Query psy2442
Match_columns 111
No_of_seqs 102 out of 2146
Neff 12.0
Searched_HMMs 29240
Date Sat Aug 17 01:02:21 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy2442.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/2442hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3knb_B Obscurin-like protein 1 99.8 1.5E-19 5.1E-24 90.7 11.3 96 9-108 12-107 (107)
2 2cqv_A MLCK, myosin light chai 99.8 3.1E-18 1.1E-22 86.7 13.3 99 9-111 6-104 (114)
3 3knb_A Titin; IG-like, titin, 99.8 3.2E-18 1.1E-22 84.9 10.8 93 10-105 5-98 (100)
4 2kkq_A Myotilin; unknown funct 99.8 6.1E-18 2.1E-22 86.0 11.7 101 8-110 13-113 (116)
5 2dm2_A Palladin; beta-sandwich 99.8 3.4E-18 1.1E-22 86.0 10.5 102 8-111 6-107 (110)
6 3qp3_A Titin; I-SET IG-like, s 99.8 8.6E-18 3E-22 83.6 10.9 100 5-108 3-102 (103)
7 3kvq_A Vascular endothelial gr 99.8 3E-18 1E-22 85.9 8.5 101 4-110 4-104 (108)
8 2kdg_A Myotilin; immonoglobuli 99.8 2.2E-17 7.4E-22 81.7 10.9 96 9-107 4-99 (100)
9 2edj_A Roundabout homolog 2; K 99.8 3.9E-17 1.3E-21 80.8 11.4 95 8-108 6-100 (100)
10 1fhg_A Telokin; immunoglobulin 99.8 4E-17 1.4E-21 86.6 12.0 102 4-108 35-136 (154)
11 2dm3_A KIAA0992 protein, palla 99.8 7.4E-18 2.5E-22 84.7 8.3 100 9-111 8-107 (110)
12 1g1c_A Immunoglobulin-like dom 99.8 1E-16 3.5E-21 79.1 12.1 95 9-106 4-98 (99)
13 3irg_B Obscurin-like protein 1 99.8 6.3E-17 2.1E-21 80.9 11.0 98 7-108 10-107 (107)
14 1u2h_A APEG-1, aortic preferen 99.7 1.3E-16 4.4E-21 78.7 11.4 95 9-106 4-98 (99)
15 2e7c_A Myosin-binding protein 99.7 1.2E-16 4.2E-21 81.3 11.5 97 8-109 19-118 (118)
16 3puc_A Titin; I-SET IG-like do 99.7 2.9E-16 1E-20 77.4 12.0 93 9-105 5-97 (99)
17 1wit_A Twitchin 18TH IGSF modu 99.7 2E-16 6.8E-21 77.3 9.6 89 10-104 2-92 (93)
18 2eo9_A Roundabout homolog 1; b 99.7 1.3E-16 4.4E-21 81.2 8.5 94 9-108 7-100 (118)
19 2yr3_A Myosin light chain kina 99.7 1.8E-16 6.3E-21 78.2 7.7 93 5-104 6-98 (99)
20 3irg_A Titin; IG-like, titin, 99.7 1.3E-15 4.3E-20 75.1 10.8 93 10-105 5-98 (100)
21 1nct_A Titin; cell adhesion, g 99.7 3.6E-16 1.2E-20 78.2 8.8 93 9-105 13-105 (106)
22 2yuz_A Myosin-binding protein 99.7 1.3E-15 4.6E-20 75.4 10.6 93 10-110 7-99 (100)
23 3bfo_A Mucosa-associated lymph 99.7 2.5E-15 8.6E-20 73.1 11.0 84 10-105 3-86 (91)
24 2bk8_A Connectin, M1, titin he 99.7 8.9E-15 3.1E-19 71.9 13.0 89 14-106 5-94 (97)
25 1gxe_A Myosin binding protein 99.7 6.2E-16 2.1E-20 80.8 9.1 86 17-105 25-138 (139)
26 1wwb_X Protein (brain derived 99.7 2.8E-15 9.6E-20 74.6 10.1 97 7-109 1-101 (103)
27 2cr6_A KIAA1556 protein, obscu 99.7 7.8E-16 2.7E-20 78.0 8.1 101 2-109 4-105 (115)
28 2edf_A Obscurin; beta-sandwich 99.7 4.6E-15 1.6E-19 73.7 10.6 94 9-111 7-100 (103)
29 2e6p_A Obscurin-like protein 1 99.7 3.7E-15 1.3E-19 74.1 10.0 93 10-111 7-102 (104)
30 3m45_A Cell adhesion molecule 99.7 8.7E-15 3E-19 73.0 11.3 99 7-108 3-108 (108)
31 2ckn_A Basic fibroblast growth 99.7 2.5E-15 8.5E-20 73.7 9.0 86 10-104 9-94 (95)
32 3mtr_A N-CAM-1, NCAM-1, neural 99.6 1.5E-14 5E-19 80.2 12.7 98 10-111 19-117 (215)
33 1x44_A Myosin-binding protein 99.6 1.6E-14 5.4E-19 71.7 10.9 90 13-110 10-100 (103)
34 1waa_A Titin; metal binding pr 99.6 3.8E-14 1.3E-18 69.3 11.8 79 9-91 4-82 (93)
35 2yd1_A Tyrosine-protein phosph 99.6 1.9E-14 6.4E-19 79.6 11.9 101 3-109 96-203 (212)
36 2edh_A Obscurin; structural ge 99.6 4.7E-14 1.6E-18 71.1 12.3 97 3-109 11-108 (113)
37 2j8h_A Titin, connectin; cardi 99.6 4.3E-14 1.5E-18 77.1 12.7 96 9-106 3-98 (197)
38 2wv3_A Neuroplastin; igcam, me 99.6 2.4E-13 8.2E-18 73.9 15.6 100 3-105 85-189 (190)
39 2dku_A KIAA1556 protein; beta- 99.6 3.6E-14 1.2E-18 70.4 10.8 93 10-111 8-100 (103)
40 2iep_A Muscle-specific kinase 99.6 1.5E-14 5.1E-19 78.6 10.1 100 3-108 93-192 (192)
41 2dav_A SLOW MYBP-C, myosin-bin 99.6 2.4E-14 8.2E-19 73.4 10.1 98 12-111 9-117 (126)
42 2cr3_A Basic fibroblast growth 99.6 1.1E-14 3.8E-19 71.8 8.6 85 16-109 9-93 (99)
43 1wwc_A Protein (NT-3 growth fa 99.6 2.4E-14 8.4E-19 72.7 10.0 99 4-108 2-103 (118)
44 2yd6_A PTPRD protein; hydrolas 99.6 9.1E-14 3.1E-18 76.8 13.0 96 11-108 109-206 (212)
45 2lu7_A Obscurin-like protein 1 99.6 4.4E-14 1.5E-18 67.8 10.3 80 18-106 4-83 (84)
46 2yd1_A Tyrosine-protein phosph 99.6 5.1E-13 1.7E-17 73.8 15.9 99 9-107 5-103 (212)
47 3cx2_A Myosin-binding protein 99.6 4.8E-14 1.6E-18 70.6 10.7 94 10-105 4-107 (108)
48 2yuv_A Myosin-binding protein 99.6 1.2E-13 3.9E-18 68.3 11.8 92 9-109 6-98 (100)
49 2rik_A Titin; I-SET IG fold, p 99.6 6E-14 2.1E-18 80.4 12.2 99 3-105 185-283 (284)
50 3b5h_A Cervical EMMPRIN, HAB18 99.6 1.8E-13 6.3E-18 74.0 13.5 100 3-105 76-182 (184)
51 3b43_A Titin; I-SET IG fold, e 99.6 5.4E-14 1.9E-18 87.7 12.8 102 3-108 377-478 (570)
52 2v9t_A Roundabout homolog 1; s 99.6 2.8E-14 9.4E-19 72.3 9.5 97 7-107 6-110 (117)
53 2cry_A KIN of IRRE-like protei 99.6 3.1E-16 1.1E-20 80.2 1.9 102 3-107 7-114 (122)
54 2ens_A Advanced glycosylation 99.6 9.7E-15 3.3E-19 71.7 7.0 85 10-106 10-95 (96)
55 3caf_A Fibroblast growth facto 99.6 7.8E-15 2.7E-19 72.4 6.7 82 18-104 16-99 (100)
56 2eny_A Obscurin; beta-sandwich 99.6 1.4E-14 4.8E-19 72.2 7.7 92 11-110 9-101 (104)
57 3laf_A Deleted in colorectal c 99.6 3.3E-14 1.1E-18 84.9 10.6 99 3-108 305-403 (403)
58 3kld_A Contactin 4, axcam, BIG 99.6 3.9E-14 1.3E-18 84.6 10.8 95 3-105 288-382 (384)
59 1he7_A High affinity nerve gro 99.6 6.8E-14 2.3E-18 71.7 10.2 83 24-109 14-102 (126)
60 2cpc_A KIAA0657 protein; immun 99.6 3E-13 1E-17 68.1 12.4 95 6-109 6-103 (113)
61 2jll_A NCAM2, neural cell adhe 99.6 1.3E-13 4.5E-18 82.1 12.8 106 3-111 93-199 (389)
62 3b43_A Titin; I-SET IG fold, e 99.6 1.2E-13 4.3E-18 86.1 13.1 100 3-105 470-569 (570)
63 4hwu_A Fibroblast growth facto 99.6 5E-14 1.7E-18 68.9 9.2 84 16-109 7-90 (95)
64 2nzi_A Titin; IG-domain, FNIII 99.6 1.3E-13 4.4E-18 79.7 12.3 96 9-106 3-98 (305)
65 2r15_A Myomesin-1; sarcomeric 99.6 2.5E-13 8.5E-18 74.8 12.9 89 16-107 123-211 (212)
66 2dlt_A Myosin binding protein 99.6 6.4E-14 2.2E-18 69.9 9.4 80 9-92 7-86 (106)
67 3rbg_A Cytotoxic and regulator 99.6 3.7E-14 1.3E-18 72.7 8.7 91 16-109 7-104 (124)
68 2yd6_A PTPRD protein; hydrolas 99.6 2.3E-13 8E-18 75.2 12.3 96 8-106 4-100 (212)
69 2rik_A Titin; I-SET IG fold, p 99.6 5.2E-13 1.8E-17 76.5 13.9 97 8-108 3-99 (284)
70 4fqp_A Poliovirus receptor; im 99.6 5.2E-14 1.8E-18 81.8 9.9 95 4-108 210-306 (313)
71 2edk_A Myosin-binding protein 99.6 1.4E-14 4.9E-19 71.7 6.5 91 10-108 8-101 (101)
72 1z9m_A GAPA225; nectin-like, I 99.6 1E-13 3.5E-18 72.7 10.0 93 14-111 42-143 (145)
73 2iep_A Muscle-specific kinase 99.6 4.5E-14 1.5E-18 76.7 8.9 94 8-105 5-98 (192)
74 3p3y_A Neurofascin; IG domains 99.6 8E-14 2.7E-18 83.2 10.6 98 3-105 305-402 (404)
75 2a38_A Titin; Z1Z2, structural 99.6 2.3E-13 8E-18 74.0 11.6 97 4-104 94-193 (194)
76 3so5_A LIG-3, leucine-rich rep 99.6 3.8E-13 1.3E-17 67.2 11.6 96 7-104 7-111 (112)
77 2lvc_A Obscurin-like protein 1 99.6 6.9E-14 2.4E-18 68.1 8.4 78 10-91 4-83 (91)
78 3lcy_A Titin; A-BAND, IG tande 99.6 2.4E-13 8.1E-18 74.0 11.6 95 8-106 5-99 (197)
79 3qr2_A Basigin; CD147, EMMPRIN 99.6 4.6E-13 1.6E-17 69.6 12.1 87 7-94 18-115 (137)
80 3r4d_A CEA-related cell adhesi 99.6 1.8E-13 6.1E-18 75.2 11.0 98 4-109 103-203 (208)
81 2e7b_A Obscurin; IG-like domai 99.5 1.3E-13 4.4E-18 68.4 9.3 92 9-109 7-98 (103)
82 1epf_A NCAM, protein (neural c 99.5 3.6E-13 1.2E-17 73.1 11.5 87 3-94 93-180 (191)
83 2j8h_A Titin, connectin; cardi 99.5 1.8E-13 6E-18 74.7 10.2 98 4-105 93-196 (197)
84 2v44_A NCAM2, neural cell adhe 99.5 3.6E-13 1.2E-17 73.1 11.4 87 3-94 89-176 (189)
85 2k1m_A Myosin-binding protein 99.5 4E-13 1.4E-17 65.7 10.5 86 11-105 9-94 (95)
86 1cs6_A Axonin-1; neural cell a 99.5 2.7E-13 9.3E-18 80.6 11.6 95 3-105 287-381 (382)
87 2a38_A Titin; Z1Z2, structural 99.5 2.4E-13 8.2E-18 73.9 10.5 94 9-105 4-98 (194)
88 2wim_A N-CAM 2, NCAM2, neural 99.5 1.8E-13 6.2E-18 78.6 10.3 99 4-108 186-286 (291)
89 2v5m_A Dscam; neurobiology SPL 99.5 2.8E-13 9.7E-18 80.6 11.3 88 3-104 300-387 (388)
90 2nzi_A Titin; IG-domain, FNIII 99.5 7.2E-13 2.5E-17 76.6 12.7 105 3-111 92-202 (305)
91 1qz1_A Neural cell adhesion mo 99.5 4.4E-13 1.5E-17 77.0 11.6 98 4-106 188-290 (291)
92 2v5t_A NCAM2, N-CAM 2, neural 99.5 4.3E-13 1.5E-17 72.6 11.0 95 5-105 91-187 (189)
93 4fa8_A Secreted protein BARF1; 99.5 6.9E-14 2.3E-18 77.3 7.7 91 3-95 99-192 (203)
94 3k0w_A Mucosa-associated lymph 99.5 8.4E-13 2.9E-17 73.3 12.2 84 11-106 119-202 (218)
95 1epf_A NCAM, protein (neural c 99.5 1E-12 3.5E-17 71.3 12.3 97 11-108 3-101 (191)
96 2v9r_A Roundabout homolog 1; p 99.5 1.8E-13 6.1E-18 75.3 9.2 100 4-109 104-205 (212)
97 1bih_A Hemolin; insect immunit 99.5 4.2E-13 1.4E-17 80.0 11.3 93 3-104 301-394 (395)
98 2c5d_C AXL oncogene, tyrosine- 99.5 1.1E-12 3.8E-17 71.5 11.9 98 10-108 2-107 (195)
99 2edn_A Myosin-binding protein 99.5 2.6E-13 8.8E-18 68.9 8.7 94 12-107 14-117 (118)
100 3rbs_A Myomesin-1; immunoglobu 99.5 1.9E-13 6.5E-18 75.7 8.9 86 10-102 117-203 (207)
101 1rhf_A Tyrosine-protein kinase 99.5 3.9E-13 1.3E-17 72.5 9.9 96 11-108 3-99 (182)
102 3jz7_A MCAR, CAR, coxsackievir 99.5 5.9E-14 2E-18 77.3 6.7 99 3-107 114-213 (214)
103 3sgj_C Human FCG3A receptor; r 99.5 2.9E-13 9.8E-18 74.7 9.1 97 3-111 82-179 (204)
104 3mjg_X Beta-type platelet-deri 99.5 2.6E-12 8.9E-17 73.8 13.4 102 5-108 174-280 (289)
105 2e6q_A Obscurin-like protein 1 99.5 3.8E-12 1.3E-16 64.1 12.2 92 10-109 8-108 (112)
106 2y25_A Myomesin; structural pr 99.5 1.3E-12 4.5E-17 75.8 11.9 88 17-107 229-316 (317)
107 1pd6_A Cardiac MYBP-C;, myosin 99.5 1.1E-12 3.7E-17 65.3 10.0 79 9-90 14-93 (104)
108 1qz1_A Neural cell adhesion mo 99.5 2.4E-12 8.2E-17 73.9 12.8 98 10-108 2-101 (291)
109 3s35_X Vascular endothelial gr 99.5 8.6E-13 2.9E-17 67.2 9.7 91 16-108 14-112 (122)
110 1gl4_B Basement membrane-speci 99.5 9.2E-13 3.1E-17 64.7 9.4 79 17-104 17-96 (98)
111 2dm7_A KIAA1556 protein; beta- 99.5 1.5E-12 5E-17 65.0 10.1 90 9-108 7-96 (108)
112 3ejj_X Macrophage colony-stimu 99.5 1.3E-12 4.5E-17 74.9 11.1 102 3-107 175-282 (289)
113 2c5d_C AXL oncogene, tyrosine- 99.5 4.6E-12 1.6E-16 69.0 12.7 92 3-104 99-191 (195)
114 2o26_X MAST/stem cell growth f 99.5 1.1E-12 3.7E-17 75.5 10.6 103 3-108 177-290 (290)
115 3qs7_E FL cytokine receptor; i 99.5 3.2E-13 1.1E-17 81.8 8.7 101 3-111 317-419 (423)
116 1bih_A Hemolin; insect immunit 99.5 2.8E-13 9.6E-18 80.7 8.1 87 5-95 1-88 (395)
117 2va4_A NCAM2, N-CAM 2, neural 99.5 1.7E-12 5.8E-17 70.4 10.6 91 10-106 2-94 (192)
118 2jll_A NCAM2, neural cell adhe 99.5 3.9E-12 1.3E-16 75.7 12.9 95 10-108 1-101 (389)
119 1f2q_A High affinity immunoglo 99.5 3.4E-12 1.2E-16 68.7 11.6 95 3-109 79-174 (176)
120 2yd9_A Receptor-type tyrosine- 99.5 4E-12 1.4E-16 73.6 12.6 98 7-107 3-101 (304)
121 3lcy_A Titin; A-BAND, IG tande 99.5 3.5E-12 1.2E-16 69.4 11.7 99 4-106 94-196 (197)
122 1rhf_A Tyrosine-protein kinase 99.5 7E-12 2.4E-16 67.6 12.6 90 3-104 91-181 (182)
123 1f97_A Junction adhesion molec 99.5 1.5E-12 5.1E-17 71.6 9.7 100 3-106 97-207 (212)
124 2ifg_A High affinity nerve gro 99.5 6.6E-13 2.3E-17 78.4 8.7 85 21-108 257-347 (347)
125 3k0w_A Mucosa-associated lymph 99.4 4.8E-12 1.6E-16 70.3 11.2 87 9-107 17-103 (218)
126 3s97_C Contactin-1; carbonic a 99.4 4.1E-12 1.4E-16 69.3 10.6 88 10-105 113-200 (201)
127 2yd9_A Receptor-type tyrosine- 99.4 4.6E-12 1.6E-16 73.4 11.2 96 3-108 195-293 (304)
128 2ec8_A MAST/stem cell growth f 99.4 1.9E-12 6.6E-17 79.9 10.2 104 3-108 303-413 (524)
129 2v44_A NCAM2, neural cell adhe 99.4 2E-11 6.8E-16 66.1 13.1 91 14-108 6-97 (189)
130 3qs9_E FL cytokine receptor; i 99.4 1.4E-12 4.7E-17 81.0 9.4 98 3-108 317-416 (527)
131 1ugn_A LIR1, leukocyte immunog 99.4 7.9E-12 2.7E-16 68.4 11.4 100 3-105 91-197 (198)
132 2wv3_A Neuroplastin; igcam, me 99.4 1.2E-11 4.1E-16 67.2 11.9 89 9-108 2-93 (190)
133 2va4_A NCAM2, N-CAM 2, neural 99.4 1.5E-11 5.2E-16 66.6 12.4 98 3-104 88-191 (192)
134 3p2t_A Leukocyte immunoglobuli 99.4 1.1E-12 3.6E-17 71.8 7.7 93 9-107 4-97 (196)
135 2vr9_A Roundabout 1, ROBO; imm 99.4 3.1E-12 1E-16 70.8 9.6 87 4-95 101-196 (217)
136 2ny1_B T-cell surface glycopro 99.4 4.2E-12 1.5E-16 68.7 10.0 79 19-111 106-184 (184)
137 3grw_A Fibroblast growth facto 99.4 5.8E-12 2E-16 70.6 10.8 93 17-111 121-223 (241)
138 1fnl_A Low affinity immunoglob 99.4 4.1E-12 1.4E-16 68.3 9.8 92 3-106 82-174 (175)
139 3zyj_A Leucine-rich repeat-con 99.4 2.4E-12 8.1E-17 78.3 9.7 95 10-111 341-438 (440)
140 1vca_A VCAM-D1,2, human vascul 99.4 2.5E-11 8.6E-16 66.8 12.4 84 20-110 11-94 (202)
141 4fom_A Poliovirus receptor-rel 99.4 2.4E-13 8.2E-18 78.8 4.4 96 5-109 206-303 (308)
142 2ocw_A Polymeric-immunoglobuli 99.4 1.4E-11 5E-16 76.8 12.6 105 3-108 435-548 (585)
143 3uto_A Twitchin; kinase, muscl 99.4 1.8E-11 6.2E-16 76.7 13.0 91 10-104 482-572 (573)
144 3bp6_B Programmed cell death 1 99.4 1.1E-11 3.9E-16 67.8 10.8 92 16-109 8-106 (202)
145 3ojm_B Fibroblast growth facto 99.4 1.2E-11 4.2E-16 68.7 11.1 93 17-111 125-226 (231)
146 3laf_A Deleted in colorectal c 99.4 1.9E-11 6.6E-16 73.0 12.5 99 3-107 208-312 (403)
147 2ghw_B Anti-SARS SCFV antibody 99.4 3.1E-11 1E-15 68.1 12.6 92 12-105 137-241 (247)
148 2v5t_A NCAM2, N-CAM 2, neural 99.4 1.1E-11 3.6E-16 67.1 10.3 80 10-94 2-82 (189)
149 2x1w_L Vascular endothelial gr 99.4 1E-11 3.6E-16 68.7 10.5 104 4-109 96-210 (213)
150 3ojm_B Fibroblast growth facto 99.4 2.7E-12 9.3E-17 71.4 7.8 93 10-107 15-113 (231)
151 2eo1_A OBSCN protein, cDNA FLJ 99.4 9.2E-12 3.1E-16 61.5 8.8 81 19-108 20-100 (102)
152 3r06_A Anti-mouse CD3epsilon a 99.4 3E-11 1E-15 66.6 11.7 92 11-104 2-106 (213)
153 1nqb_A Single-chain antibody f 99.4 2.6E-11 8.9E-16 69.0 11.7 101 3-105 114-232 (256)
154 3nl4_L Antigen binding fragmen 99.4 5E-11 1.7E-15 65.7 12.3 81 11-93 2-95 (213)
155 3v2a_R Vascular endothelial gr 99.4 4.6E-14 1.6E-18 90.1 0.0 97 8-110 664-760 (772)
156 2vr9_A Roundabout 1, ROBO; imm 99.4 2.3E-11 7.8E-16 67.2 10.7 96 8-105 7-105 (217)
157 3u83_A Poliovirus receptor-rel 99.4 2.2E-12 7.5E-17 75.3 6.9 95 4-108 225-322 (331)
158 2d3v_A Leukocyte immunoglobuli 99.4 3.8E-12 1.3E-16 69.6 7.4 93 8-106 3-96 (196)
159 2gi7_A GPVI protein; IG-like d 99.4 1.4E-11 4.8E-16 66.8 9.5 86 6-106 4-90 (184)
160 3umt_A SCFV heavy chain and li 99.4 1.6E-11 5.4E-16 69.7 10.0 96 10-107 138-246 (256)
161 4i0k_A CD276 antigen; immunogl 99.4 1.5E-11 5.2E-16 68.2 9.6 94 11-108 112-208 (222)
162 1jhl_L IGG1-kappa D11.15 FV (l 99.4 4.3E-11 1.5E-15 59.7 10.3 78 13-92 4-94 (108)
163 1nbq_A JAM, junctional adhesio 99.4 7.5E-13 2.6E-17 72.6 4.2 97 4-104 101-207 (209)
164 3ry4_A Low affinity immunoglob 99.4 2.1E-11 7.1E-16 65.1 9.7 90 3-104 79-169 (170)
165 1f97_A Junction adhesion molec 99.3 2E-11 6.8E-16 67.1 9.7 93 12-110 3-107 (212)
166 3khq_A B-cell antigen receptor 99.3 3.5E-11 1.2E-15 62.4 10.0 94 11-108 18-119 (133)
167 1e07_A Carcinoembryonic antige 99.3 3.8E-11 1.3E-15 75.7 12.1 88 3-105 551-639 (642)
168 2wim_A N-CAM 2, NCAM2, neural 99.3 7.8E-11 2.7E-15 67.6 12.4 96 9-108 3-99 (291)
169 3sbw_C Programmed cell death 1 99.3 1.9E-11 6.5E-16 67.7 9.3 103 3-108 109-213 (222)
170 1itb_B Type 1 interleukin-1 re 99.3 6.9E-11 2.4E-15 68.6 12.0 94 9-104 207-312 (315)
171 4dkd_C Macrophage colony-stimu 99.3 1.1E-11 3.6E-16 71.3 8.5 103 3-108 175-283 (292)
172 4f80_A Butyrophilin subfamily 99.3 7.1E-12 2.4E-16 69.9 7.5 86 19-106 127-213 (226)
173 2y23_A Myomesin; structural pr 99.3 1.5E-11 5E-16 71.2 9.0 78 20-103 231-309 (312)
174 1gsm_A Madcam-1, mucosal addre 99.3 5.9E-11 2E-15 65.8 10.7 80 20-109 17-98 (210)
175 2id5_A Lingo-1, leucine rich r 99.3 1.1E-11 3.6E-16 76.0 8.4 83 17-105 392-476 (477)
176 3d9a_L Light chain of hyhel10 99.3 5.8E-11 2E-15 65.5 10.7 92 13-106 4-108 (213)
177 3sob_L Antibody light chain; b 99.3 1.5E-10 5.1E-15 64.7 12.4 93 11-105 25-130 (237)
178 3grw_A Fibroblast growth facto 99.3 1.9E-11 6.4E-16 68.5 8.6 84 18-106 23-108 (241)
179 1mqk_L Antibody 7E2 FV fragmen 99.3 3.4E-11 1.2E-15 61.3 8.8 77 13-91 4-93 (120)
180 1uct_A Immunoglobulin alpha FC 99.3 1.1E-11 3.6E-16 69.2 7.4 94 7-106 6-102 (218)
181 3oq3_B IFN-alpha/beta binding 99.3 4.1E-11 1.4E-15 70.2 10.2 96 7-108 125-226 (329)
182 3zyi_A Leucine-rich repeat-con 99.3 5.6E-12 1.9E-16 76.8 6.6 93 10-110 352-447 (452)
183 3uzq_A Anti-dengue MAB 4E11; d 99.3 5E-11 1.7E-15 67.5 10.0 96 10-107 133-245 (253)
184 3p3y_A Neurofascin; IG domains 99.3 1.6E-11 5.4E-16 73.3 8.3 100 6-109 12-117 (404)
185 1ry7_B FGFR-3, fibroblast grow 99.3 2.7E-11 9.2E-16 70.9 9.1 91 18-110 230-331 (334)
186 3q0h_A T cell immunoreceptor w 99.3 5.4E-11 1.8E-15 60.3 9.1 89 16-110 9-112 (117)
187 3oq3_B IFN-alpha/beta binding 99.3 1.5E-10 5.1E-15 67.8 12.1 99 3-104 218-328 (329)
188 3mj8_L Stimulatory hamster ant 99.3 1.3E-10 4.3E-15 64.1 11.1 90 13-105 4-108 (213)
189 2fbo_J V1V2;, variable region- 99.3 3.7E-11 1.3E-15 67.6 9.1 87 3-94 125-238 (250)
190 3sgj_C Human FCG3A receptor; r 99.3 5.3E-11 1.8E-15 65.6 9.5 82 9-106 6-88 (204)
191 2ec8_A MAST/stem cell growth f 99.3 1.3E-10 4.4E-15 71.8 11.9 104 3-108 200-311 (524)
192 3gkz_A Anti-methamphetamine si 99.3 7.9E-11 2.7E-15 66.8 10.1 95 11-107 142-250 (257)
193 1e07_A Carcinoembryonic antige 99.3 2.1E-10 7.3E-15 72.4 12.9 99 4-109 103-204 (642)
194 1pko_A Myelin oligodendrocyte 99.3 6.7E-10 2.3E-14 57.7 12.8 91 16-108 12-123 (139)
195 3qs7_E FL cytokine receptor; i 99.3 8.5E-11 2.9E-15 71.3 10.6 87 15-106 53-139 (423)
196 1f3r_B FV antibody fragment; I 99.3 3.8E-11 1.3E-15 68.2 8.4 76 15-92 144-232 (257)
197 2d3v_A Leukocyte immunoglobuli 99.3 1.1E-11 3.9E-16 67.7 6.0 88 3-93 90-180 (196)
198 3kld_A Contactin 4, axcam, BIG 99.3 6.8E-11 2.3E-15 70.6 9.6 82 17-106 212-294 (384)
199 2v5m_A Dscam; neurobiology SPL 99.3 6.4E-11 2.2E-15 70.5 9.5 94 10-108 3-104 (388)
200 3s96_B 3B5H10 FAB light chain; 99.3 2.1E-10 7E-15 63.4 10.9 79 12-93 3-99 (218)
201 1lk3_L 9D7 light chain; antige 99.3 2.4E-10 8.2E-15 63.0 11.2 88 17-106 7-107 (210)
202 3p2t_A Leukocyte immunoglobuli 99.3 4.9E-11 1.7E-15 65.2 8.3 97 4-104 91-194 (196)
203 1nbq_A JAM, junctional adhesio 99.3 3.9E-11 1.3E-15 65.7 7.9 95 10-110 4-110 (209)
204 2y25_A Myomesin; structural pr 99.3 8.4E-11 2.9E-15 68.2 9.7 87 8-101 5-92 (317)
205 1vca_A VCAM-D1,2, human vascul 99.3 7.3E-11 2.5E-15 65.0 8.9 106 3-110 84-201 (202)
206 1qok_A MFE-23 recombinant anti 99.3 2.4E-10 8.1E-15 65.8 11.3 91 12-105 164-267 (282)
207 4fa8_A Secreted protein BARF1; 99.3 1.7E-11 5.8E-16 67.7 6.3 86 19-107 2-106 (203)
208 2c1o_A IGK-C protein; FAB frag 99.3 1.8E-10 6E-15 65.2 10.6 83 9-93 37-137 (254)
209 3juy_B 3B3 single chain varian 99.3 2.6E-10 9E-15 64.7 11.3 82 10-93 149-244 (256)
210 1ugn_A LIR1, leukocyte immunog 99.3 1.2E-11 4.1E-16 67.7 5.5 92 9-106 4-97 (198)
211 2e27_L Anti-ciguatoxin antibod 99.3 1.6E-10 5.3E-15 58.8 9.3 78 12-91 5-95 (119)
212 1hng_A CD2; T lymphocyte adhes 99.3 5.9E-11 2E-15 64.1 8.1 86 20-110 6-103 (176)
213 3dmk_A DOWN syndrome cell adhe 99.3 6.1E-10 2.1E-14 72.0 13.9 97 9-108 428-528 (816)
214 3bkj_L WO2 IGG2A FAB fragment 99.3 2.9E-10 9.8E-15 64.4 11.1 82 10-93 34-133 (252)
215 2q20_A VK1 O18/O8 germline lig 99.3 1.5E-10 5.3E-15 57.8 8.9 78 12-91 5-95 (109)
216 1oll_A NK receptor; immune sys 99.2 6.2E-11 2.1E-15 64.5 8.0 91 10-106 4-95 (188)
217 2v9r_A Roundabout homolog 1; p 99.2 4.5E-11 1.6E-15 65.7 7.6 94 9-105 8-108 (212)
218 1uct_A Immunoglobulin alpha FC 99.2 1.1E-10 3.9E-15 65.0 9.1 96 4-107 97-199 (218)
219 3r4d_A CEA-related cell adhesi 99.2 2.6E-10 8.9E-15 62.5 10.5 87 19-110 8-112 (208)
220 3dmk_A DOWN syndrome cell adhe 99.2 1E-10 3.6E-15 75.5 10.1 88 3-104 336-423 (816)
221 1z7z_I Intercellular adhesion 99.2 1.1E-11 3.6E-16 75.3 5.2 87 3-106 361-449 (450)
222 1fnl_A Low affinity immunoglob 99.2 1.5E-10 5E-15 62.3 9.1 73 8-93 5-78 (175)
223 2oz4_A Intercellular adhesion 99.2 6.2E-12 2.1E-16 71.6 3.9 86 4-106 177-264 (265)
224 4ffy_L DENV1-E111 single chain 99.2 1.9E-10 6.5E-15 59.0 9.0 94 12-107 3-113 (126)
225 2xot_A Amphoterin-induced prot 99.2 2.5E-10 8.5E-15 67.9 10.3 82 17-106 253-337 (361)
226 2ocw_A Polymeric-immunoglobuli 99.2 2.9E-10 1E-14 71.0 11.1 103 3-107 105-222 (585)
227 3ejj_X Macrophage colony-stimu 99.2 3.9E-10 1.3E-14 64.7 10.7 97 3-105 81-180 (289)
228 3esu_F Antibody 14B7* light ch 99.2 5.7E-10 2E-14 62.9 11.3 80 12-93 6-98 (250)
229 3o4o_C Interleukin-1 receptor 99.2 3.4E-11 1.2E-15 70.6 6.5 93 9-108 17-119 (339)
230 1f2q_A High affinity immunoglo 99.2 6.9E-11 2.4E-15 63.6 7.2 74 8-94 2-76 (176)
231 3udw_C Poliovirus receptor; PV 99.2 2.9E-10 9.8E-15 57.2 9.1 90 17-108 7-118 (118)
232 1cs6_A Axonin-1; neural cell a 99.2 8.8E-11 3E-15 69.8 8.1 90 10-105 4-98 (382)
233 1p6f_A NKP46, natural cytotoxi 99.2 2E-10 6.8E-15 65.0 9.2 98 4-110 93-195 (242)
234 2qsq_A Carcinoembryonic antige 99.2 5.2E-10 1.8E-14 56.2 9.8 82 20-106 10-109 (111)
235 1eaj_A Coxsackie virus and ade 99.2 1E-10 3.5E-15 59.4 7.3 90 15-106 10-125 (126)
236 3nfj_J T cell receptor beta ch 99.2 9.5E-10 3.3E-14 61.9 12.0 77 13-90 4-95 (245)
237 1qfw_M FV, antibody (anti beta 99.2 2.1E-10 7.2E-15 57.2 8.3 77 13-91 4-93 (108)
238 1oll_A NK receptor; immune sys 99.2 2.4E-10 8.1E-15 62.1 9.1 93 4-105 90-187 (188)
239 3rjd_A High affinity immunoglo 99.2 4.7E-10 1.6E-14 63.4 10.6 72 10-94 1-73 (262)
240 2vsd_A CHIR AB1; immune system 99.2 1.9E-11 6.7E-16 60.8 4.4 89 9-105 4-95 (105)
241 1i8k_A Epidermal growth factor 99.2 2.7E-10 9.1E-15 56.8 8.4 77 13-91 4-93 (107)
242 3o4o_C Interleukin-1 receptor 99.2 1.6E-10 5.5E-15 67.8 8.7 83 20-106 130-220 (339)
243 4frw_A Poliovirus receptor-rel 99.2 1.6E-10 5.6E-15 63.4 8.2 84 17-103 125-208 (218)
244 3rjd_A High affinity immunoglo 99.2 3.8E-10 1.3E-14 63.8 9.8 92 3-107 76-168 (262)
245 3rbs_A Myomesin-1; immunoglobu 99.2 7.6E-10 2.6E-14 61.2 10.7 70 19-90 11-82 (207)
246 2znx_A SCFV; fluorotryptohpan, 99.2 3.1E-10 1.1E-14 63.9 9.3 92 13-106 4-108 (242)
247 3r08_E T-cell surface glycopro 99.2 1.9E-11 6.6E-16 58.1 3.6 60 17-90 6-66 (82)
248 2wng_A Tyrosine-protein phosph 99.2 4.3E-10 1.5E-14 65.7 10.1 98 12-110 5-119 (327)
249 1nkr_A P58-CL42 KIR; inhibitor 99.2 2.4E-10 8.2E-15 62.7 8.4 97 7-107 5-105 (201)
250 4dzb_B Vbeta2 (MAIT T cell rec 99.2 9.7E-10 3.3E-14 61.9 11.1 79 12-91 3-99 (246)
251 3vh8_G Killer cell immunoglobu 99.2 8.5E-11 2.9E-15 68.5 6.8 80 2-90 16-95 (316)
252 2yc1_B Single chain antibody f 99.2 1.5E-09 5.1E-14 57.1 10.8 79 11-91 17-108 (146)
253 1zox_A CLM-1; IG-superfamily, 99.2 1.7E-09 5.9E-14 54.2 10.7 91 16-108 7-112 (113)
254 1sy6_A T-cell surface glycopro 99.2 3.7E-11 1.3E-15 66.3 4.8 74 24-104 127-202 (204)
255 1i3g_L Antibody FV fragment; a 99.2 1.3E-09 4.6E-14 54.6 10.2 78 12-91 6-96 (111)
256 2ywz_A NEW antigen receptor va 99.2 8.2E-10 2.8E-14 55.4 9.4 77 13-90 3-87 (111)
257 1ry7_B FGFR-3, fibroblast grow 99.2 7E-11 2.4E-15 69.1 6.2 84 20-106 133-216 (334)
258 2gki_A Nuclease; anti-DNA anti 99.2 5.9E-10 2E-14 64.5 10.0 79 12-92 161-258 (291)
259 4dep_C Interleukin-1 receptor 99.2 4.9E-10 1.7E-14 65.9 9.8 97 3-106 109-217 (349)
260 3qs9_E FL cytokine receptor; i 99.2 4.5E-10 1.5E-14 69.9 9.7 98 3-108 222-325 (527)
261 3vh8_G Killer cell immunoglobu 99.2 1.1E-09 3.6E-14 63.8 10.8 99 4-106 110-215 (316)
262 1dr9_A B7-1 (CD80), T lymphocy 99.2 1.8E-09 6E-14 59.1 11.0 76 23-101 119-196 (201)
263 4hwn_A FC receptor-like A; FCR 99.2 2.4E-10 8.4E-15 57.1 6.9 86 9-106 7-99 (108)
264 2p1y_A Bispecific alpha/beta T 99.2 6.2E-10 2.1E-14 62.3 9.3 80 12-92 129-222 (238)
265 3bp6_B Programmed cell death 1 99.2 4.5E-10 1.5E-14 61.5 8.5 79 21-105 114-192 (202)
266 3mj8_L Stimulatory hamster ant 99.2 9.7E-11 3.3E-15 64.6 5.9 91 3-94 103-202 (213)
267 1xau_A B- and T-lymphocyte att 99.2 2.4E-09 8.1E-14 53.0 10.0 86 20-106 24-116 (122)
268 3moq_A NEW antigen receptor va 99.2 2.1E-09 7.1E-14 55.2 10.3 80 12-92 2-89 (126)
269 3kg5_A B-cell antigen receptor 99.1 5.1E-09 1.7E-13 54.3 11.8 95 12-109 20-122 (134)
270 2pet_A Lutheran blood group gl 99.1 6.2E-10 2.1E-14 61.9 9.0 88 3-91 108-211 (231)
271 3u6r_L Antibody 1:7 (light cha 99.1 9E-10 3.1E-14 57.7 9.0 77 13-91 3-92 (143)
272 3rrq_A Protein PD-1, programme 99.1 9.2E-10 3.1E-14 56.7 8.9 93 14-107 5-116 (129)
273 2o26_X MAST/stem cell growth f 99.1 6.5E-10 2.2E-14 63.9 9.2 96 3-105 84-182 (290)
274 1z7z_I Intercellular adhesion 99.1 4.6E-10 1.6E-14 68.1 8.9 85 3-93 78-166 (450)
275 3jz7_A MCAR, CAR, coxsackievir 99.1 4.1E-10 1.4E-14 61.8 8.0 92 17-110 7-124 (214)
276 2fbo_J V1V2;, variable region- 99.1 4.8E-10 1.6E-14 63.0 8.4 89 16-107 8-132 (250)
277 4dkd_C Macrophage colony-stimu 99.1 2.4E-10 8.1E-15 65.6 7.2 99 3-106 81-181 (292)
278 1ccz_A Protein (CD58); LFA-3, 99.1 2.7E-10 9.2E-15 61.3 7.0 84 20-111 5-99 (171)
279 3auv_A SC-DSFV derived from th 99.1 1.1E-09 3.7E-14 62.9 9.8 82 10-93 12-106 (276)
280 1jbj_A CD3 epsilon and gamma e 99.1 2.9E-10 9.8E-15 61.8 7.0 67 21-102 10-77 (186)
281 1wio_A CD4, T-cell surface gly 99.1 9.7E-10 3.3E-14 65.1 9.8 86 18-105 184-292 (363)
282 1q0x_L FAB 9B1, light chain; a 99.1 1.3E-09 4.5E-14 60.0 9.7 75 17-93 7-97 (212)
283 3tf7_C 42F3 MUT7 SCFV (42F3 al 99.1 2.3E-09 7.8E-14 60.9 10.8 82 10-93 137-234 (256)
284 3pv7_A B7-H6, IG-like domain-c 99.1 1.2E-09 4E-14 61.6 9.5 100 3-104 112-224 (248)
285 4ei6_B Vbeta16 XV19 type II na 99.1 4.7E-09 1.6E-13 59.0 11.9 78 11-90 3-97 (245)
286 1p6f_A NKP46, natural cytotoxi 99.1 6.1E-10 2.1E-14 63.0 8.2 93 8-106 5-98 (242)
287 1moe_A Anti-CEA MAB T84.66; an 99.1 1.5E-09 5.1E-14 60.8 9.8 92 13-106 4-112 (240)
288 2ifg_A High affinity nerve gro 99.1 3.1E-11 1.1E-15 71.3 3.0 91 8-104 156-247 (347)
289 4f80_A Butyrophilin subfamily 99.1 8.1E-09 2.8E-13 57.4 12.7 86 18-105 12-118 (226)
290 2gi7_A GPVI protein; IG-like d 99.1 6.1E-10 2.1E-14 60.3 7.9 80 4-92 85-167 (184)
291 1eeq_A Kappa-4 immunoglobulin 99.1 1.3E-09 4.3E-14 54.9 8.3 77 13-91 4-99 (114)
292 3d9a_L Light chain of hyhel10 99.1 3.4E-10 1.2E-14 62.4 6.7 90 4-94 103-202 (213)
293 2wng_A Tyrosine-protein phosph 99.1 2.7E-10 9.3E-15 66.6 6.6 91 7-102 219-316 (327)
294 2if7_A SLAM family member 6; N 99.1 3.9E-10 1.3E-14 61.6 6.8 86 17-108 5-108 (193)
295 3tv3_L PGT128 light chain, IG 99.1 1.3E-09 4.6E-14 59.9 9.0 83 19-105 9-105 (211)
296 4gos_A V-SET domain-containing 99.1 1.5E-09 5.2E-14 55.6 8.6 88 15-104 10-118 (125)
297 2edo_A CD48 antigen; beta-sand 99.1 2.9E-10 9.9E-15 57.9 5.9 89 19-111 13-115 (121)
298 1h5b_A Murine T cell receptor 99.1 9.9E-10 3.4E-14 55.2 7.7 79 13-93 4-95 (113)
299 3sbw_C Programmed cell death 1 99.1 2.5E-09 8.5E-14 59.2 10.0 91 17-110 8-119 (222)
300 2rcj_C Light chain; immunoglob 99.1 2.5E-09 8.5E-14 66.1 10.9 90 3-94 103-203 (523)
301 3ry4_A Low affinity immunoglob 99.1 1.5E-09 5.2E-14 57.8 8.8 80 11-106 5-85 (170)
302 2d9c_A Signal-regulatory prote 99.1 6.1E-09 2.1E-13 53.9 10.8 99 12-111 10-126 (136)
303 4dep_C Interleukin-1 receptor 99.1 2.2E-11 7.6E-16 71.7 1.6 95 10-106 224-333 (349)
304 2gjj_A A21 single-chain antibo 99.1 1.6E-09 5.5E-14 61.9 9.3 95 11-107 6-119 (264)
305 1j05_L T84.66 antibody, anti-C 99.1 8.5E-10 2.9E-14 55.3 7.2 77 13-91 4-97 (111)
306 2coq_A NEW antigen receptor va 99.1 2.1E-09 7.1E-14 53.6 8.6 77 13-90 3-87 (108)
307 2zg1_A Sialic acid-binding IG- 99.1 1.8E-09 6.2E-14 59.5 9.1 63 22-93 135-201 (214)
308 1svz_A Immunoglobulin;, single 99.1 1.4E-09 4.7E-14 61.4 8.7 79 13-93 4-100 (247)
309 3auv_A SC-DSFV derived from th 99.1 2.8E-09 9.7E-14 61.1 10.0 75 16-91 140-235 (276)
310 3omz_A Human vdelta1 gamma del 99.1 8.6E-10 2.9E-14 62.7 7.8 82 11-93 3-103 (259)
311 1dlf_L Anti-dansyl immunoglobu 99.1 7.8E-09 2.7E-13 51.9 10.5 77 13-91 4-98 (113)
312 3fku_X Neutralizing antibody F 99.1 1.1E-09 3.6E-14 63.1 8.2 80 10-92 140-234 (280)
313 1lk3_L 9D7 light chain; antige 99.1 1.3E-09 4.3E-14 60.1 8.1 89 4-93 102-200 (210)
314 3q5y_A TCR N15 beta; IG, T cel 99.1 1.4E-08 4.6E-13 57.0 12.3 76 12-89 4-95 (240)
315 3pv7_A B7-H6, IG-like domain-c 99.1 6.4E-10 2.2E-14 62.7 6.9 90 17-108 10-120 (248)
316 2p1y_A Bispecific alpha/beta T 99.1 4.3E-09 1.5E-13 58.9 10.0 79 13-93 3-97 (238)
317 1sq2_N Novel antigen receptor; 99.1 3.5E-09 1.2E-13 53.2 8.7 77 13-90 3-87 (113)
318 3o3u_N Maltose-binding peripla 99.1 6.2E-10 2.1E-14 69.6 7.0 88 19-111 375-474 (581)
319 2pet_A Lutheran blood group gl 99.1 5.1E-10 1.8E-14 62.2 6.1 89 16-110 6-118 (231)
320 3tv3_L PGT128 light chain, IG 99.1 4.1E-10 1.4E-14 62.0 5.6 91 3-94 100-200 (211)
321 1qgc_4 Protein (immunoglobulin 99.1 2.3E-09 8E-14 64.8 9.3 91 13-105 4-111 (438)
322 1pew_A JTO2, A lambda-6 type i 99.1 5.3E-09 1.8E-13 52.2 9.2 74 17-91 7-94 (109)
323 2y23_A Myomesin; structural pr 99.1 5.6E-09 1.9E-13 60.4 10.6 72 19-92 116-189 (312)
324 1hnf_A CD2; T lymphocyte adhes 99.1 1.4E-09 4.9E-14 59.1 7.6 88 18-110 7-108 (182)
325 2zg1_A Sialic acid-binding IG- 99.1 6.1E-09 2.1E-13 57.3 10.2 94 15-109 5-125 (214)
326 1jbj_A CD3 epsilon and gamma e 99.0 4.4E-10 1.5E-14 61.1 5.4 60 22-94 119-178 (186)
327 1x9q_A SCFV, 4M5.3 anti-fluore 99.0 1.9E-09 6.5E-14 61.6 8.2 83 9-93 14-114 (268)
328 2r15_A Myomesin-1; sarcomeric 99.0 3.3E-09 1.1E-13 58.2 8.9 75 24-102 16-91 (212)
329 2q87_A CMRF35-H antigen; all-b 99.0 2.5E-09 8.5E-14 53.4 7.7 74 18-92 4-91 (110)
330 2v5y_A Receptor-type tyrosine- 99.0 1.8E-09 6.1E-14 69.3 8.8 98 9-110 164-264 (731)
331 1xt5_A Variable region-contain 99.0 5.7E-09 1.9E-13 53.8 9.2 89 15-106 9-133 (135)
332 1wio_A CD4, T-cell surface gly 99.0 7.5E-10 2.6E-14 65.6 6.6 75 20-108 106-180 (363)
333 2xzc_L FAB A.17 light chain; i 99.0 4.6E-09 1.6E-13 58.0 9.3 75 17-93 7-96 (216)
334 4gjt_B Poliovirus receptor-rel 99.0 1.1E-08 3.8E-13 52.1 10.0 90 15-106 5-117 (123)
335 2if7_A SLAM family member 6; N 99.0 1.1E-08 3.6E-13 55.9 10.5 64 23-100 121-186 (193)
336 3bqu_C 3H6 FAB light chain; be 99.0 1.6E-10 5.6E-15 64.5 3.3 82 10-93 23-117 (233)
337 2jju_A Signal regulatory prote 99.0 6.9E-09 2.4E-13 53.2 9.0 77 14-91 7-96 (127)
338 1oaq_L Light chain; antibody, 99.0 6.7E-09 2.3E-13 52.7 8.9 90 14-106 5-110 (120)
339 1neu_A Myelin P0 protein; stru 99.0 7.4E-09 2.5E-13 52.6 9.1 93 16-109 5-122 (124)
340 1nko_A Sialic acid binding IG- 99.0 5E-09 1.7E-13 53.9 8.5 97 14-111 10-132 (132)
341 3u83_A Poliovirus receptor-rel 99.0 9.6E-09 3.3E-13 60.0 10.7 96 3-106 123-230 (331)
342 1b6u_A KIR2DL3, P58 killer cel 99.0 8.1E-09 2.8E-13 58.9 9.8 96 8-107 5-104 (257)
343 3mj6_A Junctional adhesion mol 99.0 2.3E-09 8E-14 60.9 7.6 88 17-106 125-237 (268)
344 3pl6_D MBP peptide / T-cell re 99.0 1.5E-08 5E-13 57.8 10.8 78 12-91 28-122 (268)
345 3r8b_B G5-8, enterotoxin type 99.0 4.8E-08 1.6E-12 49.9 11.6 79 12-91 7-101 (125)
346 2xzc_L FAB A.17 light chain; i 99.0 4.3E-09 1.5E-13 58.2 8.3 90 4-94 105-204 (216)
347 3eow_R Poliovirus receptor; im 99.0 1.3E-09 4.6E-14 60.4 6.2 101 3-110 109-214 (221)
348 3mjg_X Beta-type platelet-deri 99.0 1.9E-09 6.5E-14 61.9 7.0 71 16-94 6-76 (289)
349 1n26_A IL-6 receptor alpha cha 99.0 1.9E-09 6.6E-14 63.2 7.1 87 15-111 11-98 (325)
350 3s96_B 3B5H10 FAB light chain; 99.0 1.7E-09 5.9E-14 59.7 6.5 91 3-94 110-209 (218)
351 2nms_A CMRF35-like-molecule 1; 99.0 4.1E-08 1.4E-12 50.2 11.1 94 16-111 8-116 (124)
352 3mj6_A Junctional adhesion mol 99.0 4E-09 1.4E-13 59.9 8.0 93 11-104 6-120 (268)
353 1hxm_B Gamma-delta T-cell rece 99.0 2E-08 7E-13 56.5 10.8 79 12-91 3-102 (242)
354 2ptt_A CD48 antigen; CD244, CD 99.0 8.6E-09 2.9E-13 51.4 8.3 83 18-106 11-108 (110)
355 3juy_B 3B3 single chain varian 99.0 2.1E-08 7.2E-13 56.8 10.8 81 10-91 6-107 (256)
356 1hng_A CD2; T lymphocyte adhes 99.0 6.6E-10 2.2E-14 59.9 4.4 57 25-95 110-166 (176)
357 2x1w_L Vascular endothelial gr 99.0 3.6E-09 1.2E-13 58.5 7.5 81 17-104 14-99 (213)
358 3bik_B Programmed cell death p 99.0 3.7E-08 1.3E-12 51.0 10.8 79 13-92 12-106 (134)
359 2wbj_D OB TCR; transmembrane, 99.0 8.8E-09 3E-13 59.2 9.3 80 11-91 25-122 (279)
360 1dr9_A B7-1 (CD80), T lymphocy 99.0 3.7E-09 1.2E-13 57.8 7.4 87 20-109 4-109 (201)
361 4fmk_A Poliovirus receptor-rel 99.0 1.2E-08 4.2E-13 56.1 9.6 86 19-105 10-119 (225)
362 3tf7_C 42F3 MUT7 SCFV (42F3 al 99.0 7.5E-09 2.6E-13 58.7 8.8 81 12-93 5-100 (256)
363 2or8_A Hepatitis A virus cellu 99.0 6E-09 2E-13 52.4 7.4 89 17-106 4-111 (116)
364 2rcj_C Light chain; immunoglob 99.0 1.3E-08 4.3E-13 63.0 10.2 76 16-93 6-94 (523)
365 2znx_A SCFV; fluorotryptohpan, 99.0 1.5E-08 5E-13 57.1 9.6 71 20-91 132-222 (242)
366 3s97_C Contactin-1; carbonic a 99.0 2.5E-09 8.5E-14 58.2 6.2 75 16-94 14-91 (201)
367 3r0n_A Poliovirus receptor-rel 99.0 1.1E-08 3.9E-13 52.2 8.3 85 16-102 8-126 (128)
368 1itb_B Type 1 interleukin-1 re 99.0 8.6E-09 3E-13 59.8 8.7 69 20-94 113-188 (315)
369 3nl4_L Antigen binding fragmen 99.0 4.7E-09 1.6E-13 57.8 7.3 85 4-89 105-198 (213)
370 1q0x_L FAB 9B1, light chain; a 99.0 7.8E-09 2.7E-13 56.9 8.1 84 9-93 114-203 (212)
371 2d9q_B Granulocyte colony-stim 99.0 4.1E-09 1.4E-13 61.5 7.3 89 18-111 8-102 (313)
372 2atp_B T-cell surface glycopro 98.9 3.2E-08 1.1E-12 49.7 9.6 75 15-90 3-100 (115)
373 1mju_H Immunoglobulin MS6-12; 98.9 1.5E-08 5.1E-13 56.6 9.1 74 17-91 7-101 (227)
374 2dru_A Chimera of CD48 antigen 98.9 1.7E-08 6E-13 54.6 9.1 88 18-111 7-109 (180)
375 1i1r_A GP130, interleukin-6 re 98.9 5E-08 1.7E-12 56.6 11.6 90 16-111 10-107 (303)
376 1nfd_E H57 FAB; complex (immun 98.9 5.3E-10 1.8E-14 61.6 3.1 85 9-94 112-201 (212)
377 1b6u_A KIR2DL3, P58 killer cel 98.9 8E-09 2.7E-13 59.0 8.0 99 4-108 98-203 (257)
378 1nfd_E H57 FAB; complex (immun 98.9 4E-09 1.4E-13 58.1 6.6 72 17-90 6-90 (212)
379 1fo0_A Protein (BM3.3 T cell r 98.9 6.9E-09 2.4E-13 52.3 6.9 76 14-90 4-95 (116)
380 1p4b_L Antibody variable light 98.9 2.6E-08 9E-13 51.6 9.2 76 13-91 9-100 (135)
381 1nkr_A P58-CL42 KIR; inhibitor 98.9 1.7E-08 5.7E-13 55.3 8.9 82 4-91 99-183 (201)
382 3sob_L Antibody light chain; b 98.9 1.4E-08 4.7E-13 56.7 8.7 85 9-94 134-225 (237)
383 2c1o_A IGK-C protein; FAB frag 98.9 9.1E-09 3.1E-13 58.1 7.9 90 4-94 145-244 (254)
384 1fo0_B Protein (BM3.3 T cell r 98.9 2.9E-08 9.9E-13 49.8 9.0 76 13-91 4-96 (112)
385 2z35_A T-cell receptor alpha-c 98.9 1.4E-08 4.7E-13 50.9 7.7 75 14-89 4-92 (112)
386 3t0v_A Immunoglobulin variable 98.9 1.2E-07 4.2E-12 48.3 11.3 79 11-92 2-95 (123)
387 1tvd_A T cell receptor, ES204 98.9 9.3E-09 3.2E-13 51.8 7.1 77 14-91 4-98 (116)
388 2i24_N NEW antigen receptor PB 98.9 2.2E-08 7.4E-13 51.0 8.4 77 13-90 3-87 (121)
389 3r06_A Anti-mouse CD3epsilon a 98.9 1.8E-08 6.3E-13 55.4 8.7 89 4-93 103-201 (213)
390 1svz_A Immunoglobulin;, single 98.9 1.4E-08 4.9E-13 57.2 8.4 72 19-91 136-228 (247)
391 2oi9_C V beta, T cell receptor 98.9 8.2E-08 2.8E-12 48.8 10.4 77 13-91 4-96 (121)
392 1q9r_B S25-2 FAB (IGG1K) heavy 98.9 4.9E-09 1.7E-13 58.2 6.3 87 4-94 117-212 (222)
393 2aw2_A B and T lymphocyte atte 98.9 9.5E-08 3.2E-12 46.9 9.9 82 20-105 21-109 (120)
394 1ncn_A T lymphocyte activation 98.9 4E-08 1.4E-12 48.9 9.1 71 20-94 4-94 (110)
395 1moe_A Anti-CEA MAB T84.66; an 98.9 2.9E-08 9.8E-13 55.6 9.4 87 3-90 106-219 (240)
396 3ux9_B SCFV antibody; five hel 98.9 3.7E-08 1.3E-12 55.7 9.9 72 19-91 143-235 (256)
397 1mju_H Immunoglobulin MS6-12; 98.9 6.2E-09 2.1E-13 58.2 6.6 103 4-110 111-221 (227)
398 1u3h_A T-cell receptor alpha-c 98.4 1.5E-10 5.1E-15 58.0 0.0 76 15-91 4-93 (110)
399 3omz_A Human vdelta1 gamma del 98.9 2E-08 6.8E-13 57.0 8.7 79 11-90 137-230 (259)
400 1qok_A MFE-23 recombinant anti 98.9 5E-08 1.7E-12 56.2 10.5 79 14-93 30-129 (282)
401 2j6e_L IGM, FAB light chain; a 98.9 1E-08 3.5E-13 57.2 7.4 75 17-93 26-115 (234)
402 3ux9_B SCFV antibody; five hel 98.9 3.5E-08 1.2E-12 55.9 9.7 74 18-93 10-98 (256)
403 1za6_B IGG heavy chain; immuno 98.9 2.9E-08 9.9E-13 58.5 9.6 87 17-105 7-114 (344)
404 2fbj_H IGA-kappa J539 FAB (hea 98.9 3.1E-08 1.1E-12 55.0 9.3 90 4-96 113-212 (220)
405 2qhl_A Novel immune-type recep 98.9 8.4E-09 2.9E-13 51.6 6.3 74 16-91 5-98 (111)
406 4frw_A Poliovirus receptor-rel 98.9 4.4E-08 1.5E-12 53.6 9.8 88 16-104 5-114 (218)
407 3esu_F Antibody 14B7* light ch 98.9 1.4E-08 4.6E-13 57.3 7.9 75 15-90 136-231 (250)
408 2oz4_A Intercellular adhesion 98.9 5.1E-08 1.8E-12 55.4 10.3 78 21-108 14-99 (265)
409 1c1e_H Catalytic antibody 1E9 98.9 4.5E-08 1.5E-12 54.2 9.8 75 17-92 7-102 (219)
410 2oyp_A Hepatitis A virus cellu 98.9 8.9E-09 3E-13 51.1 6.4 84 20-105 4-107 (109)
411 2ghw_B Anti-SARS SCFV antibody 98.9 3.4E-08 1.2E-12 55.6 9.3 73 18-91 10-103 (247)
412 3nl4_H Antigen binding fragmen 98.9 7.8E-08 2.7E-12 53.1 10.6 75 17-93 6-99 (215)
413 3bj9_1 Immunoglobulin IOTA cha 98.9 7E-08 2.4E-12 48.5 9.6 72 19-91 7-99 (116)
414 3kgr_A LAIR-1, hlair1, leukocy 98.9 2.2E-08 7.5E-13 49.8 7.6 97 7-106 6-103 (106)
415 1op3_H FAB 2G12, heavy chain; 98.9 1.2E-07 4.3E-12 52.7 11.4 75 18-93 8-103 (225)
416 1bec_A 14.3.D T cell antigen r 98.9 9.8E-08 3.3E-12 53.6 11.1 76 14-91 3-94 (238)
417 1nez_G T-cell surface glycopro 98.9 3.9E-08 1.3E-12 50.5 8.6 80 9-90 3-106 (128)
418 3bp6_A Programmed cell death p 98.9 5.3E-08 1.8E-12 49.2 9.0 78 14-92 3-96 (117)
419 3b5h_A Cervical EMMPRIN, HAB18 98.9 4.2E-08 1.4E-12 52.8 9.1 75 20-108 8-84 (184)
420 3qib_D 2B4 beta chain; IG doma 98.9 1E-07 3.6E-12 54.4 11.1 79 11-91 28-123 (270)
421 3dmm_D T-cell surface glycopro 98.9 7E-08 2.4E-12 50.9 9.6 80 11-91 2-104 (150)
422 2otu_A FV light chain variable 98.9 8E-08 2.7E-12 48.3 9.5 74 17-92 8-99 (115)
423 1f3r_B FV antibody fragment; I 98.9 3.1E-08 1.1E-12 56.2 8.8 75 18-93 8-102 (257)
424 2gjj_A A21 single-chain antibo 98.9 4.9E-08 1.7E-12 55.7 9.6 71 20-91 148-239 (264)
425 2fbj_H IGA-kappa J539 FAB (hea 98.9 1.5E-07 5.2E-12 52.2 11.4 75 18-93 8-103 (220)
426 1c1e_H Catalytic antibody 1E9 98.9 8.9E-09 3E-13 57.0 6.3 89 4-94 114-209 (219)
427 1nqb_A Single-chain antibody f 98.9 7.1E-08 2.4E-12 54.8 10.1 77 16-93 6-103 (256)
428 4fqp_A Poliovirus receptor; im 98.9 4.7E-08 1.6E-12 56.8 9.5 94 14-108 4-118 (313)
429 1hkf_A NKP44, NK cell activati 98.9 2E-07 6.8E-12 47.5 10.7 77 15-92 15-107 (122)
430 4fom_A Poliovirus receptor-rel 98.9 2.7E-08 9.3E-13 57.6 8.3 88 19-107 8-112 (308)
431 3uzq_A Anti-dengue MAB 4E11; d 98.8 6.5E-08 2.2E-12 54.7 9.6 90 15-105 6-116 (253)
432 2yz1_A Tyrosine-protein phosph 98.8 2.8E-08 9.6E-13 50.3 7.3 80 12-92 9-101 (120)
433 1x9q_A SCFV, 4M5.3 anti-fluore 98.8 7.9E-08 2.7E-12 54.9 9.7 74 17-91 158-254 (268)
434 1qgc_4 Protein (immunoglobulin 98.8 6.9E-08 2.4E-12 58.4 9.8 75 16-91 224-319 (438)
435 1q9r_B S25-2 FAB (IGG1K) heavy 98.8 1.2E-07 4.3E-12 52.5 10.2 74 18-92 8-104 (222)
436 3dmm_C T-cell surface glycopro 98.8 1.3E-07 4.4E-12 50.7 9.7 82 9-91 8-112 (166)
437 2h32_A Immunoglobulin IOTA cha 98.8 2.9E-08 9.8E-13 50.9 6.9 77 17-94 7-104 (126)
438 2or7_A T-cell immunoglobulin a 98.8 2.8E-08 9.4E-13 50.0 6.8 89 17-107 4-111 (115)
439 4esk_A LAIR-1, mlair1, leukocy 98.8 1.5E-07 5E-12 46.5 9.2 87 10-105 9-100 (102)
440 2j6e_L IGM, FAB light chain; a 98.8 3.4E-09 1.2E-13 59.2 3.6 71 23-94 148-224 (234)
441 3noi_A Natural cytotoxicity tr 98.8 2.2E-08 7.4E-13 50.8 6.2 75 16-91 13-103 (120)
442 2hp4_A T-cell surface glycopro 98.8 7.9E-08 2.7E-12 48.3 8.0 77 13-91 3-99 (114)
443 3bkj_L WO2 IGG2A FAB fragment 98.8 2E-08 6.7E-13 56.8 6.4 90 4-94 141-240 (252)
444 1ypz_F T-cell receptor gamma c 98.8 1.9E-07 6.5E-12 52.3 10.3 77 14-91 5-101 (230)
445 3rgv_A YAE62 TCR A chain; TCR, 98.8 1.8E-07 6.1E-12 51.6 9.9 77 13-90 3-93 (200)
446 2ol3_A BM3.3 T-cell receptor a 98.8 4.5E-08 1.5E-12 51.2 7.3 75 15-90 5-95 (142)
447 3eow_R Poliovirus receptor; im 98.8 7E-09 2.4E-13 57.5 4.4 90 17-108 6-117 (221)
448 1c5d_H Monoclonal antibody aga 98.8 1.1E-07 3.8E-12 52.6 9.1 75 17-92 7-101 (215)
449 3v2a_R Vascular endothelial gr 98.8 1.9E-07 6.5E-12 60.1 11.4 88 18-108 232-328 (772)
450 1pz5_B Heavy chain of FAB (SYA 98.8 2.4E-08 8.3E-13 55.3 6.4 89 3-100 114-215 (220)
451 2rgs_A I, IG gamma-2B heavy ch 98.8 7.5E-09 2.6E-13 57.5 4.3 84 9-94 8-101 (218)
452 3bqu_C 3H6 FAB light chain; be 98.8 8E-09 2.7E-13 57.6 4.3 83 10-93 134-223 (233)
453 4i0k_A CD276 antigen; immunogl 98.8 3.8E-09 1.3E-13 58.5 2.8 72 19-91 4-94 (222)
454 3gkz_A Anti-methamphetamine si 98.8 2.1E-07 7.2E-12 52.7 10.0 76 15-91 13-108 (257)
455 3bae_H WO2 IGG2A FAB fragment 98.8 1.1E-07 3.8E-12 53.0 8.7 76 17-93 7-104 (228)
456 3to4_D NKT vbeta2 (mouse varia 98.8 2.3E-07 7.8E-12 52.6 10.1 76 14-92 5-97 (253)
457 1dee_B IGM RF 2A2; FAB-IBP com 98.8 3E-07 1E-11 51.1 10.2 74 18-92 8-102 (223)
458 3d9a_H Heavy chain of hyhel10 98.7 3.6E-08 1.2E-12 54.3 6.3 88 4-94 108-203 (210)
459 1dn0_B IGM-kappa cold agglutin 98.7 2.1E-07 7E-12 52.2 9.5 73 17-90 7-99 (232)
460 3d9a_H Heavy chain of hyhel10 98.7 8.7E-08 3E-12 52.7 7.8 75 17-92 7-101 (210)
461 3liz_H 4C3 monoclonal antibody 98.7 4.1E-08 1.4E-12 55.7 6.6 83 4-94 114-209 (253)
462 4ety_A LAIR-1, mlair1, leukocy 98.7 2.7E-07 9.2E-12 46.8 8.9 88 10-106 9-101 (118)
463 2eys_A NKT15; natural killer T 98.7 8.1E-07 2.8E-11 49.3 11.6 77 13-90 6-96 (210)
464 4dzb_B Vbeta2 (MAIT T cell rec 98.7 6.1E-08 2.1E-12 54.5 7.2 82 10-93 124-219 (246)
465 2ny1_B T-cell surface glycopro 98.7 5.9E-09 2E-13 56.2 2.9 72 20-92 5-91 (184)
466 1pz5_B Heavy chain of FAB (SYA 98.7 3.4E-07 1.2E-11 50.6 10.0 75 17-92 7-104 (220)
467 1lp9_E T-cell receptor alpha c 98.7 2.2E-07 7.7E-12 50.9 9.0 77 13-90 4-94 (194)
468 3bn9_D E2 FAB heavy chain; ant 98.7 1.6E-07 5.5E-12 53.6 8.7 75 18-93 8-103 (257)
469 2vol_A Murine IGG FC; FC, zinc 98.7 4.6E-08 1.6E-12 53.9 6.2 85 7-93 106-196 (207)
470 1ypz_E T cell receptor delta, 98.7 1.5E-07 5.2E-12 51.9 8.3 77 13-91 4-93 (207)
471 3m8o_H Immunoglobulin A1 heavy 98.7 4.3E-07 1.5E-11 50.3 10.1 74 17-91 7-103 (221)
472 1hxm_A Gamma-delta T-cell rece 98.7 5.2E-07 1.8E-11 50.7 10.4 78 13-91 4-97 (229)
473 2xqy_G A13-D6.3 monoclonal ant 98.7 2E-07 7E-12 53.2 8.8 76 16-92 12-108 (261)
474 2q86_A Valpha14 TCR; INKT cell 98.7 2.8E-07 9.5E-12 51.8 9.2 77 13-90 4-94 (229)
475 2vol_A Murine IGG FC; FC, zinc 98.7 2.2E-08 7.4E-13 55.2 4.5 79 15-94 7-93 (207)
476 1u9k_A Triggering receptor exp 98.7 1.1E-07 3.9E-12 47.7 6.9 78 15-93 4-100 (114)
477 3mbe_C I-AG7; T cell receptor, 98.7 1E-06 3.6E-11 49.5 11.2 76 13-90 4-91 (229)
478 3bdb_A Novel immune-type recep 98.7 8.1E-08 2.8E-12 49.9 6.3 88 16-105 5-112 (137)
479 3qjh_A 5C.C7 alpha chain; immu 98.7 3.6E-07 1.2E-11 50.6 9.1 76 13-90 6-93 (205)
480 1dee_B IGM RF 2A2; FAB-IBP com 98.7 9.3E-07 3.2E-11 49.2 10.9 85 4-94 116-216 (223)
481 3gsn_A RA14 TCR alpha chain (T 98.7 1.5E-07 5.1E-12 51.9 7.3 76 14-90 4-93 (199)
482 1jtp_A Single-domain antibody; 98.7 2.5E-06 8.5E-11 44.8 11.7 73 18-91 8-101 (148)
483 4fmk_A Poliovirus receptor-rel 98.7 6.5E-07 2.2E-11 49.2 9.9 99 5-106 116-219 (225)
484 1oga_E TRBC1, T-cell receptor 98.7 1.7E-07 6E-12 53.0 7.7 77 13-91 6-98 (252)
485 1igt_B IGG2A intact antibody - 98.7 1.1E-07 3.8E-12 57.8 7.3 84 10-94 238-330 (444)
486 3nl4_H Antigen binding fragmen 98.7 1.6E-08 5.6E-13 55.8 3.3 85 4-94 110-203 (215)
487 2yc1_A Single chain antibody f 98.7 5.7E-07 2E-11 45.2 8.6 74 17-91 7-101 (117)
488 4ei6_A Valpha1 XV19 type II na 98.7 4.9E-07 1.7E-11 50.1 8.9 77 13-90 5-94 (208)
489 2bnu_A TCR alpha chain, T-cell 98.7 3.7E-07 1.3E-11 50.4 8.4 77 14-91 4-94 (203)
490 1n4x_H Immunoglobulin heavy ch 98.6 6.4E-07 2.2E-11 45.3 8.7 74 17-91 7-101 (120)
491 2nw2_A ELS4 TCR alpha chain; T 98.6 6.6E-07 2.2E-11 49.3 9.3 73 17-90 6-91 (200)
492 1iga_A IGA1; immunoglobulin; N 98.6 1.2E-06 4.1E-11 53.8 11.3 78 15-93 6-104 (475)
493 1sy6_A T-cell surface glycopro 98.6 4E-08 1.4E-12 54.1 4.4 57 22-91 15-71 (204)
494 3pl6_D MBP peptide / T-cell re 98.6 1.4E-07 4.6E-12 53.8 6.7 76 10-92 145-239 (268)
495 3fku_X Neutralizing antibody F 98.6 2.1E-07 7.1E-12 53.6 7.5 74 17-91 7-101 (280)
496 3liz_H 4C3 monoclonal antibody 98.6 4.7E-07 1.6E-11 51.3 8.8 74 17-91 7-101 (253)
497 2dru_A Chimera of CD48 antigen 98.6 2E-07 6.9E-12 50.4 7.0 56 24-94 114-170 (180)
498 1op3_H FAB 2G12, heavy chain; 98.6 1.1E-07 3.9E-12 52.9 6.1 87 4-94 118-214 (225)
499 1lk2_B Beta-2-microglobulin; c 98.6 1.2E-06 4E-11 43.0 9.1 81 9-92 3-86 (99)
500 3umt_A SCFV heavy chain and li 98.6 5.3E-07 1.8E-11 51.1 8.8 72 19-91 11-103 (256)
No 1
>3knb_B Obscurin-like protein 1; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 2wp3_O* 2wwm_C 2wwk_O
Probab=99.84 E-value=1.5e-19 Score=90.74 Aligned_cols=96 Identities=30% Similarity=0.507 Sum_probs=78.1
Q ss_pred CCCeeEEcCcceeeecCCcEEEEEEEeccCCCeEEEEECCeeccCCCCceEEEeCCCCCeEEEEccCCCCCCCeEEEEEe
Q psy2442 9 DPPEITLRPRNQAVKAGGITSFYCIARGDPIPVIQWRKNGKRVSGTQSRYMVQEFPPGGSLLRIEPVRHARDDAVYECVA 88 (111)
Q Consensus 9 ~~p~~~~~~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~g~y~c~~ 88 (111)
.+|.|...+..+.+..|+.+.|.|.+.|.|.|.+.|++++..+... .++.+.... ....|.|.++.. .|.|.|.|.+
T Consensus 12 ~pP~f~~~p~~~~v~~G~~~~l~C~~~G~P~p~v~W~k~g~~l~~~-~~~~~~~~~-~~~~L~I~~v~~-~D~G~Y~C~a 88 (107)
T 3knb_B 12 SPPCFLRFPRPVRVVSGAEAELKCVVLGEPPPVVVWEKGGQQLAAS-ERLSFPADG-AEHGLLLTAALP-TDAGVYVCRA 88 (107)
T ss_dssp EEEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCC-SSEECCEET-TEEEEEESSCCG-GGCEEEEEEE
T ss_pred CCCEEEeCCCcEEEeCCCcEEEEEEEEEecCCEEEEEECcccccce-eeEEEeecC-ceEEEEEecCCh-hhCEEEEEEE
Confidence 3678888888889999999999999999999999999999998654 555543322 345699999998 9999999999
Q ss_pred eeCCCceEeeEEEEEEecCC
Q psy2442 89 ENGVGDAVSAEASLTVYEGE 108 (111)
Q Consensus 89 ~~~~~~~~~~~~~l~~~~~~ 108 (111)
.|..|.. ...+.|.|..+|
T Consensus 89 ~N~~G~~-~~~~~l~V~~pP 107 (107)
T 3knb_B 89 RNAAGEA-YAAAAVTVLEPP 107 (107)
T ss_dssp EETTEEE-EEEEEEEEEC--
T ss_pred EECCCEE-EEEEEEEEEcCC
Confidence 9999875 778888887764
No 2
>2cqv_A MLCK, myosin light chain kinase, smooth muscle and non- muscle isozymes; IG fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.82 E-value=3.1e-18 Score=86.70 Aligned_cols=99 Identities=26% Similarity=0.410 Sum_probs=80.9
Q ss_pred CCCeeEEcCcceeeecCCcEEEEEEEeccCCCeEEEEECCeeccCCCCceEEEeCCCCCeEEEEccCCCCCCCeEEEEEe
Q psy2442 9 DPPEITLRPRNQAVKAGGITSFYCIARGDPIPVIQWRKNGKRVSGTQSRYMVQEFPPGGSLLRIEPVRHARDDAVYECVA 88 (111)
Q Consensus 9 ~~p~~~~~~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~g~y~c~~ 88 (111)
.+|.+...+..+.+..|+.+.|.|.+.+.|.+.+.|++++..+... .++.+.... ....|.|.++.. .|.|.|.|.+
T Consensus 6 ~pp~i~~~~~~~~v~~G~~v~l~C~~~g~p~p~i~W~k~~~~~~~~-~~~~~~~~~-~~~~L~I~~v~~-~D~G~Y~C~a 82 (114)
T 2cqv_A 6 SGPQIIQFPEDQKVRAGESVELFGKVTGTQPITCTWMKFRKQIQES-EHMKVENSE-NGSKLTILAARQ-EHCGCYTLLV 82 (114)
T ss_dssp CCCEESCCCCSEEEETTCCEEEEEEEESSSSCEEEEEESSSBCCCS-SSEEEEECS-SEEEEEETTCCT-TTCEEEEEEE
T ss_pred CCCEEEeCCCCeEEeCCCeEEEEEEEEcCCCCEEEEEECCEECcCC-CCEEEEEcC-CEEEEEECCCCh-hcCEEEEEEE
Confidence 4677777777788999999999999999999999999999887643 455554322 345699999998 9999999999
Q ss_pred eeCCCceEeeEEEEEEecCCCCC
Q psy2442 89 ENGVGDAVSAEASLTVYEGEEKP 111 (111)
Q Consensus 89 ~~~~~~~~~~~~~l~~~~~~~~p 111 (111)
.|..|.. ...+.|.|.+.|.+|
T Consensus 83 ~N~~g~~-~~~~~l~V~~~p~~P 104 (114)
T 2cqv_A 83 ENKLGSR-QAQVNLTVVDKPDPP 104 (114)
T ss_dssp ECSSCEE-ECCEEEEEECSCSCC
T ss_pred EECCCcE-EEEEEEEEECCCCCC
Confidence 9999874 778888888777654
No 3
>3knb_A Titin; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=99.80 E-value=3.2e-18 Score=84.91 Aligned_cols=93 Identities=23% Similarity=0.520 Sum_probs=74.8
Q ss_pred CCeeEEcCcceeeecCCcEEEEEEEeccCCCeEEEEECCeeccCCC-CceEEEeCCCCCeEEEEccCCCCCCCeEEEEEe
Q psy2442 10 PPEITLRPRNQAVKAGGITSFYCIARGDPIPVIQWRKNGKRVSGTQ-SRYMVQEFPPGGSLLRIEPVRHARDDAVYECVA 88 (111)
Q Consensus 10 ~p~~~~~~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~d~g~y~c~~ 88 (111)
+|.+...+..+.+..|+.+.|.|.+.|.|.|.+.|++++..+.... .++...... ....|.|.++.. .|+|.|.|.+
T Consensus 5 PP~i~~~p~~~~v~~G~~~~l~C~~~g~P~p~v~W~k~g~~i~~~~~~~~~~~~~~-~~~~L~I~~~~~-~D~G~Y~C~a 82 (100)
T 3knb_A 5 PPKIEALPSDISIDEGKVLTVACAFTGEPTPEVTWSCGGRKIHSQEQGRFHIENTD-DLTTLIIMDVQK-QDGGLYTLSL 82 (100)
T ss_dssp EEEECCCCSEEEEETTSEEEEEEEEEEESCCEEEEEETTEECCTTGGGTEEEEECS-SEEEEEESSCCG-GGCEEEEEEE
T ss_pred CCEEEeCCCcEEEeCCCeEEEEEEEEEecCCEEEEEECceEeeeeccceeeeeccc-ceEEEEEcCCCc-cCCEEEEEEE
Confidence 5666666777889999999999999999999999999999986432 355554432 345699999998 9999999999
Q ss_pred eeCCCceEeeEEEEEEe
Q psy2442 89 ENGVGDAVSAEASLTVY 105 (111)
Q Consensus 89 ~~~~~~~~~~~~~l~~~ 105 (111)
.|..|.. +..+.|.|.
T Consensus 83 ~N~~G~~-~~~~~l~V~ 98 (100)
T 3knb_A 83 GNEFGSD-SATVNIHIR 98 (100)
T ss_dssp EETTEEE-EEEEEEEEE
T ss_pred EECCCEE-EEEEEEEEE
Confidence 9999874 777777664
No 4
>2kkq_A Myotilin; unknown function, actin-binding, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=99.79 E-value=6.1e-18 Score=85.95 Aligned_cols=101 Identities=22% Similarity=0.347 Sum_probs=81.6
Q ss_pred cCCCeeEEcCcceeeecCCcEEEEEEEeccCCCeEEEEECCeeccCCCCceEEEeCCCCCeEEEEccCCCCCCCeEEEEE
Q psy2442 8 LDPPEITLRPRNQAVKAGGITSFYCIARGDPIPVIQWRKNGKRVSGTQSRYMVQEFPPGGSLLRIEPVRHARDDAVYECV 87 (111)
Q Consensus 8 ~~~p~~~~~~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~g~y~c~ 87 (111)
..+|.+...+..+.+..|+.+.|.|.+.+.|.+.+.|++++..+.....++...........|.|.++.. .|.|.|.|.
T Consensus 13 ~~~p~f~~~p~~~~v~~G~~v~L~C~~~g~p~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~-~D~G~Y~C~ 91 (116)
T 2kkq_A 13 KRAPMFIYKPQSKKVLEGDSVKLECQISAIPPPKLFWKRNNEMVQFNTDRISLYQDNTGRVTLLIKDVNK-KDAGWYTVS 91 (116)
T ss_dssp CBCCCBSSCCCCEEEETTEEEEEEEEBCCBSCCEEEEEETTEECCCCBTTEEEEECTTCEEEEEEEEECG-GGCEEEEEE
T ss_pred CCCCeEEeCCCcEEEeCCCcEEEEEEEeccCCCEEEEEECCEECcCCCCeEEEEeCCCCeEEEEECCCCc-ccCEEEEEE
Confidence 4567777778888999999999999999999999999999998865445666554322223699999998 999999999
Q ss_pred eeeCCCceEeeEEEEEEecCCCC
Q psy2442 88 AENGVGDAVSAEASLTVYEGEEK 110 (111)
Q Consensus 88 ~~~~~~~~~~~~~~l~~~~~~~~ 110 (111)
+.|..|.. ...+.|.|..+|..
T Consensus 92 a~N~~G~~-~~~~~l~V~~~p~~ 113 (116)
T 2kkq_A 92 AVNEAGVT-TCNTRLDVTARPNQ 113 (116)
T ss_dssp EEETTEEE-EEEEEEEEECCSCC
T ss_pred EEcCCCeE-EEEEEEEEeCCCCC
Confidence 99999874 77888888877654
No 5
>2dm2_A Palladin; beta-sandwich, KIAA0992, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.79 E-value=3.4e-18 Score=86.04 Aligned_cols=102 Identities=26% Similarity=0.412 Sum_probs=82.1
Q ss_pred cCCCeeEEcCcceeeecCCcEEEEEEEeccCCCeEEEEECCeeccCCCCceEEEeCCCCCeEEEEccCCCCCCCeEEEEE
Q psy2442 8 LDPPEITLRPRNQAVKAGGITSFYCIARGDPIPVIQWRKNGKRVSGTQSRYMVQEFPPGGSLLRIEPVRHARDDAVYECV 87 (111)
Q Consensus 8 ~~~p~~~~~~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~g~y~c~ 87 (111)
..+|.+...+..+.+..|+.+.|.|.+.+.|.+.+.|++++..+.....++...........|.|.++.. .|.|.|.|.
T Consensus 6 ~~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~g~~~~~~~~~~~~~~~~~~~~~L~i~~v~~-~D~G~Y~C~ 84 (110)
T 2dm2_A 6 SGAPFFEMKLKHYKIFEGMPVTFTCRVAGNPKPKIYWFKDGKQISPKSDHYTIQRDLDGTCSLHTTASTL-DDDGNYTIM 84 (110)
T ss_dssp SCCCCBSSCCCCEEEETTCCEEEEEEBCCSSCCEEEEECSSCBCCTTCSSEEEEECTTCEEEEEESSCCT-TTCSCCEEE
T ss_pred CCCCEEEecCcCeEEeCCCeEEEEEEEEecCCCEEEEEECCEECCCCCCeEEEEECCCcEEEEEECCCCh-hhCEEEEEE
Confidence 3567777677778899999999999999999999999999988865445666554322334699999998 999999999
Q ss_pred eeeCCCceEeeEEEEEEecCCCCC
Q psy2442 88 AENGVGDAVSAEASLTVYEGEEKP 111 (111)
Q Consensus 88 ~~~~~~~~~~~~~~l~~~~~~~~p 111 (111)
+.|..|.. ...+.|.|...+..|
T Consensus 85 a~N~~g~~-~~~~~l~V~~~~~~P 107 (110)
T 2dm2_A 85 AANPQGRI-SCTGRLMVQAVNSGP 107 (110)
T ss_dssp EECTTCCE-EECCCEEEECCSCCS
T ss_pred EEECCCeE-EEEEEEEEECCCCCC
Confidence 99999875 777888888877665
No 6
>3qp3_A Titin; I-SET IG-like, sarcomere, M-BAND, transferase; 2.00A {Homo sapiens}
Probab=99.78 E-value=8.6e-18 Score=83.56 Aligned_cols=100 Identities=29% Similarity=0.415 Sum_probs=79.8
Q ss_pred EEecCCCeeEEcCcceeeecCCcEEEEEEEeccCCCeEEEEECCeeccCCCCceEEEeCCCCCeEEEEccCCCCCCCeEE
Q psy2442 5 VRFLDPPEITLRPRNQAVKAGGITSFYCIARGDPIPVIQWRKNGKRVSGTQSRYMVQEFPPGGSLLRIEPVRHARDDAVY 84 (111)
Q Consensus 5 l~v~~~p~~~~~~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~g~y 84 (111)
|.+..+|.+...+....+..|+.+.|.|.+.+.|.+.+.|++++..+... .++...... ....|.|.++.. .|.|.|
T Consensus 3 l~~~~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~i~W~k~~~~~~~~-~~~~~~~~~-~~~~L~i~~~~~-~D~G~Y 79 (103)
T 3qp3_A 3 FTLDHAPRITLRMRSHRVPCGQNTRFILNVQSKPTAEVKWYHNGVELQES-SKIHYTNTS-GVLTLEILDCHT-DDSGTY 79 (103)
T ss_dssp TTTCEEEEEEECCCCEEEETTCCEEEEEEEEEESCCEEEEEETTEECCCC-SSEEEEEET-TEEEEEECSCCG-GGCEEE
T ss_pred CCCCCCCEEEeCCcceEEeCCCeEEEEEEEEecCCCEEEEEECCEECCCC-CCEEEEECC-CEEEEEEcCCCc-ccCEEE
Confidence 34556788888888888999999999999999999999999999988654 455444322 334599999998 999999
Q ss_pred EEEeeeCCCceEeeEEEEEEecCC
Q psy2442 85 ECVAENGVGDAVSAEASLTVYEGE 108 (111)
Q Consensus 85 ~c~~~~~~~~~~~~~~~l~~~~~~ 108 (111)
.|.+.|..|.. .....|.|.+.+
T Consensus 80 ~C~a~N~~G~~-~~~~~l~V~~~~ 102 (103)
T 3qp3_A 80 RAVCTNYKGEA-SDYATLDVTGGD 102 (103)
T ss_dssp EEEEEETTEEE-EEEEEEEEECC-
T ss_pred EEEEEeCCCcE-EEEEEEEEECCC
Confidence 99999999874 777788776543
No 7
>3kvq_A Vascular endothelial growth factor receptor 2; vegfr2, angiogenesis, ATP-binding, developmental protein, differentiation, glycoprotein; 2.70A {Homo sapiens} SCOP: b.1.1.0
Probab=99.78 E-value=3e-18 Score=85.85 Aligned_cols=101 Identities=31% Similarity=0.451 Sum_probs=67.2
Q ss_pred eEEecCCCeeEEcCcceeeecCCcEEEEEEEeccCCCeEEEEECCeeccCCCCceEEEeCCCCCeEEEEccCCCCCCCeE
Q psy2442 4 KVRFLDPPEITLRPRNQAVKAGGITSFYCIARGDPIPVIQWRKNGKRVSGTQSRYMVQEFPPGGSLLRIEPVRHARDDAV 83 (111)
Q Consensus 4 ~l~v~~~p~~~~~~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~g~ 83 (111)
.|.+..+|.+...+....+..|+.+.|.|.+.+.|.+.+.|++++..+... .++.... ....|.+.++.. .|.|.
T Consensus 4 ~v~~~~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~i~W~~~~~~~~~~-~~~~~~~---~~~~L~i~~v~~-~D~G~ 78 (108)
T 3kvq_A 4 TVLERVAPTITGNLENQTTSIGESIEVSCTASGNPPPQIMWFKDNETLVED-SGIVLKD---GNRNLTIRRVRK-EDEGL 78 (108)
T ss_dssp -------CCCBSCCCCEEEETTCCEEEECBCC----CCEEEEESSSBCCCB-TTEEEET---TTTEEEECSCCG-GGCEE
T ss_pred eECccCCCceecCCCCeEEeCCCeEEEEEECcCcCCCeEEEEECCeEcccC-CCeEEeC---CCcEEEEeecCc-ccCEE
Confidence 456677888887777888999999999999999999999999998877543 3333332 345599999998 99999
Q ss_pred EEEEeeeCCCceEeeEEEEEEecCCCC
Q psy2442 84 YECVAENGVGDAVSAEASLTVYEGEEK 110 (111)
Q Consensus 84 y~c~~~~~~~~~~~~~~~l~~~~~~~~ 110 (111)
|.|.+.|..|.. ...+.|.|.+++..
T Consensus 79 Y~C~a~n~~g~~-~~~~~l~V~~~~~~ 104 (108)
T 3kvq_A 79 YTCQACSVLGCA-KVEAFFIIEGAQEK 104 (108)
T ss_dssp EEEEEC----CE-EEEEEEEEEC----
T ss_pred EEEEEEeCCCce-EEEEEEEEeCCCcc
Confidence 999999998875 77888888877654
No 8
>2kdg_A Myotilin; immonoglobulin domain, actin-binding, structural protein, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=99.77 E-value=2.2e-17 Score=81.66 Aligned_cols=96 Identities=29% Similarity=0.474 Sum_probs=74.5
Q ss_pred CCCeeEEcCcceeeecCCcEEEEEEEeccCCCeEEEEECCeeccCCCCceEEEeCCCCCeEEEEccCCCCCCCeEEEEEe
Q psy2442 9 DPPEITLRPRNQAVKAGGITSFYCIARGDPIPVIQWRKNGKRVSGTQSRYMVQEFPPGGSLLRIEPVRHARDDAVYECVA 88 (111)
Q Consensus 9 ~~p~~~~~~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~g~y~c~~ 88 (111)
.+|.+...+..+.+..|+.+.|.|.+.+.|.+.+.|++++..+............+ ....|.|..+.. .|+|.|.|.+
T Consensus 4 ~~P~~~~~p~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~-~~~~L~i~~v~~-~D~G~Y~C~a 81 (100)
T 2kdg_A 4 GPPRFIQVPENMSIDEGRFCRMDFKVSGLPAPDVSWYLNGRTVQSDDLHKMIVSEK-GLHSLIFEVVRA-SDAGAYACVA 81 (100)
T ss_dssp EEEECCCCCCCEEEETTCCEEEEEECEEESCCEEEEEETTEEECCCSSSCEEEETT-TEEEEEESSCCG-GGCEEEEEEE
T ss_pred CCCeEEeCCCCEEecCCCEEEEEEEEEeeCCCEEEEEECCEECcCCCcEEEEEcCC-CeEEEEECCCCc-ccCEEEEEEE
Confidence 45666666777788999999999999999999999999999886543222222211 334699999998 9999999999
Q ss_pred eeCCCceEeeEEEEEEecC
Q psy2442 89 ENGVGDAVSAEASLTVYEG 107 (111)
Q Consensus 89 ~~~~~~~~~~~~~l~~~~~ 107 (111)
.|..|.. ...+.|.|...
T Consensus 82 ~n~~g~~-~~~~~l~V~~~ 99 (100)
T 2kdg_A 82 KNRAGEA-TFTVQLDVLAK 99 (100)
T ss_dssp EETTEEE-EEEEEEEEECC
T ss_pred EcCCCeE-EEEEEEEEEec
Confidence 9999874 77888877654
No 9
>2edj_A Roundabout homolog 2; KIAA1568 protein, beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.77 E-value=3.9e-17 Score=80.79 Aligned_cols=95 Identities=37% Similarity=0.613 Sum_probs=76.9
Q ss_pred cCCCeeEEcCcceeeecCCcEEEEEEEeccCCCeEEEEECCeeccCCCCceEEEeCCCCCeEEEEccCCCCCCCeEEEEE
Q psy2442 8 LDPPEITLRPRNQAVKAGGITSFYCIARGDPIPVIQWRKNGKRVSGTQSRYMVQEFPPGGSLLRIEPVRHARDDAVYECV 87 (111)
Q Consensus 8 ~~~p~~~~~~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~g~y~c~ 87 (111)
..+|.+...+....+..|+.+.|.|.+.+.|.+.+.|++++..+.....++... ....|.|.++.. .|.|.|.|.
T Consensus 6 ~~~P~i~~~p~~~~v~~G~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~----~~~~L~i~~v~~-~d~G~Y~C~ 80 (100)
T 2edj_A 6 SGPPIILQGPANQTLAVDGTALLKCKATGDPLPVISWLKEGFTFPGRDPRATIQ----EQGTLQIKNLRI-SDTGTYTCV 80 (100)
T ss_dssp CSSCEEEECCCCEEEESSSEEEECCEEECSSCCEEEEEESSSEESSSCSSCEEC----TTCCEEEESCCT-TTCCEEEEE
T ss_pred CCCCEEEeCcCCEEEcCCCcEEEEEEEEEcCCCEEEEEECCEECCCCCCCEEEc----CCCEEEEccCCc-ccCEEEEEE
Confidence 356788778888889999999999999999999999999988876443454443 233599999998 999999999
Q ss_pred eeeCCCceEeeEEEEEEecCC
Q psy2442 88 AENGVGDAVSAEASLTVYEGE 108 (111)
Q Consensus 88 ~~~~~~~~~~~~~~l~~~~~~ 108 (111)
+.|..|.. ...+.|.|.+++
T Consensus 81 a~n~~g~~-~~~~~l~V~~~~ 100 (100)
T 2edj_A 81 ATSSSGET-SWSAVLDVTESG 100 (100)
T ss_dssp EECSSCCC-BCCEEEEEESCC
T ss_pred EEcCCCCE-EEEEEEEEecCC
Confidence 99998875 777788777653
No 10
>1fhg_A Telokin; immunoglobulin fold, beta barrel, contractIle protein; 2.00A {Meleagris gallopavo} SCOP: b.1.1.4 PDB: 1tlk_A
Probab=99.76 E-value=4e-17 Score=86.62 Aligned_cols=102 Identities=27% Similarity=0.378 Sum_probs=80.9
Q ss_pred eEEecCCCeeEEcCcceeeecCCcEEEEEEEeccCCCeEEEEECCeeccCCCCceEEEeCCCCCeEEEEccCCCCCCCeE
Q psy2442 4 KVRFLDPPEITLRPRNQAVKAGGITSFYCIARGDPIPVIQWRKNGKRVSGTQSRYMVQEFPPGGSLLRIEPVRHARDDAV 83 (111)
Q Consensus 4 ~l~v~~~p~~~~~~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~g~ 83 (111)
.+.+..+|.+...+..+.+..|+.+.|.|.+.+.|.+.+.|++++..+... .++...........|.|.++.. .|.|.
T Consensus 35 ~~~v~~~P~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~v~W~k~g~~~~~~-~~~~~~~~~~~~~~L~I~~v~~-~D~G~ 112 (154)
T 1fhg_A 35 EEKPHVKPYFTKTILDMEVVEGSAARFDCKVEGYPDPEVMWFKDDNPVKES-RHFQIDYDEEGNCSLTISEVCG-DDDAK 112 (154)
T ss_dssp CCCCCEEEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCS-SSEEEEECTTCEEEEEESSCCG-GGCEE
T ss_pred cccCCCCCeEEccCCcEEEeCCCeEEEEEEEEEecCCEEEEEECCEECCCC-CcEEEEECCCCeEEEEECCCCh-hcCEE
Confidence 345556788888888888999999999999999999999999999988643 4555543222335699999998 99999
Q ss_pred EEEEeeeCCCceEeeEEEEEEecCC
Q psy2442 84 YECVAENGVGDAVSAEASLTVYEGE 108 (111)
Q Consensus 84 y~c~~~~~~~~~~~~~~~l~~~~~~ 108 (111)
|.|.+.|..|.. ...+.|.|..+|
T Consensus 113 Y~C~a~N~~G~~-~~~~~l~V~~~p 136 (154)
T 1fhg_A 113 YTCKAVNSLGEA-TCTAELLVETMG 136 (154)
T ss_dssp EEEEEEETTEEE-EEEEEEEEECC-
T ss_pred EEEEEEECCCeE-EEEEEEEEeCcC
Confidence 999999999874 777778777655
No 11
>2dm3_A KIAA0992 protein, palladin; beta-sandwich, myopalladin, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.76 E-value=7.4e-18 Score=84.72 Aligned_cols=100 Identities=30% Similarity=0.484 Sum_probs=80.3
Q ss_pred CCCeeEEcCcceeeecCCcEEEEEEEeccCCCeEEEEECCeeccCCCCceEEEeCCCCCeEEEEccCCCCCCCeEEEEEe
Q psy2442 9 DPPEITLRPRNQAVKAGGITSFYCIARGDPIPVIQWRKNGKRVSGTQSRYMVQEFPPGGSLLRIEPVRHARDDAVYECVA 88 (111)
Q Consensus 9 ~~p~~~~~~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~g~y~c~~ 88 (111)
.+|.+...+..+.+..|+.+.|.|.+.+.|.+.+.|++++..+..... ............|.|.++.. .|.|.|.|.+
T Consensus 8 ~~P~i~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~g~~~~~~~~-~~~~~~~~~~~~L~i~~v~~-~D~G~Y~C~a 85 (110)
T 2dm3_A 8 FRPHFLQAPGDLTVQEGKLCRMDCKVSGLPTPDLSWQLDGKPVRPDSA-HKMLVRENGVHSLIIEPVTS-RDAGIYTCIA 85 (110)
T ss_dssp CCCEEEECCCEEEEESSSCBCCEEEEECSSCCEEECBBSSSBCCCCSS-EEEEECTTSCEEEEESSCCG-GGCSBBCEEE
T ss_pred CCCcEEeCCCcEEEeCCCEEEEEEEEEEcCCCEEEEEECCEECCCCCc-eEEEEecCCeEEEEEeeCCc-ccCEEEEEEE
Confidence 477888888888999999999999999999999999999888764423 22222222345699999998 9999999999
Q ss_pred eeCCCceEeeEEEEEEecCCCCC
Q psy2442 89 ENGVGDAVSAEASLTVYEGEEKP 111 (111)
Q Consensus 89 ~~~~~~~~~~~~~l~~~~~~~~p 111 (111)
.|..|.. ...+.|.|..+|.+|
T Consensus 86 ~n~~g~~-~~~~~l~V~~~p~~P 107 (110)
T 2dm3_A 86 TNRAGQN-SFSLELVVAAKESGP 107 (110)
T ss_dssp ECSSCEE-EECCEEEEECCCCSS
T ss_pred ECCCCEE-EEEEEEEEeCCCCCC
Confidence 9999874 778888888888765
No 12
>1g1c_A Immunoglobulin-like domain I1 from titin; immunoglobulin domain, beta-sandwhich, I-SET, structural protein; 2.10A {Homo sapiens} SCOP: b.1.1.4
Probab=99.76 E-value=1e-16 Score=79.07 Aligned_cols=95 Identities=28% Similarity=0.300 Sum_probs=74.1
Q ss_pred CCCeeEEcCcceeeecCCcEEEEEEEeccCCCeEEEEECCeeccCCCCceEEEeCCCCCeEEEEccCCCCCCCeEEEEEe
Q psy2442 9 DPPEITLRPRNQAVKAGGITSFYCIARGDPIPVIQWRKNGKRVSGTQSRYMVQEFPPGGSLLRIEPVRHARDDAVYECVA 88 (111)
Q Consensus 9 ~~p~~~~~~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~g~y~c~~ 88 (111)
.+|.+...+....+..|+.+.|.|.+.+.|.+.+.|++++..+... .++...........|.|.++.. .|+|.|.|.+
T Consensus 4 ~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~g~~~~~~-~~~~~~~~~~~~~~L~i~~v~~-~D~G~Y~C~a 81 (99)
T 1g1c_A 4 EAPKIFERIQSQTVGQGSDAHFRVRVVGKPDPECEWYKNGVKIERS-DRIYWYWPEDNVCELVIRDVTG-EDSASIMVKA 81 (99)
T ss_dssp EEEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCC-SSEEEEEEETTEEEEEECSCCG-GGCEEEEEEE
T ss_pred CCCceEecCcceEEcCCCcEEEEEEEEEeCCCEEEEEECCEECCCC-CCEEEEEcCCCEEEEEECCCCc-CCCEEEEEEE
Confidence 3567777777788999999999999999999999999999988654 3333322111444699999998 9999999999
Q ss_pred eeCCCceEeeEEEEEEec
Q psy2442 89 ENGVGDAVSAEASLTVYE 106 (111)
Q Consensus 89 ~~~~~~~~~~~~~l~~~~ 106 (111)
.|..|.. .....|.|.+
T Consensus 82 ~N~~g~~-~~~~~l~V~~ 98 (99)
T 1g1c_A 82 INIAGET-SSHAFLLVQA 98 (99)
T ss_dssp EETTEEE-EEEEEEEEEC
T ss_pred EECCCcE-EEEEEEEEec
Confidence 9998874 6677776654
No 13
>3irg_B Obscurin-like protein 1; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_B 2wp3_O* 2wwm_C 2wwk_O
Probab=99.75 E-value=6.3e-17 Score=80.90 Aligned_cols=98 Identities=30% Similarity=0.473 Sum_probs=76.5
Q ss_pred ecCCCeeEEcCcceeeecCCcEEEEEEEeccCCCeEEEEECCeeccCCCCceEEEeCCCCCeEEEEccCCCCCCCeEEEE
Q psy2442 7 FLDPPEITLRPRNQAVKAGGITSFYCIARGDPIPVIQWRKNGKRVSGTQSRYMVQEFPPGGSLLRIEPVRHARDDAVYEC 86 (111)
Q Consensus 7 v~~~p~~~~~~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~g~y~c 86 (111)
+..+|.+...+..+.+..|+.+.|.|.+.+.|.+.+.|++++..+... .++...... ....|.|.++.. .|.|.|.|
T Consensus 10 ~~~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~i~W~~~~~~~~~~-~~~~~~~~~-~~~~L~i~~~~~-~D~G~Y~C 86 (107)
T 3irg_B 10 QGSPPCFLRFPRPVRVVSGAEAELKCVVLGEPPPVVVWEKGGQQLAAS-ERLSFPADG-AEHGLLLTAALP-TDAGVYVC 86 (107)
T ss_dssp CCEEEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCC-SSEECCEET-TEEEEEESSCCG-GGCEEEEE
T ss_pred CCCCCeeEcCCccEEEeCCCeEEEEEEEeecCCCEEEEEECCeECCCC-CcEEEEeCC-CEEEEEEccCCH-HhCEEEEE
Confidence 345677877788888999999999999999999999999999887643 444433211 233599999998 99999999
Q ss_pred EeeeCCCceEeeEEEEEEecCC
Q psy2442 87 VAENGVGDAVSAEASLTVYEGE 108 (111)
Q Consensus 87 ~~~~~~~~~~~~~~~l~~~~~~ 108 (111)
.+.|..|.. ...+.|.|.++|
T Consensus 87 ~a~n~~g~~-~~~~~l~V~~~P 107 (107)
T 3irg_B 87 RARNAAGEA-YAAAAVTVLEPP 107 (107)
T ss_dssp EEEETTEEE-EEEEEEEEEC--
T ss_pred EEEcCCCcE-EEEEEEEEEcCC
Confidence 999998874 777888887664
No 14
>1u2h_A APEG-1, aortic preferentially expressed protein 1; structural genomics, IG-fold I-SET, RGD motif, homophilic adhesion, arterial smooth muscle cells; 0.96A {Homo sapiens}
Probab=99.75 E-value=1.3e-16 Score=78.73 Aligned_cols=95 Identities=29% Similarity=0.470 Sum_probs=74.1
Q ss_pred CCCeeEEcCcceeeecCCcEEEEEEEeccCCCeEEEEECCeeccCCCCceEEEeCCCCCeEEEEccCCCCCCCeEEEEEe
Q psy2442 9 DPPEITLRPRNQAVKAGGITSFYCIARGDPIPVIQWRKNGKRVSGTQSRYMVQEFPPGGSLLRIEPVRHARDDAVYECVA 88 (111)
Q Consensus 9 ~~p~~~~~~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~g~y~c~~ 88 (111)
.+|.+...+....+..|+.+.|.|.+.+.|.+.+.|++++..+.....++.... +.....|.|.++.. .|.|.|.|.+
T Consensus 4 ~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~~~~~~~~~~~~~~~~-~~~~~~L~i~~~~~-~D~G~Y~C~a 81 (99)
T 1u2h_A 4 APPTFKVSLMDQSVREGQDVIMSIRVQGEPKPVVSWLRNRQPVRPDQRRFAEEA-EGGLCRLRILAAER-GDAGFYTCKA 81 (99)
T ss_dssp EEEEEEECCCCEEEETTCCEEEEEEEEEESCCEEEEEETTEECCCBTTEEEEEC-GGGEEEEEESSCCG-GGCEEEEEEE
T ss_pred CCCEEEEcCCceEecCCCEEEEEEEEEEcCCCEEEEEECCEECCCCCCEEEEEC-CCCEEEEEEccCCc-CCCEEEEEEE
Confidence 356777777778899999999999999999999999999998865434444332 11223599999998 9999999999
Q ss_pred eeCCCceEeeEEEEEEec
Q psy2442 89 ENGVGDAVSAEASLTVYE 106 (111)
Q Consensus 89 ~~~~~~~~~~~~~l~~~~ 106 (111)
.|..|.. ...+.|.|.+
T Consensus 82 ~N~~g~~-~~~~~l~V~~ 98 (99)
T 1u2h_A 82 VNEYGAR-QCEARLEVRG 98 (99)
T ss_dssp EETTEEE-EEEEEEEEEC
T ss_pred EECCCce-eEEEEEEEEC
Confidence 9998874 6677776653
No 15
>2e7c_A Myosin-binding protein C, fast-type; IG-like domain, fast MYBP-C, C-protein, skeletal muscle fast-isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.74 E-value=1.2e-16 Score=81.27 Aligned_cols=97 Identities=22% Similarity=0.313 Sum_probs=75.9
Q ss_pred cCCCeeEEc---CcceeeecCCcEEEEEEEeccCCCeEEEEECCeeccCCCCceEEEeCCCCCeEEEEccCCCCCCCeEE
Q psy2442 8 LDPPEITLR---PRNQAVKAGGITSFYCIARGDPIPVIQWRKNGKRVSGTQSRYMVQEFPPGGSLLRIEPVRHARDDAVY 84 (111)
Q Consensus 8 ~~~p~~~~~---~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~g~y 84 (111)
..+|.+... ...+.+..|+.+.|.|.+.+.|.|.+.|++++..+.. .++...... ....|.|.++.. .|+|.|
T Consensus 19 ~~~P~i~~~~~~~~~~~v~~G~~~~l~C~~~g~P~p~i~W~k~g~~l~~--~~~~~~~~~-~~~~L~i~~~~~-~D~G~Y 94 (118)
T 2e7c_A 19 AEPPKIRLPRHLRQTYIRKVGEQLNLVVPFQGKPRPQVVWTKGGAPLDT--SRVHVRTSD-FDTVFFVRQAAR-SDSGEY 94 (118)
T ss_dssp SEEEEECCCTTTSSCEEEESSSCEEEEEEEEEESCCEEEEEETTEECCC--SSCEEEECS-SEEEEEESSCCT-TTCEEE
T ss_pred ccCCeEecCcccCCCEEEECCCEEEEEEEEccCCCCEEEEEECCEECCC--CcEEEEECC-CeEEEEECCCCh-hcCEEE
Confidence 345666432 3557888999999999999999999999999998863 344443322 345599999998 999999
Q ss_pred EEEeeeCCCceEeeEEEEEEecCCC
Q psy2442 85 ECVAENGVGDAVSAEASLTVYEGEE 109 (111)
Q Consensus 85 ~c~~~~~~~~~~~~~~~l~~~~~~~ 109 (111)
.|.+.|..|.. ...+.|.|...|+
T Consensus 95 ~C~a~N~~G~~-~~~~~l~V~~~P~ 118 (118)
T 2e7c_A 95 ELSVQIENMKD-TATIRIRVVEKAG 118 (118)
T ss_dssp EEEEECSSCEE-CCEEEEEEECCCC
T ss_pred EEEEEeCCCeE-EEEEEEEEEcCCC
Confidence 99999999874 7888888887763
No 16
>3puc_A Titin; I-SET IG-like domain, M-BAND, transferase; 0.96A {Homo sapiens}
Probab=99.74 E-value=2.9e-16 Score=77.37 Aligned_cols=93 Identities=28% Similarity=0.554 Sum_probs=74.2
Q ss_pred CCCeeEEcCcceeeecCCcEEEEEEEeccCCCeEEEEECCeeccCCCCceEEEeCCCCCeEEEEccCCCCCCCeEEEEEe
Q psy2442 9 DPPEITLRPRNQAVKAGGITSFYCIARGDPIPVIQWRKNGKRVSGTQSRYMVQEFPPGGSLLRIEPVRHARDDAVYECVA 88 (111)
Q Consensus 9 ~~p~~~~~~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~g~y~c~~ 88 (111)
.+|.+...+....+..|+.+.|.|.+.+.|.+.+.|++++..+... .++...... ....|.+.++.. .|.|.|.|.+
T Consensus 5 ~~P~i~~~~~~~~v~~G~~~~l~C~~~g~p~p~v~W~~~g~~~~~~-~~~~~~~~~-~~~~L~i~~~~~-~d~G~Y~C~a 81 (99)
T 3puc_A 5 SKPVIVTGLQDTTVSSDSVAKFAVKATGEPRPTAIWTKDGKAITQG-GKYKLSEDK-GGFFLEIHKTDT-SDSGLYTCTV 81 (99)
T ss_dssp EEEEEEECCCCEEEESSSCEEEEEEEEEESCCEEEEEETTEECCSS-SSEEEEEET-TEEEEEECSCCG-GGCEEEEEEE
T ss_pred CCCEEEecCccEEEeCCCcEEEEEEEEecCCCEEEEEECCEECcCC-CCEEEEEeC-CEEEEEECCCCc-ccCEEEEEEE
Confidence 4567777777788999999999999999999999999999988644 555554322 334599999998 9999999999
Q ss_pred eeCCCceEeeEEEEEEe
Q psy2442 89 ENGVGDAVSAEASLTVY 105 (111)
Q Consensus 89 ~~~~~~~~~~~~~l~~~ 105 (111)
.|..|.. ...+.|.|.
T Consensus 82 ~n~~g~~-~~~~~l~V~ 97 (99)
T 3puc_A 82 KNSAGSV-SSSCKLTIK 97 (99)
T ss_dssp EETTEEE-EEEEEEEEE
T ss_pred EeCCCcE-eEEEEEEEE
Confidence 9998874 667776664
No 17
>1wit_A Twitchin 18TH IGSF module; immunoglobulin superfamily, I SET, muscle protein; NMR {Caenorhabditis elegans} SCOP: b.1.1.4 PDB: 1wiu_A
Probab=99.72 E-value=2e-16 Score=77.31 Aligned_cols=89 Identities=18% Similarity=0.248 Sum_probs=69.1
Q ss_pred CCeeEEcCcceeeecCCcEEEEEEEeccCCCeEEEEECC--eeccCCCCceEEEeCCCCCeEEEEccCCCCCCCeEEEEE
Q psy2442 10 PPEITLRPRNQAVKAGGITSFYCIARGDPIPVIQWRKNG--KRVSGTQSRYMVQEFPPGGSLLRIEPVRHARDDAVYECV 87 (111)
Q Consensus 10 ~p~~~~~~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~~--~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~g~y~c~ 87 (111)
+|.+...+..+.+..|+.+.|.|.+.|.|.|.+.|++++ ..+... ...... . ....|.|.++.. .|+|.|.|.
T Consensus 2 ~P~i~~~~~~~~v~~G~~~~l~C~~~g~P~p~i~W~k~~~~~~~~~~-~~~~~~--~-~~~~L~i~~~~~-~D~G~Y~C~ 76 (93)
T 1wit_A 2 KPKILTASRKIKIKAGFTHNLEVDFIGAPDPTATWTVGDSGAALAPE-LLVDAK--S-STTSIFFPSAKR-ADSGNYKLK 76 (93)
T ss_dssp CCEECCCCCEEEECTTBCCEEEEEEECCSSCEEEEECSTTTCBCSTT-SEEEEE--T-TEEEEECTTBCG-GGCEEEEEE
T ss_pred CCeEEcCCCceEEeCCCEEEEEEEEEEcCCCEEEEEECCCCcccCCc-EEEEec--C-CEEEEEECCCCh-hcCEEEEEE
Confidence 566665666778899999999999999999999999998 766532 222221 1 345689999998 999999999
Q ss_pred eeeCCCceEeeEEEEEE
Q psy2442 88 AENGVGDAVSAEASLTV 104 (111)
Q Consensus 88 ~~~~~~~~~~~~~~l~~ 104 (111)
+.|..|.. ...+.|.|
T Consensus 77 a~N~~G~~-~~~~~l~V 92 (93)
T 1wit_A 77 VKNELGED-EAIFEVIV 92 (93)
T ss_dssp EEETTEEE-EEEEEEEE
T ss_pred EEcCCCeE-EEEEEEEE
Confidence 99999864 66666654
No 18
>2eo9_A Roundabout homolog 1; beta-sandwich, IG-fold, H-ROBO-1, deleted in U twenty twenty, neurogenesis, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.71 E-value=1.3e-16 Score=81.15 Aligned_cols=94 Identities=36% Similarity=0.580 Sum_probs=75.6
Q ss_pred CCCeeEEcCcceeeecCCcEEEEEEEeccCCCeEEEEECCeeccCCCCceEEEeCCCCCeEEEEccCCCCCCCeEEEEEe
Q psy2442 9 DPPEITLRPRNQAVKAGGITSFYCIARGDPIPVIQWRKNGKRVSGTQSRYMVQEFPPGGSLLRIEPVRHARDDAVYECVA 88 (111)
Q Consensus 9 ~~p~~~~~~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~g~y~c~~ 88 (111)
.+|.+...+....+..|+.+.|.|.+.+.|.+.+.|++++..+.....++.... ...|.|.++.. .|.|.|.|.+
T Consensus 7 ~pP~i~~~p~~~~v~~G~~v~l~C~~~g~p~p~i~W~k~g~~~~~~~~~~~~~~----~~~L~i~~v~~-~D~G~Y~C~a 81 (118)
T 2eo9_A 7 GPPVIRQGPVNQTVAVDGTFVLSCVATGSPVPTILWRKDGVLVSTQDSRIKQLE----NGVLQIRYAKL-GDTGRYTCIA 81 (118)
T ss_dssp CSCCCSBCCCCEEEETTCEEEEECBCCCSSCCEEEEEESSSBCCTTSTTEEEEE----TTEEEEESCCG-GGCCCEEEEE
T ss_pred CCCEEEcCCCCEEEcCCCeEEEEEEEEecCCCEEEEEECCEECcCCCCeEEEcc----CCEEEEccCCc-CCCEEEEEEE
Confidence 466776677778899999999999999999999999999988865445555543 23599999998 9999999999
Q ss_pred eeCCCceEeeEEEEEEecCC
Q psy2442 89 ENGVGDAVSAEASLTVYEGE 108 (111)
Q Consensus 89 ~~~~~~~~~~~~~l~~~~~~ 108 (111)
.|..|.. ...+.|.|...+
T Consensus 82 ~n~~g~~-~~~~~l~V~~~~ 100 (118)
T 2eo9_A 82 STPSGEA-TWSAYIEVQEFG 100 (118)
T ss_dssp ECSSCEE-EEECCEEEECCS
T ss_pred EcCCCcE-EEEEEEEEEeCC
Confidence 9998874 667777776554
No 19
>2yr3_A Myosin light chain kinase, smooth muscle; IG domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.69 E-value=1.8e-16 Score=78.21 Aligned_cols=93 Identities=29% Similarity=0.469 Sum_probs=72.8
Q ss_pred EEecCCCeeEEcCcceeeecCCcEEEEEEEeccCCCeEEEEECCeeccCCCCceEEEeCCCCCeEEEEccCCCCCCCeEE
Q psy2442 5 VRFLDPPEITLRPRNQAVKAGGITSFYCIARGDPIPVIQWRKNGKRVSGTQSRYMVQEFPPGGSLLRIEPVRHARDDAVY 84 (111)
Q Consensus 5 l~v~~~p~~~~~~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~g~y 84 (111)
+.+..+|.+...+....+..|+.+.|.|.+.+.|.+.+.|++++..+.... ..... ....|.|.++.. .|.|.|
T Consensus 6 ~~~~~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~g~~~~~~~--~~~~~---~~~~L~i~~v~~-~D~G~Y 79 (99)
T 2yr3_A 6 SGMEVAPSFSSVLKDCAVIEGQDFVLQCSVRGTPVPRITWLLNGQPIQYAR--STCEA---GVAELHIQDALP-EDHGTY 79 (99)
T ss_dssp SCCCEEEEEEECCCCEEECTTCCEEEECEEEEESCCCCEEEESSSBCSSCC--CEEET---TEEEEEECSCCT-TCCBCE
T ss_pred CCcccCCceeecCCCCEEeCCCeEEEEEEEeeeCCCeEEEEECCEECcccc--eEeeC---CeEEEEECCCCh-hhCEEE
Confidence 345667888877888889999999999999999999999999988875431 12221 345599999998 999999
Q ss_pred EEEeeeCCCceEeeEEEEEE
Q psy2442 85 ECVAENGVGDAVSAEASLTV 104 (111)
Q Consensus 85 ~c~~~~~~~~~~~~~~~l~~ 104 (111)
.|.+.|..|.. ...+.|.|
T Consensus 80 ~C~a~N~~g~~-~~~~~l~V 98 (99)
T 2yr3_A 80 TCLAENALGQV-SCSAWVTV 98 (99)
T ss_dssp EEEEECSSCEE-EEECCEEE
T ss_pred EEEEEECCCeE-EEEEEEEE
Confidence 99999998864 65655544
No 20
>3irg_A Titin; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_A 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=99.69 E-value=1.3e-15 Score=75.13 Aligned_cols=93 Identities=24% Similarity=0.524 Sum_probs=72.3
Q ss_pred CCeeEEcCcceeeecCCcEEEEEEEeccCCCeEEEEECCeeccCC-CCceEEEeCCCCCeEEEEccCCCCCCCeEEEEEe
Q psy2442 10 PPEITLRPRNQAVKAGGITSFYCIARGDPIPVIQWRKNGKRVSGT-QSRYMVQEFPPGGSLLRIEPVRHARDDAVYECVA 88 (111)
Q Consensus 10 ~p~~~~~~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~d~g~y~c~~ 88 (111)
+|.+...+..+.+..|+.+.|.|.+.+.|.+.+.|++++..+... ..++...... ....|.|..+.. .|.|.|.|.+
T Consensus 5 pP~i~~~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~-~~~~L~i~~v~~-~D~G~Y~C~a 82 (100)
T 3irg_A 5 PPKIEALPSDISIDEGKVLTVACAFTGEPTPEVTWSCGGRKIHSQEQGRFHIENTD-DLTTLIIMDVQK-QDGGLYTLSL 82 (100)
T ss_dssp EEEECCCCSEEEEETTSEEEEEEEEEEESCCEEEEEETTEECCTTGGGTEEEEECS-SEEEEEESSCCG-GGCEEEEEEE
T ss_pred CCeeecCCCcEEEcCCCcEEEEEEEEEcCCCceEEEECCEEeecCCCCEEEEEecC-CEEEEEEeecCc-ccCEEEEEEE
Confidence 455555566678889999999999999999999999999887532 2455554322 335699999998 9999999999
Q ss_pred eeCCCceEeeEEEEEEe
Q psy2442 89 ENGVGDAVSAEASLTVY 105 (111)
Q Consensus 89 ~~~~~~~~~~~~~l~~~ 105 (111)
.|..|.. ...+.|.|.
T Consensus 83 ~n~~g~~-~~~~~l~V~ 98 (100)
T 3irg_A 83 GNEFGSD-SATVNIHIR 98 (100)
T ss_dssp EETTEEE-EEEEEEEEE
T ss_pred EeCCCcE-EEEEEEEEE
Confidence 9998874 777777664
No 21
>1nct_A Titin; cell adhesion, glycoprotein, transmembrane, repeat, brain, immunoglobulin fold, alternative splicing, signal, muscle protein; NMR {Homo sapiens} SCOP: b.1.1.4 PDB: 1ncu_A 1tnm_A 1tnn_A
Probab=99.69 E-value=3.6e-16 Score=78.23 Aligned_cols=93 Identities=30% Similarity=0.512 Sum_probs=75.1
Q ss_pred CCCeeEEcCcceeeecCCcEEEEEEEeccCCCeEEEEECCeeccCCCCceEEEeCCCCCeEEEEccCCCCCCCeEEEEEe
Q psy2442 9 DPPEITLRPRNQAVKAGGITSFYCIARGDPIPVIQWRKNGKRVSGTQSRYMVQEFPPGGSLLRIEPVRHARDDAVYECVA 88 (111)
Q Consensus 9 ~~p~~~~~~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~g~y~c~~ 88 (111)
.+|.+...+..+.+..|+.+.|.|.+.+.|.+.+.|++++..+... .++...... ....|.|.++.. .|.|.|.|.+
T Consensus 13 ~~~~i~~~p~~~~v~~G~~v~L~C~~~g~p~p~v~W~k~g~~l~~~-~~~~~~~~~-~~~~L~I~~v~~-~D~G~Y~C~a 89 (106)
T 1nct_A 13 LAARILTKPRSMTVYEGESARFSCDTDGEPVPTVTWLRKGQVLSTS-ARHQVTTTK-YKSTFEISSVQA-SDEGNYSVVV 89 (106)
T ss_dssp CCCEEEECCCCEEESSSSCEECCEEEECSSCCBCCBCSSSSCCTTC-SSEEEEECS-SEEEEEECCCCS-SCCSEEEECC
T ss_pred CCCEEEECCCCEEEeCCCcEEEEEEEEEcCCCEEEEEECCEECCCC-CCEEEEECC-CEEEEEECcCCc-hhCEEEEEEE
Confidence 4677788888889999999999999999999999999998877543 455554322 345699999998 9999999999
Q ss_pred eeCCCceEeeEEEEEEe
Q psy2442 89 ENGVGDAVSAEASLTVY 105 (111)
Q Consensus 89 ~~~~~~~~~~~~~l~~~ 105 (111)
.|..|.. ...+.|.|.
T Consensus 90 ~N~~G~~-~~~~~l~V~ 105 (106)
T 1nct_A 90 ENSEGKQ-EAEFTLTIQ 105 (106)
T ss_dssp BCSSCBC-CEEEEEEEC
T ss_pred EeCCCeE-EEEEEEEEE
Confidence 9998874 677776653
No 22
>2yuz_A Myosin-binding protein C, SLOW-type; immunoglobulin domain, SLOW-type myosin-binding protein C, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.69 E-value=1.3e-15 Score=75.41 Aligned_cols=93 Identities=22% Similarity=0.210 Sum_probs=72.8
Q ss_pred CCeeEEcCcceeeecCCcEEEEEEEeccCCCeEEEEECCeeccCCCCceEEEeCCCCCeEEEEccCCCCCCCeEEEEEee
Q psy2442 10 PPEITLRPRNQAVKAGGITSFYCIARGDPIPVIQWRKNGKRVSGTQSRYMVQEFPPGGSLLRIEPVRHARDDAVYECVAE 89 (111)
Q Consensus 10 ~p~~~~~~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~g~y~c~~~ 89 (111)
++.+...+..+.+..|+.+.|.|.+ .|.+.+.|+++|..+... .++.+.... ....|.|.++.. .|+|.|.|.+.
T Consensus 7 p~~~~~~~~~~~v~~G~~v~l~C~v--~p~p~v~W~k~g~~l~~~-~r~~i~~~~-~~~~L~I~~v~~-~D~G~Y~C~a~ 81 (100)
T 2yuz_A 7 GLKILTPLTDQTVNLGKEICLKCEI--SENIPGKWTKNGLPVQES-DRLKVVQKG-RIHKLVIANALT-EDEGDYVFAPD 81 (100)
T ss_dssp CCCCSBCCCCEEEETTSCCCEEEEC--SSCCCEEEEETTEECCCC-SSEEEEECS-SEEEEEESSCCG-GGCSEEEEEES
T ss_pred CCEEeccCCceEEcCCCCEEEEEEe--CCCCeEEEEECCEECCCC-CcEEEEEeC-CEEEEEECCCCh-hhCEEEEEEEc
Confidence 5666667777889999999999999 678899999999998654 566655421 334599999998 99999999999
Q ss_pred eCCCceEeeEEEEEEecCCCC
Q psy2442 90 NGVGDAVSAEASLTVYEGEEK 110 (111)
Q Consensus 90 ~~~~~~~~~~~~l~~~~~~~~ 110 (111)
|. . ......|.|.++|..
T Consensus 82 N~--~-~~~~a~L~V~~~P~s 99 (100)
T 2yuz_A 82 AY--N-VTLPAKVHVISGPSS 99 (100)
T ss_dssp SS--C-CCEEEEEEEECCSCC
T ss_pred CC--C-eeEEEEEEEeCCCCC
Confidence 97 2 256677788887753
No 23
>3bfo_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1 (isoform 2); hydrolase, immunoglobulin domain, nucleus, protease; 1.15A {Homo sapiens}
Probab=99.68 E-value=2.5e-15 Score=73.10 Aligned_cols=84 Identities=24% Similarity=0.383 Sum_probs=67.0
Q ss_pred CCeeEEcCcceeeecCCcEEEEEEEeccCCCeEEEEECCeeccCCCCceEEEeCCCCCeEEEEccCCCCCCCeEEEEEee
Q psy2442 10 PPEITLRPRNQAVKAGGITSFYCIARGDPIPVIQWRKNGKRVSGTQSRYMVQEFPPGGSLLRIEPVRHARDDAVYECVAE 89 (111)
Q Consensus 10 ~p~~~~~~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~g~y~c~~~ 89 (111)
++.+...+....+..|+.+.|.|.+.+.|.+.+.|++++..+... ....|.+.++.. .|+|.|.|.+.
T Consensus 3 ~~~i~~~p~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~-----------~~~~L~i~~v~~-~d~G~Y~C~a~ 70 (91)
T 3bfo_A 3 KLQICVEPTSQKLMPGSTLVLQCVAVGSPIPHYQWFKNELPLTHE-----------TKKLYMVPYVDL-EHQGTYWCHVY 70 (91)
T ss_dssp CCEEEECCCCEEECTTSCEEEECEEECSSCCEEEEEETTEECTTC-----------CSSEEEESSCCG-GGCEEEEEEEE
T ss_pred ceEEEECCCccEecCCCcEEEEEEeccCCCCEEEEEcCCeeCCcC-----------CCCeEEECCCCH-HhCEEEEEEEE
Confidence 455666677778899999999999999999999999998887543 223488899998 99999999999
Q ss_pred eCCCceEeeEEEEEEe
Q psy2442 90 NGVGDAVSAEASLTVY 105 (111)
Q Consensus 90 ~~~~~~~~~~~~l~~~ 105 (111)
|..|...+..+.+.|.
T Consensus 71 n~~g~~~s~~~~l~V~ 86 (91)
T 3bfo_A 71 NDRDSQDSKKVEIIID 86 (91)
T ss_dssp CSSCEEECCCEEEEEC
T ss_pred cCCCCEEeeeEEEEEe
Confidence 9988643455666654
No 24
>2bk8_A Connectin, M1, titin heart isoform N2-B; IG domain, M-BAND, structural protein, muscle, antibo; 1.69A {Homo sapiens}
Probab=99.68 E-value=8.9e-15 Score=71.86 Aligned_cols=89 Identities=19% Similarity=0.343 Sum_probs=69.7
Q ss_pred EEcCcceeeecCCcEEEEEEEecc-CCCeEEEEECCeeccCCCCceEEEeCCCCCeEEEEccCCCCCCCeEEEEEeeeCC
Q psy2442 14 TLRPRNQAVKAGGITSFYCIARGD-PIPVIQWRKNGKRVSGTQSRYMVQEFPPGGSLLRIEPVRHARDDAVYECVAENGV 92 (111)
Q Consensus 14 ~~~~~~~~~~~g~~~~l~c~~~~~-~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~g~y~c~~~~~~ 92 (111)
...+..+.+..|+.+.|.|.+.+. |.+.+.|++++..+... .++...... ....|.|.++.. .|.|.|.|.+.|..
T Consensus 5 ~~~~~~~~v~~G~~v~l~C~~~g~~p~~~v~W~~~~~~~~~~-~~~~~~~~~-~~~~L~i~~v~~-~D~G~Y~C~a~n~~ 81 (97)
T 2bk8_A 5 SGQIMHAVGEEGGHVKYVCKIENYDQSTQVTWYFGVRQLENS-EKYEITYED-GVAILYVKDITK-LDDGTYRCKVVNDY 81 (97)
T ss_dssp ECCCCCEEECTTCCEEEEEEEESCCTTCEEEEEETTEECCSS-SSEEEEEET-TEEEEEECSCCG-GGCEEEEEEEECSS
T ss_pred eccCcCEEEcCCCcEEEEEEEeccCCCCEEEEEECCEECcCC-CCEEEEEcC-CeEEEEEecCCh-hhCeEEEEEEECCC
Confidence 345566788999999999999996 88899999999988643 455543322 334699999998 99999999999999
Q ss_pred CceEeeEEEEEEec
Q psy2442 93 GDAVSAEASLTVYE 106 (111)
Q Consensus 93 ~~~~~~~~~l~~~~ 106 (111)
|.. .....|.|.+
T Consensus 82 g~~-~~~~~l~V~~ 94 (97)
T 2bk8_A 82 GED-SSYAELFVKG 94 (97)
T ss_dssp CEE-EEEEEEEETT
T ss_pred CeE-eEEEEEEEEe
Confidence 874 6677776654
No 25
>1gxe_A Myosin binding protein C, cardiac-type; cytoskeleton, muscle, IGI, thick filament, immunoglobulin domain; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.68 E-value=6.2e-16 Score=80.79 Aligned_cols=86 Identities=27% Similarity=0.444 Sum_probs=66.3
Q ss_pred CcceeeecCCcEEEEEEEeccCCCeEEEEECC----------------------------eeccCCCCceEEEeCCCCCe
Q psy2442 17 PRNQAVKAGGITSFYCIARGDPIPVIQWRKNG----------------------------KRVSGTQSRYMVQEFPPGGS 68 (111)
Q Consensus 17 ~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~~----------------------------~~~~~~~~~~~~~~~~~~~~ 68 (111)
+..+.+..|+.+.|.|.+.|.|.|.+.|++++ ..+.....++.+.... ...
T Consensus 25 p~~~~v~~G~~v~L~C~~~G~P~P~i~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~r~~i~~~~-~~s 103 (139)
T 1gxe_A 25 PDTIVVVAGNKLRLDVPISGDPAPTVIWQKAITQGNKAPARPAPDAPEDTGDSDEWVFDKKLLCETEGRVRVETTK-DRS 103 (139)
T ss_dssp CCEEEESSSSCCCCEEECCSBSCCEEEEEEECCCSCSSCCCCCCCCCCCCCCSSCCCCSCCCCCSCSSSCEEEEET-TEE
T ss_pred CCCEEEeCCCeEEEEEEEEEcCCCeEEEEECCcccccccccccccccccccccccccccceeecCCCCeEEEEeCC-CEE
Confidence 45578889999999999999999999999988 3332223455444322 334
Q ss_pred EEEEccCCCCCCCeEEEEEeeeCCCceEeeEEEEEEe
Q psy2442 69 LLRIEPVRHARDDAVYECVAENGVGDAVSAEASLTVY 105 (111)
Q Consensus 69 ~l~~~~~~~~~d~g~y~c~~~~~~~~~~~~~~~l~~~ 105 (111)
.|.|.++.. .|+|.|.|.+.|..|.. ...+.|.|.
T Consensus 104 ~L~I~~v~~-~DsG~Y~C~A~N~~G~~-~~~~~L~V~ 138 (139)
T 1gxe_A 104 IFTVEGAEK-EDEGVYTVTVKNPVGED-QVNLTVKVI 138 (139)
T ss_dssp EEECSCCCT-TTCEEEEEEEECSSCEE-EEEEEEEEC
T ss_pred EEEECCCCc-ccCEEEEEEEEeCCceE-EEEEEEEEE
Confidence 599999998 99999999999999974 777777764
No 26
>1wwb_X Protein (brain derived neurotrophic factor receptor TRKB); TRK receptor, receptor tyrosine kinase, 3D-domain swapping, transferase; 2.10A {Homo sapiens} SCOP: b.1.1.4 PDB: 1hcf_X
Probab=99.67 E-value=2.8e-15 Score=74.60 Aligned_cols=97 Identities=18% Similarity=0.233 Sum_probs=69.9
Q ss_pred ecCCCeeEEcCcceeeecCCcEEEEEEEeccCCCeEEEEECCeeccCCCCce--EEEeCC--CCCeEEEEccCCCCCCCe
Q psy2442 7 FLDPPEITLRPRNQAVKAGGITSFYCIARGDPIPVIQWRKNGKRVSGTQSRY--MVQEFP--PGGSLLRIEPVRHARDDA 82 (111)
Q Consensus 7 v~~~p~~~~~~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~~~~~~~~~~~~--~~~~~~--~~~~~l~~~~~~~~~d~g 82 (111)
|..+|.+.... ....++.+.+.|.+.|.|.|.+.|+++|..+... .+. ...... .....|.|.++.. .|+|
T Consensus 1 V~~pP~i~~~~---~~~~~~~~~~~c~v~G~P~P~i~W~k~g~~l~~~-~~~~~~~~~~~~~~~~~~L~I~~v~~-~D~G 75 (103)
T 1wwb_X 1 VHFAPTITFLE---SPTSDHHWCIPFTVKGNPKPALQWFYNGAILNES-KYICTKIHVTNHTEYHGCLQLDNPTH-MNNG 75 (103)
T ss_dssp CCCCCCCCCCC---CCCCCCEEEEEEEEECSSCCEEEEEETTEEECCC-SSEEEEEEEECSSEEEEEEEEESCCG-GGCE
T ss_pred CCCCCEEEecc---CceECcEEEEEEEEEEeCCCEEEEEECCEECCCC-CcEeEEEEecCCcEEEEEEEECCCCc-ccCE
Confidence 34566653221 1245778999999999999999999999988654 332 111111 0123389999998 9999
Q ss_pred EEEEEeeeCCCceEeeEEEEEEecCCC
Q psy2442 83 VYECVAENGVGDAVSAEASLTVYEGEE 109 (111)
Q Consensus 83 ~y~c~~~~~~~~~~~~~~~l~~~~~~~ 109 (111)
.|.|.+.|..|.. ...+.|.+...|.
T Consensus 76 ~Y~C~A~N~~G~~-~~~~~l~V~~~P~ 101 (103)
T 1wwb_X 76 DYTLIAKNEYGKD-EKQISAHFMGWPG 101 (103)
T ss_dssp EEEEEEECSSCEE-EEEEEECCSCCCC
T ss_pred EEEEEEEeCCCcE-eEEEEEEECCCCC
Confidence 9999999999985 7888888877765
No 27
>2cr6_A KIAA1556 protein, obscurin; IG-fold, immunoglobulin domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.66 E-value=7.8e-16 Score=77.97 Aligned_cols=101 Identities=18% Similarity=0.212 Sum_probs=75.0
Q ss_pred ceeEEecCCC-eeEEcCcceeeecCCcEEEEEEEeccCCCeEEEEECCeeccCCCCceEEEeCCCCCeEEEEccCCCCCC
Q psy2442 2 YRKVRFLDPP-EITLRPRNQAVKAGGITSFYCIARGDPIPVIQWRKNGKRVSGTQSRYMVQEFPPGGSLLRIEPVRHARD 80 (111)
Q Consensus 2 ~~~l~v~~~p-~~~~~~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d 80 (111)
.++|.|..+| .+...+..+.+..|+.+.|.|.+.+.|.+.+.|++++..+... .++.+...++....|.|.++.. .|
T Consensus 4 ~a~l~V~~~p~~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~g~~l~~~-~~~~~~~~~~~~~~L~I~~v~~-~D 81 (115)
T 2cr6_A 4 GSSGLVQGRRVHIIEDLEDVDVQEGSSATFRCRISPANYEPVHWFLDKTPLHAN-ELNEIDAQPGGYHVLTLRQLAL-KD 81 (115)
T ss_dssp CCCCCCCSSCCEEEECCCEEEEETTSCEECCCEEESTTCCSCEEEESSCEECCS-SSCCBCCBTTTBCCBEECSCCT-TT
T ss_pred cEEEEEcCCCCeEeccCccEEEeCCCcEEEEEEEcCCCCCccEEEECCEECCCC-CcEEEEEcCCCEEEEEEcCCCh-hh
Confidence 4677888766 6777778888999999999999999998899999999887643 3333321112334599999998 99
Q ss_pred CeEEEEEeeeCCCceEeeEEEEEEecCCC
Q psy2442 81 DAVYECVAENGVGDAVSAEASLTVYEGEE 109 (111)
Q Consensus 81 ~g~y~c~~~~~~~~~~~~~~~l~~~~~~~ 109 (111)
+|.|.|.+ |.. .....|.|..+|.
T Consensus 82 ~G~Y~C~~----g~~-~~~~~L~V~~~p~ 105 (115)
T 2cr6_A 82 SGTIYFEA----GDQ-RASAALRVTEKPS 105 (115)
T ss_dssp CEEEEEEE----TTE-ECCEEEEEECCSS
T ss_pred CEEEEEEE----CCe-eEEEEEEEECCCc
Confidence 99999994 332 5556677766553
No 28
>2edf_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.66 E-value=4.6e-15 Score=73.66 Aligned_cols=94 Identities=24% Similarity=0.323 Sum_probs=72.5
Q ss_pred CCCeeEEcCcceeeecCCcEEEEEEEeccCCCeEEEEECCeeccCCCCceEEEeCCCCCeEEEEccCCCCCCCeEEEEEe
Q psy2442 9 DPPEITLRPRNQAVKAGGITSFYCIARGDPIPVIQWRKNGKRVSGTQSRYMVQEFPPGGSLLRIEPVRHARDDAVYECVA 88 (111)
Q Consensus 9 ~~p~~~~~~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~g~y~c~~ 88 (111)
.+|.+...+..+.+..|+.+.|.|.+.+ +.+.+.|++++..+... .++.+.... ....|.|.++.. .|+|.|.|.+
T Consensus 7 ~pp~~~~~~~~~~v~~G~~v~l~C~~~~-~~~~v~W~k~g~~~~~~-~~~~~~~~~-~~~~L~I~~v~~-~D~G~Y~C~a 82 (103)
T 2edf_A 7 GPAAIIKPLEDQWVAPGEDVELRCELSR-AGTPVHWLKDRKAIRKS-QKYDVVCEG-TMAMLVIRGASL-KDAGEYTCEV 82 (103)
T ss_dssp CCCCEEECCCCEEECTTSCEEECCEESS-SSCCCCEEESSCBCCCS-SSEEEEEET-TEEEEEESSCCT-TTCSEEEEEC
T ss_pred CCcEEEecCCccEEcCCCCEEEEEEEeC-CCCcEEEEECCEEccCC-CCEEEEECC-CEEEEEECCCCc-ccCEEEEEEE
Confidence 4567777777788999999999999987 77789999999887643 455544322 334599999998 9999999999
Q ss_pred eeCCCceEeeEEEEEEecCCCCC
Q psy2442 89 ENGVGDAVSAEASLTVYEGEEKP 111 (111)
Q Consensus 89 ~~~~~~~~~~~~~l~~~~~~~~p 111 (111)
.| . ...+.|.|..+|..|
T Consensus 83 ~n----~-~~~~~l~V~~~p~~~ 100 (103)
T 2edf_A 83 EA----S-KSTASLHVEEKASGP 100 (103)
T ss_dssp SS----C-EEEEEEEECCCSSSS
T ss_pred cc----C-CcEEEEEEeCCCCCC
Confidence 88 2 556777787777654
No 29
>2e6p_A Obscurin-like protein 1; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.66 E-value=3.7e-15 Score=74.13 Aligned_cols=93 Identities=18% Similarity=0.277 Sum_probs=69.4
Q ss_pred CCeeEEcCcc---eeeecCCcEEEEEEEeccCCCeEEEEECCeeccCCCCceEEEeCCCCCeEEEEccCCCCCCCeEEEE
Q psy2442 10 PPEITLRPRN---QAVKAGGITSFYCIARGDPIPVIQWRKNGKRVSGTQSRYMVQEFPPGGSLLRIEPVRHARDDAVYEC 86 (111)
Q Consensus 10 ~p~~~~~~~~---~~~~~g~~~~l~c~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~g~y~c 86 (111)
+|.+...+.. +.+..|+.+.|.|.+.+.+.+ +.|++++..+... .++.+.... ....|.|.++.. .|+|.|.|
T Consensus 7 ~P~~~~~p~~~~~~~v~~G~~v~l~C~~~~~p~~-v~W~k~g~~~~~~-~~~~~~~~~-~~~~L~I~~~~~-~D~G~Y~C 82 (104)
T 2e6p_A 7 GPVHILSPQDKVSLTFTTSERVVLTCELSRVDFP-ATWYKDGQKVEES-ELLVVKMDG-RKHRLILPEAKV-QDSGEFEC 82 (104)
T ss_dssp SSCCCCBCCSCEEEEEESSSCEECCEECSSTTCC-CEEEETTEECCCB-TTBEEEEET-TEEEEEESSCCT-TTCEEEEE
T ss_pred CCCEEECCCCCccEEEeCCCcEEEEEEecCCCCc-cEEeeCCEECCCC-CCEEEEeCC-CEEEEEECCCCh-hhCEEEEE
Confidence 4555555555 678899999999999998888 9999999988643 455444311 335699999998 99999999
Q ss_pred EeeeCCCceEeeEEEEEEecCCCCC
Q psy2442 87 VAENGVGDAVSAEASLTVYEGEEKP 111 (111)
Q Consensus 87 ~~~~~~~~~~~~~~~l~~~~~~~~p 111 (111)
.+.|..+ .+.|.|.++|.+|
T Consensus 83 ~a~n~~~-----~~~l~V~~~P~pp 102 (104)
T 2e6p_A 83 RTEGVSA-----FFGVTVQDPSGPS 102 (104)
T ss_dssp ECSSCCC-----CEEEEEECCCCSS
T ss_pred EECCceE-----EEEEEEcCCCCCc
Confidence 9988643 3556677777654
No 30
>3m45_A Cell adhesion molecule 2; IG fold, dimer, disulfide bond, glycoprotein, immunoglobulin membrane, transmembrane; HET: NAG; 2.21A {Mus musculus}
Probab=99.66 E-value=8.7e-15 Score=73.03 Aligned_cols=99 Identities=16% Similarity=0.175 Sum_probs=70.8
Q ss_pred ecCCCeeEEcCcceeeecCCcEEEEEEEeccCCCeEEEEECCe-ecc------CCCCceEEEeCCCCCeEEEEccCCCCC
Q psy2442 7 FLDPPEITLRPRNQAVKAGGITSFYCIARGDPIPVIQWRKNGK-RVS------GTQSRYMVQEFPPGGSLLRIEPVRHAR 79 (111)
Q Consensus 7 v~~~p~~~~~~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~~~-~~~------~~~~~~~~~~~~~~~~~l~~~~~~~~~ 79 (111)
|..+|.+...+..+.+..|++++|.|...+.+.+.+.|++.+. .+. ....++...........|.|.++.. .
T Consensus 3 v~~~p~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~-~ 81 (108)
T 3m45_A 3 VKGSQGQFPLTQNVTVVEGGTAILTCRVDQNDNTSLQWSNPAQQTLYFDDKKALRDNRIELVRASWHELSISVSDVSL-S 81 (108)
T ss_dssp -----CCCEECCCEEEETTSCEEEEEEESSCSSCCEEEECTTCCEEEETTEECSCCTTEEEEEESSSEEEEEECSCCG-G
T ss_pred cccCCCccccCCeeEEEeCCcEEEEeEEcCCCccEEEEEcCCCceEEEcCCcccccCcEEEeecCCCcEEEEECCCCh-h
Confidence 3455666667778899999999999999998888999998765 111 1123555443222345599999998 9
Q ss_pred CCeEEEEEeeeCCCceEeeEEEEEEecCC
Q psy2442 80 DDAVYECVAENGVGDAVSAEASLTVYEGE 108 (111)
Q Consensus 80 d~g~y~c~~~~~~~~~~~~~~~l~~~~~~ 108 (111)
|+|.|.|.+.| .+. ......|.|..+|
T Consensus 82 D~G~Y~C~~~n-~~~-~~~~~~L~V~~~P 108 (108)
T 3m45_A 82 DEGQYTCSLFT-MPV-KTSKAYLTVLGVP 108 (108)
T ss_dssp GCEEEEEEECS-SSC-EEEEEEEEEECCC
T ss_pred HCeEEEEEEEc-CCC-cEEEEEEEEEcCC
Confidence 99999999999 665 3777888887764
No 31
>2ckn_A Basic fibroblast growth factor receptor 1; kinase, transferase, heparin-binding, nucleotide-binding, immunoglobulin domain, alternatice splicing; NMR {Mus musculus}
Probab=99.65 E-value=2.5e-15 Score=73.69 Aligned_cols=86 Identities=21% Similarity=0.426 Sum_probs=67.4
Q ss_pred CCeeEEcCcceeeecCCcEEEEEEEeccCCCeEEEEECCeeccCCCCceEEEeCCCCCeEEEEccCCCCCCCeEEEEEee
Q psy2442 10 PPEITLRPRNQAVKAGGITSFYCIARGDPIPVIQWRKNGKRVSGTQSRYMVQEFPPGGSLLRIEPVRHARDDAVYECVAE 89 (111)
Q Consensus 10 ~p~~~~~~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~g~y~c~~~ 89 (111)
+|.+...+..+.+..|+.+.|.|.+.+.+ +.+.|++++..+... .++.. ....|.|.++.. .|+|.|.|.+.
T Consensus 9 pp~~~~~~~~~~v~~G~~v~l~C~~~g~p-p~i~W~k~g~~~~~~-~~~~~-----~~~~L~i~~~~~-~D~G~Y~C~a~ 80 (95)
T 2ckn_A 9 PWGVPVEVESLLVHPGDLLQLRCRLRDDV-QSINWLRDGVQLVES-NRTRI-----TGEEVEVRDSIP-ADSGLYACVTS 80 (95)
T ss_dssp SCCBTTBBCCEEECTTSCEEEECCEESSC-CEEEEEBTTBCCCCC-SSEEE-----CSSEEEESSCCG-GGSEEEEEEEE
T ss_pred CCEEEcCcceEEEcCCCeEEEEEECCCCC-CceEEEECCEecCCC-CCEEE-----eCCEEEECCCCh-HHCEEEEEEec
Confidence 45555556667889999999999999887 799999998877643 45444 234599999998 99999999999
Q ss_pred eCCCceEeeEEEEEE
Q psy2442 90 NGVGDAVSAEASLTV 104 (111)
Q Consensus 90 ~~~~~~~~~~~~l~~ 104 (111)
|..|.. ...+.+.|
T Consensus 81 n~~g~~-~~~~~l~V 94 (95)
T 2ckn_A 81 SPSGSD-TTYFSVNV 94 (95)
T ss_dssp ETTEEE-EEEEEEEE
T ss_pred cCCCcE-EEEEEEEE
Confidence 988864 66666654
No 32
>3mtr_A N-CAM-1, NCAM-1, neural cell adhesion molecule 1; immunoglobulin domain, fibronectin type III repeat, CE adhesion; 1.80A {Homo sapiens}
Probab=99.65 E-value=1.5e-14 Score=80.20 Aligned_cols=98 Identities=23% Similarity=0.406 Sum_probs=77.4
Q ss_pred CCeeEEcCcceeeecCCcEEEEEEEeccCCCeEEEEECCeeccCCC-CceEEEeCCCCCeEEEEccCCCCCCCeEEEEEe
Q psy2442 10 PPEITLRPRNQAVKAGGITSFYCIARGDPIPVIQWRKNGKRVSGTQ-SRYMVQEFPPGGSLLRIEPVRHARDDAVYECVA 88 (111)
Q Consensus 10 ~p~~~~~~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~d~g~y~c~~ 88 (111)
+|.+ ..+..+.+..|+.+.|.|.+.+.|.+.+.|++++..+.... .++.+.... ....|.|.++.. .|.|.|.|.+
T Consensus 19 ~P~~-~~p~~~~~~~G~~v~l~C~~~g~p~p~i~W~~~g~~l~~~~~~~~~~~~~~-~~~~L~i~~~~~-~d~G~Y~C~a 95 (215)
T 3mtr_A 19 APKL-QGPVAVYTWEGNQVNITCEVFAYPSATISWFRDGQLLPSSNYSNIKIYNTP-SASYLEVTPDSE-NDFGNYNCTA 95 (215)
T ss_dssp EEEE-ECCSEEEECTTCCEEEEEEEEEESCCEEEEEETTEESSCSSSCSEEEEEET-TEEEEEECCCSG-GGCEEEEEEE
T ss_pred CCcc-cCCceEEEECCCCEEEEEEEeecCCCEEEEEECCeECCCCCCccEEEecCC-CeeEEEEecCCh-hhCeEEEEEE
Confidence 4555 45666788899999999999999999999999999886442 344444322 346699999998 9999999999
Q ss_pred eeCCCceEeeEEEEEEecCCCCC
Q psy2442 89 ENGVGDAVSAEASLTVYEGEEKP 111 (111)
Q Consensus 89 ~~~~~~~~~~~~~l~~~~~~~~p 111 (111)
.|..|.. ...+.+.+..+|..|
T Consensus 96 ~n~~g~~-~~~~~l~v~~~P~~p 117 (215)
T 3mtr_A 96 VNRIGQE-SLEFILVQADTPSSP 117 (215)
T ss_dssp ECSSCEE-EEEEEEEECCCCCCC
T ss_pred EECCCce-EEEEEEEECCCCCCC
Confidence 9999875 777888887777665
No 33
>1x44_A Myosin-binding protein C, SLOW-type; IG-like domain, SLOW- type/skeletal muscle SLOW-isoform, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.64 E-value=1.6e-14 Score=71.74 Aligned_cols=90 Identities=20% Similarity=0.279 Sum_probs=67.9
Q ss_pred eEEcCcceeeecCCcEEEEEEEeccCCCeEEEEECCeeccCCCC-ceEEEeCCCCCeEEEEccCCCCCCCeEEEEEeeeC
Q psy2442 13 ITLRPRNQAVKAGGITSFYCIARGDPIPVIQWRKNGKRVSGTQS-RYMVQEFPPGGSLLRIEPVRHARDDAVYECVAENG 91 (111)
Q Consensus 13 ~~~~~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~d~g~y~c~~~~~ 91 (111)
+...+..+.+..|+.+.|.|.+.+ +.+.+.|++++..+..... ++.+.... ....|.|.++.. .|+|.|.|.+.|
T Consensus 10 ~~~~~~~~~v~~G~~v~l~C~~~~-~~~~v~W~k~g~~l~~~~~~~~~~~~~~-~~~~L~I~~~~~-~D~G~Y~C~a~n- 85 (103)
T 1x44_A 10 VTKQLEDTTAYCGERVELECEVSE-DDANVKWFKNGEEIIPGPKSRYRIRVEG-KKHILIIEGATK-ADAAEYSVMTTG- 85 (103)
T ss_dssp CSBCCCCEEEETTEEEEEEEECSS-SSCCCEEEETTEECCCSTTCSEEEEEET-TEEEEEEEEECT-TTCSEEEEEETT-
T ss_pred eeccCCCEEEECCCCEEEEEEecC-CCCeEEEEECCEECCCCCceEEEEEEcC-CEEEEEECCCCc-ccCEEEEEEECC-
Confidence 555666778899999999999977 6689999999998865421 44554322 335699999998 999999999977
Q ss_pred CCceEeeEEEEEEecCCCC
Q psy2442 92 VGDAVSAEASLTVYEGEEK 110 (111)
Q Consensus 92 ~~~~~~~~~~l~~~~~~~~ 110 (111)
. .....|.|..+|.+
T Consensus 86 ---~-~~~~~l~V~~~p~p 100 (103)
T 1x44_A 86 ---G-QSSAKLSVDLKSGP 100 (103)
T ss_dssp ---E-EEEEEEEEECCCSC
T ss_pred ---C-cEEEEEEEeCCCCC
Confidence 2 55667777776654
No 34
>1waa_A Titin; metal binding protein, calmodulin-binding, cytoskeleton, immunoglobulin domain, muscle protein, phosphorylation, repeat; 1.80A {Homo sapiens} PDB: 1waa_E 1waa_F 1tit_A 1tiu_A 2rq8_A
Probab=99.63 E-value=3.8e-14 Score=69.29 Aligned_cols=79 Identities=15% Similarity=0.086 Sum_probs=62.3
Q ss_pred CCCeeEEcCcceeeecCCcEEEEEEEeccCCCeEEEEECCeeccCCCCceEEEeCCCCCeEEEEccCCCCCCCeEEEEEe
Q psy2442 9 DPPEITLRPRNQAVKAGGITSFYCIARGDPIPVIQWRKNGKRVSGTQSRYMVQEFPPGGSLLRIEPVRHARDDAVYECVA 88 (111)
Q Consensus 9 ~~p~~~~~~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~g~y~c~~ 88 (111)
.++.+...+..+.+..|+++.|.|.+.+ +.+.+.|+++|..+... .++.+.... ....|.|.++.. .|+|.|.|.+
T Consensus 4 ~~~~~~~~~~~~~v~~G~~v~l~C~v~~-~~~~v~W~k~g~~i~~~-~~~~i~~~g-~~~~L~I~~v~~-~D~G~Y~C~a 79 (93)
T 1waa_A 4 ALIEVEKPLYGVEVFVGETAHFEIELSE-PDVHGQWKLKGQPLAAS-PDCEIIEDG-KKHILILHNCQL-GMTGEVSFQA 79 (93)
T ss_dssp CCCCEEECCCCEEEETTSCEEEEEEESS-SSCCCEEEETTEECCCB-TTEEEEEET-TEEEEEECSCCG-GGCEEEEEEE
T ss_pred CCcEeeccCcceEEeCCCCEEEEEEECC-CCCeEEEEECCEECcCC-CCEEEEEEC-CEEEEEECCCCh-hhCEEEEEEE
Confidence 3567777788889999999999999976 44689999999988644 555554311 334699999998 9999999999
Q ss_pred eeC
Q psy2442 89 ENG 91 (111)
Q Consensus 89 ~~~ 91 (111)
.|.
T Consensus 80 ~n~ 82 (93)
T 1waa_A 80 ANT 82 (93)
T ss_dssp TTE
T ss_pred CCC
Confidence 773
No 35
>2yd1_A Tyrosine-protein phosphatase LAR; hydrolase; 1.80A {Drosophila melanogaster} PDB: 3pxj_A
Probab=99.63 E-value=1.9e-14 Score=79.57 Aligned_cols=101 Identities=33% Similarity=0.554 Sum_probs=76.1
Q ss_pred eeEEecCC-------CeeEEcCcceeeecCCcEEEEEEEeccCCCeEEEEECCeeccCCCCceEEEeCCCCCeEEEEccC
Q psy2442 3 RKVRFLDP-------PEITLRPRNQAVKAGGITSFYCIARGDPIPVIQWRKNGKRVSGTQSRYMVQEFPPGGSLLRIEPV 75 (111)
Q Consensus 3 ~~l~v~~~-------p~~~~~~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 75 (111)
+.|.|... |.+...+....+..|+.+.|.|.+.+.|.+.+.|++++..+.....++... ...|.|..+
T Consensus 96 ~~l~V~~~~~~~~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~-----~~~L~i~~v 170 (212)
T 2yd1_A 96 ATLTIYEGDKTPAGFPVITQGPGTRVIEVGHTVLMTCKAIGNPTPNIYWIKNQTKVDMSNPRYSLK-----DGFLQIENS 170 (212)
T ss_dssp EEEEEECTTCSCTTCCEEEECCCCEEEETTCCEEECCEEECSSCCEEEEEETTEECCTTSTTEEEE-----TTEEEECSC
T ss_pred EEEEEecccCCCCCCCeeEeCCCceEeecCCeEEEEEEeccCCCCeEEEEECCeEcccCCCeEEcc-----CCeEEEccC
Confidence 35566554 667667766778889999999999999999999999999886544455432 235999999
Q ss_pred CCCCCCeEEEEEeeeCCCceEeeEEEEEEecCCC
Q psy2442 76 RHARDDAVYECVAENGVGDAVSAEASLTVYEGEE 109 (111)
Q Consensus 76 ~~~~d~g~y~c~~~~~~~~~~~~~~~l~~~~~~~ 109 (111)
.. .|.|.|.|.+.|..|......+.|.|.+...
T Consensus 171 ~~-~d~G~Y~C~a~N~~G~~~s~~~~l~V~~~~~ 203 (212)
T 2yd1_A 171 RE-EDQGKYECVAENSMGTEHSKATNLYVKVRRV 203 (212)
T ss_dssp CG-GGCEEEEEEEEETTEEEECCCEEEEEEC---
T ss_pred Ch-hhCEEEEEEeecCCCceeEEEEEEEEEeccc
Confidence 98 9999999999999987533346777766543
No 36
>2edh_A Obscurin; structural genomics, NPPSFA, national project on P structural and functional analyses, riken structural genomics/proteomics initiative; NMR {Homo sapiens}
Probab=99.63 E-value=4.7e-14 Score=71.10 Aligned_cols=97 Identities=19% Similarity=0.236 Sum_probs=73.3
Q ss_pred eeEEecCC-CeeEEcCcceeeecCCcEEEEEEEeccCCCeEEEEECCeeccCCCCceEEEeCCCCCeEEEEccCCCCCCC
Q psy2442 3 RKVRFLDP-PEITLRPRNQAVKAGGITSFYCIARGDPIPVIQWRKNGKRVSGTQSRYMVQEFPPGGSLLRIEPVRHARDD 81 (111)
Q Consensus 3 ~~l~v~~~-p~~~~~~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~ 81 (111)
+.|.|... |.+...+....+..|+.+.|.|.+.+. +.+.|++++..+... .++.+.... ....|.|.++.. .|+
T Consensus 11 ~~l~V~~~pp~~~~~~~~~~v~~G~~v~l~C~~~~~--p~v~W~k~~~~l~~~-~~~~~~~~~-~~~~L~I~~v~~-~D~ 85 (113)
T 2edh_A 11 AMLTVRALPIKFTEGLRNEEATEGATAVLRCELSKM--APVEWWKGHETLRDG-DRHSLRQDG-ARCELQIRGLVA-EDA 85 (113)
T ss_dssp CCCCCCCSCCCEEECCCCCEECTTSCEEEEEEESSC--CCCEEEESSSBCCCS-SSEEEEEET-TEEEEEECSCCS-TTC
T ss_pred EEEEEEcCCCcccccCCceEEeCCCeEEEEEEECCC--CcEEEEECCEECCCC-CcEEEEECC-CEEEEEECCCCh-hhC
Confidence 45677744 577777778889999999999999764 689999999887643 566554321 334599999998 999
Q ss_pred eEEEEEeeeCCCceEeeEEEEEEecCCC
Q psy2442 82 AVYECVAENGVGDAVSAEASLTVYEGEE 109 (111)
Q Consensus 82 g~y~c~~~~~~~~~~~~~~~l~~~~~~~ 109 (111)
|.|.|.+ +. ......|.|..+|.
T Consensus 86 G~Y~C~a----~~-~~~~~~l~V~~~p~ 108 (113)
T 2edh_A 86 GEYLCMC----GK-ERTSAMLTVRAMPS 108 (113)
T ss_dssp EEEEEEE----TT-EEEEEEEEECCCCC
T ss_pred EEEEEEe----CC-CCEEEEEEEeCCCC
Confidence 9999998 44 36677788877664
No 37
>2j8h_A Titin, connectin; cardiomyopathy, nuclear protein, serine/threonine-protein KI LIMB-girdle muscular dystrophy, phosphorylation; 1.99A {Homo sapiens} PDB: 2j8o_A 2ill_A
Probab=99.62 E-value=4.3e-14 Score=77.12 Aligned_cols=96 Identities=31% Similarity=0.492 Sum_probs=75.6
Q ss_pred CCCeeEEcCcceeeecCCcEEEEEEEeccCCCeEEEEECCeeccCCCCceEEEeCCCCCeEEEEccCCCCCCCeEEEEEe
Q psy2442 9 DPPEITLRPRNQAVKAGGITSFYCIARGDPIPVIQWRKNGKRVSGTQSRYMVQEFPPGGSLLRIEPVRHARDDAVYECVA 88 (111)
Q Consensus 9 ~~p~~~~~~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~g~y~c~~ 88 (111)
.+|.+...+..+.+..|+.+.|.|.+.+.|.+.+.|++++..+.....++...........|.|.++.. .|.|.|.|.+
T Consensus 3 ~~P~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~-~d~G~Y~C~~ 81 (197)
T 2j8h_A 3 MAPHFKEELRNLNVRYQSNATLVCKVTGHPKPIVKWYRQGKEIIADGLKYRIQEFKGGYHQLIIASVTD-DDATVYQVRA 81 (197)
T ss_dssp CCCEEEECCCCEEEETTSCEEEEEEEECSSCCEEEEEETTEECCCCSSSEEEEEETTTEEEEEECSCCG-GGCSEEEEEE
T ss_pred CCCEEEEcCCccEEcCCCEEEEEEEEeecCCCEEEEEECCEECccCCCcEEEEEcCCCEEEEEECcCCH-HhCEEEEEEE
Confidence 468888888888899999999999999988899999999998865445555543332334699999998 9999999999
Q ss_pred eeCCCceEeeEEEEEEec
Q psy2442 89 ENGVGDAVSAEASLTVYE 106 (111)
Q Consensus 89 ~~~~~~~~~~~~~l~~~~ 106 (111)
.|..|.. ...+.|.+..
T Consensus 82 ~n~~g~~-~~~~~l~V~~ 98 (197)
T 2j8h_A 82 TNQGGSV-SGTASLEVEV 98 (197)
T ss_dssp EETTEEE-EEEEEEEEEE
T ss_pred EECCCce-eEEEEEEEcC
Confidence 9987653 5666666543
No 38
>2wv3_A Neuroplastin; igcam, membrane, glycoprotein, cell membrane, cell adhesion, transmembrane, disulfide bond, alternative splicing; HET: NAG; 1.95A {Rattus norvegicus}
Probab=99.62 E-value=2.4e-13 Score=73.91 Aligned_cols=100 Identities=29% Similarity=0.460 Sum_probs=77.8
Q ss_pred eeEEecCCCeeEEcCcceeeecCCcEEEEEEEeccCCCeEEEEE--CCeeccC--CCCceEEEeCCCCCeEEEEccCC-C
Q psy2442 3 RKVRFLDPPEITLRPRNQAVKAGGITSFYCIARGDPIPVIQWRK--NGKRVSG--TQSRYMVQEFPPGGSLLRIEPVR-H 77 (111)
Q Consensus 3 ~~l~v~~~p~~~~~~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~--~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~-~ 77 (111)
+.|.|..+|.+...+....+..|+.+.|.|.+.+.|.+.+.|++ ++..+.. ...++...... ....|.+.++. .
T Consensus 85 ~~l~V~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~g~~~~~~~~~~~~~~~~~~-~~~~L~i~~~~~~ 163 (190)
T 2wv3_A 85 ATIEVKAAPDITGHKRSENKNEGQDAMMYCKSVGYPHPEWMWRKKENGVFEEISNSSGRFFIINKE-NYTELNIVNLQIT 163 (190)
T ss_dssp EEEEEECCCEEEEECSEEEEETTSCEEEEEEEECSSCCEEEEEEEETTEEEECCCTTSCEEEEECS-SEEEEEECSCCTT
T ss_pred EEEEEecCCcccccCCcceeeCCCcEEEEEEeCccCCCceEEEEcCCCceeeeecCCCeEEEecCC-CeeEEEEEecccc
Confidence 56788889998877777788999999999999999999999999 6766532 23455554322 33469999998 8
Q ss_pred CCCCeEEEEEeeeCCCceEeeEEEEEEe
Q psy2442 78 ARDDAVYECVAENGVGDAVSAEASLTVY 105 (111)
Q Consensus 78 ~~d~g~y~c~~~~~~~~~~~~~~~l~~~ 105 (111)
.|.|.|.|.+.|..|.. ...+.|.|.
T Consensus 164 -~d~G~Y~C~a~N~~g~~-~~~~~l~V~ 189 (190)
T 2wv3_A 164 -EDPGEYECNATNSIGSA-SVSTVLRVR 189 (190)
T ss_dssp -TSCEEEEEEEECSSCEE-EEEEEEEEE
T ss_pred -CCCEEEEEEEEecCCcc-eeEEEEEEE
Confidence 99999999999999874 666666553
No 39
>2dku_A KIAA1556 protein; beta-sandwich, IG-fold, obscurin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.61 E-value=3.6e-14 Score=70.40 Aligned_cols=93 Identities=23% Similarity=0.337 Sum_probs=69.9
Q ss_pred CCeeEEcCcceeeecCCcEEEEEEEeccCCCeEEEEECCeeccCCCCceEEEeCCCCCeEEEEccCCCCCCCeEEEEEee
Q psy2442 10 PPEITLRPRNQAVKAGGITSFYCIARGDPIPVIQWRKNGKRVSGTQSRYMVQEFPPGGSLLRIEPVRHARDDAVYECVAE 89 (111)
Q Consensus 10 ~p~~~~~~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~g~y~c~~~ 89 (111)
+|.+...+..+.+..|+.+.|.|. .+.+.+.+.|++++..+... .++.+.... ....|.|.++.. .|+|.|.|.
T Consensus 8 pp~~~~~~~~~~v~~G~~v~l~C~-~~~p~~~v~W~k~~~~l~~~-~~~~~~~~~-~~~~L~I~~v~~-~D~G~Y~C~-- 81 (103)
T 2dku_A 8 ANCFTEELTNLQVEEKGTAVFTCK-TEHPAATVTWRKGLLELRAS-GKHQPSQEG-LTLRLTISALEK-ADSDTYTCD-- 81 (103)
T ss_dssp CCCCSSCCCCEEEETTSEEEEEEE-CSSCCSCCEEEESSCBCCSS-SSEEEEEET-TEEEEEEESCCT-TTCSEEEEE--
T ss_pred CCEeEecCCcEEEeCCCcEEEEEE-eCCCCCeEEEEeCCEECCCC-CeEEEEeCC-CEEEEEECCCCc-ccCEEEEEE--
Confidence 556666667788999999999999 57788899999999887644 455554211 334599999998 999999998
Q ss_pred eCCCceEeeEEEEEEecCCCCC
Q psy2442 90 NGVGDAVSAEASLTVYEGEEKP 111 (111)
Q Consensus 90 ~~~~~~~~~~~~l~~~~~~~~p 111 (111)
.|.. .....|.|.+.|.+|
T Consensus 82 --~g~~-~~~~~l~V~~~p~~p 100 (103)
T 2dku_A 82 --IGQA-QSRAQLLVQGRRSGP 100 (103)
T ss_dssp --CSSC-BCCEEEEEECSCCCC
T ss_pred --eCCc-eEEEEEEEeCccCCC
Confidence 3443 556778888777665
No 40
>2iep_A Muscle-specific kinase receptor; beta-sandwich, signaling protein,transferase; 2.21A {Rattus norvegicus}
Probab=99.61 E-value=1.5e-14 Score=78.62 Aligned_cols=100 Identities=30% Similarity=0.433 Sum_probs=76.9
Q ss_pred eeEEecCCCeeEEcCcceeeecCCcEEEEEEEeccCCCeEEEEECCeeccCCCCceEEEeCCCCCeEEEEccCCCCCCCe
Q psy2442 3 RKVRFLDPPEITLRPRNQAVKAGGITSFYCIARGDPIPVIQWRKNGKRVSGTQSRYMVQEFPPGGSLLRIEPVRHARDDA 82 (111)
Q Consensus 3 ~~l~v~~~p~~~~~~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~g 82 (111)
..|.|..+|.+...+....+..|+.+.|.|.+.+.|.+.+.|++++..+... .++... ....|.+..+.. .|.|
T Consensus 93 ~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~-~~~~~~----~~~~L~i~~~~~-~d~G 166 (192)
T 2iep_A 93 GALQVKMKPKITRPPINVKIIEGLKAVLPCTTMGNPKPSVSWIKGDSALREN-SRIAVL----ESGSLRIHNVQK-EDAG 166 (192)
T ss_dssp EEEEEEEEEEEEECCCCEEEETTSCEEECCEEEEESCCEEEEEETTEECCCC-SSEEEC----TTSCEEESSCCG-GGCE
T ss_pred EEEEEEeCCccccCCcceEEeCCCcEEEEEEEeccCCceEEEEeCCEEccCC-CcEEEe----cCCcEEEecCCh-hhCE
Confidence 3566777777777777778889999999999999999999999999987643 344332 233489999998 9999
Q ss_pred EEEEEeeeCCCceEeeEEEEEEecCC
Q psy2442 83 VYECVAENGVGDAVSAEASLTVYEGE 108 (111)
Q Consensus 83 ~y~c~~~~~~~~~~~~~~~l~~~~~~ 108 (111)
.|.|.+.|..|......+.|.|..+|
T Consensus 167 ~Y~C~a~n~~g~~~s~~~~l~V~~pp 192 (192)
T 2iep_A 167 QYRCVAKNSLGTAYSKLVKLEVEVFA 192 (192)
T ss_dssp EEEEEEEETTEEEECCCEEEEEEC--
T ss_pred EEEEEEEcCCCcEEEEEEEEEEEeCC
Confidence 99999999988653456777776654
No 41
>2dav_A SLOW MYBP-C, myosin-binding protein C, SLOW-type; IG domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.61 E-value=2.4e-14 Score=73.42 Aligned_cols=98 Identities=18% Similarity=0.191 Sum_probs=69.5
Q ss_pred eeEEcCcceeeecCCcEEEEEEEecc---CCCeEEEEECCeec-c-CCCCceEEEeC-CC----CCeEEEEccCCCCCCC
Q psy2442 12 EITLRPRNQAVKAGGITSFYCIARGD---PIPVIQWRKNGKRV-S-GTQSRYMVQEF-PP----GGSLLRIEPVRHARDD 81 (111)
Q Consensus 12 ~~~~~~~~~~~~~g~~~~l~c~~~~~---~~~~~~w~~~~~~~-~-~~~~~~~~~~~-~~----~~~~l~~~~~~~~~d~ 81 (111)
.+...+..+.+.+|+.++|.|.+.+. |.|.+.|+++.... . ....++.+... +. ....|.|.++.. .|+
T Consensus 9 ~F~~~P~~v~V~eG~~v~L~C~v~g~~~~p~P~V~W~Kgk~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~-~Da 87 (126)
T 2dav_A 9 LFIEKPQGGTVKVGEDITFIAKVKAEDLLRKPTIKWFKGKWMDLASKAGKHLQLKETFERHSRVYTFEMQIIKAKD-NFA 87 (126)
T ss_dssp SCCSCCCCCEEETTCCEEEEEEEECCCSSSCCEEEEEESSSCCHHHHTTSSEEEEEEEETTTTEEEEEEEECSCCT-TSC
T ss_pred EEEEcCCCeEEeCCCCEEEEEEEeccCCCCCCcEEEeeCcCcccCCCCCceEEEccccccccccceEEEEEccCCc-ccC
Confidence 35556777889999999999998775 78899999964211 0 01123333210 00 124599999998 999
Q ss_pred eEEEEEeeeCCCceEeeEEEEEEec-CCCCC
Q psy2442 82 AVYECVAENGVGDAVSAEASLTVYE-GEEKP 111 (111)
Q Consensus 82 g~y~c~~~~~~~~~~~~~~~l~~~~-~~~~p 111 (111)
|.|.|.+.|..+. .++.+.|.|.. ++..|
T Consensus 88 G~Y~Cevsn~~g~-~~~~~~L~V~~~~~~~p 117 (126)
T 2dav_A 88 GNYRCEVTYKDKF-DSCSFDLEVHESTGTTP 117 (126)
T ss_dssp EEEEEEEECSSCE-EEECCEEEEECCCCSCC
T ss_pred EEEEEEEEeCCCc-EEEEEEEEEEecCCCCC
Confidence 9999999999876 48888999888 66544
No 42
>2cr3_A Basic fibroblast growth factor receptor 1; IG fold, FGFR1, BFGF-R, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.61 E-value=1.1e-14 Score=71.84 Aligned_cols=85 Identities=20% Similarity=0.408 Sum_probs=66.4
Q ss_pred cCcceeeecCCcEEEEEEEeccCCCeEEEEECCeeccCCCCceEEEeCCCCCeEEEEccCCCCCCCeEEEEEeeeCCCce
Q psy2442 16 RPRNQAVKAGGITSFYCIARGDPIPVIQWRKNGKRVSGTQSRYMVQEFPPGGSLLRIEPVRHARDDAVYECVAENGVGDA 95 (111)
Q Consensus 16 ~~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~g~y~c~~~~~~~~~ 95 (111)
.+..+.+..|+.+.|.|.+.+.+ +.+.|++++..+... .++.+ ....|.|..+.. .|.|.|.|.+.|..|..
T Consensus 9 ~p~~~~v~~G~~v~L~C~~~g~p-p~i~W~k~g~~~~~~-~~~~~-----~~~~L~i~~v~~-~D~G~Y~C~a~n~~g~~ 80 (99)
T 2cr3_A 9 EVESFLVHPGDLLQLRCRLRDDV-QSINWLRDGVQLAES-NRTRI-----TGEEVEVQDSVP-ADSGLYACVTSSPSGSD 80 (99)
T ss_dssp CEEECCBCTTSCEEEECCCCSSC-CEEEEEESSSBCCCC-SSEEE-----CSSEEEETTCCT-TTCEEEEEEEEETTEEE
T ss_pred CCcCeEEeCCCcEEEEEEecCCC-CeEEEEECCEECCCC-CcEEE-----ECCEEEEccCCH-HHCEEEEEEEEeCCceE
Confidence 34456788999999999998876 699999999877543 34443 234599999998 99999999999998874
Q ss_pred EeeEEEEEEecCCC
Q psy2442 96 VSAEASLTVYEGEE 109 (111)
Q Consensus 96 ~~~~~~l~~~~~~~ 109 (111)
...+.+.|...+.
T Consensus 81 -~~~~~l~V~~~~~ 93 (99)
T 2cr3_A 81 -TTYFSVNVSDALP 93 (99)
T ss_dssp -EEEEEECBCSCCS
T ss_pred -EEEEEEEEecCCC
Confidence 7777777766554
No 43
>1wwc_A Protein (NT-3 growth factor receptor TRKC); TRK receptor, receptor tyrosine kinase, 3D-domain swapping, transferase; 1.90A {Homo sapiens} SCOP: b.1.1.4
Probab=99.61 E-value=2.4e-14 Score=72.68 Aligned_cols=99 Identities=17% Similarity=0.297 Sum_probs=69.2
Q ss_pred eEEecCCCeeEEcCcceeeecCCcEEEEEEEeccCCCeEEEEECCeeccCCCCceEEEeCC---CCCeEEEEccCCCCCC
Q psy2442 4 KVRFLDPPEITLRPRNQAVKAGGITSFYCIARGDPIPVIQWRKNGKRVSGTQSRYMVQEFP---PGGSLLRIEPVRHARD 80 (111)
Q Consensus 4 ~l~v~~~p~~~~~~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~---~~~~~l~~~~~~~~~d 80 (111)
+|.|..+|.+...... . ......+.|.+.|.|.+.+.|+++|..+... .+....... .....|.+.++.. .|
T Consensus 2 ~L~V~~pP~i~~~~~~-~--~~~~~~l~C~~~g~P~p~i~W~k~g~~l~~~-~~~~~~~~~~~~~~~~~L~i~~~~~-~d 76 (118)
T 1wwc_A 2 ALTVYYPPRVVSLEEP-E--LRLEHCIEFVVRGNPPPTLHWLHNGQPLRES-KIIHVEYYQEGEISEGCLLFNKPTH-YN 76 (118)
T ss_dssp --CCCCCCCCCCCCCC-C--CCCEEEEEEEEECSSCCEEEEEETTEECCCS-SSEEEEEEECSSEEEEEEEEESCCG-GG
T ss_pred EEEEecCCceeccCCC-e--eccceEEEEEeeeeCCCeEEEEECCEECCCC-CceeEEEeccCccccEEEEECCCCh-hc
Confidence 5778888887544322 2 2356788899999999999999999988654 322221100 0134588999998 99
Q ss_pred CeEEEEEeeeCCCceEeeEEEEEEecCC
Q psy2442 81 DAVYECVAENGVGDAVSAEASLTVYEGE 108 (111)
Q Consensus 81 ~g~y~c~~~~~~~~~~~~~~~l~~~~~~ 108 (111)
+|.|.|.+.|..|.. ...+.+.+...|
T Consensus 77 ~G~Y~C~a~N~~G~~-~~~~~l~v~~~P 103 (118)
T 1wwc_A 77 NGNYTLIAKNPLGTA-NQTINGHFLKEP 103 (118)
T ss_dssp CEEEEEEEEETTEEE-EEEEEECCSCCC
T ss_pred CEEEEEEEECCCCeE-eeEEEEEEccCC
Confidence 999999999999874 777777665554
No 44
>2yd6_A PTPRD protein; hydrolase; HET: FLC; 1.35A {Homo sapiens} PDB: 2yd7_A 2yd2_A 2yd3_A 2yd4_A* 2yd8_A* 2yd5_A* 3pxh_A
Probab=99.61 E-value=9.1e-14 Score=76.85 Aligned_cols=96 Identities=31% Similarity=0.458 Sum_probs=70.9
Q ss_pred CeeEEcCcceeeecCCcEEEEEEEeccCCCeEEEEECCeeccCC--CCceEEEeCCCCCeEEEEccCCCCCCCeEEEEEe
Q psy2442 11 PEITLRPRNQAVKAGGITSFYCIARGDPIPVIQWRKNGKRVSGT--QSRYMVQEFPPGGSLLRIEPVRHARDDAVYECVA 88 (111)
Q Consensus 11 p~~~~~~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~d~g~y~c~~ 88 (111)
|.+...+....+..|+.+.|.|.+.+.|.+.+.|++++..+... ..++...... ....|.|..+.. .|.|.|.|.+
T Consensus 109 p~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~v~W~~~g~~l~~~~~~~~~~~~~~~-~~~~L~i~~~~~-~d~G~Y~C~a 186 (212)
T 2yd6_A 109 PTIDMGPQLKVVERTRTATMLCAASGNPDPEITWFKDFLPVDTSNNNGRIKQLRSE-SIGALQIEQSEE-SDQGKYECVA 186 (212)
T ss_dssp CEEEECCCCEEEETTSCEEEEEEEECSSCCEEEEEETTEEC------CCEEEEEET-TEEEEEECSCCG-GGCEEEEEEE
T ss_pred ceeecCCcceeEecCCCEEEEEEecCCCCCeEEEEECCccccCcCCCceEEEEecC-CeEEEEEcCCCc-ccCEEEEEEE
Confidence 56666666677888999999999999999999999999988543 2344333211 345699999998 9999999999
Q ss_pred eeCCCceEeeEEEEEEecCC
Q psy2442 89 ENGVGDAVSAEASLTVYEGE 108 (111)
Q Consensus 89 ~~~~~~~~~~~~~l~~~~~~ 108 (111)
.|..|...+....+.+...+
T Consensus 187 ~N~~G~~~s~~a~l~~~~~~ 206 (212)
T 2yd6_A 187 TNSAGTRYSAPANLYVRGTK 206 (212)
T ss_dssp EETTEEEECCCEEEEEEC--
T ss_pred ECCCCccccccccEEEEecc
Confidence 99998765566667666544
No 45
>2lu7_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=99.61 E-value=4.4e-14 Score=67.82 Aligned_cols=80 Identities=24% Similarity=0.377 Sum_probs=60.8
Q ss_pred cceeeecCCcEEEEEEEeccCCCeEEEEECCeeccCCCCceEEEeCCCCCeEEEEccCCCCCCCeEEEEEeeeCCCceEe
Q psy2442 18 RNQAVKAGGITSFYCIARGDPIPVIQWRKNGKRVSGTQSRYMVQEFPPGGSLLRIEPVRHARDDAVYECVAENGVGDAVS 97 (111)
Q Consensus 18 ~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~g~y~c~~~~~~~~~~~ 97 (111)
..+.+.+|+.+.|.|.+.+ |.+.+.|+++|..+... .++.+.... ....|.|.++.. .|+|.|.|.+.|. .
T Consensus 4 t~v~~~~G~~v~l~C~vs~-p~p~v~W~k~g~~l~~~-~~~~~~~~~-~~~~L~I~~~~~-~D~G~Y~C~a~n~-----~ 74 (84)
T 2lu7_A 4 TRVRSTPGGDLELVVHLSG-PGGPVRWYKDGERLASQ-GRVQLEQAG-ARQVLRVQGARS-GDAGEYLCDAPQD-----S 74 (84)
T ss_dssp CCEEECTTSCEEEECCCSC-CSTTCEEEETTEECCCC-SSEEEEECS-SCEEEEESSCSS-TTCEEEEEECTTT-----C
T ss_pred eEEEEecCCCEEEEEEECC-CCcEEEEEECCEEcccc-ccEEEeecC-CeEEEEecCCCC-cccEEEEEEECCE-----E
Confidence 3467889999999999866 77889999999998754 566555422 445699999998 9999999988553 3
Q ss_pred eEEEEEEec
Q psy2442 98 AEASLTVYE 106 (111)
Q Consensus 98 ~~~~l~~~~ 106 (111)
....|.|.+
T Consensus 75 ~~a~l~V~e 83 (84)
T 2lu7_A 75 RIFLVSVEE 83 (84)
T ss_dssp EEEEEEECC
T ss_pred EEEEEEEEC
Confidence 445566544
No 46
>2yd1_A Tyrosine-protein phosphatase LAR; hydrolase; 1.80A {Drosophila melanogaster} PDB: 3pxj_A
Probab=99.60 E-value=5.1e-13 Score=73.79 Aligned_cols=99 Identities=73% Similarity=1.199 Sum_probs=76.9
Q ss_pred CCCeeEEcCcceeeecCCcEEEEEEEeccCCCeEEEEECCeeccCCCCceEEEeCCCCCeEEEEccCCCCCCCeEEEEEe
Q psy2442 9 DPPEITLRPRNQAVKAGGITSFYCIARGDPIPVIQWRKNGKRVSGTQSRYMVQEFPPGGSLLRIEPVRHARDDAVYECVA 88 (111)
Q Consensus 9 ~~p~~~~~~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~g~y~c~~ 88 (111)
.+|.+...+....+..|+.+.|.|.+.+.|.+.+.|++++..+.....++...........|.|.++....|.|.|.|.+
T Consensus 5 ~pP~~~~~p~~~~v~~G~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~~d~G~Y~C~~ 84 (212)
T 2yd1_A 5 HPPEIIRKPQNQGVRVGGVASFYCAARGDPPPSIVWRKNGKKVSGTQSRYTVLEQPGGISILRIEPVRAGRDDAPYECVA 84 (212)
T ss_dssp CCCEEEECCCCEEEETTSCEEEEEEEECSSCCEEEEEETTEECCTTSTTEEEEEETTTEEEEEESSCCTTTTCSEEEEEE
T ss_pred CCCEEEcCCCceEEecCCEEEEEEEEccCCCCeEEEEECCEECCCCcceeEEEEcCCCeEEEEEEecCCCCcCceEEEEE
Confidence 57888888888889999999999999999989999999999886444566554332233568888887216899999999
Q ss_pred eeCCCceEeeEEEEEEecC
Q psy2442 89 ENGVGDAVSAEASLTVYEG 107 (111)
Q Consensus 89 ~~~~~~~~~~~~~l~~~~~ 107 (111)
.|..|......+.|.|...
T Consensus 85 ~n~~g~~~~~~~~l~V~~~ 103 (212)
T 2yd1_A 85 ENGVGDAVSADATLTIYEG 103 (212)
T ss_dssp ECSSSCEEEEEEEEEEECT
T ss_pred EeCCCCeEEeeEEEEEecc
Confidence 9988763366777777654
No 47
>3cx2_A Myosin-binding protein C, cardiac-type; protonation states, actin-binding, cardiomyopathy, cell adhesion, disease mutation, immunoglobulin domain; 1.30A {Homo sapiens} PDB: 2v6h_A 2avg_A
Probab=99.60 E-value=4.8e-14 Score=70.60 Aligned_cols=94 Identities=19% Similarity=0.238 Sum_probs=66.9
Q ss_pred CCeeEEcCcceeeecCCcEEEEEEEeccCC---CeEEEEECCeeccC--CCCceEEEe---CCC--CCeEEEEccCCCCC
Q psy2442 10 PPEITLRPRNQAVKAGGITSFYCIARGDPI---PVIQWRKNGKRVSG--TQSRYMVQE---FPP--GGSLLRIEPVRHAR 79 (111)
Q Consensus 10 ~p~~~~~~~~~~~~~g~~~~l~c~~~~~~~---~~~~w~~~~~~~~~--~~~~~~~~~---~~~--~~~~l~~~~~~~~~ 79 (111)
.|.+...+..+.+..|+.++|.|.+.+.|. +.+.|++++..... ...++.... ... ....|.|.++.. .
T Consensus 4 ~p~f~~~p~~~~v~~G~~v~L~C~~~g~p~~~~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~-~ 82 (108)
T 3cx2_A 4 IGLFVMRPQDGEVTVGGSITFSARVAGASLLKPPVVKWFKGKWVDLSSKVGQHLQLHDSYDRASKVYLFELHITDAQP-A 82 (108)
T ss_dssp CCSCSBCCCCEEEETTCCEEEEEEEECC-CCSCCEEEEEETTTEEGGGGCBTTEEEEEEEETTTTEEEEEEEECSCCG-G
T ss_pred ccEEEeCCCcEEEeCCCCEEEEEEECCCccCCCcEEEEccCCcccccccCCceEEEeeEEecccccceEEEEEecCCC-c
Confidence 355566677788999999999999999887 89999997632211 112333221 000 124599999998 9
Q ss_pred CCeEEEEEeeeCCCceEeeEEEEEEe
Q psy2442 80 DDAVYECVAENGVGDAVSAEASLTVY 105 (111)
Q Consensus 80 d~g~y~c~~~~~~~~~~~~~~~l~~~ 105 (111)
|+|.|.|.+.|..|.. ...+.|.|.
T Consensus 83 D~G~Y~C~a~N~~G~~-~~~~~L~V~ 107 (108)
T 3cx2_A 83 FTGSYRCEVSTKDKFD-CSNFNLTVH 107 (108)
T ss_dssp GCEEEEEEEECSSCEE-EEEEEEEEE
T ss_pred cCEEEEEEEecCCCce-EEEEEEEEe
Confidence 9999999999999874 777777764
No 48
>2yuv_A Myosin-binding protein C, SLOW-type; SLOW-type myosin-binding protein C, immunoglobulin domain, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2yxm_A
Probab=99.60 E-value=1.2e-13 Score=68.25 Aligned_cols=92 Identities=24% Similarity=0.374 Sum_probs=69.6
Q ss_pred CCCeeEEcCcc-eeeecCCcEEEEEEEeccCCCeEEEEECCeeccCCCCceEEEeCCCCCeEEEEccCCCCCCCeEEEEE
Q psy2442 9 DPPEITLRPRN-QAVKAGGITSFYCIARGDPIPVIQWRKNGKRVSGTQSRYMVQEFPPGGSLLRIEPVRHARDDAVYECV 87 (111)
Q Consensus 9 ~~p~~~~~~~~-~~~~~g~~~~l~c~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~g~y~c~ 87 (111)
.+|.+...+.. ..+..|+.+.|.|.+. .|.+.+.|++++..+... .++.+.... ....|.|.++.. .|+|.|.|.
T Consensus 6 ~~p~~~~~~~~~~~v~~G~~v~l~C~~~-~p~~~v~W~k~g~~i~~~-~~~~~~~~~-~~~~L~I~~~~~-~D~G~Y~C~ 81 (100)
T 2yuv_A 6 SGAAFAKILDPAYQVDKGGRVRFVVELA-DPKLEVKWYKNGQEIRPS-TKYIFEHKG-CQRILFINNCQM-TDDSEYYVT 81 (100)
T ss_dssp SSCCEEECCCSCEEECTTEEEEEEEEES-CTTSCEEEEESSCBCCCB-TTEEEEEET-TEEEEEEEEECT-TTCCEEEEE
T ss_pred CCCeEEecCCCccEEcCCCcEEEEEEec-CCCceEEEEECCEECCCC-CCEEEEecC-CEEEEEEcCCCc-CcCEEEEEE
Confidence 36777766665 5778999999999998 688899999999887643 455554322 334599999998 999999999
Q ss_pred eeeCCCceEeeEEEEEEecCCC
Q psy2442 88 AENGVGDAVSAEASLTVYEGEE 109 (111)
Q Consensus 88 ~~~~~~~~~~~~~~l~~~~~~~ 109 (111)
+ |.. .....|.|.++|.
T Consensus 82 a----g~~-~~~~~l~V~~~P~ 98 (100)
T 2yuv_A 82 A----GDE-KCSTELFVRSGPS 98 (100)
T ss_dssp E----TTE-EEEEEEEECCSCC
T ss_pred E----CCc-eEEEEEEEecCCC
Confidence 8 443 6677788877764
No 49
>2rik_A Titin; I-SET IG fold, poly-IG linear array, structural protein; 1.60A {Oryctolagus cuniculus} PDB: 2rjm_A
Probab=99.60 E-value=6e-14 Score=80.39 Aligned_cols=99 Identities=21% Similarity=0.376 Sum_probs=78.0
Q ss_pred eeEEecCCCeeEEcCcceeeecCCcEEEEEEEeccCCCeEEEEECCeeccCCCCceEEEeCCCCCeEEEEccCCCCCCCe
Q psy2442 3 RKVRFLDPPEITLRPRNQAVKAGGITSFYCIARGDPIPVIQWRKNGKRVSGTQSRYMVQEFPPGGSLLRIEPVRHARDDA 82 (111)
Q Consensus 3 ~~l~v~~~p~~~~~~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~g 82 (111)
+.|.|..+|.+...+....+..|+.+.|.|.+.+.|.+.+.|++++..+... .++...... ....|.+.++.. .|.|
T Consensus 185 ~~l~V~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~v~W~~~~~~~~~~-~~~~~~~~~-~~~~L~i~~v~~-~d~G 261 (284)
T 2rik_A 185 TSLKVKEPPVFRKKPHPVETLKGADVHLECELQGTPPFQVSWHKDKRELRSG-KKYKIMSEN-FLTSIHILNVDS-ADIG 261 (284)
T ss_dssp EEEEEECCCBCCSCCCCEEECTTCCEEEEEECBSSSCCEEEEEETTEEECBT-TTEEEEEET-TEEEEEECSCCG-GGCE
T ss_pred EEEEEecCCcceeCCCcceecCCCeEEEEEEEEecCCCEEEEEECCEECcCC-CCEEEEEcC-CEEEEEEcCCCc-ccCE
Confidence 4677888888876676677889999999999999999999999999988654 444443322 334588999998 9999
Q ss_pred EEEEEeeeCCCceEeeEEEEEEe
Q psy2442 83 VYECVAENGVGDAVSAEASLTVY 105 (111)
Q Consensus 83 ~y~c~~~~~~~~~~~~~~~l~~~ 105 (111)
.|.|.+.|..|.. ...+.|.|.
T Consensus 262 ~Y~C~a~N~~G~~-~~~~~l~V~ 283 (284)
T 2rik_A 262 EYQCKASNDVGSY-TCVGSITLK 283 (284)
T ss_dssp EEEEEEEETTEEE-EEEEEEEEC
T ss_pred EEEEEEEeCCCce-eEEEEEEEc
Confidence 9999999999874 666666653
No 50
>3b5h_A Cervical EMMPRIN, HAB18G/CD147; IG-like domain, cell invasion; 2.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.60 E-value=1.8e-13 Score=73.99 Aligned_cols=100 Identities=22% Similarity=0.428 Sum_probs=76.3
Q ss_pred eeEEecCCCeeEEcCcceeeecCCcEEEEEEEeccC-CCeEEEEE---CCe-eccCC-CCceEEEeCCCCCeEEEEccCC
Q psy2442 3 RKVRFLDPPEITLRPRNQAVKAGGITSFYCIARGDP-IPVIQWRK---NGK-RVSGT-QSRYMVQEFPPGGSLLRIEPVR 76 (111)
Q Consensus 3 ~~l~v~~~p~~~~~~~~~~~~~g~~~~l~c~~~~~~-~~~~~w~~---~~~-~~~~~-~~~~~~~~~~~~~~~l~~~~~~ 76 (111)
+.|.|..+|.+...+....+..|+.+.|.|.+.+.| .+.+.|++ ++. .+... ..++...... ....|.|..+.
T Consensus 76 ~~l~V~~~P~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~L~i~~v~ 154 (184)
T 3b5h_A 76 ANIQLHGPPRVKAVKSSEHINEGETAMLVCKSESVPPVTDWAWYKITDSEDKALMNGSESRFFVSSSQ-GRSELHIENLN 154 (184)
T ss_dssp EEEEECCSCCCEESCSEEEECTTSCEEEEEECCCSSCCCEEEEEECCSSSCEECCTTGGGTEEEEEET-TEEEEEECSCC
T ss_pred EEEEEecCCceeecCCCcEEcCCCcEEEEEEECCCCCCCeEEEEEcCCCCCEEeecCCCCEEEEEecC-CeeEEEEeecc
Confidence 567888889888777777788999999999999998 78999999 443 33322 2455554322 33569999998
Q ss_pred -CCCCCeEEEEEeeeCCCceEeeEEEEEEe
Q psy2442 77 -HARDDAVYECVAENGVGDAVSAEASLTVY 105 (111)
Q Consensus 77 -~~~d~g~y~c~~~~~~~~~~~~~~~l~~~ 105 (111)
. .|.|.|.|.+.|..|.. ...+.|.|.
T Consensus 155 ~~-~d~G~Y~C~a~N~~g~~-~~~~~l~V~ 182 (184)
T 3b5h_A 155 ME-ADPGQYRCNGTSSKGSD-QAIITLRVR 182 (184)
T ss_dssp TT-TSSEEEEEEEEETTEEE-EEEEEEEEC
T ss_pred cc-ccCceEEEEEEeCCCcc-eEEEEEEEe
Confidence 8 99999999999999874 666777664
No 51
>3b43_A Titin; I-SET IG fold, extended poly-IG filament, elastic FIL structural protein; 3.30A {Oryctolagus cuniculus}
Probab=99.60 E-value=5.4e-14 Score=87.69 Aligned_cols=102 Identities=21% Similarity=0.364 Sum_probs=81.4
Q ss_pred eeEEecCCCeeEEcCcceeeecCCcEEEEEEEeccCCCeEEEEECCeeccCCCCceEEEeCCCCCeEEEEccCCCCCCCe
Q psy2442 3 RKVRFLDPPEITLRPRNQAVKAGGITSFYCIARGDPIPVIQWRKNGKRVSGTQSRYMVQEFPPGGSLLRIEPVRHARDDA 82 (111)
Q Consensus 3 ~~l~v~~~p~~~~~~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~g 82 (111)
+.|.|..+|.+...+....+..|+.+.|.|.+.+.|.+.+.|++++..+... .++.+.... ....|.|.++.. .|+|
T Consensus 377 ~~l~V~~~P~~~~~~~~~~~~~G~~v~l~C~~~g~P~p~v~W~k~g~~l~~~-~~~~~~~~~-~~~~L~i~~v~~-~D~G 453 (570)
T 3b43_A 377 TSLKVKEPPVFRKKPHPVETLKGADVHLECELQGTPPFQVSWHKDKRELRSG-KKYKIMSEN-FLTSIHILNVDS-ADIG 453 (570)
T ss_dssp EEECEECCCEECSCCCCEEECTTCCEEEEEEEESSSSCCCEEEETTEECCSS-SSEEEEEET-TEEEEEECSCCG-GGCE
T ss_pred EEEEecCCCeeecCCCceeecCCCEEEEEEEEecCCCCEEEEEECCEECcCC-CCEEEEEcC-CEEEEEECCCCh-hhCE
Confidence 5677888898877777777889999999999999999999999999988643 455444322 334588999998 9999
Q ss_pred EEEEEeeeCCCceEeeEEEEEEecCC
Q psy2442 83 VYECVAENGVGDAVSAEASLTVYEGE 108 (111)
Q Consensus 83 ~y~c~~~~~~~~~~~~~~~l~~~~~~ 108 (111)
.|.|.+.|..|.. .....|.+..+|
T Consensus 454 ~Y~C~A~N~~G~~-~~~~~l~v~~~P 478 (570)
T 3b43_A 454 EYQCKASNDVGSD-TCVGSITLKAPP 478 (570)
T ss_dssp EEEEEEECSSCEE-EEEEEEEECCCC
T ss_pred EEEEEEEECCCeE-EEEEEEEeccCC
Confidence 9999999999874 666777776554
No 52
>2v9t_A Roundabout homolog 1; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens}
Probab=99.59 E-value=2.8e-14 Score=72.34 Aligned_cols=97 Identities=37% Similarity=0.544 Sum_probs=68.4
Q ss_pred ecCCCeeEEcCcceeeecCCcEEEEEEEeccCCCeEEEEECCeeccCCC--Cc-eEEEeCCCCCeEEEEc-----cCCCC
Q psy2442 7 FLDPPEITLRPRNQAVKAGGITSFYCIARGDPIPVIQWRKNGKRVSGTQ--SR-YMVQEFPPGGSLLRIE-----PVRHA 78 (111)
Q Consensus 7 v~~~p~~~~~~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~~~~~~~~~--~~-~~~~~~~~~~~~l~~~-----~~~~~ 78 (111)
+..+|.+...+....+..|+.+.|.|.+.+.|.|.+.|++++..+.... .+ ...... ... +.+. ++..
T Consensus 6 ~~~pP~i~~~p~~~~v~~G~~v~L~C~~~g~P~p~v~W~k~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~i~~~~v~~- 81 (117)
T 2v9t_A 6 EDFPPRIVEHPSDLIVSKGEPATLNCKAEGRPTPTIEWYKGGERVETDKDDPRSHRMLLP--SGS-LFFLRIVHGRKSR- 81 (117)
T ss_dssp CCEEEEEEECCCCEEECTTCCEEECCEEEEESCCEEEEEETTEECCCTTTCSSCSEEECT--TSC-EEESSCCCBTTBC-
T ss_pred ccCCCeeEcCCCCEEEcCCCcEEEEEECCccCCCeEEEEECCEeccccCCCCcceeEEec--CCc-EEEEEEEeCCCCc-
Confidence 3457788777888889999999999999999999999999998875331 11 111111 122 3333 4467
Q ss_pred CCCeEEEEEeeeCCCceEeeEEEEEEecC
Q psy2442 79 RDDAVYECVAENGVGDAVSAEASLTVYEG 107 (111)
Q Consensus 79 ~d~g~y~c~~~~~~~~~~~~~~~l~~~~~ 107 (111)
.|.|.|.|.+.|..|......+.+.+...
T Consensus 82 ~D~G~Y~C~a~N~~G~~~s~~~~l~~~~~ 110 (117)
T 2v9t_A 82 PDEGVYVCVARNYLGEAVSHDASLEVAAA 110 (117)
T ss_dssp SSCEEEEEEEEETTEEEECCCEEEEEC--
T ss_pred CcCEEEEEEEEeCccceEeeeEEEEhhhh
Confidence 89999999999999876555666666543
No 53
>2cry_A KIN of IRRE-like protein 3; IG fold, KIN of irregular chiasm-like protein 3, nephrin- like 2, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.1
Probab=99.59 E-value=3.1e-16 Score=80.20 Aligned_cols=102 Identities=24% Similarity=0.363 Sum_probs=78.1
Q ss_pred eeEEecCCCeeEEcCcceeeecCCcEEEEEEEeccCCCe-EEEEECCeeccCC-CCceEEEeC-CCC--CeEEEEccCCC
Q psy2442 3 RKVRFLDPPEITLRPRNQAVKAGGITSFYCIARGDPIPV-IQWRKNGKRVSGT-QSRYMVQEF-PPG--GSLLRIEPVRH 77 (111)
Q Consensus 3 ~~l~v~~~p~~~~~~~~~~~~~g~~~~l~c~~~~~~~~~-~~w~~~~~~~~~~-~~~~~~~~~-~~~--~~~l~~~~~~~ 77 (111)
++|.|..+|.+.. +....+..|+.+.|.|.+.+.|.|. +.|++++..+... ..++..... ... ...|.|.++..
T Consensus 7 ~~l~V~~~P~i~~-~~~~~~~~G~~v~l~C~~~g~P~p~~i~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~ 85 (122)
T 2cry_A 7 GTLTVNGPPIISS-TQTQHALHGEKGQIKCFIRSTPPPDRIAWSWKENVLESGTSGRYTVETISTEEGVISTLTISNIVR 85 (122)
T ss_dssp CCCCCCSSCCEEE-ECCCCCCTTSCCCCCEEECCSSCCSEEEEESSSCEECSEEETTEEEEEEEETTEEEEEEECTTCCH
T ss_pred EEEEEecCCCccC-CCeEEEecCCCEEEEEEEeecCCCcEeEEEECCEEccCCCCCCEEEEEecCCCceEEEEEEcCCCh
Confidence 5678889999887 6777888999999999999999986 9999998877542 245544211 001 33589999998
Q ss_pred CCCC-eEEEEEeeeCCCceEeeEEEEEEecC
Q psy2442 78 ARDD-AVYECVAENGVGDAVSAEASLTVYEG 107 (111)
Q Consensus 78 ~~d~-g~y~c~~~~~~~~~~~~~~~l~~~~~ 107 (111)
.|. |.|.|.+.|..|.. ...+.|.+.++
T Consensus 86 -~D~~G~Y~C~a~N~~G~~-~~~~~l~V~~~ 114 (122)
T 2cry_A 86 -ADFQTIYNCTAWNSFGSD-TEIIRLKEQGS 114 (122)
T ss_dssp -HHHHSCEEEEEECSSCEE-EEEECCCCSCS
T ss_pred -hhCCceEEEEEECCCCeE-EEEEEEEECCC
Confidence 898 99999999999975 67777666543
No 54
>2ens_A Advanced glycosylation END product-specific receptor; beta-sandwich, C2-SET, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.58 E-value=9.7e-15 Score=71.66 Aligned_cols=85 Identities=25% Similarity=0.498 Sum_probs=64.9
Q ss_pred CCeeEEcCcceeeecCCcEEEEEEEeccCCCeEEEEECCeeccCCCCceEEEeCCCCCeEEEEccCCCCCCCeEEEEEee
Q psy2442 10 PPEITLRPRNQAVKAGGITSFYCIARGDPIPVIQWRKNGKRVSGTQSRYMVQEFPPGGSLLRIEPVRHARDDAVYECVAE 89 (111)
Q Consensus 10 ~p~~~~~~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~g~y~c~~~ 89 (111)
++.+...+....+..|+.+.|.|.+.+.|.+.+.|++++..+... ....|.|.++.. .|+|.|.|.+.
T Consensus 10 ~~~i~~~p~~~~v~~G~~v~l~C~~~g~p~~~v~W~k~~~~~~~~-----------~~~~L~i~~v~~-~d~G~Y~C~a~ 77 (96)
T 2ens_A 10 EVQLVVEPEGGAVAPGGTVTLTCEVPAQPSPQIHWMKDGVPLPLP-----------PSPVLILPEIGP-QDQGTYSCVAT 77 (96)
T ss_dssp SCCCEEESTTSEECTTCEEEEECCCSSCSSCCCCCEESSSBCSSC-----------CCSEEEEESCCT-TTCEEEECEEC
T ss_pred CCEEEECCCCCEEcCCCeEEEEEEEccCCCCEEEEEECCEECcCC-----------CCCEEEECCCCc-ccCEEEEEEEE
Confidence 456666676778899999999999999888899999988876532 223488899998 99999999999
Q ss_pred eCCC-ceEeeEEEEEEec
Q psy2442 90 NGVG-DAVSAEASLTVYE 106 (111)
Q Consensus 90 ~~~~-~~~~~~~~l~~~~ 106 (111)
|..+ ...+..+.|.|.+
T Consensus 78 n~~~~~~~s~~~~v~V~~ 95 (96)
T 2ens_A 78 HSSHGPQESRAVSISIIE 95 (96)
T ss_dssp CSSCCCEECCCEEEEECC
T ss_pred eCCCCcEEEEEEEEEEeC
Confidence 9644 3234455665543
No 55
>3caf_A Fibroblast growth factor receptor 2; FGFR2, D2, ATP-binding, disease MU ectodermal dysplasia, glycoprotein, heparin-binding, immuno domain, kinase; 1.96A {Homo sapiens} PDB: 3cu1_A* 3euu_A 3dar_A 1wvz_A
Probab=99.58 E-value=7.8e-15 Score=72.40 Aligned_cols=82 Identities=35% Similarity=0.573 Sum_probs=62.7
Q ss_pred cceeeecCCcEEEEEEEeccCCCeEEEEECCeeccCCCC--ceEEEeCCCCCeEEEEccCCCCCCCeEEEEEeeeCCCce
Q psy2442 18 RNQAVKAGGITSFYCIARGDPIPVIQWRKNGKRVSGTQS--RYMVQEFPPGGSLLRIEPVRHARDDAVYECVAENGVGDA 95 (111)
Q Consensus 18 ~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~~~~~d~g~y~c~~~~~~~~~ 95 (111)
..+.+..|+.+.|.|.+.+.|.+.+.|++++..+..... .+.... ....|.|.++.. .|+|.|.|.+.|..|..
T Consensus 16 ~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~---~~~~L~i~~v~~-~D~G~Y~C~a~N~~g~~ 91 (100)
T 3caf_A 16 RLHAVPAANTVKFRCPAGGNPMPTMRWLKNGKEFKQEHRIGGYKVRN---QHWSLIMESVVP-SDKGNYTCVVENEYGSI 91 (100)
T ss_dssp CEEEECTTCCEEEECCEEEESCCEEEEEETTEECCGGGSTTCCEEEG---GGTEEEECSCCG-GGCEEEEEEEEETTEEE
T ss_pred cEEEecCCCEEEEEEEccccCCCEEEEEECCEEcccccccccEEEec---CeEEEEEccCCc-CCCEEEEEEEEeCCCEE
Confidence 346678899999999999999999999999988753211 122221 234599999998 99999999999998864
Q ss_pred EeeEEEEEE
Q psy2442 96 VSAEASLTV 104 (111)
Q Consensus 96 ~~~~~~l~~ 104 (111)
...+.|.|
T Consensus 92 -~~~~~l~V 99 (100)
T 3caf_A 92 -NHTYHLDV 99 (100)
T ss_dssp -EEEEEEEE
T ss_pred -EEEEEEEE
Confidence 66666654
No 56
>2eny_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.58 E-value=1.4e-14 Score=72.18 Aligned_cols=92 Identities=23% Similarity=0.286 Sum_probs=69.1
Q ss_pred CeeEEcCcceeeecCCcEEEEEEEeccCCC-eEEEEECCeeccCCCCceEEEeCCCCCeEEEEccCCCCCCCeEEEEEee
Q psy2442 11 PEITLRPRNQAVKAGGITSFYCIARGDPIP-VIQWRKNGKRVSGTQSRYMVQEFPPGGSLLRIEPVRHARDDAVYECVAE 89 (111)
Q Consensus 11 p~~~~~~~~~~~~~g~~~~l~c~~~~~~~~-~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~g~y~c~~~ 89 (111)
+.+...+....+..|+++.|.|.+.+.+.+ .+.|+++|..+... .++.+.... ....|.|.++.. .|+|.|.|.+.
T Consensus 9 ~~~~~~~~~~~v~~G~~v~l~C~v~~~~~~~~v~W~k~g~~i~~~-~r~~~~~~~-~~~~L~I~~v~~-~D~G~Y~C~a~ 85 (104)
T 2eny_A 9 VGITKRLKTMEVLEGESCSFECVLSHESASDPAMWTVGGKTVGSS-SRFQATRQG-RKYILVVREAAP-SDAGEVVFSVR 85 (104)
T ss_dssp CCCSBCCCCEEEESSCCEEEEEECSSCCCSSCBCCBSSSSBCSBC-SSCEEEEET-TEEEEEECSCCT-TTCSCEEEEET
T ss_pred CEEEecCCCcEEcCCCcEEEEEEEcCCCCCceeEEEECCEECCCC-CCEEEEEcC-CEEEEEECCCCH-HHCEEEEEEEC
Confidence 455666777889999999999999887644 79999999888644 455554321 334699999998 99999999875
Q ss_pred eCCCceEeeEEEEEEecCCCC
Q psy2442 90 NGVGDAVSAEASLTVYEGEEK 110 (111)
Q Consensus 90 ~~~~~~~~~~~~l~~~~~~~~ 110 (111)
| . .....|.|.++|..
T Consensus 86 ~----~-~~~a~L~V~~~p~~ 101 (104)
T 2eny_A 86 G----L-TSKASLIVRERSGP 101 (104)
T ss_dssp T----E-EEEECEEEECCCSS
T ss_pred C----e-eEEEEEEEeCCCcC
Confidence 4 2 55667777777654
No 57
>3laf_A Deleted in colorectal cancer; netrin-1 receptor, immunoglobulin superfamily, horseshoe, AP; HET: NAG BMA; 2.40A {Rattus norvegicus}
Probab=99.58 E-value=3.3e-14 Score=84.94 Aligned_cols=99 Identities=34% Similarity=0.563 Sum_probs=79.6
Q ss_pred eeEEecCCCeeEEcCcceeeecCCcEEEEEEEeccCCCeEEEEECCeeccCCCCceEEEeCCCCCeEEEEccCCCCCCCe
Q psy2442 3 RKVRFLDPPEITLRPRNQAVKAGGITSFYCIARGDPIPVIQWRKNGKRVSGTQSRYMVQEFPPGGSLLRIEPVRHARDDA 82 (111)
Q Consensus 3 ~~l~v~~~p~~~~~~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~g 82 (111)
+.|.|..+|.+...+....+..|+.+.|.|.+.+.|.+.+.|++++..+... .++... ....|.+..+.. .|.|
T Consensus 305 ~~l~V~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~v~W~~~g~~~~~~-~~~~~~----~~~~L~i~~v~~-~d~G 378 (403)
T 3laf_A 305 AELTVLVPPWFLNHPSNLYAYESMDIEFECAVSGKPVPTVNWMKNGDVVIPS-DYFQIV----GGSNLRILGVVK-SDEG 378 (403)
T ss_dssp EEEEEEEEEEEEECCCCEECCTTCCEEECCEEEEESCCEEEEEETTEECCCS-SSEEEE----TTTEEEESSCCG-GGCE
T ss_pred EEEEEECCCcEeecCcceEEecCCeEEEEEEEeeccCCEEEEEECCEECCCC-CcEEEe----cCccEEEecccc-ccCE
Confidence 4567777888877777778889999999999999999999999999987543 344433 345599999998 9999
Q ss_pred EEEEEeeeCCCceEeeEEEEEEecCC
Q psy2442 83 VYECVAENGVGDAVSAEASLTVYEGE 108 (111)
Q Consensus 83 ~y~c~~~~~~~~~~~~~~~l~~~~~~ 108 (111)
.|.|.+.|..|.. ...+.|.|.++|
T Consensus 379 ~Y~C~a~N~~G~~-~~~~~l~V~~P~ 403 (403)
T 3laf_A 379 FYQCVAENEAGNA-QSSAQLIVPKPA 403 (403)
T ss_dssp EEEEEEEETTEEE-EEEEEEECCCC-
T ss_pred EEEEEEEcCCceE-EEEEEEEEeCCC
Confidence 9999999999875 777777776653
No 58
>3kld_A Contactin 4, axcam, BIG-2; cell adhesion, protein complex, receptor protein tyrosine phosphatase; HET: NAG; 2.00A {Mus musculus} PDB: 3jxa_A*
Probab=99.58 E-value=3.9e-14 Score=84.57 Aligned_cols=95 Identities=28% Similarity=0.439 Sum_probs=77.6
Q ss_pred eeEEecCCCeeEEcCcceeeecCCcEEEEEEEeccCCCeEEEEECCeeccCCCCceEEEeCCCCCeEEEEccCCCCCCCe
Q psy2442 3 RKVRFLDPPEITLRPRNQAVKAGGITSFYCIARGDPIPVIQWRKNGKRVSGTQSRYMVQEFPPGGSLLRIEPVRHARDDA 82 (111)
Q Consensus 3 ~~l~v~~~p~~~~~~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~g 82 (111)
++|.|..+|.+...+....+..|+.+.|.|.+.|.|.|.+.|+++|..+... .++... ...|.|..+.. .|+|
T Consensus 288 ~~l~v~~~P~~~~~~~~~~v~~g~~v~l~C~~~g~P~p~i~W~k~g~~l~~~-~~~~~~-----~~~L~i~~v~~-~D~G 360 (384)
T 3kld_A 288 GQLTFYAQPNWVQIINDIHVAMEESVFWECKANGRPKPTYRWLKNGDPLLTR-DRIQIE-----QGTLNITIVNL-SDAG 360 (384)
T ss_dssp EEEEEEEEEEEEECCCCEEECTTCCEEEECEEEEESCCEEEEEETTEECCCB-TTEEEE-----TTEEEESSCCG-GGCE
T ss_pred EEEEEecCCccccCCCceEecCCCCEEEEeECCccCCCeEEEEECCEECCCC-ccEEEe-----CCEEEEeecCh-hhCE
Confidence 4677888888877777788889999999999999999999999999988543 455442 23599999998 9999
Q ss_pred EEEEEeeeCCCceEeeEEEEEEe
Q psy2442 83 VYECVAENGVGDAVSAEASLTVY 105 (111)
Q Consensus 83 ~y~c~~~~~~~~~~~~~~~l~~~ 105 (111)
.|.|.+.|..|.. .....|.|.
T Consensus 361 ~Y~C~A~N~~G~~-~~~a~L~V~ 382 (384)
T 3kld_A 361 MYQCVAENKHGVI-FSSAELSVI 382 (384)
T ss_dssp EEEEEEEETTEEE-EEEEEEEEC
T ss_pred EEEEEEEeCCceE-EeceEEEEe
Confidence 9999999999874 666666654
No 59
>1he7_A High affinity nerve growth factor receptor; transferase, TRK-receptor, strand-swapping; 2.0A {Homo sapiens} SCOP: b.1.1.4 PDB: 1wwa_X 1www_X
Probab=99.58 E-value=6.8e-14 Score=71.71 Aligned_cols=83 Identities=22% Similarity=0.244 Sum_probs=64.1
Q ss_pred cCCcEEEEEEEeccCCCeEEEEECCeeccCCCCceEEE-eC---C--CCCeEEEEccCCCCCCCeEEEEEeeeCCCceEe
Q psy2442 24 AGGITSFYCIARGDPIPVIQWRKNGKRVSGTQSRYMVQ-EF---P--PGGSLLRIEPVRHARDDAVYECVAENGVGDAVS 97 (111)
Q Consensus 24 ~g~~~~l~c~~~~~~~~~~~w~~~~~~~~~~~~~~~~~-~~---~--~~~~~l~~~~~~~~~d~g~y~c~~~~~~~~~~~ 97 (111)
.+..+.|.|.+.|.|.|.+.|+++|..+... .+.... .. . .....|.|..+.. .|+|.|.|.+.|..|.. .
T Consensus 14 ~~~~~~l~c~v~G~P~P~I~W~knG~~l~~~-~~~~~~~~~~~~~~~~~~~~L~i~~~~~-~D~G~YtC~A~N~~G~~-~ 90 (126)
T 1he7_A 14 EMHHWCIPFSVDGQPAPSLRWLFNGSVLNET-SFIFTEFLEPAANETVRHGCLRLNQPTH-VNNGNYTLLAANPFGQA-S 90 (126)
T ss_dssp CCCEEEEEEEECCSSCCEEEEEETTEECCCC-SSEEEEEECCCSSCCCEEEEEEEESCCG-GGCEEEEEEEEETTEEE-E
T ss_pred cCccEEEEEEEeeeCCCeEEEEECCEECCCC-CceeEEEeeccccccccceEEEECcCCC-CCCEEEEEEEEECCCeE-E
Confidence 5678999999999999999999999998754 332221 11 0 0124589999998 99999999999999975 7
Q ss_pred eEEEEEEecCCC
Q psy2442 98 AEASLTVYEGEE 109 (111)
Q Consensus 98 ~~~~l~~~~~~~ 109 (111)
..+.+.+...|.
T Consensus 91 ~t~~l~v~~~P~ 102 (126)
T 1he7_A 91 ASIMAAFMDNPF 102 (126)
T ss_dssp EEEEECCCSCTT
T ss_pred EEEEEEEEcCCC
Confidence 777787776654
No 60
>2cpc_A KIAA0657 protein; immunoglobulin domain, IG domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.58 E-value=3e-13 Score=68.08 Aligned_cols=95 Identities=21% Similarity=0.261 Sum_probs=68.7
Q ss_pred EecCCCeeEEcCcc---eeeecCCcEEEEEEEeccCCCeEEEEECCeeccCCCCceEEEeCCCCCeEEEEccCCCCCCCe
Q psy2442 6 RFLDPPEITLRPRN---QAVKAGGITSFYCIARGDPIPVIQWRKNGKRVSGTQSRYMVQEFPPGGSLLRIEPVRHARDDA 82 (111)
Q Consensus 6 ~v~~~p~~~~~~~~---~~~~~g~~~~l~c~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~g 82 (111)
.|..+|.+...+.. +.+..|+.+.|.|.+. .+.+.+.|++++..+... .++...... ....|.|.++.. .|.|
T Consensus 6 ~v~~pp~~~~~p~~~~~~~~~~G~~v~L~C~~~-~p~~~v~W~k~g~~~~~~-~~~~~~~~~-~~~~L~I~~v~~-~D~G 81 (113)
T 2cpc_A 6 SGTDVSSWIVYPSGKVYVAAVRLERVVLTCELC-RPWAEVRWTKDGEEVVES-PALLLQKED-TVRRLVLPAVQL-EDSG 81 (113)
T ss_dssp CCCSCSCSEEESCSCEEEEEETTCCEEEEEEES-CTTCCCEEEETTEECCCB-TTBEEEECS-SEEEEEESSCCT-TTCE
T ss_pred ccccCCcEEEccCCceeEEEEcCCeEEEEEEec-CCCCeEEEEECCEECccC-CCEEEEECC-CEEEEEECCCCc-ccCE
Confidence 34556655544443 5677899999999985 677899999999988643 455544311 235699999998 9999
Q ss_pred EEEEEeeeCCCceEeeEEEEEEecCCC
Q psy2442 83 VYECVAENGVGDAVSAEASLTVYEGEE 109 (111)
Q Consensus 83 ~y~c~~~~~~~~~~~~~~~l~~~~~~~ 109 (111)
.|.|.+.| . ...+.|.|.++|.
T Consensus 82 ~Y~C~a~n----~-~~~~~l~V~~~p~ 103 (113)
T 2cpc_A 82 EYLCEIDD----E-SASFTVTVTEPPV 103 (113)
T ss_dssp EEEEESSS----C-EEEEEEEEECCCC
T ss_pred EEEEEEec----C-cEEEEEEEecCCc
Confidence 99999988 2 4566677776653
No 61
>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A
Probab=99.58 E-value=1.3e-13 Score=82.05 Aligned_cols=106 Identities=18% Similarity=0.281 Sum_probs=80.3
Q ss_pred eeEEecCCCeeEEcCcceeeecCCcEEEEEEEeccCCCeEEEEECCeeccCCC-CceEEEeCCCCCeEEEEccCCCCCCC
Q psy2442 3 RKVRFLDPPEITLRPRNQAVKAGGITSFYCIARGDPIPVIQWRKNGKRVSGTQ-SRYMVQEFPPGGSLLRIEPVRHARDD 81 (111)
Q Consensus 3 ~~l~v~~~p~~~~~~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~d~ 81 (111)
+.|.|..+|.+...+....+..|+.+.|.|.+.+.|.+.+.|++++..+.... .++...... ....|.+.++.. .|.
T Consensus 93 ~~l~V~~~P~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~i~W~~~g~~l~~~~~~~~~~~~~~-~~~~L~i~~~~~-~d~ 170 (389)
T 2jll_A 93 MYLDIEYAPKFISNQTIYYSWEGNPINISCDVKSNPPASIHWRRDKLVLPAKNTTNLKTYSTG-RKMILEIAPTSD-NDF 170 (389)
T ss_dssp EEEEEEEEEEECCSCCEEEECTTCCEEEEECEEEESCCEEEEEETTEESSCTTCTTEEEEECS-SCEEEEECCCST-TSS
T ss_pred EEEEEEeCCEEecCcceEEeccCCEEEEEEEEEecCCCeEEEEECCccCCcccCceEEEeccC-CEEEEEECCCCh-hhC
Confidence 56777777877655544467889999999999999999999999999886432 244443322 445699999998 999
Q ss_pred eEEEEEeeeCCCceEeeEEEEEEecCCCCC
Q psy2442 82 AVYECVAENGVGDAVSAEASLTVYEGEEKP 111 (111)
Q Consensus 82 g~y~c~~~~~~~~~~~~~~~l~~~~~~~~p 111 (111)
|.|.|.+.|..|.. ...+.+.+...|..|
T Consensus 171 G~Y~C~a~N~~G~~-~~~~~l~v~~~P~~P 199 (389)
T 2jll_A 171 GRYNCTATNHIGTR-FQEYILALADVPSSP 199 (389)
T ss_dssp EEEEEEEEETTEEE-EEEEEEEECCCCCCC
T ss_pred EEEEEEEEcCCCcE-EEEEEEEecCCCCCC
Confidence 99999999998874 666666666666554
No 62
>3b43_A Titin; I-SET IG fold, extended poly-IG filament, elastic FIL structural protein; 3.30A {Oryctolagus cuniculus}
Probab=99.58 E-value=1.2e-13 Score=86.09 Aligned_cols=100 Identities=14% Similarity=0.242 Sum_probs=79.9
Q ss_pred eeEEecCCCeeEEcCcceeeecCCcEEEEEEEeccCCCeEEEEECCeeccCCCCceEEEeCCCCCeEEEEccCCCCCCCe
Q psy2442 3 RKVRFLDPPEITLRPRNQAVKAGGITSFYCIARGDPIPVIQWRKNGKRVSGTQSRYMVQEFPPGGSLLRIEPVRHARDDA 82 (111)
Q Consensus 3 ~~l~v~~~p~~~~~~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~g 82 (111)
+.|.|..+|.+...+....+..|+.+.|.|.+.+.|.+.+.|++++..+.....++.+.... ....|.|..+.. .|+|
T Consensus 470 ~~l~v~~~P~~~~~~~~~~~~~g~~~~l~c~~~g~p~~~v~W~k~~~~~~~~~~~~~~~~~~-~~~~L~i~~~~~-~d~G 547 (570)
T 3b43_A 470 GSITLKAPPRFVKKLSDISTVVGEEVQLQATIEGAEPISVAWFKDKGEIVRESDNIWISYSE-NIATLQFSRAEP-ANAG 547 (570)
T ss_dssp EEEEECCCCEEEECCCCBCCBTTCCEEEEEEEESCSSCCCEEEETTEECCCCTTTEEECCCS-SEEEEEESSCCT-TCCE
T ss_pred EEEEeccCCcccccCCCceecCCCeEEEEEEEecCCCCEEEEEeCCeEeccCCCeEEEEECC-CEEEEEECcCCH-HHCE
Confidence 56788899999888877888899999999999999999999999987664433454443211 335699999998 9999
Q ss_pred EEEEEeeeCCCceEeeEEEEEEe
Q psy2442 83 VYECVAENGVGDAVSAEASLTVY 105 (111)
Q Consensus 83 ~y~c~~~~~~~~~~~~~~~l~~~ 105 (111)
.|.|.+.|..|.. .....|.|.
T Consensus 548 ~Y~C~a~N~~G~~-~~~a~L~V~ 569 (570)
T 3b43_A 548 KYTCQIKNEAGTQ-ECFATLSVL 569 (570)
T ss_dssp EEEEEEECSSCEE-EEEEEECCB
T ss_pred EEEEEEEECCcEE-EEEEEEEEe
Confidence 9999999999975 777766553
No 63
>4hwu_A Fibroblast growth factor receptor 2; FGFR2, KGFR, CD332, IG-C2 type 1 domain, IG superfamily, IMM system, structural genomics, PSI-biology; 2.90A {Mus musculus}
Probab=99.58 E-value=5e-14 Score=68.94 Aligned_cols=84 Identities=25% Similarity=0.485 Sum_probs=64.9
Q ss_pred cCcceeeecCCcEEEEEEEeccCCCeEEEEECCeeccCCCCceEEEeCCCCCeEEEEccCCCCCCCeEEEEEeeeCCCce
Q psy2442 16 RPRNQAVKAGGITSFYCIARGDPIPVIQWRKNGKRVSGTQSRYMVQEFPPGGSLLRIEPVRHARDDAVYECVAENGVGDA 95 (111)
Q Consensus 16 ~~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~g~y~c~~~~~~~~~ 95 (111)
.+....+..|+.+.|.|.+.+ .+.+.|++++..+... .++... ...|.|.++.. .|+|.|.|.+.|..|..
T Consensus 7 ~p~~~~v~~G~~~~l~C~~~~--~p~v~W~k~g~~~~~~-~~~~~~-----~~~L~i~~~~~-~D~G~Y~C~a~n~~g~~ 77 (95)
T 4hwu_A 7 QPEAYVVAPGESLELQCMLKD--AAVISWTKDGVHLGPN-NRTVLI-----GEYLQIKGATP-RDSGLYACTAARTVDSE 77 (95)
T ss_dssp -CEEEEECTTSCEEEECCCCT--TCEEEEEETTEEECCC-SSEEEE-----TTEEEECSCCG-GGCEEEEEEEECSSCEE
T ss_pred CCCcEEECCCCEEEEEEEeCC--CCEEEEEECCEECCCC-ceEEEe-----CCEEEECcCCc-ccCEEEEEEEccCCCcE
Confidence 455567889999999999876 4699999999888643 454442 23599999998 99999999999998864
Q ss_pred EeeEEEEEEecCCC
Q psy2442 96 VSAEASLTVYEGEE 109 (111)
Q Consensus 96 ~~~~~~l~~~~~~~ 109 (111)
...+.+.|.+++.
T Consensus 78 -~~~~~l~V~~~~~ 90 (95)
T 4hwu_A 78 -TWIFMVNVTDAAE 90 (95)
T ss_dssp -EEEEEEEECCC--
T ss_pred -EEEEEEEEeCCcc
Confidence 7788888776653
No 64
>2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens}
Probab=99.58 E-value=1.3e-13 Score=79.74 Aligned_cols=96 Identities=31% Similarity=0.492 Sum_probs=76.0
Q ss_pred CCCeeEEcCcceeeecCCcEEEEEEEeccCCCeEEEEECCeeccCCCCceEEEeCCCCCeEEEEccCCCCCCCeEEEEEe
Q psy2442 9 DPPEITLRPRNQAVKAGGITSFYCIARGDPIPVIQWRKNGKRVSGTQSRYMVQEFPPGGSLLRIEPVRHARDDAVYECVA 88 (111)
Q Consensus 9 ~~p~~~~~~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~g~y~c~~ 88 (111)
.+|.+...+..+.+..|+.+.|.|.+.+.|.+.+.|++++..+.....++......+....|.|.++.. .|.|.|.|.+
T Consensus 3 ~~P~~~~~p~~~~v~~G~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~-~d~G~Y~C~a 81 (305)
T 2nzi_A 3 MAPHFKEELRNLNVRYQSNATLVCKVTGHPKPIVKWYRQGKEIIADGLKYRIQEFKGGYHQLIIASVTD-DDATVYQVRA 81 (305)
T ss_dssp CCCEEEECCCCEEECTTCCEEEEEEEECSSCCEEEEEETTEECCCCSSSEEEEEETTTEEEEEESSCCG-GGCSEEEEEE
T ss_pred CCCeeeecccceEEeCCCcEEEEEEEeCCCCCeEEEEECCEEcccCCCeEEEEECCCCEEEEEEccCCh-hhCeEEEEEE
Confidence 478888888888999999999999999999999999999998865444555443232334699999998 9999999999
Q ss_pred eeCCCceEeeEEEEEEec
Q psy2442 89 ENGVGDAVSAEASLTVYE 106 (111)
Q Consensus 89 ~~~~~~~~~~~~~l~~~~ 106 (111)
.|..|.. .....|.|..
T Consensus 82 ~n~~g~~-~~~~~l~V~~ 98 (305)
T 2nzi_A 82 TNQGGSV-SGTASLEVEV 98 (305)
T ss_dssp EETTEEE-EEEEEEEECE
T ss_pred EcCCCCc-cceEEEEEec
Confidence 9987763 6666666643
No 65
>2r15_A Myomesin-1; sarcomeric protein, IG-like domains, homodimer, immunoglobul domain, muscle protein, thick filament, contractIle protein; 2.24A {Homo sapiens}
Probab=99.58 E-value=2.5e-13 Score=74.82 Aligned_cols=89 Identities=22% Similarity=0.385 Sum_probs=70.9
Q ss_pred cCcceeeecCCcEEEEEEEeccCCCeEEEEECCeeccCCCCceEEEeCCCCCeEEEEccCCCCCCCeEEEEEeeeCCCce
Q psy2442 16 RPRNQAVKAGGITSFYCIARGDPIPVIQWRKNGKRVSGTQSRYMVQEFPPGGSLLRIEPVRHARDDAVYECVAENGVGDA 95 (111)
Q Consensus 16 ~~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~g~y~c~~~~~~~~~ 95 (111)
.+....+..|+.+.|.|.+.+.|.+.+.|++++..+... .++.....++....|.+.++.. .|.|.|.|.+.|..|..
T Consensus 123 ~~~~~~v~~g~~~~l~C~~~g~p~p~v~W~~~~~~~~~~-~~~~~~~~~~~~~~L~i~~~~~-~d~G~Y~C~a~N~~g~~ 200 (212)
T 2r15_A 123 LPDVVTIQEGKALNLTCNVWGDPPPEVSWLKNEKALAQT-DHCNLKFEAGRTAYFTINGVST-ADSGKYGLVVKNKYGSE 200 (212)
T ss_dssp CCSEEEEETTCCEEEEEEEECSSCCEEEEEETTEEECCC-SSEEEEEETTTEEEEEESSCCG-GGCEEEEEEEEETTEEE
T ss_pred CCCcEEEccCCeEEEEEEEcCCCCceEEEEECCeECccC-CCEEEEEcCCCEEEEEEcCcch-HHCeEEEEEEEcCCCcE
Confidence 344567889999999999999999999999999988654 4555544322345699999998 99999999999999874
Q ss_pred EeeEEEEEEecC
Q psy2442 96 VSAEASLTVYEG 107 (111)
Q Consensus 96 ~~~~~~l~~~~~ 107 (111)
...+.|.|..+
T Consensus 201 -~~~~~l~V~~P 211 (212)
T 2r15_A 201 -TSDFTVSVFIP 211 (212)
T ss_dssp -EEEEEEEEECC
T ss_pred -EEEEEEEEEcc
Confidence 77777877654
No 66
>2dlt_A Myosin binding protein C, fast-type; IG-like domain, mybpc2, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.57 E-value=6.4e-14 Score=69.87 Aligned_cols=80 Identities=24% Similarity=0.321 Sum_probs=64.1
Q ss_pred CCCeeEEcCcceeeecCCcEEEEEEEeccCCCeEEEEECCeeccCCCCceEEEeCCCCCeEEEEccCCCCCCCeEEEEEe
Q psy2442 9 DPPEITLRPRNQAVKAGGITSFYCIARGDPIPVIQWRKNGKRVSGTQSRYMVQEFPPGGSLLRIEPVRHARDDAVYECVA 88 (111)
Q Consensus 9 ~~p~~~~~~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~g~y~c~~ 88 (111)
.+|.+...+..+.+..|+.+.|.|.+.+.+.+ +.|++++..+... .++.+.... ....|.|.++.. .|+|.|.|.+
T Consensus 7 ~~p~~~~~~~~~~v~~G~~v~l~C~~~~~~~~-v~W~k~g~~~~~~-~~~~~~~~~-~~~~L~I~~v~~-~D~G~Y~C~a 82 (106)
T 2dlt_A 7 GQLEVLQDIADLTVKAAEQAVFKCEVSDEKVT-GKWYKNGVEVRPS-KRITISHVG-RFHKLVIDDVRP-EDEGDYTFVP 82 (106)
T ss_dssp CCCCEEECCCCEEEESSCCEECCCEESCSSCE-EEEEESSCBCCCC-SSCEEEEET-TEEEEEESSCCT-TTCSCEEEEE
T ss_pred CCCEEecCCCCeEEeCCCeEEEEEEEcCCCcc-eEEEcCCEECcCC-CCEEEEEeC-CEEEEEECCCCc-CCCEEEEEEE
Confidence 46777777888899999999999999988776 9999999887644 455554311 335699999998 9999999999
Q ss_pred eeCC
Q psy2442 89 ENGV 92 (111)
Q Consensus 89 ~~~~ 92 (111)
.|..
T Consensus 83 ~n~~ 86 (106)
T 2dlt_A 83 DGYA 86 (106)
T ss_dssp ETSC
T ss_pred ccCC
Confidence 9973
No 67
>3rbg_A Cytotoxic and regulatory T-cell molecule; IGV, crtam, structural genomics, PSI-biology, NEW YORK struc genomics research consortium, nysgrc; 2.30A {Homo sapiens}
Probab=99.57 E-value=3.7e-14 Score=72.65 Aligned_cols=91 Identities=15% Similarity=0.273 Sum_probs=66.2
Q ss_pred cCcceeeecCCcEEEEEEEeccCCCeEEEEECCeecc-------CCCCceEEEeCCCCCeEEEEccCCCCCCCeEEEEEe
Q psy2442 16 RPRNQAVKAGGITSFYCIARGDPIPVIQWRKNGKRVS-------GTQSRYMVQEFPPGGSLLRIEPVRHARDDAVYECVA 88 (111)
Q Consensus 16 ~~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~~~~~~-------~~~~~~~~~~~~~~~~~l~~~~~~~~~d~g~y~c~~ 88 (111)
.+..+.+..|++++|.|...+.+.+.+.|++.+..+. ....++...........|.|.++.. .|+|.|.|.+
T Consensus 7 ~~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~-~DsG~Y~C~a 85 (124)
T 3rbg_A 7 HTETITVEEGQTLTLKCVTSLRKNSSLQWLTPSGFTIFLNEYPVLKNSKYQLLHHSANQLSITVPNVTL-QDEGVYKCLH 85 (124)
T ss_dssp SEEEEEEETTSCEEEEEECCCCTTCEEEEECTTSCEEEETTEECSCSSCCEEEEEETTEEEEEESSCCG-GGCEEEEEEE
T ss_pred CCccEEEcCCCCEEEEeEEeccCCCEEEEECCCCeEEEEeccccccCCcEEEEeCCCCEEEEEECCCCh-HHCEEEEEEE
Confidence 3455788899999999999998889999997654321 1224444432111335699999998 9999999999
Q ss_pred eeCCCceEeeEEEEEEecCCC
Q psy2442 89 ENGVGDAVSAEASLTVYEGEE 109 (111)
Q Consensus 89 ~~~~~~~~~~~~~l~~~~~~~ 109 (111)
.|. +. ......|.|..+|.
T Consensus 86 ~n~-g~-~~~~~~l~V~~~P~ 104 (124)
T 3rbg_A 86 YSD-SV-STKEVKVIVLATMK 104 (124)
T ss_dssp ESS-SE-EEEEEEEEEECC--
T ss_pred EcC-CC-CcEEEEEEEEeCCC
Confidence 998 65 47788888887764
No 68
>2yd6_A PTPRD protein; hydrolase; HET: FLC; 1.35A {Homo sapiens} PDB: 2yd7_A 2yd2_A 2yd3_A 2yd4_A* 2yd8_A* 2yd5_A* 3pxh_A
Probab=99.57 E-value=2.3e-13 Score=75.21 Aligned_cols=96 Identities=45% Similarity=0.779 Sum_probs=72.8
Q ss_pred cCCCeeEEcCcceeeecCCcEEEEEEEeccCCCeEEEEECCeeccCCCCceEEEeCCCCCeEEEEccC-CCCCCCeEEEE
Q psy2442 8 LDPPEITLRPRNQAVKAGGITSFYCIARGDPIPVIQWRKNGKRVSGTQSRYMVQEFPPGGSLLRIEPV-RHARDDAVYEC 86 (111)
Q Consensus 8 ~~~p~~~~~~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~d~g~y~c 86 (111)
..+|.+...+....+..|+.+.|.|.+.+.|.+.+.|++++..+...... ...........|.|.++ .. .|.|.|.|
T Consensus 4 ~~~P~~~~~p~~~~v~~G~~v~L~C~~~g~p~~~v~W~k~~~~~~~~~~~-~~~~~~~~~~~L~i~~v~~~-~d~G~Y~C 81 (212)
T 2yd6_A 4 ETPPRFTRTPVDQTGVSGGVASFICQATGDPRPKIVWNKKGKKVSNQRFE-VIEFDDGSGSVLRIQPLRTP-RDEAIYEC 81 (212)
T ss_dssp CEEEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCTTEE-EEEEGGGTEEEEEECSCCTT-TTCEEEEE
T ss_pred CCCCeEEeCcceeEEecCCeEEEEEEEeeCCCCEEEEEECCcCCCCCcee-EEEEcCCCceEEEEeccCCC-CCCeEEEE
Confidence 45678888888888999999999999999999999999999988643211 22111113455899998 47 99999999
Q ss_pred EeeeCCCceEeeEEEEEEec
Q psy2442 87 VAENGVGDAVSAEASLTVYE 106 (111)
Q Consensus 87 ~~~~~~~~~~~~~~~l~~~~ 106 (111)
.+.|..|.. ...+.|.|..
T Consensus 82 ~a~n~~g~~-~~~~~l~V~~ 100 (212)
T 2yd6_A 82 VASNNVGEI-SVSTRLTVLR 100 (212)
T ss_dssp EEEETTEEE-EEEEEEEEEC
T ss_pred EEEcCCCcE-EEEEEEEEec
Confidence 999988763 6666776654
No 69
>2rik_A Titin; I-SET IG fold, poly-IG linear array, structural protein; 1.60A {Oryctolagus cuniculus} PDB: 2rjm_A
Probab=99.56 E-value=5.2e-13 Score=76.52 Aligned_cols=97 Identities=26% Similarity=0.433 Sum_probs=76.6
Q ss_pred cCCCeeEEcCcceeeecCCcEEEEEEEeccCCCeEEEEECCeeccCCCCceEEEeCCCCCeEEEEccCCCCCCCeEEEEE
Q psy2442 8 LDPPEITLRPRNQAVKAGGITSFYCIARGDPIPVIQWRKNGKRVSGTQSRYMVQEFPPGGSLLRIEPVRHARDDAVYECV 87 (111)
Q Consensus 8 ~~~p~~~~~~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~g~y~c~ 87 (111)
..+|.+...+..+.+..|+.+.|.|.+.+.|.+.+.|++++..+... .++...... ....|.|.++.. .|.|.|.|.
T Consensus 3 ~~pP~~~~~p~~~~~~~G~~v~l~C~~~g~p~~~v~W~~~~~~~~~~-~~~~~~~~~-~~~~L~i~~v~~-~d~G~Y~C~ 79 (284)
T 2rik_A 3 MAPPFFDLKPVSVDLALGESGTFKCHVTGTAPIKITWAKDNREIRPG-GNYKMTLVE-NTATLTVLKVTK-GDAGQYTCY 79 (284)
T ss_dssp CCCCEEEECCCCEEEETTCCEEEEEEEESSSCCEEEEEETTEECCSS-SSEEEEEET-TEEEEEESSCCG-GGCEEEEEE
T ss_pred cCCCEEEccccceEecCCCcEEEEEEEEcCCCCEEEEEECCEECcCC-CcEEEEEcC-CEEEEEEecCCc-ccCEEEEEE
Confidence 46788888888888999999999999999888899999999988643 344333211 345699999998 999999999
Q ss_pred eeeCCCceEeeEEEEEEecCC
Q psy2442 88 AENGVGDAVSAEASLTVYEGE 108 (111)
Q Consensus 88 ~~~~~~~~~~~~~~l~~~~~~ 108 (111)
+.|..|.. .....|.+..+|
T Consensus 80 ~~n~~g~~-~~~~~l~V~~~p 99 (284)
T 2rik_A 80 ASNVAGKD-SCSAQLGVQEPP 99 (284)
T ss_dssp EEETTEEE-EEEEEEEEECCC
T ss_pred EEECCceE-EEEEEEEccCCC
Confidence 99987763 667777776554
No 70
>4fqp_A Poliovirus receptor; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA FUC MAN; 3.60A {Homo sapiens} PDB: 1nn8_R 1dgi_R
Probab=99.56 E-value=5.2e-14 Score=81.82 Aligned_cols=95 Identities=24% Similarity=0.392 Sum_probs=71.5
Q ss_pred eEEecCCCeeEEc-CcceeeecCCcEEEEEEEeccCCC-eEEEEECCeeccCCCCceEEEeCCCCCeEEEEccCCCCCCC
Q psy2442 4 KVRFLDPPEITLR-PRNQAVKAGGITSFYCIARGDPIP-VIQWRKNGKRVSGTQSRYMVQEFPPGGSLLRIEPVRHARDD 81 (111)
Q Consensus 4 ~l~v~~~p~~~~~-~~~~~~~~g~~~~l~c~~~~~~~~-~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~ 81 (111)
.|.|..+|.+... .....+..|+.+.|.|.+.+.|.| .+.|++++..+... ... ....|.|.++.. .|+
T Consensus 210 ~l~V~~~P~v~~~~~~~~~~~~g~~v~l~C~~~g~P~p~~v~W~~~~~~l~~~---~~~-----~~~~L~i~~v~~-~d~ 280 (313)
T 4fqp_A 210 NLTVYYPPEVSISGYDNNWYLGQNEATLTCDARSNPEPTGYNWSTTMGPLPPF---AVA-----QGAQLLIRPVDK-PIN 280 (313)
T ss_dssp ECCBCEEEEEEEECCCSCEETTCCCEEEEEEEEEESCCCEEEEEETTBSCCTT---EEE-----ETTEEEECCCSS-CCE
T ss_pred ecccccCCccccccccceeecCCCeEEEEEEecCCCCCcEEEEEECCEECCCc---eEE-----eCCEEEECcCCh-hhC
Confidence 4455566766433 333455678899999999999988 69999999877532 111 234589999998 999
Q ss_pred eEEEEEeeeCCCceEeeEEEEEEecCC
Q psy2442 82 AVYECVAENGVGDAVSAEASLTVYEGE 108 (111)
Q Consensus 82 g~y~c~~~~~~~~~~~~~~~l~~~~~~ 108 (111)
|.|.|.+.|..|.. ...+.|.|.++|
T Consensus 281 G~Y~C~a~N~~G~~-~~~~~l~V~~~P 306 (313)
T 4fqp_A 281 TTLICNVTNALGAR-QAELTVQVKEGP 306 (313)
T ss_dssp EEEEEEEECSSCEE-EEEEEEEEECCC
T ss_pred EEEEEEEEeCCCcE-EEEEEEEEEeCC
Confidence 99999999999975 788888887654
No 71
>2edk_A Myosin-binding protein C, fast-type; IG fold, fast MYBP-C, C-protein, skeletal muscle fast- isoform, MYBPCF, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.56 E-value=1.4e-14 Score=71.66 Aligned_cols=91 Identities=24% Similarity=0.340 Sum_probs=67.3
Q ss_pred CCeeEEcCcceeeecCCcEEEEEEEeccCCCeEEEEECCeeccCCCC---ceEEEeCCCCCeEEEEccCCCCCCCeEEEE
Q psy2442 10 PPEITLRPRNQAVKAGGITSFYCIARGDPIPVIQWRKNGKRVSGTQS---RYMVQEFPPGGSLLRIEPVRHARDDAVYEC 86 (111)
Q Consensus 10 ~p~~~~~~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~~~~~~~d~g~y~c 86 (111)
+|.+...+....+..|+.+.|.|.+.+.+ +.+.|++++..+..... ++.+.... ....|.|.++.. .|+|.|.|
T Consensus 8 p~~~~~~~~~~~v~~G~~v~l~C~~~~~~-~~v~W~k~g~~i~~~~~~~~~~~~~~~~-~~~~L~I~~~~~-~D~G~Y~C 84 (101)
T 2edk_A 8 PVLIVTPLEDQQVFVGDRVEMAVEVSEEG-AQVMWMKNGVELTREDSFKARYRFKKDG-KRHILIFSDVVQ-EDRGRYQV 84 (101)
T ss_dssp CCCEEECCCCEEEESSCCCBCCEEESCSS-CCCEEEESSCBCCCSCCSSCCCEEEECS-SEEEEECSSCCG-GGCSBEEE
T ss_pred CCEEEecCCceEEcCCCCEEEEEEEeCCC-CEEEEEECCEECCCCCCcceeEEEEECC-CEEEEEECCCCh-hhCEEEEE
Confidence 56666777778899999999999999888 89999999988764321 45554321 334589999998 99999999
Q ss_pred EeeeCCCceEeeEEEEEEecCC
Q psy2442 87 VAENGVGDAVSAEASLTVYEGE 108 (111)
Q Consensus 87 ~~~~~~~~~~~~~~~l~~~~~~ 108 (111)
.+.|. .....|.|.++|
T Consensus 85 ~a~n~-----~~~~~l~V~~~P 101 (101)
T 2edk_A 85 ITNGG-----QCEAELIVEEKQ 101 (101)
T ss_dssp ECSSC-----EECCBEEEECCC
T ss_pred EEcCC-----cEEEEEEEeCCC
Confidence 99872 233445555543
No 72
>1z9m_A GAPA225; nectin-like, IG-like domain, V domain, cell adhesion; 2.40A {Homo sapiens}
Probab=99.56 E-value=1e-13 Score=72.74 Aligned_cols=93 Identities=20% Similarity=0.310 Sum_probs=68.5
Q ss_pred EEcCcceeeecCCcEEEEEEEeccCCCeEEEEE---------CCeeccCCCCceEEEeCCCCCeEEEEccCCCCCCCeEE
Q psy2442 14 TLRPRNQAVKAGGITSFYCIARGDPIPVIQWRK---------NGKRVSGTQSRYMVQEFPPGGSLLRIEPVRHARDDAVY 84 (111)
Q Consensus 14 ~~~~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~---------~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~g~y 84 (111)
...+..+.+..|++++|.|...+.+.+.+.|++ ++..+. ..++...........|.|.++.. .|+|.|
T Consensus 42 ~~~p~~~~v~~G~~v~L~C~~~~~~~~~i~W~~~~~~~i~~~~~~~~~--~~r~~~~~~~~~~~~L~I~~v~~-~DsG~Y 118 (145)
T 1z9m_A 42 QPWTSDETVVAGGTVVLKCQVKDHEDSSLQWSNPAQQTLYFGEKRALR--DNRIQLVTSTPHELSISISNVAL-ADEGEY 118 (145)
T ss_dssp CCBCCCEEEETTSCEEEEEECSCCTTCCEEEECTTCCEEEETTEECSC--CTTEEEEEECSSEEEEEECSCCG-GGCEEE
T ss_pred ecCCceEEEEcCCCEEEEEEEcCCCCcEEEEECCCCcEEEECCceecc--cCCEEEecCCCCeEEEEECCCCh-hhCEEE
Confidence 345566788999999999999888888999994 322222 24555432222345699999998 999999
Q ss_pred EEEeeeCCCceEeeEEEEEEecCCCCC
Q psy2442 85 ECVAENGVGDAVSAEASLTVYEGEEKP 111 (111)
Q Consensus 85 ~c~~~~~~~~~~~~~~~l~~~~~~~~p 111 (111)
.|.+.|. +. ......|.|..+|.+|
T Consensus 119 ~C~~~n~-~~-~~~~~~L~V~~~P~~P 143 (145)
T 1z9m_A 119 TCSIFTM-PV-RTAKSLVTVLGIPQKP 143 (145)
T ss_dssp EEEECSS-SC-EEEEEEEEEECCCC--
T ss_pred EEEEEcC-CC-ceEEEEEEEEeCCCCC
Confidence 9999998 76 4788889998888766
No 73
>2iep_A Muscle-specific kinase receptor; beta-sandwich, signaling protein,transferase; 2.21A {Rattus norvegicus}
Probab=99.56 E-value=4.5e-14 Score=76.74 Aligned_cols=94 Identities=33% Similarity=0.555 Sum_probs=71.7
Q ss_pred cCCCeeEEcCcceeeecCCcEEEEEEEeccCCCeEEEEECCeeccCCCCceEEEeCCCCCeEEEEccCCCCCCCeEEEEE
Q psy2442 8 LDPPEITLRPRNQAVKAGGITSFYCIARGDPIPVIQWRKNGKRVSGTQSRYMVQEFPPGGSLLRIEPVRHARDDAVYECV 87 (111)
Q Consensus 8 ~~~p~~~~~~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~g~y~c~ 87 (111)
..+|.+...+..+.+..|+.+.|.|...+.+.+.+.|++++..+.....++.... ....|.+.++.. .|.|.|.|.
T Consensus 5 ~~~P~i~~~~~~~~~~~G~~v~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~---~~~~L~i~~~~~-~d~G~Y~C~ 80 (192)
T 2iep_A 5 PKAPVITTPLETVDALVEEVATFMCAVESYPQPEISWTRNKILIKLFDTRYSIRE---NGQLLTILSVED-SDDGIYCCT 80 (192)
T ss_dssp CEEEEESSCCCEEEEETTSCEEEECCEEEESCCEEEEEETTEECCTTCTTEEEEG---GGTEEEESSCCG-GGCEEEEEE
T ss_pred CCCceeecCccceeeeCCCcEEEEeeCCCCCCCeEEEEECCEEccccCccEEEcC---CccEEEEcCCCc-ccCeEEEEE
Confidence 3456666666677889999999999999988889999999998865445665543 334589999998 999999999
Q ss_pred eeeCCCceEeeEEEEEEe
Q psy2442 88 AENGVGDAVSAEASLTVY 105 (111)
Q Consensus 88 ~~~~~~~~~~~~~~l~~~ 105 (111)
+.|..|........+.+.
T Consensus 81 ~~~~~~~~~~~~~~l~v~ 98 (192)
T 2iep_A 81 ANNGVGGAVESCGALQVK 98 (192)
T ss_dssp EECSSSCCEEEEEEEEEE
T ss_pred EEcCCCceeEeEEEEEEE
Confidence 999876533444444443
No 74
>3p3y_A Neurofascin; IG domains, cell adhesion; HET: NAG; 2.60A {Homo sapiens} PDB: 3p40_A*
Probab=99.56 E-value=8e-14 Score=83.22 Aligned_cols=98 Identities=26% Similarity=0.400 Sum_probs=76.7
Q ss_pred eeEEecCCCeeEEcCcceeeecCCcEEEEEEEeccCCCeEEEEECCeeccCCCCceEEEeCCCCCeEEEEccCCCCCCCe
Q psy2442 3 RKVRFLDPPEITLRPRNQAVKAGGITSFYCIARGDPIPVIQWRKNGKRVSGTQSRYMVQEFPPGGSLLRIEPVRHARDDA 82 (111)
Q Consensus 3 ~~l~v~~~p~~~~~~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~g 82 (111)
+.|.|..+|.+...+....+..|+.+.|.|.+.+.|.+.+.|++++..+........... ....|.+.++.. .|.|
T Consensus 305 ~~l~V~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~---~~~~L~i~~v~~-~d~G 380 (404)
T 3p3y_A 305 ISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQWMVNGEPLQSAPPNPNREV---AGDTIIFRDTQI-SSRA 380 (404)
T ss_dssp EEEEEEEEEEEEECCCCEEECTTCCEEEECEEEEESCCEEEEEETTEEGGGSCCCTTEEE---ETTEEEESSCCS-SCCC
T ss_pred EEEEEeCCCeeeccCCcceeecCCcEEEEEEccccCCCceEEEECCEecCCCCCCceEEe---cCCEEEEeecCH-HHCE
Confidence 456777788887777778888999999999999999999999999998864321111111 223599999998 9999
Q ss_pred EEEEEeeeCCCceEeeEEEEEEe
Q psy2442 83 VYECVAENGVGDAVSAEASLTVY 105 (111)
Q Consensus 83 ~y~c~~~~~~~~~~~~~~~l~~~ 105 (111)
.|.|.+.|..|.. ...+.|.|.
T Consensus 381 ~Y~C~a~N~~G~~-~~~~~l~V~ 402 (404)
T 3p3y_A 381 VYQCNTSNEHGYL-LANAFVSVL 402 (404)
T ss_dssp EEEEEEEETTEEE-EEEEEEEEC
T ss_pred EEEEEEEeCCCcE-EEEEEEEEE
Confidence 9999999999874 677777664
No 75
>2a38_A Titin; Z1Z2, structural protein; 2.00A {Homo sapiens} PDB: 1ya5_A 2f8v_A
Probab=99.56 E-value=2.3e-13 Score=73.99 Aligned_cols=97 Identities=23% Similarity=0.372 Sum_probs=72.8
Q ss_pred eEEec---CCCeeEEcCcceeeecCCcEEEEEEEeccCCCeEEEEECCeeccCCCCceEEEeCCCCCeEEEEccCCCCCC
Q psy2442 4 KVRFL---DPPEITLRPRNQAVKAGGITSFYCIARGDPIPVIQWRKNGKRVSGTQSRYMVQEFPPGGSLLRIEPVRHARD 80 (111)
Q Consensus 4 ~l~v~---~~p~~~~~~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d 80 (111)
.|.|. .+|.+...+....+..|+.+.|.|.+.+.|.+.+.|++++..+... .++...... ....|.+..+.. .|
T Consensus 94 ~l~v~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~-~~~~~~~~~-~~~~L~i~~~~~-~d 170 (194)
T 2a38_A 94 ELLVKAETAPPNFVQRLQSMTVRQGSQVRLQVRVTGIPTPVVKFYRDGAEIQSS-LDFQISQEG-DLYSLLIAEAYP-ED 170 (194)
T ss_dssp EEEEECCCEEEEEEECCCCEEECTTEEEEEEEEEEEESCCEEEEEETTEECCCS-SSEEEEEET-TEEEEEEEEECG-GG
T ss_pred EEEEccCCCCCEEEeCCccEEEcCCCEEEEEEEEEEecCCeEEEEECCEECCCC-CcEEEEEcC-CEEEEEECCCCh-hc
Confidence 45555 3555555666677889999999999999999999999999988643 444443211 333588999998 99
Q ss_pred CeEEEEEeeeCCCceEeeEEEEEE
Q psy2442 81 DAVYECVAENGVGDAVSAEASLTV 104 (111)
Q Consensus 81 ~g~y~c~~~~~~~~~~~~~~~l~~ 104 (111)
.|.|.|.+.|..|.. ...+.|.|
T Consensus 171 ~G~Y~C~a~n~~g~~-~~~~~l~V 193 (194)
T 2a38_A 171 SGTYSVNATNSVGRA-TSTAELLV 193 (194)
T ss_dssp CEEEEEEEEETTEEE-EEEEEEEE
T ss_pred CeEEEEEEEeCCCce-EEEEEEEE
Confidence 999999999998864 66666654
No 76
>3so5_A LIG-3, leucine-rich repeats and immunoglobulin-like DOMA protein 3; structural genomics, joint center for struct genomics, JCSG; HET: MLY MSE; 1.70A {Mus musculus}
Probab=99.56 E-value=3.8e-13 Score=67.22 Aligned_cols=96 Identities=24% Similarity=0.453 Sum_probs=68.4
Q ss_pred ecCCCeeEEcCcceeeecCCcEEEEEEEecc--CCCeEEEEECCeeccCCCCceEEEeCCCC-------CeEEEEccCCC
Q psy2442 7 FLDPPEITLRPRNQAVKAGGITSFYCIARGD--PIPVIQWRKNGKRVSGTQSRYMVQEFPPG-------GSLLRIEPVRH 77 (111)
Q Consensus 7 v~~~p~~~~~~~~~~~~~g~~~~l~c~~~~~--~~~~~~w~~~~~~~~~~~~~~~~~~~~~~-------~~~l~~~~~~~ 77 (111)
...+|.+...+....+..|+.++|.|.+.+. +.+.+.|++++..+..... ......... ...|.|.++..
T Consensus 7 ~~~~P~i~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~i~W~k~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~L~I~~v~~ 85 (112)
T 3so5_A 7 DFPXPQITVQPETQSAIXGSDVSFTCSAASSSDSPMTFAWXXDNEALQDAEM-ENYAHLRAQGGELMEYTTILRLRNVEF 85 (112)
T ss_dssp -CCSCEEEECCCCEEECTTCCEEEEEEEEESCCCCCEEEEEETTEECTTCEE-EEEEETTGGGSSCEEEEEEEEECSCCG
T ss_pred CCCCCeEEeCCCCcEEECCCCEEEEEEEecCCCCCEEEEEccCCcccccccc-cceeeeeccCCCccccceEEEEecccc
Confidence 3467888888888889999999999999854 4568999999988754211 000010001 24599999998
Q ss_pred CCCCeEEEEEeeeCCCceEeeEEEEEE
Q psy2442 78 ARDDAVYECVAENGVGDAVSAEASLTV 104 (111)
Q Consensus 78 ~~d~g~y~c~~~~~~~~~~~~~~~l~~ 104 (111)
.|.|.|.|.+.|..|...+....|.|
T Consensus 86 -~D~G~Y~C~a~n~~g~~~s~~~~l~V 111 (112)
T 3so5_A 86 -TSEGXYQCVISNHFGSSYSVXAXLTI 111 (112)
T ss_dssp -GGCEEEEEEEEETTEEEECCCEEEEE
T ss_pred -ccCCeEEEEEEeCCCcEEEeEEEEEe
Confidence 99999999999988763345555554
No 77
>2lvc_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=99.56 E-value=6.9e-14 Score=68.09 Aligned_cols=78 Identities=15% Similarity=0.260 Sum_probs=57.6
Q ss_pred CCeeEEcCcce--eeecCCcEEEEEEEeccCCCeEEEEECCeeccCCCCceEEEeCCCCCeEEEEccCCCCCCCeEEEEE
Q psy2442 10 PPEITLRPRNQ--AVKAGGITSFYCIARGDPIPVIQWRKNGKRVSGTQSRYMVQEFPPGGSLLRIEPVRHARDDAVYECV 87 (111)
Q Consensus 10 ~p~~~~~~~~~--~~~~g~~~~l~c~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~g~y~c~ 87 (111)
|+.+..+.... .+..|+.+.|.|.+.+ |.+.+.|+++|..+... .++.+.... ....|.|.++.. .|+|.|.|.
T Consensus 4 P~~i~~p~~~~~v~~~~g~~v~l~C~v~~-p~~~v~W~k~g~~i~~~-~~~~i~~~~-~~~~L~I~~v~~-~D~G~Y~C~ 79 (91)
T 2lvc_A 4 PVHIVDPREHVFVHAITSECVMLACEVDR-EDAPVRWYKDGQEVEES-DFVVLENEG-PHRRLVLPATQP-SDGGEFQCV 79 (91)
T ss_dssp CCCCCBCCSCEEEECCTTCCEEEEEECSC-TTSCCEEEETTSCCCCC-SSCEEEEET-TEEEEEESSCCG-GGCSEEEEE
T ss_pred CcEEeccCCCeEEEEECCCcEEEEEEECC-CCcEEEEEECCEEeeee-eeeeEEecC-CeEEEEeCCCCh-hhcEEEEEE
Confidence 45554444443 4457999999999866 77789999999988654 555554322 334599999998 999999999
Q ss_pred eeeC
Q psy2442 88 AENG 91 (111)
Q Consensus 88 ~~~~ 91 (111)
+.|.
T Consensus 80 a~n~ 83 (91)
T 2lvc_A 80 AGDE 83 (91)
T ss_dssp CSSC
T ss_pred Ecce
Confidence 8664
No 78
>3lcy_A Titin; A-BAND, IG tandem domains, ATP-binding, calmodulin-BI cardiomyopathy, disease mutation, disulfide bond, immunoglo domain, isopeptide bond; 2.50A {Homo sapiens}
Probab=99.56 E-value=2.4e-13 Score=74.02 Aligned_cols=95 Identities=24% Similarity=0.479 Sum_probs=73.2
Q ss_pred cCCCeeEEcCcceeeecCCcEEEEEEEeccCCCeEEEEECCeeccCCCCceEEEeCCCCCeEEEEccCCCCCCCeEEEEE
Q psy2442 8 LDPPEITLRPRNQAVKAGGITSFYCIARGDPIPVIQWRKNGKRVSGTQSRYMVQEFPPGGSLLRIEPVRHARDDAVYECV 87 (111)
Q Consensus 8 ~~~p~~~~~~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~g~y~c~ 87 (111)
..+|.+...+..+.+..|+.+.|.|.+.+.|.+.+.|++++..+... .++...... ....|.|.++.. .|.|.|.|.
T Consensus 5 ~~~P~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~-~~~~~~~~~-~~~~L~i~~~~~-~d~G~Y~C~ 81 (197)
T 3lcy_A 5 GEAPGIRKEMKDVTTKLGEAAQLSCQIVGRPLPDIKWYRFGKELIQS-RKYKMSSDG-RTHTLTVMTEEQ-EDEGVYTCI 81 (197)
T ss_dssp CEEEEEEECCCCEEEETTSEEEEEEEEEEESCCEEEEEETTEEECCC-SSEEEEESS-SEEEEEEECCSG-GGCEEEEEE
T ss_pred CCCCcccccCCceEEeCCCcEEEEEEEecCCCCEEEEEECCEECCCC-ccEEEEeCC-CEEEEEEecCCc-cCCEEEEEE
Confidence 45677777788888999999999999999888899999999887543 455444321 333599999998 999999999
Q ss_pred eeeCCCceEeeEEEEEEec
Q psy2442 88 AENGVGDAVSAEASLTVYE 106 (111)
Q Consensus 88 ~~~~~~~~~~~~~~l~~~~ 106 (111)
+.|..+.. .....+.+..
T Consensus 82 ~~n~~~~~-~~~~~l~v~~ 99 (197)
T 3lcy_A 82 ATNEVGEV-ETSSKLLLQA 99 (197)
T ss_dssp EECSSCEE-EEEEEEEEEE
T ss_pred EECCCCce-eEEEEEEEEc
Confidence 99887763 5555555543
No 79
>3qr2_A Basigin; CD147, EMMPRIN, immunoglobulin-like domain, beta sheet, STRU genomics, berkeley structural genomics center, BSGC, cell A; 2.30A {Homo sapiens} PDB: 3qqn_A
Probab=99.55 E-value=4.6e-13 Score=69.61 Aligned_cols=87 Identities=25% Similarity=0.406 Sum_probs=64.4
Q ss_pred ecCCCeeEEcCcceeeecCCcEEEEEEEeccCCCeEEEEECCeeccCC---------CCceEEEe--CCCCCeEEEEccC
Q psy2442 7 FLDPPEITLRPRNQAVKAGGITSFYCIARGDPIPVIQWRKNGKRVSGT---------QSRYMVQE--FPPGGSLLRIEPV 75 (111)
Q Consensus 7 v~~~p~~~~~~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~~~~~~~~---------~~~~~~~~--~~~~~~~l~~~~~ 75 (111)
...+|.+...+..+.+..|+++.|.|.+.+.|.+.+.|++++..+... ..++.... .......|.|.++
T Consensus 18 ~~~pP~~~~~p~~~~v~~G~~v~L~C~~~g~P~p~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v 97 (137)
T 3qr2_A 18 GSHMAGFVQAPLSQQRWVGGSVELHCEAVGSPVPEIQWWFEGQGPNDICSQLWDGARLDRVHIHATYHQHAASTISIDTL 97 (137)
T ss_dssp ---CCEEEECCCCEEEETTSCEEEEEEEECSSCCEEEEEEEESSTTCCCEECCTTHHHHTEEEEEEESSSEEEEEEECSC
T ss_pred CCCCCeEEcCCCCEEEeCCCCEEEEEEEeeecCCeEEEEECCCCccccceeecccCcccceEEecccccccceEEEECCC
Confidence 456889988888889999999999999999999999999976654321 11222211 0112345999999
Q ss_pred CCCCCCeEEEEEeeeCCCc
Q psy2442 76 RHARDDAVYECVAENGVGD 94 (111)
Q Consensus 76 ~~~~d~g~y~c~~~~~~~~ 94 (111)
.. .|.|.|.|.+.|..|.
T Consensus 98 ~~-~D~G~Y~C~a~N~~G~ 115 (137)
T 3qr2_A 98 VE-EDTGTYECRASNDPDR 115 (137)
T ss_dssp CG-GGCEEEEEEEECCTTS
T ss_pred Cc-ccCEEEEEEEEecCCc
Confidence 98 9999999999998875
No 80
>3r4d_A CEA-related cell adhesion molecule 1, isoform 1/2; immunoglobulin, beta-sandwich, mceacam1A - immunoglobulin FO spike NTD - galectin-like beta-sandwich fold; HET: NAG; 3.10A {Mus musculus} PDB: 1l6z_A*
Probab=99.55 E-value=1.8e-13 Score=75.24 Aligned_cols=98 Identities=23% Similarity=0.404 Sum_probs=71.6
Q ss_pred eEEecCC---CeeEEcCcceeeecCCcEEEEEEEeccCCCeEEEEECCeeccCCCCceEEEeCCCCCeEEEEccCCCCCC
Q psy2442 4 KVRFLDP---PEITLRPRNQAVKAGGITSFYCIARGDPIPVIQWRKNGKRVSGTQSRYMVQEFPPGGSLLRIEPVRHARD 80 (111)
Q Consensus 4 ~l~v~~~---p~~~~~~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d 80 (111)
.|.|..+ |.+...... +..|+.+.|.|.+.+.+ +.+.|++++..+... .++.... ....|.+..+.. .|
T Consensus 103 ~l~V~~~~~~p~i~~~~~~--~~~g~~v~l~C~~~~~p-p~i~W~~~g~~l~~~-~~~~~~~---~~~~L~i~~v~~-~d 174 (208)
T 3r4d_A 103 RFHVHQPVTQPFLQVTNTT--VKELDSVTLTCLSNDIG-ANIQWLFNSQSLQLT-ERMTLSQ---NNSILRIDPIKR-ED 174 (208)
T ss_dssp EEEEECCCCCCEEEESCSS--CCTTCCEEEEEECSCTT-CEEEEEETTEECCCC-SSEEEET---TTTEEEESSCCG-GG
T ss_pred EEEeccCCCCCEEecCCce--EeeCCCEEEEEECCCCC-CceEEEECCEeCCCC-CCeEEcC---CCCEEEEeccCH-Hh
Confidence 4556544 444443333 77899999999998865 799999999988643 4554443 335699999998 99
Q ss_pred CeEEEEEeeeCCCceEeeEEEEEEecCCC
Q psy2442 81 DAVYECVAENGVGDAVSAEASLTVYEGEE 109 (111)
Q Consensus 81 ~g~y~c~~~~~~~~~~~~~~~l~~~~~~~ 109 (111)
.|.|.|.+.|..|...+..+.|.+..++.
T Consensus 175 ~G~Y~C~a~N~~g~~~s~~~~l~v~~~~~ 203 (208)
T 3r4d_A 175 AGEYQCEISNPVSVRRSNSIKLDIIFDPH 203 (208)
T ss_dssp CEEEEEEEECTTCCEECCCEEECCC----
T ss_pred CeEEEEEEecCCCcccCCceeeeEEeCCc
Confidence 99999999999998767788887776654
No 81
>2e7b_A Obscurin; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yz8_A
Probab=99.55 E-value=1.3e-13 Score=68.36 Aligned_cols=92 Identities=21% Similarity=0.381 Sum_probs=67.9
Q ss_pred CCCeeEEcCcceeeecCCcEEEEEEEeccCCCeEEEEECCeeccCCCCceEEEeCCCCCeEEEEccCCCCCCCeEEEEEe
Q psy2442 9 DPPEITLRPRNQAVKAGGITSFYCIARGDPIPVIQWRKNGKRVSGTQSRYMVQEFPPGGSLLRIEPVRHARDDAVYECVA 88 (111)
Q Consensus 9 ~~p~~~~~~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~g~y~c~~ 88 (111)
.+|.+...+..+.+..|+++.|.|.+.+.+.+ +.|++++..+... .++.+.... ....|.|.++.. .|+|.|.|.+
T Consensus 7 ~pp~~~~~~~~~~v~~G~~v~l~C~~~~~p~~-v~W~k~~~~l~~~-~~~~~~~~~-~~~~L~I~~v~~-~D~G~Y~C~~ 82 (103)
T 2e7b_A 7 GPVRFQEALKDLEVLEGGAATLRCVLSSVAAP-VKWCYGNNVLRPG-DKYSLRQEG-AMLELVVRNLRP-QDSGRYSCSF 82 (103)
T ss_dssp CCCCCTBCCCCEEEESSSCEEEEEECSSCCCS-CEEEESSSBCCCS-SSEEEEECS-SEEEEEECSCCT-TTCCCEEEEC
T ss_pred CCCEEEecCccEEEECCCcEEEEEEEeCCCCC-eEEEECCEECCCC-CcEEEEEcC-CEEEEEEccCCc-ccCEEEEEEE
Confidence 35666666777889999999999999998888 9999998887543 455555322 334599999998 9999999983
Q ss_pred eeCCCceEeeEEEEEEecCCC
Q psy2442 89 ENGVGDAVSAEASLTVYEGEE 109 (111)
Q Consensus 89 ~~~~~~~~~~~~~l~~~~~~~ 109 (111)
|.. .....|.|..+|.
T Consensus 83 ----g~~-~~~~~l~V~~~p~ 98 (103)
T 2e7b_A 83 ----GDQ-TTSATLTVTALPS 98 (103)
T ss_dssp ----SSC-BCCBCEEEECCCC
T ss_pred ----CCc-EEEEEEEEEeccc
Confidence 332 4455666666653
No 82
>1epf_A NCAM, protein (neural cell adhesion molecule); immunoglobulin fold, glycoprotein; 1.85A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 PDB: 2ncm_A 3ncm_A
Probab=99.54 E-value=3.6e-13 Score=73.12 Aligned_cols=87 Identities=21% Similarity=0.386 Sum_probs=70.0
Q ss_pred eeEEecCCCeeEEcCcceeeecCCcEEEEEEEeccCCCeEEEEECCeeccCC-CCceEEEeCCCCCeEEEEccCCCCCCC
Q psy2442 3 RKVRFLDPPEITLRPRNQAVKAGGITSFYCIARGDPIPVIQWRKNGKRVSGT-QSRYMVQEFPPGGSLLRIEPVRHARDD 81 (111)
Q Consensus 3 ~~l~v~~~p~~~~~~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~d~ 81 (111)
+.|.|..+|.+...+....+..|+.+.|.|.+.+.|.+.+.|++++..+... ..++... ....|.+..+.. .|.
T Consensus 93 ~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~----~~~~L~i~~~~~-~d~ 167 (191)
T 1epf_A 93 VNVKIFQKLMFKNAPTPQEFKEGEDAVIVCDVVSSLPPTIIWKHKGRDVILKKDVRFIVL----SNNYLQIRGIKK-TDE 167 (191)
T ss_dssp EEEEEECCSEEEECCSSEECCTTSCEEECCEEECSSCCEEEEEETTEEGGGGCCTTEEEC----TTSCEEETTCCG-GGC
T ss_pred EEEEeecCceEecCCCcEeecCCCeEEEEEEECCCCCCEEEEEECCEEeeccCCceEEEe----cCCeEEECCCCh-hhC
Confidence 4567788888887777778889999999999999999999999999987532 2344333 233499999998 999
Q ss_pred eEEEEEeeeCCCc
Q psy2442 82 AVYECVAENGVGD 94 (111)
Q Consensus 82 g~y~c~~~~~~~~ 94 (111)
|.|.|.+.|..+.
T Consensus 168 G~Y~C~a~n~~~~ 180 (191)
T 1epf_A 168 GTYRCEGRILARG 180 (191)
T ss_dssp EEEEEEEEEGGGT
T ss_pred EEEEEEEEEecce
Confidence 9999999998754
No 83
>2j8h_A Titin, connectin; cardiomyopathy, nuclear protein, serine/threonine-protein KI LIMB-girdle muscular dystrophy, phosphorylation; 1.99A {Homo sapiens} PDB: 2j8o_A 2ill_A
Probab=99.54 E-value=1.8e-13 Score=74.69 Aligned_cols=98 Identities=23% Similarity=0.299 Sum_probs=71.8
Q ss_pred eEEecCCCeeEEc-----CcceeeecCCcEEEEEEEeccCCCeEEEEECCeeccCCCCceEEEeCCCCCeEEEEcc-CCC
Q psy2442 4 KVRFLDPPEITLR-----PRNQAVKAGGITSFYCIARGDPIPVIQWRKNGKRVSGTQSRYMVQEFPPGGSLLRIEP-VRH 77 (111)
Q Consensus 4 ~l~v~~~p~~~~~-----~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~ 77 (111)
.|.|..+|.+... +....+..|+.+.|.|.+.+.|.+.+.|++++..+... .++...... ....|.+.. +..
T Consensus 93 ~l~V~~~p~~~~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~~-~~~~~~~~~-~~~~L~i~~~~~~ 170 (197)
T 2j8h_A 93 SLEVEVPAKIHLPKTLEGMGAVHALRGEVVSIKIPFSGKPDPVITWQKGQDLIDNN-GHYQVIVTR-SFTSLVFPNGVER 170 (197)
T ss_dssp EEEEEEEEEECCSSCBTTBEEEEEETTCCCEEEEEEEEESCCEEEEEESSCEECSS-SSCEEEECS-SEEEEECTTCCCG
T ss_pred EEEEcCCCcCCCCccccccCeEEEeCCCEEEEEEEEEecCCCcEEEEECCEEeecC-CCEEEEEcC-CceEEEEeCCCCc
Confidence 4555555444322 13356778999999999999999999999999887643 455544322 345588888 888
Q ss_pred CCCCeEEEEEeeeCCCceEeeEEEEEEe
Q psy2442 78 ARDDAVYECVAENGVGDAVSAEASLTVY 105 (111)
Q Consensus 78 ~~d~g~y~c~~~~~~~~~~~~~~~l~~~ 105 (111)
.|.|.|.|.+.|..|.. ...+.|.|.
T Consensus 171 -~d~G~Y~C~a~N~~g~~-~~~~~l~V~ 196 (197)
T 2j8h_A 171 -KDAGFYVVCAKNRFGID-QKTVELDVA 196 (197)
T ss_dssp -GGCEEEEEEEEETTEEE-EEEEEEEEE
T ss_pred -ccCEeEEEEEEeCCCcE-eEEEEEEEe
Confidence 99999999999999874 777777664
No 84
>2v44_A NCAM2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, IG, membrane, homphilic, glycoprotein, transmembrane; 1.77A {Homo sapiens} PDB: 2xy2_A* 2vaj_A
Probab=99.54 E-value=3.6e-13 Score=73.07 Aligned_cols=87 Identities=16% Similarity=0.344 Sum_probs=67.2
Q ss_pred eeEEecCCCeeEEcCcceeeecCCcEEEEEEEeccCCCeEEEEECCeeccC-CCCceEEEeCCCCCeEEEEccCCCCCCC
Q psy2442 3 RKVRFLDPPEITLRPRNQAVKAGGITSFYCIARGDPIPVIQWRKNGKRVSG-TQSRYMVQEFPPGGSLLRIEPVRHARDD 81 (111)
Q Consensus 3 ~~l~v~~~p~~~~~~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~d~ 81 (111)
..|.|..+|.+...+....+..|+.+.|.|.+.+.|.+.+.|++++..+.. ...++... ....|.+.++.. .|.
T Consensus 89 ~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~----~~~~L~i~~v~~-~d~ 163 (189)
T 2v44_A 89 VVLEIYQKLTFREVVSPQEFKQGEDAEVVCRVSSSPAPAVSWLYHNEEVTTISDNRFAML----ANNNLQILNINK-SDE 163 (189)
T ss_dssp EEEEEECCCEEESCCCSEEEETTSCEEECCEEECSSCCEEEEEEEC--CEECCCTTEEEC----TTSCEEETTCCG-GGC
T ss_pred EEEEEecCCceeecCCcEEEeCCCCEEEEEEECcCCCCcEEEEECCcEEeccCCCCEEEe----cCCcEEEEEcCc-ccC
Confidence 456777788777666667788999999999999999999999999887642 22444443 233599999998 999
Q ss_pred eEEEEEeeeCCCc
Q psy2442 82 AVYECVAENGVGD 94 (111)
Q Consensus 82 g~y~c~~~~~~~~ 94 (111)
|.|.|.+.|..+.
T Consensus 164 G~Y~C~a~n~~~~ 176 (189)
T 2v44_A 164 GIYRCEGRVEARG 176 (189)
T ss_dssp EEEEEEEEETTTT
T ss_pred eEEEEEEEccccC
Confidence 9999999998865
No 85
>2k1m_A Myosin-binding protein C, cardiac-type; IG-I domain, cardiac muscle, hypertrophic cardiomyopathy, actin-binding, cell adhesion, disease mutation; NMR {Homo sapiens}
Probab=99.54 E-value=4e-13 Score=65.71 Aligned_cols=86 Identities=21% Similarity=0.375 Sum_probs=63.4
Q ss_pred CeeEEcCcceeeecCCcEEEEEEEeccCCCeEEEEECCeeccCCCCceEEEeCCCCCeEEEEccCCCCCCCeEEEEEeee
Q psy2442 11 PEITLRPRNQAVKAGGITSFYCIARGDPIPVIQWRKNGKRVSGTQSRYMVQEFPPGGSLLRIEPVRHARDDAVYECVAEN 90 (111)
Q Consensus 11 p~~~~~~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~g~y~c~~~~ 90 (111)
+.+...+..+.+..|+.+.|.|.+ +.+.+.+.|++++..+... .++.+.... ....|.|.++.. .|.|.|.|.+
T Consensus 9 ~~~~~~~~~~~v~~G~~v~l~C~~-~~p~~~v~W~k~~~~l~~~-~~~~~~~~~-~~~~L~I~~v~~-~D~G~Y~C~a-- 82 (95)
T 2k1m_A 9 SAFSKKPRSVEVAAGSPAVFEAET-ERAGVKVRWQRGGSDISAS-NKYGLATEG-TRHTLTVREVGP-ADQGSYAVIA-- 82 (95)
T ss_dssp CCCSBCCCCEEEETTSCEEEEEEC-SSSSCCCEEECSSSEECSS-TTCEEEEET-TEEEEEESSCCT-TCCSEEEEEE--
T ss_pred CeeEeCCCcEEEeCCCcEEEEEEe-CCCCCeEEEEECCEECCCC-CcEEEEEcC-CEEEEEEcCCCc-ccCEEEEEEE--
Confidence 455556677889999999999999 7777899999999887643 455444311 334599999998 9999999998
Q ss_pred CCCceEeeEEEEEEe
Q psy2442 91 GVGDAVSAEASLTVY 105 (111)
Q Consensus 91 ~~~~~~~~~~~l~~~ 105 (111)
|.. .....|.|.
T Consensus 83 --g~~-~~~~~l~V~ 94 (95)
T 2k1m_A 83 --GSS-KVKFDLKVI 94 (95)
T ss_dssp --TTE-EEEEEEEEE
T ss_pred --CCc-eEEEEEEEe
Confidence 332 445556553
No 86
>1cs6_A Axonin-1; neural cell adhesion, cell adhesion; 1.80A {Gallus gallus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4 PDB: 2om5_A
Probab=99.54 E-value=2.7e-13 Score=80.57 Aligned_cols=95 Identities=28% Similarity=0.522 Sum_probs=77.2
Q ss_pred eeEEecCCCeeEEcCcceeeecCCcEEEEEEEeccCCCeEEEEECCeeccCCCCceEEEeCCCCCeEEEEccCCCCCCCe
Q psy2442 3 RKVRFLDPPEITLRPRNQAVKAGGITSFYCIARGDPIPVIQWRKNGKRVSGTQSRYMVQEFPPGGSLLRIEPVRHARDDA 82 (111)
Q Consensus 3 ~~l~v~~~p~~~~~~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~g 82 (111)
+.|.|..+|.+...+....+..|+.+.|.|.+.+.|.+.+.|++++..+... .++... ...|.|.++.. .|.|
T Consensus 287 ~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~g~~~~~~-~~~~~~-----~~~L~i~~v~~-~d~G 359 (382)
T 1cs6_A 287 GRIIIHAQPDWLDVITDTEADIGSDLRWSCVASGKPRPAVRWLRDGQPLASQ-NRIEVS-----GGELRFSKLVL-EDSG 359 (382)
T ss_dssp EEEEEEEEEEEEECCCCEEEETTCCEEEECEEEEESCCEEEEEETTEECCCC-SSEEEE-----TTEEEESSCCG-GGCE
T ss_pred EEEEEecCCCcccCCCccEEcCCCeEEEEEEeeeecCCEEEEEECCEECCCC-ceEEEE-----CCEEEECcCCc-ccCE
Confidence 4567777888877777778889999999999999999999999999988644 455442 23599999998 9999
Q ss_pred EEEEEeeeCCCceEeeEEEEEEe
Q psy2442 83 VYECVAENGVGDAVSAEASLTVY 105 (111)
Q Consensus 83 ~y~c~~~~~~~~~~~~~~~l~~~ 105 (111)
.|.|.+.|..|.. ...+.|.|.
T Consensus 360 ~Y~C~a~N~~G~~-~~~~~l~V~ 381 (382)
T 1cs6_A 360 MYQCVAENKHGTV-YASAELTVQ 381 (382)
T ss_dssp EEEEEEEETTEEE-EEEEEEEEE
T ss_pred EEEEEEEeCCCeE-EEEEEEEEe
Confidence 9999999999875 667777664
No 87
>2a38_A Titin; Z1Z2, structural protein; 2.00A {Homo sapiens} PDB: 1ya5_A 2f8v_A
Probab=99.54 E-value=2.4e-13 Score=73.94 Aligned_cols=94 Identities=26% Similarity=0.408 Sum_probs=71.2
Q ss_pred CCCeeEEcCcceeeecCCcEEEEEEEeccCCCeEEEEECCeeccCCC-CceEEEeCCCCCeEEEEccCCCCCCCeEEEEE
Q psy2442 9 DPPEITLRPRNQAVKAGGITSFYCIARGDPIPVIQWRKNGKRVSGTQ-SRYMVQEFPPGGSLLRIEPVRHARDDAVYECV 87 (111)
Q Consensus 9 ~~p~~~~~~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~d~g~y~c~ 87 (111)
.+|.+...+....+..|+.+.|.|.+.+.+.+.+.|++++..+.... .++...... ....|.|.++.. .|.|.|.|.
T Consensus 4 ~~P~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~-~~~~L~i~~~~~-~d~G~Y~C~ 81 (194)
T 2a38_A 4 QAPTFTQPLQSVVVLEGSTATFEAHISGFPVPEVSWFRDGQVISTSTLPGVQISFSD-GRAKLTIPAVTK-ANSGRYSLK 81 (194)
T ss_dssp EEEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEESSSBCCTTTSTTCEEEEET-TEEEEEESSCCG-GGCEEEEEE
T ss_pred CCCeEEccCCceEEECCCEEEEEEEEEecCCCEEEEEECCEEcccccCCceEEEeCC-CEEEEEECCCCc-ccCEEEEEE
Confidence 35677777777889999999999999998988999999988875432 233332222 345699999998 999999999
Q ss_pred eeeCCCceEeeEEEEEEe
Q psy2442 88 AENGVGDAVSAEASLTVY 105 (111)
Q Consensus 88 ~~~~~~~~~~~~~~l~~~ 105 (111)
+.|..+.. .....+.+.
T Consensus 82 ~~n~~~~~-~~~~~l~v~ 98 (194)
T 2a38_A 82 ATNGSGQA-TSTAELLVK 98 (194)
T ss_dssp EEETTEEE-EEEEEEEEE
T ss_pred EEcCCceE-eEEEEEEEc
Confidence 99987653 555555554
No 88
>2wim_A N-CAM 2, NCAM2, neural cell adhesion molecule 2; cell membrane, transmembrane, immunoglobulin; HET: NDG NAG; 3.00A {Homo sapiens}
Probab=99.53 E-value=1.8e-13 Score=78.59 Aligned_cols=99 Identities=28% Similarity=0.549 Sum_probs=72.8
Q ss_pred eEEecCCCeeEEcCc--ceeeecCCcEEEEEEEeccCCCeEEEEECCeeccCCCCceEEEeCCCCCeEEEEccCCCCCCC
Q psy2442 4 KVRFLDPPEITLRPR--NQAVKAGGITSFYCIARGDPIPVIQWRKNGKRVSGTQSRYMVQEFPPGGSLLRIEPVRHARDD 81 (111)
Q Consensus 4 ~l~v~~~p~~~~~~~--~~~~~~g~~~~l~c~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~ 81 (111)
.+.|..+|.+..... ...+..|+.+.|.|.+.+.|.+.+.|++++..+... .++.... ....|.|..+.. .|.
T Consensus 186 ~~~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~g~~~~~~-~~~~~~~---~~~~L~i~~~~~-~d~ 260 (291)
T 2wim_A 186 IVIVNVPPAISMPQKSFNATAERGEEMTFSCRASGSPEPAISWFRNGKLIEEN-EKYILKG---SNTELTVRNIIN-SDG 260 (291)
T ss_dssp EEEEEBCCCCBCSCSEEECCSSSCCEEEEECBCCCBSCCEEEEEETTEECCCT-TTEEECS---TTCEEEEESCCS-TTC
T ss_pred EEEeccCCccccCcccccceecCCCeEEEEEEeecCCCCeEEEEECCEECcCC-ccEEEcC---CccEEEEeeCCc-ccC
Confidence 455666666654333 345678999999999999999999999999988643 3444332 345699999998 999
Q ss_pred eEEEEEeeeCCCceEeeEEEEEEecCC
Q psy2442 82 AVYECVAENGVGDAVSAEASLTVYEGE 108 (111)
Q Consensus 82 g~y~c~~~~~~~~~~~~~~~l~~~~~~ 108 (111)
|.|.|.+.|..|.. ...+.+.+..++
T Consensus 261 G~Y~C~a~N~~G~~-~~~~~l~v~~~~ 286 (291)
T 2wim_A 261 GPYVCRATNKAGED-EKQAFLQVFVQH 286 (291)
T ss_dssp EEEEEEEEETTEEE-EEEEEEEC----
T ss_pred EEEEEEEEECCCce-eeeEEEEEEEec
Confidence 99999999999875 777777766544
No 89
>2v5m_A Dscam; neurobiology SPL immunoglobulin domain, cell adhesion, membrane, development protein; HET: NAG; 1.95A {Drosophila melanogaster} PDB: 2v5s_A* 2v5r_A*
Probab=99.53 E-value=2.8e-13 Score=80.59 Aligned_cols=88 Identities=32% Similarity=0.593 Sum_probs=71.9
Q ss_pred eeEEecCCCeeEEcCcceeeecCCcEEEEEEEeccCCCeEEEEECCeeccCCCCceEEEeCCCCCeEEEEccCCCCCCCe
Q psy2442 3 RKVRFLDPPEITLRPRNQAVKAGGITSFYCIARGDPIPVIQWRKNGKRVSGTQSRYMVQEFPPGGSLLRIEPVRHARDDA 82 (111)
Q Consensus 3 ~~l~v~~~p~~~~~~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~g 82 (111)
+.|.|..+|.+...+....+..|+.+.|.|.+.+.|.+.+.|+++|..+.. ....|.|..+.. .|.|
T Consensus 300 ~~l~V~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~i~~------------~~~~L~i~~v~~-~d~G 366 (388)
T 2v5m_A 300 TVLTVTAPLSAKIDPPTQTVDFGRPAVFTCQYTGNPIKTVSWMKDGKAIGH------------SESVLRIESVKK-EDKG 366 (388)
T ss_dssp EEEEEEEEEEEEEESSEEEECTTSCEEEEEEEEEECCCEEEEEETTEECSC------------CSSEEEESSCCG-GGCE
T ss_pred EEEEEeCCCccccCCCcEEecCCCCEEEEEEeccccCCeEEEEECCEECcc------------CCCEEEEecCCh-hhCE
Confidence 456777777776667777888999999999999999999999999988753 233488999998 9999
Q ss_pred EEEEEeeeCCCceEeeEEEEEE
Q psy2442 83 VYECVAENGVGDAVSAEASLTV 104 (111)
Q Consensus 83 ~y~c~~~~~~~~~~~~~~~l~~ 104 (111)
.|.|.+.|..|.. ...+.|.|
T Consensus 367 ~Y~C~a~N~~G~~-~~~~~l~V 387 (388)
T 2v5m_A 367 MYQCFVRNDRESA-EASAELKL 387 (388)
T ss_dssp EEEEEEECSSCEE-EEEEEEEE
T ss_pred EEEEEEEcCCCcE-EEEEEEEe
Confidence 9999999999874 66666654
No 90
>2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens}
Probab=99.53 E-value=7.2e-13 Score=76.60 Aligned_cols=105 Identities=23% Similarity=0.305 Sum_probs=77.0
Q ss_pred eeEEecCCCeeEEc-----CcceeeecCCcEEEEEEEeccCCCeEEEEECCeeccCCCCceEEEeCCCCCeEEEEcc-CC
Q psy2442 3 RKVRFLDPPEITLR-----PRNQAVKAGGITSFYCIARGDPIPVIQWRKNGKRVSGTQSRYMVQEFPPGGSLLRIEP-VR 76 (111)
Q Consensus 3 ~~l~v~~~p~~~~~-----~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~ 76 (111)
+.|.|..+|.+... +....+..|+.+.|.|.+.+.|.+.+.|++++..+... .++...... ....|.+.+ +.
T Consensus 92 ~~l~V~~~p~~~~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~~-~~~~~~~~~-~~~~l~i~~~~~ 169 (305)
T 2nzi_A 92 ASLEVEVPAKIHLPKTLEGMGAVHALRGEVVSIKIPFSGKPDPVITWQKGQDLIDNN-GHYQVIVTR-SFTSLVFPNGVE 169 (305)
T ss_dssp EEEEECEEEEECCCHHHHSSCCEEEETTCCEEEEEEEEEESCCEEEEEESSSBCCSS-SSCEEEECS-SEEEEEETTCCC
T ss_pred EEEEEecCCccCCCccccccccEEecCCCEEEEEEEECCCCCCEEEEEECCEECCCC-CcEEEEEcC-CceEEEEecCCc
Confidence 34556555544322 23456778999999999999999999999998877543 444443322 335588888 88
Q ss_pred CCCCCeEEEEEeeeCCCceEeeEEEEEEecCCCCC
Q psy2442 77 HARDDAVYECVAENGVGDAVSAEASLTVYEGEEKP 111 (111)
Q Consensus 77 ~~~d~g~y~c~~~~~~~~~~~~~~~l~~~~~~~~p 111 (111)
. .|.|.|.|.+.|..|.. ...+.+.+...|.+|
T Consensus 170 ~-~d~G~Y~C~a~N~~G~~-~~~~~l~v~~~P~~p 202 (305)
T 2nzi_A 170 R-KDAGFYVVCAKNRFGID-QKTVELDVADVPDPP 202 (305)
T ss_dssp S-TTCEEEEEEEEETTEEE-EEEEEEEEEBCCCCC
T ss_pred c-CccEEEEEEEEeCCCce-eeEEEEEEecCCCCC
Confidence 8 99999999999999874 777888888777654
No 91
>1qz1_A Neural cell adhesion molecule 1, 140 kDa isoform; IG modules, NCAM; 2.00A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ie5_A
Probab=99.53 E-value=4.4e-13 Score=76.99 Aligned_cols=98 Identities=30% Similarity=0.563 Sum_probs=73.5
Q ss_pred eEEecCCCeeEEcCc--ceeeecCCcEEEEEEEeccCCCeEEEEECCeeccCCC---CceEEEeCCCCCeEEEEccCCCC
Q psy2442 4 KVRFLDPPEITLRPR--NQAVKAGGITSFYCIARGDPIPVIQWRKNGKRVSGTQ---SRYMVQEFPPGGSLLRIEPVRHA 78 (111)
Q Consensus 4 ~l~v~~~p~~~~~~~--~~~~~~g~~~~l~c~~~~~~~~~~~w~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~~~~~~ 78 (111)
.|.|..+|.+..... ...+..|+.+.|.|.+.+.|.+.+.|++++..+.... .++.... ....|.|.++..
T Consensus 188 ~l~v~~~p~~~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~g~~~~~~~~~~~~~~~~~---~~~~L~i~~v~~- 263 (291)
T 1qz1_A 188 QVIVNVPPTVQARQSIVNATANLGQSVTLVCDADGFPEPTMSWTKDGEPIENEEEDDEKHIFSD---DSSELTIRNVDK- 263 (291)
T ss_dssp EEEEEEEEEEEESCSEEEEETTSCCCEEEEEEEEEESCCEEEEEETTEECCCC--CCSSEEECT---TSCEEEECSCCG-
T ss_pred EEEEecCCcccccccccccccccCceEEEEEEEEEeCCCcEEEEECCEECcCCCCCCcceEEcC---CCcEEEEEecCh-
Confidence 455566666654432 3456789999999999999999999999999886432 2333322 345699999998
Q ss_pred CCCeEEEEEeeeCCCceEeeEEEEEEec
Q psy2442 79 RDDAVYECVAENGVGDAVSAEASLTVYE 106 (111)
Q Consensus 79 ~d~g~y~c~~~~~~~~~~~~~~~l~~~~ 106 (111)
.|.|.|.|.+.|..|.. ...+.|.|..
T Consensus 264 ~d~G~Y~C~a~N~~G~~-~~~~~l~V~~ 290 (291)
T 1qz1_A 264 NDEAEYVCIAENKAGEQ-DASIHLKVFA 290 (291)
T ss_dssp GGCEEEEEEEEETTEEE-EEEEEEEEEC
T ss_pred hcCEEEEEEEEeCCCce-EEEEEEEEEc
Confidence 99999999999999874 7777777754
No 92
>2v5t_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, membrane, glycoprote adhesion, transmembrane; HET: NAG; 2.00A {Homo sapiens}
Probab=99.53 E-value=4.3e-13 Score=72.60 Aligned_cols=95 Identities=29% Similarity=0.588 Sum_probs=70.4
Q ss_pred EEecCCCeeEEcCc--ceeeecCCcEEEEEEEeccCCCeEEEEECCeeccCCCCceEEEeCCCCCeEEEEccCCCCCCCe
Q psy2442 5 VRFLDPPEITLRPR--NQAVKAGGITSFYCIARGDPIPVIQWRKNGKRVSGTQSRYMVQEFPPGGSLLRIEPVRHARDDA 82 (111)
Q Consensus 5 l~v~~~p~~~~~~~--~~~~~~g~~~~l~c~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~g 82 (111)
+.|..+|.+..... ...+..|+.+.|.|.+.+.|.+.+.|++++..+... .++.... ....|.+..+.. .|.|
T Consensus 91 l~v~~~p~~~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~v~W~~~g~~~~~~-~~~~~~~---~~~~L~i~~~~~-~d~G 165 (189)
T 2v5t_A 91 VIVNVPPAISMPQKSFNATAERGEEMTFSCRASGSPEPAISWFRNGKLIEEN-EKYILKG---SNTELTVRNIIN-SDGG 165 (189)
T ss_dssp EEEEEEEEEECSCCEEEEETTSCCCEEEECEEEEESCCEEEEEETTEECCCS-SSEEEET---TTTEEEECSCCG-GGCE
T ss_pred EEecCCCCcccccccccccccCCCcEEEEEEEccCCCCeEEEEECCEECcCC-CcEEEec---CCCEEEEcCCCh-hhCe
Confidence 44555555543333 345667999999999999999999999999987643 3444432 345599999998 9999
Q ss_pred EEEEEeeeCCCceEeeEEEEEEe
Q psy2442 83 VYECVAENGVGDAVSAEASLTVY 105 (111)
Q Consensus 83 ~y~c~~~~~~~~~~~~~~~l~~~ 105 (111)
.|.|.+.|..|.. ...+.|.|.
T Consensus 166 ~Y~C~a~n~~g~~-~~~~~l~V~ 187 (189)
T 2v5t_A 166 PYVCRATNKAGED-EKQAFLQVF 187 (189)
T ss_dssp EEEEEEEETTEEE-EEEEEEEEE
T ss_pred eEEEEEEeCCCce-eEEEEEEEE
Confidence 9999999998864 666666654
No 93
>4fa8_A Secreted protein BARF1; immunoglobulin-like domains, 4-helix bundle fold, viral PROT cytokine complex; HET: NAG BMA; 2.20A {Human herpesvirus 4} PDB: 2ch8_A* 3uez_A* 4adf_A* 4adq_A*
Probab=99.52 E-value=6.9e-14 Score=77.28 Aligned_cols=91 Identities=13% Similarity=0.172 Sum_probs=63.2
Q ss_pred eeEEecCCCeeEEcCcceeeecCCcEEEEEEEeccCCCeEEEEECCeeccC---CCCceEEEeCCCCCeEEEEccCCCCC
Q psy2442 3 RKVRFLDPPEITLRPRNQAVKAGGITSFYCIARGDPIPVIQWRKNGKRVSG---TQSRYMVQEFPPGGSLLRIEPVRHAR 79 (111)
Q Consensus 3 ~~l~v~~~p~~~~~~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~ 79 (111)
+.|.|..+|.+...+....+..|+.+.|.|.+.|.|.|.+.|++++..+.. ...++... .++....+.+..+.. .
T Consensus 99 ~~l~V~~p~~~~~~~~~~~v~~g~~~~l~C~~~G~P~P~v~W~~~~~~~~~~~~~~~r~~~~-~~g~l~il~i~~v~~-~ 176 (203)
T 4fa8_A 99 EHLSVVKPLTLSVHSERSQFPDFSVLTVTCTVNAFPHPHVQWLMPEGVEPAPTAANGGVMKE-KDGSLSVAVDLSLPK-P 176 (203)
T ss_dssp EEEEEEEEEEEEEEEEECCSSCSCCEEEEEEEEEESCCEEEECCC------------CCEEC-TTSCEEEEEEEEECS-S
T ss_pred EEEEecCCceeeecceeEEEcCCCEEEEEEEcCCCCCCEEEEEECCeeecCcccccceEEEe-CCCCEEEEEECCCCH-H
Confidence 467777777777667777788999999999999999999999887654421 12333332 121223355567887 9
Q ss_pred CCeEEEEEeeeCCCce
Q psy2442 80 DDAVYECVAENGVGDA 95 (111)
Q Consensus 80 d~g~y~c~~~~~~~~~ 95 (111)
|+|.|.|.+.|..|..
T Consensus 177 D~G~YtC~A~N~~G~a 192 (203)
T 4fa8_A 177 WHLPVTCVGKNDKEEA 192 (203)
T ss_dssp CCCCEEEEEESSSCEE
T ss_pred HCEEEEEEEEcCCCEE
Confidence 9999999999999875
No 94
>3k0w_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1, isoform 2; hydrolase, immunoglobulin domain, nucleus, protease; 2.80A {Homo sapiens}
Probab=99.52 E-value=8.4e-13 Score=73.33 Aligned_cols=84 Identities=25% Similarity=0.400 Sum_probs=67.6
Q ss_pred CeeEEcCcceeeecCCcEEEEEEEeccCCCeEEEEECCeeccCCCCceEEEeCCCCCeEEEEccCCCCCCCeEEEEEeee
Q psy2442 11 PEITLRPRNQAVKAGGITSFYCIARGDPIPVIQWRKNGKRVSGTQSRYMVQEFPPGGSLLRIEPVRHARDDAVYECVAEN 90 (111)
Q Consensus 11 p~~~~~~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~g~y~c~~~~ 90 (111)
|.+...+....+..|+.+.|.|.+.+.|.+.+.|++++..+... ....|.|..+.. .|.|.|.|.+.|
T Consensus 119 p~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~v~W~~~~~~~~~~-----------~~~~L~i~~v~~-~d~G~Y~C~a~n 186 (218)
T 3k0w_A 119 LQICVEPTSQKLMPGSTLVLQCVAVGSPIPHYQWFKNELPLTHE-----------TKKLYMVPYVDL-EHQGTYWCHVYN 186 (218)
T ss_dssp CEEEECCCCEEECTTCCEEEECEEEBSSCCEEEEEETTEECTTC-----------CSSEEEESSCCG-GGCEEEEEEEEC
T ss_pred ceEEECCCceeecCCCcEEEEEEecccCCCeEEEEECCEECCCC-----------CCCEEEEeecCh-hcCEEEEEEEEc
Confidence 56666666778889999999999999999999999999887543 223488899998 999999999999
Q ss_pred CCCceEeeEEEEEEec
Q psy2442 91 GVGDAVSAEASLTVYE 106 (111)
Q Consensus 91 ~~~~~~~~~~~l~~~~ 106 (111)
..|...+..+.|.|.+
T Consensus 187 ~~g~~~s~~~~l~V~~ 202 (218)
T 3k0w_A 187 DRDSQDSKKVEIIIDE 202 (218)
T ss_dssp SSCEEECCCEEEEECC
T ss_pred CCCCceeeeEEEEEeC
Confidence 8876446666666654
No 95
>1epf_A NCAM, protein (neural cell adhesion molecule); immunoglobulin fold, glycoprotein; 1.85A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 PDB: 2ncm_A 3ncm_A
Probab=99.52 E-value=1e-12 Score=71.31 Aligned_cols=97 Identities=24% Similarity=0.395 Sum_probs=72.3
Q ss_pred CeeEEcCcceeeecCCcEEEEEEEeccC-CCeEEEEE-CCeeccCCCCceEEEeCCCCCeEEEEccCCCCCCCeEEEEEe
Q psy2442 11 PEITLRPRNQAVKAGGITSFYCIARGDP-IPVIQWRK-NGKRVSGTQSRYMVQEFPPGGSLLRIEPVRHARDDAVYECVA 88 (111)
Q Consensus 11 p~~~~~~~~~~~~~g~~~~l~c~~~~~~-~~~~~w~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~g~y~c~~ 88 (111)
+.+...+....+..|+.+.|.|...+.+ .+.+.|++ ++..+.....++...........|.|.++.. .|.|.|.|.+
T Consensus 3 ~~v~~~p~~~~v~~G~~v~l~C~~~~~~~~~~v~W~~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~~~~-~d~G~Y~C~~ 81 (191)
T 1epf_A 3 LQVDIVPSQGEISVGESKFFLCQVAGDAKDKDISWFSPNGEKLSPNQQRISVVWNDDDSSTLTIYNANI-DDAGIYKCVV 81 (191)
T ss_dssp CCEEEESSSEEEETTCCEEEEEEECCCSCCCEEEEECTTSCEECCBSSSEEEEEEETTEEEEEECSCCG-GGCEEEEEEE
T ss_pred eEEEecCCCcEEcCCCCEEEEEECCCCCCCceEEEEeCCCccccCCCCeEEEEECCCCceEEEEccCCc-ccCEEEEEEE
Confidence 4455667777899999999999998876 67999999 7777754445555543222446699999998 9999999999
Q ss_pred eeCCCceEeeEEEEEEecCC
Q psy2442 89 ENGVGDAVSAEASLTVYEGE 108 (111)
Q Consensus 89 ~~~~~~~~~~~~~l~~~~~~ 108 (111)
.+..+......+.+.+..+|
T Consensus 82 ~~~~~~~~~~~~~l~v~~~p 101 (191)
T 1epf_A 82 TAEDGTQSEATVNVKIFQKL 101 (191)
T ss_dssp EETTTEEEEEEEEEEEECCS
T ss_pred EcCCCcceEEEEEEEeecCc
Confidence 99875434666677665543
No 96
>2v9r_A Roundabout homolog 1; proto-oncogene, differentiation, phosphorylation, disease MU neuronal development, immunoglobulin domain, chemotaxis; 2.00A {Homo sapiens} PDB: 2v9q_A
Probab=99.52 E-value=1.8e-13 Score=75.34 Aligned_cols=100 Identities=30% Similarity=0.505 Sum_probs=71.9
Q ss_pred eEEecC-CCeeEEcCcceeeecCCcEEEEEEE-eccCCCeEEEEECCeeccCCCCceEEEeCCCCCeEEEEccCCCCCCC
Q psy2442 4 KVRFLD-PPEITLRPRNQAVKAGGITSFYCIA-RGDPIPVIQWRKNGKRVSGTQSRYMVQEFPPGGSLLRIEPVRHARDD 81 (111)
Q Consensus 4 ~l~v~~-~p~~~~~~~~~~~~~g~~~~l~c~~-~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~ 81 (111)
.|.|.. ++.+...+....+..|+.+.|.|.+ .+.|.+.+.|++++..+.....++... ...|.+..+.. .|.
T Consensus 104 ~l~V~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~v~W~~~~~~l~~~~~~~~~~-----~~~L~i~~~~~-~d~ 177 (212)
T 2v9r_A 104 SLEVAILRDDFRQNPSDVMVAVGEPAVMECQPPRGHPEPTISWKKDGSPLDDKDERITIR-----GGKLMITYTRK-SDA 177 (212)
T ss_dssp EEEECEECSSCSBCCCCEEEETTSCEEEECBCCCEESCCEEEEEETTEEECTTSTTEEEE-----TTEEEESSCCG-GGC
T ss_pred EEEEEeccccceeCCCceEecCCCcEEEEEecCCCCCCCEEEEEECCccCCCCcceEEcc-----CCeEEEeeCCH-hhC
Confidence 444443 2333344455678899999999998 888999999999999886543444432 23589999998 999
Q ss_pred eEEEEEeeeCCCceEeeEEEEEEecCCC
Q psy2442 82 AVYECVAENGVGDAVSAEASLTVYEGEE 109 (111)
Q Consensus 82 g~y~c~~~~~~~~~~~~~~~l~~~~~~~ 109 (111)
|.|.|.+.|..|......+.|.|.++|.
T Consensus 178 G~Y~C~a~N~~g~~~s~~~~l~V~~~P~ 205 (212)
T 2v9r_A 178 GKYVCVGTNMVGERESEVAELTVLERPS 205 (212)
T ss_dssp EEEEEEEEETTEEEECCCEEEEEEC---
T ss_pred eeEEEEEecccCceecceEEEEEEeCch
Confidence 9999999999886433347788877664
No 97
>1bih_A Hemolin; insect immunity, LPS-binding, homophilic adhesion; 3.10A {Hyalophora cecropia} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.52 E-value=4.2e-13 Score=79.97 Aligned_cols=93 Identities=32% Similarity=0.504 Sum_probs=75.6
Q ss_pred eeEEecCCCeeEEcCcc-eeeecCCcEEEEEEEeccCCCeEEEEECCeeccCCCCceEEEeCCCCCeEEEEccCCCCCCC
Q psy2442 3 RKVRFLDPPEITLRPRN-QAVKAGGITSFYCIARGDPIPVIQWRKNGKRVSGTQSRYMVQEFPPGGSLLRIEPVRHARDD 81 (111)
Q Consensus 3 ~~l~v~~~p~~~~~~~~-~~~~~g~~~~l~c~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~ 81 (111)
+.|.|..+|.+...+.. ..+..|+.+.|.|.+.+.|.+.+.|++++..+.. .++... . ..|.|.++.. .|.
T Consensus 301 ~~l~V~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~g~~~~~--~~~~~~----~-~~L~i~~~~~-~d~ 372 (395)
T 1bih_A 301 LKLTVVSAPKYEQKPEKVIVVKQGQDVTIPCKVTGLPAPNVVWSHNAKPLSG--GRATVT----D-SGLVIKGVKN-GDK 372 (395)
T ss_dssp EEEEEEEEEEEEECCCSEEEECTTSCEEEECEEEEESCCCCEEEETTEECCS--SSEEEE----T-TEEEESSCCS-TTC
T ss_pred EEEEEEcCCccccCCCcceEecCCCeEEEEEEECcccCCeeEEEECCEECCC--CceEEE----C-CEEEEeeCCc-ccC
Confidence 46778888888777766 6788999999999999999999999999998764 355443 2 2599999998 999
Q ss_pred eEEEEEeeeCCCceEeeEEEEEE
Q psy2442 82 AVYECVAENGVGDAVSAEASLTV 104 (111)
Q Consensus 82 g~y~c~~~~~~~~~~~~~~~l~~ 104 (111)
|.|.|.+.|..|.. ...+.|.|
T Consensus 373 G~Y~C~a~N~~G~~-~~~~~l~V 394 (395)
T 1bih_A 373 GYYGCRATNEHGDK-YFETLVQV 394 (395)
T ss_dssp EEEEEEEEETTEEE-EEEEEEEE
T ss_pred EEEEEEEEccCCCc-eEEEEEEE
Confidence 99999999999874 66666654
No 98
>2c5d_C AXL oncogene, tyrosine-protein kinase receptor UFO; signaling protein/receptor, growth regulation/complex, vitamin K-dependent protein; HET: NAG; 3.3A {Homo sapiens}
Probab=99.51 E-value=1.1e-12 Score=71.49 Aligned_cols=98 Identities=19% Similarity=0.223 Sum_probs=72.1
Q ss_pred CCeeEEcCcceeeecCCcEEEEEEEe-ccCCCeEEEEECCeeccCCCC-ceEEEeCCCC------CeEEEEccCCCCCCC
Q psy2442 10 PPEITLRPRNQAVKAGGITSFYCIAR-GDPIPVIQWRKNGKRVSGTQS-RYMVQEFPPG------GSLLRIEPVRHARDD 81 (111)
Q Consensus 10 ~p~~~~~~~~~~~~~g~~~~l~c~~~-~~~~~~~~w~~~~~~~~~~~~-~~~~~~~~~~------~~~l~~~~~~~~~d~ 81 (111)
+|.+...+....+..|+.+.|.|.+. +.|.+.+.|++++..+..... ++........ ...|.|.++.. .|.
T Consensus 2 ~~~~~~~p~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~-~d~ 80 (195)
T 2c5d_C 2 ESPFVGNPGNITGARGLTGTLRCQLQVQGEPPEVHWLRDGQILELADSTQTQVPLGEDEQDDWIVVSQLRITSLQL-SDT 80 (195)
T ss_dssp CCSEEECCCCEEECTTCCEEEEEEEEEESSCCCCEEEETTEECCSCEEEEEEEECSSSTTSEEEEEEEEEESSCCS-TTC
T ss_pred CCeeccChhheEEecCCcEEEecccccCCCCcEEEEEECCEEcccCCCCceEEEEccccccceeeccEEEEEeccc-cCC
Confidence 57778888888999999999999998 888889999999998864321 2333221101 24599999998 999
Q ss_pred eEEEEEeeeCCCceEeeEEEEEEecCC
Q psy2442 82 AVYECVAENGVGDAVSAEASLTVYEGE 108 (111)
Q Consensus 82 g~y~c~~~~~~~~~~~~~~~l~~~~~~ 108 (111)
|.|.|.+.|..+......+.|.+..+|
T Consensus 81 G~Y~C~~~~~~~~~~~~~~~l~V~~~p 107 (195)
T 2c5d_C 81 GQYQCLVFLGHQTFVSQPGYVGLEGLP 107 (195)
T ss_dssp EEEEEEEEETTEEEECCCEEEEECCSC
T ss_pred cEEEEEEEeCCCceecccEEEEEecCC
Confidence 999999999766432334666665544
No 99
>2edn_A Myosin-binding protein C, fast-type; beta-sandwich, IG-fold, fast MYBP-C, C-protein, skeletal muscle fast isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.51 E-value=2.6e-13 Score=68.87 Aligned_cols=94 Identities=18% Similarity=0.166 Sum_probs=67.4
Q ss_pred eeEEcCcceeeecCCcEEEEEEEecc---CCCeEEEEECCee-cc-CCCCceEEEeC-CC----CCeEEEEccCCCCCCC
Q psy2442 12 EITLRPRNQAVKAGGITSFYCIARGD---PIPVIQWRKNGKR-VS-GTQSRYMVQEF-PP----GGSLLRIEPVRHARDD 81 (111)
Q Consensus 12 ~~~~~~~~~~~~~g~~~~l~c~~~~~---~~~~~~w~~~~~~-~~-~~~~~~~~~~~-~~----~~~~l~~~~~~~~~d~ 81 (111)
.+...+..+.+..|+.++|.|.+.+. |.|.+.|+++... +. ....++.+... +. ....|.|.++.. .|+
T Consensus 14 ~f~~~P~~v~V~eG~~v~L~C~v~g~~~~p~P~V~W~Kgk~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~-~D~ 92 (118)
T 2edn_A 14 VFLKKPDSVSVETGKDAVVVAKVNGKELPDKPTIKWFKGKWLELGSKSGARFSFKESHNSASNVYTVELHIGKVVL-GDR 92 (118)
T ss_dssp SCSBCCCCCEEETTSCEECCEEEETTTSSSCCCCEEEETTTCCCCCSTTSSCEEEEEECSSSCEEEEEEEESSCCT-TTC
T ss_pred eEEECCCCeEEeCCCCEEEEEEEeccCCCCCCcEEEeeCCEeccCCCCccEEEeccccccccccceEEEEEeeCCh-hhC
Confidence 34455777889999999999999875 6789999996421 11 11123333210 10 124599999998 999
Q ss_pred eEEEEEeeeCCCceEeeEEEEEEecC
Q psy2442 82 AVYECVAENGVGDAVSAEASLTVYEG 107 (111)
Q Consensus 82 g~y~c~~~~~~~~~~~~~~~l~~~~~ 107 (111)
|.|.|.+.|..|. .++.+.|.|.++
T Consensus 93 G~Y~Cevsn~~g~-~s~~~~L~V~~~ 117 (118)
T 2edn_A 93 GYYRLEVKAKDTC-DSCGFNIDVEAP 117 (118)
T ss_dssp SCEEEEEECSSCE-EEEEECCEEECC
T ss_pred EEEEEEEEEcCCc-EEEEEEEEEEcC
Confidence 9999999999986 488888888764
No 100
>3rbs_A Myomesin-1; immunoglobulin C-SET domain, contractIle protein; 1.85A {Homo sapiens}
Probab=99.51 E-value=1.9e-13 Score=75.66 Aligned_cols=86 Identities=17% Similarity=0.241 Sum_probs=65.3
Q ss_pred CCeeEEcCcceeeecCCcEEEEEEEecc-CCCeEEEEECCeeccCCCCceEEEeCCCCCeEEEEccCCCCCCCeEEEEEe
Q psy2442 10 PPEITLRPRNQAVKAGGITSFYCIARGD-PIPVIQWRKNGKRVSGTQSRYMVQEFPPGGSLLRIEPVRHARDDAVYECVA 88 (111)
Q Consensus 10 ~p~~~~~~~~~~~~~g~~~~l~c~~~~~-~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~g~y~c~~ 88 (111)
+|.+.... ...+..|+.+.|.|.+.+. |.|.+.|++++..+... .++... .....|.|.++.. .|.|.|.|.+
T Consensus 117 ~P~~~~~~-~~~v~~g~~v~l~C~v~g~~P~p~i~W~k~g~~l~~~-~~~~~~---~~~~~L~I~~v~~-~D~G~Y~C~a 190 (207)
T 3rbs_A 117 GPHFVEYL-SWEVTGECNVLLKCKVANIKKETHIVWYKDEREISVD-EKHDFK---DGICTLLITEFSK-KDAGIYEVIL 190 (207)
T ss_dssp SSEEEEEE-EEEEETTTEEEEEEEEESCCTTCEEEEEETTEEECCC-CCCCCS---SEEEEEEETTCCG-GGCEEEEEEE
T ss_pred CCceEecC-CcEEcCCCcEEEEEEEeCCCCCCEEEEEECCEECCCC-CceEcC---CCEEEEEECCCCc-ccCEEEEEEE
Confidence 56665444 3678899999999999998 89999999999988643 232111 1223599999998 9999999999
Q ss_pred eeCCCceEeeEEEE
Q psy2442 89 ENGVGDAVSAEASL 102 (111)
Q Consensus 89 ~~~~~~~~~~~~~l 102 (111)
.|..|.. .....|
T Consensus 191 ~N~~G~~-~~~~~L 203 (207)
T 3rbs_A 191 KDDRGKD-KSRLKL 203 (207)
T ss_dssp EETTEEE-EEEEEE
T ss_pred EcCCCEE-EEEEEE
Confidence 9999874 555554
No 101
>1rhf_A Tyrosine-protein kinase receptor TYRO3; AXL/TYRO3 family, cellular adhesion, ligand-independent DIME mutational analysis, transferase; HET: EPE; 1.96A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4
Probab=99.51 E-value=3.9e-13 Score=72.52 Aligned_cols=96 Identities=24% Similarity=0.309 Sum_probs=68.0
Q ss_pred CeeEEcCcceeeecCCcEEEEEEEeccCCCeEEEEECCeeccCCCCceEEEeCC-CCCeEEEEccCCCCCCCeEEEEEee
Q psy2442 11 PEITLRPRNQAVKAGGITSFYCIARGDPIPVIQWRKNGKRVSGTQSRYMVQEFP-PGGSLLRIEPVRHARDDAVYECVAE 89 (111)
Q Consensus 11 p~~~~~~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~~~d~g~y~c~~~ 89 (111)
+.+...+..+.+..|+.+.|.|...+.+.+.+.|++++..+... .+....... .....|.+.++.. .|.|.|.|.+.
T Consensus 3 ~~~~~~p~~~~v~~G~~v~l~C~~~~~p~~~v~W~k~~~~~~~~-~~~~~~~~~~~~~~~L~i~~~~~-~d~G~Y~C~~~ 80 (182)
T 1rhf_A 3 LKLMGAPVKLTVSQGQPVKLNCSVEGMEEPDIQWVKDGAVVQNL-DQLYIPVSEQHWIGFLSLKSVER-SDAGRYWCQVE 80 (182)
T ss_dssp ----CCCEEEEEETTCCEEEEEEEESCSSCCEEEEETTEECCSS-EEEEEEEETTEEEEEEEESSCCG-GGCEEEEEEES
T ss_pred CEEEeCCcceEEeCCCcEEEEEEEeCCCCCeEEEEECCeecCCC-CceEEEecCCCceEEEEEeecCc-ccCeEEEEEEE
Confidence 44555666678899999999999999888899999999887643 233222111 0124588999998 99999999999
Q ss_pred eCCCceEeeEEEEEEecCC
Q psy2442 90 NGVGDAVSAEASLTVYEGE 108 (111)
Q Consensus 90 ~~~~~~~~~~~~l~~~~~~ 108 (111)
|..+......+.|.+..+|
T Consensus 81 ~~~~~~~~~~~~l~V~~~p 99 (182)
T 1rhf_A 81 DGGETEISQPVWLTVEGVP 99 (182)
T ss_dssp SCTTCEECCCEEEEEECSC
T ss_pred cCCCcEEEEEEEEEEecCC
Confidence 9866533456667666544
No 102
>3jz7_A MCAR, CAR, coxsackievirus and adenovirus receptor homolog; cell adhesion molecule, immunoglobuline superfamily, alternative splicing, cell adhesion; 2.19A {Mus musculus} PDB: 3mj7_B* 2npl_X
Probab=99.51 E-value=5.9e-14 Score=77.26 Aligned_cols=99 Identities=15% Similarity=0.196 Sum_probs=69.8
Q ss_pred eeEEecCCCeeEEcCcceeeecCCcEEEEEEE-eccCCCeEEEEECCeeccCCCCceEEEeCCCCCeEEEEccCCCCCCC
Q psy2442 3 RKVRFLDPPEITLRPRNQAVKAGGITSFYCIA-RGDPIPVIQWRKNGKRVSGTQSRYMVQEFPPGGSLLRIEPVRHARDD 81 (111)
Q Consensus 3 ~~l~v~~~p~~~~~~~~~~~~~g~~~~l~c~~-~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~ 81 (111)
+.|.|..+|.+........+..|+.+.|.|.+ .+.|.+.+.|++.+........... .. ....|.+.++.. .|.
T Consensus 114 ~~l~V~~~p~~~~~~~~~~~~~g~~v~l~C~~~~g~p~~~v~W~~~~~~~~~~~~~~~-~~---~~~~L~i~~~~~-~d~ 188 (214)
T 3jz7_A 114 FLLTVLVKPSGTRCFVDGSEEIGNDFKLKCEPKEGSLPLQFEWQKLSDSQTMPTPWLA-EM---TSPVISVKNASS-EYS 188 (214)
T ss_dssp EEEEEECCCBSCEEEEESCCBTTCCEEEEEECSBCCSSCEEEEEECSTTCCCCGGGGG-GT---TSSEEEECSCCG-GGC
T ss_pred EEEEEEcCCCCceeeeecceecCCcEEEEecCCCCCCCCEEEEEECCCCCccCcccee-cc---CCCEEEEecCCH-HHC
Confidence 46777777766544444457789999999999 8889999999995432211101110 00 234599999998 999
Q ss_pred eEEEEEeeeCCCceEeeEEEEEEecC
Q psy2442 82 AVYECVAENGVGDAVSAEASLTVYEG 107 (111)
Q Consensus 82 g~y~c~~~~~~~~~~~~~~~l~~~~~ 107 (111)
|.|.|.+.|..|.. ...+.|.|..+
T Consensus 189 G~Y~C~a~N~~g~~-~~~~~l~V~~P 213 (214)
T 3jz7_A 189 GTYSCTVQNRVGSD-QCMLRLDVVPP 213 (214)
T ss_dssp EEEEEEEECSSCEE-EEEEEECCBCC
T ss_pred EEEEEEEEcCCCcE-EEEEEEEEeCC
Confidence 99999999999875 77777776644
No 103
>3sgj_C Human FCG3A receptor; receptor complex, FC receptor, antibody, immune system; HET: NAG BMA MAN FUC; 2.20A {Homo sapiens} PDB: 3sgk_C*
Probab=99.50 E-value=2.9e-13 Score=74.74 Aligned_cols=97 Identities=16% Similarity=0.175 Sum_probs=68.9
Q ss_pred eeEEecCCCeeEEcCcceeeecCCcEEEEEEEecc-CCCeEEEEECCeeccCCCCceEEEeCCCCCeEEEEccCCCCCCC
Q psy2442 3 RKVRFLDPPEITLRPRNQAVKAGGITSFYCIARGD-PIPVIQWRKNGKRVSGTQSRYMVQEFPPGGSLLRIEPVRHARDD 81 (111)
Q Consensus 3 ~~l~v~~~p~~~~~~~~~~~~~g~~~~l~c~~~~~-~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~ 81 (111)
+.|.|..++.+...+. ..+..|+.+.|.|.+.+. +.+.+.|++++..+... . ....|.|.++.. .|.
T Consensus 82 ~~l~V~~~p~~~~~~~-~~v~~G~~v~L~C~~~~~~p~~~v~W~k~g~~~~~~-------~---~~~~L~i~~v~~-~D~ 149 (204)
T 3sgj_C 82 VQLEVHIGWLLLQAPR-WVFKEEDPIHLRCHSWKNTALHKVTYLQNGKGRKYF-------H---HNSDFYIPKATL-KDS 149 (204)
T ss_dssp EEEEEECSSEEEECSC-SEEETTCCEEEEEEEGGGCCCEEEEEEETTEEEEEE-------E---ECCCEEESSCCG-GGC
T ss_pred EEEEEecCceEecCCc-eeEeCCCcEEEEEEecCCCCCceEEEEECCcEeecc-------c---CCceEEECcCCc-ccC
Confidence 4677777777665555 577899999999999665 45689999998875321 0 223488999998 999
Q ss_pred eEEEEEeeeCCCceEeeEEEEEEecCCCCC
Q psy2442 82 AVYECVAENGVGDAVSAEASLTVYEGEEKP 111 (111)
Q Consensus 82 g~y~c~~~~~~~~~~~~~~~l~~~~~~~~p 111 (111)
|.|.|.+.|..+...+..+.|.|.+++..|
T Consensus 150 G~Y~C~a~n~~~~~~s~~~~l~V~~~~~~P 179 (204)
T 3sgj_C 150 GSYFCRGLVGSKNVSSETVQITITQGLAVS 179 (204)
T ss_dssp EEEEEEEEETTEEEECCCEEEEEEC-----
T ss_pred EEEEEEEEeCCCceecCcEEEEEeCcCCCC
Confidence 999999999544434667788887766543
No 104
>3mjg_X Beta-type platelet-derived growth factor receptor; protein-protein complex, growth factor-receptor complex, TRA hormone complex; HET: NDG NAG; 2.30A {Homo sapiens}
Probab=99.50 E-value=2.6e-12 Score=73.82 Aligned_cols=102 Identities=19% Similarity=0.279 Sum_probs=71.5
Q ss_pred EEecC--CCeeEEcCcceeeecCCcEEEEEEEeccCCCeEEEEECCeeccCCCCceEEEeC---CCCCeEEEEccCCCCC
Q psy2442 5 VRFLD--PPEITLRPRNQAVKAGGITSFYCIARGDPIPVIQWRKNGKRVSGTQSRYMVQEF---PPGGSLLRIEPVRHAR 79 (111)
Q Consensus 5 l~v~~--~p~~~~~~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~---~~~~~~l~~~~~~~~~ 79 (111)
|.|.. +|.+...+....+..|+.+.|.|.+.+.|.+.+.|++++............... ......|.|..+.. .
T Consensus 174 l~v~~~~~p~i~~~~~~~~v~~G~~v~L~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~-~ 252 (289)
T 3mjg_X 174 VYRLQVSSINVSVNAVQTVVRQGENITLMCIVIGNEVVNFEWTYPRKESGRLVEPVTDFLLDMPYHIRSILHIPSAEL-E 252 (289)
T ss_dssp EEECCCCCCCCEEEESCSEEETTSCEEEEEEEESCSSBEEEEECTTSSSSCCCCCEEEESCTTTTEEEEEEEESSCCS-S
T ss_pred EEecCCCCCCcEEeCCcceeEcCCCEEEEEEECCCCCcceEEEcCCccCCCcccccccccCCcceEEEEEEEEcccCh-h
Confidence 44443 566655555567889999999999999999999999876654321111111100 00224599999998 9
Q ss_pred CCeEEEEEeeeCCCceEeeEEEEEEecCC
Q psy2442 80 DDAVYECVAENGVGDAVSAEASLTVYEGE 108 (111)
Q Consensus 80 d~g~y~c~~~~~~~~~~~~~~~l~~~~~~ 108 (111)
|.|.|.|.+.|..|.. .....|.+.+.+
T Consensus 253 D~G~Y~C~a~N~~G~~-~~~~~l~v~~~~ 280 (289)
T 3mjg_X 253 DSGTYTCNVTESVNDH-QDEKAINITVVE 280 (289)
T ss_dssp CCEEEEEEEEETTTTE-EEEEEEEEEEEC
T ss_pred hCcEEEEEeecCCCCc-eeEEEEEEEEEe
Confidence 9999999999999985 777777776554
No 105
>2e6q_A Obscurin-like protein 1; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.50 E-value=3.8e-12 Score=64.09 Aligned_cols=92 Identities=21% Similarity=0.260 Sum_probs=69.0
Q ss_pred CCeeEEcCcceeeecCCcEEEEEEEeccCCCeEEEEECCeeccCCC--C-------ceEEEeCCCCCeEEEEccCCCCCC
Q psy2442 10 PPEITLRPRNQAVKAGGITSFYCIARGDPIPVIQWRKNGKRVSGTQ--S-------RYMVQEFPPGGSLLRIEPVRHARD 80 (111)
Q Consensus 10 ~p~~~~~~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~~~~~~~~~--~-------~~~~~~~~~~~~~l~~~~~~~~~d 80 (111)
++.+...+++..+..|+.+.|.|.+.+ .+.+.|+++|..+.... . ++.+.. ++....|.|.++.. .|
T Consensus 8 ~~~~~~~l~d~~v~eG~~a~f~C~vs~--~p~v~W~knG~~l~~~~~~~~~~~~~~r~~i~~-~g~~~~L~I~~v~~-~D 83 (112)
T 2e6q_A 8 TARLVAGLEDVQVYDGEDAVFSLDLST--IIQGTWFLNGEELKSNEPEGQVEPGALRYRIEQ-KGLQHRLILHAVKH-QD 83 (112)
T ss_dssp CCCEEECCCCEEEETTCEEEEEEEESS--CCCCEEEESSCBCCSSCCCTTSCTTSCEEEECC-BTTEEEEEEESCCS-TT
T ss_pred CcEEecCCCCeEEcCCCcEEEEEEECC--CCeEEEEECCEECccCcccccccccccEEEEEe-CCcEEEEEECCCCH-HH
Confidence 456777888899999999999999987 66899999999997542 1 555542 21234599999998 99
Q ss_pred CeEEEEEeeeCCCceEeeEEEEEEecCCC
Q psy2442 81 DAVYECVAENGVGDAVSAEASLTVYEGEE 109 (111)
Q Consensus 81 ~g~y~c~~~~~~~~~~~~~~~l~~~~~~~ 109 (111)
+|.|.|...+. ......|.|.++|.
T Consensus 84 ~G~Y~~~~~~~----~~ssA~L~V~~~p~ 108 (112)
T 2e6q_A 84 SGALVGFSCPG----VQDSAALTIQESSG 108 (112)
T ss_dssp CSEEEEEEETT----EEEEEEEEEECSSC
T ss_pred CccEEEEEECC----eeEEEEEEEeCCCc
Confidence 99998765442 24566777877764
No 106
>2y25_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin-like D; 3.50A {Homo sapiens}
Probab=99.49 E-value=1.3e-12 Score=75.77 Aligned_cols=88 Identities=22% Similarity=0.394 Sum_probs=70.1
Q ss_pred CcceeeecCCcEEEEEEEeccCCCeEEEEECCeeccCCCCceEEEeCCCCCeEEEEccCCCCCCCeEEEEEeeeCCCceE
Q psy2442 17 PRNQAVKAGGITSFYCIARGDPIPVIQWRKNGKRVSGTQSRYMVQEFPPGGSLLRIEPVRHARDDAVYECVAENGVGDAV 96 (111)
Q Consensus 17 ~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~g~y~c~~~~~~~~~~ 96 (111)
+....+..|+.+.|.|.+.+.|.+.+.|++++..+... .++.+...++....|.+.++.. .|.|.|.|.+.|..|..
T Consensus 229 ~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~~~~~-~~~~~~~~~~~~~~L~i~~v~~-~d~G~Y~C~a~N~~g~~- 305 (317)
T 2y25_A 229 PDVVTIQEGKALNLTCNVWGDPPPEVSWLKNEKALASD-DHCNLKFEAGRTAYFTINGVST-ADSGKYGLVVKNKYGSE- 305 (317)
T ss_dssp CSEEEEETTSBBCEEEEEECSSCCEEEEEESSSEECCC-SSEEECCBTTTEEEEEEBSCCS-TTCEEEEEEEEETTEEE-
T ss_pred CccEEEEcCCEEEEEEEEecCCCCEEEEEECCEeCCCC-CcEEEEEcCCCEEEEEECCCCH-HHCEEEEEEEEeCCCeE-
Confidence 44567889999999999999999999999999888643 4555543222334699999998 99999999999999875
Q ss_pred eeEEEEEEecC
Q psy2442 97 SAEASLTVYEG 107 (111)
Q Consensus 97 ~~~~~l~~~~~ 107 (111)
...+.|.|..+
T Consensus 306 ~~~~~l~V~~P 316 (317)
T 2y25_A 306 TSDFTVSVFIP 316 (317)
T ss_dssp EEEEEEEEECC
T ss_pred EEEEEEEEEcC
Confidence 77888887654
No 107
>1pd6_A Cardiac MYBP-C;, myosin-binding protein C, cardiac-type, domain C2; IG domain, structural protein; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.49 E-value=1.1e-12 Score=65.31 Aligned_cols=79 Identities=22% Similarity=0.365 Sum_probs=58.9
Q ss_pred CCCeeEEcCcc-eeeecCCcEEEEEEEeccCCCeEEEEECCeeccCCCCceEEEeCCCCCeEEEEccCCCCCCCeEEEEE
Q psy2442 9 DPPEITLRPRN-QAVKAGGITSFYCIARGDPIPVIQWRKNGKRVSGTQSRYMVQEFPPGGSLLRIEPVRHARDDAVYECV 87 (111)
Q Consensus 9 ~~p~~~~~~~~-~~~~~g~~~~l~c~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~g~y~c~ 87 (111)
.+|.+...... +.+..|+.+.|.|.+ +.+.+.+.|++++..+.....++.+.... ....|.|.++.. .|+|.|.|.
T Consensus 14 ~~p~f~~~~~~~~~v~~G~~v~L~C~~-~~p~~~v~W~k~g~~l~~~~~~~~~~~~~-~~~~L~I~~v~~-~D~G~Y~C~ 90 (104)
T 1pd6_A 14 KSTAFQKKLEPAYQVSKGHKIRLTVEL-ADHDAEVKWLKNGQEIQMSGSKYIFESIG-AKRTLTISQCSL-ADDAAYQCV 90 (104)
T ss_dssp TTSSCSEECCSEEEEETTSCEEEEEEC-SSSSSCCEEEESSSEECCCSSSSEEEEET-TEEEEEECSCSS-SSCEEEEEE
T ss_pred CCCEEEEcCCCcEEEecCCCEEEEEEE-cCCCCEEEEEECCEECCCCCCeEEEEecC-CEEEEEECCCCc-ccCEEEEEE
Confidence 34555544444 678899999999999 67778899999999886542455554311 234699999998 999999999
Q ss_pred eee
Q psy2442 88 AEN 90 (111)
Q Consensus 88 ~~~ 90 (111)
+.+
T Consensus 91 a~~ 93 (104)
T 1pd6_A 91 VGG 93 (104)
T ss_dssp ETT
T ss_pred ECC
Confidence 844
No 108
>1qz1_A Neural cell adhesion molecule 1, 140 kDa isoform; IG modules, NCAM; 2.00A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ie5_A
Probab=99.49 E-value=2.4e-12 Score=73.93 Aligned_cols=98 Identities=23% Similarity=0.385 Sum_probs=72.4
Q ss_pred CCeeEEcCcceeeecCCcEEEEEEEeccC-CCeEEEEE-CCeeccCCCCceEEEeCCCCCeEEEEccCCCCCCCeEEEEE
Q psy2442 10 PPEITLRPRNQAVKAGGITSFYCIARGDP-IPVIQWRK-NGKRVSGTQSRYMVQEFPPGGSLLRIEPVRHARDDAVYECV 87 (111)
Q Consensus 10 ~p~~~~~~~~~~~~~g~~~~l~c~~~~~~-~~~~~w~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~g~y~c~ 87 (111)
++.+...+....+..|+.+.|.|.+.+.+ .+.+.|++ +|..+.....++...........|.|.++.. .|.|.|.|.
T Consensus 2 ~~~v~~~p~~~~v~~G~~v~l~C~~~~~~~~~~i~W~~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~~~~-~D~G~Y~C~ 80 (291)
T 1qz1_A 2 VLQVDIVPSQGEISVGESKFFLCQVAGDAKDKDISWFSPNGEKLSPNQQRISVVWNDDDSSTLTIYNANI-DDAGIYKCV 80 (291)
T ss_dssp CCCEEEESSSEEEETTCCEEEEEEESSCCSCCEEEEECTTSCBCCSSCSSEEEEEEETTEEEEEECSCCG-GGCEEEEEE
T ss_pred CcceEecCCCceEeCCCeEEEEEEeCCCCCCcEeEEECCCCeECccCCceEEEEEcCCCeEEEEEecCCC-CCCEEEEEE
Confidence 45566677777899999999999998876 57999998 6766654445554433222345699999998 999999999
Q ss_pred eeeCCCceEeeEEEEEEecCC
Q psy2442 88 AENGVGDAVSAEASLTVYEGE 108 (111)
Q Consensus 88 ~~~~~~~~~~~~~~l~~~~~~ 108 (111)
+.|..|......+.+.+..+|
T Consensus 81 ~~n~~g~~~~~~~~l~v~~~~ 101 (291)
T 1qz1_A 81 VTAEDGTQSEATVNVKIFQKL 101 (291)
T ss_dssp EECTTSCEEEEEEEEEEECCS
T ss_pred EEcCCCCeeEEEEEEEeeccc
Confidence 999876544566667665443
No 109
>3s35_X Vascular endothelial growth factor receptor 2; antibody, KDR, VEGF receptor, cancer, immune system-transfer complex; HET: NAG; 2.20A {Homo sapiens} PDB: 3s36_X 3s37_X
Probab=99.49 E-value=8.6e-13 Score=67.21 Aligned_cols=91 Identities=18% Similarity=0.208 Sum_probs=62.9
Q ss_pred cCcceeeecCCcEEEEEEEeccC--CCeEEEEECCeeccC----CCCceEEEeCC--CCCeEEEEccCCCCCCCeEEEEE
Q psy2442 16 RPRNQAVKAGGITSFYCIARGDP--IPVIQWRKNGKRVSG----TQSRYMVQEFP--PGGSLLRIEPVRHARDDAVYECV 87 (111)
Q Consensus 16 ~~~~~~~~~g~~~~l~c~~~~~~--~~~~~w~~~~~~~~~----~~~~~~~~~~~--~~~~~l~~~~~~~~~d~g~y~c~ 87 (111)
++..+.+..|+++.|.|.+.+.+ .+.+.|++++..+.. ...+....... .....|.|.++.. .|+|.|.|.
T Consensus 14 p~~~v~v~~G~~v~L~C~~~g~p~~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~-~DsG~Y~C~ 92 (122)
T 3s35_X 14 PSHGIELSVGEKLVLNCTARTELNVGIDFNWEYPSSKHQHKKLVNRDLKTQSGSEMKKFLSTLTIDGVTR-SDQGLYTCA 92 (122)
T ss_dssp SCSCEEEEETCCEEEEEEEEECTTCCCEEEEECSCTTCCHHHHBCCSCCEEEETTEEEEEEEEEESSCCG-GGCEEEEEE
T ss_pred CCCCEEEecCCeEEEEEEEEcCCCCcEEEEEECCCcccCCceeeeeccccccCCceeeEEEEEEECCCCc-ccCEEEEEE
Confidence 34445788999999999998844 468899998774321 11111111000 0234599999998 999999999
Q ss_pred eeeCCCceEeeEEEEEEecCC
Q psy2442 88 AENGVGDAVSAEASLTVYEGE 108 (111)
Q Consensus 88 ~~~~~~~~~~~~~~l~~~~~~ 108 (111)
+.|..|.. ...+.|.|.++|
T Consensus 93 a~n~~g~~-~~~~~l~V~~~p 112 (122)
T 3s35_X 93 ASSGLMTK-KNSTFVRVHEKP 112 (122)
T ss_dssp EECSSCEE-EEEEEEEEEEEE
T ss_pred EccCCCce-EEEEEEEEeccC
Confidence 99998874 677788877655
No 110
>1gl4_B Basement membrane-specific heparan sulfate proteoglycan core protein; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: b.1.1.4
Probab=99.49 E-value=9.2e-13 Score=64.69 Aligned_cols=79 Identities=28% Similarity=0.429 Sum_probs=59.6
Q ss_pred CcceeeecCCcEEEEEEEe-ccCCCeEEEEECCeeccCCCCceEEEeCCCCCeEEEEccCCCCCCCeEEEEEeeeCCCce
Q psy2442 17 PRNQAVKAGGITSFYCIAR-GDPIPVIQWRKNGKRVSGTQSRYMVQEFPPGGSLLRIEPVRHARDDAVYECVAENGVGDA 95 (111)
Q Consensus 17 ~~~~~~~~g~~~~l~c~~~-~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~g~y~c~~~~~~~~~ 95 (111)
+..+.+..|+.+.|.|... +.|.+.+.|++++..... .+... ....|.|.++.. .|+|.|.|.+.|..|..
T Consensus 17 ~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~k~~~~~~~--~~~~~-----~~~~L~i~~v~~-~D~G~Y~C~a~n~~g~~ 88 (98)
T 1gl4_B 17 QRSQSVRPGADVTFICTAKSKSPAYTLVWTRLHNGKLP--SRAMD-----FNGILTIRNVQP-SDAGTYVCTGSNMFAMD 88 (98)
T ss_dssp CCEEEECTTCCEEEEEEEEESSSCCEEEEEEGGGBCCC--TTEEE-----ETTEEEECSCCG-GGCEEEEEEEECSSCEE
T ss_pred CCCeEEecCCCEEEEEeCCCCCCCcEEEEEeCCCCCCC--ceeec-----CCCEEEEeCCCh-hhCEEEEEEecCCCCcc
Confidence 4556788999999999998 688889999997544322 12111 223599999998 99999999999998874
Q ss_pred EeeEEEEEE
Q psy2442 96 VSAEASLTV 104 (111)
Q Consensus 96 ~~~~~~l~~ 104 (111)
...+.|.|
T Consensus 89 -~~~~~l~V 96 (98)
T 1gl4_B 89 -QGTATLHV 96 (98)
T ss_dssp -EEEEEEEE
T ss_pred -ccEEEEEE
Confidence 66666655
No 111
>2dm7_A KIAA1556 protein; beta-sandwich, IG-fold, obscurin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2edl_A 2edw_A 2gqh_A 2edt_A 2edq_A 2edr_A
Probab=99.48 E-value=1.5e-12 Score=65.03 Aligned_cols=90 Identities=19% Similarity=0.352 Sum_probs=66.1
Q ss_pred CCCeeEEcCcceeeecCCcEEEEEEEeccCCCeEEEEECCeeccCCCCceEEEeCCCCCeEEEEccCCCCCCCeEEEEEe
Q psy2442 9 DPPEITLRPRNQAVKAGGITSFYCIARGDPIPVIQWRKNGKRVSGTQSRYMVQEFPPGGSLLRIEPVRHARDDAVYECVA 88 (111)
Q Consensus 9 ~~p~~~~~~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~g~y~c~~ 88 (111)
.+|.+...+..+.+..|+.+.|.|.+.+. +.+.|++++..+... .++...... ....|.|.++.. .|+|.|.|.+
T Consensus 7 ~pp~~~~~~~~~~v~~G~~v~l~C~~~~~--p~v~W~k~~~~~~~~-~~~~~~~~~-~~~~L~I~~v~~-~D~G~Y~C~a 81 (108)
T 2dm7_A 7 GPARFTQDLKTKEASEGATATLQCELSKV--APVEWKKGPETLRDG-GRYSLKQDG-TRCELQIHDLSV-ADAGEYSCMC 81 (108)
T ss_dssp CCCCBCSCCBCCEEETTSCEEEEEEBSSS--CCCEEESSSSBCCSS-SSCEEEEET-TEEEEEESSCCT-TTCSEEEEEE
T ss_pred CCCeeeecCCcEEEeCCCcEEEEEEeCCC--CeeEEEECCEECCCC-CCEEEEecC-CEEEEEECCCCc-ccCEEEEEEE
Confidence 46677666777889999999999998765 689999998877543 555544322 334599999998 9999999998
Q ss_pred eeCCCceEeeEEEEEEecCC
Q psy2442 89 ENGVGDAVSAEASLTVYEGE 108 (111)
Q Consensus 89 ~~~~~~~~~~~~~l~~~~~~ 108 (111)
.| . .....+.|...|
T Consensus 82 ~n----~-~~~~~l~V~~~p 96 (108)
T 2dm7_A 82 GQ----E-RTSATLTVRALP 96 (108)
T ss_dssp TT----E-EEEEECEEECCC
T ss_pred cC----C-EEEEEEEEecCC
Confidence 44 2 455666666544
No 112
>3ejj_X Macrophage colony-stimulating factor 1 receptor; growth factor-receptor complex, receptor tyrosine kinase, CY 4-helix bundle, ATP-binding; HET: NAG; 2.40A {Mus musculus} PDB: 4exp_X*
Probab=99.48 E-value=1.3e-12 Score=74.94 Aligned_cols=102 Identities=22% Similarity=0.325 Sum_probs=73.3
Q ss_pred eeEEec----CCCeeEEcCcceeeecCCcEEEEEEEec-cCCCeEEEEECCeeccCCCCceEEEeCC-CCCeEEEEccCC
Q psy2442 3 RKVRFL----DPPEITLRPRNQAVKAGGITSFYCIARG-DPIPVIQWRKNGKRVSGTQSRYMVQEFP-PGGSLLRIEPVR 76 (111)
Q Consensus 3 ~~l~v~----~~p~~~~~~~~~~~~~g~~~~l~c~~~~-~~~~~~~w~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~ 76 (111)
..|.|. .+|.+...+....+..|+.+.|.|.+.+ .|.+.+.|++++..+.... ........ .....|.|.++.
T Consensus 175 ~~l~V~~~~~~~p~i~~~~~~~~~~~g~~~~l~C~~~~~~p~~~i~W~~~~~~~~~~~-~~~~~~~~~~~~~~L~i~~v~ 253 (289)
T 3ejj_X 175 IWLKVNRVHPEPPQIKLEPSKLVRIRGEAAQIVCSATNAEVGFNVILKRGDTKLEIPL-NSDFQDNYYKKVRALSLNAVD 253 (289)
T ss_dssp EEEEEESSCCCCCEEEEESSSEECCSSSCEEEEEEEEESSSCCEEEEEETTEECCCCE-EEEECSSSEEEEEEEEESSCC
T ss_pred EEEEEEECCCCCCeEEecCCceEEEeCCcEEEEEEeCCCCCceEEEEEECCEEeeccC-CcccccceEEeeEEEEEEeec
Confidence 456665 5777777777767788999999999988 6888999999998875421 11100000 023459999999
Q ss_pred CCCCCeEEEEEeeeCCCceEeeEEEEEEecC
Q psy2442 77 HARDDAVYECVAENGVGDAVSAEASLTVYEG 107 (111)
Q Consensus 77 ~~~d~g~y~c~~~~~~~~~~~~~~~l~~~~~ 107 (111)
. .|.|.|.|.+.|..|.. ...+.|.+...
T Consensus 254 ~-~d~G~Y~C~a~N~~G~~-~~s~~L~~~~~ 282 (289)
T 3ejj_X 254 F-QDAGIYSCVASNDVGTR-TATMNFQVVES 282 (289)
T ss_dssp S-SSCEEEEEEEECSSCEE-EEEEEEECC--
T ss_pred c-cCCEEEEEEEEcCCCCc-cccEEEEEEec
Confidence 8 99999999999999875 77777665443
No 113
>2c5d_C AXL oncogene, tyrosine-protein kinase receptor UFO; signaling protein/receptor, growth regulation/complex, vitamin K-dependent protein; HET: NAG; 3.3A {Homo sapiens}
Probab=99.48 E-value=4.6e-12 Score=69.04 Aligned_cols=92 Identities=22% Similarity=0.364 Sum_probs=72.1
Q ss_pred eeEEecCCCeeEEcCcceeeecCCcEEEEEEEeccCCC-eEEEEECCeeccCCCCceEEEeCCCCCeEEEEccCCCCCCC
Q psy2442 3 RKVRFLDPPEITLRPRNQAVKAGGITSFYCIARGDPIP-VIQWRKNGKRVSGTQSRYMVQEFPPGGSLLRIEPVRHARDD 81 (111)
Q Consensus 3 ~~l~v~~~p~~~~~~~~~~~~~g~~~~l~c~~~~~~~~-~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~ 81 (111)
+.|.|..+|.+...+....+..|+.+.|.|.+.+.|.+ .+.|++++..+...... . ....|.+.++ .|+
T Consensus 99 ~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~~v~W~~~~~~~~~~~~~----~---~~~~L~i~~~---~d~ 168 (195)
T 2c5d_C 99 GYVGLEGLPYFLEEPEDRTVAANTPFNLSCQAQGPPEPVDLLWLQDAVPLATAPGH----G---PQRSLHVPGL---NKT 168 (195)
T ss_dssp EEEEECCSCEEEECCCCEEECTTCCEEEEEEEECSSCCCEEEEEESSCBSSSSTTS----S---CCEEEEECCC---SSC
T ss_pred EEEEEecCCeEEcCCCcEEEcCCCEEEEEeECCCCCCCCEEEEEECCEeccCCCCc----C---CCCeEEEccc---ccC
Confidence 57888889988877777788899999999999999999 99999999887543221 1 4455777765 478
Q ss_pred eEEEEEeeeCCCceEeeEEEEEE
Q psy2442 82 AVYECVAENGVGDAVSAEASLTV 104 (111)
Q Consensus 82 g~y~c~~~~~~~~~~~~~~~l~~ 104 (111)
|.|.|.+.|..|...+..+.|.|
T Consensus 169 G~Y~C~a~N~~g~~~s~~~~l~V 191 (195)
T 2c5d_C 169 SSFSCEAHNAKGVTTSRTATITV 191 (195)
T ss_dssp EEEEEEEEETTEEEECCCEEEEE
T ss_pred ceEEEEEEcCCCceEEEEEEEEE
Confidence 99999999998864235666666
No 114
>2o26_X MAST/stem cell growth factor receptor; stem cell factor, receptor tyrosine kinase, class III, recep ligand complex, cytokine, 4-helix bundle; HET: NAG FUL MAN NDG; 2.50A {Mus musculus}
Probab=99.48 E-value=1.1e-12 Score=75.50 Aligned_cols=103 Identities=19% Similarity=0.267 Sum_probs=71.8
Q ss_pred eeEEec----CCCeeEEcCcceeeecCCcEEEEEEEeccCCCe-EEEEECCeec----cCCCCceEEEeC--CCCCeEEE
Q psy2442 3 RKVRFL----DPPEITLRPRNQAVKAGGITSFYCIARGDPIPV-IQWRKNGKRV----SGTQSRYMVQEF--PPGGSLLR 71 (111)
Q Consensus 3 ~~l~v~----~~p~~~~~~~~~~~~~g~~~~l~c~~~~~~~~~-~~w~~~~~~~----~~~~~~~~~~~~--~~~~~~l~ 71 (111)
+.|.|. .+|.+...+....+..|+.+.|.|.+.+.|.+. +.|++++..+ ... ........ ......|.
T Consensus 177 ~~l~V~~~~~~~P~i~~~~~~~~v~~G~~v~l~C~~~g~p~p~~i~W~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~L~ 255 (290)
T 2o26_X 177 FTLKVREAIKAIPVVSVPETSHLLKKGDTFTVVCTIKDVSTSVNSMWLKMNPQPQHIAQVK-HNSWHRGDFNYERQETLT 255 (290)
T ss_dssp EEEEEECCCCSCCEEECSCSBCCCCTTCCEEEEEEEEESSTTCEEEEEEESSSEEECCCEE-CCEEEEETTEEEEEEEEE
T ss_pred EEEEEEeCCCCCCccccCCCcceEecCCcEEEEEEEecCCcceeEEEecCCCCCccceeec-ccccccCceeeEEEEEEE
Confidence 345554 677777666667888999999999999999886 9999988762 211 11111100 00234599
Q ss_pred EccCCCCCCCeEEEEEeeeCCCceEeeEEEEEEecCC
Q psy2442 72 IEPVRHARDDAVYECVAENGVGDAVSAEASLTVYEGE 108 (111)
Q Consensus 72 ~~~~~~~~d~g~y~c~~~~~~~~~~~~~~~l~~~~~~ 108 (111)
|.++.. .|.|.|.|.+.|..|.. ...+.|.|.++|
T Consensus 256 I~~v~~-~d~G~Y~C~a~N~~g~~-~~~~~l~V~~~P 290 (290)
T 2o26_X 256 ISSARV-DDSGVFMCYANNTFGSA-NVTTTLKVVEKG 290 (290)
T ss_dssp ESSCCS-SSCEEEEEEEECSSCEE-EEEEEECC----
T ss_pred EcCCCc-ccCeEEEEEEeCCCCcE-EEEEEEEEEeCC
Confidence 999998 99999999999999875 777777766553
No 115
>3qs7_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, CY receptor complex, extracellular complex; HET: NAG; 4.30A {Homo sapiens}
Probab=99.48 E-value=3.2e-13 Score=81.79 Aligned_cols=101 Identities=14% Similarity=0.092 Sum_probs=68.4
Q ss_pred eeEEecCCCeeEEcC--cceeeecCCcEEEEEEEeccCCCeEEEEECCeeccCCCCceEEEeCCCCCeEEEEccCCCCCC
Q psy2442 3 RKVRFLDPPEITLRP--RNQAVKAGGITSFYCIARGDPIPVIQWRKNGKRVSGTQSRYMVQEFPPGGSLLRIEPVRHARD 80 (111)
Q Consensus 3 ~~l~v~~~p~~~~~~--~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d 80 (111)
+.|.|..+|.+...+ ..+.+..|+.+.|.|.+.+.|.|.+.|+++|..+....... . ....+....... .|
T Consensus 317 ~~L~V~~~p~i~~~~~~~~~~v~~G~~v~l~C~~~g~P~p~i~W~k~g~~l~~~~~~~--~----~~~~~~~~~~~~-~D 389 (423)
T 3qs7_E 317 ALVTIVEKGFINATNSSEDYEIDQYEEFCFSVRFKAYPQIRCTWTFSRKSFPCEQKGL--D----NGYSISKFCNHK-HQ 389 (423)
T ss_dssp EEEEEESSCEEEEC---CEECCCTTCCCCEEEEEEEESCCEEEEEETTEEEECBCCBC--S----SSSEEEEECCCT-TC
T ss_pred EEEEEEeCCcceEcCCCccEEecCCCeEEEEEEEEEcCCCeEEEEECCEECCCccccc--c----CCcEEEEEeccc-cc
Confidence 568888888876554 34567789999999999999999999999999885431100 0 111122244555 89
Q ss_pred CeEEEEEeeeCCCceEeeEEEEEEecCCCCC
Q psy2442 81 DAVYECVAENGVGDAVSAEASLTVYEGEEKP 111 (111)
Q Consensus 81 ~g~y~c~~~~~~~~~~~~~~~l~~~~~~~~p 111 (111)
+|.|.|.+.|..|.. ...+.|.+...|..|
T Consensus 390 ~G~YtC~A~N~~G~~-~~s~~L~v~~~p~~~ 419 (423)
T 3qs7_E 390 PGEYIFHAENDDAQF-TKMFTLNIRSGTKHH 419 (423)
T ss_dssp CSCEEEEEEETTEEE-EEEEEEC--------
T ss_pred CEEEEEEEEcCCceE-EEEEEEEEecCCccc
Confidence 999999999999975 888888888777553
No 116
>1bih_A Hemolin; insect immunity, LPS-binding, homophilic adhesion; 3.10A {Hyalophora cecropia} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.47 E-value=2.8e-13 Score=80.72 Aligned_cols=87 Identities=22% Similarity=0.346 Sum_probs=67.2
Q ss_pred EEecCCCeeEEcCcceeeecCCcEEEEEEEec-cCCCeEEEEECCeeccCCCCceEEEeCCCCCeEEEEccCCCCCCCeE
Q psy2442 5 VRFLDPPEITLRPRNQAVKAGGITSFYCIARG-DPIPVIQWRKNGKRVSGTQSRYMVQEFPPGGSLLRIEPVRHARDDAV 83 (111)
Q Consensus 5 l~v~~~p~~~~~~~~~~~~~g~~~~l~c~~~~-~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~g~ 83 (111)
|.|..+|.+...+..+.+..|+.+.|.|.+.+ .+.+.+.|+++|..+.....++.... ....|.|.++.. .|.|.
T Consensus 1 l~v~~~P~~~~~p~~~~v~~G~~v~l~C~~~~~~p~~~v~W~k~g~~~~~~~~~~~~~~---~~~~L~i~~~~~-~D~G~ 76 (395)
T 1bih_A 1 LPVDKYPVLKDQPAEVLFRENNPTVLECIIEGNDQGVKYSWKKDGKSYNWQEHNAALRK---DEGSLVFLRPQA-SDEGH 76 (395)
T ss_dssp ----CCCEECCCCSEEEEETTSCEEECCCEESCCSSCEEEEEESSSBCCTTTTTEEECT---TSCCEEESSCCG-GGCEE
T ss_pred CCcCCCCEeecCCCceEEeCCCEEEEEEEEecCCCCceEEEEECCcCcccccceEEEec---CCceEEEecCCC-CCCcE
Confidence 46788999988888888999999999999988 78889999999988765433333222 334589999998 99999
Q ss_pred EEEEeeeCCCce
Q psy2442 84 YECVAENGVGDA 95 (111)
Q Consensus 84 y~c~~~~~~~~~ 95 (111)
|.|.+.|..|..
T Consensus 77 Y~C~a~n~~g~~ 88 (395)
T 1bih_A 77 YQCFAETPAGVA 88 (395)
T ss_dssp EEEEEEETTEEE
T ss_pred EEEEEEeCCCeE
Confidence 999999987653
No 117
>2va4_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; transmembrane, phosphorylation, immunoglobulin domain, membrane, glycoprotein; HET: NAG; 1.9A {Homo sapiens} PDB: 2xy1_A*
Probab=99.47 E-value=1.7e-12 Score=70.40 Aligned_cols=91 Identities=29% Similarity=0.588 Sum_probs=68.2
Q ss_pred CCeeEEcCc--ceeeecCCcEEEEEEEeccCCCeEEEEECCeeccCCCCceEEEeCCCCCeEEEEccCCCCCCCeEEEEE
Q psy2442 10 PPEITLRPR--NQAVKAGGITSFYCIARGDPIPVIQWRKNGKRVSGTQSRYMVQEFPPGGSLLRIEPVRHARDDAVYECV 87 (111)
Q Consensus 10 ~p~~~~~~~--~~~~~~g~~~~l~c~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~g~y~c~ 87 (111)
+|.+..... .+.+..|+.+.|.|.+.+.+.+.+.|++++..+... .++.... ....|.|.++.. .|.|.|.|.
T Consensus 2 pP~i~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~-~~~~~~~---~~~~L~i~~~~~-~d~G~Y~C~ 76 (192)
T 2va4_A 2 MPAISMPQKSFNATAERGEEMTFSCRASGSPEPAISWFRNGKLIEEN-EKYILKG---SNTELTVRNIIN-SDGGPYVCR 76 (192)
T ss_dssp CCEEECSCCEEEEETTSCCCEEEECEEECSSCCEEEEEETTEECCCS-SSEEEET---TTTEEEECSCCG-GGCEEEEEE
T ss_pred CCcccCCCCCcEEEEecCCCEEEEEeeccCCCCeEEEEECCeEcCCC-ccEEEeC---CeeEEEEecCCh-hcCcEEEEE
Confidence 566654433 456778999999999999888899999999988644 4544432 344599999998 999999999
Q ss_pred eeeCCCceEeeEEEEEEec
Q psy2442 88 AENGVGDAVSAEASLTVYE 106 (111)
Q Consensus 88 ~~~~~~~~~~~~~~l~~~~ 106 (111)
+.+..+.. ...+.+.+..
T Consensus 77 ~~~~~~~~-~~~~~l~V~~ 94 (192)
T 2va4_A 77 ATNKAGED-EKQAFLQVFV 94 (192)
T ss_dssp EEETTEEE-EEEEEEEEEE
T ss_pred EEcccccc-ceEEEEEEEc
Confidence 99987653 4555555543
No 118
>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A
Probab=99.47 E-value=3.9e-12 Score=75.75 Aligned_cols=95 Identities=27% Similarity=0.502 Sum_probs=71.4
Q ss_pred CCeeEEcCcceeeecCCcEEEEEEEeccCCCeEEEEEC--CeeccCC----CCceEEEeCCCCCeEEEEccCCCCCCCeE
Q psy2442 10 PPEITLRPRNQAVKAGGITSFYCIARGDPIPVIQWRKN--GKRVSGT----QSRYMVQEFPPGGSLLRIEPVRHARDDAV 83 (111)
Q Consensus 10 ~p~~~~~~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~--~~~~~~~----~~~~~~~~~~~~~~~l~~~~~~~~~d~g~ 83 (111)
+|.+.. +....+.+|+.+.|.|.+.+.|.+.+.|+++ +..+... ..++...... ....|.|.++.. .|+|.
T Consensus 1 ~P~i~~-~~~~~~~~G~~v~l~C~~~g~p~p~v~W~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~L~i~~v~~-~D~G~ 77 (389)
T 2jll_A 1 QPHIIQ-LKNETTYENGQVTLVCDAEGEPIPEITWKRAVDGFTFTEGDKSLDGRIEVKGQH-GSSSLHIKDVKL-SDSGR 77 (389)
T ss_dssp CCEEEE-CCCEEEETTSEEEEEEEEECSSCCEEEEEETTTTEEECC--CCSSSSEEEEECS-SEEEEEEESCCG-GGCEE
T ss_pred CCeEEe-cCceEEeCCCeEEEEEEeecccCCeEEEEeCCCCceeccCcCCCCCeEEEeccC-CcceEEEcccCh-hhCEE
Confidence 355655 4446778899999999999999999999999 7776431 2455544322 345699999998 99999
Q ss_pred EEEEeeeCCCceEeeEEEEEEecCC
Q psy2442 84 YECVAENGVGDAVSAEASLTVYEGE 108 (111)
Q Consensus 84 y~c~~~~~~~~~~~~~~~l~~~~~~ 108 (111)
|.|.+.|..|.. ...+.|.|..+|
T Consensus 78 Y~C~a~n~~g~~-~~~~~l~V~~~P 101 (389)
T 2jll_A 78 YDCEAASRIGGH-QKSMYLDIEYAP 101 (389)
T ss_dssp EEEEEECSSCEE-EEEEEEEEEEEE
T ss_pred EEEEEEeCCCCc-ceEEEEEEEeCC
Confidence 999999998874 677777766543
No 119
>1f2q_A High affinity immunoglobulin epsilon receptor ALP subunit; immunoglobulin fold, glycoprotein, IGE-binding Pro immune system; HET: NAG MAN; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1j86_A* 1rpq_A* 2y7q_A* 1f6a_A* 1j88_A* 1j89_A* 1j87_A*
Probab=99.47 E-value=3.4e-12 Score=68.70 Aligned_cols=95 Identities=14% Similarity=0.100 Sum_probs=69.3
Q ss_pred eeEEecCCCeeEEcCcceeeecCCcEEEEEEEe-ccCCCeEEEEECCeeccCCCCceEEEeCCCCCeEEEEccCCCCCCC
Q psy2442 3 RKVRFLDPPEITLRPRNQAVKAGGITSFYCIAR-GDPIPVIQWRKNGKRVSGTQSRYMVQEFPPGGSLLRIEPVRHARDD 81 (111)
Q Consensus 3 ~~l~v~~~p~~~~~~~~~~~~~g~~~~l~c~~~-~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~ 81 (111)
..|.|..++.....+. ..+..|+.+.|.|.+. +.+.+.+.|++++..+.... ....|.+.++.. .|.
T Consensus 79 ~~l~V~~~~~~~~~~~-~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~~~----------~~~~L~i~~v~~-~d~ 146 (176)
T 1f2q_A 79 VYLEVFSDWLLLQASA-EVVMEGQPLFLRCHGWRNWDVYKVIYYKDGEALKYWY----------ENHNISITNATV-EDS 146 (176)
T ss_dssp EEEEEECSSEEEEESC-SEEETTSCEEEEEEEGGGCCEEEEEEEETTEECCSCC----------CSSEEEESSCCG-GGC
T ss_pred EEEEEeCcceeecCCc-ceeeCCCCEEEEEEecCCCCceEEEEEECCEEEeeec----------CCCeEEECCCCc-ccC
Confidence 3566665555443333 4677999999999994 55566899999998874321 334588999998 999
Q ss_pred eEEEEEeeeCCCceEeeEEEEEEecCCC
Q psy2442 82 AVYECVAENGVGDAVSAEASLTVYEGEE 109 (111)
Q Consensus 82 g~y~c~~~~~~~~~~~~~~~l~~~~~~~ 109 (111)
|.|.|.+.|..+...+..+.|.|.++|.
T Consensus 147 G~Y~C~a~n~~~~~~s~~~~l~V~~~p~ 174 (176)
T 1f2q_A 147 GTYYCTGKVWQLDYESEPLNITVIKAPR 174 (176)
T ss_dssp EEEEEEEEETTEEEECCCEEEEEECSCC
T ss_pred EEEEEEEEeCCcceEecCEEEEEecCCC
Confidence 9999999997554345667888887764
No 120
>2yd9_A Receptor-type tyrosine-protein phosphatase S; hydrolase; HET: NAG B3P; 2.60A {Homo sapiens}
Probab=99.47 E-value=4e-12 Score=73.58 Aligned_cols=98 Identities=43% Similarity=0.805 Sum_probs=68.5
Q ss_pred ecCCCeeEEcCcceeeecCCcEEEEEEEeccCCCeEEEEECCeeccCCCCceEEEe-CCCCCeEEEEccCCCCCCCeEEE
Q psy2442 7 FLDPPEITLRPRNQAVKAGGITSFYCIARGDPIPVIQWRKNGKRVSGTQSRYMVQE-FPPGGSLLRIEPVRHARDDAVYE 85 (111)
Q Consensus 7 v~~~p~~~~~~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~d~g~y~ 85 (111)
...+|.+...+....+..|+.+.|.|.+.+.|.+.+.|++++..+.. .++.... .++....|.|.++....|.|.|.
T Consensus 3 ~~~~P~~~~~p~~~~v~~G~~v~l~C~~~g~p~~~i~W~k~g~~i~~--~~~~~~~~~~~~~~~L~i~~~~~~~D~G~Y~ 80 (304)
T 2yd9_A 3 GEEPPRFIKEPKDQIGVSGGVASFVCQATGDPKPRVTWNKKGKKVNS--QRFETIEFDESAGAVLRIQPLRTPRDENVYE 80 (304)
T ss_dssp -CCCCEEEECCCCEEEETTSCEEEEEEEECSSCCEEEEC-------C--TTEEEEEETTTTEEEEEECSCCTTTTCSEEE
T ss_pred CccCCeeeecCCceEecCCCeEEEEEEEEEeCCCeEEEEECCEECCC--CceEEEEecCCCceEEEEecccccCCCeEEE
Confidence 34688888888888899999999999999999999999999888753 3443332 22122568888887217999999
Q ss_pred EEeeeCCCceEeeEEEEEEecC
Q psy2442 86 CVAENGVGDAVSAEASLTVYEG 107 (111)
Q Consensus 86 c~~~~~~~~~~~~~~~l~~~~~ 107 (111)
|.+.|..|.. ...+.|.|...
T Consensus 81 C~a~n~~g~~-~~~~~l~V~~~ 101 (304)
T 2yd9_A 81 CVAQNSVGEI-TVHAKLTVLRE 101 (304)
T ss_dssp EEEECSSCEE-CCEEEEEEECG
T ss_pred EEEECCCCeE-EEEEEEEEecc
Confidence 9999988763 66777777654
No 121
>3lcy_A Titin; A-BAND, IG tandem domains, ATP-binding, calmodulin-BI cardiomyopathy, disease mutation, disulfide bond, immunoglo domain, isopeptide bond; 2.50A {Homo sapiens}
Probab=99.47 E-value=3.5e-12 Score=69.38 Aligned_cols=99 Identities=14% Similarity=0.247 Sum_probs=71.2
Q ss_pred eEEecCCCeeEEc---CcceeeecCCcEEEEEEEeccCCCeEEEEECCeeccCCCCceEEEeCCCCCeEEEEccCC-CCC
Q psy2442 4 KVRFLDPPEITLR---PRNQAVKAGGITSFYCIARGDPIPVIQWRKNGKRVSGTQSRYMVQEFPPGGSLLRIEPVR-HAR 79 (111)
Q Consensus 4 ~l~v~~~p~~~~~---~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~ 79 (111)
.|.|..+|.+... .....+..|+.+.|.|.+.+.|.+.+.|++++..+... .++...... ....|.+..+. . .
T Consensus 94 ~l~v~~~p~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~-~~~~~~~~~-~~~~L~i~~~~~~-~ 170 (197)
T 3lcy_A 94 KLLLQATPQFHPGYPLKEKYYGAVGSTLRLHVMYIGRPVPAMTWFHGQKLLQNS-ENITIENTE-HYTHLVMKNVQRK-T 170 (197)
T ss_dssp EEEEEEEEEECTTSCCCSEEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCC-SSEEEEECS-SEEEEEESSCCHH-H
T ss_pred EEEEEcCCCCCCCccCCcceeecCCCeEEEEEEEeeeeCCeeEEeECCEECCCC-CceEEEEcC-CEEEEEEccccch-h
Confidence 3455544444321 23346678999999999999999999999999988643 454444322 33558888887 4 6
Q ss_pred CCeEEEEEeeeCCCceEeeEEEEEEec
Q psy2442 80 DDAVYECVAENGVGDAVSAEASLTVYE 106 (111)
Q Consensus 80 d~g~y~c~~~~~~~~~~~~~~~l~~~~ 106 (111)
|.|.|.|.+.|..|.. ...+.|.|.+
T Consensus 171 d~G~Y~C~a~n~~g~~-~~~~~l~V~~ 196 (197)
T 3lcy_A 171 HAGKYKVQLSNVFGTV-DAILDVEIQD 196 (197)
T ss_dssp HCEEEEEEEECSSCEE-EEEEEEEEEC
T ss_pred hCceEEEEEEcCcCce-EEEEEEEEec
Confidence 9999999999999875 7777777654
No 122
>1rhf_A Tyrosine-protein kinase receptor TYRO3; AXL/TYRO3 family, cellular adhesion, ligand-independent DIME mutational analysis, transferase; HET: EPE; 1.96A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4
Probab=99.46 E-value=7e-12 Score=67.58 Aligned_cols=90 Identities=26% Similarity=0.423 Sum_probs=69.5
Q ss_pred eeEEecCCCeeEEcCcceeeecCCcEEEEEEEeccCCC-eEEEEECCeeccCCCCceEEEeCCCCCeEEEEccCCCCCCC
Q psy2442 3 RKVRFLDPPEITLRPRNQAVKAGGITSFYCIARGDPIP-VIQWRKNGKRVSGTQSRYMVQEFPPGGSLLRIEPVRHARDD 81 (111)
Q Consensus 3 ~~l~v~~~p~~~~~~~~~~~~~g~~~~l~c~~~~~~~~-~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~ 81 (111)
+.|.|..+|.+...+....+..|+.+.|.|.+.+.|.+ .+.|++++..+.... . ....|.+.++ .|+
T Consensus 91 ~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~~v~W~~~~~~~~~~~-~--------~~~~L~i~~~---~d~ 158 (182)
T 1rhf_A 91 VWLTVEGVPFFTVEPKDLAVPPNAPFQLSCEAVGPPEPVTIVWWRGTTKIGGPA-P--------SPSVLNVTGV---TQS 158 (182)
T ss_dssp EEEEEECSCEEEECCCCEEECTTCCEEEEEEEECSSSCCEEEEEETTEECSCSE-E--------SSEEEEECCC---SSC
T ss_pred EEEEEecCCeEEecCcceEecCCCEEEEEeEecCCCCCCEEEEEcCCeECCCCC-C--------CceEEEEecc---ccC
Confidence 56788889998887777788899999999999999998 999999998875321 1 3344777765 578
Q ss_pred eEEEEEeeeCCCceEeeEEEEEE
Q psy2442 82 AVYECVAENGVGDAVSAEASLTV 104 (111)
Q Consensus 82 g~y~c~~~~~~~~~~~~~~~l~~ 104 (111)
|.|.|.+.|..|......+.|.|
T Consensus 159 G~Y~C~a~N~~g~~~s~~~~l~V 181 (182)
T 1rhf_A 159 TMFSCEAHNLKGLASSRTATVHL 181 (182)
T ss_dssp EEEEEEEEETTEEEECCCEEEEE
T ss_pred eEEEEEEECCCCCcccceEEEEe
Confidence 99999999998864233555544
No 123
>1f97_A Junction adhesion molecule; immunoglobulin superfamily, beta-sandwich fold, cell adhesion; 2.50A {Mus musculus} SCOP: b.1.1.1 b.1.1.4
Probab=99.45 E-value=1.5e-12 Score=71.56 Aligned_cols=100 Identities=25% Similarity=0.410 Sum_probs=71.1
Q ss_pred eeEEecCCCeeEEcCcceeeecCCcEEEEEE-EeccCCCeEEEEECCe-eccCCCC--------ceEEEeCCCCCeEEEE
Q psy2442 3 RKVRFLDPPEITLRPRNQAVKAGGITSFYCI-ARGDPIPVIQWRKNGK-RVSGTQS--------RYMVQEFPPGGSLLRI 72 (111)
Q Consensus 3 ~~l~v~~~p~~~~~~~~~~~~~g~~~~l~c~-~~~~~~~~~~w~~~~~-~~~~~~~--------~~~~~~~~~~~~~l~~ 72 (111)
..|.|..+|.+...+....+..|+.+.|.|. ..+.|.+.+.|++++. .+..... ++.... ....|.+
T Consensus 97 ~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~i~W~~~~~~~l~~~~~~~~~~~~~~~~~~~---~~~~L~i 173 (212)
T 1f97_A 97 IHLTVLVPPSKPTISVPSSVTIGNRAVLTCSEHDGSPPSEYSWFKDGISMLTADAKKTRAFMNSSFTIDP---KSGDLIF 173 (212)
T ss_dssp EEEEEEBCCCCCEEECCSEEETTSCEEEEEECSCCBSCCEEEEEETTEESBC-----CBSCSSSCEEECT---TTCCEEE
T ss_pred EEEEEEcCCCCcccCCccccCCCCeEEEEEEcccCcCCCEEEEEeCCcccccccccccccccCceeEecC---CCceEEE
Confidence 4566776766554444456789999999999 7888999999999998 7653211 122211 3445899
Q ss_pred ccCCCCCCCeEEEEEeeeCCCce-EeeEEEEEEec
Q psy2442 73 EPVRHARDDAVYECVAENGVGDA-VSAEASLTVYE 106 (111)
Q Consensus 73 ~~~~~~~d~g~y~c~~~~~~~~~-~~~~~~l~~~~ 106 (111)
.++.. .|.|.|.|.+.|..|.. .+..+.|.|.+
T Consensus 174 ~~~~~-~d~G~Y~C~a~n~~g~~~~s~~~~l~V~~ 207 (212)
T 1f97_A 174 DPVTA-FDSGEYYCQAQNGYGTAMRSEAAHMDAVE 207 (212)
T ss_dssp SSCCG-GGCEEEEEEEECSSSCCEECCCEEEEEES
T ss_pred EecCh-hhCcEEEEEEccccCCccccceEEEEEEE
Confidence 99998 99999999999998864 34566666654
No 124
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.45 E-value=6.6e-13 Score=78.40 Aligned_cols=85 Identities=21% Similarity=0.269 Sum_probs=64.1
Q ss_pred eeecCCcEEEEEEEeccCCCeEEEEECCeeccCCCCceEEEeCC------CCCeEEEEccCCCCCCCeEEEEEeeeCCCc
Q psy2442 21 AVKAGGITSFYCIARGDPIPVIQWRKNGKRVSGTQSRYMVQEFP------PGGSLLRIEPVRHARDDAVYECVAENGVGD 94 (111)
Q Consensus 21 ~~~~g~~~~l~c~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~------~~~~~l~~~~~~~~~d~g~y~c~~~~~~~~ 94 (111)
....|+.+.+.|.+.+.|.|.+.|+++|..+... ......... .....|.+..+.. .|+|.|.|.+.|..|.
T Consensus 257 ~~~~g~~v~l~C~~~g~P~p~i~W~~~g~~l~~~-~~~~~~~~~~~~~~~~~~~~L~I~~v~~-~d~G~Y~C~a~N~~G~ 334 (347)
T 2ifg_A 257 TAVEMHHWCIPFSVDGQPAPSLRWLFNGSVLNET-SFIFTEFLEPAANETVRHGCLRLNQPTH-VNNGNYTLLAANPFGQ 334 (347)
T ss_dssp CCEESSSEEEEEEEEEESCCEEEEEETTEECCCC-SSEEEEECCCCTTCCCEEEEEEESSCCG-GGCEEEEEEEEETTEE
T ss_pred cCccCceEEEEEEeeecCCCcEEEEeCCEECCCC-cceeeEEEeecCCCcccceEEEECCCCc-ccCceEEEEEecCCCc
Confidence 3457899999999999999999999999988643 222211000 0134589999998 9999999999999987
Q ss_pred eEeeEEEEEEecCC
Q psy2442 95 AVSAEASLTVYEGE 108 (111)
Q Consensus 95 ~~~~~~~l~~~~~~ 108 (111)
. ...+.+.|.++|
T Consensus 335 ~-~~~~~l~V~~~P 347 (347)
T 2ifg_A 335 A-SASIMAAFMDNP 347 (347)
T ss_dssp E-EEEEEECSCCCC
T ss_pred e-eeEEEEEecCCC
Confidence 4 777777776654
No 125
>3k0w_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1, isoform 2; hydrolase, immunoglobulin domain, nucleus, protease; 2.80A {Homo sapiens}
Probab=99.44 E-value=4.8e-12 Score=70.28 Aligned_cols=87 Identities=29% Similarity=0.418 Sum_probs=68.1
Q ss_pred CCCeeEEcCcceeeecCCcEEEEEEEeccCCCeEEEEECCeeccCCCCceEEEeCCCCCeEEEEccCCCCCCCeEEEEEe
Q psy2442 9 DPPEITLRPRNQAVKAGGITSFYCIARGDPIPVIQWRKNGKRVSGTQSRYMVQEFPPGGSLLRIEPVRHARDDAVYECVA 88 (111)
Q Consensus 9 ~~p~~~~~~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~g~y~c~~ 88 (111)
..+.+...+..+.+..|+.+.|.|.+.+.|.+.+.|++++..+... ....|.|.++.. .|.|.|.|.+
T Consensus 17 ~~~~i~~~p~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~-----------~~~~L~i~~v~~-~d~G~Y~C~~ 84 (218)
T 3k0w_A 17 RGSKITVNPESKAVLAGQFVKLCCRATGHPFVQYQWFKMNKEIPNG-----------NTSELIFNAVHV-KDAGFYVCRV 84 (218)
T ss_dssp --CCEEECCCCEEEETTSBEEEECEETTTTSSEEEEEETTEECTTC-----------CSSEEEETTCCG-GGCEEEEEEE
T ss_pred CCCEEEECCCCeEEeCCCcEEEEeeecCCCCCEEEEEECCEECCCC-----------CCCEEEEccCCh-hhCeEeEEEE
Confidence 3466777788888999999999999999888899999999887542 234488999998 9999999999
Q ss_pred eeCCCceEeeEEEEEEecC
Q psy2442 89 ENGVGDAVSAEASLTVYEG 107 (111)
Q Consensus 89 ~~~~~~~~~~~~~l~~~~~ 107 (111)
.|..+...+..+.+.+...
T Consensus 85 ~n~~~~~~s~~~~l~V~~~ 103 (218)
T 3k0w_A 85 NNNFTFEFSQWSQLDVCDI 103 (218)
T ss_dssp ECTTCCEECCCEEEEEECC
T ss_pred EcCCCCceeeEEEEEEEcc
Confidence 9987654344566666543
No 126
>3s97_C Contactin-1; carbonic anhdyrase like immunoglobulin, cell adhesion comple adhesion; HET: NAG; 2.30A {Homo sapiens}
Probab=99.44 E-value=4.1e-12 Score=69.30 Aligned_cols=88 Identities=30% Similarity=0.550 Sum_probs=66.8
Q ss_pred CCeeEEcCcceeeecCCcEEEEEEEeccCCCeEEEEECCeeccCCCCceEEEeCCCCCeEEEEccCCCCCCCeEEEEEee
Q psy2442 10 PPEITLRPRNQAVKAGGITSFYCIARGDPIPVIQWRKNGKRVSGTQSRYMVQEFPPGGSLLRIEPVRHARDDAVYECVAE 89 (111)
Q Consensus 10 ~p~~~~~~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~g~y~c~~~ 89 (111)
+|.+........+..|+.+.|.|.+.+.|.+.+.|++++..+... ..... ....|.+.++.. .|.|.|.|.+.
T Consensus 113 ~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~~~~~~~~---~~~~~---~~~~L~i~~v~~-~d~G~Y~C~a~ 185 (201)
T 3s97_C 113 PADIVVQFKDVYALMGQNVTLECFALGNPVPDIRWRKVLEPMPST---AEIST---SGAVLKIFNIQL-EDEGIYECEAE 185 (201)
T ss_dssp EEEEEEECCCEEEETTCCEEEEEEEEEESCCEEEEEETTBCCCTT---CEEET---TTTEEEECSCCG-GGCEEEEEEEE
T ss_pred CCceEecCCceEEecCCcEEEEEEccCCCCCceEEEeCCCcCCCc---eeecC---CCCEEEEccCCh-hhCEEEEEEEE
Confidence 344444444667889999999999999999999999998876532 22222 344599999998 99999999999
Q ss_pred eCCCceEeeEEEEEEe
Q psy2442 90 NGVGDAVSAEASLTVY 105 (111)
Q Consensus 90 ~~~~~~~~~~~~l~~~ 105 (111)
|..|.. ...+.|.|.
T Consensus 186 n~~g~~-~~~~~l~V~ 200 (201)
T 3s97_C 186 NIRGKD-KHQARIYVQ 200 (201)
T ss_dssp ETTEEE-EEEEEEEEE
T ss_pred ecCCce-eeeEEEEEe
Confidence 998874 666666654
No 127
>2yd9_A Receptor-type tyrosine-protein phosphatase S; hydrolase; HET: NAG B3P; 2.60A {Homo sapiens}
Probab=99.43 E-value=4.6e-12 Score=73.35 Aligned_cols=96 Identities=25% Similarity=0.503 Sum_probs=66.0
Q ss_pred eeEEec---CCCeeEEcCcceeeecCCcEEEEEEEeccCCCeEEEEECCeeccCCCCceEEEeCCCCCeEEEEccCCCCC
Q psy2442 3 RKVRFL---DPPEITLRPRNQAVKAGGITSFYCIARGDPIPVIQWRKNGKRVSGTQSRYMVQEFPPGGSLLRIEPVRHAR 79 (111)
Q Consensus 3 ~~l~v~---~~p~~~~~~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 79 (111)
+.|.|. .+|.+...+....+..|+.+.|.|.+.+.|.+.+.|++++..+.... .+.. ....|.+. .. .
T Consensus 195 ~~l~v~~~~~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~~~~l~~~~-~~~~-----~~~~L~i~--~~-~ 265 (304)
T 2yd9_A 195 ANLYVRVQNVAPRFSILPMSHEIMPGGNVNITCVAVGSPMPYVKWMQGAEDLTPED-DMPV-----GRNVLELT--DV-K 265 (304)
T ss_dssp EEEEEECCCEEEEEEECCCCBCCCTTCCEEEEEEEEEESCCEEEEEETTEECSCSS-SCCB-----SEEEEEEC--SC-C
T ss_pred EEEEEEeeccCCcEEecCCceEEcCCCeEEEEEEEeeeCCCEEEEEECCEECCCcc-cccC-----CcEEEEEc--cc-c
Confidence 345553 35666666666678899999999999999999999999998875431 1110 22224444 44 7
Q ss_pred CCeEEEEEeeeCCCceEeeEEEEEEecCC
Q psy2442 80 DDAVYECVAENGVGDAVSAEASLTVYEGE 108 (111)
Q Consensus 80 d~g~y~c~~~~~~~~~~~~~~~l~~~~~~ 108 (111)
|+|.|.|.+.|..|.. ...+.|.|.+.+
T Consensus 266 d~G~Y~C~a~N~~G~~-~~~~~l~V~~~~ 293 (304)
T 2yd9_A 266 DSANYTCVAMSSLGVI-EAVAQITVKSLP 293 (304)
T ss_dssp SCEEEEEEEEETTEEE-EEEEEEC-----
T ss_pred cCEEEEEEEEeCCCcE-EEEEEEEEecCc
Confidence 8999999999999874 777777776544
No 128
>2ec8_A MAST/stem cell growth factor receptor; glycoprotein, receptor tyrosine kinase, growth factor cytoki dimerization, transferase; HET: NAG; 3.00A {Homo sapiens} PDB: 2e9w_A*
Probab=99.43 E-value=1.9e-12 Score=79.85 Aligned_cols=104 Identities=16% Similarity=0.164 Sum_probs=77.8
Q ss_pred eeEEecCCCeeEEcCc---ceeeecCCcEEEEEEEeccCCCe-EEEEECCeeccCCCCceEEEeCCC---CCeEEEEccC
Q psy2442 3 RKVRFLDPPEITLRPR---NQAVKAGGITSFYCIARGDPIPV-IQWRKNGKRVSGTQSRYMVQEFPP---GGSLLRIEPV 75 (111)
Q Consensus 3 ~~l~v~~~p~~~~~~~---~~~~~~g~~~~l~c~~~~~~~~~-~~w~~~~~~~~~~~~~~~~~~~~~---~~~~l~~~~~ 75 (111)
+.|.|..+|.+...+. ...+..|+.+.|.|.+.+.|.+. +.|++++..+.....++......+ ....|.|.++
T Consensus 303 ~~l~V~~~p~~~~~~~~~~~~~v~~G~~v~l~C~~~g~P~p~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v 382 (524)
T 2ec8_A 303 TTLEVVDKGFINIFPMINTTVFVNDGENVDLIVEYEAFPKPEHQQWIYMNRTFTDKWEDYPKSENESNIRYVSELHLTRL 382 (524)
T ss_dssp EEEEEESSCEEEEEESSCSEEEECTTCCEEEEEEEEEESCCCEEEEESSSCBCSSSBCCEESCCSSSCCEEEEEEEECSC
T ss_pred EEEEEeccCceEeecCCCceEEEcCCCcEEEEEEEeecCCCcEEEEEECCeeccCCccceeEEccCCCceeEEEEEEeec
Confidence 4677888888765443 46788999999999999999998 999999988765432332221110 1245999999
Q ss_pred CCCCCCeEEEEEeeeCCCceEeeEEEEEEecCC
Q psy2442 76 RHARDDAVYECVAENGVGDAVSAEASLTVYEGE 108 (111)
Q Consensus 76 ~~~~d~g~y~c~~~~~~~~~~~~~~~l~~~~~~ 108 (111)
.. .|.|.|.|.+.|..|.. ...+.|.|..+|
T Consensus 383 ~~-~d~G~Y~C~a~N~~g~~-~~~~~l~V~~~P 413 (524)
T 2ec8_A 383 KG-TEGGTYTFLVSNSDVNA-AIAFNVYVNTKP 413 (524)
T ss_dssp CG-GGCEEEEEEEECSSCEE-EEEEEEEECEEE
T ss_pred Cc-ccCeEEEEEEEecCceE-EEEEEEEEecCC
Confidence 98 99999999999999874 777777776544
No 129
>2v44_A NCAM2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, IG, membrane, homphilic, glycoprotein, transmembrane; 1.77A {Homo sapiens} PDB: 2xy2_A* 2vaj_A
Probab=99.43 E-value=2e-11 Score=66.15 Aligned_cols=91 Identities=27% Similarity=0.455 Sum_probs=67.5
Q ss_pred EEcCcceeeecCCcEEEEEEEeccCCCeEEEEE-CCeeccCCCCceEEEeCCCCCeEEEEccCCCCCCCeEEEEEeeeCC
Q psy2442 14 TLRPRNQAVKAGGITSFYCIARGDPIPVIQWRK-NGKRVSGTQSRYMVQEFPPGGSLLRIEPVRHARDDAVYECVAENGV 92 (111)
Q Consensus 14 ~~~~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~g~y~c~~~~~~ 92 (111)
...+....+..|+.+.|.|...+.|. .+.|++ ++..+... .++...... ....|.|.++.. .|.|.|.|.+.|..
T Consensus 6 ~~~~~~~~v~~G~~v~L~C~~~~~p~-~v~W~~~~~~~~~~~-~~~~~~~~~-~~~~L~i~~~~~-~d~G~Y~C~~~~~~ 81 (189)
T 2v44_A 6 TISLSKVELSVGESKFFTCTAIGEPE-SIDWYNPQGEKIIST-QRVVVQKEG-VRSRLTIYNANI-EDAGIYRCQATDAK 81 (189)
T ss_dssp EESCSEEEEETTCCEEEEEEEEECCS-EEEEECTTSCBCCCC-SSEEEEEET-TEEEEEECSCCG-GGCEEEEEEEECTT
T ss_pred EecCCceEEecCCcEEEEEEeecCCe-eEEEEeCCCCccCCC-ceEEEECCC-CeEEEEEccCCc-ccCeEEEEEEEeCC
Confidence 34566678899999999999988876 899999 56655432 455444321 334699999998 99999999999987
Q ss_pred CceEeeEEEEEEecCC
Q psy2442 93 GDAVSAEASLTVYEGE 108 (111)
Q Consensus 93 ~~~~~~~~~l~~~~~~ 108 (111)
|......+.+.+..+|
T Consensus 82 g~~~~~~~~l~v~~~p 97 (189)
T 2v44_A 82 GQTQEATVVLEIYQKL 97 (189)
T ss_dssp SCEEEEEEEEEEECCC
T ss_pred CCcEEEEEEEEEecCC
Confidence 7644566677766544
No 130
>3qs9_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, hematopoietic cytokine-receptor complex, cell surface, EXTR complex; 7.80A {Homo sapiens}
Probab=99.43 E-value=1.4e-12 Score=81.00 Aligned_cols=98 Identities=13% Similarity=0.060 Sum_probs=72.2
Q ss_pred eeEEecCCCeeEEcC--cceeeecCCcEEEEEEEeccCCCeEEEEECCeeccCCCCceEEEeCCCCCeEEEEccCCCCCC
Q psy2442 3 RKVRFLDPPEITLRP--RNQAVKAGGITSFYCIARGDPIPVIQWRKNGKRVSGTQSRYMVQEFPPGGSLLRIEPVRHARD 80 (111)
Q Consensus 3 ~~l~v~~~p~~~~~~--~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d 80 (111)
+.|.|..+|.+...+ ....+..|+.+.|.|.+.+.|.|.+.|++++..+.... ++.. ....|.|..+.. .|
T Consensus 317 ~~L~V~~~p~i~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~i~W~k~g~~l~~~~-~~~~-----~~~~L~I~~v~~-~D 389 (527)
T 3qs9_E 317 ALVTIVEKGFINATNSSEDYEIDQYEEFCFSVRFKAYPQIRCTWTFSRKSFPCEQ-KGLD-----NGYSISKFCNHK-HQ 389 (527)
T ss_dssp EEEEEC--CEEECCCSCCEECCCTTCCCCEEEEEEEESCCEEEEEETTEEEECBC-CBCS-----SSSEEEEECCCT-TC
T ss_pred EEEEEEccCccccccCcccEEEcCCCeEEEEEEEEecCCCEEEEEECCEECcCCc-cccc-----CCcEEEEecCCc-cc
Confidence 567788888766444 23567789999999999999999999999999885431 2111 334588999998 99
Q ss_pred CeEEEEEeeeCCCceEeeEEEEEEecCC
Q psy2442 81 DAVYECVAENGVGDAVSAEASLTVYEGE 108 (111)
Q Consensus 81 ~g~y~c~~~~~~~~~~~~~~~l~~~~~~ 108 (111)
+|.|.|.+.|..|.. ...+.|.|..+|
T Consensus 390 ~G~YtC~A~N~~g~~-~~~~~L~V~~~P 416 (527)
T 3qs9_E 390 PGEYIFHAENDDAQF-TKMFTLNIRRKP 416 (527)
T ss_dssp CSCEEEEEEETTEEE-EEEEEEC--CCC
T ss_pred CEEEEEEEEeCCCcE-EEEEEEEEecCC
Confidence 999999999998874 667777776655
No 131
>1ugn_A LIR1, leukocyte immunoglobulin-like receptor 1; immunoglobulin-like folds, immune system; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 3d2u_D* 1g0x_A 1p7q_D 1ufu_A 1vdg_A 2gw5_A 2dyp_D 2otp_A 3q2c_A
Probab=99.43 E-value=7.9e-12 Score=68.42 Aligned_cols=100 Identities=16% Similarity=0.197 Sum_probs=61.1
Q ss_pred eeEEecC---CCeeEEcCcceeeecCCcEEEEEEEeccCCCeEEEEECCeeccCCCCceEEEeCCCCCeEEEEccCCCCC
Q psy2442 3 RKVRFLD---PPEITLRPRNQAVKAGGITSFYCIARGDPIPVIQWRKNGKRVSGTQSRYMVQEFPPGGSLLRIEPVRHAR 79 (111)
Q Consensus 3 ~~l~v~~---~p~~~~~~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 79 (111)
+.|.|.. +|.+...+. ..+..|+.++|.|.+.+. .+.+.|++++..+.....++...........|.|.++.. .
T Consensus 91 ~~l~V~~~~~~p~i~~~~~-~~v~~G~~v~L~C~~~~~-~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~L~i~~v~~-~ 167 (198)
T 1ugn_A 91 LELVVTGAYIKPTLSAQPS-PVVNSGGNVTLQCDSQVA-FDGFILCKEGEDEHPQCLNSQPHARGSSRAIFSVGPVSP-S 167 (198)
T ss_dssp EEEEEECSSCCCEEEEESC-SEEETTCCEEEEEECSSC-CSEEEEEEC------CEEEC------CCEEEEEECCCCT-T
T ss_pred EEEEEcccccCCccccCCc-cccCCCCcEEEEEecCCC-CcEEEEEECCCccCCccccccccCCCcceeEEEecccCc-c
Confidence 4566665 455544333 567899999999999887 679999999887642211111111001235599999998 9
Q ss_pred CCeEEEEEeeeCCCce----EeeEEEEEEe
Q psy2442 80 DDAVYECVAENGVGDA----VSAEASLTVY 105 (111)
Q Consensus 80 d~g~y~c~~~~~~~~~----~~~~~~l~~~ 105 (111)
|.|.|.|.+.|..+.. .+..+.|.|.
T Consensus 168 D~G~Y~C~a~n~~~~~~~s~~S~~~~l~V~ 197 (198)
T 1ugn_A 168 RRWWYRCYAYDSNSPYEWSLPSDLLELLVL 197 (198)
T ss_dssp SCEEEEEEEECTTSTTEECCCCCCEEEEEE
T ss_pred cCeEEEEEEEeCCCCccccCcCceEEEEec
Confidence 9999999999975421 1445555553
No 132
>2wv3_A Neuroplastin; igcam, membrane, glycoprotein, cell membrane, cell adhesion, transmembrane, disulfide bond, alternative splicing; HET: NAG; 1.95A {Rattus norvegicus}
Probab=99.43 E-value=1.2e-11 Score=67.18 Aligned_cols=89 Identities=20% Similarity=0.278 Sum_probs=66.0
Q ss_pred CCCeeEEcCcceeeec-CCcEEEEEEEeccCC--CeEEEEECCeeccCCCCceEEEeCCCCCeEEEEccCCCCCCCeEEE
Q psy2442 9 DPPEITLRPRNQAVKA-GGITSFYCIARGDPI--PVIQWRKNGKRVSGTQSRYMVQEFPPGGSLLRIEPVRHARDDAVYE 85 (111)
Q Consensus 9 ~~p~~~~~~~~~~~~~-g~~~~l~c~~~~~~~--~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~g~y~ 85 (111)
.+|.+...+. ..+.. |+.+.|.|.+.+.+. +.+.|++++..+....... ....|.|.++.. .|.|.|.
T Consensus 2 ~~P~i~~~~~-~~v~~~G~~v~l~C~~~~~~~~~~~v~W~~~~~~~~~~~~~~-------~~~~L~i~~~~~-~d~G~Y~ 72 (190)
T 2wv3_A 2 NEPRIVTSEE-VIIRDSLLPVTLQCNLTSSSHTLMYSYWTKNGVELTATRKNA-------SNMEYRINKPRA-EDSGEYH 72 (190)
T ss_dssp -CCEEEECCC-EECCCSSSCEEEEEEEEECSSCEEEEEEEETTEECTTCCBCC-------SEEEEEESSCCG-GGCEEEE
T ss_pred CCCcccccce-EEEccCCceEEEEEEeccCCCCceEEEEEECCEECcccceEe-------ccEEEEEecCCc-ccCEEEE
Confidence 4667665443 45556 999999999988876 6899999998876431111 234589999998 9999999
Q ss_pred EEeeeCCCceEeeEEEEEEecCC
Q psy2442 86 CVAENGVGDAVSAEASLTVYEGE 108 (111)
Q Consensus 86 c~~~~~~~~~~~~~~~l~~~~~~ 108 (111)
|.+.|. +. ....+.|.+..+|
T Consensus 73 C~~~n~-~~-~~~~~~l~V~~~p 93 (190)
T 2wv3_A 73 CVYHFV-SA-PKANATIEVKAAP 93 (190)
T ss_dssp EEEEET-TE-EEEEEEEEEECCC
T ss_pred EEEEeC-Cc-ccccEEEEEecCC
Confidence 999998 65 3677777776654
No 133
>2va4_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; transmembrane, phosphorylation, immunoglobulin domain, membrane, glycoprotein; HET: NAG; 1.9A {Homo sapiens} PDB: 2xy1_A*
Probab=99.43 E-value=1.5e-11 Score=66.62 Aligned_cols=98 Identities=26% Similarity=0.477 Sum_probs=69.8
Q ss_pred eeEEecCCCeeEEcCcceeeecCCcEEEEEEEeccCCCeEEEEEC--CeeccCC----CCceEEEeCCCCCeEEEEccCC
Q psy2442 3 RKVRFLDPPEITLRPRNQAVKAGGITSFYCIARGDPIPVIQWRKN--GKRVSGT----QSRYMVQEFPPGGSLLRIEPVR 76 (111)
Q Consensus 3 ~~l~v~~~p~~~~~~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~--~~~~~~~----~~~~~~~~~~~~~~~l~~~~~~ 76 (111)
..|.|..+|.+...+. ..+..|+.+.|.|.+.+.|.+.+.|+++ +..+... ..++...... ....|.+.++.
T Consensus 88 ~~l~V~~~p~~~~~~~-~~~~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~L~i~~~~ 165 (192)
T 2va4_A 88 AFLQVFVQPHIIQLKN-ETTYENGQVTLVCDAEGEPIPEITWKRAVDGFTFTEGDKSLDGRIEVKGQH-GSSSLHIKDVK 165 (192)
T ss_dssp EEEEEEEEEEEEEECC-EEECTTSEEEEEEEEEEESCCEEEEEETTTTEEECTTCBCTTSCEEEEEET-TEEEEEEESCC
T ss_pred EEEEEEccCcccccCc-ceEEeCCeEEEEEEecCCCCCcEEEEeCCCCceeeccccccCCcEEEeecc-CceEEEEecCC
Confidence 3466666666654433 4566799999999999999999999998 5544321 2333333211 33558999999
Q ss_pred CCCCCeEEEEEeeeCCCceEeeEEEEEE
Q psy2442 77 HARDDAVYECVAENGVGDAVSAEASLTV 104 (111)
Q Consensus 77 ~~~d~g~y~c~~~~~~~~~~~~~~~l~~ 104 (111)
. .|.|.|.|.+.|..|.. ...+.|.|
T Consensus 166 ~-~d~G~Y~C~a~n~~g~~-~~~~~l~V 191 (192)
T 2va4_A 166 L-SDSGRYDCEAASRIGGH-QKSMYLDI 191 (192)
T ss_dssp G-GGCEEEEEEEECSSCEE-EEEEEEEE
T ss_pred c-ccCEEEEEEEEecCCce-EEEEEEEe
Confidence 8 99999999999999874 66666655
No 134
>3p2t_A Leukocyte immunoglobulin-like receptor subfamily 4; LILR, IG, inhibitory receptor, disulfide, immune system; 1.70A {Homo sapiens}
Probab=99.42 E-value=1.1e-12 Score=71.81 Aligned_cols=93 Identities=15% Similarity=0.195 Sum_probs=65.2
Q ss_pred CCCeeEEcCcceeeecCCcEEEEEEEeccCCCeEEEEECCeeccCCCCceEEEeCCCCCeEEEEccCCCCCCCeEEEEEe
Q psy2442 9 DPPEITLRPRNQAVKAGGITSFYCIARGDPIPVIQWRKNGKRVSGTQSRYMVQEFPPGGSLLRIEPVRHARDDAVYECVA 88 (111)
Q Consensus 9 ~~p~~~~~~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~g~y~c~~ 88 (111)
.+|.+...+.. .+..|+.++|.|.+.+ +.+.+.|++++..+... .. ..........|.|.++.. .|+|.|.|.+
T Consensus 4 ~~P~i~~~p~~-~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~--~~-~~~~~~~~~~L~i~~v~~-~D~G~Y~C~a 77 (196)
T 3p2t_A 4 PKPTLWAEPGS-VISWGNSVTIWCQGTL-EAREYRLDKEESPAPWD--RQ-NPLEPKNKARFSIPSMTE-DYAGRYRCYY 77 (196)
T ss_dssp CCCEEEEESCS-EEETTCCEEEEEECCT-TCCEEEEEETTSCSCSE--EE-CCCSSSSEEEEEESSCCG-GGCEEEEEEE
T ss_pred CCCEEEccCCC-cCCCCCcEEEEeeCCC-CCCEEEEEECCCCCccc--cc-ccccCCceEEEEeccCCc-ccCceEEEEE
Confidence 35677666666 7889999999999888 66799999998766421 10 000001345599999998 9999999999
Q ss_pred eeCCC-ceEeeEEEEEEecC
Q psy2442 89 ENGVG-DAVSAEASLTVYEG 107 (111)
Q Consensus 89 ~~~~~-~~~~~~~~l~~~~~ 107 (111)
.|..| ...+..+.|.+.+.
T Consensus 78 ~n~~g~~~~s~~~~l~V~~~ 97 (196)
T 3p2t_A 78 RSPVGWSQPSDPLELVMTGA 97 (196)
T ss_dssp EETTEEBCCCCCEEEEEECS
T ss_pred eCCCcccCCCccEEEEecCC
Confidence 99876 22244566666543
No 135
>2vr9_A Roundabout 1, ROBO; immunoglobulin-like domain, AXON guidance, cell adhesion, immunoglobulin domain; 3.2A {Drosophila melanogaster} PDB: 2vra_A*
Probab=99.42 E-value=3.1e-12 Score=70.75 Aligned_cols=87 Identities=26% Similarity=0.491 Sum_probs=64.8
Q ss_pred eEEecC-CCeeEEcCcceeeecCCcEEEEEEE-eccCCCeEEEEECCeeccCC-------CCceEEEeCCCCCeEEEEcc
Q psy2442 4 KVRFLD-PPEITLRPRNQAVKAGGITSFYCIA-RGDPIPVIQWRKNGKRVSGT-------QSRYMVQEFPPGGSLLRIEP 74 (111)
Q Consensus 4 ~l~v~~-~p~~~~~~~~~~~~~g~~~~l~c~~-~~~~~~~~~w~~~~~~~~~~-------~~~~~~~~~~~~~~~l~~~~ 74 (111)
.|.|.. ++.+...+....+..|+.+.|.|.+ .+.|.+.+.|++++..+... ..++... ....|.|.+
T Consensus 101 ~l~v~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~~~----~~~~L~i~~ 176 (217)
T 2vr9_A 101 SLQIAVLRDDFRVEPKDTRVAKGETALLECGPPKGIPEPTLIWIKDGVPLDDLKAMSFGASSRVRIV----DGGNLLISN 176 (217)
T ss_dssp EEEECEECCSCSBCCCCEEECTTSCEEECCBCCCEESCCEEEEEETTEEECCCCCC---CCCSEEEE----TTTEEEESS
T ss_pred eEEEEEeCCCcEECCCccEEcCCCeEEEEEECCCCCCCCeEEEEECCcCCCcccccccccCCcEEec----CCCcEEEee
Confidence 444443 3444445556678899999999998 88899999999999887621 2233332 234599999
Q ss_pred CCCCCCCeEEEEEeeeCCCce
Q psy2442 75 VRHARDDAVYECVAENGVGDA 95 (111)
Q Consensus 75 ~~~~~d~g~y~c~~~~~~~~~ 95 (111)
+.. .|.|.|.|.+.|..|..
T Consensus 177 ~~~-~d~G~Y~C~a~N~~G~~ 196 (217)
T 2vr9_A 177 VEP-IDEGNYKCIAQNLVGTR 196 (217)
T ss_dssp CCS-TTCEEEEEEEEETTEEE
T ss_pred CCH-HHCeEEEEEEEccccee
Confidence 998 99999999999998864
No 136
>2ny1_B T-cell surface glycoprotein CD4; HIV, GP120, CD4, viral protein-immune system compl; HET: NAG SUC; 1.99A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 2nxz_B* 2ny0_B* 2nxy_B* 2ny2_B* 2ny3_B* 2ny4_B* 2ny5_C* 2ny6_B* 3jwd_C* 3jwo_C* 1g9m_C* 1g9n_C* 1gc1_C* 1rzj_C* 1rzk_C* 3o2d_A 3cd4_A 3lqa_C* 2b4c_C* 2qad_B* ...
Probab=99.42 E-value=4.2e-12 Score=68.68 Aligned_cols=79 Identities=13% Similarity=0.211 Sum_probs=62.7
Q ss_pred ceeeecCCcEEEEEEEeccCCCeEEEEECCeeccCCCCceEEEeCCCCCeEEEEccCCCCCCCeEEEEEeeeCCCceEee
Q psy2442 19 NQAVKAGGITSFYCIARGDPIPVIQWRKNGKRVSGTQSRYMVQEFPPGGSLLRIEPVRHARDDAVYECVAENGVGDAVSA 98 (111)
Q Consensus 19 ~~~~~~g~~~~l~c~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~g~y~c~~~~~~~~~~~~ 98 (111)
...+..|+.+.|.|.+.+.|.+.+.|++++..+. . ....|.+.++.. .|.|.|.|.+.|..+.. ..
T Consensus 106 ~~~v~~g~~~~l~C~~~~~p~~~v~W~~~~~~~~-------~-----~~~~L~i~~v~~-~d~G~Y~C~a~n~~~~~-~~ 171 (184)
T 2ny1_B 106 DTHLLQGQSLTLTLESPPGSSPSVQCRSPRGKNI-------Q-----GGKTLSVSQLEL-QDSGTWTCTVLQNQKKV-EF 171 (184)
T ss_dssp CSEEETTCCEEEEEECCTTCCCEEEEECTTSCEE-------E-----ESSEEEESSCCG-GGCEEEEEEEEETTEEE-EE
T ss_pred CceeecCCCEEEEEEcCCCCCCEEEEEeCCCccc-------c-----CceEEEEecCCc-CCCeEEEEEEEECCceE-EE
Confidence 3467899999999999888888999998765431 1 234488999998 99999999999987764 77
Q ss_pred EEEEEEecCCCCC
Q psy2442 99 EASLTVYEGEEKP 111 (111)
Q Consensus 99 ~~~l~~~~~~~~p 111 (111)
.+.|.|.+.|..|
T Consensus 172 ~~~l~V~~~p~~~ 184 (184)
T 2ny1_B 172 KIDIVVLAFQKAS 184 (184)
T ss_dssp EEEEEEECCCC--
T ss_pred EEEEEEEecCCCC
Confidence 8888888887654
No 137
>3grw_A Fibroblast growth factor receptor 3; FGFR3, protein-protein complex, receptor tyrosine kinas binding, immunoglobulin domain, kinase, membrane, nucleotid binding; HET: NAG; 2.10A {Homo sapiens}
Probab=99.42 E-value=5.8e-12 Score=70.61 Aligned_cols=93 Identities=31% Similarity=0.429 Sum_probs=63.5
Q ss_pred CcceeeecCCcEEEEEEEeccCCCeEEEEE----CCeeccCCCCceEEE-e-----CCCCCeEEEEccCCCCCCCeEEEE
Q psy2442 17 PRNQAVKAGGITSFYCIARGDPIPVIQWRK----NGKRVSGTQSRYMVQ-E-----FPPGGSLLRIEPVRHARDDAVYEC 86 (111)
Q Consensus 17 ~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~----~~~~~~~~~~~~~~~-~-----~~~~~~~l~~~~~~~~~d~g~y~c 86 (111)
+....+..|+.+.|.|.+.+.|.+.+.|++ ++..+......+... . .......|.+..+.. .|.|.|.|
T Consensus 121 ~~~~~~~~g~~v~L~C~~~~~p~p~v~W~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~-~d~G~Y~C 199 (241)
T 3grw_A 121 PANQTAVLGSDVEFHCKVYSDAQPHIQWLKHVEVNGSKVGPDGTPYVTVLKSWISESVEADVRLRLANVSE-RDGGEYLC 199 (241)
T ss_dssp TCSEECCTTCCEEEEEEEECSSCCEEEEEEECCSSSCSSCTTTCCCEEEEEEEECSBSEEEEEEEECSCCG-GGCEEEEE
T ss_pred CccceecCCCEEEEEEEEecCCCCEEEEEEcccCCCcccCCCCceeeeeeeEeeeeecCCceEEEECcCCc-ccCcEEEE
Confidence 445667789999999999999999999999 676664332221110 0 000224488999998 99999999
Q ss_pred EeeeCCCceEeeEEEEEEecCCCCC
Q psy2442 87 VAENGVGDAVSAEASLTVYEGEEKP 111 (111)
Q Consensus 87 ~~~~~~~~~~~~~~~l~~~~~~~~p 111 (111)
.+.|..|.. ...+.|.|.++|..|
T Consensus 200 ~a~N~~g~~-~~~~~l~V~~~p~~~ 223 (241)
T 3grw_A 200 RATNFIGVA-EKAFWLSVHGPRAAE 223 (241)
T ss_dssp EEECSSCEE-EEEEEEEC-------
T ss_pred EEecCcceE-EEEEEEEecCCCCCC
Confidence 999999875 778888887776543
No 138
>1fnl_A Low affinity immunoglobulin gamma FC region receptor III-B; beta sandwich, immunoglobulin-like, immune system receptor; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1e4j_A 1e4k_C* 1t83_C* 1t89_C* 3ay4_C*
Probab=99.42 E-value=4.1e-12 Score=68.34 Aligned_cols=92 Identities=15% Similarity=0.146 Sum_probs=66.9
Q ss_pred eeEEecCCCeeEEcCcceeeecCCcEEEEEEEeccCCC-eEEEEECCeeccCCCCceEEEeCCCCCeEEEEccCCCCCCC
Q psy2442 3 RKVRFLDPPEITLRPRNQAVKAGGITSFYCIARGDPIP-VIQWRKNGKRVSGTQSRYMVQEFPPGGSLLRIEPVRHARDD 81 (111)
Q Consensus 3 ~~l~v~~~p~~~~~~~~~~~~~g~~~~l~c~~~~~~~~-~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~ 81 (111)
..|.|..++.....+ ...+..|+.+.|.|.+.+.+++ .+.|++++..+... . ....|.|.++.. .|.
T Consensus 82 ~~l~V~~~~~~~~~~-~~~~~~g~~~~l~C~~~~~~~~~~~~W~k~g~~~~~~-----~-----~~~~L~i~~v~~-~d~ 149 (175)
T 1fnl_A 82 VQLEVHIGWLLLQAP-RWVFKEEDPIHLRCHSWKNTALHKVTYLQNGKDRKYF-----H-----HNSDFHIPKATL-KDS 149 (175)
T ss_dssp EEEEEECSSEEEECS-CSEEETTCCEEEEEEECTTCCCEEEEEEETTEEEEEE-----E-----ECCCEEESSCCG-GGC
T ss_pred EEEEEeCCCceeeCC-CceecCCCCEEEEEEcCCCCCceEEEEEECCeEccCC-----C-----CCCEEEEcccCh-hhC
Confidence 456666555544443 3567899999999999877665 89999998876321 0 223488999998 999
Q ss_pred eEEEEEeeeCCCceEeeEEEEEEec
Q psy2442 82 AVYECVAENGVGDAVSAEASLTVYE 106 (111)
Q Consensus 82 g~y~c~~~~~~~~~~~~~~~l~~~~ 106 (111)
|.|.|.+.|..+...+..+.|.|.+
T Consensus 150 G~Y~C~a~n~~~~~~s~~~~l~V~~ 174 (175)
T 1fnl_A 150 GSYFCRGLVGSKNVSSETVNITITQ 174 (175)
T ss_dssp EEEEEEEEETTEEEECCCEEEEEEC
T ss_pred eEEEEEEEcCCCCccCccEEEEEeC
Confidence 9999999997654445666777654
No 139
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.42 E-value=2.4e-12 Score=78.26 Aligned_cols=95 Identities=24% Similarity=0.421 Sum_probs=68.2
Q ss_pred CCeeEEcCcceeeecCCcEEEEEEEeccCCCeEEEEECCeec-cCC--CCceEEEeCCCCCeEEEEccCCCCCCCeEEEE
Q psy2442 10 PPEITLRPRNQAVKAGGITSFYCIARGDPIPVIQWRKNGKRV-SGT--QSRYMVQEFPPGGSLLRIEPVRHARDDAVYEC 86 (111)
Q Consensus 10 ~p~~~~~~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~~~~~-~~~--~~~~~~~~~~~~~~~l~~~~~~~~~d~g~y~c 86 (111)
+|.+...+....+.+|+++++.|.+ +.|.+.+.|++.+... ... ..++... ....|.|.+++. .|+|.|.|
T Consensus 341 ~P~i~~~~~~~~v~~G~~v~L~C~~-~~p~p~i~W~~~~~~~~~~~~~~~~~~~~----~~~~L~I~~v~~-~D~G~Y~C 414 (440)
T 3zyj_A 341 APVIVEPPADLNVTEGMAAELKCRA-STSLTSVSWITPNGTVMTHGAYKVRIAVL----SDGTLNFTNVTV-QDTGMYTC 414 (440)
T ss_dssp CCCEEECCCCEEECTTSCCEECCEE-SSTTSEEEEECTTSCEEESSSCCSSEEEC----TTCCEEESSCCS-TTCEEEEE
T ss_pred CCcccccccceeeccCceEEEEeec-CCCCCceEEEeCCCceeeccCCCceEEEc----cCCeEEEccCCh-hhCEEEEE
Confidence 5677777777889999999999999 5678899999854433 211 1233332 233499999998 99999999
Q ss_pred EeeeCCCceEeeEEEEEEecCCCCC
Q psy2442 87 VAENGVGDAVSAEASLTVYEGEEKP 111 (111)
Q Consensus 87 ~~~~~~~~~~~~~~~l~~~~~~~~p 111 (111)
.+.|..|.. .....+.|.+.+.+|
T Consensus 415 ~a~N~~G~~-~~~~~~~v~~~~~~~ 438 (440)
T 3zyj_A 415 MVSNSVGNT-TASATLNVTGTHHHH 438 (440)
T ss_dssp EEECSSCEE-EEEEEEEEC------
T ss_pred EEEcCCCcE-EEEEEEEEecccccc
Confidence 999999975 788888887776543
No 140
>1vca_A VCAM-D1,2, human vascular cell adhesion molecule-1; immunoglobulin superfamily, integrin-binding, cell adhesion protein; 1.80A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ij9_A 1vsc_A
Probab=99.41 E-value=2.5e-11 Score=66.84 Aligned_cols=84 Identities=18% Similarity=0.319 Sum_probs=60.9
Q ss_pred eeeecCCcEEEEEEEeccCCCeEEEEECCeeccCCCCceEEEeCCCCCeEEEEccCCCCCCCeEEEEEeeeCCCceEeeE
Q psy2442 20 QAVKAGGITSFYCIARGDPIPVIQWRKNGKRVSGTQSRYMVQEFPPGGSLLRIEPVRHARDDAVYECVAENGVGDAVSAE 99 (111)
Q Consensus 20 ~~~~~g~~~~l~c~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~g~y~c~~~~~~~~~~~~~ 99 (111)
+.+..|+.+.|.|.+.|.|.+.+.|++...... ........ ....|.|.++.. .|.|.|.|.+.|..+. .+..
T Consensus 11 ~~~~~G~~v~L~C~~~g~P~p~i~W~~~~~~~~--~~~~~~~~---~~~~L~I~~v~~-~D~G~Y~C~a~n~~~~-~~~~ 83 (202)
T 1vca_A 11 YLAQIGDSVSLTCSTTGCESPFFSWRTQIDSPL--NGKVTNEG---TTSTLTMNPVSF-GNEHSYLCTATCESRK-LEKG 83 (202)
T ss_dssp EEEETTSCEEEEEEEESCSSCEEEEEETTCCCC--SSEEEEET---TEEEEEESSCCG-GGCSEEEEEEEETTEE-EEEE
T ss_pred EEEcCCCcEEEEEeecCCCCCeEEEECCCCCCc--cceEEEcC---CccEEEECcCCH-HHCEEEEEEEEECCce-EeeE
Confidence 345589999999999999989999998432111 12222111 334599999998 9999999999998775 3677
Q ss_pred EEEEEecCCCC
Q psy2442 100 ASLTVYEGEEK 110 (111)
Q Consensus 100 ~~l~~~~~~~~ 110 (111)
+.|.|..+|..
T Consensus 84 ~~l~V~~~p~~ 94 (202)
T 1vca_A 84 IQVEIYSFPKD 94 (202)
T ss_dssp EEEEEEBCCSC
T ss_pred EEEEEEeCCCC
Confidence 78888776643
No 141
>4fom_A Poliovirus receptor-related protein 3; immunoglobulin-like domain, IG domain, cell adhesion; HET: NAG BMA MAN FUC; 3.93A {Homo sapiens}
Probab=99.40 E-value=2.4e-13 Score=78.81 Aligned_cols=96 Identities=16% Similarity=0.283 Sum_probs=69.3
Q ss_pred EEecCCCeeEEcC-cceeeecCCcEEEEEEEeccCCC-eEEEEECCeeccCCCCceEEEeCCCCCeEEEEccCCCCCCCe
Q psy2442 5 VRFLDPPEITLRP-RNQAVKAGGITSFYCIARGDPIP-VIQWRKNGKRVSGTQSRYMVQEFPPGGSLLRIEPVRHARDDA 82 (111)
Q Consensus 5 l~v~~~p~~~~~~-~~~~~~~g~~~~l~c~~~~~~~~-~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~g 82 (111)
|.|..+|.+...+ ....+..|+.+.|.|.+.+.|.| .+.|++++..+... .. . . ....+.+..+.. .|+|
T Consensus 206 l~V~~~P~~~~~~~~~~~~~~g~~v~l~C~~~g~P~p~~v~W~k~~~~~~~~-~~--~-~---~~~~l~i~~v~~-~d~G 277 (308)
T 4fom_A 206 LDIQYAPEVSVTGYDGNWFVGRKGVNLKCNADANPPPFKSVWSRLDGQWPDG-LL--A-S---DNTLHFVHPLTF-NYSG 277 (308)
T ss_dssp CCCCEEEEECCBCCCSCEETTCCSCEEECCEEEESCEEEEECCBSSSCCCSS-CB--C-S---TTEEECCSCCCS-CCCS
T ss_pred EEEecCCeeEEcccceeeeeccccEEEEEEEecCCCCcEEEEEECCeECCCc-EE--E-c---CCeEEEECCCCh-hhCE
Confidence 4455556554333 33455678899999999999888 68999988776432 11 1 0 334466778888 9999
Q ss_pred EEEEEeeeCCCceEeeEEEEEEecCCC
Q psy2442 83 VYECVAENGVGDAVSAEASLTVYEGEE 109 (111)
Q Consensus 83 ~y~c~~~~~~~~~~~~~~~l~~~~~~~ 109 (111)
.|.|.+.|..|.. +..+.|.|.++|+
T Consensus 278 ~Y~C~A~N~~G~~-~~~~~l~V~~~P~ 303 (308)
T 4fom_A 278 VYICKVTNSLGQR-SDQKVIYISDPPH 303 (308)
T ss_dssp EEEEEEEETTEEE-EEEEECCEECCC-
T ss_pred EEEEEEEeCCCcE-EEEEEEEEEcCCC
Confidence 9999999999975 8888898988885
No 142
>2ocw_A Polymeric-immunoglobulin receptor; SC, secretory, antibody, immunity, immune system; NMR {Homo sapiens} PDB: 3chn_S 3cm9_S 3chn_J 3cm9_J
Probab=99.40 E-value=1.4e-11 Score=76.80 Aligned_cols=105 Identities=15% Similarity=0.159 Sum_probs=72.9
Q ss_pred eeEEecCCCeeEEcCcceeeecCCcEEEEEEEe----ccCCCeEEEEECCeeccCCCC-----ceEEEeCCCCCeEEEEc
Q psy2442 3 RKVRFLDPPEITLRPRNQAVKAGGITSFYCIAR----GDPIPVIQWRKNGKRVSGTQS-----RYMVQEFPPGGSLLRIE 73 (111)
Q Consensus 3 ~~l~v~~~p~~~~~~~~~~~~~g~~~~l~c~~~----~~~~~~~~w~~~~~~~~~~~~-----~~~~~~~~~~~~~l~~~ 73 (111)
+.|.|...+.....+....+..|+.+.|.|.+. +.|.+.+.|+++|..+..... .+......+....|.|.
T Consensus 435 ~~l~V~~~~p~~~~~~~~~v~~G~~v~L~C~~~~~~~~~p~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~ 514 (585)
T 2ocw_A 435 VEIKIIEGEPNLKVPGNVTAVLGETLKVPCHFPCKFSSYEKYWCKWNNTGCQALPSQDEGPSKAFVNCDENSRLVSLTLN 514 (585)
T ss_pred EEEEEecCccccccCCceeEecCCcEEEEEEecCCCCCCccEEEEEeecCceeeeccCCCCCcceEEecCcccEEEEEEC
Confidence 456666543333345667888999999999986 566778999999887642211 12221111123469999
Q ss_pred cCCCCCCCeEEEEEeeeCCCceEeeEEEEEEecCC
Q psy2442 74 PVRHARDDAVYECVAENGVGDAVSAEASLTVYEGE 108 (111)
Q Consensus 74 ~~~~~~d~g~y~c~~~~~~~~~~~~~~~l~~~~~~ 108 (111)
++.. .|+|.|.|.+.|..|......+.|.|.++|
T Consensus 515 ~v~~-~d~G~Y~C~a~N~~G~~~~~~~~l~V~~~p 548 (585)
T 2ocw_A 515 LVTR-ADEGWYWCGVKQGHFYGETAAVYVAVEERK 548 (585)
T ss_pred CCCc-ccCeEEEEEeEeCCCccEEEEEEEEEEeee
Confidence 9998 999999999999988654455788887765
No 143
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=99.40 E-value=1.8e-11 Score=76.73 Aligned_cols=91 Identities=25% Similarity=0.457 Sum_probs=74.8
Q ss_pred CCeeEEcCcceeeecCCcEEEEEEEeccCCCeEEEEECCeeccCCCCceEEEeCCCCCeEEEEccCCCCCCCeEEEEEee
Q psy2442 10 PPEITLRPRNQAVKAGGITSFYCIARGDPIPVIQWRKNGKRVSGTQSRYMVQEFPPGGSLLRIEPVRHARDDAVYECVAE 89 (111)
Q Consensus 10 ~p~~~~~~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~g~y~c~~~ 89 (111)
.|.+...+....+..|+++.+.|.+.|.|.|.+.|++++..+... .++.+...+ ....|.+..+.+ .|+|.|.|.+.
T Consensus 482 ~P~~~~~~~~~~v~~G~~~~~~~~v~g~P~P~v~W~k~~~el~~s-~~~~i~~~~-~~~~L~I~~~~~-~D~G~Yt~~A~ 558 (573)
T 3uto_A 482 QPRFIVKPYGTEVGEGQSANFYCRVIASSPPVVTWHKDDRELKQS-VKYMKRYNG-NDYGLTINRVKG-DDKGEYTVRAK 558 (573)
T ss_dssp SCEEEECCCCEEECTTSCEEEEEEEECSSCCEEEEEETTEECCSS-SSEEEEEET-TEEEEEECSCCG-GGCEEEEEEEE
T ss_pred CCccccCCCCcEEeCCCcEEEEEEEEccCCCeEEEEECCEEcccC-CcEEEEEcC-CEEEEEEcCCCc-ccCcEEEEEEE
Confidence 466666677778899999999999999999999999999998654 566665433 445699999998 99999999999
Q ss_pred eCCCceEeeEEEEEE
Q psy2442 90 NGVGDAVSAEASLTV 104 (111)
Q Consensus 90 ~~~~~~~~~~~~l~~ 104 (111)
|..|.. +..+.|.|
T Consensus 559 N~~G~~-~~~v~l~V 572 (573)
T 3uto_A 559 NSYGTK-EEIVFLNV 572 (573)
T ss_dssp ETTEEE-EEEEEEEE
T ss_pred eCCCcE-EEEEEEEE
Confidence 999874 77776655
No 144
>3bp6_B Programmed cell death 1 ligand 2; PD-1, PD-L2, complex, costimulation, glycoprotein, immunoglo domain, membrane, transmembrane, receptor; 1.60A {Mus musculus} PDB: 3bp5_B 3rnq_B 3bov_A 3rnk_B
Probab=99.40 E-value=1.1e-11 Score=67.85 Aligned_cols=92 Identities=20% Similarity=0.162 Sum_probs=63.9
Q ss_pred cCcceeeecCCcEEEEEEEeccCC-----CeEEEEECCeeccCCCCceEEEeCC--CCCeEEEEccCCCCCCCeEEEEEe
Q psy2442 16 RPRNQAVKAGGITSFYCIARGDPI-----PVIQWRKNGKRVSGTQSRYMVQEFP--PGGSLLRIEPVRHARDDAVYECVA 88 (111)
Q Consensus 16 ~~~~~~~~~g~~~~l~c~~~~~~~-----~~~~w~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~~~~~~~d~g~y~c~~ 88 (111)
++..+.+..|+.+.|.|...+.+. +.+.|++.+........++.+.... .....|.|.++.. .|+|.|.|.+
T Consensus 8 p~~~v~v~~G~~v~L~C~~~~~p~~~~~~~~v~W~k~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~-~D~G~Y~C~~ 86 (202)
T 3bp6_B 8 PKEVYTVDVGSSVSLECDFDRRECTELEGIRASLQKVENDTSLQSERATLLEEQLPLGKALFHIPSVQV-RDSGQYRCLV 86 (202)
T ss_dssp SCSEEEEETTSCEEEEEEECTTC---CTTEEEEEEECC--CCCBCSSCEECGGGGGGTEEEEEECSCCG-GGCEEEEEEE
T ss_pred CCcCEEEeCCCcEEEEEEecCCCCCCccceEEEEEcCCCcccccCCceEEeeccccCCeeEEEECCCCH-HHCcEEEEEE
Confidence 334567889999999999988775 7899999444433222444443210 0224599999998 9999999999
Q ss_pred eeCCCceEeeEEEEEEecCCC
Q psy2442 89 ENGVGDAVSAEASLTVYEGEE 109 (111)
Q Consensus 89 ~~~~~~~~~~~~~l~~~~~~~ 109 (111)
.|..+.. ...+.|.|..++.
T Consensus 87 ~~~~~~~-~~~~~l~V~~~~~ 106 (202)
T 3bp6_B 87 ICGAAWD-YKYLTVKVKASYM 106 (202)
T ss_dssp EETTEEE-EEEEEEEEEBCCC
T ss_pred EeCCCcc-eEEEEEEecCCCC
Confidence 9987753 6677777776544
No 145
>3ojm_B Fibroblast growth factor receptor 2; beta trefoil motif, immunoglobulin-like domain, growth facto factor receptor, extracellular; 2.10A {Homo sapiens} PDB: 1nun_B* 3oj2_C 2fdb_P 1iil_E 1ev2_E 1e0o_B* 1ii4_E 1djs_A 3ojv_C* 1cvs_C 1fq9_C* 1evt_C
Probab=99.40 E-value=1.2e-11 Score=68.71 Aligned_cols=93 Identities=31% Similarity=0.512 Sum_probs=67.1
Q ss_pred CcceeeecCCcEEEEEEEeccCCCeEEEEE----CCeeccCCCCceE-EEeC----CCCCeEEEEccCCCCCCCeEEEEE
Q psy2442 17 PRNQAVKAGGITSFYCIARGDPIPVIQWRK----NGKRVSGTQSRYM-VQEF----PPGGSLLRIEPVRHARDDAVYECV 87 (111)
Q Consensus 17 ~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~----~~~~~~~~~~~~~-~~~~----~~~~~~l~~~~~~~~~d~g~y~c~ 87 (111)
+....+..|+.+.|.|.+.+.|.+.+.|++ ++..+........ .... ......|.+..+.. .|.|.|.|.
T Consensus 125 ~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~-~d~G~Y~C~ 203 (231)
T 3ojm_B 125 PANASTVVGGDVEFVCKVYSDAQPHIQWIKHVEKNGSKYGPDGLPYLKVLKHSGINSSNAEVLALFNVTE-ADAGEYICK 203 (231)
T ss_dssp SCCEEEETTCCEEEECCEECSSCCEEEEEEECCBTTBSBCTTSCBCEEEEEECSTTCSCTTEEEECSCCG-GGCEEEEEE
T ss_pred CCceEEEeCCcEEEEEEEecCCCCEEEEEECCCCCCccccCCCcceEeEecccccccCCccEEEEecCCH-HHCeEEEEE
Confidence 344678889999999999999999999999 6666543222111 1110 01234589999998 999999999
Q ss_pred eeeCCCceEeeEEEEEEecCCCCC
Q psy2442 88 AENGVGDAVSAEASLTVYEGEEKP 111 (111)
Q Consensus 88 ~~~~~~~~~~~~~~l~~~~~~~~p 111 (111)
+.|..|.. ...+.|.|..+|.+|
T Consensus 204 a~n~~g~~-~~~~~l~V~~~p~~p 226 (231)
T 3ojm_B 204 VSNYIGQA-NQSAWLTVLPKQQAP 226 (231)
T ss_dssp EEETTEEE-EEEEEEEEECCC---
T ss_pred EEeccceE-eeEEEEEEecCCCCC
Confidence 99999875 888888888887765
No 146
>3laf_A Deleted in colorectal cancer; netrin-1 receptor, immunoglobulin superfamily, horseshoe, AP; HET: NAG BMA; 2.40A {Rattus norvegicus}
Probab=99.40 E-value=1.9e-11 Score=72.99 Aligned_cols=99 Identities=30% Similarity=0.465 Sum_probs=73.1
Q ss_pred eeEEecCCCe------eEEcCcceeeecCCcEEEEEEEeccCCCeEEEEECCeeccCCCCceEEEeCCCCCeEEEEccCC
Q psy2442 3 RKVRFLDPPE------ITLRPRNQAVKAGGITSFYCIARGDPIPVIQWRKNGKRVSGTQSRYMVQEFPPGGSLLRIEPVR 76 (111)
Q Consensus 3 ~~l~v~~~p~------~~~~~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 76 (111)
..|.|...|. +...+....+..|+.+.|.|.+.+.|.+.+.|++++..+.....++... ....|.+.++.
T Consensus 208 ~~l~v~~~p~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~~~~~~~~~----~~~~L~i~~~~ 283 (403)
T 3laf_A 208 AEVRILSDPGLHRQLYFLQRPSNVIAIEGKDAVLECCVSGYPPPSFTWLRGEEVIQLRSKKYSLL----GGSNLLISNVT 283 (403)
T ss_dssp EEEEEECCCCCCEEEEEEECCCCEEEETTSCEEECCEEEEESCCEEEEEETTEECCCSSSSEEEE----TTTEEEECSCC
T ss_pred eeEEEecCCCcccCceEecCCCceEecCCCcEEEEEEcCCCCCCeEEEEECCeeccCCCceEEEC----CccEEEEeCCC
Confidence 3455555442 2334555677899999999999999999999999998876543444433 34459999999
Q ss_pred CCCCCeEEEEEeeeCCCceEeeEEEEEEecC
Q psy2442 77 HARDDAVYECVAENGVGDAVSAEASLTVYEG 107 (111)
Q Consensus 77 ~~~d~g~y~c~~~~~~~~~~~~~~~l~~~~~ 107 (111)
. .|.|.|.|.+.|..|.. .....+.+..+
T Consensus 284 ~-~d~G~Y~C~a~n~~g~~-~~~~~l~V~~~ 312 (403)
T 3laf_A 284 D-DDSGTYTCVVTYKNENI-SASAELTVLVP 312 (403)
T ss_dssp G-GGCEEEEEEEEETTEEE-EEEEEEEEEEE
T ss_pred H-HHCEEEEEEEEcCCCce-EEEEEEEEECC
Confidence 8 99999999999988763 66666666543
No 147
>2ghw_B Anti-SARS SCFV antibody, 80R; S protein, neutralizing antibody, virus/viral protein/antibiotic complex; 2.30A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1
Probab=99.40 E-value=3.1e-11 Score=68.07 Aligned_cols=92 Identities=18% Similarity=0.287 Sum_probs=62.2
Q ss_pred eeEEcCcceeeecCCcEEEEEEEeccCCCeEEEEE--CCeecc-----------CCCCceEEEeCCCCCeEEEEccCCCC
Q psy2442 12 EITLRPRNQAVKAGGITSFYCIARGDPIPVIQWRK--NGKRVS-----------GTQSRYMVQEFPPGGSLLRIEPVRHA 78 (111)
Q Consensus 12 ~~~~~~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~--~~~~~~-----------~~~~~~~~~~~~~~~~~l~~~~~~~~ 78 (111)
.+...+..+.+..|++++|.|.+.+.+.+.+.|++ .+..+. ....++.... ......|.|.++..
T Consensus 137 ~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~-~~~~~~L~I~~v~~- 214 (247)
T 2ghw_B 137 TLTQSPATLSLSPGERATLSCRASQSVRSNLAWYQQKPGQAPRPLIYDASTRATGIPDRFSGSG-SGTDFTLTISRLEP- 214 (247)
T ss_dssp CEEEECSEEEECTTSCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEC-SSSEEEEEECSCCG-
T ss_pred EEEccCCEEEecCCCcEEEEEEeCCCccceEEEEEECCCCCcEEEEEEeccCCCccCCCEEEec-CCCeEEEEECcCCH-
Confidence 34555666678899999999999998888999998 444321 1123454432 11334599999998
Q ss_pred CCCeEEEEEeeeCCCceEeeEEEEEEe
Q psy2442 79 RDDAVYECVAENGVGDAVSAEASLTVY 105 (111)
Q Consensus 79 ~d~g~y~c~~~~~~~~~~~~~~~l~~~ 105 (111)
.|+|.|.|.+.|..+........|.|.
T Consensus 215 ~D~G~Y~C~a~~~~~~~~g~~t~l~V~ 241 (247)
T 2ghw_B 215 EDFAVYYCQQRSNWPPTFGQGTKVEVK 241 (247)
T ss_dssp GGCEEEEEEECSSSSCEECCCEEEEEC
T ss_pred HHCEEEEEEEccCCCceEcCCEEEEEC
Confidence 999999999988543322334455554
No 148
>2v5t_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, membrane, glycoprote adhesion, transmembrane; HET: NAG; 2.00A {Homo sapiens}
Probab=99.39 E-value=1.1e-11 Score=67.10 Aligned_cols=80 Identities=18% Similarity=0.356 Sum_probs=59.5
Q ss_pred CCeeEEcCcceeeecCCcEEEEEEEeccCCCeEEEEECCeeccCC-CCceEEEeCCCCCeEEEEccCCCCCCCeEEEEEe
Q psy2442 10 PPEITLRPRNQAVKAGGITSFYCIARGDPIPVIQWRKNGKRVSGT-QSRYMVQEFPPGGSLLRIEPVRHARDDAVYECVA 88 (111)
Q Consensus 10 ~p~~~~~~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~d~g~y~c~~ 88 (111)
+|.+...+....+..|+.+.|.|...+.+.+.+.|++++..+... ..++... ....|.+.++.. .|.|.|.|.+
T Consensus 2 ~~~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~----~~~~L~i~~~~~-~d~G~Y~C~~ 76 (189)
T 2v5t_A 2 MLTFREVVSPQEFKQGEDAEVVCRVSSSPAPAVSWLYHNEEVTTISDNRFAML----ANNNLQILNINK-SDEGIYRCEG 76 (189)
T ss_dssp CCEEEECCSSEEEETTSCEEECCEEECSSCCEEEEEC-----CBCCCTTEEEC----TTSCEEETTCCG-GGCEEEEEEE
T ss_pred CceeeccCCCEEEeCCCcEEEEEEEcCCCCCEEEEEECCccceeccCCeEEEe----cCCCEEEeeCCH-hHCcEEEEEE
Confidence 567777777888999999999999999888899999988776532 2444433 233489999998 9999999999
Q ss_pred eeCCCc
Q psy2442 89 ENGVGD 94 (111)
Q Consensus 89 ~~~~~~ 94 (111)
.+..+.
T Consensus 77 ~~~~~~ 82 (189)
T 2v5t_A 77 RVEARG 82 (189)
T ss_dssp EETTTT
T ss_pred EEcCCC
Confidence 987643
No 149
>2x1w_L Vascular endothelial growth factor receptor 2; hormone-signaling protein complex, angiogenesis, glycoprotein, HOST-virus interaction, membrane; HET: NAG BMA; 2.70A {Homo sapiens} PDB: 2x1x_R*
Probab=99.39 E-value=1e-11 Score=68.71 Aligned_cols=104 Identities=17% Similarity=0.185 Sum_probs=66.9
Q ss_pred eEEecC--CCeeEEc-CcceeeecCCcEEEEEEEeccC--CCeEEEEECCeeccCCCCceEEEeC------CCCCeEEEE
Q psy2442 4 KVRFLD--PPEITLR-PRNQAVKAGGITSFYCIARGDP--IPVIQWRKNGKRVSGTQSRYMVQEF------PPGGSLLRI 72 (111)
Q Consensus 4 ~l~v~~--~p~~~~~-~~~~~~~~g~~~~l~c~~~~~~--~~~~~w~~~~~~~~~~~~~~~~~~~------~~~~~~l~~ 72 (111)
.|.|.. +|.+... +..+.+..|++++|.|.+.+.+ .+.+.|++++..+............ ......|.|
T Consensus 96 ~l~v~~~~~p~~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~~~i~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I 175 (213)
T 2x1w_L 96 IVVVVGYRIYDVVLSPSHGIELSVGEKLVLNCTARTELNVGIDFNWEYPSSKHQHKKLVNRDLKTQSGSEMKKFLSTLTI 175 (213)
T ss_dssp EEEECBCCEEEEEEESCSCEEEETTCCEEEEEEEEECTTBCCEEEEECSCSSCCSEEEEEEEECCCSSCSCEEEEEEEEE
T ss_pred EEEEeCCcccceEEcCCCCeEEcCCCCEEEEEEEECCCCCceEEEEEecCCccceEEEeccccccccCccceeeeEEEEE
Confidence 444533 2333333 3334788999999999998754 3479999987764321000000000 001234999
Q ss_pred ccCCCCCCCeEEEEEeeeCCCceEeeEEEEEEecCCC
Q psy2442 73 EPVRHARDDAVYECVAENGVGDAVSAEASLTVYEGEE 109 (111)
Q Consensus 73 ~~~~~~~d~g~y~c~~~~~~~~~~~~~~~l~~~~~~~ 109 (111)
.++.. .|+|.|.|.+.|..|.. ...+.|.|.+.|.
T Consensus 176 ~~v~~-~D~G~Y~C~a~N~~g~~-~~~~~l~V~~~p~ 210 (213)
T 2x1w_L 176 DGVTR-SDQGLYTCAASSGLMTK-KNSTFVRVHEDPI 210 (213)
T ss_dssp SSCCG-GGCEEEEEEEECSSCEE-EEEEEEEEEC---
T ss_pred CCCCc-ccCEEEEEEEecCCCcE-EEEEEEEEecccc
Confidence 99998 99999999999999875 7888888887653
No 150
>3ojm_B Fibroblast growth factor receptor 2; beta trefoil motif, immunoglobulin-like domain, growth facto factor receptor, extracellular; 2.10A {Homo sapiens} PDB: 1nun_B* 3oj2_C 2fdb_P 1iil_E 1ev2_E 1e0o_B* 1ii4_E 1djs_A 3ojv_C* 1cvs_C 1fq9_C* 1evt_C
Probab=99.38 E-value=2.7e-12 Score=71.38 Aligned_cols=93 Identities=34% Similarity=0.519 Sum_probs=68.0
Q ss_pred CCeeEEcC----cceeeecCCcEEEEEEEeccCCCeEEEEECCeeccCCCC--ceEEEeCCCCCeEEEEccCCCCCCCeE
Q psy2442 10 PPEITLRP----RNQAVKAGGITSFYCIARGDPIPVIQWRKNGKRVSGTQS--RYMVQEFPPGGSLLRIEPVRHARDDAV 83 (111)
Q Consensus 10 ~p~~~~~~----~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~~~~~d~g~ 83 (111)
+|.+...+ ....+..|+.+.|.|.+.+.+.+.+.|++++..+..... ...... ....|.|.++.. .|.|.
T Consensus 15 ~P~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~---~~~~L~i~~~~~-~d~G~ 90 (231)
T 3ojm_B 15 APYWTNTEKMEKRLHAVPAANTVKFRCPAGGNPMPTMRWLKNGKEFKQEHRIGGYKVRN---QHWSLIMESVVP-SDKGN 90 (231)
T ss_dssp EEEESCGGGGCCSCEEEETTSCEEEECCEEEESCCEEEEEETTEECCGGGSTTCCEEEG---GGTEEEECSCCG-GGCEE
T ss_pred CCccccccccCceeEEEccCCCEEEEEecccCCCCeEEEEECCccccccccccceeeec---CcceEEEecCCc-ccCEE
Confidence 45554333 556788999999999999999889999999988753211 112221 334589999998 99999
Q ss_pred EEEEeeeCCCceEeeEEEEEEecC
Q psy2442 84 YECVAENGVGDAVSAEASLTVYEG 107 (111)
Q Consensus 84 y~c~~~~~~~~~~~~~~~l~~~~~ 107 (111)
|.|.+.|..+.. ...+.+.+...
T Consensus 91 Y~C~~~n~~~~~-~~~~~l~V~~~ 113 (231)
T 3ojm_B 91 YTCVVENEYGSI-NHTYHLDVVER 113 (231)
T ss_dssp EEEEEEETTEEE-EEEEEEEEECC
T ss_pred EEEEEecccCcc-cccEEEEEEcC
Confidence 999999987764 66667776653
No 151
>2eo1_A OBSCN protein, cDNA FLJ14124 FIS, clone mamma1002498; beta-sandwich, IG-fold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.38 E-value=9.2e-12 Score=61.49 Aligned_cols=81 Identities=20% Similarity=0.325 Sum_probs=60.7
Q ss_pred ceeeecCCcEEEEEEEeccCCCeEEEEECCeeccCCCCceEEEeCCCCCeEEEEccCCCCCCCeEEEEEeeeCCCceEee
Q psy2442 19 NQAVKAGGITSFYCIARGDPIPVIQWRKNGKRVSGTQSRYMVQEFPPGGSLLRIEPVRHARDDAVYECVAENGVGDAVSA 98 (111)
Q Consensus 19 ~~~~~~g~~~~l~c~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~g~y~c~~~~~~~~~~~~ 98 (111)
.+.+..|+.+.|.|.+. .+.+.+.|++++..+... .++.+.... ....|.|.++.. .|.|.|.|.+.+. ..
T Consensus 20 ~~~v~~G~~v~L~C~~~-~p~~~v~W~k~g~~~~~~-~~~~~~~~~-~~~~L~I~~~~~-~D~G~Y~C~a~~~-----~~ 90 (102)
T 2eo1_A 20 EVQAEAGASATLSCEVA-QAQTEVTWYKDGKKLSSS-SKVRVEAVG-CTRRLVVQQAGQ-AEAGEYSCEAGGQ-----QL 90 (102)
T ss_dssp EEEEETTCCEEECCBCS-CSSSCCEEEETTEECCCC-SSEEEEEET-TEEEEEETTCCT-TTCSCEEEEETTE-----EC
T ss_pred cEEEeCCCcEEEEEEec-CCCCceEEEECCEECCCC-CCEEEEEcC-CEEEEEECCCCc-ccCEEEEEEcCCC-----cE
Confidence 35788999999999987 777899999999988654 455544311 335699999998 9999999998542 44
Q ss_pred EEEEEEecCC
Q psy2442 99 EASLTVYEGE 108 (111)
Q Consensus 99 ~~~l~~~~~~ 108 (111)
.+.|.|.+++
T Consensus 91 ~~~l~V~~p~ 100 (102)
T 2eo1_A 91 SFRLQVAGQC 100 (102)
T ss_dssp CEEEEEESCC
T ss_pred EEEEEEeCCC
Confidence 5667776654
No 152
>3r06_A Anti-mouse CD3epsilon antibody 2C11 FAB light CHA; anti-CD3epsilon, T-cell receptor, signalling, IMMU; 2.50A {Cricetulus migratorius} PDB: 3r08_L 3ld8_B 3ldb_B*
Probab=99.38 E-value=3e-11 Score=66.63 Aligned_cols=92 Identities=17% Similarity=0.241 Sum_probs=62.0
Q ss_pred CeeEEcCcceeeecCCcEEEEEEEeccCCCeEEEEECCe--ec-----------cCCCCceEEEeCCCCCeEEEEccCCC
Q psy2442 11 PEITLRPRNQAVKAGGITSFYCIARGDPIPVIQWRKNGK--RV-----------SGTQSRYMVQEFPPGGSLLRIEPVRH 77 (111)
Q Consensus 11 p~~~~~~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~~~--~~-----------~~~~~~~~~~~~~~~~~~l~~~~~~~ 77 (111)
+.+...+..+.+..|+.+.|.|.+.+.+.+.+.|++... .. .....++...... ....|.|.++..
T Consensus 2 ~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~-~~~~L~I~~v~~ 80 (213)
T 3r06_A 2 IQMTQSPSSLPASLGDRVTINCQASQDISNYLNWYQQKPGKAPKLLIYYTNKLADGVPSRFSGSGSG-RDSSFTISSLES 80 (213)
T ss_dssp CCEEEECSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEET-TEEEEEESSCCG
T ss_pred CeeEeCCCEEEecCCCcEEEEEEeCCCcCceEEEEEECCCCCcEEEEEEcCcCCCCCCCcEEEeccC-CEEEEEECCCCc
Confidence 344555667788999999999999998888999998321 10 0112455444211 334599999998
Q ss_pred CCCCeEEEEEeeeCCCceEeeEEEEEE
Q psy2442 78 ARDDAVYECVAENGVGDAVSAEASLTV 104 (111)
Q Consensus 78 ~~d~g~y~c~~~~~~~~~~~~~~~l~~ 104 (111)
.|+|.|.|.+.|..+........+.|
T Consensus 81 -~D~G~Y~C~~~~~~~~~~~~~~~l~V 106 (213)
T 3r06_A 81 -EDIGSYYCQQYYNYPWTFGPGTKLEI 106 (213)
T ss_dssp -GGCSEEEEEECSSSSCEECCCEEEEE
T ss_pred -ccCEEEEEecccCCceEEcCCceEEE
Confidence 99999999998865432233344544
No 153
>1nqb_A Single-chain antibody fragment; multivalent antibody, diabody, domain SWA immunoglobulin; 2.00A {Mus musculus} SCOP: b.1.1.1 b.1.1.1 PDB: 1lmk_A 1qnz_H
Probab=99.38 E-value=2.6e-11 Score=68.96 Aligned_cols=101 Identities=21% Similarity=0.291 Sum_probs=68.3
Q ss_pred eeEEecCCCeeEEcCcceeeecCCcEEEEEEEeccCCC-----eEEEEE--CCeecc-----------CCCCceEEEeCC
Q psy2442 3 RKVRFLDPPEITLRPRNQAVKAGGITSFYCIARGDPIP-----VIQWRK--NGKRVS-----------GTQSRYMVQEFP 64 (111)
Q Consensus 3 ~~l~v~~~p~~~~~~~~~~~~~g~~~~l~c~~~~~~~~-----~~~w~~--~~~~~~-----------~~~~~~~~~~~~ 64 (111)
..|.|..++.+...+..+.+..|++++|.|.+.+.+.+ .+.|++ .+..+. ....++......
T Consensus 114 ~~L~V~~~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~ 193 (256)
T 1nqb_A 114 TTVTVSSDIELTQTPLSLPVSLGDQASISCRSSQSIVHSNGNTYLEWYLQKPGQSPKLLIYKVSNRFSGVPDRFSGSGSG 193 (256)
T ss_dssp EEEEECCCCCEEEECSEEEECTTCCEEEEEEESSCCBCTTSCBCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEET
T ss_pred eeeeecccccEEecCcEEEEecCCcEEEEeEecCcccccccceEEEEEEECCCCCcEEEEEEeCCCCCccCCcEEEEccC
Confidence 35777777777667777788999999999999887765 899999 444321 112344433211
Q ss_pred CCCeEEEEccCCCCCCCeEEEEEeeeCCCceEeeEEEEEEe
Q psy2442 65 PGGSLLRIEPVRHARDDAVYECVAENGVGDAVSAEASLTVY 105 (111)
Q Consensus 65 ~~~~~l~~~~~~~~~d~g~y~c~~~~~~~~~~~~~~~l~~~ 105 (111)
....|.|.++.. .|+|.|.|.+.+...........|.|.
T Consensus 194 -~~~~L~I~~v~~-~DsG~Y~C~a~~~~~~~fg~gt~l~V~ 232 (256)
T 1nqb_A 194 -TDFTLKISRVEA-EDLGVYYCFQGSHVPYTFGGGTKLEIK 232 (256)
T ss_dssp -TEEEEEESSCCG-GGCEEEEEEECSSSSCEECCCEEEEEC
T ss_pred -CEEEEEECCCCh-HHCEEEEEEEccCCceEECCCEEEEEE
Confidence 334599999998 999999999987543222233445554
No 154
>3nl4_L Antigen binding fragment, immunoglobulin IGG - LI; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_L
Probab=99.37 E-value=5e-11 Score=65.73 Aligned_cols=81 Identities=21% Similarity=0.299 Sum_probs=58.4
Q ss_pred CeeEEcCcceeeecCCcEEEEEEEeccCCCeEEEEECC--eecc-----------CCCCceEEEeCCCCCeEEEEccCCC
Q psy2442 11 PEITLRPRNQAVKAGGITSFYCIARGDPIPVIQWRKNG--KRVS-----------GTQSRYMVQEFPPGGSLLRIEPVRH 77 (111)
Q Consensus 11 p~~~~~~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~~--~~~~-----------~~~~~~~~~~~~~~~~~l~~~~~~~ 77 (111)
+.+...+..+.+..|++++|.|.+.+.+.+.+.|++.. ..+. ....++...... ....|.|.++..
T Consensus 2 ~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~-~~~~L~I~~v~~ 80 (213)
T 3nl4_L 2 VVMTQTPASVSEPVGGTVTIKCQASQSISSYLAWYQQKPGQRPRLLIYETSTLASGVPSRFKGSGSG-TDFTLTISDLEC 80 (213)
T ss_dssp CCEEEECSEEEEETTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEET-TEEEEEECSCCG
T ss_pred ccEEeCCCeEEEcCCCCEEEEEEecCCCCceEEEEEECCCCCcEEEEEeCCccCCCCCccEEEecCC-CEEEEEECCCCh
Confidence 34555667788999999999999999888899999842 1110 112455544211 334599999998
Q ss_pred CCCCeEEEEEeeeCCC
Q psy2442 78 ARDDAVYECVAENGVG 93 (111)
Q Consensus 78 ~~d~g~y~c~~~~~~~ 93 (111)
.|+|.|.|.+.|..+
T Consensus 81 -~D~G~Y~C~~~~~~~ 95 (213)
T 3nl4_L 81 -ADAATYYCQSTYENP 95 (213)
T ss_dssp -GGCEEEEEEECCSST
T ss_pred -HHCEEEEEecCCCCc
Confidence 999999999988654
No 155
>3v2a_R Vascular endothelial growth factor receptor 2; IG-homology domain, vegfr-2, growth factor receptor, VEGF LI hormone-signaling protein complex, angiogenesis; 3.20A {Homo sapiens} PDB: 3v6b_R
Probab=99.37 E-value=4.6e-14 Score=90.13 Aligned_cols=97 Identities=31% Similarity=0.478 Sum_probs=0.0
Q ss_pred cCCCeeEEcCcceeeecCCcEEEEEEEeccCCCeEEEEECCeeccCCCCceEEEeCCCCCeEEEEccCCCCCCCeEEEEE
Q psy2442 8 LDPPEITLRPRNQAVKAGGITSFYCIARGDPIPVIQWRKNGKRVSGTQSRYMVQEFPPGGSLLRIEPVRHARDDAVYECV 87 (111)
Q Consensus 8 ~~~p~~~~~~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~g~y~c~ 87 (111)
..+|.+...+....+..|+.+.|.|.+.+.|.+.+.|++++..+... .++.... ....|.|.++.. .|+|.|.|.
T Consensus 664 ~~~P~~~~~~~~~~v~~g~~~~l~C~~~g~P~p~v~W~k~g~~l~~~-~~~~~~~---~~~~L~I~~v~~-~D~G~Y~C~ 738 (772)
T 3v2a_R 664 RVAPTITGNLENQTTSIGESIEVSCTASGNPPPQIMWFKDNETLVED-SGIVLKD---GNRNLTIRRVRK-EDEGLYTCQ 738 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cCCCEeecCCCceEEeCCCCEEEEEEeCccCCCeEEEEECCeECcCC-CCeEEcC---CCcEEEECcCCH-HHCEEEEEE
Confidence 56777776666677889999999999999999999999999887543 2333322 345589999998 999999999
Q ss_pred eeeCCCceEeeEEEEEEecCCCC
Q psy2442 88 AENGVGDAVSAEASLTVYEGEEK 110 (111)
Q Consensus 88 ~~~~~~~~~~~~~~l~~~~~~~~ 110 (111)
+.|..|.. ...+.|.|.++|..
T Consensus 739 a~N~~G~~-~~~~~l~V~~~p~~ 760 (772)
T 3v2a_R 739 ACSVLGCA-KVEAFFIIEGAQEK 760 (772)
T ss_dssp -----------------------
T ss_pred EEeCCcce-eEEEEEEEECCCCc
Confidence 99999975 77888888877754
No 156
>2vr9_A Roundabout 1, ROBO; immunoglobulin-like domain, AXON guidance, cell adhesion, immunoglobulin domain; 3.2A {Drosophila melanogaster} PDB: 2vra_A*
Probab=99.37 E-value=2.3e-11 Score=67.24 Aligned_cols=96 Identities=33% Similarity=0.523 Sum_probs=66.8
Q ss_pred cCCCeeEEcCcceeeecCCcEEEEEEEeccCCCeEEEEECCeeccCCC-CceEEEeCCCCCeE--EEEccCCCCCCCeEE
Q psy2442 8 LDPPEITLRPRNQAVKAGGITSFYCIARGDPIPVIQWRKNGKRVSGTQ-SRYMVQEFPPGGSL--LRIEPVRHARDDAVY 84 (111)
Q Consensus 8 ~~~p~~~~~~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~~~~~~~~~-~~~~~~~~~~~~~~--l~~~~~~~~~d~g~y 84 (111)
..+|.+...+..+.+..|+.+.|.|.+.+.|.+.+.|++++..+.... ........+ .... +.+.++.. .|.|.|
T Consensus 7 ~~~P~i~~~p~~~~v~~G~~v~L~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~-~~~~~~l~i~~v~~-~d~G~Y 84 (217)
T 2vr9_A 7 YQSPRIIEHPTDLVVKKNEPATLNCKVEGKPEPTIEWFKDGEPVSTNEKKSHRVQFKD-GALFFYRTMQGKKE-QDGGEY 84 (217)
T ss_dssp CCCCEEEECCCCEEECTTSCEEECCEEECSSCCEEEEEETTEECCCSSSSSSEEECTT-SCEEESSCCBSSSC-BCCEEE
T ss_pred cCCCEEecCCCceEEeCCCcEEEEEEcCCCCCCeEEEEECCcCccCCCccceeEEecC-CceEEEEEeccCCc-ccCceE
Confidence 457888888888889999999999999998888999999998875431 112222111 1111 24667787 999999
Q ss_pred EEEeeeCCCceEeeEEEEEEe
Q psy2442 85 ECVAENGVGDAVSAEASLTVY 105 (111)
Q Consensus 85 ~c~~~~~~~~~~~~~~~l~~~ 105 (111)
.|.+.|..|........+.+.
T Consensus 85 ~C~~~n~~g~~~~~~~~l~v~ 105 (217)
T 2vr9_A 85 WCVAKNRVGQAVSRHASLQIA 105 (217)
T ss_dssp EEEEEETTEEEECCCEEEEEC
T ss_pred EEEEecCCCccccccceEEEE
Confidence 999999876432333444443
No 157
>3u83_A Poliovirus receptor-related protein 1; nectin-1, hinge region plasiticity, cell adhesion; HET: PG6; 2.50A {Homo sapiens} PDB: 3alp_A* 3u82_B 4fmf_A* 3sku_E* 2l7j_A
Probab=99.37 E-value=2.2e-12 Score=75.34 Aligned_cols=95 Identities=17% Similarity=0.257 Sum_probs=70.1
Q ss_pred eEEecCCCeeEEc-CcceeeecCCcEEEEEEEeccCCCe-EEEEECCeeccCCCCceEEEeCCCCCeEEEEc-cCCCCCC
Q psy2442 4 KVRFLDPPEITLR-PRNQAVKAGGITSFYCIARGDPIPV-IQWRKNGKRVSGTQSRYMVQEFPPGGSLLRIE-PVRHARD 80 (111)
Q Consensus 4 ~l~v~~~p~~~~~-~~~~~~~~g~~~~l~c~~~~~~~~~-~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~d 80 (111)
.|.|..+|.+... .....+..|+.+.|.|.+.+.|.+. +.|++++..+... ... ....|.|. .+.. .|
T Consensus 225 ~l~V~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~~i~W~~~~~~~~~~---~~~-----~~~~L~i~~~v~~-~d 295 (331)
T 3u83_A 225 TLNVQYEPEVTIEGFDGNWYLQRMDVKLTCKADANPPATEYHWTTLNGSLPKG---VEA-----QNRTLFFKGPINY-SL 295 (331)
T ss_dssp ECCEEEEEEEEEECCCSCCBTTCCCEEEEEEEEEESCCCEEEEEETTBSCCTT---EEE-----ETTEEEECSCCCG-GG
T ss_pred EEEEecCCeEEEecCCCceEeCCCeEEEEEeCcCCCCCCEEEEEECCCccccc---cee-----cCcEEEEeCCCcc-cc
Confidence 4556566665533 3334577899999999999999997 9999998876532 222 22348888 8888 99
Q ss_pred CeEEEEEeeeCCCceEeeEEEEEEecCC
Q psy2442 81 DAVYECVAENGVGDAVSAEASLTVYEGE 108 (111)
Q Consensus 81 ~g~y~c~~~~~~~~~~~~~~~l~~~~~~ 108 (111)
.|.|.|.+.|..|.. ...+.|.|...+
T Consensus 296 ~G~Y~C~a~N~~G~~-~~~~~l~V~~~~ 322 (331)
T 3u83_A 296 AGTYICEATNPIGTR-SGQVEVNITEAA 322 (331)
T ss_dssp CEEEEEEEEETTEEE-EEEEEECCBC--
T ss_pred CeEEEEEEEeccccc-eEEEEEEEeccc
Confidence 999999999999875 777777776554
No 158
>2d3v_A Leukocyte immunoglobulin-like receptor subfamily A member 5 isoform 1; immunoglobulin-like fold, immune system; 1.85A {Homo sapiens}
Probab=99.36 E-value=3.8e-12 Score=69.64 Aligned_cols=93 Identities=15% Similarity=0.162 Sum_probs=64.1
Q ss_pred cCCCeeEEcCcceeeecCCcEEEEEEEeccCCCeEEEEECCeeccCCCCceEEEeCCCCCeEEEEccCCCCCCCeEEEEE
Q psy2442 8 LDPPEITLRPRNQAVKAGGITSFYCIARGDPIPVIQWRKNGKRVSGTQSRYMVQEFPPGGSLLRIEPVRHARDDAVYECV 87 (111)
Q Consensus 8 ~~~p~~~~~~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~g~y~c~ 87 (111)
..+|.+...+.. .+..|++++|.|.+.+.+. .+.|++++..+... ............|.|.++.. .|+|.|.|.
T Consensus 3 ~~~P~i~~~p~~-~v~~G~~v~L~C~~~~~~~-~~~W~k~g~~~~~~---~~~~~~~~~~~~L~i~~v~~-~D~G~Y~C~ 76 (196)
T 2d3v_A 3 LSKATLWAEPGS-VISRGNSVTIRCQGTLEAQ-EYRLVKEGSPEPWD---TQNPLEPKNKARFSIPSMTE-HHAGRYRCY 76 (196)
T ss_dssp CCBCEEEEESCS-EEETTCCEEEEEECCTTCC-EEEEEETTCSSCSE---EECCCSSTTEEEEEESSCCG-GGCEEEEEE
T ss_pred CCCCEEEeCCCC-cccCCCeEEEEEeCCCCCc-EEEEEECCCCCCcc---cccccCCccccEEEeccCCh-hHCeEEEEE
Confidence 346777766664 7889999999999887655 89999998766321 00000011345599999998 999999999
Q ss_pred eeeCCCce-EeeEEEEEEec
Q psy2442 88 AENGVGDA-VSAEASLTVYE 106 (111)
Q Consensus 88 ~~~~~~~~-~~~~~~l~~~~ 106 (111)
+.|..+.. .+..+.|.|.+
T Consensus 77 a~n~~g~~~~s~~~~l~V~~ 96 (196)
T 2d3v_A 77 YYSPAGWSEPSDPLELVVTG 96 (196)
T ss_dssp EEETTEECBCCCCEEEEEEC
T ss_pred EeCCCCcCCcCccEEEEecC
Confidence 99876521 13445566655
No 159
>2gi7_A GPVI protein; IG-like domains, blood clotting, cell adhesion; 2.40A {Homo sapiens}
Probab=99.36 E-value=1.4e-11 Score=66.81 Aligned_cols=86 Identities=17% Similarity=0.181 Sum_probs=62.8
Q ss_pred EecCCCeeEEcCcceeeecCCcEEEEEEEeccCCCeEEEEECCeeccCCCCceEEEeCCCCCeEEEEccCCCCCCCeEEE
Q psy2442 6 RFLDPPEITLRPRNQAVKAGGITSFYCIARGDPIPVIQWRKNGKRVSGTQSRYMVQEFPPGGSLLRIEPVRHARDDAVYE 85 (111)
Q Consensus 6 ~v~~~p~~~~~~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~g~y~ 85 (111)
.+..+|.+...+.. .+..|++++|.|.+.+ +.+.+.|++++... .. ....|.|.++.. .|+|.|.
T Consensus 4 ~~~~~P~i~~~p~~-~v~~G~~v~L~C~~~~-~~~~~~W~k~g~~~--------~~----~~~~L~i~~v~~-~D~G~Y~ 68 (184)
T 2gi7_A 4 GPLPKPSLQALPSS-LVPLEKPVTLRCQGPP-GVDLYRLEKLSSSR--------YQ----DQAVLFIPAMKR-SLAGRYR 68 (184)
T ss_dssp CCBCCCEEEEESCS-EEETTCCEEEEEECST-TCSEEEEEETTTCC--------EE----SSSEEEESSCCG-GGCEEEE
T ss_pred CCCCCCeEEeCCCc-cccCCCcEEEEEeCCC-CCCEEEEEECCccc--------cC----cccEEEECcCCh-hhCceEE
Confidence 34567777766664 7889999999999877 67799999987641 11 344589999998 9999999
Q ss_pred EEeeeCCCc-eEeeEEEEEEec
Q psy2442 86 CVAENGVGD-AVSAEASLTVYE 106 (111)
Q Consensus 86 c~~~~~~~~-~~~~~~~l~~~~ 106 (111)
|.+.|..|. ..+..+.|.+.+
T Consensus 69 C~a~n~~g~~~~s~~~~l~V~~ 90 (184)
T 2gi7_A 69 CSYQNGSLWSLPSDQLELVATG 90 (184)
T ss_dssp EEEEETTEEBCCCCCEEEEEES
T ss_pred EEEEcCCCccCCCCCEEEEecC
Confidence 999997642 113345555543
No 160
>3umt_A SCFV heavy chain and light chain; stability engineering, anthrax, anti-BCLA antibody, immunoglobulin fold (VH and VL domains), antibody, immune S; HET: NHE; 1.80A {Mus musculus} PDB: 1xiw_D
Probab=99.36 E-value=1.6e-11 Score=69.69 Aligned_cols=96 Identities=17% Similarity=0.249 Sum_probs=64.5
Q ss_pred CCeeEEcCcceeeecCCcEEEEEEEeccCCCeEEEEEC--Ceecc-----------CCCCceEEEeCCCCCeEEEEccCC
Q psy2442 10 PPEITLRPRNQAVKAGGITSFYCIARGDPIPVIQWRKN--GKRVS-----------GTQSRYMVQEFPPGGSLLRIEPVR 76 (111)
Q Consensus 10 ~p~~~~~~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~--~~~~~-----------~~~~~~~~~~~~~~~~~l~~~~~~ 76 (111)
++.+...+..+.+..|++++|.|.+.+.+.+.+.|++. +..+. ....++...... ....|.|.++.
T Consensus 138 ~~~~~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~-~~~~L~I~~v~ 216 (256)
T 3umt_A 138 DIQLTQSPSSLSASLGERVSITCRASQDIGSNLNWLQQKPDGTIKRLIYATSSLDSGVPKRFSGSRSG-SDYSLTISSLE 216 (256)
T ss_dssp CCCEEEECSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTCCEEEEEETTTEECTTSCTTEEEEEET-TEEEEEECSCC
T ss_pred ccEEEcCCCeEEEECCCCEEEEEEEecCCCcEEEEEEECCCCCcEEEEEeccccCCccCCCEEEecCC-CEEEEEECCCC
Confidence 56666667777889999999999999988889999984 22111 012344433211 33459999999
Q ss_pred CCCCCeEEEEEeeeCCCceEeeEEEEEEecC
Q psy2442 77 HARDDAVYECVAENGVGDAVSAEASLTVYEG 107 (111)
Q Consensus 77 ~~~d~g~y~c~~~~~~~~~~~~~~~l~~~~~ 107 (111)
. .|+|.|.|.+.+..+........|.|.+.
T Consensus 217 ~-~D~G~Y~C~~~~~~~~~fg~gt~L~V~~~ 246 (256)
T 3umt_A 217 S-EDFVDYYCLQYASSPPTFGGGTKLEIKRA 246 (256)
T ss_dssp G-GGCSEEEEEECSSSSCEECCCEEEEEC--
T ss_pred h-hHCEEEEEEEeeCCCcEECCCEEEEEECC
Confidence 8 99999999998864433233455666543
No 161
>4i0k_A CD276 antigen; immunoglobulin domain, glycoprotein, immunity, adaptive IMMU structural genomics, protein structure initiative; HET: NAG BMA MAN; 2.97A {Mus musculus}
Probab=99.36 E-value=1.5e-11 Score=68.18 Aligned_cols=94 Identities=20% Similarity=0.372 Sum_probs=59.9
Q ss_pred CeeEEcCcceeeecCCcEEEEEEE-eccCCCeEEEEEC-CeeccCCCCceEEE-eCCCCCeEEEEccCCCCCCCeEEEEE
Q psy2442 11 PEITLRPRNQAVKAGGITSFYCIA-RGDPIPVIQWRKN-GKRVSGTQSRYMVQ-EFPPGGSLLRIEPVRHARDDAVYECV 87 (111)
Q Consensus 11 p~~~~~~~~~~~~~g~~~~l~c~~-~~~~~~~~~w~~~-~~~~~~~~~~~~~~-~~~~~~~~l~~~~~~~~~d~g~y~c~ 87 (111)
|.+...+. ..+..|+.+.|.|.+ .+.|.+.+.|+++ +..+... ...... ..++....+.+..+.. .|.|.|.|.
T Consensus 112 p~i~~~~~-~~v~~G~~~~l~C~~~~g~P~~~v~W~~~~~~~~~~~-~~~~~~~~~~~~~~~l~i~~v~~-~d~G~Y~C~ 188 (222)
T 4i0k_A 112 PSMTLEPN-KDLRPGNMVTITCSSYQGYPEAEVFWKDGQGVPLTGN-VTTSQMANERGLFDVHSVLRVVL-GANGTYSCL 188 (222)
T ss_dssp CEEECCC------CCSEEEEEEEEEEEBSCCEEEEECTTSCBCCSE-EEEEEEECTTSCEEEEEEEEEEC-CTTCEEEEE
T ss_pred CcEEeCCC-ceecCCceEEEEEecccccCCCeEEEEcCCCccCCCC-cceeEEcCCCCeEEEEEEEEEEe-CCCCEEEEE
Confidence 44443332 356789999999998 7888899999984 4443321 111111 1111223367888888 999999999
Q ss_pred eeeCCCceEeeEEEEEEecCC
Q psy2442 88 AENGVGDAVSAEASLTVYEGE 108 (111)
Q Consensus 88 ~~~~~~~~~~~~~~l~~~~~~ 108 (111)
+.|..|.. .....+.|.++|
T Consensus 189 a~n~~g~~-~~~~~l~V~~~p 208 (222)
T 4i0k_A 189 VRNPVLQQ-DAHGSVTITGQP 208 (222)
T ss_dssp EEETTTTE-EEEEEEECCC--
T ss_pred EECCCCCC-ceEEEEEEeCCc
Confidence 99999874 777777776655
No 162
>1jhl_L IGG1-kappa D11.15 FV (light chain); complex(antibody-antigen); 2.40A {Mus musculus} SCOP: b.1.1.1
Probab=99.35 E-value=4.3e-11 Score=59.74 Aligned_cols=78 Identities=21% Similarity=0.295 Sum_probs=56.1
Q ss_pred eEEcCcceeeecCCcEEEEEEEeccCCCeEEEEECCe--e---cc--------CCCCceEEEeCCCCCeEEEEccCCCCC
Q psy2442 13 ITLRPRNQAVKAGGITSFYCIARGDPIPVIQWRKNGK--R---VS--------GTQSRYMVQEFPPGGSLLRIEPVRHAR 79 (111)
Q Consensus 13 ~~~~~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~~~--~---~~--------~~~~~~~~~~~~~~~~~l~~~~~~~~~ 79 (111)
+.+.+..+.+..|++++|.|...+.+.+.+.|++... . +. ....++...... ....|.|.++.. +
T Consensus 4 v~q~p~~~~~~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~-~~~~L~I~~v~~-~ 81 (108)
T 1jhl_L 4 LTQSPSYLVASPGETITINCRASKSISKSLAWYQEKPGKTNNLLIYSGSTLQSGIPSRFSGSGSG-TDFTLTISSLEP-E 81 (108)
T ss_dssp EEEECSEEEECTTSCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEESS-SEEEEEECSCCT-T
T ss_pred eeccCCeeEEcCCCCEEEEeEECCCCCceEEEEEECCCCCCEEEEEcCCCcCCCCCceEEEEecC-CEEEEEECCCCH-H
Confidence 3455666788999999999999988888999998531 1 10 112455544311 334599999998 9
Q ss_pred CCeEEEEEeeeCC
Q psy2442 80 DDAVYECVAENGV 92 (111)
Q Consensus 80 d~g~y~c~~~~~~ 92 (111)
|+|.|.|.+.|..
T Consensus 82 DsG~Y~C~~~n~~ 94 (108)
T 1jhl_L 82 DFAMYICQQHNEY 94 (108)
T ss_dssp CCSEEEEEECSSS
T ss_pred HCEEEEEEEccCC
Confidence 9999999998863
No 163
>1nbq_A JAM, junctional adhesion molecule 1, PAM-1; reovirus receptor, tight junction formation, immunoglobulin superfamily, immune system; 2.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4 PDB: 3eoy_G
Probab=99.35 E-value=7.5e-13 Score=72.63 Aligned_cols=97 Identities=23% Similarity=0.411 Sum_probs=67.5
Q ss_pred eEEecCCCeeEEcCcceeeecCCcEEEEEEE-eccCCCeEEEEECCeeccCCCC--------ceEEEeCCCCCeEEEEcc
Q psy2442 4 KVRFLDPPEITLRPRNQAVKAGGITSFYCIA-RGDPIPVIQWRKNGKRVSGTQS--------RYMVQEFPPGGSLLRIEP 74 (111)
Q Consensus 4 ~l~v~~~p~~~~~~~~~~~~~g~~~~l~c~~-~~~~~~~~~w~~~~~~~~~~~~--------~~~~~~~~~~~~~l~~~~ 74 (111)
.|.|..+|.+........+..|+.+.|.|.+ .+.|.+.+.|++++..+..... ++.... ....|.+.+
T Consensus 101 ~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~L~i~~ 177 (209)
T 1nbq_A 101 KLIVLVPPSKPTVNIPSSATIGNRAVLTCSEQDGSPPSEYTWFKDGIVMPTNPKSTRAFSNSSYVLNP---TTGELVFDP 177 (209)
T ss_dssp ECCEEBCCCCCCCCCBSEEETTSCEEECCCCCSCBSCCEEEEEETTCCCCSCSSSSSSCTTCCCCCCT---TTCCEEESS
T ss_pred EEEEecCCcCCCcccccceecCCEEEEEEeCCCCCCCceeEEEECCeeCCCccccceeeeccceEEcC---CcceEEEEe
Confidence 4556666665444444567889999999996 8889999999999887753211 111110 234589999
Q ss_pred CCCCCCCeEEEEEeeeCCCce-EeeEEEEEE
Q psy2442 75 VRHARDDAVYECVAENGVGDA-VSAEASLTV 104 (111)
Q Consensus 75 ~~~~~d~g~y~c~~~~~~~~~-~~~~~~l~~ 104 (111)
+.. .|.|.|.|.+.|..|.. .+..+.|.|
T Consensus 178 ~~~-~d~G~Y~C~a~n~~g~~~~s~~v~l~V 207 (209)
T 1nbq_A 178 LSA-SDTGEYSCEARNGYGTPMTSNAVRMEA 207 (209)
T ss_dssp CCG-GGCCCEEEEEECSSSCCEECCCBCCEE
T ss_pred ccc-cCCeEEEEEEeCCcCcccccccEEEEE
Confidence 998 99999999999998864 233444443
No 164
>3ry4_A Low affinity immunoglobulin gamma FC region recep; FC receptor, CD32, immunoglobulin superfamily, low responder polymorphism, cell membrane; HET: NAG; 1.50A {Homo sapiens} PDB: 1fcg_A 3ry5_A 1h9v_A 3d5o_F* 3ry6_C* 2fcb_A
Probab=99.35 E-value=2.1e-11 Score=65.09 Aligned_cols=90 Identities=18% Similarity=0.244 Sum_probs=64.7
Q ss_pred eeEEecCCCeeEEcCcceeeecCCcEEEEEEEe-ccCCCeEEEEECCeeccCCCCceEEEeCCCCCeEEEEccCCCCCCC
Q psy2442 3 RKVRFLDPPEITLRPRNQAVKAGGITSFYCIAR-GDPIPVIQWRKNGKRVSGTQSRYMVQEFPPGGSLLRIEPVRHARDD 81 (111)
Q Consensus 3 ~~l~v~~~p~~~~~~~~~~~~~g~~~~l~c~~~-~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~ 81 (111)
..|.|..++.+...+ ...+..|+.+.|.|.+. +.+.+.+.|++++..+... . ....|.+..+.. .|.
T Consensus 79 ~~l~v~~~~~~~~~~-~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~~-------~---~~~~L~i~~v~~-~d~ 146 (170)
T 3ry4_A 79 VHLTVLFEWLVLQTP-HLEFQEGETIMLRCHSWKDKPLVKVTFFQNGKSQKFS-------H---LDPTFSIPQANH-SHS 146 (170)
T ss_dssp EEEEEECCSEEEECS-CSEECTTCCEEEEEEEGGGCCEEEEEEEETTEEEEEE-------S---SCCEEEESSCCG-GGC
T ss_pred EEEEEECCceEecCC-CceeecCCeEEEEEECCCCCCCceEEEEECCeEcccc-------C---CCCeEEEEeccc-cCC
Confidence 456677666554444 35677899999999994 4555789999988875321 0 234488999998 999
Q ss_pred eEEEEEeeeCCCceEeeEEEEEE
Q psy2442 82 AVYECVAENGVGDAVSAEASLTV 104 (111)
Q Consensus 82 g~y~c~~~~~~~~~~~~~~~l~~ 104 (111)
|.|.|.+.|..|...+..+.|.|
T Consensus 147 G~Y~C~a~n~~g~~~s~~~~l~V 169 (170)
T 3ry4_A 147 GDYHCTGNIGYTLFSSKPVTITV 169 (170)
T ss_dssp EEEEEEEEETTEEEECCCEEEEE
T ss_pred EEEEEEEEeCcCccccccEEEEE
Confidence 99999999988753355555544
No 165
>1f97_A Junction adhesion molecule; immunoglobulin superfamily, beta-sandwich fold, cell adhesion; 2.50A {Mus musculus} SCOP: b.1.1.1 b.1.1.4
Probab=99.35 E-value=2e-11 Score=67.06 Aligned_cols=93 Identities=17% Similarity=0.263 Sum_probs=67.1
Q ss_pred eeEEcCcceeeecCCcEEEEEEEeccCCCeEEEEECCeec-----------cCCCCceEEEeCCCCCeEEEEccCCCCCC
Q psy2442 12 EITLRPRNQAVKAGGITSFYCIARGDPIPVIQWRKNGKRV-----------SGTQSRYMVQEFPPGGSLLRIEPVRHARD 80 (111)
Q Consensus 12 ~~~~~~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~~~~~-----------~~~~~~~~~~~~~~~~~~l~~~~~~~~~d 80 (111)
.+...+..+.+..|+.+.|.|...+.+.+.+.|++++..+ .....++... . ..|.|.++.. .|
T Consensus 3 ~v~~~~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~r~~~~----~-~~L~i~~v~~-~D 76 (212)
T 1f97_A 3 SVYTAQSDVQVPENESIKLTCTYSGFSSPRVEWKFVQGSTTALVCYNSQITAPYADRVTFS----S-SGITFSSVTR-KD 76 (212)
T ss_dssp EEECSCSEEEEETTCCEEEECEEESCSSEEEEEEEEETTEEEEEEETTEECGGGTTTEEEE----T-TEEEESCCCG-GG
T ss_pred eEEecCCCeEEEcCCCEEEEeEeCCCCCcEEEEEECCCceeeEEecCCcccccccCcEEee----c-eeEEEcccCc-cc
Confidence 3445566678899999999999998888899999876542 1112344332 2 4589999998 99
Q ss_pred CeEEEEEeeeCCCc-eEeeEEEEEEecCCCC
Q psy2442 81 DAVYECVAENGVGD-AVSAEASLTVYEGEEK 110 (111)
Q Consensus 81 ~g~y~c~~~~~~~~-~~~~~~~l~~~~~~~~ 110 (111)
.|.|.|.+.+..|. .....+.|.+..+|..
T Consensus 77 ~G~Y~C~~~~~~g~~~~~~~~~l~V~~~p~~ 107 (212)
T 1f97_A 77 NGEYTCMVSEEGGQNYGEVSIHLTVLVPPSK 107 (212)
T ss_dssp CEEEEEEEEETTSSSEEEEEEEEEEEBCCCC
T ss_pred CeEEEEEEEccCCCcccEEEEEEEEEcCCCC
Confidence 99999999997652 1255677777776643
No 166
>3khq_A B-cell antigen receptor complex-associated protei chain; CD79B, CD79A, IG-beta, BCR, IG domain, V-SET, immunoglobulin protein binding; HET: FLC GSH; 1.70A {Mus musculus} PDB: 3kho_A*
Probab=99.35 E-value=3.5e-11 Score=62.35 Aligned_cols=94 Identities=18% Similarity=0.312 Sum_probs=62.1
Q ss_pred CeeEEcCcceeeecCCcEEEEEEEeccCCCeEEEEEC--Cee---ccCCCCceEEEeCCCCCeEEEEccCCCCCCCeEEE
Q psy2442 11 PEITLRPRNQAVKAGGITSFYCIARGDPIPVIQWRKN--GKR---VSGTQSRYMVQEFPPGGSLLRIEPVRHARDDAVYE 85 (111)
Q Consensus 11 p~~~~~~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~--~~~---~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~g~y~ 85 (111)
..+.+.+..+.+..|++++|.|...+. +.+.|++. +.. +.....++...... ....|.|.+++. +|+|.|.
T Consensus 18 ~~v~q~p~~~~v~~G~~v~L~C~~~~~--~~v~W~r~~~g~~~~~l~~~~~r~~~~~~~-~~~~L~I~~~~~-~DsG~Y~ 93 (133)
T 3khq_A 18 SQIWQHPRFAAKKRSSMVKFHCYTNHS--GALTWFRKRGSQQPQELVSEEGRIVQTQNG-SVYTLTIQNIQY-EDNGIYF 93 (133)
T ss_dssp CSEEEECSEEEECTTCCEEEEEEESSS--SCEEEEEECTTSCCEECCCTTTTEEEEEET-TEEEEEECSCCG-GGCEEEE
T ss_pred CceEEcCceEEEeCCCeEEEEEEeCCC--CEEEEEEeCCCCCCEEEEEeCCCEEEEcCC-CEEEEEECCCCh-HHCEEEE
Confidence 355666777889999999999999876 78999986 222 11123566654322 334599999998 9999999
Q ss_pred EEeeeCCCc---eEeeEEEEEEecCC
Q psy2442 86 CVAENGVGD---AVSAEASLTVYEGE 108 (111)
Q Consensus 86 c~~~~~~~~---~~~~~~~l~~~~~~ 108 (111)
|.+.|..|. .......|.|.+.|
T Consensus 94 C~a~n~~g~~~~~~g~gt~L~V~~~p 119 (133)
T 3khq_A 94 CKQKCDSANHNVTDSCGTELLVLGFS 119 (133)
T ss_dssp EEESSCC-------CCCEEEEEC---
T ss_pred EEEEeCCCCcceeECCCEEEEEEecc
Confidence 999887541 01233455555443
No 167
>1e07_A Carcinoembryonic antigen; glycoprotein, CEA, tumour marker, immunoglobulin-fold; NMR {Homo sapiens} PDB: 2dks_A
Probab=99.35 E-value=3.8e-11 Score=75.71 Aligned_cols=88 Identities=18% Similarity=0.353 Sum_probs=68.3
Q ss_pred eeEEecCCC-eeEEcCcceeeecCCcEEEEEEEeccCCCeEEEEECCeeccCCCCceEEEeCCCCCeEEEEccCCCCCCC
Q psy2442 3 RKVRFLDPP-EITLRPRNQAVKAGGITSFYCIARGDPIPVIQWRKNGKRVSGTQSRYMVQEFPPGGSLLRIEPVRHARDD 81 (111)
Q Consensus 3 ~~l~v~~~p-~~~~~~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~ 81 (111)
+.|.|..+| .+...+....+..|+.+.|.|.+.+.|.+.+.|+++|..+.. ...|.+.++.. .|.
T Consensus 551 ~~l~V~~~p~~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~v~W~~~g~~i~~-------------~~~L~i~~~~~-~d~ 616 (642)
T 1e07_A 551 VTLDVLYGPDTPIISPPDSSYLSGANLNLSCHSASNPSPQYSWRINGIPQQH-------------TQVLFIAKITP-NNN 616 (642)
T ss_pred EEEEEEeCCCcceecCCceeEEcCCcEEEEEEeccCCCCeEEEEECCEECcc-------------CceEEECcccc-cCC
Confidence 467776544 344556667888999999999999999999999999887642 12378888888 999
Q ss_pred eEEEEEeeeCCCceEeeEEEEEEe
Q psy2442 82 AVYECVAENGVGDAVSAEASLTVY 105 (111)
Q Consensus 82 g~y~c~~~~~~~~~~~~~~~l~~~ 105 (111)
|.|.|.+.|..|.. .....+.|.
T Consensus 617 G~Y~C~a~N~~G~~-~~s~~l~V~ 639 (642)
T 1e07_A 617 GTYACFVSNLATGR-NNSIVKSIT 639 (642)
T ss_pred eEEEEEEEecccCc-ceeEEEEEE
Confidence 99999999999874 555555543
No 168
>2wim_A N-CAM 2, NCAM2, neural cell adhesion molecule 2; cell membrane, transmembrane, immunoglobulin; HET: NDG NAG; 3.00A {Homo sapiens}
Probab=99.34 E-value=7.8e-11 Score=67.62 Aligned_cols=96 Identities=26% Similarity=0.431 Sum_probs=71.2
Q ss_pred CCCeeEEcCcceeeecCCcEEEEEEEeccCCCeEEEEE-CCeeccCCCCceEEEeCCCCCeEEEEccCCCCCCCeEEEEE
Q psy2442 9 DPPEITLRPRNQAVKAGGITSFYCIARGDPIPVIQWRK-NGKRVSGTQSRYMVQEFPPGGSLLRIEPVRHARDDAVYECV 87 (111)
Q Consensus 9 ~~p~~~~~~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~g~y~c~ 87 (111)
.+|.+...+....+..|+.+.|.|.+.+.|. .+.|++ ++..+... .++...... ....|.|.++.. .|.|.|.|.
T Consensus 3 ~~p~v~~~~~~~~v~~G~~v~l~C~~~~~p~-~v~W~~~~g~~~~~~-~~~~~~~~~-~~~~L~i~~~~~-~D~G~Y~C~ 78 (291)
T 2wim_A 3 ALLQVTISLSKVELSVGESKFFTCTAIGEPE-SIDWYNPQGEKIIST-QRVVVQKEG-VRSRLTIYNANI-EDAGIYRCQ 78 (291)
T ss_dssp CCCEEEESCSEEEEETTCCEEEEEEEESCCS-EEECBCTTCCBCCCB-TTEEEEEET-TEEEEEECSCCG-GGCEEEEEE
T ss_pred CCceEEEeccceEecCCCcEEEEEEEeCCCC-ceEEECCCCcCccCC-CcEEEecCC-CEEEEEEccCCc-ccCEEEEEE
Confidence 4677777888888999999999999998764 899998 55555432 455443211 335699999998 999999999
Q ss_pred eeeCCCceEeeEEEEEEecCC
Q psy2442 88 AENGVGDAVSAEASLTVYEGE 108 (111)
Q Consensus 88 ~~~~~~~~~~~~~~l~~~~~~ 108 (111)
+.|..|......+.+.+..++
T Consensus 79 ~~n~~g~~~~~~~~l~v~~~~ 99 (291)
T 2wim_A 79 ATDAKGQTQEATVVLEIYQKL 99 (291)
T ss_dssp EECSSSCEEEEEEEEEEECCC
T ss_pred EecccCceEEEEEEEEecCCc
Confidence 999887654556666666554
No 169
>3sbw_C Programmed cell death 1 ligand 1; PD-1, PD-L1, B7-H1, programmed death-1 ligand 1, complex, costimulatory, immune system; 2.28A {Homo sapiens} PDB: 3fn3_A 3bis_A 3bik_A
Probab=99.34 E-value=1.9e-11 Score=67.72 Aligned_cols=103 Identities=13% Similarity=0.109 Sum_probs=60.9
Q ss_pred eeEEecCCCeeEEcCcceeeecCCcEEEEEEEeccCCCeEEEEEC-CeeccCCCCceEEEeC-CCCCeEEEEccCCCCCC
Q psy2442 3 RKVRFLDPPEITLRPRNQAVKAGGITSFYCIARGDPIPVIQWRKN-GKRVSGTQSRYMVQEF-PPGGSLLRIEPVRHARD 80 (111)
Q Consensus 3 ~~l~v~~~p~~~~~~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~-~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~d 80 (111)
++|.|..++..........+..|+.+.|.|.+.+.|.+.+.|+++ +..+... ........ ++.........+.. .|
T Consensus 109 ~~l~V~~~~~~~~~~~~~~~~~g~~v~L~C~~~g~P~p~i~W~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~l~v~~-~d 186 (222)
T 3sbw_C 109 ITVKVNAPYNKINQRILVVDPVTSEHELTCQAEGYPKAEVIWTSSDHQVLSGK-TTTTNSKREEKLFNVTSTLRINT-TT 186 (222)
T ss_dssp EEEEEEBCCCCCEEEEEEEETTTTEEEEEEEEEEBSCCEEEEEETTCCEECCE-EEEEECC----CEEEEEEEEEEC-CT
T ss_pred EEEEEECCCCCCCceeeeeecCCCcEEEEEEecCCCCCeEEEEECCCceecCc-cceEEEcCCCCCEEEEEEEEEec-cC
Confidence 345565444322111112456799999999999999999999998 5444321 11111110 00111122224455 88
Q ss_pred CeEEEEEeeeCCCceEeeEEEEEEecCC
Q psy2442 81 DAVYECVAENGVGDAVSAEASLTVYEGE 108 (111)
Q Consensus 81 ~g~y~c~~~~~~~~~~~~~~~l~~~~~~ 108 (111)
.|.|.|.+.|..|.. .....+.+.+.|
T Consensus 187 ~g~Y~C~a~n~~g~~-~~~~~l~v~~~p 213 (222)
T 3sbw_C 187 NEIFYCTFRRLDPEE-NHTAELVIPELP 213 (222)
T ss_dssp TCEEEEEEEETTTTE-EEEEEEECCCC-
T ss_pred CcEEEEEEEeCccce-eeEEEEEecCCc
Confidence 999999999999874 777777766444
No 170
>1itb_B Type 1 interleukin-1 receptor; immunoglobulin fold, transmembrane, glycoprotein, signal, complex (immunoglobulin/receptor); 2.50A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ira_Y* 4dep_B* 1g0y_R
Probab=99.34 E-value=6.9e-11 Score=68.64 Aligned_cols=94 Identities=22% Similarity=0.341 Sum_probs=67.9
Q ss_pred CCCeeEEcCcc-eeeecCCcEEEEEEEeccCCCeEEEEECCeeccCCCC----ceEEEeCCC------CCeEEEEccCCC
Q psy2442 9 DPPEITLRPRN-QAVKAGGITSFYCIARGDPIPVIQWRKNGKRVSGTQS----RYMVQEFPP------GGSLLRIEPVRH 77 (111)
Q Consensus 9 ~~p~~~~~~~~-~~~~~g~~~~l~c~~~~~~~~~~~w~~~~~~~~~~~~----~~~~~~~~~------~~~~l~~~~~~~ 77 (111)
.+|.+...+.. +.+..|+.+.|.|.+.+.|.+.+.|+++|..+..... .+....... ....|.|.++..
T Consensus 207 ~~P~~~~~~~~~~~~~~g~~v~l~C~~~g~P~p~i~W~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~ 286 (315)
T 1itb_B 207 TRPVIVSPANETMEVDLGSQIQLICNVTGQLSDIAYWKWNGSVIDEDDPVLGEDYYSVENPANKRRSTLITVLNISEIES 286 (315)
T ss_dssp CCCEECSCCSEEEECCSSSCEEEEEEEEECTTSEEEEEETTEECCTTCSSEEEEEEEECCSSCGGGEEEEEEEEESSCCG
T ss_pred CCCEEecCCCCcEEEeCCCcEEEEEEEecCCCCeeEEEECCEECCcccccccccceeeeccCCCceeEEEEEEEEeecCH
Confidence 56666544432 4678999999999999999999999999998865421 111111000 123599999998
Q ss_pred CCC-CeEEEEEeeeCCCceEeeEEEEEE
Q psy2442 78 ARD-DAVYECVAENGVGDAVSAEASLTV 104 (111)
Q Consensus 78 ~~d-~g~y~c~~~~~~~~~~~~~~~l~~ 104 (111)
.| .|.|.|.+.|..|.. ...+.|.+
T Consensus 287 -~d~~G~Y~C~a~N~~G~~-~~~~~l~v 312 (315)
T 1itb_B 287 -RFYKHPFTCFAKNTHGID-AAYIQLIY 312 (315)
T ss_dssp -GGGTSCEEEEEECTTCCE-EEEEEEEC
T ss_pred -HHcCCceEEEEecCCCce-eEEEEEEe
Confidence 99 999999999999975 66766655
No 171
>4dkd_C Macrophage colony-stimulating factor 1 receptor; dimeric four-helix bundle cytokine, receptor tyrosine kinase glycosylation; HET: NAG BMA; 3.00A {Homo sapiens}
Probab=99.34 E-value=1.1e-11 Score=71.27 Aligned_cols=103 Identities=19% Similarity=0.283 Sum_probs=70.5
Q ss_pred eeEEecC----CCeeEEcCcceeeecCCcEEEEEEEeccCCC-eEEEEECCeeccCCCCceEEEeCC-CCCeEEEEccCC
Q psy2442 3 RKVRFLD----PPEITLRPRNQAVKAGGITSFYCIARGDPIP-VIQWRKNGKRVSGTQSRYMVQEFP-PGGSLLRIEPVR 76 (111)
Q Consensus 3 ~~l~v~~----~p~~~~~~~~~~~~~g~~~~l~c~~~~~~~~-~~~w~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~ 76 (111)
..|.|.. +|.+...+....+..|+.+.|.|.+.+.+.+ .+.|++++..+... ......... .....|.|.++.
T Consensus 175 ~~l~V~~~~~~~p~i~~~~~~~~~~~g~~v~l~C~~~~~~~~~~~~w~~~~~~~~~~-~~~~~~~~~~~~~~~L~i~~v~ 253 (292)
T 4dkd_C 175 IRLKVQKVIPGPPALTLVPAELVRIRGEAAQIVCSASSVDVNFDVFLQHNNTKLAIP-QQSDFHNNRYQKVLTLNLDQVD 253 (292)
T ss_dssp EEEEEECCCCSSCEEEEESSCBCCCSSSCEEEEEEEEESSSCCEEECCBSSCCCCCC-BEEEEETTEEEEEEEEEESSCC
T ss_pred EEEEEeCCCCCCCeEEccCCceeEecCCCEEEEEEecCCCCceEEEEeCCCcccccC-ccceeccceeeeEEEEEECccC
Confidence 4567765 7888777777677899999999999886654 67788887765422 111111000 012358999999
Q ss_pred CCCCCeEEEEEeeeCCCceEeeEEEEEEecCC
Q psy2442 77 HARDDAVYECVAENGVGDAVSAEASLTVYEGE 108 (111)
Q Consensus 77 ~~~d~g~y~c~~~~~~~~~~~~~~~l~~~~~~ 108 (111)
. .|.|.|.|.+.|..|.. ...+.|.|.+..
T Consensus 254 ~-~d~G~Y~C~a~N~~g~~-~~~~~l~V~~~~ 283 (292)
T 4dkd_C 254 F-QHAGNYSCVASNVQGKH-STSMFFRVVESA 283 (292)
T ss_dssp T-TSCEEEEEEEECSSCEE-EEEEEECC----
T ss_pred h-hcCeEEEEEEecCCCCc-eeEEEEEEeeCC
Confidence 8 99999999999999874 777777766543
No 172
>4f80_A Butyrophilin subfamily 3 member A1; B7 superfamily, CD277, immune system; 1.94A {Homo sapiens} PDB: 4f9l_A* 4f9p_A 4f8t_A 4f8q_A
Probab=99.33 E-value=7.1e-12 Score=69.86 Aligned_cols=86 Identities=17% Similarity=0.171 Sum_probs=52.7
Q ss_pred ceeeecCCcEEEEEEEec-cCCCeEEEEECCeeccCCCCceEEEeCCCCCeEEEEccCCCCCCCeEEEEEeeeCCCceEe
Q psy2442 19 NQAVKAGGITSFYCIARG-DPIPVIQWRKNGKRVSGTQSRYMVQEFPPGGSLLRIEPVRHARDDAVYECVAENGVGDAVS 97 (111)
Q Consensus 19 ~~~~~~g~~~~l~c~~~~-~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~g~y~c~~~~~~~~~~~ 97 (111)
...+..|+.+.+.|.+.+ .|.|.+.|++++...............++....+.+..+.. .|.|.|.|.+.|..|.. .
T Consensus 127 ~~~~~~g~~v~l~c~~~g~~P~p~i~W~k~~~~~~~~~~~~~~~~~~g~~~v~s~l~v~~-~d~G~YtC~a~N~~g~~-~ 204 (226)
T 4f80_A 127 DVKGYKDGGIHLECRSTGWYPQPQIQWSNNKGENIPTVEAPVVADGVGLYAVAASVIMRG-SSGEGVSCTIRSSLLGL-E 204 (226)
T ss_dssp EEEEEETTEEEEEEEEEEEBSCCEEEEECTTSCBCCCEECCCEECTTSCEEEEEEEEECC-----CEEEEEEETTTTE-E
T ss_pred eeeeccCCceeeEEEeccCCCCCEEEEEECCceEcCCCceEEEECCCCcEEEEEEEEech-hcCcEEEEEEEeCCCCe-E
Confidence 346778999999999887 58889999986544322211111221111112234445666 89999999999999874 6
Q ss_pred eEEEEEEec
Q psy2442 98 AEASLTVYE 106 (111)
Q Consensus 98 ~~~~l~~~~ 106 (111)
....|.+.+
T Consensus 205 ~~~~v~v~e 213 (226)
T 4f80_A 205 KTASISIAD 213 (226)
T ss_dssp EEEEECCCT
T ss_pred EEEEEEECC
Confidence 777776654
No 173
>2y23_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin- like; 2.50A {Homo sapiens}
Probab=99.33 E-value=1.5e-11 Score=71.23 Aligned_cols=78 Identities=18% Similarity=0.274 Sum_probs=61.0
Q ss_pred eeeecCCcEEEEEEEeccCCC-eEEEEECCeeccCCCCceEEEeCCCCCeEEEEccCCCCCCCeEEEEEeeeCCCceEee
Q psy2442 20 QAVKAGGITSFYCIARGDPIP-VIQWRKNGKRVSGTQSRYMVQEFPPGGSLLRIEPVRHARDDAVYECVAENGVGDAVSA 98 (111)
Q Consensus 20 ~~~~~g~~~~l~c~~~~~~~~-~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~g~y~c~~~~~~~~~~~~ 98 (111)
..+..|+.+.|.|.+.+.|.+ .+.|++++..+... .++.... ....|.|.++.. .|.|.|.|.+.|..|.. ..
T Consensus 231 ~~v~~G~~~~l~C~~~~~p~~~~v~W~~~g~~~~~~-~~~~~~~---~~~~L~I~~v~~-~d~G~Y~C~a~N~~G~~-~~ 304 (312)
T 2y23_A 231 WEVTGECNVLLKCKVANIKKETHIVWYKDEREISVD-EKHDFKD---GICTLLITEFSK-KDAGIYEVILKDDRGKD-KS 304 (312)
T ss_dssp EEEETTTEEEEEEEEESCCSSCEEEEEETTEEEEEE-CCC-------CEEEEEECSCSG-GGCEEEEEEEESTTCCE-EE
T ss_pred EEEeCCCEEEEEEEEcCCCCCCEEEEeeCCEECCCC-CcEEEEC---CEEEEEECcCCH-HHCEEEEEEEEcCCCce-ee
Confidence 577899999999999999888 99999999887632 3333322 335699999998 99999999999999874 66
Q ss_pred EEEEE
Q psy2442 99 EASLT 103 (111)
Q Consensus 99 ~~~l~ 103 (111)
.+.|.
T Consensus 305 ~~~l~ 309 (312)
T 2y23_A 305 RLKLV 309 (312)
T ss_dssp EEEEC
T ss_pred eeEEE
Confidence 66554
No 174
>1gsm_A Madcam-1, mucosal addressin cell adhesion molecule-1; cell adhesion protein, immunoglobulin fold, I-SET fold, cell adhesion glycoprotein; 1.9A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1bqs_A*
Probab=99.33 E-value=5.9e-11 Score=65.84 Aligned_cols=80 Identities=20% Similarity=0.263 Sum_probs=62.3
Q ss_pred eeeecCCcEEEEEEEeccCCC--eEEEEECCeeccCCCCceEEEeCCCCCeEEEEccCCCCCCCeEEEEEeeeCCCceEe
Q psy2442 20 QAVKAGGITSFYCIARGDPIP--VIQWRKNGKRVSGTQSRYMVQEFPPGGSLLRIEPVRHARDDAVYECVAENGVGDAVS 97 (111)
Q Consensus 20 ~~~~~g~~~~l~c~~~~~~~~--~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~g~y~c~~~~~~~~~~~ 97 (111)
+.+..|+++.|.|.+ +.+.| .+.|.+.+..+ .+..... ....|.|.+++. .|.|.|.|.+.|..+. ..
T Consensus 17 v~v~~G~sv~L~C~a-~~p~P~~~i~W~~~~~~l----~~~~~~~---~~~~L~I~~v~~-~d~G~Y~C~a~n~~~~-~~ 86 (210)
T 1gsm_A 17 VAVALGASRQLTCRL-ACADRGASVQWRGLDTSL----GAVQSDT---GRSVLTVRNASL-SAAGTRVCVGSCGGRT-FQ 86 (210)
T ss_dssp EEEETTCCEEEEEEE-CCSSTTCEEEEESSTTTT----CCEEEES---SEEEEEECSCCG-GGCEEEEEEEEETTEE-EE
T ss_pred eEEeCCCCEEEEEEC-CCCCCCcceEEeeccccc----CcEEecC---CccEEEECccCc-ccCceEEEEEEeCCCc-eE
Confidence 588899999999999 87777 99999854433 2222221 456699999998 9999999999998765 36
Q ss_pred eEEEEEEecCCC
Q psy2442 98 AEASLTVYEGEE 109 (111)
Q Consensus 98 ~~~~l~~~~~~~ 109 (111)
..+.|.|..+|.
T Consensus 87 ~~~~ltV~~~P~ 98 (210)
T 1gsm_A 87 HTVQLLVYAFPN 98 (210)
T ss_dssp EEEEEEEEBCCS
T ss_pred EEEEEEEEecCC
Confidence 788888888775
No 175
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.32 E-value=1.1e-11 Score=75.98 Aligned_cols=83 Identities=30% Similarity=0.501 Sum_probs=63.3
Q ss_pred CcceeeecCCcEEEEEEEeccCCCeEEEEECCeeccC--CCCceEEEeCCCCCeEEEEccCCCCCCCeEEEEEeeeCCCc
Q psy2442 17 PRNQAVKAGGITSFYCIARGDPIPVIQWRKNGKRVSG--TQSRYMVQEFPPGGSLLRIEPVRHARDDAVYECVAENGVGD 94 (111)
Q Consensus 17 ~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~d~g~y~c~~~~~~~~ 94 (111)
+....+..|+++.+.|.+.|.|.|.+.|++++..+.. ...++... ....+.+..+.. .|+|.|.|.+.|..|.
T Consensus 392 ~~~~~v~~G~~v~l~C~~~g~P~p~i~W~~~~~~~~~~~~~~~~~~~----~~~~L~i~~v~~-~d~G~Y~C~a~N~~g~ 466 (477)
T 2id5_A 392 AQQVFVDEGHTVQFVCRADGDPPPAILWLSPRKHLVSAKSNGRLTVF----PDGTLEVRYAQV-QDNGTYLCIAANAGGN 466 (477)
T ss_dssp CEEEEEETTCCEEECCCEEEESCCEEEEECTTSCBC-------CEEC----TTSCEEESSCCS-TTCEEEEEEEEETTEE
T ss_pred cccEEEeCCCeEEEEEeccccCCCEEEEEECCccccccCCCceEEeC----CCCEEEEeeCCh-HHCEEEEEEEEeCCCc
Confidence 3556788999999999999999999999998877642 12333332 223499999998 9999999999999887
Q ss_pred eEeeEEEEEEe
Q psy2442 95 AVSAEASLTVY 105 (111)
Q Consensus 95 ~~~~~~~l~~~ 105 (111)
. ...+.+.|.
T Consensus 467 ~-~~~~~l~V~ 476 (477)
T 2id5_A 467 D-SMPAHLHVR 476 (477)
T ss_dssp E-EEEEEEEEE
T ss_pred E-EEEEEEEEe
Confidence 4 777777664
No 176
>3d9a_L Light chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_L 1xgp_A 1xgq_A 1xgr_A 1xgt_A 1dqq_A 1dqm_L 1dqj_A 1nby_A 1nbz_A 1ndg_A 1ndm_A 1xgu_A 1fh5_L 1bm3_L 1opg_L 1mlb_A 1mlc_A 1rih_L 1p2c_A ...
Probab=99.32 E-value=5.8e-11 Score=65.47 Aligned_cols=92 Identities=22% Similarity=0.282 Sum_probs=61.8
Q ss_pred eEEcCcceeeecCCcEEEEEEEeccCCCeEEEEECC--eec-----------cCCCCceEEEeCCCCCeEEEEccCCCCC
Q psy2442 13 ITLRPRNQAVKAGGITSFYCIARGDPIPVIQWRKNG--KRV-----------SGTQSRYMVQEFPPGGSLLRIEPVRHAR 79 (111)
Q Consensus 13 ~~~~~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~~--~~~-----------~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 79 (111)
+.+.+..+.+..|+.+.|.|.+.+.+.+.+.|++.+ ..+ .....++...... ....|.|.++.. .
T Consensus 4 v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~-~~~~L~I~~v~~-~ 81 (213)
T 3d9a_L 4 LTQSPATLSVTPGNSVSLSCRASQSIGNNLHWYQQKSHESPRLLIKYASQSISGIPSRFSGSGSG-TDFTLSINSVET-E 81 (213)
T ss_dssp EEEECSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEET-TEEEEEESSCCG-G
T ss_pred EEeCCccEEEeCCCcEEEEEECCCCCCCCEEEEEeCCCCCcEEEEEEcccccccccccEEEEcCC-CEEEEEECCCCh-h
Confidence 344566678899999999999999888899999743 111 0111355444311 334699999998 9
Q ss_pred CCeEEEEEeeeCCCceEeeEEEEEEec
Q psy2442 80 DDAVYECVAENGVGDAVSAEASLTVYE 106 (111)
Q Consensus 80 d~g~y~c~~~~~~~~~~~~~~~l~~~~ 106 (111)
|.|.|.|.+.|..+........+.+..
T Consensus 82 D~G~Y~C~~~~~~~~~~~~~~~l~V~~ 108 (213)
T 3d9a_L 82 DFGMYFCQQSNSWPYTFGGGTKLEIKR 108 (213)
T ss_dssp GCEEEEEEECSSSSCEECCCEEEEECC
T ss_pred hCEEEEEeeecCCcceeCCCEEEEEec
Confidence 999999999987654222233455543
No 177
>3sob_L Antibody light chain; beta propeller, protein binding-immune system complex; 1.90A {Homo sapiens} PDB: 1pkq_A 3u1s_L*
Probab=99.32 E-value=1.5e-10 Score=64.71 Aligned_cols=93 Identities=19% Similarity=0.275 Sum_probs=62.2
Q ss_pred CeeEEcCcceeeecCCcEEEEEEEeccCCCeEEEEECC--e-----------eccCCCCceEEEeCCCCCeEEEEccCCC
Q psy2442 11 PEITLRPRNQAVKAGGITSFYCIARGDPIPVIQWRKNG--K-----------RVSGTQSRYMVQEFPPGGSLLRIEPVRH 77 (111)
Q Consensus 11 p~~~~~~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~~--~-----------~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 77 (111)
+.+...+..+.+..|+++.|.|...+.+.+.+.|++.. . .......++...... ....|.|.+++.
T Consensus 25 ~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~-~~~~L~I~~v~~ 103 (237)
T 3sob_L 25 IQMTQSPSSLSASVGDRVTITCRASQDVSTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSGSG-TDFTLTISSLQP 103 (237)
T ss_dssp CCEEEECSEEEEETTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEET-TEEEEEESSCCG
T ss_pred ceEEeCCCeEEEeCCCcEEEEEecCCCCCceEEEEEECCCCCCEEEEEeccccCCCCCCcEEEEcCC-CEEEEEECCCCh
Confidence 34555566778999999999999988888899999832 1 111112455444211 345599999998
Q ss_pred CCCCeEEEEEeeeCCCceEeeEEEEEEe
Q psy2442 78 ARDDAVYECVAENGVGDAVSAEASLTVY 105 (111)
Q Consensus 78 ~~d~g~y~c~~~~~~~~~~~~~~~l~~~ 105 (111)
.|+|.|.|.+.+..+........+.|.
T Consensus 104 -~D~G~Y~C~~~~~~~~~~~~~~~l~V~ 130 (237)
T 3sob_L 104 -EDFATYYCQQSYTTPPTFGQGTKVEIK 130 (237)
T ss_dssp -GGCEEEEEEECSSSSCEECCCEEEEEE
T ss_pred -hhCeEEEEeeccCCceEEcCcEEEEEe
Confidence 999999999987654222233344443
No 178
>3grw_A Fibroblast growth factor receptor 3; FGFR3, protein-protein complex, receptor tyrosine kinas binding, immunoglobulin domain, kinase, membrane, nucleotid binding; HET: NAG; 2.10A {Homo sapiens}
Probab=99.32 E-value=1.9e-11 Score=68.54 Aligned_cols=84 Identities=33% Similarity=0.533 Sum_probs=63.6
Q ss_pred cceeeecCCcEEEEEEEeccCCCeEEEEECCeeccCCCC--ceEEEeCCCCCeEEEEccCCCCCCCeEEEEEeeeCCCce
Q psy2442 18 RNQAVKAGGITSFYCIARGDPIPVIQWRKNGKRVSGTQS--RYMVQEFPPGGSLLRIEPVRHARDDAVYECVAENGVGDA 95 (111)
Q Consensus 18 ~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~~~~~d~g~y~c~~~~~~~~~ 95 (111)
..+.+..|+.+.|.|.+.+.+.+.+.|++++..+..... ...... ....|.|.++.. .|.|.|.|.+.|..+..
T Consensus 23 ~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~---~~~~L~i~~v~~-~d~G~Y~C~~~~~~~~~ 98 (241)
T 3grw_A 23 KLLAVPAANTVRFRCPAAGNPTPSISWLKNGREFRGEHRIGGIKLRH---QQWSLVMESVVP-SDRGNYTCVVENKFGSI 98 (241)
T ss_dssp CEEEEETTSEEEEECCEECSSCCEEEEEETTEECCGGGSTTCCEEEG---GGTEEEECSCCG-GGCEEEEEEEEETTEEE
T ss_pred cceEEcCCCeEEEEEEecCCCCceeEEEECCcccCCCCcccceeeec---cceEEEEEeCCc-ccCEEEEEEEeecCCce
Confidence 346788999999999999988889999999988753211 112221 334589999998 99999999999987753
Q ss_pred EeeEEEEEEec
Q psy2442 96 VSAEASLTVYE 106 (111)
Q Consensus 96 ~~~~~~l~~~~ 106 (111)
...+.+.+..
T Consensus 99 -~~~~~l~V~~ 108 (241)
T 3grw_A 99 -RQTYTLDVLE 108 (241)
T ss_dssp -EEEEEEEEEC
T ss_pred -EEEEEEEEec
Confidence 5666666654
No 179
>1mqk_L Antibody 7E2 FV fragment, light chain; membrane protein, cytochrome C oxidase, high- resolution structure, immune system; 1.28A {Mus musculus} SCOP: b.1.1.1 PDB: 1ar1_D 3ehb_D* 3hb3_D* 1qle_L* 1f6l_L 3iy2_A 1vfa_A 1dvf_A 1kir_A 1g7i_A 1g7j_A 1a2y_A 1kip_A 1kiq_A 1vfb_A 1g7h_A 1a7o_L 1g7l_A 1g7m_A 1a7n_L ...
Probab=99.32 E-value=3.4e-11 Score=61.29 Aligned_cols=77 Identities=21% Similarity=0.313 Sum_probs=55.1
Q ss_pred eEEcCcceeeecCCcEEEEEEEeccCCCeEEEEECC--eec----c-------CCCCceEEEeCCCCCeEEEEccCCCCC
Q psy2442 13 ITLRPRNQAVKAGGITSFYCIARGDPIPVIQWRKNG--KRV----S-------GTQSRYMVQEFPPGGSLLRIEPVRHAR 79 (111)
Q Consensus 13 ~~~~~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~~--~~~----~-------~~~~~~~~~~~~~~~~~l~~~~~~~~~ 79 (111)
+.+.+..+.+..|++++|.|...+.+.+.+.|++.. ..+ . ....|+...... ....|.|.+++. +
T Consensus 4 v~q~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~g~~~~~li~~~~~~~~~~~~R~~~~~~~-~~~~L~I~~v~~-~ 81 (120)
T 1mqk_L 4 LTQTPVSLSASVGETVTITCRASENIYSYLAWYQQKQGKSPQFLVYNAKTLGEGVPSRFSGSGSG-TQFSLKINSLLP-E 81 (120)
T ss_dssp EEEECSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEET-TEEEEEESSCCG-G
T ss_pred eEecCCeEEEcCCCcEEEEEEeCCCCCceEEEEEECCCCCCEEEEEeCCcCCCCCCceEEEeccC-CEEEEEECCCCH-H
Confidence 345566678899999999999988777789999843 211 0 112455543211 334599999998 9
Q ss_pred CCeEEEEEeeeC
Q psy2442 80 DDAVYECVAENG 91 (111)
Q Consensus 80 d~g~y~c~~~~~ 91 (111)
|+|.|.|.+.+.
T Consensus 82 DsG~Y~C~~~~~ 93 (120)
T 1mqk_L 82 DFGSYYCQHHYG 93 (120)
T ss_dssp GCEEEEEEECSS
T ss_pred HCEEEEEEEEeC
Confidence 999999999874
No 180
>1uct_A Immunoglobulin alpha FC receptor; beta stands, immune system; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1ovz_A* 1ow0_C*
Probab=99.32 E-value=1.1e-11 Score=69.15 Aligned_cols=94 Identities=15% Similarity=0.089 Sum_probs=63.0
Q ss_pred ecCCCeeEEcCcceeeecCCcEEEEEEEeccCCCeEEEEECCeeccCCCCceEEEeCCCCCe--EEEEccCCCCCCCeEE
Q psy2442 7 FLDPPEITLRPRNQAVKAGGITSFYCIARGDPIPVIQWRKNGKRVSGTQSRYMVQEFPPGGS--LLRIEPVRHARDDAVY 84 (111)
Q Consensus 7 v~~~p~~~~~~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~--~l~~~~~~~~~d~g~y 84 (111)
+..+|.+...+. ..+..|++++|.|.+.+ +.+.+.|+++|..+........... ... .|.|.++.. .|+|.|
T Consensus 6 ~~~~P~i~~~p~-~~v~~G~~vtL~C~~~~-~~~~~~W~k~g~~~~~~~~~~~~~~---~~~~~~L~I~~v~~-~D~G~Y 79 (218)
T 1uct_A 6 DFPMPFISAKSS-PVIPLDGSVKIQCQAIR-EAYLTQLMIIKNSTYREIGRRLKFW---NETDPEFVIDHMDA-NKAGRY 79 (218)
T ss_dssp GSCCCCEEESSC-SEEETTCCEEEEECCCT-TCSEEEEEEEETTEEEECSEECC-------CCCEEEECSCCG-GGCEEE
T ss_pred CCCCCEEEecCC-CccCCCCCEEEEEEcCC-CCCEEEEEECCCcccccccccCCCC---cceeeEEEEccccc-ccCEEE
Confidence 345677776666 47889999999999877 5678999998765432111100000 223 699999998 999999
Q ss_pred EEEeeeCCCce-EeeEEEEEEec
Q psy2442 85 ECVAENGVGDA-VSAEASLTVYE 106 (111)
Q Consensus 85 ~c~~~~~~~~~-~~~~~~l~~~~ 106 (111)
.|.+.|..+.. .+..+.|.|.+
T Consensus 80 ~C~a~n~~~~~~~s~~~~l~V~~ 102 (218)
T 1uct_A 80 QCQYRIGHYRFRYSDTLELVVTG 102 (218)
T ss_dssp EEEEEETTTEEEECCCEEEEEEC
T ss_pred EEEEEcCCCceeecCCEEEEEcC
Confidence 99999976521 23445666654
No 181
>3oq3_B IFN-alpha/beta binding protein C12R; mousepox virus, moscow strain, cytokine decoy RE virus/viral protein, type-1 interferon, soluble A/B-IFNR; HET: EPE; 2.10A {Ectromelia virus}
Probab=99.31 E-value=4.1e-11 Score=70.21 Aligned_cols=96 Identities=21% Similarity=0.240 Sum_probs=66.9
Q ss_pred ecCCCeeEEcCcceeeecCCcEEEEEEEeccC-CCeEEEEECCeeccCCCCceEEEeCCCCCeEEEEccCCCCCCCeEEE
Q psy2442 7 FLDPPEITLRPRNQAVKAGGITSFYCIARGDP-IPVIQWRKNGKRVSGTQSRYMVQEFPPGGSLLRIEPVRHARDDAVYE 85 (111)
Q Consensus 7 v~~~p~~~~~~~~~~~~~g~~~~l~c~~~~~~-~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~g~y~ 85 (111)
+..+|.+........+..|+.+.|.|.+.+.| .+.+.|++++..+.....++... ...|.|.++.. .|.|.|.
T Consensus 125 ~~~~p~~~~~~~~~~~~~G~~v~L~C~~~g~p~~~~i~W~k~~~~l~~~~~~~~~~-----~~~L~I~~v~~-~D~G~Y~ 198 (329)
T 3oq3_B 125 IRKPPSCIPETYELGTHDKYGIDLYCGILYAKHYNNITWYKNNQELIIDGTKYSQS-----GQNLIIHNPEL-EDSGRYD 198 (329)
T ss_dssp ECCCCSCEEEEEETTSSTTTCEEEECCCCSCCCCCEEEEEETTEECCCSSSSEEEE-----TTEEEECSCCG-GGCEEEE
T ss_pred EcCCCcEeccccceEEeCCCcEEEEeccCCCCCCceEEEEECCccCCCCCceEecC-----CCEEEEeecCh-hhCEEEE
Confidence 33444443333334466799999999999988 88999999999885443454433 24489999998 9999999
Q ss_pred EEeeeC--CCce---EeeEEEEEEecCC
Q psy2442 86 CVAENG--VGDA---VSAEASLTVYEGE 108 (111)
Q Consensus 86 c~~~~~--~~~~---~~~~~~l~~~~~~ 108 (111)
|.+.|. .|.. ....+.+.|..++
T Consensus 199 C~a~n~~~~g~~~~~~s~~~~l~V~~~~ 226 (329)
T 3oq3_B 199 CYVHYDDVRIKNDIVVSRCKILTVIPSQ 226 (329)
T ss_dssp EEEEECCTTSSSCEEEEEEEEEEEECCC
T ss_pred EEEEecccCCCceeEEEeeEEEEEECCC
Confidence 999986 5432 1223556666554
No 182
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.31 E-value=5.6e-12 Score=76.84 Aligned_cols=93 Identities=26% Similarity=0.439 Sum_probs=65.4
Q ss_pred CCeeEEcCcceeeecCCcEEEEEEEeccCCCeEEEEECCeec-cCC--CCceEEEeCCCCCeEEEEccCCCCCCCeEEEE
Q psy2442 10 PPEITLRPRNQAVKAGGITSFYCIARGDPIPVIQWRKNGKRV-SGT--QSRYMVQEFPPGGSLLRIEPVRHARDDAVYEC 86 (111)
Q Consensus 10 ~p~~~~~~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~~~~~-~~~--~~~~~~~~~~~~~~~l~~~~~~~~~d~g~y~c 86 (111)
+|.+...+....+..|+.+++.|.+. |.|.+.|++.+... ... ..++... ....|.+.+++. .|+|.|.|
T Consensus 352 ~P~i~~~~~~~~v~~G~~~~l~C~~~--p~p~i~W~~~~~~~~~~~~~~~~~~~~----~~g~L~i~~v~~-~D~G~Y~C 424 (452)
T 3zyi_A 352 APFIMDAPRDLNISEGRMAELKCRTP--PMSSVKWLLPNGTVLSHASRHPRISVL----NDGTLNFSHVLL-SDTGVYTC 424 (452)
T ss_dssp CCCCSBCCCCEECCTTSCCEECCBCC--TTSEEEEECTTSCEECSSCCCSSCEEC----TTSCEECSSCCT-TCCEEEEE
T ss_pred CcccccccccccccCCCEEEEEEeCC--CCCcEEEEeCCCcEeccCCCCCCEEEC----CCCeEEEeecCH-HHCEEEEE
Confidence 45555566667888999999999987 88899999854433 211 1243332 223499999998 99999999
Q ss_pred EeeeCCCceEeeEEEEEEecCCCC
Q psy2442 87 VAENGVGDAVSAEASLTVYEGEEK 110 (111)
Q Consensus 87 ~~~~~~~~~~~~~~~l~~~~~~~~ 110 (111)
.+.|..|.. ...+.+.|.+.+.+
T Consensus 425 ~a~N~~G~~-~~~~~l~v~~~~~~ 447 (452)
T 3zyi_A 425 MVTNVAGNS-NASAYLNVSTAGTH 447 (452)
T ss_dssp EEECSSCEE-EEEEEEEC------
T ss_pred EEEcCCCcE-EEEEEEEEEccccc
Confidence 999999975 77888887766543
No 183
>3uzq_A Anti-dengue MAB 4E11; dengue antibody neutralization, immune system; HET: MES; 1.60A {Mus musculus} PDB: 3uze_A* 3uyp_A* 3uzv_B 1dzb_A
Probab=99.31 E-value=5e-11 Score=67.54 Aligned_cols=96 Identities=23% Similarity=0.307 Sum_probs=63.5
Q ss_pred CCeeEEcCcceeeecCCcEEEEEEEeccCCC----eEEEEEC--Ceecc-----------CCCCceEEEeCCCCCeEEEE
Q psy2442 10 PPEITLRPRNQAVKAGGITSFYCIARGDPIP----VIQWRKN--GKRVS-----------GTQSRYMVQEFPPGGSLLRI 72 (111)
Q Consensus 10 ~p~~~~~~~~~~~~~g~~~~l~c~~~~~~~~----~~~w~~~--~~~~~-----------~~~~~~~~~~~~~~~~~l~~ 72 (111)
++.+...+....+..|++++|.|.+.+.+.+ .+.|++. +..+. ....++...... ....|.|
T Consensus 133 ~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~-~~~~L~I 211 (253)
T 3uzq_A 133 ELVMTQTPASLAVSLGQRATISCRASENVDRYGNSFMHWYQQKAGQPPKLLIYRASNLESGIPARFSGSGSR-TDFTLTI 211 (253)
T ss_dssp -CCEEEECSEEEECTTSCEEEEEEESSCCEETTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEET-TEEEEEE
T ss_pred cceEECcCCeEEEeCCCCEEEEEEecCccccCCCcEEEEEEECCCCCCEEEEEEccccCCccCCceEEeCCC-CEEEEEE
Confidence 4566666777788999999999999887766 8999984 22111 011344332211 3345999
Q ss_pred ccCCCCCCCeEEEEEeeeCCCceEeeEEEEEEecC
Q psy2442 73 EPVRHARDDAVYECVAENGVGDAVSAEASLTVYEG 107 (111)
Q Consensus 73 ~~~~~~~d~g~y~c~~~~~~~~~~~~~~~l~~~~~ 107 (111)
.++.. .|+|.|.|.+.|..+........|.|...
T Consensus 212 ~~v~~-~DsG~Y~C~~~n~~~~~fg~gt~l~v~~~ 245 (253)
T 3uzq_A 212 NPVEA-DDVATYFCQRSNEVPWTFGGGTKLEIKRP 245 (253)
T ss_dssp SSCCG-GGCEEEEEEECSSSSCCBCCCEEEEECCC
T ss_pred CCCCH-HHCEEEEEEEccCCCcEECCCEEEEEcCC
Confidence 99998 99999999998855432233455666543
No 184
>3p3y_A Neurofascin; IG domains, cell adhesion; HET: NAG; 2.60A {Homo sapiens} PDB: 3p40_A*
Probab=99.31 E-value=1.6e-11 Score=73.34 Aligned_cols=100 Identities=24% Similarity=0.436 Sum_probs=69.9
Q ss_pred EecCCCeeEE-cCcceeeecCCcEEEEEEEeccCCCeEEEEECCeeccCC-CCceEEEeCCCCCeEEEEc----cCCCCC
Q psy2442 6 RFLDPPEITL-RPRNQAVKAGGITSFYCIARGDPIPVIQWRKNGKRVSGT-QSRYMVQEFPPGGSLLRIE----PVRHAR 79 (111)
Q Consensus 6 ~v~~~p~~~~-~~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~----~~~~~~ 79 (111)
.+..+|.+.. .+....+..|+.+.|.|.+.+.|.+.+.|++++..+... ..++.... ....+.+. ++.. .
T Consensus 12 ~~~~~P~i~~~~~~~~~v~~G~~v~l~C~~~g~p~~~v~W~k~g~~l~~~~~~~~~~~~---~~~~l~i~~~~~~~~~-~ 87 (404)
T 3p3y_A 12 ELTQPPTITKQSAKDHIVDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRR---RSGTLVIDFRSGGRPE-E 87 (404)
T ss_dssp -CCCCCCEEEECCTTCEECSSSCCCCCEEECCSSCCEEEEEETTEECCGGGCSSCBCCS---SSCCCBCCCTTTCCTT-S
T ss_pred hccCCCcccccCCccEEEcCCCCEEEEEEecCCCCCeEEEEECCEEeeeecCCcceEec---CCceEEEEeccCCCCc-c
Confidence 4567787764 456678889999999999999999999999999876422 12222211 12223332 6666 8
Q ss_pred CCeEEEEEeeeCCCceEeeEEEEEEecCCC
Q psy2442 80 DDAVYECVAENGVGDAVSAEASLTVYEGEE 109 (111)
Q Consensus 80 d~g~y~c~~~~~~~~~~~~~~~l~~~~~~~ 109 (111)
|.|.|.|.+.|..|...+..+.+.+...|.
T Consensus 88 D~G~Y~C~a~n~~g~~~s~~~~l~V~~~p~ 117 (404)
T 3p3y_A 88 YEGEYQCFARNKFGTALSNRIRLQVSKSPL 117 (404)
T ss_dssp SCEEEEEEEECSSCEEEEEEEEEEECCCCC
T ss_pred CCEEEEEEEEcCCCeEeeeeEEEEEeccCc
Confidence 999999999998876544667777766553
No 185
>1ry7_B FGFR-3, fibroblast growth factor receptor 3; FGF-FGFR complex, beta trefoil, IG domain, growth factor/growth factor receptor complex; 3.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.31 E-value=2.7e-11 Score=70.86 Aligned_cols=91 Identities=31% Similarity=0.437 Sum_probs=65.5
Q ss_pred cceeeecCCcEEEEEEEeccCCCeEEEEE----CCeeccCCCC-ceEEEeC------CCCCeEEEEccCCCCCCCeEEEE
Q psy2442 18 RNQAVKAGGITSFYCIARGDPIPVIQWRK----NGKRVSGTQS-RYMVQEF------PPGGSLLRIEPVRHARDDAVYEC 86 (111)
Q Consensus 18 ~~~~~~~g~~~~l~c~~~~~~~~~~~w~~----~~~~~~~~~~-~~~~~~~------~~~~~~l~~~~~~~~~d~g~y~c 86 (111)
....+..|+.+.|.|.+.+.|.+.+.|++ ++..+..... .+..... +.....|.|.++.. .|.|.|.|
T Consensus 230 ~~~~~~~G~~v~l~C~~~g~p~p~v~W~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~-~d~G~Y~C 308 (334)
T 1ry7_B 230 ANQTAVLGSDVEFHCKVYSDAQPHIQWLKHVEVNGSKVGPDGTPYVTVLKTAGANTTDKELEVLSLHNVTF-EDAGEYTC 308 (334)
T ss_dssp CCEEEESSCCEEECCCCBCSSCEEEEEEECCCGGGCSBCTTSSBCCCCCCCSSCSCSCTTCCCEEECSCCT-TSCSEEEE
T ss_pred CceEEeCCCCEEEEEEEecCCCCeEEEEECCcCCCccccCCCCeeEEEeecCccccccccccEEEEccCCH-HHCEEEEE
Confidence 45678889999999999999999999999 5555432211 1111100 00113599999998 99999999
Q ss_pred EeeeCCCceEeeEEEEEEecCCCC
Q psy2442 87 VAENGVGDAVSAEASLTVYEGEEK 110 (111)
Q Consensus 87 ~~~~~~~~~~~~~~~l~~~~~~~~ 110 (111)
.+.|..|.. ...+.|.|...+.+
T Consensus 309 ~a~N~~G~~-~~~~~l~V~~~~~~ 331 (334)
T 1ry7_B 309 LAGNSIGFS-HHSAWLVVLPAEEE 331 (334)
T ss_dssp EEEESSCCE-EEEEEEEEECSCCC
T ss_pred EEeCCCCeE-EEEEEEEEEECCCC
Confidence 999999985 77888888766543
No 186
>3q0h_A T cell immunoreceptor with IG and ITIM domains; immune receptor, adhesion, structural genomics, NEW YORK STR genomics research consortium, nysgrc; 1.70A {Homo sapiens} PDB: 3rq3_A 3udw_A* 3ucr_A
Probab=99.30 E-value=5.4e-11 Score=60.32 Aligned_cols=89 Identities=17% Similarity=0.289 Sum_probs=60.7
Q ss_pred cCcceeeecCCcEEEEEEEecc--CCCeEEEEECCeeccC------------CCCceEEEeCCCCCeEEEEccCCCCCCC
Q psy2442 16 RPRNQAVKAGGITSFYCIARGD--PIPVIQWRKNGKRVSG------------TQSRYMVQEFPPGGSLLRIEPVRHARDD 81 (111)
Q Consensus 16 ~~~~~~~~~g~~~~l~c~~~~~--~~~~~~w~~~~~~~~~------------~~~~~~~~~~~~~~~~l~~~~~~~~~d~ 81 (111)
.+..+.+..|++++|.|...+. ....+.|++.+..+.. -..|+.+. ....|.|.+++. .|+
T Consensus 9 ~~~~v~~~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~i~~~~~~~~~~~~~~~~~R~~~~----~~~sL~I~~v~~-~D~ 83 (117)
T 3q0h_A 9 TTGNISAEKGGSIILQCHLSSTTAQVTQVNWEQQDQLLAICNADLGWHISPSFKDRVAPG----PGLGLTLQSLTV-NDT 83 (117)
T ss_dssp ESCCEEEETTCCEEECEEEESCCCEEEEEEEEETTEEEEEEETTTEEECCGGGTTTEEEC----STTCEEECSCCG-GGC
T ss_pred ccCCEEEecCCCEEEEEEecCCCCCEEEEEEEeCCEEEEEEECCCCceeCccccCcEEeC----CceEEEEeeCCh-hhC
Confidence 4555788999999999998763 2336899997643210 01344432 223499999998 999
Q ss_pred eEEEEEeee-CCCceEeeEEEEEEecCCCC
Q psy2442 82 AVYECVAEN-GVGDAVSAEASLTVYEGEEK 110 (111)
Q Consensus 82 g~y~c~~~~-~~~~~~~~~~~l~~~~~~~~ 110 (111)
|.|.|.+.+ ..|. ....+.|.|..+|.+
T Consensus 84 G~Y~C~v~~~~~g~-~~~~~~L~V~~pp~~ 112 (117)
T 3q0h_A 84 GEYFCIYHTYPDGT-YTGRIFLEVLESSVA 112 (117)
T ss_dssp EEEEEEEEEETTCC-EEEEEEEEEECC---
T ss_pred EEEEEEEEECCCCC-eEEEEEEEEEccCcc
Confidence 999999765 4555 477788888888754
No 187
>3oq3_B IFN-alpha/beta binding protein C12R; mousepox virus, moscow strain, cytokine decoy RE virus/viral protein, type-1 interferon, soluble A/B-IFNR; HET: EPE; 2.10A {Ectromelia virus}
Probab=99.30 E-value=1.5e-10 Score=67.84 Aligned_cols=99 Identities=14% Similarity=0.169 Sum_probs=69.3
Q ss_pred eeEEecCCC----eeEEcCcceeeecCCcEEEEEEEeccC---CC-eEEEEECCeeccCCCCceEEE---eCCCCCeEEE
Q psy2442 3 RKVRFLDPP----EITLRPRNQAVKAGGITSFYCIARGDP---IP-VIQWRKNGKRVSGTQSRYMVQ---EFPPGGSLLR 71 (111)
Q Consensus 3 ~~l~v~~~p----~~~~~~~~~~~~~g~~~~l~c~~~~~~---~~-~~~w~~~~~~~~~~~~~~~~~---~~~~~~~~l~ 71 (111)
+.|.|..++ .+. .+....+..|+.+.|.|.+.+.| .+ .+.|++++..+.....+.... ........|.
T Consensus 218 ~~l~V~~~~~~~~~~~-~~~~~~v~~G~~~~l~C~~~g~p~~~~~i~v~W~~~g~~i~~~~~~~~~~~~~~~~~~~~~L~ 296 (329)
T 3oq3_B 218 KILTVIPSQDHRFKLI-LDPKINVTIGEPANITCTAVSTSLLVDDVLIDWENPSGWIIGLDFGVYSILTSSGGITEATLY 296 (329)
T ss_dssp EEEEEECCCCCCEEEE-CCSEEEECTTSCEEEEEEEEETTCCTTCCEEEEECTTSCBCCBCSSEEEEEEEETTEEEEEEE
T ss_pred EEEEEECCCCCCCcee-cCCeeEEecCCCEEEEEEEEECCCCCCCcEEEEEECCeeeeccCCceeeeecccCceeEeEEE
Confidence 456777666 333 55557888999999999999987 67 889999988743222222111 1000234599
Q ss_pred EccCCCCCCCe-EEEEEeeeCCCceEeeEEEEEE
Q psy2442 72 IEPVRHARDDA-VYECVAENGVGDAVSAEASLTV 104 (111)
Q Consensus 72 ~~~~~~~~d~g-~y~c~~~~~~~~~~~~~~~l~~ 104 (111)
|.++.. .|.| .|.|.+.|..|.. ...+.|.+
T Consensus 297 I~~v~~-~D~G~~Y~C~a~N~~G~~-~~~~~l~v 328 (329)
T 3oq3_B 297 FENVTE-EYIGNTYTCRGHNYYFDK-TLTTTVVL 328 (329)
T ss_dssp ESSCCG-GGTTCEEEEEEECSSCEE-EEEEEEEE
T ss_pred EEeccH-HHCCCcEEEEEEecCCce-EEEEEEEe
Confidence 999998 9999 9999999999874 55665544
No 188
>3mj8_L Stimulatory hamster antibody HL4E10 FAB light CHA; hamster IGG, immune system; 2.94A {Cricetulus migratorius} PDB: 3mj9_L*
Probab=99.30 E-value=1.3e-10 Score=64.11 Aligned_cols=90 Identities=19% Similarity=0.282 Sum_probs=62.0
Q ss_pred eEEcCcceeeecCCcEEEEEEEeccCCCeEEEEEC--Ceecc-----------CCCCceEEEeCCCCCeEEEEccCCCCC
Q psy2442 13 ITLRPRNQAVKAGGITSFYCIARGDPIPVIQWRKN--GKRVS-----------GTQSRYMVQEFPPGGSLLRIEPVRHAR 79 (111)
Q Consensus 13 ~~~~~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~--~~~~~-----------~~~~~~~~~~~~~~~~~l~~~~~~~~~ 79 (111)
+..++ .+.+..|+.++|.|.+.+.+.+.+.|++. +.... ....++...... ....|.|.++.. .
T Consensus 4 v~~~~-~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~-~~~~L~I~~v~~-~ 80 (213)
T 3mj8_L 4 LTQPP-LVSVALGQKATITCSGDKLSDVYVHWYQQKAGQAPVLVIYEDNRRPSGIPDHFSGSNSG-NMATLTISKAQA-G 80 (213)
T ss_dssp BBCCS-EEEEETTSCEEEEEECSSTTTSCEEEEEECTTSCCEEEEBTTTBCCTTSCTTEEEEEET-TEEEEEESSCCG-G
T ss_pred EEeCC-cEEEeCCCCEEEEEEcCCCCCceEEEEEECCCCCcEEEEEECCccCCCccCcEEEEecC-CEEEEEECCCCh-h
Confidence 33445 67889999999999999888889999982 21110 012355443311 345599999998 9
Q ss_pred CCeEEEEEeeeCCC--ceEeeEEEEEEe
Q psy2442 80 DDAVYECVAENGVG--DAVSAEASLTVY 105 (111)
Q Consensus 80 d~g~y~c~~~~~~~--~~~~~~~~l~~~ 105 (111)
|+|.|.|.+.+..+ ........|.|.
T Consensus 81 D~G~Y~C~~~~~~~~~~~~~~~~~l~V~ 108 (213)
T 3mj8_L 81 DEADYYCQSWDGTNSAWVFGSGTKVTVL 108 (213)
T ss_dssp GCEEEEEEEEETTTTEEEEBCCEEEEEE
T ss_pred hCEEEEEEeccCCcceeEEcCceEEEEe
Confidence 99999999999876 222444556665
No 189
>2fbo_J V1V2;, variable region-containing chitin-binding protein 3; immunoglobulin, VCBP, V-type, V SET, immune system; 1.85A {Branchiostoma floridae}
Probab=99.30 E-value=3.7e-11 Score=67.61 Aligned_cols=87 Identities=14% Similarity=0.211 Sum_probs=60.7
Q ss_pred eeEEecCC---CeeEE-cCcceeeecCCcEEEEEEEeccCCCeEEEEECCeeccCCC-----------------------
Q psy2442 3 RKVRFLDP---PEITL-RPRNQAVKAGGITSFYCIARGDPIPVIQWRKNGKRVSGTQ----------------------- 55 (111)
Q Consensus 3 ~~l~v~~~---p~~~~-~~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~~~~~~~~~----------------------- 55 (111)
+.|.|..+ +.+.. .+..+.+..|+.+.|.|.+.+.|.|.+.|++++..+....
T Consensus 125 ~~l~V~~~~~~~~~~~~~~~~~~v~~g~~v~L~C~~~g~p~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (250)
T 2fbo_J 125 VVLKVTGHTPSNNVHVSTAEVVQVDEGNDITMTCPCTDCANANVTWYTGPTFFENYETGTYQPLANKNQFGITWFSSEIA 204 (250)
T ss_dssp EEEEETTTSCCSCCEECCCSEEECCTTCCEEECCCEESCTTCEEEEEEEEECSSCSSSCEEEEEEEECTTSCEEECTTTT
T ss_pred EEEEEeccCCCCeEEEecCceEEecCCCcEEEEEEecCCCCCeeEEEeCCCcccccccCcceeEeccCCCCccccCceEe
Confidence 45666654 33332 2334566779999999999998888999999987664321
Q ss_pred CceEEEeCCCCCeEEEEccCCCCCCCeEEEEEeeeCCCc
Q psy2442 56 SRYMVQEFPPGGSLLRIEPVRHARDDAVYECVAENGVGD 94 (111)
Q Consensus 56 ~~~~~~~~~~~~~~l~~~~~~~~~d~g~y~c~~~~~~~~ 94 (111)
.+.... ....|.|.++.. .|+|.|.|.+.|..|.
T Consensus 205 ~~~~~~----~~~~L~i~~v~~-~D~G~Y~C~a~N~~g~ 238 (250)
T 2fbo_J 205 GRASFS----GARNLVIRAAKI-TDAGRVWCELATGQGE 238 (250)
T ss_dssp TSEEEE----TTTEEEECSCCG-GGCEEEEEEEESSSSG
T ss_pred cccccC----CccEEEEecCCc-ccCEEEEEEecCCccc
Confidence 011000 224599999998 9999999999996653
No 190
>3sgj_C Human FCG3A receptor; receptor complex, FC receptor, antibody, immune system; HET: NAG BMA MAN FUC; 2.20A {Homo sapiens} PDB: 3sgk_C*
Probab=99.30 E-value=5.3e-11 Score=65.64 Aligned_cols=82 Identities=21% Similarity=0.237 Sum_probs=62.0
Q ss_pred CCCeeEEcCcceeeecCCcEEEEEEEeccCCCe-EEEEECCeeccCCCCceEEEeCCCCCeEEEEccCCCCCCCeEEEEE
Q psy2442 9 DPPEITLRPRNQAVKAGGITSFYCIARGDPIPV-IQWRKNGKRVSGTQSRYMVQEFPPGGSLLRIEPVRHARDDAVYECV 87 (111)
Q Consensus 9 ~~p~~~~~~~~~~~~~g~~~~l~c~~~~~~~~~-~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~g~y~c~ 87 (111)
..|.+...+....+..|+.+.|.|.+.+.+.+. +.|++++..+... ...|.|.++.. .|+|.|.|.
T Consensus 6 p~p~i~~~p~~~~v~~G~~v~L~C~~~~~p~~~~v~W~k~g~~l~~~------------~~~L~i~~v~~-~D~G~Y~C~ 72 (204)
T 3sgj_C 6 PKAVVFLEPQWYRVLEKDSVTLKCQGAYSPEDQSTQWFHNESLISSQ------------ASSYFIDAATV-DDSGEYRCQ 72 (204)
T ss_dssp CBCEEEEESCCSEEETTCCEEEEEECCSSSSCCCEEEEETTEEESCC------------SSEEEESSCCG-GGCEEEEEE
T ss_pred CCCeEEEcCCCeEEECCCCEEEEEcCCCCCCCcEEEEEECCEEcccC------------ccEEEEecccc-cCCEEEEEE
Confidence 346666667667889999999999999887775 9999998877532 24488999998 999999999
Q ss_pred eeeCCCceEeeEEEEEEec
Q psy2442 88 AENGVGDAVSAEASLTVYE 106 (111)
Q Consensus 88 ~~~~~~~~~~~~~~l~~~~ 106 (111)
+.|... +..+.|.+..
T Consensus 73 a~n~~~---s~~~~l~V~~ 88 (204)
T 3sgj_C 73 TQLSTL---SDPVQLEVHI 88 (204)
T ss_dssp ETTSBC---CCCEEEEEEC
T ss_pred eCCCcc---cccEEEEEec
Confidence 987432 3344555543
No 191
>2ec8_A MAST/stem cell growth factor receptor; glycoprotein, receptor tyrosine kinase, growth factor cytoki dimerization, transferase; HET: NAG; 3.00A {Homo sapiens} PDB: 2e9w_A*
Probab=99.29 E-value=1.3e-10 Score=71.81 Aligned_cols=104 Identities=16% Similarity=0.266 Sum_probs=74.1
Q ss_pred eeEEec----CCCeeEEcCcceeeecCCcEEEEEEEeccCCCe-EEEEECCeeccCC-CCceEEEeC--CCCCeEEEEcc
Q psy2442 3 RKVRFL----DPPEITLRPRNQAVKAGGITSFYCIARGDPIPV-IQWRKNGKRVSGT-QSRYMVQEF--PPGGSLLRIEP 74 (111)
Q Consensus 3 ~~l~v~----~~p~~~~~~~~~~~~~g~~~~l~c~~~~~~~~~-~~w~~~~~~~~~~-~~~~~~~~~--~~~~~~l~~~~ 74 (111)
+.|.|. .+|.+...+....+..|+.+.|.|.+.+.|.+. +.|++++..+... ..+...... ......|.|.+
T Consensus 200 ~~l~V~~~~~~~p~i~~~~~~~~v~~G~~v~L~C~~~g~p~p~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~ 279 (524)
T 2ec8_A 200 FILKVRPAFKAVPVVSVSKASYLLREGEEFTVTCTIKDVSSSVYSTWKRENSQTKLQEKYNSWHHGDFNYERQATLTISS 279 (524)
T ss_dssp EECCEECCCCSCCEEECSCSEEEEETTSCEEEEEEEEESSTTCEEEEEETTCSCCCCEEEEEEECSSSCEEEEEEEEESS
T ss_pred EEEEEEeCCCCCCcEEecCCcceEEcCCcEEEEEEEecCCCcEEEEEEeCCCCCccccccccccccCCccceEEEEEECC
Confidence 445554 677877777777888999999999999988886 9999998873111 011111100 00235599999
Q ss_pred CCCCCCCeEEEEEeeeCCCceEeeEEEEEEecCC
Q psy2442 75 VRHARDDAVYECVAENGVGDAVSAEASLTVYEGE 108 (111)
Q Consensus 75 ~~~~~d~g~y~c~~~~~~~~~~~~~~~l~~~~~~ 108 (111)
+.. .|.|.|.|.+.|..|.. ...+.|.|..+|
T Consensus 280 ~~~-~D~G~Y~C~a~n~~g~~-~~~~~l~V~~~p 311 (524)
T 2ec8_A 280 ARV-NDSGVFMCYANNTFGSA-NVTTTLEVVDKG 311 (524)
T ss_dssp CCT-TTCEEEEEEEECSSCEE-EEEEEEEEESSC
T ss_pred CCH-HHCEEEEEEEEecCCce-EEEEEEEEeccC
Confidence 998 99999999999988874 667777776554
No 192
>3gkz_A Anti-methamphetamine single chain FV; therapeutic antibody, MDMA, IGG, immune system; HET: B40; 1.90A {Mus musculus} PDB: 3gm0_A* 1rvf_L 3ab0_C 2a0l_C 3iy5_A
Probab=99.29 E-value=7.9e-11 Score=66.82 Aligned_cols=95 Identities=17% Similarity=0.240 Sum_probs=62.0
Q ss_pred CeeEEcCcceeeecCCcEEEEEEEeccCCC-eEEEEEC--Ceecc-----------CCCCceEEEeCCCCCeEEEEccCC
Q psy2442 11 PEITLRPRNQAVKAGGITSFYCIARGDPIP-VIQWRKN--GKRVS-----------GTQSRYMVQEFPPGGSLLRIEPVR 76 (111)
Q Consensus 11 p~~~~~~~~~~~~~g~~~~l~c~~~~~~~~-~~~w~~~--~~~~~-----------~~~~~~~~~~~~~~~~~l~~~~~~ 76 (111)
+.+...+....+..|++++|.|.+.+.+.+ .+.|++. +..+. ....++...... ....|.|.++.
T Consensus 142 ~~~~~~p~~~~v~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~-~~~~L~I~~v~ 220 (257)
T 3gkz_A 142 IVLTQSPAIMSASPGEKVTLTCSASSSVSSSHLYWYQQKPGSSPKLWIYSTSNLASGVPARFSGSGSG-TSYSLTISSME 220 (257)
T ss_dssp CCEECSCSEEEECTTCCEEEEEEESSCCCGGGEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEET-TEEEEEESSCC
T ss_pred eEEEcCCceEEEeCCCcEEEEEEEccCccceEEEEEEECCCCCcEEEEEEccccCCCcCCCEEEecCC-CEEEEEECCCC
Confidence 455566666788899999999999887777 8999983 22211 001344332211 33459999999
Q ss_pred CCCCCeEEEEEeeeCCCceEeeEEEEEEecC
Q psy2442 77 HARDDAVYECVAENGVGDAVSAEASLTVYEG 107 (111)
Q Consensus 77 ~~~d~g~y~c~~~~~~~~~~~~~~~l~~~~~ 107 (111)
. .|+|.|.|.+.+...........|.|...
T Consensus 221 ~-~D~G~Y~C~~~~~~~~~fg~gt~l~v~~~ 250 (257)
T 3gkz_A 221 A-EDAASYFCHQWSSFPFTFGSGTKLEIKRA 250 (257)
T ss_dssp G-GGCEEEEEEECSSSSCEECCCEEEEECCC
T ss_pred h-HHCEEEEEEEccCCceEEcCCEEEEEEeC
Confidence 8 99999999998754332233445555433
No 193
>1e07_A Carcinoembryonic antigen; glycoprotein, CEA, tumour marker, immunoglobulin-fold; NMR {Homo sapiens} PDB: 2dks_A
Probab=99.28 E-value=2.1e-10 Score=72.36 Aligned_cols=99 Identities=22% Similarity=0.369 Sum_probs=70.3
Q ss_pred eEEecC---CCeeEEcCcceeeecCCcEEEEEEEeccCCCeEEEEECCeeccCCCCceEEEeCCCCCeEEEEccCCCCCC
Q psy2442 4 KVRFLD---PPEITLRPRNQAVKAGGITSFYCIARGDPIPVIQWRKNGKRVSGTQSRYMVQEFPPGGSLLRIEPVRHARD 80 (111)
Q Consensus 4 ~l~v~~---~p~~~~~~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d 80 (111)
+|.|.. +|.+.. .....+..|+.+.|.|.+.+ |.+.+.|++++..+... .++.... ....|.|.++.. .|
T Consensus 103 ~l~V~~~~~~p~i~~-~~~~~v~~g~~v~l~C~~~~-p~~~v~W~~~g~~l~~~-~~~~~~~---~~~~L~i~~~~~-~d 175 (642)
T 1e07_A 103 QFRVYPELPKPSISS-NNSKPVEDKDAVAFTCEPET-QDATYLWWVNNQSLPVS-PRLQLSN---GNRTLTLFNVTR-ND 175 (642)
T ss_pred EEEecccCCCCcEEc-cCceeEecCCcEEEEEECCC-CCeeEEEEECCeECCCC-CceEEcC---CCCEEEEeCCCc-cc
Confidence 455554 344432 22345778999999999988 78899999999887643 4444432 345689999998 99
Q ss_pred CeEEEEEeeeCCCceEeeEEEEEEecCCC
Q psy2442 81 DAVYECVAENGVGDAVSAEASLTVYEGEE 109 (111)
Q Consensus 81 ~g~y~c~~~~~~~~~~~~~~~l~~~~~~~ 109 (111)
.|.|.|.+.|..+...+..+.|.+...|.
T Consensus 176 ~G~Y~C~a~n~~~~~~s~~~~l~V~~~p~ 204 (642)
T 1e07_A 176 TASYKCETQNPVSARRSDSVILNVLYGPD 204 (642)
T ss_pred CeeEEEEEecCCCCcccceEEEEEEeCCC
Confidence 99999999998775434566777765543
No 194
>1pko_A Myelin oligodendrocyte glycoprotein; IGV-domain, immune system; 1.45A {Rattus norvegicus} SCOP: b.1.1.1 PDB: 1pkq_E 3csp_A 1py9_A
Probab=99.28 E-value=6.7e-10 Score=57.69 Aligned_cols=91 Identities=19% Similarity=0.197 Sum_probs=61.2
Q ss_pred cCcceeeecCCcEEEEEEEeccCC---CeEEEEECCee--c---c-----------CCCCceEEEeC--CCCCeEEEEcc
Q psy2442 16 RPRNQAVKAGGITSFYCIARGDPI---PVIQWRKNGKR--V---S-----------GTQSRYMVQEF--PPGGSLLRIEP 74 (111)
Q Consensus 16 ~~~~~~~~~g~~~~l~c~~~~~~~---~~~~w~~~~~~--~---~-----------~~~~~~~~~~~--~~~~~~l~~~~ 74 (111)
++..+.+..|++++|.|...+.+. +.+.|++.+.. + . ....|+.+... ......|.|.+
T Consensus 12 ~~~~v~~~~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~v~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~ 91 (139)
T 1pko_A 12 PGHPIRALVGDEAELPCRISPGKNATGMEVGWYRSPFSRVVHLYRNGKDQDAEQAPEYRGRTELLKESIGEGKVALRIQN 91 (139)
T ss_dssp CSSCEEEETTSCEEEEEEEESCCCCTTSEEEEEEC--CCEEEEEETTEECGGGSCSTTTTSEEEECTTGGGTEEEEEESS
T ss_pred CCCCEEEEeCCCEEEeeEccCCCCCCceEEEEEECCCCceEEEEeCCcccccccCcccCCceEEccccccCCeEEEEEcc
Confidence 444578889999999999876542 58999987641 1 0 00234444321 01234599999
Q ss_pred CCCCCCCeEEEEEeeeCCCceEeeEEEEEEecCC
Q psy2442 75 VRHARDDAVYECVAENGVGDAVSAEASLTVYEGE 108 (111)
Q Consensus 75 ~~~~~d~g~y~c~~~~~~~~~~~~~~~l~~~~~~ 108 (111)
++. .|+|.|.|.+.+..+. ....+.|.|..++
T Consensus 92 v~~-~D~G~Y~C~v~~~~~~-~~~~~~L~V~~P~ 123 (139)
T 1pko_A 92 VRF-SDEGGYTCFFRDHSYQ-EEAAVELKVEDPF 123 (139)
T ss_dssp CCG-GGCEEEEEEEEETTEE-EEEEEEEEEECTT
T ss_pred CCH-HHCEEEEEEEEcCCCc-eEEEEEEEEecCc
Confidence 998 9999999999998765 3667778777543
No 195
>3qs7_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, CY receptor complex, extracellular complex; HET: NAG; 4.30A {Homo sapiens}
Probab=99.28 E-value=8.5e-11 Score=71.30 Aligned_cols=87 Identities=6% Similarity=0.050 Sum_probs=60.3
Q ss_pred EcCcceeeecCCcEEEEEEEeccCCCeEEEEECCeeccCCCCceEEEeCCCCCeEEEEccCCCCCCCeEEEEEeeeCCCc
Q psy2442 15 LRPRNQAVKAGGITSFYCIARGDPIPVIQWRKNGKRVSGTQSRYMVQEFPPGGSLLRIEPVRHARDDAVYECVAENGVGD 94 (111)
Q Consensus 15 ~~~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~g~y~c~~~~~~~~ 94 (111)
..+..+.+.+|+++.|.|.+.+.|.+.+.|++++..+... ..+.. .......|.|.++.. .|+|.|.|.+.|..|.
T Consensus 53 ~~~~~v~V~~G~~v~L~C~v~g~P~p~i~W~~~~~~l~~~-~~~~~--~~~~~~sL~I~~v~~-~D~G~Y~C~a~N~~g~ 128 (423)
T 3qs7_E 53 YEAAAVEVDVSASITLQVLVDAPGNISCLWVFKHSSLNCQ-PHFDL--QNRGVVSMVILKMTE-TQAGEYLLFIQSEATN 128 (423)
T ss_dssp ---CEEEECSSCCEEEEEECSCCSSCEEEEEETTEEECCC-CBC-------CEEEEEESSCCS-SSCSEEEEEEEC--CE
T ss_pred eccccEEEecCCcEEEEEEEEcCCCCeEEEEECCCccCcc-ceecc--ccceEEEEEEeecCc-ccCEEEEEEEEcCCCc
Confidence 3444678899999999999999999999999998776432 11110 000223488999998 9999999999999886
Q ss_pred eEeeEEEEEEec
Q psy2442 95 AVSAEASLTVYE 106 (111)
Q Consensus 95 ~~~~~~~l~~~~ 106 (111)
. ...+.|.|..
T Consensus 129 ~-~~~~~l~V~~ 139 (423)
T 3qs7_E 129 Y-TILFTVSIRN 139 (423)
T ss_dssp E-EEEEEEEEC-
T ss_pred E-EEEEEEEEec
Confidence 4 6666666653
No 196
>1f3r_B FV antibody fragment; IG-fold, immuno complex, antibody-antigen, beta-turn, immune system; HET: NLE; NMR {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.1
Probab=99.28 E-value=3.8e-11 Score=68.22 Aligned_cols=76 Identities=20% Similarity=0.274 Sum_probs=54.5
Q ss_pred EcCcceeeecCCcEEEEEEEeccCCCeEEEEE--CCeecc-----------CCCCceEEEeCCCCCeEEEEccCCCCCCC
Q psy2442 15 LRPRNQAVKAGGITSFYCIARGDPIPVIQWRK--NGKRVS-----------GTQSRYMVQEFPPGGSLLRIEPVRHARDD 81 (111)
Q Consensus 15 ~~~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~--~~~~~~-----------~~~~~~~~~~~~~~~~~l~~~~~~~~~d~ 81 (111)
..+..+.+..|++++|.|.+.+.+.+.+.|++ .+..+. ....++...... ....|.|.++.. .|+
T Consensus 144 ~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~-~~~~L~I~~v~~-~D~ 221 (257)
T 1f3r_B 144 QSPSLLSASVGDRVTLSCKGSQNINNYLAWYQQKLGEAPKLLIYNTNSLQTGIPSRFSGSGSG-TDYTLTISSLQP-EDV 221 (257)
T ss_dssp EETSEECCCTTCCEEEEEECSSCCBTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEEB-TEEEEEECSCCG-GGC
T ss_pred ccCCEEEEcCCCCEEEEEEECCcCCCcEEEEEECCCCCcEEEEEEccCCCCCcCCCEEEecCC-CEEEEEECCCCh-hhC
Confidence 44555678899999999999888888999999 444321 012344433211 334599999998 999
Q ss_pred eEEEEEeeeCC
Q psy2442 82 AVYECVAENGV 92 (111)
Q Consensus 82 g~y~c~~~~~~ 92 (111)
|.|.|.+.|..
T Consensus 222 G~Y~C~a~n~~ 232 (257)
T 1f3r_B 222 ATYFCYQYNNG 232 (257)
T ss_dssp SEEEEEEESSS
T ss_pred EEEEEEEeCCC
Confidence 99999999864
No 197
>2d3v_A Leukocyte immunoglobulin-like receptor subfamily A member 5 isoform 1; immunoglobulin-like fold, immune system; 1.85A {Homo sapiens}
Probab=99.27 E-value=1.1e-11 Score=67.71 Aligned_cols=88 Identities=13% Similarity=0.118 Sum_probs=49.0
Q ss_pred eeEEecC---CCeeEEcCcceeeecCCcEEEEEEEeccCCCeEEEEECCeeccCCCCceEEEeCCCCCeEEEEccCCCCC
Q psy2442 3 RKVRFLD---PPEITLRPRNQAVKAGGITSFYCIARGDPIPVIQWRKNGKRVSGTQSRYMVQEFPPGGSLLRIEPVRHAR 79 (111)
Q Consensus 3 ~~l~v~~---~p~~~~~~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 79 (111)
+.|.|.. +|.+...+. ..+..|+.++|.|.+.+.+ +.+.|++++..+..................|.|.++.. .
T Consensus 90 ~~l~V~~~~~~p~i~~~~~-~~v~~G~~v~L~C~~~~~p-~~~~W~k~g~~~~~~~~~~~~~~~~~~~~~L~I~~v~~-~ 166 (196)
T 2d3v_A 90 LELVVTGFYNKPTLSALPS-PVVTSGENVTLQCGSRLRF-DRFILTEEGDHKLSWTLDSQLTPSGQFQALFPVGPVTP-S 166 (196)
T ss_dssp EEEEEECSSCCCEEEC------------CEEEEEESSCC-SEEEEEEC---CCEEEEECEECTTSCEEEEEECCCCBT-T
T ss_pred EEEEecCCCCCCeEEccCC-ccccCCCcEEEEEEcCCCC-CEEEEEccCCcccccccccccccCCCceeEEEeeecCc-c
Confidence 3466655 455543332 4677899999999999887 89999999887632100101110000125589999998 9
Q ss_pred CCeEEEEEeeeCCC
Q psy2442 80 DDAVYECVAENGVG 93 (111)
Q Consensus 80 d~g~y~c~~~~~~~ 93 (111)
|.|.|.|.+.|..+
T Consensus 167 D~G~Y~C~a~n~~~ 180 (196)
T 2d3v_A 167 HRWMLRCYGSRRHI 180 (196)
T ss_dssp BCEEEEEEEEETTE
T ss_pred cCeeEEEEEEccCC
Confidence 99999999998653
No 198
>3kld_A Contactin 4, axcam, BIG-2; cell adhesion, protein complex, receptor protein tyrosine phosphatase; HET: NAG; 2.00A {Mus musculus} PDB: 3jxa_A*
Probab=99.27 E-value=6.8e-11 Score=70.62 Aligned_cols=82 Identities=30% Similarity=0.625 Sum_probs=60.6
Q ss_pred CcceeeecCCcEEEEEEEeccCCCeEEEEECCe-eccCCCCceEEEeCCCCCeEEEEccCCCCCCCeEEEEEeeeCCCce
Q psy2442 17 PRNQAVKAGGITSFYCIARGDPIPVIQWRKNGK-RVSGTQSRYMVQEFPPGGSLLRIEPVRHARDDAVYECVAENGVGDA 95 (111)
Q Consensus 17 ~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~g~y~c~~~~~~~~~ 95 (111)
+....+..|+.+.|.|.+.+.|.|.+.|++.+. .+.. ...... ....|.|.++.. .|+|.|.|.+.|..|..
T Consensus 212 ~~~~~~~~G~~v~l~C~~~g~P~p~i~W~k~~~~~~~~---~~~~~~---~~~~L~I~~v~~-~D~G~Y~C~a~N~~G~~ 284 (384)
T 3kld_A 212 PETVPAEKGTTVKLECFALGNPVPTILWRRADGKPIAR---KARRHK---SNGILEIPNFQQ-EDAGSYECVAENSRGKN 284 (384)
T ss_dssp CSEEEEETTSCEEEEEEEEEESCCEEEEEETTCCCCCT---TCEECT---TSCEEEECSCCG-GGCEEEEEEEEETTEEE
T ss_pred CCceEecCCCcEEEEEEEeecCCCcEEEEeCCCccccc---cceecC---CCcEEEECCCCh-hhCEEEEEEEEcCCCeE
Confidence 445567889999999999999999999999544 3322 111111 345599999998 99999999999998864
Q ss_pred EeeEEEEEEec
Q psy2442 96 VSAEASLTVYE 106 (111)
Q Consensus 96 ~~~~~~l~~~~ 106 (111)
.....+.+..
T Consensus 285 -~~~~~l~v~~ 294 (384)
T 3kld_A 285 -VAKGQLTFYA 294 (384)
T ss_dssp -EEEEEEEEEE
T ss_pred -EEEEEEEEec
Confidence 5555555544
No 199
>2v5m_A Dscam; neurobiology SPL immunoglobulin domain, cell adhesion, membrane, development protein; HET: NAG; 1.95A {Drosophila melanogaster} PDB: 2v5s_A* 2v5r_A*
Probab=99.27 E-value=6.4e-11 Score=70.48 Aligned_cols=94 Identities=24% Similarity=0.445 Sum_probs=66.1
Q ss_pred CCeeEEcCcc-eeeecCCcEEEEEEEeccCCCeEEEEE-CCeeccCCCCceEEEeCCCCCeEEEEccCCCCCC------C
Q psy2442 10 PPEITLRPRN-QAVKAGGITSFYCIARGDPIPVIQWRK-NGKRVSGTQSRYMVQEFPPGGSLLRIEPVRHARD------D 81 (111)
Q Consensus 10 ~p~~~~~~~~-~~~~~g~~~~l~c~~~~~~~~~~~w~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d------~ 81 (111)
+|.+...+.. +.+..|+.+.|.|.+.+.|.+.+.|++ +|..+....... ... ....|.|.++.. .| .
T Consensus 3 ~P~f~~~p~~~~~~~~G~~v~l~C~~~g~p~p~v~W~k~~g~~~~~~~~~~-~~~---~~~~L~i~~~~~-~d~~~~~d~ 77 (388)
T 2v5m_A 3 GPVFLKEPTNRIDFSNSTGAEIECKASGNPMPEIIWIRSDGTAVGDVPGLR-QIS---SDGKLVFPPFRA-EDYRQEVHA 77 (388)
T ss_dssp EEEEEECCCSEEEEETTTCEEEECEEEEESCCEEEEEETTSCBCCCBTTTB-EEC---STTEEEECCCCG-GGCCHHHHE
T ss_pred CCchhhCCCceEEEEcCccEEEEEECCCCCCCEEEEEcCCCCccccCCCce-EEc---CCceEEecccCh-hhccccccC
Confidence 5666666554 457789999999999999999999999 676664321222 222 234588998887 76 9
Q ss_pred eEEEEEeeeCCCceEeeEEEEEEecCC
Q psy2442 82 AVYECVAENGVGDAVSAEASLTVYEGE 108 (111)
Q Consensus 82 g~y~c~~~~~~~~~~~~~~~l~~~~~~ 108 (111)
|.|.|.+.|..|...+..+.+.+..+|
T Consensus 78 G~Y~C~a~n~~g~~~s~~~~v~v~~~p 104 (388)
T 2v5m_A 78 QVYACLARNQFGSIISRDVHVRAVVAQ 104 (388)
T ss_dssp EEEEEEEEETTEEEECCCEEEEEECCC
T ss_pred ceEEEEEEccCCeEEecceEEEEcccc
Confidence 999999999887533445556555443
No 200
>3s96_B 3B5H10 FAB light chain; huntingtin, immune system; 1.90A {Mus musculus} PDB: 2qhr_L 3ffd_B 4dcq_A
Probab=99.27 E-value=2.1e-10 Score=63.43 Aligned_cols=79 Identities=18% Similarity=0.358 Sum_probs=55.5
Q ss_pred eeEEcCcceeeecCCcEEEEEEEecc-CCCeEEEEECC--eec---------------cCCCCceEEEeCCCCCeEEEEc
Q psy2442 12 EITLRPRNQAVKAGGITSFYCIARGD-PIPVIQWRKNG--KRV---------------SGTQSRYMVQEFPPGGSLLRIE 73 (111)
Q Consensus 12 ~~~~~~~~~~~~~g~~~~l~c~~~~~-~~~~~~w~~~~--~~~---------------~~~~~~~~~~~~~~~~~~l~~~ 73 (111)
.+.+.+ .+.+..|+++.|.|...+. +.+.+.|++.. ... .....++...... ....|.|.
T Consensus 3 ~v~~~p-~~~v~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~-~~~~L~I~ 80 (218)
T 3s96_B 3 VLTQSS-SASFSLGASAKLTCTLNSQHSTYTIEWYQQQPLKPPKYVMELKKDGSHSTGDGIPDRFSGSSSG-ADRYLSIS 80 (218)
T ss_dssp SEECCS-EEEEETTSCEEEEEEECGGGTTCCEEEEEECTTSCCEEEEEECTTSCEEECSSCCTTEEEEEET-TEEEEEES
T ss_pred eEEeCC-cEEECCCCcEEEEEECCCCCCCcEEEEEEECCCCCeEEEEEEcccCccccCCCcccceEEecCC-ceEEEEEc
Confidence 344455 6788999999999999998 88899999832 100 0111344443211 33459999
Q ss_pred cCCCCCCCeEEEEEeeeCCC
Q psy2442 74 PVRHARDDAVYECVAENGVG 93 (111)
Q Consensus 74 ~~~~~~d~g~y~c~~~~~~~ 93 (111)
++.. .|+|.|.|.+.+..|
T Consensus 81 ~v~~-~D~G~Y~C~~~~~~~ 99 (218)
T 3s96_B 81 NIQP-EDEAIYICGVGDTIK 99 (218)
T ss_dssp SCCG-GGCEEEEEEEEEEET
T ss_pred cCCc-ccCEEEEEEEecCCC
Confidence 9998 999999999988664
No 201
>1lk3_L 9D7 light chain; antigen-antibody complex, immune system; 1.91A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 1fn4_A 1c5d_L 1bfo_A 3b9k_L*
Probab=99.27 E-value=2.4e-10 Score=62.96 Aligned_cols=88 Identities=22% Similarity=0.315 Sum_probs=59.4
Q ss_pred CcceeeecCCcEEEEEEEeccCCCeEEEEECC--eec-----------cCCCCceEEEeCCCCCeEEEEccCCCCCCCeE
Q psy2442 17 PRNQAVKAGGITSFYCIARGDPIPVIQWRKNG--KRV-----------SGTQSRYMVQEFPPGGSLLRIEPVRHARDDAV 83 (111)
Q Consensus 17 ~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~~--~~~-----------~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~g~ 83 (111)
+..+.+..|+.+.|.|.+.+.+.+.+.|++.. ..+ .....++...... ....|.|.++.. .|.|.
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~v~W~~~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~-~~~~L~I~~v~~-~D~G~ 84 (210)
T 1lk3_L 7 PPALTVSPGEKLTISCKASESVTSRMHWYQQKPGQQPKLLIYKASNLASGVPARFSGSGSG-TDFTLTIDPVEA-DDTAI 84 (210)
T ss_dssp CSEEEECTTSCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEET-TEEEEEESSCCG-GGCEE
T ss_pred CCcEEEcCCCCEEEEeeCCCccCCCEEEEEECCCCCeEEEEEccccccCCccccEEEEecC-CEEEEEECCCCH-HHCeE
Confidence 56678899999999999998888899999842 211 0112455443211 334699999998 99999
Q ss_pred EEEEeeeCCCceEeeEEEEEEec
Q psy2442 84 YECVAENGVGDAVSAEASLTVYE 106 (111)
Q Consensus 84 y~c~~~~~~~~~~~~~~~l~~~~ 106 (111)
|.|.+.|..+........+.+..
T Consensus 85 Y~C~~~~~~~~~~~~~~~l~V~~ 107 (210)
T 1lk3_L 85 YFCQQSWNGPLTFGAGTKLELKR 107 (210)
T ss_dssp EEEEECSSSSCEECCCEEEEECC
T ss_pred EEEEEEcCCCceeCCCEEEEEcC
Confidence 99999987653222233444443
No 202
>3p2t_A Leukocyte immunoglobulin-like receptor subfamily 4; LILR, IG, inhibitory receptor, disulfide, immune system; 1.70A {Homo sapiens}
Probab=99.27 E-value=4.9e-11 Score=65.18 Aligned_cols=97 Identities=16% Similarity=0.240 Sum_probs=62.3
Q ss_pred eEEec---CCCeeEEcCcceeeecCCcEEEEEEEeccCCCeEEEEECCeeccCCCCceEEEeCCCCCeEEEEccCCCCCC
Q psy2442 4 KVRFL---DPPEITLRPRNQAVKAGGITSFYCIARGDPIPVIQWRKNGKRVSGTQSRYMVQEFPPGGSLLRIEPVRHARD 80 (111)
Q Consensus 4 ~l~v~---~~p~~~~~~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d 80 (111)
.|.|. .+|.+...+.. .+..|+.++|.|.+.+. ++.+.|++++..+............. ....|.|.++.. .|
T Consensus 91 ~l~V~~~~~~p~~~~~~~~-~v~~G~~v~L~C~~~~~-~~~~~w~k~g~~~~~~~~~~~~~~~~-~~~~L~i~~v~~-~d 166 (196)
T 3p2t_A 91 ELVMTGAYSKPTLSALPSP-LVTSGKSVTLLCQSRSP-MDTFLLCKERAAHPLLCLRSEHGAQQ-HQAEFPMSPVTS-VH 166 (196)
T ss_dssp EEEEECSSCCCEEEEESCS-EECTTCCEEEEEEEEEE-EEEEEEEETTCCCGGGSEEEEEEEEE-EEEEEEECSCCG-GG
T ss_pred EEEecCCCCCCEEEeCCcc-eecCCCeEEEEEecCCC-CCEEEEEeCCCcccceeecccccccC-cceEEEeCCCcc-cC
Confidence 45553 24555544443 67899999999998874 45889999987664321111110000 335599999998 99
Q ss_pred CeEEEEEeeeCCC----ceEeeEEEEEE
Q psy2442 81 DAVYECVAENGVG----DAVSAEASLTV 104 (111)
Q Consensus 81 ~g~y~c~~~~~~~----~~~~~~~~l~~ 104 (111)
.|.|.|.+.|..+ ...+..+.|.|
T Consensus 167 ~G~Y~C~a~n~~~~~~~s~~S~~~~l~V 194 (196)
T 3p2t_A 167 GGTYRCFSSHGFSHYLLSHPSDPLELIV 194 (196)
T ss_dssp CEEEEEEEECGGGTTEECCCCCCEEEEE
T ss_pred CCeEEEEEEcCCCCcccCCCCCCEEEEe
Confidence 9999999999764 22244555554
No 203
>1nbq_A JAM, junctional adhesion molecule 1, PAM-1; reovirus receptor, tight junction formation, immunoglobulin superfamily, immune system; 2.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4 PDB: 3eoy_G
Probab=99.27 E-value=3.9e-11 Score=65.74 Aligned_cols=95 Identities=14% Similarity=0.256 Sum_probs=67.8
Q ss_pred CCeeEEcCcceeeecCCcEEEEEEEeccCCCeEEEEECCeec-----------cCCCCceEEEeCCCCCeEEEEccCCCC
Q psy2442 10 PPEITLRPRNQAVKAGGITSFYCIARGDPIPVIQWRKNGKRV-----------SGTQSRYMVQEFPPGGSLLRIEPVRHA 78 (111)
Q Consensus 10 ~p~~~~~~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~~~~~-----------~~~~~~~~~~~~~~~~~~l~~~~~~~~ 78 (111)
+..+...+..+.+..|+.+.|.|...+.+.+.+.|++++..+ .....++... . ..|.|.++..
T Consensus 4 ~~~i~~~~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~r~~~~----~-~~L~i~~~~~- 77 (209)
T 1nbq_A 4 SVTVHSSEPEVRIPENNPVKLSCAYSGFSSPRVEWKFDQGDTTRLVCYNNKITASYEDRVTFL----P-TGITFKSVTR- 77 (209)
T ss_dssp CCEEECSCSBCCEETTCCCEEECEEESCSSEEEEEEEEETTEEEESEETTEECTTTTTTCEEE----T-TEEECSCCCT-
T ss_pred eEEEEcCCCceEEEcCCCEEEEEEEeCCCCcEEEEEEcCCceeEEEEecCccCccccCceEee----c-cEEEEeeCCH-
Confidence 455556677778899999999999998888899999876542 1112344332 2 4488999998
Q ss_pred CCCeEEEEEeeeCCCc-eEeeEEEEEEecCCCC
Q psy2442 79 RDDAVYECVAENGVGD-AVSAEASLTVYEGEEK 110 (111)
Q Consensus 79 ~d~g~y~c~~~~~~~~-~~~~~~~l~~~~~~~~ 110 (111)
.|.|.|.|.+.+..|. .....+.+.+..+|..
T Consensus 78 ~d~G~Y~C~~~~~~g~~~~~~~~~l~V~~~p~~ 110 (209)
T 1nbq_A 78 EDTGTYTCMVSEEGGNSYGEVKVKLIVLVPPSK 110 (209)
T ss_dssp TSCSEEEEEEEETTSSCEECCEEECCEEBCCCC
T ss_pred HHCcEEEEEEecCCCCccceEEEEEEEecCCcC
Confidence 9999999999987542 1245666667666543
No 204
>2y25_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin-like D; 3.50A {Homo sapiens}
Probab=99.27 E-value=8.4e-11 Score=68.18 Aligned_cols=87 Identities=16% Similarity=0.244 Sum_probs=64.1
Q ss_pred cCCCeeEEcCcceeeecCCcEEEEEEEecc-CCCeEEEEECCeeccCCCCceEEEeCCCCCeEEEEccCCCCCCCeEEEE
Q psy2442 8 LDPPEITLRPRNQAVKAGGITSFYCIARGD-PIPVIQWRKNGKRVSGTQSRYMVQEFPPGGSLLRIEPVRHARDDAVYEC 86 (111)
Q Consensus 8 ~~~p~~~~~~~~~~~~~g~~~~l~c~~~~~-~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~g~y~c 86 (111)
..+|.+.... ...+..|+.+.|.|.+.+. |.+.+.|++++..+... .++.... ....|.|.++.. .|.|.|.|
T Consensus 5 ~~~P~~~~~~-~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~~~~~~~~-~~~~~~~---~~~~L~i~~~~~-~d~G~Y~C 78 (317)
T 2y25_A 5 FTGPHFVEYL-SWEVTGECNVLLKCKVANIKKETHIVWYKDEREISVD-EKHDFKD---GICTLLITEFSK-KDAGIYEV 78 (317)
T ss_dssp SSCCEEEEEE-EEEEETTTEEEEEEEEESCCTTCEEEEEETTEEECCS-CC--------CCEEEEETTCCS-TTCSCEEE
T ss_pred cCCCcEeeee-eEEECCCCeEEEEEEEcCCCCCCEEEEEECCeEcCCC-CcEEEEC---CeEEEEEccCCc-ccCeEEEE
Confidence 4567776444 4788899999999998887 67899999999888643 3433322 445699999998 99999999
Q ss_pred EeeeCCCceEeeEEE
Q psy2442 87 VAENGVGDAVSAEAS 101 (111)
Q Consensus 87 ~~~~~~~~~~~~~~~ 101 (111)
.+.|..|.. ...+.
T Consensus 79 ~~~n~~g~~-~~~~~ 92 (317)
T 2y25_A 79 ILKDDRGKD-KSRLK 92 (317)
T ss_dssp EEESSSCEE-EEEEC
T ss_pred EEECCCCcE-EEEEE
Confidence 999987753 44433
No 205
>1vca_A VCAM-D1,2, human vascular cell adhesion molecule-1; immunoglobulin superfamily, integrin-binding, cell adhesion protein; 1.80A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ij9_A 1vsc_A
Probab=99.26 E-value=7.3e-11 Score=65.01 Aligned_cols=106 Identities=15% Similarity=0.112 Sum_probs=64.9
Q ss_pred eeEEecCCCee-EEcCcceeeecCCcEEEEEEEeccCC---CeEEEEECCeeccCCCCceEEEeC--CCCCeEEEEccCC
Q psy2442 3 RKVRFLDPPEI-TLRPRNQAVKAGGITSFYCIARGDPI---PVIQWRKNGKRVSGTQSRYMVQEF--PPGGSLLRIEPVR 76 (111)
Q Consensus 3 ~~l~v~~~p~~-~~~~~~~~~~~g~~~~l~c~~~~~~~---~~~~w~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~~~~ 76 (111)
++|.|..+|.. ...+. ..+..|+.++|.|.+.+.++ +.+.|++++..+............ ......|.+....
T Consensus 84 ~~l~V~~~p~~~~~~~~-~~~~~G~~~~L~C~~~~~~p~~~~~i~W~k~~~~l~~~~~~~~~~~~~~~~~~~~l~i~~~~ 162 (202)
T 1vca_A 84 IQVEIYSFPKDPEIHLS-GPLEAGKPITVKCSVADVYPFDRLEIDLLKGDHLMKSQEFLEDADRKSLETKSLEVTFTPVI 162 (202)
T ss_dssp EEEEEEBCCSCCEEEES-SCEETTSCEEEEEEEEEEBSGGGEEEEEEETTEEEEEEECCSCCSSCCCEEEEEEEEECCCG
T ss_pred EEEEEEeCCCCCEeCCc-eEEcCCCCEEEEEEECCcCCCCCeEEEEEeCCeECcccccccccCcCcceEEEEEEEEEeee
Confidence 46677765543 22222 46789999999999987543 368999999876421000000000 0011225666666
Q ss_pred CCCCCeEEEEEeeeCCCc------eEeeEEEEEEecCCCC
Q psy2442 77 HARDDAVYECVAENGVGD------AVSAEASLTVYEGEEK 110 (111)
Q Consensus 77 ~~~d~g~y~c~~~~~~~~------~~~~~~~l~~~~~~~~ 110 (111)
. .|.|.|.|.+.|..+. .....+.|.|.++|..
T Consensus 163 ~-d~~g~ytC~A~n~~~~~~~~~~~~~~~~~L~V~y~P~~ 201 (202)
T 1vca_A 163 E-DIGKVLVCRAKLHIDEMDSVPTVRQAVKELQVYISPKN 201 (202)
T ss_dssp G-GTTCEEEEEEEECSCCCTTSCSEEEEEEECCEECCC--
T ss_pred c-cCCCeEEEEEEccccCCCCcceeEeeEEEEEEecCCCC
Confidence 5 6788999999998764 1355778888888764
No 206
>1qok_A MFE-23 recombinant antibody fragment; immunoglobulin, single-chain FV, anti-carcinoembryonic antigen; 2.4A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=99.26 E-value=2.4e-10 Score=65.83 Aligned_cols=91 Identities=19% Similarity=0.281 Sum_probs=60.7
Q ss_pred eeEEcCcceeeecCCcEEEEEEEeccCCCeEEEEE--CCeecc-----------CCCCceEEEeCCCCCeEEEEccCCCC
Q psy2442 12 EITLRPRNQAVKAGGITSFYCIARGDPIPVIQWRK--NGKRVS-----------GTQSRYMVQEFPPGGSLLRIEPVRHA 78 (111)
Q Consensus 12 ~~~~~~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~--~~~~~~-----------~~~~~~~~~~~~~~~~~l~~~~~~~~ 78 (111)
.+...+..+.+..|++++|.|.+.+.+ +.+.|++ .+..+. ....++...... ....|.|.++..
T Consensus 164 ~~~~~p~~~~v~~G~~v~L~C~~~~~~-~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~-~~~~L~I~~v~~- 240 (282)
T 1qok_A 164 VLTQSPAIMSASPGEKVTITCSASSSV-SYMHWFQQKPGTSPKLWIYSTSNLASGVPARFSGSGSG-TSYSLTISRMEA- 240 (282)
T ss_dssp CEEEECSEEEECTTCCEEEEEEESSCC-SCCEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEET-TEEEEEESSCCG-
T ss_pred EEecCCCEEEEcCCCcEEEEEEecCCC-ceEEEEEECCCCCcEEEEEEecCCCCcccCCeEEecCC-CEEEEEEccCCh-
Confidence 344556667788999999999999888 8999999 444331 112445433211 334599999998
Q ss_pred CCCeEEEEEeeeCCCceEeeEEEEEEe
Q psy2442 79 RDDAVYECVAENGVGDAVSAEASLTVY 105 (111)
Q Consensus 79 ~d~g~y~c~~~~~~~~~~~~~~~l~~~ 105 (111)
.|+|.|.|.+.+..+........|.|.
T Consensus 241 ~DsG~Y~C~a~~~~~~~fg~gt~l~V~ 267 (282)
T 1qok_A 241 EDAATYYCQQRSSYPLTFGAGTKLELK 267 (282)
T ss_dssp GGCEEEEEEECSSSSCEECCCEEEEEC
T ss_pred hHCEEEEEEEeeCCCceEeCCEEEEEe
Confidence 999999999987533222333445544
No 207
>4fa8_A Secreted protein BARF1; immunoglobulin-like domains, 4-helix bundle fold, viral PROT cytokine complex; HET: NAG BMA; 2.20A {Human herpesvirus 4} PDB: 2ch8_A* 3uez_A* 4adf_A* 4adq_A*
Probab=99.26 E-value=1.7e-11 Score=67.72 Aligned_cols=86 Identities=14% Similarity=0.180 Sum_probs=59.5
Q ss_pred ceeeecCCcEEEEEE---EeccCCCeEEEEECCeeccC----------------CCCceEEEeCCCCCeEEEEccCCCCC
Q psy2442 19 NQAVKAGGITSFYCI---ARGDPIPVIQWRKNGKRVSG----------------TQSRYMVQEFPPGGSLLRIEPVRHAR 79 (111)
Q Consensus 19 ~~~~~~g~~~~l~c~---~~~~~~~~~~w~~~~~~~~~----------------~~~~~~~~~~~~~~~~l~~~~~~~~~ 79 (111)
.+.+..|+.++|.|. +.+.|.+.+.|++.|..... ...++...... ....|.|.++.. .
T Consensus 2 ~Vta~~Ge~v~L~C~~~~v~~~p~~~V~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~L~I~~v~~-~ 79 (203)
T 4fa8_A 2 AVTAFLGERVTLTSYWRRVSLGPEIEVSWFKLGPGEEQVLIGRMHHDVIFIEWPFRGFFDIHRSA-NTFFLVVTAANI-S 79 (203)
T ss_dssp CCEEETTCCEEEEEECSSTTCSTTSEEEEEEEETTTEEEEEEEEETTEEEECGGGBTTEEEEEET-TEEEEEESSCCG-G
T ss_pred CeEEEcCCCEEEEeeeeccCCCCCcEEEEEEcCCCcceEEEEecCCceEEeeccccceEEEEEcC-CEEEEEEccCCH-H
Confidence 467889999999996 45678889999987542210 01122222211 345599999998 9
Q ss_pred CCeEEEEEeeeCCCceEeeEEEEEEecC
Q psy2442 80 DDAVYECVAENGVGDAVSAEASLTVYEG 107 (111)
Q Consensus 80 d~g~y~c~~~~~~~~~~~~~~~l~~~~~ 107 (111)
|+|.|.|.+.|..|.. ...+.|.|..+
T Consensus 80 D~G~Y~C~a~n~~g~~-~~~~~l~V~~p 106 (203)
T 4fa8_A 80 HDGNYLCRMKLGETEV-TKQEHLSVVKP 106 (203)
T ss_dssp GCEEEEEEEEETTEEE-EEEEEEEEEEE
T ss_pred HCeEEEEEEEcCCCcE-EEEEEEEecCC
Confidence 9999999999988764 66666666543
No 208
>2c1o_A IGK-C protein; FAB fragment, enantioselective, finrozole, immune system, antibody, ENA11His antibody, immunoglobulin domain; 2.75A {Mus musculus}
Probab=99.26 E-value=1.8e-10 Score=65.19 Aligned_cols=83 Identities=20% Similarity=0.274 Sum_probs=58.8
Q ss_pred CCCeeEEcCcceeeecCCcEEEEEEEeccC-----CCeEEEEECC--eec-----------cCCCCceEEEeCCCCCeEE
Q psy2442 9 DPPEITLRPRNQAVKAGGITSFYCIARGDP-----IPVIQWRKNG--KRV-----------SGTQSRYMVQEFPPGGSLL 70 (111)
Q Consensus 9 ~~p~~~~~~~~~~~~~g~~~~l~c~~~~~~-----~~~~~w~~~~--~~~-----------~~~~~~~~~~~~~~~~~~l 70 (111)
.++.+...+..+.+..|+.++|.|.+.+.+ .+.+.|++.. ..+ .....++...... ....|
T Consensus 37 ~~~~~~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~-~~~~L 115 (254)
T 2c1o_A 37 RELVMTQSPLTLSVTIGQPASISCKSSQSLLYSNGKTYLNWLLQRPGQSPKRLIYLVSKLDSGDPDRFTGSGSG-TDFTL 115 (254)
T ss_dssp -CCCEEEECSEEEECTTSCEEEEEEESSCCBCSSSCBCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEET-TEEEE
T ss_pred eceeEEeCCceEEecCCCcEEEEeeccCcccccCCCCceEEEEeCCCCCceEEEEeccccCCCccceEEEecCC-CEEEE
Confidence 356666667778899999999999998877 3789999742 211 1112455443311 33459
Q ss_pred EEccCCCCCCCeEEEEEeeeCCC
Q psy2442 71 RIEPVRHARDDAVYECVAENGVG 93 (111)
Q Consensus 71 ~~~~~~~~~d~g~y~c~~~~~~~ 93 (111)
.|.++.. .|.|.|.|.+.|..+
T Consensus 116 ~I~~v~~-~D~G~Y~C~a~n~~~ 137 (254)
T 2c1o_A 116 KISRVEA-EDLGIYYCVQGSHFP 137 (254)
T ss_dssp EESSCCG-GGCSEEEEEECSSSS
T ss_pred EECcCCc-ccCEEEEEEEEcCcc
Confidence 9999998 999999999988754
No 209
>3juy_B 3B3 single chain variant HIV-1 antibody; envelope protein GP120, broadly neutralizing antibody, 3B3 single chain variable fragment, immune system; 2.50A {Homo sapiens}
Probab=99.26 E-value=2.6e-10 Score=64.66 Aligned_cols=82 Identities=20% Similarity=0.290 Sum_probs=57.3
Q ss_pred CCeeEEcCcceeeecCCcEEEEEEEeccCC-CeEEEEEC--Ceecc-----------CCCCceEEEeCCCCCeEEEEccC
Q psy2442 10 PPEITLRPRNQAVKAGGITSFYCIARGDPI-PVIQWRKN--GKRVS-----------GTQSRYMVQEFPPGGSLLRIEPV 75 (111)
Q Consensus 10 ~p~~~~~~~~~~~~~g~~~~l~c~~~~~~~-~~~~w~~~--~~~~~-----------~~~~~~~~~~~~~~~~~l~~~~~ 75 (111)
++.+...+..+.+..|++++|.|.+.+.+. +.+.|++. +..+. ....++...... ....|.|.++
T Consensus 149 ~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~-~~~~L~I~~v 227 (256)
T 3juy_B 149 EIVLTQAPGTLSLSPGERATFSCRSSHSIRSRRVAWYQHKPGQAPRLVIHGVSNRASGISDRFSGSGSG-TDFTLTITRV 227 (256)
T ss_dssp CCCEEEECSEEEECTTSCEEEEEEESSCCTTCCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEET-TEEEEEESSC
T ss_pred eeEEEecCCeEEEeCCCCEEEEEEECCCcCCeeEEEEEECCCCCcEEEEEecCccCCccCCcEEEEccC-CEEEEEECCC
Confidence 345566677778899999999999988775 79999983 22211 012344433211 3345999999
Q ss_pred CCCCCCeEEEEEeeeCCC
Q psy2442 76 RHARDDAVYECVAENGVG 93 (111)
Q Consensus 76 ~~~~d~g~y~c~~~~~~~ 93 (111)
.. .|+|.|.|.+.|...
T Consensus 228 ~~-~DsG~Y~C~~~~~~~ 244 (256)
T 3juy_B 228 EP-EDFALYYCQVYGASS 244 (256)
T ss_dssp CG-GGCSEEEEEECCSSC
T ss_pred CH-hHCEEEEEEEeeCCC
Confidence 98 999999999988543
No 210
>1ugn_A LIR1, leukocyte immunoglobulin-like receptor 1; immunoglobulin-like folds, immune system; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 3d2u_D* 1g0x_A 1p7q_D 1ufu_A 1vdg_A 2gw5_A 2dyp_D 2otp_A 3q2c_A
Probab=99.26 E-value=1.2e-11 Score=67.71 Aligned_cols=92 Identities=13% Similarity=0.169 Sum_probs=63.2
Q ss_pred CCCeeEEcCcceeeecCCcEEEEEEEeccCCCeEEEEECCeeccCCCCceEEEeCCCCCeEEEEccCCCCCCCeEEEEEe
Q psy2442 9 DPPEITLRPRNQAVKAGGITSFYCIARGDPIPVIQWRKNGKRVSGTQSRYMVQEFPPGGSLLRIEPVRHARDDAVYECVA 88 (111)
Q Consensus 9 ~~p~~~~~~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~g~y~c~~ 88 (111)
.+|.+...+.. .+..|++++|.|.+.+.+. .+.|++++..+........... ....|.|.++.. .|+|.|.|.+
T Consensus 4 ~~P~i~~~p~~-~v~~G~~v~L~C~~~~~~~-~~~W~k~g~~~~~~~~~~~~~~---~~~~L~i~~v~~-~D~G~Y~C~a 77 (198)
T 1ugn_A 4 PKPTLWAEPGS-VITQGSPVTLRCQGGQETQ-EYRLYREKKTAPWITRIPQELV---KKGQFPIPSITW-EHTGRYRCYY 77 (198)
T ss_dssp CCCEEEEESCS-EEETTCCEEEEEECCTTCC-CEEEEESSSCCHHHHTSCHHHH---TTTEEEESSCCG-GGCEEEEEEE
T ss_pred CCCeEeccCCC-cccCCCcEEEEEEecCCCc-EEEEEECCccccccccccccCC---cccEEEECCCCH-HHCeEEEEEE
Confidence 46777666654 7889999999999988765 7999999876631100000000 334589999998 9999999999
Q ss_pred eeCC-Cc-eEeeEEEEEEec
Q psy2442 89 ENGV-GD-AVSAEASLTVYE 106 (111)
Q Consensus 89 ~~~~-~~-~~~~~~~l~~~~ 106 (111)
.|.. |. ..+..+.|.|.+
T Consensus 78 ~n~~~g~~~~s~~~~l~V~~ 97 (198)
T 1ugn_A 78 GSDTAGRSESSDPLELVVTG 97 (198)
T ss_dssp EETTTEECCCCCCEEEEEEC
T ss_pred ECCCCCcccCCccEEEEEcc
Confidence 9976 41 124456666665
No 211
>2e27_L Anti-ciguatoxin antibody, light chain; immunoglobulin fold, immune system; HET: AB0; 1.70A {Mus musculus} PDB: 3iy1_A
Probab=99.26 E-value=1.6e-10 Score=58.78 Aligned_cols=78 Identities=23% Similarity=0.374 Sum_probs=55.6
Q ss_pred eeEEcCcceeeecCCcEEEEEEEeccCCCeEEEEECC--ee---c-c-------CCCCceEEEeCCCCCeEEEEccCCCC
Q psy2442 12 EITLRPRNQAVKAGGITSFYCIARGDPIPVIQWRKNG--KR---V-S-------GTQSRYMVQEFPPGGSLLRIEPVRHA 78 (111)
Q Consensus 12 ~~~~~~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~~--~~---~-~-------~~~~~~~~~~~~~~~~~l~~~~~~~~ 78 (111)
.+.+.+..+.+.+|++++|.|...+.+.+.+.|++.. .. + . ....++...... ....|.|.+++.
T Consensus 5 ~v~q~p~~v~v~~G~~vtL~C~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~R~~~~~~~-~~~~L~I~~v~~- 82 (119)
T 2e27_L 5 QMTQSPSSLSASLGGKVTITCKANQDIKKKIAWYQHKPGKGPRLLIYYTSTLKSGISSRFSGSGSG-RDYSFSISNLEP- 82 (119)
T ss_dssp CEEEECSEEEEETTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEET-TEEEEEECSCCG-
T ss_pred eeEecCCeEEEeCCCCEEEEEEeCCCCCceEEEEEECCCCCCEEEEEECCccCCCCCCcEEEEccC-CEEEEEECCCCh-
Confidence 3455666778999999999999988777789999852 11 1 0 112455543211 334599999998
Q ss_pred CCCeEEEEEeeeC
Q psy2442 79 RDDAVYECVAENG 91 (111)
Q Consensus 79 ~d~g~y~c~~~~~ 91 (111)
+|+|.|.|.+.+.
T Consensus 83 ~DsG~Y~C~~~~~ 95 (119)
T 2e27_L 83 EDAATYYCLQYDN 95 (119)
T ss_dssp GGCEEEEEEECGG
T ss_pred HHCEEEEEEEccC
Confidence 9999999998874
No 212
>1hng_A CD2; T lymphocyte adhesion glycoprotein; 2.80A {Rattus rattus} SCOP: b.1.1.1 b.1.1.3
Probab=99.26 E-value=5.9e-11 Score=64.05 Aligned_cols=86 Identities=15% Similarity=0.195 Sum_probs=60.0
Q ss_pred eeeecCCcEEEEEEEec--cCCCeEEEEECCeecc---------CCCCceEEEeCCCCCeEEEEccCCCCCCCeEEEEEe
Q psy2442 20 QAVKAGGITSFYCIARG--DPIPVIQWRKNGKRVS---------GTQSRYMVQEFPPGGSLLRIEPVRHARDDAVYECVA 88 (111)
Q Consensus 20 ~~~~~g~~~~l~c~~~~--~~~~~~~w~~~~~~~~---------~~~~~~~~~~~~~~~~~l~~~~~~~~~d~g~y~c~~ 88 (111)
+.+..|+.+.|.|...+ .+.+.+.|++++..+. ....++.+. ....|.|.++.. .|+|.|.|.+
T Consensus 6 v~~~~G~~v~L~c~~~~~~~~~~~i~W~k~~~~i~~~~~~~~~~~~~~r~~~~----~~gsL~I~~v~~-~D~G~Y~C~~ 80 (176)
T 1hng_A 6 VWGALGHGINLNIPNFQMTDDIDEVRWERGSTLVAEFKRKMKPFLKSGAFEIL----ANGDLKIKNLTR-DDSGTYNVTV 80 (176)
T ss_dssp EEEETTSCEEECCTTCCCCTTEEEEEEEETTEEEEEEETTSCCEESSTTEEEC----TTSCEEESSCCG-GGCEEEEEEE
T ss_pred EEEEcCCcEEEcCCCCCcccccccEEEEeCCceeEEEcCCCeecCCCCeEEEC----CCCcEEEccccc-ccCEEEEEEE
Confidence 56778999999995333 4455899999986432 112455442 222399999998 9999999999
Q ss_pred eeCCCce-EeeEEEEEEecCCCC
Q psy2442 89 ENGVGDA-VSAEASLTVYEGEEK 110 (111)
Q Consensus 89 ~~~~~~~-~~~~~~l~~~~~~~~ 110 (111)
.|..|.. ....+.|.|..++..
T Consensus 81 ~n~~g~~~~~~~~~l~V~~~~~~ 103 (176)
T 1hng_A 81 YSTNGTRILNKALDLRILEMVSK 103 (176)
T ss_dssp EETTCCEEEEEEEEEEEECCCCC
T ss_pred EeCCCCEEEEEEEEEEEeCCCCC
Confidence 9988763 255667777665543
No 213
>3dmk_A DOWN syndrome cell adhesion molecule (dscam) ISOF 1.30.30, N-terminal eight IG domains...; immunoglobulin domain; HET: NAG NDG; 4.19A {Drosophila melanogaster}
Probab=99.25 E-value=6.1e-10 Score=71.99 Aligned_cols=97 Identities=33% Similarity=0.605 Sum_probs=72.6
Q ss_pred CCCeeEEcCcceeeecCCcEEEEEEEeccCCCeEEEEECCeeccCCCCceEEEe---CC-CCCeEEEEccCCCCCCCeEE
Q psy2442 9 DPPEITLRPRNQAVKAGGITSFYCIARGDPIPVIQWRKNGKRVSGTQSRYMVQE---FP-PGGSLLRIEPVRHARDDAVY 84 (111)
Q Consensus 9 ~~p~~~~~~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~---~~-~~~~~l~~~~~~~~~d~g~y 84 (111)
.+|.+...+....+..|+.+.|.|.+.+.|.+.+.|++++..+... .++.... .+ .....|.+..+.. .|.|.|
T Consensus 428 ~~p~i~~~~~~~~v~~G~~v~L~C~~~g~p~p~v~W~~~g~~l~~~-~~~~~~~~~~~~~~~~~~L~i~~v~~-~d~G~Y 505 (816)
T 3dmk_A 428 DPPVIRQAFQEETMEPGPSVFLKCVAGGNPTPEISWELDGKKIANN-DRYQVGQYVTVNGDVVSYLNITSVHA-NDGGLY 505 (816)
T ss_dssp CCCEEEEECCCEEECSSSCEEEEEEEECSSCCEEEEEETTEECCSC-TTEEEEEEECTTSCEEEEEEESSCCT-TTCEEE
T ss_pred CCCceEecCcceEEcCCCCEEEEEEEecCCCCEEEEEECCEECCCC-CCcccccEEecCCCcEEEEEEeeccc-cCCEEE
Confidence 5677766666667889999999999999999999999999988643 3333211 11 0123488999998 999999
Q ss_pred EEEeeeCCCceEeeEEEEEEecCC
Q psy2442 85 ECVAENGVGDAVSAEASLTVYEGE 108 (111)
Q Consensus 85 ~c~~~~~~~~~~~~~~~l~~~~~~ 108 (111)
.|.+.|..|.. .....+.+..+|
T Consensus 506 ~C~a~n~~g~~-~~~~~l~V~~~p 528 (816)
T 3dmk_A 506 KCIAKSKVGVA-EHSAKLNVYGLP 528 (816)
T ss_dssp EEEEEETTEEE-EEEEEEEECSSC
T ss_pred EEEEEECCCeE-EEEEEEEEecCC
Confidence 99999998864 667777776554
No 214
>3bkj_L WO2 IGG2A FAB fragment light chain kappa; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} PDB: 3bkc_L 3bkm_L 2zuq_B* 1h3p_L
Probab=99.25 E-value=2.9e-10 Score=64.38 Aligned_cols=82 Identities=23% Similarity=0.271 Sum_probs=57.5
Q ss_pred CCeeEEcCcceeeecCCcEEEEEEEeccC-----CCeEEEEECCe--ec-----------cCCCCceEEEeCCCCCeEEE
Q psy2442 10 PPEITLRPRNQAVKAGGITSFYCIARGDP-----IPVIQWRKNGK--RV-----------SGTQSRYMVQEFPPGGSLLR 71 (111)
Q Consensus 10 ~p~~~~~~~~~~~~~g~~~~l~c~~~~~~-----~~~~~w~~~~~--~~-----------~~~~~~~~~~~~~~~~~~l~ 71 (111)
.+.+...+..+.+..|++++|.|...+.+ .+.+.|++.+. .+ .....++...... ....|.
T Consensus 34 ~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~-~~~~L~ 112 (252)
T 3bkj_L 34 DVLMTQTPLSLPVNLGEQASISCRSSQSIVHSNGHTYLEWYLQRPGQSPKLLIYQVSTRFSGVPDRFSGSGSG-TDFTLR 112 (252)
T ss_dssp CCCEEEECSEEEECTTSCEEEEEEESSCCBCTTSCBCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEET-TEEEEE
T ss_pred ccEEEeCCceEEEeCCCcEEEEEEcCCCccccCCCCcEEEEEECCCCCcEEEEEcCCcccCCcCCceEEEccC-CEEEEE
Confidence 34455556777889999999999998876 57899998541 11 0112455443211 334599
Q ss_pred EccCCCCCCCeEEEEEeeeCCC
Q psy2442 72 IEPVRHARDDAVYECVAENGVG 93 (111)
Q Consensus 72 ~~~~~~~~d~g~y~c~~~~~~~ 93 (111)
|.++.. .|+|.|.|.+.|..+
T Consensus 113 I~~v~~-~D~G~Y~C~~~~~~~ 133 (252)
T 3bkj_L 113 ISRVEA-EDLGVYYCFQASLVP 133 (252)
T ss_dssp ESSCCG-GGCEEEEEEECSBSS
T ss_pred ECCCCc-ccCEEEEEEEEcCCc
Confidence 999998 999999999988654
No 215
>2q20_A VK1 O18/O8 germline light chain variable domain; Al, light chain amyloidosis, amyloid, immunoglobulin, protein fibril; 1.30A {Homo sapiens} PDB: 2kqm_A 3cdf_A 3cdc_A 2kqn_A 3cdy_A 2q1e_A 3dvi_A 1igm_L 1bww_A 1b0w_A 1bre_A 1qp1_A 3dvf_A 1rei_A 1wtl_A 1ar2_A 1fgv_L 2bx5_A 2uzi_L* 1bvk_A ...
Probab=99.25 E-value=1.5e-10 Score=57.83 Aligned_cols=78 Identities=21% Similarity=0.332 Sum_probs=55.6
Q ss_pred eeEEcCcceeeecCCcEEEEEEEeccCCCeEEEEECC--ee---cc--------CCCCceEEEeCCCCCeEEEEccCCCC
Q psy2442 12 EITLRPRNQAVKAGGITSFYCIARGDPIPVIQWRKNG--KR---VS--------GTQSRYMVQEFPPGGSLLRIEPVRHA 78 (111)
Q Consensus 12 ~~~~~~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~~--~~---~~--------~~~~~~~~~~~~~~~~~l~~~~~~~~ 78 (111)
.+.+.+..+.+.+|++++|.|...+.+.+.+.|++.. .. +. ....|+...... ....|.|.+++.
T Consensus 5 ~v~q~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~R~~~~~~~-~~~~L~I~~v~~- 82 (109)
T 2q20_A 5 QMTQSPSSLSASVGDRVTITCQASQDISNYLNWYQQKPGKAPKLLIYDASNLETGVPSRFSGSGSG-TDFTFTISSLQP- 82 (109)
T ss_dssp CEEEECSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEET-TEEEEEESSCCG-
T ss_pred cEEeeCCEEEecCCCcEEEEEeeccCCCCcEEEEEECCCCCCEEEEEEcCccCCCCCCcEEEeccC-CEEEEEECCCCh-
Confidence 4455566678999999999999988777789999853 11 10 112455543211 334599999998
Q ss_pred CCCeEEEEEeeeC
Q psy2442 79 RDDAVYECVAENG 91 (111)
Q Consensus 79 ~d~g~y~c~~~~~ 91 (111)
+|+|.|.|.+.+.
T Consensus 83 ~DsG~Y~C~~~~~ 95 (109)
T 2q20_A 83 EDIATYYCQQYDN 95 (109)
T ss_dssp GGCEEEEEEECSS
T ss_pred hhCEEEEEEEeeC
Confidence 9999999998874
No 216
>1oll_A NK receptor; immune system/receptor, NK cell triggering receptor, immune system, IG domain, cytotoxicity, C2-type IG-like domains; 1.93A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.25 E-value=6.2e-11 Score=64.45 Aligned_cols=91 Identities=18% Similarity=0.095 Sum_probs=60.4
Q ss_pred CCeeEEcCcceeeecCCcEEEEEEEeccCCCeEEEEECCeeccCCCCceEEEeCCCCCeEEEEccCCCCCCCeEEEEEee
Q psy2442 10 PPEITLRPRNQAVKAGGITSFYCIARGDPIPVIQWRKNGKRVSGTQSRYMVQEFPPGGSLLRIEPVRHARDDAVYECVAE 89 (111)
Q Consensus 10 ~p~~~~~~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~g~y~c~~~ 89 (111)
+|.+...+.. .+..|++++|.|.+.+. .+.+.|++++..+........ .......|.|.++.. .|+|.|.|.+.
T Consensus 4 ~P~i~~~p~~-~v~~G~~v~L~C~~~~~-~~~~~w~k~g~~~~~~~~~~~---~~~~~~~L~I~~v~~-~D~G~Y~C~~~ 77 (188)
T 1oll_A 4 KPFIWAEPHF-MVPKEKQVTICCQGNYG-AVEYQLHFEGSLFAVDRPKPP---ERINKVKFYIPDMNS-RMAGQYSCIYR 77 (188)
T ss_dssp CCEEEEESCS-EEETTCCEEEEEECCTT-CCEEEEEETTEEEEEECCSSC---TTCCEEEEEESSCCG-GGCEEEEEEEE
T ss_pred CCEEEeecCC-cCCCCCCEEEEEecCCC-CCEEEEEECCCcccccccccC---CCcceeEEEeCcCCc-ccCeEEEEEec
Confidence 5666666665 78899999999998653 458899999876531100000 001335589999998 99999999998
Q ss_pred eCCCce-EeeEEEEEEec
Q psy2442 90 NGVGDA-VSAEASLTVYE 106 (111)
Q Consensus 90 ~~~~~~-~~~~~~l~~~~ 106 (111)
|..+.. .+..+.|.|.+
T Consensus 78 ~~~~~~~~s~~~~l~V~~ 95 (188)
T 1oll_A 78 VGELWSEPSNLLDLVVTE 95 (188)
T ss_dssp ETTEECCCCCCEEEEEES
T ss_pred CCCCCCCCCCceEEEecc
Confidence 764321 13445555553
No 217
>2v9r_A Roundabout homolog 1; proto-oncogene, differentiation, phosphorylation, disease MU neuronal development, immunoglobulin domain, chemotaxis; 2.00A {Homo sapiens} PDB: 2v9q_A
Probab=99.25 E-value=4.5e-11 Score=65.67 Aligned_cols=94 Identities=37% Similarity=0.580 Sum_probs=63.8
Q ss_pred CCCeeEEcCcceeeecCCcEEEEEEEeccCCCeEEEEECCeeccCCCC---ceEEEeCCCCCeE----EEEccCCCCCCC
Q psy2442 9 DPPEITLRPRNQAVKAGGITSFYCIARGDPIPVIQWRKNGKRVSGTQS---RYMVQEFPPGGSL----LRIEPVRHARDD 81 (111)
Q Consensus 9 ~~p~~~~~~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~~~~~~~~~~---~~~~~~~~~~~~~----l~~~~~~~~~d~ 81 (111)
.+|.+...+..+.+..|+.+.|.|.+.+.|.+.+.|++++..+..... ....... .... +.+.++.. .|.
T Consensus 8 ~pp~i~~~p~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~i~~~~~-~d~ 84 (212)
T 2v9r_A 8 FPPRIVEHPSDLIVSKGEPATLNCKAEGRPTPTIEWYKGGERVETDKDDPRSHRMLLP--SGSLFFLRIVHGRKSR-PDE 84 (212)
T ss_dssp EEEEEEECCCCEEECTTCCEEECCEEEEESCCEEEEEETTEECCCTTTCTTCSEEECT--TSCEEESSCCCCSSCC-CSC
T ss_pred CCcceecCCCceEEeCCCcEEEEEEcCCCCCCEEEEEECCEEeeccccccccceEEec--CCcEEEEEEEecCCCc-ccC
Confidence 366777778888899999999999999988899999999988753211 1111111 1111 22345577 899
Q ss_pred eEEEEEeeeCCCceEeeEEEEEEe
Q psy2442 82 AVYECVAENGVGDAVSAEASLTVY 105 (111)
Q Consensus 82 g~y~c~~~~~~~~~~~~~~~l~~~ 105 (111)
|.|.|.+.|..|........+.+.
T Consensus 85 G~Y~C~~~n~~g~~~~~~~~l~V~ 108 (212)
T 2v9r_A 85 GVYVCVARNYLGEAVSHDASLEVA 108 (212)
T ss_dssp EEEEEEEEETTEEEECCCEEEEEC
T ss_pred eEEEEEEECCCCceeecceEEEEE
Confidence 999999999876432334455543
No 218
>1uct_A Immunoglobulin alpha FC receptor; beta stands, immune system; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1ovz_A* 1ow0_C*
Probab=99.25 E-value=1.1e-10 Score=64.98 Aligned_cols=96 Identities=15% Similarity=0.174 Sum_probs=64.7
Q ss_pred eEEecC---CCeeEEcCcceeeecCCcEEEEEEEeccCCCeEEEEECCeeccCCCCceEEEeCCCCCeEEEEccCCCCCC
Q psy2442 4 KVRFLD---PPEITLRPRNQAVKAGGITSFYCIARGDPIPVIQWRKNGKRVSGTQSRYMVQEFPPGGSLLRIEPVRHARD 80 (111)
Q Consensus 4 ~l~v~~---~p~~~~~~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d 80 (111)
.|.|.. +|.+...+ ...+..|+.++|.|...+.+.+.+.|+++|..+... . ... . ....|.|.++.. .|
T Consensus 97 ~l~V~~~~~~P~i~~~p-~~~v~~G~~v~L~C~~~~~~~~~~~W~k~g~~~~~~--~-~~~--~-~~~~L~I~~v~~-~D 168 (218)
T 1uct_A 97 ELVVTGLYGKPFLSADR-GLVLMPGENISLTCSSAHIPFDRFSLAKEGELSLPQ--H-QSG--E-HPANFSLGPVDL-NV 168 (218)
T ss_dssp EEEEECSSCCCEEEESS-CSEECTTCCCEEEEECSSSCCSEEEEEETTCSSCCS--E-EEC--S-SSEEEECCSCCG-GG
T ss_pred EEEEcCcccCCEEEeCC-CCccCCCCCEEEEEeCCCCCCCEEEEEECCCccccc--c-cCC--C-ccCEEEEccCCc-cc
Confidence 455543 45555445 346789999999997667677789999998866431 1 111 1 445699999998 99
Q ss_pred CeEEEEEeeeCCC----ceEeeEEEEEEecC
Q psy2442 81 DAVYECVAENGVG----DAVSAEASLTVYEG 107 (111)
Q Consensus 81 ~g~y~c~~~~~~~----~~~~~~~~l~~~~~ 107 (111)
+|.|.|.+.|... ...+..+.|.|.+.
T Consensus 169 ~G~Y~C~a~n~~~~~~~s~~S~~~~l~V~g~ 199 (218)
T 1uct_A 169 SGIYRCYGWYNRSPYLWSFPSNALELVVTDS 199 (218)
T ss_dssp CEEEEEEEECTTSTTEECCCCCCEEEEEC--
T ss_pred CEEEEEEEEcCCCCCcCCCCCCcEEEEEecC
Confidence 9999999987531 12345666766654
No 219
>3r4d_A CEA-related cell adhesion molecule 1, isoform 1/2; immunoglobulin, beta-sandwich, mceacam1A - immunoglobulin FO spike NTD - galectin-like beta-sandwich fold; HET: NAG; 3.10A {Mus musculus} PDB: 1l6z_A*
Probab=99.24 E-value=2.6e-10 Score=62.55 Aligned_cols=87 Identities=11% Similarity=0.092 Sum_probs=61.0
Q ss_pred ceeeecCCcEEEEEEEeccCCCeEEEEECCeeccC------------------CCCceEEEeCCCCCeEEEEccCCCCCC
Q psy2442 19 NQAVKAGGITSFYCIARGDPIPVIQWRKNGKRVSG------------------TQSRYMVQEFPPGGSLLRIEPVRHARD 80 (111)
Q Consensus 19 ~~~~~~g~~~~l~c~~~~~~~~~~~w~~~~~~~~~------------------~~~~~~~~~~~~~~~~l~~~~~~~~~d 80 (111)
...+..|+.+.|.|...+.+.+.+.|++++..... ...++... ....|.|.++.. .|
T Consensus 8 ~~~v~~G~~v~L~C~~~~~~~~~v~W~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~r~~~~----~~~~L~i~~v~~-~D 82 (208)
T 3r4d_A 8 PPQVAEDNNVLLLVHNLPLALGAFAWYKGNTTAIDKEIARFVPNSNMNFTGQAYSGREIIY----SNGSLLFQMITM-KD 82 (208)
T ss_dssp SSEEETTCCEEEEEECCCSSCSEEEEEESSCCCGGGEEEEEEGGGTEEEECTTCCSSEEEC----TTSCEEECSCCG-GG
T ss_pred cceeecCCcEEEEEeCCCCCceEEEeccCCCCCccceEEEEecCCCccccCccccceeEEe----cCCeEEEccccc-cC
Confidence 35788999999999987878889999987542211 11233222 123489999998 99
Q ss_pred CeEEEEEeeeCCCceEeeEEEEEEecCCCC
Q psy2442 81 DAVYECVAENGVGDAVSAEASLTVYEGEEK 110 (111)
Q Consensus 81 ~g~y~c~~~~~~~~~~~~~~~l~~~~~~~~ 110 (111)
+|.|.|.+.+..+......+.+.|..++..
T Consensus 83 ~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~ 112 (208)
T 3r4d_A 83 MGVYTLDMTDENYRRTQATVRFHVHQPVTQ 112 (208)
T ss_dssp CEEEEEEEECSSCEEEEEEEEEEEECCCCC
T ss_pred CeEEEEEEEcccCceeEEEEEEEeccCCCC
Confidence 999999999975433466677777666543
No 220
>3dmk_A DOWN syndrome cell adhesion molecule (dscam) ISOF 1.30.30, N-terminal eight IG domains...; immunoglobulin domain; HET: NAG NDG; 4.19A {Drosophila melanogaster}
Probab=99.24 E-value=1e-10 Score=75.50 Aligned_cols=88 Identities=32% Similarity=0.593 Sum_probs=68.4
Q ss_pred eeEEecCCCeeEEcCcceeeecCCcEEEEEEEeccCCCeEEEEECCeeccCCCCceEEEeCCCCCeEEEEccCCCCCCCe
Q psy2442 3 RKVRFLDPPEITLRPRNQAVKAGGITSFYCIARGDPIPVIQWRKNGKRVSGTQSRYMVQEFPPGGSLLRIEPVRHARDDA 82 (111)
Q Consensus 3 ~~l~v~~~p~~~~~~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~g 82 (111)
+.|.|..++.+...+....+..|+.+.|.|.+.+.|.+.+.|++++..+.. ....|.|.++.. .|.|
T Consensus 336 ~~l~V~~~~~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~v~W~k~g~~~~~------------~~~~L~i~~v~~-~d~G 402 (816)
T 3dmk_A 336 TVLTVTAPLSAKIDPPTQTVDFGRPAVFTCQYTGNPIKTVSWMKDGKAIGH------------SESVLRIESVKK-EDKG 402 (816)
T ss_dssp EEEEECEEEEEEEESSEEECCTTSCEEEEEEEEEECCCEEEEEETTEECSC------------CSSEEEESSCCG-GGCE
T ss_pred EEEEEcCCCceeeCCCceEecCCCCEEEEEEEeccCCCEEEEEECCEECCC------------CCCEEEEcCCCH-HHCE
Confidence 346666666666666667888999999999999999999999999988753 223488899998 9999
Q ss_pred EEEEEeeeCCCceEeeEEEEEE
Q psy2442 83 VYECVAENGVGDAVSAEASLTV 104 (111)
Q Consensus 83 ~y~c~~~~~~~~~~~~~~~l~~ 104 (111)
.|.|.+.|..+.. .....+.+
T Consensus 403 ~Y~C~a~n~~g~~-~~~~~l~v 423 (816)
T 3dmk_A 403 MYQCFVRNDRESA-EASAELKL 423 (816)
T ss_dssp EEEEEEECSSCEE-EECCEEEC
T ss_pred EEEEEEECCCCcE-EEEEEEEE
Confidence 9999999987753 44444444
No 221
>1z7z_I Intercellular adhesion molecule-1; ICAM-1,kilifi,CD54,human coxsackievirus A21, cryo-electron microscopy,virus-receptor complex, icosahedral virus; HET: NAG NDG; 8.00A {Homo sapiens} SCOP: b.1.1.3 b.1.1.3 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.24 E-value=1.1e-11 Score=75.27 Aligned_cols=87 Identities=24% Similarity=0.383 Sum_probs=65.4
Q ss_pred eeEEecCCCeeEEcC--cceeeecCCcEEEEEEEeccCCCeEEEEECCeeccCCCCceEEEeCCCCCeEEEEccCCCCCC
Q psy2442 3 RKVRFLDPPEITLRP--RNQAVKAGGITSFYCIARGDPIPVIQWRKNGKRVSGTQSRYMVQEFPPGGSLLRIEPVRHARD 80 (111)
Q Consensus 3 ~~l~v~~~p~~~~~~--~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d 80 (111)
+.|.|..+|.+.... ....+..|+.+.|.|.+.|.|.|.+.|++++..+.. ....+ .+.. .|
T Consensus 361 ~~l~V~~~P~~~~~~~p~~~~~~~g~~~~l~C~~~g~P~p~i~W~~~g~~~~~------------~g~~~---~v~~-~d 424 (450)
T 1z7z_I 361 RELRVLYGPRLDERDCPGNWTWPENSQQTPMCQAWGNPLPELKCLKDGTFPLP------------IGESV---TVTR-DL 424 (450)
T ss_dssp EECEEEEEEECCSTTSCSEEEEETTCEECCCCCCEEESCCEEEEEETTTEECC------------TTSCE---ECCG-GG
T ss_pred EEEEEecCCceeeccCCCceeEcCCCeEEEEEecccCCCCcEEEEECCcccCC------------CCCeE---eEeh-hh
Confidence 355666677665443 456788999999999999999999999999874322 11112 4666 89
Q ss_pred CeEEEEEeeeCCCceEeeEEEEEEec
Q psy2442 81 DAVYECVAENGVGDAVSAEASLTVYE 106 (111)
Q Consensus 81 ~g~y~c~~~~~~~~~~~~~~~l~~~~ 106 (111)
+|.|.|.+.|..|.. ...+.|.|..
T Consensus 425 ~G~Y~C~a~N~~G~~-~~~~~l~V~~ 449 (450)
T 1z7z_I 425 EGTYLCRARSTQGEV-TREVTVNVLS 449 (450)
T ss_dssp CEEEEEEEEETTEEE-EEEEEEEEEC
T ss_pred CeEEEEEEEeCCCce-eEEEEEEEEc
Confidence 999999999999875 7788887764
No 222
>1fnl_A Low affinity immunoglobulin gamma FC region receptor III-B; beta sandwich, immunoglobulin-like, immune system receptor; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1e4j_A 1e4k_C* 1t83_C* 1t89_C* 3ay4_C*
Probab=99.24 E-value=1.5e-10 Score=62.26 Aligned_cols=73 Identities=21% Similarity=0.265 Sum_probs=58.4
Q ss_pred cCCCeeEEcCcceeeecCCcEEEEEEEeccCCCe-EEEEECCeeccCCCCceEEEeCCCCCeEEEEccCCCCCCCeEEEE
Q psy2442 8 LDPPEITLRPRNQAVKAGGITSFYCIARGDPIPV-IQWRKNGKRVSGTQSRYMVQEFPPGGSLLRIEPVRHARDDAVYEC 86 (111)
Q Consensus 8 ~~~p~~~~~~~~~~~~~g~~~~l~c~~~~~~~~~-~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~g~y~c 86 (111)
..+|.+...+....+..|+.+.|.|...+.+.+. +.|++++..+.. ....|.|.++.. .|.|.|.|
T Consensus 5 ~~~p~i~~~p~~~~v~~G~~v~L~C~~~~~p~~~~~~W~~~~~~~~~------------~~~~L~i~~~~~-~d~G~Y~C 71 (175)
T 1fnl_A 5 LPKAVVFLEPQWYSVLEKDSVTLKCQGAYSPEDNSTQWFHNESLISS------------QASSYFIDAATV-NDSGEYRC 71 (175)
T ss_dssp CCCCEEEEESCCSEEETTCCEEEEEECCCBTTBCCCEEEETTEEEES------------SCSEEEESSCCG-GGCEEEEE
T ss_pred CCCCEEEEcCCceeeeCCCcEEEEeeCCCCCCCcceEEEECCEEccC------------CceEEEEeCCCc-ccCEEEEE
Confidence 3467777777777889999999999998887665 789999887643 233488999998 99999999
Q ss_pred EeeeCCC
Q psy2442 87 VAENGVG 93 (111)
Q Consensus 87 ~~~~~~~ 93 (111)
.+.|..+
T Consensus 72 ~~~n~~~ 78 (175)
T 1fnl_A 72 QTNLSTL 78 (175)
T ss_dssp ECSSSCC
T ss_pred EeeCCcc
Confidence 9988544
No 223
>2oz4_A Intercellular adhesion molecule 1; IGSF domain, structural plasticity, cell-surface dimerizatio adhesion; HET: NAG FUC; 2.70A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 b.1.1.4 PDB: 1p53_A*
Probab=99.24 E-value=6.2e-12 Score=71.60 Aligned_cols=86 Identities=24% Similarity=0.387 Sum_probs=63.1
Q ss_pred eEEecCCCeeEEc--CcceeeecCCcEEEEEEEeccCCCeEEEEECCeeccCCCCceEEEeCCCCCeEEEEccCCCCCCC
Q psy2442 4 KVRFLDPPEITLR--PRNQAVKAGGITSFYCIARGDPIPVIQWRKNGKRVSGTQSRYMVQEFPPGGSLLRIEPVRHARDD 81 (111)
Q Consensus 4 ~l~v~~~p~~~~~--~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~ 81 (111)
.|.|..+|.+... +....+..|+.+.|.|.+.+.|.+.+.|++++..... ... + ..+.. .|+
T Consensus 177 ~l~V~~~p~~~~~~~p~~~~v~~g~~~~l~C~~~g~P~p~i~W~~~~~~~~~------------~g~-~--~~v~~-~d~ 240 (265)
T 2oz4_A 177 ELRVLYGPRLDERDCPGNWTWPENSQQTPMCQAWGNPLPELKCLKDGTFPLP------------IGE-S--VTVTR-DLE 240 (265)
T ss_dssp EEEEEEEEECCGGGSCSEEEEETTCEECCCCCCEEESCCEEEEEETTTEECC------------TTS-C--EECCG-GGC
T ss_pred EEEEEeCCccccccCCCccEEcCCCeEEEEeECccCCCCeEEEEECCcccCC------------CCc-E--EEeeh-hhC
Confidence 4666666665433 3355788899999999999999999999998873211 111 1 13666 899
Q ss_pred eEEEEEeeeCCCceEeeEEEEEEec
Q psy2442 82 AVYECVAENGVGDAVSAEASLTVYE 106 (111)
Q Consensus 82 g~y~c~~~~~~~~~~~~~~~l~~~~ 106 (111)
|.|.|.+.|..|.. ...+.|.|.+
T Consensus 241 G~Y~C~a~N~~G~~-~~~~~l~V~~ 264 (265)
T 2oz4_A 241 GTYLCRARSTQGEV-TREVTVNVLS 264 (265)
T ss_dssp EEEEEEEEETTEEE-EEEEEEEEEC
T ss_pred eEEEEEEECCCCcE-EEEEEEEEec
Confidence 99999999998874 7777777764
No 224
>4ffy_L DENV1-E111 single chain variable fragment (light; viral envelope proteins, structural genomics, antibody epito flavivirus, niaid; 2.50A {Mus musculus}
Probab=99.23 E-value=1.9e-10 Score=58.98 Aligned_cols=94 Identities=22% Similarity=0.309 Sum_probs=60.7
Q ss_pred eeEEcCcceeeecCCcEEEEEEEeccC----CCeEEEEECC--eecc-----------CCCCceEEEeCCCCCeEEEEcc
Q psy2442 12 EITLRPRNQAVKAGGITSFYCIARGDP----IPVIQWRKNG--KRVS-----------GTQSRYMVQEFPPGGSLLRIEP 74 (111)
Q Consensus 12 ~~~~~~~~~~~~~g~~~~l~c~~~~~~----~~~~~w~~~~--~~~~-----------~~~~~~~~~~~~~~~~~l~~~~ 74 (111)
.+.+.+..+.+.+|++++|.|...+.+ ...+.|++.. ..+. ....++...... ....|.|.+
T Consensus 3 ~v~q~p~~v~v~~G~~v~L~C~~~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~-~~~sL~I~~ 81 (126)
T 4ffy_L 3 VLTQSPASLAVSLGQRATISCRASESVDHYGNSFIYWYQQKPGQPPKLLIYLASNLESGVPARFSGSGSE-TDFTLTIDS 81 (126)
T ss_dssp CEEEECSEEEEETTSCEEEEEEESSCCEETTEECEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEET-TEEEEEESS
T ss_pred cEEeCCCeEEEeCCCCEEEEEecCCCcccCCCceEEEEEECCCCCCEEEEEEcCccCCCCCCcEEEecCC-CEEEEEECC
Confidence 345566678899999999999988765 4578999842 1110 112355443211 334599999
Q ss_pred CCCCCCCeEEEEEeeeCCCceEeeEEEEEEecC
Q psy2442 75 VRHARDDAVYECVAENGVGDAVSAEASLTVYEG 107 (111)
Q Consensus 75 ~~~~~d~g~y~c~~~~~~~~~~~~~~~l~~~~~ 107 (111)
++. +|+|.|.|.+.+...........|.|...
T Consensus 82 v~~-~DsG~Y~C~~~~~~~~~fg~gT~L~V~~~ 113 (126)
T 4ffy_L 82 VET-DDAATYYCQQNNEDPYTFGGGTKLEIKGG 113 (126)
T ss_dssp CCG-GGCEEEEEEECSSSSCEECCCEEEEEEC-
T ss_pred CCH-HHCEEEEEEEecCCCcEECCCEEEEEecC
Confidence 998 99999999998754322233445555543
No 225
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.22 E-value=2.5e-10 Score=67.95 Aligned_cols=82 Identities=17% Similarity=0.220 Sum_probs=62.7
Q ss_pred CcceeeecCCcEEEEEEEeccCCCeEEEEECCeeccCC---CCceEEEeCCCCCeEEEEccCCCCCCCeEEEEEeeeCCC
Q psy2442 17 PRNQAVKAGGITSFYCIARGDPIPVIQWRKNGKRVSGT---QSRYMVQEFPPGGSLLRIEPVRHARDDAVYECVAENGVG 93 (111)
Q Consensus 17 ~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~~~~~~~~---~~~~~~~~~~~~~~~l~~~~~~~~~d~g~y~c~~~~~~~ 93 (111)
+..+.+..|+++.+.|.+.+ |.+.+.|++.+...... ..++.. . . ..|.|.++.. .|+|.|.|.+.|..|
T Consensus 253 ~~~v~v~~G~~~~l~C~~~g-p~p~i~W~~~~~~~~~~~~~~~r~~~-~---~-~~L~I~~v~~-~D~G~Y~C~a~N~~g 325 (361)
T 2xot_A 253 ESAWEAHLGDTLTIRCDTKQ-QGMTKVWVSPSNEQVLSQGSNGSVSV-R---N-GDLFFKKVQV-EDGGVYTCYAMGETF 325 (361)
T ss_dssp CCCCEEETTCCEEECCCCSS-TTCEEEEECTTSCBCCSCCSSSSEEE-E---T-TEEEESSCCT-TSCEEEEEEEECSSC
T ss_pred ccCceecCCCeEEEEeEeeC-CCCeEEEEeCCCeeEeecccCCceEe-e---c-CeEEEeecCc-ccCEEEEEEEecCCC
Confidence 34567889999999999998 88899999976654321 124444 2 2 3499999998 999999999999988
Q ss_pred ceEeeEEEEEEec
Q psy2442 94 DAVSAEASLTVYE 106 (111)
Q Consensus 94 ~~~~~~~~l~~~~ 106 (111)
.. +..+.+.|..
T Consensus 326 ~~-~~~~~l~V~~ 337 (361)
T 2xot_A 326 NE-TLSVELKVYN 337 (361)
T ss_dssp EE-EEEEEEEEES
T ss_pred cc-EEEEEEEEEe
Confidence 64 7777777754
No 226
>2ocw_A Polymeric-immunoglobulin receptor; SC, secretory, antibody, immunity, immune system; NMR {Homo sapiens} PDB: 3chn_S 3cm9_S 3chn_J 3cm9_J
Probab=99.22 E-value=2.9e-10 Score=70.98 Aligned_cols=103 Identities=15% Similarity=0.093 Sum_probs=73.7
Q ss_pred eeEEecCCCeeEEcCcceeeecCCcEEEEEEEeccC-CCeEEEEECCeeccC------------CCCceEEEeCC--CCC
Q psy2442 3 RKVRFLDPPEITLRPRNQAVKAGGITSFYCIARGDP-IPVIQWRKNGKRVSG------------TQSRYMVQEFP--PGG 67 (111)
Q Consensus 3 ~~l~v~~~p~~~~~~~~~~~~~g~~~~l~c~~~~~~-~~~~~w~~~~~~~~~------------~~~~~~~~~~~--~~~ 67 (111)
++|.|..+|.+...+....+..|+.+.|.|.+.+.+ .+.+.|++++..... ...++.+.... ...
T Consensus 105 ~~l~V~~~p~~~~~~~~~~v~~G~~v~l~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ 184 (585)
T 2ocw_A 105 VSLEVSQGPGLLNDTKVYTVDLGRTVTINCPFKTENAQKRKSLYKQIGLYPVLVIDSSGYVNPNYTGRIRLDIQGTGQLL 184 (585)
T ss_pred EEEEEecCccccCCCccEEEEcCCCEEEEEEecCCCCCccEEEEECCCCCceEEecCCcccCccccCcEEEEeccCCCcE
Confidence 567888888887777778899999999999998654 457999998754210 01333333211 011
Q ss_pred eEEEEccCCCCCCCeEEEEEeeeCCCceEeeEEEEEEecC
Q psy2442 68 SLLRIEPVRHARDDAVYECVAENGVGDAVSAEASLTVYEG 107 (111)
Q Consensus 68 ~~l~~~~~~~~~d~g~y~c~~~~~~~~~~~~~~~l~~~~~ 107 (111)
..|.|.++.. .|.|.|.|.+.|..+.. ...+.|.|..+
T Consensus 185 ~~L~I~~v~~-~D~G~Y~C~a~n~~g~~-~~~~~l~V~~~ 222 (585)
T 2ocw_A 185 FSVVINQLRL-SDAGQYLCQAGDDSNSN-KKNADLQVLKP 222 (585)
T ss_pred EEEEEccCCh-hHCeEEEEEeccCCccc-cceEEEEEccC
Confidence 2589999998 99999999999988764 66777777653
No 227
>3ejj_X Macrophage colony-stimulating factor 1 receptor; growth factor-receptor complex, receptor tyrosine kinase, CY 4-helix bundle, ATP-binding; HET: NAG; 2.40A {Mus musculus} PDB: 4exp_X*
Probab=99.22 E-value=3.9e-10 Score=64.68 Aligned_cols=97 Identities=16% Similarity=0.226 Sum_probs=67.5
Q ss_pred eeEEecCCCe-eEEcCcceeeecCCcEEEEEEEeccCCCe-EEEEE-CCeeccCCCCceEEEeCCCCCeEEEEccCCCCC
Q psy2442 3 RKVRFLDPPE-ITLRPRNQAVKAGGITSFYCIARGDPIPV-IQWRK-NGKRVSGTQSRYMVQEFPPGGSLLRIEPVRHAR 79 (111)
Q Consensus 3 ~~l~v~~~p~-~~~~~~~~~~~~g~~~~l~c~~~~~~~~~-~~w~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 79 (111)
..|.|..++. +...+....+..|+.+.|.|.+.+.+.+. +.|++ ++..+.. ..++... ....|.+.++.. .
T Consensus 81 ~~l~V~~~~~~~~~~~~~~~v~~g~~v~L~C~~~~~~~~~~v~W~~~~~~~~~~-~~~~~~~----~~~~L~i~~v~~-~ 154 (289)
T 3ejj_X 81 IHLYVKDPAHSWNLLAQEVTVVEGQEAVLPCLITDPALKDSVSLMREGGRQVLR-KTVYFFS----PWRGFIIRKAKV-L 154 (289)
T ss_dssp EEEEECCSSCSEEESCSEEEEETTSCEEECEEESCGGGGGSEEEEEGGGEECCT-TCCEEEE----TTTEEEESSCCG-G
T ss_pred EEEEEeCCCcceecccceEEEecCCceEeEEEccCCCcceEEEEEecCCeecCC-CccEEEC----CCCCEEEeeccc-c
Confidence 4566776665 45556667888999999999998877664 99986 4554432 2444443 334589999998 9
Q ss_pred CCeEEEEEeeeCCCceEeeEEEEEEe
Q psy2442 80 DDAVYECVAENGVGDAVSAEASLTVY 105 (111)
Q Consensus 80 d~g~y~c~~~~~~~~~~~~~~~l~~~ 105 (111)
|.|.|.|.+.+.........+.+.|.
T Consensus 155 d~G~Y~C~a~~~~~~~~~~~~~l~V~ 180 (289)
T 3ejj_X 155 DSNTYVCKTMVNGRESTSTGIWLKVN 180 (289)
T ss_dssp GCEEEEEEEEETTEEEECCCEEEEEE
T ss_pred cCEEEEEEEEeCCCccccccEEEEEE
Confidence 99999999985432223556666665
No 228
>3esu_F Antibody 14B7* light chain and antibody 14B7* heavy chain linked with A synthetic...; single-chain FV, monoclonal antibody, immunoglobulin; 1.30A {Mus musculus} PDB: 3et9_F 3esv_F 3etb_F 1h8n_A 1h8s_A* 1h8o_A*
Probab=99.22 E-value=5.7e-10 Score=62.95 Aligned_cols=80 Identities=19% Similarity=0.241 Sum_probs=56.9
Q ss_pred eeEEcCcceeeecCCcEEEEEEEeccCCCeEEEEECCe-----e--------ccCCCCceEEEeCCCCCeEEEEccCCCC
Q psy2442 12 EITLRPRNQAVKAGGITSFYCIARGDPIPVIQWRKNGK-----R--------VSGTQSRYMVQEFPPGGSLLRIEPVRHA 78 (111)
Q Consensus 12 ~~~~~~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~~~-----~--------~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 78 (111)
.+...+..+.+.+|+.++|.|...+.+.+.+.|++... . ......++...... ....|.|.++..
T Consensus 6 ~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~i~W~k~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~-~~~~L~I~~v~~- 83 (250)
T 3esu_F 6 VLIQSTSSLSASLGDRVTISCRASQDIRNYLNWYQQKPDGTVKLLIYYTSRLQSGVPSRFSGSGSG-TDYSLTISNLEQ- 83 (250)
T ss_dssp CEECSCSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEET-TEEEEEESSCCG-
T ss_pred eEEecCCEEEeeCCCcEEEEEEecccCCceEEEEEECCCCCCEEEEEEeCCCCCCCCCCEEEeCCC-CEEEEEEccCCh-
Confidence 34455666788899999999999999888999998431 0 01112444333211 334599999998
Q ss_pred CCCeEEEEEeeeCCC
Q psy2442 79 RDDAVYECVAENGVG 93 (111)
Q Consensus 79 ~d~g~y~c~~~~~~~ 93 (111)
.|+|.|.|.+.|..+
T Consensus 84 ~D~G~Y~C~~~n~~~ 98 (250)
T 3esu_F 84 EDIGTYFCQQGNTLP 98 (250)
T ss_dssp GGCEEEEEEECSSSS
T ss_pred hhCEEEEEEEeeCCC
Confidence 999999999988654
No 229
>3o4o_C Interleukin-1 receptor type 2; cytokine-receptor complex, beta-trefoil, IG-like fold, immun; HET: NAG; 3.30A {Homo sapiens}
Probab=99.22 E-value=3.4e-11 Score=70.59 Aligned_cols=93 Identities=18% Similarity=0.254 Sum_probs=71.1
Q ss_pred CCCeeEEcCcceeeecCCcEEEEEEEe-------ccCCCeEEEEECCeec--cCC-CCceEEEeCCCCCeEEEEccCCCC
Q psy2442 9 DPPEITLRPRNQAVKAGGITSFYCIAR-------GDPIPVIQWRKNGKRV--SGT-QSRYMVQEFPPGGSLLRIEPVRHA 78 (111)
Q Consensus 9 ~~p~~~~~~~~~~~~~g~~~~l~c~~~-------~~~~~~~~w~~~~~~~--~~~-~~~~~~~~~~~~~~~l~~~~~~~~ 78 (111)
..|.+...+....+.+|+.+.|.|.+. +.+.+.+.|++++..+ ... ..++.. ....|.|.++..
T Consensus 17 ~~p~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~~-----~~~~L~i~~v~~- 90 (339)
T 3o4o_C 17 SCRFRGRHYKREFRLEGEPVALRCPQVPYWLWASVSPRINLTWHKNDSARTVPGEEETRMWA-----QDGALWLLPALQ- 90 (339)
T ss_dssp -CEEEEECSCCEEEETTBCCEEECTTSCSSCCSTTSSCCBCCCEESSCCSCCSCCSSSCEEE-----ETTEEEESSBCT-
T ss_pred hhHhhCcCceEEEEECCccEEEEeccccccccccCCCCceEEEEECCCCcccCccccccEEe-----eCCeEEECCCCc-
Confidence 456777778888999999999999987 8888899999998874 222 223332 233599999998
Q ss_pred CCCeEEEEEeeeCCCceEeeEEEEEEecCC
Q psy2442 79 RDDAVYECVAENGVGDAVSAEASLTVYEGE 108 (111)
Q Consensus 79 ~d~g~y~c~~~~~~~~~~~~~~~l~~~~~~ 108 (111)
.|.|.|.|.+.|..|.. ...+.|.|...+
T Consensus 91 ~D~G~Y~C~~~n~~g~~-~~~~~l~V~~~~ 119 (339)
T 3o4o_C 91 EDSGTYVCTTRNASYCD-KMSIELRVFENT 119 (339)
T ss_dssp TCCEEEECCEEETTEEE-EEEEEEEEECSC
T ss_pred ccCEEEEEEEECCcceE-EEEEEEEEEcCC
Confidence 99999999999987753 667777776554
No 230
>1f2q_A High affinity immunoglobulin epsilon receptor ALP subunit; immunoglobulin fold, glycoprotein, IGE-binding Pro immune system; HET: NAG MAN; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1j86_A* 1rpq_A* 2y7q_A* 1f6a_A* 1j88_A* 1j89_A* 1j87_A*
Probab=99.22 E-value=6.9e-11 Score=63.55 Aligned_cols=74 Identities=19% Similarity=0.293 Sum_probs=56.4
Q ss_pred cCCCeeEEcCcceeeecCCcEEEEEEEeccCCC-eEEEEECCeeccCCCCceEEEeCCCCCeEEEEccCCCCCCCeEEEE
Q psy2442 8 LDPPEITLRPRNQAVKAGGITSFYCIARGDPIP-VIQWRKNGKRVSGTQSRYMVQEFPPGGSLLRIEPVRHARDDAVYEC 86 (111)
Q Consensus 8 ~~~p~~~~~~~~~~~~~g~~~~l~c~~~~~~~~-~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~g~y~c 86 (111)
..+|.+...+....+..|+.+.|.|...+.+.+ .+.|++++..+.. ....|.|.++.. .|.|.|.|
T Consensus 2 ~~~P~i~~~p~~~~v~~G~~v~L~C~~~~~~~~~~i~W~~~~~~~~~------------~~~~L~i~~v~~-~d~G~Y~C 68 (176)
T 1f2q_A 2 PQKPKVSLNPPWNRIFKGENVTLTCNGNNFFEVSSTKWFHNGSLSEE------------TNSSLNIVNAKF-EDSGEYKC 68 (176)
T ss_dssp --CCCCEEESSCSEEETTCCEEEECCTTCC----CCEEEETTEECSC------------CSSEEEECSCCG-GGCEEEEE
T ss_pred CCCCEEEcCCCCcceecCCcEEEEEeCCCCCCcceEEEEECCeECCC------------CceEEEEeccce-ecCEEEEE
Confidence 346777777777789999999999999887775 6899999887653 234488899998 99999999
Q ss_pred EeeeCCCc
Q psy2442 87 VAENGVGD 94 (111)
Q Consensus 87 ~~~~~~~~ 94 (111)
.+.|..+.
T Consensus 69 ~~~~~~~s 76 (176)
T 1f2q_A 69 QHQQVNES 76 (176)
T ss_dssp ECTTSSCC
T ss_pred EcCCcccc
Confidence 99886543
No 231
>3udw_C Poliovirus receptor; PVR tigit IGSF signal transduction immunology, IGSF, cell SU receptor signalling, glycosylation, membrane protein; HET: NAG; 2.90A {Homo sapiens}
Probab=99.22 E-value=2.9e-10 Score=57.22 Aligned_cols=90 Identities=19% Similarity=0.276 Sum_probs=57.8
Q ss_pred CcceeeecCCcEEEEEEEe-ccCCC----eEEEEECCeecc------------CCCCceEEEeCC--CC--CeEEEEccC
Q psy2442 17 PRNQAVKAGGITSFYCIAR-GDPIP----VIQWRKNGKRVS------------GTQSRYMVQEFP--PG--GSLLRIEPV 75 (111)
Q Consensus 17 ~~~~~~~~g~~~~l~c~~~-~~~~~----~~~w~~~~~~~~------------~~~~~~~~~~~~--~~--~~~l~~~~~ 75 (111)
+..+.+..|++++|.|... +.+.+ .+.|++.+.... ....++.+.... .. ...|.|.++
T Consensus 7 p~~v~~~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~sL~I~~v 86 (118)
T 3udw_C 7 PTQVPGFLGDSVTLPCYLQVPNMEVTHVSQLTWARHGESGSMAVFHQTQGPSYSESKRLEFVAARLGAELRNASLRMFGL 86 (118)
T ss_dssp CSEEEEETTSCEEECCEEECCTTCCCEEEEEEEEETTCSBCSEEEETTTEEEETTCSSEEETTCCTTSCCCBCCEEECSC
T ss_pred CCeEEEeeCCcEEEEEEeECCCCCCCceEEEEEEEcCCCceEEEEeCCCCCccCCcCcEEEecccccCCCCCcEEEEeec
Confidence 3336788999999999984 44433 389999743210 002333332211 00 345999999
Q ss_pred CCCCCCeEEEEEeee-CCCceEeeEEEEEEecCC
Q psy2442 76 RHARDDAVYECVAEN-GVGDAVSAEASLTVYEGE 108 (111)
Q Consensus 76 ~~~~d~g~y~c~~~~-~~~~~~~~~~~l~~~~~~ 108 (111)
.. .|+|.|.|.+.+ ..+. ......|.|..+|
T Consensus 87 ~~-~D~G~Y~C~v~~~~~~~-~~~~~~L~V~~~P 118 (118)
T 3udw_C 87 RV-EDEGNYTCLFVTFPQGS-RSVDIWLRVLAKP 118 (118)
T ss_dssp CG-GGCEEEEEEEEEETTEE-EEEEEEEEEEC--
T ss_pred Ch-HHCeEEEEEEEECCCCC-ccceEEEEEEeCC
Confidence 98 999999999988 5554 3667778777654
No 232
>1cs6_A Axonin-1; neural cell adhesion, cell adhesion; 1.80A {Gallus gallus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4 PDB: 2om5_A
Probab=99.22 E-value=8.8e-11 Score=69.83 Aligned_cols=90 Identities=31% Similarity=0.472 Sum_probs=64.3
Q ss_pred CCeeEEcCcceee---ecCCcEEEEEEEeccCCCeEEEEECCeeccCC-CCceEEEeCCCCCeEEEEccCC-CCCCCeEE
Q psy2442 10 PPEITLRPRNQAV---KAGGITSFYCIARGDPIPVIQWRKNGKRVSGT-QSRYMVQEFPPGGSLLRIEPVR-HARDDAVY 84 (111)
Q Consensus 10 ~p~~~~~~~~~~~---~~g~~~~l~c~~~~~~~~~~~w~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~-~~~d~g~y 84 (111)
+|.+...+....+ ..|+.+.|.|.+.+.|.+.+.|+++|..+... ..++... . ..|.+.++. . .|+|.|
T Consensus 4 ~P~~~~~p~~~~~~~~~~g~~v~l~C~~~g~p~~~v~W~k~g~~~~~~~~~~~~~~----~-~~L~i~~~~~~-~D~G~Y 77 (382)
T 1cs6_A 4 GPVFEEQPAHTLFPEGSAEEKVTLTCRARANPPATYRWKMNGTELKMGPDSRYRLV----A-GDLVISNPVKA-KDAGSY 77 (382)
T ss_dssp EEEEEECCCCEEEETTCSCCEEEECCEEEEESCCEEEEEETTEECCCSTTSSEEEE----T-TEEEEESCCHH-HHCEEE
T ss_pred CCEEEECCCcEEEecCCCCCcEEEEEEecCCCCCEEEEEECCEECCcCCCccEEee----C-CeEEEeccccc-ccCEEE
Confidence 5677777766555 68999999999999998999999999987543 2344432 2 247777765 3 799999
Q ss_pred EEEeeeCCCceEeeEEEEEEe
Q psy2442 85 ECVAENGVGDAVSAEASLTVY 105 (111)
Q Consensus 85 ~c~~~~~~~~~~~~~~~l~~~ 105 (111)
.|.+.|..|...+....+.+.
T Consensus 78 ~C~a~n~~g~~~s~~~~l~v~ 98 (382)
T 1cs6_A 78 QCVATNARGTVVSREASLRFG 98 (382)
T ss_dssp EEEEEETTEEEECCCEEEEEE
T ss_pred EEEEEcCCcEEEecceEEEee
Confidence 999999876532333444443
No 233
>1p6f_A NKP46, natural cytotoxicity triggering receptor 1; natural cytotoxicity receptor, NK cell receptor, immunoglobulin fold, immune system; 2.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.21 E-value=2e-10 Score=65.01 Aligned_cols=98 Identities=17% Similarity=0.245 Sum_probs=63.9
Q ss_pred eEEecC---CCeeEEcCcceeeecCCcEEEEEEEeccCCCeEEEEECCeeccCCCCceEEEeCCCCCeEEEEccCCCCCC
Q psy2442 4 KVRFLD---PPEITLRPRNQAVKAGGITSFYCIARGDPIPVIQWRKNGKRVSGTQSRYMVQEFPPGGSLLRIEPVRHARD 80 (111)
Q Consensus 4 ~l~v~~---~p~~~~~~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d 80 (111)
.|.|.. +|.+...+. ..+..|++++|.|.+.+. .+.+.|+++|..+.. .... .. ....|.|.++.. .|
T Consensus 93 ~L~V~~~~~~P~i~~~p~-~~v~~G~~vtL~C~~~~~-~~~~~w~k~g~~~~~---~~~~--~~-~~~~l~I~~v~~-~d 163 (242)
T 1p6f_A 93 DLVVTEMYDTPTLSVHPG-PEVISGEKVTFYCRLDTA-TSMFLLLKEGRSSHV---QRGY--GK-VQAEFPLGPVTT-AH 163 (242)
T ss_dssp EEEEECCSCCCEEEEESC-SEEETTCEEEEEEECTTS-CSEEEEEECSSSCEE---EEEE--CS-SEEEEEEEECCG-GG
T ss_pred EEEeecccCCCceEccCC-CccCCCCcEEEEEecCCC-CCEEEEEECCCccCc---cccC--CC-ceEEEEeCCCcc-cc
Confidence 455543 566654443 467899999999998764 458999999876532 1111 11 345599999998 99
Q ss_pred CeEEEEEeeeCC--CceEeeEEEEEEecCCCC
Q psy2442 81 DAVYECVAENGV--GDAVSAEASLTVYEGEEK 110 (111)
Q Consensus 81 ~g~y~c~~~~~~--~~~~~~~~~l~~~~~~~~ 110 (111)
+|.|.|.+.|.. ....+..+.|.|.+.+..
T Consensus 164 ~G~Y~C~a~n~~~~~s~~S~~~~l~V~~~~~~ 195 (242)
T 1p6f_A 164 RGTYRCFGSYNNHAWSFPSEPVKLLVTGDIEN 195 (242)
T ss_dssp CEEEEEEEEEETTEECCCCCCEEEEEEC----
T ss_pred CEEEEEEEECCCCcccCCCCCEEEEEeccCCC
Confidence 999999998753 122356677777765443
No 234
>2qsq_A Carcinoembryonic antigen-related cell adhesion MO; glycoprotein, GPI-anchor, immunoglobulin DOMA lipoprotein, membrane; 1.95A {Homo sapiens} PDB: 2qst_A 2ver_N* 2gk2_A
Probab=99.21 E-value=5.2e-10 Score=56.20 Aligned_cols=82 Identities=15% Similarity=0.115 Sum_probs=56.3
Q ss_pred eeeecCCcEEEEEEEeccCCCeEEEEECCeecc------------------CCCCceEEEeCCCCCeEEEEccCCCCCCC
Q psy2442 20 QAVKAGGITSFYCIARGDPIPVIQWRKNGKRVS------------------GTQSRYMVQEFPPGGSLLRIEPVRHARDD 81 (111)
Q Consensus 20 ~~~~~g~~~~l~c~~~~~~~~~~~w~~~~~~~~------------------~~~~~~~~~~~~~~~~~l~~~~~~~~~d~ 81 (111)
..+..|+++.|.|.........+.|+++..... ....|..+. ....|.|.++.. +|.
T Consensus 10 ~~~~~G~~v~L~~~~~p~~~~~i~W~kg~~~~~~~~I~~y~~~~~~~~~~~~~~gR~~~~----~ngSL~I~nvt~-~D~ 84 (111)
T 2qsq_A 10 FNVAEGKEVLLLVHNLPQHLFGYSWYKGERVDGNRQIIGYVIGTQQATPGPAYSGREIIY----PNASLLIQNIIQ-NDA 84 (111)
T ss_dssp SEEETTSCEEEEEESCCSSEEEEEEEESSSCCGGGEEEEEETTTTEEEECTTCCSCEEEC----TTSCEEECSCCG-GGC
T ss_pred ceeccCCCEEEEEeCCCCCceEEEEEeCCCCCCCcEEEEEECCCcceecCcccCCcEEEe----cCCcEEEccCcc-cCC
Confidence 467899999999985444444689998753210 112454443 233499999998 999
Q ss_pred eEEEEEeeeCCCceEeeEEEEEEec
Q psy2442 82 AVYECVAENGVGDAVSAEASLTVYE 106 (111)
Q Consensus 82 g~y~c~~~~~~~~~~~~~~~l~~~~ 106 (111)
|.|.|.+.+..+......+.|.|..
T Consensus 85 G~Ytc~v~~~~~~~~~~~~~L~V~~ 109 (111)
T 2qsq_A 85 GFYTLHVIKSDLVNEEATGQFRVYP 109 (111)
T ss_dssp EEEEEEEEETTSCCEEEEEEEEEEC
T ss_pred eEEEEEEEeCCCcEEEEEEEEEEec
Confidence 9999999987553235666776654
No 235
>1eaj_A Coxsackie virus and adenovirus receptor; virus/viral protein receptor, immunoglobulin V domain fold, symmetric dimer; 1.35A {Homo sapiens} SCOP: b.1.1.1 PDB: 1f5w_A 2j12_B 2j1k_A 2wbw_B* 2w9l_A* 1rsf_A 1jew_R 1kac_B 1p69_B 1p6a_B
Probab=99.21 E-value=1e-10 Score=59.41 Aligned_cols=90 Identities=16% Similarity=0.218 Sum_probs=59.4
Q ss_pred EcCcceeeecCCcEEEEEEEeccCC----CeEEEEECCe-------ec-------------cCCCCceEEEeC--CCCCe
Q psy2442 15 LRPRNQAVKAGGITSFYCIARGDPI----PVIQWRKNGK-------RV-------------SGTQSRYMVQEF--PPGGS 68 (111)
Q Consensus 15 ~~~~~~~~~~g~~~~l~c~~~~~~~----~~~~w~~~~~-------~~-------------~~~~~~~~~~~~--~~~~~ 68 (111)
..+..+.+..|++++|.|...+.+. +.+.|++.+. .+ .....++..... .....
T Consensus 10 ~~~~~v~~~~G~~v~L~C~~~~~~~~~~~~~v~W~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~ 89 (126)
T 1eaj_A 10 TPEEMIEKAKGETAYLPCKFTLSPEDQGPLDIEWLISPADNQKVDQVIILYSGDKIYDDYYPDLKGRVHFTSNDLKSGDA 89 (126)
T ss_dssp SSEEEEEEETTSCEEECCBEECCTTCCSCEEEEEEEEETTSSCCSEEEEEEETTEEECTTSSTTTTTEEECCSCGGGTBC
T ss_pred CCCceEEEEeCCCEEEEEEEecCCCCCCceEEEEEEeCCCcCCCceEEEEEeCCeeccccCccccCeeEEEcccccCCeE
Confidence 3444567889999999999876554 3489987642 11 011234443321 00124
Q ss_pred EEEEccCCCCCCCeEEEEEeeeCCCceEeeEEEEEEec
Q psy2442 69 LLRIEPVRHARDDAVYECVAENGVGDAVSAEASLTVYE 106 (111)
Q Consensus 69 ~l~~~~~~~~~d~g~y~c~~~~~~~~~~~~~~~l~~~~ 106 (111)
.|.|.+++. .|+|.|.|.+.+..+.. ...+.|.|..
T Consensus 90 sL~I~~v~~-~D~G~Y~C~v~~~~~~~-~~~~~L~V~~ 125 (126)
T 1eaj_A 90 SINVTNLQL-SDIGTYQCKVKKAPGVA-NKKIHLVVLV 125 (126)
T ss_dssp CEEECSCCG-GGCEEEEEEEEETTEEE-EEEEEEEEEC
T ss_pred EEEECcCCh-HHCeEEEEEEEcCCccC-CcEEEEEEEc
Confidence 499999998 99999999999976653 6677777654
No 236
>3nfj_J T cell receptor beta chain; immunoglobulin family, immune system; 2.68A {Homo sapiens} PDB: 3hg1_E
Probab=99.21 E-value=9.5e-10 Score=61.92 Aligned_cols=77 Identities=17% Similarity=0.271 Sum_probs=55.1
Q ss_pred eEEcCcceeeecCCcEEEEEEEeccCCCeEEEEECC--eec-------------cCCCCceEEEeCCCCCeEEEEccCCC
Q psy2442 13 ITLRPRNQAVKAGGITSFYCIARGDPIPVIQWRKNG--KRV-------------SGTQSRYMVQEFPPGGSLLRIEPVRH 77 (111)
Q Consensus 13 ~~~~~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~~--~~~-------------~~~~~~~~~~~~~~~~~~l~~~~~~~ 77 (111)
+...+..+.+..|++++|.|...+.+.+.+.|++.. ... .....|+...........|.|.++..
T Consensus 4 v~~~p~~v~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~I~~v~~ 83 (245)
T 3nfj_J 4 IHQWPATLVQPVGSPLSLECTVEGTSNPNLYWYRQAAGRGLQLLFYSVGIGQISSEVPQNLSASRPQDRQFILSSKKLLL 83 (245)
T ss_dssp EEEECSEEEEETTCCEEEEEEEESCSSCEEEEEEESTTSCEEEEEEESSTTCCBCSSCCSSEEEEEETTEEEEEESSCCG
T ss_pred eeCCCceEEecCCCCEEEEEEecCCCCceEEEEEECCCCCcEEEEEECCCcccCCccCCcEEEEecCCCEEEEEECCCCh
Confidence 445666788999999999999998888899999821 110 01113444432111334599999998
Q ss_pred CCCCeEEEEEeee
Q psy2442 78 ARDDAVYECVAEN 90 (111)
Q Consensus 78 ~~d~g~y~c~~~~ 90 (111)
.|+|.|.|.+.+
T Consensus 84 -~D~G~Y~C~~~~ 95 (245)
T 3nfj_J 84 -SDSGFYLCAWSV 95 (245)
T ss_dssp -GGCEEEEEEEEC
T ss_pred -hhCEEEEEEEee
Confidence 999999999988
No 237
>1qfw_M FV, antibody (anti beta subunit) (light chain); glycoprotein hormone; HET: NAG; 3.50A {Mus musculus} SCOP: b.1.1.1
Probab=99.21 E-value=2.1e-10 Score=57.23 Aligned_cols=77 Identities=19% Similarity=0.330 Sum_probs=53.9
Q ss_pred eEEcCcceeeecCCcEEEEEEEeccCCCeEEEEECCe-----ec-c-------CCCCceEEEeCCCCCeEEEEccCCCCC
Q psy2442 13 ITLRPRNQAVKAGGITSFYCIARGDPIPVIQWRKNGK-----RV-S-------GTQSRYMVQEFPPGGSLLRIEPVRHAR 79 (111)
Q Consensus 13 ~~~~~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~~~-----~~-~-------~~~~~~~~~~~~~~~~~l~~~~~~~~~ 79 (111)
+.+.+..+.+.+|++++|.|...+.+.+.+.|++... .+ . ....|+.... ......|.|.++.. +
T Consensus 4 v~q~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~-~~~~~~L~I~~v~~-~ 81 (108)
T 1qfw_M 4 LTQSPKSMSMSVGERVTLSCKASETVDSFVSWYQQKPEQSPKLLIFGASNRFSGVPDRFTGSG-SATDFTLTISSVQA-E 81 (108)
T ss_dssp EEEECSCEECCTTCCEEEEEEESSCCCSCEEEEEECTTSCCEEEECSSSCBCTTCCTTEECCB-CSSEEEEEESSCCT-T
T ss_pred EEEeCCeEEEcCCCCEEEEeeeCCCCCcEEEEEEECCCCCCEEEEEEcCccCCCCCCcEEEEc-CCCEEEEEECCCCh-h
Confidence 3455666788999999999999877767899998531 11 0 0123444322 11234599999998 9
Q ss_pred CCeEEEEEeeeC
Q psy2442 80 DDAVYECVAENG 91 (111)
Q Consensus 80 d~g~y~c~~~~~ 91 (111)
|+|.|.|.+.+.
T Consensus 82 DsG~Y~C~~~~~ 93 (108)
T 1qfw_M 82 DFADYHCGQTYN 93 (108)
T ss_dssp CCSEEEEEECSS
T ss_pred hCEEEEEEEccC
Confidence 999999999874
No 238
>1oll_A NK receptor; immune system/receptor, NK cell triggering receptor, immune system, IG domain, cytotoxicity, C2-type IG-like domains; 1.93A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.21 E-value=2.4e-10 Score=62.14 Aligned_cols=93 Identities=17% Similarity=0.278 Sum_probs=61.9
Q ss_pred eEEecC---CCeeEEcCcceeeecCCcEEEEEEEeccCCCeEEEEECCeeccCCCCceEEEeCCCCCeEEEEccCCCCCC
Q psy2442 4 KVRFLD---PPEITLRPRNQAVKAGGITSFYCIARGDPIPVIQWRKNGKRVSGTQSRYMVQEFPPGGSLLRIEPVRHARD 80 (111)
Q Consensus 4 ~l~v~~---~p~~~~~~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d 80 (111)
.|.|.. +|.+...+. ..+..|+.++|.|.+.+. .+.+.|++++..+.. ..... .....|.|.++.. .|
T Consensus 90 ~l~V~~~~~~p~i~~~p~-~~v~~G~~v~L~C~~~~~-~~~~~w~k~g~~~~~---~~~~~---~~~~~L~I~~v~~-~d 160 (188)
T 1oll_A 90 DLVVTEMYDTPTLSVHPG-PEVISGEKVTFYCRLDTA-TSMFLLLKEGRSSHV---QRGYG---KVQAEFPLGPVTT-AH 160 (188)
T ss_dssp EEEEESCSCCCEEEEESC-SEEETTCEEEEEEECSSS-CSEEEEEEESSSCEE---EEEEC---SSEEEEEEEECCG-GG
T ss_pred EEEecccCCCCeEEECCC-CccccCCEEEEEEEcCCC-CCEEEEEECCccccc---cccCC---CceeEEEECCCCc-CC
Confidence 455543 566654443 467899999999997664 468999998765532 11111 1345699999998 99
Q ss_pred CeEEEEEeeeCCC--ceEeeEEEEEEe
Q psy2442 81 DAVYECVAENGVG--DAVSAEASLTVY 105 (111)
Q Consensus 81 ~g~y~c~~~~~~~--~~~~~~~~l~~~ 105 (111)
+|.|.|.+.|... ...+..+.|.|.
T Consensus 161 ~G~Y~C~a~n~~~~~s~~S~~~~l~V~ 187 (188)
T 1oll_A 161 RGTYRCFGSYNNHAWSFPSEPVKLLVT 187 (188)
T ss_dssp CEEEEEECEEETTEECCCCCCEEEEEE
T ss_pred CcEEEEEEEcCCCcCCCCCCcEEEEec
Confidence 9999999987531 223456666654
No 239
>3rjd_A High affinity immunoglobulin gamma FC receptor I; immune system; HET: NAG MAN FUC P33; 2.65A {Homo sapiens}
Probab=99.21 E-value=4.7e-10 Score=63.44 Aligned_cols=72 Identities=22% Similarity=0.258 Sum_probs=59.0
Q ss_pred CCeeEEcCcceeeecCCcEEEEEEEeccCCC-eEEEEECCeeccCCCCceEEEeCCCCCeEEEEccCCCCCCCeEEEEEe
Q psy2442 10 PPEITLRPRNQAVKAGGITSFYCIARGDPIP-VIQWRKNGKRVSGTQSRYMVQEFPPGGSLLRIEPVRHARDDAVYECVA 88 (111)
Q Consensus 10 ~p~~~~~~~~~~~~~g~~~~l~c~~~~~~~~-~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~g~y~c~~ 88 (111)
.|.+...+....+..|+.+.|.|.+.+.+.+ .+.|++++..+... ...|.|.++.. .|.|.|.|.+
T Consensus 1 kP~i~~~p~~~~v~~G~~v~l~C~~~~~~~~~~~~W~~~g~~~~~~------------~~~l~i~~~~~-~d~G~Y~C~~ 67 (262)
T 3rjd_A 1 KAVITLQPPWVSVFQEETVTLHCEVLHLPGSSSTQWFLNGTATQTS------------TPSYRITSASV-NDSGEYRCQR 67 (262)
T ss_dssp CCEEEESSCCSEEETTCCEEEEEECSSCCCTTCEEEEETTEECSCC------------SSEEEESSCCG-GGCEEEEEEE
T ss_pred CCeEecCCCcEEeeCCCeEEEEEECCCCCCCceEEEEECCEEeecc------------CCeEEEecCCc-ccCeEEEEEE
Confidence 3667777777789999999999999888877 89999998887532 23378889988 9999999999
Q ss_pred eeCCCc
Q psy2442 89 ENGVGD 94 (111)
Q Consensus 89 ~~~~~~ 94 (111)
.|..+.
T Consensus 68 ~~~~~s 73 (262)
T 3rjd_A 68 GLSGRS 73 (262)
T ss_dssp SSSCCC
T ss_pred ecCCcc
Confidence 886543
No 240
>2vsd_A CHIR AB1; immune system receptor, FC receptor; HET: NAG NDG MAN; 1.82A {Gallus gallus}
Probab=99.21 E-value=1.9e-11 Score=60.83 Aligned_cols=89 Identities=16% Similarity=0.220 Sum_probs=59.5
Q ss_pred CCCeeEEcCcceeeecCCcEEEEEEEeccCCCeEEEEECCeeccCCCCceEEEeCCCCCeEEEEccCCCCCCCeEEEEEe
Q psy2442 9 DPPEITLRPRNQAVKAGGITSFYCIARGDPIPVIQWRKNGKRVSGTQSRYMVQEFPPGGSLLRIEPVRHARDDAVYECVA 88 (111)
Q Consensus 9 ~~p~~~~~~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~g~y~c~~ 88 (111)
.+|.+...+.. .+..|++++|.|...+. ...+.|++++..... .++ ........|.|.++.. .|+|.|.|.+
T Consensus 4 ~kP~i~~~p~~-~v~~G~~VtL~C~~~~~-~~~~~w~k~g~~~~~--~~~---~~~~~~~~l~I~~v~~-~dsG~Y~C~~ 75 (105)
T 2vsd_A 4 PQPSLSLHPSQ-GVSLGDTVTLRCHLPRM-AAWVQLWLNGTLRFD--KEK---DKEQDAAEFSFAVTNL-EDAGTYQCRY 75 (105)
T ss_dssp CCCEEEEESCS-SCCTTCEEEEEEECCSS-CEEEEEEETTEEEEE--EEE---CTTCSEEEEEEECCSG-GGCEEEEEEE
T ss_pred CCCEEEeCCCC-CcCcCCCEEEEEEcCCC-CcEEEEEECCcccee--eec---cCCCCEEEEEECCCCH-HHCeEEEEEE
Confidence 35666666655 68899999999998764 347789998875431 111 0111335589999998 9999999999
Q ss_pred eeCC---CceEeeEEEEEEe
Q psy2442 89 ENGV---GDAVSAEASLTVY 105 (111)
Q Consensus 89 ~~~~---~~~~~~~~~l~~~ 105 (111)
.|.. ....+..+.|.|.
T Consensus 76 ~n~~~~~~s~~Sdpl~L~V~ 95 (105)
T 2vsd_A 76 QVSEPLWTSNQSDPVELVLT 95 (105)
T ss_dssp EEETTEEECCCCCCEEECCC
T ss_pred EcCCCCcccCCCCCEEEEEE
Confidence 8843 1222455665554
No 241
>1i8k_A Epidermal growth factor receptor antibody MR1SCFV light chain; antibody-peptide complex, immunoglobulin fold, type II' beta turn., immune system; 1.80A {Mus musculus} SCOP: b.1.1.1 PDB: 1i8i_A
Probab=99.20 E-value=2.7e-10 Score=56.77 Aligned_cols=77 Identities=21% Similarity=0.344 Sum_probs=54.6
Q ss_pred eEEcCcceeeecCCcEEEEEEEeccCCCeEEEEECC--ee---c-c-------CCCCceEEEeCCCCCeEEEEccCCCCC
Q psy2442 13 ITLRPRNQAVKAGGITSFYCIARGDPIPVIQWRKNG--KR---V-S-------GTQSRYMVQEFPPGGSLLRIEPVRHAR 79 (111)
Q Consensus 13 ~~~~~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~~--~~---~-~-------~~~~~~~~~~~~~~~~~l~~~~~~~~~ 79 (111)
+.+.+..+.+.+|++++|.|...+.+.+.+.|++.. .. + . ....|+...... ....|.|.+++. +
T Consensus 4 v~q~p~~~~~~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~-~~~~L~I~~v~~-~ 81 (107)
T 1i8k_A 4 LTQSPASLSVATGEKVTIRCMTSTDIDDDMNWYQQKPGEPPKFLISEGNTLRPGVPSRFSSSGTG-TDFVFTIENTLS-E 81 (107)
T ss_dssp EEEECSEEECCTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEET-TEEEEEESSCCG-G
T ss_pred eEeCCCeEEecCCCCEEEEEEECCCCCCcEEEEEECCCCCCEEEEEecCccCCCCCCCEEEEccC-CEEEEEECCCCH-H
Confidence 345566678899999999999988777789999853 11 1 0 112455543211 334599999998 9
Q ss_pred CCeEEEEEeeeC
Q psy2442 80 DDAVYECVAENG 91 (111)
Q Consensus 80 d~g~y~c~~~~~ 91 (111)
|+|.|.|.+.+.
T Consensus 82 DsG~Y~C~~~~~ 93 (107)
T 1i8k_A 82 DVGDYYCLQSFN 93 (107)
T ss_dssp GCEEEEEEECSS
T ss_pred HCEEEEEEEeeC
Confidence 999999998774
No 242
>3o4o_C Interleukin-1 receptor type 2; cytokine-receptor complex, beta-trefoil, IG-like fold, immun; HET: NAG; 3.30A {Homo sapiens}
Probab=99.20 E-value=1.6e-10 Score=67.75 Aligned_cols=83 Identities=18% Similarity=0.316 Sum_probs=63.2
Q ss_pred eeeecCCcEEEEEE-----EeccCCCeEEEEECCeeccCCCCceEEEeCCCCCeEEEEccCCCCCCCeEEEEEeeeCCCc
Q psy2442 20 QAVKAGGITSFYCI-----ARGDPIPVIQWRKNGKRVSGTQSRYMVQEFPPGGSLLRIEPVRHARDDAVYECVAENGVGD 94 (111)
Q Consensus 20 ~~~~~g~~~~l~c~-----~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~g~y~c~~~~~~~~ 94 (111)
..+..|+.+.|.|. ..+.|.+.+.|++++..+.....++.... ....|.|..+.. .|.|.|.|.+.|..|.
T Consensus 130 ~~~~~g~~v~l~C~~~~~~~~g~p~~~v~W~k~g~~~~~~~~~~~~~~---~~~~L~i~~v~~-~d~G~Y~C~a~n~~g~ 205 (339)
T 3o4o_C 130 QILTLSTSGVLVCPDLSEFTRDKTDVKIQWYKDSLLLDKDNEKFLSVR---GTTHLLVHDVAL-EDAGYYRCVLTFAHEG 205 (339)
T ss_dssp EEEETTSCEEEECCSCTTTCCSSSCCCBCCEESSCBCCTTCSSEEECT---TSSEEEESSCCG-GGCEEEEEEEECCBTT
T ss_pred eEEECCCCEEEEecCCcccccCCCCceEEEecCCeeCCCCCceeEEcC---CcceEEEcccCH-hhCeEEEEEEEECCCC
Confidence 35778999999999 77888889999999988865445554432 334699999998 9999999999997763
Q ss_pred ---eEeeEEEEEEec
Q psy2442 95 ---AVSAEASLTVYE 106 (111)
Q Consensus 95 ---~~~~~~~l~~~~ 106 (111)
.....+.|.|..
T Consensus 206 ~~~~~~~~~~l~V~~ 220 (339)
T 3o4o_C 206 QQYNITRSIELRIKK 220 (339)
T ss_dssp BCCEEEEEEEEEEEC
T ss_pred eEEEEEEEEEEEEEc
Confidence 124556666654
No 243
>4frw_A Poliovirus receptor-related protein 4; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; 3.50A {Homo sapiens}
Probab=99.20 E-value=1.6e-10 Score=63.40 Aligned_cols=84 Identities=15% Similarity=0.215 Sum_probs=57.2
Q ss_pred CcceeeecCCcEEEEEEEeccCCCeEEEEECCeeccCCCCceEEEeCCCCCeEEEEccCCCCCCCeEEEEEeeeCCCceE
Q psy2442 17 PRNQAVKAGGITSFYCIARGDPIPVIQWRKNGKRVSGTQSRYMVQEFPPGGSLLRIEPVRHARDDAVYECVAENGVGDAV 96 (111)
Q Consensus 17 ~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~g~y~c~~~~~~~~~~ 96 (111)
.....+..+..+.+.|.+.+.|.|.+.|++++..+... ..............|.|..+.. .|.|.|.|.+.|..|..
T Consensus 125 ~~~~~~~~~~~~~~~c~~~g~p~p~i~W~~~~~~~~~~-~~~~~~~~~~~~s~L~i~~~~~-~d~g~YtC~a~N~~g~~- 201 (218)
T 4frw_A 125 GPALEEGQGLTLAASCTAEGSPAPSVTWDTEVKGTTSS-RSFKHSRSAAVTSEFHLVPSRS-MNGQPLTCVVSHPGLLQ- 201 (218)
T ss_dssp CSCEETTCCSEEEEEEEEEEBSCCEEEEEESSCCEEEE-EEEECSSSEEEEEEEEECCCGG-GTTCEEEEEEECTTCSS-
T ss_pred eeeeeeeeccccceeeeccCCcCceEEEEECCcccccC-ceEecCCcEEEEEEEEEeeCCH-HhCeEEEEEEEeCCCCe-
Confidence 33445667889999999999999999999987765421 1111000000123488888888 99999999999998753
Q ss_pred eeEEEEE
Q psy2442 97 SAEASLT 103 (111)
Q Consensus 97 ~~~~~l~ 103 (111)
...+.+.
T Consensus 202 ~~~~t~~ 208 (218)
T 4frw_A 202 DQRITHI 208 (218)
T ss_dssp CEEEEEE
T ss_pred EEEEEEE
Confidence 4444443
No 244
>3rjd_A High affinity immunoglobulin gamma FC receptor I; immune system; HET: NAG MAN FUC P33; 2.65A {Homo sapiens}
Probab=99.19 E-value=3.8e-10 Score=63.80 Aligned_cols=92 Identities=18% Similarity=0.147 Sum_probs=66.5
Q ss_pred eeEEecCCCeeEEcCcceeeecCCcEEEEEEE-eccCCCeEEEEECCeeccCCCCceEEEeCCCCCeEEEEccCCCCCCC
Q psy2442 3 RKVRFLDPPEITLRPRNQAVKAGGITSFYCIA-RGDPIPVIQWRKNGKRVSGTQSRYMVQEFPPGGSLLRIEPVRHARDD 81 (111)
Q Consensus 3 ~~l~v~~~p~~~~~~~~~~~~~g~~~~l~c~~-~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~ 81 (111)
+.|.|..++... .+....+..|+.+.|.|.. .+.+.+.+.|++++..+... . ....|.+..+.. .|.
T Consensus 76 ~~l~v~~~~~~~-~~~~~~~~~g~~v~l~C~~~~~~p~~~v~W~~~g~~~~~~-----~-----~~~~l~i~~~~~-~d~ 143 (262)
T 3rjd_A 76 IQLEIHRGWLLL-QVSSRVFTEGEPLALRCHAWKDKLVYNVLYYRNGKAFKFF-----H-----WNSNLTILKTNI-SHN 143 (262)
T ss_dssp EEEEEECSSEEE-EESCSEEETTSCEEEEEEEGGGCCCEEEEEEETTEEEEEE-----E-----ECCCEEESSCCG-GGC
T ss_pred EEEEEeccceEe-cCCCeEEecCCeEEEEEEccCCCCCceEEEEECCcccccc-----C-----CCCeEEEEECCh-hhC
Confidence 456666655443 3344567899999999999 66777799999988876321 0 123388999998 999
Q ss_pred eEEEEEeeeCCCceEeeEEEEEEecC
Q psy2442 82 AVYECVAENGVGDAVSAEASLTVYEG 107 (111)
Q Consensus 82 g~y~c~~~~~~~~~~~~~~~l~~~~~ 107 (111)
|.|.|.+.|..+. ....+.+.+...
T Consensus 144 G~Y~C~~~n~~~~-~~~~~~l~V~~~ 168 (262)
T 3rjd_A 144 GTYHCSGMGKHRY-TSAGISVTVKEL 168 (262)
T ss_dssp EEEEEEEESSSEE-EEECEEEEEECS
T ss_pred EEEEEEEeCCCCc-cccceEEEeccC
Confidence 9999999998754 366667777654
No 245
>3rbs_A Myomesin-1; immunoglobulin C-SET domain, contractIle protein; 1.85A {Homo sapiens}
Probab=99.19 E-value=7.6e-10 Score=61.21 Aligned_cols=70 Identities=14% Similarity=0.199 Sum_probs=54.5
Q ss_pred ceeeecCCcEEEEEEEec-cCCCeEEEEECCeeccCCCCceEEEeCC-CCCeEEEEccCCCCCCCeEEEEEeee
Q psy2442 19 NQAVKAGGITSFYCIARG-DPIPVIQWRKNGKRVSGTQSRYMVQEFP-PGGSLLRIEPVRHARDDAVYECVAEN 90 (111)
Q Consensus 19 ~~~~~~g~~~~l~c~~~~-~~~~~~~w~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~~~d~g~y~c~~~~ 90 (111)
...+.+|+.+.|.|.+.+ .|.|.+.|+++|..+... .++.+.... .....|.|.++.. .|+|.|.|.+.|
T Consensus 11 ~~~v~eg~~v~l~c~~~~~~P~p~i~W~kng~~l~~~-~~~~~~~~~~~g~~~L~I~~v~~-~D~G~Y~C~a~N 82 (207)
T 3rbs_A 11 AVEILEKGQVRFWMQAEKLSGNAKVNYIFNEKEIFEG-PKYKMHIDRNTGIIEMFMEKLQD-EDEGTYTFQLQD 82 (207)
T ss_dssp EEEECGGGCEEEEEECSCCCSCCEEEEEETTEEECSS-SSCEEEECTTTCEEEEEESCCCG-GGCEEEEEEEEE
T ss_pred ceEEEeCCeEEEEEEEecCCCCCEEEEEECCEECccC-CCEEEEEeCCCCEEEEEECCCCh-hhCEEEEEEEEC
Confidence 467889999999999864 688899999999998644 444443321 1223489999998 999999999998
No 246
>2znx_A SCFV; fluorotryptohpan, 5-fluorotryptophan, 19F, single chain FV, allergen, antimicrobial, bacteriolytic enzyme, glycosidase, hydrolase; HET: FTR 1PG; 2.30A {Homo sapiens} PDB: 2znw_A*
Probab=99.19 E-value=3.1e-10 Score=63.94 Aligned_cols=92 Identities=20% Similarity=0.215 Sum_probs=61.1
Q ss_pred eEEcCcceeeecCCcEEEEEEEeccCCCeEEEEECC--eec---c--------CCCCceEEEeCCCCCeEEEEccCCCCC
Q psy2442 13 ITLRPRNQAVKAGGITSFYCIARGDPIPVIQWRKNG--KRV---S--------GTQSRYMVQEFPPGGSLLRIEPVRHAR 79 (111)
Q Consensus 13 ~~~~~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~~--~~~---~--------~~~~~~~~~~~~~~~~~l~~~~~~~~~ 79 (111)
+.+.+..+.+..|++++|.|...+.+.+.+.|++.. ..+ . ....++...... ....|.|.++.. .
T Consensus 4 v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~-~~~~L~I~~v~~-~ 81 (242)
T 2znx_A 4 LTQSPATLSVTPGNSVSLSCRASQSIGNNLHXYQQKSHESPRLLIKYASQSISGIPSRFSGSGSG-TDFTLSINSVET-E 81 (242)
T ss_dssp EEEECSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEET-TEEEEEESSCCG-G
T ss_pred EEEcCCeEEEcCCCcEEEEEEeCCCCCceEEEEEeCCCCCceEEEEeccccCCCCCCCEEEecCC-CEEEEEECCCCh-H
Confidence 445666678999999999999998888899999842 111 0 012455543211 334599999998 9
Q ss_pred CCeEEEEEeeeCCCceEeeEEEEEEec
Q psy2442 80 DDAVYECVAENGVGDAVSAEASLTVYE 106 (111)
Q Consensus 80 d~g~y~c~~~~~~~~~~~~~~~l~~~~ 106 (111)
|+|.|.|.+.|..+........|.|..
T Consensus 82 D~G~Y~C~~~n~~~~~~~~~~~L~V~~ 108 (242)
T 2znx_A 82 DFGMYFCQQSNSXPYTFGGGTKLEITG 108 (242)
T ss_dssp GCEEEEEEECSSSSCEECCCEEEEEC-
T ss_pred HCEEEEEeEecCCceEECCCEEEEEcC
Confidence 999999999886432112233444444
No 247
>3r08_E T-cell surface glycoprotein CD3 epsilon chain; antibody, T-cell receptor, signalling, immune SY; 4.10A {Cricetulus migratorius}
Probab=99.19 E-value=1.9e-11 Score=58.07 Aligned_cols=60 Identities=18% Similarity=0.375 Sum_probs=46.8
Q ss_pred CcceeeecCCcEEEEEEEeccCCCeEEEEECCeeccCCCCceEEEeCCCCCeEEEEccC-CCCCCCeEEEEEeee
Q psy2442 17 PRNQAVKAGGITSFYCIARGDPIPVIQWRKNGKRVSGTQSRYMVQEFPPGGSLLRIEPV-RHARDDAVYECVAEN 90 (111)
Q Consensus 17 ~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~d~g~y~c~~~~ 90 (111)
++...+..|++++|.|.+.+.|. +.|+++|..+... ....|.|.++ .. .|+|.|.|.+..
T Consensus 6 p~~~v~~~G~~v~L~C~~~g~P~--i~W~kdg~~l~~~-----------~~~~L~I~~v~~~-~DsG~Y~C~A~t 66 (82)
T 3r08_E 6 IEYKVSISGTSVELTCPLDSDEN--LKWEKNGQELPQK-----------HDKHLVLQDFSEV-EDSGYYVCYTPA 66 (82)
T ss_dssp CCCEEEEETTEEEEECSSCCCSS--CEEEETTEECTTC-----------CSSCCBCCSCCTT-TTCSCEEEECSS
T ss_pred CceeEEEcCCeEEEEEECCCCCc--EEEEECCEECcCC-----------CCCEEEECccCcc-CcCEEEEEEEcc
Confidence 44456778999999999998873 9999999987532 1223778885 76 999999999864
No 248
>2wng_A Tyrosine-protein phosphatase non-receptor type substrate 1; signal regulatory protein alpha, immunoglobulin superfamily, phosphoprotein; HET: NAG; 2.49A {Homo sapiens}
Probab=99.19 E-value=4.3e-10 Score=65.73 Aligned_cols=98 Identities=17% Similarity=0.219 Sum_probs=65.1
Q ss_pred eeEEcCcceeeecCCcEEEEEEEecc-CCCeEEEEECCeecc----C----CCCceEEEeCC----CCCeEEEEccCCCC
Q psy2442 12 EITLRPRNQAVKAGGITSFYCIARGD-PIPVIQWRKNGKRVS----G----TQSRYMVQEFP----PGGSLLRIEPVRHA 78 (111)
Q Consensus 12 ~~~~~~~~~~~~~g~~~~l~c~~~~~-~~~~~~w~~~~~~~~----~----~~~~~~~~~~~----~~~~~l~~~~~~~~ 78 (111)
.+...+..+.+..|+.+.|.|.+.+. |.+.+.|++++.... . ...++...... .....|.|.++..
T Consensus 5 ~v~~~p~~~~v~~G~~v~L~C~~~~~~p~~~v~W~k~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~~~~L~I~~v~~- 83 (327)
T 2wng_A 5 QVIQPDKSVSVAAGESAILHCTVTSLIPVGPIQWFRGAGPARELIYNQKEGHFPRVTTVSESTKRENMDFSISISNITP- 83 (327)
T ss_dssp CEECCCSEEEEETTSCEEECCEESCCCSCCCEEEEESCSTTCEEEEETTSSCCTTEEECC---CTTCCBCCEEECSCCG-
T ss_pred EEEcCCCceEEecCCcEEEEEEccCcCCCceEEEEECCCCCceEEEEcCCCCcceeeeecccccccCceeEEEEccCcc-
Confidence 44555667889999999999999887 778999999865321 0 11233322100 1334599999998
Q ss_pred CCCeEEEEEeeeCCCceE----eeEEEEEEecCCCC
Q psy2442 79 RDDAVYECVAENGVGDAV----SAEASLTVYEGEEK 110 (111)
Q Consensus 79 ~d~g~y~c~~~~~~~~~~----~~~~~l~~~~~~~~ 110 (111)
.|+|.|.|.+.|..+... .....|.|...|..
T Consensus 84 ~D~G~Y~C~a~n~~~~~~~~~~~~~~~l~V~~~p~~ 119 (327)
T 2wng_A 84 ADAGTYYCVKFRKGSPDTEFKSGAGTELSVRAKPSA 119 (327)
T ss_dssp GGCEEEEEEEEESSTTCEEEEECCCEEEEEEBCCCC
T ss_pred ccCeEEEEEeecCCCcceeEeecCcEEEEEEecCCC
Confidence 999999999999755311 12346666665544
No 249
>1nkr_A P58-CL42 KIR; inhibitory receptor, natural killer cells, immunological receptors, immunoglobulin fold; 1.70A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1m4k_A 1efx_D 2dli_A 2dl2_A 3h8n_A
Probab=99.19 E-value=2.4e-10 Score=62.71 Aligned_cols=97 Identities=11% Similarity=0.064 Sum_probs=60.6
Q ss_pred ecCCCeeEEcCcceeeecCCcEEEEEEEeccCCCeEEEEECCeeccCCCCceEEEeCCCCCeEEEEccCCCCCCCeEEEE
Q psy2442 7 FLDPPEITLRPRNQAVKAGGITSFYCIARGDPIPVIQWRKNGKRVSGTQSRYMVQEFPPGGSLLRIEPVRHARDDAVYEC 86 (111)
Q Consensus 7 v~~~p~~~~~~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~g~y~c 86 (111)
+..+|.+...+. ..+..|++++|.|.+.+ +.+.+.|++++..+... ..............|.|.++.. .|+|.|.|
T Consensus 5 ~~~~P~i~~~p~-~~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~-~~~~~~~~~~~~~~l~I~~v~~-~D~G~Y~C 80 (201)
T 1nkr_A 5 VHRKPSLLAHPG-PLVKSEETVILQCWSDV-MFEHFLLHREGMFNDTL-RLIGEHHDGVSKANFSISRMTQ-DLAGTYRC 80 (201)
T ss_dssp --CCCEEEEESC-SEEETTCCEEEEEEESS-CCSEEEEEEESSSCEEE-EEECEEETTEEEEEEEESSCCG-GGCEEEEE
T ss_pred cCCCCeEEEEcC-CccCCCCcEEEEEeccC-CCCEEEEEECCCcCCcc-eeeeecCCCCceEEEEeccCCc-ccCeEEEE
Confidence 345677766665 57889999999999864 56789999987754311 0000000000234589999998 99999999
Q ss_pred EeeeCC----CceEeeEEEEEEecC
Q psy2442 87 VAENGV----GDAVSAEASLTVYEG 107 (111)
Q Consensus 87 ~~~~~~----~~~~~~~~~l~~~~~ 107 (111)
.+.+.. ....+..+.|.|.+.
T Consensus 81 ~a~~~~~~~~~~~~s~~~~l~V~~~ 105 (201)
T 1nkr_A 81 YGSVTHSPYQVSAPSDPLDIVIIGL 105 (201)
T ss_dssp EEEBTTBTTCCCCCCCCEEEEEECS
T ss_pred eEecCCCCccccCCCCCEEEEeecc
Confidence 997642 111134455555543
No 250
>4dzb_B Vbeta2 (MAIT T cell receptor); immune system; 1.70A {Homo sapiens} PDB: 1ymm_E* 3o4l_E* 3o6f_D 3t0e_D 1ktk_E 3mfg_B 2ij0_E
Probab=99.19 E-value=9.7e-10 Score=61.88 Aligned_cols=79 Identities=14% Similarity=0.268 Sum_probs=56.2
Q ss_pred eeEEcCcceeeecCCcEEEEEEEeccCCCeEEEEEC----------------CeeccCC--CCceEEEeCCCCCeEEEEc
Q psy2442 12 EITLRPRNQAVKAGGITSFYCIARGDPIPVIQWRKN----------------GKRVSGT--QSRYMVQEFPPGGSLLRIE 73 (111)
Q Consensus 12 ~~~~~~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~----------------~~~~~~~--~~~~~~~~~~~~~~~l~~~ 73 (111)
.+.+.+..+.+..|++++|.|...+.+.+.+.|++. +...... ..++...........|.|.
T Consensus 3 ~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~ 82 (246)
T 4dzb_B 3 VVSQHPSWVISKSGTSVKIECRSLDFQATTMFWYRQFPKQSLMLMATSNEGSKATYEQGVEKDKFLINHASLTLSTLTVT 82 (246)
T ss_dssp CEEEECSEEEEETTSCEEEEEEESSSCCCSEEEEEECTTSCCEEEEEECTTSCCEECTTCCGGGEEEEEEETTEEEEEEC
T ss_pred ccEECCcEEEEeCCCcEEEEeEecCCCceEEEEEEECCCCCcEEEEEEccCCCceecCcccCCcEEEEecCCCEEEEEEC
Confidence 345566677899999999999999888889999982 2211111 1355444211133459999
Q ss_pred cCCCCCCCeEEEEEeeeC
Q psy2442 74 PVRHARDDAVYECVAENG 91 (111)
Q Consensus 74 ~~~~~~d~g~y~c~~~~~ 91 (111)
++.. .|+|.|.|.+.+.
T Consensus 83 ~v~~-~D~G~Y~C~~~~~ 99 (246)
T 4dzb_B 83 SAHP-EDSSFYICSARTS 99 (246)
T ss_dssp SCCG-GGCEEEEEEECCS
T ss_pred CCCH-HHCEEEEEEEecC
Confidence 9998 9999999999864
No 251
>3vh8_G Killer cell immunoglobulin-like receptor 3DL1; immunoglobulin fold, natural killer cell receptor, immune SY; HET: NAG; 1.80A {Homo sapiens} PDB: 1im9_D
Probab=99.18 E-value=8.5e-11 Score=68.47 Aligned_cols=80 Identities=16% Similarity=0.183 Sum_probs=54.8
Q ss_pred ceeEEecCCCeeEEcCcceeeecCCcEEEEEEEeccCCCeEEEEECCeeccCCCCceEEEeCCCCCeEEEEccCCCCCCC
Q psy2442 2 YRKVRFLDPPEITLRPRNQAVKAGGITSFYCIARGDPIPVIQWRKNGKRVSGTQSRYMVQEFPPGGSLLRIEPVRHARDD 81 (111)
Q Consensus 2 ~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~ 81 (111)
+++..+..+|.+...+. ..+..|+.++|.|.+.+. .+.+.|++++..+... .. .. .....|.|.++.. .|+
T Consensus 16 ~~~~~~~~~P~i~~~p~-~~v~~G~~v~L~C~~~~~-~~~~~W~k~g~~~~~~-~~--~~---~~~~~L~I~~v~~-~D~ 86 (316)
T 3vh8_G 16 GSHMGGQDKPFLSAWPS-AVVPRGGHVTLRCHYRHR-FNNFMLYKEDRIHIPI-FH--GR---IFQESFNMSPVTT-AHA 86 (316)
T ss_dssp --------CCEEEEESC-SEEETTSCEEEEEEBTTB-CCSEEEEESSCSSSCH-HH--HC---CBSSCEEECSCCG-GGC
T ss_pred ccccCCCCCCEeeccCC-CccCCCCCEEEEEEccCC-CceEEEEeCCCcccee-ec--CC---cceEEEEECCCCc-ccC
Confidence 45566777888887776 467899999999999887 6789999998765321 00 00 0234488999998 999
Q ss_pred eEEEEEeee
Q psy2442 82 AVYECVAEN 90 (111)
Q Consensus 82 g~y~c~~~~ 90 (111)
|.|.|.+.|
T Consensus 87 G~Y~C~a~~ 95 (316)
T 3vh8_G 87 GNYTCRGSH 95 (316)
T ss_dssp EEEEEEEBC
T ss_pred eEEEEEEEc
Confidence 999999875
No 252
>2yc1_B Single chain antibody fragment 9004G; immune system-toxin complex, scorpion toxin; 1.90A {Homo sapiens} PDB: 2ybr_B 3lh2_L 3h3p_L 3lhp_L
Probab=99.18 E-value=1.5e-09 Score=57.07 Aligned_cols=79 Identities=20% Similarity=0.278 Sum_probs=56.1
Q ss_pred CeeEEcCcceeeecCCcEEEEEEEeccCCCeEEEEECCe-----ec-c-------CCCCceEEEeCCCCCeEEEEccCCC
Q psy2442 11 PEITLRPRNQAVKAGGITSFYCIARGDPIPVIQWRKNGK-----RV-S-------GTQSRYMVQEFPPGGSLLRIEPVRH 77 (111)
Q Consensus 11 p~~~~~~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~~~-----~~-~-------~~~~~~~~~~~~~~~~~l~~~~~~~ 77 (111)
+.+.+.+..+.+.+|++++|.|...+.+.+.+.|++... .+ . ....|+...... ....|.|.+++.
T Consensus 17 ~~v~q~p~~v~v~~G~sVtL~C~~s~~~~~~v~Wyrq~~g~~~~~li~~~~~~~~~~~~Rfs~~~~~-~~~sL~I~~v~~ 95 (146)
T 2yc1_B 17 IVLTQSPATLSVSPGERATLSCRASQSVRSYLAWYQQKPGQAPRLLFSDASNRATGIPARFTGSGSG-TDFTLTISSLEP 95 (146)
T ss_dssp CCEEEECSEEEECTTSCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEET-TEEEEEESSCCG
T ss_pred ceEEEeCCEEEEecCCCEEEEEEECCCCCCEEEEEEECCCCCCEEEEEeCCccCCCcCCCeEEecCC-CEEEEEECCCCH
Confidence 445566777889999999999998877667899998531 11 1 012455544322 334599999998
Q ss_pred CCCCeEEEEEeeeC
Q psy2442 78 ARDDAVYECVAENG 91 (111)
Q Consensus 78 ~~d~g~y~c~~~~~ 91 (111)
+|+|.|.|.+.+.
T Consensus 96 -~DsG~Y~C~~~~~ 108 (146)
T 2yc1_B 96 -EDFAIYYCQQYRY 108 (146)
T ss_dssp -GGCSEEEEEECSS
T ss_pred -HHCEEEEEEEecC
Confidence 9999999998875
No 253
>1zox_A CLM-1; IG-superfamily, IG-V, NKP44-like, myeloid IG-like receptor, structural genomics, PSI, protein structure initiative; 2.10A {Mus musculus}
Probab=99.18 E-value=1.7e-09 Score=54.24 Aligned_cols=91 Identities=13% Similarity=0.145 Sum_probs=61.1
Q ss_pred cCcceeeecCCcEEEEEEEeccCCC-eEEEEECCee-----c-c--C-----CCCceEEEeC-CCCCeEEEEccCCCCCC
Q psy2442 16 RPRNQAVKAGGITSFYCIARGDPIP-VIQWRKNGKR-----V-S--G-----TQSRYMVQEF-PPGGSLLRIEPVRHARD 80 (111)
Q Consensus 16 ~~~~~~~~~g~~~~l~c~~~~~~~~-~~~w~~~~~~-----~-~--~-----~~~~~~~~~~-~~~~~~l~~~~~~~~~d 80 (111)
.+..+.+..|++++|.|........ .+.|++.... + . . ...|+..... ......|.|.+++. +|
T Consensus 7 ~p~~v~~~~G~~v~L~C~~~~~~~~~~v~W~~~~~~~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~~~~-~D 85 (113)
T 1zox_A 7 GPEEVSGQEQGSLTVQCRYTSGWKDYKKYWCQGVPQRSCKTLVETDASEQLVKKNRVSIRDNQRDFIFTVTMEDLRM-SD 85 (113)
T ss_dssp CCSEEEEETTSCEEEEEEECGGGTTSCEEEEESSSGGGCEEEEECCSSSCCEEETTEEEEEETTTTEEEEEECSCCG-GG
T ss_pred CCCEEEEeCCCcEEEEeECCCCcccceEEEEeCCCCCCCeEEEEecCccccccCCCEEEEECCcCCEEEEEEccCCH-HH
Confidence 4455788999999999998765433 6999986421 1 0 0 1134544321 21234599999998 99
Q ss_pred CeEEEEEeeeCCCceEeeEEEEEEecCC
Q psy2442 81 DAVYECVAENGVGDAVSAEASLTVYEGE 108 (111)
Q Consensus 81 ~g~y~c~~~~~~~~~~~~~~~l~~~~~~ 108 (111)
+|.|.|.+.+.... ....+.|.|...|
T Consensus 86 sG~Y~C~v~~~~~~-~~~~v~L~V~~~p 112 (113)
T 1zox_A 86 AGIYWCGITKGGLD-PMFKVTVNIGPVP 112 (113)
T ss_dssp CEEEEEEECCSSSC-CEEEEEEEEECC-
T ss_pred CEEEEEeeEcCCCC-ccEEEEEEEEcCC
Confidence 99999999886433 3667778777654
No 254
>1sy6_A T-cell surface glycoprotein CD3 gamma/epsilon chain; CD3 epsilon, OKT3 FAB, signaling protein/antibiotic complex; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 2atp_E*
Probab=99.18 E-value=3.7e-11 Score=66.30 Aligned_cols=74 Identities=16% Similarity=0.311 Sum_probs=54.8
Q ss_pred cCCcEEEEEEEeccCCCeEEEEECCeeccCCC-CceEEEeCCCCCeEEEEccC-CCCCCCeEEEEEeeeCCCceEeeEEE
Q psy2442 24 AGGITSFYCIARGDPIPVIQWRKNGKRVSGTQ-SRYMVQEFPPGGSLLRIEPV-RHARDDAVYECVAENGVGDAVSAEAS 101 (111)
Q Consensus 24 ~g~~~~l~c~~~~~~~~~~~w~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~-~~~~d~g~y~c~~~~~~~~~~~~~~~ 101 (111)
.|+.++|.|. +.|.+.+.|++++..+.... .+.... ....|.|.++ .. .|+|.|.|.+.|..|...+..+.
T Consensus 127 ~G~~v~L~C~--g~p~p~i~W~k~~~~l~~~~~~~~~~~----~~~~L~I~~v~~~-~D~G~Y~C~A~N~~g~~~s~~l~ 199 (204)
T 1sy6_A 127 SGTTVILTCP--QYPGSEILWQHNDKNIGGDEDDKNIGS----DEDHLSLKEFSEL-EQSGYYVCYPRGSKPEDANFYLY 199 (204)
T ss_dssp ETTEEEEECS--CCCSSCEEEEETTEEESCCTTCTTEEE----ETTEEEETTCCHH-HHCEEEEEEETTSCGGGSSCEEE
T ss_pred cCCcEEEEcC--CCCCCceEEEECCEECCCccCCceEec----CCCEEEEeeCCcc-ccCEEEEEEeccCCCCceeEEEE
Confidence 8999999998 67788999999998875321 122111 2345999999 88 99999999999988753345555
Q ss_pred EEE
Q psy2442 102 LTV 104 (111)
Q Consensus 102 l~~ 104 (111)
|.+
T Consensus 200 l~~ 202 (204)
T 1sy6_A 200 LRA 202 (204)
T ss_dssp EEE
T ss_pred EEE
Confidence 544
No 255
>1i3g_L Antibody FV fragment; antibiotic; 2.44A {Mus musculus} SCOP: b.1.1.1 PDB: 3iy6_A
Probab=99.17 E-value=1.3e-09 Score=54.58 Aligned_cols=78 Identities=21% Similarity=0.242 Sum_probs=55.3
Q ss_pred eeEEcCcceeeecCCcEEEEEEEeccCCCeEEEEECCe-----ecc--------CCCCceEEEeCCCCCeEEEEccCCCC
Q psy2442 12 EITLRPRNQAVKAGGITSFYCIARGDPIPVIQWRKNGK-----RVS--------GTQSRYMVQEFPPGGSLLRIEPVRHA 78 (111)
Q Consensus 12 ~~~~~~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~~~-----~~~--------~~~~~~~~~~~~~~~~~l~~~~~~~~ 78 (111)
.+.+.+..+.+.+|++++|.|...+.+.+.+.|++... .+. ....++...... ....|.|.+++.
T Consensus 6 ~v~q~p~~~~~~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~R~~~~~~~-~~~~L~I~~v~~- 83 (111)
T 1i3g_L 6 VLTQSHKFMSTSVGDRVSITCKASQDVGTAVAWYQQKPGQSPKLLIYWASTRHTGVPDRFTGSGSG-TDFTLTISNVQS- 83 (111)
T ss_dssp CEEESCSEEECCTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEET-TEEEEEESSCCG-
T ss_pred eEEEeCCEEEEcCCCCEEEEEEeCCCCCCCEEEEEECCCCCCEEEEEECCccCCCCCCcEEEEcCC-CEEEEEECCCCH-
Confidence 34556666788999999999998877667899997532 110 112455543211 334599999998
Q ss_pred CCCeEEEEEeeeC
Q psy2442 79 RDDAVYECVAENG 91 (111)
Q Consensus 79 ~d~g~y~c~~~~~ 91 (111)
+|+|.|.|.+.+.
T Consensus 84 ~DsG~Y~C~~~~~ 96 (111)
T 1i3g_L 84 EDLADYFCQQYSS 96 (111)
T ss_dssp GGCSEEEEEECSS
T ss_pred HHCEEEEEEEecC
Confidence 9999999998764
No 256
>2ywz_A NEW antigen receptor variable domain; IG VNAR, immune system; 2.21A {Orectolobus maculatus} PDB: 2ywy_A
Probab=99.17 E-value=8.2e-10 Score=55.38 Aligned_cols=77 Identities=21% Similarity=0.405 Sum_probs=54.4
Q ss_pred eEEcCcceeeecCCcEEEEEEEecc--CCCeEEEEEC--Cee---ccCCCCceEEEe-CCCCCeEEEEccCCCCCCCeEE
Q psy2442 13 ITLRPRNQAVKAGGITSFYCIARGD--PIPVIQWRKN--GKR---VSGTQSRYMVQE-FPPGGSLLRIEPVRHARDDAVY 84 (111)
Q Consensus 13 ~~~~~~~~~~~~g~~~~l~c~~~~~--~~~~~~w~~~--~~~---~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~d~g~y 84 (111)
+.+.+..+.+.+|++++|.|...+. +.+.+.|++. +.. +.....++.... .......|.|.+++. +|+|.|
T Consensus 3 v~q~p~~~~~~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~-~DsG~Y 81 (111)
T 2ywz_A 3 VDQTPRTITKETGESLTIKCVLKDHSCGLSSTTWYRTQLGSTNEKTISIGGRYDETVDKGSKSFSLRISDLRV-EDSGTY 81 (111)
T ss_dssp EEEECSEEEECTTCCEEEEEEEESCSSCCCEEEEEEEETTCCCCEECCSBTTEEEEEETTTTEEEEEECSCCG-GGCEEE
T ss_pred eEECCCcEEEccCCCEEEEeEECCCCCCCCEEEEEEeCCCCCceEeeEeCCCEEEEEeCCCCEEEEEECCCCh-hcCEEE
Confidence 4456677789999999999998775 4568999985 221 111224554432 111345599999998 999999
Q ss_pred EEEeee
Q psy2442 85 ECVAEN 90 (111)
Q Consensus 85 ~c~~~~ 90 (111)
.|.+.+
T Consensus 82 ~C~~~~ 87 (111)
T 2ywz_A 82 KCQADY 87 (111)
T ss_dssp EEEEEE
T ss_pred EEEEEc
Confidence 999988
No 257
>1ry7_B FGFR-3, fibroblast growth factor receptor 3; FGF-FGFR complex, beta trefoil, IG domain, growth factor/growth factor receptor complex; 3.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.17 E-value=7e-11 Score=69.12 Aligned_cols=84 Identities=35% Similarity=0.519 Sum_probs=62.5
Q ss_pred eeeecCCcEEEEEEEeccCCCeEEEEECCeeccCCCCceEEEeCCCCCeEEEEccCCCCCCCeEEEEEeeeCCCceEeeE
Q psy2442 20 QAVKAGGITSFYCIARGDPIPVIQWRKNGKRVSGTQSRYMVQEFPPGGSLLRIEPVRHARDDAVYECVAENGVGDAVSAE 99 (111)
Q Consensus 20 ~~~~~g~~~~l~c~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~g~y~c~~~~~~~~~~~~~ 99 (111)
..+..|+.+.|.|.+.+.|.+.+.|++++..+.... ++...........|.|.++.. .|.|.|.|.+.|..|.. ...
T Consensus 133 ~~v~~g~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~-~~~~~~~~~~~~~L~i~~v~~-~d~G~Y~C~a~n~~g~~-~~~ 209 (334)
T 1ry7_B 133 LAVPAANTVRFRCPAAGNPTPSISWLKNGREFRGEH-RIGGIKLRHQQWSLVMESVVP-SDRGNYTCVVENKFGSI-RQT 209 (334)
T ss_dssp EEEETTCCEEEECCCCCSSCCEEECCBTTBCCCTTS-STTCCCCCTTTTEEEECSCCG-GGCCCEEEEEEETTEEE-EEE
T ss_pred EEecCCCcEEEEEEccCCCCCeEEEEECCEECcccc-cccceecccceEEEEECCCCc-ccCEEEEEEEEeCCCCE-EEE
Confidence 467789999999999999989999999988775431 110000111334589999998 99999999999988764 667
Q ss_pred EEEEEec
Q psy2442 100 ASLTVYE 106 (111)
Q Consensus 100 ~~l~~~~ 106 (111)
+.+.+..
T Consensus 210 ~~l~V~~ 216 (334)
T 1ry7_B 210 YTLDVLE 216 (334)
T ss_dssp EEEEEEC
T ss_pred EEEEEec
Confidence 7777765
No 258
>2gki_A Nuclease; anti-DNA antibody, catalytic antibody, immune system; 2.88A {Mus musculus}
Probab=99.17 E-value=5.9e-10 Score=64.49 Aligned_cols=79 Identities=22% Similarity=0.305 Sum_probs=54.7
Q ss_pred eeEEcCcceeeecCCcEEEEEEEeccCCC------eEEEEECC--eecc-----------CCCCceEEEeCCCCCeEEEE
Q psy2442 12 EITLRPRNQAVKAGGITSFYCIARGDPIP------VIQWRKNG--KRVS-----------GTQSRYMVQEFPPGGSLLRI 72 (111)
Q Consensus 12 ~~~~~~~~~~~~~g~~~~l~c~~~~~~~~------~~~w~~~~--~~~~-----------~~~~~~~~~~~~~~~~~l~~ 72 (111)
.+...+..+.+.+|++++|.|.+.+.+.+ .+.|++.. ..+. ....++...... ....|.|
T Consensus 161 ~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~r~~~~~~~-~~~~L~I 239 (291)
T 2gki_A 161 VMSQSPSSLAVSAGEKVTMSCKSSQSLFNSRTRKNYLAWYQQKPGQSPKLLIYWASTRESGVPDRFTGSGSG-TDFTLTI 239 (291)
T ss_dssp CEECSCSEEEEETTSCEEEEEEESSCCEETTTTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEET-TEEEEEE
T ss_pred eEEcCCCEEEEcCCCcEEEEEEcCCccccccccceeEEEEEECCCCCcEEEEEEcccCCCCcCCCEEEEecC-CEEEEEE
Confidence 34445556778899999999999887665 89999852 2110 002344433211 3345999
Q ss_pred ccCCCCCCCeEEEEEeeeCC
Q psy2442 73 EPVRHARDDAVYECVAENGV 92 (111)
Q Consensus 73 ~~~~~~~d~g~y~c~~~~~~ 92 (111)
.++.. .|+|.|.|.+.|..
T Consensus 240 ~~v~~-~DsG~Y~C~a~~~~ 258 (291)
T 2gki_A 240 SSVQA-EDLAVYYCKQSYYH 258 (291)
T ss_dssp SSCCG-GGCEEEEEEEEETT
T ss_pred CCCCH-HHCEEEEEEEccCC
Confidence 99998 99999999998853
No 259
>4dep_C Interleukin-1 receptor accessory protein; B-trefoil, immunoglobulin, immune system, extracellular; HET: NAG; 3.10A {Homo sapiens} PDB: 3o4o_B*
Probab=99.17 E-value=4.9e-10 Score=65.95 Aligned_cols=97 Identities=14% Similarity=0.213 Sum_probs=66.3
Q ss_pred eeEEecCCCeeEEc----CcceeeecCCcEEEEEEE-----eccCCCeEEEEECCeeccCCCCceEEEeCCCCCeEEEEc
Q psy2442 3 RKVRFLDPPEITLR----PRNQAVKAGGITSFYCIA-----RGDPIPVIQWRKNGKRVSGTQSRYMVQEFPPGGSLLRIE 73 (111)
Q Consensus 3 ~~l~v~~~p~~~~~----~~~~~~~~g~~~~l~c~~-----~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 73 (111)
+.|.|..++.+... +....+..|+.+.|.|.. .+.|.+.+.|++++..+... .++.. ....|.|.
T Consensus 109 ~~l~V~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~g~p~~~v~W~k~~~~l~~~-~~~~~-----~~~~L~i~ 182 (349)
T 4dep_C 109 FPLEVVQKDSCFNSPMKLPVHKLYIEYGIQRITCPNVDGYFPSSVKPTITWYMGCYKIQNF-NNVIP-----EGMNLSFL 182 (349)
T ss_dssp EEEEEECCCTTSCCSCCCCEEEEETTCSEEEEECCSCTTSSCTTSCCEEEEEETTEECCSC-SSEEE-----ETTEEEEE
T ss_pred EEEEEecCCcccCcccccCcceeeecCccEEEEcCCCcccccCCCCceEEEeeCCEECCCc-cceee-----cCCEEEEe
Confidence 34666654432211 223466789999999985 67788899999999987542 23322 23458999
Q ss_pred cCCCCCCCeEEEEEeeeCC-Cce--EeeEEEEEEec
Q psy2442 74 PVRHARDDAVYECVAENGV-GDA--VSAEASLTVYE 106 (111)
Q Consensus 74 ~~~~~~d~g~y~c~~~~~~-~~~--~~~~~~l~~~~ 106 (111)
++.. .|.|.|.|.+.|.. |.. ....+.+.+..
T Consensus 183 ~v~~-~d~G~Y~C~a~n~~~g~~~~~~~~~~l~v~~ 217 (349)
T 4dep_C 183 IALI-SNNGNYTCVVTYPENGRTFHLTRTLTVKVVG 217 (349)
T ss_dssp SCCG-GGCEEEEEEEEEEETTEEEEEEEEEEEEEEC
T ss_pred eeee-cCCcEEEEEEEEeeCCEEEEEEEEEEEEEEc
Confidence 9998 99999999999976 332 24566666654
No 260
>3qs9_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, hematopoietic cytokine-receptor complex, cell surface, EXTR complex; 7.80A {Homo sapiens}
Probab=99.16 E-value=4.5e-10 Score=69.87 Aligned_cols=98 Identities=15% Similarity=0.163 Sum_probs=66.5
Q ss_pred eeEEecCCCeeEEcCcceeeecCCcEEEEEEEe-ccCCCeEEEEECCeeccCCCCceEEEe--CC---CCCeEEEEccCC
Q psy2442 3 RKVRFLDPPEITLRPRNQAVKAGGITSFYCIAR-GDPIPVIQWRKNGKRVSGTQSRYMVQE--FP---PGGSLLRIEPVR 76 (111)
Q Consensus 3 ~~l~v~~~p~~~~~~~~~~~~~g~~~~l~c~~~-~~~~~~~~w~~~~~~~~~~~~~~~~~~--~~---~~~~~l~~~~~~ 76 (111)
..|.|..+|.+ .+....+..|+.+.|.|.+. +.|.+.+.|++++..+... ..+.... .. .....|.|.++.
T Consensus 222 ~~l~V~~~p~~--~p~~~~v~~G~~v~L~C~~~~g~p~p~i~W~k~g~~l~~~-~~~~~~~~~~~~~~~~~~~L~I~~v~ 298 (527)
T 3qs9_E 222 FTIDLNQTPQT--TLPQLFLKVGEPLWIRCKAVHVNHGFGLTWELENKALEEG-NYFEMSTYSTNRTMIRILFAFVSSVA 298 (527)
T ss_dssp EEEESSSCCCC--SCCEEEECTTSCEEEEEEEEESSSCCCEEEECSSSCCCGG-GEEEEEEEETTTEEEEEEEEEESSCC
T ss_pred EEEEEeccCcc--CCCceEEeCCCeEEEEEEEccCCCCeEEEEEECCEECCCC-ceeeeeeeccCcceeeEEEEEEccCC
Confidence 34666666655 45567788999999999996 8888999999998876432 1111100 00 012348999999
Q ss_pred CCCCCeEEEEEeeeCCCceEeeEEEEEEecCC
Q psy2442 77 HARDDAVYECVAENGVGDAVSAEASLTVYEGE 108 (111)
Q Consensus 77 ~~~d~g~y~c~~~~~~~~~~~~~~~l~~~~~~ 108 (111)
. .|+|.|.|.+.|. ....+.|.|..+|
T Consensus 299 ~-~DsG~Y~C~a~N~----~~~~~~L~V~~~p 325 (527)
T 3qs9_E 299 R-NDTGYYTCSSSKH----PSQSALVTIVEKG 325 (527)
T ss_dssp G-GGCEEEEEEETTE----EEEEEEEEEC--C
T ss_pred c-ccCeEEEEEEEeC----CCceEEEEEEccC
Confidence 8 9999999999887 2555666665443
No 261
>3vh8_G Killer cell immunoglobulin-like receptor 3DL1; immunoglobulin fold, natural killer cell receptor, immune SY; HET: NAG; 1.80A {Homo sapiens} PDB: 1im9_D
Probab=99.16 E-value=1.1e-09 Score=63.84 Aligned_cols=99 Identities=14% Similarity=0.114 Sum_probs=62.2
Q ss_pred eEEecC---CCeeEEcCcceeeecCCcEEEEEEEeccCCCeEEEEECCeeccCCCCceEEEeCCCCCeEEEEccCCCCCC
Q psy2442 4 KVRFLD---PPEITLRPRNQAVKAGGITSFYCIARGDPIPVIQWRKNGKRVSGTQSRYMVQEFPPGGSLLRIEPVRHARD 80 (111)
Q Consensus 4 ~l~v~~---~p~~~~~~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d 80 (111)
.|.|.. +|.+...+.. .+..|+.++|.|.+.+ +.+.+.|++++..+.......... .......|.|.++.. .|
T Consensus 110 ~l~V~~~~~~p~~~~~~~~-~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~~~~~~~~-~~~~~~~L~i~~v~~-~D 185 (316)
T 3vh8_G 110 VIMVTGNHRKPSLLAHPGP-LVKSGERVILQCWSDI-MFEHFFLHKEGISKDPSRLVGQIH-DGVSKANFSIGPMML-AL 185 (316)
T ss_dssp EEEEECSSCCCEEEEESCS-EEETTCCEEEEEEESS-CCSEEEEEETTCCSCCEEEECEEE-TTEEEEEEEECSCCG-GG
T ss_pred EEEEecCCCCCeEEecCCC-ccCCCCeEEEEEcCCC-CCcEEEEEECCCccccceeeeeec-CCCceEEEEECCCCh-hh
Confidence 455532 4555544444 3789999999999854 556889999887663211111111 000234589999998 99
Q ss_pred CeEEEEEeeeCCCce----EeeEEEEEEec
Q psy2442 81 DAVYECVAENGVGDA----VSAEASLTVYE 106 (111)
Q Consensus 81 ~g~y~c~~~~~~~~~----~~~~~~l~~~~ 106 (111)
+|.|.|.+.|..+.. .+..+.+.|.+
T Consensus 186 ~G~Y~C~a~n~~g~~~~s~~s~~~~l~V~~ 215 (316)
T 3vh8_G 186 AGTYRCYGSVTHTPYQLSAPSDPLDIVVTG 215 (316)
T ss_dssp CEEEEEEEECTTCTTBCCCCCCCEEEEEEC
T ss_pred CceEEEEEecCCCCccccCCCCCEEEEecC
Confidence 999999999976531 13345555544
No 262
>1dr9_A B7-1 (CD80), T lymphocyte activation antigen; IG superfamily, immune system; HET: NAG; 3.00A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1i8l_A*
Probab=99.16 E-value=1.8e-09 Score=59.05 Aligned_cols=76 Identities=14% Similarity=0.278 Sum_probs=49.9
Q ss_pred ecCCcEEEEEEEe-ccCCCeEEEEECCeeccCCCCceEEEeCCCCC-eEEEEccCCCCCCCeEEEEEeeeCCCceEeeEE
Q psy2442 23 KAGGITSFYCIAR-GDPIPVIQWRKNGKRVSGTQSRYMVQEFPPGG-SLLRIEPVRHARDDAVYECVAENGVGDAVSAEA 100 (111)
Q Consensus 23 ~~g~~~~l~c~~~-~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~~~~~d~g~y~c~~~~~~~~~~~~~~ 100 (111)
..|+.+.|.|.+. +.|.|.+.|+++|..+.....++ ....+... .......+.. .|.|.|.|.+.|..+.. +..+
T Consensus 119 ~~g~~~~l~C~~~~g~P~p~i~W~k~g~~l~~~~~~~-~~~~~~~~~~~~~~~~v~~-~d~g~Y~C~a~n~~~~~-s~~~ 195 (201)
T 1dr9_A 119 PTSNIRRIICSTSGGFPEPHLSWLENGEELNAINTTV-SQDPETELYAVSSKLDFNM-TTNHSFMCLIKYGHLRV-NQTF 195 (201)
T ss_dssp SSTTEEEEEEEEEEESSCEEEEEEESSCEECCSEEEE-EECTTTCCEEEEEEEEEET-TSCEEEEEEEEETTCCE-EEEE
T ss_pred CCCCeEEEEEecCCccCCCEEEEEECCEECccccceE-EecCCCcEEEEEEEEEEEe-cCCCEEEEEEecCccee-eeEE
Confidence 3588899999995 88999999999988876431221 11111011 1112334555 79999999999998864 5554
Q ss_pred E
Q psy2442 101 S 101 (111)
Q Consensus 101 ~ 101 (111)
.
T Consensus 196 ~ 196 (201)
T 1dr9_A 196 N 196 (201)
T ss_dssp E
T ss_pred e
Confidence 4
No 263
>4hwn_A FC receptor-like A; FCRLA, FCRL, IG-C2 domain, IG superfamily, immune system, ST genomics, PSI-biology; 2.01A {Homo sapiens}
Probab=99.16 E-value=2.4e-10 Score=57.10 Aligned_cols=86 Identities=17% Similarity=0.251 Sum_probs=57.1
Q ss_pred CCCeeEEcCcceeeecCCcEEEEEEEeccCCC-----eEEEEECCeeccCCCCceEEEeCCCCCeEEEEccCCCCCCCeE
Q psy2442 9 DPPEITLRPRNQAVKAGGITSFYCIARGDPIP-----VIQWRKNGKRVSGTQSRYMVQEFPPGGSLLRIEPVRHARDDAV 83 (111)
Q Consensus 9 ~~p~~~~~~~~~~~~~g~~~~l~c~~~~~~~~-----~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~g~ 83 (111)
.+|.+...+.. .+.+|+.++|.|.....+.. .+.|++++..+.. .. ....|.|..+.. .|+|.
T Consensus 7 ~kP~l~~~p~~-~v~~G~~VtL~C~~~~~~~~~~~~~~~~w~k~g~~l~~-------~~---~~~~l~i~~v~~-~dsG~ 74 (108)
T 4hwn_A 7 PAPILRAVPSA-EPQAGSPMTLSCQTKLPLQRSAARLLFSFYKDGRIVQS-------RG---LSSEFQIPTASE-DHSGS 74 (108)
T ss_dssp CCCEEEEESCS-SCBTTCCEEEEEEC---------CCEEEEEETTEEEEE-------EE---SCCEEEESSCCG-GGCEE
T ss_pred CCCEEEecCCC-cCCCCCcEEEEEcccCCCCCcCcceEEEEEECCcCccC-------CC---cccEEEeCccCc-ccCeE
Confidence 45666655553 57789999999998754433 3889999886531 11 334589999998 99999
Q ss_pred EEEEeeeCCCc--eEeeEEEEEEec
Q psy2442 84 YECVAENGVGD--AVSAEASLTVYE 106 (111)
Q Consensus 84 y~c~~~~~~~~--~~~~~~~l~~~~ 106 (111)
|.|.+.+..+. ..+..+.|.|.+
T Consensus 75 Y~C~~~~~~~~~~~~S~~l~L~V~g 99 (108)
T 4hwn_A 75 YWCEAATEDNQVWKQSPQLEIRVQG 99 (108)
T ss_dssp EEEEEECTTSSSEEECCCEEECCBC
T ss_pred EEEEEEeCCCceeccCCCEEEEEEe
Confidence 99999986542 234455665544
No 264
>2p1y_A Bispecific alpha/beta TCR; autoimmunity, immunoglobulin fold, diabody, immune system; 2.42A {Mus musculus} PDB: 1bwm_A
Probab=99.16 E-value=6.2e-10 Score=62.34 Aligned_cols=80 Identities=16% Similarity=0.232 Sum_probs=56.6
Q ss_pred eeEEcCcceeeecCCcEEEEEEEeccCCCeEEEEECCe--ecc-----------CCCCceEEEe-CCCCCeEEEEccCCC
Q psy2442 12 EITLRPRNQAVKAGGITSFYCIARGDPIPVIQWRKNGK--RVS-----------GTQSRYMVQE-FPPGGSLLRIEPVRH 77 (111)
Q Consensus 12 ~~~~~~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~~~--~~~-----------~~~~~~~~~~-~~~~~~~l~~~~~~~ 77 (111)
.+...+..+.+..|+++.|.|.+.+.+.+.+.|++.+. .+. ....++.... .......|.|.++..
T Consensus 129 ~v~~~p~~~~v~~G~~v~L~C~~~~~p~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~ 208 (238)
T 2p1y_A 129 QVRQSPQSLTVWEGETAILNCSYENSAFDYFPWYQQFPGEGPALLISILSVSDKKEDGRFTIFFNKREKKLSLHIADSQP 208 (238)
T ss_dssp CCEEECSEEEEETTSCEEEEEECCCTTCCEEEEEEECTTSCCEEEEEEETTCSEEEETTEEEEEETTTTEEEEEETTCCG
T ss_pred eEEccCceEEEeCCCeEEEEEEEecCCCCcEEEEEECCCCCCEEEEEEccCCCcccCCceEEEecCCCCeEEEEEcCCCH
Confidence 44555666778899999999999998888999998531 100 0113444331 111235699999998
Q ss_pred CCCCeEEEEEeeeCC
Q psy2442 78 ARDDAVYECVAENGV 92 (111)
Q Consensus 78 ~~d~g~y~c~~~~~~ 92 (111)
.|+|.|.|.+.|..
T Consensus 209 -~D~G~Y~C~a~n~~ 222 (238)
T 2p1y_A 209 -GDSATYFCAAIDTN 222 (238)
T ss_dssp -GGCEEEEEEEEETT
T ss_pred -HHCEEEEEEEeeCC
Confidence 99999999999973
No 265
>3bp6_B Programmed cell death 1 ligand 2; PD-1, PD-L2, complex, costimulation, glycoprotein, immunoglo domain, membrane, transmembrane, receptor; 1.60A {Mus musculus} PDB: 3bp5_B 3rnq_B 3bov_A 3rnk_B
Probab=99.15 E-value=4.5e-10 Score=61.48 Aligned_cols=79 Identities=14% Similarity=0.225 Sum_probs=54.9
Q ss_pred eeecCCcEEEEEEEeccCCCeEEEEECCeeccCCCCceEEEeCCCCCeEEEEccCCCCCCCeEEEEEeeeCCCceEeeEE
Q psy2442 21 AVKAGGITSFYCIARGDPIPVIQWRKNGKRVSGTQSRYMVQEFPPGGSLLRIEPVRHARDDAVYECVAENGVGDAVSAEA 100 (111)
Q Consensus 21 ~~~~g~~~~l~c~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~g~y~c~~~~~~~~~~~~~~ 100 (111)
.+..|+.+.|.|.+.+.|.|.+.|++++..+.. . .....++....+.+..+.. .|.|.|.|.+.|..|.. ....
T Consensus 114 ~~~~g~~v~l~C~~~g~P~p~v~W~~~~~~~~~---~-~~~~~~~~~~~~~i~~v~~-~d~G~Y~C~a~N~~g~~-~~~~ 187 (202)
T 3bp6_B 114 EVPGTGEVQLTCQARGYPLAEVSWQNVSVPANT---S-HIRTPEGLYQVTSVLRLKP-QPSRNFSCMFWNAHMKE-LTSA 187 (202)
T ss_dssp ECTTTCCEEEEEEEEEBSCCEEEETTCCSCCEE---E-EEECTTSCEEEEEEEEECC-CTTCCEEEEEEETTTTE-EEEE
T ss_pred ecCCCCeEEEEEEccccCCceEEEEeCCCCccC---c-eeeCCCCCEEEEEEEEEEc-CCCCEEEEEEEcCCccc-ccEE
Confidence 345799999999999999999999987664321 1 1111111223355667777 89999999999998874 6666
Q ss_pred EEEEe
Q psy2442 101 SLTVY 105 (111)
Q Consensus 101 ~l~~~ 105 (111)
.+.+.
T Consensus 188 ~l~v~ 192 (202)
T 3bp6_B 188 IIDPL 192 (202)
T ss_dssp EECC-
T ss_pred EEEec
Confidence 66553
No 266
>3mj8_L Stimulatory hamster antibody HL4E10 FAB light CHA; hamster IGG, immune system; 2.94A {Cricetulus migratorius} PDB: 3mj9_L*
Probab=99.15 E-value=9.7e-11 Score=64.58 Aligned_cols=91 Identities=16% Similarity=0.300 Sum_probs=59.4
Q ss_pred eeEEec----CCCeeEEcCcceeeecCCcEEEEEEEeccC-C-CeEEEEECCeeccCCCCceEEEeCCC---CCeEEEEc
Q psy2442 3 RKVRFL----DPPEITLRPRNQAVKAGGITSFYCIARGDP-I-PVIQWRKNGKRVSGTQSRYMVQEFPP---GGSLLRIE 73 (111)
Q Consensus 3 ~~l~v~----~~p~~~~~~~~~~~~~g~~~~l~c~~~~~~-~-~~~~w~~~~~~~~~~~~~~~~~~~~~---~~~~l~~~ 73 (111)
++|.|. .+|.+...+....+..|+.++|.|.+.+.+ + +.+.|+++|..+............++ ....|.+.
T Consensus 103 ~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~s~L~i~ 182 (213)
T 3mj8_L 103 TKVTVLGQPNAAPSVTLFPPSSEELKTNQATLVCMINGFYPADVAVTWEADGTPITQGVKTTQPSKSDSKYMATSYLTMT 182 (213)
T ss_dssp EEEEEECSCCBCCEEEEECCCHHHHTTTEEEEEEEEEEEBSSCCEEEEEETTEEECTTEEECCCEEETTEEEEEEEEEEE
T ss_pred eEEEEeCCCCCCCeEEccCCCcccccCCcEEEEEEeeceeCCCeEEEEEcCCcccCCCcccCCcCccCCcEEEEEEEEEe
Confidence 456666 566666555444455899999999998853 3 38999999998753210000000000 11337788
Q ss_pred cCCCCCCCeEEEEEeeeCCCc
Q psy2442 74 PVRHARDDAVYECVAENGVGD 94 (111)
Q Consensus 74 ~~~~~~d~g~y~c~~~~~~~~ 94 (111)
.+.. .|.|.|.|.+.|..+.
T Consensus 183 ~~~~-~d~G~Y~C~a~n~~~~ 202 (213)
T 3mj8_L 183 ADAW-KSRNTFICKVTHGGNT 202 (213)
T ss_dssp SHHH-HSCSCEEEEEEETTEE
T ss_pred HHHc-CCCCEEEEEEEECCcc
Confidence 8877 8999999999998754
No 267
>1xau_A B- and T-lymphocyte attenuator; IG domain, beta sandwich, structural genomics, PSI, protein structure initiative; 1.80A {Mus musculus} SCOP: b.1.1.4
Probab=99.15 E-value=2.4e-09 Score=53.05 Aligned_cols=86 Identities=16% Similarity=0.220 Sum_probs=57.6
Q ss_pred eeeecCCcEEEEEEEec-cCCCeEEEEECCe----eccCCCC-ceEEEeC-CCCCeEEEEccCCCCCCCeEEEEEeeeCC
Q psy2442 20 QAVKAGGITSFYCIARG-DPIPVIQWRKNGK----RVSGTQS-RYMVQEF-PPGGSLLRIEPVRHARDDAVYECVAENGV 92 (111)
Q Consensus 20 ~~~~~g~~~~l~c~~~~-~~~~~~~w~~~~~----~~~~~~~-~~~~~~~-~~~~~~l~~~~~~~~~d~g~y~c~~~~~~ 92 (111)
..+..|+.+.|.|.+.+ .+.|.+.|.+.+. .+..... +...... +-....|.|.++.. +|+|.|.|.+.+..
T Consensus 24 ~tv~~G~~~~LeCpv~yc~~rPnVtWcK~~~~~c~~L~~~~q~~~~w~e~~n~s~fiL~f~~V~~-sDsG~YrCsAn~~~ 102 (122)
T 1xau_A 24 HSAWTGELFKIECPVKYCVHRPNVTWCKHNGTIWVPLEVGPQLYTSWEENRSVPVFVLHFKPIHL-SDNGSYSCSTNFNS 102 (122)
T ss_dssp EEECTTSCEEEEEEEECSSSCCCEEEEEECSSSEEECCCBTTEEEEEECSSSSCEEEEEETTCCG-GGCEEEEEEEEETT
T ss_pred EEEecCCeEEEEeEecCCCCCCcEEEEecCCeeccccccceeeecceeccCCceeEEEEEeeEEE-cCCccEEEEeeCCC
Confidence 46788999999999955 6788999998653 2211111 1112111 11223588999998 99999999999988
Q ss_pred CceEeeEEEEEEec
Q psy2442 93 GDAVSAEASLTVYE 106 (111)
Q Consensus 93 ~~~~~~~~~l~~~~ 106 (111)
|...+....|.|-+
T Consensus 103 g~ieSHs~ti~V~~ 116 (122)
T 1xau_A 103 QVINSHSVTIHVRE 116 (122)
T ss_dssp EEEECCCEEEEEC-
T ss_pred CceeeeEEEEEEEe
Confidence 76556666665543
No 268
>3moq_A NEW antigen receptor variable domain, P3(40) PEPT amyloid beta A4 protein; AB-ignar, AB-12Y-2, glycoprotein, membran protease inhibitor; 2.05A {Orectolobus maculatus} PDB: 2z8w_C 2z8v_C 1ves_A 1ver_A
Probab=99.15 E-value=2.1e-09 Score=55.18 Aligned_cols=80 Identities=21% Similarity=0.355 Sum_probs=55.9
Q ss_pred eeEEcCcceeeecCCcEEEEEEEecc--CCCeEEEEEC--Cee---ccCCCCceEEEeCC-CCCeEEEEccCCCCCCCeE
Q psy2442 12 EITLRPRNQAVKAGGITSFYCIARGD--PIPVIQWRKN--GKR---VSGTQSRYMVQEFP-PGGSLLRIEPVRHARDDAV 83 (111)
Q Consensus 12 ~~~~~~~~~~~~~g~~~~l~c~~~~~--~~~~~~w~~~--~~~---~~~~~~~~~~~~~~-~~~~~l~~~~~~~~~d~g~ 83 (111)
.+.+.+..+.+.+|++++|.|...+. +...+.|++. +.. +.....|+...... .....|.|.+++. +|+|.
T Consensus 2 ~V~Q~p~~v~v~~G~svtL~C~~s~~~~~~~~v~Wyrq~~g~~~~~li~~~~R~~~~~~~~~~~~sL~I~~v~~-~DsG~ 80 (126)
T 3moq_A 2 WVDQTPRTATKETGESLTINCVLRDASFELKDTGWYRTKLGSTNEQSISIGGRYVETVNKGSKSFSLRISDLRV-EDSGT 80 (126)
T ss_dssp EEEEECSEEEEETTCCEEEEEEEESCSSCCCEEEEEEEETTCCCCEECCCBTTEEEEEETTTTEEEEEECSCCG-GGCEE
T ss_pred ceEECCceEEEeCCCCEEEEEEeecCccCCceEEEEEeCCCCCceEEEEeCCcEEEEEeCCCCEEEEEECcCCh-HhCEE
Confidence 34566777889999999999998765 4567999984 222 11122455543221 2345599999998 99999
Q ss_pred EEEEeeeCC
Q psy2442 84 YECVAENGV 92 (111)
Q Consensus 84 y~c~~~~~~ 92 (111)
|.|.+.+..
T Consensus 81 Y~C~~~~~~ 89 (126)
T 3moq_A 81 YKCQAFYVF 89 (126)
T ss_dssp EEEEEEEEE
T ss_pred EEEEEEEcC
Confidence 999987743
No 269
>3kg5_A B-cell antigen receptor complex-associated protei chain; CD79B, IG-beta, BCR, immunoglobulin domain, protein binding; 3.20A {Homo sapiens}
Probab=99.15 E-value=5.1e-09 Score=54.27 Aligned_cols=95 Identities=18% Similarity=0.202 Sum_probs=62.6
Q ss_pred eeEEcCcceeeecCCcEEEEEEEeccCCCeEEEEEC---Ceecc---CCCCceEEEeCCCCCeEEEEccCCCCCCCeEEE
Q psy2442 12 EITLRPRNQAVKAGGITSFYCIARGDPIPVIQWRKN---GKRVS---GTQSRYMVQEFPPGGSLLRIEPVRHARDDAVYE 85 (111)
Q Consensus 12 ~~~~~~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~---~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~d~g~y~ 85 (111)
.+.+.+..+.+.+|++++|.|...+. ...+.|++. +..+. ....++...... ....|.|.+++. +|+|.|.
T Consensus 20 ~v~Q~p~~~~v~~G~svtL~C~~s~~-~~~v~Wyrq~~~g~~~~~l~~~~~rf~~~~~~-~~~~L~I~~~~~-~Dsg~Y~ 96 (134)
T 3kg5_A 20 RIWQSPRFIARKRGFTVKMHCYMNSA-SGNVSWLWKQEMDENPQQLKLEKGRMEESQNE-SLATLTIQGIRF-EDNGIYF 96 (134)
T ss_dssp CCEEECSEEEEETTCCEEEEEECCCT-TCCCEEEEESSSSSCCEECCCCTTTEEEEECS-SEEEEEECSCCT-TTCEEEE
T ss_pred EEEEeCCEEEEeCCCCEEEEEEECCC-CceEEEEEECCCCCCcEEEEEECCeEEEEccC-CEEEEEECCCCc-CcCEEEE
Confidence 44566777889999999999998765 467899986 33221 123566554322 445599999998 9999999
Q ss_pred EEeeeCCC-c-eEeeEEEEEEecCCC
Q psy2442 86 CVAENGVG-D-AVSAEASLTVYEGEE 109 (111)
Q Consensus 86 c~~~~~~~-~-~~~~~~~l~~~~~~~ 109 (111)
|.+.+..+ . .......|.|.+.|.
T Consensus 97 C~~~~~~~~~~~fg~GT~L~V~~~p~ 122 (134)
T 3kg5_A 97 CQQKCNNTSEVYQGCGTELRVMGFST 122 (134)
T ss_dssp EEEECTTTCCEEECCCEEEEEECC--
T ss_pred EEEEcCCCCceEECCCEEEEEecCCC
Confidence 99887521 1 112234566665543
No 270
>2pet_A Lutheran blood group glycoprotein; immunoglobulin superfamily., cell adhesion; 1.70A {Homo sapiens} PDB: 2pf6_A
Probab=99.15 E-value=6.2e-10 Score=61.92 Aligned_cols=88 Identities=20% Similarity=0.387 Sum_probs=57.9
Q ss_pred eeEEecCC---CeeEEcCcceeeecCCcE-EEEEEE-eccCCCeEEEEECCeeccCCC---CceEEEeC---CCCC----
Q psy2442 3 RKVRFLDP---PEITLRPRNQAVKAGGIT-SFYCIA-RGDPIPVIQWRKNGKRVSGTQ---SRYMVQEF---PPGG---- 67 (111)
Q Consensus 3 ~~l~v~~~---p~~~~~~~~~~~~~g~~~-~l~c~~-~~~~~~~~~w~~~~~~~~~~~---~~~~~~~~---~~~~---- 67 (111)
+.|.|..+ |.+...+....+..|+.+ .|.|.+ .+.|.+.+.|++++..+.... .++.+... ....
T Consensus 108 ~~l~V~~~p~~~~~~~~~~~~~~~~g~~~~~l~C~~~~~~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 187 (231)
T 2pet_A 108 ARLNVFAKPEATEVSPNKGTLSVMEDSAQEIATCNSRNGNPAPKITWYRNGQRLEVPVEMNPEGYMTSRTVREASGLLSL 187 (231)
T ss_dssp EEEEEEBCCCCCEEEECCSSCCTTCCSEEEEEEEEEEEEBSCCEEEEEETTEECCCCSSCCSSEEEEEEEEECTTSCEEE
T ss_pred EEEEEEecCCCcEEecCCcceeecCCCceEEEEEEeECcccCCEEEEEECCccCccccccccceeecceeEecCCCeEEE
Confidence 35666655 344444555566788887 999999 889999999999999886543 23332210 0011
Q ss_pred -eEEEEccCCCCCCCeEEEEEeeeC
Q psy2442 68 -SLLRIEPVRHARDDAVYECVAENG 91 (111)
Q Consensus 68 -~~l~~~~~~~~~d~g~y~c~~~~~ 91 (111)
..|.+..... .|.|.|.|.+.|.
T Consensus 188 ~~~L~i~~~~~-dd~g~Y~C~a~n~ 211 (231)
T 2pet_A 188 TSTLYLRLRKD-DRDASFHCAAHYS 211 (231)
T ss_dssp EEEEEEECCGG-GGGCEEEEEEEEE
T ss_pred EEEEEEecchh-hCCceEEEEEEcC
Confidence 3366654443 4599999999994
No 271
>3u6r_L Antibody 1:7 (light chain); IG-like domain, neutralizing single chain FV, immune system; 2.67A {Homo sapiens}
Probab=99.14 E-value=9e-10 Score=57.70 Aligned_cols=77 Identities=19% Similarity=0.315 Sum_probs=54.5
Q ss_pred eEEcCcceeeecCCcEEEEEEEeccCCCeEEEEECC--ee---c-c-------CCCCceEEEeCCCCCeEEEEccCCCCC
Q psy2442 13 ITLRPRNQAVKAGGITSFYCIARGDPIPVIQWRKNG--KR---V-S-------GTQSRYMVQEFPPGGSLLRIEPVRHAR 79 (111)
Q Consensus 13 ~~~~~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~~--~~---~-~-------~~~~~~~~~~~~~~~~~l~~~~~~~~~ 79 (111)
+.+.+..+.+.+|++++|.|.........+.|++.. .. + . ....|+...... ....|.|.+++. +
T Consensus 3 v~Q~p~~v~v~~G~~vtL~C~~s~~~~~~v~Wyrq~~g~~~~~li~~~~~~~~~~~~Rfs~~~~~-~~~sL~I~~l~~-~ 80 (143)
T 3u6r_L 3 LTQSPATLSLSPGERATLSCRASQSVNKYLAWYQQKPGQAPRLLIYDASNRATGIPARFSGSGSG-TDFTLTISNLEP-E 80 (143)
T ss_dssp EEEECSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEET-TEEEEEECSCCG-G
T ss_pred EEECCCEEEEeCCCCEEEEEEECCCCceeeEEEEECCCCCCEEEEEeCCccCCCccCcEeEEccC-CEEEEEEccCcc-c
Confidence 455666778999999999999877666689999842 11 1 0 112455544222 344599999998 9
Q ss_pred CCeEEEEEeeeC
Q psy2442 80 DDAVYECVAENG 91 (111)
Q Consensus 80 d~g~y~c~~~~~ 91 (111)
|+|.|.|.+.+.
T Consensus 81 DsG~Y~C~~~~~ 92 (143)
T 3u6r_L 81 DFAVYYCQQRSD 92 (143)
T ss_dssp GCEEEEEEECSS
T ss_pred CCEEEEEEEecC
Confidence 999999998764
No 272
>3rrq_A Protein PD-1, programmed cell death protein 1; programmed death-1, costimulatory, immune system; 2.10A {Homo sapiens}
Probab=99.14 E-value=9.2e-10 Score=56.67 Aligned_cols=93 Identities=22% Similarity=0.317 Sum_probs=60.1
Q ss_pred EEcCcceeeecCCcEEEEEEEeccC-CCeEEEEEC--Cee---c-c--C------CCCceEEEeC-CCCCeEEEEccCCC
Q psy2442 14 TLRPRNQAVKAGGITSFYCIARGDP-IPVIQWRKN--GKR---V-S--G------TQSRYMVQEF-PPGGSLLRIEPVRH 77 (111)
Q Consensus 14 ~~~~~~~~~~~g~~~~l~c~~~~~~-~~~~~w~~~--~~~---~-~--~------~~~~~~~~~~-~~~~~~l~~~~~~~ 77 (111)
.+.+..+.+..|++++|.|...+.. ...+.|++. +.. + . . ...|+..... ......|.|.+++.
T Consensus 5 ~Q~P~~~~v~~G~~vtL~C~~s~~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~~Rf~~~~~~~~~~~sL~I~~~~~ 84 (129)
T 3rrq_A 5 TFSPALLVVTEGDNATFTCSFSNTSESFVLNWYRMSPSNQTDKLAAFPEDRSQPGQDCRFRVTQLPNGRDFHMSVVRARR 84 (129)
T ss_dssp EEECSEEEEETTSCEEEEEECCCCC-CEEEEEEEEESTTSCEEEEEETC--------CCEEEEECTTSSEEEEEESSCCG
T ss_pred EECCCEEEEeCCCCEEEEeEecCCCCCcEEEEeEeCCCCCccEEEEEcCCccCCCcCCcEEEEEcCCCCEEEEEECCCCh
Confidence 4566778899999999999987654 347899873 211 1 0 0 1235555432 22334599999998
Q ss_pred CCCCeEEEEEeeeCCCce---EeeEEEEEEecC
Q psy2442 78 ARDDAVYECVAENGVGDA---VSAEASLTVYEG 107 (111)
Q Consensus 78 ~~d~g~y~c~~~~~~~~~---~~~~~~l~~~~~ 107 (111)
+|+|.|.|.+.+..+.. ......|.|.+.
T Consensus 85 -~Dsg~Y~C~~~~~~~~~~~~~s~~~~L~V~~~ 116 (129)
T 3rrq_A 85 -NDSGTYLCGAISLAPKLQIKESLRAELRVTER 116 (129)
T ss_dssp -GGCEEEEEEEEECGGGCEEEECCCEEEEEECC
T ss_pred -hHCEEEEEEEEecCCCceeeEeceEEEEEecC
Confidence 99999999998865431 123456666543
No 273
>2o26_X MAST/stem cell growth factor receptor; stem cell factor, receptor tyrosine kinase, class III, recep ligand complex, cytokine, 4-helix bundle; HET: NAG FUL MAN NDG; 2.50A {Mus musculus}
Probab=99.14 E-value=6.5e-10 Score=63.90 Aligned_cols=96 Identities=17% Similarity=0.111 Sum_probs=67.3
Q ss_pred eeEEecCCCeeEEcCcceeeecCCcEEEEEEEeccCC-CeEEEE-ECCeeccCCCCceEEEeCCCCCeEEEEccCCCCCC
Q psy2442 3 RKVRFLDPPEITLRPRNQAVKAGGITSFYCIARGDPI-PVIQWR-KNGKRVSGTQSRYMVQEFPPGGSLLRIEPVRHARD 80 (111)
Q Consensus 3 ~~l~v~~~p~~~~~~~~~~~~~g~~~~l~c~~~~~~~-~~~~w~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d 80 (111)
+.|.|..+|.....+....+..|+.+.|.|.+.+ |. +.+.|+ +++..+... .++... ....|.+.++.. .|
T Consensus 84 ~~l~V~~~~~~~~~~~~~~~~~g~~v~l~C~~~~-p~~~~v~W~~~~g~~l~~~-~~~~~~----~~~~L~i~~v~~-~d 156 (290)
T 2o26_X 84 IYVFVRDPAKLFLVGLPLFGKEDSDALVRCPLTD-PQVSQYSLIECDGKSLPTD-LTFVPN----PKAGITIKNVKR-AY 156 (290)
T ss_dssp EEEEEECSSCCBCCCCCEEEETTSCEEECCCBSC-CSCEEEEEEETTSCCCCTT-CEEEEE----TTTEEEEESCCG-GG
T ss_pred EEEEEeCCCcccccccceEEecCCeEEEeCcCCC-CCCceEEEEeCCCcCCCCC-CceeeC----CCCCEEEecccH-HH
Confidence 4677777666555555677889999999999886 66 789995 566655432 344333 234589999998 99
Q ss_pred Ce-EEEEEeeeCCCceEeeEEEEEEe
Q psy2442 81 DA-VYECVAENGVGDAVSAEASLTVY 105 (111)
Q Consensus 81 ~g-~y~c~~~~~~~~~~~~~~~l~~~ 105 (111)
.| .|.|.+.|..+...+..+.+.+.
T Consensus 157 ~G~~Y~C~a~n~~~~~~s~~~~l~V~ 182 (290)
T 2o26_X 157 HRLCVRCAAQRDGTWLHSDKFTLKVR 182 (290)
T ss_dssp TTCEEEEEEEETTEEEECCCEEEEEE
T ss_pred CCCEEEEEEEECCceEEeEEEEEEEE
Confidence 99 99999999854422334556554
No 274
>1z7z_I Intercellular adhesion molecule-1; ICAM-1,kilifi,CD54,human coxsackievirus A21, cryo-electron microscopy,virus-receptor complex, icosahedral virus; HET: NAG NDG; 8.00A {Homo sapiens} SCOP: b.1.1.3 b.1.1.3 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.14 E-value=4.6e-10 Score=68.13 Aligned_cols=85 Identities=15% Similarity=0.167 Sum_probs=63.5
Q ss_pred eeEEecCCCeeE-EcCcceeeecCCcEEEEEEEeccCCC---eEEEEECCeeccCCCCceEEEeCCCCCeEEEEccCCCC
Q psy2442 3 RKVRFLDPPEIT-LRPRNQAVKAGGITSFYCIARGDPIP---VIQWRKNGKRVSGTQSRYMVQEFPPGGSLLRIEPVRHA 78 (111)
Q Consensus 3 ~~l~v~~~p~~~-~~~~~~~~~~g~~~~l~c~~~~~~~~---~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 78 (111)
+.|.|..+|.+. ..+....+..|+.+.|.|.+.+.+++ .+.|++++..+.... .. .......|.|..+..
T Consensus 78 ~~l~V~~~P~~~~~~~~~~~v~~G~~v~L~C~~~g~~~~~~~~v~W~k~g~~l~~~~-~~----~~~~~~~L~i~~~~~- 151 (450)
T 1z7z_I 78 TFLTVYWTPERVELAPLPSWQPVGKNLTLRCQVEGGAPRANLTVVLLRGEKELKREP-AV----GEPAEVTTTVLVRRD- 151 (450)
T ss_dssp CEEEEEBCCSEEEECCCCSEECTTSEEEEEEEEECCBCGGGEEEEEEETTEEEEEEE-CC----TTTEEEEEEEECCSS-
T ss_pred EEEEEEeCCCcceecCCCceEeeCCeEEEEEEecCCCCCcCcEEEEeeCCEEeeccc-cc----ccccceEEEEEeecc-
Confidence 467777777665 45565678899999999999998887 899999988774321 00 011224588888887
Q ss_pred CCCeEEEEEeeeCCC
Q psy2442 79 RDDAVYECVAENGVG 93 (111)
Q Consensus 79 ~d~g~y~c~~~~~~~ 93 (111)
.|.|.|.|.+.|..|
T Consensus 152 ~d~G~Y~C~a~n~~g 166 (450)
T 1z7z_I 152 HHGANFSCRTELDLR 166 (450)
T ss_dssp CSSCEEEEEEEEECG
T ss_pred ccCceEEEEEEcccC
Confidence 899999999998765
No 275
>3jz7_A MCAR, CAR, coxsackievirus and adenovirus receptor homolog; cell adhesion molecule, immunoglobuline superfamily, alternative splicing, cell adhesion; 2.19A {Mus musculus} PDB: 3mj7_B* 2npl_X
Probab=99.14 E-value=4.1e-10 Score=61.80 Aligned_cols=92 Identities=17% Similarity=0.227 Sum_probs=63.3
Q ss_pred CcceeeecCCcEEEEEEEeccC----CCeEEEEEC----------------CeeccC----CCCceEEEeC--CCCCeEE
Q psy2442 17 PRNQAVKAGGITSFYCIARGDP----IPVIQWRKN----------------GKRVSG----TQSRYMVQEF--PPGGSLL 70 (111)
Q Consensus 17 ~~~~~~~~g~~~~l~c~~~~~~----~~~~~w~~~----------------~~~~~~----~~~~~~~~~~--~~~~~~l 70 (111)
+..+.+..|+.+.|.|...+.+ .+.+.|++. +..... ...++..... ......|
T Consensus 7 ~~~v~v~~G~~v~L~C~~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L 86 (214)
T 3jz7_A 7 EQRIEKAKGETAYLPCKFTLSPEDQGPLDIEWLISPSDNQIVDQVIILYSGDKIYDNYYPDLKGRVHFTSNDVKSGDASI 86 (214)
T ss_dssp EEEEEEETTSCEEECCBCCCCTTCCSCCEEEEEEEESSSSCCSEEEEEEETTEEECCCCGGGTTTEEESCSCGGGTBCCE
T ss_pred CceEEEecCCCEEEEEEEecCCCCCCcEEEEEEecCCCCCCCceEEEEEeCCeEccccCCccccceEEeccCccCCcccE
Confidence 3456788999999999988766 458999873 332221 0133333210 0123448
Q ss_pred EEccCCCCCCCeEEEEEeeeCCCceEeeEEEEEEecCCCC
Q psy2442 71 RIEPVRHARDDAVYECVAENGVGDAVSAEASLTVYEGEEK 110 (111)
Q Consensus 71 ~~~~~~~~~d~g~y~c~~~~~~~~~~~~~~~l~~~~~~~~ 110 (111)
.|.++.. .|+|.|.|.+.|..+.. ...+.|.|..+|..
T Consensus 87 ~i~~v~~-~D~G~Y~C~~~~~~~~~-~~~~~l~V~~~p~~ 124 (214)
T 3jz7_A 87 NVTNLQL-SDIGTYQCKVKKAPGVA-NKKFLLTVLVKPSG 124 (214)
T ss_dssp EECSCCG-GGCEEEEEEEEETTEEE-EEEEEEEEECCCBS
T ss_pred EEccCCh-hhCeEEEEEEEeCCCcc-ccEEEEEEEcCCCC
Confidence 9999998 99999999999987764 77778888776643
No 276
>2fbo_J V1V2;, variable region-containing chitin-binding protein 3; immunoglobulin, VCBP, V-type, V SET, immune system; 1.85A {Branchiostoma floridae}
Probab=99.14 E-value=4.8e-10 Score=63.04 Aligned_cols=89 Identities=22% Similarity=0.261 Sum_probs=60.2
Q ss_pred cCcceeeecCCcEEEEEEEec---cCCCeEEEEECCeec-----------------------------cCCCCceEEEeC
Q psy2442 16 RPRNQAVKAGGITSFYCIARG---DPIPVIQWRKNGKRV-----------------------------SGTQSRYMVQEF 63 (111)
Q Consensus 16 ~~~~~~~~~g~~~~l~c~~~~---~~~~~~~w~~~~~~~-----------------------------~~~~~~~~~~~~ 63 (111)
++..+.+..|+.+.|.|.+.+ .+.+.+.|++++... .....+..+..
T Consensus 8 ~~~~v~v~~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~- 86 (250)
T 2fbo_J 8 THTEVEVHAGGTVELPCSYQLANDTQPPVISWLKGASPDRSTKVFKGNYNWQGEGLGFVESDSYKESFGDFLGRASVAN- 86 (250)
T ss_dssp SCSEEEECTTSCEEECCEEEECSCCSCCEEEEEEEEETTEEEEEEEEEECCCBTTBCCCTTSEEEEECGGGTTTEECSC-
T ss_pred CCCceEEecCCeEEEEEEeEcCCCCCceEEEEEeCCCCCccEEEEeeccccccccccccccccccccCCCcCceEEecc-
Confidence 344568889999999999987 777899999876432 00112222211
Q ss_pred CCCCeEEEEccCCCCCCCeEEEEEeeeCCCce----EeeEEEEEEecC
Q psy2442 64 PPGGSLLRIEPVRHARDDAVYECVAENGVGDA----VSAEASLTVYEG 107 (111)
Q Consensus 64 ~~~~~~l~~~~~~~~~d~g~y~c~~~~~~~~~----~~~~~~l~~~~~ 107 (111)
+ ....|.|.++.. .|+|.|.|.+.+..+.. ....+.|.|..+
T Consensus 87 ~-~~~~L~I~~v~~-~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~ 132 (250)
T 2fbo_J 87 L-AAPTLRLTHVHP-QDGGRYWCQVAQWSIRTEFGLDAKSVVLKVTGH 132 (250)
T ss_dssp T-TSCCEEECSCCG-GGCEEEEEEEECTTCCSGGGEEEEEEEEEETTT
T ss_pred C-CcceEEEeeCCh-hhCeEEEEEeccCccCCcccccceeEEEEEecc
Confidence 0 123599999998 99999999999876532 133666776654
No 277
>4dkd_C Macrophage colony-stimulating factor 1 receptor; dimeric four-helix bundle cytokine, receptor tyrosine kinase glycosylation; HET: NAG BMA; 3.00A {Homo sapiens}
Probab=99.14 E-value=2.4e-10 Score=65.64 Aligned_cols=99 Identities=14% Similarity=0.137 Sum_probs=66.9
Q ss_pred eeEEecCCCee-EEcCcceeeecCCcEEEEEEEeccCC-CeEEEEECCeeccCCCCceEEEeCCCCCeEEEEccCCCCCC
Q psy2442 3 RKVRFLDPPEI-TLRPRNQAVKAGGITSFYCIARGDPI-PVIQWRKNGKRVSGTQSRYMVQEFPPGGSLLRIEPVRHARD 80 (111)
Q Consensus 3 ~~l~v~~~p~~-~~~~~~~~~~~g~~~~l~c~~~~~~~-~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d 80 (111)
+.|.|..++.. ...+....+..|+.+.|.|.+.+... +.+.|++.+........++... ....|.|.++.. .|
T Consensus 81 ~~l~V~~~~~~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~----~~~~L~i~~~~~-~d 155 (292)
T 4dkd_C 81 IHLYVKDPARPWNVLAQEVVVFEDQDALLPCLLTDPVLEAGVSLVRVRGRPLMRHTNYSFS----PWHGFTIHRAKF-IQ 155 (292)
T ss_dssp ECCEECCSSCCEEESCSEEEEETTSCEECCEEESSGGGGSSEEEEEGGGCCCCSSCCEECC----SSSCCEETTCCG-GG
T ss_pred EEEEEcCccccccccCCeEEEcCCCcEEEeeeCCCCCcceeEEEEecCCCccccCCccccc----CCceEEECCCCH-HH
Confidence 35666666653 44556677889999999999987332 6899998743332222333322 222388999998 99
Q ss_pred CeEEEEEeeeCCCceEeeEEEEEEec
Q psy2442 81 DAVYECVAENGVGDAVSAEASLTVYE 106 (111)
Q Consensus 81 ~g~y~c~~~~~~~~~~~~~~~l~~~~ 106 (111)
.|.|.|.+.|..+......+.|.|..
T Consensus 156 ~G~Y~C~a~n~~~~~~s~~~~l~V~~ 181 (292)
T 4dkd_C 156 SQDYQCSALMGGRKVMSISIRLKVQK 181 (292)
T ss_dssp CSEEEEEECSTTSCEECCCEEEEEEC
T ss_pred CeEEEEEEEeCCCceeEEEEEEEEeC
Confidence 99999999987765434466676664
No 278
>1ccz_A Protein (CD58); LFA-3, glycoprotein; HET: NAG; 1.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1ci5_A 1qa9_B
Probab=99.14 E-value=2.7e-10 Score=61.26 Aligned_cols=84 Identities=21% Similarity=0.244 Sum_probs=58.9
Q ss_pred eeeecCCcEEEEEEEeccCCCeEEEEECCeeccC-----------CCCceEEEeCCCCCeEEEEccCCCCCCCeEEEEEe
Q psy2442 20 QAVKAGGITSFYCIARGDPIPVIQWRKNGKRVSG-----------TQSRYMVQEFPPGGSLLRIEPVRHARDDAVYECVA 88 (111)
Q Consensus 20 ~~~~~g~~~~l~c~~~~~~~~~~~w~~~~~~~~~-----------~~~~~~~~~~~~~~~~l~~~~~~~~~d~g~y~c~~ 88 (111)
+.+..|+.++|.|.... +.+.+.|++.+..+.. ...|+.+.. ....|.|.++.. .|+|.|.|.+
T Consensus 5 v~~~~G~~VtL~c~~~~-~~~~i~W~~~~~~i~~~~~~~~~~~~~~~~R~~~~~---~~~sL~I~~v~~-~DsG~Y~C~~ 79 (171)
T 1ccz_A 5 IYGVVYGNVTFHVPSNV-PLKEVLWKKQKDKVAELENSEFRAFSSFKNRVYLDT---VSGSLTIYNLTS-SDEDEYEMES 79 (171)
T ss_dssp EEEETTCCEEECCCCSS-CCSCEEEEETTEEEEEEETTEEEECGGGTTSEEECT---TTCCEEECSCCG-GGCEEEEEEC
T ss_pred EEEEcCCCEEEcCCCCC-CcceEEEEeCCcEEEEEcCCCcccccccCCcEEEeC---CCCeEEECCCCh-hhCceEEEEE
Confidence 56788999999998844 7779999998764321 012333221 234499999998 9999999999
Q ss_pred eeCCCceEeeEEEEEEecCCCCC
Q psy2442 89 ENGVGDAVSAEASLTVYEGEEKP 111 (111)
Q Consensus 89 ~~~~~~~~~~~~~l~~~~~~~~p 111 (111)
.|..+ ...+.|.|..++..|
T Consensus 80 ~n~~~---~~~~~L~V~~~~~~p 99 (171)
T 1ccz_A 80 PNITD---TMKFFLYVLEMVSKP 99 (171)
T ss_dssp TTCCS---CEEEEEEEECCCCCC
T ss_pred eCCCC---cEEEEEEEECcCCCC
Confidence 88765 455667777665443
No 279
>3auv_A SC-DSFV derived from the G6-FAB; SC-DSFV (disulfide-stabilized SCFV), SCFV, monovalent antibo antibody engineering, immune system; 2.40A {Homo sapiens} PDB: 2kh2_B 3iy0_L
Probab=99.13 E-value=1.1e-09 Score=62.88 Aligned_cols=82 Identities=20% Similarity=0.279 Sum_probs=59.1
Q ss_pred CCeeEEcCcceeeecCCcEEEEEEEeccCCCeEEEEECCe-----ecc--------CCCCceEEEeCCCCCeEEEEccCC
Q psy2442 10 PPEITLRPRNQAVKAGGITSFYCIARGDPIPVIQWRKNGK-----RVS--------GTQSRYMVQEFPPGGSLLRIEPVR 76 (111)
Q Consensus 10 ~p~~~~~~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~~~-----~~~--------~~~~~~~~~~~~~~~~~l~~~~~~ 76 (111)
.+.+...+..+.+..|++++|.|...+.+.+.+.|++.+. .+. ....++...... ....|.|.++.
T Consensus 12 ~~~v~~~p~~~~v~~G~~v~L~C~~~~~p~~~i~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~-~~~~L~I~~v~ 90 (276)
T 3auv_A 12 DIQMTQSPSSLSASVGDRVTITCRASQDVSTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSGSG-TDFTLTISSLQ 90 (276)
T ss_dssp CCCEEEECSEEECCTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEET-TEEEEEESSCC
T ss_pred ceeEEeCCCeEEEcCCCCEEEEeEcCCCCCCcEEEEEECCCCCCEEEEEEcCccCCCCCCCEEEeccC-CeEEEEEccCC
Confidence 3455666777889999999999999988888999998532 110 112455544211 33459999999
Q ss_pred CCCCCeEEEEEeeeCCC
Q psy2442 77 HARDDAVYECVAENGVG 93 (111)
Q Consensus 77 ~~~d~g~y~c~~~~~~~ 93 (111)
. .|+|.|.|.+.|..+
T Consensus 91 ~-~DsG~Y~C~~~n~~~ 106 (276)
T 3auv_A 91 P-EDFATYYCQQHYTTP 106 (276)
T ss_dssp G-GGCEEEEEEECSSSS
T ss_pred h-hhCEEEEEEEecCCc
Confidence 8 999999999988643
No 280
>1jbj_A CD3 epsilon and gamma ectodomain fragment complex; beta-sheet, C2-SET immunoglobulin superfamily, H-bonded G strand PAIR, single-chain; NMR {Mus musculus} SCOP: b.1.1.4 b.1.1.4 PDB: 1xmw_A
Probab=99.13 E-value=2.9e-10 Score=61.81 Aligned_cols=67 Identities=15% Similarity=0.265 Sum_probs=51.4
Q ss_pred eeecCCcEEEEEEEeccCCCeEEEEECCeeccCCCCceEEEeCCCCCeEEEEcc-CCCCCCCeEEEEEeeeCCCceEeeE
Q psy2442 21 AVKAGGITSFYCIARGDPIPVIQWRKNGKRVSGTQSRYMVQEFPPGGSLLRIEP-VRHARDDAVYECVAENGVGDAVSAE 99 (111)
Q Consensus 21 ~~~~g~~~~l~c~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~d~g~y~c~~~~~~~~~~~~~ 99 (111)
....|+.+.|.|.+.+ +. .+.|+++|..+... ....|.|.+ +.. .|+|.|.|.+.|..|.. ...
T Consensus 10 v~~~G~~v~L~C~~~~-~~-~i~W~k~g~~l~~~-----------~~~~L~I~~~~~~-~D~G~Y~C~a~n~~g~~-~~~ 74 (186)
T 1jbj_A 10 VSISGTSVELTCPLDS-DE-NLKWEKNGQELPQK-----------HDKHLVLQDFSEV-EDSGYYVCYTPASNKNT-YLY 74 (186)
T ss_dssp EEEETTEEEEECSSCC-CT-TCEEEETTEEECSC-----------CCSEEEEESCCTT-TSCEEEEEECSSCCCCC-CEE
T ss_pred EEeCCcEEEEEEeCCC-CC-ceEEEECCEECCCC-----------CCCEEEECCCCcc-ccCEEEEEEEEeCCCcE-EEE
Confidence 4467999999999877 43 59999999987642 123488899 888 99999999999987752 444
Q ss_pred EEE
Q psy2442 100 ASL 102 (111)
Q Consensus 100 ~~l 102 (111)
+.+
T Consensus 75 ~~~ 77 (186)
T 1jbj_A 75 LKA 77 (186)
T ss_dssp ECC
T ss_pred EEE
Confidence 444
No 281
>1wio_A CD4, T-cell surface glycoprotein CD4; immunoglobulin fold, transmembrane, MHC lipoprotein, polymorphism; 3.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1 b.1.1.3 b.1.1.3 PDB: 1wip_A 1wiq_A 3t0e_E
Probab=99.13 E-value=9.7e-10 Score=65.13 Aligned_cols=86 Identities=13% Similarity=0.019 Sum_probs=61.7
Q ss_pred cceeeecCCcEEEEEEEec-----cCCCeEEEEECCeeccCC-------CCceEEEeC---------CCCCeEEEEccCC
Q psy2442 18 RNQAVKAGGITSFYCIARG-----DPIPVIQWRKNGKRVSGT-------QSRYMVQEF---------PPGGSLLRIEPVR 76 (111)
Q Consensus 18 ~~~~~~~g~~~~l~c~~~~-----~~~~~~~w~~~~~~~~~~-------~~~~~~~~~---------~~~~~~l~~~~~~ 76 (111)
....+..|+.+.|.|.+.+ .|.+.+.|++++..+... ..++..... ......|.|.++.
T Consensus 184 ~~~~~~~G~~v~l~C~~~~~~~~~~P~p~i~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~ 263 (363)
T 1wio_A 184 SIVYKKEGEQVEFSFPLAFTVEKLTGSGELWWQAERASSSKSWITFDLKNKEVSVKRVTQDPKLQMGKKLPLHLTLPQAL 263 (363)
T ss_dssp EEEEEETBCCEEEECCCCCCCCSSCEEEEEEEEESSCCCCCCEEEEEECSSCEEEEEEECSSCCBCCSSSSCEEEESSBC
T ss_pred CceEEecCCEEEEEEEEecccccCCCceeEEEecCCCCccceEEEEEecCCeeeccccccchhhhcccCCceEEEEccCC
Confidence 3456778999999998877 667799999998876542 233333210 1123369999999
Q ss_pred CCCCCeEEEEEeeeC--CCceEeeEEEEEEe
Q psy2442 77 HARDDAVYECVAENG--VGDAVSAEASLTVY 105 (111)
Q Consensus 77 ~~~d~g~y~c~~~~~--~~~~~~~~~~l~~~ 105 (111)
. .|+|.|.|.+.|. .|.. ...+.|.|.
T Consensus 264 ~-~d~G~Y~C~a~n~~~~g~~-~~~~~l~V~ 292 (363)
T 1wio_A 264 P-QYAGSGNLTLALEAKTGKL-HQEVNLVVM 292 (363)
T ss_dssp G-GGCEEEEEEECBTTTTCCE-EEEEEEEEE
T ss_pred c-CcCcEEEEEEEEhhhcCeE-EEEEeEEEE
Confidence 8 9999999999999 8864 666666554
No 282
>1q0x_L FAB 9B1, light chain; anti-morphine antibody, FAB fragment, immune system; HET: PG4; 1.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q0y_L* 1ngp_L* 1ngq_L 3ks0_L* 1gig_L 2vir_A 2vis_A* 2vit_A 1sm3_L 4a6y_L 1ind_L* 1ine_L* 1yuh_L* 2zpk_L 3rhw_K* 3ri5_K* 3ria_K* 3rif_K* 1mfe_L* 1mfb_L* ...
Probab=99.13 E-value=1.3e-09 Score=60.03 Aligned_cols=75 Identities=15% Similarity=0.268 Sum_probs=53.7
Q ss_pred CcceeeecCCcEEEEEEEeccC---CCeEEEEECC--eec-----------cCCCCceEEEeCCCCCeEEEEccCCCCCC
Q psy2442 17 PRNQAVKAGGITSFYCIARGDP---IPVIQWRKNG--KRV-----------SGTQSRYMVQEFPPGGSLLRIEPVRHARD 80 (111)
Q Consensus 17 ~~~~~~~~g~~~~l~c~~~~~~---~~~~~w~~~~--~~~-----------~~~~~~~~~~~~~~~~~~l~~~~~~~~~d 80 (111)
+..+.+..|+.+.|.|.+.+.+ .+.+.|++.+ ..+ .....++...... ....|.|.++.. .|
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~-~~~~L~I~~v~~-~D 84 (212)
T 1q0x_L 7 ESALTTSPGETVTLTCRSSTGAVTTSNYANWVQEKPDHLFTGLIGGTNNRAPGVPARFSGSLIG-DKAALTITGAQT-ED 84 (212)
T ss_dssp CSEEEECTTCCEEEEEEESSSCCCGGGCCEEEEEETTTEEEEEEETTTEECTTCCTTEEEEEET-TEEEEEESSCCG-GG
T ss_pred CCeEeecCCCCEEEEEEecccccCCCCeEEEEEeCCCCCceEEEEcCcccCCcccccEEEEeeC-CEEEEEECCCCc-cC
Confidence 6667889999999999998876 3689999852 221 0112455443211 334599999998 99
Q ss_pred CeEEEEEeeeCCC
Q psy2442 81 DAVYECVAENGVG 93 (111)
Q Consensus 81 ~g~y~c~~~~~~~ 93 (111)
+|.|.|.+.|..+
T Consensus 85 ~G~Y~C~~~~~~~ 97 (212)
T 1q0x_L 85 EAIYFCALWSNNK 97 (212)
T ss_dssp CEEEEEEEECSSC
T ss_pred CEEEEEEEecCch
Confidence 9999999998765
No 283
>3tf7_C 42F3 MUT7 SCFV (42F3 alpha chain, linker, 42F3 BE; IG and MHC, antigen recognition, TCR-PMHC, membrane receptor system; 2.75A {Mus musculus}
Probab=99.12 E-value=2.3e-09 Score=60.88 Aligned_cols=82 Identities=16% Similarity=0.362 Sum_probs=56.6
Q ss_pred CCeeEEcCcceeeecCCcEEEEEEEeccCCCeEEEEECCe--ecc--------------CCCCceEEEeCCCCCeEEEEc
Q psy2442 10 PPEITLRPRNQAVKAGGITSFYCIARGDPIPVIQWRKNGK--RVS--------------GTQSRYMVQEFPPGGSLLRIE 73 (111)
Q Consensus 10 ~p~~~~~~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~~~--~~~--------------~~~~~~~~~~~~~~~~~l~~~ 73 (111)
++.+...+..+.+..|++++|.|.+.+. .+.+.|++... .+. ....++...........|.|.
T Consensus 137 ~~~v~~~p~~~~v~~G~~v~L~C~~~~~-~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~ 215 (256)
T 3tf7_C 137 EAAVTQSPRNKVTVTGENVTLSCRQTNS-HNYMYWYRQDTGHELRLIYYSYGAGNLQIGDVPDGYKATRTTQEDFFLTLE 215 (256)
T ss_dssp -CCEEESCSEEEEETTCCEEECEEECSC-CSEEEEEEECTTSCEEEEEEEESTTCCEECSCCTTCEEECCSSSBCEEEES
T ss_pred ccEEEecCCEEEEeCCCcEEEEEEcCCC-ceEEEEEEECCCCCeEEEEEEcCCCceecCccCCceEEEeCCCCeEEEEEC
Confidence 5566677777788899999999999876 66899998321 110 001233333212233459999
Q ss_pred cCCCCCCCeEEEEEeeeCCC
Q psy2442 74 PVRHARDDAVYECVAENGVG 93 (111)
Q Consensus 74 ~~~~~~d~g~y~c~~~~~~~ 93 (111)
++.. .|+|.|.|.+.|..|
T Consensus 216 ~v~~-~DsG~Y~C~a~n~~g 234 (256)
T 3tf7_C 216 SASP-SQTSLYFCASSDAPG 234 (256)
T ss_dssp SCCG-GGCEEEEEEEEEETT
T ss_pred CCCH-HHCEEEEEEecCCCC
Confidence 9998 999999999988755
No 284
>3pv7_A B7-H6, IG-like domain-containing protein DKFZP686O24166/DKFZP686I21167; NK cell receptor, receptor-ligand complex, immune system; HET: NAG; 2.00A {Homo sapiens} PDB: 3pv6_A*
Probab=99.12 E-value=1.2e-09 Score=61.63 Aligned_cols=100 Identities=17% Similarity=0.296 Sum_probs=55.5
Q ss_pred eeEEecCCCeeEEcCcceeeecCCcEEEEEEEec-cCCC-eEEEEECCeeccCC----CC--ceEEEeCCCC----CeEE
Q psy2442 3 RKVRFLDPPEITLRPRNQAVKAGGITSFYCIARG-DPIP-VIQWRKNGKRVSGT----QS--RYMVQEFPPG----GSLL 70 (111)
Q Consensus 3 ~~l~v~~~p~~~~~~~~~~~~~g~~~~l~c~~~~-~~~~-~~~w~~~~~~~~~~----~~--~~~~~~~~~~----~~~l 70 (111)
..|.|..+|.+...+.. ....|+.+.|.|.+.+ .|.+ .+.|++++..+... .. .......... ...|
T Consensus 112 ~~L~V~~~P~v~~~~~~-~~~~~~~~~L~C~~~g~~P~pi~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~s~L 190 (248)
T 3pv7_A 112 VQLEVVASPASRLLLDQ-VGMKENEDKYMCESSGFYPEAINITWEKQTQKFPHPIEISEDVITGPTIKNMDGTFNVTSCL 190 (248)
T ss_dssp EEEEEEBCCEEEEECC---------CEEEEEEEEEBSSCCEEEEEEECSSSCSCEEECTTEEEEEEEECTTSCEEEEEEE
T ss_pred EEEEEecCCceEEecCC-ccccCCCcEEEEEEccEECCCeEEEEEECCccCCCccccccceeecccEECCCCCEEEEEEE
Confidence 45777778887655543 3456777889999988 7888 89999988643211 00 0011111101 1236
Q ss_pred EEccCCCCCCCeEEEEEeeeCCCc-eEeeEEEEEE
Q psy2442 71 RIEPVRHARDDAVYECVAENGVGD-AVSAEASLTV 104 (111)
Q Consensus 71 ~~~~~~~~~d~g~y~c~~~~~~~~-~~~~~~~l~~ 104 (111)
.+..... .|.|.|.|.+.|..+. .....+.|.|
T Consensus 191 ~i~~~~~-~d~g~YtC~a~n~~~~~~~~~~v~l~V 224 (248)
T 3pv7_A 191 KLNSSQE-DPGTVYQCVVRHASLHTPLRSNFTLTA 224 (248)
T ss_dssp ECC--CC-CTTCEEEEEEECTTCSSCEEEEECC--
T ss_pred EEcCccc-cCCCEEEEEEECCCCCCCcEEEEEEEE
Confidence 6666666 7889999999998764 2344555555
No 285
>4ei6_B Vbeta16 XV19 type II natural killer T cell recept variable domain, human constant...; natural killer T cell receptor, immune system; 1.60A {Mus musculus} PDB: 4ei5_D 4elk_B 4elm_F* 2esv_E 3ffc_E 3utt_E 3utp_E* 3uts_E 3qjf_B 3qjh_B 3qiw_D* 3qiu_D
Probab=99.12 E-value=4.7e-09 Score=59.03 Aligned_cols=78 Identities=23% Similarity=0.404 Sum_probs=54.8
Q ss_pred CeeEEcCcceeeecCCcEEEEEEEeccCCCeEEEEEC--------------CeeccCC--C-CceEEEeCCCCCeEEEEc
Q psy2442 11 PEITLRPRNQAVKAGGITSFYCIARGDPIPVIQWRKN--------------GKRVSGT--Q-SRYMVQEFPPGGSLLRIE 73 (111)
Q Consensus 11 p~~~~~~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~--------------~~~~~~~--~-~~~~~~~~~~~~~~l~~~ 73 (111)
+.+...+..+.+..|++++|.| ..+.+.+.+.|++. +...... . .++...........|.|.
T Consensus 3 ~~v~~~p~~v~v~~G~~v~L~C-~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~ 81 (245)
T 4ei6_B 3 PKVLQIPSHQIIDMGQMVTLNC-DPVSNHLYFYWYKQILGQQMEFLVNFYNGKVMEKSKLFKDQFSVERPDGSYFTLKIQ 81 (245)
T ss_dssp CCCEEECSEEEEETTCCEEEEE-ECCTTCCEEEEEEEETTTEEEEEEEEETTEEEEECTTCCTTEEEECCTTSCEEEEEC
T ss_pred cceEeCCceEEecCCCCEEEEE-EcCCCCCEEEEEEECCCCCcEEEEEECCCceeccCCCccCCEEEEeccCceEEEEEC
Confidence 3455667777899999999999 66677789999981 2111111 1 455554322234469999
Q ss_pred cCCCCCCCeEEEEEeee
Q psy2442 74 PVRHARDDAVYECVAEN 90 (111)
Q Consensus 74 ~~~~~~d~g~y~c~~~~ 90 (111)
++.. .|+|.|.|.+.+
T Consensus 82 ~v~~-~D~G~Y~C~~~~ 97 (245)
T 4ei6_B 82 PTAL-EDSAVYFCASSF 97 (245)
T ss_dssp SCCG-GGCEEEEEEEEC
T ss_pred CCCH-hHCEEEEEEEcc
Confidence 9998 999999999985
No 286
>1p6f_A NKP46, natural cytotoxicity triggering receptor 1; natural cytotoxicity receptor, NK cell receptor, immunoglobulin fold, immune system; 2.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.12 E-value=6.1e-10 Score=63.01 Aligned_cols=93 Identities=18% Similarity=0.094 Sum_probs=61.6
Q ss_pred cCCCeeEEcCcceeeecCCcEEEEEEEeccCCCeEEEEECCeeccCCCCceEEEeCCCCCeEEEEccCCCCCCCeEEEEE
Q psy2442 8 LDPPEITLRPRNQAVKAGGITSFYCIARGDPIPVIQWRKNGKRVSGTQSRYMVQEFPPGGSLLRIEPVRHARDDAVYECV 87 (111)
Q Consensus 8 ~~~p~~~~~~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~g~y~c~ 87 (111)
..+|.+...+.. .+..|++++|.|...+ +...+.|++++..+........ .......|.|.++.. .|+|.|.|.
T Consensus 5 ~~kP~i~~~P~~-~v~~G~~VtL~C~~~~-~~~~~~w~k~g~~~~~~~~~~~---~~~~~~~L~I~~v~~-~DsG~Y~C~ 78 (242)
T 1p6f_A 5 LPKPFIWAEPHF-MVPKEKQVTICCQGNY-GAVEYQLHFEGSLFAVDRPKPP---ERINKVKFYIPDMNS-RMAGQYSCI 78 (242)
T ss_dssp CCCCEEEEESCS-EEETTCCEEEEEECCT-TCCEEEEEETTEEEEEECCSSC---TTCCEEEEEECSCCG-GGCEEEEEE
T ss_pred CCCCEEEeeCCC-ccCCCCcEEEEEeeCC-CCcEEEEEECCCcccccccccc---CCcceeEEEecCCCc-ccCeEEEEE
Confidence 456777766665 7889999999999865 3458899999876531100000 001334589999998 999999999
Q ss_pred eeeCCCc-eEeeEEEEEEec
Q psy2442 88 AENGVGD-AVSAEASLTVYE 106 (111)
Q Consensus 88 ~~~~~~~-~~~~~~~l~~~~ 106 (111)
+.+..+. ..+..+.|.|.+
T Consensus 79 ~~~~~~~s~~S~~~~L~V~~ 98 (242)
T 1p6f_A 79 YRVGELWSEPSNLLDLVVTE 98 (242)
T ss_dssp EEETTEECCCCCCEEEEEEC
T ss_pred EecCCccccCCcceEEEeec
Confidence 9875431 123455555554
No 287
>1moe_A Anti-CEA MAB T84.66; anti carcinoembryonic antigen, diabody, dimer, SCFV, variable domain, immune system; 2.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=99.12 E-value=1.5e-09 Score=60.85 Aligned_cols=92 Identities=23% Similarity=0.317 Sum_probs=61.2
Q ss_pred eEEcCcceeeecCCcEEEEEEEeccC----CCeEEEEECC--eec-----------cCCCCceEEEeCCCCCeEEEEccC
Q psy2442 13 ITLRPRNQAVKAGGITSFYCIARGDP----IPVIQWRKNG--KRV-----------SGTQSRYMVQEFPPGGSLLRIEPV 75 (111)
Q Consensus 13 ~~~~~~~~~~~~g~~~~l~c~~~~~~----~~~~~w~~~~--~~~-----------~~~~~~~~~~~~~~~~~~l~~~~~ 75 (111)
+...+..+.+..|++++|.|.+.+.+ .+.+.|++.. ..+ .....++...... ....|.|.++
T Consensus 4 v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~-~~~~L~I~~v 82 (240)
T 1moe_A 4 LTQSPASLAVSLGQRATMSCRAGESVDIFGVGFLHWYQQKPGQPPKLLIYRASNLESGIPVRFSGTGSR-TDFTLIIDPV 82 (240)
T ss_dssp EEEECSEEEECTTSCEEEEEEESSCCEETTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEET-TEEEEEESSC
T ss_pred eEeeCCeEEecCCCCEEEEEeCCCccccCCCceEEEEEECCCCCceEEEEEecccCcCCCccEEEEecC-CeEEEEEcCC
Confidence 34556667889999999999998887 6689999852 111 0112455543311 3335999999
Q ss_pred CCCCCCeEEEEEeeeCCCceEeeEEEEEEec
Q psy2442 76 RHARDDAVYECVAENGVGDAVSAEASLTVYE 106 (111)
Q Consensus 76 ~~~~d~g~y~c~~~~~~~~~~~~~~~l~~~~ 106 (111)
.. .|+|.|.|.+.|..+........|.|..
T Consensus 83 ~~-~D~G~Y~C~~~n~~~~~~~~~~~l~V~~ 112 (240)
T 1moe_A 83 EA-DDVATYYCQQTNEDPYTFGGGTKLEIKG 112 (240)
T ss_dssp CG-GGCEEEEEEECSSSSCCBCCCEEEEECC
T ss_pred Ch-hhCEEEEEEEccCCceeecCCEEEEEec
Confidence 98 9999999999987543112334455544
No 288
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.12 E-value=3.1e-11 Score=71.29 Aligned_cols=91 Identities=21% Similarity=0.235 Sum_probs=67.0
Q ss_pred cCCCeeEEcCcceeeecCCcEEEEEEEeccCCCeEEEEECCeeccCCCCceEEEeCCCCCeEEEEccCCCCCCCe-EEEE
Q psy2442 8 LDPPEITLRPRNQAVKAGGITSFYCIARGDPIPVIQWRKNGKRVSGTQSRYMVQEFPPGGSLLRIEPVRHARDDA-VYEC 86 (111)
Q Consensus 8 ~~~p~~~~~~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~g-~y~c 86 (111)
..+|.+...+....+..|+.+.+.|.+.+.|.+.+.|++++..+....... .......|.+..+.. .|.| .|.|
T Consensus 156 c~~P~i~~~~~~~~v~~G~~v~L~C~~~g~p~p~i~W~~~~~~~~~~~~~~----~~~~~~~L~i~~v~~-~D~G~~Y~C 230 (347)
T 2ifg_A 156 CGVPTLKVQVPNASVDVGDDVLLRCQVEGRGLEQAGWILTELEQSATVMKS----GGLPSLGLTLANVTS-DLNRKNVTC 230 (347)
T ss_dssp CCCCEEEEECCSSCCBTTCCEEEEEEEECSSCCCCCEEESCCCSSEEECCC----CCSSEEEEEEESCCS-TTTTCCEEE
T ss_pred CCCCceeccCCceEEeCCCcEEEEEEEecCCCCEEEEEcCCceeecccccc----eecccceEEEeeCCh-HHCCCeEEE
Confidence 357888777777889999999999999999999999999886543211111 011345589999998 9999 9999
Q ss_pred EeeeCCCceEeeEEEEEE
Q psy2442 87 VAENGVGDAVSAEASLTV 104 (111)
Q Consensus 87 ~~~~~~~~~~~~~~~l~~ 104 (111)
.+.|..|.. ...+.+.|
T Consensus 231 ~a~n~~g~~-~~~~~l~V 247 (347)
T 2ifg_A 231 WAENDVGRA-EVSVQVNV 247 (347)
T ss_dssp CCEETTEEC-CEEECCCC
T ss_pred EEEcCCCCE-EEEEEEEE
Confidence 999987653 44444433
No 289
>4f80_A Butyrophilin subfamily 3 member A1; B7 superfamily, CD277, immune system; 1.94A {Homo sapiens} PDB: 4f9l_A* 4f9p_A 4f8t_A 4f8q_A
Probab=99.12 E-value=8.1e-09 Score=57.44 Aligned_cols=86 Identities=20% Similarity=0.196 Sum_probs=56.2
Q ss_pred cceeeecCCcEEEEEEEeccCCC---eEEEEECCeec-----------c-----CCCCceEEEeCC--CCCeEEEEccCC
Q psy2442 18 RNQAVKAGGITSFYCIARGDPIP---VIQWRKNGKRV-----------S-----GTQSRYMVQEFP--PGGSLLRIEPVR 76 (111)
Q Consensus 18 ~~~~~~~g~~~~l~c~~~~~~~~---~~~w~~~~~~~-----------~-----~~~~~~~~~~~~--~~~~~l~~~~~~ 76 (111)
..+.+..|++++|.|.+.+.+.+ .+.|++++... . ....+....... .....|.|.++.
T Consensus 12 ~pV~v~~G~~v~L~C~v~~~~~~~~~~V~W~k~~~~~~v~~~~~g~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~ 91 (226)
T 4f80_A 12 GPILAMVGEDADLPCHLFPTMSAETMELKWVSSSLRQVVNVYADGKEVEDRQSAPYRGRTSILRDGITAGKAALRIHNVT 91 (226)
T ss_dssp SCEEEETTSCEEEEEEEESCCCCTTSEEEEEETTTCCEEEEEETTEECGGGSCTTTTTTEEEECTTGGGTEEEEEESSCC
T ss_pred CCEEEEcCCcEEEEEEEECCCCCCceEEEEEECCCCceEEEEeCCeEcccccCccccceEEEecccccCCeEEEEEeeCc
Confidence 44678899999999998766544 68999865321 1 001222222111 123459999999
Q ss_pred CCCCCeEEEEEeeeCCCceEeeEEEEEEe
Q psy2442 77 HARDDAVYECVAENGVGDAVSAEASLTVY 105 (111)
Q Consensus 77 ~~~d~g~y~c~~~~~~~~~~~~~~~l~~~ 105 (111)
. .|+|.|.|.+.|..+.. ...+.+.+.
T Consensus 92 ~-~D~G~Y~C~a~n~~~~~-~~~v~~~~~ 118 (226)
T 4f80_A 92 A-SDSGKYLCYFQDGDFYE-KALVELKVA 118 (226)
T ss_dssp G-GGCEEEEEEEEETTEEE-EEEEEEEEE
T ss_pred h-HHCeeEEEEEECCCcEE-EEEEEEeec
Confidence 8 99999999999977653 555544443
No 290
>2gi7_A GPVI protein; IG-like domains, blood clotting, cell adhesion; 2.40A {Homo sapiens}
Probab=99.12 E-value=6.1e-10 Score=60.34 Aligned_cols=80 Identities=18% Similarity=0.222 Sum_probs=55.7
Q ss_pred eEEec---CCCeeEEcCcceeeecCCcEEEEEEEeccCCCeEEEEECCeeccCCCCceEEEeCCCCCeEEEEccCCCCCC
Q psy2442 4 KVRFL---DPPEITLRPRNQAVKAGGITSFYCIARGDPIPVIQWRKNGKRVSGTQSRYMVQEFPPGGSLLRIEPVRHARD 80 (111)
Q Consensus 4 ~l~v~---~~p~~~~~~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d 80 (111)
.|.|. .+|.+...+ ...+..|+.+.|.|.+.+.+ +.+.|++++..+... ..... ....|.|.++.. .|
T Consensus 85 ~l~V~~~~~~p~i~~~p-~~~v~~G~~v~l~C~~~~~~-~~~~w~k~g~~~~~~-~~~~~-----~~~~L~i~~v~~-~D 155 (184)
T 2gi7_A 85 ELVATGVFAKPSLSAQP-GPAVSSGGDVTLQCQTRYGF-DQFALYKEGDPAPYK-NPERW-----YRASFPIITVTA-AH 155 (184)
T ss_dssp EEEEESSSCCCEEEEEC-CCSSCCTTCEEEEEECSSCC-CEEEEEECCCCTTSC-CCCEE-----EEESSSEEEETT-CC
T ss_pred EEEecCcCCCCEEEeCC-CceecCCCcEEEEEEcCCCC-cEEEEEECCCcCcce-ecCCC-----ceEEEEEccCCc-cC
Confidence 45553 355565545 34677899999999976654 589999998876532 11111 223377888888 99
Q ss_pred CeEEEEEeeeCC
Q psy2442 81 DAVYECVAENGV 92 (111)
Q Consensus 81 ~g~y~c~~~~~~ 92 (111)
.|.|.|.+.|..
T Consensus 156 ~G~Y~C~a~n~~ 167 (184)
T 2gi7_A 156 SGTYRCYSFSSR 167 (184)
T ss_dssp SEEEEEEEECTT
T ss_pred CeEEEEEEEeCC
Confidence 999999999964
No 291
>1eeq_A Kappa-4 immunoglobulin (light chain); protein stability, hydrogen bonds, immune system; 1.50A {Homo sapiens} SCOP: b.1.1.1 PDB: 1eeu_A 1lve_A 2lve_A 3lve_A 5lve_A 4lve_A 1efq_A 1qac_A 1ek3_A 2imm_A 1mvu_A 2ap2_A 1ap2_A 3bd3_A* 3bd4_A* 3bd5_A* 2imn_A 3dus_A* 3duu_A* 3dv4_A* ...
Probab=99.11 E-value=1.3e-09 Score=54.90 Aligned_cols=77 Identities=21% Similarity=0.336 Sum_probs=53.5
Q ss_pred eEEcCcceeeecCCcEEEEEEEeccCC------CeEEEEECC--ee---c-c-------CCCCceEEEeCCCCCeEEEEc
Q psy2442 13 ITLRPRNQAVKAGGITSFYCIARGDPI------PVIQWRKNG--KR---V-S-------GTQSRYMVQEFPPGGSLLRIE 73 (111)
Q Consensus 13 ~~~~~~~~~~~~g~~~~l~c~~~~~~~------~~~~w~~~~--~~---~-~-------~~~~~~~~~~~~~~~~~l~~~ 73 (111)
+.+.+..+.+.+|++++|.|...+.+. +.+.|++.. .. + . ....|+...... ....|.|.
T Consensus 4 v~q~p~~v~v~~G~~v~L~C~~~~~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~-~~~~L~I~ 82 (114)
T 1eeq_A 4 LTQSPDSLAVSLGERATINCKSSQSVLDSSNSKNYLAWYQQKPGQPPKLLIYWASTRESGVPDRFSGSGSG-TDFTLTIS 82 (114)
T ss_dssp EEEECSEEEECTTSCEEEEEEESSCCEETTTTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEET-TEEEEEES
T ss_pred eEecCCeEEEcCCCeEEEEEEcCCCccccccCCccEEEEEECCCCCCEEEEEecCccCCCCCCCEEEeecC-CEEEEEEC
Confidence 345566678999999999999877652 579999853 11 1 0 112455543211 33459999
Q ss_pred cCCCCCCCeEEEEEeeeC
Q psy2442 74 PVRHARDDAVYECVAENG 91 (111)
Q Consensus 74 ~~~~~~d~g~y~c~~~~~ 91 (111)
+++. +|+|.|.|.+.+.
T Consensus 83 ~v~~-~DsG~Y~C~~~~~ 99 (114)
T 1eeq_A 83 SLQA-EDVAVYYCQQYYS 99 (114)
T ss_dssp SCCG-GGCEEEEEEECSS
T ss_pred CCCc-ccCEEEEEEEeeC
Confidence 9998 9999999998874
No 292
>3d9a_L Light chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_L 1xgp_A 1xgq_A 1xgr_A 1xgt_A 1dqq_A 1dqm_L 1dqj_A 1nby_A 1nbz_A 1ndg_A 1ndm_A 1xgu_A 1fh5_L 1bm3_L 1opg_L 1mlb_A 1mlc_A 1rih_L 1p2c_A ...
Probab=99.11 E-value=3.4e-10 Score=62.40 Aligned_cols=90 Identities=17% Similarity=0.321 Sum_probs=57.8
Q ss_pred eEEecC---CCeeEEcCcceeeecCCcEEEEEEEec-cCCC-eEEEEECCeeccCC-CCceEEEeCCCC----CeEEEEc
Q psy2442 4 KVRFLD---PPEITLRPRNQAVKAGGITSFYCIARG-DPIP-VIQWRKNGKRVSGT-QSRYMVQEFPPG----GSLLRIE 73 (111)
Q Consensus 4 ~l~v~~---~p~~~~~~~~~~~~~g~~~~l~c~~~~-~~~~-~~~w~~~~~~~~~~-~~~~~~~~~~~~----~~~l~~~ 73 (111)
.|.|.. +|.+...........|+.+.|.|.+.+ .|.+ .+.|+++|..+... ..........+. ...|.|.
T Consensus 103 ~l~V~~~~~~p~v~~~~~~~~~~~g~~~~l~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~ 182 (213)
T 3d9a_L 103 KLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLT 182 (213)
T ss_dssp EEEECCCCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCCEEEEEETTEEECTTEEEEECCCCTTTCCEEEEEEEEEE
T ss_pred EEEEecCCCCceeEeECCChhhcCCCcEEEEEEEeeecCCceEEEEEcCCCcCcceeeecCCCccCCCCCEEEEEEEEEe
Confidence 566654 566554333333447889999999987 5554 79999999887532 000000000001 1258888
Q ss_pred cCCCCCCCeEEEEEeeeCCCc
Q psy2442 74 PVRHARDDAVYECVAENGVGD 94 (111)
Q Consensus 74 ~~~~~~d~g~y~c~~~~~~~~ 94 (111)
.+.. .|.|.|.|.+.|....
T Consensus 183 ~~~~-~d~G~Y~C~a~n~~~~ 202 (213)
T 3d9a_L 183 KDEY-ERHNSYTCEATHKTST 202 (213)
T ss_dssp HHHH-HHCCEEEEEEECTTCS
T ss_pred cccc-CCCCEEEEEEEEccCC
Confidence 8887 8999999999997643
No 293
>2wng_A Tyrosine-protein phosphatase non-receptor type substrate 1; signal regulatory protein alpha, immunoglobulin superfamily, phosphoprotein; HET: NAG; 2.49A {Homo sapiens}
Probab=99.10 E-value=2.7e-10 Score=66.57 Aligned_cols=91 Identities=25% Similarity=0.341 Sum_probs=53.9
Q ss_pred ecCCCeeEEcCcceeeecCCcEEEEEEEeccCC-C-eEEEEECCeeccCCC-CceEEEeCCCCC----eEEEEccCCCCC
Q psy2442 7 FLDPPEITLRPRNQAVKAGGITSFYCIARGDPI-P-VIQWRKNGKRVSGTQ-SRYMVQEFPPGG----SLLRIEPVRHAR 79 (111)
Q Consensus 7 v~~~p~~~~~~~~~~~~~g~~~~l~c~~~~~~~-~-~~~w~~~~~~~~~~~-~~~~~~~~~~~~----~~l~~~~~~~~~ 79 (111)
+..+|.+...+.. +..|+.+.|.|.+.+.++ + .+.|+++|..+.... .... ...+ .. ..|.+..+.. .
T Consensus 219 v~~~P~i~~~~~~--~~~G~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~-~~~~-g~~~~~~~L~i~~~~~-~ 293 (327)
T 2wng_A 219 IRVPPTLEVTQQP--VRAENQVNVTCQVRKFYPQRLQLTWLENGNVSRTETASTVT-ENKD-GTYNWMSWLLVNVSAH-R 293 (327)
T ss_dssp BCBCCEEEEEEEC--CSSTTCCEEEEEEEEEBSSCEEEEEEETTEEEEEEECCSCE-ECTT-SCEEEEEEEEC-------
T ss_pred cCCCCEEEEecCC--cCCCCcEEEEEEEccccCCCcEEEEEECCeEccCcccCceE-ECCC-CcEEEEEEEEEccccc-c
Confidence 3456666544433 668999999999998544 4 799999998874210 1111 1111 11 3366777777 8
Q ss_pred CCeEEEEEeeeCCCceEeeEEEE
Q psy2442 80 DDAVYECVAENGVGDAVSAEASL 102 (111)
Q Consensus 80 d~g~y~c~~~~~~~~~~~~~~~l 102 (111)
|.|.|.|.+.|..+......+.+
T Consensus 294 d~G~Y~C~a~N~~~~~~s~~~~~ 316 (327)
T 2wng_A 294 DDVKLTCQVEHDGQPAVSKSHDL 316 (327)
T ss_dssp -CCEEEEEEEETTCCCEEEEEEC
T ss_pred CCCEEEEEEEeCCCCCchhheEE
Confidence 99999999999988654555443
No 294
>2if7_A SLAM family member 6; NTB-A, homophilic receptor, immune system; 3.00A {Homo sapiens}
Probab=99.10 E-value=3.9e-10 Score=61.61 Aligned_cols=86 Identities=12% Similarity=0.139 Sum_probs=60.2
Q ss_pred CcceeeecCCcEEEEEEEec-cCCCeEEEEECCeecc---C-C---------C----CceEEEeCCCCCeEEEEccCCCC
Q psy2442 17 PRNQAVKAGGITSFYCIARG-DPIPVIQWRKNGKRVS---G-T---------Q----SRYMVQEFPPGGSLLRIEPVRHA 78 (111)
Q Consensus 17 ~~~~~~~~g~~~~l~c~~~~-~~~~~~~w~~~~~~~~---~-~---------~----~~~~~~~~~~~~~~l~~~~~~~~ 78 (111)
+..+.+..|++++|.|...+ .+.+.+.|++++..+. . . . .|+.+. ....|.|.++..
T Consensus 5 p~~v~~~~G~~v~L~C~~~~~~~~~~v~W~~~~~~i~~~~~~~~~~~~~~~~~~~~~~R~~~~----~~~sL~I~~v~~- 79 (193)
T 2if7_A 5 PLMVNGILGESVTLPLEFPAGEKVNFITWLFNETSLAFIVPHETKSPEIHVTNPKQGKRLNFT----QSYSLQLSNLKM- 79 (193)
T ss_dssp CEEEEEETTSCEEECCCCCCCSCCCEEEEEETTEEEEEEECCSSSCCEEEECCHHHHTTEEEC----TTCCEEECSCCG-
T ss_pred CeEEEEEecCeEEEeccCCCcccccEEEEEECCEEEEEEecccCCCCceeecCccccccEEEC----CCeEEEECCCCc-
Confidence 44567889999999999865 4446899999875431 1 0 0 122222 234499999998
Q ss_pred CCCeEEEEEeeeCCCceEeeEEEEEEecCC
Q psy2442 79 RDDAVYECVAENGVGDAVSAEASLTVYEGE 108 (111)
Q Consensus 79 ~d~g~y~c~~~~~~~~~~~~~~~l~~~~~~ 108 (111)
.|+|.|.|.+.+..+.. ...+.|.|..++
T Consensus 80 ~D~G~Y~C~~~~~~~~~-~~~~~L~V~~~~ 108 (193)
T 2if7_A 80 EDTGSYRAQISTKTSAK-LSSYTLRILRQL 108 (193)
T ss_dssp GGCEEEEEEEECSSCEE-EEEEEEEEECCC
T ss_pred ccCceEEEEEEecCCCe-EEEEEEEEEccC
Confidence 99999999999887653 456677776544
No 295
>3tv3_L PGT128 light chain, IG lambda-2 chain C regions; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_L* 3twc_L* 3tnm_L 2mcg_1 1mcw_M 1a8j_L 3mcg_1 1dcl_A 1mcb_A* 1mcc_A* 1mcd_A* 1mce_A* 1mcf_A* 1mch_A 1mci_A* 1mcj_A* 1mck_A 1mcl_A* 1mcn_A* 1mcq_A ...
Probab=99.10 E-value=1.3e-09 Score=59.94 Aligned_cols=83 Identities=20% Similarity=0.330 Sum_probs=56.8
Q ss_pred ceeeecCCcEEEEEEEeccCCCeEEEEEC--Ceecc-----------CCCCceEEEeCCCCCeEEEEccCCCCCCCeEEE
Q psy2442 19 NQAVKAGGITSFYCIARGDPIPVIQWRKN--GKRVS-----------GTQSRYMVQEFPPGGSLLRIEPVRHARDDAVYE 85 (111)
Q Consensus 19 ~~~~~~g~~~~l~c~~~~~~~~~~~w~~~--~~~~~-----------~~~~~~~~~~~~~~~~~l~~~~~~~~~d~g~y~ 85 (111)
.+.+..|++++|.|.+. +.+.+.|++. +..+. ....++...... ....|.|.++.. .|+|.|.
T Consensus 9 ~~~v~~G~~v~L~C~~~--~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~-~~~~L~I~~v~~-~D~G~Y~ 84 (211)
T 3tv3_L 9 SASGSPGQSITISCTGT--SNNFVSWYQQHAGKAPKLVIYDVNKRPSGVPDRFSGSKSG-NTASLTVSGLQT-DDEAVYY 84 (211)
T ss_dssp EEEECTTCEEEEEEECC--CSSCEEEEEECTTSCCEEEEBTTTBCCTTSCTTEEEEEET-TEEEEEEESCCG-GGCEEEE
T ss_pred eEEEcCCCCEEEEEEEC--CCCeEEEEEECCCCCCEEEEEEecccCCCCcCcEEEEccC-CEEEEEECCCCh-hHCEEEE
Confidence 56888999999999988 7779999983 22110 012355443311 344599999998 9999999
Q ss_pred EEeeeCCC-ceEeeEEEEEEe
Q psy2442 86 CVAENGVG-DAVSAEASLTVY 105 (111)
Q Consensus 86 c~~~~~~~-~~~~~~~~l~~~ 105 (111)
|.+.|..+ ........+.|.
T Consensus 85 C~~~~~~~~~~~~~~~~l~V~ 105 (211)
T 3tv3_L 85 CGSLVGNWDVIFGGGTKLTVL 105 (211)
T ss_dssp EEEEETTTEEEECCCEEEEEC
T ss_pred EEEecCCCceeECCCceEEEe
Confidence 99999776 222344555555
No 296
>4gos_A V-SET domain-containing T-cell activation inhibit; immunoglobulin domain, glycoprotein, disulfide bond, immunit adaptive immunity; HET: NAG BMA MAN; 1.59A {Homo sapiens}
Probab=99.10 E-value=1.5e-09 Score=55.56 Aligned_cols=88 Identities=24% Similarity=0.283 Sum_probs=56.8
Q ss_pred EcCcceeeecCCcEEEEEEEeccCC---CeEEEEECCeec-----------cC-----CCCceEEEeCC--CCCeEEEEc
Q psy2442 15 LRPRNQAVKAGGITSFYCIARGDPI---PVIQWRKNGKRV-----------SG-----TQSRYMVQEFP--PGGSLLRIE 73 (111)
Q Consensus 15 ~~~~~~~~~~g~~~~l~c~~~~~~~---~~~~w~~~~~~~-----------~~-----~~~~~~~~~~~--~~~~~l~~~ 73 (111)
.++..+....|++++|.|....... ..+.|++.+... .. ...|..+.... .....|.|.
T Consensus 10 ~~~~~v~g~vG~~v~L~C~~~~~~~~~~~~V~W~k~~~~~~v~~~~~g~~~~~~~~~~~~~R~~~~~~~~~~g~~sL~I~ 89 (125)
T 4gos_A 10 VTTVASAGNIGEDGILSCTFEPDIKLSDIVIQWLKEGVLGLVHEFKEGKDELSEQDEMFRGRTAVFADQVIVGNASLRLK 89 (125)
T ss_dssp EEEECEEEETTSCEEEEEEECCCSCGGGCEEEEEETTCSSBSEEEETTEECCTTBCGGGTTCEEECTTTGGGTBCCEEES
T ss_pred ccCceEEEeCCCCEEEEEEEcCCcccCcEEEEEEEeccCceEEEEEeecccccccCccccceEEEecCCccCCeEEEEEC
Confidence 3444567778999999999764333 268999864311 00 01233332111 012349999
Q ss_pred cCCCCCCCeEEEEEeeeCCCceEeeEEEEEE
Q psy2442 74 PVRHARDDAVYECVAENGVGDAVSAEASLTV 104 (111)
Q Consensus 74 ~~~~~~d~g~y~c~~~~~~~~~~~~~~~l~~ 104 (111)
+++. +|+|.|.|.+.+..+.. ...+.|.|
T Consensus 90 ~v~~-~D~G~Y~C~v~~~~g~~-~~~v~LkV 118 (125)
T 4gos_A 90 NVQL-TDAGTYKCYIITSKGKG-NANLEYKT 118 (125)
T ss_dssp SCCG-GGCEEEEEEEEETTEEE-EEEEEEEE
T ss_pred CCCh-HHCEEEEEEEEeCCCeE-EEEEEEEE
Confidence 9998 99999999999987764 66666655
No 297
>2edo_A CD48 antigen; beta-sandwich, IG-fold, B-lymphocyte activation marker blast-1, BCM1 surface antigen, leukocyte antigen MEM-102, TCT.1; NMR {Homo sapiens}
Probab=99.10 E-value=2.9e-10 Score=57.93 Aligned_cols=89 Identities=16% Similarity=0.212 Sum_probs=59.9
Q ss_pred ceeeecCCcEEEEEEE-eccCCCeEEEEECCe-ecc------------CCCCceEEEeCCCCCeEEEEccCCCCCCCeEE
Q psy2442 19 NQAVKAGGITSFYCIA-RGDPIPVIQWRKNGK-RVS------------GTQSRYMVQEFPPGGSLLRIEPVRHARDDAVY 84 (111)
Q Consensus 19 ~~~~~~g~~~~l~c~~-~~~~~~~~~w~~~~~-~~~------------~~~~~~~~~~~~~~~~~l~~~~~~~~~d~g~y 84 (111)
.+.+..|++++|.|.. .......+.|++... .+. .-..|+.+.. ....|.|.+++. .|+|.|
T Consensus 13 pv~~~~G~~VtL~c~~~~~~~~~~i~W~~~~~~~i~~~~~~~~~~~~~~f~~R~~l~~---~~~sL~I~nv~~-~DsG~Y 88 (121)
T 2edo_A 13 HMTVVSGSNVTLNISESLPENYKQLTWFYTFDQKIVEWDSRKSKYFESKFKGRVRLDP---QSGALYISKVQK-EDNSTY 88 (121)
T ss_dssp CCEEETTSCEEECCSSCCCSSEEEEEEEEETTEEEEEECSSCEEECSCTTTTTCEECT---TTCCEEESSCCG-GGCSEE
T ss_pred EEEEEeCCCEEEeCCCCCCCceeEEEEEcCCCCeEEEEECcCCeEeChhcCCcEEEeC---CCceEEEeCCCH-HHCeEE
Confidence 3678899999999976 333344789998653 111 0112333321 223499999998 999999
Q ss_pred EEEeeeCCCceEeeEEEEEEecCCCCC
Q psy2442 85 ECVAENGVGDAVSAEASLTVYEGEEKP 111 (111)
Q Consensus 85 ~c~~~~~~~~~~~~~~~l~~~~~~~~p 111 (111)
.|.+.+..+......+.|.|..++..|
T Consensus 89 ~c~v~~~~~~~~~~~~~L~V~~~~~~P 115 (121)
T 2edo_A 89 IMRVLKKTGNEQEWKIKLQVLDPVPKP 115 (121)
T ss_dssp EEEEEETTTEEEECCEECEEECCSCCC
T ss_pred EEEEEcCCCcEEEEEEEEEEECCCCCC
Confidence 999987654334667788888777665
No 298
>1h5b_A Murine T cell receptor (TCR) valpha domain; immune response, immunoglobulin fold; 1.85A {Mus musculus} SCOP: b.1.1.1 PDB: 1h5b_C 1h5b_B
Probab=99.10 E-value=9.9e-10 Score=55.19 Aligned_cols=79 Identities=19% Similarity=0.276 Sum_probs=53.9
Q ss_pred eEEcCcceeeecCCcEEEEEEEeccCCCeEEEEECC--eecc---------CCCCceEEEeC--CCCCeEEEEccCCCCC
Q psy2442 13 ITLRPRNQAVKAGGITSFYCIARGDPIPVIQWRKNG--KRVS---------GTQSRYMVQEF--PPGGSLLRIEPVRHAR 79 (111)
Q Consensus 13 ~~~~~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~~--~~~~---------~~~~~~~~~~~--~~~~~~l~~~~~~~~~ 79 (111)
+.+.+..+.+..|++++|.|...+.+ +.+.|++.. ..+. ....++..... ......|.|.+++. +
T Consensus 4 v~q~p~~~~v~~G~~v~L~C~~~~~~-~~v~W~r~~~~~~~~~l~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~-~ 81 (113)
T 1h5b_A 4 VEQSPSALSLHEGTDSALRCNFTTTM-RSVQWFRQNSRGSLISLFYLASGTKENGRLKSAFDSERARYSTLHIRDAQL-E 81 (113)
T ss_dssp EEEECSEEEEETTCCEEEEEEESSCC-SEEEEEEECTTSCEEEEEEESSSEEEETTEEEECCSSSSSEEEEEECSCCG-G
T ss_pred eEECCCEEEEecCCcEEEEEEECCCC-ceEEEEEECCCCCeEEEEEECCCCccCCceEEEEccCCCCEEEEEECCCCh-h
Confidence 34556667889999999999987754 589999753 1110 01234444321 11233599999998 9
Q ss_pred CCeEEEEEeeeCCC
Q psy2442 80 DDAVYECVAENGVG 93 (111)
Q Consensus 80 d~g~y~c~~~~~~~ 93 (111)
|+|.|.|.+.|..+
T Consensus 82 DsG~Y~C~~~n~~~ 95 (113)
T 1h5b_A 82 DSGTYFCAAEASSG 95 (113)
T ss_dssp GCEEEEEEEECSSS
T ss_pred hCEEEEEEEecCCC
Confidence 99999999998653
No 299
>3sbw_C Programmed cell death 1 ligand 1; PD-1, PD-L1, B7-H1, programmed death-1 ligand 1, complex, costimulatory, immune system; 2.28A {Homo sapiens} PDB: 3fn3_A 3bis_A 3bik_A
Probab=99.10 E-value=2.5e-09 Score=59.17 Aligned_cols=91 Identities=19% Similarity=0.264 Sum_probs=59.7
Q ss_pred CcceeeecCCcEEEEEEEeccC-----CCeEEEEECCeecc---------C-----CCCceEEEeC--CCCCeEEEEccC
Q psy2442 17 PRNQAVKAGGITSFYCIARGDP-----IPVIQWRKNGKRVS---------G-----TQSRYMVQEF--PPGGSLLRIEPV 75 (111)
Q Consensus 17 ~~~~~~~~g~~~~l~c~~~~~~-----~~~~~w~~~~~~~~---------~-----~~~~~~~~~~--~~~~~~l~~~~~ 75 (111)
+..+.+..|+.+.|.|...+.+ ...+.|++.+..+. . ...+..+... ......|.|.++
T Consensus 8 ~~~v~~~~G~~v~L~C~~~~~p~~~~~~~~v~W~~~~~~v~~~~~g~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v 87 (222)
T 3sbw_C 8 KDLYVVEYGSNMTIECKFPVEKQLDLAALIVYWEMEDKNIIQFVHGEEDLKVQHSSYRQRARLLKDQLSLGNAALQITDV 87 (222)
T ss_dssp CSEEEEETTSCEEEEEECCCCSSCCTTTCEEEEEETTEEEEEEETTEECSSSSCGGGSSSEEECHHHHTTTEEEEEESSC
T ss_pred CccEEEEcCCcEEEEeEecCCCCCCCccEEEEEEECCcEEEEEeCCccccccccccccCceEEccccccCCEEEEEEcCc
Confidence 3446788999999999987655 33799999753221 0 0123332210 012235999999
Q ss_pred CCCCCCeEEEEEeeeCCCceEeeEEEEEEecCCCC
Q psy2442 76 RHARDDAVYECVAENGVGDAVSAEASLTVYEGEEK 110 (111)
Q Consensus 76 ~~~~d~g~y~c~~~~~~~~~~~~~~~l~~~~~~~~ 110 (111)
.. .|+|.|.|.+.+ .+. ....+.|.|..++..
T Consensus 88 ~~-~D~G~Y~C~~~~-~~~-~~~~~~l~V~~~~~~ 119 (222)
T 3sbw_C 88 KL-QDAGVYRCMISY-GGA-DYKRITVKVNAPYNK 119 (222)
T ss_dssp CG-GGCEEEEEEEES-SSE-EEEEEEEEEEBCCCC
T ss_pred cc-ccCeEEEEEEEe-CCC-ceeEEEEEEECCCCC
Confidence 98 999999999998 443 356677777766543
No 300
>2rcj_C Light chain; immunoglobulin M, polymeric antibodies, immunology, X-RAY solution scattering, constrained modelling, immune system; NMR {Homo sapiens}
Probab=99.10 E-value=2.5e-09 Score=66.13 Aligned_cols=90 Identities=17% Similarity=0.297 Sum_probs=61.1
Q ss_pred eeEEe----cCCCeeEEcCcceeeecCCcEEEEEEEeccCCC--eEEEEECCeeccCCCCceE-E-EeCCCC---CeEEE
Q psy2442 3 RKVRF----LDPPEITLRPRNQAVKAGGITSFYCIARGDPIP--VIQWRKNGKRVSGTQSRYM-V-QEFPPG---GSLLR 71 (111)
Q Consensus 3 ~~l~v----~~~p~~~~~~~~~~~~~g~~~~l~c~~~~~~~~--~~~w~~~~~~~~~~~~~~~-~-~~~~~~---~~~l~ 71 (111)
++|.| ..+|.+...+....+..|+.+.|.|.+.+.+++ .+.|+++|..+... .++. . ...++. ...|.
T Consensus 103 ~~l~V~~~~~~~P~~~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~-~~~~~~~~~~~~~~~~~s~L~ 181 (523)
T 2rcj_C 103 TKVTVLGQPKANPTVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADGSPVKAG-VETTKPSKQSNNKYAASSYLS 181 (523)
T ss_pred eEEEeccCCCcCCeEEecCCcccccCCCceEEEEEeccccCCceEEEEecCCCCCCCc-eEeccccccCCCCEEEEEEEE
Confidence 35666 345666555555566679999999999987764 89999998877532 1111 0 000100 13488
Q ss_pred EccCCCCCCCeEEEEEeeeCCCc
Q psy2442 72 IEPVRHARDDAVYECVAENGVGD 94 (111)
Q Consensus 72 ~~~~~~~~d~g~y~c~~~~~~~~ 94 (111)
|..+.. .|.|.|.|.+.|..+.
T Consensus 182 i~~~~~-~d~G~Y~C~a~n~~~~ 203 (523)
T 2rcj_C 182 LTPEQW-KSHRSYSCQVTHEGST 203 (523)
T ss_pred Eechhc-CCCceEEEEEEecCcc
Confidence 889988 9999999999997764
No 301
>3ry4_A Low affinity immunoglobulin gamma FC region recep; FC receptor, CD32, immunoglobulin superfamily, low responder polymorphism, cell membrane; HET: NAG; 1.50A {Homo sapiens} PDB: 1fcg_A 3ry5_A 1h9v_A 3d5o_F* 3ry6_C* 2fcb_A
Probab=99.10 E-value=1.5e-09 Score=57.78 Aligned_cols=80 Identities=20% Similarity=0.249 Sum_probs=57.1
Q ss_pred CeeEEcCcceeeecCCcEEEEEEEeccC-CCeEEEEECCeeccCCCCceEEEeCCCCCeEEEEccCCCCCCCeEEEEEee
Q psy2442 11 PEITLRPRNQAVKAGGITSFYCIARGDP-IPVIQWRKNGKRVSGTQSRYMVQEFPPGGSLLRIEPVRHARDDAVYECVAE 89 (111)
Q Consensus 11 p~~~~~~~~~~~~~g~~~~l~c~~~~~~-~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~g~y~c~~~ 89 (111)
|.+...+....+..|+.+.|.|...+.+ .+.+.|++++..+.... ..+.+.++.. .|.|.|.|.+.
T Consensus 5 p~i~~~p~~~~v~~G~~v~l~C~~~~~p~~~~~~W~~~g~~~~~~~------------~~~~~~~~~~-~d~G~Y~C~~~ 71 (170)
T 3ry4_A 5 AVLKLEPPWINVLQEDSVTLTCQGARSPESDSIQWFHNGNLIPTHT------------QPSYRFKANN-NDSGEYTCQTG 71 (170)
T ss_dssp CEEEEESCCSEEETTCEEEEEEESCCCSSSSCEEEEETTEECTTCC------------SSEEEEECCG-GGCEEEEEEET
T ss_pred CEEEeCCCCeEEECCCcEEEEEEecCCCCcceEEEEECCeEcccCc------------cceEEEeccc-ccCeEEEEEEe
Confidence 4455566666788999999999998876 56899999998875431 1144567777 99999999998
Q ss_pred eCCCceEeeEEEEEEec
Q psy2442 90 NGVGDAVSAEASLTVYE 106 (111)
Q Consensus 90 ~~~~~~~~~~~~l~~~~ 106 (111)
+.... ..+.+.+..
T Consensus 72 ~~~~s---~~~~l~v~~ 85 (170)
T 3ry4_A 72 QTSLS---DPVHLTVLF 85 (170)
T ss_dssp TSBCC---CCEEEEEEC
T ss_pred CCCce---EeEEEEEEC
Confidence 75432 334444443
No 302
>2d9c_A Signal-regulatory protein beta-1; beta-sandwich, SIRP-beta-1, CD172B antigen, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.09 E-value=6.1e-09 Score=53.90 Aligned_cols=99 Identities=17% Similarity=0.254 Sum_probs=61.7
Q ss_pred eeEEcCcceeeecCCcEEEEEEEecc-CCCeEEEEECCee----ccCC-C---CceEEEe----CCCCCeEEEEccCCCC
Q psy2442 12 EITLRPRNQAVKAGGITSFYCIARGD-PIPVIQWRKNGKR----VSGT-Q---SRYMVQE----FPPGGSLLRIEPVRHA 78 (111)
Q Consensus 12 ~~~~~~~~~~~~~g~~~~l~c~~~~~-~~~~~~w~~~~~~----~~~~-~---~~~~~~~----~~~~~~~l~~~~~~~~ 78 (111)
.+.+.+..+.+..|++++|.|...+. +.+.+.|++.+.. +... . .++.... .......|.|.+++.
T Consensus 10 ~v~q~p~~~~v~~G~~v~L~C~~~~~~~~~~v~W~r~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~~~~L~I~~v~~- 88 (136)
T 2d9c_A 10 QVIQPEKSVSVAAGESATLRCAMTSLIPVGPIMWFRGAGAGRELIYNQKEGHFPRVTTVSELTKRNNLDFSISISNITP- 88 (136)
T ss_dssp CEECCCSEEEEETTSCEEECCEESCCCSCCCCEEEETTTSSCEEEEESSSCCCSSBCCSSCSSSSSCCBCCEEESSCCT-
T ss_pred EEEecCcEEEEcCCCCEEEEEEEcCCCCCceEEEEeecCCCeEEEEEcCCCcccceeeeeeeccCCCCEEEEEECCCCH-
Confidence 34445566789999999999998765 4568999997521 1100 0 1221110 000134599999998
Q ss_pred CCCeEEEEEeeeCCCc--e---EeeEEEEEEecCCCCC
Q psy2442 79 RDDAVYECVAENGVGD--A---VSAEASLTVYEGEEKP 111 (111)
Q Consensus 79 ~d~g~y~c~~~~~~~~--~---~~~~~~l~~~~~~~~p 111 (111)
+|+|.|.|.+.+..+. . ......|.|...|..|
T Consensus 89 ~DsG~Y~C~~~~~~~~~~~~~~~g~~t~L~V~~~~s~P 126 (136)
T 2d9c_A 89 ADAGTYYCVKFRKGSPDDVEFKSGAGTELSVRAKPSAP 126 (136)
T ss_dssp TTCEEEEEEEEECCSSSCEEEEECCCEEEEEECCCCCC
T ss_pred HHCEEEEEEEEeCCCCcccceeeCCCeEEEEEeCCCCC
Confidence 9999999998875321 1 0134577777666554
No 303
>4dep_C Interleukin-1 receptor accessory protein; B-trefoil, immunoglobulin, immune system, extracellular; HET: NAG; 3.10A {Homo sapiens} PDB: 3o4o_B*
Probab=99.09 E-value=2.2e-11 Score=71.66 Aligned_cols=95 Identities=19% Similarity=0.269 Sum_probs=38.2
Q ss_pred CCeeEEcCcce--eeecCCcEEEEEEEe----ccCCCeEEEEECCeeccCCCCceEE----EeCC-CC---CeEEEEccC
Q psy2442 10 PPEITLRPRNQ--AVKAGGITSFYCIAR----GDPIPVIQWRKNGKRVSGTQSRYMV----QEFP-PG---GSLLRIEPV 75 (111)
Q Consensus 10 ~p~~~~~~~~~--~~~~g~~~~l~c~~~----~~~~~~~~w~~~~~~~~~~~~~~~~----~~~~-~~---~~~l~~~~~ 75 (111)
+|.+....... .+..|+.+.|.|.+. +.|.+.+.|++++..+.....++.. .... .. ...|.|.++
T Consensus 224 ~p~i~~~~~~~~~~v~~G~~v~l~C~~~~~~~g~p~p~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v 303 (349)
T 4dep_C 224 PPVIHSPNDHVVYEKEPGEELLIPCTVYFSFLMDSRNEVWWTIDGKKPDDITIDVTINESISHSRTEDETRTQILSIKKV 303 (349)
T ss_dssp SCEEC----------------CCCEEEEECCCTTCCCEEEEESSCC--------CCCCEEEECCTTCCEEEEECC-----
T ss_pred CCeEecCCCceeEEEecCCcEEEEEEEEEccCCCCCCEEEEEECCEEccccCCccccccceeeecCCCcEEEEEEEEeec
Confidence 56554444322 677899999999998 5678899999998876541111111 0000 01 123888889
Q ss_pred CCCCCC-eEEEEEeeeCCCceEeeEEEEEEec
Q psy2442 76 RHARDD-AVYECVAENGVGDAVSAEASLTVYE 106 (111)
Q Consensus 76 ~~~~d~-g~y~c~~~~~~~~~~~~~~~l~~~~ 106 (111)
.. .|. |.|.|.+.|..|.. ...+.|.+..
T Consensus 304 ~~-~d~~G~Y~C~a~N~~G~~-~~~~~l~v~~ 333 (349)
T 4dep_C 304 TS-EDLKRSYVCHARSAKGEV-AKAAKVKQKV 333 (349)
T ss_dssp ---------CEEEEECSSCEE-EEECC-----
T ss_pred cH-HHcCCcEEEEEEcCCCcE-EEEEEEeeec
Confidence 88 999 99999999999874 6666666644
No 304
>2gjj_A A21 single-chain antibody fragment against ERBB2; IG family, SCFV, immune system; 2.10A {Mus musculus} PDB: 3h3b_C
Probab=99.09 E-value=1.6e-09 Score=61.87 Aligned_cols=95 Identities=20% Similarity=0.289 Sum_probs=62.7
Q ss_pred CeeEEcCcceeeecCCcEEEEEEEeccC------CCeEEEEEC--Ceecc-----------CCCCceEEEeCCCCCeEEE
Q psy2442 11 PEITLRPRNQAVKAGGITSFYCIARGDP------IPVIQWRKN--GKRVS-----------GTQSRYMVQEFPPGGSLLR 71 (111)
Q Consensus 11 p~~~~~~~~~~~~~g~~~~l~c~~~~~~------~~~~~w~~~--~~~~~-----------~~~~~~~~~~~~~~~~~l~ 71 (111)
+.+.+.+..+.+.+|++++|.|...+.+ .+.+.|++. +..+. ....++...... ....|.
T Consensus 6 ~~v~q~p~~v~v~~G~~v~L~C~~~~~~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~R~~~~~~~-~~~~L~ 84 (264)
T 2gjj_A 6 IVLTQTPSSLPVSVGEKVTMTCKSSQTLLYSNNQKNYLAWYQQKPGQSPKLLISWAFTRKSGVPDRFTGSGSG-TDFTLT 84 (264)
T ss_dssp CCEEEECSEEEEETTCCEEEEEEESSCCEETTTTEECEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEET-TEEEEE
T ss_pred cceEecCCeEEecCCCcEEEEeEcCCcccccccCCceEEEEEECCCCCcEEEEEecccCCCCCCccEEEecCC-CEEEEE
Confidence 4555667778899999999999998876 568999984 22110 012455544311 334599
Q ss_pred EccCCCCCCCeEEEEEeeeCCCceEeeEEEEEEecC
Q psy2442 72 IEPVRHARDDAVYECVAENGVGDAVSAEASLTVYEG 107 (111)
Q Consensus 72 ~~~~~~~~d~g~y~c~~~~~~~~~~~~~~~l~~~~~ 107 (111)
|.++.. .|+|.|.|.+.+..+........|.|..+
T Consensus 85 I~~v~~-~DsG~Y~C~~~~~~~~~~~~~~~L~V~~~ 119 (264)
T 2gjj_A 85 IGSVKA-EDLAVYYCQQYSNYPWTFGGGTRLEIKRG 119 (264)
T ss_dssp ESSCCG-GGCEEEEEEECSSSSCEECCCEEEEEECC
T ss_pred ECCCCH-HHCEEEEEEEecCCccEecCCEEEEEEcC
Confidence 999998 99999999998864321122334555543
No 305
>1j05_L T84.66 antibody, anti-CEA MAB T84.66, light chain; immunoglobulin, immune system; 1.50A {Mus musculus} SCOP: b.1.1.1 PDB: 1qfw_L* 1qnz_L 3iy3_A 3iy4_A
Probab=99.09 E-value=8.5e-10 Score=55.25 Aligned_cols=77 Identities=25% Similarity=0.384 Sum_probs=53.3
Q ss_pred eEEcCcceeeecCCcEEEEEEEeccC----CCeEEEEECC--ee---c-c-------CCCCceEEEeCCCCCeEEEEccC
Q psy2442 13 ITLRPRNQAVKAGGITSFYCIARGDP----IPVIQWRKNG--KR---V-S-------GTQSRYMVQEFPPGGSLLRIEPV 75 (111)
Q Consensus 13 ~~~~~~~~~~~~g~~~~l~c~~~~~~----~~~~~w~~~~--~~---~-~-------~~~~~~~~~~~~~~~~~l~~~~~ 75 (111)
+.+.+..+.+.+|++++|.|...+.+ .+.+.|++.. .. + . ....|+...... ....|.|.++
T Consensus 4 v~q~p~~~~~~~G~~v~L~C~~~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~R~~~~~~~-~~~~L~I~~v 82 (111)
T 1j05_L 4 LTQSPASLAVSLGQRATMSCRAGESVDIFGVGFLHWYQQKPGQPPKLLIYRASNLESGIPVRFSGTGSR-TDFTLIIDPV 82 (111)
T ss_dssp EEEECSEEECCTTSCEEEEEEESSCCEETTEECEEEEEECTTSCEEEEEETTTEECTTSCTTEEEEEET-TEEEEEESSC
T ss_pred EEEeCCEEEEeCCCCEEEEeecCCCcccCCCceEEEEEeCCCCCCEEEEEecCcCCCCCCCcEEEEccC-CEEEEEECCC
Confidence 34556667889999999999987765 3579999852 11 1 0 112455543211 3345999999
Q ss_pred CCCCCCeEEEEEeeeC
Q psy2442 76 RHARDDAVYECVAENG 91 (111)
Q Consensus 76 ~~~~d~g~y~c~~~~~ 91 (111)
+. +|+|.|.|.+.+.
T Consensus 83 ~~-~DsG~Y~C~~~~~ 97 (111)
T 1j05_L 83 EA-DDVATYYCQQTNE 97 (111)
T ss_dssp CG-GGCEEEEEEECSS
T ss_pred Cc-ccCEEEEEEEecC
Confidence 98 9999999998874
No 306
>2coq_A NEW antigen receptor variable domain; IG VNAR, natural TYPE2, immune system; 2.10A {Orectolobus maculatus}
Probab=99.09 E-value=2.1e-09 Score=53.61 Aligned_cols=77 Identities=19% Similarity=0.369 Sum_probs=53.6
Q ss_pred eEEcCcceeeecCCcEEEEEEEeccC--CCeEEEEECC--ee---ccCCCCceEEEeC-CCCCeEEEEccCCCCCCCeEE
Q psy2442 13 ITLRPRNQAVKAGGITSFYCIARGDP--IPVIQWRKNG--KR---VSGTQSRYMVQEF-PPGGSLLRIEPVRHARDDAVY 84 (111)
Q Consensus 13 ~~~~~~~~~~~~g~~~~l~c~~~~~~--~~~~~w~~~~--~~---~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~d~g~y 84 (111)
+.+.+..+.+.+|++++|.|...+.. .+.+.|++.. .. +.....++..... ......|.|.+++. +|+|.|
T Consensus 3 v~q~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~~~~-~DsG~Y 81 (108)
T 2coq_A 3 VDQTPRIATKETGESLTINCVLRDTACALDSTNWYRTKLGSTKEQTISIGGRYSETVDEGSNSASLTIRDLRV-EDSGTY 81 (108)
T ss_dssp EEEECSEEEECTTCCEEEEEEECCSSEEEEEEEEEEEETTCCCEEECCCBTTEEEEEETTTTEEEEEECSCCG-GGCEEE
T ss_pred eEeCCceEEEcCCCCEEEEeEeCCCcCCCCEEEEEEcCCCCCcEEEEEeCCceEEEEcCCCCEEEEEECCCCc-ccCEEE
Confidence 34556677889999999999987653 4579999852 21 1112245554321 11345599999998 999999
Q ss_pred EEEeee
Q psy2442 85 ECVAEN 90 (111)
Q Consensus 85 ~c~~~~ 90 (111)
.|.+.+
T Consensus 82 ~C~~~~ 87 (108)
T 2coq_A 82 KCKAYR 87 (108)
T ss_dssp EEEEEE
T ss_pred EEEEEe
Confidence 999887
No 307
>2zg1_A Sialic acid-binding IG-like lectin 5; siglec-5 inhibitory receptor, two-domain structure, V-SET, C2-SET, IG-like domain, 6'-sialyllactose complex; HET: SIA; 2.70A {Homo sapiens} PDB: 2zg3_A* 2zg2_A
Probab=99.09 E-value=1.8e-09 Score=59.46 Aligned_cols=63 Identities=17% Similarity=0.288 Sum_probs=46.6
Q ss_pred eecCCcEEEEEEEecc----CCCeEEEEECCeeccCCCCceEEEeCCCCCeEEEEccCCCCCCCeEEEEEeeeCCC
Q psy2442 22 VKAGGITSFYCIARGD----PIPVIQWRKNGKRVSGTQSRYMVQEFPPGGSLLRIEPVRHARDDAVYECVAENGVG 93 (111)
Q Consensus 22 ~~~g~~~~l~c~~~~~----~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~g~y~c~~~~~~~ 93 (111)
+..|+.++|.|.+.+. |.+.+.|++++..... ... .....|.+..+.. .|.|.|.|.+.|..+
T Consensus 135 ~~~G~~v~L~C~~~~~~~~~p~p~v~W~~~~~~~~~--~~~------~~~~~L~i~~~~~-~~~g~Y~C~a~n~~~ 201 (214)
T 2zg1_A 135 LESGRPTRLSCSLPGSCEAGPPLTFSWTGNALSPLD--PET------TRSSELTLTPRPE-DHGTNLTCQMKRQGA 201 (214)
T ss_dssp CCTTCCEEEEEECTTCCSCSSCCEEEEESSTTSSSC--SSC------CCSSEEEECCCTT-CCSCEEEEEEECC--
T ss_pred ccCCCeEEEEEEeccCCCCCCCceEEEeCCCCccCC--CCc------eeEEEEEEecccH-HcCcEEEEEEEeCCC
Confidence 5689999999998764 7789999998765321 111 1345588888887 888999999999754
No 308
>1svz_A Immunoglobulin;, single-chain FV fragment 1696; antibody-antigen complex, HIV inhibiting antibody; 1.89A {Mus musculus} PDB: 1jp5_A
Probab=99.09 E-value=1.4e-09 Score=61.35 Aligned_cols=79 Identities=19% Similarity=0.267 Sum_probs=55.6
Q ss_pred eEEcCcceeeecCCcEEEEEEEeccC-----CCeEEEEECC--eec----c-------CCCCceEEEeCCCCCeEEEEcc
Q psy2442 13 ITLRPRNQAVKAGGITSFYCIARGDP-----IPVIQWRKNG--KRV----S-------GTQSRYMVQEFPPGGSLLRIEP 74 (111)
Q Consensus 13 ~~~~~~~~~~~~g~~~~l~c~~~~~~-----~~~~~w~~~~--~~~----~-------~~~~~~~~~~~~~~~~~l~~~~ 74 (111)
+.+.+..+.+..|++++|.|...+.+ .+.+.|++.. ..+ . ....++...... ....|.|.+
T Consensus 4 v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~-~~~~L~I~~ 82 (247)
T 1svz_A 4 MTQTPLYLPVSLGDQASISCRSSQTIVHNNGNTYLEWYLQKPGQSPQLLIYKVSNRFSGVPDRFSGSGSG-TDFTLKISR 82 (247)
T ss_dssp EEEECSEEEECTTCCEEEEEEESSCCBCTTSCBCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEET-TEEEEEESS
T ss_pred EEecCCeEEecCCCCEEEEEeCCCcccccCCCceEEEEEECCCCCceEEEEEecccCCCCCCcEEeccCC-CEEEEEECC
Confidence 34556667889999999999998877 5789999842 111 0 012455443211 334599999
Q ss_pred CCCCCCCeEEEEEeeeCCC
Q psy2442 75 VRHARDDAVYECVAENGVG 93 (111)
Q Consensus 75 ~~~~~d~g~y~c~~~~~~~ 93 (111)
+.. .|+|.|.|.+.|..+
T Consensus 83 v~~-~D~G~Y~C~~~n~~~ 100 (247)
T 1svz_A 83 VEA-EDLGIYYCFQGSHFP 100 (247)
T ss_dssp CCG-GGCEEEEEEECSSSS
T ss_pred CCH-HHCEEEEEEEccCCc
Confidence 998 999999999988644
No 309
>3auv_A SC-DSFV derived from the G6-FAB; SC-DSFV (disulfide-stabilized SCFV), SCFV, monovalent antibo antibody engineering, immune system; 2.40A {Homo sapiens} PDB: 2kh2_B 3iy0_L
Probab=99.08 E-value=2.8e-09 Score=61.13 Aligned_cols=75 Identities=23% Similarity=0.376 Sum_probs=52.5
Q ss_pred cCcceeeecCCcEEEEEEEeccC--CCeEEEEECC--eec----------------cCCCCceEEEeCC-CCCeEEEEcc
Q psy2442 16 RPRNQAVKAGGITSFYCIARGDP--IPVIQWRKNG--KRV----------------SGTQSRYMVQEFP-PGGSLLRIEP 74 (111)
Q Consensus 16 ~~~~~~~~~g~~~~l~c~~~~~~--~~~~~w~~~~--~~~----------------~~~~~~~~~~~~~-~~~~~l~~~~ 74 (111)
.+....+..|++++|.|.+.+.+ .+.+.|++.+ ..+ .....++...... .....|.|.+
T Consensus 140 ~p~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~ 219 (276)
T 3auv_A 140 ESGGGLVQPGGSLRLSCAASGFTISDYWIHWVRQAPGKCLEWVAGITPAGGYTYYADSVKGRFTISADTSKNTAYLQMNS 219 (276)
T ss_dssp EECCEEECTTCCEEEEEEEESSCGGGSEEEEEEECTTCCEEEEEEECGGGCCEEECTTTTTTEEEEEEGGGTEEEEEECS
T ss_pred CCCceEecCCCeEEEEEEecCccCCCCEEEEEEcCCCCCcEEEEEEeccCCccccccccCCcEEEEecCCCcEEEEEECC
Confidence 34556788999999999998766 4789999853 111 0112455444211 1223599999
Q ss_pred CCCCCCCeEEEEEeeeC
Q psy2442 75 VRHARDDAVYECVAENG 91 (111)
Q Consensus 75 ~~~~~d~g~y~c~~~~~ 91 (111)
+.. .|+|.|.|.+.|.
T Consensus 220 v~~-~DsG~Y~C~a~n~ 235 (276)
T 3auv_A 220 LRA-EDTAVYYCARFVF 235 (276)
T ss_dssp CCG-GGCEEEEEEEECS
T ss_pred CCh-hHCEEEEEEEEcC
Confidence 998 9999999999997
No 310
>3omz_A Human vdelta1 gamma delta T cell receptor delta1A; immunoglobulin fold, immune surveillance of cell stress PROT A/B, MIC-A/B binding, epithelium; 3.04A {Homo sapiens}
Probab=99.08 E-value=8.6e-10 Score=62.65 Aligned_cols=82 Identities=13% Similarity=0.172 Sum_probs=46.3
Q ss_pred CeeEEcCcceeeecCCcEEEEEEEeccCCCeEEEEEC--Ceecc-----C-----------CCCceEEE-eCCCCCeEEE
Q psy2442 11 PEITLRPRNQAVKAGGITSFYCIARGDPIPVIQWRKN--GKRVS-----G-----------TQSRYMVQ-EFPPGGSLLR 71 (111)
Q Consensus 11 p~~~~~~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~--~~~~~-----~-----------~~~~~~~~-~~~~~~~~l~ 71 (111)
|.+.+.+..+.+..|++++|.|...+.+.+.+.|++. +.... . ...++... ........|.
T Consensus 3 ~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~ 82 (259)
T 3omz_A 3 SNLEGRTKSVIRQTGSSAEITCDLAEGSTGYIHWYLHQEGKAPQRLLYYDSYTSSVVLESGISPGKYDTYGSTRKNLRMI 82 (259)
T ss_dssp --------CEEEETTCCEEEECCC-----CEEEEEEECTTSCCEEEEEEETTTCCEEECTTCCBTTEEEECC--CCCEEE
T ss_pred cccccCCceeEecCCCcEEEEEEEccCCCcEEEEEEECCCCCcEEEEEEecCcCccccCCCCCcceeEeecCCCCeEEEE
Confidence 4455666778899999999999998888889999983 11110 0 00111111 1111334599
Q ss_pred EccCCCCCCCeEEEEEeeeCCC
Q psy2442 72 IEPVRHARDDAVYECVAENGVG 93 (111)
Q Consensus 72 ~~~~~~~~d~g~y~c~~~~~~~ 93 (111)
|.++.. .|+|.|.|.+.+..+
T Consensus 83 I~~v~~-~DsG~Y~C~~~~~~~ 103 (259)
T 3omz_A 83 LRNLIE-NDSGVYYCATWDQNY 103 (259)
T ss_dssp ESSCCG-GGCEEEEEEEECTTS
T ss_pred ECCCCc-ccCEEEEEEEeeCCc
Confidence 999998 999999999988654
No 311
>1dlf_L Anti-dansyl immunoglobulin IGG2A(S); FV fragment; 1.45A {Mus musculus} SCOP: b.1.1.1 PDB: 1wz1_L* 2dlf_L 1maj_A 1mak_A 1ktr_L 2cju_L* 2uud_K* 1dsf_L 3nn8_B 1n4x_L 1bfv_L* 1cfv_L* 2bfv_L* 1wt5_C
Probab=99.08 E-value=7.8e-09 Score=51.89 Aligned_cols=77 Identities=21% Similarity=0.302 Sum_probs=53.1
Q ss_pred eEEcCcceeeecCCcEEEEEEEeccC-----CCeEEEEECC--ee---c-c-------CCCCceEEEeCCCCCeEEEEcc
Q psy2442 13 ITLRPRNQAVKAGGITSFYCIARGDP-----IPVIQWRKNG--KR---V-S-------GTQSRYMVQEFPPGGSLLRIEP 74 (111)
Q Consensus 13 ~~~~~~~~~~~~g~~~~l~c~~~~~~-----~~~~~w~~~~--~~---~-~-------~~~~~~~~~~~~~~~~~l~~~~ 74 (111)
+.+.+..+.+.+|++++|.|...+.+ ...+.|++.. .. + . ....|+...... ....|.|.+
T Consensus 4 v~q~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~R~~~~~~~-~~~~L~I~~ 82 (113)
T 1dlf_L 4 MTQTPLSLPVSLGNQASISCRSSQSLVHSNGNTYLHWYLQKPGQSPKLLIYKVSNRFSGVPDRFSGSGSG-TDFTLKISR 82 (113)
T ss_dssp EEEECSEEEECTTCCEEEEEEESSCCBCTTSCBCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEET-TEEEEEECS
T ss_pred EEEeCCEEEEcCCCCEEEEEEccccccccCCCceEEEEEECCCCCCeEEEEecCccCCCCCCCEEEEccC-CEEEEEECC
Confidence 34556667899999999999987655 3579998743 11 1 0 112455443211 334599999
Q ss_pred CCCCCCCeEEEEEeeeC
Q psy2442 75 VRHARDDAVYECVAENG 91 (111)
Q Consensus 75 ~~~~~d~g~y~c~~~~~ 91 (111)
++. +|+|.|.|.+.+.
T Consensus 83 v~~-~DsG~Y~C~~~~~ 98 (113)
T 1dlf_L 83 VEA-EDLGVYFCSQSTH 98 (113)
T ss_dssp CCG-GGCEEEEEEECSS
T ss_pred CCh-HHCEEEEEEEecC
Confidence 998 9999999998764
No 312
>3fku_X Neutralizing antibody F10; influenza, hemagglutinin, SCFV, F membrane, envelope protein, fusion protein, membrane, trans virion; HET: NAG BMA; 3.20A {Homo sapiens}
Probab=99.08 E-value=1.1e-09 Score=63.13 Aligned_cols=80 Identities=18% Similarity=0.312 Sum_probs=54.1
Q ss_pred CCeeEEcCcceeeecCCcEEEEEEEec-cC-CCeEEEEEC--Ceecc-----------CCCCceEEEeCCCCCeEEEEcc
Q psy2442 10 PPEITLRPRNQAVKAGGITSFYCIARG-DP-IPVIQWRKN--GKRVS-----------GTQSRYMVQEFPPGGSLLRIEP 74 (111)
Q Consensus 10 ~p~~~~~~~~~~~~~g~~~~l~c~~~~-~~-~~~~~w~~~--~~~~~-----------~~~~~~~~~~~~~~~~~l~~~~ 74 (111)
++.+...+. +.+.+|++++|.|...+ .+ .+.+.|++. +..+. ....++...... ....|.|.+
T Consensus 140 ~~~v~~~p~-~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~-~~~~L~I~~ 217 (280)
T 3fku_X 140 QPGLTQPPS-VSKGLRQTATLTCTGNSNNVGNQGAAWLQQHQGHPPKLLSYRNNDRPSGISERFSASRSG-NTASLTITG 217 (280)
T ss_dssp CCSBBCCSE-EEECTTCCEEEEEECCCCCCCTTCCEEEEECSSSCCEESCCTTCCCCSSSCTTEEEEEET-TEEEEEECS
T ss_pred eeEEEeCCc-EEEecCCCEEEEEEecCCCCCCceEEEEEECCCCCCEEEEEeccccCCCCCCCEEEEccC-CEEEEEECC
Confidence 445555555 78889999999999887 33 368999873 22111 012344443321 334599999
Q ss_pred CCCCCCCeEEEEEeeeCC
Q psy2442 75 VRHARDDAVYECVAENGV 92 (111)
Q Consensus 75 ~~~~~d~g~y~c~~~~~~ 92 (111)
+.. .|+|.|.|.+.+..
T Consensus 218 v~~-~DsG~Y~C~~~~~~ 234 (280)
T 3fku_X 218 LQP-EDEADYYCSTWDSS 234 (280)
T ss_dssp CCG-GGCSEEEEEEEETT
T ss_pred CCH-HHCEEEEEEEecCC
Confidence 998 99999999998865
No 313
>1lk3_L 9D7 light chain; antigen-antibody complex, immune system; 1.91A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 1fn4_A 1c5d_L 1bfo_A 3b9k_L*
Probab=99.07 E-value=1.3e-09 Score=60.07 Aligned_cols=89 Identities=17% Similarity=0.318 Sum_probs=56.1
Q ss_pred eEEecC---CCeeEEcCcceeeecCCcEEEEEEEecc-CCC-eEEEEECCeeccCC-CCceEEEeCCCC----CeEEEEc
Q psy2442 4 KVRFLD---PPEITLRPRNQAVKAGGITSFYCIARGD-PIP-VIQWRKNGKRVSGT-QSRYMVQEFPPG----GSLLRIE 73 (111)
Q Consensus 4 ~l~v~~---~p~~~~~~~~~~~~~g~~~~l~c~~~~~-~~~-~~~w~~~~~~~~~~-~~~~~~~~~~~~----~~~l~~~ 73 (111)
+|.|.. +|.+...+.......|+.+.|.|.+.+. |.+ .+.|+++|..+... ............ ...|.|.
T Consensus 102 ~l~V~~~~~~P~v~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~ 181 (210)
T 1lk3_L 102 KLELKRADAAPTVSIFPPSTEQLATGGASVVCLMNNFYPRDISVKWKIDGTERRDGVLDSVTDQDSKDSTYSMSSTLSLT 181 (210)
T ss_dssp EEEECCCCBCCEEEEECCCHHHHTTTEEEEEEEEEEEBSSCCEEEEEETTEECCTTEEEEECCCCTTTCCEEEEEEEEEE
T ss_pred EEEEcCCCcCCeEEEECCchhhccCCcEEEEEEEEeEeCCceEEEEEeCCccCCCCceEccCCccCCCCCEEEEEEEEEC
Confidence 566654 4555543332234478999999999874 443 79999999887532 000000000001 1247888
Q ss_pred cCCCCCCCeEEEEEeeeCCC
Q psy2442 74 PVRHARDDAVYECVAENGVG 93 (111)
Q Consensus 74 ~~~~~~d~g~y~c~~~~~~~ 93 (111)
.+.. .|.|.|.|.+.|...
T Consensus 182 ~~~~-~d~G~Y~C~a~n~~~ 200 (210)
T 1lk3_L 182 KADY-ESHNLYTCEVVHKTS 200 (210)
T ss_dssp HHHH-HTCCEEEEEEECTTC
T ss_pred hHHh-ccCCcEEEEEEecCC
Confidence 8887 899999999999764
No 314
>3q5y_A TCR N15 beta; IG, T cell receptor, antigen peptide/MHC, membrane, immune S; HET: EPE; 1.90A {Mus musculus} PDB: 1nfd_B* 3q5t_A
Probab=99.07 E-value=1.4e-08 Score=57.03 Aligned_cols=76 Identities=22% Similarity=0.380 Sum_probs=53.5
Q ss_pred eeEEcCcceeeecCCcEEEEEEEeccCCCeEEEEECC--------------eecc--CCCCceEEEeCCCCCeEEEEccC
Q psy2442 12 EITLRPRNQAVKAGGITSFYCIARGDPIPVIQWRKNG--------------KRVS--GTQSRYMVQEFPPGGSLLRIEPV 75 (111)
Q Consensus 12 ~~~~~~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~~--------------~~~~--~~~~~~~~~~~~~~~~~l~~~~~ 75 (111)
.+...+..+.+..|+++.|.|...+ +.+.+.|++.. .... ....++...........|.|.++
T Consensus 4 ~v~~~p~~v~v~~G~~v~L~C~~~~-~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~~v 82 (240)
T 3q5y_A 4 GVVQSPRHIIKEKGGRSVLTCIPIS-GHSNVVWYQQTLGKELKFLIQHYEKVERDKGFLPSRFSVQQFDDYHSEMNMSAL 82 (240)
T ss_dssp CCEEECSEEEEETTCCEEEEEECCT-TCCEEEEEEECTTSCCEEEEEEETTEEEEECSCCTTEEEEECTTSCEEEEECSC
T ss_pred ccccCcceeeecCCCcEEEEEEeCC-CCceEEEEEECCCCCCEEEEEEcCCccccCcccCCeEEEEeCCCCEEEEEECcC
Confidence 3445666678999999999999876 66799999821 1110 11245555442223456999999
Q ss_pred CCCCCCeEEEEEee
Q psy2442 76 RHARDDAVYECVAE 89 (111)
Q Consensus 76 ~~~~d~g~y~c~~~ 89 (111)
+. .|+|.|.|.+.
T Consensus 83 ~~-~D~G~Y~C~~~ 95 (240)
T 3q5y_A 83 EL-EDSAMYFCASS 95 (240)
T ss_dssp CG-GGCEEEEEEEE
T ss_pred Ch-hHCEEEEEEEc
Confidence 98 99999999997
No 315
>3pv7_A B7-H6, IG-like domain-containing protein DKFZP686O24166/DKFZP686I21167; NK cell receptor, receptor-ligand complex, immune system; HET: NAG; 2.00A {Homo sapiens} PDB: 3pv6_A*
Probab=99.07 E-value=6.4e-10 Score=62.69 Aligned_cols=90 Identities=13% Similarity=0.134 Sum_probs=58.2
Q ss_pred CcceeeecCCcEEEEEEEeccCCCe-----EEEEECCeeccC----------------CCCceEEEeCCCCCeEEEEccC
Q psy2442 17 PRNQAVKAGGITSFYCIARGDPIPV-----IQWRKNGKRVSG----------------TQSRYMVQEFPPGGSLLRIEPV 75 (111)
Q Consensus 17 ~~~~~~~~g~~~~l~c~~~~~~~~~-----~~w~~~~~~~~~----------------~~~~~~~~~~~~~~~~l~~~~~ 75 (111)
+..+.+..|+.+.|.|...+.+.+. +.|++.+..... ...++...........|.|.++
T Consensus 10 p~~~~v~~G~~v~L~C~~~g~p~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sL~I~~v 89 (248)
T 3pv7_A 10 GGTQITPLNDNVTIFCNIFYSQPLNITSMGITWFWKSLTFDKEVKVFEFFGDHQEAFRPGAIVSPWRLKSGDASLRLPGI 89 (248)
T ss_dssp TSEEEEETTSCEEECCEEEESSCCCTTSCEEEEEEECSSCCCEEEEEEEESSCEEESSTTCBCCHHHHTTTBCCEEESSC
T ss_pred CCCeEEeCCCCEEEeeEEecCCCcCCCceEEEEEEEcCCCCcceEEEEecCCcccccCCceEEEeccCCCCcEEEEeCCC
Confidence 3445788999999999998877665 999986332110 0000000000001233899999
Q ss_pred CCCCCCeEEEEEeeeCCCceEeeEEEEEEecCC
Q psy2442 76 RHARDDAVYECVAENGVGDAVSAEASLTVYEGE 108 (111)
Q Consensus 76 ~~~~d~g~y~c~~~~~~~~~~~~~~~l~~~~~~ 108 (111)
.. .|+|.|.|.+.+..+.. ...+.|.|..+|
T Consensus 90 ~~-~D~G~Y~C~~~~~~~~~-~~~~~L~V~~~P 120 (248)
T 3pv7_A 90 QL-EEAGEYRCEVVVTPLKA-QGTVQLEVVASP 120 (248)
T ss_dssp CG-GGCEEEEEEEEETTEEE-EEEEEEEEEBCC
T ss_pred CH-HHCeEEEEEEEeCCccc-eeEEEEEEecCC
Confidence 98 99999999999876653 556677776654
No 316
>2p1y_A Bispecific alpha/beta TCR; autoimmunity, immunoglobulin fold, diabody, immune system; 2.42A {Mus musculus} PDB: 1bwm_A
Probab=99.06 E-value=4.3e-09 Score=58.91 Aligned_cols=79 Identities=19% Similarity=0.336 Sum_probs=54.1
Q ss_pred eEEcCcceeeecCCcEEEEEEEeccCCCeEEEEEC--Ceec--------------cCCCCceEEEeCCCCCeEEEEccCC
Q psy2442 13 ITLRPRNQAVKAGGITSFYCIARGDPIPVIQWRKN--GKRV--------------SGTQSRYMVQEFPPGGSLLRIEPVR 76 (111)
Q Consensus 13 ~~~~~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~--~~~~--------------~~~~~~~~~~~~~~~~~~l~~~~~~ 76 (111)
+.+.+..+.+..|++++|.|. .+.+.+.+.|++. +... .....++...........|.|.++.
T Consensus 3 v~q~p~~~~v~~G~~v~L~C~-~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~ 81 (238)
T 2p1y_A 3 VTQSPRNKVAVTGGKVTLSCN-QTNNHNNMYWYRQDTGHGLRLIHYSYGAGSTEKGDIPDGYKASRPSQENFSLILELAT 81 (238)
T ss_dssp EEEECSEEEEETTCCEEEEEE-ECSCCSEEEEEEEETTTEEEEEEEESSTTCCEECSSCTTCEEECCSSSBCEEEESSCC
T ss_pred ceECccceEEeCCCEEEEEee-cCCCCccEEEEEECCCCCcEEEEEEecCcceeCCCccceEEEEccCCceEEEEEecCC
Confidence 345566778999999999999 7778889999985 2111 0112455544312133459999999
Q ss_pred CCCCCeEEEEEeeeCCC
Q psy2442 77 HARDDAVYECVAENGVG 93 (111)
Q Consensus 77 ~~~d~g~y~c~~~~~~~ 93 (111)
. .|+|.|.|.+.|..+
T Consensus 82 ~-~DsG~Y~C~~~~~~g 97 (238)
T 2p1y_A 82 P-SQTSVYFCASGDLGQ 97 (238)
T ss_dssp G-GGCEEEEEEEEC---
T ss_pred c-ccCeeEEEEEEeCCC
Confidence 8 999999999998643
No 317
>1sq2_N Novel antigen receptor; immunoglobulin fold, protein-protein complex, hydrolase/immune system complex; 1.45A {Ginglymostoma cirratum} SCOP: b.1.1.1 PDB: 1t6v_N
Probab=99.06 E-value=3.5e-09 Score=53.24 Aligned_cols=77 Identities=18% Similarity=0.325 Sum_probs=54.0
Q ss_pred eEEcCcceeeecCCcEEEEEEEeccC--CCeEEEEECC--eec---cCCCCceEEEeC-CCCCeEEEEccCCCCCCCeEE
Q psy2442 13 ITLRPRNQAVKAGGITSFYCIARGDP--IPVIQWRKNG--KRV---SGTQSRYMVQEF-PPGGSLLRIEPVRHARDDAVY 84 (111)
Q Consensus 13 ~~~~~~~~~~~~g~~~~l~c~~~~~~--~~~~~w~~~~--~~~---~~~~~~~~~~~~-~~~~~~l~~~~~~~~~d~g~y 84 (111)
+.+.+..+.+.+|++++|.|...+.+ .+.+.|++.. ... .....|+..... ......|.|.+++. +|+|.|
T Consensus 3 v~q~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~~~~-~DsG~Y 81 (113)
T 1sq2_N 3 VDQTPRSVTKETGESLTINCVLRDASYALGSTCWYRKKSGEGNEESISKGGRYVETVNSGSKSFSLRINDLTV-EDGGTY 81 (113)
T ss_dssp EEEECSEEEECTTCCEEEEEEECSCSSCCCCEEEEEEETTSCCCEECCCBTTEEEEEETTTTEEEEEECSCCG-GGCEEE
T ss_pred eEeCCccEEEecCCCEEEEEEECCCcCCCCEEEEEEeCCCCCceEeEEeCCCEEEEEeCCCCEEEEEECCCCh-hhCEEE
Confidence 34556677889999999999987655 4589999852 221 112245554321 11334599999998 999999
Q ss_pred EEEeee
Q psy2442 85 ECVAEN 90 (111)
Q Consensus 85 ~c~~~~ 90 (111)
.|.+.+
T Consensus 82 ~C~~~~ 87 (113)
T 1sq2_N 82 RCGLGV 87 (113)
T ss_dssp EEEECB
T ss_pred EEEEEe
Confidence 999887
No 318
>3o3u_N Maltose-binding periplasmic protein, advanced Gly END product-specific receptor; RAGE, AGER, scavenger receptor; HET: MLR; 1.50A {Escherichia coli} PDB: 3s59_A 3s58_A 3cjj_A 2l7u_A* 2e5e_A
Probab=99.06 E-value=6.2e-10 Score=69.61 Aligned_cols=88 Identities=23% Similarity=0.359 Sum_probs=63.9
Q ss_pred ceeeecCCcEEEEEEE-eccCCCeEEEEECCeeccCC-----------CCceEEEeCCCCCeEEEEccCCCCCCCeEEEE
Q psy2442 19 NQAVKAGGITSFYCIA-RGDPIPVIQWRKNGKRVSGT-----------QSRYMVQEFPPGGSLLRIEPVRHARDDAVYEC 86 (111)
Q Consensus 19 ~~~~~~g~~~~l~c~~-~~~~~~~~~w~~~~~~~~~~-----------~~~~~~~~~~~~~~~l~~~~~~~~~d~g~y~c 86 (111)
.+.+..|++++|.|.. .+.+.+.+.|++++...... ..+.... ....|.|.+++. .|+|.|.|
T Consensus 375 ~~~~~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~r~~~~----~~~~L~i~~v~~-~D~G~Y~C 449 (581)
T 3o3u_N 375 NITARIGEPLVLKCKGAPKKPPQRLEWKLNTGRTEAWKVLSPQGGGPWDSVARVL----PNGSLFLPAVGI-QDEGIFRC 449 (581)
T ss_dssp EEEEETTSCEEECCTTCCSSSSCEEEEEEEETTSSSCEECCSCCSSGGGGTSEEC----TTSCEEESSCCG-GGCEEEEE
T ss_pred ccceecCCcEEEeeeecCCCCCceEEEEEcCCeeEEEEecccCCCCCcCCcEEEc----CCceEEEecccc-ccCeEEEE
Confidence 3567899999999998 77888899999976522100 1233332 223499999998 99999999
Q ss_pred EeeeCCCceEeeEEEEEEecCCCCC
Q psy2442 87 VAENGVGDAVSAEASLTVYEGEEKP 111 (111)
Q Consensus 87 ~~~~~~~~~~~~~~~l~~~~~~~~p 111 (111)
.+.|..+......+.|.|..+|..|
T Consensus 450 ~~~n~~~~~~~~~~~l~V~~~~~~p 474 (581)
T 3o3u_N 450 QAMNRNGKETKSNYRVRVYQIPGKP 474 (581)
T ss_dssp EEECTTSCEEEEEEEEEEEBCCCCC
T ss_pred EEEcCCCceeEEEEEEEEEcCCCCC
Confidence 9999887643667788887766544
No 319
>2pet_A Lutheran blood group glycoprotein; immunoglobulin superfamily., cell adhesion; 1.70A {Homo sapiens} PDB: 2pf6_A
Probab=99.06 E-value=5.1e-10 Score=62.24 Aligned_cols=89 Identities=21% Similarity=0.327 Sum_probs=62.1
Q ss_pred cCcceeeecCCcEEEEEEEeccCC-CeEEEEECCeecc---------CC---CCceE----------EEeCCCCCeEEEE
Q psy2442 16 RPRNQAVKAGGITSFYCIARGDPI-PVIQWRKNGKRVS---------GT---QSRYM----------VQEFPPGGSLLRI 72 (111)
Q Consensus 16 ~~~~~~~~~g~~~~l~c~~~~~~~-~~~~w~~~~~~~~---------~~---~~~~~----------~~~~~~~~~~l~~ 72 (111)
.+..+.+..|+.+.|.|...+.+. +.+.|++.+.... .. ..++. .. ....|.|
T Consensus 6 ~p~~~~v~~G~~v~L~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~----~~~~L~i 81 (231)
T 2pet_A 6 VPPLVEVMRGKSVILDCTPTGTHDHYMLEWFLTDRSGARPRLASAEMQGSELQVTMHDTRGRSPPYQLD----SQGRLVL 81 (231)
T ss_dssp CCSEEEEETTCCEEECCCCBSCCSEEEEEEEEECTTCCCCEEEEEEEETTEEEEEECCCSCCSSCCEEC----TTCCEEE
T ss_pred CCCcEEEEcCCCEEEecccCCCCCceEEEEEEeCCCceeEEEEeccccCCccccccccccccccccccC----CCceEEE
Confidence 345567889999999999988875 7899997543311 00 01111 11 2223999
Q ss_pred ccCCCCCCCeEEEEEeeeCC-CceEeeEEEEEEecCCCC
Q psy2442 73 EPVRHARDDAVYECVAENGV-GDAVSAEASLTVYEGEEK 110 (111)
Q Consensus 73 ~~~~~~~d~g~y~c~~~~~~-~~~~~~~~~l~~~~~~~~ 110 (111)
.++.. .|.|.|.|.+.+.. +. ....+.|.|..+|..
T Consensus 82 ~~v~~-~D~G~Y~C~~~~~~~~~-~~~~~~l~V~~~p~~ 118 (231)
T 2pet_A 82 AEAQV-GDERDYVCVVRAGAAGT-AEATARLNVFAKPEA 118 (231)
T ss_dssp SSCCG-GGCEEEEEEEECGGGCE-EEEEEEEEEEBCCCC
T ss_pred cccCc-ccCceEEEEEEecCCCc-eEEEEEEEEEecCCC
Confidence 99998 99999999999876 54 467778888777654
No 320
>3tv3_L PGT128 light chain, IG lambda-2 chain C regions; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_L* 3twc_L* 3tnm_L 2mcg_1 1mcw_M 1a8j_L 3mcg_1 1dcl_A 1mcb_A* 1mcc_A* 1mcd_A* 1mce_A* 1mcf_A* 1mch_A 1mci_A* 1mcj_A* 1mck_A 1mcl_A* 1mcn_A* 1mcq_A ...
Probab=99.06 E-value=4.1e-10 Score=62.02 Aligned_cols=91 Identities=15% Similarity=0.300 Sum_probs=58.0
Q ss_pred eeEEec----CCCeeEEcCcceeeecCCcEEEEEEEeccC--CCeEEEEECCeeccCCCCceEEEeCCCC----CeEEEE
Q psy2442 3 RKVRFL----DPPEITLRPRNQAVKAGGITSFYCIARGDP--IPVIQWRKNGKRVSGTQSRYMVQEFPPG----GSLLRI 72 (111)
Q Consensus 3 ~~l~v~----~~p~~~~~~~~~~~~~g~~~~l~c~~~~~~--~~~~~w~~~~~~~~~~~~~~~~~~~~~~----~~~l~~ 72 (111)
+.|.|. .+|.+...+.......|+.+.|.|.+.+.+ .+.+.|+++|..+.............+. ...|.+
T Consensus 100 ~~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~s~L~i 179 (211)
T 3tv3_L 100 TKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSL 179 (211)
T ss_dssp EEEEECCSCCBCCEEEEECCCHHHHHTTCEEEEEEEEEEBSSCCEEEEEETTEEECTTEEECCCEECTTSSEEEEEEEEE
T ss_pred ceEEEeCCCCcCCeeEecCCchhhhcCCCeEEEEEeeeecCCCeEEEEEECCeecCCCcccCCceECCCCCEEEEEEEEE
Confidence 356666 466665554444445799999999998853 4689999999887531000000000001 133777
Q ss_pred ccCCCCCCCeEEEEEeeeCCCc
Q psy2442 73 EPVRHARDDAVYECVAENGVGD 94 (111)
Q Consensus 73 ~~~~~~~d~g~y~c~~~~~~~~ 94 (111)
..... .|.|.|.|.+.|..+.
T Consensus 180 ~~~~~-~d~g~Y~C~v~~~~~~ 200 (211)
T 3tv3_L 180 TPEQW-KSHRSYSCQVTHEGST 200 (211)
T ss_dssp CHHHH-HHSSCEEEEEEETTEE
T ss_pred cHHHh-CCCCeEEEEEEECCCC
Confidence 77766 7899999999998754
No 321
>1qgc_4 Protein (immunoglobulin); virus-antibody complex, icosahedral virus, virus-immune SYST complex; 30.00A {Mus musculus} SCOP: i.6.1.1
Probab=99.05 E-value=2.3e-09 Score=64.76 Aligned_cols=91 Identities=25% Similarity=0.342 Sum_probs=60.4
Q ss_pred eEEcCcceeeecCCcEEEEEEEeccCC----CeEEEEECC--eec-----------cCCCCceEEEeCCCCCeEEEEccC
Q psy2442 13 ITLRPRNQAVKAGGITSFYCIARGDPI----PVIQWRKNG--KRV-----------SGTQSRYMVQEFPPGGSLLRIEPV 75 (111)
Q Consensus 13 ~~~~~~~~~~~~g~~~~l~c~~~~~~~----~~~~w~~~~--~~~-----------~~~~~~~~~~~~~~~~~~l~~~~~ 75 (111)
+...+..+.+..|+.+.|.|.+.+.+. +.+.|++++ ..+ .....++...... ....|.|.++
T Consensus 4 v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~-~~~~L~I~~v 82 (438)
T 1qgc_4 4 LTQSPASLAVSLGQRATISCRASESVDSSGHSFMHWYQQKPGQPPKLLIYRASNLESGIPDRFSGSGSR-TDFTLTIDPV 82 (438)
T ss_dssp EEEECSEEEECTTSCEEEEEEESSCCEETTEECEEEEEECTTSCCEEEESSSSCBCSSCCTTEEEEEET-TEEEEEESSC
T ss_pred eEecCCeEEeeCCCCEEEEEecCCCcccCCcceEEEEEECCCCCcEEEEEECcccCCCccCcEEEEccC-CcEEEEeCCC
Confidence 345566678899999999999888775 379999853 211 0112455443311 3345999999
Q ss_pred CCCCCCeEEEEEeeeCCCceEeeEEEEEEe
Q psy2442 76 RHARDDAVYECVAENGVGDAVSAEASLTVY 105 (111)
Q Consensus 76 ~~~~d~g~y~c~~~~~~~~~~~~~~~l~~~ 105 (111)
.. .|+|.|.|.+.|..+........+.+.
T Consensus 83 ~~-~D~G~Y~C~a~n~~~~~~~~~~~l~V~ 111 (438)
T 1qgc_4 83 EA-DDVATYYCQQSNEVPLTFGAGTKLDLK 111 (438)
T ss_dssp CG-GGCEEEEEEECSSTTCCBCCCEEEEEC
T ss_pred cC-cCCeeEEEEEecCCCccccCceeEEec
Confidence 98 999999999998765322233444443
No 322
>1pew_A JTO2, A lambda-6 type immunoglobulin light chain, domain; beta sheet, immune system; 1.60A {Homo sapiens} SCOP: b.1.1.1 PDB: 1cd0_A 1pw3_A 2cd0_A 2w0k_A 3b5g_A 3bdx_A* 2w0l_A
Probab=99.05 E-value=5.3e-09 Score=52.16 Aligned_cols=74 Identities=19% Similarity=0.379 Sum_probs=51.3
Q ss_pred CcceeeecCCcEEEEEE-EeccC-CCeEEEEECCeecc-----------CCCCceEEEe-CCCCCeEEEEccCCCCCCCe
Q psy2442 17 PRNQAVKAGGITSFYCI-ARGDP-IPVIQWRKNGKRVS-----------GTQSRYMVQE-FPPGGSLLRIEPVRHARDDA 82 (111)
Q Consensus 17 ~~~~~~~~g~~~~l~c~-~~~~~-~~~~~w~~~~~~~~-----------~~~~~~~~~~-~~~~~~~l~~~~~~~~~d~g 82 (111)
+..+.+.+|++++|.|. ..+.+ ...+.|++....+. ....|+.... .......|.|.+++. +|+|
T Consensus 7 p~~~~v~~G~~v~L~C~v~~~~~~~~~v~W~r~~~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~-~DsG 85 (109)
T 1pew_A 7 PHSVSESPGKTVTISCTRSSGNIASNYVQWYQQRSAPITVIYEDNQRPSGVPDRFAGSIDRSSNSASLTISGLKT-EDEA 85 (109)
T ss_dssp CSEEEECTTSCEEEEEEESSSCGGGSCCEEEEC-CCCEEEEBTTTBCCTTCCTTEEEEEETTTTEEEEEECSCCG-GGCE
T ss_pred CCCEEEcCCCCEEEEEEeCCCCCCCccEEEEEECCCCcEEEEecCCcCCCCCCcEEEEeccCCCEEEEEECCCCh-hhCE
Confidence 55678899999999999 76554 46899998762210 0124555442 222334599999998 9999
Q ss_pred EEEEEeeeC
Q psy2442 83 VYECVAENG 91 (111)
Q Consensus 83 ~y~c~~~~~ 91 (111)
.|.|.+.+.
T Consensus 86 ~Y~C~~~~~ 94 (109)
T 1pew_A 86 DYYCQSYDA 94 (109)
T ss_dssp EEEEEEEET
T ss_pred EEEEEEEeC
Confidence 999998874
No 323
>2y23_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin- like; 2.50A {Homo sapiens}
Probab=99.05 E-value=5.6e-09 Score=60.39 Aligned_cols=72 Identities=15% Similarity=0.201 Sum_probs=56.2
Q ss_pred ceeeecCCcEEEEEEEe-ccCCCeEEEEECCeeccCCCCceEEEeC-CCCCeEEEEccCCCCCCCeEEEEEeeeCC
Q psy2442 19 NQAVKAGGITSFYCIAR-GDPIPVIQWRKNGKRVSGTQSRYMVQEF-PPGGSLLRIEPVRHARDDAVYECVAENGV 92 (111)
Q Consensus 19 ~~~~~~g~~~~l~c~~~-~~~~~~~~w~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~d~g~y~c~~~~~~ 92 (111)
...+..|+.+.|.|.+. +.|.+.+.|++++..+... .++.+... ......|.+.++.. .|.|.|.|.+.+..
T Consensus 116 ~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~~~~i~~~-~~~~~~~~~~~~~~~L~i~~~~~-~d~G~Y~C~~~~~~ 189 (312)
T 2y23_A 116 AVEILEKGQVRFWMQAEKLSGNAKVNYIFNEKEIFEG-PKYKMHIDRNTGIIEMFMEKLQD-EDEGTYTFQLQDGK 189 (312)
T ss_dssp EEEECSSSCEEEEEEESCCCSSCEEEEEETTEEECSS-SSCEEEEETTTTEEEEEESCCCG-GGCEEEEEEEESSS
T ss_pred ceEEeeCCCEEEEEEEEeCCCCCEEEEEECCEECeeC-CcEEEEEccCCCEEEEEEccCCc-ccCEeEEEEEEeCC
Confidence 56788999999999998 7888999999999988654 44444322 12334489999998 99999999987644
No 324
>1hnf_A CD2; T lymphocyte adhesion glycoprotein; HET: NAG; 2.50A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1cdb_A 1gya_A* 1qa9_A
Probab=99.05 E-value=1.4e-09 Score=59.08 Aligned_cols=88 Identities=19% Similarity=0.268 Sum_probs=60.3
Q ss_pred cceeeecCCcEEEEEEEec--cCCCeEEEEE--CCeecc---------CCCCceEEEeCCCCCeEEEEccCCCCCCCeEE
Q psy2442 18 RNQAVKAGGITSFYCIARG--DPIPVIQWRK--NGKRVS---------GTQSRYMVQEFPPGGSLLRIEPVRHARDDAVY 84 (111)
Q Consensus 18 ~~~~~~~g~~~~l~c~~~~--~~~~~~~w~~--~~~~~~---------~~~~~~~~~~~~~~~~~l~~~~~~~~~d~g~y 84 (111)
..+....|+++.|.|.... .+.+.+.|++ ++..+. ....|+.+. ....|.|.++.. .|+|.|
T Consensus 7 ~~v~g~~G~sv~L~~~~~~~~~~~~~i~W~k~~~~~~i~~~~~~~~~~~~~~R~~~~----~ngsL~I~~v~~-~DsG~Y 81 (182)
T 1hnf_A 7 LETWGALGQDINLDIPSFQMSDDIDDIKWEKTSDKKKIAQFRKEKETFKEKDTYKLF----KNGTLKIKHLKT-DDQDIY 81 (182)
T ss_dssp EEEEEETTSCEEECCTTCCCCSSEEEEEEEEGGGCCEEEEECGGGCEEESCTTEEEC----TTSCEEECSCCG-GGCEEE
T ss_pred cEEEEecCCCEEEeCCcccccCcCCEEEEEECCCCcEEEEEeCccCCCCCCCeEEEC----CCCCEEECCCCh-hhCEEE
Confidence 3456778999999995432 3456899999 776551 122455544 223599999998 999999
Q ss_pred EEEeeeCCCceE-eeEEEEEEecCCCC
Q psy2442 85 ECVAENGVGDAV-SAEASLTVYEGEEK 110 (111)
Q Consensus 85 ~c~~~~~~~~~~-~~~~~l~~~~~~~~ 110 (111)
.|.+.|..|... ...+.|.|.++...
T Consensus 82 ~c~~~n~~g~~~~~~~~~L~V~~~~~~ 108 (182)
T 1hnf_A 82 KVSIYDTKGKNVLEKIFDLKIQERVSK 108 (182)
T ss_dssp EEEEEETTSCEEEEEEEEEEEECCCCC
T ss_pred EEEEEeCCCceeEEEEEEEEEcCcCCC
Confidence 999999877532 24566777665433
No 325
>2zg1_A Sialic acid-binding IG-like lectin 5; siglec-5 inhibitory receptor, two-domain structure, V-SET, C2-SET, IG-like domain, 6'-sialyllactose complex; HET: SIA; 2.70A {Homo sapiens} PDB: 2zg3_A* 2zg2_A
Probab=99.05 E-value=6.1e-09 Score=57.34 Aligned_cols=94 Identities=20% Similarity=0.181 Sum_probs=60.9
Q ss_pred EcCcceeeecCCcEEEEEEEecc-------CCCeEEEEECCeec----------------cCCCCceEEEeCC-CCCeEE
Q psy2442 15 LRPRNQAVKAGGITSFYCIARGD-------PIPVIQWRKNGKRV----------------SGTQSRYMVQEFP-PGGSLL 70 (111)
Q Consensus 15 ~~~~~~~~~~g~~~~l~c~~~~~-------~~~~~~w~~~~~~~----------------~~~~~~~~~~~~~-~~~~~l 70 (111)
..+..+.+..|+.++|.|...+. +.+.+.|++.+... .....++...... .....|
T Consensus 5 ~~p~~v~v~~G~~v~L~C~~~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~sL 84 (214)
T 2zg1_A 5 QVQKSVTVQEGLCVLVPCSFSYPWRSWYSSPPLYVYWFRDGEIPYYAEVVATNNPDRRVKPETQGRFRLLGDVQKKNCSL 84 (214)
T ss_dssp ECCSEEEEETTCCEEECCEEECCCCCCSCCCCEEEEEEETTCCGGGCCBSEESCTTSCBCTTTTTTEEECSCGGGTBCCE
T ss_pred eCCcEEEEecCccEEEeeeeecCCcccCCCCceEEEEEecCCCCcccceEecCCcccccCccccCceEEeccCCCCeEEE
Confidence 34556788899999999998754 45689999976521 0112344443210 022349
Q ss_pred EEccCCCCCCCeEEEEEeeeCCCceE---eeEEEEEEecCCC
Q psy2442 71 RIEPVRHARDDAVYECVAENGVGDAV---SAEASLTVYEGEE 109 (111)
Q Consensus 71 ~~~~~~~~~d~g~y~c~~~~~~~~~~---~~~~~l~~~~~~~ 109 (111)
.|.++.. .|+|.|.|.+.+..+... ...+.|.|...+.
T Consensus 85 ~I~~v~~-~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~ 125 (214)
T 2zg1_A 85 SIGDARM-EDTGSYFFRVERGRDVKYSYQQNKLNLEVTALIE 125 (214)
T ss_dssp EECSCCG-GGCEEEEEEEEETTTEEEECCSSCEEEEEECCCC
T ss_pred EEccCCH-hhCceEEEEEEcCCCceeeecCCceEEEEecCCC
Confidence 9999998 999999999988653211 1355666665543
No 326
>1jbj_A CD3 epsilon and gamma ectodomain fragment complex; beta-sheet, C2-SET immunoglobulin superfamily, H-bonded G strand PAIR, single-chain; NMR {Mus musculus} SCOP: b.1.1.4 b.1.1.4 PDB: 1xmw_A
Probab=99.05 E-value=4.4e-10 Score=61.06 Aligned_cols=60 Identities=15% Similarity=0.311 Sum_probs=48.2
Q ss_pred eecCCcEEEEEEEeccCCCeEEEEECCeeccCCCCceEEEeCCCCCeEEEEccCCCCCCCeEEEEEeeeCCCc
Q psy2442 22 VKAGGITSFYCIARGDPIPVIQWRKNGKRVSGTQSRYMVQEFPPGGSLLRIEPVRHARDDAVYECVAENGVGD 94 (111)
Q Consensus 22 ~~~g~~~~l~c~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~g~y~c~~~~~~~~ 94 (111)
+..|+++.|.|.+ |.|.+.|+++|..+..... ....|.|..+.. .|+|.|.|.+.|..|.
T Consensus 119 ~~~G~~v~l~C~~---p~p~i~W~k~g~~i~~~~~---------~~~~L~i~~v~~-~D~G~Y~C~a~N~~g~ 178 (186)
T 1jbj_A 119 SRGDGSVLLTCGL---TDKTIKWLKDGSIISPLNA---------TKNTWNLGNNAK-DPRGTYQCQGAKETSN 178 (186)
T ss_dssp CSSSCEEEEECSS---SCSCEEEEETTEECCCSSC---------CSSCCEEEETTS-CCEEEEEEEESSCEEE
T ss_pred cCCCCeEEEEeeC---CCCeEEEEECCEECcccCC---------CcceEEECCCCc-CcCEEEEEEEEcCcCC
Confidence 3489999999988 7789999999998753211 233488899998 9999999999998764
No 327
>1x9q_A SCFV, 4M5.3 anti-fluorescein single chain antibody fragment; VERY high affinity, antibody binding, electrostatics, directed evolution; HET: FLU; 1.50A {Homo sapiens}
Probab=99.04 E-value=1.9e-09 Score=61.56 Aligned_cols=83 Identities=20% Similarity=0.261 Sum_probs=58.3
Q ss_pred CCCeeEEcCcceeeecCCcEEEEEEEeccC-----CCeEEEEECC--eec---c--------CCCCceEEEeCCCCCeEE
Q psy2442 9 DPPEITLRPRNQAVKAGGITSFYCIARGDP-----IPVIQWRKNG--KRV---S--------GTQSRYMVQEFPPGGSLL 70 (111)
Q Consensus 9 ~~p~~~~~~~~~~~~~g~~~~l~c~~~~~~-----~~~~~w~~~~--~~~---~--------~~~~~~~~~~~~~~~~~l 70 (111)
..+.+.+.+..+.+.+|++++|.|...+.+ .+.+.|++.. ..+ . ....++...... ....|
T Consensus 14 ~~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~r~~~~~~~-~~~~L 92 (268)
T 1x9q_A 14 SDVVMTQTPLSLPVSLGDQASISCRSSQSLVHSNGNTYLRWYLQKPGQSPKVLIYKVSNRVSGVPDRFSGSGSG-TDFTL 92 (268)
T ss_dssp CCCCEEEECSEECCCTTCCEEEEEEESSCCBCTTSCBCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEET-TEEEE
T ss_pred ccceEEeeCCeEEecCCCCEEEEeEecCCcccccCCceEEEEEECCCCCCEEEEEecCCCCCCCcccEEEEcCC-CEEEE
Confidence 345566667777889999999999988776 4689999752 211 0 012455544211 33459
Q ss_pred EEccCCCCCCCeEEEEEeeeCCC
Q psy2442 71 RIEPVRHARDDAVYECVAENGVG 93 (111)
Q Consensus 71 ~~~~~~~~~d~g~y~c~~~~~~~ 93 (111)
.|.++.. .|+|.|.|.+.|..+
T Consensus 93 ~I~~v~~-~DsG~Y~C~~~~~~~ 114 (268)
T 1x9q_A 93 KINRVEA-EDLGVYFCSQSTHVP 114 (268)
T ss_dssp EESSCCG-GGCEEEEEEECSSSS
T ss_pred EECCCCh-hHCEEEEEEEecCCC
Confidence 9999998 999999999988643
No 328
>2r15_A Myomesin-1; sarcomeric protein, IG-like domains, homodimer, immunoglobul domain, muscle protein, thick filament, contractIle protein; 2.24A {Homo sapiens}
Probab=99.04 E-value=3.3e-09 Score=58.25 Aligned_cols=75 Identities=15% Similarity=0.136 Sum_probs=55.0
Q ss_pred cCCcEEEEEEEecc-CCCeEEEEECCeeccCCCCceEEEeCCCCCeEEEEccCCCCCCCeEEEEEeeeCCCceEeeEEEE
Q psy2442 24 AGGITSFYCIARGD-PIPVIQWRKNGKRVSGTQSRYMVQEFPPGGSLLRIEPVRHARDDAVYECVAENGVGDAVSAEASL 102 (111)
Q Consensus 24 ~g~~~~l~c~~~~~-~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~g~y~c~~~~~~~~~~~~~~~l 102 (111)
.++.+.|.|.+.+. |.+.+.|++++..+... .++...... ....|.|.++.. .|.|.|.|.+.|..+.. ...+.+
T Consensus 16 ~~~~~~l~C~~~~~~p~~~i~W~~~g~~i~~~-~~~~~~~~~-~~~~L~i~~v~~-~D~G~Y~C~~~n~~~~~-~~~~~l 91 (212)
T 2r15_A 16 TAEGIQLYSFVTYYVEDLKVNWSHNGSAIRYS-DRVKTGVTG-EQIWLQINEPTP-NDKGKYVMELFDGKTGH-QKTVDL 91 (212)
T ss_dssp CSSEEEEEEEBSSCCSSCEEEEEETTEECCCC-SSEEEEEET-TEEEEEEESCCG-GGCEEEEEEEECSSCEE-EEEEEE
T ss_pred cCceEEEEEEEeccCCCceEEEEECCEEccCC-CeEEEEEeC-CEEEEEECCCCc-ccCEEEEEEEecCCcce-EEEEEE
Confidence 56778888988774 47799999999988654 455444322 334589999998 99999999999977653 444444
No 329
>2q87_A CMRF35-H antigen; all-beta, immunoglobulin, IG-superfamily, IG-V, NKP44-like, natural killer cell IG-like receptor, inhibitory receptor; 1.70A {Homo sapiens}
Probab=99.04 E-value=2.5e-09 Score=53.43 Aligned_cols=74 Identities=18% Similarity=0.246 Sum_probs=50.5
Q ss_pred cceeeecCCcEEEEEEEeccC-CCeEEEEECCee--cc------C----CCCceEEEeC-CCCCeEEEEccCCCCCCCeE
Q psy2442 18 RNQAVKAGGITSFYCIARGDP-IPVIQWRKNGKR--VS------G----TQSRYMVQEF-PPGGSLLRIEPVRHARDDAV 83 (111)
Q Consensus 18 ~~~~~~~g~~~~l~c~~~~~~-~~~~~w~~~~~~--~~------~----~~~~~~~~~~-~~~~~~l~~~~~~~~~d~g~ 83 (111)
..+.+.+|++++|.|...... ...+.|++.... .. . ...|+..... ......|.|.++.. +|+|.
T Consensus 4 ~~v~~~~G~~v~L~C~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~~~~-~DsG~ 82 (110)
T 2q87_A 4 RTVAGPVGGSLSVQCPYEKEHRTLNKYWCRPPQIFLCDKIVETKGSAGKRNGRVSIRDSPANLSFTVTLENLTE-EDAGT 82 (110)
T ss_dssp EEEEECTTSCEEEEEECCGGGTTSEEEEESCCSSSSCCCSEESSSTTCSEETTEEEEEEGGGTEEEEEESSCCG-GGCEE
T ss_pred cEEEEeCCCcEEEEeEecCCcCCceEEEEecCCCCCCeEEEEeCCccccccCCEEEEEcCcCCEEEEEEccCCH-HHCEE
Confidence 446788999999999986644 358999986421 10 0 1134444321 11234599999998 99999
Q ss_pred EEEEeeeCC
Q psy2442 84 YECVAENGV 92 (111)
Q Consensus 84 y~c~~~~~~ 92 (111)
|.|.+.+..
T Consensus 83 Y~C~~~~~~ 91 (110)
T 2q87_A 83 YWCGVDTPW 91 (110)
T ss_dssp EEEEEECTT
T ss_pred EEEEEecCc
Confidence 999998875
No 330
>2v5y_A Receptor-type tyrosine-protein phosphatase MU; membrane, hydrolase, glycoprotein, receptor protei tyrosine phosphatase, cell adhesion; HET: NAG; 3.10A {Homo sapiens}
Probab=99.04 E-value=1.8e-09 Score=69.33 Aligned_cols=98 Identities=22% Similarity=0.286 Sum_probs=67.8
Q ss_pred CCCeeEEcCcceeeecCCcEEEEEEEeccCCCeEE-EE--ECCeeccCCCCceEEEeCCCCCeEEEEccCCCCCCCeEEE
Q psy2442 9 DPPEITLRPRNQAVKAGGITSFYCIARGDPIPVIQ-WR--KNGKRVSGTQSRYMVQEFPPGGSLLRIEPVRHARDDAVYE 85 (111)
Q Consensus 9 ~~p~~~~~~~~~~~~~g~~~~l~c~~~~~~~~~~~-w~--~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~g~y~ 85 (111)
.+|.+. .+..+.+..|+.+.|.|.+.+.|.+.+. |+ +++..+... .............|.|.++.. .|.|.|.
T Consensus 164 ~~p~~~-~~~~~~v~~G~~v~l~C~~~g~P~p~i~~W~~~~~g~~l~~~--~~~~~~~~~~~~~l~I~~~~~-~d~g~Y~ 239 (731)
T 2v5y_A 164 RTPHFL-RIQNVEVNAGQFATFQCSAIGRTVAGDRLWLQGIDVRDAPLK--EIKVTSSRRFIASFNVVNTTK-RDAGKYR 239 (731)
T ss_dssp SSCEEC-CCCCEEEETTSCEEEEEEEESCCCTTCEEEEEESSSCCEEEE--EEEECCSSEEEEEEEECSCCT-TTCEEEE
T ss_pred cccccc-cccceEEeCCCcEEEEEEeCCCCCCceeEEEecCCCcccccc--ceEEeccccceEEEEEccccc-ccCeEEE
Confidence 456655 4556788899999999999999998877 77 455554321 111111000124599999998 9999999
Q ss_pred EEeeeCCCceEeeEEEEEEecCCCC
Q psy2442 86 CVAENGVGDAVSAEASLTVYEGEEK 110 (111)
Q Consensus 86 c~~~~~~~~~~~~~~~l~~~~~~~~ 110 (111)
|.+.|..|...+....+.+..+|.+
T Consensus 240 c~A~n~~G~~~s~~~~l~V~~~P~~ 264 (731)
T 2v5y_A 240 CMIRTEGGVGISNYAELVVKEPPVP 264 (731)
T ss_dssp EEEEETTEEEECCCEEEEEECCCCB
T ss_pred EEEECCCCCcceeeEEEEEecCCCC
Confidence 9999998863355666777766654
No 331
>1xt5_A Variable region-containing chitin-binding protein 3; innate immunity, VCBP, primordial antigen receptor, florida lancelet, amphioxus; 1.15A {Branchiostoma floridae}
Probab=99.04 E-value=5.7e-09 Score=53.77 Aligned_cols=89 Identities=22% Similarity=0.242 Sum_probs=57.0
Q ss_pred EcCcceeeecCCcEEEEEEEec---cCCCeEEEEECCeec-----cC----------------------C--CCceEEEe
Q psy2442 15 LRPRNQAVKAGGITSFYCIARG---DPIPVIQWRKNGKRV-----SG----------------------T--QSRYMVQE 62 (111)
Q Consensus 15 ~~~~~~~~~~g~~~~l~c~~~~---~~~~~~~w~~~~~~~-----~~----------------------~--~~~~~~~~ 62 (111)
..+..+.+..|++++|.|.... .+.+.+.|++.+... .. . ..|+.+..
T Consensus 9 ~~~~~v~v~~G~~v~L~C~~~~~~~~~~~~v~W~k~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~ 88 (135)
T 1xt5_A 9 TTHTEVEVHAGGTVELPCSYQLANDTQPPVISWLKGASPDRSTKVFKGNYNWQGEGLGFVESDSYKESFGDFLGRASVAN 88 (135)
T ss_dssp CSCSEEEEETTSCEEECCEEEEETCCSCCEEEEEEESSSSSEEEEEEEEECCCCTTCCCCTTSEEEEECGGGTTTEEESC
T ss_pred CCCceEEEeCCCCEEEeeEeecCCCCCccEEEEEeeCCCCCceEEEEeccccccccccccccccccccChhhcCcEEEec
Confidence 3445567889999999999753 456689999864321 00 0 02333221
Q ss_pred CCCCCeEEEEccCCCCCCCeEEEEEeeeCCCc----eEeeEEEEEEec
Q psy2442 63 FPPGGSLLRIEPVRHARDDAVYECVAENGVGD----AVSAEASLTVYE 106 (111)
Q Consensus 63 ~~~~~~~l~~~~~~~~~d~g~y~c~~~~~~~~----~~~~~~~l~~~~ 106 (111)
. ....|.|.++.. .|+|.|.|.+.+.... .....+.|.|.+
T Consensus 89 -~-~~~sL~I~~v~~-~D~G~Y~C~v~~~~~~~~~g~~~~~~~L~V~g 133 (135)
T 1xt5_A 89 -L-AAPTLRLTHVHP-QDGGRYWCQVAQWSIRTEFGLDAKSVVLKVTG 133 (135)
T ss_dssp -T-TSCCEEECSCCG-GGCEEEEEEEECSSCCSGGGEEEEEEEEEEET
T ss_pred -C-CCCeEEECCCCh-hhCcEEEEEEEcCCccccccccceeEEEEEec
Confidence 1 224499999998 9999999999885321 123556666654
No 332
>1wio_A CD4, T-cell surface glycoprotein CD4; immunoglobulin fold, transmembrane, MHC lipoprotein, polymorphism; 3.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1 b.1.1.3 b.1.1.3 PDB: 1wip_A 1wiq_A 3t0e_E
Probab=99.04 E-value=7.5e-10 Score=65.61 Aligned_cols=75 Identities=15% Similarity=0.221 Sum_probs=56.4
Q ss_pred eeeecCCcEEEEEEEeccCCCeEEEEECCeeccCCCCceEEEeCCCCCeEEEEccCCCCCCCeEEEEEeeeCCCceEeeE
Q psy2442 20 QAVKAGGITSFYCIARGDPIPVIQWRKNGKRVSGTQSRYMVQEFPPGGSLLRIEPVRHARDDAVYECVAENGVGDAVSAE 99 (111)
Q Consensus 20 ~~~~~g~~~~l~c~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~g~y~c~~~~~~~~~~~~~ 99 (111)
..+..|+.+.|.|.+.+.|.+.+.|++++.... . ....|.|.++.. .|.|.|.|.+.|..+. ....
T Consensus 106 ~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~-------~-----~~~~L~i~~v~~-~d~G~Y~C~a~~~~~~-~~~~ 171 (363)
T 1wio_A 106 THLLQGQSLTLTLESPPGSSPSVQCRSPRGKNI-------Q-----GGKTLSVSQLEL-QDSGTWTCTVLQNQKK-VEFK 171 (363)
T ss_dssp SSEESBSCEEEEEECCTTCCCCEEEECSSSCEE-------E-----ESSEEEECSBCG-GGCEECEEEEEETTEE-EEEC
T ss_pred eEEecCCCEEEEEEcCCCCCCeEEEEcCCCccc-------c-----cceEEEEeeCCh-hcCCEEEEEEecCCCe-EEEE
Confidence 367899999999999888888999998764321 1 234488999998 9999999999987544 2445
Q ss_pred EEEEEecCC
Q psy2442 100 ASLTVYEGE 108 (111)
Q Consensus 100 ~~l~~~~~~ 108 (111)
+.+.+...|
T Consensus 172 ~~l~v~~~p 180 (363)
T 1wio_A 172 IDIVVLAFQ 180 (363)
T ss_dssp CEECEECCS
T ss_pred EEEEEecCC
Confidence 555555444
No 333
>2xzc_L FAB A.17 light chain; immune system; HET: XOP; 1.36A {Homo sapiens} PDB: 2xza_L* 3kdm_L* 3nps_C 1dn0_A 1qlr_A* 2v7n_A 3eo0_A 3eo1_A 2agj_L* 2fx7_L 1tzg_L 2fx8_L 2fx9_L* 1u6a_L 3hi1_L* 3kym_A 3kyk_L 3qwo_L* 3ixt_L* 3qeg_L ...
Probab=99.04 E-value=4.6e-09 Score=58.03 Aligned_cols=75 Identities=17% Similarity=0.258 Sum_probs=51.5
Q ss_pred CcceeeecCCcEEEEEEE-eccC-CCeEEEEECCe--ec-----------cCCCCceEEEeCCCCCeEEEEccCCCCCCC
Q psy2442 17 PRNQAVKAGGITSFYCIA-RGDP-IPVIQWRKNGK--RV-----------SGTQSRYMVQEFPPGGSLLRIEPVRHARDD 81 (111)
Q Consensus 17 ~~~~~~~~g~~~~l~c~~-~~~~-~~~~~w~~~~~--~~-----------~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~ 81 (111)
+..+.+..|+.++|.|.+ .+.+ .+.+.|++.+. .+ .....++...... ....|.|.++.. .|+
T Consensus 7 p~~~~v~~G~~v~L~C~v~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~-~~~~L~I~~v~~-~D~ 84 (216)
T 2xzc_L 7 PPSVSAAPGQKVTISCSGSSSNIGNNYVSWYQQLPGTAPKLLIYDNNKRPSGIPDRFSGSKSG-TSATLGITGLQT-GDE 84 (216)
T ss_dssp CSEEEECTTCCEEEEEECCTTTGGGSCCEEEEECTTSCCEEEEBTTTBCCTTCCTTEEEEEET-TEEEEEECSCCG-GGC
T ss_pred CCcEEecCCCeEEEEEEeecCCCCCCeEEEEEeCCCCCcEEEEEecCccCCCCCCceEEeccC-CEEEEEECCCCc-ccC
Confidence 455678899999999995 4432 46899998431 11 0112355443211 334599999998 999
Q ss_pred eEEEEEeeeCCC
Q psy2442 82 AVYECVAENGVG 93 (111)
Q Consensus 82 g~y~c~~~~~~~ 93 (111)
|.|.|.+.|..+
T Consensus 85 G~Y~C~~~~~~~ 96 (216)
T 2xzc_L 85 ADYYCGTWDSSL 96 (216)
T ss_dssp EEEEEEEECTTS
T ss_pred EEEEEEEEeCCC
Confidence 999999998765
No 334
>4gjt_B Poliovirus receptor-related protein 4; six-bladed -propeller, IGV-like fold, viral entry, MV-H, NEC BETA4/BETA5 groove; HET: NAG; 3.10A {Homo sapiens}
Probab=99.03 E-value=1.1e-08 Score=52.13 Aligned_cols=90 Identities=21% Similarity=0.313 Sum_probs=56.4
Q ss_pred EcCcceeeecCCcEEEEEEEeccCCC---eEEEEECCeeccC--------C---------CCceEEEeCC--CCCeEEEE
Q psy2442 15 LRPRNQAVKAGGITSFYCIARGDPIP---VIQWRKNGKRVSG--------T---------QSRYMVQEFP--PGGSLLRI 72 (111)
Q Consensus 15 ~~~~~~~~~~g~~~~l~c~~~~~~~~---~~~w~~~~~~~~~--------~---------~~~~~~~~~~--~~~~~l~~ 72 (111)
..+..+.+..|++++|.|...+.+.. .+.|++....... . ..|+.+.... .....|.|
T Consensus 5 ~~p~~vtv~~G~~v~L~C~~~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I 84 (123)
T 4gjt_B 5 ETSDVVTVVLGQDAKLPCFYRGDSGEQVGQVAWARVDAGEGAQELALLHSKYGLHVSPAYEGRVEQPPPPRNPLDGSVLL 84 (123)
T ss_dssp ECCSEEECCTTSEEEECCEECCCTTCCEEEEEEEECCCSSCCCEEEEECSSSCCCBCGGGTTTEECCCSSCCTTBCCEEE
T ss_pred EcCCEEEEEcCCCEEEEEEEeCCccCceeEEEEEEcCCCCCcceeEEEEecCCcEeCccceeEEEEecCCCcCCEEEEEE
Confidence 34555788899999999998765543 4789985432110 0 1222222111 12234999
Q ss_pred ccCCCCCCCeEEEEEeee-CCCceEeeEEEEEEec
Q psy2442 73 EPVRHARDDAVYECVAEN-GVGDAVSAEASLTVYE 106 (111)
Q Consensus 73 ~~~~~~~d~g~y~c~~~~-~~~~~~~~~~~l~~~~ 106 (111)
.+++. .|+|.|.|.+.+ ..|. ....+.|.|.+
T Consensus 85 ~~v~~-~DsG~Y~C~v~t~~~g~-~~~~~~L~VlE 117 (123)
T 4gjt_B 85 RNAVQ-ADEGEYECRVSTFPAGS-FQARLRLRVLE 117 (123)
T ss_dssp ESCCS-SSCSEEEEEEEESSSCE-EEEEEEEEC--
T ss_pred CCCCh-HHCEEEEEEEEECCCCe-EEeEEEEEEEE
Confidence 99998 999999999876 4454 46677777765
No 335
>2if7_A SLAM family member 6; NTB-A, homophilic receptor, immune system; 3.00A {Homo sapiens}
Probab=99.03 E-value=1.1e-08 Score=55.92 Aligned_cols=64 Identities=19% Similarity=0.280 Sum_probs=43.7
Q ss_pred ecCC-cEEEEEEEecc-CCCeEEEEECCeeccCCCCceEEEeCCCCCeEEEEccCCCCCCCeEEEEEeeeCCCceEeeEE
Q psy2442 23 KAGG-ITSFYCIARGD-PIPVIQWRKNGKRVSGTQSRYMVQEFPPGGSLLRIEPVRHARDDAVYECVAENGVGDAVSAEA 100 (111)
Q Consensus 23 ~~g~-~~~l~c~~~~~-~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~g~y~c~~~~~~~~~~~~~~ 100 (111)
..|. .++|.|.+.+. +.+.+.|++++..+.. ...|.+.......|.|.|.|.+.|..|.. +..+
T Consensus 121 ~~g~~~v~L~C~~~g~~p~p~i~W~~~g~~l~~-------------~~~l~i~~~~~~~d~G~Y~C~a~N~~g~~-s~~~ 186 (193)
T 2if7_A 121 QNMTCELHLTCSVEDADDNVSFRWEALGNTLSS-------------QPNLTVSWDPRISSEQDYTCIAENAVSNL-SFSV 186 (193)
T ss_dssp -CSSEEEEEEEEEESCCTTCEEEEEETTEEEES-------------SSEEEEEECTTTCSCCEEEEEEEETTEEE-EEEE
T ss_pred cCCCceEEEEEEEecCCCceEEEEEeCCEEcCC-------------CCeEEEEeccCcCCCCcEEEEEECCCCcc-cccc
Confidence 3455 89999999885 4779999998876532 11244433332138999999999998764 4443
No 336
>3bqu_C 3H6 FAB light chain; beta sheet, immune system; 3.00A {Mus musculus}
Probab=99.03 E-value=1.6e-10 Score=64.53 Aligned_cols=82 Identities=20% Similarity=0.321 Sum_probs=43.6
Q ss_pred CCeeEEcCcceeeecCCcEEEEEEEeccCCCeEEEEECCe--ec-----------cCCCCceEEEeCCCCCeEEEEccCC
Q psy2442 10 PPEITLRPRNQAVKAGGITSFYCIARGDPIPVIQWRKNGK--RV-----------SGTQSRYMVQEFPPGGSLLRIEPVR 76 (111)
Q Consensus 10 ~p~~~~~~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~~~--~~-----------~~~~~~~~~~~~~~~~~~l~~~~~~ 76 (111)
.+.+...+..+.+..|++++|.|...+.+.+.+.|++.+. .+ .....++.... ......|.|.++.
T Consensus 23 ~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~-~~~~~~L~I~~v~ 101 (233)
T 3bqu_C 23 ETTVTQSPASLSMSIGEKVTIRCITSTDIDDDMNWYQQKPGEPPRLLISDGNTLRPGVPSRFSSSG-YGTDFVFTIENML 101 (233)
T ss_dssp CCCEEEECSBC-------CCEEEEEEEEESSCEEEEEECTTSCCEEEECTTSCBCTTSCTTCCCCE-EEEEEEEC-----
T ss_pred ceeEEEcCCeEEEecCCCEEEEEecCCcCCCeEEEEEECCCCCcEEEEEcCCccCCCCCccEEeec-cCCEEEEEECCCC
Confidence 3445555677788999999999999888777899987431 11 00012222111 0012258889999
Q ss_pred CCCCCeEEEEEeeeCCC
Q psy2442 77 HARDDAVYECVAENGVG 93 (111)
Q Consensus 77 ~~~d~g~y~c~~~~~~~ 93 (111)
. .|+|.|.|.+.|..+
T Consensus 102 ~-~D~G~Y~C~~~~~~~ 117 (233)
T 3bqu_C 102 S-EDVADYYCLQSDNLP 117 (233)
T ss_dssp C-CCCSEEEEEECSSSS
T ss_pred H-HHCEEEEEEEecCCc
Confidence 8 999999999987653
No 337
>2jju_A Signal regulatory protein beta-1; immunoglobulin domain, immunoglobulin superfamily, immune system, transmembrane, paired receptor; 1.19A {Homo sapiens} PDB: 2jjv_A 2uv3_A* 2jjt_A* 2jjs_A* 2jjw_A
Probab=99.02 E-value=6.9e-09 Score=53.15 Aligned_cols=77 Identities=17% Similarity=0.238 Sum_probs=51.1
Q ss_pred EEcCcceeeecCCcEEEEEEEecc-CCCeEEEEECCee----ccCC----CCceEEEe----CCCCCeEEEEccCCCCCC
Q psy2442 14 TLRPRNQAVKAGGITSFYCIARGD-PIPVIQWRKNGKR----VSGT----QSRYMVQE----FPPGGSLLRIEPVRHARD 80 (111)
Q Consensus 14 ~~~~~~~~~~~g~~~~l~c~~~~~-~~~~~~w~~~~~~----~~~~----~~~~~~~~----~~~~~~~l~~~~~~~~~d 80 (111)
.+.+..+.+..|++++|.|...+. +.+.+.|++.+.. +... ..++.... .......|.|.+++. +|
T Consensus 7 ~q~p~~~~v~~G~~vtL~C~~~~~~~~~~v~W~r~~~~~~~li~~~~~~~~~r~~~~~~~~~~~~~~~~L~I~~v~~-~D 85 (127)
T 2jju_A 7 IQPEKSVSVAAGESATLRCAMTSLIPVGPIMWFRGAGAGRELIYNQKEGHFPRVTTVSELTKRNNLDFSISISNITP-AD 85 (127)
T ss_dssp ECCCSEEEEETTSCEEECCEESCCCSCCCEEEEECSSTTCEEEEESSSSCCTTEEEC-------CCBCCEEECSCCG-GG
T ss_pred EeeCCeEEEeCCCCEEEEEEEeCCCCCCEEEEEecCCCCcEEEEECCCCccCcEEeeEeeeecCCCEEEEEECCCCH-HH
Confidence 344556788999999999998765 4568999987521 1100 01332210 001234599999998 99
Q ss_pred CeEEEEEeeeC
Q psy2442 81 DAVYECVAENG 91 (111)
Q Consensus 81 ~g~y~c~~~~~ 91 (111)
+|.|.|.+.+.
T Consensus 86 sG~Y~C~~~~~ 96 (127)
T 2jju_A 86 AGTYYCVKFRK 96 (127)
T ss_dssp CEEEEEEEEEC
T ss_pred CEEEEEEEEcC
Confidence 99999998875
No 338
>1oaq_L Light chain; antibody, allergy, IGE, conformational diversity, multispecificity; 1.50A {Rattus rattus} SCOP: b.1.1.1 PDB: 1ocw_L 2bjm_L* 1oau_L* 1oar_L* 1oaz_L 1mfa_L* 1a6v_L* 1oax_L* 1oay_L* 1a6w_L* 1a6u_L 1dl7_L*
Probab=99.02 E-value=6.7e-09 Score=52.69 Aligned_cols=90 Identities=17% Similarity=0.244 Sum_probs=56.9
Q ss_pred EEcCcceeeecCCcEEEEEEEeccC---CCeEEEEECC--ee---cc--------CCCCceEEEeCCCCCeEEEEccCCC
Q psy2442 14 TLRPRNQAVKAGGITSFYCIARGDP---IPVIQWRKNG--KR---VS--------GTQSRYMVQEFPPGGSLLRIEPVRH 77 (111)
Q Consensus 14 ~~~~~~~~~~~g~~~~l~c~~~~~~---~~~~~w~~~~--~~---~~--------~~~~~~~~~~~~~~~~~l~~~~~~~ 77 (111)
.+++. +.+.+|++++|.|...+.+ ...+.|++.. .. +. ....|+...... ....|.|.+++.
T Consensus 5 ~q~~~-~~~~~G~~v~L~C~~~~~~~~~~~~v~Wyrq~~~~~~~~l~~~~~~~~~~~~~R~~~~~~~-~~~~L~I~~~~~ 82 (120)
T 1oaq_L 5 TQESA-LTTSPGETVTLTCRSSTGAVTTSNYANWVQEKPDHLFTGLIGGTNNRAPGVPARFSGSLIG-NKAALTITGAQT 82 (120)
T ss_dssp EECSE-EEECTTCEEEEEEEETTBCCCGGGCCEEEEEETTTEEEEEEETTTEECTTSCTTEEEEEET-TEEEEEEESCCG
T ss_pred EcCCc-EEEcCCCCEEEEEEeCCCccCCCCEEEEEEeCCCCCCeEEEEEcCccCCCCCCceEEecCC-CeEEEEECCCCh
Confidence 34443 7889999999999987764 4579998742 11 10 012455544322 334599999998
Q ss_pred CCCCeEEEEEeeeCCCceEeeEEEEEEec
Q psy2442 78 ARDDAVYECVAENGVGDAVSAEASLTVYE 106 (111)
Q Consensus 78 ~~d~g~y~c~~~~~~~~~~~~~~~l~~~~ 106 (111)
+|+|.|.|.+.+...........|.|..
T Consensus 83 -~DsG~Y~C~~~~~~~~~fg~gt~L~V~~ 110 (120)
T 1oaq_L 83 -EDEAIYFCALWYSNHLVFGGGTKLTVLG 110 (120)
T ss_dssp -GGCEEEEEEEEETTEEEECCCEEEEECC
T ss_pred -hhCeEEEEEEccCCCcEECCCEEEEEcC
Confidence 9999999998875321112233555544
No 339
>1neu_A Myelin P0 protein; structural protein, glycoprotein, transmembrane, phosphorylation, immunoglobulin fold, signal; 1.90A {Rattus norvegicus} SCOP: b.1.1.1
Probab=99.02 E-value=7.4e-09 Score=52.55 Aligned_cols=93 Identities=14% Similarity=0.154 Sum_probs=56.1
Q ss_pred cCcceeeecCCcEEEEEEEecc----CCCeEEEEECCee------cc-------------CCCCceEEEeC-CCCCeEEE
Q psy2442 16 RPRNQAVKAGGITSFYCIARGD----PIPVIQWRKNGKR------VS-------------GTQSRYMVQEF-PPGGSLLR 71 (111)
Q Consensus 16 ~~~~~~~~~g~~~~l~c~~~~~----~~~~~~w~~~~~~------~~-------------~~~~~~~~~~~-~~~~~~l~ 71 (111)
.+..+.+..|++++|.|..... ....+.|++.+.. +. ....|+.+... ......|.
T Consensus 5 ~~~~v~~~~G~~v~L~C~~~~~~~~~~~~~v~W~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~ 84 (124)
T 1neu_A 5 TDREVYGAVGSQVTLHCSFWSSEWVSDDISFTWRYQPEGGRDAISIFHYAKGQPYIDEVGTFKERIQWVGDPSWKDGSIV 84 (124)
T ss_dssp CCSEEEEETTSCEEECCEEECSSCCCSCCEEEEEEEETTCCCCEEEEEEETTEEEECSSSTTTTCEEECCBGGGTBCCEE
T ss_pred cCCeEEEEeCCeEEEEeEEeCCCCCCCceEEEEEEcCCCCCceEEEEEecCCeeccccCccccCcEEEecCCcCCeEEEE
Confidence 3455678899999999997543 3558999875320 00 00134333211 01223499
Q ss_pred EccCCCCCCCeEEEEEeeeCCCc-eEeeEEEEEEecCCC
Q psy2442 72 IEPVRHARDDAVYECVAENGVGD-AVSAEASLTVYEGEE 109 (111)
Q Consensus 72 ~~~~~~~~d~g~y~c~~~~~~~~-~~~~~~~l~~~~~~~ 109 (111)
|.+++. .|+|.|.|.+.+..+. .....+.|.|...|.
T Consensus 85 I~~v~~-~D~G~Y~C~v~~~~~~~~~~~~v~L~V~~~p~ 122 (124)
T 1neu_A 85 IHNLDY-SDNGTFTCDVKNPPDIVGKTSQVTLYVFEKVP 122 (124)
T ss_dssp ECSCCG-GGCEEEEEEEEC----CCEEEEEEEEEEC---
T ss_pred EccCCh-hhCEEEEEEEEcCCCCcCcEeeEEEEEecCCC
Confidence 999998 9999999999986553 135567777776553
No 340
>1nko_A Sialic acid binding IG-like lectin 7; immunoglobulin, siglec7, immune system; 1.45A {Homo sapiens} SCOP: b.1.1.1 PDB: 2g5r_A* 1o7v_A* 2df3_A* 1o7s_A* 2hrl_A*
Probab=99.02 E-value=5e-09 Score=53.94 Aligned_cols=97 Identities=20% Similarity=0.195 Sum_probs=59.7
Q ss_pred EEcCcceeeecCCcEEEEEEEec-------cCCCeEEEEECCee------ccC----------CCCceEEEeCC-CCCeE
Q psy2442 14 TLRPRNQAVKAGGITSFYCIARG-------DPIPVIQWRKNGKR------VSG----------TQSRYMVQEFP-PGGSL 69 (111)
Q Consensus 14 ~~~~~~~~~~~g~~~~l~c~~~~-------~~~~~~~w~~~~~~------~~~----------~~~~~~~~~~~-~~~~~ 69 (111)
...+..+.+..|++++|.|.... .....+.|++.... +.. ...|+.+.... .....
T Consensus 10 ~q~p~~v~~~~G~~v~L~C~~~~~~~~~~~~~~~~v~W~~~~~~~~~~~~i~~~~~~~~~~~~~~~R~~~~~~~~~~~~s 89 (132)
T 1nko_A 10 LTMQSSVTVQEGMCVHVRCSFSYPVDSDTDSDPVHGYWFRAGNDISWKAPVATNNPAWAVQEETRDRFHLLGDPQTKNCT 89 (132)
T ss_dssp EEECSEEEEETTCCEEECEEEECCCCTTTTTSCCEEEEEEC-----CCSCSEESCTTCCCCGGGTTTEEECSCGGGTBCC
T ss_pred EeCCCEEEEcCCCeEEEEccccCCCccccCCCccEEEEEECCCCCCcccEEEeCCCccccccccCccEEEeCCCCCCceE
Confidence 34566678999999999999863 34568999986432 110 01355543211 12235
Q ss_pred EEEccCCCCCCCeEEEEEeeeCCCc-eE-eeEEEEEEecCCCCC
Q psy2442 70 LRIEPVRHARDDAVYECVAENGVGD-AV-SAEASLTVYEGEEKP 111 (111)
Q Consensus 70 l~~~~~~~~~d~g~y~c~~~~~~~~-~~-~~~~~l~~~~~~~~p 111 (111)
|.|.+++. +|+|.|.|.+.+.... .. ...+.|.|...+..|
T Consensus 90 L~I~~v~~-~DsG~Y~C~v~~~~~~~~~~~~~~~l~V~~~~~~p 132 (132)
T 1nko_A 90 LSIRDARM-SDAGRYFFRMEKGNIKWNYKYDQLSVNVTALTHRP 132 (132)
T ss_dssp EEECSCCG-GGCEEEEEEEEETTEEEECTTSCEEEEEECCC---
T ss_pred EEEcccCc-ccCeeEEEEEEcCCCcccccCCceEEEecccCCCc
Confidence 99999998 9999999998874311 00 235677777777665
No 341
>3u83_A Poliovirus receptor-related protein 1; nectin-1, hinge region plasiticity, cell adhesion; HET: PG6; 2.50A {Homo sapiens} PDB: 3alp_A* 3u82_B 4fmf_A* 3sku_E* 2l7j_A
Probab=99.02 E-value=9.6e-09 Score=59.96 Aligned_cols=96 Identities=18% Similarity=0.263 Sum_probs=63.9
Q ss_pred eeEEecCCCeeEE--cCcceeeecC---CcEEEEEE-EeccCCCeEEEEECCeecc------CCCCceEEEeCCCCCeEE
Q psy2442 3 RKVRFLDPPEITL--RPRNQAVKAG---GITSFYCI-ARGDPIPVIQWRKNGKRVS------GTQSRYMVQEFPPGGSLL 70 (111)
Q Consensus 3 ~~l~v~~~p~~~~--~~~~~~~~~g---~~~~l~c~-~~~~~~~~~~w~~~~~~~~------~~~~~~~~~~~~~~~~~l 70 (111)
+.|.|..+|.+.. ....+.+..| +.+.|.|. ..+.|.+.+.|++++.... .....+. ....|
T Consensus 123 ~~l~V~~~p~~~~~~~~~~~~~~~g~~~~~~~l~C~~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~------~~~~L 196 (331)
T 3u83_A 123 LNLTVMAKPTNWIEGTQAVLRAKKGQDDKVLVATCTSANGKPPSVVSWETRLKGEAEYQEIRNPNGTVT------VISRY 196 (331)
T ss_dssp EEEEEEBCCEEEEEECSSCEEECTTCCCCEEEEEEEEEEEBSCCEEEEEESSCCEEEEEEEECTTSCEE------EEEEE
T ss_pred EEEEEecCCcceeecCCCceeecCCCccceEEEEEEecCCcCCceEEEEcCCCCccccceeECCCCcEE------EEEEE
Confidence 4677777777642 4455667777 77999998 7888999999998522111 0111111 11347
Q ss_pred EEccCCCCCCCeEEEEEeeeCCCceEeeEEEEEEec
Q psy2442 71 RIEPVRHARDDAVYECVAENGVGDAVSAEASLTVYE 106 (111)
Q Consensus 71 ~~~~~~~~~d~g~y~c~~~~~~~~~~~~~~~l~~~~ 106 (111)
.+..+.. .|.|.|.|.+.|..+.. ...+.|.|..
T Consensus 197 ~i~~~~~-~d~G~Y~C~a~n~~~~~-~~~~~l~V~~ 230 (331)
T 3u83_A 197 RLVPSRE-AHQQSLACIVNYHMDRF-KESLTLNVQY 230 (331)
T ss_dssp EECCCGG-GTTCEEEEEEEETTEEE-EEEEECCEEE
T ss_pred EEEeccc-cCCCEEEEEEecCCCcc-eeeEEEEEec
Confidence 7777787 99999999999987653 5555555543
No 342
>1b6u_A KIR2DL3, P58 killer cell inhibitory receptor; natural killer cell, HLA, major histocompatibility complex class I (MHC class I); 3.00A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.01 E-value=8.1e-09 Score=58.94 Aligned_cols=96 Identities=14% Similarity=0.101 Sum_probs=59.7
Q ss_pred cCCCeeEEcCcceeeecCCcEEEEEEEeccCCCeEEEEECCeeccCCCCceEEEeCCCCCeEEEEccCCCCCCCeEEEEE
Q psy2442 8 LDPPEITLRPRNQAVKAGGITSFYCIARGDPIPVIQWRKNGKRVSGTQSRYMVQEFPPGGSLLRIEPVRHARDDAVYECV 87 (111)
Q Consensus 8 ~~~p~~~~~~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~g~y~c~ 87 (111)
..+|.+...+. ..+..|++++|.|...+ +.+.+.|++++..+... ..............|.|.++.. .|+|.|.|.
T Consensus 5 ~~kP~i~~~P~-~~V~~G~~VtL~C~~~~-~~~~~~W~k~g~~~~~~-~~~~~~~~~~~~~~L~I~~v~~-~DsG~Y~C~ 80 (257)
T 1b6u_A 5 HRKPSLLAHPG-PLVKSEETVILQCWSDV-RFQHFLLHREGKFKDTL-HLIGEHHDGVSKANFSIGPMMQ-DLAGTYRCY 80 (257)
T ss_dssp CCCCEECCBSC-SEEESSCCEEEEEEESS-CCSEEEEEEESTTCEEE-EEECBCCTTCEEEEEEECSCCT-TTCEEEEEE
T ss_pred CCCCEEEEcCC-CEecCCCCEEEEEecCC-CCcEEEEEECCCCCCcc-eeeeeccCCCceEEEEeecCCc-ccCEEEEEe
Confidence 44566665555 56889999999999864 45689999987644210 0000000000234589999998 999999999
Q ss_pred eeeCC----CceEeeEEEEEEecC
Q psy2442 88 AENGV----GDAVSAEASLTVYEG 107 (111)
Q Consensus 88 ~~~~~----~~~~~~~~~l~~~~~ 107 (111)
+.+.. ....+..+.|.|.+.
T Consensus 81 a~~~~~~~~~s~~S~~~~L~V~~~ 104 (257)
T 1b6u_A 81 GSVTHSPYQLSAPSDPLDIVITGL 104 (257)
T ss_dssp EECSSCTTSCCCCCCCEEEEEECS
T ss_pred EeccCCCccccccCCCEEEecccC
Confidence 87532 111244556666543
No 343
>3mj6_A Junctional adhesion molecule-like; immunoglobulin tandem domain, cell adhesion, cell junction, glycoprotein, immunoglobulin domain, membrane; HET: NAG FUC; 2.19A {Mus musculus} PDB: 3mj7_A* 3mj9_A*
Probab=99.01 E-value=2.3e-09 Score=60.89 Aligned_cols=88 Identities=17% Similarity=0.356 Sum_probs=58.6
Q ss_pred CcceeeecCCcEEEEEEE---eccCCCeEEEEECCeeccCC---------------------CCceEEEeC-CCCCeEEE
Q psy2442 17 PRNQAVKAGGITSFYCIA---RGDPIPVIQWRKNGKRVSGT---------------------QSRYMVQEF-PPGGSLLR 71 (111)
Q Consensus 17 ~~~~~~~~g~~~~l~c~~---~~~~~~~~~w~~~~~~~~~~---------------------~~~~~~~~~-~~~~~~l~ 71 (111)
+....+..|+.+.|.|.+ .+.|.+.+.|++.+...... ..+...... ......|.
T Consensus 125 p~~~~v~~G~~v~L~C~~~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~ 204 (268)
T 3mj6_A 125 PRDLRVRVGDTTQMRCSIQSTEEKRVTKVNWMFSSGSHTEEETVLSYDSNMRSGKFQSLGRFRNRVDLTGDISRNDGSIK 204 (268)
T ss_dssp CSEEEEETTCCEEECCBCEESSSSCCCEEEEEEECTTCSSCEEEEEEETTSSSCEEECSSTTTTTEEECSCGGGTBCCEE
T ss_pred CCccccccCCcEEEEEEecCCCCCCccceEEEecCCCCCcceeEEEecCCCCccccccccccccceEeeccCCCCeEEEE
Confidence 344678899999999998 56688899999843211000 011111100 01234599
Q ss_pred EccCCCCCCCeEEEEEeeeCCCceEeeEEEEEEec
Q psy2442 72 IEPVRHARDDAVYECVAENGVGDAVSAEASLTVYE 106 (111)
Q Consensus 72 ~~~~~~~~d~g~y~c~~~~~~~~~~~~~~~l~~~~ 106 (111)
|.++.. .|.|.|.|.+.|..|.. ...+.|.|..
T Consensus 205 i~~v~~-~D~G~Y~C~a~n~~g~~-~~~~~l~V~~ 237 (268)
T 3mj6_A 205 LQTVKE-SDQGIYTCSIYVGKLES-RKTIVLHVVQ 237 (268)
T ss_dssp ECSCCG-GGCEEEEEEEEETTEEE-EEEEEEEEEC
T ss_pred ECcCCh-hhCeEEEEEEEcCCceE-EEEEEEEEEc
Confidence 999998 99999999999987763 6777777743
No 344
>3pl6_D MBP peptide / T-cell receptor beta chain chimera; TCR-MHC complex, immunoglobulin fold, immune receptor, membr immune system; HET: NAG; 2.55A {Homo sapiens}
Probab=99.00 E-value=1.5e-08 Score=57.79 Aligned_cols=78 Identities=19% Similarity=0.355 Sum_probs=53.9
Q ss_pred eeEEcCcceeeecCCcEEEEEEEeccCCCeEEEEEC--Ceec------------cC--CC-CceEEEeCCCCCeEEEEcc
Q psy2442 12 EITLRPRNQAVKAGGITSFYCIARGDPIPVIQWRKN--GKRV------------SG--TQ-SRYMVQEFPPGGSLLRIEP 74 (111)
Q Consensus 12 ~~~~~~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~--~~~~------------~~--~~-~~~~~~~~~~~~~~l~~~~ 74 (111)
.+...+..+.+..|++++|.|... .+.+.+.|++. +... .. .. .|+...........|.|.+
T Consensus 28 ~v~~~p~~v~v~~G~~v~L~C~~~-~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~I~~ 106 (268)
T 3pl6_D 28 GVSQTPSNKVTEKGKYVELRCDPI-SGHTALYWYRQSLGQGPEFLIYFQGTGAADDSGLPNDRFFAVRPEGSVSTLKIQR 106 (268)
T ss_dssp SCBCCCSEEEEETTCCEEEEEBCB-TTCCEEEEEEECTTSCCEEEEEEETTEEEECTTCCSTTEEEECTTSSSEEEEECS
T ss_pred eeEeCCCEEEecCCCCEEEEEEeC-CCCceEEEEEECCCCCcEEEEEECCCCccccCCCccCcEEEEecCCCEEEEEECC
Confidence 344556667889999999999876 46678999982 2111 00 01 4555543222345699999
Q ss_pred CCCCCCCeEEEEEeeeC
Q psy2442 75 VRHARDDAVYECVAENG 91 (111)
Q Consensus 75 ~~~~~d~g~y~c~~~~~ 91 (111)
++. .|+|.|.|.+.+.
T Consensus 107 v~~-~D~G~Y~C~~~~~ 122 (268)
T 3pl6_D 107 TER-GDSAVYLCATSAL 122 (268)
T ss_dssp CCG-GGCEEEEEEEESS
T ss_pred CCc-ccCEEEEEEEecC
Confidence 998 9999999999873
No 345
>3r8b_B G5-8, enterotoxin type B; immunoglobulin-like, OB-fold, toxin-immune system complex; 2.95A {Rattus norvegicus}
Probab=99.00 E-value=4.8e-08 Score=49.95 Aligned_cols=79 Identities=20% Similarity=0.386 Sum_probs=54.0
Q ss_pred eeEEcCcceeeecCCcEEEEEEEeccCCCeEEEEEC--Ceec----c--C--------CCCceEEEeCCCCCeEEEEccC
Q psy2442 12 EITLRPRNQAVKAGGITSFYCIARGDPIPVIQWRKN--GKRV----S--G--------TQSRYMVQEFPPGGSLLRIEPV 75 (111)
Q Consensus 12 ~~~~~~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~--~~~~----~--~--------~~~~~~~~~~~~~~~~l~~~~~ 75 (111)
.+.+.+..+.+.+|++++|.|.........+.|++. +..+ . . ...|+...........|.|.++
T Consensus 7 ~V~Q~p~~~~v~~G~~vtL~C~~~~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~~~~Rf~~~~~~~~~~sL~I~~~ 86 (125)
T 3r8b_B 7 AVTQSPRNKVAVTGEKVTLSCKQTNSYFNNMYWYRQDTGHELRLIFMSHGIRNVEKGDIPDGYKASRPSQENFSLILELA 86 (125)
T ss_dssp EEEEECSEEEEETTCCEEEEEEEESCCCSEEEEEEECTTSCEEEEEEESSTTCCEECSSCTTCEEEEEETTEEEEEETTC
T ss_pred cEEecCCeEEEcCCCcEEEEEEECCCCCCeEEEEEECCCCCcEEEEEEcCCccccCCCCCCceEEEecCCCEEEEEECCC
Confidence 445667778899999999999987655558999974 2111 0 0 1234444322123455999999
Q ss_pred CCCCCCeEEEEEeeeC
Q psy2442 76 RHARDDAVYECVAENG 91 (111)
Q Consensus 76 ~~~~d~g~y~c~~~~~ 91 (111)
+. +|+|.|.|.+...
T Consensus 87 ~~-~Dsg~Y~C~~~~~ 101 (125)
T 3r8b_B 87 TP-SQTSVYFCASGGG 101 (125)
T ss_dssp CG-GGCEEEEEEEEET
T ss_pred Ch-hhCEEEEEEEcCC
Confidence 98 9999999998763
No 346
>2xzc_L FAB A.17 light chain; immune system; HET: XOP; 1.36A {Homo sapiens} PDB: 2xza_L* 3kdm_L* 3nps_C 1dn0_A 1qlr_A* 2v7n_A 3eo0_A 3eo1_A 2agj_L* 2fx7_L 1tzg_L 2fx8_L 2fx9_L* 1u6a_L 3hi1_L* 3kym_A 3kyk_L 3qwo_L* 3ixt_L* 3qeg_L ...
Probab=99.00 E-value=4.3e-09 Score=58.17 Aligned_cols=90 Identities=20% Similarity=0.330 Sum_probs=54.8
Q ss_pred eEEec---CCCeeEEcCcceeeecCCcEEEEEEEec-cCCC-eEEEEECCeeccCC-CCceEEEeCCCC----CeEEEEc
Q psy2442 4 KVRFL---DPPEITLRPRNQAVKAGGITSFYCIARG-DPIP-VIQWRKNGKRVSGT-QSRYMVQEFPPG----GSLLRIE 73 (111)
Q Consensus 4 ~l~v~---~~p~~~~~~~~~~~~~g~~~~l~c~~~~-~~~~-~~~w~~~~~~~~~~-~~~~~~~~~~~~----~~~l~~~ 73 (111)
.|.|. .+|.+...+.......|+.+.|.|.+.+ .|.+ .+.|+++|..+... ..........+. ...|.+.
T Consensus 105 ~l~V~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~k~g~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~ 184 (216)
T 2xzc_L 105 KLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLS 184 (216)
T ss_dssp EEEECCCCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCCEEEEEETTEECCSSEEEEECCCCTTTCCEEEEEEEEEE
T ss_pred EEEEcCCCCCCceEEeCCChhhccCCcEEEEEEEEeEcCCceEEEEEECCeecCCCeeEecCcccCCCCCEEEEEEEEEC
Confidence 45554 3455543222222336889999999988 4444 89999999887532 000000000001 1247788
Q ss_pred cCCCCCCCeEEEEEeeeCCCc
Q psy2442 74 PVRHARDDAVYECVAENGVGD 94 (111)
Q Consensus 74 ~~~~~~d~g~y~c~~~~~~~~ 94 (111)
.... .|.|.|.|.+.|....
T Consensus 185 ~~~~-~d~g~Y~C~a~n~~~~ 204 (216)
T 2xzc_L 185 KADY-EKHKVYACEVTHQGLS 204 (216)
T ss_dssp HHHH-TTCCEEEEEEECTTCS
T ss_pred HHHh-CCCCcEEEEEEcCCCC
Confidence 8877 8999999999997643
No 347
>3eow_R Poliovirus receptor; immunoglobulin super family, alternative splicing, cell adhesion, cell membrane, glycoprotein, HOST-virus interaction; 3.50A {Homo sapiens} PDB: 3uro_R 3epc_R* 3epd_R* 3epf_R*
Probab=99.00 E-value=1.3e-09 Score=60.38 Aligned_cols=101 Identities=21% Similarity=0.202 Sum_probs=62.0
Q ss_pred eeEEecCCCeeEEcCcceeeecCCcE-EEEEEEe-ccCCCeEEEEECCeeccCCCCceEEEeCC---CCCeEEEEccCCC
Q psy2442 3 RKVRFLDPPEITLRPRNQAVKAGGIT-SFYCIAR-GDPIPVIQWRKNGKRVSGTQSRYMVQEFP---PGGSLLRIEPVRH 77 (111)
Q Consensus 3 ~~l~v~~~p~~~~~~~~~~~~~g~~~-~l~c~~~-~~~~~~~~w~~~~~~~~~~~~~~~~~~~~---~~~~~l~~~~~~~ 77 (111)
+.|.|..+|.+........ ..|+.+ .|.|.+. +.|.+.+.|++++...... ... ....+ .....|.+.....
T Consensus 109 ~~L~V~~~P~~~~~~~~~~-~~g~~~~~l~C~~~~g~P~p~v~W~k~~~~~~~~-~~~-~~~~~~~~~~~s~L~i~~~~~ 185 (221)
T 3eow_R 109 IWLRVLAKPQNTAEVQKVQ-LTGEPVPMARCVSTGGRPPAQITWHSDLGGMPQT-SQV-PGFLSGTVTVTSLWILVPSSQ 185 (221)
T ss_dssp CCCCCCCCCEEEEEEECCC-CCSSSCCEEEEEEESCSSCCCEEEECSSSCCCCC-EEE-CCCCBTTBCCEEEEECCCCSC
T ss_pred EEEEEEECCCceeecCCcc-cCCceEEEEEEECCCccCCCeeEEEeCCCCCCcc-cee-ecCCCCcEEEEEEEEEeCCHH
Confidence 3456677777764433222 567787 5999987 7888899999864432211 000 00000 0224478888887
Q ss_pred CCCCeEEEEEeeeCCCceEeeEEEEEEecCCCC
Q psy2442 78 ARDDAVYECVAENGVGDAVSAEASLTVYEGEEK 110 (111)
Q Consensus 78 ~~d~g~y~c~~~~~~~~~~~~~~~l~~~~~~~~ 110 (111)
.|.|.|.|.+.|..+.. ...+.+...|..
T Consensus 186 -~d~g~ytC~a~n~~~~~---~~~~~v~~~~~~ 214 (221)
T 3eow_R 186 -VDGKQVTCKVEHESFEK---PQLLTVSLTVYY 214 (221)
T ss_dssp -CCCCCEEEEECCSCSSS---CEEEEECCCCCC
T ss_pred -HCCCeEEEEEECCCCCC---CeEEEEEEEEEc
Confidence 89999999999987542 344455555543
No 348
>3mjg_X Beta-type platelet-derived growth factor receptor; protein-protein complex, growth factor-receptor complex, TRA hormone complex; HET: NDG NAG; 2.30A {Homo sapiens}
Probab=99.00 E-value=1.9e-09 Score=61.89 Aligned_cols=71 Identities=11% Similarity=0.197 Sum_probs=48.7
Q ss_pred cCcceeeecCCcEEEEEEEeccCCCeEEEEECCeeccCCCCceEEEeCCCCCeEEEEccCCCCCCCeEEEEEeeeCCCc
Q psy2442 16 RPRNQAVKAGGITSFYCIARGDPIPVIQWRKNGKRVSGTQSRYMVQEFPPGGSLLRIEPVRHARDDAVYECVAENGVGD 94 (111)
Q Consensus 16 ~~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~g~y~c~~~~~~~~ 94 (111)
....+.+..|+++.|.|.+.+. +.|++++..+. .+............|.|.++.. .|.|.|.|.+.|..|.
T Consensus 6 ~~~~~~v~~G~~v~L~C~~~~~----v~W~~~~~~~~---~~~~~~~~~~~~~~L~i~~~~~-~D~G~Y~C~a~n~~g~ 76 (289)
T 3mjg_X 6 PGPELVLNVSSTFVLTCSGSAP----VVWERMSQEPP---QEMAKAQDGTFSSVLTLTNLTG-LDTGEYFCTHNDSRGL 76 (289)
T ss_dssp SCSEEECCTTCCEEEEEEESSC----CEEEBTTBCCS---EEEEECTTSCEEEEEEECSCCG-GGCEEEEEECCC----
T ss_pred CCCeEEEeCCCcEEEEEeccce----EEEECCCCCcc---cceeccCCCceeEEEEEccCCh-hhCEEEEEEEcccCCC
Confidence 3444678899999999998764 89999988763 2222211000124589999998 9999999999987754
No 349
>1n26_A IL-6 receptor alpha chain; transmembrane, glycoprotein, immunoglobulin domain, cytokine; HET: NAG BMA MAN NDG; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.2.1 b.1.2.1 PDB: 1p9m_C 2arw_A
Probab=98.99 E-value=1.9e-09 Score=63.22 Aligned_cols=87 Identities=18% Similarity=0.282 Sum_probs=60.3
Q ss_pred EcCcceeeecCCcEEEEEEEeccC-CCeEEEEECCeeccCCCCceEEEeCCCCCeEEEEccCCCCCCCeEEEEEeeeCCC
Q psy2442 15 LRPRNQAVKAGGITSFYCIARGDP-IPVIQWRKNGKRVSGTQSRYMVQEFPPGGSLLRIEPVRHARDDAVYECVAENGVG 93 (111)
Q Consensus 15 ~~~~~~~~~~g~~~~l~c~~~~~~-~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~g~y~c~~~~~~~ 93 (111)
.++..+.+..|++++|.|.+.+.+ .+.+.|++++..+.....++.. ....|.|.++.. .|+|.|.|.. .|
T Consensus 11 ~p~~~v~~~~G~~v~l~C~~~~~~~~~~i~W~~~~~~~~~~~~~~~~-----~~~~L~i~~v~~-~d~G~Y~C~~---~g 81 (325)
T 1n26_A 11 VARGVLTSLPGDSVTLTCPGVEPEDNATVHWVLRKPAAGSHPSRWAG-----MGRRLLLRSVQL-HDSGNYSCYR---AG 81 (325)
T ss_dssp CCTTEEEECTTCCEEEECTTSCTTCCSEEEEEEECSSSSCCCEEEEE-----ESSEEEECSCCG-GGCEEEEEES---SS
T ss_pred cCCCcEECCCCCcEEEEeCCCCCCCCceEEEEECCccCCcccccccc-----ccceEEecccch-hhCeEeEEEe---CC
Confidence 334434456899999999987654 6799999877665322122222 234589999998 9999999993 44
Q ss_pred ceEeeEEEEEEecCCCCC
Q psy2442 94 DAVSAEASLTVYEGEEKP 111 (111)
Q Consensus 94 ~~~~~~~~l~~~~~~~~p 111 (111)
.. .....|.|..+|..|
T Consensus 82 ~~-~~~~~L~V~~pP~~P 98 (325)
T 1n26_A 82 RP-AGTVHLLVDVPPEEP 98 (325)
T ss_dssp SC-SCEEEEEECCCCCCC
T ss_pred EE-eeeEEEEeccCCCCC
Confidence 43 566778888777665
No 350
>3s96_B 3B5H10 FAB light chain; huntingtin, immune system; 1.90A {Mus musculus} PDB: 2qhr_L 3ffd_B 4dcq_A
Probab=98.99 E-value=1.7e-09 Score=59.71 Aligned_cols=91 Identities=16% Similarity=0.329 Sum_probs=54.0
Q ss_pred eeEEec----CCCeeEEcCcceeeecCCcEEEEEEEec-cCCC-eEEEEECCeeccCCCCceEEEeCCCC---CeEEEEc
Q psy2442 3 RKVRFL----DPPEITLRPRNQAVKAGGITSFYCIARG-DPIP-VIQWRKNGKRVSGTQSRYMVQEFPPG---GSLLRIE 73 (111)
Q Consensus 3 ~~l~v~----~~p~~~~~~~~~~~~~g~~~~l~c~~~~-~~~~-~~~w~~~~~~~~~~~~~~~~~~~~~~---~~~l~~~ 73 (111)
++|.|. .+|.+...+.......|+.++|.|.+.+ .|.+ .+.|+++|..+............++. ...|.+.
T Consensus 110 ~~l~V~~~~~~~P~~~~~~~~~~~~~~~~v~L~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~s~l~i~ 189 (218)
T 3s96_B 110 TKVTVLGQPKSTPTLTVFPPSSEELKENKATLVCLISNFSPSGVTVAWKANGTPITQGVDTSNPTKEGNKFMASSFLHLT 189 (218)
T ss_dssp EEEEEESCCCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCCEEEEEETTEEC--------------CEEEEEEEEEE
T ss_pred EEEEEecCCCCCceEEeeCCCcccccCCcEEEEEEECcccCCCeEEEEEECCEECcCceecCcccccCCcEEEEEEEEEe
Confidence 356666 4455554333334456789999999988 4556 89999999887532111111100101 1226666
Q ss_pred cCCCCCCCeEEEEEeeeCCCc
Q psy2442 74 PVRHARDDAVYECVAENGVGD 94 (111)
Q Consensus 74 ~~~~~~d~g~y~c~~~~~~~~ 94 (111)
.... .|.|.|.|.+.|..+.
T Consensus 190 ~~~~-~d~g~Y~C~a~n~~~~ 209 (218)
T 3s96_B 190 SDQW-RSHNSFTCQVTHEGDT 209 (218)
T ss_dssp HHHH-HTCSCEEEEEEETTEE
T ss_pred HHHc-cCCCeEEEEEEeCCCc
Confidence 6665 6799999999998754
No 351
>2nms_A CMRF35-like-molecule 1; IG-superfamily, IG-V, NKP44-like, myeloid IG-like receptor, inhibitory receptor, myelo-monocytic cells; 2.60A {Homo sapiens}
Probab=98.99 E-value=4.1e-08 Score=50.16 Aligned_cols=94 Identities=15% Similarity=0.214 Sum_probs=60.2
Q ss_pred cCcceeeecCCcEEEEEEEeccCC-CeEEEEECCee-----c-c--C-----CCCceEEEeCC-CCCeEEEEccCCCCCC
Q psy2442 16 RPRNQAVKAGGITSFYCIARGDPI-PVIQWRKNGKR-----V-S--G-----TQSRYMVQEFP-PGGSLLRIEPVRHARD 80 (111)
Q Consensus 16 ~~~~~~~~~g~~~~l~c~~~~~~~-~~~~w~~~~~~-----~-~--~-----~~~~~~~~~~~-~~~~~l~~~~~~~~~d 80 (111)
.+..+.+.+|++++|.|....... ..+.|++.... + . . ...|+.+.... .....|.|.+++. +|
T Consensus 8 ~p~~v~~~~G~svtL~C~~s~~~~~~~~~W~rq~~~~~~~~li~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~l~~-~D 86 (124)
T 2nms_A 8 GPTTVNGLERGSLTVQCVYRSGWETYLKWWCRGAIWRDCKILVKTSGSEQEVKRDRVSIKDNQKNRTFTVTMEDLMK-TD 86 (124)
T ss_dssp CCSEEEEETTCCEEEEEEECTTCTTSEEEEEESSSSTTCEEEEECCSSSCCEEETTEEEEEETTTTEEEEEECSCCG-GG
T ss_pred cccEEEEeCCCCEEEEeEEeCCcccccEEEEeCCCCCCceEEEEcCCcccceeCCCEEEEEcCcCCEEEEEEeCCCH-HH
Confidence 445578889999999999865433 36899986421 1 1 0 01344443221 1234589999998 99
Q ss_pred CeEEEEEeeeCCCceEeeEEEEEEecCCCCC
Q psy2442 81 DAVYECVAENGVGDAVSAEASLTVYEGEEKP 111 (111)
Q Consensus 81 ~g~y~c~~~~~~~~~~~~~~~l~~~~~~~~p 111 (111)
+|.|.|.+...... ....+.|.|...|.+|
T Consensus 87 sg~Y~C~~~~~~~~-~~~~v~L~V~~~~~~~ 116 (124)
T 2nms_A 87 ADTYWCGIEKTGND-LGVTVQVTIDPAPVTQ 116 (124)
T ss_dssp CEEEEEEEEETTEE-EEEEEEEEEECCC---
T ss_pred CEEEEEEEEcCCCC-ccEEEEEEEeCCCcCC
Confidence 99999998875432 3556777787766543
No 352
>3mj6_A Junctional adhesion molecule-like; immunoglobulin tandem domain, cell adhesion, cell junction, glycoprotein, immunoglobulin domain, membrane; HET: NAG FUC; 2.19A {Mus musculus} PDB: 3mj7_A* 3mj9_A*
Probab=98.99 E-value=4e-09 Score=59.92 Aligned_cols=93 Identities=16% Similarity=0.274 Sum_probs=56.6
Q ss_pred CeeEEcCcceeeecCCcEEEEEEEe---ccCCCeEEEEECCeeccCC-----------------CCceEEEeC-CCCCeE
Q psy2442 11 PEITLRPRNQAVKAGGITSFYCIAR---GDPIPVIQWRKNGKRVSGT-----------------QSRYMVQEF-PPGGSL 69 (111)
Q Consensus 11 p~~~~~~~~~~~~~g~~~~l~c~~~---~~~~~~~~w~~~~~~~~~~-----------------~~~~~~~~~-~~~~~~ 69 (111)
+.+...+..+.+..|+.+.|.|... +.+.+.+.|++.+...... ..++.+... ......
T Consensus 6 ~~v~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~ 85 (268)
T 3mj6_A 6 PGLTVSSPQLRVHVGESVLMGCVVQRTEEKHVDRVDWLFSKDKDDASEYVLFYYSNLSVPTGRFQNRSHLVGDTFHNDGS 85 (268)
T ss_dssp ------CCEEEEETTCCEEECCBCCCSSCCCEEEEEEEEESSSTTCCEEEEEEETTEEEECGGGTTTEEECSCTTTTBCC
T ss_pred cccccCCCceEEecCCcEEEEEEeecCCCCceEEEEEEEeCCCCCceEEEEEEcCCCcccCccccCceEEeecCCCCEEE
Confidence 3444556667889999999999987 5566689999865432111 123322110 012245
Q ss_pred EEEccCCCCCCCeEEEEEeeeCCCce-EeeEEEEEE
Q psy2442 70 LRIEPVRHARDDAVYECVAENGVGDA-VSAEASLTV 104 (111)
Q Consensus 70 l~~~~~~~~~d~g~y~c~~~~~~~~~-~~~~~~l~~ 104 (111)
|.|.++.. .|+|.|.|.+.+..+.. ....+.|.+
T Consensus 86 L~I~~v~~-~D~G~Y~C~~~~~~~~~~~~~~~~l~V 120 (268)
T 3mj6_A 86 LLLQDVQK-ADEGIYTCEIRLKNESMVMKKPVELWV 120 (268)
T ss_dssp EEECSCCG-GGCEEEEEEEEETTCCCEEEEEEEEEE
T ss_pred EEECCCCH-hHCEEEEEEEEecCCcceEEEEEEEEE
Confidence 99999998 99999999999865432 234445544
No 353
>1hxm_B Gamma-delta T-cell receptor; IG domain, TCR, GDTCR, immune system; 3.12A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=98.98 E-value=2e-08 Score=56.54 Aligned_cols=79 Identities=19% Similarity=0.370 Sum_probs=55.1
Q ss_pred eeEEcCcceeeecCCcEEEEEEEecc--CCCeEEEEECC--eec------c---------C-CCCceEEEeCCC-CCeEE
Q psy2442 12 EITLRPRNQAVKAGGITSFYCIARGD--PIPVIQWRKNG--KRV------S---------G-TQSRYMVQEFPP-GGSLL 70 (111)
Q Consensus 12 ~~~~~~~~~~~~~g~~~~l~c~~~~~--~~~~~~w~~~~--~~~------~---------~-~~~~~~~~~~~~-~~~~l 70 (111)
.+.+.+..+.+..|++++|.|...+. +.+.+.|++.. ..+ . . ...|+....... ....|
T Consensus 3 ~v~q~p~~v~~~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L 82 (242)
T 1hxm_B 3 HLEQPQISSTKTLSKTARLECVVSGITISATSVYWYRERPGEVIQFLVSISYDGTVRKESGIPSGKFEVDRIPETSTSTL 82 (242)
T ss_dssp EEECCCSEEEEETTCCEEEEEEEESSCTTTSCEEEEEECTTSCCEEEEEECSSSCEEECTTCCTTSEEEEEETTTTEEEE
T ss_pred ccCcCCceEEecCCCcEEEEEEeCCccccCceEEEEEeCCCCCcEEEEEEecCCceecCCcccCCeEEEEecCCCcEEEE
Confidence 34455667789999999999998875 55689999842 111 0 0 224555543221 23459
Q ss_pred EEccCCCCCCCeEEEEEeeeC
Q psy2442 71 RIEPVRHARDDAVYECVAENG 91 (111)
Q Consensus 71 ~~~~~~~~~d~g~y~c~~~~~ 91 (111)
.|.+++. .|+|.|.|.+.+.
T Consensus 83 ~I~~v~~-~D~G~Y~C~~~~~ 102 (242)
T 1hxm_B 83 TIHNVEK-QDIATYYCALWEA 102 (242)
T ss_dssp EECSCCG-GGCEEEEEEEEEE
T ss_pred EECCCCc-ccCEEEEEeeecC
Confidence 9999998 9999999999875
No 354
>2ptt_A CD48 antigen; CD244, CD48, NK cell receptor, X-RAY, immune system; 1.63A {Mus musculus} PDB: 2ptv_A
Probab=98.98 E-value=8.6e-09 Score=51.42 Aligned_cols=83 Identities=17% Similarity=0.250 Sum_probs=56.1
Q ss_pred cceeeecCCcEEEEEEE-eccCCCeEEEEECCee-cc-------------CCCCceEEEeCCCCCeEEEEccCCCCCCCe
Q psy2442 18 RNQAVKAGGITSFYCIA-RGDPIPVIQWRKNGKR-VS-------------GTQSRYMVQEFPPGGSLLRIEPVRHARDDA 82 (111)
Q Consensus 18 ~~~~~~~g~~~~l~c~~-~~~~~~~~~w~~~~~~-~~-------------~~~~~~~~~~~~~~~~~l~~~~~~~~~d~g 82 (111)
..+.+..|++++|.|.. .+.+.+.+.|++.... +. .-..|+.... ....|.|.+++. +|+|
T Consensus 11 ~~v~~~~G~~v~L~C~~~~~~~~~~v~W~~~~~~~i~~~~~~~~~~~~~~~~~~R~~~~~---~~~sL~I~~v~~-~DsG 86 (110)
T 2ptt_A 11 PDINAYTGSNVTLKIHKDPLGPYRRITWLHTKNQKILEYNYNSTKTIFESEFKGRVYLEE---NNGALHISNVRK-EDKG 86 (110)
T ss_dssp CSEEEETTSCEEECSCSSCCCSCSEEEEEESTTBEEEEEETTSCEEECSSTTTTTEEECT---TTCCEEESSCCG-GGCE
T ss_pred CCEEEecCCcEEEeCCccCCCCcCEEEEEecCCccEEEEECCCCceeeccccCCcEEEeC---CCccEEECCCCc-ccCe
Confidence 34678899999999997 5666678999984221 10 0012444321 234499999998 9999
Q ss_pred EEEEEeeeCCCceEeeEEEEEEec
Q psy2442 83 VYECVAENGVGDAVSAEASLTVYE 106 (111)
Q Consensus 83 ~y~c~~~~~~~~~~~~~~~l~~~~ 106 (111)
.|.|.+.+... ....+.|.|..
T Consensus 87 ~Y~C~v~~~~~--~~~~~~L~V~d 108 (110)
T 2ptt_A 87 TYYMRVLRETE--NELKITLEVFD 108 (110)
T ss_dssp EEEEEEESSSB--CCEEEEEEEEC
T ss_pred EEEEEEEcCCC--cEEEEEEEEEc
Confidence 99999987552 24466676654
No 355
>3juy_B 3B3 single chain variant HIV-1 antibody; envelope protein GP120, broadly neutralizing antibody, 3B3 single chain variable fragment, immune system; 2.50A {Homo sapiens}
Probab=98.98 E-value=2.1e-08 Score=56.84 Aligned_cols=81 Identities=19% Similarity=0.319 Sum_probs=55.8
Q ss_pred CCeeEEcCcceeeecCCcEEEEEEEecc--CCCeEEEEECC--eec----------------cCCCCceEEEeCC-CCCe
Q psy2442 10 PPEITLRPRNQAVKAGGITSFYCIARGD--PIPVIQWRKNG--KRV----------------SGTQSRYMVQEFP-PGGS 68 (111)
Q Consensus 10 ~p~~~~~~~~~~~~~g~~~~l~c~~~~~--~~~~~~w~~~~--~~~----------------~~~~~~~~~~~~~-~~~~ 68 (111)
++.+...+..+.+.+|++++|.|...+. +.+.+.|++.. ..+ .....|+...... ....
T Consensus 6 ~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~ 85 (256)
T 3juy_B 6 HQVQLVQSGAEVKKPGASVKVSCQASGYRFSHFTVHWVRQAPGQRFEWMGWINPYNGNKEFSAKFQDRVTFTADTSANTA 85 (256)
T ss_dssp -CCEEEECCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECTTTTTTEEEEEETTTTEE
T ss_pred ceEEEEecCCceecCCCeEEEEEEeecccccCceEEEEEECCCCCcEEEEEEEcCCCcEeecccCcceEEEEEecCCCEE
Confidence 3455566777889999999999998873 56689999732 110 0112355544211 1234
Q ss_pred EEEEccCCCCCCCeEEEEEeeeC
Q psy2442 69 LLRIEPVRHARDDAVYECVAENG 91 (111)
Q Consensus 69 ~l~~~~~~~~~d~g~y~c~~~~~ 91 (111)
.|.|.++.. .|+|.|.|.+.+.
T Consensus 86 ~L~I~~v~~-~DsG~Y~C~~~~~ 107 (256)
T 3juy_B 86 YMELRSLRS-ADTAVYYCARVGE 107 (256)
T ss_dssp EEEECSCCG-GGCEEEEEEECCC
T ss_pred EEEECCCCc-ccCEEEEEeEEec
Confidence 599999998 9999999999886
No 356
>1hng_A CD2; T lymphocyte adhesion glycoprotein; 2.80A {Rattus rattus} SCOP: b.1.1.1 b.1.1.3
Probab=98.98 E-value=6.6e-10 Score=59.95 Aligned_cols=57 Identities=11% Similarity=0.104 Sum_probs=44.0
Q ss_pred CCcEEEEEEEeccCCCeEEEEECCeeccCCCCceEEEeCCCCCeEEEEccCCCCCCCeEEEEEeeeCCCce
Q psy2442 25 GGITSFYCIARGDPIPVIQWRKNGKRVSGTQSRYMVQEFPPGGSLLRIEPVRHARDDAVYECVAENGVGDA 95 (111)
Q Consensus 25 g~~~~l~c~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~g~y~c~~~~~~~~~ 95 (111)
+..+.|.|.+.+.|.+.+.|++++..+... .+ +.+..+.. .|.|.|.|.+.|..|..
T Consensus 110 ~~~v~L~C~~~g~p~p~i~W~~~g~~l~~~-~~------------~~i~~~~~-~d~G~Y~C~a~N~~g~~ 166 (176)
T 1hng_A 110 CSNATLTCEVLEGTDVELKLYQGKEHLRSL-RQ------------KTMSYQWT-NLRAPFKCKAVNRVSQE 166 (176)
T ss_dssp TTTTEEEEECSSCSSCEEEEEETTEEEEEE-SS------------SEEEEECS-CCSSCEEEEEEETTEEE
T ss_pred CCcEEEEEEecCCCCcEEEEEECCEECCCC-Cc------------EEEEEEEc-cCCeEEEEEEEecCCCc
Confidence 456899999999999999999998876432 11 22335556 89999999999998764
No 357
>2x1w_L Vascular endothelial growth factor receptor 2; hormone-signaling protein complex, angiogenesis, glycoprotein, HOST-virus interaction, membrane; HET: NAG BMA; 2.70A {Homo sapiens} PDB: 2x1x_R*
Probab=98.98 E-value=3.6e-09 Score=58.47 Aligned_cols=81 Identities=10% Similarity=-0.033 Sum_probs=52.9
Q ss_pred CcceeeecC--CcEEEEEEEeccCCCeEEEEEC---CeeccCCCCceEEEeCCCCCeEEEEccCCCCCCCeEEEEEeeeC
Q psy2442 17 PRNQAVKAG--GITSFYCIARGDPIPVIQWRKN---GKRVSGTQSRYMVQEFPPGGSLLRIEPVRHARDDAVYECVAENG 91 (111)
Q Consensus 17 ~~~~~~~~g--~~~~l~c~~~~~~~~~~~w~~~---~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~g~y~c~~~~~ 91 (111)
+..+.+.+| +.+.|.|.+.+ |.+.+.|++. +..+... .++... ....|.|.++.. .|+|.|.|.+.|.
T Consensus 14 p~~v~v~eG~~~~v~L~C~~~~-p~~~v~w~~~~~~g~~~~~~-~~~~~~----~~~~l~I~~v~~-~D~G~Y~C~a~n~ 86 (213)
T 2x1w_L 14 HGVVYITENKNKTVVIPCLGSI-SNLNVSLCARYPEKRFVPDG-NRISWD----SKKGFTIPSYMI-SYAGMVFCEAKIN 86 (213)
T ss_dssp CEEEEECCSTTCEEEECCCBSS-TTCCEEEEEETTTEEECCCS-SSCEEE----TTTEEEEEGGGT-TTCSEEEEEEC--
T ss_pred ceEEEEecCCCccEEEeeccCC-CCcEEEEEhhcCCCccccCC-Cccccc----CCccEEEccCCh-hcCceEEEEEEEC
Confidence 355778889 99999999876 6678999874 5444322 333322 334489999998 9999999999885
Q ss_pred CCceEeeEEEEEE
Q psy2442 92 VGDAVSAEASLTV 104 (111)
Q Consensus 92 ~~~~~~~~~~l~~ 104 (111)
.+...+..+.+.+
T Consensus 87 ~~~~~s~~~~l~v 99 (213)
T 2x1w_L 87 DESYQSIMYIVVV 99 (213)
T ss_dssp --CEECCCEEEEE
T ss_pred CeeEEEEEEEEEE
Confidence 4432222244444
No 358
>3bik_B Programmed cell death protein 1; CO-stimulation, receptor-ligand complex, immunoglobulin-like sandwich, T cell, B cell, programmed death; 2.65A {Mus musculus} SCOP: b.1.1.1
Probab=98.98 E-value=3.7e-08 Score=50.98 Aligned_cols=79 Identities=18% Similarity=0.310 Sum_probs=54.2
Q ss_pred eEEcCcceeeecCCcEEEEEEEeccC-CCeEEEEEC--Ceec------------cCCCCceEEEeC-CCCCeEEEEccCC
Q psy2442 13 ITLRPRNQAVKAGGITSFYCIARGDP-IPVIQWRKN--GKRV------------SGTQSRYMVQEF-PPGGSLLRIEPVR 76 (111)
Q Consensus 13 ~~~~~~~~~~~~g~~~~l~c~~~~~~-~~~~~w~~~--~~~~------------~~~~~~~~~~~~-~~~~~~l~~~~~~ 76 (111)
+.+.+..+.+.+|++++|.|...... ...+.|++. +..+ .....|+..... ......|.|.+++
T Consensus 12 v~Q~p~~v~v~~G~~vtL~C~~~~~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~~Rf~~~~~~~~~~~~L~I~~~~ 91 (134)
T 3bik_B 12 LTFYPAWLTVSEGANATFTCSLSNWSEDLMLNWNRLSPSNQTEKQAAFSNGLSQPVQDARFQIIQLPNRHDFHMNILDTR 91 (134)
T ss_dssp EEEECSEEEEETTSCEEEEEEESSCCTTCEEEEEEECTTCCEEEEEEEETTEEEESSCTTEEEEECTTSSEEEEEECSCC
T ss_pred EEECCCeEEEeCCCCEEEEEEeCCCCCCcEEEEEEcCCCCCceEEEEEcCCCCCcccCCCEEEEecCCCCEEEEEECCCC
Confidence 34556678899999999999987643 458999974 2211 011356655422 2233459999999
Q ss_pred CCCCCeEEEEEeeeCC
Q psy2442 77 HARDDAVYECVAENGV 92 (111)
Q Consensus 77 ~~~d~g~y~c~~~~~~ 92 (111)
. +|+|.|.|.+.+..
T Consensus 92 ~-~Dsg~Y~C~~~~~~ 106 (134)
T 3bik_B 92 R-NDSGIYLCGAISLH 106 (134)
T ss_dssp G-GGCEEEEEEEEECS
T ss_pred h-HHCEEEEEEEEeCC
Confidence 8 99999999987643
No 359
>2wbj_D OB TCR; transmembrane, immune response, T cell receptor, MHC II, MEM receptor, molecular mimicry, multiple sclerosis, immune SYS autoimmunity; HET: NAG BMA MAN; 3.00A {Homo sapiens}
Probab=98.98 E-value=8.8e-09 Score=59.17 Aligned_cols=80 Identities=14% Similarity=0.251 Sum_probs=57.6
Q ss_pred CeeEEcCcceeeecCCcEEEEEEEeccCCCeEEEEECC--eec--------------c--CCCCceEEEeCCCCCeEEEE
Q psy2442 11 PEITLRPRNQAVKAGGITSFYCIARGDPIPVIQWRKNG--KRV--------------S--GTQSRYMVQEFPPGGSLLRI 72 (111)
Q Consensus 11 p~~~~~~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~~--~~~--------------~--~~~~~~~~~~~~~~~~~l~~ 72 (111)
+.+...+..+.+..|++++|.|...+.+.+.+.|++.. ... . ....|+...........|.|
T Consensus 25 ~~v~~~p~~v~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~I 104 (279)
T 2wbj_D 25 AVVSQHPSWVISKSGTSVKIECRSLDFQATTMFWYRQFPKQSLMLMATSNEGSKATYEQGVEKDKFLINHASLTLSTLTV 104 (279)
T ss_dssp CCEEEECSEEEEETTSCEEEEEEESSSCEEEEEEEEECSSSCCEEEEEEESSSCCCCCSSSCSSSEEEEECSSSEEEEEE
T ss_pred ceEEeCCCeEEecCCCeEEEEEEeCCCCCCeEEEEEeCCCCCeEEEEEEecCCcceecCCccCCcEEEEeCCCCEEEEEE
Confidence 45566677788999999999999987777789999853 110 0 01245555432223346999
Q ss_pred ccCCCCCCCeEEEEEeeeC
Q psy2442 73 EPVRHARDDAVYECVAENG 91 (111)
Q Consensus 73 ~~~~~~~d~g~y~c~~~~~ 91 (111)
.+++. .|+|.|.|.+.+.
T Consensus 105 ~~v~~-~D~G~Y~C~~~~~ 122 (279)
T 2wbj_D 105 TSAHP-EDSSFYICSARDL 122 (279)
T ss_dssp SSCCG-GGCEEEEEEEEET
T ss_pred ccCCc-cCCEEEEEEEccc
Confidence 99998 9999999999983
No 360
>1dr9_A B7-1 (CD80), T lymphocyte activation antigen; IG superfamily, immune system; HET: NAG; 3.00A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1i8l_A*
Probab=98.98 E-value=3.7e-09 Score=57.79 Aligned_cols=87 Identities=23% Similarity=0.296 Sum_probs=59.2
Q ss_pred eeeecCCcEEEEEEEe----ccCCCeEEEEECCeeccCC-----------CCceEEEeCCCCCeEEEEccCCCCCCCeEE
Q psy2442 20 QAVKAGGITSFYCIAR----GDPIPVIQWRKNGKRVSGT-----------QSRYMVQEFPPGGSLLRIEPVRHARDDAVY 84 (111)
Q Consensus 20 ~~~~~g~~~~l~c~~~----~~~~~~~~w~~~~~~~~~~-----------~~~~~~~~~~~~~~~l~~~~~~~~~d~g~y 84 (111)
+.+..|+++.|.|... +.+.+.+.|++++..+... ..+..+. .. ....|.|.++.. .|+|.|
T Consensus 4 v~v~~G~~v~L~C~~~~~~~~~~~~~~~W~~~~~~i~~~~~~~~~~~~~~~~r~~~~-~~-~~~~L~I~~v~~-~D~G~Y 80 (201)
T 1dr9_A 4 VTKEVKEVATLSCGHNVSVEELAQTRIYWQKEKKMVLTMMSGDMNIWPEYKNRTIFD-IT-NNLSIVILALRP-SDEGTY 80 (201)
T ss_dssp EEEETTSCEEECCSCCCCTTHHHHCEEEEEETTEEEEEEETTEEEECHHHHTTEEEE-ST-TTTEEEECSCCG-GGCEEE
T ss_pred EEEEeCCCEEEecccCCCcccccccEEEEEeCCcEEEEEeCCceeecCcccceeEEc-cC-CCcEEEEecccc-hhCeEE
Confidence 5678999999999985 3456789999988765200 1122221 11 334599999998 999999
Q ss_pred EEEeeeCCCceE----eeEEEEEEecCCC
Q psy2442 85 ECVAENGVGDAV----SAEASLTVYEGEE 109 (111)
Q Consensus 85 ~c~~~~~~~~~~----~~~~~l~~~~~~~ 109 (111)
.|.+.|..|... ...+.|.|..++.
T Consensus 81 ~C~~~~~~g~~~~~~~~~~~~l~V~~~~~ 109 (201)
T 1dr9_A 81 ECVVLKYEKDAFKREHLAEVTLSVKADFP 109 (201)
T ss_dssp EEEEEECCTTSCEEEEEEEEEEEEECCCC
T ss_pred EEEEEcCCCCccccccccEEEEEEcCCCC
Confidence 999999765432 2456666665543
No 361
>4fmk_A Poliovirus receptor-related protein 2; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA MAN FUC; 2.56A {Mus musculus} PDB: 4fn0_A* 4fs0_A*
Probab=98.98 E-value=1.2e-08 Score=56.12 Aligned_cols=86 Identities=15% Similarity=0.183 Sum_probs=54.1
Q ss_pred ceeeecCCcEEEEEEEeccCCCe---EEEEECCeecc---------------CCCCceEEEeC------CCCCeEEEEcc
Q psy2442 19 NQAVKAGGITSFYCIARGDPIPV---IQWRKNGKRVS---------------GTQSRYMVQEF------PPGGSLLRIEP 74 (111)
Q Consensus 19 ~~~~~~g~~~~l~c~~~~~~~~~---~~w~~~~~~~~---------------~~~~~~~~~~~------~~~~~~l~~~~ 74 (111)
.+.+..|++++|.|.+.+.+.+. +.|++++.... ....+...... ......|.|.+
T Consensus 10 ~V~~~~G~~v~L~C~~~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sL~I~~ 89 (225)
T 4fmk_A 10 EVRGRLGGTVELPCHLLPPTTERVSQVTWQRLDGTVVAAFHPSFGVDFPNSQFSKDRLSFVRARPETNADLRDATLAFRG 89 (225)
T ss_dssp EEEEETTSCEEECCEECSSCCCEEEEEEEECTTSCEEEEEETTTEEECCCTTSCTTTEEECCCSCSCCSSCCBCCEEECS
T ss_pred EEEEecCCCEEEEEEEECCCCCceeEEEEEECCCcceEEEecccceeeccccccccceeeeccccccccccCcEEEEEcc
Confidence 35678899999999998877663 78998754321 00011111100 00223499999
Q ss_pred CCCCCCCeEEEEEeeeCCCceEeeEEEEEEe
Q psy2442 75 VRHARDDAVYECVAENGVGDAVSAEASLTVY 105 (111)
Q Consensus 75 ~~~~~d~g~y~c~~~~~~~~~~~~~~~l~~~ 105 (111)
+.. .|+|.|.|.+.+..+........+.+.
T Consensus 90 v~~-~D~G~Y~C~~~~~~~~~~~~~~~~~~~ 119 (225)
T 4fmk_A 90 LRV-EDEGNYTCEFATFPNGTRRGVTWLRVI 119 (225)
T ss_dssp CCG-GGCEEEEEEEEEETTEEEEEEEEEEEE
T ss_pred CCH-HHCcceEEEEEeCCCcceeeeeeeeee
Confidence 998 999999999988766433333334333
No 362
>3tf7_C 42F3 MUT7 SCFV (42F3 alpha chain, linker, 42F3 BE; IG and MHC, antigen recognition, TCR-PMHC, membrane receptor system; 2.75A {Mus musculus}
Probab=98.97 E-value=7.5e-09 Score=58.74 Aligned_cols=81 Identities=17% Similarity=0.215 Sum_probs=56.5
Q ss_pred eeEEcCcceeeecCCcEEEEEEEeccCCCeEEEEECC--eecc------------CCCCceEEE-eCCCCCeEEEEccCC
Q psy2442 12 EITLRPRNQAVKAGGITSFYCIARGDPIPVIQWRKNG--KRVS------------GTQSRYMVQ-EFPPGGSLLRIEPVR 76 (111)
Q Consensus 12 ~~~~~~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~~--~~~~------------~~~~~~~~~-~~~~~~~~l~~~~~~ 76 (111)
.+.+.+..+.+.+|++++|.|...+.+.+.+.|++.. .... ....++... ........|.|.++.
T Consensus 5 ~v~q~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~sL~I~~v~ 84 (256)
T 3tf7_C 5 SVTQPDARVTVSEGASLQLRCKYSYSATPYLFWYVQYPRQGPQMLLKYYSGDPVVQGVNGFEAEFSKSDSSFHLRKASVH 84 (256)
T ss_dssp EEECSCSEEEEETTSCEEECCEEECSSCCEEEEEEECTTSCCEEEEEECSSCSEEECSTTCEEEEETTTTEEEEEESSCC
T ss_pred EEEecCceEEecCCCeEEEEEEeCCCCCceEEEEEECCCCCeEEEEEEccCCcccccCCCeEEEEcCCCCEEEEEECCCC
Confidence 3445666678999999999999998888899999832 1100 011344432 111133459999999
Q ss_pred CCCCCeEEEEEeeeCCC
Q psy2442 77 HARDDAVYECVAENGVG 93 (111)
Q Consensus 77 ~~~d~g~y~c~~~~~~~ 93 (111)
. .|+|.|.|.+.|..+
T Consensus 85 ~-~DsG~Y~C~~~~~~~ 100 (256)
T 3tf7_C 85 R-SDSAVYFCAVSAKGT 100 (256)
T ss_dssp G-GGCSEEEEEEECTTC
T ss_pred c-ccCEEEEEEEecCCC
Confidence 8 999999999988643
No 363
>2or8_A Hepatitis A virus cellular receptor 1 homolog; beta barrel, immunoglobulin fold, IGV domain, TIM, immune system; 2.50A {Mus musculus}
Probab=98.96 E-value=6e-09 Score=52.36 Aligned_cols=89 Identities=20% Similarity=0.196 Sum_probs=55.7
Q ss_pred CcceeeecCCcEEEEEEEec-cCCCeEEEEECCee--------c--c------CCCCceEEEeC-CCCCeEEEEccCCCC
Q psy2442 17 PRNQAVKAGGITSFYCIARG-DPIPVIQWRKNGKR--------V--S------GTQSRYMVQEF-PPGGSLLRIEPVRHA 78 (111)
Q Consensus 17 ~~~~~~~~g~~~~l~c~~~~-~~~~~~~w~~~~~~--------~--~------~~~~~~~~~~~-~~~~~~l~~~~~~~~ 78 (111)
+..+.+..|++++|.|.... .....+.|++.... + . ....++.+... ......|.|.+++.
T Consensus 4 ~~~v~~~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~sL~I~~v~~- 82 (116)
T 2or8_A 4 YVEVKGVVGHPVTLPCTYSTYRGITTTCWGRGQCPSSACQNTLIWTNGHRVTYQKSSRYNLKGHISEGDVSLTIENSVE- 82 (116)
T ss_dssp CEEEEEETTSCEEECCBCCCTTCCCCEEEEESCCCSSSCTTEEEEECSSSEEEESSTTEECCSCGGGTBCCEEESSCCG-
T ss_pred cceEEEEeCCcEEEEEEeeCCCCCcEEEEEEECCCCCCceEEEEEeCCcccCcCCCCeEEEecCCCCCeEEEEECCCCc-
Confidence 34467889999999999765 33457999987521 0 0 01133332110 11223499999998
Q ss_pred CCCeEEEEEeeeCCCce-EeeEEEEEEec
Q psy2442 79 RDDAVYECVAENGVGDA-VSAEASLTVYE 106 (111)
Q Consensus 79 ~d~g~y~c~~~~~~~~~-~~~~~~l~~~~ 106 (111)
.|+|.|.|.+.+..+.. ....+.|.|..
T Consensus 83 ~DsG~Y~C~v~~~~~~~~~~~~~~l~V~p 111 (116)
T 2or8_A 83 SDSGLYCCRVEIPGWFNDQKVTFSLQVKP 111 (116)
T ss_dssp GGCEEEEEEECCSSTTCCEEEEEEEEEEC
T ss_pred ccCEEEEEEEEcCCcccccEEEEEEEECC
Confidence 99999999998864331 24455555543
No 364
>2rcj_C Light chain; immunoglobulin M, polymeric antibodies, immunology, X-RAY solution scattering, constrained modelling, immune system; NMR {Homo sapiens}
Probab=98.96 E-value=1.3e-08 Score=62.99 Aligned_cols=76 Identities=16% Similarity=0.308 Sum_probs=54.7
Q ss_pred cCcceeeecCCcEEEEEEEeccCCCeEEEEECCe--ecc-----------CCCCceEEEeCCCCCeEEEEccCCCCCCCe
Q psy2442 16 RPRNQAVKAGGITSFYCIARGDPIPVIQWRKNGK--RVS-----------GTQSRYMVQEFPPGGSLLRIEPVRHARDDA 82 (111)
Q Consensus 16 ~~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~~~--~~~-----------~~~~~~~~~~~~~~~~~l~~~~~~~~~d~g 82 (111)
.+..+.+..|+.+.|.|.+.+.+.+.+.|++++. .+. ....++.... ......|.|.++.. .|+|
T Consensus 6 ~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~-~~~~~~L~I~~v~~-~D~G 83 (523)
T 2rcj_C 6 QPPSASGTPGQRVTISCTGTSSGSITVNWYQQLPGMAPKLLIYRDAMRPSGVPTRFSGSK-SGTSASLAISGLEA-EDES 83 (523)
T ss_pred cCCceEEecCCcEEEEEEEeccCCceEEEEEeCCCCCcEEEEEeccccCcccCCcEEEec-CCCEEEEEECCCCh-hhCE
Confidence 3556788999999999999888888999998642 111 0113444221 11334599999998 9999
Q ss_pred EEEEEeeeCCC
Q psy2442 83 VYECVAENGVG 93 (111)
Q Consensus 83 ~y~c~~~~~~~ 93 (111)
.|.|.+.|..|
T Consensus 84 ~Y~C~a~n~~g 94 (523)
T 2rcj_C 84 DYYCASWNSSD 94 (523)
T ss_pred EEEEEEccCCC
Confidence 99999998754
No 365
>2znx_A SCFV; fluorotryptohpan, 5-fluorotryptophan, 19F, single chain FV, allergen, antimicrobial, bacteriolytic enzyme, glycosidase, hydrolase; HET: FTR 1PG; 2.30A {Homo sapiens} PDB: 2znw_A*
Probab=98.96 E-value=1.5e-08 Score=57.10 Aligned_cols=71 Identities=23% Similarity=0.326 Sum_probs=49.4
Q ss_pred eeeecCCcEEEEEEEeccC--CCeEEEEECC--eecc---------------CCCCceEEEeC-CCCCeEEEEccCCCCC
Q psy2442 20 QAVKAGGITSFYCIARGDP--IPVIQWRKNG--KRVS---------------GTQSRYMVQEF-PPGGSLLRIEPVRHAR 79 (111)
Q Consensus 20 ~~~~~g~~~~l~c~~~~~~--~~~~~w~~~~--~~~~---------------~~~~~~~~~~~-~~~~~~l~~~~~~~~~ 79 (111)
..+..|++++|.|.+.+.+ .+.+.|++.. ..+. ....++..... ......|.|.++.. .
T Consensus 132 ~~v~~G~~v~L~C~~~g~~~~~~~v~W~k~~~~~~~~~l~~~~~~g~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~-~ 210 (242)
T 2znx_A 132 SLVKPSQTLSLTCSVTGDSITSDYXSXIRKFPGNRLEYMGYVSYSGSTYYNPSLKSRISITRDTSKNQYYLDLNSVTT-E 210 (242)
T ss_dssp SEECTTSCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSCEEECGGGTTCEEEEEETTTTEEEEEECSCCG-G
T ss_pred ceecCCCeEEEEEEEEccccCCcceeeEeeCCCCCcEEEEEEecCCccccCccccCcEEEEecCCCCEEEEEECCCCc-C
Confidence 4688999999999998765 4689999842 2210 01234444321 11234699999998 9
Q ss_pred CCeEEEEEeeeC
Q psy2442 80 DDAVYECVAENG 91 (111)
Q Consensus 80 d~g~y~c~~~~~ 91 (111)
|+|.|.|.+.|.
T Consensus 211 D~G~Y~C~a~~~ 222 (242)
T 2znx_A 211 DTATYYCANXDG 222 (242)
T ss_dssp GCEEEEEEETTS
T ss_pred cCEEEEEeccCC
Confidence 999999999884
No 366
>3s97_C Contactin-1; carbonic anhdyrase like immunoglobulin, cell adhesion comple adhesion; HET: NAG; 2.30A {Homo sapiens}
Probab=98.96 E-value=2.5e-09 Score=58.18 Aligned_cols=75 Identities=23% Similarity=0.211 Sum_probs=56.2
Q ss_pred cCcceeeecCCcEEEEEE-EeccCC-CeEEEEECCeeccCC-CCceEEEeCCCCCeEEEEccCCCCCCCeEEEEEeeeCC
Q psy2442 16 RPRNQAVKAGGITSFYCI-ARGDPI-PVIQWRKNGKRVSGT-QSRYMVQEFPPGGSLLRIEPVRHARDDAVYECVAENGV 92 (111)
Q Consensus 16 ~~~~~~~~~g~~~~l~c~-~~~~~~-~~~~w~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~d~g~y~c~~~~~~ 92 (111)
.+..+.+..|+.+.|.|. ..+.|. +.+.|++++..+... ..+..... ....|.|.++.. .|.|.|.|.+.+..
T Consensus 14 ~~~~~~v~~G~~v~L~C~~~~~~p~~~~v~W~~~~~~~~~~~~~~~~~~~---~~~~L~i~~v~~-~d~G~Y~C~~~~~~ 89 (201)
T 3s97_C 14 ERPEVRVKEGKGMVLLCDPPYHFPDDLSYRWLLNEFPVFITMDKRRFVSQ---TNGNLYIANVEA-SDKGNYSCFVSSPS 89 (201)
T ss_dssp CCCCEEEETTCCEEECCCCCSEESSCCEEEEEESSTTCBCCCSSSEEECT---TTCCEEESSCCG-GGCEEEEEEEEEGG
T ss_pred CCceEEEECCCCEEEeccccccCCCceEEEEEECCceeeeeeCCCeEEEc---CCCeEEECcCCc-ccCeEEEEEEEecC
Confidence 345578899999999999 888888 899999998776422 12222222 334499999998 99999999999865
Q ss_pred Cc
Q psy2442 93 GD 94 (111)
Q Consensus 93 ~~ 94 (111)
+.
T Consensus 90 ~~ 91 (201)
T 3s97_C 90 IT 91 (201)
T ss_dssp GT
T ss_pred CC
Confidence 43
No 367
>3r0n_A Poliovirus receptor-related protein 2; IG-domain, cell-adhesion molecule, virus entry receptor, STR genomics, PSI-biology; 1.30A {Homo sapiens} PDB: 4dfh_A 4dfi_A
Probab=98.96 E-value=1.1e-08 Score=52.25 Aligned_cols=85 Identities=14% Similarity=0.200 Sum_probs=53.7
Q ss_pred cCcceeeecCCcEEEEEEEeccCCC----eEEEEECC----------------eeccC---CCCceEEEeCC--------
Q psy2442 16 RPRNQAVKAGGITSFYCIARGDPIP----VIQWRKNG----------------KRVSG---TQSRYMVQEFP-------- 64 (111)
Q Consensus 16 ~~~~~~~~~g~~~~l~c~~~~~~~~----~~~w~~~~----------------~~~~~---~~~~~~~~~~~-------- 64 (111)
.+..+.+..|++++|.|.....+.+ .+.|++.. ..... -..|+.+....
T Consensus 8 ~p~~v~~~~G~~v~L~C~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~g~~~~ 87 (128)
T 3r0n_A 8 VLPEVRGQLGGTVELPCHLLPPVPGLYISLVTWQRPDAPANHQNVAAFHPKMGPSFPSPKPGSERLSFVSAKQSTGQDTE 87 (128)
T ss_dssp CCSEEECCTTSCEEECCEEESCCTTCEEEEEEEECTTSCGGGCEEEEEETTTEEECCSSSSCGGGEEESSCBCCCSTTCC
T ss_pred cCCeEEEEcCCCEEEEEEeecCCCCCcEEEEEEEEeCCCCCCeeEEEEecccCcccccccccCCcEEEeccccccccccc
Confidence 3445678899999999998876554 78899862 11111 11344333211
Q ss_pred --CCCeEEEEccCCCCCCCeEEEEEeee-CCCceEeeEEEE
Q psy2442 65 --PGGSLLRIEPVRHARDDAVYECVAEN-GVGDAVSAEASL 102 (111)
Q Consensus 65 --~~~~~l~~~~~~~~~d~g~y~c~~~~-~~~~~~~~~~~l 102 (111)
.....|.|.++.. .|+|.|.|.+.+ ..|. ......|
T Consensus 88 ~~~~~~sL~I~~v~~-~D~G~Y~C~v~~~~~g~-~~~~~~L 126 (128)
T 3r0n_A 88 AELQDATLALHGLTV-EDEGNYTCEFATFPKGS-VRGMTWL 126 (128)
T ss_dssp CBCSBCCEEECSCCG-GGCEEEEEEEEEETTEE-EEEEEEE
T ss_pred cCCCCeEEEEccCCc-hhCeEEEEEEEeCCCCC-cccEEEE
Confidence 0123599999998 999999998765 4343 2444444
No 368
>1itb_B Type 1 interleukin-1 receptor; immunoglobulin fold, transmembrane, glycoprotein, signal, complex (immunoglobulin/receptor); 2.50A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ira_Y* 4dep_B* 1g0y_R
Probab=98.95 E-value=8.6e-09 Score=59.82 Aligned_cols=69 Identities=20% Similarity=0.335 Sum_probs=54.9
Q ss_pred eeeecCCcEEEEEEE------eccCCCeEEEEECCeeccCCCCceEEEeCCCCCeEEEEccCCCCCCCeEEEEEee-eCC
Q psy2442 20 QAVKAGGITSFYCIA------RGDPIPVIQWRKNGKRVSGTQSRYMVQEFPPGGSLLRIEPVRHARDDAVYECVAE-NGV 92 (111)
Q Consensus 20 ~~~~~g~~~~l~c~~------~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~g~y~c~~~-~~~ 92 (111)
..+..|+.+.|.|.+ .+.|.+.+.|++++..+.....++.. ....|.|.++.. .|.|.|.|.+. |..
T Consensus 113 ~~~~~g~~v~l~C~~~~~~~~~g~p~~~i~W~k~~~~l~~~~~~~~~-----~~~~L~i~~v~~-~d~G~Y~C~a~~n~~ 186 (315)
T 1itb_B 113 QKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPLLLDNIHFSG-----VKDRLIVMNVAE-KHRGNYTCHASYTYL 186 (315)
T ss_dssp EEEETTSCEEEECSSCTTTCTTTTCCCCCEEEETTEECCCCSSSEEE-----ETTEEEESSCCG-GGCEEEEEEEEEEET
T ss_pred eEEecCCCeEEEEecccccccCCCCCCEEEEEECCEECCCccceEee-----cCceEEEEecee-hhCcEEEEEEEcCCC
Confidence 356789999999998 78888899999999988644334332 233599999998 99999999999 676
Q ss_pred Cc
Q psy2442 93 GD 94 (111)
Q Consensus 93 ~~ 94 (111)
|.
T Consensus 187 g~ 188 (315)
T 1itb_B 187 GK 188 (315)
T ss_dssp TE
T ss_pred Cc
Confidence 65
No 369
>3nl4_L Antigen binding fragment, immunoglobulin IGG - LI; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_L
Probab=98.95 E-value=4.7e-09 Score=57.79 Aligned_cols=85 Identities=18% Similarity=0.287 Sum_probs=54.6
Q ss_pred eEEe---cCCCeeEEcCcceeeecCCcEEEEEEEec-cCCCeEEEEECCeeccCCC-CceEEEeCCC----CCeEEEEcc
Q psy2442 4 KVRF---LDPPEITLRPRNQAVKAGGITSFYCIARG-DPIPVIQWRKNGKRVSGTQ-SRYMVQEFPP----GGSLLRIEP 74 (111)
Q Consensus 4 ~l~v---~~~p~~~~~~~~~~~~~g~~~~l~c~~~~-~~~~~~~w~~~~~~~~~~~-~~~~~~~~~~----~~~~l~~~~ 74 (111)
.|.| ..+|.+...+....+..|+.++|.|.+.+ .|.+.+.|++++..+.... .......... ....|.+..
T Consensus 105 ~l~V~~~~~~p~v~~~~~~~~~~~g~~v~l~C~~~g~~P~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~ 184 (213)
T 3nl4_L 105 EVGVKGDPVAPTVLIFPPSADLVATGTVTIVCVANKYFPDVTVTWEVDGTTQTTGIENSKTPQNSADCTYNLSSTLTLTS 184 (213)
T ss_dssp EEEEECCCBCCEEEEECCCHHHHTTSEEEEEEEEEEEBSCCEEEEEETTEECCSSEEEEECCCCTTTCCEEEEEEEEEEH
T ss_pred EEEEeCCCcCCeEEEeCCchhhccCCcEeEEEEEecccCCcEEEEEeCCccCCCCeecccCcccCCCCeEEEEEEEEecH
Confidence 4555 34455544333334557999999999988 7888999999998875311 0000000000 113477888
Q ss_pred CCCCCCCeEEEEEee
Q psy2442 75 VRHARDDAVYECVAE 89 (111)
Q Consensus 75 ~~~~~d~g~y~c~~~ 89 (111)
+.. .|.|.|.|.+.
T Consensus 185 ~~~-~d~g~Y~C~a~ 198 (213)
T 3nl4_L 185 TEY-NSHKEYTCKVT 198 (213)
T ss_dssp HHH-HTCCEEEEEEE
T ss_pred HHc-CCCCeEEEEEE
Confidence 887 89999999998
No 370
>1q0x_L FAB 9B1, light chain; anti-morphine antibody, FAB fragment, immune system; HET: PG4; 1.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q0y_L* 1ngp_L* 1ngq_L 3ks0_L* 1gig_L 2vir_A 2vis_A* 2vit_A 1sm3_L 4a6y_L 1ind_L* 1ine_L* 1yuh_L* 2zpk_L 3rhw_K* 3ri5_K* 3ria_K* 3rif_K* 1mfe_L* 1mfb_L* ...
Probab=98.95 E-value=7.8e-09 Score=56.92 Aligned_cols=84 Identities=14% Similarity=0.247 Sum_probs=52.4
Q ss_pred CCCeeEEcCcceeeecCCcEEEEEEEeccCCC--eEEEEECCeeccCCCCceEEEeC-CC---CCeEEEEccCCCCCCCe
Q psy2442 9 DPPEITLRPRNQAVKAGGITSFYCIARGDPIP--VIQWRKNGKRVSGTQSRYMVQEF-PP---GGSLLRIEPVRHARDDA 82 (111)
Q Consensus 9 ~~p~~~~~~~~~~~~~g~~~~l~c~~~~~~~~--~~~w~~~~~~~~~~~~~~~~~~~-~~---~~~~l~~~~~~~~~d~g 82 (111)
.+|.+...+.......|+.++|.|.+.+.+++ .+.|+++|..+............ ++ ....|.+..... .|.|
T Consensus 114 ~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~-~d~g 192 (212)
T 1q0x_L 114 SSPTVTLFPPSSEELSTAKATLVCTITDFYPGVVTVDWKVDGTPVTAGMETTQPSKQSNNKYMASSYLTLTARAW-ERHS 192 (212)
T ss_dssp BCCEEEEECCCHHHHTTTEEEEEEEEEEEBSSCCEEEEEETTEEECTTEEECCCEECTTSCEEEEEEEEEEHHHH-TTCC
T ss_pred CCCeeEEeCCCHHHccCCcEEEEEEEEEEeCCCeEEEEEECCEeCCCCeecCCceeCCCCCEEEEEEEEEcHHHc-cCCC
Confidence 35555443332234468899999999885443 89999999887532100000111 10 112377777776 8999
Q ss_pred EEEEEeeeCCC
Q psy2442 83 VYECVAENGVG 93 (111)
Q Consensus 83 ~y~c~~~~~~~ 93 (111)
.|.|.+.|...
T Consensus 193 ~Y~C~a~n~~~ 203 (212)
T 1q0x_L 193 SYSCQVTHEGH 203 (212)
T ss_dssp EEEEEEEETTE
T ss_pred cEEEEEEeCCc
Confidence 99999999753
No 371
>2d9q_B Granulocyte colony-stimulating factor receptor; cytokine, ligand-receptor complex, signaling protein-cytokin; HET: NAG; 2.80A {Homo sapiens} SCOP: b.1.1.3 b.1.2.1 b.1.2.1
Probab=98.95 E-value=4.1e-09 Score=61.47 Aligned_cols=89 Identities=17% Similarity=0.215 Sum_probs=61.1
Q ss_pred cceeeecCCcEEEEEEEecc-----CCCeEEEEECCeeccCCCCceEEEeCCCC-CeEEEEccCCCCCCCeEEEEEeeeC
Q psy2442 18 RNQAVKAGGITSFYCIARGD-----PIPVIQWRKNGKRVSGTQSRYMVQEFPPG-GSLLRIEPVRHARDDAVYECVAENG 91 (111)
Q Consensus 18 ~~~~~~~g~~~~l~c~~~~~-----~~~~~~w~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~~~~d~g~y~c~~~~~ 91 (111)
....+..|+.++|.|.+.+. +.+.+.|.+++..+.. .++... .++. ...|.|.++.. .|.|.|.|.+.+.
T Consensus 8 ~~~~v~~G~~v~l~C~~~~~~~~~~~~~~i~W~~~g~~l~~--~~~~~~-~~~~~~~~L~i~~~~~-~d~g~y~c~~~~~ 83 (313)
T 2d9q_B 8 SAPIVHLGDPITASCIIKQNCSHLDPEPQILWRLGAELQPG--GRQQRL-SDGTQESIITLPHLNH-TQAFLSCSLNWGN 83 (313)
T ss_dssp SCSEECTTCCEEEEECCCTTSCSSCSCSCCEEESSSCBCTT--CEECCC-SSSCCCEEEEESCCCS-SEEEEEEEEESSS
T ss_pred CCcEEcCCCCEEEEEEECCCCCCCCcccceEEEeCCEECCc--cceEEE-ecCeEEEEEEEeccCC-CccceEEeeecCC
Confidence 34578899999999999886 5678999999887743 222111 1111 15599999998 9999999987654
Q ss_pred CCceEeeEEEEEEecCCCCC
Q psy2442 92 VGDAVSAEASLTVYEGEEKP 111 (111)
Q Consensus 92 ~~~~~~~~~~l~~~~~~~~p 111 (111)
.+. ......|.+..+|..|
T Consensus 84 ~~~-~~~~~~l~v~~~P~~P 102 (313)
T 2d9q_B 84 SLQ-ILDQVELRAGYPPAIP 102 (313)
T ss_dssp SEE-EEEEEEEEECCCCCCC
T ss_pred Cce-eEEEEEEccCCCCCCC
Confidence 332 2445666666677655
No 372
>2atp_B T-cell surface glycoprotein CD8 beta chain; CD8AB, CD8AA, MHC, immune system; HET: NAG; 2.40A {Mus musculus} SCOP: b.1.1.1 PDB: 3b9k_B*
Probab=98.94 E-value=3.2e-08 Score=49.74 Aligned_cols=75 Identities=19% Similarity=0.349 Sum_probs=52.2
Q ss_pred EcCcceeeecCCcEEEEEEEecc-CCCeEEEEECCe-----e---c---cC----------CCCceEEEeC-CCCCeEEE
Q psy2442 15 LRPRNQAVKAGGITSFYCIARGD-PIPVIQWRKNGK-----R---V---SG----------TQSRYMVQEF-PPGGSLLR 71 (111)
Q Consensus 15 ~~~~~~~~~~g~~~~l~c~~~~~-~~~~~~w~~~~~-----~---~---~~----------~~~~~~~~~~-~~~~~~l~ 71 (111)
+.+..+.+.+|++++|.|...+. ....+.|++... . + .. ...|+..... ......|.
T Consensus 3 Q~p~~~~~~~G~~vtL~C~~~~~~~~~~v~W~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~ 82 (115)
T 2atp_B 3 QTPSSLLVQTNHTAKMSCEVKSISKLTSIYWLRERQDPKDKYFEFLASWSSSKGVLYGESVDKKRNIILESSDSRRPFLS 82 (115)
T ss_dssp EECSEEEECTTSCEEEEEECCSSCCSSEEEEEEEEECSSCEEEEEEEEEETTTEEEECGGGTTTCCEEEESTTSSSCEEE
T ss_pred cCCCCEEEcCCCcEEEEEEecCCCCcccEEEEEeCCCCCCCccEEEEEEeCCCCeEecCCCccCcEEEEEeCCCCEEEEE
Confidence 44566788999999999998764 455899987532 1 1 00 1246655542 22334599
Q ss_pred EccCCCCCCCeEEEEEeee
Q psy2442 72 IEPVRHARDDAVYECVAEN 90 (111)
Q Consensus 72 ~~~~~~~~d~g~y~c~~~~ 90 (111)
|.+++. +|+|.|.|.+..
T Consensus 83 I~~~~~-~DsG~Y~C~~~~ 100 (115)
T 2atp_B 83 IMNVKP-EDSDFYFCATVG 100 (115)
T ss_dssp ECSCCG-GGCEEEEEEEEC
T ss_pred ECCCCH-HHCEEEEEeEcc
Confidence 999998 999999999875
No 373
>1mju_H Immunoglobulin MS6-12; catalytic antibody, ester hydrolysis, esterolytic, FAB, immune system; 1.22A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mjj_B 1mie_H 1mj7_H* 1mj8_H 1mh5_B* 4aeh_H 2y5t_A 2vwe_E 2op4_H 2ntf_H 3loh_C 1e4x_H 2vl5_A 1e4x_I 1e4w_H 3opz_H 3oz9_H 1plg_H 1hi6_B 1cfn_B ...
Probab=98.94 E-value=1.5e-08 Score=56.62 Aligned_cols=74 Identities=22% Similarity=0.372 Sum_probs=52.0
Q ss_pred CcceeeecCCcEEEEEEEeccC--CCeEEEEECC--eec------cC----------CCCceEEEeCC-CCCeEEEEccC
Q psy2442 17 PRNQAVKAGGITSFYCIARGDP--IPVIQWRKNG--KRV------SG----------TQSRYMVQEFP-PGGSLLRIEPV 75 (111)
Q Consensus 17 ~~~~~~~~g~~~~l~c~~~~~~--~~~~~w~~~~--~~~------~~----------~~~~~~~~~~~-~~~~~l~~~~~ 75 (111)
+..+.+..|++++|.|...+.+ .+.+.|++.. ..+ .. ...|+...... .....|.|.++
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v 86 (227)
T 1mju_H 7 PGAELVKPGASVKLSCKASGYTFTNYWINWVKQRPGQGLEWIGNIYPGSSYTHYNEKFKNKATLTVDTSSSTAYMQLSSL 86 (227)
T ss_dssp CSEEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEEETTTTEEEECGGGTTTEEEEEETTTTEEEEEECSC
T ss_pred CCCeEEcCCCCEEEEEEecCCccccceEEEEEeCCCCCcEEEEEEeccCCceeeCCccCCcEEEEEeCCCCeEEEEECCC
Confidence 4456788999999999998765 5689999853 211 00 02455544321 13345999999
Q ss_pred CCCCCCeEEEEEeeeC
Q psy2442 76 RHARDDAVYECVAENG 91 (111)
Q Consensus 76 ~~~~d~g~y~c~~~~~ 91 (111)
+. .|+|.|.|.+.+.
T Consensus 87 ~~-~D~G~Y~C~~~~~ 101 (227)
T 1mju_H 87 TS-DDSAVYYCANKLG 101 (227)
T ss_dssp CG-GGCEEEEEEEEET
T ss_pred Cc-ccCEEEEEEECCC
Confidence 98 9999999999875
No 374
>2dru_A Chimera of CD48 antigen and T-cell surface antige; CD2 binding domain of CD48, immune system; HET: NAG; 2.60A {Rattus norvegicus}
Probab=98.94 E-value=1.7e-08 Score=54.59 Aligned_cols=88 Identities=17% Similarity=0.249 Sum_probs=59.4
Q ss_pred cceeeecCCcEEEEEEEec-cCCCeEEEEEC-Ceecc---C--------C--CCceEEEeCCCCCeEEEEccCCCCCCCe
Q psy2442 18 RNQAVKAGGITSFYCIARG-DPIPVIQWRKN-GKRVS---G--------T--QSRYMVQEFPPGGSLLRIEPVRHARDDA 82 (111)
Q Consensus 18 ~~~~~~~g~~~~l~c~~~~-~~~~~~~w~~~-~~~~~---~--------~--~~~~~~~~~~~~~~~l~~~~~~~~~d~g 82 (111)
..+.+..|++++|.|.... .+.+.+.|++. +..+. . . ..|+.+.. ....|.|.+++. .|+|
T Consensus 7 ~~v~v~~G~~vtL~c~~~~~~~~~~i~W~k~~~~~i~~~~~~~~~~~~~~~~~~R~~l~~---~~~sL~I~~v~~-~D~G 82 (180)
T 2dru_A 7 PNVNAITGSNVTLTILKHPLASYQRLTWLHTTNQKILEYFPNGKKTVFESVFKDRVDLDK---TNGALRIYNVSK-EDRG 82 (180)
T ss_dssp CEEEEETTSCEEECCCSSCCCSCSEEEEESSSSCEEEEECSSSCEEECSSTTTTTEEECT---TTCCEEECSCCG-GGCE
T ss_pred ceEEEEeCCCEEEeCCCCCCCceeEEEEEecCCeEEEEEECCCCeeEcchhcCCeEEEeC---CCccEEEcCCCH-HHCe
Confidence 3467889999999998744 33568999984 22111 0 1 13444411 334499999998 9999
Q ss_pred EEEEEeeeCCCceEeeEEEEEEecCCCCC
Q psy2442 83 VYECVAENGVGDAVSAEASLTVYEGEEKP 111 (111)
Q Consensus 83 ~y~c~~~~~~~~~~~~~~~l~~~~~~~~p 111 (111)
.|.|.+.+.. . ....+.|.|..++..|
T Consensus 83 ~Y~C~v~~~~-~-~~~~~~L~V~~~~~~P 109 (180)
T 2dru_A 83 DYYMRMLHET-E-DQWKITMEVYEMVSKP 109 (180)
T ss_dssp EEEEEEESSS-E-EEEEEEEEEECCCCCC
T ss_pred EEEEEEEcCC-e-EEEEEEEEEECCCCCC
Confidence 9999987754 3 3667788887765544
No 375
>1i1r_A GP130, interleukin-6 receptor beta chain; cytokine/receptor complex, GP130; 2.40A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1p9m_A
Probab=98.94 E-value=5e-08 Score=56.61 Aligned_cols=90 Identities=13% Similarity=0.153 Sum_probs=61.6
Q ss_pred cCcceeeecCCcEEEEEEEecc-------CCCeEEEEECCeeccCCCCceEEEeCCCCCeEEEEccCCCCCCCeEEEEEe
Q psy2442 16 RPRNQAVKAGGITSFYCIARGD-------PIPVIQWRKNGKRVSGTQSRYMVQEFPPGGSLLRIEPVRHARDDAVYECVA 88 (111)
Q Consensus 16 ~~~~~~~~~g~~~~l~c~~~~~-------~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~g~y~c~~ 88 (111)
.+....+..|+.++|.|.+.+. +.+.+.|.++|..+.. .++..... ....|.+.++.. . .|.|.|.+
T Consensus 10 ~P~~~~v~~G~~v~l~C~~~~~~~~~~~~p~p~i~W~~~g~~i~~--~~~~~~~~--~~~~L~i~~~~~-~-~g~Y~C~a 83 (303)
T 1i1r_A 10 SPESPVVQLHSNFTAVCVLKEKCMDYFHVNANYIVWKTNHFTIPK--EQYTIINR--TASSVTFTDIAS-L-NIQLTCNI 83 (303)
T ss_dssp ESSSCEEETTCCEEEEEEECHHHHHHHTCCGGGEEEEETTEECCG--GGCEEEET--TEEEEEECSCCC-S-EEEEEEEE
T ss_pred ccCCceEeCCCCEEEEEEECCccccccCCChhheEEEECCEECCh--hheeeeCC--cEEEEEEcCcCC-C-ceEEEEec
Confidence 4455678999999999999863 6679999999998753 24433321 234589999987 6 59999999
Q ss_pred eeCCCceE-eeEEEEEEecCCCCC
Q psy2442 89 ENGVGDAV-SAEASLTVYEGEEKP 111 (111)
Q Consensus 89 ~~~~~~~~-~~~~~l~~~~~~~~p 111 (111)
.+..+... .....+.+..+|..|
T Consensus 84 ~~~g~~~~~~~~~~l~v~~~P~~P 107 (303)
T 1i1r_A 84 LTFGQLEQNVYGITIISGLPPEKP 107 (303)
T ss_dssp EETTTEEEEEEEEEEEEECCCCCC
T ss_pred ccCCCcceEEEEEEEeccCCCCCC
Confidence 87422211 223455566677665
No 376
>1nfd_E H57 FAB; complex (immunoreceptor-immunoglobulin), complex (immunorece immunoglobulin) complex; HET: NAG NDG; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=98.94 E-value=5.3e-10 Score=61.61 Aligned_cols=85 Identities=13% Similarity=0.261 Sum_probs=53.8
Q ss_pred CCCeeEEcCcceeeecCCcEEEEEEEecc-CC-CeEEEEECCeeccCCCCceEEEeCCC---CCeEEEEccCCCCCCCeE
Q psy2442 9 DPPEITLRPRNQAVKAGGITSFYCIARGD-PI-PVIQWRKNGKRVSGTQSRYMVQEFPP---GGSLLRIEPVRHARDDAV 83 (111)
Q Consensus 9 ~~p~~~~~~~~~~~~~g~~~~l~c~~~~~-~~-~~~~w~~~~~~~~~~~~~~~~~~~~~---~~~~l~~~~~~~~~d~g~ 83 (111)
.+|.+...+....+..|+.+.|.|.+.+. |. +.+.|+++|..+.............+ ....|.|..+.. .|.|.
T Consensus 112 ~~p~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~-~d~G~ 190 (212)
T 1nfd_E 112 SSPKVTVFPPSPEELRTNKATLVCLVNDFYPGSATVTWKANGATINDGVKTTKPSKQGQNYMTSSYLSLTADQW-KSHNR 190 (212)
T ss_dssp BCCEEECCCCCHHHHHTTEECCCEEEEEEBSSCCEEEEEETTEEECSSCBCCCCBCSSSCEEEEEBCCEEHHHH-HTCSC
T ss_pred CCCEEEeeCCchHhccCCceEEEEEEEeeECCccEEEEEECCeEcCCCeecCCceecCCCceEEEEEEEchhhc-CCCCe
Confidence 34555433333344578999999999886 44 68999999988753211100000000 012367778877 89999
Q ss_pred EEEEeeeCCCc
Q psy2442 84 YECVAENGVGD 94 (111)
Q Consensus 84 y~c~~~~~~~~ 94 (111)
|.|.+.|..+.
T Consensus 191 Y~C~a~n~~~~ 201 (212)
T 1nfd_E 191 VSCQVTHEGET 201 (212)
T ss_dssp EEEEEECTTTT
T ss_pred EEEEEEeCCce
Confidence 99999997654
No 377
>1b6u_A KIR2DL3, P58 killer cell inhibitory receptor; natural killer cell, HLA, major histocompatibility complex class I (MHC class I); 3.00A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=98.94 E-value=8e-09 Score=58.98 Aligned_cols=99 Identities=14% Similarity=0.204 Sum_probs=61.6
Q ss_pred eEEecC---CCeeEEcCcceeeecCCcEEEEEEEeccCCCeEEEEECCeeccCCCCceEEEeCCCCCeEEEEccCCCCCC
Q psy2442 4 KVRFLD---PPEITLRPRNQAVKAGGITSFYCIARGDPIPVIQWRKNGKRVSGTQSRYMVQEFPPGGSLLRIEPVRHARD 80 (111)
Q Consensus 4 ~l~v~~---~p~~~~~~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d 80 (111)
.|.|.. +|.+...+. ..+..|++++|.|.+.+. .+.+.|+++|..+........... ......|.|.++. |
T Consensus 98 ~L~V~~~~~~P~l~~~p~-~~V~~G~~vtL~C~~~~~-~~~~~w~k~g~~~~~~~~~~~~~~-~~~~~~l~I~~v~---D 171 (257)
T 1b6u_A 98 DIVITGLYEKPSLSAQPG-PTVLAGESVTLSCSSRSS-YDMYHLSREGEAHERRFSAGPKVN-GTFQADFPLGPAT---H 171 (257)
T ss_dssp EEEEECSSCCCEEECSSC-TTCBTTCEEEEEEECSSC-CSEEEEEETTSSCEECCBCBCCSS-SCCBEEEEEEECC---S
T ss_pred EEecccCCCCcceEccCC-CccCCCCEEEEEEeCCCC-CcEEEEEECCcccCcccccccccC-CceeEEEEecccc---c
Confidence 455543 355554444 367899999999998775 458999999876542211111000 0024558888774 9
Q ss_pred CeEEEEEeeeCCC----ceEeeEEEEEEecCC
Q psy2442 81 DAVYECVAENGVG----DAVSAEASLTVYEGE 108 (111)
Q Consensus 81 ~g~y~c~~~~~~~----~~~~~~~~l~~~~~~ 108 (111)
.|.|.|.+.+... ...+..+.|.|.++|
T Consensus 172 ~G~Y~C~a~~~~~p~~~s~~S~pl~L~V~g~p 203 (257)
T 1b6u_A 172 GGTYRCFGSFRDSPYEWSNSSDPLLVSVTGNP 203 (257)
T ss_dssp CEEEEEEEECSSCTTBBCCCCCCEEECCBCCC
T ss_pred CEEEEEEEEcCCCCcccccCCCCEEEEEeccC
Confidence 9999999986421 123556777776664
No 378
>1nfd_E H57 FAB; complex (immunoreceptor-immunoglobulin), complex (immunorece immunoglobulin) complex; HET: NAG NDG; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=98.94 E-value=4e-09 Score=58.08 Aligned_cols=72 Identities=21% Similarity=0.381 Sum_probs=52.0
Q ss_pred CcceeeecCCcEEEEEEEeccCCCeEEEEEC--Ceecc-----------CCCCceEEEeCCCCCeEEEEccCCCCCCCeE
Q psy2442 17 PRNQAVKAGGITSFYCIARGDPIPVIQWRKN--GKRVS-----------GTQSRYMVQEFPPGGSLLRIEPVRHARDDAV 83 (111)
Q Consensus 17 ~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~--~~~~~-----------~~~~~~~~~~~~~~~~~l~~~~~~~~~d~g~ 83 (111)
+..+.+..|+.++|.|...+.+.+.+.|++. +..+. ....++...... ....|.|.++.. .|+|.
T Consensus 6 p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~-~~~~L~I~~v~~-~D~G~ 83 (212)
T 1nfd_E 6 PSSASVTVGETVKITCSGDQLPKNFAYWFQQKSDKNILLLIYMDNKRPSGIPERFSGSTSG-TTATLTISGAQP-EDEAA 83 (212)
T ss_dssp CSEEEEETTSCCCEEEEETTGGGSCCEEEEECTTCCEEEEEBTTTBCCTTSCTTEEEEEET-TEEEEEETTCCG-GGCSE
T ss_pred CCeEEEeCCCcEEEEEecCCCCCCeEEEEEECCCCCcEEEEEeccccCCCccccEEEEeeC-CEEEEEECcCCc-ccCEE
Confidence 5567888999999999988877778999874 22220 012455444311 334599999998 99999
Q ss_pred EEEEeee
Q psy2442 84 YECVAEN 90 (111)
Q Consensus 84 y~c~~~~ 90 (111)
|.|.+.|
T Consensus 84 Y~C~~~n 90 (212)
T 1nfd_E 84 YYCLSSY 90 (212)
T ss_dssp EEEEEEE
T ss_pred EEEEEEc
Confidence 9999996
No 379
>1fo0_A Protein (BM3.3 T cell receptor alpha-chain); class I MHC, H-2KB, TCR-PMHC complex, immune system; 2.50A {Mus musculus} SCOP: b.1.1.1 PDB: 1nam_A*
Probab=98.94 E-value=6.9e-09 Score=52.33 Aligned_cols=76 Identities=20% Similarity=0.258 Sum_probs=52.2
Q ss_pred EEcCcceeeecCCcEEEEEEEecc-CCCeEEEEECC--ee---c---c-C-----CCCceEEEe-CCCCCeEEEEccCCC
Q psy2442 14 TLRPRNQAVKAGGITSFYCIARGD-PIPVIQWRKNG--KR---V---S-G-----TQSRYMVQE-FPPGGSLLRIEPVRH 77 (111)
Q Consensus 14 ~~~~~~~~~~~g~~~~l~c~~~~~-~~~~~~w~~~~--~~---~---~-~-----~~~~~~~~~-~~~~~~~l~~~~~~~ 77 (111)
.+.+..+.+.+|++++|.|...+. +...+.|++.. .. + . . ...|+.... .......|.|.+++.
T Consensus 4 ~q~p~~~~~~~G~~vtL~C~~~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~~~~ 83 (116)
T 1fo0_A 4 TQTQTSISVMEKTTVTMDCVYETQDSSYFLFWYKQTASGEIVFLIRQDSYKKENATVGHYSLNFQKPKSSIGLIITATQI 83 (116)
T ss_dssp ECCCCEEEEETTCCEEECCEECCCCSSCEEEEEEECTTCCEEEEEEEETTCCSCCEETTEEEEEEGGGTEEEEEECSCCG
T ss_pred CcCCCcEEEecCCcEEEEeEecCCCCCeEEEEEEeCCCCCeEEEEEEccCCcCcccCCcEEEEEeCCCCEEEEEECCCCh
Confidence 345666789999999999998776 55589998742 11 1 0 0 023555431 121334599999998
Q ss_pred CCCCeEEEEEeee
Q psy2442 78 ARDDAVYECVAEN 90 (111)
Q Consensus 78 ~~d~g~y~c~~~~ 90 (111)
+|+|.|.|.+.+
T Consensus 84 -~DsG~Y~C~~~~ 95 (116)
T 1fo0_A 84 -EDSAVYFCAMRG 95 (116)
T ss_dssp -GGCEEEEEEEEC
T ss_pred -hhCEEEEEEEEc
Confidence 999999999886
No 380
>1p4b_L Antibody variable light chain; FV antibody, antigen peptide binder, SCFV, picomolar binder, immune system; 2.35A {Mus musculus} SCOP: b.1.1.1 PDB: 1p4i_L
Probab=98.93 E-value=2.6e-08 Score=51.64 Aligned_cols=76 Identities=16% Similarity=0.284 Sum_probs=51.8
Q ss_pred eEEcCcceeeecCCcEEEEEEEeccC---CCeEEEEECCe--e---cc--------CCCCceEEEeCCCCCeEEEEccCC
Q psy2442 13 ITLRPRNQAVKAGGITSFYCIARGDP---IPVIQWRKNGK--R---VS--------GTQSRYMVQEFPPGGSLLRIEPVR 76 (111)
Q Consensus 13 ~~~~~~~~~~~~g~~~~l~c~~~~~~---~~~~~w~~~~~--~---~~--------~~~~~~~~~~~~~~~~~l~~~~~~ 76 (111)
+.+++ .+.+.+|++++|.|...... ...+.|++... . +. ....|+...... ....|.|.+++
T Consensus 9 v~q~~-~v~v~~G~~vtL~C~~~~~~~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~Rf~~~~~~-~~~sL~I~~v~ 86 (135)
T 1p4b_L 9 VTQES-ALTTSPGETVTLTCRSSTGAVTTSNYASWVQEKPDHLFTGLIGGTNNRAPGVPARFSGSLIG-DKAALTITGAQ 86 (135)
T ss_dssp EECCS-EEEECTTCEEEEEEEETTSSCCGGGCCEEEEEEGGGEEEEEEETTTEECTTCCTTEEEEEET-TEEEEEEESCC
T ss_pred EEECC-cEEEcCCCCEEEEEEecCCCcCCCCEEEEEEECCCCCCEEEEEeCCccCCCCCCCEEEEcCC-CEEEEEECCCC
Confidence 33444 37889999999999987654 45789987421 1 10 112455554322 33459999999
Q ss_pred CCCCCeEEEEEeeeC
Q psy2442 77 HARDDAVYECVAENG 91 (111)
Q Consensus 77 ~~~d~g~y~c~~~~~ 91 (111)
. +|+|.|.|.+.+.
T Consensus 87 ~-~DsG~Y~C~~~~~ 100 (135)
T 1p4b_L 87 T-EDEAIYFCALWYS 100 (135)
T ss_dssp G-GGCEEEEEEEECS
T ss_pred h-hHCEEEEEEEecC
Confidence 8 9999999998764
No 381
>1nkr_A P58-CL42 KIR; inhibitory receptor, natural killer cells, immunological receptors, immunoglobulin fold; 1.70A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1m4k_A 1efx_D 2dli_A 2dl2_A 3h8n_A
Probab=98.93 E-value=1.7e-08 Score=55.33 Aligned_cols=82 Identities=13% Similarity=0.258 Sum_probs=52.7
Q ss_pred eEEecC---CCeeEEcCcceeeecCCcEEEEEEEeccCCCeEEEEECCeeccCCCCceEEEeCCCCCeEEEEccCCCCCC
Q psy2442 4 KVRFLD---PPEITLRPRNQAVKAGGITSFYCIARGDPIPVIQWRKNGKRVSGTQSRYMVQEFPPGGSLLRIEPVRHARD 80 (111)
Q Consensus 4 ~l~v~~---~p~~~~~~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d 80 (111)
.|.|.. +|.+...+. ..+..|+.++|.|.+.+ +.+.+.|++++..+........... ......|.|.++. |
T Consensus 99 ~l~V~~~~~~p~i~~~p~-~~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~~~~~~~~~-~~~~~~L~i~~v~---d 172 (201)
T 1nkr_A 99 DIVIIGLYEKPSLSAQPG-PTVLAGENVTLSCSSRS-SYDMYHLSREGEAHERRLPAGPKVN-GTFQADFPLGPAT---H 172 (201)
T ss_dssp EEEEECSSCCCEEEEESC-SEECTTCEEEEEEEESS-CCSEEEEEETTCSSCEEEECEEEET-TEEEEEEEEEECC---S
T ss_pred EEEeeccCCCCceecCCC-CccCCCCeEEEEEeCCC-CCceEEEEECCcccCcccccccccC-CceEEEEEeCCcC---C
Confidence 455543 356655454 36789999999999876 4568999999876542111111110 0013447887774 9
Q ss_pred CeEEEEEeeeC
Q psy2442 81 DAVYECVAENG 91 (111)
Q Consensus 81 ~g~y~c~~~~~ 91 (111)
+|.|.|.+.+.
T Consensus 173 ~G~Y~C~a~~~ 183 (201)
T 1nkr_A 173 GGTYRCFGSFH 183 (201)
T ss_dssp CEEEEEEEEET
T ss_pred CeeEEEEEEcC
Confidence 99999998864
No 382
>3sob_L Antibody light chain; beta propeller, protein binding-immune system complex; 1.90A {Homo sapiens} PDB: 1pkq_A 3u1s_L*
Probab=98.93 E-value=1.4e-08 Score=56.71 Aligned_cols=85 Identities=19% Similarity=0.318 Sum_probs=52.8
Q ss_pred CCCeeEEcCcceeeecCCcEEEEEEEecc-C-CCeEEEEECCeeccCCC-CceEEEeCCCC----CeEEEEccCCCCCCC
Q psy2442 9 DPPEITLRPRNQAVKAGGITSFYCIARGD-P-IPVIQWRKNGKRVSGTQ-SRYMVQEFPPG----GSLLRIEPVRHARDD 81 (111)
Q Consensus 9 ~~p~~~~~~~~~~~~~g~~~~l~c~~~~~-~-~~~~~w~~~~~~~~~~~-~~~~~~~~~~~----~~~l~~~~~~~~~d~ 81 (111)
.+|.+...+.......|+.++|.|.+.+. | .+.+.|++++..+.... ........... ...|.+..... .|.
T Consensus 134 ~~p~v~~~~~~~~~~~g~~v~l~C~~~~~~p~~~~v~W~k~g~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~-~d~ 212 (237)
T 3sob_L 134 AAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADY-EKH 212 (237)
T ss_dssp BCCEEEEECCCHHHHHHTEEEEEEEEEEEBSSCCEEEEEETTEECCSSEEEEECCCCTTTCCEEEEEEEEEEHHHH-TTC
T ss_pred CCCceEEeCCChhhccCCceEEEEEEcccCCCceEEEEEECCCCCCCceeecccccccCCCcEEEEEEEEEcHHHc-cCC
Confidence 34555443333334468889999999884 4 47999999998875320 00000000001 13366777776 889
Q ss_pred eEEEEEeeeCCCc
Q psy2442 82 AVYECVAENGVGD 94 (111)
Q Consensus 82 g~y~c~~~~~~~~ 94 (111)
|.|.|.+.|....
T Consensus 213 g~Y~C~a~n~~~~ 225 (237)
T 3sob_L 213 KVYACEVTHQGLS 225 (237)
T ss_dssp CEEEEEEECTTCS
T ss_pred CcEEEEEeeCCCC
Confidence 9999999997643
No 383
>2c1o_A IGK-C protein; FAB fragment, enantioselective, finrozole, immune system, antibody, ENA11His antibody, immunoglobulin domain; 2.75A {Mus musculus}
Probab=98.93 E-value=9.1e-09 Score=58.15 Aligned_cols=90 Identities=16% Similarity=0.256 Sum_probs=55.5
Q ss_pred eEEecC---CCeeEEcCcceeeecCCcEEEEEEEeccCC--CeEEEEECCeeccCC-CCceEEEeCCC----CCeEEEEc
Q psy2442 4 KVRFLD---PPEITLRPRNQAVKAGGITSFYCIARGDPI--PVIQWRKNGKRVSGT-QSRYMVQEFPP----GGSLLRIE 73 (111)
Q Consensus 4 ~l~v~~---~p~~~~~~~~~~~~~g~~~~l~c~~~~~~~--~~~~w~~~~~~~~~~-~~~~~~~~~~~----~~~~l~~~ 73 (111)
+|.|.. +|.+...+.......|+.+.|.|.+.+.++ +.+.|+++|..+... ..+........ ....|.|.
T Consensus 145 ~l~V~~~~~~P~v~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~g~~~~~~~L~i~ 224 (254)
T 2c1o_A 145 KLELKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLT 224 (254)
T ss_dssp EEEECCCCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCCEEEEEESSSEECTTEEEEECCCCTTTCCEEEEEEEEEE
T ss_pred EEEECCCCCCCeeEeecCChhhccCCcEEEEEEEecccCCCcEEEEEECCCcccCcceeccccccCCCCcEEEEEEEEec
Confidence 455543 455554333223346789999999988443 359999998876532 00000000000 12348888
Q ss_pred cCCCCCCCeEEEEEeeeCCCc
Q psy2442 74 PVRHARDDAVYECVAENGVGD 94 (111)
Q Consensus 74 ~~~~~~d~g~y~c~~~~~~~~ 94 (111)
.+.. .|.|.|.|.+.|....
T Consensus 225 ~~~~-~d~G~Y~C~a~n~~~~ 244 (254)
T 2c1o_A 225 KDEY-ERHNSYTCEATHKTST 244 (254)
T ss_dssp HHHH-HTCCEEEEEEECTTCS
T ss_pred cccc-cCCCeEEEEEEcCCCC
Confidence 8887 8999999999997643
No 384
>1fo0_B Protein (BM3.3 T cell receptor beta-chain); class I MHC, H-2KB, TCR-PMHC complex, immune system; 2.50A {Mus musculus} SCOP: b.1.1.1 PDB: 1nam_B* 2ol3_B* 1kb5_B 1kj2_B*
Probab=98.92 E-value=2.9e-08 Score=49.76 Aligned_cols=76 Identities=17% Similarity=0.412 Sum_probs=52.3
Q ss_pred eEEcCcceeeecCCcEEEEEEEeccCCCeEEEEECC--ee---c-c--CC---------CCceEEEeCCCCCeEEEEccC
Q psy2442 13 ITLRPRNQAVKAGGITSFYCIARGDPIPVIQWRKNG--KR---V-S--GT---------QSRYMVQEFPPGGSLLRIEPV 75 (111)
Q Consensus 13 ~~~~~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~~--~~---~-~--~~---------~~~~~~~~~~~~~~~l~~~~~ 75 (111)
+.+.+..+.+.+|++++|.|.........+.|++.. .. + . .. ..|+...... .. .|.|.++
T Consensus 4 v~q~p~~~~v~~G~~vtL~C~~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~Rf~~~~~~-~~-~L~I~~~ 81 (112)
T 1fo0_B 4 LEQNPRWRLVPRGQAVNLRCILKNSQYPWMSWYQQDLQKQLQWLFTLRSPGDKEVKSLPGADYLATRVT-DT-ELRLQVA 81 (112)
T ss_dssp EEEECSEEECCTTCCEEEEEEESCTTCCEEEEEEECTTCCEEEEEECCSTTCEEEEEETTEEEEEEEEE-TT-EEEEEEE
T ss_pred EEeCCCeEEEecCCcEEEEEEeCCCCCceEEEEEECCCCCCEEEEEEeCCCceecCccccCCEEEEcCC-CC-eEEEcCC
Confidence 345566678899999999999866566789999742 11 1 0 10 0344333222 22 6999999
Q ss_pred CCCCCCeEEEEEeeeC
Q psy2442 76 RHARDDAVYECVAENG 91 (111)
Q Consensus 76 ~~~~d~g~y~c~~~~~ 91 (111)
+. +|+|.|.|.+.+.
T Consensus 82 ~~-~Dsg~Y~C~~~~~ 96 (112)
T 1fo0_B 82 NM-SQGRTLYCTCSAD 96 (112)
T ss_dssp SC-CSCEEEEEEEESS
T ss_pred CH-hHCEEEEEEEEcC
Confidence 98 9999999998764
No 385
>2z35_A T-cell receptor alpha-chain; immune receptor, immune system; 2.20A {Mus musculus} PDB: 2pxy_A 2z31_A 1ac6_A
Probab=98.92 E-value=1.4e-08 Score=50.90 Aligned_cols=75 Identities=16% Similarity=0.215 Sum_probs=51.9
Q ss_pred EEcCcceeeecCCcEEEEEEEeccCCCeEEEEECCe--e---c-c--C-----CCCceEEEe-CCCCCeEEEEccCCCCC
Q psy2442 14 TLRPRNQAVKAGGITSFYCIARGDPIPVIQWRKNGK--R---V-S--G-----TQSRYMVQE-FPPGGSLLRIEPVRHAR 79 (111)
Q Consensus 14 ~~~~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~~~--~---~-~--~-----~~~~~~~~~-~~~~~~~l~~~~~~~~~ 79 (111)
.+.+..+.+.+|++++|.|...+.+...+.|++... . + . . ...|+.... .......|.|.+++. +
T Consensus 4 ~q~p~~~~~~~G~~v~L~C~~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~~~~-~ 82 (112)
T 2z35_A 4 TQTGGQVALSEEDFLTIHCNYSASGYPALFWYVQYPGEGPQFLFRASRDKEKGSSRGFEATYNKEATSFHLQKASVQE-S 82 (112)
T ss_dssp ECSCSEEEEETTCCEEECCEEECSSCCEEEEEEECTTSCCEEEEEECSTTCEEEETTEEEECBTTTTBCCEEESSCCS-T
T ss_pred EeCCCcEEEcCCCCEEEEEEECCCCCCeEEEEEECCCCCcEEeEEEecccCCccCCCEEEEEcCCCCEEEEEECCCCh-h
Confidence 345666788999999999998776667899997531 1 1 0 0 013444431 122234599999998 9
Q ss_pred CCeEEEEEee
Q psy2442 80 DDAVYECVAE 89 (111)
Q Consensus 80 d~g~y~c~~~ 89 (111)
|+|.|.|.+.
T Consensus 83 DsG~Y~C~~~ 92 (112)
T 2z35_A 83 DSAVYYCALS 92 (112)
T ss_dssp TCSEEEEEEE
T ss_pred hCEEEEEEEE
Confidence 9999999987
No 386
>3t0v_A Immunoglobulin variable lambda domain; immunoglobulin fold, fluorogen activation, dimethylindole RE binding protein; HET: 1PE PE3; 1.45A {Homo sapiens} PDB: 3t0w_A* 3t0x_A* 3lrg_A 3lrh_A 2rhe_A
Probab=98.92 E-value=1.2e-07 Score=48.34 Aligned_cols=79 Identities=18% Similarity=0.322 Sum_probs=53.8
Q ss_pred CeeEEcCcceeeecCCcEEEEEEEeccC--CCeEEEEECC--ee---c-c-------CCCCceEEEeCCCCCeEEEEccC
Q psy2442 11 PEITLRPRNQAVKAGGITSFYCIARGDP--IPVIQWRKNG--KR---V-S-------GTQSRYMVQEFPPGGSLLRIEPV 75 (111)
Q Consensus 11 p~~~~~~~~~~~~~g~~~~l~c~~~~~~--~~~~~w~~~~--~~---~-~-------~~~~~~~~~~~~~~~~~l~~~~~ 75 (111)
|.+.+ +..+.+.+|++++|.|...+.. ...+.|++.. .. + . ....|+...... ....|.|.++
T Consensus 2 p~v~Q-p~~v~v~~G~~vtL~C~~s~~~~~~~~v~Wyrq~~g~~~~~li~~~~~~~~~~~~Rfs~~~~~-~~~sL~I~~l 79 (123)
T 3t0v_A 2 PVLTQ-SPSVSGTPGQKVTIFCSGSSSNVEDNSVYWYQQFPGTTPKVLIYNDDRRSSGVPDRFSGSKSG-TSASLAISGL 79 (123)
T ss_dssp CSBEE-CCCEEECTTCCEEEEEECCTTTTTTSCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEET-TEEEEEECSC
T ss_pred CccCc-cCeEEEcCCCCEEEEEecCCCccCCCeEEEEEECCCCCCEEEEEECCcCCCCCcCCEEEEccC-CEEEEEECCC
Confidence 44555 4467899999999999987654 3579999742 11 1 0 012455544311 3455999999
Q ss_pred CCCCCCeEEEEEeeeCC
Q psy2442 76 RHARDDAVYECVAENGV 92 (111)
Q Consensus 76 ~~~~d~g~y~c~~~~~~ 92 (111)
+. +|+|.|.|.+.+..
T Consensus 80 ~~-~DsG~Y~C~~~~~~ 95 (123)
T 3t0v_A 80 RS-EDEADYYCLSWDDS 95 (123)
T ss_dssp CG-GGCEEEEEEEEETT
T ss_pred CH-HHCEEEEEEEEcCC
Confidence 98 99999999988753
No 387
>1tvd_A T cell receptor, ES204 V delta; immunoreceptor, TCR, delta chain, variable domain; 1.90A {Homo sapiens} SCOP: b.1.1.1
Probab=98.92 E-value=9.3e-09 Score=51.81 Aligned_cols=77 Identities=27% Similarity=0.373 Sum_probs=52.5
Q ss_pred EEcCcceeeecCCcEEEEEEEecc-CCCeEEEEECC--ee---cc---C--------CCCceEEEeC-CCCCeEEEEccC
Q psy2442 14 TLRPRNQAVKAGGITSFYCIARGD-PIPVIQWRKNG--KR---VS---G--------TQSRYMVQEF-PPGGSLLRIEPV 75 (111)
Q Consensus 14 ~~~~~~~~~~~g~~~~l~c~~~~~-~~~~~~w~~~~--~~---~~---~--------~~~~~~~~~~-~~~~~~l~~~~~ 75 (111)
.+.+..+.+.+|++++|.|..... ....+.|++.. .. +. . ...|+..... ......|.|.++
T Consensus 4 ~q~p~~~~~~~G~~vtL~C~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~~ 83 (116)
T 1tvd_A 4 TQSSPDQTVASGSEVVLLCTYDTVYSNPDLFWYRIRPDYSFQFVFYGDDSRSEGADFTQGRFSVKHILTQKAFHLVISPV 83 (116)
T ss_dssp ECCSCCEEEETTCCEEECCEEECCSSSCCEEEEEECTTSCEEEEEEECSSCEEECGGGTTTEEEEEEGGGTEEEEEESSC
T ss_pred ecCCCcEEEecCCeEEEEeEeEcCCCCcEEEEEEeCCCCCcEEEEEECCcccccCcccCCCEEEEEecCCCEEEEEEccC
Confidence 445666789999999999998654 45579998753 11 10 0 0245554321 113345999999
Q ss_pred CCCCCCeEEEEEeeeC
Q psy2442 76 RHARDDAVYECVAENG 91 (111)
Q Consensus 76 ~~~~d~g~y~c~~~~~ 91 (111)
+. +|+|.|.|.+.+.
T Consensus 84 ~~-~DsG~Y~C~~~~~ 98 (116)
T 1tvd_A 84 RT-EDSATYYCAFTLP 98 (116)
T ss_dssp CG-GGCEEEEEEEECT
T ss_pred Ch-HHCEEEEEEEeCC
Confidence 98 9999999999873
No 388
>2i24_N NEW antigen receptor PBLA8; immunoglobulin fold, immune system; 1.35A {Ginglymostoma cirratum} PDB: 2i25_N 2i27_N 2i26_N
Probab=98.92 E-value=2.2e-08 Score=50.99 Aligned_cols=77 Identities=19% Similarity=0.389 Sum_probs=52.7
Q ss_pred eEEcCcceeeecCCcEEEEEEEeccC--CCeEEEEECC--ee---ccCCCCceEEEe-CCCCCeEEEEccCCCCCCCeEE
Q psy2442 13 ITLRPRNQAVKAGGITSFYCIARGDP--IPVIQWRKNG--KR---VSGTQSRYMVQE-FPPGGSLLRIEPVRHARDDAVY 84 (111)
Q Consensus 13 ~~~~~~~~~~~~g~~~~l~c~~~~~~--~~~~~w~~~~--~~---~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~d~g~y 84 (111)
+.+.+..+.+.+|++++|.|...+.. ...+.|++.. .. +.....++.... .......|.|.+++. +|+|.|
T Consensus 3 v~Q~p~~v~v~~G~~vtL~C~~s~~~~~~~~v~Wyrq~~g~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~~~~-~DsG~Y 81 (121)
T 2i24_N 3 VDQTPQRITKETGESLTINCVVRDSRCVLSTGYWYRKPPGSRNEESISDGGRYVETVNRGSKSFSLRINDLTV-KDSGTY 81 (121)
T ss_dssp EEEECSEEEEETTCCEEEEEEECSCCCCEEEEEEEEECTTCSCCEEECSBTTEEEEEETTTTEEEEEECSCCG-GGCEEE
T ss_pred cEECCcEEEEecCCcEEEEeEccCCCCCCCEEEEEEeCCCCCceeeEecCCCeEEEecCCCCEEEEEECCCCh-hhCEEE
Confidence 34556678899999999999987653 3478999853 21 111124554432 122345599999998 999999
Q ss_pred EEEeee
Q psy2442 85 ECVAEN 90 (111)
Q Consensus 85 ~c~~~~ 90 (111)
.|.+..
T Consensus 82 ~C~~~~ 87 (121)
T 2i24_N 82 RCKPES 87 (121)
T ss_dssp EEEEEE
T ss_pred EEEEec
Confidence 999864
No 389
>3r06_A Anti-mouse CD3epsilon antibody 2C11 FAB light CHA; anti-CD3epsilon, T-cell receptor, signalling, IMMU; 2.50A {Cricetulus migratorius} PDB: 3r08_L 3ld8_B 3ldb_B*
Probab=98.91 E-value=1.8e-08 Score=55.42 Aligned_cols=89 Identities=13% Similarity=0.269 Sum_probs=55.6
Q ss_pred eEEe---cCCCeeEEcCcceeeecCCcEEEEEEEeccCCC--eEEEEECCeeccCCC-CceEEEeCCCC----CeEEEEc
Q psy2442 4 KVRF---LDPPEITLRPRNQAVKAGGITSFYCIARGDPIP--VIQWRKNGKRVSGTQ-SRYMVQEFPPG----GSLLRIE 73 (111)
Q Consensus 4 ~l~v---~~~p~~~~~~~~~~~~~g~~~~l~c~~~~~~~~--~~~w~~~~~~~~~~~-~~~~~~~~~~~----~~~l~~~ 73 (111)
.|.| ..+|.+...+.......|+.+.|.|.+.+.+++ .+.|+++|..+.... ........... ...|.+.
T Consensus 103 ~l~V~~~~~~p~v~~~~~~~~~~~~~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~g~~~~~s~l~i~ 182 (213)
T 3r06_A 103 KLEIKRADAKPTVSIFPPSSEQLGTGSATLVCFVNNFYPKDINVKWKVDGSEKRDGVLQSVTDQDSKDSTYSLSSTLSLT 182 (213)
T ss_dssp EEEECCCCBCCEEEEECCCHHHHTTTEEEEEEEEEEEBSSCEEEEEEETTEEECTTEEEEECCCCTTTCCEEEEEEEEEE
T ss_pred eEEEeccCCCceeeeeCCCceecCCCCcEEEEEEeeecCCceEEEEEECCcccCCceEeccCceeCCCCcEEEEEEEEeC
Confidence 4556 456666554444455578889999999886543 799999998875320 00000000001 1236666
Q ss_pred cCCCCCCCeEEEEEeeeCCC
Q psy2442 74 PVRHARDDAVYECVAENGVG 93 (111)
Q Consensus 74 ~~~~~~d~g~y~c~~~~~~~ 93 (111)
.... .|.|.|.|.+.|...
T Consensus 183 ~~~~-~d~g~YtC~v~n~~~ 201 (213)
T 3r06_A 183 KADY-ERHNLYTCEVTHKTS 201 (213)
T ss_dssp HHHH-HTCCEEEEEEEETTC
T ss_pred HHHh-ccCCeEEEEEEeccc
Confidence 6665 789999999999753
No 390
>1svz_A Immunoglobulin;, single-chain FV fragment 1696; antibody-antigen complex, HIV inhibiting antibody; 1.89A {Mus musculus} PDB: 1jp5_A
Probab=98.91 E-value=1.4e-08 Score=57.18 Aligned_cols=72 Identities=19% Similarity=0.349 Sum_probs=49.7
Q ss_pred ceeeecCCcEEEEEEEeccC--CCeEEEEECC--eec------cC----------CCCceEEEeC-CCCCeEEEEccCCC
Q psy2442 19 NQAVKAGGITSFYCIARGDP--IPVIQWRKNG--KRV------SG----------TQSRYMVQEF-PPGGSLLRIEPVRH 77 (111)
Q Consensus 19 ~~~~~~g~~~~l~c~~~~~~--~~~~~w~~~~--~~~------~~----------~~~~~~~~~~-~~~~~~l~~~~~~~ 77 (111)
...+..|++++|.|.+.+.+ .+.+.|++.+ ..+ .. ...++..... ......|.|.++..
T Consensus 136 ~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~ 215 (247)
T 1svz_A 136 PELKKPGETVKISCKATNYAFTDYSMHWVKQAPGGDLKYVGWINTETDEPTFADDFKGRFAFSLDTSTSTAFLQINNLKN 215 (247)
T ss_dssp CEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTCCEEEEEEECTTTCCEEECGGGSSSEEEEEEGGGTEEEEEECSCCG
T ss_pred ceeecCCCcEEEEEEEcCcccCCcEEEEEEeCCCCCcEEEEEEEcCCCccccCccccCcEEEEEecCCCEEEEEECCCCh
Confidence 34688999999999998864 4689999853 111 00 0234444321 11234699999998
Q ss_pred CCCCeEEEEEeeeC
Q psy2442 78 ARDDAVYECVAENG 91 (111)
Q Consensus 78 ~~d~g~y~c~~~~~ 91 (111)
.|+|.|.|.+.|.
T Consensus 216 -~DsG~Y~C~a~n~ 228 (247)
T 1svz_A 216 -EDTATYFCVRDRH 228 (247)
T ss_dssp -GGCEEEEEEEEEG
T ss_pred -hHCEEEEEEEecc
Confidence 9999999999884
No 391
>2oi9_C V beta, T cell receptor beta chain; TCR, MHC, immune system; 2.35A {Mus musculus} PDB: 2e7l_C
Probab=98.91 E-value=8.2e-08 Score=48.80 Aligned_cols=77 Identities=19% Similarity=0.390 Sum_probs=51.7
Q ss_pred eEEcCcceeeecCCcEEEEEEEeccCCCeEEEEECC--ee---c---cC--------CCCceEEEeCCCCCeEEEEccCC
Q psy2442 13 ITLRPRNQAVKAGGITSFYCIARGDPIPVIQWRKNG--KR---V---SG--------TQSRYMVQEFPPGGSLLRIEPVR 76 (111)
Q Consensus 13 ~~~~~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~~--~~---~---~~--------~~~~~~~~~~~~~~~~l~~~~~~ 76 (111)
+.+.+..+.+..|++++|.|... .....+.|++.. .. + .. ...|+...........|.|.+++
T Consensus 4 v~q~p~~v~v~~G~~vtL~C~~~-~~~~~v~W~rq~~g~~~~~l~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~I~~v~ 82 (121)
T 2oi9_C 4 VTQSPRNKVAVTGEKVTLSCNQT-NNHNNMYWYRQDTGHELRLIYYSYGAGSTEKGDIPDGYKASRPSQENFSLTLESAT 82 (121)
T ss_dssp EEEECSEEEEETTCCEEEEEEES-SCCSEEEEEEESSSSCCEEEEEESSTTCCEECSSCTTEEEECCSSSEEEEEESSCC
T ss_pred eEeCCCeEEecCCCcEEEEEEec-CCCCeEEEEEECCCCCcEEEEEECCCceeeCCccCCCeEEEcCCCCEEEEEECCCC
Confidence 44566778899999999999953 344589998742 11 1 00 02355544312123459999999
Q ss_pred CCCCCeEEEEEeeeC
Q psy2442 77 HARDDAVYECVAENG 91 (111)
Q Consensus 77 ~~~d~g~y~c~~~~~ 91 (111)
. +|+|.|.|.+.+.
T Consensus 83 ~-~DsG~Y~C~~~~~ 96 (121)
T 2oi9_C 83 P-SQTSVYFCASGGG 96 (121)
T ss_dssp G-GGCEEEEEEEESS
T ss_pred H-HHCEEEEEEEccC
Confidence 8 9999999998764
No 392
>1q9r_B S25-2 FAB (IGG1K) heavy chain; antigen-binding fragment, anti-carbohydrate, anti-LPS, antibody, immunoglobulin, KDO, complex, immune system; HET: KDA KDO; 1.45A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q9l_B 1q9k_B* 1q9q_B* 1q9v_B* 2r1w_B* 2r1x_B* 2r1y_B* 2r2b_B* 2r2e_B* 2r2h_B* 3bpc_B* 3sy0_B* 3t4y_B* 3t65_B* 2r23_B* 1q9t_B* 3t77_B* 3okl_B* 3okk_B* 3okm_B ...
Probab=98.91 E-value=4.9e-09 Score=58.19 Aligned_cols=87 Identities=13% Similarity=0.255 Sum_probs=54.9
Q ss_pred eEEecC----CCeeEEcCcceeeecCCcEEEEEEEecc-CCC-eEEEEECCeeccCCCCceEEEeCCC---CCeEEEEcc
Q psy2442 4 KVRFLD----PPEITLRPRNQAVKAGGITSFYCIARGD-PIP-VIQWRKNGKRVSGTQSRYMVQEFPP---GGSLLRIEP 74 (111)
Q Consensus 4 ~l~v~~----~p~~~~~~~~~~~~~g~~~~l~c~~~~~-~~~-~~~w~~~~~~~~~~~~~~~~~~~~~---~~~~l~~~~ 74 (111)
+|.|.. +|.+...+....+..|+.++|.|.+.+. |.+ .+.|++++..+... .......++ ....|.+..
T Consensus 117 ~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~g~~~~~~--~~~~~~~~~~~~~~s~L~i~~ 194 (222)
T 1q9r_B 117 LVTVSAAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVH--TFPAVLQSDLYTLSSSVTVPS 194 (222)
T ss_dssp EEEECSSCCBCCEEEEECCCSCCCCSSEEEEEEEEEEEBSSCCEEEEGGGTBCTTEE--EEEEEEETTEEEEEEEEEEET
T ss_pred EEEeccCCCCCCeEEEccccccccCCCcEEEEEEEccEECCCCEEEEecCCeEcceE--eccccccCCcEEEEEEEEECc
Confidence 555653 3444433222235679999999999885 777 99999987754311 111100010 112477878
Q ss_pred CCCCCCCeEEEEEeeeCCCc
Q psy2442 75 VRHARDDAVYECVAENGVGD 94 (111)
Q Consensus 75 ~~~~~d~g~y~c~~~~~~~~ 94 (111)
... .| |.|.|.+.|..+.
T Consensus 195 ~~~-~d-g~y~C~a~n~~~~ 212 (222)
T 1q9r_B 195 STW-PS-ETVTCNVAHPASS 212 (222)
T ss_dssp TTT-TT-SCCEEEEEEGGGT
T ss_pred hhc-CC-CeEEEEEEccCCC
Confidence 776 78 9999999998765
No 393
>2aw2_A B and T lymphocyte attenuator; IGI domain, IGG domain, TNFRSF, protein-protein complex, IMM system; HET: NAG FUL; 2.80A {Homo sapiens} SCOP: b.1.1.1
Probab=98.91 E-value=9.5e-08 Score=46.94 Aligned_cols=82 Identities=22% Similarity=0.279 Sum_probs=57.0
Q ss_pred eeeecCCcEEEEEEEec-cCCCeEEEEECC----eeccCCCCceEEEeCCCCC--eEEEEccCCCCCCCeEEEEEeeeCC
Q psy2442 20 QAVKAGGITSFYCIARG-DPIPVIQWRKNG----KRVSGTQSRYMVQEFPPGG--SLLRIEPVRHARDDAVYECVAENGV 92 (111)
Q Consensus 20 ~~~~~g~~~~l~c~~~~-~~~~~~~w~~~~----~~~~~~~~~~~~~~~~~~~--~~l~~~~~~~~~d~g~y~c~~~~~~ 92 (111)
..+..|+.+.|.|.+.+ .+.|.+.|-+-+ ..+. .+.+.....+.. -.|.+.++.. +|+|.|.|.+....
T Consensus 21 hsv~~G~~f~leCpv~yc~~rP~VtWcKln~~~c~~L~---~~~q~w~E~~N~s~fvLhf~~V~~-sDsGsYRCsAn~~s 96 (120)
T 2aw2_A 21 HSILAGDPFELECPVKYCANRPHVTWCKLNGTTCVKLE---DRQTSWKEEKNISFFILHFEPVLP-NDNGSYRCSANFQS 96 (120)
T ss_dssp EEEETTSCEEEEEEEECSSSCCEEEEEEECSSCEEECC---SSCEEEEECSSCEEEEEEESSCCG-GGCEEEEEEEEETT
T ss_pred ceEecCCeEEEEccEEeccCCCceEEEecCCceEEECc---cccccceecCCeeEEEEEEeeeeE-cCCcceEEEeeCCC
Confidence 46788999999999987 688899998754 2332 122211111111 1488889998 99999999999988
Q ss_pred CceEeeEEEEEEe
Q psy2442 93 GDAVSAEASLTVY 105 (111)
Q Consensus 93 ~~~~~~~~~l~~~ 105 (111)
|...+....+.|.
T Consensus 97 g~ieSHsvtI~Vt 109 (120)
T 2aw2_A 97 NLIESHSTTLYVT 109 (120)
T ss_dssp EEEECCCEEEEEE
T ss_pred CcEEeeEEEEEEE
Confidence 8655556666554
No 394
>1ncn_A T lymphocyte activation antigen CD86; IG V, beta strands, immune system; 2.70A {Homo sapiens} SCOP: b.1.1.1 PDB: 1i85_A
Probab=98.91 E-value=4e-08 Score=48.91 Aligned_cols=71 Identities=13% Similarity=0.236 Sum_probs=48.7
Q ss_pred eeeecCCcEEEEEEEeccCCC-----eEEEEECCee-c---cC-----------CCCceEEEeCCCCCeEEEEccCCCCC
Q psy2442 20 QAVKAGGITSFYCIARGDPIP-----VIQWRKNGKR-V---SG-----------TQSRYMVQEFPPGGSLLRIEPVRHAR 79 (111)
Q Consensus 20 ~~~~~g~~~~l~c~~~~~~~~-----~~~w~~~~~~-~---~~-----------~~~~~~~~~~~~~~~~l~~~~~~~~~ 79 (111)
+.+..|++++|.|...+.+.+ .+.|++.+.. + .. -..+..... ....|.|.+++. +
T Consensus 4 v~~~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~---~~~sL~I~~v~~-~ 79 (110)
T 1ncn_A 4 IQAYFNETADLPCQFANSQNQSLSELVVFWQDQENLVLNEVYLGKEKFDSVHSKYMGRTSFDS---DSWTLRLHNLQI-K 79 (110)
T ss_dssp EEEETTSCEEEECCCCCTTCCCGGGEEEEEEETTCCEEEEEETTEECCSSBCTTTTTSEEEET---TTTEEEECSCCG-G
T ss_pred EEEEeCCCEEEEeEeCCCCcCCCccEEEEEEeCCCccEEEEECCcccccccCcccCCcEEEEC---CCEEEEEcCCCh-H
Confidence 567889999999998754433 3899987531 0 00 012333322 234599999998 9
Q ss_pred CCeEEEEEeeeCCCc
Q psy2442 80 DDAVYECVAENGVGD 94 (111)
Q Consensus 80 d~g~y~c~~~~~~~~ 94 (111)
|+|.|.|.+.+..+.
T Consensus 80 D~G~Y~C~v~~~~~~ 94 (110)
T 1ncn_A 80 DKGLYQCIIHHKKPT 94 (110)
T ss_dssp GCEEEEEEEEEECSS
T ss_pred HCEEEEEEEEcCCCC
Confidence 999999999886554
No 395
>1moe_A Anti-CEA MAB T84.66; anti carcinoembryonic antigen, diabody, dimer, SCFV, variable domain, immune system; 2.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=98.91 E-value=2.9e-08 Score=55.63 Aligned_cols=87 Identities=17% Similarity=0.273 Sum_probs=57.4
Q ss_pred eeEEecCCC------eeEEcCcceeeecCCcEEEEEEEeccC--CCeEEEEEC--Ceecc----------------CCCC
Q psy2442 3 RKVRFLDPP------EITLRPRNQAVKAGGITSFYCIARGDP--IPVIQWRKN--GKRVS----------------GTQS 56 (111)
Q Consensus 3 ~~l~v~~~p------~~~~~~~~~~~~~g~~~~l~c~~~~~~--~~~~~w~~~--~~~~~----------------~~~~ 56 (111)
+.|.|..++ .....+....+..|+.++|.|.+.+.+ .+.+.|++. +..+. ....
T Consensus 106 ~~l~V~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 185 (240)
T 1moe_A 106 TKLEIKGGGSGGGGEVQLQQSGAELVEPGASVKLSCTASGFNIKDTYMHWVKQRPEQGLEWIGRIDPANGNSKYVPKFQG 185 (240)
T ss_dssp EEEEECCCSCCCCCCCEEEECCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECGGGTT
T ss_pred EEEEEecCCCCCCceEEEeCCCceEEeCCCcEEEEEEEcCccCCCCEEEEEEECCCCCcEEEEEEcccCCccccCccccc
Confidence 456666542 233445556788999999999998876 358999985 22110 0113
Q ss_pred ceEEEeC-CCCCeEEEEccCCCCCCCeEEEEEeee
Q psy2442 57 RYMVQEF-PPGGSLLRIEPVRHARDDAVYECVAEN 90 (111)
Q Consensus 57 ~~~~~~~-~~~~~~l~~~~~~~~~d~g~y~c~~~~ 90 (111)
++..... ......|.|.++.. .|+|.|.|.+.+
T Consensus 186 r~~~~~~~~~~~~~L~I~~v~~-~D~G~Y~C~a~~ 219 (240)
T 1moe_A 186 KATITADTSSNTAYLQLTSLTS-EDTAVYYCAPFG 219 (240)
T ss_dssp TEEEEEETTTTEEEEEECSCCG-GGCEEEEEEECS
T ss_pred cEEEEEcccCCEEEEEECcCCH-HHCEEEEEEEEe
Confidence 4444321 11335599999998 999999999984
No 396
>3ux9_B SCFV antibody; five helices, long loop connecting helix, hydrophobic intera cytokine-immune system complex; 2.80A {Homo sapiens}
Probab=98.90 E-value=3.7e-08 Score=55.75 Aligned_cols=72 Identities=26% Similarity=0.482 Sum_probs=50.3
Q ss_pred ceeeecCCcEEEEEEEeccC--CCeEEEEEC--Ceec------cC----------CCCceEEEeCC-CCCeEEEEccCCC
Q psy2442 19 NQAVKAGGITSFYCIARGDP--IPVIQWRKN--GKRV------SG----------TQSRYMVQEFP-PGGSLLRIEPVRH 77 (111)
Q Consensus 19 ~~~~~~g~~~~l~c~~~~~~--~~~~~w~~~--~~~~------~~----------~~~~~~~~~~~-~~~~~l~~~~~~~ 77 (111)
...+..|++++|.|.+.+.+ .+.+.|++. +..+ .. ...++...... .....|.|.++..
T Consensus 143 ~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~ 222 (256)
T 3ux9_B 143 GGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRA 222 (256)
T ss_dssp CEEECTTCCEEEEEEEESSCGGGSEEEEEEECTTCCEEEEEEECSSSSCEEECGGGTTTEEEEEETTTTEEEEEECSCCG
T ss_pred CeEEcCCCeEEEEEEEeCCcccccEEEEEEECCCCCcEEEEEEccCCCceecCccccceEEEEecCCCCEEEEEECCCCh
Confidence 34588999999999998766 678999985 2211 00 11245444321 1334599999998
Q ss_pred CCCCeEEEEEeeeC
Q psy2442 78 ARDDAVYECVAENG 91 (111)
Q Consensus 78 ~~d~g~y~c~~~~~ 91 (111)
.|+|.|.|.+.|.
T Consensus 223 -~DsG~Y~C~~~~~ 235 (256)
T 3ux9_B 223 -EDTAVYYCARYID 235 (256)
T ss_dssp -GGCEEEEEEEEET
T ss_pred -hhCEEEEEEEEcC
Confidence 9999999999985
No 397
>1mju_H Immunoglobulin MS6-12; catalytic antibody, ester hydrolysis, esterolytic, FAB, immune system; 1.22A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mjj_B 1mie_H 1mj7_H* 1mj8_H 1mh5_B* 4aeh_H 2y5t_A 2vwe_E 2op4_H 2ntf_H 3loh_C 1e4x_H 2vl5_A 1e4x_I 1e4w_H 3opz_H 3oz9_H 1plg_H 1hi6_B 1cfn_B ...
Probab=98.90 E-value=6.2e-09 Score=58.16 Aligned_cols=103 Identities=12% Similarity=0.161 Sum_probs=54.6
Q ss_pred eEEecC----CCeeEEcCcceeeecCCcEEEEEEEecc-CCC-eEEEEECCeeccCC-CCceEEEeCC-CCCeEEEEccC
Q psy2442 4 KVRFLD----PPEITLRPRNQAVKAGGITSFYCIARGD-PIP-VIQWRKNGKRVSGT-QSRYMVQEFP-PGGSLLRIEPV 75 (111)
Q Consensus 4 ~l~v~~----~p~~~~~~~~~~~~~g~~~~l~c~~~~~-~~~-~~~w~~~~~~~~~~-~~~~~~~~~~-~~~~~l~~~~~ 75 (111)
+|.|.. +|.+........+..|+.++|.|.+.+. |.+ .+.|++++..+... ..... .... .....|.+...
T Consensus 111 ~L~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~g~~~~~~~~~~~~-~~g~~~~~s~L~i~~~ 189 (227)
T 1mju_H 111 LVTVSAAKTTAPSVYPLAPVCGDTSGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPAVL-QSDLYTLSSSVTVTSS 189 (227)
T ss_dssp EEEECSSCCBCCEEEEECCCC------CEEEEEEEEEEBSSCCEEEEGGGTBCTTEEECCCEE-ETTEEEEEEEEEECTT
T ss_pred EEEEcCCCCCCCEEEEecCCccccCCCcEEEEEEeecEeCCCeEEEEecCCCcCCcEECCcee-cCCeEEEEEEEEEchh
Confidence 566654 3444332222245679999999999885 666 89999987654210 01110 0000 01234778777
Q ss_pred CCCCCCeEEEEEeeeCCCceEeeEEEEEEecCCCC
Q psy2442 76 RHARDDAVYECVAENGVGDAVSAEASLTVYEGEEK 110 (111)
Q Consensus 76 ~~~~d~g~y~c~~~~~~~~~~~~~~~l~~~~~~~~ 110 (111)
.. .| |.|.|.+.|..+.. .....+.+.++|..
T Consensus 190 ~~-~~-g~Y~C~a~n~~~~~-~~~~~~~~~~~p~~ 221 (227)
T 1mju_H 190 TW-PS-QSITCNVAHPASST-KVDKKIEPRGPTIK 221 (227)
T ss_dssp TT-TT-SCCEEEEEEGGGTE-EEEEECCCCCC---
T ss_pred hc-CC-CeEEEEEEECCCCc-ceEEEeCCCCCCCC
Confidence 76 66 99999999976542 44445555555543
No 398
>1u3h_A T-cell receptor alpha-chain; complex, immune system; 2.42A {Mus musculus} SCOP: b.1.1.1 PDB: 1b88_A 1kj2_A* 1kb5_A 1d9k_A*
Probab=98.43 E-value=1.5e-10 Score=58.00 Aligned_cols=76 Identities=17% Similarity=0.243 Sum_probs=52.1
Q ss_pred EcCcceeeecCCcEEEEEEEeccCCCeEEEEECCe--ecc-----------CCCCceEEEeC-CCCCeEEEEccCCCCCC
Q psy2442 15 LRPRNQAVKAGGITSFYCIARGDPIPVIQWRKNGK--RVS-----------GTQSRYMVQEF-PPGGSLLRIEPVRHARD 80 (111)
Q Consensus 15 ~~~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~~~--~~~-----------~~~~~~~~~~~-~~~~~~l~~~~~~~~~d 80 (111)
+.+..+.+.+|++++|.|...+.+.+.+.|++... .+. ....|+..... ......|.|.+++. +|
T Consensus 4 Q~p~~v~v~~G~~v~L~C~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~-~D 82 (110)
T 1u3h_A 4 QSPQSLTVWEGETAILNCSYENSAFDYFPWYQQFPGEGPALLISILSVSDKKEDGRFTIFFNKREKKLSLHIADSQP-GD 82 (110)
Confidence 44556788899999999998777667899998632 110 11234443321 11223589999998 99
Q ss_pred CeEEEEEeeeC
Q psy2442 81 DAVYECVAENG 91 (111)
Q Consensus 81 ~g~y~c~~~~~ 91 (111)
+|.|.|.+.+.
T Consensus 83 sG~Y~C~~~~~ 93 (110)
T 1u3h_A 83 SATYFCAASAN 93 (110)
Confidence 99999998764
No 399
>3omz_A Human vdelta1 gamma delta T cell receptor delta1A; immunoglobulin fold, immune surveillance of cell stress PROT A/B, MIC-A/B binding, epithelium; 3.04A {Homo sapiens}
Probab=98.90 E-value=2e-08 Score=57.03 Aligned_cols=79 Identities=18% Similarity=0.236 Sum_probs=53.4
Q ss_pred CeeEEcCcceeeecCCcEEEEEEEecc-CCCeEEEEECCe--ecc-----------CCCCceEEEeC-CCCCeEEEEccC
Q psy2442 11 PEITLRPRNQAVKAGGITSFYCIARGD-PIPVIQWRKNGK--RVS-----------GTQSRYMVQEF-PPGGSLLRIEPV 75 (111)
Q Consensus 11 p~~~~~~~~~~~~~g~~~~l~c~~~~~-~~~~~~w~~~~~--~~~-----------~~~~~~~~~~~-~~~~~~l~~~~~ 75 (111)
+.+...+..+.+..|++++|.|...+. +.+.+.|++... .+. ....++..... ......|.|.++
T Consensus 137 ~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v 216 (259)
T 3omz_A 137 QKVTQAQSSVSMPVRKAVTLNCLYETSWWSYYIFWYKRLPSKEMIFLIRQGSDEQNAKSGRYSVNFKKAAKSVALTISAL 216 (259)
T ss_dssp CEEECCCCCEEEETTCCEEECCEEECCCSSCEEEEEEECTTCCEEEEEEEETTSCCCEETTEEECCBGGGTBCCEEESSC
T ss_pred eeeEEeCCEEEEcCCCCEEEEEECCCccCCceEEEeeeCCCCCcEEEEEECCcCCcccCCeEEEEEcCcCCEEEEEECCC
Confidence 456666777788999999999988764 677999998431 110 00123333210 112234999999
Q ss_pred CCCCCCeEEEEEeee
Q psy2442 76 RHARDDAVYECVAEN 90 (111)
Q Consensus 76 ~~~~d~g~y~c~~~~ 90 (111)
.. .|+|.|.|.+.+
T Consensus 217 ~~-~DsG~Y~C~~~~ 230 (259)
T 3omz_A 217 QL-EDSAKYFCALGE 230 (259)
T ss_dssp CG-GGCSEEEEEEES
T ss_pred Ch-hHCEEEEEEEeC
Confidence 98 999999999974
No 400
>1qok_A MFE-23 recombinant antibody fragment; immunoglobulin, single-chain FV, anti-carcinoembryonic antigen; 2.4A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=98.90 E-value=5e-08 Score=56.15 Aligned_cols=79 Identities=19% Similarity=0.356 Sum_probs=55.1
Q ss_pred EEcCcceeeecCCcEEEEEEEeccC--CCeEEEEECC--eecc----------------CCCCceEEEeC-CCCCeEEEE
Q psy2442 14 TLRPRNQAVKAGGITSFYCIARGDP--IPVIQWRKNG--KRVS----------------GTQSRYMVQEF-PPGGSLLRI 72 (111)
Q Consensus 14 ~~~~~~~~~~~g~~~~l~c~~~~~~--~~~~~w~~~~--~~~~----------------~~~~~~~~~~~-~~~~~~l~~ 72 (111)
...+..+.+..|++++|.|...+.+ .+.+.|++.+ ..+. ....|+..... ......|.|
T Consensus 30 ~~~p~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I 109 (282)
T 1qok_A 30 LQQSGAELVRSGTSVKLSCTASGFNIKDSYMHWLRQGPEQGLEWIGWIDPENGDTEYAPKFQGKATFTTDTSSNTAYLQL 109 (282)
T ss_dssp EEECCCEEEETTCCEEEEEEEESSCGGGSCEEEEEECTTCCEEEEEEEETTTTEEEECGGGBTTEEEEEETTTTEEEEEE
T ss_pred EECCCCEEEeCCCeEEEEEeccCCCCCCceEEEEEeCCCCCcEEEEEEecCCCccccCchhcCcEEEEEecCCCeEEEEE
Confidence 3455567889999999999988764 5689999853 1110 01245554432 112355999
Q ss_pred ccCCCCCCCeEEEEEeeeCCC
Q psy2442 73 EPVRHARDDAVYECVAENGVG 93 (111)
Q Consensus 73 ~~~~~~~d~g~y~c~~~~~~~ 93 (111)
.++.. .|+|.|.|.+.|..|
T Consensus 110 ~~v~~-~DsG~Y~C~~~n~~g 129 (282)
T 1qok_A 110 SSLTS-EDTAVYYCNEGTPTG 129 (282)
T ss_dssp CSCCG-GGCEEEEEEEECSSS
T ss_pred CcCCh-hhCEEEEEEeccCCC
Confidence 99998 999999999998764
No 401
>2j6e_L IGM, FAB light chain; autoimmune complex human IGM rheumatoid factor IGG1-FC, immunoglobulin C region, membrane, glycoprotein, transmembrane; HET: NAG FUL BMA MAN NDG GAL; 3.0A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=98.90 E-value=1e-08 Score=57.21 Aligned_cols=75 Identities=19% Similarity=0.279 Sum_probs=52.7
Q ss_pred CcceeeecCCcEEEEEEEeccC-CC-eEEEEECC--eec-----------cCCCCceEEEeCCCCCeEEEEccCCCCCCC
Q psy2442 17 PRNQAVKAGGITSFYCIARGDP-IP-VIQWRKNG--KRV-----------SGTQSRYMVQEFPPGGSLLRIEPVRHARDD 81 (111)
Q Consensus 17 ~~~~~~~~g~~~~l~c~~~~~~-~~-~~~w~~~~--~~~-----------~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~ 81 (111)
+..+.+..|++++|.|.+.+.+ .+ .+.|++.. ..+ .....++...... ....|.|.+++. .|+
T Consensus 26 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~-~~~~L~I~~v~~-~D~ 103 (234)
T 2j6e_L 26 PPSASGTPGQRVTISCSGSSSNIGSNYVYWYQQLPGTAPKLLIYRNNQRPSGVPDRFSGSKSG-TSASLAISGLRS-EDE 103 (234)
T ss_dssp CSCCCBCTTCEEEEEEECCTTTTTTSCCEEEEECSSSCCEEEEBTTTBCCSSSCTTEEEEEET-TEEEEEEESCCS-TTC
T ss_pred CCcEEeeCCCcEEEEEEecCCCCCCCeEEEEEecCCCCcEEEEECccccCCCccccEEEEecC-CeEEEEECCCCH-HHC
Confidence 5667888999999999988754 34 69999853 211 0112355443211 334599999998 999
Q ss_pred eEEEEEeeeCCC
Q psy2442 82 AVYECVAENGVG 93 (111)
Q Consensus 82 g~y~c~~~~~~~ 93 (111)
|.|.|.+.|..+
T Consensus 104 G~Y~C~~~~~~~ 115 (234)
T 2j6e_L 104 ADYYCATWDDSL 115 (234)
T ss_dssp SEEEEEEEETTT
T ss_pred EEEEEEEEcCCc
Confidence 999999998765
No 402
>3ux9_B SCFV antibody; five helices, long loop connecting helix, hydrophobic intera cytokine-immune system complex; 2.80A {Homo sapiens}
Probab=98.90 E-value=3.5e-08 Score=55.85 Aligned_cols=74 Identities=15% Similarity=0.251 Sum_probs=51.9
Q ss_pred cceeeecCCcEEEEEEEecc--CCCeEEEEECC--eecc-----------CCCCceEEEeCCCCCeEEEEccCCCCCCCe
Q psy2442 18 RNQAVKAGGITSFYCIARGD--PIPVIQWRKNG--KRVS-----------GTQSRYMVQEFPPGGSLLRIEPVRHARDDA 82 (111)
Q Consensus 18 ~~~~~~~g~~~~l~c~~~~~--~~~~~~w~~~~--~~~~-----------~~~~~~~~~~~~~~~~~l~~~~~~~~~d~g 82 (111)
..+.+.+|++++|.|...+. +.+.+.|++.. ..+. ....++...... ....|.|.++.. .|+|
T Consensus 10 ~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~-~~~~L~I~~v~~-~DsG 87 (256)
T 3ux9_B 10 PSVSGAPGQRVTISCSGSSSNIGSNYVSWYQQLPGTAPKLLIYDNNQRPSGVPDRFSGSKSG-TSASLAITGLQS-EDEA 87 (256)
T ss_dssp SEEEECTTCCEEEEEECCTTTTTTSCCEEEEECTTSCCEEEEBTTTBCCTTCCTTEEEEEET-TEEEEEECSCCG-GGCE
T ss_pred CcEEEcCCCcEEEEEecCCCCCCCceEEEEEECCCCCCEEEEEecCCCCCCcCCcEEEEccC-CEEEEEECCCCh-hhCE
Confidence 34678899999999999876 67789999842 1110 012355443221 334599999998 9999
Q ss_pred EEEEEeeeCCC
Q psy2442 83 VYECVAENGVG 93 (111)
Q Consensus 83 ~y~c~~~~~~~ 93 (111)
.|.|.+.+..+
T Consensus 88 ~Y~C~~~~~~~ 98 (256)
T 3ux9_B 88 DYYCQVRDNNE 98 (256)
T ss_dssp EEEEEEEETTT
T ss_pred EEEEEEEECCC
Confidence 99999988543
No 403
>1za6_B IGG heavy chain; immunoglobulin fold, CH2-domain-deletion, immune system; 2.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2
Probab=98.90 E-value=2.9e-08 Score=58.53 Aligned_cols=87 Identities=22% Similarity=0.352 Sum_probs=57.3
Q ss_pred CcceeeecCCcEEEEEEEeccC--CCeEEEEEC--Ceecc----------------CCCCceEEEeCC-CCCeEEEEccC
Q psy2442 17 PRNQAVKAGGITSFYCIARGDP--IPVIQWRKN--GKRVS----------------GTQSRYMVQEFP-PGGSLLRIEPV 75 (111)
Q Consensus 17 ~~~~~~~~g~~~~l~c~~~~~~--~~~~~w~~~--~~~~~----------------~~~~~~~~~~~~-~~~~~l~~~~~ 75 (111)
+..+.+..|+.+.|.|.+.+.+ .+.+.|+++ +..+. ....|+.+.... .....|.|.++
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v 86 (344)
T 1za6_B 7 SGAEVVKPGASVKISCKASGYTFTDHAIHWVKQNPGQRLEWIGYFSPGNDDFKYNERFKGKATLTADTSASTAYVELSSL 86 (344)
T ss_dssp CCCEEECTTCCEEEEEEEESSCTTSSCEEEEEECSSSCEEEEEEEETTTTEEEECTTTBTTEEEEEETTTTEEEEEECSC
T ss_pred CCCeEEeCCCcEEEEEEcCCccccccEEEEEEECCCCCcEEEEEEecCCCceEECcccCCcEEEEEecCCCEEEEEECCC
Confidence 3446788999999999998763 568999986 32210 112455554321 13346999999
Q ss_pred CCCCCCeEEEEEeeeCCCceEeeEEEEEEe
Q psy2442 76 RHARDDAVYECVAENGVGDAVSAEASLTVY 105 (111)
Q Consensus 76 ~~~~d~g~y~c~~~~~~~~~~~~~~~l~~~ 105 (111)
.. .|+|.|.|.+.|..+. ......|.|.
T Consensus 87 ~~-~D~G~Y~C~~~n~~~~-~~~~~~l~V~ 114 (344)
T 1za6_B 87 RS-EDTAVYFCTRSLNMAY-WGQGTLVTVS 114 (344)
T ss_dssp CG-GGCEEEEEEETTTTCE-ECCCEEEEEC
T ss_pred Cc-ccCEEEEEEEecCcce-ecCcEEEEEe
Confidence 98 9999999999885432 1333445554
No 404
>2fbj_H IGA-kappa J539 FAB (heavy chain); immunoglobulin; HET: NAG FUC; 1.95A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mcp_H 2mcp_H*
Probab=98.90 E-value=3.1e-08 Score=55.04 Aligned_cols=90 Identities=13% Similarity=0.166 Sum_probs=55.9
Q ss_pred eEEecC----CCeeEEcCcceeeecCCcEEEEEEEecc-CC--CeEEEEECCeeccCCCCceEEEeCCC---CCeEEEEc
Q psy2442 4 KVRFLD----PPEITLRPRNQAVKAGGITSFYCIARGD-PI--PVIQWRKNGKRVSGTQSRYMVQEFPP---GGSLLRIE 73 (111)
Q Consensus 4 ~l~v~~----~p~~~~~~~~~~~~~g~~~~l~c~~~~~-~~--~~~~w~~~~~~~~~~~~~~~~~~~~~---~~~~l~~~ 73 (111)
+|.|.. +|.+...+ ...+..|+.++|.|.+.+. |. +.+.|++++..+......... ..++ ....|.+.
T Consensus 113 ~L~V~~~~~~~P~v~~~~-~~~~~~g~~v~L~C~~~g~~P~~~~~v~W~~~~~~~~~~~~~~~~-~~~g~~~~~s~L~i~ 190 (220)
T 2fbj_H 113 LVTVSAESARNPTIYPLT-LPPALSSDPVIIGCLIHDYFPSGTMNVTWGKSGKDITTVNFPPAL-ASGGRYTMSNQLTLP 190 (220)
T ss_dssp EEEECSSCCBCCEEEEEC-CCSSSCCSSEEEEEEEEEEBSCCCEEEEESCCCSSCEEEECCCEE-CSSSCEEEEEEEEEC
T ss_pred EEEecCCCCCCCEEEEee-cccccCCCcEEEEEEEEeEECCCcEEEEEecCCEecceEecCceE-CCCCCEEEEEEEEEC
Confidence 566653 34444333 2345689999999999886 55 589999987654210000000 0010 01237777
Q ss_pred cCCCCCCCeEEEEEeeeCCCceE
Q psy2442 74 PVRHARDDAVYECVAENGVGDAV 96 (111)
Q Consensus 74 ~~~~~~d~g~y~c~~~~~~~~~~ 96 (111)
.... .|.|.|.|.+.|..+...
T Consensus 191 ~~~~-~d~g~ytC~v~n~~~~~~ 212 (220)
T 2fbj_H 191 AVEC-PEGESVKCSVQHDSNPVQ 212 (220)
T ss_dssp GGGS-CTTCEEEEEEEETTSCCE
T ss_pred HHHc-CCCCeEEEEEEcCCCceE
Confidence 7776 789999999999887643
No 405
>2qhl_A Novel immune-type receptor 10; immunoglobulin variable domain-like beta-sandwich, immune system; 1.56A {Ictalurus punctatus} PDB: 3b5t_A 2qjd_A 2qte_A 2qqq_A
Probab=98.89 E-value=8.4e-09 Score=51.63 Aligned_cols=74 Identities=20% Similarity=0.243 Sum_probs=51.9
Q ss_pred cCcceeeecCCcEEEEEEEe-ccCCCeEEEEECC--ee---c---c--C--------C-CCceEEEeCCCCCeEEEEccC
Q psy2442 16 RPRNQAVKAGGITSFYCIAR-GDPIPVIQWRKNG--KR---V---S--G--------T-QSRYMVQEFPPGGSLLRIEPV 75 (111)
Q Consensus 16 ~~~~~~~~~g~~~~l~c~~~-~~~~~~~~w~~~~--~~---~---~--~--------~-~~~~~~~~~~~~~~~l~~~~~ 75 (111)
.+..+.+.+|++++|.|... +.+...+.|++.. .. + . . . ..|+...... ....|.|.++
T Consensus 5 ~p~~~~~~~G~~v~L~C~~~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~~~R~~~~~~~-~~~~L~I~~~ 83 (111)
T 2qhl_A 5 ELHVKTVKRGENVTMECSMSKVKDKDKLAWYRQSFGKVPQYFVRYYSSNSGYKFAEGFKDSRFSMTVND-QKFDLNIIGT 83 (111)
T ss_dssp BCEEEECCTTCCEEECCBCTTCSCGGGEEEEEECTTBCCEEEEEECSSSSCEEECTTCCCTTEEEEESS-SBEEEEESSC
T ss_pred CCceEEEeCCCCEEEEEEccCCcccceEEEEEecCCCCCEEEEEEeccCCccccccCCCCCcEEEEEcC-CeEEEEECCC
Confidence 34556788999999999987 6556689998742 11 1 0 0 0 3455554322 3446999999
Q ss_pred CCCCCCeEEEEEeeeC
Q psy2442 76 RHARDDAVYECVAENG 91 (111)
Q Consensus 76 ~~~~d~g~y~c~~~~~ 91 (111)
+. +|+|.|.|.+.+.
T Consensus 84 ~~-~DsG~Y~C~~~~~ 98 (111)
T 2qhl_A 84 RE-DDGGEYFCGEVEG 98 (111)
T ss_dssp CG-GGCEEEEEEEEET
T ss_pred Ch-hHCEEEEEEEccC
Confidence 98 9999999998874
No 406
>4frw_A Poliovirus receptor-related protein 4; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; 3.50A {Homo sapiens}
Probab=98.89 E-value=4.4e-08 Score=53.65 Aligned_cols=88 Identities=18% Similarity=0.244 Sum_probs=56.0
Q ss_pred cCcceeeecCCcEEEEEEEeccCCC---eEEEEECCeeccCC-----------------CCceEEEeC--CCCCeEEEEc
Q psy2442 16 RPRNQAVKAGGITSFYCIARGDPIP---VIQWRKNGKRVSGT-----------------QSRYMVQEF--PPGGSLLRIE 73 (111)
Q Consensus 16 ~~~~~~~~~g~~~~l~c~~~~~~~~---~~~w~~~~~~~~~~-----------------~~~~~~~~~--~~~~~~l~~~ 73 (111)
.+..+.+..|+++.|.|.+.+.+.+ .+.|++.+...... ..++..... ......|.|.
T Consensus 5 ~p~~vtv~~G~~v~L~C~v~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~sL~I~ 84 (218)
T 4frw_A 5 TSDVVTVVLGQDAKLPCFYRGDSGEQVGQVAWARVDAGEGAQELALLHSKYGLHVSPAYEGRVEQPPPPRNPLDGSVLLR 84 (218)
T ss_dssp CCSEEEEETTSCEEECCEECCCTTCEEEEEEEEEECSSSCEEEEEEEETTTEEEECGGGTTTEECCSSCCCTTBCCEEES
T ss_pred CCCeEEEEcCCCEEEEEEEEcCCCCCccEEEEEECCCCCCceeEEEecCCCCeEeCccccceEEEecccccCCeEEEEEe
Confidence 4556788999999999999887765 37899876543210 011111110 0012348999
Q ss_pred cCCCCCCCeEEEEEeeeCCCceEeeEEEEEE
Q psy2442 74 PVRHARDDAVYECVAENGVGDAVSAEASLTV 104 (111)
Q Consensus 74 ~~~~~~d~g~y~c~~~~~~~~~~~~~~~l~~ 104 (111)
++.. .|+|.|.|.+.+..+........+.+
T Consensus 85 ~v~~-~D~G~Y~C~~~~~~~~~~~~~~~~~~ 114 (218)
T 4frw_A 85 NAVQ-ADEGEYECRVSTFPAGSFQARLRLRV 114 (218)
T ss_dssp SCCG-GGCEEEEEEEEEETTEEEEEEEEEEE
T ss_pred eccH-HHCCceeEEEEeccCceeeeEEEEEE
Confidence 9998 99999999988765543233333333
No 407
>3esu_F Antibody 14B7* light chain and antibody 14B7* heavy chain linked with A synthetic...; single-chain FV, monoclonal antibody, immunoglobulin; 1.30A {Mus musculus} PDB: 3et9_F 3esv_F 3etb_F 1h8n_A 1h8s_A* 1h8o_A*
Probab=98.89 E-value=1.4e-08 Score=57.32 Aligned_cols=75 Identities=17% Similarity=0.329 Sum_probs=51.7
Q ss_pred EcCcceeeecCCcEEEEEEEeccC--CCeEEEEEC--Ceecc----------------CCCCceEEEeCC-CCCeEEEEc
Q psy2442 15 LRPRNQAVKAGGITSFYCIARGDP--IPVIQWRKN--GKRVS----------------GTQSRYMVQEFP-PGGSLLRIE 73 (111)
Q Consensus 15 ~~~~~~~~~~g~~~~l~c~~~~~~--~~~~~w~~~--~~~~~----------------~~~~~~~~~~~~-~~~~~l~~~ 73 (111)
..+....+..|++++|.|.+.+.+ .+.+.|+++ +..+. ....++...... .....|.|.
T Consensus 136 ~~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~ 215 (250)
T 3esu_F 136 QQSGPELVKPGASVKISCKDSGYAFSSSWMNWVKQRPGQGPEWIGRIYPGDGDTNYNGKFKGKATLTADKSSSTAYMQLS 215 (250)
T ss_dssp EECCCEEECTTCCEEEEEECCSTTGGGSEEEEEEECTTSCCEEEEEEETTTTEEEECGGGTTTEEEEEEGGGTEEEEEEC
T ss_pred ecCCceEEcCCceEEEEEEecCCcccCCEEEEEEECCCCCcEEEEEEeccCCccccCccccceEEEEecCCCCeEEEEEC
Confidence 344556788999999999998766 678999986 33221 001344443211 123359999
Q ss_pred cCCCCCCCeEEEEEeee
Q psy2442 74 PVRHARDDAVYECVAEN 90 (111)
Q Consensus 74 ~~~~~~d~g~y~c~~~~ 90 (111)
++.. .|+|.|.|.+.+
T Consensus 216 ~v~~-~DsG~Y~C~~~~ 231 (250)
T 3esu_F 216 SLTS-VDSAVYFCARSG 231 (250)
T ss_dssp SCCG-GGCEEEEEEEEC
T ss_pred CCCc-ccCEEEEEEEec
Confidence 9998 999999999986
No 408
>2oz4_A Intercellular adhesion molecule 1; IGSF domain, structural plasticity, cell-surface dimerizatio adhesion; HET: NAG FUC; 2.70A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 b.1.1.4 PDB: 1p53_A*
Probab=98.89 E-value=5.1e-08 Score=55.42 Aligned_cols=78 Identities=13% Similarity=0.246 Sum_probs=54.9
Q ss_pred eeecCCcEEEEEEEec-cCCC--eEEEEECCeeccCCCCceEEEeCCCCCeEEEEccC---CCCCCCeE--EEEEeeeCC
Q psy2442 21 AVKAGGITSFYCIARG-DPIP--VIQWRKNGKRVSGTQSRYMVQEFPPGGSLLRIEPV---RHARDDAV--YECVAENGV 92 (111)
Q Consensus 21 ~~~~g~~~~l~c~~~~-~~~~--~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~---~~~~d~g~--y~c~~~~~~ 92 (111)
.+..|+.+.|.|.+.+ .|.+ .+.|++++..+.. .. .. ....+.+..+ .. .|.|. |.|.+.|..
T Consensus 14 ~v~~G~~v~l~C~~~g~~p~p~~~v~W~k~~~~l~~---~~--~~---~~~~~~~~~~~~~~~-~d~g~g~Y~C~a~n~~ 84 (265)
T 2oz4_A 14 VLEVDTQGTVVCSLDGLFPVSEAQVHLALGDQRLNP---TV--TY---GNDSFSAKASVSVTA-EDEGTQRLTCAVILGN 84 (265)
T ss_dssp EEETTEEEEEEEEEESCSCGGGCEEEEEETTEECCC---EE--EE---CSSEEEEEEEEEECG-GGCEEEEEEEEEEETT
T ss_pred eEecCCCEEEEEEccCCCCCcceEEEEEeCCEECCc---eE--ee---CCCeEEEEeeccccc-ccCCcceEEEEEecCC
Confidence 5789999999999988 6666 8999999988753 11 11 1222444333 55 77775 999999988
Q ss_pred CceEeeEEEEEEecCC
Q psy2442 93 GDAVSAEASLTVYEGE 108 (111)
Q Consensus 93 ~~~~~~~~~l~~~~~~ 108 (111)
+.. .....|.+...|
T Consensus 85 ~~~-~~~~~l~V~~~p 99 (265)
T 2oz4_A 85 QSQ-ETLQTVTIYSFP 99 (265)
T ss_dssp EEE-EEEEEEEEECCC
T ss_pred CCc-EEEEEEEEeCCC
Confidence 763 667777776543
No 409
>1c1e_H Catalytic antibody 1E9 (heavy chain); diels-alder, immunoglobulin, immune system; HET: ENH; 1.90A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1dbb_H* 1dba_H* 1dbj_H* 1dbk_H* 1dbm_H* 2dbl_H* 3ojd_B 1jgl_H* 1jhk_H 1ghf_H 1tet_H* 3e8u_H 1fj1_B 1cl7_H
Probab=98.89 E-value=4.5e-08 Score=54.15 Aligned_cols=75 Identities=21% Similarity=0.333 Sum_probs=52.4
Q ss_pred CcceeeecCCcEEEEEEEeccC--CCeEEEEEC--Ceecc----------------CCCCceEEEeCC-CCCeEEEEccC
Q psy2442 17 PRNQAVKAGGITSFYCIARGDP--IPVIQWRKN--GKRVS----------------GTQSRYMVQEFP-PGGSLLRIEPV 75 (111)
Q Consensus 17 ~~~~~~~~g~~~~l~c~~~~~~--~~~~~w~~~--~~~~~----------------~~~~~~~~~~~~-~~~~~l~~~~~ 75 (111)
+..+.+..|+++.|.|.+.+.+ .+.+.|++. +..+. ....|+...... .....|.|.++
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v 86 (219)
T 1c1e_H 7 SGPELKKPGETVKISCKASGYMFTNYGMNWVKQAPGKALKLMGWINPYTGESTFADDFKGRFAFFLETSATTAYLQINNL 86 (219)
T ss_dssp CCCEEECTTCCEEEEEEEESSCGGGSEEEEEEECTTSCEEEEEEECSSSCCEEECGGGCSSEEEEEEGGGTEEEEEECSC
T ss_pred CCCeEecCCCcEEEEEEEeCcccccceEEEEEeCCCCCcEEEEEEecCCCceEeCcccCCcEEEEEecCCCEEEEEECCC
Confidence 4456788999999999998764 568999986 32210 012355443211 12345999999
Q ss_pred CCCCCCeEEEEEeeeCC
Q psy2442 76 RHARDDAVYECVAENGV 92 (111)
Q Consensus 76 ~~~~d~g~y~c~~~~~~ 92 (111)
.. .|+|.|.|.+.+..
T Consensus 87 ~~-~D~G~Y~C~~~~~~ 102 (219)
T 1c1e_H 87 KN-EDMATYFCARGTTI 102 (219)
T ss_dssp CG-GGCEEEEEEEEETT
T ss_pred Cc-ccCEEEEEEEeccC
Confidence 98 99999999999875
No 410
>2oyp_A Hepatitis A virus cellular receptor 2; TIM-3, T-cell immunoglobulin mucin, signaling protein; 1.95A {Mus musculus} PDB: 3kaa_A*
Probab=98.89 E-value=8.9e-09 Score=51.06 Aligned_cols=84 Identities=19% Similarity=0.139 Sum_probs=53.3
Q ss_pred eeeecCCcEEEEEEEeccCCC---eEEEEECCeec----------cC------CCCceEEEeC-CCCCeEEEEccCCCCC
Q psy2442 20 QAVKAGGITSFYCIARGDPIP---VIQWRKNGKRV----------SG------TQSRYMVQEF-PPGGSLLRIEPVRHAR 79 (111)
Q Consensus 20 ~~~~~g~~~~l~c~~~~~~~~---~~~w~~~~~~~----------~~------~~~~~~~~~~-~~~~~~l~~~~~~~~~ 79 (111)
+.+..|++++|.|...+.+.. .+.|++..... .. ...++.+... ......|.|.+++. .
T Consensus 4 v~~~~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~g~~~~~~~~~r~~~~~~~~~~~~sL~I~~v~~-~ 82 (109)
T 2oyp_A 4 YKVEVGKNAYLPCSYTLPTSGTLVPMCWGKGFCPWSQCTNELLRTDERNVTYQKSSRYQLKGDLNKGDVSLIIKNVTL-D 82 (109)
T ss_dssp EEECTTSCEEECCBCCCCTTCCCCCEEEESSSCCSSSCSSEEEEECSSSEEEESCTTEEECSCGGGTBCCEEECSCCG-G
T ss_pred EEEEcCCCEEEEEEeECCCCCCeEEEEEEecCCCCCCceeEEEEcCCcCccccccceEEEccCccCCcEeEEEccCCC-h
Confidence 567889999999998765432 48999864320 00 1133333211 01223599999998 9
Q ss_pred CCeEEEEEeeeCCCceEeeEEEEEEe
Q psy2442 80 DDAVYECVAENGVGDAVSAEASLTVY 105 (111)
Q Consensus 80 d~g~y~c~~~~~~~~~~~~~~~l~~~ 105 (111)
|+|.|.|.+.+..+.. ...+.|.|.
T Consensus 83 D~G~Y~C~v~~~~~~~-~~~~~l~V~ 107 (109)
T 2oyp_A 83 DHGTYCCRIQFPGLMN-DKKLELKLD 107 (109)
T ss_dssp GCEEEEEEECCSSTTC-CEEEEEEEE
T ss_pred hCeEEEEEEEcCCccc-ceEEEEEEE
Confidence 9999999999876542 445555443
No 411
>2ghw_B Anti-SARS SCFV antibody, 80R; S protein, neutralizing antibody, virus/viral protein/antibiotic complex; 2.30A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1
Probab=98.89 E-value=3.4e-08 Score=55.59 Aligned_cols=73 Identities=21% Similarity=0.430 Sum_probs=51.9
Q ss_pred cceeeecCCcEEEEEEEeccC--CCeEEEEECC--eec----------------cCCCCceEEEeC-CCCCeEEEEccCC
Q psy2442 18 RNQAVKAGGITSFYCIARGDP--IPVIQWRKNG--KRV----------------SGTQSRYMVQEF-PPGGSLLRIEPVR 76 (111)
Q Consensus 18 ~~~~~~~g~~~~l~c~~~~~~--~~~~~w~~~~--~~~----------------~~~~~~~~~~~~-~~~~~~l~~~~~~ 76 (111)
..+.+..|++++|.|.+.+.+ .+.+.|++.. ..+ .....++..... ......|.|.++.
T Consensus 10 ~~~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~ 89 (247)
T 2ghw_B 10 GGGVVQPGKSLRLSCAASGFAFSSYAMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLR 89 (247)
T ss_dssp CCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEEETTTTEEEEEECSCC
T ss_pred CCEEEecCCcEEEEEEeccccCCCceEEEEEeCCCCceEEEEEEecCCCceeeCccccCcEEEEEeCCCCEEEEEECcCC
Confidence 346888999999999998876 5689999842 110 011245555432 1123459999999
Q ss_pred CCCCCeEEEEEeeeC
Q psy2442 77 HARDDAVYECVAENG 91 (111)
Q Consensus 77 ~~~d~g~y~c~~~~~ 91 (111)
. .|+|.|.|.+.|.
T Consensus 90 ~-~D~G~Y~C~~~n~ 103 (247)
T 2ghw_B 90 A-EDTAVYYCARDRS 103 (247)
T ss_dssp G-GGCEEEEEEEEET
T ss_pred H-HHCEEEEEeeecc
Confidence 8 9999999999987
No 412
>3nl4_H Antigen binding fragment,immunoglobulin IGG - HEA; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_H
Probab=98.89 E-value=7.8e-08 Score=53.11 Aligned_cols=75 Identities=20% Similarity=0.352 Sum_probs=51.4
Q ss_pred CcceeeecCCcEEEEEEEecc--CCCeEEEEECC--eecc---------------CCCCceEEEeCCCCCeEEEEccCCC
Q psy2442 17 PRNQAVKAGGITSFYCIARGD--PIPVIQWRKNG--KRVS---------------GTQSRYMVQEFPPGGSLLRIEPVRH 77 (111)
Q Consensus 17 ~~~~~~~~g~~~~l~c~~~~~--~~~~~~w~~~~--~~~~---------------~~~~~~~~~~~~~~~~~l~~~~~~~ 77 (111)
+..+.+..|++++|.|...+. +.+.+.|++.. .... ....|+.... ......|.|.++..
T Consensus 6 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~-~~~~~~L~I~~v~~ 84 (215)
T 3nl4_H 6 SGGRLVTPGTPLTLACTVSGFSLNTYSMFWVRQAPGKGLQWIGIISNFGVIYYATWAKGRFTISK-TSTTVDLKITSPTT 84 (215)
T ss_dssp ECCCEECTTCCEEEEEEEESSCTTTCCEEEEEECTTSCEEEEEEECTTCCEEECGGGTTTEEEEE-CSSEEEEEESSCCG
T ss_pred CCCEEEcCCCcEEEEEEecCcccCCCeEEEEEECCCCCeEEEEEEecCCccccCCcccCCEEEEe-eCCEEEEEECCCCc
Confidence 445678899999999998763 35689998732 1100 0124555443 22334599999998
Q ss_pred CCCCeEEEEEeeeCCC
Q psy2442 78 ARDDAVYECVAENGVG 93 (111)
Q Consensus 78 ~~d~g~y~c~~~~~~~ 93 (111)
.|+|.|.|.+.+..+
T Consensus 85 -~D~G~Y~C~~~~~~~ 99 (215)
T 3nl4_H 85 -EDTATYFCVRKYGSE 99 (215)
T ss_dssp -GGCEEEEEEEECSSS
T ss_pred -ccCEEEEEEEecCCC
Confidence 999999999988643
No 413
>3bj9_1 Immunoglobulin IOTA chain, immunoglobulin lambda- like polypeptide 1; immunoglobulin domain, beta sheet, polymorphism, immune system; 2.00A {Homo sapiens} PDB: 2h3n_A
Probab=98.88 E-value=7e-08 Score=48.53 Aligned_cols=72 Identities=17% Similarity=0.323 Sum_probs=48.3
Q ss_pred ceeeecCCcEEEEEEEecc---CCCeEEEEECC--ee---c-c-----------CCCCceEEEeCCC-CCeEEEEccCCC
Q psy2442 19 NQAVKAGGITSFYCIARGD---PIPVIQWRKNG--KR---V-S-----------GTQSRYMVQEFPP-GGSLLRIEPVRH 77 (111)
Q Consensus 19 ~~~~~~g~~~~l~c~~~~~---~~~~~~w~~~~--~~---~-~-----------~~~~~~~~~~~~~-~~~~l~~~~~~~ 77 (111)
.+.+.+|++++|.|..... ....+.|++.. .. + . ....|+....... ....|.|.+++.
T Consensus 7 ~~~~~~G~~v~L~C~~~~~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~~~~ 86 (116)
T 3bj9_1 7 AMSSALGTTIRLTCTLRNDHDIGVYSVYWYQQRPGHPPRFLLRYFSQSDKSQGPQVPPRFSGSKDVARNRGYLSISELQP 86 (116)
T ss_dssp EEEEETTCCEEEEEEECSSSCGGGCCEEEEEECTTSCCEEEEEEEETTEEEECTTCCTTEEEEEEGGGTEEEEEECSCCG
T ss_pred cEEEcCCCcEEEEEEeecCccCCCceEEEEEeCCCCCcEEEEEEecCCCceeCccCCCcEEEEecCCCceEEEEECCCCh
Confidence 4788899999999998653 34579998742 11 1 0 0123454432210 122599999998
Q ss_pred CCCCeEEEEEeeeC
Q psy2442 78 ARDDAVYECVAENG 91 (111)
Q Consensus 78 ~~d~g~y~c~~~~~ 91 (111)
+|+|.|.|.+.+.
T Consensus 87 -~DsG~Y~C~~~~~ 99 (116)
T 3bj9_1 87 -EDEAMYYCAMGAR 99 (116)
T ss_dssp -GGCEEEEEEECCS
T ss_pred -hHCEEEEEEEeCC
Confidence 9999999998764
No 414
>3kgr_A LAIR-1, hlair1, leukocyte-associated immunoglobulin-like receptor; IG-like domain, cell membrane, glycoprotein; 1.80A {Homo sapiens} PDB: 3rp1_A
Probab=98.88 E-value=2.2e-08 Score=49.78 Aligned_cols=97 Identities=16% Similarity=0.253 Sum_probs=60.7
Q ss_pred ecCCCeeEEcCcceeeecCCcEEEEEEEeccCCCeEEEEECCeeccCCCCceEEEeCCCCCeEEEEccCCCCCCCeEEEE
Q psy2442 7 FLDPPEITLRPRNQAVKAGGITSFYCIARGDPIPVIQWRKNGKRVSGTQSRYMVQEFPPGGSLLRIEPVRHARDDAVYEC 86 (111)
Q Consensus 7 v~~~p~~~~~~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~g~y~c 86 (111)
...+|.+...+.. .+..|+.++|.|..... ...+.|+++|.....................|.|..+.. .|+|.|.|
T Consensus 6 ~~pkPsL~a~P~~-vv~~G~~VtL~C~~~~~-~~~f~l~k~g~~~~~~~~~~~~~~~~~~~~~f~i~~vt~-~~aG~Y~C 82 (106)
T 3kgr_A 6 DLPRPSISAEPGT-VIPLGSHVTFVCRGPVG-VQTFRLERESRSTYNDTEDVSQASPSESEARFRIDSVSE-GNAGPYRC 82 (106)
T ss_dssp CCCCCEEEEESCS-EEETTCCEEEEEEECTT-CCEEEEEEGGGTEEEEECCCEEEETTEEEEEEEESSCCG-GGCEEEEE
T ss_pred CCCCCEEEEeCCC-ccCCCCeEEEEEEccCC-CcEEEEEECCCccccccccccccCCCCcceEEEecCCCc-CCCceEEE
Confidence 3456777666654 77899999999987543 347889998764310000001100000234588999998 99999999
Q ss_pred EeeeCCC-ceEeeEEEEEEec
Q psy2442 87 VAENGVG-DAVSAEASLTVYE 106 (111)
Q Consensus 87 ~~~~~~~-~~~~~~~~l~~~~ 106 (111)
...+..+ ...+..+.|.|.+
T Consensus 83 ~~~~~~~~S~~Sdpl~L~Vtg 103 (106)
T 3kgr_A 83 IYYKPPKWSEQSDYLELLVKE 103 (106)
T ss_dssp EEEETTEECCCCCCEEEEEEC
T ss_pred EeeCCCcccCCCCCEEEEEeC
Confidence 9887532 2235667777654
No 415
>1op3_H FAB 2G12, heavy chain; domain-swapped FAB 2G12, anti-carbohydrate antibody, immune system; HET: MAN; 1.75A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1om3_H* 1op5_H* 3oay_M* 1zlu_H* 1zlv_H* 1zlw_H* 2oqj_B 1zls_H* 3ob0_H* 3oau_H* 3oaz_H* 3ghe_H 3eyf_B 3eyo_B 3ghb_H 3c2a_H 1q1j_H 2fl5_H*
Probab=98.88 E-value=1.2e-07 Score=52.75 Aligned_cols=75 Identities=20% Similarity=0.314 Sum_probs=52.6
Q ss_pred cceeeecCCcEEEEEEEeccC--CCeEEEEECC--eecc----------------CCCCceEEEeCC-CCCeEEEEccCC
Q psy2442 18 RNQAVKAGGITSFYCIARGDP--IPVIQWRKNG--KRVS----------------GTQSRYMVQEFP-PGGSLLRIEPVR 76 (111)
Q Consensus 18 ~~~~~~~g~~~~l~c~~~~~~--~~~~~w~~~~--~~~~----------------~~~~~~~~~~~~-~~~~~l~~~~~~ 76 (111)
..+.+..|++++|.|...+.+ .+.+.|++.. ..+. ....|+...... .....|.|.++.
T Consensus 8 ~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~ 87 (225)
T 1op3_H 8 GGGLVKAGGSLILSCGVSNFRISAHTMNWVRRVPGGGLEWVASISTSSTYRDYADAVKGRFTVSRDDLEDFVYLQMHKMR 87 (225)
T ss_dssp CCEEEETTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECGGGCCEEECTTTTTTEEEEEETTTTEEEEEECSCC
T ss_pred CCeEecCCCCEEEEEEecCcccCCceEEEEEeCCCCCcEEEEEEccCCCccccCcccCCceEEEecCCCCEEEEEECCCC
Confidence 346788999999999998765 5689999742 2110 112455554321 123459999999
Q ss_pred CCCCCeEEEEEeeeCCC
Q psy2442 77 HARDDAVYECVAENGVG 93 (111)
Q Consensus 77 ~~~d~g~y~c~~~~~~~ 93 (111)
. .|+|.|.|.+.+..+
T Consensus 88 ~-~D~G~Y~C~~~~~~~ 103 (225)
T 1op3_H 88 V-EDTAIYYCARKGSDR 103 (225)
T ss_dssp G-GGCEEEEEEEECCSS
T ss_pred h-hhCEEEEEEEecCCC
Confidence 8 999999999998653
No 416
>1bec_A 14.3.D T cell antigen receptor; T cell receptor; 1.70A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1jck_A 1l0x_A 1sbb_A 1l0y_A 3c6l_B 1mwa_B* 1g6r_B* 1tcr_B* 2ckb_B 2q86_B* 1lp9_F 2j8u_F 2jcc_F 2uwe_F 3mbe_D* 1d9k_B* 2aq3_A 3mc0_A 3byt_A 3bzd_A ...
Probab=98.88 E-value=9.8e-08 Score=53.60 Aligned_cols=76 Identities=20% Similarity=0.358 Sum_probs=52.9
Q ss_pred EEcCcceeeecCCcEEEEEEEeccCCCeEEEEECC--eecc--------------CCCCceEEEeCCCCCeEEEEccCCC
Q psy2442 14 TLRPRNQAVKAGGITSFYCIARGDPIPVIQWRKNG--KRVS--------------GTQSRYMVQEFPPGGSLLRIEPVRH 77 (111)
Q Consensus 14 ~~~~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~~--~~~~--------------~~~~~~~~~~~~~~~~~l~~~~~~~ 77 (111)
.+.+..+.+..|++++|.|... .+.+.+.|++.. ..+. ....|+...........|.|.+++.
T Consensus 3 ~q~p~~v~v~~G~~v~L~C~~~-~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~R~~~~~~~~~~~~L~I~~v~~ 81 (238)
T 1bec_A 3 TQSPRNKVAVTGGKVTLSCQQT-NNHNNMYWYRQDTGHGLRLIHYSYGAGSTEKGDIPDGYKASRPSQEQFSLILELATP 81 (238)
T ss_dssp EEECSEEEEETTCCEEEEEEES-SCCSEEEEEEECTTSCEEEEEEEEETTEEEECSCCTTCEEECCSSSEEEEEESSCCG
T ss_pred ccCCCeeEEeCCCcEEEEEEeC-CCCceEEEEEECCCCCEEEEEEEeCCCcccCCCccceEEEEecCCCEEEEEEecCCc
Confidence 4456667899999999999984 356789999853 1110 0124554442111334699999998
Q ss_pred CCCCeEEEEEeeeC
Q psy2442 78 ARDDAVYECVAENG 91 (111)
Q Consensus 78 ~~d~g~y~c~~~~~ 91 (111)
.|+|.|.|.+.+.
T Consensus 82 -~D~G~Y~C~~~~~ 94 (238)
T 1bec_A 82 -SQTSVYFCASGGG 94 (238)
T ss_dssp -GGCEEEEEEEESC
T ss_pred -ccCEEEEEEEecC
Confidence 9999999999886
No 417
>1nez_G T-cell surface glycoprotein CD8 alpha chain; immune system; HET: NAG; 2.10A {Synthetic} SCOP: b.1.1.1 PDB: 1bqh_G* 3b9k_A* 2atp_A* 2arj_R
Probab=98.88 E-value=3.9e-08 Score=50.54 Aligned_cols=80 Identities=14% Similarity=0.334 Sum_probs=55.6
Q ss_pred CCCeeEEcCcceeeecCCcEEEEEEEeccCCCeEEEEEC--Cee------c---cC---------C---CCceEE-EeCC
Q psy2442 9 DPPEITLRPRNQAVKAGGITSFYCIARGDPIPVIQWRKN--GKR------V---SG---------T---QSRYMV-QEFP 64 (111)
Q Consensus 9 ~~p~~~~~~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~--~~~------~---~~---------~---~~~~~~-~~~~ 64 (111)
.++.+.+.+..+.+.+|++++|.|...+.....+.|++. +.. + .. . ..++.. ....
T Consensus 3 ~~~~v~Q~p~~~~v~~G~~vtL~C~~s~~~~~~v~WyrQ~~g~~l~~p~~l~~~~~~~~~~~~~~~~~~~~rfs~~~~~~ 82 (128)
T 1nez_G 3 QAPELRIFPKKMDAELGQKVDLVCEVLGSVSQGCSWLFQNSSSKLPQPTFVVYMASSHNKITWDEKLNSSKLFSAMRDTN 82 (128)
T ss_dssp -CCEEEEESSCEEECTTCCEEEEEEEESCCSSCEEEEEEESSCSSCCCEEEEEECSSSCCEEECTTTTGGGTEEEEEETT
T ss_pred cCCeeEECCCeEEEcCCCCEEEEEEeCccCCCcEEEEEeCCCCCCCCcEEEEEEecccCCceeeccccCCCcEEEEeCCC
Confidence 356677778888899999999999987655567999873 221 1 01 0 134544 3322
Q ss_pred CCCeEEEEccCCCCCCCeEEEEEeee
Q psy2442 65 PGGSLLRIEPVRHARDDAVYECVAEN 90 (111)
Q Consensus 65 ~~~~~l~~~~~~~~~d~g~y~c~~~~ 90 (111)
....|.|..++. +|+|.|.|.+..
T Consensus 83 -~~~~L~I~~~~~-~Dsg~YyCa~~~ 106 (128)
T 1nez_G 83 -NKYVLTLNKFSK-ENEGYYFCSVIS 106 (128)
T ss_dssp -TEEEEEESSCCG-GGCEEEEEEEEE
T ss_pred -CEEEEEECCCCH-HHCEEEEEEEcC
Confidence 334599999998 999999999865
No 418
>3bp6_A Programmed cell death protein 1; PD-1, PD-L2, complex, costimulation, glycoprotein, immunoglo domain, membrane, transmembrane, receptor; 1.60A {Mus musculus} PDB: 3rnk_A 3sbw_A 3bp5_A 1npu_A 3rnq_A
Probab=98.88 E-value=5.3e-08 Score=49.17 Aligned_cols=78 Identities=18% Similarity=0.302 Sum_probs=53.8
Q ss_pred EEcCcceeeecCCcEEEEEEEeccC-CCeEEEEEC--Ceec------------cCCCCceEEEeC-CCCCeEEEEccCCC
Q psy2442 14 TLRPRNQAVKAGGITSFYCIARGDP-IPVIQWRKN--GKRV------------SGTQSRYMVQEF-PPGGSLLRIEPVRH 77 (111)
Q Consensus 14 ~~~~~~~~~~~g~~~~l~c~~~~~~-~~~~~w~~~--~~~~------------~~~~~~~~~~~~-~~~~~~l~~~~~~~ 77 (111)
.+.+..+.+.+|++++|.|...... ...+.|++. +..+ .....|+..... ......|.|.+++.
T Consensus 3 ~q~p~~~~v~~G~~vtL~C~~~~~~~~~~v~Wyrq~~~~~~~~l~~~~~~~~~~~~~~Rf~~~~~~~~~~~~L~I~~~~~ 82 (117)
T 3bp6_A 3 TFYPAWLTVSEGANATFTCSLSNWSEDLMLNWNRLSPSNQTEKQAAFSNGLSQPVQDARFQIIQLPNRHDFHMNILDTRR 82 (117)
T ss_dssp EEECSEEEECTTCCEEEEEEESSCCTTCEEEEEEECTTCCEEEEEEEETTEEEESSCTTEEEEECTTSSEEEEEESSCCG
T ss_pred eecCCcEEEeCCCCEEEEeEeecCCCCCEEEEEEeCCCCCceEEEEECCCCccccccCcEEEEEcCCCCEEEEEECcCCH
Confidence 4556667899999999999987643 458999974 2211 011346655432 22334599999998
Q ss_pred CCCCeEEEEEeeeCC
Q psy2442 78 ARDDAVYECVAENGV 92 (111)
Q Consensus 78 ~~d~g~y~c~~~~~~ 92 (111)
+|+|.|.|.+.+..
T Consensus 83 -~Dsg~Y~C~~~~~~ 96 (117)
T 3bp6_A 83 -NDSGIYLCGAISLH 96 (117)
T ss_dssp -GGCEEEEEEEEECS
T ss_pred -HHCEEEEEEEEecC
Confidence 99999999988743
No 419
>3b5h_A Cervical EMMPRIN, HAB18G/CD147; IG-like domain, cell invasion; 2.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=98.87 E-value=4.2e-08 Score=52.79 Aligned_cols=75 Identities=12% Similarity=0.146 Sum_probs=51.1
Q ss_pred eeeecCCcEEEEEEEeccCCC--eEEEEECCeeccCCCCceEEEeCCCCCeEEEEccCCCCCCCeEEEEEeeeCCCceEe
Q psy2442 20 QAVKAGGITSFYCIARGDPIP--VIQWRKNGKRVSGTQSRYMVQEFPPGGSLLRIEPVRHARDDAVYECVAENGVGDAVS 97 (111)
Q Consensus 20 ~~~~~g~~~~l~c~~~~~~~~--~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~g~y~c~~~~~~~~~~~ 97 (111)
..+.+|+.+.|.|.+.+.+.+ .+.|++++..+.... ... ....|.+. .. .|.|.|.|.+.|.. .
T Consensus 8 ~~v~~G~~v~l~C~~~~~~~p~~~~~W~k~~~~l~~~~-~~~------~~~~l~i~--~~-~d~G~Y~C~~~n~~----~ 73 (184)
T 3b5h_A 8 TVEDLGSKILLTCSLNDSATEVTGHRWLKGGVVLKEDA-LPG------QKTEFKVD--SD-DQWGEYSCVFLPEP----M 73 (184)
T ss_dssp EEEEETTEEEEEEEEESCSSCCCEEEEESSSEEEECTT-CCC------SEEEEEEC--GG-GCCEEEEEEEESTT----S
T ss_pred EEEecCCCEEEEEECCCCCCCceEEEEEeCCEEeeccc-ccC------CcEEEEEe--ch-hhCeEEEEEEECCc----C
Confidence 356789999999999887776 899999988775431 100 12235444 45 89999999999832 2
Q ss_pred eEEEEEEecCC
Q psy2442 98 AEASLTVYEGE 108 (111)
Q Consensus 98 ~~~~l~~~~~~ 108 (111)
....+.|..+|
T Consensus 74 ~~~~l~V~~~P 84 (184)
T 3b5h_A 74 GTANIQLHGPP 84 (184)
T ss_dssp CEEEEEECCSC
T ss_pred cEEEEEEecCC
Confidence 34455555544
No 420
>3qib_D 2B4 beta chain; IG domain, immune system; HET: NAG FUC BMA; 2.70A {Mus musculus}
Probab=98.87 E-value=1e-07 Score=54.38 Aligned_cols=79 Identities=19% Similarity=0.344 Sum_probs=53.8
Q ss_pred CeeEEcCcceeeecCCcEEEEEEEeccCCCeEEEEEC--Ceecc-----CC---------CC-ceEEEeCCCCCeEEEEc
Q psy2442 11 PEITLRPRNQAVKAGGITSFYCIARGDPIPVIQWRKN--GKRVS-----GT---------QS-RYMVQEFPPGGSLLRIE 73 (111)
Q Consensus 11 p~~~~~~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~--~~~~~-----~~---------~~-~~~~~~~~~~~~~l~~~ 73 (111)
..+...+..+.+..|++++|.|...+ +.+.+.|++. +.... .. .. ++...........|.|.
T Consensus 28 ~~v~~~p~~v~v~~G~~v~L~C~~~~-~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~ 106 (270)
T 3qib_D 28 MKVIQTPRYLVKGQGQKAKMRCIPEK-GHPVVFWYQQNKNNEFKFLINFQNQEVLQQIDMTEKRFSAECPSNSPCSLEIQ 106 (270)
T ss_dssp CCCEEECSEEEEETTSCEEEEEECCT-TCCEEEEEEECTTCCEEEEEEEETTEEEEECHHHHHHEEEECCTTSCEEEEES
T ss_pred eeEEeCCCeEEEcCCCCEEEEEEecC-CCceEEEEEECCCCCcEEEEEECCCCceecCCccCCcEEEEeCCCcEEEEEEC
Confidence 34556677788999999999999765 6678999982 11100 00 00 44444322234569999
Q ss_pred cCCCCCCCeEEEEEeeeC
Q psy2442 74 PVRHARDDAVYECVAENG 91 (111)
Q Consensus 74 ~~~~~~d~g~y~c~~~~~ 91 (111)
+++. .|+|.|.|.+.+.
T Consensus 107 ~v~~-~D~G~Y~C~~~~~ 123 (270)
T 3qib_D 107 SSEA-GDSALYLCASSLN 123 (270)
T ss_dssp SCCG-GGCEEEEEEEESC
T ss_pred CCCH-hHCeEEEEEEecC
Confidence 9998 9999999999863
No 421
>3dmm_D T-cell surface glycoprotein CD8 beta chain; T cell CO-receptor CD8AB MHC complex, immune response, membrane, MHC I, phosphoprotein, transmembrane; 2.60A {Mus musculus}
Probab=98.87 E-value=7e-08 Score=50.90 Aligned_cols=80 Identities=18% Similarity=0.331 Sum_probs=54.3
Q ss_pred CeeEEcCcceeeecCCcEEEEEEEecc-CCCeEEEEEC-----Ceecc--------------C--CCCceEEEe-CCCCC
Q psy2442 11 PEITLRPRNQAVKAGGITSFYCIARGD-PIPVIQWRKN-----GKRVS--------------G--TQSRYMVQE-FPPGG 67 (111)
Q Consensus 11 p~~~~~~~~~~~~~g~~~~l~c~~~~~-~~~~~~w~~~-----~~~~~--------------~--~~~~~~~~~-~~~~~ 67 (111)
+.+.+.+..+.+.+|++++|.|...+. ....+.|++. +..+. . ...|+.+.. .....
T Consensus 2 ~~v~Q~p~~~~v~~G~svtL~C~~s~~~~~~~v~Wyrq~~g~~g~~~~~l~~~~~~~~~~~~~~~~~~Rf~~~~~~~~~~ 81 (150)
T 3dmm_D 2 SALIQTPSSLLVQTNHTAKMSCEVKSISKLTSIYWLRERQDPKDKYFEFLASWSSSKGVLYGESVDKKRNIILESSDSRR 81 (150)
T ss_dssp --CEEECSEEEEETTSCEEEEEECCCSSCCCEEEEEEEECCSSCCEEEEEEEEETTTEEEECTTTTTTCCEEEESTTSSS
T ss_pred CccEECCCeEEEeCCCcEEEEEEecCCCCCceEEEEEeCCCCCCCccEEEEEEecCCceEeCCCCccCcEEEEEcCCCCE
Confidence 345566777889999999999998764 4558999975 21110 0 124555542 22234
Q ss_pred eEEEEccCCCCCCCeEEEEEeeeC
Q psy2442 68 SLLRIEPVRHARDDAVYECVAENG 91 (111)
Q Consensus 68 ~~l~~~~~~~~~d~g~y~c~~~~~ 91 (111)
..|.|.+++. +|+|.|.|.+...
T Consensus 82 ~sL~I~~l~~-~Dsg~Y~C~~~~~ 104 (150)
T 3dmm_D 82 PFLSIMNVKP-EDSDFYFCATVGS 104 (150)
T ss_dssp CEEEESSCCG-GGCEEEEEEEECS
T ss_pred EEEEECCCCh-hhCEEEEEEEecC
Confidence 5599999998 9999999998753
No 422
>2otu_A FV light chain variable domain; antibody FV polyglutamine complex, immune system; 1.68A {Mus musculus} PDB: 2otw_A 2gsg_A
Probab=98.87 E-value=8e-08 Score=48.30 Aligned_cols=74 Identities=18% Similarity=0.349 Sum_probs=51.2
Q ss_pred CcceeeecCCcEEEEEEEecc-CCCeEEEEEC--Cee---c---cC---------CCCceEEEeCCCCCeEEEEccCCCC
Q psy2442 17 PRNQAVKAGGITSFYCIARGD-PIPVIQWRKN--GKR---V---SG---------TQSRYMVQEFPPGGSLLRIEPVRHA 78 (111)
Q Consensus 17 ~~~~~~~~g~~~~l~c~~~~~-~~~~~~w~~~--~~~---~---~~---------~~~~~~~~~~~~~~~~l~~~~~~~~ 78 (111)
+..+.+.+|++++|.|...+. +...+.|++. +.. + .. -..|+...... ....|.|.+++.
T Consensus 8 p~~~~~~~G~~v~L~C~~~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~-~~~~L~I~~~~~- 85 (115)
T 2otu_A 8 SSSASFSLGASAKLTCTLSSQHSTYTIEWYQQQPLKPPKYVMELKKDGSHSTGDGIPDRFSGSSSG-ADRYLSISNIQP- 85 (115)
T ss_dssp CCCEECCTTCCEEEEEEECGGGTTCCEEEEEECTTSCCEEEEEECTTSCEEECTTCCTTEEEEEET-TEEEEEESSCCG-
T ss_pred CCCEEECCCCCEEEEEEecCCCCCeEEEEEEeCCCCCceEEEEEecCCceecCcccCCCEEEEccC-CEEEEEECCCCh-
Confidence 556788999999999998765 4568999873 211 1 10 02355444321 334599999998
Q ss_pred CCCeEEEEEeeeCC
Q psy2442 79 RDDAVYECVAENGV 92 (111)
Q Consensus 79 ~d~g~y~c~~~~~~ 92 (111)
+|+|.|.|.+.+..
T Consensus 86 ~Dsg~Y~C~~~~~~ 99 (115)
T 2otu_A 86 EDEAIYICGVGDTI 99 (115)
T ss_dssp GGCEEEEEEEEECC
T ss_pred hHCEEEEEEEecCC
Confidence 99999999987753
No 423
>1f3r_B FV antibody fragment; IG-fold, immuno complex, antibody-antigen, beta-turn, immune system; HET: NLE; NMR {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.1
Probab=98.87 E-value=3.1e-08 Score=56.22 Aligned_cols=75 Identities=19% Similarity=0.333 Sum_probs=52.7
Q ss_pred cceeeecCCcEEEEEEEeccC--CCeEEEEEC--Ceecc---------------CCCCceEEEeC-CCCCeEEEEccCCC
Q psy2442 18 RNQAVKAGGITSFYCIARGDP--IPVIQWRKN--GKRVS---------------GTQSRYMVQEF-PPGGSLLRIEPVRH 77 (111)
Q Consensus 18 ~~~~~~~g~~~~l~c~~~~~~--~~~~~w~~~--~~~~~---------------~~~~~~~~~~~-~~~~~~l~~~~~~~ 77 (111)
..+.+..|++++|.|.+.+.+ .+.+.|++. +..+. ....|+..... ......|.|.++..
T Consensus 8 ~~~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~ 87 (257)
T 1f3r_B 8 GPGLVRPSETLSLTCTVSGFSLTSFSVSWVRHPSGKGPEWMGRMWYDGYTAYNSALKSRLSISRDTSKNQVFLKMNSLQT 87 (257)
T ss_dssp CCSEECTTSEEEEEEEEESSCTTTSCCEEEEEETTSCCEEEEEECSSSCEEECSSSSTTEEEEEETTTTEEEEEEESCCT
T ss_pred CCccccCCceEEEEEEEecccCCCccEEEEEeCCCCCcEEEEEEecCCceeeCcccCCcEEEEEECCCCEEEEEECCCCc
Confidence 345788999999999998875 578999985 21110 01245555432 11334699999998
Q ss_pred CCCCeEEEEEeeeCCC
Q psy2442 78 ARDDAVYECVAENGVG 93 (111)
Q Consensus 78 ~~d~g~y~c~~~~~~~ 93 (111)
.|+|.|.|.+.|..|
T Consensus 88 -~DsG~Y~C~a~n~~g 102 (257)
T 1f3r_B 88 -DDTGTYYCTRDLYGG 102 (257)
T ss_dssp -TCCEEEEEEEESSSS
T ss_pred -ccCEEEEEEEccccc
Confidence 999999999998743
No 424
>2gjj_A A21 single-chain antibody fragment against ERBB2; IG family, SCFV, immune system; 2.10A {Mus musculus} PDB: 3h3b_C
Probab=98.87 E-value=4.9e-08 Score=55.75 Aligned_cols=71 Identities=21% Similarity=0.400 Sum_probs=49.5
Q ss_pred eeeecCCcEEEEEEEeccCC--CeEEEEECC--eecc------C----------CCCceEEEe-CCCCCeEEEEccCCCC
Q psy2442 20 QAVKAGGITSFYCIARGDPI--PVIQWRKNG--KRVS------G----------TQSRYMVQE-FPPGGSLLRIEPVRHA 78 (111)
Q Consensus 20 ~~~~~g~~~~l~c~~~~~~~--~~~~w~~~~--~~~~------~----------~~~~~~~~~-~~~~~~~l~~~~~~~~ 78 (111)
..+..|++++|.|.+.+.+. +.+.|++.. ..+. . ...++.+.. .......|.|.++..
T Consensus 148 ~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~- 226 (264)
T 2gjj_A 148 EVVKTGASVKISCKASGYSFTGYFINWVKKNSGKSPEWIGHISSSYATSTYNQKFKNKAAFTVDTSSSTAFMQLNSLTS- 226 (264)
T ss_dssp EEECTTCCEEEEEEEESSCGGGSEEEEEEECTTSCCEEEEEEETTTCCEEECGGGTTTEEEEEETTTTEEEEEECSCCG-
T ss_pred EEEcCCCcEEEEEEEeCCccCCeEEEEEEECCCCCcEEEEEEeccCcccccCcccCCceEEEEcCCCCEEEEEECcCCc-
Confidence 46889999999999987763 689999863 2110 0 013444332 111335699999998
Q ss_pred CCCeEEEEEeeeC
Q psy2442 79 RDDAVYECVAENG 91 (111)
Q Consensus 79 ~d~g~y~c~~~~~ 91 (111)
.|+|.|.|.+.|.
T Consensus 227 ~DsG~Y~C~a~n~ 239 (264)
T 2gjj_A 227 EDSADYYCVRSGN 239 (264)
T ss_dssp GGCEEEEEEEECS
T ss_pred ccCEEEEEEEecC
Confidence 9999999999984
No 425
>2fbj_H IGA-kappa J539 FAB (heavy chain); immunoglobulin; HET: NAG FUC; 1.95A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mcp_H 2mcp_H*
Probab=98.86 E-value=1.5e-07 Score=52.25 Aligned_cols=75 Identities=21% Similarity=0.411 Sum_probs=52.3
Q ss_pred cceeeecCCcEEEEEEEeccC--CCeEEEEECC--ee---cc-------------CCCCceEEEeCC-CCCeEEEEccCC
Q psy2442 18 RNQAVKAGGITSFYCIARGDP--IPVIQWRKNG--KR---VS-------------GTQSRYMVQEFP-PGGSLLRIEPVR 76 (111)
Q Consensus 18 ~~~~~~~g~~~~l~c~~~~~~--~~~~~w~~~~--~~---~~-------------~~~~~~~~~~~~-~~~~~l~~~~~~ 76 (111)
..+.+..|++++|.|...+.+ .+.+.|++.. .. +. ....|+...... .....|.|.+++
T Consensus 8 ~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~ 87 (220)
T 2fbj_H 8 GGGLVQPGGSLKLSCAASGFDFSKYWMSWVRQAPGKGLEWIGEIHPDSGTINYTPSLKDKFIISRDNAKNSLYLQMSKVR 87 (220)
T ss_dssp CCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEECSSSCEEEEEECSCC
T ss_pred CCeEecCCCcEEEEEEecCccCCCceEEEEEECCCCCeEEEEEEccCCCceecCCccCCcEEEEeeCCCCEEEEEECCCC
Confidence 346888999999999998754 5689998742 11 10 012466555321 123469999999
Q ss_pred CCCCCeEEEEEeeeCCC
Q psy2442 77 HARDDAVYECVAENGVG 93 (111)
Q Consensus 77 ~~~d~g~y~c~~~~~~~ 93 (111)
. .|+|.|.|.+.+..+
T Consensus 88 ~-~DsG~Y~C~~~~~~~ 103 (220)
T 2fbj_H 88 S-EDTALYYCARLHYYG 103 (220)
T ss_dssp G-GGCEEEEEEEEETTT
T ss_pred h-hhCEEEEEEEecccc
Confidence 8 999999999988643
No 426
>1c1e_H Catalytic antibody 1E9 (heavy chain); diels-alder, immunoglobulin, immune system; HET: ENH; 1.90A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1dbb_H* 1dba_H* 1dbj_H* 1dbk_H* 1dbm_H* 2dbl_H* 3ojd_B 1jgl_H* 1jhk_H 1ghf_H 1tet_H* 3e8u_H 1fj1_B 1cl7_H
Probab=98.86 E-value=8.9e-09 Score=56.99 Aligned_cols=89 Identities=12% Similarity=0.236 Sum_probs=52.9
Q ss_pred eEEecCC----CeeEEcCcceeeecCCcEEEEEEEec-cCCC-eEEEEECCeeccCCCCceEEEeCC-CCCeEEEEccCC
Q psy2442 4 KVRFLDP----PEITLRPRNQAVKAGGITSFYCIARG-DPIP-VIQWRKNGKRVSGTQSRYMVQEFP-PGGSLLRIEPVR 76 (111)
Q Consensus 4 ~l~v~~~----p~~~~~~~~~~~~~g~~~~l~c~~~~-~~~~-~~~w~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~ 76 (111)
+|.|... |.+...+....+..|+.+.|.|.+.+ .|.| .+.|++++..+............. .....|.+.. .
T Consensus 114 ~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~g~~~~~~~~~~~~~~~~~~~~s~L~i~~-~ 192 (219)
T 1c1e_H 114 SLTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPS-S 192 (219)
T ss_dssp EEEECCCCCBCCEEEEECCCSSSCCSSEEEEEEEEEEEBSSCCEEEEGGGTBCTTEEECCCEESSSCEEEEEEEEEES-S
T ss_pred EEEEecCCCCCCeEEEecCccccccCCeEEEEEEcccccCCCeEEEEEeCCcccceEecCCcccCCeEEEEEEEEEec-c
Confidence 5566543 44443332234568999999999998 7888 999999887542100000000000 0112367743 3
Q ss_pred CCCCCeEEEEEeeeCCCc
Q psy2442 77 HARDDAVYECVAENGVGD 94 (111)
Q Consensus 77 ~~~d~g~y~c~~~~~~~~ 94 (111)
. .|.|.|.|.+.|..+.
T Consensus 193 ~-~d~g~Y~C~a~n~~~~ 209 (219)
T 1c1e_H 193 P-RPSETVTCNVAHPASS 209 (219)
T ss_dssp S-TTTSCCEEEEEEGGGT
T ss_pred c-CCCCEEEEEEEeCCCC
Confidence 3 4669999999997764
No 427
>1nqb_A Single-chain antibody fragment; multivalent antibody, diabody, domain SWA immunoglobulin; 2.00A {Mus musculus} SCOP: b.1.1.1 b.1.1.1 PDB: 1lmk_A 1qnz_H
Probab=98.86 E-value=7.1e-08 Score=54.81 Aligned_cols=77 Identities=22% Similarity=0.405 Sum_probs=53.8
Q ss_pred cCcceeeecCCcEEEEEEEeccC--CCeEEEEEC--Ceecc----------------CCCCceEEEeC-CCCCeEEEEcc
Q psy2442 16 RPRNQAVKAGGITSFYCIARGDP--IPVIQWRKN--GKRVS----------------GTQSRYMVQEF-PPGGSLLRIEP 74 (111)
Q Consensus 16 ~~~~~~~~~g~~~~l~c~~~~~~--~~~~~w~~~--~~~~~----------------~~~~~~~~~~~-~~~~~~l~~~~ 74 (111)
.+..+.+..|++++|.|.+.+.+ .+.+.|++. +..+. ....|+..... ......|.|.+
T Consensus 6 ~p~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~ 85 (256)
T 1nqb_A 6 QSGAELVKPGASVKLSCKASGYTFTSYWMHWVKQRPGRGLEWIGRIDPNSGGTKYNEKFKSKATLTVDKPSSTAYMQLSS 85 (256)
T ss_dssp ECCCEEECTTCCEEEEEEECSSCGGGSCEEEEEEETTTEEEEEEEECTTTCCEEECGGGTTTEEEEEETTTTEEEEEECS
T ss_pred CCCCeeecCCCcEEEEEEeccccCCCceEEEEEECCCCCcEEEEEEecCCCceeeCcccCCeEEEEEecCCCEEEEEECc
Confidence 34456888999999999998764 568999984 22110 01245554432 11334699999
Q ss_pred CCCCCCCeEEEEEeeeCCC
Q psy2442 75 VRHARDDAVYECVAENGVG 93 (111)
Q Consensus 75 ~~~~~d~g~y~c~~~~~~~ 93 (111)
+.. .|+|.|.|.+.|..|
T Consensus 86 v~~-~DsG~Y~C~~~n~~g 103 (256)
T 1nqb_A 86 LTS-EDSAVYYCARYDYYG 103 (256)
T ss_dssp CCG-GGCEEEEEEECCTTS
T ss_pred CCh-hhCEEEEEEEeeccC
Confidence 998 999999999998754
No 428
>4fqp_A Poliovirus receptor; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA FUC MAN; 3.60A {Homo sapiens} PDB: 1nn8_R 1dgi_R
Probab=98.86 E-value=4.7e-08 Score=56.82 Aligned_cols=94 Identities=17% Similarity=0.221 Sum_probs=58.7
Q ss_pred EEcCcceeeecCCcEEEEEEEeccCCC-----eEEEEECCeecc------------CCCCceEEEeCC----CCCeEEEE
Q psy2442 14 TLRPRNQAVKAGGITSFYCIARGDPIP-----VIQWRKNGKRVS------------GTQSRYMVQEFP----PGGSLLRI 72 (111)
Q Consensus 14 ~~~~~~~~~~~g~~~~l~c~~~~~~~~-----~~~w~~~~~~~~------------~~~~~~~~~~~~----~~~~~l~~ 72 (111)
...|..+.+..|++++|.|.+.+.+.+ .+.|++++.... ....++...... .....|.|
T Consensus 4 v~~P~~v~~~~G~~v~L~C~v~~~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~sL~I 83 (313)
T 4fqp_A 4 VQAPTQVPGFLGDSVTLPCYLQVPNMEVTHVSQLTWARHGESGSMAVFHQTQGPSYSESKRLEFVAARLGAELRNASLRM 83 (313)
T ss_dssp EECCSEECCBTTSCEEECCEEECCTTSCCCCCEEEEEETTSSSCSEEEETTTEEEESSTTTEEESSCCTTSCCCBCCEEE
T ss_pred EcCCCEEEEecCCCEEEEEEEECCCCCccceEEEEEEECCCCcceEEEecCCCceeccCcceEEEeeccCCcccceEEEE
Confidence 345566778899999999999876655 388999865321 111222221110 01234999
Q ss_pred ccCCCCCCCeEEEEEeeeCCCceEeeEEEEEEecCC
Q psy2442 73 EPVRHARDDAVYECVAENGVGDAVSAEASLTVYEGE 108 (111)
Q Consensus 73 ~~~~~~~d~g~y~c~~~~~~~~~~~~~~~l~~~~~~ 108 (111)
.++.. .|+|.|.|.+.+..+......+.|.+...|
T Consensus 84 ~~v~~-~D~G~Y~C~v~~~~~~~~~~~~~l~v~~~P 118 (313)
T 4fqp_A 84 FGLRV-EDEGNYTCLFVTFPQGSRSVDIWLRVLAKP 118 (313)
T ss_dssp CSCCG-GGCEEEEEEEECSSSCEEEEEEEECCBBCC
T ss_pred CcCCh-hhCEEEEEEEeeccCcceeeeeeeeeccCC
Confidence 99998 999999998865433223555555554443
No 429
>1hkf_A NKP44, NK cell activating receptor; natural cytotoxicity receptor, immunoglobulin domain; 2.2A {Homo sapiens} SCOP: b.1.1.1
Probab=98.85 E-value=2e-07 Score=47.45 Aligned_cols=77 Identities=18% Similarity=0.224 Sum_probs=51.9
Q ss_pred EcCcceeeecCCcEEEEEEEeccC--CCeEEEEECCe-----e-cc-------CCCCceEEEe-CCCCCeEEEEccCCCC
Q psy2442 15 LRPRNQAVKAGGITSFYCIARGDP--IPVIQWRKNGK-----R-VS-------GTQSRYMVQE-FPPGGSLLRIEPVRHA 78 (111)
Q Consensus 15 ~~~~~~~~~~g~~~~l~c~~~~~~--~~~~~w~~~~~-----~-~~-------~~~~~~~~~~-~~~~~~~l~~~~~~~~ 78 (111)
..+..+.+.+|++++|.|...... ...+.|++... . +. ....|+.+.. .......|.|.+++.
T Consensus 15 ~~~~~v~~~~G~svtL~C~~s~~~~~~~~v~W~rq~~~~~~~~li~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~l~~- 93 (122)
T 1hkf_A 15 SKAQVLQSVAGQTLTVRCQYPPTGSLYEKKGWCKEASALVCIRLVTSSKPRTMAWTSRFTIWDDPDAGFFTVTMTDLRE- 93 (122)
T ss_dssp CCCEEEEECTTCCEEEEEECCCCTTCCCEEEEEEEEETTEEEEEEEECSTTCCBCSTTEEEEEETTTTEEEEEECSCCG-
T ss_pred cCCceEEEecCCCEEEEeEccCCCCcccEEEEEcCCCCCCceEEEEeCCeEeEeecCcEEEEEcCcCCEEEEEEeCCCH-
Confidence 445557888999999999976532 24789987531 1 11 1124665532 222334599999998
Q ss_pred CCCeEEEEEeeeCC
Q psy2442 79 RDDAVYECVAENGV 92 (111)
Q Consensus 79 ~d~g~y~c~~~~~~ 92 (111)
+|+|.|.|.+....
T Consensus 94 ~Dsg~Y~C~v~~~~ 107 (122)
T 1hkf_A 94 EDSGHYWCRIYRPS 107 (122)
T ss_dssp GGCEEEEEEEECTT
T ss_pred HHCEEEEEEEEcCC
Confidence 99999999988754
No 430
>4fom_A Poliovirus receptor-related protein 3; immunoglobulin-like domain, IG domain, cell adhesion; HET: NAG BMA MAN FUC; 3.93A {Homo sapiens}
Probab=98.85 E-value=2.7e-08 Score=57.59 Aligned_cols=88 Identities=18% Similarity=0.274 Sum_probs=54.6
Q ss_pred ceeeecCCcEEEEEEEeccC-CCeEEEEECCeecc----------------CCCCceEEEeCCCCCeEEEEccCCCCCCC
Q psy2442 19 NQAVKAGGITSFYCIARGDP-IPVIQWRKNGKRVS----------------GTQSRYMVQEFPPGGSLLRIEPVRHARDD 81 (111)
Q Consensus 19 ~~~~~~g~~~~l~c~~~~~~-~~~~~w~~~~~~~~----------------~~~~~~~~~~~~~~~~~l~~~~~~~~~d~ 81 (111)
.+.+..|++++|.|.+.+.+ .+.+.|++.+.... ....++...........|.|.++.. .|+
T Consensus 8 ~vtv~~G~~v~L~C~v~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~~v~~-~D~ 86 (308)
T 4fom_A 8 HVTAVWGKNVSLKCLIEVNETITQISWEKIHGKSSQTVAVHHPQYGFSVQGEYQGRVLFKNYSLNDATITLHNIGF-SDS 86 (308)
T ss_dssp SCEEETTSCEEECCBCCCSSCEEEEEEEEESSSCEEEEEEECSSSCEEECTTTTTTEEESCCSSSBCCEEECSCCG-GGC
T ss_pred EeEEEcCCcEEEEEEecCCCCCcEEEEEECCCCCCceEEEecCCCCceecCcccceEEeeccCCCceEEEEccCCH-HHC
Confidence 46788999999999876543 34689998543211 0012222221111224499999998 999
Q ss_pred eEEEEEeeeCCCceEeeEEEEEEecC
Q psy2442 82 AVYECVAENGVGDAVSAEASLTVYEG 107 (111)
Q Consensus 82 g~y~c~~~~~~~~~~~~~~~l~~~~~ 107 (111)
|.|.|.+.|..+........+.+...
T Consensus 87 G~Y~C~a~n~~~~~~~~~~~~~v~~~ 112 (308)
T 4fom_A 87 GKYICKAVTFPLGNAQSSTTVTVLVE 112 (308)
T ss_dssp EEEEEEEEETTTEEEEEEEEEEEEBC
T ss_pred EEEEEEEeeCCCcceeeeeEEEeeec
Confidence 99999998864332355555555443
No 431
>3uzq_A Anti-dengue MAB 4E11; dengue antibody neutralization, immune system; HET: MES; 1.60A {Mus musculus} PDB: 3uze_A* 3uyp_A* 3uzv_B 1dzb_A
Probab=98.85 E-value=6.5e-08 Score=54.72 Aligned_cols=90 Identities=19% Similarity=0.219 Sum_probs=57.2
Q ss_pred EcCcceeeecCCcEEEEEEEeccC--CCeEEEEEC--Ceec----------------cCCCCceEEEeCC-CCCeEEEEc
Q psy2442 15 LRPRNQAVKAGGITSFYCIARGDP--IPVIQWRKN--GKRV----------------SGTQSRYMVQEFP-PGGSLLRIE 73 (111)
Q Consensus 15 ~~~~~~~~~~g~~~~l~c~~~~~~--~~~~~w~~~--~~~~----------------~~~~~~~~~~~~~-~~~~~l~~~ 73 (111)
..+..+.+..|++++|.|.+.+.+ .+.+.|++. +..+ .....++...... .....|.|.
T Consensus 6 ~~p~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~ 85 (253)
T 3uzq_A 6 EQSGAELVKPGASVRLSCTASGFNIKDTYMSWVKQRPEQGLEWIGRIDPANGDTKYDPKFQGKATITADTSSNTAYLHLS 85 (253)
T ss_dssp EECCCEEECTTCCEEEEEEECSSCGGGSCEEEEEECTTCCEEEEEEEETTTTEEEECGGGTTTEEEEEETTTTEEEEEEC
T ss_pred ecCCCeeecCCCcEEEEEEeeCCcccCceEEEEEeCCCCCCEEEEEEccCCCcceeCCcCCCcEEEEeecCCCeEEEEeC
Confidence 445567888999999999988743 668999982 1111 0011345444221 123449999
Q ss_pred cCCCCCCCeEEEEEeeeCCCceEeeEEEEEEe
Q psy2442 74 PVRHARDDAVYECVAENGVGDAVSAEASLTVY 105 (111)
Q Consensus 74 ~~~~~~d~g~y~c~~~~~~~~~~~~~~~l~~~ 105 (111)
++.. .|+|.|.|.+.|..+........+.|.
T Consensus 86 ~v~~-~DsG~Y~C~~~~~~~~~~~~~~~l~V~ 116 (253)
T 3uzq_A 86 SLTS-GDTAVYYCSRGWEGFAYWGQGTLVTVS 116 (253)
T ss_dssp SCCG-GGCEEEEEEECSSSCCEECCCEEEEEC
T ss_pred CCCc-ccCEEEEEEEeeCCccEECCCcEEEEe
Confidence 9998 999999999988544322233444444
No 432
>2yz1_A Tyrosine-protein phosphatase non-receptor type substrate 1; beta-sandwich, structural genomics, NPPSFA; 1.40A {Mus musculus}
Probab=98.84 E-value=2.8e-08 Score=50.28 Aligned_cols=80 Identities=23% Similarity=0.293 Sum_probs=52.0
Q ss_pred eeEEcCcceeeecCCcEEEEEEEecc-CCCeEEEEECCee----ccC-C---CCceEEE----eCCCCCeEEEEccCCCC
Q psy2442 12 EITLRPRNQAVKAGGITSFYCIARGD-PIPVIQWRKNGKR----VSG-T---QSRYMVQ----EFPPGGSLLRIEPVRHA 78 (111)
Q Consensus 12 ~~~~~~~~~~~~~g~~~~l~c~~~~~-~~~~~~w~~~~~~----~~~-~---~~~~~~~----~~~~~~~~l~~~~~~~~ 78 (111)
.+.+.+..+.+..|++++|.|...+. +.+.+.|++.+.. +.. . ..++... ........|.|.+++.
T Consensus 9 ~v~q~p~~~~~~~G~~v~L~C~~~~~~~~~~v~W~r~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~~~~L~I~~v~~- 87 (120)
T 2yz1_A 9 KVTQPEKSVSVAAGDSTVLNCTLTSLLPVGPIKWYRGVGQSRLLIYSFTGEHFPRVTNVSDATKRNNMDFSIRISNVTP- 87 (120)
T ss_dssp CEECCSSEEEECTTCCEEECCEESCCCSCCCEEEEESSSTTCEEEEEECEECTTTCCSEEECCBSSTTBCCEEECSCCG-
T ss_pred EEECCCceEEEeCCCCEEEEeEECCCCCCcEEEEEcCCCCCcEEEEEcCCcccCcccceeeccccCCCeEEEEECCCCH-
Confidence 34455666788999999999998765 4568999997521 100 0 0111111 0011224599999998
Q ss_pred CCCeEEEEEeeeCC
Q psy2442 79 RDDAVYECVAENGV 92 (111)
Q Consensus 79 ~d~g~y~c~~~~~~ 92 (111)
+|+|.|.|.+.+..
T Consensus 88 ~DsG~Y~C~~~~~~ 101 (120)
T 2yz1_A 88 EDAGTYYCVKFQKG 101 (120)
T ss_dssp GGCEEEEEEEEECC
T ss_pred HHCEEEEEEEEcCC
Confidence 99999999988753
No 433
>1x9q_A SCFV, 4M5.3 anti-fluorescein single chain antibody fragment; VERY high affinity, antibody binding, electrostatics, directed evolution; HET: FLU; 1.50A {Homo sapiens}
Probab=98.83 E-value=7.9e-08 Score=54.87 Aligned_cols=74 Identities=18% Similarity=0.424 Sum_probs=50.3
Q ss_pred CcceeeecCCcEEEEEEEeccCC--CeEEEEEC--Ceec------------------cCCCCceEEEeCC-CCCeEEEEc
Q psy2442 17 PRNQAVKAGGITSFYCIARGDPI--PVIQWRKN--GKRV------------------SGTQSRYMVQEFP-PGGSLLRIE 73 (111)
Q Consensus 17 ~~~~~~~~g~~~~l~c~~~~~~~--~~~~w~~~--~~~~------------------~~~~~~~~~~~~~-~~~~~l~~~ 73 (111)
+....+..|++++|.|...+.+. +.+.|++. +..+ .....++...... .....|.|.
T Consensus 158 ~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~ 237 (268)
T 1x9q_A 158 TGGGLVQPGGAMKLSCVTSGFTFGHYWMNWVRQSPEKGLEWVAQFRNKPYNYETYYSDSVKGRFTISRDDSKSSVYLQMN 237 (268)
T ss_dssp ECCEEECTTCCEEEEEEEESSCGGGCEEEEEEEETTTEEEEEEEECCGGGTTCEEECTTTTTTEEEEEEGGGTEEEEEEC
T ss_pred CCceEecCCCcEEEEEEecCccccccEEEEEEeCCCCCcEEEEEEcccccccccccCCccCCeEEEEEeCCCCEEEEEEC
Confidence 34457889999999999987653 68999874 2211 0112355443211 123459999
Q ss_pred cCCCCCCCeEEEEEeeeC
Q psy2442 74 PVRHARDDAVYECVAENG 91 (111)
Q Consensus 74 ~~~~~~d~g~y~c~~~~~ 91 (111)
++.. .|+|.|.|.+.+.
T Consensus 238 ~v~~-~DsG~Y~C~a~~~ 254 (268)
T 1x9q_A 238 NLRV-EDTGIYYCTGASY 254 (268)
T ss_dssp SCCG-GGCEEEEEEEEET
T ss_pred CCCH-HHCEEEEEEEccC
Confidence 9998 9999999999874
No 434
>1qgc_4 Protein (immunoglobulin); virus-antibody complex, icosahedral virus, virus-immune SYST complex; 30.00A {Mus musculus} SCOP: i.6.1.1
Probab=98.83 E-value=6.9e-08 Score=58.38 Aligned_cols=75 Identities=24% Similarity=0.445 Sum_probs=52.9
Q ss_pred cCcceeeecCCcEEEEEEEeccC--CCeEEEEEC--Ceecc----------------CCCCceEEEeCC-CCCeEEEEcc
Q psy2442 16 RPRNQAVKAGGITSFYCIARGDP--IPVIQWRKN--GKRVS----------------GTQSRYMVQEFP-PGGSLLRIEP 74 (111)
Q Consensus 16 ~~~~~~~~~g~~~~l~c~~~~~~--~~~~~w~~~--~~~~~----------------~~~~~~~~~~~~-~~~~~l~~~~ 74 (111)
.+....+..|+.+.|.|.+.+.| .+.+.|+++ +..+. ....++...... .....|.|.+
T Consensus 224 ~~~~~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~ 303 (438)
T 1qgc_4 224 ESGGGLVKPGGSLKLSCTASGFIFNRCAMSWVRQTPEKRLEWVATISSGGTYTYYPDSVKGRFTISRDNAKNTLYLQMSS 303 (438)
T ss_dssp EECCEEECTTCCEEEEEEEESSCGGGSCEEEEEEETTTEEEEEEEECTTSCCEECCGGGTTTEEEEEETTTTEEEEEECS
T ss_pred cCCceEEecCCcEEEEEEEcccccCCcEEEEEECCCCCCcEEEEEEeecCCceecCcccCCcEEEEeecCCCeEEEEECC
Confidence 34456788999999999999877 568999985 33221 012455444321 1234599999
Q ss_pred CCCCCCCeEEEEEeeeC
Q psy2442 75 VRHARDDAVYECVAENG 91 (111)
Q Consensus 75 ~~~~~d~g~y~c~~~~~ 91 (111)
+.. .|.|.|.|.+.|.
T Consensus 304 v~~-~D~G~Y~C~a~n~ 319 (438)
T 1qgc_4 304 LRS-ADTAMYYCVRRED 319 (438)
T ss_dssp CCG-GGCCEEEEEECCS
T ss_pred CCh-hhCEEEEEEEEcc
Confidence 998 9999999999983
No 435
>1q9r_B S25-2 FAB (IGG1K) heavy chain; antigen-binding fragment, anti-carbohydrate, anti-LPS, antibody, immunoglobulin, KDO, complex, immune system; HET: KDA KDO; 1.45A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q9l_B 1q9k_B* 1q9q_B* 1q9v_B* 2r1w_B* 2r1x_B* 2r1y_B* 2r2b_B* 2r2e_B* 2r2h_B* 3bpc_B* 3sy0_B* 3t4y_B* 3t65_B* 2r23_B* 1q9t_B* 3t77_B* 3okl_B* 3okk_B* 3okm_B ...
Probab=98.83 E-value=1.2e-07 Score=52.50 Aligned_cols=74 Identities=19% Similarity=0.374 Sum_probs=51.3
Q ss_pred cceeeecCCcEEEEEEEeccC--CCeEEEEECC--eecc------------------CCCCceEEEeCC-CCCeEEEEcc
Q psy2442 18 RNQAVKAGGITSFYCIARGDP--IPVIQWRKNG--KRVS------------------GTQSRYMVQEFP-PGGSLLRIEP 74 (111)
Q Consensus 18 ~~~~~~~g~~~~l~c~~~~~~--~~~~~w~~~~--~~~~------------------~~~~~~~~~~~~-~~~~~l~~~~ 74 (111)
..+.+..|++++|.|...+.+ .+.+.|++.. ..+. ....|+...... .....|.|.+
T Consensus 8 ~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~ 87 (222)
T 1q9r_B 8 GGGLVQSGGSLRLSCATSGFTFTDYYMSWVRQPPGKALEWLGFIRNKANGYTTEYSPSVKGRFTISRDNSQSILYLQMNT 87 (222)
T ss_dssp CCCEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEECCGGGTTCEEECTTTBTTEEEEEETTTTEEEEEECS
T ss_pred CceeEcCCCEEEEEEEecCccCCCCcEEEEEECCCCCcEEEEEEccCCcccccccCcccCCceEEEEECCCCeEEEEECc
Confidence 346788999999999998754 5689999742 1100 012455544321 1234699999
Q ss_pred CCCCCCCeEEEEEeeeCC
Q psy2442 75 VRHARDDAVYECVAENGV 92 (111)
Q Consensus 75 ~~~~~d~g~y~c~~~~~~ 92 (111)
+.. .|+|.|.|.+.+..
T Consensus 88 v~~-~D~G~Y~C~~~~~~ 104 (222)
T 1q9r_B 88 LRA-EDSATYYCARDHDG 104 (222)
T ss_dssp CCG-GGCEEEEEEECCCS
T ss_pred CCc-ccCeEEEEEEeccC
Confidence 998 99999999998854
No 436
>3dmm_C T-cell surface glycoprotein CD8 alpha chain; T cell CO-receptor CD8AB MHC complex, immune response, membrane, MHC I, phosphoprotein, transmembrane; 2.60A {Mus musculus}
Probab=98.83 E-value=1.3e-07 Score=50.71 Aligned_cols=82 Identities=12% Similarity=0.279 Sum_probs=56.2
Q ss_pred CCCeeEEcCcceeeecCCcEEEEEEEeccCCCeEEEEEC--Ce---ec------cC------------CCCceEEEeCCC
Q psy2442 9 DPPEITLRPRNQAVKAGGITSFYCIARGDPIPVIQWRKN--GK---RV------SG------------TQSRYMVQEFPP 65 (111)
Q Consensus 9 ~~p~~~~~~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~--~~---~~------~~------------~~~~~~~~~~~~ 65 (111)
....+.+.+..+.+..|++++|.|.........+.|++. +. .+ .. ...++.......
T Consensus 8 gs~~v~Q~P~~v~v~~G~sVtL~C~~s~~~~~~v~WyrQ~pg~~~~~p~~Li~~~~~~~~~~y~~~~~~~~Rfs~s~~~~ 87 (166)
T 3dmm_C 8 QAPELRIFPKKMDAELGQKVDLVCEVLGSVSQGCSWLFQNSSSKLPQPTFVVYMASSHNKITWDEKLNSSKLFSAMRDTN 87 (166)
T ss_dssp -CCEEEEECSCBCCCTTCCEEEEEEEESSSCCEEEEEEEETTCSCCSCEEEEEEESSSCCEEECGGGSSCCSEEEECSTT
T ss_pred CCccEEEeCCeEEEcCCCCEEEEEEEeCCCCceEEEEEECCCCCCCCcEEEEEEeCCCCceeeccccccccceEEEcCCC
Confidence 345667777778899999999999987545568999863 22 11 00 123455443332
Q ss_pred CCeEEEEccCCCCCCCeEEEEEeeeC
Q psy2442 66 GGSLLRIEPVRHARDDAVYECVAENG 91 (111)
Q Consensus 66 ~~~~l~~~~~~~~~d~g~y~c~~~~~ 91 (111)
....|.|.+++. +|+|.|.|.+...
T Consensus 88 ~~~sL~I~~vq~-eDsG~YyCa~~~~ 112 (166)
T 3dmm_C 88 NKYVLTLNKFSK-ENEGYYFCSVISN 112 (166)
T ss_dssp TEEEEEESSCCT-TTCEEEEEEEESS
T ss_pred CEEEEEECCCCh-hhCEEEEEEECCC
Confidence 225599999998 9999999998753
No 437
>2h32_A Immunoglobulin IOTA chain; beta sheets, V and C-type IG folds, immune system; 2.70A {Homo sapiens}
Probab=98.82 E-value=2.9e-08 Score=50.86 Aligned_cols=77 Identities=17% Similarity=0.334 Sum_probs=51.3
Q ss_pred CcceeeecCCcEEEEEEEecc---CCCeEEEEECC--e---ec-c---C--------CCCceEEEeC-CCCCeEEEEccC
Q psy2442 17 PRNQAVKAGGITSFYCIARGD---PIPVIQWRKNG--K---RV-S---G--------TQSRYMVQEF-PPGGSLLRIEPV 75 (111)
Q Consensus 17 ~~~~~~~~g~~~~l~c~~~~~---~~~~~~w~~~~--~---~~-~---~--------~~~~~~~~~~-~~~~~~l~~~~~ 75 (111)
+..+.+..|++++|.|..... ....+.|++.. . .+ . . ...|+..... ......|.|.++
T Consensus 7 p~~v~v~~G~~vtL~C~~s~~~~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~~~~~Rf~~~~~~~~~~~sL~I~~~ 86 (126)
T 2h32_A 7 PPAMSSALGTTIRLTCTLRNDHDIGVYSVYWYQQRPGHPPRFLLRYFSQSDKSQGPQVPPRFSGSKDVARNRGYLSISEL 86 (126)
T ss_dssp CSEEEEETTCCEEEEEEECTTSCGGGCEEEEEEECTTSCCEEEEEEEETTEEEECTTCCTTEEEEEEGGGTEEEEEECSC
T ss_pred CCCEEECCCCCEEEEEEecCCCccccceEEEEEECCCCCCEEEEEEECCCCEEeCCCCCCCEEEEEeCCCCeEEEEECCC
Confidence 345688999999999998764 24579998742 1 11 0 0 0235554421 112345999999
Q ss_pred CCCCCCeEEEEEeeeCCCc
Q psy2442 76 RHARDDAVYECVAENGVGD 94 (111)
Q Consensus 76 ~~~~d~g~y~c~~~~~~~~ 94 (111)
+. +|+|.|.|.+.+..+.
T Consensus 87 ~~-~DsG~Y~C~~~~~~~~ 104 (126)
T 2h32_A 87 QP-EDEAMYYCAMGARSSE 104 (126)
T ss_dssp CG-GGCEEEEEEEECSCCC
T ss_pred Ch-hHCEEEEEEEEcCCCC
Confidence 98 9999999998876543
No 438
>2or7_A T-cell immunoglobulin and mucin domain- containing protein 2; beta barrel, immunoglobulin fold, IGV domain, TIM, immune system; 1.50A {Mus musculus}
Probab=98.82 E-value=2.8e-08 Score=49.96 Aligned_cols=89 Identities=22% Similarity=0.192 Sum_probs=55.7
Q ss_pred CcceeeecCCcEEEEEEEecc--CCCeEEEEECCe-------ec-c--------CCCCceEEEeC-CCCCeEEEEccCCC
Q psy2442 17 PRNQAVKAGGITSFYCIARGD--PIPVIQWRKNGK-------RV-S--------GTQSRYMVQEF-PPGGSLLRIEPVRH 77 (111)
Q Consensus 17 ~~~~~~~~g~~~~l~c~~~~~--~~~~~~w~~~~~-------~~-~--------~~~~~~~~~~~-~~~~~~l~~~~~~~ 77 (111)
+..+.+..|++++|.|..... ....+.|++... .+ . ....++.+... ......|.|.+++.
T Consensus 4 p~~v~~~~G~~v~L~C~~~~~~~~~~~v~W~~~~~~~~~~~~~~i~~~~~~~~~~~~~r~~~~~~~~~~~~sL~I~~v~~ 83 (115)
T 2or7_A 4 HTAVQGLAGHPVTLPCIYSTHLGGIVPMCWGLGECRHSYCIRSLIWTNGYTVTHQRNSRYQLKGNISEGNVSLTIENTVV 83 (115)
T ss_dssp --CEEEETTSCEEECCBCCHHHHCSCCEEEEESCHHHHTTTTEEEEECSSSEEEESSTTEECCSCGGGTBCCEEESSCCG
T ss_pred ccEEEEEcCCCEEEEEEeecCCCCCEEEEEECCCCCcCCCceEEEEeCCeEcccccCccEEEecCccCCeEEEEEccCCH
Confidence 445678899999999997653 245799998741 11 0 01234433211 01223499999998
Q ss_pred CCCCeEEEEEeeeCCCceEeeEEEEEEecC
Q psy2442 78 ARDDAVYECVAENGVGDAVSAEASLTVYEG 107 (111)
Q Consensus 78 ~~d~g~y~c~~~~~~~~~~~~~~~l~~~~~ 107 (111)
+|+|.|.|.+.+..... ...+.|.|...
T Consensus 84 -~DsG~Y~C~v~~~~~~~-~~~v~L~V~~~ 111 (115)
T 2or7_A 84 -GDGGPYCCVVEIPGAFH-FVDYMLEVKPE 111 (115)
T ss_dssp -GGCEEEEEEECCTTSCE-EEEEEEEEESC
T ss_pred -HHCEEEEEEEECCCcee-EEEEEEEEcCC
Confidence 99999999998754432 55666666543
No 439
>4esk_A LAIR-1, mlair1, leukocyte-associated immunoglobulin-like receptor; IG-like domain, domain swapping, collagen receptor, structural genomics; 1.76A {Mus musculus}
Probab=98.82 E-value=1.5e-07 Score=46.53 Aligned_cols=87 Identities=17% Similarity=0.250 Sum_probs=55.4
Q ss_pred CCeeEEcCcceeeecCCcEEEEEEEeccCC----CeEEEEECCeeccCCCCceEEEeCCCCCeEEEEccCCCCCCCeEEE
Q psy2442 10 PPEITLRPRNQAVKAGGITSFYCIARGDPI----PVIQWRKNGKRVSGTQSRYMVQEFPPGGSLLRIEPVRHARDDAVYE 85 (111)
Q Consensus 10 ~p~~~~~~~~~~~~~g~~~~l~c~~~~~~~----~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~g~y~ 85 (111)
+|.+...+. ..+..|+.++|.| ... .. ..+.|++++..... ...........|.|..+.. .|+|.|.
T Consensus 9 kPsL~a~p~-~~v~~G~~VTL~C-~~~-~~~~~~~~f~l~k~g~~~~~-----~~~~~~~~~a~f~i~~vt~-~~aG~Y~ 79 (102)
T 4esk_A 9 DITIFPNSS-LMISQGTFVTVVC-SYS-DKHDLYNMVRLEKDGSTFME-----KSTEPYKTEDEFEIGPVNE-TITGHYS 79 (102)
T ss_dssp EEEEECCSE-EEEETTCCEEEEE-ECT-TTGGGCCEEEEEETTEEEEE-----EECCSSCSEEEEEECSCCG-GGCEEEE
T ss_pred CCEEEEeCC-CcccCCCcEEEEE-CCC-cCCCcccEEEEEECCccccc-----cccCCCCcceEEEeCcCCc-ccCeeEE
Confidence 344444444 3677899999999 643 33 47788888865321 0100011334588999998 9999999
Q ss_pred EEeeeCCC-ceEeeEEEEEEe
Q psy2442 86 CVAENGVG-DAVSAEASLTVY 105 (111)
Q Consensus 86 c~~~~~~~-~~~~~~~~l~~~ 105 (111)
|...+..+ ...+..+.|.|.
T Consensus 80 C~~~~~~~~S~~Sdpl~L~Vt 100 (102)
T 4esk_A 80 CIYSKGITWSERSKTLELKVI 100 (102)
T ss_dssp EEEEETTTEEEECCCEEEEEE
T ss_pred EEEeCCCccccCcCCEEEEEE
Confidence 99887654 223556666654
No 440
>2j6e_L IGM, FAB light chain; autoimmune complex human IGM rheumatoid factor IGG1-FC, immunoglobulin C region, membrane, glycoprotein, transmembrane; HET: NAG FUL BMA MAN NDG GAL; 3.0A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=98.82 E-value=3.4e-09 Score=59.16 Aligned_cols=71 Identities=13% Similarity=0.255 Sum_probs=47.4
Q ss_pred ecCCcEEEEEEEeccCCC--eEEEEECCeeccCCCCceEEEe-CCC---CCeEEEEccCCCCCCCeEEEEEeeeCCCc
Q psy2442 23 KAGGITSFYCIARGDPIP--VIQWRKNGKRVSGTQSRYMVQE-FPP---GGSLLRIEPVRHARDDAVYECVAENGVGD 94 (111)
Q Consensus 23 ~~g~~~~l~c~~~~~~~~--~~~w~~~~~~~~~~~~~~~~~~-~~~---~~~~l~~~~~~~~~d~g~y~c~~~~~~~~ 94 (111)
..|+.++|.|.+.+.+++ .+.|+++|..+........... .++ ....|.+..... .|.|.|.|.+.|..+.
T Consensus 148 ~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~-~d~G~Y~C~a~n~~~~ 224 (234)
T 2j6e_L 148 LQANKATLVCLISDFFPGAVTVAWKADGAPVKAGVETTKPSKQSNNKYAASSYLSLTPEQW-KSHRSYSCQVTHEGST 224 (234)
T ss_dssp HTTSCCCEEECCCBCSSCCCEEEEEETTEECCSSEEECCCCCCTTSCCBCCEEECCCGGGT-TTSCCEEEEEEBTTBC
T ss_pred hcCCceEEEEEEEEEcCCceEEEEEECCEECCCCccccCceECCCCCEEEEEEEEECHHHc-CCCCeEEEEEEeCCCc
Confidence 458899999999885443 8999999988753210000000 000 123477788887 8999999999997654
No 441
>3noi_A Natural cytotoxicity triggering receptor 3; immune system, innate immunity, immunoglobulin-like I2 type natural killer cell activation; HET: 1PG; 1.84A {Homo sapiens} PDB: 3pv6_B*
Probab=98.81 E-value=2.2e-08 Score=50.79 Aligned_cols=75 Identities=21% Similarity=0.313 Sum_probs=51.1
Q ss_pred cCcceeeecCCcEEEEEEEeccC----CCeEEEEECC----eeccC----CCCceEEEeC----CCCCeEEEEccCCCCC
Q psy2442 16 RPRNQAVKAGGITSFYCIARGDP----IPVIQWRKNG----KRVSG----TQSRYMVQEF----PPGGSLLRIEPVRHAR 79 (111)
Q Consensus 16 ~~~~~~~~~g~~~~l~c~~~~~~----~~~~~w~~~~----~~~~~----~~~~~~~~~~----~~~~~~l~~~~~~~~~ 79 (111)
.+..+.+..|++++|.|.....+ ...+.|++.. ..+.. ...++..... ......|.|.+++. +
T Consensus 13 ~p~~v~v~~G~~v~L~C~~~~~~~~~~~~~v~W~r~~~~~g~~~~~~~~~~~~R~~~~~~~~~~~~~~~sL~I~~v~~-~ 91 (120)
T 3noi_A 13 QPPEIRTLEGSSAFLPCSFNASQGRLAIGSVTWFRDEVVPGKEVRNGTPEFRGRLAPLASSRFLHDHQAELHIRDVRG-H 91 (120)
T ss_dssp CCSEEEEETTSCEEECCEECCCTTSCCCEEEEEEESSCSTTCBCCTTCTTTTTCEECCCHHHHHTTCBCCEEESSCCG-G
T ss_pred CCCEEEEEcCCCEEEEeeecCCCCCCceeEEEEEeccCCCCceecccccccCCcEEeecccccccCCcEEEEEecCCh-h
Confidence 45567889999999999987654 3478999875 32221 1234433210 11234599999998 9
Q ss_pred CCeEEEEEeeeC
Q psy2442 80 DDAVYECVAENG 91 (111)
Q Consensus 80 d~g~y~c~~~~~ 91 (111)
|+|.|.|.+...
T Consensus 92 DsG~Y~C~v~~~ 103 (120)
T 3noi_A 92 DASIYVCRVEVL 103 (120)
T ss_dssp GCEEEEEEEEET
T ss_pred hCEEEEEEEEEC
Confidence 999999998753
No 442
>2hp4_A T-cell surface glycoprotein CD8 alpha chain; CO-receptor, soluble protein, KD, protein engineering, immunotherapy, immune-suppressor, immune system; 2.10A {Homo sapiens} PDB: 1akj_D 1cd8_A 3qzw_G 2q3a_A
Probab=98.80 E-value=7.9e-08 Score=48.34 Aligned_cols=77 Identities=14% Similarity=0.283 Sum_probs=52.3
Q ss_pred eEEcCcceeeecCCcEEEEEEEeccC-CCeEEEEEC--Ce----e-c-c--CC---------CCceEEEeCCCCCeEEEE
Q psy2442 13 ITLRPRNQAVKAGGITSFYCIARGDP-IPVIQWRKN--GK----R-V-S--GT---------QSRYMVQEFPPGGSLLRI 72 (111)
Q Consensus 13 ~~~~~~~~~~~~g~~~~l~c~~~~~~-~~~~~w~~~--~~----~-~-~--~~---------~~~~~~~~~~~~~~~l~~ 72 (111)
+.+.+..+.+.+|++++|.|...... ...+.|++. +. . + . .. ..++...... ....|.|
T Consensus 3 ~~q~p~~v~v~~G~~vtL~C~~~~~~~~~~v~Wyrq~~g~~~~~~~l~~~~~~~~~~~~~~~~~rf~~~~~~-~~~~L~I 81 (114)
T 2hp4_A 3 FRVSPLDRTWNLGETVELKCQVLLSNPTSGASWLFQPRGAAASPTFLLYLNQNKPKAAEGLDTQRFSGKRLG-DTFVLTL 81 (114)
T ss_dssp EEEECCSCCCCTTCCEEEEEEECCSSCCSCEEEEEEESSSSCCCEEEEEESSSSCEECTTCCTTTEEEEEET-TEEEEEE
T ss_pred cEeCCCEEEEcCCCCEEEEEEeecCCCCceEEEEEECCCCCCCcEEEEEEcCCCccccCCCCcccEEEEecC-CEEEEEE
Confidence 34566677889999999999987543 457999873 32 1 1 0 00 2355443222 2345999
Q ss_pred ccCCCCCCCeEEEEEeeeC
Q psy2442 73 EPVRHARDDAVYECVAENG 91 (111)
Q Consensus 73 ~~~~~~~d~g~y~c~~~~~ 91 (111)
.+++. +|+|.|.|.+.+.
T Consensus 82 ~~~~~-~Dsg~Y~C~~~~~ 99 (114)
T 2hp4_A 82 SDFRR-ENEGYYFCSALSN 99 (114)
T ss_dssp SSCCG-GGCEEEEEEEEET
T ss_pred CCCCH-HHCEEEEEEEecC
Confidence 99998 9999999998764
No 443
>3bkj_L WO2 IGG2A FAB fragment light chain kappa; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} PDB: 3bkc_L 3bkm_L 2zuq_B* 1h3p_L
Probab=98.80 E-value=2e-08 Score=56.83 Aligned_cols=90 Identities=17% Similarity=0.318 Sum_probs=54.8
Q ss_pred eEEecC---CCeeEEcCcceeeecCCcEEEEEEEecc-CCC-eEEEEECCeeccCC-CCceEEEeCCCC----CeEEEEc
Q psy2442 4 KVRFLD---PPEITLRPRNQAVKAGGITSFYCIARGD-PIP-VIQWRKNGKRVSGT-QSRYMVQEFPPG----GSLLRIE 73 (111)
Q Consensus 4 ~l~v~~---~p~~~~~~~~~~~~~g~~~~l~c~~~~~-~~~-~~~w~~~~~~~~~~-~~~~~~~~~~~~----~~~l~~~ 73 (111)
+|.|.. +|.+...+....+..|+.++|.|.+.+. |.+ .+.|++++..+... ..........+. ...|.+.
T Consensus 141 ~l~V~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~ 220 (252)
T 3bkj_L 141 KLELKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLT 220 (252)
T ss_dssp EEEECCCCBCCEEEEECCCHHHHHHTEEEEEEEEEEEBSSCCEEEEEETTEEECSSEEEEECCCCTTTCCEEEEEEEEEE
T ss_pred EEEEeCCCcCcEEEEeCCChhhcCCCcEEEEEEEeeEeCCCcEEEEEECCeecCCCeeeecCcccCCCCCEEEEEEEEEc
Confidence 455653 4555443322234468899999999884 443 69999999876432 000000000001 1237788
Q ss_pred cCCCCCCCeEEEEEeeeCCCc
Q psy2442 74 PVRHARDDAVYECVAENGVGD 94 (111)
Q Consensus 74 ~~~~~~d~g~y~c~~~~~~~~ 94 (111)
.+.. .|.|.|.|.+.|....
T Consensus 221 ~~~~-~d~g~Y~C~a~n~~~~ 240 (252)
T 3bkj_L 221 KDEY-ERHNSYTCEATHKTST 240 (252)
T ss_dssp HHHH-HHCCEEEEEEECTTCS
T ss_pred chhc-cCCCeEEEEEEeCCCC
Confidence 8877 8999999999997543
No 444
>1ypz_F T-cell receptor gamma chain, beta-2-microglobulin; H2-T22 protein, T cell receptor delta, immune system; HET: NAG MAN FUC; 3.40A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=98.80 E-value=1.9e-07 Score=52.25 Aligned_cols=77 Identities=16% Similarity=0.262 Sum_probs=53.2
Q ss_pred EEcCcceeeecCCcEEEEEEEecc--CCCeEEEEECC--eec----c---C--------CCCceEEEeCCC-CCeEEEEc
Q psy2442 14 TLRPRNQAVKAGGITSFYCIARGD--PIPVIQWRKNG--KRV----S---G--------TQSRYMVQEFPP-GGSLLRIE 73 (111)
Q Consensus 14 ~~~~~~~~~~~g~~~~l~c~~~~~--~~~~~~w~~~~--~~~----~---~--------~~~~~~~~~~~~-~~~~l~~~ 73 (111)
.+.+..+.+..|++++|.|...+. +...+.|++.. ..+ . . ...|+....... ....|.|.
T Consensus 5 ~q~p~~v~~~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~ 84 (230)
T 1ypz_F 5 EQPEISISRPRDETAQISCKVFIESFRSVTIHWYRQKPNQGLEFLLYVLATPTHIFLDKEYKKMEASKNPSASTSILTIY 84 (230)
T ss_dssp ECSCSEEEEETTSCEEEEEEECCGGGGGCCEEEEEECTTTCCEEEEEECSSCCCEEEESSSSEEEEEECCTTTEEEEEEC
T ss_pred cccCCEEEEeCCCcEEEEEEeeccccCccEEEEEEECCCCCCEEEEEEecCCeeecCcccCCeEEEEEcCCCCEEEEEEC
Confidence 445666788999999999998764 45689999742 111 0 0 124555543221 23459999
Q ss_pred cCCCCCCCeEEEEEeeeC
Q psy2442 74 PVRHARDDAVYECVAENG 91 (111)
Q Consensus 74 ~~~~~~d~g~y~c~~~~~ 91 (111)
+++. .|+|.|.|.+.+.
T Consensus 85 ~v~~-~D~G~Y~C~~~~~ 101 (230)
T 1ypz_F 85 SLEE-EDEAIYYCSYGEG 101 (230)
T ss_dssp SCCG-GGCSEEEEEECCT
T ss_pred cCCh-hhCEEEEEEEECC
Confidence 9998 9999999999874
No 445
>3rgv_A YAE62 TCR A chain; TCR, MHC, MHC class I, immune system; 2.90A {Mus musculus} PDB: 3c60_A
Probab=98.80 E-value=1.8e-07 Score=51.61 Aligned_cols=77 Identities=17% Similarity=0.245 Sum_probs=52.7
Q ss_pred eEEcCcceeeecCCcEEEEEEEeccCCCeEEEEEC--Ceecc------C-----CCCceEEEeC-CCCCeEEEEccCCCC
Q psy2442 13 ITLRPRNQAVKAGGITSFYCIARGDPIPVIQWRKN--GKRVS------G-----TQSRYMVQEF-PPGGSLLRIEPVRHA 78 (111)
Q Consensus 13 ~~~~~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~--~~~~~------~-----~~~~~~~~~~-~~~~~~l~~~~~~~~ 78 (111)
+.+.+..+.+.+|++++|.|...+.....+.|++. +..+. . ...|+..... ......|.|.+++.
T Consensus 3 VtQ~p~~v~v~~G~svtL~C~~s~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~Rfs~~~~~~~~~~sL~I~~l~~- 81 (200)
T 3rgv_A 3 VTQMQGQVTLSENDFLFINCTYSTTGYPTLFWYVQYSGEGPQLLLQVTTANNKGSSRGFEATYDKGTTSFHLQKTSVQE- 81 (200)
T ss_dssp EECCCSEEEEETTCCEEECCEEECSSCCEEEEEEECTTSCCEEEEEECSTTCEEEETTEEEECBTTTTBCCEEESSCCS-
T ss_pred cEECCCEEEEeCCCCEEEEEEecCCCCcEEEEEEeCCCCCcEEEEEecCCCCcccCCceEEEECCCCCEEEEEEcCCcC-
Confidence 34556667899999999999987755568999974 22110 0 0235544421 11234499999998
Q ss_pred CCCeEEEEEeee
Q psy2442 79 RDDAVYECVAEN 90 (111)
Q Consensus 79 ~d~g~y~c~~~~ 90 (111)
+|+|.|.|.+..
T Consensus 82 ~DsG~Y~Ca~~~ 93 (200)
T 3rgv_A 82 IDSAVYYCAANS 93 (200)
T ss_dssp TTCEEEEEEEES
T ss_pred ccCCCEEEEecc
Confidence 999999999864
No 446
>2ol3_A BM3.3 T-cell receptor alpha-chain; T cell receptor, class I MHC, H-2KBM8, TCR-PMHC complex, IMM system; HET: NAG; 2.90A {Mus musculus} SCOP: b.1.1.1
Probab=98.80 E-value=4.5e-08 Score=51.16 Aligned_cols=75 Identities=17% Similarity=0.235 Sum_probs=50.2
Q ss_pred EcCcceeeecCCcEEEEEEEeccC-CCeEEEEECC--ee---c---c-CC-----CCceEEEe-CCCCCeEEEEccCCCC
Q psy2442 15 LRPRNQAVKAGGITSFYCIARGDP-IPVIQWRKNG--KR---V---S-GT-----QSRYMVQE-FPPGGSLLRIEPVRHA 78 (111)
Q Consensus 15 ~~~~~~~~~~g~~~~l~c~~~~~~-~~~~~w~~~~--~~---~---~-~~-----~~~~~~~~-~~~~~~~l~~~~~~~~ 78 (111)
+.+..+.+.+|++++|.|...... ...+.|++.. .. + . .. ..|+.... .......|.|.+++.
T Consensus 5 Q~p~~v~v~~G~~vtL~C~~s~~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~~Rfs~~~~~~~~~~sL~I~~~~~- 83 (142)
T 2ol3_A 5 QTQTSISVMEKTTVTMDCVYETQDSSYFLFWYKQTASGEIVFLIRQDSYKKENATVGHYSLNFQKPKSSIGLIITATQI- 83 (142)
T ss_dssp CCCSEEEEETTCCEEECCBCCCCCSSCEEEEEEECTTCCEEEEEEEETTCSSCCEETTEEECCBGGGTBCCEEECSCCT-
T ss_pred ecCCeEEEecCCCEEEEEEecCCcCCceEEEEEeCCCCCcEEEEEECCCCcccccCCCEEEEecCCCCEEEEEECCCCh-
Confidence 445667889999999999976654 3479998742 11 1 0 00 13454421 111234499999998
Q ss_pred CCCeEEEEEeee
Q psy2442 79 RDDAVYECVAEN 90 (111)
Q Consensus 79 ~d~g~y~c~~~~ 90 (111)
+|+|.|.|.+.+
T Consensus 84 ~Dsg~Y~C~~~~ 95 (142)
T 2ol3_A 84 EDSAVYFCAMRG 95 (142)
T ss_dssp TTCEEEEEEEEC
T ss_pred hhCEEEEEEEEc
Confidence 999999999876
No 447
>3eow_R Poliovirus receptor; immunoglobulin super family, alternative splicing, cell adhesion, cell membrane, glycoprotein, HOST-virus interaction; 3.50A {Homo sapiens} PDB: 3uro_R 3epc_R* 3epd_R* 3epf_R*
Probab=98.79 E-value=7e-09 Score=57.48 Aligned_cols=90 Identities=19% Similarity=0.241 Sum_probs=56.8
Q ss_pred CcceeeecCCcEEEEEEEec-cCCC----eEEEEECCeeccC------------CCCceEEEeC----CCCCeEEEEccC
Q psy2442 17 PRNQAVKAGGITSFYCIARG-DPIP----VIQWRKNGKRVSG------------TQSRYMVQEF----PPGGSLLRIEPV 75 (111)
Q Consensus 17 ~~~~~~~~g~~~~l~c~~~~-~~~~----~~~w~~~~~~~~~------------~~~~~~~~~~----~~~~~~l~~~~~ 75 (111)
+..+.+..|+++.|.|...+ .+.+ .+.|++++..... ...++.+... ......|.|.++
T Consensus 6 p~~v~~~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~sL~I~~v 85 (221)
T 3eow_R 6 PTQVPGFLGDSVTLPCYLQVPNMEVTHVSQLTWARHGESGSMAVFHQTQGPSYSESKRLEFVAARLGAELRDASLRMFGL 85 (221)
T ss_dssp CCCCCCCCSSCCEEECCCCCCSSSCCCEEEEEECBSSSCSSCCCEEESSSEEECSCSSCEEESSCSSCCCCCCEEECCCS
T ss_pred CCcEEEEeCCCEEEEeeeccCCCCCccceEEEEEeCCCCceEEEEECCCCCCcCCCCcEEEecccCCCCCCCceEEEccC
Confidence 34467789999999999844 3333 3899988542210 0234444321 112345999999
Q ss_pred CCCCCCeEEEEEeeeCC-CceEeeEEEEEEecCC
Q psy2442 76 RHARDDAVYECVAENGV-GDAVSAEASLTVYEGE 108 (111)
Q Consensus 76 ~~~~d~g~y~c~~~~~~-~~~~~~~~~l~~~~~~ 108 (111)
.. .|+|.|.|.+.+.. +.. ...+.|.|..+|
T Consensus 86 ~~-~D~G~Y~C~~~~~~~~~~-~~~~~L~V~~~P 117 (221)
T 3eow_R 86 RV-EDEGSYTCLFVTFPQGSR-SVDIWLRVLAKP 117 (221)
T ss_dssp SC-CCCSCBEEEEEESSSCSC-EEECCCCCCCCC
T ss_pred Ch-HHCeEEEEEEEeCCCCce-EEEEEEEEEECC
Confidence 98 99999999999865 442 555555554433
No 448
>1c5d_H Monoclonal antibody against the main immunogenic the human muscle acetylcholine receptor...; immunoglobulin, immune system; 2.40A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 2arj_H 3b9k_H* 2gk0_H 2gjz_H 1fn4_B 3mj8_H 3mj9_H*
Probab=98.79 E-value=1.1e-07 Score=52.62 Aligned_cols=75 Identities=21% Similarity=0.414 Sum_probs=51.7
Q ss_pred CcceeeecCCcEEEEEEEeccC--CCeEEEEECC--eecc---------------CCCCceEEEeCC-CCCeEEEEccCC
Q psy2442 17 PRNQAVKAGGITSFYCIARGDP--IPVIQWRKNG--KRVS---------------GTQSRYMVQEFP-PGGSLLRIEPVR 76 (111)
Q Consensus 17 ~~~~~~~~g~~~~l~c~~~~~~--~~~~~w~~~~--~~~~---------------~~~~~~~~~~~~-~~~~~l~~~~~~ 76 (111)
+..+.+..|++++|.|...+.+ .+.+.|++.. ..+. ....|+...... .....|.|.+++
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~ 86 (215)
T 1c5d_H 7 SGPGLVQPSQTLSLTCTVSGFPLTTNGVSWVRQPPGKGLEWIAAISSGGSPYYNSALKSRLSINRDTSKSQVFLKMNSLQ 86 (215)
T ss_dssp ECCCEECTTCCEEEEEEECSSCTTSCCEEEEEECTTSCCEEEEEECTTCCEECCTTTGGGEEEEEETTTTEEEEEESSCC
T ss_pred CCCeeecCCCcEEEEEEECCCcCCCCeEEEEEECCCCCcEEEEEEcCCCCcEECCcccCcEEEEeeCCCceEEEEECCCC
Confidence 4456788999999999998754 4689999752 2110 012455544321 123469999999
Q ss_pred CCCCCeEEEEEeeeCC
Q psy2442 77 HARDDAVYECVAENGV 92 (111)
Q Consensus 77 ~~~d~g~y~c~~~~~~ 92 (111)
. .|+|.|.|.+.+..
T Consensus 87 ~-~D~G~Y~C~~~~~~ 101 (215)
T 1c5d_H 87 T-EDTAIYFCTREDGW 101 (215)
T ss_dssp G-GGCEEEEEEECCSS
T ss_pred c-ccCEEEEEEEecCC
Confidence 8 99999999998853
No 449
>3v2a_R Vascular endothelial growth factor receptor 2; IG-homology domain, vegfr-2, growth factor receptor, VEGF LI hormone-signaling protein complex, angiogenesis; 3.20A {Homo sapiens} PDB: 3v6b_R
Probab=98.79 E-value=1.9e-07 Score=60.06 Aligned_cols=88 Identities=19% Similarity=0.247 Sum_probs=57.7
Q ss_pred cceeeecCCcEEEEEEEecc--CCCeEEEEECCeeccCCCCceEEE-------eCCCCCeEEEEccCCCCCCCeEEEEEe
Q psy2442 18 RNQAVKAGGITSFYCIARGD--PIPVIQWRKNGKRVSGTQSRYMVQ-------EFPPGGSLLRIEPVRHARDDAVYECVA 88 (111)
Q Consensus 18 ~~~~~~~g~~~~l~c~~~~~--~~~~~~w~~~~~~~~~~~~~~~~~-------~~~~~~~~l~~~~~~~~~d~g~y~c~~ 88 (111)
....+..|+.+.|.|.+.+. +.+.+.|++++..+.... ..... ........|.|.++.. .|.|.|.|.+
T Consensus 232 ~~~~v~~G~~v~L~C~~~~~~~~~~~~~W~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~L~i~~v~~-~d~G~Y~C~~ 309 (772)
T 3v2a_R 232 HGIELSVGEKLVLNCTARTELNVGIDFNWEYPSSKHQHKK-LVNRDLKTQSGSEMKKFLSTLTIDGVTR-SDQGLYTCAA 309 (772)
T ss_dssp SCEEEETTCCEEEEEEEEECTTCCCEEEEECC---------CEEEEC-----CCCEEEEEEEEESSCCS-TTCSEEEEEE
T ss_pred CceEEecCCcEEEEEEEecCCCCceeEEEecCCccCCCce-eeeccccccccccceEEEEEEEECcCCc-CCCeEEEEEE
Confidence 33578899999999999874 455899999887653211 11000 0000224589999998 9999999999
Q ss_pred eeCCCceEeeEEEEEEecCC
Q psy2442 89 ENGVGDAVSAEASLTVYEGE 108 (111)
Q Consensus 89 ~~~~~~~~~~~~~l~~~~~~ 108 (111)
.|..+.. ...+.+.|..+|
T Consensus 310 ~~~~~~~-~~~~~l~V~~~p 328 (772)
T 3v2a_R 310 SSGLMTK-KNSTFVRVHEKP 328 (772)
T ss_dssp ECSSCEE-EEEEEEEEECCC
T ss_pred EcCCcce-eEEEEEEEeCCC
Confidence 9987763 677777777665
No 450
>1pz5_B Heavy chain of FAB (SYA/J6); antibody-antigen structure, peptide-carbohydrate mimicry, VA design, immune system; 1.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1m7d_B* 1m71_B* 1m7i_B* 1r24_B 1uz6_F 1uz8_B* 1clz_H*
Probab=98.79 E-value=2.4e-08 Score=55.30 Aligned_cols=89 Identities=13% Similarity=0.237 Sum_probs=55.8
Q ss_pred eeEEecC----CCeeEEcCcceeeecCCcEEEEEEEecc-CCC-eEEEEECCeecc---CC----CCceEEEeCCCCCeE
Q psy2442 3 RKVRFLD----PPEITLRPRNQAVKAGGITSFYCIARGD-PIP-VIQWRKNGKRVS---GT----QSRYMVQEFPPGGSL 69 (111)
Q Consensus 3 ~~l~v~~----~p~~~~~~~~~~~~~g~~~~l~c~~~~~-~~~-~~~w~~~~~~~~---~~----~~~~~~~~~~~~~~~ 69 (111)
++|.|.. +|.+...+....+..|+.+.|.|.+.+. |.| .+.|++++.... .. ...+. ....
T Consensus 114 ~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~~~~~~~~~~~~~~~~~~~~------~~s~ 187 (220)
T 1pz5_B 114 TSVTVSSATTTAPSVYPLVPGCSDTSGSSVTLGCLVKGYFPEPVTVKWNYGALSSGVRTVSSVLQSGFYS------LSSL 187 (220)
T ss_dssp EEEEECSSCCBCCEEEEECCCSCCSCSSSEEEEEEEEEEBSSCCEEEEGGGTCCTTEEECCCEEETTEEE------EEEE
T ss_pred EEEEEccCCCCCCeEEEcccccccCCCCcEEEEEEEEEEeCCCeEEEEecCCcccceEEcCCcccCCeEE------EEEE
Confidence 3555652 3444433322345679999999999987 878 999998776310 00 01111 1234
Q ss_pred EEEccCCCCCCCeEEEEEeeeCCCceEeeEE
Q psy2442 70 LRIEPVRHARDDAVYECVAENGVGDAVSAEA 100 (111)
Q Consensus 70 l~~~~~~~~~d~g~y~c~~~~~~~~~~~~~~ 100 (111)
|.+..... .+ |.|.|.+.|..+.. ...+
T Consensus 188 L~i~~~~~-~~-g~Y~C~a~n~~~~~-~~~~ 215 (220)
T 1pz5_B 188 VTVPSSTW-PS-QTVICNVAHPASKV-DLIK 215 (220)
T ss_dssp EEECGGGT-TT-SCCEEEEEEGGGTE-EEEE
T ss_pred EEEcchhc-CC-ceEEEEEEECCccE-eeee
Confidence 77777765 55 99999999988753 4443
No 451
>2rgs_A I, IG gamma-2B heavy chain; FC-fragment, immunoglobulin, glycosylation, immune system; HET: NAG FUC MAN GAL; 2.13A {Mus musculus}
Probab=98.78 E-value=7.5e-09 Score=57.50 Aligned_cols=84 Identities=17% Similarity=0.129 Sum_probs=54.1
Q ss_pred CCCeeEEcCccee--eecCCcEEEEEEEeccC---C-CeEEEEECCeeccCCCCceEEEeCCC----CCeEEEEccCCCC
Q psy2442 9 DPPEITLRPRNQA--VKAGGITSFYCIARGDP---I-PVIQWRKNGKRVSGTQSRYMVQEFPP----GGSLLRIEPVRHA 78 (111)
Q Consensus 9 ~~p~~~~~~~~~~--~~~g~~~~l~c~~~~~~---~-~~~~w~~~~~~~~~~~~~~~~~~~~~----~~~~l~~~~~~~~ 78 (111)
.+|.+...+.... +..|+++.|.|.+.+.+ . +.+.|++++..+... .......... ....|.|.++..
T Consensus 8 ~~p~v~~~pp~~~~~v~~G~~v~L~C~~~g~~~~p~~~~v~W~k~~~~~~~~-~~~~~~~~~~~~~~~~~~L~I~~~~~- 85 (218)
T 2rgs_A 8 GGPSVFIFPPNIKDVLMISLTPKVTCVVVDVSEDDPDVQISWFVNNVEVHTA-QTQTHREDYNSTIRVVSTLPIQHQDW- 85 (218)
T ss_dssp -CCEEEEECCCHHHHHCTTSCCEEEEEEEEECTTSCCEEEEEEETTEEECCC-EEEEEEETTTTEEEEEEEEECCHHHH-
T ss_pred CCCEEEEECcCHHHhhccCCCeeEEEEEcCCccCCCceEEEEEECCccccCc-ccccccccCCCeEEEEEEEEEcHHHc-
Confidence 3455543343333 77899999999998863 3 689999998776422 1100110000 123488888887
Q ss_pred CCCeEEEEEeeeCCCc
Q psy2442 79 RDDAVYECVAENGVGD 94 (111)
Q Consensus 79 ~d~g~y~c~~~~~~~~ 94 (111)
.|.|.|.|.+.|..+.
T Consensus 86 ~D~g~Y~C~~~~~~~~ 101 (218)
T 2rgs_A 86 MSGKEFKCKVNNKDLP 101 (218)
T ss_dssp HTTCCEEEEEEETTCS
T ss_pred CCCCeEEEEEECCcCC
Confidence 8999999999997653
No 452
>3bqu_C 3H6 FAB light chain; beta sheet, immune system; 3.00A {Mus musculus}
Probab=98.78 E-value=8e-09 Score=57.64 Aligned_cols=83 Identities=16% Similarity=0.281 Sum_probs=45.9
Q ss_pred CCeeEEcCcceeeecCCcEEEEEEEeccCCC--eEEEEECCeeccCC-CCceEEEeCCCC----CeEEEEccCCCCCCCe
Q psy2442 10 PPEITLRPRNQAVKAGGITSFYCIARGDPIP--VIQWRKNGKRVSGT-QSRYMVQEFPPG----GSLLRIEPVRHARDDA 82 (111)
Q Consensus 10 ~p~~~~~~~~~~~~~g~~~~l~c~~~~~~~~--~~~w~~~~~~~~~~-~~~~~~~~~~~~----~~~l~~~~~~~~~d~g 82 (111)
+|.+...+.......|+.++|.|.+.+.+++ .+.|+++|..+... ..........+. ...|.+..... .|.|
T Consensus 134 ~p~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~-~d~g 212 (233)
T 3bqu_C 134 APTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEY-ERHN 212 (233)
T ss_dssp CCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCEEEEEEEC-----CCEEEEECCCCTTTCCEEEEEEEEEEHHHH-HTCC
T ss_pred CCEEEEeCCCHHhhcCCceEEEEEEccccCCceEEEEEECCeeCCCCceEecCCccCCCCCEEEEEEEEECHHHh-CCCC
Confidence 4555443322233468999999999885443 69999998876432 000000000001 12367777776 7899
Q ss_pred EEEEEeeeCCC
Q psy2442 83 VYECVAENGVG 93 (111)
Q Consensus 83 ~y~c~~~~~~~ 93 (111)
.|.|.+.|...
T Consensus 213 ~Y~C~a~n~~~ 223 (233)
T 3bqu_C 213 SYTCEATHKTS 223 (233)
T ss_dssp CEEEEEEEC--
T ss_pred CEEEEEEeCCC
Confidence 99999998643
No 453
>4i0k_A CD276 antigen; immunoglobulin domain, glycoprotein, immunity, adaptive IMMU structural genomics, protein structure initiative; HET: NAG BMA MAN; 2.97A {Mus musculus}
Probab=98.77 E-value=3.8e-09 Score=58.45 Aligned_cols=72 Identities=17% Similarity=0.256 Sum_probs=48.8
Q ss_pred ceeeecCCcEEEEEEEeccCC-----CeEEEEECCeecc------------CCCCceEEEeCC--CCCeEEEEccCCCCC
Q psy2442 19 NQAVKAGGITSFYCIARGDPI-----PVIQWRKNGKRVS------------GTQSRYMVQEFP--PGGSLLRIEPVRHAR 79 (111)
Q Consensus 19 ~~~~~~g~~~~l~c~~~~~~~-----~~~~w~~~~~~~~------------~~~~~~~~~~~~--~~~~~l~~~~~~~~~ 79 (111)
.+.+..|+.+.|.|...+.+. +.+.|++.+.... ....++.+.... .....|.|.++.. .
T Consensus 4 ~v~~~~G~~v~L~C~~~~~~~~~~~~~~v~W~~~~~~~~i~~~~~~~~~~~~~~~r~~~~~~~~~~~~~sL~I~~v~~-~ 82 (222)
T 4i0k_A 4 PVVALVDTDATLRCSFSPEPGFSLAQLNLIWQLTDTKQLVHSFTEGRDQGSAYSNRTALFPDLLVQGNASLRLQRVRV-T 82 (222)
T ss_dssp CCCCCTTSCEEECCBCCCCTTCCTTTEEEEEEETTTCCEEEEEETTEEEEESSCSCEECCTTTGGGTBCCEEECSCCG-G
T ss_pred CEEEECCCCeEEEEEecCCCCCCCCceEEEEEECCCccEEEEEcCCcccccceeCcEEEecccccCCeEEEEECCccc-c
Confidence 456789999999999877653 5789998764320 111233222100 0134499999998 9
Q ss_pred CCeEEEEEeeeC
Q psy2442 80 DDAVYECVAENG 91 (111)
Q Consensus 80 d~g~y~c~~~~~ 91 (111)
|.|.|.|.+.+.
T Consensus 83 D~G~Y~C~~~~~ 94 (222)
T 4i0k_A 83 DEGSYTCFVSIQ 94 (222)
T ss_dssp GCSCEEEEEEEC
T ss_pred cCEEEEEEEEeC
Confidence 999999999875
No 454
>3gkz_A Anti-methamphetamine single chain FV; therapeutic antibody, MDMA, IGG, immune system; HET: B40; 1.90A {Mus musculus} PDB: 3gm0_A* 1rvf_L 3ab0_C 2a0l_C 3iy5_A
Probab=98.77 E-value=2.1e-07 Score=52.70 Aligned_cols=76 Identities=20% Similarity=0.281 Sum_probs=51.6
Q ss_pred EcCcceeeecCCcEEEEEEEecc--CCCeEEEEECC--ee--cc-------------CCCCceEEEeCC-CCCeEEEEcc
Q psy2442 15 LRPRNQAVKAGGITSFYCIARGD--PIPVIQWRKNG--KR--VS-------------GTQSRYMVQEFP-PGGSLLRIEP 74 (111)
Q Consensus 15 ~~~~~~~~~~g~~~~l~c~~~~~--~~~~~~w~~~~--~~--~~-------------~~~~~~~~~~~~-~~~~~l~~~~ 74 (111)
..+..+.+.+|++++|.|.+.+. +.+.+.|++.. .. .. ....++...... .....|.|.+
T Consensus 13 ~~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~ 92 (257)
T 3gkz_A 13 QESGPSLVKPSQTLSLTCSVTGDSVTSGYWSWIRQFPGNKLDYMGYISYRGSTYYNPSLKSRISITRDTSKNQVYLQLKS 92 (257)
T ss_dssp EEECCSEECTTCCEEEEEEEEESCCSSCEEEEEEECTTSCEEEEEEEETTCCEEECTTTTTTEEEEEEGGGTEEEEEECS
T ss_pred ECCCCeEEcCCCcEEEEEEEEcccccceEEEEEEECCCCCcEEEEEEecCCcEEecccccccEEEEEecCCceEEEEECC
Confidence 34455678899999999999884 46789999832 11 00 112344443211 1223599999
Q ss_pred CCCCCCCeEEEEEeeeC
Q psy2442 75 VRHARDDAVYECVAENG 91 (111)
Q Consensus 75 ~~~~~d~g~y~c~~~~~ 91 (111)
+.. .|+|.|.|.+.|.
T Consensus 93 v~~-~DsG~Y~C~~~n~ 108 (257)
T 3gkz_A 93 VSS-EDTATYYCSYFDS 108 (257)
T ss_dssp CCG-GGCEEEEEEEECT
T ss_pred CCh-hhCEEEEEEEecC
Confidence 998 9999999999986
No 455
>3bae_H WO2 IGG2A FAB fragment heavy chain; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} SCOP: b.1.1.2 PDB: 3bkc_H 3bkj_H 3bkm_H 3mck_H 2r0w_H* 2iqa_H 2iq9_H 1ggi_H 1ggb_H 1ggc_H 3eys_H* 2ipt_H 2ipu_H 3eyu_H* 2r0z_H* 3rkd_H 1r0a_H* 1n5y_H* 1n6q_H* 1t03_H* ...
Probab=98.77 E-value=1.1e-07 Score=53.04 Aligned_cols=76 Identities=21% Similarity=0.312 Sum_probs=52.9
Q ss_pred CcceeeecCCcEEEEEEEeccCC----CeEEEEECC--eec----c-----------CCCCceEEEeCC-CCCeEEEEcc
Q psy2442 17 PRNQAVKAGGITSFYCIARGDPI----PVIQWRKNG--KRV----S-----------GTQSRYMVQEFP-PGGSLLRIEP 74 (111)
Q Consensus 17 ~~~~~~~~g~~~~l~c~~~~~~~----~~~~w~~~~--~~~----~-----------~~~~~~~~~~~~-~~~~~l~~~~ 74 (111)
+..+.+..|++++|.|...+.+. +.+.|++.. ..+ . ....|+...... .....|.|.+
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~ 86 (228)
T 3bae_H 7 SGPGLLKPSQTLSLTCSFSGFSIRTSKVGVSWIRQPSGKGLEWLAHIYWDDDKRYNPSLESRLTISKDTSRDMVFMKITS 86 (228)
T ss_dssp ECCSEECTTCCEEEEEEEESSCHHHHCCEEEEEEEETTCCCEEEEEECTTSCEEECTTTGGGEEEEEETTTTEEEEEECS
T ss_pred CCceeecCCCeEEEEEEEeCcccCCCceeEEEEEECCCCCeEEEEEEecCCceeeCcccCCcEEEEEcCCCCeEEEEEcC
Confidence 44567889999999999987664 789998742 211 0 012455554321 1235699999
Q ss_pred CCCCCCCeEEEEEeeeCCC
Q psy2442 75 VRHARDDAVYECVAENGVG 93 (111)
Q Consensus 75 ~~~~~d~g~y~c~~~~~~~ 93 (111)
++. .|+|.|.|.+.+..|
T Consensus 87 v~~-~D~G~Y~C~~~~~~g 104 (228)
T 3bae_H 87 VDT-ADTATYYCARRGFYG 104 (228)
T ss_dssp CCG-GGCEEEEEEEEEEST
T ss_pred CCc-ccCEEEEEEEecCCC
Confidence 998 999999999988643
No 456
>3to4_D NKT vbeta2 (mouse variable domain, human constant; mouse CD1D, mouse NKT, immune system; HET: AGH NAG; 3.10A {Homo sapiens}
Probab=98.76 E-value=2.3e-07 Score=52.55 Aligned_cols=76 Identities=17% Similarity=0.395 Sum_probs=52.1
Q ss_pred EEcCcceeeecCCcEEEEEEEeccCCCeEEEEEC--Ceec------cCC--------CC-ceEEEeCCCCCeEEEEccCC
Q psy2442 14 TLRPRNQAVKAGGITSFYCIARGDPIPVIQWRKN--GKRV------SGT--------QS-RYMVQEFPPGGSLLRIEPVR 76 (111)
Q Consensus 14 ~~~~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~--~~~~------~~~--------~~-~~~~~~~~~~~~~l~~~~~~ 76 (111)
.+.+..+.+..|++++|.|...+.+.+.+.|++. +... ... .. |+...... ... |.|.+++
T Consensus 5 ~q~p~~v~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~-~~~-L~I~~v~ 82 (253)
T 3to4_D 5 EQNPRWRLVPRGQAVNLRCILKNSQYPWMSWYQQDLQKQLQWLFTLRSPGDKEVKSLPGADYLATRVT-DTE-LRLQVAN 82 (253)
T ss_dssp EEECSEEEEESSCCEEEEEECSCTTCCCEEEEEEETTCCEEEEEEECSTTCEEEEEETTEEEEEECCS-SSC-CEEEEES
T ss_pred EeCCCeEEEeCCCcEEEEEEeCCCCcceEEEEEECCCCCcEEEEEECCCcceecCCccCCcEEEEeCC-CCe-EEEccCC
Confidence 3456667889999999999988888889999872 1110 000 01 44443222 222 8999999
Q ss_pred CCCCCeEEEEEeeeCC
Q psy2442 77 HARDDAVYECVAENGV 92 (111)
Q Consensus 77 ~~~d~g~y~c~~~~~~ 92 (111)
. .|+|.|.|.+.+..
T Consensus 83 ~-~DsG~Y~C~~~~~~ 97 (253)
T 3to4_D 83 M-SQGRTLYCTSSADH 97 (253)
T ss_dssp C-SSCEEEEEEEECSC
T ss_pred h-hhCeEEEEEEecCC
Confidence 8 99999999997643
No 457
>1dee_B IGM RF 2A2; FAB-IBP complex 2.7A resolution binding outside the antigen combining site superantigen FAB VH3 specificity; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1hez_B 1adq_H
Probab=98.75 E-value=3e-07 Score=51.15 Aligned_cols=74 Identities=22% Similarity=0.338 Sum_probs=51.5
Q ss_pred cceeeecCCcEEEEEEEeccC--CCeEEEEECC--ee---c-c------------CCCCceEEEeCC-CCCeEEEEccCC
Q psy2442 18 RNQAVKAGGITSFYCIARGDP--IPVIQWRKNG--KR---V-S------------GTQSRYMVQEFP-PGGSLLRIEPVR 76 (111)
Q Consensus 18 ~~~~~~~g~~~~l~c~~~~~~--~~~~~w~~~~--~~---~-~------------~~~~~~~~~~~~-~~~~~l~~~~~~ 76 (111)
..+.+..|++++|.|...+.+ .+.+.|++.. .. + . ....|+...... .....|.|.+++
T Consensus 8 ~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~ 87 (223)
T 1dee_B 8 GGGVVQPGKSLRLSCAASGFTFSGYGMHWVRQAPGKGLEWVALISYDESNKYYADSVKGRFTISRDNSKNTLYLQMNSLR 87 (223)
T ss_dssp CCCEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSCCEEECTTTBTTEEEEEETTTTEEEEEECSCC
T ss_pred CCEEEcCCCcEEEEEEecCcccCCceEEEEEECCCCCcEEEEEEecCCCccccCcccCCeEEEEecCCCCEEEEEECCCC
Confidence 456888999999999988754 3689999742 11 1 0 012455554321 123459999999
Q ss_pred CCCCCeEEEEEeeeCC
Q psy2442 77 HARDDAVYECVAENGV 92 (111)
Q Consensus 77 ~~~d~g~y~c~~~~~~ 92 (111)
. .|+|.|.|.+.+..
T Consensus 88 ~-~D~G~Y~C~~~~~~ 102 (223)
T 1dee_B 88 A-EDTAVYYCAKVKFY 102 (223)
T ss_dssp G-GGCEEEEEEEESSS
T ss_pred H-HHCEEEEEEEeccc
Confidence 8 99999999998864
No 458
>3d9a_H Heavy chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_H 1gpo_H 3ks0_H* 1dqd_H 1ndm_B 1nak_H 1dqq_B 1dqm_H 1dqj_B 1nby_B 1nbz_B 1xgu_B 1ndg_B 1xgt_B 1xgp_B 1xgq_B 1xgr_B 1s5i_H 1f8t_H 1f90_H ...
Probab=98.75 E-value=3.6e-08 Score=54.27 Aligned_cols=88 Identities=14% Similarity=0.251 Sum_probs=54.2
Q ss_pred eEEecC----CCeeEEcCcceeeecCCcEEEEEEEecc-CCC-eEEEEECCeeccCC-CCceEEEeCC-CCCeEEEEccC
Q psy2442 4 KVRFLD----PPEITLRPRNQAVKAGGITSFYCIARGD-PIP-VIQWRKNGKRVSGT-QSRYMVQEFP-PGGSLLRIEPV 75 (111)
Q Consensus 4 ~l~v~~----~p~~~~~~~~~~~~~g~~~~l~c~~~~~-~~~-~~~w~~~~~~~~~~-~~~~~~~~~~-~~~~~l~~~~~ 75 (111)
.|.|.. +|.+...+....+..|+.+.|.|.+.+. |.+ .+.|++++..+... ..... .... .....|.+...
T Consensus 108 ~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~~~~~~~~~~~~~~-~~~~~~~~s~L~i~~~ 186 (210)
T 3d9a_H 108 LVTVSAAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVL-QSDLYTLSSSVTVPSS 186 (210)
T ss_dssp EEEECCCCCBCCEEEEECCTTSCCCSSEEEEEEEEEEEBSSCCEEEEGGGTBCTTEEECCCEE-ETTEEEEEEEEEEEGG
T ss_pred EEEeccCCCCCCEEEEecCCcccccCCcEEEEEEEeeEecCCcEEEEeeCCcccceEEcCCcc-CCCcEEEEEEEEEcHH
Confidence 456653 3444433322345689999999999886 777 99999987753210 01110 0000 01233777777
Q ss_pred CCCCCCeEEEEEeeeCCCc
Q psy2442 76 RHARDDAVYECVAENGVGD 94 (111)
Q Consensus 76 ~~~~d~g~y~c~~~~~~~~ 94 (111)
.. .| |.|.|.+.|..+.
T Consensus 187 ~~-~~-g~Y~C~a~n~~~~ 203 (210)
T 3d9a_H 187 TW-PS-ETVTCNVAHPASS 203 (210)
T ss_dssp GT-TT-SCCEEEEEEGGGT
T ss_pred Hc-CC-CcEEEEEEeCCCC
Confidence 75 56 9999999998765
No 459
>1dn0_B IGM-kappa cold agglutinin (heavy chain); FAB, antibody, human, immune system; 2.28A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1qlr_B* 2j6e_H* 2agj_H* 2h32_H
Probab=98.75 E-value=2.1e-07 Score=52.18 Aligned_cols=73 Identities=21% Similarity=0.252 Sum_probs=50.2
Q ss_pred CcceeeecCCcEEEEEEEeccC--CCeEEEEECC--eecc---------------CCCCceEEEeCC-CCCeEEEEccCC
Q psy2442 17 PRNQAVKAGGITSFYCIARGDP--IPVIQWRKNG--KRVS---------------GTQSRYMVQEFP-PGGSLLRIEPVR 76 (111)
Q Consensus 17 ~~~~~~~~g~~~~l~c~~~~~~--~~~~~w~~~~--~~~~---------------~~~~~~~~~~~~-~~~~~l~~~~~~ 76 (111)
+..+.+..|++++|.|...+.+ .+.+.|++.. ..+. ....|+...... .....|.|.+++
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~ 86 (232)
T 1dn0_B 7 WGAGLLKPSETLSLTCAVYGGSFSDYYWSWIRQPPGKGLEWIGEINHSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVT 86 (232)
T ss_dssp ECCCEECTTSCEEEEEEEESSCCSSCCEEEEEECTTSCCEEEEEECTTCCEEECTTTTTTEEEEEETTTTEEEEEECSCC
T ss_pred CCCEEEeCCCcEEEEEEEccccCCCceEEEEEeCCCCCeEEEEEEecCCceeeCCccCCeEEEEEeCCCCEEEEEECCCC
Confidence 3446788999999999988754 4689999742 1110 012455554321 123469999999
Q ss_pred CCCCCeEEEEEeee
Q psy2442 77 HARDDAVYECVAEN 90 (111)
Q Consensus 77 ~~~d~g~y~c~~~~ 90 (111)
. .|+|.|.|.+.+
T Consensus 87 ~-~D~G~Y~C~~~~ 99 (232)
T 1dn0_B 87 A-ADTAVYYCARPP 99 (232)
T ss_dssp G-GGCEEEEEEECS
T ss_pred c-ccCEEEEEEEec
Confidence 8 999999999973
No 460
>3d9a_H Heavy chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_H 1gpo_H 3ks0_H* 1dqd_H 1ndm_B 1nak_H 1dqq_B 1dqm_H 1dqj_B 1nby_B 1nbz_B 1xgu_B 1ndg_B 1xgt_B 1xgp_B 1xgq_B 1xgr_B 1s5i_H 1f8t_H 1f90_H ...
Probab=98.75 E-value=8.7e-08 Score=52.70 Aligned_cols=75 Identities=24% Similarity=0.389 Sum_probs=51.5
Q ss_pred CcceeeecCCcEEEEEEEeccC--CCeEEEEEC--Ceecc---------------CCCCceEEEeCC-CCCeEEEEccCC
Q psy2442 17 PRNQAVKAGGITSFYCIARGDP--IPVIQWRKN--GKRVS---------------GTQSRYMVQEFP-PGGSLLRIEPVR 76 (111)
Q Consensus 17 ~~~~~~~~g~~~~l~c~~~~~~--~~~~~w~~~--~~~~~---------------~~~~~~~~~~~~-~~~~~l~~~~~~ 76 (111)
+..+.+..|+++.|.|.+.+.+ .+.+.|++. +.... ....|+.+.... .....|.|.++.
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~ 86 (210)
T 3d9a_H 7 SGPSLVKPSQTLSLTCSVTGDSITSDYWSWIRKFPGNRLEYMGYVSYSGSTYYNPSLKSRISITRDTSKNQYYLDLNSVT 86 (210)
T ss_dssp ESCSEECTTSCEEEEEEEESSCGGGSCEEEEEEETTTEEEEEEEECTTSCEEECGGGTTTEEEEEEGGGTEEEEEECSCC
T ss_pred CCCEEecCCCcEEEEEEEecccCCCCcEEEEEeCCCCCcEEEEEEcCCCCeEECcccCceEEEEecCCCCEEEEEECCCC
Confidence 4456788999999999998764 368999874 22110 012455544211 122369999999
Q ss_pred CCCCCeEEEEEeeeCC
Q psy2442 77 HARDDAVYECVAENGV 92 (111)
Q Consensus 77 ~~~d~g~y~c~~~~~~ 92 (111)
. .|+|.|.|.+.|..
T Consensus 87 ~-~D~G~Y~C~~~~~~ 101 (210)
T 3d9a_H 87 T-EDTATYYCANWDGD 101 (210)
T ss_dssp G-GGCEEEEEEETTSS
T ss_pred c-ccCEEEEEEEecCc
Confidence 8 99999999998853
No 461
>3liz_H 4C3 monoclonal antibody heavy chain; hydrolase-immune system complex; HET: NAG BMA MAN; 1.80A {Mus musculus} PDB: 3rvv_D* 3rvu_D 3rvt_D* 3rvw_D* 3rvx_D 1lo4_H 1ub6_H 3r06_B 3r08_H
Probab=98.74 E-value=4.1e-08 Score=55.66 Aligned_cols=83 Identities=14% Similarity=0.328 Sum_probs=50.6
Q ss_pred eEEec----CCCeeEEcCcceeeecCCcEEEEEEEec-cCCC-eEEEEECCeeccCC-------CCceEEEeCCCCCeEE
Q psy2442 4 KVRFL----DPPEITLRPRNQAVKAGGITSFYCIARG-DPIP-VIQWRKNGKRVSGT-------QSRYMVQEFPPGGSLL 70 (111)
Q Consensus 4 ~l~v~----~~p~~~~~~~~~~~~~g~~~~l~c~~~~-~~~~-~~~w~~~~~~~~~~-------~~~~~~~~~~~~~~~l 70 (111)
.|.|. .+|.+........+..|+.++|.|.+.+ .|.+ .+.|++++...... ...+.. ...|
T Consensus 114 ~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~~~~~~~~~~~~~~~~~~g~~~~------~s~L 187 (253)
T 3liz_H 114 LVTVSAAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTL------SSSV 187 (253)
T ss_dssp EEEECSSCCBCCEEEEECC------CCEEEEEEEEEEEBSSCCEEEEGGGTBCTTEEECCCEEETTEEEE------EEEE
T ss_pred EEEEeccCCCCCeEEEecCCcccCCCCcEEEEEEEeeEeCCCeEEEEEeCCeecceEeCCccccCCeEEE------EEEE
Confidence 55664 3455543333334567999999999988 5655 79999887632100 012221 1347
Q ss_pred EEccCCCCCCCeEEEEEeeeCCCc
Q psy2442 71 RIEPVRHARDDAVYECVAENGVGD 94 (111)
Q Consensus 71 ~~~~~~~~~d~g~y~c~~~~~~~~ 94 (111)
.+..... .| |.|.|.+.|..+.
T Consensus 188 ~i~~~~~-~d-g~ytC~v~~~~~~ 209 (253)
T 3liz_H 188 TVPSSTW-PS-ETVTCNVAHPASS 209 (253)
T ss_dssp EEETTST-TT-SCCEEEEEEGGGT
T ss_pred EEcHHHC-CC-ceEEEEEEECCCC
Confidence 7888876 78 9999999998764
No 462
>4ety_A LAIR-1, mlair1, leukocyte-associated immunoglobulin-like receptor; IG-like domain, extra celluar domain, domain swappin nysgrc, structural genomics; 1.90A {Mus musculus}
Probab=98.74 E-value=2.7e-07 Score=46.76 Aligned_cols=88 Identities=17% Similarity=0.252 Sum_probs=53.9
Q ss_pred CCeeEEcCcceeeecCCcEEEEEEEeccCC----CeEEEEECCeeccCCCCceEEEeCCCCCeEEEEccCCCCCCCeEEE
Q psy2442 10 PPEITLRPRNQAVKAGGITSFYCIARGDPI----PVIQWRKNGKRVSGTQSRYMVQEFPPGGSLLRIEPVRHARDDAVYE 85 (111)
Q Consensus 10 ~p~~~~~~~~~~~~~g~~~~l~c~~~~~~~----~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~g~y~ 85 (111)
+|.+...+. -.+..|+.++|.| ... .. ..+.|+++|..... ...........|.|..+.. .|+|.|.
T Consensus 9 kPsL~a~P~-~vV~~G~~VTL~C-~~~-~~~~~~~~f~L~k~g~~~~~-----~~~~~~~~~a~f~i~~vt~-~daG~Y~ 79 (118)
T 4ety_A 9 DITIFPNSS-LMISQGTFVTVVC-SYS-DKHDLYNMVRLEKDGSTFME-----KSTEPYKTEDEFEIGPVNE-TITGHYS 79 (118)
T ss_dssp EEEEECCSE-EEEETTCCEEEEE-ECT-TTGGGCCEEEEEETTEEEEE-----EECCSSSSEEEEEECSCCG-GGCEEEE
T ss_pred CCEEEEeCC-CcccCCCcEEEEE-CCC-CCCcccCEEEEEECCcCccc-----cccCCCCcceEEEeCccCc-cCCeEEE
Confidence 344444444 3677899999999 543 33 46788888875421 0000011334589999998 9999999
Q ss_pred EEeeeCCC-ceEeeEEEEEEec
Q psy2442 86 CVAENGVG-DAVSAEASLTVYE 106 (111)
Q Consensus 86 c~~~~~~~-~~~~~~~~l~~~~ 106 (111)
|...+..+ ...+..+.|.|.+
T Consensus 80 C~y~~~~~wS~~Sdpl~L~Vtg 101 (118)
T 4ety_A 80 CIYSKGITWSERSKTLELKVIK 101 (118)
T ss_dssp EEEEC----CEECCCEEEEEEC
T ss_pred EEeeCCCccccccCCEEEEEEE
Confidence 99877544 2235566666654
No 463
>2eys_A NKT15; natural killer T cell receptor, immune system; 2.21A {Homo sapiens} PDB: 2eyr_A 2eyt_A 3huj_E* 3tyf_A 3tzv_A* 3sdx_E* 2po6_C* 2cde_A 3to4_C*
Probab=98.74 E-value=8.1e-07 Score=49.30 Aligned_cols=77 Identities=21% Similarity=0.367 Sum_probs=53.8
Q ss_pred eEEcCcceeeecCCcEEEEEEEeccCCCeEEEEECC--ee---c-c--C-----CCCceEEEe-CCCCCeEEEEccCCCC
Q psy2442 13 ITLRPRNQAVKAGGITSFYCIARGDPIPVIQWRKNG--KR---V-S--G-----TQSRYMVQE-FPPGGSLLRIEPVRHA 78 (111)
Q Consensus 13 ~~~~~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~~--~~---~-~--~-----~~~~~~~~~-~~~~~~~l~~~~~~~~ 78 (111)
+.+.+..+.+.+|++++|.|...+.....+.|++.. .. + . . ...|+.... .......|.|.+++.
T Consensus 6 v~Q~p~~~~v~~G~svtL~C~~s~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~Rfs~~~~~~~~~~sL~I~~~~~- 84 (210)
T 2eys_A 6 VEQSPQSLIILEGKNCTLQCNYTVSPFSNLRWYKQDTGRGPVSLTIMTFSENTKSNGRYTATLDADTKQSSLHITASQL- 84 (210)
T ss_dssp EEEECSEEEEETTCCEEEEEEECCSSCCEEEEEEECTTSCCEEEEEEETTCSEEEETTEEEEEETTTTEEEEEESSCCG-
T ss_pred EEEeCCEEEEecCCCEEEEEEECCCCCCeEEEEEeCCCCCCEEEEEEecCCCCccCCCEEEEEcCCCCEEEEEEccCCc-
Confidence 445566788999999999999877666689999742 11 1 1 1 023454432 111334599999998
Q ss_pred CCCeEEEEEeee
Q psy2442 79 RDDAVYECVAEN 90 (111)
Q Consensus 79 ~d~g~y~c~~~~ 90 (111)
+|+|.|.|.+.+
T Consensus 85 ~Dsg~Y~C~~~~ 96 (210)
T 2eys_A 85 SDSASYICVVSD 96 (210)
T ss_dssp GGCEEEEEEEES
T ss_pred ccCceEEEEEEc
Confidence 999999999876
No 464
>4dzb_B Vbeta2 (MAIT T cell receptor); immune system; 1.70A {Homo sapiens} PDB: 1ymm_E* 3o4l_E* 3o6f_D 3t0e_D 1ktk_E 3mfg_B 2ij0_E
Probab=98.74 E-value=6.1e-08 Score=54.53 Aligned_cols=82 Identities=20% Similarity=0.286 Sum_probs=50.3
Q ss_pred CCeeE-EcCcceeeecCCcEEEEEEEeccCCC--eEEEEECCeeccCCCCceEE--EeC----CCCC----eEEEEccCC
Q psy2442 10 PPEIT-LRPRNQAVKAGGITSFYCIARGDPIP--VIQWRKNGKRVSGTQSRYMV--QEF----PPGG----SLLRIEPVR 76 (111)
Q Consensus 10 ~p~~~-~~~~~~~~~~g~~~~l~c~~~~~~~~--~~~w~~~~~~~~~~~~~~~~--~~~----~~~~----~~l~~~~~~ 76 (111)
+|.+. ..+....+..|+.++|.|.+.+.+++ .+.|+++|..+.... +... ... .+.. ..|.+....
T Consensus 124 ~P~i~~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~l~~~~-~~~~~~~~~~~~~~~g~~~~~s~l~i~~~~ 202 (246)
T 4dzb_B 124 PPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWVNGKEVHSGV-CTDPQPLKEQPALNDSRYALSSRLRVSATF 202 (246)
T ss_dssp CCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEETTEEECTTE-EECSSCEESSTTSTTCCEEEEEEEEEEHHH
T ss_pred CCceEeecCCchhccCCCcEEEEEEEccCcCCceEEEEEECCEECCCCc-ccccccccccccCCCCCEEEEEEEEECHHH
Confidence 44443 23333345569999999999886654 899999998875321 0000 000 0011 226666665
Q ss_pred CCCC-CeEEEEEeeeCCC
Q psy2442 77 HARD-DAVYECVAENGVG 93 (111)
Q Consensus 77 ~~~d-~g~y~c~~~~~~~ 93 (111)
. .| .|.|.|.+.|...
T Consensus 203 ~-~d~~g~YtC~v~~~~~ 219 (246)
T 4dzb_B 203 W-QNPRNHFRCQVQFYGL 219 (246)
T ss_dssp H-TCTTCEEEEEEEECCB
T ss_pred h-ccCCCeEEEEEEecCC
Confidence 5 66 8999999998653
No 465
>2ny1_B T-cell surface glycoprotein CD4; HIV, GP120, CD4, viral protein-immune system compl; HET: NAG SUC; 1.99A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 2nxz_B* 2ny0_B* 2nxy_B* 2ny2_B* 2ny3_B* 2ny4_B* 2ny5_C* 2ny6_B* 3jwd_C* 3jwo_C* 1g9m_C* 1g9n_C* 1gc1_C* 1rzj_C* 1rzk_C* 3o2d_A 3cd4_A 3lqa_C* 2b4c_C* 2qad_B* ...
Probab=98.74 E-value=5.9e-09 Score=56.24 Aligned_cols=72 Identities=18% Similarity=0.282 Sum_probs=50.5
Q ss_pred eeeecCCcEEEEEEEeccCCCeEEEEECCee--cc-----------CCCCceEEEeC--CCCCeEEEEccCCCCCCCeEE
Q psy2442 20 QAVKAGGITSFYCIARGDPIPVIQWRKNGKR--VS-----------GTQSRYMVQEF--PPGGSLLRIEPVRHARDDAVY 84 (111)
Q Consensus 20 ~~~~~g~~~~l~c~~~~~~~~~~~w~~~~~~--~~-----------~~~~~~~~~~~--~~~~~~l~~~~~~~~~d~g~y 84 (111)
+.+..|+.+.|.|...+.+.+.+.|++++.. +. ....++..... ......|.|.++.. .|+|.|
T Consensus 5 v~~~~G~~v~L~C~~~~~~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~i~~v~~-~D~G~Y 83 (184)
T 2ny1_B 5 VLGKKGDTVELTCTASQKKSIQFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRSLWDQGNFPLIIKNLKI-EDSDTY 83 (184)
T ss_dssp EEEETTSCEEECCBCSSSSCCCEEEEETTCCEEEEEETTEEEECSCTTGGGEECCGGGGGGTBCCEEECSCCG-GGCEEE
T ss_pred EEEeCCCCEEEEEEEcCCCceEEEEEeCCccceEEecCceEecCChhhCCccccccccccCCeEEEEEecCCH-HHCEEE
Confidence 5678999999999998888889999998752 11 00122222110 00233499999998 999999
Q ss_pred EEEeeeCC
Q psy2442 85 ECVAENGV 92 (111)
Q Consensus 85 ~c~~~~~~ 92 (111)
.|.+.|..
T Consensus 84 ~C~~~~~~ 91 (184)
T 2ny1_B 84 ICEVEDQK 91 (184)
T ss_dssp EEEETTEE
T ss_pred EEEEEcCC
Confidence 99988754
No 466
>1pz5_B Heavy chain of FAB (SYA/J6); antibody-antigen structure, peptide-carbohydrate mimicry, VA design, immune system; 1.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1m7d_B* 1m71_B* 1m7i_B* 1r24_B 1uz6_F 1uz8_B* 1clz_H*
Probab=98.73 E-value=3.4e-07 Score=50.65 Aligned_cols=75 Identities=21% Similarity=0.429 Sum_probs=51.8
Q ss_pred CcceeeecCCcEEEEEEEeccC--CCeEEEEECC--ee---c---cC------------CCCceEEEeCC-CCCeEEEEc
Q psy2442 17 PRNQAVKAGGITSFYCIARGDP--IPVIQWRKNG--KR---V---SG------------TQSRYMVQEFP-PGGSLLRIE 73 (111)
Q Consensus 17 ~~~~~~~~g~~~~l~c~~~~~~--~~~~~w~~~~--~~---~---~~------------~~~~~~~~~~~-~~~~~l~~~ 73 (111)
+..+.+..|++++|.|...+.+ .+.+.|++.+ .. + .. ...|+...... .....|.|.
T Consensus 7 p~~~~~~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~ 86 (220)
T 1pz5_B 7 SGGGLVQPGGSMKLSCVASGFTFSNYWMEWVRQSPEKGLEWVAEIRLKSNNYATHYAESVKGRFTISRDDSKSSVYLQMN 86 (220)
T ss_dssp ECCEEECTTCCEEEEEEEESSCGGGSEEEEEEEETTTEEEEEEEECCGGGTTCEEECGGGTTTEEEEEEGGGTEEEEEEC
T ss_pred cCCEEEcCCCeEEEEEEEcCCccCCccEEEEEeCCCCCcEEEEEEEcCCCccccccCcccCCcEEEEEeCCCCeEEEEEc
Confidence 4456788999999999998765 5789999853 11 1 00 02455543211 122359999
Q ss_pred cCCCCCCCeEEEEEeeeCC
Q psy2442 74 PVRHARDDAVYECVAENGV 92 (111)
Q Consensus 74 ~~~~~~d~g~y~c~~~~~~ 92 (111)
++.. .|+|.|.|.+.+..
T Consensus 87 ~v~~-~D~G~Y~C~~~~~~ 104 (220)
T 1pz5_B 87 NLRA-EDTGIYYCTRGGAV 104 (220)
T ss_dssp SCCG-GGCEEEEEEEECTT
T ss_pred cCCH-HHCEEEEEEEecCC
Confidence 9998 99999999999864
No 467
>1lp9_E T-cell receptor alpha chain; immunoregulatory complex, class I MHC:TCR CO-crystal, immune; 2.00A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 2j8u_E 2jcc_E 2uwe_E 1nfd_A*
Probab=98.73 E-value=2.2e-07 Score=50.91 Aligned_cols=77 Identities=13% Similarity=0.189 Sum_probs=53.1
Q ss_pred eEEcCcceeeecCCcEEEEEEEeccCCCeEEEEECC--ee---c-c-------CCCCceEEEeC-CCCCeEEEEccCCCC
Q psy2442 13 ITLRPRNQAVKAGGITSFYCIARGDPIPVIQWRKNG--KR---V-S-------GTQSRYMVQEF-PPGGSLLRIEPVRHA 78 (111)
Q Consensus 13 ~~~~~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~~--~~---~-~-------~~~~~~~~~~~-~~~~~~l~~~~~~~~ 78 (111)
+.+.+..+.+.+|++++|.|...+.....+.|++.. .. + . ....|+..... ......|.|.+++.
T Consensus 4 v~Q~p~~v~v~~G~~v~L~C~~s~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~Rfs~~~~~~~~~~sL~I~~~~~- 82 (194)
T 1lp9_E 4 VTQTEGLVTLTEGLPVMLNCTYQSTYSPFLFWYVQHLNEAPKLLLKSFTDNKRPEHQGFHATLHKSSSSFHLQKSSAQL- 82 (194)
T ss_dssp EEECCSEEEEETTSCEEECEEEECSSSCCEEEEEECTTSCCEEEEESCSSTTCCCCSSCEECCBGGGTBCCEEESSCCG-
T ss_pred cEecCCEEEEecCCCEEEEEEeCCCCCceEEEEEeCCCCCeEEEEEEcCCCCcccCCCeEEEecCCCCEEEEEEcccCc-
Confidence 445567788999999999999877666689998753 21 1 0 01245544311 11223499999998
Q ss_pred CCCeEEEEEeee
Q psy2442 79 RDDAVYECVAEN 90 (111)
Q Consensus 79 ~d~g~y~c~~~~ 90 (111)
+|+|.|.|.+.+
T Consensus 83 ~Dsg~Y~C~~~~ 94 (194)
T 1lp9_E 83 SDSALYYCALFL 94 (194)
T ss_dssp GGCEEEEEEEEE
T ss_pred ccCeeEEEEEec
Confidence 999999999876
No 468
>3bn9_D E2 FAB heavy chain; antibody-protease complex, protein-protein complex, enzyme- inhibitor complex, disease mutation, glycoprotein, hydrolase; 2.17A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 3kr3_H 2xtj_E
Probab=98.73 E-value=1.6e-07 Score=53.57 Aligned_cols=75 Identities=23% Similarity=0.378 Sum_probs=51.8
Q ss_pred cceeeecCCcEEEEEEEeccC--CCeEEEEECC--eecc----------------CCCCceEEEeCC-CCCeEEEEccCC
Q psy2442 18 RNQAVKAGGITSFYCIARGDP--IPVIQWRKNG--KRVS----------------GTQSRYMVQEFP-PGGSLLRIEPVR 76 (111)
Q Consensus 18 ~~~~~~~g~~~~l~c~~~~~~--~~~~~w~~~~--~~~~----------------~~~~~~~~~~~~-~~~~~l~~~~~~ 76 (111)
..+.+..|++++|.|...+.+ .+.+.|++.. ..+. ....|+...... .....|.|.+++
T Consensus 8 ~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~ 87 (257)
T 3bn9_D 8 GGGLVKPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMSSLR 87 (257)
T ss_dssp CCEEECTTCEEEEEEEEESSCGGGCCEEEEEECTTSCEEEEEEECSSSCCEEECGGGTTTEEEEEETTTTEEEEEEESCC
T ss_pred CCEEEcCCCcEEEEEEeccccCCCceEEEEEECCCCCeEEEEEEecCCCceecCcccCCceEEEecCCCCEEEEEECCCC
Confidence 346788999999999998754 5689999753 1110 012455544321 133459999999
Q ss_pred CCCCCeEEEEEeeeCCC
Q psy2442 77 HARDDAVYECVAENGVG 93 (111)
Q Consensus 77 ~~~d~g~y~c~~~~~~~ 93 (111)
. .|+|.|.|.+.+..+
T Consensus 88 ~-~DsG~Y~C~~~~~~g 103 (257)
T 3bn9_D 88 A-EDTAVYYCARPYLTY 103 (257)
T ss_dssp G-GGCEEEEEEEECCSS
T ss_pred h-hhCEEEEEEEecCCC
Confidence 8 999999999988653
No 469
>2vol_A Murine IGG FC; FC, zinc, B30.2, nucleus, pryspry, cytoplasm, mouse IGG, zinc-finger, DNA-binding, RNA-binding, tripartite motif (TRIM) protein; HET: NAG MAN GAL FUC; 1.95A {Mus musculus} PDB: 3hkf_A 1i1a_C* 1cqk_A
Probab=98.72 E-value=4.6e-08 Score=53.86 Aligned_cols=85 Identities=13% Similarity=0.174 Sum_probs=49.8
Q ss_pred ecCCCeeEEcCcceeeecCCcEEEEEEEeccC-C-CeEEEEECCeeccCCCCceE-EEeCCCCC---eEEEEccCCCCCC
Q psy2442 7 FLDPPEITLRPRNQAVKAGGITSFYCIARGDP-I-PVIQWRKNGKRVSGTQSRYM-VQEFPPGG---SLLRIEPVRHARD 80 (111)
Q Consensus 7 v~~~p~~~~~~~~~~~~~g~~~~l~c~~~~~~-~-~~~~w~~~~~~~~~~~~~~~-~~~~~~~~---~~l~~~~~~~~~d 80 (111)
+..+|.+...+.......|+.+.|.|.+.+.+ . ..+.|+++|..+... .... ....++.. ..|.+..... .|
T Consensus 106 ~~~~P~v~~~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~-~~~~~~~~~~g~~~~~s~l~i~~~~~-~~ 183 (207)
T 2vol_A 106 RPKAPQVYTLPPPKEQMAKDKVSLTCMITDFFPEDITVEWESNGQPAENY-KNTQPIMDTDGSYFVYSKLNVQKSNW-EA 183 (207)
T ss_dssp CCBCCEEEEECCCTGGGSSSEEEEEEEEEEEBSSCCEEEEEETTEECSCE-EECCCEECTTSCEEEEEEEEEEHHHH-SS
T ss_pred CCcCCeEEEeCCCHHHhcCCceEEEEEEeeEECCCCEEEEEECCEeccCc-ccCCceECCCCCEEEEEEEEECHHHc-CC
Confidence 34566665433332233589999999998854 4 389999999876431 1110 11111110 1244444443 57
Q ss_pred CeEEEEEeeeCCC
Q psy2442 81 DAVYECVAENGVG 93 (111)
Q Consensus 81 ~g~y~c~~~~~~~ 93 (111)
.|.|.|.+.|...
T Consensus 184 ~g~ytC~a~n~~l 196 (207)
T 2vol_A 184 GNTFTCSVLHEGL 196 (207)
T ss_dssp CCEEEEEEECTTS
T ss_pred CCEEEEEEECCCC
Confidence 8999999999754
No 470
>1ypz_E T cell receptor delta, beta-2-microglobulin; H2-T22 protein, T cell receptor delta, immune system; HET: NAG MAN FUC; 3.40A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=98.72 E-value=1.5e-07 Score=51.91 Aligned_cols=77 Identities=17% Similarity=0.235 Sum_probs=53.7
Q ss_pred eEEcCcceeeecCCcEEEEEEEeccCCCeEEEEECC--eecc---------CCCCceEEEeC-C-CCCeEEEEccCCCCC
Q psy2442 13 ITLRPRNQAVKAGGITSFYCIARGDPIPVIQWRKNG--KRVS---------GTQSRYMVQEF-P-PGGSLLRIEPVRHAR 79 (111)
Q Consensus 13 ~~~~~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~~--~~~~---------~~~~~~~~~~~-~-~~~~~l~~~~~~~~~ 79 (111)
+.+.+..+.+..|++++|.|...+.. +.+.|++.. ..+. ....|+..... . .....|.|.+++. .
T Consensus 4 v~q~p~~v~v~~G~~v~L~C~~~~~~-~~v~W~r~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~~L~I~~v~~-~ 81 (207)
T 1ypz_E 4 VEQSPSALSLHEGTDSALRCNFTTTM-RSVQWFRQNSRGSLISLFYLASGTKENGRLKSAFDSKERRYSTLHIRDAQL-E 81 (207)
T ss_dssp EEESCSEEEEETTCCEEEEEEESSCC-SEEEEEEECTTSCCEEEEEESSEEEEETTEEEEECTTTCSEEEEEECSCCG-G
T ss_pred cEECCCeEEEccCCcEEEEEEEeCCC-eEEEEEEeCCCCCeEEEEEEccCCccCCCEEEEeccCCCCEEEEEECCCCH-H
Confidence 34566677899999999999987654 489999743 1110 01245555432 1 1334599999998 9
Q ss_pred CCeEEEEEeeeC
Q psy2442 80 DDAVYECVAENG 91 (111)
Q Consensus 80 d~g~y~c~~~~~ 91 (111)
|+|.|.|.+.+.
T Consensus 82 D~G~Y~C~~~~~ 93 (207)
T 1ypz_E 82 DSGTYFCAADTW 93 (207)
T ss_dssp GCEEEEEEEECB
T ss_pred HCEEEEEEEecC
Confidence 999999999875
No 471
>3m8o_H Immunoglobulin A1 heavy chain; immunoglobulin fold, immune system; 1.55A {Homo sapiens} PDB: 3qnx_B 3qny_B
Probab=98.72 E-value=4.3e-07 Score=50.34 Aligned_cols=74 Identities=19% Similarity=0.414 Sum_probs=49.7
Q ss_pred CcceeeecCCcEEEEEEEeccC--CCeEEEEECCe--ecc------------------CCCCceEEEeCC-CCCeEEEEc
Q psy2442 17 PRNQAVKAGGITSFYCIARGDP--IPVIQWRKNGK--RVS------------------GTQSRYMVQEFP-PGGSLLRIE 73 (111)
Q Consensus 17 ~~~~~~~~g~~~~l~c~~~~~~--~~~~~w~~~~~--~~~------------------~~~~~~~~~~~~-~~~~~l~~~ 73 (111)
+..+.+..|++++|.|...+.+ .+.+.|++... ... ....|+.+.... .....|.|.
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~ 86 (221)
T 3m8o_H 7 SGGGLVQPGGSLKLSCAASGFTLSGSNVHWVRQASGKGLEWVGRIKRNAESDATAYAASMRGRLTISRDDSKNTAFLQMN 86 (221)
T ss_dssp ESCEEECTTCCEEEEEEEESSCGGGSEEEEEEECTTSCEEEEEEECCGGGTTCEEECGGGTTSEEEEEEGGGTEEEEEEC
T ss_pred cCCEEEcCCCCEEEEEEcccccccccEEEEEEECCCCCcEEEEEEcccccCcccccCccccccEEEEecCCCCEEEEEEC
Confidence 3346788999999999988643 56899987321 100 012455443211 123359999
Q ss_pred cCCCCCCCeEEEEEeeeC
Q psy2442 74 PVRHARDDAVYECVAENG 91 (111)
Q Consensus 74 ~~~~~~d~g~y~c~~~~~ 91 (111)
++.. .|+|.|.|.+.+.
T Consensus 87 ~v~~-~DsG~Y~C~~~~~ 103 (221)
T 3m8o_H 87 SLKS-DDTAMYYCVIRGD 103 (221)
T ss_dssp SCCG-GGCEEEEEEEESC
T ss_pred CCCH-HHCEEEEEEEECC
Confidence 9998 9999999999875
No 472
>1hxm_A Gamma-delta T-cell receptor; IG domain, TCR, GDTCR, immune system; 3.12A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=98.71 E-value=5.2e-07 Score=50.66 Aligned_cols=78 Identities=17% Similarity=0.333 Sum_probs=53.6
Q ss_pred eEEcCcceeeecCCcEEEEEEEeccC--CCeEEEEECC--ee---c-c-------CCCCceEEEeC-CCCCeEEEEccCC
Q psy2442 13 ITLRPRNQAVKAGGITSFYCIARGDP--IPVIQWRKNG--KR---V-S-------GTQSRYMVQEF-PPGGSLLRIEPVR 76 (111)
Q Consensus 13 ~~~~~~~~~~~~g~~~~l~c~~~~~~--~~~~~w~~~~--~~---~-~-------~~~~~~~~~~~-~~~~~~l~~~~~~ 76 (111)
+.+.+..+.+..|++++|.|...+.+ ...+.|++.. .. + . ....|+..... ......|.|.+++
T Consensus 4 v~q~p~~v~v~~G~~vtL~C~~s~~~~~~~~v~W~rq~~g~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~ 83 (229)
T 1hxm_A 4 LVPEHQTVPVSIGVPATLRCSMKGEAIGNYYINWYRKTQGNTMTFIYREKDIYGPGFKDNFQGDIDIAKNLAVLKILAPS 83 (229)
T ss_dssp EEESCSEEEEETTCCEEEEEEECSSCGGGSEEEEEEEESSSCSEEEEETTTEECTTTTTTEEEEEEGGGTEEEEEESSCC
T ss_pred cEeCCCEEEEcCCCCEEEEeEecCCccCcceEEEEEECCCCCcEEEEEcCCccCCCcCCeEEEEEcCCCCEEEEEECcCC
Confidence 34566777899999999999987543 3579998742 11 1 0 11246655432 1133459999999
Q ss_pred CCCCCeEEEEEeeeC
Q psy2442 77 HARDDAVYECVAENG 91 (111)
Q Consensus 77 ~~~d~g~y~c~~~~~ 91 (111)
. .|+|.|.|.+.+.
T Consensus 84 ~-~Dsg~Y~C~~~~~ 97 (229)
T 1hxm_A 84 E-RDEGSYYCACDTL 97 (229)
T ss_dssp G-GGCEEEEEEEECC
T ss_pred H-hHCeEEEEEEecC
Confidence 8 9999999998875
No 473
>2xqy_G A13-D6.3 monoclonal antibody, envelope glycoprotein H; immune system-viral protein complex, envelope protein; HET: NAG; 2.05A {Mus musculus}
Probab=98.71 E-value=2e-07 Score=53.21 Aligned_cols=76 Identities=20% Similarity=0.325 Sum_probs=52.6
Q ss_pred cCcceeeecCCcEEEEEEEeccC--CCeEEEEECC--eec------cC----------CCCceEEEeCC-CCCeEEEEcc
Q psy2442 16 RPRNQAVKAGGITSFYCIARGDP--IPVIQWRKNG--KRV------SG----------TQSRYMVQEFP-PGGSLLRIEP 74 (111)
Q Consensus 16 ~~~~~~~~~g~~~~l~c~~~~~~--~~~~~w~~~~--~~~------~~----------~~~~~~~~~~~-~~~~~l~~~~ 74 (111)
.+..+.+..|++++|.|...+.+ .+.+.|++.. ..+ .. ...|+.+.... .....|.|.+
T Consensus 12 ~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~ 91 (261)
T 2xqy_G 12 QPGAELVKPGASVKMSCKASGYSFTSYWMNWVKQRPGRGLEWIGRIDPSDNETHYNQDFKDKVTLTVDKSSSTVYIQLSS 91 (261)
T ss_dssp CCSEEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTTCCEEECGGGTTTEEEEEEGGGTEEEEEECS
T ss_pred CCCCEEEcCCCCEEEEEEeCCcccCCceEEEEEeCCCCCcEEEEEEecCCCceeeCCccCCcEEEEecCCCCEEEEEEcC
Confidence 34556788999999999998765 5689999752 211 00 12455544211 1234599999
Q ss_pred CCCCCCCeEEEEEeeeCC
Q psy2442 75 VRHARDDAVYECVAENGV 92 (111)
Q Consensus 75 ~~~~~d~g~y~c~~~~~~ 92 (111)
++. .|+|.|.|.+.+..
T Consensus 92 v~~-~DsG~Y~C~~~~~~ 108 (261)
T 2xqy_G 92 LTS-EDSAVYYCGRLGYV 108 (261)
T ss_dssp CCG-GGCEEEEEEEECTT
T ss_pred CCc-ccCeEEEEEEecCC
Confidence 998 99999999998853
No 474
>2q86_A Valpha14 TCR; INKT cells, TCR, glycolipid recognition, innate immunity, IM system; HET: NAG BMA MAN FUC; 1.85A {Mus musculus} PDB: 3quy_C* 3o9w_C* 3qux_C* 3o8x_C* 3quz_C* 3rtq_C* 3rzc_C* 3ta3_C* 3tvm_C* 3qi9_C* 3ard_C* 3are_C* 3arf_C* 3arg_C* 3he6_C* 3he7_C* 3arb_C* 3scm_C* 3sda_C* 3sdc_C* ...
Probab=98.71 E-value=2.8e-07 Score=51.84 Aligned_cols=77 Identities=23% Similarity=0.359 Sum_probs=52.7
Q ss_pred eEEcCcceeeecCCcEEEEEEEeccCCCeEEEEECC--eec------cC-----CCCceEEEe-CCCCCeEEEEccCCCC
Q psy2442 13 ITLRPRNQAVKAGGITSFYCIARGDPIPVIQWRKNG--KRV------SG-----TQSRYMVQE-FPPGGSLLRIEPVRHA 78 (111)
Q Consensus 13 ~~~~~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~~--~~~------~~-----~~~~~~~~~-~~~~~~~l~~~~~~~~ 78 (111)
+.+.+..+.+..|++++|.|...+.....+.|++.. ..+ .. ...|+.... .......|.|.+++.
T Consensus 4 v~Q~p~~v~v~~G~svtL~C~~s~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~Rfs~~~~~~~~~~sL~I~~~~~- 82 (229)
T 2q86_A 4 VEQSPQSLVVRQGENCVLQCNYSVTPDNHLRWYKQDTGKGLVLLTVLVDQKDKTSNGRYSATLDKDAKHSTLHITATLL- 82 (229)
T ss_dssp EEEECSEEEEETTCCEEEEEEECCSCCSCEEEEEECTTCCEEEEEEECSSEEEEEETTEEEEEETTTTEEEEEECSCCG-
T ss_pred eEECCCEEEEecCCCEEEEEEECCCCCcEEEEEEECCCCCcEEEEEEcCCCCcccCCCEEEEEcCCCCEEEEEEcccCc-
Confidence 345566678999999999999876655689999742 211 00 023454432 111234599999998
Q ss_pred CCCeEEEEEeee
Q psy2442 79 RDDAVYECVAEN 90 (111)
Q Consensus 79 ~d~g~y~c~~~~ 90 (111)
.|+|.|.|.+.+
T Consensus 83 ~Dsg~Y~C~~~~ 94 (229)
T 2q86_A 83 DDTATYFCVVGD 94 (229)
T ss_dssp GGCEEEEEEESC
T ss_pred ccCccEEEEEEe
Confidence 999999999865
No 475
>2vol_A Murine IGG FC; FC, zinc, B30.2, nucleus, pryspry, cytoplasm, mouse IGG, zinc-finger, DNA-binding, RNA-binding, tripartite motif (TRIM) protein; HET: NAG MAN GAL FUC; 1.95A {Mus musculus} PDB: 3hkf_A 1i1a_C* 1cqk_A
Probab=98.70 E-value=2.2e-08 Score=55.19 Aligned_cols=79 Identities=13% Similarity=0.175 Sum_probs=51.1
Q ss_pred EcCccee-eecCCcEEEEEEEeccC---C-CeEEEEECCeeccCCCCceEEEeCCC---CCeEEEEccCCCCCCCeEEEE
Q psy2442 15 LRPRNQA-VKAGGITSFYCIARGDP---I-PVIQWRKNGKRVSGTQSRYMVQEFPP---GGSLLRIEPVRHARDDAVYEC 86 (111)
Q Consensus 15 ~~~~~~~-~~~g~~~~l~c~~~~~~---~-~~~~w~~~~~~~~~~~~~~~~~~~~~---~~~~l~~~~~~~~~d~g~y~c 86 (111)
..+.... +..|+++.|.|.+.+.+ . ..+.|++++..+.............+ ....|.|.++.. .|.|.|.|
T Consensus 7 ~~P~~~~~v~~G~~v~L~C~~~g~~~~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~-~D~G~Y~C 85 (207)
T 2vol_A 7 FPPKPKDVLTITLTPKVTCVVVDISKDDPEVQFSWFVDDVEVHTAQTKPREEQFNSTFRSVSELPIMHQDW-LNGKEFKC 85 (207)
T ss_dssp ECCCHHHHHSTTSCCEEEEEEEEECTTCCCCEEEEEETTEEECCCEEECCCEETTTEEEEEEEEECCHHHH-HTTCCEEE
T ss_pred eCcChhhhhccCCceEEEEEEeCcccCCCceEEEEEECCccccccccCCCcCcCCCcEEEEEEEEEehhHc-CCCCEEEE
Confidence 3444333 77899999999998874 2 38999999876532100000000000 113478888887 89999999
Q ss_pred EeeeCCCc
Q psy2442 87 VAENGVGD 94 (111)
Q Consensus 87 ~~~~~~~~ 94 (111)
.+.|..+.
T Consensus 86 ~a~~~~~~ 93 (207)
T 2vol_A 86 RVNSAAFP 93 (207)
T ss_dssp EEECTTCS
T ss_pred EEEccCCC
Confidence 99997664
No 476
>1u9k_A Triggering receptor expressed on myeloid cells 1; activating receptors, TREM-1, innate immunity, immune system receptor, immune system; 1.76A {Mus musculus} SCOP: b.1.1.1
Probab=98.70 E-value=1.1e-07 Score=47.68 Aligned_cols=78 Identities=12% Similarity=0.174 Sum_probs=51.4
Q ss_pred EcCcceeeecCCcEEEEEEEeccC--CCeEEEEECC--eec----c--C-C-------CCceEEEeC-CCCCeEEEEccC
Q psy2442 15 LRPRNQAVKAGGITSFYCIARGDP--IPVIQWRKNG--KRV----S--G-T-------QSRYMVQEF-PPGGSLLRIEPV 75 (111)
Q Consensus 15 ~~~~~~~~~~g~~~~l~c~~~~~~--~~~~~w~~~~--~~~----~--~-~-------~~~~~~~~~-~~~~~~l~~~~~ 75 (111)
+.+..+.+.+|++++|.|...+.. ...+.|++.. ..+ . . . ..|+..... ......|.|.++
T Consensus 4 q~p~~v~~~~G~~vtL~C~~~~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~~ 83 (114)
T 1u9k_A 4 LEEERYDLVEGQTLTVKCPFNIMKYANSQKAWQRLPDGKEPLTLVVTQRPFTRPSEVHMGKFTLKHDPSEAMLQVQMTDL 83 (114)
T ss_dssp -CCEEEEECTTCCEEEEEECCHHHHTTSEEEEEECCTTSCCEEEEECCSSTTSCEEEEETTEEEEEEGGGTEEEEEECSC
T ss_pred cCCccEEEeCCCcEEEEeEecCcccCCceEEEEEeCCCCCCEEEEEEcCCCCccccccCCcEEEEecCcCCEEEEEECCC
Confidence 345567889999999999986532 4579999852 211 0 0 0 134444321 112345999999
Q ss_pred CCCCCCeEEEEEeeeCCC
Q psy2442 76 RHARDDAVYECVAENGVG 93 (111)
Q Consensus 76 ~~~~d~g~y~c~~~~~~~ 93 (111)
+. +|+|.|.|.+.+..+
T Consensus 84 ~~-~Dsg~Y~C~~~~~~~ 100 (114)
T 1u9k_A 84 QV-TDSGLYRCVIYHPPN 100 (114)
T ss_dssp CG-GGCEEEEEEEECTTS
T ss_pred Ch-HHCEEEEEEEecCCC
Confidence 98 999999999987653
No 477
>3mbe_C I-AG7; T cell receptor, histocompatability antigen, MHC class II, I immune system; HET: NAG; 2.89A {Mus musculus}
Probab=98.70 E-value=1e-06 Score=49.53 Aligned_cols=76 Identities=20% Similarity=0.305 Sum_probs=52.9
Q ss_pred eEEcCcceeeecCCcEEEEEEEeccCCCeEEEEEC--CeeccC---------CCCceEEEe-CCCCCeEEEEccCCCCCC
Q psy2442 13 ITLRPRNQAVKAGGITSFYCIARGDPIPVIQWRKN--GKRVSG---------TQSRYMVQE-FPPGGSLLRIEPVRHARD 80 (111)
Q Consensus 13 ~~~~~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~--~~~~~~---------~~~~~~~~~-~~~~~~~l~~~~~~~~~d 80 (111)
+.+.+..+.+.+|++++|.|...+. ...+.|++. +..+.. ...|+.... .......|.|.+++. +|
T Consensus 4 V~Q~p~~v~v~~G~sVtL~C~~s~~-~~~v~Wyrq~pg~~~~~l~~~~~~~~~~~Rfs~~~~~~~~~~sLtI~~lq~-~D 81 (229)
T 3mbe_C 4 VEQNPPALSLYEGADSGLRCNFSTT-MKSVQWFQQNHRGRLITLFYLAQGTKENGRLKSTFNSKERYSTLHIKDAQL-ED 81 (229)
T ss_dssp EEEECSEEEEETTCCEEEEEEESSC-CSCEEEEEECSSSCBCCCEEESSEEEEETTEEEEEETTTTEEEEEECSCCS-TT
T ss_pred EEEcCCEEEEEcCCCEEEEEEEeCC-CcEEEEEEECCCCCcEEEEEeCCCCccCCCEEEEECCCCCEEEEEEECCcc-cC
Confidence 3456667889999999999998776 568999974 222110 123454432 122335599999998 99
Q ss_pred CeEEEEEeee
Q psy2442 81 DAVYECVAEN 90 (111)
Q Consensus 81 ~g~y~c~~~~ 90 (111)
+|.|.|.+..
T Consensus 82 SG~Y~Ca~~~ 91 (229)
T 3mbe_C 82 SGTYFCAAED 91 (229)
T ss_dssp CBEEEEEEEC
T ss_pred CCCEEEEEEe
Confidence 9999999875
No 478
>3bdb_A Novel immune-type receptor 11; immunoglobulin variable domain-like beta-sandwich, stalk region, immune system; 2.80A {Ictalurus punctatus}
Probab=98.70 E-value=8.1e-08 Score=49.86 Aligned_cols=88 Identities=18% Similarity=0.193 Sum_probs=56.3
Q ss_pred cCcceeeecCCcEEEEEEEe-ccCCCeEEEEECC--ee---c---c--C--------C-CCceEEEeCCCCCeEEEEccC
Q psy2442 16 RPRNQAVKAGGITSFYCIAR-GDPIPVIQWRKNG--KR---V---S--G--------T-QSRYMVQEFPPGGSLLRIEPV 75 (111)
Q Consensus 16 ~~~~~~~~~g~~~~l~c~~~-~~~~~~~~w~~~~--~~---~---~--~--------~-~~~~~~~~~~~~~~~l~~~~~ 75 (111)
.+..+.+.+|++++|.|... +.....+.|++.. .. + . . . ..|+...... ....|.|.++
T Consensus 5 ~p~~v~v~~G~~vtL~C~~s~~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~~~~~~~Rf~~~~~~-~~~~L~I~~~ 83 (137)
T 3bdb_A 5 ELHVKTVKRGENVTMECSMSKVTNKNNLAWYRQSFGKVPQYFVRYYSSNSGYKFAEGFKDSRFSMTVND-QKFDLNIIGA 83 (137)
T ss_dssp BCEECCCCTTCEECCCCBCTTCCCGGGBEEEEECTTBCCEEEEEECSSSSCEEECTTCCCTTEEEEESS-SBEEEEEESC
T ss_pred CCCeEEEcCCCCEEEEeecCCCcCcceEEEEEECCCCCCEEEEEEEcCCCcceecCcccCCcEEEEecC-CEEEEEECCC
Confidence 34556788999999999986 5555579998742 11 1 0 0 0 2455554322 3446999999
Q ss_pred CCCCCCeEEEEEeeeCCCceEeeEEEEEEe
Q psy2442 76 RHARDDAVYECVAENGVGDAVSAEASLTVY 105 (111)
Q Consensus 76 ~~~~d~g~y~c~~~~~~~~~~~~~~~l~~~ 105 (111)
+. +|+|.|.|.+.+...........|.|.
T Consensus 84 ~~-~Dsg~Y~C~~~~~~~~~fg~GT~L~V~ 112 (137)
T 3bdb_A 84 RE-DDGGEYFCGEVEGIIIKFTSGTRLQFE 112 (137)
T ss_dssp CS-TTCEEEEEEEECSSCEEEEEEEEECCC
T ss_pred CH-HHCEEEEEEEccCCeEEECCCEEEEEE
Confidence 98 999999999887532212233445444
No 479
>3qjh_A 5C.C7 alpha chain; immunoglobulin domain, T cell receptor, immune system; 1.90A {Mus musculus} PDB: 3qiu_C* 3qiw_C* 3qjf_A 3qib_C 2ial_A 2iam_C 2ian_D 4e41_D 4e42_A 3rug_E* 3axl_A
Probab=98.69 E-value=3.6e-07 Score=50.59 Aligned_cols=76 Identities=18% Similarity=0.289 Sum_probs=52.4
Q ss_pred eEEcCcceeeecCCcEEEEEEEeccCCCeEEEEECC--eecc---------CCCCceEEEe-CCCCCeEEEEccCCCCCC
Q psy2442 13 ITLRPRNQAVKAGGITSFYCIARGDPIPVIQWRKNG--KRVS---------GTQSRYMVQE-FPPGGSLLRIEPVRHARD 80 (111)
Q Consensus 13 ~~~~~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~~--~~~~---------~~~~~~~~~~-~~~~~~~l~~~~~~~~~d 80 (111)
+.+.+..+.+.+|++++|.|...+. ...+.|++.. ..+. ....|+.... .......|.|.+++. +|
T Consensus 6 V~Q~p~~v~v~~G~svtL~C~~s~~-~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~Rfs~~~~~~~~~~sL~I~~l~~-~D 83 (205)
T 3qjh_A 6 VEQSPSALSLHEGTGSALRCNFTTT-MRAVQWFRKNSRGSLINLFYLASGTKENGRLKSAFDSKERYSTLHIRDAQL-ED 83 (205)
T ss_dssp BEEECSEEEEETTCCEEEEEECSSC-EEEEEEEEEC-CCCEEEEEEESSEEEEETTEEEEEETTTTEEEEEECSCCG-GG
T ss_pred EEEeCCEEEEeCCCCEEEEEEEECC-cceEEEEEECCCCCcEEEEEECCCCccCCCEEEEEcCCCCEEEEEEecccc-cc
Confidence 4456667889999999999998766 4578999853 1110 0124554432 122345599999998 99
Q ss_pred CeEEEEEeee
Q psy2442 81 DAVYECVAEN 90 (111)
Q Consensus 81 ~g~y~c~~~~ 90 (111)
+|.|.|.+..
T Consensus 84 sG~Y~Cav~~ 93 (205)
T 3qjh_A 84 SGTYFCAAEA 93 (205)
T ss_dssp CEEEEEEEEE
T ss_pred CeEEEEEEEc
Confidence 9999999873
No 480
>1dee_B IGM RF 2A2; FAB-IBP complex 2.7A resolution binding outside the antigen combining site superantigen FAB VH3 specificity; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1hez_B 1adq_H
Probab=98.69 E-value=9.3e-07 Score=49.17 Aligned_cols=85 Identities=15% Similarity=0.259 Sum_probs=51.5
Q ss_pred eEEecC----CCeeEEcCcceeeecCCcEEEEEEEecc-CCC-eEEEEE-CCeeccCC--------CCceEEEeCCCCCe
Q psy2442 4 KVRFLD----PPEITLRPRNQAVKAGGITSFYCIARGD-PIP-VIQWRK-NGKRVSGT--------QSRYMVQEFPPGGS 68 (111)
Q Consensus 4 ~l~v~~----~p~~~~~~~~~~~~~g~~~~l~c~~~~~-~~~-~~~w~~-~~~~~~~~--------~~~~~~~~~~~~~~ 68 (111)
+|.|.. +|.+........+..|+.++|.|.+.+. |.+ .+.|++ +|..+... ...+.. ..
T Consensus 116 ~L~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~~g~~l~~~~~~~~~~~~~~~~~------~s 189 (223)
T 1dee_B 116 LVTVSSGSASAPTLFPLVSCENSNPSSTVAVGCLAQDFLPDSITFSWKYKNNSDISSTRGFPSVLRGGKYAA------TS 189 (223)
T ss_dssp EEEECSSCCBCCEEEEEECTTCCCSSSEEEEEEEEEEEBSSCCEEEEEETTSCBCSCEEECCCEEETTEEEE------EE
T ss_pred EEEEccCCCCCCEEEEecCCcccCCCCcEEEEEEEEEEeCCCeEEEeEccCCCccceeEECCccccCCeEEE------EE
Confidence 566653 3444322111234689999999999886 666 899999 77765420 011111 12
Q ss_pred EEEEccCCC-CCCCeEEEEEeeeCCCc
Q psy2442 69 LLRIEPVRH-ARDDAVYECVAENGVGD 94 (111)
Q Consensus 69 ~l~~~~~~~-~~d~g~y~c~~~~~~~~ 94 (111)
.|.+..... ..|.|.|.|.+.|..+.
T Consensus 190 ~L~i~~~~~~~~d~g~y~C~v~n~~~~ 216 (223)
T 1dee_B 190 QVLLPSKDVAQGTNEHVVCKVQHPNGN 216 (223)
T ss_dssp EEEEECTTTTSTTCCEEEEEEECTTCC
T ss_pred EEEEcHHHhccCCCCEEEEEEEeCCCC
Confidence 255554431 03579999999998765
No 481
>3gsn_A RA14 TCR alpha chain (TRAV24, TRAJ49); HLA, human cytomegalovirus, PP65, T cell receptor (TCR), immune response, public response; 2.80A {Homo sapiens}
Probab=98.68 E-value=1.5e-07 Score=51.86 Aligned_cols=76 Identities=22% Similarity=0.333 Sum_probs=51.0
Q ss_pred EEcCcceeeecCCcEEEEEEEeccCCCeEEEEEC--Ceecc------C-----CCCceEEEe-CCCCCeEEEEccCCCCC
Q psy2442 14 TLRPRNQAVKAGGITSFYCIARGDPIPVIQWRKN--GKRVS------G-----TQSRYMVQE-FPPGGSLLRIEPVRHAR 79 (111)
Q Consensus 14 ~~~~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~--~~~~~------~-----~~~~~~~~~-~~~~~~~l~~~~~~~~~ 79 (111)
.+.+..+.+.+|++++|.|...+.....+.|++. +..+. . ...|+.... .......|.|.+++. +
T Consensus 4 ~Q~p~~v~v~~G~svtL~C~~s~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~Rfs~~~~~~~~~~sL~I~~l~~-~ 82 (199)
T 3gsn_A 4 EQSPQSLHVQEGDSTNFTCSFPSSNFYALHWYRWETAKSPEALFVMTLNGDEKKKGRISATLNTKEGYSYLYIKGSQP-E 82 (199)
T ss_dssp EEECSEEEEETTCCCEEEEECCCTTCCCEEEEEECTTSCCEEEEEECSTTCCCEETTEECCCBTTTTEEEEEBSSCCG-G
T ss_pred EECCCEEEEeCCCCEEEEEEEcCCCCCEEEEEEECCCCCcEEEEEECCCCCccccCceEEEECCCCCEEEEEEccCcc-c
Confidence 4556667899999999999987755568999974 22110 0 013443321 111234588999998 9
Q ss_pred CCeEEEEEeee
Q psy2442 80 DDAVYECVAEN 90 (111)
Q Consensus 80 d~g~y~c~~~~ 90 (111)
|+|.|.|.+..
T Consensus 83 DsG~Y~Ca~~~ 93 (199)
T 3gsn_A 83 DSATYLCARNT 93 (199)
T ss_dssp GCEEEEEEEES
T ss_pred CCccEEEEEcc
Confidence 99999999864
No 482
>1jtp_A Single-domain antibody; immunoglobulin, heavy chain antibody, VHH, interface, binding, antibody, hydrolase; 1.90A {Camelus dromedarius} SCOP: b.1.1.1 PDB: 1jto_A 1mel_A 2x89_A
Probab=98.67 E-value=2.5e-06 Score=44.85 Aligned_cols=73 Identities=22% Similarity=0.407 Sum_probs=49.6
Q ss_pred cceeeecCCcEEEEEEEecc--CCCeEEEEECC--eec------cC----------CCCceEEEeCC-CCCeEEEEccCC
Q psy2442 18 RNQAVKAGGITSFYCIARGD--PIPVIQWRKNG--KRV------SG----------TQSRYMVQEFP-PGGSLLRIEPVR 76 (111)
Q Consensus 18 ~~~~~~~g~~~~l~c~~~~~--~~~~~~w~~~~--~~~------~~----------~~~~~~~~~~~-~~~~~l~~~~~~ 76 (111)
..+.+.+|++++|.|...+. ....+.|++.. ..+ .. ...|+...... .....|.|.+++
T Consensus 8 ~~~~v~~G~svtL~C~~s~~~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~~~~~~Rfs~~~~~~~~~~sL~I~~~~ 87 (148)
T 1jtp_A 8 GGGSVQAGGSLRLSCAASGYTIGPYCMGWFRQAPGKEREGVAAINMGGGITYYADSVKGRFTISQDNAKNTVYLLMNSLE 87 (148)
T ss_dssp CCEEEETTCCEEEEEEEESCSSCCSEEEEEEECTTSCCEEEEEEETTTCCEEECGGGTTTEEEEECCTTSEEEEEECSCC
T ss_pred CCEEEecCCCEEEEEEEeCccCCCCEEEEEEECCCCCcEEEEEEECCCCceeeCCccCCcEEEEEcCCCCEEEEEECcCC
Confidence 34678899999999998753 24579998742 111 00 12456555322 133459999999
Q ss_pred CCCCCeEEEEEeeeC
Q psy2442 77 HARDDAVYECVAENG 91 (111)
Q Consensus 77 ~~~d~g~y~c~~~~~ 91 (111)
. +|+|.|.|.+.+.
T Consensus 88 ~-~Dsg~Y~C~~~~~ 101 (148)
T 1jtp_A 88 P-EDTAIYYCAADST 101 (148)
T ss_dssp G-GGCEEEEEEEECC
T ss_pred h-hHCEEEEEEEEcC
Confidence 8 9999999998763
No 483
>4fmk_A Poliovirus receptor-related protein 2; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA MAN FUC; 2.56A {Mus musculus} PDB: 4fn0_A* 4fs0_A*
Probab=98.67 E-value=6.5e-07 Score=49.16 Aligned_cols=99 Identities=16% Similarity=0.193 Sum_probs=57.2
Q ss_pred EEecCCCeeEEcCcceeeecCCcEEEEEEE-eccCCCeEEEEECCeeccCCCCceEEEeCCC---CCeEEEEccCCCCCC
Q psy2442 5 VRFLDPPEITLRPRNQAVKAGGITSFYCIA-RGDPIPVIQWRKNGKRVSGTQSRYMVQEFPP---GGSLLRIEPVRHARD 80 (111)
Q Consensus 5 l~v~~~p~~~~~~~~~~~~~g~~~~l~c~~-~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~---~~~~l~~~~~~~~~d 80 (111)
+.+..++.....+.......+....+.|.. .+.|++.+.|++++...... .......++ ..+.|.|..+.. .|
T Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~P~~~~~w~~~~~~~~~~--~~~~~~~~~~~~~~s~L~i~~~~~-~d 192 (225)
T 4fmk_A 116 LRVIAQPENHAEAQEVTIGPQSVAVARCVSTGGRPPARITWISSLGGEAKD--TQEPGIQAGTVTIISRYSLVPVGR-AD 192 (225)
T ss_dssp EEEEBCCEEEEEECCBCCSSSCEEEEEEEEEEEBSCCEEEEECSSCCEEEE--EEEECSSTTCEEEEEEEEECCCGG-GT
T ss_pred eeeecCCceeecccceeecceeeeeeeeeecCCCCCCEEEEEECCccccCC--cceEEecCCCEEEEEEEEEeeCCH-HH
Confidence 334445554444444445566677776665 55677789998876543211 000100010 113488888888 99
Q ss_pred CeEEEEEeeeCCCce-EeeEEEEEEec
Q psy2442 81 DAVYECVAENGVGDA-VSAEASLTVYE 106 (111)
Q Consensus 81 ~g~y~c~~~~~~~~~-~~~~~~l~~~~ 106 (111)
.|.|.|.+.|..+.. ....+.|.|.+
T Consensus 193 ~g~YtC~a~N~~~~~~~~~~v~l~V~Y 219 (225)
T 4fmk_A 193 GVKVTCRVEHESFEEPILLPVTLSVRY 219 (225)
T ss_dssp TCEEEEEEECTTCSSCEEEEEECCBTT
T ss_pred CCEEEEEEEcCCCCeEEEEEEEEEEEE
Confidence 999999999987643 23444554443
No 484
>1oga_E TRBC1, T-cell receptor beta chain C region; immune system/receptor, immune system/receptor/complex, TCR, MHC, immunodominance, FLU, complex; 1.40A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 2vlm_E 2vlk_E 2vlj_E 2vlr_E 2xna_B 2xn9_B 2axh_A 2axj_A 3scm_D* 3sda_D* 3sdc_D* 3sdd_D* 3qi9_D* 3mff_B* 2ak4_E 3he7_D* 2eyr_B 3pqy_E 3kxf_E 2cde_B ...
Probab=98.67 E-value=1.7e-07 Score=53.03 Aligned_cols=77 Identities=18% Similarity=0.297 Sum_probs=53.0
Q ss_pred eEEcCcceeeecCCcEEEEEEEeccCCCeEEEEECC--e--e-cc-----------CCCCceEEEeCCCCCeEEEEccCC
Q psy2442 13 ITLRPRNQAVKAGGITSFYCIARGDPIPVIQWRKNG--K--R-VS-----------GTQSRYMVQEFPPGGSLLRIEPVR 76 (111)
Q Consensus 13 ~~~~~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~~--~--~-~~-----------~~~~~~~~~~~~~~~~~l~~~~~~ 76 (111)
+.+.+..+.+..|+++.|.|... .+.+.+.|++.. . . +. ....|+...........|.|.++.
T Consensus 6 v~q~p~~v~v~~G~~v~L~C~~~-~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~R~~~~~~~~~~~~L~I~~v~ 84 (252)
T 1oga_E 6 ITQSPKYLFRKEGQNVTLSCEQN-LNHDAMYWYRQDPGQGLRLIYYSQIVNDFQKGDIAEGYSVSREKKESFPLTVTSAQ 84 (252)
T ss_dssp EECSCSEEEEETTCCEEECCEEC-SCCSEEEEEEECTTCCEEEEEEESSTTCCEECSSCTTEEECCSSTTBCCEEECSCC
T ss_pred ceEcCCeEEEcCCCcEEEEEEeC-CCCCEEEEEEECCCCCeEEEEEEccCccccCCccCCcEEEEecCCCEEEEEECcCC
Confidence 44556667899999999999985 346789999852 1 1 10 012455543211123459999999
Q ss_pred CCCCCeEEEEEeeeC
Q psy2442 77 HARDDAVYECVAENG 91 (111)
Q Consensus 77 ~~~d~g~y~c~~~~~ 91 (111)
. .|+|.|.|.+.+.
T Consensus 85 ~-~D~G~Y~C~~~~~ 98 (252)
T 1oga_E 85 K-NPTAFYLCASSSR 98 (252)
T ss_dssp S-CCCEEEEEEEESS
T ss_pred h-hhCEEEEEEEecC
Confidence 8 9999999999875
No 485
>1igt_B IGG2A intact antibody - MAB231; intact immunoglobulin V region C region, immunoglobulin; HET: NAG FUL BMA MAN GAL FUC; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=98.67 E-value=1.1e-07 Score=57.77 Aligned_cols=84 Identities=15% Similarity=0.194 Sum_probs=55.3
Q ss_pred CCee-EEcCccee-eecCCcEEEEEEEeccC----CCeEEEEECCeeccCCCCceEEEeCCC---CCeEEEEccCCCCCC
Q psy2442 10 PPEI-TLRPRNQA-VKAGGITSFYCIARGDP----IPVIQWRKNGKRVSGTQSRYMVQEFPP---GGSLLRIEPVRHARD 80 (111)
Q Consensus 10 ~p~~-~~~~~~~~-~~~g~~~~l~c~~~~~~----~~~~~w~~~~~~~~~~~~~~~~~~~~~---~~~~l~~~~~~~~~d 80 (111)
+|.+ ...+.... +..|+.+.|.|.+.+.+ .+.+.|++++..+............++ ....|.|.++.. .|
T Consensus 238 ~p~v~~~~p~~~~~~~~G~~~~L~C~~~g~~~~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~-~d 316 (444)
T 1igt_B 238 GPSVFIFPPKIKDVLMISLSPIVTCVVVDVSEDDPDVQISWFVNNVEVHTAQTQTHREDYNSTLRVVSALPIQHQDW-MS 316 (444)
T ss_dssp CCEEEEECCCHHHHHCTTSCCEEEEEEEEECTTCCCCEEEEEETTEECSSTTCBCCEEECSSSEEEEEEEECCHHHH-HT
T ss_pred CceEEecCCchhheeecCCCcEEEEEEeecccCCCCeEEEEEECCccccCcccccceeCCCCcEEEEEEEEEcHHHh-cc
Confidence 4554 33333322 47899999999998874 358999999988753211111111010 123488888887 99
Q ss_pred CeEEEEEeeeCCCc
Q psy2442 81 DAVYECVAENGVGD 94 (111)
Q Consensus 81 ~g~y~c~~~~~~~~ 94 (111)
.|.|.|.+.|..+.
T Consensus 317 ~G~Y~C~a~n~~~~ 330 (444)
T 1igt_B 317 GKEFKCKVNNKDLP 330 (444)
T ss_dssp TCEEEEEEECTTCS
T ss_pred CCcEEEEEEcCCCC
Confidence 99999999998764
No 486
>3nl4_H Antigen binding fragment,immunoglobulin IGG - HEA; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_H
Probab=98.67 E-value=1.6e-08 Score=55.84 Aligned_cols=85 Identities=9% Similarity=0.150 Sum_probs=45.7
Q ss_pred eEEec----CCCeeEEcCcceeeecCCcEEEEEEEeccCCC--eEEEEECCeeccCCCCceEEEeCCCCCeEEEE---cc
Q psy2442 4 KVRFL----DPPEITLRPRNQAVKAGGITSFYCIARGDPIP--VIQWRKNGKRVSGTQSRYMVQEFPPGGSLLRI---EP 74 (111)
Q Consensus 4 ~l~v~----~~p~~~~~~~~~~~~~g~~~~l~c~~~~~~~~--~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~---~~ 74 (111)
+|.|. .+|.+...+....+..|+.++|.|.+.+.+++ .+.|++++..+........ .. ....+.+ ..
T Consensus 110 ~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~l~C~~~~~~p~~~~v~W~~~g~~~~~~~~~~~-~~---~~g~~~~~s~l~ 185 (215)
T 3nl4_H 110 LVTVSSGQPKAPSVFPLAPCCGDTPSSTVTLGCLVKGYLPEPVTVTWNSGTLTNGVRTFPSV-RQ---SSGLYSLSSVVS 185 (215)
T ss_dssp EEEECSSCCBCCEEEEECCCTTCCC--CEEEEEEEEEEBSSCCEEEEGGGTBCTTEEECCCE-EC---TTSCEEEEEEEE
T ss_pred EEEEeCCCcCCCEEEEecCCccccCCCcEEEEEEEeeeeCCCeEEEEeeCCEECCeEecCce-EC---CCCCEEEEEEEE
Confidence 45665 35555423322345679999999999886543 5779988764421111111 11 1111222 34
Q ss_pred CCCCCCCeEEEEEeeeCCCc
Q psy2442 75 VRHARDDAVYECVAENGVGD 94 (111)
Q Consensus 75 ~~~~~d~g~y~c~~~~~~~~ 94 (111)
+.. .| |.|.|.+.|..+.
T Consensus 186 v~~-~d-g~ytC~v~~~~~~ 203 (215)
T 3nl4_H 186 VTS-SS-QPVTCNVAHPATN 203 (215)
T ss_dssp ECC-----CCEEEEEEGGGT
T ss_pred Eec-cC-CEEEEEEEeCCCC
Confidence 555 77 9999999998765
No 487
>2yc1_A Single chain antibody fragment 9004G; immune system-toxin complex, scorpion toxin; 1.90A {Homo sapiens} PDB: 2ybr_A 1dql_H 3cfi_C
Probab=98.65 E-value=5.7e-07 Score=45.23 Aligned_cols=74 Identities=20% Similarity=0.363 Sum_probs=49.9
Q ss_pred CcceeeecCCcEEEEEEEeccC--CCeEEEEECC--eec------cC----------CCCceEEEeCC-CCCeEEEEccC
Q psy2442 17 PRNQAVKAGGITSFYCIARGDP--IPVIQWRKNG--KRV------SG----------TQSRYMVQEFP-PGGSLLRIEPV 75 (111)
Q Consensus 17 ~~~~~~~~g~~~~l~c~~~~~~--~~~~~w~~~~--~~~------~~----------~~~~~~~~~~~-~~~~~l~~~~~ 75 (111)
+..+.+.+|++++|.|...+.. ...+.|++.. ..+ .. ...|+...... .....|.|.++
T Consensus 7 p~~~~~~~G~~vtL~C~~~~~~~~~~~v~Wyrq~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~~ 86 (117)
T 2yc1_A 7 SGGGLVQPGGSLRLSCTGSGFTFDNYAMHWLRQVPGEGLEWVSGISRSSGDIDYADSVKGRFTISRDDAKKTLSLQMNSL 86 (117)
T ss_dssp ECCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECGGGCCEEECGGGTTTEEEEEETTTTEEEEEECSC
T ss_pred CCCEEEcCCCeEEEEEEecCcccCCCeEEEEEECCCCCcEEEEEEccCCCceeeCcccCCeEEEEEeCCCCEEEEEECCC
Confidence 3346788999999999987532 4579998742 111 00 12355554321 23345999999
Q ss_pred CCCCCCeEEEEEeeeC
Q psy2442 76 RHARDDAVYECVAENG 91 (111)
Q Consensus 76 ~~~~d~g~y~c~~~~~ 91 (111)
+. +|+|.|.|.+.+.
T Consensus 87 ~~-~Dsg~Y~C~~~~~ 101 (117)
T 2yc1_A 87 RA-EDTAVYYCARGGV 101 (117)
T ss_dssp CG-GGCEEEEEEEEET
T ss_pred CH-HHCEEEEEEEEeC
Confidence 98 9999999998764
No 488
>4ei6_A Valpha1 XV19 type II natural killer T cell recept variable domain, human constant...; natural killer T cell receptor, immune system; 1.60A {Mus musculus} PDB: 4ei5_C 4elk_A 4elm_E* 3qeu_A 1ao7_D 3qdj_D 3qdg_D 3qfj_D 1qsf_D 1qse_D* 3d39_D* 3d3v_D* 3h9s_D 3pwp_D 2gj6_D 3utp_D* 3uts_D 1qrn_D 3hg1_D 3rdt_A ...
Probab=98.65 E-value=4.9e-07 Score=50.14 Aligned_cols=77 Identities=19% Similarity=0.383 Sum_probs=52.2
Q ss_pred eEEcCcceeeecCCcEEEEEEEeccCCCeEEEEECC--eecc------C----CCCceEEEeC-CCCCeEEEEccCCCCC
Q psy2442 13 ITLRPRNQAVKAGGITSFYCIARGDPIPVIQWRKNG--KRVS------G----TQSRYMVQEF-PPGGSLLRIEPVRHAR 79 (111)
Q Consensus 13 ~~~~~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~~--~~~~------~----~~~~~~~~~~-~~~~~~l~~~~~~~~~ 79 (111)
+.+.+..+.+.+|++++|.|...+.....+.|++.. ..+. . ...|+..... ......|.|.+++. +
T Consensus 5 V~Q~p~~v~v~~G~sVtL~C~~s~~~~~~v~Wyrq~~g~~~~~li~~~~~~~~~~~Rfs~~~~~~~~~~sL~I~~lq~-~ 83 (208)
T 4ei6_A 5 VQQSPESLSVPEGGMASLNCTSSDRNFQYFWWYRQHSGEGPKALMSIFSDGDKKEGRFTAHLNKASLHVSLHIRDSQP-S 83 (208)
T ss_dssp EEEECSEEEEETTCCEECEEEECCTTEEEEEEEEECTTSCCEEEEECCSSEEEEETTEEEEEBTTTTBC-CEECSCCG-G
T ss_pred EEEeCCEEEEECCCCEEEEEEEcCCCCceEEEEEeCCCCCcEEEEEECCCCcccCCcEEEEEcCCCCEEEEEEEeCcc-c
Confidence 456667788999999999999877544578999742 1110 0 1245544321 22334589999998 9
Q ss_pred CCeEEEEEeee
Q psy2442 80 DDAVYECVAEN 90 (111)
Q Consensus 80 d~g~y~c~~~~ 90 (111)
|+|.|.|.+..
T Consensus 84 DsG~Y~Ca~~~ 94 (208)
T 4ei6_A 84 DSALYFCAASE 94 (208)
T ss_dssp GCEEEEEEEEE
T ss_pred CCCcEEEEEec
Confidence 99999999864
No 489
>2bnu_A TCR alpha chain, T-cell receptor alpha chain C region; superagonist peptide T-cell vaccines, transmembrane, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 2bnq_D 2bnr_D 2f54_D 2pyf_A* 2pye_D* 2f53_D 2p5e_D* 2p5w_D* 3mv7_D 3mv8_D 3mv9_D 3utt_D 2cdg_A
Probab=98.65 E-value=3.7e-07 Score=50.35 Aligned_cols=77 Identities=25% Similarity=0.321 Sum_probs=52.8
Q ss_pred EEcCcceeeecCCcEEEEEEEeccCCCeEEEEECC--ee---c---cC-----CCCceEEEeC-CCCCeEEEEccCCCCC
Q psy2442 14 TLRPRNQAVKAGGITSFYCIARGDPIPVIQWRKNG--KR---V---SG-----TQSRYMVQEF-PPGGSLLRIEPVRHAR 79 (111)
Q Consensus 14 ~~~~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~~--~~---~---~~-----~~~~~~~~~~-~~~~~~l~~~~~~~~~ 79 (111)
.+.+..+.+..|++++|.|...+.....+.|++.. .. + .. ...|+..... ......|.|.+++. +
T Consensus 4 ~q~p~~v~v~~G~~v~L~C~~s~~~~~~v~W~rq~~g~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~-~ 82 (203)
T 2bnu_A 4 TQIPAALSVPEGENLVLNCSFTDSAIYNLQWFRQDPGKGLTSLLLIQSSQREQTSGRLNASLDKSSGRSTLYIAASQP-G 82 (203)
T ss_dssp EEECSEEEEETTCCEEEEEEESCCCEEEEEEEEECTTSCEEEEEEEETTCSEEEETTEEEEEETTTTEEEEEESSCCG-G
T ss_pred EEcCCEEEEeCCCCEEEEEEECCCCcceEEEEEeCCCCCcEEEEEECCCCccccCCCeEEEEcCCCCEEEEEEeeCCc-c
Confidence 45566778999999999999876554579998742 11 1 00 1245554321 11334599999998 9
Q ss_pred CCeEEEEEeeeC
Q psy2442 80 DDAVYECVAENG 91 (111)
Q Consensus 80 d~g~y~c~~~~~ 91 (111)
|+|.|.|.+.+.
T Consensus 83 Dsg~Y~C~~~~~ 94 (203)
T 2bnu_A 83 DSATYLCAVRPT 94 (203)
T ss_dssp GCEEEEEEEEEC
T ss_pred cCeEEEEEEEcC
Confidence 999999998763
No 490
>1n4x_H Immunoglobulin heavy chain variable region; immune system; 1.70A {Mus musculus} SCOP: b.1.1.1 PDB: 3iy4_B
Probab=98.65 E-value=6.4e-07 Score=45.27 Aligned_cols=74 Identities=20% Similarity=0.350 Sum_probs=49.6
Q ss_pred CcceeeecCCcEEEEEEEeccC--CCeEEEEECCe--e---c---c----------CCCCceEEEeCC-CCCeEEEEccC
Q psy2442 17 PRNQAVKAGGITSFYCIARGDP--IPVIQWRKNGK--R---V---S----------GTQSRYMVQEFP-PGGSLLRIEPV 75 (111)
Q Consensus 17 ~~~~~~~~g~~~~l~c~~~~~~--~~~~~w~~~~~--~---~---~----------~~~~~~~~~~~~-~~~~~l~~~~~ 75 (111)
+..+.+..|++++|.|...+.. ...+.|++... . + . ....|+...... .....|.|.++
T Consensus 7 p~~~~~~~G~~vtL~C~~~~~~~~~~~v~Wyrq~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~~ 86 (120)
T 1n4x_H 7 SGPELKKPGETVKISCKATNYAFTDYSMHWVKQAPGGDLKYVGWINTETDEPTFADDFKGRFAFSLDTSTSTAFLQINNL 86 (120)
T ss_dssp CCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEEETTTTEEEECTTTTTTEEEEEEGGGTEEEEEECSC
T ss_pred CCCEEEcCCCeEEEEEEecCcccCCcEEEEEEECCCCCcEEEEEEecCCCccccCcccCCcEEEEEeCCCCEEEEEECCC
Confidence 3346888999999999987532 45799987431 1 1 0 012455554221 13345999999
Q ss_pred CCCCCCeEEEEEeeeC
Q psy2442 76 RHARDDAVYECVAENG 91 (111)
Q Consensus 76 ~~~~d~g~y~c~~~~~ 91 (111)
+. +|+|.|.|.+.+.
T Consensus 87 ~~-~DsG~Y~C~~~~~ 101 (120)
T 1n4x_H 87 KN-EDTATYFCVRDRH 101 (120)
T ss_dssp CG-GGCEEEEEEEESS
T ss_pred CH-HHCEEEEEEEEcc
Confidence 98 9999999998764
No 491
>2nw2_A ELS4 TCR alpha chain; T cell receptor, immune system; 1.40A {Homo sapiens} PDB: 2nx5_D 4dzb_A
Probab=98.65 E-value=6.6e-07 Score=49.30 Aligned_cols=73 Identities=18% Similarity=0.360 Sum_probs=49.9
Q ss_pred CcceeeecCCcEEEEEEEeccCCCeEEEEECC--ee---c-cCC------CCceEEEeC-CCCCeEEEEccCCCCCCCeE
Q psy2442 17 PRNQAVKAGGITSFYCIARGDPIPVIQWRKNG--KR---V-SGT------QSRYMVQEF-PPGGSLLRIEPVRHARDDAV 83 (111)
Q Consensus 17 ~~~~~~~~g~~~~l~c~~~~~~~~~~~w~~~~--~~---~-~~~------~~~~~~~~~-~~~~~~l~~~~~~~~~d~g~ 83 (111)
+..+.+.+|++++|.|...+.....+.|++.. .. + ... ..|+..... ......|.|.+++. +|+|.
T Consensus 6 p~~~~v~~G~~vtL~C~~s~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~Rf~~~~~~~~~~~~L~I~~~~~-~Dsg~ 84 (200)
T 2nw2_A 6 PTEMTATEGAIVQINCTYQTSGFNGLFWYQQHAGEAPTFLSYNVLDGLEEKGRFSSFLSRSKGYSYLLLKELQM-KDSAS 84 (200)
T ss_dssp CSEEEEETTCCEEEEEECCCSSCCCEEEEEECTTSCCEEEEEECSSEEEEETTEEEEEETTTTEEEEEECSCCG-GGCEE
T ss_pred CCeEEEccCCCEEEEEEECCCCCceEEEEEeCCCCCcEEEEEEcCCCcccCCceEEEecCCCCEEEEEECccCc-ccCCc
Confidence 55678899999999999876655689998743 11 1 000 245544321 21334599999998 99999
Q ss_pred EEEEeee
Q psy2442 84 YECVAEN 90 (111)
Q Consensus 84 y~c~~~~ 90 (111)
|.|.+.+
T Consensus 85 Y~C~~~~ 91 (200)
T 2nw2_A 85 YLCAVQA 91 (200)
T ss_dssp EEEEEC-
T ss_pred EEEEEEc
Confidence 9999865
No 492
>1iga_A IGA1; immunoglobulin; NMR {Homo sapiens} PDB: 2esg_A 2qtj_A 3chn_A 1r70_B 3cm9_A
Probab=98.64 E-value=1.2e-06 Score=53.79 Aligned_cols=78 Identities=19% Similarity=0.328 Sum_probs=53.6
Q ss_pred EcCcceeeecCCcEEEEEEEeccC--CCeEEEEECC--eecc----------------CCCCceEEEeCC-CCCeEEEEc
Q psy2442 15 LRPRNQAVKAGGITSFYCIARGDP--IPVIQWRKNG--KRVS----------------GTQSRYMVQEFP-PGGSLLRIE 73 (111)
Q Consensus 15 ~~~~~~~~~~g~~~~l~c~~~~~~--~~~~~w~~~~--~~~~----------------~~~~~~~~~~~~-~~~~~l~~~ 73 (111)
..+..+.+..|++++|.|...+.+ .+.+.|++.. ..+. ....|+...... .....|.|.
T Consensus 6 ~~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~ 85 (475)
T 1iga_A 6 EQSGAEVKKPGASVKVSCKASGYSFTSYGLHWVRQAPGQRLEWMGWISAGTGNTKYSQKFRGRVTFTRDTSATTAYMGLS 85 (475)
T ss_pred ccCCcEEEeCCCCEEEEEEecCCCCCCceEEEEEeCCCCCcEEEEEEecCCCceecCcccCCceEEEEcCCCCeEEEEEC
Confidence 345567889999999999987754 4589999852 1110 012355444321 123459999
Q ss_pred cCCCCCCCeEEEEEeeeCCC
Q psy2442 74 PVRHARDDAVYECVAENGVG 93 (111)
Q Consensus 74 ~~~~~~d~g~y~c~~~~~~~ 93 (111)
++.. .|+|.|.|.+.+..+
T Consensus 86 ~v~~-~D~G~Y~C~~~~~~~ 104 (475)
T 1iga_A 86 SLRP-EDTAVYYCARDPYGG 104 (475)
T ss_pred CCCh-hhCEEEEEEEeccCC
Confidence 9998 999999999988654
No 493
>1sy6_A T-cell surface glycoprotein CD3 gamma/epsilon chain; CD3 epsilon, OKT3 FAB, signaling protein/antibiotic complex; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 2atp_E*
Probab=98.64 E-value=4e-08 Score=54.14 Aligned_cols=57 Identities=19% Similarity=0.335 Sum_probs=43.6
Q ss_pred eecCCcEEEEEEEeccCCCeEEEEECCeeccCCCCceEEEeCCCCCeEEEEccCCCCCCCeEEEEEeeeC
Q psy2442 22 VKAGGITSFYCIARGDPIPVIQWRKNGKRVSGTQSRYMVQEFPPGGSLLRIEPVRHARDDAVYECVAENG 91 (111)
Q Consensus 22 ~~~g~~~~l~c~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~g~y~c~~~~~ 91 (111)
+..|++++|.|.+ +.+.+.|+++|..+... .. ....|.|..+.. .|+|.|.|.+.+.
T Consensus 15 ~~~G~~v~L~C~~---p~~~i~W~k~g~~l~~~------~~---~~~~L~i~~v~~-~DsG~Y~C~~~~~ 71 (204)
T 1sy6_A 15 YQEDGSVLLTCDA---EAKNITWFKDGKMIGFL------TE---DKKKWNLGSNAK-DPRGMYQCKGSQN 71 (204)
T ss_dssp CCSSSEEEEEECS---CSSEEEEEETTEEEEEE------ES---SCCCEEEEEGGG-CCEEEEEEESSSS
T ss_pred ecCCCeEEEEEcC---CCCEEEEEECCEECCCC------CC---CCCeEEeCCCCc-CCCEEEEEEecCC
Confidence 3579999999988 67799999998876421 00 223488889998 9999999997553
No 494
>3pl6_D MBP peptide / T-cell receptor beta chain chimera; TCR-MHC complex, immunoglobulin fold, immune receptor, membr immune system; HET: NAG; 2.55A {Homo sapiens}
Probab=98.64 E-value=1.4e-07 Score=53.80 Aligned_cols=76 Identities=25% Similarity=0.473 Sum_probs=48.5
Q ss_pred CCeeE-EcCcceeeecCCcEEEEEEEeccCCC--eEEEEECCeeccCC---------------CCceEEEeCCCCCeEEE
Q psy2442 10 PPEIT-LRPRNQAVKAGGITSFYCIARGDPIP--VIQWRKNGKRVSGT---------------QSRYMVQEFPPGGSLLR 71 (111)
Q Consensus 10 ~p~~~-~~~~~~~~~~g~~~~l~c~~~~~~~~--~~~w~~~~~~~~~~---------------~~~~~~~~~~~~~~~l~ 71 (111)
+|.+. ..+....+..|+.++|.|.+.+.+++ .+.|+++|..+... ...+.. ...|.
T Consensus 145 ~P~v~~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~------~s~l~ 218 (268)
T 3pl6_D 145 PPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWVNGKEVHSGVCTDPQPLKEQPALNDSRYSL------SSRLR 218 (268)
T ss_dssp CCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEESSSEECTTEEECSSCEESSTTCTTCCEEE------EEEEE
T ss_pred CCceEEeCCCcccccCCCceEEEEEECcccCCCeEEEEEECCEECCCCeEeccccccccccCCCCcEEE------EEEEE
Confidence 45443 23333345569999999999886654 89999998877432 011111 12255
Q ss_pred EccCCCCCC-CeEEEEEeeeCC
Q psy2442 72 IEPVRHARD-DAVYECVAENGV 92 (111)
Q Consensus 72 ~~~~~~~~d-~g~y~c~~~~~~ 92 (111)
+..... .| .|.|.|.+.|..
T Consensus 219 i~~~~~-~d~~g~YtC~v~~~~ 239 (268)
T 3pl6_D 219 VSATFW-QNPRNHFRCQVQFYG 239 (268)
T ss_dssp EEHHHH-SCTTCEEEEEEEECC
T ss_pred EcHHHh-ccCCCEEEEEEEcCC
Confidence 665554 55 899999999864
No 495
>3fku_X Neutralizing antibody F10; influenza, hemagglutinin, SCFV, F membrane, envelope protein, fusion protein, membrane, trans virion; HET: NAG BMA; 3.20A {Homo sapiens}
Probab=98.64 E-value=2.1e-07 Score=53.58 Aligned_cols=74 Identities=18% Similarity=0.316 Sum_probs=50.9
Q ss_pred CcceeeecCCcEEEEEEEecc--CCCeEEEEECCe--ecc----------------CCCCceEEEeC-CCCCeEEEEccC
Q psy2442 17 PRNQAVKAGGITSFYCIARGD--PIPVIQWRKNGK--RVS----------------GTQSRYMVQEF-PPGGSLLRIEPV 75 (111)
Q Consensus 17 ~~~~~~~~g~~~~l~c~~~~~--~~~~~~w~~~~~--~~~----------------~~~~~~~~~~~-~~~~~~l~~~~~ 75 (111)
+..+.+..|++++|.|...+. +.+.+.|++... .+. ....|+..... ......|.|.++
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v 86 (280)
T 3fku_X 7 SGAEVKKPGSSVKVSCTSSEVTFSSFAISWVRQAPGQGLEWLGGISPMFGTPNYAQKFQGRVTITADQSTRTAYMDLRSL 86 (280)
T ss_dssp CCCCEECTTCCEEEEEEECCSCCTTSCEEECCBCSSSCCCCCEEECTTTCCEEECGGGTTTCEEEEETTTTEEEEEECSC
T ss_pred CCCEEECCCCcEEEEEEeeccCCCCeEEEEEEeCCCCCCEEEEEEeccCCccccCcccCCcEEEEEeCCCCEEEEEECCC
Confidence 556788999999999998775 456899987421 110 00134444421 112345999999
Q ss_pred CCCCCCeEEEEEeeeC
Q psy2442 76 RHARDDAVYECVAENG 91 (111)
Q Consensus 76 ~~~~d~g~y~c~~~~~ 91 (111)
.. .|+|.|.|.+.+.
T Consensus 87 ~~-~DsG~Y~C~~~~~ 101 (280)
T 3fku_X 87 RS-EDTAVYYCARSPS 101 (280)
T ss_dssp CS-TTCEECCEEECSS
T ss_pred Ch-hhCEEEEEEEecC
Confidence 98 9999999999886
No 496
>3liz_H 4C3 monoclonal antibody heavy chain; hydrolase-immune system complex; HET: NAG BMA MAN; 1.80A {Mus musculus} PDB: 3rvv_D* 3rvu_D 3rvt_D* 3rvw_D* 3rvx_D 1lo4_H 1ub6_H 3r06_B 3r08_H
Probab=98.64 E-value=4.7e-07 Score=51.32 Aligned_cols=74 Identities=20% Similarity=0.437 Sum_probs=49.5
Q ss_pred CcceeeecCCcEEEEEEEecc--CCCeEEEEECCe--e---c---c----------CCCCceEEEeCC-CCCeEEEEccC
Q psy2442 17 PRNQAVKAGGITSFYCIARGD--PIPVIQWRKNGK--R---V---S----------GTQSRYMVQEFP-PGGSLLRIEPV 75 (111)
Q Consensus 17 ~~~~~~~~g~~~~l~c~~~~~--~~~~~~w~~~~~--~---~---~----------~~~~~~~~~~~~-~~~~~l~~~~~ 75 (111)
+..+.+..|++++|.|...+. ....+.|++... . + . ....|+.+.... .....|.|.++
T Consensus 7 p~~v~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v 86 (253)
T 3liz_H 7 SGGGLVQPGGSLKLSCAASGFTFSSFAMSWGRQTPDKRLELVATINSNGASTYYPDTVKGRFTISRDNAKNTLFLQMSSL 86 (253)
T ss_dssp ECCCEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEECCTTTTTTCEEEEEGGGTEEEEEECSC
T ss_pred CCCEEECCCCcEEEEEEeeCccccCceEEEEEECCCCCcEEEEEEecCCCccccCcccCCcEEEEEeCCCCEEEEEECCC
Confidence 345678899999999998763 345789987421 1 0 0 112355444211 12344999999
Q ss_pred CCCCCCeEEEEEeeeC
Q psy2442 76 RHARDDAVYECVAENG 91 (111)
Q Consensus 76 ~~~~d~g~y~c~~~~~ 91 (111)
+. .|+|.|.|.+.+.
T Consensus 87 ~~-~DsG~Y~C~~~~~ 101 (253)
T 3liz_H 87 KS-EDTAMYYCTRDPA 101 (253)
T ss_dssp CG-GGCEEEEEEECCB
T ss_pred Ch-hhCEEEEEEEecC
Confidence 98 9999999999875
No 497
>2dru_A Chimera of CD48 antigen and T-cell surface antige; CD2 binding domain of CD48, immune system; HET: NAG; 2.60A {Rattus norvegicus}
Probab=98.63 E-value=2e-07 Score=50.41 Aligned_cols=56 Identities=13% Similarity=0.164 Sum_probs=41.2
Q ss_pred cCCcEEEEEEE-eccCCCeEEEEECCeeccCCCCceEEEeCCCCCeEEEEccCCCCCCCeEEEEEeeeCCCc
Q psy2442 24 AGGITSFYCIA-RGDPIPVIQWRKNGKRVSGTQSRYMVQEFPPGGSLLRIEPVRHARDDAVYECVAENGVGD 94 (111)
Q Consensus 24 ~g~~~~l~c~~-~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~g~y~c~~~~~~~~ 94 (111)
.+..+.|.|.+ .+ |.+.+.|++++..+... ....+.+.. . .|.|.|.|.+.|..+.
T Consensus 114 ~~~~v~L~C~~~~g-p~p~i~W~~~~~~l~~~-----------~~~~l~~~~--~-~d~g~Y~C~a~N~~~~ 170 (180)
T 2dru_A 114 ECSNATLTCEVLEG-TDVELKLYQGKEHLRSL-----------RQKTMSYQW--T-NLRAPFKCKAVNRVSQ 170 (180)
T ss_dssp EGGGTEEEEECSSC-TTCEEEEEETTEEEEEE-----------SSSEEEEEC--S-CCSSCEEEEEEETTEE
T ss_pred cCCCEEEEEEeCCC-CCCEEEEEECCeECcCC-----------CCCEEEEEE--h-hcCccEEEEEecCcCc
Confidence 44678999999 56 88899999998876410 222344432 4 7999999999998865
No 498
>1op3_H FAB 2G12, heavy chain; domain-swapped FAB 2G12, anti-carbohydrate antibody, immune system; HET: MAN; 1.75A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1om3_H* 1op5_H* 3oay_M* 1zlu_H* 1zlv_H* 1zlw_H* 2oqj_B 1zls_H* 3ob0_H* 3oau_H* 3oaz_H* 3ghe_H 3eyf_B 3eyo_B 3ghb_H 3c2a_H 1q1j_H 2fl5_H*
Probab=98.63 E-value=1.1e-07 Score=52.92 Aligned_cols=87 Identities=15% Similarity=0.281 Sum_probs=52.1
Q ss_pred eEEecC----CCeeEE-cCcceeeecCCcEEEEEEEecc-CCC-eEEEEECCeeccCCCCceEEEeCCC---CCeEEEEc
Q psy2442 4 KVRFLD----PPEITL-RPRNQAVKAGGITSFYCIARGD-PIP-VIQWRKNGKRVSGTQSRYMVQEFPP---GGSLLRIE 73 (111)
Q Consensus 4 ~l~v~~----~p~~~~-~~~~~~~~~g~~~~l~c~~~~~-~~~-~~~w~~~~~~~~~~~~~~~~~~~~~---~~~~l~~~ 73 (111)
+|.|.. +|.+.. .+.. .+..|+.++|.|.+.+. |.+ .+.|++++..+....... ....++ ....|.|.
T Consensus 118 ~L~V~~~~~~~P~v~~~~~~~-~~~~g~~v~L~C~~~g~~P~p~~v~W~~~~~~~~~~~~~~-~~~~~g~~~~~s~L~i~ 195 (225)
T 1op3_H 118 VVTVSPASTKGPSVFPLAPSS-KSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPA-VLQSSGLYSLSSVVTVP 195 (225)
T ss_dssp EEEEESCSCBCCEEEEECCCT-TCCCCCEEEEEEEEEEEBSSCCEEECCTTSCCTTCEECCC-EECTTSCEEEEEEEEEE
T ss_pred EEecccCCCcCCeEEEecccc-cccCCCcEEEEEEEEeEECCCeEEEEecCCCcCCeEecCc-eeCCCCCEEEEEEEEEe
Confidence 556654 344432 2222 34679999999999886 666 899999876532100000 000110 11237787
Q ss_pred cCCCCCCCeEEEEEeeeCCCc
Q psy2442 74 PVRHARDDAVYECVAENGVGD 94 (111)
Q Consensus 74 ~~~~~~d~g~y~c~~~~~~~~ 94 (111)
.... .| |.|.|.+.|..+.
T Consensus 196 ~~~~-~~-g~Y~C~a~n~~~~ 214 (225)
T 1op3_H 196 SSSL-GT-QTYICNVNHKPSN 214 (225)
T ss_dssp GGGT-TC-CCCCEEEEEGGGT
T ss_pred chhc-CC-CcEEEEEEcCCCC
Confidence 7776 67 9999999996543
No 499
>1lk2_B Beta-2-microglobulin; class I MHC-peptide complex, high resolution, anisotropic AN refinement, immune system; HET: NAG FUC; 1.35A {Mus musculus} SCOP: b.1.1.2 PDB: 1bqh_B 1cd1_B 1fo0_L* 1fzj_B* 1fzm_B* 1fzo_B* 1g6r_L 1fzk_B* 1g7q_B* 1hoc_B 1inq_B 1juf_B 1k8d_B 1kbg_L* 1kj2_L* 1kj3_L 1kpu_B* 1kpv_B* 1ld9_B 1ldp_L* ...
Probab=98.63 E-value=1.2e-06 Score=43.02 Aligned_cols=81 Identities=19% Similarity=0.247 Sum_probs=47.7
Q ss_pred CCCeeEEcCcceeeecCCcEEEEEEEeccCCC--eEEEEECCeeccCCCCceEEEeCCCCC-eEEEEccCCCCCCCeEEE
Q psy2442 9 DPPEITLRPRNQAVKAGGITSFYCIARGDPIP--VIQWRKNGKRVSGTQSRYMVQEFPPGG-SLLRIEPVRHARDDAVYE 85 (111)
Q Consensus 9 ~~p~~~~~~~~~~~~~g~~~~l~c~~~~~~~~--~~~w~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~~~~~d~g~y~ 85 (111)
.+|.+...+.. ....|+..+|.|.+.+..++ .+.|+++|..+... .........+.. .......+.. .+.+.|.
T Consensus 3 ~~P~V~v~~~~-~~~~~~~~~L~C~~~gfyP~~i~v~W~k~g~~~~~~-~~~~~~~~~dgty~~~s~l~v~~-~~~~~yt 79 (99)
T 1lk2_B 3 KTPQIQVYSRH-PPENGKPNILNCYVTQFHPPHIEIQMLKNGKKIPKV-EMSDMSFSKDWSFYILAHTEFTP-TETDTYA 79 (99)
T ss_dssp BCCEEEEEESS-CCCTTSCEEEEEEEEEEBSSCCEEEEEETTEECTTC-EEEEEEECTTCCEEEEEEEEECC-CSSCCEE
T ss_pred cCCEEEEEcCC-cccCCCCEEEEEEEEEEECCCcEEEEEECCEECCCc-eeCCeEECCCCcEEEEEEEEEeC-CCCCEEE
Confidence 35555543222 23457789999999997655 78999999887421 111122211111 1122224455 6778899
Q ss_pred EEeeeCC
Q psy2442 86 CVAENGV 92 (111)
Q Consensus 86 c~~~~~~ 92 (111)
|.+.+..
T Consensus 80 C~V~H~~ 86 (99)
T 1lk2_B 80 CRVKHDS 86 (99)
T ss_dssp EEEECTT
T ss_pred EEEEcCC
Confidence 9998864
No 500
>3umt_A SCFV heavy chain and light chain; stability engineering, anthrax, anti-BCLA antibody, immunoglobulin fold (VH and VL domains), antibody, immune S; HET: NHE; 1.80A {Mus musculus} PDB: 1xiw_D
Probab=98.62 E-value=5.3e-07 Score=51.06 Aligned_cols=72 Identities=19% Similarity=0.372 Sum_probs=49.2
Q ss_pred ceeeecCCcEEEEEEEeccC--CCeEEEEECC--eecc----------------CCCCceEEEeCC-CCCeEEEEccCCC
Q psy2442 19 NQAVKAGGITSFYCIARGDP--IPVIQWRKNG--KRVS----------------GTQSRYMVQEFP-PGGSLLRIEPVRH 77 (111)
Q Consensus 19 ~~~~~~g~~~~l~c~~~~~~--~~~~~w~~~~--~~~~----------------~~~~~~~~~~~~-~~~~~l~~~~~~~ 77 (111)
.+.+.+|++++|.|...+.+ .+.+.|++.. ..+. ....++...... .....|.|.++..
T Consensus 11 ~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~ 90 (256)
T 3umt_A 11 LELVKPGASVKISCKTSGYTFTEYTMHWVKQSHGKSLEWIGGINPNNGGTSYNQKFKGKAILTVDKSSSTAYLELRSLTS 90 (256)
T ss_dssp CEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTTCCEEECGGGTTTEEEEEEGGGTEEEEEECSCCG
T ss_pred ceEEcCCCCEEEEEEEecccccccEEEEEEECCCCCcEEEEEEeccCCcccccccccceEEEEEecCCCEEEEEECCCCc
Confidence 35688999999999988755 5689998732 1110 011344443211 1234499999998
Q ss_pred CCCCeEEEEEeeeC
Q psy2442 78 ARDDAVYECVAENG 91 (111)
Q Consensus 78 ~~d~g~y~c~~~~~ 91 (111)
.|+|.|.|.+.+.
T Consensus 91 -~DsG~Y~C~~~~~ 103 (256)
T 3umt_A 91 -EDSAVYYCARDDR 103 (256)
T ss_dssp -GGCEEEEEEECCS
T ss_pred -ccCEEEEEEEccC
Confidence 9999999999886
Done!