Query psy2441
Match_columns 212
No_of_seqs 156 out of 1324
Neff 11.5
Searched_HMMs 29240
Date Sat Aug 17 01:01:13 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy2441.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/2441hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3b43_A Titin; I-SET IG fold, e 100.0 1.9E-28 6.6E-33 193.5 18.9 196 3-206 359-569 (570)
2 2rik_A Titin; I-SET IG fold, p 100.0 1.1E-27 3.9E-32 173.4 19.9 194 3-207 73-284 (284)
3 1qz1_A Neural cell adhesion mo 100.0 5.9E-28 2E-32 175.5 17.5 195 3-207 74-290 (291)
4 3b43_A Titin; I-SET IG fold, e 100.0 1.4E-27 4.8E-32 188.6 20.7 194 3-209 265-478 (570)
5 2wim_A N-CAM 2, NCAM2, neural 100.0 7.8E-28 2.7E-32 174.8 16.9 200 3-210 72-287 (291)
6 2yd6_A PTPRD protein; hydrolas 100.0 1.3E-26 4.6E-31 161.1 17.8 182 27-208 4-205 (212)
7 2yd1_A Tyrosine-protein phosph 99.9 1E-25 3.4E-30 156.7 21.0 176 27-208 4-201 (212)
8 3laf_A Deleted in colorectal c 99.9 1.9E-26 6.4E-31 174.7 17.5 193 3-208 189-402 (403)
9 3kld_A Contactin 4, axcam, BIG 99.9 3.6E-26 1.2E-30 172.5 17.9 191 3-207 169-383 (384)
10 2yd9_A Receptor-type tyrosine- 99.9 3.3E-26 1.1E-30 167.4 16.7 194 3-210 76-294 (304)
11 2j8h_A Titin, connectin; cardi 99.9 2.1E-25 7.3E-30 153.2 19.1 174 28-207 3-197 (197)
12 1itb_B Type 1 interleukin-1 re 99.9 1.4E-25 4.8E-30 164.8 18.0 204 3-207 74-314 (315)
13 3p3y_A Neurofascin; IG domains 99.9 9E-26 3.1E-30 171.0 17.2 194 3-207 184-403 (404)
14 3qs7_E FL cytokine receptor; i 99.9 3.4E-26 1.2E-30 174.4 13.3 193 3-211 203-418 (423)
15 2a38_A Titin; Z1Z2, structural 99.9 1.9E-25 6.4E-30 153.1 14.5 173 27-206 3-194 (194)
16 2o26_X MAST/stem cell growth f 99.9 1.8E-25 6E-30 162.5 14.7 197 3-208 69-289 (290)
17 3k0w_A Mucosa-associated lymph 99.9 2.5E-24 8.6E-29 150.3 19.9 172 27-209 16-204 (218)
18 2iep_A Muscle-specific kinase 99.9 4E-25 1.4E-29 151.1 15.5 169 27-208 5-191 (192)
19 3ejj_X Macrophage colony-stimu 99.9 5.1E-25 1.7E-29 159.8 16.4 199 3-208 63-282 (289)
20 4fqp_A Poliovirus receptor; im 99.9 2E-25 7E-30 163.9 13.9 195 3-209 91-306 (313)
21 3qs9_E FL cytokine receptor; i 99.9 2E-25 6.9E-30 174.4 14.6 190 3-208 203-415 (527)
22 1ry7_B FGFR-3, fibroblast grow 99.9 3.6E-25 1.2E-29 163.8 15.2 171 38-212 132-332 (334)
23 2y23_A Myomesin; structural pr 99.9 1.4E-25 4.8E-30 164.4 12.8 194 3-206 70-311 (312)
24 3lcy_A Titin; A-BAND, IG tande 99.9 1.3E-24 4.6E-29 149.0 16.8 169 27-207 5-196 (197)
25 2v5t_A NCAM2, N-CAM 2, neural 99.9 1.3E-24 4.4E-29 148.2 16.4 168 29-208 2-189 (189)
26 2wv3_A Neuroplastin; igcam, me 99.9 4.3E-24 1.5E-28 145.9 18.7 175 28-207 2-190 (190)
27 2yd9_A Receptor-type tyrosine- 99.9 3.8E-24 1.3E-28 156.4 19.5 178 27-207 4-201 (304)
28 3laf_A Deleted in colorectal c 99.9 1.8E-24 6.2E-29 163.8 18.3 201 3-209 94-313 (403)
29 1cs6_A Axonin-1; neural cell a 99.9 1E-24 3.6E-29 164.2 16.8 190 3-206 170-381 (382)
30 1bih_A Hemolin; insect immunit 99.9 3.8E-24 1.3E-28 161.6 19.2 184 5-205 178-394 (395)
31 2ec8_A MAST/stem cell growth f 99.9 6.2E-25 2.1E-29 171.8 15.1 198 3-209 180-413 (524)
32 3oq3_B IFN-alpha/beta binding 99.9 2.7E-24 9.1E-29 159.1 17.6 203 3-206 101-329 (329)
33 2y25_A Myomesin; structural pr 99.9 1.9E-25 6.4E-30 164.1 11.2 200 3-208 73-316 (317)
34 1e07_A Carcinoembryonic antige 99.9 7.9E-24 2.7E-28 169.3 20.9 196 3-208 354-558 (642)
35 2vr9_A Roundabout 1, ROBO; imm 99.9 1.1E-23 3.7E-28 146.8 18.4 172 27-207 7-207 (217)
36 2c5d_C AXL oncogene, tyrosine- 99.9 7.1E-24 2.4E-28 145.4 16.7 162 28-205 1-191 (195)
37 3b5h_A Cervical EMMPRIN, HAB18 99.9 1.2E-23 4E-28 143.0 17.2 165 39-208 8-184 (184)
38 1e07_A Carcinoembryonic antige 99.9 1.8E-23 6.2E-28 167.2 20.9 183 3-207 438-640 (642)
39 3mjg_X Beta-type platelet-deri 99.9 1.5E-23 5.3E-28 152.1 18.7 202 3-209 63-280 (289)
40 3p3y_A Neurofascin; IG domains 99.9 1.5E-23 5.3E-28 158.7 19.3 200 3-208 89-312 (404)
41 1epf_A NCAM, protein (neural c 99.9 1.6E-23 5.4E-28 143.1 17.3 169 29-205 2-189 (191)
42 3dmk_A DOWN syndrome cell adhe 99.9 6.7E-24 2.3E-28 173.9 17.8 202 3-209 318-528 (816)
43 2v44_A NCAM2, neural cell adhe 99.9 1.3E-23 4.5E-28 143.3 16.4 167 31-206 4-188 (189)
44 1rhf_A Tyrosine-protein kinase 99.9 3.2E-23 1.1E-27 140.6 18.0 160 29-206 2-182 (182)
45 2rik_A Titin; I-SET IG fold, p 99.9 5.5E-23 1.9E-27 148.8 19.8 173 27-209 3-193 (284)
46 2va4_A NCAM2, N-CAM 2, neural 99.9 2E-23 6.8E-28 142.6 16.4 169 29-206 2-192 (192)
47 2v9r_A Roundabout homolog 1; p 99.9 2.4E-23 8.2E-28 144.4 16.7 172 27-209 7-204 (212)
48 2nzi_A Titin; IG-domain, FNIII 99.9 3.8E-23 1.3E-27 151.1 18.6 176 28-209 3-199 (305)
49 1fnl_A Low affinity immunoglob 99.9 5.9E-23 2E-27 138.6 18.1 162 27-207 5-174 (175)
50 2ec8_A MAST/stem cell growth f 99.9 2.2E-23 7.7E-28 163.0 18.4 196 3-208 92-310 (524)
51 2jll_A NCAM2, neural cell adhe 99.9 7.4E-23 2.5E-27 154.3 20.3 171 29-208 1-195 (389)
52 2v5m_A Dscam; neurobiology SPL 99.9 1.3E-23 4.4E-28 158.4 15.8 182 4-205 178-387 (388)
53 1f2q_A High affinity immunoglo 99.9 3.1E-23 1.1E-27 140.0 16.0 164 28-210 3-174 (176)
54 3rbs_A Myomesin-1; immunoglobu 99.9 2.4E-23 8.1E-28 144.2 15.3 170 30-206 4-206 (207)
55 4fom_A Poliovirus receptor-rel 99.9 6.3E-25 2.1E-29 160.9 7.7 196 3-209 86-302 (308)
56 2ocw_A Polymeric-immunoglobuli 99.9 4.9E-23 1.7E-27 163.0 18.8 200 3-209 302-548 (585)
57 4dkd_C Macrophage colony-stimu 99.9 4.3E-24 1.5E-28 155.1 11.6 199 3-209 63-283 (292)
58 3sgj_C Human FCG3A receptor; r 99.9 1.2E-22 4.2E-27 140.3 17.8 163 28-209 6-176 (204)
59 2ifg_A High affinity nerve gro 99.9 4.8E-24 1.6E-28 158.8 11.0 193 4-207 138-345 (347)
60 3dmk_A DOWN syndrome cell adhe 99.9 2.9E-23 1E-27 170.1 16.3 194 3-208 592-810 (816)
61 3ry4_A Low affinity immunoglob 99.9 2.5E-22 8.7E-27 134.7 17.9 160 28-206 3-170 (170)
62 4fa8_A Secreted protein BARF1; 99.9 4.8E-24 1.7E-28 147.0 9.6 154 38-198 2-194 (203)
63 3ojm_B Fibroblast growth facto 99.9 6.8E-23 2.3E-27 143.8 15.5 180 27-210 13-224 (231)
64 4dep_C Interleukin-1 receptor 99.9 5E-24 1.7E-28 158.6 9.4 203 3-207 91-333 (349)
65 3kld_A Contactin 4, axcam, BIG 99.9 6.3E-23 2.2E-27 154.7 15.4 200 3-209 75-296 (384)
66 3s97_C Contactin-1; carbonic a 99.9 8.7E-23 3E-27 140.3 14.4 167 34-207 13-201 (201)
67 3rjd_A High affinity immunoglo 99.9 3.2E-22 1.1E-26 143.0 17.9 187 3-206 60-259 (262)
68 1bih_A Hemolin; insect immunit 99.9 5E-23 1.7E-27 155.5 13.7 202 3-208 74-308 (395)
69 3grw_A Fibroblast growth facto 99.9 3.2E-22 1.1E-26 141.5 16.9 181 27-211 9-222 (241)
70 1f97_A Junction adhesion molec 99.9 1E-22 3.4E-27 141.2 13.8 175 29-208 1-208 (212)
71 3u83_A Poliovirus receptor-rel 99.9 5.4E-23 1.8E-27 151.9 13.2 191 3-209 104-322 (331)
72 3v2a_R Vascular endothelial gr 99.9 2.6E-25 8.8E-30 181.0 0.0 195 3-209 525-758 (772)
73 2v5m_A Dscam; neurobiology SPL 99.9 1.7E-22 6E-27 152.3 15.4 200 3-209 77-308 (388)
74 2oz4_A Intercellular adhesion 99.9 6.6E-23 2.3E-27 147.1 12.4 174 4-207 74-264 (265)
75 1qz1_A Neural cell adhesion mo 99.9 8.2E-22 2.8E-26 143.0 17.8 172 29-207 2-193 (291)
76 3qs7_E FL cytokine receptor; i 99.9 1.6E-22 5.3E-27 154.3 13.8 193 3-208 115-324 (423)
77 3p2t_A Leukocyte immunoglobuli 99.9 4.2E-22 1.4E-26 136.8 14.5 172 28-206 4-195 (196)
78 1cs6_A Axonin-1; neural cell a 99.9 1.6E-22 5.4E-27 152.3 12.9 196 3-208 74-294 (382)
79 2rcj_C Light chain; immunoglob 99.9 1.1E-21 3.6E-26 153.5 17.6 199 3-204 82-313 (523)
80 3rjd_A High affinity immunoglo 99.9 2.5E-21 8.7E-26 138.3 18.1 160 29-208 1-168 (262)
81 2r15_A Myomesin-1; sarcomeric 99.9 3.1E-21 1.1E-25 133.7 18.0 162 42-208 15-211 (212)
82 1nbq_A JAM, junctional adhesio 99.9 2.9E-22 9.9E-27 138.6 12.3 174 28-206 3-208 (209)
83 3o4o_C Interleukin-1 receptor 99.9 1.2E-23 4.2E-28 156.0 5.6 198 3-204 93-332 (339)
84 2d3v_A Leukocyte immunoglobuli 99.9 4.9E-22 1.7E-26 136.4 13.2 160 28-194 4-180 (196)
85 1ugn_A LIR1, leukocyte immunog 99.9 1.8E-21 6.2E-26 133.8 15.9 172 28-206 4-197 (198)
86 3r4d_A CEA-related cell adhesi 99.9 2.5E-21 8.6E-26 133.9 16.7 170 33-209 3-202 (208)
87 2wng_A Tyrosine-protein phosph 99.9 2.1E-22 7.1E-27 148.7 11.8 193 3-199 86-312 (327)
88 1z7z_I Intercellular adhesion 99.9 2.3E-22 7.8E-27 154.5 12.0 175 3-207 256-449 (450)
89 2rcj_C Light chain; immunoglob 99.9 1.8E-21 6.2E-26 152.2 16.8 194 3-198 190-412 (523)
90 2wim_A N-CAM 2, NCAM2, neural 99.9 2.7E-21 9.2E-26 140.3 16.4 171 28-207 3-191 (291)
91 3qs9_E FL cytokine receptor; i 99.9 4.2E-22 1.4E-26 155.7 12.8 190 3-208 302-511 (527)
92 1uct_A Immunoglobulin alpha FC 99.9 4.2E-21 1.4E-25 133.9 16.0 172 27-209 7-200 (218)
93 1qgc_4 Protein (immunoglobulin 99.9 4.8E-21 1.6E-25 146.6 17.5 189 3-194 87-321 (438)
94 1wio_A CD4, T-cell surface gly 99.9 1.8E-21 6.3E-26 145.6 14.1 189 3-206 79-292 (363)
95 1z7z_I Intercellular adhesion 99.9 1E-20 3.6E-25 145.3 18.2 195 3-211 61-286 (450)
96 3vh8_G Killer cell immunoglobu 99.9 2.4E-21 8.1E-26 142.4 13.9 198 3-209 86-315 (316)
97 1sy6_A T-cell surface glycopro 99.9 8.5E-21 2.9E-25 131.0 13.9 157 41-206 15-203 (204)
98 1oll_A NK receptor; immune sys 99.9 3E-20 1E-24 126.7 16.4 167 28-206 3-187 (188)
99 2c1o_A IGK-C protein; FAB frag 99.9 6.6E-21 2.3E-25 135.8 13.5 186 3-196 16-245 (254)
100 2fbo_J V1V2;, variable region- 99.9 8.3E-21 2.8E-25 134.8 13.8 170 33-205 6-248 (250)
101 2gi7_A GPVI protein; IG-like d 99.9 7.6E-21 2.6E-25 129.2 11.9 155 27-194 6-168 (184)
102 2ny1_B T-cell surface glycopro 99.9 1.7E-20 5.9E-25 127.4 13.4 149 38-210 4-182 (184)
103 1jbj_A CD3 epsilon and gamma e 99.9 6.6E-20 2.2E-24 124.8 16.1 144 39-196 9-179 (186)
104 2x1w_L Vascular endothelial gr 99.9 2E-20 6.7E-25 130.1 13.6 170 35-209 13-209 (213)
105 3jz7_A MCAR, CAR, coxsackievir 99.8 4.6E-21 1.6E-25 132.9 10.0 161 34-206 5-211 (214)
106 4f80_A Butyrophilin subfamily 99.8 2E-20 6.8E-25 131.1 13.2 170 36-209 11-215 (226)
107 3knb_A Titin; IG-like, titin, 99.8 1.6E-20 5.5E-25 114.8 10.4 95 112-207 5-99 (100)
108 3bp6_B Programmed cell death 1 99.8 1.7E-20 5.8E-25 129.2 11.6 166 33-211 6-197 (202)
109 3o4o_C Interleukin-1 receptor 99.8 3.5E-20 1.2E-24 137.4 13.6 170 27-207 16-220 (339)
110 3knb_B Obscurin-like protein 1 99.8 3.4E-20 1.2E-24 114.7 10.0 94 112-208 13-106 (107)
111 1qgc_4 Protein (immunoglobulin 99.8 1.4E-20 4.8E-25 144.0 9.5 190 3-199 193-432 (438)
112 1p6f_A NKP46, natural cytotoxi 99.8 6.8E-19 2.3E-23 124.5 17.1 170 27-208 5-192 (242)
113 2y25_A Myomesin; structural pr 99.8 7.2E-21 2.5E-25 139.6 7.1 174 27-205 5-198 (317)
114 1vca_A VCAM-D1,2, human vascul 99.8 1.5E-19 5E-24 124.7 13.1 158 32-196 3-180 (202)
115 4frw_A Poliovirus receptor-rel 99.8 8.5E-20 2.9E-24 126.6 11.7 170 34-207 4-211 (218)
116 1ry7_B FGFR-3, fibroblast grow 99.8 2.4E-20 8.3E-25 137.9 8.5 171 35-208 14-217 (334)
117 4i0k_A CD276 antigen; immunogl 99.8 6.8E-20 2.3E-24 127.9 10.2 169 37-211 3-210 (222)
118 1nkr_A P58-CL42 KIR; inhibitor 99.8 4.2E-19 1.4E-23 122.2 14.0 170 27-205 6-200 (201)
119 1wio_A CD4, T-cell surface gly 99.8 9.5E-20 3.2E-24 136.3 11.1 159 3-192 154-350 (363)
120 1igt_B IGG2A intact antibody - 99.8 1.4E-19 4.8E-24 138.9 12.1 194 3-197 91-332 (444)
121 3vh8_G Killer cell immunoglobu 99.8 1.8E-18 6.3E-23 127.0 17.4 174 27-207 22-215 (316)
122 2ghw_B Anti-SARS SCFV antibody 99.8 3.5E-18 1.2E-22 121.2 18.1 174 37-210 10-245 (247)
123 2ocw_A Polymeric-immunoglobuli 99.8 2.4E-18 8.1E-23 136.3 18.7 194 3-208 197-442 (585)
124 2o26_X MAST/stem cell growth f 99.8 6.1E-19 2.1E-23 128.0 13.1 166 27-206 10-182 (290)
125 3sbw_C Programmed cell death 1 99.8 7.1E-19 2.4E-23 122.7 12.8 165 35-209 7-213 (222)
126 3d9a_L Light chain of hyhel10 99.8 4.2E-19 1.4E-23 123.2 11.3 161 32-196 4-203 (213)
127 3oq3_B IFN-alpha/beta binding 99.8 4.4E-19 1.5E-23 131.1 11.9 152 37-196 37-210 (329)
128 1hng_A CD2; T lymphocyte adhes 99.8 1.7E-19 5.7E-24 121.7 8.8 146 38-205 5-174 (176)
129 3v2a_R Vascular endothelial gr 99.8 3.7E-20 1.3E-24 150.8 6.5 182 3-198 195-409 (772)
130 1b6u_A KIR2DL3, P58 killer cel 99.8 1.8E-18 6.2E-23 123.3 14.4 173 27-208 5-202 (257)
131 3mj8_L Stimulatory hamster ant 99.8 5.1E-19 1.7E-23 122.8 10.4 165 30-199 2-206 (213)
132 3mj6_A Junctional adhesion mol 99.8 1.5E-18 5E-23 124.5 13.0 173 29-210 5-240 (268)
133 2wng_A Tyrosine-protein phosph 99.8 1.2E-18 4E-23 128.6 12.8 161 29-196 3-206 (327)
134 2pet_A Lutheran blood group gl 99.8 9.4E-19 3.2E-23 122.8 11.7 158 35-192 6-211 (231)
135 2wqr_A IG epsilon chain C regi 99.8 4.6E-19 1.6E-23 130.6 10.4 192 3-195 84-309 (323)
136 4dep_C Interleukin-1 receptor 99.8 8.5E-18 2.9E-22 125.0 16.8 162 36-207 14-217 (349)
137 1itb_B Type 1 interleukin-1 re 99.8 1.7E-18 5.7E-23 127.0 12.5 157 36-197 12-190 (315)
138 1lk3_L 9D7 light chain; antige 99.8 7.1E-18 2.4E-22 116.8 14.4 160 32-196 4-202 (210)
139 3uzq_A Anti-dengue MAB 4E11; d 99.8 3E-18 1E-22 122.0 12.8 177 33-209 5-246 (253)
140 1nqb_A Single-chain antibody f 99.8 1E-17 3.5E-22 119.5 15.3 171 35-208 6-234 (256)
141 1igt_B IGG2A intact antibody - 99.8 1.1E-18 3.8E-23 133.9 10.9 188 4-193 196-432 (444)
142 2y23_A Myomesin; structural pr 99.8 4.6E-17 1.6E-21 119.0 19.0 153 38-194 10-190 (312)
143 3umt_A SCFV heavy chain and li 99.8 3.1E-17 1E-21 117.0 17.0 175 36-210 9-248 (256)
144 2p1y_A Bispecific alpha/beta T 99.8 2E-17 7E-22 116.6 15.9 162 31-193 2-222 (238)
145 1za6_B IGG heavy chain; immuno 99.8 1.3E-18 4.4E-23 129.3 9.7 191 3-195 91-330 (344)
146 1qok_A MFE-23 recombinant anti 99.8 2.6E-17 9E-22 119.1 15.9 176 33-209 30-270 (282)
147 1hzh_H IGG, immunoglobulin hea 99.8 2.7E-18 9.4E-23 132.2 11.3 191 4-195 206-443 (457)
148 3nl4_L Antigen binding fragmen 99.8 8.3E-18 2.8E-22 116.6 12.6 157 30-190 2-198 (213)
149 3juy_B 3B3 single chain varian 99.8 2.6E-17 8.7E-22 117.4 15.4 179 28-206 5-256 (256)
150 2cqv_A MLCK, myosin light chai 99.8 1.2E-17 4E-22 104.6 11.9 96 112-210 7-102 (114)
151 2zg1_A Sialic acid-binding IG- 99.8 1.6E-17 5.5E-22 115.2 13.7 158 33-206 4-212 (214)
152 1nfd_E H57 FAB; complex (immun 99.8 1.3E-18 4.5E-23 120.6 7.6 162 32-198 3-204 (212)
153 1q0x_L FAB 9B1, light chain; a 99.8 7.1E-18 2.4E-22 116.9 11.1 161 32-196 4-205 (212)
154 3r06_A Anti-mouse CD3epsilon a 99.8 1.5E-17 5.2E-22 115.3 12.8 163 30-196 2-203 (213)
155 1f3r_B FV antibody fragment; I 99.8 1E-17 3.5E-22 119.6 12.0 171 36-207 7-245 (257)
156 3tf7_C 42F3 MUT7 SCFV (42F3 al 99.8 1.5E-16 5E-21 113.5 17.9 177 30-207 4-248 (256)
157 1hzh_H IGG, immunoglobulin hea 99.8 1.7E-17 5.8E-22 127.8 14.0 190 3-196 91-340 (457)
158 4fmk_A Poliovirus receptor-rel 99.7 1.7E-17 5.7E-22 115.5 12.0 167 36-208 8-218 (225)
159 3s96_B 3B5H10 FAB light chain; 99.7 8.3E-18 2.8E-22 117.0 10.4 164 30-197 2-211 (218)
160 3gkz_A Anti-methamphetamine si 99.7 2.2E-16 7.4E-21 112.7 17.9 175 34-208 13-250 (257)
161 2if7_A SLAM family member 6; N 99.7 2.6E-17 8.8E-22 112.6 12.5 145 35-198 4-184 (193)
162 3esu_F Antibody 14B7* light ch 99.7 9.9E-17 3.4E-21 113.9 15.7 162 30-191 5-231 (250)
163 3ejj_X Macrophage colony-stimu 99.7 9.9E-17 3.4E-21 116.1 15.9 168 28-207 3-181 (289)
164 1igy_B IGG1 intact antibody MA 99.7 1.9E-19 6.6E-24 137.7 1.6 192 3-196 90-321 (434)
165 3qp3_A Titin; I-SET IG-like, s 99.7 2.1E-17 7.3E-22 101.5 10.4 93 113-208 9-101 (103)
166 3pv7_A B7-H6, IG-like domain-c 99.7 2.3E-17 8E-22 117.0 12.1 165 34-206 8-225 (248)
167 3auv_A SC-DSFV derived from th 99.7 1.6E-16 5.5E-21 114.6 16.4 180 28-207 11-254 (276)
168 2edj_A Roundabout homolog 2; K 99.7 3.9E-17 1.3E-21 99.7 11.2 93 111-208 7-99 (100)
169 1u2h_A APEG-1, aortic preferen 99.7 2.4E-17 8.1E-22 100.5 10.2 93 113-207 6-98 (99)
170 2oz4_A Intercellular adhesion 99.7 4.1E-17 1.4E-21 116.9 12.8 149 39-208 13-183 (265)
171 4dkd_C Macrophage colony-stimu 99.7 2.3E-17 7.8E-22 119.6 11.5 168 28-207 3-181 (292)
172 2kdg_A Myotilin; immonoglobuli 99.7 4.3E-17 1.5E-21 99.5 11.0 94 113-208 6-99 (100)
173 3tv3_L PGT128 light chain, IG 99.7 4.6E-18 1.6E-22 117.8 7.3 161 32-198 4-203 (211)
174 3sob_L Antibody light chain; b 99.7 5.5E-17 1.9E-21 114.2 12.8 166 28-197 23-227 (237)
175 2xzc_L FAB A.17 light chain; i 99.7 5.3E-17 1.8E-21 112.8 12.6 157 36-196 7-205 (216)
176 1dr9_A B7-1 (CD80), T lymphocy 99.7 7.4E-17 2.5E-21 110.8 13.1 154 38-198 3-193 (201)
177 3omz_A Human vdelta1 gamma del 99.7 1.4E-16 4.8E-21 113.8 15.0 182 29-210 2-253 (259)
178 3irg_A Titin; IG-like, titin, 99.7 4.2E-17 1.4E-21 99.5 10.4 94 113-207 6-99 (100)
179 3bkj_L WO2 IGG2A FAB fragment 99.7 7.4E-17 2.5E-21 114.8 13.2 165 28-196 33-241 (252)
180 2rgs_A I, IG gamma-2B heavy ch 99.7 1.6E-17 5.6E-22 115.7 9.4 168 28-196 8-206 (218)
181 1g1c_A Immunoglobulin-like dom 99.7 5E-17 1.7E-21 99.0 10.4 92 113-207 6-98 (99)
182 1igy_B IGG1 intact antibody MA 99.7 1.7E-18 5.9E-23 132.5 4.5 189 4-195 192-424 (434)
183 1iga_A IGA1; immunoglobulin; N 99.7 2.5E-16 8.6E-21 121.9 16.6 194 3-199 92-338 (475)
184 2dm2_A Palladin; beta-sandwich 99.7 6.7E-17 2.3E-21 100.4 10.9 98 111-210 7-105 (110)
185 1wit_A Twitchin 18TH IGSF modu 99.7 4.1E-17 1.4E-21 98.3 9.4 89 113-206 3-93 (93)
186 3puc_A Titin; I-SET IG-like do 99.7 7E-17 2.4E-21 98.4 10.4 92 113-207 7-98 (99)
187 2eo9_A Roundabout homolog 1; b 99.7 4E-17 1.4E-21 102.8 9.4 95 112-211 8-102 (118)
188 3qib_D 2B4 beta chain; IG doma 99.7 7E-17 2.4E-21 116.0 11.7 182 3-195 8-244 (270)
189 1c1e_H Catalytic antibody 1E9 99.7 2.4E-17 8.1E-22 114.8 8.7 158 35-198 6-212 (219)
190 2vol_A Murine IGG FC; FC, zinc 99.7 9E-17 3.1E-21 111.1 11.5 161 34-195 7-197 (207)
191 2kkq_A Myotilin; unknown funct 99.7 1.3E-16 4.5E-21 100.0 11.2 97 112-210 15-112 (116)
192 3irg_B Obscurin-like protein 1 99.7 7.5E-17 2.6E-21 99.7 10.0 94 112-208 13-106 (107)
193 2znx_A SCFV; fluorotryptohpan, 99.7 3.5E-16 1.2E-20 110.6 14.6 166 31-196 3-228 (242)
194 4fqp_A Poliovirus receptor; im 99.7 1.2E-16 4.1E-21 117.2 12.2 170 33-208 4-214 (313)
195 2yuz_A Myosin-binding protein 99.7 1.7E-16 5.8E-21 96.8 10.7 92 112-210 7-98 (100)
196 2j6e_L IGM, FAB light chain; a 99.7 4.2E-17 1.4E-21 114.6 9.1 164 30-197 21-226 (234)
197 1moe_A Anti-CEA MAB T84.66; an 99.7 1.4E-15 4.8E-20 107.3 16.9 160 31-191 3-219 (240)
198 1iga_A IGA1; immunoglobulin; N 99.7 9.5E-16 3.2E-20 118.6 17.2 191 3-195 202-443 (475)
199 4dzb_B Vbeta2 (MAIT T cell rec 99.7 1.7E-16 5.7E-21 112.5 11.9 164 31-197 3-222 (246)
200 3u83_A Poliovirus receptor-rel 99.7 1.8E-16 6.1E-21 116.9 12.4 169 28-207 13-230 (331)
201 2dm3_A KIAA0992 protein, palla 99.7 4.9E-17 1.7E-21 101.0 8.0 98 112-211 9-106 (110)
202 2bk8_A Connectin, M1, titin he 99.7 3.2E-16 1.1E-20 95.1 11.4 91 116-209 5-96 (97)
203 1zvo_C Myeloma immunoglobulin 99.7 3.8E-15 1.3E-19 116.3 20.1 165 29-196 296-493 (512)
204 1q9r_B S25-2 FAB (IGG1K) heavy 99.7 1.2E-16 4.1E-21 111.5 10.3 158 36-199 7-216 (222)
205 1l6x_A Immunoglobulin gamma-1 99.7 7.4E-17 2.5E-21 111.5 9.0 166 30-195 2-197 (207)
206 2nzi_A Titin; IG-domain, FNIII 99.7 5.5E-17 1.9E-21 118.3 8.6 175 3-199 74-283 (305)
207 1svz_A Immunoglobulin;, single 99.7 2E-15 6.8E-20 107.0 16.4 162 31-192 3-228 (247)
208 3kvq_A Vascular endothelial gr 99.7 1.8E-16 6.2E-21 98.1 9.7 94 112-210 10-103 (108)
209 4acp_A IG gamma-1 chain C regi 99.7 8.9E-17 3E-21 113.4 9.1 186 4-193 1-216 (240)
210 1nct_A Titin; cell adhesion, g 99.7 5.9E-17 2E-21 100.0 7.0 92 112-206 14-105 (106)
211 2e7c_A Myosin-binding protein 99.7 4.8E-16 1.6E-20 97.8 11.2 87 119-209 31-117 (118)
212 3bqu_C 3H6 FAB light chain; be 99.7 1.5E-17 5E-22 117.0 4.6 164 28-195 22-224 (233)
213 1ccz_A Protein (CD58); LFA-3, 99.7 1.4E-16 4.7E-21 106.8 9.0 143 38-203 4-167 (171)
214 3ux9_B SCFV antibody; five hel 99.7 9.4E-16 3.2E-20 109.3 13.8 156 36-192 9-235 (256)
215 2gjj_A A21 single-chain antibo 99.7 2.7E-15 9.3E-20 107.4 16.2 164 29-192 5-239 (264)
216 3d9a_H Heavy chain of hyhel10 99.7 2.2E-16 7.6E-21 109.2 10.2 157 36-198 7-206 (210)
217 2jll_A NCAM2, neural cell adhe 99.7 1.5E-15 5E-20 114.4 15.4 186 3-199 75-281 (389)
218 1mju_H Immunoglobulin MS6-12; 99.7 2.6E-16 8.9E-21 110.3 10.2 169 35-211 6-219 (227)
219 2yr3_A Myosin light chain kina 99.7 1.8E-16 6.1E-21 96.6 7.9 88 113-206 12-99 (99)
220 3fku_X Neutralizing antibody F 99.7 2.2E-15 7.5E-20 108.9 14.9 175 31-207 3-250 (280)
221 1pz5_B Heavy chain of FAB (SYA 99.7 4.2E-16 1.5E-20 108.6 10.6 154 36-198 7-213 (220)
222 1waa_A Titin; metal binding pr 99.7 1.1E-15 3.6E-20 91.9 10.7 88 112-207 5-92 (93)
223 1x9q_A SCFV, 4M5.3 anti-fluore 99.7 1.5E-15 5.2E-20 109.0 13.5 166 27-192 13-254 (268)
224 2ckn_A Basic fibroblast growth 99.7 8.6E-16 2.9E-20 92.8 10.3 87 111-205 8-94 (95)
225 4fom_A Poliovirus receptor-rel 99.7 8.1E-16 2.8E-20 112.4 12.1 167 37-209 7-210 (308)
226 3bfo_A Mucosa-associated lymph 99.7 1.1E-15 3.9E-20 91.5 10.6 84 113-207 4-87 (91)
227 2gki_A Nuclease; anti-DNA anti 99.7 1E-15 3.5E-20 111.2 12.3 173 35-207 28-272 (291)
228 2lu7_A Obscurin-like protein 1 99.7 8.9E-16 3E-20 90.3 9.8 81 120-208 4-84 (84)
229 3eow_R Poliovirus receptor; im 99.7 7.1E-16 2.4E-20 107.5 10.8 166 36-208 6-211 (221)
230 2wqr_A IG epsilon chain C regi 99.7 1.9E-16 6.4E-21 116.7 7.8 166 28-195 6-203 (323)
231 1gxe_A Myosin binding protein 99.7 2.7E-16 9.4E-21 101.4 7.4 86 119-206 25-138 (139)
232 4ei6_B Vbeta16 XV19 type II na 99.7 3.8E-15 1.3E-19 105.4 13.9 162 30-195 3-219 (245)
233 3nfj_J T cell receptor beta ch 99.6 1.4E-15 4.7E-20 107.7 11.1 163 31-196 3-220 (245)
234 1i1c_A IGG2A, IG gamma-2A chai 99.6 5.3E-16 1.8E-20 109.5 8.8 166 29-195 15-211 (239)
235 3cx2_A Myosin-binding protein 99.6 3.6E-15 1.2E-19 92.2 11.6 93 113-206 5-107 (108)
236 1hnf_A CD2; T lymphocyte adhes 99.6 2.2E-15 7.4E-20 101.9 11.2 142 36-203 6-177 (182)
237 1fhg_A Telokin; immunoglobulin 99.6 2.6E-15 8.8E-20 98.9 11.2 94 113-209 42-136 (154)
238 1za6_B IGG heavy chain; immuno 99.6 5.1E-16 1.7E-20 115.3 8.5 157 35-196 6-207 (344)
239 3pl6_D MBP peptide / T-cell re 99.6 3.3E-15 1.1E-19 107.2 12.3 163 29-195 26-241 (268)
240 1x44_A Myosin-binding protein 99.6 2E-15 6.8E-20 92.6 9.6 93 113-211 8-100 (103)
241 2dav_A SLOW MYBP-C, myosin-bin 99.6 1.6E-15 5.3E-20 95.5 9.1 94 113-207 8-111 (126)
242 3q5y_A TCR N15 beta; IG, T cel 99.6 4.4E-15 1.5E-19 104.8 12.4 163 31-195 4-213 (240)
243 2fbj_H IGA-kappa J539 FAB (hea 99.6 5E-15 1.7E-19 103.2 12.4 157 36-197 7-212 (220)
244 2e6p_A Obscurin-like protein 1 99.6 3E-15 1E-19 91.9 10.0 92 112-211 7-101 (104)
245 1dn0_B IGM-kappa cold agglutin 99.6 1.5E-14 5E-19 101.7 14.6 166 36-207 7-227 (232)
246 3caf_A Fibroblast growth facto 99.6 2.2E-15 7.6E-20 91.8 8.6 83 120-205 16-99 (100)
247 2wbj_D OB TCR; transmembrane, 99.6 4E-15 1.4E-19 107.4 11.3 167 29-196 24-246 (279)
248 2w59_A IGY FCU3-4; immunoglobu 99.6 1.9E-15 6.5E-20 106.2 9.3 167 28-195 11-217 (231)
249 1op3_H FAB 2G12, heavy chain; 99.6 3.1E-15 1.1E-19 104.6 10.2 155 36-196 7-215 (225)
250 2v5y_A Receptor-type tyrosine- 99.6 4.9E-15 1.7E-19 120.3 12.9 163 45-211 92-264 (731)
251 2dru_A Chimera of CD48 antigen 99.6 7.7E-15 2.6E-19 99.1 11.6 137 37-199 7-174 (180)
252 1wwb_X Protein (brain derived 99.6 3.9E-15 1.3E-19 91.3 9.0 85 125-210 14-101 (103)
253 3mtr_A N-CAM-1, NCAM-1, neural 99.6 4.4E-15 1.5E-19 103.1 10.4 173 27-208 17-210 (215)
254 1dee_B IGM RF 2A2; FAB-IBP com 99.6 3.6E-14 1.2E-18 99.1 15.1 156 36-199 7-220 (223)
255 2edf_A Obscurin; beta-sandwich 99.6 2.1E-15 7.2E-20 92.5 7.8 92 112-211 8-99 (103)
256 1mq8_A ICAM-1, intercellular a 99.6 1.2E-16 4E-21 115.5 2.4 192 4-211 61-286 (291)
257 2xqy_G A13-D6.3 monoclonal ant 99.6 3.4E-15 1.2E-19 106.7 9.8 157 34-196 11-215 (261)
258 1he7_A High affinity nerve gro 99.6 4E-15 1.4E-19 93.5 8.8 82 126-208 14-100 (126)
259 2edk_A Myosin-binding protein 99.6 2.1E-15 7.2E-20 92.2 7.2 91 112-208 8-100 (101)
260 2edn_A Myosin-binding protein 99.6 6.3E-15 2.1E-19 91.7 9.2 95 113-208 13-117 (118)
261 2dlt_A Myosin binding protein 99.6 3.5E-15 1.2E-19 91.9 8.1 90 112-207 8-97 (106)
262 2lvc_A Obscurin-like protein 1 99.6 3.2E-15 1.1E-19 89.3 7.4 77 113-192 5-83 (91)
263 2eny_A Obscurin; beta-sandwich 99.6 6E-15 2E-19 90.6 8.6 92 112-210 8-100 (104)
264 2k1m_A Myosin-binding protein 99.6 2.3E-14 7.7E-19 86.5 10.9 86 113-206 9-94 (95)
265 2v9t_A Roundabout homolog 1; s 99.6 4.8E-15 1.6E-19 93.0 8.0 94 112-208 9-110 (117)
266 2ens_A Advanced glycosylation 99.6 3.2E-15 1.1E-19 90.4 6.7 86 110-206 8-94 (96)
267 3to4_D NKT vbeta2 (mouse varia 99.6 2.9E-14 1E-18 101.4 12.8 160 33-193 5-217 (253)
268 3bae_H WO2 IGG2A FAB fragment 99.6 1.1E-14 3.7E-19 102.0 10.3 157 36-198 7-218 (228)
269 3o3u_N Maltose-binding peripla 99.6 1.7E-14 5.8E-19 114.2 12.6 157 37-196 374-567 (581)
270 2e7b_A Obscurin; IG-like domai 99.6 2.2E-14 7.5E-19 87.9 10.2 91 112-210 8-98 (103)
271 2dku_A KIAA1556 protein; beta- 99.6 3.3E-14 1.1E-18 87.1 11.0 92 112-211 8-99 (103)
272 3nl4_H Antigen binding fragmen 99.6 1.2E-14 4.2E-19 100.8 9.8 158 34-199 4-207 (215)
273 1gsm_A Madcam-1, mucosal addre 99.6 2.4E-13 8.1E-18 93.3 15.8 147 39-196 17-195 (210)
274 2yuv_A Myosin-binding protein 99.6 1.8E-14 6E-19 87.8 9.2 90 112-209 7-97 (100)
275 3m8o_H Immunoglobulin A1 heavy 99.6 1.4E-13 4.7E-18 95.9 14.9 151 36-196 7-213 (221)
276 2cr3_A Basic fibroblast growth 99.6 1E-14 3.4E-19 88.8 7.8 84 118-209 9-92 (99)
277 1hxm_B Gamma-delta T-cell rece 99.6 1E-13 3.5E-18 98.0 14.0 172 30-205 2-227 (242)
278 3mjg_X Beta-type platelet-deri 99.6 6.8E-15 2.3E-19 106.5 8.1 160 31-207 2-178 (289)
279 2edh_A Obscurin; structural ge 99.6 4.6E-14 1.6E-18 87.9 10.8 90 113-211 20-109 (113)
280 1zvo_C Myeloma immunoglobulin 99.6 2.4E-13 8.3E-18 106.1 17.3 76 122-197 307-388 (512)
281 3mtr_A N-CAM-1, NCAM-1, neural 99.6 2.5E-14 8.6E-19 99.2 10.2 95 113-209 20-114 (215)
282 3liz_H 4C3 monoclonal antibody 99.6 8.3E-14 2.8E-18 99.1 12.9 161 36-206 7-219 (253)
283 2cry_A KIN of IRRE-like protei 99.6 3.3E-16 1.1E-20 99.1 0.3 94 113-208 15-114 (122)
284 1c5d_H Monoclonal antibody aga 99.6 9.4E-14 3.2E-18 96.4 12.5 154 36-197 7-207 (215)
285 2aty_A Complement receptor chi 99.6 6.7E-14 2.3E-18 105.2 12.5 161 34-194 172-361 (376)
286 4hwu_A Fibroblast growth facto 99.5 6.8E-14 2.3E-18 84.3 9.9 83 118-209 7-89 (95)
287 2cpc_A KIAA0657 protein; immun 99.5 1E-13 3.4E-18 86.3 10.9 82 122-211 23-104 (113)
288 1pd6_A Cardiac MYBP-C;, myosin 99.5 8.5E-14 2.9E-18 85.3 10.2 87 113-206 16-103 (104)
289 2cr6_A KIAA1556 protein, obscu 99.5 3.7E-14 1.3E-18 88.7 8.7 90 113-209 14-104 (115)
290 2a38_A Titin; Z1Z2, structural 99.5 4.8E-14 1.6E-18 96.0 9.9 95 112-207 5-99 (194)
291 2e6q_A Obscurin-like protein 1 99.5 1.2E-13 4.2E-18 85.3 10.7 92 113-210 9-108 (112)
292 3m45_A Cell adhesion molecule 99.5 8.9E-14 3E-18 85.7 10.2 94 113-208 7-107 (108)
293 2dm7_A KIAA1556 protein; beta- 99.5 9.4E-14 3.2E-18 85.8 10.2 90 111-209 7-96 (108)
294 3bn9_D E2 FAB heavy chain; ant 99.5 2.8E-14 9.7E-19 101.7 8.7 156 36-196 7-220 (257)
295 1gl4_B Basement membrane-speci 99.5 5E-14 1.7E-18 85.4 8.1 82 118-207 16-98 (98)
296 2j8h_A Titin, connectin; cardi 99.5 2.5E-13 8.6E-18 92.7 12.3 95 112-208 4-99 (197)
297 3so5_A LIG-3, leucine-rich rep 99.5 1.4E-13 4.8E-18 85.3 9.8 94 112-205 10-111 (112)
298 1wwc_A Protein (NT-3 growth fa 99.5 1.2E-13 4E-18 86.7 9.4 80 128-208 21-102 (118)
299 3lcy_A Titin; A-BAND, IG tande 99.5 2.8E-13 9.5E-18 92.3 11.6 95 112-209 7-101 (197)
300 3qhz_H Human monoclonal antibo 99.5 1.8E-13 6.1E-18 96.1 9.9 164 36-205 7-227 (232)
301 3tv3_H PGT128 heavy chain, IG 99.5 4.3E-13 1.5E-17 94.6 11.4 164 36-205 7-235 (239)
302 2c5d_C AXL oncogene, tyrosine- 99.5 4.6E-13 1.6E-17 91.3 11.2 97 112-208 2-106 (195)
303 3s35_X Vascular endothelial gr 99.5 3.2E-13 1.1E-17 85.2 9.6 88 121-209 17-112 (122)
304 1bec_A 14.3.D T cell antigen r 99.5 6.7E-13 2.3E-17 93.5 12.0 160 32-193 2-210 (238)
305 1iam_A ICAM-1, CD54, intercell 99.5 2.7E-12 9.1E-17 86.3 14.2 154 32-196 2-168 (185)
306 2yd1_A Tyrosine-protein phosph 99.5 1.1E-12 3.8E-17 90.6 12.8 96 111-208 5-103 (212)
307 1oga_E TRBC1, T-cell receptor 99.5 4.8E-13 1.7E-17 95.0 11.0 162 31-196 5-219 (252)
308 2iep_A Muscle-specific kinase 99.5 3.6E-13 1.2E-17 91.5 9.9 94 112-208 7-100 (192)
309 2eo1_A OBSCN protein, cDNA FLJ 99.5 6.3E-13 2.1E-17 81.1 9.7 81 120-208 19-99 (102)
310 1ow0_A IG alpha-1 chain C regi 99.5 6.2E-14 2.1E-18 97.3 5.5 165 29-195 3-200 (214)
311 3u2s_H PG9 heavy chain; greek 99.5 9.4E-13 3.2E-17 93.4 11.6 166 34-205 4-236 (248)
312 2yd6_A PTPRD protein; hydrolas 99.5 6.1E-13 2.1E-17 92.0 10.4 93 113-207 7-100 (212)
313 1rhf_A Tyrosine-protein kinase 99.5 5.3E-13 1.8E-17 89.9 9.9 96 113-208 3-98 (182)
314 3rbg_A Cytotoxic and regulator 99.5 5.8E-13 2E-17 84.3 9.3 92 116-209 5-103 (124)
315 3qr2_A Basigin; CD147, EMMPRIN 99.5 9.9E-14 3.4E-18 89.4 5.7 87 111-197 20-117 (137)
316 2v5t_A NCAM2, N-CAM 2, neural 99.5 9.1E-13 3.1E-17 89.2 10.7 93 113-208 3-96 (189)
317 3shs_A HOC head outer capsid p 99.4 1.2E-11 4.2E-16 86.5 15.8 158 30-206 3-182 (304)
318 1ypz_F T-cell receptor gamma c 99.4 4.7E-12 1.6E-16 88.7 13.6 161 32-197 4-218 (230)
319 2va4_A NCAM2, N-CAM 2, neural 99.4 1.8E-12 6.3E-17 87.9 10.7 91 113-208 3-95 (192)
320 3n9g_H FAB fragment of MAB CR4 99.4 1.5E-12 5E-17 91.3 10.2 165 36-207 7-225 (230)
321 1z9m_A GAPA225; nectin-like, I 99.4 2.6E-12 9E-17 83.5 9.8 89 116-209 42-140 (145)
322 2vr9_A Roundabout 1, ROBO; imm 99.4 1.3E-12 4.6E-17 90.4 8.9 98 111-208 8-107 (217)
323 1mq8_A ICAM-1, intercellular a 99.4 1.2E-11 4E-16 89.4 12.6 152 33-195 3-167 (291)
324 3zyj_A Leucine-rich repeat-con 99.4 3.1E-12 1E-16 98.1 10.1 95 112-211 341-437 (440)
325 1jhl_L IGG1-kappa D11.15 FV (l 99.4 8.7E-12 3E-16 76.9 10.3 90 117-206 6-107 (108)
326 2v44_A NCAM2, neural cell adhe 99.4 8.2E-12 2.8E-16 84.6 10.8 91 115-208 5-96 (189)
327 3uto_A Twitchin; kinase, muscl 99.4 5.7E-12 1.9E-16 99.4 11.2 90 113-205 483-572 (573)
328 2id5_A Lingo-1, leucine rich r 99.4 1.9E-12 6.3E-17 100.3 8.0 84 119-206 392-476 (477)
329 3r08_E T-cell surface glycopro 99.4 3.6E-13 1.2E-17 77.8 3.1 60 119-191 6-66 (82)
330 3ojm_B Fibroblast growth facto 99.4 3.9E-12 1.3E-16 88.7 8.9 86 120-208 27-113 (231)
331 3zyi_A Leucine-rich repeat-con 99.3 3.2E-12 1.1E-16 98.3 8.3 94 112-211 352-447 (452)
332 3k0w_A Mucosa-associated lymph 99.3 1.2E-11 4.1E-16 85.9 10.4 85 113-208 19-103 (218)
333 3rbs_A Myomesin-1; immunoglobu 99.3 1.3E-11 4.3E-16 85.2 10.4 84 113-199 4-88 (207)
334 1epf_A NCAM, protein (neural c 99.3 1.7E-11 5.8E-16 83.1 11.0 94 113-207 3-99 (191)
335 3p2t_A Leukocyte immunoglobuli 99.3 3.6E-12 1.2E-16 87.0 7.5 90 113-207 6-96 (196)
336 3sob_H Antibody heavy chain, l 99.3 2.6E-11 8.9E-16 86.3 12.2 164 37-207 31-251 (256)
337 1ypz_E T cell receptor delta, 99.3 4.6E-11 1.6E-15 82.3 13.1 152 32-198 4-201 (207)
338 1xau_A B- and T-lymphocyte att 99.3 3.3E-11 1.1E-15 71.9 10.4 86 122-208 24-117 (122)
339 4fa8_A Secreted protein BARF1; 99.3 6.6E-12 2.3E-16 86.3 8.4 86 122-208 3-106 (203)
340 2qsq_A Carcinoembryonic antige 99.3 2.5E-11 8.5E-16 75.0 9.9 82 122-207 10-109 (111)
341 2v9r_A Roundabout homolog 1; p 99.3 9.5E-12 3.3E-16 85.7 8.4 97 112-208 9-110 (212)
342 3grw_A Fibroblast growth facto 99.3 2E-11 6.7E-16 85.8 10.0 85 120-207 23-108 (241)
343 2wv3_A Neuroplastin; igcam, me 99.3 2.2E-11 7.5E-16 82.6 9.8 86 113-208 4-92 (190)
344 3bp6_B Programmed cell death 1 99.3 3E-11 1E-15 82.7 10.4 89 118-208 8-104 (202)
345 3knb_A Titin; IG-like, titin, 99.3 6.3E-12 2.2E-16 76.4 6.2 76 28-104 4-79 (100)
346 3bn3_B ICAM-5, intercellular a 99.3 5.6E-11 1.9E-15 80.5 11.3 158 31-194 4-174 (196)
347 3mlr_H Human monoclonal anti-H 99.3 3.2E-11 1.1E-15 84.3 10.4 155 37-197 8-217 (226)
348 3knb_B Obscurin-like protein 1 99.3 1.1E-11 3.7E-16 76.3 6.7 74 27-103 11-84 (107)
349 1pko_A Myelin oligodendrocyte 99.3 9.9E-11 3.4E-15 75.4 11.5 91 118-209 12-123 (139)
350 3khq_A B-cell antigen receptor 99.3 3.8E-11 1.3E-15 76.8 9.3 94 114-209 19-119 (133)
351 1vca_A VCAM-D1,2, human vascul 99.3 2.9E-11 9.8E-16 83.0 9.3 80 122-208 11-91 (202)
352 3d9a_L Light chain of hyhel10 99.3 3.7E-11 1.3E-15 82.9 9.7 91 117-207 6-108 (213)
353 3iu4_H CHP3 FAB heavy chain; a 99.3 1.7E-11 5.7E-16 87.7 8.1 155 37-197 8-215 (263)
354 2q20_A VK1 O18/O8 germline lig 99.3 1E-10 3.5E-15 72.1 10.6 79 114-192 5-95 (109)
355 2cqv_A MLCK, myosin light chai 99.3 6.6E-11 2.3E-15 73.6 9.7 67 27-95 5-84 (114)
356 2d3v_A Leukocyte immunoglobuli 99.3 1.4E-11 4.7E-16 84.1 7.1 90 113-207 6-96 (196)
357 2xot_A Amphoterin-induced prot 99.3 2.6E-11 8.7E-16 90.6 9.2 83 119-207 253-337 (361)
358 1f97_A Junction adhesion molec 99.3 2.7E-11 9.2E-16 83.3 8.6 90 114-208 3-104 (212)
359 2vsd_A CHIR AB1; immune system 99.2 1E-11 3.4E-16 76.2 5.6 88 113-207 6-96 (105)
360 1eaj_A Coxsackie virus and ade 99.2 8.3E-11 2.9E-15 74.1 9.9 91 116-207 9-125 (126)
361 3q0h_A T cell immunoreceptor w 99.2 6.6E-11 2.2E-15 74.0 9.2 89 119-211 10-112 (117)
362 1lk3_L 9D7 light chain; antige 99.2 5.7E-11 1.9E-15 81.9 9.5 89 119-207 7-107 (210)
363 2gi7_A GPVI protein; IG-like d 99.2 4.9E-11 1.7E-15 80.6 8.7 81 113-207 9-90 (184)
364 2c1o_A IGK-C protein; FAB frag 99.2 4.7E-11 1.6E-15 84.7 9.0 95 113-207 39-150 (254)
365 3r06_A Anti-mouse CD3epsilon a 99.2 9.9E-11 3.4E-15 80.7 10.4 93 114-206 3-107 (213)
366 1ugn_A LIR1, leukocyte immunog 99.2 1.6E-11 5.5E-16 83.9 6.1 90 113-207 6-97 (198)
367 3sgj_C Human FCG3A receptor; r 99.2 7.2E-11 2.5E-15 81.1 9.4 80 113-207 8-88 (204)
368 3nl4_L Antigen binding fragmen 99.2 1.6E-10 5.5E-15 79.7 11.1 94 114-207 3-110 (213)
369 2r15_A Myomesin-1; sarcomeric 99.2 9.5E-11 3.2E-15 80.7 9.8 90 3-95 71-181 (212)
370 4f9p_D 103.2 anti-BTN3A1 antib 99.2 5.7E-09 1.9E-13 72.0 18.0 155 38-192 9-229 (254)
371 1qfw_M FV, antibody (anti beta 99.2 1.6E-10 5.6E-15 71.1 9.5 76 118-193 7-94 (108)
372 2e27_L Anti-ciguatoxin antibod 99.2 1.5E-10 5.2E-15 72.5 9.4 93 115-207 6-110 (119)
373 1nbq_A JAM, junctional adhesio 99.2 3.5E-11 1.2E-15 82.6 7.0 91 113-207 5-106 (209)
374 4hwn_A FC receptor-like A; FCR 99.2 6.7E-11 2.3E-15 72.8 7.5 85 113-208 9-100 (108)
375 1mqk_L Antibody 7E2 FV fragmen 99.2 1.2E-10 4.1E-15 73.1 8.7 92 117-208 6-110 (120)
376 3udw_C Poliovirus receptor; PV 99.2 1.3E-10 4.5E-15 72.4 8.9 86 122-208 10-117 (118)
377 3b5h_A Cervical EMMPRIN, HAB18 99.2 1.5E-10 5.2E-15 77.9 9.8 89 3-96 61-154 (184)
378 1hng_A CD2; T lymphocyte adhes 99.2 6.8E-11 2.3E-15 79.4 7.9 83 122-208 6-100 (176)
379 1uct_A Immunoglobulin alpha FC 99.2 4.2E-11 1.4E-15 83.2 7.0 90 113-207 10-102 (218)
380 1i8k_A Epidermal growth factor 99.2 9.2E-11 3.2E-15 72.1 7.8 76 117-192 6-93 (107)
381 1fnl_A Low affinity immunoglob 99.2 1.1E-10 3.9E-15 78.1 8.5 79 113-206 8-87 (175)
382 3s96_B 3B5H10 FAB light chain; 99.2 3.2E-10 1.1E-14 78.4 11.0 92 114-207 3-116 (218)
383 1oll_A NK receptor; immune sys 99.2 1.3E-10 4.6E-15 78.7 8.6 90 113-207 5-95 (188)
384 1jbj_A CD3 epsilon and gamma e 99.2 5.6E-11 1.9E-15 80.5 6.7 63 123-198 10-73 (186)
385 3mj8_L Stimulatory hamster ant 99.2 4.4E-10 1.5E-14 77.5 11.1 93 113-206 2-108 (213)
386 3s97_C Contactin-1; carbonic a 99.2 1.4E-10 4.9E-15 79.0 8.6 80 117-198 13-94 (201)
387 3sob_L Antibody light chain; b 99.2 4.5E-10 1.5E-14 78.6 11.1 94 114-207 26-131 (237)
388 2yc1_B Single chain antibody f 99.2 3.2E-10 1.1E-14 73.4 9.5 97 114-210 18-126 (146)
389 1i3g_L Antibody FV fragment; a 99.2 2.7E-10 9.2E-15 70.4 8.8 79 114-192 6-96 (111)
390 2eo9_A Roundabout homolog 1; b 99.2 2.4E-10 8.2E-15 71.4 8.6 69 27-95 6-83 (118)
391 3bfo_A Mucosa-associated lymph 99.2 2.7E-10 9.1E-15 67.8 8.3 68 28-95 2-71 (91)
392 3u1s_H FAB PGT145 heavy chain; 99.1 1.4E-10 4.9E-15 83.0 8.4 72 125-199 181-258 (267)
393 1waa_A Titin; metal binding pr 99.1 4.3E-10 1.5E-14 67.2 8.9 74 28-105 4-77 (93)
394 1gsm_A Madcam-1, mucosal addre 99.1 2.9E-10 9.9E-15 78.0 9.1 79 122-209 17-97 (210)
395 2oyp_A Hepatitis A virus cellu 99.1 2E-10 6.8E-15 70.7 7.6 85 122-207 4-108 (109)
396 4gos_A V-SET domain-containing 99.1 8E-10 2.7E-14 69.8 10.4 88 117-205 10-118 (125)
397 3bkj_L WO2 IGG2A FAB fragment 99.1 3.4E-10 1.2E-14 80.2 9.8 94 114-207 36-146 (252)
398 1f2q_A High affinity immunoglo 99.1 1.3E-10 4.5E-15 77.8 7.2 79 113-206 5-84 (176)
399 3esu_F Antibody 14B7* light ch 99.1 6.1E-10 2.1E-14 78.7 11.0 94 114-207 6-111 (250)
400 2if7_A SLAM family member 6; N 99.1 1.9E-10 6.5E-15 78.3 8.0 87 118-208 4-107 (193)
401 4ffy_L DENV1-E111 single chain 99.1 3.8E-10 1.3E-14 71.4 8.7 94 115-208 4-113 (126)
402 2or8_A Hepatitis A virus cellu 99.1 2.5E-10 8.4E-15 71.1 7.7 90 119-209 4-111 (116)
403 2znx_A SCFV; fluorotryptohpan, 99.1 2.9E-10 9.8E-15 80.2 8.8 94 115-208 4-109 (242)
404 1hxm_A Gamma-delta T-cell rece 99.1 1.1E-09 3.7E-14 76.6 11.5 152 32-197 4-201 (229)
405 1h5b_A Murine T cell receptor 99.1 5.3E-10 1.8E-14 69.3 8.8 76 118-194 7-95 (113)
406 1b6u_A KIR2DL3, P58 killer cel 99.1 2.2E-10 7.4E-15 81.6 7.8 140 3-150 74-240 (257)
407 2aw2_A B and T lymphocyte atte 99.1 2.3E-09 7.9E-14 63.2 10.6 86 121-207 20-110 (120)
408 1moe_A Anti-CEA MAB T84.66; an 99.1 3.7E-10 1.3E-14 79.4 8.8 94 115-208 4-113 (240)
409 3rrq_A Protein PD-1, programme 99.1 1.2E-09 4.1E-14 69.4 10.3 92 117-209 6-117 (129)
410 2x1w_L Vascular endothelial gr 99.1 3.1E-10 1E-14 78.4 8.1 83 119-207 14-101 (213)
411 1xt5_A Variable region-contain 99.1 8.3E-10 2.8E-14 70.6 9.6 88 118-207 10-133 (135)
412 3qp3_A Titin; I-SET IG-like, s 99.1 4.4E-10 1.5E-14 68.4 7.7 76 26-104 5-80 (103)
413 1q0x_L FAB 9B1, light chain; a 99.1 6.6E-10 2.2E-14 76.6 9.5 88 119-206 7-109 (212)
414 3auv_A SC-DSFV derived from th 99.1 4E-10 1.4E-14 81.0 8.6 96 113-208 13-120 (276)
415 3r4d_A CEA-related cell adhesi 99.1 7.3E-10 2.5E-14 76.0 9.5 84 121-208 8-109 (208)
416 4f9l_D 20.1 anti-BTN3A1 antibo 99.1 1.8E-08 6.3E-13 69.8 16.3 158 32-190 4-230 (259)
417 3jz7_A MCAR, CAR, coxsackievir 99.1 7.7E-10 2.6E-14 76.0 9.5 91 118-209 6-122 (214)
418 2fbo_J V1V2;, variable region- 99.1 3.4E-10 1.2E-14 79.9 7.8 89 118-208 8-132 (250)
419 1g1c_A Immunoglobulin-like dom 99.1 4.3E-10 1.5E-14 67.9 7.3 74 28-103 4-77 (99)
420 1pew_A JTO2, A lambda-6 type i 99.1 1.5E-09 5.1E-14 66.8 9.8 74 119-192 7-94 (109)
421 2ens_A Advanced glycosylation 99.1 2.1E-10 7.1E-15 69.0 5.7 69 27-95 8-78 (96)
422 1eeq_A Kappa-4 immunoglobulin 99.1 5.7E-10 2E-14 69.3 7.9 90 117-206 6-113 (114)
423 1j05_L T84.66 antibody, anti-C 99.1 4.4E-10 1.5E-14 69.4 7.4 75 118-192 7-97 (111)
424 2edj_A Roundabout homolog 2; K 99.1 1.4E-09 4.9E-14 65.7 9.5 69 27-95 6-83 (100)
425 2lu7_A Obscurin-like protein 1 99.1 1.1E-09 3.7E-14 64.0 8.5 66 36-105 3-68 (84)
426 2lvc_A Obscurin-like protein 1 99.1 6.7E-10 2.3E-14 66.0 7.4 74 28-105 3-78 (91)
427 4f80_A Butyrophilin subfamily 99.1 3.6E-09 1.2E-13 73.6 12.3 85 120-205 12-117 (226)
428 1nkr_A P58-CL42 KIR; inhibitor 99.1 4.8E-10 1.6E-14 76.7 7.7 93 113-208 9-105 (201)
429 1dlf_L Anti-dansyl immunoglobu 99.1 1.8E-09 6E-14 67.0 9.5 90 117-206 6-112 (113)
430 2ywz_A NEW antigen receptor va 99.1 1.1E-09 3.8E-14 67.6 8.6 74 118-191 6-87 (111)
431 2ifg_A High affinity nerve gro 99.1 6.3E-11 2.2E-15 88.0 3.3 91 112-207 158-249 (347)
432 3tv3_L PGT128 light chain, IG 99.1 7.7E-10 2.7E-14 76.1 8.5 89 115-206 4-105 (211)
433 2yuz_A Myosin-binding protein 99.0 8.2E-10 2.8E-14 66.9 7.4 73 27-104 5-77 (100)
434 2ptt_A CD48 antigen; CD244, CD 99.0 2.5E-09 8.5E-14 65.9 9.6 84 120-207 11-108 (110)
435 1ntl_A CRRY-IG; immunology, co 99.0 7.9E-09 2.7E-13 81.4 14.8 159 35-194 348-536 (551)
436 3ry4_A Low affinity immunoglob 99.0 1.1E-09 3.6E-14 72.8 8.5 80 113-207 5-85 (170)
437 1ccz_A Protein (CD58); LFA-3, 99.0 8.9E-10 3E-14 73.5 8.0 81 122-208 5-95 (171)
438 3kg5_A B-cell antigen receptor 99.0 2.6E-09 9E-14 68.1 9.8 94 115-209 21-121 (134)
439 2q87_A CMRF35-H antigen; all-b 99.0 1E-09 3.5E-14 67.7 7.6 90 120-209 4-108 (110)
440 2yr3_A Myosin light chain kina 99.0 4E-10 1.4E-14 68.0 5.7 71 25-95 7-85 (99)
441 3sbw_C Programmed cell death 1 99.0 1.9E-09 6.7E-14 74.6 9.8 89 118-208 7-116 (222)
442 2pet_A Lutheran blood group gl 99.0 5.5E-10 1.9E-14 77.9 7.0 87 118-208 6-115 (231)
443 1svz_A Immunoglobulin;, single 99.0 1.6E-09 5.5E-14 76.5 9.5 93 116-208 5-114 (247)
444 1hnf_A CD2; T lymphocyte adhes 99.0 8.9E-10 3E-14 74.3 7.7 84 121-207 8-104 (182)
445 3puc_A Titin; I-SET IG-like do 99.0 1.3E-09 4.4E-14 65.7 7.7 75 27-104 4-78 (99)
446 4dzb_B Vbeta2 (MAIT T cell rec 99.0 2.5E-09 8.6E-14 75.4 10.3 80 115-194 4-101 (246)
447 1zox_A CLM-1; IG-superfamily, 99.0 2.7E-09 9.1E-14 66.1 9.2 91 118-211 7-112 (113)
448 2xzc_L FAB A.17 light chain; i 99.0 2.1E-09 7.1E-14 74.3 9.5 89 119-207 7-110 (216)
449 3moq_A NEW antigen receptor va 99.0 2.9E-09 1E-13 67.2 9.4 80 116-195 4-91 (126)
450 1p6f_A NKP46, natural cytotoxi 99.0 1.5E-09 5E-14 76.6 8.6 90 113-207 8-98 (242)
451 2e6q_A Obscurin-like protein 1 99.0 2.6E-09 8.9E-14 65.8 8.6 74 27-103 6-87 (112)
452 2cr6_A KIAA1556 protein, obscu 99.0 6.6E-10 2.3E-14 69.1 6.0 51 23-73 6-57 (115)
453 1ncn_A T lymphocyte activation 99.0 6.3E-09 2.1E-13 64.1 10.3 74 122-197 4-96 (110)
454 3bqu_C 3H6 FAB light chain; be 99.0 1E-10 3.6E-15 81.8 2.3 94 114-207 25-130 (233)
455 2ny1_B T-cell surface glycopro 99.0 1.4E-09 4.7E-14 73.3 7.7 73 122-194 5-92 (184)
456 2coq_A NEW antigen receptor va 99.0 1.8E-09 6.3E-14 66.3 7.5 76 117-192 5-88 (108)
457 2gjj_A A21 single-chain antibo 99.0 2E-09 6.9E-14 76.9 8.6 96 113-208 6-119 (264)
458 2kdg_A Myotilin; immonoglobuli 99.0 1.1E-09 3.7E-14 66.2 6.1 46 28-73 4-49 (100)
459 1nqb_A Single-chain antibody f 99.0 3.1E-09 1.1E-13 75.6 9.4 67 3-69 91-168 (256)
460 2kkq_A Myotilin; unknown funct 99.0 2.9E-09 9.9E-14 66.3 8.2 77 27-104 13-89 (116)
461 1oaq_L Light chain; antibody, 99.0 2.9E-09 9.8E-14 66.7 8.1 87 122-208 10-111 (120)
462 1zxq_A ICAM-2, intercellular a 99.0 2.2E-08 7.5E-13 67.3 12.8 155 31-193 4-172 (192)
463 3pv7_A B7-H6, IG-like domain-c 99.0 1.5E-09 5.3E-14 76.6 7.6 90 118-208 9-119 (248)
464 1wit_A Twitchin 18TH IGSF modu 99.0 6.8E-10 2.3E-14 66.3 4.9 46 28-73 1-48 (93)
465 1fhg_A Telokin; immunoglobulin 99.0 2.4E-09 8.3E-14 70.1 7.9 56 24-81 36-91 (154)
466 2jju_A Signal regulatory prote 99.0 1.1E-08 3.7E-13 64.8 10.7 76 117-192 8-96 (127)
467 2edo_A CD48 antigen; beta-sand 99.0 2.1E-09 7.1E-14 67.5 7.3 86 121-208 13-111 (121)
468 2d9c_A Signal-regulatory prote 99.0 1E-08 3.6E-13 65.6 10.6 94 115-208 11-122 (136)
469 3irg_A Titin; IG-like, titin, 99.0 1.4E-09 4.9E-14 65.6 6.2 75 28-103 4-78 (100)
470 2dm2_A Palladin; beta-sandwich 99.0 2.2E-09 7.4E-14 66.1 7.1 46 27-72 6-51 (110)
471 3nfj_J T cell receptor beta ch 99.0 5.7E-09 2E-13 73.5 10.2 76 117-192 6-96 (245)
472 2or7_A T-cell immunoglobulin a 99.0 2E-09 6.7E-14 66.9 6.9 92 119-211 4-114 (115)
473 3mj6_A Junctional adhesion mol 99.0 1.3E-09 4.4E-14 77.8 6.8 84 113-196 6-110 (268)
474 1neu_A Myelin P0 protein; stru 99.0 5E-09 1.7E-13 65.9 8.8 89 119-208 6-120 (124)
475 2v5y_A Receptor-type tyrosine- 99.0 2.8E-08 9.6E-13 80.9 15.2 178 3-197 136-345 (731)
476 1u2h_A APEG-1, aortic preferen 99.0 1.9E-09 6.5E-14 65.0 6.5 46 28-73 4-49 (99)
477 3ux9_B SCFV antibody; five hel 99.0 3E-09 1E-13 75.5 8.3 90 119-208 9-114 (256)
478 4fmk_A Poliovirus receptor-rel 99.0 3.5E-09 1.2E-13 73.1 8.5 86 121-206 10-119 (225)
479 1x9q_A SCFV, 4M5.3 anti-fluore 99.0 1.6E-09 5.5E-14 77.5 7.0 95 113-207 16-127 (268)
480 2e7b_A Obscurin; IG-like domai 98.9 3E-09 1E-13 64.6 7.2 53 27-82 6-58 (103)
481 3omz_A Human vdelta1 gamma del 98.9 4.4E-09 1.5E-13 74.8 9.1 95 113-208 3-119 (259)
482 3tf7_C 42F3 MUT7 SCFV (42F3 al 98.9 9.4E-09 3.2E-13 73.0 10.8 94 114-207 5-116 (256)
483 3r0n_A Poliovirus receptor-rel 98.9 5E-09 1.7E-13 66.3 8.4 85 119-204 9-127 (128)
484 1sq2_N Novel antigen receptor; 98.9 3E-09 1E-13 65.9 7.1 75 118-192 6-88 (113)
485 1nct_A Titin; cell adhesion, g 98.9 1.2E-09 3.9E-14 67.0 5.2 76 27-105 12-87 (106)
486 3u6r_L Antibody 1:7 (light cha 98.9 1.1E-08 3.9E-13 65.9 10.1 90 117-207 5-106 (143)
487 2v9t_A Roundabout homolog 1; s 98.9 1.8E-09 6.3E-14 67.2 6.2 48 26-73 6-53 (117)
488 3bj9_1 Immunoglobulin IOTA cha 98.9 1.2E-08 4E-13 63.5 9.8 87 121-207 7-114 (116)
489 2ghw_B Anti-SARS SCFV antibody 98.9 5.6E-09 1.9E-13 73.6 9.3 102 3-105 93-222 (247)
490 3irg_B Obscurin-like protein 1 98.9 2.7E-09 9.3E-14 65.3 6.7 53 27-81 11-63 (107)
491 4gjt_B Poliovirus receptor-rel 98.9 5.3E-09 1.8E-13 65.8 8.0 88 119-207 7-117 (123)
492 2edh_A Obscurin; structural ge 98.9 1.2E-08 4.2E-13 63.0 9.5 78 22-104 11-89 (113)
493 2dlt_A Myosin binding protein 98.9 3.5E-09 1.2E-13 64.8 6.8 52 27-81 6-57 (106)
494 2eny_A Obscurin; beta-sandwich 98.9 2.1E-09 7.2E-14 65.6 5.8 54 27-82 6-60 (104)
495 2p1y_A Bispecific alpha/beta T 98.9 1.5E-08 5.1E-13 71.0 11.0 77 117-194 5-97 (238)
496 2edf_A Obscurin; beta-sandwich 98.9 4.2E-09 1.4E-13 64.0 7.0 52 27-81 6-57 (103)
497 3q5y_A TCR N15 beta; IG, T cel 98.9 2.1E-08 7.3E-13 70.3 11.7 92 114-206 4-113 (240)
498 3juy_B 3B3 single chain varian 98.9 8.7E-09 3E-13 73.1 9.7 80 113-192 7-107 (256)
499 1p4b_L Antibody variable light 98.9 8.3E-09 2.8E-13 65.9 8.6 88 121-208 14-116 (135)
500 3r08_E T-cell surface glycopro 98.9 4.5E-09 1.5E-13 60.6 6.5 58 36-95 6-66 (82)
No 1
>3b43_A Titin; I-SET IG fold, extended poly-IG filament, elastic FIL structural protein; 3.30A {Oryctolagus cuniculus}
Probab=99.96 E-value=1.9e-28 Score=193.50 Aligned_cols=196 Identities=19% Similarity=0.266 Sum_probs=152.4
Q ss_pred ceeeEEEeeccCCCcceecccccCCCCCeEEeCCCccEEeeCCeEEEEcccCCCCCCcEEEEeCCEEecCCCCCeeEEe-
Q psy2441 3 IGTYIKIKPNLFSPLSVYSADKIPPGFPQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREMLPVDTSRNPRYNLL- 81 (212)
Q Consensus 3 ~g~Y~C~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~k~g~~l~~~~~~~~~~~- 81 (212)
+|.|+|.|.|..|..... ..+.+..+|.+...+....+.+|+++.|.|.+.|.|.+.+.|+|+|.++... .++.+.
T Consensus 359 ~G~Y~C~a~N~~g~~~~~-~~l~V~~~P~~~~~~~~~~~~~G~~v~l~C~~~g~P~p~v~W~k~g~~l~~~--~~~~~~~ 435 (570)
T 3b43_A 359 SGDYTCEAHNAAGSASSS-TSLKVKEPPVFRKKPHPVETLKGADVHLECELQGTPPFQVSWHKDKRELRSG--KKYKIMS 435 (570)
T ss_dssp CEEEEEEEEBTTBCCEEE-EEECEECCCEECSCCCCEEECTTCCEEEEEEEESSSSCCCEEEETTEECCSS--SSEEEEE
T ss_pred CEEEEEEEEeCCCEEEEE-EEEEecCCCeeecCCCceeecCCCEEEEEEEEecCCCCEEEEEECCEECcCC--CCEEEEE
Confidence 599999999999876544 4566678899988888888999999999999999999999999999998765 333322
Q ss_pred ----------ec--CCCCeEEEeeeCCcccee--EEeecCCCCCCCccccCCcceeEecCCcEEEEEeeeeCCCCceEEE
Q psy2441 82 ----------TS--GAPGTYIKIKPNLFSPLS--VYSADKIPPGFPQITEAPSTKVVEISHTTVLHCSASGNPPPKISWI 147 (212)
Q Consensus 82 ----------~~--~~~g~~l~i~~~~~~~~~--v~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~ 147 (212)
.. +|.|.|.|.+.+...... ...... .+|.+...+....+.+|+.+.|.|.+.+.|.+.+.|+
T Consensus 436 ~~~~~~L~i~~v~~~D~G~Y~C~A~N~~G~~~~~~~l~v~---~~P~~~~~~~~~~~~~g~~~~l~c~~~g~p~~~v~W~ 512 (570)
T 3b43_A 436 ENFLTSIHILNVDSADIGEYQCKASNDVGSDTCVGSITLK---APPRFVKKLSDISTVVGEEVQLQATIEGAEPISVAWF 512 (570)
T ss_dssp ETTEEEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEEC---CCCEEEECCCCBCCBTTCCEEEEEEEESCSSCCCEEE
T ss_pred cCCEEEEEECCCChhhCEEEEEEEEECCCeEEEEEEEEec---cCCcccccCCCceecCCCeEEEEEEEecCCCCEEEEE
Confidence 11 378899998877332211 111111 2377777777777889999999999999999999999
Q ss_pred eCCEEecCCCCCceEEcCCCCceeEEEcCCCCCCCeeEEEEEEcccccceecceEEEEe
Q psy2441 148 REMLPVDTSRNPRYNLLTSGAPGALQITNSIEEDQGKYECVAENEVGTEYSPSTMLYVK 206 (212)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~n~~g~~~~~~~~l~v~ 206 (212)
+++..+... ..++.+...+....|.|.++..+|+|.|.|.|.|..|.+... +.|.|.
T Consensus 513 k~~~~~~~~-~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~-a~L~V~ 569 (570)
T 3b43_A 513 KDKGEIVRE-SDNIWISYSENIATLQFSRAEPANAGKYTCQIKNEAGTQECF-ATLSVL 569 (570)
T ss_dssp ETTEECCCC-TTTEEECCCSSEEEEEESSCCTTCCEEEEEEEECSSCEEEEE-EEECCB
T ss_pred eCCeEeccC-CCeEEEEECCCEEEEEECcCCHHHCEEEEEEEEECCcEEEEE-EEEEEe
Confidence 998665433 244555444445799999999999999999999999999887 777664
No 2
>2rik_A Titin; I-SET IG fold, poly-IG linear array, structural protein; 1.60A {Oryctolagus cuniculus} PDB: 2rjm_A
Probab=99.96 E-value=1.1e-27 Score=173.43 Aligned_cols=194 Identities=22% Similarity=0.368 Sum_probs=147.2
Q ss_pred ceeeEEEeeccCCCcceecccccCCCCCeEEeCCC-ccEEeeCCeEEEEcccCCCCCCcEEEEeCCEEecCCCCCe----
Q psy2441 3 IGTYIKIKPNLFSPLSVYSADKIPPGFPQITEAPS-TKVVEISHTTVLHCSASGNPPPKISWIREMLPVDTSRNPR---- 77 (212)
Q Consensus 3 ~g~Y~C~~~~~~~~~~~~~~~~~~~~~p~~~~~~~-~~~v~~g~~v~l~C~~~~~p~~~v~W~k~g~~l~~~~~~~---- 77 (212)
+|.|+|.+.|..+... ....+.+..+|.+...+. ...+.+|+.+.|.|.+.+.|.+.+.|+|++..+......+
T Consensus 73 ~G~Y~C~~~n~~g~~~-~~~~l~V~~~p~~~~~~~~~~~v~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~ 151 (284)
T 2rik_A 73 AGQYTCYASNVAGKDS-CSAQLGVQEPPRFIKKLEPSRIVKQDEHTRYECKIGGSPEIKVLWYKDETEIQESSKFRMSFV 151 (284)
T ss_dssp CEEEEEEEEETTEEEE-EEEEEEEECCCEEEECCCSEEEEETTCCEEEEEEEESSSCCEEEEEETTEECCCSSSEEEEEE
T ss_pred CEEEEEEEEECCceEE-EEEEEEccCCCcccccCCCceEecCCceEEEEEEEeeeCCCEEEEEECCEECcCCCcEEEEEc
Confidence 5899999999877643 334555567888775543 4568899999999999999999999999999887652111
Q ss_pred -----eEEeec--CCCCeEEEeeeCC------ccceeEEeecCCCCCCCccccCCcceeEecCCcEEEEEeeeeCCCCce
Q psy2441 78 -----YNLLTS--GAPGTYIKIKPNL------FSPLSVYSADKIPPGFPQITEAPSTKVVEISHTTVLHCSASGNPPPKI 144 (212)
Q Consensus 78 -----~~~~~~--~~~g~~l~i~~~~------~~~~~v~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i 144 (212)
+.+... +|.|.|.|..... ...+.|.. +|.+...+....+.+|+.+.|.|.+.+.|.+.+
T Consensus 152 ~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~-------~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~v 224 (284)
T 2rik_A 152 ESVAVLEMYNLSVEDSGDYTCEAHNAAGSASSSTSLKVKE-------PPVFRKKPHPVETLKGADVHLECELQGTPPFQV 224 (284)
T ss_dssp TTEEEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEEEC-------CCBCCSCCCCEEECTTCCEEEEEECBSSSCCEE
T ss_pred CCEEEEEECCCCcccCEEEEEEEEcCCCceeEEEEEEEec-------CCcceeCCCcceecCCCeEEEEEEEEecCCCEE
Confidence 122211 3788888887662 22233322 266666666777889999999999999999999
Q ss_pred EEEeCCEEecCCCCCceEEcCCCCceeEEEcCCCCCCCeeEEEEEEcccccceecceEEEEec
Q psy2441 145 SWIREMLPVDTSRNPRYNLLTSGAPGALQITNSIEEDQGKYECVAENEVGTEYSPSTMLYVKG 207 (212)
Q Consensus 145 ~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~n~~g~~~~~~~~l~v~~ 207 (212)
.|++++..+... .++....++....|.|.++..+|.|.|.|.|.|..|..... +.|.|++
T Consensus 225 ~W~~~~~~~~~~--~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~-~~l~V~~ 284 (284)
T 2rik_A 225 SWHKDKRELRSG--KKYKIMSENFLTSIHILNVDSADIGEYQCKASNDVGSYTCV-GSITLKA 284 (284)
T ss_dssp EEEETTEEECBT--TTEEEEEETTEEEEEECSCCGGGCEEEEEEEEETTEEEEEE-EEEEECC
T ss_pred EEEECCEECcCC--CCEEEEEcCCEEEEEEcCCCcccCEEEEEEEEeCCCceeEE-EEEEEcC
Confidence 999999998765 45555444445789999999999999999999999998877 8887763
No 3
>1qz1_A Neural cell adhesion molecule 1, 140 kDa isoform; IG modules, NCAM; 2.00A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ie5_A
Probab=99.96 E-value=5.9e-28 Score=175.46 Aligned_cols=195 Identities=20% Similarity=0.300 Sum_probs=145.6
Q ss_pred ceeeEEEeeccCCCcceecccccCCCCCeEEeCCCccEEeeCCeEEEEcccCCCCCCcEEEEeCCEEecCCCCC------
Q psy2441 3 IGTYIKIKPNLFSPLSVYSADKIPPGFPQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREMLPVDTSRNP------ 76 (212)
Q Consensus 3 ~g~Y~C~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~k~g~~l~~~~~~------ 76 (212)
+|.|+|.+.|..+........+.+..+|.+...+....+.+|+.+.|.|.+.+.|.+.+.|+|++..+......
T Consensus 74 ~G~Y~C~~~n~~g~~~~~~~~l~v~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~ 153 (291)
T 1qz1_A 74 AGIYKCVVTAEDGTQSEATVNVKIFQKLMFKNAPTPQEFKEGEDAVIVCDVVSSLPPTIIWKHKGRDVILKKDVRFIVLS 153 (291)
T ss_dssp CEEEEEEEECTTSCEEEEEEEEEEECCSEEEECCSSEEEETTSCEEECCEEECSSCCEEEEEETTSCSSTTCCTTEEECT
T ss_pred CEEEEEEEEcCCCCeeEEEEEEEeeccccccCCCCcccccCCCeEEEEEEeccCCCCEEEEEECCEEcccCCCceEEEcc
Confidence 69999999998875444444555577888888888899999999999999999999999999999877543222
Q ss_pred --eeEEeec--CCCCeEEEeeeCCc--------cceeEEeecCCCCCCCccccCC--cceeEecCCcEEEEEeeeeCCCC
Q psy2441 77 --RYNLLTS--GAPGTYIKIKPNLF--------SPLSVYSADKIPPGFPQITEAP--STKVVEISHTTVLHCSASGNPPP 142 (212)
Q Consensus 77 --~~~~~~~--~~~g~~l~i~~~~~--------~~~~v~~~~~~~~~~p~~~~~~--~~~~~~~g~~~~l~C~~~~~p~~ 142 (212)
.+.+... +|.|.|.|...... ..+.+.. +|.+.... ....+.+|+.+.|.|.+.+.|.|
T Consensus 154 ~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~~~l~v~~-------~p~~~~~~~~~~~~~~~g~~v~l~C~~~g~p~p 226 (291)
T 1qz1_A 154 NNYLQIRGIKKTDEGTYRCEGRILARGEINFKDIQVIVNV-------PPTVQARQSIVNATANLGQSVTLVCDADGFPEP 226 (291)
T ss_dssp TSCEEETTCCGGGCEEEEEEEEEGGGTEEEEEEEEEEEEE-------EEEEEESCSEEEEETTSCCCEEEEEEEEEESCC
T ss_pred CCcEEEccCccccCeEEEEEEEecCCCceeeEEEEEEEec-------CCcccccccccccccccCceEEEEEEEEEeCCC
Confidence 2333222 37889999876411 1222222 14444332 23467789999999999999999
Q ss_pred ceEEEeCCEEecCCC--CCceEEcCCCCceeEEEcCCCCCCCeeEEEEEEcccccceecceEEEEec
Q psy2441 143 KISWIREMLPVDTSR--NPRYNLLTSGAPGALQITNSIEEDQGKYECVAENEVGTEYSPSTMLYVKG 207 (212)
Q Consensus 143 ~i~W~~~~~~~~~~~--~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~n~~g~~~~~~~~l~v~~ 207 (212)
.+.|++++..+.... ..++....++ ..|.|.++..+|.|.|.|.|.|..|..... +.|.|.+
T Consensus 227 ~i~W~~~g~~~~~~~~~~~~~~~~~~~--~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~-~~l~V~~ 290 (291)
T 1qz1_A 227 TMSWTKDGEPIENEEEDDEKHIFSDDS--SELTIRNVDKNDEAEYVCIAENKAGEQDAS-IHLKVFA 290 (291)
T ss_dssp EEEEEETTEECCCC--CCSSEEECTTS--CEEEECSCCGGGCEEEEEEEEETTEEEEEE-EEEEEEC
T ss_pred cEEEEECCEECcCCCCCCcceEEcCCC--cEEEEEecChhcCEEEEEEEEeCCCceEEE-EEEEEEc
Confidence 999999999887652 1344444443 789999999999999999999999998777 8888765
No 4
>3b43_A Titin; I-SET IG fold, extended poly-IG filament, elastic FIL structural protein; 3.30A {Oryctolagus cuniculus}
Probab=99.96 E-value=1.4e-27 Score=188.62 Aligned_cols=194 Identities=21% Similarity=0.386 Sum_probs=151.1
Q ss_pred ceeeEEEeeccCCCcceecccccCCCCCeEEeCCC-ccEEeeCCeEEEEcccCCCCCCcEEEEeCCEEecCCCCCeeE--
Q psy2441 3 IGTYIKIKPNLFSPLSVYSADKIPPGFPQITEAPS-TKVVEISHTTVLHCSASGNPPPKISWIREMLPVDTSRNPRYN-- 79 (212)
Q Consensus 3 ~g~Y~C~~~~~~~~~~~~~~~~~~~~~p~~~~~~~-~~~v~~g~~v~l~C~~~~~p~~~v~W~k~g~~l~~~~~~~~~-- 79 (212)
+|.|+|.+.|..|... ....+.+..+|.+...+. ...+.+|+.+.|.|.+.|.|.+.+.|+|+|.++... .++.
T Consensus 265 ~G~Y~C~a~N~~g~~~-~~~~l~V~~~p~~~~~~~~~~~v~~g~~~~l~C~~~g~P~p~v~W~k~~~~l~~~--~~~~~~ 341 (570)
T 3b43_A 265 AGQYTCYASNVAGKDS-CSAQLGVQEPPRFIKKLEPSRIVKQDEHTRYECKIGGSPEIKVLWYKDETEIQES--SKFRMS 341 (570)
T ss_dssp CEEEEEEEEETTEEEE-EEEEECCBCCCEEEECCCSBCCEESSCEEEEEEEEESSSSCEEEEEETTEECCCS--SSEEEE
T ss_pred CEEEEEEEECCCCcEE-EEEEEEeecCCcccccCCCccEEcCCCcEEEEEEEeeCCCCEEEEeECCEECCCC--CcEEEE
Confidence 5899999999888754 345566778888876543 456889999999999999999999999999998765 3322
Q ss_pred ---------Eeec--CCCCeEEEeeeCCc------cceeEEeecCCCCCCCccccCCcceeEecCCcEEEEEeeeeCCCC
Q psy2441 80 ---------LLTS--GAPGTYIKIKPNLF------SPLSVYSADKIPPGFPQITEAPSTKVVEISHTTVLHCSASGNPPP 142 (212)
Q Consensus 80 ---------~~~~--~~~g~~l~i~~~~~------~~~~v~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~ 142 (212)
+... +|.|.|.|.+.+.. ..+.|. .+|.+...+....+.+|+.+.|.|.+.|.|.|
T Consensus 342 ~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V~-------~~P~~~~~~~~~~~~~G~~v~l~C~~~g~P~p 414 (570)
T 3b43_A 342 FVESVAVLEMYNLSVEDSGDYTCEAHNAAGSASSSTSLKVK-------EPPVFRKKPHPVETLKGADVHLECELQGTPPF 414 (570)
T ss_dssp EETTEEEEEEESCCGGGCEEEEEEEEBTTBCCEEEEEECEE-------CCCEECSCCCCEEECTTCCEEEEEEEESSSSC
T ss_pred EECCEEEEEECCCCcccCEEEEEEEEeCCCEEEEEEEEEec-------CCCeeecCCCceeecCCCEEEEEEEEecCCCC
Confidence 2221 37889999887622 223332 23677777777778899999999999999999
Q ss_pred ceEEEeCCEEecCCCCCceEEcCCCCceeEEEcCCCCCCCeeEEEEEEcccccceecceEEEEecce
Q psy2441 143 KISWIREMLPVDTSRNPRYNLLTSGAPGALQITNSIEEDQGKYECVAENEVGTEYSPSTMLYVKGTQ 209 (212)
Q Consensus 143 ~i~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~n~~g~~~~~~~~l~v~~~~ 209 (212)
.+.|++++..+... .++....++....|.|.++..+|.|.|.|.|.|..|..... +.|.|+.++
T Consensus 415 ~v~W~k~g~~l~~~--~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~A~N~~G~~~~~-~~l~v~~~P 478 (570)
T 3b43_A 415 QVSWHKDKRELRSG--KKYKIMSENFLTSIHILNVDSADIGEYQCKASNDVGSDTCV-GSITLKAPP 478 (570)
T ss_dssp CCEEEETTEECCSS--SSEEEEEETTEEEEEECSCCGGGCEEEEEEEECSSCEEEEE-EEEEECCCC
T ss_pred EEEEEECCEECcCC--CCEEEEEcCCEEEEEECCCChhhCEEEEEEEEECCCeEEEE-EEEEeccCC
Confidence 99999999988764 45555544444689999999999999999999999998776 777776643
No 5
>2wim_A N-CAM 2, NCAM2, neural cell adhesion molecule 2; cell membrane, transmembrane, immunoglobulin; HET: NDG NAG; 3.00A {Homo sapiens}
Probab=99.96 E-value=7.8e-28 Score=174.84 Aligned_cols=200 Identities=22% Similarity=0.306 Sum_probs=141.0
Q ss_pred ceeeEEEeeccCCCcceecccccCCCCCeEEeCCCccEEeeCCeEEEEcccCCCCCCcEEEEeCCEEecCCCCCee----
Q psy2441 3 IGTYIKIKPNLFSPLSVYSADKIPPGFPQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREMLPVDTSRNPRY---- 78 (212)
Q Consensus 3 ~g~Y~C~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~k~g~~l~~~~~~~~---- 78 (212)
+|.|+|.+.|..+........+.+..+|.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+......++
T Consensus 72 ~G~Y~C~~~n~~g~~~~~~~~l~v~~~~~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~ 151 (291)
T 2wim_A 72 AGIYRCQATDAKGQTQEATVVLEIYQKLTFREVVSPQEFKQGEDAEVVCRVSSSPAPAVSWLYHNEEVTTISDNRFAMLA 151 (291)
T ss_dssp CEEEEEEEECSSSCEEEEEEEEEEECCCBCCSCCCSEEEETTSCEEECCCCBCSSCCEEEEECC----CBCCCSSEEECT
T ss_pred CEEEEEEEecccCceEEEEEEEEecCCcceEeCCCChhhcCCCCEEEEEEEccCCCCEEEEEECCccccccCCceEEEcc
Confidence 5999999999887654444445556777777777888899999999999999999999999999987764322333
Q ss_pred ----EEeec--CCCCeEEEeeeCCc-cc---eeEEeecCCCCCCCccccCCc--ceeEecCCcEEEEEeeeeCCCCceEE
Q psy2441 79 ----NLLTS--GAPGTYIKIKPNLF-SP---LSVYSADKIPPGFPQITEAPS--TKVVEISHTTVLHCSASGNPPPKISW 146 (212)
Q Consensus 79 ----~~~~~--~~~g~~l~i~~~~~-~~---~~v~~~~~~~~~~p~~~~~~~--~~~~~~g~~~~l~C~~~~~p~~~i~W 146 (212)
.+... +|.|.|.|...... .. ..+...... +|.+..... ...+.+|+.+.|.|.+.+.|.|.+.|
T Consensus 152 ~~~L~i~~v~~~d~G~Y~C~~~n~~~~~~~~~~~~~~v~~---~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~v~W 228 (291)
T 2wim_A 152 NNNLQILNINKSDEGIYRCEGRVEARGEIDFRDIIVIVNV---PPAISMPQKSFNATAERGEEMTFSCRASGSPEPAISW 228 (291)
T ss_dssp TSCEEETTCCGGGCEEEEEEEEETTTTEEEEEEEEEEEEB---CCCCBCSCSEEECCSSSCCEEEEECBCCCBSCCEEEE
T ss_pred CCCEEEEecchhhCEEEEEEEEECCCCeeEEeeEEEEecc---CCccccCcccccceecCCCeEEEEEEeecCCCCeEEE
Confidence 33222 37889999876522 11 111111111 244443333 34567899999999999999999999
Q ss_pred EeCCEEecCCCCCceEEcCCCCceeEEEcCCCCCCCeeEEEEEEcccccceecceEEEEeccee
Q psy2441 147 IREMLPVDTSRNPRYNLLTSGAPGALQITNSIEEDQGKYECVAENEVGTEYSPSTMLYVKGTQV 210 (212)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~n~~g~~~~~~~~l~v~~~~~ 210 (212)
++++..+... .++...... ..|.|.++..+|+|.|.|.|.|..|..... +.|.|.+++.
T Consensus 229 ~~~g~~~~~~--~~~~~~~~~--~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~-~~l~v~~~~~ 287 (291)
T 2wim_A 229 FRNGKLIEEN--EKYILKGSN--TELTVRNIINSDGGPYVCRATNKAGEDEKQ-AFLQVFVQHH 287 (291)
T ss_dssp EETTEECCCT--TTEEECSTT--CEEEEESCCSTTCEEEEEEEEETTEEEEEE-EEEEC-----
T ss_pred EECCEECcCC--ccEEEcCCc--cEEEEeeCCcccCEEEEEEEEECCCceeee-EEEEEEEecc
Confidence 9999988764 445444333 789999999999999999999999999888 8888776643
No 6
>2yd6_A PTPRD protein; hydrolase; HET: FLC; 1.35A {Homo sapiens} PDB: 2yd7_A 2yd2_A 2yd3_A 2yd4_A* 2yd8_A* 2yd5_A* 3pxh_A
Probab=99.95 E-value=1.3e-26 Score=161.13 Aligned_cols=182 Identities=41% Similarity=0.680 Sum_probs=138.7
Q ss_pred CCCCeEEeCCCccEEeeCCeEEEEcccCCCCCCcEEEEeCCEEecCCC----------CCeeEEee---cCCCCeEEEee
Q psy2441 27 PGFPQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREMLPVDTSR----------NPRYNLLT---SGAPGTYIKIK 93 (212)
Q Consensus 27 ~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~k~g~~l~~~~----------~~~~~~~~---~~~~g~~l~i~ 93 (212)
..+|.|...|.+..+.+|+.+.|.|.+.+.|.+.+.|+|+|..+.... ...+.+.. .+|.|.|.|..
T Consensus 4 ~~~P~~~~~p~~~~v~~G~~v~L~C~~~g~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~~d~G~Y~C~a 83 (212)
T 2yd6_A 4 ETPPRFTRTPVDQTGVSGGVASFICQATGDPRPKIVWNKKGKKVSNQRFEVIEFDDGSGSVLRIQPLRTPRDEAIYECVA 83 (212)
T ss_dssp CEEEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCTTEEEEEEGGGTEEEEEECSCCTTTTCEEEEEEE
T ss_pred CCCCeEEeCcceeEEecCCeEEEEEEEeeCCCCEEEEEECCcCCCCCceeEEEEcCCCceEEEEeccCCCCCCeEEEEEE
Confidence 467899999999999999999999999999999999999998886531 11233332 24888999987
Q ss_pred eCC------ccceeEEeecCCCCCCCccccCCcceeEecCCcEEEEEeeeeCCCCceEEEeCCEEecCC-CCCceEEcCC
Q psy2441 94 PNL------FSPLSVYSADKIPPGFPQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREMLPVDTS-RNPRYNLLTS 166 (212)
Q Consensus 94 ~~~------~~~~~v~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~-~~~~~~~~~~ 166 (212)
... ...+.|......++..|.+...+....+..|+.+.|.|.+.+.|.|.+.|++++..+... ...++....+
T Consensus 84 ~n~~g~~~~~~~l~V~~~~~~~~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~v~W~~~g~~l~~~~~~~~~~~~~~ 163 (212)
T 2yd6_A 84 SNNVGEISVSTRLTVLREDQIPRGFPTIDMGPQLKVVERTRTATMLCAASGNPDPEITWFKDFLPVDTSNNNGRIKQLRS 163 (212)
T ss_dssp EETTEEEEEEEEEEEECGGGCCTTCCEEEECCCCEEEETTSCEEEEEEEECSSCCEEEEEETTEEC------CCEEEEEE
T ss_pred EcCCCcEEEEEEEEEeccCccCCCcceeecCCcceeEecCCCEEEEEEecCCCCCeEEEEECCccccCcCCCceEEEEec
Confidence 662 334445444344455577777777778889999999999999999999999999988754 2344544443
Q ss_pred CCceeEEEcCCCCCCCeeEEEEEEcccccceecceEEEEecc
Q psy2441 167 GAPGALQITNSIEEDQGKYECVAENEVGTEYSPSTMLYVKGT 208 (212)
Q Consensus 167 ~~~~~l~i~~~~~~d~g~y~C~a~n~~g~~~~~~~~l~v~~~ 208 (212)
.....|.|.++..+|.|.|+|.|.|..|...+..+.|.|...
T Consensus 164 ~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~s~~a~l~~~~~ 205 (212)
T 2yd6_A 164 ESIGALQIEQSEESDQGKYECVATNSAGTRYSAPANLYVRGT 205 (212)
T ss_dssp TTEEEEEECSCCGGGCEEEEEEEEETTEEEECCCEEEEEEC-
T ss_pred CCeEEEEEcCCCcccCEEEEEEEECCCCccccccccEEEEec
Confidence 345899999999999999999999999998877688877654
No 7
>2yd1_A Tyrosine-protein phosphatase LAR; hydrolase; 1.80A {Drosophila melanogaster} PDB: 3pxj_A
Probab=99.95 E-value=1e-25 Score=156.68 Aligned_cols=176 Identities=44% Similarity=0.776 Sum_probs=134.7
Q ss_pred CCCCeEEeCCCccEEeeCCeEEEEcccCCCCCCcEEEEeCCEEecCCCCCee------------EEee--c-CCCCeEEE
Q psy2441 27 PGFPQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREMLPVDTSRNPRY------------NLLT--S-GAPGTYIK 91 (212)
Q Consensus 27 ~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~k~g~~l~~~~~~~~------------~~~~--~-~~~g~~l~ 91 (212)
..+|.|...|.+..+.+|+.+.|.|.+.+.|.+.+.|+|+|..+... ..++ .+.. . +|.|.|.|
T Consensus 4 ~~pP~~~~~p~~~~v~~G~~v~l~C~~~g~p~~~v~W~~~~~~~~~~-~~~~~~~~~~~~~~~L~i~~v~~~~d~G~Y~C 82 (212)
T 2yd1_A 4 AHPPEIIRKPQNQGVRVGGVASFYCAARGDPPPSIVWRKNGKKVSGT-QSRYTVLEQPGGISILRIEPVRAGRDDAPYEC 82 (212)
T ss_dssp -CCCEEEECCCCEEEETTSCEEEEEEEECSSCCEEEEEETTEECCTT-STTEEEEEETTTEEEEEESSCCTTTTCSEEEE
T ss_pred CCCCEEEcCCCceEEecCCEEEEEEEEccCCCCeEEEEECCEECCCC-cceeEEEEcCCCeEEEEEEecCCCCcCceEEE
Confidence 36899999999999999999999999999999999999999988632 1222 2222 1 47888999
Q ss_pred eeeCCc-------cceeEEeecCCCCCCCccccCCcceeEecCCcEEEEEeeeeCCCCceEEEeCCEEecCCCCCceEEc
Q psy2441 92 IKPNLF-------SPLSVYSADKIPPGFPQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREMLPVDTSRNPRYNLL 164 (212)
Q Consensus 92 i~~~~~-------~~~~v~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~ 164 (212)
...... ..+.|......++.+|.+...+....+..|+.+.|.|.+.+.|.+.+.|++++..+... ..++..
T Consensus 83 ~~~n~~g~~~~~~~~l~V~~~~~~~~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~-~~~~~~- 160 (212)
T 2yd1_A 83 VAENGVGDAVSADATLTIYEGDKTPAGFPVITQGPGTRVIEVGHTVLMTCKAIGNPTPNIYWIKNQTKVDMS-NPRYSL- 160 (212)
T ss_dssp EEECSSSCEEEEEEEEEEECTTCSCTTCCEEEECCCCEEEETTCCEEECCEEECSSCCEEEEEETTEECCTT-STTEEE-
T ss_pred EEEeCCCCeEEeeEEEEEecccCCCCCCCeeEeCCCceEeecCCeEEEEEEeccCCCCeEEEEECCeEcccC-CCeEEc-
Confidence 876622 23334333223334466776777778889999999999999999999999999988764 234433
Q ss_pred CCCCceeEEEcCCCCCCCeeEEEEEEcccccceecceEEEEecc
Q psy2441 165 TSGAPGALQITNSIEEDQGKYECVAENEVGTEYSPSTMLYVKGT 208 (212)
Q Consensus 165 ~~~~~~~l~i~~~~~~d~g~y~C~a~n~~g~~~~~~~~l~v~~~ 208 (212)
.+ +.|.|.++..+|.|.|.|.|.|..|......+.|.|+..
T Consensus 161 ~~---~~L~i~~v~~~d~G~Y~C~a~N~~G~~~s~~~~l~V~~~ 201 (212)
T 2yd1_A 161 KD---GFLQIENSREEDQGKYECVAENSMGTEHSKATNLYVKVR 201 (212)
T ss_dssp ET---TEEEECSCCGGGCEEEEEEEEETTEEEECCCEEEEEEC-
T ss_pred cC---CeEEEccCChhhCEEEEEEeecCCCceeEEEEEEEEEec
Confidence 23 589999999999999999999999998765478888765
No 8
>3laf_A Deleted in colorectal cancer; netrin-1 receptor, immunoglobulin superfamily, horseshoe, AP; HET: NAG BMA; 2.40A {Rattus norvegicus}
Probab=99.95 E-value=1.9e-26 Score=174.72 Aligned_cols=193 Identities=26% Similarity=0.403 Sum_probs=145.9
Q ss_pred ceeeEEEeeccCCCcceecccccCCCCC------eEEeCCCccEEeeCCeEEEEcccCCCCCCcEEEEeCCEEecCCC--
Q psy2441 3 IGTYIKIKPNLFSPLSVYSADKIPPGFP------QITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREMLPVDTSR-- 74 (212)
Q Consensus 3 ~g~Y~C~~~~~~~~~~~~~~~~~~~~~p------~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~k~g~~l~~~~-- 74 (212)
+|.|+|.+.|..+........+.+..+| .+...+....+.+|+.+.|.|.+.+.|.+.+.|+|++..+....
T Consensus 189 ~G~Y~C~~~n~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~~~~~ 268 (403)
T 3laf_A 189 SGVYRCSARNPASTRTGNEAEVRILSDPGLHRQLYFLQRPSNVIAIEGKDAVLECCVSGYPPPSFTWLRGEEVIQLRSKK 268 (403)
T ss_dssp CEEEEEEEECSSCCCBCCCEEEEEECCCCCCEEEEEEECCCCEEEETTSCEEECCEEEEESCCEEEEEETTEECCCSSSS
T ss_pred CEEEEEEEEcCCCceeccceeEEEecCCCcccCceEecCCCceEecCCCcEEEEEEcCCCCCCeEEEEECCeeccCCCce
Confidence 5899999999876543333333332222 34566778889999999999999999999999999998876532
Q ss_pred -----CCeeEEeec--CCCCeEEEeeeC------CccceeEEeecCCCCCCCccccCCcceeEecCCcEEEEEeeeeCCC
Q psy2441 75 -----NPRYNLLTS--GAPGTYIKIKPN------LFSPLSVYSADKIPPGFPQITEAPSTKVVEISHTTVLHCSASGNPP 141 (212)
Q Consensus 75 -----~~~~~~~~~--~~~g~~l~i~~~------~~~~~~v~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~ 141 (212)
...+.+... +|.|.|.|...+ ....+.|... |.+...+....+.+|+.+.|.|.+.+.|.
T Consensus 269 ~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~-------p~~~~~~~~~~~~~g~~v~l~C~~~g~p~ 341 (403)
T 3laf_A 269 YSLLGGSNLLISNVTDDDSGTYTCVVTYKNENISASAELTVLVP-------PWFLNHPSNLYAYESMDIEFECAVSGKPV 341 (403)
T ss_dssp EEEETTTEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEEE-------EEEEECCCCEECCTTCCEEECCEEEEESC
T ss_pred EEECCccEEEEeCCCHHHCEEEEEEEEcCCCceEEEEEEEEECC-------CcEeecCcceEEecCCeEEEEEEEeeccC
Confidence 122333332 488899998765 2334444432 66666677777889999999999999999
Q ss_pred CceEEEeCCEEecCCCCCceEEcCCCCceeEEEcCCCCCCCeeEEEEEEcccccceecceEEEEecc
Q psy2441 142 PKISWIREMLPVDTSRNPRYNLLTSGAPGALQITNSIEEDQGKYECVAENEVGTEYSPSTMLYVKGT 208 (212)
Q Consensus 142 ~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~n~~g~~~~~~~~l~v~~~ 208 (212)
|.+.|++++..+... .++....+ ..|.|.++..+|.|.|.|.|.|..|..... +.|.|+++
T Consensus 342 p~v~W~~~g~~~~~~--~~~~~~~~---~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~-~~l~V~~P 402 (403)
T 3laf_A 342 PTVNWMKNGDVVIPS--DYFQIVGG---SNLRILGVVKSDEGFYQCVAENEAGNAQSS-AQLIVPKP 402 (403)
T ss_dssp CEEEEEETTEECCCS--SSEEEETT---TEEEESSCCGGGCEEEEEEEEETTEEEEEE-EEEECCCC
T ss_pred CEEEEEECCEECCCC--CcEEEecC---ccEEEeccccccCEEEEEEEEcCCceEEEE-EEEEEeCC
Confidence 999999999988664 44544444 789999999999999999999999999877 88877764
No 9
>3kld_A Contactin 4, axcam, BIG-2; cell adhesion, protein complex, receptor protein tyrosine phosphatase; HET: NAG; 2.00A {Mus musculus} PDB: 3jxa_A*
Probab=99.95 E-value=3.6e-26 Score=172.47 Aligned_cols=191 Identities=28% Similarity=0.444 Sum_probs=140.8
Q ss_pred ceeeEEEeeccCCCcceecc--c-------ccCCCCCeEE-eCCCccEEeeCCeEEEEcccCCCCCCcEEEEeC-CEEec
Q psy2441 3 IGTYIKIKPNLFSPLSVYSA--D-------KIPPGFPQIT-EAPSTKVVEISHTTVLHCSASGNPPPKISWIRE-MLPVD 71 (212)
Q Consensus 3 ~g~Y~C~~~~~~~~~~~~~~--~-------~~~~~~p~~~-~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~k~-g~~l~ 71 (212)
+|.|+|.+.|..+....... . .....+|.+. ..+....+.+|+.+.|.|.+.|.|.|.+.|+|+ +.++.
T Consensus 169 ~G~Y~C~a~n~~~~~~~~~~~~~~~v~~~~~~~~~~p~~~~~~~~~~~~~~G~~v~l~C~~~g~P~p~i~W~k~~~~~~~ 248 (384)
T 3kld_A 169 VGNYTCVVTNTVTNHKVLGPPTPLILRNDGVMGEYEPKIEVQFPETVPAEKGTTVKLECFALGNPVPTILWRRADGKPIA 248 (384)
T ss_dssp CEEEEEEEEETTTTEEEECCCEEEEEEEEEECCCEEEEEEEECCSEEEEETTSCEEEEEEEEEESCCEEEEEETTCCCCC
T ss_pred CceEEEEEecccccceeeCCceEEEEccCCcccccCCceeecCCCceEecCCCcEEEEEEEeecCCCcEEEEeCCCcccc
Confidence 59999999998765332111 0 1112344444 446677889999999999999999999999995 44443
Q ss_pred CC-----CCCeeEEeec--CCCCeEEEeeeCC------ccceeEEeecCCCCCCCccccCCcceeEecCCcEEEEEeeee
Q psy2441 72 TS-----RNPRYNLLTS--GAPGTYIKIKPNL------FSPLSVYSADKIPPGFPQITEAPSTKVVEISHTTVLHCSASG 138 (212)
Q Consensus 72 ~~-----~~~~~~~~~~--~~~g~~l~i~~~~------~~~~~v~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~ 138 (212)
.. ....+.+... +|.|.|.|.+.+. ...+.|... |.+...+....+..|+.+.|.|.+.|
T Consensus 249 ~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~v~~~-------P~~~~~~~~~~v~~g~~v~l~C~~~g 321 (384)
T 3kld_A 249 RKARRHKSNGILEIPNFQQEDAGSYECVAENSRGKNVAKGQLTFYAQ-------PNWVQIINDIHVAMEESVFWECKANG 321 (384)
T ss_dssp TTCEECTTSCEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEEE-------EEEEECCCCEEECTTCCEEEECEEEE
T ss_pred ccceecCCCcEEEECCCChhhCEEEEEEEEcCCCeEEEEEEEEEecC-------CccccCCCceEecCCCCEEEEeECCc
Confidence 22 1223444433 4899999988762 234444432 66666667778889999999999999
Q ss_pred CCCCceEEEeCCEEecCCCCCceEEcCCCCceeEEEcCCCCCCCeeEEEEEEcccccceecceEEEEec
Q psy2441 139 NPPPKISWIREMLPVDTSRNPRYNLLTSGAPGALQITNSIEEDQGKYECVAENEVGTEYSPSTMLYVKG 207 (212)
Q Consensus 139 ~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~n~~g~~~~~~~~l~v~~ 207 (212)
.|.|.|.|++++..+... .++... + +.|.|.++..+|+|.|.|.|.|..|..... +.|.|.+
T Consensus 322 ~P~p~i~W~k~g~~l~~~--~~~~~~-~---~~L~i~~v~~~D~G~Y~C~A~N~~G~~~~~-a~L~V~~ 383 (384)
T 3kld_A 322 RPKPTYRWLKNGDPLLTR--DRIQIE-Q---GTLNITIVNLSDAGMYQCVAENKHGVIFSS-AELSVIA 383 (384)
T ss_dssp ESCCEEEEEETTEECCCB--TTEEEE-T---TEEEESSCCGGGCEEEEEEEEETTEEEEEE-EEEEEC-
T ss_pred cCCCeEEEEECCEECCCC--ccEEEe-C---CEEEEeecChhhCEEEEEEEEeCCceEEec-eEEEEec
Confidence 999999999999988764 455432 3 589999999999999999999999999888 8888764
No 10
>2yd9_A Receptor-type tyrosine-protein phosphatase S; hydrolase; HET: NAG B3P; 2.60A {Homo sapiens}
Probab=99.95 E-value=3.3e-26 Score=167.43 Aligned_cols=194 Identities=27% Similarity=0.450 Sum_probs=137.7
Q ss_pred ceeeEEEeeccCCCcceecccccCC-------CCCeEEeCCCccEEeeCCeEEEEcccCCCCCCcEEEEeCCEEecCCC-
Q psy2441 3 IGTYIKIKPNLFSPLSVYSADKIPP-------GFPQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREMLPVDTSR- 74 (212)
Q Consensus 3 ~g~Y~C~~~~~~~~~~~~~~~~~~~-------~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~k~g~~l~~~~- 74 (212)
+|.|+|.+.|..+..... ..+.+. ..|.+...+....+.+|+.+.|.|.+.+.|.+.+.|+|+|..+....
T Consensus 76 ~G~Y~C~a~n~~g~~~~~-~~l~V~~~~~~p~~~p~i~~~~~~~~v~~g~~v~l~C~~~g~p~~~v~W~k~~~~~~~~~~ 154 (304)
T 2yd9_A 76 ENVYECVAQNSVGEITVH-AKLTVLREDQLPSGFPNIDMGPQLKVVERTRTATMLCAASGNPDPEITWFKDFLPVDPSAS 154 (304)
T ss_dssp CSEEEEEEECSSCEECCE-EEEEEECGGGCCTTCCEEEECCCCEEEETTSCEEECCEEECSSCCEEEEEETTEECCGGGG
T ss_pred CeEEEEEEECCCCeEEEE-EEEEEeccccCCCCCCeeecCCccEEEeCCCeEEEEEECccCCCCeEEEEECCEECcCCCC
Confidence 589999999988764322 233332 22788888888899999999999999999999999999998875421
Q ss_pred --------CCeeEEeec--CCCCeEEEeeeCCc-------cceeEEeecCCCCCCCccccCCcceeEecCCcEEEEEeee
Q psy2441 75 --------NPRYNLLTS--GAPGTYIKIKPNLF-------SPLSVYSADKIPPGFPQITEAPSTKVVEISHTTVLHCSAS 137 (212)
Q Consensus 75 --------~~~~~~~~~--~~~g~~l~i~~~~~-------~~~~v~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~ 137 (212)
...+.+... +|.|.|.|...+.. ..+.|.. ...+|.+...+....+.+|+.+.|.|.+.
T Consensus 155 ~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~l~v~~----~~~~P~~~~~~~~~~v~~G~~v~l~C~~~ 230 (304)
T 2yd9_A 155 NGRIKQLRSGALQIESSEETDQGKYECVATNSAGVRYSSPANLYVRV----QNVAPRFSILPMSHEIMPGGNVNITCVAV 230 (304)
T ss_dssp TTSEEECTTSCEEECSCCGGGCEEEEEEEEETTEEEECCCEEEEEEC----CCEEEEEEECCCCBCCCTTCCEEEEEEEE
T ss_pred cceEEeCCCeEEEEccCCcccCEEEEEEEEeCCCCEEeccEEEEEEe----eccCCcEEecCCceEEcCCCeEEEEEEEe
Confidence 123333332 47889999877622 2333321 11236666666667788999999999999
Q ss_pred eCCCCceEEEeCCEEecCCCCCceEEcCCCCceeEEEcCCCCCCCeeEEEEEEcccccceecceEEEEeccee
Q psy2441 138 GNPPPKISWIREMLPVDTSRNPRYNLLTSGAPGALQITNSIEEDQGKYECVAENEVGTEYSPSTMLYVKGTQV 210 (212)
Q Consensus 138 ~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~n~~g~~~~~~~~l~v~~~~~ 210 (212)
+.|.|.+.|++++..+... .++. .+...|.+.++ +|+|.|+|.|.|..|..... +.|.|++...
T Consensus 231 g~p~p~v~W~~~~~~l~~~--~~~~----~~~~~L~i~~~--~d~G~Y~C~a~N~~G~~~~~-~~l~V~~~~~ 294 (304)
T 2yd9_A 231 GSPMPYVKWMQGAEDLTPE--DDMP----VGRNVLELTDV--KDSANYTCVAMSSLGVIEAV-AQITVKSLPK 294 (304)
T ss_dssp EESCCEEEEEETTEECSCS--SSCC----BSEEEEEECSC--CSCEEEEEEEEETTEEEEEE-EEEC------
T ss_pred eeCCCEEEEEECCEECCCc--cccc----CCcEEEEEccc--ccCEEEEEEEEeCCCcEEEE-EEEEEecCcc
Confidence 9999999999999988764 1111 11245777665 68999999999999999877 8888876543
No 11
>2j8h_A Titin, connectin; cardiomyopathy, nuclear protein, serine/threonine-protein KI LIMB-girdle muscular dystrophy, phosphorylation; 1.99A {Homo sapiens} PDB: 2j8o_A 2ill_A
Probab=99.94 E-value=2.1e-25 Score=153.16 Aligned_cols=174 Identities=21% Similarity=0.308 Sum_probs=130.3
Q ss_pred CCCeEEeCCCccEEeeCCeEEEEcccCCCCCCcEEEEeCCEEecCCCCCe------------eEEeec--CCCCeEEEee
Q psy2441 28 GFPQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREMLPVDTSRNPR------------YNLLTS--GAPGTYIKIK 93 (212)
Q Consensus 28 ~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~k~g~~l~~~~~~~------------~~~~~~--~~~g~~l~i~ 93 (212)
.+|.|...+....+.+|+.+.|.|.+.+.|.+.+.|+|+|..+.... .+ +.+... +|.|.|.|..
T Consensus 3 ~~P~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~-~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~ 81 (197)
T 2j8h_A 3 MAPHFKEELRNLNVRYQSNATLVCKVTGHPKPIVKWYRQGKEIIADG-LKYRIQEFKGGYHQLIIASVTDDDATVYQVRA 81 (197)
T ss_dssp CCCEEEECCCCEEEETTSCEEEEEEEECSSCCEEEEEETTEECCCCS-SSEEEEEETTTEEEEEECSCCGGGCSEEEEEE
T ss_pred CCCEEEEcCCccEEcCCCEEEEEEEEeecCCCEEEEEECCEECccCC-CcEEEEEcCCCEEEEEECcCCHHhCEEEEEEE
Confidence 58899999999999999999999999999999999999998886531 22 222222 3788888876
Q ss_pred eC------CccceeEEeecCCCCCCCccccCCcceeEecCCcEEEEEeeeeCCCCceEEEeCCEEecCCCCCceEEcCCC
Q psy2441 94 PN------LFSPLSVYSADKIPPGFPQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREMLPVDTSRNPRYNLLTSG 167 (212)
Q Consensus 94 ~~------~~~~~~v~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~ 167 (212)
.. ....+.|....... .|.+...+....+.+|+.+.|.|.+.+.|.|.+.|++++..+... .++......
T Consensus 82 ~n~~g~~~~~~~l~V~~~p~~~--~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~~--~~~~~~~~~ 157 (197)
T 2j8h_A 82 TNQGGSVSGTASLEVEVPAKIH--LPKTLEGMGAVHALRGEVVSIKIPFSGKPDPVITWQKGQDLIDNN--GHYQVIVTR 157 (197)
T ss_dssp EETTEEEEEEEEEEEEEEEEEC--CSSCBTTBEEEEEETTCCCEEEEEEEEESCCEEEEEESSCEECSS--SSCEEEECS
T ss_pred EECCCceeEEEEEEEcCCCcCC--CCccccccCeEEEeCCCEEEEEEEEEecCCCcEEEEECCEEeecC--CCEEEEEcC
Confidence 65 22334443321111 122233334567888999999999999999999999999988764 455554444
Q ss_pred CceeEEEcC-CCCCCCeeEEEEEEcccccceecceEEEEec
Q psy2441 168 APGALQITN-SIEEDQGKYECVAENEVGTEYSPSTMLYVKG 207 (212)
Q Consensus 168 ~~~~l~i~~-~~~~d~g~y~C~a~n~~g~~~~~~~~l~v~~ 207 (212)
....|.|.+ +..+|.|.|.|.|.|..|..... +.|.|.+
T Consensus 158 ~~~~L~i~~~~~~~d~G~Y~C~a~N~~g~~~~~-~~l~V~d 197 (197)
T 2j8h_A 158 SFTSLVFPNGVERKDAGFYVVCAKNRFGIDQKT-VELDVAD 197 (197)
T ss_dssp SEEEEECTTCCCGGGCEEEEEEEEETTEEEEEE-EEEEEEC
T ss_pred CceEEEEeCCCCcccCEeEEEEEEeCCCcEeEE-EEEEEeC
Confidence 447999999 99999999999999999998766 7777753
No 12
>1itb_B Type 1 interleukin-1 receptor; immunoglobulin fold, transmembrane, glycoprotein, signal, complex (immunoglobulin/receptor); 2.50A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ira_Y* 4dep_B* 1g0y_R
Probab=99.94 E-value=1.4e-25 Score=164.75 Aligned_cols=204 Identities=16% Similarity=0.234 Sum_probs=140.9
Q ss_pred ceeeEEEeeccCCCcceecccccCCCCCeEEeCCC---ccEEeeCCeEEEEccc------CCCCCCcEEEEeCCEEecCC
Q psy2441 3 IGTYIKIKPNLFSPLSVYSADKIPPGFPQITEAPS---TKVVEISHTTVLHCSA------SGNPPPKISWIREMLPVDTS 73 (212)
Q Consensus 3 ~g~Y~C~~~~~~~~~~~~~~~~~~~~~p~~~~~~~---~~~v~~g~~v~l~C~~------~~~p~~~v~W~k~g~~l~~~ 73 (212)
+|.|+|.+.|..+.............+|.+...+. ...+.+|+.+.|.|.+ .+.|.+.+.|+|+|.++...
T Consensus 74 ~G~Y~C~a~n~~g~~~~~~~v~v~~~~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~g~p~~~i~W~k~~~~l~~~ 153 (315)
T 1itb_B 74 SGHYYCVVRNSSYCLRIKISAKFVENEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPLLLD 153 (315)
T ss_dssp CSCCEECCCSSSCCCCEECCCEEECCCTTSSSCGGGEEEEEEETTSCEEEECSSCTTTCTTTTCCCCCEEEETTEECCCC
T ss_pred CEEEEEEEeCCceEEEEEEEEEEeCCCCCcccccccccceEEecCCCeEEEEecccccccCCCCCCEEEEEECCEECCCc
Confidence 58999999998876554433222244555433322 3567889999999998 88899999999999988543
Q ss_pred C------CCeeEEeec--CCCCeEEEeee-CC-------ccceeEEeecCCCCCCCccccCCcc-eeEecCCcEEEEEee
Q psy2441 74 R------NPRYNLLTS--GAPGTYIKIKP-NL-------FSPLSVYSADKIPPGFPQITEAPST-KVVEISHTTVLHCSA 136 (212)
Q Consensus 74 ~------~~~~~~~~~--~~~g~~l~i~~-~~-------~~~~~v~~~~~~~~~~p~~~~~~~~-~~~~~g~~~~l~C~~ 136 (212)
. ...+.+... +|.|.|.|... .. ...+.+.........+|.+...+.. ..+.+|+.+.|.|.+
T Consensus 154 ~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~~n~~g~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~g~~v~l~C~~ 233 (315)
T 1itb_B 154 NIHFSGVKDRLIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFITLEENKPTRPVIVSPANETMEVDLGSQIQLICNV 233 (315)
T ss_dssp SSSEEEETTEEEESSCCGGGCEEEEEEEEEEETTEEEEEEEEEEEEEECCCCCCCCEECSCCSEEEECCSSSCEEEEEEE
T ss_pred cceEeecCceEEEEeceehhCcEEEEEEEcCCCCcEEEEEEEEEEEEecCCCCCCCEEecCCCCcEEEeCCCcEEEEEEE
Confidence 1 233333332 48899999887 31 1122222222122344666655543 568899999999999
Q ss_pred eeCCCCceEEEeCCEEecCCCCC---ceEEcCCC-------CceeEEEcCCCCCC-CeeEEEEEEcccccceecceEEEE
Q psy2441 137 SGNPPPKISWIREMLPVDTSRNP---RYNLLTSG-------APGALQITNSIEED-QGKYECVAENEVGTEYSPSTMLYV 205 (212)
Q Consensus 137 ~~~p~~~i~W~~~~~~~~~~~~~---~~~~~~~~-------~~~~l~i~~~~~~d-~g~y~C~a~n~~g~~~~~~~~l~v 205 (212)
.+.|.|.+.|++++..+...... .+....+. ....|.|.++..+| +|.|.|.|.|..|..... +.|.|
T Consensus 234 ~g~P~p~i~W~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~~G~Y~C~a~N~~G~~~~~-~~l~v 312 (315)
T 1itb_B 234 TGQLSDIAYWKWNGSVIDEDDPVLGEDYYSVENPANKRRSTLITVLNISEIESRFYKHPFTCFAKNTHGIDAAY-IQLIY 312 (315)
T ss_dssp EECTTSEEEEEETTEECCTTCSSEEEEEEEECCSSCGGGEEEEEEEEESSCCGGGGTSCEEEEEECTTCCEEEE-EEEEC
T ss_pred ecCCCCeeEEEECCEECCcccccccccceeeeccCCCceeEEEEEEEEeecCHHHcCCceEEEEecCCCceeEE-EEEEe
Confidence 99999999999999988765211 11111110 12489999999999 999999999999999877 87777
Q ss_pred ec
Q psy2441 206 KG 207 (212)
Q Consensus 206 ~~ 207 (212)
++
T Consensus 313 ~~ 314 (315)
T 1itb_B 313 PV 314 (315)
T ss_dssp CC
T ss_pred cC
Confidence 64
No 13
>3p3y_A Neurofascin; IG domains, cell adhesion; HET: NAG; 2.60A {Homo sapiens} PDB: 3p40_A*
Probab=99.94 E-value=9e-26 Score=170.96 Aligned_cols=194 Identities=19% Similarity=0.317 Sum_probs=139.9
Q ss_pred ceeeEEEeeccCCCcceecc--ccc-------CCCCCeEEeCC---CccEEeeCCeEEEEcccCCCCCCcEEEEeCCEEe
Q psy2441 3 IGTYIKIKPNLFSPLSVYSA--DKI-------PPGFPQITEAP---STKVVEISHTTVLHCSASGNPPPKISWIREMLPV 70 (212)
Q Consensus 3 ~g~Y~C~~~~~~~~~~~~~~--~~~-------~~~~p~~~~~~---~~~~v~~g~~v~l~C~~~~~p~~~v~W~k~g~~l 70 (212)
+|.|+|.+.|..+....... .+. ...+|.+.... ....+.+|+.+.|.|.+.+.|.+.+.|+|+|..+
T Consensus 184 ~G~Y~C~a~n~~~~~~~~~~~~~l~v~~~~~~~~~~p~~~~~~~~~~~~~~~~G~~v~l~C~~~g~p~~~v~W~~~~~~~ 263 (404)
T 3p3y_A 184 QTDYSCNARFHFTHTIQQKNPFTLKVLTTRGVAERTPSFMYPQGTASSQMVLRGMDLLLECIASGVPTPDIAWYKKGGDL 263 (404)
T ss_dssp SSCBEEEEECTTTCCEEECCCBCEEEECCSCCCCCCCCBSSSCSSEEEEEEETTSCEEEECCBCCSSCCEEEEEETTBCC
T ss_pred CcceEEEEEeccccceeccCceeEEEeccCCccccCCccccccCCCCCceEecCCCEEEEEEECCCCCCcEEEEECCEEC
Confidence 48999999997775322211 111 12344443322 3456889999999999999999999999999887
Q ss_pred cCCC------CCeeEEeec--CCCCeEEEeeeCC------ccceeEEeecCCCCCCCccccCCcceeEecCCcEEEEEee
Q psy2441 71 DTSR------NPRYNLLTS--GAPGTYIKIKPNL------FSPLSVYSADKIPPGFPQITEAPSTKVVEISHTTVLHCSA 136 (212)
Q Consensus 71 ~~~~------~~~~~~~~~--~~~g~~l~i~~~~------~~~~~v~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~ 136 (212)
.... ...+.+... +|.|.|.|...+. ...+.|... |.+...+....+.+|+.+.|.|.+
T Consensus 264 ~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~-------p~~~~~~~~~~v~~g~~~~l~C~~ 336 (404)
T 3p3y_A 264 PSDKAKFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAA-------PYWLDEPKNLILAPGEDGRLVCRA 336 (404)
T ss_dssp CTTTEEEEGGGTEEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEEEEE-------EEEEECCCCEEECTTCCEEEECEE
T ss_pred CCCcccccccCceEEEccCCHhHCEEEEEEEEeCCCcEEEEEEEEEeCC-------CeeeccCCcceeecCCcEEEEEEc
Confidence 6542 123334332 4889999988762 223333332 666667777888999999999999
Q ss_pred eeCCCCceEEEeCCEEecCCCCCceEEcCCCCceeEEEcCCCCCCCeeEEEEEEcccccceecceEEEEec
Q psy2441 137 SGNPPPKISWIREMLPVDTSRNPRYNLLTSGAPGALQITNSIEEDQGKYECVAENEVGTEYSPSTMLYVKG 207 (212)
Q Consensus 137 ~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~n~~g~~~~~~~~l~v~~ 207 (212)
.+.|.|.+.|++++..+............+ ..|.|.++..+|+|.|.|.|.|..|..... +.|.|.+
T Consensus 337 ~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~---~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~-~~l~V~d 403 (404)
T 3p3y_A 337 NGNPKPTVQWMVNGEPLQSAPPNPNREVAG---DTIIFRDTQISSRAVYQCNTSNEHGYLLAN-AFVSVLD 403 (404)
T ss_dssp EEESCCEEEEEETTEEGGGSCCCTTEEEET---TEEEESSCCSSCCCEEEEEEEETTEEEEEE-EEEEEC-
T ss_pred cccCCCceEEEECCEecCCCCCCceEEecC---CEEEEeecCHHHCEEEEEEEEeCCCcEEEE-EEEEEEe
Confidence 999999999999999987652111112223 589999999999999999999999999877 7777754
No 14
>3qs7_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, CY receptor complex, extracellular complex; HET: NAG; 4.30A {Homo sapiens}
Probab=99.94 E-value=3.4e-26 Score=174.43 Aligned_cols=193 Identities=11% Similarity=0.055 Sum_probs=131.1
Q ss_pred ceeeEEEeeccCCCcceecccccCCCCCeEEeCCCccEEeeCCeEEEEcccCC-CCCCcEEEEeCCEEecCCC-------
Q psy2441 3 IGTYIKIKPNLFSPLSVYSADKIPPGFPQITEAPSTKVVEISHTTVLHCSASG-NPPPKISWIREMLPVDTSR------- 74 (212)
Q Consensus 3 ~g~Y~C~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~-~p~~~v~W~k~g~~l~~~~------- 74 (212)
+|.|+|.|.|..|........+.+..+|.+ .+....+.+|+.+.|.|.+.+ .|.+.|+|+|+|..+....
T Consensus 203 ~G~Y~C~A~N~~G~~~~~~~~l~V~~~p~~--~~~~~~v~~G~~v~L~C~~~g~~p~p~i~W~k~g~~l~~~~~~~~~~~ 280 (423)
T 3qs7_E 203 GTDIRCCARNELGRECTRLFTIDLNQTPQT--TLPQLFLKVGEPLWIRCKAVHVNHGFGLTWELENKALEEGNYFEMSTY 280 (423)
T ss_dssp SSCEEEEEECSSCEEEEECEEEESSSCCCS--STTEEEEETTSCEEEEEEEEESSSCCCEEEEESSSBCCGGGEEEEEEE
T ss_pred CeEEEEEEEcCCCCcceeeEEEEEecCCcc--CCCceEEeCCCeEEEEEEEEcCCCCcEEEEEECCEEccccceeecccc
Confidence 588999999998875544344555555554 455778899999999999988 6778999999998764420
Q ss_pred -C-------CeeEEeec--CCCCeEEEeeeCC---ccceeEEeecCCCCCCCccccCC--cceeEecCCcEEEEEeeeeC
Q psy2441 75 -N-------PRYNLLTS--GAPGTYIKIKPNL---FSPLSVYSADKIPPGFPQITEAP--STKVVEISHTTVLHCSASGN 139 (212)
Q Consensus 75 -~-------~~~~~~~~--~~~g~~l~i~~~~---~~~~~v~~~~~~~~~~p~~~~~~--~~~~~~~g~~~~l~C~~~~~ 139 (212)
. ..+.+... +|.|.|.|.+.+. .+.+.|.. +|.+...+ ....+.+|+.+.|.|.+.+.
T Consensus 281 ~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~N~~~~~~~L~V~~-------~p~i~~~~~~~~~~v~~G~~v~l~C~~~g~ 353 (423)
T 3qs7_E 281 STNRTMIRILFAFVSSVARNDTGYYTCSSSKHPSQSALVTIVE-------KGFINATNSSEDYEIDQYEEFCFSVRFKAY 353 (423)
T ss_dssp ETTTEEEEEEEEEESSCCTTTCEEEEEEETTEEEEEEEEEEES-------SCEEEEC---CEECCCTTCCCCEEEEEEEE
T ss_pred cCCceeEEEEEEEEeecCHHHCEEEEEEEecCCCceEEEEEEe-------CCcceEcCCCccEEecCCCeEEEEEEEEEc
Confidence 0 01222222 4899999998875 22233332 14443333 34567789999999999999
Q ss_pred CCCceEEEeCCEEecCCCCCceEEcCCCCceeEEEcCCCCCCCeeEEEEEEcccccceecceEEEEecceec
Q psy2441 140 PPPKISWIREMLPVDTSRNPRYNLLTSGAPGALQITNSIEEDQGKYECVAENEVGTEYSPSTMLYVKGTQVD 211 (212)
Q Consensus 140 p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~n~~g~~~~~~~~l~v~~~~~p 211 (212)
|.|.+.|++++..+..... ...+. ..+.......+|+|.|+|.|.|..|..... +.|.|++.+++
T Consensus 354 P~p~i~W~k~g~~l~~~~~----~~~~~--~~~~~~~~~~~D~G~YtC~A~N~~G~~~~s-~~L~v~~~p~~ 418 (423)
T 3qs7_E 354 PQIRCTWTFSRKSFPCEQK----GLDNG--YSISKFCNHKHQPGEYIFHAENDDAQFTKM-FTLNIRSGTKH 418 (423)
T ss_dssp SCCEEEEEETTEEEECBCC----BCSSS--SEEEEECCCTTCCSCEEEEEEETTEEEEEE-EEEC-------
T ss_pred CCCeEEEEECCEECCCccc----cccCC--cEEEEEecccccCEEEEEEEEcCCceEEEE-EEEEEecCCcc
Confidence 9999999999999876411 00010 222234566789999999999999999877 88888877654
No 15
>2a38_A Titin; Z1Z2, structural protein; 2.00A {Homo sapiens} PDB: 1ya5_A 2f8v_A
Probab=99.94 E-value=1.9e-25 Score=153.05 Aligned_cols=173 Identities=24% Similarity=0.349 Sum_probs=131.4
Q ss_pred CCCCeEEeCCCccEEeeCCeEEEEcccCCCCCCcEEEEeCCEEecCCCCCe-----------eEEeec--CCCCeEEEee
Q psy2441 27 PGFPQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREMLPVDTSRNPR-----------YNLLTS--GAPGTYIKIK 93 (212)
Q Consensus 27 ~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~k~g~~l~~~~~~~-----------~~~~~~--~~~g~~l~i~ 93 (212)
..+|.+...+....+.+|+.+.|.|.+.+.|.+.+.|+|+|..+......+ +.+... .|.|.|.|..
T Consensus 3 ~~~P~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~ 82 (194)
T 2a38_A 3 TQAPTFTQPLQSVVVLEGSTATFEAHISGFPVPEVSWFRDGQVISTSTLPGVQISFSDGRAKLTIPAVTKANSGRYSLKA 82 (194)
T ss_dssp CEEEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEESSSBCCTTTSTTCEEEEETTEEEEEESSCCGGGCEEEEEEE
T ss_pred CCCCeEEccCCceEEECCCEEEEEEEEEecCCCEEEEEECCEEcccccCCceEEEeCCCEEEEEECCCCcccCEEEEEEE
Confidence 357888888899999999999999999988999999999998876542111 222222 3788888877
Q ss_pred eCCc------cceeEEeecCCCCCCCccccCCcceeEecCCcEEEEEeeeeCCCCceEEEeCCEEecCCCCCceEEcCCC
Q psy2441 94 PNLF------SPLSVYSADKIPPGFPQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREMLPVDTSRNPRYNLLTSG 167 (212)
Q Consensus 94 ~~~~------~~~~v~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~ 167 (212)
.... ..+.|.. ...+|.+...+....+..|+.+.|.|.+.+.|.+.+.|++++..+... .++....++
T Consensus 83 ~n~~~~~~~~~~l~v~~----~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~--~~~~~~~~~ 156 (194)
T 2a38_A 83 TNGSGQATSTAELLVKA----ETAPPNFVQRLQSMTVRQGSQVRLQVRVTGIPTPVVKFYRDGAEIQSS--LDFQISQEG 156 (194)
T ss_dssp EETTEEEEEEEEEEEEC----CCEEEEEEECCCCEEECTTEEEEEEEEEEEESCCEEEEEETTEECCCS--SSEEEEEET
T ss_pred EcCCceEeEEEEEEEcc----CCCCCEEEeCCccEEEcCCCEEEEEEEEEEecCCeEEEEECCEECCCC--CcEEEEEcC
Confidence 5522 1222221 122356666666677889999999999999999999999999988764 455555444
Q ss_pred CceeEEEcCCCCCCCeeEEEEEEcccccceecceEEEEe
Q psy2441 168 APGALQITNSIEEDQGKYECVAENEVGTEYSPSTMLYVK 206 (212)
Q Consensus 168 ~~~~l~i~~~~~~d~g~y~C~a~n~~g~~~~~~~~l~v~ 206 (212)
....|.|.++..+|.|.|.|.|.|..|..... +.|.|+
T Consensus 157 ~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~-~~l~V~ 194 (194)
T 2a38_A 157 DLYSLLIAEAYPEDSGTYSVNATNSVGRATST-AELLVQ 194 (194)
T ss_dssp TEEEEEEEEECGGGCEEEEEEEEETTEEEEEE-EEEEEC
T ss_pred CEEEEEECCCChhcCeEEEEEEEeCCCceEEE-EEEEEC
Confidence 34589999999999999999999999988776 777764
No 16
>2o26_X MAST/stem cell growth factor receptor; stem cell factor, receptor tyrosine kinase, class III, recep ligand complex, cytokine, 4-helix bundle; HET: NAG FUL MAN NDG; 2.50A {Mus musculus}
Probab=99.93 E-value=1.8e-25 Score=162.47 Aligned_cols=197 Identities=15% Similarity=0.140 Sum_probs=135.2
Q ss_pred ceeeEEEeeccCCCcceecccccCCCCCeEEeCCCccEEeeCCeEEEEcccCCCCC-CcEEEE-eCCEEecCCC------
Q psy2441 3 IGTYIKIKPNLFSPLSVYSADKIPPGFPQITEAPSTKVVEISHTTVLHCSASGNPP-PKISWI-REMLPVDTSR------ 74 (212)
Q Consensus 3 ~g~Y~C~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~-~~v~W~-k~g~~l~~~~------ 74 (212)
+|.|+|.+.| +. .....+.+..+|.+...+....+.+|+.+.|.|.+.+ |. +.+.|+ ++|..+....
T Consensus 69 ~G~Y~C~~~n--g~--~~~~~l~V~~~~~~~~~~~~~~~~~g~~v~l~C~~~~-p~~~~v~W~~~~g~~l~~~~~~~~~~ 143 (290)
T 2o26_X 69 TGTYTCSNSN--GL--TSSIYVFVRDPAKLFLVGLPLFGKEDSDALVRCPLTD-PQVSQYSLIECDGKSLPTDLTFVPNP 143 (290)
T ss_dssp CEEEEEEESS--SC--EEEEEEEEECSSCCBCCCCCEEEETTSCEEECCCBSC-CSCEEEEEEETTSCCCCTTCEEEEET
T ss_pred CeEEEEEeeC--Cc--cEEEEEEEeCCCcccccccceEEecCCeEEEeCcCCC-CCCceEEEEeCCCcCCCCCCceeeCC
Confidence 5999999999 32 3334455555565556677788999999999999986 77 899995 6887775431
Q ss_pred CCeeEEeec--CCCC-eEEEeeeCC-------ccceeEEeecCCCCCCCccccCCcceeEecCCcEEEEEeeeeCCCCc-
Q psy2441 75 NPRYNLLTS--GAPG-TYIKIKPNL-------FSPLSVYSADKIPPGFPQITEAPSTKVVEISHTTVLHCSASGNPPPK- 143 (212)
Q Consensus 75 ~~~~~~~~~--~~~g-~~l~i~~~~-------~~~~~v~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~- 143 (212)
...+.+... +|.| .|.|...+. ...+.|... ...+|.+...+....+.+|+.+.|.|.+.+.|.|.
T Consensus 144 ~~~L~i~~v~~~d~G~~Y~C~a~n~~~~~~s~~~~l~V~~~---~~~~P~i~~~~~~~~v~~G~~v~l~C~~~g~p~p~~ 220 (290)
T 2o26_X 144 KAGITIKNVKRAYHRLCVRCAAQRDGTWLHSDKFTLKVREA---IKAIPVVSVPETSHLLKKGDTFTVVCTIKDVSTSVN 220 (290)
T ss_dssp TTEEEEESCCGGGTTCEEEEEEEETTEEEECCCEEEEEECC---CCSCCEEECSCSBCCCCTTCCEEEEEEEEESSTTCE
T ss_pred CCCEEEecccHHHCCCEEEEEEEECCceEEeEEEEEEEEeC---CCCCCccccCCCcceEecCCcEEEEEEEecCCccee
Confidence 123333332 4889 999988762 223333321 22347777676667888999999999999999996
Q ss_pred eEEEeCCEEe----cCCCCCceEEc-CCCCceeEEEcCCCCCCCeeEEEEEEcccccceecceEEEEecc
Q psy2441 144 ISWIREMLPV----DTSRNPRYNLL-TSGAPGALQITNSIEEDQGKYECVAENEVGTEYSPSTMLYVKGT 208 (212)
Q Consensus 144 i~W~~~~~~~----~~~~~~~~~~~-~~~~~~~l~i~~~~~~d~g~y~C~a~n~~g~~~~~~~~l~v~~~ 208 (212)
+.|++++..+ .......+... .......|.|.++..+|+|.|.|.|.|..|..... +.|.|.++
T Consensus 221 i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~N~~g~~~~~-~~l~V~~~ 289 (290)
T 2o26_X 221 SMWLKMNPQPQHIAQVKHNSWHRGDFNYERQETLTISSARVDDSGVFMCYANNTFGSANVT-TTLKVVEK 289 (290)
T ss_dssp EEEEEESSSEEECCCEECCEEEEETTEEEEEEEEEESSCCSSSCEEEEEEEECSSCEEEEE-EEECC---
T ss_pred EEEecCCCCCccceeecccccccCceeeEEEEEEEEcCCCcccCeEEEEEEeCCCCcEEEE-EEEEEEeC
Confidence 9999988763 22111111100 00113789999999999999999999999988655 66665543
No 17
>3k0w_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1, isoform 2; hydrolase, immunoglobulin domain, nucleus, protease; 2.80A {Homo sapiens}
Probab=99.93 E-value=2.5e-24 Score=150.28 Aligned_cols=172 Identities=23% Similarity=0.358 Sum_probs=132.6
Q ss_pred CCCCeEEeCCCccEEeeCCeEEEEcccCCCCCCcEEEEeCCEEecCCCCCeeEEeec--CCCCeEEEeeeCC-------c
Q psy2441 27 PGFPQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREMLPVDTSRNPRYNLLTS--GAPGTYIKIKPNL-------F 97 (212)
Q Consensus 27 ~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~k~g~~l~~~~~~~~~~~~~--~~~g~~l~i~~~~-------~ 97 (212)
...+.|...|....+.+|+.+.|.|.+.+.|.+.+.|+|++..+.......+.+... .|.|.|.|..... .
T Consensus 16 ~~~~~i~~~p~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~n~~~~~~s~~ 95 (218)
T 3k0w_A 16 PRGSKITVNPESKAVLAGQFVKLCCRATGHPFVQYQWFKMNKEIPNGNTSELIFNAVHVKDAGFYVCRVNNNFTFEFSQW 95 (218)
T ss_dssp ---CCEEECCCCEEEETTSBEEEECEETTTTSSEEEEEETTEECTTCCSSEEEETTCCGGGCEEEEEEEECTTCCEECCC
T ss_pred CCCCEEEECCCCeEEeCCCcEEEEeeecCCCCCEEEEEECCEECCCCCCCEEEEccCChhhCeEeEEEEEcCCCCceeeE
Confidence 467888999999999999999999999999999999999999987765555666544 4899999988762 1
Q ss_pred cceeEEeecC--------CCCCCCccccCCcceeEecCCcEEEEEeeeeCCCCceEEEeCCEEecCCCCCceEEcCCCCc
Q psy2441 98 SPLSVYSADK--------IPPGFPQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREMLPVDTSRNPRYNLLTSGAP 169 (212)
Q Consensus 98 ~~~~v~~~~~--------~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~ 169 (212)
..+.|..... .+...|.+...+....+..|+.+.|.|.+.+.|.+.+.|++++..+.... .
T Consensus 96 ~~l~V~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~v~W~~~~~~~~~~~--------~--- 164 (218)
T 3k0w_A 96 SQLDVCDIPESFQRSVDGVSESKLQICVEPTSQKLMPGSTLVLQCVAVGSPIPHYQWFKNELPLTHET--------K--- 164 (218)
T ss_dssp EEEEEECCCGGGCTTCCSBCCSSCEEEECCCCEEECTTCCEEEECEEEBSSCCEEEEEETTEECTTCC--------S---
T ss_pred EEEEEEccCcccccccccccCCCceEEECCCceeecCCCcEEEEEEecccCCCeEEEEECCEECCCCC--------C---
Confidence 3344433210 01122556666667788999999999999999999999999998876531 1
Q ss_pred eeEEEcCCCCCCCeeEEEEEEcccccceecceEEEEecce
Q psy2441 170 GALQITNSIEEDQGKYECVAENEVGTEYSPSTMLYVKGTQ 209 (212)
Q Consensus 170 ~~l~i~~~~~~d~g~y~C~a~n~~g~~~~~~~~l~v~~~~ 209 (212)
..|.|.++..+|.|.|+|.|.|..|......+.|.|....
T Consensus 165 ~~L~i~~v~~~d~G~Y~C~a~n~~g~~~s~~~~l~V~~~~ 204 (218)
T 3k0w_A 165 KLYMVPYVDLEHQGTYWCHVYNDRDSQDSKKVEIIIDELN 204 (218)
T ss_dssp SEEEESSCCGGGCEEEEEEEECSSCEEECCCEEEEECC--
T ss_pred CEEEEeecChhcCEEEEEEEEcCCCCceeeeEEEEEeCCc
Confidence 6899999999999999999999988866655888887643
No 18
>2iep_A Muscle-specific kinase receptor; beta-sandwich, signaling protein,transferase; 2.21A {Rattus norvegicus}
Probab=99.93 E-value=4e-25 Score=151.15 Aligned_cols=169 Identities=32% Similarity=0.535 Sum_probs=130.2
Q ss_pred CCCCeEEeCCCccEEeeCCeEEEEcccCCCCCCcEEEEeCCEEecCCCCCe---------eEEeec--CCCCeEEEeeeC
Q psy2441 27 PGFPQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREMLPVDTSRNPR---------YNLLTS--GAPGTYIKIKPN 95 (212)
Q Consensus 27 ~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~k~g~~l~~~~~~~---------~~~~~~--~~~g~~l~i~~~ 95 (212)
..+|.+...+....+.+|+.+.|.|.+.+.|.+.+.|+|+|..+... ..+ +.+... +|.|.|.|....
T Consensus 5 ~~~P~i~~~~~~~~~~~G~~v~l~C~~~~~p~~~i~W~~~~~~~~~~-~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~ 83 (192)
T 2iep_A 5 PKAPVITTPLETVDALVEEVATFMCAVESYPQPEISWTRNKILIKLF-DTRYSIRENGQLLTILSVEDSDDGIYCCTANN 83 (192)
T ss_dssp CEEEEESSCCCEEEEETTSCEEEECCEEEESCCEEEEEETTEECCTT-CTTEEEEGGGTEEEESSCCGGGCEEEEEEEEC
T ss_pred CCCceeecCccceeeeCCCcEEEEeeCCCCCCCeEEEEECCEEcccc-CccEEEcCCccEEEEcCCCcccCeEEEEEEEc
Confidence 35677777788888999999999999998899999999999887642 122 233222 378889888765
Q ss_pred Cc-------cceeEEeecCCCCCCCccccCCcceeEecCCcEEEEEeeeeCCCCceEEEeCCEEecCCCCCceEEcCCCC
Q psy2441 96 LF-------SPLSVYSADKIPPGFPQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREMLPVDTSRNPRYNLLTSGA 168 (212)
Q Consensus 96 ~~-------~~~~v~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~ 168 (212)
.. ..+.|... |.+...+....+..|+.+.|.|.+.+.|.+.+.|++++..+... .++....+
T Consensus 84 ~~~~~~~~~~~l~v~~~-------p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~--~~~~~~~~-- 152 (192)
T 2iep_A 84 GVGGAVESCGALQVKMK-------PKITRPPINVKIIEGLKAVLPCTTMGNPKPSVSWIKGDSALREN--SRIAVLES-- 152 (192)
T ss_dssp SSSCCEEEEEEEEEEEE-------EEEEECCCCEEEETTSCEEECCEEEEESCCEEEEEETTEECCCC--SSEEECTT--
T ss_pred CCCceeEeEEEEEEEeC-------CccccCCcceEEeCCCcEEEEEEEeccCCceEEEEeCCEEccCC--CcEEEecC--
Confidence 21 22333322 55566666677889999999999999999999999999888764 45555555
Q ss_pred ceeEEEcCCCCCCCeeEEEEEEcccccceecceEEEEecc
Q psy2441 169 PGALQITNSIEEDQGKYECVAENEVGTEYSPSTMLYVKGT 208 (212)
Q Consensus 169 ~~~l~i~~~~~~d~g~y~C~a~n~~g~~~~~~~~l~v~~~ 208 (212)
+.|.|.++..+|.|.|.|.|.|..|......+.|.|+++
T Consensus 153 -~~L~i~~~~~~d~G~Y~C~a~n~~g~~~s~~~~l~V~~p 191 (192)
T 2iep_A 153 -GSLRIHNVQKEDAGQYRCVAKNSLGTAYSKLVKLEVEVF 191 (192)
T ss_dssp -SCEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEEEC-
T ss_pred -CcEEEecCChhhCEEEEEEEEcCCCcEEEEEEEEEEEeC
Confidence 689999999999999999999999988655588888765
No 19
>3ejj_X Macrophage colony-stimulating factor 1 receptor; growth factor-receptor complex, receptor tyrosine kinase, CY 4-helix bundle, ATP-binding; HET: NAG; 2.40A {Mus musculus} PDB: 4exp_X*
Probab=99.93 E-value=5.1e-25 Score=159.81 Aligned_cols=199 Identities=20% Similarity=0.141 Sum_probs=136.5
Q ss_pred ceeeEEEeeccCCCcceecccccCCCCCe-EEeCCCccEEeeCCeEEEEcccCCCCCCc-EEEEe-CCEEecCCC-----
Q psy2441 3 IGTYIKIKPNLFSPLSVYSADKIPPGFPQ-ITEAPSTKVVEISHTTVLHCSASGNPPPK-ISWIR-EMLPVDTSR----- 74 (212)
Q Consensus 3 ~g~Y~C~~~~~~~~~~~~~~~~~~~~~p~-~~~~~~~~~v~~g~~v~l~C~~~~~p~~~-v~W~k-~g~~l~~~~----- 74 (212)
+|.|+|.+.|..+..... ..+.+..+|. +...+....+.+|+.+.|.|.+.+.+.+. +.|++ ++..+....
T Consensus 63 ~G~Y~C~~~~~~~~~~~~-~~l~V~~~~~~~~~~~~~~~v~~g~~v~L~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~ 141 (289)
T 3ejj_X 63 TGTYRCTELEDPMAGSTT-IHLYVKDPAHSWNLLAQEVTVVEGQEAVLPCLITDPALKDSVSLMREGGRQVLRKTVYFFS 141 (289)
T ss_dssp CEEEEEECCC-----CEE-EEEEECCSSCSEEESCSEEEEETTSCEEECEEESCGGGGGSEEEEEGGGEECCTTCCEEEE
T ss_pred CEEEEEEEeccCCcceeE-EEEEEeCCCcceecccceEEEecCCceEeEEEccCCCcceEEEEEecCCeecCCCccEEEC
Confidence 599999999887764433 4444444444 56777888999999999999998877665 99986 666664431
Q ss_pred -CCeeEEeec--CCCCeEEEeee-C------CccceeEEeecCCCCCCCccccCCcceeEecCCcEEEEEeeee-CCCCc
Q psy2441 75 -NPRYNLLTS--GAPGTYIKIKP-N------LFSPLSVYSADKIPPGFPQITEAPSTKVVEISHTTVLHCSASG-NPPPK 143 (212)
Q Consensus 75 -~~~~~~~~~--~~~g~~l~i~~-~------~~~~~~v~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~-~p~~~ 143 (212)
...+.+... +|.|.|.|... . ....+.|... .+.+|.+...+....+.+|+.+.|.|.+.+ .|.+.
T Consensus 142 ~~~~L~i~~v~~~d~G~Y~C~a~~~~~~~~~~~~~l~V~~~---~~~~p~i~~~~~~~~~~~g~~~~l~C~~~~~~p~~~ 218 (289)
T 3ejj_X 142 PWRGFIIRKAKVLDSNTYVCKTMVNGRESTSTGIWLKVNRV---HPEPPQIKLEPSKLVRIRGEAAQIVCSATNAEVGFN 218 (289)
T ss_dssp TTTEEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEEESS---CCCCCEEEEESSSEECCSSSCEEEEEEEEESSSCCE
T ss_pred CCCCEEEeecccccCEEEEEEEEeCCCccccccEEEEEEEC---CCCCCeEEecCCceEEEeCCcEEEEEEeCCCCCceE
Confidence 123333322 47889999876 3 2233333321 123477777777777788999999999998 78899
Q ss_pred eEEEeCCEEecCCCCCceEEcCC--CCceeEEEcCCCCCCCeeEEEEEEcccccceecceEEEEecc
Q psy2441 144 ISWIREMLPVDTSRNPRYNLLTS--GAPGALQITNSIEEDQGKYECVAENEVGTEYSPSTMLYVKGT 208 (212)
Q Consensus 144 i~W~~~~~~~~~~~~~~~~~~~~--~~~~~l~i~~~~~~d~g~y~C~a~n~~g~~~~~~~~l~v~~~ 208 (212)
+.|++++..+... ........ .....|.|.++..+|.|.|.|.|.|..|..... +.|.+...
T Consensus 219 i~W~~~~~~~~~~--~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~s-~~L~~~~~ 282 (289)
T 3ejj_X 219 VILKRGDTKLEIP--LNSDFQDNYYKKVRALSLNAVDFQDAGIYSCVASNDVGTRTAT-MNFQVVES 282 (289)
T ss_dssp EEEEETTEECCCC--EEEEECSSSEEEEEEEEESSCCSSSCEEEEEEEECSSCEEEEE-EEEECC--
T ss_pred EEEEECCEEeecc--CCcccccceEEeeEEEEEEeecccCCEEEEEEEEcCCCCcccc-EEEEEEec
Confidence 9999999887653 11111011 013789999999999999999999999999877 77766543
No 20
>4fqp_A Poliovirus receptor; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA FUC MAN; 3.60A {Homo sapiens} PDB: 1nn8_R 1dgi_R
Probab=99.93 E-value=2e-25 Score=163.88 Aligned_cols=195 Identities=16% Similarity=0.159 Sum_probs=136.2
Q ss_pred ceeeEEEeeccCCCcceecccccCCCCCeEEeCCCccEEeeCCeEEEEccc-CCCCCCcEEEEeCCEEecCC------CC
Q psy2441 3 IGTYIKIKPNLFSPLSVYSADKIPPGFPQITEAPSTKVVEISHTTVLHCSA-SGNPPPKISWIREMLPVDTS------RN 75 (212)
Q Consensus 3 ~g~Y~C~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~-~~~p~~~v~W~k~g~~l~~~------~~ 75 (212)
+|.|+|++.+...........+.+..+|.+...+....+.+|+.+.+.|.+ .+.|.+.+.|++++..+... ..
T Consensus 91 ~G~Y~C~v~~~~~~~~~~~~~l~v~~~P~~~~~~~~~~~~~~~~~~~~C~~~~~~P~~~i~W~~~~~~~~~~~~~~~~~~ 170 (313)
T 4fqp_A 91 EGNYTCLFVTFPQGSRSVDIWLRVLAKPQNTAEVQKVQLTGEPVPMARCVSTGGRPPAQITWHSDLGGMPNTSQVPGFLS 170 (313)
T ss_dssp CEEEEEEEECSSSCEEEEEEEECCBBCCEEEEEECCBCCCSSCEEEEEEEEEEEBSCCEEEEEETTCCEEEEEEEECSST
T ss_pred CEEEEEEEeeccCcceeeeeeeeeccCCcceecccceEeecCceEEEEEEccCccCCcEEEeecCCccccccceeeeecc
Confidence 599999987654444444455666778888777777777888999999987 47899999999998665321 11
Q ss_pred Cee------EEee--cCCCCeEEEeeeCCc----cceeEEeecCCCCCCCccccCC-cceeEecCCcEEEEEeeeeCCCC
Q psy2441 76 PRY------NLLT--SGAPGTYIKIKPNLF----SPLSVYSADKIPPGFPQITEAP-STKVVEISHTTVLHCSASGNPPP 142 (212)
Q Consensus 76 ~~~------~~~~--~~~~g~~l~i~~~~~----~~~~v~~~~~~~~~~p~~~~~~-~~~~~~~g~~~~l~C~~~~~p~~ 142 (212)
..+ .+.. .+|+|.|.|...... ....+...... +|.+...+ ....+..|+.+.|.|.+.|+|.|
T Consensus 171 ~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~~~~~l~V~~---~P~v~~~~~~~~~~~~g~~v~l~C~~~g~P~p 247 (313)
T 4fqp_A 171 GTVTVTSLWILVPSSQVDGKNVTCKVEHESFEKPQLLTVNLTVYY---PPEVSISGYDNNWYLGQNEATLTCDARSNPEP 247 (313)
T ss_dssp TCEEEEEEEEECCCGGGTTCEEEEEEECTTSSSCEEEEEECCBCE---EEEEEEECCCSCEETTCCCEEEEEEEEEESCC
T ss_pred cccccceeeeecccccccCeeEEEEEEccCcCccceeeeeccccc---CCccccccccceeecCCCeEEEEEEecCCCCC
Confidence 222 2211 147888999887621 12222221111 25554333 33456678899999999999998
Q ss_pred -ceEEEeCCEEecCCCCCceEEcCCCCceeEEEcCCCCCCCeeEEEEEEcccccceecceEEEEecce
Q psy2441 143 -KISWIREMLPVDTSRNPRYNLLTSGAPGALQITNSIEEDQGKYECVAENEVGTEYSPSTMLYVKGTQ 209 (212)
Q Consensus 143 -~i~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~n~~g~~~~~~~~l~v~~~~ 209 (212)
.+.|++++..+... ....+ .+|.|.+++.+|+|.|.|.|.|..|..... +.|.|+..+
T Consensus 248 ~~v~W~~~~~~l~~~-----~~~~~---~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~-~~l~V~~~P 306 (313)
T 4fqp_A 248 TGYNWSTTMGPLPPF-----AVAQG---AQLLIRPVDKPINTTLICNVTNALGARQAE-LTVQVKEGP 306 (313)
T ss_dssp CEEEEEETTBSCCTT-----EEEET---TEEEECCCSSCCEEEEEEEEECSSCEEEEE-EEEEEECCC
T ss_pred cEEEEEECCEECCCc-----eEEeC---CEEEECcCChhhCEEEEEEEEeCCCcEEEE-EEEEEEeCC
Confidence 69999999877543 12223 689999999999999999999999998777 888887654
No 21
>3qs9_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, hematopoietic cytokine-receptor complex, cell surface, EXTR complex; 7.80A {Homo sapiens}
Probab=99.93 E-value=2e-25 Score=174.38 Aligned_cols=190 Identities=11% Similarity=0.039 Sum_probs=137.6
Q ss_pred ceeeEEEeeccCCCcceecccccCCCCCeEEeCCCccEEeeCCeEEEEcccC-CCCCCcEEEEeCCEEecCCCC------
Q psy2441 3 IGTYIKIKPNLFSPLSVYSADKIPPGFPQITEAPSTKVVEISHTTVLHCSAS-GNPPPKISWIREMLPVDTSRN------ 75 (212)
Q Consensus 3 ~g~Y~C~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~-~~p~~~v~W~k~g~~l~~~~~------ 75 (212)
+|.|+|.|.|..|........+.+..+|.+ .+....+.+|+.+.|.|.+. +.|.+.|+|+|+|..+.....
T Consensus 203 ~G~Y~C~A~N~~G~~~~~~~~l~V~~~p~~--~p~~~~v~~G~~v~L~C~~~~g~p~p~i~W~k~g~~l~~~~~~~~~~~ 280 (527)
T 3qs9_E 203 GTDIRCCARNELGRECTRLFTIDLNQTPQT--TLPQLFLKVGEPLWIRCKAVHVNHGFGLTWELENKALEEGNYFEMSTY 280 (527)
T ss_dssp SSCEEEEEECSSCEEEEECEEEESSSCCCC--SCCEEEECTTSCEEEEEEEEESSSCCCEEEECSSSCCCGGGEEEEEEE
T ss_pred CEEEEEEEEeCCCcccceEEEEEEeccCcc--CCCceEEeCCCeEEEEEEEccCCCCeEEEEEECCEECCCCceeeeeee
Confidence 588999999998876654455555566665 66678899999999999996 899999999999987654310
Q ss_pred --C-------eeEEeec--CCCCeEEEeeeCC---ccceeEEeecCCCCCCCccccCC--cceeEecCCcEEEEEeeeeC
Q psy2441 76 --P-------RYNLLTS--GAPGTYIKIKPNL---FSPLSVYSADKIPPGFPQITEAP--STKVVEISHTTVLHCSASGN 139 (212)
Q Consensus 76 --~-------~~~~~~~--~~~g~~l~i~~~~---~~~~~v~~~~~~~~~~p~~~~~~--~~~~~~~g~~~~l~C~~~~~ 139 (212)
. .+.+... +|.|.|.|.+.+. ...+.|.. +|.+...+ ....+.+|+.+.|.|.+.+.
T Consensus 281 ~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~N~~~~~~~L~V~~-------~p~i~~~~~~~~~~v~~G~~v~L~C~~~g~ 353 (527)
T 3qs9_E 281 STNRTMIRILFAFVSSVARNDTGYYTCSSSKHPSQSALVTIVE-------KGFINATNSSEDYEIDQYEEFCFSVRFKAY 353 (527)
T ss_dssp ETTTEEEEEEEEEESSCCGGGCEEEEEEETTEEEEEEEEEEC---------CEEECCCSCCEECCCTTCCCCEEEEEEEE
T ss_pred ccCcceeeEEEEEEccCCcccCeEEEEEEEeCCCceEEEEEEc-------cCccccccCcccEEEcCCCeEEEEEEEEec
Confidence 0 0222222 4889999988774 22233322 13333332 23567789999999999999
Q ss_pred CCCceEEEeCCEEecCCCCCceEEcCCCCceeEEEcCCCCCCCeeEEEEEEcccccceecceEEEEecc
Q psy2441 140 PPPKISWIREMLPVDTSRNPRYNLLTSGAPGALQITNSIEEDQGKYECVAENEVGTEYSPSTMLYVKGT 208 (212)
Q Consensus 140 p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~n~~g~~~~~~~~l~v~~~ 208 (212)
|.|.+.|++++..+.... ++ ...+ ..|.|.++..+|+|.|+|.|.|..|..... +.|.|+.+
T Consensus 354 P~p~i~W~k~g~~l~~~~--~~-~~~~---~~L~I~~v~~~D~G~YtC~A~N~~g~~~~~-~~L~V~~~ 415 (527)
T 3qs9_E 354 PQIRCTWTFSRKSFPCEQ--KG-LDNG---YSISKFCNHKHQPGEYIFHAENDDAQFTKM-FTLNIRRK 415 (527)
T ss_dssp SCCEEEEEETTEEEECBC--CB-CSSS---SEEEEECCCTTCCSCEEEEEEETTEEEEEE-EEEC--CC
T ss_pred CCCEEEEEECCEECcCCc--cc-ccCC---cEEEEecCCcccCEEEEEEEEeCCCcEEEE-EEEEEecC
Confidence 999999999999987642 21 1122 689999999999999999999999988776 77777654
No 22
>1ry7_B FGFR-3, fibroblast growth factor receptor 3; FGF-FGFR complex, beta trefoil, IG domain, growth factor/growth factor receptor complex; 3.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.93 E-value=3.6e-25 Score=163.81 Aligned_cols=171 Identities=23% Similarity=0.443 Sum_probs=121.3
Q ss_pred ccEEeeCCeEEEEcccCCCCCCcEEEEeCCEEecCCC----------CCeeEEeec--CCCCeEEEeeeCCc------cc
Q psy2441 38 TKVVEISHTTVLHCSASGNPPPKISWIREMLPVDTSR----------NPRYNLLTS--GAPGTYIKIKPNLF------SP 99 (212)
Q Consensus 38 ~~~v~~g~~v~l~C~~~~~p~~~v~W~k~g~~l~~~~----------~~~~~~~~~--~~~g~~l~i~~~~~------~~ 99 (212)
...+.+|+.+.|.|.+.+.|.+.+.|+|+|..+.... ...+.+... .|.|.|.|...+.. ..
T Consensus 132 ~~~v~~g~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~ 211 (334)
T 1ry7_B 132 LLAVPAANTVRFRCPAAGNPTPSISWLKNGREFRGEHRIGGIKLRHQQWSLVMESVVPSDRGNYTCVVENKFGSIRQTYT 211 (334)
T ss_dssp EEEEETTCCEEEECCCCCSSCCEEECCBTTBCCCTTSSTTCCCCCTTTTEEEECSCCGGGCCCEEEEEEETTEEEEEEEE
T ss_pred eEEecCCCcEEEEEEccCCCCCeEEEEECCEECcccccccceecccceEEEEECCCCcccCEEEEEEEEeCCCCEEEEEE
Confidence 3578899999999999999999999999998876431 113334332 47889999877622 22
Q ss_pred eeEEeecCCCCCCCcccc-CCcceeEecCCcEEEEEeeeeCCCCceEEEe----CCEEecCCCCCceEEcCC-------C
Q psy2441 100 LSVYSADKIPPGFPQITE-APSTKVVEISHTTVLHCSASGNPPPKISWIR----EMLPVDTSRNPRYNLLTS-------G 167 (212)
Q Consensus 100 ~~v~~~~~~~~~~p~~~~-~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~----~~~~~~~~~~~~~~~~~~-------~ 167 (212)
+.|... ++.+|.+.. .+....+.+|+.+.|.|.+.+.|.|.+.|++ ++..+.......+..... .
T Consensus 212 l~V~~~---~~~~p~~~~~~~~~~~~~~G~~v~l~C~~~g~p~p~v~W~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 288 (334)
T 1ry7_B 212 LDVLER---SPHRPILQAGLPANQTAVLGSDVEFHCKVYSDAQPHIQWLKHVEVNGSKVGPDGTPYVTVLKTAGANTTDK 288 (334)
T ss_dssp EEEECC---CCSSCBCCTTCSCCEEEESSCCEEECCCCBCSSCEEEEEEECCCGGGCSBCTTSSBCCCCCCCSSCSCSCT
T ss_pred EEEecC---CCCCCceEecCCCceEEeCCCCEEEEEEEecCCCCeEEEEECCcCCCccccCCCCeeEEEeecCccccccc
Confidence 333321 112243333 3455778899999999999999999999999 666554431222222211 1
Q ss_pred CceeEEEcCCCCCCCeeEEEEEEcccccceecceEEEEecceecC
Q psy2441 168 APGALQITNSIEEDQGKYECVAENEVGTEYSPSTMLYVKGTQVDI 212 (212)
Q Consensus 168 ~~~~l~i~~~~~~d~g~y~C~a~n~~g~~~~~~~~l~v~~~~~p~ 212 (212)
....|.|.++..+|+|.|+|.|.|..|..... +.|.|...+.|+
T Consensus 289 ~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~-~~l~V~~~~~~~ 332 (334)
T 1ry7_B 289 ELEVLSLHNVTFEDAGEYTCLAGNSIGFSHHS-AWLVVLPAEEEL 332 (334)
T ss_dssp TCCCEEECSCCTTSCSEEEEEEEESSCCEEEE-EEEEEECSCCC-
T ss_pred cccEEEEccCCHHHCEEEEEEEeCCCCeEEEE-EEEEEEECCCCc
Confidence 12489999999999999999999999999887 899998877664
No 23
>2y23_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin- like; 2.50A {Homo sapiens}
Probab=99.93 E-value=1.4e-25 Score=164.39 Aligned_cols=194 Identities=16% Similarity=0.165 Sum_probs=132.5
Q ss_pred ceeeEEEeeccCCCcceecccccCCC------------CCeEEeCCC-ccEEeeCCeEEEEcccC-CCCCCcEEEEeCCE
Q psy2441 3 IGTYIKIKPNLFSPLSVYSADKIPPG------------FPQITEAPS-TKVVEISHTTVLHCSAS-GNPPPKISWIREML 68 (212)
Q Consensus 3 ~g~Y~C~~~~~~~~~~~~~~~~~~~~------------~p~~~~~~~-~~~v~~g~~v~l~C~~~-~~p~~~v~W~k~g~ 68 (212)
+|.|+|.+.|..+.... ..+.+.. +|.+...+. ...+.+|+.+.|.|.+. +.|.+.+.|+|+|.
T Consensus 70 ~G~Y~C~~~n~~g~~~s--~~l~v~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~~~ 147 (312)
T 2y23_A 70 LGIYSCDVTDTDGIASS--YLIDEEELKRLLALSHEHKFPTVPVKSELAVEILEKGQVRFWMQAEKLSGNAKVNYIFNEK 147 (312)
T ss_dssp CEEEEEEESSSCCCCEE--EEECHHHHHHHHHHHHHHHSCBCCEEEEEEEEECSSSCEEEEEEESCCCSSCEEEEEETTE
T ss_pred CEEEEEEEEeCCCcEEE--EEEEEeeeeeeecccccCCCCccccccCCceEEeeCCCEEEEEEEEeCCCCCEEEEEECCE
Confidence 58999999998875432 2222211 555554443 77889999999999998 88999999999999
Q ss_pred EecCCCCCeeEEee-------------c--CCCCeEEEeeeCCccce--eEEeecC----------------CCCCCCcc
Q psy2441 69 PVDTSRNPRYNLLT-------------S--GAPGTYIKIKPNLFSPL--SVYSADK----------------IPPGFPQI 115 (212)
Q Consensus 69 ~l~~~~~~~~~~~~-------------~--~~~g~~l~i~~~~~~~~--~v~~~~~----------------~~~~~p~~ 115 (212)
++... .++.+.. . +|.|.|.|......... .+..... ....+|.+
T Consensus 148 ~i~~~--~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 225 (312)
T 2y23_A 148 EIFEG--PKYKMHIDRNTGIIEMFMEKLQDEDEGTYTFQLQDGKATNHSTVVLVGDVFKKLQKEAEFQRQEWIRKQGPHF 225 (312)
T ss_dssp EECSS--SSCEEEEETTTTEEEEEESCCCGGGCEEEEEEEESSSCEEEEEEEECTHHHHHHHHHHHHHHHHHHHHHSSEE
T ss_pred ECeeC--CcEEEEEccCCCEEEEEEccCCcccCEeEEEEEEeCCceEEEEEEEcchhhhhhcccccccccchhhccCCce
Confidence 98775 3333222 1 36777777665422221 1111000 00001332
Q ss_pred ccCCcceeEecCCcEEEEEeeeeCCCC-ceEEEeCCEEecCCCCCceEEcCCCCceeEEEcCCCCCCCeeEEEEEEcccc
Q psy2441 116 TEAPSTKVVEISHTTVLHCSASGNPPP-KISWIREMLPVDTSRNPRYNLLTSGAPGALQITNSIEEDQGKYECVAENEVG 194 (212)
Q Consensus 116 ~~~~~~~~~~~g~~~~l~C~~~~~p~~-~i~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~n~~g 194 (212)
... ....+.+|+.+.|.|.+.+.|.| .+.|++++..+... .++....+ ...|.|.++..+|+|.|.|.|.|..|
T Consensus 226 ~~~-~~~~v~~G~~~~l~C~~~~~p~~~~v~W~~~g~~~~~~--~~~~~~~~--~~~L~I~~v~~~d~G~Y~C~a~N~~G 300 (312)
T 2y23_A 226 VEY-LSWEVTGECNVLLKCKVANIKKETHIVWYKDEREISVD--EKHDFKDG--ICTLLITEFSKKDAGIYEVILKDDRG 300 (312)
T ss_dssp EEE-EEEEEETTTEEEEEEEEESCCSSCEEEEEETTEEEEEE--CCC----C--EEEEEECSCSGGGCEEEEEEEESTTC
T ss_pred eec-ceEEEeCCCEEEEEEEEcCCCCCCEEEEeeCCEECCCC--CcEEEECC--EEEEEECcCCHHHCEEEEEEEEcCCC
Confidence 221 12568899999999999999988 99999999988754 33333322 37999999999999999999999999
Q ss_pred cceecceEEEEe
Q psy2441 195 TEYSPSTMLYVK 206 (212)
Q Consensus 195 ~~~~~~~~l~v~ 206 (212)
..... +.|.++
T Consensus 301 ~~~~~-~~l~i~ 311 (312)
T 2y23_A 301 KDKSR-LKLVDE 311 (312)
T ss_dssp CEEEE-EEECSC
T ss_pred ceeee-eEEEec
Confidence 99877 777665
No 24
>3lcy_A Titin; A-BAND, IG tandem domains, ATP-binding, calmodulin-BI cardiomyopathy, disease mutation, disulfide bond, immunoglo domain, isopeptide bond; 2.50A {Homo sapiens}
Probab=99.93 E-value=1.3e-24 Score=149.01 Aligned_cols=169 Identities=21% Similarity=0.302 Sum_probs=128.9
Q ss_pred CCCCeEEeCCCccEEeeCCeEEEEcccCCCCCCcEEEEeCCEEecCCCCCe-----------eEEeec--CCCCeEEEee
Q psy2441 27 PGFPQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREMLPVDTSRNPR-----------YNLLTS--GAPGTYIKIK 93 (212)
Q Consensus 27 ~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~k~g~~l~~~~~~~-----------~~~~~~--~~~g~~l~i~ 93 (212)
..+|.+...+....+.+|+.+.|.|.+.+.|.+.+.|+|++..+... .+ +.+... +|.|.|.|..
T Consensus 5 ~~~P~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~--~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~ 82 (197)
T 3lcy_A 5 GEAPGIRKEMKDVTTKLGEAAQLSCQIVGRPLPDIKWYRFGKELIQS--RKYKMSSDGRTHTLTVMTEEQEDEGVYTCIA 82 (197)
T ss_dssp CEEEEEEECCCCEEEETTSEEEEEEEEEEESCCEEEEEETTEEECCC--SSEEEEESSSEEEEEEECCSGGGCEEEEEEE
T ss_pred CCCCcccccCCceEEeCCCcEEEEEEEecCCCCEEEEEECCEECCCC--ccEEEEeCCCEEEEEEecCCccCCEEEEEEE
Confidence 56788889999999999999999999988899999999999988654 32 222222 3788888877
Q ss_pred eC------CccceeEEeecCCCCCCCccc---cCCcceeEecCCcEEEEEeeeeCCCCceEEEeCCEEecCCCCCceEEc
Q psy2441 94 PN------LFSPLSVYSADKIPPGFPQIT---EAPSTKVVEISHTTVLHCSASGNPPPKISWIREMLPVDTSRNPRYNLL 164 (212)
Q Consensus 94 ~~------~~~~~~v~~~~~~~~~~p~~~---~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~ 164 (212)
.. ....+.|... |.+. ..+....+..|+.+.|.|.+.+.|.|.+.|++++..+... .++...
T Consensus 83 ~n~~~~~~~~~~l~v~~~-------p~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~--~~~~~~ 153 (197)
T 3lcy_A 83 TNEVGEVETSSKLLLQAT-------PQFHPGYPLKEKYYGAVGSTLRLHVMYIGRPVPAMTWFHGQKLLQNS--ENITIE 153 (197)
T ss_dssp ECSSCEEEEEEEEEEEEE-------EEECTTSCCCSEEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCC--SSEEEE
T ss_pred ECCCCceeEEEEEEEEcC-------CCCCCCccCCcceeecCCCeEEEEEEEeeeeCCeeEEeECCEECCCC--CceEEE
Confidence 65 2223333332 2221 1223456788999999999999999999999999988764 455554
Q ss_pred CCCCceeEEEcCCCC-CCCeeEEEEEEcccccceecceEEEEec
Q psy2441 165 TSGAPGALQITNSIE-EDQGKYECVAENEVGTEYSPSTMLYVKG 207 (212)
Q Consensus 165 ~~~~~~~l~i~~~~~-~d~g~y~C~a~n~~g~~~~~~~~l~v~~ 207 (212)
.......|.|.++.. +|.|.|+|.|.|..|..... +.|.|.+
T Consensus 154 ~~~~~~~L~i~~~~~~~d~G~Y~C~a~n~~g~~~~~-~~l~V~~ 196 (197)
T 3lcy_A 154 NTEHYTHLVMKNVQRKTHAGKYKVQLSNVFGTVDAI-LDVEIQD 196 (197)
T ss_dssp ECSSEEEEEESSCCHHHHCEEEEEEEECSSCEEEEE-EEEEEEC
T ss_pred EcCCEEEEEEccccchhhCceEEEEEEcCcCceEEE-EEEEEec
Confidence 444447899999995 89999999999999998777 8887765
No 25
>2v5t_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, membrane, glycoprote adhesion, transmembrane; HET: NAG; 2.00A {Homo sapiens}
Probab=99.93 E-value=1.3e-24 Score=148.18 Aligned_cols=168 Identities=26% Similarity=0.406 Sum_probs=122.5
Q ss_pred CCeEEeCCCccEEeeCCeEEEEcccCCCCCCcEEEEeCCEEecCCCCCee--------EEeec--CCCCeEEEeeeCCc-
Q psy2441 29 FPQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREMLPVDTSRNPRY--------NLLTS--GAPGTYIKIKPNLF- 97 (212)
Q Consensus 29 ~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~k~g~~l~~~~~~~~--------~~~~~--~~~g~~l~i~~~~~- 97 (212)
+|.|...+.+..+.+|+.+.|.|.+.+.|.+.+.|+|++..+......++ .+... .|.|.|.|......
T Consensus 2 ~~~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~ 81 (189)
T 2v5t_A 2 MLTFREVVSPQEFKQGEDAEVVCRVSSSPAPAVSWLYHNEEVTTISDNRFAMLANNNLQILNINKSDEGIYRCEGRVEAR 81 (189)
T ss_dssp CCEEEECCSSEEEETTSCEEECCEEECSSCCEEEEEC-----CBCCCTTEEECTTSCEEETTCCGGGCEEEEEEEEETTT
T ss_pred CceeeccCCCEEEeCCCcEEEEEEEcCCCCCEEEEEECCccceeccCCeEEEecCCCEEEeeCCHhHCcEEEEEEEEcCC
Confidence 68888899999999999999999999889999999999987764322333 33322 38889999866521
Q ss_pred -------cceeEEeecCCCCCCCccccCCc--ceeEecCCcEEEEEeeeeCCCCceEEEeCCEEecCCCCCceEEcCCCC
Q psy2441 98 -------SPLSVYSADKIPPGFPQITEAPS--TKVVEISHTTVLHCSASGNPPPKISWIREMLPVDTSRNPRYNLLTSGA 168 (212)
Q Consensus 98 -------~~~~v~~~~~~~~~~p~~~~~~~--~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~ 168 (212)
..+.+... |.+..... ...+.+|+.+.|.|.+.+.|.+.+.|++++..+... .++....+.
T Consensus 82 ~~~~~~~~~l~v~~~-------p~~~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~v~W~~~g~~~~~~--~~~~~~~~~- 151 (189)
T 2v5t_A 82 GEIDFRDIIVIVNVP-------PAISMPQKSFNATAERGEEMTFSCRASGSPEPAISWFRNGKLIEEN--EKYILKGSN- 151 (189)
T ss_dssp TEEEEEEEEEEEEEE-------EEEECSCCEEEEETTSCCCEEEECEEEEESCCEEEEEETTEECCCS--SSEEEETTT-
T ss_pred CceEEEEEEEEecCC-------CCcccccccccccccCCCcEEEEEEEccCCCCeEEEEECCEECcCC--CcEEEecCC-
Confidence 11222221 33333332 345677999999999999999999999999988764 444444333
Q ss_pred ceeEEEcCCCCCCCeeEEEEEEcccccceecceEEEEecc
Q psy2441 169 PGALQITNSIEEDQGKYECVAENEVGTEYSPSTMLYVKGT 208 (212)
Q Consensus 169 ~~~l~i~~~~~~d~g~y~C~a~n~~g~~~~~~~~l~v~~~ 208 (212)
..|.|.++..+|.|.|.|.|.|..|..... +.|.|.++
T Consensus 152 -~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~-~~l~V~vq 189 (189)
T 2v5t_A 152 -TELTVRNIINSDGGPYVCRATNKAGEDEKQ-AFLQVFVQ 189 (189)
T ss_dssp -TEEEECSCCGGGCEEEEEEEEETTEEEEEE-EEEEEECC
T ss_pred -CEEEEcCCChhhCeeEEEEEEeCCCceeEE-EEEEEEeC
Confidence 689999999999999999999999998877 88887653
No 26
>2wv3_A Neuroplastin; igcam, membrane, glycoprotein, cell membrane, cell adhesion, transmembrane, disulfide bond, alternative splicing; HET: NAG; 1.95A {Rattus norvegicus}
Probab=99.93 E-value=4.3e-24 Score=145.93 Aligned_cols=175 Identities=21% Similarity=0.346 Sum_probs=128.5
Q ss_pred CCCeEEeCCCccEEee-CCeEEEEcccCCCCC--CcEEEEeCCEEecCCC----CCeeEEeec--CCCCeEEEeeeCC-c
Q psy2441 28 GFPQITEAPSTKVVEI-SHTTVLHCSASGNPP--PKISWIREMLPVDTSR----NPRYNLLTS--GAPGTYIKIKPNL-F 97 (212)
Q Consensus 28 ~~p~~~~~~~~~~v~~-g~~v~l~C~~~~~p~--~~v~W~k~g~~l~~~~----~~~~~~~~~--~~~g~~l~i~~~~-~ 97 (212)
.+|.+... ....+.+ |+.+.|.|.+.+.|. +.+.|+|+|..+.... ...+.+... +|.|.|.|..... .
T Consensus 2 ~~P~i~~~-~~~~v~~~G~~v~l~C~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~ 80 (190)
T 2wv3_A 2 NEPRIVTS-EEVIIRDSLLPVTLQCNLTSSSHTLMYSYWTKNGVELTATRKNASNMEYRINKPRAEDSGEYHCVYHFVSA 80 (190)
T ss_dssp -CCEEEEC-CCEECCCSSSCEEEEEEEEECSSCEEEEEEEETTEECTTCCBCCSEEEEEESSCCGGGCEEEEEEEEETTE
T ss_pred CCCccccc-ceEEEccCCceEEEEEEeccCCCCceEEEEEECCEECcccceEeccEEEEEecCCcccCEEEEEEEEeCCc
Confidence 46777664 4455666 999999999988776 7899999999887642 112333332 4899999987653 1
Q ss_pred cceeEEeecCCCCCCCccccCCcceeEecCCcEEEEEeeeeCCCCceEEEe--CCEEecCC-CCCceEEcCCCCceeEEE
Q psy2441 98 SPLSVYSADKIPPGFPQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIR--EMLPVDTS-RNPRYNLLTSGAPGALQI 174 (212)
Q Consensus 98 ~~~~v~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~--~~~~~~~~-~~~~~~~~~~~~~~~l~i 174 (212)
....+...... +|.+...+....+.+|+.+.|.|.+.+.|.|.+.|++ ++..+... ...++....++....|.|
T Consensus 81 ~~~~~~l~V~~---~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~g~~~~~~~~~~~~~~~~~~~~~~L~i 157 (190)
T 2wv3_A 81 PKANATIEVKA---APDITGHKRSENKNEGQDAMMYCKSVGYPHPEWMWRKKENGVFEEISNSSGRFFIINKENYTELNI 157 (190)
T ss_dssp EEEEEEEEEEC---CCEEEEECSEEEEETTSCEEEEEEEECSSCCEEEEEEEETTEEEECCCTTSCEEEEECSSEEEEEE
T ss_pred ccccEEEEEec---CCcccccCCcceeeCCCcEEEEEEeCccCCCceEEEEcCCCceeeeecCCCeEEEecCCCeeEEEE
Confidence 11111111111 2666666667778999999999999999999999999 77776543 245666655554568999
Q ss_pred cCCC-CCCCeeEEEEEEcccccceecceEEEEec
Q psy2441 175 TNSI-EEDQGKYECVAENEVGTEYSPSTMLYVKG 207 (212)
Q Consensus 175 ~~~~-~~d~g~y~C~a~n~~g~~~~~~~~l~v~~ 207 (212)
.++. .+|.|.|.|.|.|..|..... +.|.|++
T Consensus 158 ~~~~~~~d~G~Y~C~a~N~~g~~~~~-~~l~V~V 190 (190)
T 2wv3_A 158 VNLQITEDPGEYECNATNSIGSASVS-TVLRVRV 190 (190)
T ss_dssp CSCCTTTSCEEEEEEEECSSCEEEEE-EEEEEEC
T ss_pred EeccccCCCEEEEEEEEecCCcceeE-EEEEEEC
Confidence 9999 799999999999999998877 8888764
No 27
>2yd9_A Receptor-type tyrosine-protein phosphatase S; hydrolase; HET: NAG B3P; 2.60A {Homo sapiens}
Probab=99.93 E-value=3.8e-24 Score=156.44 Aligned_cols=178 Identities=38% Similarity=0.688 Sum_probs=131.1
Q ss_pred CCCCeEEeCCCccEEeeCCeEEEEcccCCCCCCcEEEEeCCEEecCCC-------C---CeeEEeec---CCCCeEEEee
Q psy2441 27 PGFPQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREMLPVDTSR-------N---PRYNLLTS---GAPGTYIKIK 93 (212)
Q Consensus 27 ~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~k~g~~l~~~~-------~---~~~~~~~~---~~~g~~l~i~ 93 (212)
..+|.|...|.+..+.+|+.+.|.|.+.+.|.+.|.|+|+|..+.... . ..+.+... +|.|.|.|..
T Consensus 4 ~~~P~~~~~p~~~~v~~G~~v~l~C~~~g~p~~~i~W~k~g~~i~~~~~~~~~~~~~~~~~L~i~~~~~~~D~G~Y~C~a 83 (304)
T 2yd9_A 4 EEPPRFIKEPKDQIGVSGGVASFVCQATGDPKPRVTWNKKGKKVNSQRFETIEFDESAGAVLRIQPLRTPRDENVYECVA 83 (304)
T ss_dssp CCCCEEEECCCCEEEETTSCEEEEEEEECSSCCEEEEC-------CTTEEEEEETTTTEEEEEECSCCTTTTCSEEEEEE
T ss_pred ccCCeeeecCCceEecCCCeEEEEEEEEEeCCCeEEEEECCEECCCCceEEEEecCCCceEEEEecccccCCCeEEEEEE
Confidence 478999999999999999999999999999999999999998875431 0 12333221 4789999987
Q ss_pred eC------CccceeEEeecCCCCCCCccccCCcceeEecCCcEEEEEeeeeCCCCceEEEeCCEEecCC-CCCceEEcCC
Q psy2441 94 PN------LFSPLSVYSADKIPPGFPQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREMLPVDTS-RNPRYNLLTS 166 (212)
Q Consensus 94 ~~------~~~~~~v~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~-~~~~~~~~~~ 166 (212)
.. ....+.|......++.+|.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+... ...++....+
T Consensus 84 ~n~~g~~~~~~~l~V~~~~~~p~~~p~i~~~~~~~~v~~g~~v~l~C~~~g~p~~~v~W~k~~~~~~~~~~~~~~~~~~~ 163 (304)
T 2yd9_A 84 QNSVGEITVHAKLTVLREDQLPSGFPNIDMGPQLKVVERTRTATMLCAASGNPDPEITWFKDFLPVDPSASNGRIKQLRS 163 (304)
T ss_dssp ECSSCEECCEEEEEEECGGGCCTTCCEEEECCCCEEEETTSCEEECCEEECSSCCEEEEEETTEECCGGGGTTSEEECTT
T ss_pred ECCCCeEEEEEEEEEeccccCCCCCCeeecCCccEEEeCCCeEEEEEECccCCCCeEEEEECCEECcCCCCcceEEeCCC
Confidence 66 3345555554444445577777777778899999999999999999999999999888654 2234444444
Q ss_pred CCceeEEEcCCCCCCCeeEEEEEEcccccceecceEEEEec
Q psy2441 167 GAPGALQITNSIEEDQGKYECVAENEVGTEYSPSTMLYVKG 207 (212)
Q Consensus 167 ~~~~~l~i~~~~~~d~g~y~C~a~n~~g~~~~~~~~l~v~~ 207 (212)
..|.|.++..+|.|.|.|.|.|..|........+.|.+
T Consensus 164 ---~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~l~v~~ 201 (304)
T 2yd9_A 164 ---GALQIESSEETDQGKYECVATNSAGVRYSSPANLYVRV 201 (304)
T ss_dssp ---SCEEECSCCGGGCEEEEEEEEETTEEEECCCEEEEEEC
T ss_pred ---eEEEEccCCcccCEEEEEEEEeCCCCEEeccEEEEEEe
Confidence 68999999999999999999999987765435666654
No 28
>3laf_A Deleted in colorectal cancer; netrin-1 receptor, immunoglobulin superfamily, horseshoe, AP; HET: NAG BMA; 2.40A {Rattus norvegicus}
Probab=99.93 E-value=1.8e-24 Score=163.82 Aligned_cols=201 Identities=21% Similarity=0.325 Sum_probs=144.7
Q ss_pred ceeeEEEeeccCCCc-ceecccccCCCCCeEEeCCCccEEeeCCeEEEEcccCCCCCCcEEEEeCCEEecCCC-------
Q psy2441 3 IGTYIKIKPNLFSPL-SVYSADKIPPGFPQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREMLPVDTSR------- 74 (212)
Q Consensus 3 ~g~Y~C~~~~~~~~~-~~~~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~k~g~~l~~~~------- 74 (212)
+|.|+|.+.+..+.. ......+.+..+|.+...+....+.+|+.+.|.|.+.+.|.+.+.|+|++..+....
T Consensus 94 ~G~Y~C~~~~~~~~~~~s~~~~l~v~~p~~~~~~~~~~~~~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~ 173 (403)
T 3laf_A 94 EGLYQCEASLGDSGSIISRTAKVMVAGPLRFLSQTESITAFMGDTVLLKCEVIGDPMPTIHWQKNQQDLNPIPGDSRVVV 173 (403)
T ss_dssp CEEEEEEEECGGGCEEECCCEEEEECCCCEECSCCCCEEEETTSCEEECCCEECSSCCEEEEEESSSBCCCCTTCCSEEE
T ss_pred ceEEEEEEEeCCCccEEEEEEEEEecCCCccccCCCcEEEEcCCeEEEEEEEcccCCCeEEEEECCEeccccCCceEEEE
Confidence 599999999654432 223344445678888888888999999999999999999999999999998774321
Q ss_pred --CCeeEEeec--CCCCeEEEeeeCC-------ccceeEEeecCCCCCCCccccCCcceeEecCCcEEEEEeeeeCCCCc
Q psy2441 75 --NPRYNLLTS--GAPGTYIKIKPNL-------FSPLSVYSADKIPPGFPQITEAPSTKVVEISHTTVLHCSASGNPPPK 143 (212)
Q Consensus 75 --~~~~~~~~~--~~~g~~l~i~~~~-------~~~~~v~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~ 143 (212)
...+.+... +|.|.|.|..... ...+.+....... ..+.+...+....+.+|+.+.|.|.+.+.|.+.
T Consensus 174 ~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~~l~v~~~p~~~-~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~ 252 (403)
T 3laf_A 174 LPSGALQISRLQPGDSGVYRCSARNPASTRTGNEAEVRILSDPGLH-RQLYFLQRPSNVIAIEGKDAVLECCVSGYPPPS 252 (403)
T ss_dssp CTTSCEEECSCCGGGCEEEEEEEECSSCCCBCCCEEEEEECCCCCC-EEEEEEECCCCEEEETTSCEEECCEEEEESCCE
T ss_pred cCCceEEEcccccccCEEEEEEEEcCCCceeccceeEEEecCCCcc-cCceEecCCCceEecCCCcEEEEEEcCCCCCCe
Confidence 123333332 3788999987661 2233333221110 011233455567788999999999999999999
Q ss_pred eEEEeCCEEecCCCCCceEEcCCCCceeEEEcCCCCCCCeeEEEEEEcccccceecceEEEEecce
Q psy2441 144 ISWIREMLPVDTSRNPRYNLLTSGAPGALQITNSIEEDQGKYECVAENEVGTEYSPSTMLYVKGTQ 209 (212)
Q Consensus 144 i~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~n~~g~~~~~~~~l~v~~~~ 209 (212)
+.|++++..+... ..++....+ ..|.|.++..+|.|.|.|.|.|..|..... +.|.|..++
T Consensus 253 ~~W~~~~~~~~~~-~~~~~~~~~---~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~-~~l~V~~~p 313 (403)
T 3laf_A 253 FTWLRGEEVIQLR-SKKYSLLGG---SNLLISNVTDDDSGTYTCVVTYKNENISAS-AELTVLVPP 313 (403)
T ss_dssp EEEEETTEECCCS-SSSEEEETT---TEEEECSCCGGGCEEEEEEEEETTEEEEEE-EEEEEEEEE
T ss_pred EEEEECCeeccCC-CceEEECCc---cEEEEeCCCHHHCEEEEEEEEcCCCceEEE-EEEEEECCC
Confidence 9999999887754 334444444 689999999999999999999999887766 777776543
No 29
>1cs6_A Axonin-1; neural cell adhesion, cell adhesion; 1.80A {Gallus gallus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4 PDB: 2om5_A
Probab=99.93 E-value=1e-24 Score=164.15 Aligned_cols=190 Identities=25% Similarity=0.428 Sum_probs=141.5
Q ss_pred ceeeEEEeeccCCCccee----ccccc------CCCCCeEEe-CCCccEEeeCCeEEEEcccCCCCCCcEEEEeCCEEec
Q psy2441 3 IGTYIKIKPNLFSPLSVY----SADKI------PPGFPQITE-APSTKVVEISHTTVLHCSASGNPPPKISWIREMLPVD 71 (212)
Q Consensus 3 ~g~Y~C~~~~~~~~~~~~----~~~~~------~~~~p~~~~-~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~k~g~~l~ 71 (212)
+|.|+|.+.|..+..... ...+. ...+|.+.. .+....+.+|+.+.|.|.+.+.|.+.+.|+|++..+.
T Consensus 170 ~G~Y~C~~~n~~g~~~~~~~s~~~~l~v~~~~~~~~~P~~~~~~~~~~~~~~G~~v~l~C~~~g~p~~~i~W~~~~~~~~ 249 (382)
T 1cs6_A 170 LGNYSCFATSHIDFITKSVFSKFSQLSLAAEDARQYAPSIKAKFPADTYALTGQMVTLECFAFGNPVPQIKWRKLDGSQT 249 (382)
T ss_dssp CEEEEEEEEEEETTEEEEEECCCEEEEEESCCCCCEEEEEEECCCSEEEEETTCCEEEECEEEEESCCEEEEEECCSCCS
T ss_pred CeeEEEEEEEccccccceeEccceeeccchhhcccCCCceeccCCCceEEeCCCeEEEEEEEccCCCCEEEEEECCcccc
Confidence 599999999977432211 11111 133566654 3567889999999999999999999999999887654
Q ss_pred CC---CCCeeEEeec--CCCCeEEEeeeC------CccceeEEeecCCCCCCCccccCCcceeEecCCcEEEEEeeeeCC
Q psy2441 72 TS---RNPRYNLLTS--GAPGTYIKIKPN------LFSPLSVYSADKIPPGFPQITEAPSTKVVEISHTTVLHCSASGNP 140 (212)
Q Consensus 72 ~~---~~~~~~~~~~--~~~g~~l~i~~~------~~~~~~v~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p 140 (212)
.. ....+.+... +|.|.|.|...+ ....+.|... |.+...+....+.+|+.+.|.|.+.+.|
T Consensus 250 ~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~-------p~~~~~~~~~~~~~g~~~~l~C~~~g~p 322 (382)
T 1cs6_A 250 SKWLSSEPLLHIQNVDFEDEGTYECEAENIKGRDTYQGRIIIHAQ-------PDWLDVITDTEADIGSDLRWSCVASGKP 322 (382)
T ss_dssp CCCSBSSSEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEEE-------EEEEECCCCEEEETTCCEEEECEEEEES
T ss_pred cEEecCCcEEEEccCChhhCEEEEEEEEcCCCeEEEEEEEEEecC-------CCcccCCCccEEcCCCeEEEEEEeeeec
Confidence 31 1244455443 488999998866 2233444332 5666666677889999999999999999
Q ss_pred CCceEEEeCCEEecCCCCCceEEcCCCCceeEEEcCCCCCCCeeEEEEEEcccccceecceEEEEe
Q psy2441 141 PPKISWIREMLPVDTSRNPRYNLLTSGAPGALQITNSIEEDQGKYECVAENEVGTEYSPSTMLYVK 206 (212)
Q Consensus 141 ~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~n~~g~~~~~~~~l~v~ 206 (212)
.|.+.|++++..+... .++... + ..|.|.++..+|+|.|.|.|.|..|..... +.|.|+
T Consensus 323 ~p~v~W~~~g~~~~~~--~~~~~~-~---~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~-~~l~V~ 381 (382)
T 1cs6_A 323 RPAVRWLRDGQPLASQ--NRIEVS-G---GELRFSKLVLEDSGMYQCVAENKHGTVYAS-AELTVQ 381 (382)
T ss_dssp CCEEEEEETTEECCCC--SSEEEE-T---TEEEESSCCGGGCEEEEEEEEETTEEEEEE-EEEEEE
T ss_pred CCEEEEEECCEECCCC--ceEEEE-C---CEEEECcCCcccCEEEEEEEEeCCCeEEEE-EEEEEe
Confidence 9999999999988764 455443 3 589999999999999999999999999877 888775
No 30
>1bih_A Hemolin; insect immunity, LPS-binding, homophilic adhesion; 3.10A {Hyalophora cecropia} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.93 E-value=3.8e-24 Score=161.63 Aligned_cols=184 Identities=23% Similarity=0.355 Sum_probs=137.5
Q ss_pred eeEEEeeccCCCcceeccc--ccC----------CCCCeEEeCCCccEEeeCCeEEEEcccCCCCCCcEEEEeCCEEecC
Q psy2441 5 TYIKIKPNLFSPLSVYSAD--KIP----------PGFPQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREMLPVDT 72 (212)
Q Consensus 5 ~Y~C~~~~~~~~~~~~~~~--~~~----------~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~k~g~~l~~ 72 (212)
.|+|.+.|..+........ +.. ..+|.+ .+....+.+|+.+.|.|.+.+.|.+.+.|+|+|..+..
T Consensus 178 ~Y~C~a~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~--~~~~~~~~~G~~v~l~C~~~g~p~~~i~W~~~g~~~~~ 255 (395)
T 1bih_A 178 KYVCTAKNAAVDEEVVLVEYEIKGVTKDNSGYKGEPVPQY--VSKDMMAKAGDVTMIYCMYGSNPMGYPNYFKNGKDVNG 255 (395)
T ss_dssp EEEEEEECTTCSSCEEEEEEEECCCBCCSSCCCCCCEEEE--ECCSEEEETTSCEEEEEEEECSSCCCCEEEETTEECCC
T ss_pred EEEEEEEecccceEEEeeeEEecccccccccccCCcCcee--cCCceEEECCCcEEEEEEeccCCCCeEEEEECCEEcCC
Confidence 9999999988874332111 111 123333 45677899999999999999999999999999998865
Q ss_pred CCCC-----------eeEEeec--CCCCeEEEeeeCC-------ccceeEEeecCCCCCCCccccCCcc-eeEecCCcEE
Q psy2441 73 SRNP-----------RYNLLTS--GAPGTYIKIKPNL-------FSPLSVYSADKIPPGFPQITEAPST-KVVEISHTTV 131 (212)
Q Consensus 73 ~~~~-----------~~~~~~~--~~~g~~l~i~~~~-------~~~~~v~~~~~~~~~~p~~~~~~~~-~~~~~g~~~~ 131 (212)
.... .+.+... +|.|.|.|...+. ...+.|... |.+...+.. ..+.+|+.+.
T Consensus 256 ~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~l~V~~~-------P~~~~~~~~~~~~~~g~~~~ 328 (395)
T 1bih_A 256 NPEDRITRHNRTSGKRLLFKTTLPEDEGVYTCEVDNGVGKPQKHSLKLTVVSA-------PKYEQKPEKVIVVKQGQDVT 328 (395)
T ss_dssp CTTSSEESCSSSTTSEEEESSCCGGGCEEEEEEECCSSSSCEEEEEEEEEEEE-------EEEEECCCSEEEECTTSCEE
T ss_pred CCceeEEEEecCCCceEEEccCChhhCEEEEEEEEeCCCCceEEEEEEEEEcC-------CccccCCCcceEecCCCeEE
Confidence 3212 3444333 4788999987762 334444432 666666665 6788999999
Q ss_pred EEEeeeeCCCCceEEEeCCEEecCCCCCceEEcCCCCceeEEEcCCCCCCCeeEEEEEEcccccceecceEEEE
Q psy2441 132 LHCSASGNPPPKISWIREMLPVDTSRNPRYNLLTSGAPGALQITNSIEEDQGKYECVAENEVGTEYSPSTMLYV 205 (212)
Q Consensus 132 l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~n~~g~~~~~~~~l~v 205 (212)
|.|.+.+.|.|.+.|++++..+... ++... + ..|.|.++..+|+|.|.|.|.|..|..... +.|.|
T Consensus 329 l~C~~~g~p~p~v~W~~~g~~~~~~---~~~~~-~---~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~-~~l~V 394 (395)
T 1bih_A 329 IPCKVTGLPAPNVVWSHNAKPLSGG---RATVT-D---SGLVIKGVKNGDKGYYGCRATNEHGDKYFE-TLVQV 394 (395)
T ss_dssp EECEEEEESCCCCEEEETTEECCSS---SEEEE-T---TEEEESSCCSTTCEEEEEEEEETTEEEEEE-EEEEE
T ss_pred EEEEECcccCCeeEEEECCEECCCC---ceEEE-C---CEEEEeeCCcccCEEEEEEEEccCCCceEE-EEEEE
Confidence 9999999999999999999987652 44433 2 489999999999999999999999998776 77765
No 31
>2ec8_A MAST/stem cell growth factor receptor; glycoprotein, receptor tyrosine kinase, growth factor cytoki dimerization, transferase; HET: NAG; 3.00A {Homo sapiens} PDB: 2e9w_A*
Probab=99.93 E-value=6.2e-25 Score=171.84 Aligned_cols=198 Identities=14% Similarity=0.133 Sum_probs=140.3
Q ss_pred ce-eeEEEeeccCCCcceecccccC----CCCCeEEeCCCccEEeeCCeEEEEcccCCCCCCc-EEEEeCCEEe--cCCC
Q psy2441 3 IG-TYIKIKPNLFSPLSVYSADKIP----PGFPQITEAPSTKVVEISHTTVLHCSASGNPPPK-ISWIREMLPV--DTSR 74 (212)
Q Consensus 3 ~g-~Y~C~~~~~~~~~~~~~~~~~~----~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~-v~W~k~g~~l--~~~~ 74 (212)
+| .|+|.+.|..+........+.+ ..+|.+...+....+.+|+.+.|.|.+.+.|.+. +.|+|++..+ ....
T Consensus 180 ~G~~Y~C~a~n~~~~~~s~~~~l~V~~~~~~~p~i~~~~~~~~v~~G~~v~L~C~~~g~p~p~~i~W~~~~~~~~~~~~~ 259 (524)
T 2ec8_A 180 HRLCLHCSVDQEGKSVLSEKFILKVRPAFKAVPVVSVSKASYLLREGEEFTVTCTIKDVSSSVYSTWKRENSQTKLQEKY 259 (524)
T ss_dssp TTCEEEEEEC----CCCCCCEECCEECCCCSCCEEECSCSEEEEETTSCEEEEEEEEESSTTCEEEEEETTCSCCCCEEE
T ss_pred CCceEEEEEEECCceEEEEEEEEEEEeCCCCCCcEEecCCcceEEcCCcEEEEEEEecCCCcEEEEEEeCCCCCcccccc
Confidence 47 9999999986654433334443 4789998888888999999999999999988887 9999999773 2110
Q ss_pred ------------CCeeEEeec--CCCCeEEEeeeCCc------cceeEEeecCCCCCCCccccCC---cceeEecCCcEE
Q psy2441 75 ------------NPRYNLLTS--GAPGTYIKIKPNLF------SPLSVYSADKIPPGFPQITEAP---STKVVEISHTTV 131 (212)
Q Consensus 75 ------------~~~~~~~~~--~~~g~~l~i~~~~~------~~~~v~~~~~~~~~~p~~~~~~---~~~~~~~g~~~~ 131 (212)
...+.+... +|.|.|.|...+.. ..+.|.. +|.+...+ ....+.+|+.+.
T Consensus 260 ~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~-------~p~~~~~~~~~~~~~v~~G~~v~ 332 (524)
T 2ec8_A 260 NSWHHGDFNYERQATLTISSARVNDSGVFMCYANNTFGSANVTTTLEVVD-------KGFINIFPMINTTVFVNDGENVD 332 (524)
T ss_dssp EEEECSSSCEEEEEEEEESSCCTTTCEEEEEEEECSSCEEEEEEEEEEES-------SCEEEEEESSCSEEEECTTCCEE
T ss_pred ccccccCCccceEEEEEECCCCHHHCEEEEEEEEecCCceEEEEEEEEec-------cCceEeecCCCceEEEcCCCcEE
Confidence 112222222 48899999887622 2233332 24444433 357788999999
Q ss_pred EEEeeeeCCCCc-eEEEeCCEEecCCCCCceEEcCCC----CceeEEEcCCCCCCCeeEEEEEEcccccceecceEEEEe
Q psy2441 132 LHCSASGNPPPK-ISWIREMLPVDTSRNPRYNLLTSG----APGALQITNSIEEDQGKYECVAENEVGTEYSPSTMLYVK 206 (212)
Q Consensus 132 l~C~~~~~p~~~-i~W~~~~~~~~~~~~~~~~~~~~~----~~~~l~i~~~~~~d~g~y~C~a~n~~g~~~~~~~~l~v~ 206 (212)
|.|.+.+.|.|. +.|++++..+.... .++....++ ....|.|.++..+|+|.|+|.|.|..|..... +.|.|.
T Consensus 333 l~C~~~g~P~p~~v~W~k~g~~~~~~~-~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~-~~l~V~ 410 (524)
T 2ec8_A 333 LIVEYEAFPKPEHQQWIYMNRTFTDKW-EDYPKSENESNIRYVSELHLTRLKGTEGGTYTFLVSNSDVNAAIA-FNVYVN 410 (524)
T ss_dssp EEEEEEEESCCCEEEEESSSCBCSSSB-CCEESCCSSSCCEEEEEEEECSCCGGGCEEEEEEEECSSCEEEEE-EEEEEC
T ss_pred EEEEEeecCCCcEEEEEECCeeccCCc-cceeEEccCCCceeEEEEEEeecCcccCeEEEEEEEecCceEEEE-EEEEEe
Confidence 999999999998 99999998877652 233333322 23689999999999999999999999997766 777776
Q ss_pred cce
Q psy2441 207 GTQ 209 (212)
Q Consensus 207 ~~~ 209 (212)
.++
T Consensus 411 ~~P 413 (524)
T 2ec8_A 411 TKP 413 (524)
T ss_dssp EEE
T ss_pred cCC
Confidence 543
No 32
>3oq3_B IFN-alpha/beta binding protein C12R; mousepox virus, moscow strain, cytokine decoy RE virus/viral protein, type-1 interferon, soluble A/B-IFNR; HET: EPE; 2.10A {Ectromelia virus}
Probab=99.93 E-value=2.7e-24 Score=159.06 Aligned_cols=203 Identities=13% Similarity=0.035 Sum_probs=133.7
Q ss_pred ce-eeEEEeeccCCCcceecccccCCCCCeEEeCCCccEEeeCCeEEEEcccCCCC-CCcEEEEeCCEEecCCC------
Q psy2441 3 IG-TYIKIKPNLFSPLSVYSADKIPPGFPQITEAPSTKVVEISHTTVLHCSASGNP-PPKISWIREMLPVDTSR------ 74 (212)
Q Consensus 3 ~g-~Y~C~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p-~~~v~W~k~g~~l~~~~------ 74 (212)
+| .|+|.+.|..|.........++..+|.+...+....+.+|+.+.|.|.+.+.| .+.+.|+|++..+....
T Consensus 101 ~Gs~Y~C~a~n~~g~~~~~~~~~v~~~~p~~~~~~~~~~~~~G~~v~L~C~~~g~p~~~~i~W~k~~~~l~~~~~~~~~~ 180 (329)
T 3oq3_B 101 SHRRYLCTVTTKNGDCVQGIVRSHIRKPPSCIPETYELGTHDKYGIDLYCGILYAKHYNNITWYKNNQELIIDGTKYSQS 180 (329)
T ss_dssp GGCCEEEEEECTTSCEEEEEEEEEECCCCSCEEEEEETTSSTTTCEEEECCCCSCCCCCEEEEEETTEECCCSSSSEEEE
T ss_pred CCCcEEEEEEeCCCceeeEEEEEEEcCCCcEeccccceEEeCCCcEEEEeccCCCCCCceEEEEECCccCCCCCceEecC
Confidence 58 89999999887533332223334555554444344567899999999999999 89999999999885321
Q ss_pred CCeeEEeec--CCCCeEEEeeeCC----cccee----EEeecCCCCCCCccccCCcceeEecCCcEEEEEeeeeCC---C
Q psy2441 75 NPRYNLLTS--GAPGTYIKIKPNL----FSPLS----VYSADKIPPGFPQITEAPSTKVVEISHTTVLHCSASGNP---P 141 (212)
Q Consensus 75 ~~~~~~~~~--~~~g~~l~i~~~~----~~~~~----v~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p---~ 141 (212)
...+.+... +|.|.|.|...+. ..... +...+..++........+....+.+|+.+.|.|.+.+.| .
T Consensus 181 ~~~L~I~~v~~~D~G~Y~C~a~n~~~~g~~~~~~s~~~~l~V~~~~~~~~~~~~~~~~~v~~G~~~~l~C~~~g~p~~~~ 260 (329)
T 3oq3_B 181 GQNLIIHNPELEDSGRYDCYVHYDDVRIKNDIVVSRCKILTVIPSQDHRFKLILDPKINVTIGEPANITCTAVSTSLLVD 260 (329)
T ss_dssp TTEEEECSCCGGGCEEEEEEEEECCTTSSSCEEEEEEEEEEEECCCCCCEEEECCSEEEECTTSCEEEEEEEEETTCCTT
T ss_pred CCEEEEeecChhhCEEEEEEEEecccCCCceeEEEeeEEEEEECCCCCCCceecCCeeEEecCCCEEEEEEEEECCCCCC
Confidence 122333322 4889999988742 11111 111111111111111255567788999999999999998 6
Q ss_pred C-ceEEEeCCEEecCCCCCceEE-cCCC--CceeEEEcCCCCCCCe-eEEEEEEcccccceecceEEEEe
Q psy2441 142 P-KISWIREMLPVDTSRNPRYNL-LTSG--APGALQITNSIEEDQG-KYECVAENEVGTEYSPSTMLYVK 206 (212)
Q Consensus 142 ~-~i~W~~~~~~~~~~~~~~~~~-~~~~--~~~~l~i~~~~~~d~g-~y~C~a~n~~g~~~~~~~~l~v~ 206 (212)
+ .+.|++++..+.......... ..++ ....|.|.+++.+|.| .|+|.|.|..|..... +.|.|+
T Consensus 261 ~i~v~W~~~g~~i~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~~Y~C~a~N~~G~~~~~-~~l~v~ 329 (329)
T 3oq3_B 261 DVLIDWENPSGWIIGLDFGVYSILTSSGGITEATLYFENVTEEYIGNTYTCRGHNYYFDKTLT-TTVVLE 329 (329)
T ss_dssp CCEEEEECTTSCBCCBCSSEEEEEEEETTEEEEEEEESSCCGGGTTCEEEEEEECSSCEEEEE-EEEEEC
T ss_pred CcEEEEEECCeeeeccCCceeeeecccCceeEeEEEEEeccHHHCCCcEEEEEEecCCceEEE-EEEEeC
Confidence 7 889999988743221111111 0010 2378999999999999 9999999999998877 777664
No 33
>2y25_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin-like D; 3.50A {Homo sapiens}
Probab=99.93 E-value=1.9e-25 Score=164.06 Aligned_cols=200 Identities=19% Similarity=0.249 Sum_probs=136.6
Q ss_pred ceeeEEEeeccCCCcceecccccCCCCCeEEeCCCccEEeeCCeEEEEcccCC----------CCCCcEEEEeCCEEecC
Q psy2441 3 IGTYIKIKPNLFSPLSVYSADKIPPGFPQITEAPSTKVVEISHTTVLHCSASG----------NPPPKISWIREMLPVDT 72 (212)
Q Consensus 3 ~g~Y~C~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~----------~p~~~v~W~k~g~~l~~ 72 (212)
+|.|+|.+.|..+..... ..+.+..+|.+...+....+.+|+.+.|.|.+.+ .|.+.+.|+|+|..+..
T Consensus 73 ~G~Y~C~~~n~~g~~~~~-~~l~v~~~~~~~~~~~~~~~~~g~~~~l~c~~~~~~l~c~~~~~~p~~~i~W~~~~~~~~~ 151 (317)
T 2y25_A 73 AGIYEVILKDDRGKDKSR-LKLVDEAFKELMMEVCKKIALSATDLKIQSTAEGIQLYSFVTYYVEDLKVNWSHNGSAIRY 151 (317)
T ss_dssp CSCEEEEEESSSCEEEEE-ECCSTHHHHHHHHHHHHHHHTCBCCCEEEECSSEEEEEEEBSSCCSSCEEEEEESSSBCCC
T ss_pred CeEEEEEEECCCCcEEEE-EEEEEecCccccccCCceecccCCCeEEEeeccccEEEEEeccCCCCcEEEEEECCEECCC
Confidence 589999999988765433 3333333333333333445567777777777766 78899999999988875
Q ss_pred CCCCeeEE-----------eec--CCCCeEEEeeeCCcccee--EEeec-----------------CCCCCCCcccc-CC
Q psy2441 73 SRNPRYNL-----------LTS--GAPGTYIKIKPNLFSPLS--VYSAD-----------------KIPPGFPQITE-AP 119 (212)
Q Consensus 73 ~~~~~~~~-----------~~~--~~~g~~l~i~~~~~~~~~--v~~~~-----------------~~~~~~p~~~~-~~ 119 (212)
. .++.+ ... +|.|.|.|...+...... +.... ......|.+.. .+
T Consensus 152 ~--~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 229 (317)
T 2y25_A 152 S--DRVKTGVTGEQIWLQINEPTPNDKGKYVMELFDGKTGHQKTVDLSGQAYDEAYAEFQRLKQAAIAEKNRARVLGGLP 229 (317)
T ss_dssp C--SSEEEEECSSEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEECHHHHHHHHHHHHHHHHHHHHTTTSCEEEEBCC
T ss_pred C--CCeEEeccCCEEEEEECcCCcccCeeEEEEEEeCCceEEEEEEEeeeeccccchhhcccCCcccCcCCCCcccccCC
Confidence 4 33322 222 377788887766222111 11110 00111233332 34
Q ss_pred cceeEecCCcEEEEEeeeeCCCCceEEEeCCEEecCCCCCceEEcCC-CCceeEEEcCCCCCCCeeEEEEEEccccccee
Q psy2441 120 STKVVEISHTTVLHCSASGNPPPKISWIREMLPVDTSRNPRYNLLTS-GAPGALQITNSIEEDQGKYECVAENEVGTEYS 198 (212)
Q Consensus 120 ~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~-~~~~~l~i~~~~~~d~g~y~C~a~n~~g~~~~ 198 (212)
....+.+|+.+.|.|.+.++|.|.+.|++++..+... .++....+ +....|.|.++..+|+|.|.|.|.|..|....
T Consensus 230 ~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~~~~~--~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~ 307 (317)
T 2y25_A 230 DVVTIQEGKALNLTCNVWGDPPPEVSWLKNEKALASD--DHCNLKFEAGRTAYFTINGVSTADSGKYGLVVKNKYGSETS 307 (317)
T ss_dssp SEEEEETTSBBCEEEEEECSSCCEEEEEESSSEECCC--SSEEECCBTTTEEEEEEBSCCSTTCEEEEEEEEETTEEEEE
T ss_pred ccEEEEcCCEEEEEEEEecCCCCEEEEEECCEeCCCC--CcEEEEEcCCCEEEEEECCCCHHHCEEEEEEEEeCCCeEEE
Confidence 4567889999999999999999999999999988764 45555443 33469999999999999999999999999877
Q ss_pred cceEEEEecc
Q psy2441 199 PSTMLYVKGT 208 (212)
Q Consensus 199 ~~~~l~v~~~ 208 (212)
. +.|.|.++
T Consensus 308 ~-~~l~V~~P 316 (317)
T 2y25_A 308 D-FTVSVFIP 316 (317)
T ss_dssp E-EEEEEECC
T ss_pred E-EEEEEEcC
Confidence 7 88888754
No 34
>1e07_A Carcinoembryonic antigen; glycoprotein, CEA, tumour marker, immunoglobulin-fold; NMR {Homo sapiens} PDB: 2dks_A
Probab=99.93 E-value=7.9e-24 Score=169.30 Aligned_cols=196 Identities=20% Similarity=0.205 Sum_probs=145.4
Q ss_pred ceeeEEEeeccCCCcceecccccCCCCC-eEEeCCCccEEeeCCeEEEEcccCCCCCCcEEEEeCCEEecCCCCCeeEEe
Q psy2441 3 IGTYIKIKPNLFSPLSVYSADKIPPGFP-QITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREMLPVDTSRNPRYNLL 81 (212)
Q Consensus 3 ~g~Y~C~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~k~g~~l~~~~~~~~~~~ 81 (212)
+|.|+|.+.|..+........+.+..+| .+.+.+....+.+|+.+.|.|.+.+.|.+.+.|+|+|..+... ..+.+.
T Consensus 354 ~G~Y~C~a~n~~g~~~s~~~~l~V~~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~i~W~~~g~~~~~~--~~L~i~ 431 (642)
T 1e07_A 354 VGPYECGIQNELSVDHSDPVILNVLYGPDDPTISPSYTYYRPGVNLSLSCHAASNPPAQYSWLIDGNIQQHT--QELFIS 431 (642)
T ss_pred CeeEEEEEeCCCCCcceeeEEEEEEcCCCCCeecCCceEecCCCcEEEEEEcCccCCCeEEEEECCEEcCCC--ceEEEc
Confidence 6999999999888654443444443343 3346677788899999999999999999999999999998775 556655
Q ss_pred ec--CCCCeEEEeeeCCc------cceeEEeecCCCCCCCccccCCcceeEecCCcEEEEEeeeeCCCCceEEEeCCEEe
Q psy2441 82 TS--GAPGTYIKIKPNLF------SPLSVYSADKIPPGFPQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREMLPV 153 (212)
Q Consensus 82 ~~--~~~g~~l~i~~~~~------~~~~v~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~ 153 (212)
.. +|.|.|.|...+.. ..+.+.... ++.+|.+.. .....+.+|+.+.|.|.+.+ |.+.+.|++++..+
T Consensus 432 ~~~~~d~G~Y~C~a~n~~g~~~~s~~~~v~v~~--~~~~p~i~~-~~~~~v~~g~~v~l~C~~~~-~~~~i~W~~~g~~l 507 (642)
T 1e07_A 432 NITEKNSGLYTCQANNSASGHSRTTVKTITVSA--ELPKPSISS-NNSKPVEDKDAVAFTCEPEA-QNTTYLWWVNGQSL 507 (642)
T ss_pred cCChhhCeEEEEEEEcCCCCCcccceEEEEEec--cCCCceEec-CCceeecCCCeEEEEEECCC-CCcEEEEEECCEeC
Confidence 43 48999999888722 223333221 112244433 33456778999999999984 77899999999988
Q ss_pred cCCCCCceEEcCCCCceeEEEcCCCCCCCeeEEEEEEcccccceecceEEEEecc
Q psy2441 154 DTSRNPRYNLLTSGAPGALQITNSIEEDQGKYECVAENEVGTEYSPSTMLYVKGT 208 (212)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~n~~g~~~~~~~~l~v~~~ 208 (212)
... .++....++ ..|.|.++..+|.|.|.|.|.|..|...+..+.|.|...
T Consensus 508 ~~~--~~~~~~~~~--~~L~i~~v~~~d~G~Y~C~a~n~~g~~~s~~~~l~V~~~ 558 (642)
T 1e07_A 508 PVS--PRLQLSNGN--RTLTLFNVTRNDARAYVCGIQNSVSANRSDPVTLDVLYG 558 (642)
T ss_pred CCC--CcEEEcCCC--cEEEEeecChhcCceEEEEeEcCCCCccCCCEEEEEEeC
Confidence 764 555555443 689999999999999999999999987654477777653
No 35
>2vr9_A Roundabout 1, ROBO; immunoglobulin-like domain, AXON guidance, cell adhesion, immunoglobulin domain; 3.2A {Drosophila melanogaster} PDB: 2vra_A*
Probab=99.92 E-value=1.1e-23 Score=146.78 Aligned_cols=172 Identities=29% Similarity=0.531 Sum_probs=129.1
Q ss_pred CCCCeEEeCCCccEEeeCCeEEEEcccCCCCCCcEEEEeCCEEecCCCC--Cee-----------EEe--ecCCCCeEEE
Q psy2441 27 PGFPQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREMLPVDTSRN--PRY-----------NLL--TSGAPGTYIK 91 (212)
Q Consensus 27 ~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~k~g~~l~~~~~--~~~-----------~~~--~~~~~g~~l~ 91 (212)
..+|.+...+....+.+|+.+.|.|.+.+.|.+.+.|+|+|..+..... .++ .+. ..+|.|.|.|
T Consensus 7 ~~~P~i~~~p~~~~v~~G~~v~L~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C 86 (217)
T 2vr9_A 7 YQSPRIIEHPTDLVVKKNEPATLNCKVEGKPEPTIEWFKDGEPVSTNEKKSHRVQFKDGALFFYRTMQGKKEQDGGEYWC 86 (217)
T ss_dssp CCCCEEEECCCCEEECTTSCEEECCEEECSSCCEEEEEETTEECCCSSSSSSEEECTTSCEEESSCCBSSSCBCCEEEEE
T ss_pred cCCCEEecCCCceEEeCCCcEEEEEEcCCCCCCeEEEEECCcCccCCCccceeEEecCCceEEEEEeccCCcccCceEEE
Confidence 5789999999999999999999999999999999999999988865311 111 111 1148899999
Q ss_pred eeeCC-------ccceeEEeecCCCCCCCccccCCcceeEecCCcEEEEEee-eeCCCCceEEEeCCEEecCC------C
Q psy2441 92 IKPNL-------FSPLSVYSADKIPPGFPQITEAPSTKVVEISHTTVLHCSA-SGNPPPKISWIREMLPVDTS------R 157 (212)
Q Consensus 92 i~~~~-------~~~~~v~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~-~~~p~~~i~W~~~~~~~~~~------~ 157 (212)
..... ...+.|... +|.+...+....+.+|+.+.|.|.+ .+.|.+.+.|++++..+... .
T Consensus 87 ~~~n~~g~~~~~~~~l~v~~~------~~~~~~~~~~~~~~~g~~v~l~C~~~~g~p~~~v~W~~~g~~~~~~~~~~~~~ 160 (217)
T 2vr9_A 87 VAKNRVGQAVSRHASLQIAVL------RDDFRVEPKDTRVAKGETALLECGPPKGIPEPTLIWIKDGVPLDDLKAMSFGA 160 (217)
T ss_dssp EEEETTEEEECCCEEEEECEE------CCSCSBCCCCEEECTTSCEEECCBCCCEESCCEEEEEETTEEECCCCCC---C
T ss_pred EEecCCCccccccceEEEEEe------CCCcEECCCccEEcCCCeEEEEEECCCCCCCCeEEEEECCcCCCccccccccc
Confidence 87752 222333221 2455556666778899999999999 89999999999999988743 1
Q ss_pred CCceEEcCCCCceeEEEcCCCCCCCeeEEEEEEcccccceecceEEEEec
Q psy2441 158 NPRYNLLTSGAPGALQITNSIEEDQGKYECVAENEVGTEYSPSTMLYVKG 207 (212)
Q Consensus 158 ~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~n~~g~~~~~~~~l~v~~ 207 (212)
..++....+ +.|.|.++..+|.|.|.|.|.|..|........|.+..
T Consensus 161 ~~~~~~~~~---~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~~~lv~~~ 207 (217)
T 2vr9_A 161 SSRVRIVDG---GNLLISNVEPIDEGNYKCIAQNLVGTRESSYAKLIVQV 207 (217)
T ss_dssp CCSEEEETT---TEEEESSCCSTTCEEEEEEEEETTEEEECCCEEEEEC-
T ss_pred CCcEEecCC---CcEEEeeCCHHHCeEEEEEEEcccceeccccEEEEEEe
Confidence 233444444 68999999999999999999999999887745555544
No 36
>2c5d_C AXL oncogene, tyrosine-protein kinase receptor UFO; signaling protein/receptor, growth regulation/complex, vitamin K-dependent protein; HET: NAG; 3.3A {Homo sapiens}
Probab=99.92 E-value=7.1e-24 Score=145.41 Aligned_cols=162 Identities=19% Similarity=0.380 Sum_probs=123.5
Q ss_pred CCCeEEeCCCccEEeeCCeEEEEcccC-CCCCCcEEEEeCCEEecCCCC------------------CeeEEeec--CCC
Q psy2441 28 GFPQITEAPSTKVVEISHTTVLHCSAS-GNPPPKISWIREMLPVDTSRN------------------PRYNLLTS--GAP 86 (212)
Q Consensus 28 ~~p~~~~~~~~~~v~~g~~v~l~C~~~-~~p~~~v~W~k~g~~l~~~~~------------------~~~~~~~~--~~~ 86 (212)
++|.|...|.+..+.+|+.+.|.|.+. +.|.+.+.|+|+|..+..... ..+.+... .|.
T Consensus 1 e~~~~~~~p~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~ 80 (195)
T 2c5d_C 1 EESPFVGNPGNITGARGLTGTLRCQLQVQGEPPEVHWLRDGQILELADSTQTQVPLGEDEQDDWIVVSQLRITSLQLSDT 80 (195)
T ss_dssp -CCSEEECCCCEEECTTCCEEEEEEEEEESSCCCCEEEETTEECCSCEEEEEEEECSSSTTSEEEEEEEEEESSCCSTTC
T ss_pred CCCeeccChhheEEecCCcEEEecccccCCCCcEEEEEECCEEcccCCCCceEEEEccccccceeeccEEEEEeccccCC
Confidence 478899999999999999999999998 899999999999998876411 11222222 478
Q ss_pred CeEEEeeeCCc-------cceeEEeecCCCCCCCccccCCcceeEecCCcEEEEEeeeeCCCC-ceEEEeCCEEecCCCC
Q psy2441 87 GTYIKIKPNLF-------SPLSVYSADKIPPGFPQITEAPSTKVVEISHTTVLHCSASGNPPP-KISWIREMLPVDTSRN 158 (212)
Q Consensus 87 g~~l~i~~~~~-------~~~~v~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~-~i~W~~~~~~~~~~~~ 158 (212)
|.|.|...... ..+.|. .+|.+...+....+.+|+.+.|.|.+.+.|.| .+.|++++..+.....
T Consensus 81 G~Y~C~~~~~~~~~~~~~~~l~V~-------~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~~v~W~~~~~~~~~~~~ 153 (195)
T 2c5d_C 81 GQYQCLVFLGHQTFVSQPGYVGLE-------GLPYFLEEPEDRTVAANTPFNLSCQAQGPPEPVDLLWLQDAVPLATAPG 153 (195)
T ss_dssp EEEEEEEEETTEEEECCCEEEEEC-------CSCEEEECCCCEEECTTCCEEEEEEEECSSCCCEEEEEESSCBSSSSTT
T ss_pred cEEEEEEEeCCCceecccEEEEEe-------cCCeEEcCCCcEEEcCCCEEEEEeECCCCCCCCEEEEEECCEeccCCCC
Confidence 88888766521 222222 22667667777788899999999999999999 9999999988776411
Q ss_pred CceEEcCCCCceeEEEcCCCCCCCeeEEEEEEcccccceecceEEEE
Q psy2441 159 PRYNLLTSGAPGALQITNSIEEDQGKYECVAENEVGTEYSPSTMLYV 205 (212)
Q Consensus 159 ~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~n~~g~~~~~~~~l~v 205 (212)
. ..+ ..|.|.+++ |+|.|.|.|.|..|...+..+.|.|
T Consensus 154 --~--~~~---~~L~i~~~~--d~G~Y~C~a~N~~g~~~s~~~~l~V 191 (195)
T 2c5d_C 154 --H--GPQ---RSLHVPGLN--KTSSFSCEAHNAKGVTTSRTATITV 191 (195)
T ss_dssp --S--SCC---EEEEECCCS--SCEEEEEEEEETTEEEECCCEEEEE
T ss_pred --c--CCC---CeEEEcccc--cCceEEEEEEcCCCceEEEEEEEEE
Confidence 1 222 789999887 7899999999999988643378877
No 37
>3b5h_A Cervical EMMPRIN, HAB18G/CD147; IG-like domain, cell invasion; 2.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.92 E-value=1.2e-23 Score=143.03 Aligned_cols=165 Identities=16% Similarity=0.283 Sum_probs=121.2
Q ss_pred cEEeeCCeEEEEcccCCCCCC--cEEEEeCCEEecCCC----CCeeEEeecCCCCeEEEeeeCCccceeEEeecCCCCCC
Q psy2441 39 KVVEISHTTVLHCSASGNPPP--KISWIREMLPVDTSR----NPRYNLLTSGAPGTYIKIKPNLFSPLSVYSADKIPPGF 112 (212)
Q Consensus 39 ~~v~~g~~v~l~C~~~~~p~~--~v~W~k~g~~l~~~~----~~~~~~~~~~~~g~~l~i~~~~~~~~~v~~~~~~~~~~ 112 (212)
..+.+|+.+.|.|.+.+.|.+ .+.|+|+|..+.... ...+.+...+|.|.|.|....... ..+...+.. +
T Consensus 8 ~~v~~G~~v~l~C~~~~~~~p~~~~~W~k~~~~l~~~~~~~~~~~l~i~~~~d~G~Y~C~~~n~~~-~~~~l~V~~---~ 83 (184)
T 3b5h_A 8 TVEDLGSKILLTCSLNDSATEVTGHRWLKGGVVLKEDALPGQKTEFKVDSDDQWGEYSCVFLPEPM-GTANIQLHG---P 83 (184)
T ss_dssp EEEEETTEEEEEEEEESCSSCCCEEEEESSSEEEECTTCCCSEEEEEECGGGCCEEEEEEEESTTS-CEEEEEECC---S
T ss_pred EEEecCCCEEEEEECCCCCCCceEEEEEeCCEEeecccccCCcEEEEEechhhCeEEEEEEECCcC-cEEEEEEec---C
Confidence 467899999999999877766 899999999887542 124444434589999999885211 222222222 2
Q ss_pred CccccCCcceeEecCCcEEEEEeeeeCC-CCceEEEe---CCEE-ecCCCCCceEEcCCCCceeEEEcCCC-CCCCeeEE
Q psy2441 113 PQITEAPSTKVVEISHTTVLHCSASGNP-PPKISWIR---EMLP-VDTSRNPRYNLLTSGAPGALQITNSI-EEDQGKYE 186 (212)
Q Consensus 113 p~~~~~~~~~~~~~g~~~~l~C~~~~~p-~~~i~W~~---~~~~-~~~~~~~~~~~~~~~~~~~l~i~~~~-~~d~g~y~ 186 (212)
|.+...+....+.+|+.+.|.|.+.+.| .+.+.|++ ++.. +......++....++....|.|.++. .+|.|.|.
T Consensus 84 P~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~~d~G~Y~ 163 (184)
T 3b5h_A 84 PRVKAVKSSEHINEGETAMLVCKSESVPPVTDWAWYKITDSEDKALMNGSESRFFVSSSQGRSELHIENLNMEADPGQYR 163 (184)
T ss_dssp CCCEESCSEEEECTTSCEEEEEECCCSSCCCEEEEEECCSSSCEECCTTGGGTEEEEEETTEEEEEECSCCTTTSSEEEE
T ss_pred CceeecCCCcEEcCCCcEEEEEEECCCCCCCeEEEEEcCCCCCEEeecCCCCEEEEEecCCeeEEEEeeccccccCceEE
Confidence 6666666667788999999999999999 79999999 4443 33322355655554445699999999 89999999
Q ss_pred EEEEcccccceecceEEEEecc
Q psy2441 187 CVAENEVGTEYSPSTMLYVKGT 208 (212)
Q Consensus 187 C~a~n~~g~~~~~~~~l~v~~~ 208 (212)
|.|.|..|..... +.|.|+.+
T Consensus 164 C~a~N~~g~~~~~-~~l~V~~r 184 (184)
T 3b5h_A 164 CNGTSSKGSDQAI-ITLRVRSH 184 (184)
T ss_dssp EEEEETTEEEEEE-EEEEEC--
T ss_pred EEEEeCCCcceEE-EEEEEecC
Confidence 9999999998877 88888653
No 38
>1e07_A Carcinoembryonic antigen; glycoprotein, CEA, tumour marker, immunoglobulin-fold; NMR {Homo sapiens} PDB: 2dks_A
Probab=99.92 E-value=1.8e-23 Score=167.21 Aligned_cols=183 Identities=19% Similarity=0.226 Sum_probs=135.6
Q ss_pred ceeeEEEeeccCCCcceec-ccccCC---CCCeEEeCCCccEEeeCCeEEEEcccCCCCCCcEEEEeCCEEecCCC----
Q psy2441 3 IGTYIKIKPNLFSPLSVYS-ADKIPP---GFPQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREMLPVDTSR---- 74 (212)
Q Consensus 3 ~g~Y~C~~~~~~~~~~~~~-~~~~~~---~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~k~g~~l~~~~---- 74 (212)
+|.|+|.+.|..|...... ..+.+. .+|.+.. +....+.+|+.+.|.|.+.+ |.+.+.|+|+|..+....
T Consensus 438 ~G~Y~C~a~n~~g~~~~s~~~~v~v~~~~~~p~i~~-~~~~~v~~g~~v~l~C~~~~-~~~~i~W~~~g~~l~~~~~~~~ 515 (642)
T 1e07_A 438 SGLYTCQANNSASGHSRTTVKTITVSAELPKPSISS-NNSKPVEDKDAVAFTCEPEA-QNTTYLWWVNGQSLPVSPRLQL 515 (642)
T ss_pred CeEEEEEEEcCCCCCcccceEEEEEeccCCCceEec-CCceeecCCCeEEEEEECCC-CCcEEEEEECCEeCCCCCcEEE
Confidence 5899999999987654332 122222 3455443 44567889999999999984 788999999999886541
Q ss_pred ---CCeeEEeec--CCCCeEEEeeeCC-------ccceeEEeecCCCCCCCccccCCcceeEecCCcEEEEEeeeeCCCC
Q psy2441 75 ---NPRYNLLTS--GAPGTYIKIKPNL-------FSPLSVYSADKIPPGFPQITEAPSTKVVEISHTTVLHCSASGNPPP 142 (212)
Q Consensus 75 ---~~~~~~~~~--~~~g~~l~i~~~~-------~~~~~v~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~ 142 (212)
...+.+... .|.|.|.|...+. ...+.|... ++.+...+....+.+|+.+.|.|.+.+.|.|
T Consensus 516 ~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~s~~~~l~V~~~------p~~~~~~~~~~~v~~g~~~~l~C~~~g~p~p 589 (642)
T 1e07_A 516 SNGNRTLTLFNVTRNDARAYVCGIQNSVSANRSDPVTLDVLYG------PDTPIISPPDSSYLSGANLNLSCHSASNPSP 589 (642)
T ss_pred cCCCcEEEEeecChhcCceEEEEeEcCCCCccCCCEEEEEEeC------CCcceecCCceeEEcCCcEEEEEEeccCCCC
Confidence 122333322 4888999987762 233444321 1334455666778899999999999999999
Q ss_pred ceEEEeCCEEecCCCCCceEEcCCCCceeEEEcCCCCCCCeeEEEEEEcccccceecceEEEEec
Q psy2441 143 KISWIREMLPVDTSRNPRYNLLTSGAPGALQITNSIEEDQGKYECVAENEVGTEYSPSTMLYVKG 207 (212)
Q Consensus 143 ~i~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~n~~g~~~~~~~~l~v~~ 207 (212)
.+.|++++..+... ..|.|.++..+|.|.|.|.|.|..|..... +.|.|++
T Consensus 590 ~v~W~~~g~~i~~~-------------~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~s-~~l~V~v 640 (642)
T 1e07_A 590 QYSWRINGIPQQHT-------------QVLFIAKITPNNNGTYACFVSNLATGRNNS-IVKSITV 640 (642)
T ss_pred eEEEEECCEECccC-------------ceEEECcccccCCeEEEEEEEecccCccee-EEEEEEE
Confidence 99999999877643 689999999999999999999999998877 8887765
No 39
>3mjg_X Beta-type platelet-derived growth factor receptor; protein-protein complex, growth factor-receptor complex, TRA hormone complex; HET: NDG NAG; 2.30A {Homo sapiens}
Probab=99.92 E-value=1.5e-23 Score=152.10 Aligned_cols=202 Identities=13% Similarity=0.145 Sum_probs=127.9
Q ss_pred ceeeEEEeeccCCCcce--ecccccCCCC--CeEEeCCCc--cEEeeCCeEEEEcccCCCCCCcEEEEeCC--EEecCCC
Q psy2441 3 IGTYIKIKPNLFSPLSV--YSADKIPPGF--PQITEAPST--KVVEISHTTVLHCSASGNPPPKISWIREM--LPVDTSR 74 (212)
Q Consensus 3 ~g~Y~C~~~~~~~~~~~--~~~~~~~~~~--p~~~~~~~~--~~v~~g~~v~l~C~~~~~p~~~v~W~k~g--~~l~~~~ 74 (212)
+|.|+|.+.|..+.... ....+.+..+ |.+...+.. ..+.+|+.+.|.|.+. .|.+.++|++++ .++....
T Consensus 63 ~G~Y~C~a~n~~g~~~~~~~~~~v~v~~p~~~~~~~~~~~~~~~v~~G~~v~l~C~~~-~p~~~v~w~~~~~~~~~~~~~ 141 (289)
T 3mjg_X 63 TGEYFCTHNDSRGLETDERKRLYIFVPDPTVGFLPNDAEELFIFLTEITEITIPCRVT-DPQLVVTLHEKKGDVALPVPY 141 (289)
T ss_dssp CEEEEEECCC------CCCEEEEEECCCTTCCBCCCCHHHHEEEESSCCCEEECCCBS-CTTSCEEEEESSCCSCCCCCE
T ss_pred CEEEEEEEcccCCCCcCcEEeEEEEEECCCcCcccCCCCcceEEeecCCeEEEEeEcC-CCCceEEEEeCCCCCccceee
Confidence 59999999998865221 1222333222 221111121 5688999999999998 677889999864 3333211
Q ss_pred CCeeEEeecCCCCeEEEeeeCC-----ccceeEEeecCCCCCCCccccCCcceeEecCCcEEEEEeeeeCCCCceEEEeC
Q psy2441 75 NPRYNLLTSGAPGTYIKIKPNL-----FSPLSVYSADKIPPGFPQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIRE 149 (212)
Q Consensus 75 ~~~~~~~~~~~~g~~l~i~~~~-----~~~~~v~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~ 149 (212)
..+..+....|.|.|.|...+. ...+.+..... .+|.+...+....+.+|+.+.|.|.+.++|.|.+.|+++
T Consensus 142 ~~~~~~~~~~d~G~Y~C~a~n~~~~~~s~~~~l~v~~~---~~p~i~~~~~~~~v~~G~~v~L~C~~~g~p~p~v~W~~~ 218 (289)
T 3mjg_X 142 DHQRGFSGIFEDRSYICKTTIGDREVDSDAYYVYRLQV---SSINVSVNAVQTVVRQGENITLMCIVIGNEVVNFEWTYP 218 (289)
T ss_dssp ETTTEEEECCCSSEEEEEEEETTEEEECCCEEEEECCC---CCCCCEEEESCSEEETTSCEEEEEEEESCSSBEEEEECT
T ss_pred cCCcCeeeeccCcEEEEEEEeCCceeeeeeEEEEecCC---CCCCcEEeCCcceeEcCCCEEEEEEECCCCCcceEEEcC
Confidence 1112222334789999988741 11222222111 236666665667788999999999999999999999987
Q ss_pred CEEecCCCCCceEEcC---CCCceeEEEcCCCCCCCeeEEEEEEcccccceecceEEEEecce
Q psy2441 150 MLPVDTSRNPRYNLLT---SGAPGALQITNSIEEDQGKYECVAENEVGTEYSPSTMLYVKGTQ 209 (212)
Q Consensus 150 ~~~~~~~~~~~~~~~~---~~~~~~l~i~~~~~~d~g~y~C~a~n~~g~~~~~~~~l~v~~~~ 209 (212)
+............... ......|.|.++..+|+|.|.|.|.|..|..... +.|.|.+.+
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~-~~l~v~~~~ 280 (289)
T 3mjg_X 219 RKESGRLVEPVTDFLLDMPYHIRSILHIPSAELEDSGTYTCNVTESVNDHQDE-KAINITVVE 280 (289)
T ss_dssp TSSSSCCCCCEEEESCTTTTEEEEEEEESSCCSSCCEEEEEEEEETTTTEEEE-EEEEEEEEC
T ss_pred CccCCCcccccccccCCcceEEEEEEEEcccChhhCcEEEEEeecCCCCceeE-EEEEEEEEe
Confidence 6543332111111111 1124789999999999999999999999999888 888887654
No 40
>3p3y_A Neurofascin; IG domains, cell adhesion; HET: NAG; 2.60A {Homo sapiens} PDB: 3p40_A*
Probab=99.92 E-value=1.5e-23 Score=158.70 Aligned_cols=200 Identities=24% Similarity=0.288 Sum_probs=139.0
Q ss_pred ceeeEEEeeccCCCcceecccccCCCCCeEE-eCCCccEEeeCCeEEEEccc-CCCCCCcEEEEeCCEEec-CC------
Q psy2441 3 IGTYIKIKPNLFSPLSVYSADKIPPGFPQIT-EAPSTKVVEISHTTVLHCSA-SGNPPPKISWIREMLPVD-TS------ 73 (212)
Q Consensus 3 ~g~Y~C~~~~~~~~~~~~~~~~~~~~~p~~~-~~~~~~~v~~g~~v~l~C~~-~~~p~~~v~W~k~g~~l~-~~------ 73 (212)
+|.|+|.+.|..+........+.+..+|.+. ..+....+.+|+.+.|.|.+ .+.|.+.+.|++++.... ..
T Consensus 89 ~G~Y~C~a~n~~g~~~s~~~~l~V~~~p~~~~~~~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~ 168 (404)
T 3p3y_A 89 EGEYQCFARNKFGTALSNRIRLQVSKSPLWPKENLDPVVVQEGAPLTLQCNPPPGLPSPVIFWMSSSMEPITQDKRVSQG 168 (404)
T ss_dssp CEEEEEEEECSSCEEEEEEEEEEECCCCCCCCCCCCCEEEETTSCEEECCCCCCCSSCCEEEEECTTSCBCCCCSSEEEC
T ss_pred CEEEEEEEEcCCCeEeeeeEEEEEeccCccccCCCCCeEEccCCcEEEEeCCCCCCCCCeEEEeCCCccccCCCCcEEEc
Confidence 5999999999887764444455555555543 44456789999999999999 788999999999874332 21
Q ss_pred CCCeeEEeec--CC-CCeEEEeeeC---------CccceeEEeecCCCCCCCccccCC---cceeEecCCcEEEEEeeee
Q psy2441 74 RNPRYNLLTS--GA-PGTYIKIKPN---------LFSPLSVYSADKIPPGFPQITEAP---STKVVEISHTTVLHCSASG 138 (212)
Q Consensus 74 ~~~~~~~~~~--~~-~g~~l~i~~~---------~~~~~~v~~~~~~~~~~p~~~~~~---~~~~~~~g~~~~l~C~~~~ 138 (212)
.+..+.+... .| .|.|.|.... ....+.+.........+|.+.... ....+.+|+.+.|.|.+.+
T Consensus 169 ~~~~l~i~~v~~~d~~G~Y~C~a~n~~~~~~~~~~~~~l~v~~~~~~~~~~p~~~~~~~~~~~~~~~~G~~v~l~C~~~g 248 (404)
T 3p3y_A 169 HNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTTRGVAERTPSFMYPQGTASSQMVLRGMDLLLECIASG 248 (404)
T ss_dssp TTSCEEESSCCSGGGSSCBEEEEECTTTCCEEECCCBCEEEECCSCCCCCCCCBSSSCSSEEEEEEETTSCEEEECCBCC
T ss_pred CCCcEEEEeeeeccCCcceEEEEEeccccceeccCceeEEEeccCCccccCCccccccCCCCCceEecCCCEEEEEEECC
Confidence 0122333322 25 5889998765 123344443222222234444332 2356889999999999999
Q ss_pred CCCCceEEEeCCEEecCCCCCceEEcCCCCceeEEEcCCCCCCCeeEEEEEEcccccceecceEEEEecc
Q psy2441 139 NPPPKISWIREMLPVDTSRNPRYNLLTSGAPGALQITNSIEEDQGKYECVAENEVGTEYSPSTMLYVKGT 208 (212)
Q Consensus 139 ~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~n~~g~~~~~~~~l~v~~~ 208 (212)
.|.+.+.|++++..+... .......+ ..|.|.++..+|+|.|.|.|.|..|..... +.|.|...
T Consensus 249 ~p~~~v~W~~~~~~~~~~--~~~~~~~~---~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~-~~l~V~~~ 312 (404)
T 3p3y_A 249 VPTPDIAWYKKGGDLPSD--KAKFENFN---KALRITNVSEEDSGEYFCLASNKMGSIRHT-ISVRVKAA 312 (404)
T ss_dssp SSCCEEEEEETTBCCCTT--TEEEEGGG---TEEEESSCCGGGCEEEEEEEECSSCEEEEE-EEEEEEEE
T ss_pred CCCCcEEEEECCEECCCC--cccccccC---ceEEEccCCHhHCEEEEEEEEeCCCcEEEE-EEEEEeCC
Confidence 999999999999887654 22112222 689999999999999999999999987766 77777654
No 41
>1epf_A NCAM, protein (neural cell adhesion molecule); immunoglobulin fold, glycoprotein; 1.85A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 PDB: 2ncm_A 3ncm_A
Probab=99.92 E-value=1.6e-23 Score=143.12 Aligned_cols=169 Identities=20% Similarity=0.315 Sum_probs=123.9
Q ss_pred CCeEEeCCCccEEeeCCeEEEEcccCCCC-CCcEEEEe-CCEEecCCCCCeeEEe------------ec--CCCCeEEEe
Q psy2441 29 FPQITEAPSTKVVEISHTTVLHCSASGNP-PPKISWIR-EMLPVDTSRNPRYNLL------------TS--GAPGTYIKI 92 (212)
Q Consensus 29 ~p~~~~~~~~~~v~~g~~v~l~C~~~~~p-~~~v~W~k-~g~~l~~~~~~~~~~~------------~~--~~~g~~l~i 92 (212)
++.+...|.+..+.+|+.+.|.|.+.+.+ .+.+.|+| +|..+... ..++.+. .. +|.|.|.|.
T Consensus 2 p~~v~~~p~~~~v~~G~~v~l~C~~~~~~~~~~v~W~~~~g~~~~~~-~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~ 80 (191)
T 1epf_A 2 VLQVDIVPSQGEISVGESKFFLCQVAGDAKDKDISWFSPNGEKLSPN-QQRISVVWNDDDSSTLTIYNANIDDAGIYKCV 80 (191)
T ss_dssp -CCEEEESSSEEEETTCCEEEEEEECCCSCCCEEEEECTTSCEECCB-SSSEEEEEEETTEEEEEECSCCGGGCEEEEEE
T ss_pred ceEEEecCCCcEEcCCCCEEEEEECCCCCCCceEEEEeCCCccccCC-CCeEEEEECCCCceEEEEccCCcccCEEEEEE
Confidence 56778888899999999999999998876 78899999 88877632 1233322 11 378888887
Q ss_pred eeCCc---cceeEEeecCCCCCCCccccCCcceeEecCCcEEEEEeeeeCCCCceEEEeCCEEecCCCCCceEEcCCCCc
Q psy2441 93 KPNLF---SPLSVYSADKIPPGFPQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREMLPVDTSRNPRYNLLTSGAP 169 (212)
Q Consensus 93 ~~~~~---~~~~v~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~ 169 (212)
..... ....+..... .+|.+...+....+.+|+.+.|.|.+.+.|.|.+.|++++..+......++....+
T Consensus 81 ~~~~~~~~~~~~~~l~v~---~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~--- 154 (191)
T 1epf_A 81 VTAEDGTQSEATVNVKIF---QKLMFKNAPTPQEFKEGEDAVIVCDVVSSLPPTIIWKHKGRDVILKKDVRFIVLSN--- 154 (191)
T ss_dssp EEETTTEEEEEEEEEEEE---CCSEEEECCSSEECCTTSCEEECCEEECSSCCEEEEEETTEEGGGGCCTTEEECTT---
T ss_pred EEcCCCcceEEEEEEEee---cCceEecCCCcEeecCCCeEEEEEEECCCCCCEEEEEECCEEeeccCCceEEEecC---
Confidence 66532 1111111111 12666666667778899999999999999999999999999887654456666655
Q ss_pred eeEEEcCCCCCCCeeEEEEEEcccccceecceEEEE
Q psy2441 170 GALQITNSIEEDQGKYECVAENEVGTEYSPSTMLYV 205 (212)
Q Consensus 170 ~~l~i~~~~~~d~g~y~C~a~n~~g~~~~~~~~l~v 205 (212)
+.|.|.++..+|.|.|.|.|.|..+..... ..+.|
T Consensus 155 ~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~-~~i~v 189 (191)
T 1epf_A 155 NYLQIRGIKKTDEGTYRCEGRILARGEINF-KDIQV 189 (191)
T ss_dssp SCEEETTCCGGGCEEEEEEEEEGGGTEEEE-EEEEE
T ss_pred CeEEECCCChhhCEEEEEEEEEecceeEEE-EEEEE
Confidence 689999999999999999999988654443 44444
No 42
>3dmk_A DOWN syndrome cell adhesion molecule (dscam) ISOF 1.30.30, N-terminal eight IG domains...; immunoglobulin domain; HET: NAG NDG; 4.19A {Drosophila melanogaster}
Probab=99.92 E-value=6.7e-24 Score=173.85 Aligned_cols=202 Identities=24% Similarity=0.344 Sum_probs=151.1
Q ss_pred ceeeEEEeeccCCCcceecccccCCCCCeEEeCCCccEEeeCCeEEEEcccCCCCCCcEEEEeCCEEecCCCCCeeEEee
Q psy2441 3 IGTYIKIKPNLFSPLSVYSADKIPPGFPQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREMLPVDTSRNPRYNLLT 82 (212)
Q Consensus 3 ~g~Y~C~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~k~g~~l~~~~~~~~~~~~ 82 (212)
+|.|+|.+.|..+..... ..+.+..+|.+...+....+.+|+.+.|.|.+.+.|.+.+.|+|+|..+... ...+.+..
T Consensus 318 ~G~Y~C~a~n~~g~~~~~-~~l~V~~~~~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~v~W~k~g~~~~~~-~~~L~i~~ 395 (816)
T 3dmk_A 318 SGKYLCVVNNSVGGESVE-TVLTVTAPLSAKIDPPTQTVDFGRPAVFTCQYTGNPIKTVSWMKDGKAIGHS-ESVLRIES 395 (816)
T ss_dssp CEEEEEEEECSSCEEEEE-EEEEECEEEEEEEESSEEECCTTSCEEEEEEEEEECCCEEEEEETTEECSCC-SSEEEESS
T ss_pred CEEEEEEEEcCCCceEEE-EEEEEcCCCceeeCCCceEecCCCCEEEEEEEeccCCCEEEEEECCEECCCC-CCEEEEcC
Confidence 599999999988865433 4445566777777888888999999999999999999999999999998754 24455544
Q ss_pred c--CCCCeEEEeeeCCccce--eEEeecCCCCCCCccccCCcceeEecCCcEEEEEeeeeCCCCceEEEeCCEEecCCCC
Q psy2441 83 S--GAPGTYIKIKPNLFSPL--SVYSADKIPPGFPQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREMLPVDTSRN 158 (212)
Q Consensus 83 ~--~~~g~~l~i~~~~~~~~--~v~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~~ 158 (212)
. +|.|.|.|...+..... .+.........+|.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+...
T Consensus 396 v~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~~~~p~i~~~~~~~~v~~G~~v~L~C~~~g~p~p~v~W~~~g~~l~~~-- 473 (816)
T 3dmk_A 396 VKKEDKGMYQCFVRNDRESAEASAELKLGGRFDPPVIRQAFQEETMEPGPSVFLKCVAGGNPTPEISWELDGKKIANN-- 473 (816)
T ss_dssp CCGGGCEEEEEEEECSSCEEEECCEEECCCSSCCCEEEEECCCEEECSSSCEEEEEEEECSSCCEEEEEETTEECCSC--
T ss_pred CCHHHCEEEEEEEECCCCcEEEEEEEEEccccCCCceEecCcceEEcCCCCEEEEEEEecCCCCEEEEEECCEECCCC--
Confidence 4 48999999887732211 11111111223466666666677889999999999999999999999999988764
Q ss_pred CceEE----cCC-CCceeEEEcCCCCCCCeeEEEEEEcccccceecceEEEEecce
Q psy2441 159 PRYNL----LTS-GAPGALQITNSIEEDQGKYECVAENEVGTEYSPSTMLYVKGTQ 209 (212)
Q Consensus 159 ~~~~~----~~~-~~~~~l~i~~~~~~d~g~y~C~a~n~~g~~~~~~~~l~v~~~~ 209 (212)
.++.. ..+ .....|.|.++..+|+|.|.|.|.|..|..... +.|.|...+
T Consensus 474 ~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~-~~l~V~~~p 528 (816)
T 3dmk_A 474 DRYQVGQYVTVNGDVVSYLNITSVHANDGGLYKCIAKSKVGVAEHS-AKLNVYGLP 528 (816)
T ss_dssp TTEEEEEEECTTSCEEEEEEESSCCTTTCEEEEEEEEETTEEEEEE-EEEEECSSC
T ss_pred CCcccccEEecCCCcEEEEEEeeccccCCEEEEEEEEECCCeEEEE-EEEEEecCC
Confidence 33321 112 123579999999999999999999999988777 888876543
No 43
>2v44_A NCAM2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, IG, membrane, homphilic, glycoprotein, transmembrane; 1.77A {Homo sapiens} PDB: 2xy2_A* 2vaj_A
Probab=99.92 E-value=1.3e-23 Score=143.33 Aligned_cols=167 Identities=22% Similarity=0.335 Sum_probs=119.7
Q ss_pred eEEeCCCccEEeeCCeEEEEcccCCCCCCcEEEEe-CCEEecCCCCCeeEEee-----------c--CCCCeEEEeeeCC
Q psy2441 31 QITEAPSTKVVEISHTTVLHCSASGNPPPKISWIR-EMLPVDTSRNPRYNLLT-----------S--GAPGTYIKIKPNL 96 (212)
Q Consensus 31 ~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~k-~g~~l~~~~~~~~~~~~-----------~--~~~g~~l~i~~~~ 96 (212)
.+...+....+.+|+.+.|.|.+.+.|. .+.|+| +|..+... .++.+.. . +|.|.|.|.....
T Consensus 4 ~~~~~~~~~~v~~G~~v~L~C~~~~~p~-~v~W~~~~~~~~~~~--~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~ 80 (189)
T 2v44_A 4 QVTISLSKVELSVGESKFFTCTAIGEPE-SIDWYNPQGEKIIST--QRVVVQKEGVRSRLTIYNANIEDAGIYRCQATDA 80 (189)
T ss_dssp EEEESCSEEEEETTCCEEEEEEEEECCS-EEEEECTTSCBCCCC--SSEEEEEETTEEEEEECSCCGGGCEEEEEEEECT
T ss_pred EEEecCCceEEecCCcEEEEEEeecCCe-eEEEEeCCCCccCCC--ceEEEECCCCeEEEEEccCCcccCeEEEEEEEeC
Confidence 5667888899999999999999988877 899999 77776554 3333222 1 3788888887763
Q ss_pred cc---ceeEEeecCCCCCCCccccCCcceeEecCCcEEEEEeeeeCCCCceEEEeCCEEecCCCCCceEEcCCCCceeEE
Q psy2441 97 FS---PLSVYSADKIPPGFPQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREMLPVDTSRNPRYNLLTSGAPGALQ 173 (212)
Q Consensus 97 ~~---~~~v~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~l~ 173 (212)
.. ...+...... +|.+...+....+..|+.+.|.|.+.+.|.|.+.|++++..+......++....+ +.|.
T Consensus 81 ~g~~~~~~~~l~v~~---~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~---~~L~ 154 (189)
T 2v44_A 81 KGQTQEATVVLEIYQ---KLTFREVVSPQEFKQGEDAEVVCRVSSSPAPAVSWLYHNEEVTTISDNRFAMLAN---NNLQ 154 (189)
T ss_dssp TSCEEEEEEEEEEEC---CCEEESCCCSEEEETTSCEEECCEEECSSCCEEEEEEEC--CEECCCTTEEECTT---SCEE
T ss_pred CCCcEEEEEEEEEec---CCceeecCCcEEEeCCCCEEEEEEECcCCCCcEEEEECCcEEeccCCCCEEEecC---CcEE
Confidence 21 1111111111 2555555566778899999999999999999999999998876433456666665 6899
Q ss_pred EcCCCCCCCeeEEEEEEcccccceec-ceEEEEe
Q psy2441 174 ITNSIEEDQGKYECVAENEVGTEYSP-STMLYVK 206 (212)
Q Consensus 174 i~~~~~~d~g~y~C~a~n~~g~~~~~-~~~l~v~ 206 (212)
|.++..+|.|.|.|.|.|..|..... .+.+.|+
T Consensus 155 i~~v~~~d~G~Y~C~a~n~~~~~~~~~~~~v~Vn 188 (189)
T 2v44_A 155 ILNINKSDEGIYRCEGRVEARGEIDFRDIIVIVN 188 (189)
T ss_dssp ETTCCGGGCEEEEEEEEETTTTEEEEEEEEEEEE
T ss_pred EEEcCcccCeEEEEEEEccccCceeeeeEEEEEe
Confidence 99999999999999999998655433 2444443
No 44
>1rhf_A Tyrosine-protein kinase receptor TYRO3; AXL/TYRO3 family, cellular adhesion, ligand-independent DIME mutational analysis, transferase; HET: EPE; 1.96A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4
Probab=99.92 E-value=3.2e-23 Score=140.57 Aligned_cols=160 Identities=23% Similarity=0.330 Sum_probs=118.6
Q ss_pred CCeEEeCCCccEEeeCCeEEEEcccCCCCCCcEEEEeCCEEecCCCC-----------CeeEEeec--CCCCeEEEeeeC
Q psy2441 29 FPQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREMLPVDTSRN-----------PRYNLLTS--GAPGTYIKIKPN 95 (212)
Q Consensus 29 ~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~k~g~~l~~~~~-----------~~~~~~~~--~~~g~~l~i~~~ 95 (212)
+|.|...|....+.+|+.+.|.|.+.+.|.+.+.|+|++..+..... ..+.+... +|.|.|.|....
T Consensus 2 ~~~~~~~p~~~~v~~G~~v~l~C~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~ 81 (182)
T 1rhf_A 2 GLKLMGAPVKLTVSQGQPVKLNCSVEGMEEPDIQWVKDGAVVQNLDQLYIPVSEQHWIGFLSLKSVERSDAGRYWCQVED 81 (182)
T ss_dssp -----CCCEEEEEETTCCEEEEEEEESCSSCCEEEEETTEECCSSEEEEEEEETTEEEEEEEESSCCGGGCEEEEEEESS
T ss_pred CCEEEeCCcceEEeCCCcEEEEEEEeCCCCCeEEEEECCeecCCCCceEEEecCCCceEEEEEeecCcccCeEEEEEEEc
Confidence 46777788889999999999999999989999999999988876411 11222221 378888888766
Q ss_pred C-------ccceeEEeecCCCCCCCccccCCcceeEecCCcEEEEEeeeeCCCC-ceEEEeCCEEecCCCCCceEEcCCC
Q psy2441 96 L-------FSPLSVYSADKIPPGFPQITEAPSTKVVEISHTTVLHCSASGNPPP-KISWIREMLPVDTSRNPRYNLLTSG 167 (212)
Q Consensus 96 ~-------~~~~~v~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~-~i~W~~~~~~~~~~~~~~~~~~~~~ 167 (212)
. ...+.|.. +|.+...+....+.+|+.+.|.|.+.+.|.| .+.|++++..+... . ...
T Consensus 82 ~~~~~~~~~~~l~V~~-------~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~~v~W~~~~~~~~~~--~----~~~- 147 (182)
T 1rhf_A 82 GGETEISQPVWLTVEG-------VPFFTVEPKDLAVPPNAPFQLSCEAVGPPEPVTIVWWRGTTKIGGP--A----PSP- 147 (182)
T ss_dssp CTTCEECCCEEEEEEC-------SCEEEECCCCEEECTTCCEEEEEEEECSSSCCEEEEEETTEECSCS--E----ESS-
T ss_pred CCCcEEEEEEEEEEec-------CCeEEecCcceEecCCCEEEEEeEecCCCCCCEEEEEcCCeECCCC--C----CCc-
Confidence 2 22233332 2677777777788999999999999999999 99999999887653 1 122
Q ss_pred CceeEEEcCCCCCCCeeEEEEEEcccccceecceEEEEe
Q psy2441 168 APGALQITNSIEEDQGKYECVAENEVGTEYSPSTMLYVK 206 (212)
Q Consensus 168 ~~~~l~i~~~~~~d~g~y~C~a~n~~g~~~~~~~~l~v~ 206 (212)
..|.|.++ +|+|.|.|.|.|..|...+..+.|.|+
T Consensus 148 --~~L~i~~~--~d~G~Y~C~a~N~~g~~~s~~~~l~Vk 182 (182)
T 1rhf_A 148 --SVLNVTGV--TQSTMFSCEAHNLKGLASSRTATVHLQ 182 (182)
T ss_dssp --EEEEECCC--SSCEEEEEEEEETTEEEECCCEEEEEC
T ss_pred --eEEEEecc--ccCeEEEEEEECCCCCcccceEEEEeC
Confidence 78999988 589999999999999886544777764
No 45
>2rik_A Titin; I-SET IG fold, poly-IG linear array, structural protein; 1.60A {Oryctolagus cuniculus} PDB: 2rjm_A
Probab=99.92 E-value=5.5e-23 Score=148.77 Aligned_cols=173 Identities=23% Similarity=0.437 Sum_probs=128.9
Q ss_pred CCCCeEEeCCCccEEeeCCeEEEEcccCCCCCCcEEEEeCCEEecCCCCCe---------eEEeec--CCCCeEEEeeeC
Q psy2441 27 PGFPQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREMLPVDTSRNPR---------YNLLTS--GAPGTYIKIKPN 95 (212)
Q Consensus 27 ~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~k~g~~l~~~~~~~---------~~~~~~--~~~g~~l~i~~~ 95 (212)
..||.|...|.+..+.+|+.+.|.|.+.+.|.+.+.|+|+|..+......+ +.+... +|.|.|.|....
T Consensus 3 ~~pP~~~~~p~~~~~~~G~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~n 82 (284)
T 2rik_A 3 MAPPFFDLKPVSVDLALGESGTFKCHVTGTAPIKITWAKDNREIRPGGNYKMTLVENTATLTVLKVTKGDAGQYTCYASN 82 (284)
T ss_dssp CCCCEEEECCCCEEEETTCCEEEEEEEESSSCCEEEEEETTEECCSSSSEEEEEETTEEEEEESSCCGGGCEEEEEEEEE
T ss_pred cCCCEEEccccceEecCCCcEEEEEEEEcCCCCEEEEEECCEECcCCCcEEEEEcCCEEEEEEecCCcccCEEEEEEEEE
Confidence 368999999999999999999999999999999999999999887652111 122111 377888887765
Q ss_pred C------ccceeEEeecCCCCCCCccccCC-cceeEecCCcEEEEEeeeeCCCCceEEEeCCEEecCCCCCceEEcCCCC
Q psy2441 96 L------FSPLSVYSADKIPPGFPQITEAP-STKVVEISHTTVLHCSASGNPPPKISWIREMLPVDTSRNPRYNLLTSGA 168 (212)
Q Consensus 96 ~------~~~~~v~~~~~~~~~~p~~~~~~-~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~ 168 (212)
. ...+.|.. +|.+.... ....+.+|+.+.|.|.+.+.|.+.+.|++++..+... .++.......
T Consensus 83 ~~g~~~~~~~l~V~~-------~p~~~~~~~~~~~v~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~--~~~~~~~~~~ 153 (284)
T 2rik_A 83 VAGKDSCSAQLGVQE-------PPRFIKKLEPSRIVKQDEHTRYECKIGGSPEIKVLWYKDETEIQES--SKFRMSFVES 153 (284)
T ss_dssp TTEEEEEEEEEEEEC-------CCEEEECCCSEEEEETTCCEEEEEEEESSSCCEEEEEETTEECCCS--SSEEEEEETT
T ss_pred CCceEEEEEEEEccC-------CCcccccCCCceEecCCceEEEEEEEeeeCCCEEEEEECCEECcCC--CcEEEEEcCC
Confidence 2 22233322 24444333 3356889999999999999999999999999988765 3333322222
Q ss_pred ceeEEEcCCCCCCCeeEEEEEEcccccceecceEEEEecce
Q psy2441 169 PGALQITNSIEEDQGKYECVAENEVGTEYSPSTMLYVKGTQ 209 (212)
Q Consensus 169 ~~~l~i~~~~~~d~g~y~C~a~n~~g~~~~~~~~l~v~~~~ 209 (212)
...|.|.++..+|.|.|.|.|.|..|..... +.|.|..++
T Consensus 154 ~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~-~~l~V~~~p 193 (284)
T 2rik_A 154 VAVLEMYNLSVEDSGDYTCEAHNAAGSASSS-TSLKVKEPP 193 (284)
T ss_dssp EEEEEECSCCGGGCEEEEEEEECSSCEEEEE-EEEEEECCC
T ss_pred EEEEEECCCCcccCEEEEEEEEcCCCceeEE-EEEEEecCC
Confidence 3789999999999999999999999987766 777776543
No 46
>2va4_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; transmembrane, phosphorylation, immunoglobulin domain, membrane, glycoprotein; HET: NAG; 1.9A {Homo sapiens} PDB: 2xy1_A*
Probab=99.92 E-value=2e-23 Score=142.64 Aligned_cols=169 Identities=24% Similarity=0.452 Sum_probs=120.6
Q ss_pred CCeEEeCCC--ccEEeeCCeEEEEcccCCCCCCcEEEEeCCEEecCCC-------CCeeEEeec--CCCCeEEEeeeCC-
Q psy2441 29 FPQITEAPS--TKVVEISHTTVLHCSASGNPPPKISWIREMLPVDTSR-------NPRYNLLTS--GAPGTYIKIKPNL- 96 (212)
Q Consensus 29 ~p~~~~~~~--~~~v~~g~~v~l~C~~~~~p~~~v~W~k~g~~l~~~~-------~~~~~~~~~--~~~g~~l~i~~~~- 96 (212)
||.+.+.+. +..+.+|+.+.|.|.+.+.|.+.+.|+|+|..+.... ...+.+... .|.|.|.|.....
T Consensus 2 pP~i~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~ 81 (192)
T 2va4_A 2 MPAISMPQKSFNATAERGEEMTFSCRASGSPEPAISWFRNGKLIEENEKYILKGSNTELTVRNIINSDGGPYVCRATNKA 81 (192)
T ss_dssp CCEEECSCCEEEEETTSCCCEEEECEEECSSCCEEEEEETTEECCCSSSEEEETTTTEEEECSCCGGGCEEEEEEEEETT
T ss_pred CCcccCCCCCcEEEEecCCCEEEEEeeccCCCCeEEEEECCeEcCCCccEEEeCCeeEEEEecCChhcCcEEEEEEEccc
Confidence 677776554 4677889999999999999999999999999887541 122333322 3788888877552
Q ss_pred -----ccceeEEeecCCCCCCCccccCCcceeEecCCcEEEEEeeeeCCCCceEEEeC--CEEecCC---CCCceEEcCC
Q psy2441 97 -----FSPLSVYSADKIPPGFPQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIRE--MLPVDTS---RNPRYNLLTS 166 (212)
Q Consensus 97 -----~~~~~v~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~--~~~~~~~---~~~~~~~~~~ 166 (212)
...+.|... |.+... ....+.+|+.+.|.|.+.+.|.+.+.|+++ +..+... ...++.....
T Consensus 82 ~~~~~~~~l~V~~~-------p~~~~~-~~~~~~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (192)
T 2va4_A 82 GEDEKQAFLQVFVQ-------PHIIQL-KNETTYENGQVTLVCDAEGEPIPEITWKRAVDGFTFTEGDKSLDGRIEVKGQ 153 (192)
T ss_dssp EEEEEEEEEEEEEE-------EEEEEE-CCEEECTTSEEEEEEEEEEESCCEEEEEETTTTEEECTTCBCTTSCEEEEEE
T ss_pred cccceEEEEEEEcc-------Cccccc-CcceEEeCCeEEEEEEecCCCCCcEEEEeCCCCceeeccccccCCcEEEeec
Confidence 223333332 333332 234566799999999999999999999998 5555432 1234444333
Q ss_pred CCceeEEEcCCCCCCCeeEEEEEEcccccceecceEEEEe
Q psy2441 167 GAPGALQITNSIEEDQGKYECVAENEVGTEYSPSTMLYVK 206 (212)
Q Consensus 167 ~~~~~l~i~~~~~~d~g~y~C~a~n~~g~~~~~~~~l~v~ 206 (212)
.....|.|.++..+|.|.|.|.|.|..|..... +.|.|+
T Consensus 154 ~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~-~~l~V~ 192 (192)
T 2va4_A 154 HGSSSLHIKDVKLSDSGRYDCEAASRIGGHQKS-MYLDIE 192 (192)
T ss_dssp TTEEEEEEESCCGGGCEEEEEEEECSSCEEEEE-EEEEEC
T ss_pred cCceEEEEecCCcccCEEEEEEEEecCCceEEE-EEEEeC
Confidence 334789999999999999999999999997666 777664
No 47
>2v9r_A Roundabout homolog 1; proto-oncogene, differentiation, phosphorylation, disease MU neuronal development, immunoglobulin domain, chemotaxis; 2.00A {Homo sapiens} PDB: 2v9q_A
Probab=99.92 E-value=2.4e-23 Score=144.37 Aligned_cols=172 Identities=30% Similarity=0.518 Sum_probs=128.5
Q ss_pred CCCCeEEeCCCccEEeeCCeEEEEcccCCCCCCcEEEEeCCEEecCCC-----------CCeeEEe-------ecCCCCe
Q psy2441 27 PGFPQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREMLPVDTSR-----------NPRYNLL-------TSGAPGT 88 (212)
Q Consensus 27 ~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~k~g~~l~~~~-----------~~~~~~~-------~~~~~g~ 88 (212)
..+|.|...+....+.+|+.+.|.|.+.+.|.+.+.|+|++..+.... .....+. ...|.|.
T Consensus 7 ~~pp~i~~~p~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~ 86 (212)
T 2v9r_A 7 DFPPRIVEHPSDLIVSKGEPATLNCKAEGRPTPTIEWYKGGERVETDKDDPRSHRMLLPSGSLFFLRIVHGRKSRPDEGV 86 (212)
T ss_dssp CEEEEEEECCCCEEECTTCCEEECCEEEEESCCEEEEEETTEECCCTTTCTTCSEEECTTSCEEESSCCCCSSCCCSCEE
T ss_pred cCCcceecCCCceEEeCCCcEEEEEEcCCCCCCEEEEEECCEEeeccccccccceEEecCCcEEEEEEEecCCCcccCeE
Confidence 467888899999999999999999999888999999999998875431 1111111 2248899
Q ss_pred EEEeeeCC-------ccceeEEeecCCCCCCCccccCCcceeEecCCcEEEEEee-eeCCCCceEEEeCCEEecCCCCCc
Q psy2441 89 YIKIKPNL-------FSPLSVYSADKIPPGFPQITEAPSTKVVEISHTTVLHCSA-SGNPPPKISWIREMLPVDTSRNPR 160 (212)
Q Consensus 89 ~l~i~~~~-------~~~~~v~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~-~~~p~~~i~W~~~~~~~~~~~~~~ 160 (212)
|.|..... ...+.|... ++.+...+....+..|+.+.|.|.+ .+.|.+.+.|++++..+... ..+
T Consensus 87 Y~C~~~n~~g~~~~~~~~l~V~~~------~~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~v~W~~~~~~l~~~-~~~ 159 (212)
T 2v9r_A 87 YVCVARNYLGEAVSHDASLEVAIL------RDDFRQNPSDVMVAVGEPAVMECQPPRGHPEPTISWKKDGSPLDDK-DER 159 (212)
T ss_dssp EEEEEEETTEEEECCCEEEEECEE------CSSCSBCCCCEEEETTSCEEEECBCCCEESCCEEEEEETTEEECTT-STT
T ss_pred EEEEEECCCCceeecceEEEEEec------cccceeCCCceEecCCCcEEEEEecCCCCCCCEEEEEECCccCCCC-cce
Confidence 99987652 223333321 1344455566778899999999998 89999999999999988764 233
Q ss_pred eEEcCCCCceeEEEcCCCCCCCeeEEEEEEcccccceecceEEEEecce
Q psy2441 161 YNLLTSGAPGALQITNSIEEDQGKYECVAENEVGTEYSPSTMLYVKGTQ 209 (212)
Q Consensus 161 ~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~n~~g~~~~~~~~l~v~~~~ 209 (212)
+.. .+ ..|.|.++..+|.|.|.|.|.|..|...+..+.|.|..++
T Consensus 160 ~~~-~~---~~L~i~~~~~~d~G~Y~C~a~N~~g~~~s~~~~l~V~~~P 204 (212)
T 2v9r_A 160 ITI-RG---GKLMITYTRKSDAGKYVCVGTNMVGERESEVAELTVLERP 204 (212)
T ss_dssp EEE-ET---TEEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEEEC--
T ss_pred EEc-cC---CeEEEeeCCHhhCeeEEEEEecccCceecceEEEEEEeCc
Confidence 333 23 6899999999999999999999999876544788777654
No 48
>2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens}
Probab=99.92 E-value=3.8e-23 Score=151.08 Aligned_cols=176 Identities=20% Similarity=0.309 Sum_probs=130.3
Q ss_pred CCCeEEeCCCccEEeeCCeEEEEcccCCCCCCcEEEEeCCEEecCCCCCe------------eEEeec--CCCCeEEEee
Q psy2441 28 GFPQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREMLPVDTSRNPR------------YNLLTS--GAPGTYIKIK 93 (212)
Q Consensus 28 ~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~k~g~~l~~~~~~~------------~~~~~~--~~~g~~l~i~ 93 (212)
.+|.|...+.+..+.+|+.+.|.|.+.+.|.+.+.|+|+|..+.... .+ +.+... +|.|.|.|..
T Consensus 3 ~~P~~~~~p~~~~v~~G~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~-~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a 81 (305)
T 2nzi_A 3 MAPHFKEELRNLNVRYQSNATLVCKVTGHPKPIVKWYRQGKEIIADG-LKYRIQEFKGGYHQLIIASVTDDDATVYQVRA 81 (305)
T ss_dssp CCCEEEECCCCEEECTTCCEEEEEEEECSSCCEEEEEETTEECCCCS-SSEEEEEETTTEEEEEESSCCGGGCSEEEEEE
T ss_pred CCCeeeecccceEEeCCCcEEEEEEEeCCCCCeEEEEECCEEcccCC-CeEEEEECCCCEEEEEEccCChhhCeEEEEEE
Confidence 58999999999999999999999999999999999999998886431 12 222222 3788888887
Q ss_pred eCC------ccceeEEeecCCCCCCCccccCCcceeEecCCcEEEEEeeeeCCCCceEEEeCCEEecCCCCCceEEcCCC
Q psy2441 94 PNL------FSPLSVYSADKIPPGFPQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREMLPVDTSRNPRYNLLTSG 167 (212)
Q Consensus 94 ~~~------~~~~~v~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~ 167 (212)
.+. ...+.|...... ..|.....+....+..|+.+.|.|.+.+.|.+.+.|++++..+... .++......
T Consensus 82 ~n~~g~~~~~~~l~V~~~p~~--~~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~~--~~~~~~~~~ 157 (305)
T 2nzi_A 82 TNQGGSVSGTASLEVEVPAKI--HLPKTLEGMGAVHALRGEVVSIKIPFSGKPDPVITWQKGQDLIDNN--GHYQVIVTR 157 (305)
T ss_dssp EETTEEEEEEEEEEECEEEEE--CCCHHHHSSCCEEEETTCCEEEEEEEEEESCCEEEEEESSSBCCSS--SSCEEEECS
T ss_pred EcCCCCccceEEEEEecCCcc--CCCccccccccEEecCCCEEEEEEEECCCCCCEEEEEECCEECCCC--CcEEEEEcC
Confidence 652 223333321100 0122223334567888999999999999999999999999887654 444444333
Q ss_pred CceeEEEcC-CCCCCCeeEEEEEEcccccceecceEEEEecce
Q psy2441 168 APGALQITN-SIEEDQGKYECVAENEVGTEYSPSTMLYVKGTQ 209 (212)
Q Consensus 168 ~~~~l~i~~-~~~~d~g~y~C~a~n~~g~~~~~~~~l~v~~~~ 209 (212)
....|.|.+ +...|.|.|.|.|.|..|..... +.|.|...+
T Consensus 158 ~~~~l~i~~~~~~~d~G~Y~C~a~N~~G~~~~~-~~l~v~~~P 199 (305)
T 2nzi_A 158 SFTSLVFPNGVERKDAGFYVVCAKNRFGIDQKT-VELDVADVP 199 (305)
T ss_dssp SEEEEEETTCCCSTTCEEEEEEEEETTEEEEEE-EEEEEEBCC
T ss_pred CceEEEEecCCccCccEEEEEEEEeCCCceeeE-EEEEEecCC
Confidence 347899999 99999999999999999998777 888877654
No 49
>1fnl_A Low affinity immunoglobulin gamma FC region receptor III-B; beta sandwich, immunoglobulin-like, immune system receptor; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1e4j_A 1e4k_C* 1t83_C* 1t89_C* 3ay4_C*
Probab=99.92 E-value=5.9e-23 Score=138.58 Aligned_cols=162 Identities=14% Similarity=0.124 Sum_probs=121.4
Q ss_pred CCCCeEEeCCCccEEeeCCeEEEEcccCCCCCCc-EEEEeCCEEecCCCCCeeEEeec--CCCCeEEEeeeCCc----cc
Q psy2441 27 PGFPQITEAPSTKVVEISHTTVLHCSASGNPPPK-ISWIREMLPVDTSRNPRYNLLTS--GAPGTYIKIKPNLF----SP 99 (212)
Q Consensus 27 ~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~-v~W~k~g~~l~~~~~~~~~~~~~--~~~g~~l~i~~~~~----~~ 99 (212)
..+|.+...|....+.+|+.+.|.|.+.+.|.+. +.|+|+|..+... ...+.+... +|.|.|.|...... ..
T Consensus 5 ~~~p~i~~~p~~~~v~~G~~v~L~C~~~~~p~~~~~~W~~~~~~~~~~-~~~L~i~~~~~~d~G~Y~C~~~n~~~s~~~~ 83 (175)
T 1fnl_A 5 LPKAVVFLEPQWYSVLEKDSVTLKCQGAYSPEDNSTQWFHNESLISSQ-ASSYFIDAATVNDSGEYRCQTNLSTLSDPVQ 83 (175)
T ss_dssp CCCCEEEEESCCSEEETTCCEEEEEECCCBTTBCCCEEEETTEEEESS-CSEEEESSCCGGGCEEEEEECSSSCCCCCEE
T ss_pred CCCCEEEEcCCceeeeCCCcEEEEeeCCCCCCCcceEEEECCEEccCC-ceEEEEeCCCcccCEEEEEEeeCCcccccEE
Confidence 3678888888888999999999999999888776 8999999988654 344555443 48999999887622 23
Q ss_pred eeEEeecCCCCCCCccccCCcceeEecCCcEEEEEeeeeCCCC-ceEEEeCCEEecCCCCCceEEcCCCCceeEEEcCCC
Q psy2441 100 LSVYSADKIPPGFPQITEAPSTKVVEISHTTVLHCSASGNPPP-KISWIREMLPVDTSRNPRYNLLTSGAPGALQITNSI 178 (212)
Q Consensus 100 ~~v~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~-~i~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~ 178 (212)
+.|.. .+. ...+....+.+|+.+.|.|.+.+.+++ .+.|++++..+... ..+ ..|.|.++.
T Consensus 84 l~V~~-------~~~-~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~W~k~g~~~~~~-------~~~---~~L~i~~v~ 145 (175)
T 1fnl_A 84 LEVHI-------GWL-LLQAPRWVFKEEDPIHLRCHSWKNTALHKVTYLQNGKDRKYF-------HHN---SDFHIPKAT 145 (175)
T ss_dssp EEEEC-------SSE-EEECSCSEEETTCCEEEEEEECTTCCCEEEEEEETTEEEEEE-------EEC---CCEEESSCC
T ss_pred EEEeC-------CCc-eeeCCCceecCCCCEEEEEEcCCCCCceEEEEEECCeEccCC-------CCC---CEEEEcccC
Confidence 33331 122 222233567889999999999887665 99999999877431 112 689999999
Q ss_pred CCCCeeEEEEEEcccccceecceEEEEec
Q psy2441 179 EEDQGKYECVAENEVGTEYSPSTMLYVKG 207 (212)
Q Consensus 179 ~~d~g~y~C~a~n~~g~~~~~~~~l~v~~ 207 (212)
.+|.|.|.|.|.|..|...+..+.|.|.+
T Consensus 146 ~~d~G~Y~C~a~n~~~~~~s~~~~l~V~~ 174 (175)
T 1fnl_A 146 LKDSGSYFCRGLVGSKNVSSETVNITITQ 174 (175)
T ss_dssp GGGCEEEEEEEEETTEEEECCCEEEEEEC
T ss_pred hhhCeEEEEEEEcCCCCccCccEEEEEeC
Confidence 99999999999997766555547777765
No 50
>2ec8_A MAST/stem cell growth factor receptor; glycoprotein, receptor tyrosine kinase, growth factor cytoki dimerization, transferase; HET: NAG; 3.00A {Homo sapiens} PDB: 2e9w_A*
Probab=99.92 E-value=2.2e-23 Score=163.03 Aligned_cols=196 Identities=13% Similarity=0.111 Sum_probs=141.1
Q ss_pred ceeeEEEeeccCCCcceecccccCCCCCeEEeCCCccEEeeCCeEEEEcccCCCCCCcEEEEe-CCEEecCC------CC
Q psy2441 3 IGTYIKIKPNLFSPLSVYSADKIPPGFPQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIR-EMLPVDTS------RN 75 (212)
Q Consensus 3 ~g~Y~C~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~k-~g~~l~~~------~~ 75 (212)
+|.|+|.+.| +. .....+.+..+|.+...+....+.+|+.+.|.|.+.+.+.+.+.||| +|..+... ..
T Consensus 92 ~G~Y~C~a~n--g~--~~~~~l~V~~p~~~~~~~~~~~v~~G~~v~l~C~~~~~~~~~v~W~~~~g~~l~~~~~~~~~~~ 167 (524)
T 2ec8_A 92 TGKYTCTNKH--GL--SNSIYVFVRDPAKLFLVDRSLYGKEDNDTLVRCPLTDPEVTNYSLKGCQGKPLPKDLRFIPDPK 167 (524)
T ss_dssp CEEEEEEETT--SC--EEEEEEECCCSSCSBCCCCCCCEETTSCEEECCCBSCCCCSCEEEECSSSCCCCSSCEEEEETT
T ss_pred CEEEEEeecC--Cc--ceEEEEEECCCCcccccccceEEEcCCeEEEECcCCCCccceEEEEccCCcCcCCCCceeECCC
Confidence 5999999999 32 34455556666666677778899999999999999987778999998 78777543 11
Q ss_pred CeeEEeec--CCCC-eEEEeeeCC-------ccceeEEeecCCCCCCCccccCCcceeEecCCcEEEEEeeeeCCCCc-e
Q psy2441 76 PRYNLLTS--GAPG-TYIKIKPNL-------FSPLSVYSADKIPPGFPQITEAPSTKVVEISHTTVLHCSASGNPPPK-I 144 (212)
Q Consensus 76 ~~~~~~~~--~~~g-~~l~i~~~~-------~~~~~v~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~-i 144 (212)
..+.+... +|.| .|.|..... ...+.|... +..+|.+...+....+.+|+.+.|.|.+.+.|.+. +
T Consensus 168 ~~L~i~~~~~~d~G~~Y~C~a~n~~~~~~s~~~~l~V~~~---~~~~p~i~~~~~~~~v~~G~~v~L~C~~~g~p~p~~i 244 (524)
T 2ec8_A 168 AGIMIKSVKRAYHRLCLHCSVDQEGKSVLSEKFILKVRPA---FKAVPVVSVSKASYLLREGEEFTVTCTIKDVSSSVYS 244 (524)
T ss_dssp TEEEEESCCGGGTTCEEEEEEC----CCCCCCEECCEECC---CCSCCEEECSCSEEEEETTSCEEEEEEEEESSTTCEE
T ss_pred ccEEEeccchhhCCceEEEEEEECCceEEEEEEEEEEEeC---CCCCCcEEecCCcceEEcCCcEEEEEEEecCCCcEEE
Confidence 23333332 4888 999987752 233333321 12347777777777899999999999999999886 9
Q ss_pred EEEeCCEEe--cCCCCCceEEcCC---CCceeEEEcCCCCCCCeeEEEEEEcccccceecceEEEEecc
Q psy2441 145 SWIREMLPV--DTSRNPRYNLLTS---GAPGALQITNSIEEDQGKYECVAENEVGTEYSPSTMLYVKGT 208 (212)
Q Consensus 145 ~W~~~~~~~--~~~~~~~~~~~~~---~~~~~l~i~~~~~~d~g~y~C~a~n~~g~~~~~~~~l~v~~~ 208 (212)
.|++++..+ ... .+.....+ .....|.|.++..+|+|.|.|.|.|..|..... +.|.|..+
T Consensus 245 ~W~~~~~~~~~~~~--~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~g~~~~~-~~l~V~~~ 310 (524)
T 2ec8_A 245 TWKRENSQTKLQEK--YNSWHHGDFNYERQATLTISSARVNDSGVFMCYANNTFGSANVT-TTLEVVDK 310 (524)
T ss_dssp EEEETTCSCCCCEE--EEEEECSSSCEEEEEEEEESSCCTTTCEEEEEEEECSSCEEEEE-EEEEEESS
T ss_pred EEEeCCCCCccccc--cccccccCCccceEEEEEECCCCHHHCEEEEEEEEecCCceEEE-EEEEEecc
Confidence 999998773 221 11111111 113789999999999999999999999988776 88887654
No 51
>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A
Probab=99.91 E-value=7.4e-23 Score=154.33 Aligned_cols=171 Identities=22% Similarity=0.401 Sum_probs=129.7
Q ss_pred CCeEEeCCCccEEeeCCeEEEEcccCCCCCCcEEEEeC--CEEecCCC---CCeeEEe-----------ec--CCCCeEE
Q psy2441 29 FPQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIRE--MLPVDTSR---NPRYNLL-----------TS--GAPGTYI 90 (212)
Q Consensus 29 ~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~k~--g~~l~~~~---~~~~~~~-----------~~--~~~g~~l 90 (212)
+|.+.. +.+..+.+|+.+.|.|.+.|.|.+.|.|+|+ |..+.... ..++.+. .. +|.|.|.
T Consensus 1 ~P~i~~-~~~~~~~~G~~v~l~C~~~g~p~p~v~W~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~ 79 (389)
T 2jll_A 1 QPHIIQ-LKNETTYENGQVTLVCDAEGEPIPEITWKRAVDGFTFTEGDKSLDGRIEVKGQHGSSSLHIKDVKLSDSGRYD 79 (389)
T ss_dssp CCEEEE-CCCEEEETTSEEEEEEEEECSSCCEEEEEETTTTEEECC--CCSSSSEEEEECSSEEEEEEESCCGGGCEEEE
T ss_pred CCeEEe-cCceEEeCCCeEEEEEEeecccCCeEEEEeCCCCceeccCcCCCCCeEEEeccCCcceEEEcccChhhCEEEE
Confidence 467766 5677888999999999999999999999999 88875421 1333332 21 4888898
Q ss_pred EeeeC------CccceeEEeecCCCCCCCccccCCcceeEecCCcEEEEEeeeeCCCCceEEEeCCEEecCCCCCceEEc
Q psy2441 91 KIKPN------LFSPLSVYSADKIPPGFPQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREMLPVDTSRNPRYNLL 164 (212)
Q Consensus 91 ~i~~~------~~~~~~v~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~ 164 (212)
|...+ ....+.|... |.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+......++...
T Consensus 80 C~a~n~~g~~~~~~~l~V~~~-------P~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~i~W~~~g~~l~~~~~~~~~~~ 152 (389)
T 2jll_A 80 CEAASRIGGHQKSMYLDIEYA-------PKFISNQTIYYSWEGNPINISCDVKSNPPASIHWRRDKLVLPAKNTTNLKTY 152 (389)
T ss_dssp EEEECSSCEEEEEEEEEEEEE-------EEECCSCCEEEECTTCCEEEEECEEEESCCEEEEEETTEESSCTTCTTEEEE
T ss_pred EEEEeCCCCcceEEEEEEEeC-------CEEecCcceEEeccCCEEEEEEEEEecCCCeEEEEECCccCCcccCceEEEe
Confidence 88766 2334444432 5555555555678899999999999999999999999998877533456555
Q ss_pred CCCCceeEEEcCCCCCCCeeEEEEEEcccccceecceEEEEecc
Q psy2441 165 TSGAPGALQITNSIEEDQGKYECVAENEVGTEYSPSTMLYVKGT 208 (212)
Q Consensus 165 ~~~~~~~l~i~~~~~~d~g~y~C~a~n~~g~~~~~~~~l~v~~~ 208 (212)
.++....|.|.++...|.|.|.|.|.|..|..... +.+.+...
T Consensus 153 ~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~-~~l~v~~~ 195 (389)
T 2jll_A 153 STGRKMILEIAPTSDNDFGRYNCTATNHIGTRFQE-YILALADV 195 (389)
T ss_dssp ECSSCEEEEECCCSTTSSEEEEEEEEETTEEEEEE-EEEEECCC
T ss_pred ccCCEEEEEECCCChhhCEEEEEEEEcCCCcEEEE-EEEEecCC
Confidence 55445789999999999999999999999988766 66666443
No 52
>2v5m_A Dscam; neurobiology SPL immunoglobulin domain, cell adhesion, membrane, development protein; HET: NAG; 1.95A {Drosophila melanogaster} PDB: 2v5s_A* 2v5r_A*
Probab=99.91 E-value=1.3e-23 Score=158.44 Aligned_cols=182 Identities=20% Similarity=0.354 Sum_probs=128.6
Q ss_pred eeeEEEeeccCCCcceec---ccccCCCC-----CeEE-eCCCccEEeeCCeEEEEcccCCCCCCcEEEEeCCEEe----
Q psy2441 4 GTYIKIKPNLFSPLSVYS---ADKIPPGF-----PQIT-EAPSTKVVEISHTTVLHCSASGNPPPKISWIREMLPV---- 70 (212)
Q Consensus 4 g~Y~C~~~~~~~~~~~~~---~~~~~~~~-----p~~~-~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~k~g~~l---- 70 (212)
|.|+|.+.|..+...... ..+.+..+ |.+. .......+.+|+.+.|.|.+.+.|.+.+.|+|++..+
T Consensus 178 G~Y~C~~~n~~~~~~~~~~~~~~l~v~~~~~~~~p~~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~~~~~~~~~ 257 (388)
T 2v5m_A 178 KSYQCRTKHRLTGETRLSATKGRLVITEPISSSAPRTPALVQKPLELMVAHTISLLCPAQGFPAPSFRWYKFIEGTTRKQ 257 (388)
T ss_dssp CCEEEEEEETTTCCEEECSSCBCEEEECCCSCEEEECCSSCCCCEEEETTSCEEECCCCEEESCCEEEEEEECTTSSCEE
T ss_pred eeEEEEeccCCCCceeeccccceEEEecCCcCCCCcCccccCCceEEeeCCcEEEEEECCCCCCCEEEEEecCCCCcccc
Confidence 899999998764432211 12222222 2221 2234467889999999999999999999999974322
Q ss_pred --cCC-----CCCeeEEeec--CCCCeEEEeeeCC------ccceeEEeecCCCCCCCccccCCcceeEecCCcEEEEEe
Q psy2441 71 --DTS-----RNPRYNLLTS--GAPGTYIKIKPNL------FSPLSVYSADKIPPGFPQITEAPSTKVVEISHTTVLHCS 135 (212)
Q Consensus 71 --~~~-----~~~~~~~~~~--~~~g~~l~i~~~~------~~~~~v~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~ 135 (212)
... ....+.+... +|.|.|.|...+. ...+.|... |.+...+....+.+|+.+.|.|.
T Consensus 258 ~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~-------p~~~~~~~~~~v~~g~~~~l~C~ 330 (388)
T 2v5m_A 258 AVVLNDRVKQVSGTLIIKDAVVEDSGKYLCVVNNSVGGESVETVLTVTAP-------LSAKIDPPTQTVDFGRPAVFTCQ 330 (388)
T ss_dssp ECCCSSSEEEETTEEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEEEEE-------EEEEEESSEEEECTTSCEEEEEE
T ss_pred cccccCceecccCEEEECcCCHHHCeEEEEEEecCCCceeEEEEEEEeCC-------CccccCCCcEEecCCCCEEEEEE
Confidence 111 0123333332 4889999988762 223344332 55555666677889999999999
Q ss_pred eeeCCCCceEEEeCCEEecCCCCCceEEcCCCCceeEEEcCCCCCCCeeEEEEEEcccccceecceEEEE
Q psy2441 136 ASGNPPPKISWIREMLPVDTSRNPRYNLLTSGAPGALQITNSIEEDQGKYECVAENEVGTEYSPSTMLYV 205 (212)
Q Consensus 136 ~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~n~~g~~~~~~~~l~v 205 (212)
+.+.|.|.+.|++++..+... + ..|.|.++..+|+|.|.|.|.|..|..... +.|.|
T Consensus 331 ~~g~p~p~i~W~~~g~~i~~~---------~---~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~-~~l~V 387 (388)
T 2v5m_A 331 YTGNPIKTVSWMKDGKAIGHS---------E---SVLRIESVKKEDKGMYQCFVRNDRESAEAS-AELKL 387 (388)
T ss_dssp EEEECCCEEEEEETTEECSCC---------S---SEEEESSCCGGGCEEEEEEEECSSCEEEEE-EEEEE
T ss_pred eccccCCeEEEEECCEECccC---------C---CEEEEecCChhhCEEEEEEEEcCCCcEEEE-EEEEe
Confidence 999999999999999887542 1 689999999999999999999999998776 76655
No 53
>1f2q_A High affinity immunoglobulin epsilon receptor ALP subunit; immunoglobulin fold, glycoprotein, IGE-binding Pro immune system; HET: NAG MAN; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1j86_A* 1rpq_A* 2y7q_A* 1f6a_A* 1j88_A* 1j89_A* 1j87_A*
Probab=99.91 E-value=3.1e-23 Score=140.03 Aligned_cols=164 Identities=17% Similarity=0.195 Sum_probs=119.4
Q ss_pred CCCeEEeCCCccEEeeCCeEEEEcccCCCCCC-cEEEEeCCEEecCCCCCeeEEeec--CCCCeEEEeeeCCc----cce
Q psy2441 28 GFPQITEAPSTKVVEISHTTVLHCSASGNPPP-KISWIREMLPVDTSRNPRYNLLTS--GAPGTYIKIKPNLF----SPL 100 (212)
Q Consensus 28 ~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~-~v~W~k~g~~l~~~~~~~~~~~~~--~~~g~~l~i~~~~~----~~~ 100 (212)
.+|.+...|....+.+|+.+.|.|.+.+.+.+ .+.|+|++..+... ...+.+... +|.|.|.|...... ..+
T Consensus 3 ~~P~i~~~p~~~~v~~G~~v~L~C~~~~~~~~~~i~W~~~~~~~~~~-~~~L~i~~v~~~d~G~Y~C~~~~~~~s~~~~l 81 (176)
T 1f2q_A 3 QKPKVSLNPPWNRIFKGENVTLTCNGNNFFEVSSTKWFHNGSLSEET-NSSLNIVNAKFEDSGEYKCQHQQVNESEPVYL 81 (176)
T ss_dssp -CCCCEEESSCSEEETTCCEEEECCTTCC----CCEEEETTEECSCC-SSEEEECSCCGGGCEEEEEECTTSSCCCCEEE
T ss_pred CCCEEEcCCCCcceecCCcEEEEEeCCCCCCcceEEEEECCeECCCC-ceEEEEeccceecCEEEEEEcCCccccccEEE
Confidence 57888888888899999999999999888775 69999999988754 344555443 48999999887632 233
Q ss_pred eEEeecCCCCCCCccccCCcceeEecCCcEEEEEeee-eCCCCceEEEeCCEEecCCCCCceEEcCCCCceeEEEcCCCC
Q psy2441 101 SVYSADKIPPGFPQITEAPSTKVVEISHTTVLHCSAS-GNPPPKISWIREMLPVDTSRNPRYNLLTSGAPGALQITNSIE 179 (212)
Q Consensus 101 ~v~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~-~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~ 179 (212)
.|.. +.+........+.+|+.+.|.|.+. +.|.+.+.|++++..+... ..+ ..|.|.++..
T Consensus 82 ~V~~--------~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~~-------~~~---~~L~i~~v~~ 143 (176)
T 1f2q_A 82 EVFS--------DWLLLQASAEVVMEGQPLFLRCHGWRNWDVYKVIYYKDGEALKYW-------YEN---HNISITNATV 143 (176)
T ss_dssp EEEC--------SSEEEEESCSEEETTSCEEEEEEEGGGCCEEEEEEEETTEECCSC-------CCS---SEEEESSCCG
T ss_pred EEeC--------cceeecCCcceeeCCCCEEEEEEecCCCCceEEEEEECCEEEeee-------cCC---CeEEECCCCc
Confidence 3331 2222223335678999999999994 5677799999999887542 112 7899999999
Q ss_pred CCCeeEEEEEEcccccceecceEEEEeccee
Q psy2441 180 EDQGKYECVAENEVGTEYSPSTMLYVKGTQV 210 (212)
Q Consensus 180 ~d~g~y~C~a~n~~g~~~~~~~~l~v~~~~~ 210 (212)
+|+|.|.|.|.|..+...+..+.|.|...+.
T Consensus 144 ~d~G~Y~C~a~n~~~~~~s~~~~l~V~~~p~ 174 (176)
T 1f2q_A 144 EDSGTYYCTGKVWQLDYESEPLNITVIKAPR 174 (176)
T ss_dssp GGCEEEEEEEEETTEEEECCCEEEEEECSCC
T ss_pred ccCEEEEEEEEeCCcceEecCEEEEEecCCC
Confidence 9999999999997555444447787776653
No 54
>3rbs_A Myomesin-1; immunoglobulin C-SET domain, contractIle protein; 1.85A {Homo sapiens}
Probab=99.91 E-value=2.4e-23 Score=144.15 Aligned_cols=170 Identities=14% Similarity=0.111 Sum_probs=114.7
Q ss_pred CeEEeCCCccEEeeCCeEEEEcccC-CCCCCcEEEEeCCEEecCCCCCe-----------eEEeec--CCCCeEEEeeeC
Q psy2441 30 PQITEAPSTKVVEISHTTVLHCSAS-GNPPPKISWIREMLPVDTSRNPR-----------YNLLTS--GAPGTYIKIKPN 95 (212)
Q Consensus 30 p~~~~~~~~~~v~~g~~v~l~C~~~-~~p~~~v~W~k~g~~l~~~~~~~-----------~~~~~~--~~~g~~l~i~~~ 95 (212)
|.|.. +....+.+|+.+.|.|.+. ++|.|.|+|+|||.+|..+...+ +.+... +|.|.|.|...+
T Consensus 4 p~~~~-~~~~~v~eg~~v~l~c~~~~~~P~p~i~W~kng~~l~~~~~~~~~~~~~~g~~~L~I~~v~~~D~G~Y~C~a~N 82 (207)
T 3rbs_A 4 PFTKS-ELAVEILEKGQVRFWMQAEKLSGNAKVNYIFNEKEIFEGPKYKMHIDRNTGIIEMFMEKLQDEDEGTYTFQLQD 82 (207)
T ss_dssp --CCE-EEEEEECGGGCEEEEEECSCCCSCCEEEEEETTEEECSSSSCEEEECTTTCEEEEEESCCCGGGCEEEEEEEEE
T ss_pred Ceeec-CCceEEEeCCeEEEEEEEecCCCCCEEEEEECCEECccCCCEEEEEeCCCCEEEEEECCCChhhCEEEEEEEEC
Confidence 44433 3357889999999999985 47999999999999997652111 111111 367777776554
Q ss_pred CccceeEEeecC--------------C----CCCCCccccCCcceeEecCCcEEEEEeeeeC-CCCceEEEeCCEEecCC
Q psy2441 96 LFSPLSVYSADK--------------I----PPGFPQITEAPSTKVVEISHTTVLHCSASGN-PPPKISWIREMLPVDTS 156 (212)
Q Consensus 96 ~~~~~~v~~~~~--------------~----~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~-p~~~i~W~~~~~~~~~~ 156 (212)
..+......... . ...+|.+.... ...+.+|+.+.|.|.+.+. |.|.+.|++++..+...
T Consensus 83 g~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~-~~~v~~g~~v~l~C~v~g~~P~p~i~W~k~g~~l~~~ 161 (207)
T 3rbs_A 83 GKATNHSTVVLVGDVFKKLQKEAEFQRQEWIRKQGPHFVEYL-SWEVTGECNVLLKCKVANIKKETHIVWYKDEREISVD 161 (207)
T ss_dssp TTEEEEEEEEECTHHHHHHHHHHHHHHHHHHHHTSSEEEEEE-EEEEETTTEEEEEEEEESCCTTCEEEEEETTEEECCC
T ss_pred CCeEEEEEEEEEccchhhhcccccccccccccCCCCceEecC-CcEEcCCCcEEEEEEEeCCCCCCEEEEEECCEECCCC
Confidence 222111110000 0 00124444333 3668889999999999998 89999999999998764
Q ss_pred CCCceEEcCCCCceeEEEcCCCCCCCeeEEEEEEcccccceecceEEEEe
Q psy2441 157 RNPRYNLLTSGAPGALQITNSIEEDQGKYECVAENEVGTEYSPSTMLYVK 206 (212)
Q Consensus 157 ~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~n~~g~~~~~~~~l~v~ 206 (212)
.++.. ..+..+|.|.++..+|+|.|.|.|.|..|..... +.|.++
T Consensus 162 --~~~~~--~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~-~~L~~~ 206 (207)
T 3rbs_A 162 --EKHDF--KDGICTLLITEFSKKDAGIYEVILKDDRGKDKSR-LKLVDE 206 (207)
T ss_dssp --CCCCC--SSEEEEEEETTCCGGGCEEEEEEEEETTEEEEEE-EEECCC
T ss_pred --CceEc--CCCEEEEEECCCCcccCEEEEEEEEcCCCEEEEE-EEEecC
Confidence 33322 2223579999999999999999999999999877 766543
No 55
>4fom_A Poliovirus receptor-related protein 3; immunoglobulin-like domain, IG domain, cell adhesion; HET: NAG BMA MAN FUC; 3.93A {Homo sapiens}
Probab=99.91 E-value=6.3e-25 Score=160.86 Aligned_cols=196 Identities=18% Similarity=0.243 Sum_probs=130.6
Q ss_pred ceeeEEEeeccCCCcceecccccCCCCCeE--EeCCCccEEeeCCeEEEEccc-CCCCCCcEEEEeCCEEecCCC----C
Q psy2441 3 IGTYIKIKPNLFSPLSVYSADKIPPGFPQI--TEAPSTKVVEISHTTVLHCSA-SGNPPPKISWIREMLPVDTSR----N 75 (212)
Q Consensus 3 ~g~Y~C~~~~~~~~~~~~~~~~~~~~~p~~--~~~~~~~~v~~g~~v~l~C~~-~~~p~~~v~W~k~g~~l~~~~----~ 75 (212)
+|.|+|++.|...........+.+..+|.+ ...+......+|+.+.|.|.+ .+.|.+.|.|+|++.++.... .
T Consensus 86 ~G~Y~C~a~n~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~C~~~~g~P~~~i~W~~~~~~~~~~~~~~~~ 165 (308)
T 4fom_A 86 SGKYICKAVTFPLGNAQSSTTVTVLVEPTVSLIKGPDSLIDGGNETVAAICIAATGKPVAHIDWEGDLGEMESTTTSFPN 165 (308)
T ss_dssp CEEEEEEEEETTTEEEEEEEEEEEEBCCEEEEEECSSCCCTTCSCEEEEEEEEEEEBSCCEEEECCCSSBCCEEEEECTT
T ss_pred CEEEEEEEeeCCCcceeeeeEEEeeeccccccccccceeEEcCCceEEEEEEecCCcCCceEEEEECCcccccccceeee
Confidence 589999998865443333333444333333 345556666778999999986 678999999999987764321 0
Q ss_pred C------eeEEeec--CCCCeEEEeeeCCc----cceeEEeecCCCCCCCccccCC-cceeEecCCcEEEEEeeeeCCCC
Q psy2441 76 P------RYNLLTS--GAPGTYIKIKPNLF----SPLSVYSADKIPPGFPQITEAP-STKVVEISHTTVLHCSASGNPPP 142 (212)
Q Consensus 76 ~------~~~~~~~--~~~g~~l~i~~~~~----~~~~v~~~~~~~~~~p~~~~~~-~~~~~~~g~~~~l~C~~~~~p~~ 142 (212)
. .+.+... +|.|.|.|...+.. ....+...+. .+|.+...+ ....+..|+.+.|.|.+.++|.|
T Consensus 166 ~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~~~~~l~V~---~~P~~~~~~~~~~~~~~g~~v~l~C~~~g~P~p 242 (308)
T 4fom_A 166 ETATIISQYKLFPTRFARGRRITCVVKHPALEKDIRYSFILDIQ---YAPEVSVTGYDGNWFVGRKGVNLKCNADANPPP 242 (308)
T ss_dssp SCEEEEEEEEECCCGGGTTCEEEEEEECTTCSSCEEEEEECCCC---EEEEECCBCCCSCEETTCCSCEEECCEEEESCE
T ss_pred ecccccccceEEeeeecCCccEEEEEEccCCCCceEEeEEEEEe---cCCeeEEcccceeeeeccccEEEEEEEecCCCC
Confidence 1 1222221 48899999887622 1122221111 124444333 33556678899999999999988
Q ss_pred -ceEEEeCCEEecCCCCCceEEcCCCCceeEEEcCCCCCCCeeEEEEEEcccccceecceEEEEecce
Q psy2441 143 -KISWIREMLPVDTSRNPRYNLLTSGAPGALQITNSIEEDQGKYECVAENEVGTEYSPSTMLYVKGTQ 209 (212)
Q Consensus 143 -~i~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~n~~g~~~~~~~~l~v~~~~ 209 (212)
.+.|++++..+... . ...++ ..|.|.+++.+|+|.|.|.|.|..|..... +.|.|.+++
T Consensus 243 ~~v~W~k~~~~~~~~----~-~~~~~--~~l~i~~v~~~d~G~Y~C~A~N~~G~~~~~-~~l~V~~~P 302 (308)
T 4fom_A 243 FKSVWSRLDGQWPDG----L-LASDN--TLHFVHPLTFNYSGVYICKVTNSLGQRSDQ-KVIYISDPP 302 (308)
T ss_dssp EEEECCBSSSCCCSS----C-BCSTT--EEECCSCCCSCCCSEEEEEEEETTEEEEEE-EECCEECCC
T ss_pred cEEEEEECCeECCCc----E-EEcCC--eEEEECCCChhhCEEEEEEEEeCCCcEEEE-EEEEEEcCC
Confidence 69999998776543 1 11221 567788999999999999999999998777 777777654
No 56
>2ocw_A Polymeric-immunoglobulin receptor; SC, secretory, antibody, immunity, immune system; NMR {Homo sapiens} PDB: 3chn_S 3cm9_S 3chn_J 3cm9_J
Probab=99.91 E-value=4.9e-23 Score=163.04 Aligned_cols=200 Identities=13% Similarity=0.106 Sum_probs=138.6
Q ss_pred ceeeEEEeeccCCCcc---eecccccCCCCCeEEeCCCccEEeeCCeEEEEcccCCCCCCcE----EEEe--CCE--Eec
Q psy2441 3 IGTYIKIKPNLFSPLS---VYSADKIPPGFPQITEAPSTKVVEISHTTVLHCSASGNPPPKI----SWIR--EML--PVD 71 (212)
Q Consensus 3 ~g~Y~C~~~~~~~~~~---~~~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v----~W~k--~g~--~l~ 71 (212)
+|.|+|.+.|...... .....+.+..+|.+...+....+.+|+.+.|.|.+.+.|.+.+ .|+| +|. .+.
T Consensus 302 ~G~Y~C~a~n~g~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~G~~v~l~C~~~~~p~p~i~~w~~W~~~~~g~~~~l~ 381 (585)
T 2ocw_A 302 AGRYLCGAHSDGQLQEGSPIQAWQLFVNEESTIPRSPTVVKGVAGSSVAVLCPYNRKESKSIKYWCLWEGAQNGRCPLLV 381 (585)
T ss_pred CEEEEEEEEcCCCccccCceeeEEEEEecccccccCCcceEEEeCCcEEEEEecCCCCCccEEEEEEEEccCCCCCceee
Confidence 5899999999533221 1334555677888888888889999999999999999998877 7999 886 442
Q ss_pred CC-------CCCee-------------EEeec--CCCCeEEEeeeC-----CccceeEEeecCCCCCCCccccCCcceeE
Q psy2441 72 TS-------RNPRY-------------NLLTS--GAPGTYIKIKPN-----LFSPLSVYSADKIPPGFPQITEAPSTKVV 124 (212)
Q Consensus 72 ~~-------~~~~~-------------~~~~~--~~~g~~l~i~~~-----~~~~~~v~~~~~~~~~~p~~~~~~~~~~~ 124 (212)
.. ...|+ .+... +|.|.|.|+++. ....+.|.. .+|.+. .+....+
T Consensus 382 ~~~~~~~~~~~~r~~~~~~~~~g~~~L~I~~v~~~D~G~Y~C~an~~g~~~~~~~l~V~~------~~p~~~-~~~~~~v 454 (585)
T 2ocw_A 382 DSEGWVKAQYEGRLSLLEEPGNGTFTVILNQLTSRDAGFYWCLTNGDTLWRTTVEIKIIE------GEPNLK-VPGNVTA 454 (585)
T ss_pred eecceeecccCCCEEEeccCCCcEEEEEECCCChhhCEEEEEcccCCCccceeEEEEEec------Cccccc-cCCceeE
Confidence 21 11232 22222 488899998744 112222221 123333 3556778
Q ss_pred ecCCcEEEEEeee----eCCCCceEEEeCCEEecCCCC-C---ceEEcC-CCCceeEEEcCCCCCCCeeEEEEEEccccc
Q psy2441 125 EISHTTVLHCSAS----GNPPPKISWIREMLPVDTSRN-P---RYNLLT-SGAPGALQITNSIEEDQGKYECVAENEVGT 195 (212)
Q Consensus 125 ~~g~~~~l~C~~~----~~p~~~i~W~~~~~~~~~~~~-~---~~~~~~-~~~~~~l~i~~~~~~d~g~y~C~a~n~~g~ 195 (212)
.+|+.+.|.|.+. +.|.+.+.|++++..+..... . .+.... ++....|.|.++..+|+|.|+|.|.|..|.
T Consensus 455 ~~G~~v~L~C~~~~~~~~~p~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~ 534 (585)
T 2ocw_A 455 VLGETLKVPCHFPCKFSSYEKYWCKWNNTGCQALPSQDEGPSKAFVNCDENSRLVSLTLNLVTRADEGWYWCGVKQGHFY 534 (585)
T ss_pred ecCCcEEEEEEecCCCCCCccEEEEEeecCceeeeccCCCCCcceEEecCcccEEEEEECCCCcccCeEEEEEeEeCCCc
Confidence 8999999999996 677889999999987754311 1 122222 223469999999999999999999999987
Q ss_pred ceecceEEEEecce
Q psy2441 196 EYSPSTMLYVKGTQ 209 (212)
Q Consensus 196 ~~~~~~~l~v~~~~ 209 (212)
.....+.|.|+.++
T Consensus 535 ~~~~~~~l~V~~~p 548 (585)
T 2ocw_A 535 GETAAVYVAVEERK 548 (585)
T ss_pred cEEEEEEEEEEeee
Confidence 76544778887765
No 57
>4dkd_C Macrophage colony-stimulating factor 1 receptor; dimeric four-helix bundle cytokine, receptor tyrosine kinase glycosylation; HET: NAG BMA; 3.00A {Homo sapiens}
Probab=99.91 E-value=4.3e-24 Score=155.15 Aligned_cols=199 Identities=18% Similarity=0.151 Sum_probs=132.3
Q ss_pred ceeeEEEeeccCCCcceecccccCCCCCe-EEeCCCccEEeeCCeEEEEcccCCCCC--CcEEEEeC-CEEecCCC----
Q psy2441 3 IGTYIKIKPNLFSPLSVYSADKIPPGFPQ-ITEAPSTKVVEISHTTVLHCSASGNPP--PKISWIRE-MLPVDTSR---- 74 (212)
Q Consensus 3 ~g~Y~C~~~~~~~~~~~~~~~~~~~~~p~-~~~~~~~~~v~~g~~v~l~C~~~~~p~--~~v~W~k~-g~~l~~~~---- 74 (212)
+|.|+|.+.|..+.... ...+.+..+|. +...+....+.+|+.+.|.|.+.+ |. +.+.|+++ +..+....
T Consensus 63 ~G~Y~C~~~n~~~~~~~-~~~l~V~~~~~~~~~~~~~~~v~~g~~v~l~C~~~~-~~~~~~v~W~~~~~~~~~~~~~~~~ 140 (292)
T 4dkd_C 63 TGTYRCTEPGDPLGGSA-AIHLYVKDPARPWNVLAQEVVVFEDQDALLPCLLTD-PVLEAGVSLVRVRGRPLMRHTNYSF 140 (292)
T ss_dssp CSCEEECCCC----CCE-EECCEECCSSCCEEESCSEEEEETTSCEECCEEESS-GGGGSSEEEEEGGGCCCCSSCCEEC
T ss_pred CEEEEEEEccCCCCcce-EEEEEEcCccccccccCCeEEEcCCCcEEEeeeCCC-CCcceeEEEEecCCCccccCCcccc
Confidence 58999999998776543 34444545554 456777888999999999999987 44 68999997 55543321
Q ss_pred --CCeeEEeec--CCCCeEEEeeeCC-------ccceeEEeecCCCCCCCccccCCcceeEecCCcEEEEEeeeeCCC-C
Q psy2441 75 --NPRYNLLTS--GAPGTYIKIKPNL-------FSPLSVYSADKIPPGFPQITEAPSTKVVEISHTTVLHCSASGNPP-P 142 (212)
Q Consensus 75 --~~~~~~~~~--~~~g~~l~i~~~~-------~~~~~v~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~-~ 142 (212)
...+.+... .|.|.|.|..... ...+.|.. ..+.+|.+...+....+.+|+.+.|.|.+.+.|. +
T Consensus 141 ~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~s~~~~l~V~~---~~~~~p~i~~~~~~~~~~~g~~v~l~C~~~~~~~~~ 217 (292)
T 4dkd_C 141 SPWHGFTIHRAKFIQSQDYQCSALMGGRKVMSISIRLKVQK---VIPGPPALTLVPAELVRIRGEAAQIVCSASSVDVNF 217 (292)
T ss_dssp CSSSCCEETTCCGGGCSEEEEEECSTTSCEECCCEEEEEEC---CCCSSCEEEEESSCBCCCSSSCEEEEEEEEESSSCC
T ss_pred cCCceEEECCCCHHHCeEEEEEEEeCCCceeEEEEEEEEeC---CCCCCCeEEccCCceeEecCCCEEEEEEecCCCCce
Confidence 122344332 4889999988752 22333332 1122477777776666778999999999998775 4
Q ss_pred ceEEEeCCEEecCCCCCceEEcCCC--CceeEEEcCCCCCCCeeEEEEEEcccccceecceEEEEecce
Q psy2441 143 KISWIREMLPVDTSRNPRYNLLTSG--APGALQITNSIEEDQGKYECVAENEVGTEYSPSTMLYVKGTQ 209 (212)
Q Consensus 143 ~i~W~~~~~~~~~~~~~~~~~~~~~--~~~~l~i~~~~~~d~g~y~C~a~n~~g~~~~~~~~l~v~~~~ 209 (212)
.+.|++++..+... .......+. ....|.|.++..+|+|.|+|.|.|..|..... +.|.|+...
T Consensus 218 ~~~w~~~~~~~~~~--~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~-~~l~V~~~~ 283 (292)
T 4dkd_C 218 DVFLQHNNTKLAIP--QQSDFHNNRYQKVLTLNLDQVDFQHAGNYSCVASNVQGKHSTS-MFFRVVESA 283 (292)
T ss_dssp EEECCBSSCCCCCC--BEEEEETTEEEEEEEEEESSCCTTSCEEEEEEEECSSCEEEEE-EEECC----
T ss_pred EEEEeCCCcccccC--ccceeccceeeeEEEEEECccChhcCeEEEEEEecCCCCceeE-EEEEEeeCC
Confidence 68888888766543 111111110 12589999999999999999999999998777 777776654
No 58
>3sgj_C Human FCG3A receptor; receptor complex, FC receptor, antibody, immune system; HET: NAG BMA MAN FUC; 2.20A {Homo sapiens} PDB: 3sgk_C*
Probab=99.91 E-value=1.2e-22 Score=140.31 Aligned_cols=163 Identities=15% Similarity=0.157 Sum_probs=119.9
Q ss_pred CCCeEEeCCCccEEeeCCeEEEEcccCCCCCCc-EEEEeCCEEecCCCCCeeEEeec--CCCCeEEEeeeCCc----cce
Q psy2441 28 GFPQITEAPSTKVVEISHTTVLHCSASGNPPPK-ISWIREMLPVDTSRNPRYNLLTS--GAPGTYIKIKPNLF----SPL 100 (212)
Q Consensus 28 ~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~-v~W~k~g~~l~~~~~~~~~~~~~--~~~g~~l~i~~~~~----~~~ 100 (212)
.+|.+...|....+.+|+.+.|.|.+.+.|.+. +.|+|+|..+... ...+.+... +|.|.|.|...... ..+
T Consensus 6 p~p~i~~~p~~~~v~~G~~v~L~C~~~~~p~~~~v~W~k~g~~l~~~-~~~L~i~~v~~~D~G~Y~C~a~n~~~s~~~~l 84 (204)
T 3sgj_C 6 PKAVVFLEPQWYRVLEKDSVTLKCQGAYSPEDQSTQWFHNESLISSQ-ASSYFIDAATVDDSGEYRCQTQLSTLSDPVQL 84 (204)
T ss_dssp CBCEEEEESCCSEEETTCCEEEEEECCSSSSCCCEEEEETTEEESCC-SSEEEESSCCGGGCEEEEEEETTSBCCCCEEE
T ss_pred CCCeEEEcCCCeEEECCCCEEEEEcCCCCCCCcEEEEEECCEEcccC-ccEEEEecccccCCEEEEEEeCCCcccccEEE
Confidence 467778888888999999999999999988775 9999999998764 244555443 48999999887632 233
Q ss_pred eEEeecCCCCCCCccccCCcceeEecCCcEEEEEeeeeC-CCCceEEEeCCEEecCCCCCceEEcCCCCceeEEEcCCCC
Q psy2441 101 SVYSADKIPPGFPQITEAPSTKVVEISHTTVLHCSASGN-PPPKISWIREMLPVDTSRNPRYNLLTSGAPGALQITNSIE 179 (212)
Q Consensus 101 ~v~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~-p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~ 179 (212)
.|.. + |.+...+. ..+.+|+.+.|.|.+.+. |.+.+.|++++..+... ..+ ..|.|.++..
T Consensus 85 ~V~~----~---p~~~~~~~-~~v~~G~~v~L~C~~~~~~p~~~v~W~k~g~~~~~~-------~~~---~~L~i~~v~~ 146 (204)
T 3sgj_C 85 EVHI----G---WLLLQAPR-WVFKEEDPIHLRCHSWKNTALHKVTYLQNGKGRKYF-------HHN---SDFYIPKATL 146 (204)
T ss_dssp EEEC----S---SEEEECSC-SEEETTCCEEEEEEEGGGCCCEEEEEEETTEEEEEE-------EEC---CCEEESSCCG
T ss_pred EEec----C---ceEecCCc-eeEeCCCcEEEEEEecCCCCCceEEEEECCcEeecc-------cCC---ceEEECcCCc
Confidence 3332 1 33333333 567889999999999665 55799999999876432 112 6899999999
Q ss_pred CCCeeEEEEEEcccccceecceEEEEecce
Q psy2441 180 EDQGKYECVAENEVGTEYSPSTMLYVKGTQ 209 (212)
Q Consensus 180 ~d~g~y~C~a~n~~g~~~~~~~~l~v~~~~ 209 (212)
+|+|.|+|.|.|..+...+..+.|.|++.+
T Consensus 147 ~D~G~Y~C~a~n~~~~~~s~~~~l~V~~~~ 176 (204)
T 3sgj_C 147 KDSGSYFCRGLVGSKNVSSETVQITITQGL 176 (204)
T ss_dssp GGCEEEEEEEEETTEEEECCCEEEEEEC--
T ss_pred ccCEEEEEEEEeCCCceecCcEEEEEeCcC
Confidence 999999999999544444443888887654
No 59
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.91 E-value=4.8e-24 Score=158.81 Aligned_cols=193 Identities=14% Similarity=0.190 Sum_probs=131.3
Q ss_pred eeeEEEeeccCCCcceecccccCCCCCeEEeCCCccEEeeCCeEEEEcccCCCCCCcEEEEeCCEEecCC-------CCC
Q psy2441 4 GTYIKIKPNLFSPLSVYSADKIPPGFPQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREMLPVDTS-------RNP 76 (212)
Q Consensus 4 g~Y~C~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~k~g~~l~~~-------~~~ 76 (212)
+.|+|.+.+.... .......+|.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+... ...
T Consensus 138 ~~~~C~~~~~l~~-----l~~~~c~~P~i~~~~~~~~v~~G~~v~L~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~ 212 (347)
T 2ifg_A 138 QKLQCHGQGPLAH-----MPNASCGVPTLKVQVPNASVDVGDDVLLRCQVEGRGLEQAGWILTELEQSATVMKSGGLPSL 212 (347)
T ss_dssp GCCCCSSSSCSSC-----CCCTTCCCCEEEEECCSSCCBTTCCEEEEEEEECSSCCCCCEEESCCCSSEEECCCCCSSEE
T ss_pred cCCCCCCChHHhc-----CCcccCCCCceeccCCceEEeCCCcEEEEEEEecCCCCEEEEEcCCceeecccccceecccc
Confidence 6788887772221 2234467899998888999999999999999999999999999998654211 112
Q ss_pred eeEEeec--CCCC-eEEEeeeCCccceeEEeecCCCCCCCccccCCcceeEecCCcEEEEEeeeeCCCCceEEEeCCEEe
Q psy2441 77 RYNLLTS--GAPG-TYIKIKPNLFSPLSVYSADKIPPGFPQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREMLPV 153 (212)
Q Consensus 77 ~~~~~~~--~~~g-~~l~i~~~~~~~~~v~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~ 153 (212)
.+.+... .|.| .|.|................+ ..+|.+ ....+.+|+.+.|.|.+.|.|.|.+.|++++..+
T Consensus 213 ~L~i~~v~~~D~G~~Y~C~a~n~~g~~~~~~~l~V-~~~P~i----~~~~~~~g~~v~l~C~~~g~P~p~i~W~~~g~~l 287 (347)
T 2ifg_A 213 GLTLANVTSDLNRKNVTCWAENDVGRAEVSVQVNV-SFPASV----QLHTAVEMHHWCIPFSVDGQPAPSLRWLFNGSVL 287 (347)
T ss_dssp EEEEESCCSTTTTCCEEECCEETTEECCEEECCCC-BEEEEE----EECCCEESSSEEEEEEEEEESCCEEEEEETTEEC
T ss_pred eEEEeeCChHHCCCeEEEEEEcCCCCEEEEEEEEE-cCCCee----eeccCccCceEEEEEEeeecCCCcEEEEeCCEEC
Confidence 2333332 4888 999987663222111111111 011332 1223457999999999999999999999999988
Q ss_pred cCCCCCceEEcC-----CCCceeEEEcCCCCCCCeeEEEEEEcccccceecceEEEEec
Q psy2441 154 DTSRNPRYNLLT-----SGAPGALQITNSIEEDQGKYECVAENEVGTEYSPSTMLYVKG 207 (212)
Q Consensus 154 ~~~~~~~~~~~~-----~~~~~~l~i~~~~~~d~g~y~C~a~n~~g~~~~~~~~l~v~~ 207 (212)
............ ....++|.|.+++.+|+|.|+|.|.|..|..... +.|.|.+
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~N~~G~~~~~-~~l~V~~ 345 (347)
T 2ifg_A 288 NETSFIFTEFLEPAANETVRHGCLRLNQPTHVNNGNYTLLAANPFGQASAS-IMAAFMD 345 (347)
T ss_dssp CCCSSEEEEECCCCTTCCCEEEEEEESSCCGGGCEEEEEEEEETTEEEEEE-EEECSCC
T ss_pred CCCcceeeEEEeecCCCcccceEEEECCCCcccCceEEEEEecCCCceeeE-EEEEecC
Confidence 754221111111 0113679999999999999999999999988655 6555543
No 60
>3dmk_A DOWN syndrome cell adhesion molecule (dscam) ISOF 1.30.30, N-terminal eight IG domains...; immunoglobulin domain; HET: NAG NDG; 4.19A {Drosophila melanogaster}
Probab=99.91 E-value=2.9e-23 Score=170.08 Aligned_cols=194 Identities=21% Similarity=0.339 Sum_probs=138.7
Q ss_pred ceeeEEEeeccCCCcceecccccCCCCCeEE-eCCCccEEeeCCeEEEEcccCCCCC-CcEEEEeCCEEecCCC------
Q psy2441 3 IGTYIKIKPNLFSPLSVYSADKIPPGFPQIT-EAPSTKVVEISHTTVLHCSASGNPP-PKISWIREMLPVDTSR------ 74 (212)
Q Consensus 3 ~g~Y~C~~~~~~~~~~~~~~~~~~~~~p~~~-~~~~~~~v~~g~~v~l~C~~~~~p~-~~v~W~k~g~~l~~~~------ 74 (212)
+|.|+|.+.|..+........+.+..+|.+. ..+....+.+|+.+.|.|.+.+.+. +.+.|+|+|..+....
T Consensus 592 ~G~Y~C~a~n~~g~~~~~~~~v~v~~~p~~~~~~~~~~~~~~G~~v~L~C~~~~~~~~~~i~W~~~g~~l~~~~~~~~~~ 671 (816)
T 3dmk_A 592 QATYTCVAKNQEGYSARGSLEVQVMVLPRIIPFAFEEGPAQVGQYLTLHCSVPGGDLPLNIDWTLDGQAISEDLGITTSR 671 (816)
T ss_dssp CEEEEEEEEESSSCEEEEEEEEEEECCCCCBCCCCCSSCEESSCEEEEEEBCCCSSSCCEEEEEETTBCCCGGGTCEEEE
T ss_pred CEEEEEEEEECCCceeeeeEEEEEecCCccccccccccccCCCCeEEEEEEEeCCCCCCEEEEEECCeEcCCCCCeeEEE
Confidence 5899999999988644333444444555544 3345667899999999999976555 4899999998875321
Q ss_pred ----CCeeEEeec--CCCCeEEEeeeCC------ccceeEEeecCCCCCCCccccCCcceeEecCCcEEEEEeeeeCCCC
Q psy2441 75 ----NPRYNLLTS--GAPGTYIKIKPNL------FSPLSVYSADKIPPGFPQITEAPSTKVVEISHTTVLHCSASGNPPP 142 (212)
Q Consensus 75 ----~~~~~~~~~--~~~g~~l~i~~~~------~~~~~v~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~ 142 (212)
...+.+... +|.|.|.|...+. ...+.|.. +|.+...+....+.+|+.+.|.|.+.|.|.|
T Consensus 672 ~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~-------~P~~~~~~~~~~v~~G~~v~l~C~~~g~P~p 744 (816)
T 3dmk_A 672 VGRRGSVLTIEAVEASHAGNFTCHARNLAGHQQFTTPLNVYV-------PPRWILEPTDKAFAQGSDAKVECKADGFPKP 744 (816)
T ss_dssp ETTTEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEECEEE-------EEEEEECCCCEEEETTCCEEEECEEEEESCC
T ss_pred cCCCeeEEEEccCChhhCEEEEEEEEeCCccEEEEEEEEEEe-------CCceeeecccceecCCCcEEEEEEEecCCCC
Confidence 112333332 4788899987762 22333433 2677777777888899999999999999999
Q ss_pred ceEEEeCCEEecCC-----CCCceEEcCCCCceeEEEcCCCCCCCeeEEEEEEcccccceecceEEEEecc
Q psy2441 143 KISWIREMLPVDTS-----RNPRYNLLTSGAPGALQITNSIEEDQGKYECVAENEVGTEYSPSTMLYVKGT 208 (212)
Q Consensus 143 ~i~W~~~~~~~~~~-----~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~n~~g~~~~~~~~l~v~~~ 208 (212)
.+.|++++..++.. ...++.. .+ ++|.|.++..+|+|.|.|.|.|..|.+... +.+..+..
T Consensus 745 ~i~W~k~~~~~~~~~~~~~~~~~~~~-~~---~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~-v~~~~~~~ 810 (816)
T 3dmk_A 745 QVTWKKAVGDTPGEYKDLKKSDNIRV-EE---GTLHVDNIQKTNEGYYLCEAINGIGSGLSA-VIMISVQA 810 (816)
T ss_dssp EEECCEECSSSTTCCBCCCCBTTEEE-ET---TEEEECSCCGGGCEEEEEEEECSSSSCEEE-EEEEEEEC
T ss_pred eEEEEecCCCCCccccccccCCCEEe-cC---CEEEECcCChhhCeEEEEEEEeCCCCCcEE-EEEEEeec
Confidence 99999987554321 0112221 22 589999999999999999999999999988 66655544
No 61
>3ry4_A Low affinity immunoglobulin gamma FC region recep; FC receptor, CD32, immunoglobulin superfamily, low responder polymorphism, cell membrane; HET: NAG; 1.50A {Homo sapiens} PDB: 1fcg_A 3ry5_A 1h9v_A 3d5o_F* 3ry6_C* 2fcb_A
Probab=99.91 E-value=2.5e-22 Score=134.69 Aligned_cols=160 Identities=16% Similarity=0.226 Sum_probs=116.6
Q ss_pred CCCeEEeCCCccEEeeCCeEEEEcccCCCC-CCcEEEEeCCEEecCCCCCeeEEeec--CCCCeEEEeeeCCc----cce
Q psy2441 28 GFPQITEAPSTKVVEISHTTVLHCSASGNP-PPKISWIREMLPVDTSRNPRYNLLTS--GAPGTYIKIKPNLF----SPL 100 (212)
Q Consensus 28 ~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p-~~~v~W~k~g~~l~~~~~~~~~~~~~--~~~g~~l~i~~~~~----~~~ 100 (212)
.+|.+...|....+.+|+.+.|.|.+.+.| .+.+.|+|+|..+.......+ +... .|.|.|.|...... ..+
T Consensus 3 p~p~i~~~p~~~~v~~G~~v~l~C~~~~~p~~~~~~W~~~g~~~~~~~~~~~-~~~~~~~d~G~Y~C~~~~~~~s~~~~l 81 (170)
T 3ry4_A 3 PKAVLKLEPPWINVLQEDSVTLTCQGARSPESDSIQWFHNGNLIPTHTQPSY-RFKANNNDSGEYTCQTGQTSLSDPVHL 81 (170)
T ss_dssp CBCEEEEESCCSEEETTCEEEEEEESCCCSSSSCEEEEETTEECTTCCSSEE-EEECCGGGCEEEEEEETTSBCCCCEEE
T ss_pred CCCEEEeCCCCeEEECCCcEEEEEEecCCCCcceEEEEECCeEcccCccceE-EEecccccCeEEEEEEeCCCceEeEEE
Confidence 356677778888899999999999998886 568999999999876532222 2222 48899999887622 233
Q ss_pred eEEeecCCCCCCCccccCCcceeEecCCcEEEEEeee-eCCCCceEEEeCCEEecCCCCCceEEcCCCCceeEEEcCCCC
Q psy2441 101 SVYSADKIPPGFPQITEAPSTKVVEISHTTVLHCSAS-GNPPPKISWIREMLPVDTSRNPRYNLLTSGAPGALQITNSIE 179 (212)
Q Consensus 101 ~v~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~-~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~ 179 (212)
.|.. + +.+. ......+.+|+.+.|.|.+. +.|.+.+.|++++..+... ..+ ..|.|.++..
T Consensus 82 ~v~~----~---~~~~-~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~~-------~~~---~~L~i~~v~~ 143 (170)
T 3ry4_A 82 TVLF----E---WLVL-QTPHLEFQEGETIMLRCHSWKDKPLVKVTFFQNGKSQKFS-------HLD---PTFSIPQANH 143 (170)
T ss_dssp EEEC----C---SEEE-ECSCSEECTTCCEEEEEEEGGGCCEEEEEEEETTEEEEEE-------SSC---CEEEESSCCG
T ss_pred EEEC----C---ceEe-cCCCceeecCCeEEEEEECCCCCCCceEEEEECCeEcccc-------CCC---CeEEEEeccc
Confidence 3332 1 2222 23345577899999999994 5566899999999876532 112 6899999999
Q ss_pred CCCeeEEEEEEcccccceecceEEEEe
Q psy2441 180 EDQGKYECVAENEVGTEYSPSTMLYVK 206 (212)
Q Consensus 180 ~d~g~y~C~a~n~~g~~~~~~~~l~v~ 206 (212)
+|.|.|.|.|.|..|...+..+.|.|+
T Consensus 144 ~d~G~Y~C~a~n~~g~~~s~~~~l~V~ 170 (170)
T 3ry4_A 144 SHSGDYHCTGNIGYTLFSSKPVTITVQ 170 (170)
T ss_dssp GGCEEEEEEEEETTEEEECCCEEEEEC
T ss_pred cCCEEEEEEEEeCcCccccccEEEEEC
Confidence 999999999999998755554666654
No 62
>4fa8_A Secreted protein BARF1; immunoglobulin-like domains, 4-helix bundle fold, viral PROT cytokine complex; HET: NAG BMA; 2.20A {Human herpesvirus 4} PDB: 2ch8_A* 3uez_A* 4adf_A* 4adq_A*
Probab=99.91 E-value=4.8e-24 Score=147.04 Aligned_cols=154 Identities=12% Similarity=0.078 Sum_probs=103.7
Q ss_pred ccEEeeCCeEEEEcc---cCCCCCCcEEEEeCCEEecC---------------CCCC-----------eeEEeec--CCC
Q psy2441 38 TKVVEISHTTVLHCS---ASGNPPPKISWIREMLPVDT---------------SRNP-----------RYNLLTS--GAP 86 (212)
Q Consensus 38 ~~~v~~g~~v~l~C~---~~~~p~~~v~W~k~g~~l~~---------------~~~~-----------~~~~~~~--~~~ 86 (212)
++++.+|++++|.|. +.+.|.+.|+|||+|..+.. .... .+.+... .|.
T Consensus 2 ~Vta~~Ge~v~L~C~~~~v~~~p~~~V~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~ 81 (203)
T 4fa8_A 2 AVTAFLGERVTLTSYWRRVSLGPEIEVSWFKLGPGEEQVLIGRMHHDVIFIEWPFRGFFDIHRSANTFFLVVTAANISHD 81 (203)
T ss_dssp CCEEETTCCEEEEEECSSTTCSTTSEEEEEEEETTTEEEEEEEEETTEEEECGGGBTTEEEEEETTEEEEEESSCCGGGC
T ss_pred CeEEEcCCCEEEEeeeeccCCCCCcEEEEEEcCCCcceEEEEecCCceEEeeccccceEEEEEcCCEEEEEEccCCHHHC
Confidence 578899999999994 67789999999998632210 0001 1122221 388
Q ss_pred CeEEEeeeCCc------cceeEEeecCCCCCCCccccCCcceeEecCCcEEEEEeeeeCCCCceEEEeCCEEecCC--CC
Q psy2441 87 GTYIKIKPNLF------SPLSVYSADKIPPGFPQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREMLPVDTS--RN 158 (212)
Q Consensus 87 g~~l~i~~~~~------~~~~v~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~--~~ 158 (212)
|.|.|...+.. ..+.|.. +|.+...+....+.+|+.+.|.|.+.|.|.|.+.|++++..+... ..
T Consensus 82 G~Y~C~a~n~~g~~~~~~~l~V~~-------p~~~~~~~~~~~v~~g~~~~l~C~~~G~P~P~v~W~~~~~~~~~~~~~~ 154 (203)
T 4fa8_A 82 GNYLCRMKLGETEVTKQEHLSVVK-------PLTLSVHSERSQFPDFSVLTVTCTVNAFPHPHVQWLMPEGVEPAPTAAN 154 (203)
T ss_dssp EEEEEEEEETTEEEEEEEEEEEEE-------EEEEEEEEEECCSSCSCCEEEEEEEEEESCCEEEECCC-----------
T ss_pred eEEEEEEEcCCCcEEEEEEEEecC-------CceeeecceeEEEcCCCEEEEEEEcCCCCCCEEEEEECCeeecCccccc
Confidence 88888776622 2333332 255555566677888999999999999999999999877655432 24
Q ss_pred CceEEcCCCCceeEEEcCCCCCCCeeEEEEEEccccccee
Q psy2441 159 PRYNLLTSGAPGALQITNSIEEDQGKYECVAENEVGTEYS 198 (212)
Q Consensus 159 ~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~n~~g~~~~ 198 (212)
.++....++....+.+.++..+|.|.|+|.|.|..|.+..
T Consensus 155 ~r~~~~~~g~l~il~i~~v~~~D~G~YtC~A~N~~G~a~~ 194 (203)
T 4fa8_A 155 GGVMKEKDGSLSVAVDLSLPKPWHLPVTCVGKNDKEEAHG 194 (203)
T ss_dssp -CCEECTTSCEEEEEEEEECSSCCCCEEEEEESSSCEEEE
T ss_pred ceEEEeCCCCEEEEEECCCCHHHCEEEEEEEEcCCCEEEE
Confidence 5666666643345566789999999999999999998864
No 63
>3ojm_B Fibroblast growth factor receptor 2; beta trefoil motif, immunoglobulin-like domain, growth facto factor receptor, extracellular; 2.10A {Homo sapiens} PDB: 1nun_B* 3oj2_C 2fdb_P 1iil_E 1ev2_E 1e0o_B* 1ii4_E 1djs_A 3ojv_C* 1cvs_C 1fq9_C* 1evt_C
Probab=99.90 E-value=6.8e-23 Score=143.84 Aligned_cols=180 Identities=21% Similarity=0.340 Sum_probs=125.4
Q ss_pred CCCCeEEeCC----CccEEeeCCeEEEEcccCCCCCCcEEEEeCCEEecCCCC----------CeeEEeec--CCCCeEE
Q psy2441 27 PGFPQITEAP----STKVVEISHTTVLHCSASGNPPPKISWIREMLPVDTSRN----------PRYNLLTS--GAPGTYI 90 (212)
Q Consensus 27 ~~~p~~~~~~----~~~~v~~g~~v~l~C~~~~~p~~~v~W~k~g~~l~~~~~----------~~~~~~~~--~~~g~~l 90 (212)
..+|.|...+ ....+.+|+.+.|.|.+.+.|.+.+.|+|+|..+..... ..+.+... .|.|.|.
T Consensus 13 ~~~P~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~ 92 (231)
T 3ojm_B 13 KRAPYWTNTEKMEKRLHAVPAANTVKFRCPAGGNPMPTMRWLKNGKEFKQEHRIGGYKVRNQHWSLIMESVVPSDKGNYT 92 (231)
T ss_dssp CEEEEESCGGGGCCSCEEEETTSCEEEECCEEEESCCEEEEEETTEECCGGGSTTCCEEEGGGTEEEECSCCGGGCEEEE
T ss_pred ccCCccccccccCceeEEEccCCCEEEEEecccCCCCeEEEEECCccccccccccceeeecCcceEEEecCCcccCEEEE
Confidence 3456665444 678899999999999999989999999999998864311 12333332 4889999
Q ss_pred EeeeCC------ccceeEEeecCCCCCCCcccc-CCcceeEecCCcEEEEEeeeeCCCCceEEEe----CCEEecCCCCC
Q psy2441 91 KIKPNL------FSPLSVYSADKIPPGFPQITE-APSTKVVEISHTTVLHCSASGNPPPKISWIR----EMLPVDTSRNP 159 (212)
Q Consensus 91 ~i~~~~------~~~~~v~~~~~~~~~~p~~~~-~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~----~~~~~~~~~~~ 159 (212)
|..... ...+.|... +..+|.+.. .+....+..|+.+.|.|.+.+.|.+.+.|++ ++..+......
T Consensus 93 C~~~n~~~~~~~~~~l~V~~~---~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~g~~~~~~~~~ 169 (231)
T 3ojm_B 93 CVVENEYGSINHTYHLDVVER---SRHRPILQAGLPANASTVVGGDVEFVCKVYSDAQPHIQWIKHVEKNGSKYGPDGLP 169 (231)
T ss_dssp EEEEETTEEEEEEEEEEEECC---CCCCCEECTTCSCCEEEETTCCEEEECCEECSSCCEEEEEEECCBTTBSBCTTSCB
T ss_pred EEEecccCcccccEEEEEEcC---CCCCCceeeccCCceEEEeCCcEEEEEEEecCCCCEEEEEECCCCCCccccCCCcc
Confidence 987652 222333321 111233322 3455778899999999999999999999999 77666543222
Q ss_pred ceEEcC-----CCCceeEEEcCCCCCCCeeEEEEEEcccccceecceEEEEeccee
Q psy2441 160 RYNLLT-----SGAPGALQITNSIEEDQGKYECVAENEVGTEYSPSTMLYVKGTQV 210 (212)
Q Consensus 160 ~~~~~~-----~~~~~~l~i~~~~~~d~g~y~C~a~n~~g~~~~~~~~l~v~~~~~ 210 (212)
...... ......|.|.++..+|.|.|.|.|.|..|..... +.|.|...+.
T Consensus 170 ~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~-~~l~V~~~p~ 224 (231)
T 3ojm_B 170 YLKVLKHSGINSSNAEVLALFNVTEADAGEYICKVSNYIGQANQS-AWLTVLPKQQ 224 (231)
T ss_dssp CEEEEEECSTTCSCTTEEEECSCCGGGCEEEEEEEEETTEEEEEE-EEEEEECCC-
T ss_pred eEeEecccccccCCccEEEEecCCHHHCeEEEEEEEeccceEeeE-EEEEEecCCC
Confidence 221111 1113679999999999999999999999998777 8888877654
No 64
>4dep_C Interleukin-1 receptor accessory protein; B-trefoil, immunoglobulin, immune system, extracellular; HET: NAG; 3.10A {Homo sapiens} PDB: 3o4o_B*
Probab=99.90 E-value=5e-24 Score=158.65 Aligned_cols=203 Identities=15% Similarity=0.137 Sum_probs=106.0
Q ss_pred ceeeEEEeeccCCCcceecccccCCCCCeEE----eCCCccEEeeCCeEEEEccc-----CCCCCCcEEEEeCCEEecCC
Q psy2441 3 IGTYIKIKPNLFSPLSVYSADKIPPGFPQIT----EAPSTKVVEISHTTVLHCSA-----SGNPPPKISWIREMLPVDTS 73 (212)
Q Consensus 3 ~g~Y~C~~~~~~~~~~~~~~~~~~~~~p~~~----~~~~~~~v~~g~~v~l~C~~-----~~~p~~~v~W~k~g~~l~~~ 73 (212)
+|.|+|.+.|..+..... ..+.+..+|.+. ..+....+.+|+.+.|.|.+ .+.|.+.+.|+|+|.++...
T Consensus 91 ~G~Y~C~a~n~~~~~~~~-~~l~V~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~g~p~~~v~W~k~~~~l~~~ 169 (349)
T 4dep_C 91 TGNYTCMLRNTTYCSKVA-FPLEVVQKDSCFNSPMKLPVHKLYIEYGIQRITCPNVDGYFPSSVKPTITWYMGCYKIQNF 169 (349)
T ss_dssp CEEEEEEEECSSCEEEEE-EEEEEECCCTTSCCSCCCCEEEEETTCSEEEEECCSCTTSSCTTSCCEEEEEETTEECCSC
T ss_pred CEEEEEEEecCCceEEEE-EEEEEecCCcccCcccccCcceeeecCccEEEEcCCCcccccCCCCceEEEeeCCEECCCc
Confidence 599999999987654433 233332222211 22345577889999999985 67889999999999988653
Q ss_pred C-----CCeeEEeec--CCCCeEEEeeeCC--------ccceeEEeecCC-CCCCCccccCCcc--eeEecCCcEEEEEe
Q psy2441 74 R-----NPRYNLLTS--GAPGTYIKIKPNL--------FSPLSVYSADKI-PPGFPQITEAPST--KVVEISHTTVLHCS 135 (212)
Q Consensus 74 ~-----~~~~~~~~~--~~~g~~l~i~~~~--------~~~~~v~~~~~~-~~~~p~~~~~~~~--~~~~~g~~~~l~C~ 135 (212)
. ...+.+... +|.|.|.|...+. ...+.+...... ...+|.+...... ..+.+|+.+.|.|.
T Consensus 170 ~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~~g~~~~~~~~~~l~v~~~~~~~~~p~i~~~~~~~~~~v~~G~~v~l~C~ 249 (349)
T 4dep_C 170 NNVIPEGMNLSFLIALISNNGNYTCVVTYPENGRTFHLTRTLTVKVVGSPKNAVPPVIHSPNDHVVYEKEPGEELLIPCT 249 (349)
T ss_dssp SSEEEETTEEEEESCCGGGCEEEEEEEEEEETTEEEEEEEEEEEEEECCGGGCCSCEEC----------------CCCEE
T ss_pred cceeecCCEEEEeeeeecCCcEEEEEEEEeeCCEEEEEEEEEEEEEEccCCCCCCCeEecCCCceeEEEecCCcEEEEEE
Confidence 1 123444433 4889999987662 122222221100 0113555544433 26788999999999
Q ss_pred ee----eCCCCceEEEeCCEEecCC-CCCceE----EcCCC---CceeEEEcCCCCCCC-eeEEEEEEcccccceecceE
Q psy2441 136 AS----GNPPPKISWIREMLPVDTS-RNPRYN----LLTSG---APGALQITNSIEEDQ-GKYECVAENEVGTEYSPSTM 202 (212)
Q Consensus 136 ~~----~~p~~~i~W~~~~~~~~~~-~~~~~~----~~~~~---~~~~l~i~~~~~~d~-g~y~C~a~n~~g~~~~~~~~ 202 (212)
+. +.|.|.+.|++++..+... ...++. ..... ....|.|.++..+|. |.|.|.|.|..|..... +.
T Consensus 250 ~~~~~~g~p~p~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~~G~Y~C~a~N~~G~~~~~-~~ 328 (349)
T 4dep_C 250 VYFSFLMDSRNEVWWTIDGKKPDDITIDVTINESISHSRTEDETRTQILSIKKVTSEDLKRSYVCHARSAKGEVAKA-AK 328 (349)
T ss_dssp EEECCCTTCCCEEEEESSCC--------CCCCEEEECCTTCCEEEEECC-------------CEEEEECSSCEEEEE-CC
T ss_pred EEEccCCCCCCEEEEEECCEEccccCCccccccceeeecCCCcEEEEEEEEeeccHHHcCCcEEEEEEcCCCcEEEE-EE
Confidence 98 5688999999999887652 111110 01111 124699999999999 99999999999999887 88
Q ss_pred EEEec
Q psy2441 203 LYVKG 207 (212)
Q Consensus 203 l~v~~ 207 (212)
|.|++
T Consensus 329 l~v~~ 333 (349)
T 4dep_C 329 VKQKV 333 (349)
T ss_dssp -----
T ss_pred Eeeec
Confidence 88876
No 65
>3kld_A Contactin 4, axcam, BIG-2; cell adhesion, protein complex, receptor protein tyrosine phosphatase; HET: NAG; 2.00A {Mus musculus} PDB: 3jxa_A*
Probab=99.90 E-value=6.3e-23 Score=154.73 Aligned_cols=200 Identities=27% Similarity=0.348 Sum_probs=130.6
Q ss_pred ceeeEEEeeccCCCcceecccccCCCCCeEE-eCCCccEEeeCCeEEEEcccC-CCCCCcEEEEeCCEEecCCC------
Q psy2441 3 IGTYIKIKPNLFSPLSVYSADKIPPGFPQIT-EAPSTKVVEISHTTVLHCSAS-GNPPPKISWIREMLPVDTSR------ 74 (212)
Q Consensus 3 ~g~Y~C~~~~~~~~~~~~~~~~~~~~~p~~~-~~~~~~~v~~g~~v~l~C~~~-~~p~~~v~W~k~g~~l~~~~------ 74 (212)
+|.|+|.|.|..|........+.+...+.+. .......+.+|+.+.|.|... +.|.+.+.|++++.++....
T Consensus 75 ~G~Y~C~A~N~~G~~~s~~~~l~v~~~~~~~~~~~~~~~v~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~ 154 (384)
T 3kld_A 75 AGTYQCIATNSFGTIVSREAKLQFAYLENFKTRTRSTVSVRRGQGMVLLCGPPPHSGELSYAWIFNEYPSYQDNRRFVSQ 154 (384)
T ss_dssp CEEEEEEEEETTEEEECCCEEEEEEEECCCSCCCCCCEEEEETCCEEECCCCCSEESCEEEEEEETTEECCCSSSEEECT
T ss_pred CEEEEEEEEcCcccEEecceEEEEecccccccCCCCceeEEcCCCeEEecCCCCCCCCeEEEEEECCCCCEeeccEEEEc
Confidence 5999999999887644333333332222222 233457889999999999874 45678899999998764321
Q ss_pred -CCeeEEeec--CCCCeEEEeeeCCcccee---------EEeecCCCCCCCccc-cCCcceeEecCCcEEEEEeeeeCCC
Q psy2441 75 -NPRYNLLTS--GAPGTYIKIKPNLFSPLS---------VYSADKIPPGFPQIT-EAPSTKVVEISHTTVLHCSASGNPP 141 (212)
Q Consensus 75 -~~~~~~~~~--~~~g~~l~i~~~~~~~~~---------v~~~~~~~~~~p~~~-~~~~~~~~~~g~~~~l~C~~~~~p~ 141 (212)
...+.+... .|.|.|.|...+...... +..........|.+. ..+....+.+|+.+.|.|.+.+.|.
T Consensus 155 ~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~~~~~v~~~~~~~~~~p~~~~~~~~~~~~~~G~~v~l~C~~~g~P~ 234 (384)
T 3kld_A 155 ETGNLYIAKVEKSDVGNYTCVVTNTVTNHKVLGPPTPLILRNDGVMGEYEPKIEVQFPETVPAEKGTTVKLECFALGNPV 234 (384)
T ss_dssp TTCCEEESSCCGGGCEEEEEEEEETTTTEEEECCCEEEEEEEEEECCCEEEEEEEECCSEEEEETTSCEEEEEEEEEESC
T ss_pred CCCcEEEeecCHHHCceEEEEEecccccceeeCCceEEEEccCCcccccCCceeecCCCceEecCCCcEEEEEEEeecCC
Confidence 122333332 388899998776332221 111000000012222 2344566888999999999999999
Q ss_pred CceEEEeCC-EEecCCCCCceEEcCCCCceeEEEcCCCCCCCeeEEEEEEcccccceecceEEEEecce
Q psy2441 142 PKISWIREM-LPVDTSRNPRYNLLTSGAPGALQITNSIEEDQGKYECVAENEVGTEYSPSTMLYVKGTQ 209 (212)
Q Consensus 142 ~~i~W~~~~-~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~n~~g~~~~~~~~l~v~~~~ 209 (212)
|.+.|++++ ..+... . ..... .+.|.|.++..+|+|.|.|.|.|..|..... ..|.|...+
T Consensus 235 p~i~W~k~~~~~~~~~--~--~~~~~--~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~-~~l~v~~~P 296 (384)
T 3kld_A 235 PTILWRRADGKPIARK--A--RRHKS--NGILEIPNFQQEDAGSYECVAENSRGKNVAK-GQLTFYAQP 296 (384)
T ss_dssp CEEEEEETTCCCCCTT--C--EECTT--SCEEEECSCCGGGCEEEEEEEEETTEEEEEE-EEEEEEEEE
T ss_pred CcEEEEeCCCcccccc--c--eecCC--CcEEEECCCChhhCEEEEEEEEcCCCeEEEE-EEEEEecCC
Confidence 999999954 344321 1 12222 2689999999999999999999999988777 777776543
No 66
>3s97_C Contactin-1; carbonic anhdyrase like immunoglobulin, cell adhesion comple adhesion; HET: NAG; 2.30A {Homo sapiens}
Probab=99.90 E-value=8.7e-23 Score=140.34 Aligned_cols=167 Identities=25% Similarity=0.380 Sum_probs=119.0
Q ss_pred eCCCccEEeeCCeEEEEcc-cCCCCC-CcEEEEeCCEEecCCC---------CCeeEEeec--CCCCeEEEeeeCCccc-
Q psy2441 34 EAPSTKVVEISHTTVLHCS-ASGNPP-PKISWIREMLPVDTSR---------NPRYNLLTS--GAPGTYIKIKPNLFSP- 99 (212)
Q Consensus 34 ~~~~~~~v~~g~~v~l~C~-~~~~p~-~~v~W~k~g~~l~~~~---------~~~~~~~~~--~~~g~~l~i~~~~~~~- 99 (212)
..+....+.+|+.+.|.|. +.+.|. +.+.|+|++..+.... ...+.+... +|.|.|.|........
T Consensus 13 ~~~~~~~v~~G~~v~L~C~~~~~~p~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~~~ 92 (201)
T 3s97_C 13 EERPEVRVKEGKGMVLLCDPPYHFPDDLSYRWLLNEFPVFITMDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSITK 92 (201)
T ss_dssp SCCCCEEEETTCCEEECCCCCSEESSCCEEEEEESSTTCBCCCSSSEEECTTTCCEEESSCCGGGCEEEEEEEEEGGGTE
T ss_pred CCCceEEEECCCCEEEeccccccCCCceEEEEEECCceeeeeeCCCeEEEcCCCeEEECcCCcccCeEEEEEEEecCCCc
Confidence 4456788999999999999 888888 8999999987664211 122333332 4888999987762211
Q ss_pred ------eeEEee--cCCCCCCCccccCCcceeEecCCcEEEEEeeeeCCCCceEEEeCCEEecCCCCCceEEcCCCCcee
Q psy2441 100 ------LSVYSA--DKIPPGFPQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREMLPVDTSRNPRYNLLTSGAPGA 171 (212)
Q Consensus 100 ------~~v~~~--~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (212)
+.+... ......+|.+...+....+..|+.+.|.|.+.+.|.+.+.|++++..+... .+ ....+ ..
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~~~~~~~~--~~--~~~~~--~~ 166 (201)
T 3s97_C 93 SVFSKFIPLIPIPERTTKPYPADIVVQFKDVYALMGQNVTLECFALGNPVPDIRWRKVLEPMPST--AE--ISTSG--AV 166 (201)
T ss_dssp EEECCCEEEEEECCSSCCCEEEEEEEECCCEEEETTCCEEEEEEEEEESCCEEEEEETTBCCCTT--CE--EETTT--TE
T ss_pred chhhcccceeeccccccCCCCCceEecCCceEEecCCcEEEEEEccCCCCCceEEEeCCCcCCCc--ee--ecCCC--CE
Confidence 111111 111112244544445677889999999999999999999999999866542 22 22222 68
Q ss_pred EEEcCCCCCCCeeEEEEEEcccccceecceEEEEec
Q psy2441 172 LQITNSIEEDQGKYECVAENEVGTEYSPSTMLYVKG 207 (212)
Q Consensus 172 l~i~~~~~~d~g~y~C~a~n~~g~~~~~~~~l~v~~ 207 (212)
|.|.++..+|.|.|+|.|.|..|..... +.|.|++
T Consensus 167 L~i~~v~~~d~G~Y~C~a~n~~g~~~~~-~~l~V~a 201 (201)
T 3s97_C 167 LKIFNIQLEDEGIYECEAENIRGKDKHQ-ARIYVQA 201 (201)
T ss_dssp EEECSCCGGGCEEEEEEEEETTEEEEEE-EEEEEEC
T ss_pred EEEccCChhhCEEEEEEEEecCCceeee-EEEEEeC
Confidence 9999999999999999999999998777 8887763
No 67
>3rjd_A High affinity immunoglobulin gamma FC receptor I; immune system; HET: NAG MAN FUC P33; 2.65A {Homo sapiens}
Probab=99.90 E-value=3.2e-22 Score=143.01 Aligned_cols=187 Identities=19% Similarity=0.125 Sum_probs=127.5
Q ss_pred ceeeEEEeeccCCCcceecccccCCCCCeEEeCCCccEEeeCCeEEEEccc-CCCCCCcEEEEeCCEEecCCC-CCeeEE
Q psy2441 3 IGTYIKIKPNLFSPLSVYSADKIPPGFPQITEAPSTKVVEISHTTVLHCSA-SGNPPPKISWIREMLPVDTSR-NPRYNL 80 (212)
Q Consensus 3 ~g~Y~C~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~-~~~p~~~v~W~k~g~~l~~~~-~~~~~~ 80 (212)
+|.|+|.+.|..+... ..+.+..++ +...+....+.+|+.+.|.|.+ .+.|.+.+.|+|+|..+.... ...+.+
T Consensus 60 ~G~Y~C~~~~~~~s~~---~~l~v~~~~-~~~~~~~~~~~~g~~v~l~C~~~~~~p~~~v~W~~~g~~~~~~~~~~~l~i 135 (262)
T 3rjd_A 60 SGEYRCQRGLSGRSDP---IQLEIHRGW-LLLQVSSRVFTEGEPLALRCHAWKDKLVYNVLYYRNGKAFKFFHWNSNLTI 135 (262)
T ss_dssp CEEEEEEESSSCCCCC---EEEEEECSS-EEEEESCSEEETTSCEEEEEEEGGGCCCEEEEEEETTEEEEEEEECCCEEE
T ss_pred CeEEEEEEecCCcccc---EEEEEeccc-eEecCCCeEEecCCeEEEEEEccCCCCCceEEEEECCccccccCCCCeEEE
Confidence 6999999988655432 223333344 3445556778899999999999 678888999999998875431 234444
Q ss_pred eec--CCCCeEEEeeeCCcc----ceeEEeecCCCCCCCccccCCcceeEecCCcEEEEEeeeeCCC-Cc----eEEEeC
Q psy2441 81 LTS--GAPGTYIKIKPNLFS----PLSVYSADKIPPGFPQITEAPSTKVVEISHTTVLHCSASGNPP-PK----ISWIRE 149 (212)
Q Consensus 81 ~~~--~~~g~~l~i~~~~~~----~~~v~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~-~~----i~W~~~ 149 (212)
... +|.|.|.|....... .+.+.... ...+|.+...+ ...+.+|+.+.|.|.+.+.|. |. +.|+++
T Consensus 136 ~~~~~~d~G~Y~C~~~n~~~~~~~~~~l~V~~--~~~~p~~~~~~-~~~~~~g~~~~l~C~~~~~p~~p~~~~~~~w~~~ 212 (262)
T 3rjd_A 136 LKTNISHNGTYHCSGMGKHRYTSAGISVTVKE--LFPAPVLNASV-TSPLLEGNLVTLSCETKLLLQRPGLQLYFSFYMG 212 (262)
T ss_dssp SSCCGGGCEEEEEEEESSSEEEEECEEEEEEC--SSCCCEEEESS-CSSEETTCCEEEEEECCCCCC-----EEEEEEET
T ss_pred EECChhhCEEEEEEEeCCCCccccceEEEecc--CCCCCeEeecC-ceeecCCCeEEEEeEcccCCCCCCccEEEEEEeC
Confidence 433 488999998877322 12222221 11225554444 455788999999999999876 53 678999
Q ss_pred CEEecCCCCCceEEcCCCCceeEEEcCCCCCCCeeEEEEEEcccccceecceEEEEe
Q psy2441 150 MLPVDTSRNPRYNLLTSGAPGALQITNSIEEDQGKYECVAENEVGTEYSPSTMLYVK 206 (212)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~n~~g~~~~~~~~l~v~ 206 (212)
+..+... ... ..|.|.++..+|+|.|.|.|.|..|.....+..+.|+
T Consensus 213 ~~~~~~~-------~~~---~~L~i~~v~~~d~G~Y~C~a~n~~G~~~~~s~~~~l~ 259 (262)
T 3rjd_A 213 SKTLRGR-------NTS---SEYQILTARREDSGLYWCEAATEDGNVLKRSPELELQ 259 (262)
T ss_dssp TEEEEEE-------ESC---CEEEESSCCGGGCEEEEEEEEETTSSCEEECCCEEEC
T ss_pred CcEeccc-------CCC---ceEEEEEechhhCeEEEEEEEcccCceEEecCCeEEE
Confidence 9877642 112 6899999999999999999999999764432444444
No 68
>1bih_A Hemolin; insect immunity, LPS-binding, homophilic adhesion; 3.10A {Hyalophora cecropia} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.90 E-value=5e-23 Score=155.53 Aligned_cols=202 Identities=17% Similarity=0.209 Sum_probs=131.8
Q ss_pred ceeeEEEeeccCCCcceecccccC--CCCCeEEeCCCccEEeeCCeEEEEccc-CCCCCCcEEEEeCC---EEecC----
Q psy2441 3 IGTYIKIKPNLFSPLSVYSADKIP--PGFPQITEAPSTKVVEISHTTVLHCSA-SGNPPPKISWIREM---LPVDT---- 72 (212)
Q Consensus 3 ~g~Y~C~~~~~~~~~~~~~~~~~~--~~~p~~~~~~~~~~v~~g~~v~l~C~~-~~~p~~~v~W~k~g---~~l~~---- 72 (212)
+|.|+|.+.|..+........+.+ ...|.+ .+....+.+|+.+.|.|.+ .+.|.+.+.|+|++ .+...
T Consensus 74 ~G~Y~C~a~n~~g~~~s~~~~l~v~~~~~p~~--~~~~~~~~~G~~v~l~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~ 151 (395)
T 1bih_A 74 EGHYQCFAETPAGVASSRVISFRKTYLIASPA--KTHEKTPIEGRPFQLDCVLPNAYPKPLITWKKRLSGADPNADVTDF 151 (395)
T ss_dssp CEEEEEEEEETTEEEECCCEEEEEEEEECCCC--EEEEECCBTTEEEEECCCCCEEESCCEEEEEEEETTSCGGGCCCCC
T ss_pred CcEEEEEEEeCCCeEEeEEEEEEEEEeecCCc--CCcceeeeeCCcEEEEecCCCCCCCCeEEEEecCCCcCcccccccc
Confidence 589999999977654322222222 122333 3345667799999999996 77899999999986 22110
Q ss_pred ------CCCCeeEEeec--CCCC---eEEEeeeCCccc----eeEEeecCCCC--------CCCccccCCcceeEecCCc
Q psy2441 73 ------SRNPRYNLLTS--GAPG---TYIKIKPNLFSP----LSVYSADKIPP--------GFPQITEAPSTKVVEISHT 129 (212)
Q Consensus 73 ------~~~~~~~~~~~--~~~g---~~l~i~~~~~~~----~~v~~~~~~~~--------~~p~~~~~~~~~~~~~g~~ 129 (212)
..+..+.+... .|.| .|.|........ +.......... ..|.+ .+....+.+|+.
T Consensus 152 ~~~~~~~~~~~L~i~~v~~~d~G~~~~Y~C~a~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~--~~~~~~~~~G~~ 229 (395)
T 1bih_A 152 DRRITAGPDGNLYFTIVTKEDVSDIYKYVCTAKNAAVDEEVVLVEYEIKGVTKDNSGYKGEPVPQY--VSKDMMAKAGDV 229 (395)
T ss_dssp CTTEEECTTSCEEEEEECGGGCCSSEEEEEEEECTTCSSCEEEEEEEECCCBCCSSCCCCCCEEEE--ECCSEEEETTSC
T ss_pred cccEEEcCCCcEEEEEEeeccCCCceEEEEEEEecccceEEEeeeEEecccccccccccCCcCcee--cCCceEEECCCc
Confidence 01123333332 4778 899988773322 11211111110 01222 234567889999
Q ss_pred EEEEEeeeeCCCCceEEEeCCEEecCCCCCceEEcCCCCceeEEEcCCCCCCCeeEEEEEEcccccceecceEEEEecc
Q psy2441 130 TVLHCSASGNPPPKISWIREMLPVDTSRNPRYNLLTSGAPGALQITNSIEEDQGKYECVAENEVGTEYSPSTMLYVKGT 208 (212)
Q Consensus 130 ~~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~n~~g~~~~~~~~l~v~~~ 208 (212)
+.|.|.+.+.|.+.+.|++++..+......++..........|.|.++..+|.|.|.|.|.|..|......+.|.|...
T Consensus 230 v~l~C~~~g~p~~~i~W~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~l~V~~~ 308 (395)
T 1bih_A 230 TMIYCMYGSNPMGYPNYFKNGKDVNGNPEDRITRHNRTSGKRLLFKTTLPEDEGVYTCEVDNGVGKPQKHSLKLTVVSA 308 (395)
T ss_dssp EEEEEEEECSSCCCCEEEETTEECCCCTTSSEESCSSSTTSEEEESSCCGGGCEEEEEEECCSSSSCEEEEEEEEEEEE
T ss_pred EEEEEEeccCCCCeEEEEECCEEcCCCCceeEEEEecCCCceEEEccCChhhCEEEEEEEEeCCCCceEEEEEEEEEcC
Confidence 9999999999999999999998887643334433222222589999999999999999999999987663377777654
No 69
>3grw_A Fibroblast growth factor receptor 3; FGFR3, protein-protein complex, receptor tyrosine kinas binding, immunoglobulin domain, kinase, membrane, nucleotid binding; HET: NAG; 2.10A {Homo sapiens}
Probab=99.90 E-value=3.2e-22 Score=141.46 Aligned_cols=181 Identities=24% Similarity=0.419 Sum_probs=120.7
Q ss_pred CCCCeEEeC----CCccEEeeCCeEEEEcccCCCCCCcEEEEeCCEEecCCC----------CCeeEEeec--CCCCeEE
Q psy2441 27 PGFPQITEA----PSTKVVEISHTTVLHCSASGNPPPKISWIREMLPVDTSR----------NPRYNLLTS--GAPGTYI 90 (212)
Q Consensus 27 ~~~p~~~~~----~~~~~v~~g~~v~l~C~~~~~p~~~v~W~k~g~~l~~~~----------~~~~~~~~~--~~~g~~l 90 (212)
..+|.|... +....+.+|+.+.|.|.+.+.|.+.+.|+|+|..+.... ...+.+... .|.|.|.
T Consensus 9 ~~~P~~~~p~~~~~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~ 88 (241)
T 3grw_A 9 TGAPYWTRPERMDKKLLAVPAANTVRFRCPAAGNPTPSISWLKNGREFRGEHRIGGIKLRHQQWSLVMESVVPSDRGNYT 88 (241)
T ss_dssp --CCEESSGGGGSCCEEEEETTSEEEEECCEECSSCCEEEEEETTEECCGGGSTTCCEEEGGGTEEEECSCCGGGCEEEE
T ss_pred CCCceeEcCCCCCCcceEEcCCCeEEEEEEecCCCCceeEEEECCcccCCCCcccceeeeccceEEEEEeCCcccCEEEE
Confidence 356666533 346788999999999999999999999999998876431 112333322 4888999
Q ss_pred EeeeCC------ccceeEEeecCCCCCCCccc-cCCcceeEecCCcEEEEEeeeeCCCCceEEEe----CCEEecCCCCC
Q psy2441 91 KIKPNL------FSPLSVYSADKIPPGFPQIT-EAPSTKVVEISHTTVLHCSASGNPPPKISWIR----EMLPVDTSRNP 159 (212)
Q Consensus 91 ~i~~~~------~~~~~v~~~~~~~~~~p~~~-~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~----~~~~~~~~~~~ 159 (212)
|..... ...+.|... ++.+|.+. ..+....+.+|+.+.|.|.+.+.|.+.+.|++ ++..+......
T Consensus 89 C~~~~~~~~~~~~~~l~V~~~---~~~~~~~~~~~~~~~~~~~g~~v~L~C~~~~~p~p~v~W~~~~~~~g~~~~~~~~~ 165 (241)
T 3grw_A 89 CVVENKFGSIRQTYTLDVLER---SPHRPILQAGLPANQTAVLGSDVEFHCKVYSDAQPHIQWLKHVEVNGSKVGPDGTP 165 (241)
T ss_dssp EEEEETTEEEEEEEEEEEECC---CCCCCEEEECTTCSEECCTTCCEEEEEEEECSSCCEEEEEEECCSSSCSSCTTTCC
T ss_pred EEEeecCCceEEEEEEEEecc---CCCCceeecCCCccceecCCCEEEEEEEEecCCCCEEEEEEcccCCCcccCCCCce
Confidence 987652 122333221 11123222 23455678889999999999999999999999 77666544222
Q ss_pred ceEEc------CCCCceeEEEcCCCCCCCeeEEEEEEcccccceecceEEEEecceec
Q psy2441 160 RYNLL------TSGAPGALQITNSIEEDQGKYECVAENEVGTEYSPSTMLYVKGTQVD 211 (212)
Q Consensus 160 ~~~~~------~~~~~~~l~i~~~~~~d~g~y~C~a~n~~g~~~~~~~~l~v~~~~~p 211 (212)
..... .......|.|.++..+|.|.|.|.|.|..|..... +.|.|++++.|
T Consensus 166 ~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~g~~~~~-~~l~V~~~p~~ 222 (241)
T 3grw_A 166 YVTVLKSWISESVEADVRLRLANVSERDGGEYLCRATNFIGVAEKA-FWLSVHGPRAA 222 (241)
T ss_dssp CEEEEEEEECSBSEEEEEEEECSCCGGGCEEEEEEEECSSCEEEEE-EEEEC------
T ss_pred eeeeeeEeeeeecCCceEEEECcCCcccCcEEEEEEecCcceEEEE-EEEEecCCCCC
Confidence 21110 01113689999999999999999999999999777 88888776543
No 70
>1f97_A Junction adhesion molecule; immunoglobulin superfamily, beta-sandwich fold, cell adhesion; 2.50A {Mus musculus} SCOP: b.1.1.1 b.1.1.4
Probab=99.90 E-value=1e-22 Score=141.17 Aligned_cols=175 Identities=21% Similarity=0.358 Sum_probs=118.7
Q ss_pred CCeEEeCCCccEEeeCCeEEEEcccCCCCCCcEEEEeCCEEec----------CCCCCe-------eEEeec--CCCCeE
Q psy2441 29 FPQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREMLPVD----------TSRNPR-------YNLLTS--GAPGTY 89 (212)
Q Consensus 29 ~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~k~g~~l~----------~~~~~~-------~~~~~~--~~~g~~ 89 (212)
|+.+...+....+.+|+.+.|.|.+.+.|.+.+.|+|++..+. .....+ +.+... +|.|.|
T Consensus 1 ~~~v~~~~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~L~i~~v~~~D~G~Y 80 (212)
T 1f97_A 1 KGSVYTAQSDVQVPENESIKLTCTYSGFSSPRVEWKFVQGSTTALVCYNSQITAPYADRVTFSSSGITFSSVTRKDNGEY 80 (212)
T ss_dssp CCEEECSCSEEEEETTCCEEEECEEESCSSEEEEEEEEETTEEEEEEETTEECGGGTTTEEEETTEEEESCCCGGGCEEE
T ss_pred CceEEecCCCeEEEcCCCEEEEeEeCCCCCcEEEEEECCCceeeEEecCCcccccccCcEEeeceeEEEcccCcccCeEE
Confidence 3566777888899999999999999988999999999875521 111122 233322 488899
Q ss_pred EEeeeCC----ccceeEEeecCCCCCCCccccCCcceeEecCCcEEEEEe-eeeCCCCceEEEeCCE-EecCCCC-----
Q psy2441 90 IKIKPNL----FSPLSVYSADKIPPGFPQITEAPSTKVVEISHTTVLHCS-ASGNPPPKISWIREML-PVDTSRN----- 158 (212)
Q Consensus 90 l~i~~~~----~~~~~v~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~-~~~~p~~~i~W~~~~~-~~~~~~~----- 158 (212)
.|..... .....+......+ |.+...+....+.+|+.+.|.|. +.+.|.+.+.|++++. .+.....
T Consensus 81 ~C~~~~~~g~~~~~~~~~l~V~~~---p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~i~W~~~~~~~l~~~~~~~~~~ 157 (212)
T 1f97_A 81 TCMVSEEGGQNYGEVSIHLTVLVP---PSKPTISVPSSVTIGNRAVLTCSEHDGSPPSEYSWFKDGISMLTADAKKTRAF 157 (212)
T ss_dssp EEEEEETTSSSEEEEEEEEEEEBC---CCCCEEECCSEEETTSCEEEEEECSCCBSCCEEEEEETTEESBC-----CBSC
T ss_pred EEEEEccCCCcccEEEEEEEEEcC---CCCcccCCccccCCCCeEEEEEEcccCcCCCEEEEEeCCcccccccccccccc
Confidence 9977652 1122222222222 33333333456788999999999 7999999999999998 7765411
Q ss_pred --CceEEcCCCCceeEEEcCCCCCCCeeEEEEEEcccccc-eecceEEEEecc
Q psy2441 159 --PRYNLLTSGAPGALQITNSIEEDQGKYECVAENEVGTE-YSPSTMLYVKGT 208 (212)
Q Consensus 159 --~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~n~~g~~-~~~~~~l~v~~~ 208 (212)
.++..... ...|.|.++..+|.|.|.|.|.|..|.. .+..+.|.|++.
T Consensus 158 ~~~~~~~~~~--~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~s~~~~l~V~~~ 208 (212)
T 1f97_A 158 MNSSFTIDPK--SGDLIFDPVTAFDSGEYYCQAQNGYGTAMRSEAAHMDAVEL 208 (212)
T ss_dssp SSSCEEECTT--TCCEEESSCCGGGCEEEEEEEECSSSCCEECCCEEEEEESS
T ss_pred cCceeEecCC--CceEEEEecChhhCcEEEEEEccccCCccccceEEEEEEEe
Confidence 12223222 3789999999999999999999999988 233366666543
No 71
>3u83_A Poliovirus receptor-related protein 1; nectin-1, hinge region plasiticity, cell adhesion; HET: PG6; 2.50A {Homo sapiens} PDB: 3alp_A* 3u82_B 4fmf_A* 3sku_E* 2l7j_A
Probab=99.90 E-value=5.4e-23 Score=151.92 Aligned_cols=191 Identities=17% Similarity=0.185 Sum_probs=129.9
Q ss_pred ceeeEEEeeccCCCcceecccccCCCCCeEE--eCCCccEEeeC---CeEEEEcc-cCCCCCCcEEEEeCC--EEec---
Q psy2441 3 IGTYIKIKPNLFSPLSVYSADKIPPGFPQIT--EAPSTKVVEIS---HTTVLHCS-ASGNPPPKISWIREM--LPVD--- 71 (212)
Q Consensus 3 ~g~Y~C~~~~~~~~~~~~~~~~~~~~~p~~~--~~~~~~~v~~g---~~v~l~C~-~~~~p~~~v~W~k~g--~~l~--- 71 (212)
+|.|+|.+.+...........+.+..+|.+. ..+....+.+| +.+.|.|. +.+.|.+.+.|+|++ ....
T Consensus 104 ~G~Y~C~~~~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~~~g~~~~~~~l~C~~~~~~p~~~i~W~~~~~~~~~~~~~ 183 (331)
T 3u83_A 104 EGVYICEFATFPTGNRESQLNLTVMAKPTNWIEGTQAVLRAKKGQDDKVLVATCTSANGKPPSVVSWETRLKGEAEYQEI 183 (331)
T ss_dssp CEEEEEEEEEETTEEEEEEEEEEEEBCCEEEEEECSSCEEECTTCCCCEEEEEEEEEEEBSCCEEEEEESSCCEEEEEEE
T ss_pred CcEEEEEEEecCCCccEEEEEEEEecCCcceeecCCCceeecCCCccceEEEEEEecCCcCCceEEEEcCCCCcccccee
Confidence 6999999544332223333445555677664 35667788888 77999998 788899999999953 2211
Q ss_pred CCCCCeeEEe--------ecCCCCeEEEeeeCC------ccceeEEeecCCCCCCCcccc-CCcceeEecCCcEEEEEee
Q psy2441 72 TSRNPRYNLL--------TSGAPGTYIKIKPNL------FSPLSVYSADKIPPGFPQITE-APSTKVVEISHTTVLHCSA 136 (212)
Q Consensus 72 ~~~~~~~~~~--------~~~~~g~~l~i~~~~------~~~~~v~~~~~~~~~~p~~~~-~~~~~~~~~g~~~~l~C~~ 136 (212)
......+.+. ..+|.|.|.|..... ...+.|... |.+.. .+....+.+|+.+.|.|.+
T Consensus 184 ~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~l~V~~~-------P~~~~~~~~~~~~~~g~~~~l~C~~ 256 (331)
T 3u83_A 184 RNPNGTVTVISRYRLVPSREAHQQSLACIVNYHMDRFKESLTLNVQYE-------PEVTIEGFDGNWYLQRMDVKLTCKA 256 (331)
T ss_dssp ECTTSCEEEEEEEEECCCGGGTTCEEEEEEEETTEEEEEEEECCEEEE-------EEEEEECCCSCCBTTCCCEEEEEEE
T ss_pred ECCCCcEEEEEEEEEEeccccCCCEEEEEEecCCCcceeeEEEEEecC-------CeEEEecCCCceEeCCCeEEEEEeC
Confidence 0011222221 224889999988763 223333322 44432 2333457789999999999
Q ss_pred eeCCCCc-eEEEeCCEEecCCCCCceEEcCCCCceeEEEc-CCCCCCCeeEEEEEEcccccceecceEEEEecce
Q psy2441 137 SGNPPPK-ISWIREMLPVDTSRNPRYNLLTSGAPGALQIT-NSIEEDQGKYECVAENEVGTEYSPSTMLYVKGTQ 209 (212)
Q Consensus 137 ~~~p~~~-i~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~-~~~~~d~g~y~C~a~n~~g~~~~~~~~l~v~~~~ 209 (212)
.++|.|. +.|++++..+... . ...+ ..|.|. ++..+|.|.|.|.|.|..|..... +.|.|+...
T Consensus 257 ~g~p~p~~i~W~~~~~~~~~~----~-~~~~---~~L~i~~~v~~~d~G~Y~C~a~N~~G~~~~~-~~l~V~~~~ 322 (331)
T 3u83_A 257 DANPPATEYHWTTLNGSLPKG----V-EAQN---RTLFFKGPINYSLAGTYICEATNPIGTRSGQ-VEVNITEAA 322 (331)
T ss_dssp EEESCCCEEEEEETTBSCCTT----E-EEET---TEEEECSCCCGGGCEEEEEEEEETTEEEEEE-EEECCBC--
T ss_pred cCCCCCCEEEEEECCCccccc----c-eecC---cEEEEeCCCccccCeEEEEEEEeccccceEE-EEEEEeccc
Confidence 9999998 9999999877543 1 1223 689999 899999999999999999998766 777776654
No 72
>3v2a_R Vascular endothelial growth factor receptor 2; IG-homology domain, vegfr-2, growth factor receptor, VEGF LI hormone-signaling protein complex, angiogenesis; 3.20A {Homo sapiens} PDB: 3v6b_R
Probab=99.90 E-value=2.6e-25 Score=181.05 Aligned_cols=195 Identities=21% Similarity=0.286 Sum_probs=0.0
Q ss_pred ceeeEEEeeccCCCcceecccccCCCCCeEEeCCCccEEeeCCeEEEEcccCCCCCCcEEEEeCCEEecCCCC-------
Q psy2441 3 IGTYIKIKPNLFSPLSVYSADKIPPGFPQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREMLPVDTSRN------- 75 (212)
Q Consensus 3 ~g~Y~C~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~k~g~~l~~~~~------- 75 (212)
.|.|+|.+.|..|..... ..+.+..+|.+...+. ..+.+|+.+.|.|.+.+.|.+.+.|+|+|..+.....
T Consensus 525 ~G~Y~C~a~N~~g~~~~~-~~l~V~~~p~i~~~p~-~~~~~G~~v~l~C~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~~ 602 (772)
T 3v2a_R 525 SALYKCEAVNKVGRGERV-ISFHVTRGPEITLQPD-MQPTEQESVSLWCTADRSTFENLTWYKLGPQPLPIHVGELPTPV 602 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CeEEEEEEEcccccccee-EEEEEECCceeeccCC-cccccCCceEEEEeccCCCCCCcEEEEcCCcccccccCcccccc
Confidence 489999999998865533 4455566777766654 4578999999999999999999999999865532100
Q ss_pred ----------------------CeeEEeec--CCCCeEEEeeeCCc--------cceeEEeecCCCCCCCccccCCccee
Q psy2441 76 ----------------------PRYNLLTS--GAPGTYIKIKPNLF--------SPLSVYSADKIPPGFPQITEAPSTKV 123 (212)
Q Consensus 76 ----------------------~~~~~~~~--~~~g~~l~i~~~~~--------~~~~v~~~~~~~~~~p~~~~~~~~~~ 123 (212)
..+.+... +|.|.|.|...+.. ..+.|. ...+|.+...+....
T Consensus 603 ~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~s~~~~l~v~-----~~~~P~~~~~~~~~~ 677 (772)
T 3v2a_R 603 CKNLDTLWKLNATMFSNSTNDILIMELKNASLQDQGDYVCLAQDRKTKKRHCVVRQLTVL-----ERVAPTITGNLENQT 677 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccccceeeccceeeecCCCceEEEEECCCCccCCcEEEEEEEeCCCCeEEEEEEeeccc-----ccCCCEeecCCCceE
Confidence 01222222 47888888876621 122222 122367766666777
Q ss_pred EecCCcEEEEEeeeeCCCCceEEEeCCEEecCCCCCceEEcCCCCceeEEEcCCCCCCCeeEEEEEEcccccceecceEE
Q psy2441 124 VEISHTTVLHCSASGNPPPKISWIREMLPVDTSRNPRYNLLTSGAPGALQITNSIEEDQGKYECVAENEVGTEYSPSTML 203 (212)
Q Consensus 124 ~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~n~~g~~~~~~~~l 203 (212)
+.+|+.+.|.|.+.|.|.|.+.|++++..+... .++....+. ..|.|.++..+|+|.|.|.|.|..|..... +.|
T Consensus 678 v~~g~~~~l~C~~~g~P~p~v~W~k~g~~l~~~--~~~~~~~~~--~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~-~~l 752 (772)
T 3v2a_R 678 TSIGESIEVSCTASGNPPPQIMWFKDNETLVED--SGIVLKDGN--RNLTIRRVRKEDEGLYTCQACSVLGCAKVE-AFF 752 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred EeCCCCEEEEEEeCccCCCeEEEEECCeECcCC--CCeEEcCCC--cEEEECcCCHHHCEEEEEEEEeCCcceeEE-EEE
Confidence 889999999999999999999999999888764 334333322 789999999999999999999999999887 888
Q ss_pred EEecce
Q psy2441 204 YVKGTQ 209 (212)
Q Consensus 204 ~v~~~~ 209 (212)
.|++++
T Consensus 753 ~V~~~p 758 (772)
T 3v2a_R 753 IIEGAQ 758 (772)
T ss_dssp ------
T ss_pred EEECCC
Confidence 888764
No 73
>2v5m_A Dscam; neurobiology SPL immunoglobulin domain, cell adhesion, membrane, development protein; HET: NAG; 1.95A {Drosophila melanogaster} PDB: 2v5s_A* 2v5r_A*
Probab=99.90 E-value=1.7e-22 Score=152.25 Aligned_cols=200 Identities=21% Similarity=0.283 Sum_probs=133.5
Q ss_pred ceeeEEEeeccCCCcceecccccCCCCCeEEeCCCccEEeeCCeEEEEcccCCCCC---CcEEEEeCCEEecCC------
Q psy2441 3 IGTYIKIKPNLFSPLSVYSADKIPPGFPQITEAPSTKVVEISHTTVLHCSASGNPP---PKISWIREMLPVDTS------ 73 (212)
Q Consensus 3 ~g~Y~C~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~---~~v~W~k~g~~l~~~------ 73 (212)
+|.|+|.+.|..+........+.+..+|.+...+....+.+|+.+.|.|.+.+.+. +.+.|++++..+...
T Consensus 77 ~G~Y~C~a~n~~g~~~s~~~~v~v~~~p~~~~~~~~~~v~~G~~v~l~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~ 156 (388)
T 2v5m_A 77 AQVYACLARNQFGSIISRDVHVRAVVAQYYEADVNKEHVIRGNSAVIKCLIPSFVADFVEVVSWHTDEEENYFPGAEYDG 156 (388)
T ss_dssp EEEEEEEEEETTEEEECCCEEEEEECCCCCCCBCCCEEEETTSCEEECCBCCTTTTTTEEEEEEEETTCCEECSSSCBTT
T ss_pred CceEEEEEEccCCeEEecceEEEEccccccccCccceeeecCCcEEEEEECcCCCCCCcceEEEEeCCCcccccccCCCC
Confidence 69999999998875433333344456676666677788999999999999987643 689999998765321
Q ss_pred -----CCCeeEEeec--CCC-CeEEEeeeCCc----------cceeEEeecCC-CCCCCccccCCcceeEecCCcEEEEE
Q psy2441 74 -----RNPRYNLLTS--GAP-GTYIKIKPNLF----------SPLSVYSADKI-PPGFPQITEAPSTKVVEISHTTVLHC 134 (212)
Q Consensus 74 -----~~~~~~~~~~--~~~-g~~l~i~~~~~----------~~~~v~~~~~~-~~~~p~~~~~~~~~~~~~g~~~~l~C 134 (212)
....+.+... +|. |.|.|...... ..+.|...... .+..+.+ ......+.+|+.+.|.|
T Consensus 157 ~~~~~~~~~L~i~~v~~~d~~G~Y~C~~~n~~~~~~~~~~~~~~l~v~~~~~~~~p~~~~~--~~~~~~v~~G~~v~l~C 234 (388)
T 2v5m_A 157 KYLVLPSGELHIREVGPEDGYKSYQCRTKHRLTGETRLSATKGRLVITEPISSSAPRTPAL--VQKPLELMVAHTISLLC 234 (388)
T ss_dssp TEEECTTSCEEESSCCGGGGGCCEEEEEEETTTCCEEECSSCBCEEEECCCSCEEEECCSS--CCCCEEEETTSCEEECC
T ss_pred cEEEccCCcEEEecCCccccCeeEEEEeccCCCCceeeccccceEEEecCCcCCCCcCccc--cCCceEEeeCCcEEEEE
Confidence 0123344332 366 88999876521 12333321100 0111111 22335578899999999
Q ss_pred eeeeCCCCceEEEeCCEEecCC----CCCceEEcCCCCceeEEEcCCCCCCCeeEEEEEEcccccceecceEEEEecce
Q psy2441 135 SASGNPPPKISWIREMLPVDTS----RNPRYNLLTSGAPGALQITNSIEEDQGKYECVAENEVGTEYSPSTMLYVKGTQ 209 (212)
Q Consensus 135 ~~~~~p~~~i~W~~~~~~~~~~----~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~n~~g~~~~~~~~l~v~~~~ 209 (212)
.+.+.|.|.+.|++++...... ...++... + ..|.|.++..+|.|.|.|.|.|..|..... +.|.|..++
T Consensus 235 ~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~-~---~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~-~~l~V~~~p 308 (388)
T 2v5m_A 235 PAQGFPAPSFRWYKFIEGTTRKQAVVLNDRVKQV-S---GTLIIKDAVVEDSGKYLCVVNNSVGGESVE-TVLTVTAPL 308 (388)
T ss_dssp CCEEESCCEEEEEEECTTSSCEEECCCSSSEEEE-T---TEEEESSCCGGGCEEEEEEEECSSCEEEEE-EEEEEEEEE
T ss_pred ECCCCCCCEEEEEecCCCCcccccccccCceecc-c---CEEEECcCCHHHCeEEEEEEecCCCceeEE-EEEEEeCCC
Confidence 9999999999999975322211 12233222 2 689999999999999999999999987766 777777654
No 74
>2oz4_A Intercellular adhesion molecule 1; IGSF domain, structural plasticity, cell-surface dimerizatio adhesion; HET: NAG FUC; 2.70A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 b.1.1.4 PDB: 1p53_A*
Probab=99.89 E-value=6.6e-23 Score=147.12 Aligned_cols=174 Identities=15% Similarity=0.163 Sum_probs=120.2
Q ss_pred eeeEEEeeccCCCcceecccccCCC--CCeEEeCCCccEEeeCCeEEEEcccCCCCCCcEEEEeCCEEecCCC-CCeeEE
Q psy2441 4 GTYIKIKPNLFSPLSVYSADKIPPG--FPQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREMLPVDTSR-NPRYNL 80 (212)
Q Consensus 4 g~Y~C~~~~~~~~~~~~~~~~~~~~--~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~k~g~~l~~~~-~~~~~~ 80 (212)
|.|+|.+.|..+..... ..+.+.. +|.+. +....+.+|+.+.|.|.+. |.+.++| +|.++.... ...+.+
T Consensus 74 g~Y~C~a~n~~~~~~~~-~~l~V~~~p~p~~~--~~~~~v~~G~~v~l~C~~~--p~~~i~W--~g~~~~~~~~~~~l~i 146 (265)
T 2oz4_A 74 QRLTCAVILGNQSQETL-QTVTIYSFPAPNVI--LTKPEVSEGTEVTVKCEAH--PRAKVTL--NGVPAQPLGPRAQLLL 146 (265)
T ss_dssp EEEEEEEEETTEEEEEE-EEEEEECCCCCEEE--ESCSEEETTCEEEEEEECC--TTSEEEE--SSCSSSCCSSEECCEE
T ss_pred ceEEEEEecCCCCcEEE-EEEEEeCCCCceee--cCCceecCCCcEEEEEEcc--CCCEEEE--CCEEccCCCCcEEEEE
Confidence 46999999987765433 3344422 34444 4567788999999999998 8889999 887774321 112222
Q ss_pred ee--cCCCCeEEEeeeC-C---------ccceeEEeecCCCCCCCcccc--CCcceeEecCCcEEEEEeeeeCCCCceEE
Q psy2441 81 LT--SGAPGTYIKIKPN-L---------FSPLSVYSADKIPPGFPQITE--APSTKVVEISHTTVLHCSASGNPPPKISW 146 (212)
Q Consensus 81 ~~--~~~~g~~l~i~~~-~---------~~~~~v~~~~~~~~~~p~~~~--~~~~~~~~~g~~~~l~C~~~~~p~~~i~W 146 (212)
.. .+++|.|.|.... . ...+.|... |.+.. .+....+.+|+.+.|.|.+.|+|.|.+.|
T Consensus 147 ~~~~~~~~g~Y~C~a~n~~~g~~~~~s~~~~l~V~~~-------p~~~~~~~p~~~~v~~g~~~~l~C~~~g~P~p~i~W 219 (265)
T 2oz4_A 147 KATPEDNGRSFSCSATLEVAGQLIHKNQTRELRVLYG-------PRLDERDCPGNWTWPENSQQTPMCQAWGNPLPELKC 219 (265)
T ss_dssp ECCGGGTTEEEEEEEEEECSSSEEEEEEEEEEEEEEE-------EECCGGGSCSEEEEETTCEECCCCCCEEESCCEEEE
T ss_pred ccccccCCceEEEEEEcCCCCCcccccccEEEEEEeC-------CccccccCCCccEEcCCCeEEEEeECccCCCCeEEE
Confidence 22 2467779998853 1 123444332 33322 34456788999999999999999999999
Q ss_pred EeCCEEecCCCCCceEEcCCCCceeEEEcCCCCCCCeeEEEEEEcccccceecceEEEEec
Q psy2441 147 IREMLPVDTSRNPRYNLLTSGAPGALQITNSIEEDQGKYECVAENEVGTEYSPSTMLYVKG 207 (212)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~n~~g~~~~~~~~l~v~~ 207 (212)
++++..... . +.+. .++.+|+|.|.|.|.|..|..... +.|.|+.
T Consensus 220 ~~~~~~~~~----------~---g~~~--~v~~~d~G~Y~C~a~N~~G~~~~~-~~l~V~~ 264 (265)
T 2oz4_A 220 LKDGTFPLP----------I---GESV--TVTRDLEGTYLCRARSTQGEVTRE-VTVNVLS 264 (265)
T ss_dssp EETTTEECC----------T---TSCE--ECCGGGCEEEEEEEEETTEEEEEE-EEEEEEC
T ss_pred EECCcccCC----------C---CcEE--EeehhhCeEEEEEEECCCCcEEEE-EEEEEec
Confidence 998873222 1 2222 378899999999999999998777 8887764
No 75
>1qz1_A Neural cell adhesion molecule 1, 140 kDa isoform; IG modules, NCAM; 2.00A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ie5_A
Probab=99.89 E-value=8.2e-22 Score=143.04 Aligned_cols=172 Identities=19% Similarity=0.301 Sum_probs=123.9
Q ss_pred CCeEEeCCCccEEeeCCeEEEEcccCCCC-CCcEEEEe-CCEEecCCCCCeeE------------Eeec--CCCCeEEEe
Q psy2441 29 FPQITEAPSTKVVEISHTTVLHCSASGNP-PPKISWIR-EMLPVDTSRNPRYN------------LLTS--GAPGTYIKI 92 (212)
Q Consensus 29 ~p~~~~~~~~~~v~~g~~v~l~C~~~~~p-~~~v~W~k-~g~~l~~~~~~~~~------------~~~~--~~~g~~l~i 92 (212)
++.+.+.|.+..+.+|+.+.|.|.+.+.| .+.+.|+| +|..+... ..++. +... +|.|.|.|.
T Consensus 2 ~~~v~~~p~~~~v~~G~~v~l~C~~~~~~~~~~i~W~~~~g~~~~~~-~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~ 80 (291)
T 1qz1_A 2 VLQVDIVPSQGEISVGESKFFLCQVAGDAKDKDISWFSPNGEKLSPN-QQRISVVWNDDDSSTLTIYNANIDDAGIYKCV 80 (291)
T ss_dssp CCCEEEESSSEEEETTCCEEEEEEESSCCSCCEEEEECTTSCBCCSS-CSSEEEEEEETTEEEEEECSCCGGGCEEEEEE
T ss_pred CcceEecCCCceEeCCCeEEEEEEeCCCCCCcEeEEECCCCeECccC-CceEEEEEcCCCeEEEEEecCCCCCCEEEEEE
Confidence 57788889999999999999999998876 68999999 78776543 12222 2211 378888887
Q ss_pred eeCCcc---ceeEEeecCCCCCCCccccCCcceeEecCCcEEEEEeeeeCCCCceEEEeCCEEecCCCCCceEEcCCCCc
Q psy2441 93 KPNLFS---PLSVYSADKIPPGFPQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREMLPVDTSRNPRYNLLTSGAP 169 (212)
Q Consensus 93 ~~~~~~---~~~v~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~ 169 (212)
...... ...+..... .+|.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+......++....+
T Consensus 81 ~~n~~g~~~~~~~~l~v~---~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~--- 154 (291)
T 1qz1_A 81 VTAEDGTQSEATVNVKIF---QKLMFKNAPTPQEFKEGEDAVIVCDVVSSLPPTIIWKHKGRDVILKKDVRFIVLSN--- 154 (291)
T ss_dssp EECTTSCEEEEEEEEEEE---CCSEEEECCSSEEEETTSCEEECCEEECSSCCEEEEEETTSCSSTTCCTTEEECTT---
T ss_pred EEcCCCCeeEEEEEEEee---ccccccCCCCcccccCCCeEEEEEEeccCCCCEEEEEECCEEcccCCCceEEEccC---
Confidence 766321 111111111 12566666677788999999999999999999999999998876544455555555
Q ss_pred eeEEEcCCCCCCCeeEEEEEEcccccc-eecceEEEEec
Q psy2441 170 GALQITNSIEEDQGKYECVAENEVGTE-YSPSTMLYVKG 207 (212)
Q Consensus 170 ~~l~i~~~~~~d~g~y~C~a~n~~g~~-~~~~~~l~v~~ 207 (212)
..|.|.++..+|.|.|.|.|.|..+.. ....+.+.|..
T Consensus 155 ~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~~~l~v~~ 193 (291)
T 1qz1_A 155 NYLQIRGIKKTDEGTYRCEGRILARGEINFKDIQVIVNV 193 (291)
T ss_dssp SCEEETTCCGGGCEEEEEEEEEGGGTEEEEEEEEEEEEE
T ss_pred CcEEEccCccccCeEEEEEEEecCCCceeeEEEEEEEec
Confidence 689999999999999999999976433 22224555543
No 76
>3qs7_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, CY receptor complex, extracellular complex; HET: NAG; 4.30A {Homo sapiens}
Probab=99.89 E-value=1.6e-22 Score=154.27 Aligned_cols=193 Identities=11% Similarity=0.126 Sum_probs=117.4
Q ss_pred ceeeEEEeeccCCCcceecccccCCCCCeEEeCCCccEEeeCCeEEEEcccCCCCCCcEEEEeCCEEecCCC---CCee-
Q psy2441 3 IGTYIKIKPNLFSPLSVYSADKIPPGFPQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREMLPVDTSR---NPRY- 78 (212)
Q Consensus 3 ~g~Y~C~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~k~g~~l~~~~---~~~~- 78 (212)
+|.|+|.+.|..+..... ..+.+..+|.+.. .....+..|+.+.|.|.+.|.|.|.|+|+|++..+.... ...+
T Consensus 115 ~G~Y~C~a~N~~g~~~~~-~~l~V~~~p~~~~-~~p~~~~~~~~~~L~C~a~G~P~P~i~W~k~~~~~~~~~~~~~~~~~ 192 (423)
T 3qs7_E 115 AGEYLLFIQSEATNYTIL-FTVSIRNTLLYTL-RRPYFRKMENQDALVCISESVPEPIVEWVLCDSQGESCKEESPAVVK 192 (423)
T ss_dssp CSEEEEEEEC--CEEEEE-EEEEEC-----CE-EEEEEEECSSSSCEEEEEEESSCCEEEEEEC-------------CEE
T ss_pred CEEEEEEEEcCCCcEEEE-EEEEEecCccccc-cCCcEeccCCceEEEEEEeeecCCeEEEEECCCCCcccccccccccc
Confidence 699999999988765433 3344444454321 122335568888999999999999999999887553210 0001
Q ss_pred ---EEeecCCCCeEEEeeeCCccce---eEEeecCCCCCCCccccCCcceeEecCCcEEEEEeeee-CCCCceEEEeCCE
Q psy2441 79 ---NLLTSGAPGTYIKIKPNLFSPL---SVYSADKIPPGFPQITEAPSTKVVEISHTTVLHCSASG-NPPPKISWIREML 151 (212)
Q Consensus 79 ---~~~~~~~~g~~l~i~~~~~~~~---~v~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~-~p~~~i~W~~~~~ 151 (212)
.+....+.|.|.|.+.+..... .+....... |.+ .+....+.+|+.+.|.|.+.+ .|.|.+.|++++.
T Consensus 193 ~~~~~l~~~d~G~Y~C~A~N~~G~~~~~~~~l~V~~~---p~~--~~~~~~v~~G~~v~L~C~~~g~~p~p~i~W~k~g~ 267 (423)
T 3qs7_E 193 KEEKVLHELFGTDIRCCARNELGRECTRLFTIDLNQT---PQT--TLPQLFLKVGEPLWIRCKAVHVNHGFGLTWELENK 267 (423)
T ss_dssp ECCSEECCCCSSCEEEEEECSSCEEEEECEEEESSSC---CCS--STTEEEEETTSCEEEEEEEEESSSCCCEEEEESSS
T ss_pred ccceEEecccCeEEEEEEEcCCCCcceeeEEEEEecC---Ccc--CCCceEEeCCCeEEEEEEEEcCCCCcEEEEEECCE
Confidence 1112247899999998733221 122221111 222 333567889999999999999 7779999999998
Q ss_pred EecCCCCCceE---EcCC---CCceeEEEcCCCCCCCeeEEEEEEcccccceecceEEEEecc
Q psy2441 152 PVDTSRNPRYN---LLTS---GAPGALQITNSIEEDQGKYECVAENEVGTEYSPSTMLYVKGT 208 (212)
Q Consensus 152 ~~~~~~~~~~~---~~~~---~~~~~l~i~~~~~~d~g~y~C~a~n~~g~~~~~~~~l~v~~~ 208 (212)
.+... ..+. ...+ .....|.|.++..+|+|.|.|.|.|. .... +.|.|.++
T Consensus 268 ~l~~~--~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~N~---~~~~-~~L~V~~~ 324 (423)
T 3qs7_E 268 ALEEG--NYFEMSTYSTNRTMIRILFAFVSSVARNDTGYYTCSSSKH---PSQS-ALVTIVEK 324 (423)
T ss_dssp BCCGG--GEEEEEEEETTTEEEEEEEEEESSCCTTTCEEEEEEETTE---EEEE-EEEEEESS
T ss_pred Ecccc--ceeecccccCCceeEEEEEEEEeecCHHHCEEEEEEEecC---CCce-EEEEEEeC
Confidence 76542 1110 0000 00257999999999999999999998 3333 67777654
No 77
>3p2t_A Leukocyte immunoglobulin-like receptor subfamily 4; LILR, IG, inhibitory receptor, disulfide, immune system; 1.70A {Homo sapiens}
Probab=99.89 E-value=4.2e-22 Score=136.77 Aligned_cols=172 Identities=15% Similarity=0.213 Sum_probs=116.1
Q ss_pred CCCeEEeCCCccEEeeCCeEEEEcccCCCCCCcEEEEeCCEEecCC--------CCCeeEEeec--CCCCeEEEeeeCC-
Q psy2441 28 GFPQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREMLPVDTS--------RNPRYNLLTS--GAPGTYIKIKPNL- 96 (212)
Q Consensus 28 ~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~k~g~~l~~~--------~~~~~~~~~~--~~~g~~l~i~~~~- 96 (212)
.+|.+...|.. .+.+|+.++|.|.+.+ +.+.+.|+|+|..+... ....+.+... .|.|.|.|...+.
T Consensus 4 ~~P~i~~~p~~-~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~ 81 (196)
T 3p2t_A 4 PKPTLWAEPGS-VISWGNSVTIWCQGTL-EAREYRLDKEESPAPWDRQNPLEPKNKARFSIPSMTEDYAGRYRCYYRSPV 81 (196)
T ss_dssp CCCEEEEESCS-EEETTCCEEEEEECCT-TCCEEEEEETTSCSCSEEECCCSSSSEEEEEESSCCGGGCEEEEEEEEETT
T ss_pred CCCEEEccCCC-cCCCCCcEEEEeeCCC-CCCEEEEEECCCCCcccccccccCCceEEEEeccCCcccCceEEEEEeCCC
Confidence 57888877777 8899999999999988 67889999999776421 1123344332 4899999987652
Q ss_pred -----ccceeEEeecCCCCCCCccccCCcceeEecCCcEEEEEeeeeCCCCceEEEeCCEEecCCCCCceEEcCCCCcee
Q psy2441 97 -----FSPLSVYSADKIPPGFPQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREMLPVDTSRNPRYNLLTSGAPGA 171 (212)
Q Consensus 97 -----~~~~~v~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (212)
...+.+.... ...+|.+...+.. .+.+|+.+.|.|.+.+. .+.+.|++++..+... ..............
T Consensus 82 g~~~~s~~~~l~V~~--~~~~p~~~~~~~~-~v~~G~~v~L~C~~~~~-~~~~~w~k~g~~~~~~-~~~~~~~~~~~~~~ 156 (196)
T 3p2t_A 82 GWSQPSDPLELVMTG--AYSKPTLSALPSP-LVTSGKSVTLLCQSRSP-MDTFLLCKERAAHPLL-CLRSEHGAQQHQAE 156 (196)
T ss_dssp EEBCCCCCEEEEEEC--SSCCCEEEEESCS-EECTTCCEEEEEEEEEE-EEEEEEEETTCCCGGG-SEEEEEEEEEEEEE
T ss_pred cccCCCccEEEEecC--CCCCCEEEeCCcc-eecCCCeEEEEEecCCC-CCEEEEEeCCCcccce-eecccccccCcceE
Confidence 2223333221 1123555544443 57889999999999884 4589999998766542 11111101111278
Q ss_pred EEEcCCCCCCCeeEEEEEEcccc----cceecceEEEEe
Q psy2441 172 LQITNSIEEDQGKYECVAENEVG----TEYSPSTMLYVK 206 (212)
Q Consensus 172 l~i~~~~~~d~g~y~C~a~n~~g----~~~~~~~~l~v~ 206 (212)
|.|.+++.+|+|.|.|.|.|..+ +..+..+.|.|.
T Consensus 157 L~i~~v~~~d~G~Y~C~a~n~~~~~~~s~~S~~~~l~V~ 195 (196)
T 3p2t_A 157 FPMSPVTSVHGGTYRCFSSHGFSHYLLSHPSDPLELIVS 195 (196)
T ss_dssp EEECSCCGGGCEEEEEEEECGGGTTEECCCCCCEEEEEC
T ss_pred EEeCCCcccCCCeEEEEEEcCCCCcccCCCCCCEEEEeC
Confidence 99999999999999999999987 444444666664
No 78
>1cs6_A Axonin-1; neural cell adhesion, cell adhesion; 1.80A {Gallus gallus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4 PDB: 2om5_A
Probab=99.89 E-value=1.6e-22 Score=152.27 Aligned_cols=196 Identities=21% Similarity=0.294 Sum_probs=131.2
Q ss_pred ceeeEEEeeccCCCcceecccccCCCCCeEE-eCCCccEEeeCCeEEEEccc-CCCCCCcEEEEeCCEEecCCC------
Q psy2441 3 IGTYIKIKPNLFSPLSVYSADKIPPGFPQIT-EAPSTKVVEISHTTVLHCSA-SGNPPPKISWIREMLPVDTSR------ 74 (212)
Q Consensus 3 ~g~Y~C~~~~~~~~~~~~~~~~~~~~~p~~~-~~~~~~~v~~g~~v~l~C~~-~~~p~~~v~W~k~g~~l~~~~------ 74 (212)
+|.|+|.+.|..+........+.+..+|.+. ..+....+.+|+.+.|.|.+ .+.|.+.+.|+|++.++....
T Consensus 74 ~G~Y~C~a~n~~g~~~s~~~~l~v~~~~~~~~~~~~~~~v~~G~~v~l~C~~~~~~p~~~i~W~~~~~~~~~~~~~~~~~ 153 (382)
T 1cs6_A 74 AGSYQCVATNARGTVVSREASLRFGFLQEFSAEERDPVKITEGWGVMFTCSPPPHYPALSYRWLLNEFPNFIPADGRRFV 153 (382)
T ss_dssp CEEEEEEEEETTEEEECCCEEEEEEEECCCCSSCCCCEEEETTSCEEECCCCCSEESCCEEEEEESSTTCBCCCCSSEEE
T ss_pred CEEEEEEEEcCCcEEEecceEEEeeccccccccCCCceEEecCCcEEEEeCCCCCCCCcEEEEEECCCccccccCceEEE
Confidence 5899999999877543333333333333333 23556789999999999996 456888999999986643211
Q ss_pred ---CCeeEEeec--CCCCeEEEeeeCCc-----------cceeEEeecCCCCCCCcccc-CCcceeEecCCcEEEEEeee
Q psy2441 75 ---NPRYNLLTS--GAPGTYIKIKPNLF-----------SPLSVYSADKIPPGFPQITE-APSTKVVEISHTTVLHCSAS 137 (212)
Q Consensus 75 ---~~~~~~~~~--~~~g~~l~i~~~~~-----------~~~~v~~~~~~~~~~p~~~~-~~~~~~~~~g~~~~l~C~~~ 137 (212)
...+.+... .|.|.|.|...... ..+.+... .....+|.+.. .+....+.+|+.+.|.|.+.
T Consensus 154 ~~~~~~L~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~s~~~~l~v~~~-~~~~~~P~~~~~~~~~~~~~~G~~v~l~C~~~ 232 (382)
T 1cs6_A 154 SQTTGNLYIAKTEASDLGNYSCFATSHIDFITKSVFSKFSQLSLAAE-DARQYAPSIKAKFPADTYALTGQMVTLECFAF 232 (382)
T ss_dssp CTTTCCEEESSCCGGGCEEEEEEEEEEETTEEEEEECCCEEEEEESC-CCCCEEEEEEECCCSEEEEETTCCEEEECEEE
T ss_pred ecCceEEEEEeeCcccCeeEEEEEEEccccccceeEccceeeccchh-hcccCCCceeccCCCceEEeCCCeEEEEEEEc
Confidence 123333332 37888888776522 11222111 00111244433 34457788999999999999
Q ss_pred eCCCCceEEEeCCEEecCCCCCceEEcCCCCceeEEEcCCCCCCCeeEEEEEEcccccceecceEEEEecc
Q psy2441 138 GNPPPKISWIREMLPVDTSRNPRYNLLTSGAPGALQITNSIEEDQGKYECVAENEVGTEYSPSTMLYVKGT 208 (212)
Q Consensus 138 ~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~n~~g~~~~~~~~l~v~~~ 208 (212)
+.|.+.+.|++++..+... .... ...|.|.++..+|.|.|.|.|.|..|..... +.|.|...
T Consensus 233 g~p~~~i~W~~~~~~~~~~------~~~~--~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~-~~l~V~~~ 294 (382)
T 1cs6_A 233 GNPVPQIKWRKLDGSQTSK------WLSS--EPLLHIQNVDFEDEGTYECEAENIKGRDTYQ-GRIIIHAQ 294 (382)
T ss_dssp EESCCEEEEEECCSCCSCC------CSBS--SSEEEECSCCGGGCEEEEEEEEETTEEEEEE-EEEEEEEE
T ss_pred cCCCCEEEEEECCcccccE------EecC--CcEEEEccCChhhCEEEEEEEEcCCCeEEEE-EEEEEecC
Confidence 9999999999987665431 1111 2789999999999999999999999987666 77777654
No 79
>2rcj_C Light chain; immunoglobulin M, polymeric antibodies, immunology, X-RAY solution scattering, constrained modelling, immune system; NMR {Homo sapiens}
Probab=99.89 E-value=1.1e-21 Score=153.53 Aligned_cols=199 Identities=16% Similarity=0.152 Sum_probs=129.0
Q ss_pred ceeeEEEeeccCCCc--ceecccccC----CCCCeEEeCCCccEEeeCCeEEEEcccCCCCCC--cEEEEeCCEEecCCC
Q psy2441 3 IGTYIKIKPNLFSPL--SVYSADKIP----PGFPQITEAPSTKVVEISHTTVLHCSASGNPPP--KISWIREMLPVDTSR 74 (212)
Q Consensus 3 ~g~Y~C~~~~~~~~~--~~~~~~~~~----~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~--~v~W~k~g~~l~~~~ 74 (212)
+|.|+|.+.|..+.. ......+.+ ..+|.+.+.+....+.+|+.+.|.|.+.+.|++ .|+|+|+|.++....
T Consensus 82 ~G~Y~C~a~n~~g~~~~~~~~~~l~V~~~~~~~P~~~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~ 161 (523)
T 2rcj_C 82 ESDYYCASWNSSDNSYVFGTGTKVTVLGQPKANPTVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADGSPVKAGV 161 (523)
T ss_pred CEEEEEEEccCCCccccccCceEEEeccCCCcCCeEEecCCcccccCCCceEEEEEeccccCCceEEEEecCCCCCCCce
Confidence 599999999976531 111223333 467888877777778889999999999987654 899999998775421
Q ss_pred ---------CC------eeEEeec--CCCCeEEEeeeCCcc--ceeEEee-cCCCCCCCccccCCcceeEecCCcEEEEE
Q psy2441 75 ---------NP------RYNLLTS--GAPGTYIKIKPNLFS--PLSVYSA-DKIPPGFPQITEAPSTKVVEISHTTVLHC 134 (212)
Q Consensus 75 ---------~~------~~~~~~~--~~~g~~l~i~~~~~~--~~~v~~~-~~~~~~~p~~~~~~~~~~~~~g~~~~l~C 134 (212)
.. .+.+... +|.|.|.|...+... ...+... ......+|.+........+.+|+.+.|.|
T Consensus 162 ~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~~~~~~~~~~~P~v~~~~~~~~~~~G~~~~l~C 241 (523)
T 2rcj_C 162 ETTKPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECSASTKGPSVFPLAPSSKSTSGGTAALGC 241 (523)
T ss_pred EeccccccCCCCEEEEEEEEEechhcCCCceEEEEEEecCcccccceeeeecCCCCcCCEEEecCCCcccccCCceEEEE
Confidence 11 1233332 478999998877322 2222211 11112234444333334457899999999
Q ss_pred eeeeC-CCC-ceEEEeCCEEecCCCCCceEEcCCCC---ceeEEEcCCCCCCCeeEEEEEEcccccceecceEEE
Q psy2441 135 SASGN-PPP-KISWIREMLPVDTSRNPRYNLLTSGA---PGALQITNSIEEDQGKYECVAENEVGTEYSPSTMLY 204 (212)
Q Consensus 135 ~~~~~-p~~-~i~W~~~~~~~~~~~~~~~~~~~~~~---~~~l~i~~~~~~d~g~y~C~a~n~~g~~~~~~~~l~ 204 (212)
.+.+. |.| .+.|++++..+......++. ..++. .+.|.|.++..+| |.|.|.|.|..|..... ..+.
T Consensus 242 ~~~g~~P~p~~v~W~k~g~~~~~~~~~~~~-~~~g~~~~~s~L~i~~~~~~d-G~Y~C~a~n~~g~~~~~-~~l~ 313 (523)
T 2rcj_C 242 LVKDYFPQPVTVSWNSGALTSGVHTFPAVL-QSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVD-KRVE 313 (523)
T ss_pred EEeceeCCCeEEEEecCCcccceEeCCcEe-cCCCcEEEEEEEEechhhcCC-ceEEEEEEeCCCCcceE-EecC
Confidence 99886 777 89999998765432111111 11110 2589999999999 99999999999886544 4443
No 80
>3rjd_A High affinity immunoglobulin gamma FC receptor I; immune system; HET: NAG MAN FUC P33; 2.65A {Homo sapiens}
Probab=99.89 E-value=2.5e-21 Score=138.34 Aligned_cols=160 Identities=19% Similarity=0.195 Sum_probs=125.0
Q ss_pred CCeEEeCCCccEEeeCCeEEEEcccCCCCCC-cEEEEeCCEEecCCCCCeeEEeec--CCCCeEEEeeeCCc----ccee
Q psy2441 29 FPQITEAPSTKVVEISHTTVLHCSASGNPPP-KISWIREMLPVDTSRNPRYNLLTS--GAPGTYIKIKPNLF----SPLS 101 (212)
Q Consensus 29 ~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~-~v~W~k~g~~l~~~~~~~~~~~~~--~~~g~~l~i~~~~~----~~~~ 101 (212)
+|.+...|....+.+|+.+.|.|.+.+.|.+ .+.|+|+|..+... ..++.+... +|.|.|.|...... ..+.
T Consensus 1 kP~i~~~p~~~~v~~G~~v~l~C~~~~~~~~~~~~W~~~g~~~~~~-~~~l~i~~~~~~d~G~Y~C~~~~~~~s~~~~l~ 79 (262)
T 3rjd_A 1 KAVITLQPPWVSVFQEETVTLHCEVLHLPGSSSTQWFLNGTATQTS-TPSYRITSASVNDSGEYRCQRGLSGRSDPIQLE 79 (262)
T ss_dssp CCEEEESSCCSEEETTCCEEEEEECSSCCCTTCEEEEETTEECSCC-SSEEEESSCCGGGCEEEEEEESSSCCCCCEEEE
T ss_pred CCeEecCCCcEEeeCCCeEEEEEECCCCCCCceEEEEECCEEeecc-CCeEEEecCCcccCeEEEEEEecCCccccEEEE
Confidence 5788889999999999999999999988887 89999999998654 356666544 48999999887632 2333
Q ss_pred EEeecCCCCCCCccccCCcceeEecCCcEEEEEee-eeCCCCceEEEeCCEEecCCCCCceEEcCCCCceeEEEcCCCCC
Q psy2441 102 VYSADKIPPGFPQITEAPSTKVVEISHTTVLHCSA-SGNPPPKISWIREMLPVDTSRNPRYNLLTSGAPGALQITNSIEE 180 (212)
Q Consensus 102 v~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~-~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~ 180 (212)
|.. +.+...+....+.+|+.+.|.|.+ .+.|.+.+.|++++..+... ..+ ..|.|.++..+
T Consensus 80 v~~--------~~~~~~~~~~~~~~g~~v~l~C~~~~~~p~~~v~W~~~g~~~~~~-------~~~---~~l~i~~~~~~ 141 (262)
T 3rjd_A 80 IHR--------GWLLLQVSSRVFTEGEPLALRCHAWKDKLVYNVLYYRNGKAFKFF-------HWN---SNLTILKTNIS 141 (262)
T ss_dssp EEC--------SSEEEEESCSEEETTSCEEEEEEEGGGCCCEEEEEEETTEEEEEE-------EEC---CCEEESSCCGG
T ss_pred Eec--------cceEecCCCeEEecCCeEEEEEEccCCCCCceEEEEECCcccccc-------CCC---CeEEEEECChh
Confidence 332 223334445667889999999999 77888899999999887542 112 68999999999
Q ss_pred CCeeEEEEEEcccccceecceEEEEecc
Q psy2441 181 DQGKYECVAENEVGTEYSPSTMLYVKGT 208 (212)
Q Consensus 181 d~g~y~C~a~n~~g~~~~~~~~l~v~~~ 208 (212)
|.|.|.|.+.|..+..... +.|.|.+.
T Consensus 142 d~G~Y~C~~~n~~~~~~~~-~~l~V~~~ 168 (262)
T 3rjd_A 142 HNGTYHCSGMGKHRYTSAG-ISVTVKEL 168 (262)
T ss_dssp GCEEEEEEEESSSEEEEEC-EEEEEECS
T ss_pred hCEEEEEEEeCCCCccccc-eEEEeccC
Confidence 9999999999998777666 78888764
No 81
>2r15_A Myomesin-1; sarcomeric protein, IG-like domains, homodimer, immunoglobul domain, muscle protein, thick filament, contractIle protein; 2.24A {Homo sapiens}
Probab=99.89 E-value=3.1e-21 Score=133.73 Aligned_cols=162 Identities=19% Similarity=0.254 Sum_probs=114.7
Q ss_pred eeCCeEEEEcccCCC-CCCcEEEEeCCEEecCCCCCeeEEee-----------c--CCCCeEEEeeeCCccce--eEEee
Q psy2441 42 EISHTTVLHCSASGN-PPPKISWIREMLPVDTSRNPRYNLLT-----------S--GAPGTYIKIKPNLFSPL--SVYSA 105 (212)
Q Consensus 42 ~~g~~v~l~C~~~~~-p~~~v~W~k~g~~l~~~~~~~~~~~~-----------~--~~~g~~l~i~~~~~~~~--~v~~~ 105 (212)
.+++.+.|.|.+.+. |.+.+.|+|+|.++... .++.+.. . +|.|.|.|......... .+...
T Consensus 15 c~~~~~~l~C~~~~~~p~~~i~W~~~g~~i~~~--~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~n~~~~~~~~~~l~ 92 (212)
T 2r15_A 15 STAEGIQLYSFVTYYVEDLKVNWSHNGSAIRYS--DRVKTGVTGEQIWLQINEPTPNDKGKYVMELFDGKTGHQKTVDLS 92 (212)
T ss_dssp ECSSEEEEEEEBSSCCSSCEEEEEETTEECCCC--SSEEEEEETTEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEEC
T ss_pred EcCceEEEEEEEeccCCCceEEEEECCEEccCC--CeEEEEEeCCEEEEEECCCCcccCEEEEEEEecCCcceEEEEEEE
Confidence 467888999999875 57899999999998765 4433222 1 37778888766622211 11111
Q ss_pred cCC------------------CCCCCccccCCcceeEecCCcEEEEEeeeeCCCCceEEEeCCEEecCCCCCceEEcCC-
Q psy2441 106 DKI------------------PPGFPQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREMLPVDTSRNPRYNLLTS- 166 (212)
Q Consensus 106 ~~~------------------~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~- 166 (212)
... ...++.+...+....+.+|+.+.|.|.+.+.|.|.+.|++++..+... .++.....
T Consensus 93 v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~v~W~~~~~~~~~~--~~~~~~~~~ 170 (212)
T 2r15_A 93 GQAYDEAYAEFQRLKQAAIAEKNRARVLGGLPDVVTIQEGKALNLTCNVWGDPPPEVSWLKNEKALAQT--DHCNLKFEA 170 (212)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHSCEEEEBCCSEEEEETTCCEEEEEEEECSSCCEEEEEETTEEECCC--SSEEEEEET
T ss_pred EeeccchhhhccccCcccccccCCCcccccCCCcEEEccCCeEEEEEEEcCCCCceEEEEECCeECccC--CCEEEEEcC
Confidence 000 001122333455577889999999999999999999999999998875 34443332
Q ss_pred CCceeEEEcCCCCCCCeeEEEEEEcccccceecceEEEEecc
Q psy2441 167 GAPGALQITNSIEEDQGKYECVAENEVGTEYSPSTMLYVKGT 208 (212)
Q Consensus 167 ~~~~~l~i~~~~~~d~g~y~C~a~n~~g~~~~~~~~l~v~~~ 208 (212)
+....|.|.++..+|.|.|.|.|.|..|..... +.|.|.++
T Consensus 171 ~~~~~L~i~~~~~~d~G~Y~C~a~N~~g~~~~~-~~l~V~~P 211 (212)
T 2r15_A 171 GRTAYFTINGVSTADSGKYGLVVKNKYGSETSD-FTVSVFIP 211 (212)
T ss_dssp TTEEEEEESSCCGGGCEEEEEEEEETTEEEEEE-EEEEEECC
T ss_pred CCEEEEEEcCcchHHCeEEEEEEEcCCCcEEEE-EEEEEEcc
Confidence 334699999999999999999999999998777 88887754
No 82
>1nbq_A JAM, junctional adhesion molecule 1, PAM-1; reovirus receptor, tight junction formation, immunoglobulin superfamily, immune system; 2.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4 PDB: 3eoy_G
Probab=99.88 E-value=2.9e-22 Score=138.56 Aligned_cols=174 Identities=21% Similarity=0.391 Sum_probs=118.5
Q ss_pred CCCeEEeCCCccEEeeCCeEEEEcccCCCCCCcEEEEeCCEEe----------cCCCCCeeE-------Eeec--CCCCe
Q psy2441 28 GFPQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREMLPV----------DTSRNPRYN-------LLTS--GAPGT 88 (212)
Q Consensus 28 ~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~k~g~~l----------~~~~~~~~~-------~~~~--~~~g~ 88 (212)
.++.+...+....+.+|+.+.|.|.+.+.|.+.+.|+|++..+ ......++. +... +|.|.
T Consensus 3 ~~~~i~~~~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~L~i~~~~~~d~G~ 82 (209)
T 1nbq_A 3 GSVTVHSSEPEVRIPENNPVKLSCAYSGFSSPRVEWKFDQGDTTRLVCYNNKITASYEDRVTFLPTGITFKSVTREDTGT 82 (209)
T ss_dssp CCCEEECSCSBCCEETTCCCEEECEEESCSSEEEEEEEEETTEEEESEETTEECTTTTTTCEEETTEEECSCCCTTSCSE
T ss_pred ceEEEEcCCCceEEEcCCCEEEEEEEeCCCCcEEEEEEcCCceeEEEEecCccCccccCceEeeccEEEEeeCCHHHCcE
Confidence 3566777788889999999999999998899999999987552 111122332 2222 48899
Q ss_pred EEEeeeCC----ccceeEEeecCCCCCCCccccCCcceeEecCCcEEEEEee-eeCCCCceEEEeCCEEecCCCC-----
Q psy2441 89 YIKIKPNL----FSPLSVYSADKIPPGFPQITEAPSTKVVEISHTTVLHCSA-SGNPPPKISWIREMLPVDTSRN----- 158 (212)
Q Consensus 89 ~l~i~~~~----~~~~~v~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~-~~~p~~~i~W~~~~~~~~~~~~----- 158 (212)
|.|..... .....+......+ |.+........+.+|+.+.|.|.+ .+.|.+.+.|++++..+.....
T Consensus 83 Y~C~~~~~~g~~~~~~~~~l~V~~~---p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~ 159 (209)
T 1nbq_A 83 YTCMVSEEGGNSYGEVKVKLIVLVP---PSKPTVNIPSSATIGNRAVLTCSEQDGSPPSEYTWFKDGIVMPTNPKSTRAF 159 (209)
T ss_dssp EEEEEEETTSSCEECCEEECCEEBC---CCCCCCCCBSEEETTSCEEECCCCCSCBSCCEEEEEETTCCCCSCSSSSSSC
T ss_pred EEEEEecCCCCccceEEEEEEEecC---CcCCCcccccceecCCEEEEEEeCCCCCCCceeEEEECCeeCCCccccceee
Confidence 99977652 1112222221122 333333334567889999999997 8999999999999988765411
Q ss_pred --CceEEcCCCCceeEEEcCCCCCCCeeEEEEEEccccccee-cceEEEEe
Q psy2441 159 --PRYNLLTSGAPGALQITNSIEEDQGKYECVAENEVGTEYS-PSTMLYVK 206 (212)
Q Consensus 159 --~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~n~~g~~~~-~~~~l~v~ 206 (212)
.++..... ...|.|.++..+|.|.|.|.|.|..|.... ..+.|.|+
T Consensus 160 ~~~~~~~~~~--~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~s~~v~l~V~ 208 (209)
T 1nbq_A 160 SNSSYVLNPT--TGELVFDPLSASDTGEYSCEARNGYGTPMTSNAVRMEAV 208 (209)
T ss_dssp TTCCCCCCTT--TCCEEESSCCGGGCCCEEEEEECSSSCCEECCCBCCEEE
T ss_pred eccceEEcCC--cceEEEEeccccCCeEEEEEEeCCcCcccccccEEEEEe
Confidence 11222112 378999999999999999999999998832 22555554
No 83
>3o4o_C Interleukin-1 receptor type 2; cytokine-receptor complex, beta-trefoil, IG-like fold, immun; HET: NAG; 3.30A {Homo sapiens}
Probab=99.88 E-value=1.2e-23 Score=155.98 Aligned_cols=198 Identities=17% Similarity=0.236 Sum_probs=133.9
Q ss_pred ceeeEEEeeccCCCcceecccccCCCCCeEE--eCCCccEEeeCCeEEEEcc-----cCCCCCCcEEEEeCCEEecCCC-
Q psy2441 3 IGTYIKIKPNLFSPLSVYSADKIPPGFPQIT--EAPSTKVVEISHTTVLHCS-----ASGNPPPKISWIREMLPVDTSR- 74 (212)
Q Consensus 3 ~g~Y~C~~~~~~~~~~~~~~~~~~~~~p~~~--~~~~~~~v~~g~~v~l~C~-----~~~~p~~~v~W~k~g~~l~~~~- 74 (212)
+|.|+|.+.|..+..... ..+.+..+|... .......+.+|+.+.|.|. +.+.|.+.+.|+|+|..+....
T Consensus 93 ~G~Y~C~~~n~~g~~~~~-~~l~V~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~g~p~~~v~W~k~g~~~~~~~~ 171 (339)
T 3o4o_C 93 SGTYVCTTRNASYCDKMS-IELRVFENTDAFLPFISYPQILTLSTSGVLVCPDLSEFTRDKTDVKIQWYKDSLLLDKDNE 171 (339)
T ss_dssp CEEEECCEEETTEEEEEE-EEEEEECSCGGGHHHHCEEEEEETTSCEEEECCSCTTTCCSSSCCCBCCEESSCBCCTTCS
T ss_pred CEEEEEEEECCcceEEEE-EEEEEEcCCCccccccccceEEECCCCEEEEecCCcccccCCCCceEEEecCCeeCCCCCc
Confidence 699999999987654333 333333333211 1222347889999999999 7788999999999998886541
Q ss_pred -------CCeeEEeec--CCCCeEEEeeeCCc----------cceeEEeecCCCCCCCccccCCcceeEecCCcEEEEEe
Q psy2441 75 -------NPRYNLLTS--GAPGTYIKIKPNLF----------SPLSVYSADKIPPGFPQITEAPSTKVVEISHTTVLHCS 135 (212)
Q Consensus 75 -------~~~~~~~~~--~~~g~~l~i~~~~~----------~~~~v~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~ 135 (212)
...+.+... +|.|.|.|...+.. ..+.|.. .....+|.+...+....+.+|+.+.|.|.
T Consensus 172 ~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~~~~~l~V~~--~~~~~~P~i~~~~~~~~v~~G~~v~L~C~ 249 (339)
T 3o4o_C 172 KFLSVRGTTHLLVHDVALEDAGYYRCVLTFAHEGQQYNITRSIELRIKK--KKEETIPVIISPLKTISASLGSRLTIPCK 249 (339)
T ss_dssp SEEECTTSSEEEESSCCGGGCEEEEEEEECCBTTBCCEEEEEEEEEEEC--CCCCCCCEECCCSCCCCCCCCSCCCCCCC
T ss_pred eeEEcCCcceEEEcccCHhhCeEEEEEEEECCCCeEEEEEEEEEEEEEc--CCCCCCCEEecCCceeEeccCCCEEEEEE
Confidence 123444333 48899999876521 2222222 11122466666666677888999999999
Q ss_pred e---eeCC-CCceEEEeCCEEecCC-------CCCceEEcCCCC---ceeEEEcCCCCCCC-eeEEEEEEcccccceecc
Q psy2441 136 A---SGNP-PPKISWIREMLPVDTS-------RNPRYNLLTSGA---PGALQITNSIEEDQ-GKYECVAENEVGTEYSPS 200 (212)
Q Consensus 136 ~---~~~p-~~~i~W~~~~~~~~~~-------~~~~~~~~~~~~---~~~l~i~~~~~~d~-g~y~C~a~n~~g~~~~~~ 200 (212)
+ .+.| .+.+.|++++..+... ...++....++. ...|.|.++..+|. |.|.|.|.|..|.....
T Consensus 250 ~~~~~g~P~~~~v~W~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~L~i~~v~~~d~~G~Y~C~a~N~~G~~~~~- 328 (339)
T 3o4o_C 250 VFLGTGTPLTTMLWWTANDTHIESAYPGGRVTEGPRQEYSENNENYIEVPLIFDPVTREDLHMDFKCVVHNTLSFQTLR- 328 (339)
T ss_dssp EEESSSCCSSCEEEEESSSSCSSSSSCSSSCEECCCEECCCSSSCEEEECCEECSSCCCSCCCCCEEEEEETTEEECCB-
T ss_pred EECCCCCCCCceEEEEECCeecccccccccceecceEEecccCceEEEEEEEEEEechhhcCccEEEEEEeccCceEEE-
Confidence 9 8999 7899999998876532 112222222321 12799999999997 99999999999998766
Q ss_pred eEEE
Q psy2441 201 TMLY 204 (212)
Q Consensus 201 ~~l~ 204 (212)
+.+.
T Consensus 329 ~~~~ 332 (339)
T 3o4o_C 329 TTVK 332 (339)
T ss_dssp CCCC
T ss_pred EEhh
Confidence 5543
No 84
>2d3v_A Leukocyte immunoglobulin-like receptor subfamily A member 5 isoform 1; immunoglobulin-like fold, immune system; 1.85A {Homo sapiens}
Probab=99.88 E-value=4.9e-22 Score=136.43 Aligned_cols=160 Identities=13% Similarity=0.143 Sum_probs=99.8
Q ss_pred CCCeEEeCCCccEEeeCCeEEEEcccCCCCCCcEEEEeCCEEecC--------CCCCeeEEeec--CCCCeEEEeeeCC-
Q psy2441 28 GFPQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREMLPVDT--------SRNPRYNLLTS--GAPGTYIKIKPNL- 96 (212)
Q Consensus 28 ~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~k~g~~l~~--------~~~~~~~~~~~--~~~g~~l~i~~~~- 96 (212)
.+|.+...|.. .+.+|+++.|.|.+.+.|. .+.|||+|..+.. .....+.+... .|.|.|.|...+.
T Consensus 4 ~~P~i~~~p~~-~v~~G~~v~L~C~~~~~~~-~~~W~k~g~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~ 81 (196)
T 2d3v_A 4 SKATLWAEPGS-VISRGNSVTIRCQGTLEAQ-EYRLVKEGSPEPWDTQNPLEPKNKARFSIPSMTEHHAGRYRCYYYSPA 81 (196)
T ss_dssp CBCEEEEESCS-EEETTCCEEEEEECCTTCC-EEEEEETTCSSCSEEECCCSSTTEEEEEESSCCGGGCEEEEEEEEETT
T ss_pred CCCEEEeCCCC-cccCCCeEEEEEeCCCCCc-EEEEEECCCCCCcccccccCCccccEEEeccCChhHCeEEEEEEeCCC
Confidence 57888877764 8899999999999988765 8999999976632 11233444333 4899999987542
Q ss_pred -----ccceeEEeecCCCCCCCccccCCcceeEecCCcEEEEEeeeeCCCCceEEEeCCEEecCCCCCceEEcC-CCCce
Q psy2441 97 -----FSPLSVYSADKIPPGFPQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREMLPVDTSRNPRYNLLT-SGAPG 170 (212)
Q Consensus 97 -----~~~~~v~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~-~~~~~ 170 (212)
...+.+.... ....|.+...+. ..+.+|+.+.|.|.+.+.| +.+.|++++..+... ........ .....
T Consensus 82 g~~~~s~~~~l~V~~--~~~~p~i~~~~~-~~v~~G~~v~L~C~~~~~p-~~~~W~k~g~~~~~~-~~~~~~~~~~~~~~ 156 (196)
T 2d3v_A 82 GWSEPSDPLELVVTG--FYNKPTLSALPS-PVVTSGENVTLQCGSRLRF-DRFILTEEGDHKLSW-TLDSQLTPSGQFQA 156 (196)
T ss_dssp EECBCCCCEEEEEEC--SSCCCEEEC------------CEEEEEESSCC-SEEEEEEC---CCEE-EEECEECTTSCEEE
T ss_pred CcCCcCccEEEEecC--CCCCCeEEccCC-ccccCCCcEEEEEEcCCCC-CEEEEEccCCccccc-ccccccccCCCcee
Confidence 1222333221 111355544433 4678899999999999988 899999999776432 00101111 11237
Q ss_pred eEEEcCCCCCCCeeEEEEEEcccc
Q psy2441 171 ALQITNSIEEDQGKYECVAENEVG 194 (212)
Q Consensus 171 ~l~i~~~~~~d~g~y~C~a~n~~g 194 (212)
.|.|.+++.+|+|.|.|.|.|..+
T Consensus 157 ~L~I~~v~~~D~G~Y~C~a~n~~~ 180 (196)
T 2d3v_A 157 LFPVGPVTPSHRWMLRCYGSRRHI 180 (196)
T ss_dssp EEECCCCBTTBCEEEEEEEEETTE
T ss_pred EEEeeecCcccCeeEEEEEEccCC
Confidence 899999999999999999999754
No 85
>1ugn_A LIR1, leukocyte immunoglobulin-like receptor 1; immunoglobulin-like folds, immune system; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 3d2u_D* 1g0x_A 1p7q_D 1ufu_A 1vdg_A 2gw5_A 2dyp_D 2otp_A 3q2c_A
Probab=99.88 E-value=1.8e-21 Score=133.78 Aligned_cols=172 Identities=14% Similarity=0.136 Sum_probs=112.5
Q ss_pred CCCeEEeCCCccEEeeCCeEEEEcccCCCCCCcEEEEeCCEEecC--------CCCCeeEEeec--CCCCeEEEeeeCCc
Q psy2441 28 GFPQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREMLPVDT--------SRNPRYNLLTS--GAPGTYIKIKPNLF 97 (212)
Q Consensus 28 ~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~k~g~~l~~--------~~~~~~~~~~~--~~~g~~l~i~~~~~ 97 (212)
.+|.+...|. ..+.+|++++|.|.+.+.|. .+.|+|+|..+.. .....+.+... .|.|.|.|...+..
T Consensus 4 ~~P~i~~~p~-~~v~~G~~v~L~C~~~~~~~-~~~W~k~g~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~ 81 (198)
T 1ugn_A 4 PKPTLWAEPG-SVITQGSPVTLRCQGGQETQ-EYRLYREKKTAPWITRIPQELVKKGQFPIPSITWEHTGRYRCYYGSDT 81 (198)
T ss_dssp CCCEEEEESC-SEEETTCCEEEEEECCTTCC-CEEEEESSSCCHHHHTSCHHHHTTTEEEESSCCGGGCEEEEEEEEETT
T ss_pred CCCeEeccCC-CcccCCCcEEEEEEecCCCc-EEEEEECCccccccccccccCCcccEEEECCCCHHHCeEEEEEEECCC
Confidence 5788887776 48899999999999988765 6999999987631 11345555443 48999999875522
Q ss_pred -------cceeEEeecCCCCCCCccccCCcceeEecCCcEEEEEeeeeCCCCceEEEeCCEEecCCCCCceEEcC-CCCc
Q psy2441 98 -------SPLSVYSADKIPPGFPQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREMLPVDTSRNPRYNLLT-SGAP 169 (212)
Q Consensus 98 -------~~~~v~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~-~~~~ 169 (212)
..+.+.... .+..|.+...+ ...+.+|+.+.|.|.+.+. .+.+.|++++..+... ..++.... ....
T Consensus 82 ~g~~~~s~~~~l~V~~--~~~~p~i~~~~-~~~v~~G~~v~L~C~~~~~-~~~v~W~k~g~~~~~~-~~~~~~~~~~~~~ 156 (198)
T 1ugn_A 82 AGRSESSDPLELVVTG--AYIKPTLSAQP-SPVVNSGGNVTLQCDSQVA-FDGFILCKEGEDEHPQ-CLNSQPHARGSSR 156 (198)
T ss_dssp TEECCCCCCEEEEEEC--SSCCCEEEEES-CSEEETTCCEEEEEECSSC-CSEEEEEEC------C-EEEC------CCE
T ss_pred CCcccCCccEEEEEcc--cccCCccccCC-ccccCCCCcEEEEEecCCC-CcEEEEEECCCccCCc-cccccccCCCcce
Confidence 122333221 11224444333 2567899999999999888 7899999999876432 11111111 1123
Q ss_pred eeEEEcCCCCCCCeeEEEEEEcccccc----eecceEEEEe
Q psy2441 170 GALQITNSIEEDQGKYECVAENEVGTE----YSPSTMLYVK 206 (212)
Q Consensus 170 ~~l~i~~~~~~d~g~y~C~a~n~~g~~----~~~~~~l~v~ 206 (212)
..|.|.+++.+|.|.|.|.|.|..+.. .+..+.|.|+
T Consensus 157 ~~L~i~~v~~~D~G~Y~C~a~n~~~~~~~s~~S~~~~l~V~ 197 (198)
T 1ugn_A 157 AIFSVGPVSPSRRWWYRCYAYDSNSPYEWSLPSDLLELLVL 197 (198)
T ss_dssp EEEEECCCCTTSCEEEEEEEECTTSTTEECCCCCCEEEEEE
T ss_pred eEEEecccCcccCeEEEEEEEeCCCCccccCcCceEEEEec
Confidence 789999999999999999999986532 2444676665
No 86
>3r4d_A CEA-related cell adhesion molecule 1, isoform 1/2; immunoglobulin, beta-sandwich, mceacam1A - immunoglobulin FO spike NTD - galectin-like beta-sandwich fold; HET: NAG; 3.10A {Mus musculus} PDB: 1l6z_A*
Probab=99.88 E-value=2.5e-21 Score=133.88 Aligned_cols=170 Identities=17% Similarity=0.168 Sum_probs=117.2
Q ss_pred EeCCCccEEeeCCeEEEEcccCCCCCCcEEEEeCCEEecC-----------------CCCC--------eeEEeec--CC
Q psy2441 33 TEAPSTKVVEISHTTVLHCSASGNPPPKISWIREMLPVDT-----------------SRNP--------RYNLLTS--GA 85 (212)
Q Consensus 33 ~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~k~g~~l~~-----------------~~~~--------~~~~~~~--~~ 85 (212)
.+.+....+.+|+++.|.|...+.+.+.+.|||++..... .... .+.+... .|
T Consensus 3 ~i~~~~~~v~~G~~v~L~C~~~~~~~~~v~W~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~r~~~~~~~~L~i~~v~~~D 82 (208)
T 3r4d_A 3 TIEAVPPQVAEDNNVLLLVHNLPLALGAFAWYKGNTTAIDKEIARFVPNSNMNFTGQAYSGREIIYSNGSLLFQMITMKD 82 (208)
T ss_dssp EEEEESSEEETTCCEEEEEECCCSSCSEEEEEESSCCCGGGEEEEEEGGGTEEEECTTCCSSEEECTTSCEEECSCCGGG
T ss_pred cccCccceeecCCcEEEEEeCCCCCceEEEeccCCCCCccceEEEEecCCCccccCccccceeEEecCCeEEEccccccC
Confidence 3445567899999999999988888889999997532111 0011 2333332 48
Q ss_pred CCeEEEeeeCCc-c--ceeEEeecCCCCCCCccccCCcceeEecCCcEEEEEeeeeCCCCceEEEeCCEEecCCCCCceE
Q psy2441 86 PGTYIKIKPNLF-S--PLSVYSADKIPPGFPQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREMLPVDTSRNPRYN 162 (212)
Q Consensus 86 ~g~~l~i~~~~~-~--~~~v~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~ 162 (212)
.|.|.|...... . ...+...+..++..|.+...... +..|+.+.|.|.+.+.| |.+.|++++..+... .++.
T Consensus 83 ~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~p~i~~~~~~--~~~g~~v~l~C~~~~~p-p~i~W~~~g~~l~~~--~~~~ 157 (208)
T 3r4d_A 83 MGVYTLDMTDENYRRTQATVRFHVHQPVTQPFLQVTNTT--VKELDSVTLTCLSNDIG-ANIQWLFNSQSLQLT--ERMT 157 (208)
T ss_dssp CEEEEEEEECSSCEEEEEEEEEEEECCCCCCEEEESCSS--CCTTCCEEEEEECSCTT-CEEEEEETTEECCCC--SSEE
T ss_pred CeEEEEEEEcccCceeEEEEEEEeccCCCCCEEecCCce--EeeCCCEEEEEECCCCC-CceEEEECCEeCCCC--CCeE
Confidence 889999877632 1 11111111122233444444333 77899999999999876 799999999988764 5555
Q ss_pred EcCCCCceeEEEcCCCCCCCeeEEEEEEcccccceecceEEEEecce
Q psy2441 163 LLTSGAPGALQITNSIEEDQGKYECVAENEVGTEYSPSTMLYVKGTQ 209 (212)
Q Consensus 163 ~~~~~~~~~l~i~~~~~~d~g~y~C~a~n~~g~~~~~~~~l~v~~~~ 209 (212)
...++ ..|.|.++..+|.|.|+|.|.|..|...+..++|.|...+
T Consensus 158 ~~~~~--~~L~i~~v~~~d~G~Y~C~a~N~~g~~~s~~~~l~v~~~~ 202 (208)
T 3r4d_A 158 LSQNN--SILRIDPIKREDAGEYQCEISNPVSVRRSNSIKLDIIFDP 202 (208)
T ss_dssp EETTT--TEEEESSCCGGGCEEEEEEEECTTCCEECCCEEECCC---
T ss_pred EcCCC--CEEEEeccCHHhCeEEEEEEecCCCcccCCceeeeEEeCC
Confidence 55543 7899999999999999999999999998876777766543
No 87
>2wng_A Tyrosine-protein phosphatase non-receptor type substrate 1; signal regulatory protein alpha, immunoglobulin superfamily, phosphoprotein; HET: NAG; 2.49A {Homo sapiens}
Probab=99.88 E-value=2.1e-22 Score=148.70 Aligned_cols=193 Identities=17% Similarity=0.230 Sum_probs=115.6
Q ss_pred ceeeEEEeeccCCCcce----ecccccC---CCCCeEEeCCCccEEeeCCeEEEEcccCCCCCC--cEEEEeCCEEecCC
Q psy2441 3 IGTYIKIKPNLFSPLSV----YSADKIP---PGFPQITEAPSTKVVEISHTTVLHCSASGNPPP--KISWIREMLPVDTS 73 (212)
Q Consensus 3 ~g~Y~C~~~~~~~~~~~----~~~~~~~---~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~--~v~W~k~g~~l~~~ 73 (212)
+|.|+|.+.|..+.... ....+.+ ..+|.+. .+ ...+.+|+.+.|.|.+.+.|++ .+.|+|+|.++...
T Consensus 86 ~G~Y~C~a~n~~~~~~~~~~~~~~~l~V~~~p~~p~i~-~~-~~~~~~g~~~~l~C~~~g~p~~~~~v~W~k~g~~l~~~ 163 (327)
T 2wng_A 86 AGTYYCVKFRKGSPDTEFKSGAGTELSVRAKPSAPVVS-GP-AARATPQHTVSFTCESHGFSPRDITLKWFKNGNELSDF 163 (327)
T ss_dssp CEEEEEEEEESSTTCEEEEECCCEEEEEEBCCCCCEEE-CC-SSCBCTTCEEEEEEEEEEEBSSCCEEEEEETTEECCCE
T ss_pred CeEEEEEeecCCCcceeEeecCcEEEEEEecCCCceee-cc-ccccCCCCEEEEEEEEeCccCCCcEEEEEECCEEcccc
Confidence 59999999997654110 1122333 2333433 33 4677899999999999887765 89999999888643
Q ss_pred C--------CCeeEE------ee--cCCCCeEEEeeeCCccc---eeEEeecC-CCCCCCccccCCcceeEecCCcEEEE
Q psy2441 74 R--------NPRYNL------LT--SGAPGTYIKIKPNLFSP---LSVYSADK-IPPGFPQITEAPSTKVVEISHTTVLH 133 (212)
Q Consensus 74 ~--------~~~~~~------~~--~~~~g~~l~i~~~~~~~---~~v~~~~~-~~~~~p~~~~~~~~~~~~~g~~~~l~ 133 (212)
. ...+.+ .. .++.|.|.|...+.... +....... ....+|.+...+.. +.+|+.+.|.
T Consensus 164 ~~~~~~~~~~~~~~~~s~L~i~~~~~d~~g~Y~C~a~n~~~~~~~~~~~~~~~~~v~~~P~i~~~~~~--~~~G~~v~l~ 241 (327)
T 2wng_A 164 QTNVDPVGESVSYSIHSTAKVVLTREDVHSQVICEVAHVTLQGDPLRGTANLSETIRVPPTLEVTQQP--VRAENQVNVT 241 (327)
T ss_dssp EEEEECSSCCSCEEEEEEEEEECCTTGGGCEEEEEEECTTSCSCCEEEEEEGGGTBCBCCEEEEEEEC--CSSTTCCEEE
T ss_pred ccccccccCCCceEEEEEEEEechhcCcCceEEEEEeccccCCCcccceEEeccccCCCCEEEEecCC--cCCCCcEEEE
Confidence 1 122222 11 12468999988763221 22211111 11223555443333 6689999999
Q ss_pred EeeeeC-CCC-ceEEEeCCEEecCCCCCceEEcCCCC---ceeEEEcCCCCCCCeeEEEEEEcccccceec
Q psy2441 134 CSASGN-PPP-KISWIREMLPVDTSRNPRYNLLTSGA---PGALQITNSIEEDQGKYECVAENEVGTEYSP 199 (212)
Q Consensus 134 C~~~~~-p~~-~i~W~~~~~~~~~~~~~~~~~~~~~~---~~~l~i~~~~~~d~g~y~C~a~n~~g~~~~~ 199 (212)
|.+.+. |++ .+.|+++|..+.......+....++. ...|.|.++..+|.|.|+|.|.|..|.....
T Consensus 242 C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~~~~~s~ 312 (327)
T 2wng_A 242 CQVRKFYPQRLQLTWLENGNVSRTETASTVTENKDGTYNWMSWLLVNVSAHRDDVKLTCQVEHDGQPAVSK 312 (327)
T ss_dssp EEEEEEBSSCEEEEEEETTEEEEEEECCSCEECTTSCEEEEEEEEC-------CCEEEEEEEETTCCCEEE
T ss_pred EEEccccCCCcEEEEEECCeEccCcccCceEECCCCcEEEEEEEEEccccccCCCEEEEEEEeCCCCCchh
Confidence 999995 444 89999999987653112222222221 1468888999999999999999999877655
No 88
>1z7z_I Intercellular adhesion molecule-1; ICAM-1,kilifi,CD54,human coxsackievirus A21, cryo-electron microscopy,virus-receptor complex, icosahedral virus; HET: NAG NDG; 8.00A {Homo sapiens} SCOP: b.1.1.3 b.1.1.3 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.88 E-value=2.3e-22 Score=154.51 Aligned_cols=175 Identities=15% Similarity=0.155 Sum_probs=113.9
Q ss_pred ce--eeEEEeeccCCCcceecccccC--CCCCeEEeCCCccEEeeCCeEEEEcccCCCCCCcEEEEeCCEEec-CCCCCe
Q psy2441 3 IG--TYIKIKPNLFSPLSVYSADKIP--PGFPQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREMLPVD-TSRNPR 77 (212)
Q Consensus 3 ~g--~Y~C~~~~~~~~~~~~~~~~~~--~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~k~g~~l~-~~~~~~ 77 (212)
.| .|+|.+.|..+..... ..+.+ ..+|.+... ...+.+|+.+.|.|.+. |.+.++| +|.++. ......
T Consensus 256 ~G~~~Y~C~a~n~~g~~~~~-~~l~V~~~~~p~i~~~--~~~v~~G~~v~l~C~~~--p~p~i~W--~g~~~~~~~~~~~ 328 (450)
T 1z7z_I 256 EGTQRLTCAVILGNQSQETL-QTVTIYSFPAPNVILT--KPEVSEGTEVTVKCEAH--PRAKVTL--NGVPAQPLGPRAQ 328 (450)
T ss_dssp CEEEEEEEEEEETTEEEEEE-EEEEEECCCCCEEEES--CSEEETTCEEEEEEEC--------------------CCCCC
T ss_pred CCcEEEEEEEccCCccEEEE-EEEEEecCCCCeEecC--CeeEeCCCcEEEEEecC--CCCEeEE--CCEEcCCCCceEE
Confidence 57 9999999987765433 23333 335666543 45899999999999997 8889999 887772 222233
Q ss_pred eEEeec--CCCCeEEEeeeC----------CccceeEEeecCCCCCCCccccCC--cceeEecCCcEEEEEeeeeCCCCc
Q psy2441 78 YNLLTS--GAPGTYIKIKPN----------LFSPLSVYSADKIPPGFPQITEAP--STKVVEISHTTVLHCSASGNPPPK 143 (212)
Q Consensus 78 ~~~~~~--~~~g~~l~i~~~----------~~~~~~v~~~~~~~~~~p~~~~~~--~~~~~~~g~~~~l~C~~~~~p~~~ 143 (212)
+.+... +|.|.|.|...+ ....+.|... |.+...+ ....+.+|+.+.|.|.+.|+|.|.
T Consensus 329 L~i~~~~~~d~G~Y~C~a~n~~~g~~~~~~~~~~l~V~~~-------P~~~~~~~p~~~~~~~g~~~~l~C~~~g~P~p~ 401 (450)
T 1z7z_I 329 LLLKATPEDNGRSFSCSATLEVAGQLIHKNQTRELRVLYG-------PRLDERDCPGNWTWPENSQQTPMCQAWGNPLPE 401 (450)
T ss_dssp EEEECCGGGTTCEEEEEEEEEETTEEEEEEEEEECEEEEE-------EECCSTTSCSEEEEETTCEECCCCCCEEESCCE
T ss_pred EEEecCcccCCceEEEEEEcCCCCcccccceeEEEEEecC-------CceeeccCCCceeEcCCCeEEEEEecccCCCCc
Confidence 444433 589999998864 1223444432 4444333 556788999999999999999999
Q ss_pred eEEEeCCEEecCCCCCceEEcCCCCceeEEEcCCCCCCCeeEEEEEEcccccceecceEEEEec
Q psy2441 144 ISWIREMLPVDTSRNPRYNLLTSGAPGALQITNSIEEDQGKYECVAENEVGTEYSPSTMLYVKG 207 (212)
Q Consensus 144 i~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~n~~g~~~~~~~~l~v~~ 207 (212)
+.|++++..+... + ..+ +++.+|+|.|.|.|.|..|..... +.|.|..
T Consensus 402 i~W~~~g~~~~~~----------g--~~~---~v~~~d~G~Y~C~a~N~~G~~~~~-~~l~V~~ 449 (450)
T 1z7z_I 402 LKCLKDGTFPLPI----------G--ESV---TVTRDLEGTYLCRARSTQGEVTRE-VTVNVLS 449 (450)
T ss_dssp EEEEETTTEECCT----------T--SCE---ECCGGGCEEEEEEEEETTEEEEEE-EEEEEEC
T ss_pred EEEEECCcccCCC----------C--CeE---eEehhhCeEEEEEEEeCCCceeEE-EEEEEEc
Confidence 9999998743321 1 222 578899999999999999999887 8888865
No 89
>2rcj_C Light chain; immunoglobulin M, polymeric antibodies, immunology, X-RAY solution scattering, constrained modelling, immune system; NMR {Homo sapiens}
Probab=99.88 E-value=1.8e-21 Score=152.21 Aligned_cols=194 Identities=18% Similarity=0.180 Sum_probs=123.9
Q ss_pred ceeeEEEeeccCCCcceecccc---cCCCCCeEEeCCCccEEeeCCeEEEEcccCCC-CCC-cEEEEeCCEEecCCC---
Q psy2441 3 IGTYIKIKPNLFSPLSVYSADK---IPPGFPQITEAPSTKVVEISHTTVLHCSASGN-PPP-KISWIREMLPVDTSR--- 74 (212)
Q Consensus 3 ~g~Y~C~~~~~~~~~~~~~~~~---~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~-p~~-~v~W~k~g~~l~~~~--- 74 (212)
.|.|+|.+.|..+......... ....+|.+...+....+.+|+.+.|.|.+.+. |.+ .|+|+|+|..+....
T Consensus 190 ~G~Y~C~a~n~~~~~~~~~~~~~~~~~~~~P~v~~~~~~~~~~~G~~~~l~C~~~g~~P~p~~v~W~k~g~~~~~~~~~~ 269 (523)
T 2rcj_C 190 HRSYSCQVTHEGSTVEKTVAPTECSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPQPVTVSWNSGALTSGVHTFPA 269 (523)
T ss_pred CceEEEEEEecCcccccceeeeecCCCCcCCEEEecCCCcccccCCceEEEEEEeceeCCCeEEEEecCCcccceEeCCc
Confidence 5899999999877644332211 22466776644444567899999999999886 777 899999997653210
Q ss_pred ----CC------eeEEeec--CCCCeEEEeeeCCccceeEEeecCCCCCCCcc-ccCCccee-EecCCcEEEEEeeeeCC
Q psy2441 75 ----NP------RYNLLTS--GAPGTYIKIKPNLFSPLSVYSADKIPPGFPQI-TEAPSTKV-VEISHTTVLHCSASGNP 140 (212)
Q Consensus 75 ----~~------~~~~~~~--~~~g~~l~i~~~~~~~~~v~~~~~~~~~~p~~-~~~~~~~~-~~~g~~~~l~C~~~~~p 140 (212)
.. .+.+... +| |.|.|.+.+......+.....+. ..|.+ ...+.... +.+|+.+.|.|.+.+.|
T Consensus 270 ~~~~~g~~~~~s~L~i~~~~~~d-G~Y~C~a~n~~g~~~~~~~l~v~-~~P~~~~~~p~~~~~v~~g~~~~l~C~~~g~~ 347 (523)
T 2rcj_C 270 VLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKRVEPL-SLPSVFLFPPKPKDTLMISRTPEVTCVVVDVS 347 (523)
T ss_pred EecCCCcEEEEEEEEechhhcCC-ceEEEEEEeCCCCcceEEecCCC-cCceEEecCCCchhhcccCCceEEEEEEeccc
Confidence 11 2233222 36 99999888733322222111111 11333 33333333 67899999999999865
Q ss_pred C----CceEEEeCCEEecCCCCCceEEcCCCC---ceeEEEcCCCCCCCeeEEEEEEccccccee
Q psy2441 141 P----PKISWIREMLPVDTSRNPRYNLLTSGA---PGALQITNSIEEDQGKYECVAENEVGTEYS 198 (212)
Q Consensus 141 ~----~~i~W~~~~~~~~~~~~~~~~~~~~~~---~~~l~i~~~~~~d~g~y~C~a~n~~g~~~~ 198 (212)
+ +.|.|++++..+............++. .+.|.|.++..+|.|.|+|.|.|..+....
T Consensus 348 p~~~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~ 412 (523)
T 2rcj_C 348 HEDPQVKFNWYVDGVQVHNAKTKPREQQYNSTYRVVSVLTVLHQNWLDGKEYKCKVSNKALPAPI 412 (523)
T ss_pred CCCCceEEEEEECCeEccCCccCCceecCCCcEEEEEEEEECHHHhcCCCeEEEEEeCCCCCCce
Confidence 3 499999999988654211111111111 246889999999999999999998776543
No 90
>2wim_A N-CAM 2, NCAM2, neural cell adhesion molecule 2; cell membrane, transmembrane, immunoglobulin; HET: NDG NAG; 3.00A {Homo sapiens}
Probab=99.88 E-value=2.7e-21 Score=140.32 Aligned_cols=171 Identities=21% Similarity=0.340 Sum_probs=120.2
Q ss_pred CCCeEEeCCCccEEeeCCeEEEEcccCCCCCCcEEEEe-CCEEecCCCCCee-----------EEeec--CCCCeEEEee
Q psy2441 28 GFPQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIR-EMLPVDTSRNPRY-----------NLLTS--GAPGTYIKIK 93 (212)
Q Consensus 28 ~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~k-~g~~l~~~~~~~~-----------~~~~~--~~~g~~l~i~ 93 (212)
.+|.+...+.+..+.+|+.+.|.|.+.+.|. .+.|+| +|..+... .++ .+... +|.|.|.|..
T Consensus 3 ~~p~v~~~~~~~~v~~G~~v~l~C~~~~~p~-~v~W~~~~g~~~~~~--~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~~ 79 (291)
T 2wim_A 3 ALLQVTISLSKVELSVGESKFFTCTAIGEPE-SIDWYNPQGEKIIST--QRVVVQKEGVRSRLTIYNANIEDAGIYRCQA 79 (291)
T ss_dssp CCCEEEESCSEEEEETTCCEEEEEEEESCCS-EEECBCTTCCBCCCB--TTEEEEEETTEEEEEECSCCGGGCEEEEEEE
T ss_pred CCceEEEeccceEecCCCcEEEEEEEeCCCC-ceEEECCCCcCccCC--CcEEEecCCCEEEEEEccCCcccCEEEEEEE
Confidence 5789999999999999999999999998775 899999 67666543 332 22222 3788888887
Q ss_pred eCCccc---eeEEeecCCCCCCCccccCCcceeEecCCcEEEEEeeeeCCCCceEEEeCCEEecCCCCCceEEcCCCCce
Q psy2441 94 PNLFSP---LSVYSADKIPPGFPQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREMLPVDTSRNPRYNLLTSGAPG 170 (212)
Q Consensus 94 ~~~~~~---~~v~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~ 170 (212)
...... ..+..... .+|.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+......++....+ .
T Consensus 80 ~n~~g~~~~~~~~l~v~---~~~~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~---~ 153 (291)
T 2wim_A 80 TDAKGQTQEATVVLEIY---QKLTFREVVSPQEFKQGEDAEVVCRVSSSPAPAVSWLYHNEEVTTISDNRFAMLAN---N 153 (291)
T ss_dssp ECSSSCEEEEEEEEEEE---CCCBCCSCCCSEEEETTSCEEECCCCBCSSCCEEEEECC----CBCCCSSEEECTT---S
T ss_pred ecccCceEEEEEEEEec---CCcceEeCCCChhhcCCCCEEEEEEEccCCCCEEEEEECCccccccCCceEEEccC---C
Confidence 662221 11111111 12455555566778899999999999999999999999998876543456666555 6
Q ss_pred eEEEcCCCCCCCeeEEEEEEccccccee-cceEEEEec
Q psy2441 171 ALQITNSIEEDQGKYECVAENEVGTEYS-PSTMLYVKG 207 (212)
Q Consensus 171 ~l~i~~~~~~d~g~y~C~a~n~~g~~~~-~~~~l~v~~ 207 (212)
.|.|.++..+|.|.|.|.+.|..+.... ..+.+.+..
T Consensus 154 ~L~i~~v~~~d~G~Y~C~~~n~~~~~~~~~~~~~~v~~ 191 (291)
T 2wim_A 154 NLQILNINKSDEGIYRCEGRVEARGEIDFRDIIVIVNV 191 (291)
T ss_dssp CEEETTCCGGGCEEEEEEEEETTTTEEEEEEEEEEEEB
T ss_pred CEEEEecchhhCEEEEEEEEECCCCeeEEeeEEEEecc
Confidence 8999999999999999999998754322 224555544
No 91
>3qs9_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, hematopoietic cytokine-receptor complex, cell surface, EXTR complex; 7.80A {Homo sapiens}
Probab=99.88 E-value=4.2e-22 Score=155.73 Aligned_cols=190 Identities=15% Similarity=0.136 Sum_probs=114.1
Q ss_pred ceeeEEEeeccCCCcceecccccCCCCCeEEeCCC--ccEEeeCCeEEEEcccCCCCCCcEEEEeCCEEecCCC-----C
Q psy2441 3 IGTYIKIKPNLFSPLSVYSADKIPPGFPQITEAPS--TKVVEISHTTVLHCSASGNPPPKISWIREMLPVDTSR-----N 75 (212)
Q Consensus 3 ~g~Y~C~~~~~~~~~~~~~~~~~~~~~p~~~~~~~--~~~v~~g~~v~l~C~~~~~p~~~v~W~k~g~~l~~~~-----~ 75 (212)
+|.|+|.+.|. ......+.+..+|.+...+. ...+.+|+.+.|.|.+.|+|.|.|+|+|+|.+|.... .
T Consensus 302 sG~Y~C~a~N~----~~~~~~L~V~~~p~i~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~i~W~k~g~~l~~~~~~~~~~ 377 (527)
T 3qs9_E 302 TGYYTCSSSKH----PSQSALVTIVEKGFINATNSSEDYEIDQYEEFCFSVRFKAYPQIRCTWTFSRKSFPCEQKGLDNG 377 (527)
T ss_dssp CEEEEEEETTE----EEEEEEEEEC--CEEECCCSCCEECCCTTCCCCEEEEEEEESCCEEEEEETTEEEECBCCBCSSS
T ss_pred CeEEEEEEEeC----CCceEEEEEEccCccccccCcccEEEcCCCeEEEEEEEEecCCCEEEEEECCEECcCCcccccCC
Confidence 59999999997 23334455567777765553 4567789999999999999999999999999886542 1
Q ss_pred CeeEEeec--CCCCeEEEeeeCCccce--eEEeecCCCCCCCccccCCcceeEecCCcEEEEEeeeeCCCCceEEEeCCE
Q psy2441 76 PRYNLLTS--GAPGTYIKIKPNLFSPL--SVYSADKIPPGFPQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREML 151 (212)
Q Consensus 76 ~~~~~~~~--~~~g~~l~i~~~~~~~~--~v~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~ 151 (212)
..+.+... +|.|.|.|.+.+..... .+...+. .+|.+...+ ....|.|.+.|.|.|.+.|++++.
T Consensus 378 ~~L~I~~v~~~D~G~YtC~A~N~~g~~~~~~~L~V~---~~P~i~~~~--------~~~~l~C~a~g~P~p~i~W~~~~~ 446 (527)
T 3qs9_E 378 YSISKFCNHKHQPGEYIFHAENDDAQFTKMFTLNIR---RKPQVLAEA--------SASQASCFSDGYPLPSWTWKKCSD 446 (527)
T ss_dssp SEEEEECCCTTCCSCEEEEEEETTEEEEEEEEEC-----CCCEEEECC--------CCE---EEEECSSCCEEEEECCC-
T ss_pred cEEEEecCCcccCEEEEEEEEeCCCcEEEEEEEEEe---cCCeEEEeC--------CCCEEEEEEEEEcCCeEEEEECCC
Confidence 23444433 58999999988733322 2222211 225554332 123579999999999999998765
Q ss_pred EecCCCCC----ceE-----EcCCCCceeEEEcCCCCCCCeeEEEEEEcccccceecceEEEEecc
Q psy2441 152 PVDTSRNP----RYN-----LLTSGAPGALQITNSIEEDQGKYECVAENEVGTEYSPSTMLYVKGT 208 (212)
Q Consensus 152 ~~~~~~~~----~~~-----~~~~~~~~~l~i~~~~~~d~g~y~C~a~n~~g~~~~~~~~l~v~~~ 208 (212)
........ .+. .........+.+.-...+|.|.|.|.|.|..|..... +.|.|..+
T Consensus 447 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~d~G~Y~C~A~N~~G~~~~~-~~L~V~~p 511 (527)
T 3qs9_E 447 KSPNCTEEITEGVWNRKANRKVFGQWVSSSTLNMSEAIKGFLVKCCAYNSLGTSCET-ILLNSPGP 511 (527)
T ss_dssp ----CCCCCCCCEEEC---------CEEEEECCCCCSSCSCEEEEEEECSSCEEEEE-EEC-----
T ss_pred CcCCCccccccccceeccccccCCceEEEEEEEEEEcCCCEEEEEEEEeCCCCceeE-EEEecCCC
Confidence 54221000 000 0000001223333334569999999999999999887 88877654
No 92
>1uct_A Immunoglobulin alpha FC receptor; beta stands, immune system; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1ovz_A* 1ow0_C*
Probab=99.88 E-value=4.2e-21 Score=133.90 Aligned_cols=172 Identities=15% Similarity=0.082 Sum_probs=116.4
Q ss_pred CCCCeEEeCCCccEEeeCCeEEEEcccCCCCCCcEEEEeCCEEecC--------CCCC--eeEEeec--CCCCeEEEeee
Q psy2441 27 PGFPQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREMLPVDT--------SRNP--RYNLLTS--GAPGTYIKIKP 94 (212)
Q Consensus 27 ~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~k~g~~l~~--------~~~~--~~~~~~~--~~~g~~l~i~~ 94 (212)
..+|.+...|. ..+.+|++++|.|.+.+ +.+.+.|||+|..+.. .... .+.+... .|.|.|.|...
T Consensus 7 ~~~P~i~~~p~-~~v~~G~~vtL~C~~~~-~~~~~~W~k~g~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~ 84 (218)
T 1uct_A 7 FPMPFISAKSS-PVIPLDGSVKIQCQAIR-EAYLTQLMIIKNSTYREIGRRLKFWNETDPEFVIDHMDANKAGRYQCQYR 84 (218)
T ss_dssp SCCCCEEESSC-SEEETTCCEEEEECCCT-TCSEEEEEEEETTEEEECSEECC----CCCEEEECSCCGGGCEEEEEEEE
T ss_pred CCCCEEEecCC-CccCCCCCEEEEEEcCC-CCCEEEEEECCCcccccccccCCCCcceeeEEEEcccccccCEEEEEEEE
Confidence 46788888777 57899999999999987 6788999999865421 1112 4555433 48999999877
Q ss_pred CCc------cceeEEeecCCCCCCCccccCCcceeEecCCcEEEEEeeeeCCCCceEEEeCCEEecCCCCCceEEcCCCC
Q psy2441 95 NLF------SPLSVYSADKIPPGFPQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREMLPVDTSRNPRYNLLTSGA 168 (212)
Q Consensus 95 ~~~------~~~~v~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~ 168 (212)
... ..+.+..... ...|.+...+ ...+.+|+.+.|.|.+.+.+.+.+.|++++..+... .. ... .
T Consensus 85 n~~~~~~~s~~~~l~V~~~--~~~P~i~~~p-~~~v~~G~~v~L~C~~~~~~~~~~~W~k~g~~~~~~---~~-~~~--~ 155 (218)
T 1uct_A 85 IGHYRFRYSDTLELVVTGL--YGKPFLSADR-GLVLMPGENISLTCSSAHIPFDRFSLAKEGELSLPQ---HQ-SGE--H 155 (218)
T ss_dssp ETTTEEEECCCEEEEEECS--SCCCEEEESS-CSEECTTCCCEEEEECSSSCCSEEEEEETTCSSCCS---EE-ECS--S
T ss_pred cCCCceeecCCEEEEEcCc--ccCCEEEeCC-CCccCCCCCEEEEEeCCCCCCCEEEEEECCCccccc---cc-CCC--c
Confidence 621 1222222211 1235555444 346789999999997777778899999998766531 11 111 1
Q ss_pred ceeEEEcCCCCCCCeeEEEEEEccc----ccceecceEEEEecce
Q psy2441 169 PGALQITNSIEEDQGKYECVAENEV----GTEYSPSTMLYVKGTQ 209 (212)
Q Consensus 169 ~~~l~i~~~~~~d~g~y~C~a~n~~----g~~~~~~~~l~v~~~~ 209 (212)
...|.|.+++.+|+|.|.|.|.|.. .+..++.+.|.|.+..
T Consensus 156 ~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~s~~S~~~~l~V~g~~ 200 (218)
T 1uct_A 156 PANFSLGPVDLNVSGIYRCYGWYNRSPYLWSFPSNALELVVTDSI 200 (218)
T ss_dssp SEEEECCSCCGGGCEEEEEEEECTTSTTEECCCCCCEEEEEC---
T ss_pred cCEEEEccCCcccCEEEEEEEEcCCCCCcCCCCCCcEEEEEecCC
Confidence 2799999999999999999999853 2334444788887653
No 93
>1qgc_4 Protein (immunoglobulin); virus-antibody complex, icosahedral virus, virus-immune SYST complex; 30.00A {Mus musculus} SCOP: i.6.1.1
Probab=99.88 E-value=4.8e-21 Score=146.63 Aligned_cols=189 Identities=16% Similarity=0.187 Sum_probs=123.2
Q ss_pred ceeeEEEeeccCCCcceecccccC---CCCCeEEeCCCccEEeeCCeEEEEcccCC-CCCC-cEEEEeCCEEecCC----
Q psy2441 3 IGTYIKIKPNLFSPLSVYSADKIP---PGFPQITEAPSTKVVEISHTTVLHCSASG-NPPP-KISWIREMLPVDTS---- 73 (212)
Q Consensus 3 ~g~Y~C~~~~~~~~~~~~~~~~~~---~~~p~~~~~~~~~~v~~g~~v~l~C~~~~-~p~~-~v~W~k~g~~l~~~---- 73 (212)
+|.|+|.+.|..+........+.+ ..+|.+...+....+.+|+.+.|.|.+.+ .|.+ .|.|+|+|.++...
T Consensus 87 ~G~Y~C~a~n~~~~~~~~~~~l~V~~~~~~P~v~~~~~~~~~~~g~~~~l~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~ 166 (438)
T 1qgc_4 87 VATYYCQQSNEVPLTFGAGTKLDLKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNS 166 (438)
T ss_dssp CEEEEEEECSSTTCCBCCCEEEEECCCCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCEEEEEEETTEEECTTEEEE
T ss_pred CeeEEEEEecCCCccccCceeEEecCCCCCCEEEecCCChhhccCCceEEEEEEccccCCCcEEEEEECCEEcCCCceec
Confidence 599999999987643222222222 34777776444444457889999999977 6777 89999999887653
Q ss_pred ------CCC------eeEEeec--CCCCeEEEeeeCCccc--eeEEeecCCCCCCCccccCCcceeEecCCcEEEEEeee
Q psy2441 74 ------RNP------RYNLLTS--GAPGTYIKIKPNLFSP--LSVYSADKIPPGFPQITEAPSTKVVEISHTTVLHCSAS 137 (212)
Q Consensus 74 ------~~~------~~~~~~~--~~~g~~l~i~~~~~~~--~~v~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~ 137 (212)
... .+.+... +|.|.|.|...+.... +.+...... ++.....+....+.+|+.+.|.|.+.
T Consensus 167 ~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~~~~~~---~~~~~~~~~~~~v~~G~~v~L~C~~~ 243 (438)
T 1qgc_4 167 WTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNE---CEVMLVESGGGLVKPGGSLKLSCTAS 243 (438)
T ss_dssp EECCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEEETTCSSCEEEEEETTC----CCEEEEECCEEECTTCCEEEEEEEE
T ss_pred cccccCCCCcEEEEEEEEEeCcccCCCCeEEEEEEecccCCceeccccccc---ceeEEecCCceEEecCCcEEEEEEEc
Confidence 111 1223222 3789999988773332 333322111 12222334556788999999999999
Q ss_pred eCC--CCceEEEeC--CEEecC---------------CCCCceEEcCC--CCceeEEEcCCCCCCCeeEEEEEEcccc
Q psy2441 138 GNP--PPKISWIRE--MLPVDT---------------SRNPRYNLLTS--GAPGALQITNSIEEDQGKYECVAENEVG 194 (212)
Q Consensus 138 ~~p--~~~i~W~~~--~~~~~~---------------~~~~~~~~~~~--~~~~~l~i~~~~~~d~g~y~C~a~n~~g 194 (212)
+.| .+.+.|+++ +..+.. ....++....+ .....|.|.+++.+|+|.|.|.|.|..+
T Consensus 244 g~p~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~ 321 (438)
T 1qgc_4 244 GFIFNRCAMSWVRQTPEKRLEWVATISSGGTYTYYPDSVKGRFTISRDNAKNTLYLQMSSLRSADTAMYYCVRREDGG 321 (438)
T ss_dssp SSCGGGSCEEEEEEETTTEEEEEEEECTTSCCEECCGGGTTTEEEEEETTTTEEEEEECSCCGGGCCEEEEEECCSSS
T ss_pred ccccCCcEEEEEECCCCCCcEEEEEEeecCCceecCcccCCcEEEEeecCCCeEEEEECCCChhhCEEEEEEEEccCC
Confidence 988 679999986 433321 01234444322 2246899999999999999999999544
No 94
>1wio_A CD4, T-cell surface glycoprotein CD4; immunoglobulin fold, transmembrane, MHC lipoprotein, polymorphism; 3.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1 b.1.1.3 b.1.1.3 PDB: 1wip_A 1wiq_A 3t0e_E
Probab=99.87 E-value=1.8e-21 Score=145.62 Aligned_cols=189 Identities=12% Similarity=0.047 Sum_probs=126.0
Q ss_pred ceeeEEEeeccCCCcceecccccCCCCCeEEeCCCccEEeeCCeEEEEcccCCCCCCcEEEEeCCEEecCCCCCeeEEee
Q psy2441 3 IGTYIKIKPNLFSPLSVYSADKIPPGFPQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREMLPVDTSRNPRYNLLT 82 (212)
Q Consensus 3 ~g~Y~C~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~k~g~~l~~~~~~~~~~~~ 82 (212)
+|.|+|.+.|..+... +.+. .+...|. ..+.+|+.+.|.|.+.+.|.+.+.|+|+|..+... ...+.+..
T Consensus 79 ~G~Y~C~~~n~~~~~~-----l~V~---~~~~~~~-~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~-~~~L~i~~ 148 (363)
T 1wio_A 79 SDTYICEVEDQKEEVQ-----LLVF---GLTANSD-THLLQGQSLTLTLESPPGSSPSVQCRSPRGKNIQG-GKTLSVSQ 148 (363)
T ss_dssp CEEEEEEETTEEEEEE-----EEEE---EEEESSC-SSEESBSCEEEEEECCTTCCCCEEEECSSSCEEEE-SSEEEECS
T ss_pred CEEEEEEEEECCCcEE-----EEEE---eCCCCCc-eEEecCCCEEEEEEcCCCCCCeEEEEcCCCccccc-ceEEEEee
Confidence 5999999998754222 2221 1233333 46789999999999988999999999998654322 24455544
Q ss_pred c--CCCCeEEEeeeCCccceeEEeecCCCCCCCccccCCcceeEecCCcEEEEEeeee-----CCCCceEEEeCCEEecC
Q psy2441 83 S--GAPGTYIKIKPNLFSPLSVYSADKIPPGFPQITEAPSTKVVEISHTTVLHCSASG-----NPPPKISWIREMLPVDT 155 (212)
Q Consensus 83 ~--~~~g~~l~i~~~~~~~~~v~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~-----~p~~~i~W~~~~~~~~~ 155 (212)
. +|.|.|.|................+. .+|. .+....+.+|+.+.|.|.+.+ +|.|.+.|++++..+..
T Consensus 149 v~~~d~G~Y~C~a~~~~~~~~~~~~l~v~-~~p~---~~~~~~~~~G~~v~l~C~~~~~~~~~~P~p~i~W~~~g~~~~~ 224 (363)
T 1wio_A 149 LELQDSGTWTCTVLQNQKKVEFKIDIVVL-AFQK---ASSIVYKKEGEQVEFSFPLAFTVEKLTGSGELWWQAERASSSK 224 (363)
T ss_dssp BCGGGCEECEEEEEETTEEEEECCEECEE-CCSC---SEEEEEEETBCCEEEECCCCCCCCSSCEEEEEEEEESSCCCCC
T ss_pred CChhcCCEEEEEEecCCCeEEEEEEEEEe-cCCC---CCCceEEecCCEEEEEEEEecccccCCCceeEEEecCCCCccc
Confidence 3 48999999877632222111110000 1122 124466888999999998877 78889999999887655
Q ss_pred C------CCCceEEcC----------CCCceeEEEcCCCCCCCeeEEEEEEcc--cccceecceEEEEe
Q psy2441 156 S------RNPRYNLLT----------SGAPGALQITNSIEEDQGKYECVAENE--VGTEYSPSTMLYVK 206 (212)
Q Consensus 156 ~------~~~~~~~~~----------~~~~~~l~i~~~~~~d~g~y~C~a~n~--~g~~~~~~~~l~v~ 206 (212)
. ...++.... ......|.|.++..+|+|.|.|.|.|. .|..... +.|.|.
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~~~g~~~~~-~~l~V~ 292 (363)
T 1wio_A 225 SWITFDLKNKEVSVKRVTQDPKLQMGKKLPLHLTLPQALPQYAGSGNLTLALEAKTGKLHQE-VNLVVM 292 (363)
T ss_dssp CEEEEEECSSCEEEEEEECSSCCBCCSSSSCEEEESSBCGGGCEEEEEEECBTTTTCCEEEE-EEEEEE
T ss_pred eEEEEEecCCeeeccccccchhhhcccCCceEEEEccCCcCcCcEEEEEEEEhhhcCeEEEE-EeEEEE
Confidence 1 023332211 221359999999999999999999999 8877666 666665
No 95
>1z7z_I Intercellular adhesion molecule-1; ICAM-1,kilifi,CD54,human coxsackievirus A21, cryo-electron microscopy,virus-receptor complex, icosahedral virus; HET: NAG NDG; 8.00A {Homo sapiens} SCOP: b.1.1.3 b.1.1.3 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.87 E-value=1e-20 Score=145.27 Aligned_cols=195 Identities=12% Similarity=0.130 Sum_probs=130.2
Q ss_pred ceeeEEEeeccCCCcceecccccCCCCCeEE-eCCCccEEeeCCeEEEEcccCCCCCC---cEEEEeCCEEecCCC----
Q psy2441 3 IGTYIKIKPNLFSPLSVYSADKIPPGFPQIT-EAPSTKVVEISHTTVLHCSASGNPPP---KISWIREMLPVDTSR---- 74 (212)
Q Consensus 3 ~g~Y~C~~~~~~~~~~~~~~~~~~~~~p~~~-~~~~~~~v~~g~~v~l~C~~~~~p~~---~v~W~k~g~~l~~~~---- 74 (212)
.| |+|.+.+..+... ....+.+..+|.+. ..+.+..+.+|+.+.|.|.+.+.|++ .|.|||+|.++....
T Consensus 61 ~g-Y~C~a~~~~~~~~-~~~~l~V~~~P~~~~~~~~~~~v~~G~~v~L~C~~~g~~~~~~~~v~W~k~g~~l~~~~~~~~ 138 (450)
T 1z7z_I 61 SQ-PMCYSNCPDGQST-AKTFLTVYWTPERVELAPLPSWQPVGKNLTLRCQVEGGAPRANLTVVLLRGEKELKREPAVGE 138 (450)
T ss_dssp BC-CEEEEEETTEEEE-EECEEEEEBCCSEEEECCCCSEECTTSEEEEEEEEECCBCGGGEEEEEEETTEEEEEEECCTT
T ss_pred Ce-eEEEEeCCCCcce-eEEEEEEEeCCCcceecCCCceEeeCCeEEEEEEecCCCCCcCcEEEEeeCCEEeeccccccc
Confidence 36 9999975443322 23444444466555 67778899999999999999998887 899999998875431
Q ss_pred --CCeeEEeec--CCCCeEEEeeeCCc--------------cceeEEeecCCCCCCCccccCCcceeEecCCcEEEEEee
Q psy2441 75 --NPRYNLLTS--GAPGTYIKIKPNLF--------------SPLSVYSADKIPPGFPQITEAPSTKVVEISHTTVLHCSA 136 (212)
Q Consensus 75 --~~~~~~~~~--~~~g~~l~i~~~~~--------------~~~~v~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~ 136 (212)
...+.+... +|.|.|.|...+.. ..+.++.. +..+|.+... ..+.+|+.+.|.|.+
T Consensus 139 ~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~~~s~~~~l~v~~~---~~~~p~~~~~---~~v~~G~~v~l~C~~ 212 (450)
T 1z7z_I 139 PAEVTTTVLVRRDHHGANFSCRTELDLRPQGLELFENTSAPYQLQTFVL---PATPPQLVSP---RVLEVDTQGTVVCSL 212 (450)
T ss_dssp TEEEEEEEECCSSCSSCEEEEEEEEECGGGTSCEEEEECCCEECEECCC---CSSCCEEECC---SEEETTSEEEEEEEE
T ss_pred ccceEEEEEeeccccCceEEEEEEcccCCCCceEEeeccCccceeeecc---CCCCCEecCc---eeEEeCCcEEEEEEe
Confidence 123444332 47899999887521 11222211 1112322211 568899999999999
Q ss_pred eeC-C--CCceEEEeCCEEecCCCCCceEEcCCCCceeEEEcCCCCCCCe--eEEEEEEcccccceecceEEEEecceec
Q psy2441 137 SGN-P--PPKISWIREMLPVDTSRNPRYNLLTSGAPGALQITNSIEEDQG--KYECVAENEVGTEYSPSTMLYVKGTQVD 211 (212)
Q Consensus 137 ~~~-p--~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g--~y~C~a~n~~g~~~~~~~~l~v~~~~~p 211 (212)
.+. | .+.+.|++++..+.. ++....+.....+.+ ++..+|.| .|.|.|.|..|..... +.|.|.+.+.|
T Consensus 213 ~g~~P~~~~~~~W~~~~~~~~~----~~~~~~~~~~~~~~~-~v~~~d~G~~~Y~C~a~n~~g~~~~~-~~l~V~~~~~p 286 (450)
T 1z7z_I 213 DGLFPVSEAQVHLALGDQRLNP----TVTYGNDSFSAKASV-SVTAEDEGTQRLTCAVILGNQSQETL-QTVTIYSFPAP 286 (450)
T ss_dssp ESCTTGGGCEEEEEETTEECCC----EEEEETTEEEEEEEE-ECCGGGCEEEEEEEEEEETTEEEEEE-EEEEEECCCCC
T ss_pred eCCCCCCceEEEEeCCCEeCCc----eEEecCCceeEEEEE-EeEhhhCCcEEEEEEEccCCccEEEE-EEEEEecCCCC
Confidence 998 7 689999999988764 222222210111222 67899999 9999999999888776 88888764433
No 96
>3vh8_G Killer cell immunoglobulin-like receptor 3DL1; immunoglobulin fold, natural killer cell receptor, immune SY; HET: NAG; 1.80A {Homo sapiens} PDB: 1im9_D
Probab=99.87 E-value=2.4e-21 Score=142.42 Aligned_cols=198 Identities=17% Similarity=0.227 Sum_probs=116.3
Q ss_pred ceeeEEEeeccCCCc----ceecccccC---CCCCeEEeCCCccEEeeCCeEEEEcccCCCCCCcEEEEeCCEEecCC--
Q psy2441 3 IGTYIKIKPNLFSPL----SVYSADKIP---PGFPQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREMLPVDTS-- 73 (212)
Q Consensus 3 ~g~Y~C~~~~~~~~~----~~~~~~~~~---~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~k~g~~l~~~-- 73 (212)
+|.|+|.+.+..... ......+.+ ..+|.+...+... +.+|+.++|.|.+.+ +++.+.|+|+|..+...
T Consensus 86 ~G~Y~C~a~~~~~~~~~~~~s~~~~l~V~~~~~~p~~~~~~~~~-v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~~~ 163 (316)
T 3vh8_G 86 AGNYTCRGSHPHSPTGWSAPSNPVVIMVTGNHRKPSLLAHPGPL-VKSGERVILQCWSDI-MFEHFFLHKEGISKDPSRL 163 (316)
T ss_dssp CEEEEEEEBCSSSSSSBCCCCCCEEEEEECSSCCCEEEEESCSE-EETTCCEEEEEEESS-CCSEEEEEETTCCSCCEEE
T ss_pred CeEEEEEEEcCCCCcceecCCCcEEEEEecCCCCCeEEecCCCc-cCCCCeEEEEEcCCC-CCcEEEEEECCCcccccee
Confidence 699999988643321 111122222 3467776666554 889999999999954 56689999998766321
Q ss_pred --------CCCeeEEeec--CCCCeEEEeeeCC---------ccceeEEeecCCCCCCCccccCCcceeEecCCcEEEEE
Q psy2441 74 --------RNPRYNLLTS--GAPGTYIKIKPNL---------FSPLSVYSADKIPPGFPQITEAPSTKVVEISHTTVLHC 134 (212)
Q Consensus 74 --------~~~~~~~~~~--~~~g~~l~i~~~~---------~~~~~v~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C 134 (212)
....+.+... +|.|.|.|...+. ...+.+.... ...+|.+...+.. .+.+|+.+.|.|
T Consensus 164 ~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~s~~s~~~~l~V~~--~~~~p~i~~~~~~-~v~~G~~v~L~C 240 (316)
T 3vh8_G 164 VGQIHDGVSKANFSIGPMMLALAGTYRCYGSVTHTPYQLSAPSDPLDIVVTG--PYEKPSLSAQPGP-KVQAGESVTLSC 240 (316)
T ss_dssp ECEEETTEEEEEEEECSCCGGGCEEEEEEEECTTCTTBCCCCCCCEEEEEEC--SSCCCEEEEESCS-CCCTTSCCEEEE
T ss_pred eeeecCCCceEEEEECCCChhhCceEEEEEecCCCCccccCCCCCEEEEecC--CCCCCeEEeCCCC-eecCCCcEEEEE
Confidence 0122333322 4889999998752 2223333322 1223555544433 567899999999
Q ss_pred eeeeCCCCceEEEeCCEEecCCCCCceEEcCCCCceeEEEcCCCCCCCeeEEEEEEccccc----ceecceEEEEecce
Q psy2441 135 SASGNPPPKISWIREMLPVDTSRNPRYNLLTSGAPGALQITNSIEEDQGKYECVAENEVGT----EYSPSTMLYVKGTQ 209 (212)
Q Consensus 135 ~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~n~~g~----~~~~~~~l~v~~~~ 209 (212)
.+. .|.+.+.|++++..+... ..............|.|.+++ |+|.|.|.|.|..+. ..+..+.|.|.+.+
T Consensus 241 ~~~-~~~~~~~W~k~g~~~~~~-~~~~~~~~~~~~~~L~i~~v~--D~G~Y~C~a~n~~~~~~~s~~S~~~~l~V~g~p 315 (316)
T 3vh8_G 241 SSR-SSYDMYHLSREGGAHERR-LPAVRKVNRTFQADFPLGPAT--HGGTYRCFGSFRHSPYEWSDPSDPLLVSVTGNP 315 (316)
T ss_dssp EES-SCCSEEEEEETTSSCCEE-EECEECTTSCEEEEEECC-------CEEEEEEEBTTBTTEECCCCCCEEC------
T ss_pred ECC-CCCcEEEEEECCCcCCCc-eeceeccCCceeEEEEcCCcC--CCEEEEEEeecCCCchhccCCCCcEEEEEeCCC
Confidence 997 477899999998765432 001111111113689999999 999999999997654 33444777776543
No 97
>1sy6_A T-cell surface glycoprotein CD3 gamma/epsilon chain; CD3 epsilon, OKT3 FAB, signaling protein/antibiotic complex; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 2atp_E*
Probab=99.86 E-value=8.5e-21 Score=131.04 Aligned_cols=157 Identities=19% Similarity=0.280 Sum_probs=102.2
Q ss_pred EeeCCeEEEEcccCCCCCCcEEEEeCCEEecC--CCCCeeEEeec--CCCCeEEEeeeCC-ccceeEEeec--C------
Q psy2441 41 VEISHTTVLHCSASGNPPPKISWIREMLPVDT--SRNPRYNLLTS--GAPGTYIKIKPNL-FSPLSVYSAD--K------ 107 (212)
Q Consensus 41 v~~g~~v~l~C~~~~~p~~~v~W~k~g~~l~~--~~~~~~~~~~~--~~~g~~l~i~~~~-~~~~~v~~~~--~------ 107 (212)
+.+|+.++|.|.+ |.+.|.|+|+|..+.. .....+.+... +|.|.|.|..+.. ...+.+.... .
T Consensus 15 ~~~G~~v~L~C~~---p~~~i~W~k~g~~l~~~~~~~~~L~i~~v~~~DsG~Y~C~~~~~~s~~~~v~v~~~~~~~~~~~ 91 (204)
T 1sy6_A 15 YQEDGSVLLTCDA---EAKNITWFKDGKMIGFLTEDKKKWNLGSNAKDPRGMYQCKGSQNKSKPLQVYYRMGSADDAKKD 91 (204)
T ss_dssp CCSSSEEEEEECS---CSSEEEEEETTEEEEEEESSCCCEEEEEGGGCCEEEEEEESSSSCCCCEEEEEEC---------
T ss_pred ecCCCeEEEEEcC---CCCEEEEEECCEECCCCCCCCCeEEeCCCCcCCCEEEEEEecCCCCeeEEEEEEEecccccccc
Confidence 3579999999999 7789999999988853 22345555543 5899999986542 2223333220 0
Q ss_pred -----------------C-CCCCCccccCCcceeEecCCcEEEEEeeeeCCCCceEEEeCCEEecCCCCCceEEcCCCCc
Q psy2441 108 -----------------I-PPGFPQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREMLPVDTSRNPRYNLLTSGAP 169 (212)
Q Consensus 108 -----------------~-~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~ 169 (212)
. ...++.+...+. ....+|+.+.|.|. +.|.|.+.|++++..+......+.....+
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~v~~~G~~v~L~C~--g~p~p~i~W~k~~~~l~~~~~~~~~~~~~--- 165 (204)
T 1sy6_A 92 AAKKDDAKKDDAKKDGSDGNEEMGGITQTPY-KVSISGTTVILTCP--QYPGSEILWQHNDKNIGGDEDDKNIGSDE--- 165 (204)
T ss_dssp ---------------------------CCCC-EEEEETTEEEEECS--CCCSSCEEEEETTEEESCCTTCTTEEEET---
T ss_pred ccccccccccccccccccccccccceecCCc-eeeecCCcEEEEcC--CCCCCceEEEECCEECCCccCCceEecCC---
Confidence 0 000122222221 22237999999999 78888999999999886541222222233
Q ss_pred eeEEEcCC-CCCCCeeEEEEEEcccccceecceEEEEe
Q psy2441 170 GALQITNS-IEEDQGKYECVAENEVGTEYSPSTMLYVK 206 (212)
Q Consensus 170 ~~l~i~~~-~~~d~g~y~C~a~n~~g~~~~~~~~l~v~ 206 (212)
..|.|.++ ..+|+|.|+|.|.|..|...+..+.|.++
T Consensus 166 ~~L~I~~v~~~~D~G~Y~C~A~N~~g~~~s~~l~l~~~ 203 (204)
T 1sy6_A 166 DHLSLKEFSELEQSGYYVCYPRGSKPEDANFYLYLRAR 203 (204)
T ss_dssp TEEEETTCCHHHHCEEEEEEETTSCGGGSSCEEEEEEC
T ss_pred CEEEEeeCCccccCEEEEEEeccCCCCceeEEEEEEEe
Confidence 79999999 99999999999999999643222444443
No 98
>1oll_A NK receptor; immune system/receptor, NK cell triggering receptor, immune system, IG domain, cytotoxicity, C2-type IG-like domains; 1.93A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.86 E-value=3e-20 Score=126.66 Aligned_cols=167 Identities=13% Similarity=0.109 Sum_probs=112.5
Q ss_pred CCCeEEeCCCccEEeeCCeEEEEcccCCCCCCcEEEEeCCEEecC--------CCCCeeEEeec--CCCCeEEEeeeCC-
Q psy2441 28 GFPQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREMLPVDT--------SRNPRYNLLTS--GAPGTYIKIKPNL- 96 (212)
Q Consensus 28 ~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~k~g~~l~~--------~~~~~~~~~~~--~~~g~~l~i~~~~- 96 (212)
.+|.+...|.. .+.+|++++|.|.+.+ +.+.+.|+|+|..+.. .....+.+... .|.|.|.|.....
T Consensus 3 ~~P~i~~~p~~-~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~ 80 (188)
T 1oll_A 3 PKPFIWAEPHF-MVPKEKQVTICCQGNY-GAVEYQLHFEGSLFAVDRPKPPERINKVKFYIPDMNSRMAGQYSCIYRVGE 80 (188)
T ss_dssp CCCEEEEESCS-EEETTCCEEEEEECCT-TCCEEEEEETTEEEEEECCSSCTTCCEEEEEESSCCGGGCEEEEEEEEETT
T ss_pred CCCEEEeecCC-cCCCCCCEEEEEecCC-CCCEEEEEECCCcccccccccCCCcceeEEEeCcCCcccCeEEEEEecCCC
Confidence 57888877776 8999999999999975 3468999999987641 11233444333 4899999987541
Q ss_pred -----ccceeEEeecCCCCCCCccccCCcceeEecCCcEEEEEeeeeCCCCceEEEeCCEEecCCCCCceEEcCCCCcee
Q psy2441 97 -----FSPLSVYSADKIPPGFPQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREMLPVDTSRNPRYNLLTSGAPGA 171 (212)
Q Consensus 97 -----~~~~~v~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (212)
...+.+...... ..|.+...+ ...+.+|+.+.|.|.+.+. .+.+.|++++..+... .... .....
T Consensus 81 ~~~~~s~~~~l~V~~~~--~~p~i~~~p-~~~v~~G~~v~L~C~~~~~-~~~~~w~k~g~~~~~~----~~~~--~~~~~ 150 (188)
T 1oll_A 81 LWSEPSNLLDLVVTEMY--DTPTLSVHP-GPEVISGEKVTFYCRLDTA-TSMFLLLKEGRSSHVQ----RGYG--KVQAE 150 (188)
T ss_dssp EECCCCCCEEEEEESCS--CCCEEEEES-CSEEETTCEEEEEEECSSS-CSEEEEEEESSSCEEE----EEEC--SSEEE
T ss_pred CCCCCCCceEEEecccC--CCCeEEECC-CCccccCCEEEEEEEcCCC-CCEEEEEECCcccccc----ccCC--CceeE
Confidence 222333322111 125555444 3457899999999998764 4689999988655431 1111 11278
Q ss_pred EEEcCCCCCCCeeEEEEEEccc--ccceecceEEEEe
Q psy2441 172 LQITNSIEEDQGKYECVAENEV--GTEYSPSTMLYVK 206 (212)
Q Consensus 172 l~i~~~~~~d~g~y~C~a~n~~--g~~~~~~~~l~v~ 206 (212)
|.|.+++.+|+|.|.|.|.|.. .+..++.+.|.|.
T Consensus 151 L~I~~v~~~d~G~Y~C~a~n~~~~~s~~S~~~~l~V~ 187 (188)
T 1oll_A 151 FPLGPVTTAHRGTYRCFGSYNNHAWSFPSEPVKLLVT 187 (188)
T ss_dssp EEEEECCGGGCEEEEEECEEETTEECCCCCCEEEEEE
T ss_pred EEECCCCcCCCcEEEEEEEcCCCcCCCCCCcEEEEec
Confidence 9999999999999999999864 2344444777765
No 99
>2c1o_A IGK-C protein; FAB fragment, enantioselective, finrozole, immune system, antibody, ENA11His antibody, immunoglobulin domain; 2.75A {Mus musculus}
Probab=99.86 E-value=6.6e-21 Score=135.85 Aligned_cols=186 Identities=15% Similarity=0.156 Sum_probs=105.4
Q ss_pred ceeeEEEeeccCCCcceecccccCCCCCeEEeCCCccEEeeCCeEEEEcccCCCC-----CCcEEEEeCC--EEe-----
Q psy2441 3 IGTYIKIKPNLFSPLSVYSADKIPPGFPQITEAPSTKVVEISHTTVLHCSASGNP-----PPKISWIREM--LPV----- 70 (212)
Q Consensus 3 ~g~Y~C~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p-----~~~v~W~k~g--~~l----- 70 (212)
+|.|+|.+. +... ....+.+..++.+...|..+.+.+|++++|.|.+.+.| .+.|.|||++ ..+
T Consensus 16 sg~Y~C~a~---g~~~-~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~g~~~~~~~~ 91 (254)
T 2c1o_A 16 SVKLSCKAS---GYSF-TNYWMNWLRELVMTQSPLTLSVTIGQPASISCKSSQSLLYSNGKTYLNWLLQRPGQSPKRLIY 91 (254)
T ss_dssp --------------------------CCCEEEECSEEEECTTSCEEEEEEESSCCBCSSSCBCEEEEEECTTSCCEEEEE
T ss_pred cEEEEEcCc---hhhh-hhhhhheeeceeEEeCCceEEecCCCcEEEEeeccCcccccCCCCceEEEEeCCCCCceEEEE
Confidence 589999998 2221 11223334577777888889999999999999998887 3789999842 221
Q ss_pred -----cCCCCCeeEE-----------eec--CCCCeEEEeeeCCcc-------ceeEEeecCCCCCCCccccCCcceeEe
Q psy2441 71 -----DTSRNPRYNL-----------LTS--GAPGTYIKIKPNLFS-------PLSVYSADKIPPGFPQITEAPSTKVVE 125 (212)
Q Consensus 71 -----~~~~~~~~~~-----------~~~--~~~g~~l~i~~~~~~-------~~~v~~~~~~~~~~p~~~~~~~~~~~~ 125 (212)
......|+.+ ... .|.|.|.|....... .+.|. ....+|.+...+......
T Consensus 92 ~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~l~V~----~~~~~P~v~~~~~~~~~~ 167 (254)
T 2c1o_A 92 LVSKLDSGDPDRFTGSGSGTDFTLKISRVEAEDLGIYYCVQGSHFPPTFGAGTKLELK----RADAAPTVSIFPPSSEQL 167 (254)
T ss_dssp TTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCSEEEEEECSSSSCEEBCCEEEEEC----CCCBCCEEEEECCCHHHH
T ss_pred eccccCCCccceEEEecCCCEEEEEECcCCcccCEEEEEEEEcCcceEecCCEEEEEC----CCCCCCeeEeecCChhhc
Confidence 1111233332 222 378889998766321 22232 111235555433332233
Q ss_pred cCCcEEEEEeeee-CCC-CceEEEeCCEEecCCCCCceEEcC--CCC---ceeEEEcCCCCCCCeeEEEEEEcccccc
Q psy2441 126 ISHTTVLHCSASG-NPP-PKISWIREMLPVDTSRNPRYNLLT--SGA---PGALQITNSIEEDQGKYECVAENEVGTE 196 (212)
Q Consensus 126 ~g~~~~l~C~~~~-~p~-~~i~W~~~~~~~~~~~~~~~~~~~--~~~---~~~l~i~~~~~~d~g~y~C~a~n~~g~~ 196 (212)
.|+.+.|.|.+.+ .|. +.+.|++++..+............ ++. .+.|.|.++..+|.|.|+|.|.|.....
T Consensus 168 ~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~g~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~ 245 (254)
T 2c1o_A 168 TSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTS 245 (254)
T ss_dssp HTTEEEEEEEEEEEBSSCCEEEEEESSSEECTTEEEEECCCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEECTTCSS
T ss_pred cCCcEEEEEEEecccCCCcEEEEEECCCcccCcceeccccccCCCCcEEEEEEEEeccccccCCCeEEEEEEcCCCCC
Confidence 5889999999988 444 469999999877643000111111 110 2689999999999999999999986543
No 100
>2fbo_J V1V2;, variable region-containing chitin-binding protein 3; immunoglobulin, VCBP, V-type, V SET, immune system; 1.85A {Branchiostoma floridae}
Probab=99.86 E-value=8.3e-21 Score=134.81 Aligned_cols=170 Identities=15% Similarity=0.152 Sum_probs=111.3
Q ss_pred EeCCCccEEeeCCeEEEEcccCC---CCCCcEEEEeCCEEec----------------------------CCCCC-----
Q psy2441 33 TEAPSTKVVEISHTTVLHCSASG---NPPPKISWIREMLPVD----------------------------TSRNP----- 76 (212)
Q Consensus 33 ~~~~~~~~v~~g~~v~l~C~~~~---~p~~~v~W~k~g~~l~----------------------------~~~~~----- 76 (212)
...+..+.+.+|+++.|.|.+.+ .|.+.+.|+|++.... .....
T Consensus 6 ~~~~~~v~v~~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 85 (250)
T 2fbo_J 6 RTTHTEVEVHAGGTVELPCSYQLANDTQPPVISWLKGASPDRSTKVFKGNYNWQGEGLGFVESDSYKESFGDFLGRASVA 85 (250)
T ss_dssp ECSCSEEEECTTSCEEECCEEEECSCCSCCEEEEEEEEETTEEEEEEEEEECCCBTTBCCCTTSEEEEECGGGTTTEECS
T ss_pred EcCCCceEEecCCeEEEEEEeEcCCCCCceEEEEEeCCCCCccEEEEeeccccccccccccccccccccCCCcCceEEec
Confidence 34555788999999999999976 7788999999874420 00011
Q ss_pred -----eeEEeec--CCCCeEEEeeeCCccc-------eeEEeecCCCCCCCcccc-CCcceeEecCCcEEEEEeeeeCCC
Q psy2441 77 -----RYNLLTS--GAPGTYIKIKPNLFSP-------LSVYSADKIPPGFPQITE-APSTKVVEISHTTVLHCSASGNPP 141 (212)
Q Consensus 77 -----~~~~~~~--~~~g~~l~i~~~~~~~-------~~v~~~~~~~~~~p~~~~-~~~~~~~~~g~~~~l~C~~~~~p~ 141 (212)
.+.+... +|.|.|.|........ ..+...+..++.+|.+.. .+....+.+|+.+.|.|.+.+.|.
T Consensus 86 ~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~v~~g~~v~L~C~~~g~p~ 165 (250)
T 2fbo_J 86 NLAAPTLRLTHVHPQDGGRYWCQVAQWSIRTEFGLDAKSVVLKVTGHTPSNNVHVSTAEVVQVDEGNDITMTCPCTDCAN 165 (250)
T ss_dssp CTTSCCEEECSCCGGGCEEEEEEEECTTCCSGGGEEEEEEEEEETTTSCCSCCEECCCSEEECCTTCCEEECCCEESCTT
T ss_pred cCCcceEEEeeCChhhCeEEEEEeccCccCCcccccceeEEEEEeccCCCCeEEEecCceEEecCCCcEEEEEEecCCCC
Confidence 2333332 4889999988772221 123332222222233333 334466778999999999999999
Q ss_pred CceEEEeCCEEecCCCCC----------------------ceEEcCCCCceeEEEcCCCCCCCeeEEEEEEcccccceec
Q psy2441 142 PKISWIREMLPVDTSRNP----------------------RYNLLTSGAPGALQITNSIEEDQGKYECVAENEVGTEYSP 199 (212)
Q Consensus 142 ~~i~W~~~~~~~~~~~~~----------------------~~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~n~~g~~~~~ 199 (212)
|.+.|++++..+...... +..... ...|.|.++..+|+|.|.|.|.|..|.....
T Consensus 166 p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~L~i~~v~~~D~G~Y~C~a~N~~g~~g~~ 242 (250)
T 2fbo_J 166 ANVTWYTGPTFFENYETGTYQPLANKNQFGITWFSSEIAGRASFSG---ARNLVIRAAKITDAGRVWCELATGQGELDAD 242 (250)
T ss_dssp CEEEEEEEEECSSCSSSCEEEEEEEECTTSCEEECTTTTTSEEEET---TTEEEECSCCGGGCEEEEEEEESSSSGGGEE
T ss_pred CeeEEEeCCCcccccccCcceeEeccCCCCccccCceEecccccCC---ccEEEEecCCcccCEEEEEEecCCccccCcc
Confidence 999999998876542111 111111 2689999999999999999999966654443
Q ss_pred ceEEEE
Q psy2441 200 STMLYV 205 (212)
Q Consensus 200 ~~~l~v 205 (212)
...+.+
T Consensus 243 ~~~~~l 248 (250)
T 2fbo_J 243 RSSTIL 248 (250)
T ss_dssp EEEEEE
T ss_pred ceeEEE
Confidence 234433
No 101
>2gi7_A GPVI protein; IG-like domains, blood clotting, cell adhesion; 2.40A {Homo sapiens}
Probab=99.85 E-value=7.6e-21 Score=129.23 Aligned_cols=155 Identities=14% Similarity=0.144 Sum_probs=108.6
Q ss_pred CCCCeEEeCCCccEEeeCCeEEEEcccCCCCCCcEEEEeCCEEecCCCCCeeEEeec--CCCCeEEEeeeCCc------c
Q psy2441 27 PGFPQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREMLPVDTSRNPRYNLLTS--GAPGTYIKIKPNLF------S 98 (212)
Q Consensus 27 ~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~k~g~~l~~~~~~~~~~~~~--~~~g~~l~i~~~~~------~ 98 (212)
..+|.+...|.. .+.+|++++|.|.+.+ +.+.+.|+|+|..... ....+.+... .|.|.|.|...+.. .
T Consensus 6 ~~~P~i~~~p~~-~v~~G~~v~L~C~~~~-~~~~~~W~k~g~~~~~-~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~s~ 82 (184)
T 2gi7_A 6 LPKPSLQALPSS-LVPLEKPVTLRCQGPP-GVDLYRLEKLSSSRYQ-DQAVLFIPAMKRSLAGRYRCSYQNGSLWSLPSD 82 (184)
T ss_dssp BCCCEEEEESCS-EEETTCCEEEEEECST-TCSEEEEEETTTCCEE-SSSEEEESSCCGGGCEEEEEEEEETTEEBCCCC
T ss_pred CCCCeEEeCCCc-cccCCCcEEEEEeCCC-CCCEEEEEECCccccC-cccEEEECcCChhhCceEEEEEEcCCCccCCCC
Confidence 367888877765 8999999999999987 7789999999865211 1245555543 48999999876621 2
Q ss_pred ceeEEeecCCCCCCCccccCCcceeEecCCcEEEEEeeeeCCCCceEEEeCCEEecCCCCCceEEcCCCCceeEEEcCCC
Q psy2441 99 PLSVYSADKIPPGFPQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREMLPVDTSRNPRYNLLTSGAPGALQITNSI 178 (212)
Q Consensus 99 ~~~v~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~ 178 (212)
.+.+..... ...|.+...+ ...+.+|+.+.|.|.+.+.+ +.+.|++++..+... ... ... ...|.|.+++
T Consensus 83 ~~~l~V~~~--~~~p~i~~~p-~~~v~~G~~v~l~C~~~~~~-~~~~w~k~g~~~~~~--~~~-~~~---~~~L~i~~v~ 152 (184)
T 2gi7_A 83 QLELVATGV--FAKPSLSAQP-GPAVSSGGDVTLQCQTRYGF-DQFALYKEGDPAPYK--NPE-RWY---RASFPIITVT 152 (184)
T ss_dssp CEEEEEESS--SCCCEEEEEC-CCSSCCTTCEEEEEECSSCC-CEEEEEECCCCTTSC--CCC-EEE---EESSSEEEET
T ss_pred CEEEEecCc--CCCCEEEeCC-CceecCCCcEEEEEEcCCCC-cEEEEEECCCcCcce--ecC-CCc---eEEEEEccCC
Confidence 233332211 1225555444 34567899999999987655 699999998776542 111 111 2688999999
Q ss_pred CCCCeeEEEEEEcccc
Q psy2441 179 EEDQGKYECVAENEVG 194 (212)
Q Consensus 179 ~~d~g~y~C~a~n~~g 194 (212)
.+|.|.|.|.|.|..+
T Consensus 153 ~~D~G~Y~C~a~n~~~ 168 (184)
T 2gi7_A 153 AAHSGTYRCYSFSSRD 168 (184)
T ss_dssp TCCSEEEEEEEECTTS
T ss_pred ccCCeEEEEEEEeCCC
Confidence 9999999999999754
No 102
>2ny1_B T-cell surface glycoprotein CD4; HIV, GP120, CD4, viral protein-immune system compl; HET: NAG SUC; 1.99A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 2nxz_B* 2ny0_B* 2nxy_B* 2ny2_B* 2ny3_B* 2ny4_B* 2ny5_C* 2ny6_B* 3jwd_C* 3jwo_C* 1g9m_C* 1g9n_C* 1gc1_C* 1rzj_C* 1rzk_C* 3o2d_A 3cd4_A 3lqa_C* 2b4c_C* 2qad_B* ...
Probab=99.85 E-value=1.7e-20 Score=127.37 Aligned_cols=149 Identities=15% Similarity=0.114 Sum_probs=109.0
Q ss_pred ccEEeeCCeEEEEcccCCCCCCcEEEEeCCEE--ecC----------CC--------------CCeeEEeec--CCCCeE
Q psy2441 38 TKVVEISHTTVLHCSASGNPPPKISWIREMLP--VDT----------SR--------------NPRYNLLTS--GAPGTY 89 (212)
Q Consensus 38 ~~~v~~g~~v~l~C~~~~~p~~~v~W~k~g~~--l~~----------~~--------------~~~~~~~~~--~~~g~~ 89 (212)
.+.+.+|+++.|.|.+.+.|.+.+.|+|++.. +.. .. ...+.+... +|.|.|
T Consensus 4 ~v~~~~G~~v~L~C~~~~~~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~i~~v~~~D~G~Y 83 (184)
T 2ny1_B 4 VVLGKKGDTVELTCTASQKKSIQFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRSLWDQGNFPLIIKNLKIEDSDTY 83 (184)
T ss_dssp EEEEETTSCEEECCBCSSSSCCCEEEEETTCCEEEEEETTEEEECSCTTGGGEECCGGGGGGTBCCEEECSCCGGGCEEE
T ss_pred cEEEeCCCCEEEEEEEcCCCceEEEEEeCCccceEEecCceEecCChhhCCccccccccccCCeEEEEEecCCHHHCEEE
Confidence 45788999999999999888899999999852 210 00 111333332 488888
Q ss_pred EEeeeCCcc--ceeEEeecCCCCCCCccccCCcceeEecCCcEEEEEeeeeCCCCceEEEeCCEEecCCCCCceEEcCCC
Q psy2441 90 IKIKPNLFS--PLSVYSADKIPPGFPQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREMLPVDTSRNPRYNLLTSG 167 (212)
Q Consensus 90 l~i~~~~~~--~~~v~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~ 167 (212)
.|....... .+.|... . .+....+.+|+.+.|.|.+.+.|.+.+.|++++..+.. .+
T Consensus 84 ~C~~~~~~~~~~l~V~~~----------~-~~~~~~v~~g~~~~l~C~~~~~p~~~v~W~~~~~~~~~---------~~- 142 (184)
T 2ny1_B 84 ICEVEDQKEEVQLLVFGL----------T-ANSDTHLLQGQSLTLTLESPPGSSPSVQCRSPRGKNIQ---------GG- 142 (184)
T ss_dssp EEEETTEEEEEEEEEEEE----------E-ESSCSEEETTCCEEEEEECCTTCCCEEEEECTTSCEEE---------ES-
T ss_pred EEEEEcCCCcEEEEEEEe----------c-CCCCceeecCCCEEEEEEcCCCCCCEEEEEeCCCcccc---------Cc-
Confidence 888776433 3333321 1 12234678899999999999999999999998754321 12
Q ss_pred CceeEEEcCCCCCCCeeEEEEEEcccccceecceEEEEeccee
Q psy2441 168 APGALQITNSIEEDQGKYECVAENEVGTEYSPSTMLYVKGTQV 210 (212)
Q Consensus 168 ~~~~l~i~~~~~~d~g~y~C~a~n~~g~~~~~~~~l~v~~~~~ 210 (212)
..|.|.++..+|+|.|.|.|.|..+..... +.|.|.+.+.
T Consensus 143 --~~L~i~~v~~~d~G~Y~C~a~n~~~~~~~~-~~l~V~~~p~ 182 (184)
T 2ny1_B 143 --KTLSVSQLELQDSGTWTCTVLQNQKKVEFK-IDIVVLAFQK 182 (184)
T ss_dssp --SEEEESSCCGGGCEEEEEEEEETTEEEEEE-EEEEEECCCC
T ss_pred --eEEEEecCCcCCCeEEEEEEEECCceEEEE-EEEEEEecCC
Confidence 689999999999999999999998888777 8888877654
No 103
>1jbj_A CD3 epsilon and gamma ectodomain fragment complex; beta-sheet, C2-SET immunoglobulin superfamily, H-bonded G strand PAIR, single-chain; NMR {Mus musculus} SCOP: b.1.1.4 b.1.1.4 PDB: 1xmw_A
Probab=99.85 E-value=6.6e-20 Score=124.81 Aligned_cols=144 Identities=15% Similarity=0.257 Sum_probs=100.2
Q ss_pred cEEeeCCeEEEEcccCCCCCCcEEEEeCCEEecCCCCCeeEEee-c--CCCCeEEEeeeCCccceeEEeec----CCCCC
Q psy2441 39 KVVEISHTTVLHCSASGNPPPKISWIREMLPVDTSRNPRYNLLT-S--GAPGTYIKIKPNLFSPLSVYSAD----KIPPG 111 (212)
Q Consensus 39 ~~v~~g~~v~l~C~~~~~p~~~v~W~k~g~~l~~~~~~~~~~~~-~--~~~g~~l~i~~~~~~~~~v~~~~----~~~~~ 111 (212)
..+.+|+.+.|.|.+.+ ++ .|.|+|+|.++....+..+.+.. . +|.|.|.|...+........... ..++.
T Consensus 9 ~v~~~G~~v~L~C~~~~-~~-~i~W~k~g~~l~~~~~~~L~I~~~~~~~D~G~Y~C~a~n~~g~~~~~~~~~v~~~~~~~ 86 (186)
T 1jbj_A 9 KVSISGTSVELTCPLDS-DE-NLKWEKNGQELPQKHDKHLVLQDFSEVEDSGYYVCYTPASNKNTYLYLKARVGSADDAK 86 (186)
T ss_dssp EEEEETTEEEEECSSCC-CT-TCEEEETTEEECSCCCSEEEEESCCTTTSCEEEEEECSSCCCCCCEEECCCCCSCCCCC
T ss_pred EEEeCCcEEEEEEeCCC-CC-ceEEEECCEECCCCCCCEEEECCCCccccCEEEEEEEEeCCCcEEEEEEEEEecccccc
Confidence 44578999999999987 43 49999999999875446677766 3 59999999887733222211111 11110
Q ss_pred -------------CCccccC----Ccc---eeEecCCcEEEEEeeeeCCCCceEEEeCCEEecCCCCCceEEcCCCCcee
Q psy2441 112 -------------FPQITEA----PST---KVVEISHTTVLHCSASGNPPPKISWIREMLPVDTSRNPRYNLLTSGAPGA 171 (212)
Q Consensus 112 -------------~p~~~~~----~~~---~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (212)
+|.+... ... ..+.+|+.+.|.|.+ |.|.+.|++++..+..... . ...
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~l~C~~---p~p~i~W~k~g~~i~~~~~------~---~~~ 154 (186)
T 1jbj_A 87 KDAAKKDDAKKDDAKKDGSQTNKAKNLVQVDGSRGDGSVLLTCGL---TDKTIKWLKDGSIISPLNA------T---KNT 154 (186)
T ss_dssp CCCCCCCCCSCCSSSTTCCSCCCCSSCCEECCCSSSCEEEEECSS---SCSCEEEEETTEECCCSSC------C---SSC
T ss_pred cccccccccccCCccccccccccccccccceecCCCCeEEEEeeC---CCCeEEEEECCEECcccCC------C---cce
Confidence 0000000 001 123489999999999 7889999999998764311 1 278
Q ss_pred EEEcCCCCCCCeeEEEEEEcccccc
Q psy2441 172 LQITNSIEEDQGKYECVAENEVGTE 196 (212)
Q Consensus 172 l~i~~~~~~d~g~y~C~a~n~~g~~ 196 (212)
|.|.++..+|+|.|+|.|.|..|+.
T Consensus 155 L~i~~v~~~D~G~Y~C~a~N~~g~~ 179 (186)
T 1jbj_A 155 WNLGNNAKDPRGTYQCQGAKETSNP 179 (186)
T ss_dssp CEEEETTSCCEEEEEEEESSCEEEE
T ss_pred EEECCCCcCcCEEEEEEEEcCcCCc
Confidence 9999999999999999999998865
No 104
>2x1w_L Vascular endothelial growth factor receptor 2; hormone-signaling protein complex, angiogenesis, glycoprotein, HOST-virus interaction, membrane; HET: NAG BMA; 2.70A {Homo sapiens} PDB: 2x1x_R*
Probab=99.85 E-value=2e-20 Score=130.08 Aligned_cols=170 Identities=15% Similarity=0.146 Sum_probs=110.5
Q ss_pred CCCccEEeeC--CeEEEEcccCCCCCCcEEEEeC---CEEecCCC------CCeeEEeec--CCCCeEEEeeeCC-----
Q psy2441 35 APSTKVVEIS--HTTVLHCSASGNPPPKISWIRE---MLPVDTSR------NPRYNLLTS--GAPGTYIKIKPNL----- 96 (212)
Q Consensus 35 ~~~~~~v~~g--~~v~l~C~~~~~p~~~v~W~k~---g~~l~~~~------~~~~~~~~~--~~~g~~l~i~~~~----- 96 (212)
.|..+.+.+| +++.|.|.+.+ |.+.++|+|+ |..+.... ...+.+... .|.|.|.|...+.
T Consensus 13 ~p~~v~v~eG~~~~v~L~C~~~~-p~~~v~w~~~~~~g~~~~~~~~~~~~~~~~l~I~~v~~~D~G~Y~C~a~n~~~~~~ 91 (213)
T 2x1w_L 13 QHGVVYITENKNKTVVIPCLGSI-SNLNVSLCARYPEKRFVPDGNRISWDSKKGFTIPSYMISYAGMVFCEAKINDESYQ 91 (213)
T ss_dssp -CEEEEECCSTTCEEEECCCBSS-TTCCEEEEEETTTEEECCCSSSCEEETTTEEEEEGGGTTTCSEEEEEEC----CEE
T ss_pred CceEEEEecCCCccEEEeeccCC-CCcEEEEEhhcCCCccccCCCcccccCCccEEEccCChhcCceEEEEEEECCeeEE
Confidence 3467888999 99999999976 7789999884 66654431 123444333 5899999988651
Q ss_pred ccceeEEeecCCCCCCCccccCCcc-eeEecCCcEEEEEeeeeCCC--CceEEEeCCEEecCCCC--CceEEcC----CC
Q psy2441 97 FSPLSVYSADKIPPGFPQITEAPST-KVVEISHTTVLHCSASGNPP--PKISWIREMLPVDTSRN--PRYNLLT----SG 167 (212)
Q Consensus 97 ~~~~~v~~~~~~~~~~p~~~~~~~~-~~~~~g~~~~l~C~~~~~p~--~~i~W~~~~~~~~~~~~--~~~~~~~----~~ 167 (212)
...+.+.... ..+|.+...+.. ..+.+|+.+.|.|.+.+.|. +.+.|++++..+..... .+..... ..
T Consensus 92 s~~~~l~v~~---~~~p~~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~~~i~W~~~g~~~~~~~~~~~~~~~~~~~~~~~ 168 (213)
T 2x1w_L 92 SIMYIVVVVG---YRIYDVVLSPSHGIELSVGEKLVLNCTARTELNVGIDFNWEYPSSKHQHKKLVNRDLKTQSGSEMKK 168 (213)
T ss_dssp CCCEEEEECB---CCEEEEEEESCSCEEEETTCCEEEEEEEEECTTBCCEEEEECSCSSCCSEEEEEEEECCCSSCSCEE
T ss_pred EEEEEEEEeC---CcccceEEcCCCCeEEcCCCCEEEEEEEECCCCCceEEEEEecCCccceEEEeccccccccCcccee
Confidence 1112222211 112444443333 47899999999999998654 47999998875432100 0000000 01
Q ss_pred CceeEEEcCCCCCCCeeEEEEEEcccccceecceEEEEecce
Q psy2441 168 APGALQITNSIEEDQGKYECVAENEVGTEYSPSTMLYVKGTQ 209 (212)
Q Consensus 168 ~~~~l~i~~~~~~d~g~y~C~a~n~~g~~~~~~~~l~v~~~~ 209 (212)
...+|.|.+++.+|+|.|+|.|.|..|..... +.|.|.+++
T Consensus 169 ~~~~L~I~~v~~~D~G~Y~C~a~N~~g~~~~~-~~l~V~~~p 209 (213)
T 2x1w_L 169 FLSTLTIDGVTRSDQGLYTCAASSGLMTKKNS-TFVRVHEDP 209 (213)
T ss_dssp EEEEEEESSCCGGGCEEEEEEEECSSCEEEEE-EEEEEEC--
T ss_pred eeEEEEECCCCcccCEEEEEEEecCCCcEEEE-EEEEEeccc
Confidence 12579999999999999999999999988766 777776643
No 105
>3jz7_A MCAR, CAR, coxsackievirus and adenovirus receptor homolog; cell adhesion molecule, immunoglobuline superfamily, alternative splicing, cell adhesion; 2.19A {Mus musculus} PDB: 3mj7_B* 2npl_X
Probab=99.85 E-value=4.6e-21 Score=132.91 Aligned_cols=161 Identities=22% Similarity=0.289 Sum_probs=106.7
Q ss_pred eCCCccEEeeCCeEEEEcccCCCC----CCcEEEEe----------------CCEEecC---CCCCeeEE----------
Q psy2441 34 EAPSTKVVEISHTTVLHCSASGNP----PPKISWIR----------------EMLPVDT---SRNPRYNL---------- 80 (212)
Q Consensus 34 ~~~~~~~v~~g~~v~l~C~~~~~p----~~~v~W~k----------------~g~~l~~---~~~~~~~~---------- 80 (212)
..+..+.+.+|+++.|.|.+.+.+ .+.+.|+| ++..+.. ....|+.+
T Consensus 5 ~~~~~v~v~~G~~v~L~C~~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~ 84 (214)
T 3jz7_A 5 TPEQRIEKAKGETAYLPCKFTLSPEDQGPLDIEWLISPSDNQIVDQVIILYSGDKIYDNYYPDLKGRVHFTSNDVKSGDA 84 (214)
T ss_dssp -CEEEEEEETTSCEEECCBCCCCTTCCSCCEEEEEEEESSSSCCSEEEEEEETTEEECCCCGGGTTTEEESCSCGGGTBC
T ss_pred cCCceEEEecCCCEEEEEEEecCCCCCCcEEEEEEecCCCCCCCceEEEEEeCCeEccccCCccccceEEeccCccCCcc
Confidence 344567889999999999998876 46899998 4444431 00133333
Q ss_pred ----eec--CCCCeEEEeeeCC------ccceeEEeecCCCCCCCccccCCcceeEecCCcEEEEEee-eeCCCCceEEE
Q psy2441 81 ----LTS--GAPGTYIKIKPNL------FSPLSVYSADKIPPGFPQITEAPSTKVVEISHTTVLHCSA-SGNPPPKISWI 147 (212)
Q Consensus 81 ----~~~--~~~g~~l~i~~~~------~~~~~v~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~-~~~p~~~i~W~ 147 (212)
... +|.|.|.|..... ...+.|.. + |.+...+....+..|+.+.|.|.+ .+.|.+.+.|+
T Consensus 85 ~L~i~~v~~~D~G~Y~C~~~~~~~~~~~~~~l~V~~----~---p~~~~~~~~~~~~~g~~v~l~C~~~~g~p~~~v~W~ 157 (214)
T 3jz7_A 85 SINVTNLQLSDIGTYQCKVKKAPGVANKKFLLTVLV----K---PSGTRCFVDGSEEIGNDFKLKCEPKEGSLPLQFEWQ 157 (214)
T ss_dssp CEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEC----C---CBSCEEEEESCCBTTCCEEEEEECSBCCSSCEEEEE
T ss_pred cEEEccCChhhCeEEEEEEEeCCCccccEEEEEEEc----C---CCCceeeeecceecCCcEEEEecCCCCCCCCEEEEE
Confidence 222 4888898877652 22333332 2 333333333346789999999999 89999999999
Q ss_pred eCCEEecCCCCCceEEcCCCCceeEEEcCCCCCCCeeEEEEEEcccccceecceEEEEe
Q psy2441 148 REMLPVDTSRNPRYNLLTSGAPGALQITNSIEEDQGKYECVAENEVGTEYSPSTMLYVK 206 (212)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~n~~g~~~~~~~~l~v~ 206 (212)
+++...... ........+ ..|.|.++..+|.|.|+|.|.|..|..... +.|.|.
T Consensus 158 ~~~~~~~~~-~~~~~~~~~---~~L~i~~~~~~d~G~Y~C~a~N~~g~~~~~-~~l~V~ 211 (214)
T 3jz7_A 158 KLSDSQTMP-TPWLAEMTS---PVISVKNASSEYSGTYSCTVQNRVGSDQCM-LRLDVV 211 (214)
T ss_dssp ECSTTCCCC-GGGGGGTTS---SEEEECSCCGGGCEEEEEEEECSSCEEEEE-EEECCB
T ss_pred ECCCCCccC-ccceeccCC---CEEEEecCCHHHCEEEEEEEEcCCCcEEEE-EEEEEe
Confidence 954322221 011111122 699999999999999999999999988665 666655
No 106
>4f80_A Butyrophilin subfamily 3 member A1; B7 superfamily, CD277, immune system; 1.94A {Homo sapiens} PDB: 4f9l_A* 4f9p_A 4f8t_A 4f8q_A
Probab=99.85 E-value=2e-20 Score=131.14 Aligned_cols=170 Identities=10% Similarity=0.082 Sum_probs=101.1
Q ss_pred CCccEEeeCCeEEEEcccCCCCCC---cEEEEeCCEE-----------ecCCC----CC--------------eeEEeec
Q psy2441 36 PSTKVVEISHTTVLHCSASGNPPP---KISWIREMLP-----------VDTSR----NP--------------RYNLLTS 83 (212)
Q Consensus 36 ~~~~~v~~g~~v~l~C~~~~~p~~---~v~W~k~g~~-----------l~~~~----~~--------------~~~~~~~ 83 (212)
+..+.+.+|++++|.|.+.+.+.+ .|.|+|++.. +.... .. .+.|...
T Consensus 11 ~~pV~v~~G~~v~L~C~v~~~~~~~~~~V~W~k~~~~~~v~~~~~g~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v 90 (226)
T 4f80_A 11 SGPILAMVGEDADLPCHLFPTMSAETMELKWVSSSLRQVVNVYADGKEVEDRQSAPYRGRTSILRDGITAGKAALRIHNV 90 (226)
T ss_dssp SSCEEEETTSCEEEEEEEESCCCCTTSEEEEEETTTCCEEEEEETTEECGGGSCTTTTTTEEEECTTGGGTEEEEEESSC
T ss_pred CCCEEEEcCCcEEEEEEEECCCCCCceEEEEEECCCCceEEEEeCCeEcccccCccccceEEEecccccCCeEEEEEeeC
Confidence 345788999999999999765543 6999997531 11100 01 1223222
Q ss_pred --CCCCeEEEeeeCCccceeEEeecCCCCCCCccccCCcceeEecCCcEEEEEeeee-CCCCceEEEeCCEEecCCCCCc
Q psy2441 84 --GAPGTYIKIKPNLFSPLSVYSADKIPPGFPQITEAPSTKVVEISHTTVLHCSASG-NPPPKISWIREMLPVDTSRNPR 160 (212)
Q Consensus 84 --~~~g~~l~i~~~~~~~~~v~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~-~p~~~i~W~~~~~~~~~~~~~~ 160 (212)
.|.|.|.|...+.............+ +.+........+.+|+.+.|.|.+.+ .|.|.|.|++++..........
T Consensus 91 ~~~D~G~Y~C~a~n~~~~~~~~v~~~~~---~~~~~~~~~~~~~~g~~v~l~c~~~g~~P~p~i~W~k~~~~~~~~~~~~ 167 (226)
T 4f80_A 91 TASDSGKYLCYFQDGDFYEKALVELKVA---ALGSDLHVDVKGYKDGGIHLECRSTGWYPQPQIQWSNNKGENIPTVEAP 167 (226)
T ss_dssp CGGGCEEEEEEEEETTEEEEEEEEEEEE---BCCCCCEEEEEEEETTEEEEEEEEEEEBSCCEEEEECTTSCBCCCEECC
T ss_pred chHHCeeEEEEEECCCcEEEEEEEEeec---cceecccceeeeccCCceeeEEEeccCCCCCEEEEEECCceEcCCCceE
Confidence 38888888876633222211111111 22222333456778999999999988 5999999999654433221122
Q ss_pred eEEcCCCCceeEEEcCCCCCCCeeEEEEEEcccccceecceEEEEecce
Q psy2441 161 YNLLTSGAPGALQITNSIEEDQGKYECVAENEVGTEYSPSTMLYVKGTQ 209 (212)
Q Consensus 161 ~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~n~~g~~~~~~~~l~v~~~~ 209 (212)
+....++....+.+.++..+|.|.|+|.|.|..|..... +.|.|.++.
T Consensus 168 ~~~~~~g~~~v~s~l~v~~~d~G~YtC~a~N~~g~~~~~-~~v~v~ep~ 215 (226)
T 4f80_A 168 VVADGVGLYAVAASVIMRGSSGEGVSCTIRSSLLGLEKT-ASISIADPF 215 (226)
T ss_dssp CEECTTSCEEEEEEEEECC----CEEEEEEETTTTEEEE-EEECCCTTT
T ss_pred EEECCCCcEEEEEEEEechhcCcEEEEEEEeCCCCeEEE-EEEEECCCC
Confidence 222222222334455677899999999999999998877 888777653
No 107
>3knb_A Titin; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=99.84 E-value=1.6e-20 Score=114.77 Aligned_cols=95 Identities=19% Similarity=0.415 Sum_probs=82.0
Q ss_pred CCccccCCcceeEecCCcEEEEEeeeeCCCCceEEEeCCEEecCCCCCceEEcCCCCceeEEEcCCCCCCCeeEEEEEEc
Q psy2441 112 FPQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREMLPVDTSRNPRYNLLTSGAPGALQITNSIEEDQGKYECVAEN 191 (212)
Q Consensus 112 ~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~n 191 (212)
+|.|...+....+.+|+.+.|.|.+.|.|.|.+.|++++..+......++.....+...+|.|.++..+|+|.|.|.|.|
T Consensus 5 PP~i~~~p~~~~v~~G~~~~l~C~~~g~P~p~v~W~k~g~~i~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~N 84 (100)
T 3knb_A 5 PPKIEALPSDISIDEGKVLTVACAFTGEPTPEVTWSCGGRKIHSQEQGRFHIENTDDLTTLIIMDVQKQDGGLYTLSLGN 84 (100)
T ss_dssp EEEECCCCSEEEEETTSEEEEEEEEEEESCCEEEEEETTEECCTTGGGTEEEEECSSEEEEEESSCCGGGCEEEEEEEEE
T ss_pred CCEEEeCCCcEEEeCCCeEEEEEEEEEecCCEEEEEECceEeeeeccceeeeecccceEEEEEcCCCccCCEEEEEEEEE
Confidence 47777778888899999999999999999999999999999877544566666655567899999999999999999999
Q ss_pred ccccceecceEEEEec
Q psy2441 192 EVGTEYSPSTMLYVKG 207 (212)
Q Consensus 192 ~~g~~~~~~~~l~v~~ 207 (212)
..|..... +.|.|+.
T Consensus 85 ~~G~~~~~-~~l~V~~ 99 (100)
T 3knb_A 85 EFGSDSAT-VNIHIRS 99 (100)
T ss_dssp TTEEEEEE-EEEEEEC
T ss_pred CCCEEEEE-EEEEEEE
Confidence 99998777 8888764
No 108
>3bp6_B Programmed cell death 1 ligand 2; PD-1, PD-L2, complex, costimulation, glycoprotein, immunoglo domain, membrane, transmembrane, receptor; 1.60A {Mus musculus} PDB: 3bp5_B 3rnq_B 3bov_A 3rnk_B
Probab=99.84 E-value=1.7e-20 Score=129.24 Aligned_cols=166 Identities=14% Similarity=0.128 Sum_probs=104.6
Q ss_pred EeCCCccEEeeCCeEEEEcccCCCCC-----CcEEEEe-CCEEecCCC------------CCeeEEeec--CCCCeEEEe
Q psy2441 33 TEAPSTKVVEISHTTVLHCSASGNPP-----PKISWIR-EMLPVDTSR------------NPRYNLLTS--GAPGTYIKI 92 (212)
Q Consensus 33 ~~~~~~~~v~~g~~v~l~C~~~~~p~-----~~v~W~k-~g~~l~~~~------------~~~~~~~~~--~~~g~~l~i 92 (212)
...+..+.+.+|+++.|.|.+.+.|. +.+.|+| ++....... ...+.+... .|.|.|.|.
T Consensus 6 ~~p~~~v~v~~G~~v~L~C~~~~~p~~~~~~~~v~W~k~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 85 (202)
T 3bp6_B 6 TAPKEVYTVDVGSSVSLECDFDRRECTELEGIRASLQKVENDTSLQSERATLLEEQLPLGKALFHIPSVQVRDSGQYRCL 85 (202)
T ss_dssp ECSCSEEEEETTSCEEEEEEECTTC---CTTEEEEEEECC--CCCBCSSCEECGGGGGGTEEEEEECSCCGGGCEEEEEE
T ss_pred ecCCcCEEEeCCCcEEEEEEecCCCCCCccceEEEEEcCCCcccccCCceEEeeccccCCeeEEEECCCCHHHCcEEEEE
Confidence 34455678999999999999988876 7899999 433222210 012223222 488899987
Q ss_pred eeCCc------cceeEEeecCCCCCCCccccCCcceeEecCCcEEEEEeeeeCCCCceEEEeCCEEecCCCCCceEEcCC
Q psy2441 93 KPNLF------SPLSVYSADKIPPGFPQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREMLPVDTSRNPRYNLLTS 166 (212)
Q Consensus 93 ~~~~~------~~~~v~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~ 166 (212)
..... ..+.|.. ++..|.+.. ..+.+|+.+.|.|.+.|.|.|.+.|++++..+.. ......+
T Consensus 86 ~~~~~~~~~~~~~l~V~~----~~~~p~~~~----~~~~~g~~v~l~C~~~g~P~p~v~W~~~~~~~~~----~~~~~~~ 153 (202)
T 3bp6_B 86 VICGAAWDYKYLTVKVKA----SYMRIDTRI----LEVPGTGEVQLTCQARGYPLAEVSWQNVSVPANT----SHIRTPE 153 (202)
T ss_dssp EEETTEEEEEEEEEEEEB----CCCCEEEEE----EECTTTCCEEEEEEEEEBSCCEEEETTCCSCCEE----EEEECTT
T ss_pred EEeCCCcceEEEEEEecC----CCCcccEEE----EecCCCCeEEEEEEccccCCceEEEEeCCCCccC----ceeeCCC
Confidence 76622 2222221 111122211 2346799999999999999999999997764432 1112222
Q ss_pred CCceeEEEcCCCCCCCeeEEEEEEcccccceecceEEEEecceec
Q psy2441 167 GAPGALQITNSIEEDQGKYECVAENEVGTEYSPSTMLYVKGTQVD 211 (212)
Q Consensus 167 ~~~~~l~i~~~~~~d~g~y~C~a~n~~g~~~~~~~~l~v~~~~~p 211 (212)
+....+.+.++..+|.|.|+|.|.|..|..... +.|.|.+...|
T Consensus 154 ~~~~~~~i~~v~~~d~G~Y~C~a~N~~g~~~~~-~~l~v~~~~~p 197 (202)
T 3bp6_B 154 GLYQVTSVLRLKPQPSRNFSCMFWNAHMKELTS-AIIDPLSRMEP 197 (202)
T ss_dssp SCEEEEEEEEECCCTTCCEEEEEEETTTTEEEE-EEECC------
T ss_pred CCEEEEEEEEEEcCCCCEEEEEEEcCCcccccE-EEEEecCcCCC
Confidence 223566777888999999999999999998877 88877766544
No 109
>3o4o_C Interleukin-1 receptor type 2; cytokine-receptor complex, beta-trefoil, IG-like fold, immun; HET: NAG; 3.30A {Homo sapiens}
Probab=99.84 E-value=3.5e-20 Score=137.36 Aligned_cols=170 Identities=19% Similarity=0.276 Sum_probs=121.1
Q ss_pred CCCCeEEeCCCccEEeeCCeEEEEcccC-------CCCCCcEEEEeCCEEe--cCCCCCe-------eEEeec--CCCCe
Q psy2441 27 PGFPQITEAPSTKVVEISHTTVLHCSAS-------GNPPPKISWIREMLPV--DTSRNPR-------YNLLTS--GAPGT 88 (212)
Q Consensus 27 ~~~p~~~~~~~~~~v~~g~~v~l~C~~~-------~~p~~~v~W~k~g~~l--~~~~~~~-------~~~~~~--~~~g~ 88 (212)
...|.+...+....+.+|+.+.|.|.+. +.|.+.|.|+|+|..+ ......+ +.+... +|.|.
T Consensus 16 ~~~p~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~ 95 (339)
T 3o4o_C 16 RSCRFRGRHYKREFRLEGEPVALRCPQVPYWLWASVSPRINLTWHKNDSARTVPGEEETRMWAQDGALWLLPALQEDSGT 95 (339)
T ss_dssp --CEEEEECSCCEEEETTBCCEEECTTSCSSCCSTTSSCCBCCCEESSCCSCCSCCSSSCEEEETTEEEESSBCTTCCEE
T ss_pred hhhHhhCcCceEEEEECCccEEEEeccccccccccCCCCceEEEEECCCCcccCccccccEEeeCCeEEECCCCcccCEE
Confidence 5678888999999999999999999998 8889999999999773 3221122 333222 48889
Q ss_pred EEEeeeCCc------cceeEEeecCCCCCCCcc--ccCCcceeEecCCcEEEEEe-----eeeCCCCceEEEeCCEEecC
Q psy2441 89 YIKIKPNLF------SPLSVYSADKIPPGFPQI--TEAPSTKVVEISHTTVLHCS-----ASGNPPPKISWIREMLPVDT 155 (212)
Q Consensus 89 ~l~i~~~~~------~~~~v~~~~~~~~~~p~~--~~~~~~~~~~~g~~~~l~C~-----~~~~p~~~i~W~~~~~~~~~ 155 (212)
|.|...... ..+.|... +.. ........+.+|+.+.|.|. +.+.|.+.+.|++++..+..
T Consensus 96 Y~C~~~n~~g~~~~~~~l~V~~~-------~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~g~p~~~v~W~k~g~~~~~ 168 (339)
T 3o4o_C 96 YVCTTRNASYCDKMSIELRVFEN-------TDAFLPFISYPQILTLSTSGVLVCPDLSEFTRDKTDVKIQWYKDSLLLDK 168 (339)
T ss_dssp EECCEEETTEEEEEEEEEEEECS-------CGGGHHHHCEEEEEETTSCEEEECCSCTTTCCSSSCCCBCCEESSCBCCT
T ss_pred EEEEEECCcceEEEEEEEEEEcC-------CCccccccccceEEECCCCEEEEecCCcccccCCCCceEEEecCCeeCCC
Confidence 988876622 22222221 111 11122246788999999999 78899999999999988765
Q ss_pred CCCCceEEcCCCCceeEEEcCCCCCCCeeEEEEEEccccc----ceecceEEEEec
Q psy2441 156 SRNPRYNLLTSGAPGALQITNSIEEDQGKYECVAENEVGT----EYSPSTMLYVKG 207 (212)
Q Consensus 156 ~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~n~~g~----~~~~~~~l~v~~ 207 (212)
. ..++....+. ..|.|.++..+|.|.|+|.|.|..|. .... +.|.|..
T Consensus 169 ~-~~~~~~~~~~--~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~~~-~~l~V~~ 220 (339)
T 3o4o_C 169 D-NEKFLSVRGT--THLLVHDVALEDAGYYRCVLTFAHEGQQYNITRS-IELRIKK 220 (339)
T ss_dssp T-CSSEEECTTS--SEEEESSCCGGGCEEEEEEEECCBTTBCCEEEEE-EEEEEEC
T ss_pred C-CceeEEcCCc--ceEEEcccCHhhCeEEEEEEEECCCCeEEEEEEE-EEEEEEc
Confidence 4 3455555443 58999999999999999999998874 3333 6666654
No 110
>3knb_B Obscurin-like protein 1; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 2wp3_O* 2wwm_C 2wwk_O
Probab=99.83 E-value=3.4e-20 Score=114.67 Aligned_cols=94 Identities=27% Similarity=0.458 Sum_probs=81.2
Q ss_pred CCccccCCcceeEecCCcEEEEEeeeeCCCCceEEEeCCEEecCCCCCceEEcCCCCceeEEEcCCCCCCCeeEEEEEEc
Q psy2441 112 FPQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREMLPVDTSRNPRYNLLTSGAPGALQITNSIEEDQGKYECVAEN 191 (212)
Q Consensus 112 ~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~n 191 (212)
+|.|...+....+.+|+.+.|.|.+.|.|.|.+.|++++..+... .++.+..++....|.|.++..+|+|.|.|.|.|
T Consensus 13 pP~f~~~p~~~~v~~G~~~~l~C~~~G~P~p~v~W~k~g~~l~~~--~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N 90 (107)
T 3knb_B 13 PPCFLRFPRPVRVVSGAEAELKCVVLGEPPPVVVWEKGGQQLAAS--ERLSFPADGAEHGLLLTAALPTDAGVYVCRARN 90 (107)
T ss_dssp EEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCC--SSEECCEETTEEEEEESSCCGGGCEEEEEEEEE
T ss_pred CCEEEeCCCcEEEeCCCcEEEEEEEEEecCCEEEEEECcccccce--eeEEEeecCceEEEEEecCChhhCEEEEEEEEE
Confidence 478888888889999999999999999999999999999998775 556555555557899999999999999999999
Q ss_pred ccccceecceEEEEecc
Q psy2441 192 EVGTEYSPSTMLYVKGT 208 (212)
Q Consensus 192 ~~g~~~~~~~~l~v~~~ 208 (212)
..|..... +.|.|.++
T Consensus 91 ~~G~~~~~-~~l~V~~p 106 (107)
T 3knb_B 91 AAGEAYAA-AAVTVLEP 106 (107)
T ss_dssp TTEEEEEE-EEEEEEC-
T ss_pred CCCEEEEE-EEEEEEcC
Confidence 99998877 88887764
No 111
>1qgc_4 Protein (immunoglobulin); virus-antibody complex, icosahedral virus, virus-immune SYST complex; 30.00A {Mus musculus} SCOP: i.6.1.1
Probab=99.83 E-value=1.4e-20 Score=144.02 Aligned_cols=190 Identities=14% Similarity=0.193 Sum_probs=119.0
Q ss_pred ceeeEEEeeccCCCcceecccccCCCCCeEEeCCCccEEeeCCeEEEEcccCCCC--CCcEEEEeC--CEEecC------
Q psy2441 3 IGTYIKIKPNLFSPLSVYSADKIPPGFPQITEAPSTKVVEISHTTVLHCSASGNP--PPKISWIRE--MLPVDT------ 72 (212)
Q Consensus 3 ~g~Y~C~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p--~~~v~W~k~--g~~l~~------ 72 (212)
+|.|+|.+.|..+........ ....++.....+....+.+|+.+.|.|.+.+.| .+.+.|+|+ |..+..
T Consensus 193 ~G~Y~C~a~n~~~~~~~~~~~-~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~g~~~~~~~~~~~ 271 (438)
T 1qgc_4 193 HNSYTCEATHKTSTSPIVKSF-NRNECEVMLVESGGGLVKPGGSLKLSCTASGFIFNRCAMSWVRQTPEKRLEWVATISS 271 (438)
T ss_dssp CCEEEEEEEETTCSSCEEEEE-ETTC-CCEEEEECCEEECTTCCEEEEEEEESSCGGGSCEEEEEEETTTEEEEEEEECT
T ss_pred CCeEEEEEEecccCCceeccc-ccccceeEEecCCceEEecCCcEEEEEEEcccccCCcEEEEEECCCCCCcEEEEEEee
Confidence 589999999987764322111 111222233445677899999999999999888 678999996 433210
Q ss_pred ---------CCCCeeEEe-------------ec--CCCCeEEEeeeCC-----------ccceeEEeecCCCCCCCcccc
Q psy2441 73 ---------SRNPRYNLL-------------TS--GAPGTYIKIKPNL-----------FSPLSVYSADKIPPGFPQITE 117 (212)
Q Consensus 73 ---------~~~~~~~~~-------------~~--~~~g~~l~i~~~~-----------~~~~~v~~~~~~~~~~p~~~~ 117 (212)
....|+.+. .. +|.|.|.|...+. ...+.|.. .+..+|.+..
T Consensus 272 ~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~~~~~l~V~~---~~~~~P~v~~ 348 (438)
T 1qgc_4 272 GGTYTYYPDSVKGRFTISRDNAKNTLYLQMSSLRSADTAMYYCVRREDGGDEGFAYWGQGTVVTVSA---AKTTPPSVYP 348 (438)
T ss_dssp TSCCEECCGGGTTTEEEEEETTTTEEEEEECSCCGGGCCEEEEEECCSSSCCCCCSBCCCEEEEECS---SCCBCCEEEE
T ss_pred cCCceecCcccCCcEEEEeecCCCeEEEEECCCChhhCEEEEEEEEccCCCccceeeCCCEEEEEec---CCCCCCeEEE
Confidence 001233222 21 3888999988751 11233321 1112244433
Q ss_pred CCcceeEecCCcEEEEEeeeeC-CCC-ceEEEeCCEEecCCCCCceEEcCCCC---ceeEEEcCCCCCCCeeEEEEEEcc
Q psy2441 118 APSTKVVEISHTTVLHCSASGN-PPP-KISWIREMLPVDTSRNPRYNLLTSGA---PGALQITNSIEEDQGKYECVAENE 192 (212)
Q Consensus 118 ~~~~~~~~~g~~~~l~C~~~~~-p~~-~i~W~~~~~~~~~~~~~~~~~~~~~~---~~~l~i~~~~~~d~g~y~C~a~n~ 192 (212)
.+....+.+|+.+.|.|.+.+. |.+ .+.|++++..+.......+. .++. .+.|.|.++..+| |.|+|.|.|.
T Consensus 349 ~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~~~g~~~~~~~~~~~~--~~g~~~~~s~L~i~~~~~~d-g~Y~C~a~n~ 425 (438)
T 1qgc_4 349 LAPGSAAAAASMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVL--QSDLYTLSSSVTVPSSTWPS-ETVTCNVAHP 425 (438)
T ss_dssp ECCCGGGCCSSEEEEEEEEESCBSSCCEEEEGGGTCCSSEEECCCEE--ETTEEEEEEEEEEEEEHHHH-SCCEEEEEEG
T ss_pred cCcccccccCCcEEEEEEeccccCCCcEEEEecCCCCCceeecCccc--cCCcEEEEEEEEEehhhcCC-ceEEEEEEeC
Confidence 3323335679999999999997 877 99999998776432111111 1111 2468999888889 9999999999
Q ss_pred cccceec
Q psy2441 193 VGTEYSP 199 (212)
Q Consensus 193 ~g~~~~~ 199 (212)
.|.....
T Consensus 426 ~g~~~~~ 432 (438)
T 1qgc_4 426 ASSTKVD 432 (438)
T ss_dssp GGTEEEE
T ss_pred CCCccee
Confidence 9876544
No 112
>1p6f_A NKP46, natural cytotoxicity triggering receptor 1; natural cytotoxicity receptor, NK cell receptor, immunoglobulin fold, immune system; 2.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.83 E-value=6.8e-19 Score=124.52 Aligned_cols=170 Identities=13% Similarity=0.119 Sum_probs=114.7
Q ss_pred CCCCeEEeCCCccEEeeCCeEEEEcccCCCCCCcEEEEeCCEEecC--------CCCCeeEEeec--CCCCeEEEeeeCC
Q psy2441 27 PGFPQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREMLPVDT--------SRNPRYNLLTS--GAPGTYIKIKPNL 96 (212)
Q Consensus 27 ~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~k~g~~l~~--------~~~~~~~~~~~--~~~g~~l~i~~~~ 96 (212)
..+|.+...|.. .+.+|+.|+|.|.+.+ +...+.|||+|..+.. .....+.+... .|.|.|.|.....
T Consensus 5 ~~kP~i~~~P~~-~v~~G~~VtL~C~~~~-~~~~~~w~k~g~~~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~ 82 (242)
T 1p6f_A 5 LPKPFIWAEPHF-MVPKEKQVTICCQGNY-GAVEYQLHFEGSLFAVDRPKPPERINKVKFYIPDMNSRMAGQYSCIYRVG 82 (242)
T ss_dssp CCCCEEEEESCS-EEETTCCEEEEEECCT-TCCEEEEEETTEEEEEECCSSCTTCCEEEEEECSCCGGGCEEEEEEEEET
T ss_pred CCCCEEEeeCCC-ccCCCCcEEEEEeeCC-CCcEEEEEECCCccccccccccCCcceeEEEecCCCcccCeEEEEEEecC
Confidence 367888877776 8999999999999975 4567999999977631 11233444433 4899999987541
Q ss_pred ------ccceeEEeecCCCCCCCccccCCcceeEecCCcEEEEEeeeeCCCCceEEEeCCEEecCCCCCceEEcCCCCce
Q psy2441 97 ------FSPLSVYSADKIPPGFPQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREMLPVDTSRNPRYNLLTSGAPG 170 (212)
Q Consensus 97 ------~~~~~v~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~ 170 (212)
...+.+...... ..|.+...+. ..+.+|+.+.|.|.+.+. .+.+.|++++..+... .... ....
T Consensus 83 ~~~s~~S~~~~L~V~~~~--~~P~i~~~p~-~~v~~G~~vtL~C~~~~~-~~~~~w~k~g~~~~~~----~~~~--~~~~ 152 (242)
T 1p6f_A 83 ELWSEPSNLLDLVVTEMY--DTPTLSVHPG-PEVISGEKVTFYCRLDTA-TSMFLLLKEGRSSHVQ----RGYG--KVQA 152 (242)
T ss_dssp TEECCCCCCEEEEEECCS--CCCEEEEESC-SEEETTCEEEEEEECTTS-CSEEEEEECSSSCEEE----EEEC--SSEE
T ss_pred CccccCCcceEEEeeccc--CCCceEccCC-CccCCCCcEEEEEecCCC-CCEEEEEECCCccCcc----ccCC--CceE
Confidence 122333322111 1255554443 457889999999998765 4599999998655421 1111 1227
Q ss_pred eEEEcCCCCCCCeeEEEEEEccc--ccceecceEEEEecc
Q psy2441 171 ALQITNSIEEDQGKYECVAENEV--GTEYSPSTMLYVKGT 208 (212)
Q Consensus 171 ~l~i~~~~~~d~g~y~C~a~n~~--g~~~~~~~~l~v~~~ 208 (212)
.|.|.+++.+|+|.|.|.+.|.. ....+..+.|.|.+.
T Consensus 153 ~l~I~~v~~~d~G~Y~C~a~n~~~~~s~~S~~~~l~V~~~ 192 (242)
T 1p6f_A 153 EFPLGPVTTAHRGTYRCFGSYNNHAWSFPSEPVKLLVTGD 192 (242)
T ss_dssp EEEEEECCGGGCEEEEEEEEEETTEECCCCCCEEEEEEC-
T ss_pred EEEeCCCccccCEEEEEEEECCCCcccCCCCCEEEEEecc
Confidence 89999999999999999999864 334444478888764
No 113
>2y25_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin-like D; 3.50A {Homo sapiens}
Probab=99.83 E-value=7.2e-21 Score=139.60 Aligned_cols=174 Identities=16% Similarity=0.118 Sum_probs=118.4
Q ss_pred CCCCeEEeCCCccEEeeCCeEEEEcccCCC-CCCcEEEEeCCEEecCCCC-------CeeEEeec--CCCCeEEEeeeCC
Q psy2441 27 PGFPQITEAPSTKVVEISHTTVLHCSASGN-PPPKISWIREMLPVDTSRN-------PRYNLLTS--GAPGTYIKIKPNL 96 (212)
Q Consensus 27 ~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~-p~~~v~W~k~g~~l~~~~~-------~~~~~~~~--~~~g~~l~i~~~~ 96 (212)
..+|.|.... +..+.+|+.+.|.|.+.+. |.+.+.|+|+|..+..... ..+.+... +|.|.|.|.....
T Consensus 5 ~~~P~~~~~~-~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~ 83 (317)
T 2y25_A 5 FTGPHFVEYL-SWEVTGECNVLLKCKVANIKKETHIVWYKDEREISVDEKHDFKDGICTLLITEFSKKDAGIYEVILKDD 83 (317)
T ss_dssp SSCCEEEEEE-EEEEETTTEEEEEEEEESCCTTCEEEEEETTEEECCSCC-----CCEEEEETTCCSTTCSCEEEEEESS
T ss_pred cCCCcEeeee-eEEECCCCeEEEEEEEcCCCCCCEEEEEECCeEcCCCCcEEEECCeEEEEEccCCcccCeEEEEEEECC
Confidence 3578887444 5889999999999999876 7789999999998875411 12222222 4888899987764
Q ss_pred ccceeEEeecCCCCCCCccccCCcceeEecCCcEEEEEeeee----------CCCCceEEEeCCEEecCCCCCceEEcCC
Q psy2441 97 FSPLSVYSADKIPPGFPQITEAPSTKVVEISHTTVLHCSASG----------NPPPKISWIREMLPVDTSRNPRYNLLTS 166 (212)
Q Consensus 97 ~~~~~v~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~----------~p~~~i~W~~~~~~~~~~~~~~~~~~~~ 166 (212)
...........+. .+|.+...+....+..|+.+.|.|.+.+ .|.+.+.|++++..+... .++.....
T Consensus 84 ~g~~~~~~~l~v~-~~~~~~~~~~~~~~~~g~~~~l~c~~~~~~l~c~~~~~~p~~~i~W~~~~~~~~~~--~~~~~~~~ 160 (317)
T 2y25_A 84 RGKDKSRLKLVDE-AFKELMMEVCKKIALSATDLKIQSTAEGIQLYSFVTYYVEDLKVNWSHNGSAIRYS--DRVKTGVT 160 (317)
T ss_dssp SCEEEEEECCSTH-HHHHHHHHHHHHHHTCBCCCEEEECSSEEEEEEEBSSCCSSCEEEEEESSSBCCCC--SSEEEEEC
T ss_pred CCcEEEEEEEEEe-cCccccccCCceecccCCCeEEEeeccccEEEEEeccCCCCcEEEEEECCEECCCC--CCeEEecc
Confidence 3332222211111 0122222222334556888888888776 788999999999888764 45555444
Q ss_pred CCceeEEEcCCCCCCCeeEEEEEEcccccceecceEEEE
Q psy2441 167 GAPGALQITNSIEEDQGKYECVAENEVGTEYSPSTMLYV 205 (212)
Q Consensus 167 ~~~~~l~i~~~~~~d~g~y~C~a~n~~g~~~~~~~~l~v 205 (212)
+....|.|.++..+|.|.|.|.|.|..|..... +.+.+
T Consensus 161 ~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~-~~l~v 198 (317)
T 2y25_A 161 GEQIWLQINEPTPNDKGKYVMELFDGKTGHQKT-VDLSG 198 (317)
T ss_dssp SSEEEEEEESCCGGGCEEEEEEEECSSCEEEEE-EEECH
T ss_pred CCEEEEEECcCCcccCeeEEEEEEeCCceEEEE-EEEee
Confidence 444679999999999999999999988877655 55543
No 114
>1vca_A VCAM-D1,2, human vascular cell adhesion molecule-1; immunoglobulin superfamily, integrin-binding, cell adhesion protein; 1.80A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ij9_A 1vsc_A
Probab=99.83 E-value=1.5e-19 Score=124.68 Aligned_cols=158 Identities=18% Similarity=0.283 Sum_probs=99.6
Q ss_pred EEeCCCccE-EeeCCeEEEEcccCCCCCCcEEEEeCC-EEe-----cCCCCCeeEEeec--CCCCeEEEeeeCC------
Q psy2441 32 ITEAPSTKV-VEISHTTVLHCSASGNPPPKISWIREM-LPV-----DTSRNPRYNLLTS--GAPGTYIKIKPNL------ 96 (212)
Q Consensus 32 ~~~~~~~~~-v~~g~~v~l~C~~~~~p~~~v~W~k~g-~~l-----~~~~~~~~~~~~~--~~~g~~l~i~~~~------ 96 (212)
+.+.|.+.. +.+|+.+.|.|.+.|.|.+.|.|+++. .++ .......+.+... .|.|.|.|...+.
T Consensus 3 v~i~p~~~~~~~~G~~v~L~C~~~g~P~p~i~W~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~ 82 (202)
T 1vca_A 3 IETTPESRYLAQIGDSVSLTCSTTGCESPFFSWRTQIDSPLNGKVTNEGTTSTLTMNPVSFGNEHSYLCTATCESRKLEK 82 (202)
T ss_dssp EEEESSSEEEEETTSCEEEEEEEESCSSCEEEEEETTCCCCSSEEEEETTEEEEEESSCCGGGCSEEEEEEEETTEEEEE
T ss_pred EEECCCCcEEEcCCCcEEEEEeecCCCCCeEEEECCCCCCccceEEEcCCccEEEECcCCHHHCEEEEEEEEECCceEee
Confidence 444555544 459999999999999999999999942 211 1111123444432 4889999988763
Q ss_pred ccceeEEeecCCCCCCCccccCCcceeEecCCcEEEEEeeeeCCC---CceEEEeCCEEecCCCC-CceEE-cCCCCcee
Q psy2441 97 FSPLSVYSADKIPPGFPQITEAPSTKVVEISHTTVLHCSASGNPP---PKISWIREMLPVDTSRN-PRYNL-LTSGAPGA 171 (212)
Q Consensus 97 ~~~~~v~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~---~~i~W~~~~~~~~~~~~-~~~~~-~~~~~~~~ 171 (212)
...+.|.. ++..+.+ .+. ..+.+|+.+.|.|.+.+.++ +.|.|++++..+..... ..... ........
T Consensus 83 ~~~l~V~~----~p~~~~~--~~~-~~~~~G~~~~L~C~~~~~~p~~~~~i~W~k~~~~l~~~~~~~~~~~~~~~~~~~~ 155 (202)
T 1vca_A 83 GIQVEIYS----FPKDPEI--HLS-GPLEAGKPITVKCSVADVYPFDRLEIDLLKGDHLMKSQEFLEDADRKSLETKSLE 155 (202)
T ss_dssp EEEEEEEB----CCSCCEE--EES-SCEETTSCEEEEEEEEEEBSGGGEEEEEEETTEEEEEEECCSCCSSCCCEEEEEE
T ss_pred EEEEEEEe----CCCCCEe--CCc-eEEcCCCCEEEEEEECCcCCCCCeEEEEEeCCeECcccccccccCcCcceEEEEE
Confidence 22333332 2212222 222 55788999999999987543 37899999987754200 00000 00011245
Q ss_pred EEEcCCCCCCCeeEEEEEEcccccc
Q psy2441 172 LQITNSIEEDQGKYECVAENEVGTE 196 (212)
Q Consensus 172 l~i~~~~~~d~g~y~C~a~n~~g~~ 196 (212)
|.|.....+|.|.|+|.|.|..|..
T Consensus 156 l~i~~~~~d~~g~ytC~A~n~~~~~ 180 (202)
T 1vca_A 156 VTFTPVIEDIGKVLVCRAKLHIDEM 180 (202)
T ss_dssp EEECCCGGGTTCEEEEEEEECSCCC
T ss_pred EEEEeeeccCCCeEEEEEEccccCC
Confidence 6788888888999999999988763
No 115
>4frw_A Poliovirus receptor-related protein 4; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; 3.50A {Homo sapiens}
Probab=99.82 E-value=8.5e-20 Score=126.63 Aligned_cols=170 Identities=14% Similarity=0.171 Sum_probs=106.8
Q ss_pred eCCCccEEeeCCeEEEEcccCCCCCC---cEEEEeCCEEecCC----------------CCC--------------eeEE
Q psy2441 34 EAPSTKVVEISHTTVLHCSASGNPPP---KISWIREMLPVDTS----------------RNP--------------RYNL 80 (212)
Q Consensus 34 ~~~~~~~v~~g~~v~l~C~~~~~p~~---~v~W~k~g~~l~~~----------------~~~--------------~~~~ 80 (212)
..|..+++.+|+++.|.|.+.+.|.+ .|.|+|++..+... ... .+.+
T Consensus 4 ~~p~~vtv~~G~~v~L~C~v~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~sL~I 83 (218)
T 4frw_A 4 ETSDVVTVVLGQDAKLPCFYRGDSGEQVGQVAWARVDAGEGAQELALLHSKYGLHVSPAYEGRVEQPPPPRNPLDGSVLL 83 (218)
T ss_dssp ECCSEEEEETTSCEEECCEECCCTTCEEEEEEEEEECSSSCEEEEEEEETTTEEEECGGGTTTEECCSSCCCTTBCCEEE
T ss_pred eCCCeEEEEcCCCEEEEEEEEcCCCCCccEEEEEECCCCCCceeEEEecCCCCeEeCccccceEEEecccccCCeEEEEE
Confidence 35667889999999999999887765 48999976433210 001 1222
Q ss_pred eec--CCCCeEEEeeeCCcc--ceeEEeecCCCCCCCccccCCcceeEecCCcEEEEEeeeeCCCCceEEEeCCEEecCC
Q psy2441 81 LTS--GAPGTYIKIKPNLFS--PLSVYSADKIPPGFPQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREMLPVDTS 156 (212)
Q Consensus 81 ~~~--~~~g~~l~i~~~~~~--~~~v~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~ 156 (212)
... +|.|.|.|....... ...........+ ++..........+..|+.+.+.|.+.+.|.|.|.|++++..+...
T Consensus 84 ~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~c~~~g~p~p~i~W~~~~~~~~~~ 162 (218)
T 4frw_A 84 RNAVQADEGEYECRVSTFPAGSFQARLRLRVLVP-PLPSLNPGPALEEGQGLTLAASCTAEGSPAPSVTWDTEVKGTTSS 162 (218)
T ss_dssp SSCCGGGCEEEEEEEEEETTEEEEEEEEEEEEBC-CCCEEEECSCEETTCCSEEEEEEEEEEBSCCEEEEEESSCCEEEE
T ss_pred eeccHHHCCceeEEEEeccCceeeeEEEEEEeee-ccceeeeeeeeeeeeccccceeeeccCCcCceEEEEECCcccccC
Confidence 222 367777776543111 111000000001 122222333455667889999999999999999999998766543
Q ss_pred CCCceEEcCC-CCceeEEEcCCCCCCCeeEEEEEEcccccceecceEEEEec
Q psy2441 157 RNPRYNLLTS-GAPGALQITNSIEEDQGKYECVAENEVGTEYSPSTMLYVKG 207 (212)
Q Consensus 157 ~~~~~~~~~~-~~~~~l~i~~~~~~d~g~y~C~a~n~~g~~~~~~~~l~v~~ 207 (212)
..+..... ...+.|.|.++..+|.|.|+|.|.|..|..... +++.|.+
T Consensus 163 --~~~~~~~~~~~~s~L~i~~~~~~d~g~YtC~a~N~~g~~~~~-~t~~v~V 211 (218)
T 4frw_A 163 --RSFKHSRSAAVTSEFHLVPSRSMNGQPLTCVVSHPGLLQDQR-ITHILHV 211 (218)
T ss_dssp --EEEECSSSEEEEEEEEECCCGGGTTCEEEEEEECTTCSSCEE-EEEECCE
T ss_pred --ceEecCCcEEEEEEEEEeeCCHHhCeEEEEEEEeCCCCeEEE-EEEEEEE
Confidence 11111000 012579999999999999999999999988766 7776655
No 116
>1ry7_B FGFR-3, fibroblast growth factor receptor 3; FGF-FGFR complex, beta trefoil, IG domain, growth factor/growth factor receptor complex; 3.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.82 E-value=2.4e-20 Score=137.90 Aligned_cols=171 Identities=23% Similarity=0.362 Sum_probs=69.7
Q ss_pred CCCccEEeeCCeEEEEcccCCC-CCCcEEEEeCCEEecCCC-----CCeeEEeec--CCCCeEEEeeeCC-----cccee
Q psy2441 35 APSTKVVEISHTTVLHCSASGN-PPPKISWIREMLPVDTSR-----NPRYNLLTS--GAPGTYIKIKPNL-----FSPLS 101 (212)
Q Consensus 35 ~~~~~~v~~g~~v~l~C~~~~~-p~~~v~W~k~g~~l~~~~-----~~~~~~~~~--~~~g~~l~i~~~~-----~~~~~ 101 (212)
.+....+.+|+.+.|.|.+.+. |.+.+.|+|+|..+.... ...+.+... +|.|.|.|..... ...+.
T Consensus 14 ~~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~k~g~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~~~~~~~~l~ 93 (334)
T 1ry7_B 14 QQEQLVFGSGDAVELSCPPPGGGPMGPTVWVKDGTGLVPSERVLVGPQRLQVLNASHEDSGAYSCRQRLTQRVLCHFSVR 93 (334)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CcCcEEEecCCcEEEEeeCCCCCCCcceEEEECCeeCCCcccEEeccceEEEeecccccCEEEEEEEEeCCeEEEEEEEE
Confidence 3778889999999999999876 568999999998876531 112222221 4788999877653 22233
Q ss_pred EEeecCCC---------------CCCCccccC----CcceeEecCCcEEEEEeeeeCCCCceEEEeCCEEecCCCCCce-
Q psy2441 102 VYSADKIP---------------PGFPQITEA----PSTKVVEISHTTVLHCSASGNPPPKISWIREMLPVDTSRNPRY- 161 (212)
Q Consensus 102 v~~~~~~~---------------~~~p~~~~~----~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~- 161 (212)
|....... ..+|.+... .....+.+|+.+.|.|.+.+.|.+.+.|++++..+... .++
T Consensus 94 V~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~p~~~~~~~~~v~~g~~v~l~C~~~g~p~~~v~W~~~~~~~~~~--~~~~ 171 (334)
T 1ry7_B 94 VTDAPSSGDDEDGEDEAEDTGVDTGAPYWTRPERMDKKLLAVPAANTVRFRCPAAGNPTPSISWLKNGREFRGE--HRIG 171 (334)
T ss_dssp -------------------------CCCCSCCTTCCCCEEEEETTCCEEEECCCCCSSCCEEECCBTTBCCCTT--SSTT
T ss_pred EeccCccccccccccccccccccCCCCEEeccccccceeEEecCCCcEEEEEEccCCCCCeEEEEECCEECccc--cccc
Confidence 32211000 012433322 12356888999999999999999999999999887654 111
Q ss_pred EEcCCCCceeEEEcCCCCCCCeeEEEEEEcccccceecceEEEEecc
Q psy2441 162 NLLTSGAPGALQITNSIEEDQGKYECVAENEVGTEYSPSTMLYVKGT 208 (212)
Q Consensus 162 ~~~~~~~~~~l~i~~~~~~d~g~y~C~a~n~~g~~~~~~~~l~v~~~ 208 (212)
..........|.|.++..+|.|.|.|.|.|..|..... +.|.|...
T Consensus 172 ~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~-~~l~V~~~ 217 (334)
T 1ry7_B 172 GIKLRHQQWSLVMESVVPSDRGNYTCVVENKFGSIRQT-YTLDVLER 217 (334)
T ss_dssp CCCCCTTTTEEEECSCCGGGCCCEEEEEEETTEEEEEE-EEEEEECC
T ss_pred ceecccceEEEEECCCCcccCEEEEEEEEeCCCCEEEE-EEEEEecC
Confidence 11111223689999999999999999999999887766 77877653
No 117
>4i0k_A CD276 antigen; immunoglobulin domain, glycoprotein, immunity, adaptive IMMU structural genomics, protein structure initiative; HET: NAG BMA MAN; 2.97A {Mus musculus}
Probab=99.82 E-value=6.8e-20 Score=127.93 Aligned_cols=169 Identities=18% Similarity=0.293 Sum_probs=104.7
Q ss_pred CccEEeeCCeEEEEcccCCCCC-----CcEEEEeCCEEe-----------cCCCCCe--------------eEEeec--C
Q psy2441 37 STKVVEISHTTVLHCSASGNPP-----PKISWIREMLPV-----------DTSRNPR--------------YNLLTS--G 84 (212)
Q Consensus 37 ~~~~v~~g~~v~l~C~~~~~p~-----~~v~W~k~g~~l-----------~~~~~~~--------------~~~~~~--~ 84 (212)
..+.+.+|+++.|.|.+.+.|. +.+.|+|++... ......| +.+... .
T Consensus 3 ~~v~~~~G~~v~L~C~~~~~~~~~~~~~~v~W~~~~~~~~i~~~~~~~~~~~~~~~r~~~~~~~~~~~~~sL~I~~v~~~ 82 (222)
T 4i0k_A 3 DPVVALVDTDATLRCSFSPEPGFSLAQLNLIWQLTDTKQLVHSFTEGRDQGSAYSNRTALFPDLLVQGNASLRLQRVRVT 82 (222)
T ss_dssp CCCCCCTTSCEEECCBCCCCTTCCTTTEEEEEEETTTCCEEEEEETTEEEEESSCSCEECCTTTGGGTBCCEEECSCCGG
T ss_pred CCEEEECCCCeEEEEEecCCCCCCCCceEEEEEECCCccEEEEEcCCcccccceeCcEEEecccccCCeEEEEECCcccc
Confidence 3456789999999999987654 679999986332 0000122 333322 4
Q ss_pred CCCeEEEeeeC-----CccceeEEeecCCCCCCCccccCCcceeEecCCcEEEEEee-eeCCCCceEEEeC-CEEecCCC
Q psy2441 85 APGTYIKIKPN-----LFSPLSVYSADKIPPGFPQITEAPSTKVVEISHTTVLHCSA-SGNPPPKISWIRE-MLPVDTSR 157 (212)
Q Consensus 85 ~~g~~l~i~~~-----~~~~~~v~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~-~~~p~~~i~W~~~-~~~~~~~~ 157 (212)
|.|.|.|.... ....+.|.. ++..|.+...+. ..+.+|+.+.|.|.+ .+.|.+.+.|+++ +..+....
T Consensus 83 D~G~Y~C~~~~~~~~~~~~~l~V~~----~~~~p~i~~~~~-~~v~~G~~~~l~C~~~~g~P~~~v~W~~~~~~~~~~~~ 157 (222)
T 4i0k_A 83 DEGSYTCFVSIQDFDSAAVSLQVAA----PYSKPSMTLEPN-KDLRPGNMVTITCSSYQGYPEAEVFWKDGQGVPLTGNV 157 (222)
T ss_dssp GCSCEEEEEEECCCCCCCCCCCCCB----CCCCCEEECCC------CCSEEEEEEEEEEEBSCCEEEEECTTSCBCCSEE
T ss_pred cCEEEEEEEEeCCCceEEEEEEEEc----CCCCCcEEeCCC-ceecCCceEEEEEecccccCCCeEEEEcCCCccCCCCc
Confidence 78888887764 112222221 222344444432 356789999999999 8899999999994 44443220
Q ss_pred CCceEEcCCCCceeEEEcCCCCCCCeeEEEEEEcccccceecceEEEEecceec
Q psy2441 158 NPRYNLLTSGAPGALQITNSIEEDQGKYECVAENEVGTEYSPSTMLYVKGTQVD 211 (212)
Q Consensus 158 ~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~n~~g~~~~~~~~l~v~~~~~p 211 (212)
........++....|.|.++..+|.|.|+|.|.|..|..... +.|.|.+++..
T Consensus 158 ~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~-~~l~V~~~p~~ 210 (222)
T 4i0k_A 158 TTSQMANERGLFDVHSVLRVVLGANGTYSCLVRNPVLQQDAH-GSVTITGQPLT 210 (222)
T ss_dssp EEEEEECTTSCEEEEEEEEEECCTTCEEEEEEEETTTTEEEE-EEEECCC----
T ss_pred ceeEEcCCCCeEEEEEEEEEEeCCCCEEEEEEECCCCCCceE-EEEEEeCCccc
Confidence 111111222223458899999999999999999999998877 88888776543
No 118
>1nkr_A P58-CL42 KIR; inhibitory receptor, natural killer cells, immunological receptors, immunoglobulin fold; 1.70A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1m4k_A 1efx_D 2dli_A 2dl2_A 3h8n_A
Probab=99.82 E-value=4.2e-19 Score=122.24 Aligned_cols=170 Identities=17% Similarity=0.197 Sum_probs=108.4
Q ss_pred CCCCeEEeCCCccEEeeCCeEEEEcccCCCCCCcEEEEeCCEEecCC----------CCCeeEEeec--CCCCeEEEeee
Q psy2441 27 PGFPQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREMLPVDTS----------RNPRYNLLTS--GAPGTYIKIKP 94 (212)
Q Consensus 27 ~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~k~g~~l~~~----------~~~~~~~~~~--~~~g~~l~i~~ 94 (212)
..+|.+...|. ..+.+|++++|.|.+.+ +.+.+.|||+|..+... ....+.+... .|.|.|.|...
T Consensus 6 ~~~P~i~~~p~-~~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~~~~~~~~~~~~~~~l~I~~v~~~D~G~Y~C~a~ 83 (201)
T 1nkr_A 6 HRKPSLLAHPG-PLVKSEETVILQCWSDV-MFEHFLLHREGMFNDTLRLIGEHHDGVSKANFSISRMTQDLAGTYRCYGS 83 (201)
T ss_dssp -CCCEEEEESC-SEEETTCCEEEEEEESS-CCSEEEEEEESSSCEEEEEECEEETTEEEEEEEESSCCGGGCEEEEEEEE
T ss_pred CCCCeEEEEcC-CccCCCCcEEEEEeccC-CCCEEEEEECCCcCCcceeeeecCCCCceEEEEeccCCcccCeEEEEeEe
Confidence 35778877776 77899999999999974 67789999998654310 0123444332 48899999874
Q ss_pred CC---------ccceeEEeecCCCCCCCccccCCcceeEecCCcEEEEEeeeeCCCCceEEEeCCEEecCCCCCceEEcC
Q psy2441 95 NL---------FSPLSVYSADKIPPGFPQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREMLPVDTSRNPRYNLLT 165 (212)
Q Consensus 95 ~~---------~~~~~v~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~ 165 (212)
.. ...+.+..... ...|.+...+. ..+.+|+.+.|.|.+.+ +.+.+.|++++..+... ........
T Consensus 84 ~~~~~~~~~~~s~~~~l~V~~~--~~~p~i~~~p~-~~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~-~~~~~~~~ 158 (201)
T 1nkr_A 84 VTHSPYQVSAPSDPLDIVIIGL--YEKPSLSAQPG-PTVLAGENVTLSCSSRS-SYDMYHLSREGEAHERR-LPAGPKVN 158 (201)
T ss_dssp BTTBTTCCCCCCCCEEEEEECS--SCCCEEEEESC-SEECTTCEEEEEEEESS-CCSEEEEEETTCSSCEE-EECEEEET
T ss_pred cCCCCccccCCCCCEEEEeecc--CCCCceecCCC-CccCCCCeEEEEEeCCC-CCceEEEEECCcccCcc-cccccccC
Confidence 31 11222222211 12355555444 46789999999999976 56789999998765432 00111111
Q ss_pred CCCceeEEEcCCCCCCCeeEEEEEEccc----ccceecceEEEE
Q psy2441 166 SGAPGALQITNSIEEDQGKYECVAENEV----GTEYSPSTMLYV 205 (212)
Q Consensus 166 ~~~~~~l~i~~~~~~d~g~y~C~a~n~~----g~~~~~~~~l~v 205 (212)
......|.|.+++ |+|.|.|.|.+.. .+..++.+.|.|
T Consensus 159 ~~~~~~L~i~~v~--d~G~Y~C~a~~~~~~~~~s~~S~~~~l~V 200 (201)
T 1nkr_A 159 GTFQADFPLGPAT--HGGTYRCFGSFHDSPYEWSKSSDPLLVSV 200 (201)
T ss_dssp TEEEEEEEEEECC--SCEEEEEEEEETTEEEEECCCCCCEEEEE
T ss_pred CceEEEEEeCCcC--CCeeEEEEEEcCCCCCcCCCCCCCEEEEe
Confidence 1112689999998 9999999998642 233334355554
No 119
>1wio_A CD4, T-cell surface glycoprotein CD4; immunoglobulin fold, transmembrane, MHC lipoprotein, polymorphism; 3.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1 b.1.1.3 b.1.1.3 PDB: 1wip_A 1wiq_A 3t0e_E
Probab=99.82 E-value=9.5e-20 Score=136.34 Aligned_cols=159 Identities=13% Similarity=0.110 Sum_probs=104.8
Q ss_pred ceeeEEEeeccCCCcceecccccCCCCCeEEeCCCccEEeeCCeEEEEcccCC-----CCCCcEEEEeCCEEecCC----
Q psy2441 3 IGTYIKIKPNLFSPLSVYSADKIPPGFPQITEAPSTKVVEISHTTVLHCSASG-----NPPPKISWIREMLPVDTS---- 73 (212)
Q Consensus 3 ~g~Y~C~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~-----~p~~~v~W~k~g~~l~~~---- 73 (212)
+|.|+|.+.|..+..... ..+.+..+|.. +....+.+|+.+.|.|.+.+ .|.+.+.|+|+|..+...
T Consensus 154 ~G~Y~C~a~~~~~~~~~~-~~l~v~~~p~~---~~~~~~~~G~~v~l~C~~~~~~~~~~P~p~i~W~~~g~~~~~~~~~~ 229 (363)
T 1wio_A 154 SGTWTCTVLQNQKKVEFK-IDIVVLAFQKA---SSIVYKKEGEQVEFSFPLAFTVEKLTGSGELWWQAERASSSKSWITF 229 (363)
T ss_dssp CEECEEEEEETTEEEEEC-CEECEECCSCS---EEEEEEETBCCEEEECCCCCCCCSSCEEEEEEEEESSCCCCCCEEEE
T ss_pred CCEEEEEEecCCCeEEEE-EEEEEecCCCC---CCceEEecCCEEEEEEEEecccccCCCceeEEEecCCCCccceEEEE
Confidence 599999999865443322 22333333332 24567889999999998877 778899999999877541
Q ss_pred --CCCeeEE---------------------eec--CCCCeEEEeeeCC--ccceeEEeecCCCCCCCccccCCcceeEec
Q psy2441 74 --RNPRYNL---------------------LTS--GAPGTYIKIKPNL--FSPLSVYSADKIPPGFPQITEAPSTKVVEI 126 (212)
Q Consensus 74 --~~~~~~~---------------------~~~--~~~g~~l~i~~~~--~~~~~v~~~~~~~~~~p~~~~~~~~~~~~~ 126 (212)
...++.+ ... +|.|.|.|...+. ......... +. .....
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~~~g~~~~~~~---------l~-----V~~v~ 295 (363)
T 1wio_A 230 DLKNKEVSVKRVTQDPKLQMGKKLPLHLTLPQALPQYAGSGNLTLALEAKTGKLHQEVN---------LV-----VMRAT 295 (363)
T ss_dssp EECSSCEEEEEEECSSCCBCCSSSSCEEEESSBCGGGCEEEEEEECBTTTTCCEEEEEE---------EE-----EEEEC
T ss_pred EecCCeeeccccccchhhhcccCCceEEEEccCCcCcCcEEEEEEEEhhhcCeEEEEEe---------EE-----EEEec
Confidence 0122222 111 2555566655443 221111110 00 00123
Q ss_pred CCcEEEEEeeeeCCCCc--eEEEeCCEEecCCCCCceEEcCCCCceeEEEcCCCCCCCeeEEEEEEcc
Q psy2441 127 SHTTVLHCSASGNPPPK--ISWIREMLPVDTSRNPRYNLLTSGAPGALQITNSIEEDQGKYECVAENE 192 (212)
Q Consensus 127 g~~~~l~C~~~~~p~~~--i~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~n~ 192 (212)
|+.+.|.|.+.+.|.|. +.|++++..+... ..|.|.++..+|+|.|.|.|.|.
T Consensus 296 g~~~~l~C~~~g~p~p~~~i~W~~~~~~~~~~-------------~~l~i~~v~~~d~G~Y~C~a~~~ 350 (363)
T 1wio_A 296 QLQKNLTCEVWGPTSPKLMLSLKLENKEAKVS-------------KREKAVWVLNPEAGMWQCLLSDS 350 (363)
T ss_dssp CCSSSEEEEEESSCCTTCCEEEECSSSSCSEE-------------ESSSEEEESSCCSEEEEEEECSS
T ss_pred CCCeeEEEEEccccCCCccEEEEeCCCceeee-------------eeeeeeeeccccceeEEEEEecC
Confidence 88999999999999988 9999998766532 56788899999999999999975
No 120
>1igt_B IGG2A intact antibody - MAB231; intact immunoglobulin V region C region, immunoglobulin; HET: NAG FUL BMA MAN GAL FUC; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=99.82 E-value=1.4e-19 Score=138.89 Aligned_cols=194 Identities=15% Similarity=0.148 Sum_probs=118.3
Q ss_pred ceeeEEEeeccCCCc--ceecccccCC----CCCeEEeCCCccEEeeCCeEEEEcccCCC-CCC-cEEEEeCCEEecC--
Q psy2441 3 IGTYIKIKPNLFSPL--SVYSADKIPP----GFPQITEAPSTKVVEISHTTVLHCSASGN-PPP-KISWIREMLPVDT-- 72 (212)
Q Consensus 3 ~g~Y~C~~~~~~~~~--~~~~~~~~~~----~~p~~~~~~~~~~v~~g~~v~l~C~~~~~-p~~-~v~W~k~g~~l~~-- 72 (212)
+|.|+|.+.|..+.. ......+.+. .+|.+...+....+.+|+.+.|.|.+.+. |.+ .|.|+|++..+..
T Consensus 91 ~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~~~~~~~~~ 170 (444)
T 1igt_B 91 TAMYYCARHGGYYAMDYWGQGTTVTVSSAKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHT 170 (444)
T ss_dssp CEEEEEEEECSSSCEEEEBCCEEEEECSCCCBCCEEEEECCCSSCCCSSCEEEEEEEEEEBSSCCEEEEGGGTBCTTEEE
T ss_pred CEEEEEEEecCCcccccccCcEEEEecCCCCCCCceeEecccccCCCCCcEEEEEEEcceeCCCcEEEEecCCCCCCeEe
Confidence 589999999875431 1111222222 35665533333345799999999999874 766 8999999865311
Q ss_pred C----CCCe------eEEeec--CCCCeEEEeeeCCccceeEEeecC-----------------CCCCCCcc-ccCCcce
Q psy2441 73 S----RNPR------YNLLTS--GAPGTYIKIKPNLFSPLSVYSADK-----------------IPPGFPQI-TEAPSTK 122 (212)
Q Consensus 73 ~----~~~~------~~~~~~--~~~g~~l~i~~~~~~~~~v~~~~~-----------------~~~~~p~~-~~~~~~~ 122 (212)
. .... +.+... +| |.|.|...+......+..... .....|.+ ...+...
T Consensus 171 ~~~~~~~~~~~~~s~L~i~~~~~~d-g~Y~C~a~n~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~v~~~~p~~~ 249 (444)
T 1igt_B 171 FPAVLQSDLYTLSSSVTVTSSTWPS-QSITCNVAHPASSTKVDKKIEPRGPTIKPCPPCKCPAPNLLGGPSVFIFPPKIK 249 (444)
T ss_dssp CCCEEETTEEEEEEEEEECSTTTTT-SCCEEEEEETTTTEEEEEECCCCCCSCCCCCCCSCCCSCCCCCCEEEEECCCHH
T ss_pred cCccccCCcEEEEEEEEEchhhcCC-CeEEEEEEeCCCCcceEEEeccCCCCcccCCccccCCcccCCCceEEecCCchh
Confidence 0 0012 222222 25 899998877433322221111 01112444 2333333
Q ss_pred e-EecCCcEEEEEeeeeCC----CCceEEEeCCEEecCCCCCceEEcCCC---CceeEEEcCCCCCCCeeEEEEEEcccc
Q psy2441 123 V-VEISHTTVLHCSASGNP----PPKISWIREMLPVDTSRNPRYNLLTSG---APGALQITNSIEEDQGKYECVAENEVG 194 (212)
Q Consensus 123 ~-~~~g~~~~l~C~~~~~p----~~~i~W~~~~~~~~~~~~~~~~~~~~~---~~~~l~i~~~~~~d~g~y~C~a~n~~g 194 (212)
. +.+|+.+.|.|.+.+.+ .+.+.|++++..+............++ ..+.|.|.++..+|.|.|.|.|.|..|
T Consensus 250 ~~~~~G~~~~L~C~~~g~~~~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~n~~~ 329 (444)
T 1igt_B 250 DVLMISLSPIVTCVVVDVSEDDPDVQISWFVNNVEVHTAQTQTHREDYNSTLRVVSALPIQHQDWMSGKEFKCKVNNKDL 329 (444)
T ss_dssp HHHCTTSCCEEEEEEEEECTTCCCCEEEEEETTEECSSTTCBCCEEECSSSEEEEEEEECCHHHHHTTCEEEEEEECTTC
T ss_pred heeecCCCcEEEEEEeecccCCCCeEEEEEECCccccCcccccceeCCCCcEEEEEEEEEcHHHhccCCcEEEEEEcCCC
Confidence 2 57899999999999874 369999999988764311111111111 135899999999999999999999988
Q ss_pred cce
Q psy2441 195 TEY 197 (212)
Q Consensus 195 ~~~ 197 (212)
...
T Consensus 330 ~~~ 332 (444)
T 1igt_B 330 PAP 332 (444)
T ss_dssp SSC
T ss_pred CCc
Confidence 663
No 121
>3vh8_G Killer cell immunoglobulin-like receptor 3DL1; immunoglobulin fold, natural killer cell receptor, immune SY; HET: NAG; 1.80A {Homo sapiens} PDB: 1im9_D
Probab=99.81 E-value=1.8e-18 Score=126.99 Aligned_cols=174 Identities=16% Similarity=0.146 Sum_probs=115.2
Q ss_pred CCCCeEEeCCCccEEeeCCeEEEEcccCCCCCCcEEEEeCCEEecCC-----CCCeeEEeec--CCCCeEEEeeeC----
Q psy2441 27 PGFPQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREMLPVDTS-----RNPRYNLLTS--GAPGTYIKIKPN---- 95 (212)
Q Consensus 27 ~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~k~g~~l~~~-----~~~~~~~~~~--~~~g~~l~i~~~---- 95 (212)
..+|.+...|. ..+.+|+.+.|.|.+.+. .+.+.|+|+|..+... ....+.+... .|.|.|.|....
T Consensus 22 ~~~P~i~~~p~-~~v~~G~~v~L~C~~~~~-~~~~~W~k~g~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~~~~~ 99 (316)
T 3vh8_G 22 QDKPFLSAWPS-AVVPRGGHVTLRCHYRHR-FNNFMLYKEDRIHIPIFHGRIFQESFNMSPVTTAHAGNYTCRGSHPHSP 99 (316)
T ss_dssp --CCEEEEESC-SEEETTSCEEEEEEBTTB-CCSEEEEESSCSSSCHHHHCCBSSCEEECSCCGGGCEEEEEEEBCSSSS
T ss_pred CCCCEeeccCC-CccCCCCCEEEEEEccCC-CceEEEEeCCCccceeecCCcceEEEEECCCCcccCeEEEEEEEcCCCC
Confidence 57888888887 678899999999999887 6789999999775431 1244555443 489999997642
Q ss_pred -----CccceeEEeecCCCCCCCccccCCcceeEecCCcEEEEEeeeeCCCCceEEEeCCEEecCCCCCceEEcCCCCce
Q psy2441 96 -----LFSPLSVYSADKIPPGFPQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREMLPVDTSRNPRYNLLTSGAPG 170 (212)
Q Consensus 96 -----~~~~~~v~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~ 170 (212)
....+.+.... ....|.+...+... +.+|+.+.|.|.+. .+.+.+.|++++..+... .............
T Consensus 100 ~~~~~~s~~~~l~V~~--~~~~p~~~~~~~~~-v~~G~~v~L~C~~~-~~~~~~~w~k~g~~~~~~-~~~~~~~~~~~~~ 174 (316)
T 3vh8_G 100 TGWSAPSNPVVIMVTG--NHRKPSLLAHPGPL-VKSGERVILQCWSD-IMFEHFFLHKEGISKDPS-RLVGQIHDGVSKA 174 (316)
T ss_dssp SSBCCCCCCEEEEEEC--SSCCCEEEEESCSE-EETTCCEEEEEEES-SCCSEEEEEETTCCSCCE-EEECEEETTEEEE
T ss_pred cceecCCCcEEEEEec--CCCCCeEEecCCCc-cCCCCeEEEEEcCC-CCCcEEEEEECCCccccc-eeeeeecCCCceE
Confidence 11223333221 11235555444444 78899999999994 456689999998766432 0011111111236
Q ss_pred eEEEcCCCCCCCeeEEEEEEcccccc----eecceEEEEec
Q psy2441 171 ALQITNSIEEDQGKYECVAENEVGTE----YSPSTMLYVKG 207 (212)
Q Consensus 171 ~l~i~~~~~~d~g~y~C~a~n~~g~~----~~~~~~l~v~~ 207 (212)
.|.|.+++.+|+|.|.|.|.|..|.. ....+.|.|.+
T Consensus 175 ~L~i~~v~~~D~G~Y~C~a~n~~g~~~~s~~s~~~~l~V~~ 215 (316)
T 3vh8_G 175 NFSIGPMMLALAGTYRCYGSVTHTPYQLSAPSDPLDIVVTG 215 (316)
T ss_dssp EEEECSCCGGGCEEEEEEEECTTCTTBCCCCCCCEEEEEEC
T ss_pred EEEECCCChhhCceEEEEEecCCCCccccCCCCCEEEEecC
Confidence 89999999999999999999987742 12226666654
No 122
>2ghw_B Anti-SARS SCFV antibody, 80R; S protein, neutralizing antibody, virus/viral protein/antibiotic complex; 2.30A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1
Probab=99.81 E-value=3.5e-18 Score=121.20 Aligned_cols=174 Identities=21% Similarity=0.277 Sum_probs=111.2
Q ss_pred CccEEeeCCeEEEEcccCCCC--CCcEEEEeCC--EEe---------------cCCCCCeeEEee-------------c-
Q psy2441 37 STKVVEISHTTVLHCSASGNP--PPKISWIREM--LPV---------------DTSRNPRYNLLT-------------S- 83 (212)
Q Consensus 37 ~~~~v~~g~~v~l~C~~~~~p--~~~v~W~k~g--~~l---------------~~~~~~~~~~~~-------------~- 83 (212)
....+.+|++++|.|.+.+.| .+.|.|||++ ..+ ......|+.+.. .
T Consensus 10 ~~~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~ 89 (247)
T 2ghw_B 10 GGGVVQPGKSLRLSCAASGFAFSSYAMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLR 89 (247)
T ss_dssp CCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEEETTTTEEEEEECSCC
T ss_pred CCEEEecCCcEEEEEEeccccCCCceEEEEEeCCCCceEEEEEEecCCCceeeCccccCcEEEEEeCCCCEEEEEECcCC
Confidence 457899999999999998877 5789999942 110 011123443322 1
Q ss_pred -CCCCeEEEeeeCC--c------cceeEEeecCC--------CCCCCccccCCcceeEecCCcEEEEEeeeeCCCCceEE
Q psy2441 84 -GAPGTYIKIKPNL--F------SPLSVYSADKI--------PPGFPQITEAPSTKVVEISHTTVLHCSASGNPPPKISW 146 (212)
Q Consensus 84 -~~~g~~l~i~~~~--~------~~~~v~~~~~~--------~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W 146 (212)
+|.|.|.|..... . ..+.|...... ...++.+...+....+.+|+.+.|.|.+.+.|.+.+.|
T Consensus 90 ~~D~G~Y~C~~~n~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~v~W 169 (247)
T 2ghw_B 90 AEDTAVYYCARDRSYYLDYWGQGTLVTVSSGGGGSGGGGSGGGGSETTLTQSPATLSLSPGERATLSCRASQSVRSNLAW 169 (247)
T ss_dssp GGGCEEEEEEEEETTEEEEECCCEEEEECSCC------------CCCCEEEECSEEEECTTSCEEEEEEESSCCTTCEEE
T ss_pred HHHCEEEEEeeeccCCccccCCceEEEEecccccccccccCCCCcceEEEccCCEEEecCCCcEEEEEEeCCCccceEEE
Confidence 3788888876653 1 12222211000 01123444455567788999999999999999899999
Q ss_pred Ee--CCEEec----------CCCCCceEEcCCCCceeEEEcCCCCCCCeeEEEEEEcccccceecceEEEEeccee
Q psy2441 147 IR--EMLPVD----------TSRNPRYNLLTSGAPGALQITNSIEEDQGKYECVAENEVGTEYSPSTMLYVKGTQV 210 (212)
Q Consensus 147 ~~--~~~~~~----------~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~n~~g~~~~~~~~l~v~~~~~ 210 (212)
++ ++..+. .....++.........+|.|.++..+|+|.|.|.|.|..+........|.|+....
T Consensus 170 ~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~~~~~~~g~~t~l~V~~~~~ 245 (247)
T 2ghw_B 170 YQQKPGQAPRPLIYDASTRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQRSNWPPTFGQGTKVEVKSGLV 245 (247)
T ss_dssp EEECTTSCCEEEEETTTEECTTCCTTEEEECSSSEEEEEECSCCGGGCEEEEEEECSSSSCEECCCEEEEECCSCC
T ss_pred EEECCCCCcEEEEEEeccCCCccCCCEEEecCCCeEEEEECcCCHHHCEEEEEEEccCCCceEcCCEEEEECCCCC
Confidence 99 444331 11134555444444568999999999999999999986554444447777774433
No 123
>2ocw_A Polymeric-immunoglobulin receptor; SC, secretory, antibody, immunity, immune system; NMR {Homo sapiens} PDB: 3chn_S 3cm9_S 3chn_J 3cm9_J
Probab=99.81 E-value=2.4e-18 Score=136.26 Aligned_cols=194 Identities=14% Similarity=0.076 Sum_probs=124.4
Q ss_pred ceeeEEEeeccCCCcceecccccCCCCCeEEeCCCccEEeeCCeEEEEcccCCCCC---CcEEEE-eCCEE---ecC-C-
Q psy2441 3 IGTYIKIKPNLFSPLSVYSADKIPPGFPQITEAPSTKVVEISHTTVLHCSASGNPP---PKISWI-REMLP---VDT-S- 73 (212)
Q Consensus 3 ~g~Y~C~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~---~~v~W~-k~g~~---l~~-~- 73 (212)
+|.|+|.+.|..+..... ..+.+..+| |..+.+.+|+.+.|.|.+ +.+. +.+.|+ ++|.. +.. .
T Consensus 197 ~G~Y~C~a~n~~g~~~~~-~~l~V~~~~-----p~~~~~~~G~~v~l~C~~-~~~~~~~~~~~w~~~~g~~~~~~~~~~~ 269 (585)
T 2ocw_A 197 AGQYLCQAGDDSNSNKKN-ADLQVLKPE-----PELVYEDLRGSVTFHCAL-GPEVANVAKFLCRQSSGENCDVVVNTLG 269 (585)
T ss_pred CeEEEEEeccCCccccce-EEEEEccCC-----CceeEEcCCCcEEEEEEc-CCCCCCceEEEEEeCCCCCcceEEeCCC
Confidence 589999999988764433 333332221 334567899999999998 4333 578886 88731 111 0
Q ss_pred -----CCCe-------------eEEeec--CCCCeEEEeeeCCcc-c-----eeEEeecCCCCCCCccccCCcceeEecC
Q psy2441 74 -----RNPR-------------YNLLTS--GAPGTYIKIKPNLFS-P-----LSVYSADKIPPGFPQITEAPSTKVVEIS 127 (212)
Q Consensus 74 -----~~~~-------------~~~~~~--~~~g~~l~i~~~~~~-~-----~~v~~~~~~~~~~p~~~~~~~~~~~~~g 127 (212)
...+ +.+... +|.|.|.|...+... . ..+..... .+|.+...+....+.+|
T Consensus 270 ~~~~~~~~~~~~~~~~~~g~~~L~i~~v~~~d~G~Y~C~a~n~g~~~~~~~~~~~~l~V~---~~p~~~~~~~~~~~~~G 346 (585)
T 2ocw_A 270 KRAPAFEGRILLNPQDKDGSFSVVITGLRKEDAGRYLCGAHSDGQLQEGSPIQAWQLFVN---EESTIPRSPTVVKGVAG 346 (585)
T ss_pred cCCcccCCceEeeccCCCcEEEEEEccCChhhCEEEEEEEEcCCCccccCceeeEEEEEe---cccccccCCcceEEEeC
Confidence 0122 233222 478888888776211 1 11111111 12555556677788899
Q ss_pred CcEEEEEeeeeCCCCce----EEEe--CCE--EecCC-------CCCceEEcCC--CCceeEEEcCCCCCCCeeEEEEEE
Q psy2441 128 HTTVLHCSASGNPPPKI----SWIR--EML--PVDTS-------RNPRYNLLTS--GAPGALQITNSIEEDQGKYECVAE 190 (212)
Q Consensus 128 ~~~~l~C~~~~~p~~~i----~W~~--~~~--~~~~~-------~~~~~~~~~~--~~~~~l~i~~~~~~d~g~y~C~a~ 190 (212)
+.+.|.|.+.+.|.+.+ .|++ ++. .+... ...++....+ .+..+|.|.+++.+|+|.|.|.|
T Consensus 347 ~~v~l~C~~~~~p~p~i~~w~~W~~~~~g~~~~l~~~~~~~~~~~~~r~~~~~~~~~g~~~L~I~~v~~~D~G~Y~C~a- 425 (585)
T 2ocw_A 347 SSVAVLCPYNRKESKSIKYWCLWEGAQNGRCPLLVDSEGWVKAQYEGRLSLLEEPGNGTFTVILNQLTSRDAGFYWCLT- 425 (585)
T ss_pred CcEEEEEecCCCCCccEEEEEEEEccCCCCCceeeeecceeecccCCCEEEeccCCCcEEEEEECCCChhhCEEEEEcc-
Confidence 99999999999999977 7999 776 33221 1234444432 22245999999999999999999
Q ss_pred cccccceecceEEEEecc
Q psy2441 191 NEVGTEYSPSTMLYVKGT 208 (212)
Q Consensus 191 n~~g~~~~~~~~l~v~~~ 208 (212)
|..|..... +.|.|...
T Consensus 426 n~~g~~~~~-~~l~V~~~ 442 (585)
T 2ocw_A 426 NGDTLWRTT-VEIKIIEG 442 (585)
T ss_pred cCCCcccee-EEEEEecC
Confidence 888887666 77777653
No 124
>2o26_X MAST/stem cell growth factor receptor; stem cell factor, receptor tyrosine kinase, class III, recep ligand complex, cytokine, 4-helix bundle; HET: NAG FUL MAN NDG; 2.50A {Mus musculus}
Probab=99.80 E-value=6.1e-19 Score=127.96 Aligned_cols=166 Identities=18% Similarity=0.194 Sum_probs=117.6
Q ss_pred CCCCeEEeCCCccEEeeCCeEEEEcccCCCCCCcEEEEeCCEEe--cCCCCCeeEEeec--CCCCeEEEeeeCCccceeE
Q psy2441 27 PGFPQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREMLPV--DTSRNPRYNLLTS--GAPGTYIKIKPNLFSPLSV 102 (212)
Q Consensus 27 ~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~k~g~~l--~~~~~~~~~~~~~--~~~g~~l~i~~~~~~~~~v 102 (212)
..+|.+...+....+.+|+.+.|.|.+.+ .+.|+|++..+ .......+.+... +|.|.|.|..... ....+
T Consensus 10 ~~~P~i~~~~~~~~v~~G~~v~l~C~~~~----~i~W~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~ng-~~~~~ 84 (290)
T 2o26_X 10 PSPPSIHPAQSELIVEAGDTLSLTCIDPD----FVRWTFKTYFNEMVENKKNEWIQEKAEATRTGTYTCSNSNG-LTSSI 84 (290)
T ss_dssp --CCEESSCSSEEEEETTSCEEEEEECTT----EEEEEEECSSSCEEEECSSEEEETTCCGGGCEEEEEEESSS-CEEEE
T ss_pred CCCCEEeCCCCeEEEcCCCcEEEEECCCC----cEEEecCCcceeeecCCCceEEEeccCHHhCeEEEEEeeCC-ccEEE
Confidence 46788877788889999999999999987 89999998766 1111244555433 4899999988762 12222
Q ss_pred EeecCCCCCCCccccCCcceeEecCCcEEEEEeeeeCCC-CceEEE-eCCEEecCCCCCceEEcCCCCceeEEEcCCCCC
Q psy2441 103 YSADKIPPGFPQITEAPSTKVVEISHTTVLHCSASGNPP-PKISWI-REMLPVDTSRNPRYNLLTSGAPGALQITNSIEE 180 (212)
Q Consensus 103 ~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~-~~i~W~-~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~ 180 (212)
......+ |.+...+....+.+|+.+.|.|.+.+ |. +.+.|+ +++..+... .++....+ ..|.|.++..+
T Consensus 85 ~l~V~~~---~~~~~~~~~~~~~~g~~v~l~C~~~~-p~~~~v~W~~~~g~~l~~~--~~~~~~~~---~~L~i~~v~~~ 155 (290)
T 2o26_X 85 YVFVRDP---AKLFLVGLPLFGKEDSDALVRCPLTD-PQVSQYSLIECDGKSLPTD--LTFVPNPK---AGITIKNVKRA 155 (290)
T ss_dssp EEEEECS---SCCBCCCCCEEEETTSCEEECCCBSC-CSCEEEEEEETTSCCCCTT--CEEEEETT---TEEEEESCCGG
T ss_pred EEEEeCC---CcccccccceEEecCCeEEEeCcCCC-CCCceEEEEeCCCcCCCCC--CceeeCCC---CCEEEecccHH
Confidence 2211122 33334555677889999999999985 77 899995 677766543 45555555 68999999999
Q ss_pred CCe-eEEEEEEcccccceecceEEEEe
Q psy2441 181 DQG-KYECVAENEVGTEYSPSTMLYVK 206 (212)
Q Consensus 181 d~g-~y~C~a~n~~g~~~~~~~~l~v~ 206 (212)
|.| .|.|.|.|..+......+.|.|.
T Consensus 156 d~G~~Y~C~a~n~~~~~~s~~~~l~V~ 182 (290)
T 2o26_X 156 YHRLCVRCAAQRDGTWLHSDKFTLKVR 182 (290)
T ss_dssp GTTCEEEEEEEETTEEEECCCEEEEEE
T ss_pred HCCCEEEEEEEECCceEEeEEEEEEEE
Confidence 999 99999999866655433677765
No 125
>3sbw_C Programmed cell death 1 ligand 1; PD-1, PD-L1, B7-H1, programmed death-1 ligand 1, complex, costimulatory, immune system; 2.28A {Homo sapiens} PDB: 3fn3_A 3bis_A 3bik_A
Probab=99.80 E-value=7.1e-19 Score=122.68 Aligned_cols=165 Identities=13% Similarity=0.107 Sum_probs=100.6
Q ss_pred CCCccEEeeCCeEEEEcccCCCCC-----CcEEEEeCCEEe---------cCCC----CCe--------------eEEee
Q psy2441 35 APSTKVVEISHTTVLHCSASGNPP-----PKISWIREMLPV---------DTSR----NPR--------------YNLLT 82 (212)
Q Consensus 35 ~~~~~~v~~g~~v~l~C~~~~~p~-----~~v~W~k~g~~l---------~~~~----~~~--------------~~~~~ 82 (212)
.+..+.+.+|+++.|.|.+.+.|. ..+.|+|++..+ .... ..| +.+..
T Consensus 7 p~~~v~~~~G~~v~L~C~~~~~p~~~~~~~~v~W~~~~~~v~~~~~g~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~ 86 (222)
T 3sbw_C 7 PKDLYVVEYGSNMTIECKFPVEKQLDLAALIVYWEMEDKNIIQFVHGEEDLKVQHSSYRQRARLLKDQLSLGNAALQITD 86 (222)
T ss_dssp SCSEEEEETTSCEEEEEECCCCSSCCTTTCEEEEEETTEEEEEEETTEECSSSSCGGGSSSEEECHHHHTTTEEEEEESS
T ss_pred CCccEEEEcCCcEEEEeEecCCCCCCCccEEEEEEECCcEEEEEeCCccccccccccccCceEEccccccCCEEEEEEcC
Confidence 345667889999999999977663 379999975322 1100 122 23332
Q ss_pred c--CCCCeEEEeeeCC-----ccceeEEeecCCCCCCCccccCCcceeEecCCcEEEEEeeeeCCCCceEEEeC-CEEec
Q psy2441 83 S--GAPGTYIKIKPNL-----FSPLSVYSADKIPPGFPQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIRE-MLPVD 154 (212)
Q Consensus 83 ~--~~~g~~l~i~~~~-----~~~~~v~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~-~~~~~ 154 (212)
. +|.|.|.|..... ...+.|. .++..|.. .....+..|+.+.|.|.+.|.|.|.+.|+++ +..+.
T Consensus 87 v~~~D~G~Y~C~~~~~~~~~~~~~l~V~----~~~~~~~~---~~~~~~~~g~~v~L~C~~~g~P~p~i~W~~~~g~~~~ 159 (222)
T 3sbw_C 87 VKLQDAGVYRCMISYGGADYKRITVKVN----APYNKINQ---RILVVDPVTSEHELTCQAEGYPKAEVIWTSSDHQVLS 159 (222)
T ss_dssp CCGGGCEEEEEEEESSSEEEEEEEEEEE----BCCCCCEE---EEEEEETTTTEEEEEEEEEEBSCCEEEEEETTCCEEC
T ss_pred cccccCeEEEEEEEeCCCceeEEEEEEE----CCCCCCCc---eeeeeecCCCcEEEEEEecCCCCCeEEEEECCCceec
Confidence 2 4888999987761 1222232 12111111 1112466799999999999999999999998 55544
Q ss_pred CCCCCceEEcC--CCCceeEEEcCCCCCCCeeEEEEEEcccccceecceEEEEecce
Q psy2441 155 TSRNPRYNLLT--SGAPGALQITNSIEEDQGKYECVAENEVGTEYSPSTMLYVKGTQ 209 (212)
Q Consensus 155 ~~~~~~~~~~~--~~~~~~l~i~~~~~~d~g~y~C~a~n~~g~~~~~~~~l~v~~~~ 209 (212)
.. ....... ++......+..+...|.|.|+|.|.|..|..... +.|.|.+.+
T Consensus 160 ~~--~~~~~~~~~~~~~~~~~~l~v~~~d~g~Y~C~a~n~~g~~~~~-~~l~v~~~p 213 (222)
T 3sbw_C 160 GK--TTTTNSKREEKLFNVTSTLRINTTTNEIFYCTFRRLDPEENHT-AELVIPELP 213 (222)
T ss_dssp CE--EEEEECC----CEEEEEEEEEECCTTCEEEEEEEETTTTEEEE-EEEECCCC-
T ss_pred Cc--cceEEEcCCCCCEEEEEEEEEeccCCcEEEEEEEeCccceeeE-EEEEecCCc
Confidence 32 1111111 1111122222345688999999999999988777 777776543
No 126
>3d9a_L Light chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_L 1xgp_A 1xgq_A 1xgr_A 1xgt_A 1dqq_A 1dqm_L 1dqj_A 1nby_A 1nbz_A 1ndg_A 1ndm_A 1xgu_A 1fh5_L 1bm3_L 1opg_L 1mlb_A 1mlc_A 1rih_L 1p2c_A ...
Probab=99.80 E-value=4.2e-19 Score=123.18 Aligned_cols=161 Identities=17% Similarity=0.267 Sum_probs=103.9
Q ss_pred EEeCCCccEEeeCCeEEEEcccCCCCCCcEEEEeCC--EEe----------cCCCCCeeEEe-----------ec--CCC
Q psy2441 32 ITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREM--LPV----------DTSRNPRYNLL-----------TS--GAP 86 (212)
Q Consensus 32 ~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~k~g--~~l----------~~~~~~~~~~~-----------~~--~~~ 86 (212)
+...|..+.+.+|+++.|.|.+.+.|.+.|.|||++ ..+ ......|+.+. .. +|.
T Consensus 4 v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~ 83 (213)
T 3d9a_L 4 LTQSPATLSVTPGNSVSLSCRASQSIGNNLHWYQQKSHESPRLLIKYASQSISGIPSRFSGSGSGTDFTLSINSVETEDF 83 (213)
T ss_dssp EEEECSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGGGC
T ss_pred EEeCCccEEEeCCCcEEEEEECCCCCCCCEEEEEeCCCCCcEEEEEEcccccccccccEEEEcCCCEEEEEECCCChhhC
Confidence 455677888999999999999999888899999853 211 11111333322 21 378
Q ss_pred CeEEEeeeCCc-------cceeEEeecCCCCCCCccccCCcceeEecCCcEEEEEeeee-CCCC-ceEEEeCCEEecCCC
Q psy2441 87 GTYIKIKPNLF-------SPLSVYSADKIPPGFPQITEAPSTKVVEISHTTVLHCSASG-NPPP-KISWIREMLPVDTSR 157 (212)
Q Consensus 87 g~~l~i~~~~~-------~~~~v~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~-~p~~-~i~W~~~~~~~~~~~ 157 (212)
|.|.|...... ..+.|.. ...+|.+...+....+..|+.+.|.|.+.+ .|.+ .+.|++++..+....
T Consensus 84 G~Y~C~~~~~~~~~~~~~~~l~V~~----~~~~p~v~~~~~~~~~~~g~~~~l~C~~~g~~p~~~~v~W~k~g~~~~~~~ 159 (213)
T 3d9a_L 84 GMYFCQQSNSWPYTFGGGTKLEIKR----ADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGV 159 (213)
T ss_dssp EEEEEEECSSSSCEECCCEEEEECC----CCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCCEEEEEETTEEECTTE
T ss_pred EEEEEeeecCCcceeCCCEEEEEec----CCCCceeEeECCChhhcCCCcEEEEEEEeeecCCceEEEEEcCCCcCccee
Confidence 88888876632 1233321 112355554333322346899999999987 6665 899999998876530
Q ss_pred CCceEEc--CCCC---ceeEEEcCCCCCCCeeEEEEEEcccccc
Q psy2441 158 NPRYNLL--TSGA---PGALQITNSIEEDQGKYECVAENEVGTE 196 (212)
Q Consensus 158 ~~~~~~~--~~~~---~~~l~i~~~~~~d~g~y~C~a~n~~g~~ 196 (212)
....... .++. .+.|.|.++..+|.|.|+|.|.|.....
T Consensus 160 ~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~ 203 (213)
T 3d9a_L 160 LNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTS 203 (213)
T ss_dssp EEEECCCCTTTCCEEEEEEEEEEHHHHHHCCEEEEEEECTTCSS
T ss_pred eecCCCccCCCCCEEEEEEEEEeccccCCCCEEEEEEEEccCCC
Confidence 0001011 1110 2489999999999999999999986654
No 127
>3oq3_B IFN-alpha/beta binding protein C12R; mousepox virus, moscow strain, cytokine decoy RE virus/viral protein, type-1 interferon, soluble A/B-IFNR; HET: EPE; 2.10A {Ectromelia virus}
Probab=99.80 E-value=4.4e-19 Score=131.08 Aligned_cols=152 Identities=13% Similarity=0.133 Sum_probs=106.2
Q ss_pred CccEEeeCCeEEEEcccCCC---------CCCcEEEEeCCEEecCC----CCCeeEEeec--CCCC-eEEEeeeCCcc--
Q psy2441 37 STKVVEISHTTVLHCSASGN---------PPPKISWIREMLPVDTS----RNPRYNLLTS--GAPG-TYIKIKPNLFS-- 98 (212)
Q Consensus 37 ~~~~v~~g~~v~l~C~~~~~---------p~~~v~W~k~g~~l~~~----~~~~~~~~~~--~~~g-~~l~i~~~~~~-- 98 (212)
..+.+.+|+.+.|.|.+.+. |.+.|.|||++..+... ....+.+... +|.| .|.|.......
T Consensus 37 ~~v~v~eG~~v~L~C~~~~~~~~~~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~L~i~~v~~~D~Gs~Y~C~a~n~~g~~ 116 (329)
T 3oq3_B 37 MNDMAALGEPFSAKCPPIEDSLLSHRYNDKDNVVNWEKIGKTRRPLNRRVKNGDLWIANYTSNDSHRRYLCTVTTKNGDC 116 (329)
T ss_dssp EEEEECTTSCEEECCHHHHCTTTGGGSCCTTCEEEEEECSSSCEECSTTEETTEEEESSCCGGGGGCCEEEEEECTTSCE
T ss_pred ceEEEECCCeEEEEccCCCCccccccccCCCCeeEEEECCCCccccCceeecceEEEcCCChHhCCCcEEEEEEeCCCce
Confidence 46678999999999999763 55789999998765432 0233444433 4889 89998877431
Q ss_pred -ceeEEeecCCCCCCCccccCCcceeEecCCcEEEEEeeeeCC-CCceEEEeCCEEecCCCCCceEEcCCCCceeEEEcC
Q psy2441 99 -PLSVYSADKIPPGFPQITEAPSTKVVEISHTTVLHCSASGNP-PPKISWIREMLPVDTSRNPRYNLLTSGAPGALQITN 176 (212)
Q Consensus 99 -~~~v~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p-~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~ 176 (212)
...+...... +|.+........+.+|+.+.|.|.+.+.| .+.+.|++++..+... ..++... + ..|.|.+
T Consensus 117 ~~~~~~~v~~~---~p~~~~~~~~~~~~~G~~v~L~C~~~g~p~~~~i~W~k~~~~l~~~-~~~~~~~-~---~~L~I~~ 188 (329)
T 3oq3_B 117 VQGIVRSHIRK---PPSCIPETYELGTHDKYGIDLYCGILYAKHYNNITWYKNNQELIID-GTKYSQS-G---QNLIIHN 188 (329)
T ss_dssp EEEEEEEEECC---CCSCEEEEEETTSSTTTCEEEECCCCSCCCCCEEEEEETTEECCCS-SSSEEEE-T---TEEEECS
T ss_pred eeEEEEEEEcC---CCcEeccccceEEeCCCcEEEEeccCCCCCCceEEEEECCccCCCC-CceEecC-C---CEEEEee
Confidence 1111111111 23333333334466799999999999999 8999999999988643 3445444 3 7999999
Q ss_pred CCCCCCeeEEEEEEcc--cccc
Q psy2441 177 SIEEDQGKYECVAENE--VGTE 196 (212)
Q Consensus 177 ~~~~d~g~y~C~a~n~--~g~~ 196 (212)
++.+|+|.|.|.|.|. .|..
T Consensus 189 v~~~D~G~Y~C~a~n~~~~g~~ 210 (329)
T 3oq3_B 189 PELEDSGRYDCYVHYDDVRIKN 210 (329)
T ss_dssp CCGGGCEEEEEEEEECCTTSSS
T ss_pred cChhhCEEEEEEEEecccCCCc
Confidence 9999999999999987 5543
No 128
>1hng_A CD2; T lymphocyte adhesion glycoprotein; 2.80A {Rattus rattus} SCOP: b.1.1.1 b.1.1.3
Probab=99.80 E-value=1.7e-19 Score=121.72 Aligned_cols=146 Identities=12% Similarity=0.092 Sum_probs=94.5
Q ss_pred ccEEeeCCeEEEEcccCC--CCCCcEEEEeCCEEecC--------CCCCeeEE--------eec--CCCCeEEEeeeCCc
Q psy2441 38 TKVVEISHTTVLHCSASG--NPPPKISWIREMLPVDT--------SRNPRYNL--------LTS--GAPGTYIKIKPNLF 97 (212)
Q Consensus 38 ~~~v~~g~~v~l~C~~~~--~p~~~v~W~k~g~~l~~--------~~~~~~~~--------~~~--~~~g~~l~i~~~~~ 97 (212)
.+.+.+|+++.|.|...+ .+.+.|.|+|++..+.. ....|+.+ ... .|.|.|.|...+..
T Consensus 5 ~v~~~~G~~v~L~c~~~~~~~~~~~i~W~k~~~~i~~~~~~~~~~~~~~r~~~~~~gsL~I~~v~~~D~G~Y~C~~~n~~ 84 (176)
T 1hng_A 5 TVWGALGHGINLNIPNFQMTDDIDEVRWERGSTLVAEFKRKMKPFLKSGAFEILANGDLKIKNLTRDDSGTYNVTVYSTN 84 (176)
T ss_dssp EEEEETTSCEEECCTTCCCCTTEEEEEEEETTEEEEEEETTSCCEESSTTEEECTTSCEEESSCCGGGCEEEEEEEEETT
T ss_pred EEEEEcCCcEEEcCCCCCcccccccEEEEeCCceeEEEcCCCeecCCCCeEEECCCCcEEEcccccccCEEEEEEEEeCC
Confidence 356789999999996533 55678999999965420 00133333 222 37888888766522
Q ss_pred cce----eEEeecCCCCCCCccccCCcceeEecCCcEEEEEeeeeCCCCceEEEeCCEEecCCCCCceEEcCCCCceeEE
Q psy2441 98 SPL----SVYSADKIPPGFPQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREMLPVDTSRNPRYNLLTSGAPGALQ 173 (212)
Q Consensus 98 ~~~----~v~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~l~ 173 (212)
... .+...+..+...|.+ ...+..+.|.|.+.+.|.|.+.|++++..+... ..+.
T Consensus 85 g~~~~~~~~~l~V~~~~~~p~i--------~~~~~~v~L~C~~~g~p~p~i~W~~~g~~l~~~-------------~~~~ 143 (176)
T 1hng_A 85 GTRILNKALDLRILEMVSKPMI--------YWECSNATLTCEVLEGTDVELKLYQGKEHLRSL-------------RQKT 143 (176)
T ss_dssp CCEEEEEEEEEEEECCCCCCEE--------EEETTTTEEEEECSSCSSCEEEEEETTEEEEEE-------------SSSE
T ss_pred CCEEEEEEEEEEEeCCCCCCEE--------EecCCcEEEEEEecCCCCcEEEEEECCEECCCC-------------CcEE
Confidence 211 111111111111221 223556999999999999999999999887653 2244
Q ss_pred EcCCCCCCCeeEEEEEEcccccceecceEEEE
Q psy2441 174 ITNSIEEDQGKYECVAENEVGTEYSPSTMLYV 205 (212)
Q Consensus 174 i~~~~~~d~g~y~C~a~n~~g~~~~~~~~l~v 205 (212)
|.++..+|.|.|.|.|.|..|..... ..|.+
T Consensus 144 i~~~~~~d~G~Y~C~a~N~~g~~~~~-~~l~~ 174 (176)
T 1hng_A 144 MSYQWTNLRAPFKCKAVNRVSQESEM-EVVNC 174 (176)
T ss_dssp EEEECSCCSSCEEEEEEETTEEEEEE-ECCCC
T ss_pred EEEEEccCCeEEEEEEEecCCCceec-ccccC
Confidence 55777999999999999999988766 55443
No 129
>3v2a_R Vascular endothelial growth factor receptor 2; IG-homology domain, vegfr-2, growth factor receptor, VEGF LI hormone-signaling protein complex, angiogenesis; 3.20A {Homo sapiens} PDB: 3v6b_R
Probab=99.80 E-value=3.7e-20 Score=150.76 Aligned_cols=182 Identities=16% Similarity=0.208 Sum_probs=58.9
Q ss_pred ceeeEEEeeccCCCcceecccccC--CCCCeEEeCCC-ccEEeeCCeEEEEcccCC--CCCCcEEEEeCCEEecCCC---
Q psy2441 3 IGTYIKIKPNLFSPLSVYSADKIP--PGFPQITEAPS-TKVVEISHTTVLHCSASG--NPPPKISWIREMLPVDTSR--- 74 (212)
Q Consensus 3 ~g~Y~C~~~~~~~~~~~~~~~~~~--~~~p~~~~~~~-~~~v~~g~~v~l~C~~~~--~p~~~v~W~k~g~~l~~~~--- 74 (212)
.|.|+|.+.+...........+.+ ..++.+.+.+. ...+.+|+.+.|.|.+.+ .+.+.+.|++++..+....
T Consensus 195 ~G~Y~C~~~~~~~~~~s~~~~~~v~~~~~~~v~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~ 274 (772)
T 3v2a_R 195 AGMVFCEAKINDESYQSIMYIVVVVGYRIYDVVLSPSHGIELSVGEKLVLNCTARTELNVGIDFNWEYPSSKHQHKKLVN 274 (772)
T ss_dssp CSEEEEEEEETTEEEECCEEEEEEECCCEEEEEEECCSCEEEETTCCEEEEEEEEECTTCCCEEEEECC--------CEE
T ss_pred CeEEEEEEEECCceEEEEEEEEEEecCccceeeeCCCCceEEecCCcEEEEEEEecCCCCceeEEEecCCccCCCceeee
Confidence 589999998754432222122222 23445555444 468999999999999976 4556899999987654310
Q ss_pred --------------CCeeEEeec--CCCCeEEEeeeCC------ccceeEEeecCCCCCCCccccC---CcceeEecCCc
Q psy2441 75 --------------NPRYNLLTS--GAPGTYIKIKPNL------FSPLSVYSADKIPPGFPQITEA---PSTKVVEISHT 129 (212)
Q Consensus 75 --------------~~~~~~~~~--~~~g~~l~i~~~~------~~~~~v~~~~~~~~~~p~~~~~---~~~~~~~~g~~ 129 (212)
...+.+... +|.|.|.|..... ...+.|.. + |.+... +....+.+|+.
T Consensus 275 ~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~~~~~~~~l~V~~----~---p~~~~~~~~~~~~~v~~G~~ 347 (772)
T 3v2a_R 275 RDLKTQSGSEMKKFLSTLTIDGVTRSDQGLYTCAASSGLMTKKNSTFVRVHE----K---PFVAFGSGMESLVEATVGER 347 (772)
T ss_dssp EEC-----CCCEEEEEEEEESSCCSTTCSEEEEEEECSSCEEEEEEEEEEEC----C---CC------------------
T ss_pred ccccccccccceEEEEEEEECcCCcCCCeEEEEEEEcCCcceeEEEEEEEeC----C---CeeEeccCCCCcEEEcCCCc
Confidence 011222222 4889999988762 22333332 1 333322 23456788999
Q ss_pred EEEEEeeeeCCCCceEEEeCCEEecCCCCCceEEcCCCCceeEEEcCCCCCCCeeEEEEEEccccccee
Q psy2441 130 TVLHCSASGNPPPKISWIREMLPVDTSRNPRYNLLTSGAPGALQITNSIEEDQGKYECVAENEVGTEYS 198 (212)
Q Consensus 130 ~~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~n~~g~~~~ 198 (212)
+.|.|.+.+.|.+.+.|++++..+... .++ ..+ ..|.|.++..+|.|.|.|.|.|..|....
T Consensus 348 v~l~C~~~~~p~~~v~W~~~g~~l~~~--~~~--~~~---~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~ 409 (772)
T 3v2a_R 348 VRIPAKYLGYPPPEIKWYKNGIPLESN--HTI--KAG---HVLTIMEVSERDTGNYTVILTNPISKEKQ 409 (772)
T ss_dssp ---------------------------------------------------------------------
T ss_pred EEEEEEEeeeCCCeEEEEECCEeCCCC--ceE--ccc---eeEEEecCChhcCceEEEEEEECCcCeEE
Confidence 999999999999999999999887653 121 122 78999999999999999999999886643
No 130
>1b6u_A KIR2DL3, P58 killer cell inhibitory receptor; natural killer cell, HLA, major histocompatibility complex class I (MHC class I); 3.00A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.80 E-value=1.8e-18 Score=123.32 Aligned_cols=173 Identities=17% Similarity=0.191 Sum_probs=111.6
Q ss_pred CCCCeEEeCCCccEEeeCCeEEEEcccCCCCCCcEEEEeCCEEecC----------CCCCeeEEeec--CCCCeEEEeee
Q psy2441 27 PGFPQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREMLPVDT----------SRNPRYNLLTS--GAPGTYIKIKP 94 (212)
Q Consensus 27 ~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~k~g~~l~~----------~~~~~~~~~~~--~~~g~~l~i~~ 94 (212)
..+|.+...|. ..+.+|++|+|.|.+.+ +.+.+.|||+|..+.. .....+.+... .|.|.|.|...
T Consensus 5 ~~kP~i~~~P~-~~V~~G~~VtL~C~~~~-~~~~~~W~k~g~~~~~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~ 82 (257)
T 1b6u_A 5 HRKPSLLAHPG-PLVKSEETVILQCWSDV-RFQHFLLHREGKFKDTLHLIGEHHDGVSKANFSIGPMMQDLAGTYRCYGS 82 (257)
T ss_dssp CCCCEECCBSC-SEEESSCCEEEEEEESS-CCSEEEEEEESTTCEEEEEECBCCTTCEEEEEEECSCCTTTCEEEEEEEE
T ss_pred CCCCEEEEcCC-CEecCCCCEEEEEecCC-CCcEEEEEECCCCCCcceeeeeccCCCceEEEEeecCCcccCEEEEEeEe
Confidence 35677776665 67899999999999974 4678999999864421 11233444433 48999999874
Q ss_pred CC---------ccceeEEeecCCCCCCCccccCCcceeEecCCcEEEEEeeeeCCCCceEEEeCCEEecCCCCCceEEcC
Q psy2441 95 NL---------FSPLSVYSADKIPPGFPQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREMLPVDTSRNPRYNLLT 165 (212)
Q Consensus 95 ~~---------~~~~~v~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~ 165 (212)
.. ...+.+..... ...|.+...+. ..+.+|+.+.|.|.+.+.+ +.+.|+|++..+... ..+.....
T Consensus 83 ~~~~~~~~s~~S~~~~L~V~~~--~~~P~l~~~p~-~~V~~G~~vtL~C~~~~~~-~~~~w~k~g~~~~~~-~~~~~~~~ 157 (257)
T 1b6u_A 83 VTHSPYQLSAPSDPLDIVITGL--YEKPSLSAQPG-PTVLAGESVTLSCSSRSSY-DMYHLSREGEAHERR-FSAGPKVN 157 (257)
T ss_dssp CSSCTTSCCCCCCCEEEEEECS--SCCCEEECSSC-TTCBTTCEEEEEEECSSCC-SEEEEEETTSSCEEC-CBCBCCSS
T ss_pred ccCCCccccccCCCEEEecccC--CCCcceEccCC-CccCCCCEEEEEEeCCCCC-cEEEEEECCcccCcc-cccccccC
Confidence 31 11222322211 12355555554 3578899999999998764 689999998766542 11111111
Q ss_pred CCCceeEEEcCCCCCCCeeEEEEEEccc----ccceecceEEEEecc
Q psy2441 166 SGAPGALQITNSIEEDQGKYECVAENEV----GTEYSPSTMLYVKGT 208 (212)
Q Consensus 166 ~~~~~~l~i~~~~~~d~g~y~C~a~n~~----g~~~~~~~~l~v~~~ 208 (212)
......|.|.+++ |+|.|.|.|.|.. ....++.+.|.|.+.
T Consensus 158 ~~~~~~l~I~~v~--D~G~Y~C~a~~~~~p~~~s~~S~pl~L~V~g~ 202 (257)
T 1b6u_A 158 GTFQADFPLGPAT--HGGTYRCFGSFRDSPYEWSNSSDPLLVSVTGN 202 (257)
T ss_dssp SCCBEEEEEEECC--SCEEEEEEEECSSCTTBBCCCCCCEEECCBCC
T ss_pred CceeEEEEecccc--cCEEEEEEEEcCCCCcccccCCCCEEEEEecc
Confidence 1113789999998 9999999999753 233344467777664
No 131
>3mj8_L Stimulatory hamster antibody HL4E10 FAB light CHA; hamster IGG, immune system; 2.94A {Cricetulus migratorius} PDB: 3mj9_L*
Probab=99.79 E-value=5.1e-19 Score=122.75 Aligned_cols=165 Identities=15% Similarity=0.255 Sum_probs=105.7
Q ss_pred CeEEeCCCccEEeeCCeEEEEcccCCCCCCcEEEEeC--CEE---ecC-------CCCCeeE-----------Eeec--C
Q psy2441 30 PQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIRE--MLP---VDT-------SRNPRYN-----------LLTS--G 84 (212)
Q Consensus 30 p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~k~--g~~---l~~-------~~~~~~~-----------~~~~--~ 84 (212)
|.+...+ ...+.+|+++.|.|.+.+.|.+.+.|||. +.. +.. ....|+. +... .
T Consensus 2 ~~v~~~~-~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~ 80 (213)
T 3mj8_L 2 YTLTQPP-LVSVALGQKATITCSGDKLSDVYVHWYQQKAGQAPVLVIYEDNRRPSGIPDHFSGSNSGNMATLTISKAQAG 80 (213)
T ss_dssp CCBBCCS-EEEEETTSCEEEEEECSSTTTSCEEEEEECTTSCCEEEEBTTTBCCTTSCTTEEEEEETTEEEEEESSCCGG
T ss_pred eeEEeCC-cEEEeCCCCEEEEEEcCCCCCceEEEEEECCCCCcEEEEEECCccCCCccCcEEEEecCCEEEEEECCCChh
Confidence 3445556 78899999999999999889999999992 211 100 0112333 2222 3
Q ss_pred CCCeEEEeeeCCc---------cceeEEeecCCCCCCCccccCCcceeEecCCcEEEEEeeeeC-CC-CceEEEeCCEEe
Q psy2441 85 APGTYIKIKPNLF---------SPLSVYSADKIPPGFPQITEAPSTKVVEISHTTVLHCSASGN-PP-PKISWIREMLPV 153 (212)
Q Consensus 85 ~~g~~l~i~~~~~---------~~~~v~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~-p~-~~i~W~~~~~~~ 153 (212)
|.|.|.|...... ..+.|... +..+|.+...+....+.+|+.+.|.|.+.+. |+ +.+.|++++..+
T Consensus 81 D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~---~~~~P~i~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l 157 (213)
T 3mj8_L 81 DEADYYCQSWDGTNSAWVFGSGTKVTVLGQ---PNAAPSVTLFPPSSEELKTNQATLVCMINGFYPADVAVTWEADGTPI 157 (213)
T ss_dssp GCEEEEEEEEETTTTEEEEBCCEEEEEECS---CCBCCEEEEECCCHHHHTTTEEEEEEEEEEEBSSCCEEEEEETTEEE
T ss_pred hCEEEEEEeccCCcceeEEcCceEEEEeCC---CCCCCeEEccCCCcccccCCcEEEEEEeeceeCCCeEEEEEcCCccc
Confidence 7888888766522 23333321 1133555555444444479999999999885 33 499999999988
Q ss_pred cCCCC-CceEEcCCCC---ceeEEEcCCCCCCCeeEEEEEEcccccceec
Q psy2441 154 DTSRN-PRYNLLTSGA---PGALQITNSIEEDQGKYECVAENEVGTEYSP 199 (212)
Q Consensus 154 ~~~~~-~~~~~~~~~~---~~~l~i~~~~~~d~g~y~C~a~n~~g~~~~~ 199 (212)
..... ..... .++. .+.|.|.++..+|.|.|+|.|.|..+.....
T Consensus 158 ~~~~~~~~~~~-~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~ 206 (213)
T 3mj8_L 158 TQGVKTTQPSK-SDSKYMATSYLTMTADAWKSRNTFICKVTHGGNTVEKS 206 (213)
T ss_dssp CTTEEECCCEE-ETTEEEEEEEEEEESHHHHSCSCEEEEEEETTEEEEEE
T ss_pred CCCcccCCcCc-cCCcEEEEEEEEEeHHHcCCCCEEEEEEEECCccEEee
Confidence 65300 00001 1110 2568999999999999999999988665433
No 132
>3mj6_A Junctional adhesion molecule-like; immunoglobulin tandem domain, cell adhesion, cell junction, glycoprotein, immunoglobulin domain, membrane; HET: NAG FUC; 2.19A {Mus musculus} PDB: 3mj7_A* 3mj9_A*
Probab=99.79 E-value=1.5e-18 Score=124.52 Aligned_cols=173 Identities=18% Similarity=0.230 Sum_probs=105.8
Q ss_pred CCeEEeCCCccEEeeCCeEEEEcccC---CCCCCcEEEEeCCEEecCC----------------CCCe------------
Q psy2441 29 FPQITEAPSTKVVEISHTTVLHCSAS---GNPPPKISWIREMLPVDTS----------------RNPR------------ 77 (212)
Q Consensus 29 ~p~~~~~~~~~~v~~g~~v~l~C~~~---~~p~~~v~W~k~g~~l~~~----------------~~~~------------ 77 (212)
.+.+...+..+.+.+|+++.|.|.+. +.+.+.|.|+|++...... ...|
T Consensus 5 ~~~v~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ 84 (268)
T 3mj6_A 5 LPGLTVSSPQLRVHVGESVLMGCVVQRTEEKHVDRVDWLFSKDKDDASEYVLFYYSNLSVPTGRFQNRSHLVGDTFHNDG 84 (268)
T ss_dssp -------CCEEEEETTCCEEECCBCCCSSCCCEEEEEEEEESSSTTCCEEEEEEETTEEEECGGGTTTEEECSCTTTTBC
T ss_pred ccccccCCCceEEecCCcEEEEEEeecCCCCceEEEEEEEeCCCCCceEEEEEEcCCCcccCccccCceEEeecCCCCEE
Confidence 34566677788999999999999997 6677789999965321100 0122
Q ss_pred -eEEeec--CCCCeEEEeeeCCcc----ceeEEeecCCCCCCCccccCCcceeEecCCcEEEEEee---eeCCCCceEEE
Q psy2441 78 -YNLLTS--GAPGTYIKIKPNLFS----PLSVYSADKIPPGFPQITEAPSTKVVEISHTTVLHCSA---SGNPPPKISWI 147 (212)
Q Consensus 78 -~~~~~~--~~~g~~l~i~~~~~~----~~~v~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~---~~~p~~~i~W~ 147 (212)
+.+... +|.|.|.|....... ...+...+ . ...+....+.+|+.+.|.|.+ .+.|.+.+.|+
T Consensus 85 ~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~l~V--~------~~~p~~~~v~~G~~v~L~C~~~~~~~~p~~~v~W~ 156 (268)
T 3mj6_A 85 SLLLQDVQKADEGIYTCEIRLKNESMVMKKPVELWV--L------PEEPRDLRVRVGDTTQMRCSIQSTEEKRVTKVNWM 156 (268)
T ss_dssp CEEECSCCGGGCEEEEEEEEETTCCCEEEEEEEEEE--E------CCCCSEEEEETTCCEEECCBCEESSSSCCCEEEEE
T ss_pred EEEECCCCHhHCEEEEEEEEecCCcceEEEEEEEEE--e------ccCCCccccccCCcEEEEEEecCCCCCCccceEEE
Confidence 223222 478888888765211 11111110 0 113345678899999999999 56788999999
Q ss_pred eCCEEe-c------------------CC-CCCceEEcCC--CCceeEEEcCCCCCCCeeEEEEEEcccccceecceEEEE
Q psy2441 148 REMLPV-D------------------TS-RNPRYNLLTS--GAPGALQITNSIEEDQGKYECVAENEVGTEYSPSTMLYV 205 (212)
Q Consensus 148 ~~~~~~-~------------------~~-~~~~~~~~~~--~~~~~l~i~~~~~~d~g~y~C~a~n~~g~~~~~~~~l~v 205 (212)
+++... . .. ...++....+ .....|.|.++..+|+|.|+|.|.|..|..... +.|.|
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~-~~l~V 235 (268)
T 3mj6_A 157 FSSGSHTEEETVLSYDSNMRSGKFQSLGRFRNRVDLTGDISRNDGSIKLQTVKESDQGIYTCSIYVGKLESRKT-IVLHV 235 (268)
T ss_dssp EECTTCSSCEEEEEEETTSSSCEEECSSTTTTTEEECSCGGGTBCCEEECSCCGGGCEEEEEEEEETTEEEEEE-EEEEE
T ss_pred ecCCCCCcceeEEEecCCCCccccccccccccceEeeccCCCCeEEEEECcCChhhCeEEEEEEEcCCceEEEE-EEEEE
Confidence 843211 0 00 0112222110 113789999999999999999999998887766 77777
Q ss_pred eccee
Q psy2441 206 KGTQV 210 (212)
Q Consensus 206 ~~~~~ 210 (212)
...+.
T Consensus 236 ~~~~p 240 (268)
T 3mj6_A 236 VQDEF 240 (268)
T ss_dssp ECC--
T ss_pred EcCCC
Confidence 54443
No 133
>2wng_A Tyrosine-protein phosphatase non-receptor type substrate 1; signal regulatory protein alpha, immunoglobulin superfamily, phosphoprotein; HET: NAG; 2.49A {Homo sapiens}
Probab=99.79 E-value=1.2e-18 Score=128.58 Aligned_cols=161 Identities=17% Similarity=0.312 Sum_probs=107.2
Q ss_pred CCeEEeCCCccEEeeCCeEEEEcccCCC-CCCcEEEEeCCEEec----C-------------------CCCCeeEEeec-
Q psy2441 29 FPQITEAPSTKVVEISHTTVLHCSASGN-PPPKISWIREMLPVD----T-------------------SRNPRYNLLTS- 83 (212)
Q Consensus 29 ~p~~~~~~~~~~v~~g~~v~l~C~~~~~-p~~~v~W~k~g~~l~----~-------------------~~~~~~~~~~~- 83 (212)
...+...|..+.+.+|+.+.|.|.+.+. |.+.|.|||++.++. . .....+.+...
T Consensus 3 ~~~v~~~p~~~~v~~G~~v~L~C~~~~~~p~~~v~W~k~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~~~~L~I~~v~ 82 (327)
T 2wng_A 3 ELQVIQPDKSVSVAAGESAILHCTVTSLIPVGPIQWFRGAGPARELIYNQKEGHFPRVTTVSESTKRENMDFSISISNIT 82 (327)
T ss_dssp CCCEECCCSEEEEETTSCEEECCEESCCCSCCCEEEEESCSTTCEEEEETTSSCCTTEEECC---CTTCCBCCEEECSCC
T ss_pred eeEEEcCCCceEEecCCcEEEEEEccCcCCCceEEEEECCCCCceEEEEcCCCCcceeeeecccccccCceeEEEEccCc
Confidence 3456677888999999999999999887 888999999874321 0 00112333332
Q ss_pred -CCCCeEEEeeeCCc-----------cceeEEeecCCCCCCCccccCCcceeEecCCcEEEEEeeeeCCCC--ceEEEeC
Q psy2441 84 -GAPGTYIKIKPNLF-----------SPLSVYSADKIPPGFPQITEAPSTKVVEISHTTVLHCSASGNPPP--KISWIRE 149 (212)
Q Consensus 84 -~~~g~~l~i~~~~~-----------~~~~v~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~--~i~W~~~ 149 (212)
+|.|.|.|...... ..+.|.. ++.+|.+. .+ ...+.+|+.+.|.|.+.+.|++ .+.|+++
T Consensus 83 ~~D~G~Y~C~a~n~~~~~~~~~~~~~~~l~V~~----~p~~p~i~-~~-~~~~~~g~~~~l~C~~~g~p~~~~~v~W~k~ 156 (327)
T 2wng_A 83 PADAGTYYCVKFRKGSPDTEFKSGAGTELSVRA----KPSAPVVS-GP-AARATPQHTVSFTCESHGFSPRDITLKWFKN 156 (327)
T ss_dssp GGGCEEEEEEEEESSTTCEEEEECCCEEEEEEB----CCCCCEEE-CC-SSCBCTTCEEEEEEEEEEEBSSCCEEEEEET
T ss_pred cccCeEEEEEeecCCCcceeEeecCcEEEEEEe----cCCCceee-cc-ccccCCCCEEEEEEEEeCccCCCcEEEEEEC
Confidence 48899999866521 2333332 23334443 22 2456789999999999988765 8999999
Q ss_pred CEEecCCCCCceEEcCCCC----ceeEEEcCCCCCCCeeEEEEEEcccccc
Q psy2441 150 MLPVDTSRNPRYNLLTSGA----PGALQITNSIEEDQGKYECVAENEVGTE 196 (212)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~----~~~l~i~~~~~~d~g~y~C~a~n~~g~~ 196 (212)
+..+.... ..+.....++ .+.|.|.....+|.|.|.|.|.|..+..
T Consensus 157 g~~l~~~~-~~~~~~~~~~~~~~~s~L~i~~~~~d~~g~Y~C~a~n~~~~~ 206 (327)
T 2wng_A 157 GNELSDFQ-TNVDPVGESVSYSIHSTAKVVLTREDVHSQVICEVAHVTLQG 206 (327)
T ss_dssp TEECCCEE-EEEECSSCCSCEEEEEEEEEECCTTGGGCEEEEEEECTTSCS
T ss_pred CEEccccc-cccccccCCCceEEEEEEEEechhcCcCceEEEEEeccccCC
Confidence 98886531 1111111111 2467777777777899999999987763
No 134
>2pet_A Lutheran blood group glycoprotein; immunoglobulin superfamily., cell adhesion; 1.70A {Homo sapiens} PDB: 2pf6_A
Probab=99.79 E-value=9.4e-19 Score=122.75 Aligned_cols=158 Identities=17% Similarity=0.311 Sum_probs=102.9
Q ss_pred CCCccEEeeCCeEEEEcccCCCCC-CcEEEEeCCEEec-----------------------------CCCCCeeEEeec-
Q psy2441 35 APSTKVVEISHTTVLHCSASGNPP-PKISWIREMLPVD-----------------------------TSRNPRYNLLTS- 83 (212)
Q Consensus 35 ~~~~~~v~~g~~v~l~C~~~~~p~-~~v~W~k~g~~l~-----------------------------~~~~~~~~~~~~- 83 (212)
.|....+.+|+.+.|.|.+.+.+. +.+.|+|++.... ......+.+...
T Consensus 6 ~p~~~~v~~G~~v~L~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~L~i~~v~ 85 (231)
T 2pet_A 6 VPPLVEVMRGKSVILDCTPTGTHDHYMLEWFLTDRSGARPRLASAEMQGSELQVTMHDTRGRSPPYQLDSQGRLVLAEAQ 85 (231)
T ss_dssp CCSEEEEETTCCEEECCCCBSCCSEEEEEEEEECTTCCCCEEEEEEEETTEEEEEECCCSCCSSCCEECTTCCEEESSCC
T ss_pred CCCcEEEEcCCCEEEecccCCCCCceEEEEEEeCCCceeEEEEeccccCCccccccccccccccccccCCCceEEEcccC
Confidence 456778999999999999998885 8899997543211 010122333333
Q ss_pred -CCCCeEEEeeeCCc---cceeEEeecCCCCCCCccccCCcceeEecCCcE-EEEEee-eeCCCCceEEEeCCEEecCCC
Q psy2441 84 -GAPGTYIKIKPNLF---SPLSVYSADKIPPGFPQITEAPSTKVVEISHTT-VLHCSA-SGNPPPKISWIREMLPVDTSR 157 (212)
Q Consensus 84 -~~~g~~l~i~~~~~---~~~~v~~~~~~~~~~p~~~~~~~~~~~~~g~~~-~l~C~~-~~~p~~~i~W~~~~~~~~~~~ 157 (212)
+|.|.|.|...... ....+...+..++..|.+...+....+.+|+.+ .|.|.+ .+.|.|.+.|++++..+....
T Consensus 86 ~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~~~~g~~~~~l~C~~~~~~p~p~i~W~~~~~~~~~~~ 165 (231)
T 2pet_A 86 VGDERDYVCVVRAGAAGTAEATARLNVFAKPEATEVSPNKGTLSVMEDSAQEIATCNSRNGNPAPKITWYRNGQRLEVPV 165 (231)
T ss_dssp GGGCEEEEEEEECGGGCEEEEEEEEEEEBCCCCCEEEECCSSCCTTCCSEEEEEEEEEEEEBSCCEEEEEETTEECCCCS
T ss_pred cccCceEEEEEEecCCCceEEEEEEEEEecCCCcEEecCCcceeecCCCceEEEEEEeECcccCCEEEEEECCccCcccc
Confidence 48889999866522 111222222223334555555555666788888 999999 899999999999999887652
Q ss_pred --CCceEEcCC-----CC----ceeEEEcCCCCCCCeeEEEEEEcc
Q psy2441 158 --NPRYNLLTS-----GA----PGALQITNSIEEDQGKYECVAENE 192 (212)
Q Consensus 158 --~~~~~~~~~-----~~----~~~l~i~~~~~~d~g~y~C~a~n~ 192 (212)
..++..... .+ .+.|.|.....+|.|.|+|.|.|.
T Consensus 166 ~~~~~~~~~~~~~~~~~g~~~~~~~L~i~~~~~dd~g~Y~C~a~n~ 211 (231)
T 2pet_A 166 EMNPEGYMTSRTVREASGLLSLTSTLYLRLRKDDRDASFHCAAHYS 211 (231)
T ss_dssp SCCSSEEEEEEEEECTTSCEEEEEEEEEECCGGGGGCEEEEEEEEE
T ss_pred ccccceeecceeEecCCCeEEEEEEEEEecchhhCCceEEEEEEcC
Confidence 123322211 11 256888755556699999999994
No 135
>2wqr_A IG epsilon chain C region; immune system, immunoglobulin domain, glycoprotein; HET: NAG BMA MAN PG4; 1.90A {Homo sapiens} PDB: 2y7q_B* 1o0v_A* 3h9y_A* 3h9z_A* 3ha0_A* 1fp5_A 1f6a_B 1g84_A
Probab=99.79 E-value=4.6e-19 Score=130.64 Aligned_cols=192 Identities=17% Similarity=0.196 Sum_probs=115.0
Q ss_pred ceeeEEEeeccCCCcceeccc--ccCCCCCeE-EeCCCccEEeeCCeEEEEcccCCC-CCC---cEEEEeCC-EEecCC-
Q psy2441 3 IGTYIKIKPNLFSPLSVYSAD--KIPPGFPQI-TEAPSTKVVEISHTTVLHCSASGN-PPP---KISWIREM-LPVDTS- 73 (212)
Q Consensus 3 ~g~Y~C~~~~~~~~~~~~~~~--~~~~~~p~~-~~~~~~~~v~~g~~v~l~C~~~~~-p~~---~v~W~k~g-~~l~~~- 73 (212)
.|.|+|++.|..+........ .....+|.+ ...|....+.+|+.+.|.|.+.+. |.+ .|.|||++ ..+...
T Consensus 84 ~g~Y~C~a~n~~~~~~~~~~~~~~~~~~~p~v~~~~p~~~~v~~G~~v~L~C~~~g~~P~p~~~~i~W~k~~g~~~~~~~ 163 (323)
T 2wqr_A 84 DRTYTCQVTYQGHTFEDSTKKCADSNPRGVSAYLSRPSPFDLFIRKSPTITCLVVDLAPSKGTVQLTWSRASGKPVNHST 163 (323)
T ss_dssp TCCEEEEEEETTEEEEEEECCCCCSSGGGCEEEECCCCHHHHHTSSCCEEEEEEEEECCCSSCCEEEEEETTCCCCCCCC
T ss_pred CCcEEEEEEeCCCCcceeeecCCCCCCCCCEEEEcCCCHHHhccCCeEEEEEEEeccCCCCCceEEEEEECCCccccccc
Confidence 489999999977654322111 111234444 355666678899999999999875 555 89999974 444321
Q ss_pred ------CCCe------eEEeec--CCCCeEEEeeeCCcc----ceeEEeecCCCCCCCccccCCcceeEecCCcEEEEEe
Q psy2441 74 ------RNPR------YNLLTS--GAPGTYIKIKPNLFS----PLSVYSADKIPPGFPQITEAPSTKVVEISHTTVLHCS 135 (212)
Q Consensus 74 ------~~~~------~~~~~~--~~~g~~l~i~~~~~~----~~~v~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~ 135 (212)
...+ +.+... +|.|.|.|....... .+.+.... ....+|.+...+.......|+.+.|.|.
T Consensus 164 ~~~~~~~~g~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~~~~~~~~~v~~~~-~~~~~P~v~~~~~~~~~~~g~~~~l~C~ 242 (323)
T 2wqr_A 164 RKEEKQRNGTLTVTSTLPVGTRDWIEGETYQCRVTHPHLPRALMRSTTKTS-GPRAAPEVYAFATPEWPGSRDKRTLACL 242 (323)
T ss_dssp CEEEECTTSCEEEEEEEECCHHHHHTTCCEEEEEECTTSSSCEEEEECCCC-SCCBCCEEEEEECCCCTTCTTEEEEEEE
T ss_pred CCCccCCCCCEEEEEEEEECHHHccCCCCEEEEEECCCCCCCeeeEEEccC-CCCCCCEEEEeCCChHHhcCCcEEEEEE
Confidence 0112 222211 378899998876321 22222110 0112354443222211123999999999
Q ss_pred eee-CCCC-ceEEEeCCEEecCCCC--CceEEcCCCC---ceeEEEcCCCCCCCeeEEEEEEccccc
Q psy2441 136 ASG-NPPP-KISWIREMLPVDTSRN--PRYNLLTSGA---PGALQITNSIEEDQGKYECVAENEVGT 195 (212)
Q Consensus 136 ~~~-~p~~-~i~W~~~~~~~~~~~~--~~~~~~~~~~---~~~l~i~~~~~~d~g~y~C~a~n~~g~ 195 (212)
+.+ .|.+ .+.|++++..+..... .......++. .+.|.|.++..+|.|.|+|.|.|..+.
T Consensus 243 ~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~ 309 (323)
T 2wqr_A 243 IQNFMPEDISVQWLHNEVQLPDARHSTTQPRKTKGSGFFVFSRLEVTRAEWEQKDEFICRAVHEAAS 309 (323)
T ss_dssp EEEEBSSCCEEEEEETTEECCGGGEEECCCEECSSSSEEEEEEEEEEHHHHHHCCCEEEEEECTTST
T ss_pred eeeeeCCCcEEEEEECCEECCCCceeecCcccCCCCcEEEEEEEEEChHHccCCCEEEEEEEeCCCC
Confidence 988 4543 8999999998764200 0000111111 257899999999999999999998766
No 136
>4dep_C Interleukin-1 receptor accessory protein; B-trefoil, immunoglobulin, immune system, extracellular; HET: NAG; 3.10A {Homo sapiens} PDB: 3o4o_B*
Probab=99.79 E-value=8.5e-18 Score=124.99 Aligned_cols=162 Identities=16% Similarity=0.237 Sum_probs=108.8
Q ss_pred CCccEEeeCCeEEEEcccCCCCC-----------CcEEEEeCCE------Eec---CC-----CCCeeEEeec--CCCCe
Q psy2441 36 PSTKVVEISHTTVLHCSASGNPP-----------PKISWIREML------PVD---TS-----RNPRYNLLTS--GAPGT 88 (212)
Q Consensus 36 ~~~~~v~~g~~v~l~C~~~~~p~-----------~~v~W~k~g~------~l~---~~-----~~~~~~~~~~--~~~g~ 88 (212)
..++.+.+|+.+.|.|.+.+.|. +.|.|+|++. ++. .. ....+.+... +|.|.
T Consensus 14 ~~~v~v~~G~~v~L~C~~~~~p~~~~ys~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~ 93 (349)
T 4dep_C 14 MRQIQVFEDEPARIKCPLFEHFLKFNYSTAHSAGLTLIWYWTRQDRDLEEPINFRLPENRISKEKDVLWFRPTLLNDTGN 93 (349)
T ss_dssp CCCCEEETTSCEEEECTCCCCCSSSCHHHHHHTTCEEEEEEEESSCCCEEECCCCCGGGCEEEETTEEEESSCCGGGCEE
T ss_pred eeeEEEecCCeEEEEccccccccccccccccCCCceEEEEECCCCCcccccccccccCceEeecCCEEEEccCChhhCEE
Confidence 46778999999999999987664 8999999883 221 00 0123333332 48999
Q ss_pred EEEeeeCCcc------ceeEEeecCCCCCCCccccCCcceeEecCCcEEEEEee-----eeCCCCceEEEeCCEEecCCC
Q psy2441 89 YIKIKPNLFS------PLSVYSADKIPPGFPQITEAPSTKVVEISHTTVLHCSA-----SGNPPPKISWIREMLPVDTSR 157 (212)
Q Consensus 89 ~l~i~~~~~~------~~~v~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~-----~~~p~~~i~W~~~~~~~~~~~ 157 (212)
|.|...+... .+.|... +...+.....+....+.+|+.+.|.|.+ .+.|.+.+.|++++..+...
T Consensus 94 Y~C~a~n~~~~~~~~~~l~V~~~---~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~g~p~~~v~W~k~~~~l~~~- 169 (349)
T 4dep_C 94 YTCMLRNTTYCSKVAFPLEVVQK---DSCFNSPMKLPVHKLYIEYGIQRITCPNVDGYFPSSVKPTITWYMGCYKIQNF- 169 (349)
T ss_dssp EEEEEECSSCEEEEEEEEEEECC---CTTSCCSCCCCEEEEETTCSEEEEECCSCTTSSCTTSCCEEEEEETTEECCSC-
T ss_pred EEEEEecCCceEEEEEEEEEecC---CcccCcccccCcceeeecCccEEEEcCCCcccccCCCCceEEEeeCCEECCCc-
Confidence 9998877322 2333321 1111111222344567889999999985 77899999999999987542
Q ss_pred CCceEEcCCCCceeEEEcCCCCCCCeeEEEEEEccc-ccc---eecceEEEEec
Q psy2441 158 NPRYNLLTSGAPGALQITNSIEEDQGKYECVAENEV-GTE---YSPSTMLYVKG 207 (212)
Q Consensus 158 ~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~n~~-g~~---~~~~~~l~v~~ 207 (212)
.++. .++ ..|.|.++..+|+|.|+|.|.|.. |.. ... +.|.|..
T Consensus 170 -~~~~--~~~--~~L~i~~v~~~d~G~Y~C~a~n~~~g~~~~~~~~-~~l~v~~ 217 (349)
T 4dep_C 170 -NNVI--PEG--MNLSFLIALISNNGNYTCVVTYPENGRTFHLTRT-LTVKVVG 217 (349)
T ss_dssp -SSEE--EET--TEEEEESCCGGGCEEEEEEEEEEETTEEEEEEEE-EEEEEEC
T ss_pred -ccee--ecC--CEEEEeeeeecCCcEEEEEEEEeeCCEEEEEEEE-EEEEEEc
Confidence 2322 222 589999999999999999999987 544 223 5555544
No 137
>1itb_B Type 1 interleukin-1 receptor; immunoglobulin fold, transmembrane, glycoprotein, signal, complex (immunoglobulin/receptor); 2.50A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ira_Y* 4dep_B* 1g0y_R
Probab=99.79 E-value=1.7e-18 Score=127.03 Aligned_cols=157 Identities=19% Similarity=0.326 Sum_probs=108.4
Q ss_pred CCccEEeeCCeEEEEcccCCCC-CCcEEEEeCCEEecC--CCCCe-------eEEeec--CCCCeEEEeeeCCccceeEE
Q psy2441 36 PSTKVVEISHTTVLHCSASGNP-PPKISWIREMLPVDT--SRNPR-------YNLLTS--GAPGTYIKIKPNLFSPLSVY 103 (212)
Q Consensus 36 ~~~~~v~~g~~v~l~C~~~~~p-~~~v~W~k~g~~l~~--~~~~~-------~~~~~~--~~~g~~l~i~~~~~~~~~v~ 103 (212)
...+.+.+|+.+.|.|.+.+.| .+.|.|+|+|..+.. ....+ +.+... +|.|.|.|..........+.
T Consensus 12 ~~~~~v~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~ 91 (315)
T 1itb_B 12 KIILVSSANEIDVRPCPLNPNEHKGTITWYKDDSKTPVSTEQASRIHQHKEKLWFVPAKVEDSGHYYCVVRNSSYCLRIK 91 (315)
T ss_dssp CCCCEEETTSCCCCBCCCCSCCCSSCCCEECTTSCSCSCCCTTSSSEECSSBEECTTCCGGGCSCCEECCCSSSCCCCEE
T ss_pred ceEEEEcCCCcEEEEeeccCcCCCceEEEEeCCCcCccccccCCcEeccCCeEEECCCChhhCEEEEEEEeCCceEEEEE
Confidence 3467889999999999998877 789999999864321 11122 222222 48889999887744333332
Q ss_pred eecCCCCCCCccccCC---cceeEecCCcEEEEEee------eeCCCCceEEEeCCEEecCCCCCceEEcCCCCceeEEE
Q psy2441 104 SADKIPPGFPQITEAP---STKVVEISHTTVLHCSA------SGNPPPKISWIREMLPVDTSRNPRYNLLTSGAPGALQI 174 (212)
Q Consensus 104 ~~~~~~~~~p~~~~~~---~~~~~~~g~~~~l~C~~------~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i 174 (212)
....+...+|.+...+ ....+..|+.+.|.|.+ .+.|.+.+.|++++..+... ..++.. .+ ..|.|
T Consensus 92 ~~v~v~~~~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~g~p~~~i~W~k~~~~l~~~-~~~~~~-~~---~~L~i 166 (315)
T 1itb_B 92 ISAKFVENEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPLLLD-NIHFSG-VK---DRLIV 166 (315)
T ss_dssp CCCEEECCCTTSSSCGGGEEEEEEETTSCEEEECSSCTTTCTTTTCCCCCEEEETTEECCCC-SSSEEE-ET---TEEEE
T ss_pred EEEEEeCCCCCcccccccccceEEecCCCeEEEEecccccccCCCCCCEEEEEECCEECCCc-cceEee-cC---ceEEE
Confidence 2211111224333222 22567889999999998 88999999999999988654 233322 23 68999
Q ss_pred cCCCCCCCeeEEEEEE-cccccce
Q psy2441 175 TNSIEEDQGKYECVAE-NEVGTEY 197 (212)
Q Consensus 175 ~~~~~~d~g~y~C~a~-n~~g~~~ 197 (212)
.++..+|+|.|.|.|. |..|...
T Consensus 167 ~~v~~~d~G~Y~C~a~~n~~g~~~ 190 (315)
T 1itb_B 167 MNVAEKHRGNYTCHASYTYLGKQY 190 (315)
T ss_dssp SSCCGGGCEEEEEEEEEEETTEEE
T ss_pred EeceehhCcEEEEEEEcCCCCcEE
Confidence 9999999999999999 7888764
No 138
>1lk3_L 9D7 light chain; antigen-antibody complex, immune system; 1.91A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 1fn4_A 1c5d_L 1bfo_A 3b9k_L*
Probab=99.78 E-value=7.1e-18 Score=116.77 Aligned_cols=160 Identities=13% Similarity=0.203 Sum_probs=101.4
Q ss_pred EEeCCCccEEeeCCeEEEEcccCCCCCCcEEEEeC--CEEe----------cCCCCCeeEEe-----------ec--CCC
Q psy2441 32 ITEAPSTKVVEISHTTVLHCSASGNPPPKISWIRE--MLPV----------DTSRNPRYNLL-----------TS--GAP 86 (212)
Q Consensus 32 ~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~k~--g~~l----------~~~~~~~~~~~-----------~~--~~~ 86 (212)
+.. |....+.+|+++.|.|.+.+.|.+.|.|||+ |..+ ......|+.+. .. .|.
T Consensus 4 v~q-p~~~~v~~G~~v~L~C~~~~~~~~~v~W~~~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~ 82 (210)
T 1lk3_L 4 LTQ-PPALTVSPGEKLTISCKASESVTSRMHWYQQKPGQQPKLLIYKASNLASGVPARFSGSGSGTDFTLTIDPVEADDT 82 (210)
T ss_dssp EEC-CSEEEECTTSCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGC
T ss_pred EEC-CCcEEEcCCCCEEEEeeCCCccCCCEEEEEECCCCCeEEEEEccccccCCccccEEEEecCCEEEEEECCCCHHHC
Confidence 445 7788899999999999999988889999994 2221 11112333332 11 378
Q ss_pred CeEEEeeeCCcc-------ceeEEeecCCCCCCCccccCCcceeEecCCcEEEEEeeee-CCCC-ceEEEeCCEEecCC-
Q psy2441 87 GTYIKIKPNLFS-------PLSVYSADKIPPGFPQITEAPSTKVVEISHTTVLHCSASG-NPPP-KISWIREMLPVDTS- 156 (212)
Q Consensus 87 g~~l~i~~~~~~-------~~~v~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~-~p~~-~i~W~~~~~~~~~~- 156 (212)
|.|.|....... .+.|.. ...+|.+...+....+..|+.+.|.|.+.+ .|.+ .+.|++++..+...
T Consensus 83 G~Y~C~~~~~~~~~~~~~~~l~V~~----~~~~P~v~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~~~~~~ 158 (210)
T 1lk3_L 83 AIYFCQQSWNGPLTFGAGTKLELKR----ADAAPTVSIFPPSTEQLATGGASVVCLMNNFYPRDISVKWKIDGTERRDGV 158 (210)
T ss_dssp EEEEEEECSSSSCEECCCEEEEECC----CCBCCEEEEECCCHHHHTTTEEEEEEEEEEEBSSCCEEEEEETTEECCTTE
T ss_pred eEEEEEEEcCCCceeCCCEEEEEcC----CCcCCeEEEECCchhhccCCcEEEEEEEEeEeCCceEEEEEeCCccCCCCc
Confidence 888888766221 223321 112355554333322346999999999987 4554 89999999887542
Q ss_pred CC-CceEEcCCCC---ceeEEEcCCCCCCCeeEEEEEEcccccc
Q psy2441 157 RN-PRYNLLTSGA---PGALQITNSIEEDQGKYECVAENEVGTE 196 (212)
Q Consensus 157 ~~-~~~~~~~~~~---~~~l~i~~~~~~d~g~y~C~a~n~~g~~ 196 (212)
.. .......++. .+.|.|.++..+|.|.|+|.|.|.....
T Consensus 159 ~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~ 202 (210)
T 1lk3_L 159 LDSVTDQDSKDSTYSMSSTLSLTKADYESHNLYTCEVVHKTSSS 202 (210)
T ss_dssp EEEECCCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEECTTCSS
T ss_pred eEccCCccCCCCCEEEEEEEEEChHHhccCCcEEEEEEecCCCC
Confidence 00 0010111111 2479999999999999999999976543
No 139
>3uzq_A Anti-dengue MAB 4E11; dengue antibody neutralization, immune system; HET: MES; 1.60A {Mus musculus} PDB: 3uze_A* 3uyp_A* 3uzv_B 1dzb_A
Probab=99.78 E-value=3e-18 Score=122.03 Aligned_cols=177 Identities=20% Similarity=0.273 Sum_probs=111.8
Q ss_pred EeCCCccEEeeCCeEEEEcccCCCC--CCcEEEEeC--CEE---e------------cCCCCCeeEEe------------
Q psy2441 33 TEAPSTKVVEISHTTVLHCSASGNP--PPKISWIRE--MLP---V------------DTSRNPRYNLL------------ 81 (212)
Q Consensus 33 ~~~~~~~~v~~g~~v~l~C~~~~~p--~~~v~W~k~--g~~---l------------~~~~~~~~~~~------------ 81 (212)
...+....+.+|++++|.|.+.+.+ .+.+.|||. +.. + ......|+.+.
T Consensus 5 ~~~p~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I 84 (253)
T 3uzq_A 5 LEQSGAELVKPGASVRLSCTASGFNIKDTYMSWVKQRPEQGLEWIGRIDPANGDTKYDPKFQGKATITADTSSNTAYLHL 84 (253)
T ss_dssp EEECCCEEECTTCCEEEEEEECSSCGGGSCEEEEEECTTCCEEEEEEEETTTTEEEECGGGTTTEEEEEETTTTEEEEEE
T ss_pred EecCCCeeecCCCcEEEEEEeeCCcccCceEEEEEeCCCCCCEEEEEEccCCCcceeCCcCCCcEEEEeecCCCeEEEEe
Confidence 4556778899999999999998754 678999992 111 1 00001233322
Q ss_pred -ec--CCCCeEEEeeeCC-------ccceeEEeec--------CCCCCCCccccCCcceeEecCCcEEEEEeeeeCCCC-
Q psy2441 82 -TS--GAPGTYIKIKPNL-------FSPLSVYSAD--------KIPPGFPQITEAPSTKVVEISHTTVLHCSASGNPPP- 142 (212)
Q Consensus 82 -~~--~~~g~~l~i~~~~-------~~~~~v~~~~--------~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~- 142 (212)
.. +|.|.|.|..... ...+.|.... .....++.+...+....+.+|+++.|.|.+.+.+.+
T Consensus 85 ~~v~~~DsG~Y~C~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~ 164 (253)
T 3uzq_A 85 SSLTSGDTAVYYCSRGWEGFAYWGQGTLVTVSAGGGGSGGGGSGGGGSELVMTQTPASLAVSLGQRATISCRASENVDRY 164 (253)
T ss_dssp CSCCGGGCEEEEEEECSSSCCEECCCEEEEECSSSCCCCC---------CCEEEECSEEEECTTSCEEEEEEESSCCEET
T ss_pred CCCCcccCEEEEEEEeeCCccEECCCcEEEEecCCccccccccCCCcccceEECcCCeEEEeCCCCEEEEEEecCccccC
Confidence 22 3788888877651 2223332100 001113555556666788999999999999998876
Q ss_pred ---ceEEEeCC--EEec----------CCCCCceEEcCCCCceeEEEcCCCCCCCeeEEEEEEcccccceecceEEEEec
Q psy2441 143 ---KISWIREM--LPVD----------TSRNPRYNLLTSGAPGALQITNSIEEDQGKYECVAENEVGTEYSPSTMLYVKG 207 (212)
Q Consensus 143 ---~i~W~~~~--~~~~----------~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~n~~g~~~~~~~~l~v~~ 207 (212)
.+.|+++. .... .....++.........+|.|.++..+|+|.|.|.|.|..+........|.|..
T Consensus 165 ~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~n~~~~~fg~gt~l~v~~ 244 (253)
T 3uzq_A 165 GNSFMHWYQQKAGQPPKLLIYRASNLESGIPARFSGSGSRTDFTLTINPVEADDVATYFCQRSNEVPWTFGGGTKLEIKR 244 (253)
T ss_dssp TEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSSCCBCCCEEEEECC
T ss_pred CCcEEEEEEECCCCCCEEEEEEccccCCccCCceEEeCCCCEEEEEECCCCHHHCEEEEEEEccCCCcEECCCEEEEEcC
Confidence 99999842 2111 00123444333333468999999999999999999997665555557888876
Q ss_pred ce
Q psy2441 208 TQ 209 (212)
Q Consensus 208 ~~ 209 (212)
..
T Consensus 245 ~~ 246 (253)
T 3uzq_A 245 PL 246 (253)
T ss_dssp C-
T ss_pred CC
Confidence 53
No 140
>1nqb_A Single-chain antibody fragment; multivalent antibody, diabody, domain SWA immunoglobulin; 2.00A {Mus musculus} SCOP: b.1.1.1 b.1.1.1 PDB: 1lmk_A 1qnz_H
Probab=99.78 E-value=1e-17 Score=119.54 Aligned_cols=171 Identities=17% Similarity=0.250 Sum_probs=108.2
Q ss_pred CCCccEEeeCCeEEEEcccCCCC--CCcEEEEeC--CEEe---cC------------CCCCeeEEee-------------
Q psy2441 35 APSTKVVEISHTTVLHCSASGNP--PPKISWIRE--MLPV---DT------------SRNPRYNLLT------------- 82 (212)
Q Consensus 35 ~~~~~~v~~g~~v~l~C~~~~~p--~~~v~W~k~--g~~l---~~------------~~~~~~~~~~------------- 82 (212)
.|....+.+|++++|.|.+.+.| .+.+.|||+ +..+ .. ....|+.+..
T Consensus 6 ~p~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~ 85 (256)
T 1nqb_A 6 QSGAELVKPGASVKLSCKASGYTFTSYWMHWVKQRPGRGLEWIGRIDPNSGGTKYNEKFKSKATLTVDKPSSTAYMQLSS 85 (256)
T ss_dssp ECCCEEECTTCCEEEEEEECSSCGGGSCEEEEEEETTTEEEEEEEECTTTCCEEECGGGTTTEEEEEETTTTEEEEEECS
T ss_pred CCCCeeecCCCcEEEEEEeccccCCCceEEEEEECCCCCcEEEEEEecCCCceeeCcccCCeEEEEEecCCCEEEEEECc
Confidence 45567899999999999998875 578999994 2211 00 0123444332
Q ss_pred c--CCCCeEEEeeeCCcc----c---eeEEeecCCCCCCCccccCCcceeEecCCcEEEEEeeeeCCCC-----ceEEEe
Q psy2441 83 S--GAPGTYIKIKPNLFS----P---LSVYSADKIPPGFPQITEAPSTKVVEISHTTVLHCSASGNPPP-----KISWIR 148 (212)
Q Consensus 83 ~--~~~g~~l~i~~~~~~----~---~~v~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~-----~i~W~~ 148 (212)
. .|.|.|.|....... . ..+...+. ..|.+...+....+.+|+.+.|.|.+.+.|.+ .+.|++
T Consensus 86 v~~~DsG~Y~C~~~n~~g~~~~~~~~~~~~L~V~---~~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k 162 (256)
T 1nqb_A 86 LTSEDSAVYYCARYDYYGSSYFDYWGQGTTVTVS---SDIELTQTPLSLPVSLGDQASISCRSSQSIVHSNGNTYLEWYL 162 (256)
T ss_dssp CCGGGCEEEEEEECCTTSSSSCSEECCCEEEEEC---CCCCEEEECSEEEECTTCCEEEEEEESSCCBCTTSCBCEEEEE
T ss_pred CChhhCEEEEEEEeeccCccceeEEcCceeeeec---ccccEEecCcEEEEecCCcEEEEeEecCcccccccceEEEEEE
Confidence 1 377788887665311 0 00111111 12444455666778999999999999988765 999999
Q ss_pred --CCEEecC----------CCCCceEEcCCCCceeEEEcCCCCCCCeeEEEEEEcccccceecceEEEEecc
Q psy2441 149 --EMLPVDT----------SRNPRYNLLTSGAPGALQITNSIEEDQGKYECVAENEVGTEYSPSTMLYVKGT 208 (212)
Q Consensus 149 --~~~~~~~----------~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~n~~g~~~~~~~~l~v~~~ 208 (212)
++..+.. ....++.........+|.|.++..+|+|.|.|.|.|..+........|.|...
T Consensus 163 ~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~~~~~~~fg~gt~l~V~~~ 234 (256)
T 1nqb_A 163 QKPGQSPKLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISRVEAEDLGVYYCFQGSHVPYTFGGGTKLEIKRA 234 (256)
T ss_dssp ECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSSCEECCCEEEEECC-
T ss_pred ECCCCCcEEEEEEeCCCCCccCCcEEEEccCCEEEEEECCCChHHCEEEEEEEccCCceEECCCEEEEEECC
Confidence 5543310 01234444333334689999999999999999999865444333367777643
No 141
>1igt_B IGG2A intact antibody - MAB231; intact immunoglobulin V region C region, immunoglobulin; HET: NAG FUL BMA MAN GAL FUC; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=99.78 E-value=1.1e-18 Score=133.88 Aligned_cols=188 Identities=16% Similarity=0.181 Sum_probs=113.3
Q ss_pred eeeEEEeeccCCCcceecccc-----------------cCCCCCeE-EeCCCccE-EeeCCeEEEEcccCCCC----CCc
Q psy2441 4 GTYIKIKPNLFSPLSVYSADK-----------------IPPGFPQI-TEAPSTKV-VEISHTTVLHCSASGNP----PPK 60 (212)
Q Consensus 4 g~Y~C~~~~~~~~~~~~~~~~-----------------~~~~~p~~-~~~~~~~~-v~~g~~v~l~C~~~~~p----~~~ 60 (212)
|.|+|.+.|..+......... ....+|.+ ...|.... +.+|+++.|.|.+.+.+ .+.
T Consensus 196 g~Y~C~a~n~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~v~~~~p~~~~~~~~G~~~~L~C~~~g~~~~p~~~~ 275 (444)
T 1igt_B 196 QSITCNVAHPASSTKVDKKIEPRGPTIKPCPPCKCPAPNLLGGPSVFIFPPKIKDVLMISLSPIVTCVVVDVSEDDPDVQ 275 (444)
T ss_dssp SCCEEEEEETTTTEEEEEECCCCCCSCCCCCCCSCCCSCCCCCCEEEEECCCHHHHHCTTSCCEEEEEEEEECTTCCCCE
T ss_pred CeEEEEEEeCCCCcceEEEeccCCCCcccCCccccCCcccCCCceEEecCCchhheeecCCCcEEEEEEeecccCCCCeE
Confidence 789999999888643222211 11236776 34444333 58899999999998873 358
Q ss_pred EEEEeCCEEecCCCCC--------------eeEEeec--CCCCeEEEeeeCCccc----eeEEeecCCCCCCCccccCCc
Q psy2441 61 ISWIREMLPVDTSRNP--------------RYNLLTS--GAPGTYIKIKPNLFSP----LSVYSADKIPPGFPQITEAPS 120 (212)
Q Consensus 61 v~W~k~g~~l~~~~~~--------------~~~~~~~--~~~g~~l~i~~~~~~~----~~v~~~~~~~~~~p~~~~~~~ 120 (212)
|.|+|+|..+...... .+.+... +|.|.|.|.+.+.... ..+.. ......+|.+...+.
T Consensus 276 v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~n~~~~~~~~~~v~~-~~~~~~~P~v~~~~~ 354 (444)
T 1igt_B 276 ISWFVNNVEVHTAQTQTHREDYNSTLRVVSALPIQHQDWMSGKEFKCKVNNKDLPAPIERTISK-PKGSVRAPQVYVLPP 354 (444)
T ss_dssp EEEEETTEECSSTTCBCCEEECSSSEEEEEEEECCHHHHHTTCEEEEEEECTTCSSCEEEEEEC-CCCCCBCCEEEEECC
T ss_pred EEEEECCccccCcccccceeCCCCcEEEEEEEEEcHHHhccCCcEEEEEEcCCCCCceEEEEec-cCCCCCCCEEEEeCC
Confidence 9999999887543111 1112111 3889999988873322 12211 011222355543332
Q ss_pred c-eeEecCCcEEEEEeeee-CCCC-ceEEEeCCEEecCCCCCceEEcCCCC---ceeEEEcCCCCCCCeeEEEEEEccc
Q psy2441 121 T-KVVEISHTTVLHCSASG-NPPP-KISWIREMLPVDTSRNPRYNLLTSGA---PGALQITNSIEEDQGKYECVAENEV 193 (212)
Q Consensus 121 ~-~~~~~g~~~~l~C~~~~-~p~~-~i~W~~~~~~~~~~~~~~~~~~~~~~---~~~l~i~~~~~~d~g~y~C~a~n~~ 193 (212)
. ..+. ++.+.|.|.+.+ .|.+ .+.|++++..+............++. .+.|.+.....+|.|.|+|.|.|..
T Consensus 355 ~~~~~~-~~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~g~YtC~a~n~~ 432 (444)
T 1igt_B 355 PEEEMT-KKQVTLTCMVTDFMPEDIYVEWTNNGKTELNYKNTEPVLDSDGSYFMYSKLRVEKKNWVERNSYSCSVVHEG 432 (444)
T ss_dssp CGGGTT-SSEEEEEEEEEEEBSSCCEEEEEETTEECSSEEECCCEECTTSCEEEEEEEEEEHHHHHTCCCEEEEEECTT
T ss_pred ChHHcc-CCeEEEEEEEEeeeCCCCEEEEEECCEEccccccccceeCCCCCEEEEEEEEEChHHhcCCCeEEEEEECCC
Confidence 2 2233 445999999998 5665 89999999887432111111122221 2356666666778999999999975
No 142
>2y23_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin- like; 2.50A {Homo sapiens}
Probab=99.78 E-value=4.6e-17 Score=119.04 Aligned_cols=153 Identities=14% Similarity=0.194 Sum_probs=104.6
Q ss_pred ccEEeeCCeEEEEccc-CCCCCCcEEEEeCCEEecCCCCCeeEEeec-------------CCCCeEEEeeeCCccce-eE
Q psy2441 38 TKVVEISHTTVLHCSA-SGNPPPKISWIREMLPVDTSRNPRYNLLTS-------------GAPGTYIKIKPNLFSPL-SV 102 (212)
Q Consensus 38 ~~~v~~g~~v~l~C~~-~~~p~~~v~W~k~g~~l~~~~~~~~~~~~~-------------~~~g~~l~i~~~~~~~~-~v 102 (212)
.+.+.+|+.+.|.|.. .+.|.+.+.|+|+|.++... .++.+... +|.|.|.|......... ..
T Consensus 10 ~~~v~eg~~v~l~~~~~~~~p~~~v~W~k~~~~i~~~--~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~~~n~~g~~~s~ 87 (312)
T 2y23_A 10 VVNVDDDGVISLNFECDKMTPKSEFSWSKDYVSTEDS--PRLEVESKGNKTKMTFKDLGMDDLGIYSCDVTDTDGIASSY 87 (312)
T ss_dssp EEEECTTCCEEEEEECSSCCTTCCEEEEETTEECTTC--TTEEEEEETTEEEEEESSCCGGGCEEEEEEESSSCCCCEEE
T ss_pred eEEEecCCeEEEEEEEeCCCCCcEEEEEECCEECCCC--CCEEEEEeCCEEEEEECcCCccCCEEEEEEEEeCCCcEEEE
Confidence 5677889998888777 46788999999999998765 44444331 37777777666522111 11
Q ss_pred EeecCC----C-----CCCCccccCCc-ceeEecCCcEEEEEeee-eCCCCceEEEeCCEEecCCCCCceEEc--CCCCc
Q psy2441 103 YSADKI----P-----PGFPQITEAPS-TKVVEISHTTVLHCSAS-GNPPPKISWIREMLPVDTSRNPRYNLL--TSGAP 169 (212)
Q Consensus 103 ~~~~~~----~-----~~~p~~~~~~~-~~~~~~g~~~~l~C~~~-~~p~~~i~W~~~~~~~~~~~~~~~~~~--~~~~~ 169 (212)
...... . ..+|.+...+. ...+.+|+.+.|.|.+. +.|.+.+.|++++..+... .++... .....
T Consensus 88 ~l~v~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~~~~i~~~--~~~~~~~~~~~~~ 165 (312)
T 2y23_A 88 LIDEEELKRLLALSHEHKFPTVPVKSELAVEILEKGQVRFWMQAEKLSGNAKVNYIFNEKEIFEG--PKYKMHIDRNTGI 165 (312)
T ss_dssp EECHHHHHHHHHHHHHHHSCBCCEEEEEEEEECSSSCEEEEEEESCCCSSCEEEEEETTEEECSS--SSCEEEEETTTTE
T ss_pred EEEEeeeeeeecccccCCCCccccccCCceEEeeCCCEEEEEEEEeCCCCCEEEEEECCEECeeC--CcEEEEEccCCCE
Confidence 111000 0 00244333332 56788999999999998 8999999999999998875 333333 22334
Q ss_pred eeEEEcCCCCCCCeeEEEEEEcccc
Q psy2441 170 GALQITNSIEEDQGKYECVAENEVG 194 (212)
Q Consensus 170 ~~l~i~~~~~~d~g~y~C~a~n~~g 194 (212)
..|.|.++..+|+|.|.|.+.|..+
T Consensus 166 ~~L~i~~~~~~d~G~Y~C~~~~~~~ 190 (312)
T 2y23_A 166 IEMFMEKLQDEDEGTYTFQLQDGKA 190 (312)
T ss_dssp EEEEESCCCGGGCEEEEEEEESSSC
T ss_pred EEEEEccCCcccCEeEEEEEEeCCc
Confidence 5699999999999999999987543
No 143
>3umt_A SCFV heavy chain and light chain; stability engineering, anthrax, anti-BCLA antibody, immunoglobulin fold (VH and VL domains), antibody, immune S; HET: NHE; 1.80A {Mus musculus} PDB: 1xiw_D
Probab=99.77 E-value=3.1e-17 Score=117.02 Aligned_cols=175 Identities=17% Similarity=0.269 Sum_probs=109.3
Q ss_pred CCccEEeeCCeEEEEcccCCCC--CCcEEEEeCC--EE---e------------cCCCCCeeEEe-------------ec
Q psy2441 36 PSTKVVEISHTTVLHCSASGNP--PPKISWIREM--LP---V------------DTSRNPRYNLL-------------TS 83 (212)
Q Consensus 36 ~~~~~v~~g~~v~l~C~~~~~p--~~~v~W~k~g--~~---l------------~~~~~~~~~~~-------------~~ 83 (212)
+....+.+|++++|.|.+.+.+ .+.+.|||.. .. + ......|+.+. ..
T Consensus 9 ~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v 88 (256)
T 3umt_A 9 SGLELVKPGASVKISCKTSGYTFTEYTMHWVKQSHGKSLEWIGGINPNNGGTSYNQKFKGKAILTVDKSSSTAYLELRSL 88 (256)
T ss_dssp CCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTTCCEEECGGGTTTEEEEEEGGGTEEEEEECSC
T ss_pred cCceEEcCCCCEEEEEEEecccccccEEEEEEECCCCCcEEEEEEeccCCcccccccccceEEEEEecCCCEEEEEECCC
Confidence 3456789999999999998765 5789999832 11 1 00001233322 22
Q ss_pred --CCCCeEEEeeeCC----------ccceeEEeec---------CCCCCCCccccCCcceeEecCCcEEEEEeeeeCCCC
Q psy2441 84 --GAPGTYIKIKPNL----------FSPLSVYSAD---------KIPPGFPQITEAPSTKVVEISHTTVLHCSASGNPPP 142 (212)
Q Consensus 84 --~~~g~~l~i~~~~----------~~~~~v~~~~---------~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~ 142 (212)
.|.|.|.|..... ...+.|.... ...+.+|.+...+....+.+|+.+.|.|.+.+.+.+
T Consensus 89 ~~~DsG~Y~C~~~~~~~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C~~~~~~~~ 168 (256)
T 3umt_A 89 TSEDSAVYYCARDDRYPAWFAYWGQGTTVTVSSGGGGSGGGGSGGGGSTDIQLTQSPSSLSASLGERVSITCRASQDIGS 168 (256)
T ss_dssp CGGGCEEEEEEECCSTTCCSCEECCCEEEEECC---------------CCCCEEEECSEEEECTTCCEEEEEEESSCCTT
T ss_pred CcccCEEEEEEEccCCCccccEECCCEEEEEcCCCccccCcccCCCCccccEEEcCCCeEEEECCCCEEEEEEEecCCCc
Confidence 3788888876653 1223332110 001113556666666788999999999999999888
Q ss_pred ceEEEeC--CEEec----------CCCCCceEEcCCCCceeEEEcCCCCCCCeeEEEEEEcccccceecceEEEEeccee
Q psy2441 143 KISWIRE--MLPVD----------TSRNPRYNLLTSGAPGALQITNSIEEDQGKYECVAENEVGTEYSPSTMLYVKGTQV 210 (212)
Q Consensus 143 ~i~W~~~--~~~~~----------~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~n~~g~~~~~~~~l~v~~~~~ 210 (212)
.+.|+++ +.... .....++.........+|.|.++..+|+|.|.|.+.|..+........|.|+..+.
T Consensus 169 ~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~fg~gt~L~V~~~~~ 248 (256)
T 3umt_A 169 NLNWLQQKPDGTIKRLIYATSSLDSGVPKRFSGSRSGSDYSLTISSLESEDFVDYYCLQYASSPPTFGGGTKLEIKRAAA 248 (256)
T ss_dssp CEEEEEECTTCCEEEEEETTTEECTTSCTTEEEEEETTEEEEEECSCCGGGCSEEEEEECSSSSCEECCCEEEEEC----
T ss_pred EEEEEEECCCCCcEEEEEeccccCCccCCCEEEecCCCEEEEEECCCChhHCEEEEEEEeeCCCcEECCCEEEEEECCCc
Confidence 9999984 22111 00123444433333467999999999999999999987655555557888876543
No 144
>2p1y_A Bispecific alpha/beta TCR; autoimmunity, immunoglobulin fold, diabody, immune system; 2.42A {Mus musculus} PDB: 1bwm_A
Probab=99.77 E-value=2e-17 Score=116.58 Aligned_cols=162 Identities=19% Similarity=0.303 Sum_probs=102.6
Q ss_pred eEEeCCCccEEeeCCeEEEEcccCCCCCCcEEEEeCC--EEe-------------cCCCCCeeEE------------eec
Q psy2441 31 QITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREM--LPV-------------DTSRNPRYNL------------LTS 83 (212)
Q Consensus 31 ~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~k~g--~~l-------------~~~~~~~~~~------------~~~ 83 (212)
.+...|..+.+.+|++++|.|. .+.|.+.|.|+|+. ..+ ......|+.+ ...
T Consensus 2 ~v~q~p~~~~v~~G~~v~L~C~-~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v 80 (238)
T 2p1y_A 2 AVTQSPRNKVAVTGGKVTLSCN-QTNNHNNMYWYRQDTGHGLRLIHYSYGAGSTEKGDIPDGYKASRPSQENFSLILELA 80 (238)
T ss_dssp CEEEECSEEEEETTCCEEEEEE-ECSCCSEEEEEEEETTTEEEEEEEESSTTCCEECSSCTTCEEECCSSSBCEEEESSC
T ss_pred cceECccceEEeCCCEEEEEee-cCCCCccEEEEEECCCCCcEEEEEEecCcceeCCCccceEEEEccCCceEEEEEecC
Confidence 3556677889999999999999 67788999999951 110 0000123332 222
Q ss_pred --CCCCeEEEeeeCCc-----------cceeEEeecCCCC-----CCCccccCCcceeEecCCcEEEEEeeeeCCCCceE
Q psy2441 84 --GAPGTYIKIKPNLF-----------SPLSVYSADKIPP-----GFPQITEAPSTKVVEISHTTVLHCSASGNPPPKIS 145 (212)
Q Consensus 84 --~~~g~~l~i~~~~~-----------~~~~v~~~~~~~~-----~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~ 145 (212)
+|.|.|.|...... ..+.|......++ ..+.+...+....+.+|+.+.|.|.+.+.|.+.+.
T Consensus 81 ~~~DsG~Y~C~~~~~~g~~~~~~~~~~~~l~V~~~~~~~~p~~~~~~~~v~~~p~~~~v~~G~~v~L~C~~~~~p~~~i~ 160 (238)
T 2p1y_A 81 TPSQTSVYFCASGDLGQTNERLFFGHGTKLSVLGSADDAKKDAAKKDGQVRQSPQSLTVWEGETAILNCSYENSAFDYFP 160 (238)
T ss_dssp CGGGCEEEEEEEEC------CEEECCCEEEEEECCCHHHHHHHHHHHTCCEEECSEEEEETTSCEEEEEECCCTTCCEEE
T ss_pred CcccCeeEEEEEEeCCCccccceeCCCeEEEEeccCCCCcCCcccceeeEEccCceEEEeCCCeEEEEEEEecCCCCcEE
Confidence 37888888776531 1233322100000 00134444566778999999999999999999999
Q ss_pred EEeCCE--E---ec---C----CCCCceEEc--CCCCceeEEEcCCCCCCCeeEEEEEEccc
Q psy2441 146 WIREML--P---VD---T----SRNPRYNLL--TSGAPGALQITNSIEEDQGKYECVAENEV 193 (212)
Q Consensus 146 W~~~~~--~---~~---~----~~~~~~~~~--~~~~~~~l~i~~~~~~d~g~y~C~a~n~~ 193 (212)
|++++. . +. . ....++... ......+|.|.++..+|+|.|.|.|.|..
T Consensus 161 W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~ 222 (238)
T 2p1y_A 161 WYQQFPGEGPALLISILSVSDKKEDGRFTIFFNKREKKLSLHIADSQPGDSATYFCAAIDTN 222 (238)
T ss_dssp EEEECTTSCCEEEEEEETTCSEEEETTEEEEEETTTTEEEEEETTCCGGGCEEEEEEEEETT
T ss_pred EEEECCCCCCEEEEEEccCCCcccCCceEEEecCCCCeEEEEEcCCCHHHCEEEEEEEeeCC
Confidence 999641 1 10 0 012344433 22234689999999999999999999973
No 145
>1za6_B IGG heavy chain; immunoglobulin fold, CH2-domain-deletion, immune system; 2.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2
Probab=99.77 E-value=1.3e-18 Score=129.32 Aligned_cols=191 Identities=17% Similarity=0.188 Sum_probs=109.4
Q ss_pred ceeeEEEeeccCCCcceecccccC----CCCCeEEeCCCccEEeeCCeEEEEcccCCC-CC-CcEEEEeCCEEecC----
Q psy2441 3 IGTYIKIKPNLFSPLSVYSADKIP----PGFPQITEAPSTKVVEISHTTVLHCSASGN-PP-PKISWIREMLPVDT---- 72 (212)
Q Consensus 3 ~g~Y~C~~~~~~~~~~~~~~~~~~----~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~-p~-~~v~W~k~g~~l~~---- 72 (212)
+|.|+|.+.|..+..... ..+.+ ..+|.+...+....+.+|+.+.|.|.+.+. |. +.|.|+|+|..+..
T Consensus 91 ~G~Y~C~~~n~~~~~~~~-~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~k~g~~~~~~~~~ 169 (344)
T 1za6_B 91 TAVYFCTRSLNMAYWGQG-TLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFP 169 (344)
T ss_dssp CEEEEEEETTTTCEECCC-EEEEECSSCCBCCEEEEECCSCTTTSSSEEEEEEEEEEEBSSCCCEEETTTTBCTTEEECC
T ss_pred CEEEEEEEecCcceecCc-EEEEEecCCCCCCeEEEccccccccCCCcEEEEEEEeeEECCCeEEEEecCCccCceeECC
Confidence 589999999854322111 22222 245666544433446799999999999876 54 68999999875311
Q ss_pred ---CCCCee------EEeec--CCCCeEEEeeeCCccce--eEEee--c-------------------CCCCCCCccccC
Q psy2441 73 ---SRNPRY------NLLTS--GAPGTYIKIKPNLFSPL--SVYSA--D-------------------KIPPGFPQITEA 118 (212)
Q Consensus 73 ---~~~~~~------~~~~~--~~~g~~l~i~~~~~~~~--~v~~~--~-------------------~~~~~~p~~~~~ 118 (212)
....++ .+... ++ |.|.|......... ..... . .....+|.+...
T Consensus 170 ~~~~~~~~~~~~s~L~i~~~~~~d-G~Y~C~a~n~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~~~~~P~v~~~ 248 (344)
T 1za6_B 170 AVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCGGGSSGGGSGGQPREPQVYTL 248 (344)
T ss_dssp CEECTTSCEEEEEEEEEETTHHHH-BCEEEEEEEGGGTEEEEEEECCCCC--------------------CCBCCEEEEE
T ss_pred CeECCCCCEEEEEEEEEcHHHcCC-CcEEEEEEeCCCCccceEeecccccccccccCCCCCCccccccCCCCcCCEEEEe
Confidence 011222 22222 25 89999887633321 11110 0 011123444433
Q ss_pred CcceeEecCCcEEEEEeeeeC-C-CCceEEEeCCEEecCCCCCceEEcCCCC---ceeEEEcCCCCCCCeeEEEEEEccc
Q psy2441 119 PSTKVVEISHTTVLHCSASGN-P-PPKISWIREMLPVDTSRNPRYNLLTSGA---PGALQITNSIEEDQGKYECVAENEV 193 (212)
Q Consensus 119 ~~~~~~~~g~~~~l~C~~~~~-p-~~~i~W~~~~~~~~~~~~~~~~~~~~~~---~~~l~i~~~~~~d~g~y~C~a~n~~ 193 (212)
+.......|+.+.|.|.+.+. | .+.+.|++++..+......++....++. .+.|.+.....+|.|.|+|.|.|..
T Consensus 249 ~~~~~~~~~~~~~L~C~~~g~~P~~~~v~W~k~g~~~~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~~~g~YtC~a~~~~ 328 (344)
T 1za6_B 249 PPSRDELTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEA 328 (344)
T ss_dssp CCCGGGGGSSSEEEEEEEEEEBSSCCEEEEESSSSCCCSEEECCCEECTTSCEEEEEEEEECHHHHHTTCEEEEEEECTT
T ss_pred CCChHhccCCcEEEEEEEeeEECCCeEEEEEECCeECCCcEecceEECCCCcEEEEEEEEEChHHccCCCeEEEEEEcCC
Confidence 222112347779999999985 4 3589999999877542111111122221 1345666666677999999999975
Q ss_pred cc
Q psy2441 194 GT 195 (212)
Q Consensus 194 g~ 195 (212)
..
T Consensus 329 l~ 330 (344)
T 1za6_B 329 LH 330 (344)
T ss_dssp ST
T ss_pred CC
Confidence 43
No 146
>1qok_A MFE-23 recombinant antibody fragment; immunoglobulin, single-chain FV, anti-carcinoembryonic antigen; 2.4A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=99.77 E-value=2.6e-17 Score=119.05 Aligned_cols=176 Identities=18% Similarity=0.253 Sum_probs=109.7
Q ss_pred EeCCCccEEeeCCeEEEEcccCCCC--CCcEEEEeCC--EEec---------------CCCCCeeEEee-----------
Q psy2441 33 TEAPSTKVVEISHTTVLHCSASGNP--PPKISWIREM--LPVD---------------TSRNPRYNLLT----------- 82 (212)
Q Consensus 33 ~~~~~~~~v~~g~~v~l~C~~~~~p--~~~v~W~k~g--~~l~---------------~~~~~~~~~~~----------- 82 (212)
...|....+.+|++++|.|.+.+.+ .+.+.|||++ ..+. .....|+.+..
T Consensus 30 ~~~p~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I 109 (282)
T 1qok_A 30 LQQSGAELVRSGTSVKLSCTASGFNIKDSYMHWLRQGPEQGLEWIGWIDPENGDTEYAPKFQGKATFTTDTSSNTAYLQL 109 (282)
T ss_dssp EEECCCEEEETTCCEEEEEEEESSCGGGSCEEEEEECTTCCEEEEEEEETTTTEEEECGGGBTTEEEEEETTTTEEEEEE
T ss_pred EECCCCEEEeCCCeEEEEEeccCCCCCCceEEEEEeCCCCCcEEEEEEecCCCccccCchhcCcEEEEEecCCCeEEEEE
Confidence 3556788999999999999998775 5789999953 1110 00013443332
Q ss_pred --c--CCCCeEEEeeeCCc-----------cceeEEeecCCC--------CCCCccccCCcceeEecCCcEEEEEeeeeC
Q psy2441 83 --S--GAPGTYIKIKPNLF-----------SPLSVYSADKIP--------PGFPQITEAPSTKVVEISHTTVLHCSASGN 139 (212)
Q Consensus 83 --~--~~~g~~l~i~~~~~-----------~~~~v~~~~~~~--------~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~ 139 (212)
. +|.|.|.|...... ..+.|....... ..++.+...+....+.+|+.+.|.|.+.+.
T Consensus 110 ~~v~~~DsG~Y~C~~~n~~g~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C~~~~~ 189 (282)
T 1qok_A 110 SSLTSEDTAVYYCNEGTPTGPYYFDYWGQGTTVTVSSGGGGSGGGGSGGGGSENVLTQSPAIMSASPGEKVTITCSASSS 189 (282)
T ss_dssp CSCCGGGCEEEEEEEECSSSSCCCEEECCCEEEEEEC---------------CCCEEEECSEEEECTTCCEEEEEEESSC
T ss_pred CcCChhhCEEEEEEeccCCCccceeeeCCCEEEEEecCCcccCCccCCCCccceEEecCCCEEEEcCCCcEEEEEEecCC
Confidence 1 37888888776532 123333211000 012344445556778899999999999998
Q ss_pred CCCceEEEe--CCEEecC----------CCCCceEEcCCCCceeEEEcCCCCCCCeeEEEEEEcccccceecceEEEEec
Q psy2441 140 PPPKISWIR--EMLPVDT----------SRNPRYNLLTSGAPGALQITNSIEEDQGKYECVAENEVGTEYSPSTMLYVKG 207 (212)
Q Consensus 140 p~~~i~W~~--~~~~~~~----------~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~n~~g~~~~~~~~l~v~~ 207 (212)
+ +.+.|++ ++..+.. ....++....+....+|.|.++..+|+|.|.|.|.|..+........|.|+.
T Consensus 190 ~-~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~~~~~~~fg~gt~l~V~~ 268 (282)
T 1qok_A 190 V-SYMHWFQQKPGTSPKLWIYSTSNLASGVPARFSGSGSGTSYSLTISRMEAEDAATYYCQQRSSYPLTFGAGTKLELKR 268 (282)
T ss_dssp C-SCCEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSSCEECCCEEEEEC-
T ss_pred C-ceEEEEEECCCCCcEEEEEEecCCCCcccCCeEEecCCCEEEEEEccCChhHCEEEEEEEeeCCCceEeCCEEEEEec
Confidence 8 8999999 4543310 0124454333333468999999999999999999986543333336777765
Q ss_pred ce
Q psy2441 208 TQ 209 (212)
Q Consensus 208 ~~ 209 (212)
..
T Consensus 269 ~~ 270 (282)
T 1qok_A 269 AA 270 (282)
T ss_dssp --
T ss_pred cc
Confidence 43
No 147
>1hzh_H IGG, immunoglobulin heavy chain; antibody, immune system; HET: NAG BMA MAN GAL FUC; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2 PDB: 2ig2_H 1mco_H*
Probab=99.77 E-value=2.7e-18 Score=132.18 Aligned_cols=191 Identities=19% Similarity=0.240 Sum_probs=111.1
Q ss_pred eeeEEEeeccCCCcceeccccc----------------CCCCCeE-EeCCCccE-EeeCCeEEEEcccCCCCCC----cE
Q psy2441 4 GTYIKIKPNLFSPLSVYSADKI----------------PPGFPQI-TEAPSTKV-VEISHTTVLHCSASGNPPP----KI 61 (212)
Q Consensus 4 g~Y~C~~~~~~~~~~~~~~~~~----------------~~~~p~~-~~~~~~~~-v~~g~~v~l~C~~~~~p~~----~v 61 (212)
|.|+|.+.|..+.......... +..+|.+ ...|.... +.+|+.+.|.|.+.+.|++ .|
T Consensus 206 G~Y~C~a~n~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~p~v~~~~p~~~~~~~~G~~v~L~C~~~g~~p~p~~~~i 285 (457)
T 1hzh_H 206 QTYICNVNHKPSNTKVDKKAEPKSCDKTHTCPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKF 285 (457)
T ss_dssp SCCEEEEEEGGGTEEEEEECCCCCSCSSCSCCSCCCCCCSSSCEEEEECCCHHHHHCTTSCCCEEEEEECCCTTCCCCEE
T ss_pred ceEEEEEEeCCCCcceeEEecccCCCcccccCCCCCccccCCceEEeECcCchhhcccCCceEEEEEEEcccCCCCceEE
Confidence 8899999997765332211110 1225665 34444333 6789999999999887553 89
Q ss_pred EEEeCCEEecCC--------CCCeeEEee-----cCC---CCeEEEeeeCCccceeEEeecC---CCCCCCccccCCcc-
Q psy2441 62 SWIREMLPVDTS--------RNPRYNLLT-----SGA---PGTYIKIKPNLFSPLSVYSADK---IPPGFPQITEAPST- 121 (212)
Q Consensus 62 ~W~k~g~~l~~~--------~~~~~~~~~-----~~~---~g~~l~i~~~~~~~~~v~~~~~---~~~~~p~~~~~~~~- 121 (212)
.|+|+|.++... ....+.+.. ..+ .|.|.|.+........+..... ....+|.+...+..
T Consensus 286 ~W~k~~~~~~~~~~~~~~~~~~g~~~~~~~l~i~~~d~~d~G~Y~C~a~n~~~~~~~~~~v~~~~~~~~~P~v~~~~~~~ 365 (457)
T 1hzh_H 286 NWYVDGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLPPSR 365 (457)
T ss_dssp EEEETTEEECCCEEEEEEECTTSCEEEEEEECCCHHHHHHTCCEEEEEECTTSSSCEEEEECCCCCCCBCCEEEEECCCG
T ss_pred EEEeCCccccccccccceecCCCcEEEEEEEEECHHHccCCCcEEEEEeCCCCCCcceEEEEcccCCCCCCeEEEECCCc
Confidence 999999877532 012222221 113 8899998885322211111110 11223555443322
Q ss_pred eeEecCCcEEEEEeeeeCCCC--ceEEEeCCEEecCCCCCceEEcCCCC---ceeEEEcCCCCCCCeeEEEEEEccccc
Q psy2441 122 KVVEISHTTVLHCSASGNPPP--KISWIREMLPVDTSRNPRYNLLTSGA---PGALQITNSIEEDQGKYECVAENEVGT 195 (212)
Q Consensus 122 ~~~~~g~~~~l~C~~~~~p~~--~i~W~~~~~~~~~~~~~~~~~~~~~~---~~~l~i~~~~~~d~g~y~C~a~n~~g~ 195 (212)
..+..|+ +.|.|.+.+.+++ .+.|+++|..+............++. ...|.+.....+|.|.|+|.|.|....
T Consensus 366 ~~~~~~~-~~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~~~g~YtC~a~n~~l~ 443 (457)
T 1hzh_H 366 DELTKNQ-VSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALH 443 (457)
T ss_dssp GGGGSSE-EEEEEEEEEEBSSCCEEEEEETTEECCCEEECCCEECTTSCEEEEEEEEEEHHHHHTTCCEEEEEECTTSG
T ss_pred cccCCCc-EEEEEEEEeEECCCCEEEEEECCEECcceeecCceeCCCCCEEEEEEEEEChHHccCCCeEEEEEEECCCC
Confidence 2334444 9999999986443 89999999887543111111122211 134556666667899999999997543
No 148
>3nl4_L Antigen binding fragment, immunoglobulin IGG - LI; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_L
Probab=99.77 E-value=8.3e-18 Score=116.61 Aligned_cols=157 Identities=15% Similarity=0.226 Sum_probs=102.7
Q ss_pred CeEEeCCCccEEeeCCeEEEEcccCCCCCCcEEEEeCC--E---EecC-------CCCCeeEEe-----------ec--C
Q psy2441 30 PQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREM--L---PVDT-------SRNPRYNLL-----------TS--G 84 (212)
Q Consensus 30 p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~k~g--~---~l~~-------~~~~~~~~~-----------~~--~ 84 (212)
|.+...|..+.+.+|+++.|.|.+.+.|.+.+.|||++ . .+.. ....|+.+. .. .
T Consensus 2 ~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~ 81 (213)
T 3nl4_L 2 VVMTQTPASVSEPVGGTVTIKCQASQSISSYLAWYQQKPGQRPRLLIYETSTLASGVPSRFKGSGSGTDFTLTISDLECA 81 (213)
T ss_dssp CCEEEECSEEEEETTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEECSCCGG
T ss_pred ccEEeCCCeEEEcCCCCEEEEEEecCCCCceEEEEEECCCCCcEEEEEeCCccCCCCCccEEEecCCCEEEEEECCCChH
Confidence 45667788889999999999999999888999999942 1 1100 001333322 22 3
Q ss_pred CCCeEEEeeeCCc---------cceeEEeecCCCCCCCccccCCcceeEecCCcEEEEEeeee-CCCCceEEEeCCEEec
Q psy2441 85 APGTYIKIKPNLF---------SPLSVYSADKIPPGFPQITEAPSTKVVEISHTTVLHCSASG-NPPPKISWIREMLPVD 154 (212)
Q Consensus 85 ~~g~~l~i~~~~~---------~~~~v~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~-~p~~~i~W~~~~~~~~ 154 (212)
|.|.|.|...... ..+.|.. ...+|.+...+....+.+|+.+.|.|.+.+ .|.+.+.|++++..+.
T Consensus 82 D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~----~~~~p~v~~~~~~~~~~~g~~v~l~C~~~g~~P~~~v~W~k~g~~~~ 157 (213)
T 3nl4_L 82 DAATYYCQSTYENPTYVSFGGGTEVGVKG----DPVAPTVLIFPPSADLVATGTVTIVCVANKYFPDVTVTWEVDGTTQT 157 (213)
T ss_dssp GCEEEEEEECCSSTTTCEECCCEEEEEEC----CCBCCEEEEECCCHHHHTTSEEEEEEEEEEEBSCCEEEEEETTEECC
T ss_pred HCEEEEEecCCCCceeEEeCCCeEEEEeC----CCcCCeEEEeCCchhhccCCcEeEEEEEecccCCcEEEEEeCCccCC
Confidence 7888888766521 1233322 223355544333334556999999999988 8989999999998876
Q ss_pred CCCCCceE--EcCCCC---ceeEEEcCCCCCCCeeEEEEEE
Q psy2441 155 TSRNPRYN--LLTSGA---PGALQITNSIEEDQGKYECVAE 190 (212)
Q Consensus 155 ~~~~~~~~--~~~~~~---~~~l~i~~~~~~d~g~y~C~a~ 190 (212)
........ ...++. .+.|.|.++..+|.|.|+|.|.
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~Y~C~a~ 198 (213)
T 3nl4_L 158 TGIENSKTPQNSADCTYNLSSTLTLTSTEYNSHKEYTCKVT 198 (213)
T ss_dssp SSEEEEECCCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEE
T ss_pred CCeecccCcccCCCCeEEEEEEEEecHHHcCCCCeEEEEEE
Confidence 42000000 001111 2578999999999999999998
No 149
>3juy_B 3B3 single chain variant HIV-1 antibody; envelope protein GP120, broadly neutralizing antibody, 3B3 single chain variable fragment, immune system; 2.50A {Homo sapiens}
Probab=99.77 E-value=2.6e-17 Score=117.44 Aligned_cols=179 Identities=17% Similarity=0.202 Sum_probs=111.5
Q ss_pred CCCeEEeCCCccEEeeCCeEEEEcccCCC--CCCcEEEEeCC--EE---e------------cCCCCCeeEEe-------
Q psy2441 28 GFPQITEAPSTKVVEISHTTVLHCSASGN--PPPKISWIREM--LP---V------------DTSRNPRYNLL------- 81 (212)
Q Consensus 28 ~~p~~~~~~~~~~v~~g~~v~l~C~~~~~--p~~~v~W~k~g--~~---l------------~~~~~~~~~~~------- 81 (212)
.+|.+...+..+.+.+|++++|.|.+.+. +.+.+.|||.. .. + ......|+.+.
T Consensus 5 ~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~ 84 (256)
T 3juy_B 5 HHQVQLVQSGAEVKKPGASVKVSCQASGYRFSHFTVHWVRQAPGQRFEWMGWINPYNGNKEFSAKFQDRVTFTADTSANT 84 (256)
T ss_dssp --CCEEEECCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECTTTTTTEEEEEETTTTE
T ss_pred cceEEEEecCCceecCCCeEEEEEEeecccccCceEEEEEECCCCCcEEEEEEEcCCCcEeecccCcceEEEEEecCCCE
Confidence 45667778889999999999999999773 56789999732 10 0 01112344333
Q ss_pred ------ec--CCCCeEEEeeeCC------------------ccceeEEeecCCC--------CCCCccccCCcceeEecC
Q psy2441 82 ------TS--GAPGTYIKIKPNL------------------FSPLSVYSADKIP--------PGFPQITEAPSTKVVEIS 127 (212)
Q Consensus 82 ------~~--~~~g~~l~i~~~~------------------~~~~~v~~~~~~~--------~~~p~~~~~~~~~~~~~g 127 (212)
.. +|.|.|.|..... ...+.|....... ..++.+...+....+.+|
T Consensus 85 ~~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G 164 (256)
T 3juy_B 85 AYMELRSLRSADTAVYYCARVGEWGWDDSPYDNYYMDVWGKGTTVIVSSGGGGSGGGGSGGGGSEIVLTQAPGTLSLSPG 164 (256)
T ss_dssp EEEEECSCCGGGCEEEEEEECCCCCTTCCTTTTCSCCEECCCEEEEECSCC----------CCCCCCEEEECSEEEECTT
T ss_pred EEEEECCCCcccCEEEEEeEEeccccccccccccceeEECCceEEeecCCcccccccccCCCcceeEEEecCCeEEEeCC
Confidence 11 3777888776553 1122222110000 002455556667788999
Q ss_pred CcEEEEEeeeeCCC-CceEEEeC--CEEecC----------CCCCceEEcCCCCceeEEEcCCCCCCCeeEEEEEEcccc
Q psy2441 128 HTTVLHCSASGNPP-PKISWIRE--MLPVDT----------SRNPRYNLLTSGAPGALQITNSIEEDQGKYECVAENEVG 194 (212)
Q Consensus 128 ~~~~l~C~~~~~p~-~~i~W~~~--~~~~~~----------~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~n~~g 194 (212)
+++.|.|.+.+.+. +.+.|++. +..... ....++....+....+|.|.++..+|+|.|.|.|.|..+
T Consensus 165 ~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~~ 244 (256)
T 3juy_B 165 ERATFSCRSSHSIRSRRVAWYQHKPGQAPRLVIHGVSNRASGISDRFSGSGSGTDFTLTITRVEPEDFALYYCQVYGASS 244 (256)
T ss_dssp SCEEEEEEESSCCTTCCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCSEEEEEECCSSC
T ss_pred CCEEEEEEECCCcCCeeEEEEEECCCCCcEEEEEecCccCCccCCcEEEEccCCEEEEEECCCCHhHCEEEEEEEeeCCC
Confidence 99999999988876 89999983 221110 012344443333346799999999999999999998655
Q ss_pred cceecceEEEEe
Q psy2441 195 TEYSPSTMLYVK 206 (212)
Q Consensus 195 ~~~~~~~~l~v~ 206 (212)
........|.|+
T Consensus 245 ~~~g~gt~l~V~ 256 (256)
T 3juy_B 245 YTFGQGTKLERK 256 (256)
T ss_dssp CEECCCEEEEEC
T ss_pred ceEcCCEEEEEC
Confidence 444443566553
No 150
>2cqv_A MLCK, myosin light chain kinase, smooth muscle and non- muscle isozymes; IG fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.76 E-value=1.2e-17 Score=104.56 Aligned_cols=96 Identities=22% Similarity=0.312 Sum_probs=81.4
Q ss_pred CCccccCCcceeEecCCcEEEEEeeeeCCCCceEEEeCCEEecCCCCCceEEcCCCCceeEEEcCCCCCCCeeEEEEEEc
Q psy2441 112 FPQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREMLPVDTSRNPRYNLLTSGAPGALQITNSIEEDQGKYECVAEN 191 (212)
Q Consensus 112 ~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~n 191 (212)
+|.+...+....+.+|+.+.|.|.+.+.|.|.+.|++++..+... .++..........|.|.++..+|+|.|+|.|.|
T Consensus 7 pp~i~~~~~~~~v~~G~~v~l~C~~~g~p~p~i~W~k~~~~~~~~--~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N 84 (114)
T 2cqv_A 7 GPQIIQFPEDQKVRAGESVELFGKVTGTQPITCTWMKFRKQIQES--EHMKVENSENGSKLTILAARQEHCGCYTLLVEN 84 (114)
T ss_dssp CCEESCCCCSEEEETTCCEEEEEEEESSSSCEEEEEESSSBCCCS--SSEEEEECSSEEEEEETTCCTTTCEEEEEEEEC
T ss_pred CCEEEeCCCCeEEeCCCeEEEEEEEEcCCCCEEEEEECCEECcCC--CCEEEEEcCCEEEEEECCCChhcCEEEEEEEEE
Confidence 477777888888999999999999999999999999999887764 455555444457899999999999999999999
Q ss_pred ccccceecceEEEEeccee
Q psy2441 192 EVGTEYSPSTMLYVKGTQV 210 (212)
Q Consensus 192 ~~g~~~~~~~~l~v~~~~~ 210 (212)
..|..... +.|.|.+.+.
T Consensus 85 ~~g~~~~~-~~l~V~~~p~ 102 (114)
T 2cqv_A 85 KLGSRQAQ-VNLTVVDKPD 102 (114)
T ss_dssp SSCEEECC-EEEEEECSCS
T ss_pred CCCcEEEE-EEEEEECCCC
Confidence 99988877 8888876543
No 151
>2zg1_A Sialic acid-binding IG-like lectin 5; siglec-5 inhibitory receptor, two-domain structure, V-SET, C2-SET, IG-like domain, 6'-sialyllactose complex; HET: SIA; 2.70A {Homo sapiens} PDB: 2zg3_A* 2zg2_A
Probab=99.76 E-value=1.6e-17 Score=115.18 Aligned_cols=158 Identities=21% Similarity=0.284 Sum_probs=99.1
Q ss_pred EeCCCccEEeeCCeEEEEcccCCC-------CCCcEEEEeCCEE------ec---------CCCCCeeEE----------
Q psy2441 33 TEAPSTKVVEISHTTVLHCSASGN-------PPPKISWIREMLP------VD---------TSRNPRYNL---------- 80 (212)
Q Consensus 33 ~~~~~~~~v~~g~~v~l~C~~~~~-------p~~~v~W~k~g~~------l~---------~~~~~~~~~---------- 80 (212)
...|..+.+.+|+++.|.|.+.+. +.+.+.|||++.. +. .....|+.+
T Consensus 4 ~~~p~~v~v~~G~~v~L~C~~~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~s 83 (214)
T 2zg1_A 4 LQVQKSVTVQEGLCVLVPCSFSYPWRSWYSSPPLYVYWFRDGEIPYYAEVVATNNPDRRVKPETQGRFRLLGDVQKKNCS 83 (214)
T ss_dssp EECCSEEEEETTCCEEECCEEECCCCCCSCCCCEEEEEEETTCCGGGCCBSEESCTTSCBCTTTTTTEEECSCGGGTBCC
T ss_pred eeCCcEEEEecCccEEEeeeeecCCcccCCCCceEEEEEecCCCCcccceEecCCcccccCccccCceEEeccCCCCeEE
Confidence 345777889999999999998643 4678999998642 10 111133332
Q ss_pred ---eec--CCCCeEEEeeeCCc----------cceeEEeecCCCCCCCccccCCcceeEecCCcEEEEEeeeeC----CC
Q psy2441 81 ---LTS--GAPGTYIKIKPNLF----------SPLSVYSADKIPPGFPQITEAPSTKVVEISHTTVLHCSASGN----PP 141 (212)
Q Consensus 81 ---~~~--~~~g~~l~i~~~~~----------~~~~v~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~----p~ 141 (212)
... .|.|.|.|...... ..+.|.. ++..|.+... . .+.+|+.+.|.|.+.+. |.
T Consensus 84 L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~----~~~~p~i~~~-~--~~~~G~~v~L~C~~~~~~~~~p~ 156 (214)
T 2zg1_A 84 LSIGDARMEDTGSYFFRVERGRDVKYSYQQNKLNLEVTA----LIEKPDIHFL-E--PLESGRPTRLSCSLPGSCEAGPP 156 (214)
T ss_dssp EEECSCCGGGCEEEEEEEEETTTEEEECCSSCEEEEEEC----CCCCCEEC---C--CCCTTCCEEEEEECTTCCSCSSC
T ss_pred EEEccCCHhhCceEEEEEEcCCCceeeecCCceEEEEec----CCCCCceecC-c--cccCCCeEEEEEEeccCCCCCCC
Confidence 222 37888888665422 1222322 2223444332 1 25689999999999764 78
Q ss_pred CceEEEeCCEEecCCCCCceEEcCCCCceeEEEcCCCCCCCeeEEEEEEcccccceecceEEEEe
Q psy2441 142 PKISWIREMLPVDTSRNPRYNLLTSGAPGALQITNSIEEDQGKYECVAENEVGTEYSPSTMLYVK 206 (212)
Q Consensus 142 ~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~n~~g~~~~~~~~l~v~ 206 (212)
|.+.|++++..... .+. .. .+.|.|..+..+|.|.|+|.|.|..+..... ..+.++
T Consensus 157 p~v~W~~~~~~~~~---~~~--~~---~~~L~i~~~~~~~~g~Y~C~a~n~~~~~~~~-~~v~l~ 212 (214)
T 2zg1_A 157 LTFSWTGNALSPLD---PET--TR---SSELTLTPRPEDHGTNLTCQMKRQGAQVTTE-RTVQLN 212 (214)
T ss_dssp CEEEEESSTTSSSC---SSC--CC---SSEEEECCCTTCCSCEEEEEEECC----CCE-EEEECC
T ss_pred ceEEEeCCCCccCC---CCc--ee---EEEEEEecccHHcCcEEEEEEEeCCCCcceE-EEEEEE
Confidence 89999998854322 111 12 2789999999999999999999986554444 444443
No 152
>1nfd_E H57 FAB; complex (immunoreceptor-immunoglobulin), complex (immunorece immunoglobulin) complex; HET: NAG NDG; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.76 E-value=1.3e-18 Score=120.62 Aligned_cols=162 Identities=16% Similarity=0.257 Sum_probs=104.3
Q ss_pred EEeCCCccEEeeCCeEEEEcccCCCCCCcEEEEeC--CEEec----------CCCCCeeEEe-----------ec--CCC
Q psy2441 32 ITEAPSTKVVEISHTTVLHCSASGNPPPKISWIRE--MLPVD----------TSRNPRYNLL-----------TS--GAP 86 (212)
Q Consensus 32 ~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~k~--g~~l~----------~~~~~~~~~~-----------~~--~~~ 86 (212)
+.. |....+.+|+++.|.|.+.+.|.+.+.|||+ |..+. .....|+.+. .. .|.
T Consensus 3 v~q-p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~ 81 (212)
T 1nfd_E 3 LIQ-PSSASVTVGETVKITCSGDQLPKNFAYWFQQKSDKNILLLIYMDNKRPSGIPERFSGSTSGTTATLTISGAQPEDE 81 (212)
T ss_dssp EEC-CSEEEEETTSCCCEEEEETTGGGSCCEEEEECTTCCEEEEEBTTTBCCTTSCTTEEEEEETTEEEEEETTCCGGGC
T ss_pred eEC-CCeEEEeCCCcEEEEEecCCCCCCeEEEEEECCCCCcEEEEEeccccCCCccccEEEEeeCCEEEEEECcCCcccC
Confidence 344 7778899999999999998888788999985 32221 0001333222 11 488
Q ss_pred CeEEEeeeC---------CccceeEEeecCCCCCCCccccCCcceeEecCCcEEEEEeeeeC-CC-CceEEEeCCEEecC
Q psy2441 87 GTYIKIKPN---------LFSPLSVYSADKIPPGFPQITEAPSTKVVEISHTTVLHCSASGN-PP-PKISWIREMLPVDT 155 (212)
Q Consensus 87 g~~l~i~~~---------~~~~~~v~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~-p~-~~i~W~~~~~~~~~ 155 (212)
|.|.|.... ....+.|... +..+|.+...+....+.+|+.+.|.|.+.+. |. +.+.|++++..+..
T Consensus 82 G~Y~C~~~n~~~~~~~~~~~~~l~V~~~---~~~~p~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~~~~ 158 (212)
T 1nfd_E 82 AAYYCLSSYGDNNDLVFGSGTQLTVLRG---PKSSPKVTVFPPSPEELRTNKATLVCLVNDFYPGSATVTWKANGATIND 158 (212)
T ss_dssp SEEEEEEEETTTTEEEECCCEEEEEECC---CCBCCEEECCCCCHHHHHTTEECCCEEEEEEBSSCCEEEEEETTEEECS
T ss_pred EEEEEEEEcccCcccccCCceEEEEccC---CCCCCEEEeeCCchHhccCCceEEEEEEEeeECCccEEEEEECCeEcCC
Confidence 999998773 1122333221 1123555544433334579999999999886 54 79999999988865
Q ss_pred CCCCceEEcCCC-C---ceeEEEcCCCCCCCeeEEEEEEccccccee
Q psy2441 156 SRNPRYNLLTSG-A---PGALQITNSIEEDQGKYECVAENEVGTEYS 198 (212)
Q Consensus 156 ~~~~~~~~~~~~-~---~~~l~i~~~~~~d~g~y~C~a~n~~g~~~~ 198 (212)
.. .......+. + .+.|.|.++..+|.|.|+|.|.|..+....
T Consensus 159 ~~-~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~ 204 (212)
T 1nfd_E 159 GV-KTTKPSKQGQNYMTSSYLSLTADQWKSHNRVSCQVTHEGETVEK 204 (212)
T ss_dssp SC-BCCCCBCSSSCEEEEEBCCEEHHHHHTCSCEEEEEECTTTTCCC
T ss_pred Ce-ecCCceecCCCceEEEEEEEchhhcCCCCeEEEEEEeCCceEEE
Confidence 41 100011110 0 146889999999999999999998776443
No 153
>1q0x_L FAB 9B1, light chain; anti-morphine antibody, FAB fragment, immune system; HET: PG4; 1.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q0y_L* 1ngp_L* 1ngq_L 3ks0_L* 1gig_L 2vir_A 2vis_A* 2vit_A 1sm3_L 4a6y_L 1ind_L* 1ine_L* 1yuh_L* 2zpk_L 3rhw_K* 3ri5_K* 3ria_K* 3rif_K* 1mfe_L* 1mfb_L* ...
Probab=99.76 E-value=7.1e-18 Score=116.91 Aligned_cols=161 Identities=17% Similarity=0.235 Sum_probs=100.4
Q ss_pred EEeCCCccEEeeCCeEEEEcccCCCC---CCcEEEEeCC--EEe----------cCCCCCeeEE-----------eec--
Q psy2441 32 ITEAPSTKVVEISHTTVLHCSASGNP---PPKISWIREM--LPV----------DTSRNPRYNL-----------LTS-- 83 (212)
Q Consensus 32 ~~~~~~~~~v~~g~~v~l~C~~~~~p---~~~v~W~k~g--~~l----------~~~~~~~~~~-----------~~~-- 83 (212)
+.. |....+.+|+++.|.|.+.+.| .+.|.|||++ ..+ ......|+.+ ...
T Consensus 4 v~~-p~~~~v~~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~ 82 (212)
T 1q0x_L 4 VTQ-ESALTTSPGETVTLTCRSSTGAVTTSNYANWVQEKPDHLFTGLIGGTNNRAPGVPARFSGSLIGDKAALTITGAQT 82 (212)
T ss_dssp EEE-CSEEEECTTCCEEEEEEESSSCCCGGGCCEEEEEETTTEEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCG
T ss_pred EEC-CCeEeecCCCCEEEEEEecccccCCCCeEEEEEeCCCCCceEEEEcCcccCCcccccEEEEeeCCEEEEEECCCCc
Confidence 445 7788899999999999998877 4789999963 222 0011133332 221
Q ss_pred CCCCeEEEeeeCCcc-------ceeEEeecCCCCCCCccccCCcceeEecCCcEEEEEeeeeCC-CC-ceEEEeCCEEec
Q psy2441 84 GAPGTYIKIKPNLFS-------PLSVYSADKIPPGFPQITEAPSTKVVEISHTTVLHCSASGNP-PP-KISWIREMLPVD 154 (212)
Q Consensus 84 ~~~g~~l~i~~~~~~-------~~~v~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p-~~-~i~W~~~~~~~~ 154 (212)
.|.|.|.|....... .+.|... +..+|.+...+....+..|+.+.|.|.+.+.+ .+ .+.|++++..+.
T Consensus 83 ~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~---~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~l~ 159 (212)
T 1q0x_L 83 EDEAIYFCALWSNNKLVFGGGTKLTVLGQ---PKSSPTVTLFPPSSEELSTAKATLVCTITDFYPGVVTVDWKVDGTPVT 159 (212)
T ss_dssp GGCEEEEEEEECSSCEEECCCEEEEECCS---CCBCCEEEEECCCHHHHTTTEEEEEEEEEEEBSSCCEEEEEETTEEEC
T ss_pred cCCEEEEEEEecCchhhcCCCeEEEEecC---CCCCCeeEEeCCCHHHccCCcEEEEEEEEEEeCCCeEEEEEECCEeCC
Confidence 378888887766321 2222111 11235555433332334688999999998854 43 899999998886
Q ss_pred CCCC-CceEEcCCCC---ceeEEEcCCCCCCCeeEEEEEEcccccc
Q psy2441 155 TSRN-PRYNLLTSGA---PGALQITNSIEEDQGKYECVAENEVGTE 196 (212)
Q Consensus 155 ~~~~-~~~~~~~~~~---~~~l~i~~~~~~d~g~y~C~a~n~~g~~ 196 (212)
.... .......++. .+.|.|.....+|.|.|+|.|.|.....
T Consensus 160 ~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~ 205 (212)
T 1q0x_L 160 AGMETTQPSKQSNNKYMASSYLTLTARAWERHSSYSCQVTHEGHSS 205 (212)
T ss_dssp TTEEECCCEECTTSCEEEEEEEEEEHHHHTTCCEEEEEEEETTEEE
T ss_pred CCeecCCceeCCCCCEEEEEEEEEcHHHccCCCcEEEEEEeCCcce
Confidence 5310 0111111111 2468898888999999999999976543
No 154
>3r06_A Anti-mouse CD3epsilon antibody 2C11 FAB light CHA; anti-CD3epsilon, T-cell receptor, signalling, IMMU; 2.50A {Cricetulus migratorius} PDB: 3r08_L 3ld8_B 3ldb_B*
Probab=99.76 E-value=1.5e-17 Score=115.26 Aligned_cols=163 Identities=16% Similarity=0.231 Sum_probs=104.2
Q ss_pred CeEEeCCCccEEeeCCeEEEEcccCCCCCCcEEEEeCC---EE--ec-------CCCCCeeEE-----------eec--C
Q psy2441 30 PQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREM---LP--VD-------TSRNPRYNL-----------LTS--G 84 (212)
Q Consensus 30 p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~k~g---~~--l~-------~~~~~~~~~-----------~~~--~ 84 (212)
|.+...|..+.+.+|+.+.|.|.+.+.|.+.+.|||.+ .+ +. .....|+.+ ... .
T Consensus 2 ~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~ 81 (213)
T 3r06_A 2 IQMTQSPSSLPASLGDRVTINCQASQDISNYLNWYQQKPGKAPKLLIYYTNKLADGVPSRFSGSGSGRDSSFTISSLESE 81 (213)
T ss_dssp CCEEEECSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGG
T ss_pred CeeEeCCCEEEecCCCcEEEEEEeCCCcCceEEEEEECCCCCcEEEEEEcCcCCCCCCCcEEEeccCCEEEEEECCCCcc
Confidence 45666778889999999999999999888999999832 11 00 001233332 222 3
Q ss_pred CCCeEEEeeeCC-------ccceeEEeecCCCCCCCccccCCcceeEecCCcEEEEEeeeeCCC--CceEEEeCCEEecC
Q psy2441 85 APGTYIKIKPNL-------FSPLSVYSADKIPPGFPQITEAPSTKVVEISHTTVLHCSASGNPP--PKISWIREMLPVDT 155 (212)
Q Consensus 85 ~~g~~l~i~~~~-------~~~~~v~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~--~~i~W~~~~~~~~~ 155 (212)
|.|.|.|..... ...+.| .....+|.+...+....+..|+.+.|.|.+.+.++ +.+.|++++..+..
T Consensus 82 D~G~Y~C~~~~~~~~~~~~~~~l~V----~~~~~~p~v~~~~~~~~~~~~~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~ 157 (213)
T 3r06_A 82 DIGSYYCQQYYNYPWTFGPGTKLEI----KRADAKPTVSIFPPSSEQLGTGSATLVCFVNNFYPKDINVKWKVDGSEKRD 157 (213)
T ss_dssp GCSEEEEEECSSSSCEECCCEEEEE----CCCCBCCEEEEECCCHHHHTTTEEEEEEEEEEEBSSCEEEEEEETTEEECT
T ss_pred cCEEEEEecccCCceEEcCCceEEE----eccCCCceeeeeCCCceecCCCCcEEEEEEeeecCCceEEEEEECCcccCC
Confidence 888898887652 122333 12233466655444444456888999999988654 38999999988865
Q ss_pred CC--CCceEEcCCCC---ceeEEEcCCCCCCCeeEEEEEEcccccc
Q psy2441 156 SR--NPRYNLLTSGA---PGALQITNSIEEDQGKYECVAENEVGTE 196 (212)
Q Consensus 156 ~~--~~~~~~~~~~~---~~~l~i~~~~~~d~g~y~C~a~n~~g~~ 196 (212)
.. ........++. ...|.|.....+|.|.|+|.|.|.....
T Consensus 158 ~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~g~YtC~v~n~~~~~ 203 (213)
T 3r06_A 158 GVLQSVTDQDSKDSTYSLSSTLSLTKADYERHNLYTCEVTHKTSTA 203 (213)
T ss_dssp TEEEEECCCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEEETTCSS
T ss_pred ceEeccCceeCCCCcEEEEEEEEeCHHHhccCCeEEEEEEecccCc
Confidence 20 00111111111 2467788888889999999999975443
No 155
>1f3r_B FV antibody fragment; IG-fold, immuno complex, antibody-antigen, beta-turn, immune system; HET: NLE; NMR {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.1
Probab=99.76 E-value=1e-17 Score=119.61 Aligned_cols=171 Identities=22% Similarity=0.269 Sum_probs=105.4
Q ss_pred CCccEEeeCCeEEEEcccCCCC--CCcEEEEeCC--E---Eec-----------CCCCCeeEEe-------------ec-
Q psy2441 36 PSTKVVEISHTTVLHCSASGNP--PPKISWIREM--L---PVD-----------TSRNPRYNLL-------------TS- 83 (212)
Q Consensus 36 ~~~~~v~~g~~v~l~C~~~~~p--~~~v~W~k~g--~---~l~-----------~~~~~~~~~~-------------~~- 83 (212)
|....+.+|++++|.|.+.+.| .+.|.|||++ . .+. .....|+.+. ..
T Consensus 7 p~~~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~ 86 (257)
T 1f3r_B 7 SGPGLVRPSETLSLTCTVSGFSLTSFSVSWVRHPSGKGPEWMGRMWYDGYTAYNSALKSRLSISRDTSKNQVFLKMNSLQ 86 (257)
T ss_dssp ECCSEECTTSEEEEEEEEESSCTTTSCCEEEEEETTSCCEEEEEECSSSCEEECSSSSTTEEEEEETTTTEEEEEEESCC
T ss_pred CCCccccCCceEEEEEEEecccCCCccEEEEEeCCCCCcEEEEEEecCCceeeCcccCCcEEEEEECCCCEEEEEECCCC
Confidence 3456899999999999998875 6789999952 1 110 0012344332 21
Q ss_pred -CCCCeEEEeeeCCc---------------cceeEEeecCCC--------CCCCccccCCcceeEecCCcEEEEEeeeeC
Q psy2441 84 -GAPGTYIKIKPNLF---------------SPLSVYSADKIP--------PGFPQITEAPSTKVVEISHTTVLHCSASGN 139 (212)
Q Consensus 84 -~~~g~~l~i~~~~~---------------~~~~v~~~~~~~--------~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~ 139 (212)
+|.|.|.|...... ..+.|....... ..++.+...+....+.+|+.+.|.|.+.+.
T Consensus 87 ~~DsG~Y~C~a~n~~g~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C~~~~~ 166 (257)
T 1f3r_B 87 TDDTGTYYCTRDLYGGYPLGFWYFDFWGPGTMVTVSSGGGGSGGGGSGGGGSDIKLTQSPSLLSASVGDRVTLSCKGSQN 166 (257)
T ss_dssp TTCCEEEEEEEESSSSCCSSCCCEEEECCCEEEEECSSCCSSCCSSSCCCCCEECSCEETSEECCCTTCCEEEEEECSSC
T ss_pred cccCEEEEEEEcccccCccccccccccCCceEEEEEeCCccccccccCCCccceEEEccCCEEEEcCCCCEEEEEEECCc
Confidence 48888888876541 122222110000 001223334555668899999999999999
Q ss_pred CCCceEEEe--CCEEecC----------CCCCceEEcCCCCceeEEEcCCCCCCCeeEEEEEEcccccceecceEEEEec
Q psy2441 140 PPPKISWIR--EMLPVDT----------SRNPRYNLLTSGAPGALQITNSIEEDQGKYECVAENEVGTEYSPSTMLYVKG 207 (212)
Q Consensus 140 p~~~i~W~~--~~~~~~~----------~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~n~~g~~~~~~~~l~v~~ 207 (212)
+.+.+.|++ ++..+.. ....++....+.....|.|.++..+|+|.|.|.|.|.. ........|.|+.
T Consensus 167 ~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~-~~~g~gt~l~V~~ 245 (257)
T 1f3r_B 167 INNYLAWYQQKLGEAPKLLIYNTNSLQTGIPSRFSGSGSGTDYTLTISSLQPEDVATYFCYQYNNG-YTFGAGTKLELKA 245 (257)
T ss_dssp CBTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEEBTEEEEEECSCCGGGCSEEEEEEESSS-EEECCCCEECCSS
T ss_pred CCCcEEEEEECCCCCcEEEEEEccCCCCCcCCCEEEecCCCEEEEEECCCChhhCEEEEEEEeCCC-CeECCCEEEEEeC
Confidence 888999999 4443210 01234443322234689999999999999999999964 2222225666654
No 156
>3tf7_C 42F3 MUT7 SCFV (42F3 alpha chain, linker, 42F3 BE; IG and MHC, antigen recognition, TCR-PMHC, membrane receptor system; 2.75A {Mus musculus}
Probab=99.76 E-value=1.5e-16 Score=113.53 Aligned_cols=177 Identities=15% Similarity=0.193 Sum_probs=110.7
Q ss_pred CeEEeCCCccEEeeCCeEEEEcccCCCCCCcEEEEeCC--E---Eec----CC----CCCeeE-------------Eeec
Q psy2441 30 PQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREM--L---PVD----TS----RNPRYN-------------LLTS 83 (212)
Q Consensus 30 p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~k~g--~---~l~----~~----~~~~~~-------------~~~~ 83 (212)
..+...|..+.+.+|++++|.|.+.+.|.+.+.|||.. . .+. .. ...|+. |...
T Consensus 4 ~~v~q~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~sL~I~~v 83 (256)
T 3tf7_C 4 QSVTQPDARVTVSEGASLQLRCKYSYSATPYLFWYVQYPRQGPQMLLKYYSGDPVVQGVNGFEAEFSKSDSSFHLRKASV 83 (256)
T ss_dssp CEEECSCSEEEEETTSCEEECCEEECSSCCEEEEEEECTTSCCEEEEEECSSCSEEECSTTCEEEEETTTTEEEEEESSC
T ss_pred cEEEecCceEEecCCCeEEEEEEeCCCCCceEEEEEECCCCCeEEEEEEccCCcccccCCCeEEEEcCCCCEEEEEECCC
Confidence 45667788889999999999999988889999999832 1 110 00 012222 2222
Q ss_pred --CCCCeEEEeeeCC----------ccceeEEeec-------------CCCCCCCccccCCcceeEecCCcEEEEEeeee
Q psy2441 84 --GAPGTYIKIKPNL----------FSPLSVYSAD-------------KIPPGFPQITEAPSTKVVEISHTTVLHCSASG 138 (212)
Q Consensus 84 --~~~g~~l~i~~~~----------~~~~~v~~~~-------------~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~ 138 (212)
.|.|.|.|..... ...+.|.... .....+|.+...+....+.+|+.+.|.|.+.+
T Consensus 84 ~~~DsG~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~~v~~G~~v~L~C~~~~ 163 (256)
T 3tf7_C 84 HRSDSAVYFCAVSAKGTGSKLSFGKGAKLTVSPGGGGSGGGGSGGGGSGGGGSEAAVTQSPRNKVTVTGENVTLSCRQTN 163 (256)
T ss_dssp CGGGCSEEEEEEECTTCTTCEEECCCEEEEEEC---------------------CCEEESCSEEEEETTCCEEECEEECS
T ss_pred CcccCEEEEEEEecCCCccceEECCCeEEEEeCCCCCcCCCCcCcccCCCCcCccEEEecCCEEEEeCCCcEEEEEEcCC
Confidence 4888999987652 1233343210 00122356666777778889999999999987
Q ss_pred CCCCceEEEeCC--EEecC-------------CCCCceEEcC-CCCceeEEEcCCCCCCCeeEEEEEEccccccee-cce
Q psy2441 139 NPPPKISWIREM--LPVDT-------------SRNPRYNLLT-SGAPGALQITNSIEEDQGKYECVAENEVGTEYS-PST 201 (212)
Q Consensus 139 ~p~~~i~W~~~~--~~~~~-------------~~~~~~~~~~-~~~~~~l~i~~~~~~d~g~y~C~a~n~~g~~~~-~~~ 201 (212)
. .+.+.|+++. ..... ....++.... ......|.|.++..+|+|.|.|.|.|..|...- ...
T Consensus 164 ~-~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~~g~~~fG~gt 242 (256)
T 3tf7_C 164 S-HNYMYWYRQDTGHELRLIYYSYGAGNLQIGDVPDGYKATRTTQEDFFLTLESASPSQTSLYFCASSDAPGQLYFGEGS 242 (256)
T ss_dssp C-CSEEEEEEECTTSCEEEEEEEESTTCCEECSCCTTCEEECCSSSBCEEEESSCCGGGCEEEEEEEEEETTEEEECCCE
T ss_pred C-ceEEEEEEECCCCCeEEEEEEcCCCceecCccCCceEEEeCCCCeEEEEECCCCHHHCEEEEEEecCCCCccEECCCe
Confidence 6 6799999832 11100 0123333332 222468999999999999999999997654322 224
Q ss_pred EEEEec
Q psy2441 202 MLYVKG 207 (212)
Q Consensus 202 ~l~v~~ 207 (212)
.|.|..
T Consensus 243 ~l~v~~ 248 (256)
T 3tf7_C 243 KLTVLE 248 (256)
T ss_dssp EEEEEC
T ss_pred EEEEEc
Confidence 555554
No 157
>1hzh_H IGG, immunoglobulin heavy chain; antibody, immune system; HET: NAG BMA MAN GAL FUC; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2 PDB: 2ig2_H 1mco_H*
Probab=99.76 E-value=1.7e-17 Score=127.79 Aligned_cols=190 Identities=17% Similarity=0.216 Sum_probs=109.0
Q ss_pred ceeeEEEeeccCC---------C--cceecccccCC----CCCeEEeCCCccEEeeCCeEEEEcccCCC-CC-CcEEEEe
Q psy2441 3 IGTYIKIKPNLFS---------P--LSVYSADKIPP----GFPQITEAPSTKVVEISHTTVLHCSASGN-PP-PKISWIR 65 (212)
Q Consensus 3 ~g~Y~C~~~~~~~---------~--~~~~~~~~~~~----~~p~~~~~~~~~~v~~g~~v~l~C~~~~~-p~-~~v~W~k 65 (212)
+|.|+|.+.|..+ . .......+.+. .+|.+...+....+.+|+.+.|.|.+.+. |. +.|.|+|
T Consensus 91 ~G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~k 170 (457)
T 1hzh_H 91 TAVYYCARVGPYSWDDSPQDNYYMDVWGKGTTVIVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNS 170 (457)
T ss_dssp CEEEEEEECCCCCSSCCTTTTCSCCBCCCCEEEEECSCCCBCCEEEEECCCSCCCTTCCEEEEEEEESBBSCCCEEEETT
T ss_pred CEEEEEEEecCCccccccccccccceECCcEEEEecCCCCCCCeEEecCccccccCCCcEEEEEEEeEEeCCCeEEEEEe
Confidence 5899999998764 0 11111222222 35666544444456899999999999876 64 7899999
Q ss_pred CCEEecC-------CCCCe------eEEeec--CCCCeEEEeeeCCccceeEEeecCCC----------------CCCCc
Q psy2441 66 EMLPVDT-------SRNPR------YNLLTS--GAPGTYIKIKPNLFSPLSVYSADKIP----------------PGFPQ 114 (212)
Q Consensus 66 ~g~~l~~-------~~~~~------~~~~~~--~~~g~~l~i~~~~~~~~~v~~~~~~~----------------~~~p~ 114 (212)
++..+.. ....+ +.+... +| |.|.|...+......+....... ...|.
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d-G~Y~C~a~n~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~p~ 249 (457)
T 1hzh_H 171 GALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKKAEPKSCDKTHTCPPCPAPELLGGPS 249 (457)
T ss_dssp TTBCTTEEEEEEEECTTSCEEEEEEEEECSGGGGT-SCCEEEEEEGGGTEEEEEECCCCCSCSSCSCCSCCCCCCSSSCE
T ss_pred CCEeccceEcCceECCCCCEEEEEEEEecccccCC-ceEEEEEEeCCCCcceeEEecccCCCcccccCCCCCccccCCce
Confidence 9854321 01122 223222 35 89999887733322111111100 01233
Q ss_pred c-ccCCccee-EecCCcEEEEEeeeeCCCC----ceEEEeCCEEecCCCCCceEEcCCCCceeEEEc---CCCCCC---C
Q psy2441 115 I-TEAPSTKV-VEISHTTVLHCSASGNPPP----KISWIREMLPVDTSRNPRYNLLTSGAPGALQIT---NSIEED---Q 182 (212)
Q Consensus 115 ~-~~~~~~~~-~~~g~~~~l~C~~~~~p~~----~i~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~---~~~~~d---~ 182 (212)
+ ...+.... +.+|+.+.|.|.+.+.|++ .+.|++++..+............+ +.+.+. .+...| .
T Consensus 250 v~~~~p~~~~~~~~G~~v~L~C~~~g~~p~p~~~~i~W~k~~~~~~~~~~~~~~~~~~---g~~~~~~~l~i~~~d~~d~ 326 (457)
T 1hzh_H 250 VFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYN---STYRVVSVLTVLHQDWLNG 326 (457)
T ss_dssp EEEECCCHHHHHCTTSCCCEEEEEECCCTTCCCCEEEEEETTEEECCCEEEEEEECTT---SCEEEEEEECCCHHHHHHT
T ss_pred EEeECcCchhhcccCCceEEEEEEEcccCCCCceEEEEEeCCccccccccccceecCC---CcEEEEEEEEECHHHccCC
Confidence 3 22232222 5679999999999987653 999999998875421011111222 233322 234445 9
Q ss_pred eeEEEEEEcccccc
Q psy2441 183 GKYECVAENEVGTE 196 (212)
Q Consensus 183 g~y~C~a~n~~g~~ 196 (212)
|.|.|.|.|..+..
T Consensus 327 G~Y~C~a~n~~~~~ 340 (457)
T 1hzh_H 327 KEYKCKVSNKALPA 340 (457)
T ss_dssp CCEEEEEECTTSSS
T ss_pred CcEEEEEeCCCCCC
Confidence 99999999875543
No 158
>4fmk_A Poliovirus receptor-related protein 2; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA MAN FUC; 2.56A {Mus musculus} PDB: 4fn0_A* 4fs0_A*
Probab=99.75 E-value=1.7e-17 Score=115.53 Aligned_cols=167 Identities=16% Similarity=0.167 Sum_probs=100.6
Q ss_pred CCccEEeeCCeEEEEcccCCCCCC---cEEEEeCCEEecC--------------------------------CCCCeeEE
Q psy2441 36 PSTKVVEISHTTVLHCSASGNPPP---KISWIREMLPVDT--------------------------------SRNPRYNL 80 (212)
Q Consensus 36 ~~~~~v~~g~~v~l~C~~~~~p~~---~v~W~k~g~~l~~--------------------------------~~~~~~~~ 80 (212)
|.++.+.+|++++|.|.+.+.+.+ .|.|+|++..+.. ..+..+.|
T Consensus 8 p~~V~~~~G~~v~L~C~~~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sL~I 87 (225)
T 4fmk_A 8 LPEVRGRLGGTVELPCHLLPPTTERVSQVTWQRLDGTVVAAFHPSFGVDFPNSQFSKDRLSFVRARPETNADLRDATLAF 87 (225)
T ss_dssp CSEEEEETTSCEEECCEECSSCCCEEEEEEEECTTSCEEEEEETTTEEECCCTTSCTTTEEECCCSCSCCSSCCBCCEEE
T ss_pred CCEEEEecCCCEEEEEEEECCCCCceeEEEEEECCCcceEEEecccceeeccccccccceeeeccccccccccCcEEEEE
Confidence 345678899999999999887665 4899997643210 00112333
Q ss_pred eec--CCCCeEEEeeeCCcc--ceeE-EeecCCCCCCCccccCCcceeEecCCcEEEEEee-eeCCCCceEEEeCCEEec
Q psy2441 81 LTS--GAPGTYIKIKPNLFS--PLSV-YSADKIPPGFPQITEAPSTKVVEISHTTVLHCSA-SGNPPPKISWIREMLPVD 154 (212)
Q Consensus 81 ~~~--~~~g~~l~i~~~~~~--~~~v-~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~-~~~p~~~i~W~~~~~~~~ 154 (212)
... +|.|.|.|....... .... ...... +|.....+.......++.+.+.|.+ .+.|++.+.|++++....
T Consensus 88 ~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~c~~~~~~P~~~~~w~~~~~~~~ 164 (225)
T 4fmk_A 88 RGLRVEDEGNYTCEFATFPNGTRRGVTWLRVIA---QPENHAEAQEVTIGPQSVAVARCVSTGGRPPARITWISSLGGEA 164 (225)
T ss_dssp CSCCGGGCEEEEEEEEEETTEEEEEEEEEEEEB---CCEEEEEECCBCCSSSCEEEEEEEEEEEBSCCEEEEECSSCCEE
T ss_pred ccCCHHHCcceEEEEEeCCCcceeeeeeeeeec---CCceeecccceeecceeeeeeeeeecCCCCCCEEEEEECCcccc
Confidence 332 478888887654111 1111 111111 1333333333344556777777765 567888999998875544
Q ss_pred CCCCCceEEcCCCC---ceeEEEcCCCCCCCeeEEEEEEcccccceecceEEEEecc
Q psy2441 155 TSRNPRYNLLTSGA---PGALQITNSIEEDQGKYECVAENEVGTEYSPSTMLYVKGT 208 (212)
Q Consensus 155 ~~~~~~~~~~~~~~---~~~l~i~~~~~~d~g~y~C~a~n~~g~~~~~~~~l~v~~~ 208 (212)
.. .......++. .+.|.|.++..+|+|.|+|.|.|..|..... ..+.+.+.
T Consensus 165 ~~--~~~~~~~~~~~~~~s~L~i~~~~~~d~g~YtC~a~N~~~~~~~~-~~v~l~V~ 218 (225)
T 4fmk_A 165 KD--TQEPGIQAGTVTIISRYSLVPVGRADGVKVTCRVEHESFEEPIL-LPVTLSVR 218 (225)
T ss_dssp EE--EEEECSSTTCEEEEEEEEECCCGGGTTCEEEEEEECTTCSSCEE-EEEECCBT
T ss_pred CC--cceEEecCCCEEEEEEEEEeeCCHHHCCEEEEEEEcCCCCeEEE-EEEEEEEE
Confidence 32 1111111211 2579999999999999999999998877655 56665554
No 159
>3s96_B 3B5H10 FAB light chain; huntingtin, immune system; 1.90A {Mus musculus} PDB: 2qhr_L 3ffd_B 4dcq_A
Probab=99.75 E-value=8.3e-18 Score=116.98 Aligned_cols=164 Identities=15% Similarity=0.257 Sum_probs=100.7
Q ss_pred CeEEeCCCccEEeeCCeEEEEcccCCC-CCCcEEEEeC---CE-------------EecCCCCCeeEEe-----------
Q psy2441 30 PQITEAPSTKVVEISHTTVLHCSASGN-PPPKISWIRE---ML-------------PVDTSRNPRYNLL----------- 81 (212)
Q Consensus 30 p~~~~~~~~~~v~~g~~v~l~C~~~~~-p~~~v~W~k~---g~-------------~l~~~~~~~~~~~----------- 81 (212)
|.+...+ .+.+.+|+++.|.|.+.+. |.+.+.|||. +. ........|+.+.
T Consensus 2 ~~v~~~p-~~~v~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~ 80 (218)
T 3s96_B 2 LVLTQSS-SASFSLGASAKLTCTLNSQHSTYTIEWYQQQPLKPPKYVMELKKDGSHSTGDGIPDRFSGSSSGADRYLSIS 80 (218)
T ss_dssp CSEECCS-EEEEETTSCEEEEEEECGGGTTCCEEEEEECTTSCCEEEEEECTTSCEEECSSCCTTEEEEEETTEEEEEES
T ss_pred CeEEeCC-cEEECCCCcEEEEEECCCCCCCcEEEEEEECCCCCeEEEEEEcccCccccCCCcccceEEecCCceEEEEEc
Confidence 4455666 7889999999999999888 8889999993 11 0111111244322
Q ss_pred ec--CCCCeEEEeeeCCc-----------cceeEEeecCCCCCCCccccCCcceeEecCCcEEEEEeeee-CCCC-ceEE
Q psy2441 82 TS--GAPGTYIKIKPNLF-----------SPLSVYSADKIPPGFPQITEAPSTKVVEISHTTVLHCSASG-NPPP-KISW 146 (212)
Q Consensus 82 ~~--~~~g~~l~i~~~~~-----------~~~~v~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~-~p~~-~i~W 146 (212)
.. .|.|.|.|...... ..+.|... +..+|.+...+....+..|+.+.|.|.+.+ .|.+ .+.|
T Consensus 81 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~---~~~~P~~~~~~~~~~~~~~~~v~L~C~~~g~~p~~~~v~W 157 (218)
T 3s96_B 81 NIQPEDEAIYICGVGDTIKEQFVYVFGGGTKVTVLGQ---PKSTPTLTVFPPSSEELKENKATLVCLISNFSPSGVTVAW 157 (218)
T ss_dssp SCCGGGCEEEEEEEEEEETTEEEEEECCCEEEEEESC---CCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCCEEEE
T ss_pred cCCcccCEEEEEEEecCCCCceeEEEcCcEEEEEecC---CCCCceEEeeCCCcccccCCcEEEEEEECcccCCCeEEEE
Confidence 21 38888888765422 23334321 112355554333333446789999999988 5666 8999
Q ss_pred EeCCEEecCCCCCceEEcCCCC---ceeEEEcCCCCCCCeeEEEEEEcccccce
Q psy2441 147 IREMLPVDTSRNPRYNLLTSGA---PGALQITNSIEEDQGKYECVAENEVGTEY 197 (212)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~---~~~l~i~~~~~~d~g~y~C~a~n~~g~~~ 197 (212)
++++..+............++. .+.|.|.....+|.|.|+|.|.|..+...
T Consensus 158 ~k~g~~l~~~~~~~~~~~~~~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~ 211 (218)
T 3s96_B 158 KANGTPITQGVDTSNPTKEGNKFMASSFLHLTSDQWRSHNSFTCQVTHEGDTVE 211 (218)
T ss_dssp EETTEEC--------------CEEEEEEEEEEHHHHHTCSCEEEEEEETTEEEE
T ss_pred EECCEECcCceecCcccccCCcEEEEEEEEEeHHHccCCCeEEEEEEeCCCccc
Confidence 9999988653111000111111 14477888888889999999999877554
No 160
>3gkz_A Anti-methamphetamine single chain FV; therapeutic antibody, MDMA, IGG, immune system; HET: B40; 1.90A {Mus musculus} PDB: 3gm0_A* 1rvf_L 3ab0_C 2a0l_C 3iy5_A
Probab=99.75 E-value=2.2e-16 Score=112.67 Aligned_cols=175 Identities=21% Similarity=0.270 Sum_probs=109.6
Q ss_pred eCCCccEEeeCCeEEEEcccCCC--CCCcEEEEeCC-----EEe-----------cCCCCCeeEEe-------------e
Q psy2441 34 EAPSTKVVEISHTTVLHCSASGN--PPPKISWIREM-----LPV-----------DTSRNPRYNLL-------------T 82 (212)
Q Consensus 34 ~~~~~~~v~~g~~v~l~C~~~~~--p~~~v~W~k~g-----~~l-----------~~~~~~~~~~~-------------~ 82 (212)
..+....+.+|++++|.|.+.+. +.+.+.|||.. ..+ ......|+.+. .
T Consensus 13 ~~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~ 92 (257)
T 3gkz_A 13 QESGPSLVKPSQTLSLTCSVTGDSVTSGYWSWIRQFPGNKLDYMGYISYRGSTYYNPSLKSRISITRDTSKNQVYLQLKS 92 (257)
T ss_dssp EEECCSEECTTCCEEEEEEEEESCCSSCEEEEEEECTTSCEEEEEEEETTCCEEECTTTTTTEEEEEEGGGTEEEEEECS
T ss_pred ECCCCeEEcCCCcEEEEEEEEcccccceEEEEEEECCCCCcEEEEEEecCCcEEecccccccEEEEEecCCceEEEEECC
Confidence 45667789999999999999774 46789999932 111 00111333332 2
Q ss_pred c--CCCCeEEEeeeCC----------ccceeEEeecC-------CCCCCCccccCCcceeEecCCcEEEEEeeeeCCCC-
Q psy2441 83 S--GAPGTYIKIKPNL----------FSPLSVYSADK-------IPPGFPQITEAPSTKVVEISHTTVLHCSASGNPPP- 142 (212)
Q Consensus 83 ~--~~~g~~l~i~~~~----------~~~~~v~~~~~-------~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~- 142 (212)
. +|.|.|.|..... ...+.|..... .....+.+...+....+.+|+.+.|.|.+.+.+.+
T Consensus 93 v~~~DsG~Y~C~~~n~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C~~~~~~~~~ 172 (257)
T 3gkz_A 93 VSSEDTATYYCSYFDSDDYAMEYWGQGTSVTVSGGGGSGGGGSGGGGSQIVLTQSPAIMSASPGEKVTLTCSASSSVSSS 172 (257)
T ss_dssp CCGGGCEEEEEEEECTTCTTCEEECCCEEEEEC---------CTTCCCCCCEECSCSEEEECTTCCEEEEEEESSCCCGG
T ss_pred CChhhCEEEEEEEecCCCcceeEEcCCEEEeecCchhhcccccCCCccceEEEcCCceEEEeCCCcEEEEEEEccCccce
Confidence 2 3888888887653 11233332100 00112455556666788999999999999998887
Q ss_pred ceEEEeC--CEEecC----------CCCCceEEcCCCCceeEEEcCCCCCCCeeEEEEEEcccccceecceEEEEecc
Q psy2441 143 KISWIRE--MLPVDT----------SRNPRYNLLTSGAPGALQITNSIEEDQGKYECVAENEVGTEYSPSTMLYVKGT 208 (212)
Q Consensus 143 ~i~W~~~--~~~~~~----------~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~n~~g~~~~~~~~l~v~~~ 208 (212)
.+.|+++ +..... ....++.........+|.|.++..+|+|.|.|.|.|...........|.|...
T Consensus 173 ~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~fg~gt~l~v~~~ 250 (257)
T 3gkz_A 173 HLYWYQQKPGSSPKLWIYSTSNLASGVPARFSGSGSGTSYSLTISSMEAEDAASYFCHQWSSFPFTFGSGTKLEIKRA 250 (257)
T ss_dssp GEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSSCEECCCEEEEECCC
T ss_pred EEEEEEECCCCCcEEEEEEccccCCCcCCCEEEecCCCEEEEEECCCChHHCEEEEEEEccCCceEEcCCEEEEEEeC
Confidence 9999983 221110 01234443333334679999999999999999998865444444366777654
No 161
>2if7_A SLAM family member 6; NTB-A, homophilic receptor, immune system; 3.00A {Homo sapiens}
Probab=99.75 E-value=2.6e-17 Score=112.60 Aligned_cols=145 Identities=15% Similarity=0.180 Sum_probs=92.3
Q ss_pred CCCccEEeeCCeEEEEcccCC-CCCCcEEEEeCCEEec---CCC-------------CCeeEE--------eec--CCCC
Q psy2441 35 APSTKVVEISHTTVLHCSASG-NPPPKISWIREMLPVD---TSR-------------NPRYNL--------LTS--GAPG 87 (212)
Q Consensus 35 ~~~~~~v~~g~~v~l~C~~~~-~p~~~v~W~k~g~~l~---~~~-------------~~~~~~--------~~~--~~~g 87 (212)
.|..+.+.+|++++|.|.+.+ .+.+.|.|+|+|..+. ... ..|+.+ ... .|.|
T Consensus 4 ~p~~v~~~~G~~v~L~C~~~~~~~~~~v~W~~~~~~i~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~sL~I~~v~~~D~G 83 (193)
T 2if7_A 4 TPLMVNGILGESVTLPLEFPAGEKVNFITWLFNETSLAFIVPHETKSPEIHVTNPKQGKRLNFTQSYSLQLSNLKMEDTG 83 (193)
T ss_dssp CCEEEEEETTSCEEECCCCCCCSCCCEEEEEETTEEEEEEECCSSSCCEEEECCHHHHTTEEECTTCCEEECSCCGGGCE
T ss_pred CCeEEEEEecCeEEEeccCCCcccccEEEEEECCEEEEEEecccCCCCceeecCccccccEEECCCeEEEECCCCcccCc
Confidence 455678899999999999975 4556899999986542 100 013222 222 3788
Q ss_pred eEEEeeeCCc------cceeEEeecCCCCCCCccccCCcceeEecCC-cEEEEEeeeeC-CCCceEEEeCCEEecCCCCC
Q psy2441 88 TYIKIKPNLF------SPLSVYSADKIPPGFPQITEAPSTKVVEISH-TTVLHCSASGN-PPPKISWIREMLPVDTSRNP 159 (212)
Q Consensus 88 ~~l~i~~~~~------~~~~v~~~~~~~~~~p~~~~~~~~~~~~~g~-~~~l~C~~~~~-p~~~i~W~~~~~~~~~~~~~ 159 (212)
.|.|...... ..+.|+. ++..|.+.... .....|. .+.|.|.+.+. |.|.+.|++++..+...
T Consensus 84 ~Y~C~~~~~~~~~~~~~~L~V~~----~~~~p~i~~~~--~~~~~g~~~v~L~C~~~g~~p~p~i~W~~~g~~l~~~--- 154 (193)
T 2if7_A 84 SYRAQISTKTSAKLSSYTLRILR----QLRNIQVTNHS--QLFQNMTCELHLTCSVEDADDNVSFRWEALGNTLSSQ--- 154 (193)
T ss_dssp EEEEEEECSSCEEEEEEEEEEEC----CCEEEEEEECC--C---CSSEEEEEEEEEESCCTTCEEEEEETTEEEESS---
T ss_pred eEEEEEEecCCCeEEEEEEEEEc----cCCCCeEecCc--eeecCCCceEEEEEEEecCCCceEEEEEeCCEEcCCC---
Confidence 8888766522 2233322 11113333222 1233455 79999999985 57899999998766432
Q ss_pred ceEEcCCCCceeEEEcCCCCC-CCeeEEEEEEccccccee
Q psy2441 160 RYNLLTSGAPGALQITNSIEE-DQGKYECVAENEVGTEYS 198 (212)
Q Consensus 160 ~~~~~~~~~~~~l~i~~~~~~-d~g~y~C~a~n~~g~~~~ 198 (212)
..|.|.....+ |.|.|+|.|.|..|....
T Consensus 155 ----------~~l~i~~~~~~~d~G~Y~C~a~N~~g~~s~ 184 (193)
T 2if7_A 155 ----------PNLTVSWDPRISSEQDYTCIAENAVSNLSF 184 (193)
T ss_dssp ----------SEEEEEECTTTCSCCEEEEEEEETTEEEEE
T ss_pred ----------CeEEEEeccCcCCCCcEEEEEECCCCcccc
Confidence 45666544444 899999999999988743
No 162
>3esu_F Antibody 14B7* light chain and antibody 14B7* heavy chain linked with A synthetic...; single-chain FV, monoclonal antibody, immunoglobulin; 1.30A {Mus musculus} PDB: 3et9_F 3esv_F 3etb_F 1h8n_A 1h8s_A* 1h8o_A*
Probab=99.75 E-value=9.9e-17 Score=113.92 Aligned_cols=162 Identities=14% Similarity=0.230 Sum_probs=101.4
Q ss_pred CeEEeCCCccEEeeCCeEEEEcccCCCCCCcEEEEeCC-----EEec-------CCCCCee-----------EEeec--C
Q psy2441 30 PQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREM-----LPVD-------TSRNPRY-----------NLLTS--G 84 (212)
Q Consensus 30 p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~k~g-----~~l~-------~~~~~~~-----------~~~~~--~ 84 (212)
+.+...|..+.+.+|+.++|.|.+.+.|.+.+.|||+. ..+. .....|+ .|... +
T Consensus 5 ~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~i~W~k~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~ 84 (250)
T 3esu_F 5 IVLIQSTSSLSASLGDRVTISCRASQDIRNYLNWYQQKPDGTVKLLIYYTSRLQSGVPSRFSGSGSGTDYSLTISNLEQE 84 (250)
T ss_dssp CCEECSCSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGG
T ss_pred eeEEecCCEEEeeCCCcEEEEEEecccCCceEEEEEECCCCCCEEEEEEeCCCCCCCCCCEEEeCCCCEEEEEEccCChh
Confidence 45566777888999999999999999999999999952 1110 0011233 22222 3
Q ss_pred CCCeEEEeeeCC-------ccceeEEeecCC------------CCCCCccccCCcceeEecCCcEEEEEeeeeCC--CCc
Q psy2441 85 APGTYIKIKPNL-------FSPLSVYSADKI------------PPGFPQITEAPSTKVVEISHTTVLHCSASGNP--PPK 143 (212)
Q Consensus 85 ~~g~~l~i~~~~-------~~~~~v~~~~~~------------~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p--~~~ 143 (212)
|.|.|.|..... ...+.|...... ...++.+...+....+.+|+.+.|.|.+.+.+ .+.
T Consensus 85 D~G~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~ 164 (250)
T 3esu_F 85 DIGTYFCQQGNTLPWTFGGGTKLEIRRGGGGSGGGGSGGGGSGGGGSEVQLQQSGPELVKPGASVKISCKDSGYAFSSSW 164 (250)
T ss_dssp GCEEEEEEECSSSSCEECCCEEEEEC------------------------CEECCCEEECTTCCEEEEEECCSTTGGGSE
T ss_pred hCEEEEEEEeeCCCceECCCEEEEEECCCCcccccccccccccCcccceEEecCCceEEcCCceEEEEEEecCCcccCCE
Confidence 888888887652 122333321000 00112233344556788999999999998877 689
Q ss_pred eEEEeC--CEEecC---------------CCCCceEEcCC--CCceeEEEcCCCCCCCeeEEEEEEc
Q psy2441 144 ISWIRE--MLPVDT---------------SRNPRYNLLTS--GAPGALQITNSIEEDQGKYECVAEN 191 (212)
Q Consensus 144 i~W~~~--~~~~~~---------------~~~~~~~~~~~--~~~~~l~i~~~~~~d~g~y~C~a~n 191 (212)
+.|+++ +..+.. ....++....+ ....+|.|.++..+|+|.|.|.+.|
T Consensus 165 v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~ 231 (250)
T 3esu_F 165 MNWVKQRPGQGPEWIGRIYPGDGDTNYNGKFKGKATLTADKSSSTAYMQLSSLTSVDSAVYFCARSG 231 (250)
T ss_dssp EEEEEECTTSCCEEEEEEETTTTEEEECGGGTTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEEC
T ss_pred EEEEEECCCCCcEEEEEEeccCCccccCccccceEEEEecCCCCeEEEEECCCCcccCEEEEEEEec
Confidence 999986 322210 01234444322 2235799999999999999999997
No 163
>3ejj_X Macrophage colony-stimulating factor 1 receptor; growth factor-receptor complex, receptor tyrosine kinase, CY 4-helix bundle, ATP-binding; HET: NAG; 2.40A {Mus musculus} PDB: 4exp_X*
Probab=99.75 E-value=9.9e-17 Score=116.07 Aligned_cols=168 Identities=19% Similarity=0.180 Sum_probs=113.6
Q ss_pred CCCeEEeCCCccEEeeCCeEEEEcccCCCCCCcEEEEeCCEEec----CCCCCeeEEeec--CCCCeEEEeeeCC--ccc
Q psy2441 28 GFPQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREMLPVD----TSRNPRYNLLTS--GAPGTYIKIKPNL--FSP 99 (212)
Q Consensus 28 ~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~k~g~~l~----~~~~~~~~~~~~--~~~g~~l~i~~~~--~~~ 99 (212)
.+|.+...+....+.+|+.+.|.|.+.+ .+.|++++.... ......+.+... +|.|.|.|..... ...
T Consensus 3 p~p~i~~~~~~~~v~~G~~v~L~C~~~~----~v~W~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~ 78 (289)
T 3ejj_X 3 PAPVIEPSGPELVVEPGETVTLRCVSNG----SVEWDGPISPYWTLDPESPGSTLTTRNATFKNTGTYRCTELEDPMAGS 78 (289)
T ss_dssp -CCEEESCSSEEEECTTCCEEEEEECSS----CCEEECSCSSSSEECCCSSCCEEEESSCCGGGCEEEEEECCC-----C
T ss_pred CCcEecCCCceEEECCCCCEEEEEEeCC----cEEEccCCCceEEEeccCCccEEEEeeeccccCEEEEEEEeccCCcce
Confidence 3566667777888999999999999977 499999864321 111234444443 4889999986541 112
Q ss_pred eeEEeecCCCCCCCccccCCcceeEecCCcEEEEEeeeeCCCCc-eEEEe-CCEEecCCCCCceEEcCCCCceeEEEcCC
Q psy2441 100 LSVYSADKIPPGFPQITEAPSTKVVEISHTTVLHCSASGNPPPK-ISWIR-EMLPVDTSRNPRYNLLTSGAPGALQITNS 177 (212)
Q Consensus 100 ~~v~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~-i~W~~-~~~~~~~~~~~~~~~~~~~~~~~l~i~~~ 177 (212)
..+...+..++ ..+...+....+.+|+.+.|.|.+.+.+.+. +.|++ ++..+... .++....+ ..|.|.++
T Consensus 79 ~~~~l~V~~~~--~~~~~~~~~~~v~~g~~v~L~C~~~~~~~~~~v~W~~~~~~~~~~~--~~~~~~~~---~~L~i~~v 151 (289)
T 3ejj_X 79 TTIHLYVKDPA--HSWNLLAQEVTVVEGQEAVLPCLITDPALKDSVSLMREGGRQVLRK--TVYFFSPW---RGFIIRKA 151 (289)
T ss_dssp EEEEEEECCSS--CSEEESCSEEEEETTSCEEECEEESCGGGGGSEEEEEGGGEECCTT--CCEEEETT---TEEEESSC
T ss_pred eEEEEEEeCCC--cceecccceEEEecCCceEeEEEccCCCcceEEEEEecCCeecCCC--ccEEECCC---CCEEEeec
Confidence 22222222221 1144455667889999999999999877765 99986 56555443 55555555 68999999
Q ss_pred CCCCCeeEEEEEE-cccccceecceEEEEec
Q psy2441 178 IEEDQGKYECVAE-NEVGTEYSPSTMLYVKG 207 (212)
Q Consensus 178 ~~~d~g~y~C~a~-n~~g~~~~~~~~l~v~~ 207 (212)
..+|.|.|.|.+. |..+..... +.|.|..
T Consensus 152 ~~~d~G~Y~C~a~~~~~~~~~~~-~~l~V~~ 181 (289)
T 3ejj_X 152 KVLDSNTYVCKTMVNGRESTSTG-IWLKVNR 181 (289)
T ss_dssp CGGGCEEEEEEEEETTEEEECCC-EEEEEES
T ss_pred ccccCEEEEEEEEeCCCcccccc-EEEEEEE
Confidence 9999999999999 555555445 7777763
No 164
>1igy_B IGG1 intact antibody MAB61.1.3; intact immunoglobulin, V region, C region, hinge region, immunoglobulin; HET: NAG FUL NDG BMA MAN GAL FUC; 3.20A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=99.74 E-value=1.9e-19 Score=137.73 Aligned_cols=192 Identities=14% Similarity=0.162 Sum_probs=114.4
Q ss_pred ceeeEEEeeccCCCcceecccccC----CCCCeEEeCCCccEEeeCCeEEEEcccCCC-CCC-cEEEEeCCEEecCC---
Q psy2441 3 IGTYIKIKPNLFSPLSVYSADKIP----PGFPQITEAPSTKVVEISHTTVLHCSASGN-PPP-KISWIREMLPVDTS--- 73 (212)
Q Consensus 3 ~g~Y~C~~~~~~~~~~~~~~~~~~----~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~-p~~-~v~W~k~g~~l~~~--- 73 (212)
+|.|+|.+.|..+..... ..+.+ ..+|.+...+....+.+|+.+.|.|.+.+. |.+ .|.|+|++..+...
T Consensus 90 ~G~Y~C~~~~~~~~~~~~-~~l~V~~~~~~~P~i~~~~~~~~~~~G~~v~L~C~~~g~~P~p~~v~W~k~~~~~~~~~~~ 168 (434)
T 1igy_B 90 SAVYYCVREGEVPYWGQG-TTVTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFP 168 (434)
T ss_dssp CSEECCCCSSSSCCCCCC-EECEECCSCCBCCCEEEECCCCCCCCTTEEEEEEEEEEEBSSCCEEEETTTTBCSSEEECC
T ss_pred CEEEEEEEEccccccCCc-eEEEEccCCCCCCeEEEcCCccccCCCCcEEEEEEEeeecCCCeEEEEeeCCcCCCeEecC
Confidence 589999999854322211 22222 235655533333345789999999999875 666 89999998653100
Q ss_pred ---CCCe------eEEeec--CCCCeEEEeeeCCccc--eeEEeecCC---------CCCCCcccc-CCccee-EecCCc
Q psy2441 74 ---RNPR------YNLLTS--GAPGTYIKIKPNLFSP--LSVYSADKI---------PPGFPQITE-APSTKV-VEISHT 129 (212)
Q Consensus 74 ---~~~~------~~~~~~--~~~g~~l~i~~~~~~~--~~v~~~~~~---------~~~~p~~~~-~~~~~~-~~~g~~ 129 (212)
.... +.+... +| |.|.|...+.... ......... ....|.+.. .+.... +.+|+.
T Consensus 169 ~~~~~~~~~~~s~L~i~~~~~~d-g~Y~C~a~n~~~~~~~~~~~~~~~~~~~v~~~~~~~~p~v~~~~p~~~~~v~~G~~ 247 (434)
T 1igy_B 169 AVLQSDLYTLSSSVTVPSSPRPS-ETVTCNVAHPASSTKVDKKIVPRDCGCKPCICTVPEVSSVFIFPPKPKDTLLITVT 247 (434)
T ss_dssp CEECSSCEEEEEEEEEETTTTTS-SCCEEEEECTTTTCCEEEECCCCCCCCCCCCCCCSSSCCEEEECCCHHHHHSTTSC
T ss_pred ceecCCcEEEEEEEEEcchhcCC-CcEEEEEEeCCCCccceeeccCCCCCCccccCCCCcCcEEEEeCCChHHhcccCCC
Confidence 0011 223222 25 8999988774333 222111000 001133322 222222 778999
Q ss_pred EEEEEeeeeCC----CCceEEEeCCEEecCCCCCceEEcCCC---CceeEEEcCCCCCCCeeEEEEEEcccccc
Q psy2441 130 TVLHCSASGNP----PPKISWIREMLPVDTSRNPRYNLLTSG---APGALQITNSIEEDQGKYECVAENEVGTE 196 (212)
Q Consensus 130 ~~l~C~~~~~p----~~~i~W~~~~~~~~~~~~~~~~~~~~~---~~~~l~i~~~~~~d~g~y~C~a~n~~g~~ 196 (212)
+.|.|.+.+.+ .+.|.|++++..+............++ ..+.|.|.++..+|.|.|.|.|.|..|..
T Consensus 248 ~~L~C~~~g~~p~P~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~ 321 (434)
T 1igy_B 248 PKVTCVVVDISKDDPEVQFSWFVDNVEVHTAQTQPREEQFNSTFRVVSALPIMHQDWLNGKEFKCRVNSAAFPA 321 (434)
T ss_dssp CEEEEEECCCCSSCCCCCBCBBSSSCCBCCCSCCCCCCCCSSSCCCCCCEECCHHHHHHTCCCBCCBCCSSCSS
T ss_pred cEEEEEEeccccCCCCeEEEEEeCCcccCCcccCcceeCCCCcEEEEEEEEECHHHccCCCcEEEEEECCCCCC
Confidence 99999999874 358999999877653211111001111 13579999999999999999999988865
No 165
>3qp3_A Titin; I-SET IG-like, sarcomere, M-BAND, transferase; 2.00A {Homo sapiens}
Probab=99.74 E-value=2.1e-17 Score=101.46 Aligned_cols=93 Identities=20% Similarity=0.328 Sum_probs=79.4
Q ss_pred CccccCCcceeEecCCcEEEEEeeeeCCCCceEEEeCCEEecCCCCCceEEcCCCCceeEEEcCCCCCCCeeEEEEEEcc
Q psy2441 113 PQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREMLPVDTSRNPRYNLLTSGAPGALQITNSIEEDQGKYECVAENE 192 (212)
Q Consensus 113 p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~n~ 192 (212)
|.+...+....+.+|+.+.|.|.+.+.|.|.+.|++++..+... .++....+.....|.|.++..+|+|.|.|.|.|.
T Consensus 9 P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~i~W~k~~~~~~~~--~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~N~ 86 (103)
T 3qp3_A 9 PRITLRMRSHRVPCGQNTRFILNVQSKPTAEVKWYHNGVELQES--SKIHYTNTSGVLTLEILDCHTDDSGTYRAVCTNY 86 (103)
T ss_dssp EEEEECCCCEEEETTCCEEEEEEEEEESCCEEEEEETTEECCCC--SSEEEEEETTEEEEEECSCCGGGCEEEEEEEEET
T ss_pred CEEEeCCcceEEeCCCeEEEEEEEEecCCCEEEEEECCEECCCC--CCEEEEECCCEEEEEEcCCCcccCEEEEEEEEeC
Confidence 67777777788999999999999999999999999999988765 4555554444468999999999999999999999
Q ss_pred cccceecceEEEEecc
Q psy2441 193 VGTEYSPSTMLYVKGT 208 (212)
Q Consensus 193 ~g~~~~~~~~l~v~~~ 208 (212)
.|..... +.|.|++.
T Consensus 87 ~G~~~~~-~~l~V~~~ 101 (103)
T 3qp3_A 87 KGEASDY-ATLDVTGG 101 (103)
T ss_dssp TEEEEEE-EEEEEECC
T ss_pred CCcEEEE-EEEEEECC
Confidence 9999777 88888764
No 166
>3pv7_A B7-H6, IG-like domain-containing protein DKFZP686O24166/DKFZP686I21167; NK cell receptor, receptor-ligand complex, immune system; HET: NAG; 2.00A {Homo sapiens} PDB: 3pv6_A*
Probab=99.74 E-value=2.3e-17 Score=117.02 Aligned_cols=165 Identities=17% Similarity=0.224 Sum_probs=94.6
Q ss_pred eCCCccEEeeCCeEEEEcccCCCCCCc-----EEEEeCCEEec-----------------CC----------CCCeeEEe
Q psy2441 34 EAPSTKVVEISHTTVLHCSASGNPPPK-----ISWIREMLPVD-----------------TS----------RNPRYNLL 81 (212)
Q Consensus 34 ~~~~~~~v~~g~~v~l~C~~~~~p~~~-----v~W~k~g~~l~-----------------~~----------~~~~~~~~ 81 (212)
..+..+.+.+|+++.|.|.+.+.|.+. |.|+|++.... .. ....+.+.
T Consensus 8 ~~p~~~~v~~G~~v~L~C~~~g~p~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sL~I~ 87 (248)
T 3pv7_A 8 MAGGTQITPLNDNVTIFCNIFYSQPLNITSMGITWFWKSLTFDKEVKVFEFFGDHQEAFRPGAIVSPWRLKSGDASLRLP 87 (248)
T ss_dssp STTSEEEEETTSCEEECCEEEESSCCCTTSCEEEEEEECSSCCCEEEEEEEESSCEEESSTTCBCCHHHHTTTBCCEEES
T ss_pred eCCCCeEEeCCCCEEEeeEEecCCCcCCCceEEEEEEEcCCCCcceEEEEecCCcccccCCceEEEeccCCCCcEEEEeC
Confidence 345567889999999999998777665 99999632111 00 00113443
Q ss_pred ec--CCCCeEEEeeeCCc------cceeEEeecCCCCCCCccccCCcceeEecCCcEEEEEeeee-CCCC-ceEEEeCCE
Q psy2441 82 TS--GAPGTYIKIKPNLF------SPLSVYSADKIPPGFPQITEAPSTKVVEISHTTVLHCSASG-NPPP-KISWIREML 151 (212)
Q Consensus 82 ~~--~~~g~~l~i~~~~~------~~~~v~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~-~p~~-~i~W~~~~~ 151 (212)
.. .|.|.|.|...... ..+.|.. +|.+...+... +..|+.+.|.|.+.+ .|.+ .+.|++++.
T Consensus 88 ~v~~~D~G~Y~C~~~~~~~~~~~~~~L~V~~-------~P~v~~~~~~~-~~~~~~~~L~C~~~g~~P~pi~v~W~k~g~ 159 (248)
T 3pv7_A 88 GIQLEEAGEYRCEVVVTPLKAQGTVQLEVVA-------SPASRLLLDQV-GMKENEDKYMCESSGFYPEAINITWEKQTQ 159 (248)
T ss_dssp SCCGGGCEEEEEEEEETTEEEEEEEEEEEEB-------CCEEEEECC---------CEEEEEEEEEBSSCCEEEEEEECS
T ss_pred CCCHHHCeEEEEEEEeCCccceeEEEEEEec-------CCceEEecCCc-cccCCCcEEEEEEccEECCCeEEEEEECCc
Confidence 33 48899999876522 2333332 25555444332 345778889999998 8888 999999886
Q ss_pred EecCC---CC----CceEEcCCCC---ceeEEEcCCCCCCCeeEEEEEEcccccceec-ceEEEEe
Q psy2441 152 PVDTS---RN----PRYNLLTSGA---PGALQITNSIEEDQGKYECVAENEVGTEYSP-STMLYVK 206 (212)
Q Consensus 152 ~~~~~---~~----~~~~~~~~~~---~~~l~i~~~~~~d~g~y~C~a~n~~g~~~~~-~~~l~v~ 206 (212)
.+... .. .......++. ...|.+.....+|.|.|+|.|.|..+..... .+.|.|.
T Consensus 160 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~YtC~a~n~~~~~~~~~~v~l~V~ 225 (248)
T 3pv7_A 160 KFPHPIEISEDVITGPTIKNMDGTFNVTSCLKLNSSQEDPGTVYQCVVRHASLHTPLRSNFTLTAA 225 (248)
T ss_dssp SSCSCEEECTTEEEEEEEECTTSCEEEEEEEECC--CCCTTCEEEEEEECTTCSSCEEEEECC---
T ss_pred cCCCccccccceeecccEECCCCCEEEEEEEEEcCccccCCCEEEEEEECCCCCCCcEEEEEEEEc
Confidence 43321 00 0011111111 2578888888999999999999988764332 1444443
No 167
>3auv_A SC-DSFV derived from the G6-FAB; SC-DSFV (disulfide-stabilized SCFV), SCFV, monovalent antibo antibody engineering, immune system; 2.40A {Homo sapiens} PDB: 2kh2_B 3iy0_L
Probab=99.74 E-value=1.6e-16 Score=114.56 Aligned_cols=180 Identities=18% Similarity=0.232 Sum_probs=109.8
Q ss_pred CCCeEEeCCCccEEeeCCeEEEEcccCCCCCCcEEEEeCCE-----EecC-------CCCCeeEEe-----------ec-
Q psy2441 28 GFPQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREML-----PVDT-------SRNPRYNLL-----------TS- 83 (212)
Q Consensus 28 ~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~k~g~-----~l~~-------~~~~~~~~~-----------~~- 83 (212)
..+.+...|..+.+.+|++++|.|.+.+.|.+.+.|||++. .+.. ....|+.+. ..
T Consensus 11 ~~~~v~~~p~~~~v~~G~~v~L~C~~~~~p~~~i~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~ 90 (276)
T 3auv_A 11 GDIQMTQSPSSLSASVGDRVTITCRASQDVSTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSGSGTDFTLTISSLQ 90 (276)
T ss_dssp -CCCEEEECSEEECCTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCC
T ss_pred cceeEEeCCCeEEEcCCCCEEEEeEcCCCCCCcEEEEEECCCCCCEEEEEEcCccCCCCCCCEEEeccCCeEEEEEccCC
Confidence 45567777888899999999999999998888999999541 1210 012344332 11
Q ss_pred -CCCCeEEEeeeCCc-------cceeEEeecCC-------CCCCCccccCCcceeEecCCcEEEEEeeeeCC--CCceEE
Q psy2441 84 -GAPGTYIKIKPNLF-------SPLSVYSADKI-------PPGFPQITEAPSTKVVEISHTTVLHCSASGNP--PPKISW 146 (212)
Q Consensus 84 -~~~g~~l~i~~~~~-------~~~~v~~~~~~-------~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p--~~~i~W 146 (212)
.|.|.|.|...... ..+.|...... ...++.+...+....+.+|+.+.|.|.+.+.+ .+.+.|
T Consensus 91 ~~DsG~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~p~~~~~~p~~~~v~~G~~v~L~C~~~g~~~~~~~v~W 170 (276)
T 3auv_A 91 PEDFATYYCQQHYTTPPTFGCGTKVEIKGGGGGSIEGRSGGGGSEVQLVESGGGLVQPGGSLRLSCAASGFTISDYWIHW 170 (276)
T ss_dssp GGGCEEEEEEECSSSSCCCCCCEEEEC-----------------CCEEEEECCEEECTTCCEEEEEEEESSCGGGSEEEE
T ss_pred hhhCEEEEEEEecCCcccccCCEEEEEecCCCccccccccccCcceEEECCCceEecCCCeEEEEEEecCccCCCCEEEE
Confidence 37888888776521 22232221000 00011222334557788999999999999876 489999
Q ss_pred EeCC--EEec---------------CCCCCceEEcCC--CCceeEEEcCCCCCCCeeEEEEEEccc---c-cceecceEE
Q psy2441 147 IREM--LPVD---------------TSRNPRYNLLTS--GAPGALQITNSIEEDQGKYECVAENEV---G-TEYSPSTML 203 (212)
Q Consensus 147 ~~~~--~~~~---------------~~~~~~~~~~~~--~~~~~l~i~~~~~~d~g~y~C~a~n~~---g-~~~~~~~~l 203 (212)
++++ .... .....++....+ .....|.|.++..+|+|.|.|.|.|.. + ........|
T Consensus 171 ~k~~~g~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~~~~~~~~~fg~gt~l 250 (276)
T 3auv_A 171 VRQAPGKCLEWVAGITPAGGYTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARFVFFLPYAMDYWGQGTLV 250 (276)
T ss_dssp EEECTTCCEEEEEEECGGGCCEEECTTTTTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEECSSTTCSCCCBCCCEEE
T ss_pred EEcCCCCCcEEEEEEeccCCccccccccCCcEEEEecCCCcEEEEEECCCChhHCEEEEEEEEcCcCCcCceEECCCEEE
Confidence 9953 1110 111245544432 123589999999999999999999973 2 112222566
Q ss_pred EEec
Q psy2441 204 YVKG 207 (212)
Q Consensus 204 ~v~~ 207 (212)
.|..
T Consensus 251 ~V~~ 254 (276)
T 3auv_A 251 TVSS 254 (276)
T ss_dssp EEC-
T ss_pred EEcc
Confidence 6654
No 168
>2edj_A Roundabout homolog 2; KIAA1568 protein, beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.74 E-value=3.9e-17 Score=99.73 Aligned_cols=93 Identities=33% Similarity=0.623 Sum_probs=78.9
Q ss_pred CCCccccCCcceeEecCCcEEEEEeeeeCCCCceEEEeCCEEecCCCCCceEEcCCCCceeEEEcCCCCCCCeeEEEEEE
Q psy2441 111 GFPQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREMLPVDTSRNPRYNLLTSGAPGALQITNSIEEDQGKYECVAE 190 (212)
Q Consensus 111 ~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~ 190 (212)
.+|.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+... ..++....+ +.|.|.++..+|+|.|.|.|.
T Consensus 7 ~~P~i~~~p~~~~v~~G~~~~l~C~~~g~p~p~v~W~~~~~~~~~~-~~~~~~~~~---~~L~i~~v~~~d~G~Y~C~a~ 82 (100)
T 2edj_A 7 GPPIILQGPANQTLAVDGTALLKCKATGDPLPVISWLKEGFTFPGR-DPRATIQEQ---GTLQIKNLRISDTGTYTCVAT 82 (100)
T ss_dssp SSCEEEECCCCEEEESSSEEEECCEEECSSCCEEEEEESSSEESSS-CSSCEECTT---CCEEEESCCTTTCCEEEEEEE
T ss_pred CCCEEEeCcCCEEEcCCCcEEEEEEEEEcCCCEEEEEECCEECCCC-CCCEEEcCC---CEEEEccCCcccCEEEEEEEE
Confidence 4577777788888999999999999999999999999999888743 345555555 689999999999999999999
Q ss_pred cccccceecceEEEEecc
Q psy2441 191 NEVGTEYSPSTMLYVKGT 208 (212)
Q Consensus 191 n~~g~~~~~~~~l~v~~~ 208 (212)
|..|..... +.|.|.++
T Consensus 83 n~~g~~~~~-~~l~V~~~ 99 (100)
T 2edj_A 83 SSSGETSWS-AVLDVTES 99 (100)
T ss_dssp CSSCCCBCC-EEEEEESC
T ss_pred cCCCCEEEE-EEEEEecC
Confidence 999988777 88888764
No 169
>1u2h_A APEG-1, aortic preferentially expressed protein 1; structural genomics, IG-fold I-SET, RGD motif, homophilic adhesion, arterial smooth muscle cells; 0.96A {Homo sapiens}
Probab=99.74 E-value=2.4e-17 Score=100.50 Aligned_cols=93 Identities=27% Similarity=0.472 Sum_probs=77.3
Q ss_pred CccccCCcceeEecCCcEEEEEeeeeCCCCceEEEeCCEEecCCCCCceEEcCCCCceeEEEcCCCCCCCeeEEEEEEcc
Q psy2441 113 PQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREMLPVDTSRNPRYNLLTSGAPGALQITNSIEEDQGKYECVAENE 192 (212)
Q Consensus 113 p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~n~ 192 (212)
|.+...+....+.+|+.+.|.|.+.+.|.|.+.|++++..+... ..++....++...+|.|.++..+|+|.|.|.|.|.
T Consensus 6 P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~~~~~~~~-~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~N~ 84 (99)
T 1u2h_A 6 PTFKVSLMDQSVREGQDVIMSIRVQGEPKPVVSWLRNRQPVRPD-QRRFAEEAEGGLCRLRILAAERGDAGFYTCKAVNE 84 (99)
T ss_dssp EEEEECCCCEEEETTCCEEEEEEEEEESCCEEEEEETTEECCCB-TTEEEEECGGGEEEEEESSCCGGGCEEEEEEEEET
T ss_pred CEEEEcCCceEecCCCEEEEEEEEEEcCCCEEEEEECCEECCCC-CCEEEEECCCCEEEEEEccCCcCCCEEEEEEEEEC
Confidence 66667777788999999999999999999999999999988764 33444444433358999999999999999999999
Q ss_pred cccceecceEEEEec
Q psy2441 193 VGTEYSPSTMLYVKG 207 (212)
Q Consensus 193 ~g~~~~~~~~l~v~~ 207 (212)
.|..... +.|.|++
T Consensus 85 ~g~~~~~-~~l~V~~ 98 (99)
T 1u2h_A 85 YGARQCE-ARLEVRG 98 (99)
T ss_dssp TEEEEEE-EEEEEEC
T ss_pred CCceeEE-EEEEEEC
Confidence 9998877 8888765
No 170
>2oz4_A Intercellular adhesion molecule 1; IGSF domain, structural plasticity, cell-surface dimerizatio adhesion; HET: NAG FUC; 2.70A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 b.1.1.4 PDB: 1p53_A*
Probab=99.74 E-value=4.1e-17 Score=116.90 Aligned_cols=149 Identities=19% Similarity=0.311 Sum_probs=99.6
Q ss_pred cEEeeCCeEEEEcccCC-CCCC--cEEEEeCCEEecCC---CCCeeEEeec-----CCCC--eEEEeeeCC------ccc
Q psy2441 39 KVVEISHTTVLHCSASG-NPPP--KISWIREMLPVDTS---RNPRYNLLTS-----GAPG--TYIKIKPNL------FSP 99 (212)
Q Consensus 39 ~~v~~g~~v~l~C~~~~-~p~~--~v~W~k~g~~l~~~---~~~~~~~~~~-----~~~g--~~l~i~~~~------~~~ 99 (212)
..+.+|+.+.|.|.+.+ .|.+ .|.|+|+|..+... ....+.+... .|.| .|.|..... ...
T Consensus 13 ~~v~~G~~v~l~C~~~g~~p~p~~~v~W~k~~~~l~~~~~~~~~~~~~~~~~~~~~~d~g~g~Y~C~a~n~~~~~~~~~~ 92 (265)
T 2oz4_A 13 RVLEVDTQGTVVCSLDGLFPVSEAQVHLALGDQRLNPTVTYGNDSFSAKASVSVTAEDEGTQRLTCAVILGNQSQETLQT 92 (265)
T ss_dssp SEEETTEEEEEEEEEESCSCGGGCEEEEEETTEECCCEEEECSSEEEEEEEEEECGGGCEEEEEEEEEEETTEEEEEEEE
T ss_pred ceEecCCCEEEEEEccCCCCCcceEEEEEeCCEECCceEeeCCCeEEEEeecccccccCCcceEEEEEecCCCCcEEEEE
Confidence 37889999999999988 7766 89999999887532 1123333221 3556 488887763 233
Q ss_pred eeEEeecCCCCCCCccccCCcceeEecCCcEEEEEeeeeCCCCceEEEeCCEEecCCCCCceEEcCCCCceeEEEcCCCC
Q psy2441 100 LSVYSADKIPPGFPQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREMLPVDTSRNPRYNLLTSGAPGALQITNSIE 179 (212)
Q Consensus 100 ~~v~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~ 179 (212)
+.|+.. + +|.+. +....+.+|+.+.|.|.+. |.+.+.| ++..+... +....|.|..+..
T Consensus 93 l~V~~~---p--~p~~~--~~~~~v~~G~~v~l~C~~~--p~~~i~W--~g~~~~~~----------~~~~~l~i~~~~~ 151 (265)
T 2oz4_A 93 VTIYSF---P--APNVI--LTKPEVSEGTEVTVKCEAH--PRAKVTL--NGVPAQPL----------GPRAQLLLKATPE 151 (265)
T ss_dssp EEEECC---C--CCEEE--ESCSEEETTCEEEEEEECC--TTSEEEE--SSCSSSCC----------SSEECCEEECCGG
T ss_pred EEEeCC---C--Cceee--cCCceecCCCcEEEEEEcc--CCCEEEE--CCEEccCC----------CCcEEEEEccccc
Confidence 333321 1 13333 3445678899999999998 8899999 66655321 1126788998999
Q ss_pred CCCeeEEEEEEccc-cccee--cceEEEEecc
Q psy2441 180 EDQGKYECVAENEV-GTEYS--PSTMLYVKGT 208 (212)
Q Consensus 180 ~d~g~y~C~a~n~~-g~~~~--~~~~l~v~~~ 208 (212)
+|.|.|.|.|.|.. |.... ..+.|.|...
T Consensus 152 ~~~g~Y~C~a~n~~~g~~~~~s~~~~l~V~~~ 183 (265)
T 2oz4_A 152 DNGRSFSCSATLEVAGQLIHKNQTRELRVLYG 183 (265)
T ss_dssp GTTEEEEEEEEEECSSSEEEEEEEEEEEEEEE
T ss_pred cCCceEEEEEEcCCCCCcccccccEEEEEEeC
Confidence 99999999998644 66552 2255555543
No 171
>4dkd_C Macrophage colony-stimulating factor 1 receptor; dimeric four-helix bundle cytokine, receptor tyrosine kinase glycosylation; HET: NAG BMA; 3.00A {Homo sapiens}
Probab=99.74 E-value=2.3e-17 Score=119.62 Aligned_cols=168 Identities=20% Similarity=0.218 Sum_probs=113.3
Q ss_pred CCCeEEeCCCccEEeeCCeEEEEcccCCCCCCcEEEEeCCEEe---cCC-CCCeeEEeec--CCCCeEEEeeeCCc--cc
Q psy2441 28 GFPQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREMLPV---DTS-RNPRYNLLTS--GAPGTYIKIKPNLF--SP 99 (212)
Q Consensus 28 ~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~k~g~~l---~~~-~~~~~~~~~~--~~~g~~l~i~~~~~--~~ 99 (212)
.+|.+...+....+.+|+.+.|.|.+.+. +.|++++... ... ....+.+... +|.|.|.|...... ..
T Consensus 3 ~~P~i~~~~~~~~v~~G~~v~L~C~~~~~----v~W~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~ 78 (292)
T 4dkd_C 3 SIPVIEPSVPELVVKPGATVTLRCVGNGS----VEWDGPPSPHWTLYSDGSSSILSTNNATFQNTGTYRCTEPGDPLGGS 78 (292)
T ss_dssp -CCEEESCCSSCEECTTCCEEEEEECSSC----CCBCCCCCSSCEECCBTTEEEEEESSCCGGGCSCEEECCCC----CC
T ss_pred CCceecCCCCeEEEcCCCcEEEEEcCCCc----eEEccCCCCceEEeccCceEEEEEcccccccCEEEEEEEccCCCCcc
Confidence 57888888888999999999999999874 9999865321 111 0123444333 48899999876621 11
Q ss_pred eeEEeecCCCCCCCccccCCcceeEecCCcEEEEEeeeeCCC--CceEEEeC-CEEecCCCCCceEEcCCCCceeEEEcC
Q psy2441 100 LSVYSADKIPPGFPQITEAPSTKVVEISHTTVLHCSASGNPP--PKISWIRE-MLPVDTSRNPRYNLLTSGAPGALQITN 176 (212)
Q Consensus 100 ~~v~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~--~~i~W~~~-~~~~~~~~~~~~~~~~~~~~~~l~i~~ 176 (212)
..+...+..++ ..+...+....+.+|+.+.|.|.+.+ |. +.+.|+++ +..+.. ..++....+ ..|.|.+
T Consensus 79 ~~~~l~V~~~~--~~~~~~~~~~~v~~g~~v~l~C~~~~-~~~~~~v~W~~~~~~~~~~--~~~~~~~~~---~~L~i~~ 150 (292)
T 4dkd_C 79 AAIHLYVKDPA--RPWNVLAQEVVVFEDQDALLPCLLTD-PVLEAGVSLVRVRGRPLMR--HTNYSFSPW---HGFTIHR 150 (292)
T ss_dssp EEECCEECCSS--CCEEESCSEEEEETTSCEECCEEESS-GGGGSSEEEEEGGGCCCCS--SCCEECCSS---SCCEETT
T ss_pred eEEEEEEcCcc--ccccccCCeEEEcCCCcEEEeeeCCC-CCcceeEEEEecCCCcccc--CCcccccCC---ceEEECC
Confidence 12221111121 12234455677889999999999987 44 78999997 444433 234444444 5699999
Q ss_pred CCCCCCeeEEEEEEcccccceecceEEEEec
Q psy2441 177 SIEEDQGKYECVAENEVGTEYSPSTMLYVKG 207 (212)
Q Consensus 177 ~~~~d~g~y~C~a~n~~g~~~~~~~~l~v~~ 207 (212)
+..+|.|.|.|.+.|..|......+.|.|..
T Consensus 151 ~~~~d~G~Y~C~a~n~~~~~~s~~~~l~V~~ 181 (292)
T 4dkd_C 151 AKFIQSQDYQCSALMGGRKVMSISIRLKVQK 181 (292)
T ss_dssp CCGGGCSEEEEEECSTTSCEECCCEEEEEEC
T ss_pred CCHHHCeEEEEEEEeCCCceeEEEEEEEEeC
Confidence 9999999999999998886655447787775
No 172
>2kdg_A Myotilin; immonoglobulin domain, actin-binding, structural protein, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=99.74 E-value=4.3e-17 Score=99.51 Aligned_cols=94 Identities=21% Similarity=0.348 Sum_probs=76.6
Q ss_pred CccccCCcceeEecCCcEEEEEeeeeCCCCceEEEeCCEEecCCCCCceEEcCCCCceeEEEcCCCCCCCeeEEEEEEcc
Q psy2441 113 PQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREMLPVDTSRNPRYNLLTSGAPGALQITNSIEEDQGKYECVAENE 192 (212)
Q Consensus 113 p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~n~ 192 (212)
|.+...+....+.+|+.+.|.|.+.+.|.|.+.|++++..+......++.. ...+...|.|.++..+|+|.|.|.|.|.
T Consensus 6 P~~~~~p~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~-~~~~~~~L~i~~v~~~D~G~Y~C~a~n~ 84 (100)
T 2kdg_A 6 PRFIQVPENMSIDEGRFCRMDFKVSGLPAPDVSWYLNGRTVQSDDLHKMIV-SEKGLHSLIFEVVRASDAGAYACVAKNR 84 (100)
T ss_dssp EECCCCCCCEEEETTCCEEEEEECEEESCCEEEEEETTEEECCCSSSCEEE-ETTTEEEEEESSCCGGGCEEEEEEEEET
T ss_pred CeEEeCCCCEEecCCCEEEEEEEEEeeCCCEEEEEECCEECcCCCcEEEEE-cCCCeEEEEECCCCcccCEEEEEEEEcC
Confidence 666667777889999999999999999999999999999887652223322 2333358999999999999999999999
Q ss_pred cccceecceEEEEecc
Q psy2441 193 VGTEYSPSTMLYVKGT 208 (212)
Q Consensus 193 ~g~~~~~~~~l~v~~~ 208 (212)
.|..... +.|.|.++
T Consensus 85 ~g~~~~~-~~l~V~~~ 99 (100)
T 2kdg_A 85 AGEATFT-VQLDVLAK 99 (100)
T ss_dssp TEEEEEE-EEEEEECC
T ss_pred CCeEEEE-EEEEEEec
Confidence 9998776 88887764
No 173
>3tv3_L PGT128 light chain, IG lambda-2 chain C regions; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_L* 3twc_L* 3tnm_L 2mcg_1 1mcw_M 1a8j_L 3mcg_1 1dcl_A 1mcb_A* 1mcc_A* 1mcd_A* 1mce_A* 1mcf_A* 1mch_A 1mci_A* 1mcj_A* 1mck_A 1mcl_A* 1mcn_A* 1mcq_A ...
Probab=99.73 E-value=4.6e-18 Score=117.76 Aligned_cols=161 Identities=16% Similarity=0.221 Sum_probs=101.0
Q ss_pred EEeCCCccEEeeCCeEEEEcccCCCCCCcEEEEeC--CEEec---C-------CCCCeeE-----------Eeec--CCC
Q psy2441 32 ITEAPSTKVVEISHTTVLHCSASGNPPPKISWIRE--MLPVD---T-------SRNPRYN-----------LLTS--GAP 86 (212)
Q Consensus 32 ~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~k~--g~~l~---~-------~~~~~~~-----------~~~~--~~~ 86 (212)
+...+ .+.+.+|+++.|.|.+. |.+.+.|||+ +..+. . ....|+. |... +|.
T Consensus 4 v~~~~-~~~v~~G~~v~L~C~~~--~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~ 80 (211)
T 3tv3_L 4 LTQPP-SASGSPGQSITISCTGT--SNNFVSWYQQHAGKAPKLVIYDVNKRPSGVPDRFSGSKSGNTASLTVSGLQTDDE 80 (211)
T ss_dssp CBCCS-EEEECTTCEEEEEEECC--CSSCEEEEEECTTSCCEEEEBTTTBCCTTSCTTEEEEEETTEEEEEEESCCGGGC
T ss_pred EEeCc-eEEEcCCCCEEEEEEEC--CCCeEEEEEECCCCCCEEEEEEecccCCCCcCcEEEEccCCEEEEEECCCChhHC
Confidence 33445 77889999999999998 8889999994 21110 0 0112333 2222 378
Q ss_pred CeEEEeeeCCc--------cceeEEeecCCCCCCCccccCCcceeEecCCcEEEEEeeeeC--CCCceEEEeCCEEecCC
Q psy2441 87 GTYIKIKPNLF--------SPLSVYSADKIPPGFPQITEAPSTKVVEISHTTVLHCSASGN--PPPKISWIREMLPVDTS 156 (212)
Q Consensus 87 g~~l~i~~~~~--------~~~~v~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~--p~~~i~W~~~~~~~~~~ 156 (212)
|.|.|...... ..+.|.. .+..+|.+...+....+..|+.+.|.|.+.+. |.+.+.|++++..+...
T Consensus 81 G~Y~C~~~~~~~~~~~~~~~~l~V~~---~~~~~P~v~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~ 157 (211)
T 3tv3_L 81 AVYYCGSLVGNWDVIFGGGTKLTVLG---QPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAG 157 (211)
T ss_dssp EEEEEEEEETTTEEEECCCEEEEECC---SCCBCCEEEEECCCHHHHHTTCEEEEEEEEEEBSSCCEEEEEETTEEECTT
T ss_pred EEEEEEEecCCCceeECCCceEEEeC---CCCcCCeeEecCCchhhhcCCCeEEEEEeeeecCCCeEEEEEECCeecCCC
Confidence 88888765522 1222221 11233555554444334479999999999885 35799999999988652
Q ss_pred C-CCceEEcCCCC---ceeEEEcCCCCCCCeeEEEEEEccccccee
Q psy2441 157 R-NPRYNLLTSGA---PGALQITNSIEEDQGKYECVAENEVGTEYS 198 (212)
Q Consensus 157 ~-~~~~~~~~~~~---~~~l~i~~~~~~d~g~y~C~a~n~~g~~~~ 198 (212)
. ........++. ...|.|.++..+|.|.|+|.|.|..+....
T Consensus 158 ~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~Y~C~v~~~~~~~~~ 203 (211)
T 3tv3_L 158 VETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEK 203 (211)
T ss_dssp EEECCCEECTTSSEEEEEEEEECHHHHHHSSCEEEEEEETTEEEEE
T ss_pred cccCCceECCCCCEEEEEEEEEcHHHhCCCCeEEEEEEECCCCEEe
Confidence 0 00111111111 256888888889999999999998765543
No 174
>3sob_L Antibody light chain; beta propeller, protein binding-immune system complex; 1.90A {Homo sapiens} PDB: 1pkq_A 3u1s_L*
Probab=99.73 E-value=5.5e-17 Score=114.18 Aligned_cols=166 Identities=14% Similarity=0.193 Sum_probs=106.0
Q ss_pred CCCeEEeCCCccEEeeCCeEEEEcccCCCCCCcEEEEeCC--EE---e-------cCCCCCeeEEe-----------ec-
Q psy2441 28 GFPQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREM--LP---V-------DTSRNPRYNLL-----------TS- 83 (212)
Q Consensus 28 ~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~k~g--~~---l-------~~~~~~~~~~~-----------~~- 83 (212)
..+.+...|....+.+|+++.|.|.+.+.|.+.+.|||++ .. + ......|+.+. ..
T Consensus 23 ~~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~ 102 (237)
T 3sob_L 23 ADIQMTQSPSSLSASVGDRVTITCRASQDVSTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSGSGTDFTLTISSLQ 102 (237)
T ss_dssp -CCCEEEECSEEEEETTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCC
T ss_pred ccceEEeCCCeEEEeCCCcEEEEEecCCCCCceEEEEEECCCCCCEEEEEeccccCCCCCCcEEEEcCCCEEEEEECCCC
Confidence 3456667788889999999999999998888899999932 10 0 00111333322 22
Q ss_pred -CCCCeEEEeeeCC-------ccceeEEeecCCCCCCCccccCCcceeEecCCcEEEEEeeee-CC-CCceEEEeCCEEe
Q psy2441 84 -GAPGTYIKIKPNL-------FSPLSVYSADKIPPGFPQITEAPSTKVVEISHTTVLHCSASG-NP-PPKISWIREMLPV 153 (212)
Q Consensus 84 -~~~g~~l~i~~~~-------~~~~~v~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~-~p-~~~i~W~~~~~~~ 153 (212)
.|.|.|.|..... ...+.|.. ...+|.+...+....+.+|+.+.|.|.+.+ .| .+.+.|++++..+
T Consensus 103 ~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~----~~~~p~v~~~~~~~~~~~g~~v~l~C~~~~~~p~~~~v~W~k~g~~~ 178 (237)
T 3sob_L 103 PEDFATYYCQQSYTTPPTFGQGTKVEIKR----TVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQ 178 (237)
T ss_dssp GGGCEEEEEEECSSSSCEECCCEEEEEEC----CCBCCEEEEECCCHHHHHHTEEEEEEEEEEEBSSCCEEEEEETTEEC
T ss_pred hhhCeEEEEeeccCCceEEcCcEEEEEec----CCCCCceEEeCCChhhccCCceEEEEEEcccCCCceEEEEEECCCCC
Confidence 3788888877552 12333322 223355554443333446889999999988 45 5899999999887
Q ss_pred cCCC--CCceEEcCCCC---ceeEEEcCCCCCCCeeEEEEEEcccccce
Q psy2441 154 DTSR--NPRYNLLTSGA---PGALQITNSIEEDQGKYECVAENEVGTEY 197 (212)
Q Consensus 154 ~~~~--~~~~~~~~~~~---~~~l~i~~~~~~d~g~y~C~a~n~~g~~~ 197 (212)
.... ........++. ...|.|.....+|.|.|+|.|.|......
T Consensus 179 ~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~~ 227 (237)
T 3sob_L 179 SGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSP 227 (237)
T ss_dssp CSSEEEEECCCCTTTCCEEEEEEEEEEHHHHTTCCEEEEEEECTTCSSC
T ss_pred CCceeecccccccCCCcEEEEEEEEEcHHHccCCCcEEEEEeeCCCCCc
Confidence 6420 00000111111 25688888889999999999999865543
No 175
>2xzc_L FAB A.17 light chain; immune system; HET: XOP; 1.36A {Homo sapiens} PDB: 2xza_L* 3kdm_L* 3nps_C 1dn0_A 1qlr_A* 2v7n_A 3eo0_A 3eo1_A 2agj_L* 2fx7_L 1tzg_L 2fx8_L 2fx9_L* 1u6a_L 3hi1_L* 3kym_A 3kyk_L 3qwo_L* 3ixt_L* 3qeg_L ...
Probab=99.73 E-value=5.3e-17 Score=112.82 Aligned_cols=157 Identities=15% Similarity=0.209 Sum_probs=96.8
Q ss_pred CCccEEeeCCeEEEEccc-CCCC-CCcEEEEeCC--EEec----------CCCCCeeEEe-----------ec--CCCCe
Q psy2441 36 PSTKVVEISHTTVLHCSA-SGNP-PPKISWIREM--LPVD----------TSRNPRYNLL-----------TS--GAPGT 88 (212)
Q Consensus 36 ~~~~~v~~g~~v~l~C~~-~~~p-~~~v~W~k~g--~~l~----------~~~~~~~~~~-----------~~--~~~g~ 88 (212)
|....+.+|+++.|.|.+ .+.+ .+.|.|||++ ..+. .....|+.+. .. .|.|.
T Consensus 7 p~~~~v~~G~~v~L~C~v~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~ 86 (216)
T 2xzc_L 7 PPSVSAAPGQKVTISCSGSSSNIGNNYVSWYQQLPGTAPKLLIYDNNKRPSGIPDRFSGSKSGTSATLGITGLQTGDEAD 86 (216)
T ss_dssp CSEEEECTTCCEEEEEECCTTTGGGSCCEEEEECTTSCCEEEEBTTTBCCTTCCTTEEEEEETTEEEEEECSCCGGGCEE
T ss_pred CCcEEecCCCeEEEEEEeecCCCCCCeEEEEEeCCCCCcEEEEEecCccCCCCCCceEEeccCCEEEEEECCCCcccCEE
Confidence 567789999999999995 4443 5789999953 1110 1111333332 22 37888
Q ss_pred EEEeeeCCcc--------ceeEEeecCCCCCCCccccCCcceeEecCCcEEEEEeeee-CCCC-ceEEEeCCEEecCCCC
Q psy2441 89 YIKIKPNLFS--------PLSVYSADKIPPGFPQITEAPSTKVVEISHTTVLHCSASG-NPPP-KISWIREMLPVDTSRN 158 (212)
Q Consensus 89 ~l~i~~~~~~--------~~~v~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~-~p~~-~i~W~~~~~~~~~~~~ 158 (212)
|.|....... .+.| .....+|.+...+.......|+.+.|.|.+.+ .|.+ .+.|++++..+.....
T Consensus 87 Y~C~~~~~~~~~~~~~~~~l~V----~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~k~g~~~~~~~~ 162 (216)
T 2xzc_L 87 YYCGTWDSSLNPVFGGGTKLEI----KRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQ 162 (216)
T ss_dssp EEEEEECTTSCEEEBCCEEEEE----CCCCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCCEEEEEETTEECCSSEE
T ss_pred EEEEEEeCCCcceECCCEEEEE----cCCCCCCceEEeCCChhhccCCcEEEEEEEEeEcCCceEEEEEECCeecCCCee
Confidence 8888776321 2222 11222355554332222235889999999988 5554 8999999988754200
Q ss_pred CceEEc--CCCC---ceeEEEcCCCCCCCeeEEEEEEcccccc
Q psy2441 159 PRYNLL--TSGA---PGALQITNSIEEDQGKYECVAENEVGTE 196 (212)
Q Consensus 159 ~~~~~~--~~~~---~~~l~i~~~~~~d~g~y~C~a~n~~g~~ 196 (212)
...... .++. .+.|.|.++..+|.|.|+|.|.|.....
T Consensus 163 ~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~ 205 (216)
T 2xzc_L 163 ESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSS 205 (216)
T ss_dssp EEECCCCTTTCCEEEEEEEEEEHHHHTTCCEEEEEEECTTCSS
T ss_pred EecCcccCCCCCEEEEEEEEECHHHhCCCCcEEEEEEcCCCCC
Confidence 000011 1111 2478999999999999999999986554
No 176
>1dr9_A B7-1 (CD80), T lymphocyte activation antigen; IG superfamily, immune system; HET: NAG; 3.00A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1i8l_A*
Probab=99.73 E-value=7.4e-17 Score=110.82 Aligned_cols=154 Identities=16% Similarity=0.202 Sum_probs=96.1
Q ss_pred ccEEeeCCeEEEEcccCC----CCCCcEEEEeCCEEec--------------------CCCCCeeEEeec--CCCCeEEE
Q psy2441 38 TKVVEISHTTVLHCSASG----NPPPKISWIREMLPVD--------------------TSRNPRYNLLTS--GAPGTYIK 91 (212)
Q Consensus 38 ~~~v~~g~~v~l~C~~~~----~p~~~v~W~k~g~~l~--------------------~~~~~~~~~~~~--~~~g~~l~ 91 (212)
.+.+.+|+++.|.|.+.+ .|.+.+.|+|++..+. ......+.+... .|.|.|.|
T Consensus 3 ~v~v~~G~~v~L~C~~~~~~~~~~~~~~~W~~~~~~i~~~~~~~~~~~~~~~~r~~~~~~~~~~L~I~~v~~~D~G~Y~C 82 (201)
T 1dr9_A 3 HVTKEVKEVATLSCGHNVSVEELAQTRIYWQKEKKMVLTMMSGDMNIWPEYKNRTIFDITNNLSIVILALRPSDEGTYEC 82 (201)
T ss_dssp EEEEETTSCEEECCSCCCCTTHHHHCEEEEEETTEEEEEEETTEEEECHHHHTTEEEESTTTTEEEECSCCGGGCEEEEE
T ss_pred eEEEEeCCCEEEecccCCCcccccccEEEEEeCCcEEEEEeCCceeecCcccceeEEccCCCcEEEEecccchhCeEEEE
Confidence 467889999999999953 3567899999998762 111123444433 48889999
Q ss_pred eeeCCc---------cceeEEeecCCCCCCCccccCCcceeEecCCcEEEEEeee-eCCCCceEEEeCCEEecCCCCCce
Q psy2441 92 IKPNLF---------SPLSVYSADKIPPGFPQITEAPSTKVVEISHTTVLHCSAS-GNPPPKISWIREMLPVDTSRNPRY 161 (212)
Q Consensus 92 i~~~~~---------~~~~v~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~-~~p~~~i~W~~~~~~~~~~~~~~~ 161 (212)
...... ..+.+... .+...|.+.. .....|+.+.|.|.+. +.|.|.+.|++++..+... ..++
T Consensus 83 ~~~~~~g~~~~~~~~~~~~l~V~--~~~~~p~~~~----~~~~~g~~~~l~C~~~~g~P~p~i~W~k~g~~l~~~-~~~~ 155 (201)
T 1dr9_A 83 VVLKYEKDAFKREHLAEVTLSVK--ADFPTPSISD----FEIPTSNIRRIICSTSGGFPEPHLSWLENGEELNAI-NTTV 155 (201)
T ss_dssp EEEECCTTSCEEEEEEEEEEEEE--CCCCCCEEEE----EECSSTTEEEEEEEEEEESSCEEEEEEESSCEECCS-EEEE
T ss_pred EEEcCCCCccccccccEEEEEEc--CCCCCCceEe----ccCCCCCeEEEEEecCCccCCCEEEEEECCEECccc-cceE
Confidence 877621 12222221 1111122221 1124488899999994 9999999999999888753 1222
Q ss_pred EEcCCCC-ceeEEEcCCCCCCCeeEEEEEEccccccee
Q psy2441 162 NLLTSGA-PGALQITNSIEEDQGKYECVAENEVGTEYS 198 (212)
Q Consensus 162 ~~~~~~~-~~~l~i~~~~~~d~g~y~C~a~n~~g~~~~ 198 (212)
....+++ .....+..+..+|.|.|+|.|.|..|....
T Consensus 156 ~~~~~~~~~~~~~~~~v~~~d~g~Y~C~a~n~~~~~s~ 193 (201)
T 1dr9_A 156 SQDPETELYAVSSKLDFNMTTNHSFMCLIKYGHLRVNQ 193 (201)
T ss_dssp EECTTTCCEEEEEEEEEETTSCEEEEEEEEETTCCEEE
T ss_pred EecCCCcEEEEEEEEEEEecCCCEEEEEEecCcceeee
Confidence 2222211 112223345568999999999999887753
No 177
>3omz_A Human vdelta1 gamma delta T cell receptor delta1A; immunoglobulin fold, immune surveillance of cell stress PROT A/B, MIC-A/B binding, epithelium; 3.04A {Homo sapiens}
Probab=99.73 E-value=1.4e-16 Score=113.80 Aligned_cols=182 Identities=18% Similarity=0.259 Sum_probs=99.9
Q ss_pred CCeEEeCCCccEEeeCCeEEEEcccCCCCCCcEEEEeC---CEE--e---c---------C-------------CCCCee
Q psy2441 29 FPQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIRE---MLP--V---D---------T-------------SRNPRY 78 (212)
Q Consensus 29 ~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~k~---g~~--l---~---------~-------------~~~~~~ 78 (212)
+|.+...|..+.+.+|++++|.|.+.+.+.+.+.|||. ..+ + . . .....+
T Consensus 2 s~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L 81 (259)
T 3omz_A 2 SSNLEGRTKSVIRQTGSSAEITCDLAEGSTGYIHWYLHQEGKAPQRLLYYDSYTSSVVLESGISPGKYDTYGSTRKNLRM 81 (259)
T ss_dssp ---------CEEEETTCCEEEECCC-----CEEEEEEECTTSCCEEEEEEETTTCCEEECTTCCBTTEEEECC--CCCEE
T ss_pred ccccccCCceeEecCCCcEEEEEEEccCCCcEEEEEEECCCCCcEEEEEEecCcCccccCCCCCcceeEeecCCCCeEEE
Confidence 45667778889999999999999999888889999992 111 1 0 0 001113
Q ss_pred EEeec--CCCCeEEEeeeCCc---------cceeEEeecCCCC----------CCCccccCCcceeEecCCcEEEEEeee
Q psy2441 79 NLLTS--GAPGTYIKIKPNLF---------SPLSVYSADKIPP----------GFPQITEAPSTKVVEISHTTVLHCSAS 137 (212)
Q Consensus 79 ~~~~~--~~~g~~l~i~~~~~---------~~~~v~~~~~~~~----------~~p~~~~~~~~~~~~~g~~~~l~C~~~ 137 (212)
.|... +|.|.|.|...... ..+.|......+. ..+.+...+....+.+|+++.|.|.+.
T Consensus 82 ~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~~v~~G~~v~L~C~~~ 161 (259)
T 3omz_A 82 ILRNLIENDSGVYYCATWDQNYYKKLFGSGTSLVVTDKQGSADDAKKDAAKKDGAQKVTQAQSSVSMPVRKAVTLNCLYE 161 (259)
T ss_dssp EESSCCGGGCEEEEEEEECTTSSCEEECCCEEEEEEC------------------CEEECCCCCEEEETTCCEEECCEEE
T ss_pred EECCCCcccCEEEEEEEeeCCccccEECCCCEEEEecCCCCccccccccccccCCeeeEEeCCEEEEcCCCCEEEEEECC
Confidence 33322 48888988776521 2344433211110 024556666678899999999999987
Q ss_pred eC-CCCceEEEeCCE--EecC----------CCCCceEEcC--CCCceeEEEcCCCCCCCeeEEEEEEccccc----cee
Q psy2441 138 GN-PPPKISWIREML--PVDT----------SRNPRYNLLT--SGAPGALQITNSIEEDQGKYECVAENEVGT----EYS 198 (212)
Q Consensus 138 ~~-p~~~i~W~~~~~--~~~~----------~~~~~~~~~~--~~~~~~l~i~~~~~~d~g~y~C~a~n~~g~----~~~ 198 (212)
+. +.+.+.|+++.. .... ....++.... ......|.|.++..+|+|.|.|.+.+..+. ...
T Consensus 162 ~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~fg 241 (259)
T 3omz_A 162 TSWWSYYIFWYKRLPSKEMIFLIRQGSDEQNAKSGRYSVNFKKAAKSVALTISALQLEDSAKYFCALGESLTRADKLIFG 241 (259)
T ss_dssp CCCSSCEEEEEEECTTCCEEEEEEEETTSCCCEETTEEECCBGGGTBCCEEESSCCGGGCSEEEEEEESCSSTTCCCEEC
T ss_pred CccCCceEEEeeeCCCCCcEEEEEECCcCCcccCCeEEEEEcCcCCEEEEEECCCChhHCEEEEEEEeCccCCCCceEEC
Confidence 75 778999998431 1100 0013444432 122467999999999999999999753211 111
Q ss_pred cceEEEEeccee
Q psy2441 199 PSTMLYVKGTQV 210 (212)
Q Consensus 199 ~~~~l~v~~~~~ 210 (212)
....|.|+..+.
T Consensus 242 ~GT~l~v~~~~~ 253 (259)
T 3omz_A 242 KGTRVTVEPRSQ 253 (259)
T ss_dssp CCEEEEEEC---
T ss_pred CCCEEEEeeCcc
Confidence 225677766543
No 178
>3irg_A Titin; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_A 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=99.73 E-value=4.2e-17 Score=99.49 Aligned_cols=94 Identities=19% Similarity=0.433 Sum_probs=78.5
Q ss_pred CccccCCcceeEecCCcEEEEEeeeeCCCCceEEEeCCEEecCCCCCceEEcCCCCceeEEEcCCCCCCCeeEEEEEEcc
Q psy2441 113 PQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREMLPVDTSRNPRYNLLTSGAPGALQITNSIEEDQGKYECVAENE 192 (212)
Q Consensus 113 p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~n~ 192 (212)
|.+...+....+.+|+.+.|.|.+.+.|.|.+.|++++..+......++....+.....|.|.++..+|+|.|.|.|.|.
T Consensus 6 P~i~~~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~ 85 (100)
T 3irg_A 6 PKIEALPSDISIDEGKVLTVACAFTGEPTPEVTWSCGGRKIHSQEQGRFHIENTDDLTTLIIMDVQKQDGGLYTLSLGNE 85 (100)
T ss_dssp EEECCCCSEEEEETTSEEEEEEEEEEESCCEEEEEETTEECCTTGGGTEEEEECSSEEEEEESSCCGGGCEEEEEEEEET
T ss_pred CeeecCCCcEEEcCCCcEEEEEEEEEcCCCceEEEECCEEeecCCCCEEEEEecCCEEEEEEeecCcccCEEEEEEEEeC
Confidence 66666677788999999999999999999999999999988654345666665555578999999999999999999999
Q ss_pred cccceecceEEEEec
Q psy2441 193 VGTEYSPSTMLYVKG 207 (212)
Q Consensus 193 ~g~~~~~~~~l~v~~ 207 (212)
.|..... +.|.|+.
T Consensus 86 ~g~~~~~-~~l~V~~ 99 (100)
T 3irg_A 86 FGSDSAT-VNIHIRS 99 (100)
T ss_dssp TEEEEEE-EEEEEEC
T ss_pred CCcEEEE-EEEEEEe
Confidence 9997766 7777753
No 179
>3bkj_L WO2 IGG2A FAB fragment light chain kappa; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} PDB: 3bkc_L 3bkm_L 2zuq_B* 1h3p_L
Probab=99.73 E-value=7.4e-17 Score=114.78 Aligned_cols=165 Identities=15% Similarity=0.208 Sum_probs=103.3
Q ss_pred CCCeEEeCCCccEEeeCCeEEEEcccCCCC-----CCcEEEEeCC--EEe----------cCCCCCeeEEe---------
Q psy2441 28 GFPQITEAPSTKVVEISHTTVLHCSASGNP-----PPKISWIREM--LPV----------DTSRNPRYNLL--------- 81 (212)
Q Consensus 28 ~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p-----~~~v~W~k~g--~~l----------~~~~~~~~~~~--------- 81 (212)
..+.+...|..+.+.+|++++|.|.+.+.+ .+.|.|||++ ..+ ......|+.+.
T Consensus 33 ~~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~ 112 (252)
T 3bkj_L 33 SDVLMTQTPLSLPVNLGEQASISCRSSQSIVHSNGHTYLEWYLQRPGQSPKLLIYQVSTRFSGVPDRFSGSGSGTDFTLR 112 (252)
T ss_dssp -CCCEEEECSEEEECTTSCEEEEEEESSCCBCTTSCBCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEE
T ss_pred cccEEEeCCceEEEeCCCcEEEEEEcCCCccccCCCCcEEEEEECCCCCcEEEEEcCCcccCCcCCceEEEccCCEEEEE
Confidence 345666778888999999999999998887 5789999954 111 01111333322
Q ss_pred --ec--CCCCeEEEeeeCCc-------cceeEEeecCCCCCCCccccCCcceeEecCCcEEEEEeeee-CCCC-ceEEEe
Q psy2441 82 --TS--GAPGTYIKIKPNLF-------SPLSVYSADKIPPGFPQITEAPSTKVVEISHTTVLHCSASG-NPPP-KISWIR 148 (212)
Q Consensus 82 --~~--~~~g~~l~i~~~~~-------~~~~v~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~-~p~~-~i~W~~ 148 (212)
.. .|.|.|.|...... ..+.|. ....+|.+...+....+.+|+.+.|.|.+.+ .|.+ .+.|++
T Consensus 113 I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~----~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k 188 (252)
T 3bkj_L 113 ISRVEAEDLGVYYCFQASLVPLTFGAGTKLELK----RADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKI 188 (252)
T ss_dssp ESSCCGGGCEEEEEEECSBSSCEECCCEEEEEC----CCCBCCEEEEECCCHHHHHHTEEEEEEEEEEEBSSCCEEEEEE
T ss_pred ECCCCcccCEEEEEEEEcCCccEECCCEEEEEe----CCCcCcEEEEeCCChhhcCCCcEEEEEEEeeEeCCCcEEEEEE
Confidence 21 37888888776531 122332 1112355554333222346899999999988 4544 799999
Q ss_pred CCEEecCC-C-CCceEEcCCCC---ceeEEEcCCCCCCCeeEEEEEEcccccc
Q psy2441 149 EMLPVDTS-R-NPRYNLLTSGA---PGALQITNSIEEDQGKYECVAENEVGTE 196 (212)
Q Consensus 149 ~~~~~~~~-~-~~~~~~~~~~~---~~~l~i~~~~~~d~g~y~C~a~n~~g~~ 196 (212)
++..+... . ........++. ...|.|.++..+|.|.|+|.|.|.....
T Consensus 189 ~g~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~ 241 (252)
T 3bkj_L 189 DGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTS 241 (252)
T ss_dssp TTEEECSSEEEEECCCCTTTCCEEEEEEEEEEHHHHHHCCEEEEEEECTTCSS
T ss_pred CCeecCCCeeeecCcccCCCCCEEEEEEEEEcchhccCCCeEEEEEEeCCCCC
Confidence 99887542 0 00010111111 2468999999999999999999976543
No 180
>2rgs_A I, IG gamma-2B heavy chain; FC-fragment, immunoglobulin, glycosylation, immune system; HET: NAG FUC MAN GAL; 2.13A {Mus musculus}
Probab=99.73 E-value=1.6e-17 Score=115.72 Aligned_cols=168 Identities=20% Similarity=0.233 Sum_probs=100.7
Q ss_pred CCCeEEeCCCccE--EeeCCeEEEEcccCCC---CC-CcEEEEeCCEEecCCC--------CCee------EEeec--CC
Q psy2441 28 GFPQITEAPSTKV--VEISHTTVLHCSASGN---PP-PKISWIREMLPVDTSR--------NPRY------NLLTS--GA 85 (212)
Q Consensus 28 ~~p~~~~~~~~~~--v~~g~~v~l~C~~~~~---p~-~~v~W~k~g~~l~~~~--------~~~~------~~~~~--~~ 85 (212)
.+|.+.+.+.... +.+|+++.|.|.+.+. |. +.|.|||++..+.... ..++ .+... +|
T Consensus 8 ~~p~v~~~pp~~~~~v~~G~~v~L~C~~~g~~~~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D 87 (218)
T 2rgs_A 8 GGPSVFIFPPNIKDVLMISLTPKVTCVVVDVSEDDPDVQISWFVNNVEVHTAQTQTHREDYNSTIRVVSTLPIQHQDWMS 87 (218)
T ss_dssp -CCEEEEECCCHHHHHCTTSCCEEEEEEEEECTTSCCEEEEEEETTEEECCCEEEEEEETTTTEEEEEEEEECCHHHHHT
T ss_pred CCCEEEEECcCHHHhhccCCCeeEEEEEcCCccCCCceEEEEEECCccccCcccccccccCCCeEEEEEEEEEcHHHcCC
Confidence 5667765555544 7899999999999876 33 6899999997765320 1222 11111 37
Q ss_pred CCeEEEeeeCCccce----eEEeecCCCCCCCccccCCcceeEecCCcEEEEEeeee-CCCC-ceEEEeCCEEecCCCCC
Q psy2441 86 PGTYIKIKPNLFSPL----SVYSADKIPPGFPQITEAPSTKVVEISHTTVLHCSASG-NPPP-KISWIREMLPVDTSRNP 159 (212)
Q Consensus 86 ~g~~l~i~~~~~~~~----~v~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~-~p~~-~i~W~~~~~~~~~~~~~ 159 (212)
.|.|.|......... .+.. ......+|.+...+.......|+.+.|.|.+.| .|.+ .+.|++++..+......
T Consensus 88 ~g~Y~C~~~~~~~~~~~~~~v~~-~~~~~~~P~v~~~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~~~~~~~~ 166 (218)
T 2rgs_A 88 GKEFKCKVNNKDLPSPIERTISK-IKGLVRAPQVYILPPPAEQLSRKDVSLTCLVVGFNPGDISVEWTSNGHTEENYKDT 166 (218)
T ss_dssp TCCEEEEEEETTCSSCEEEEECC-CCCCCBCCEEEEECCCGGGTTSSEEEEEEEEEEEBSSCCEEEEEETTEEECCEEEC
T ss_pred CCeEEEEEECCcCCCcceEEEee-cCCCCCCCEEEEECCChHHhcCCceEEEEEEEeeeCCCcEEEEEECCEeccCceec
Confidence 889999877633221 1211 011122355543333222235899999999998 6765 99999999887532111
Q ss_pred ceEEcCCCC---ceeEEEcCCCCCCCeeEEEEEEcccccc
Q psy2441 160 RYNLLTSGA---PGALQITNSIEEDQGKYECVAENEVGTE 196 (212)
Q Consensus 160 ~~~~~~~~~---~~~l~i~~~~~~d~g~y~C~a~n~~g~~ 196 (212)
++....++. .+.|.+.....+|.|.|+|.|.|.....
T Consensus 167 ~~~~~~~gt~~~~s~l~v~~~~~~d~g~YtC~a~n~~l~~ 206 (218)
T 2rgs_A 167 APVLDSDGSYFIYSKLNMKTSKWEKTDSFSCNVRHEGLKN 206 (218)
T ss_dssp CCEECTTSCEEEEEEEEEEHHHHHHCSCEEEEEECTTSGG
T ss_pred ccEECCCCCEEEEEEEEECHHHcCCCCeEEEEEEcCCCCC
Confidence 111122211 1335555555567999999999976543
No 181
>1g1c_A Immunoglobulin-like domain I1 from titin; immunoglobulin domain, beta-sandwhich, I-SET, structural protein; 2.10A {Homo sapiens} SCOP: b.1.1.4
Probab=99.73 E-value=5e-17 Score=99.05 Aligned_cols=92 Identities=22% Similarity=0.316 Sum_probs=75.9
Q ss_pred CccccCCcceeEecCCcEEEEEeeeeCCCCceEEEeCCEEecCCCCCceEEc-CCCCceeEEEcCCCCCCCeeEEEEEEc
Q psy2441 113 PQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREMLPVDTSRNPRYNLL-TSGAPGALQITNSIEEDQGKYECVAEN 191 (212)
Q Consensus 113 p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~-~~~~~~~l~i~~~~~~d~g~y~C~a~n 191 (212)
|.+...+....+.+|+.+.|.|.+.+.|.|.+.|++++..+... .++... .......|.|.++..+|+|.|.|.|.|
T Consensus 6 P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~g~~~~~~--~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N 83 (99)
T 1g1c_A 6 PKIFERIQSQTVGQGSDAHFRVRVVGKPDPECEWYKNGVKIERS--DRIYWYWPEDNVCELVIRDVTGEDSASIMVKAIN 83 (99)
T ss_dssp EEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCC--SSEEEEEEETTEEEEEECSCCGGGCEEEEEEEEE
T ss_pred CceEecCcceEEcCCCcEEEEEEEEEeCCCEEEEEECCEECCCC--CCEEEEEcCCCEEEEEECCCCcCCCEEEEEEEEE
Confidence 66767777788999999999999999999999999999988764 333222 122236899999999999999999999
Q ss_pred ccccceecceEEEEec
Q psy2441 192 EVGTEYSPSTMLYVKG 207 (212)
Q Consensus 192 ~~g~~~~~~~~l~v~~ 207 (212)
..|..... +.|.|.+
T Consensus 84 ~~g~~~~~-~~l~V~~ 98 (99)
T 1g1c_A 84 IAGETSSH-AFLLVQA 98 (99)
T ss_dssp TTEEEEEE-EEEEEEC
T ss_pred CCCcEEEE-EEEEEec
Confidence 99998877 8888765
No 182
>1igy_B IGG1 intact antibody MAB61.1.3; intact immunoglobulin, V region, C region, hinge region, immunoglobulin; HET: NAG FUL NDG BMA MAN GAL FUC; 3.20A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=99.73 E-value=1.7e-18 Score=132.46 Aligned_cols=189 Identities=17% Similarity=0.169 Sum_probs=110.8
Q ss_pred eeeEEEeeccCCCcceeccccc-----------CCCCCeEE-eCCCccE-EeeCCeEEEEcccCCCC----CCcEEEEeC
Q psy2441 4 GTYIKIKPNLFSPLSVYSADKI-----------PPGFPQIT-EAPSTKV-VEISHTTVLHCSASGNP----PPKISWIRE 66 (212)
Q Consensus 4 g~Y~C~~~~~~~~~~~~~~~~~-----------~~~~p~~~-~~~~~~~-v~~g~~v~l~C~~~~~p----~~~v~W~k~ 66 (212)
|.|+|.+.|..+.......... ....|.+. ..|.... +.+|+.+.|.|.+.+.+ .+.|.|+|+
T Consensus 192 g~Y~C~a~n~~~~~~~~~~~~~~~~~~~v~~~~~~~~p~v~~~~p~~~~~v~~G~~~~L~C~~~g~~p~P~~~~i~W~k~ 271 (434)
T 1igy_B 192 ETVTCNVAHPASSTKVDKKIVPRDCGCKPCICTVPEVSSVFIFPPKPKDTLLITVTPKVTCVVVDISKDDPEVQFSWFVD 271 (434)
T ss_dssp SCCEEEEECTTTTCCEEEECCCCCCCCCCCCCCCSSSCCEEEECCCHHHHHSTTSCCEEEEEECCCCSSCCCCCBCBBSS
T ss_pred CcEEEEEEeCCCCccceeeccCCCCCCccccCCCCcCcEEEEeCCChHHhcccCCCcEEEEEEeccccCCCCeEEEEEeC
Confidence 7899999998886432211111 00114444 4443332 78999999999998874 358999999
Q ss_pred CEEecCCC--------C------CeeEEeec--CCCCeEEEeeeCCccc----eeEEeecCCCCCCCccccCCcceeEec
Q psy2441 67 MLPVDTSR--------N------PRYNLLTS--GAPGTYIKIKPNLFSP----LSVYSADKIPPGFPQITEAPSTKVVEI 126 (212)
Q Consensus 67 g~~l~~~~--------~------~~~~~~~~--~~~g~~l~i~~~~~~~----~~v~~~~~~~~~~p~~~~~~~~~~~~~ 126 (212)
|..+.... . ..+.+... +|.|.|.|...+.... ..+... .....+|.+...+.......
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~v~~~-~~~~~~P~v~~~~~~~~~~~ 350 (434)
T 1igy_B 272 NVEVHTAQTQPREEQFNSTFRVVSALPIMHQDWLNGKEFKCRVNSAAFPAPIEKTISKT-KGKPRAPQVYTIPPPKEQMA 350 (434)
T ss_dssp SCCBCCCSCCCCCCCCSSSCCCCCCEECCHHHHHHTCCCBCCBCCSSCSSCCCCCCCCC-CSCCBCCCCEEECCCSSSSS
T ss_pred CcccCCcccCcceeCCCCcEEEEEEEEECHHHccCCCcEEEEEECCCCCCceeEEEecc-CCCCcCCEEEEECCCHHHhc
Confidence 97764321 0 11222221 3678888877663221 111110 01122355544333222335
Q ss_pred CCcEEEEEeeeeC-CC-CceEEEeCCEEecCCCCCceEE--cCCCC---ceeEEEcCCCCCCCeeEEEEEEccccc
Q psy2441 127 SHTTVLHCSASGN-PP-PKISWIREMLPVDTSRNPRYNL--LTSGA---PGALQITNSIEEDQGKYECVAENEVGT 195 (212)
Q Consensus 127 g~~~~l~C~~~~~-p~-~~i~W~~~~~~~~~~~~~~~~~--~~~~~---~~~l~i~~~~~~d~g~y~C~a~n~~g~ 195 (212)
|+.+.|.|.+.+. |. +.+.|++++..+... ..... ..++. .+.|.+.....+|.|.|+|.|.|....
T Consensus 351 ~~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~--~~~~~~~~~~g~~~~~s~l~i~~~~~~~~g~YtC~a~n~~l~ 424 (434)
T 1igy_B 351 KDKVSLTCMITDFFPEDITVEWQSDGQAPENY--KNTQPIMDTDGSYFVYSKLNVQKSNWEAGNTFTCSVLHEGLH 424 (434)
T ss_dssp SSEEEEEEEEEEEBCSCEEEEEEETTSCCSCC--EECCCCCCSSSCEEEEEEEEEEHHHHHTTCCEEEEEEETTSG
T ss_pred CCcEEEEEEEEeeECCCeEEEEEECCEecCCc--eeccceeCCCCcEEEEEEEEECchhccCCCEEEEEEEcCCCC
Confidence 7789999999885 43 389999999877432 11111 11111 245677777778899999999997543
No 183
>1iga_A IGA1; immunoglobulin; NMR {Homo sapiens} PDB: 2esg_A 2qtj_A 3chn_A 1r70_B 3cm9_A
Probab=99.73 E-value=2.5e-16 Score=121.85 Aligned_cols=194 Identities=12% Similarity=0.125 Sum_probs=111.8
Q ss_pred ceeeEEEeeccCCC-----cceecccccCC----CCCeEEeCCCccEEeeCCeEEEEcccCCC-CC-C-cEEEEeCCEEe
Q psy2441 3 IGTYIKIKPNLFSP-----LSVYSADKIPP----GFPQITEAPSTKVVEISHTTVLHCSASGN-PP-P-KISWIREMLPV 70 (212)
Q Consensus 3 ~g~Y~C~~~~~~~~-----~~~~~~~~~~~----~~p~~~~~~~~~~v~~g~~v~l~C~~~~~-p~-~-~v~W~k~g~~l 70 (212)
+|.|+|.+.+..+. .......+.+. .+|.+...+.. .+.+|+.+.|.|.+.+. |. + .|.|+|++..+
T Consensus 92 ~G~Y~C~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~-~~~~g~~v~L~C~~~g~~P~~p~~v~W~~~~~~~ 170 (475)
T 1iga_A 92 TAVYYCARDPYGGGKSEFDYWGQGTLVTVSSASPTSPKVFPLSLC-STQPDGNVVIACLVQGFFPQEPLSVTWSESGQGV 170 (475)
T ss_pred CEEEEEEEeccCCCccceeeecCceEEEeccCCCcCCeEEecCcc-ccCCCCeEEEEEEEeeecCCCceEEEEcCCCccc
Confidence 58999999987642 11112223332 35665543322 23689999999999886 55 4 89999988532
Q ss_pred cC--------CCCCeeE------Eeec--CCCCeEEEeeeCCcc---ceeEEeecCC--------------C-CCCCcc-
Q psy2441 71 DT--------SRNPRYN------LLTS--GAPGTYIKIKPNLFS---PLSVYSADKI--------------P-PGFPQI- 115 (212)
Q Consensus 71 ~~--------~~~~~~~------~~~~--~~~g~~l~i~~~~~~---~~~v~~~~~~--------------~-~~~p~~- 115 (212)
.. .....+. +... +|.|.|.|....... ...+...+.. . ..+|.+
T Consensus 171 ~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~~~~~v~l~V~~~~~~~~~~~~~~~~~~~~~p~v~ 250 (475)
T 1iga_A 171 TARNFPPSQDASGDLYTTSSQLTLPATQCLAGKSVTCHVKHYTNPSQDVTVPCPVPSTPPTPSPSTPPTPSPSCCHPRLS 250 (475)
T ss_pred ceEeCCceecCCCCcEEEEEEEEechhHcCCCceEEEEEEECCCCceeeeEecccccCcccccccccccCCCCCCCcEEE
Confidence 11 0112222 2221 367899998776322 1122210000 0 012333
Q ss_pred ccCCcceeEecCCcEEEEEeeeeCCC---CceEEEeCCEEecCCCCCceEEcCCC---CceeEEEcCCCCCCCeeEEEEE
Q psy2441 116 TEAPSTKVVEISHTTVLHCSASGNPP---PKISWIREMLPVDTSRNPRYNLLTSG---APGALQITNSIEEDQGKYECVA 189 (212)
Q Consensus 116 ~~~~~~~~~~~g~~~~l~C~~~~~p~---~~i~W~~~~~~~~~~~~~~~~~~~~~---~~~~l~i~~~~~~d~g~y~C~a 189 (212)
...+....+.+|+.+.|.|.+.+.++ +.|.| . +..+............++ ..+.|.|.++..+|.|.|.|.|
T Consensus 251 ~~~p~~~~~~~G~~v~L~C~~~g~~p~~~~~i~W-~-~~~~~~~~~~~~~~~~~g~~~~~~~L~I~~~~~~d~G~Y~C~a 328 (475)
T 1iga_A 251 LHRPALEDLLLGSEANLTCTLTGLRDASGVTFTW-T-PSSGKSAVQGPPERDLCGCYSVSSVLPGCAEPWNHGKTFTCTA 328 (475)
T ss_pred EcCCChHHhccCCceEEEEEEEcccCCCceEEEE-C-CCCcCCccccCceECCCCCEEEEEEEEEchHHhccCCcEEEEE
Confidence 22333334578999999999988754 58999 4 433322101111111111 1257999999999999999999
Q ss_pred Ecccccceec
Q psy2441 190 ENEVGTEYSP 199 (212)
Q Consensus 190 ~n~~g~~~~~ 199 (212)
.|..|.....
T Consensus 329 ~n~~~~~~~~ 338 (475)
T 1iga_A 329 AYPESKTPLT 338 (475)
T ss_pred EcCCCCCceE
Confidence 9998876433
No 184
>2dm2_A Palladin; beta-sandwich, KIAA0992, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.73 E-value=6.7e-17 Score=100.43 Aligned_cols=98 Identities=22% Similarity=0.384 Sum_probs=80.4
Q ss_pred CCCccccCCcceeEecCCcEEEEEeeeeCCCCceEEEeCCEEecCCCCCceEEcCC-CCceeEEEcCCCCCCCeeEEEEE
Q psy2441 111 GFPQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREMLPVDTSRNPRYNLLTS-GAPGALQITNSIEEDQGKYECVA 189 (212)
Q Consensus 111 ~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~-~~~~~l~i~~~~~~d~g~y~C~a 189 (212)
.+|.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+... ..++....+ .+...|.|.++..+|.|.|.|.|
T Consensus 7 ~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~g~~~~~~-~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a 85 (110)
T 2dm2_A 7 GAPFFEMKLKHYKIFEGMPVTFTCRVAGNPKPKIYWFKDGKQISPK-SDHYTIQRDLDGTCSLHTTASTLDDDGNYTIMA 85 (110)
T ss_dssp CCCCBSSCCCCEEEETTCCEEEEEEBCCSSCCEEEEECSSCBCCTT-CSSEEEEECTTCEEEEEESSCCTTTCSCCEEEE
T ss_pred CCCEEEecCcCeEEeCCCeEEEEEEEEecCCCEEEEEECCEECCCC-CCeEEEEECCCcEEEEEECCCChhhCEEEEEEE
Confidence 3477887888888999999999999999999999999999887753 244444333 22348999999999999999999
Q ss_pred EcccccceecceEEEEeccee
Q psy2441 190 ENEVGTEYSPSTMLYVKGTQV 210 (212)
Q Consensus 190 ~n~~g~~~~~~~~l~v~~~~~ 210 (212)
.|..|..... +.|.|.+.+.
T Consensus 86 ~N~~g~~~~~-~~l~V~~~~~ 105 (110)
T 2dm2_A 86 ANPQGRISCT-GRLMVQAVNS 105 (110)
T ss_dssp ECTTCCEEEC-CCEEEECCSC
T ss_pred EECCCeEEEE-EEEEEECCCC
Confidence 9999998777 8888877654
No 185
>1wit_A Twitchin 18TH IGSF module; immunoglobulin superfamily, I SET, muscle protein; NMR {Caenorhabditis elegans} SCOP: b.1.1.4 PDB: 1wiu_A
Probab=99.72 E-value=4.1e-17 Score=98.30 Aligned_cols=89 Identities=18% Similarity=0.291 Sum_probs=72.1
Q ss_pred CccccCCcceeEecCCcEEEEEeeeeCCCCceEEEeCC--EEecCCCCCceEEcCCCCceeEEEcCCCCCCCeeEEEEEE
Q psy2441 113 PQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREM--LPVDTSRNPRYNLLTSGAPGALQITNSIEEDQGKYECVAE 190 (212)
Q Consensus 113 p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~--~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~ 190 (212)
|.+...+....+.+|+.+.|.|.+.|.|.|.+.|++++ ..+... ..+... .....|.|.++..+|+|.|.|.|.
T Consensus 3 P~i~~~~~~~~v~~G~~~~l~C~~~g~P~p~i~W~k~~~~~~~~~~--~~~~~~--~~~~~L~i~~~~~~D~G~Y~C~a~ 78 (93)
T 1wit_A 3 PKILTASRKIKIKAGFTHNLEVDFIGAPDPTATWTVGDSGAALAPE--LLVDAK--SSTTSIFFPSAKRADSGNYKLKVK 78 (93)
T ss_dssp CEECCCCCEEEECTTBCCEEEEEEECCSSCEEEEECSTTTCBCSTT--SEEEEE--TTEEEEECTTBCGGGCEEEEEEEE
T ss_pred CeEEcCCCceEEeCCCEEEEEEEEEEcCCCEEEEEECCCCcccCCc--EEEEec--CCEEEEEECCCChhcCEEEEEEEE
Confidence 66766677788999999999999999999999999999 776543 222222 223789999999999999999999
Q ss_pred cccccceecceEEEEe
Q psy2441 191 NEVGTEYSPSTMLYVK 206 (212)
Q Consensus 191 n~~g~~~~~~~~l~v~ 206 (212)
|..|..... +.|.|+
T Consensus 79 N~~G~~~~~-~~l~V~ 93 (93)
T 1wit_A 79 NELGEDEAI-FEVIVQ 93 (93)
T ss_dssp ETTEEEEEE-EEEEEC
T ss_pred cCCCeEEEE-EEEEEC
Confidence 999988766 776663
No 186
>3puc_A Titin; I-SET IG-like domain, M-BAND, transferase; 0.96A {Homo sapiens}
Probab=99.72 E-value=7e-17 Score=98.37 Aligned_cols=92 Identities=23% Similarity=0.398 Sum_probs=77.9
Q ss_pred CccccCCcceeEecCCcEEEEEeeeeCCCCceEEEeCCEEecCCCCCceEEcCCCCceeEEEcCCCCCCCeeEEEEEEcc
Q psy2441 113 PQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREMLPVDTSRNPRYNLLTSGAPGALQITNSIEEDQGKYECVAENE 192 (212)
Q Consensus 113 p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~n~ 192 (212)
|.+...+....+.+|+.+.|.|.+.+.|.|.+.|++++..+... .++....++....|.|.++..+|+|.|.|.|.|.
T Consensus 7 P~i~~~~~~~~v~~G~~~~l~C~~~g~p~p~v~W~~~g~~~~~~--~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~ 84 (99)
T 3puc_A 7 PVIVTGLQDTTVSSDSVAKFAVKATGEPRPTAIWTKDGKAITQG--GKYKLSEDKGGFFLEIHKTDTSDSGLYTCTVKNS 84 (99)
T ss_dssp EEEEECCCCEEEESSSCEEEEEEEEEESCCEEEEEETTEECCSS--SSEEEEEETTEEEEEECSCCGGGCEEEEEEEEET
T ss_pred CEEEecCccEEEeCCCcEEEEEEEEecCCCEEEEEECCEECcCC--CCEEEEEeCCEEEEEECCCCcccCEEEEEEEEeC
Confidence 66667777788999999999999999999999999999988764 5555555444468999999999999999999999
Q ss_pred cccceecceEEEEec
Q psy2441 193 VGTEYSPSTMLYVKG 207 (212)
Q Consensus 193 ~g~~~~~~~~l~v~~ 207 (212)
.|..... +.|.|++
T Consensus 85 ~g~~~~~-~~l~V~~ 98 (99)
T 3puc_A 85 AGSVSSS-CKLTIKA 98 (99)
T ss_dssp TEEEEEE-EEEEEEC
T ss_pred CCcEeEE-EEEEEEe
Confidence 9998777 8888764
No 187
>2eo9_A Roundabout homolog 1; beta-sandwich, IG-fold, H-ROBO-1, deleted in U twenty twenty, neurogenesis, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.72 E-value=4e-17 Score=102.79 Aligned_cols=95 Identities=32% Similarity=0.536 Sum_probs=80.9
Q ss_pred CCccccCCcceeEecCCcEEEEEeeeeCCCCceEEEeCCEEecCCCCCceEEcCCCCceeEEEcCCCCCCCeeEEEEEEc
Q psy2441 112 FPQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREMLPVDTSRNPRYNLLTSGAPGALQITNSIEEDQGKYECVAEN 191 (212)
Q Consensus 112 ~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~n 191 (212)
+|.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+... ..++....+ +.|.|.++..+|+|.|.|.|.|
T Consensus 8 pP~i~~~p~~~~v~~G~~v~l~C~~~g~p~p~i~W~k~g~~~~~~-~~~~~~~~~---~~L~i~~v~~~D~G~Y~C~a~n 83 (118)
T 2eo9_A 8 PPVIRQGPVNQTVAVDGTFVLSCVATGSPVPTILWRKDGVLVSTQ-DSRIKQLEN---GVLQIRYAKLGDTGRYTCIAST 83 (118)
T ss_dssp SCCCSBCCCCEEEETTCEEEEECBCCCSSCCEEEEEESSSBCCTT-STTEEEEET---TEEEEESCCGGGCCCEEEEEEC
T ss_pred CCEEEcCCCCEEEcCCCeEEEEEEEEecCCCEEEEEECCEECcCC-CCeEEEccC---CEEEEccCCcCCCEEEEEEEEc
Confidence 477777888888999999999999999999999999999887653 355555555 6899999999999999999999
Q ss_pred ccccceecceEEEEecceec
Q psy2441 192 EVGTEYSPSTMLYVKGTQVD 211 (212)
Q Consensus 192 ~~g~~~~~~~~l~v~~~~~p 211 (212)
..|..... +.|.|.+...|
T Consensus 84 ~~g~~~~~-~~l~V~~~~~p 102 (118)
T 2eo9_A 84 PSGEATWS-AYIEVQEFGVP 102 (118)
T ss_dssp SSCEEEEE-CCEEEECCSCC
T ss_pred CCCcEEEE-EEEEEEeCCCC
Confidence 99998777 88888876554
No 188
>3qib_D 2B4 beta chain; IG domain, immune system; HET: NAG FUC BMA; 2.70A {Mus musculus}
Probab=99.72 E-value=7e-17 Score=116.05 Aligned_cols=182 Identities=15% Similarity=0.209 Sum_probs=97.0
Q ss_pred ceeeEEEeeccCCCcceecccccCCCCCeEEeCCCccEEeeCCeEEEEcccCCCCCCcEEEEeC--CEE-----------
Q psy2441 3 IGTYIKIKPNLFSPLSVYSADKIPPGFPQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIRE--MLP----------- 69 (212)
Q Consensus 3 ~g~Y~C~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~k~--g~~----------- 69 (212)
.+.|.|.+.+..+..... ....+...|..+.+.+|++++|.|.+.+ +.+.+.|||. +..
T Consensus 8 ~~~y~~~~~~~~g~~~~~-------~~~~v~~~p~~v~v~~G~~v~L~C~~~~-~~~~v~W~k~~~~~~~~~~~~~~~~~ 79 (270)
T 3qib_D 8 LIAYLKQATKGGGGSGGG-------GGMKVIQTPRYLVKGQGQKAKMRCIPEK-GHPVVFWYQQNKNNEFKFLINFQNQE 79 (270)
T ss_dssp ---------------------------CCCEEECSEEEEETTSCEEEEEECCT-TCCEEEEEEECTTCCEEEEEEEETTE
T ss_pred HHHHHHHHhccCCccccc-------cceeEEeCCCeEEEcCCCCEEEEEEecC-CCceEEEEEECCCCCcEEEEEECCCC
Confidence 467999998876643322 3445566777889999999999999865 6678999982 110
Q ss_pred -ecCC-CCC-eeEE------------eec--CCCCeEEEeeeC----------CccceeEEeecCCCCCCCcccc-CCcc
Q psy2441 70 -VDTS-RNP-RYNL------------LTS--GAPGTYIKIKPN----------LFSPLSVYSADKIPPGFPQITE-APST 121 (212)
Q Consensus 70 -l~~~-~~~-~~~~------------~~~--~~~g~~l~i~~~----------~~~~~~v~~~~~~~~~~p~~~~-~~~~ 121 (212)
.... ... |+.+ ... .|.|.|.|.... ....+.|..... ...+|.+.. .+..
T Consensus 80 ~~~~~~~~~~r~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~-~~~~P~v~~~~~~~ 158 (270)
T 3qib_D 80 VLQQIDMTEKRFSAECPSNSPCSLEIQSSEAGDSALYLCASSLNWSQDTQYFGPGTRLLVLEDLK-NVFPPEVAVFEPSE 158 (270)
T ss_dssp EEEECHHHHHHEEEECCTTSCEEEEESSCCGGGCEEEEEEEESCTTCCCCEECCCEEEEEESCST-TCBCCEEEEEECCH
T ss_pred ceecCCccCCcEEEEeCCCcEEEEEECCCCHhHCeEEEEEEecCCCccceEECCcEEEEEccccc-cccCCceEEECCCc
Confidence 0000 000 3332 222 377888887663 112333332110 111243332 2222
Q ss_pred eeEecCCcEEEEEeeee-CCCC-ceEEEeCCEEecCCCCCceE------Ec--CCCC---ceeEEEcCCCCCC-CeeEEE
Q psy2441 122 KVVEISHTTVLHCSASG-NPPP-KISWIREMLPVDTSRNPRYN------LL--TSGA---PGALQITNSIEED-QGKYEC 187 (212)
Q Consensus 122 ~~~~~g~~~~l~C~~~~-~p~~-~i~W~~~~~~~~~~~~~~~~------~~--~~~~---~~~l~i~~~~~~d-~g~y~C 187 (212)
..+..|+.+.|.|.+.+ .|.+ .+.|++++..+... .... .. .++. ...|.|.....+| .|.|+|
T Consensus 159 ~~~~~g~~v~L~C~~~g~~P~~~~v~W~k~g~~l~~~--~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~~g~YtC 236 (270)
T 3qib_D 159 AEISHTQKATLVCLATGFYPDHVELSWWVNGKEVHSG--VCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRC 236 (270)
T ss_dssp HHHHHHSEEEEEEEEEEEBSSCEEEEEEETTEEECTT--EEECSSCEESCTTSSSCCEEEEEEEEEEHHHHHSTTCEEEE
T ss_pred cccccCCceEEEEEecceeCCCeEEEEEECCEECCCC--cccccccccccccCCCCCEEEEEEEEEcHHHhccCCCeEEE
Confidence 33455999999999988 6666 89999999988653 1100 00 1111 2456777777777 999999
Q ss_pred EEEccccc
Q psy2441 188 VAENEVGT 195 (212)
Q Consensus 188 ~a~n~~g~ 195 (212)
.|.|....
T Consensus 237 ~v~~~~l~ 244 (270)
T 3qib_D 237 QVQFYGLS 244 (270)
T ss_dssp EEEECCBC
T ss_pred EEEecCCC
Confidence 99987554
No 189
>1c1e_H Catalytic antibody 1E9 (heavy chain); diels-alder, immunoglobulin, immune system; HET: ENH; 1.90A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1dbb_H* 1dba_H* 1dbj_H* 1dbk_H* 1dbm_H* 2dbl_H* 3ojd_B 1jgl_H* 1jhk_H 1ghf_H 1tet_H* 3e8u_H 1fj1_B 1cl7_H
Probab=99.72 E-value=2.4e-17 Score=114.85 Aligned_cols=158 Identities=15% Similarity=0.274 Sum_probs=96.4
Q ss_pred CCCccEEeeCCeEEEEcccCCCC--CCcEEEEeC--CEEec------C---------CCCCeeEEee-------------
Q psy2441 35 APSTKVVEISHTTVLHCSASGNP--PPKISWIRE--MLPVD------T---------SRNPRYNLLT------------- 82 (212)
Q Consensus 35 ~~~~~~v~~g~~v~l~C~~~~~p--~~~v~W~k~--g~~l~------~---------~~~~~~~~~~------------- 82 (212)
.|....+.+|+++.|.|.+.+.+ .+.+.|||+ |..+. . ....|+.+..
T Consensus 6 ~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~ 85 (219)
T 1c1e_H 6 QSGPELKKPGETVKISCKASGYMFTNYGMNWVKQAPGKALKLMGWINPYTGESTFADDFKGRFAFFLETSATTAYLQINN 85 (219)
T ss_dssp ECCCEEECTTCCEEEEEEEESSCGGGSEEEEEEECTTSCEEEEEEECSSSCCEEECGGGCSSEEEEEEGGGTEEEEEECS
T ss_pred CCCCeEecCCCcEEEEEEEeCcccccceEEEEEeCCCCCcEEEEEEecCCCceEeCcccCCcEEEEEecCCCEEEEEECC
Confidence 35567899999999999998765 578999996 33221 0 0123443321
Q ss_pred c--CCCCeEEEeeeCCc----------cceeEEeecCCCCCCCccccCCcceeEecCCcEEEEEeeee-CCCC-ceEEEe
Q psy2441 83 S--GAPGTYIKIKPNLF----------SPLSVYSADKIPPGFPQITEAPSTKVVEISHTTVLHCSASG-NPPP-KISWIR 148 (212)
Q Consensus 83 ~--~~~g~~l~i~~~~~----------~~~~v~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~-~p~~-~i~W~~ 148 (212)
. .|.|.|.|...... ..+.|.. .++.+|.+...+....+.+|+.+.|.|.+.+ .|.| .+.|++
T Consensus 86 v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~---~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~ 162 (219)
T 1c1e_H 86 LKNEDMATYFCARGTTIVRAMDYWGQGTSLTVSS---AKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNS 162 (219)
T ss_dssp CCGGGCEEEEEEEEETTTTEEEEECCCEEEEECC---CCCBCCEEEEECCCSSSCCSSEEEEEEEEEEEBSSCCEEEEGG
T ss_pred CCcccCEEEEEEEeccCcccceeecCceEEEEec---CCCCCCeEEEecCccccccCCeEEEEEEcccccCCCeEEEEEe
Confidence 1 37888888766532 1222221 1122344443332233567999999999998 8988 999999
Q ss_pred CCEEecCCCCCceEEcCCCC---ceeEEEcCCCCCCCeeEEEEEEccccccee
Q psy2441 149 EMLPVDTSRNPRYNLLTSGA---PGALQITNSIEEDQGKYECVAENEVGTEYS 198 (212)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~---~~~l~i~~~~~~d~g~y~C~a~n~~g~~~~ 198 (212)
++..+......... .++. .+.|.|..... |.|.|+|.|.|..|....
T Consensus 163 ~g~~~~~~~~~~~~--~~~~~~~~s~L~i~~~~~-d~g~Y~C~a~n~~~~~~~ 212 (219)
T 1c1e_H 163 GSLSSGVHTFPAVL--QSDLYTLSSSVTVPSSPR-PSETVTCNVAHPASSTKV 212 (219)
T ss_dssp GTBCTTEEECCCEE--SSSCEEEEEEEEEESSST-TTSCCEEEEEEGGGTEEE
T ss_pred CCcccceEecCCcc--cCCeEEEEEEEEEecccC-CCCEEEEEEEeCCCCccE
Confidence 98764211011110 1111 24688854444 569999999998876543
No 190
>2vol_A Murine IGG FC; FC, zinc, B30.2, nucleus, pryspry, cytoplasm, mouse IGG, zinc-finger, DNA-binding, RNA-binding, tripartite motif (TRIM) protein; HET: NAG MAN GAL FUC; 1.95A {Mus musculus} PDB: 3hkf_A 1i1a_C* 1cqk_A
Probab=99.72 E-value=9e-17 Score=111.06 Aligned_cols=161 Identities=19% Similarity=0.282 Sum_probs=97.2
Q ss_pred eCCCccE-EeeCCeEEEEcccCCCC---C-CcEEEEeCCEEecCC--------CCCee------EEeec--CCCCeEEEe
Q psy2441 34 EAPSTKV-VEISHTTVLHCSASGNP---P-PKISWIREMLPVDTS--------RNPRY------NLLTS--GAPGTYIKI 92 (212)
Q Consensus 34 ~~~~~~~-v~~g~~v~l~C~~~~~p---~-~~v~W~k~g~~l~~~--------~~~~~------~~~~~--~~~g~~l~i 92 (212)
..|.... +.+|+++.|.|.+.+.+ . ..|.|+|++..+... ...++ .+... +|.|.|.|.
T Consensus 7 ~~P~~~~~v~~G~~v~L~C~~~g~~~~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~ 86 (207)
T 2vol_A 7 FPPKPKDVLTITLTPKVTCVVVDISKDDPEVQFSWFVDDVEVHTAQTKPREEQFNSTFRSVSELPIMHQDWLNGKEFKCR 86 (207)
T ss_dssp ECCCHHHHHSTTSCCEEEEEEEEECTTCCCCEEEEEETTEEECCCEEECCCEETTTEEEEEEEEECCHHHHHTTCCEEEE
T ss_pred eCcChhhhhccCCceEEEEEEeCcccCCCceEEEEEECCccccccccCCCcCcCCCcEEEEEEEEEehhHcCCCCEEEEE
Confidence 4555444 88999999999998764 2 489999999776431 01222 12111 388999998
Q ss_pred eeCCccc--e--eEEeecCCCCCCCccccCCcceeEecCCcEEEEEeeeeC-CC-CceEEEeCCEEecCCCCCceEEcCC
Q psy2441 93 KPNLFSP--L--SVYSADKIPPGFPQITEAPSTKVVEISHTTVLHCSASGN-PP-PKISWIREMLPVDTSRNPRYNLLTS 166 (212)
Q Consensus 93 ~~~~~~~--~--~v~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~-p~-~~i~W~~~~~~~~~~~~~~~~~~~~ 166 (212)
....... . .+... .....+|.+...+.......|+.+.|.|.+.+. |. +.+.|++++..+......+.....+
T Consensus 87 a~~~~~~~~~~~~v~~~-~~~~~~P~v~~~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~ 165 (207)
T 2vol_A 87 VNSAAFPAPIEKTISKT-KGRPKAPQVYTLPPPKEQMAKDKVSLTCMITDFFPEDITVEWESNGQPAENYKNTQPIMDTD 165 (207)
T ss_dssp EECTTCSSCEEEEECCC-CCCCBCCEEEEECCCTGGGSSSEEEEEEEEEEEBSSCCEEEEEETTEECSCEEECCCEECTT
T ss_pred EEccCCCCceEEEeccC-CCCCcCCeEEEeCCCHHHhcCCceEEEEEEeeEECCCCEEEEEECCEeccCcccCCceECCC
Confidence 8874332 1 22110 011223555443332222358999999999884 55 3899999998775421111112222
Q ss_pred CC---ceeEEEcCCCCCCCeeEEEEEEccccc
Q psy2441 167 GA---PGALQITNSIEEDQGKYECVAENEVGT 195 (212)
Q Consensus 167 ~~---~~~l~i~~~~~~d~g~y~C~a~n~~g~ 195 (212)
+. .+.|.+.....+|.|.|+|.|.|....
T Consensus 166 g~~~~~s~l~i~~~~~~~~g~ytC~a~n~~l~ 197 (207)
T 2vol_A 166 GSYFVYSKLNVQKSNWEAGNTFTCSVLHEGLH 197 (207)
T ss_dssp SCEEEEEEEEEEHHHHSSCCEEEEEEECTTSG
T ss_pred CCEEEEEEEEECHHHcCCCCEEEEEEECCCCC
Confidence 11 134566656667899999999997543
No 191
>2kkq_A Myotilin; unknown function, actin-binding, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=99.72 E-value=1.3e-16 Score=100.04 Aligned_cols=97 Identities=29% Similarity=0.375 Sum_probs=80.9
Q ss_pred CCccccCCcceeEecCCcEEEEEeeeeCCCCceEEEeCCEEecCCCCCceEEcCCC-CceeEEEcCCCCCCCeeEEEEEE
Q psy2441 112 FPQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREMLPVDTSRNPRYNLLTSG-APGALQITNSIEEDQGKYECVAE 190 (212)
Q Consensus 112 ~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~-~~~~l~i~~~~~~d~g~y~C~a~ 190 (212)
+|.|...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+... ..++....++ +..+|.|.++..+|+|.|.|.|.
T Consensus 15 ~p~f~~~p~~~~v~~G~~v~L~C~~~g~p~p~v~W~k~~~~~~~~-~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~ 93 (116)
T 2kkq_A 15 APMFIYKPQSKKVLEGDSVKLECQISAIPPPKLFWKRNNEMVQFN-TDRISLYQDNTGRVTLLIKDVNKKDAGWYTVSAV 93 (116)
T ss_dssp CCCBSSCCCCEEEETTEEEEEEEEBCCBSCCEEEEEETTEECCCC-BTTEEEEECTTCEEEEEEEEECGGGCEEEEEEEE
T ss_pred CCeEEeCCCcEEEeCCCcEEEEEEEeccCCCEEEEEECCEECcCC-CCeEEEEeCCCCeEEEEECCCCcccCEEEEEEEE
Confidence 478888888899999999999999999999999999999888753 3455554432 23489999999999999999999
Q ss_pred cccccceecceEEEEeccee
Q psy2441 191 NEVGTEYSPSTMLYVKGTQV 210 (212)
Q Consensus 191 n~~g~~~~~~~~l~v~~~~~ 210 (212)
|..|..... +.|.|...+.
T Consensus 94 N~~G~~~~~-~~l~V~~~p~ 112 (116)
T 2kkq_A 94 NEAGVTTCN-TRLDVTARPN 112 (116)
T ss_dssp ETTEEEEEE-EEEEEECCSC
T ss_pred cCCCeEEEE-EEEEEeCCCC
Confidence 999998777 8888877654
No 192
>3irg_B Obscurin-like protein 1; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_B 2wp3_O* 2wwm_C 2wwk_O
Probab=99.71 E-value=7.5e-17 Score=99.66 Aligned_cols=94 Identities=27% Similarity=0.458 Sum_probs=78.0
Q ss_pred CCccccCCcceeEecCCcEEEEEeeeeCCCCceEEEeCCEEecCCCCCceEEcCCCCceeEEEcCCCCCCCeeEEEEEEc
Q psy2441 112 FPQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREMLPVDTSRNPRYNLLTSGAPGALQITNSIEEDQGKYECVAEN 191 (212)
Q Consensus 112 ~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~n 191 (212)
+|.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+... .++....++....|.|.++..+|+|.|.|.|.|
T Consensus 13 ~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~i~W~~~~~~~~~~--~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n 90 (107)
T 3irg_B 13 PPCFLRFPRPVRVVSGAEAELKCVVLGEPPPVVVWEKGGQQLAAS--ERLSFPADGAEHGLLLTAALPTDAGVYVCRARN 90 (107)
T ss_dssp EEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCC--SSEECCEETTEEEEEESSCCGGGCEEEEEEEEE
T ss_pred CCeeEcCCccEEEeCCCeEEEEEEEeecCCCEEEEEECCeECCCC--CcEEEEeCCCEEEEEEccCCHHhCEEEEEEEEc
Confidence 377777777888999999999999999999999999999888764 555555454345899999999999999999999
Q ss_pred ccccceecceEEEEecc
Q psy2441 192 EVGTEYSPSTMLYVKGT 208 (212)
Q Consensus 192 ~~g~~~~~~~~l~v~~~ 208 (212)
..|..... +.|.|.++
T Consensus 91 ~~g~~~~~-~~l~V~~~ 106 (107)
T 3irg_B 91 AAGEAYAA-AAVTVLEP 106 (107)
T ss_dssp TTEEEEEE-EEEEEEC-
T ss_pred CCCcEEEE-EEEEEEcC
Confidence 99988766 77777654
No 193
>2znx_A SCFV; fluorotryptohpan, 5-fluorotryptophan, 19F, single chain FV, allergen, antimicrobial, bacteriolytic enzyme, glycosidase, hydrolase; HET: FTR 1PG; 2.30A {Homo sapiens} PDB: 2znw_A*
Probab=99.71 E-value=3.5e-16 Score=110.62 Aligned_cols=166 Identities=20% Similarity=0.256 Sum_probs=102.3
Q ss_pred eEEeCCCccEEeeCCeEEEEcccCCCCCCcEEEEeCC--E---Eec-------CCCCCeeEEe-----------ec--CC
Q psy2441 31 QITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREM--L---PVD-------TSRNPRYNLL-----------TS--GA 85 (212)
Q Consensus 31 ~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~k~g--~---~l~-------~~~~~~~~~~-----------~~--~~ 85 (212)
.+...|..+.+.+|++++|.|.+.+.|.+.+.|||+. . .+. .....|+.+. .. .|
T Consensus 3 ~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D 82 (242)
T 2znx_A 3 VLTQSPATLSVTPGNSVSLSCRASQSIGNNLHXYQQKSHESPRLLIKYASQSISGIPSRFSGSGSGTDFTLSINSVETED 82 (242)
T ss_dssp CEEEECSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGGG
T ss_pred cEEEcCCeEEEcCCCcEEEEEEeCCCCCceEEEEEeCCCCCceEEEEeccccCCCCCCCEEEecCCCEEEEEECCCChHH
Confidence 4566778889999999999999999888899999952 1 111 0011344332 11 37
Q ss_pred CCeEEEeeeCCc-------cceeEEeecCC------CCCCCccccCCcceeEecCCcEEEEEeeeeCC--CCceEEEeCC
Q psy2441 86 PGTYIKIKPNLF-------SPLSVYSADKI------PPGFPQITEAPSTKVVEISHTTVLHCSASGNP--PPKISWIREM 150 (212)
Q Consensus 86 ~g~~l~i~~~~~-------~~~~v~~~~~~------~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p--~~~i~W~~~~ 150 (212)
.|.|.|...... ..+.|...... ...++.....+....+.+|+.+.|.|.+.+.+ .+.+.|+++.
T Consensus 83 ~G~Y~C~~~n~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~k~~ 162 (242)
T 2znx_A 83 FGMYFCQQSNSXPYTFGGGTKLEITGGGGSGGGGSGGGGSDIQLQESGPSLVKPSQTLSLTCSVTGDSITSDYXSXIRKF 162 (242)
T ss_dssp CEEEEEEECSSSSCEECCCEEEEEC---------------CCEEEEECCSEECTTSCEEEEEEEESSCGGGSCEEEEEEC
T ss_pred CEEEEEeEecCCceEECCCEEEEEcCCCCCCcccccccccceeeecCCcceecCCCeEEEEEEEEccccCCcceeeEeeC
Confidence 888888776531 22333221100 00011122223334588999999999998876 4789999842
Q ss_pred --EEec------CC--------CCCceEEcC--CCCceeEEEcCCCCCCCeeEEEEEEcc--cccc
Q psy2441 151 --LPVD------TS--------RNPRYNLLT--SGAPGALQITNSIEEDQGKYECVAENE--VGTE 196 (212)
Q Consensus 151 --~~~~------~~--------~~~~~~~~~--~~~~~~l~i~~~~~~d~g~y~C~a~n~--~g~~ 196 (212)
..+. .. ...++.... .....+|.|.++..+|+|.|.|.|.|. .|..
T Consensus 163 ~~~~~~~l~~~~~~g~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~~~~fG~g 228 (242)
T 2znx_A 163 PGNRLEYMGYVSYSGSTYYNPSLKSRISITRDTSKNQYYLDLNSVTTEDTATYYCANXDGDYXGQG 228 (242)
T ss_dssp TTSCEEEEEEECTTSCEEECGGGTTCEEEEEETTTTEEEEEECSCCGGGCEEEEEEETTSSCBCCC
T ss_pred CCCCcEEEEEEecCCccccCccccCcEEEEecCCCCEEEEEECCCCcCcCEEEEEeccCCcccCCC
Confidence 2211 00 123444432 222468999999999999999999984 4544
No 194
>4fqp_A Poliovirus receptor; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA FUC MAN; 3.60A {Homo sapiens} PDB: 1nn8_R 1dgi_R
Probab=99.71 E-value=1.2e-16 Score=117.15 Aligned_cols=170 Identities=15% Similarity=0.213 Sum_probs=106.1
Q ss_pred EeCCCccEEeeCCeEEEEcccCCCCCC-----cEEEEeCCEEec-------------CCC--------------CCeeEE
Q psy2441 33 TEAPSTKVVEISHTTVLHCSASGNPPP-----KISWIREMLPVD-------------TSR--------------NPRYNL 80 (212)
Q Consensus 33 ~~~~~~~~v~~g~~v~l~C~~~~~p~~-----~v~W~k~g~~l~-------------~~~--------------~~~~~~ 80 (212)
...|..+.+..|++++|.|.+.+.+.+ .|.|+|+|.... ... +..+.+
T Consensus 4 v~~P~~v~~~~G~~v~L~C~v~~~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~sL~I 83 (313)
T 4fqp_A 4 VQAPTQVPGFLGDSVTLPCYLQVPNMEVTHVSQLTWARHGESGSMAVFHQTQGPSYSESKRLEFVAARLGAELRNASLRM 83 (313)
T ss_dssp EECCSEECCBTTSCEEECCEEECCTTSCCCCCEEEEEETTSSSCSEEEETTTEEEESSTTTEEESSCCTTSCCCBCCEEE
T ss_pred EcCCCEEEEecCCCEEEEEEEECCCCCccceEEEEEEECCCCcceEEEecCCCceeccCcceEEEeeccCCcccceEEEE
Confidence 456777888899999999999776554 489999874311 110 011333
Q ss_pred eec--CCCCeEEEeeeC-C--ccceeEEeecCCCCCCCccccCCcceeEecCCcEEEEEee-eeCCCCceEEEeCCEEec
Q psy2441 81 LTS--GAPGTYIKIKPN-L--FSPLSVYSADKIPPGFPQITEAPSTKVVEISHTTVLHCSA-SGNPPPKISWIREMLPVD 154 (212)
Q Consensus 81 ~~~--~~~g~~l~i~~~-~--~~~~~v~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~-~~~p~~~i~W~~~~~~~~ 154 (212)
... +|.|.|.|.... . .....+..... ..|.+........+..++.+.+.|.+ .+.|.+.+.|++++..+.
T Consensus 84 ~~v~~~D~G~Y~C~v~~~~~~~~~~~~~l~v~---~~P~~~~~~~~~~~~~~~~~~~~C~~~~~~P~~~i~W~~~~~~~~ 160 (313)
T 4fqp_A 84 FGLRVEDEGNYTCLFVTFPQGSRSVDIWLRVL---AKPQNTAEVQKVQLTGEPVPMARCVSTGGRPPAQITWHSDLGGMP 160 (313)
T ss_dssp CSCCGGGCEEEEEEEECSSSCEEEEEEEECCB---BCCEEEEEECCBCCCSSCEEEEEEEEEEEBSCCEEEEEETTCCEE
T ss_pred CcCChhhCEEEEEEEeeccCcceeeeeeeeec---cCCcceecccceEeecCceEEEEEEccCccCCcEEEeecCCcccc
Confidence 322 478888886533 1 11122221111 12444444444556678888999987 478999999999987665
Q ss_pred CCCCCceEEcCCCC---ceeEEEcCCCCCCCeeEEEEEEcccccceecceEEEEecc
Q psy2441 155 TSRNPRYNLLTSGA---PGALQITNSIEEDQGKYECVAENEVGTEYSPSTMLYVKGT 208 (212)
Q Consensus 155 ~~~~~~~~~~~~~~---~~~l~i~~~~~~d~g~y~C~a~n~~g~~~~~~~~l~v~~~ 208 (212)
.. .......++. .+.|.|.....+|.|.|+|.|.|..+..... ..+.+.+.
T Consensus 161 ~~--~~~~~~~~~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~-~~~~l~V~ 214 (313)
T 4fqp_A 161 NT--SQVPGFLSGTVTVTSLWILVPSSQVDGKNVTCKVEHESFEKPQL-LTVNLTVY 214 (313)
T ss_dssp EE--EEEECSSTTCEEEEEEEEECCCGGGTTCEEEEEEECTTSSSCEE-EEEECCBC
T ss_pred cc--ceeeeecccccccceeeeecccccccCeeEEEEEEccCcCccce-eeeecccc
Confidence 42 1221122211 2468899999999999999999987766554 44444443
No 195
>2yuz_A Myosin-binding protein C, SLOW-type; immunoglobulin domain, SLOW-type myosin-binding protein C, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.71 E-value=1.7e-16 Score=96.79 Aligned_cols=92 Identities=22% Similarity=0.333 Sum_probs=76.2
Q ss_pred CCccccCCcceeEecCCcEEEEEeeeeCCCCceEEEeCCEEecCCCCCceEEcCCCCceeEEEcCCCCCCCeeEEEEEEc
Q psy2441 112 FPQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREMLPVDTSRNPRYNLLTSGAPGALQITNSIEEDQGKYECVAEN 191 (212)
Q Consensus 112 ~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~n 191 (212)
+|.|...+.+..+.+|+.+.|.|.+ .|.|.+.|++++..+... .++.+..++....|.|.++..+|+|.|.|.|.|
T Consensus 7 p~~~~~~~~~~~v~~G~~v~l~C~v--~p~p~v~W~k~g~~l~~~--~r~~i~~~~~~~~L~I~~v~~~D~G~Y~C~a~N 82 (100)
T 2yuz_A 7 GLKILTPLTDQTVNLGKEICLKCEI--SENIPGKWTKNGLPVQES--DRLKVVQKGRIHKLVIANALTEDEGDYVFAPDA 82 (100)
T ss_dssp CCCCSBCCCCEEEETTSCCCEEEEC--SSCCCEEEEETTEECCCC--SSEEEEECSSEEEEEESSCCGGGCSEEEEEESS
T ss_pred CCEEeccCCceEEcCCCCEEEEEEe--CCCCeEEEEECCEECCCC--CcEEEEEeCCEEEEEECCCChhhCEEEEEEEcC
Confidence 4777778888899999999999999 888999999999998764 566666665556899999999999999999999
Q ss_pred ccccceecceEEEEeccee
Q psy2441 192 EVGTEYSPSTMLYVKGTQV 210 (212)
Q Consensus 192 ~~g~~~~~~~~l~v~~~~~ 210 (212)
. ..... +.|.|.+++.
T Consensus 83 ~--~~~~~-a~L~V~~~P~ 98 (100)
T 2yuz_A 83 Y--NVTLP-AKVHVISGPS 98 (100)
T ss_dssp S--CCCEE-EEEEEECCSC
T ss_pred C--CeeEE-EEEEEeCCCC
Confidence 7 34444 7788877653
No 196
>2j6e_L IGM, FAB light chain; autoimmune complex human IGM rheumatoid factor IGG1-FC, immunoglobulin C region, membrane, glycoprotein, transmembrane; HET: NAG FUL BMA MAN NDG GAL; 3.0A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=99.71 E-value=4.2e-17 Score=114.64 Aligned_cols=164 Identities=17% Similarity=0.242 Sum_probs=100.3
Q ss_pred CeEEeCCCccEEeeCCeEEEEcccCCCCC-C-cEEEEeCC--EEe----------cCCCCCeeEEe-----------ec-
Q psy2441 30 PQITEAPSTKVVEISHTTVLHCSASGNPP-P-KISWIREM--LPV----------DTSRNPRYNLL-----------TS- 83 (212)
Q Consensus 30 p~~~~~~~~~~v~~g~~v~l~C~~~~~p~-~-~v~W~k~g--~~l----------~~~~~~~~~~~-----------~~- 83 (212)
+.+.. |....+.+|+++.|.|.+.+.+. + .+.|||++ ..+ ......|+.+. ..
T Consensus 21 ~~v~~-p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~ 99 (234)
T 2j6e_L 21 SVLTQ-PPSASGTPGQRVTISCSGSSSNIGSNYVYWYQQLPGTAPKLLIYRNNQRPSGVPDRFSGSKSGTSASLAISGLR 99 (234)
T ss_dssp CCCBC-CSCCCBCTTCEEEEEEECCTTTTTTSCCEEEEECSSSCCEEEEBTTTBCCSSSCTTEEEEEETTEEEEEEESCC
T ss_pred cEEeC-CCcEEeeCCCcEEEEEEecCCCCCCCeEEEEEecCCCCcEEEEECccccCCCccccEEEEecCCeEEEEECCCC
Confidence 33344 67788999999999999987543 4 69999963 221 00111333322 22
Q ss_pred -CCCCeEEEeeeCCcc---------ceeEEeecCCCCCCCccccCCcceeEecCCcEEEEEeeeeCCC--CceEEEeCCE
Q psy2441 84 -GAPGTYIKIKPNLFS---------PLSVYSADKIPPGFPQITEAPSTKVVEISHTTVLHCSASGNPP--PKISWIREML 151 (212)
Q Consensus 84 -~~~g~~l~i~~~~~~---------~~~v~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~--~~i~W~~~~~ 151 (212)
+|.|.|.|....... .+.|... +..+|.+...+....+.+|+.+.|.|.+.+.++ +.+.|++++.
T Consensus 100 ~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~---~~~~p~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~ 176 (234)
T 2j6e_L 100 SEDEADYYCATWDDSLSAVIFGGGTKLTVLGQ---PKAAPSVTLFPPSSEELQANKATLVCLISDFFPGAVTVAWKADGA 176 (234)
T ss_dssp STTCSEEEEEEEETTTTEEEECCCBCCCBCCC---CCCCCCCCEECCCHHHHTTSCCCEEECCCBCSSCCCEEEEEETTE
T ss_pred HHHCEEEEEEEEcCCcceeEecCCEEEEEecC---CCCCCcccccCCChhHhcCCceEEEEEEEEEcCCceEEEEEECCE
Confidence 488888887765322 2222211 112354444332222335889999999988543 3899999998
Q ss_pred EecCCCC-CceEEcCCC---CceeEEEcCCCCCCCeeEEEEEEcccccce
Q psy2441 152 PVDTSRN-PRYNLLTSG---APGALQITNSIEEDQGKYECVAENEVGTEY 197 (212)
Q Consensus 152 ~~~~~~~-~~~~~~~~~---~~~~l~i~~~~~~d~g~y~C~a~n~~g~~~ 197 (212)
.+..... .......++ ..+.|.|.++..+|.|.|+|.|.|..+...
T Consensus 177 ~l~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~ 226 (234)
T 2j6e_L 177 PVKAGVETTKPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVE 226 (234)
T ss_dssp ECCSSEEECCCCCCTTSCCBCCEEECCCGGGTTTSCCEEEEEEBTTBCCC
T ss_pred ECCCCccccCceECCCCCEEEEEEEEECHHHcCCCCeEEEEEEeCCCceE
Confidence 8764300 000001111 125788999999999999999999877643
No 197
>1moe_A Anti-CEA MAB T84.66; anti carcinoembryonic antigen, diabody, dimer, SCFV, variable domain, immune system; 2.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=99.71 E-value=1.4e-15 Score=107.29 Aligned_cols=160 Identities=18% Similarity=0.277 Sum_probs=101.9
Q ss_pred eEEeCCCccEEeeCCeEEEEcccCCCC----CCcEEEEeCC--EE---ec-------CCCCCeeEE-----------eec
Q psy2441 31 QITEAPSTKVVEISHTTVLHCSASGNP----PPKISWIREM--LP---VD-------TSRNPRYNL-----------LTS 83 (212)
Q Consensus 31 ~~~~~~~~~~v~~g~~v~l~C~~~~~p----~~~v~W~k~g--~~---l~-------~~~~~~~~~-----------~~~ 83 (212)
.+...|....+.+|+.+.|.|.+.+.| .+.+.|||++ .. +. .....|+.+ ...
T Consensus 3 ~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v 82 (240)
T 1moe_A 3 VLTQSPASLAVSLGQRATMSCRAGESVDIFGVGFLHWYQQKPGQPPKLLIYRASNLESGIPVRFSGTGSRTDFTLIIDPV 82 (240)
T ss_dssp CEEEECSEEEECTTSCEEEEEEESSCCEETTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSC
T ss_pred ceEeeCCeEEecCCCCEEEEEeCCCccccCCCceEEEEEECCCCCceEEEEEecccCcCCCccEEEEecCCeEEEEEcCC
Confidence 455677788999999999999999887 7789999952 11 11 001233333 222
Q ss_pred --CCCCeEEEeeeCCc-------cceeEEeecCCCCCCCccccCCcceeEecCCcEEEEEeeeeCCC--CceEEEeC--C
Q psy2441 84 --GAPGTYIKIKPNLF-------SPLSVYSADKIPPGFPQITEAPSTKVVEISHTTVLHCSASGNPP--PKISWIRE--M 150 (212)
Q Consensus 84 --~~~g~~l~i~~~~~-------~~~~v~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~--~~i~W~~~--~ 150 (212)
.|.|.|.|...... ..+.|...... ..++.+...+....+.+|+.+.|.|.+.+.|. +.+.|+++ +
T Consensus 83 ~~~D~G~Y~C~~~n~~~~~~~~~~~l~V~~~~~~-~~~~~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~g 161 (240)
T 1moe_A 83 EADDVATYYCQQTNEDPYTFGGGTKLEIKGGGSG-GGGEVQLQQSGAELVEPGASVKLSCTASGFNIKDTYMHWVKQRPE 161 (240)
T ss_dssp CGGGCEEEEEEECSSSSCCBCCCEEEEECCCSCC-CCCCCEEEECCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTT
T ss_pred ChhhCEEEEEEEccCCceeecCCEEEEEecCCCC-CCceEEEeCCCceEEeCCCcEEEEEEEcCccCCCCEEEEEEECCC
Confidence 37888888876631 22333221000 01122333455667889999999999998874 59999995 2
Q ss_pred EEec---------------CCCCCceEEcCC--CCceeEEEcCCCCCCCeeEEEEEEc
Q psy2441 151 LPVD---------------TSRNPRYNLLTS--GAPGALQITNSIEEDQGKYECVAEN 191 (212)
Q Consensus 151 ~~~~---------------~~~~~~~~~~~~--~~~~~l~i~~~~~~d~g~y~C~a~n 191 (212)
.... .....++....+ ....+|.|.+++.+|+|.|.|.|.+
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~ 219 (240)
T 1moe_A 162 QGLEWIGRIDPANGNSKYVPKFQGKATITADTSSNTAYLQLTSLTSEDTAVYYCAPFG 219 (240)
T ss_dssp SCCEEEEEEETTTTEEEECGGGTTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEECS
T ss_pred CCcEEEEEEcccCCccccCccccccEEEEEcccCCEEEEEECcCCHHHCEEEEEEEEe
Confidence 2110 001234444322 2346899999999999999999984
No 198
>1iga_A IGA1; immunoglobulin; NMR {Homo sapiens} PDB: 2esg_A 2qtj_A 3chn_A 1r70_B 3cm9_A
Probab=99.70 E-value=9.5e-16 Score=118.62 Aligned_cols=191 Identities=11% Similarity=0.124 Sum_probs=112.3
Q ss_pred ceeeEEEeeccCCCcceecccccC------------------CCCCeEE-eCCCccEEeeCCeEEEEcccCCCCC---Cc
Q psy2441 3 IGTYIKIKPNLFSPLSVYSADKIP------------------PGFPQIT-EAPSTKVVEISHTTVLHCSASGNPP---PK 60 (212)
Q Consensus 3 ~g~Y~C~~~~~~~~~~~~~~~~~~------------------~~~p~~~-~~~~~~~v~~g~~v~l~C~~~~~p~---~~ 60 (212)
.|.|+|++.|..+........+.+ ..+|.+. ..|....+.+|+.+.|.|.+.+.++ +.
T Consensus 202 ~g~Y~C~a~n~~~~~~~~~v~l~V~~~~~~~~~~~~~~~~~~~~~p~v~~~~p~~~~~~~G~~v~L~C~~~g~~p~~~~~ 281 (475)
T 1iga_A 202 GKSVTCHVKHYTNPSQDVTVPCPVPSTPPTPSPSTPPTPSPSCCHPRLSLHRPALEDLLLGSEANLTCTLTGLRDASGVT 281 (475)
T ss_pred CceEEEEEEECCCCceeeeEecccccCcccccccccccCCCCCCCcEEEEcCCChHHhccCCceEEEEEEEcccCCCceE
Confidence 489999999987642111111111 1356553 4444445689999999999988644 58
Q ss_pred EEEEeCCEEecCCC--------CC------eeEEeec--CCCCeEEEeeeCCccc--eeEEeecCCCCCCCccccCCcc-
Q psy2441 61 ISWIREMLPVDTSR--------NP------RYNLLTS--GAPGTYIKIKPNLFSP--LSVYSADKIPPGFPQITEAPST- 121 (212)
Q Consensus 61 v~W~k~g~~l~~~~--------~~------~~~~~~~--~~~g~~l~i~~~~~~~--~~v~~~~~~~~~~p~~~~~~~~- 121 (212)
|+| +++ .+.... +. .+.+... +|.|.|.|........ ............+|.+...+..
T Consensus 282 i~W-~~~-~~~~~~~~~~~~~~~g~~~~~~~L~I~~~~~~d~G~Y~C~a~n~~~~~~~~~~v~~~~~~~~P~v~~~~~~~ 359 (475)
T 1iga_A 282 FTW-TPS-SGKSAVQGPPERDLCGCYSVSSVLPGCAEPWNHGKTFTCTAAYPESKTPLTATLSKSGNTFRPEVHLLPPPS 359 (475)
T ss_pred EEE-CCC-CcCCccccCceECCCCCEEEEEEEEEchHHhccCCcEEEEEEcCCCCCceEEEeecCCCCCCCeEEEECCCh
Confidence 999 443 332110 01 1222222 4789999988873332 1111111111233555443332
Q ss_pred eeEecCCcEEEEEeeeeCCC--CceEEEeCCEEecCCCC--CceEEc---CCCC---ceeEEEcCCCCCCCeeEEEEEEc
Q psy2441 122 KVVEISHTTVLHCSASGNPP--PKISWIREMLPVDTSRN--PRYNLL---TSGA---PGALQITNSIEEDQGKYECVAEN 191 (212)
Q Consensus 122 ~~~~~g~~~~l~C~~~~~p~--~~i~W~~~~~~~~~~~~--~~~~~~---~~~~---~~~l~i~~~~~~d~g~y~C~a~n 191 (212)
..+..|+.+.|.|.+.+.++ +.+.|+++|..+..... ...... .++. .+.|.|.....+|.|.|+|.|.|
T Consensus 360 ~~v~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~gt~~~~s~L~i~~~~~~~~g~YtC~a~n 439 (475)
T 1iga_A 360 EELALNELVTLTCLARGFSPKDVLVRWLQGSQELPREKYLTWASRQEPSQGTTTFAVTSILRVAAEDWKKGDTFSCMVGH 439 (475)
T ss_pred HHhccCCceEEEEEEeeeECCCCEEEEEECCEECCCCceeecccccccCCCCCcEEEEEEEEEChHHhcCCCEEEEEEEc
Confidence 34667999999999988633 59999999988765310 000111 1111 24677777777889999999999
Q ss_pred cccc
Q psy2441 192 EVGT 195 (212)
Q Consensus 192 ~~g~ 195 (212)
....
T Consensus 440 ~~l~ 443 (475)
T 1iga_A 440 EALP 443 (475)
T ss_pred CCCC
Confidence 7543
No 199
>4dzb_B Vbeta2 (MAIT T cell receptor); immune system; 1.70A {Homo sapiens} PDB: 1ymm_E* 3o4l_E* 3o6f_D 3t0e_D 1ktk_E 3mfg_B 2ij0_E
Probab=99.70 E-value=1.7e-16 Score=112.47 Aligned_cols=164 Identities=15% Similarity=0.237 Sum_probs=103.0
Q ss_pred eEEeCCCccEEeeCCeEEEEcccCCCCCCcEEEEe----------------CCEEecCC-CCCeeEEe------------
Q psy2441 31 QITEAPSTKVVEISHTTVLHCSASGNPPPKISWIR----------------EMLPVDTS-RNPRYNLL------------ 81 (212)
Q Consensus 31 ~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~k----------------~g~~l~~~-~~~~~~~~------------ 81 (212)
.+...|..+.+.+|+.+.|.|.+.+.+.+.|.||| ++..+... ...|+.+.
T Consensus 3 ~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~ 82 (246)
T 4dzb_B 3 VVSQHPSWVISKSGTSVKIECRSLDFQATTMFWYRQFPKQSLMLMATSNEGSKATYEQGVEKDKFLINHASLTLSTLTVT 82 (246)
T ss_dssp CEEEECSEEEEETTSCEEEEEEESSSCCCSEEEEEECTTSCCEEEEEECTTSCCEECTTCCGGGEEEEEEETTEEEEEEC
T ss_pred ccEECCcEEEEeCCCcEEEEeEecCCCceEEEEEEECCCCCcEEEEEEccCCCceecCcccCCcEEEEecCCCEEEEEEC
Confidence 45667778899999999999999888889999999 33222211 11333332
Q ss_pred ec--CCCCeEEEeeeCC----------ccceeEEeecCCCCCCCccc-cCCcceeEecCCcEEEEEeeeeCCCC--ceEE
Q psy2441 82 TS--GAPGTYIKIKPNL----------FSPLSVYSADKIPPGFPQIT-EAPSTKVVEISHTTVLHCSASGNPPP--KISW 146 (212)
Q Consensus 82 ~~--~~~g~~l~i~~~~----------~~~~~v~~~~~~~~~~p~~~-~~~~~~~~~~g~~~~l~C~~~~~p~~--~i~W 146 (212)
.. .|.|.|.|..... ...+.|..... ...+|.+. ..+....+.+|+.+.|.|.+.+.+++ .+.|
T Consensus 83 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~-~~~~P~i~~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W 161 (246)
T 4dzb_B 83 SAHPEDSSFYICSARTSGDFGEQFFGPGTRLTVLEDLK-NVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSW 161 (246)
T ss_dssp SCCGGGCEEEEEEECCSSGGGCCEECCCEEEEEESCGG-GCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEEEEE
T ss_pred CCCHHHCEEEEEEEecCCCCcceEEcCCEEEEEecCCC-cccCCceEeecCCchhccCCCcEEEEEEEccCcCCceEEEE
Confidence 11 3788888877531 22333432100 11124333 23333445569999999999886654 8999
Q ss_pred EeCCEEecCCCCCceEEc--------CCCC---ceeEEEcCCCCCC-CeeEEEEEEcccccce
Q psy2441 147 IREMLPVDTSRNPRYNLL--------TSGA---PGALQITNSIEED-QGKYECVAENEVGTEY 197 (212)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~--------~~~~---~~~l~i~~~~~~d-~g~y~C~a~n~~g~~~ 197 (212)
++++..+... ...... .++. ...|.|.....+| .|.|+|.|.|......
T Consensus 162 ~k~g~~l~~~--~~~~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~~g~YtC~v~~~~~~~~ 222 (246)
T 4dzb_B 162 WVNGKEVHSG--VCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGLSEN 222 (246)
T ss_dssp EETTEEECTT--EEECSSCEESSTTSTTCCEEEEEEEEEEHHHHTCTTCEEEEEEEECCBCTT
T ss_pred EECCEECCCC--cccccccccccccCCCCCEEEEEEEEECHHHhccCCCeEEEEEEecCCCCc
Confidence 9999888653 111000 1111 1347888887778 9999999999765443
No 200
>3u83_A Poliovirus receptor-related protein 1; nectin-1, hinge region plasiticity, cell adhesion; HET: PG6; 2.50A {Homo sapiens} PDB: 3alp_A* 3u82_B 4fmf_A* 3sku_E* 2l7j_A
Probab=99.70 E-value=1.8e-16 Score=116.94 Aligned_cols=169 Identities=18% Similarity=0.227 Sum_probs=102.4
Q ss_pred CCCeEEeCCCccEEeeCCeEEEEcccCCC----CCCcEEEEeCC--E-------------EecCCCCCeeEE--------
Q psy2441 28 GFPQITEAPSTKVVEISHTTVLHCSASGN----PPPKISWIREM--L-------------PVDTSRNPRYNL-------- 80 (212)
Q Consensus 28 ~~p~~~~~~~~~~v~~g~~v~l~C~~~~~----p~~~v~W~k~g--~-------------~l~~~~~~~~~~-------- 80 (212)
.++.+...+..+.+.+|+++.|.|.+.+. +.+.+.|+|++ . .+......|+.+
T Consensus 13 ~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~~~v~W~k~~~~~~~~i~~~~~~~~~~~~~~~~~r~~~~~~~~~~~ 92 (331)
T 3u83_A 13 DPSQVVQVNDSMYGFIGTDVVLHCSFANPLPSVKITQVTWQKSTNGSKQNVAIYNPSMGVSVLAPYRERVEFLRPSFTDG 92 (331)
T ss_dssp --------CEEEEEETTCCEEECCBCSSCCSSCEEEEEEEEEEETTEEEEEEEEETTTEEEECTTCTTTEEESSCSSSBC
T ss_pred CCcceEEcCCcEEEEecCCEEEeeecCCCCCCCceEEEEEEEcCCCCCceEEEEeccCCCCcCcccCCceEecccCCCCc
Confidence 34444566677899999999999999776 44579999954 1 111111233332
Q ss_pred ----eec--CCCCeEEEe-eeC------CccceeEEeecCCCCCCCccc--cCCcceeEecC---CcEEEEEe-eeeCCC
Q psy2441 81 ----LTS--GAPGTYIKI-KPN------LFSPLSVYSADKIPPGFPQIT--EAPSTKVVEIS---HTTVLHCS-ASGNPP 141 (212)
Q Consensus 81 ----~~~--~~~g~~l~i-~~~------~~~~~~v~~~~~~~~~~p~~~--~~~~~~~~~~g---~~~~l~C~-~~~~p~ 141 (212)
... .|.|.|.|. ... ....+.|.. +|.+. ..+....+.+| +.+.|.|. +.+.|.
T Consensus 93 ~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~-------~p~~~~~~~~~~~~~~~g~~~~~~~l~C~~~~~~p~ 165 (331)
T 3u83_A 93 TIRLSRLELEDEGVYICEFATFPTGNRESQLNLTVMA-------KPTNWIEGTQAVLRAKKGQDDKVLVATCTSANGKPP 165 (331)
T ss_dssp CEEECSCCGGGCEEEEEEEEEETTEEEEEEEEEEEEB-------CCEEEEEECSSCEEECTTCCCCEEEEEEEEEEEBSC
T ss_pred eEEEcccCcccCcEEEEEEEecCCCccEEEEEEEEec-------CCcceeecCCCceeecCCCccceEEEEEEecCCcCC
Confidence 222 378888886 332 222333332 14332 23444667778 77999998 889999
Q ss_pred CceEEEeCCEEecCCCCCceEEcCCCC---ceeEEEcCCCCCCCeeEEEEEEcccccceecceEEEEec
Q psy2441 142 PKISWIREMLPVDTSRNPRYNLLTSGA---PGALQITNSIEEDQGKYECVAENEVGTEYSPSTMLYVKG 207 (212)
Q Consensus 142 ~~i~W~~~~~~~~~~~~~~~~~~~~~~---~~~l~i~~~~~~d~g~y~C~a~n~~g~~~~~~~~l~v~~ 207 (212)
+.+.|++++...... ......++. ...|.|.++..+|.|.|+|.|.|..|..... +.|.|..
T Consensus 166 ~~i~W~~~~~~~~~~---~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~-~~l~V~~ 230 (331)
T 3u83_A 166 SVVSWETRLKGEAEY---QEIRNPNGTVTVISRYRLVPSREAHQQSLACIVNYHMDRFKES-LTLNVQY 230 (331)
T ss_dssp CEEEEEESSCCEEEE---EEEECTTSCEEEEEEEEECCCGGGTTCEEEEEEEETTEEEEEE-EECCEEE
T ss_pred ceEEEEcCCCCcccc---ceeECCCCcEEEEEEEEEEeccccCCCEEEEEEecCCCcceee-EEEEEec
Confidence 999999953221110 000111110 2578899999999999999999998876655 6666644
No 201
>2dm3_A KIAA0992 protein, palladin; beta-sandwich, myopalladin, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.70 E-value=4.9e-17 Score=101.03 Aligned_cols=98 Identities=26% Similarity=0.427 Sum_probs=79.9
Q ss_pred CCccccCCcceeEecCCcEEEEEeeeeCCCCceEEEeCCEEecCCCCCceEEcCCCCceeEEEcCCCCCCCeeEEEEEEc
Q psy2441 112 FPQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREMLPVDTSRNPRYNLLTSGAPGALQITNSIEEDQGKYECVAEN 191 (212)
Q Consensus 112 ~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~n 191 (212)
+|.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+.... .............|.|.++..+|+|.|.|.|.|
T Consensus 9 ~P~i~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~g~~~~~~~-~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n 87 (110)
T 2dm3_A 9 RPHFLQAPGDLTVQEGKLCRMDCKVSGLPTPDLSWQLDGKPVRPDS-AHKMLVRENGVHSLIIEPVTSRDAGIYTCIATN 87 (110)
T ss_dssp CCEEEECCCEEEEESSSCBCCEEEEECSSCCEEECBBSSSBCCCCS-SEEEEECTTSCEEEEESSCCGGGCSBBCEEEEC
T ss_pred CCcEEeCCCcEEEeCCCEEEEEEEEEEcCCCEEEEEECCEECCCCC-ceEEEEecCCeEEEEEeeCCcccCEEEEEEEEC
Confidence 4778878888889999999999999999999999999998776542 222223333346899999999999999999999
Q ss_pred ccccceecceEEEEecceec
Q psy2441 192 EVGTEYSPSTMLYVKGTQVD 211 (212)
Q Consensus 192 ~~g~~~~~~~~l~v~~~~~p 211 (212)
..|..... +.|.|.+++.|
T Consensus 88 ~~g~~~~~-~~l~V~~~p~~ 106 (110)
T 2dm3_A 88 RAGQNSFS-LELVVAAKESG 106 (110)
T ss_dssp SSCEEEEC-CEEEEECCCCS
T ss_pred CCCEEEEE-EEEEEeCCCCC
Confidence 99998777 89998877543
No 202
>2bk8_A Connectin, M1, titin heart isoform N2-B; IG domain, M-BAND, structural protein, muscle, antibo; 1.69A {Homo sapiens}
Probab=99.70 E-value=3.2e-16 Score=95.11 Aligned_cols=91 Identities=20% Similarity=0.367 Sum_probs=74.9
Q ss_pred ccCCcceeEecCCcEEEEEeeeeC-CCCceEEEeCCEEecCCCCCceEEcCCCCceeEEEcCCCCCCCeeEEEEEEcccc
Q psy2441 116 TEAPSTKVVEISHTTVLHCSASGN-PPPKISWIREMLPVDTSRNPRYNLLTSGAPGALQITNSIEEDQGKYECVAENEVG 194 (212)
Q Consensus 116 ~~~~~~~~~~~g~~~~l~C~~~~~-p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~n~~g 194 (212)
...+....+.+|+.+.|.|.+.+. |.|.+.|++++..+... .++.....+....|.|.++..+|+|.|.|.|.|..|
T Consensus 5 ~~~~~~~~v~~G~~v~l~C~~~g~~p~~~v~W~~~~~~~~~~--~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g 82 (97)
T 2bk8_A 5 SGQIMHAVGEEGGHVKYVCKIENYDQSTQVTWYFGVRQLENS--EKYEITYEDGVAILYVKDITKLDDGTYRCKVVNDYG 82 (97)
T ss_dssp ECCCCCEEECTTCCEEEEEEEESCCTTCEEEEEETTEECCSS--SSEEEEEETTEEEEEECSCCGGGCEEEEEEEECSSC
T ss_pred eccCcCEEEcCCCcEEEEEEEeccCCCCEEEEEECCEECcCC--CCEEEEEcCCeEEEEEecCChhhCeEEEEEEECCCC
Confidence 445666788999999999999997 88999999999988764 455443344346999999999999999999999999
Q ss_pred cceecceEEEEecce
Q psy2441 195 TEYSPSTMLYVKGTQ 209 (212)
Q Consensus 195 ~~~~~~~~l~v~~~~ 209 (212)
..... +.|.|++.+
T Consensus 83 ~~~~~-~~l~V~~~~ 96 (97)
T 2bk8_A 83 EDSSY-AELFVKGVR 96 (97)
T ss_dssp EEEEE-EEEEETTTC
T ss_pred eEeEE-EEEEEEecC
Confidence 98877 888887643
No 203
>1zvo_C Myeloma immunoglobulin D delta; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=99.70 E-value=3.8e-15 Score=116.27 Aligned_cols=165 Identities=16% Similarity=0.194 Sum_probs=97.4
Q ss_pred CCeEE-eCCCccEEeeCCeEEEEcccCCCCC--CcEEEEeCCEEecCC---------CCCee------EEeec--CCCCe
Q psy2441 29 FPQIT-EAPSTKVVEISHTTVLHCSASGNPP--PKISWIREMLPVDTS---------RNPRY------NLLTS--GAPGT 88 (212)
Q Consensus 29 ~p~~~-~~~~~~~v~~g~~v~l~C~~~~~p~--~~v~W~k~g~~l~~~---------~~~~~------~~~~~--~~~g~ 88 (212)
+|.+. ..|....+.+|+.+.|.|.+.+..+ ..|+|+|+|..+... .+..+ .+... ++.|.
T Consensus 296 ~p~v~~~~p~~~~~~~g~~~~L~C~v~g~~P~~~~i~W~k~g~~~~~~~~~~~~~~~~~gt~~~~s~L~i~~~~~~d~g~ 375 (512)
T 1zvo_C 296 PLGVYLLTPAVQDLWLRDKATFTCFVVGSDLKDAHLTWEVAGKVPTGGVEEGLLERHSNGSQSQHSRLTLPRSLWNAGTS 375 (512)
T ss_pred CCEEEEECCChHHhccCCceEEEEEEeceECCCeEEEEEECCEeccCceeccceecCCCCeEEEEEEEEEchHHhcCCCe
Confidence 45554 3444455678999999999988533 389999999876521 01222 22211 36788
Q ss_pred EEEeeeCCcc---ceeEEeecCCC-CCCCccccCCcceeEecCCcEE-EEEeeeeCCCC--ceEEEeCCEEecCCCCC--
Q psy2441 89 YIKIKPNLFS---PLSVYSADKIP-PGFPQITEAPSTKVVEISHTTV-LHCSASGNPPP--KISWIREMLPVDTSRNP-- 159 (212)
Q Consensus 89 ~l~i~~~~~~---~~~v~~~~~~~-~~~p~~~~~~~~~~~~~g~~~~-l~C~~~~~p~~--~i~W~~~~~~~~~~~~~-- 159 (212)
|.|....... ...+....... ..+|.+...+... .|+.+. |.|.+.+.+++ .+.|+++|..+......
T Consensus 376 y~C~a~n~~~~~~~~~~~~~~~~~~~~~p~v~~~~~~~---~~~~~~~L~C~~~g~~P~~i~v~W~k~g~~~~~~~~~~~ 452 (512)
T 1zvo_C 376 VTCTLNHPSLPPQRLMALREPAAQAPVKLSLNLLASSD---PPEAASWLLCEVSGFSPPNILLMWLEDQREVNTSGFAPA 452 (512)
T ss_pred EEEEEEeCCCCCCceeEEeecCCCCCCCCEEEEEccCc---CCCCceEEEEEEeeeCCCCcEEEEEECCeECcCcccccc
Confidence 8888776322 12222111000 1124443332222 688899 99999985443 68899999988653111
Q ss_pred ceEEcCCCC----ceeEEEcCCCCCCCeeEEEEEEcccccc
Q psy2441 160 RYNLLTSGA----PGALQITNSIEEDQGKYECVAENEVGTE 196 (212)
Q Consensus 160 ~~~~~~~~~----~~~l~i~~~~~~d~g~y~C~a~n~~g~~ 196 (212)
......++. .+.|.+.....+|.|.|+|.|.|.....
T Consensus 453 ~~~~~~dg~~~~~~s~L~v~~~~~~~~g~YtC~v~h~~l~~ 493 (512)
T 1zvo_C 453 RPPPQPGSTTFWAWSVLRVPAPPSPQPATYTCVVSHEDSRT 493 (512)
T ss_pred ceeECCCCCEEEEEEEEEECchhcCCCCeEEEEEEecCCCC
Confidence 111122211 1356777777778999999999976543
No 204
>1q9r_B S25-2 FAB (IGG1K) heavy chain; antigen-binding fragment, anti-carbohydrate, anti-LPS, antibody, immunoglobulin, KDO, complex, immune system; HET: KDA KDO; 1.45A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q9l_B 1q9k_B* 1q9q_B* 1q9v_B* 2r1w_B* 2r1x_B* 2r1y_B* 2r2b_B* 2r2e_B* 2r2h_B* 3bpc_B* 3sy0_B* 3t4y_B* 3t65_B* 2r23_B* 1q9t_B* 3t77_B* 3okl_B* 3okk_B* 3okm_B ...
Probab=99.70 E-value=1.2e-16 Score=111.52 Aligned_cols=158 Identities=16% Similarity=0.283 Sum_probs=97.4
Q ss_pred CCccEEeeCCeEEEEcccCCCC--CCcEEEEeCC--EE---e--------------cCCCCCeeEEeec-----------
Q psy2441 36 PSTKVVEISHTTVLHCSASGNP--PPKISWIREM--LP---V--------------DTSRNPRYNLLTS----------- 83 (212)
Q Consensus 36 ~~~~~v~~g~~v~l~C~~~~~p--~~~v~W~k~g--~~---l--------------~~~~~~~~~~~~~----------- 83 (212)
+....+.+|+++.|.|.+.+.+ .+.+.|||++ .. + ......|+.+...
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~ 86 (222)
T 1q9r_B 7 SGGGLVQSGGSLRLSCATSGFTFTDYYMSWVRQPPGKALEWLGFIRNKANGYTTEYSPSVKGRFTISRDNSQSILYLQMN 86 (222)
T ss_dssp ECCCEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEECCGGGTTCEEECTTTBTTEEEEEETTTTEEEEEEC
T ss_pred CCceeEcCCCEEEEEEEecCccCCCCcEEEEEECCCCCcEEEEEEccCCcccccccCcccCCceEEEEECCCCeEEEEEC
Confidence 4467889999999999998765 6789999852 11 1 0001234444321
Q ss_pred ----CCCCeEEEeeeCCc-----------cceeEEeecCCCCCCCccccCCcceeEecCCcEEEEEeeeeC-CCC-ceEE
Q psy2441 84 ----GAPGTYIKIKPNLF-----------SPLSVYSADKIPPGFPQITEAPSTKVVEISHTTVLHCSASGN-PPP-KISW 146 (212)
Q Consensus 84 ----~~~g~~l~i~~~~~-----------~~~~v~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~-p~~-~i~W 146 (212)
.|.|.|.|...... ..+.|.. .+..+|.+...+....+.+|+.+.|.|.+.+. |.| .+.|
T Consensus 87 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~---~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W 163 (222)
T 1q9r_B 87 TLRAEDSATYYCARDHDGYYERFSYWGQGTLVTVSA---AKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTW 163 (222)
T ss_dssp SCCGGGCEEEEEEECCCSSCCSCCCBCCCEEEEECS---SCCBCCEEEEECCCSCCCCSSEEEEEEEEEEEBSSCCEEEE
T ss_pred cCCcccCeEEEEEEeccCCcccceEeCCceEEEecc---CCCCCCeEEEccccccccCCCcEEEEEEEccEECCCCEEEE
Confidence 36777777765522 1222221 11223444433222234579999999999985 888 9999
Q ss_pred EeCCEEecCCCCCceEEcCCCC---ceeEEEcCCCCCCCeeEEEEEEcccccceec
Q psy2441 147 IREMLPVDTSRNPRYNLLTSGA---PGALQITNSIEEDQGKYECVAENEVGTEYSP 199 (212)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~---~~~l~i~~~~~~d~g~y~C~a~n~~g~~~~~ 199 (212)
++++..+....... ...++. .+.|.|.++..+| |.|+|.|.|..|.....
T Consensus 164 ~~~g~~~~~~~~~~--~~~~~~~~~~s~L~i~~~~~~d-g~y~C~a~n~~~~~~~~ 216 (222)
T 1q9r_B 164 NSGSLSSGVHTFPA--VLQSDLYTLSSSVTVPSSTWPS-ETVTCNVAHPASSTKVD 216 (222)
T ss_dssp GGGTBCTTEEEEEE--EEETTEEEEEEEEEEETTTTTT-SCCEEEEEEGGGTEEEE
T ss_pred ecCCeEcceEeccc--cccCCcEEEEEEEEECchhcCC-CeEEEEEEccCCCCcEE
Confidence 99886543210000 001110 2578999999899 99999999998876433
No 205
>1l6x_A Immunoglobulin gamma-1 heavy chain constant regio; IGG1 FC, FC complex, immune system; HET: NAG BMA MAN GAL FUL; 1.65A {Homo sapiens} SCOP: b.1.1.2 b.1.1.2 PDB: 2iwg_A* 3v7m_A* 3d6g_A* 3agv_A* 1oqo_A* 1oqx_A* 3v95_A* 2wah_A* 3sgj_A* 3sgk_A* 2dtq_A* 2dts_A* 3ave_A* 3ay4_A* 3do3_A* 2gj7_A* 1t83_A* 1t89_A* 1dn2_A* 3dnk_A ...
Probab=99.70 E-value=7.4e-17 Score=111.49 Aligned_cols=166 Identities=19% Similarity=0.270 Sum_probs=96.1
Q ss_pred CeEEeCCCccEE--eeCCeEEEEcccCCCC----CCcEEEEeCCEEecCCC--------CCeeEEee------c--CCCC
Q psy2441 30 PQITEAPSTKVV--EISHTTVLHCSASGNP----PPKISWIREMLPVDTSR--------NPRYNLLT------S--GAPG 87 (212)
Q Consensus 30 p~~~~~~~~~~v--~~g~~v~l~C~~~~~p----~~~v~W~k~g~~l~~~~--------~~~~~~~~------~--~~~g 87 (212)
|.+...+....+ .+|+++.|.|.+.+.+ ...|.|||++.++.... ...+.+.. . +|.|
T Consensus 2 P~v~~~pps~~~~~~~G~~v~L~C~~~g~~p~~~~~~v~W~k~~~~~~~~~~~~~~~~~~g~~~~~~~l~i~~~d~~d~g 81 (207)
T 1l6x_A 2 PSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGK 81 (207)
T ss_dssp CEEEEECCCHHHHHCTTSCCEEEEEEEEECSSSCCCEEEEEETTEEECCCEECCCEECTTSCEEEEEEEECCHHHHHTTC
T ss_pred CeEEEeCcChHHheecCCceEEEEEEecccCCCCCeEEEEEECCccccCcccCCceeccCCcEEEEEEEEEEHHHccCCc
Confidence 445444433433 7899999999998764 24899999998765321 12333321 1 2489
Q ss_pred eEEEeeeCCccc--eeEEeec-CCCCCCCccccCCcceeEecCCcEEEEEeeeeC-CC-CceEEEeCCEEecCCCCCceE
Q psy2441 88 TYIKIKPNLFSP--LSVYSAD-KIPPGFPQITEAPSTKVVEISHTTVLHCSASGN-PP-PKISWIREMLPVDTSRNPRYN 162 (212)
Q Consensus 88 ~~l~i~~~~~~~--~~v~~~~-~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~-p~-~~i~W~~~~~~~~~~~~~~~~ 162 (212)
.|.|........ ....... .....+|.+...+.......|+.+.|.|.+.|. |. +.+.|++++..+......++.
T Consensus 82 ~Y~C~a~n~~~~~~~~~~v~~~~~~~~~P~v~~~~~~~~~~~~~~~~L~C~~~g~~P~~~~v~W~k~g~~~~~~~~~~~~ 161 (207)
T 1l6x_A 82 EYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLPPSRDELTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPV 161 (207)
T ss_dssp CEEEEEECTTSSSCEEEEECCCCSCCBCCEEEEECCCGGGGGSSEEEEEEEEEEEBSSCCEEEEEETTEEECCEEECCCE
T ss_pred eEEEEEEcCcCCcceEEEeccCCCCCcCCEEEEECCChHHhcCCcEEEEEEEeCeECCCeEEEEEECCeeccCccccCce
Confidence 999988874332 1111110 011223554433222112246679999999984 54 499999999887642111121
Q ss_pred EcCCCC---ceeEEEcCCCCCCCeeEEEEEEccccc
Q psy2441 163 LLTSGA---PGALQITNSIEEDQGKYECVAENEVGT 195 (212)
Q Consensus 163 ~~~~~~---~~~l~i~~~~~~d~g~y~C~a~n~~g~ 195 (212)
...++. .+.|.+.....+|.|.|+|.|.|....
T Consensus 162 ~~~~gt~~~~s~l~i~~~~~~~~g~YtC~a~n~~l~ 197 (207)
T 1l6x_A 162 LDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALH 197 (207)
T ss_dssp ECTTSCEEEEEEEEEEHHHHHTTCCEEEEEECTTSG
T ss_pred ECCCCCEEEEEEEEECHHHcCCCCEEEEEEEcCCcC
Confidence 122221 133455555556799999999997543
No 206
>2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens}
Probab=99.69 E-value=5.5e-17 Score=118.35 Aligned_cols=175 Identities=16% Similarity=0.142 Sum_probs=106.8
Q ss_pred ceeeEEEeeccCCCcceecccccCCCCCeEEe-----CCCccEEeeCCeEEEEcccCCCCCCcEEEEeCCEEecCCCCCe
Q psy2441 3 IGTYIKIKPNLFSPLSVYSADKIPPGFPQITE-----APSTKVVEISHTTVLHCSASGNPPPKISWIREMLPVDTSRNPR 77 (212)
Q Consensus 3 ~g~Y~C~~~~~~~~~~~~~~~~~~~~~p~~~~-----~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~k~g~~l~~~~~~~ 77 (212)
+|.|+|.+.|..+... ....+.+..+|.+.. .+....+.+|+.+.|.|.+.+.|.+.+.|++++..+... .+
T Consensus 74 ~G~Y~C~a~n~~g~~~-~~~~l~V~~~p~~~~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~~--~~ 150 (305)
T 2nzi_A 74 ATVYQVRATNQGGSVS-GTASLEVEVPAKIHLPKTLEGMGAVHALRGEVVSIKIPFSGKPDPVITWQKGQDLIDNN--GH 150 (305)
T ss_dssp CSEEEEEEEETTEEEE-EEEEEEECEEEEECCCHHHHSSCCEEEETTCCEEEEEEEEEESCCEEEEEESSSBCCSS--SS
T ss_pred CeEEEEEEEcCCCCcc-ceEEEEEecCCccCCCccccccccEEecCCCEEEEEEEECCCCCCEEEEEECCEECCCC--Cc
Confidence 5899999999877643 334444455554432 235677889999999999999999999999999887654 22
Q ss_pred eE-----------Eee-c--CCCCeEEEeeeCCcc--ceeEEeecCCCCCCCccccCCcceeEecCCcEEEEE-------
Q psy2441 78 YN-----------LLT-S--GAPGTYIKIKPNLFS--PLSVYSADKIPPGFPQITEAPSTKVVEISHTTVLHC------- 134 (212)
Q Consensus 78 ~~-----------~~~-~--~~~g~~l~i~~~~~~--~~~v~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C------- 134 (212)
+. +.. . .|.|.|.|...+... ...+.......+.+|.... .....+..+.|.|
T Consensus 151 ~~~~~~~~~~~l~i~~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v~~~P~~p~~~~----~~~~~~~~v~l~w~~p~~~g 226 (305)
T 2nzi_A 151 YQVIVTRSFTSLVFPNGVERKDAGFYVVCAKNRFGIDQKTVELDVADVPDPPRGVK----VSDVSRDSVNLTWTEPASDG 226 (305)
T ss_dssp CEEEECSSEEEEEETTCCCSTTCEEEEEEEEETTEEEEEEEEEEEEBCCCCCEEEE----EESCCSSCEEEEEECCSCCS
T ss_pred EEEEEcCCceEEEEecCCccCccEEEEEEEEeCCCceeeEEEEEEecCCCCCCCce----eeeccCCEEEEEEcCCccCC
Confidence 22 222 1 478888887766221 1111111111222232110 0111234444444
Q ss_pred -------eeeeCCCCceEEEeCCEEecCCCCCceEEcCCCCceeEEEcCCCCCCCeeEEEEEEcccccceec
Q psy2441 135 -------SASGNPPPKISWIREMLPVDTSRNPRYNLLTSGAPGALQITNSIEEDQGKYECVAENEVGTEYSP 199 (212)
Q Consensus 135 -------~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~n~~g~~~~~ 199 (212)
.+...+.+...|.+.+... . ..+.|.++...+.|.|.|.|.|..|.....
T Consensus 227 ~~~i~~y~v~~~~~~~~~w~~~~~~~------------~---~~~~i~~l~~~~~y~~~~~A~N~~G~~~~S 283 (305)
T 2nzi_A 227 GSKITNYIVEKCATTAERWLRVGQAR------------E---TRYTVINLFGKTSYQFRVIAENKFGLSKPS 283 (305)
T ss_dssp BSCEEEEEEEEEETTSCCEEEEEEES------------S---SEEEECSCCSSCEEEEEEEEEETTEECCCC
T ss_pred CCceeEEEEEEecCCCCccEECcccc------------C---ceEEecCCCCCCeEEEEEEEEeCCcccCCc
Confidence 4444444444454432211 1 689999999999999999999999876543
No 207
>1svz_A Immunoglobulin;, single-chain FV fragment 1696; antibody-antigen complex, HIV inhibiting antibody; 1.89A {Mus musculus} PDB: 1jp5_A
Probab=99.69 E-value=2e-15 Score=107.00 Aligned_cols=162 Identities=17% Similarity=0.284 Sum_probs=99.4
Q ss_pred eEEeCCCccEEeeCCeEEEEcccCCCC-----CCcEEEEeCC--EE---ec-------CCCCCeeEEe-----------e
Q psy2441 31 QITEAPSTKVVEISHTTVLHCSASGNP-----PPKISWIREM--LP---VD-------TSRNPRYNLL-----------T 82 (212)
Q Consensus 31 ~~~~~~~~~~v~~g~~v~l~C~~~~~p-----~~~v~W~k~g--~~---l~-------~~~~~~~~~~-----------~ 82 (212)
.+...|..+.+.+|++++|.|.+.+.| .+.+.|||+. .. +. .....|+.+. .
T Consensus 3 ~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~ 82 (247)
T 1svz_A 3 LMTQTPLYLPVSLGDQASISCRSSQTIVHNNGNTYLEWYLQKPGQSPQLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISR 82 (247)
T ss_dssp CEEEECSEEEECTTCCEEEEEEESSCCBCTTSCBCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESS
T ss_pred cEEecCCeEEecCCCCEEEEEeCCCcccccCCCceEEEEEECCCCCceEEEEEecccCCCCCCcEEeccCCCEEEEEECC
Confidence 455667788999999999999998887 6889999942 11 11 0012344332 1
Q ss_pred c--CCCCeEEEeeeCCc-------cceeEEeecCC------CCCCCccccCCcceeEecCCcEEEEEeeeeCC--CCceE
Q psy2441 83 S--GAPGTYIKIKPNLF-------SPLSVYSADKI------PPGFPQITEAPSTKVVEISHTTVLHCSASGNP--PPKIS 145 (212)
Q Consensus 83 ~--~~~g~~l~i~~~~~-------~~~~v~~~~~~------~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p--~~~i~ 145 (212)
. +|.|.|.|...... ..+.|...... ...++.....+....+.+|+.+.|.|.+.+.+ .+.+.
T Consensus 83 v~~~D~G~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~ 162 (247)
T 1svz_A 83 VEAEDLGIYYCFQGSHFPPTFGGGTKLEIKGGGGSGGGGSGGGGSEVQLQQSGPELKKPGETVKISCKATNYAFTDYSMH 162 (247)
T ss_dssp CCGGGCEEEEEEECSSSSCEECCCEEEEEC---------------CCEEEECCCEEECTTCCEEEEEEEESSCGGGSCEE
T ss_pred CCHHHCEEEEEEEccCCccEECCCEEEEEECCccccccccccccCceEEeCCCceeecCCCcEEEEEEEcCcccCCcEEE
Confidence 1 37888888776521 22333221000 00012222233334588999999999998875 56999
Q ss_pred EEeCC--EEec------C---------CCCCceEEcC--CCCceeEEEcCCCCCCCeeEEEEEEcc
Q psy2441 146 WIREM--LPVD------T---------SRNPRYNLLT--SGAPGALQITNSIEEDQGKYECVAENE 192 (212)
Q Consensus 146 W~~~~--~~~~------~---------~~~~~~~~~~--~~~~~~l~i~~~~~~d~g~y~C~a~n~ 192 (212)
|++++ .... . ....++.... .....+|.|.++..+|+|.|.|.|.|.
T Consensus 163 W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~ 228 (247)
T 1svz_A 163 WVKQAPGGDLKYVGWINTETDEPTFADDFKGRFAFSLDTSTSTAFLQINNLKNEDTATYFCVRDRH 228 (247)
T ss_dssp EEEECTTCCEEEEEEECTTTCCEEECGGGSSSEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEEEG
T ss_pred EEEeCCCCCcEEEEEEEcCCCccccCccccCcEEEEEecCCCEEEEEECCCChhHCEEEEEEEecc
Confidence 99853 1110 0 0023444432 222468999999999999999999985
No 208
>3kvq_A Vascular endothelial growth factor receptor 2; vegfr2, angiogenesis, ATP-binding, developmental protein, differentiation, glycoprotein; 2.70A {Homo sapiens} SCOP: b.1.1.0
Probab=99.69 E-value=1.8e-16 Score=98.08 Aligned_cols=94 Identities=28% Similarity=0.499 Sum_probs=69.4
Q ss_pred CCccccCCcceeEecCCcEEEEEeeeeCCCCceEEEeCCEEecCCCCCceEEcCCCCceeEEEcCCCCCCCeeEEEEEEc
Q psy2441 112 FPQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREMLPVDTSRNPRYNLLTSGAPGALQITNSIEEDQGKYECVAEN 191 (212)
Q Consensus 112 ~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~n 191 (212)
+|.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+... .++....+. ..|.|.++..+|+|.|.|.|.|
T Consensus 10 ~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~i~W~~~~~~~~~~--~~~~~~~~~--~~L~i~~v~~~D~G~Y~C~a~n 85 (108)
T 3kvq_A 10 APTITGNLENQTTSIGESIEVSCTASGNPPPQIMWFKDNETLVED--SGIVLKDGN--RNLTIRRVRKEDEGLYTCQACS 85 (108)
T ss_dssp -CCCBSCCCCEEEETTCCEEEECBCC----CCEEEEESSSBCCCB--TTEEEETTT--TEEEECSCCGGGCEEEEEEEC-
T ss_pred CCceecCCCCeEEeCCCeEEEEEECcCcCCCeEEEEECCeEcccC--CCeEEeCCC--cEEEEeecCcccCEEEEEEEEe
Confidence 377777778888999999999999999999999999999877654 334343333 7899999999999999999999
Q ss_pred ccccceecceEEEEeccee
Q psy2441 192 EVGTEYSPSTMLYVKGTQV 210 (212)
Q Consensus 192 ~~g~~~~~~~~l~v~~~~~ 210 (212)
..|..... +.|.|.+.+.
T Consensus 86 ~~g~~~~~-~~l~V~~~~~ 103 (108)
T 3kvq_A 86 VLGCAKVE-AFFIIEGAQE 103 (108)
T ss_dssp ---CEEEE-EEEEEEC---
T ss_pred CCCceEEE-EEEEEeCCCc
Confidence 99998888 8888887654
No 209
>4acp_A IG gamma-1 chain C region; immune system, antibody, kifunensine; HET: NAG; 2.49A {Homo sapiens} PDB: 2j6e_A*
Probab=99.69 E-value=8.9e-17 Score=113.40 Aligned_cols=186 Identities=20% Similarity=0.294 Sum_probs=96.1
Q ss_pred eeeEEEeeccCCCcceecccccCCCCCeEE-eCCCccE-EeeCCeEEEEcccCCCC----CCcEEEEeCCEEecCCC---
Q psy2441 4 GTYIKIKPNLFSPLSVYSADKIPPGFPQIT-EAPSTKV-VEISHTTVLHCSASGNP----PPKISWIREMLPVDTSR--- 74 (212)
Q Consensus 4 g~Y~C~~~~~~~~~~~~~~~~~~~~~p~~~-~~~~~~~-v~~g~~v~l~C~~~~~p----~~~v~W~k~g~~l~~~~--- 74 (212)
|.|.|...+..+. -....+ ..+|.+. ..|.... +..|+.+.|.|.+.+.+ ...|+|+|+|.++....
T Consensus 1 ~~~~~~~~~~~~~---c~~~~~-~~~P~v~i~~ps~~~~l~~g~~~~L~C~v~g~~p~P~~i~v~W~k~g~~l~~~~~~~ 76 (240)
T 4acp_A 1 GTKSCDKTHTCPP---CPAPEL-LGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKP 76 (240)
T ss_dssp --------------------------CEEEEECCCHHHHHSSSSCCEEEEEEESCCC--CCCEEEEEETTEEECCCEECC
T ss_pred CceeeeeeecCCC---CCcccc-CCCCEEEEECcChHHhcccCCCcEEEEEEeccccCCCccEEEEEECCcccCCceecc
Confidence 6788887776553 111111 2345554 5555555 56799999999998853 23799999998874321
Q ss_pred -----CCeeEEee------c--CCCCeEEEeeeCCcc--ceeEEeec-CCCCCCCccccCCcceeEecCCcEEEEEeeee
Q psy2441 75 -----NPRYNLLT------S--GAPGTYIKIKPNLFS--PLSVYSAD-KIPPGFPQITEAPSTKVVEISHTTVLHCSASG 138 (212)
Q Consensus 75 -----~~~~~~~~------~--~~~g~~l~i~~~~~~--~~~v~~~~-~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~ 138 (212)
+..+.+.. . ++++.|.|....... .+...... .....+|.+...+.......|+.+.|.|.+.+
T Consensus 77 ~~~~~~g~~~~~s~L~i~~~~~~d~~~YtC~v~h~~~~~~~~~~i~~~~~~~~~P~V~v~~~~~~~~~g~~~~L~C~~~g 156 (240)
T 4acp_A 77 REEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLPPSRDELTKNQVSLTCLVKG 156 (240)
T ss_dssp CEEC---CEEEEEEEECCHHHHHHTCCEEEEEECC----CEEEEECCCCSCCBCCEEEEECCCGGGGGSSEEEEEEEEEE
T ss_pred ceECCCCeEEEEEEEEEechhccCCCEEEEEEEcCCCCccccccccccCCCCCCCEEEEECCChHHhcCCceEEEEEEeE
Confidence 12222111 1 246788888776332 12221110 11223355554433322234889999999998
Q ss_pred -CCCC-ceEEEeCCEEecCCCCCceEEcCCCC---ceeEEEcCCCCCCCeeEEEEEEccc
Q psy2441 139 -NPPP-KISWIREMLPVDTSRNPRYNLLTSGA---PGALQITNSIEEDQGKYECVAENEV 193 (212)
Q Consensus 139 -~p~~-~i~W~~~~~~~~~~~~~~~~~~~~~~---~~~l~i~~~~~~d~g~y~C~a~n~~ 193 (212)
+|.+ .+.|++++..+............++. .+.|.+......+.+.|+|.+.+..
T Consensus 157 f~P~~i~v~W~k~g~~~~~~~~~~~~~~~dgt~~~~s~L~v~~~~~~~~~~ytC~V~h~~ 216 (240)
T 4acp_A 157 FYPSDIAVEWESNGQPENNYKATPPVLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEA 216 (240)
T ss_dssp EBSSCCEEEEEETTEECSSEEECCCEECTTSCEEEEEEEEEEHHHHHTTCCEEEEEECTT
T ss_pred EeCCCcEEEEEECCEECCCcCccCceECCCCCEEEEEEEEEChHHhCCCCEEEEEEEECC
Confidence 5554 89999999886532111111111211 2456666555567899999999864
No 210
>1nct_A Titin; cell adhesion, glycoprotein, transmembrane, repeat, brain, immunoglobulin fold, alternative splicing, signal, muscle protein; NMR {Homo sapiens} SCOP: b.1.1.4 PDB: 1ncu_A 1tnm_A 1tnn_A
Probab=99.69 E-value=5.9e-17 Score=100.00 Aligned_cols=92 Identities=24% Similarity=0.455 Sum_probs=77.3
Q ss_pred CCccccCCcceeEecCCcEEEEEeeeeCCCCceEEEeCCEEecCCCCCceEEcCCCCceeEEEcCCCCCCCeeEEEEEEc
Q psy2441 112 FPQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREMLPVDTSRNPRYNLLTSGAPGALQITNSIEEDQGKYECVAEN 191 (212)
Q Consensus 112 ~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~n 191 (212)
+|.+...+....+.+|+.+.|.|.+.+.|.|.+.|++++..+... .++..........|.|.++..+|+|.|.|.|.|
T Consensus 14 ~~~i~~~p~~~~v~~G~~v~L~C~~~g~p~p~v~W~k~g~~l~~~--~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N 91 (106)
T 1nct_A 14 AARILTKPRSMTVYEGESARFSCDTDGEPVPTVTWLRKGQVLSTS--ARHQVTTTKYKSTFEISSVQASDEGNYSVVVEN 91 (106)
T ss_dssp CCEEEECCCCEEESSSSCEECCEEEECSSCCBCCBCSSSSCCTTC--SSEEEEECSSEEEEEECCCCSSCCSEEEECCBC
T ss_pred CCEEEECCCCEEEeCCCcEEEEEEEEEcCCCEEEEEECCEECCCC--CCEEEEECCCEEEEEECcCCchhCEEEEEEEEe
Confidence 367777888888999999999999999999999999999877654 555555444457999999999999999999999
Q ss_pred ccccceecceEEEEe
Q psy2441 192 EVGTEYSPSTMLYVK 206 (212)
Q Consensus 192 ~~g~~~~~~~~l~v~ 206 (212)
..|..... +.|.|+
T Consensus 92 ~~G~~~~~-~~l~V~ 105 (106)
T 1nct_A 92 SEGKQEAE-FTLTIQ 105 (106)
T ss_dssp SSCBCCEE-EEEEEC
T ss_pred CCCeEEEE-EEEEEE
Confidence 99997766 777765
No 211
>2e7c_A Myosin-binding protein C, fast-type; IG-like domain, fast MYBP-C, C-protein, skeletal muscle fast-isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.69 E-value=4.8e-16 Score=97.78 Aligned_cols=87 Identities=21% Similarity=0.327 Sum_probs=70.9
Q ss_pred CcceeEecCCcEEEEEeeeeCCCCceEEEeCCEEecCCCCCceEEcCCCCceeEEEcCCCCCCCeeEEEEEEccccccee
Q psy2441 119 PSTKVVEISHTTVLHCSASGNPPPKISWIREMLPVDTSRNPRYNLLTSGAPGALQITNSIEEDQGKYECVAENEVGTEYS 198 (212)
Q Consensus 119 ~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~n~~g~~~~ 198 (212)
+....+.+|+.+.|.|.+.+.|.|.+.|++++..+.. .++..........|.|.++..+|+|.|.|.|.|..|....
T Consensus 31 ~~~~~v~~G~~~~l~C~~~g~P~p~i~W~k~g~~l~~---~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~N~~G~~~~ 107 (118)
T 2e7c_A 31 RQTYIRKVGEQLNLVVPFQGKPRPQVVWTKGGAPLDT---SRVHVRTSDFDTVFFVRQAARSDSGEYELSVQIENMKDTA 107 (118)
T ss_dssp SSCEEEESSSCEEEEEEEEEESCCEEEEEETTEECCC---SSCEEEECSSEEEEEESSCCTTTCEEEEEEEECSSCEECC
T ss_pred CCCEEEECCCEEEEEEEEccCCCCEEEEEECCEECCC---CcEEEEECCCeEEEEECCCChhcCEEEEEEEEeCCCeEEE
Confidence 3557788999999999999999999999999998863 3333333333467999999999999999999999998776
Q ss_pred cceEEEEecce
Q psy2441 199 PSTMLYVKGTQ 209 (212)
Q Consensus 199 ~~~~l~v~~~~ 209 (212)
. +.|.|.+.+
T Consensus 108 ~-~~l~V~~~P 117 (118)
T 2e7c_A 108 T-IRIRVVEKA 117 (118)
T ss_dssp E-EEEEEECCC
T ss_pred E-EEEEEEcCC
Confidence 6 777776653
No 212
>3bqu_C 3H6 FAB light chain; beta sheet, immune system; 3.00A {Mus musculus}
Probab=99.69 E-value=1.5e-17 Score=116.98 Aligned_cols=164 Identities=14% Similarity=0.275 Sum_probs=88.7
Q ss_pred CCCeEEeCCCccEEeeCCeEEEEcccCCCCCCcEEEEeCC--EEe----------cCCCCCe-----------eEEeec-
Q psy2441 28 GFPQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREM--LPV----------DTSRNPR-----------YNLLTS- 83 (212)
Q Consensus 28 ~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~k~g--~~l----------~~~~~~~-----------~~~~~~- 83 (212)
..+.+...|..+.+.+|+++.|.|.+.+.|.+.+.|||++ ..+ ......| +.+...
T Consensus 22 ~~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~ 101 (233)
T 3bqu_C 22 AETTVTQSPASLSMSIGEKVTIRCITSTDIDDDMNWYQQKPGEPPRLLISDGNTLRPGVPSRFSSSGYGTDFVFTIENML 101 (233)
T ss_dssp -CCCEEEECSBC-------CCEEEEEEEEESSCEEEEEECTTSCCEEEECTTSCBCTTSCTTCCCCEEEEEEEEC-----
T ss_pred cceeEEEcCCeEEEecCCCEEEEEecCCcCCCeEEEEEECCCCCcEEEEEcCCccCCCCCccEEeeccCCEEEEEECCCC
Confidence 3456667788889999999999999988777889999853 111 0000112 222222
Q ss_pred -CCCCeEEEeeeCCc-------cceeEEeecCCCCCCCccccCCcceeEecCCcEEEEEeeeeC-CCC-ceEEEeCCEEe
Q psy2441 84 -GAPGTYIKIKPNLF-------SPLSVYSADKIPPGFPQITEAPSTKVVEISHTTVLHCSASGN-PPP-KISWIREMLPV 153 (212)
Q Consensus 84 -~~~g~~l~i~~~~~-------~~~~v~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~-p~~-~i~W~~~~~~~ 153 (212)
+|.|.|.|...... ..+.|.. ...+|.+...+....+.+|+.+.|.|.+.+. |.+ .+.|++++..+
T Consensus 102 ~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~----~~~~p~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~~ 177 (233)
T 3bqu_C 102 SEDVADYYCLQSDNLPYTFGGGTNLEIKR----ADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSER 177 (233)
T ss_dssp CCCCSEEEEEECSSSSCCBCCCCBC---C----CCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCEEEEEEEC----
T ss_pred HHHCEEEEEEEecCCceeecCCEEEEEeC----CCCCCEEEEeCCCHHhhcCCceEEEEEEccccCCceEEEEEECCeeC
Confidence 48999999886522 1333322 1123555543332223469999999999885 443 79999999876
Q ss_pred cCCCCCceEEc--CCCC---ceeEEEcCCCCCCCeeEEEEEEccccc
Q psy2441 154 DTSRNPRYNLL--TSGA---PGALQITNSIEEDQGKYECVAENEVGT 195 (212)
Q Consensus 154 ~~~~~~~~~~~--~~~~---~~~l~i~~~~~~d~g~y~C~a~n~~g~ 195 (212)
........... .++. .+.|.|.....+|.|.|+|.|.|....
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~ 224 (233)
T 3bqu_C 178 QNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTST 224 (233)
T ss_dssp -CCEEEEECCCCTTTCCEEEEEEEEEEHHHHHTCCCEEEEEEEC---
T ss_pred CCCceEecCCccCCCCCEEEEEEEEECHHHhCCCCCEEEEEEeCCCC
Confidence 54200000011 1111 246888888889999999999997544
No 213
>1ccz_A Protein (CD58); LFA-3, glycoprotein; HET: NAG; 1.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1ci5_A 1qa9_B
Probab=99.69 E-value=1.4e-16 Score=106.84 Aligned_cols=143 Identities=13% Similarity=0.157 Sum_probs=87.7
Q ss_pred ccEEeeCCeEEEEcccCCCCCCcEEEEeCCEEecCC----------CCCeeEE---------eec--CCCCeEEEeeeCC
Q psy2441 38 TKVVEISHTTVLHCSASGNPPPKISWIREMLPVDTS----------RNPRYNL---------LTS--GAPGTYIKIKPNL 96 (212)
Q Consensus 38 ~~~v~~g~~v~l~C~~~~~p~~~v~W~k~g~~l~~~----------~~~~~~~---------~~~--~~~g~~l~i~~~~ 96 (212)
.+.+.+|++|+|.|.+.+ |.+.|.|+|++..+... ...|+.+ ... .|.|.|.|.....
T Consensus 4 ~v~~~~G~~VtL~c~~~~-~~~~i~W~~~~~~i~~~~~~~~~~~~~~~~R~~~~~~~~sL~I~~v~~~DsG~Y~C~~~n~ 82 (171)
T 1ccz_A 4 QIYGVVYGNVTFHVPSNV-PLKEVLWKKQKDKVAELENSEFRAFSSFKNRVYLDTVSGSLTIYNLTSSDEDEYEMESPNI 82 (171)
T ss_dssp EEEEETTCCEEECCCCSS-CCSCEEEEETTEEEEEEETTEEEECGGGTTSEEECTTTCCEEECSCCGGGCEEEEEECTTC
T ss_pred EEEEEcCCCEEEcCCCCC-CcceEEEEeCCcEEEEEcCCCcccccccCCcEEEeCCCCeEEECCCChhhCceEEEEEeCC
Confidence 467889999999999954 78899999988643210 0123332 221 3677777766542
Q ss_pred ccceeEEeecCCCCCCCccccCCcceeEecCCcEEEEEeeeeCCCCceEEEeCCEEecCCCCCceEEcCCCCceeEEEcC
Q psy2441 97 FSPLSVYSADKIPPGFPQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREMLPVDTSRNPRYNLLTSGAPGALQITN 176 (212)
Q Consensus 97 ~~~~~v~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~ 176 (212)
.....+...+..++..|.+... .....|.|.+.+.|.|.+.|++++..+.... . ..|.+.
T Consensus 83 ~~~~~~~L~V~~~~~~p~i~~~--------~~~~~L~C~~~~~p~p~i~W~~~~~~l~~~~--------~---~~l~~~- 142 (171)
T 1ccz_A 83 TDTMKFFLYVLEMVSKPMIYWE--------CSNATLTCEVLEGTDVELKLYQGKEHLRSLR--------Q---KTMSYQ- 142 (171)
T ss_dssp CSCEEEEEEEECCCCCCEEEEE--------TTTTEEEEECSSCSSCEEEEEETTEEEEEES--------S---SEEEEE-
T ss_pred CCcEEEEEEEECcCCCCEEEEe--------cCCcEEEEEeCCCCCcEEEEEECCEECcCCc--------c---eEEEEe-
Confidence 2222211111111112332211 1123799999998999999999998876421 1 234443
Q ss_pred CCCCCCeeEEEEEEcccccceecceEE
Q psy2441 177 SIEEDQGKYECVAENEVGTEYSPSTML 203 (212)
Q Consensus 177 ~~~~d~g~y~C~a~n~~g~~~~~~~~l 203 (212)
...|.|.|+|.|.|..|..... +.|
T Consensus 143 -~~~~~g~Y~C~a~N~~~~~~~~-~~l 167 (171)
T 1ccz_A 143 -WTNLRAPFKCKAVNRVSQESEM-EVV 167 (171)
T ss_dssp -CSCCSSCEEEEEEETTEEEEEE-ECC
T ss_pred -ccCCCceEEEEEEcccCcccce-eEE
Confidence 3678899999999999887654 443
No 214
>3ux9_B SCFV antibody; five helices, long loop connecting helix, hydrophobic intera cytokine-immune system complex; 2.80A {Homo sapiens}
Probab=99.68 E-value=9.4e-16 Score=109.25 Aligned_cols=156 Identities=18% Similarity=0.251 Sum_probs=94.7
Q ss_pred CCccEEeeCCeEEEEcccCCC--CCCcEEEEeCC--EE---ecC-------CCCCeeE-----------Eeec--CCCCe
Q psy2441 36 PSTKVVEISHTTVLHCSASGN--PPPKISWIREM--LP---VDT-------SRNPRYN-----------LLTS--GAPGT 88 (212)
Q Consensus 36 ~~~~~v~~g~~v~l~C~~~~~--p~~~v~W~k~g--~~---l~~-------~~~~~~~-----------~~~~--~~~g~ 88 (212)
|....+.+|++++|.|.+.+. +.+.+.|||++ .. +.. ....|+. |... +|.|.
T Consensus 9 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~ 88 (256)
T 3ux9_B 9 PPSVSGAPGQRVTISCSGSSSNIGSNYVSWYQQLPGTAPKLLIYDNNQRPSGVPDRFSGSKSGTSASLAITGLQSEDEAD 88 (256)
T ss_dssp CSEEEECTTCCEEEEEECCTTTTTTSCCEEEEECTTSCCEEEEBTTTBCCTTCCTTEEEEEETTEEEEEECSCCGGGCEE
T ss_pred CCcEEEcCCCcEEEEEecCCCCCCCceEEEEEECCCCCCEEEEEecCCCCCCcCCcEEEEccCCEEEEEECCCChhhCEE
Confidence 445788999999999999876 77889999942 11 100 0112333 2222 37888
Q ss_pred EEEeeeCC---------ccceeEEeecCCCC--------------CCCccccCCcceeEecCCcEEEEEeeeeCC--CCc
Q psy2441 89 YIKIKPNL---------FSPLSVYSADKIPP--------------GFPQITEAPSTKVVEISHTTVLHCSASGNP--PPK 143 (212)
Q Consensus 89 ~l~i~~~~---------~~~~~v~~~~~~~~--------------~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p--~~~ 143 (212)
|.|..... ...+.|.......+ ..+.+ ..+....+.+|+.+.|.|.+.+.+ .+.
T Consensus 89 Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~~G~~v~L~C~~~~~~~~~~~ 167 (256)
T 3ux9_B 89 YYCQVRDNNENEWVFGGGTKLTVLGSGGSTITSYNVYYTKLSSSGSEVQL-VESGGGLVQPGGSLRLSCAASGFTFSSYA 167 (256)
T ss_dssp EEEEEEETTTTEEEECCCEEEEEC----------------------CCEE-EEECCEEECTTCCEEEEEEEESSCGGGSE
T ss_pred EEEEEEECCCCceEECCCEEEEEECCCCCcCccceeEEeecCCCccceeE-EcCCCeEEcCCCeEEEEEEEeCCcccccE
Confidence 88876542 12333332110000 00112 222334588899999999998876 679
Q ss_pred eEEEeC--CEEec------C---------CCCCceEEcCC--CCceeEEEcCCCCCCCeeEEEEEEcc
Q psy2441 144 ISWIRE--MLPVD------T---------SRNPRYNLLTS--GAPGALQITNSIEEDQGKYECVAENE 192 (212)
Q Consensus 144 i~W~~~--~~~~~------~---------~~~~~~~~~~~--~~~~~l~i~~~~~~d~g~y~C~a~n~ 192 (212)
+.|+++ +..+. . ....++....+ ....+|.|.++..+|+|.|.|.|.|.
T Consensus 168 v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~ 235 (256)
T 3ux9_B 168 MSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARYID 235 (256)
T ss_dssp EEEEEECTTCCEEEEEEECSSSSCEEECGGGTTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEEET
T ss_pred EEEEEECCCCCcEEEEEEccCCCceecCccccceEEEEecCCCCEEEEEECCCChhhCEEEEEEEEcC
Confidence 999985 32211 0 01124444322 22457999999999999999999985
No 215
>2gjj_A A21 single-chain antibody fragment against ERBB2; IG family, SCFV, immune system; 2.10A {Mus musculus} PDB: 3h3b_C
Probab=99.68 E-value=2.7e-15 Score=107.45 Aligned_cols=164 Identities=17% Similarity=0.262 Sum_probs=101.6
Q ss_pred CCeEEeCCCccEEeeCCeEEEEcccCCCC------CCcEEEEeC--CEE---ec-------CCCCCeeEEee--------
Q psy2441 29 FPQITEAPSTKVVEISHTTVLHCSASGNP------PPKISWIRE--MLP---VD-------TSRNPRYNLLT-------- 82 (212)
Q Consensus 29 ~p~~~~~~~~~~v~~g~~v~l~C~~~~~p------~~~v~W~k~--g~~---l~-------~~~~~~~~~~~-------- 82 (212)
.+.+...|..+.+.+|+.++|.|.+.+.+ .+.+.|||+ |.. +. .....|+.+..
T Consensus 5 ~~~v~q~p~~v~v~~G~~v~L~C~~~~~~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~L~ 84 (264)
T 2gjj_A 5 DIVLTQTPSSLPVSVGEKVTMTCKSSQTLLYSNNQKNYLAWYQQKPGQSPKLLISWAFTRKSGVPDRFTGSGSGTDFTLT 84 (264)
T ss_dssp CCCEEEECSEEEEETTCCEEEEEEESSCCEETTTTEECEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEE
T ss_pred ccceEecCCeEEecCCCcEEEEeEcCCcccccccCCceEEEEEECCCCCcEEEEEecccCCCCCCccEEEecCCCEEEEE
Confidence 45667778888999999999999998877 678999995 221 11 00123444321
Q ss_pred ---c--CCCCeEEEeeeCC-------ccceeEEeecC-----------CCCCCCcc-ccCCcceeEecCCcEEEEEeeee
Q psy2441 83 ---S--GAPGTYIKIKPNL-------FSPLSVYSADK-----------IPPGFPQI-TEAPSTKVVEISHTTVLHCSASG 138 (212)
Q Consensus 83 ---~--~~~g~~l~i~~~~-------~~~~~v~~~~~-----------~~~~~p~~-~~~~~~~~~~~g~~~~l~C~~~~ 138 (212)
. +|.|.|.|..... ...+.|..... .....|.+ ...+....+.+|+.+.|.|.+.+
T Consensus 85 I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~~ 164 (264)
T 2gjj_A 85 IGSVKAEDLAVYYCQQYSNYPWTFGGGTRLEIKRGGGGSGGGGSGGGGSGGGGSEVQLQQSGPEVVKTGASVKISCKASG 164 (264)
T ss_dssp ESSCCGGGCEEEEEEECSSSSCEECCCEEEEEECC-------------------CCEEEECCCEEECTTCCEEEEEEEES
T ss_pred ECCCCHHHCEEEEEEEecCCccEecCCEEEEEEcCCcccccccccccccccccCcEEEeCCCCEEEcCCCcEEEEEEEeC
Confidence 1 3788888876652 12344432100 00001222 12223346889999999999988
Q ss_pred CCC--CceEEEeCC--EE---ec---CC---------CCCceEEc--CCCCceeEEEcCCCCCCCeeEEEEEEcc
Q psy2441 139 NPP--PKISWIREM--LP---VD---TS---------RNPRYNLL--TSGAPGALQITNSIEEDQGKYECVAENE 192 (212)
Q Consensus 139 ~p~--~~i~W~~~~--~~---~~---~~---------~~~~~~~~--~~~~~~~l~i~~~~~~d~g~y~C~a~n~ 192 (212)
.+. +.+.|+++. .. +. .. ...++.+. .......|.|.++..+|+|.|.|.+.|.
T Consensus 165 ~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~ 239 (264)
T 2gjj_A 165 YSFTGYFINWVKKNSGKSPEWIGHISSSYATSTYNQKFKNKAAFTVDTSSSTAFMQLNSLTSEDSADYYCVRSGN 239 (264)
T ss_dssp SCGGGSEEEEEEECTTSCCEEEEEEETTTCCEEECGGGTTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEECS
T ss_pred CccCCeEEEEEEECCCCCcEEEEEEeccCcccccCcccCCceEEEEcCCCCEEEEEECcCCcccCEEEEEEEecC
Confidence 764 799999863 11 10 00 02333332 2223478999999999999999999995
No 216
>3d9a_H Heavy chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_H 1gpo_H 3ks0_H* 1dqd_H 1ndm_B 1nak_H 1dqq_B 1dqm_H 1dqj_B 1nby_B 1nbz_B 1xgu_B 1ndg_B 1xgt_B 1xgp_B 1xgq_B 1xgr_B 1s5i_H 1f8t_H 1f90_H ...
Probab=99.68 E-value=2.2e-16 Score=109.22 Aligned_cols=157 Identities=18% Similarity=0.279 Sum_probs=98.2
Q ss_pred CCccEEeeCCeEEEEcccCCCC--CCcEEEEeCC--EEec--------------CCCCCeeEEee-------------c-
Q psy2441 36 PSTKVVEISHTTVLHCSASGNP--PPKISWIREM--LPVD--------------TSRNPRYNLLT-------------S- 83 (212)
Q Consensus 36 ~~~~~v~~g~~v~l~C~~~~~p--~~~v~W~k~g--~~l~--------------~~~~~~~~~~~-------------~- 83 (212)
|....+.+|+++.|.|.+.+.+ .+.+.|||++ ..+. .....|+.+.. .
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~ 86 (210)
T 3d9a_H 7 SGPSLVKPSQTLSLTCSVTGDSITSDYWSWIRKFPGNRLEYMGYVSYSGSTYYNPSLKSRISITRDTSKNQYYLDLNSVT 86 (210)
T ss_dssp ESCSEECTTSCEEEEEEEESSCGGGSCEEEEEEETTTEEEEEEEECTTSCEEECGGGTTTEEEEEEGGGTEEEEEECSCC
T ss_pred CCCEEecCCCcEEEEEEEecccCCCCcEEEEEeCCCCCcEEEEEEcCCCCeEECcccCceEEEEecCCCCEEEEEECCCC
Confidence 5667899999999999998765 3789999852 2110 00123444332 1
Q ss_pred -CCCCeEEEeeeCC-----ccceeEEeecCCCCCCCccccCCcceeEecCCcEEEEEeeeeC-CCC-ceEEEeCCEEecC
Q psy2441 84 -GAPGTYIKIKPNL-----FSPLSVYSADKIPPGFPQITEAPSTKVVEISHTTVLHCSASGN-PPP-KISWIREMLPVDT 155 (212)
Q Consensus 84 -~~~g~~l~i~~~~-----~~~~~v~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~-p~~-~i~W~~~~~~~~~ 155 (212)
.|.|.|.|..... ...+.|.. ..+.+|.+...+....+..|+.+.|.|.+.+. |.| .+.|++++..+..
T Consensus 87 ~~D~G~Y~C~~~~~~~~~~~~~l~V~~---~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~~~~~~~ 163 (210)
T 3d9a_H 87 TEDTATYYCANWDGDYWGQGTLVTVSA---AKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGV 163 (210)
T ss_dssp GGGCEEEEEEETTSSCBCCCEEEEECC---CCCBCCEEEEECCTTSCCCSSEEEEEEEEEEEBSSCCEEEEGGGTBCTTE
T ss_pred cccCEEEEEEEecCcccccceEEEecc---CCCCCCEEEEecCCcccccCCcEEEEEEEeeEecCCcEEEEeeCCcccce
Confidence 3777888876652 12233321 11223444433322335679999999999886 878 9999998875321
Q ss_pred CCCCceEEcCCCC---ceeEEEcCCCCCCCeeEEEEEEccccccee
Q psy2441 156 SRNPRYNLLTSGA---PGALQITNSIEEDQGKYECVAENEVGTEYS 198 (212)
Q Consensus 156 ~~~~~~~~~~~~~---~~~l~i~~~~~~d~g~y~C~a~n~~g~~~~ 198 (212)
....... .++. .+.|.|.+...+| |.|+|.|.|..|....
T Consensus 164 ~~~~~~~--~~~~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~~~~~ 206 (210)
T 3d9a_H 164 HTFPAVL--QSDLYTLSSSVTVPSSTWPS-ETVTCNVAHPASSTKV 206 (210)
T ss_dssp EECCCEE--ETTEEEEEEEEEEEGGGTTT-SCCEEEEEEGGGTEEE
T ss_pred EEcCCcc--CCCcEEEEEEEEEcHHHcCC-CcEEEEEEeCCCCccc
Confidence 1011111 1110 2568998888877 9999999999887643
No 217
>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A
Probab=99.68 E-value=1.5e-15 Score=114.44 Aligned_cols=186 Identities=13% Similarity=0.083 Sum_probs=118.2
Q ss_pred ceeeEEEeeccCCCcceecccccCCCCCeEEeCCCccEEeeCCeEEEEcccCCCCCCcEEEEeCCEEecCCCCCeeE---
Q psy2441 3 IGTYIKIKPNLFSPLSVYSADKIPPGFPQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREMLPVDTSRNPRYN--- 79 (212)
Q Consensus 3 ~g~Y~C~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~k~g~~l~~~~~~~~~--- 79 (212)
+|.|+|.+.|..|... ....+.+..+|.+...+....+.+|+.+.|.|.+.+.|.+.+.|+|+|..+......++.
T Consensus 75 ~G~Y~C~a~n~~g~~~-~~~~l~V~~~P~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~i~W~~~g~~l~~~~~~~~~~~~ 153 (389)
T 2jll_A 75 SGRYDCEAASRIGGHQ-KSMYLDIEYAPKFISNQTIYYSWEGNPINISCDVKSNPPASIHWRRDKLVLPAKNTTNLKTYS 153 (389)
T ss_dssp CEEEEEEEECSSCEEE-EEEEEEEEEEEEECCSCCEEEECTTCCEEEEECEEEESCCEEEEEETTEESSCTTCTTEEEEE
T ss_pred CEEEEEEEEeCCCCcc-eEEEEEEEeCCEEecCcceEEeccCCEEEEEEEEEecCCCeEEEEECCccCCcccCceEEEec
Confidence 5899999999888754 335555667888776666667889999999999999999999999999998765322332
Q ss_pred --------Eeec--CCCCeEEEeeeCCccce--eEEeecCCCCCCCccccCCcceeEecCCcEEEEEeeeeC----CCC-
Q psy2441 80 --------LLTS--GAPGTYIKIKPNLFSPL--SVYSADKIPPGFPQITEAPSTKVVEISHTTVLHCSASGN----PPP- 142 (212)
Q Consensus 80 --------~~~~--~~~g~~l~i~~~~~~~~--~v~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~----p~~- 142 (212)
+... .|.|.|.|...+..... .+.......+.+|... ......+..+.|.|..... |..
T Consensus 154 ~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v~~~P~~P~~~----~~~~~~~~~~~l~w~~p~~~~g~pi~~ 229 (389)
T 2jll_A 154 TGRKMILEIAPTSDNDFGRYNCTATNHIGTRFQEYILALADVPSSPYGV----KIIELSQTTAKVSFNKPDSHGGVPIHH 229 (389)
T ss_dssp CSSCEEEEECCCSTTSSEEEEEEEEETTEEEEEEEEEEECCCCCCCEEE----EEEEECSSCEEEEEECCSCCTTSCEEE
T ss_pred cCCEEEEEECCCChhhCEEEEEEEEcCCCcEEEEEEEEecCCCCCCcce----EEeeccCCEEEEEEeCCCCCCCcceEE
Confidence 2222 37788888776622211 1111111222222110 1122335778999975322 222
Q ss_pred -ceEEEeCCEEecCCCCCceEEcCCCCceeEEEcCCCCCCCeeEEEEEEcccccceec
Q psy2441 143 -KISWIREMLPVDTSRNPRYNLLTSGAPGALQITNSIEEDQGKYECVAENEVGTEYSP 199 (212)
Q Consensus 143 -~i~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~n~~g~~~~~ 199 (212)
.+.|.+++.... ...........+.|.++...+.+.|.|.|.|..|.....
T Consensus 230 y~v~~~~~~~~~~------~~~~~~~~~~~~~i~~l~~~~~y~~~v~A~N~~G~~~~s 281 (389)
T 2jll_A 230 YQVDVKEVASEIW------KIVRSHGVQTMVVLNNLEPNTTYEIRVAAVNGKGQGDYS 281 (389)
T ss_dssp EEEEEEETTCSCC------EEEECSTTCSEEEECSCCTTCEEEEEEEEEESSCBCCCC
T ss_pred EEEEEEECCCccc------EEeeccCCcceEEECCccCCCEEEEEEEEEcCCccCCCC
Confidence 456776553111 111112223679999999999999999999998876544
No 218
>1mju_H Immunoglobulin MS6-12; catalytic antibody, ester hydrolysis, esterolytic, FAB, immune system; 1.22A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mjj_B 1mie_H 1mj7_H* 1mj8_H 1mh5_B* 4aeh_H 2y5t_A 2vwe_E 2op4_H 2ntf_H 3loh_C 1e4x_H 2vl5_A 1e4x_I 1e4w_H 3opz_H 3oz9_H 1plg_H 1hi6_B 1cfn_B ...
Probab=99.68 E-value=2.6e-16 Score=110.28 Aligned_cols=169 Identities=15% Similarity=0.198 Sum_probs=96.3
Q ss_pred CCCccEEeeCCeEEEEcccCCCC--CCcEEEEeCC--EE---e---cC---------CCCCeeEEeec------------
Q psy2441 35 APSTKVVEISHTTVLHCSASGNP--PPKISWIREM--LP---V---DT---------SRNPRYNLLTS------------ 83 (212)
Q Consensus 35 ~~~~~~v~~g~~v~l~C~~~~~p--~~~v~W~k~g--~~---l---~~---------~~~~~~~~~~~------------ 83 (212)
.|....+.+|++++|.|.+.+.+ .+.+.|||++ .. + .. ....|+.+...
T Consensus 6 qp~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~ 85 (227)
T 1mju_H 6 QPGAELVKPGASVKLSCKASGYTFTNYWINWVKQRPGQGLEWIGNIYPGSSYTHYNEKFKNKATLTVDTSSSTAYMQLSS 85 (227)
T ss_dssp CCSEEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEEETTTTEEEECGGGTTTEEEEEETTTTEEEEEECS
T ss_pred CCCCeEEcCCCCEEEEEEecCCccccceEEEEEeCCCCCcEEEEEEeccCCceeeCCccCCcEEEEEeCCCCeEEEEECC
Confidence 45667899999999999998776 5789999853 21 1 00 00245544321
Q ss_pred ---CCCCeEEEeeeCC-------ccceeEEeecCCCCCCCccccCCcceeEecCCcEEEEEeeeeC-CCC-ceEEEeCCE
Q psy2441 84 ---GAPGTYIKIKPNL-------FSPLSVYSADKIPPGFPQITEAPSTKVVEISHTTVLHCSASGN-PPP-KISWIREML 151 (212)
Q Consensus 84 ---~~~g~~l~i~~~~-------~~~~~v~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~-p~~-~i~W~~~~~ 151 (212)
+|.|.|.|..... ...+.|... +...|.+........+.+|+.+.|.|.+.+. |.+ .+.|++++.
T Consensus 86 v~~~D~G~Y~C~~~~~~~~~~~~~~~L~V~~~---~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~g~ 162 (227)
T 1mju_H 86 LTSDDSAVYYCANKLGWFPYWGQGTLVTVSAA---KTTAPSVYPLAPVCGDTSGSSVTLGCLVKGYFPEPVTLTWNSGSL 162 (227)
T ss_dssp CCGGGCEEEEEEEEETTEEEECCCEEEEECSS---CCBCCEEEEECCCC------CEEEEEEEEEEBSSCCEEEEGGGTB
T ss_pred CCcccCEEEEEEECCCCceEEcCcEEEEEcCC---CCCCCEEEEecCCccccCCCcEEEEEEeecEeCCCeEEEEecCCC
Confidence 3677777766542 112333210 1122444332222235679999999999885 766 999999886
Q ss_pred EecCCCCCceEEcCCC--CceeEEEcCCCCCCCeeEEEEEEcccccceecceEEEEecceec
Q psy2441 152 PVDTSRNPRYNLLTSG--APGALQITNSIEEDQGKYECVAENEVGTEYSPSTMLYVKGTQVD 211 (212)
Q Consensus 152 ~~~~~~~~~~~~~~~~--~~~~l~i~~~~~~d~g~y~C~a~n~~g~~~~~~~~l~v~~~~~p 211 (212)
.+......... ..+. ..+.|.|.+...+| |.|+|.|.|..+... ....+.+...|
T Consensus 163 ~~~~~~~~~~~-~~g~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~~~~---~~~~~~~~~~p 219 (227)
T 1mju_H 163 SSGVHTFPAVL-QSDLYTLSSSVTVTSSTWPS-QSITCNVAHPASSTK---VDKKIEPRGPT 219 (227)
T ss_dssp CTTEEECCCEE-ETTEEEEEEEEEECTTTTTT-SCCEEEEEEGGGTEE---EEEECCCCCC-
T ss_pred cCCcEECCcee-cCCeEEEEEEEEEchhhcCC-CeEEEEEEECCCCcc---eEEEeCCCCCC
Confidence 54211011111 0000 02578999988888 999999999766544 33444444444
No 219
>2yr3_A Myosin light chain kinase, smooth muscle; IG domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.68 E-value=1.8e-16 Score=96.59 Aligned_cols=88 Identities=27% Similarity=0.524 Sum_probs=72.0
Q ss_pred CccccCCcceeEecCCcEEEEEeeeeCCCCceEEEeCCEEecCCCCCceEEcCCCCceeEEEcCCCCCCCeeEEEEEEcc
Q psy2441 113 PQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREMLPVDTSRNPRYNLLTSGAPGALQITNSIEEDQGKYECVAENE 192 (212)
Q Consensus 113 p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~n~ 192 (212)
|.+...+....+.+|+.+.|.|.+.+.|.|.+.|++++..+... ... .... ...|.|.++..+|+|.|.|.|.|.
T Consensus 12 P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~g~~~~~~--~~~-~~~~--~~~L~i~~v~~~D~G~Y~C~a~N~ 86 (99)
T 2yr3_A 12 PSFSSVLKDCAVIEGQDFVLQCSVRGTPVPRITWLLNGQPIQYA--RST-CEAG--VAELHIQDALPEDHGTYTCLAENA 86 (99)
T ss_dssp EEEEECCCCEEECTTCCEEEECEEEEESCCCCEEEESSSBCSSC--CCE-EETT--EEEEEECSCCTTCCBCEEEEEECS
T ss_pred CceeecCCCCEEeCCCeEEEEEEEeeeCCCeEEEEECCEECccc--ceE-eeCC--eEEEEECCCChhhCEEEEEEEEEC
Confidence 67777777788999999999999999999999999999877653 222 1122 278999999999999999999999
Q ss_pred cccceecceEEEEe
Q psy2441 193 VGTEYSPSTMLYVK 206 (212)
Q Consensus 193 ~g~~~~~~~~l~v~ 206 (212)
.|..... +.|.|+
T Consensus 87 ~g~~~~~-~~l~V~ 99 (99)
T 2yr3_A 87 LGQVSCS-AWVTVH 99 (99)
T ss_dssp SCEEEEE-CCEEEC
T ss_pred CCeEEEE-EEEEEC
Confidence 9988666 666663
No 220
>3fku_X Neutralizing antibody F10; influenza, hemagglutinin, SCFV, F membrane, envelope protein, fusion protein, membrane, trans virion; HET: NAG BMA; 3.20A {Homo sapiens}
Probab=99.67 E-value=2.2e-15 Score=108.85 Aligned_cols=175 Identities=21% Similarity=0.303 Sum_probs=104.3
Q ss_pred eEEeCCCccEEeeCCeEEEEcccCCC--CCCcEEEEeCC--EEe------c-C--------CCCCeeEEe----------
Q psy2441 31 QITEAPSTKVVEISHTTVLHCSASGN--PPPKISWIREM--LPV------D-T--------SRNPRYNLL---------- 81 (212)
Q Consensus 31 ~~~~~~~~~~v~~g~~v~l~C~~~~~--p~~~v~W~k~g--~~l------~-~--------~~~~~~~~~---------- 81 (212)
.+.. |....+.+|++++|.|.+.+. +.+.+.|||.. ..+ . . ....|+.+.
T Consensus 3 ~v~q-p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL 81 (280)
T 3fku_X 3 QLVQ-SGAEVKKPGSSVKVSCTSSEVTFSSFAISWVRQAPGQGLEWLGGISPMFGTPNYAQKFQGRVTITADQSTRTAYM 81 (280)
T ss_dssp CEEC-CCCCEECTTCCEEEEEEECCSCCTTSCEEECCBCSSSCCCCCEEECTTTCCEEECGGGTTTCEEEEETTTTEEEE
T ss_pred eEEc-CCCEEECCCCcEEEEEEeeccCCCCeEEEEEEeCCCCCCEEEEEEeccCCccccCcccCCcEEEEEeCCCCEEEE
Confidence 3445 778899999999999999775 55789999842 110 0 0 001233333
Q ss_pred ---ec--CCCCeEEEeeeCC---------------ccceeEEe-ecC-------CCCCCCccccCCcceeEecCCcEEEE
Q psy2441 82 ---TS--GAPGTYIKIKPNL---------------FSPLSVYS-ADK-------IPPGFPQITEAPSTKVVEISHTTVLH 133 (212)
Q Consensus 82 ---~~--~~~g~~l~i~~~~---------------~~~~~v~~-~~~-------~~~~~p~~~~~~~~~~~~~g~~~~l~ 133 (212)
.. +|.|.|.|..... ...+.|.. ... ....++.+...+. ..+.+|+++.|.
T Consensus 82 ~I~~v~~~DsG~Y~C~~~~~~~~~g~~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~v~~~p~-~~v~~G~~v~L~ 160 (280)
T 3fku_X 82 DLRSLRSEDTAVYYCARSPSYICSGGTCVFDHWGQGTLVTVSSGGGGSGGGGSGGGGIQPGLTQPPS-VSKGLRQTATLT 160 (280)
T ss_dssp EECSCCSTTCEECCEEECSSSSSSSTTCCCCEECCCCEEEECC--------------CCCSBBCCSE-EEECTTCCEEEE
T ss_pred EECCCChhhCEEEEEEEecCCccccccccccEECCCEEEEEcCCCCccCCCCCCceEeeeEEEeCCc-EEEecCCCEEEE
Confidence 21 3777777776543 11222221 000 0001244555555 788999999999
Q ss_pred Eeeee-CC-CCceEEEeC--CEEecC----------CCCCceEEcCCCCceeEEEcCCCCCCCeeEEEEEEcccc--cce
Q psy2441 134 CSASG-NP-PPKISWIRE--MLPVDT----------SRNPRYNLLTSGAPGALQITNSIEEDQGKYECVAENEVG--TEY 197 (212)
Q Consensus 134 C~~~~-~p-~~~i~W~~~--~~~~~~----------~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~n~~g--~~~ 197 (212)
|.+.+ .+ .+.+.|++. +..... ....++....+.....|.|.+++.+|+|.|.|.+.|..+ ...
T Consensus 161 C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~ 240 (280)
T 3fku_X 161 CTGNSNNVGNQGAAWLQQHQGHPPKLLSYRNNDRPSGISERFSASRSGNTASLTITGLQPEDEADYYCSTWDSSLSAVVF 240 (280)
T ss_dssp EECCCCCCCTTCCEEEEECSSSCCEESCCTTCCCCSSSCTTEEEEEETTEEEEEECSCCGGGCSEEEEEEEETTTTEEEE
T ss_pred EEecCCCCCCceEEEEEECCCCCCEEEEEeccccCCCCCCCEEEEccCCEEEEEECCCCHHHCEEEEEEEecCCCCceEE
Confidence 99987 44 379999973 221110 012344444333346799999999999999999998752 222
Q ss_pred ecceEEEEec
Q psy2441 198 SPSTMLYVKG 207 (212)
Q Consensus 198 ~~~~~l~v~~ 207 (212)
.....|.|..
T Consensus 241 g~~t~l~V~~ 250 (280)
T 3fku_X 241 GGGTKLTVLG 250 (280)
T ss_dssp BCCCEEEEC-
T ss_pred CCCEEEEECC
Confidence 2225666654
No 221
>1pz5_B Heavy chain of FAB (SYA/J6); antibody-antigen structure, peptide-carbohydrate mimicry, VA design, immune system; 1.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1m7d_B* 1m71_B* 1m7i_B* 1r24_B 1uz6_F 1uz8_B* 1clz_H*
Probab=99.67 E-value=4.2e-16 Score=108.58 Aligned_cols=154 Identities=17% Similarity=0.248 Sum_probs=97.1
Q ss_pred CCccEEeeCCeEEEEcccCCCC--CCcEEEEeCC--EE---ec---C--C---------CCCeeEEee------------
Q psy2441 36 PSTKVVEISHTTVLHCSASGNP--PPKISWIREM--LP---VD---T--S---------RNPRYNLLT------------ 82 (212)
Q Consensus 36 ~~~~~v~~g~~v~l~C~~~~~p--~~~v~W~k~g--~~---l~---~--~---------~~~~~~~~~------------ 82 (212)
|....+.+|++++|.|.+.+.+ .+.+.|||++ .. +. . . ...|+.+..
T Consensus 7 p~~~~~~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~ 86 (220)
T 1pz5_B 7 SGGGLVQPGGSMKLSCVASGFTFSNYWMEWVRQSPEKGLEWVAEIRLKSNNYATHYAESVKGRFTISRDDSKSSVYLQMN 86 (220)
T ss_dssp ECCEEECTTCCEEEEEEEESSCGGGSEEEEEEEETTTEEEEEEEECCGGGTTCEEECGGGTTTEEEEEEGGGTEEEEEEC
T ss_pred cCCEEEcCCCeEEEEEEEcCCccCCccEEEEEeCCCCCcEEEEEEEcCCCccccccCcccCCcEEEEEeCCCCeEEEEEc
Confidence 5567899999999999998765 6789999953 11 10 0 0 013444331
Q ss_pred -c--CCCCeEEEeeeCCc---------cceeEEeecCCCCCCCccccCCcceeEecCCcEEEEEeeeeC-CCC-ceEEEe
Q psy2441 83 -S--GAPGTYIKIKPNLF---------SPLSVYSADKIPPGFPQITEAPSTKVVEISHTTVLHCSASGN-PPP-KISWIR 148 (212)
Q Consensus 83 -~--~~~g~~l~i~~~~~---------~~~~v~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~-p~~-~i~W~~ 148 (212)
. .|.|.|.|...... ..+.|.. .+..+|.+...+....+.+|+.+.|.|.+.+. |.| .+.|++
T Consensus 87 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~---~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~ 163 (220)
T 1pz5_B 87 NLRAEDTGIYYCTRGGAVGAMDYWGQGTSVTVSS---ATTTAPSVYPLVPGCSDTSGSSVTLGCLVKGYFPEPVTVKWNY 163 (220)
T ss_dssp SCCGGGCEEEEEEEECTTSSEEEECCCEEEEECS---SCCBCCEEEEECCCSCCSCSSSEEEEEEEEEEBSSCCEEEEGG
T ss_pred cCCHHHCEEEEEEEecCCcccceECCCEEEEEcc---CCCCCCeEEEcccccccCCCCcEEEEEEEEEEeCCCeEEEEec
Confidence 1 37888888776532 1222221 12223544433322335679999999999987 888 999999
Q ss_pred CCEEe---cCC---CCCceEEcCCCCceeEEEcCCCCCCCeeEEEEEEccccccee
Q psy2441 149 EMLPV---DTS---RNPRYNLLTSGAPGALQITNSIEEDQGKYECVAENEVGTEYS 198 (212)
Q Consensus 149 ~~~~~---~~~---~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~n~~g~~~~ 198 (212)
++... ... ....+. . .+.|.|.+...++ |.|+|.|.|..|....
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~--~---~s~L~i~~~~~~~-g~Y~C~a~n~~~~~~~ 213 (220)
T 1pz5_B 164 GALSSGVRTVSSVLQSGFYS--L---SSLVTVPSSTWPS-QTVICNVAHPASKVDL 213 (220)
T ss_dssp GTCCTTEEECCCEEETTEEE--E---EEEEEECGGGTTT-SCCEEEEEEGGGTEEE
T ss_pred CCcccceEEcCCcccCCeEE--E---EEEEEEcchhcCC-ceEEEEEEECCccEee
Confidence 87631 110 001111 1 2678998888766 9999999999986543
No 222
>1waa_A Titin; metal binding protein, calmodulin-binding, cytoskeleton, immunoglobulin domain, muscle protein, phosphorylation, repeat; 1.80A {Homo sapiens} PDB: 1waa_E 1waa_F 1tit_A 1tiu_A 2rq8_A
Probab=99.67 E-value=1.1e-15 Score=91.91 Aligned_cols=88 Identities=20% Similarity=0.217 Sum_probs=71.0
Q ss_pred CCccccCCcceeEecCCcEEEEEeeeeCCCCceEEEeCCEEecCCCCCceEEcCCCCceeEEEcCCCCCCCeeEEEEEEc
Q psy2441 112 FPQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREMLPVDTSRNPRYNLLTSGAPGALQITNSIEEDQGKYECVAEN 191 (212)
Q Consensus 112 ~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~n 191 (212)
+|.|...+.+..+.+|+.+.|.|.+.+ +.+.+.|++++..+... .++.+..++....|.|.++..+|+|.|.|.|.|
T Consensus 5 ~~~~~~~~~~~~v~~G~~v~l~C~v~~-~~~~v~W~k~g~~i~~~--~~~~i~~~g~~~~L~I~~v~~~D~G~Y~C~a~n 81 (93)
T 1waa_A 5 LIEVEKPLYGVEVFVGETAHFEIELSE-PDVHGQWKLKGQPLAAS--PDCEIIEDGKKHILILHNCQLGMTGEVSFQAAN 81 (93)
T ss_dssp CCCEEECCCCEEEETTSCEEEEEEESS-SSCCCEEEETTEECCCB--TTEEEEEETTEEEEEECSCCGGGCEEEEEEETT
T ss_pred CcEeeccCcceEEeCCCCEEEEEEECC-CCCeEEEEECCEECcCC--CCEEEEEECCEEEEEECCCChhhCEEEEEEECC
Confidence 477777888889999999999999976 45789999999998775 556555554456899999999999999999988
Q ss_pred ccccceecceEEEEec
Q psy2441 192 EVGTEYSPSTMLYVKG 207 (212)
Q Consensus 192 ~~g~~~~~~~~l~v~~ 207 (212)
.. .. +.|.|++
T Consensus 82 ~~----~s-a~L~V~~ 92 (93)
T 1waa_A 82 TK----SA-ANLKVKE 92 (93)
T ss_dssp EE----EE-EEEEEEC
T ss_pred Cc----EE-EEEEEEc
Confidence 53 23 6666664
No 223
>1x9q_A SCFV, 4M5.3 anti-fluorescein single chain antibody fragment; VERY high affinity, antibody binding, electrostatics, directed evolution; HET: FLU; 1.50A {Homo sapiens}
Probab=99.67 E-value=1.5e-15 Score=108.98 Aligned_cols=166 Identities=17% Similarity=0.242 Sum_probs=100.7
Q ss_pred CCCCeEEeCCCccEEeeCCeEEEEcccCCCC-----CCcEEEEeCC--EE---ec-------CCCCCeeEEee-------
Q psy2441 27 PGFPQITEAPSTKVVEISHTTVLHCSASGNP-----PPKISWIREM--LP---VD-------TSRNPRYNLLT------- 82 (212)
Q Consensus 27 ~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p-----~~~v~W~k~g--~~---l~-------~~~~~~~~~~~------- 82 (212)
...+.+...|..+.+.+|++++|.|.+.+.+ .+.+.|||+. .. +. .....|+.+..
T Consensus 13 ~~~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L 92 (268)
T 1x9q_A 13 ASDVVMTQTPLSLPVSLGDQASISCRSSQSLVHSNGNTYLRWYLQKPGQSPKVLIYKVSNRVSGVPDRFSGSGSGTDFTL 92 (268)
T ss_dssp -CCCCEEEECSEECCCTTCCEEEEEEESSCCBCTTSCBCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEE
T ss_pred cccceEEeeCCeEEecCCCCEEEEeEecCCcccccCCceEEEEEECCCCCCEEEEEecCCCCCCCcccEEEEcCCCEEEE
Confidence 3556777778888899999999999998876 4789999852 11 11 00123444321
Q ss_pred ----c--CCCCeEEEeeeCC-------ccceeEEeecC-CCC-CCCc--------------cccCCcceeEecCCcEEEE
Q psy2441 83 ----S--GAPGTYIKIKPNL-------FSPLSVYSADK-IPP-GFPQ--------------ITEAPSTKVVEISHTTVLH 133 (212)
Q Consensus 83 ----~--~~~g~~l~i~~~~-------~~~~~v~~~~~-~~~-~~p~--------------~~~~~~~~~~~~g~~~~l~ 133 (212)
. +|.|.|.|..... ...+.|..... ..+ .+|. ....+....+.+|+.+.|.
T Consensus 93 ~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~L~V~~~~~~~~p~~pp~~~~~~~~~~~~~~v~~~~~~~~~v~~G~~v~L~ 172 (268)
T 1x9q_A 93 KINRVEAEDLGVYFCSQSTHVPWTFGGGTKLEIKSSADDAKKDAAKKDDAKKDDAKKDGGVKLDETGGGLVQPGGAMKLS 172 (268)
T ss_dssp EESSCCGGGCEEEEEEECSSSSCEECCCEEEC------------------------CGGGCEEEEECCEEECTTCCEEEE
T ss_pred EECCCChhHCEEEEEEEecCCCceEcCCEEEEEccCccCCCccccccccccccccccccceEEECCCceEecCCCcEEEE
Confidence 1 3788888876652 12233332111 000 0110 1222345678899999999
Q ss_pred EeeeeCCC--CceEEEeCC--EEec-----------------CCCCCceEEcCC--CCceeEEEcCCCCCCCeeEEEEEE
Q psy2441 134 CSASGNPP--PKISWIREM--LPVD-----------------TSRNPRYNLLTS--GAPGALQITNSIEEDQGKYECVAE 190 (212)
Q Consensus 134 C~~~~~p~--~~i~W~~~~--~~~~-----------------~~~~~~~~~~~~--~~~~~l~i~~~~~~d~g~y~C~a~ 190 (212)
|.+.+.+. +.+.|+++. .... .....++....+ ....+|.|.++..+|+|.|.|.+.
T Consensus 173 C~~~~~~~~~~~v~W~k~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~ 252 (268)
T 1x9q_A 173 CVTSGFTFGHYWMNWVRQSPEKGLEWVAQFRNKPYNYETYYSDSVKGRFTISRDDSKSSVYLQMNNLRVEDTGIYYCTGA 252 (268)
T ss_dssp EEEESSCGGGCEEEEEEEETTTEEEEEEEECCGGGTTCEEECTTTTTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEE
T ss_pred EEecCccccccEEEEEEeCCCCCcEEEEEEcccccccccccCCccCCeEEEEEeCCCCEEEEEECCCCHHHCEEEEEEEc
Confidence 99988764 789999842 2111 011244544322 123689999999999999999998
Q ss_pred cc
Q psy2441 191 NE 192 (212)
Q Consensus 191 n~ 192 (212)
|.
T Consensus 253 ~~ 254 (268)
T 1x9q_A 253 SY 254 (268)
T ss_dssp ET
T ss_pred cC
Confidence 74
No 224
>2ckn_A Basic fibroblast growth factor receptor 1; kinase, transferase, heparin-binding, nucleotide-binding, immunoglobulin domain, alternatice splicing; NMR {Mus musculus}
Probab=99.67 E-value=8.6e-16 Score=92.82 Aligned_cols=87 Identities=20% Similarity=0.341 Sum_probs=72.4
Q ss_pred CCCccccCCcceeEecCCcEEEEEeeeeCCCCceEEEeCCEEecCCCCCceEEcCCCCceeEEEcCCCCCCCeeEEEEEE
Q psy2441 111 GFPQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREMLPVDTSRNPRYNLLTSGAPGALQITNSIEEDQGKYECVAE 190 (212)
Q Consensus 111 ~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~ 190 (212)
.+|.+...+....+.+|+.+.|.|.+.+.| +.+.|++++..+... .++... + ..|.|.++..+|+|.|.|.|.
T Consensus 8 ~pp~~~~~~~~~~v~~G~~v~l~C~~~g~p-p~i~W~k~g~~~~~~--~~~~~~-~---~~L~i~~~~~~D~G~Y~C~a~ 80 (95)
T 2ckn_A 8 QPWGVPVEVESLLVHPGDLLQLRCRLRDDV-QSINWLRDGVQLVES--NRTRIT-G---EEVEVRDSIPADSGLYACVTS 80 (95)
T ss_dssp CSCCBTTBBCCEEECTTSCEEEECCEESSC-CEEEEEBTTBCCCCC--SSEEEC-S---SEEEESSCCGGGSEEEEEEEE
T ss_pred CCCEEEcCcceEEEcCCCeEEEEEECCCCC-CceEEEECCEecCCC--CCEEEe-C---CEEEECCCChHHCEEEEEEec
Confidence 346777777888899999999999999997 799999999887754 455443 3 689999999999999999999
Q ss_pred cccccceecceEEEE
Q psy2441 191 NEVGTEYSPSTMLYV 205 (212)
Q Consensus 191 n~~g~~~~~~~~l~v 205 (212)
|..|..... +.|.|
T Consensus 81 n~~g~~~~~-~~l~V 94 (95)
T 2ckn_A 81 SPSGSDTTY-FSVNV 94 (95)
T ss_dssp ETTEEEEEE-EEEEE
T ss_pred cCCCcEEEE-EEEEE
Confidence 999987666 66655
No 225
>4fom_A Poliovirus receptor-related protein 3; immunoglobulin-like domain, IG domain, cell adhesion; HET: NAG BMA MAN FUC; 3.93A {Homo sapiens}
Probab=99.67 E-value=8.1e-16 Score=112.37 Aligned_cols=167 Identities=13% Similarity=0.174 Sum_probs=100.8
Q ss_pred CccEEeeCCeEEEEcccCCC-CCCcEEEEeCCEEe---------------cCCCCC------------eeEEeec--CCC
Q psy2441 37 STKVVEISHTTVLHCSASGN-PPPKISWIREMLPV---------------DTSRNP------------RYNLLTS--GAP 86 (212)
Q Consensus 37 ~~~~v~~g~~v~l~C~~~~~-p~~~v~W~k~g~~l---------------~~~~~~------------~~~~~~~--~~~ 86 (212)
..+++.+|+++.|.|.+.+. +.+.|+|+|++... ...... .+.+... +|.
T Consensus 7 p~vtv~~G~~v~L~C~v~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~~v~~~D~ 86 (308)
T 4fom_A 7 PHVTAVWGKNVSLKCLIEVNETITQISWEKIHGKSSQTVAVHHPQYGFSVQGEYQGRVLFKNYSLNDATITLHNIGFSDS 86 (308)
T ss_dssp CSCEEETTSCEEECCBCCCSSCEEEEEEEEESSSCEEEEEEECSSSCEEECTTTTTTEEESCCSSSBCCEEECSCCGGGC
T ss_pred CEeEEEcCCcEEEEEEecCCCCCcEEEEEECCCCCCceEEEecCCCCceecCcccceEEeeccCCCceEEEEccCCHHHC
Confidence 35788999999999998654 44579999864211 111111 2333322 478
Q ss_pred CeEEEeeeCC-c--cceeEEeecCCCCCCCccccCCcceeEecCCcEEEEEee-eeCCCCceEEEeCCEEecCCCCCceE
Q psy2441 87 GTYIKIKPNL-F--SPLSVYSADKIPPGFPQITEAPSTKVVEISHTTVLHCSA-SGNPPPKISWIREMLPVDTSRNPRYN 162 (212)
Q Consensus 87 g~~l~i~~~~-~--~~~~v~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~-~~~p~~~i~W~~~~~~~~~~~~~~~~ 162 (212)
|.|.|..... . ....+.......+. +.+...+.......|+.+.|.|.+ .+.|.+.+.|++++..+... . .
T Consensus 87 G~Y~C~a~n~~~~~~~~~~~~~v~~~~~-~~~~~~~~~~~~~~~~~~~l~C~~~~g~P~~~i~W~~~~~~~~~~--~-~- 161 (308)
T 4fom_A 87 GKYICKAVTFPLGNAQSSTTVTVLVEPT-VSLIKGPDSLIDGGNETVAAICIAATGKPVAHIDWEGDLGEMEST--T-T- 161 (308)
T ss_dssp EEEEEEEEETTTEEEEEEEEEEEEBCCE-EEEEECSSCCCTTCSCEEEEEEEEEEEBSCCEEEECCCSSBCCEE--E-E-
T ss_pred EEEEEEEeeCCCcceeeeeEEEeeeccc-cccccccceeEEcCCceEEEEEEecCCcCCceEEEEECCcccccc--c-c-
Confidence 8888866441 1 11111111111111 112223333445568899999985 68999999999998776542 0 0
Q ss_pred EcCCCC---ceeEEEcCCCCCCCeeEEEEEEcccccceecceEEEEecce
Q psy2441 163 LLTSGA---PGALQITNSIEEDQGKYECVAENEVGTEYSPSTMLYVKGTQ 209 (212)
Q Consensus 163 ~~~~~~---~~~l~i~~~~~~d~g~y~C~a~n~~g~~~~~~~~l~v~~~~ 209 (212)
...+.. .+.|.|.++..+|.|.|+|.|.|..|..... ..+.+.+..
T Consensus 162 ~~~~~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~-~~~~l~V~~ 210 (308)
T 4fom_A 162 SFPNETATIISQYKLFPTRFARGRRITCVVKHPALEKDIR-YSFILDIQY 210 (308)
T ss_dssp ECTTSCEEEEEEEEECCCGGGTTCEEEEEEECTTCSSCEE-EEEECCCCE
T ss_pred eeeeecccccccceEEeeeecCCccEEEEEEccCCCCceE-EeEEEEEec
Confidence 111110 2579999999999999999999988776554 445544443
No 226
>3bfo_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1 (isoform 2); hydrolase, immunoglobulin domain, nucleus, protease; 1.15A {Homo sapiens}
Probab=99.67 E-value=1.1e-15 Score=91.50 Aligned_cols=84 Identities=25% Similarity=0.422 Sum_probs=69.6
Q ss_pred CccccCCcceeEecCCcEEEEEeeeeCCCCceEEEeCCEEecCCCCCceEEcCCCCceeEEEcCCCCCCCeeEEEEEEcc
Q psy2441 113 PQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREMLPVDTSRNPRYNLLTSGAPGALQITNSIEEDQGKYECVAENE 192 (212)
Q Consensus 113 p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~n~ 192 (212)
+.+...+....+.+|+.+.|.|.+.+.|.|.+.|++++..+.... + ..|.|.++..+|+|.|.|.|.|.
T Consensus 4 ~~i~~~p~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~--------~---~~L~i~~v~~~d~G~Y~C~a~n~ 72 (91)
T 3bfo_A 4 LQICVEPTSQKLMPGSTLVLQCVAVGSPIPHYQWFKNELPLTHET--------K---KLYMVPYVDLEHQGTYWCHVYND 72 (91)
T ss_dssp CEEEECCCCEEECTTSCEEEECEEECSSCCEEEEEETTEECTTCC--------S---SEEEESSCCGGGCEEEEEEEECS
T ss_pred eEEEECCCccEecCCCcEEEEEEeccCCCCEEEEEcCCeeCCcCC--------C---CeEEECCCCHHhCEEEEEEEEcC
Confidence 555666777778999999999999999999999999998876531 1 68999999999999999999999
Q ss_pred cccceecceEEEEec
Q psy2441 193 VGTEYSPSTMLYVKG 207 (212)
Q Consensus 193 ~g~~~~~~~~l~v~~ 207 (212)
.|...+..+.|.|.+
T Consensus 73 ~g~~~s~~~~l~V~~ 87 (91)
T 3bfo_A 73 RDSQDSKKVEIIIDE 87 (91)
T ss_dssp SCEEECCCEEEEEC-
T ss_pred CCCEEeeeEEEEEeh
Confidence 997765447777654
No 227
>2gki_A Nuclease; anti-DNA antibody, catalytic antibody, immune system; 2.88A {Mus musculus}
Probab=99.67 E-value=1e-15 Score=111.17 Aligned_cols=173 Identities=16% Similarity=0.226 Sum_probs=104.7
Q ss_pred CCCccEEeeCCeEEEEcccCCCC--CCcEEEEeCC--EE---ec------------CCCCCeeEEe-------------e
Q psy2441 35 APSTKVVEISHTTVLHCSASGNP--PPKISWIREM--LP---VD------------TSRNPRYNLL-------------T 82 (212)
Q Consensus 35 ~~~~~~v~~g~~v~l~C~~~~~p--~~~v~W~k~g--~~---l~------------~~~~~~~~~~-------------~ 82 (212)
.|....+.+|++++|.|.+.+.+ .+.+.|||+. .. +. .....|+.+. .
T Consensus 28 ~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~ 107 (291)
T 2gki_A 28 QSGPELVKPGASVKMSCKASGYTFTSYVMHWVKQKPGQGLEWIGYINPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSS 107 (291)
T ss_dssp ECCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECGGGBTTBCEEEEGGGTEEEEEECS
T ss_pred cCCcEEecCCCCEEEEEeccCCcccccEEEEEEECCCCCcEEEEEEecCCCccccCcccCCCEEEEEeCCCCEEEEEECc
Confidence 35578899999999999998766 5789999952 11 10 0001333322 1
Q ss_pred c--CCCCeEEEeeeCCc-----------cceeEEeec-------CCCC--CCCccccCCcceeEecCCcEEEEEeeeeCC
Q psy2441 83 S--GAPGTYIKIKPNLF-----------SPLSVYSAD-------KIPP--GFPQITEAPSTKVVEISHTTVLHCSASGNP 140 (212)
Q Consensus 83 ~--~~~g~~l~i~~~~~-----------~~~~v~~~~-------~~~~--~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p 140 (212)
. +|.|.|.|...... ..+.|.... ..++ ..+.+...+....+.+|+.+.|.|.+.+.+
T Consensus 108 v~~~DsG~Y~C~~~~~~~g~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~v~~~p~~~~v~~G~~v~L~C~~~~~~ 187 (291)
T 2gki_A 108 LTSEDSAVYYCARGAYKRGYAMDYWGQGTSVTVSSRGGGGSGGGGSGGGGSDLVMSQSPSSLAVSAGEKVTMSCKSSQSL 187 (291)
T ss_dssp CCGGGCEEEEEEEECGGGTTCEEEECCCEEEEECC----------------CCCEECSCSEEEEETTSCEEEEEEESSCC
T ss_pred CCHHHCEEEEEEEeccccccccceeCCCcEEEEecCCccccccccCCCCCccceEEcCCCEEEEcCCCcEEEEEEcCCcc
Confidence 1 37888888776532 122222100 0000 123344455567789999999999998887
Q ss_pred CC------ceEEEeCC--EEec----C------CCCCceEEcCCCCceeEEEcCCCCCCCeeEEEEEEcccccceecceE
Q psy2441 141 PP------KISWIREM--LPVD----T------SRNPRYNLLTSGAPGALQITNSIEEDQGKYECVAENEVGTEYSPSTM 202 (212)
Q Consensus 141 ~~------~i~W~~~~--~~~~----~------~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~n~~g~~~~~~~~ 202 (212)
.+ .+.|+++. .... . ....++....+....+|.|.++..+|+|.|.|.|.|...-.......
T Consensus 188 ~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~~~~~~~fg~gt~ 267 (291)
T 2gki_A 188 FNSRTRKNYLAWYQQKPGQSPKLLIYWASTRESGVPDRFTGSGSGTDFTLTISSVQAEDLAVYYCKQSYYHMYTFGSGTK 267 (291)
T ss_dssp EETTTTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEEEETTEEEECCCEE
T ss_pred ccccccceeEEEEEECCCCCcEEEEEEcccCCCCcCCCEEEEecCCEEEEEECCCCHHHCEEEEEEEccCCceEEcCCEE
Confidence 65 89999953 2111 0 01234444333334689999999999999999999854322222245
Q ss_pred EEEec
Q psy2441 203 LYVKG 207 (212)
Q Consensus 203 l~v~~ 207 (212)
|.|+.
T Consensus 268 l~v~~ 272 (291)
T 2gki_A 268 LEIKH 272 (291)
T ss_dssp EEEEC
T ss_pred EEEEe
Confidence 55544
No 228
>2lu7_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=99.67 E-value=8.9e-16 Score=90.32 Aligned_cols=81 Identities=20% Similarity=0.293 Sum_probs=65.4
Q ss_pred cceeEecCCcEEEEEeeeeCCCCceEEEeCCEEecCCCCCceEEcCCCCceeEEEcCCCCCCCeeEEEEEEcccccceec
Q psy2441 120 STKVVEISHTTVLHCSASGNPPPKISWIREMLPVDTSRNPRYNLLTSGAPGALQITNSIEEDQGKYECVAENEVGTEYSP 199 (212)
Q Consensus 120 ~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~n~~g~~~~~ 199 (212)
....+.+|+.+.|.|.+.+ |.|.+.|++++..+... .++....++....|.|.++..+|+|.|.|.|.| ....
T Consensus 4 t~v~~~~G~~v~l~C~vs~-p~p~v~W~k~g~~l~~~--~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n----~~~~ 76 (84)
T 2lu7_A 4 TRVRSTPGGDLELVVHLSG-PGGPVRWYKDGERLASQ--GRVQLEQAGARQVLRVQGARSGDAGEYLCDAPQ----DSRI 76 (84)
T ss_dssp CCEEECTTSCEEEECCCSC-CSTTCEEEETTEECCCC--SSEEEEECSSCEEEEESSCSSTTCEEEEEECTT----TCEE
T ss_pred eEEEEecCCCEEEEEEECC-CCcEEEEEECCEEcccc--ccEEEeecCCeEEEEecCCCCcccEEEEEEECC----EEEE
Confidence 3466888999999999966 88899999999999875 566666666567899999999999999999855 3444
Q ss_pred ceEEEEecc
Q psy2441 200 STMLYVKGT 208 (212)
Q Consensus 200 ~~~l~v~~~ 208 (212)
+.|.|+++
T Consensus 77 -a~l~V~eP 84 (84)
T 2lu7_A 77 -FLVSVEEP 84 (84)
T ss_dssp -EEEEECCC
T ss_pred -EEEEEECC
Confidence 77777653
No 229
>3eow_R Poliovirus receptor; immunoglobulin super family, alternative splicing, cell adhesion, cell membrane, glycoprotein, HOST-virus interaction; 3.50A {Homo sapiens} PDB: 3uro_R 3epc_R* 3epd_R* 3epf_R*
Probab=99.66 E-value=7.1e-16 Score=107.48 Aligned_cols=166 Identities=18% Similarity=0.236 Sum_probs=97.3
Q ss_pred CCccEEeeCCeEEEEcccCC-CCCCc----EEEEeCCEEecCC-----------CCCeeE----------------Eeec
Q psy2441 36 PSTKVVEISHTTVLHCSASG-NPPPK----ISWIREMLPVDTS-----------RNPRYN----------------LLTS 83 (212)
Q Consensus 36 ~~~~~v~~g~~v~l~C~~~~-~p~~~----v~W~k~g~~l~~~-----------~~~~~~----------------~~~~ 83 (212)
|..+.+.+|+++.|.|.+.+ .+.+. +.|+|++...... ...|+. +...
T Consensus 6 p~~v~~~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~sL~I~~v 85 (221)
T 3eow_R 6 PTQVPGFLGDSVTLPCYLQVPNMEVTHVSQLTWARHGESGSMAVFHQTQGPSYSESKRLEFVAARLGAELRDASLRMFGL 85 (221)
T ss_dssp CCCCCCCCSSCCEEECCCCCCSSSCCCEEEEEECBSSSCSSCCCEEESSSEEECSCSSCEEESSCSSCCCCCCEEECCCS
T ss_pred CCcEEEEeCCCEEEEeeeccCCCCCccceEEEEEeCCCCceEEEEECCCCCCcCCCCcEEEecccCCCCCCCceEEEccC
Confidence 45667889999999999944 44444 9999986421100 012222 2222
Q ss_pred --CCCCeEEEeeeCCc-cceeEEeecCCCCCCCccccCCcceeEecCCcE-EEEEeee-eCCCCceEEEeCCEEecCCCC
Q psy2441 84 --GAPGTYIKIKPNLF-SPLSVYSADKIPPGFPQITEAPSTKVVEISHTT-VLHCSAS-GNPPPKISWIREMLPVDTSRN 158 (212)
Q Consensus 84 --~~~g~~l~i~~~~~-~~~~v~~~~~~~~~~p~~~~~~~~~~~~~g~~~-~l~C~~~-~~p~~~i~W~~~~~~~~~~~~ 158 (212)
.|.|.|.|...... ..........+ ..+|.+...+.... ..|+.+ .|.|.+. +.|.|.+.|++++......
T Consensus 86 ~~~D~G~Y~C~~~~~~~~~~~~~~~L~V-~~~P~~~~~~~~~~-~~g~~~~~l~C~~~~g~P~p~v~W~k~~~~~~~~-- 161 (221)
T 3eow_R 86 RVEDEGSYTCLFVTFPQGSRSVDIWLRV-LAKPQNTAEVQKVQ-LTGEPVPMARCVSTGGRPPAQITWHSDLGGMPQT-- 161 (221)
T ss_dssp SCCCCSCBEEEEEESSSCSCEEECCCCC-CCCCEEEEEEECCC-CCSSSCCEEEEEEESCSSCCCEEEECSSSCCCCC--
T ss_pred ChHHCeEEEEEEEeCCCCceEEEEEEEE-EECCCceeecCCcc-cCCceEEEEEEECCCccCCCeeEEEeCCCCCCcc--
Confidence 47888888765422 11111111111 11354443322222 568888 5999987 8999999999864333221
Q ss_pred CceEEcCCC---CceeEEEcCCCCCCCeeEEEEEEcccccceecceEEEEecc
Q psy2441 159 PRYNLLTSG---APGALQITNSIEEDQGKYECVAENEVGTEYSPSTMLYVKGT 208 (212)
Q Consensus 159 ~~~~~~~~~---~~~~l~i~~~~~~d~g~y~C~a~n~~g~~~~~~~~l~v~~~ 208 (212)
.......++ ..+.|.|.++..+|.|.|+|.|.|..+... ..+.|...
T Consensus 162 ~~~~~~~~~~~~~~s~L~i~~~~~~d~g~ytC~a~n~~~~~~---~~~~v~~~ 211 (221)
T 3eow_R 162 SQVPGFLSGTVTVTSLWILVPSSQVDGKQVTCKVEHESFEKP---QLLTVSLT 211 (221)
T ss_dssp EEECCCCBTTBCCEEEEECCCCSCCCCCCEEEEECCSCSSSC---EEEEECCC
T ss_pred ceeecCCCCcEEEEEEEEEeCCHHHCCCeEEEEEECCCCCCC---eEEEEEEE
Confidence 010000111 136799999999999999999999887654 45555443
No 230
>2wqr_A IG epsilon chain C region; immune system, immunoglobulin domain, glycoprotein; HET: NAG BMA MAN PG4; 1.90A {Homo sapiens} PDB: 2y7q_B* 1o0v_A* 3h9y_A* 3h9z_A* 3ha0_A* 1fp5_A 1f6a_B 1g84_A
Probab=99.66 E-value=1.9e-16 Score=116.66 Aligned_cols=166 Identities=17% Similarity=0.184 Sum_probs=99.0
Q ss_pred CCCeEEeCCCccEEeeC--CeEEEEcccCCC-C-CCcEEEEeCCEEecCCC--------CCeeEE------eec--CCCC
Q psy2441 28 GFPQITEAPSTKVVEIS--HTTVLHCSASGN-P-PPKISWIREMLPVDTSR--------NPRYNL------LTS--GAPG 87 (212)
Q Consensus 28 ~~p~~~~~~~~~~v~~g--~~v~l~C~~~~~-p-~~~v~W~k~g~~l~~~~--------~~~~~~------~~~--~~~g 87 (212)
.+|.+.+.+.......| +.+.|.|.+.+. | .+.|+|+|+|.++.... ...+.+ ... +|.|
T Consensus 6 ~~P~v~~~~~~~~~~~~~~~~v~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~g 85 (323)
T 2wqr_A 6 TPPTVKILQSSCDGGGHFPPTIQLLCLVSGYTPGTIQITWLEDGQVMDVDLSTASTTQEGELASTQSELTLSQKHWLSDR 85 (323)
T ss_dssp CCCCCEEEEECCCTTSCCCSEEEEEEEEEEECCCCEEEEEEETTEECCGGGEEEEEEEETTEEEEEEEEEEEHHHHHTTC
T ss_pred CCCEEEEeCCChHHhccCCCcEEEEEEEeCeECCCeEEEEEECCEEcccceecCCcCccCCcEEEEEEEEEcHHHcCCCC
Confidence 45666544333222334 699999999875 4 46899999998876431 122211 111 2678
Q ss_pred eEEEeeeCCccceeEEee--cCCCCCCCcc-ccCCcceeEecCCcEEEEEeeeeC-CCC---ceEEEeCC-EEecCCCCC
Q psy2441 88 TYIKIKPNLFSPLSVYSA--DKIPPGFPQI-TEAPSTKVVEISHTTVLHCSASGN-PPP---KISWIREM-LPVDTSRNP 159 (212)
Q Consensus 88 ~~l~i~~~~~~~~~v~~~--~~~~~~~p~~-~~~~~~~~~~~g~~~~l~C~~~~~-p~~---~i~W~~~~-~~~~~~~~~ 159 (212)
.|.|.............. .......|.+ ...+....+.+|+.+.|.|.+.+. |.+ .|.|++++ ..+... .
T Consensus 86 ~Y~C~a~n~~~~~~~~~~~~~~~~~~~p~v~~~~p~~~~v~~G~~v~L~C~~~g~~P~p~~~~i~W~k~~g~~~~~~--~ 163 (323)
T 2wqr_A 86 TYTCQVTYQGHTFEDSTKKCADSNPRGVSAYLSRPSPFDLFIRKSPTITCLVVDLAPSKGTVQLTWSRASGKPVNHS--T 163 (323)
T ss_dssp CEEEEEEETTEEEEEEECCCCCSSGGGCEEEECCCCHHHHHTSSCCEEEEEEEEECCCSSCCEEEEEETTCCCCCCC--C
T ss_pred cEEEEEEeCCCCcceeeecCCCCCCCCCEEEEcCCCHHHhccCCeEEEEEEEeccCCCCCceEEEEEECCCcccccc--c
Confidence 899988764332221111 0111111322 333444457789999999999885 556 89999975 333221 1
Q ss_pred ceEE-cCCC---CceeEEEcCCCCCCCeeEEEEEEccccc
Q psy2441 160 RYNL-LTSG---APGALQITNSIEEDQGKYECVAENEVGT 195 (212)
Q Consensus 160 ~~~~-~~~~---~~~~l~i~~~~~~d~g~y~C~a~n~~g~ 195 (212)
.... ..++ ..+.|.|.++..+|.|.|.|.|.|..+.
T Consensus 164 ~~~~~~~~g~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~~~ 203 (323)
T 2wqr_A 164 RKEEKQRNGTLTVTSTLPVGTRDWIEGETYQCRVTHPHLP 203 (323)
T ss_dssp CEEEECTTSCEEEEEEEECCHHHHHTTCCEEEEEECTTSS
T ss_pred CCCccCCCCCEEEEEEEEECHHHccCCCCEEEEEECCCCC
Confidence 1111 1111 1257999999999999999999997643
No 231
>1gxe_A Myosin binding protein C, cardiac-type; cytoskeleton, muscle, IGI, thick filament, immunoglobulin domain; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.66 E-value=2.7e-16 Score=101.37 Aligned_cols=86 Identities=23% Similarity=0.388 Sum_probs=68.0
Q ss_pred CcceeEecCCcEEEEEeeeeCCCCceEEEeCC----------------------------EEecCCCCCceEEcCCCCce
Q psy2441 119 PSTKVVEISHTTVLHCSASGNPPPKISWIREM----------------------------LPVDTSRNPRYNLLTSGAPG 170 (212)
Q Consensus 119 ~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~----------------------------~~~~~~~~~~~~~~~~~~~~ 170 (212)
+....+.+|+.+.|.|.+.|.|.|.+.|++++ ..+... ..++....++...
T Consensus 25 p~~~~v~~G~~v~L~C~~~G~P~P~i~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~r~~i~~~~~~s 103 (139)
T 1gxe_A 25 PDTIVVVAGNKLRLDVPISGDPAPTVIWQKAITQGNKAPARPAPDAPEDTGDSDEWVFDKKLLCET-EGRVRVETTKDRS 103 (139)
T ss_dssp CCEEEESSSSCCCCEEECCSBSCCEEEEEEECCCSCSSCCCCCCCCCCCCCCSSCCCCSCCCCCSC-SSSCEEEEETTEE
T ss_pred CCCEEEeCCCeEEEEEEEEEcCCCeEEEEECCcccccccccccccccccccccccccccceeecCC-CCeEEEEeCCCEE
Confidence 45678999999999999999999999999988 332111 2444444443346
Q ss_pred eEEEcCCCCCCCeeEEEEEEcccccceecceEEEEe
Q psy2441 171 ALQITNSIEEDQGKYECVAENEVGTEYSPSTMLYVK 206 (212)
Q Consensus 171 ~l~i~~~~~~d~g~y~C~a~n~~g~~~~~~~~l~v~ 206 (212)
.|.|.++..+|+|.|.|.|.|..|..... +.|.|.
T Consensus 104 ~L~I~~v~~~DsG~Y~C~A~N~~G~~~~~-~~L~V~ 138 (139)
T 1gxe_A 104 IFTVEGAEKEDEGVYTVTVKNPVGEDQVN-LTVKVI 138 (139)
T ss_dssp EEECSCCCTTTCEEEEEEEECSSCEEEEE-EEEEEC
T ss_pred EEEECCCCcccCEEEEEEEEeCCceEEEE-EEEEEE
Confidence 89999999999999999999999988766 777664
No 232
>4ei6_B Vbeta16 XV19 type II natural killer T cell recept variable domain, human constant...; natural killer T cell receptor, immune system; 1.60A {Mus musculus} PDB: 4ei5_D 4elk_B 4elm_F* 2esv_E 3ffc_E 3utt_E 3utp_E* 3uts_E 3qjf_B 3qjh_B 3qiw_D* 3qiu_D
Probab=99.65 E-value=3.8e-15 Score=105.38 Aligned_cols=162 Identities=15% Similarity=0.269 Sum_probs=98.4
Q ss_pred CeEEeCCCccEEeeCCeEEEEcccCCCCCCcEEEEe--------------CCEEecCC-CC-CeeEEe------------
Q psy2441 30 PQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIR--------------EMLPVDTS-RN-PRYNLL------------ 81 (212)
Q Consensus 30 p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~k--------------~g~~l~~~-~~-~~~~~~------------ 81 (212)
+.+...|..+.+.+|++++|.| ..+.+.+.+.||| ++..+... .. .|+.+.
T Consensus 3 ~~v~~~p~~v~v~~G~~v~L~C-~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~ 81 (245)
T 4ei6_B 3 PKVLQIPSHQIIDMGQMVTLNC-DPVSNHLYFYWYKQILGQQMEFLVNFYNGKVMEKSKLFKDQFSVERPDGSYFTLKIQ 81 (245)
T ss_dssp CCCEEECSEEEEETTCCEEEEE-ECCTTCCEEEEEEEETTTEEEEEEEEETTEEEEECTTCCTTEEEECCTTSCEEEEEC
T ss_pred cceEeCCceEEecCCCCEEEEE-EcCCCCCEEEEEEECCCCCcEEEEEECCCceeccCCCccCCEEEEeccCceEEEEEC
Confidence 4556677888999999999999 6567888999999 22211111 01 333332
Q ss_pred ec--CCCCeEEEeeeC----------CccceeEEeecCCCCCCCccc-cCCcceeEecCCcEEEEEeeee-CCCC-ceEE
Q psy2441 82 TS--GAPGTYIKIKPN----------LFSPLSVYSADKIPPGFPQIT-EAPSTKVVEISHTTVLHCSASG-NPPP-KISW 146 (212)
Q Consensus 82 ~~--~~~g~~l~i~~~----------~~~~~~v~~~~~~~~~~p~~~-~~~~~~~~~~g~~~~l~C~~~~-~p~~-~i~W 146 (212)
.. .|.|.|.|.... ....+.|..... ...+|.+. ..+....+.+|+.+.|.|.+.+ .|.+ .+.|
T Consensus 82 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~-~~~~p~~~~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W 160 (245)
T 4ei6_B 82 PTALEDSAVYFCASSFWGAYAEQFFGPGTRLTVLEDLK-NVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSW 160 (245)
T ss_dssp SCCGGGCEEEEEEEECSSTTCCCEECCCEEEEEESCGG-GCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEEEEE
T ss_pred CCCHhHCEEEEEEEccCCCcceEEEcCCcEEEEecccC-CCCCceEEEeCCCcccccCCCceEEEEEEeeEeCCCeEEEE
Confidence 22 377888887663 222333332100 01123333 2333334556999999999988 4545 8999
Q ss_pred EeCCEEecCCCCCceEEc--------CCCC---ceeEEEcCCCCCC-CeeEEEEEEccccc
Q psy2441 147 IREMLPVDTSRNPRYNLL--------TSGA---PGALQITNSIEED-QGKYECVAENEVGT 195 (212)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~--------~~~~---~~~l~i~~~~~~d-~g~y~C~a~n~~g~ 195 (212)
++++..+... .+.... .++. ...|.|.....+| .|.|+|.|.|....
T Consensus 161 ~~~g~~l~~~--~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~~g~ytC~v~~~~l~ 219 (245)
T 4ei6_B 161 WVNGKEVHSG--VCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGLS 219 (245)
T ss_dssp EETTEEECTT--EEECSSCEESSTTSTTCCEEEEEEEEEEHHHHSCTTCEEEEEEEECCBC
T ss_pred EECCEECCCC--cccccccccccccCCCCCEEEEEEEEEcHHHhccCCCeEEEEEEECCCC
Confidence 9999988653 111000 1111 1457888877778 89999999987543
No 233
>3nfj_J T cell receptor beta chain; immunoglobulin family, immune system; 2.68A {Homo sapiens} PDB: 3hg1_E
Probab=99.65 E-value=1.4e-15 Score=107.70 Aligned_cols=163 Identities=18% Similarity=0.261 Sum_probs=98.7
Q ss_pred eEEeCCCccEEeeCCeEEEEcccCCCCCCcEEEEeC--CEE---e---------cCCCCCeeEEe------------ec-
Q psy2441 31 QITEAPSTKVVEISHTTVLHCSASGNPPPKISWIRE--MLP---V---------DTSRNPRYNLL------------TS- 83 (212)
Q Consensus 31 ~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~k~--g~~---l---------~~~~~~~~~~~------------~~- 83 (212)
.+...|..+.+.+|+.+.|.|.+.+.+.+.+.|||. +.. + ......|+.+. ..
T Consensus 3 ~v~~~p~~v~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~I~~v~ 82 (245)
T 3nfj_J 3 TIHQWPATLVQPVGSPLSLECTVEGTSNPNLYWYRQAAGRGLQLLFYSVGIGQISSEVPQNLSASRPQDRQFILSSKKLL 82 (245)
T ss_dssp EEEEECSEEEEETTCCEEEEEEEESCSSCEEEEEEESTTSCEEEEEEESSTTCCBCSSCCSSEEEEEETTEEEEEESSCC
T ss_pred eeeCCCceEEecCCCCEEEEEEecCCCCceEEEEEECCCCCcEEEEEECCCcccCCccCCcEEEEecCCCEEEEEECCCC
Confidence 355677788999999999999999888899999992 110 0 00111333332 21
Q ss_pred -CCCCeEEEeeeC------------CccceeEEeecCCCCCCCcccc-CCcceeEecCCcEEEEEeeeeC-CCC-ceEEE
Q psy2441 84 -GAPGTYIKIKPN------------LFSPLSVYSADKIPPGFPQITE-APSTKVVEISHTTVLHCSASGN-PPP-KISWI 147 (212)
Q Consensus 84 -~~~g~~l~i~~~------------~~~~~~v~~~~~~~~~~p~~~~-~~~~~~~~~g~~~~l~C~~~~~-p~~-~i~W~ 147 (212)
.|.|.|.|.... ....+.|..... ...+|.+.. .+....+..|+.+.|.|.+.+. |.+ .+.|+
T Consensus 83 ~~D~G~Y~C~~~~~~g~~~~~~~~~~~~~l~V~~~~~-~~~~P~v~~~~~~~~~~~~g~~~~l~C~~~g~~p~~~~v~W~ 161 (245)
T 3nfj_J 83 LSDSGFYLCAWSVSVGAGVPTIYFGEGSWLTVVEDLN-KVFPPEVAVFEPSEAEISHTQKATLVCLATGFFPDHVELSWW 161 (245)
T ss_dssp GGGCEEEEEEEECCTTTSSCCCEECCCEEEEEESCGG-GCBCCEEEEEECCHHHHHHHSEEEEEEEEEEEBSSCEEEEEE
T ss_pred hhhCEEEEEEEeeccCCCceeEEECCCeEEEEEcccC-CCCCCceEeecCCcccccCCCceEEEEEEccCcCCCEEEEEE
Confidence 378888887655 112333332100 111233332 2222334458999999999884 444 78999
Q ss_pred eCCEEecCCCCCceEEc--------CCCC---ceeEEEcCCCCCC-CeeEEEEEEcccccc
Q psy2441 148 REMLPVDTSRNPRYNLL--------TSGA---PGALQITNSIEED-QGKYECVAENEVGTE 196 (212)
Q Consensus 148 ~~~~~~~~~~~~~~~~~--------~~~~---~~~l~i~~~~~~d-~g~y~C~a~n~~g~~ 196 (212)
+++..+... ...... .++. ...|.|......| .|.|+|.|.|.....
T Consensus 162 k~g~~l~~~--~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~~YtC~v~~~~~~~ 220 (245)
T 3nfj_J 162 VNGKEVHSG--VCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGLSE 220 (245)
T ss_dssp ETTEEECTT--EEECSSCEESSSSSTTCCEEEEEEEEEEHHHHTCTTCEEEEEEEECCBCS
T ss_pred ECCEECCCC--cccccccccccccCCCCCEEEEEEEEECHHHhccCCCeEEEEEEECCCCC
Confidence 999988653 110000 1111 2467787777777 679999999876543
No 234
>1i1c_A IGG2A, IG gamma-2A chain C region; FC, immune system; HET: NAG FUL BMA MAN FUC; 2.70A {Rattus norvegicus} SCOP: b.1.1.2 b.1.1.2 PDB: 1i1a_D*
Probab=99.65 E-value=5.3e-16 Score=109.52 Aligned_cols=166 Identities=18% Similarity=0.247 Sum_probs=96.2
Q ss_pred CCeEE-eCCCccE-EeeCCeEEEEcccCCC---CCC-cEEEEeCCEEecCC--------CCCee------EEeec--CCC
Q psy2441 29 FPQIT-EAPSTKV-VEISHTTVLHCSASGN---PPP-KISWIREMLPVDTS--------RNPRY------NLLTS--GAP 86 (212)
Q Consensus 29 ~p~~~-~~~~~~~-v~~g~~v~l~C~~~~~---p~~-~v~W~k~g~~l~~~--------~~~~~------~~~~~--~~~ 86 (212)
+|.+. ..+.... +.+|++++|.|.+.+. |.+ .|.|||++..+... ...++ .+... +|.
T Consensus 15 ~P~v~~~pp~~~~~v~~G~~v~L~C~~~g~~~~P~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~s~L~I~~~~~~D~ 94 (239)
T 1i1c_A 15 VSSVFIFPPKTKDVLGGGLTPKVTCVVVDISQNDPEVRFSWFIDDVEVHTAQTHAPEKQSNSTLRSVSELPIVERDWLNG 94 (239)
T ss_dssp --CEEEECCCHHHHTTSSSCCEEEEEEEEECTTCCCCEEEEEESSCEECCCEECCCEECTTSCEEEEEEEECCHHHHHTT
T ss_pred CCEEEEECCChHHhcccCCcEEEEEEEecCccCCCCCEEEEEECCccccCcccccceEcCCCcEEEEEEEEEEhhHccCC
Confidence 34443 4444444 7899999999999775 766 89999998665421 01112 22111 378
Q ss_pred CeEEEeeeCCccc--e--eEEeecCCCCCCCccccCCcceeEecCCcEEEEEeeee-CCC-CceEEEeCCEEecCCCCCc
Q psy2441 87 GTYIKIKPNLFSP--L--SVYSADKIPPGFPQITEAPSTKVVEISHTTVLHCSASG-NPP-PKISWIREMLPVDTSRNPR 160 (212)
Q Consensus 87 g~~l~i~~~~~~~--~--~v~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~-~p~-~~i~W~~~~~~~~~~~~~~ 160 (212)
|.|.|........ . .+... .....+|.+...+.......|+.+.|.|.+.+ .|. ..+.|+++|..+......+
T Consensus 95 g~Y~C~~~~~~~~~~~~~~v~~~-~~~~~~P~v~v~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~ 173 (239)
T 1i1c_A 95 KTFKCKVNSGAFPAPIEKSISKP-EGTPRGPQVYTMAPPKEEMTQSQVSITCMVKGFYPPDIYTEWKMNGQPQENYKNTP 173 (239)
T ss_dssp CCEEEEEECSSSSSCEEEEECCC-SSCCBCCEEEEECCCGGGGGSSEEEEEEEEEEEBSSCCEEEEEETTEECSSEEECC
T ss_pred CeEEEEEecccCCCCcEEEEecC-CCCCcCCEEEEECCChHHhcCCcEEEEEEEeeeECCCeEEEEEECCEECCCceecC
Confidence 8999988774332 1 22110 01122355544333322234789999999988 454 4899999998875421111
Q ss_pred eEEcCCCC---ceeEEEcCCCCCCCeeEEEEEEccccc
Q psy2441 161 YNLLTSGA---PGALQITNSIEEDQGKYECVAENEVGT 195 (212)
Q Consensus 161 ~~~~~~~~---~~~l~i~~~~~~d~g~y~C~a~n~~g~ 195 (212)
.....++. .+.|.+.....+|.|.|+|.|.|....
T Consensus 174 ~~~~~dgt~~~~s~l~v~~~~~~~~g~YtC~v~n~~l~ 211 (239)
T 1i1c_A 174 PTMDTDGSYFLYSKLNVKKETWQQGNTFTCSVLHEGLE 211 (239)
T ss_dssp CEECTTSCEEEEEEEEEEHHHHHTTCCEEEEEECTTSG
T ss_pred ceECCCCCEEEEEEEEEChhhcCCCCEEEEEEECCCCC
Confidence 11122221 123455544455799999999997543
No 235
>3cx2_A Myosin-binding protein C, cardiac-type; protonation states, actin-binding, cardiomyopathy, cell adhesion, disease mutation, immunoglobulin domain; 1.30A {Homo sapiens} PDB: 2v6h_A 2avg_A
Probab=99.65 E-value=3.6e-15 Score=92.22 Aligned_cols=93 Identities=17% Similarity=0.200 Sum_probs=70.5
Q ss_pred CccccCCcceeEecCCcEEEEEeeeeCCC---CceEEEeCCEEecCC-CCCceEEcC------CCCceeEEEcCCCCCCC
Q psy2441 113 PQITEAPSTKVVEISHTTVLHCSASGNPP---PKISWIREMLPVDTS-RNPRYNLLT------SGAPGALQITNSIEEDQ 182 (212)
Q Consensus 113 p~~~~~~~~~~~~~g~~~~l~C~~~~~p~---~~i~W~~~~~~~~~~-~~~~~~~~~------~~~~~~l~i~~~~~~d~ 182 (212)
|.|...+....+.+|+.+.|.|.+.+.|. |.+.|++++...... ...++.... ......|.|.+++.+|+
T Consensus 5 p~f~~~p~~~~v~~G~~v~L~C~~~g~p~~~~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~ 84 (108)
T 3cx2_A 5 GLFVMRPQDGEVTVGGSITFSARVAGASLLKPPVVKWFKGKWVDLSSKVGQHLQLHDSYDRASKVYLFELHITDAQPAFT 84 (108)
T ss_dssp CSCSBCCCCEEEETTCCEEEEEEEECC-CCSCCEEEEEETTTEEGGGGCBTTEEEEEEEETTTTEEEEEEEECSCCGGGC
T ss_pred cEEEeCCCcEEEeCCCCEEEEEEECCCccCCCcEEEEccCCcccccccCCceEEEeeEEecccccceEEEEEecCCCccC
Confidence 67777888888999999999999999998 999999987322111 112332210 01136899999999999
Q ss_pred eeEEEEEEcccccceecceEEEEe
Q psy2441 183 GKYECVAENEVGTEYSPSTMLYVK 206 (212)
Q Consensus 183 g~y~C~a~n~~g~~~~~~~~l~v~ 206 (212)
|.|.|.|.|..|..... +.|.|.
T Consensus 85 G~Y~C~a~N~~G~~~~~-~~L~V~ 107 (108)
T 3cx2_A 85 GSYRCEVSTKDKFDCSN-FNLTVH 107 (108)
T ss_dssp EEEEEEEECSSCEEEEE-EEEEEE
T ss_pred EEEEEEEecCCCceEEE-EEEEEe
Confidence 99999999999998777 888775
No 236
>1hnf_A CD2; T lymphocyte adhesion glycoprotein; HET: NAG; 2.50A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1cdb_A 1gya_A* 1qa9_A
Probab=99.64 E-value=2.2e-15 Score=101.89 Aligned_cols=142 Identities=15% Similarity=0.190 Sum_probs=90.3
Q ss_pred CCccEEeeCCeEEEEcccC--CCCCCcEEEEe--CCEEecC--------CCCCeeEEee--------c--CCCCeEEEee
Q psy2441 36 PSTKVVEISHTTVLHCSAS--GNPPPKISWIR--EMLPVDT--------SRNPRYNLLT--------S--GAPGTYIKIK 93 (212)
Q Consensus 36 ~~~~~v~~g~~v~l~C~~~--~~p~~~v~W~k--~g~~l~~--------~~~~~~~~~~--------~--~~~g~~l~i~ 93 (212)
+..+...+|++|+|.|... +.+.+.|.|+| ++..|.. ....|+.+.. . .|.|.|.|..
T Consensus 6 ~~~v~g~~G~sv~L~~~~~~~~~~~~~i~W~k~~~~~~i~~~~~~~~~~~~~~R~~~~~ngsL~I~~v~~~DsG~Y~c~~ 85 (182)
T 1hnf_A 6 ALETWGALGQDINLDIPSFQMSDDIDDIKWEKTSDKKKIAQFRKEKETFKEKDTYKLFKNGTLKIKHLKTDDQDIYKVSI 85 (182)
T ss_dssp CEEEEEETTSCEEECCTTCCCCSSEEEEEEEEGGGCCEEEEECGGGCEEESCTTEEECTTSCEEECSCCGGGCEEEEEEE
T ss_pred ccEEEEecCCCEEEeCCcccccCcCCEEEEEECCCCcEEEEEeCccCCCCCCCeEEECCCCCEEECCCChhhCEEEEEEE
Confidence 3456778899999999653 34567899999 8876621 0113444332 2 3777887765
Q ss_pred eCCc--------cceeEEeecCCCCCCCccccCCcceeEecCCcEEEEEeeeeCCCCceEEEeCCEEecCCCCCceEEcC
Q psy2441 94 PNLF--------SPLSVYSADKIPPGFPQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREMLPVDTSRNPRYNLLT 165 (212)
Q Consensus 94 ~~~~--------~~~~v~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~ 165 (212)
.... ..+.|+. +...|.+. ..+..+.|.|.+.+.|.+.+.|++++..+...
T Consensus 86 ~n~~g~~~~~~~~~L~V~~----~~~~P~i~--------~~~~~v~L~C~~~~~p~~~~~W~~~g~~l~~~--------- 144 (182)
T 1hnf_A 86 YDTKGKNVLEKIFDLKIQE----RVSKPKIS--------WTCINTTLTCEVMNGTDPELNLYQDGKHLKLS--------- 144 (182)
T ss_dssp EETTSCEEEEEEEEEEEEC----CCCCCEEE--------EETTTTEEEEECSSCSSCEEEEEESSCEEEEE---------
T ss_pred EeCCCceeEEEEEEEEEcC----cCCCCEEE--------EccCcEEEEeEccCCCCCEEEEEECCEECCCC---------
Confidence 4421 1222221 11112222 12447899999999889999999999877210
Q ss_pred CCCceeEEEcCCCCCCCeeEEEEEEcccccceecceEE
Q psy2441 166 SGAPGALQITNSIEEDQGKYECVAENEVGTEYSPSTML 203 (212)
Q Consensus 166 ~~~~~~l~i~~~~~~d~g~y~C~a~n~~g~~~~~~~~l 203 (212)
. ..+.+.. ..+|.|.|+|.|.|..|..... ..+
T Consensus 145 ~---~~i~~~~-~~~d~G~Y~C~a~N~~~~~~s~-~~~ 177 (182)
T 1hnf_A 145 Q---RVITHKW-TTSLSAKFKCTAGNKVSKESSV-EPV 177 (182)
T ss_dssp S---SCEEEEC-CSCEEEEEEEEEECSSCEEEEE-EEE
T ss_pred C---cEEEEec-ccCCCcEEEEEEEeCCCCcEEc-cee
Confidence 1 2344332 4789999999999999988766 444
No 237
>1fhg_A Telokin; immunoglobulin fold, beta barrel, contractIle protein; 2.00A {Meleagris gallopavo} SCOP: b.1.1.4 PDB: 1tlk_A
Probab=99.64 E-value=2.6e-15 Score=98.91 Aligned_cols=94 Identities=23% Similarity=0.426 Sum_probs=77.7
Q ss_pred CccccCCcceeEecCCcEEEEEeeeeCCCCceEEEeCCEEecCCCCCceEEcCC-CCceeEEEcCCCCCCCeeEEEEEEc
Q psy2441 113 PQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREMLPVDTSRNPRYNLLTS-GAPGALQITNSIEEDQGKYECVAEN 191 (212)
Q Consensus 113 p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~-~~~~~l~i~~~~~~d~g~y~C~a~n 191 (212)
|.+...+....+..|+.+.|.|.+.+.|.|.+.|++++..+... .++....+ .+...|.|.++...|.|.|.|.|.|
T Consensus 42 P~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~v~W~k~g~~~~~~--~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N 119 (154)
T 1fhg_A 42 PYFTKTILDMEVVEGSAARFDCKVEGYPDPEVMWFKDDNPVKES--RHFQIDYDEEGNCSLTISEVCGDDDAKYTCKAVN 119 (154)
T ss_dssp EEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCS--SSEEEEECTTCEEEEEESSCCGGGCEEEEEEEEE
T ss_pred CeEEccCCcEEEeCCCeEEEEEEEEEecCCEEEEEECCEECCCC--CcEEEEECCCCeEEEEECCCChhcCEEEEEEEEE
Confidence 67777777788999999999999999999999999999988764 44444322 2236899999999999999999999
Q ss_pred ccccceecceEEEEecce
Q psy2441 192 EVGTEYSPSTMLYVKGTQ 209 (212)
Q Consensus 192 ~~g~~~~~~~~l~v~~~~ 209 (212)
..|..... +.|.|...+
T Consensus 120 ~~G~~~~~-~~l~V~~~p 136 (154)
T 1fhg_A 120 SLGEATCT-AELLVETMG 136 (154)
T ss_dssp TTEEEEEE-EEEEEECC-
T ss_pred CCCeEEEE-EEEEEeCcC
Confidence 99998777 888887654
No 238
>1za6_B IGG heavy chain; immunoglobulin fold, CH2-domain-deletion, immune system; 2.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2
Probab=99.64 E-value=5.1e-16 Score=115.33 Aligned_cols=157 Identities=17% Similarity=0.261 Sum_probs=96.8
Q ss_pred CCCccEEeeCCeEEEEcccCCC--CCCcEEEEeC--CEEec---------------CCCCCeeEEee-------------
Q psy2441 35 APSTKVVEISHTTVLHCSASGN--PPPKISWIRE--MLPVD---------------TSRNPRYNLLT------------- 82 (212)
Q Consensus 35 ~~~~~~v~~g~~v~l~C~~~~~--p~~~v~W~k~--g~~l~---------------~~~~~~~~~~~------------- 82 (212)
.+....+.+|+.+.|.|.+.+. +.+.|.|||+ |..+. .....|+.+..
T Consensus 6 ~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~ 85 (344)
T 1za6_B 6 QSGAEVVKPGASVKISCKASGYTFTDHAIHWVKQNPGQRLEWIGYFSPGNDDFKYNERFKGKATLTADTSASTAYVELSS 85 (344)
T ss_dssp ECCCEEECTTCCEEEEEEEESSCTTSSCEEEEEECSSSCEEEEEEEETTTTEEEECTTTBTTEEEEEETTTTEEEEEECS
T ss_pred CCCCeEEeCCCcEEEEEEcCCccccccEEEEEEECCCCCcEEEEEEecCCCceEECcccCCcEEEEEecCCCEEEEEECC
Confidence 3456789999999999999876 3578999996 33220 01124444432
Q ss_pred c--CCCCeEEEeeeCC------ccceeEEeecCCCCCCCccccCCcceeEecCCcEEEEEeeeeC-CC-CceEEEeCCEE
Q psy2441 83 S--GAPGTYIKIKPNL------FSPLSVYSADKIPPGFPQITEAPSTKVVEISHTTVLHCSASGN-PP-PKISWIREMLP 152 (212)
Q Consensus 83 ~--~~~g~~l~i~~~~------~~~~~v~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~-p~-~~i~W~~~~~~ 152 (212)
. +|.|.|.|..... ...+.|.. .++.+|.+...+....+.+|+.+.|.|.+.+. |. +.+.|++++..
T Consensus 86 v~~~D~G~Y~C~~~n~~~~~~~~~~l~V~~---~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~k~g~~ 162 (344)
T 1za6_B 86 LRSEDTAVYFCTRSLNMAYWGQGTLVTVSS---ASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALT 162 (344)
T ss_dssp CCGGGCEEEEEEETTTTCEECCCEEEEECS---SCCBCCEEEEECCSCTTTSSSEEEEEEEEEEEBSSCCCEEETTTTBC
T ss_pred CCcccCEEEEEEEecCcceecCcEEEEEec---CCCCCCeEEEccccccccCCCcEEEEEEEeeEECCCeEEEEecCCcc
Confidence 1 3777888876652 12233321 11223444432222335679999999999886 64 79999999865
Q ss_pred ecCCCCCceEEcCCCC---ceeEEEcCCCCCCCeeEEEEEEcccccc
Q psy2441 153 VDTSRNPRYNLLTSGA---PGALQITNSIEEDQGKYECVAENEVGTE 196 (212)
Q Consensus 153 ~~~~~~~~~~~~~~~~---~~~l~i~~~~~~d~g~y~C~a~n~~g~~ 196 (212)
+........ ...++. .+.|.|.++..+| |.|+|.|.|..+..
T Consensus 163 ~~~~~~~~~-~~~~~~~~~~s~L~i~~~~~~d-G~Y~C~a~n~~~~~ 207 (344)
T 1za6_B 163 SGVHTFPAV-LQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNT 207 (344)
T ss_dssp TTEEECCCE-ECTTSCEEEEEEEEEETTHHHH-BCEEEEEEEGGGTE
T ss_pred CceeECCCe-ECCCCCEEEEEEEEEcHHHcCC-CcEEEEEEeCCCCc
Confidence 321100111 111110 2478999988888 99999999988764
No 239
>3pl6_D MBP peptide / T-cell receptor beta chain chimera; TCR-MHC complex, immunoglobulin fold, immune receptor, membr immune system; HET: NAG; 2.55A {Homo sapiens}
Probab=99.64 E-value=3.3e-15 Score=107.16 Aligned_cols=163 Identities=19% Similarity=0.290 Sum_probs=97.4
Q ss_pred CCeEEeCCCccEEeeCCeEEEEcccCCCCCCcEEEEeC--CEE------------ecCC-CC-CeeEEee----------
Q psy2441 29 FPQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIRE--MLP------------VDTS-RN-PRYNLLT---------- 82 (212)
Q Consensus 29 ~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~k~--g~~------------l~~~-~~-~~~~~~~---------- 82 (212)
.+.+...+..+.+.+|++++|.|.+. .+.+.+.|||. +.. .... .. .|+.+..
T Consensus 26 ~~~v~~~p~~v~v~~G~~v~L~C~~~-~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~I 104 (268)
T 3pl6_D 26 GAGVSQTPSNKVTEKGKYVELRCDPI-SGHTALYWYRQSLGQGPEFLIYFQGTGAADDSGLPNDRFFAVRPEGSVSTLKI 104 (268)
T ss_dssp -SSCBCCCSEEEEETTCCEEEEEBCB-TTCCEEEEEEECTTSCCEEEEEEETTEEEECTTCCSTTEEEECTTSSSEEEEE
T ss_pred CceeEeCCCEEEecCCCCEEEEEEeC-CCCceEEEEEECCCCCcEEEEEECCCCccccCCCccCcEEEEecCCCEEEEEE
Confidence 45566677788999999999999986 56778999992 111 1000 01 3333332
Q ss_pred --c--CCCCeEEEeeeCC--------ccceeEEeecCCCCCCCcccc-CCcceeEecCCcEEEEEeeeeCCC-C-ceEEE
Q psy2441 83 --S--GAPGTYIKIKPNL--------FSPLSVYSADKIPPGFPQITE-APSTKVVEISHTTVLHCSASGNPP-P-KISWI 147 (212)
Q Consensus 83 --~--~~~g~~l~i~~~~--------~~~~~v~~~~~~~~~~p~~~~-~~~~~~~~~g~~~~l~C~~~~~p~-~-~i~W~ 147 (212)
. .|.|.|.|..... ...+.|..... ...+|.+.. .+....+..|+.+.|.|.+.+.++ + .+.|+
T Consensus 105 ~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~l~V~~~~~-~~~~P~v~~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~ 183 (268)
T 3pl6_D 105 QRTERGDSAVYLCATSALGDTQYFGPGTRLTVLEDLK-NVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWW 183 (268)
T ss_dssp CSCCGGGCEEEEEEEESSSSSCEECCCEEEEEESCGG-GCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEEEEEE
T ss_pred CCCCcccCEEEEEEEecCCCceeeCCcEEEEEecCcc-cccCCceEEeCCCcccccCCCceEEEEEECcccCCCeEEEEE
Confidence 2 3777888876641 22333332100 011233322 233344556999999999988555 4 89999
Q ss_pred eCCEEecCCCCCceE------Ec--CCCC---ceeEEEcCCCCCC-CeeEEEEEEccccc
Q psy2441 148 REMLPVDTSRNPRYN------LL--TSGA---PGALQITNSIEED-QGKYECVAENEVGT 195 (212)
Q Consensus 148 ~~~~~~~~~~~~~~~------~~--~~~~---~~~l~i~~~~~~d-~g~y~C~a~n~~g~ 195 (212)
++|..+... .+.. .. .++. ...|.+.....+| .|.|+|.|.|....
T Consensus 184 ~~g~~l~~~--~~~~~~~~~~~~~~~~~~~~~~s~l~i~~~~~~d~~g~YtC~v~~~~l~ 241 (268)
T 3pl6_D 184 VNGKEVHSG--VCTDPQPLKEQPALNDSRYSLSSRLRVSATFWQNPRNHFRCQVQFYGLS 241 (268)
T ss_dssp ESSSEECTT--EEECSSCEESSTTCTTCCEEEEEEEEEEHHHHSCTTCEEEEEEEECCBC
T ss_pred ECCEECCCC--eEeccccccccccCCCCcEEEEEEEEEcHHHhccCCCEEEEEEEcCCCC
Confidence 999888643 1100 00 1111 2456777777777 99999999987544
No 240
>1x44_A Myosin-binding protein C, SLOW-type; IG-like domain, SLOW- type/skeletal muscle SLOW-isoform, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.64 E-value=2e-15 Score=92.59 Aligned_cols=93 Identities=16% Similarity=0.244 Sum_probs=73.5
Q ss_pred CccccCCcceeEecCCcEEEEEeeeeCCCCceEEEeCCEEecCCCCCceEEcCCCCceeEEEcCCCCCCCeeEEEEEEcc
Q psy2441 113 PQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREMLPVDTSRNPRYNLLTSGAPGALQITNSIEEDQGKYECVAENE 192 (212)
Q Consensus 113 p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~n~ 192 (212)
+.+...+....+.+|+.+.|.|.+.+ |.+.+.|++++..+......++.+..++....|.|.++..+|+|.|.|.|.|
T Consensus 8 ~~~~~~~~~~~v~~G~~v~l~C~~~~-~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n- 85 (103)
T 1x44_A 8 IMVTKQLEDTTAYCGERVELECEVSE-DDANVKWFKNGEEIIPGPKSRYRIRVEGKKHILIIEGATKADAAEYSVMTTG- 85 (103)
T ss_dssp CCCSBCCCCEEEETTEEEEEEEECSS-SSCCCEEEETTEECCCSTTCSEEEEEETTEEEEEEEEECTTTCSEEEEEETT-
T ss_pred ceeeccCCCEEEECCCCEEEEEEecC-CCCeEEEEECCEECCCCCceEEEEEEcCCEEEEEECCCCcccCEEEEEEECC-
Confidence 44666777788999999999999977 6689999999998876522255555554457899999999999999999988
Q ss_pred cccceecceEEEEecceec
Q psy2441 193 VGTEYSPSTMLYVKGTQVD 211 (212)
Q Consensus 193 ~g~~~~~~~~l~v~~~~~p 211 (212)
.... +.|.|.+.+.|
T Consensus 86 ---~~~~-~~l~V~~~p~p 100 (103)
T 1x44_A 86 ---GQSS-AKLSVDLKSGP 100 (103)
T ss_dssp ---EEEE-EEEEEECCCSC
T ss_pred ---CcEE-EEEEEeCCCCC
Confidence 2334 78888877665
No 241
>2dav_A SLOW MYBP-C, myosin-binding protein C, SLOW-type; IG domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.64 E-value=1.6e-15 Score=95.48 Aligned_cols=94 Identities=15% Similarity=0.212 Sum_probs=71.5
Q ss_pred CccccCCcceeEecCCcEEEEEeeeeC---CCCceEEEeCCEE-ecCCCCCceEEcC------CCCceeEEEcCCCCCCC
Q psy2441 113 PQITEAPSTKVVEISHTTVLHCSASGN---PPPKISWIREMLP-VDTSRNPRYNLLT------SGAPGALQITNSIEEDQ 182 (212)
Q Consensus 113 p~~~~~~~~~~~~~g~~~~l~C~~~~~---p~~~i~W~~~~~~-~~~~~~~~~~~~~------~~~~~~l~i~~~~~~d~ 182 (212)
+.|...|....+.+|+++.|.|.+.+. |.|.+.|+|+... +......++.+.. ......|.|.+++..|+
T Consensus 8 ~~F~~~P~~v~V~eG~~v~L~C~v~g~~~~p~P~V~W~Kgk~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~Da 87 (126)
T 2dav_A 8 ILFIEKPQGGTVKVGEDITFIAKVKAEDLLRKPTIKWFKGKWMDLASKAGKHLQLKETFERHSRVYTFEMQIIKAKDNFA 87 (126)
T ss_dssp CSCCSCCCCCEEETTCCEEEEEEEECCCSSSCCEEEEEESSSCCHHHHTTSSEEEEEEEETTTTEEEEEEEECSCCTTSC
T ss_pred cEEEEcCCCeEEeCCCCEEEEEEEeccCCCCCCcEEEeeCcCcccCCCCCceEEEccccccccccceEEEEEccCCcccC
Confidence 567778888899999999999999774 8899999997421 1100112333211 11137899999999999
Q ss_pred eeEEEEEEcccccceecceEEEEec
Q psy2441 183 GKYECVAENEVGTEYSPSTMLYVKG 207 (212)
Q Consensus 183 g~y~C~a~n~~g~~~~~~~~l~v~~ 207 (212)
|.|.|.|.|..|..... +.|.|.+
T Consensus 88 G~Y~Cevsn~~g~~~~~-~~L~V~~ 111 (126)
T 2dav_A 88 GNYRCEVTYKDKFDSCS-FDLEVHE 111 (126)
T ss_dssp EEEEEEEECSSCEEEEC-CEEEEEC
T ss_pred EEEEEEEEeCCCcEEEE-EEEEEEe
Confidence 99999999999988888 9999988
No 242
>3q5y_A TCR N15 beta; IG, T cell receptor, antigen peptide/MHC, membrane, immune S; HET: EPE; 1.90A {Mus musculus} PDB: 1nfd_B* 3q5t_A
Probab=99.64 E-value=4.4e-15 Score=104.77 Aligned_cols=163 Identities=16% Similarity=0.267 Sum_probs=99.0
Q ss_pred eEEeCCCccEEeeCCeEEEEcccCCCCCCcEEEEe--------------CCEEec-CCCCCeeEEe------------ec
Q psy2441 31 QITEAPSTKVVEISHTTVLHCSASGNPPPKISWIR--------------EMLPVD-TSRNPRYNLL------------TS 83 (212)
Q Consensus 31 ~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~k--------------~g~~l~-~~~~~~~~~~------------~~ 83 (212)
.+...|..+.+.+|+.+.|.|.+.+ +.+.|.||| ++.... .....|+.+. ..
T Consensus 4 ~v~~~p~~v~v~~G~~v~L~C~~~~-~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~~v 82 (240)
T 3q5y_A 4 GVVQSPRHIIKEKGGRSVLTCIPIS-GHSNVVWYQQTLGKELKFLIQHYEKVERDKGFLPSRFSVQQFDDYHSEMNMSAL 82 (240)
T ss_dssp CCEEECSEEEEETTCCEEEEEECCT-TCCEEEEEEECTTSCCEEEEEEETTEEEEECSCCTTEEEEECTTSCEEEEECSC
T ss_pred ccccCcceeeecCCCcEEEEEEeCC-CCceEEEEEECCCCCCEEEEEEcCCccccCcccCCeEEEEeCCCCEEEEEECcC
Confidence 4556677889999999999999976 777899999 221111 1111233332 22
Q ss_pred --CCCCeEEEeeeC---------CccceeEEeecCCCCCCCcccc-CCcceeEecCCcEEEEEeeee-CCCC-ceEEEeC
Q psy2441 84 --GAPGTYIKIKPN---------LFSPLSVYSADKIPPGFPQITE-APSTKVVEISHTTVLHCSASG-NPPP-KISWIRE 149 (212)
Q Consensus 84 --~~~g~~l~i~~~---------~~~~~~v~~~~~~~~~~p~~~~-~~~~~~~~~g~~~~l~C~~~~-~p~~-~i~W~~~ 149 (212)
.|.|.|.|.... ....+.|..... ...+|.+.. .+....+..|+.+.|.|.+.+ .|.+ .+.|+++
T Consensus 83 ~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~-~~~~p~~~~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~~~ 161 (240)
T 3q5y_A 83 ELEDSAMYFCASSLRWGDEQYFGPGTRLTVLEDLR-NVTPPKVSLFEPSKAEIANKQKATLVCLARGFFPDHVELSWWVN 161 (240)
T ss_dssp CGGGCEEEEEEEESSTTBCCEECCCEEEEEESCGG-GCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEET
T ss_pred ChhHCEEEEEEEccCCCcceEEcCCEEEEEecccc-CCCCCeeEEeCCchhhcccCCceEEEEEEeeEECCCeEEEEEEC
Confidence 378888887751 222333332100 112243332 233344556899999999988 6656 7899999
Q ss_pred CEEecCCCC--CceEEcCCCC---ceeEEEcCCCCCC-CeeEEEEEEccccc
Q psy2441 150 MLPVDTSRN--PRYNLLTSGA---PGALQITNSIEED-QGKYECVAENEVGT 195 (212)
Q Consensus 150 ~~~~~~~~~--~~~~~~~~~~---~~~l~i~~~~~~d-~g~y~C~a~n~~g~ 195 (212)
+..+..... .......++. .+.|.|.....+| .|.|+|.|.|....
T Consensus 162 g~~l~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~~g~YtC~v~~~~~~ 213 (240)
T 3q5y_A 162 GKEVHSGVSTDPQAYKESNYSYSLSSRLRVSATFWHNPRNHFRCQVQFHGLS 213 (240)
T ss_dssp TEEECTTEEECSSCEEEETTEEEEEEEEEEEHHHHSCTTCEEEEEEEECCBC
T ss_pred CEECcCcEecCCceeeCCCCCEEEEEEEEECHHHhccCCCEEEEEEEcCCCC
Confidence 998865310 0011111111 1358888888888 77999999987543
No 243
>2fbj_H IGA-kappa J539 FAB (heavy chain); immunoglobulin; HET: NAG FUC; 1.95A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mcp_H 2mcp_H*
Probab=99.63 E-value=5e-15 Score=103.21 Aligned_cols=157 Identities=15% Similarity=0.254 Sum_probs=96.1
Q ss_pred CCccEEeeCCeEEEEcccCCCC--CCcEEEEeCC--E---Eec------------CCCCCeeEEeec-------------
Q psy2441 36 PSTKVVEISHTTVLHCSASGNP--PPKISWIREM--L---PVD------------TSRNPRYNLLTS------------- 83 (212)
Q Consensus 36 ~~~~~v~~g~~v~l~C~~~~~p--~~~v~W~k~g--~---~l~------------~~~~~~~~~~~~------------- 83 (212)
+....+.+|++++|.|.+.+.+ .+.+.|||.. . .+. .....|+.+...
T Consensus 7 ~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v 86 (220)
T 2fbj_H 7 SGGGLVQPGGSLKLSCAASGFDFSKYWMSWVRQAPGKGLEWIGEIHPDSGTINYTPSLKDKFIISRDNAKNSLYLQMSKV 86 (220)
T ss_dssp ECCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEECSSSCEEEEEECSC
T ss_pred CCCeEecCCCcEEEEEEecCccCCCceEEEEEECCCCCeEEEEEEccCCCceecCCccCCcEEEEeeCCCCEEEEEECCC
Confidence 3457899999999999998765 5689999852 1 110 011245554421
Q ss_pred --CCCCeEEEeeeCCc---------cceeEEeecCCCCCCCccccCCcceeEecCCcEEEEEeeeeC-CC--CceEEEeC
Q psy2441 84 --GAPGTYIKIKPNLF---------SPLSVYSADKIPPGFPQITEAPSTKVVEISHTTVLHCSASGN-PP--PKISWIRE 149 (212)
Q Consensus 84 --~~~g~~l~i~~~~~---------~~~~v~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~-p~--~~i~W~~~ 149 (212)
.|.|.|.|...... ..+.|... +..+|.+...+ ...+..|+.+.|.|.+.+. |. +.+.|+++
T Consensus 87 ~~~DsG~Y~C~~~~~~~~~~~~~~~~~L~V~~~---~~~~P~v~~~~-~~~~~~g~~v~L~C~~~g~~P~~~~~v~W~~~ 162 (220)
T 2fbj_H 87 RSEDTALYYCARLHYYGYNAYWGQGTLVTVSAE---SARNPTIYPLT-LPPALSSDPVIIGCLIHDYFPSGTMNVTWGKS 162 (220)
T ss_dssp CGGGCEEEEEEEEETTTEEEEECCCEEEEECSS---CCBCCEEEEEC-CCSSSCCSSEEEEEEEEEEBSCCCEEEEESCC
T ss_pred ChhhCEEEEEEEeccccccceecCCEEEEecCC---CCCCCEEEEee-cccccCCCcEEEEEEEEeEECCCcEEEEEecC
Confidence 36777777655421 12222210 11234444333 2234679999999999886 66 69999998
Q ss_pred CEEecCCCCCceEEcCCCC---ceeEEEcCCCCCCCeeEEEEEEcccccce
Q psy2441 150 MLPVDTSRNPRYNLLTSGA---PGALQITNSIEEDQGKYECVAENEVGTEY 197 (212)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~---~~~l~i~~~~~~d~g~y~C~a~n~~g~~~ 197 (212)
+..+........ ...++. .+.|.|.+....|.|.|+|.|.|..|...
T Consensus 163 ~~~~~~~~~~~~-~~~~g~~~~~s~L~i~~~~~~d~g~ytC~v~n~~~~~~ 212 (220)
T 2fbj_H 163 GKDITTVNFPPA-LASGGRYTMSNQLTLPAVECPEGESVKCSVQHDSNPVQ 212 (220)
T ss_dssp CSSCEEEECCCE-ECSSSCEEEEEEEEECGGGSCTTCEEEEEEEETTSCCE
T ss_pred CEecceEecCce-ECCCCCEEEEEEEEECHHHcCCCCeEEEEEEcCCCceE
Confidence 865421100111 111111 14688888888899999999999988764
No 244
>2e6p_A Obscurin-like protein 1; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.63 E-value=3e-15 Score=91.92 Aligned_cols=92 Identities=21% Similarity=0.267 Sum_probs=73.0
Q ss_pred CCccccCCcc---eeEecCCcEEEEEeeeeCCCCceEEEeCCEEecCCCCCceEEcCCCCceeEEEcCCCCCCCeeEEEE
Q psy2441 112 FPQITEAPST---KVVEISHTTVLHCSASGNPPPKISWIREMLPVDTSRNPRYNLLTSGAPGALQITNSIEEDQGKYECV 188 (212)
Q Consensus 112 ~p~~~~~~~~---~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~ 188 (212)
+|.+...+.. ..+.+|+.+.|.|.+.+.|.+ +.|++++..+... .++....++....|.|.++..+|+|.|.|.
T Consensus 7 ~P~~~~~p~~~~~~~v~~G~~v~l~C~~~~~p~~-v~W~k~g~~~~~~--~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~ 83 (104)
T 2e6p_A 7 GPVHILSPQDKVSLTFTTSERVVLTCELSRVDFP-ATWYKDGQKVEES--ELLVVKMDGRKHRLILPEAKVQDSGEFECR 83 (104)
T ss_dssp SSCCCCBCCSCEEEEEESSSCEECCEECSSTTCC-CEEEETTEECCCB--TTBEEEEETTEEEEEESSCCTTTCEEEEEE
T ss_pred CCCEEECCCCCccEEEeCCCcEEEEEEecCCCCc-cEEeeCCEECCCC--CCEEEEeCCCEEEEEECCCChhhCEEEEEE
Confidence 3666666665 688999999999999999998 9999999988765 445444444447899999999999999999
Q ss_pred EEcccccceecceEEEEecceec
Q psy2441 189 AENEVGTEYSPSTMLYVKGTQVD 211 (212)
Q Consensus 189 a~n~~g~~~~~~~~l~v~~~~~p 211 (212)
|.|..+ . +.|.|.+++.|
T Consensus 84 a~n~~~----~-~~l~V~~~P~p 101 (104)
T 2e6p_A 84 TEGVSA----F-FGVTVQDPSGP 101 (104)
T ss_dssp CSSCCC----C-EEEEEECCCCS
T ss_pred ECCceE----E-EEEEEcCCCCC
Confidence 999633 3 77888877654
No 245
>1dn0_B IGM-kappa cold agglutinin (heavy chain); FAB, antibody, human, immune system; 2.28A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1qlr_B* 2j6e_H* 2agj_H* 2h32_H
Probab=99.63 E-value=1.5e-14 Score=101.69 Aligned_cols=166 Identities=17% Similarity=0.218 Sum_probs=93.8
Q ss_pred CCccEEeeCCeEEEEcccCCCC--CCcEEEEeCC--E---Eec-----------CCCCCeeEEeec--------------
Q psy2441 36 PSTKVVEISHTTVLHCSASGNP--PPKISWIREM--L---PVD-----------TSRNPRYNLLTS-------------- 83 (212)
Q Consensus 36 ~~~~~v~~g~~v~l~C~~~~~p--~~~v~W~k~g--~---~l~-----------~~~~~~~~~~~~-------------- 83 (212)
|....+.+|++++|.|.+.+.+ .+.+.|||.. . .+. .....|+.+...
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~ 86 (232)
T 1dn0_B 7 WGAGLLKPSETLSLTCAVYGGSFSDYYWSWIRQPPGKGLEWIGEINHSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVT 86 (232)
T ss_dssp ECCCEECTTSCEEEEEEEESSCCSSCCEEEEEECTTSCCEEEEEECTTCCEEECTTTTTTEEEEEETTTTEEEEEECSCC
T ss_pred CCCEEEeCCCcEEEEEEEccccCCCceEEEEEeCCCCCeEEEEEEecCCceeeCCccCCeEEEEEeCCCCEEEEEECCCC
Confidence 4567899999999999997754 5679999842 1 110 011245554421
Q ss_pred -CCCCeEEEeeeC--C----------ccceeEEeecCCCCCCCccccCCcceeEecC-CcEEEEEeeeeC-CCC-ceEEE
Q psy2441 84 -GAPGTYIKIKPN--L----------FSPLSVYSADKIPPGFPQITEAPSTKVVEIS-HTTVLHCSASGN-PPP-KISWI 147 (212)
Q Consensus 84 -~~~g~~l~i~~~--~----------~~~~~v~~~~~~~~~~p~~~~~~~~~~~~~g-~~~~l~C~~~~~-p~~-~i~W~ 147 (212)
.|.|.|.|.... . ...+.|.. .+..+|.+........+..| +.+.|.|.+.+. |.+ .+.|+
T Consensus 87 ~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~L~V~~---~~~~~P~v~~~~p~~~~~~g~~~v~L~C~~~g~~P~p~~v~W~ 163 (232)
T 1dn0_B 87 AADTAVYYCARPPHDTSGHYWNYWGQGTLVTVSS---GSASAPTLFPLVSCENSPSDTSSVAVGCLAQDFLPDSITFSWK 163 (232)
T ss_dssp GGGCEEEEEEECSSTTSCSCCSEECCCEEEEECS---SCCBCCEEEEEECC------CCSEEEEEEEEEEBSSCCEEEEE
T ss_pred cccCEEEEEEEecCCcCCchhhhcccceEEEEcc---CCCCCCceEEeccccccCCCCCcEEEEEEEEEEeCCCeEEEEE
Confidence 366777776552 1 01122211 01122333321111123468 899999999885 776 99999
Q ss_pred e-CCEEecCCC-CCceEEcCCCC---ceeEEEcCCCC--CCCeeEEEEEEcccccceecceEEEEec
Q psy2441 148 R-EMLPVDTSR-NPRYNLLTSGA---PGALQITNSIE--EDQGKYECVAENEVGTEYSPSTMLYVKG 207 (212)
Q Consensus 148 ~-~~~~~~~~~-~~~~~~~~~~~---~~~l~i~~~~~--~d~g~y~C~a~n~~g~~~~~~~~l~v~~ 207 (212)
+ ++..+.... ..... .++. .+.|.|.+... +|.|.|+|.|.|..+..... ..+.+..
T Consensus 164 ~~~g~~l~~~~~~~~~~--~~~~~~~~s~L~i~~~~~~~~d~g~ytC~v~n~~~~~~~~-~~i~~~~ 227 (232)
T 1dn0_B 164 YKNNSDISSTRGFPSVL--RGGKYAATSQVLLPSKDVMAGTDEHVVCKVQHPNGNKEKN-VPLPVIA 227 (232)
T ss_dssp ETTSCEECCEEECCCEE--ETTEEEEEEEEEECTTCC---CCCEEEEEEECTTCCEEEE-EECCC--
T ss_pred cCCCCceeeEEECCccc--cCCcEEEEEEEEEcHHHhcccCCCeEEEEEEeCCCCccee-EecCCCC
Confidence 9 887764310 00000 0110 25788888887 78999999999998876544 4444433
No 246
>3caf_A Fibroblast growth factor receptor 2; FGFR2, D2, ATP-binding, disease MU ectodermal dysplasia, glycoprotein, heparin-binding, immuno domain, kinase; 1.96A {Homo sapiens} PDB: 3cu1_A* 3euu_A 3dar_A 1wvz_A
Probab=99.62 E-value=2.2e-15 Score=91.83 Aligned_cols=83 Identities=27% Similarity=0.488 Sum_probs=65.9
Q ss_pred cceeEecCCcEEEEEeeeeCCCCceEEEeCCEEecCCC-CCceEEcCCCCceeEEEcCCCCCCCeeEEEEEEccccccee
Q psy2441 120 STKVVEISHTTVLHCSASGNPPPKISWIREMLPVDTSR-NPRYNLLTSGAPGALQITNSIEEDQGKYECVAENEVGTEYS 198 (212)
Q Consensus 120 ~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~-~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~n~~g~~~~ 198 (212)
....+.+|+.+.|.|.+.+.|.|.+.|++++..+.... ...+....+ ...|.|.++..+|+|.|.|.|.|..|....
T Consensus 16 ~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~--~~~L~i~~v~~~D~G~Y~C~a~N~~g~~~~ 93 (100)
T 3caf_A 16 RLHAVPAANTVKFRCPAGGNPMPTMRWLKNGKEFKQEHRIGGYKVRNQ--HWSLIMESVVPSDKGNYTCVVENEYGSINH 93 (100)
T ss_dssp CEEEECTTCCEEEECCEEEESCCEEEEEETTEECCGGGSTTCCEEEGG--GTEEEECSCCGGGCEEEEEEEEETTEEEEE
T ss_pred cEEEecCCCEEEEEEEccccCCCEEEEEECCEEcccccccccEEEecC--eEEEEEccCCcCCCEEEEEEEEeCCCEEEE
Confidence 34678899999999999999999999999998886541 112223222 258999999999999999999999998766
Q ss_pred cceEEEE
Q psy2441 199 PSTMLYV 205 (212)
Q Consensus 199 ~~~~l~v 205 (212)
. +.|.|
T Consensus 94 ~-~~l~V 99 (100)
T 3caf_A 94 T-YHLDV 99 (100)
T ss_dssp E-EEEEE
T ss_pred E-EEEEE
Confidence 5 66654
No 247
>2wbj_D OB TCR; transmembrane, immune response, T cell receptor, MHC II, MEM receptor, molecular mimicry, multiple sclerosis, immune SYS autoimmunity; HET: NAG BMA MAN; 3.00A {Homo sapiens}
Probab=99.62 E-value=4e-15 Score=107.38 Aligned_cols=167 Identities=15% Similarity=0.249 Sum_probs=101.3
Q ss_pred CCeEEeCCCccEEeeCCeEEEEcccCCCCCCcEEEEeCC--EE---e-----------c-CCCCCeeEEeec--------
Q psy2441 29 FPQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREM--LP---V-----------D-TSRNPRYNLLTS-------- 83 (212)
Q Consensus 29 ~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~k~g--~~---l-----------~-~~~~~~~~~~~~-------- 83 (212)
.+.+...|..+.+.+|++++|.|.+.+.+.+.+.|||++ .. + . .....|+.+...
T Consensus 24 ~~~v~~~p~~v~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~ 103 (279)
T 2wbj_D 24 GAVVSQHPSWVISKSGTSVKIECRSLDFQATTMFWYRQFPKQSLMLMATSNEGSKATYEQGVEKDKFLINHASLTLSTLT 103 (279)
T ss_dssp CCCEEEECSEEEEETTSCEEEEEEESSSCEEEEEEEEECSSSCCEEEEEEESSSCCCCCSSSCSSSEEEEECSSSEEEEE
T ss_pred cceEEeCCCeEEecCCCeEEEEEEeCCCCCCeEEEEEeCCCCCeEEEEEEecCCcceecCCccCCcEEEEeCCCCEEEEE
Confidence 466777788899999999999999988888899999963 11 1 0 001245544321
Q ss_pred ------CCCCeEEEeeeCC------------ccceeEEeecCCCCCCCccccC-CcceeEecCCcEEEEEeeeeC-CC-C
Q psy2441 84 ------GAPGTYIKIKPNL------------FSPLSVYSADKIPPGFPQITEA-PSTKVVEISHTTVLHCSASGN-PP-P 142 (212)
Q Consensus 84 ------~~~g~~l~i~~~~------------~~~~~v~~~~~~~~~~p~~~~~-~~~~~~~~g~~~~l~C~~~~~-p~-~ 142 (212)
+|.|.|.|..... ...+.|..... ...+|.+... +....+.+|+.+.|.|.+.+. |. +
T Consensus 104 I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~l~V~~~~~-~~~~P~v~~~~~~~~~~~~g~~v~L~C~~~g~~P~~~ 182 (279)
T 2wbj_D 104 VTSAHPEDSSFYICSARDLTSGANNEQFFGPGTRLTVTEDLK-NVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHV 182 (279)
T ss_dssp ESSCCGGGCEEEEEEEEETTCBTSCCEEECCCEEEEEESCGG-GCBCCEEEEEECCHHHHHHHSCCEEEEEEEEEBSSCE
T ss_pred EccCCccCCEEEEEEEcccccCCccceeeCCCEEEEEecCCC-CCCCCEEEEECCCcccccCCCceEEEEEEeeEcCCCc
Confidence 3777787766541 12233332100 0112444322 222334468999999999886 43 6
Q ss_pred ceEEEeCCEEecCCCCC--ce-E-Ec--CCCC---ceeEEEcCCCCCC-CeeEEEEEEcccccc
Q psy2441 143 KISWIREMLPVDTSRNP--RY-N-LL--TSGA---PGALQITNSIEED-QGKYECVAENEVGTE 196 (212)
Q Consensus 143 ~i~W~~~~~~~~~~~~~--~~-~-~~--~~~~---~~~l~i~~~~~~d-~g~y~C~a~n~~g~~ 196 (212)
.+.|++++..+...... .. . .. .++. .+.|.|......| .|.|+|.|.|.....
T Consensus 183 ~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~~~~YtC~v~n~~~~~ 246 (279)
T 2wbj_D 183 ELSWWVNGKEVHSGVSTDPQPLKEQPALNDSRYSLSSRLRVSATFWQNPRNHFRCQVQFYGLSE 246 (279)
T ss_dssp EEEEEETTEECCTTEEECSSCEESSTTSTTCCEEEEEEEECCSTTTTCTTCEEEEEEEECCBCT
T ss_pred EEEEEECCEECCCCcccccccccccccCCCCcEEEEEEEEEChHHhccCCCEEEEEEEeCCCCC
Confidence 99999999887653100 00 0 00 1111 2457787777654 678999999976543
No 248
>2w59_A IGY FCU3-4; immunoglobulin, avian, immune system; HET: NAG MAN; 1.75A {Gallus gallus}
Probab=99.62 E-value=1.9e-15 Score=106.16 Aligned_cols=167 Identities=19% Similarity=0.199 Sum_probs=100.8
Q ss_pred CCCeEE-eCCCccEEeeCCeEEEEcccCC-CCC-C-cEEEEeCCEEe-cCC-------CCCee------EEeec--CCCC
Q psy2441 28 GFPQIT-EAPSTKVVEISHTTVLHCSASG-NPP-P-KISWIREMLPV-DTS-------RNPRY------NLLTS--GAPG 87 (212)
Q Consensus 28 ~~p~~~-~~~~~~~v~~g~~v~l~C~~~~-~p~-~-~v~W~k~g~~l-~~~-------~~~~~------~~~~~--~~~g 87 (212)
.+|.+. ..|....+.+|+.++|.|.+.+ +|. + .|.|+|+|..+ ... .+..+ .+... +|.|
T Consensus 11 ~~P~v~~~~p~~~~v~~G~~v~L~C~~~g~~P~~p~~v~W~~~g~~~~~~~~~~~~~~~~g~~~~~s~L~I~~~~~~D~g 90 (231)
T 2w59_A 11 SPIQLYAIPPSPGELYISLDAKLRCLVVNLPSDSSLSVTWTREKSGNLRPDPMVLQEHFNGTYSASSAVPVSTQDWLSGE 90 (231)
T ss_dssp -CCEEEEECCCHHHHHTSCCCEEEEEEEEESCCTTCEEEEECSSSSCCCCCCCEEEECTTSCEEEEEEEECCHHHHHTTC
T ss_pred CCCEEEEeCcChhhcccCCceEEEEEEeCccCCCCeEEEEEcCCeeccccccccceECCCCcEEEEEEEEecchhccCCC
Confidence 456654 5677777889999999999987 464 4 89999999877 221 01221 12111 3678
Q ss_pred eEEEeeeCCcc--ceeEEeecC-CCCCCCccccC-CcceeEecCCcEEEEEeeeeC-C-CCceEEEeCCEEecCCCCCc-
Q psy2441 88 TYIKIKPNLFS--PLSVYSADK-IPPGFPQITEA-PSTKVVEISHTTVLHCSASGN-P-PPKISWIREMLPVDTSRNPR- 160 (212)
Q Consensus 88 ~~l~i~~~~~~--~~~v~~~~~-~~~~~p~~~~~-~~~~~~~~g~~~~l~C~~~~~-p-~~~i~W~~~~~~~~~~~~~~- 160 (212)
.|.|....... .+.+..... ....+|.+... +....+ .++.+.|.|.+.+. | .+.|.|+++|..+.......
T Consensus 91 ~Y~C~~~~~~~~~~~~~~v~~~~~~~~~P~v~v~~~~~~~~-~~~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~ 169 (231)
T 2w59_A 91 RFTCTVQHEELPLPLSKSVYRNTGPTTPPLIYPFAPHPEEL-SLSRVTLSCLVRGFRPRDIEIRWLRDHRAVPATEFVTT 169 (231)
T ss_dssp CEEEEEECTTCSSCEEEEECCCCSCCBCCEEEEECCCGGGG-GSSEEEEEEEEEEEBSSCCEEEEEETTEECCGGGCEEC
T ss_pred EEEEEEEcCCCCCceEEEEecCCCCCcCCEEEEeCCCHHHh-ccCceEEEEEEEeccCCCcEEEEEECCEECCCcccccC
Confidence 88988776322 222222110 01123444332 222222 35679999999885 4 36999999999886531000
Q ss_pred -eEEc--------CC-CC---ceeEEEcCCCCCCCeeEEEEEEccccc
Q psy2441 161 -YNLL--------TS-GA---PGALQITNSIEEDQGKYECVAENEVGT 195 (212)
Q Consensus 161 -~~~~--------~~-~~---~~~l~i~~~~~~d~g~y~C~a~n~~g~ 195 (212)
+... .+ +. .+.|.|.....+|.|.|+|.|.|....
T Consensus 170 ~~~~~~~~~~~~~~d~gt~~~~s~L~i~~~~~~~~g~YtC~v~n~~l~ 217 (231)
T 2w59_A 170 AVLPEERTANGAGGDGDTFFVYSKMSVETAKWNGGTVFACMAVHEALP 217 (231)
T ss_dssp CCEECCTTSCC---CCCCEEEEEEEEEEHHHHHTTCCEEEEEECTTST
T ss_pred ccccCcccccccCCCCCeEEEEEEEEEeHHHcCCCCcEEEEEEcCCCC
Confidence 1111 12 11 256778877888899999999997654
No 249
>1op3_H FAB 2G12, heavy chain; domain-swapped FAB 2G12, anti-carbohydrate antibody, immune system; HET: MAN; 1.75A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1om3_H* 1op5_H* 3oay_M* 1zlu_H* 1zlv_H* 1zlw_H* 2oqj_B 1zls_H* 3ob0_H* 3oau_H* 3oaz_H* 3ghe_H 3eyf_B 3eyo_B 3ghb_H 3c2a_H 1q1j_H 2fl5_H*
Probab=99.62 E-value=3.1e-15 Score=104.64 Aligned_cols=155 Identities=18% Similarity=0.320 Sum_probs=94.4
Q ss_pred CCccEEeeCCeEEEEcccCCCC--CCcEEEEeCC--EEec---------------CCCCCeeEEeec-------------
Q psy2441 36 PSTKVVEISHTTVLHCSASGNP--PPKISWIREM--LPVD---------------TSRNPRYNLLTS------------- 83 (212)
Q Consensus 36 ~~~~~v~~g~~v~l~C~~~~~p--~~~v~W~k~g--~~l~---------------~~~~~~~~~~~~------------- 83 (212)
|....+.+|++++|.|.+.+.+ .+.+.|||+. ..+. .....|+.+...
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v 86 (225)
T 1op3_H 7 SGGGLVKAGGSLILSCGVSNFRISAHTMNWVRRVPGGGLEWVASISTSSTYRDYADAVKGRFTVSRDDLEDFVYLQMHKM 86 (225)
T ss_dssp ECCEEEETTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECGGGCCEEECTTTTTTEEEEEETTTTEEEEEECSC
T ss_pred CCCeEecCCCCEEEEEEecCcccCCceEEEEEeCCCCCcEEEEEEccCCCccccCcccCCceEEEecCCCCEEEEEECCC
Confidence 4457899999999999998766 6789999852 2110 011245544321
Q ss_pred --CCCCeEEEeeeCCc--------------cceeEEeecCCCCCCCcccc-CCcceeEecCCcEEEEEeeeeC-CCC-ce
Q psy2441 84 --GAPGTYIKIKPNLF--------------SPLSVYSADKIPPGFPQITE-APSTKVVEISHTTVLHCSASGN-PPP-KI 144 (212)
Q Consensus 84 --~~~g~~l~i~~~~~--------------~~~~v~~~~~~~~~~p~~~~-~~~~~~~~~g~~~~l~C~~~~~-p~~-~i 144 (212)
.|.|.|.|...... ..+.|.. .++.+|.+.. .+.. .+..|+.+.|.|.+.+. |.| .+
T Consensus 87 ~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~L~V~~---~~~~~P~v~~~~~~~-~~~~g~~v~L~C~~~g~~P~p~~v 162 (225)
T 1op3_H 87 RVEDTAIYYCARKGSDRLSDNDPFDAWGPGTVVTVSP---ASTKGPSVFPLAPSS-KSTSGGTAALGCLVKDYFPEPVTV 162 (225)
T ss_dssp CGGGCEEEEEEEECCSSCCSSCCEEEECCCEEEEEES---CSCBCCEEEEECCCT-TCCCCCEEEEEEEEEEEBSSCCEE
T ss_pred ChhhCEEEEEEEecCCCccccccceeecCCEEEeccc---CCCcCCeEEEecccc-cccCCCcEEEEEEEEeEECCCeEE
Confidence 37788888766532 1222221 1112244332 2222 24579999999999886 766 99
Q ss_pred EEEeCCEEecCCCCCceEEcCCCC---ceeEEEcCCCCCCCeeEEEEEEcccccc
Q psy2441 145 SWIREMLPVDTSRNPRYNLLTSGA---PGALQITNSIEEDQGKYECVAENEVGTE 196 (212)
Q Consensus 145 ~W~~~~~~~~~~~~~~~~~~~~~~---~~~l~i~~~~~~d~g~y~C~a~n~~g~~ 196 (212)
.|++++..+........ ...++. .+.|.|.+...+| |.|+|.|.|..+..
T Consensus 163 ~W~~~~~~~~~~~~~~~-~~~~g~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~~~ 215 (225)
T 1op3_H 163 SWNSGALTSGVHTFPAV-LQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNT 215 (225)
T ss_dssp ECCTTSCCTTCEECCCE-ECTTSCEEEEEEEEEEGGGTTC-CCCCEEEEEGGGTE
T ss_pred EEecCCCcCCeEecCce-eCCCCCEEEEEEEEEechhcCC-CcEEEEEEcCCCCc
Confidence 99998865321101111 111111 2468999888888 99999999976543
No 250
>2v5y_A Receptor-type tyrosine-protein phosphatase MU; membrane, hydrolase, glycoprotein, receptor protei tyrosine phosphatase, cell adhesion; HET: NAG; 3.10A {Homo sapiens}
Probab=99.62 E-value=4.9e-15 Score=120.29 Aligned_cols=163 Identities=16% Similarity=0.147 Sum_probs=105.8
Q ss_pred CeEEEEcccCCCCCCcEEEEeCCEEecCCCCCeeEEeec-CCC--CeEEEeeeCCccceeEE---eecCCCCCCCccccC
Q psy2441 45 HTTVLHCSASGNPPPKISWIREMLPVDTSRNPRYNLLTS-GAP--GTYIKIKPNLFSPLSVY---SADKIPPGFPQITEA 118 (212)
Q Consensus 45 ~~v~l~C~~~~~p~~~v~W~k~g~~l~~~~~~~~~~~~~-~~~--g~~l~i~~~~~~~~~v~---~~~~~~~~~p~~~~~ 118 (212)
..+.|.|.+.|.|.+.+.|.|+|..+..-...++.+... ++. +.+.|+.......+... ........+|.+. .
T Consensus 92 g~l~v~c~~~g~P~p~i~W~k~g~~~~~~~~~~~~i~~~~~~~~~l~~~~va~~~~G~~~~~~v~~~~~~~~~~p~~~-~ 170 (731)
T 2v5y_A 92 GLLNVYVKVNNGPLGNPIWNISGDPTRTWNRAELAISTFWPNFYQVIFEVITSGHQGYLAIDEVKVLGHPCTRTPHFL-R 170 (731)
T ss_dssp EEEEEEEEETTCCCCSEEEEECCCCCSSCEEEEEEECCCTTSCEEEEEEEEECSSCCEEEECCBEEESSCCSSSCEEC-C
T ss_pred ceEEEEEecCCCCccceeEEEeCCcCCceeEEEEEEeecCCCceEEEEEEEecCCceEEEEeeEEeeecccccccccc-c
Confidence 488999999999999999999997765431223333321 111 23334443322221111 1111112235555 4
Q ss_pred CcceeEecCCcEEEEEeeeeCCCCceE-EE--eCCEEecCCCCCceEEcCCCCceeEEEcCCCCCCCeeEEEEEEccccc
Q psy2441 119 PSTKVVEISHTTVLHCSASGNPPPKIS-WI--REMLPVDTSRNPRYNLLTSGAPGALQITNSIEEDQGKYECVAENEVGT 195 (212)
Q Consensus 119 ~~~~~~~~g~~~~l~C~~~~~p~~~i~-W~--~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~n~~g~ 195 (212)
+....+.+|+.+.|.|.+.|.|.|.+. |+ +++..+... ...........+.|.|.++...|.|.|.|.|.|..|.
T Consensus 171 ~~~~~v~~G~~v~l~C~~~g~P~p~i~~W~~~~~g~~l~~~--~~~~~~~~~~~~~l~I~~~~~~d~g~Y~c~A~n~~G~ 248 (731)
T 2v5y_A 171 IQNVEVNAGQFATFQCSAIGRTVAGDRLWLQGIDVRDAPLK--EIKVTSSRRFIASFNVVNTTKRDAGKYRCMIRTEGGV 248 (731)
T ss_dssp CCCEEEETTSCEEEEEEEESCCCTTCEEEEEESSSCCEEEE--EEEECCSSEEEEEEEECSCCTTTCEEEEEEEEETTEE
T ss_pred ccceEEeCCCcEEEEEEeCCCCCCceeEEEecCCCcccccc--ceEEeccccceEEEEEcccccccCeEEEEEEECCCCC
Confidence 567889999999999999999999988 87 677665432 1111111111368999999999999999999999998
Q ss_pred -ceecceEEEEecceec
Q psy2441 196 -EYSPSTMLYVKGTQVD 211 (212)
Q Consensus 196 -~~~~~~~l~v~~~~~p 211 (212)
.... +.|.|+.++.|
T Consensus 249 ~~s~~-~~l~V~~~P~~ 264 (731)
T 2v5y_A 249 GISNY-AELVVKEPPVP 264 (731)
T ss_dssp EECCC-EEEEEECCCCB
T ss_pred cceee-EEEEEecCCCC
Confidence 4444 78888776544
No 251
>2dru_A Chimera of CD48 antigen and T-cell surface antige; CD2 binding domain of CD48, immune system; HET: NAG; 2.60A {Rattus norvegicus}
Probab=99.62 E-value=7.7e-15 Score=99.13 Aligned_cols=137 Identities=13% Similarity=0.149 Sum_probs=86.5
Q ss_pred CccEEeeCCeEEEEcccCC-CCCCcEEEEeC-CEEec------------CCCCCeeEEe---------ec--CCCCeEEE
Q psy2441 37 STKVVEISHTTVLHCSASG-NPPPKISWIRE-MLPVD------------TSRNPRYNLL---------TS--GAPGTYIK 91 (212)
Q Consensus 37 ~~~~v~~g~~v~l~C~~~~-~p~~~v~W~k~-g~~l~------------~~~~~~~~~~---------~~--~~~g~~l~ 91 (212)
..+.+.+|++|+|.|.+.+ .+.+.|.|+|+ +..+. .....|+.+. .. .|.|.|.|
T Consensus 7 ~~v~v~~G~~vtL~c~~~~~~~~~~i~W~k~~~~~i~~~~~~~~~~~~~~~~~~R~~l~~~~~sL~I~~v~~~D~G~Y~C 86 (180)
T 2dru_A 7 PNVNAITGSNVTLTILKHPLASYQRLTWLHTTNQKILEYFPNGKKTVFESVFKDRVDLDKTNGALRIYNVSKEDRGDYYM 86 (180)
T ss_dssp CEEEEETTSCEEECCCSSCCCSCSEEEEESSSSCEEEEECSSSCEEECSSTTTTTEEECTTTCCEEECSCCGGGCEEEEE
T ss_pred ceEEEEeCCCEEEeCCCCCCCceeEEEEEecCCeEEEEEECCCCeeEcchhcCCeEEEeCCCccEEEcCCCHHHCeEEEE
Confidence 4578899999999999854 34678999994 32221 1112444441 11 36777777
Q ss_pred eeeCCc-----cceeEEeecCCCCCCCccccCCcceeEecCCcEEEEEee-eeCCCCceEEEeCCEEecCCCCCceEEcC
Q psy2441 92 IKPNLF-----SPLSVYSADKIPPGFPQITEAPSTKVVEISHTTVLHCSA-SGNPPPKISWIREMLPVDTSRNPRYNLLT 165 (212)
Q Consensus 92 i~~~~~-----~~~~v~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~-~~~p~~~i~W~~~~~~~~~~~~~~~~~~~ 165 (212)
...... ..+.|+. +...|.+ ...+..+.|.|.+ .+ |.|.+.|++++..+... .
T Consensus 87 ~v~~~~~~~~~~~L~V~~----~~~~P~i--------~~~~~~v~L~C~~~~g-p~p~i~W~~~~~~l~~~--------~ 145 (180)
T 2dru_A 87 RMLHETEDQWKITMEVYE----MVSKPMI--------YWECSNATLTCEVLEG-TDVELKLYQGKEHLRSL--------R 145 (180)
T ss_dssp EEESSSEEEEEEEEEEEC----CCCCCEE--------EEEGGGTEEEEECSSC-TTCEEEEEETTEEEEEE--------S
T ss_pred EEEcCCeEEEEEEEEEEC----CCCCCEE--------EecCCCEEEEEEeCCC-CCCEEEEEECCeECcCC--------C
Confidence 644422 1222221 1111222 1235679999999 66 88999999999877521 1
Q ss_pred CCCceeEEEcCCCCCCCeeEEEEEEcccccceec
Q psy2441 166 SGAPGALQITNSIEEDQGKYECVAENEVGTEYSP 199 (212)
Q Consensus 166 ~~~~~~l~i~~~~~~d~g~y~C~a~n~~g~~~~~ 199 (212)
+ .+|.+.. .+|.|.|+|.|.|..+.....
T Consensus 146 ~---~~l~~~~--~~d~g~Y~C~a~N~~~~~~~~ 174 (180)
T 2dru_A 146 Q---KTMSYQW--TNLRAPFKCKAVNRVSQESEM 174 (180)
T ss_dssp S---SEEEEEC--SCCSSCEEEEEEETTEEEEEE
T ss_pred C---CEEEEEE--hhcCccEEEEEecCcCccccc
Confidence 1 4566633 778999999999998877544
No 252
>1wwb_X Protein (brain derived neurotrophic factor receptor TRKB); TRK receptor, receptor tyrosine kinase, 3D-domain swapping, transferase; 2.10A {Homo sapiens} SCOP: b.1.1.4 PDB: 1hcf_X
Probab=99.61 E-value=3.9e-15 Score=91.27 Aligned_cols=85 Identities=21% Similarity=0.329 Sum_probs=65.3
Q ss_pred ecCCcEEEEEeeeeCCCCceEEEeCCEEecCCCCCceEEc--CCC-CceeEEEcCCCCCCCeeEEEEEEcccccceecce
Q psy2441 125 EISHTTVLHCSASGNPPPKISWIREMLPVDTSRNPRYNLL--TSG-APGALQITNSIEEDQGKYECVAENEVGTEYSPST 201 (212)
Q Consensus 125 ~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~--~~~-~~~~l~i~~~~~~d~g~y~C~a~n~~g~~~~~~~ 201 (212)
..+..+.|.|.+.|.|.|.+.|++++..+........... ... ..+.|.|.++..+|+|.|+|.|.|..|..... +
T Consensus 14 ~~~~~~~~~c~v~G~P~P~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~N~~G~~~~~-~ 92 (103)
T 1wwb_X 14 TSDHHWCIPFTVKGNPKPALQWFYNGAILNESKYICTKIHVTNHTEYHGCLQLDNPTHMNNGDYTLIAKNEYGKDEKQ-I 92 (103)
T ss_dssp CCCCEEEEEEEEECSSCCEEEEEETTEEECCCSSEEEEEEEECSSEEEEEEEEESCCGGGCEEEEEEEECSSCEEEEE-E
T ss_pred eECcEEEEEEEEEEeCCCEEEEEECCEECCCCCcEeEEEEecCCcEEEEEEEECCCCcccCEEEEEEEEeCCCcEeEE-E
Confidence 3477899999999999999999999999876521112111 110 12469999999999999999999999998877 7
Q ss_pred EEEEeccee
Q psy2441 202 MLYVKGTQV 210 (212)
Q Consensus 202 ~l~v~~~~~ 210 (212)
.|.|...+.
T Consensus 93 ~l~V~~~P~ 101 (103)
T 1wwb_X 93 SAHFMGWPG 101 (103)
T ss_dssp EECCSCCCC
T ss_pred EEEECCCCC
Confidence 777766554
No 253
>3mtr_A N-CAM-1, NCAM-1, neural cell adhesion molecule 1; immunoglobulin domain, fibronectin type III repeat, CE adhesion; 1.80A {Homo sapiens}
Probab=99.61 E-value=4.4e-15 Score=103.06 Aligned_cols=173 Identities=18% Similarity=0.182 Sum_probs=107.8
Q ss_pred CCCCeEEeCCCccEEeeCCeEEEEcccCCCCCCcEEEEeCCEEecCCCCCeeEEe-----------ec--CCCCeEEEee
Q psy2441 27 PGFPQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREMLPVDTSRNPRYNLL-----------TS--GAPGTYIKIK 93 (212)
Q Consensus 27 ~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~k~g~~l~~~~~~~~~~~-----------~~--~~~g~~l~i~ 93 (212)
..+|.+ ..+....+.+|+.+.|.|.+.+.|.+.+.|+|+|..+......++.+. .. .|.|.|.|..
T Consensus 17 ~~~P~~-~~p~~~~~~~G~~v~l~C~~~g~p~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a 95 (215)
T 3mtr_A 17 MYAPKL-QGPVAVYTWEGNQVNITCEVFAYPSATISWFRDGQLLPSSNYSNIKIYNTPSASYLEVTPDSENDFGNYNCTA 95 (215)
T ss_dssp CEEEEE-ECCSEEEECTTCCEEEEEEEEEESCCEEEEEETTEESSCSSSCSEEEEEETTEEEEEECCCSGGGCEEEEEEE
T ss_pred ecCCcc-cCCceEEEECCCCEEEEEEEeecCCCEEEEEECCeECCCCCCccEEEecCCCeeEEEEecCChhhCeEEEEEE
Confidence 456777 577778899999999999999999999999999999876532333332 11 3778888887
Q ss_pred eCCcc--ceeEEeecCCCCCCCccccCCcceeEecCCcEEEEEeeee----CCCC--ceEEEeCCEEecCCCCCceEEcC
Q psy2441 94 PNLFS--PLSVYSADKIPPGFPQITEAPSTKVVEISHTTVLHCSASG----NPPP--KISWIREMLPVDTSRNPRYNLLT 165 (212)
Q Consensus 94 ~~~~~--~~~v~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~----~p~~--~i~W~~~~~~~~~~~~~~~~~~~ 165 (212)
.+... ...+......++.+|... .....+..+.|.|.... .|.. .+.|.+++...... ..+....
T Consensus 96 ~n~~g~~~~~~~l~v~~~P~~p~~~-----~~~~~~~~~~l~w~~p~~~~~~pi~~y~v~~~~~~~~~w~~--~~~~~~~ 168 (215)
T 3mtr_A 96 VNRIGQESLEFILVQADTPSSPSID-----QVEPYSSTAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHS--KWYDAKE 168 (215)
T ss_dssp ECSSCEEEEEEEEEECCCCCCCEEE-----EEEEETTEEEEEEECCSCCCSSCEEEEEEEEEETTCCCCEE--EEEEHHH
T ss_pred EECCCceEEEEEEEECCCCCCCcce-----EEEEecceEEEEEecCCccCCCceEEEEEEEEECCCCcccc--ccccccc
Confidence 76222 222222222233333211 11234677899987432 2332 36687765431110 0000111
Q ss_pred CCCceeEEEcCCCCCCCeeEEEEEEcccccceecceEEEEecc
Q psy2441 166 SGAPGALQITNSIEEDQGKYECVAENEVGTEYSPSTMLYVKGT 208 (212)
Q Consensus 166 ~~~~~~l~i~~~~~~d~g~y~C~a~n~~g~~~~~~~~l~v~~~ 208 (212)
......|.|.++...+.+.|.|.|.|..|..... ..+.++..
T Consensus 169 ~~~~~~l~i~~L~~~~~y~~~~~A~N~~G~s~~S-~~~~v~T~ 210 (215)
T 3mtr_A 169 ASMEGIVTIVGLKPETTYAVRLAALNGKGLGEIS-AASEFKTQ 210 (215)
T ss_dssp HHHHTEEEEECCCTTCEEEEEEEEEESSCBCCCC-CCEEEECC
T ss_pred ccccccEEECCCCCCCEEEEEEEEEeCCcccCcc-cceeeEec
Confidence 0011579999999999999999999999988766 55555543
No 254
>1dee_B IGM RF 2A2; FAB-IBP complex 2.7A resolution binding outside the antigen combining site superantigen FAB VH3 specificity; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1hez_B 1adq_H
Probab=99.61 E-value=3.6e-14 Score=99.07 Aligned_cols=156 Identities=19% Similarity=0.280 Sum_probs=96.3
Q ss_pred CCccEEeeCCeEEEEcccCCCC--CCcEEEEeCC--E---Eec------------CCCCCeeEEeec-------------
Q psy2441 36 PSTKVVEISHTTVLHCSASGNP--PPKISWIREM--L---PVD------------TSRNPRYNLLTS------------- 83 (212)
Q Consensus 36 ~~~~~v~~g~~v~l~C~~~~~p--~~~v~W~k~g--~---~l~------------~~~~~~~~~~~~------------- 83 (212)
|..+.+.+|++++|.|.+.+.+ .+.+.|||.. . .+. .....|+.+...
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v 86 (223)
T 1dee_B 7 SGGGVVQPGKSLRLSCAASGFTFSGYGMHWVRQAPGKGLEWVALISYDESNKYYADSVKGRFTISRDNSKNTLYLQMNSL 86 (223)
T ss_dssp ECCCEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSCCEEECTTTBTTEEEEEETTTTEEEEEECSC
T ss_pred CCCEEEcCCCcEEEEEEecCcccCCceEEEEEECCCCCcEEEEEEecCCCccccCcccCCeEEEEecCCCCEEEEEECCC
Confidence 3577899999999999998765 4679999842 1 110 011245554321
Q ss_pred --CCCCeEEEeeeCCc------------cceeEEeecCCCCCCCccccCCcceeEecCCcEEEEEeeeeC-CCC-ceEEE
Q psy2441 84 --GAPGTYIKIKPNLF------------SPLSVYSADKIPPGFPQITEAPSTKVVEISHTTVLHCSASGN-PPP-KISWI 147 (212)
Q Consensus 84 --~~~g~~l~i~~~~~------------~~~~v~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~-p~~-~i~W~ 147 (212)
.|.|.|.|...... ..+.|.. .++.+|.+........+.+|+.+.|.|.+.+. |.| .+.|+
T Consensus 87 ~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~L~V~~---~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~ 163 (223)
T 1dee_B 87 RAEDTAVYYCAKVKFYDPTAPNDYWGQGTLVTVSS---GSASAPTLFPLVSCENSNPSSTVAVGCLAQDFLPDSITFSWK 163 (223)
T ss_dssp CGGGCEEEEEEEESSSSTTCCEEEECCCEEEEECS---SCCBCCEEEEEECTTCCCSSSEEEEEEEEEEEBSSCCEEEEE
T ss_pred CHHHCEEEEEEEeccccCcccceeecCcEEEEEcc---CCCCCCEEEEecCCcccCCCCcEEEEEEEEEEeCCCeEEEeE
Confidence 36777777665431 1222221 11122444322111224579999999999886 766 99999
Q ss_pred e-CCEEecCC-------CCCceEEcCCCCceeEEEcCCCC--CCCeeEEEEEEcccccceec
Q psy2441 148 R-EMLPVDTS-------RNPRYNLLTSGAPGALQITNSIE--EDQGKYECVAENEVGTEYSP 199 (212)
Q Consensus 148 ~-~~~~~~~~-------~~~~~~~~~~~~~~~l~i~~~~~--~d~g~y~C~a~n~~g~~~~~ 199 (212)
+ ++..+... ....+.. .+.|.|..... +|.|.|+|.|.|..+.....
T Consensus 164 ~~~g~~l~~~~~~~~~~~~~~~~~-----~s~L~i~~~~~~~~d~g~y~C~v~n~~~~~~~~ 220 (223)
T 1dee_B 164 YKNNSDISSTRGFPSVLRGGKYAA-----TSQVLLPSKDVAQGTNEHVVCKVQHPNGNKEKD 220 (223)
T ss_dssp ETTSCBCSCEEECCCEEETTEEEE-----EEEEEEECTTTTSTTCCEEEEEEECTTCCEEEE
T ss_pred ccCCCccceeEECCccccCCeEEE-----EEEEEEcHHHhccCCCCEEEEEEEeCCCCCccc
Confidence 9 88766431 0011111 25688887776 78999999999998876543
No 255
>2edf_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.61 E-value=2.1e-15 Score=92.48 Aligned_cols=92 Identities=21% Similarity=0.368 Sum_probs=73.7
Q ss_pred CCccccCCcceeEecCCcEEEEEeeeeCCCCceEEEeCCEEecCCCCCceEEcCCCCceeEEEcCCCCCCCeeEEEEEEc
Q psy2441 112 FPQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREMLPVDTSRNPRYNLLTSGAPGALQITNSIEEDQGKYECVAEN 191 (212)
Q Consensus 112 ~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~n 191 (212)
+|.+...+....+.+|+.+.|.|.+.+ |.+.+.|++++..+... .++....++....|.|.++..+|+|.|.|.|.|
T Consensus 8 pp~~~~~~~~~~v~~G~~v~l~C~~~~-~~~~v~W~k~g~~~~~~--~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n 84 (103)
T 2edf_A 8 PAAIIKPLEDQWVAPGEDVELRCELSR-AGTPVHWLKDRKAIRKS--QKYDVVCEGTMAMLVIRGASLKDAGEYTCEVEA 84 (103)
T ss_dssp CCCEEECCCCEEECTTSCEEECCEESS-SSCCCCEEESSCBCCCS--SSEEEEEETTEEEEEESSCCTTTCSEEEEECSS
T ss_pred CcEEEecCCccEEcCCCCEEEEEEEeC-CCCcEEEEECCEEccCC--CCEEEEECCCEEEEEECCCCcccCEEEEEEEcc
Confidence 467777777888999999999999987 77899999999888764 455555554446899999999999999999999
Q ss_pred ccccceecceEEEEecceec
Q psy2441 192 EVGTEYSPSTMLYVKGTQVD 211 (212)
Q Consensus 192 ~~g~~~~~~~~l~v~~~~~p 211 (212)
.... +.|.|.+++.|
T Consensus 85 ----~~~~-~~l~V~~~p~~ 99 (103)
T 2edf_A 85 ----SKST-ASLHVEEKASG 99 (103)
T ss_dssp ----CEEE-EEEEECCCSSS
T ss_pred ----CCcE-EEEEEeCCCCC
Confidence 2334 77888776654
No 256
>1mq8_A ICAM-1, intercellular adhesion molecule-1, CD54 antigen; IG superfamily, rossmann fold, metal mediated protein interf immune system; HET: NAG; 3.30A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4
Probab=99.61 E-value=1.2e-16 Score=115.46 Aligned_cols=192 Identities=13% Similarity=0.137 Sum_probs=56.3
Q ss_pred eeeEEEeeccCCCcceecccccCCCCCeE-EeCCCccEEeeCCeEEEEcccCCC-CCC--cEEEEeCCEEecCCC-----
Q psy2441 4 GTYIKIKPNLFSPLSVYSADKIPPGFPQI-TEAPSTKVVEISHTTVLHCSASGN-PPP--KISWIREMLPVDTSR----- 74 (212)
Q Consensus 4 g~Y~C~~~~~~~~~~~~~~~~~~~~~p~~-~~~~~~~~v~~g~~v~l~C~~~~~-p~~--~v~W~k~g~~l~~~~----- 74 (212)
+.|+|++. ..+........+.+..+|.- .+.+....+.+|+.++|.|.+.+. |.. +|+|||++..+....
T Consensus 61 ~~y~C~~~-~~~~~~~~~v~l~V~~~P~~v~I~~~~~~~~~G~~~~LtC~v~g~~P~~~l~itW~kg~~~l~~~~~~~~~ 139 (291)
T 1mq8_A 61 SQPMCYSN-CPDGQSTAKTFLTVYWTPERVELAPLPSWQPVGKNLTLRCQVEGGAPRANLTVVLLRGEKELKREPAVGEP 139 (291)
T ss_dssp CCCEEEEE-CSSCEEEEECEEEECBCCSCCCBCCCCSBCCSSCCCEEEEEECCCBSTTTEEEEEESSSSEEEEEECCBTT
T ss_pred CeEEEEEE-cCCccEEEEEEEEEecCCCCCEEecCCccccCCCCEEEEEEecCccCCCCcEEEEEECCEEeecccCCCCC
Confidence 57999985 33333333334444444433 344444568899999999999764 444 589999998775321
Q ss_pred -CCeeEEe--ecCCCCeEEEeeeCC--------------ccceeEEeecCCCCCCCccccCCcceeEecCCcEEEEEeee
Q psy2441 75 -NPRYNLL--TSGAPGTYIKIKPNL--------------FSPLSVYSADKIPPGFPQITEAPSTKVVEISHTTVLHCSAS 137 (212)
Q Consensus 75 -~~~~~~~--~~~~~g~~l~i~~~~--------------~~~~~v~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~ 137 (212)
...+.+. ..++++.|.|.+... ...+.|+.. |+..+.+.. + ..+.+|+.+.|.|.+.
T Consensus 140 ~~~~l~~~~~~~D~g~~~~C~A~~~l~~~g~~l~~~~s~~~~L~V~~~---P~~~~~~~~-p--~~l~eG~~v~l~C~~~ 213 (291)
T 1mq8_A 140 AEVTTTVLVRRDHHGANFSCRTELDLRPQGLELFENTSAPYQLQTFVL---PATPPQLVS-P--RVLEVDTQGTVVCSLD 213 (291)
T ss_dssp EEEEEECCCSSSCSSCEEEEEEEEECGGGTSCEEEECCCCEECBC-----------------------------------
T ss_pred ceEEEEeeeeeccCCceEEEEEEecCCccCCccccccccceEEEEEec---CCCCceecC-C--cCccCCCeEEEEEEcC
Confidence 0112211 124555788877642 112223221 111122221 2 2467899999999999
Q ss_pred eCCCC---ceEEEeCCEEecCCCCCceEEcCCCCceeEEEcCC---CCCC--CeeEEEEEEcccccceecceEEEEecce
Q psy2441 138 GNPPP---KISWIREMLPVDTSRNPRYNLLTSGAPGALQITNS---IEED--QGKYECVAENEVGTEYSPSTMLYVKGTQ 209 (212)
Q Consensus 138 ~~p~~---~i~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~---~~~d--~g~y~C~a~n~~g~~~~~~~~l~v~~~~ 209 (212)
+++++ .++|+++++.+... ...++ ..+.+... +.++ .+.|.|.|.|........ ..|.|..-+
T Consensus 214 g~~P~~~~~v~w~~~g~~l~~~------~~~~g--~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~-~~l~v~~~~ 284 (291)
T 1mq8_A 214 GLFPVSEAQVHLALGDQRLNPT------VTYGN--DSFSAKASVSVTAEDEGTQRLTCAVILGNQSQETL-QTVTIYSFP 284 (291)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCCCCcccEEEEEECCEecCce------eeecC--CeEEEEEecceeEcCCCCEEEEEEEEeCCcceEEE-EEEEEEcCC
Confidence 97554 69999999887653 11111 22333222 3433 567779888755445444 666666655
Q ss_pred ec
Q psy2441 210 VD 211 (212)
Q Consensus 210 ~p 211 (212)
.|
T Consensus 285 ~~ 286 (291)
T 1mq8_A 285 AP 286 (291)
T ss_dssp --
T ss_pred Cc
Confidence 55
No 257
>2xqy_G A13-D6.3 monoclonal antibody, envelope glycoprotein H; immune system-viral protein complex, envelope protein; HET: NAG; 2.05A {Mus musculus}
Probab=99.61 E-value=3.4e-15 Score=106.71 Aligned_cols=157 Identities=17% Similarity=0.289 Sum_probs=95.0
Q ss_pred eCCCccEEeeCCeEEEEcccCCCC--CCcEEEEeCC--EEe------cC---------CCCCeeEEeec-----------
Q psy2441 34 EAPSTKVVEISHTTVLHCSASGNP--PPKISWIREM--LPV------DT---------SRNPRYNLLTS----------- 83 (212)
Q Consensus 34 ~~~~~~~v~~g~~v~l~C~~~~~p--~~~v~W~k~g--~~l------~~---------~~~~~~~~~~~----------- 83 (212)
..|....+.+|++++|.|.+.+.+ .+.+.|||+. ..+ .. ....|+.+...
T Consensus 11 ~~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~ 90 (261)
T 2xqy_G 11 QQPGAELVKPGASVKMSCKASGYSFTSYWMNWVKQRPGRGLEWIGRIDPSDNETHYNQDFKDKVTLTVDKSSSTVYIQLS 90 (261)
T ss_dssp ECCSEEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTTCCEEECGGGTTTEEEEEEGGGTEEEEEEC
T ss_pred ECCCCEEEcCCCCEEEEEEeCCcccCCceEEEEEeCCCCCcEEEEEEecCCCceeeCCccCCcEEEEecCCCCEEEEEEc
Confidence 345677899999999999998766 5789999862 211 00 01245544321
Q ss_pred ----CCCCeEEEeeeCCc---------cceeEEeecCCCCCCCccccCCcceeEecCCcEEEEEeeeeC-CCC-ceEEEe
Q psy2441 84 ----GAPGTYIKIKPNLF---------SPLSVYSADKIPPGFPQITEAPSTKVVEISHTTVLHCSASGN-PPP-KISWIR 148 (212)
Q Consensus 84 ----~~~g~~l~i~~~~~---------~~~~v~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~-p~~-~i~W~~ 148 (212)
.|.|.|.|...... ..|.|.. ....+|.+........+..|+.+.|.|.+.+. |.+ .+.|++
T Consensus 91 ~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~L~V~~---~~~~~P~v~~~~p~~~v~~g~~v~L~C~~~g~~P~~i~v~W~k 167 (261)
T 2xqy_G 91 SLTSEDSAVYYCGRLGYVYGFDYWGQGTTLTVSS---AKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTWNS 167 (261)
T ss_dssp SCCGGGCEEEEEEEECTTSSEEEECCCEEEEECS---SCCBCCEEEEECCCCC--CCSEEEEEEEEEEEBSSCCEEEEGG
T ss_pred CCCcccCeEEEEEEecCCCcceEECCCEEEEEcc---CCCCCCeEEEeCCCccccCCCcEEEEEEEEeEeCCCCEEEEec
Confidence 37788888766521 1222221 11122444332222235679999999999874 766 999999
Q ss_pred CCEEecCCCCCceEEcCCCC---ceeEEEcCCCCCCCeeEEEEEEcccccc
Q psy2441 149 EMLPVDTSRNPRYNLLTSGA---PGALQITNSIEEDQGKYECVAENEVGTE 196 (212)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~---~~~l~i~~~~~~d~g~y~C~a~n~~g~~ 196 (212)
++..+......... .++. .+.|.|.+...+| |.|+|.|.|.....
T Consensus 168 ~g~~~~~~~~~~~~--~~g~~~~~s~L~i~~~~~~~-g~YtC~v~n~~~~~ 215 (261)
T 2xqy_G 168 GSLSSGVHTFPAVL--QSDLYTLSSSVTVTSSTWPS-QSITCNVAHPASST 215 (261)
T ss_dssp GTCCTTEEECCCEE--ETTEEEEEEEEEEETTTTTT-SCCEEEEEEGGGTE
T ss_pred CCCcCceEecCcee--cCCcEEEEEEEEEeccccCC-CEEEEEEEECCCCc
Confidence 88654211011111 1110 2578999888888 99999999976543
No 258
>1he7_A High affinity nerve growth factor receptor; transferase, TRK-receptor, strand-swapping; 2.0A {Homo sapiens} SCOP: b.1.1.4 PDB: 1wwa_X 1www_X
Probab=99.61 E-value=4e-15 Score=93.53 Aligned_cols=82 Identities=18% Similarity=0.323 Sum_probs=63.5
Q ss_pred cCCcEEEEEeeeeCCCCceEEEeCCEEecCCCCCceEEcC---CC--CceeEEEcCCCCCCCeeEEEEEEcccccceecc
Q psy2441 126 ISHTTVLHCSASGNPPPKISWIREMLPVDTSRNPRYNLLT---SG--APGALQITNSIEEDQGKYECVAENEVGTEYSPS 200 (212)
Q Consensus 126 ~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~---~~--~~~~l~i~~~~~~d~g~y~C~a~n~~g~~~~~~ 200 (212)
.+..+.|.|.+.|+|.|.|.|++||..+............ +. ..+.|.|.++...|+|.|+|.|.|..|.....
T Consensus 14 ~~~~~~l~c~v~G~P~P~I~W~knG~~l~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~YtC~A~N~~G~~~~t- 92 (126)
T 1he7_A 14 EMHHWCIPFSVDGQPAPSLRWLFNGSVLNETSFIFTEFLEPAANETVRHGCLRLNQPTHVNNGNYTLLAANPFGQASAS- 92 (126)
T ss_dssp CCCEEEEEEEECCSSCCEEEEEETTEECCCCSSEEEEEECCCSSCCCEEEEEEEESCCGGGCEEEEEEEEETTEEEEEE-
T ss_pred cCccEEEEEEEeeeCCCeEEEEECCEECCCCCceeEEEeeccccccccceEEEECcCCCCCCEEEEEEEEECCCeEEEE-
Confidence 5778999999999999999999999998875222222221 11 13689999999999999999999999998765
Q ss_pred eEEEEecc
Q psy2441 201 TMLYVKGT 208 (212)
Q Consensus 201 ~~l~v~~~ 208 (212)
+.|.|...
T Consensus 93 ~~l~v~~~ 100 (126)
T 1he7_A 93 IMAAFMDN 100 (126)
T ss_dssp EEECCCSC
T ss_pred EEEEEEcC
Confidence 66655544
No 259
>2edk_A Myosin-binding protein C, fast-type; IG fold, fast MYBP-C, C-protein, skeletal muscle fast- isoform, MYBPCF, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.61 E-value=2.1e-15 Score=92.15 Aligned_cols=91 Identities=15% Similarity=0.305 Sum_probs=71.8
Q ss_pred CCccccCCcceeEecCCcEEEEEeeeeCCCCceEEEeCCEEecCCCCC--ceEEcCCCCceeEEEcCCCCCCCeeEEEEE
Q psy2441 112 FPQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREMLPVDTSRNP--RYNLLTSGAPGALQITNSIEEDQGKYECVA 189 (212)
Q Consensus 112 ~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~~~--~~~~~~~~~~~~l~i~~~~~~d~g~y~C~a 189 (212)
+|.+...+....+.+|+.+.|.|.+.+.| +.+.|++++..+...... ++.+..++....|.|.++..+|+|.|.|.|
T Consensus 8 p~~~~~~~~~~~v~~G~~v~l~C~~~~~~-~~v~W~k~g~~i~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a 86 (101)
T 2edk_A 8 PVLIVTPLEDQQVFVGDRVEMAVEVSEEG-AQVMWMKNGVELTREDSFKARYRFKKDGKRHILIFSDVVQEDRGRYQVIT 86 (101)
T ss_dssp CCCEEECCCCEEEESSCCCBCCEEESCSS-CCCEEEESSCBCCCSCCSSCCCEEEECSSEEEEECSSCCGGGCSBEEEEC
T ss_pred CCEEEecCCceEEcCCCCEEEEEEEeCCC-CEEEEEECCEECCCCCCcceeEEEEECCCEEEEEECCCChhhCEEEEEEE
Confidence 46777777778899999999999999988 999999999888765322 555555554568999999999999999999
Q ss_pred EcccccceecceEEEEecc
Q psy2441 190 ENEVGTEYSPSTMLYVKGT 208 (212)
Q Consensus 190 ~n~~g~~~~~~~~l~v~~~ 208 (212)
.|. ... +.|.|+++
T Consensus 87 ~n~----~~~-~~l~V~~~ 100 (101)
T 2edk_A 87 NGG----QCE-AELIVEEK 100 (101)
T ss_dssp SSC----EEC-CBEEEECC
T ss_pred cCC----cEE-EEEEEeCC
Confidence 872 223 56666654
No 260
>2edn_A Myosin-binding protein C, fast-type; beta-sandwich, IG-fold, fast MYBP-C, C-protein, skeletal muscle fast isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.60 E-value=6.3e-15 Score=91.71 Aligned_cols=95 Identities=16% Similarity=0.284 Sum_probs=71.2
Q ss_pred CccccCCcceeEecCCcEEEEEeeeeC---CCCceEEEeCCE-EecCCCCCceEEcC--CC----CceeEEEcCCCCCCC
Q psy2441 113 PQITEAPSTKVVEISHTTVLHCSASGN---PPPKISWIREML-PVDTSRNPRYNLLT--SG----APGALQITNSIEEDQ 182 (212)
Q Consensus 113 p~~~~~~~~~~~~~g~~~~l~C~~~~~---p~~~i~W~~~~~-~~~~~~~~~~~~~~--~~----~~~~l~i~~~~~~d~ 182 (212)
+.|...|....+.+|+++.|.|.+.+. |.|.|.|+|+.. .+......++.+.. .. ....|.|.+++..|+
T Consensus 13 ~~f~~~P~~v~V~eG~~v~L~C~v~g~~~~p~P~V~W~Kgk~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~ 92 (118)
T 2edn_A 13 GVFLKKPDSVSVETGKDAVVVAKVNGKELPDKPTIKWFKGKWLELGSKSGARFSFKESHNSASNVYTVELHIGKVVLGDR 92 (118)
T ss_dssp SSCSBCCCCCEEETTSCEECCEEEETTTSSSCCCCEEEETTTCCCCCSTTSSCEEEEEECSSSCEEEEEEEESSCCTTTC
T ss_pred ceEEECCCCeEEeCCCCEEEEEEEeccCCCCCCcEEEeeCCEeccCCCCccEEEeccccccccccceEEEEEeeCChhhC
Confidence 566677888889999999999999875 789999999741 22211122333211 10 137899999999999
Q ss_pred eeEEEEEEcccccceecceEEEEecc
Q psy2441 183 GKYECVAENEVGTEYSPSTMLYVKGT 208 (212)
Q Consensus 183 g~y~C~a~n~~g~~~~~~~~l~v~~~ 208 (212)
|.|.|.|.|..|..... +.|.|+++
T Consensus 93 G~Y~Cevsn~~g~~s~~-~~L~V~~~ 117 (118)
T 2edn_A 93 GYYRLEVKAKDTCDSCG-FNIDVEAP 117 (118)
T ss_dssp SCEEEEEECSSCEEEEE-ECCEEECC
T ss_pred EEEEEEEEEcCCcEEEE-EEEEEEcC
Confidence 99999999999987767 88888774
No 261
>2dlt_A Myosin binding protein C, fast-type; IG-like domain, mybpc2, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.60 E-value=3.5e-15 Score=91.95 Aligned_cols=90 Identities=19% Similarity=0.249 Sum_probs=71.8
Q ss_pred CCccccCCcceeEecCCcEEEEEeeeeCCCCceEEEeCCEEecCCCCCceEEcCCCCceeEEEcCCCCCCCeeEEEEEEc
Q psy2441 112 FPQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREMLPVDTSRNPRYNLLTSGAPGALQITNSIEEDQGKYECVAEN 191 (212)
Q Consensus 112 ~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~n 191 (212)
+|.+...+....+.+|+.+.|.|.+.+.|.+ +.|++++..+... .++.+..++....|.|.++..+|+|.|.|.|.|
T Consensus 8 ~p~~~~~~~~~~v~~G~~v~l~C~~~~~~~~-v~W~k~g~~~~~~--~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n 84 (106)
T 2dlt_A 8 QLEVLQDIADLTVKAAEQAVFKCEVSDEKVT-GKWYKNGVEVRPS--KRITISHVGRFHKLVIDDVRPEDEGDYTFVPDG 84 (106)
T ss_dssp CCCEEECCCCEEEESSCCEECCCEESCSSCE-EEEEESSCBCCCC--SSCEEEEETTEEEEEESSCCTTTCSCEEEEEET
T ss_pred CCEEecCCCCeEEeCCCeEEEEEEEcCCCcc-eEEEcCCEECcCC--CCEEEEEeCCEEEEEECCCCcCCCEEEEEEEcc
Confidence 4777778888899999999999999998887 9999999888764 455555444446899999999999999999999
Q ss_pred ccccceecceEEEEec
Q psy2441 192 EVGTEYSPSTMLYVKG 207 (212)
Q Consensus 192 ~~g~~~~~~~~l~v~~ 207 (212)
. ..... +.|.|..
T Consensus 85 ~--~~~~~-~~l~V~~ 97 (106)
T 2dlt_A 85 Y--ALSLS-AKLNFLE 97 (106)
T ss_dssp S--CCCCC-BCEEEEC
T ss_pred C--CceEE-EEEEEEE
Confidence 8 33333 5566554
No 262
>2lvc_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=99.60 E-value=3.2e-15 Score=89.28 Aligned_cols=77 Identities=21% Similarity=0.363 Sum_probs=60.4
Q ss_pred CccccCCcce--eEecCCcEEEEEeeeeCCCCceEEEeCCEEecCCCCCceEEcCCCCceeEEEcCCCCCCCeeEEEEEE
Q psy2441 113 PQITEAPSTK--VVEISHTTVLHCSASGNPPPKISWIREMLPVDTSRNPRYNLLTSGAPGALQITNSIEEDQGKYECVAE 190 (212)
Q Consensus 113 p~~~~~~~~~--~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~ 190 (212)
+.+..+.... .+.+|+.+.|.|.+.+ |.+.+.|++||..+... .++.+..++....|.|.++..+|+|.|.|.|.
T Consensus 5 ~~i~~p~~~~~v~~~~g~~v~l~C~v~~-p~~~v~W~k~g~~i~~~--~~~~i~~~~~~~~L~I~~v~~~D~G~Y~C~a~ 81 (91)
T 2lvc_A 5 VHIVDPREHVFVHAITSECVMLACEVDR-EDAPVRWYKDGQEVEES--DFVVLENEGPHRRLVLPATQPSDGGEFQCVAG 81 (91)
T ss_dssp CCCCBCCSCEEEECCTTCCEEEEEECSC-TTSCCEEEETTSCCCCC--SSCEEEEETTEEEEEESSCCGGGCSEEEEECS
T ss_pred cEEeccCCCeEEEEECCCcEEEEEEECC-CCcEEEEEECCEEeeee--eeeeEEecCCeEEEEeCCCChhhcEEEEEEEc
Confidence 4444444443 4467999999999965 78899999999988875 55655555555789999999999999999997
Q ss_pred cc
Q psy2441 191 NE 192 (212)
Q Consensus 191 n~ 192 (212)
|.
T Consensus 82 n~ 83 (91)
T 2lvc_A 82 DE 83 (91)
T ss_dssp SC
T ss_pred ce
Confidence 75
No 263
>2eny_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.60 E-value=6e-15 Score=90.57 Aligned_cols=92 Identities=18% Similarity=0.176 Sum_probs=72.9
Q ss_pred CCccccCCcceeEecCCcEEEEEeeeeCCC-CceEEEeCCEEecCCCCCceEEcCCCCceeEEEcCCCCCCCeeEEEEEE
Q psy2441 112 FPQITEAPSTKVVEISHTTVLHCSASGNPP-PKISWIREMLPVDTSRNPRYNLLTSGAPGALQITNSIEEDQGKYECVAE 190 (212)
Q Consensus 112 ~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~-~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~ 190 (212)
++.|...+....+.+|+.+.|.|.+.+.|. +.+.|++++..+... .++....++...+|.|.++..+|+|.|.|.|.
T Consensus 8 p~~~~~~~~~~~v~~G~~v~l~C~v~~~~~~~~v~W~k~g~~i~~~--~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~ 85 (104)
T 2eny_A 8 HVGITKRLKTMEVLEGESCSFECVLSHESASDPAMWTVGGKTVGSS--SRFQATRQGRKYILVVREAAPSDAGEVVFSVR 85 (104)
T ss_dssp CCCCSBCCCCEEEESSCCEEEEEECSSCCCSSCBCCBSSSSBCSBC--SSCEEEEETTEEEEEECSCCTTTCSCEEEEET
T ss_pred CCEEEecCCCcEEcCCCcEEEEEEEcCCCCCceeEEEECCEECCCC--CCEEEEEcCCEEEEEECCCCHHHCEEEEEEEC
Confidence 366777778889999999999999988875 489999999888765 45555555445689999999999999999986
Q ss_pred cccccceecceEEEEeccee
Q psy2441 191 NEVGTEYSPSTMLYVKGTQV 210 (212)
Q Consensus 191 n~~g~~~~~~~~l~v~~~~~ 210 (212)
|. ... +.|.|++++.
T Consensus 86 ~~----~~~-a~L~V~~~p~ 100 (104)
T 2eny_A 86 GL----TSK-ASLIVRERSG 100 (104)
T ss_dssp TE----EEE-ECEEEECCCS
T ss_pred Ce----eEE-EEEEEeCCCc
Confidence 53 344 7777877654
No 264
>2k1m_A Myosin-binding protein C, cardiac-type; IG-I domain, cardiac muscle, hypertrophic cardiomyopathy, actin-binding, cell adhesion, disease mutation; NMR {Homo sapiens}
Probab=99.59 E-value=2.3e-14 Score=86.49 Aligned_cols=86 Identities=23% Similarity=0.354 Sum_probs=68.9
Q ss_pred CccccCCcceeEecCCcEEEEEeeeeCCCCceEEEeCCEEecCCCCCceEEcCCCCceeEEEcCCCCCCCeeEEEEEEcc
Q psy2441 113 PQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREMLPVDTSRNPRYNLLTSGAPGALQITNSIEEDQGKYECVAENE 192 (212)
Q Consensus 113 p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~n~ 192 (212)
+.|...+....+.+|+.+.|.|.+ +.|.+.+.|++++..+... .++....++....|.|.++..+|+|.|.|.|
T Consensus 9 ~~~~~~~~~~~v~~G~~v~l~C~~-~~p~~~v~W~k~~~~l~~~--~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a--- 82 (95)
T 2k1m_A 9 SAFSKKPRSVEVAAGSPAVFEAET-ERAGVKVRWQRGGSDISAS--NKYGLATEGTRHTLTVREVGPADQGSYAVIA--- 82 (95)
T ss_dssp CCCSBCCCCEEEETTSCEEEEEEC-SSSSCCCEEECSSSEECSS--TTCEEEEETTEEEEEESSCCTTCCSEEEEEE---
T ss_pred CeeEeCCCcEEEeCCCcEEEEEEe-CCCCCeEEEEECCEECCCC--CcEEEEEcCCEEEEEEcCCCcccCEEEEEEE---
Confidence 566677778889999999999999 7888999999999888764 4555544444468999999999999999999
Q ss_pred cccceecceEEEEe
Q psy2441 193 VGTEYSPSTMLYVK 206 (212)
Q Consensus 193 ~g~~~~~~~~l~v~ 206 (212)
|..... +.|.|+
T Consensus 83 -g~~~~~-~~l~V~ 94 (95)
T 2k1m_A 83 -GSSKVK-FDLKVI 94 (95)
T ss_dssp -TTEEEE-EEEEEE
T ss_pred -CCceEE-EEEEEe
Confidence 444444 677665
No 265
>2v9t_A Roundabout homolog 1; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens}
Probab=99.59 E-value=4.8e-15 Score=93.02 Aligned_cols=94 Identities=34% Similarity=0.554 Sum_probs=71.2
Q ss_pred CCccccCCcceeEecCCcEEEEEeeeeCCCCceEEEeCCEEecCCC---CCceEEcCCCCceeEEEc-----CCCCCCCe
Q psy2441 112 FPQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREMLPVDTSR---NPRYNLLTSGAPGALQIT-----NSIEEDQG 183 (212)
Q Consensus 112 ~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~---~~~~~~~~~~~~~~l~i~-----~~~~~d~g 183 (212)
+|.+...+....+.+|+.+.|.|.+.|.|.|.+.|++++..+.... ..+.....+ +.+.+. +++.+|+|
T Consensus 9 pP~i~~~p~~~~v~~G~~v~L~C~~~g~P~p~v~W~k~~~~~~~~~~~~~~~~~~~~~---~~~~~~~i~~~~v~~~D~G 85 (117)
T 2v9t_A 9 PPRIVEHPSDLIVSKGEPATLNCKAEGRPTPTIEWYKGGERVETDKDDPRSHRMLLPS---GSLFFLRIVHGRKSRPDEG 85 (117)
T ss_dssp EEEEEECCCCEEECTTCCEEECCEEEEESCCEEEEEETTEECCCTTTCSSCSEEECTT---SCEEESSCCCBTTBCSSCE
T ss_pred CCeeEcCCCCEEEcCCCcEEEEEECCccCCCeEEEEECCEeccccCCCCcceeEEecC---CcEEEEEEEeCCCCcCcCE
Confidence 3777777778889999999999999999999999999998887541 112223333 233333 55789999
Q ss_pred eEEEEEEcccccceecceEEEEecc
Q psy2441 184 KYECVAENEVGTEYSPSTMLYVKGT 208 (212)
Q Consensus 184 ~y~C~a~n~~g~~~~~~~~l~v~~~ 208 (212)
.|.|.|.|..|......+.+.+...
T Consensus 86 ~Y~C~a~N~~G~~~s~~~~l~~~~~ 110 (117)
T 2v9t_A 86 VYVCVARNYLGEAVSHDASLEVAAA 110 (117)
T ss_dssp EEEEEEEETTEEEECCCEEEEEC--
T ss_pred EEEEEEEeCccceEeeeEEEEhhhh
Confidence 9999999999999887678777543
No 266
>2ens_A Advanced glycosylation END product-specific receptor; beta-sandwich, C2-SET, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.59 E-value=3.2e-15 Score=90.44 Aligned_cols=86 Identities=23% Similarity=0.414 Sum_probs=67.5
Q ss_pred CCCCccccCCcceeEecCCcEEEEEeeeeCCCCceEEEeCCEEecCCCCCceEEcCCCCceeEEEcCCCCCCCeeEEEEE
Q psy2441 110 PGFPQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREMLPVDTSRNPRYNLLTSGAPGALQITNSIEEDQGKYECVA 189 (212)
Q Consensus 110 ~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~a 189 (212)
+..|.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+... .+ ..|.|.++..+|+|.|.|.|
T Consensus 8 ~~~~~i~~~p~~~~v~~G~~v~l~C~~~g~p~~~v~W~k~~~~~~~~--------~~---~~L~i~~v~~~d~G~Y~C~a 76 (96)
T 2ens_A 8 LEEVQLVVEPEGGAVAPGGTVTLTCEVPAQPSPQIHWMKDGVPLPLP--------PS---PVLILPEIGPQDQGTYSCVA 76 (96)
T ss_dssp CCSCCCEEESTTSEECTTCEEEEECCCSSCSSCCCCCEESSSBCSSC--------CC---SEEEEESCCTTTCEEEECEE
T ss_pred CCCCEEEECCCCCEEcCCCeEEEEEEEccCCCCEEEEEECCEECcCC--------CC---CEEEECCCCcccCEEEEEEE
Confidence 34467777777778999999999999999999999999998776543 12 68999999999999999999
Q ss_pred Eccccccee-cceEEEEe
Q psy2441 190 ENEVGTEYS-PSTMLYVK 206 (212)
Q Consensus 190 ~n~~g~~~~-~~~~l~v~ 206 (212)
.|..|.... ..+.|.|.
T Consensus 77 ~n~~~~~~~s~~~~v~V~ 94 (96)
T 2ens_A 77 THSSHGPQESRAVSISII 94 (96)
T ss_dssp CCSSCCCEECCCEEEEEC
T ss_pred EeCCCCcEEEEEEEEEEe
Confidence 996554333 32555544
No 267
>3to4_D NKT vbeta2 (mouse variable domain, human constant; mouse CD1D, mouse NKT, immune system; HET: AGH NAG; 3.10A {Homo sapiens}
Probab=99.59 E-value=2.9e-14 Score=101.40 Aligned_cols=160 Identities=18% Similarity=0.258 Sum_probs=94.4
Q ss_pred EeCCCccEEeeCCeEEEEcccCCCCCCcEEEEeCC--EE---ec---CC-------CCC-ee----------EEeec--C
Q psy2441 33 TEAPSTKVVEISHTTVLHCSASGNPPPKISWIREM--LP---VD---TS-------RNP-RY----------NLLTS--G 84 (212)
Q Consensus 33 ~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~k~g--~~---l~---~~-------~~~-~~----------~~~~~--~ 84 (212)
...|..+.+.+|++++|.|.+.+.+.+.+.|||.. .. +. .. ... |+ .|... .
T Consensus 5 ~q~p~~v~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~L~I~~v~~~ 84 (253)
T 3to4_D 5 EQNPRWRLVPRGQAVNLRCILKNSQYPWMSWYQQDLQKQLQWLFTLRSPGDKEVKSLPGADYLATRVTDTELRLQVANMS 84 (253)
T ss_dssp EEECSEEEEESSCCEEEEEECSCTTCCCEEEEEEETTCCEEEEEEECSTTCEEEEEETTEEEEEECCSSSCCEEEEESCS
T ss_pred EeCCCeEEEeCCCcEEEEEEeCCCCcceEEEEEECCCCCcEEEEEECCCcceecCCccCCcEEEEeCCCCeEEEccCChh
Confidence 34566788999999999999988888899999821 10 00 00 001 33 33322 4
Q ss_pred CCCeEEEeeeCCc------------cceeEEeecCCCCCCCccccC-CcceeEecCCcEEEEEeeee-CCCC-ceEEEeC
Q psy2441 85 APGTYIKIKPNLF------------SPLSVYSADKIPPGFPQITEA-PSTKVVEISHTTVLHCSASG-NPPP-KISWIRE 149 (212)
Q Consensus 85 ~~g~~l~i~~~~~------------~~~~v~~~~~~~~~~p~~~~~-~~~~~~~~g~~~~l~C~~~~-~p~~-~i~W~~~ 149 (212)
|.|.|.|...... ..+.|..... ...+|.+... +....+..|+.+.|.|.+.+ .|.+ .+.|+++
T Consensus 85 DsG~Y~C~~~~~~~~~~~~~~~~~~t~l~V~~~~~-~~~~P~v~~~~~~~~~~~~g~~~~L~C~~~g~~P~~i~v~W~k~ 163 (253)
T 3to4_D 85 QGRTLYCTSSADHWTNTGQLYFGEGSKLTVLEDLK-NVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWVN 163 (253)
T ss_dssp SCEEEEEEEECSCCSTTCCEEECCCEEEEEESCST-TCBCCEEEEEECCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEET
T ss_pred hCeEEEEEEecCCCCcccceEECCCEEEEEecCCC-CCCCCeEEEeCCChhhcccCCceEEEEEEceEECCcEEEEEEEC
Confidence 8888888775321 1333332100 1112333322 12222335789999999988 6666 8999999
Q ss_pred CEEecCCCCCc-eEEc-----CCCC---ceeEEEcCCCCCC-CeeEEEEEEccc
Q psy2441 150 MLPVDTSRNPR-YNLL-----TSGA---PGALQITNSIEED-QGKYECVAENEV 193 (212)
Q Consensus 150 ~~~~~~~~~~~-~~~~-----~~~~---~~~l~i~~~~~~d-~g~y~C~a~n~~ 193 (212)
+..+....... .... .++. .+.|.|.....+| .|.|+|.|.|..
T Consensus 164 g~~l~~~~~~~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~~~~ytC~v~h~~ 217 (253)
T 3to4_D 164 GKEVHSGVSTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYG 217 (253)
T ss_dssp TEEECTTEEECSSCEESSTTCTTCCEEEEEEEEEEHHHHTCTTCEEEEEEEECC
T ss_pred CEECCCceecccccccccccCCCCCEEEEEEEEECHHHhccCCCEEEEEEEeCC
Confidence 99886530000 0000 1111 1467777776667 779999999864
No 268
>3bae_H WO2 IGG2A FAB fragment heavy chain; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} SCOP: b.1.1.2 PDB: 3bkc_H 3bkj_H 3bkm_H 3mck_H 2r0w_H* 2iqa_H 2iq9_H 1ggi_H 1ggb_H 1ggc_H 3eys_H* 2ipt_H 2ipu_H 3eyu_H* 2r0z_H* 3rkd_H 1r0a_H* 1n5y_H* 1n6q_H* 1t03_H* ...
Probab=99.59 E-value=1.1e-14 Score=102.04 Aligned_cols=157 Identities=20% Similarity=0.301 Sum_probs=94.5
Q ss_pred CCccEEeeCCeEEEEcccCCCCC----CcEEEEeCC--EEe---c-----------CCCCCeeEEeec------------
Q psy2441 36 PSTKVVEISHTTVLHCSASGNPP----PKISWIREM--LPV---D-----------TSRNPRYNLLTS------------ 83 (212)
Q Consensus 36 ~~~~~v~~g~~v~l~C~~~~~p~----~~v~W~k~g--~~l---~-----------~~~~~~~~~~~~------------ 83 (212)
|....+.+|++++|.|.+.+.|. +.+.|||+. ..+ . .....|+.+...
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~ 86 (228)
T 3bae_H 7 SGPGLLKPSQTLSLTCSFSGFSIRTSKVGVSWIRQPSGKGLEWLAHIYWDDDKRYNPSLESRLTISKDTSRDMVFMKITS 86 (228)
T ss_dssp ECCSEECTTCCEEEEEEEESSCHHHHCCEEEEEEEETTCCCEEEEEECTTSCEEECTTTGGGEEEEEETTTTEEEEEECS
T ss_pred CCceeecCCCeEEEEEEEeCcccCCCceeEEEEEECCCCCeEEEEEEecCCceeeCcccCCcEEEEEcCCCCeEEEEEcC
Confidence 56678999999999999988764 789999852 211 0 011245544321
Q ss_pred ---CCCCeEEEeeeCCc---------------cceeEEeecCCCCCCCccccCCcceeEecCCcEEEEEeeeeC-CCC-c
Q psy2441 84 ---GAPGTYIKIKPNLF---------------SPLSVYSADKIPPGFPQITEAPSTKVVEISHTTVLHCSASGN-PPP-K 143 (212)
Q Consensus 84 ---~~~g~~l~i~~~~~---------------~~~~v~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~-p~~-~ 143 (212)
.|.|.|.|...... ..+.|.. ..+.+|.+...+....+.+|+.+.|.|.+.+. |.+ .
T Consensus 87 v~~~D~G~Y~C~~~~~~g~~~~~~~~~~~~~~~~L~V~~---~~~~~P~i~~~~~~~~~~~g~~~~l~C~~~g~~P~p~~ 163 (228)
T 3bae_H 87 VDTADTATYYCARRGFYGRKYEVNHFDYWGQGTTLTVSS---AKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVT 163 (228)
T ss_dssp CCGGGCEEEEEEEEEESTTCTTSEEEEEECCCEEEEECS---CCCBCCEEEEECC-----CCSEEEEEEEEEEEBSSCCE
T ss_pred CCcccCEEEEEEEecCCCccccccceeeeCCcEEEEecC---CCCCCCEEEEecccccccCCCCEEEEEEEccEeCCCEE
Confidence 37778887765421 1222221 12223444433222335679999999999886 777 9
Q ss_pred eEEEeCCEEecCCCCCceEEcCCC---CceeEEEcCCCCCCCeeEEEEEEccccccee
Q psy2441 144 ISWIREMLPVDTSRNPRYNLLTSG---APGALQITNSIEEDQGKYECVAENEVGTEYS 198 (212)
Q Consensus 144 i~W~~~~~~~~~~~~~~~~~~~~~---~~~~l~i~~~~~~d~g~y~C~a~n~~g~~~~ 198 (212)
+.|++++..+.......+. .++ ..+.|.|.+...++ |.|+|.|.|..|....
T Consensus 164 v~W~~~~~~~~~~~~~~~~--~~~~~~~~s~L~i~~~~~d~-g~YtC~~~n~~~~~~~ 218 (228)
T 3bae_H 164 LTWNSGSLSSGVHTFPAVL--QSDLYTLSSSVTVTSSTWPS-ESITCNVAHPASSTKV 218 (228)
T ss_dssp EEEGGGTCCTTEEEEEEEE--ETTEEEEEEEEEEETTTTTT-SCCEEEEEEGGGTEEE
T ss_pred EEEeeCCcccCceEcCcee--CCCcEEEEEEEEEEhhhcCC-CcEEEEEEECCCCCCE
Confidence 9999987643211001110 111 02578998888866 9999999999886643
No 269
>3o3u_N Maltose-binding periplasmic protein, advanced Gly END product-specific receptor; RAGE, AGER, scavenger receptor; HET: MLR; 1.50A {Escherichia coli} PDB: 3s59_A 3s58_A 3cjj_A 2l7u_A* 2e5e_A
Probab=99.59 E-value=1.7e-14 Score=114.20 Aligned_cols=157 Identities=18% Similarity=0.278 Sum_probs=99.1
Q ss_pred CccEEeeCCeEEEEccc-CCCCCCcEEEEeCCEEecC--------------C----CCCeeEEeec--CCCCeEEEeeeC
Q psy2441 37 STKVVEISHTTVLHCSA-SGNPPPKISWIREMLPVDT--------------S----RNPRYNLLTS--GAPGTYIKIKPN 95 (212)
Q Consensus 37 ~~~~v~~g~~v~l~C~~-~~~p~~~v~W~k~g~~l~~--------------~----~~~~~~~~~~--~~~g~~l~i~~~ 95 (212)
....+.+|+.++|.|.+ .+.|.+.|.|||++..+.. . .+..+.+... .|.|.|.|....
T Consensus 374 ~~~~~~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~L~i~~v~~~D~G~Y~C~~~n 453 (581)
T 3o3u_N 374 QNITARIGEPLVLKCKGAPKKPPQRLEWKLNTGRTEAWKVLSPQGGGPWDSVARVLPNGSLFLPAVGIQDEGIFRCQAMN 453 (581)
T ss_dssp EEEEEETTSCEEECCTTCCSSSSCEEEEEEEETTSSSCEECCSCCSSGGGGTSEECTTSCEEESSCCGGGCEEEEEEEEC
T ss_pred cccceecCCcEEEeeeecCCCCCceEEEEEcCCeeEEEEecccCCCCCcCCcEEEcCCceEEEeccccccCeEEEEEEEc
Confidence 34678899999999999 7888899999998752210 0 0122333332 488999998776
Q ss_pred Cccc---eeEEeecCCCCCCCccccCCcceeEecCCcE-EEEEeeee-CCCCceEEEeCCEEecCCCCCceEE----c--
Q psy2441 96 LFSP---LSVYSADKIPPGFPQITEAPSTKVVEISHTT-VLHCSASG-NPPPKISWIREMLPVDTSRNPRYNL----L-- 164 (212)
Q Consensus 96 ~~~~---~~v~~~~~~~~~~p~~~~~~~~~~~~~g~~~-~l~C~~~~-~p~~~i~W~~~~~~~~~~~~~~~~~----~-- 164 (212)
.... ..+...+..++..|.+..... .+..|+.. .|.|.+.+ +|.|.+.|++++..+... ..++.. .
T Consensus 454 ~~~~~~~~~~~l~V~~~~~~p~i~~~~~--~~~~~~~~~~l~C~~~~~~P~~~i~W~~~g~~l~~~-~~~~~~~~~~~~~ 530 (581)
T 3o3u_N 454 RNGKETKSNYRVRVYQIPGKPEIVDSAS--ELTAGVPNKVGTCVSEGSYPAGTLSWHLDGKPLVPN-EKGVSVKEQTRRH 530 (581)
T ss_dssp TTSCEEEEEEEEEEEBCCCCCEEESCCS--EECTTSCEEEEEEEEEEEBSCCEEEEEETTEECCTT-STTEEEEEEEEEC
T ss_pred CCCceeEEEEEEEEEcCCCCCEEEcCCc--ccccCCceeEEEEECCCCCCCCeEEEEECCEECCCC-CCeEEEEeeeEEc
Confidence 2221 122222222233344433322 24455555 66999988 699999999999988754 222211 1
Q ss_pred -CCCC---ceeEEEcCCCCCC-CeeEEEEEEcccccc
Q psy2441 165 -TSGA---PGALQITNSIEED-QGKYECVAENEVGTE 196 (212)
Q Consensus 165 -~~~~---~~~l~i~~~~~~d-~g~y~C~a~n~~g~~ 196 (212)
.++. .++|.|.++..+| .+.|+|.|.|..+..
T Consensus 531 ~~~g~y~~~s~L~i~~~~~~d~~~~y~C~~~n~~~~~ 567 (581)
T 3o3u_N 531 PETGLFTLQSELMVTPARGGDPRPTFSCSFSPGLPRH 567 (581)
T ss_dssp TTTCCEEEEEEEEECCCTTSCSCCCEEEEEECSSCSS
T ss_pred CCCceEEEEEEEEEEeccccCCCceEEEEEeccCCCC
Confidence 1111 4679999988544 889999999986443
No 270
>2e7b_A Obscurin; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yz8_A
Probab=99.58 E-value=2.2e-14 Score=87.86 Aligned_cols=91 Identities=23% Similarity=0.337 Sum_probs=73.9
Q ss_pred CCccccCCcceeEecCCcEEEEEeeeeCCCCceEEEeCCEEecCCCCCceEEcCCCCceeEEEcCCCCCCCeeEEEEEEc
Q psy2441 112 FPQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREMLPVDTSRNPRYNLLTSGAPGALQITNSIEEDQGKYECVAEN 191 (212)
Q Consensus 112 ~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~n 191 (212)
+|.+...+....+.+|+.+.|.|.+.+.|.+ +.|++++..+... .++....++....|.|.+++.+|+|.|.|.
T Consensus 8 pp~~~~~~~~~~v~~G~~v~l~C~~~~~p~~-v~W~k~~~~l~~~--~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~--- 81 (103)
T 2e7b_A 8 PVRFQEALKDLEVLEGGAATLRCVLSSVAAP-VKWCYGNNVLRPG--DKYSLRQEGAMLELVVRNLRPQDSGRYSCS--- 81 (103)
T ss_dssp CCCCTBCCCCEEEESSSCEEEEEECSSCCCS-CEEEESSSBCCCS--SSEEEEECSSEEEEEECSCCTTTCCCEEEE---
T ss_pred CCEEEecCccEEEECCCcEEEEEEEeCCCCC-eEEEECCEECCCC--CcEEEEEcCCEEEEEEccCCcccCEEEEEE---
Confidence 4777777788889999999999999999988 9999999887654 566666665456799999999999999998
Q ss_pred ccccceecceEEEEeccee
Q psy2441 192 EVGTEYSPSTMLYVKGTQV 210 (212)
Q Consensus 192 ~~g~~~~~~~~l~v~~~~~ 210 (212)
.|..... +.|.|.+.+.
T Consensus 82 -~g~~~~~-~~l~V~~~p~ 98 (103)
T 2e7b_A 82 -FGDQTTS-ATLTVTALPS 98 (103)
T ss_dssp -CSSCBCC-BCEEEECCCC
T ss_pred -ECCcEEE-EEEEEEeccc
Confidence 4555555 7788877654
No 271
>2dku_A KIAA1556 protein; beta-sandwich, IG-fold, obscurin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.58 E-value=3.3e-14 Score=87.05 Aligned_cols=92 Identities=24% Similarity=0.386 Sum_probs=75.2
Q ss_pred CCccccCCcceeEecCCcEEEEEeeeeCCCCceEEEeCCEEecCCCCCceEEcCCCCceeEEEcCCCCCCCeeEEEEEEc
Q psy2441 112 FPQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREMLPVDTSRNPRYNLLTSGAPGALQITNSIEEDQGKYECVAEN 191 (212)
Q Consensus 112 ~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~n 191 (212)
+|.|...+....+.+|+.+.|.|.+ +.|.+.+.|++++..+... .++.+..++....|.|.++..+|+|.|.|.
T Consensus 8 pp~~~~~~~~~~v~~G~~v~l~C~~-~~p~~~v~W~k~~~~l~~~--~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~--- 81 (103)
T 2dku_A 8 ANCFTEELTNLQVEEKGTAVFTCKT-EHPAATVTWRKGLLELRAS--GKHQPSQEGLTLRLTISALEKADSDTYTCD--- 81 (103)
T ss_dssp CCCCSSCCCCEEEETTSEEEEEEEC-SSCCSCCEEEESSCBCCSS--SSEEEEEETTEEEEEEESCCTTTCSEEEEE---
T ss_pred CCEeEecCCcEEEeCCCcEEEEEEe-CCCCCeEEEEeCCEECCCC--CeEEEEeCCCEEEEEECCCCcccCEEEEEE---
Confidence 4777777888899999999999994 8888999999999888764 456555454345899999999999999997
Q ss_pred ccccceecceEEEEecceec
Q psy2441 192 EVGTEYSPSTMLYVKGTQVD 211 (212)
Q Consensus 192 ~~g~~~~~~~~l~v~~~~~p 211 (212)
.|..... +.|.|.+.+.|
T Consensus 82 -~g~~~~~-~~l~V~~~p~~ 99 (103)
T 2dku_A 82 -IGQAQSR-AQLLVQGRRSG 99 (103)
T ss_dssp -CSSCBCC-EEEEEECSCCC
T ss_pred -eCCceEE-EEEEEeCccCC
Confidence 5666666 88888887665
No 272
>3nl4_H Antigen binding fragment,immunoglobulin IGG - HEA; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_H
Probab=99.58 E-value=1.2e-14 Score=100.80 Aligned_cols=158 Identities=17% Similarity=0.243 Sum_probs=86.7
Q ss_pred eCCCccEEeeCCeEEEEcccCCC--CCCcEEEEeCC-----EEe---cC--------CCCCeeEEe-----------ec-
Q psy2441 34 EAPSTKVVEISHTTVLHCSASGN--PPPKISWIREM-----LPV---DT--------SRNPRYNLL-----------TS- 83 (212)
Q Consensus 34 ~~~~~~~v~~g~~v~l~C~~~~~--p~~~v~W~k~g-----~~l---~~--------~~~~~~~~~-----------~~- 83 (212)
..|..+.+.+|++++|.|.+.+. +.+.+.|||.. ..+ .. ....|+.+. ..
T Consensus 4 ~~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~ 83 (215)
T 3nl4_H 4 EESGGRLVTPGTPLTLACTVSGFSLNTYSMFWVRQAPGKGLQWIGIISNFGVIYYATWAKGRFTISKTSTTVDLKITSPT 83 (215)
T ss_dssp EEECCCEECTTCCEEEEEEEESSCTTTCCEEEEEECTTSCEEEEEEECTTCCEEECGGGTTTEEEEECSSEEEEEESSCC
T ss_pred EcCCCEEEcCCCcEEEEEEecCcccCCCeEEEEEECCCCCeEEEEEEecCCccccCCcccCCEEEEeeCCEEEEEECCCC
Confidence 34567889999999999999653 35689999832 111 00 012333332 21
Q ss_pred -CCCCeEEEeeeCCcc----------ceeEEeecCCCCCCCccccCCcceeEecCCcEEEEEeeeeCCC--CceEEEeCC
Q psy2441 84 -GAPGTYIKIKPNLFS----------PLSVYSADKIPPGFPQITEAPSTKVVEISHTTVLHCSASGNPP--PKISWIREM 150 (212)
Q Consensus 84 -~~~g~~l~i~~~~~~----------~~~v~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~--~~i~W~~~~ 150 (212)
.|.|.|.|....... .+.|.. ....+|.+...+....+..|+.+.|.|.+.+.++ ..+.|++++
T Consensus 84 ~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~---~~~~~P~i~~~~~~~~~~~g~~v~l~C~~~~~~p~~~~v~W~~~g 160 (215)
T 3nl4_H 84 TEDTATYFCVRKYGSEWGGDLWGPGTLVTVSS---GQPKAPSVFPLAPCCGDTPSSTVTLGCLVKGYLPEPVTVTWNSGT 160 (215)
T ss_dssp GGGCEEEEEEEECSSSSCEEEECCCEEEEECS---SCCBCCEEEEECCCTTCCC--CEEEEEEEEEEBSSCCEEEEGGGT
T ss_pred cccCEEEEEEEecCCCccceEEcCCEEEEEeC---CCcCCCEEEEecCCccccCCCcEEEEEEEeeeeCCCeEEEEeeCC
Confidence 377888887755311 222221 1222354442222234556999999999988544 357799988
Q ss_pred EEecCCCCCceEEcCCCCceeEEE---cCCCCCCCeeEEEEEEcccccceec
Q psy2441 151 LPVDTSRNPRYNLLTSGAPGALQI---TNSIEEDQGKYECVAENEVGTEYSP 199 (212)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~l~i---~~~~~~d~g~y~C~a~n~~g~~~~~ 199 (212)
..+........ ...+ +.+.+ ..+...| |.|+|.|.|..+.....
T Consensus 161 ~~~~~~~~~~~-~~~~---g~~~~~s~l~v~~~d-g~ytC~v~~~~~~~~~~ 207 (215)
T 3nl4_H 161 LTNGVRTFPSV-RQSS---GLYSLSSVVSVTSSS-QPVTCNVAHPATNTKVD 207 (215)
T ss_dssp BCTTEEECCCE-ECTT---SCEEEEEEEEECC----CCEEEEEEGGGTEEEE
T ss_pred EECCeEecCce-ECCC---CCEEEEEEEEEeccC-CEEEEEEEeCCCCcceE
Confidence 64432211111 1222 22222 3455667 99999999998866544
No 273
>1gsm_A Madcam-1, mucosal addressin cell adhesion molecule-1; cell adhesion protein, immunoglobulin fold, I-SET fold, cell adhesion glycoprotein; 1.9A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1bqs_A*
Probab=99.58 E-value=2.4e-13 Score=93.33 Aligned_cols=147 Identities=12% Similarity=0.145 Sum_probs=93.0
Q ss_pred cEEeeCCeEEEEcccCCCCCC--cEEEEeCCEEecC----CCCCeeEEeec--CCCCeEEEeeeC------CccceeEEe
Q psy2441 39 KVVEISHTTVLHCSASGNPPP--KISWIREMLPVDT----SRNPRYNLLTS--GAPGTYIKIKPN------LFSPLSVYS 104 (212)
Q Consensus 39 ~~v~~g~~v~l~C~~~~~p~~--~v~W~k~g~~l~~----~~~~~~~~~~~--~~~g~~l~i~~~------~~~~~~v~~ 104 (212)
+.+.+|+++.|.|.+ +.|.| .|+|++.+..+.. .....+.+... +|.|.|.|.... ..+.++|+.
T Consensus 17 v~v~~G~sv~L~C~a-~~p~P~~~i~W~~~~~~l~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~n~~~~~~~~~~ltV~~ 95 (210)
T 1gsm_A 17 VAVALGASRQLTCRL-ACADRGASVQWRGLDTSLGAVQSDTGRSVLTVRNASLSAAGTRVCVGSCGGRTFQHTVQLLVYA 95 (210)
T ss_dssp EEEETTCCEEEEEEE-CCSSTTCEEEEESSTTTTCCEEEESSEEEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEB
T ss_pred eEEeCCCCEEEEEEC-CCCCCCcceEEeecccccCcEEecCCccEEEECccCcccCceEEEEEEeCCCceEEEEEEEEEe
Confidence 588999999999999 87777 8999996533311 11133444444 388999998876 234555553
Q ss_pred ecCCCCCCCcccc-CCcceeEecCCcEEEEEeeeeC-CC----CceEEEeCCEEecCCCC-C-ceEE----cC--CCC--
Q psy2441 105 ADKIPPGFPQITE-APSTKVVEISHTTVLHCSASGN-PP----PKISWIREMLPVDTSRN-P-RYNL----LT--SGA-- 168 (212)
Q Consensus 105 ~~~~~~~~p~~~~-~~~~~~~~~g~~~~l~C~~~~~-p~----~~i~W~~~~~~~~~~~~-~-~~~~----~~--~~~-- 168 (212)
. |.... .+. ....|+.. |.|.+.+. |. ++|.|++|+..+..... . .+.. .. ...
T Consensus 96 ~-------P~~~~i~~~--~~~~g~~~-l~C~a~g~~P~~~~~lti~Wlk~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (210)
T 1gsm_A 96 F-------PNQLTVSPA--ALVPGDPE-VACTAHKVTPVDPNALSFSLLVGGQELEGAQALGPEVQEEEEEPQGDEDVLF 165 (210)
T ss_dssp C-------CSEEEEESS--SBCTTCCE-EEEEEEEEBCCCTTTEEEEEEETTEECTTCEECCCEEEECTTCCSSCCCCCE
T ss_pred c-------CCCcEEccc--eEEeCCce-EEEEeCCCCCCCCCCcEEEEEECCEEcccccccccceecccccccCCcceEE
Confidence 2 32221 121 45568888 99999884 64 48999999999864310 1 1100 00 110
Q ss_pred --ceeEEEcCCCCCCCeeEEEEEEcccccc
Q psy2441 169 --PGALQITNSIEEDQGKYECVAENEVGTE 196 (212)
Q Consensus 169 --~~~l~i~~~~~~d~g~y~C~a~n~~g~~ 196 (212)
.+++.+.....++.+.|+|.|.+.+-..
T Consensus 166 ~vts~~~~~~~~~D~~~~~tC~a~~~L~~~ 195 (210)
T 1gsm_A 166 RVTERWRLPPLGTPVPPALYCQATMRLPGL 195 (210)
T ss_dssp EEEEEEECCCCCSSCCSEEEEEEEEEETTE
T ss_pred EEEEEEeecCCcccCCceEEEEEEeeCCCC
Confidence 2345555666666789999999876444
No 274
>2yuv_A Myosin-binding protein C, SLOW-type; SLOW-type myosin-binding protein C, immunoglobulin domain, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2yxm_A
Probab=99.57 E-value=1.8e-14 Score=87.83 Aligned_cols=90 Identities=19% Similarity=0.284 Sum_probs=70.7
Q ss_pred CCccccCCcc-eeEecCCcEEEEEeeeeCCCCceEEEeCCEEecCCCCCceEEcCCCCceeEEEcCCCCCCCeeEEEEEE
Q psy2441 112 FPQITEAPST-KVVEISHTTVLHCSASGNPPPKISWIREMLPVDTSRNPRYNLLTSGAPGALQITNSIEEDQGKYECVAE 190 (212)
Q Consensus 112 ~p~~~~~~~~-~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~ 190 (212)
+|.|...+.. ..+.+|+.+.|.|.+. .|.+.+.|++++..+... .++.+..++....|.|.++..+|+|.|.|.|
T Consensus 7 ~p~~~~~~~~~~~v~~G~~v~l~C~~~-~p~~~v~W~k~g~~i~~~--~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a- 82 (100)
T 2yuv_A 7 GAAFAKILDPAYQVDKGGRVRFVVELA-DPKLEVKWYKNGQEIRPS--TKYIFEHKGCQRILFINNCQMTDDSEYYVTA- 82 (100)
T ss_dssp SCCEEECCCSCEEECTTEEEEEEEEES-CTTSCEEEEESSCBCCCB--TTEEEEEETTEEEEEEEEECTTTCCEEEEEE-
T ss_pred CCeEEecCCCccEEcCCCcEEEEEEec-CCCceEEEEECCEECCCC--CCEEEEecCCEEEEEEcCCCcCcCEEEEEEE-
Confidence 4667666665 5788999999999998 788999999999888764 4555555444468999999999999999999
Q ss_pred cccccceecceEEEEecce
Q psy2441 191 NEVGTEYSPSTMLYVKGTQ 209 (212)
Q Consensus 191 n~~g~~~~~~~~l~v~~~~ 209 (212)
|..... +.|.|.+++
T Consensus 83 ---g~~~~~-~~l~V~~~P 97 (100)
T 2yuv_A 83 ---GDEKCS-TELFVRSGP 97 (100)
T ss_dssp ---TTEEEE-EEEEECCSC
T ss_pred ---CCceEE-EEEEEecCC
Confidence 555555 777777654
No 275
>3m8o_H Immunoglobulin A1 heavy chain; immunoglobulin fold, immune system; 1.55A {Homo sapiens} PDB: 3qnx_B 3qny_B
Probab=99.57 E-value=1.4e-13 Score=95.92 Aligned_cols=151 Identities=17% Similarity=0.291 Sum_probs=93.1
Q ss_pred CCccEEeeCCeEEEEcccCCCC--CCcEEEEeCC--EE---e---c-----------CCCCCeeEEee------------
Q psy2441 36 PSTKVVEISHTTVLHCSASGNP--PPKISWIREM--LP---V---D-----------TSRNPRYNLLT------------ 82 (212)
Q Consensus 36 ~~~~~v~~g~~v~l~C~~~~~p--~~~v~W~k~g--~~---l---~-----------~~~~~~~~~~~------------ 82 (212)
|..+.+.+|++++|.|.+.+.+ .+.+.|||.. .. + . .....|+.+..
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~ 86 (221)
T 3m8o_H 7 SGGGLVQPGGSLKLSCAASGFTLSGSNVHWVRQASGKGLEWVGRIKRNAESDATAYAASMRGRLTISRDDSKNTAFLQMN 86 (221)
T ss_dssp ESCEEECTTCCEEEEEEEESSCGGGSEEEEEEECTTSCEEEEEEECCGGGTTCEEECGGGTTSEEEEEEGGGTEEEEEEC
T ss_pred cCCEEEcCCCCEEEEEEcccccccccEEEEEEECCCCCcEEEEEEcccccCcccccCccccccEEEEecCCCCEEEEEEC
Confidence 4567789999999999997643 5689999832 11 1 0 00124444432
Q ss_pred -c--CCCCeEEEeeeCCc--------cceeEEeecCCCCCCCccc-cCCcceeEecCCcEEEEEeeee-CCC-C-ceEEE
Q psy2441 83 -S--GAPGTYIKIKPNLF--------SPLSVYSADKIPPGFPQIT-EAPSTKVVEISHTTVLHCSASG-NPP-P-KISWI 147 (212)
Q Consensus 83 -~--~~~g~~l~i~~~~~--------~~~~v~~~~~~~~~~p~~~-~~~~~~~~~~g~~~~l~C~~~~-~p~-~-~i~W~ 147 (212)
. .|.|.|.|...... ..+.|.. .....|.+. ..+... .+|+.+.|.|.+.+ .|. + .+.|+
T Consensus 87 ~v~~~DsG~Y~C~~~~~~~~~~~~~~~~l~V~~---~~~~~p~v~~~~~~~~--~~g~~v~L~C~~~~~~P~~~~~v~W~ 161 (221)
T 3m8o_H 87 SLKSDDTAMYYCVIRGDVYNRQWGQGTLVTVSS---ASPTSPKVFPLSLCST--QPDGNVVIACLVQGFFPQEPLSVTWS 161 (221)
T ss_dssp SCCGGGCEEEEEEEESCTTCCCBBCCEEEEECS---CCCBCCEEEEEECCSC--CCTTEEEEEEEEEEEBSSCSEEEEES
T ss_pred CCCHHHCEEEEEEEECCChhheECCCEEEEEec---CCCCCCeEEEecCccc--ccCCCEEEEEEEEeeECCCCEEEEEE
Confidence 1 37778888765421 1222221 112224443 122222 57999999999988 676 4 89999
Q ss_pred eCCEEecCC--------CCCceEEcCCCCceeEEEcCCCCCCCeeEEEEEEcccccc
Q psy2441 148 REMLPVDTS--------RNPRYNLLTSGAPGALQITNSIEEDQGKYECVAENEVGTE 196 (212)
Q Consensus 148 ~~~~~~~~~--------~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~n~~g~~ 196 (212)
+++..+... ...++.. .+.|.|......|.|.|+|.|.|..+..
T Consensus 162 ~~g~~~~~~~~~~~~~~~~~~~~~-----~s~L~i~~~~~~d~g~ytC~v~~~~~~~ 213 (221)
T 3m8o_H 162 ESGQGVTARNFPPSQDASGDLYTT-----SSQLTLPATQCLAGKSVTCHVKHYTNPS 213 (221)
T ss_dssp CCSTTCEEEECCCEECSSSSCEEE-----EEEEEEEGGGSCTTCEEEEEEEETTSCC
T ss_pred ECCEECceEEcCceeeCCCCcEEE-----EEEEEECHHHcCCCCeEEEEEEECCCCc
Confidence 988665321 0111211 2468999999999999999999987654
No 276
>2cr3_A Basic fibroblast growth factor receptor 1; IG fold, FGFR1, BFGF-R, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.57 E-value=1e-14 Score=88.76 Aligned_cols=84 Identities=19% Similarity=0.391 Sum_probs=67.2
Q ss_pred CCcceeEecCCcEEEEEeeeeCCCCceEEEeCCEEecCCCCCceEEcCCCCceeEEEcCCCCCCCeeEEEEEEcccccce
Q psy2441 118 APSTKVVEISHTTVLHCSASGNPPPKISWIREMLPVDTSRNPRYNLLTSGAPGALQITNSIEEDQGKYECVAENEVGTEY 197 (212)
Q Consensus 118 ~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~n~~g~~~ 197 (212)
.+....+.+|+.+.|.|.+.+.| |.+.|++++..+... .++... + ..|.|.++..+|+|.|.|.|.|..|...
T Consensus 9 ~p~~~~v~~G~~v~L~C~~~g~p-p~i~W~k~g~~~~~~--~~~~~~-~---~~L~i~~v~~~D~G~Y~C~a~n~~g~~~ 81 (99)
T 2cr3_A 9 EVESFLVHPGDLLQLRCRLRDDV-QSINWLRDGVQLAES--NRTRIT-G---EEVEVQDSVPADSGLYACVTSSPSGSDT 81 (99)
T ss_dssp CEEECCBCTTSCEEEECCCCSSC-CEEEEEESSSBCCCC--SSEEEC-S---SEEEETTCCTTTCEEEEEEEEETTEEEE
T ss_pred CCcCeEEeCCCcEEEEEEecCCC-CeEEEEECCEECCCC--CcEEEE-C---CEEEEccCCHHHCEEEEEEEEeCCceEE
Confidence 34456678899999999999987 799999999877654 344443 3 6999999999999999999999999876
Q ss_pred ecceEEEEecce
Q psy2441 198 SPSTMLYVKGTQ 209 (212)
Q Consensus 198 ~~~~~l~v~~~~ 209 (212)
.. +.|.|...+
T Consensus 82 ~~-~~l~V~~~~ 92 (99)
T 2cr3_A 82 TY-FSVNVSDAL 92 (99)
T ss_dssp EE-EEECBCSCC
T ss_pred EE-EEEEEecCC
Confidence 55 666665543
No 277
>1hxm_B Gamma-delta T-cell receptor; IG domain, TCR, GDTCR, immune system; 3.12A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=99.57 E-value=1e-13 Score=97.97 Aligned_cols=172 Identities=16% Similarity=0.165 Sum_probs=101.0
Q ss_pred CeEEeCCCccEEeeCCeEEEEcccCCC--CCCcEEEEeCC--E---Eec-----------CC-CCCeeEEeec-------
Q psy2441 30 PQITEAPSTKVVEISHTTVLHCSASGN--PPPKISWIREM--L---PVD-----------TS-RNPRYNLLTS------- 83 (212)
Q Consensus 30 p~~~~~~~~~~v~~g~~v~l~C~~~~~--p~~~v~W~k~g--~---~l~-----------~~-~~~~~~~~~~------- 83 (212)
+.+...|..+.+.+|++++|.|.+.+. +.+.+.|||+. . .+. .. ...|+.+...
T Consensus 2 ~~v~q~p~~v~~~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~ 81 (242)
T 1hxm_B 2 GHLEQPQISSTKTLSKTARLECVVSGITISATSVYWYRERPGEVIQFLVSISYDGTVRKESGIPSGKFEVDRIPETSTST 81 (242)
T ss_dssp CEEECCCSEEEEETTCCEEEEEEEESSCTTTSCEEEEEECTTSCCEEEEEECSSSCEEECTTCCTTSEEEEEETTTTEEE
T ss_pred CccCcCCceEEecCCCcEEEEEEeCCccccCceEEEEEeCCCCCcEEEEEEecCCceecCCcccCCeEEEEecCCCcEEE
Confidence 345667788899999999999999764 56789999842 1 110 00 2345544321
Q ss_pred --------CCCCeEEEeeeCC-------------ccceeEEeecCCCCCCCcccc-CCcceeEecCCcEEEEEeeeeC-C
Q psy2441 84 --------GAPGTYIKIKPNL-------------FSPLSVYSADKIPPGFPQITE-APSTKVVEISHTTVLHCSASGN-P 140 (212)
Q Consensus 84 --------~~~g~~l~i~~~~-------------~~~~~v~~~~~~~~~~p~~~~-~~~~~~~~~g~~~~l~C~~~~~-p 140 (212)
.|.|.|.|..... ...+.|.........+|.... .+....+..|+.+.|.|.+.+. |
T Consensus 82 L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~~~~p~~~v~~p~~~~~~~g~~v~L~C~~~g~~P 161 (242)
T 1hxm_B 82 LTIHNVEKQDIATYYCALWEAQQELGKKIKVFGPGTKLIITDKQLDADVSPKPTIFLPSIAETKLQKAGTYLCLLEKFFP 161 (242)
T ss_dssp EEECSCCGGGCEEEEEEEEEECSSTTCEEEEECCCEEEEEESSCCCSCCSCBCCCCCCCGGGGGSSSCEEEEEEEEEESS
T ss_pred EEECCCCcccCEEEEEeeecCCccccccceeEcCcEEEEEcccccCCCcCCCceEECCChhhcccCCCceEEEEEeeEEC
Confidence 3777777766532 112333321100000122221 1333345569999999999886 6
Q ss_pred C-CceEEEeCCE-EecCCCCCceEEcCCCC---ceeEEEcCCCCCCCeeEEEEEEcccccceecceEEEE
Q psy2441 141 P-PKISWIREML-PVDTSRNPRYNLLTSGA---PGALQITNSIEEDQGKYECVAENEVGTEYSPSTMLYV 205 (212)
Q Consensus 141 ~-~~i~W~~~~~-~~~~~~~~~~~~~~~~~---~~~l~i~~~~~~d~g~y~C~a~n~~g~~~~~~~~l~v 205 (212)
. +.+.|++++. .+.......... .++. .+.|.|.+... + |.|+|.|.|..+..... ..+.+
T Consensus 162 ~~~~v~W~~~~~~~l~~~~~~~~~~-~~~~~~~~s~L~i~~~~~-~-g~y~C~v~n~~~~~~~~-~~~~~ 227 (242)
T 1hxm_B 162 DVIKIHWEEKKSNTILGSQEGNTMK-TNDTYMKFSWLTVPEKSL-D-KEHRCIVRHENNKNGVD-QEIIF 227 (242)
T ss_dssp CCEEEEEEESSSCCCCCCEECCCEE-CSSSEEEEEEEEECTGGG-G-SCEEEEEEETTSGGGSC-EEEEE
T ss_pred CCeEEEEEcCCCEeecCccccceec-CCCcEEEEEEEEEccccC-C-CEEEEEEEeCCCCCCce-eEeec
Confidence 4 6999999986 453220011111 1111 25688877665 4 99999999998876555 55444
No 278
>3mjg_X Beta-type platelet-derived growth factor receptor; protein-protein complex, growth factor-receptor complex, TRA hormone complex; HET: NDG NAG; 2.30A {Homo sapiens}
Probab=99.57 E-value=6.8e-15 Score=106.48 Aligned_cols=160 Identities=16% Similarity=0.148 Sum_probs=95.6
Q ss_pred eEEeCCCccEEeeCCeEEEEcccCCCCCCcEEEEeCCEEecCC----CC----CeeEEeec--CCCCeEEEeeeCCc---
Q psy2441 31 QITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREMLPVDTS----RN----PRYNLLTS--GAPGTYIKIKPNLF--- 97 (212)
Q Consensus 31 ~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~k~g~~l~~~----~~----~~~~~~~~--~~~g~~l~i~~~~~--- 97 (212)
.+........+.+|+.+.|.|.+.+. +.|+|++..+... .. ..+.+... +|.|.|.|...+..
T Consensus 2 ~i~~~~~~~~v~~G~~v~L~C~~~~~----v~W~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~ 77 (289)
T 3mjg_X 2 VVTPPGPELVLNVSSTFVLTCSGSAP----VVWERMSQEPPQEMAKAQDGTFSSVLTLTNLTGLDTGEYFCTHNDSRGLE 77 (289)
T ss_dssp CBCSSCSEEECCTTCCEEEEEEESSC----CEEEBTTBCCSEEEEECTTSCEEEEEEECSCCGGGCEEEEEECCC-----
T ss_pred eecCCCCeEEEeCCCcEEEEEeccce----EEEECCCCCcccceeccCCCceeEEEEEccCChhhCEEEEEEEcccCCCC
Confidence 33334456778899999999999874 9999998775211 01 22333332 48899999887622
Q ss_pred --cceeEEeecCCCCCCCccccCCcc--eeEecCCcEEEEEeeeeCCCCceEEEeCCEEecCCCCCceEEcCCCCceeEE
Q psy2441 98 --SPLSVYSADKIPPGFPQITEAPST--KVVEISHTTVLHCSASGNPPPKISWIREMLPVDTSRNPRYNLLTSGAPGALQ 173 (212)
Q Consensus 98 --~~~~v~~~~~~~~~~p~~~~~~~~--~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~l~ 173 (212)
....+...... +..+.+...+.. ..+.+|+.+.|.|.+. .|.+.+.|++++...... ..+ .... ..+
T Consensus 78 ~~~~~~~~v~v~~-p~~~~~~~~~~~~~~~v~~G~~v~l~C~~~-~p~~~v~w~~~~~~~~~~--~~~--~~~~--~~~- 148 (289)
T 3mjg_X 78 TDERKRLYIFVPD-PTVGFLPNDAEELFIFLTEITEITIPCRVT-DPQLVVTLHEKKGDVALP--VPY--DHQR--GFS- 148 (289)
T ss_dssp -CCCEEEEEECCC-TTCCBCCCCHHHHEEEESSCCCEEECCCBS-CTTSCEEEEESSCCSCCC--CCE--ETTT--EEE-
T ss_pred cCcEEeEEEEEEC-CCcCcccCCCCcceEEeecCCeEEEEeEcC-CCCceEEEEeCCCCCccc--eee--cCCc--Cee-
Confidence 22223222211 111222222221 5688899999999998 777899998865222211 111 1110 111
Q ss_pred EcCCCCCCCeeEEEEEEcccccceecceEEEEec
Q psy2441 174 ITNSIEEDQGKYECVAENEVGTEYSPSTMLYVKG 207 (212)
Q Consensus 174 i~~~~~~d~g~y~C~a~n~~g~~~~~~~~l~v~~ 207 (212)
...|.|.|.|.|.|..+........+.|..
T Consensus 149 ----~~~d~G~Y~C~a~n~~~~~~s~~~~l~v~~ 178 (289)
T 3mjg_X 149 ----GIFEDRSYICKTTIGDREVDSDAYYVYRLQ 178 (289)
T ss_dssp ----ECCCSSEEEEEEEETTEEEECCCEEEEECC
T ss_pred ----eeccCcEEEEEEEeCCceeeeeeEEEEecC
Confidence 356899999999987776655546666655
No 279
>2edh_A Obscurin; structural genomics, NPPSFA, national project on P structural and functional analyses, riken structural genomics/proteomics initiative; NMR {Homo sapiens}
Probab=99.57 E-value=4.6e-14 Score=87.90 Aligned_cols=90 Identities=28% Similarity=0.431 Sum_probs=71.9
Q ss_pred CccccCCcceeEecCCcEEEEEeeeeCCCCceEEEeCCEEecCCCCCceEEcCCCCceeEEEcCCCCCCCeeEEEEEEcc
Q psy2441 113 PQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREMLPVDTSRNPRYNLLTSGAPGALQITNSIEEDQGKYECVAENE 192 (212)
Q Consensus 113 p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~n~ 192 (212)
|.+...+....+.+|+.+.|.|.+.+. |.+.|++++..+... .++.+..++....|.|.++..+|+|.|.|.|
T Consensus 20 p~~~~~~~~~~v~~G~~v~l~C~~~~~--p~v~W~k~~~~l~~~--~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a--- 92 (113)
T 2edh_A 20 IKFTEGLRNEEATEGATAVLRCELSKM--APVEWWKGHETLRDG--DRHSLRQDGARCELQIRGLVAEDAGEYLCMC--- 92 (113)
T ss_dssp CCEEECCCCCEECTTSCEEEEEEESSC--CCCEEEESSSBCCCS--SSEEEEEETTEEEEEECSCCSTTCEEEEEEE---
T ss_pred CcccccCCceEEeCCCeEEEEEEECCC--CcEEEEECCEECCCC--CcEEEEECCCEEEEEECCCChhhCEEEEEEe---
Confidence 567667777889999999999999765 689999999888764 5666655544468999999999999999999
Q ss_pred cccceecceEEEEecceec
Q psy2441 193 VGTEYSPSTMLYVKGTQVD 211 (212)
Q Consensus 193 ~g~~~~~~~~l~v~~~~~p 211 (212)
|..... +.|.|.+.+..
T Consensus 93 -~~~~~~-~~l~V~~~p~~ 109 (113)
T 2edh_A 93 -GKERTS-AMLTVRAMPSG 109 (113)
T ss_dssp -TTEEEE-EEEEECCCCCS
T ss_pred -CCCCEE-EEEEEeCCCCC
Confidence 555555 78888776654
No 280
>1zvo_C Myeloma immunoglobulin D delta; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=99.57 E-value=2.4e-13 Score=106.13 Aligned_cols=76 Identities=9% Similarity=0.140 Sum_probs=52.6
Q ss_pred eeEecCCcEEEEEeeeeCCC--CceEEEeCCEEecCC-CCCceEEcCCCC---ceeEEEcCCCCCCCeeEEEEEEccccc
Q psy2441 122 KVVEISHTTVLHCSASGNPP--PKISWIREMLPVDTS-RNPRYNLLTSGA---PGALQITNSIEEDQGKYECVAENEVGT 195 (212)
Q Consensus 122 ~~~~~g~~~~l~C~~~~~p~--~~i~W~~~~~~~~~~-~~~~~~~~~~~~---~~~l~i~~~~~~d~g~y~C~a~n~~g~ 195 (212)
..+.+|+.+.|.|.+.+.++ ..|.|++++..+... .........++. .+.|.|.....+|.|.|+|.|.|..+.
T Consensus 307 ~~~~~g~~~~L~C~v~g~~P~~~~i~W~k~g~~~~~~~~~~~~~~~~~gt~~~~s~L~i~~~~~~d~g~y~C~a~n~~~~ 386 (512)
T 1zvo_C 307 QDLWLRDKATFTCFVVGSDLKDAHLTWEVAGKVPTGGVEEGLLERHSNGSQSQHSRLTLPRSLWNAGTSVTCTLNHPSLP 386 (512)
T ss_pred HHhccCCceEEEEEEeceECCCeEEEEEECCEeccCceeccceecCCCCeEEEEEEEEEchHHhcCCCeEEEEEEeCCCC
Confidence 34567999999999988643 389999999875521 001111111111 256899989999999999999998765
Q ss_pred ce
Q psy2441 196 EY 197 (212)
Q Consensus 196 ~~ 197 (212)
..
T Consensus 387 ~~ 388 (512)
T 1zvo_C 387 PQ 388 (512)
T ss_pred CC
Confidence 43
No 281
>3mtr_A N-CAM-1, NCAM-1, neural cell adhesion molecule 1; immunoglobulin domain, fibronectin type III repeat, CE adhesion; 1.80A {Homo sapiens}
Probab=99.56 E-value=2.5e-14 Score=99.20 Aligned_cols=95 Identities=23% Similarity=0.419 Sum_probs=77.7
Q ss_pred CccccCCcceeEecCCcEEEEEeeeeCCCCceEEEeCCEEecCCCCCceEEcCCCCceeEEEcCCCCCCCeeEEEEEEcc
Q psy2441 113 PQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREMLPVDTSRNPRYNLLTSGAPGALQITNSIEEDQGKYECVAENE 192 (212)
Q Consensus 113 p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~n~ 192 (212)
|.+ ..+....+.+|+.+.|.|.+.+.|.|.+.|++++..+......++..........|.|.++..+|.|.|.|.|.|.
T Consensus 20 P~~-~~p~~~~~~~G~~v~l~C~~~g~p~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~ 98 (215)
T 3mtr_A 20 PKL-QGPVAVYTWEGNQVNITCEVFAYPSATISWFRDGQLLPSSNYSNIKIYNTPSASYLEVTPDSENDFGNYNCTAVNR 98 (215)
T ss_dssp EEE-ECCSEEEECTTCCEEEEEEEEEESCCEEEEEETTEESSCSSSCSEEEEEETTEEEEEECCCSGGGCEEEEEEEECS
T ss_pred Ccc-cCCceEEEECCCCEEEEEEEeecCCCEEEEEECCeECCCCCCccEEEecCCCeeEEEEecCChhhCeEEEEEEEEC
Confidence 555 4555678889999999999999999999999999988765334555554333489999999999999999999999
Q ss_pred cccceecceEEEEecce
Q psy2441 193 VGTEYSPSTMLYVKGTQ 209 (212)
Q Consensus 193 ~g~~~~~~~~l~v~~~~ 209 (212)
.|..... +.|.|...+
T Consensus 99 ~g~~~~~-~~l~v~~~P 114 (215)
T 3mtr_A 99 IGQESLE-FILVQADTP 114 (215)
T ss_dssp SCEEEEE-EEEEECCCC
T ss_pred CCceEEE-EEEEECCCC
Confidence 9988776 777776544
No 282
>3liz_H 4C3 monoclonal antibody heavy chain; hydrolase-immune system complex; HET: NAG BMA MAN; 1.80A {Mus musculus} PDB: 3rvv_D* 3rvu_D 3rvt_D* 3rvw_D* 3rvx_D 1lo4_H 1ub6_H 3r06_B 3r08_H
Probab=99.56 E-value=8.3e-14 Score=99.08 Aligned_cols=161 Identities=16% Similarity=0.259 Sum_probs=96.1
Q ss_pred CCccEEeeCCeEEEEcccCCC--CCCcEEEEeCC-----EEe---c---------CCCCCeeEEee-------------c
Q psy2441 36 PSTKVVEISHTTVLHCSASGN--PPPKISWIREM-----LPV---D---------TSRNPRYNLLT-------------S 83 (212)
Q Consensus 36 ~~~~~v~~g~~v~l~C~~~~~--p~~~v~W~k~g-----~~l---~---------~~~~~~~~~~~-------------~ 83 (212)
+..+.+.+|++++|.|.+.+. +...+.|||.. ..+ . .....|+.+.. .
T Consensus 7 p~~v~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v 86 (253)
T 3liz_H 7 SGGGLVQPGGSLKLSCAASGFTFSSFAMSWGRQTPDKRLELVATINSNGASTYYPDTVKGRFTISRDNAKNTLFLQMSSL 86 (253)
T ss_dssp ECCCEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEECCTTTTTTCEEEEEGGGTEEEEEECSC
T ss_pred CCCEEECCCCcEEEEEEeeCccccCceEEEEEECCCCCcEEEEEEecCCCccccCcccCCcEEEEEeCCCCEEEEEECCC
Confidence 456789999999999999663 35679999842 111 0 01123444432 1
Q ss_pred --CCCCeEEEeeeCCc----------cceeEEeecCCCCCCCccccCCcceeEecCCcEEEEEeeee-CCCC-ceEEEeC
Q psy2441 84 --GAPGTYIKIKPNLF----------SPLSVYSADKIPPGFPQITEAPSTKVVEISHTTVLHCSASG-NPPP-KISWIRE 149 (212)
Q Consensus 84 --~~~g~~l~i~~~~~----------~~~~v~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~-~p~~-~i~W~~~ 149 (212)
+|.|.|.|...... ..+.|.. .....|.+........+..|+.+.|.|.+.+ .|.+ .+.|+++
T Consensus 87 ~~~DsG~Y~C~~~~~~~~~~~~~~~~~~l~V~~---~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~~~ 163 (253)
T 3liz_H 87 KSEDTAMYYCTRDPAGRAWFAYWGQGTLVTVSA---AKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSG 163 (253)
T ss_dssp CGGGCEEEEEEECCBTTTBCCEECCCEEEEECS---SCCBCCEEEEECC------CCEEEEEEEEEEEBSSCCEEEEGGG
T ss_pred ChhhCEEEEEEEecCCcceeeEECCCEEEEEec---cCCCCCeEEEecCCcccCCCCcEEEEEEEeeEeCCCeEEEEEeC
Confidence 37777877765421 1222221 1122344443333334556999999999988 6766 8999998
Q ss_pred CEEecCCC------CCceEEcCCCCceeEEEcCCCCCCCeeEEEEEEcccccceecceEEEEe
Q psy2441 150 MLPVDTSR------NPRYNLLTSGAPGALQITNSIEEDQGKYECVAENEVGTEYSPSTMLYVK 206 (212)
Q Consensus 150 ~~~~~~~~------~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~n~~g~~~~~~~~l~v~ 206 (212)
+....... ...+.. .+.|.|.+...+| |.|+|.|.|..+..... ..+.+.
T Consensus 164 ~~~~~~~~~~~~~~~g~~~~-----~s~L~i~~~~~~d-g~ytC~v~~~~~~~~~~-~~~~~~ 219 (253)
T 3liz_H 164 SLSSGVHTFPAVLQSDLYTL-----SSSVTVPSSTWPS-ETVTCNVAHPASSTKVD-KKIVPR 219 (253)
T ss_dssp TBCTTEEECCCEEETTEEEE-----EEEEEEETTSTTT-SCCEEEEEEGGGTEEEE-EECCCC
T ss_pred CeecceEeCCccccCCeEEE-----EEEEEEcHHHCCC-ceEEEEEEECCCCcceE-EEecCc
Confidence 86331110 011111 2679999999999 99999999998866544 554443
No 283
>2cry_A KIN of IRRE-like protein 3; IG fold, KIN of irregular chiasm-like protein 3, nephrin- like 2, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.1
Probab=99.56 E-value=3.3e-16 Score=99.12 Aligned_cols=94 Identities=24% Similarity=0.446 Sum_probs=74.0
Q ss_pred CccccCCcceeEecCCcEEEEEeeeeCCCCc-eEEEeCCEEecCCCCCceEEc----CCCCceeEEEcCCCCCCC-eeEE
Q psy2441 113 PQITEAPSTKVVEISHTTVLHCSASGNPPPK-ISWIREMLPVDTSRNPRYNLL----TSGAPGALQITNSIEEDQ-GKYE 186 (212)
Q Consensus 113 p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~-i~W~~~~~~~~~~~~~~~~~~----~~~~~~~l~i~~~~~~d~-g~y~ 186 (212)
|.+.. +....+.+|+.+.|.|.+.+.|.|. +.|++++..+......++... .+.....|.|.++..+|. |.|.
T Consensus 15 P~i~~-~~~~~~~~G~~v~l~C~~~g~P~p~~i~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~~G~Y~ 93 (122)
T 2cry_A 15 PIISS-TQTQHALHGEKGQIKCFIRSTPPPDRIAWSWKENVLESGTSGRYTVETISTEEGVISTLTISNIVRADFQTIYN 93 (122)
T ss_dssp CCEEE-ECCCCCCTTSCCCCCEEECCSSCCSEEEEESSSCEECSEEETTEEEEEEEETTEEEEEEECTTCCHHHHHSCEE
T ss_pred CCccC-CCeEEEecCCCEEEEEEEeecCCCcEeEEEECCEEccCCCCCCEEEEEecCCCceEEEEEEcCCChhhCCceEE
Confidence 66666 6667788999999999999999997 999999988875322444432 111135899999999998 9999
Q ss_pred EEEEcccccceecceEEEEecc
Q psy2441 187 CVAENEVGTEYSPSTMLYVKGT 208 (212)
Q Consensus 187 C~a~n~~g~~~~~~~~l~v~~~ 208 (212)
|.|.|..|..... +.|.|++.
T Consensus 94 C~a~N~~G~~~~~-~~l~V~~~ 114 (122)
T 2cry_A 94 CTAWNSFGSDTEI-IRLKEQGS 114 (122)
T ss_dssp EEEECSSCEEEEE-ECCCCSCS
T ss_pred EEEECCCCeEEEE-EEEEECCC
Confidence 9999999998866 77777654
No 284
>1c5d_H Monoclonal antibody against the main immunogenic the human muscle acetylcholine receptor...; immunoglobulin, immune system; 2.40A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 2arj_H 3b9k_H* 2gk0_H 2gjz_H 1fn4_B 3mj8_H 3mj9_H*
Probab=99.55 E-value=9.4e-14 Score=96.39 Aligned_cols=154 Identities=21% Similarity=0.336 Sum_probs=90.3
Q ss_pred CCccEEeeCCeEEEEcccCCCC--CCcEEEEeCC--EEe---c-----------CCCCCeeEEee-------------c-
Q psy2441 36 PSTKVVEISHTTVLHCSASGNP--PPKISWIREM--LPV---D-----------TSRNPRYNLLT-------------S- 83 (212)
Q Consensus 36 ~~~~~v~~g~~v~l~C~~~~~p--~~~v~W~k~g--~~l---~-----------~~~~~~~~~~~-------------~- 83 (212)
|....+.+|+++.|.|.+.+.+ .+.+.|||+. ..+ . .....|+.+.. .
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~ 86 (215)
T 1c5d_H 7 SGPGLVQPSQTLSLTCTVSGFPLTTNGVSWVRQPPGKGLEWIAAISSGGSPYYNSALKSRLSINRDTSKSQVFLKMNSLQ 86 (215)
T ss_dssp ECCCEECTTCCEEEEEEECSSCTTSCCEEEEEECTTSCCEEEEEECTTCCEECCTTTGGGEEEEEETTTTEEEEEESSCC
T ss_pred CCCeeecCCCcEEEEEEECCCcCCCCeEEEEEECCCCCcEEEEEEcCCCCcEECCcccCcEEEEeeCCCceEEEEECCCC
Confidence 5567899999999999998764 4689999852 111 0 01124444432 1
Q ss_pred -CCCCeEEEeeeCCc---------cceeEEeecCCCCCCCccccCCcceeEecCCcEEEEEeeeeC-CCC-ceEEEeCCE
Q psy2441 84 -GAPGTYIKIKPNLF---------SPLSVYSADKIPPGFPQITEAPSTKVVEISHTTVLHCSASGN-PPP-KISWIREML 151 (212)
Q Consensus 84 -~~~g~~l~i~~~~~---------~~~~v~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~-p~~-~i~W~~~~~ 151 (212)
.|.|.|.|...... ..+.|.. ..+.+|.+...+....+..|+.+.|.|.+.+. |.| .+.|++++.
T Consensus 87 ~~D~G~Y~C~~~~~~~~~~~~~~~~~L~V~~---~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~g~ 163 (215)
T 1c5d_H 87 TEDTAIYFCTREDGWNYFDYWGPGTMVTVSS---AQTTAPSVYPLAPGCGDTTSSTVTLGCLVKGYFPEPVTVTWNSGAL 163 (215)
T ss_dssp GGGCEEEEEEECCSSSCSCCBCCCEEEEECS---SCCBCCCEEEECCCSSCCCCSSEEEEEEEEEEBSSCCEEEEGGGTT
T ss_pred cccCEEEEEEEecCCcccceEcCCEEEEecC---CCCCCCeEEeccCChhhccCCcEEEEEEEeeeEcCCcEEEEccCCc
Confidence 37777777765431 1222221 12223444432222234679999999999886 777 999999876
Q ss_pred EecCCCCCceEEcCCCC---ceeEEEcCCCCCCCeeEEEEEEcccccce
Q psy2441 152 PVDTSRNPRYNLLTSGA---PGALQITNSIEEDQGKYECVAENEVGTEY 197 (212)
Q Consensus 152 ~~~~~~~~~~~~~~~~~---~~~l~i~~~~~~d~g~y~C~a~n~~g~~~ 197 (212)
.+........ . .++. .+.|. ....+| |.|+|.|.|..|...
T Consensus 164 ~~~~~~~~~~-~-~~g~~~~~s~L~--~~~~~~-g~ytC~v~n~~~~~~ 207 (215)
T 1c5d_H 164 SSDVHTFPAV-L-QSGLYTLTSSVT--SSTWPS-QTVTCNVAHPASSTK 207 (215)
T ss_dssp CCSCCBCCCE-E-ETTEEEEEEEEE--ESSTTT-SCCEEEEEEGGGTEE
T ss_pred cCceEecCcc-c-CCCCEEEEEEEe--cccCCC-CeEEEEEEeCCCCcc
Confidence 5432101111 1 1110 02233 444456 999999999888664
No 285
>2aty_A Complement receptor chimeric conjugate CR2-IG; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=99.55 E-value=6.7e-14 Score=105.15 Aligned_cols=161 Identities=18% Similarity=0.215 Sum_probs=98.1
Q ss_pred eCCCccE-EeeCCeEEEEcccCCC---CC-CcEEEEeCCEEecCC--------CCC------eeEEeec--CCCCeEEEe
Q psy2441 34 EAPSTKV-VEISHTTVLHCSASGN---PP-PKISWIREMLPVDTS--------RNP------RYNLLTS--GAPGTYIKI 92 (212)
Q Consensus 34 ~~~~~~~-v~~g~~v~l~C~~~~~---p~-~~v~W~k~g~~l~~~--------~~~------~~~~~~~--~~~g~~l~i 92 (212)
..+.... +.+|+.++|.|.+.+. |. ..|.|||++..+... ... .+.+... +|.+.|.|.
T Consensus 172 ~~p~~~~~~~~g~~v~L~C~~~g~~P~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~s~L~I~~~~~~D~g~Y~C~ 251 (376)
T 2aty_A 172 FPPKPKDVLTITLTPKVTCVVVDISKDDPEVQFSWFVDDVEVHTAQTQPREEQFNSTFRSVSELPIMHQDWLNGKEFKCR 251 (376)
T ss_pred eCcCHHHceeeCCeeEEEEEEeccccCCCccEEEEEECCccccCcccCCCCcccCCcEEEEEEEEechHhccCCCEEEEE
Confidence 4454455 8899999999999876 33 269999998665321 011 1222221 377889998
Q ss_pred eeCCcc--ceeEEe-ecCCCCCCCccccCCcceeEecCCcEEEEEeeeeCC--CCceEEEeCCEEecCCCCCceEEcCCC
Q psy2441 93 KPNLFS--PLSVYS-ADKIPPGFPQITEAPSTKVVEISHTTVLHCSASGNP--PPKISWIREMLPVDTSRNPRYNLLTSG 167 (212)
Q Consensus 93 ~~~~~~--~~~v~~-~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p--~~~i~W~~~~~~~~~~~~~~~~~~~~~ 167 (212)
...... .+.... .......+|.+...+.......|+.+.|.|.+.+.+ .+.|.|++++..+............++
T Consensus 252 ~~~~~~~~~~~~~v~~~~~~~~~P~v~v~~~~~~~~~g~~~~L~C~~~g~~P~~i~v~W~k~g~~~~~~~~~~~~~~~dg 331 (376)
T 2aty_A 252 VNSAAFPAPIEKTISKTKGRPKAPQLYTIPPPKEQMAKDKVSLTCMITDFFPEDITVEWQWNGQPAENYKNTQPIMNTNE 331 (376)
T ss_pred EecCCCCCceEEEEcCCCCCCcCCeEEeeCCCHHHhcCCceEEEEEEEEeECCCcEEEEEECCEECCCeEeCCceECCCC
Confidence 776322 111111 101122346666555554444588999999999853 458999999987754211111112221
Q ss_pred C---ceeEEEcCCCCCCCeeEEEEEEcccc
Q psy2441 168 A---PGALQITNSIEEDQGKYECVAENEVG 194 (212)
Q Consensus 168 ~---~~~l~i~~~~~~d~g~y~C~a~n~~g 194 (212)
. ...|.+.....+|.|.|+|.|.|..-
T Consensus 332 ty~~~s~L~i~~~~~~~~~~YtC~v~h~~l 361 (376)
T 2aty_A 332 SYFVYSKLNVQKSNWEAGNTFTCSVLHEGL 361 (376)
T ss_pred CEEEEEEEEEcHHHhCCCCcEEEEEEeCCC
Confidence 1 24577777777789999999998653
No 286
>4hwu_A Fibroblast growth factor receptor 2; FGFR2, KGFR, CD332, IG-C2 type 1 domain, IG superfamily, IMM system, structural genomics, PSI-biology; 2.90A {Mus musculus}
Probab=99.55 E-value=6.8e-14 Score=84.34 Aligned_cols=83 Identities=27% Similarity=0.411 Sum_probs=67.4
Q ss_pred CCcceeEecCCcEEEEEeeeeCCCCceEEEeCCEEecCCCCCceEEcCCCCceeEEEcCCCCCCCeeEEEEEEcccccce
Q psy2441 118 APSTKVVEISHTTVLHCSASGNPPPKISWIREMLPVDTSRNPRYNLLTSGAPGALQITNSIEEDQGKYECVAENEVGTEY 197 (212)
Q Consensus 118 ~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~n~~g~~~ 197 (212)
.+....+.+|+.+.|.|.+.+ .|.+.|++++..+... .++... + ..|.|.++..+|+|.|.|.|.|..|...
T Consensus 7 ~p~~~~v~~G~~~~l~C~~~~--~p~v~W~k~g~~~~~~--~~~~~~-~---~~L~i~~~~~~D~G~Y~C~a~n~~g~~~ 78 (95)
T 4hwu_A 7 QPEAYVVAPGESLELQCMLKD--AAVISWTKDGVHLGPN--NRTVLI-G---EYLQIKGATPRDSGLYACTAARTVDSET 78 (95)
T ss_dssp -CEEEEECTTSCEEEECCCCT--TCEEEEEETTEEECCC--SSEEEE-T---TEEEECSCCGGGCEEEEEEEECSSCEEE
T ss_pred CCCcEEECCCCEEEEEEEeCC--CCEEEEEECCEECCCC--ceEEEe-C---CEEEECcCCcccCEEEEEEEccCCCcEE
Confidence 455677889999999999987 4799999999988764 444443 3 5899999999999999999999999887
Q ss_pred ecceEEEEecce
Q psy2441 198 SPSTMLYVKGTQ 209 (212)
Q Consensus 198 ~~~~~l~v~~~~ 209 (212)
.. +.|.|.+..
T Consensus 79 ~~-~~l~V~~~~ 89 (95)
T 4hwu_A 79 WI-FMVNVTDAA 89 (95)
T ss_dssp EE-EEEEECCC-
T ss_pred EE-EEEEEeCCc
Confidence 76 888887654
No 287
>2cpc_A KIAA0657 protein; immunoglobulin domain, IG domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.54 E-value=1e-13 Score=86.35 Aligned_cols=82 Identities=22% Similarity=0.312 Sum_probs=65.0
Q ss_pred eeEecCCcEEEEEeeeeCCCCceEEEeCCEEecCCCCCceEEcCCCCceeEEEcCCCCCCCeeEEEEEEcccccceecce
Q psy2441 122 KVVEISHTTVLHCSASGNPPPKISWIREMLPVDTSRNPRYNLLTSGAPGALQITNSIEEDQGKYECVAENEVGTEYSPST 201 (212)
Q Consensus 122 ~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~n~~g~~~~~~~ 201 (212)
..+.+|+.+.|.|.+. .|.+.+.|++++..+... .++....++....|.|.++..+|+|.|.|.|.| .... +
T Consensus 23 ~~~~~G~~v~L~C~~~-~p~~~v~W~k~g~~~~~~--~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n----~~~~-~ 94 (113)
T 2cpc_A 23 VAAVRLERVVLTCELC-RPWAEVRWTKDGEEVVES--PALLLQKEDTVRRLVLPAVQLEDSGEYLCEIDD----ESAS-F 94 (113)
T ss_dssp EEEETTCCEEEEEEES-CTTCCCEEEETTEECCCB--TTBEEEECSSEEEEEESSCCTTTCEEEEEESSS----CEEE-E
T ss_pred EEEEcCCeEEEEEEec-CCCCeEEEEECCEECccC--CCEEEEECCCEEEEEECCCCcccCEEEEEEEec----CcEE-E
Confidence 5678899999999995 788999999999988764 455555444446899999999999999999988 2333 7
Q ss_pred EEEEecceec
Q psy2441 202 MLYVKGTQVD 211 (212)
Q Consensus 202 ~l~v~~~~~p 211 (212)
.|.|...+.+
T Consensus 95 ~l~V~~~p~~ 104 (113)
T 2cpc_A 95 TVTVTEPPVR 104 (113)
T ss_dssp EEEEECCCCC
T ss_pred EEEEecCCch
Confidence 7777766543
No 288
>1pd6_A Cardiac MYBP-C;, myosin-binding protein C, cardiac-type, domain C2; IG domain, structural protein; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.54 E-value=8.5e-14 Score=85.34 Aligned_cols=87 Identities=22% Similarity=0.383 Sum_probs=66.4
Q ss_pred CccccCCcc-eeEecCCcEEEEEeeeeCCCCceEEEeCCEEecCCCCCceEEcCCCCceeEEEcCCCCCCCeeEEEEEEc
Q psy2441 113 PQITEAPST-KVVEISHTTVLHCSASGNPPPKISWIREMLPVDTSRNPRYNLLTSGAPGALQITNSIEEDQGKYECVAEN 191 (212)
Q Consensus 113 p~~~~~~~~-~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~n 191 (212)
|.|...+.. ..+.+|+.+.|.|.+ +.|.+.+.|++++..+... ..++.+..++....|.|.++..+|+|.|.|.|.|
T Consensus 16 p~f~~~~~~~~~v~~G~~v~L~C~~-~~p~~~v~W~k~g~~l~~~-~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~ 93 (104)
T 1pd6_A 16 TAFQKKLEPAYQVSKGHKIRLTVEL-ADHDAEVKWLKNGQEIQMS-GSKYIFESIGAKRTLTISQCSLADDAAYQCVVGG 93 (104)
T ss_dssp SSCSEECCSEEEEETTSCEEEEEEC-SSSSSCCEEEESSSEECCC-SSSSEEEEETTEEEEEECSCSSSSCEEEEEEETT
T ss_pred CEEEEcCCCcEEEecCCCEEEEEEE-cCCCCEEEEEECCEECCCC-CCeEEEEecCCEEEEEECCCCcccCEEEEEEECC
Confidence 566655555 779999999999999 7888999999999988764 2455555444346999999999999999999944
Q ss_pred ccccceecceEEEEe
Q psy2441 192 EVGTEYSPSTMLYVK 206 (212)
Q Consensus 192 ~~g~~~~~~~~l~v~ 206 (212)
.... +.|.|+
T Consensus 94 ----~~~~-~~l~V~ 103 (104)
T 1pd6_A 94 ----EKCS-TELFVK 103 (104)
T ss_dssp ----EEEC-CEEEEE
T ss_pred ----CcEE-EEEEEe
Confidence 3333 566664
No 289
>2cr6_A KIAA1556 protein, obscurin; IG-fold, immunoglobulin domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.54 E-value=3.7e-14 Score=88.65 Aligned_cols=90 Identities=17% Similarity=0.230 Sum_probs=71.5
Q ss_pred CccccCCcceeEecCCcEEEEEeeeeCCCCceEEEeCCEEecCCCCCceEEc-CCCCceeEEEcCCCCCCCeeEEEEEEc
Q psy2441 113 PQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREMLPVDTSRNPRYNLL-TSGAPGALQITNSIEEDQGKYECVAEN 191 (212)
Q Consensus 113 p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~-~~~~~~~l~i~~~~~~d~g~y~C~a~n 191 (212)
+.+...+....+.+|+.+.|.|.+.+.|.|.+.|++++..+... .++.+. .++....|.|.++..+|+|.|.|.+
T Consensus 14 ~~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~g~~l~~~--~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~-- 89 (115)
T 2cr6_A 14 VHIIEDLEDVDVQEGSSATFRCRISPANYEPVHWFLDKTPLHAN--ELNEIDAQPGGYHVLTLRQLALKDSGTIYFEA-- 89 (115)
T ss_dssp CEEEECCCEEEEETTSCEECCCEEESTTCCSCEEEESSCEECCS--SSCCBCCBTTTBCCBEECSCCTTTCEEEEEEE--
T ss_pred CeEeccCccEEEeCCCcEEEEEEEcCCCCCccEEEECCEECCCC--CcEEEEEcCCCEEEEEEcCCChhhCEEEEEEE--
Confidence 45666777788999999999999999999999999999988765 344333 2233468999999999999999994
Q ss_pred ccccceecceEEEEecce
Q psy2441 192 EVGTEYSPSTMLYVKGTQ 209 (212)
Q Consensus 192 ~~g~~~~~~~~l~v~~~~ 209 (212)
|..... +.|.|.+.+
T Consensus 90 --g~~~~~-~~L~V~~~p 104 (115)
T 2cr6_A 90 --GDQRAS-AALRVTEKP 104 (115)
T ss_dssp --TTEECC-EEEEEECCS
T ss_pred --CCeeEE-EEEEEECCC
Confidence 555555 788887654
No 290
>2a38_A Titin; Z1Z2, structural protein; 2.00A {Homo sapiens} PDB: 1ya5_A 2f8v_A
Probab=99.54 E-value=4.8e-14 Score=96.01 Aligned_cols=95 Identities=28% Similarity=0.398 Sum_probs=76.8
Q ss_pred CCccccCCcceeEecCCcEEEEEeeeeCCCCceEEEeCCEEecCCCCCceEEcCCCCceeEEEcCCCCCCCeeEEEEEEc
Q psy2441 112 FPQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREMLPVDTSRNPRYNLLTSGAPGALQITNSIEEDQGKYECVAEN 191 (212)
Q Consensus 112 ~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~n 191 (212)
+|.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+......++.....+....|.|.+++.+|+|.|.|.+.|
T Consensus 5 ~P~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n 84 (194)
T 2a38_A 5 APTFTQPLQSVVVLEGSTATFEAHISGFPVPEVSWFRDGQVISTSTLPGVQISFSDGRAKLTIPAVTKANSGRYSLKATN 84 (194)
T ss_dssp EEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEESSSBCCTTTSTTCEEEEETTEEEEEESSCCGGGCEEEEEEEEE
T ss_pred CCeEEccCCceEEECCCEEEEEEEEEecCCCEEEEEECCEEcccccCCceEEEeCCCEEEEEECCCCcccCEEEEEEEEc
Confidence 36777777778899999999999999999999999999988776532344433333347899999999999999999999
Q ss_pred ccccceecceEEEEec
Q psy2441 192 EVGTEYSPSTMLYVKG 207 (212)
Q Consensus 192 ~~g~~~~~~~~l~v~~ 207 (212)
..|..... ..+.|.+
T Consensus 85 ~~~~~~~~-~~l~v~~ 99 (194)
T 2a38_A 85 GSGQATST-AELLVKA 99 (194)
T ss_dssp TTEEEEEE-EEEEEEC
T ss_pred CCceEeEE-EEEEEcc
Confidence 98887766 7777764
No 291
>2e6q_A Obscurin-like protein 1; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.54 E-value=1.2e-13 Score=85.26 Aligned_cols=92 Identities=12% Similarity=0.117 Sum_probs=73.3
Q ss_pred CccccCCcceeEecCCcEEEEEeeeeCCCCceEEEeCCEEecCCC-CC-------ceEEcCCCCceeEEEcCCCCCCCee
Q psy2441 113 PQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREMLPVDTSR-NP-------RYNLLTSGAPGALQITNSIEEDQGK 184 (212)
Q Consensus 113 p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~-~~-------~~~~~~~~~~~~l~i~~~~~~d~g~ 184 (212)
|.|...+.+..+.+|+.+.|.|.+.+ .|.+.|++||..+..+. .. ++.+..++....|.|.++..+|+|.
T Consensus 9 ~~~~~~l~d~~v~eG~~a~f~C~vs~--~p~v~W~knG~~l~~~~~~~~~~~~~~r~~i~~~g~~~~L~I~~v~~~D~G~ 86 (112)
T 2e6q_A 9 ARLVAGLEDVQVYDGEDAVFSLDLST--IIQGTWFLNGEELKSNEPEGQVEPGALRYRIEQKGLQHRLILHAVKHQDSGA 86 (112)
T ss_dssp CCEEECCCCEEEETTCEEEEEEEESS--CCCCEEEESSCBCCSSCCCTTSCTTSCEEEECCBTTEEEEEEESCCSTTCSE
T ss_pred cEEecCCCCeEEcCCCcEEEEEEECC--CCeEEEEECCEECccCcccccccccccEEEEEeCCcEEEEEECCCCHHHCcc
Confidence 67777888899999999999999987 77899999999998752 11 7777666555689999999999999
Q ss_pred EEEEEEcccccceecceEEEEeccee
Q psy2441 185 YECVAENEVGTEYSPSTMLYVKGTQV 210 (212)
Q Consensus 185 y~C~a~n~~g~~~~~~~~l~v~~~~~ 210 (212)
|+|...+. .... +.|.|++.+.
T Consensus 87 Y~~~~~~~---~~ss-A~L~V~~~p~ 108 (112)
T 2e6q_A 87 LVGFSCPG---VQDS-AALTIQESSG 108 (112)
T ss_dssp EEEEEETT---EEEE-EEEEEECSSC
T ss_pred EEEEEECC---eeEE-EEEEEeCCCc
Confidence 98755542 3344 8888887654
No 292
>3m45_A Cell adhesion molecule 2; IG fold, dimer, disulfide bond, glycoprotein, immunoglobulin membrane, transmembrane; HET: NAG; 2.21A {Mus musculus}
Probab=99.54 E-value=8.9e-14 Score=85.75 Aligned_cols=94 Identities=18% Similarity=0.272 Sum_probs=70.7
Q ss_pred CccccCCcceeEecCCcEEEEEeeeeCCCCceEEEeCCE-EecCC-----CCCceEEcCC-CCceeEEEcCCCCCCCeeE
Q psy2441 113 PQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREML-PVDTS-----RNPRYNLLTS-GAPGALQITNSIEEDQGKY 185 (212)
Q Consensus 113 p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~-~~~~~-----~~~~~~~~~~-~~~~~l~i~~~~~~d~g~y 185 (212)
|.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++. .+... ...++..... .....|.|.+++.+|+|.|
T Consensus 7 p~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~D~G~Y 86 (108)
T 3m45_A 7 QGQFPLTQNVTVVEGGTAILTCRVDQNDNTSLQWSNPAQQTLYFDDKKALRDNRIELVRASWHELSISVSDVSLSDEGQY 86 (108)
T ss_dssp -CCCEECCCEEEETTSCEEEEEEESSCSSCCEEEECTTCCEEEETTEECSCCTTEEEEEESSSEEEEEECSCCGGGCEEE
T ss_pred CCccccCCeeEEEeCCcEEEEeEEcCCCccEEEEEcCCCceEEEcCCcccccCcEEEeecCCCcEEEEECCCChhHCeEE
Confidence 666667778889999999999999999999999999765 22211 1235544321 1247899999999999999
Q ss_pred EEEEEcccccceecceEEEEecc
Q psy2441 186 ECVAENEVGTEYSPSTMLYVKGT 208 (212)
Q Consensus 186 ~C~a~n~~g~~~~~~~~l~v~~~ 208 (212)
.|.+.| .|..... +.|.|.++
T Consensus 87 ~C~~~n-~~~~~~~-~~L~V~~~ 107 (108)
T 3m45_A 87 TCSLFT-MPVKTSK-AYLTVLGV 107 (108)
T ss_dssp EEEECS-SSCEEEE-EEEEEECC
T ss_pred EEEEEc-CCCcEEE-EEEEEEcC
Confidence 999999 7776666 77777654
No 293
>2dm7_A KIAA1556 protein; beta-sandwich, IG-fold, obscurin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2edl_A 2edw_A 2gqh_A 2edt_A 2edq_A 2edr_A
Probab=99.54 E-value=9.4e-14 Score=85.76 Aligned_cols=90 Identities=26% Similarity=0.408 Sum_probs=69.9
Q ss_pred CCCccccCCcceeEecCCcEEEEEeeeeCCCCceEEEeCCEEecCCCCCceEEcCCCCceeEEEcCCCCCCCeeEEEEEE
Q psy2441 111 GFPQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREMLPVDTSRNPRYNLLTSGAPGALQITNSIEEDQGKYECVAE 190 (212)
Q Consensus 111 ~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~ 190 (212)
.+|.+...+....+.+|+.+.|.|.+.+. |.+.|++++..+... .++....++....|.|.+++.+|+|.|.|.|.
T Consensus 7 ~pp~~~~~~~~~~v~~G~~v~l~C~~~~~--p~v~W~k~~~~~~~~--~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~ 82 (108)
T 2dm7_A 7 GPARFTQDLKTKEASEGATATLQCELSKV--APVEWKKGPETLRDG--GRYSLKQDGTRCELQIHDLSVADAGEYSCMCG 82 (108)
T ss_dssp CCCCBCSCCBCCEEETTSCEEEEEEBSSS--CCCEEESSSSBCCSS--SSCEEEEETTEEEEEESSCCTTTCSEEEEEET
T ss_pred CCCeeeecCCcEEEeCCCcEEEEEEeCCC--CeeEEEECCEECCCC--CCEEEEecCCEEEEEECCCCcccCEEEEEEEc
Confidence 44777777788889999999999999765 689999999877654 55555555444679999999999999999995
Q ss_pred cccccceecceEEEEecce
Q psy2441 191 NEVGTEYSPSTMLYVKGTQ 209 (212)
Q Consensus 191 n~~g~~~~~~~~l~v~~~~ 209 (212)
|. ... +.|.|.+.+
T Consensus 83 n~----~~~-~~l~V~~~p 96 (108)
T 2dm7_A 83 QE----RTS-ATLTVRALP 96 (108)
T ss_dssp TE----EEE-EECEEECCC
T ss_pred CC----EEE-EEEEEecCC
Confidence 53 333 667776644
No 294
>3bn9_D E2 FAB heavy chain; antibody-protease complex, protein-protein complex, enzyme- inhibitor complex, disease mutation, glycoprotein, hydrolase; 2.17A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 3kr3_H 2xtj_E
Probab=99.53 E-value=2.8e-14 Score=101.68 Aligned_cols=156 Identities=21% Similarity=0.324 Sum_probs=79.9
Q ss_pred CCccEEeeCCeEEEEcccCCCC--CCcEEEEeCC--EE---e---c---------CCCCCeeEEee-------------c
Q psy2441 36 PSTKVVEISHTTVLHCSASGNP--PPKISWIREM--LP---V---D---------TSRNPRYNLLT-------------S 83 (212)
Q Consensus 36 ~~~~~v~~g~~v~l~C~~~~~p--~~~v~W~k~g--~~---l---~---------~~~~~~~~~~~-------------~ 83 (212)
+....+.+|++++|.|.+.+.+ .+.+.|||.. .. + . .....|+.+.. .
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v 86 (257)
T 3bn9_D 7 SGGGLVKPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMSSL 86 (257)
T ss_dssp ECCEEECTTCEEEEEEEEESSCGGGCCEEEEEECTTSCEEEEEEECSSSCCEEECGGGTTTEEEEEETTTTEEEEEEESC
T ss_pred cCCEEEcCCCcEEEEEEeccccCCCceEEEEEECCCCCeEEEEEEecCCCceecCcccCCceEEEecCCCCEEEEEECCC
Confidence 4456889999999999998765 5679999853 11 1 0 00124444432 1
Q ss_pred --CCCCeEEEeeeCCcc-------------------ceeEEeecCCCCCCCccccCCcceeEecCCcEEEEEeeeeC-CC
Q psy2441 84 --GAPGTYIKIKPNLFS-------------------PLSVYSADKIPPGFPQITEAPSTKVVEISHTTVLHCSASGN-PP 141 (212)
Q Consensus 84 --~~~g~~l~i~~~~~~-------------------~~~v~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~-p~ 141 (212)
.|.|.|.|....... .+.|.. .+..+|.+........+..|+.+.|.|.+.+. |.
T Consensus 87 ~~~DsG~Y~C~~~~~~g~~~~~~~~~~~~~~~~~~t~L~V~~---~~~~~P~v~~~~p~~~~~~g~~v~L~C~~~g~~P~ 163 (257)
T 3bn9_D 87 RAEDTAVYYCARPYLTYPQRRGPQNVSPFDNWGQGTMVTVSS---ASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPE 163 (257)
T ss_dssp CGGGCEEEEEEEECCSSTTSCCCCTTCCEEEECCCEEEEECS---SCCBCCEECCCCC-----------CCCEEEEEBSS
T ss_pred ChhhCEEEEEEEecCCCcccccccccceeeeeCCcEEEEecC---CCCcCCcEEEecCcccccCCCcEEEEEEEeeEECC
Confidence 377778887655321 122211 11223544433222235679999999999885 77
Q ss_pred C-ceEEEeCCEEecCCCCCceEEcCCCC---ceeEEEcCCCCCCCeeEEEEEEcccccc
Q psy2441 142 P-KISWIREMLPVDTSRNPRYNLLTSGA---PGALQITNSIEEDQGKYECVAENEVGTE 196 (212)
Q Consensus 142 ~-~i~W~~~~~~~~~~~~~~~~~~~~~~---~~~l~i~~~~~~d~g~y~C~a~n~~g~~ 196 (212)
+ .+.|++++..+........ ...++. .+.|.|.+....| |.|+|.|.|.....
T Consensus 164 pi~v~W~k~g~~~~~~~~~~~-~~~~g~y~~~s~L~I~~~~~~~-g~YtC~v~n~~~~~ 220 (257)
T 3bn9_D 164 PVTVSWNSGALTSGVHTFPAV-LQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNT 220 (257)
T ss_dssp CCEEEETTTTCCSSCEECCCE-ECTTSCEEEEEECCCC--------CEEEEEEEGGGTE
T ss_pred CcEEEEeeCCCcCCcEecCCe-EcCCCCEEEEEEEEEcccccCC-CeEEEEEEecCCCc
Confidence 7 9999998875322101111 111111 2467788777777 99999999965443
No 295
>1gl4_B Basement membrane-specific heparan sulfate proteoglycan core protein; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: b.1.1.4
Probab=99.52 E-value=5e-14 Score=85.44 Aligned_cols=82 Identities=23% Similarity=0.337 Sum_probs=64.1
Q ss_pred CCcceeEecCCcEEEEEeee-eCCCCceEEEeCCEEecCCCCCceEEcCCCCceeEEEcCCCCCCCeeEEEEEEcccccc
Q psy2441 118 APSTKVVEISHTTVLHCSAS-GNPPPKISWIREMLPVDTSRNPRYNLLTSGAPGALQITNSIEEDQGKYECVAENEVGTE 196 (212)
Q Consensus 118 ~~~~~~~~~g~~~~l~C~~~-~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~n~~g~~ 196 (212)
.+....+.+|+.+.|.|.+. +.|.+.+.|++++...... . ....+ +.|.|.++..+|+|.|.|.|.|..|..
T Consensus 16 ~~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~k~~~~~~~~---~-~~~~~---~~L~i~~v~~~D~G~Y~C~a~n~~g~~ 88 (98)
T 1gl4_B 16 EQRSQSVRPGADVTFICTAKSKSPAYTLVWTRLHNGKLPS---R-AMDFN---GILTIRNVQPSDAGTYVCTGSNMFAMD 88 (98)
T ss_dssp SCCEEEECTTCCEEEEEEEEESSSCCEEEEEEGGGBCCCT---T-EEEET---TEEEECSCCGGGCEEEEEEEECSSCEE
T ss_pred CCCCeEEecCCCEEEEEeCCCCCCCcEEEEEeCCCCCCCc---e-eecCC---CEEEEeCCChhhCEEEEEEecCCCCcc
Confidence 34556789999999999998 6899999999975433221 1 12223 689999999999999999999999988
Q ss_pred eecceEEEEec
Q psy2441 197 YSPSTMLYVKG 207 (212)
Q Consensus 197 ~~~~~~l~v~~ 207 (212)
... +.|.|++
T Consensus 89 ~~~-~~l~V~~ 98 (98)
T 1gl4_B 89 QGT-ATLHVQV 98 (98)
T ss_dssp EEE-EEEEEC-
T ss_pred ccE-EEEEEeC
Confidence 776 7777753
No 296
>2j8h_A Titin, connectin; cardiomyopathy, nuclear protein, serine/threonine-protein KI LIMB-girdle muscular dystrophy, phosphorylation; 1.99A {Homo sapiens} PDB: 2j8o_A 2ill_A
Probab=99.52 E-value=2.5e-13 Score=92.68 Aligned_cols=95 Identities=22% Similarity=0.374 Sum_probs=76.7
Q ss_pred CCccccCCcceeEecCCcEEEEEeeeeCCCCceEEEeCCEEecCCCCCceEEcC-CCCceeEEEcCCCCCCCeeEEEEEE
Q psy2441 112 FPQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREMLPVDTSRNPRYNLLT-SGAPGALQITNSIEEDQGKYECVAE 190 (212)
Q Consensus 112 ~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~-~~~~~~l~i~~~~~~d~g~y~C~a~ 190 (212)
+|.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+... ..++.... .++...|.|.+++.+|+|.|.|.+.
T Consensus 4 ~P~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~-~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~ 82 (197)
T 2j8h_A 4 APHFKEELRNLNVRYQSNATLVCKVTGHPKPIVKWYRQGKEIIAD-GLKYRIQEFKGGYHQLIIASVTDDDATVYQVRAT 82 (197)
T ss_dssp CCEEEECCCCEEEETTSCEEEEEEEECSSCCEEEEEETTEECCCC-SSSEEEEEETTTEEEEEECSCCGGGCSEEEEEEE
T ss_pred CCEEEEcCCccEEcCCCEEEEEEEEeecCCCEEEEEECCEECccC-CCcEEEEEcCCCEEEEEECcCCHHhCEEEEEEEE
Confidence 477887888888999999999999999999999999999888754 23443322 2323599999999999999999999
Q ss_pred cccccceecceEEEEecc
Q psy2441 191 NEVGTEYSPSTMLYVKGT 208 (212)
Q Consensus 191 n~~g~~~~~~~~l~v~~~ 208 (212)
|..|..... +.|.|...
T Consensus 83 n~~g~~~~~-~~l~V~~~ 99 (197)
T 2j8h_A 83 NQGGSVSGT-ASLEVEVP 99 (197)
T ss_dssp ETTEEEEEE-EEEEEEEE
T ss_pred ECCCceeEE-EEEEEcCC
Confidence 998887666 77777654
No 297
>3so5_A LIG-3, leucine-rich repeats and immunoglobulin-like DOMA protein 3; structural genomics, joint center for struct genomics, JCSG; HET: MLY MSE; 1.70A {Mus musculus}
Probab=99.52 E-value=1.4e-13 Score=85.30 Aligned_cols=94 Identities=23% Similarity=0.412 Sum_probs=69.5
Q ss_pred CCccccCCcceeEecCCcEEEEEeeeeCC--CCceEEEeCCEEecCCCC---CceEEcCC---CCceeEEEcCCCCCCCe
Q psy2441 112 FPQITEAPSTKVVEISHTTVLHCSASGNP--PPKISWIREMLPVDTSRN---PRYNLLTS---GAPGALQITNSIEEDQG 183 (212)
Q Consensus 112 ~p~~~~~~~~~~~~~g~~~~l~C~~~~~p--~~~i~W~~~~~~~~~~~~---~~~~~~~~---~~~~~l~i~~~~~~d~g 183 (212)
+|.+...+....+.+|+.+.|.|.+.+.+ .+.+.|++++..+..... .++....+ .....|.|.++..+|+|
T Consensus 10 ~P~i~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G 89 (112)
T 3so5_A 10 XPQITVQPETQSAIXGSDVSFTCSAASSSDSPMTFAWXXDNEALQDAEMENYAHLRAQGGELMEYTTILRLRNVEFTSEG 89 (112)
T ss_dssp SCEEEECCCCEEECTTCCEEEEEEEEESCCCCCEEEEEETTEECTTCEEEEEEETTGGGSSCEEEEEEEEECSCCGGGCE
T ss_pred CCeEEeCCCCcEEECCCCEEEEEEEecCCCCCEEEEEccCCcccccccccceeeeeccCCCccccceEEEEeccccccCC
Confidence 37777777778899999999999998654 579999999988765311 01111100 00268999999999999
Q ss_pred eEEEEEEcccccceecceEEEE
Q psy2441 184 KYECVAENEVGTEYSPSTMLYV 205 (212)
Q Consensus 184 ~y~C~a~n~~g~~~~~~~~l~v 205 (212)
.|.|.|.|..|...+..+.|.|
T Consensus 90 ~Y~C~a~n~~g~~~s~~~~l~V 111 (112)
T 3so5_A 90 XYQCVISNHFGSSYSVXAXLTI 111 (112)
T ss_dssp EEEEEEEETTEEEECCCEEEEE
T ss_pred eEEEEEEeCCCcEEEeEEEEEe
Confidence 9999999999985433377765
No 298
>1wwc_A Protein (NT-3 growth factor receptor TRKC); TRK receptor, receptor tyrosine kinase, 3D-domain swapping, transferase; 1.90A {Homo sapiens} SCOP: b.1.1.4
Probab=99.51 E-value=1.2e-13 Score=86.74 Aligned_cols=80 Identities=21% Similarity=0.408 Sum_probs=61.4
Q ss_pred CcEEEEEeeeeCCCCceEEEeCCEEecCCCCCceEEcCCC--CceeEEEcCCCCCCCeeEEEEEEcccccceecceEEEE
Q psy2441 128 HTTVLHCSASGNPPPKISWIREMLPVDTSRNPRYNLLTSG--APGALQITNSIEEDQGKYECVAENEVGTEYSPSTMLYV 205 (212)
Q Consensus 128 ~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~--~~~~l~i~~~~~~d~g~y~C~a~n~~g~~~~~~~~l~v 205 (212)
....|.|.+.|+|.|.+.|++++..+......++....++ ..+.|.|.++..+|+|.|.|.|.|..|..... +.|.|
T Consensus 21 ~~~~l~C~~~g~P~p~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~-~~l~v 99 (118)
T 1wwc_A 21 LEHCIEFVVRGNPPPTLHWLHNGQPLRESKIIHVEYYQEGEISEGCLLFNKPTHYNNGNYTLIAKNPLGTANQT-INGHF 99 (118)
T ss_dssp CEEEEEEEEECSSCCEEEEEETTEECCCSSSEEEEEEECSSEEEEEEEEESCCGGGCEEEEEEEEETTEEEEEE-EEECC
T ss_pred cceEEEEEeeeeCCCeEEEEECCEECCCCCceeEEEeccCccccEEEEECCCChhcCEEEEEEEECCCCeEeeE-EEEEE
Confidence 5678899999999999999999998877522233222211 13689999999999999999999999988766 66655
Q ss_pred ecc
Q psy2441 206 KGT 208 (212)
Q Consensus 206 ~~~ 208 (212)
...
T Consensus 100 ~~~ 102 (118)
T 1wwc_A 100 LKE 102 (118)
T ss_dssp SCC
T ss_pred ccC
Confidence 443
No 299
>3lcy_A Titin; A-BAND, IG tandem domains, ATP-binding, calmodulin-BI cardiomyopathy, disease mutation, disulfide bond, immunoglo domain, isopeptide bond; 2.50A {Homo sapiens}
Probab=99.51 E-value=2.8e-13 Score=92.31 Aligned_cols=95 Identities=27% Similarity=0.510 Sum_probs=78.5
Q ss_pred CCccccCCcceeEecCCcEEEEEeeeeCCCCceEEEeCCEEecCCCCCceEEcCCCCceeEEEcCCCCCCCeeEEEEEEc
Q psy2441 112 FPQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREMLPVDTSRNPRYNLLTSGAPGALQITNSIEEDQGKYECVAEN 191 (212)
Q Consensus 112 ~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~n 191 (212)
+|.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+... .++....++....|.|.++..+|+|.|.|.+.|
T Consensus 7 ~P~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~--~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n 84 (197)
T 3lcy_A 7 APGIRKEMKDVTTKLGEAAQLSCQIVGRPLPDIKWYRFGKELIQS--RKYKMSSDGRTHTLTVMTEEQEDEGVYTCIATN 84 (197)
T ss_dssp EEEEEECCCCEEEETTSEEEEEEEEEEESCCEEEEEETTEEECCC--SSEEEEESSSEEEEEEECCSGGGCEEEEEEEEC
T ss_pred CCcccccCCceEEeCCCcEEEEEEEecCCCCEEEEEECCEECCCC--ccEEEEeCCCEEEEEEecCCccCCEEEEEEEEC
Confidence 367777777888999999999999999999999999999988764 555555554446899999999999999999999
Q ss_pred ccccceecceEEEEecce
Q psy2441 192 EVGTEYSPSTMLYVKGTQ 209 (212)
Q Consensus 192 ~~g~~~~~~~~l~v~~~~ 209 (212)
..|..... ..+.|...+
T Consensus 85 ~~~~~~~~-~~l~v~~~p 101 (197)
T 3lcy_A 85 EVGEVETS-SKLLLQATP 101 (197)
T ss_dssp SSCEEEEE-EEEEEEEEE
T ss_pred CCCceeEE-EEEEEEcCC
Confidence 98887766 777776543
No 300
>3qhz_H Human monoclonal antibody DEL2D1, FAB heavy chain; immunoglobulin, immune recognition, influenza A hemagglutini system; 1.55A {Homo sapiens} PDB: 3lzf_H* 3qrg_H* 3mod_H 3mob_H 3moa_H 3lev_H* 3idg_B 3d0l_B 3d0v_B 3idi_B 3idj_B 3idm_B* 3idn_B* 1tjg_H* 1tjh_H* 1tji_H* 2pr4_H 3drq_B 2p8m_B 2p8p_B ...
Probab=99.49 E-value=1.8e-13 Score=96.06 Aligned_cols=164 Identities=20% Similarity=0.249 Sum_probs=90.2
Q ss_pred CCccEEeeCCeEEEEcccCCCC--CCcE--EEEeCC-----EEe-----c---------CCCCCeeEEeec---------
Q psy2441 36 PSTKVVEISHTTVLHCSASGNP--PPKI--SWIREM-----LPV-----D---------TSRNPRYNLLTS--------- 83 (212)
Q Consensus 36 ~~~~~v~~g~~v~l~C~~~~~p--~~~v--~W~k~g-----~~l-----~---------~~~~~~~~~~~~--------- 83 (212)
+....+.+|++++|.|.+.+.+ ...+ .|||.. ..+ . .....|+.+...
T Consensus 7 ~~~~~v~~G~~v~L~C~~~~~~~~~~~i~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~ 86 (232)
T 3qhz_H 7 SGPALVKPTQTLTLTCSFSGFSLSTSGMSVSWIRQPPGKALEWLALIDWDDDTYYITYSSSLKTRLTISKDTSKSQVVLT 86 (232)
T ss_dssp ECCSEECTTSCEEEEEEEESCGGGCTTCEEEEEEECTTSCCEEEEEEESSSSCEEECCCTTTTTTEEEEEETTTTEEEEE
T ss_pred CCCEEECCCCcEEEEEEEeCcccccceeEeEEEEECCCCCcEEEEEEECCCCccccccCccccCceEEEeccCCCEEEEE
Confidence 3457799999999999996532 2445 999831 111 0 011234444321
Q ss_pred ------CCCCeEEEeeeCC--------------ccceeEEeecCCCCCCCccccCCcceeEecCCcEEEEEeeeeCCC--
Q psy2441 84 ------GAPGTYIKIKPNL--------------FSPLSVYSADKIPPGFPQITEAPSTKVVEISHTTVLHCSASGNPP-- 141 (212)
Q Consensus 84 ------~~~g~~l~i~~~~--------------~~~~~v~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~-- 141 (212)
.|.|.|.|..... ...+.|.. .....|.+........+..|+.+.|.|.+.+.++
T Consensus 87 I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~l~V~~---~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~~~~P~~ 163 (232)
T 3qhz_H 87 MTNMDPVDTATYYCARTLRVSGDYVRDFDLWGRGTLVTVSS---ASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEP 163 (232)
T ss_dssp ECSCCGGGCEEEEEEEECCC---CCCCCCEECCCEEEEECS---SCCBCCEEEEECC-------CEEEEEEEEEEEBSSC
T ss_pred ECcCChhhCEEEEEEEeeccCccccccceeeCCCeEEEEec---CCCCCCEEEEecccccccCCCcEEEEEEEeeEeCCC
Confidence 3777777766532 11222221 1222354442222234456999999999987543
Q ss_pred CceEEEeCCEEecCCCCCceEEcCCCC---ceeEEEcCCCCCCCeeEEEEEEcccccceecceEEEE
Q psy2441 142 PKISWIREMLPVDTSRNPRYNLLTSGA---PGALQITNSIEEDQGKYECVAENEVGTEYSPSTMLYV 205 (212)
Q Consensus 142 ~~i~W~~~~~~~~~~~~~~~~~~~~~~---~~~l~i~~~~~~d~g~y~C~a~n~~g~~~~~~~~l~v 205 (212)
..+.|++++..+........ ...++. .+.|.|......| |.|+|.|.|..+..... ..+.+
T Consensus 164 ~~v~W~~~g~~~~~~~~~~~-~~~~g~~~~~s~L~i~~~~~~~-g~ytC~v~~~~~~~~~~-~~l~~ 227 (232)
T 3qhz_H 164 VTVSWNSGALTSGVHTFPAV-LQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVD-KRVEP 227 (232)
T ss_dssp CEEEEGGGTBCTTEEECCCE-ECTTSCEEEEEEEEEEGGGGGT-CCCEEEEEEGGGTEEEE-EECCC
T ss_pred eEEEEEECCEecceeeccce-eCCCCCEEEEEEEEEchhhcCC-CEEEEEEEeCCCCccEE-EEeCC
Confidence 36779998853321100001 111111 2578888888888 99999999988766554 54444
No 301
>3tv3_H PGT128 heavy chain, IG gamma-1 chain C region; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_H* 3twc_H* 3tje_H* 3thm_H* 4fqq_H 2xzc_H* 2xza_H* 3b2u_H* 3b2v_H* 3mly_H 3mlz_H 4fq2_H 2ykl_H* 3tnm_H 4fqc_H* 4fq1_H* 2yk1_H* 3mlx_H 2jix_D 2vxq_H ...
Probab=99.48 E-value=4.3e-13 Score=94.61 Aligned_cols=164 Identities=21% Similarity=0.271 Sum_probs=94.3
Q ss_pred CCccEEeeCCeEEEEcccCCCC----CCcEEEEeCC-----EEe---c------C--------CCCCeeEEeec------
Q psy2441 36 PSTKVVEISHTTVLHCSASGNP----PPKISWIREM-----LPV---D------T--------SRNPRYNLLTS------ 83 (212)
Q Consensus 36 ~~~~~v~~g~~v~l~C~~~~~p----~~~v~W~k~g-----~~l---~------~--------~~~~~~~~~~~------ 83 (212)
+..+.+.+|+.++|.|.+.+.+ ...+.|||.. ..+ . . ....|+.+...
T Consensus 7 ~~~~~v~~G~~v~L~C~~~~~~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~ 86 (239)
T 3tv3_H 7 SGPTLVEASETLSLTCAVSGDSTAACNSFWGWVRQPPGKGLEWVGSLSHCASYWNRGWTYHNPSLKSRLTLALDTPKNLV 86 (239)
T ss_dssp ESCSEECTTSCEEEEEEEESSCTTSSSCEEEEEEECTTSCCEEEEEEECCCCTTSSCEEEECTTTGGGEEEEEEGGGTEE
T ss_pred CCCEEEcCCCCEEEEEEEcCCcccccceEEEEEEECCCCCcEEEEEEecccccccCCceecCccccCCEEEEEECCCCEE
Confidence 5567899999999999997654 3479999832 111 1 0 11245544321
Q ss_pred ---------CCCCeEEEeeeCCc-------------------cceeEEeecCCCCCCCccccCCcceeEecCCcEEEEEe
Q psy2441 84 ---------GAPGTYIKIKPNLF-------------------SPLSVYSADKIPPGFPQITEAPSTKVVEISHTTVLHCS 135 (212)
Q Consensus 84 ---------~~~g~~l~i~~~~~-------------------~~~~v~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~ 135 (212)
+|.|.|.|...... ..+.|.. .+...|.+...+....+..|+.+.|.|.
T Consensus 87 ~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~w~~~~~~~~~~~~t~l~V~~---~~~~~P~v~~~~~~~~~~~g~~v~l~C~ 163 (239)
T 3tv3_H 87 FLKLNSVTAADTATYYCARFGGEVLRYTDWPKPAWVDLWGRGTLVTVSS---ASTKGPSVFPLAPSSKSTSGGTAALGCL 163 (239)
T ss_dssp EEEECSCCGGGCEEEEEEEEEEECSSCSSSCEEEEEEEECCCEEEEECC---CCCBCCEEEEECCCCCC--TTEEEEEEE
T ss_pred EEEECCCChhhCEEEEEEEecCccccccccccccceeeeCCCcEEeecc---CCCcCCEEEEECCChhhccCCcEEEEEE
Confidence 37777777654321 1122211 1222354443333333456999999999
Q ss_pred eee-CCCC-ceEEEeCCEEecCCCCCceEEcCCCC---ceeEEEcCCCCCCCeeEEEEEEcccccceecceEEEE
Q psy2441 136 ASG-NPPP-KISWIREMLPVDTSRNPRYNLLTSGA---PGALQITNSIEEDQGKYECVAENEVGTEYSPSTMLYV 205 (212)
Q Consensus 136 ~~~-~p~~-~i~W~~~~~~~~~~~~~~~~~~~~~~---~~~l~i~~~~~~d~g~y~C~a~n~~g~~~~~~~~l~v 205 (212)
+.+ .|.+ .+.|++++..+........ ...++. .+.|.|......| |.|+|.|.|..+..... ..|.+
T Consensus 164 ~~~~~p~~~~v~W~~~g~~~~~~~~~~~-~~~~g~~~~~s~L~i~~~~~~~-~~ytC~v~h~~~~~~~~-~~l~~ 235 (239)
T 3tv3_H 164 VKDYFPEPVTVSWNSGALTSGVHTFPAV-LQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVD-KRVEP 235 (239)
T ss_dssp EEEEBSSCCEEEEGGGTBCTTEEECCCE-ECTTSCEEEEEEEEEEGGGTTT-CCCEEEEEEGGGTEEEE-EECCC
T ss_pred EeeEeCCCeEEEEEECCccCceEecCce-ECCCCCEEEEEEEEEchhhcCC-CEEEEEEEECCCCceEE-EEecc
Confidence 988 4544 5889998864321100001 111111 2568888888888 99999999987766544 44433
No 302
>2c5d_C AXL oncogene, tyrosine-protein kinase receptor UFO; signaling protein/receptor, growth regulation/complex, vitamin K-dependent protein; HET: NAG; 3.3A {Homo sapiens}
Probab=99.48 E-value=4.6e-13 Score=91.30 Aligned_cols=97 Identities=19% Similarity=0.291 Sum_probs=75.1
Q ss_pred CCccccCCcceeEecCCcEEEEEeee-eCCCCceEEEeCCEEecCCCCCceEEcCCCC-------ceeEEEcCCCCCCCe
Q psy2441 112 FPQITEAPSTKVVEISHTTVLHCSAS-GNPPPKISWIREMLPVDTSRNPRYNLLTSGA-------PGALQITNSIEEDQG 183 (212)
Q Consensus 112 ~p~~~~~~~~~~~~~g~~~~l~C~~~-~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~-------~~~l~i~~~~~~d~g 183 (212)
+|.|...+....+.+|+.+.|.|.+. +.|.+.+.|++++..+......++....... ...|.|.+++.+|+|
T Consensus 2 ~~~~~~~p~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G 81 (195)
T 2c5d_C 2 ESPFVGNPGNITGARGLTGTLRCQLQVQGEPPEVHWLRDGQILELADSTQTQVPLGEDEQDDWIVVSQLRITSLQLSDTG 81 (195)
T ss_dssp CCSEEECCCCEEECTTCCEEEEEEEEEESSCCCCEEEETTEECCSCEEEEEEEECSSSTTSEEEEEEEEEESSCCSTTCE
T ss_pred CCeeccChhheEEecCCcEEEecccccCCCCcEEEEEECCEEcccCCCCceEEEEccccccceeeccEEEEEeccccCCc
Confidence 36777888888999999999999999 9999999999999988764212232222211 368999999999999
Q ss_pred eEEEEEEcccccceecceEEEEecc
Q psy2441 184 KYECVAENEVGTEYSPSTMLYVKGT 208 (212)
Q Consensus 184 ~y~C~a~n~~g~~~~~~~~l~v~~~ 208 (212)
.|.|.+.|..|......+.|.|...
T Consensus 82 ~Y~C~~~~~~~~~~~~~~~l~V~~~ 106 (195)
T 2c5d_C 82 QYQCLVFLGHQTFVSQPGYVGLEGL 106 (195)
T ss_dssp EEEEEEEETTEEEECCCEEEEECCS
T ss_pred EEEEEEEeCCCceecccEEEEEecC
Confidence 9999999987766544467776554
No 303
>3s35_X Vascular endothelial growth factor receptor 2; antibody, KDR, VEGF receptor, cancer, immune system-transfer complex; HET: NAG; 2.20A {Homo sapiens} PDB: 3s36_X 3s37_X
Probab=99.48 E-value=3.2e-13 Score=85.23 Aligned_cols=88 Identities=19% Similarity=0.236 Sum_probs=62.9
Q ss_pred ceeEecCCcEEEEEeeeeC--CCCceEEEeCCEEecCC---CCCceEEcCC---CCceeEEEcCCCCCCCeeEEEEEEcc
Q psy2441 121 TKVVEISHTTVLHCSASGN--PPPKISWIREMLPVDTS---RNPRYNLLTS---GAPGALQITNSIEEDQGKYECVAENE 192 (212)
Q Consensus 121 ~~~~~~g~~~~l~C~~~~~--p~~~i~W~~~~~~~~~~---~~~~~~~~~~---~~~~~l~i~~~~~~d~g~y~C~a~n~ 192 (212)
...+.+|+.+.|.|.+.+. |.+.+.|++++..+... ...+...... ...+.|.|.+++.+|+|.|+|.|.|.
T Consensus 17 ~v~v~~G~~v~L~C~~~g~p~~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~ 96 (122)
T 3s35_X 17 GIELSVGEKLVLNCTARTELNVGIDFNWEYPSSKHQHKKLVNRDLKTQSGSEMKKFLSTLTIDGVTRSDQGLYTCAASSG 96 (122)
T ss_dssp CEEEEETCCEEEEEEEEECTTCCCEEEEECSCTTCCHHHHBCCSCCEEEETTEEEEEEEEEESSCCGGGCEEEEEEEECS
T ss_pred CEEEecCCeEEEEEEEEcCCCCcEEEEEECCCcccCCceeeeeccccccCCceeeEEEEEEECCCCcccCEEEEEEEccC
Confidence 3478889999999999984 45689999987643210 0111111110 01268999999999999999999999
Q ss_pred cccceecceEEEEecce
Q psy2441 193 VGTEYSPSTMLYVKGTQ 209 (212)
Q Consensus 193 ~g~~~~~~~~l~v~~~~ 209 (212)
.|..... +.|.|.+++
T Consensus 97 ~g~~~~~-~~l~V~~~p 112 (122)
T 3s35_X 97 LMTKKNS-TFVRVHEKP 112 (122)
T ss_dssp SCEEEEE-EEEEEEEEE
T ss_pred CCceEEE-EEEEEeccC
Confidence 9988766 777776643
No 304
>1bec_A 14.3.D T cell antigen receptor; T cell receptor; 1.70A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1jck_A 1l0x_A 1sbb_A 1l0y_A 3c6l_B 1mwa_B* 1g6r_B* 1tcr_B* 2ckb_B 2q86_B* 1lp9_F 2j8u_F 2jcc_F 2uwe_F 3mbe_D* 1d9k_B* 2aq3_A 3mc0_A 3byt_A 3bzd_A ...
Probab=99.48 E-value=6.7e-13 Score=93.49 Aligned_cols=160 Identities=17% Similarity=0.289 Sum_probs=92.1
Q ss_pred EEeCCCccEEeeCCeEEEEcccCCCCCCcEEEEeCC--EE---ec----------CCCCCeeEEe------------ec-
Q psy2441 32 ITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREM--LP---VD----------TSRNPRYNLL------------TS- 83 (212)
Q Consensus 32 ~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~k~g--~~---l~----------~~~~~~~~~~------------~~- 83 (212)
+...|..+.+.+|+.++|.|.+. .+.+.+.|||++ .. +. .....|+.+. ..
T Consensus 2 v~q~p~~v~v~~G~~v~L~C~~~-~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~R~~~~~~~~~~~~L~I~~v~ 80 (238)
T 1bec_A 2 VTQSPRNKVAVTGGKVTLSCQQT-NNHNNMYWYRQDTGHGLRLIHYSYGAGSTEKGDIPDGYKASRPSQEQFSLILELAT 80 (238)
T ss_dssp EEEECSEEEEETTCCEEEEEEES-SCCSEEEEEEECTTSCEEEEEEEEETTEEEECSCCTTCEEECCSSSEEEEEESSCC
T ss_pred cccCCCeeEEeCCCcEEEEEEeC-CCCceEEEEEECCCCCEEEEEEEeCCCcccCCCccceEEEEecCCCEEEEEEecCC
Confidence 34567788999999999999985 357789999853 11 10 0012333332 11
Q ss_pred -CCCCeEEEeeeCCc-----------cceeEEeecCCCCCCCcccc-CCcceeEecCCcEEEEEeeeeC-CCC-ceEEEe
Q psy2441 84 -GAPGTYIKIKPNLF-----------SPLSVYSADKIPPGFPQITE-APSTKVVEISHTTVLHCSASGN-PPP-KISWIR 148 (212)
Q Consensus 84 -~~~g~~l~i~~~~~-----------~~~~v~~~~~~~~~~p~~~~-~~~~~~~~~g~~~~l~C~~~~~-p~~-~i~W~~ 148 (212)
.|.|.|.|...... ..+.|..... ...+|.+.. .+....+..|+.+.|.|.+.+. |.+ .+.|++
T Consensus 81 ~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~-~~~~P~v~~~~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~~ 159 (238)
T 1bec_A 81 PSQTSVYFCASGGGRGSYAEQFFGPGTRLTVLEDLR-QVTPPKVSLFEPSKAEIANKQKATLVCLARGFFPDHVELSWWV 159 (238)
T ss_dssp GGGCEEEEEEEESCTTCGGGCEECCCEEEEEESCGG-GCBCCEEEEECCCSTTCSSSCSCSEEEEEEEEBSCCEEEEEEE
T ss_pred cccCEEEEEEEecCCCCccccccCCCEEEEEeccCC-CCCCCceEEECCChHHcccCCceEEEEEEeeEeCCCcEEEEEE
Confidence 37888888776531 1233332100 011244433 2333345579999999999985 655 999999
Q ss_pred CCEEecCCCC--CceEEcCCCC---ceeEEEcCCCCCC-CeeEEEEEEccc
Q psy2441 149 EMLPVDTSRN--PRYNLLTSGA---PGALQITNSIEED-QGKYECVAENEV 193 (212)
Q Consensus 149 ~~~~~~~~~~--~~~~~~~~~~---~~~l~i~~~~~~d-~g~y~C~a~n~~ 193 (212)
++..+..... .......++. ...|.|......| .|.|+|.|.|..
T Consensus 160 ~g~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~~~~ytC~v~~~~ 210 (238)
T 1bec_A 160 NGKEVHSGVSTDPQAYKESNYSYCLSSRLRVSATFWHNPRNHFRCQVQFHG 210 (238)
T ss_dssp TTEEECTTEEECSSCEEEETTEEEEEEEECCCHHHHTCTTCEEEEEEEECC
T ss_pred CCEECCCceecccceEeCCCCCEEEEEEEEEcHHHhccCCCeEEEEEEcCC
Confidence 9988765310 0111111210 1233343333333 678999999974
No 305
>1iam_A ICAM-1, CD54, intercellular adhesion molecule-1; rhinovirus receptor, cell adhesion, integrin ligand, glycopr LFA-1 ligand, immunoglobulin fold; HET: NAG; 2.10A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ic1_A* 1d3l_A 1d3e_I 1d3i_I 3tcx_A
Probab=99.47 E-value=2.7e-12 Score=86.29 Aligned_cols=154 Identities=15% Similarity=0.236 Sum_probs=96.8
Q ss_pred EEeCCCccEEeeCCeEEEEcccCCCCCCcEEEEe--CCEEe-cCCCC-CeeEEeecCCCCeEEEeeeC------Ccccee
Q psy2441 32 ITEAPSTKVVEISHTTVLHCSASGNPPPKISWIR--EMLPV-DTSRN-PRYNLLTSGAPGTYIKIKPN------LFSPLS 101 (212)
Q Consensus 32 ~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~k--~g~~l-~~~~~-~~~~~~~~~~~g~~l~i~~~------~~~~~~ 101 (212)
+.+.|....|.+|+++.|.|.+....+..+.|.- ++..+ ..... ..+.+....++|.|.|..+. ....++
T Consensus 2 v~v~P~~~~V~~G~Sv~l~Cs~~c~~p~~~~~~t~l~~~~~~~~~~~~~~l~l~~vs~~g~y~C~~~c~~~~~~~~~~l~ 81 (185)
T 1iam_A 2 TSVSPSKVILPRGGSVLVTCSTSCDQPKLLGIETPLPKKELLLPGNNRKVYELSNVQEDSQPMCYSNCPDGQSTAKTFLT 81 (185)
T ss_dssp EEEESSEEEEETTEEEEEEEEECSSSCSEEEEECSSCEEEECSSSSSEEEEEEEEECSCBCCEEEEECSSCEEEEECEEE
T ss_pred eEEECCCcEEeCCCCEEEEEEccCCCCccceEEeeCCCccEeccCCceeEEEEEecCcCCEEEEEEECCCCceEEEEEEE
Confidence 3456677889999999999999753333366652 22233 22111 34555555445889998765 344555
Q ss_pred EEeecCCCCCCCccccCCcceeEecCCcEEEEEeeeeC-CCC--ceEEEeCCEEecCCCCCceEEcCCCCceeEEEcCCC
Q psy2441 102 VYSADKIPPGFPQITEAPSTKVVEISHTTVLHCSASGN-PPP--KISWIREMLPVDTSRNPRYNLLTSGAPGALQITNSI 178 (212)
Q Consensus 102 v~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~-p~~--~i~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~ 178 (212)
|+.. | ..+...+....+.+|+.+.|.|.+.+. |.. .|.|++++..+.... ........+|.+....
T Consensus 82 V~~~----P--~~v~i~~~~~~~~~G~~~tL~C~v~g~~P~~~l~i~w~kg~~~l~~~~-----~~~~~~~~tl~~~~~r 150 (185)
T 1iam_A 82 VYWT----P--ERVELAPLPSWQPVGKQLTLRCQVEGGAPRAQLTVVLLRGEKELKREP-----AVGEPAEVTTTVLVRR 150 (185)
T ss_dssp EEBC----C--SEEEECCCCSEECTTSEEEEEEEEECCBCGGGEEEEEEETTEEEEEEE-----CCTTTEEEEEEEECCS
T ss_pred EeCC----C--CCCEEccCCccccCCCcEEEEEEcCCccCCCCcEEEEEeCCEEccccc-----CCCccccEEEEEecee
Confidence 6542 2 233344444457889999999999884 443 489999998886431 0111112456666445
Q ss_pred CCCCeeEEEEEEcccccc
Q psy2441 179 EEDQGKYECVAENEVGTE 196 (212)
Q Consensus 179 ~~d~g~y~C~a~n~~g~~ 196 (212)
.+|...|.|.|.|..+..
T Consensus 151 eD~g~~~sC~A~~~l~~~ 168 (185)
T 1iam_A 151 DHHGAQFSCRTELDLRPQ 168 (185)
T ss_dssp SCSSCEEEEEEEEECGGG
T ss_pred ccCCCeEEEEEEecCccc
Confidence 555559999999987744
No 306
>2yd1_A Tyrosine-protein phosphatase LAR; hydrolase; 1.80A {Drosophila melanogaster} PDB: 3pxj_A
Probab=99.47 E-value=1.1e-12 Score=90.63 Aligned_cols=96 Identities=31% Similarity=0.559 Sum_probs=76.9
Q ss_pred CCCccccCCcceeEecCCcEEEEEeeeeCCCCceEEEeCCEEecCCCCCceEEcC-CCCceeEEEcCCCC-CCCeeEEEE
Q psy2441 111 GFPQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREMLPVDTSRNPRYNLLT-SGAPGALQITNSIE-EDQGKYECV 188 (212)
Q Consensus 111 ~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~-~~~~~~l~i~~~~~-~d~g~y~C~ 188 (212)
.+|.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+... ..++.... .++...|.|.++.. +|+|.|.|.
T Consensus 5 ~pP~~~~~p~~~~v~~G~~v~l~C~~~g~p~~~v~W~~~~~~~~~~-~~~~~~~~~~~~~~~L~i~~v~~~~d~G~Y~C~ 83 (212)
T 2yd1_A 5 HPPEIIRKPQNQGVRVGGVASFYCAARGDPPPSIVWRKNGKKVSGT-QSRYTVLEQPGGISILRIEPVRAGRDDAPYECV 83 (212)
T ss_dssp CCCEEEECCCCEEEETTSCEEEEEEEECSSCCEEEEEETTEECCTT-STTEEEEEETTTEEEEEESSCCTTTTCSEEEEE
T ss_pred CCCEEEcCCCceEEecCCEEEEEEEEccCCCCeEEEEECCEECCCC-cceeEEEEcCCCeEEEEEEecCCCCcCceEEEE
Confidence 3488888888888999999999999999999999999999988633 34444432 22236899999999 999999999
Q ss_pred EEccccc-ceecceEEEEecc
Q psy2441 189 AENEVGT-EYSPSTMLYVKGT 208 (212)
Q Consensus 189 a~n~~g~-~~~~~~~l~v~~~ 208 (212)
+.|..|. .... +.|.|...
T Consensus 84 ~~n~~g~~~~~~-~~l~V~~~ 103 (212)
T 2yd1_A 84 AENGVGDAVSAD-ATLTIYEG 103 (212)
T ss_dssp EECSSSCEEEEE-EEEEEECT
T ss_pred EEeCCCCeEEee-EEEEEecc
Confidence 9999888 4444 77777653
No 307
>1oga_E TRBC1, T-cell receptor beta chain C region; immune system/receptor, immune system/receptor/complex, TCR, MHC, immunodominance, FLU, complex; 1.40A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 2vlm_E 2vlk_E 2vlj_E 2vlr_E 2xna_B 2xn9_B 2axh_A 2axj_A 3scm_D* 3sda_D* 3sdc_D* 3sdd_D* 3qi9_D* 3mff_B* 2ak4_E 3he7_D* 2eyr_B 3pqy_E 3kxf_E 2cde_B ...
Probab=99.47 E-value=4.8e-13 Score=95.05 Aligned_cols=162 Identities=16% Similarity=0.240 Sum_probs=96.4
Q ss_pred eEEeCCCccEEeeCCeEEEEcccCCCCCCcEEEEeCC--E--E-ec----------CCCCCeeEEe------------ec
Q psy2441 31 QITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREM--L--P-VD----------TSRNPRYNLL------------TS 83 (212)
Q Consensus 31 ~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~k~g--~--~-l~----------~~~~~~~~~~------------~~ 83 (212)
.+...|..+.+.+|+++.|.|.+. .+.+.+.|||+. . . +. .....|+.+. ..
T Consensus 5 ~v~q~p~~v~v~~G~~v~L~C~~~-~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~R~~~~~~~~~~~~L~I~~v 83 (252)
T 1oga_E 5 GITQSPKYLFRKEGQNVTLSCEQN-LNHDAMYWYRQDPGQGLRLIYYSQIVNDFQKGDIAEGYSVSREKKESFPLTVTSA 83 (252)
T ss_dssp CEECSCSEEEEETTCCEEECCEEC-SCCSEEEEEEECTTCCEEEEEEESSTTCCEECSSCTTEEECCSSTTBCCEEECSC
T ss_pred cceEcCCeEEEcCCCcEEEEEEeC-CCCCEEEEEEECCCCCeEEEEEEccCccccCCccCCcEEEEecCCCEEEEEECcC
Confidence 455677788999999999999985 356789999852 1 1 10 0012344432 21
Q ss_pred --CCCCeEEEeeeCC---------ccceeEEeecCCCCCCCccccC-CcceeEecCCcEEEEEeeeeC-CCC-ceEEEeC
Q psy2441 84 --GAPGTYIKIKPNL---------FSPLSVYSADKIPPGFPQITEA-PSTKVVEISHTTVLHCSASGN-PPP-KISWIRE 149 (212)
Q Consensus 84 --~~~g~~l~i~~~~---------~~~~~v~~~~~~~~~~p~~~~~-~~~~~~~~g~~~~l~C~~~~~-p~~-~i~W~~~ 149 (212)
+|.|.|.|..... ...+.|..... ...+|.+... +....+.+|+.+.|.|.+.+. |.+ .+.|+++
T Consensus 84 ~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~-~~~~P~v~~~~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~~~ 162 (252)
T 1oga_E 84 QKNPTAFYLCASSSRSSYEQYFGPGTRLTVTEDLK-NVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWVN 162 (252)
T ss_dssp CSCCCEEEEEEEESSTTSCCEECCCEEEEEESCGG-GCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEET
T ss_pred ChhhCEEEEEEEecCCccceeECCCEEEEEecccC-CCCCCeEEEECCChhhhccCCceEEEEEEeeEcCCCcEEEEEEC
Confidence 4788888876553 12233332100 0112444332 333334468999999999885 654 9999999
Q ss_pred CEEecCCCCCceE------Ec--CCCC---ceeEEEcCCCCC-CCeeEEEEEEcccccc
Q psy2441 150 MLPVDTSRNPRYN------LL--TSGA---PGALQITNSIEE-DQGKYECVAENEVGTE 196 (212)
Q Consensus 150 ~~~~~~~~~~~~~------~~--~~~~---~~~l~i~~~~~~-d~g~y~C~a~n~~g~~ 196 (212)
+..+... .... .. .++. .+.|.|...... +.+.|+|.+.|.....
T Consensus 163 g~~l~~~--~~~~~~~~~~~~~~~~gt~~~~s~L~i~~~~~~d~~~~ytC~v~~~~l~~ 219 (252)
T 1oga_E 163 GKEVHSG--VSTDPQPLKEQPALNDSRYSLSSRLRVSATFWQNPRNHFRCQVQFYGLSE 219 (252)
T ss_dssp TEEECSS--EEECSSCEESCTTSTTCCEEEEEEEEEEHHHHTCTTCEEEEEEEECCBCT
T ss_pred CEECCCC--cccccccccccccCCCCCEEEEEEEEECHHHhccCCCEEEEEEEcCCCCC
Confidence 9887653 1110 00 1111 234777665553 5789999999976543
No 308
>2iep_A Muscle-specific kinase receptor; beta-sandwich, signaling protein,transferase; 2.21A {Rattus norvegicus}
Probab=99.47 E-value=3.6e-13 Score=91.47 Aligned_cols=94 Identities=29% Similarity=0.476 Sum_probs=75.0
Q ss_pred CCccccCCcceeEecCCcEEEEEeeeeCCCCceEEEeCCEEecCCCCCceEEcCCCCceeEEEcCCCCCCCeeEEEEEEc
Q psy2441 112 FPQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREMLPVDTSRNPRYNLLTSGAPGALQITNSIEEDQGKYECVAEN 191 (212)
Q Consensus 112 ~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~n 191 (212)
+|.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+... ..++....++ ..|.|.+++.+|+|.|.|.+.|
T Consensus 7 ~P~i~~~~~~~~~~~G~~v~l~C~~~~~p~~~i~W~~~~~~~~~~-~~~~~~~~~~--~~L~i~~~~~~d~G~Y~C~~~~ 83 (192)
T 2iep_A 7 APVITTPLETVDALVEEVATFMCAVESYPQPEISWTRNKILIKLF-DTRYSIRENG--QLLTILSVEDSDDGIYCCTANN 83 (192)
T ss_dssp EEEESSCCCEEEEETTSCEEEECCEEEESCCEEEEEETTEECCTT-CTTEEEEGGG--TEEEESSCCGGGCEEEEEEEEC
T ss_pred CceeecCccceeeeCCCcEEEEeeCCCCCCCeEEEEECCEEcccc-CccEEEcCCc--cEEEEcCCCcccCeEEEEEEEc
Confidence 366777777788999999999999999999999999999888654 3555555443 5799999999999999999999
Q ss_pred ccccceecceEEEEecc
Q psy2441 192 EVGTEYSPSTMLYVKGT 208 (212)
Q Consensus 192 ~~g~~~~~~~~l~v~~~ 208 (212)
..|........+.|...
T Consensus 84 ~~~~~~~~~~~l~v~~~ 100 (192)
T 2iep_A 84 GVGGAVESCGALQVKMK 100 (192)
T ss_dssp SSSCCEEEEEEEEEEEE
T ss_pred CCCceeEeEEEEEEEeC
Confidence 88875443366666554
No 309
>2eo1_A OBSCN protein, cDNA FLJ14124 FIS, clone mamma1002498; beta-sandwich, IG-fold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.46 E-value=6.3e-13 Score=81.14 Aligned_cols=81 Identities=17% Similarity=0.374 Sum_probs=64.1
Q ss_pred cceeEecCCcEEEEEeeeeCCCCceEEEeCCEEecCCCCCceEEcCCCCceeEEEcCCCCCCCeeEEEEEEcccccceec
Q psy2441 120 STKVVEISHTTVLHCSASGNPPPKISWIREMLPVDTSRNPRYNLLTSGAPGALQITNSIEEDQGKYECVAENEVGTEYSP 199 (212)
Q Consensus 120 ~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~n~~g~~~~~ 199 (212)
....+.+|+.+.|.|.+. .|.+.+.|++++..+... .++.+..++....|.|.++..+|+|.|.|.|.|. ...
T Consensus 19 ~~~~v~~G~~v~L~C~~~-~p~~~v~W~k~g~~~~~~--~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~~~----~~~ 91 (102)
T 2eo1_A 19 REVQAEAGASATLSCEVA-QAQTEVTWYKDGKKLSSS--SKVRVEAVGCTRRLVVQQAGQAEAGEYSCEAGGQ----QLS 91 (102)
T ss_dssp EEEEEETTCCEEECCBCS-CSSSCCEEEETTEECCCC--SSEEEEEETTEEEEEETTCCTTTCSCEEEEETTE----ECC
T ss_pred ccEEEeCCCcEEEEEEec-CCCCceEEEECCEECCCC--CCEEEEEcCCEEEEEECCCCcccCEEEEEEcCCC----cEE
Confidence 345788999999999998 888999999999988764 4555554444478999999999999999999543 334
Q ss_pred ceEEEEecc
Q psy2441 200 STMLYVKGT 208 (212)
Q Consensus 200 ~~~l~v~~~ 208 (212)
+.|.|.++
T Consensus 92 -~~l~V~~p 99 (102)
T 2eo1_A 92 -FRLQVAGQ 99 (102)
T ss_dssp -EEEEEESC
T ss_pred -EEEEEeCC
Confidence 77777664
No 310
>1ow0_A IG alpha-1 chain C region; IGA1, fcari, CD89, antibody, immunoglobulin-LIK immune system; HET: NAG FUL BMA GAL SIA FUC MAN NDG; 3.10A {Homo sapiens} SCOP: b.1.1.2 b.1.1.2 PDB: 2qej_A*
Probab=99.46 E-value=6.2e-14 Score=97.25 Aligned_cols=165 Identities=13% Similarity=0.218 Sum_probs=94.5
Q ss_pred CCeE-EeCCCccEEeeCCeEEEEcccCCCCC---CcEEEEeCCEEecCC--------CCCeeE------Eeec--CCCCe
Q psy2441 29 FPQI-TEAPSTKVVEISHTTVLHCSASGNPP---PKISWIREMLPVDTS--------RNPRYN------LLTS--GAPGT 88 (212)
Q Consensus 29 ~p~~-~~~~~~~~v~~g~~v~l~C~~~~~p~---~~v~W~k~g~~l~~~--------~~~~~~------~~~~--~~~g~ 88 (212)
+|.+ ...|....+.+|+.++|.|.+.+.++ +.|.| + +.++... ...++. +... +|.|.
T Consensus 3 ~p~v~~~~P~~~~v~~G~~v~L~C~~~g~~p~~~~~v~W-~-~~~~~~~~~~~~~~~~~g~~~~~~~L~I~~~~~~D~g~ 80 (214)
T 1ow0_A 3 HPRLSLHRPALEDLLLGSEANLTCTLTGLRDASGVTFTW-T-PSSGKSAVQGPPERDLCGCYSVSSVLPGCAEPWNHGKT 80 (214)
T ss_dssp CCCCEEECCCHHHHHHCSSCCCEEEETTCCSCCCCCCCB-S-SCSSCCCEECCCCCCSTTCCCEEEECTTTHHHHHHTCE
T ss_pred CCEEEEECcChHHhccCCCcEEEEEEeeeECCCCeEEEE-c-CCCCCCcccCCceECCCCcEEEEEEEEEeHHHcCCCCe
Confidence 3444 35677788899999999999988754 68999 4 3333211 011111 1110 36889
Q ss_pred EEEeeeCCcc--ceeEEeecCCCCCCCccccCC-cceeEecCCcEEEEEeeeeC-CC-CceEEEeCCEEecCCC--CCce
Q psy2441 89 YIKIKPNLFS--PLSVYSADKIPPGFPQITEAP-STKVVEISHTTVLHCSASGN-PP-PKISWIREMLPVDTSR--NPRY 161 (212)
Q Consensus 89 ~l~i~~~~~~--~~~v~~~~~~~~~~p~~~~~~-~~~~~~~g~~~~l~C~~~~~-p~-~~i~W~~~~~~~~~~~--~~~~ 161 (212)
|.|....... .............+|.+...+ ....+..|+.+.|.|.+.+. |. +.|.|++++..+.... ....
T Consensus 81 Y~C~~~~~~~~~~~~~~i~~~~~~~~P~v~~~~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~ 160 (214)
T 1ow0_A 81 FTCTAAYPESKTPLTATLSKSGNTFRPEVHLLPPPSEELALNELVTLTCLARGFSPKDVLVRWLQGSQELPREKYLTWAS 160 (214)
T ss_dssp EEEEECCSSCSSCEEEEEECCSSCCCCEEEEECCCTTTTTSSSEEEEEEEEEEESSSCCEEEEEETTEECCGGGSEECCC
T ss_pred EEEEEecCCCCCceeEeeccCCCCCCCEEEecCCCHHHhccCCceEEEEEEeeeECCCcEEEEEECCEECCCCceeecCC
Confidence 9998876322 111111100112235554332 22335578899999999984 54 4999999998876431 0111
Q ss_pred EEc---CCCC---ceeEEEcCCCCCCCeeEEEEEEccccc
Q psy2441 162 NLL---TSGA---PGALQITNSIEEDQGKYECVAENEVGT 195 (212)
Q Consensus 162 ~~~---~~~~---~~~l~i~~~~~~d~g~y~C~a~n~~g~ 195 (212)
... .++. .+.|.+......+.|.|+|.|.|..-.
T Consensus 161 ~~~~~~~dgt~~~~s~l~v~~~~~~~~~~ytC~v~n~~l~ 200 (214)
T 1ow0_A 161 RQEPSQGTTTFAVTSILRVAAEDWKKGDTFSCMVGHEALP 200 (214)
T ss_dssp EECSCSSSCCEEEEEEEEEEHHHHHHTCCEEEEEECTTCT
T ss_pred cccccCCCCcEEEEEEEEECHHHccCCCEEEEEEECCCCC
Confidence 222 2211 123444444445689999999997543
No 311
>3u2s_H PG9 heavy chain; greek KEY, immunoglobulin, immune recognition, immune system; HET: PCA TYS BU3 NAG BMA MAN; 1.80A {Homo sapiens} PDB: 3u4e_H* 3u36_H 3mug_B* 3lrs_H* 3mme_H* 2qsc_H*
Probab=99.46 E-value=9.4e-13 Score=93.36 Aligned_cols=166 Identities=19% Similarity=0.256 Sum_probs=92.4
Q ss_pred eCCCccEEeeCCeEEEEcccCCC--CCCcEEEEeCC--E---Ee---c---------CCCCCeeEEeec-----------
Q psy2441 34 EAPSTKVVEISHTTVLHCSASGN--PPPKISWIREM--L---PV---D---------TSRNPRYNLLTS----------- 83 (212)
Q Consensus 34 ~~~~~~~v~~g~~v~l~C~~~~~--p~~~v~W~k~g--~---~l---~---------~~~~~~~~~~~~----------- 83 (212)
..+..+.+.+|+.++|.|.+.+. +...+.|||.. . .+ . .....|+.+...
T Consensus 4 ~~~~~v~v~~G~~v~L~C~~s~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~ 83 (248)
T 3u2s_H 4 VESGGGVVQPGSSLRLSCAASGFDFSRQGMHWVRQAPGQGLEWVAFIKYDGSEKYHADSVWGRLSISRDNSKDTLYLQMN 83 (248)
T ss_dssp EEECCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEEEGGGTEEEEEEC
T ss_pred ecCCCEEEeCCCCEEEEEEeccccCCccEEEEEEECCCCCcEEEEEEecCCCceecCcccCCcEEEEecCCCCEEEEEEC
Confidence 34567789999999999999652 34579999841 1 11 0 011245544321
Q ss_pred ----CCCCeEEEeeeCC----------------------------ccceeEEeecCCCCCCCccccCCcceeEecCCcEE
Q psy2441 84 ----GAPGTYIKIKPNL----------------------------FSPLSVYSADKIPPGFPQITEAPSTKVVEISHTTV 131 (212)
Q Consensus 84 ----~~~g~~l~i~~~~----------------------------~~~~~v~~~~~~~~~~p~~~~~~~~~~~~~g~~~~ 131 (212)
+|.|.|.|..... ...+.|.. ..+..|.+...+....+..|+.+.
T Consensus 84 ~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~V~~---~~~~~P~v~~~~~~~~~~~g~~~~ 160 (248)
T 3u2s_H 84 SLRVEDTATYFCVREAGGPDYRNGYNYYDFYDGYYNYHYMDVWGKGTTVTVSS---ASTKGPSVFPLAPSSKSTSGGTAA 160 (248)
T ss_dssp SCCGGGCEEEEEEEEEEECEEETTEEEECGGGCCEEEEEEEEECCCEEEEECS---CCCBCCEEEEECCC------CEEE
T ss_pred CCCHHHCEEEEEEEeCCCCccccccccccccccccccccceeeCCCEEEEEcc---cCCCCCEEEEeCCCccccCCCcEE
Confidence 3777777765431 11222211 122234444332333345699999
Q ss_pred EEEeeee-CC-CCceEEEeCCEEecCCCCCceEEcCCCC---ceeEEEcCCCCCCCeeEEEEEEcccccceecceEEEE
Q psy2441 132 LHCSASG-NP-PPKISWIREMLPVDTSRNPRYNLLTSGA---PGALQITNSIEEDQGKYECVAENEVGTEYSPSTMLYV 205 (212)
Q Consensus 132 l~C~~~~-~p-~~~i~W~~~~~~~~~~~~~~~~~~~~~~---~~~l~i~~~~~~d~g~y~C~a~n~~g~~~~~~~~l~v 205 (212)
|.|.+.+ .| .+.+.|++++..+........ ...++. .+.|.|......| |.|+|.+.|..+..... ..+.+
T Consensus 161 L~C~~~~~~P~~~~v~W~~~g~~~~~~~~~~~-~~~~g~~~~~s~L~i~~~~~~~-~~ytC~v~h~~~~~~~~-~~l~~ 236 (248)
T 3u2s_H 161 LGCLVKDYFPEPVTVSWNSGALTSGVHTFPAV-LQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVD-KKVEP 236 (248)
T ss_dssp EEEEEEEEBSSCCEEEEGGGTBCTTEEECCCE-ECTTSCEEEEEEEEEEGGGBTT-BCCEEEEEEGGGTEEEE-EECCC
T ss_pred EEEEEeeEECCCeEEEEeECCccCceeecCce-ECCCCCEEEEEEEEEChhhcCC-CeEEEEEEECCCCcceE-EEEcc
Confidence 9999987 44 357899998854321100000 111111 2568888888888 99999999987766544 44443
No 312
>2yd6_A PTPRD protein; hydrolase; HET: FLC; 1.35A {Homo sapiens} PDB: 2yd7_A 2yd2_A 2yd3_A 2yd4_A* 2yd8_A* 2yd5_A* 3pxh_A
Probab=99.46 E-value=6.1e-13 Score=91.98 Aligned_cols=93 Identities=29% Similarity=0.442 Sum_probs=73.8
Q ss_pred CccccCCcceeEecCCcEEEEEeeeeCCCCceEEEeCCEEecCCCCCceEEcCCCCceeEEEcCC-CCCCCeeEEEEEEc
Q psy2441 113 PQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREMLPVDTSRNPRYNLLTSGAPGALQITNS-IEEDQGKYECVAEN 191 (212)
Q Consensus 113 p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~-~~~d~g~y~C~a~n 191 (212)
|.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+... ........++....|.|.++ +.+|+|.|.|.|.|
T Consensus 7 P~~~~~p~~~~v~~G~~v~L~C~~~g~p~~~v~W~k~~~~~~~~-~~~~~~~~~~~~~~L~i~~v~~~~d~G~Y~C~a~n 85 (212)
T 2yd6_A 7 PRFTRTPVDQTGVSGGVASFICQATGDPRPKIVWNKKGKKVSNQ-RFEVIEFDDGSGSVLRIQPLRTPRDEAIYECVASN 85 (212)
T ss_dssp EEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCT-TEEEEEEGGGTEEEEEECSCCTTTTCEEEEEEEEE
T ss_pred CeEEeCcceeEEecCCeEEEEEEEeeCCCCEEEEEECCcCCCCC-ceeEEEEcCCCceEEEEeccCCCCCCeEEEEEEEc
Confidence 77777788888999999999999999999999999999888753 11222222222368999999 59999999999999
Q ss_pred ccccceecceEEEEec
Q psy2441 192 EVGTEYSPSTMLYVKG 207 (212)
Q Consensus 192 ~~g~~~~~~~~l~v~~ 207 (212)
..|..... +.|.|..
T Consensus 86 ~~g~~~~~-~~l~V~~ 100 (212)
T 2yd6_A 86 NVGEISVS-TRLTVLR 100 (212)
T ss_dssp TTEEEEEE-EEEEEEC
T ss_pred CCCcEEEE-EEEEEec
Confidence 99887666 7777764
No 313
>1rhf_A Tyrosine-protein kinase receptor TYRO3; AXL/TYRO3 family, cellular adhesion, ligand-independent DIME mutational analysis, transferase; HET: EPE; 1.96A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4
Probab=99.46 E-value=5.3e-13 Score=89.92 Aligned_cols=96 Identities=25% Similarity=0.375 Sum_probs=70.8
Q ss_pred CccccCCcceeEecCCcEEEEEeeeeCCCCceEEEeCCEEecCCCCCceEEcCCCCceeEEEcCCCCCCCeeEEEEEEcc
Q psy2441 113 PQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREMLPVDTSRNPRYNLLTSGAPGALQITNSIEEDQGKYECVAENE 192 (212)
Q Consensus 113 p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~n~ 192 (212)
|.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+.......+....+.....|.|.+++.+|+|.|.|.+.|.
T Consensus 3 ~~~~~~p~~~~v~~G~~v~l~C~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~ 82 (182)
T 1rhf_A 3 LKLMGAPVKLTVSQGQPVKLNCSVEGMEEPDIQWVKDGAVVQNLDQLYIPVSEQHWIGFLSLKSVERSDAGRYWCQVEDG 82 (182)
T ss_dssp ----CCCEEEEEETTCCEEEEEEEESCSSCCEEEEETTEECCSSEEEEEEEETTEEEEEEEESSCCGGGCEEEEEEESSC
T ss_pred CEEEeCCcceEEeCCCcEEEEEEEeCCCCCeEEEEECCeecCCCCceEEEecCCCceEEEEEeecCcccCeEEEEEEEcC
Confidence 56666777788999999999999999999999999999888764111122222111368999999999999999999998
Q ss_pred cccceecceEEEEecc
Q psy2441 193 VGTEYSPSTMLYVKGT 208 (212)
Q Consensus 193 ~g~~~~~~~~l~v~~~ 208 (212)
.|......+.|.|..+
T Consensus 83 ~~~~~~~~~~l~V~~~ 98 (182)
T 1rhf_A 83 GETEISQPVWLTVEGV 98 (182)
T ss_dssp TTCEECCCEEEEEECS
T ss_pred CCcEEEEEEEEEEecC
Confidence 7765544477777654
No 314
>3rbg_A Cytotoxic and regulatory T-cell molecule; IGV, crtam, structural genomics, PSI-biology, NEW YORK struc genomics research consortium, nysgrc; 2.30A {Homo sapiens}
Probab=99.45 E-value=5.8e-13 Score=84.30 Aligned_cols=92 Identities=23% Similarity=0.333 Sum_probs=67.8
Q ss_pred ccCCcceeEecCCcEEEEEeeeeCCCCceEEEeCCEEecC------CCCCceEEcC-CCCceeEEEcCCCCCCCeeEEEE
Q psy2441 116 TEAPSTKVVEISHTTVLHCSASGNPPPKISWIREMLPVDT------SRNPRYNLLT-SGAPGALQITNSIEEDQGKYECV 188 (212)
Q Consensus 116 ~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~------~~~~~~~~~~-~~~~~~l~i~~~~~~d~g~y~C~ 188 (212)
...+....+.+|+++.|.|.+.+.|.+.+.|++.+..+.. ....++.... .....+|.|.+++.+|+|.|.|.
T Consensus 5 ~~~~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~ 84 (124)
T 3rbg_A 5 TNHTETITVEEGQTLTLKCVTSLRKNSSLQWLTPSGFTIFLNEYPVLKNSKYQLLHHSANQLSITVPNVTLQDEGVYKCL 84 (124)
T ss_dssp CCSEEEEEEETTSCEEEEEECCCCTTCEEEEECTTSCEEEETTEECSCSSCCEEEEEETTEEEEEESSCCGGGCEEEEEE
T ss_pred cCCCccEEEcCCCCEEEEeEEeccCCCEEEEECCCCeEEEEeccccccCCcEEEEeCCCCEEEEEECCCChHHCEEEEEE
Confidence 3445567889999999999999999999999976543211 0123443322 22237999999999999999999
Q ss_pred EEcccccceecceEEEEecce
Q psy2441 189 AENEVGTEYSPSTMLYVKGTQ 209 (212)
Q Consensus 189 a~n~~g~~~~~~~~l~v~~~~ 209 (212)
+.|. |..... +.|.|.+.+
T Consensus 85 a~n~-g~~~~~-~~l~V~~~P 103 (124)
T 3rbg_A 85 HYSD-SVSTKE-VKVIVLATM 103 (124)
T ss_dssp EESS-SEEEEE-EEEEEECC-
T ss_pred EEcC-CCCcEE-EEEEEEeCC
Confidence 9999 777666 788877654
No 315
>3qr2_A Basigin; CD147, EMMPRIN, immunoglobulin-like domain, beta sheet, STRU genomics, berkeley structural genomics center, BSGC, cell A; 2.30A {Homo sapiens} PDB: 3qqn_A
Probab=99.45 E-value=9.9e-14 Score=89.44 Aligned_cols=87 Identities=28% Similarity=0.449 Sum_probs=66.4
Q ss_pred CCCccccCCcceeEecCCcEEEEEeeeeCCCCceEEEeCCEEecCCC--------CCceEEc---CCCCceeEEEcCCCC
Q psy2441 111 GFPQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREMLPVDTSR--------NPRYNLL---TSGAPGALQITNSIE 179 (212)
Q Consensus 111 ~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~--------~~~~~~~---~~~~~~~l~i~~~~~ 179 (212)
.+|.+...+....+.+|+.+.|.|.+.+.|.|.+.|++++..+.... ..++... .......|.|.++..
T Consensus 20 ~pP~~~~~p~~~~v~~G~~v~L~C~~~g~P~p~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~ 99 (137)
T 3qr2_A 20 HMAGFVQAPLSQQRWVGGSVELHCEAVGSPVPEIQWWFEGQGPNDICSQLWDGARLDRVHIHATYHQHAASTISIDTLVE 99 (137)
T ss_dssp -CCEEEECCCCEEEETTSCEEEEEEEECSSCCEEEEEEEESSTTCCCEECCTTHHHHTEEEEEEESSSEEEEEEECSCCG
T ss_pred CCCeEEcCCCCEEEeCCCCEEEEEEEeeecCCeEEEEECCCCccccceeecccCcccceEEecccccccceEEEECCCCc
Confidence 34888888888899999999999999999999999999776543210 0122211 111136899999999
Q ss_pred CCCeeEEEEEEcccccce
Q psy2441 180 EDQGKYECVAENEVGTEY 197 (212)
Q Consensus 180 ~d~g~y~C~a~n~~g~~~ 197 (212)
+|+|.|.|.|.|..|...
T Consensus 100 ~D~G~Y~C~a~N~~G~~~ 117 (137)
T 3qr2_A 100 EDTGTYECRASNDPDRNH 117 (137)
T ss_dssp GGCEEEEEEEECCTTSSS
T ss_pred ccCEEEEEEEEecCCccc
Confidence 999999999999998864
No 316
>2v5t_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, membrane, glycoprote adhesion, transmembrane; HET: NAG; 2.00A {Homo sapiens}
Probab=99.45 E-value=9.1e-13 Score=89.19 Aligned_cols=93 Identities=25% Similarity=0.415 Sum_probs=68.8
Q ss_pred CccccCCcceeEecCCcEEEEEeeeeCCCCceEEEeCCEEecCCCCCceEEcCCCCceeEEEcCCCCCCCeeEEEEEEcc
Q psy2441 113 PQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREMLPVDTSRNPRYNLLTSGAPGALQITNSIEEDQGKYECVAENE 192 (212)
Q Consensus 113 p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~n~ 192 (212)
|.|...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+......++....+ ..|.|.+++.+|.|.|.|.+.|.
T Consensus 3 ~~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~---~~L~i~~~~~~d~G~Y~C~~~~~ 79 (189)
T 2v5t_A 3 LTFREVVSPQEFKQGEDAEVVCRVSSSPAPAVSWLYHNEEVTTISDNRFAMLAN---NNLQILNINKSDEGIYRCEGRVE 79 (189)
T ss_dssp CEEEECCSSEEEETTSCEEECCEEECSSCCEEEEEC-----CBCCCTTEEECTT---SCEEETTCCGGGCEEEEEEEEET
T ss_pred ceeeccCCCEEEeCCCcEEEEEEEcCCCCCEEEEEECCccceeccCCeEEEecC---CCEEEeeCCHhHCcEEEEEEEEc
Confidence 666677777889999999999999999999999999998876544566666665 68999999999999999999988
Q ss_pred ccccee-cceEEEEecc
Q psy2441 193 VGTEYS-PSTMLYVKGT 208 (212)
Q Consensus 193 ~g~~~~-~~~~l~v~~~ 208 (212)
.+.... ..+.+.+...
T Consensus 80 ~~~~~~~~~~~l~v~~~ 96 (189)
T 2v5t_A 80 ARGEIDFRDIIVIVNVP 96 (189)
T ss_dssp TTTEEEEEEEEEEEEEE
T ss_pred CCCceEEEEEEEEecCC
Confidence 644332 2244555443
No 317
>3shs_A HOC head outer capsid protein; immunoglobulin-like domain, phage capsid decorative protein, interaction with bacteria; 1.95A {Enterobacteria phage RB49}
Probab=99.44 E-value=1.2e-11 Score=86.50 Aligned_cols=158 Identities=15% Similarity=0.224 Sum_probs=103.9
Q ss_pred CeEEeCCCccEEeeCCeEEEEcccC-CCC---CCcEEEEeCCEEecCCCCCeeEEeec--CCCCeEEEeeeCCcc-----
Q psy2441 30 PQITEAPSTKVVEISHTTVLHCSAS-GNP---PPKISWIREMLPVDTSRNPRYNLLTS--GAPGTYIKIKPNLFS----- 98 (212)
Q Consensus 30 p~~~~~~~~~~v~~g~~v~l~C~~~-~~p---~~~v~W~k~g~~l~~~~~~~~~~~~~--~~~g~~l~i~~~~~~----- 98 (212)
+.+.+.|....+..|+.++|.|.+. +.| +..++|+|||.++... ...+.+... .+.|.|.|.......
T Consensus 3 ~tVs~~P~~~~i~~GdsVTLTatVaGGkP~pspyTYqWyKDG~~IsGa-T~tLti~s~t~sdSG~YqCvVTDa~Gcs~tS 81 (304)
T 3shs_A 3 FTVSIQSNKRCFLAGDGFTLTATVAGDEPLPSNLTYTWTKDDQPHENN-TATLTVADATSENAGSYKVTVQDTDTMTSVE 81 (304)
T ss_dssp EEEEEEESCSSBCTTCCEEEEEEEEESSSCCCCEEEEEEETTEECSCC-SSEEEESSCCGGGCEEEEEEEEETTTCCEEE
T ss_pred cEEEeCCCCccccCCCCEEEEEEecCCCCCCCCceEEEEECCccccCC-cceEEeeeccccCCeEEEEEEEECCCCeeee
Confidence 3456778888899999999999984 456 4579999999998754 234444332 378899887654221
Q ss_pred -ceeEEeecCCCCCCCcc-ccCCcceeEecCCcEEEEEee--e-eCC-----CCceEEEeCCEEecCCCCCceEEcCCCC
Q psy2441 99 -PLSVYSADKIPPGFPQI-TEAPSTKVVEISHTTVLHCSA--S-GNP-----PPKISWIREMLPVDTSRNPRYNLLTSGA 168 (212)
Q Consensus 99 -~~~v~~~~~~~~~~p~~-~~~~~~~~~~~g~~~~l~C~~--~-~~p-----~~~i~W~~~~~~~~~~~~~~~~~~~~~~ 168 (212)
.+.|... ..+.+ ...|....+..|..+.|.+.+ . |.+ ..++.|++++..+...
T Consensus 82 s~VtVT~~-----a~l~i~it~P~s~~vssg~sVtL~aTVt~SGGtppA~~~~yTYQWyKngt~IsgA------------ 144 (304)
T 3shs_A 82 SEVFLMEE-----AELIVNITEPQHFYVSSQTDVELHATVKFSGGKTPADNYELHYSWSKGEDVIDTT------------ 144 (304)
T ss_dssp CCCEEECB-----CCEEEEESSCSEEEECSSCCEEEEEEEEETTSCCSSTTCCCEEEEEETTEEEESS------------
T ss_pred eeEEEecc-----CceeEEecCCCceeccCCCeEEEEEEEeccCCCCcccCCCceeEEeeCCeEccCc------------
Confidence 1222211 00111 122344445567788888877 3 334 4599999999877653
Q ss_pred ceeEEEcCCCCCCCeeEEEEEEcccc-cceecceEEEEe
Q psy2441 169 PGALQITNSIEEDQGKYECVAENEVG-TEYSPSTMLYVK 206 (212)
Q Consensus 169 ~~~l~i~~~~~~d~g~y~C~a~n~~g-~~~~~~~~l~v~ 206 (212)
..|.+...+..+.|.|.|.+.|..+ ...+.++.+.+-
T Consensus 145 -q~lT~sS~TateaG~YtV~VTn~~~~c~~s~~~~i~~~ 182 (304)
T 3shs_A 145 -QDITIQEFTADKNGVYTVKVWGESEDSAASASTKIMLA 182 (304)
T ss_dssp -SEEEECSCCGGGCEEEEEEEESSSGGGCEEEEEEEEEC
T ss_pred -cccceeeEEecCCeEEEEEEEcCCCCcccccceEEEEE
Confidence 5677778888999999999999865 444443444443
No 318
>1ypz_F T-cell receptor gamma chain, beta-2-microglobulin; H2-T22 protein, T cell receptor delta, immune system; HET: NAG MAN FUC; 3.40A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.43 E-value=4.7e-12 Score=88.73 Aligned_cols=161 Identities=16% Similarity=0.179 Sum_probs=94.6
Q ss_pred EEeCCCccEEeeCCeEEEEcccCCC--CCCcEEEEeCC--E---Eec----C------C-CCCeeEEeec----------
Q psy2441 32 ITEAPSTKVVEISHTTVLHCSASGN--PPPKISWIREM--L---PVD----T------S-RNPRYNLLTS---------- 83 (212)
Q Consensus 32 ~~~~~~~~~v~~g~~v~l~C~~~~~--p~~~v~W~k~g--~---~l~----~------~-~~~~~~~~~~---------- 83 (212)
+...|..+.+.+|++++|.|.+.+. +...+.|||.. . .+. . . ...|+.+...
T Consensus 4 v~q~p~~v~~~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I 83 (230)
T 1ypz_F 4 LEQPEISISRPRDETAQISCKVFIESFRSVTIHWYRQKPNQGLEFLLYVLATPTHIFLDKEYKKMEASKNPSASTSILTI 83 (230)
T ss_dssp EECSCSEEEEETTSCEEEEEEECCGGGGGCCEEEEEECTTTCCEEEEEECSSCCCEEEESSSSEEEEEECCTTTEEEEEE
T ss_pred ccccCCEEEEeCCCcEEEEEEeeccccCccEEEEEEECCCCCCEEEEEEecCCeeecCcccCCeEEEEEcCCCCEEEEEE
Confidence 4556778899999999999999764 55689999842 1 110 0 0 1255554421
Q ss_pred -----CCCCeEEEeeeCC----------ccceeEEeecC-----CCCCCCccccCCcceeEecCCcEEEEEeeeeC-CC-
Q psy2441 84 -----GAPGTYIKIKPNL----------FSPLSVYSADK-----IPPGFPQITEAPSTKVVEISHTTVLHCSASGN-PP- 141 (212)
Q Consensus 84 -----~~~g~~l~i~~~~----------~~~~~v~~~~~-----~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~-p~- 141 (212)
+|.|.|.|..... ...+.|..... .++ .|.+. .+....+..|+.+.|.|.+.+. |.
T Consensus 84 ~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~L~V~~~~~~l~~~~~p-~~~v~-~p~~~~v~~g~~~~L~C~~~g~~P~~ 161 (230)
T 1ypz_F 84 YSLEEEDEAIYYCSYGEGSSGFHKVFAEGTKLIVIPSDKRLDADISP-KPTIF-LPSVAETNLHKTGTYLCLLEAFFPDV 161 (230)
T ss_dssp CSCCGGGCSEEEEEECCTTTCCCCEECSCEEEEEECCCTTCCSCCSC-CCCEE-CCCHHHHHHHSCEEEEEEEEEESSCC
T ss_pred CcCChhhCEEEEEEEECCCCCcccccCCCEEEEEecccccCcccCCC-CceEE-CCCchhhccCCcceEEEEEeeecCCC
Confidence 3777777766542 12333331110 011 11222 1333334568999999999875 65
Q ss_pred CceEEEe-CCEEecCCCCCceEEcCCCC---ceeEEEcCCCCCCCeeEEEEEEcccccce
Q psy2441 142 PKISWIR-EMLPVDTSRNPRYNLLTSGA---PGALQITNSIEEDQGKYECVAENEVGTEY 197 (212)
Q Consensus 142 ~~i~W~~-~~~~~~~~~~~~~~~~~~~~---~~~l~i~~~~~~d~g~y~C~a~n~~g~~~ 197 (212)
+.+.|++ ++..+......... ..++. .+.|.|.+... + |.|+|.+.|..+...
T Consensus 162 ~~v~W~~~~g~~l~~~~~~~~~-~~~~~~~~~s~L~i~~~~~-~-~~ytC~v~~~~~~~~ 218 (230)
T 1ypz_F 162 IRVYWKEKDGNTILDSQEGDTL-KTNDTYMKFSWLTVPERAM-G-KEHRCIVKHENNKGG 218 (230)
T ss_dssp CEEEEECTTSSCBCCCEECCCE-EETTEEEEEEEEEECGGGT-T-SCEEEEEECSSCTTT
T ss_pred eEEEEEccCCeEccccccceee-cCCCCEEEEEEEEEEhhhC-C-CEEEEEEEECCCCCc
Confidence 5999999 77655432111111 11111 25688877765 4 999999999876543
No 319
>2va4_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; transmembrane, phosphorylation, immunoglobulin domain, membrane, glycoprotein; HET: NAG; 1.9A {Homo sapiens} PDB: 2xy1_A*
Probab=99.42 E-value=1.8e-12 Score=87.88 Aligned_cols=91 Identities=31% Similarity=0.519 Sum_probs=72.4
Q ss_pred CccccCCc--ceeEecCCcEEEEEeeeeCCCCceEEEeCCEEecCCCCCceEEcCCCCceeEEEcCCCCCCCeeEEEEEE
Q psy2441 113 PQITEAPS--TKVVEISHTTVLHCSASGNPPPKISWIREMLPVDTSRNPRYNLLTSGAPGALQITNSIEEDQGKYECVAE 190 (212)
Q Consensus 113 p~~~~~~~--~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~ 190 (212)
|.+...+. ...+.+|+.+.|.|.+.+.|.+.+.|++++..+... .++....+. ..|.|.+++.+|.|.|.|.+.
T Consensus 3 P~i~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~--~~~~~~~~~--~~L~i~~~~~~d~G~Y~C~~~ 78 (192)
T 2va4_A 3 PAISMPQKSFNATAERGEEMTFSCRASGSPEPAISWFRNGKLIEEN--EKYILKGSN--TELTVRNIINSDGGPYVCRAT 78 (192)
T ss_dssp CEEECSCCEEEEETTSCCCEEEECEEECSSCCEEEEEETTEECCCS--SSEEEETTT--TEEEECSCCGGGCEEEEEEEE
T ss_pred CcccCCCCCcEEEEecCCCEEEEEeeccCCCCeEEEEECCeEcCCC--ccEEEeCCe--eEEEEecCChhcCcEEEEEEE
Confidence 55555433 466788999999999999999999999999988764 455554443 689999999999999999999
Q ss_pred cccccceecceEEEEecc
Q psy2441 191 NEVGTEYSPSTMLYVKGT 208 (212)
Q Consensus 191 n~~g~~~~~~~~l~v~~~ 208 (212)
|..|..... +.|.|...
T Consensus 79 ~~~~~~~~~-~~l~V~~~ 95 (192)
T 2va4_A 79 NKAGEDEKQ-AFLQVFVQ 95 (192)
T ss_dssp ETTEEEEEE-EEEEEEEE
T ss_pred ccccccceE-EEEEEEcc
Confidence 998877655 66666543
No 320
>3n9g_H FAB fragment of MAB CR4354, heavy chain; human neutralizing antibody, immun anti-WEST NIle virus; 1.43A {Homo sapiens} PDB: 3iyw_H 3qeh_A 3sqo_H 4hk0_A 4hk3_J 4hkx_A* 3u0t_D 3c08_H 3lmj_H 3lqa_H* 3c09_H* 4dn3_H 3pp4_H 3pp3_H 4hkb_J 2jb5_H* 2jb6_B* 2eh7_H 2eh8_H 3jwd_H* ...
Probab=99.42 E-value=1.5e-12 Score=91.30 Aligned_cols=165 Identities=16% Similarity=0.220 Sum_probs=93.3
Q ss_pred CCccEEeeCCeEEEEcccCCC--CCCcEEEEeCC-----EEe---cC---------CCCCeeEEeec-------------
Q psy2441 36 PSTKVVEISHTTVLHCSASGN--PPPKISWIREM-----LPV---DT---------SRNPRYNLLTS------------- 83 (212)
Q Consensus 36 ~~~~~v~~g~~v~l~C~~~~~--p~~~v~W~k~g-----~~l---~~---------~~~~~~~~~~~------------- 83 (212)
+..+.+.+|+.++|.|.+.+. ....+.|||.. ..+ .. ....|+.+...
T Consensus 7 ~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~rq~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v 86 (230)
T 3n9g_H 7 SGAEVRKPGASTKVSCKASGYTFTHYYMHWVRQAPGQGLEWMGIINPSGGSTTYAQKLQGRVTMTRDTSTSTVYMELSSL 86 (230)
T ss_dssp CCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTTCCEEECGGGTTTEEEEEETTTTEEEEEECSC
T ss_pred cCCEEEcCCCCEEEEEEeecceecCcEEEEEEECCCCCcEEEEEEecCCCceecCcccCCcEEEEecCCCCEEEEEECCC
Confidence 336789999999999998652 34579999831 111 00 01234444322
Q ss_pred --CCCCeEEEeeeCCc--------------cceeEEeecCCCCCCCccccCCcceeEecCCcEEEEEeeeeC-C-CCceE
Q psy2441 84 --GAPGTYIKIKPNLF--------------SPLSVYSADKIPPGFPQITEAPSTKVVEISHTTVLHCSASGN-P-PPKIS 145 (212)
Q Consensus 84 --~~~g~~l~i~~~~~--------------~~~~v~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~-p-~~~i~ 145 (212)
.|.|.|.|...... ..+.|.. .+..+|.+........+..|+.+.|.|.+.+. | .+.+.
T Consensus 87 ~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~l~V~~---~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~~~~P~~~~v~ 163 (230)
T 3n9g_H 87 RSEDTAVYYCARDWGSNYVWGSYPKYWGQGTLVTVSS---ASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVS 163 (230)
T ss_dssp CGGGCEEEEEEEECCCSSSTTCCEEEECCCEEEEECS---SCCBCCEEEEECCCCCCCTTCEEEEEEEEEEEBSSCCEEE
T ss_pred ChhhCEEEEEEEccCCCCcccccccccCCCEEEEEEe---cCCCCCEEEecCCCccccCCCCEEEEEEEEeEECCCEEEE
Confidence 36777777654321 1122211 11222444422222334579999999999874 4 34688
Q ss_pred EEeCCEEecCC-CCCceEEcCCCC---ceeEEEcCCCCCCCeeEEEEEEcccccceecceEEEEec
Q psy2441 146 WIREMLPVDTS-RNPRYNLLTSGA---PGALQITNSIEEDQGKYECVAENEVGTEYSPSTMLYVKG 207 (212)
Q Consensus 146 W~~~~~~~~~~-~~~~~~~~~~~~---~~~l~i~~~~~~d~g~y~C~a~n~~g~~~~~~~~l~v~~ 207 (212)
| ++..+... .........++. .+.|.|.....+| |.|+|.+.|..+..... ..+.+.+
T Consensus 164 W--~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-~~ytC~v~h~~~~~~~~-~~~~v~~ 225 (230)
T 3n9g_H 164 W--NSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVD-KRVEPKS 225 (230)
T ss_dssp E--GGGTBCTTEEECCCEECTTSCEEEEEEEEEESTTBTT-BCCEEEEEEGGGTEEEE-EECCCCT
T ss_pred E--CCcccCCCeEeCCceECCCCCEEEEEEEEECHHHcCC-CeEEEEEEECCCCcceE-EEccCCC
Confidence 9 44433221 000000111111 2578999999999 99999999988766555 5555544
No 321
>1z9m_A GAPA225; nectin-like, IG-like domain, V domain, cell adhesion; 2.40A {Homo sapiens}
Probab=99.40 E-value=2.6e-12 Score=83.52 Aligned_cols=89 Identities=21% Similarity=0.345 Sum_probs=67.2
Q ss_pred ccCCcceeEecCCcEEEEEeeeeCCCCceEEEe---------CCEEecCCCCCceEEcC-CCCceeEEEcCCCCCCCeeE
Q psy2441 116 TEAPSTKVVEISHTTVLHCSASGNPPPKISWIR---------EMLPVDTSRNPRYNLLT-SGAPGALQITNSIEEDQGKY 185 (212)
Q Consensus 116 ~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~---------~~~~~~~~~~~~~~~~~-~~~~~~l~i~~~~~~d~g~y 185 (212)
...+....+.+|+++.|.|.+.+.+.+.+.|++ ++..+. ..++.... .....+|.|.+++.+|+|.|
T Consensus 42 ~~~p~~~~v~~G~~v~L~C~~~~~~~~~i~W~~~~~~~i~~~~~~~~~---~~r~~~~~~~~~~~~L~I~~v~~~DsG~Y 118 (145)
T 1z9m_A 42 QPWTSDETVVAGGTVVLKCQVKDHEDSSLQWSNPAQQTLYFGEKRALR---DNRIQLVTSTPHELSISISNVALADEGEY 118 (145)
T ss_dssp CCBCCCEEEETTSCEEEEEECSCCTTCCEEEECTTCCEEEETTEECSC---CTTEEEEEECSSEEEEEECSCCGGGCEEE
T ss_pred ecCCceEEEEcCCCEEEEEEEcCCCCcEEEEECCCCcEEEECCceecc---cCCEEEecCCCCeEEEEECCCChhhCEEE
Confidence 445666789999999999999999889999994 322221 24444322 22237899999999999999
Q ss_pred EEEEEcccccceecceEEEEecce
Q psy2441 186 ECVAENEVGTEYSPSTMLYVKGTQ 209 (212)
Q Consensus 186 ~C~a~n~~g~~~~~~~~l~v~~~~ 209 (212)
.|.+.|. |..... +.|.|.+++
T Consensus 119 ~C~~~n~-~~~~~~-~~L~V~~~P 140 (145)
T 1z9m_A 119 TCSIFTM-PVRTAK-SLVTVLGIP 140 (145)
T ss_dssp EEEECSS-SCEEEE-EEEEEECCC
T ss_pred EEEEEcC-CCceEE-EEEEEEeCC
Confidence 9999999 777666 888887754
No 322
>2vr9_A Roundabout 1, ROBO; immunoglobulin-like domain, AXON guidance, cell adhesion, immunoglobulin domain; 3.2A {Drosophila melanogaster} PDB: 2vra_A*
Probab=99.40 E-value=1.3e-12 Score=90.42 Aligned_cols=98 Identities=30% Similarity=0.488 Sum_probs=73.2
Q ss_pred CCCccccCCcceeEecCCcEEEEEeeeeCCCCceEEEeCCEEecCCCC--CceEEcCCCCceeEEEcCCCCCCCeeEEEE
Q psy2441 111 GFPQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREMLPVDTSRN--PRYNLLTSGAPGALQITNSIEEDQGKYECV 188 (212)
Q Consensus 111 ~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~~--~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~ 188 (212)
.+|.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+..... .++....+.....|.|.+++.+|+|.|.|.
T Consensus 8 ~~P~i~~~p~~~~v~~G~~v~L~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~ 87 (217)
T 2vr9_A 8 QSPRIIEHPTDLVVKKNEPATLNCKVEGKPEPTIEWFKDGEPVSTNEKKSHRVQFKDGALFFYRTMQGKKEQDGGEYWCV 87 (217)
T ss_dssp CCCEEEECCCCEEECTTSCEEECCEEECSSCCEEEEEETTEECCCSSSSSSEEECTTSCEEESSCCBSSSCBCCEEEEEE
T ss_pred CCCEEecCCCceEEeCCCcEEEEEEcCCCCCCeEEEEECCcCccCCCccceeEEecCCceEEEEEeccCCcccCceEEEE
Confidence 347888888888899999999999999999999999999998876421 222222221122346888999999999999
Q ss_pred EEcccccceecceEEEEecc
Q psy2441 189 AENEVGTEYSPSTMLYVKGT 208 (212)
Q Consensus 189 a~n~~g~~~~~~~~l~v~~~ 208 (212)
+.|..|........+.|...
T Consensus 88 ~~n~~g~~~~~~~~l~v~~~ 107 (217)
T 2vr9_A 88 AKNRVGQAVSRHASLQIAVL 107 (217)
T ss_dssp EEETTEEEECCCEEEEECEE
T ss_pred EecCCCccccccceEEEEEe
Confidence 99998876543367776653
No 323
>1mq8_A ICAM-1, intercellular adhesion molecule-1, CD54 antigen; IG superfamily, rossmann fold, metal mediated protein interf immune system; HET: NAG; 3.30A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4
Probab=99.37 E-value=1.2e-11 Score=89.39 Aligned_cols=152 Identities=14% Similarity=0.226 Sum_probs=93.1
Q ss_pred EeCCCccEEeeCCeEEEEcccCCCCCCcEEEEe--CCEEe-cCCCC-CeeEEeecCCCCeEEEeeeCC------ccceeE
Q psy2441 33 TEAPSTKVVEISHTTVLHCSASGNPPPKISWIR--EMLPV-DTSRN-PRYNLLTSGAPGTYIKIKPNL------FSPLSV 102 (212)
Q Consensus 33 ~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~k--~g~~l-~~~~~-~~~~~~~~~~~g~~l~i~~~~------~~~~~v 102 (212)
.+.|....|.+|+.+.|.|.+....+..+.|.- .+..+ ..+.. ..+.+....+.+.|.|..... ...+.|
T Consensus 3 ~v~P~~~~V~~G~sv~l~Cs~~c~~p~~~~~~t~l~~~~~~~~g~~~~~~~l~~v~~~~~y~C~~~~~~~~~~~~v~l~V 82 (291)
T 1mq8_A 3 SVSPSKVILPRGGSVLVTCSTSCDQPKLLGIETPLPKKELLLPGNNRKVYELSNVQEDSQPMCYSNCPDGQSTAKTFLTV 82 (291)
T ss_dssp EEECSEEEECTTCEEEEEEEECCSSCSEEEEECSSCCCCCCCSCSSEEEEEEESCCSCCCCEEEEECSSCEEEEECEEEE
T ss_pred EEeCCccEEcCCCeEEEEEeCCCCCCccceEEecCCCcccccCCCceEEEEEEecccCCeEEEEEEcCCccEEEEEEEEE
Confidence 456677889999999999999753333488853 22222 22111 224444443446788987652 223333
Q ss_pred EeecCCCCCCCccccCCcceeEecCCcEEEEEeeeeCCC-C--ceEEEeCCEEecCCCCCceEEcCCCCceeEEEcCCCC
Q psy2441 103 YSADKIPPGFPQITEAPSTKVVEISHTTVLHCSASGNPP-P--KISWIREMLPVDTSRNPRYNLLTSGAPGALQITNSIE 179 (212)
Q Consensus 103 ~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~-~--~i~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~ 179 (212)
+. +|..+.+...+ ..+.+|+.++|.|.+.+.++ . .|.|++++..+.... ...+....++.+.....
T Consensus 83 ~~----~P~~v~I~~~~--~~~~~G~~~~LtC~v~g~~P~~~l~itW~kg~~~l~~~~-----~~~~~~~~~l~~~~~~~ 151 (291)
T 1mq8_A 83 YW----TPERVELAPLP--SWQPVGKNLTLRCQVEGGAPRANLTVVLLRGEKELKREP-----AVGEPAEVTTTVLVRRD 151 (291)
T ss_dssp CB----CCSCCCBCCCC--SBCCSSCCCEEEEEECCCBSTTTEEEEEESSSSEEEEEE-----CCBTTEEEEEECCCSSS
T ss_pred ec----CCCCCEEecCC--ccccCCCCEEEEEEecCccCCCCcEEEEEECCEEeeccc-----CCCCCceEEEEeeeeec
Confidence 33 33334443332 33677999999999977544 3 589999998776431 00111124666666666
Q ss_pred CCCeeEEEEEEccccc
Q psy2441 180 EDQGKYECVAENEVGT 195 (212)
Q Consensus 180 ~d~g~y~C~a~n~~g~ 195 (212)
++.+.|.|.|.|..+.
T Consensus 152 D~g~~~~C~A~~~l~~ 167 (291)
T 1mq8_A 152 HHGANFSCRTELDLRP 167 (291)
T ss_dssp CSSCEEEEEEEEECGG
T ss_pred cCCceEEEEEEecCCc
Confidence 6677999999998663
No 324
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.37 E-value=3.1e-12 Score=98.10 Aligned_cols=95 Identities=29% Similarity=0.473 Sum_probs=73.0
Q ss_pred CCccccCCcceeEecCCcEEEEEeeeeCCCCceEEEeCCE-EecCC-CCCceEEcCCCCceeEEEcCCCCCCCeeEEEEE
Q psy2441 112 FPQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREML-PVDTS-RNPRYNLLTSGAPGALQITNSIEEDQGKYECVA 189 (212)
Q Consensus 112 ~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~-~~~~~-~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~a 189 (212)
+|.+...+....+.+|+.+.|.|.+ +.|.|.+.|++++. .+... ...++....+ ++|.|.+++.+|+|.|+|.|
T Consensus 341 ~P~i~~~~~~~~v~~G~~v~L~C~~-~~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~---~~L~I~~v~~~D~G~Y~C~a 416 (440)
T 3zyj_A 341 APVIVEPPADLNVTEGMAAELKCRA-STSLTSVSWITPNGTVMTHGAYKVRIAVLSD---GTLNFTNVTVQDTGMYTCMV 416 (440)
T ss_dssp CCCEEECCCCEEECTTSCCEECCEE-SSTTSEEEEECTTSCEEESSSCCSSEEECTT---CCEEESSCCSTTCEEEEEEE
T ss_pred CCcccccccceeeccCceEEEEeec-CCCCCceEEEeCCCceeeccCCCceEEEccC---CeEEEccCChhhCEEEEEEE
Confidence 4666667777889999999999999 57889999999543 33332 2345655555 68999999999999999999
Q ss_pred EcccccceecceEEEEecceec
Q psy2441 190 ENEVGTEYSPSTMLYVKGTQVD 211 (212)
Q Consensus 190 ~n~~g~~~~~~~~l~v~~~~~p 211 (212)
.|..|..... +.+.|.+.+.|
T Consensus 417 ~N~~G~~~~~-~~~~v~~~~~~ 437 (440)
T 3zyj_A 417 SNSVGNTTAS-ATLNVTGTHHH 437 (440)
T ss_dssp ECSSCEEEEE-EEEEEC-----
T ss_pred EcCCCcEEEE-EEEEEeccccc
Confidence 9999999888 88888877654
No 325
>1jhl_L IGG1-kappa D11.15 FV (light chain); complex(antibody-antigen); 2.40A {Mus musculus} SCOP: b.1.1.1
Probab=99.37 E-value=8.7e-12 Score=76.85 Aligned_cols=90 Identities=26% Similarity=0.341 Sum_probs=62.8
Q ss_pred cCCcceeEecCCcEEEEEeeeeCCCCceEEEeCCE--E---ec-------CCCCCceEEcCCCCceeEEEcCCCCCCCee
Q psy2441 117 EAPSTKVVEISHTTVLHCSASGNPPPKISWIREML--P---VD-------TSRNPRYNLLTSGAPGALQITNSIEEDQGK 184 (212)
Q Consensus 117 ~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~--~---~~-------~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~ 184 (212)
..+....+.+|+++.|.|.+.+.|.+.+.|+++.. . +. .....++....+.....|.|.++..+|+|.
T Consensus 6 q~p~~~~~~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~ 85 (108)
T 1jhl_L 6 QSPSYLVASPGETITINCRASKSISKSLAWYQEKPGKTNNLLIYSGSTLQSGIPSRFSGSGSGTDFTLTISSLEPEDFAM 85 (108)
T ss_dssp EECSEEEECTTSCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEESSSEEEEEECSCCTTCCSE
T ss_pred ccCCeeEEcCCCCEEEEeEECCCCCceEEEEEECCCCCCEEEEEcCCCcCCCCCceEEEEecCCEEEEEECCCCHHHCEE
Confidence 34556778899999999999998888999998531 1 10 011245554433345789999999999999
Q ss_pred EEEEEEcccccceecceEEEEe
Q psy2441 185 YECVAENEVGTEYSPSTMLYVK 206 (212)
Q Consensus 185 y~C~a~n~~g~~~~~~~~l~v~ 206 (212)
|.|.+.|...........|.|+
T Consensus 86 Y~C~~~n~~~~~fg~gt~L~V~ 107 (108)
T 1jhl_L 86 YICQQHNEYPWTFGGGTKLEIK 107 (108)
T ss_dssp EEEEECSSSSCEECCCEEEEEC
T ss_pred EEEEEccCCccEECCCEEEEEE
Confidence 9999998643222222566654
No 326
>2v44_A NCAM2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, IG, membrane, homphilic, glycoprotein, transmembrane; 1.77A {Homo sapiens} PDB: 2xy2_A* 2vaj_A
Probab=99.36 E-value=8.2e-12 Score=84.57 Aligned_cols=91 Identities=23% Similarity=0.403 Sum_probs=70.4
Q ss_pred cccCCcceeEecCCcEEEEEeeeeCCCCceEEEe-CCEEecCCCCCceEEcCCCCceeEEEcCCCCCCCeeEEEEEEccc
Q psy2441 115 ITEAPSTKVVEISHTTVLHCSASGNPPPKISWIR-EMLPVDTSRNPRYNLLTSGAPGALQITNSIEEDQGKYECVAENEV 193 (212)
Q Consensus 115 ~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~-~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~n~~ 193 (212)
+...+....+.+|+.+.|.|.+.+.|. .+.|++ ++..+... .++....++....|.|.++..+|+|.|.|.+.|..
T Consensus 5 ~~~~~~~~~v~~G~~v~L~C~~~~~p~-~v~W~~~~~~~~~~~--~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~ 81 (189)
T 2v44_A 5 VTISLSKVELSVGESKFFTCTAIGEPE-SIDWYNPQGEKIIST--QRVVVQKEGVRSRLTIYNANIEDAGIYRCQATDAK 81 (189)
T ss_dssp EEESCSEEEEETTCCEEEEEEEEECCS-EEEEECTTSCBCCCC--SSEEEEEETTEEEEEECSCCGGGCEEEEEEEECTT
T ss_pred EEecCCceEEecCCcEEEEEEeecCCe-eEEEEeCCCCccCCC--ceEEEECCCCeEEEEEccCCcccCeEEEEEEEeCC
Confidence 344566677899999999999999887 999999 67666543 55555555445699999999999999999999998
Q ss_pred ccceecceEEEEecc
Q psy2441 194 GTEYSPSTMLYVKGT 208 (212)
Q Consensus 194 g~~~~~~~~l~v~~~ 208 (212)
|......+.|.|...
T Consensus 82 g~~~~~~~~l~v~~~ 96 (189)
T 2v44_A 82 GQTQEATVVLEIYQK 96 (189)
T ss_dssp SCEEEEEEEEEEECC
T ss_pred CCcEEEEEEEEEecC
Confidence 876443366666543
No 327
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=99.36 E-value=5.7e-12 Score=99.39 Aligned_cols=90 Identities=23% Similarity=0.397 Sum_probs=77.8
Q ss_pred CccccCCcceeEecCCcEEEEEeeeeCCCCceEEEeCCEEecCCCCCceEEcCCCCceeEEEcCCCCCCCeeEEEEEEcc
Q psy2441 113 PQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREMLPVDTSRNPRYNLLTSGAPGALQITNSIEEDQGKYECVAENE 192 (212)
Q Consensus 113 p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~n~ 192 (212)
|.+...+....+.+|+++.|.|.+.|.|.|.+.|++++..+..+ .++....++...+|.|.++.++|+|.|+|.|.|.
T Consensus 483 P~~~~~~~~~~v~~G~~~~~~~~v~g~P~P~v~W~k~~~el~~s--~~~~i~~~~~~~~L~I~~~~~~D~G~Yt~~A~N~ 560 (573)
T 3uto_A 483 PRFIVKPYGTEVGEGQSANFYCRVIASSPPVVTWHKDDRELKQS--VKYMKRYNGNDYGLTINRVKGDDKGEYTVRAKNS 560 (573)
T ss_dssp CEEEECCCCEEECTTSCEEEEEEEECSSCCEEEEEETTEECCSS--SSEEEEEETTEEEEEECSCCGGGCEEEEEEEEET
T ss_pred CccccCCCCcEEeCCCcEEEEEEEEccCCCeEEEEECCEEcccC--CcEEEEEcCCEEEEEEcCCCcccCcEEEEEEEeC
Confidence 56666667788999999999999999999999999999998875 5666655555678999999999999999999999
Q ss_pred cccceecceEEEE
Q psy2441 193 VGTEYSPSTMLYV 205 (212)
Q Consensus 193 ~g~~~~~~~~l~v 205 (212)
.|..... +.|.|
T Consensus 561 ~G~~~~~-v~l~V 572 (573)
T 3uto_A 561 YGTKEEI-VFLNV 572 (573)
T ss_dssp TEEEEEE-EEEEE
T ss_pred CCcEEEE-EEEEE
Confidence 9999877 77766
No 328
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.35 E-value=1.9e-12 Score=100.26 Aligned_cols=84 Identities=30% Similarity=0.599 Sum_probs=67.7
Q ss_pred CcceeEecCCcEEEEEeeeeCCCCceEEEeCCEEecCC-CCCceEEcCCCCceeEEEcCCCCCCCeeEEEEEEcccccce
Q psy2441 119 PSTKVVEISHTTVLHCSASGNPPPKISWIREMLPVDTS-RNPRYNLLTSGAPGALQITNSIEEDQGKYECVAENEVGTEY 197 (212)
Q Consensus 119 ~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~-~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~n~~g~~~ 197 (212)
+....+.+|+.+.|.|.+.|.|.|.+.|++++..+... ...++....+ ++|.|.+++.+|+|.|+|.|.|..|...
T Consensus 392 ~~~~~v~~G~~v~l~C~~~g~P~p~i~W~~~~~~~~~~~~~~~~~~~~~---~~L~i~~v~~~d~G~Y~C~a~N~~g~~~ 468 (477)
T 2id5_A 392 AQQVFVDEGHTVQFVCRADGDPPPAILWLSPRKHLVSAKSNGRLTVFPD---GTLEVRYAQVQDNGTYLCIAANAGGNDS 468 (477)
T ss_dssp CEEEEEETTCCEEECCCEEEESCCEEEEECTTSCBC-------CEECTT---SCEEESSCCSTTCEEEEEEEEETTEEEE
T ss_pred cccEEEeCCCeEEEEEeccccCCCEEEEEECCccccccCCCceEEeCCC---CEEEEeeCChHHCEEEEEEEEeCCCcEE
Confidence 45577899999999999999999999999998776542 2345555555 6899999999999999999999999987
Q ss_pred ecceEEEEe
Q psy2441 198 SPSTMLYVK 206 (212)
Q Consensus 198 ~~~~~l~v~ 206 (212)
.. +.+.|+
T Consensus 469 ~~-~~l~V~ 476 (477)
T 2id5_A 469 MP-AHLHVR 476 (477)
T ss_dssp EE-EEEEEE
T ss_pred EE-EEEEEe
Confidence 66 777775
No 329
>3r08_E T-cell surface glycoprotein CD3 epsilon chain; antibody, T-cell receptor, signalling, immune SY; 4.10A {Cricetulus migratorius}
Probab=99.35 E-value=3.6e-13 Score=77.83 Aligned_cols=60 Identities=18% Similarity=0.300 Sum_probs=49.3
Q ss_pred CcceeEecCCcEEEEEeeeeCCCCceEEEeCCEEecCCCCCceEEcCCCCceeEEEcCC-CCCCCeeEEEEEEc
Q psy2441 119 PSTKVVEISHTTVLHCSASGNPPPKISWIREMLPVDTSRNPRYNLLTSGAPGALQITNS-IEEDQGKYECVAEN 191 (212)
Q Consensus 119 ~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~-~~~d~g~y~C~a~n 191 (212)
+....+..|+++.|+|.+.+.|. |.|+|++..++.. .+ .+|.|.++ ..+|+|.|.|.|.+
T Consensus 6 p~~~v~~~G~~v~L~C~~~g~P~--i~W~kdg~~l~~~--------~~---~~L~I~~v~~~~DsG~Y~C~A~t 66 (82)
T 3r08_E 6 IEYKVSISGTSVELTCPLDSDEN--LKWEKNGQELPQK--------HD---KHLVLQDFSEVEDSGYYVCYTPA 66 (82)
T ss_dssp CCCEEEEETTEEEEECSSCCCSS--CEEEETTEECTTC--------CS---SCCBCCSCCTTTTCSCEEEECSS
T ss_pred CceeEEEcCCeEEEEEECCCCCc--EEEEECCEECcCC--------CC---CEEEECccCccCcCEEEEEEEcc
Confidence 44455677999999999999984 9999999987642 12 68999996 77999999999976
No 330
>3ojm_B Fibroblast growth factor receptor 2; beta trefoil motif, immunoglobulin-like domain, growth facto factor receptor, extracellular; 2.10A {Homo sapiens} PDB: 1nun_B* 3oj2_C 2fdb_P 1iil_E 1ev2_E 1e0o_B* 1ii4_E 1djs_A 3ojv_C* 1cvs_C 1fq9_C* 1evt_C
Probab=99.35 E-value=3.9e-12 Score=88.74 Aligned_cols=86 Identities=26% Similarity=0.473 Sum_probs=68.2
Q ss_pred cceeEecCCcEEEEEeeeeCCCCceEEEeCCEEecCCCC-CceEEcCCCCceeEEEcCCCCCCCeeEEEEEEccccccee
Q psy2441 120 STKVVEISHTTVLHCSASGNPPPKISWIREMLPVDTSRN-PRYNLLTSGAPGALQITNSIEEDQGKYECVAENEVGTEYS 198 (212)
Q Consensus 120 ~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~~-~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~n~~g~~~~ 198 (212)
....+.+|+.+.|.|.+.+.|.+.+.|++++..+..... ........ ...|.|.+++.+|+|.|.|.+.|..|....
T Consensus 27 ~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~--~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~ 104 (231)
T 3ojm_B 27 RLHAVPAANTVKFRCPAGGNPMPTMRWLKNGKEFKQEHRIGGYKVRNQ--HWSLIMESVVPSDKGNYTCVVENEYGSINH 104 (231)
T ss_dssp SCEEEETTSCEEEECCEEEESCCEEEEEETTEECCGGGSTTCCEEEGG--GTEEEECSCCGGGCEEEEEEEEETTEEEEE
T ss_pred eeEEEccCCCEEEEEecccCCCCeEEEEECCccccccccccceeeecC--cceEEEecCCcccCEEEEEEEecccCcccc
Confidence 567789999999999999999999999999988865411 11122222 258999999999999999999999888766
Q ss_pred cceEEEEecc
Q psy2441 199 PSTMLYVKGT 208 (212)
Q Consensus 199 ~~~~l~v~~~ 208 (212)
. ..+.|.+.
T Consensus 105 ~-~~l~V~~~ 113 (231)
T 3ojm_B 105 T-YHLDVVER 113 (231)
T ss_dssp E-EEEEEECC
T ss_pred c-EEEEEEcC
Confidence 6 77777653
No 331
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.33 E-value=3.2e-12 Score=98.29 Aligned_cols=94 Identities=23% Similarity=0.487 Sum_probs=71.7
Q ss_pred CCccccCCcceeEecCCcEEEEEeeeeCCCCceEEEeCC-EEecCC-CCCceEEcCCCCceeEEEcCCCCCCCeeEEEEE
Q psy2441 112 FPQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREM-LPVDTS-RNPRYNLLTSGAPGALQITNSIEEDQGKYECVA 189 (212)
Q Consensus 112 ~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~-~~~~~~-~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~a 189 (212)
+|.+...+....+.+|+.+.|.|.+. |.|.+.|++++ ...... ...++....+ ++|.|.+++.+|+|.|+|.|
T Consensus 352 ~P~i~~~~~~~~v~~G~~~~l~C~~~--p~p~i~W~~~~~~~~~~~~~~~~~~~~~~---g~L~i~~v~~~D~G~Y~C~a 426 (452)
T 3zyi_A 352 APFIMDAPRDLNISEGRMAELKCRTP--PMSSVKWLLPNGTVLSHASRHPRISVLND---GTLNFSHVLLSDTGVYTCMV 426 (452)
T ss_dssp CCCCSBCCCCEECCTTSCCEECCBCC--TTSEEEEECTTSCEECSSCCCSSCEECTT---SCEECSSCCTTCCEEEEEEE
T ss_pred CcccccccccccccCCCEEEEEEeCC--CCCcEEEEeCCCcEeccCCCCCCEEECCC---CeEEEeecCHHHCEEEEEEE
Confidence 46666667778899999999999998 88999999954 444332 2345655555 68999999999999999999
Q ss_pred EcccccceecceEEEEecceec
Q psy2441 190 ENEVGTEYSPSTMLYVKGTQVD 211 (212)
Q Consensus 190 ~n~~g~~~~~~~~l~v~~~~~p 211 (212)
.|..|..... +.+.|.+.+.|
T Consensus 427 ~N~~G~~~~~-~~l~v~~~~~~ 447 (452)
T 3zyi_A 427 TNVAGNSNAS-AYLNVSTAGTH 447 (452)
T ss_dssp ECSSCEEEEE-EEEEC------
T ss_pred EcCCCcEEEE-EEEEEEccccc
Confidence 9999999887 88888776554
No 332
>3k0w_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1, isoform 2; hydrolase, immunoglobulin domain, nucleus, protease; 2.80A {Homo sapiens}
Probab=99.33 E-value=1.2e-11 Score=85.88 Aligned_cols=85 Identities=25% Similarity=0.377 Sum_probs=71.0
Q ss_pred CccccCCcceeEecCCcEEEEEeeeeCCCCceEEEeCCEEecCCCCCceEEcCCCCceeEEEcCCCCCCCeeEEEEEEcc
Q psy2441 113 PQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREMLPVDTSRNPRYNLLTSGAPGALQITNSIEEDQGKYECVAENE 192 (212)
Q Consensus 113 p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~n~ 192 (212)
+.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+.... + ..|.|.+++.+|+|.|.|.+.|.
T Consensus 19 ~~i~~~p~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~--------~---~~L~i~~v~~~d~G~Y~C~~~n~ 87 (218)
T 3k0w_A 19 SKITVNPESKAVLAGQFVKLCCRATGHPFVQYQWFKMNKEIPNGN--------T---SELIFNAVHVKDAGFYVCRVNNN 87 (218)
T ss_dssp CCEEECCCCEEEETTSBEEEECEETTTTSSEEEEEETTEECTTCC--------S---SEEEETTCCGGGCEEEEEEEECT
T ss_pred CEEEECCCCeEEeCCCcEEEEeeecCCCCCEEEEEECCEECCCCC--------C---CEEEEccCChhhCeEeEEEEEcC
Confidence 677778888889999999999999999999999999998876531 1 68999999999999999999999
Q ss_pred cccceecceEEEEecc
Q psy2441 193 VGTEYSPSTMLYVKGT 208 (212)
Q Consensus 193 ~g~~~~~~~~l~v~~~ 208 (212)
.|......+.|.|...
T Consensus 88 ~~~~~s~~~~l~V~~~ 103 (218)
T 3k0w_A 88 FTFEFSQWSQLDVCDI 103 (218)
T ss_dssp TCCEECCCEEEEEECC
T ss_pred CCCceeeEEEEEEEcc
Confidence 8866444467777654
No 333
>3rbs_A Myomesin-1; immunoglobulin C-SET domain, contractIle protein; 1.85A {Homo sapiens}
Probab=99.33 E-value=1.3e-11 Score=85.17 Aligned_cols=84 Identities=11% Similarity=0.089 Sum_probs=61.7
Q ss_pred CccccCCcceeEecCCcEEEEEeee-eCCCCceEEEeCCEEecCCCCCceEEcCCCCceeEEEcCCCCCCCeeEEEEEEc
Q psy2441 113 PQITEAPSTKVVEISHTTVLHCSAS-GNPPPKISWIREMLPVDTSRNPRYNLLTSGAPGALQITNSIEEDQGKYECVAEN 191 (212)
Q Consensus 113 p~~~~~~~~~~~~~g~~~~l~C~~~-~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~n 191 (212)
|.|.. +....+.+|+.+.|.|.+. +.|.|.+.|++|+..+......++......+...|.|.++..+|+|.|+|.|.|
T Consensus 4 p~~~~-~~~~~v~eg~~v~l~c~~~~~~P~p~i~W~kng~~l~~~~~~~~~~~~~~g~~~L~I~~v~~~D~G~Y~C~a~N 82 (207)
T 3rbs_A 4 PFTKS-ELAVEILEKGQVRFWMQAEKLSGNAKVNYIFNEKEIFEGPKYKMHIDRNTGIIEMFMEKLQDEDEGTYTFQLQD 82 (207)
T ss_dssp --CCE-EEEEEECGGGCEEEEEECSCCCSCCEEEEEETTEEECSSSSCEEEECTTTCEEEEEESCCCGGGCEEEEEEEEE
T ss_pred Ceeec-CCceEEEeCCeEEEEEEEecCCCCCEEEEEECCEECccCCCEEEEEeCCCCEEEEEECCCChhhCEEEEEEEEC
Confidence 44443 3456788999999999996 479999999999999987533333332222345799999999999999999999
Q ss_pred ccccceec
Q psy2441 192 EVGTEYSP 199 (212)
Q Consensus 192 ~~g~~~~~ 199 (212)
|.+...
T Consensus 83 --g~a~~~ 88 (207)
T 3rbs_A 83 --GKATNH 88 (207)
T ss_dssp --TTEEEE
T ss_pred --CCeEEE
Confidence 444433
No 334
>1epf_A NCAM, protein (neural cell adhesion molecule); immunoglobulin fold, glycoprotein; 1.85A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 PDB: 2ncm_A 3ncm_A
Probab=99.33 E-value=1.7e-11 Score=83.10 Aligned_cols=94 Identities=21% Similarity=0.401 Sum_probs=69.9
Q ss_pred CccccCCcceeEecCCcEEEEEeeeeCC-CCceEEEe-CCEEecCCCCCceEEcCC-CCceeEEEcCCCCCCCeeEEEEE
Q psy2441 113 PQITEAPSTKVVEISHTTVLHCSASGNP-PPKISWIR-EMLPVDTSRNPRYNLLTS-GAPGALQITNSIEEDQGKYECVA 189 (212)
Q Consensus 113 p~~~~~~~~~~~~~g~~~~l~C~~~~~p-~~~i~W~~-~~~~~~~~~~~~~~~~~~-~~~~~l~i~~~~~~d~g~y~C~a 189 (212)
+.+...+....+.+|+.+.|.|.+.+.+ .+.+.|++ ++..+... ..++....+ .....|.|.++..+|+|.|.|.+
T Consensus 3 ~~v~~~p~~~~v~~G~~v~l~C~~~~~~~~~~v~W~~~~g~~~~~~-~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~ 81 (191)
T 1epf_A 3 LQVDIVPSQGEISVGESKFFLCQVAGDAKDKDISWFSPNGEKLSPN-QQRISVVWNDDDSSTLTIYNANIDDAGIYKCVV 81 (191)
T ss_dssp CCEEEESSSEEEETTCCEEEEEEECCCSCCCEEEEECTTSCEECCB-SSSEEEEEEETTEEEEEECSCCGGGCEEEEEEE
T ss_pred eEEEecCCCcEEcCCCCEEEEEECCCCCCCceEEEEeCCCccccCC-CCeEEEEECCCCceEEEEccCCcccCEEEEEEE
Confidence 4566677778889999999999999876 78999999 88777643 344444321 23479999999999999999999
Q ss_pred EcccccceecceEEEEec
Q psy2441 190 ENEVGTEYSPSTMLYVKG 207 (212)
Q Consensus 190 ~n~~g~~~~~~~~l~v~~ 207 (212)
.|..|......+.|.|..
T Consensus 82 ~~~~~~~~~~~~~l~v~~ 99 (191)
T 1epf_A 82 TAEDGTQSEATVNVKIFQ 99 (191)
T ss_dssp EETTTEEEEEEEEEEEEC
T ss_pred EcCCCcceEEEEEEEeec
Confidence 998743322225555543
No 335
>3p2t_A Leukocyte immunoglobulin-like receptor subfamily 4; LILR, IG, inhibitory receptor, disulfide, immune system; 1.70A {Homo sapiens}
Probab=99.33 E-value=3.6e-12 Score=87.04 Aligned_cols=90 Identities=20% Similarity=0.338 Sum_probs=66.0
Q ss_pred CccccCCcceeEecCCcEEEEEeeeeCCCCceEEEeCCEEecCCCCCceEEcCCCCceeEEEcCCCCCCCeeEEEEEEcc
Q psy2441 113 PQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREMLPVDTSRNPRYNLLTSGAPGALQITNSIEEDQGKYECVAENE 192 (212)
Q Consensus 113 p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~n~ 192 (212)
|.+...+.. .+.+|+.+.|.|.+.+ +.+.+.|++++..+... .. ..........|.|.+++.+|+|.|.|.|.|.
T Consensus 6 P~i~~~p~~-~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~--~~-~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~ 80 (196)
T 3p2t_A 6 PTLWAEPGS-VISWGNSVTIWCQGTL-EAREYRLDKEESPAPWD--RQ-NPLEPKNKARFSIPSMTEDYAGRYRCYYRSP 80 (196)
T ss_dssp CEEEEESCS-EEETTCCEEEEEECCT-TCCEEEEEETTSCSCSE--EE-CCCSSSSEEEEEESSCCGGGCEEEEEEEEET
T ss_pred CEEEccCCC-cCCCCCcEEEEeeCCC-CCCEEEEEECCCCCccc--cc-ccccCCceEEEEeccCCcccCceEEEEEeCC
Confidence 666666666 7889999999999988 67899999998776532 11 0111112378999999999999999999999
Q ss_pred ccc-ceecceEEEEec
Q psy2441 193 VGT-EYSPSTMLYVKG 207 (212)
Q Consensus 193 ~g~-~~~~~~~l~v~~ 207 (212)
.|. .....+.|.|..
T Consensus 81 ~g~~~~s~~~~l~V~~ 96 (196)
T 3p2t_A 81 VGWSQPSDPLELVMTG 96 (196)
T ss_dssp TEEBCCCCCEEEEEEC
T ss_pred CcccCCCccEEEEecC
Confidence 882 333336777754
No 336
>3sob_H Antibody heavy chain, low-density lipoprotein receptor-related protein; beta propeller, protein binding-immune system complex; 1.90A {Homo sapiens} PDB: 1pkq_B 3uls_H 3ulu_D* 3ulv_D*
Probab=99.33 E-value=2.6e-11 Score=86.31 Aligned_cols=164 Identities=18% Similarity=0.250 Sum_probs=89.8
Q ss_pred CccEEeeCCeEEEEcccCCC--CCCcEEEEeCC-----EEe------------cCCCCCeeEEeec--------------
Q psy2441 37 STKVVEISHTTVLHCSASGN--PPPKISWIREM-----LPV------------DTSRNPRYNLLTS-------------- 83 (212)
Q Consensus 37 ~~~~v~~g~~v~l~C~~~~~--p~~~v~W~k~g-----~~l------------~~~~~~~~~~~~~-------------- 83 (212)
....+.+|++++|.|.+.+. ....+.|||.. ..+ ......|+.+...
T Consensus 31 ~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~ 110 (256)
T 3sob_H 31 GGGLVQPGGSLRLSCAASGFTFTNSYIHWVRQAPGKGLEWVGWITPYGGYTNYADSVKGRFTISADTSKNTAYLQMNSLR 110 (256)
T ss_dssp CCCEECTTCCEEEEEEEESSCGGGSCEEEEEECTTCCCEEEEEEETTTTEEEECTTTTTTEEEEEEGGGTEEEEEECSCC
T ss_pred CcEEEcCCCCEEEEEEeeccccCCCEEEEEEECCCCCcEEEEEEecCCCceecCCCCCCcEEEEEeCCCCEEEEEECCCC
Confidence 45779999999999998653 24579999831 111 0111245544321
Q ss_pred -CCCCeEEEeeeCCc-----------------cceeEEeecCCCCCCCccccCCcceeEecCCcEEEEEeeee-CC-CCc
Q psy2441 84 -GAPGTYIKIKPNLF-----------------SPLSVYSADKIPPGFPQITEAPSTKVVEISHTTVLHCSASG-NP-PPK 143 (212)
Q Consensus 84 -~~~g~~l~i~~~~~-----------------~~~~v~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~-~p-~~~ 143 (212)
+|.|.|.|...... ..+.|.. .+..+|.+........+.+|+.+.|.|.+.+ .| .+.
T Consensus 111 ~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~l~V~~---~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~~~~p~~~~ 187 (256)
T 3sob_H 111 AEDTAVYYCARGSGHVNAVKNYGYVMDYWGQGTLVTVSS---ASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVT 187 (256)
T ss_dssp GGGCEEEEEEEESSCTTCSSCCTTSEEEECCCEEEEECS---SCCBCCEEEEECCC-----TTEEEEEEEEEEEBSSCCE
T ss_pred cccCEEEEEEEecCCCccccccccceeEECCCEEEEEec---CCCCCCEEEEECCCcccccCCcEEEEEEEEEEECCCeE
Confidence 37777777665321 1222221 1122244442222233567999999999987 44 347
Q ss_pred eEEEeCCEEecCC-CCCceEEcCCCC---ceeEEEcCCCCCCCeeEEEEEEcccccceecceEEEEec
Q psy2441 144 ISWIREMLPVDTS-RNPRYNLLTSGA---PGALQITNSIEEDQGKYECVAENEVGTEYSPSTMLYVKG 207 (212)
Q Consensus 144 i~W~~~~~~~~~~-~~~~~~~~~~~~---~~~l~i~~~~~~d~g~y~C~a~n~~g~~~~~~~~l~v~~ 207 (212)
+.| ++..+... .........++. .+.|.|.....+| |.|+|.+.|..+..... ..+.+.+
T Consensus 188 v~W--~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d-~~ytC~v~~~~~~~~~~-~~~~~~~ 251 (256)
T 3sob_H 188 VSW--NSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVD-KKVEPKS 251 (256)
T ss_dssp EEE--GGGTBCTTEEECCCEECTTSCEEEEEEEEEEGGGTTT-CCCEEEEEEGGGTEEEE-EECCCC-
T ss_pred EEE--CCcccCCCeEeCCceeCCCCCEEEEEEEEECHHHcCC-ceEEEEEEeCCCCcceE-EEecccC
Confidence 889 44333221 000000111111 2578899888889 99999999988766554 5554443
No 337
>1ypz_E T cell receptor delta, beta-2-microglobulin; H2-T22 protein, T cell receptor delta, immune system; HET: NAG MAN FUC; 3.40A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.33 E-value=4.6e-11 Score=82.33 Aligned_cols=152 Identities=18% Similarity=0.248 Sum_probs=85.1
Q ss_pred EEeCCCccEEeeCCeEEEEcccCCCCCCcEEEEeCC--E---Eec-----CCCCCeeEEee--------------c--CC
Q psy2441 32 ITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREM--L---PVD-----TSRNPRYNLLT--------------S--GA 85 (212)
Q Consensus 32 ~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~k~g--~---~l~-----~~~~~~~~~~~--------------~--~~ 85 (212)
+...|..+.+.+|+++.|.|.+.+.+ +.+.|||.. . .+. .....|+.+.. . .|
T Consensus 4 v~q~p~~v~v~~G~~v~L~C~~~~~~-~~v~W~r~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~~L~I~~v~~~D 82 (207)
T 1ypz_E 4 VEQSPSALSLHEGTDSALRCNFTTTM-RSVQWFRQNSRGSLISLFYLASGTKENGRLKSAFDSKERRYSTLHIRDAQLED 82 (207)
T ss_dssp EEESCSEEEEETTCCEEEEEEESSCC-SEEEEEEECTTSCCEEEEEESSEEEEETTEEEEECTTTCSEEEEEECSCCGGG
T ss_pred cEECCCeEEEccCCcEEEEEEEeCCC-eEEEEEEeCCCCCeEEEEEEccCCccCCCEEEEeccCCCCEEEEEECCCCHHH
Confidence 45667788999999999999997654 479999842 1 110 00113444332 1 36
Q ss_pred CCeEEEeeeCCc-----------------cceeEEeecCCCCCCCccccCCcceeEecCCcEEEEEeeeeC-CC-CceEE
Q psy2441 86 PGTYIKIKPNLF-----------------SPLSVYSADKIPPGFPQITEAPSTKVVEISHTTVLHCSASGN-PP-PKISW 146 (212)
Q Consensus 86 ~g~~l~i~~~~~-----------------~~~~v~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~-p~-~~i~W 146 (212)
.|.|.|...... ..|.|.... .....|. ..+.. ..+.|.|.+.+. |. +.+.|
T Consensus 83 ~G~Y~C~~~~~~~~~p~~~~~~~~~~~~~t~L~V~~~~-------~~~~~P~-v~~~~-~~~~l~C~~~g~~P~~~~v~W 153 (207)
T 1ypz_E 83 SGTYFCAADTWHISEGYELGTDKLVFGQGTQVTVEPKS-------QPPAKPS-VFIMK-NGTNVACLVKDFYPKEVTISL 153 (207)
T ss_dssp CEEEEEEEECBCCCTTCCCCCCCCEECCCEEEEEECCC-------CCCCCCE-EEEEE-ETTEEEEEEEEESSSCCEEEE
T ss_pred CEEEEEEEecCCcccccccccceeeecCccEEEEccCC-------CCCCCCe-EEEeC-CCCeEEEEEeeEeCCCeEEEE
Confidence 667777654321 122222110 0001111 11222 237999999874 44 69999
Q ss_pred EeCCEEecCCCCCceEEcCCCCceeEEEcCCCC-CCCeeEEEEEEccccccee
Q psy2441 147 IREMLPVDTSRNPRYNLLTSGAPGALQITNSIE-EDQGKYECVAENEVGTEYS 198 (212)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~-~d~g~y~C~a~n~~g~~~~ 198 (212)
+++ ..+... ...+....+ +.+.+..... +|.|.|+|.+.|..+....
T Consensus 154 ~~~-~~l~~~-~~~~~~~~~---g~y~~~~~~~~~~~~~ytC~v~~~~~~~~~ 201 (207)
T 1ypz_E 154 RSS-KKIVEF-DPAIVISPS---GKYSAVKLGQYGDSNSVTCSVQHNSETVHS 201 (207)
T ss_dssp ECS-SEEEEC-CCEEEECTT---SSEEEEECEEESSTTTCEEEEEETTEEEES
T ss_pred ecC-CcccCC-ccceEEcCC---CcEEEEEeecccCCCcEEEEEEECCccEec
Confidence 999 665432 122222223 3344433333 6789999999998776543
No 338
>1xau_A B- and T-lymphocyte attenuator; IG domain, beta sandwich, structural genomics, PSI, protein structure initiative; 1.80A {Mus musculus} SCOP: b.1.1.4
Probab=99.33 E-value=3.3e-11 Score=71.86 Aligned_cols=86 Identities=15% Similarity=0.234 Sum_probs=63.4
Q ss_pred eeEecCCcEEEEEeeee-CCCCceEEEeCC----EEecCCCCC---ceEEcCCCCceeEEEcCCCCCCCeeEEEEEEccc
Q psy2441 122 KVVEISHTTVLHCSASG-NPPPKISWIREM----LPVDTSRNP---RYNLLTSGAPGALQITNSIEEDQGKYECVAENEV 193 (212)
Q Consensus 122 ~~~~~g~~~~l~C~~~~-~p~~~i~W~~~~----~~~~~~~~~---~~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~n~~ 193 (212)
..+..|+++.|.|.+.+ .+.|++.|.|.+ .+++.. .. .+....+.....|.+.++...|+|.|.|.|.|..
T Consensus 24 ~tv~~G~~~~LeCpv~yc~~rPnVtWcK~~~~~c~~L~~~-~q~~~~w~e~~n~s~fiL~f~~V~~sDsG~YrCsAn~~~ 102 (122)
T 1xau_A 24 HSAWTGELFKIECPVKYCVHRPNVTWCKHNGTIWVPLEVG-PQLYTSWEENRSVPVFVLHFKPIHLSDNGSYSCSTNFNS 102 (122)
T ss_dssp EEECTTSCEEEEEEEECSSSCCCEEEEEECSSSEEECCCB-TTEEEEEECSSSSCEEEEEETTCCGGGCEEEEEEEEETT
T ss_pred EEEecCCeEEEEeEecCCCCCCcEEEEecCCeeccccccc-eeeecceeccCCceeEEEEEeeEEEcCCccEEEEeeCCC
Confidence 66888999999999966 679999999854 333322 11 1111122224689999999999999999999999
Q ss_pred ccceecceEEEEecc
Q psy2441 194 GTEYSPSTMLYVKGT 208 (212)
Q Consensus 194 g~~~~~~~~l~v~~~ 208 (212)
|...+...++.|++.
T Consensus 103 g~ieSHs~ti~V~~~ 117 (122)
T 1xau_A 103 QVINSHSVTIHVRER 117 (122)
T ss_dssp EEEECCCEEEEEC--
T ss_pred CceeeeEEEEEEEee
Confidence 988887788888765
No 339
>4fa8_A Secreted protein BARF1; immunoglobulin-like domains, 4-helix bundle fold, viral PROT cytokine complex; HET: NAG BMA; 2.20A {Human herpesvirus 4} PDB: 2ch8_A* 3uez_A* 4adf_A* 4adq_A*
Probab=99.32 E-value=6.6e-12 Score=86.27 Aligned_cols=86 Identities=15% Similarity=0.123 Sum_probs=63.6
Q ss_pred eeEecCCcEEEEEe---eeeCCCCceEEEeCCEEecC---------------CCCCceEEcCCCCceeEEEcCCCCCCCe
Q psy2441 122 KVVEISHTTVLHCS---ASGNPPPKISWIREMLPVDT---------------SRNPRYNLLTSGAPGALQITNSIEEDQG 183 (212)
Q Consensus 122 ~~~~~g~~~~l~C~---~~~~p~~~i~W~~~~~~~~~---------------~~~~~~~~~~~~~~~~l~i~~~~~~d~g 183 (212)
.++..|+.+.|.|. +.+.|.+.+.|++++..... ....++..........|.|.++..+|+|
T Consensus 3 Vta~~Ge~v~L~C~~~~v~~~p~~~V~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G 82 (203)
T 4fa8_A 3 VTAFLGERVTLTSYWRRVSLGPEIEVSWFKLGPGEEQVLIGRMHHDVIFIEWPFRGFFDIHRSANTFFLVVTAANISHDG 82 (203)
T ss_dssp CEEETTCCEEEEEECSSTTCSTTSEEEEEEEETTTEEEEEEEEETTEEEECGGGBTTEEEEEETTEEEEEESSCCGGGCE
T ss_pred eEEEcCCCEEEEeeeeccCCCCCcEEEEEEcCCCcceEEEEecCCceEEeeccccceEEEEEcCCEEEEEEccCCHHHCe
Confidence 46788999999995 56789999999997632211 0112233333333478999999999999
Q ss_pred eEEEEEEcccccceecceEEEEecc
Q psy2441 184 KYECVAENEVGTEYSPSTMLYVKGT 208 (212)
Q Consensus 184 ~y~C~a~n~~g~~~~~~~~l~v~~~ 208 (212)
.|.|.|.|..|..... +.|.|..+
T Consensus 83 ~Y~C~a~n~~g~~~~~-~~l~V~~p 106 (203)
T 4fa8_A 83 NYLCRMKLGETEVTKQ-EHLSVVKP 106 (203)
T ss_dssp EEEEEEEETTEEEEEE-EEEEEEEE
T ss_pred EEEEEEEcCCCcEEEE-EEEEecCC
Confidence 9999999999988776 77777654
No 340
>2qsq_A Carcinoembryonic antigen-related cell adhesion MO; glycoprotein, GPI-anchor, immunoglobulin DOMA lipoprotein, membrane; 1.95A {Homo sapiens} PDB: 2qst_A 2ver_N* 2gk2_A
Probab=99.31 E-value=2.5e-11 Score=74.96 Aligned_cols=82 Identities=17% Similarity=0.074 Sum_probs=60.1
Q ss_pred eeEecCCcEEEEEeeeeCCCCceEEEeCCEEec-----------------CCCCCceEEcCCCCceeEEEcCCCCCCCee
Q psy2441 122 KVVEISHTTVLHCSASGNPPPKISWIREMLPVD-----------------TSRNPRYNLLTSGAPGALQITNSIEEDQGK 184 (212)
Q Consensus 122 ~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~-----------------~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~ 184 (212)
..+.+|+++.|.|.......+.+.|+++..... .....|..+..+ ++|.|.+++.+|+|.
T Consensus 10 ~~~~~G~~v~L~~~~~p~~~~~i~W~kg~~~~~~~~I~~y~~~~~~~~~~~~~~gR~~~~~n---gSL~I~nvt~~D~G~ 86 (111)
T 2qsq_A 10 FNVAEGKEVLLLVHNLPQHLFGYSWYKGERVDGNRQIIGYVIGTQQATPGPAYSGREIIYPN---ASLLIQNIIQNDAGF 86 (111)
T ss_dssp SEEETTSCEEEEEESCCSSEEEEEEEESSSCCGGGEEEEEETTTTEEEECTTCCSCEEECTT---SCEEECSCCGGGCEE
T ss_pred ceeccCCCEEEEEeCCCCCceEEEEEeCCCCCCCcEEEEEECCCcceecCcccCCcEEEecC---CcEEEccCcccCCeE
Confidence 357889999999986433345799999763221 112467777777 799999999999999
Q ss_pred EEEEEEccccc-ceecceEEEEec
Q psy2441 185 YECVAENEVGT-EYSPSTMLYVKG 207 (212)
Q Consensus 185 y~C~a~n~~g~-~~~~~~~l~v~~ 207 (212)
|+|.+.+..+. .... +.|.|..
T Consensus 87 Ytc~v~~~~~~~~~~~-~~L~V~~ 109 (111)
T 2qsq_A 87 YTLHVIKSDLVNEEAT-GQFRVYP 109 (111)
T ss_dssp EEEEEEETTSCCEEEE-EEEEEEC
T ss_pred EEEEEEeCCCcEEEEE-EEEEEec
Confidence 99999998664 3333 6666654
No 341
>2v9r_A Roundabout homolog 1; proto-oncogene, differentiation, phosphorylation, disease MU neuronal development, immunoglobulin domain, chemotaxis; 2.00A {Homo sapiens} PDB: 2v9q_A
Probab=99.30 E-value=9.5e-12 Score=85.67 Aligned_cols=97 Identities=32% Similarity=0.479 Sum_probs=70.6
Q ss_pred CCccccCCcceeEecCCcEEEEEeeeeCCCCceEEEeCCEEecCCCC---CceEEcCCCC--ceeEEEcCCCCCCCeeEE
Q psy2441 112 FPQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREMLPVDTSRN---PRYNLLTSGA--PGALQITNSIEEDQGKYE 186 (212)
Q Consensus 112 ~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~~---~~~~~~~~~~--~~~l~i~~~~~~d~g~y~ 186 (212)
+|.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+..... .......++. ...|.|.++..+|+|.|.
T Consensus 9 pp~i~~~p~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~ 88 (212)
T 2v9r_A 9 PPRIVEHPSDLIVSKGEPATLNCKAEGRPTPTIEWYKGGERVETDKDDPRSHRMLLPSGSLFFLRIVHGRKSRPDEGVYV 88 (212)
T ss_dssp EEEEEECCCCEEECTTCCEEECCEEEEESCCEEEEEETTEECCCTTTCTTCSEEECTTSCEEESSCCCCSSCCCSCEEEE
T ss_pred CcceecCCCceEEeCCCcEEEEEEcCCCCCCEEEEEECCEEeeccccccccceEEecCCcEEEEEEEecCCCcccCeEEE
Confidence 37777778888899999999999999999999999999988765411 1122223321 123445567899999999
Q ss_pred EEEEcccccceecceEEEEecc
Q psy2441 187 CVAENEVGTEYSPSTMLYVKGT 208 (212)
Q Consensus 187 C~a~n~~g~~~~~~~~l~v~~~ 208 (212)
|.+.|..|......+.|.|...
T Consensus 89 C~~~n~~g~~~~~~~~l~V~~~ 110 (212)
T 2v9r_A 89 CVARNYLGEAVSHDASLEVAIL 110 (212)
T ss_dssp EEEEETTEEEECCCEEEEECEE
T ss_pred EEEECCCCceeecceEEEEEec
Confidence 9999998876443377777654
No 342
>3grw_A Fibroblast growth factor receptor 3; FGFR3, protein-protein complex, receptor tyrosine kinas binding, immunoglobulin domain, kinase, membrane, nucleotid binding; HET: NAG; 2.10A {Homo sapiens}
Probab=99.30 E-value=2e-11 Score=85.85 Aligned_cols=85 Identities=27% Similarity=0.463 Sum_probs=67.8
Q ss_pred cceeEecCCcEEEEEeeeeCCCCceEEEeCCEEecCCCC-CceEEcCCCCceeEEEcCCCCCCCeeEEEEEEccccccee
Q psy2441 120 STKVVEISHTTVLHCSASGNPPPKISWIREMLPVDTSRN-PRYNLLTSGAPGALQITNSIEEDQGKYECVAENEVGTEYS 198 (212)
Q Consensus 120 ~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~~-~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~n~~g~~~~ 198 (212)
....+.+|+.+.|.|.+.+.|.+.+.|++++..+..... ........ ...|.|.+++.+|+|.|.|.+.|..|....
T Consensus 23 ~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~--~~~L~i~~v~~~d~G~Y~C~~~~~~~~~~~ 100 (241)
T 3grw_A 23 KLLAVPAANTVRFRCPAAGNPTPSISWLKNGREFRGEHRIGGIKLRHQ--QWSLVMESVVPSDRGNYTCVVENKFGSIRQ 100 (241)
T ss_dssp CEEEEETTSEEEEECCEECSSCCEEEEEETTEECCGGGSTTCCEEEGG--GTEEEECSCCGGGCEEEEEEEEETTEEEEE
T ss_pred cceEEcCCCeEEEEEEecCCCCceeEEEECCcccCCCCcccceeeecc--ceEEEEEeCCcccCEEEEEEEeecCCceEE
Confidence 457789999999999999999999999999988865411 11222222 268999999999999999999999888776
Q ss_pred cceEEEEec
Q psy2441 199 PSTMLYVKG 207 (212)
Q Consensus 199 ~~~~l~v~~ 207 (212)
. +.+.|..
T Consensus 101 ~-~~l~V~~ 108 (241)
T 3grw_A 101 T-YTLDVLE 108 (241)
T ss_dssp E-EEEEEEC
T ss_pred E-EEEEEec
Confidence 6 7777765
No 343
>2wv3_A Neuroplastin; igcam, membrane, glycoprotein, cell membrane, cell adhesion, transmembrane, disulfide bond, alternative splicing; HET: NAG; 1.95A {Rattus norvegicus}
Probab=99.29 E-value=2.2e-11 Score=82.59 Aligned_cols=86 Identities=16% Similarity=0.319 Sum_probs=65.8
Q ss_pred CccccCCcceeEec-CCcEEEEEeeeeCCC--CceEEEeCCEEecCCCCCceEEcCCCCceeEEEcCCCCCCCeeEEEEE
Q psy2441 113 PQITEAPSTKVVEI-SHTTVLHCSASGNPP--PKISWIREMLPVDTSRNPRYNLLTSGAPGALQITNSIEEDQGKYECVA 189 (212)
Q Consensus 113 p~~~~~~~~~~~~~-g~~~~l~C~~~~~p~--~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~a 189 (212)
|.+...+ ...+.+ |+.+.|.|.+.+.|. +.+.|++++..+... ... ..+ ..|.|.+++.+|+|.|.|.+
T Consensus 4 P~i~~~~-~~~v~~~G~~v~l~C~~~~~~~~~~~v~W~~~~~~~~~~--~~~--~~~---~~L~i~~~~~~d~G~Y~C~~ 75 (190)
T 2wv3_A 4 PRIVTSE-EVIIRDSLLPVTLQCNLTSSSHTLMYSYWTKNGVELTAT--RKN--ASN---MEYRINKPRAEDSGEYHCVY 75 (190)
T ss_dssp CEEEECC-CEECCCSSSCEEEEEEEEECSSCEEEEEEEETTEECTTC--CBC--CSE---EEEEESSCCGGGCEEEEEEE
T ss_pred Ccccccc-eEEEccCCceEEEEEEeccCCCCceEEEEEECCEECccc--ceE--ecc---EEEEEecCCcccCEEEEEEE
Confidence 5555533 344555 999999999999887 799999999988764 111 122 78999999999999999999
Q ss_pred EcccccceecceEEEEecc
Q psy2441 190 ENEVGTEYSPSTMLYVKGT 208 (212)
Q Consensus 190 ~n~~g~~~~~~~~l~v~~~ 208 (212)
.|. |..... +.|.|...
T Consensus 76 ~n~-~~~~~~-~~l~V~~~ 92 (190)
T 2wv3_A 76 HFV-SAPKAN-ATIEVKAA 92 (190)
T ss_dssp EET-TEEEEE-EEEEEECC
T ss_pred EeC-Cccccc-EEEEEecC
Confidence 998 766655 77777654
No 344
>3bp6_B Programmed cell death 1 ligand 2; PD-1, PD-L2, complex, costimulation, glycoprotein, immunoglo domain, membrane, transmembrane, receptor; 1.60A {Mus musculus} PDB: 3bp5_B 3rnq_B 3bov_A 3rnk_B
Probab=99.29 E-value=3e-11 Score=82.71 Aligned_cols=89 Identities=17% Similarity=0.246 Sum_probs=64.5
Q ss_pred CCcceeEecCCcEEEEEeeeeCCC-----CceEEEeCCEEecCCCCCceEEcCCC---CceeEEEcCCCCCCCeeEEEEE
Q psy2441 118 APSTKVVEISHTTVLHCSASGNPP-----PKISWIREMLPVDTSRNPRYNLLTSG---APGALQITNSIEEDQGKYECVA 189 (212)
Q Consensus 118 ~~~~~~~~~g~~~~l~C~~~~~p~-----~~i~W~~~~~~~~~~~~~~~~~~~~~---~~~~l~i~~~~~~d~g~y~C~a 189 (212)
.+....+.+|+.+.|.|.+.+.|. +.+.|++++...... ..++.+..+. +...|.|.+++.+|+|.|.|.+
T Consensus 8 p~~~v~v~~G~~v~L~C~~~~~p~~~~~~~~v~W~k~~~~~~~~-~~r~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~ 86 (202)
T 3bp6_B 8 PKEVYTVDVGSSVSLECDFDRRECTELEGIRASLQKVENDTSLQ-SERATLLEEQLPLGKALFHIPSVQVRDSGQYRCLV 86 (202)
T ss_dssp SCSEEEEETTSCEEEEEEECTTC---CTTEEEEEEECC--CCCB-CSSCEECGGGGGGTEEEEEECSCCGGGCEEEEEEE
T ss_pred CCcCEEEeCCCcEEEEEEecCCCCCCccceEEEEEcCCCccccc-CCceEEeeccccCCeeEEEECCCCHHHCcEEEEEE
Confidence 444567889999999999999876 789999944333222 2444443321 2378999999999999999999
Q ss_pred EcccccceecceEEEEecc
Q psy2441 190 ENEVGTEYSPSTMLYVKGT 208 (212)
Q Consensus 190 ~n~~g~~~~~~~~l~v~~~ 208 (212)
.|..|..... +.|.|...
T Consensus 87 ~~~~~~~~~~-~~l~V~~~ 104 (202)
T 3bp6_B 87 ICGAAWDYKY-LTVKVKAS 104 (202)
T ss_dssp EETTEEEEEE-EEEEEEBC
T ss_pred EeCCCcceEE-EEEEecCC
Confidence 9998877555 77777653
No 345
>3knb_A Titin; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=99.29 E-value=6.3e-12 Score=76.35 Aligned_cols=76 Identities=17% Similarity=0.319 Sum_probs=56.8
Q ss_pred CCCeEEeCCCccEEeeCCeEEEEcccCCCCCCcEEEEeCCEEecCCCCCeeEEeecCCCCeEEEeeeCCccceeEEe
Q psy2441 28 GFPQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREMLPVDTSRNPRYNLLTSGAPGTYIKIKPNLFSPLSVYS 104 (212)
Q Consensus 28 ~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~k~g~~l~~~~~~~~~~~~~~~~g~~l~i~~~~~~~~~v~~ 104 (212)
.||.|...|.+..+.+|+.+.|.|.+.|.|.|.|.|+|+|.+|......++.+... +....|.|.++...+...|.
T Consensus 4 ~PP~i~~~p~~~~v~~G~~~~l~C~~~g~P~p~v~W~k~g~~i~~~~~~~~~~~~~-~~~~~L~I~~~~~~D~G~Y~ 79 (100)
T 3knb_A 4 IPPKIEALPSDISIDEGKVLTVACAFTGEPTPEVTWSCGGRKIHSQEQGRFHIENT-DDLTTLIIMDVQKQDGGLYT 79 (100)
T ss_dssp EEEEECCCCSEEEEETTSEEEEEEEEEEESCCEEEEEETTEECCTTGGGTEEEEEC-SSEEEEEESSCCGGGCEEEE
T ss_pred CCCEEEeCCCcEEEeCCCeEEEEEEEEEecCCEEEEEECceEeeeeccceeeeecc-cceEEEEEcCCCccCCEEEE
Confidence 46888888889999999999999999999999999999999997654445665544 33344555555444444443
No 346
>3bn3_B ICAM-5, intercellular adhesion molecule 5, telencephalin; I domain, integrin, allosteric mobility, cell adhesi immune system; HET: NAG; 2.10A {Homo sapiens}
Probab=99.29 E-value=5.6e-11 Score=80.49 Aligned_cols=158 Identities=13% Similarity=0.124 Sum_probs=91.4
Q ss_pred eEEeCCCccEEeeCCeEEEEcccCCCCCCcEEEEe--CCEEecCCCC-CeeEEeecC-CCCeEEEeeeC------Cccce
Q psy2441 31 QITEAPSTKVVEISHTTVLHCSASGNPPPKISWIR--EMLPVDTSRN-PRYNLLTSG-APGTYIKIKPN------LFSPL 100 (212)
Q Consensus 31 ~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~k--~g~~l~~~~~-~~~~~~~~~-~~g~~l~i~~~------~~~~~ 100 (212)
.+.+.|....|.+|+++.|.|.+....+..+.|-- ++..+..... ..+.+.... |.+.|+|..+. ....+
T Consensus 4 ~v~v~P~~~~V~~G~Sv~l~Cs~~c~~p~~~~~~t~l~~~~~~~g~~~~~~~ls~vs~d~~~~~C~~~c~~~~~~~~v~l 83 (196)
T 3bn3_B 4 WADLQPRVAFVERGGSLWLNCSTNCPRPERGGLETSLRRNGTQRGLRWLARQLVDIREPETQPVCFFRCARRTLQARGLI 83 (196)
T ss_dssp CEEEESSEEEEETTEEEEEEEEECCSSCSEEEEECSSEEEEEEEETTEEEEEEEEECSSEECCEEEEEETTEEEEEECEE
T ss_pred EEEEcCCCcEEcCCCeEEEEEeCCCCCCCccEEEEccCCeeEccccCceEEEEEEEccCCCceEEEEECCCCceEEEEEE
Confidence 45567778889999999999999753333567632 1222222111 124444432 44447787655 44566
Q ss_pred eEEeecCCCCCCCccccCCcceeEecCCcEEEEEeeeeC-CCCc--eEEEeCCEEecCCCCCceEEcCCCCceeEEEcCC
Q psy2441 101 SVYSADKIPPGFPQITEAPSTKVVEISHTTVLHCSASGN-PPPK--ISWIREMLPVDTSRNPRYNLLTSGAPGALQITNS 177 (212)
Q Consensus 101 ~v~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~-p~~~--i~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~ 177 (212)
.|+.. |..+.+.. ....+.+|+.++|.|.+.+. |... |.|++++..+.......-.........++.+...
T Consensus 84 ~Vy~~----P~~v~i~~--~~~~~~~G~~~tL~C~v~~~~P~~~L~i~wlkg~~~l~~~~~~~~~~~~~~~t~~~~~~~~ 157 (196)
T 3bn3_B 84 RTFQR----PDRVELMP--LPPWQPVGENFTLSCRVPGAGPRASLTLTLLRGAQELIRRSFAGEPPRARGAVLTATVLAR 157 (196)
T ss_dssp EEEBC----CCCCEECC--CCSSEETTSEEEEEEEETTCBCGGGEEEEEEETTEEEEEEECTTSCTTCCCEEEEEEEECC
T ss_pred EEecC----CCcCEEcc--CCccccCCCcEEEEEEeCCccCCCCcEEEEEeCCEEeeccccccccccccceeEEEEEeee
Confidence 66653 22233332 22236789999999999774 4444 7999999887542100000000001245555544
Q ss_pred CCCCCeeEEEEEEcccc
Q psy2441 178 IEEDQGKYECVAENEVG 194 (212)
Q Consensus 178 ~~~d~g~y~C~a~n~~g 194 (212)
..++...|.|.|.|..+
T Consensus 158 r~D~g~~~sC~A~l~l~ 174 (196)
T 3bn3_B 158 REDHGANFSCRAELDLR 174 (196)
T ss_dssp GGGTTCEEEEEEEEECG
T ss_pred eccCCCeEEEEEEccCC
Confidence 44455599999999876
No 347
>3mlr_H Human monoclonal anti-HIV-1 GP120 V3 antibody 255 heavy chain; human monoclonal antibody, FAB, third variable antibody-antigen interaction; 1.80A {Homo sapiens} PDB: 3mls_H 3mlt_H 3mlu_H 3mlv_H
Probab=99.28 E-value=3.2e-11 Score=84.28 Aligned_cols=155 Identities=18% Similarity=0.283 Sum_probs=86.2
Q ss_pred CccEEeeCCeEEEEcccCCC--CCCcEEEEeCC-----EEe------------cCCCCCeeEEeec--------------
Q psy2441 37 STKVVEISHTTVLHCSASGN--PPPKISWIREM-----LPV------------DTSRNPRYNLLTS-------------- 83 (212)
Q Consensus 37 ~~~~v~~g~~v~l~C~~~~~--p~~~v~W~k~g-----~~l------------~~~~~~~~~~~~~-------------- 83 (212)
..+.+.+|+.++|.|.+.+. +...+.|||.. ..+ ......|+.+...
T Consensus 8 ~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~rq~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~ 87 (226)
T 3mlr_H 8 GGEVKQPGQSLKISCKSSGYNFLDSWIGWVRQIPGKGLEWIGIIYPDDSDAHYSPSFEGQVTMSVDKSISTAYLQWTTLQ 87 (226)
T ss_dssp CCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECTTTBTTBEEEEEGGGTEEEEEESSCC
T ss_pred CCEEEecCCCEEEEEEecCccccCCEEEEEEECCCCCcEEEEEEecCCCccccCcccCCcEEEEecCCCCEEEEEECCCC
Confidence 36789999999999999653 34579999832 111 0111244544321
Q ss_pred -CCCCeEEEeeeCCc---------------cceeEEeecCCCCCCCccccCCcceeEecCCcEEEEEeeeeC-C-CCceE
Q psy2441 84 -GAPGTYIKIKPNLF---------------SPLSVYSADKIPPGFPQITEAPSTKVVEISHTTVLHCSASGN-P-PPKIS 145 (212)
Q Consensus 84 -~~~g~~l~i~~~~~---------------~~~~v~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~-p-~~~i~ 145 (212)
+|.|.|.|...... ..+.|.. .+..+|.+...+....+.+|+.+.|.|.+.+. | .+.+.
T Consensus 88 ~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~t~l~V~~---~~~~~P~i~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~v~ 164 (226)
T 3mlr_H 88 ASDTGKYFCTRLYLFEGAQSSNAFDLWGQGTMILVSS---GTTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVS 164 (226)
T ss_dssp GGGCEEEEEEEEEEEESSSEEEEEEEECCCEEEEECC---CCCBCCEEEEEEEEECSTTSSEEEEEEEEEEEBSSCCEEE
T ss_pred cccCEEEEEeEccCCCcccccchhhhhCCccEEeecc---CCCCCCcEEEecCcccccCCCCEEEEEEEEEEECCCeEEE
Confidence 36777777653311 1122211 11222444322222234578999999999874 4 35789
Q ss_pred EEeCCEEecCC-CCCceEEcCCCC---ceeEEEcCCCCCCCeeEEEEEEcccccce
Q psy2441 146 WIREMLPVDTS-RNPRYNLLTSGA---PGALQITNSIEEDQGKYECVAENEVGTEY 197 (212)
Q Consensus 146 W~~~~~~~~~~-~~~~~~~~~~~~---~~~l~i~~~~~~d~g~y~C~a~n~~g~~~ 197 (212)
| ++..+... .........++. .+.|.|.+...+| |.|+|.+.|..+...
T Consensus 165 W--~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-~~ytC~v~h~~~~~~ 217 (226)
T 3mlr_H 165 W--NSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTK 217 (226)
T ss_dssp E--GGGTCCTTEEECCCEECTTSCEEEEEEEEEEGGGTTT-CCCEEEEEEGGGTEE
T ss_pred E--CCccccCCeEeCCcEECCCCCEEEEEEEEECHhHcCC-CeEEEEEEECCCCcC
Confidence 9 33222111 000000111111 2578898888888 999999999876654
No 348
>3knb_B Obscurin-like protein 1; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 2wp3_O* 2wwm_C 2wwk_O
Probab=99.28 E-value=1.1e-11 Score=76.26 Aligned_cols=74 Identities=20% Similarity=0.328 Sum_probs=55.7
Q ss_pred CCCCeEEeCCCccEEeeCCeEEEEcccCCCCCCcEEEEeCCEEecCCCCCeeEEeecCCCCeEEEeeeCCccceeEE
Q psy2441 27 PGFPQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREMLPVDTSRNPRYNLLTSGAPGTYIKIKPNLFSPLSVY 103 (212)
Q Consensus 27 ~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~k~g~~l~~~~~~~~~~~~~~~~g~~l~i~~~~~~~~~v~ 103 (212)
..||.|...+.++.+.+|+.+.|.|.+.|.|.+.|.|+|+|..|... .++.+... +....|.|.++...+...|
T Consensus 11 ~~pP~f~~~p~~~~v~~G~~~~l~C~~~G~P~p~v~W~k~g~~l~~~--~~~~~~~~-~~~~~L~I~~v~~~D~G~Y 84 (107)
T 3knb_B 11 GSPPCFLRFPRPVRVVSGAEAELKCVVLGEPPPVVVWEKGGQQLAAS--ERLSFPAD-GAEHGLLLTAALPTDAGVY 84 (107)
T ss_dssp CEEEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCC--SSEECCEE-TTEEEEEESSCCGGGCEEE
T ss_pred CCCCEEEeCCCcEEEeCCCcEEEEEEEEEecCCEEEEEECcccccce--eeEEEeec-CceEEEEEecCChhhCEEE
Confidence 35789999999999999999999999999999999999999999876 56655443 2333455554444333333
No 349
>1pko_A Myelin oligodendrocyte glycoprotein; IGV-domain, immune system; 1.45A {Rattus norvegicus} SCOP: b.1.1.1 PDB: 1pkq_E 3csp_A 1py9_A
Probab=99.27 E-value=9.9e-11 Score=75.42 Aligned_cols=91 Identities=22% Similarity=0.282 Sum_probs=63.4
Q ss_pred CCcceeEecCCcEEEEEeeeeCCC---CceEEEeCCEE--ec-------------CCCCCceEEcCC---CCceeEEEcC
Q psy2441 118 APSTKVVEISHTTVLHCSASGNPP---PKISWIREMLP--VD-------------TSRNPRYNLLTS---GAPGALQITN 176 (212)
Q Consensus 118 ~~~~~~~~~g~~~~l~C~~~~~p~---~~i~W~~~~~~--~~-------------~~~~~~~~~~~~---~~~~~l~i~~ 176 (212)
.+....+..|+++.|.|.+.+.+. +.+.|++++.. +. .....++.+..+ .+..+|.|.+
T Consensus 12 ~~~~v~~~~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~v~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~ 91 (139)
T 1pko_A 12 PGHPIRALVGDEAELPCRISPGKNATGMEVGWYRSPFSRVVHLYRNGKDQDAEQAPEYRGRTELLKESIGEGKVALRIQN 91 (139)
T ss_dssp CSSCEEEETTSCEEEEEEEESCCCCTTSEEEEEEC--CCEEEEEETTEECGGGSCSTTTTSEEEECTTGGGTEEEEEESS
T ss_pred CCCCEEEEeCCCEEEeeEccCCCCCCceEEEEEECCCCceEEEEeCCcccccccCcccCCceEEccccccCCeEEEEEcc
Confidence 344567889999999999976543 68999997631 10 001245544432 1236899999
Q ss_pred CCCCCCeeEEEEEEcccccceecceEEEEecce
Q psy2441 177 SIEEDQGKYECVAENEVGTEYSPSTMLYVKGTQ 209 (212)
Q Consensus 177 ~~~~d~g~y~C~a~n~~g~~~~~~~~l~v~~~~ 209 (212)
++.+|+|.|.|.+.|..|..... +.|.|.++.
T Consensus 92 v~~~D~G~Y~C~v~~~~~~~~~~-~~L~V~~P~ 123 (139)
T 1pko_A 92 VRFSDEGGYTCFFRDHSYQEEAA-VELKVEDPF 123 (139)
T ss_dssp CCGGGCEEEEEEEEETTEEEEEE-EEEEEECTT
T ss_pred CCHHHCEEEEEEEEcCCCceEEE-EEEEEecCc
Confidence 99999999999999988866555 777777543
No 350
>3khq_A B-cell antigen receptor complex-associated protei chain; CD79B, CD79A, IG-beta, BCR, IG domain, V-SET, immunoglobulin protein binding; HET: FLC GSH; 1.70A {Mus musculus} PDB: 3kho_A*
Probab=99.27 E-value=3.8e-11 Score=76.76 Aligned_cols=94 Identities=26% Similarity=0.319 Sum_probs=63.9
Q ss_pred ccccCCcceeEecCCcEEEEEeeeeCCCCceEEEeCC--EEec--CCCCCceEEcCCCCceeEEEcCCCCCCCeeEEEEE
Q psy2441 114 QITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREM--LPVD--TSRNPRYNLLTSGAPGALQITNSIEEDQGKYECVA 189 (212)
Q Consensus 114 ~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~--~~~~--~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~a 189 (212)
.+...+....+.+|+.+.|.|.+.+. +.+.|+++. .... .....++....++....|.|.++..+|+|.|.|.+
T Consensus 19 ~v~q~p~~~~v~~G~~v~L~C~~~~~--~~v~W~r~~~g~~~~~l~~~~~r~~~~~~~~~~~L~I~~~~~~DsG~Y~C~a 96 (133)
T 3khq_A 19 QIWQHPRFAAKKRSSMVKFHCYTNHS--GALTWFRKRGSQQPQELVSEEGRIVQTQNGSVYTLTIQNIQYEDNGIYFCKQ 96 (133)
T ss_dssp SEEEECSEEEECTTCCEEEEEEESSS--SCEEEEEECTTSCCEECCCTTTTEEEEEETTEEEEEECSCCGGGCEEEEEEE
T ss_pred ceEEcCceEEEeCCCeEEEEEEeCCC--CEEEEEEeCCCCCCEEEEEeCCCEEEEcCCCEEEEEECCCChHHCEEEEEEE
Confidence 34445667788999999999999877 899999862 2211 11235665554444568999999999999999999
Q ss_pred Ecccccc---eecceEEEEecce
Q psy2441 190 ENEVGTE---YSPSTMLYVKGTQ 209 (212)
Q Consensus 190 ~n~~g~~---~~~~~~l~v~~~~ 209 (212)
.|..|.. ......|.|.+.+
T Consensus 97 ~n~~g~~~~~~g~gt~L~V~~~p 119 (133)
T 3khq_A 97 KCDSANHNVTDSCGTELLVLGFS 119 (133)
T ss_dssp SSCC-------CCCEEEEEC---
T ss_pred EeCCCCcceeECCCEEEEEEecc
Confidence 9986521 1222777777643
No 351
>1vca_A VCAM-D1,2, human vascular cell adhesion molecule-1; immunoglobulin superfamily, integrin-binding, cell adhesion protein; 1.80A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ij9_A 1vsc_A
Probab=99.27 E-value=2.9e-11 Score=83.04 Aligned_cols=80 Identities=18% Similarity=0.292 Sum_probs=59.7
Q ss_pred eeEecCCcEEEEEeeeeCCCCceEEEeCC-EEecCCCCCceEEcCCCCceeEEEcCCCCCCCeeEEEEEEcccccceecc
Q psy2441 122 KVVEISHTTVLHCSASGNPPPKISWIREM-LPVDTSRNPRYNLLTSGAPGALQITNSIEEDQGKYECVAENEVGTEYSPS 200 (212)
Q Consensus 122 ~~~~~g~~~~l~C~~~~~p~~~i~W~~~~-~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~n~~g~~~~~~ 200 (212)
..+.+|+.+.|.|.+.|.|.|.+.|+++. .++. .+...... ...|.|.+++.+|.|.|.|.|.|..|.....
T Consensus 11 ~~~~~G~~v~L~C~~~g~P~p~i~W~~~~~~~~~----~~~~~~~~--~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~- 83 (202)
T 1vca_A 11 YLAQIGDSVSLTCSTTGCESPFFSWRTQIDSPLN----GKVTNEGT--TSTLTMNPVSFGNEHSYLCTATCESRKLEKG- 83 (202)
T ss_dssp EEEETTSCEEEEEEEESCSSCEEEEEETTCCCCS----SEEEEETT--EEEEEESSCCGGGCSEEEEEEEETTEEEEEE-
T ss_pred EEEcCCCcEEEEEeecCCCCCeEEEECCCCCCcc----ceEEEcCC--ccEEEECcCCHHHCEEEEEEEEECCceEeeE-
Confidence 34558999999999999999999999842 2111 12211111 2679999999999999999999998876655
Q ss_pred eEEEEecc
Q psy2441 201 TMLYVKGT 208 (212)
Q Consensus 201 ~~l~v~~~ 208 (212)
+.|.|...
T Consensus 84 ~~l~V~~~ 91 (202)
T 1vca_A 84 IQVEIYSF 91 (202)
T ss_dssp EEEEEEBC
T ss_pred EEEEEEeC
Confidence 77777654
No 352
>3d9a_L Light chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_L 1xgp_A 1xgq_A 1xgr_A 1xgt_A 1dqq_A 1dqm_L 1dqj_A 1nby_A 1nbz_A 1ndg_A 1ndm_A 1xgu_A 1fh5_L 1bm3_L 1opg_L 1mlb_A 1mlc_A 1rih_L 1p2c_A ...
Probab=99.26 E-value=3.7e-11 Score=82.92 Aligned_cols=91 Identities=24% Similarity=0.315 Sum_probs=65.9
Q ss_pred cCCcceeEecCCcEEEEEeeeeCCCCceEEEeCC--EEe----------cCCCCCceEEcCCCCceeEEEcCCCCCCCee
Q psy2441 117 EAPSTKVVEISHTTVLHCSASGNPPPKISWIREM--LPV----------DTSRNPRYNLLTSGAPGALQITNSIEEDQGK 184 (212)
Q Consensus 117 ~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~--~~~----------~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~ 184 (212)
..+....+.+|+.+.|.|.+.+.|.+.+.|++++ ... ......++....++....|.|.++..+|+|.
T Consensus 6 ~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~ 85 (213)
T 3d9a_L 6 QSPATLSVTPGNSVSLSCRASQSIGNNLHWYQQKSHESPRLLIKYASQSISGIPSRFSGSGSGTDFTLSINSVETEDFGM 85 (213)
T ss_dssp EECSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGGGCEE
T ss_pred eCCccEEEeCCCcEEEEEECCCCCCCCEEEEEeCCCCCcEEEEEEcccccccccccEEEEcCCCEEEEEECCCChhhCEE
Confidence 3455677889999999999999998999999843 111 1111245554443334699999999999999
Q ss_pred EEEEEEcccccceecceEEEEec
Q psy2441 185 YECVAENEVGTEYSPSTMLYVKG 207 (212)
Q Consensus 185 y~C~a~n~~g~~~~~~~~l~v~~ 207 (212)
|.|.+.|..+........|.|..
T Consensus 86 Y~C~~~~~~~~~~~~~~~l~V~~ 108 (213)
T 3d9a_L 86 YFCQQSNSWPYTFGGGTKLEIKR 108 (213)
T ss_dssp EEEEECSSSSCEECCCEEEEECC
T ss_pred EEEeeecCCcceeCCCEEEEEec
Confidence 99999998776544435677765
No 353
>3iu4_H CHP3 FAB heavy chain; antibody, ganglioside, idiotype, immune system; 1.75A {Mus musculus} PDB: 1ibg_H* 3iy6_B
Probab=99.26 E-value=1.7e-11 Score=87.67 Aligned_cols=155 Identities=15% Similarity=0.242 Sum_probs=83.8
Q ss_pred CccEEeeCCeEEEEcccCCCC--CCcEEEEeCC-----EEe---c--------CCCCCeeEEeec---------------
Q psy2441 37 STKVVEISHTTVLHCSASGNP--PPKISWIREM-----LPV---D--------TSRNPRYNLLTS--------------- 83 (212)
Q Consensus 37 ~~~~v~~g~~v~l~C~~~~~p--~~~v~W~k~g-----~~l---~--------~~~~~~~~~~~~--------------- 83 (212)
..+.+.+|++++|.|.+.+.. ...+.|||.. ..+ . .....|+.+...
T Consensus 8 ~~v~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~ 87 (263)
T 3iu4_H 8 GPGLVAPSQSLSITCTVSGFSLSRYSVHWVRQPPGKGLEWLGMIWGGGSTDYNSALKSRLSISKDNSKSQVFLKMNSLQT 87 (263)
T ss_dssp CCSEECTTSCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEECTTSCEEECGGGTTCEEEEEEGGGTEEEEEECSCCG
T ss_pred CCEEEcCCCCEEEEEEeccccCCceEEEEEEECCCCCcEEEEEEeCCCcEeeCcccCCCEEEEecCCCCEEEEEECCCCH
Confidence 367899999999999996533 4579999832 111 0 001245554321
Q ss_pred CCCCeEEEeeeCCc--------------cceeEEeecCCCCCCCccccCCcceeEecCCcEEEEEeeeeC-CC-CceEEE
Q psy2441 84 GAPGTYIKIKPNLF--------------SPLSVYSADKIPPGFPQITEAPSTKVVEISHTTVLHCSASGN-PP-PKISWI 147 (212)
Q Consensus 84 ~~~g~~l~i~~~~~--------------~~~~v~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~-p~-~~i~W~ 147 (212)
.|.|.|.|...... ..+.|.. ....+|.+........+..|+.+.|.|.+.+. |. +.+.|
T Consensus 88 ~DsG~Y~C~~~~~~~~~~~~~~~~~~~~t~l~V~~---~~~~~P~v~~~~~~~~~~~g~~~~L~C~~~~~~P~~~~v~W- 163 (263)
T 3iu4_H 88 DDTAMYYCARSGVREGRAQAWFAYWGQGTLVTVSA---ASTKGPSVFPLAPSSKGSTSGTAALGCLVKDYFPEPVTVSW- 163 (263)
T ss_dssp GGCEEEEEEEEECC---CEEEEEEECCCEEEEECS---SCCBCCEEEEECCCCCC----EEEEEEEEEEEBSSCCEEEE-
T ss_pred HHCEEEEEEEEeCCCCccccccceeCCceEEEEec---ccCCCCEEEEccCccccccCCcEEEEEEEEeEeCCceEEEE-
Confidence 36777777654321 1222211 11223444422222224478999999999874 42 58999
Q ss_pred eCCEEecCC-CCCceEEcCCCC---ceeEEEcCCCCCCCeeEEEEEEcccccce
Q psy2441 148 REMLPVDTS-RNPRYNLLTSGA---PGALQITNSIEEDQGKYECVAENEVGTEY 197 (212)
Q Consensus 148 ~~~~~~~~~-~~~~~~~~~~~~---~~~l~i~~~~~~d~g~y~C~a~n~~g~~~ 197 (212)
++..+... .........++. .+.|.|.....+| |.|+|.+.|..+...
T Consensus 164 -~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-~~ytC~v~h~~~~~~ 215 (263)
T 3iu4_H 164 -NSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTK 215 (263)
T ss_dssp -GGGTBCTTEEECCCEECTTSCEEEEEEEEEETTHHHH-CCCEEEEEEGGGTEE
T ss_pred -CCcccCCceeecCceECCCCCEEEEEEEEECHhHcCC-CEEEEEEEECCCCcc
Confidence 33322211 000000111111 2478888888888 999999999876543
No 354
>2q20_A VK1 O18/O8 germline light chain variable domain; Al, light chain amyloidosis, amyloid, immunoglobulin, protein fibril; 1.30A {Homo sapiens} PDB: 2kqm_A 3cdf_A 3cdc_A 2kqn_A 3cdy_A 2q1e_A 3dvi_A 1igm_L 1bww_A 1b0w_A 1bre_A 1qp1_A 3dvf_A 1rei_A 1wtl_A 1ar2_A 1fgv_L 2bx5_A 2uzi_L* 1bvk_A ...
Probab=99.26 E-value=1e-10 Score=72.11 Aligned_cols=79 Identities=22% Similarity=0.366 Sum_probs=57.5
Q ss_pred ccccCCcceeEecCCcEEEEEeeeeCCCCceEEEeCC--EE---ec-------CCCCCceEEcCCCCceeEEEcCCCCCC
Q psy2441 114 QITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREM--LP---VD-------TSRNPRYNLLTSGAPGALQITNSIEED 181 (212)
Q Consensus 114 ~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~--~~---~~-------~~~~~~~~~~~~~~~~~l~i~~~~~~d 181 (212)
.+...+....+.+|+++.|.|.+.+.+.+.+.|+++. .. +- .....++....+.....|.|.++..+|
T Consensus 5 ~v~q~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~L~I~~v~~~D 84 (109)
T 2q20_A 5 QMTQSPSSLSASVGDRVTITCQASQDISNYLNWYQQKPGKAPKLLIYDASNLETGVPSRFSGSGSGTDFTFTISSLQPED 84 (109)
T ss_dssp CEEEECSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGG
T ss_pred cEEeeCCEEEecCCCcEEEEEeeccCCCCcEEEEEECCCCCCEEEEEEcCccCCCCCCcEEEeccCCEEEEEECCCChhh
Confidence 3444566678899999999999988878899999853 11 10 011345554433334689999999999
Q ss_pred CeeEEEEEEcc
Q psy2441 182 QGKYECVAENE 192 (212)
Q Consensus 182 ~g~y~C~a~n~ 192 (212)
+|.|.|.+.|.
T Consensus 85 sG~Y~C~~~~~ 95 (109)
T 2q20_A 85 IATYYCQQYDN 95 (109)
T ss_dssp CEEEEEEECSS
T ss_pred CEEEEEEEeeC
Confidence 99999999875
No 355
>2cqv_A MLCK, myosin light chain kinase, smooth muscle and non- muscle isozymes; IG fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.26 E-value=6.6e-11 Score=73.55 Aligned_cols=67 Identities=21% Similarity=0.333 Sum_probs=53.5
Q ss_pred CCCCeEEeCCCccEEeeCCeEEEEcccCCCCCCcEEEEeCCEEecCCCCCeeEEeec-------------CCCCeEEEee
Q psy2441 27 PGFPQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREMLPVDTSRNPRYNLLTS-------------GAPGTYIKIK 93 (212)
Q Consensus 27 ~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~k~g~~l~~~~~~~~~~~~~-------------~~~g~~l~i~ 93 (212)
..+|.|...+....+.+|+.+.|.|.+.+.|.+.+.|+|+|..+... .++.+... .|.|.|.|..
T Consensus 5 ~~pp~i~~~~~~~~v~~G~~v~l~C~~~g~p~p~i~W~k~~~~~~~~--~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a 82 (114)
T 2cqv_A 5 SSGPQIIQFPEDQKVRAGESVELFGKVTGTQPITCTWMKFRKQIQES--EHMKVENSENGSKLTILAARQEHCGCYTLLV 82 (114)
T ss_dssp CCCCEESCCCCSEEEETTCCEEEEEEEESSSSCEEEEEESSSBCCCS--SSEEEEECSSEEEEEETTCCTTTCEEEEEEE
T ss_pred CCCCEEEeCCCCeEEeCCCeEEEEEEEEcCCCCEEEEEECCEECcCC--CCEEEEEcCCEEEEEECCCChhcCEEEEEEE
Confidence 36788888888999999999999999999999999999999888764 44444321 3677777766
Q ss_pred eC
Q psy2441 94 PN 95 (212)
Q Consensus 94 ~~ 95 (212)
.+
T Consensus 83 ~N 84 (114)
T 2cqv_A 83 EN 84 (114)
T ss_dssp EC
T ss_pred EE
Confidence 65
No 356
>2d3v_A Leukocyte immunoglobulin-like receptor subfamily A member 5 isoform 1; immunoglobulin-like fold, immune system; 1.85A {Homo sapiens}
Probab=99.26 E-value=1.4e-11 Score=84.14 Aligned_cols=90 Identities=18% Similarity=0.301 Sum_probs=65.1
Q ss_pred CccccCCcceeEecCCcEEEEEeeeeCCCCceEEEeCCEEecCCCCCceEEcCCCCceeEEEcCCCCCCCeeEEEEEEcc
Q psy2441 113 PQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREMLPVDTSRNPRYNLLTSGAPGALQITNSIEEDQGKYECVAENE 192 (212)
Q Consensus 113 p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~n~ 192 (212)
|.+...+.. .+.+|+.+.|.|.+.+.|. .+.|++++..+... ... .........|.|.+++.+|+|.|.|.|.|.
T Consensus 6 P~i~~~p~~-~v~~G~~v~L~C~~~~~~~-~~~W~k~g~~~~~~--~~~-~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~ 80 (196)
T 2d3v_A 6 ATLWAEPGS-VISRGNSVTIRCQGTLEAQ-EYRLVKEGSPEPWD--TQN-PLEPKNKARFSIPSMTEHHAGRYRCYYYSP 80 (196)
T ss_dssp CEEEEESCS-EEETTCCEEEEEECCTTCC-EEEEEETTCSSCSE--EEC-CCSSTTEEEEEESSCCGGGCEEEEEEEEET
T ss_pred CEEEeCCCC-cccCCCeEEEEEeCCCCCc-EEEEEECCCCCCcc--ccc-ccCCccccEEEeccCChhHCeEEEEEEeCC
Confidence 666666654 6889999999999988766 99999998766432 000 001112378999999999999999999998
Q ss_pred cccce-ecceEEEEec
Q psy2441 193 VGTEY-SPSTMLYVKG 207 (212)
Q Consensus 193 ~g~~~-~~~~~l~v~~ 207 (212)
.|... +..+.|.|..
T Consensus 81 ~g~~~~s~~~~l~V~~ 96 (196)
T 2d3v_A 81 AGWSEPSDPLELVVTG 96 (196)
T ss_dssp TEECBCCCCEEEEEEC
T ss_pred CCcCCcCccEEEEecC
Confidence 76432 2336777765
No 357
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.26 E-value=2.6e-11 Score=90.65 Aligned_cols=83 Identities=22% Similarity=0.238 Sum_probs=67.0
Q ss_pred CcceeEecCCcEEEEEeeeeCCCCceEEEeCCEEecCC--CCCceEEcCCCCceeEEEcCCCCCCCeeEEEEEEcccccc
Q psy2441 119 PSTKVVEISHTTVLHCSASGNPPPKISWIREMLPVDTS--RNPRYNLLTSGAPGALQITNSIEEDQGKYECVAENEVGTE 196 (212)
Q Consensus 119 ~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~--~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~n~~g~~ 196 (212)
+....+.+|+.+.|.|.+.+ |.|.+.|++++..+... ...++.. .+ ++|.|.+++.+|+|.|+|.|.|..|..
T Consensus 253 ~~~v~v~~G~~~~l~C~~~g-p~p~i~W~~~~~~~~~~~~~~~r~~~-~~---~~L~I~~v~~~D~G~Y~C~a~N~~g~~ 327 (361)
T 2xot_A 253 ESAWEAHLGDTLTIRCDTKQ-QGMTKVWVSPSNEQVLSQGSNGSVSV-RN---GDLFFKKVQVEDGGVYTCYAMGETFNE 327 (361)
T ss_dssp CCCCEEETTCCEEECCCCSS-TTCEEEEECTTSCBCCSCCSSSSEEE-ET---TEEEESSCCTTSCEEEEEEEECSSCEE
T ss_pred ccCceecCCCeEEEEeEeeC-CCCeEEEEeCCCeeEeecccCCceEe-ec---CeEEEeecCcccCEEEEEEEecCCCcc
Confidence 34567899999999999999 99999999977654332 2235655 44 689999999999999999999999988
Q ss_pred eecceEEEEec
Q psy2441 197 YSPSTMLYVKG 207 (212)
Q Consensus 197 ~~~~~~l~v~~ 207 (212)
... +.+.|..
T Consensus 328 ~~~-~~l~V~~ 337 (361)
T 2xot_A 328 TLS-VELKVYN 337 (361)
T ss_dssp EEE-EEEEEES
T ss_pred EEE-EEEEEEe
Confidence 777 7777754
No 358
>1f97_A Junction adhesion molecule; immunoglobulin superfamily, beta-sandwich fold, cell adhesion; 2.50A {Mus musculus} SCOP: b.1.1.1 b.1.1.4
Probab=99.25 E-value=2.7e-11 Score=83.33 Aligned_cols=90 Identities=20% Similarity=0.330 Sum_probs=65.6
Q ss_pred ccccCCcceeEecCCcEEEEEeeeeCCCCceEEEeCCEEec----------CCCCCceEEcCCCCceeEEEcCCCCCCCe
Q psy2441 114 QITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREMLPVD----------TSRNPRYNLLTSGAPGALQITNSIEEDQG 183 (212)
Q Consensus 114 ~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~----------~~~~~~~~~~~~~~~~~l~i~~~~~~d~g 183 (212)
.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+. .....++.... ..|.|.++..+|+|
T Consensus 3 ~v~~~~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~r~~~~~----~~L~i~~v~~~D~G 78 (212)
T 1f97_A 3 SVYTAQSDVQVPENESIKLTCTYSGFSSPRVEWKFVQGSTTALVCYNSQITAPYADRVTFSS----SGITFSSVTRKDNG 78 (212)
T ss_dssp EEECSCSEEEEETTCCEEEECEEESCSSEEEEEEEEETTEEEEEEETTEECGGGTTTEEEET----TEEEESCCCGGGCE
T ss_pred eEEecCCCeEEEcCCCEEEEeEeCCCCCcEEEEEECCCceeeEEecCCcccccccCcEEeec----eeEEEcccCcccCe
Confidence 44556667788999999999999999999999999765421 11123443332 68999999999999
Q ss_pred eEEEEEEcccccc--eecceEEEEecc
Q psy2441 184 KYECVAENEVGTE--YSPSTMLYVKGT 208 (212)
Q Consensus 184 ~y~C~a~n~~g~~--~~~~~~l~v~~~ 208 (212)
.|.|.+.|..|.. ... +.|.|..+
T Consensus 79 ~Y~C~~~~~~g~~~~~~~-~~l~V~~~ 104 (212)
T 1f97_A 79 EYTCMVSEEGGQNYGEVS-IHLTVLVP 104 (212)
T ss_dssp EEEEEEEETTSSSEEEEE-EEEEEEBC
T ss_pred EEEEEEEccCCCcccEEE-EEEEEEcC
Confidence 9999999987732 333 55555443
No 359
>2vsd_A CHIR AB1; immune system receptor, FC receptor; HET: NAG NDG MAN; 1.82A {Gallus gallus}
Probab=99.25 E-value=1e-11 Score=76.16 Aligned_cols=88 Identities=16% Similarity=0.155 Sum_probs=61.6
Q ss_pred CccccCCcceeEecCCcEEEEEeeeeCCCCceEEEeCCEEecCCCCCceEEcCCCCceeEEEcCCCCCCCeeEEEEEEcc
Q psy2441 113 PQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREMLPVDTSRNPRYNLLTSGAPGALQITNSIEEDQGKYECVAENE 192 (212)
Q Consensus 113 p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~n~ 192 (212)
|.+...+.. .+.+|+.++|.|.+.+.+ ..+.|++++..+... +. ........|.|.+++.+|+|.|.|.+.|.
T Consensus 6 P~i~~~p~~-~v~~G~~VtL~C~~~~~~-~~~~w~k~g~~~~~~---~~--~~~~~~~~l~I~~v~~~dsG~Y~C~~~n~ 78 (105)
T 2vsd_A 6 PSLSLHPSQ-GVSLGDTVTLRCHLPRMA-AWVQLWLNGTLRFDK---EK--DKEQDAAEFSFAVTNLEDAGTYQCRYQVS 78 (105)
T ss_dssp CEEEEESCS-SCCTTCEEEEEEECCSSC-EEEEEEETTEEEEEE---EE--CTTCSEEEEEEECCSGGGCEEEEEEEEEE
T ss_pred CEEEeCCCC-CcCcCCCEEEEEEcCCCC-cEEEEEECCccceee---ec--cCCCCEEEEEECCCCHHHCeEEEEEEEcC
Confidence 566655555 578899999999997653 578899998765421 11 11222378999999999999999999986
Q ss_pred c---ccceecceEEEEec
Q psy2441 193 V---GTEYSPSTMLYVKG 207 (212)
Q Consensus 193 ~---g~~~~~~~~l~v~~ 207 (212)
. .+..++.+.|.|..
T Consensus 79 ~~~~~s~~Sdpl~L~V~~ 96 (105)
T 2vsd_A 79 EPLWTSNQSDPVELVLTI 96 (105)
T ss_dssp TTEEECCCCCCEEECCC-
T ss_pred CCCcccCCCCCEEEEEEE
Confidence 4 34444446666543
No 360
>1eaj_A Coxsackie virus and adenovirus receptor; virus/viral protein receptor, immunoglobulin V domain fold, symmetric dimer; 1.35A {Homo sapiens} SCOP: b.1.1.1 PDB: 1f5w_A 2j12_B 2j1k_A 2wbw_B* 2w9l_A* 1rsf_A 1jew_R 1kac_B 1p69_B 1p6a_B
Probab=99.24 E-value=8.3e-11 Score=74.14 Aligned_cols=91 Identities=19% Similarity=0.268 Sum_probs=63.9
Q ss_pred ccCCcceeEecCCcEEEEEeeeeCCCC----ceEEEeCC-------EEec------------CCCCCceEEcCC---CCc
Q psy2441 116 TEAPSTKVVEISHTTVLHCSASGNPPP----KISWIREM-------LPVD------------TSRNPRYNLLTS---GAP 169 (212)
Q Consensus 116 ~~~~~~~~~~~g~~~~l~C~~~~~p~~----~i~W~~~~-------~~~~------------~~~~~~~~~~~~---~~~ 169 (212)
...+....+.+|+.+.|.|.+.+.+.+ .+.|++++ ..+. .....++....+ ...
T Consensus 9 ~~~~~~v~~~~G~~v~L~C~~~~~~~~~~~~~v~W~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ 88 (126)
T 1eaj_A 9 TTPEEMIEKAKGETAYLPCKFTLSPEDQGPLDIEWLISPADNQKVDQVIILYSGDKIYDDYYPDLKGRVHFTSNDLKSGD 88 (126)
T ss_dssp SSSEEEEEEETTSCEEECCBEECCTTCCSCEEEEEEEEETTSSCCSEEEEEEETTEEECTTSSTTTTTEEECCSCGGGTB
T ss_pred ECCCceEEEEeCCCEEEEEEEecCCCCCCceEEEEEEeCCCcCCCceEEEEEeCCeeccccCccccCeeEEEcccccCCe
Confidence 334455778999999999999876643 49999864 2210 111234444332 123
Q ss_pred eeEEEcCCCCCCCeeEEEEEEcccccceecceEEEEec
Q psy2441 170 GALQITNSIEEDQGKYECVAENEVGTEYSPSTMLYVKG 207 (212)
Q Consensus 170 ~~l~i~~~~~~d~g~y~C~a~n~~g~~~~~~~~l~v~~ 207 (212)
.+|.|.+++.+|+|.|.|.+.|..|..... +.|.|.+
T Consensus 89 ~sL~I~~v~~~D~G~Y~C~v~~~~~~~~~~-~~L~V~~ 125 (126)
T 1eaj_A 89 ASINVTNLQLSDIGTYQCKVKKAPGVANKK-IHLVVLV 125 (126)
T ss_dssp CCEEECSCCGGGCEEEEEEEEETTEEEEEE-EEEEEEC
T ss_pred EEEEECcCChHHCeEEEEEEEcCCccCCcE-EEEEEEc
Confidence 679999999999999999999988876655 7777764
No 361
>3q0h_A T cell immunoreceptor with IG and ITIM domains; immune receptor, adhesion, structural genomics, NEW YORK STR genomics research consortium, nysgrc; 1.70A {Homo sapiens} PDB: 3rq3_A 3udw_A* 3ucr_A
Probab=99.24 E-value=6.6e-11 Score=73.96 Aligned_cols=89 Identities=19% Similarity=0.254 Sum_probs=63.4
Q ss_pred CcceeEecCCcEEEEEeeeeC--CCCceEEEeCCEEecC-----------CCCCceEEcCCCCceeEEEcCCCCCCCeeE
Q psy2441 119 PSTKVVEISHTTVLHCSASGN--PPPKISWIREMLPVDT-----------SRNPRYNLLTSGAPGALQITNSIEEDQGKY 185 (212)
Q Consensus 119 ~~~~~~~~g~~~~l~C~~~~~--p~~~i~W~~~~~~~~~-----------~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y 185 (212)
+....+..|+++.|.|...+. +...+.|++++..+.. ....|+.+..+ .+|.|.+++.+|+|.|
T Consensus 10 ~~~v~~~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~i~~~~~~~~~~~~~~~~~R~~~~~~---~sL~I~~v~~~D~G~Y 86 (117)
T 3q0h_A 10 TGNISAEKGGSIILQCHLSSTTAQVTQVNWEQQDQLLAICNADLGWHISPSFKDRVAPGPG---LGLTLQSLTVNDTGEY 86 (117)
T ss_dssp SCCEEEETTCCEEECEEEESCCCEEEEEEEEETTEEEEEEETTTEEECCGGGTTTEEECST---TCEEECSCCGGGCEEE
T ss_pred cCCEEEecCCCEEEEEEecCCCCCEEEEEEEeCCEEEEEEECCCCceeCccccCcEEeCCc---eEEEEeeCChhhCEEE
Confidence 444678889999999999763 2347899998654321 01345554333 6899999999999999
Q ss_pred EEEEEc-ccccceecceEEEEecceec
Q psy2441 186 ECVAEN-EVGTEYSPSTMLYVKGTQVD 211 (212)
Q Consensus 186 ~C~a~n-~~g~~~~~~~~l~v~~~~~p 211 (212)
.|.+.+ ..|..... +.|.|.+++.|
T Consensus 87 ~C~v~~~~~g~~~~~-~~L~V~~pp~~ 112 (117)
T 3q0h_A 87 FCIYHTYPDGTYTGR-IFLEVLESSVA 112 (117)
T ss_dssp EEEEEEETTCCEEEE-EEEEEECC---
T ss_pred EEEEEECCCCCeEEE-EEEEEEccCcc
Confidence 999764 55776666 88999888765
No 362
>1lk3_L 9D7 light chain; antigen-antibody complex, immune system; 1.91A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 1fn4_A 1c5d_L 1bfo_A 3b9k_L*
Probab=99.24 E-value=5.7e-11 Score=81.86 Aligned_cols=89 Identities=19% Similarity=0.280 Sum_probs=64.6
Q ss_pred CcceeEecCCcEEEEEeeeeCCCCceEEEeCC--EEe----------cCCCCCceEEcCCCCceeEEEcCCCCCCCeeEE
Q psy2441 119 PSTKVVEISHTTVLHCSASGNPPPKISWIREM--LPV----------DTSRNPRYNLLTSGAPGALQITNSIEEDQGKYE 186 (212)
Q Consensus 119 ~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~--~~~----------~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~ 186 (212)
+....+.+|+.+.|.|.+.+.|.+.+.|+++. ..+ ......++.....+....|.|.++..+|+|.|.
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~v~W~~~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~ 86 (210)
T 1lk3_L 7 PPALTVSPGEKLTISCKASESVTSRMHWYQQKPGQQPKLLIYKASNLASGVPARFSGSGSGTDFTLTIDPVEADDTAIYF 86 (210)
T ss_dssp CSEEEECTTSCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEE
T ss_pred CCcEEEcCCCCEEEEeeCCCccCCCEEEEEECCCCCeEEEEEccccccCCccccEEEEecCCEEEEEECCCCHHHCeEEE
Confidence 56677899999999999999988899999842 211 111124554443333469999999999999999
Q ss_pred EEEEcccccceecceEEEEec
Q psy2441 187 CVAENEVGTEYSPSTMLYVKG 207 (212)
Q Consensus 187 C~a~n~~g~~~~~~~~l~v~~ 207 (212)
|.+.|..+........|.|..
T Consensus 87 C~~~~~~~~~~~~~~~l~V~~ 107 (210)
T 1lk3_L 87 CQQSWNGPLTFGAGTKLELKR 107 (210)
T ss_dssp EEECSSSSCEECCCEEEEECC
T ss_pred EEEEcCCCceeCCCEEEEEcC
Confidence 999998765444335666655
No 363
>2gi7_A GPVI protein; IG-like domains, blood clotting, cell adhesion; 2.40A {Homo sapiens}
Probab=99.23 E-value=4.9e-11 Score=80.56 Aligned_cols=81 Identities=19% Similarity=0.208 Sum_probs=61.9
Q ss_pred CccccCCcceeEecCCcEEEEEeeeeCCCCceEEEeCCEEecCCCCCceEEcCCCCceeEEEcCCCCCCCeeEEEEEEcc
Q psy2441 113 PQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREMLPVDTSRNPRYNLLTSGAPGALQITNSIEEDQGKYECVAENE 192 (212)
Q Consensus 113 p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~n~ 192 (212)
|.+...+.. .+.+|+.+.|.|.+.+ +.+.+.|++++... ...+ ..|.|.+++.+|+|.|.|.+.|.
T Consensus 9 P~i~~~p~~-~v~~G~~v~L~C~~~~-~~~~~~W~k~g~~~---------~~~~---~~L~i~~v~~~D~G~Y~C~a~n~ 74 (184)
T 2gi7_A 9 PSLQALPSS-LVPLEKPVTLRCQGPP-GVDLYRLEKLSSSR---------YQDQ---AVLFIPAMKRSLAGRYRCSYQNG 74 (184)
T ss_dssp CEEEEESCS-EEETTCCEEEEEECST-TCSEEEEEETTTCC---------EESS---SEEEESSCCGGGCEEEEEEEEET
T ss_pred CeEEeCCCc-cccCCCcEEEEEeCCC-CCCEEEEEECCccc---------cCcc---cEEEECcCChhhCceEEEEEEcC
Confidence 666666654 7889999999999987 77899999987541 1122 78999999999999999999998
Q ss_pred ccc-ceecceEEEEec
Q psy2441 193 VGT-EYSPSTMLYVKG 207 (212)
Q Consensus 193 ~g~-~~~~~~~l~v~~ 207 (212)
.|. ..+..+.|.|.+
T Consensus 75 ~g~~~~s~~~~l~V~~ 90 (184)
T 2gi7_A 75 SLWSLPSDQLELVATG 90 (184)
T ss_dssp TEEBCCCCCEEEEEES
T ss_pred CCccCCCCCEEEEecC
Confidence 763 223336677654
No 364
>2c1o_A IGK-C protein; FAB fragment, enantioselective, finrozole, immune system, antibody, ENA11His antibody, immunoglobulin domain; 2.75A {Mus musculus}
Probab=99.23 E-value=4.7e-11 Score=84.71 Aligned_cols=95 Identities=24% Similarity=0.377 Sum_probs=66.9
Q ss_pred CccccCCcceeEecCCcEEEEEeeeeCC-----CCceEEEeCC--EEe----------cCCCCCceEEcCCCCceeEEEc
Q psy2441 113 PQITEAPSTKVVEISHTTVLHCSASGNP-----PPKISWIREM--LPV----------DTSRNPRYNLLTSGAPGALQIT 175 (212)
Q Consensus 113 p~~~~~~~~~~~~~g~~~~l~C~~~~~p-----~~~i~W~~~~--~~~----------~~~~~~~~~~~~~~~~~~l~i~ 175 (212)
+.+...+....+.+|+.+.|.|.+.+.| .+.+.|++++ ..+ ......++....++....|.|.
T Consensus 39 ~~~~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~ 118 (254)
T 2c1o_A 39 LVMTQSPLTLSVTIGQPASISCKSSQSLLYSNGKTYLNWLLQRPGQSPKRLIYLVSKLDSGDPDRFTGSGSGTDFTLKIS 118 (254)
T ss_dssp CCEEEECSEEEECTTSCEEEEEEESSCCBCSSSCBCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEES
T ss_pred eeEEeCCceEEecCCCcEEEEeeccCcccccCCCCceEEEEeCCCCCceEEEEeccccCCCccceEEEecCCCEEEEEEC
Confidence 5555556778899999999999999887 4899999743 211 1111245555443334689999
Q ss_pred CCCCCCCeeEEEEEEcccccceecceEEEEec
Q psy2441 176 NSIEEDQGKYECVAENEVGTEYSPSTMLYVKG 207 (212)
Q Consensus 176 ~~~~~d~g~y~C~a~n~~g~~~~~~~~l~v~~ 207 (212)
+++.+|+|.|.|.|.|..+........+.|..
T Consensus 119 ~v~~~D~G~Y~C~a~n~~~~~~~~~~~l~V~~ 150 (254)
T 2c1o_A 119 RVEAEDLGIYYCVQGSHFPPTFGAGTKLELKR 150 (254)
T ss_dssp SCCGGGCSEEEEEECSSSSCEEBCCEEEEECC
T ss_pred cCCcccCEEEEEEEEcCcceEecCCEEEEECC
Confidence 99999999999999998654433324566654
No 365
>3r06_A Anti-mouse CD3epsilon antibody 2C11 FAB light CHA; anti-CD3epsilon, T-cell receptor, signalling, IMMU; 2.50A {Cricetulus migratorius} PDB: 3r08_L 3ld8_B 3ldb_B*
Probab=99.23 E-value=9.9e-11 Score=80.74 Aligned_cols=93 Identities=24% Similarity=0.429 Sum_probs=65.3
Q ss_pred ccccCCcceeEecCCcEEEEEeeeeCCCCceEEEeCC---EE--e-------cCCCCCceEEcCCCCceeEEEcCCCCCC
Q psy2441 114 QITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREM---LP--V-------DTSRNPRYNLLTSGAPGALQITNSIEED 181 (212)
Q Consensus 114 ~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~---~~--~-------~~~~~~~~~~~~~~~~~~l~i~~~~~~d 181 (212)
.+...+....+.+|+.+.|.|.+.+.|.+.+.|++.. .. + ......++..........|.|.+++.+|
T Consensus 3 ~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D 82 (213)
T 3r06_A 3 QMTQSPSSLPASLGDRVTINCQASQDISNYLNWYQQKPGKAPKLLIYYTNKLADGVPSRFSGSGSGRDSSFTISSLESED 82 (213)
T ss_dssp CEEEECSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGG
T ss_pred eeEeCCCEEEecCCCcEEEEEEeCCCcCceEEEEEECCCCCcEEEEEEcCcCCCCCCCcEEEeccCCEEEEEECCCCccc
Confidence 3444466677889999999999999998999999832 11 0 0011345554433334689999999999
Q ss_pred CeeEEEEEEcccccceecceEEEEe
Q psy2441 182 QGKYECVAENEVGTEYSPSTMLYVK 206 (212)
Q Consensus 182 ~g~y~C~a~n~~g~~~~~~~~l~v~ 206 (212)
+|.|.|.|.|..+........|.|.
T Consensus 83 ~G~Y~C~~~~~~~~~~~~~~~l~V~ 107 (213)
T 3r06_A 83 IGSYYCQQYYNYPWTFGPGTKLEIK 107 (213)
T ss_dssp CSEEEEEECSSSSCEECCCEEEEEC
T ss_pred CEEEEEecccCCceEEcCCceEEEe
Confidence 9999999998765444333566663
No 366
>1ugn_A LIR1, leukocyte immunoglobulin-like receptor 1; immunoglobulin-like folds, immune system; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 3d2u_D* 1g0x_A 1p7q_D 1ufu_A 1vdg_A 2gw5_A 2dyp_D 2otp_A 3q2c_A
Probab=99.22 E-value=1.6e-11 Score=83.91 Aligned_cols=90 Identities=22% Similarity=0.354 Sum_probs=64.5
Q ss_pred CccccCCcceeEecCCcEEEEEeeeeCCCCceEEEeCCEEecCCCCCceEEcCCCCceeEEEcCCCCCCCeeEEEEEEcc
Q psy2441 113 PQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREMLPVDTSRNPRYNLLTSGAPGALQITNSIEEDQGKYECVAENE 192 (212)
Q Consensus 113 p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~n~ 192 (212)
|.+...+. ..+.+|+.+.|.|.+.+.|. .+.|++++..+............+ ..|.|.+++.+|+|.|.|.|.|.
T Consensus 6 P~i~~~p~-~~v~~G~~v~L~C~~~~~~~-~~~W~k~g~~~~~~~~~~~~~~~~---~~L~i~~v~~~D~G~Y~C~a~n~ 80 (198)
T 1ugn_A 6 PTLWAEPG-SVITQGSPVTLRCQGGQETQ-EYRLYREKKTAPWITRIPQELVKK---GQFPIPSITWEHTGRYRCYYGSD 80 (198)
T ss_dssp CEEEEESC-SEEETTCCEEEEEECCTTCC-CEEEEESSSCCHHHHTSCHHHHTT---TEEEESSCCGGGCEEEEEEEEET
T ss_pred CeEeccCC-CcccCCCcEEEEEEecCCCc-EEEEEECCccccccccccccCCcc---cEEEECCCCHHHCeEEEEEEECC
Confidence 66666665 37889999999999988876 799999987664210111111122 78999999999999999999998
Q ss_pred c-cc-ceecceEEEEec
Q psy2441 193 V-GT-EYSPSTMLYVKG 207 (212)
Q Consensus 193 ~-g~-~~~~~~~l~v~~ 207 (212)
. |. .....+.|.|..
T Consensus 81 ~~g~~~~s~~~~l~V~~ 97 (198)
T 1ugn_A 81 TAGRSESSDPLELVVTG 97 (198)
T ss_dssp TTEECCCCCCEEEEEEC
T ss_pred CCCcccCCccEEEEEcc
Confidence 7 52 222337777766
No 367
>3sgj_C Human FCG3A receptor; receptor complex, FC receptor, antibody, immune system; HET: NAG BMA MAN FUC; 2.20A {Homo sapiens} PDB: 3sgk_C*
Probab=99.22 E-value=7.2e-11 Score=81.14 Aligned_cols=80 Identities=18% Similarity=0.309 Sum_probs=64.1
Q ss_pred CccccCCcceeEecCCcEEEEEeeeeCCCCc-eEEEeCCEEecCCCCCceEEcCCCCceeEEEcCCCCCCCeeEEEEEEc
Q psy2441 113 PQITEAPSTKVVEISHTTVLHCSASGNPPPK-ISWIREMLPVDTSRNPRYNLLTSGAPGALQITNSIEEDQGKYECVAEN 191 (212)
Q Consensus 113 p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~-i~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~n 191 (212)
|.+...+....+.+|+.+.|.|.+.+.|.+. +.|++++..+... . ..|.|.+++.+|+|.|.|.+.|
T Consensus 8 p~i~~~p~~~~v~~G~~v~L~C~~~~~p~~~~v~W~k~g~~l~~~-~-----------~~L~i~~v~~~D~G~Y~C~a~n 75 (204)
T 3sgj_C 8 AVVFLEPQWYRVLEKDSVTLKCQGAYSPEDQSTQWFHNESLISSQ-A-----------SSYFIDAATVDDSGEYRCQTQL 75 (204)
T ss_dssp CEEEEESCCSEEETTCCEEEEEECCSSSSCCCEEEEETTEEESCC-S-----------SEEEESSCCGGGCEEEEEEETT
T ss_pred CeEEEcCCCeEEECCCCEEEEEcCCCCCCCcEEEEEECCEEcccC-c-----------cEEEEecccccCCEEEEEEeCC
Confidence 5666666667789999999999999988775 9999999887653 1 6899999999999999999988
Q ss_pred ccccceecceEEEEec
Q psy2441 192 EVGTEYSPSTMLYVKG 207 (212)
Q Consensus 192 ~~g~~~~~~~~l~v~~ 207 (212)
...+ .. +.|.|..
T Consensus 76 ~~~s--~~-~~l~V~~ 88 (204)
T 3sgj_C 76 STLS--DP-VQLEVHI 88 (204)
T ss_dssp SBCC--CC-EEEEEEC
T ss_pred Cccc--cc-EEEEEec
Confidence 5333 23 6666654
No 368
>3nl4_L Antigen binding fragment, immunoglobulin IGG - LI; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_L
Probab=99.22 E-value=1.6e-10 Score=79.69 Aligned_cols=94 Identities=22% Similarity=0.336 Sum_probs=65.9
Q ss_pred ccccCCcceeEecCCcEEEEEeeeeCCCCceEEEeCC--EEec----------CCCCCceEEcCCCCceeEEEcCCCCCC
Q psy2441 114 QITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREM--LPVD----------TSRNPRYNLLTSGAPGALQITNSIEED 181 (212)
Q Consensus 114 ~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~--~~~~----------~~~~~~~~~~~~~~~~~l~i~~~~~~d 181 (212)
.+...+....+.+|+.+.|.|.+.+.|.+.+.|+++. .... .....++.....+...+|.|.+++.+|
T Consensus 3 ~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D 82 (213)
T 3nl4_L 3 VMTQTPASVSEPVGGTVTIKCQASQSISSYLAWYQQKPGQRPRLLIYETSTLASGVPSRFKGSGSGTDFTLTISDLECAD 82 (213)
T ss_dssp CEEEECSEEEEETTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEECSCCGGG
T ss_pred cEEeCCCeEEEcCCCCEEEEEEecCCCCceEEEEEECCCCCcEEEEEeCCccCCCCCccEEEecCCCEEEEEECCCChHH
Confidence 4444566678899999999999999999999999842 1110 001245554444344689999999999
Q ss_pred CeeEEEEEEccccc--ceecceEEEEec
Q psy2441 182 QGKYECVAENEVGT--EYSPSTMLYVKG 207 (212)
Q Consensus 182 ~g~y~C~a~n~~g~--~~~~~~~l~v~~ 207 (212)
+|.|.|.|.|..+. .......+.|..
T Consensus 83 ~G~Y~C~~~~~~~~~~~~~~~~~l~V~~ 110 (213)
T 3nl4_L 83 AATYYCQSTYENPTYVSFGGGTEVGVKG 110 (213)
T ss_dssp CEEEEEEECCSSTTTCEECCCEEEEEEC
T ss_pred CEEEEEecCCCCceeEEeCCCeEEEEeC
Confidence 99999999997763 222225666644
No 369
>2r15_A Myomesin-1; sarcomeric protein, IG-like domains, homodimer, immunoglobul domain, muscle protein, thick filament, contractIle protein; 2.24A {Homo sapiens}
Probab=99.22 E-value=9.5e-11 Score=80.67 Aligned_cols=90 Identities=18% Similarity=0.307 Sum_probs=61.1
Q ss_pred ceeeEEEeeccCCCcceecccccCC--------------------CCCeEE-eCCCccEEeeCCeEEEEcccCCCCCCcE
Q psy2441 3 IGTYIKIKPNLFSPLSVYSADKIPP--------------------GFPQIT-EAPSTKVVEISHTTVLHCSASGNPPPKI 61 (212)
Q Consensus 3 ~g~Y~C~~~~~~~~~~~~~~~~~~~--------------------~~p~~~-~~~~~~~v~~g~~v~l~C~~~~~p~~~v 61 (212)
+|.|+|.+.|..+..... ..+.+. .+|.+. ..+....+.+|+.+.|.|.+.+.|.+.+
T Consensus 71 ~G~Y~C~~~n~~~~~~~~-~~l~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~v 149 (212)
T 2r15_A 71 KGKYVMELFDGKTGHQKT-VDLSGQAYDEAYAEFQRLKQAAIAEKNRARVLGGLPDVVTIQEGKALNLTCNVWGDPPPEV 149 (212)
T ss_dssp CEEEEEEEECSSCEEEEE-EEECHHHHHHHHHHHHHHHHHHHHHHHSCEEEEBCCSEEEEETTCCEEEEEEEECSSCCEE
T ss_pred CEEEEEEEecCCcceEEE-EEEEEeeccchhhhccccCcccccccCCCcccccCCCcEEEccCCeEEEEEEEcCCCCceE
Confidence 589999999977654322 222211 134444 5566788999999999999999999999
Q ss_pred EEEeCCEEecCCCCCeeEEeecCCCCeEEEeeeC
Q psy2441 62 SWIREMLPVDTSRNPRYNLLTSGAPGTYIKIKPN 95 (212)
Q Consensus 62 ~W~k~g~~l~~~~~~~~~~~~~~~~g~~l~i~~~ 95 (212)
.|+|+|.++... .++.+...++....|.|.++
T Consensus 150 ~W~~~~~~~~~~--~~~~~~~~~~~~~~L~i~~~ 181 (212)
T 2r15_A 150 SWLKNEKALAQT--DHCNLKFEAGRTAYFTINGV 181 (212)
T ss_dssp EEEETTEEECCC--SSEEEEEETTTEEEEEESSC
T ss_pred EEEECCeECccC--CCEEEEEcCCCEEEEEEcCc
Confidence 999999999876 55555443222233444444
No 370
>4f9p_D 103.2 anti-BTN3A1 antibody fragment; B7 superfamily, butyrophilin, CD277, immune system; 3.52A {Mus musculus}
Probab=99.21 E-value=5.7e-09 Score=71.97 Aligned_cols=155 Identities=23% Similarity=0.325 Sum_probs=97.0
Q ss_pred ccEEeeCCeEEEEcccCCCCCC--cEEEEeC--CEE------ec---------CCCCCeeEEeecC-CCCeEEEeeeCCc
Q psy2441 38 TKVVEISHTTVLHCSASGNPPP--KISWIRE--MLP------VD---------TSRNPRYNLLTSG-APGTYIKIKPNLF 97 (212)
Q Consensus 38 ~~~v~~g~~v~l~C~~~~~p~~--~v~W~k~--g~~------l~---------~~~~~~~~~~~~~-~~g~~l~i~~~~~ 97 (212)
...++.|+.+.|.|.+.|.... .+.|+|. |+. |. ..-+.|+.+..+. .+..||.+.+...
T Consensus 9 ~~lvkPG~Sl~lSC~~SG~tf~~y~~~WvRQaPGkgLEWvg~I~~~~g~t~Y~~s~kgR~TiSrD~s~nt~yLqm~sL~~ 88 (254)
T 4f9p_D 9 AEVVRPGTSVKVSCKASGYAFTSYLIHWIKQRPGQGLEWIGVINPRSGDSHYNEKFKDRTTLTADQSSSTAYMQLSSLTS 88 (254)
T ss_dssp CEEECTTCCEEEEEEEESSCGGGCCEEEEEEETTTEEEEEEEEETTTTEEECCTTTTTTEEEEEETTTTEEEEEECSCCG
T ss_pred CceECCCCCeEEEEEEeCCChhhCcEEEEEeCCCCCeEEEEEEcCCCCCEEECHHhCCCEEEeeccCCCcCeeEEccCCC
Confidence 3457889999999999876433 4788873 211 11 1125788887763 4446666666655
Q ss_pred cceeEEeecCCC--------------------C-CCC-------------ccccCCcceeEecCCcEEEEEeeeeCCCCc
Q psy2441 98 SPLSVYSADKIP--------------------P-GFP-------------QITEAPSTKVVEISHTTVLHCSASGNPPPK 143 (212)
Q Consensus 98 ~~~~v~~~~~~~--------------------~-~~p-------------~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~ 143 (212)
.+..+|.+.... + ..| .+...|..+.+.+|+.+.|.|.+...-...
T Consensus 89 eDTAvYYCAr~~~~d~WGqGT~VTVSSast~~ps~~~l~~~~sgGSgsdivltQsP~slsvs~G~~vtlsC~~S~~~~~~ 168 (254)
T 4f9p_D 89 DDSAVYFCARSDYGAYWGQGTLVTVSAAGGGGSGGGGSGGGGSGGGGSDIVLTQSPVTLSVTPGDSVSLSCRASQSISNN 168 (254)
T ss_dssp GGCEEEECEESSSCCEECCCEEEEECC-------------------CCSCCEEEECSEEEECTTCEEEEEEEESSCCTTC
T ss_pred CCCEEEEEEecCCCCCcCCCEEEEEeCCCCcCCCCCCCccccccccccccccccCCceeEEcCCCcEeeEEEccCcccCC
Confidence 555555542110 0 000 112234556788999999999987655557
Q ss_pred eEEEeC--CEEe----------cCCCCCceEEcCCCCceeEEEcCCCCCCCeeEEEEEEcc
Q psy2441 144 ISWIRE--MLPV----------DTSRNPRYNLLTSGAPGALQITNSIEEDQGKYECVAENE 192 (212)
Q Consensus 144 i~W~~~--~~~~----------~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~n~ 192 (212)
+.|++. ++.. ...-..||....++...+|+|..+..+|.+.|.|...+.
T Consensus 169 l~WyqQ~PG~~p~lLiy~~s~~~sGvp~RFSgS~sgt~ftLtIs~lq~eD~A~YYC~q~~~ 229 (254)
T 4f9p_D 169 LHWYRQKSHESPRLLIKYASQSIFGIPSRFSGSGSGTEFTLSINSVETEDFGIYFCQQSNS 229 (254)
T ss_dssp CEEEEECTTSCCEEEEETTTEECTTSCTTCEEECCTTEEEEEEESCCTTCCEEEEEEECSS
T ss_pred cEEEEECCCCCCEEEEEeeeecCCCCCCCEEeeeeCCEEEEEECCCCHHHCEEEEEeecCC
Confidence 899862 2211 111124666555555678999999999999999976554
No 371
>1qfw_M FV, antibody (anti beta subunit) (light chain); glycoprotein hormone; HET: NAG; 3.50A {Mus musculus} SCOP: b.1.1.1
Probab=99.20 E-value=1.6e-10 Score=71.07 Aligned_cols=76 Identities=20% Similarity=0.294 Sum_probs=55.4
Q ss_pred CCcceeEecCCcEEEEEeeeeCCCCceEEEeCC--E---Eec-C------CCCCceEEcCCCCceeEEEcCCCCCCCeeE
Q psy2441 118 APSTKVVEISHTTVLHCSASGNPPPKISWIREM--L---PVD-T------SRNPRYNLLTSGAPGALQITNSIEEDQGKY 185 (212)
Q Consensus 118 ~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~--~---~~~-~------~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y 185 (212)
.+....+.+|+++.|.|.+.+.+.+.+.|++.. . .+. . ....++....+.....|.|.++..+|+|.|
T Consensus 7 ~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y 86 (108)
T 1qfw_M 7 SPKSMSMSVGERVTLSCKASETVDSFVSWYQQKPEQSPKLLIFGASNRFSGVPDRFTGSGSATDFTLTISSVQAEDFADY 86 (108)
T ss_dssp ECSCEECCTTCCEEEEEEESSCCCSCEEEEEECTTSCCEEEECSSSCBCTTCCTTEECCBCSSEEEEEESSCCTTCCSEE
T ss_pred eCCeEEEcCCCCEEEEeeeCCCCCcEEEEEEECCCCCCEEEEEEcCccCCCCCCcEEEEcCCCEEEEEECCCChhhCEEE
Confidence 455567889999999999988877899999843 1 111 0 012455544333346899999999999999
Q ss_pred EEEEEccc
Q psy2441 186 ECVAENEV 193 (212)
Q Consensus 186 ~C~a~n~~ 193 (212)
.|.+.+..
T Consensus 87 ~C~~~~~~ 94 (108)
T 1qfw_M 87 HCGQTYNH 94 (108)
T ss_dssp EEEECSSS
T ss_pred EEEEccCC
Confidence 99998853
No 372
>2e27_L Anti-ciguatoxin antibody, light chain; immunoglobulin fold, immune system; HET: AB0; 1.70A {Mus musculus} PDB: 3iy1_A
Probab=99.20 E-value=1.5e-10 Score=72.51 Aligned_cols=93 Identities=22% Similarity=0.344 Sum_probs=62.5
Q ss_pred cccCCcceeEecCCcEEEEEeeeeCCCCceEEEeCC--EE---ec-C------CCCCceEEcCCCCceeEEEcCCCCCCC
Q psy2441 115 ITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREM--LP---VD-T------SRNPRYNLLTSGAPGALQITNSIEEDQ 182 (212)
Q Consensus 115 ~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~--~~---~~-~------~~~~~~~~~~~~~~~~l~i~~~~~~d~ 182 (212)
+...+....+.+|+++.|.|.+.+.+.+.+.|++.. .. +. . ....++....+.....|.|.++..+|+
T Consensus 6 v~q~p~~v~v~~G~~vtL~C~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~L~I~~v~~~Ds 85 (119)
T 2e27_L 6 MTQSPSSLSASLGGKVTITCKANQDIKKKIAWYQHKPGKGPRLLIYYTSTLKSGISSRFSGSGSGRDYSFSISNLEPEDA 85 (119)
T ss_dssp EEEECSEEEEETTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEECSCCGGGC
T ss_pred eEecCCeEEEeCCCCEEEEEEeCCCCCceEEEEEECCCCCCEEEEEECCccCCCCCCcEEEEccCCEEEEEECCCChHHC
Confidence 344456677899999999999988888899999843 11 11 0 113455544333346899999999999
Q ss_pred eeEEEEEEcccccceecceEEEEec
Q psy2441 183 GKYECVAENEVGTEYSPSTMLYVKG 207 (212)
Q Consensus 183 g~y~C~a~n~~g~~~~~~~~l~v~~ 207 (212)
|.|.|.+.|...........|.|..
T Consensus 86 G~Y~C~~~~~~~~~fg~GT~l~v~~ 110 (119)
T 2e27_L 86 ATYYCLQYDNFTWTFGGGTKLEIKR 110 (119)
T ss_dssp EEEEEEECGGGCCEECCCEEEEEEC
T ss_pred EEEEEEEccCCceEECCCEEEEEeC
Confidence 9999999885322222224555544
No 373
>1nbq_A JAM, junctional adhesion molecule 1, PAM-1; reovirus receptor, tight junction formation, immunoglobulin superfamily, immune system; 2.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4 PDB: 3eoy_G
Probab=99.20 E-value=3.5e-11 Score=82.59 Aligned_cols=91 Identities=21% Similarity=0.387 Sum_probs=65.0
Q ss_pred CccccCCcceeEecCCcEEEEEeeeeCCCCceEEEeCCEEec----------CCCCCceEEcCCCCceeEEEcCCCCCCC
Q psy2441 113 PQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREMLPVD----------TSRNPRYNLLTSGAPGALQITNSIEEDQ 182 (212)
Q Consensus 113 p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~----------~~~~~~~~~~~~~~~~~l~i~~~~~~d~ 182 (212)
..+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+. .....++.... ..|.|.+++.+|+
T Consensus 5 ~~i~~~~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~r~~~~~----~~L~i~~~~~~d~ 80 (209)
T 1nbq_A 5 VTVHSSEPEVRIPENNPVKLSCAYSGFSSPRVEWKFDQGDTTRLVCYNNKITASYEDRVTFLP----TGITFKSVTREDT 80 (209)
T ss_dssp CEEECSCSBCCEETTCCCEEECEEESCSSEEEEEEEEETTEEEESEETTEECTTTTTTCEEET----TEEECSCCCTTSC
T ss_pred EEEEcCCCceEEEcCCCEEEEEEEeCCCCcEEEEEEcCCceeEEEEecCccCccccCceEeec----cEEEEeeCCHHHC
Confidence 445556667778899999999999999999999999765421 11123443332 6899999999999
Q ss_pred eeEEEEEEcccccceec-ceEEEEec
Q psy2441 183 GKYECVAENEVGTEYSP-STMLYVKG 207 (212)
Q Consensus 183 g~y~C~a~n~~g~~~~~-~~~l~v~~ 207 (212)
|.|.|.+.|..|..... .+.|.|..
T Consensus 81 G~Y~C~~~~~~g~~~~~~~~~l~V~~ 106 (209)
T 1nbq_A 81 GTYTCMVSEEGGNSYGEVKVKLIVLV 106 (209)
T ss_dssp SEEEEEEEETTSSCEECCEEECCEEB
T ss_pred cEEEEEEecCCCCccceEEEEEEEec
Confidence 99999999986633222 14444443
No 374
>4hwn_A FC receptor-like A; FCRLA, FCRL, IG-C2 domain, IG superfamily, immune system, ST genomics, PSI-biology; 2.01A {Homo sapiens}
Probab=99.20 E-value=6.7e-11 Score=72.81 Aligned_cols=85 Identities=24% Similarity=0.328 Sum_probs=57.8
Q ss_pred CccccCCcceeEecCCcEEEEEeeeeCCCC-----ceEEEeCCEEecCCCCCceEEcCCCCceeEEEcCCCCCCCeeEEE
Q psy2441 113 PQITEAPSTKVVEISHTTVLHCSASGNPPP-----KISWIREMLPVDTSRNPRYNLLTSGAPGALQITNSIEEDQGKYEC 187 (212)
Q Consensus 113 p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~-----~i~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C 187 (212)
|.+...+.. .+.+|+.+.|.|.+.+.+.. .+.|++++..+.. ...+ ..|.|.+++.+|+|.|.|
T Consensus 9 P~l~~~p~~-~v~~G~~VtL~C~~~~~~~~~~~~~~~~w~k~g~~l~~-------~~~~---~~l~i~~v~~~dsG~Y~C 77 (108)
T 4hwn_A 9 PILRAVPSA-EPQAGSPMTLSCQTKLPLQRSAARLLFSFYKDGRIVQS-------RGLS---SEFQIPTASEDHSGSYWC 77 (108)
T ss_dssp CEEEEESCS-SCBTTCCEEEEEEC---------CCEEEEEETTEEEEE-------EESC---CEEEESSCCGGGCEEEEE
T ss_pred CEEEecCCC-cCCCCCcEEEEEcccCCCCCcCcceEEEEEECCcCccC-------CCcc---cEEEeCccCcccCeEEEE
Confidence 555555543 46789999999999765543 4999999987652 1122 789999999999999999
Q ss_pred EEEccccc--ceecceEEEEecc
Q psy2441 188 VAENEVGT--EYSPSTMLYVKGT 208 (212)
Q Consensus 188 ~a~n~~g~--~~~~~~~l~v~~~ 208 (212)
.+.|..+. ..++.+.|.|.+.
T Consensus 78 ~~~~~~~~~~~~S~~l~L~V~g~ 100 (108)
T 4hwn_A 78 EAATEDNQVWKQSPQLEIRVQGA 100 (108)
T ss_dssp EEECTTSSSEEECCCEEECCBC-
T ss_pred EEEeCCCceeccCCCEEEEEEec
Confidence 99987642 2344466666553
No 375
>1mqk_L Antibody 7E2 FV fragment, light chain; membrane protein, cytochrome C oxidase, high- resolution structure, immune system; 1.28A {Mus musculus} SCOP: b.1.1.1 PDB: 1ar1_D 3ehb_D* 3hb3_D* 1qle_L* 1f6l_L 3iy2_A 1vfa_A 1dvf_A 1kir_A 1g7i_A 1g7j_A 1a2y_A 1kip_A 1kiq_A 1vfb_A 1g7h_A 1a7o_L 1g7l_A 1g7m_A 1a7n_L ...
Probab=99.20 E-value=1.2e-10 Score=73.10 Aligned_cols=92 Identities=22% Similarity=0.349 Sum_probs=62.0
Q ss_pred cCCcceeEecCCcEEEEEeeeeCCCCceEEEeCC--EE---e-cC------CCCCceEEcCCCCceeEEEcCCCCCCCee
Q psy2441 117 EAPSTKVVEISHTTVLHCSASGNPPPKISWIREM--LP---V-DT------SRNPRYNLLTSGAPGALQITNSIEEDQGK 184 (212)
Q Consensus 117 ~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~--~~---~-~~------~~~~~~~~~~~~~~~~l~i~~~~~~d~g~ 184 (212)
..+....+.+|+.+.|.|.+.+.+.+.+.|+++. .. + .. ....|+.........+|.|.++..+|+|.
T Consensus 6 q~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~g~~~~~li~~~~~~~~~~~~R~~~~~~~~~~~L~I~~v~~~DsG~ 85 (120)
T 1mqk_L 6 QTPVSLSASVGETVTITCRASENIYSYLAWYQQKQGKSPQFLVYNAKTLGEGVPSRFSGSGSGTQFSLKINSLLPEDFGS 85 (120)
T ss_dssp EECSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEE
T ss_pred ecCCeEEEcCCCcEEEEEEeCCCCCceEEEEEECCCCCCEEEEEeCCcCCCCCCceEEEeccCCEEEEEECCCCHHHCEE
Confidence 3455677889999999999988878899999843 21 1 00 11345554433334689999999999999
Q ss_pred EEEEEEccc-ccceecceEEEEecc
Q psy2441 185 YECVAENEV-GTEYSPSTMLYVKGT 208 (212)
Q Consensus 185 y~C~a~n~~-g~~~~~~~~l~v~~~ 208 (212)
|.|.+.|.. .........|.|...
T Consensus 86 Y~C~~~~~~~~~~fg~gt~L~V~~~ 110 (120)
T 1mqk_L 86 YYCQHHYGTPPLTFGGGTKLEIKRE 110 (120)
T ss_dssp EEEEECSSSSSCCBCCCEEEEEC--
T ss_pred EEEEEEeCCCceEECCCeEEEEecC
Confidence 999998853 222222266676543
No 376
>3udw_C Poliovirus receptor; PVR tigit IGSF signal transduction immunology, IGSF, cell SU receptor signalling, glycosylation, membrane protein; HET: NAG; 2.90A {Homo sapiens}
Probab=99.20 E-value=1.3e-10 Score=72.43 Aligned_cols=86 Identities=19% Similarity=0.268 Sum_probs=59.5
Q ss_pred eeEecCCcEEEEEee-eeCCCCc----eEEEeCCEEecC-----------CCCCceEEcCCC-----CceeEEEcCCCCC
Q psy2441 122 KVVEISHTTVLHCSA-SGNPPPK----ISWIREMLPVDT-----------SRNPRYNLLTSG-----APGALQITNSIEE 180 (212)
Q Consensus 122 ~~~~~g~~~~l~C~~-~~~p~~~----i~W~~~~~~~~~-----------~~~~~~~~~~~~-----~~~~l~i~~~~~~ 180 (212)
..+.+|+.+.|.|.+ .+.+.+. +.|++++..... ....++.+..+. ...+|.|.+++.+
T Consensus 10 v~~~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~sL~I~~v~~~ 89 (118)
T 3udw_C 10 VPGFLGDSVTLPCYLQVPNMEVTHVSQLTWARHGESGSMAVFHQTQGPSYSESKRLEFVAARLGAELRNASLRMFGLRVE 89 (118)
T ss_dssp EEEETTSCEEECCEEECCTTCCCEEEEEEEEETTCSBCSEEEETTTEEEETTCSSEEETTCCTTSCCCBCCEEECSCCGG
T ss_pred EEEeeCCcEEEEEEeECCCCCCCceEEEEEEEcCCCceEEEEeCCCCCccCCcCcEEEecccccCCCCCcEEEEeecChH
Confidence 668889999999999 4455444 999997432110 013445444421 0368999999999
Q ss_pred CCeeEEEEEEc-ccccceecceEEEEecc
Q psy2441 181 DQGKYECVAEN-EVGTEYSPSTMLYVKGT 208 (212)
Q Consensus 181 d~g~y~C~a~n-~~g~~~~~~~~l~v~~~ 208 (212)
|+|.|.|.+.+ ..|..... +.|.|.++
T Consensus 90 D~G~Y~C~v~~~~~~~~~~~-~~L~V~~~ 117 (118)
T 3udw_C 90 DEGNYTCLFVTFPQGSRSVD-IWLRVLAK 117 (118)
T ss_dssp GCEEEEEEEEEETTEEEEEE-EEEEEEC-
T ss_pred HCeEEEEEEEECCCCCccce-EEEEEEeC
Confidence 99999999998 66655555 77777664
No 377
>3b5h_A Cervical EMMPRIN, HAB18G/CD147; IG-like domain, cell invasion; 2.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.20 E-value=1.5e-10 Score=77.93 Aligned_cols=89 Identities=16% Similarity=0.210 Sum_probs=61.4
Q ss_pred ceeeEEEeeccCCCcceecccccCCCCCeEEeCCCccEEeeCCeEEEEcccCCCC-CCcEEEEe---CC-EEecCCCCCe
Q psy2441 3 IGTYIKIKPNLFSPLSVYSADKIPPGFPQITEAPSTKVVEISHTTVLHCSASGNP-PPKISWIR---EM-LPVDTSRNPR 77 (212)
Q Consensus 3 ~g~Y~C~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p-~~~v~W~k---~g-~~l~~~~~~~ 77 (212)
+|.|+|.+.|... ....+.+..+|.+...+....+.+|+.+.|.|.+.+.| .+.+.|+| ++ ..+......+
T Consensus 61 ~G~Y~C~~~n~~~----~~~~l~V~~~P~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~i~W~~~~~~~~~~~~~~~~~~ 136 (184)
T 3b5h_A 61 WGEYSCVFLPEPM----GTANIQLHGPPRVKAVKSSEHINEGETAMLVCKSESVPPVTDWAWYKITDSEDKALMNGSESR 136 (184)
T ss_dssp CEEEEEEEESTTS----CEEEEEECCSCCCEESCSEEEECTTSCEEEEEECCCSSCCCEEEEEECCSSSCEECCTTGGGT
T ss_pred CeEEEEEEECCcC----cEEEEEEecCCceeecCCCcEEcCCCcEEEEEEECCCCCCCeEEEEEcCCCCCEEeecCCCCE
Confidence 5999999998222 23345557889888888888899999999999999999 78999999 44 4443332355
Q ss_pred eEEeecCCCCeEEEeeeCC
Q psy2441 78 YNLLTSGAPGTYIKIKPNL 96 (212)
Q Consensus 78 ~~~~~~~~~g~~l~i~~~~ 96 (212)
+.+... +....|.|.++.
T Consensus 137 ~~~~~~-~~~~~L~i~~v~ 154 (184)
T 3b5h_A 137 FFVSSS-QGRSELHIENLN 154 (184)
T ss_dssp EEEEEE-TTEEEEEECSCC
T ss_pred EEEEec-CCeeEEEEeecc
Confidence 555543 233344444443
No 378
>1hng_A CD2; T lymphocyte adhesion glycoprotein; 2.80A {Rattus rattus} SCOP: b.1.1.1 b.1.1.3
Probab=99.19 E-value=6.8e-11 Score=79.35 Aligned_cols=83 Identities=19% Similarity=0.282 Sum_probs=61.9
Q ss_pred eeEecCCcEEEEEeeee--CCCCceEEEeCCEEecC--------CCCCceEEcCCCCceeEEEcCCCCCCCeeEEEEEEc
Q psy2441 122 KVVEISHTTVLHCSASG--NPPPKISWIREMLPVDT--------SRNPRYNLLTSGAPGALQITNSIEEDQGKYECVAEN 191 (212)
Q Consensus 122 ~~~~~g~~~~l~C~~~~--~p~~~i~W~~~~~~~~~--------~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~n 191 (212)
..+.+|+++.|.|.... .+.+.|.|++++..+.. ....++.+..+ +.|.|.+++.+|+|.|.|.|.|
T Consensus 6 v~~~~G~~v~L~c~~~~~~~~~~~i~W~k~~~~i~~~~~~~~~~~~~~r~~~~~~---gsL~I~~v~~~D~G~Y~C~~~n 82 (176)
T 1hng_A 6 VWGALGHGINLNIPNFQMTDDIDEVRWERGSTLVAEFKRKMKPFLKSGAFEILAN---GDLKIKNLTRDDSGTYNVTVYS 82 (176)
T ss_dssp EEEETTSCEEECCTTCCCCTTEEEEEEEETTEEEEEEETTSCCEESSTTEEECTT---SCEEESSCCGGGCEEEEEEEEE
T ss_pred EEEEcCCcEEEcCCCCCcccccccEEEEeCCceeEEEcCCCeecCCCCeEEECCC---CcEEEcccccccCEEEEEEEEe
Confidence 45678999999995433 55679999999865431 02356666555 5699999999999999999999
Q ss_pred ccccc--eecceEEEEecc
Q psy2441 192 EVGTE--YSPSTMLYVKGT 208 (212)
Q Consensus 192 ~~g~~--~~~~~~l~v~~~ 208 (212)
..|.. ... +.|.|...
T Consensus 83 ~~g~~~~~~~-~~l~V~~~ 100 (176)
T 1hng_A 83 TNGTRILNKA-LDLRILEM 100 (176)
T ss_dssp TTCCEEEEEE-EEEEEECC
T ss_pred CCCCEEEEEE-EEEEEeCC
Confidence 98886 333 66666553
No 379
>1uct_A Immunoglobulin alpha FC receptor; beta stands, immune system; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1ovz_A* 1ow0_C*
Probab=99.19 E-value=4.2e-11 Score=83.21 Aligned_cols=90 Identities=18% Similarity=0.172 Sum_probs=63.0
Q ss_pred CccccCCcceeEecCCcEEEEEeeeeCCCCceEEEeCCEEecCCCCCceEEcCCCCce--eEEEcCCCCCCCeeEEEEEE
Q psy2441 113 PQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREMLPVDTSRNPRYNLLTSGAPG--ALQITNSIEEDQGKYECVAE 190 (212)
Q Consensus 113 p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~--~l~i~~~~~~d~g~y~C~a~ 190 (212)
|.+...+. ..+.+|+.+.|.|.+.+ +.+.+.|+|++..+... ........+ .. .|.|.+++.+|+|.|.|.+.
T Consensus 10 P~i~~~p~-~~v~~G~~vtL~C~~~~-~~~~~~W~k~g~~~~~~-~~~~~~~~~--~~~~~L~I~~v~~~D~G~Y~C~a~ 84 (218)
T 1uct_A 10 PFISAKSS-PVIPLDGSVKIQCQAIR-EAYLTQLMIIKNSTYRE-IGRRLKFWN--ETDPEFVIDHMDANKAGRYQCQYR 84 (218)
T ss_dssp CCEEESSC-SEEETTCCEEEEECCCT-TCSEEEEEEEETTEEEE-CSEECC------CCCEEEECSCCGGGCEEEEEEEE
T ss_pred CEEEecCC-CccCCCCCEEEEEEcCC-CCCEEEEEECCCccccc-ccccCCCCc--ceeeEEEEcccccccCEEEEEEEE
Confidence 67776666 46889999999999977 67899999987655432 111100111 14 89999999999999999999
Q ss_pred cccccc-eecceEEEEec
Q psy2441 191 NEVGTE-YSPSTMLYVKG 207 (212)
Q Consensus 191 n~~g~~-~~~~~~l~v~~ 207 (212)
|..|.. .+..+.|.|.+
T Consensus 85 n~~~~~~~s~~~~l~V~~ 102 (218)
T 1uct_A 85 IGHYRFRYSDTLELVVTG 102 (218)
T ss_dssp ETTTEEEECCCEEEEEEC
T ss_pred cCCCceeecCCEEEEEcC
Confidence 976532 22336777765
No 380
>1i8k_A Epidermal growth factor receptor antibody MR1SCFV light chain; antibody-peptide complex, immunoglobulin fold, type II' beta turn., immune system; 1.80A {Mus musculus} SCOP: b.1.1.1 PDB: 1i8i_A
Probab=99.19 E-value=9.2e-11 Score=72.07 Aligned_cols=76 Identities=20% Similarity=0.437 Sum_probs=55.5
Q ss_pred cCCcceeEecCCcEEEEEeeeeCCCCceEEEeCC--EE---ec-C------CCCCceEEcCCCCceeEEEcCCCCCCCee
Q psy2441 117 EAPSTKVVEISHTTVLHCSASGNPPPKISWIREM--LP---VD-T------SRNPRYNLLTSGAPGALQITNSIEEDQGK 184 (212)
Q Consensus 117 ~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~--~~---~~-~------~~~~~~~~~~~~~~~~l~i~~~~~~d~g~ 184 (212)
..+....+.+|+++.|.|.+.+.+.+.+.|++.. .. +. . ....|+....+.....|.|.++..+|+|.
T Consensus 6 q~p~~~~~~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~ 85 (107)
T 1i8k_A 6 QSPASLSVATGEKVTIRCMTSTDIDDDMNWYQQKPGEPPKFLISEGNTLRPGVPSRFSSSGTGTDFVFTIENTLSEDVGD 85 (107)
T ss_dssp EECSEEECCTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGGGCEE
T ss_pred eCCCeEEecCCCCEEEEEEECCCCCCcEEEEEECCCCCCEEEEEecCccCCCCCCCEEEEccCCEEEEEECCCCHHHCEE
Confidence 3455567889999999999988877899999853 11 10 0 01245554433334689999999999999
Q ss_pred EEEEEEcc
Q psy2441 185 YECVAENE 192 (212)
Q Consensus 185 y~C~a~n~ 192 (212)
|.|.+.+.
T Consensus 86 Y~C~~~~~ 93 (107)
T 1i8k_A 86 YYCLQSFN 93 (107)
T ss_dssp EEEEECSS
T ss_pred EEEEEeeC
Confidence 99999875
No 381
>1fnl_A Low affinity immunoglobulin gamma FC region receptor III-B; beta sandwich, immunoglobulin-like, immune system receptor; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1e4j_A 1e4k_C* 1t83_C* 1t89_C* 3ay4_C*
Probab=99.18 E-value=1.1e-10 Score=78.09 Aligned_cols=79 Identities=18% Similarity=0.338 Sum_probs=64.0
Q ss_pred CccccCCcceeEecCCcEEEEEeeeeCCCCc-eEEEeCCEEecCCCCCceEEcCCCCceeEEEcCCCCCCCeeEEEEEEc
Q psy2441 113 PQITEAPSTKVVEISHTTVLHCSASGNPPPK-ISWIREMLPVDTSRNPRYNLLTSGAPGALQITNSIEEDQGKYECVAEN 191 (212)
Q Consensus 113 p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~-i~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~n 191 (212)
|.+...+....+.+|+.+.|.|.+.+.|.+. +.|++++..+... + ..|.|.+++.+|+|.|.|.+.|
T Consensus 8 p~i~~~p~~~~v~~G~~v~L~C~~~~~p~~~~~~W~~~~~~~~~~---------~---~~L~i~~~~~~d~G~Y~C~~~n 75 (175)
T 1fnl_A 8 AVVFLEPQWYSVLEKDSVTLKCQGAYSPEDNSTQWFHNESLISSQ---------A---SSYFIDAATVNDSGEYRCQTNL 75 (175)
T ss_dssp CEEEEESCCSEEETTCCEEEEEECCCBTTBCCCEEEETTEEEESS---------C---SEEEESSCCGGGCEEEEEECSS
T ss_pred CEEEEcCCceeeeCCCcEEEEeeCCCCCCCcceEEEECCEEccCC---------c---eEEEEeCCCcccCEEEEEEeeC
Confidence 6677777777889999999999999988775 8899999877542 1 6899999999999999999998
Q ss_pred ccccceecceEEEEe
Q psy2441 192 EVGTEYSPSTMLYVK 206 (212)
Q Consensus 192 ~~g~~~~~~~~l~v~ 206 (212)
..++. . +.|.|.
T Consensus 76 ~~~s~--~-~~l~V~ 87 (175)
T 1fnl_A 76 STLSD--P-VQLEVH 87 (175)
T ss_dssp SCCCC--C-EEEEEE
T ss_pred Ccccc--c-EEEEEe
Confidence 65533 3 666665
No 382
>3s96_B 3B5H10 FAB light chain; huntingtin, immune system; 1.90A {Mus musculus} PDB: 2qhr_L 3ffd_B 4dcq_A
Probab=99.18 E-value=3.2e-10 Score=78.41 Aligned_cols=92 Identities=22% Similarity=0.342 Sum_probs=64.0
Q ss_pred ccccCCcceeEecCCcEEEEEeeeeC-CCCceEEEeCC---EE-------------ecCCCCCceEEcCCCCceeEEEcC
Q psy2441 114 QITEAPSTKVVEISHTTVLHCSASGN-PPPKISWIREM---LP-------------VDTSRNPRYNLLTSGAPGALQITN 176 (212)
Q Consensus 114 ~~~~~~~~~~~~~g~~~~l~C~~~~~-p~~~i~W~~~~---~~-------------~~~~~~~~~~~~~~~~~~~l~i~~ 176 (212)
.+...+ ...+.+|+.+.|.|.+.+. |.+.+.|++.. .. .......++..........|.|.+
T Consensus 3 ~v~~~p-~~~v~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~ 81 (218)
T 3s96_B 3 VLTQSS-SASFSLGASAKLTCTLNSQHSTYTIEWYQQQPLKPPKYVMELKKDGSHSTGDGIPDRFSGSSSGADRYLSISN 81 (218)
T ss_dssp SEECCS-EEEEETTSCEEEEEEECGGGTTCCEEEEEECTTSCCEEEEEECTTSCEEECSSCCTTEEEEEETTEEEEEESS
T ss_pred eEEeCC-cEEECCCCcEEEEEECCCCCCCcEEEEEEECCCCCeEEEEEEcccCccccCCCcccceEEecCCceEEEEEcc
Confidence 344455 6778899999999999998 88999999832 10 001112345443333347899999
Q ss_pred CCCCCCeeEEEEEEcccc-----cceecceEEEEec
Q psy2441 177 SIEEDQGKYECVAENEVG-----TEYSPSTMLYVKG 207 (212)
Q Consensus 177 ~~~~d~g~y~C~a~n~~g-----~~~~~~~~l~v~~ 207 (212)
++.+|+|.|.|.+.|..| ..... +.|.|..
T Consensus 82 v~~~D~G~Y~C~~~~~~~~~~~~~~~~~-~~l~V~~ 116 (218)
T 3s96_B 82 IQPEDEAIYICGVGDTIKEQFVYVFGGG-TKVTVLG 116 (218)
T ss_dssp CCGGGCEEEEEEEEEEETTEEEEEECCC-EEEEEES
T ss_pred CCcccCEEEEEEEecCCCCceeEEEcCc-EEEEEec
Confidence 999999999999999876 22223 5666663
No 383
>1oll_A NK receptor; immune system/receptor, NK cell triggering receptor, immune system, IG domain, cytotoxicity, C2-type IG-like domains; 1.93A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.17 E-value=1.3e-10 Score=78.69 Aligned_cols=90 Identities=17% Similarity=0.110 Sum_probs=63.2
Q ss_pred CccccCCcceeEecCCcEEEEEeeeeCCCCceEEEeCCEEecCCCCCceEEcCCCCceeEEEcCCCCCCCeeEEEEEEcc
Q psy2441 113 PQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREMLPVDTSRNPRYNLLTSGAPGALQITNSIEEDQGKYECVAENE 192 (212)
Q Consensus 113 p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~n~ 192 (212)
|.+...+.. .+.+|+.+.|.|.+.+. .+.+.|++++..+.... .... .......|.|.+++.+|+|.|.|.+.|.
T Consensus 5 P~i~~~p~~-~v~~G~~v~L~C~~~~~-~~~~~w~k~g~~~~~~~-~~~~--~~~~~~~L~I~~v~~~D~G~Y~C~~~~~ 79 (188)
T 1oll_A 5 PFIWAEPHF-MVPKEKQVTICCQGNYG-AVEYQLHFEGSLFAVDR-PKPP--ERINKVKFYIPDMNSRMAGQYSCIYRVG 79 (188)
T ss_dssp CEEEEESCS-EEETTCCEEEEEECCTT-CCEEEEEETTEEEEEEC-CSSC--TTCCEEEEEESSCCGGGCEEEEEEEEET
T ss_pred CEEEeecCC-cCCCCCCEEEEEecCCC-CCEEEEEECCCcccccc-cccC--CCcceeEEEeCcCCcccCeEEEEEecCC
Confidence 666666665 68899999999998753 46899999998765320 1110 1112378999999999999999999886
Q ss_pred cccc-eecceEEEEec
Q psy2441 193 VGTE-YSPSTMLYVKG 207 (212)
Q Consensus 193 ~g~~-~~~~~~l~v~~ 207 (212)
.+.. .+..+.|.|.+
T Consensus 80 ~~~~~~s~~~~l~V~~ 95 (188)
T 1oll_A 80 ELWSEPSNLLDLVVTE 95 (188)
T ss_dssp TEECCCCCCEEEEEES
T ss_pred CCCCCCCCceEEEecc
Confidence 5432 23336777764
No 384
>1jbj_A CD3 epsilon and gamma ectodomain fragment complex; beta-sheet, C2-SET immunoglobulin superfamily, H-bonded G strand PAIR, single-chain; NMR {Mus musculus} SCOP: b.1.1.4 b.1.1.4 PDB: 1xmw_A
Probab=99.17 E-value=5.6e-11 Score=80.48 Aligned_cols=63 Identities=19% Similarity=0.327 Sum_probs=52.2
Q ss_pred eEecCCcEEEEEeeeeCCCCceEEEeCCEEecCCCCCceEEcCCCCceeEEEcC-CCCCCCeeEEEEEEccccccee
Q psy2441 123 VVEISHTTVLHCSASGNPPPKISWIREMLPVDTSRNPRYNLLTSGAPGALQITN-SIEEDQGKYECVAENEVGTEYS 198 (212)
Q Consensus 123 ~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~-~~~~d~g~y~C~a~n~~g~~~~ 198 (212)
....|+.+.|.|.+.+ + +.+.|++++..+... .+ .+|.|.+ +..+|+|.|.|.|.|..|....
T Consensus 10 v~~~G~~v~L~C~~~~-~-~~i~W~k~g~~l~~~--------~~---~~L~I~~~~~~~D~G~Y~C~a~n~~g~~~~ 73 (186)
T 1jbj_A 10 VSISGTSVELTCPLDS-D-ENLKWEKNGQELPQK--------HD---KHLVLQDFSEVEDSGYYVCYTPASNKNTYL 73 (186)
T ss_dssp EEEETTEEEEECSSCC-C-TTCEEEETTEEECSC--------CC---SEEEEESCCTTTSCEEEEEECSSCCCCCCE
T ss_pred EEeCCcEEEEEEeCCC-C-CceEEEECCEECCCC--------CC---CEEEECCCCccccCEEEEEEEEeCCCcEEE
Confidence 3467999999999987 4 359999999988753 12 6899999 9999999999999999887443
No 385
>3mj8_L Stimulatory hamster antibody HL4E10 FAB light CHA; hamster IGG, immune system; 2.94A {Cricetulus migratorius} PDB: 3mj9_L*
Probab=99.16 E-value=4.4e-10 Score=77.48 Aligned_cols=93 Identities=16% Similarity=0.255 Sum_probs=65.3
Q ss_pred CccccCCcceeEecCCcEEEEEeeeeCCCCceEEEeC--CEEec---C-------CCCCceEEcCCCCceeEEEcCCCCC
Q psy2441 113 PQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIRE--MLPVD---T-------SRNPRYNLLTSGAPGALQITNSIEE 180 (212)
Q Consensus 113 p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~--~~~~~---~-------~~~~~~~~~~~~~~~~l~i~~~~~~ 180 (212)
+.+...+ ...+.+|+.+.|.|.+.+.+.+.+.|++. +.... . ....++..........|.|.+++.+
T Consensus 2 ~~v~~~~-~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~ 80 (213)
T 3mj8_L 2 YTLTQPP-LVSVALGQKATITCSGDKLSDVYVHWYQQKAGQAPVLVIYEDNRRPSGIPDHFSGSNSGNMATLTISKAQAG 80 (213)
T ss_dssp CCBBCCS-EEEEETTSCEEEEEECSSTTTSCEEEEEECTTSCCEEEEBTTTBCCTTSCTTEEEEEETTEEEEEESSCCGG
T ss_pred eeEEeCC-cEEEeCCCCEEEEEEcCCCCCceEEEEEECCCCCcEEEEEECCccCCCccCcEEEEecCCEEEEEECCCChh
Confidence 3444455 67789999999999999999999999982 21111 0 0123454333333478999999999
Q ss_pred CCeeEEEEEEcccc--cceecceEEEEe
Q psy2441 181 DQGKYECVAENEVG--TEYSPSTMLYVK 206 (212)
Q Consensus 181 d~g~y~C~a~n~~g--~~~~~~~~l~v~ 206 (212)
|+|.|.|.|.|..| ......+.|.|.
T Consensus 81 D~G~Y~C~~~~~~~~~~~~~~~~~l~V~ 108 (213)
T 3mj8_L 81 DEADYYCQSWDGTNSAWVFGSGTKVTVL 108 (213)
T ss_dssp GCEEEEEEEEETTTTEEEEBCCEEEEEE
T ss_pred hCEEEEEEeccCCcceeEEcCceEEEEe
Confidence 99999999999887 222222677776
No 386
>3s97_C Contactin-1; carbonic anhdyrase like immunoglobulin, cell adhesion comple adhesion; HET: NAG; 2.30A {Homo sapiens}
Probab=99.16 E-value=1.4e-10 Score=78.97 Aligned_cols=80 Identities=24% Similarity=0.346 Sum_probs=62.0
Q ss_pred cCCcceeEecCCcEEEEEe-eeeCCC-CceEEEeCCEEecCCCCCceEEcCCCCceeEEEcCCCCCCCeeEEEEEEcccc
Q psy2441 117 EAPSTKVVEISHTTVLHCS-ASGNPP-PKISWIREMLPVDTSRNPRYNLLTSGAPGALQITNSIEEDQGKYECVAENEVG 194 (212)
Q Consensus 117 ~~~~~~~~~~g~~~~l~C~-~~~~p~-~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~n~~g 194 (212)
..+....+.+|+.+.|.|. +.+.|. +.+.|++++..+......+......+ ..|.|.+++.+|+|.|.|.+.|..+
T Consensus 13 ~~~~~~~v~~G~~v~L~C~~~~~~p~~~~v~W~~~~~~~~~~~~~~~~~~~~~--~~L~i~~v~~~d~G~Y~C~~~~~~~ 90 (201)
T 3s97_C 13 EERPEVRVKEGKGMVLLCDPPYHFPDDLSYRWLLNEFPVFITMDKRRFVSQTN--GNLYIANVEASDKGNYSCFVSSPSI 90 (201)
T ss_dssp SCCCCEEEETTCCEEECCCCCSEESSCCEEEEEESSTTCBCCCSSSEEECTTT--CCEEESSCCGGGCEEEEEEEEEGGG
T ss_pred CCCceEEEECCCCEEEeccccccCCCceEEEEEECCceeeeeeCCCeEEEcCC--CeEEECcCCcccCeEEEEEEEecCC
Confidence 3446678999999999999 889998 99999999877653322333333332 7899999999999999999999766
Q ss_pred ccee
Q psy2441 195 TEYS 198 (212)
Q Consensus 195 ~~~~ 198 (212)
....
T Consensus 91 ~~~~ 94 (201)
T 3s97_C 91 TKSV 94 (201)
T ss_dssp TEEE
T ss_pred Ccch
Confidence 5543
No 387
>3sob_L Antibody light chain; beta propeller, protein binding-immune system complex; 1.90A {Homo sapiens} PDB: 1pkq_A 3u1s_L*
Probab=99.16 E-value=4.5e-10 Score=78.65 Aligned_cols=94 Identities=20% Similarity=0.341 Sum_probs=65.8
Q ss_pred ccccCCcceeEecCCcEEEEEeeeeCCCCceEEEeCC--EEe----------cCCCCCceEEcCCCCceeEEEcCCCCCC
Q psy2441 114 QITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREM--LPV----------DTSRNPRYNLLTSGAPGALQITNSIEED 181 (212)
Q Consensus 114 ~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~--~~~----------~~~~~~~~~~~~~~~~~~l~i~~~~~~d 181 (212)
.+...+....+.+|+++.|.|.+.+.+.+.+.|+++. ... ......++..........|.|.+++.+|
T Consensus 26 ~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D 105 (237)
T 3sob_L 26 QMTQSPSSLSASVGDRVTITCRASQDVSTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSGSGTDFTLTISSLQPED 105 (237)
T ss_dssp CEEEECSEEEEETTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGG
T ss_pred eEEeCCCeEEEeCCCcEEEEEecCCCCCceEEEEEECCCCCCEEEEEeccccCCCCCCcEEEEcCCCEEEEEECCCChhh
Confidence 3444466678899999999999999888999999832 110 0111345554433334789999999999
Q ss_pred CeeEEEEEEcccccceecceEEEEec
Q psy2441 182 QGKYECVAENEVGTEYSPSTMLYVKG 207 (212)
Q Consensus 182 ~g~y~C~a~n~~g~~~~~~~~l~v~~ 207 (212)
+|.|.|.+.|..+........+.|..
T Consensus 106 ~G~Y~C~~~~~~~~~~~~~~~l~V~~ 131 (237)
T 3sob_L 106 FATYYCQQSYTTPPTFGQGTKVEIKR 131 (237)
T ss_dssp CEEEEEEECSSSSCEECCCEEEEEEC
T ss_pred CeEEEEeeccCCceEEcCcEEEEEec
Confidence 99999999987654333335666654
No 388
>2yc1_B Single chain antibody fragment 9004G; immune system-toxin complex, scorpion toxin; 1.90A {Homo sapiens} PDB: 2ybr_B 3lh2_L 3h3p_L 3lhp_L
Probab=99.16 E-value=3.2e-10 Score=73.44 Aligned_cols=97 Identities=21% Similarity=0.263 Sum_probs=63.7
Q ss_pred ccccCCcceeEecCCcEEEEEeeeeCCCCceEEEeCC-----EEec-C------CCCCceEEcCCCCceeEEEcCCCCCC
Q psy2441 114 QITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREM-----LPVD-T------SRNPRYNLLTSGAPGALQITNSIEED 181 (212)
Q Consensus 114 ~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~-----~~~~-~------~~~~~~~~~~~~~~~~l~i~~~~~~d 181 (212)
.+...+....+.+|+++.|.|.+.+.+.+.+.|++.. ..+. . ....|+....+.....|.|.+++.+|
T Consensus 18 ~v~q~p~~v~v~~G~sVtL~C~~s~~~~~~v~Wyrq~~g~~~~~li~~~~~~~~~~~~Rfs~~~~~~~~sL~I~~v~~~D 97 (146)
T 2yc1_B 18 VLTQSPATLSVSPGERATLSCRASQSVRSYLAWYQQKPGQAPRLLFSDASNRATGIPARFTGSGSGTDFTLTISSLEPED 97 (146)
T ss_dssp CEEEECSEEEECTTSCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGG
T ss_pred eEEEeCCEEEEecCCCEEEEEEECCCCCCEEEEEEECCCCCCEEEEEeCCccCCCcCCCeEEecCCCEEEEEECCCCHHH
Confidence 3444566677899999999999987777789999843 1111 0 01245554433334689999999999
Q ss_pred CeeEEEEEEcccccceecceEEEEeccee
Q psy2441 182 QGKYECVAENEVGTEYSPSTMLYVKGTQV 210 (212)
Q Consensus 182 ~g~y~C~a~n~~g~~~~~~~~l~v~~~~~ 210 (212)
+|.|.|.+.+...........|.|....+
T Consensus 98 sG~Y~C~~~~~~~~~fg~GT~L~V~~~~~ 126 (146)
T 2yc1_B 98 FAIYYCQQYRYSPRTFGQGTKVEIKRAAA 126 (146)
T ss_dssp CSEEEEEECSSSSCEECCCEEEEEC----
T ss_pred CEEEEEEEecCCCCeECCCEEEEEeCCcc
Confidence 99999999875332222236777765543
No 389
>1i3g_L Antibody FV fragment; antibiotic; 2.44A {Mus musculus} SCOP: b.1.1.1 PDB: 3iy6_A
Probab=99.16 E-value=2.7e-10 Score=70.45 Aligned_cols=79 Identities=20% Similarity=0.295 Sum_probs=57.0
Q ss_pred ccccCCcceeEecCCcEEEEEeeeeCCCCceEEEeCCE-----Eec-------CCCCCceEEcCCCCceeEEEcCCCCCC
Q psy2441 114 QITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREML-----PVD-------TSRNPRYNLLTSGAPGALQITNSIEED 181 (212)
Q Consensus 114 ~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~-----~~~-------~~~~~~~~~~~~~~~~~l~i~~~~~~d 181 (212)
.+...+....+.+|+++.|.|.+.+.+.+.+.|++... .+. .....++..........|.|.++..+|
T Consensus 6 ~v~q~p~~~~~~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~L~I~~v~~~D 85 (111)
T 1i3g_L 6 VLTQSHKFMSTSVGDRVSITCKASQDVGTAVAWYQQKPGQSPKLLIYWASTRHTGVPDRFTGSGSGTDFTLTISNVQSED 85 (111)
T ss_dssp CEEESCSEEECCTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGG
T ss_pred eEEEeCCEEEEcCCCCEEEEEEeCCCCCCCEEEEEECCCCCCEEEEEECCccCCCCCCcEEEEcCCCEEEEEECCCCHHH
Confidence 34445666778899999999999887778999998531 111 011245554433334689999999999
Q ss_pred CeeEEEEEEcc
Q psy2441 182 QGKYECVAENE 192 (212)
Q Consensus 182 ~g~y~C~a~n~ 192 (212)
+|.|.|.+.+.
T Consensus 86 sG~Y~C~~~~~ 96 (111)
T 1i3g_L 86 LADYFCQQYSS 96 (111)
T ss_dssp CSEEEEEECSS
T ss_pred CEEEEEEEecC
Confidence 99999999875
No 390
>2eo9_A Roundabout homolog 1; beta-sandwich, IG-fold, H-ROBO-1, deleted in U twenty twenty, neurogenesis, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.15 E-value=2.4e-10 Score=71.45 Aligned_cols=69 Identities=32% Similarity=0.562 Sum_probs=53.6
Q ss_pred CCCCeEEeCCCccEEeeCCeEEEEcccCCCCCCcEEEEeCCEEecCCC-------CCeeEEeec--CCCCeEEEeeeC
Q psy2441 27 PGFPQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREMLPVDTSR-------NPRYNLLTS--GAPGTYIKIKPN 95 (212)
Q Consensus 27 ~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~k~g~~l~~~~-------~~~~~~~~~--~~~g~~l~i~~~ 95 (212)
..+|.|...+....+.+|+.+.|.|.+.|.|.+.+.|+|+|..+.... ...+.+... +|.|.|.|...+
T Consensus 6 ~~pP~i~~~p~~~~v~~G~~v~l~C~~~g~p~p~i~W~k~g~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n 83 (118)
T 2eo9_A 6 SGPPVIRQGPVNQTVAVDGTFVLSCVATGSPVPTILWRKDGVLVSTQDSRIKQLENGVLQIRYAKLGDTGRYTCIAST 83 (118)
T ss_dssp CCSCCCSBCCCCEEEETTCEEEEECBCCCSSCCEEEEEESSSBCCTTSTTEEEEETTEEEEESCCGGGCCCEEEEEEC
T ss_pred CCCCEEEcCCCCEEEcCCCeEEEEEEEEecCCCEEEEEECCEECcCCCCeEEEccCCEEEEccCCcCCCEEEEEEEEc
Confidence 467888888889999999999999999999999999999998875421 122333322 378888888776
No 391
>3bfo_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1 (isoform 2); hydrolase, immunoglobulin domain, nucleus, protease; 1.15A {Homo sapiens}
Probab=99.15 E-value=2.7e-10 Score=67.79 Aligned_cols=68 Identities=28% Similarity=0.424 Sum_probs=56.6
Q ss_pred CCCeEEeCCCccEEeeCCeEEEEcccCCCCCCcEEEEeCCEEecCCCCCeeEEeec--CCCCeEEEeeeC
Q psy2441 28 GFPQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREMLPVDTSRNPRYNLLTS--GAPGTYIKIKPN 95 (212)
Q Consensus 28 ~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~k~g~~l~~~~~~~~~~~~~--~~~g~~l~i~~~ 95 (212)
.++.+...|....+.+|+.+.|.|.+.+.|.+.+.|+|+|..+.......+.+... .|.|.|.|...+
T Consensus 2 ~~~~i~~~p~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n 71 (91)
T 3bfo_A 2 SKLQICVEPTSQKLMPGSTLVLQCVAVGSPIPHYQWFKNELPLTHETKKLYMVPYVDLEHQGTYWCHVYN 71 (91)
T ss_dssp CCCEEEECCCCEEECTTSCEEEECEEECSSCCEEEEEETTEECTTCCSSEEEESSCCGGGCEEEEEEEEC
T ss_pred CceEEEECCCccEecCCCcEEEEEEeccCCCCEEEEEcCCeeCCcCCCCeEEECCCCHHhCEEEEEEEEc
Confidence 46778888989999999999999999999999999999999987764455555544 478899998776
No 392
>3u1s_H FAB PGT145 heavy chain; IGG, broadly neutralizing antibody, HIV-1 GP120, immune SYST; HET: TYS; 2.30A {Homo sapiens}
Probab=99.15 E-value=1.4e-10 Score=82.98 Aligned_cols=72 Identities=18% Similarity=0.283 Sum_probs=45.0
Q ss_pred ecCCcEEEEEeeee-CC-CCceEEEeCCEEecCC-CCCceEEcCCCC---ceeEEEcCCCCCCCeeEEEEEEccccccee
Q psy2441 125 EISHTTVLHCSASG-NP-PPKISWIREMLPVDTS-RNPRYNLLTSGA---PGALQITNSIEEDQGKYECVAENEVGTEYS 198 (212)
Q Consensus 125 ~~g~~~~l~C~~~~-~p-~~~i~W~~~~~~~~~~-~~~~~~~~~~~~---~~~l~i~~~~~~d~g~y~C~a~n~~g~~~~ 198 (212)
..|+.+.|.|.+.+ .| .+.+.| ++..+... .........++. .+.|.|.....+| +.|+|.+.|..+....
T Consensus 181 ~~g~~~~l~C~~~~~~p~~~~v~W--~~~~~~~~~~~~~~~~~~~g~y~~~s~L~i~~~~~~~-~~ytC~v~h~~~~~~~ 257 (267)
T 3u1s_H 181 TSGGTAALGCLVKDYFPEPVTVSW--NSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKV 257 (267)
T ss_dssp EETTEEEEEEEEEEEBSSCCEEEE--GGGTBCTTEEECCCEECTTSCEEEEEEEEEEGGGGGT-CCCEEEEEEGGGTEEE
T ss_pred CCCCcEEEEEEEeEEECCCeEEEE--CCcccCCCEEeCCceECCCCCEEEEEEEEECchhcCC-CEEEEEEEECCCCcce
Confidence 46899999999977 45 458899 44333221 000000111111 2568888888888 9999999998765543
Q ss_pred c
Q psy2441 199 P 199 (212)
Q Consensus 199 ~ 199 (212)
.
T Consensus 258 ~ 258 (267)
T 3u1s_H 258 D 258 (267)
T ss_dssp E
T ss_pred E
Confidence 3
No 393
>1waa_A Titin; metal binding protein, calmodulin-binding, cytoskeleton, immunoglobulin domain, muscle protein, phosphorylation, repeat; 1.80A {Homo sapiens} PDB: 1waa_E 1waa_F 1tit_A 1tiu_A 2rq8_A
Probab=99.14 E-value=4.3e-10 Score=67.18 Aligned_cols=74 Identities=12% Similarity=0.137 Sum_probs=56.4
Q ss_pred CCCeEEeCCCccEEeeCCeEEEEcccCCCCCCcEEEEeCCEEecCCCCCeeEEeecCCCCeEEEeeeCCccceeEEee
Q psy2441 28 GFPQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREMLPVDTSRNPRYNLLTSGAPGTYIKIKPNLFSPLSVYSA 105 (212)
Q Consensus 28 ~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~k~g~~l~~~~~~~~~~~~~~~~g~~l~i~~~~~~~~~v~~~ 105 (212)
.+|.|...+.+..+.+|+.+.|.|.+.+ +++.+.|||||.+|... .++.+... +....|.|.++...+...|.+
T Consensus 4 ~~~~~~~~~~~~~v~~G~~v~l~C~v~~-~~~~v~W~k~g~~i~~~--~~~~i~~~-g~~~~L~I~~v~~~D~G~Y~C 77 (93)
T 1waa_A 4 ALIEVEKPLYGVEVFVGETAHFEIELSE-PDVHGQWKLKGQPLAAS--PDCEIIED-GKKHILILHNCQLGMTGEVSF 77 (93)
T ss_dssp CCCCEEECCCCEEEETTSCEEEEEEESS-SSCCCEEEETTEECCCB--TTEEEEEE-TTEEEEEECSCCGGGCEEEEE
T ss_pred CCcEeeccCcceEEeCCCCEEEEEEECC-CCCeEEEEECCEECcCC--CCEEEEEE-CCEEEEEECCCChhhCEEEEE
Confidence 5788889999999999999999999976 45789999999999875 66666543 333456666665555555554
No 394
>1gsm_A Madcam-1, mucosal addressin cell adhesion molecule-1; cell adhesion protein, immunoglobulin fold, I-SET fold, cell adhesion glycoprotein; 1.9A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1bqs_A*
Probab=99.14 E-value=2.9e-10 Score=78.00 Aligned_cols=79 Identities=16% Similarity=0.154 Sum_probs=60.9
Q ss_pred eeEecCCcEEEEEeeeeCCCC--ceEEEeCCEEecCCCCCceEEcCCCCceeEEEcCCCCCCCeeEEEEEEcccccceec
Q psy2441 122 KVVEISHTTVLHCSASGNPPP--KISWIREMLPVDTSRNPRYNLLTSGAPGALQITNSIEEDQGKYECVAENEVGTEYSP 199 (212)
Q Consensus 122 ~~~~~g~~~~l~C~~~~~p~~--~i~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~n~~g~~~~~ 199 (212)
..+..|+++.|.|.+ +.|.| .|.|++.+..+ .+...... ...|.|.+++.+|.|.|.|.|.|..|.....
T Consensus 17 v~v~~G~sv~L~C~a-~~p~P~~~i~W~~~~~~l-----~~~~~~~~--~~~L~I~~v~~~d~G~Y~C~a~n~~~~~~~~ 88 (210)
T 1gsm_A 17 VAVALGASRQLTCRL-ACADRGASVQWRGLDTSL-----GAVQSDTG--RSVLTVRNASLSAAGTRVCVGSCGGRTFQHT 88 (210)
T ss_dssp EEEETTCCEEEEEEE-CCSSTTCEEEEESSTTTT-----CCEEEESS--EEEEEECSCCGGGCEEEEEEEEETTEEEEEE
T ss_pred eEEeCCCCEEEEEEC-CCCCCCcceEEeeccccc-----CcEEecCC--ccEEEECccCcccCceEEEEEEeCCCceEEE
Confidence 578899999999999 88888 99999854332 12222222 2789999999999999999999988776555
Q ss_pred ceEEEEecce
Q psy2441 200 STMLYVKGTQ 209 (212)
Q Consensus 200 ~~~l~v~~~~ 209 (212)
+.|.|...+
T Consensus 89 -~~ltV~~~P 97 (210)
T 1gsm_A 89 -VQLLVYAFP 97 (210)
T ss_dssp -EEEEEEBCC
T ss_pred -EEEEEEecC
Confidence 777776543
No 395
>2oyp_A Hepatitis A virus cellular receptor 2; TIM-3, T-cell immunoglobulin mucin, signaling protein; 1.95A {Mus musculus} PDB: 3kaa_A*
Probab=99.14 E-value=2e-10 Score=70.66 Aligned_cols=85 Identities=21% Similarity=0.270 Sum_probs=58.0
Q ss_pred eeEecCCcEEEEEeeeeCCC---CceEEEeCCEEe--------c-C------CCCCceEEcCC--CCceeEEEcCCCCCC
Q psy2441 122 KVVEISHTTVLHCSASGNPP---PKISWIREMLPV--------D-T------SRNPRYNLLTS--GAPGALQITNSIEED 181 (212)
Q Consensus 122 ~~~~~g~~~~l~C~~~~~p~---~~i~W~~~~~~~--------~-~------~~~~~~~~~~~--~~~~~l~i~~~~~~d 181 (212)
..+.+|+++.|.|.+.+.+. ..+.|+++.... . . ....++.+..+ ....+|.|.+++.+|
T Consensus 4 v~~~~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~g~~~~~~~~~r~~~~~~~~~~~~sL~I~~v~~~D 83 (109)
T 2oyp_A 4 YKVEVGKNAYLPCSYTLPTSGTLVPMCWGKGFCPWSQCTNELLRTDERNVTYQKSSRYQLKGDLNKGDVSLIIKNVTLDD 83 (109)
T ss_dssp EEECTTSCEEECCBCCCCTTCCCCCEEEESSSCCSSSCSSEEEEECSSSEEEESCTTEEECSCGGGTBCCEEECSCCGGG
T ss_pred EEEEcCCCEEEEEEeECCCCCCeEEEEEEecCCCCCCceeEEEEcCCcCccccccceEEEccCccCCcEeEEEccCCChh
Confidence 45778999999999876543 349999865321 0 0 01234444322 123689999999999
Q ss_pred CeeEEEEEEcccccceecceEEEEec
Q psy2441 182 QGKYECVAENEVGTEYSPSTMLYVKG 207 (212)
Q Consensus 182 ~g~y~C~a~n~~g~~~~~~~~l~v~~ 207 (212)
+|.|.|.+.+..+..... +.|.|.+
T Consensus 84 ~G~Y~C~v~~~~~~~~~~-~~l~V~V 108 (109)
T 2oyp_A 84 HGTYCCRIQFPGLMNDKK-LELKLDI 108 (109)
T ss_dssp CEEEEEEECCSSTTCCEE-EEEEEEE
T ss_pred CeEEEEEEEcCCcccceE-EEEEEEe
Confidence 999999999987655544 6666654
No 396
>4gos_A V-SET domain-containing T-cell activation inhibit; immunoglobulin domain, glycoprotein, disulfide bond, immunit adaptive immunity; HET: NAG BMA MAN; 1.59A {Homo sapiens}
Probab=99.14 E-value=8e-10 Score=69.81 Aligned_cols=88 Identities=16% Similarity=0.243 Sum_probs=59.2
Q ss_pred cCCcceeEecCCcEEEEEeeeeCCC---CceEEEeCCEEe-----------cCC----CCCceEEcCCC---CceeEEEc
Q psy2441 117 EAPSTKVVEISHTTVLHCSASGNPP---PKISWIREMLPV-----------DTS----RNPRYNLLTSG---APGALQIT 175 (212)
Q Consensus 117 ~~~~~~~~~~g~~~~l~C~~~~~p~---~~i~W~~~~~~~-----------~~~----~~~~~~~~~~~---~~~~l~i~ 175 (212)
..........|+++.|.|.....+. ..+.|++++... ... ...|+.+..+. +..+|.|.
T Consensus 10 ~~~~~v~g~vG~~v~L~C~~~~~~~~~~~~V~W~k~~~~~~v~~~~~g~~~~~~~~~~~~~R~~~~~~~~~~g~~sL~I~ 89 (125)
T 4gos_A 10 VTTVASAGNIGEDGILSCTFEPDIKLSDIVIQWLKEGVLGLVHEFKEGKDELSEQDEMFRGRTAVFADQVIVGNASLRLK 89 (125)
T ss_dssp EEEECEEEETTSCEEEEEEECCCSCGGGCEEEEEETTCSSBSEEEETTEECCTTBCGGGTTCEEECTTTGGGTBCCEEES
T ss_pred ccCceEEEeCCCCEEEEEEEcCCcccCcEEEEEEEeccCceEEEEEeecccccccCccccceEEEecCCccCCeEEEEEC
Confidence 3444456778999999999865433 368999864211 100 12344443332 23689999
Q ss_pred CCCCCCCeeEEEEEEcccccceecceEEEE
Q psy2441 176 NSIEEDQGKYECVAENEVGTEYSPSTMLYV 205 (212)
Q Consensus 176 ~~~~~d~g~y~C~a~n~~g~~~~~~~~l~v 205 (212)
+++.+|+|.|.|.+.|..|..... +.|.|
T Consensus 90 ~v~~~D~G~Y~C~v~~~~g~~~~~-v~LkV 118 (125)
T 4gos_A 90 NVQLTDAGTYKCYIITSKGKGNAN-LEYKT 118 (125)
T ss_dssp SCCGGGCEEEEEEEEETTEEEEEE-EEEEE
T ss_pred CCChHHCEEEEEEEEeCCCeEEEE-EEEEE
Confidence 999999999999999988877655 55544
No 397
>3bkj_L WO2 IGG2A FAB fragment light chain kappa; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} PDB: 3bkc_L 3bkm_L 2zuq_B* 1h3p_L
Probab=99.14 E-value=3.4e-10 Score=80.21 Aligned_cols=94 Identities=21% Similarity=0.307 Sum_probs=65.1
Q ss_pred ccccCCcceeEecCCcEEEEEeeeeCC-----CCceEEEeCCE--Ee----------cCCCCCceEEcCCCCceeEEEcC
Q psy2441 114 QITEAPSTKVVEISHTTVLHCSASGNP-----PPKISWIREML--PV----------DTSRNPRYNLLTSGAPGALQITN 176 (212)
Q Consensus 114 ~~~~~~~~~~~~~g~~~~l~C~~~~~p-----~~~i~W~~~~~--~~----------~~~~~~~~~~~~~~~~~~l~i~~ 176 (212)
.+...+....+.+|+.+.|.|.+.+.+ .+.+.|++++. .. ......++....++...+|.|.+
T Consensus 36 ~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~ 115 (252)
T 3bkj_L 36 LMTQTPLSLPVNLGEQASISCRSSQSIVHSNGHTYLEWYLQRPGQSPKLLIYQVSTRFSGVPDRFSGSGSGTDFTLRISR 115 (252)
T ss_dssp CEEEECSEEEECTTSCEEEEEEESSCCBCTTSCBCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESS
T ss_pred EEEeCCceEEEeCCCcEEEEEEcCCCccccCCCCcEEEEEECCCCCcEEEEEcCCcccCCcCCceEEEccCCEEEEEECC
Confidence 344446667788999999999998887 58999998541 11 01112455444333346899999
Q ss_pred CCCCCCeeEEEEEEcccccceecceEEEEec
Q psy2441 177 SIEEDQGKYECVAENEVGTEYSPSTMLYVKG 207 (212)
Q Consensus 177 ~~~~d~g~y~C~a~n~~g~~~~~~~~l~v~~ 207 (212)
++.+|+|.|.|.+.|..+........|.|..
T Consensus 116 v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~ 146 (252)
T 3bkj_L 116 VEAEDLGVYYCFQASLVPLTFGAGTKLELKR 146 (252)
T ss_dssp CCGGGCEEEEEEECSBSSCEECCCEEEEECC
T ss_pred CCcccCEEEEEEEEcCCccEECCCEEEEEeC
Confidence 9999999999999987654333325666654
No 398
>1f2q_A High affinity immunoglobulin epsilon receptor ALP subunit; immunoglobulin fold, glycoprotein, IGE-binding Pro immune system; HET: NAG MAN; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1j86_A* 1rpq_A* 2y7q_A* 1f6a_A* 1j88_A* 1j89_A* 1j87_A*
Probab=99.14 E-value=1.3e-10 Score=77.80 Aligned_cols=79 Identities=22% Similarity=0.374 Sum_probs=62.4
Q ss_pred CccccCCcceeEecCCcEEEEEeeeeCCCC-ceEEEeCCEEecCCCCCceEEcCCCCceeEEEcCCCCCCCeeEEEEEEc
Q psy2441 113 PQITEAPSTKVVEISHTTVLHCSASGNPPP-KISWIREMLPVDTSRNPRYNLLTSGAPGALQITNSIEEDQGKYECVAEN 191 (212)
Q Consensus 113 p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~-~i~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~n 191 (212)
|.+...+....+.+|+.+.|.|.+.+.+.+ .+.|++++..+... + ..|.|.+++.+|+|.|.|.+.|
T Consensus 5 P~i~~~p~~~~v~~G~~v~L~C~~~~~~~~~~i~W~~~~~~~~~~---------~---~~L~i~~v~~~d~G~Y~C~~~~ 72 (176)
T 1f2q_A 5 PKVSLNPPWNRIFKGENVTLTCNGNNFFEVSSTKWFHNGSLSEET---------N---SSLNIVNAKFEDSGEYKCQHQQ 72 (176)
T ss_dssp CCCEEESSCSEEETTCCEEEECCTTCC----CCEEEETTEECSCC---------S---SEEEECSCCGGGCEEEEEECTT
T ss_pred CEEEcCCCCcceecCCcEEEEEeCCCCCCcceEEEEECCeECCCC---------c---eEEEEeccceecCEEEEEEcCC
Confidence 677777777789999999999999988875 79999999876542 1 7899999999999999999998
Q ss_pred ccccceecceEEEEe
Q psy2441 192 EVGTEYSPSTMLYVK 206 (212)
Q Consensus 192 ~~g~~~~~~~~l~v~ 206 (212)
..++. . +.|.|.
T Consensus 73 ~~~s~--~-~~l~V~ 84 (176)
T 1f2q_A 73 VNESE--P-VYLEVF 84 (176)
T ss_dssp SSCCC--C-EEEEEE
T ss_pred ccccc--c-EEEEEe
Confidence 66543 2 566665
No 399
>3esu_F Antibody 14B7* light chain and antibody 14B7* heavy chain linked with A synthetic...; single-chain FV, monoclonal antibody, immunoglobulin; 1.30A {Mus musculus} PDB: 3et9_F 3esv_F 3etb_F 1h8n_A 1h8s_A* 1h8o_A*
Probab=99.13 E-value=6.1e-10 Score=78.74 Aligned_cols=94 Identities=20% Similarity=0.337 Sum_probs=66.2
Q ss_pred ccccCCcceeEecCCcEEEEEeeeeCCCCceEEEeCCE-----Ee-------cCCCCCceEEcCCCCceeEEEcCCCCCC
Q psy2441 114 QITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREML-----PV-------DTSRNPRYNLLTSGAPGALQITNSIEED 181 (212)
Q Consensus 114 ~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~-----~~-------~~~~~~~~~~~~~~~~~~l~i~~~~~~d 181 (212)
.+...+....+.+|+.+.|.|.+.+.|.+.+.|+++.. .+ ......++.........+|.|.++..+|
T Consensus 6 ~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~i~W~k~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D 85 (250)
T 3esu_F 6 VLIQSTSSLSASLGDRVTISCRASQDIRNYLNWYQQKPDGTVKLLIYYTSRLQSGVPSRFSGSGSGTDYSLTISNLEQED 85 (250)
T ss_dssp CEECSCSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGG
T ss_pred eEEecCCEEEeeCCCcEEEEEEecccCCceEEEEEECCCCCCEEEEEEeCCCCCCCCCCEEEeCCCCEEEEEEccCChhh
Confidence 44455666778899999999999999999999998431 10 0111244544333334689999999999
Q ss_pred CeeEEEEEEcccccceecceEEEEec
Q psy2441 182 QGKYECVAENEVGTEYSPSTMLYVKG 207 (212)
Q Consensus 182 ~g~y~C~a~n~~g~~~~~~~~l~v~~ 207 (212)
+|.|.|.+.|..+........|.|..
T Consensus 86 ~G~Y~C~~~n~~~~~~~~~~~l~V~~ 111 (250)
T 3esu_F 86 IGTYFCQQGNTLPWTFGGGTKLEIRR 111 (250)
T ss_dssp CEEEEEEECSSSSCEECCCEEEEEC-
T ss_pred CEEEEEEEeeCCCceECCCEEEEEEC
Confidence 99999999997665444335666655
No 400
>2if7_A SLAM family member 6; NTB-A, homophilic receptor, immune system; 3.00A {Homo sapiens}
Probab=99.13 E-value=1.9e-10 Score=78.31 Aligned_cols=87 Identities=18% Similarity=0.228 Sum_probs=64.3
Q ss_pred CCcceeEecCCcEEEEEeeee-CCCCceEEEeCCEEec---CCC-------------CCceEEcCCCCceeEEEcCCCCC
Q psy2441 118 APSTKVVEISHTTVLHCSASG-NPPPKISWIREMLPVD---TSR-------------NPRYNLLTSGAPGALQITNSIEE 180 (212)
Q Consensus 118 ~~~~~~~~~g~~~~l~C~~~~-~p~~~i~W~~~~~~~~---~~~-------------~~~~~~~~~~~~~~l~i~~~~~~ 180 (212)
.+....+.+|+++.|.|.+.+ .+.+.+.|++++..+. ... ..|+.+..+ .+|.|.+++.+
T Consensus 4 ~p~~v~~~~G~~v~L~C~~~~~~~~~~v~W~~~~~~i~~~~~~~~~~~~~~~~~~~~~~R~~~~~~---~sL~I~~v~~~ 80 (193)
T 2if7_A 4 TPLMVNGILGESVTLPLEFPAGEKVNFITWLFNETSLAFIVPHETKSPEIHVTNPKQGKRLNFTQS---YSLQLSNLKME 80 (193)
T ss_dssp CCEEEEEETTSCEEECCCCCCCSCCCEEEEEETTEEEEEEECCSSSCCEEEECCHHHHTTEEECTT---CCEEECSCCGG
T ss_pred CCeEEEEEecCeEEEeccCCCcccccEEEEEECCEEEEEEecccCCCCceeecCccccccEEECCC---eEEEECCCCcc
Confidence 344567889999999999875 4557999999876542 100 124444433 78999999999
Q ss_pred CCeeEEEEEEcccccceecceEEEEecc
Q psy2441 181 DQGKYECVAENEVGTEYSPSTMLYVKGT 208 (212)
Q Consensus 181 d~g~y~C~a~n~~g~~~~~~~~l~v~~~ 208 (212)
|+|.|.|.+.|..|..... +.|.|.+.
T Consensus 81 D~G~Y~C~~~~~~~~~~~~-~~L~V~~~ 107 (193)
T 2if7_A 81 DTGSYRAQISTKTSAKLSS-YTLRILRQ 107 (193)
T ss_dssp GCEEEEEEEECSSCEEEEE-EEEEEECC
T ss_pred cCceEEEEEEecCCCeEEE-EEEEEEcc
Confidence 9999999999988876554 77777653
No 401
>4ffy_L DENV1-E111 single chain variable fragment (light; viral envelope proteins, structural genomics, antibody epito flavivirus, niaid; 2.50A {Mus musculus}
Probab=99.13 E-value=3.8e-10 Score=71.42 Aligned_cols=94 Identities=23% Similarity=0.381 Sum_probs=63.5
Q ss_pred cccCCcceeEecCCcEEEEEeeeeCC----CCceEEEeCC--EEec----------CCCCCceEEcCCCCceeEEEcCCC
Q psy2441 115 ITEAPSTKVVEISHTTVLHCSASGNP----PPKISWIREM--LPVD----------TSRNPRYNLLTSGAPGALQITNSI 178 (212)
Q Consensus 115 ~~~~~~~~~~~~g~~~~l~C~~~~~p----~~~i~W~~~~--~~~~----------~~~~~~~~~~~~~~~~~l~i~~~~ 178 (212)
+...+....+.+|+.+.|.|.+.+.+ .+.+.|++.. .... .....++..........|.|.++.
T Consensus 4 v~q~p~~v~v~~G~~v~L~C~~~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~sL~I~~v~ 83 (126)
T 4ffy_L 4 LTQSPASLAVSLGQRATISCRASESVDHYGNSFIYWYQQKPGQPPKLLIYLASNLESGVPARFSGSGSETDFTLTIDSVE 83 (126)
T ss_dssp EEEECSEEEEETTSCEEEEEEESSCCEETTEECEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCC
T ss_pred EEeCCCeEEEeCCCCEEEEEecCCCcccCCCceEEEEEECCCCCCEEEEEEcCccCCCCCCcEEEecCCCEEEEEECCCC
Confidence 34455667789999999999998776 5689999842 1110 011245544433335789999999
Q ss_pred CCCCeeEEEEEEcccccceecceEEEEecc
Q psy2441 179 EEDQGKYECVAENEVGTEYSPSTMLYVKGT 208 (212)
Q Consensus 179 ~~d~g~y~C~a~n~~g~~~~~~~~l~v~~~ 208 (212)
.+|+|.|.|.+.+...........|.|+..
T Consensus 84 ~~DsG~Y~C~~~~~~~~~fg~gT~L~V~~~ 113 (126)
T 4ffy_L 84 TDDAATYYCQQNNEDPYTFGGGTKLEIKGG 113 (126)
T ss_dssp GGGCEEEEEEECSSSSCEECCCEEEEEEC-
T ss_pred HHHCEEEEEEEecCCCcEECCCEEEEEecC
Confidence 999999999998864433333366777653
No 402
>2or8_A Hepatitis A virus cellular receptor 1 homolog; beta barrel, immunoglobulin fold, IGV domain, TIM, immune system; 2.50A {Mus musculus}
Probab=99.13 E-value=2.5e-10 Score=71.13 Aligned_cols=90 Identities=24% Similarity=0.286 Sum_probs=58.3
Q ss_pred CcceeEecCCcEEEEEeeee-CCCCceEEEeCCEE--------ecC-------CCCCceEEcCC--CCceeEEEcCCCCC
Q psy2441 119 PSTKVVEISHTTVLHCSASG-NPPPKISWIREMLP--------VDT-------SRNPRYNLLTS--GAPGALQITNSIEE 180 (212)
Q Consensus 119 ~~~~~~~~g~~~~l~C~~~~-~p~~~i~W~~~~~~--------~~~-------~~~~~~~~~~~--~~~~~l~i~~~~~~ 180 (212)
+....+.+|+++.|.|.... .....+.|++.... +.. ....++....+ ....+|.|.+++.+
T Consensus 4 ~~~v~~~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~sL~I~~v~~~ 83 (116)
T 2or8_A 4 YVEVKGVVGHPVTLPCTYSTYRGITTTCWGRGQCPSSACQNTLIWTNGHRVTYQKSSRYNLKGHISEGDVSLTIENSVES 83 (116)
T ss_dssp CEEEEEETTSCEEECCBCCCTTCCCCEEEEESCCCSSSCTTEEEEECSSSEEEESSTTEECCSCGGGTBCCEEESSCCGG
T ss_pred cceEEEEeCCcEEEEEEeeCCCCCcEEEEEEECCCCCCceEEEEEeCCcccCcCCCCeEEEecCCCCCeEEEEECCCCcc
Confidence 34567889999999999865 34568999997521 000 01244443221 22468999999999
Q ss_pred CCeeEEEEEEcccccceecceEEEEecce
Q psy2441 181 DQGKYECVAENEVGTEYSPSTMLYVKGTQ 209 (212)
Q Consensus 181 d~g~y~C~a~n~~g~~~~~~~~l~v~~~~ 209 (212)
|+|.|.|.+.+..+..... ..+.+.+.+
T Consensus 84 DsG~Y~C~v~~~~~~~~~~-~~~~l~V~p 111 (116)
T 2or8_A 84 DSGLYCCRVEIPGWFNDQK-VTFSLQVKP 111 (116)
T ss_dssp GCEEEEEEECCSSTTCCEE-EEEEEEEEC
T ss_pred cCEEEEEEEEcCCcccccE-EEEEEEECC
Confidence 9999999998865443222 444444443
No 403
>2znx_A SCFV; fluorotryptohpan, 5-fluorotryptophan, 19F, single chain FV, allergen, antimicrobial, bacteriolytic enzyme, glycosidase, hydrolase; HET: FTR 1PG; 2.30A {Homo sapiens} PDB: 2znw_A*
Probab=99.12 E-value=2.9e-10 Score=80.16 Aligned_cols=94 Identities=23% Similarity=0.300 Sum_probs=64.4
Q ss_pred cccCCcceeEecCCcEEEEEeeeeCCCCceEEEeCC--EE---ec-------CCCCCceEEcCCCCceeEEEcCCCCCCC
Q psy2441 115 ITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREM--LP---VD-------TSRNPRYNLLTSGAPGALQITNSIEEDQ 182 (212)
Q Consensus 115 ~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~--~~---~~-------~~~~~~~~~~~~~~~~~l~i~~~~~~d~ 182 (212)
+...+....+.+|+++.|.|.+.+.|.+.+.|+++. .. +. .....++....+....+|.|.+++.+|+
T Consensus 4 v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~ 83 (242)
T 2znx_A 4 LTQSPATLSVTPGNSVSLSCRASQSIGNNLHXYQQKSHESPRLLIKYASQSISGIPSRFSGSGSGTDFTLSINSVETEDF 83 (242)
T ss_dssp EEEECSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGGGC
T ss_pred EEEcCCeEEEcCCCcEEEEEEeCCCCCceEEEEEeCCCCCceEEEEeccccCCCCCCCEEEecCCCEEEEEECCCChHHC
Confidence 344566677889999999999999988999999853 11 10 0012455444333346899999999999
Q ss_pred eeEEEEEEcccccceecceEEEEecc
Q psy2441 183 GKYECVAENEVGTEYSPSTMLYVKGT 208 (212)
Q Consensus 183 g~y~C~a~n~~g~~~~~~~~l~v~~~ 208 (212)
|.|.|.+.|..+........|.|...
T Consensus 84 G~Y~C~~~n~~~~~~~~~~~L~V~~~ 109 (242)
T 2znx_A 84 GMYFCQQSNSXPYTFGGGTKLEITGG 109 (242)
T ss_dssp EEEEEEECSSSSCEECCCEEEEEC--
T ss_pred EEEEEeEecCCceEECCCEEEEEcCC
Confidence 99999999975543222256666553
No 404
>1hxm_A Gamma-delta T-cell receptor; IG domain, TCR, GDTCR, immune system; 3.12A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=99.12 E-value=1.1e-09 Score=76.59 Aligned_cols=152 Identities=18% Similarity=0.251 Sum_probs=83.4
Q ss_pred EEeCCCccEEeeCCeEEEEcccCCCC--CCcEEEEeCC-----EEec-------CCCCCeeEEeec--------------
Q psy2441 32 ITEAPSTKVVEISHTTVLHCSASGNP--PPKISWIREM-----LPVD-------TSRNPRYNLLTS-------------- 83 (212)
Q Consensus 32 ~~~~~~~~~v~~g~~v~l~C~~~~~p--~~~v~W~k~g-----~~l~-------~~~~~~~~~~~~-------------- 83 (212)
+...|..+.+.+|+.++|.|.+.+.+ ...+.|||.. ..|. .....|+.+...
T Consensus 4 v~q~p~~v~v~~G~~vtL~C~~s~~~~~~~~v~W~rq~~g~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~ 83 (229)
T 1hxm_A 4 LVPEHQTVPVSIGVPATLRCSMKGEAIGNYYINWYRKTQGNTMTFIYREKDIYGPGFKDNFQGDIDIAKNLAVLKILAPS 83 (229)
T ss_dssp EEESCSEEEEETTCCEEEEEEECSSCGGGSEEEEEEEESSSCSEEEEETTTEECTTTTTTEEEEEEGGGTEEEEEESSCC
T ss_pred cEeCCCEEEEcCCCCEEEEeEecCCccCcceEEEEEECCCCCcEEEEEcCCccCCCcCCeEEEEEcCCCCEEEEEECcCC
Confidence 45667788999999999999997644 3579999852 1221 111356665431
Q ss_pred -CCCCeEEEeeeCCc--------------cceeEEeecCCCCCCCccccCCcceeEecCCcEEEEEeeeeC-CCC-ceEE
Q psy2441 84 -GAPGTYIKIKPNLF--------------SPLSVYSADKIPPGFPQITEAPSTKVVEISHTTVLHCSASGN-PPP-KISW 146 (212)
Q Consensus 84 -~~~g~~l~i~~~~~--------------~~~~v~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~-p~~-~i~W 146 (212)
+|.|.|.|...... ..+.|..... ....|.+ .+. +....|.|.+.+. |.+ .+.|
T Consensus 84 ~~Dsg~Y~C~~~~~~~~~~~~~~~~~g~gt~L~V~~~~~-~~~~P~v-------~~~-~~~~~L~C~~~g~~P~~i~v~W 154 (229)
T 1hxm_A 84 ERDEGSYYCACDTLGMGGEYTDKLIFGKGTRVTVEPRSQ-PHTKPSV-------FVM-KNGTNVACLVKEFYPKDIRINL 154 (229)
T ss_dssp GGGCEEEEEEEECCCCSSSCCCCCEEBCCEEEEEECCSC-CCBCCEE-------EEE-EETTEEEEEEESCBSSCCEEEE
T ss_pred HhHCeEEEEEEecCCCcccccchhhcCccEEEEEeccCC-CCcCCcE-------EEc-CCCCeEEEEEEEEeCCCEEEEE
Confidence 25555665543321 1122221000 0001111 111 1235899999875 444 8999
Q ss_pred EeCCEEecCCCCCceEEcCCCCceeEEEcCCC-CCCCeeEEEEEEcccccce
Q psy2441 147 IREMLPVDTSRNPRYNLLTSGAPGALQITNSI-EEDQGKYECVAENEVGTEY 197 (212)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~-~~d~g~y~C~a~n~~g~~~ 197 (212)
+++ ..+... ........+ +.+.+.... ..+.+.|+|.+.|..+...
T Consensus 155 ~~~-~~~~~~-~~~~~~~~d---g~y~~~~~~~~~~~~~ytC~V~h~~~~~~ 201 (229)
T 1hxm_A 155 VSS-KKITEF-DPAIVISPS---GKYNAVKLGKYEDSNSVTCSVQHDNKTVH 201 (229)
T ss_dssp ECS-SEEEEC-CCEEEECTT---SSEEEEEEEEETTTTTCEEEEEETTEEEE
T ss_pred ecC-CEEecC-ccceEECCC---CcEEEEECcccCCCCcEEEEEEeCCCCcc
Confidence 999 665432 122222222 334443332 3678999999999765443
No 405
>1h5b_A Murine T cell receptor (TCR) valpha domain; immune response, immunoglobulin fold; 1.85A {Mus musculus} SCOP: b.1.1.1 PDB: 1h5b_C 1h5b_B
Probab=99.12 E-value=5.3e-10 Score=69.34 Aligned_cols=76 Identities=25% Similarity=0.405 Sum_probs=54.7
Q ss_pred CCcceeEecCCcEEEEEeeeeCCCCceEEEeCC--EEec--------CCCCCceEEcCC---CCceeEEEcCCCCCCCee
Q psy2441 118 APSTKVVEISHTTVLHCSASGNPPPKISWIREM--LPVD--------TSRNPRYNLLTS---GAPGALQITNSIEEDQGK 184 (212)
Q Consensus 118 ~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~--~~~~--------~~~~~~~~~~~~---~~~~~l~i~~~~~~d~g~ 184 (212)
.+....+.+|+++.|.|.+.+.+ +.+.|++.. .... .....++....+ ....+|.|.+++.+|+|.
T Consensus 7 ~p~~~~v~~G~~v~L~C~~~~~~-~~v~W~r~~~~~~~~~l~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~DsG~ 85 (113)
T 1h5b_A 7 SPSALSLHEGTDSALRCNFTTTM-RSVQWFRQNSRGSLISLFYLASGTKENGRLKSAFDSERARYSTLHIRDAQLEDSGT 85 (113)
T ss_dssp ECSEEEEETTCCEEEEEEESSCC-SEEEEEEECTTSCEEEEEEESSSEEEETTEEEECCSSSSSEEEEEECSCCGGGCEE
T ss_pred CCCEEEEecCCcEEEEEEECCCC-ceEEEEEECCCCCeEEEEEECCCCccCCceEEEEccCCCCEEEEEECCCChhhCEE
Confidence 45556788999999999998755 689999853 1111 001245554432 234689999999999999
Q ss_pred EEEEEEcccc
Q psy2441 185 YECVAENEVG 194 (212)
Q Consensus 185 y~C~a~n~~g 194 (212)
|.|.+.|..|
T Consensus 86 Y~C~~~n~~~ 95 (113)
T 1h5b_A 86 YFCAAEASSG 95 (113)
T ss_dssp EEEEEECSSS
T ss_pred EEEEEecCCC
Confidence 9999999765
No 406
>1b6u_A KIR2DL3, P58 killer cell inhibitory receptor; natural killer cell, HLA, major histocompatibility complex class I (MHC class I); 3.00A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.11 E-value=2.2e-10 Score=81.56 Aligned_cols=140 Identities=20% Similarity=0.161 Sum_probs=63.6
Q ss_pred ceeeEEEeeccCCC----cceecccccC---CCCCeEEeCCCccEEeeCCeEEEEcccCCCCCCcEEEEeCCEEecCC--
Q psy2441 3 IGTYIKIKPNLFSP----LSVYSADKIP---PGFPQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREMLPVDTS-- 73 (212)
Q Consensus 3 ~g~Y~C~~~~~~~~----~~~~~~~~~~---~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~k~g~~l~~~-- 73 (212)
+|.|+|.+.+.... .......+.+ ..+|.+...+. ..+.+|+.++|.|.+.+. .+.+.|+|+|..+...
T Consensus 74 sG~Y~C~a~~~~~~~~~s~~S~~~~L~V~~~~~~P~l~~~p~-~~V~~G~~vtL~C~~~~~-~~~~~w~k~g~~~~~~~~ 151 (257)
T 1b6u_A 74 AGTYRCYGSVTHSPYQLSAPSDPLDIVITGLYEKPSLSAQPG-PTVLAGESVTLSCSSRSS-YDMYHLSREGEAHERRFS 151 (257)
T ss_dssp CEEEEEEEECSSCTTSCCCCCCCEEEEEECSSCCCEEECSSC-TTCBTTCEEEEEEECSSC-CSEEEEEETTSSCEECCB
T ss_pred CEEEEEeEeccCCCccccccCCCEEEecccCCCCcceEccCC-CccCCCCEEEEEEeCCCC-CcEEEEEECCcccCcccc
Confidence 69999999864321 1111122233 35677776665 467899999999999775 4689999998765421
Q ss_pred --------CCCeeEEeecCCCCeEEEeeeCCc---------cceeEEeecCCCCCCCccccC-CcceeEecCCcEEEEEe
Q psy2441 74 --------RNPRYNLLTSGAPGTYIKIKPNLF---------SPLSVYSADKIPPGFPQITEA-PSTKVVEISHTTVLHCS 135 (212)
Q Consensus 74 --------~~~~~~~~~~~~~g~~l~i~~~~~---------~~~~v~~~~~~~~~~p~~~~~-~~~~~~~~g~~~~l~C~ 135 (212)
....+.+....|.|.|.|...... ..+.+... +.|.+... +.......|..+.|.|.
T Consensus 152 ~~~~~~~~~~~~l~I~~v~D~G~Y~C~a~~~~~p~~~s~~S~pl~L~V~-----g~p~~~~p~~~~~~~~~g~~~~l~~~ 226 (257)
T 1b6u_A 152 AGPKVNGTFQADFPLGPATHGGTYRCFGSFRDSPYEWSNSSDPLLVSVT-----GNPSNSWPSPTEPSSETGNPRHLHAA 226 (257)
T ss_dssp CBCCSSSCCBEEEEEEECCSCEEEEEEEECSSCTTBBCCCCCCEEECCB-----CCC-----------------------
T ss_pred cccccCCceeEEEEecccccCEEEEEEEEcCCCCcccccCCCCEEEEEe-----ccCCCCCCCCcccCccCCCeEEEEEE
Confidence 124566665568999999876421 11222111 11222211 11123445888889877
Q ss_pred eeeCCCCceEEEeCC
Q psy2441 136 ASGNPPPKISWIREM 150 (212)
Q Consensus 136 ~~~~p~~~i~W~~~~ 150 (212)
. |.+.+.|.|..-+
T Consensus 227 ~-~~~~~~~~~~~~~ 240 (257)
T 1b6u_A 227 A-EQKLISEEDLNLD 240 (257)
T ss_dssp ---------------
T ss_pred E-cchHHHHHHhhhh
Confidence 6 5666678886533
No 407
>2aw2_A B and T lymphocyte attenuator; IGI domain, IGG domain, TNFRSF, protein-protein complex, IMM system; HET: NAG FUL; 2.80A {Homo sapiens} SCOP: b.1.1.1
Probab=99.11 E-value=2.3e-09 Score=63.17 Aligned_cols=86 Identities=19% Similarity=0.298 Sum_probs=65.9
Q ss_pred ceeEecCCcEEEEEeeee-CCCCceEEEeCC----EEecCCCCCceEEcCCCCceeEEEcCCCCCCCeeEEEEEEccccc
Q psy2441 121 TKVVEISHTTVLHCSASG-NPPPKISWIREM----LPVDTSRNPRYNLLTSGAPGALQITNSIEEDQGKYECVAENEVGT 195 (212)
Q Consensus 121 ~~~~~~g~~~~l~C~~~~-~p~~~i~W~~~~----~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~n~~g~ 195 (212)
...+..|+++.|.|.+.+ .+.|++.|-+-+ .+++.. ...+....+.....|.+..+...|+|.|.|.|.+..|.
T Consensus 20 ~hsv~~G~~f~leCpv~yc~~rP~VtWcKln~~~c~~L~~~-~q~w~E~~N~s~fvLhf~~V~~sDsGsYRCsAn~~sg~ 98 (120)
T 2aw2_A 20 EHSILAGDPFELECPVKYCANRPHVTWCKLNGTTCVKLEDR-QTSWKEEKNISFFILHFEPVLPNDNGSYRCSANFQSNL 98 (120)
T ss_dssp EEEEETTSCEEEEEEEECSSSCCEEEEEEECSSCEEECCSS-CEEEEECSSCEEEEEEESSCCGGGCEEEEEEEEETTEE
T ss_pred cceEecCCeEEEEccEEeccCCCceEEEecCCceEEECccc-cccceecCCeeEEEEEEeeeeEcCCcceEEEeeCCCCc
Confidence 356888999999999988 588999998844 455543 11222222322458999999999999999999999999
Q ss_pred ceecceEEEEec
Q psy2441 196 EYSPSTMLYVKG 207 (212)
Q Consensus 196 ~~~~~~~l~v~~ 207 (212)
..+...++.|++
T Consensus 99 ieSHsvtI~Vt~ 110 (120)
T 2aw2_A 99 IESHSTTLYVTD 110 (120)
T ss_dssp EECCCEEEEEEC
T ss_pred EEeeEEEEEEEe
Confidence 988878888875
No 408
>1moe_A Anti-CEA MAB T84.66; anti carcinoembryonic antigen, diabody, dimer, SCFV, variable domain, immune system; 2.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=99.11 E-value=3.7e-10 Score=79.35 Aligned_cols=94 Identities=21% Similarity=0.338 Sum_probs=66.0
Q ss_pred cccCCcceeEecCCcEEEEEeeeeCC----CCceEEEeCC--EEec----------CCCCCceEEcCCCCceeEEEcCCC
Q psy2441 115 ITEAPSTKVVEISHTTVLHCSASGNP----PPKISWIREM--LPVD----------TSRNPRYNLLTSGAPGALQITNSI 178 (212)
Q Consensus 115 ~~~~~~~~~~~~g~~~~l~C~~~~~p----~~~i~W~~~~--~~~~----------~~~~~~~~~~~~~~~~~l~i~~~~ 178 (212)
+...+....+.+|+.+.|.|.+.+.| .+.+.|+++. .... .....++....++...+|.|.++.
T Consensus 4 v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~ 83 (240)
T 1moe_A 4 LTQSPASLAVSLGQRATMSCRAGESVDIFGVGFLHWYQQKPGQPPKLLIYRASNLESGIPVRFSGTGSRTDFTLIIDPVE 83 (240)
T ss_dssp EEEECSEEEECTTSCEEEEEEESSCCEETTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCC
T ss_pred eEeeCCeEEecCCCCEEEEEeCCCccccCCCceEEEEEECCCCCceEEEEEecccCcCCCccEEEEecCCeEEEEEcCCC
Confidence 33455667788999999999999988 7899999852 1110 001245554433334689999999
Q ss_pred CCCCeeEEEEEEcccccceecceEEEEecc
Q psy2441 179 EEDQGKYECVAENEVGTEYSPSTMLYVKGT 208 (212)
Q Consensus 179 ~~d~g~y~C~a~n~~g~~~~~~~~l~v~~~ 208 (212)
.+|+|.|.|.+.|..+........|.|...
T Consensus 84 ~~D~G~Y~C~~~n~~~~~~~~~~~l~V~~~ 113 (240)
T 1moe_A 84 ADDVATYYCQQTNEDPYTFGGGTKLEIKGG 113 (240)
T ss_dssp GGGCEEEEEEECSSSSCCBCCCEEEEECCC
T ss_pred hhhCEEEEEEEccCCceeecCCEEEEEecC
Confidence 999999999999986653333367777654
No 409
>3rrq_A Protein PD-1, programmed cell death protein 1; programmed death-1, costimulatory, immune system; 2.10A {Homo sapiens}
Probab=99.11 E-value=1.2e-09 Score=69.37 Aligned_cols=92 Identities=18% Similarity=0.268 Sum_probs=63.5
Q ss_pred cCCcceeEecCCcEEEEEeeeeCC-CCceEEEeC--CEE---e-c-------CCCCCceEEc--CCCCceeEEEcCCCCC
Q psy2441 117 EAPSTKVVEISHTTVLHCSASGNP-PPKISWIRE--MLP---V-D-------TSRNPRYNLL--TSGAPGALQITNSIEE 180 (212)
Q Consensus 117 ~~~~~~~~~~g~~~~l~C~~~~~p-~~~i~W~~~--~~~---~-~-------~~~~~~~~~~--~~~~~~~l~i~~~~~~ 180 (212)
..+....+.+|+.+.|.|...+.. ...+.|++. +.. + . .....|+... .......|.|.++..+
T Consensus 6 Q~P~~~~v~~G~~vtL~C~~s~~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~~Rf~~~~~~~~~~~sL~I~~~~~~ 85 (129)
T 3rrq_A 6 FSPALLVVTEGDNATFTCSFSNTSESFVLNWYRMSPSNQTDKLAAFPEDRSQPGQDCRFRVTQLPNGRDFHMSVVRARRN 85 (129)
T ss_dssp EECSEEEEETTSCEEEEEECCCCC-CEEEEEEEEESTTSCEEEEEETC--------CCEEEEECTTSSEEEEEESSCCGG
T ss_pred ECCCEEEEeCCCCEEEEeEecCCCCCcEEEEeEeCCCCCccEEEEEcCCccCCCcCCcEEEEEcCCCCEEEEEECCCChh
Confidence 345567789999999999997764 457999973 211 1 0 0012466554 2333578999999999
Q ss_pred CCeeEEEEEEcccccc----eecceEEEEecce
Q psy2441 181 DQGKYECVAENEVGTE----YSPSTMLYVKGTQ 209 (212)
Q Consensus 181 d~g~y~C~a~n~~g~~----~~~~~~l~v~~~~ 209 (212)
|+|.|.|.+.|..+.. ... +.|.|.++.
T Consensus 86 Dsg~Y~C~~~~~~~~~~~~~s~~-~~L~V~~~~ 117 (129)
T 3rrq_A 86 DSGTYLCGAISLAPKLQIKESLR-AELRVTERR 117 (129)
T ss_dssp GCEEEEEEEEECGGGCEEEECCC-EEEEEECCC
T ss_pred HCEEEEEEEEecCCCceeeEece-EEEEEecCc
Confidence 9999999999877654 233 778887653
No 410
>2x1w_L Vascular endothelial growth factor receptor 2; hormone-signaling protein complex, angiogenesis, glycoprotein, HOST-virus interaction, membrane; HET: NAG BMA; 2.70A {Homo sapiens} PDB: 2x1x_R*
Probab=99.10 E-value=3.1e-10 Score=78.43 Aligned_cols=83 Identities=17% Similarity=0.105 Sum_probs=57.9
Q ss_pred CcceeEecC--CcEEEEEeeeeCCCCceEEEeC---CEEecCCCCCceEEcCCCCceeEEEcCCCCCCCeeEEEEEEccc
Q psy2441 119 PSTKVVEIS--HTTVLHCSASGNPPPKISWIRE---MLPVDTSRNPRYNLLTSGAPGALQITNSIEEDQGKYECVAENEV 193 (212)
Q Consensus 119 ~~~~~~~~g--~~~~l~C~~~~~p~~~i~W~~~---~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~n~~ 193 (212)
+....+.+| +.+.|.|.+.+ |.+.+.|+++ +..+... .++....+ ..|.|.+++.+|+|.|.|.|.|..
T Consensus 14 p~~v~v~eG~~~~v~L~C~~~~-p~~~v~w~~~~~~g~~~~~~--~~~~~~~~---~~l~I~~v~~~D~G~Y~C~a~n~~ 87 (213)
T 2x1w_L 14 HGVVYITENKNKTVVIPCLGSI-SNLNVSLCARYPEKRFVPDG--NRISWDSK---KGFTIPSYMISYAGMVFCEAKIND 87 (213)
T ss_dssp CEEEEECCSTTCEEEECCCBSS-TTCCEEEEEETTTEEECCCS--SSCEEETT---TEEEEEGGGTTTCSEEEEEEC---
T ss_pred ceEEEEecCCCccEEEeeccCC-CCcEEEEEhhcCCCccccCC--CcccccCC---ccEEEccCChhcCceEEEEEEECC
Confidence 456778899 99999999976 7789999884 5554432 33333333 579999999999999999999865
Q ss_pred ccceecceEEEEec
Q psy2441 194 GTEYSPSTMLYVKG 207 (212)
Q Consensus 194 g~~~~~~~~l~v~~ 207 (212)
+...+..+.|.|..
T Consensus 88 ~~~~s~~~~l~v~~ 101 (213)
T 2x1w_L 88 ESYQSIMYIVVVVG 101 (213)
T ss_dssp -CEECCCEEEEECB
T ss_pred eeEEEEEEEEEEeC
Confidence 54443335666643
No 411
>1xt5_A Variable region-containing chitin-binding protein 3; innate immunity, VCBP, primordial antigen receptor, florida lancelet, amphioxus; 1.15A {Branchiostoma floridae}
Probab=99.10 E-value=8.3e-10 Score=70.60 Aligned_cols=88 Identities=26% Similarity=0.349 Sum_probs=60.1
Q ss_pred CCcceeEecCCcEEEEEeeee---CCCCceEEEeCCEEe-----c-----------------------CCCCCceEEcCC
Q psy2441 118 APSTKVVEISHTTVLHCSASG---NPPPKISWIREMLPV-----D-----------------------TSRNPRYNLLTS 166 (212)
Q Consensus 118 ~~~~~~~~~g~~~~l~C~~~~---~p~~~i~W~~~~~~~-----~-----------------------~~~~~~~~~~~~ 166 (212)
.+....+.+|+++.|.|.+.. .+.+.+.|++++... . .....|+.+..
T Consensus 10 ~~~~v~v~~G~~v~L~C~~~~~~~~~~~~v~W~k~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~- 88 (135)
T 1xt5_A 10 THTEVEVHAGGTVELPCSYQLANDTQPPVISWLKGASPDRSTKVFKGNYNWQGEGLGFVESDSYKESFGDFLGRASVAN- 88 (135)
T ss_dssp SCSEEEEETTSCEEECCEEEEETCCSCCEEEEEEESSSSSEEEEEEEEECCCCTTCCCCTTSEEEEECGGGTTTEEESC-
T ss_pred CCceEEEeCCCCEEEeeEeecCCCCCccEEEEEeeCCCCCceEEEEeccccccccccccccccccccChhhcCcEEEec-
Confidence 445567889999999999754 567799999864321 0 00013444432
Q ss_pred CCceeEEEcCCCCCCCeeEEEEEEccc-----ccceecceEEEEec
Q psy2441 167 GAPGALQITNSIEEDQGKYECVAENEV-----GTEYSPSTMLYVKG 207 (212)
Q Consensus 167 ~~~~~l~i~~~~~~d~g~y~C~a~n~~-----g~~~~~~~~l~v~~ 207 (212)
.....|.|.+++.+|+|.|.|.+.|.. |..... +.|.|.+
T Consensus 89 ~~~~sL~I~~v~~~D~G~Y~C~v~~~~~~~~~g~~~~~-~~L~V~g 133 (135)
T 1xt5_A 89 LAAPTLRLTHVHPQDGGRYWCQVAQWSIRTEFGLDAKS-VVLKVTG 133 (135)
T ss_dssp TTSCCEEECSCCGGGCEEEEEEEECSSCCSGGGEEEEE-EEEEEET
T ss_pred CCCCeEEECCCChhhCcEEEEEEEcCCcccccccccee-EEEEEec
Confidence 123689999999999999999999853 333344 6776664
No 412
>3qp3_A Titin; I-SET IG-like, sarcomere, M-BAND, transferase; 2.00A {Homo sapiens}
Probab=99.10 E-value=4.4e-10 Score=68.39 Aligned_cols=76 Identities=13% Similarity=0.179 Sum_probs=55.9
Q ss_pred CCCCCeEEeCCCccEEeeCCeEEEEcccCCCCCCcEEEEeCCEEecCCCCCeeEEeecCCCCeEEEeeeCCccceeEEe
Q psy2441 26 PPGFPQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREMLPVDTSRNPRYNLLTSGAPGTYIKIKPNLFSPLSVYS 104 (212)
Q Consensus 26 ~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~k~g~~l~~~~~~~~~~~~~~~~g~~l~i~~~~~~~~~v~~ 104 (212)
+..+|.|...+.+..+.+|+.+.|.|.+.+.|.+.+.|+|+|..+... .++.+... +....|.|.++...+...|.
T Consensus 5 ~~~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~i~W~k~~~~~~~~--~~~~~~~~-~~~~~L~i~~~~~~D~G~Y~ 80 (103)
T 3qp3_A 5 LDHAPRITLRMRSHRVPCGQNTRFILNVQSKPTAEVKWYHNGVELQES--SKIHYTNT-SGVLTLEILDCHTDDSGTYR 80 (103)
T ss_dssp TCEEEEEEECCCCEEEETTCCEEEEEEEEEESCCEEEEEETTEECCCC--SSEEEEEE-TTEEEEEECSCCGGGCEEEE
T ss_pred CCCCCEEEeCCcceEEeCCCeEEEEEEEEecCCCEEEEEECCEECCCC--CCEEEEEC-CCEEEEEEcCCCcccCEEEE
Confidence 356788988999999999999999999999999999999999998775 55555443 22234445444444434333
No 413
>1q0x_L FAB 9B1, light chain; anti-morphine antibody, FAB fragment, immune system; HET: PG4; 1.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q0y_L* 1ngp_L* 1ngq_L 3ks0_L* 1gig_L 2vir_A 2vis_A* 2vit_A 1sm3_L 4a6y_L 1ind_L* 1ine_L* 1yuh_L* 2zpk_L 3rhw_K* 3ri5_K* 3ria_K* 3rif_K* 1mfe_L* 1mfb_L* ...
Probab=99.10 E-value=6.6e-10 Score=76.56 Aligned_cols=88 Identities=23% Similarity=0.280 Sum_probs=62.2
Q ss_pred CcceeEecCCcEEEEEeeeeCC---CCceEEEeCC--EEec----------CCCCCceEEcCCCCceeEEEcCCCCCCCe
Q psy2441 119 PSTKVVEISHTTVLHCSASGNP---PPKISWIREM--LPVD----------TSRNPRYNLLTSGAPGALQITNSIEEDQG 183 (212)
Q Consensus 119 ~~~~~~~~g~~~~l~C~~~~~p---~~~i~W~~~~--~~~~----------~~~~~~~~~~~~~~~~~l~i~~~~~~d~g 183 (212)
+....+.+|+.+.|.|.+.+.| .+.+.|++++ ..+. .....++..........|.|.+++.+|+|
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G 86 (212)
T 1q0x_L 7 ESALTTSPGETVTLTCRSSTGAVTTSNYANWVQEKPDHLFTGLIGGTNNRAPGVPARFSGSLIGDKAALTITGAQTEDEA 86 (212)
T ss_dssp CSEEEECTTCCEEEEEEESSSCCCGGGCCEEEEEETTTEEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCE
T ss_pred CCeEeecCCCCEEEEEEecccccCCCCeEEEEEeCCCCCceEEEEcCcccCCcccccEEEEeeCCEEEEEECCCCccCCE
Confidence 5667788999999999998877 4789999852 2220 11124554443333468999999999999
Q ss_pred eEEEEEEcccccceecceEEEEe
Q psy2441 184 KYECVAENEVGTEYSPSTMLYVK 206 (212)
Q Consensus 184 ~y~C~a~n~~g~~~~~~~~l~v~ 206 (212)
.|.|.+.|..+........|.|.
T Consensus 87 ~Y~C~~~~~~~~~~~~~~~l~V~ 109 (212)
T 1q0x_L 87 IYFCALWSNNKLVFGGGTKLTVL 109 (212)
T ss_dssp EEEEEEECSSCEEECCCEEEEEC
T ss_pred EEEEEEecCchhhcCCCeEEEEe
Confidence 99999999876433332566664
No 414
>3auv_A SC-DSFV derived from the G6-FAB; SC-DSFV (disulfide-stabilized SCFV), SCFV, monovalent antibo antibody engineering, immune system; 2.40A {Homo sapiens} PDB: 2kh2_B 3iy0_L
Probab=99.09 E-value=4e-10 Score=81.00 Aligned_cols=96 Identities=21% Similarity=0.325 Sum_probs=65.7
Q ss_pred CccccCCcceeEecCCcEEEEEeeeeCCCCceEEEeCCE-----EecC-------CCCCceEEcCCCCceeEEEcCCCCC
Q psy2441 113 PQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREML-----PVDT-------SRNPRYNLLTSGAPGALQITNSIEE 180 (212)
Q Consensus 113 p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~-----~~~~-------~~~~~~~~~~~~~~~~l~i~~~~~~ 180 (212)
+.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++. .+.. ....++....++...+|.|.++..+
T Consensus 13 ~~v~~~p~~~~v~~G~~v~L~C~~~~~p~~~i~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~ 92 (276)
T 3auv_A 13 IQMTQSPSSLSASVGDRVTITCRASQDVSTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSGSGTDFTLTISSLQPE 92 (276)
T ss_dssp CCEEEECSEEECCTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGG
T ss_pred eeEEeCCCeEEEcCCCCEEEEeEcCCCCCCcEEEEEECCCCCCEEEEEEcCccCCCCCCCEEEeccCCeEEEEEccCChh
Confidence 345555666778899999999999999989999998542 1110 1124555443333468999999999
Q ss_pred CCeeEEEEEEcccccceecceEEEEecc
Q psy2441 181 DQGKYECVAENEVGTEYSPSTMLYVKGT 208 (212)
Q Consensus 181 d~g~y~C~a~n~~g~~~~~~~~l~v~~~ 208 (212)
|+|.|.|.+.|..+........|.|...
T Consensus 93 DsG~Y~C~~~n~~~~~~~~~~~l~V~~~ 120 (276)
T 3auv_A 93 DFATYYCQQHYTTPPTFGCGTKVEIKGG 120 (276)
T ss_dssp GCEEEEEEECSSSSCCCCCCEEEEC---
T ss_pred hCEEEEEEEecCCcccccCCEEEEEecC
Confidence 9999999999976543322255665543
No 415
>3r4d_A CEA-related cell adhesion molecule 1, isoform 1/2; immunoglobulin, beta-sandwich, mceacam1A - immunoglobulin FO spike NTD - galectin-like beta-sandwich fold; HET: NAG; 3.10A {Mus musculus} PDB: 1l6z_A*
Probab=99.09 E-value=7.3e-10 Score=76.00 Aligned_cols=84 Identities=13% Similarity=0.105 Sum_probs=61.5
Q ss_pred ceeEecCCcEEEEEeeeeCCCCceEEEeCCEEecCC-----------------CCCceEEcCCCCceeEEEcCCCCCCCe
Q psy2441 121 TKVVEISHTTVLHCSASGNPPPKISWIREMLPVDTS-----------------RNPRYNLLTSGAPGALQITNSIEEDQG 183 (212)
Q Consensus 121 ~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~-----------------~~~~~~~~~~~~~~~l~i~~~~~~d~g 183 (212)
...+.+|+.+.|.|.+.+.+.+.+.|++++...... ...++....+ ..|.|.+++.+|+|
T Consensus 8 ~~~v~~G~~v~L~C~~~~~~~~~v~W~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~r~~~~~~---~~L~i~~v~~~D~G 84 (208)
T 3r4d_A 8 PPQVAEDNNVLLLVHNLPLALGAFAWYKGNTTAIDKEIARFVPNSNMNFTGQAYSGREIIYSN---GSLLFQMITMKDMG 84 (208)
T ss_dssp SSEEETTCCEEEEEECCCSSCSEEEEEESSCCCGGGEEEEEEGGGTEEEECTTCCSSEEECTT---SCEEECSCCGGGCE
T ss_pred cceeecCCcEEEEEeCCCCCceEEEeccCCCCCccceEEEEecCCCccccCccccceeEEecC---CeEEEccccccCCe
Confidence 356788999999999888888999999875322110 1234444444 68999999999999
Q ss_pred eEEEEEEccc-ccceecceEEEEecc
Q psy2441 184 KYECVAENEV-GTEYSPSTMLYVKGT 208 (212)
Q Consensus 184 ~y~C~a~n~~-g~~~~~~~~l~v~~~ 208 (212)
.|.|.+.|.. +..... +.|.|...
T Consensus 85 ~Y~C~~~~~~~~~~~~~-~~l~V~~~ 109 (208)
T 3r4d_A 85 VYTLDMTDENYRRTQAT-VRFHVHQP 109 (208)
T ss_dssp EEEEEEECSSCEEEEEE-EEEEEECC
T ss_pred EEEEEEEcccCceeEEE-EEEEeccC
Confidence 9999999985 444434 66777544
No 416
>4f9l_D 20.1 anti-BTN3A1 antibody fragment; B7 superfamily, butyrophilin, CD277, immune system; HET: NAG; 3.14A {Mus musculus}
Probab=99.09 E-value=1.8e-08 Score=69.83 Aligned_cols=158 Identities=20% Similarity=0.277 Sum_probs=92.8
Q ss_pred EEeCCCccEEeeCCeEEEEcccCCCCCCcEEEEeC--CE---Ee-------cCCCCCeeEEeecCCCCeEEEeeeCCccc
Q psy2441 32 ITEAPSTKVVEISHTTVLHCSASGNPPPKISWIRE--ML---PV-------DTSRNPRYNLLTSGAPGTYIKIKPNLFSP 99 (212)
Q Consensus 32 ~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~k~--g~---~l-------~~~~~~~~~~~~~~~~g~~l~i~~~~~~~ 99 (212)
++..|..+.+..|+.|+|.|.+...-...+.||+. |+ .| ...-..||.-... +....|+|......+
T Consensus 4 lTQsP~sls~s~G~~vtisC~~S~~i~~y~~WyqQ~pG~~P~lLiy~~s~~~sGvp~RFSgS~S-gt~ftLtIs~lq~eD 82 (259)
T 4f9l_D 4 LTQSPSSLSASLGDTITITCHASQNINLWLSWYQQRPGNIPKLLIYRASNLHTGVPSRFSGSGS-ATGFTLTISSLQPED 82 (259)
T ss_dssp EEEECSBCCBCTTCEEEEEEEESSCCTTCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEE-TTEEEEEEESCCGGG
T ss_pred EEccCCeEEECCCCCEEEEEEcCCCCCCCEEEEEECCCCCCEEEEECCCccCCCCCCCEEeecc-CCeEEEEEcccChhh
Confidence 34667788899999999999875443345889973 21 11 1111356654433 333457777765555
Q ss_pred eeEEeecCCCCCC-----------------Cccc-------------------cCCcceeEecCCcEEEEEeeeeCCC--
Q psy2441 100 LSVYSADKIPPGF-----------------PQIT-------------------EAPSTKVVEISHTTVLHCSASGNPP-- 141 (212)
Q Consensus 100 ~~v~~~~~~~~~~-----------------p~~~-------------------~~~~~~~~~~g~~~~l~C~~~~~p~-- 141 (212)
..+|.+......+ |... .......+.+|.++.|.|.+.|...
T Consensus 83 ~A~YyC~~~~~~~~tFG~GTkLeikr~~aa~~~s~~~~s~~a~ssGv~sqvqL~eSG~~lvkPG~Sl~LSC~aSG~tfs~ 162 (259)
T 4f9l_D 83 IATYYCQQGHSYPYTFGGGTKLDIKRADAGGGGSGGGGSGGGGSGGGGSQVQLQESGAELVKPGASVKLSCKASGYTFTR 162 (259)
T ss_dssp CEEEEEEECSSSSCCBCCCCEECBCCC----------------------CCCEEEECCCEEESSSCEEEEEEEESSCGGG
T ss_pred CEEEEEeecCCCCCCccCCeEEEEeccccCccccccccccccccCCccccceEEeECCCEECCCCcEEEEEeeeCCCccc
Confidence 5555542211000 1000 0011134788999999999988653
Q ss_pred CceEEEeC--CEEec------CC---------CCCceEEcCCCC--ceeEEEcCCCCCCCeeEEEEEE
Q psy2441 142 PKISWIRE--MLPVD------TS---------RNPRYNLLTSGA--PGALQITNSIEEDQGKYECVAE 190 (212)
Q Consensus 142 ~~i~W~~~--~~~~~------~~---------~~~~~~~~~~~~--~~~l~i~~~~~~d~g~y~C~a~ 190 (212)
-.+.|.+. |+.++ .. -+.|+.+..++. ...|.+.+++.+|.+.|.|...
T Consensus 163 y~~~WvRQaPGkgLEwvg~I~~~~g~t~Ya~svkGRfTISrD~s~nt~yLqm~sL~~eDTAvYYCAr~ 230 (259)
T 4f9l_D 163 YYLYWVKQRPGQGLEWIGEINPNNGGTKFNEKFKSKATLTVDKSSRTTYIQLSSLTSEDSAVYYCSRE 230 (259)
T ss_dssp SCEEEEEECTTSCEEEEEEECTTTCCEEECTTSTTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEE
T ss_pred CcEEEEEECCCCceEEEeEEeCCCCceEecHhhcCCEEEEEEccccEEEEEECCCChHHCEEEEEEEe
Confidence 36788872 22211 10 134555554432 4568899999999999999654
No 417
>3jz7_A MCAR, CAR, coxsackievirus and adenovirus receptor homolog; cell adhesion molecule, immunoglobuline superfamily, alternative splicing, cell adhesion; 2.19A {Mus musculus} PDB: 3mj7_B* 2npl_X
Probab=99.09 E-value=7.7e-10 Score=76.02 Aligned_cols=91 Identities=20% Similarity=0.297 Sum_probs=65.9
Q ss_pred CCcceeEecCCcEEEEEeeeeCC----CCceEEEe----------------CCEEecC---CCCCceEEcCC---CCcee
Q psy2441 118 APSTKVVEISHTTVLHCSASGNP----PPKISWIR----------------EMLPVDT---SRNPRYNLLTS---GAPGA 171 (212)
Q Consensus 118 ~~~~~~~~~g~~~~l~C~~~~~p----~~~i~W~~----------------~~~~~~~---~~~~~~~~~~~---~~~~~ 171 (212)
.+....+.+|+.+.|.|.+.+.+ .+.+.|++ ++..... ....++....+ ....+
T Consensus 6 ~~~~v~v~~G~~v~L~C~~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~ 85 (214)
T 3jz7_A 6 PEQRIEKAKGETAYLPCKFTLSPEDQGPLDIEWLISPSDNQIVDQVIILYSGDKIYDNYYPDLKGRVHFTSNDVKSGDAS 85 (214)
T ss_dssp CEEEEEEETTSCEEECCBCCCCTTCCSCCEEEEEEEESSSSCCSEEEEEEETTEEECCCCGGGTTTEEESCSCGGGTBCC
T ss_pred CCceEEEecCCCEEEEEEEecCCCCCCcEEEEEEecCCCCCCCceEEEEEeCCeEccccCCccccceEEeccCccCCccc
Confidence 34456788999999999998877 46999988 3333321 11344544431 12378
Q ss_pred EEEcCCCCCCCeeEEEEEEcccccceecceEEEEecce
Q psy2441 172 LQITNSIEEDQGKYECVAENEVGTEYSPSTMLYVKGTQ 209 (212)
Q Consensus 172 l~i~~~~~~d~g~y~C~a~n~~g~~~~~~~~l~v~~~~ 209 (212)
|.|.+++.+|+|.|.|.+.|..|..... +.|.|.+.+
T Consensus 86 L~i~~v~~~D~G~Y~C~~~~~~~~~~~~-~~l~V~~~p 122 (214)
T 3jz7_A 86 INVTNLQLSDIGTYQCKVKKAPGVANKK-FLLTVLVKP 122 (214)
T ss_dssp EEECSCCGGGCEEEEEEEEETTEEEEEE-EEEEEECCC
T ss_pred EEEccCChhhCeEEEEEEEeCCCccccE-EEEEEEcCC
Confidence 9999999999999999999998877666 777776543
No 418
>2fbo_J V1V2;, variable region-containing chitin-binding protein 3; immunoglobulin, VCBP, V-type, V SET, immune system; 1.85A {Branchiostoma floridae}
Probab=99.08 E-value=3.4e-10 Score=79.86 Aligned_cols=89 Identities=25% Similarity=0.318 Sum_probs=63.4
Q ss_pred CCcceeEecCCcEEEEEeeee---CCCCceEEEeCCEEec----------------------------CCCCCceEEcCC
Q psy2441 118 APSTKVVEISHTTVLHCSASG---NPPPKISWIREMLPVD----------------------------TSRNPRYNLLTS 166 (212)
Q Consensus 118 ~~~~~~~~~g~~~~l~C~~~~---~p~~~i~W~~~~~~~~----------------------------~~~~~~~~~~~~ 166 (212)
.+....+.+|+.+.|.|.+.+ .+.+.+.|++++.... .....++.+..+
T Consensus 8 ~~~~v~v~~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 87 (250)
T 2fbo_J 8 THTEVEVHAGGTVELPCSYQLANDTQPPVISWLKGASPDRSTKVFKGNYNWQGEGLGFVESDSYKESFGDFLGRASVANL 87 (250)
T ss_dssp SCSEEEECTTSCEEECCEEEECSCCSCCEEEEEEEEETTEEEEEEEEEECCCBTTBCCCTTSEEEEECGGGTTTEECSCT
T ss_pred CCCceEEecCCeEEEEEEeEcCCCCCceEEEEEeCCCCCccEEEEeeccccccccccccccccccccCCCcCceEEeccC
Confidence 444577889999999999987 7888999999864320 001233333221
Q ss_pred CCceeEEEcCCCCCCCeeEEEEEEcccccce-----ecceEEEEecc
Q psy2441 167 GAPGALQITNSIEEDQGKYECVAENEVGTEY-----SPSTMLYVKGT 208 (212)
Q Consensus 167 ~~~~~l~i~~~~~~d~g~y~C~a~n~~g~~~-----~~~~~l~v~~~ 208 (212)
+...|.|.+++.+|+|.|.|.+.|..+... .. +.|.|.+.
T Consensus 88 -~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~-~~l~V~~~ 132 (250)
T 2fbo_J 88 -AAPTLRLTHVHPQDGGRYWCQVAQWSIRTEFGLDAKS-VVLKVTGH 132 (250)
T ss_dssp -TSCCEEECSCCGGGCEEEEEEEECTTCCSGGGEEEEE-EEEEETTT
T ss_pred -CcceEEEeeCChhhCeEEEEEeccCccCCccccccee-EEEEEecc
Confidence 236899999999999999999999877542 23 66777664
No 419
>1g1c_A Immunoglobulin-like domain I1 from titin; immunoglobulin domain, beta-sandwhich, I-SET, structural protein; 2.10A {Homo sapiens} SCOP: b.1.1.4
Probab=99.08 E-value=4.3e-10 Score=67.87 Aligned_cols=74 Identities=15% Similarity=0.191 Sum_probs=53.1
Q ss_pred CCCeEEeCCCccEEeeCCeEEEEcccCCCCCCcEEEEeCCEEecCCCCCeeEEeecCCCCeEEEeeeCCccceeEE
Q psy2441 28 GFPQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREMLPVDTSRNPRYNLLTSGAPGTYIKIKPNLFSPLSVY 103 (212)
Q Consensus 28 ~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~k~g~~l~~~~~~~~~~~~~~~~g~~l~i~~~~~~~~~v~ 103 (212)
.+|.|...+....+.+|+.+.|.|.+.|.|.+.+.|+|+|..+... .++.+....+....|.|.++...+...|
T Consensus 4 ~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~g~~~~~~--~~~~~~~~~~~~~~L~i~~v~~~D~G~Y 77 (99)
T 1g1c_A 4 EAPKIFERIQSQTVGQGSDAHFRVRVVGKPDPECEWYKNGVKIERS--DRIYWYWPEDNVCELVIRDVTGEDSASI 77 (99)
T ss_dssp EEEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCC--SSEEEEEEETTEEEEEECSCCGGGCEEE
T ss_pred CCCceEecCcceEEcCCCcEEEEEEEEEeCCCEEEEEECCEECCCC--CCEEEEEcCCCEEEEEECCCCcCCCEEE
Confidence 5788888899999999999999999999999999999999998765 4444332212333444544444333333
No 420
>1pew_A JTO2, A lambda-6 type immunoglobulin light chain, domain; beta sheet, immune system; 1.60A {Homo sapiens} SCOP: b.1.1.1 PDB: 1cd0_A 1pw3_A 2cd0_A 2w0k_A 3b5g_A 3bdx_A* 2w0l_A
Probab=99.08 E-value=1.5e-09 Score=66.82 Aligned_cols=74 Identities=20% Similarity=0.353 Sum_probs=53.8
Q ss_pred CcceeEecCCcEEEEEe-eeeCC-CCceEEEeCCEEec----------CCCCCceEEc--CCCCceeEEEcCCCCCCCee
Q psy2441 119 PSTKVVEISHTTVLHCS-ASGNP-PPKISWIREMLPVD----------TSRNPRYNLL--TSGAPGALQITNSIEEDQGK 184 (212)
Q Consensus 119 ~~~~~~~~g~~~~l~C~-~~~~p-~~~i~W~~~~~~~~----------~~~~~~~~~~--~~~~~~~l~i~~~~~~d~g~ 184 (212)
|....+.+|+++.|.|. +.+.+ .+.+.|++...... .....|+... .......|.|.++..+|+|.
T Consensus 7 p~~~~v~~G~~v~L~C~v~~~~~~~~~v~W~r~~~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~DsG~ 86 (109)
T 1pew_A 7 PHSVSESPGKTVTISCTRSSGNIASNYVQWYQQRSAPITVIYEDNQRPSGVPDRFAGSIDRSSNSASLTISGLKTEDEAD 86 (109)
T ss_dssp CSEEEECTTSCEEEEEEESSSCGGGSCCEEEEC-CCCEEEEBTTTBCCTTCCTTEEEEEETTTTEEEEEECSCCGGGCEE
T ss_pred CCCEEEcCCCCEEEEEEeCCCCCCCccEEEEEECCCCcEEEEecCCcCCCCCCcEEEEeccCCCEEEEEECCCChhhCEE
Confidence 55677889999999999 77665 47899998762111 0013456554 33345689999999999999
Q ss_pred EEEEEEcc
Q psy2441 185 YECVAENE 192 (212)
Q Consensus 185 y~C~a~n~ 192 (212)
|.|.+.+.
T Consensus 87 Y~C~~~~~ 94 (109)
T 1pew_A 87 YYCQSYDA 94 (109)
T ss_dssp EEEEEEET
T ss_pred EEEEEEeC
Confidence 99999875
No 421
>2ens_A Advanced glycosylation END product-specific receptor; beta-sandwich, C2-SET, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.08 E-value=2.1e-10 Score=68.99 Aligned_cols=69 Identities=23% Similarity=0.419 Sum_probs=56.8
Q ss_pred CCCCeEEeCCCccEEeeCCeEEEEcccCCCCCCcEEEEeCCEEecCCCCCeeEEeec--CCCCeEEEeeeC
Q psy2441 27 PGFPQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREMLPVDTSRNPRYNLLTS--GAPGTYIKIKPN 95 (212)
Q Consensus 27 ~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~k~g~~l~~~~~~~~~~~~~--~~~g~~l~i~~~ 95 (212)
..+|.+...|....+.+|+.+.|.|.+.+.|.+.+.|+|++..+.......+.+... .|.|.|.|...+
T Consensus 8 ~~~~~i~~~p~~~~v~~G~~v~l~C~~~g~p~~~v~W~k~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n 78 (96)
T 2ens_A 8 LEEVQLVVEPEGGAVAPGGTVTLTCEVPAQPSPQIHWMKDGVPLPLPPSPVLILPEIGPQDQGTYSCVATH 78 (96)
T ss_dssp CCSCCCEEESTTSEECTTCEEEEECCCSSCSSCCCCCEESSSBCSSCCCSEEEEESCCTTTCEEEECEECC
T ss_pred CCCCEEEECCCCCEEcCCCeEEEEEEEccCCCCEEEEEECCEECcCCCCCEEEECCCCcccCEEEEEEEEe
Confidence 356788888888899999999999999999999999999999887654555666554 488888888766
No 422
>1eeq_A Kappa-4 immunoglobulin (light chain); protein stability, hydrogen bonds, immune system; 1.50A {Homo sapiens} SCOP: b.1.1.1 PDB: 1eeu_A 1lve_A 2lve_A 3lve_A 5lve_A 4lve_A 1efq_A 1qac_A 1ek3_A 2imm_A 1mvu_A 2ap2_A 1ap2_A 3bd3_A* 3bd4_A* 3bd5_A* 2imn_A 3dus_A* 3duu_A* 3dv4_A* ...
Probab=99.08 E-value=5.7e-10 Score=69.30 Aligned_cols=90 Identities=19% Similarity=0.300 Sum_probs=59.7
Q ss_pred cCCcceeEecCCcEEEEEeeeeCCC------CceEEEeCC--E---Eec-------CCCCCceEEcCCCCceeEEEcCCC
Q psy2441 117 EAPSTKVVEISHTTVLHCSASGNPP------PKISWIREM--L---PVD-------TSRNPRYNLLTSGAPGALQITNSI 178 (212)
Q Consensus 117 ~~~~~~~~~~g~~~~l~C~~~~~p~------~~i~W~~~~--~---~~~-------~~~~~~~~~~~~~~~~~l~i~~~~ 178 (212)
..+....+.+|+.+.|.|.+.+.+. +.+.|++.. . .+- .....|+..........|.|.++.
T Consensus 6 q~p~~v~v~~G~~v~L~C~~~~~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~ 85 (114)
T 1eeq_A 6 QSPDSLAVSLGERATINCKSSQSVLDSSNSKNYLAWYQQKPGQPPKLLIYWASTRESGVPDRFSGSGSGTDFTLTISSLQ 85 (114)
T ss_dssp EECSEEEECTTSCEEEEEEESSCCEETTTTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCC
T ss_pred ecCCeEEEcCCCeEEEEEEcCCCccccccCCccEEEEEECCCCCCEEEEEecCccCCCCCCCEEEeecCCEEEEEECCCC
Confidence 3455677889999999999987663 689999853 1 110 011345554433334689999999
Q ss_pred CCCCeeEEEEEEcccccceecceEEEEe
Q psy2441 179 EEDQGKYECVAENEVGTEYSPSTMLYVK 206 (212)
Q Consensus 179 ~~d~g~y~C~a~n~~g~~~~~~~~l~v~ 206 (212)
.+|+|.|.|.+.+...........|.|+
T Consensus 86 ~~DsG~Y~C~~~~~~~~~fg~GT~l~V~ 113 (114)
T 1eeq_A 86 AEDVAVYYCQQYYSHPYSFGQGTKLEIK 113 (114)
T ss_dssp GGGCEEEEEEECSSSSCEECCCEEEEEC
T ss_pred cccCEEEEEEEeeCCeEEECCCEEEEEe
Confidence 9999999999987532222222555553
No 423
>1j05_L T84.66 antibody, anti-CEA MAB T84.66, light chain; immunoglobulin, immune system; 1.50A {Mus musculus} SCOP: b.1.1.1 PDB: 1qfw_L* 1qnz_L 3iy3_A 3iy4_A
Probab=99.08 E-value=4.4e-10 Score=69.45 Aligned_cols=75 Identities=20% Similarity=0.336 Sum_probs=53.9
Q ss_pred CCcceeEecCCcEEEEEeeeeCC----CCceEEEeCC--EE---ec-------CCCCCceEEcCCCCceeEEEcCCCCCC
Q psy2441 118 APSTKVVEISHTTVLHCSASGNP----PPKISWIREM--LP---VD-------TSRNPRYNLLTSGAPGALQITNSIEED 181 (212)
Q Consensus 118 ~~~~~~~~~g~~~~l~C~~~~~p----~~~i~W~~~~--~~---~~-------~~~~~~~~~~~~~~~~~l~i~~~~~~d 181 (212)
.+....+.+|+.+.|.|.+.+.+ .+.+.|+++. .. +. .....|+....+.....|.|.++..+|
T Consensus 7 ~p~~~~~~~G~~v~L~C~~~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~L~I~~v~~~D 86 (111)
T 1j05_L 7 SPASLAVSLGQRATMSCRAGESVDIFGVGFLHWYQQKPGQPPKLLIYRASNLESGIPVRFSGTGSRTDFTLIIDPVEADD 86 (111)
T ss_dssp ECSEEECCTTSCEEEEEEESSCCEETTEECEEEEEECTTSCEEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGGG
T ss_pred eCCEEEEeCCCCEEEEeecCCCcccCCCceEEEEEeCCCCCCEEEEEecCcCCCCCCCcEEEEccCCEEEEEECCCCccc
Confidence 45556788999999999998776 4689999852 11 10 011245554433334689999999999
Q ss_pred CeeEEEEEEcc
Q psy2441 182 QGKYECVAENE 192 (212)
Q Consensus 182 ~g~y~C~a~n~ 192 (212)
+|.|.|.+.|.
T Consensus 87 sG~Y~C~~~~~ 97 (111)
T 1j05_L 87 VATYYCQQTNE 97 (111)
T ss_dssp CEEEEEEECSS
T ss_pred CEEEEEEEecC
Confidence 99999999875
No 424
>2edj_A Roundabout homolog 2; KIAA1568 protein, beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.08 E-value=1.4e-09 Score=65.69 Aligned_cols=69 Identities=26% Similarity=0.559 Sum_probs=52.4
Q ss_pred CCCCeEEeCCCccEEeeCCeEEEEcccCCCCCCcEEEEeCCEEecCCC-------CCeeEEeec--CCCCeEEEeeeC
Q psy2441 27 PGFPQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREMLPVDTSR-------NPRYNLLTS--GAPGTYIKIKPN 95 (212)
Q Consensus 27 ~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~k~g~~l~~~~-------~~~~~~~~~--~~~g~~l~i~~~ 95 (212)
..+|.+...+....+.+|+.+.|.|.+.+.|.+.+.|+|++..+.... +..+.+... .|.|.|.|...+
T Consensus 6 ~~~P~i~~~p~~~~v~~G~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n 83 (100)
T 2edj_A 6 SGPPIILQGPANQTLAVDGTALLKCKATGDPLPVISWLKEGFTFPGRDPRATIQEQGTLQIKNLRISDTGTYTCVATS 83 (100)
T ss_dssp CSSCEEEECCCCEEEESSSEEEECCEEECSSCCEEEEEESSSEESSSCSSCEECTTCCEEEESCCTTTCCEEEEEEEC
T ss_pred CCCCEEEeCcCCEEEcCCCcEEEEEEEEEcCCCEEEEEECCEECCCCCCCEEEcCCCEEEEccCCcccCEEEEEEEEc
Confidence 468899889999999999999999999999999999999998876321 122333322 366777776655
No 425
>2lu7_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=99.08 E-value=1.1e-09 Score=64.05 Aligned_cols=66 Identities=12% Similarity=0.145 Sum_probs=50.3
Q ss_pred CCccEEeeCCeEEEEcccCCCCCCcEEEEeCCEEecCCCCCeeEEeecCCCCeEEEeeeCCccceeEEee
Q psy2441 36 PSTKVVEISHTTVLHCSASGNPPPKISWIREMLPVDTSRNPRYNLLTSGAPGTYIKIKPNLFSPLSVYSA 105 (212)
Q Consensus 36 ~~~~~v~~g~~v~l~C~~~~~p~~~v~W~k~g~~l~~~~~~~~~~~~~~~~g~~l~i~~~~~~~~~v~~~ 105 (212)
+.++.+.+|+++.|.|.+.+ |.+.|.|||||.+|... .++.+... +....|.|.++...+...|.+
T Consensus 3 lt~v~~~~G~~v~l~C~vs~-p~p~v~W~k~g~~l~~~--~~~~~~~~-~~~~~L~I~~~~~~D~G~Y~C 68 (84)
T 2lu7_A 3 MTRVRSTPGGDLELVVHLSG-PGGPVRWYKDGERLASQ--GRVQLEQA-GARQVLRVQGARSGDAGEYLC 68 (84)
T ss_dssp CCCEEECTTSCEEEECCCSC-CSTTCEEEETTEECCCC--SSEEEEEC-SSCEEEEESSCSSTTCEEEEE
T ss_pred CeEEEEecCCCEEEEEEECC-CCcEEEEEECCEEcccc--ccEEEeec-CCeEEEEecCCCCcccEEEEE
Confidence 34678899999999999976 88899999999999876 66666654 444557777766666666654
No 426
>2lvc_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=99.07 E-value=6.7e-10 Score=66.02 Aligned_cols=74 Identities=15% Similarity=0.170 Sum_probs=51.2
Q ss_pred CCCeEEeCCCccEE--eeCCeEEEEcccCCCCCCcEEEEeCCEEecCCCCCeeEEeecCCCCeEEEeeeCCccceeEEee
Q psy2441 28 GFPQITEAPSTKVV--EISHTTVLHCSASGNPPPKISWIREMLPVDTSRNPRYNLLTSGAPGTYIKIKPNLFSPLSVYSA 105 (212)
Q Consensus 28 ~~p~~~~~~~~~~v--~~g~~v~l~C~~~~~p~~~v~W~k~g~~l~~~~~~~~~~~~~~~~g~~l~i~~~~~~~~~v~~~ 105 (212)
.||.+..++.+..+ .+|+.+.|.|.+.+ |.+.+.|||||.+|... .++.+... +....|.|.++...+...|.+
T Consensus 3 ~P~~i~~p~~~~~v~~~~g~~v~l~C~v~~-p~~~v~W~k~g~~i~~~--~~~~i~~~-~~~~~L~I~~v~~~D~G~Y~C 78 (91)
T 2lvc_A 3 MPVHIVDPREHVFVHAITSECVMLACEVDR-EDAPVRWYKDGQEVEES--DFVVLENE-GPHRRLVLPATQPSDGGEFQC 78 (91)
T ss_dssp CCCCCCBCCSCEEEECCTTCCEEEEEECSC-TTSCCEEEETTSCCCCC--SSCEEEEE-TTEEEEEESSCCGGGCSEEEE
T ss_pred CCcEEeccCCCeEEEEECCCcEEEEEEECC-CCcEEEEEECCEEeeee--eeeeEEec-CCeEEEEeCCCChhhcEEEEE
Confidence 45666555555444 57999999999966 88889999999999876 66666554 333456666665555555543
No 427
>4f80_A Butyrophilin subfamily 3 member A1; B7 superfamily, CD277, immune system; 1.94A {Homo sapiens} PDB: 4f9l_A* 4f9p_A 4f8t_A 4f8q_A
Probab=99.07 E-value=3.6e-09 Score=73.64 Aligned_cols=85 Identities=21% Similarity=0.309 Sum_probs=58.0
Q ss_pred cceeEecCCcEEEEEeeeeCCCC---ceEEEeCCEEe-----------cCC----CCCceEEcCC---CCceeEEEcCCC
Q psy2441 120 STKVVEISHTTVLHCSASGNPPP---KISWIREMLPV-----------DTS----RNPRYNLLTS---GAPGALQITNSI 178 (212)
Q Consensus 120 ~~~~~~~g~~~~l~C~~~~~p~~---~i~W~~~~~~~-----------~~~----~~~~~~~~~~---~~~~~l~i~~~~ 178 (212)
....+.+|+++.|.|.+.+.+.+ .|.|++++... ... ...++..... .+...|.|.+++
T Consensus 12 ~pV~v~~G~~v~L~C~v~~~~~~~~~~V~W~k~~~~~~v~~~~~g~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~ 91 (226)
T 4f80_A 12 GPILAMVGEDADLPCHLFPTMSAETMELKWVSSSLRQVVNVYADGKEVEDRQSAPYRGRTSILRDGITAGKAALRIHNVT 91 (226)
T ss_dssp SCEEEETTSCEEEEEEEESCCCCTTSEEEEEETTTCCEEEEEETTEECGGGSCTTTTTTEEEECTTGGGTEEEEEESSCC
T ss_pred CCEEEEcCCcEEEEEEEECCCCCCceEEEEEECCCCceEEEEeCCeEcccccCccccceEEEecccccCCeEEEEEeeCc
Confidence 34668899999999999876654 68999875321 111 1122322221 123689999999
Q ss_pred CCCCeeEEEEEEcccccceecceEEEE
Q psy2441 179 EEDQGKYECVAENEVGTEYSPSTMLYV 205 (212)
Q Consensus 179 ~~d~g~y~C~a~n~~g~~~~~~~~l~v 205 (212)
.+|+|.|.|.|.|..|..... +.+.+
T Consensus 92 ~~D~G~Y~C~a~n~~~~~~~~-v~~~~ 117 (226)
T 4f80_A 92 ASDSGKYLCYFQDGDFYEKAL-VELKV 117 (226)
T ss_dssp GGGCEEEEEEEEETTEEEEEE-EEEEE
T ss_pred hHHCeeEEEEEECCCcEEEEE-EEEee
Confidence 999999999999988776544 44433
No 428
>1nkr_A P58-CL42 KIR; inhibitory receptor, natural killer cells, immunological receptors, immunoglobulin fold; 1.70A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1m4k_A 1efx_D 2dli_A 2dl2_A 3h8n_A
Probab=99.06 E-value=4.8e-10 Score=76.75 Aligned_cols=93 Identities=18% Similarity=0.212 Sum_probs=61.9
Q ss_pred CccccCCcceeEecCCcEEEEEeeeeCCCCceEEEeCCEEecCCCCCceEEcCCCCceeEEEcCCCCCCCeeEEEEEEcc
Q psy2441 113 PQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREMLPVDTSRNPRYNLLTSGAPGALQITNSIEEDQGKYECVAENE 192 (212)
Q Consensus 113 p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~n~ 192 (212)
|.+...+. ..+.+|+.+.|.|.+. .+.+.+.|+|++..+..... ............|.|.+++.+|+|.|.|.+.|.
T Consensus 9 P~i~~~p~-~~v~~G~~v~L~C~~~-~~~~~~~w~k~g~~~~~~~~-~~~~~~~~~~~~l~I~~v~~~D~G~Y~C~a~~~ 85 (201)
T 1nkr_A 9 PSLLAHPG-PLVKSEETVILQCWSD-VMFEHFLLHREGMFNDTLRL-IGEHHDGVSKANFSISRMTQDLAGTYRCYGSVT 85 (201)
T ss_dssp CEEEEESC-SEEETTCCEEEEEEES-SCCSEEEEEEESSSCEEEEE-ECEEETTEEEEEEEESSCCGGGCEEEEEEEEBT
T ss_pred CeEEEEcC-CccCCCCcEEEEEecc-CCCCEEEEEECCCcCCccee-eeecCCCCceEEEEeccCCcccCeEEEEeEecC
Confidence 66665555 5688999999999996 46779999998865432100 000111111278999999999999999999865
Q ss_pred cc----cceecceEEEEecc
Q psy2441 193 VG----TEYSPSTMLYVKGT 208 (212)
Q Consensus 193 ~g----~~~~~~~~l~v~~~ 208 (212)
.+ ...+..+.|.|.+.
T Consensus 86 ~~~~~~~~~s~~~~l~V~~~ 105 (201)
T 1nkr_A 86 HSPYQVSAPSDPLDIVIIGL 105 (201)
T ss_dssp TBTTCCCCCCCCEEEEEECS
T ss_pred CCCccccCCCCCEEEEeecc
Confidence 31 22223367777653
No 429
>1dlf_L Anti-dansyl immunoglobulin IGG2A(S); FV fragment; 1.45A {Mus musculus} SCOP: b.1.1.1 PDB: 1wz1_L* 2dlf_L 1maj_A 1mak_A 1ktr_L 2cju_L* 2uud_K* 1dsf_L 3nn8_B 1n4x_L 1bfv_L* 1cfv_L* 2bfv_L* 1wt5_C
Probab=99.06 E-value=1.8e-09 Score=66.96 Aligned_cols=90 Identities=21% Similarity=0.336 Sum_probs=58.9
Q ss_pred cCCcceeEecCCcEEEEEeeeeCC-----CCceEEEeCC--EE---ec-------CCCCCceEEcCCCCceeEEEcCCCC
Q psy2441 117 EAPSTKVVEISHTTVLHCSASGNP-----PPKISWIREM--LP---VD-------TSRNPRYNLLTSGAPGALQITNSIE 179 (212)
Q Consensus 117 ~~~~~~~~~~g~~~~l~C~~~~~p-----~~~i~W~~~~--~~---~~-------~~~~~~~~~~~~~~~~~l~i~~~~~ 179 (212)
..+....+.+|+.+.|.|.+.+.+ .+.+.|++.. .. +- .....|+..........|.|.++..
T Consensus 6 q~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~L~I~~v~~ 85 (113)
T 1dlf_L 6 QTPLSLPVSLGNQASISCRSSQSLVHSNGNTYLHWYLQKPGQSPKLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISRVEA 85 (113)
T ss_dssp EECSEEEECTTCCEEEEEEESSCCBCTTSCBCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEECSCCG
T ss_pred EeCCEEEEcCCCCEEEEEEccccccccCCCceEEEEEECCCCCCeEEEEecCccCCCCCCCEEEEccCCEEEEEECCCCh
Confidence 345567788999999999997765 3689999843 11 10 0113455443333346899999999
Q ss_pred CCCeeEEEEEEcccccceecceEEEEe
Q psy2441 180 EDQGKYECVAENEVGTEYSPSTMLYVK 206 (212)
Q Consensus 180 ~d~g~y~C~a~n~~g~~~~~~~~l~v~ 206 (212)
+|+|.|.|.+.+...........|.|+
T Consensus 86 ~DsG~Y~C~~~~~~~~~fg~gT~l~V~ 112 (113)
T 1dlf_L 86 EDLGVYFCSQSTHVPFTFGSGTKLEIK 112 (113)
T ss_dssp GGCEEEEEEECSSSSCEECCCEEEEEC
T ss_pred HHCEEEEEEEecCCCcEECCCEEEEEc
Confidence 999999999987532222222455553
No 430
>2ywz_A NEW antigen receptor variable domain; IG VNAR, immune system; 2.21A {Orectolobus maculatus} PDB: 2ywy_A
Probab=99.06 E-value=1.1e-09 Score=67.62 Aligned_cols=74 Identities=23% Similarity=0.385 Sum_probs=53.1
Q ss_pred CCcceeEecCCcEEEEEeeeeC--CCCceEEEeCC--EEe--cCCCCCceEEc--CCCCceeEEEcCCCCCCCeeEEEEE
Q psy2441 118 APSTKVVEISHTTVLHCSASGN--PPPKISWIREM--LPV--DTSRNPRYNLL--TSGAPGALQITNSIEEDQGKYECVA 189 (212)
Q Consensus 118 ~~~~~~~~~g~~~~l~C~~~~~--p~~~i~W~~~~--~~~--~~~~~~~~~~~--~~~~~~~l~i~~~~~~d~g~y~C~a 189 (212)
.+....+.+|+++.|.|.+.+. +.+.+.|+++. ... ......++... .......|.|.++..+|+|.|.|.+
T Consensus 6 ~p~~~~~~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~ 85 (111)
T 2ywz_A 6 TPRTITKETGESLTIKCVLKDHSCGLSSTTWYRTQLGSTNEKTISIGGRYDETVDKGSKSFSLRISDLRVEDSGTYKCQA 85 (111)
T ss_dssp ECSEEEECTTCCEEEEEEEESCSSCCCEEEEEEEETTCCCCEECCSBTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEE
T ss_pred CCCcEEEccCCCEEEEeEECCCCCCCCEEEEEEeCCCCCceEeeEeCCCEEEEEeCCCCEEEEEECCCChhcCEEEEEEE
Confidence 4556778899999999999776 56799999852 211 01112455432 2223478999999999999999999
Q ss_pred Ec
Q psy2441 190 EN 191 (212)
Q Consensus 190 ~n 191 (212)
.|
T Consensus 86 ~~ 87 (111)
T 2ywz_A 86 DY 87 (111)
T ss_dssp EE
T ss_pred Ec
Confidence 98
No 431
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.06 E-value=6.3e-11 Score=88.01 Aligned_cols=91 Identities=19% Similarity=0.287 Sum_probs=69.7
Q ss_pred CCccccCCcceeEecCCcEEEEEeeeeCCCCceEEEeCCEEecCCCCCceEEcCCCCceeEEEcCCCCCCCe-eEEEEEE
Q psy2441 112 FPQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREMLPVDTSRNPRYNLLTSGAPGALQITNSIEEDQG-KYECVAE 190 (212)
Q Consensus 112 ~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g-~y~C~a~ 190 (212)
+|.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+... ..+. .....+.|.|.+++.+|.| .|.|.|.
T Consensus 158 ~P~i~~~~~~~~v~~G~~v~L~C~~~g~p~p~i~W~~~~~~~~~~-~~~~---~~~~~~~L~i~~v~~~D~G~~Y~C~a~ 233 (347)
T 2ifg_A 158 VPTLKVQVPNASVDVGDDVLLRCQVEGRGLEQAGWILTELEQSAT-VMKS---GGLPSLGLTLANVTSDLNRKNVTCWAE 233 (347)
T ss_dssp CCEEEEECCSSCCBTTCCEEEEEEEECSSCCCCCEEESCCCSSEE-ECCC---CCSSEEEEEEESCCSTTTTCCEEECCE
T ss_pred CCceeccCCceEEeCCCcEEEEEEEecCCCCEEEEEcCCceeecc-cccc---eecccceEEEeeCChHHCCCeEEEEEE
Confidence 477777777778899999999999999999999999988654332 0111 1112379999999999999 9999999
Q ss_pred cccccceecceEEEEec
Q psy2441 191 NEVGTEYSPSTMLYVKG 207 (212)
Q Consensus 191 n~~g~~~~~~~~l~v~~ 207 (212)
|..|..... +.+.|..
T Consensus 234 n~~g~~~~~-~~l~V~~ 249 (347)
T 2ifg_A 234 NDVGRAEVS-VQVNVSF 249 (347)
T ss_dssp ETTEECCEE-ECCCCBE
T ss_pred cCCCCEEEE-EEEEEcC
Confidence 998887554 5555543
No 432
>3tv3_L PGT128 light chain, IG lambda-2 chain C regions; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_L* 3twc_L* 3tnm_L 2mcg_1 1mcw_M 1a8j_L 3mcg_1 1dcl_A 1mcb_A* 1mcc_A* 1mcd_A* 1mce_A* 1mcf_A* 1mch_A 1mci_A* 1mcj_A* 1mck_A 1mcl_A* 1mcn_A* 1mcq_A ...
Probab=99.06 E-value=7.7e-10 Score=76.14 Aligned_cols=89 Identities=17% Similarity=0.267 Sum_probs=61.7
Q ss_pred cccCCcceeEecCCcEEEEEeeeeCCCCceEEEeC--CEEec---C-------CCCCceEEcCCCCceeEEEcCCCCCCC
Q psy2441 115 ITEAPSTKVVEISHTTVLHCSASGNPPPKISWIRE--MLPVD---T-------SRNPRYNLLTSGAPGALQITNSIEEDQ 182 (212)
Q Consensus 115 ~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~--~~~~~---~-------~~~~~~~~~~~~~~~~l~i~~~~~~d~ 182 (212)
+...+ ...+.+|+.+.|.|.+. +.+.+.|+++ +.... . ....++.........+|.|.+++.+|+
T Consensus 4 v~~~~-~~~v~~G~~v~L~C~~~--~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~ 80 (211)
T 3tv3_L 4 LTQPP-SASGSPGQSITISCTGT--SNNFVSWYQQHAGKAPKLVIYDVNKRPSGVPDRFSGSKSGNTASLTVSGLQTDDE 80 (211)
T ss_dssp CBCCS-EEEECTTCEEEEEEECC--CSSCEEEEEECTTSCCEEEEBTTTBCCTTSCTTEEEEEETTEEEEEEESCCGGGC
T ss_pred EEeCc-eEEEcCCCCEEEEEEEC--CCCeEEEEEECCCCCCEEEEEEecccCCCCcCcEEEEccCCEEEEEECCCChhHC
Confidence 33344 67788999999999998 8889999984 22111 0 012345443333347899999999999
Q ss_pred eeEEEEEEcccc-cceecceEEEEe
Q psy2441 183 GKYECVAENEVG-TEYSPSTMLYVK 206 (212)
Q Consensus 183 g~y~C~a~n~~g-~~~~~~~~l~v~ 206 (212)
|.|.|.+.|..| ........|.|.
T Consensus 81 G~Y~C~~~~~~~~~~~~~~~~l~V~ 105 (211)
T 3tv3_L 81 AVYYCGSLVGNWDVIFGGGTKLTVL 105 (211)
T ss_dssp EEEEEEEEETTTEEEECCCEEEEEC
T ss_pred EEEEEEEecCCCceeECCCceEEEe
Confidence 999999999877 222222677776
No 433
>2yuz_A Myosin-binding protein C, SLOW-type; immunoglobulin domain, SLOW-type myosin-binding protein C, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.05 E-value=8.2e-10 Score=66.89 Aligned_cols=73 Identities=18% Similarity=0.241 Sum_probs=52.9
Q ss_pred CCCCeEEeCCCccEEeeCCeEEEEcccCCCCCCcEEEEeCCEEecCCCCCeeEEeecCCCCeEEEeeeCCccceeEEe
Q psy2441 27 PGFPQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREMLPVDTSRNPRYNLLTSGAPGTYIKIKPNLFSPLSVYS 104 (212)
Q Consensus 27 ~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~k~g~~l~~~~~~~~~~~~~~~~g~~l~i~~~~~~~~~v~~ 104 (212)
..+|.|...+.+..+.+|+.+.|.|.+ .|.+.+.|||+|.+|... .++.+... +....|.|.++...+...|.
T Consensus 5 ~~p~~~~~~~~~~~v~~G~~v~l~C~v--~p~p~v~W~k~g~~l~~~--~r~~i~~~-~~~~~L~I~~v~~~D~G~Y~ 77 (100)
T 2yuz_A 5 SSGLKILTPLTDQTVNLGKEICLKCEI--SENIPGKWTKNGLPVQES--DRLKVVQK-GRIHKLVIANALTEDEGDYV 77 (100)
T ss_dssp SCCCCCSBCCCCEEEETTSCCCEEEEC--SSCCCEEEEETTEECCCC--SSEEEEEC-SSEEEEEESSCCGGGCSEEE
T ss_pred CCCCEEeccCCceEEcCCCCEEEEEEe--CCCCeEEEEECCEECCCC--CcEEEEEe-CCEEEEEECCCChhhCEEEE
Confidence 356788888899999999999999999 788899999999999875 66655543 22234555554444444443
No 434
>2ptt_A CD48 antigen; CD244, CD48, NK cell receptor, X-RAY, immune system; 1.63A {Mus musculus} PDB: 2ptv_A
Probab=99.05 E-value=2.5e-09 Score=65.91 Aligned_cols=84 Identities=21% Similarity=0.222 Sum_probs=57.8
Q ss_pred cceeEecCCcEEEEEee-eeCCCCceEEEeCC-EEec------------CCCCCceEEcCCCCceeEEEcCCCCCCCeeE
Q psy2441 120 STKVVEISHTTVLHCSA-SGNPPPKISWIREM-LPVD------------TSRNPRYNLLTSGAPGALQITNSIEEDQGKY 185 (212)
Q Consensus 120 ~~~~~~~g~~~~l~C~~-~~~p~~~i~W~~~~-~~~~------------~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y 185 (212)
....+.+|+++.|.|.. .+.+.+.+.|++.. ..+. .....|+.+... ...|.|.+++.+|+|.|
T Consensus 11 ~~v~~~~G~~v~L~C~~~~~~~~~~v~W~~~~~~~i~~~~~~~~~~~~~~~~~~R~~~~~~--~~sL~I~~v~~~DsG~Y 88 (110)
T 2ptt_A 11 PDINAYTGSNVTLKIHKDPLGPYRRITWLHTKNQKILEYNYNSTKTIFESEFKGRVYLEEN--NGALHISNVRKEDKGTY 88 (110)
T ss_dssp CSEEEETTSCEEECSCSSCCCSCSEEEEEESTTBEEEEEETTSCEEECSSTTTTTEEECTT--TCCEEESSCCGGGCEEE
T ss_pred CCEEEecCCcEEEeCCccCCCCcCEEEEEecCCccEEEEECCCCceeeccccCCcEEEeCC--CccEEECCCCcccCeEE
Confidence 34678899999999998 66777899999842 2111 001235555422 37899999999999999
Q ss_pred EEEEEcccccceecceEEEEec
Q psy2441 186 ECVAENEVGTEYSPSTMLYVKG 207 (212)
Q Consensus 186 ~C~a~n~~g~~~~~~~~l~v~~ 207 (212)
.|.+.+.. ..... +.|.|.+
T Consensus 89 ~C~v~~~~-~~~~~-~~L~V~d 108 (110)
T 2ptt_A 89 YMRVLRET-ENELK-ITLEVFD 108 (110)
T ss_dssp EEEEESSS-BCCEE-EEEEEEC
T ss_pred EEEEEcCC-CcEEE-EEEEEEc
Confidence 99998765 22223 5565543
No 435
>1ntl_A CRRY-IG; immunology, complement, glycoprotein, SCR, CCP, immune system; NMR {Mus musculus}
Probab=99.04 E-value=7.9e-09 Score=81.40 Aligned_cols=159 Identities=18% Similarity=0.260 Sum_probs=89.4
Q ss_pred CCCccE-EeeCCeEEEEcccCCCCC----CcEEEEeCCEEecCC--------CCCeeEEee--------cCCCCeEEEee
Q psy2441 35 APSTKV-VEISHTTVLHCSASGNPP----PKISWIREMLPVDTS--------RNPRYNLLT--------SGAPGTYIKIK 93 (212)
Q Consensus 35 ~~~~~~-v~~g~~v~l~C~~~~~p~----~~v~W~k~g~~l~~~--------~~~~~~~~~--------~~~~g~~l~i~ 93 (212)
.+.... +..+....|.|.+.+..+ ..|+||+++..+... .+..+.+.. ..+.+.|.|..
T Consensus 348 ~~~~~~~~~~~~~~~l~C~~~~~~p~~~~i~v~W~~~~~~~~~~~t~~~~~~~n~~~~~~s~L~i~~~~~~~~~~y~C~v 427 (551)
T 1ntl_A 348 PPKPKDVLTITLTPKVTCVVVDISKDDPEVQFSWFVDDVEVHTAQTQPREEQFNSTFRSVSELPIMHQDWLNGKEFKCRV 427 (551)
T ss_pred CCCcccceeeccCcceEEEEEecccCCCceEEEEEECCccccccccCCceECCCCeEEEEEeeEcCHHHccCCceEEEEE
Confidence 334344 667889999999977543 479999998765422 122322211 12455677776
Q ss_pred eCCccc--e--eEEeecCCCCCCCccccCCcceeEecCCcEEEEEeeeeC-CC-CceEEEeCCEEecCCCCCceEEcCCC
Q psy2441 94 PNLFSP--L--SVYSADKIPPGFPQITEAPSTKVVEISHTTVLHCSASGN-PP-PKISWIREMLPVDTSRNPRYNLLTSG 167 (212)
Q Consensus 94 ~~~~~~--~--~v~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~-p~-~~i~W~~~~~~~~~~~~~~~~~~~~~ 167 (212)
+..... + .+.... ....+|.+...+....+..|+.+.|.|.+.+. |. ..|.|++++..+............++
T Consensus 428 ~~~~~~~~~~~~~~~~~-~~~~~P~V~~~~~~~~~~~~~~~~L~C~v~gfyP~~i~v~W~k~g~~~~~~~~~~~~~~~dg 506 (551)
T 1ntl_A 428 NSAAFPAPIEKTISKTK-GRPKAPQLYTIPPPKEQMAKDKVSLTCMITDFFPEDITVEWQWNGQPAENYKNTQPIMNTNG 506 (551)
T ss_pred ecCCCCCCeEEEEecCC-CCCcCCceEEeCCChhhccCCceEEEEEEEEeECCCCEEEEEECCEEccCceeccceeCCCC
Confidence 653221 1 111111 11223554433322234468899999999884 44 48999999988753211111111121
Q ss_pred C---ceeEEEcCCCCCCCeeEEEEEEcccc
Q psy2441 168 A---PGALQITNSIEEDQGKYECVAENEVG 194 (212)
Q Consensus 168 ~---~~~l~i~~~~~~d~g~y~C~a~n~~g 194 (212)
. .+.|.+......+.+.|+|.+.+..-
T Consensus 507 ty~~~s~l~v~~~~~~~~~~ytC~V~h~~l 536 (551)
T 1ntl_A 507 SYFVYSKLNVQKSNWEAGNTFTCSVLHEGL 536 (551)
T ss_pred CEEEEEEEEEcHHHcCCCCeEEEEEEECCC
Confidence 1 13355555555568899999988643
No 436
>3ry4_A Low affinity immunoglobulin gamma FC region recep; FC receptor, CD32, immunoglobulin superfamily, low responder polymorphism, cell membrane; HET: NAG; 1.50A {Homo sapiens} PDB: 1fcg_A 3ry5_A 1h9v_A 3d5o_F* 3ry6_C* 2fcb_A
Probab=99.04 E-value=1.1e-09 Score=72.79 Aligned_cols=80 Identities=19% Similarity=0.287 Sum_probs=62.1
Q ss_pred CccccCCcceeEecCCcEEEEEeeeeCC-CCceEEEeCCEEecCCCCCceEEcCCCCceeEEEcCCCCCCCeeEEEEEEc
Q psy2441 113 PQITEAPSTKVVEISHTTVLHCSASGNP-PPKISWIREMLPVDTSRNPRYNLLTSGAPGALQITNSIEEDQGKYECVAEN 191 (212)
Q Consensus 113 p~~~~~~~~~~~~~g~~~~l~C~~~~~p-~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~n 191 (212)
|.+...+....+.+|+.+.|.|.+.+.| .+.+.|++++..+... . ..+.+.+++.+|.|.|.|.+.|
T Consensus 5 p~i~~~p~~~~v~~G~~v~l~C~~~~~p~~~~~~W~~~g~~~~~~---------~---~~~~~~~~~~~d~G~Y~C~~~~ 72 (170)
T 3ry4_A 5 AVLKLEPPWINVLQEDSVTLTCQGARSPESDSIQWFHNGNLIPTH---------T---QPSYRFKANNNDSGEYTCQTGQ 72 (170)
T ss_dssp CEEEEESCCSEEETTCEEEEEEESCCCSSSSCEEEEETTEECTTC---------C---SSEEEEECCGGGCEEEEEEETT
T ss_pred CEEEeCCCCeEEECCCcEEEEEEecCCCCcceEEEEECCeEcccC---------c---cceEEEecccccCeEEEEEEeC
Confidence 4555566666788999999999999887 5799999999887653 1 4567788999999999999998
Q ss_pred ccccceecceEEEEec
Q psy2441 192 EVGTEYSPSTMLYVKG 207 (212)
Q Consensus 192 ~~g~~~~~~~~l~v~~ 207 (212)
..+.. . +.|.|..
T Consensus 73 ~~~s~--~-~~l~v~~ 85 (170)
T 3ry4_A 73 TSLSD--P-VHLTVLF 85 (170)
T ss_dssp SBCCC--C-EEEEEEC
T ss_pred CCceE--e-EEEEEEC
Confidence 54433 3 6666654
No 437
>1ccz_A Protein (CD58); LFA-3, glycoprotein; HET: NAG; 1.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1ci5_A 1qa9_B
Probab=99.04 E-value=8.9e-10 Score=73.53 Aligned_cols=81 Identities=22% Similarity=0.248 Sum_probs=59.7
Q ss_pred eeEecCCcEEEEEeeeeCCCCceEEEeCCEEecCC----------CCCceEEcCCCCceeEEEcCCCCCCCeeEEEEEEc
Q psy2441 122 KVVEISHTTVLHCSASGNPPPKISWIREMLPVDTS----------RNPRYNLLTSGAPGALQITNSIEEDQGKYECVAEN 191 (212)
Q Consensus 122 ~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~----------~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~n 191 (212)
..+..|+++.|.|.+. .|.+.|.|++++..+... ...|+.+...+ ++|.|.+++.+|+|.|.|.+.|
T Consensus 5 v~~~~G~~VtL~c~~~-~~~~~i~W~~~~~~i~~~~~~~~~~~~~~~~R~~~~~~~--~sL~I~~v~~~DsG~Y~C~~~n 81 (171)
T 1ccz_A 5 IYGVVYGNVTFHVPSN-VPLKEVLWKKQKDKVAELENSEFRAFSSFKNRVYLDTVS--GSLTIYNLTSSDEDEYEMESPN 81 (171)
T ss_dssp EEEETTCCEEECCCCS-SCCSCEEEEETTEEEEEEETTEEEECGGGTTSEEECTTT--CCEEECSCCGGGCEEEEEECTT
T ss_pred EEEEcCCCEEEcCCCC-CCcceEEEEeCCcEEEEEcCCCcccccccCCcEEEeCCC--CeEEECCCChhhCceEEEEEeC
Confidence 4577899999999984 478899999987643211 12344443222 7899999999999999999999
Q ss_pred ccccceecceEEEEecc
Q psy2441 192 EVGTEYSPSTMLYVKGT 208 (212)
Q Consensus 192 ~~g~~~~~~~~l~v~~~ 208 (212)
..| ... +.|.|.++
T Consensus 82 ~~~--~~~-~~L~V~~~ 95 (171)
T 1ccz_A 82 ITD--TMK-FFLYVLEM 95 (171)
T ss_dssp CCS--CEE-EEEEEECC
T ss_pred CCC--cEE-EEEEEECc
Confidence 877 333 67777654
No 438
>3kg5_A B-cell antigen receptor complex-associated protei chain; CD79B, IG-beta, BCR, immunoglobulin domain, protein binding; 3.20A {Homo sapiens}
Probab=99.04 E-value=2.6e-09 Score=68.10 Aligned_cols=94 Identities=20% Similarity=0.222 Sum_probs=63.5
Q ss_pred cccCCcceeEecCCcEEEEEeeeeCCCCceEEEeC---CEEecC--CCCCceEEcCCCCceeEEEcCCCCCCCeeEEEEE
Q psy2441 115 ITEAPSTKVVEISHTTVLHCSASGNPPPKISWIRE---MLPVDT--SRNPRYNLLTSGAPGALQITNSIEEDQGKYECVA 189 (212)
Q Consensus 115 ~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~---~~~~~~--~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~a 189 (212)
+...+....+.+|+.+.|.|.+.+. ...+.|++. +..... ....++....+.....|.|.++..+|+|.|.|.+
T Consensus 21 v~Q~p~~~~v~~G~svtL~C~~s~~-~~~v~Wyrq~~~g~~~~~l~~~~~rf~~~~~~~~~~L~I~~~~~~Dsg~Y~C~~ 99 (134)
T 3kg5_A 21 IWQSPRFIARKRGFTVKMHCYMNSA-SGNVSWLWKQEMDENPQQLKLEKGRMEESQNESLATLTIQGIRFEDNGIYFCQQ 99 (134)
T ss_dssp CEEECSEEEEETTCCEEEEEECCCT-TCCCEEEEESSSSSCCEECCCCTTTEEEEECSSEEEEEECSCCTTTCEEEEEEE
T ss_pred EEEeCCEEEEeCCCCEEEEEEECCC-CceEEEEEECCCCCCcEEEEEECCeEEEEccCCEEEEEECCCCcCcCEEEEEEE
Confidence 3445566788999999999999765 468999986 322211 1234565544444578999999999999999999
Q ss_pred Ecccc-c-ceecceEEEEecce
Q psy2441 190 ENEVG-T-EYSPSTMLYVKGTQ 209 (212)
Q Consensus 190 ~n~~g-~-~~~~~~~l~v~~~~ 209 (212)
.+..+ . .......|.|...+
T Consensus 100 ~~~~~~~~~fg~GT~L~V~~~p 121 (134)
T 3kg5_A 100 KCNNTSEVYQGCGTELRVMGFS 121 (134)
T ss_dssp ECTTTCCEEECCCEEEEEECC-
T ss_pred EcCCCCceEECCCEEEEEecCC
Confidence 87632 1 11222667776644
No 439
>2q87_A CMRF35-H antigen; all-beta, immunoglobulin, IG-superfamily, IG-V, NKP44-like, natural killer cell IG-like receptor, inhibitory receptor; 1.70A {Homo sapiens}
Probab=99.04 E-value=1e-09 Score=67.69 Aligned_cols=90 Identities=20% Similarity=0.229 Sum_probs=58.7
Q ss_pred cceeEecCCcEEEEEeeeeCC-CCceEEEeCCEE--ec----CC-----CCCceEEcC--CCCceeEEEcCCCCCCCeeE
Q psy2441 120 STKVVEISHTTVLHCSASGNP-PPKISWIREMLP--VD----TS-----RNPRYNLLT--SGAPGALQITNSIEEDQGKY 185 (212)
Q Consensus 120 ~~~~~~~g~~~~l~C~~~~~p-~~~i~W~~~~~~--~~----~~-----~~~~~~~~~--~~~~~~l~i~~~~~~d~g~y 185 (212)
....+.+|+++.|.|...... ...+.|++.... .. .. ...|+.... ......|.|.++..+|+|.|
T Consensus 4 ~~v~~~~G~~v~L~C~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~~~~~DsG~Y 83 (110)
T 2q87_A 4 RTVAGPVGGSLSVQCPYEKEHRTLNKYWCRPPQIFLCDKIVETKGSAGKRNGRVSIRDSPANLSFTVTLENLTEEDAGTY 83 (110)
T ss_dssp EEEEECTTSCEEEEEECCGGGTTSEEEEESCCSSSSCCCSEESSSTTCSEETTEEEEEEGGGTEEEEEESSCCGGGCEEE
T ss_pred cEEEEeCCCcEEEEeEecCCcCCceEEEEecCCCCCCeEEEEeCCccccccCCEEEEEcCcCCEEEEEEccCCHHHCEEE
Confidence 345688899999999986643 368999986421 10 00 123444432 22246899999999999999
Q ss_pred EEEEEccc-ccceecceEEEEecce
Q psy2441 186 ECVAENEV-GTEYSPSTMLYVKGTQ 209 (212)
Q Consensus 186 ~C~a~n~~-g~~~~~~~~l~v~~~~ 209 (212)
.|.+.+.. |........+.|.+.+
T Consensus 84 ~C~~~~~~~g~~~~~~~~v~v~V~p 108 (110)
T 2q87_A 84 WCGVDTPWLQDFHDPVVEVEVSVFP 108 (110)
T ss_dssp EEEEECTTSCCBCCCSEEEEEEEC-
T ss_pred EEEEecCccCccCCccEEEEEEEec
Confidence 99999875 4112222666666654
No 440
>2yr3_A Myosin light chain kinase, smooth muscle; IG domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.04 E-value=4e-10 Score=68.05 Aligned_cols=71 Identities=24% Similarity=0.420 Sum_probs=54.0
Q ss_pred cCCCCCeEEeCCCccEEeeCCeEEEEcccCCCCCCcEEEEeCCEEecCCCC------CeeEEeec--CCCCeEEEeeeC
Q psy2441 25 IPPGFPQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREMLPVDTSRN------PRYNLLTS--GAPGTYIKIKPN 95 (212)
Q Consensus 25 ~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~k~g~~l~~~~~------~~~~~~~~--~~~g~~l~i~~~ 95 (212)
.+..+|.+...+....+.+|+.+.|.|.+.+.|.+.+.|+|+|..+..... ..+.+... +|.|.|.|...+
T Consensus 7 ~~~~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N 85 (99)
T 2yr3_A 7 GMEVAPSFSSVLKDCAVIEGQDFVLQCSVRGTPVPRITWLLNGQPIQYARSTCEAGVAELHIQDALPEDHGTYTCLAEN 85 (99)
T ss_dssp CCCEEEEEEECCCCEEECTTCCEEEECEEEEESCCCCEEEESSSBCSSCCCEEETTEEEEEECSCCTTCCBCEEEEEEC
T ss_pred CcccCCceeecCCCCEEeCCCeEEEEEEEeeeCCCeEEEEECCEECcccceEeeCCeEEEEECCCChhhCEEEEEEEEE
Confidence 346789999889999999999999999999999999999999988765410 12222222 367777777665
No 441
>3sbw_C Programmed cell death 1 ligand 1; PD-1, PD-L1, B7-H1, programmed death-1 ligand 1, complex, costimulatory, immune system; 2.28A {Homo sapiens} PDB: 3fn3_A 3bis_A 3bik_A
Probab=99.03 E-value=1.9e-09 Score=74.60 Aligned_cols=89 Identities=24% Similarity=0.314 Sum_probs=61.1
Q ss_pred CCcceeEecCCcEEEEEeeeeCCC-----CceEEEeCCEEecC---------C----CCCceEEcCC---CCceeEEEcC
Q psy2441 118 APSTKVVEISHTTVLHCSASGNPP-----PKISWIREMLPVDT---------S----RNPRYNLLTS---GAPGALQITN 176 (212)
Q Consensus 118 ~~~~~~~~~g~~~~l~C~~~~~p~-----~~i~W~~~~~~~~~---------~----~~~~~~~~~~---~~~~~l~i~~ 176 (212)
.+....+.+|+.+.|.|.+.+.|. +.+.|++++..+.. . ...++.+..+ .+...|.|.+
T Consensus 7 p~~~v~~~~G~~v~L~C~~~~~p~~~~~~~~v~W~~~~~~v~~~~~g~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~ 86 (222)
T 3sbw_C 7 PKDLYVVEYGSNMTIECKFPVEKQLDLAALIVYWEMEDKNIIQFVHGEEDLKVQHSSYRQRARLLKDQLSLGNAALQITD 86 (222)
T ss_dssp SCSEEEEETTSCEEEEEECCCCSSCCTTTCEEEEEETTEEEEEEETTEECSSSSCGGGSSSEEECHHHHTTTEEEEEESS
T ss_pred CCccEEEEcCCcEEEEeEecCCCCCCCccEEEEEEECCcEEEEEeCCccccccccccccCceEEccccccCCEEEEEEcC
Confidence 344567889999999999977663 48999997633311 0 0123333211 1235899999
Q ss_pred CCCCCCeeEEEEEEcccccceecceEEEEecc
Q psy2441 177 SIEEDQGKYECVAENEVGTEYSPSTMLYVKGT 208 (212)
Q Consensus 177 ~~~~d~g~y~C~a~n~~g~~~~~~~~l~v~~~ 208 (212)
++.+|+|.|.|.+.| .|..... +.|.|.++
T Consensus 87 v~~~D~G~Y~C~~~~-~~~~~~~-~~l~V~~~ 116 (222)
T 3sbw_C 87 VKLQDAGVYRCMISY-GGADYKR-ITVKVNAP 116 (222)
T ss_dssp CCGGGCEEEEEEEES-SSEEEEE-EEEEEEBC
T ss_pred cccccCeEEEEEEEe-CCCceeE-EEEEEECC
Confidence 999999999999999 5555544 77777654
No 442
>2pet_A Lutheran blood group glycoprotein; immunoglobulin superfamily., cell adhesion; 1.70A {Homo sapiens} PDB: 2pf6_A
Probab=99.03 E-value=5.5e-10 Score=77.85 Aligned_cols=87 Identities=20% Similarity=0.315 Sum_probs=63.0
Q ss_pred CCcceeEecCCcEEEEEeeeeCCC-CceEEEeCCEEec-----C----C--CCCceE----------EcCCCCceeEEEc
Q psy2441 118 APSTKVVEISHTTVLHCSASGNPP-PKISWIREMLPVD-----T----S--RNPRYN----------LLTSGAPGALQIT 175 (212)
Q Consensus 118 ~~~~~~~~~g~~~~l~C~~~~~p~-~~i~W~~~~~~~~-----~----~--~~~~~~----------~~~~~~~~~l~i~ 175 (212)
.+....+.+|+.+.|.|.+.+.+. +.+.|++++.... . . ...++. ...+ +.|.|.
T Consensus 6 ~p~~~~v~~G~~v~L~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~---~~L~i~ 82 (231)
T 2pet_A 6 VPPLVEVMRGKSVILDCTPTGTHDHYMLEWFLTDRSGARPRLASAEMQGSELQVTMHDTRGRSPPYQLDSQ---GRLVLA 82 (231)
T ss_dssp CCSEEEEETTCCEEECCCCBSCCSEEEEEEEEECTTCCCCEEEEEEEETTEEEEEECCCSCCSSCCEECTT---CCEEES
T ss_pred CCCcEEEEcCCCEEEecccCCCCCceEEEEEEeCCCceeEEEEeccccCCccccccccccccccccccCCC---ceEEEc
Confidence 455677889999999999999885 8999997543311 0 0 012222 3333 459999
Q ss_pred CCCCCCCeeEEEEEEccc-ccceecceEEEEecc
Q psy2441 176 NSIEEDQGKYECVAENEV-GTEYSPSTMLYVKGT 208 (212)
Q Consensus 176 ~~~~~d~g~y~C~a~n~~-g~~~~~~~~l~v~~~ 208 (212)
+++.+|+|.|.|.+.|.. +..... +.|.|...
T Consensus 83 ~v~~~D~G~Y~C~~~~~~~~~~~~~-~~l~V~~~ 115 (231)
T 2pet_A 83 EAQVGDERDYVCVVRAGAAGTAEAT-ARLNVFAK 115 (231)
T ss_dssp SCCGGGCEEEEEEEECGGGCEEEEE-EEEEEEBC
T ss_pred ccCcccCceEEEEEEecCCCceEEE-EEEEEEec
Confidence 999999999999999987 665555 77777654
No 443
>1svz_A Immunoglobulin;, single-chain FV fragment 1696; antibody-antigen complex, HIV inhibiting antibody; 1.89A {Mus musculus} PDB: 1jp5_A
Probab=99.03 E-value=1.6e-09 Score=76.46 Aligned_cols=93 Identities=22% Similarity=0.336 Sum_probs=63.3
Q ss_pred ccCCcceeEecCCcEEEEEeeeeCC-----CCceEEEeCC--EEec----------CCCCCceEEcCCCCceeEEEcCCC
Q psy2441 116 TEAPSTKVVEISHTTVLHCSASGNP-----PPKISWIREM--LPVD----------TSRNPRYNLLTSGAPGALQITNSI 178 (212)
Q Consensus 116 ~~~~~~~~~~~g~~~~l~C~~~~~p-----~~~i~W~~~~--~~~~----------~~~~~~~~~~~~~~~~~l~i~~~~ 178 (212)
...+....+.+|+.+.|.|.+.+.+ .+.+.|+++. .... .....++....+.....|.|.++.
T Consensus 5 ~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~ 84 (247)
T 1svz_A 5 TQTPLYLPVSLGDQASISCRSSQTIVHNNGNTYLEWYLQKPGQSPQLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISRVE 84 (247)
T ss_dssp EEECSEEEECTTCCEEEEEEESSCCBCTTSCBCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCC
T ss_pred EecCCeEEecCCCCEEEEEeCCCcccccCCCceEEEEEECCCCCceEEEEEecccCCCCCCcEEeccCCCEEEEEECCCC
Confidence 3445667788999999999998887 6899999842 1111 001245544433334689999999
Q ss_pred CCCCeeEEEEEEcccccceecceEEEEecc
Q psy2441 179 EEDQGKYECVAENEVGTEYSPSTMLYVKGT 208 (212)
Q Consensus 179 ~~d~g~y~C~a~n~~g~~~~~~~~l~v~~~ 208 (212)
.+|+|.|.|.+.|..+........|.|...
T Consensus 85 ~~D~G~Y~C~~~n~~~~~~~~~~~l~V~~~ 114 (247)
T 1svz_A 85 AEDLGIYYCFQGSHFPPTFGGGTKLEIKGG 114 (247)
T ss_dssp GGGCEEEEEEECSSSSCEECCCEEEEEC--
T ss_pred HHHCEEEEEEEccCCccEECCCEEEEEECC
Confidence 999999999999976543222266666654
No 444
>1hnf_A CD2; T lymphocyte adhesion glycoprotein; HET: NAG; 2.50A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1cdb_A 1gya_A* 1qa9_A
Probab=99.03 E-value=8.9e-10 Score=74.27 Aligned_cols=84 Identities=15% Similarity=0.247 Sum_probs=62.5
Q ss_pred ceeEecCCcEEEEEeee--eCCCCceEEEe--CCEEecC--------CCCCceEEcCCCCceeEEEcCCCCCCCeeEEEE
Q psy2441 121 TKVVEISHTTVLHCSAS--GNPPPKISWIR--EMLPVDT--------SRNPRYNLLTSGAPGALQITNSIEEDQGKYECV 188 (212)
Q Consensus 121 ~~~~~~g~~~~l~C~~~--~~p~~~i~W~~--~~~~~~~--------~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~ 188 (212)
......|+++.|.|... +.+.+.|.|++ ++..+.. ....|+.+..+ ++|.|.+++.+|+|.|.|.
T Consensus 8 ~v~g~~G~sv~L~~~~~~~~~~~~~i~W~k~~~~~~i~~~~~~~~~~~~~~R~~~~~n---gsL~I~~v~~~DsG~Y~c~ 84 (182)
T 1hnf_A 8 ETWGALGQDINLDIPSFQMSDDIDDIKWEKTSDKKKIAQFRKEKETFKEKDTYKLFKN---GTLKIKHLKTDDQDIYKVS 84 (182)
T ss_dssp EEEEETTSCEEECCTTCCCCSSEEEEEEEEGGGCCEEEEECGGGCEEESCTTEEECTT---SCEEECSCCGGGCEEEEEE
T ss_pred EEEEecCCCEEEeCCcccccCcCCEEEEEECCCCcEEEEEeCccCCCCCCCeEEECCC---CCEEECCCChhhCEEEEEE
Confidence 35567899999999653 34567999999 8876621 12466767666 6999999999999999999
Q ss_pred EEccccccee-cceEEEEec
Q psy2441 189 AENEVGTEYS-PSTMLYVKG 207 (212)
Q Consensus 189 a~n~~g~~~~-~~~~l~v~~ 207 (212)
+.|..|.... ..+.|.|.+
T Consensus 85 ~~n~~g~~~~~~~~~L~V~~ 104 (182)
T 1hnf_A 85 IYDTKGKNVLEKIFDLKIQE 104 (182)
T ss_dssp EEETTSCEEEEEEEEEEEEC
T ss_pred EEeCCCceeEEEEEEEEEcC
Confidence 9998887643 225666654
No 445
>3puc_A Titin; I-SET IG-like domain, M-BAND, transferase; 0.96A {Homo sapiens}
Probab=99.03 E-value=1.3e-09 Score=65.72 Aligned_cols=75 Identities=19% Similarity=0.363 Sum_probs=55.7
Q ss_pred CCCCeEEeCCCccEEeeCCeEEEEcccCCCCCCcEEEEeCCEEecCCCCCeeEEeecCCCCeEEEeeeCCccceeEEe
Q psy2441 27 PGFPQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREMLPVDTSRNPRYNLLTSGAPGTYIKIKPNLFSPLSVYS 104 (212)
Q Consensus 27 ~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~k~g~~l~~~~~~~~~~~~~~~~g~~l~i~~~~~~~~~v~~ 104 (212)
..+|.+...+....+.+|+.+.|.|.+.+.|.+.+.|+|+|..+... .++.+... +....|.|.++...+...|.
T Consensus 4 ~~~P~i~~~~~~~~v~~G~~~~l~C~~~g~p~p~v~W~~~g~~~~~~--~~~~~~~~-~~~~~L~i~~~~~~d~G~Y~ 78 (99)
T 3puc_A 4 SSKPVIVTGLQDTTVSSDSVAKFAVKATGEPRPTAIWTKDGKAITQG--GKYKLSED-KGGFFLEIHKTDTSDSGLYT 78 (99)
T ss_dssp CEEEEEEECCCCEEEESSSCEEEEEEEEEESCCEEEEEETTEECCSS--SSEEEEEE-TTEEEEEECSCCGGGCEEEE
T ss_pred CCCCEEEecCccEEEeCCCcEEEEEEEEecCCCEEEEEECCEECcCC--CCEEEEEe-CCEEEEEECCCCcccCEEEE
Confidence 35788888888999999999999999999999999999999998765 66665543 23334555555444444443
No 446
>4dzb_B Vbeta2 (MAIT T cell receptor); immune system; 1.70A {Homo sapiens} PDB: 1ymm_E* 3o4l_E* 3o6f_D 3t0e_D 1ktk_E 3mfg_B 2ij0_E
Probab=99.02 E-value=2.5e-09 Score=75.36 Aligned_cols=80 Identities=15% Similarity=0.298 Sum_probs=57.6
Q ss_pred cccCCcceeEecCCcEEEEEeeeeCCCCceEEEe----------------CCEEecCC-CCCceEEcCC-CCceeEEEcC
Q psy2441 115 ITEAPSTKVVEISHTTVLHCSASGNPPPKISWIR----------------EMLPVDTS-RNPRYNLLTS-GAPGALQITN 176 (212)
Q Consensus 115 ~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~----------------~~~~~~~~-~~~~~~~~~~-~~~~~l~i~~ 176 (212)
+...+....+.+|+.+.|.|.+.+.+.+.+.|++ ++...... ...++....+ ....+|.|.+
T Consensus 4 v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~ 83 (246)
T 4dzb_B 4 VSQHPSWVISKSGTSVKIECRSLDFQATTMFWYRQFPKQSLMLMATSNEGSKATYEQGVEKDKFLINHASLTLSTLTVTS 83 (246)
T ss_dssp EEEECSEEEEETTSCEEEEEEESSSCCCSEEEEEECTTSCCEEEEEECTTSCCEECTTCCGGGEEEEEEETTEEEEEECS
T ss_pred cEECCcEEEEeCCCcEEEEeEecCCCceEEEEEEECCCCCcEEEEEEccCCCceecCcccCCcEEEEecCCCEEEEEECC
Confidence 3445566778899999999999999999999998 22222211 1245544321 2246899999
Q ss_pred CCCCCCeeEEEEEEcccc
Q psy2441 177 SIEEDQGKYECVAENEVG 194 (212)
Q Consensus 177 ~~~~d~g~y~C~a~n~~g 194 (212)
++.+|+|.|.|.+.|..+
T Consensus 84 v~~~D~G~Y~C~~~~~~~ 101 (246)
T 4dzb_B 84 AHPEDSSFYICSARTSGD 101 (246)
T ss_dssp CCGGGCEEEEEEECCSSG
T ss_pred CCHHHCEEEEEEEecCCC
Confidence 999999999999987643
No 447
>1zox_A CLM-1; IG-superfamily, IG-V, NKP44-like, myeloid IG-like receptor, structural genomics, PSI, protein structure initiative; 2.10A {Mus musculus}
Probab=99.02 E-value=2.7e-09 Score=66.10 Aligned_cols=91 Identities=13% Similarity=0.121 Sum_probs=59.2
Q ss_pred CCcceeEecCCcEEEEEeeeeCCC-CceEEEeCCEE-----e-cCC------CCCceEEcC--CCCceeEEEcCCCCCCC
Q psy2441 118 APSTKVVEISHTTVLHCSASGNPP-PKISWIREMLP-----V-DTS------RNPRYNLLT--SGAPGALQITNSIEEDQ 182 (212)
Q Consensus 118 ~~~~~~~~~g~~~~l~C~~~~~p~-~~i~W~~~~~~-----~-~~~------~~~~~~~~~--~~~~~~l~i~~~~~~d~ 182 (212)
.+....+.+|+++.|.|....... ..+.|++.... + ... ...|+.... ......|.|.+++.+|+
T Consensus 7 ~p~~v~~~~G~~v~L~C~~~~~~~~~~v~W~~~~~~~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~~~~~Ds 86 (113)
T 1zox_A 7 GPEEVSGQEQGSLTVQCRYTSGWKDYKKYWCQGVPQRSCKTLVETDASEQLVKKNRVSIRDNQRDFIFTVTMEDLRMSDA 86 (113)
T ss_dssp CCSEEEEETTSCEEEEEEECGGGTTSCEEEEESSSGGGCEEEEECCSSSCCEEETTEEEEEETTTTEEEEEECSCCGGGC
T ss_pred CCCEEEEeCCCcEEEEeECCCCcccceEEEEeCCCCCCCeEEEEecCccccccCCCEEEEECCcCCEEEEEEccCCHHHC
Confidence 344567889999999999976543 36999986421 1 000 123454432 23346899999999999
Q ss_pred eeEEEEEEcccccceecceEEEEecceec
Q psy2441 183 GKYECVAENEVGTEYSPSTMLYVKGTQVD 211 (212)
Q Consensus 183 g~y~C~a~n~~g~~~~~~~~l~v~~~~~p 211 (212)
|.|.|.+.+...... ..+.+.+.+.|
T Consensus 87 G~Y~C~v~~~~~~~~---~~v~L~V~~~p 112 (113)
T 1zox_A 87 GIYWCGITKGGLDPM---FKVTVNIGPVP 112 (113)
T ss_dssp EEEEEEECCSSSCCE---EEEEEEEECC-
T ss_pred EEEEEeeEcCCCCcc---EEEEEEEEcCC
Confidence 999999988643332 44455555544
No 448
>2xzc_L FAB A.17 light chain; immune system; HET: XOP; 1.36A {Homo sapiens} PDB: 2xza_L* 3kdm_L* 3nps_C 1dn0_A 1qlr_A* 2v7n_A 3eo0_A 3eo1_A 2agj_L* 2fx7_L 1tzg_L 2fx8_L 2fx9_L* 1u6a_L 3hi1_L* 3kym_A 3kyk_L 3qwo_L* 3ixt_L* 3qeg_L ...
Probab=99.02 E-value=2.1e-09 Score=74.29 Aligned_cols=89 Identities=21% Similarity=0.329 Sum_probs=59.7
Q ss_pred CcceeEecCCcEEEEEee-eeCC-CCceEEEeCC--EEec----------CCCCCceEEcCCCCceeEEEcCCCCCCCee
Q psy2441 119 PSTKVVEISHTTVLHCSA-SGNP-PPKISWIREM--LPVD----------TSRNPRYNLLTSGAPGALQITNSIEEDQGK 184 (212)
Q Consensus 119 ~~~~~~~~g~~~~l~C~~-~~~p-~~~i~W~~~~--~~~~----------~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~ 184 (212)
|....+.+|+.+.|.|.+ .+.+ .+.+.|++++ .... .....++....+.....|.|.+++.+|+|.
T Consensus 7 p~~~~v~~G~~v~L~C~v~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~ 86 (216)
T 2xzc_L 7 PPSVSAAPGQKVTISCSGSSSNIGNNYVSWYQQLPGTAPKLLIYDNNKRPSGIPDRFSGSKSGTSATLGITGLQTGDEAD 86 (216)
T ss_dssp CSEEEECTTCCEEEEEECCTTTGGGSCCEEEEECTTSCCEEEEBTTTBCCTTCCTTEEEEEETTEEEEEECSCCGGGCEE
T ss_pred CCcEEecCCCeEEEEEEeecCCCCCCeEEEEEeCCCCCcEEEEEecCccCCCCCCceEEeccCCEEEEEECCCCcccCEE
Confidence 555778899999999995 4443 5799999843 1111 111235554433334689999999999999
Q ss_pred EEEEEEcccc-cceecceEEEEec
Q psy2441 185 YECVAENEVG-TEYSPSTMLYVKG 207 (212)
Q Consensus 185 y~C~a~n~~g-~~~~~~~~l~v~~ 207 (212)
|.|.|.|..+ ........|.|..
T Consensus 87 Y~C~~~~~~~~~~~~~~~~l~V~~ 110 (216)
T 2xzc_L 87 YYCGTWDSSLNPVFGGGTKLEIKR 110 (216)
T ss_dssp EEEEEECTTSCEEEBCCEEEEECC
T ss_pred EEEEEEeCCCcceECCCEEEEEcC
Confidence 9999999876 2222225666653
No 449
>3moq_A NEW antigen receptor variable domain, P3(40) PEPT amyloid beta A4 protein; AB-ignar, AB-12Y-2, glycoprotein, membran protease inhibitor; 2.05A {Orectolobus maculatus} PDB: 2z8w_C 2z8v_C 1ves_A 1ver_A
Probab=99.02 E-value=2.9e-09 Score=67.16 Aligned_cols=80 Identities=21% Similarity=0.292 Sum_probs=56.2
Q ss_pred ccCCcceeEecCCcEEEEEeeeeC--CCCceEEEeC--CEEec--CCCCCceEEc--CCCCceeEEEcCCCCCCCeeEEE
Q psy2441 116 TEAPSTKVVEISHTTVLHCSASGN--PPPKISWIRE--MLPVD--TSRNPRYNLL--TSGAPGALQITNSIEEDQGKYEC 187 (212)
Q Consensus 116 ~~~~~~~~~~~g~~~~l~C~~~~~--p~~~i~W~~~--~~~~~--~~~~~~~~~~--~~~~~~~l~i~~~~~~d~g~y~C 187 (212)
...|....+.+|+++.|.|.+.+. +.+.+.|++. +...+ .....++... .......|.|.+++.+|+|.|.|
T Consensus 4 ~Q~p~~v~v~~G~svtL~C~~s~~~~~~~~v~Wyrq~~g~~~~~li~~~~R~~~~~~~~~~~~sL~I~~v~~~DsG~Y~C 83 (126)
T 3moq_A 4 DQTPRTATKETGESLTINCVLRDASFELKDTGWYRTKLGSTNEQSISIGGRYVETVNKGSKSFSLRISDLRVEDSGTYKC 83 (126)
T ss_dssp EEECSEEEEETTCCEEEEEEEESCSSCCCEEEEEEEETTCCCCEECCCBTTEEEEEETTTTEEEEEECSCCGGGCEEEEE
T ss_pred EECCceEEEeCCCCEEEEEEeecCccCCceEEEEEeCCCCCceEEEEeCCcEEEEEeCCCCEEEEEECcCChHhCEEEEE
Confidence 345566778999999999999765 4568999983 22111 1123455432 22235789999999999999999
Q ss_pred EEEccccc
Q psy2441 188 VAENEVGT 195 (212)
Q Consensus 188 ~a~n~~g~ 195 (212)
.+.+..+.
T Consensus 84 ~~~~~~~~ 91 (126)
T 3moq_A 84 QAFYVFFA 91 (126)
T ss_dssp EEEEEEET
T ss_pred EEEEcCCC
Confidence 99887653
No 450
>1p6f_A NKP46, natural cytotoxicity triggering receptor 1; natural cytotoxicity receptor, NK cell receptor, immunoglobulin fold, immune system; 2.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.01 E-value=1.5e-09 Score=76.61 Aligned_cols=90 Identities=17% Similarity=0.094 Sum_probs=63.2
Q ss_pred CccccCCcceeEecCCcEEEEEeeeeCCCCceEEEeCCEEecCCCCCceEEcCCCCceeEEEcCCCCCCCeeEEEEEEcc
Q psy2441 113 PQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREMLPVDTSRNPRYNLLTSGAPGALQITNSIEEDQGKYECVAENE 192 (212)
Q Consensus 113 p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~n~ 192 (212)
|.+...+.. .+.+|+.+.|.|.+.+ +.+.+.|+|++..+... .... ........|.|.+++.+|+|.|.|.+.|.
T Consensus 8 P~i~~~P~~-~v~~G~~VtL~C~~~~-~~~~~~w~k~g~~~~~~-~~~~--~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~ 82 (242)
T 1p6f_A 8 PFIWAEPHF-MVPKEKQVTICCQGNY-GAVEYQLHFEGSLFAVD-RPKP--PERINKVKFYIPDMNSRMAGQYSCIYRVG 82 (242)
T ss_dssp CEEEEESCS-EEETTCCEEEEEECCT-TCCEEEEEETTEEEEEE-CCSS--CTTCCEEEEEECSCCGGGCEEEEEEEEET
T ss_pred CEEEeeCCC-ccCCCCcEEEEEeeCC-CCcEEEEEECCCccccc-cccc--cCCcceeEEEecCCCcccCeEEEEEEecC
Confidence 666666665 7889999999999865 34689999999876421 0010 01111378999999999999999999886
Q ss_pred ccc-ceecceEEEEec
Q psy2441 193 VGT-EYSPSTMLYVKG 207 (212)
Q Consensus 193 ~g~-~~~~~~~l~v~~ 207 (212)
.+. ..+..+.|.|.+
T Consensus 83 ~~~s~~S~~~~L~V~~ 98 (242)
T 1p6f_A 83 ELWSEPSNLLDLVVTE 98 (242)
T ss_dssp TEECCCCCCEEEEEEC
T ss_pred CccccCCcceEEEeec
Confidence 442 223337777764
No 451
>2e6q_A Obscurin-like protein 1; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.01 E-value=2.6e-09 Score=65.81 Aligned_cols=74 Identities=9% Similarity=0.074 Sum_probs=55.7
Q ss_pred CCCCeEEeCCCccEEeeCCeEEEEcccCCCCCCcEEEEeCCEEecCCCC-C-------eeEEeecCCCCeEEEeeeCCcc
Q psy2441 27 PGFPQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREMLPVDTSRN-P-------RYNLLTSGAPGTYIKIKPNLFS 98 (212)
Q Consensus 27 ~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~k~g~~l~~~~~-~-------~~~~~~~~~~g~~l~i~~~~~~ 98 (212)
..+|.|...+.+..+.+|+++.|.|.+.+ .+.+.|||||.+|..... . ++.+... +....|.|.++...
T Consensus 6 ~p~~~~~~~l~d~~v~eG~~a~f~C~vs~--~p~v~W~knG~~l~~~~~~~~~~~~~~r~~i~~~-g~~~~L~I~~v~~~ 82 (112)
T 2e6q_A 6 SGTARLVAGLEDVQVYDGEDAVFSLDLST--IIQGTWFLNGEELKSNEPEGQVEPGALRYRIEQK-GLQHRLILHAVKHQ 82 (112)
T ss_dssp CSCCCEEECCCCEEEETTCEEEEEEEESS--CCCCEEEESSCBCCSSCCCTTSCTTSCEEEECCB-TTEEEEEEESCCST
T ss_pred cCCcEEecCCCCeEEcCCCcEEEEEEECC--CCeEEEEECCEECccCcccccccccccEEEEEeC-CcEEEEEECCCCHH
Confidence 35678889999999999999999999987 678999999999987620 1 7776543 33345777776555
Q ss_pred ceeEE
Q psy2441 99 PLSVY 103 (212)
Q Consensus 99 ~~~v~ 103 (212)
+...|
T Consensus 83 D~G~Y 87 (112)
T 2e6q_A 83 DSGAL 87 (112)
T ss_dssp TCSEE
T ss_pred HCccE
Confidence 55554
No 452
>2cr6_A KIAA1556 protein, obscurin; IG-fold, immunoglobulin domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.01 E-value=6.6e-10 Score=69.10 Aligned_cols=51 Identities=14% Similarity=0.234 Sum_probs=43.0
Q ss_pred cccCC-CCCeEEeCCCccEEeeCCeEEEEcccCCCCCCcEEEEeCCEEecCC
Q psy2441 23 DKIPP-GFPQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREMLPVDTS 73 (212)
Q Consensus 23 ~~~~~-~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~k~g~~l~~~ 73 (212)
.+.+. .++.|...+.+..+.+|+.+.|.|.+.+.|.+.+.|||+|..+...
T Consensus 6 ~l~V~~~p~~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~g~~l~~~ 57 (115)
T 2cr6_A 6 SGLVQGRRVHIIEDLEDVDVQEGSSATFRCRISPANYEPVHWFLDKTPLHAN 57 (115)
T ss_dssp CCCCCSSCCEEEECCCEEEEETTSCEECCCEEESTTCCSCEEEESSCEECCS
T ss_pred EEEEcCCCCeEeccCccEEEeCCCcEEEEEEEcCCCCCccEEEECCEECCCC
Confidence 34443 4457888889999999999999999999999999999999888764
No 453
>1ncn_A T lymphocyte activation antigen CD86; IG V, beta strands, immune system; 2.70A {Homo sapiens} SCOP: b.1.1.1 PDB: 1i85_A
Probab=99.01 E-value=6.3e-09 Score=64.05 Aligned_cols=74 Identities=16% Similarity=0.222 Sum_probs=52.6
Q ss_pred eeEecCCcEEEEEeeeeCCCC-----ceEEEeCCEE-e---cC----------CCCCceEEcCCCCceeEEEcCCCCCCC
Q psy2441 122 KVVEISHTTVLHCSASGNPPP-----KISWIREMLP-V---DT----------SRNPRYNLLTSGAPGALQITNSIEEDQ 182 (212)
Q Consensus 122 ~~~~~g~~~~l~C~~~~~p~~-----~i~W~~~~~~-~---~~----------~~~~~~~~~~~~~~~~l~i~~~~~~d~ 182 (212)
..+..|+++.|.|.+.+.|.+ .+.|++++.. + .. ....++....+. .+|.|.+++.+|+
T Consensus 4 v~~~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~--~sL~I~~v~~~D~ 81 (110)
T 1ncn_A 4 IQAYFNETADLPCQFANSQNQSLSELVVFWQDQENLVLNEVYLGKEKFDSVHSKYMGRTSFDSDS--WTLRLHNLQIKDK 81 (110)
T ss_dssp EEEETTSCEEEECCCCCTTCCCGGGEEEEEEETTCCEEEEEETTEECCSSBCTTTTTSEEEETTT--TEEEECSCCGGGC
T ss_pred EEEEeCCCEEEEeEeCCCCcCCCccEEEEEEeCCCccEEEEECCcccccccCcccCCcEEEECCC--EEEEEcCCChHHC
Confidence 457789999999999765543 3999997531 1 00 012344443332 7999999999999
Q ss_pred eeEEEEEEcccccce
Q psy2441 183 GKYECVAENEVGTEY 197 (212)
Q Consensus 183 g~y~C~a~n~~g~~~ 197 (212)
|.|.|.+.+..+...
T Consensus 82 G~Y~C~v~~~~~~~~ 96 (110)
T 1ncn_A 82 GLYQCIIHHKKPTGM 96 (110)
T ss_dssp EEEEEEEEEECSSSE
T ss_pred EEEEEEEEcCCCCce
Confidence 999999998876654
No 454
>3bqu_C 3H6 FAB light chain; beta sheet, immune system; 3.00A {Mus musculus}
Probab=99.00 E-value=1e-10 Score=81.80 Aligned_cols=94 Identities=19% Similarity=0.393 Sum_probs=48.7
Q ss_pred ccccCCcceeEecCCcEEEEEeeeeCCCCceEEEeCCE--Eec----------CCCCCceEEcCCCCceeEEEcCCCCCC
Q psy2441 114 QITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREML--PVD----------TSRNPRYNLLTSGAPGALQITNSIEED 181 (212)
Q Consensus 114 ~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~--~~~----------~~~~~~~~~~~~~~~~~l~i~~~~~~d 181 (212)
.+...+....+.+|+++.|.|.+.+.|.+.+.|++++. ... .....++....++...+|.|.+++.+|
T Consensus 25 ~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D 104 (233)
T 3bqu_C 25 TVTQSPASLSMSIGEKVTIRCITSTDIDDDMNWYQQKPGEPPRLLISDGNTLRPGVPSRFSSSGYGTDFVFTIENMLSED 104 (233)
T ss_dssp CEEEECSBC-------CCEEEEEEEEESSCEEEEEECTTSCCEEEECTTSCBCTTSCTTCCCCEEEEEEEEC-----CCC
T ss_pred eEEEcCCeEEEecCCCEEEEEecCCcCCCeEEEEEECCCCCcEEEEEcCCccCCCCCccEEeeccCCEEEEEECCCCHHH
Confidence 33444566678899999999999988888999998531 110 001123322222122489999999999
Q ss_pred CeeEEEEEEcccccceecceEEEEec
Q psy2441 182 QGKYECVAENEVGTEYSPSTMLYVKG 207 (212)
Q Consensus 182 ~g~y~C~a~n~~g~~~~~~~~l~v~~ 207 (212)
+|.|.|.+.|..+........+.|..
T Consensus 105 ~G~Y~C~~~~~~~~~~~~~~~l~V~~ 130 (233)
T 3bqu_C 105 VADYYCLQSDNLPYTFGGGTNLEIKR 130 (233)
T ss_dssp CSEEEEEECSSSSCCBCCCCBC---C
T ss_pred CEEEEEEEecCCceeecCCEEEEEeC
Confidence 99999999987654332223445543
No 455
>2ny1_B T-cell surface glycoprotein CD4; HIV, GP120, CD4, viral protein-immune system compl; HET: NAG SUC; 1.99A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 2nxz_B* 2ny0_B* 2nxy_B* 2ny2_B* 2ny3_B* 2ny4_B* 2ny5_C* 2ny6_B* 3jwd_C* 3jwo_C* 1g9m_C* 1g9n_C* 1gc1_C* 1rzj_C* 1rzk_C* 3o2d_A 3cd4_A 3lqa_C* 2b4c_C* 2qad_B* ...
Probab=99.00 E-value=1.4e-09 Score=73.26 Aligned_cols=73 Identities=22% Similarity=0.246 Sum_probs=54.1
Q ss_pred eeEecCCcEEEEEeeeeCCCCceEEEeCCEE--ecC----------CCCCceEEcC---CCCceeEEEcCCCCCCCeeEE
Q psy2441 122 KVVEISHTTVLHCSASGNPPPKISWIREMLP--VDT----------SRNPRYNLLT---SGAPGALQITNSIEEDQGKYE 186 (212)
Q Consensus 122 ~~~~~g~~~~l~C~~~~~p~~~i~W~~~~~~--~~~----------~~~~~~~~~~---~~~~~~l~i~~~~~~d~g~y~ 186 (212)
..+.+|+.+.|.|.+.+.|.+.+.|++++.. +.. ....++.... ..+...|.|.+++.+|+|.|.
T Consensus 5 v~~~~G~~v~L~C~~~~~~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~ 84 (184)
T 2ny1_B 5 VLGKKGDTVELTCTASQKKSIQFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRSLWDQGNFPLIIKNLKIEDSDTYI 84 (184)
T ss_dssp EEEETTSCEEECCBCSSSSCCCEEEEETTCCEEEEEETTEEEECSCTTGGGEECCGGGGGGTBCCEEECSCCGGGCEEEE
T ss_pred EEEeCCCCEEEEEEEcCCCceEEEEEeCCccceEEecCceEecCChhhCCccccccccccCCeEEEEEecCCHHHCEEEE
Confidence 4578899999999999999999999998752 210 0112333322 112356999999999999999
Q ss_pred EEEEcccc
Q psy2441 187 CVAENEVG 194 (212)
Q Consensus 187 C~a~n~~g 194 (212)
|.+.|..|
T Consensus 85 C~~~~~~~ 92 (184)
T 2ny1_B 85 CEVEDQKE 92 (184)
T ss_dssp EEETTEEE
T ss_pred EEEEcCCC
Confidence 99998765
No 456
>2coq_A NEW antigen receptor variable domain; IG VNAR, natural TYPE2, immune system; 2.10A {Orectolobus maculatus}
Probab=99.00 E-value=1.8e-09 Score=66.31 Aligned_cols=76 Identities=21% Similarity=0.366 Sum_probs=53.5
Q ss_pred cCCcceeEecCCcEEEEEeeeeCC--CCceEEEeCC--EEe--cCCCCCceEEc--CCCCceeEEEcCCCCCCCeeEEEE
Q psy2441 117 EAPSTKVVEISHTTVLHCSASGNP--PPKISWIREM--LPV--DTSRNPRYNLL--TSGAPGALQITNSIEEDQGKYECV 188 (212)
Q Consensus 117 ~~~~~~~~~~g~~~~l~C~~~~~p--~~~i~W~~~~--~~~--~~~~~~~~~~~--~~~~~~~l~i~~~~~~d~g~y~C~ 188 (212)
..+....+.+|+++.|.|.+.+.. .+.+.|+++. ... ......++... .......|.|.++..+|+|.|.|.
T Consensus 5 q~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~~~~~DsG~Y~C~ 84 (108)
T 2coq_A 5 QTPRIATKETGESLTINCVLRDTACALDSTNWYRTKLGSTKEQTISIGGRYSETVDEGSNSASLTIRDLRVEDSGTYKCK 84 (108)
T ss_dssp EECSEEEECTTCCEEEEEEECCSSEEEEEEEEEEEETTCCCEEECCCBTTEEEEEETTTTEEEEEECSCCGGGCEEEEEE
T ss_pred eCCceEEEcCCCCEEEEeEeCCCcCCCCEEEEEEcCCCCCcEEEEEeCCceEEEEcCCCCEEEEEECCCCcccCEEEEEE
Confidence 345567788999999999997753 5689999853 211 11113455432 222347899999999999999999
Q ss_pred EEcc
Q psy2441 189 AENE 192 (212)
Q Consensus 189 a~n~ 192 (212)
+.|.
T Consensus 85 ~~~~ 88 (108)
T 2coq_A 85 AYRR 88 (108)
T ss_dssp EEEE
T ss_pred EEeC
Confidence 9883
No 457
>2gjj_A A21 single-chain antibody fragment against ERBB2; IG family, SCFV, immune system; 2.10A {Mus musculus} PDB: 3h3b_C
Probab=98.99 E-value=2e-09 Score=76.85 Aligned_cols=96 Identities=20% Similarity=0.279 Sum_probs=66.2
Q ss_pred CccccCCcceeEecCCcEEEEEeeeeCC------CCceEEEeCC--EEec----------CCCCCceEEcCCCCceeEEE
Q psy2441 113 PQITEAPSTKVVEISHTTVLHCSASGNP------PPKISWIREM--LPVD----------TSRNPRYNLLTSGAPGALQI 174 (212)
Q Consensus 113 p~~~~~~~~~~~~~g~~~~l~C~~~~~p------~~~i~W~~~~--~~~~----------~~~~~~~~~~~~~~~~~l~i 174 (212)
+.+...+....+.+|+.+.|.|.+.+.+ .+.+.|+++. .... .....++....+.....|.|
T Consensus 6 ~~v~q~p~~v~v~~G~~v~L~C~~~~~~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~L~I 85 (264)
T 2gjj_A 6 IVLTQTPSSLPVSVGEKVTMTCKSSQTLLYSNNQKNYLAWYQQKPGQSPKLLISWAFTRKSGVPDRFTGSGSGTDFTLTI 85 (264)
T ss_dssp CCEEEECSEEEEETTCCEEEEEEESSCCEETTTTEECEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEE
T ss_pred cceEecCCeEEecCCCcEEEEeEcCCcccccccCCceEEEEEECCCCCcEEEEEecccCCCCCCccEEEecCCCEEEEEE
Confidence 4455556677889999999999998887 6799999842 2111 00124555443333468999
Q ss_pred cCCCCCCCeeEEEEEEcccccceecceEEEEecc
Q psy2441 175 TNSIEEDQGKYECVAENEVGTEYSPSTMLYVKGT 208 (212)
Q Consensus 175 ~~~~~~d~g~y~C~a~n~~g~~~~~~~~l~v~~~ 208 (212)
.++..+|+|.|.|.+.|..+........|.|...
T Consensus 86 ~~v~~~DsG~Y~C~~~~~~~~~~~~~~~L~V~~~ 119 (264)
T 2gjj_A 86 GSVKAEDLAVYYCQQYSNYPWTFGGGTRLEIKRG 119 (264)
T ss_dssp SSCCGGGCEEEEEEECSSSSCEECCCEEEEEECC
T ss_pred CCCCHHHCEEEEEEEecCCccEecCCEEEEEEcC
Confidence 9999999999999999875532222256666654
No 458
>2kdg_A Myotilin; immonoglobulin domain, actin-binding, structural protein, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=98.98 E-value=1.1e-09 Score=66.20 Aligned_cols=46 Identities=22% Similarity=0.450 Sum_probs=41.2
Q ss_pred CCCeEEeCCCccEEeeCCeEEEEcccCCCCCCcEEEEeCCEEecCC
Q psy2441 28 GFPQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREMLPVDTS 73 (212)
Q Consensus 28 ~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~k~g~~l~~~ 73 (212)
.+|.+...+....+.+|+.+.|.|.+.+.|.+.+.|+|+|..+...
T Consensus 4 ~~P~~~~~p~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~g~~~~~~ 49 (100)
T 2kdg_A 4 GPPRFIQVPENMSIDEGRFCRMDFKVSGLPAPDVSWYLNGRTVQSD 49 (100)
T ss_dssp EEEECCCCCCCEEEETTCCEEEEEECEEESCCEEEEEETTEEECCC
T ss_pred CCCeEEeCCCCEEecCCCEEEEEEEEEeeCCCEEEEEECCEECcCC
Confidence 4677777888899999999999999999999999999999988765
No 459
>1nqb_A Single-chain antibody fragment; multivalent antibody, diabody, domain SWA immunoglobulin; 2.00A {Mus musculus} SCOP: b.1.1.1 b.1.1.1 PDB: 1lmk_A 1qnz_H
Probab=98.98 E-value=3.1e-09 Score=75.55 Aligned_cols=67 Identities=10% Similarity=0.161 Sum_probs=50.1
Q ss_pred ceeeEEEeeccCCC--c--ceecccccCCCCCeEEeCCCccEEeeCCeEEEEcccCCCCCC-----cEEEEe--CCEE
Q psy2441 3 IGTYIKIKPNLFSP--L--SVYSADKIPPGFPQITEAPSTKVVEISHTTVLHCSASGNPPP-----KISWIR--EMLP 69 (212)
Q Consensus 3 ~g~Y~C~~~~~~~~--~--~~~~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~-----~v~W~k--~g~~ 69 (212)
+|.|+|.+.|..+. . ......+.+..+|.+...|....+.+|++++|.|.+.+.|.+ .+.||| +|..
T Consensus 91 sG~Y~C~~~n~~g~~~~~~~~~~~~L~V~~~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~g~~ 168 (256)
T 1nqb_A 91 SAVYYCARYDYYGSSYFDYWGQGTTVTVSSDIELTQTPLSLPVSLGDQASISCRSSQSIVHSNGNTYLEWYLQKPGQS 168 (256)
T ss_dssp CEEEEEEECCTTSSSSCSEECCCEEEEECCCCCEEEECSEEEECTTCCEEEEEEESSCCBCTTSCBCEEEEEECTTSC
T ss_pred CEEEEEEEeeccCccceeEEcCceeeeecccccEEecCcEEEEecCCcEEEEeEecCcccccccceEEEEEEECCCCC
Confidence 58999999997552 1 111233444566777777888889999999999999888765 899999 5543
No 460
>2kkq_A Myotilin; unknown function, actin-binding, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=98.98 E-value=2.9e-09 Score=66.30 Aligned_cols=77 Identities=25% Similarity=0.320 Sum_probs=54.3
Q ss_pred CCCCeEEeCCCccEEeeCCeEEEEcccCCCCCCcEEEEeCCEEecCCCCCeeEEeecCCCCeEEEeeeCCccceeEEe
Q psy2441 27 PGFPQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREMLPVDTSRNPRYNLLTSGAPGTYIKIKPNLFSPLSVYS 104 (212)
Q Consensus 27 ~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~k~g~~l~~~~~~~~~~~~~~~~g~~l~i~~~~~~~~~v~~ 104 (212)
..+|.|...|.+..+.+|+.+.|.|.+.+.|.+.+.|+|++..+... ..++.+....+....|.|.++...+...|.
T Consensus 13 ~~~p~f~~~p~~~~v~~G~~v~L~C~~~g~p~p~v~W~k~~~~~~~~-~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~ 89 (116)
T 2kkq_A 13 KRAPMFIYKPQSKKVLEGDSVKLECQISAIPPPKLFWKRNNEMVQFN-TDRISLYQDNTGRVTLLIKDVNKKDAGWYT 89 (116)
T ss_dssp CBCCCBSSCCCCEEEETTEEEEEEEEBCCBSCCEEEEEETTEECCCC-BTTEEEEECTTCEEEEEEEEECGGGCEEEE
T ss_pred CCCCeEEeCCCcEEEeCCCcEEEEEEEeccCCCEEEEEECCEECcCC-CCeEEEEeCCCCeEEEEECCCCcccCEEEE
Confidence 57889989999999999999999999999999999999999888643 244544433111123444444444433333
No 461
>1oaq_L Light chain; antibody, allergy, IGE, conformational diversity, multispecificity; 1.50A {Rattus rattus} SCOP: b.1.1.1 PDB: 1ocw_L 2bjm_L* 1oau_L* 1oar_L* 1oaz_L 1mfa_L* 1a6v_L* 1oax_L* 1oay_L* 1a6w_L* 1a6u_L 1dl7_L*
Probab=98.98 E-value=2.9e-09 Score=66.72 Aligned_cols=87 Identities=23% Similarity=0.273 Sum_probs=58.6
Q ss_pred eeEecCCcEEEEEeeeeCC---CCceEEEeCC--E-E--ec-------CCCCCceEEcCCCCceeEEEcCCCCCCCeeEE
Q psy2441 122 KVVEISHTTVLHCSASGNP---PPKISWIREM--L-P--VD-------TSRNPRYNLLTSGAPGALQITNSIEEDQGKYE 186 (212)
Q Consensus 122 ~~~~~g~~~~l~C~~~~~p---~~~i~W~~~~--~-~--~~-------~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~ 186 (212)
..+.+|+++.|.|...+.+ ...+.|++.. . + +- .....|+..........|.|.++..+|+|.|.
T Consensus 10 ~~~~~G~~v~L~C~~~~~~~~~~~~v~Wyrq~~~~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~L~I~~~~~~DsG~Y~ 89 (120)
T 1oaq_L 10 LTTSPGETVTLTCRSSTGAVTTSNYANWVQEKPDHLFTGLIGGTNNRAPGVPARFSGSLIGNKAALTITGAQTEDEAIYF 89 (120)
T ss_dssp EEECTTCEEEEEEEETTBCCCGGGCCEEEEEETTTEEEEEEETTTEECTTSCTTEEEEEETTEEEEEEESCCGGGCEEEE
T ss_pred EEEcCCCCEEEEEEeCCCccCCCCEEEEEEeCCCCCCeEEEEEcCccCCCCCCceEEecCCCeEEEEECCCChhhCeEEE
Confidence 6788999999999997665 4689999842 1 1 10 00134555443333468999999999999999
Q ss_pred EEEEcccccceecceEEEEecc
Q psy2441 187 CVAENEVGTEYSPSTMLYVKGT 208 (212)
Q Consensus 187 C~a~n~~g~~~~~~~~l~v~~~ 208 (212)
|.+.+...........|.|...
T Consensus 90 C~~~~~~~~~fg~gt~L~V~~~ 111 (120)
T 1oaq_L 90 CALWYSNHLVFGGGTKLTVLGQ 111 (120)
T ss_dssp EEEEETTEEEECCCEEEEECC-
T ss_pred EEEccCCCcEECCCEEEEEcCC
Confidence 9998764322223357777654
No 462
>1zxq_A ICAM-2, intercellular adhesion molecule-2; immunoglobulin fold, cell adhesion, glycoprotein, transmembr; HET: NAG; 2.20A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4
Probab=98.98 E-value=2.2e-08 Score=67.30 Aligned_cols=155 Identities=15% Similarity=0.197 Sum_probs=91.4
Q ss_pred eEEeCCCccEEeeCCeEEEEcccCCCCCCc-EEEEe--CCEEecCCCC-CeeEEeecCCCCeEEEeeeC------Cccce
Q psy2441 31 QITEAPSTKVVEISHTTVLHCSASGNPPPK-ISWIR--EMLPVDTSRN-PRYNLLTSGAPGTYIKIKPN------LFSPL 100 (212)
Q Consensus 31 ~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~-v~W~k--~g~~l~~~~~-~~~~~~~~~~~g~~l~i~~~------~~~~~ 100 (212)
.+.+.|....|..|+++.|.|.+.. +.+. +.|-- ++..+....+ ..+.+....++|.|+|...- ..+.+
T Consensus 4 ~v~v~P~~~~V~~G~S~~l~Cs~~c-~~p~~~glet~l~~~~~~~g~~w~~l~l~~vs~~g~~~C~~~c~~~~~~~~~~i 82 (192)
T 1zxq_A 4 EVHVRPKKLAVEPKGSLEVNCSTTC-NQPEVGGLETSLNKILLDEQAQWKHYLVSNISHDTVLQCHFTCSGKQESMNSNV 82 (192)
T ss_dssp CEEEESSEEEECTTEEEEEEEEESC-SSCSEEEEECSSEEEEEEEETTEEEEEEEEECSCEEEEEEEEETTEEEEEEEEE
T ss_pred EEEEeCCCcEEeCCCcEEEEEECCC-CCccccccccccCceEEcCCCCeEEEEEeccccCCeeEEEEECCCcceEEEEEE
Confidence 4556777888999999999999975 3443 45542 1222222111 34566555467889997765 34455
Q ss_pred eEEeecCCCCCCCccccCCcceeEecCCcEEEEEeeee-CCCCc--eEEEeCCEEecCCCCCceEEcCCCCceeEEEcCC
Q psy2441 101 SVYSADKIPPGFPQITEAPSTKVVEISHTTVLHCSASG-NPPPK--ISWIREMLPVDTSRNPRYNLLTSGAPGALQITNS 177 (212)
Q Consensus 101 ~v~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~-~p~~~--i~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~ 177 (212)
+||.. |..+.+.. ....+.+|+.++|.|.+.+ .|... +.|++++..+.................++.+ .+
T Consensus 83 tVy~~----P~~v~i~~--~p~~~~~G~~~tL~C~v~~v~P~~~L~v~llrG~~~l~~~~f~~~~~~~~~~tv~~~~-~~ 155 (192)
T 1zxq_A 83 SVYQP----PRQVILTL--QPTLVAVGKSFTIECRVPTVEPLDSLTLFLFRGNETLHYETFGKAAPAPQEATATFNS-TA 155 (192)
T ss_dssp EECBC----CCCCEEEE--ESSEECTTSEEEEEEEECSCBCGGGEEEEEEETTEEEEEEECCSSTTCTTCEEEEEEE-EC
T ss_pred EEEeC----CCCceEcc--CCccccCCCcEEEEEEeCCeECCCCcEEEEEcCCEEeeecccccccCcCcceEEEEEE-ec
Confidence 55542 22233322 2234678999999999975 66654 7999999887542100000011111122223 35
Q ss_pred CCCCCe-eEEEEEEccc
Q psy2441 178 IEEDQG-KYECVAENEV 193 (212)
Q Consensus 178 ~~~d~g-~y~C~a~n~~ 193 (212)
.++|.| .|.|.|.-..
T Consensus 156 ~r~D~g~~~sC~A~L~L 172 (192)
T 1zxq_A 156 DREDGHRNFSCLAVLDL 172 (192)
T ss_dssp CGGGGGCEEEEEEEEEC
T ss_pred chhhCCceEEEEEEecC
Confidence 666666 9999998765
No 463
>3pv7_A B7-H6, IG-like domain-containing protein DKFZP686O24166/DKFZP686I21167; NK cell receptor, receptor-ligand complex, immune system; HET: NAG; 2.00A {Homo sapiens} PDB: 3pv6_A*
Probab=98.98 E-value=1.5e-09 Score=76.56 Aligned_cols=90 Identities=17% Similarity=0.282 Sum_probs=61.6
Q ss_pred CCcceeEecCCcEEEEEeeeeCCCCc-----eEEEeCCEEecC---------------CCCCceEEc-CCCCceeEEEcC
Q psy2441 118 APSTKVVEISHTTVLHCSASGNPPPK-----ISWIREMLPVDT---------------SRNPRYNLL-TSGAPGALQITN 176 (212)
Q Consensus 118 ~~~~~~~~~g~~~~l~C~~~~~p~~~-----i~W~~~~~~~~~---------------~~~~~~~~~-~~~~~~~l~i~~ 176 (212)
.+....+..|+.+.|.|.+.+.|.+. +.|++++..... ....++... ......+|.|.+
T Consensus 9 ~p~~~~v~~G~~v~L~C~~~g~p~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sL~I~~ 88 (248)
T 3pv7_A 9 AGGTQITPLNDNVTIFCNIFYSQPLNITSMGITWFWKSLTFDKEVKVFEFFGDHQEAFRPGAIVSPWRLKSGDASLRLPG 88 (248)
T ss_dssp TTSEEEEETTSCEEECCEEEESSCCCTTSCEEEEEEECSSCCCEEEEEEEESSCEEESSTTCBCCHHHHTTTBCCEEESS
T ss_pred CCCCeEEeCCCCEEEeeEEecCCCcCCCceEEEEEEEcCCCCcceEEEEecCCcccccCCceEEEeccCCCCcEEEEeCC
Confidence 34456788999999999999988776 999986422110 000011000 011135699999
Q ss_pred CCCCCCeeEEEEEEcccccceecceEEEEecc
Q psy2441 177 SIEEDQGKYECVAENEVGTEYSPSTMLYVKGT 208 (212)
Q Consensus 177 ~~~~d~g~y~C~a~n~~g~~~~~~~~l~v~~~ 208 (212)
++.+|+|.|.|.+.|..+..... +.|.|.++
T Consensus 89 v~~~D~G~Y~C~~~~~~~~~~~~-~~L~V~~~ 119 (248)
T 3pv7_A 89 IQLEEAGEYRCEVVVTPLKAQGT-VQLEVVAS 119 (248)
T ss_dssp CCGGGCEEEEEEEEETTEEEEEE-EEEEEEBC
T ss_pred CCHHHCeEEEEEEEeCCccceeE-EEEEEecC
Confidence 99999999999999988776655 77777663
No 464
>1wit_A Twitchin 18TH IGSF module; immunoglobulin superfamily, I SET, muscle protein; NMR {Caenorhabditis elegans} SCOP: b.1.1.4 PDB: 1wiu_A
Probab=98.98 E-value=6.8e-10 Score=66.26 Aligned_cols=46 Identities=20% Similarity=0.275 Sum_probs=40.3
Q ss_pred CCCeEEeCCCccEEeeCCeEEEEcccCCCCCCcEEEEeCC--EEecCC
Q psy2441 28 GFPQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREM--LPVDTS 73 (212)
Q Consensus 28 ~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~k~g--~~l~~~ 73 (212)
.+|.|...+....+.+|+.+.|.|.+.|.|.|.+.|+|+| ..+...
T Consensus 1 ~~P~i~~~~~~~~v~~G~~~~l~C~~~g~P~p~i~W~k~~~~~~~~~~ 48 (93)
T 1wit_A 1 LKPKILTASRKIKIKAGFTHNLEVDFIGAPDPTATWTVGDSGAALAPE 48 (93)
T ss_dssp CCCEECCCCCEEEECTTBCCEEEEEEECCSSCEEEEECSTTTCBCSTT
T ss_pred CCCeEEcCCCceEEeCCCEEEEEEEEEEcCCCEEEEEECCCCcccCCc
Confidence 3688877778889999999999999999999999999999 877553
No 465
>1fhg_A Telokin; immunoglobulin fold, beta barrel, contractIle protein; 2.00A {Meleagris gallopavo} SCOP: b.1.1.4 PDB: 1tlk_A
Probab=98.97 E-value=2.4e-09 Score=70.12 Aligned_cols=56 Identities=21% Similarity=0.417 Sum_probs=47.5
Q ss_pred ccCCCCCeEEeCCCccEEeeCCeEEEEcccCCCCCCcEEEEeCCEEecCCCCCeeEEe
Q psy2441 24 KIPPGFPQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREMLPVDTSRNPRYNLL 81 (212)
Q Consensus 24 ~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~k~g~~l~~~~~~~~~~~ 81 (212)
+.+..+|.|...+....+.+|+.+.|.|.+.+.|.+.+.|||++..+... .++.+.
T Consensus 36 ~~v~~~P~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~v~W~k~g~~~~~~--~~~~~~ 91 (154)
T 1fhg_A 36 EKPHVKPYFTKTILDMEVVEGSAARFDCKVEGYPDPEVMWFKDDNPVKES--RHFQID 91 (154)
T ss_dssp CCCCEEEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCS--SSEEEE
T ss_pred ccCCCCCeEEccCCcEEEeCCCeEEEEEEEEEecCCEEEEEECCEECCCC--CcEEEE
Confidence 33467899999999999999999999999999999999999999998765 555544
No 466
>2jju_A Signal regulatory protein beta-1; immunoglobulin domain, immunoglobulin superfamily, immune system, transmembrane, paired receptor; 1.19A {Homo sapiens} PDB: 2jjv_A 2uv3_A* 2jjt_A* 2jjs_A* 2jjw_A
Probab=98.97 E-value=1.1e-08 Score=64.75 Aligned_cols=76 Identities=21% Similarity=0.383 Sum_probs=53.1
Q ss_pred cCCcceeEecCCcEEEEEeeeeC-CCCceEEEeCCEE----ecCC---CCCceEEcC-----CCCceeEEEcCCCCCCCe
Q psy2441 117 EAPSTKVVEISHTTVLHCSASGN-PPPKISWIREMLP----VDTS---RNPRYNLLT-----SGAPGALQITNSIEEDQG 183 (212)
Q Consensus 117 ~~~~~~~~~~g~~~~l~C~~~~~-p~~~i~W~~~~~~----~~~~---~~~~~~~~~-----~~~~~~l~i~~~~~~d~g 183 (212)
..+....+.+|+++.|.|.+.+. +.+.+.|++++.. +... ...++.... ......|.|.++..+|+|
T Consensus 8 q~p~~~~v~~G~~vtL~C~~~~~~~~~~v~W~r~~~~~~~li~~~~~~~~~r~~~~~~~~~~~~~~~~L~I~~v~~~DsG 87 (127)
T 2jju_A 8 QPEKSVSVAAGESATLRCAMTSLIPVGPIMWFRGAGAGRELIYNQKEGHFPRVTTVSELTKRNNLDFSISISNITPADAG 87 (127)
T ss_dssp CCCSEEEEETTSCEEECCEESCCCSCCCEEEEECSSTTCEEEEESSSSCCTTEEEC-------CCBCCEEECSCCGGGCE
T ss_pred eeCCeEEEeCCCCEEEEEEEeCCCCCCEEEEEecCCCCcEEEEECCCCccCcEEeeEeeeecCCCEEEEEECCCCHHHCE
Confidence 34556788999999999999765 5678999997521 1111 012343211 122468999999999999
Q ss_pred eEEEEEEcc
Q psy2441 184 KYECVAENE 192 (212)
Q Consensus 184 ~y~C~a~n~ 192 (212)
.|.|.+.|.
T Consensus 88 ~Y~C~~~~~ 96 (127)
T 2jju_A 88 TYYCVKFRK 96 (127)
T ss_dssp EEEEEEEEC
T ss_pred EEEEEEEcC
Confidence 999999875
No 467
>2edo_A CD48 antigen; beta-sandwich, IG-fold, B-lymphocyte activation marker blast-1, BCM1 surface antigen, leukocyte antigen MEM-102, TCT.1; NMR {Homo sapiens}
Probab=98.97 E-value=2.1e-09 Score=67.47 Aligned_cols=86 Identities=20% Similarity=0.192 Sum_probs=59.0
Q ss_pred ceeEecCCcEEEEEee-eeCCCCceEEEeCCE-Eec-----------CCCCCceEEcCCCCceeEEEcCCCCCCCeeEEE
Q psy2441 121 TKVVEISHTTVLHCSA-SGNPPPKISWIREML-PVD-----------TSRNPRYNLLTSGAPGALQITNSIEEDQGKYEC 187 (212)
Q Consensus 121 ~~~~~~g~~~~l~C~~-~~~p~~~i~W~~~~~-~~~-----------~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C 187 (212)
...+.+|+++.|.|.. .......+.|+++.. .+. .....|+.+... ..+|.|.+++.+|+|.|.|
T Consensus 13 pv~~~~G~~VtL~c~~~~~~~~~~i~W~~~~~~~i~~~~~~~~~~~~~~f~~R~~l~~~--~~sL~I~nv~~~DsG~Y~c 90 (121)
T 2edo_A 13 HMTVVSGSNVTLNISESLPENYKQLTWFYTFDQKIVEWDSRKSKYFESKFKGRVRLDPQ--SGALYISKVQKEDNSTYIM 90 (121)
T ss_dssp CCEEETTSCEEECCSSCCCSSEEEEEEEEETTEEEEEECSSCEEECSCTTTTTCEECTT--TCCEEESSCCGGGCSEEEE
T ss_pred EEEEEeCCCEEEeCCCCCCCceeEEEEEcCCCCeEEEEECcCCeEeChhcCCcEEEeCC--CceEEEeCCCHHHCeEEEE
Confidence 3568899999999987 334456899998653 111 111234545422 2789999999999999999
Q ss_pred EEEcccccceecceEEEEecc
Q psy2441 188 VAENEVGTEYSPSTMLYVKGT 208 (212)
Q Consensus 188 ~a~n~~g~~~~~~~~l~v~~~ 208 (212)
.+.+..+......+.|.|.++
T Consensus 91 ~v~~~~~~~~~~~~~L~V~~~ 111 (121)
T 2edo_A 91 RVLKKTGNEQEWKIKLQVLDP 111 (121)
T ss_dssp EEEETTTEEEECCEECEEECC
T ss_pred EEEcCCCcEEEEEEEEEEECC
Confidence 998765543333377777654
No 468
>2d9c_A Signal-regulatory protein beta-1; beta-sandwich, SIRP-beta-1, CD172B antigen, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.97 E-value=1e-08 Score=65.61 Aligned_cols=94 Identities=20% Similarity=0.337 Sum_probs=61.3
Q ss_pred cccCCcceeEecCCcEEEEEeeeeC-CCCceEEEeCCEE----ecCCC---CCceEEcC-----CCCceeEEEcCCCCCC
Q psy2441 115 ITEAPSTKVVEISHTTVLHCSASGN-PPPKISWIREMLP----VDTSR---NPRYNLLT-----SGAPGALQITNSIEED 181 (212)
Q Consensus 115 ~~~~~~~~~~~~g~~~~l~C~~~~~-p~~~i~W~~~~~~----~~~~~---~~~~~~~~-----~~~~~~l~i~~~~~~d 181 (212)
+...+....+.+|+++.|.|.+.+. +.+.+.|++++.. +.... ..++.... +.....|.|.+++.+|
T Consensus 11 v~q~p~~~~v~~G~~v~L~C~~~~~~~~~~v~W~r~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~~~~L~I~~v~~~D 90 (136)
T 2d9c_A 11 VIQPEKSVSVAAGESATLRCAMTSLIPVGPIMWFRGAGAGRELIYNQKEGHFPRVTTVSELTKRNNLDFSISISNITPAD 90 (136)
T ss_dssp EECCCSEEEEETTSCEEECCEESCCCSCCCCEEEETTTSSCEEEEESSSCCCSSBCCSSCSSSSSCCBCCEEESSCCTTT
T ss_pred EEecCcEEEEcCCCCEEEEEEEcCCCCCceEEEEeecCCCeEEEEEcCCCcccceeeeeeeccCCCCEEEEEECCCCHHH
Confidence 3444566788999999999999765 5678999997521 11110 12332211 1124689999999999
Q ss_pred CeeEEEEEEccccc--ce---ecceEEEEecc
Q psy2441 182 QGKYECVAENEVGT--EY---SPSTMLYVKGT 208 (212)
Q Consensus 182 ~g~y~C~a~n~~g~--~~---~~~~~l~v~~~ 208 (212)
+|.|.|.+.+..+. .. .....|.|.+.
T Consensus 91 sG~Y~C~~~~~~~~~~~~~~~g~~t~L~V~~~ 122 (136)
T 2d9c_A 91 AGTYYCVKFRKGSPDDVEFKSGAGTELSVRAK 122 (136)
T ss_dssp CEEEEEEEEECCSSSCEEEEECCCEEEEEECC
T ss_pred CEEEEEEEEeCCCCcccceeeCCCeEEEEEeC
Confidence 99999999875431 11 12267777654
No 469
>3irg_A Titin; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_A 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=98.97 E-value=1.4e-09 Score=65.56 Aligned_cols=75 Identities=17% Similarity=0.317 Sum_probs=53.0
Q ss_pred CCCeEEeCCCccEEeeCCeEEEEcccCCCCCCcEEEEeCCEEecCCCCCeeEEeecCCCCeEEEeeeCCccceeEE
Q psy2441 28 GFPQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREMLPVDTSRNPRYNLLTSGAPGTYIKIKPNLFSPLSVY 103 (212)
Q Consensus 28 ~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~k~g~~l~~~~~~~~~~~~~~~~g~~l~i~~~~~~~~~v~ 103 (212)
.+|.+...+....+.+|+.+.|.|.+.+.|.+.+.|+|++..+......++.+... +....|.|.++...+...|
T Consensus 4 ~pP~i~~~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~-~~~~~L~i~~v~~~D~G~Y 78 (100)
T 3irg_A 4 IPPKIEALPSDISIDEGKVLTVACAFTGEPTPEVTWSCGGRKIHSQEQGRFHIENT-DDLTTLIIMDVQKQDGGLY 78 (100)
T ss_dssp EEEEECCCCSEEEEETTSEEEEEEEEEEESCCEEEEEETTEECCTTGGGTEEEEEC-SSEEEEEESSCCGGGCEEE
T ss_pred CCCeeecCCCcEEEcCCCcEEEEEEEEEcCCCceEEEECCEEeecCCCCEEEEEec-CCEEEEEEeecCcccCEEE
Confidence 35777777888899999999999999999999999999999987543356665543 2223344444443333333
No 470
>2dm2_A Palladin; beta-sandwich, KIAA0992, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.97 E-value=2.2e-09 Score=66.13 Aligned_cols=46 Identities=22% Similarity=0.440 Sum_probs=41.5
Q ss_pred CCCCeEEeCCCccEEeeCCeEEEEcccCCCCCCcEEEEeCCEEecC
Q psy2441 27 PGFPQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREMLPVDT 72 (212)
Q Consensus 27 ~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~k~g~~l~~ 72 (212)
..+|.|...+....+.+|+.+.|.|.+.+.|.+.+.|+|++..+..
T Consensus 6 ~~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~g~~~~~ 51 (110)
T 2dm2_A 6 SGAPFFEMKLKHYKIFEGMPVTFTCRVAGNPKPKIYWFKDGKQISP 51 (110)
T ss_dssp SCCCCBSSCCCCEEEETTCCEEEEEEBCCSSCCEEEEECSSCBCCT
T ss_pred CCCCEEEecCcCeEEeCCCeEEEEEEEEecCCCEEEEEECCEECCC
Confidence 4678888888889999999999999999999999999999988865
No 471
>3nfj_J T cell receptor beta chain; immunoglobulin family, immune system; 2.68A {Homo sapiens} PDB: 3hg1_E
Probab=98.96 E-value=5.7e-09 Score=73.52 Aligned_cols=76 Identities=18% Similarity=0.316 Sum_probs=54.8
Q ss_pred cCCcceeEecCCcEEEEEeeeeCCCCceEEEeCC--EEe------------cCCCCCceEEcCC-CCceeEEEcCCCCCC
Q psy2441 117 EAPSTKVVEISHTTVLHCSASGNPPPKISWIREM--LPV------------DTSRNPRYNLLTS-GAPGALQITNSIEED 181 (212)
Q Consensus 117 ~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~--~~~------------~~~~~~~~~~~~~-~~~~~l~i~~~~~~d 181 (212)
..+....+.+|+.+.|.|.+.+.+.+.+.|++.. ... ......|+.+..+ ....+|.|.+++.+|
T Consensus 6 ~~p~~v~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~I~~v~~~D 85 (245)
T 3nfj_J 6 QWPATLVQPVGSPLSLECTVEGTSNPNLYWYRQAAGRGLQLLFYSVGIGQISSEVPQNLSASRPQDRQFILSSKKLLLSD 85 (245)
T ss_dssp EECSEEEEETTCCEEEEEEEESCSSCEEEEEEESTTSCEEEEEEESSTTCCBCSSCCSSEEEEEETTEEEEEESSCCGGG
T ss_pred CCCceEEecCCCCEEEEEEecCCCCceEEEEEECCCCCcEEEEEECCCcccCCccCCcEEEEecCCCEEEEEECCCChhh
Confidence 3455677889999999999999899999999821 110 0111234443321 224689999999999
Q ss_pred CeeEEEEEEcc
Q psy2441 182 QGKYECVAENE 192 (212)
Q Consensus 182 ~g~y~C~a~n~ 192 (212)
+|.|.|.+.|.
T Consensus 86 ~G~Y~C~~~~~ 96 (245)
T 3nfj_J 86 SGFYLCAWSVS 96 (245)
T ss_dssp CEEEEEEEECC
T ss_pred CEEEEEEEeec
Confidence 99999999983
No 472
>2or7_A T-cell immunoglobulin and mucin domain- containing protein 2; beta barrel, immunoglobulin fold, IGV domain, TIM, immune system; 1.50A {Mus musculus}
Probab=98.96 E-value=2e-09 Score=66.94 Aligned_cols=92 Identities=26% Similarity=0.286 Sum_probs=57.5
Q ss_pred CcceeEecCCcEEEEEeeeeC--CCCceEEEeCCE-------Ee-c-------CCCCCceEEcCC--CCceeEEEcCCCC
Q psy2441 119 PSTKVVEISHTTVLHCSASGN--PPPKISWIREML-------PV-D-------TSRNPRYNLLTS--GAPGALQITNSIE 179 (212)
Q Consensus 119 ~~~~~~~~g~~~~l~C~~~~~--p~~~i~W~~~~~-------~~-~-------~~~~~~~~~~~~--~~~~~l~i~~~~~ 179 (212)
+....+.+|+++.|.|..... ....+.|++... .+ . .....++.+..+ .+..+|.|.+++.
T Consensus 4 p~~v~~~~G~~v~L~C~~~~~~~~~~~v~W~~~~~~~~~~~~~~i~~~~~~~~~~~~~r~~~~~~~~~~~~sL~I~~v~~ 83 (115)
T 2or7_A 4 HTAVQGLAGHPVTLPCIYSTHLGGIVPMCWGLGECRHSYCIRSLIWTNGYTVTHQRNSRYQLKGNISEGNVSLTIENTVV 83 (115)
T ss_dssp --CEEEETTSCEEECCBCCHHHHCSCCEEEEESCHHHHTTTTEEEEECSSSEEEESSTTEECCSCGGGTBCCEEESSCCG
T ss_pred ccEEEEEcCCCEEEEEEeecCCCCCEEEEEECCCCCcCCCceEEEEeCCeEcccccCccEEEecCccCCeEEEEEccCCH
Confidence 445668889999999998643 346899998741 11 0 001344543321 1246899999999
Q ss_pred CCCeeEEEEEEcccccceecceEEEEecceec
Q psy2441 180 EDQGKYECVAENEVGTEYSPSTMLYVKGTQVD 211 (212)
Q Consensus 180 ~d~g~y~C~a~n~~g~~~~~~~~l~v~~~~~p 211 (212)
+|+|.|.|.+.+........ +.|.|.....|
T Consensus 84 ~DsG~Y~C~v~~~~~~~~~~-v~L~V~~~~~p 114 (115)
T 2or7_A 84 GDGGPYCCVVEIPGAFHFVD-YMLEVKPELVP 114 (115)
T ss_dssp GGCEEEEEEECCTTSCEEEE-EEEEEESCC--
T ss_pred HHCEEEEEEEECCCceeEEE-EEEEEcCCCCC
Confidence 99999999998754433333 55555554444
No 473
>3mj6_A Junctional adhesion molecule-like; immunoglobulin tandem domain, cell adhesion, cell junction, glycoprotein, immunoglobulin domain, membrane; HET: NAG FUC; 2.19A {Mus musculus} PDB: 3mj7_A* 3mj9_A*
Probab=98.96 E-value=1.3e-09 Score=77.78 Aligned_cols=84 Identities=18% Similarity=0.341 Sum_probs=56.1
Q ss_pred CccccCCcceeEecCCcEEEEEeee---eCCCCceEEEeCCEEecCC----------------CCCceEEcCC--CCcee
Q psy2441 113 PQITEAPSTKVVEISHTTVLHCSAS---GNPPPKISWIREMLPVDTS----------------RNPRYNLLTS--GAPGA 171 (212)
Q Consensus 113 p~~~~~~~~~~~~~g~~~~l~C~~~---~~p~~~i~W~~~~~~~~~~----------------~~~~~~~~~~--~~~~~ 171 (212)
+.+...+....+.+|+.+.|.|.+. +.+.+.+.|++++...... ...++.+..+ .....
T Consensus 6 ~~v~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~ 85 (268)
T 3mj6_A 6 PGLTVSSPQLRVHVGESVLMGCVVQRTEEKHVDRVDWLFSKDKDDASEYVLFYYSNLSVPTGRFQNRSHLVGDTFHNDGS 85 (268)
T ss_dssp ------CCEEEEETTCCEEECCBCCCSSCCCEEEEEEEEESSSTTCCEEEEEEETTEEEECGGGTTTEEECSCTTTTBCC
T ss_pred cccccCCCceEEecCCcEEEEEEeecCCCCceEEEEEEEeCCCCCceEEEEEEcCCCcccCccccCceEEeecCCCCEEE
Confidence 4555566677889999999999997 6777889999955322110 0133333211 12378
Q ss_pred EEEcCCCCCCCeeEEEEEEcccccc
Q psy2441 172 LQITNSIEEDQGKYECVAENEVGTE 196 (212)
Q Consensus 172 l~i~~~~~~d~g~y~C~a~n~~g~~ 196 (212)
|.|.+++.+|+|.|.|.+.|..+..
T Consensus 86 L~I~~v~~~D~G~Y~C~~~~~~~~~ 110 (268)
T 3mj6_A 86 LLLQDVQKADEGIYTCEIRLKNESM 110 (268)
T ss_dssp EEECSCCGGGCEEEEEEEEETTCCC
T ss_pred EEECCCCHhHCEEEEEEEEecCCcc
Confidence 9999999999999999999876554
No 474
>1neu_A Myelin P0 protein; structural protein, glycoprotein, transmembrane, phosphorylation, immunoglobulin fold, signal; 1.90A {Rattus norvegicus} SCOP: b.1.1.1
Probab=98.96 E-value=5e-09 Score=65.86 Aligned_cols=89 Identities=19% Similarity=0.227 Sum_probs=56.3
Q ss_pred CcceeEecCCcEEEEEeeeeC----CCCceEEEeCCEE------ec------------CCCCCceEEcCC--CCceeEEE
Q psy2441 119 PSTKVVEISHTTVLHCSASGN----PPPKISWIREMLP------VD------------TSRNPRYNLLTS--GAPGALQI 174 (212)
Q Consensus 119 ~~~~~~~~g~~~~l~C~~~~~----p~~~i~W~~~~~~------~~------------~~~~~~~~~~~~--~~~~~l~i 174 (212)
+....+.+|+.+.|.|..... +.+.+.|++++.. +. .....|+.+..+ ....+|.|
T Consensus 6 ~~~v~~~~G~~v~L~C~~~~~~~~~~~~~v~W~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I 85 (124)
T 1neu_A 6 DREVYGAVGSQVTLHCSFWSSEWVSDDISFTWRYQPEGGRDAISIFHYAKGQPYIDEVGTFKERIQWVGDPSWKDGSIVI 85 (124)
T ss_dssp CSEEEEETTSCEEECCEEECSSCCCSCCEEEEEEEETTCCCCEEEEEEETTEEEECSSSTTTTCEEECCBGGGTBCCEEE
T ss_pred CCeEEEEeCCeEEEEeEEeCCCCCCCceEEEEEEcCCCCCceEEEEEecCCeeccccCccccCcEEEecCCcCCeEEEEE
Confidence 344668899999999998643 4568999985320 10 001344544321 12368999
Q ss_pred cCCCCCCCeeEEEEEEcccccc--eecceEEEEecc
Q psy2441 175 TNSIEEDQGKYECVAENEVGTE--YSPSTMLYVKGT 208 (212)
Q Consensus 175 ~~~~~~d~g~y~C~a~n~~g~~--~~~~~~l~v~~~ 208 (212)
.+++.+|+|.|.|.+.+..+.. ... +.|.|.+.
T Consensus 86 ~~v~~~D~G~Y~C~v~~~~~~~~~~~~-v~L~V~~~ 120 (124)
T 1neu_A 86 HNLDYSDNGTFTCDVKNPPDIVGKTSQ-VTLYVFEK 120 (124)
T ss_dssp CSCCGGGCEEEEEEEEC----CCEEEE-EEEEEEC-
T ss_pred ccCChhhCEEEEEEEEcCCCCcCcEee-EEEEEecC
Confidence 9999999999999999876652 333 66666654
No 475
>2v5y_A Receptor-type tyrosine-protein phosphatase MU; membrane, hydrolase, glycoprotein, receptor protei tyrosine phosphatase, cell adhesion; HET: NAG; 3.10A {Homo sapiens}
Probab=98.96 E-value=2.8e-08 Score=80.87 Aligned_cols=178 Identities=13% Similarity=0.127 Sum_probs=108.4
Q ss_pred ceeeEEEeeccCCCcceecccccC---CCCCeEEeCCCccEEeeCCeEEEEcccCCCCCCcEE-EE--eCCEEecCCC--
Q psy2441 3 IGTYIKIKPNLFSPLSVYSADKIP---PGFPQITEAPSTKVVEISHTTVLHCSASGNPPPKIS-WI--REMLPVDTSR-- 74 (212)
Q Consensus 3 ~g~Y~C~~~~~~~~~~~~~~~~~~---~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~-W~--k~g~~l~~~~-- 74 (212)
.+.|+|.+.+..|........+.. ..+|.|. .+.+..+.+|+++.|.|.+.|.|.+.+. |+ ++|..+....
T Consensus 136 ~l~~~~va~~~~G~~~~~~v~~~~~~~~~~p~~~-~~~~~~v~~G~~v~l~C~~~g~P~p~i~~W~~~~~g~~l~~~~~~ 214 (731)
T 2v5y_A 136 QVIFEVITSGHQGYLAIDEVKVLGHPCTRTPHFL-RIQNVEVNAGQFATFQCSAIGRTVAGDRLWLQGIDVRDAPLKEIK 214 (731)
T ss_dssp EEEEEEEECSSCCEEEECCBEEESSCCSSSCEEC-CCCCEEEETTSCEEEEEEEESCCCTTCEEEEEESSSCCEEEEEEE
T ss_pred EEEEEEEecCCceEEEEeeEEeeecccccccccc-cccceEEeCCCcEEEEEEeCCCCCCceeEEEecCCCccccccceE
Confidence 367899888877765433322222 4677776 5668899999999999999999999988 88 6776654210
Q ss_pred -------CCeeEEeec--CCCCeEEEeeeCCc-------cceeEEeecCCCCCCCccccCCcceeEecCCcEEEEEeeee
Q psy2441 75 -------NPRYNLLTS--GAPGTYIKIKPNLF-------SPLSVYSADKIPPGFPQITEAPSTKVVEISHTTVLHCSASG 138 (212)
Q Consensus 75 -------~~~~~~~~~--~~~g~~l~i~~~~~-------~~~~v~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~ 138 (212)
...+.+... .+.|.|.|.+.+.. +.+.|.. + |.....+.... .....+.|.|....
T Consensus 215 ~~~~~~~~~~l~I~~~~~~d~g~Y~c~A~n~~G~~~s~~~~l~V~~----~---P~~~~~p~~~~-~~~~~v~l~w~~~~ 286 (731)
T 2v5y_A 215 VTSSRRFIASFNVVNTTKRDAGKYRCMIRTEGGVGISNYAELVVKE----P---PVPIAPPQLAS-VGATYLWIQLNANS 286 (731)
T ss_dssp ECCSSEEEEEEEECSCCTTTCEEEEEEEEETTEEEECCCEEEEEEC----C---CCBSSCCEEEE-ECSSCEEEECCCSS
T ss_pred EeccccceEEEEEcccccccCeEEEEEEECCCCCcceeeEEEEEec----C---CCCCCCcceec-cCCceEEEEeCCcc
Confidence 012333333 47888888877622 2233332 2 33333333332 34567888887633
Q ss_pred C----CCC--ceEEEeCCEEecCCCCCceEEcCCCCceeEEEcCCCCCCCeeEEEEEE--cccccce
Q psy2441 139 N----PPP--KISWIREMLPVDTSRNPRYNLLTSGAPGALQITNSIEEDQGKYECVAE--NEVGTEY 197 (212)
Q Consensus 139 ~----p~~--~i~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~a~--n~~g~~~ 197 (212)
. +.. .+.|...+.. ........ ...+.|.++...+...|.|.|. |..|...
T Consensus 287 ~~g~~~i~~Y~v~~~~~~~~-----~~~~~~~~---~~~~~i~~L~p~t~Y~~~V~A~~~N~~G~s~ 345 (731)
T 2v5y_A 287 INGDGPIVAREVEYCTASGS-----WNDRQPVD---STSYKIGHLDPDTEYEISVLLTRPGEGGTGS 345 (731)
T ss_dssp BSSCSCCCEEEEEEEESSSS-----CEEEEECC---SSEEEECSCCTTCEEEEEEEEECSSTTCSCC
T ss_pred cCCCCccEEEEEEEEECCCC-----ceEEeccC---cceEEEeCCCCCCEEEEEEEEEecCCCcccc
Confidence 2 111 3445443211 01111112 2678899998888888889999 9988765
No 476
>1u2h_A APEG-1, aortic preferentially expressed protein 1; structural genomics, IG-fold I-SET, RGD motif, homophilic adhesion, arterial smooth muscle cells; 0.96A {Homo sapiens}
Probab=98.96 E-value=1.9e-09 Score=64.99 Aligned_cols=46 Identities=22% Similarity=0.473 Sum_probs=41.5
Q ss_pred CCCeEEeCCCccEEeeCCeEEEEcccCCCCCCcEEEEeCCEEecCC
Q psy2441 28 GFPQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREMLPVDTS 73 (212)
Q Consensus 28 ~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~k~g~~l~~~ 73 (212)
.+|.+...+....+.+|+.+.|.|.+.+.|.+.+.|+|++..+...
T Consensus 4 ~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~~~~~~~~ 49 (99)
T 1u2h_A 4 APPTFKVSLMDQSVREGQDVIMSIRVQGEPKPVVSWLRNRQPVRPD 49 (99)
T ss_dssp EEEEEEECCCCEEEETTCCEEEEEEEEEESCCEEEEEETTEECCCB
T ss_pred CCCEEEEcCCceEecCCCEEEEEEEEEEcCCCEEEEEECCEECCCC
Confidence 4788888888999999999999999999999999999999988654
No 477
>3ux9_B SCFV antibody; five helices, long loop connecting helix, hydrophobic intera cytokine-immune system complex; 2.80A {Homo sapiens}
Probab=98.95 E-value=3e-09 Score=75.49 Aligned_cols=90 Identities=22% Similarity=0.374 Sum_probs=59.8
Q ss_pred CcceeEecCCcEEEEEeeeeC--CCCceEEEeCC--EEec---C-------CCCCceEEcCCCCceeEEEcCCCCCCCee
Q psy2441 119 PSTKVVEISHTTVLHCSASGN--PPPKISWIREM--LPVD---T-------SRNPRYNLLTSGAPGALQITNSIEEDQGK 184 (212)
Q Consensus 119 ~~~~~~~~g~~~~l~C~~~~~--p~~~i~W~~~~--~~~~---~-------~~~~~~~~~~~~~~~~l~i~~~~~~d~g~ 184 (212)
+....+.+|+.+.|.|.+.+. +.+.+.|+++. .... . ....++....++....|.|.+++.+|+|.
T Consensus 9 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~ 88 (256)
T 3ux9_B 9 PPSVSGAPGQRVTISCSGSSSNIGSNYVSWYQQLPGTAPKLLIYDNNQRPSGVPDRFSGSKSGTSASLAITGLQSEDEAD 88 (256)
T ss_dssp CSEEEECTTCCEEEEEECCTTTTTTSCCEEEEECTTSCCEEEEBTTTBCCTTCCTTEEEEEETTEEEEEECSCCGGGCEE
T ss_pred CCcEEEcCCCcEEEEEecCCCCCCCceEEEEEECCCCCCEEEEEecCCCCCCcCCcEEEEccCCEEEEEECCCChhhCEE
Confidence 345678899999999999887 77899999842 1110 0 01235544433334689999999999999
Q ss_pred EEEEEEccccc--ceecceEEEEecc
Q psy2441 185 YECVAENEVGT--EYSPSTMLYVKGT 208 (212)
Q Consensus 185 y~C~a~n~~g~--~~~~~~~l~v~~~ 208 (212)
|.|.+.|..+. .......|.|.+.
T Consensus 89 Y~C~~~~~~~~~~~~~~~~~l~V~~~ 114 (256)
T 3ux9_B 89 YYCQVRDNNENEWVFGGGTKLTVLGS 114 (256)
T ss_dssp EEEEEEETTTTEEEECCCEEEEEC--
T ss_pred EEEEEEECCCCceEECCCEEEEEECC
Confidence 99999986442 1112256666554
No 478
>4fmk_A Poliovirus receptor-related protein 2; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA MAN FUC; 2.56A {Mus musculus} PDB: 4fn0_A* 4fs0_A*
Probab=98.95 E-value=3.5e-09 Score=73.09 Aligned_cols=86 Identities=19% Similarity=0.196 Sum_probs=57.6
Q ss_pred ceeEecCCcEEEEEeeeeCCCC---ceEEEeCCEEecCC--------------CCCceEEc-------CCCCceeEEEcC
Q psy2441 121 TKVVEISHTTVLHCSASGNPPP---KISWIREMLPVDTS--------------RNPRYNLL-------TSGAPGALQITN 176 (212)
Q Consensus 121 ~~~~~~g~~~~l~C~~~~~p~~---~i~W~~~~~~~~~~--------------~~~~~~~~-------~~~~~~~l~i~~ 176 (212)
...+..|+++.|.|.+.+.+.+ .+.|+|++...... ...+.... ......+|.|.+
T Consensus 10 ~V~~~~G~~v~L~C~~~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sL~I~~ 89 (225)
T 4fmk_A 10 EVRGRLGGTVELPCHLLPPTTERVSQVTWQRLDGTVVAAFHPSFGVDFPNSQFSKDRLSFVRARPETNADLRDATLAFRG 89 (225)
T ss_dssp EEEEETTSCEEECCEECSSCCCEEEEEEEECTTSCEEEEEETTTEEECCCTTSCTTTEEECCCSCSCCSSCCBCCEEECS
T ss_pred EEEEecCCCEEEEEEEECCCCCceeEEEEEECCCcceEEEecccceeeccccccccceeeeccccccccccCcEEEEEcc
Confidence 3557789999999999888776 37899976433110 01111111 111236899999
Q ss_pred CCCCCCeeEEEEEEcccccceecceEEEEe
Q psy2441 177 SIEEDQGKYECVAENEVGTEYSPSTMLYVK 206 (212)
Q Consensus 177 ~~~~d~g~y~C~a~n~~g~~~~~~~~l~v~ 206 (212)
++.+|+|.|.|.+.|..|........+.+.
T Consensus 90 v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~ 119 (225)
T 4fmk_A 90 LRVEDEGNYTCEFATFPNGTRRGVTWLRVI 119 (225)
T ss_dssp CCGGGCEEEEEEEEEETTEEEEEEEEEEEE
T ss_pred CCHHHCcceEEEEEeCCCcceeeeeeeeee
Confidence 999999999999999877655542444443
No 479
>1x9q_A SCFV, 4M5.3 anti-fluorescein single chain antibody fragment; VERY high affinity, antibody binding, electrostatics, directed evolution; HET: FLU; 1.50A {Homo sapiens}
Probab=98.95 E-value=1.6e-09 Score=77.48 Aligned_cols=95 Identities=21% Similarity=0.308 Sum_probs=62.5
Q ss_pred CccccCCcceeEecCCcEEEEEeeeeCC-----CCceEEEeCC--EE---ec-------CCCCCceEEcCCCCceeEEEc
Q psy2441 113 PQITEAPSTKVVEISHTTVLHCSASGNP-----PPKISWIREM--LP---VD-------TSRNPRYNLLTSGAPGALQIT 175 (212)
Q Consensus 113 p~~~~~~~~~~~~~g~~~~l~C~~~~~p-----~~~i~W~~~~--~~---~~-------~~~~~~~~~~~~~~~~~l~i~ 175 (212)
+.+...+....+.+|+.+.|.|.+.+.+ .+.+.|+++. .. +. .....++....++...+|.|.
T Consensus 16 ~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~ 95 (268)
T 1x9q_A 16 VVMTQTPLSLPVSLGDQASISCRSSQSLVHSNGNTYLRWYLQKPGQSPKVLIYKVSNRVSGVPDRFSGSGSGTDFTLKIN 95 (268)
T ss_dssp CCEEEECSEECCCTTCCEEEEEEESSCCBCTTSCBCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEES
T ss_pred ceEEeeCCeEEecCCCCEEEEeEecCCcccccCCceEEEEEECCCCCCEEEEEecCCCCCCCcccEEEEcCCCEEEEEEC
Confidence 4445556667788999999999998877 4799999853 11 10 001245554433334689999
Q ss_pred CCCCCCCeeEEEEEEcccccceecceEEEEec
Q psy2441 176 NSIEEDQGKYECVAENEVGTEYSPSTMLYVKG 207 (212)
Q Consensus 176 ~~~~~d~g~y~C~a~n~~g~~~~~~~~l~v~~ 207 (212)
++..+|+|.|.|.+.|..+........|.|.+
T Consensus 96 ~v~~~DsG~Y~C~~~~~~~~~~~~~~~L~V~~ 127 (268)
T 1x9q_A 96 RVEAEDLGVYFCSQSTHVPWTFGGGTKLEIKS 127 (268)
T ss_dssp SCCGGGCEEEEEEECSSSSCEECCCEEEC---
T ss_pred CCChhHCEEEEEEEecCCCceEcCCEEEEEcc
Confidence 99999999999999987543222225555554
No 480
>2e7b_A Obscurin; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yz8_A
Probab=98.95 E-value=3e-09 Score=64.63 Aligned_cols=53 Identities=21% Similarity=0.288 Sum_probs=43.7
Q ss_pred CCCCeEEeCCCccEEeeCCeEEEEcccCCCCCCcEEEEeCCEEecCCCCCeeEEee
Q psy2441 27 PGFPQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREMLPVDTSRNPRYNLLT 82 (212)
Q Consensus 27 ~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~k~g~~l~~~~~~~~~~~~ 82 (212)
..+|.|...+.+..+.+|+.+.|.|.+.+.|.+ +.|+|++..+... .++.+..
T Consensus 6 ~~pp~~~~~~~~~~v~~G~~v~l~C~~~~~p~~-v~W~k~~~~l~~~--~~~~~~~ 58 (103)
T 2e7b_A 6 SGPVRFQEALKDLEVLEGGAATLRCVLSSVAAP-VKWCYGNNVLRPG--DKYSLRQ 58 (103)
T ss_dssp CCCCCCTBCCCCEEEESSSCEEEEEECSSCCCS-CEEEESSSBCCCS--SSEEEEE
T ss_pred CCCCEEEecCccEEEECCCcEEEEEEEeCCCCC-eEEEECCEECCCC--CcEEEEE
Confidence 357777788888999999999999999998888 9999999888654 4555543
No 481
>3omz_A Human vdelta1 gamma delta T cell receptor delta1A; immunoglobulin fold, immune surveillance of cell stress PROT A/B, MIC-A/B binding, epithelium; 3.04A {Homo sapiens}
Probab=98.95 E-value=4.4e-09 Score=74.80 Aligned_cols=95 Identities=16% Similarity=0.183 Sum_probs=53.4
Q ss_pred CccccCCcceeEecCCcEEEEEeeeeCCCCceEEEeCC--EEec---------------CCCCCceEE--cCCCCceeEE
Q psy2441 113 PQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREM--LPVD---------------TSRNPRYNL--LTSGAPGALQ 173 (212)
Q Consensus 113 p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~--~~~~---------------~~~~~~~~~--~~~~~~~~l~ 173 (212)
|.+...+....+.+|+.+.|.|.+.+.+.+.+.|++.. .... .....++.. .......+|.
T Consensus 3 ~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~ 82 (259)
T 3omz_A 3 SNLEGRTKSVIRQTGSSAEITCDLAEGSTGYIHWYLHQEGKAPQRLLYYDSYTSSVVLESGISPGKYDTYGSTRKNLRMI 82 (259)
T ss_dssp --------CEEEETTCCEEEECCC-----CEEEEEEECTTSCCEEEEEEETTTCCEEECTTCCBTTEEEECC--CCCEEE
T ss_pred cccccCCceeEecCCCcEEEEEEEccCCCcEEEEEEECCCCCcEEEEEEecCcCccccCCCCCcceeEeecCCCCeEEEE
Confidence 45555667788999999999999999888999999821 1100 000011111 1112246799
Q ss_pred EcCCCCCCCeeEEEEEEcccc---cceecceEEEEecc
Q psy2441 174 ITNSIEEDQGKYECVAENEVG---TEYSPSTMLYVKGT 208 (212)
Q Consensus 174 i~~~~~~d~g~y~C~a~n~~g---~~~~~~~~l~v~~~ 208 (212)
|.++..+|+|.|.|.+.|..+ ..... ..|.|.+.
T Consensus 83 I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~-~~l~V~~~ 119 (259)
T 3omz_A 83 LRNLIENDSGVYYCATWDQNYYKKLFGSG-TSLVVTDK 119 (259)
T ss_dssp ESSCCGGGCEEEEEEEECTTSSCEEECCC-EEEEEEC-
T ss_pred ECCCCcccCEEEEEEEeeCCccccEECCC-CEEEEecC
Confidence 999999999999999998765 22223 56666653
No 482
>3tf7_C 42F3 MUT7 SCFV (42F3 alpha chain, linker, 42F3 BE; IG and MHC, antigen recognition, TCR-PMHC, membrane receptor system; 2.75A {Mus musculus}
Probab=98.95 E-value=9.4e-09 Score=72.97 Aligned_cols=94 Identities=15% Similarity=0.190 Sum_probs=63.5
Q ss_pred ccccCCcceeEecCCcEEEEEeeeeCCCCceEEEeCC--EEec----C-------CCCCceEE--cCCCCceeEEEcCCC
Q psy2441 114 QITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREM--LPVD----T-------SRNPRYNL--LTSGAPGALQITNSI 178 (212)
Q Consensus 114 ~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~--~~~~----~-------~~~~~~~~--~~~~~~~~l~i~~~~ 178 (212)
.+...+....+.+|+.+.|.|.+.+.|.+.+.|++.. .... . ....++.. .......+|.|.++.
T Consensus 5 ~v~q~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~sL~I~~v~ 84 (256)
T 3tf7_C 5 SVTQPDARVTVSEGASLQLRCKYSYSATPYLFWYVQYPRQGPQMLLKYYSGDPVVQGVNGFEAEFSKSDSSFHLRKASVH 84 (256)
T ss_dssp EEECSCSEEEEETTSCEEECCEEECSSCCEEEEEEECTTSCCEEEEEECSSCSEEECSTTCEEEEETTTTEEEEEESSCC
T ss_pred EEEecCceEEecCCCeEEEEEEeCCCCCceEEEEEECCCCCeEEEEEEccCCcccccCCCeEEEEcCCCCEEEEEECCCC
Confidence 3445566778899999999999999999999999832 1100 0 01234443 222334689999999
Q ss_pred CCCCeeEEEEEEcccccc---eecceEEEEec
Q psy2441 179 EEDQGKYECVAENEVGTE---YSPSTMLYVKG 207 (212)
Q Consensus 179 ~~d~g~y~C~a~n~~g~~---~~~~~~l~v~~ 207 (212)
.+|+|.|.|.+.|..+.. ......|.|..
T Consensus 85 ~~DsG~Y~C~~~~~~~~~~~~~~~~~~l~V~~ 116 (256)
T 3tf7_C 85 RSDSAVYFCAVSAKGTGSKLSFGKGAKLTVSP 116 (256)
T ss_dssp GGGCSEEEEEEECTTCTTCEEECCCEEEEEEC
T ss_pred cccCEEEEEEEecCCCccceEECCCeEEEEeC
Confidence 999999999999875421 11125666654
No 483
>3r0n_A Poliovirus receptor-related protein 2; IG-domain, cell-adhesion molecule, virus entry receptor, STR genomics, PSI-biology; 1.30A {Homo sapiens} PDB: 4dfh_A 4dfi_A
Probab=98.95 E-value=5e-09 Score=66.33 Aligned_cols=85 Identities=19% Similarity=0.286 Sum_probs=57.1
Q ss_pred CcceeEecCCcEEEEEeeeeCCCC----ceEEEeCC----------------EEecCC--CCCceEEcCCC---------
Q psy2441 119 PSTKVVEISHTTVLHCSASGNPPP----KISWIREM----------------LPVDTS--RNPRYNLLTSG--------- 167 (212)
Q Consensus 119 ~~~~~~~~g~~~~l~C~~~~~p~~----~i~W~~~~----------------~~~~~~--~~~~~~~~~~~--------- 167 (212)
+....+.+|+.+.|.|.....+.+ .+.|+++. ...... ...|+.+..+.
T Consensus 9 p~~v~~~~G~~v~L~C~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~g~~~~~ 88 (128)
T 3r0n_A 9 LPEVRGQLGGTVELPCHLLPPVPGLYISLVTWQRPDAPANHQNVAAFHPKMGPSFPSPKPGSERLSFVSAKQSTGQDTEA 88 (128)
T ss_dssp CSEEECCTTSCEEECCEEESCCTTCEEEEEEEECTTSCGGGCEEEEEETTTEEECCSSSSCGGGEEESSCBCCCSTTCCC
T ss_pred CCeEEEEcCCCEEEEEEeecCCCCCcEEEEEEEEeCCCCCCeeEEEEecccCcccccccccCCcEEEecccccccccccc
Confidence 344567789999999999877655 89999962 111110 12355444431
Q ss_pred --CceeEEEcCCCCCCCeeEEEEEEc-ccccceecceEEE
Q psy2441 168 --APGALQITNSIEEDQGKYECVAEN-EVGTEYSPSTMLY 204 (212)
Q Consensus 168 --~~~~l~i~~~~~~d~g~y~C~a~n-~~g~~~~~~~~l~ 204 (212)
...+|.|.+++.+|+|.|.|.+.+ ..|..... +.|.
T Consensus 89 ~~~~~sL~I~~v~~~D~G~Y~C~v~~~~~g~~~~~-~~L~ 127 (128)
T 3r0n_A 89 ELQDATLALHGLTVEDEGNYTCEFATFPKGSVRGM-TWLR 127 (128)
T ss_dssp BCSBCCEEECSCCGGGCEEEEEEEEEETTEEEEEE-EEEE
T ss_pred CCCCeEEEEccCCchhCeEEEEEEEeCCCCCcccE-EEEE
Confidence 135899999999999999998765 44665544 5544
No 484
>1sq2_N Novel antigen receptor; immunoglobulin fold, protein-protein complex, hydrolase/immune system complex; 1.45A {Ginglymostoma cirratum} SCOP: b.1.1.1 PDB: 1t6v_N
Probab=98.95 E-value=3e-09 Score=65.92 Aligned_cols=75 Identities=20% Similarity=0.333 Sum_probs=53.3
Q ss_pred CCcceeEecCCcEEEEEeeeeCC--CCceEEEeCC--EEec--CCCCCceEEc--CCCCceeEEEcCCCCCCCeeEEEEE
Q psy2441 118 APSTKVVEISHTTVLHCSASGNP--PPKISWIREM--LPVD--TSRNPRYNLL--TSGAPGALQITNSIEEDQGKYECVA 189 (212)
Q Consensus 118 ~~~~~~~~~g~~~~l~C~~~~~p--~~~i~W~~~~--~~~~--~~~~~~~~~~--~~~~~~~l~i~~~~~~d~g~y~C~a 189 (212)
.+....+.+|+++.|.|.+.+.+ .+.+.|+++. .... .....++... .......|.|.++..+|+|.|.|.+
T Consensus 6 ~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~~~~~DsG~Y~C~~ 85 (113)
T 1sq2_N 6 TPRSVTKETGESLTINCVLRDASYALGSTCWYRKKSGEGNEESISKGGRYVETVNSGSKSFSLRINDLTVEDGGTYRCGL 85 (113)
T ss_dssp ECSEEEECTTCCEEEEEEECSCSSCCCCEEEEEEETTSCCCEECCCBTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEE
T ss_pred CCccEEEecCCCEEEEEEECCCcCCCCEEEEEEeCCCCCceEeEEeCCCEEEEEeCCCCEEEEEECCCChhhCEEEEEEE
Confidence 45556788999999999997765 5689999853 2111 0112455433 1223478999999999999999999
Q ss_pred Ecc
Q psy2441 190 ENE 192 (212)
Q Consensus 190 ~n~ 192 (212)
.+.
T Consensus 86 ~~~ 88 (113)
T 1sq2_N 86 GVA 88 (113)
T ss_dssp CBT
T ss_pred EeC
Confidence 873
No 485
>1nct_A Titin; cell adhesion, glycoprotein, transmembrane, repeat, brain, immunoglobulin fold, alternative splicing, signal, muscle protein; NMR {Homo sapiens} SCOP: b.1.1.4 PDB: 1ncu_A 1tnm_A 1tnn_A
Probab=98.94 E-value=1.2e-09 Score=66.98 Aligned_cols=76 Identities=22% Similarity=0.343 Sum_probs=56.5
Q ss_pred CCCCeEEeCCCccEEeeCCeEEEEcccCCCCCCcEEEEeCCEEecCCCCCeeEEeecCCCCeEEEeeeCCccceeEEee
Q psy2441 27 PGFPQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREMLPVDTSRNPRYNLLTSGAPGTYIKIKPNLFSPLSVYSA 105 (212)
Q Consensus 27 ~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~k~g~~l~~~~~~~~~~~~~~~~g~~l~i~~~~~~~~~v~~~ 105 (212)
..+|.|...|....+.+|+.+.|.|.+.|.|.+.+.|+|+|..+... .++.+... +....|.|.++...+...|.+
T Consensus 12 ~~~~~i~~~p~~~~v~~G~~v~L~C~~~g~p~p~v~W~k~g~~l~~~--~~~~~~~~-~~~~~L~I~~v~~~D~G~Y~C 87 (106)
T 1nct_A 12 TLAARILTKPRSMTVYEGESARFSCDTDGEPVPTVTWLRKGQVLSTS--ARHQVTTT-KYKSTFEISSVQASDEGNYSV 87 (106)
T ss_dssp SCCCEEEECCCCEEESSSSCEECCEEEECSSCCBCCBCSSSSCCTTC--SSEEEEEC-SSEEEEEECCCCSSCCSEEEE
T ss_pred CCCCEEEECCCCEEEeCCCcEEEEEEEEEcCCCEEEEEECCEECCCC--CCEEEEEC-CCEEEEEECcCCchhCEEEEE
Confidence 46788999999999999999999999999999999999999888765 56655543 233445555554444444443
No 486
>3u6r_L Antibody 1:7 (light chain); IG-like domain, neutralizing single chain FV, immune system; 2.67A {Homo sapiens}
Probab=98.94 E-value=1.1e-08 Score=65.92 Aligned_cols=90 Identities=21% Similarity=0.311 Sum_probs=60.7
Q ss_pred cCCcceeEecCCcEEEEEeeeeCCCCceEEEeCC--E---Eec-C------CCCCceEEcCCCCceeEEEcCCCCCCCee
Q psy2441 117 EAPSTKVVEISHTTVLHCSASGNPPPKISWIREM--L---PVD-T------SRNPRYNLLTSGAPGALQITNSIEEDQGK 184 (212)
Q Consensus 117 ~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~~--~---~~~-~------~~~~~~~~~~~~~~~~l~i~~~~~~d~g~ 184 (212)
..+....+.+|+.+.|.|.+...+...+.|++.. . .+- . ....|+.........+|.|.+++.+|+|.
T Consensus 5 Q~p~~v~v~~G~~vtL~C~~s~~~~~~v~Wyrq~~g~~~~~li~~~~~~~~~~~~Rfs~~~~~~~~sL~I~~l~~~DsG~ 84 (143)
T 3u6r_L 5 QSPATLSLSPGERATLSCRASQSVNKYLAWYQQKPGQAPRLLIYDASNRATGIPARFSGSGSGTDFTLTISNLEPEDFAV 84 (143)
T ss_dssp EECSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEECSCCGGGCEE
T ss_pred ECCCEEEEeCCCCEEEEEEECCCCceeeEEEEECCCCCCEEEEEeCCccCCCccCcEeEEccCCEEEEEEccCcccCCEE
Confidence 3455577889999999999987766789999842 1 111 0 11345554433335789999999999999
Q ss_pred EEEEEEcccccceecceEEEEec
Q psy2441 185 YECVAENEVGTEYSPSTMLYVKG 207 (212)
Q Consensus 185 y~C~a~n~~g~~~~~~~~l~v~~ 207 (212)
|.|.+.+.. ........|.|+.
T Consensus 85 Y~C~~~~~~-~~fg~gt~L~V~~ 106 (143)
T 3u6r_L 85 YYCQQRSDW-VTFGGGTKVEIKA 106 (143)
T ss_dssp EEEEECSSB-CEECCCEEEEEC-
T ss_pred EEEEEecCC-CEECCCEEEEECC
Confidence 999998754 2222226666654
No 487
>2v9t_A Roundabout homolog 1; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens}
Probab=98.94 E-value=1.8e-09 Score=67.23 Aligned_cols=48 Identities=33% Similarity=0.575 Sum_probs=42.9
Q ss_pred CCCCCeEEeCCCccEEeeCCeEEEEcccCCCCCCcEEEEeCCEEecCC
Q psy2441 26 PPGFPQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREMLPVDTS 73 (212)
Q Consensus 26 ~~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~k~g~~l~~~ 73 (212)
+..+|.+...|....+.+|+.+.|.|.+.|.|.|.+.|+|++..+...
T Consensus 6 ~~~pP~i~~~p~~~~v~~G~~v~L~C~~~g~P~p~v~W~k~~~~~~~~ 53 (117)
T 2v9t_A 6 EDFPPRIVEHPSDLIVSKGEPATLNCKAEGRPTPTIEWYKGGERVETD 53 (117)
T ss_dssp CCEEEEEEECCCCEEECTTCCEEECCEEEEESCCEEEEEETTEECCCT
T ss_pred ccCCCeeEcCCCCEEEcCCCcEEEEEECCccCCCeEEEEECCEecccc
Confidence 357889998899999999999999999999999999999999887643
No 488
>3bj9_1 Immunoglobulin IOTA chain, immunoglobulin lambda- like polypeptide 1; immunoglobulin domain, beta sheet, polymorphism, immune system; 2.00A {Homo sapiens} PDB: 2h3n_A
Probab=98.94 E-value=1.2e-08 Score=63.48 Aligned_cols=87 Identities=20% Similarity=0.270 Sum_probs=56.3
Q ss_pred ceeEecCCcEEEEEeeeeC---CCCceEEEeCC--E---Eec-----------CCCCCceEEcCCCC--ceeEEEcCCCC
Q psy2441 121 TKVVEISHTTVLHCSASGN---PPPKISWIREM--L---PVD-----------TSRNPRYNLLTSGA--PGALQITNSIE 179 (212)
Q Consensus 121 ~~~~~~g~~~~l~C~~~~~---p~~~i~W~~~~--~---~~~-----------~~~~~~~~~~~~~~--~~~l~i~~~~~ 179 (212)
...+.+|+++.|.|..... +...+.|++.. . .+- .....|+....+.. ..+|.|.++..
T Consensus 7 ~~~~~~G~~v~L~C~~~~~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~~~~ 86 (116)
T 3bj9_1 7 AMSSALGTTIRLTCTLRNDHDIGVYSVYWYQQRPGHPPRFLLRYFSQSDKSQGPQVPPRFSGSKDVARNRGYLSISELQP 86 (116)
T ss_dssp EEEEETTCCEEEEEEECSSSCGGGCCEEEEEECTTSCCEEEEEEEETTEEEECTTCCTTEEEEEEGGGTEEEEEECSCCG
T ss_pred cEEEcCCCcEEEEEEeecCccCCCceEEEEEeCCCCCcEEEEEEecCCCceeCccCCCcEEEEecCCCceEEEEECCCCh
Confidence 4678899999999998754 45689999743 1 110 00124554433221 24899999999
Q ss_pred CCCeeEEEEEEcccccceecceEEEEec
Q psy2441 180 EDQGKYECVAENEVGTEYSPSTMLYVKG 207 (212)
Q Consensus 180 ~d~g~y~C~a~n~~g~~~~~~~~l~v~~ 207 (212)
+|+|.|.|.+.+...........|.|..
T Consensus 87 ~DsG~Y~C~~~~~~~~~fg~gT~L~V~~ 114 (116)
T 3bj9_1 87 EDEAMYYCAMGARSTHVFGSGTQLTVLS 114 (116)
T ss_dssp GGCEEEEEEECCSSCCEECCCEEEEEES
T ss_pred hHCEEEEEEEeCCCCcEECCCEEEEEec
Confidence 9999999999875332222225666654
No 489
>2ghw_B Anti-SARS SCFV antibody, 80R; S protein, neutralizing antibody, virus/viral protein/antibiotic complex; 2.30A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1
Probab=98.94 E-value=5.6e-09 Score=73.61 Aligned_cols=102 Identities=15% Similarity=0.131 Sum_probs=61.3
Q ss_pred ceeeEEEeeccCCCcc-eecccccCC---------------CCCeEEeCCCccEEeeCCeEEEEcccCCCCCCcEEEEe-
Q psy2441 3 IGTYIKIKPNLFSPLS-VYSADKIPP---------------GFPQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIR- 65 (212)
Q Consensus 3 ~g~Y~C~~~~~~~~~~-~~~~~~~~~---------------~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~k- 65 (212)
+|.|+|.+.|..+... .....+.+. .++.+...+....+.+|+.+.|.|.+.+.|.+.+.|||
T Consensus 93 ~G~Y~C~~~n~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~ 172 (247)
T 2ghw_B 93 TAVYYCARDRSYYLDYWGQGTLVTVSSGGGGSGGGGSGGGGSETTLTQSPATLSLSPGERATLSCRASQSVRSNLAWYQQ 172 (247)
T ss_dssp CEEEEEEEEETTEEEEECCCEEEEECSCC------------CCCCEEEECSEEEECTTSCEEEEEEESSCCTTCEEEEEE
T ss_pred CEEEEEeeeccCCccccCCceEEEEecccccccccccCCCCcceEEEccCCEEEecCCCcEEEEEEeCCCccceEEEEEE
Confidence 5999999998722111 111122222 24556666777889999999999999998888999999
Q ss_pred -CCEEec----------CCCCCeeEEeecCCCCeEEEeeeCCccceeEEee
Q psy2441 66 -EMLPVD----------TSRNPRYNLLTSGAPGTYIKIKPNLFSPLSVYSA 105 (212)
Q Consensus 66 -~g~~l~----------~~~~~~~~~~~~~~~g~~l~i~~~~~~~~~v~~~ 105 (212)
+|..+. .....|+.+... +....|.|.++...+...|.+
T Consensus 173 ~~g~~~~~~~~~~~~~~~~~~~r~~~~~~-~~~~~L~I~~v~~~D~G~Y~C 222 (247)
T 2ghw_B 173 KPGQAPRPLIYDASTRATGIPDRFSGSGS-GTDFTLTISRLEPEDFAVYYC 222 (247)
T ss_dssp CTTSCCEEEEETTTEECTTCCTTEEEECS-SSEEEEEECSCCGGGCEEEEE
T ss_pred CCCCCcEEEEEEeccCCCccCCCEEEecC-CCeEEEEECcCCHHHCEEEEE
Confidence 554331 111244444322 233345555555555555544
No 490
>3irg_B Obscurin-like protein 1; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_B 2wp3_O* 2wwm_C 2wwk_O
Probab=98.94 E-value=2.7e-09 Score=65.27 Aligned_cols=53 Identities=23% Similarity=0.383 Sum_probs=45.9
Q ss_pred CCCCeEEeCCCccEEeeCCeEEEEcccCCCCCCcEEEEeCCEEecCCCCCeeEEe
Q psy2441 27 PGFPQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREMLPVDTSRNPRYNLL 81 (212)
Q Consensus 27 ~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~k~g~~l~~~~~~~~~~~ 81 (212)
..+|.+...+....+.+|+.+.|.|.+.+.|.+.+.|+|++..+... .++.+.
T Consensus 11 ~~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~i~W~~~~~~~~~~--~~~~~~ 63 (107)
T 3irg_B 11 GSPPCFLRFPRPVRVVSGAEAELKCVVLGEPPPVVVWEKGGQQLAAS--ERLSFP 63 (107)
T ss_dssp CEEEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCC--SSEECC
T ss_pred CCCCeeEcCCccEEEeCCCeEEEEEEEeecCCCEEEEEECCeECCCC--CcEEEE
Confidence 57889998999999999999999999999999999999999988765 555443
No 491
>4gjt_B Poliovirus receptor-related protein 4; six-bladed -propeller, IGV-like fold, viral entry, MV-H, NEC BETA4/BETA5 groove; HET: NAG; 3.10A {Homo sapiens}
Probab=98.93 E-value=5.3e-09 Score=65.80 Aligned_cols=88 Identities=19% Similarity=0.337 Sum_probs=56.5
Q ss_pred CcceeEecCCcEEEEEeeeeCCCC---ceEEEeCCEEecC--------C--------CCCceEEcCC---CCceeEEEcC
Q psy2441 119 PSTKVVEISHTTVLHCSASGNPPP---KISWIREMLPVDT--------S--------RNPRYNLLTS---GAPGALQITN 176 (212)
Q Consensus 119 ~~~~~~~~g~~~~l~C~~~~~p~~---~i~W~~~~~~~~~--------~--------~~~~~~~~~~---~~~~~l~i~~ 176 (212)
+....+..|+++.|.|.+.+.+.. .+.|++....... . ...|+.+... ....+|.|.+
T Consensus 7 p~~vtv~~G~~v~L~C~~~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~ 86 (123)
T 4gjt_B 7 SDVVTVVLGQDAKLPCFYRGDSGEQVGQVAWARVDAGEGAQELALLHSKYGLHVSPAYEGRVEQPPPPRNPLDGSVLLRN 86 (123)
T ss_dssp CSEEECCTTSEEEECCEECCCTTCCEEEEEEEECCCSSCCCEEEEECSSSCCCBCGGGTTTEECCCSSCCTTBCCEEEES
T ss_pred CCEEEEEcCCCEEEEEEEeCCccCceeEEEEEEcCCCCCcceeEEEEecCCcEeCccceeEEEEecCCCcCCEEEEEECC
Confidence 344667889999999998766543 5789985421110 0 0123333221 1246899999
Q ss_pred CCCCCCeeEEEEEEc-ccccceecceEEEEec
Q psy2441 177 SIEEDQGKYECVAEN-EVGTEYSPSTMLYVKG 207 (212)
Q Consensus 177 ~~~~d~g~y~C~a~n-~~g~~~~~~~~l~v~~ 207 (212)
++.+|+|.|.|.+.+ ..|..... +.|.|-+
T Consensus 87 v~~~DsG~Y~C~v~t~~~g~~~~~-~~L~VlE 117 (123)
T 4gjt_B 87 AVQADEGEYECRVSTFPAGSFQAR-LRLRVLE 117 (123)
T ss_dssp CCSSSCSEEEEEEEESSSCEEEEE-EEEEC--
T ss_pred CChHHCEEEEEEEEECCCCeEEeE-EEEEEEE
Confidence 999999999998875 45665555 6666654
No 492
>2edh_A Obscurin; structural genomics, NPPSFA, national project on P structural and functional analyses, riken structural genomics/proteomics initiative; NMR {Homo sapiens}
Probab=98.93 E-value=1.2e-08 Score=63.02 Aligned_cols=78 Identities=17% Similarity=0.145 Sum_probs=53.5
Q ss_pred ccccC-CCCCeEEeCCCccEEeeCCeEEEEcccCCCCCCcEEEEeCCEEecCCCCCeeEEeecCCCCeEEEeeeCCccce
Q psy2441 22 ADKIP-PGFPQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREMLPVDTSRNPRYNLLTSGAPGTYIKIKPNLFSPL 100 (212)
Q Consensus 22 ~~~~~-~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~k~g~~l~~~~~~~~~~~~~~~~g~~l~i~~~~~~~~ 100 (212)
..+.+ ..+|.|...+.+..+.+|+++.|.|.+.+. +.+.|||++..+... .++.+... +....|.|.++...+.
T Consensus 11 ~~l~V~~~pp~~~~~~~~~~v~~G~~v~l~C~~~~~--p~v~W~k~~~~l~~~--~~~~~~~~-~~~~~L~I~~v~~~D~ 85 (113)
T 2edh_A 11 AMLTVRALPIKFTEGLRNEEATEGATAVLRCELSKM--APVEWWKGHETLRDG--DRHSLRQD-GARCELQIRGLVAEDA 85 (113)
T ss_dssp CCCCCCCSCCCEEECCCCCEECTTSCEEEEEEESSC--CCCEEEESSSBCCCS--SSEEEEEE-TTEEEEEECSCCSTTC
T ss_pred EEEEEEcCCCcccccCCceEEeCCCeEEEEEEECCC--CcEEEEECCEECCCC--CcEEEEEC-CCEEEEEECCCChhhC
Confidence 44455 466788888999999999999999999764 679999999988765 56655543 2223344444444333
Q ss_pred eEEe
Q psy2441 101 SVYS 104 (212)
Q Consensus 101 ~v~~ 104 (212)
..|.
T Consensus 86 G~Y~ 89 (113)
T 2edh_A 86 GEYL 89 (113)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 3333
No 493
>2dlt_A Myosin binding protein C, fast-type; IG-like domain, mybpc2, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=98.92 E-value=3.5e-09 Score=64.76 Aligned_cols=52 Identities=17% Similarity=0.312 Sum_probs=43.7
Q ss_pred CCCCeEEeCCCccEEeeCCeEEEEcccCCCCCCcEEEEeCCEEecCCCCCeeEEe
Q psy2441 27 PGFPQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREMLPVDTSRNPRYNLL 81 (212)
Q Consensus 27 ~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~k~g~~l~~~~~~~~~~~ 81 (212)
..+|.|...+.+..+.+|+.+.|.|.+.+.|.+ +.|||+|..+... .++.+.
T Consensus 6 ~~~p~~~~~~~~~~v~~G~~v~l~C~~~~~~~~-v~W~k~g~~~~~~--~~~~~~ 57 (106)
T 2dlt_A 6 SGQLEVLQDIADLTVKAAEQAVFKCEVSDEKVT-GKWYKNGVEVRPS--KRITIS 57 (106)
T ss_dssp CCCCCEEECCCCEEEESSCCEECCCEESCSSCE-EEEEESSCBCCCC--SSCEEE
T ss_pred CCCCEEecCCCCeEEeCCCeEEEEEEEcCCCcc-eEEEcCCEECcCC--CCEEEE
Confidence 357888899999999999999999999988877 9999999988765 444443
No 494
>2eny_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.92 E-value=2.1e-09 Score=65.57 Aligned_cols=54 Identities=20% Similarity=0.238 Sum_probs=43.4
Q ss_pred CCCCeEEeCCCccEEeeCCeEEEEcccCCCCC-CcEEEEeCCEEecCCCCCeeEEee
Q psy2441 27 PGFPQITEAPSTKVVEISHTTVLHCSASGNPP-PKISWIREMLPVDTSRNPRYNLLT 82 (212)
Q Consensus 27 ~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~-~~v~W~k~g~~l~~~~~~~~~~~~ 82 (212)
..++.|...+.+..+.+|+.+.|.|.+.+.|. +.+.|||+|.++... .++.+..
T Consensus 6 ~~p~~~~~~~~~~~v~~G~~v~l~C~v~~~~~~~~v~W~k~g~~i~~~--~r~~~~~ 60 (104)
T 2eny_A 6 SGHVGITKRLKTMEVLEGESCSFECVLSHESASDPAMWTVGGKTVGSS--SRFQATR 60 (104)
T ss_dssp CCCCCCSBCCCCEEEESSCCEEEEEECSSCCCSSCBCCBSSSSBCSBC--SSCEEEE
T ss_pred cCCCEEEecCCCcEEcCCCcEEEEEEEcCCCCCceeEEEECCEECCCC--CCEEEEE
Confidence 45667778888999999999999999988775 479999999988765 4555443
No 495
>2p1y_A Bispecific alpha/beta TCR; autoimmunity, immunoglobulin fold, diabody, immune system; 2.42A {Mus musculus} PDB: 1bwm_A
Probab=98.92 E-value=1.5e-08 Score=70.96 Aligned_cols=77 Identities=17% Similarity=0.236 Sum_probs=54.0
Q ss_pred cCCcceeEecCCcEEEEEeeeeCCCCceEEEeC--CEEec-------------CCCCCceEEcC-CCCceeEEEcCCCCC
Q psy2441 117 EAPSTKVVEISHTTVLHCSASGNPPPKISWIRE--MLPVD-------------TSRNPRYNLLT-SGAPGALQITNSIEE 180 (212)
Q Consensus 117 ~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~--~~~~~-------------~~~~~~~~~~~-~~~~~~l~i~~~~~~ 180 (212)
..+....+.+|+.+.|.|. .+.|.+.+.|+++ +.... .....++.... .....+|.|.+++.+
T Consensus 5 q~p~~~~v~~G~~v~L~C~-~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~ 83 (238)
T 2p1y_A 5 QSPRNKVAVTGGKVTLSCN-QTNNHNNMYWYRQDTGHGLRLIHYSYGAGSTEKGDIPDGYKASRPSQENFSLILELATPS 83 (238)
T ss_dssp EECSEEEEETTCCEEEEEE-ECSCCSEEEEEEEETTTEEEEEEEESSTTCCEECSSCTTCEEECCSSSBCEEEESSCCGG
T ss_pred ECccceEEeCCCEEEEEee-cCCCCccEEEEEECCCCCcEEEEEEecCcceeCCCccceEEEEccCCceEEEEEecCCcc
Confidence 3455677899999999999 7888899999985 21110 11123554443 222468999999999
Q ss_pred CCeeEEEEEEcccc
Q psy2441 181 DQGKYECVAENEVG 194 (212)
Q Consensus 181 d~g~y~C~a~n~~g 194 (212)
|+|.|.|.+.|..|
T Consensus 84 DsG~Y~C~~~~~~g 97 (238)
T 2p1y_A 84 QTSVYFCASGDLGQ 97 (238)
T ss_dssp GCEEEEEEEEC---
T ss_pred cCeeEEEEEEeCCC
Confidence 99999999999765
No 496
>2edf_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.92 E-value=4.2e-09 Score=64.02 Aligned_cols=52 Identities=17% Similarity=0.400 Sum_probs=43.5
Q ss_pred CCCCeEEeCCCccEEeeCCeEEEEcccCCCCCCcEEEEeCCEEecCCCCCeeEEe
Q psy2441 27 PGFPQITEAPSTKVVEISHTTVLHCSASGNPPPKISWIREMLPVDTSRNPRYNLL 81 (212)
Q Consensus 27 ~~~p~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~v~W~k~g~~l~~~~~~~~~~~ 81 (212)
..+|.+...+....+.+|+.+.|.|.+.+ |.+.+.|+|++..+... .++.+.
T Consensus 6 ~~pp~~~~~~~~~~v~~G~~v~l~C~~~~-~~~~v~W~k~g~~~~~~--~~~~~~ 57 (103)
T 2edf_A 6 SGPAAIIKPLEDQWVAPGEDVELRCELSR-AGTPVHWLKDRKAIRKS--QKYDVV 57 (103)
T ss_dssp CCCCCEEECCCCEEECTTSCEEECCEESS-SSCCCCEEESSCBCCCS--SSEEEE
T ss_pred CCCcEEEecCCccEEcCCCCEEEEEEEeC-CCCcEEEEECCEEccCC--CCEEEE
Confidence 46788888888999999999999999987 77889999999988765 455444
No 497
>3q5y_A TCR N15 beta; IG, T cell receptor, antigen peptide/MHC, membrane, immune S; HET: EPE; 1.90A {Mus musculus} PDB: 1nfd_B* 3q5t_A
Probab=98.92 E-value=2.1e-08 Score=70.34 Aligned_cols=92 Identities=17% Similarity=0.292 Sum_probs=60.1
Q ss_pred ccccCCcceeEecCCcEEEEEeeeeCCCCceEEEeC--------------CEEecC-CCCCceEEcCC-CCceeEEEcCC
Q psy2441 114 QITEAPSTKVVEISHTTVLHCSASGNPPPKISWIRE--------------MLPVDT-SRNPRYNLLTS-GAPGALQITNS 177 (212)
Q Consensus 114 ~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~--------------~~~~~~-~~~~~~~~~~~-~~~~~l~i~~~ 177 (212)
.+...+....+.+|+.+.|.|.+.+ +.+.+.|++. +..... ....++....+ ....+|.|.++
T Consensus 4 ~v~~~p~~v~v~~G~~v~L~C~~~~-~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~~v 82 (240)
T 3q5y_A 4 GVVQSPRHIIKEKGGRSVLTCIPIS-GHSNVVWYQQTLGKELKFLIQHYEKVERDKGFLPSRFSVQQFDDYHSEMNMSAL 82 (240)
T ss_dssp CCEEECSEEEEETTCCEEEEEECCT-TCCEEEEEEECTTSCCEEEEEEETTEEEEECSCCTTEEEEECTTSCEEEEECSC
T ss_pred ccccCcceeeecCCCcEEEEEEeCC-CCceEEEEEECCCCCCEEEEEEcCCccccCcccCCeEEEEeCCCCEEEEEECcC
Confidence 3444566677899999999999875 7779999982 111111 11245554432 23478999999
Q ss_pred CCCCCeeEEEEEEc--ccccceecceEEEEe
Q psy2441 178 IEEDQGKYECVAEN--EVGTEYSPSTMLYVK 206 (212)
Q Consensus 178 ~~~d~g~y~C~a~n--~~g~~~~~~~~l~v~ 206 (212)
+.+|+|.|.|.+.+ ...........+.|.
T Consensus 83 ~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~ 113 (240)
T 3q5y_A 83 ELEDSAMYFCASSLRWGDEQYFGPGTRLTVL 113 (240)
T ss_dssp CGGGCEEEEEEEESSTTBCCEECCCEEEEEE
T ss_pred ChhHCEEEEEEEccCCCcceEEcCCEEEEEe
Confidence 99999999999973 222222222566665
No 498
>3juy_B 3B3 single chain variant HIV-1 antibody; envelope protein GP120, broadly neutralizing antibody, 3B3 single chain variable fragment, immune system; 2.50A {Homo sapiens}
Probab=98.92 E-value=8.7e-09 Score=73.10 Aligned_cols=80 Identities=18% Similarity=0.289 Sum_probs=58.1
Q ss_pred CccccCCcceeEecCCcEEEEEeeeeC--CCCceEEEeCC--EEe---------------cCCCCCceEEc--CCCCcee
Q psy2441 113 PQITEAPSTKVVEISHTTVLHCSASGN--PPPKISWIREM--LPV---------------DTSRNPRYNLL--TSGAPGA 171 (212)
Q Consensus 113 p~~~~~~~~~~~~~g~~~~l~C~~~~~--p~~~i~W~~~~--~~~---------------~~~~~~~~~~~--~~~~~~~ 171 (212)
+.+...+....+.+|+++.|.|.+.+. +.+.+.|++.. ... ......|+... ......+
T Consensus 7 ~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~ 86 (256)
T 3juy_B 7 QVQLVQSGAEVKKPGASVKVSCQASGYRFSHFTVHWVRQAPGQRFEWMGWINPYNGNKEFSAKFQDRVTFTADTSANTAY 86 (256)
T ss_dssp CCEEEECCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECTTTTTTEEEEEETTTTEEE
T ss_pred eEEEEecCCceecCCCeEEEEEEeecccccCceEEEEEECCCCCcEEEEEEEcCCCcEeecccCcceEEEEEecCCCEEE
Confidence 555666777889999999999999884 56799999732 110 01112455554 2233467
Q ss_pred EEEcCCCCCCCeeEEEEEEcc
Q psy2441 172 LQITNSIEEDQGKYECVAENE 192 (212)
Q Consensus 172 l~i~~~~~~d~g~y~C~a~n~ 192 (212)
|.|.+++.+|+|.|.|.+.|.
T Consensus 87 L~I~~v~~~DsG~Y~C~~~~~ 107 (256)
T 3juy_B 87 MELRSLRSADTAVYYCARVGE 107 (256)
T ss_dssp EEECSCCGGGCEEEEEEECCC
T ss_pred EEECCCCcccCEEEEEeEEec
Confidence 999999999999999999986
No 499
>1p4b_L Antibody variable light chain; FV antibody, antigen peptide binder, SCFV, picomolar binder, immune system; 2.35A {Mus musculus} SCOP: b.1.1.1 PDB: 1p4i_L
Probab=98.92 E-value=8.3e-09 Score=65.94 Aligned_cols=88 Identities=24% Similarity=0.263 Sum_probs=57.7
Q ss_pred ceeEecCCcEEEEEeeeeCC---CCceEEEeCCE---E--ec-------CCCCCceEEcCCCCceeEEEcCCCCCCCeeE
Q psy2441 121 TKVVEISHTTVLHCSASGNP---PPKISWIREML---P--VD-------TSRNPRYNLLTSGAPGALQITNSIEEDQGKY 185 (212)
Q Consensus 121 ~~~~~~g~~~~l~C~~~~~p---~~~i~W~~~~~---~--~~-------~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y 185 (212)
...+.+|+++.|.|.+...+ .+.+.|++... + +. .....|+..........|.|.+++.+|+|.|
T Consensus 14 ~v~v~~G~~vtL~C~~~~~~~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~Rf~~~~~~~~~sL~I~~v~~~DsG~Y 93 (135)
T 1p4b_L 14 ALTTSPGETVTLTCRSSTGAVTTSNYASWVQEKPDHLFTGLIGGTNNRAPGVPARFSGSLIGDKAALTITGAQTEDEAIY 93 (135)
T ss_dssp EEEECTTCEEEEEEEETTSSCCGGGCCEEEEEEGGGEEEEEEETTTEECTTCCTTEEEEEETTEEEEEEESCCGGGCEEE
T ss_pred cEEEcCCCCEEEEEEecCCCcCCCCEEEEEEECCCCCCEEEEEeCCccCCCCCCCEEEEcCCCEEEEEECCCChhHCEEE
Confidence 37789999999999997654 46899998421 1 10 0013455544333346899999999999999
Q ss_pred EEEEEcccccceecceEEEEecc
Q psy2441 186 ECVAENEVGTEYSPSTMLYVKGT 208 (212)
Q Consensus 186 ~C~a~n~~g~~~~~~~~l~v~~~ 208 (212)
.|.+.+...........|.|+..
T Consensus 94 ~C~~~~~~~~~fg~GT~L~V~~~ 116 (135)
T 1p4b_L 94 FCALWYSNHWVFGGGTKLTVLGG 116 (135)
T ss_dssp EEEEECSSCEEECCCEEEEEC--
T ss_pred EEEEecCCCCEECCCEEEEEEcC
Confidence 99998753222222256666543
No 500
>3r08_E T-cell surface glycoprotein CD3 epsilon chain; antibody, T-cell receptor, signalling, immune SY; 4.10A {Cricetulus migratorius}
Probab=98.91 E-value=4.5e-09 Score=60.60 Aligned_cols=58 Identities=16% Similarity=0.261 Sum_probs=46.1
Q ss_pred CCccEEeeCCeEEEEcccCCCCCCcEEEEeCCEEecCCCCCeeEEeec---CCCCeEEEeeeC
Q psy2441 36 PSTKVVEISHTTVLHCSASGNPPPKISWIREMLPVDTSRNPRYNLLTS---GAPGTYIKIKPN 95 (212)
Q Consensus 36 ~~~~~v~~g~~v~l~C~~~~~p~~~v~W~k~g~~l~~~~~~~~~~~~~---~~~g~~l~i~~~ 95 (212)
|....+..|++++|.|.+.+.|. |+|+|+|.+|.......+.|... +|.|.|.|.+..
T Consensus 6 p~~~v~~~G~~v~L~C~~~g~P~--i~W~kdg~~l~~~~~~~L~I~~v~~~~DsG~Y~C~A~t 66 (82)
T 3r08_E 6 IEYKVSISGTSVELTCPLDSDEN--LKWEKNGQELPQKHDKHLVLQDFSEVEDSGYYVCYTPA 66 (82)
T ss_dssp CCCEEEEETTEEEEECSSCCCSS--CEEEETTEECTTCCSSCCBCCSCCTTTTCSCEEEECSS
T ss_pred CceeEEEcCCeEEEEEECCCCCc--EEEEECCEECcCCCCCEEEECccCccCcCEEEEEEEcc
Confidence 45667889999999999999873 99999999997544455665552 589999998865
Done!