RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy2442
(111 letters)
>d3dara1 b.1.1.4 (A:153-249) Fibroblast growth factor receptor, FGFR
{Human (Homo sapiens), FGFR2a [TaxId: 9606]}
Length = 97
Score = 70.2 bits (171), Expect = 9e-18
Identities = 27/99 (27%), Positives = 37/99 (37%), Gaps = 5/99 (5%)
Query: 6 RFLDPPEITLRPRNQAVKAGGITSFYCIARGDPIPVIQWRKNGKRVSGTQSRYMVQEFPP 65
+ + ++ R AV A F C A G+P+P ++W KNGK +
Sbjct: 3 YWTNTEKM--EKRLHAVPAANTVKFRCPAGGNPMPTMRWLKNGKEFKQEHRIGGYKVRNQ 60
Query: 66 GGSLLRIEPVRHARDDAVYECVAENGVGDAVSAEASLTV 104
SL I D Y CV EN G + L V
Sbjct: 61 HWSL--IMESVVPSDKGNYTCVVENEYGSI-NHTYHLDV 96
>d1qz1a3 b.1.1.4 (A:190-289) Neural cell adhesion molecule (NCAM)
{Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 100
Score = 65.7 bits (159), Expect = 4e-16
Identities = 28/99 (28%), Positives = 39/99 (39%), Gaps = 4/99 (4%)
Query: 10 PPEITLRPR--NQAVKAGGITSFYCIARGDPIPVIQWRKNGKRVSGTQSRYMVQEFPPGG 67
PP + R N G + C A G P P + W K+G+ + + F
Sbjct: 3 PPTVQARQSIVNATANLGQSVTLVCDADGFPEPTMSWTKDGEPIENEEEDDEKHIFSDDS 62
Query: 68 SLLRIEPVRHARDDAVYECVAENGVGDAVSAEASLTVYE 106
S L I D+A Y C+AEN G+ A L V+
Sbjct: 63 SELTIRN-VDKNDEAEYVCIAENKAGEQ-DASIHLKVFA 99
>d1biha3 b.1.1.4 (A:210-306) Hemolin {Moth (Hyalophora cecropia)
[TaxId: 7123]}
Length = 97
Score = 65.3 bits (158), Expect = 7e-16
Identities = 25/88 (28%), Positives = 38/88 (43%), Gaps = 1/88 (1%)
Query: 17 PRNQAVKAGGITSFYCIARGDPIPVIQWRKNGKRVSGTQSRYMVQEFPPGGSLLRIEPVR 76
++ KAG +T YC+ +P+ + KNGK V+G + + G L +
Sbjct: 10 SKDMMAKAGDVTMIYCMYGSNPMGYPNYFKNGKDVNGNPEDRITRHNRTSGKRLLFKTTL 69
Query: 77 HARDDAVYECVAENGVGDAVSAEASLTV 104
+ VY C +NGVG LTV
Sbjct: 70 PEDEG-VYTCEVDNGVGKPQKHSLKLTV 96
>d2cqva1 b.1.1.4 (A:8-108) Telokin {Human (Homo sapiens) [TaxId:
9606]}
Length = 101
Score = 64.1 bits (155), Expect = 2e-15
Identities = 25/101 (24%), Positives = 40/101 (39%), Gaps = 4/101 (3%)
Query: 11 PEITLRPRNQAVKAGGITSFYCIARGDPIPVIQWRKNGKRVSGTQSRYMVQEFPPGGSLL 70
P+I P +Q V+AG + G W K K++ ++ + GS L
Sbjct: 1 PQIIQFPEDQKVRAGESVELFGKVTGTQPITCTWMKFRKQIQESEHMKVENSEN--GSKL 58
Query: 71 RIEPVRHARDDAVYECVAENGVGDAVSAEASLTVYEGEEKP 111
I R Y + EN +G A+ +LTV + + P
Sbjct: 59 TILAAR-QEHCGCYTLLVENKLGSR-QAQVNLTVVDKPDPP 97
>d1rhfa1 b.1.1.1 (A:7-97) Tyrosine-protein kinase receptor tyro3,
N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 91
Score = 63.8 bits (154), Expect = 2e-15
Identities = 24/88 (27%), Positives = 30/88 (34%), Gaps = 1/88 (1%)
Query: 17 PRNQAVKAGGITSFYCIARGDPIPVIQWRKNGKRVSGTQSRYMVQEFPPGGSLLRIEPVR 76
P V G C G P IQW K+G V Y+ L ++ V
Sbjct: 3 PVKLTVSQGQPVKLNCSVEGMEEPDIQWVKDGAVVQNLDQLYIPVSEQHWIGFLSLKSVE 62
Query: 77 HARDDAVYECVAENGVGDAVSAEASLTV 104
D Y C E+G +S LTV
Sbjct: 63 -RSDAGRYWCQVEDGGETEISQPVWLTV 89
>d2c9aa1 b.1.1.4 (A:184-279) Receptor-type tyrosine-protein
phosphatase mu {Human (Homo sapiens) [TaxId: 9606]}
Length = 96
Score = 63.9 bits (154), Expect = 3e-15
Identities = 22/96 (22%), Positives = 30/96 (31%), Gaps = 3/96 (3%)
Query: 10 PPEITLRPRNQAVKAGGITSFYCIARGDPIPVIQWRKNGKRVSGTQ-SRYMVQEFPPGGS 68
P R +N V AG +F C A G + + G V V +
Sbjct: 2 TPHFL-RIQNVEVNAGQFATFQCSAIGRTVAGDRLWLQGIDVRDAPLKEIKVTSSRRFIA 60
Query: 69 LLRIEPVRHARDDAVYECVAENGVGDAVSAEASLTV 104
+ RD Y C+ G +S A L V
Sbjct: 61 SFNVVNTT-KRDAGKYRCMIRTEGGVGISNYAELVV 95
>d1g1ca_ b.1.1.4 (A:) Titin {Human (Homo sapiens), different modules
[TaxId: 9606]}
Length = 98
Score = 62.6 bits (151), Expect = 9e-15
Identities = 25/97 (25%), Positives = 38/97 (39%), Gaps = 3/97 (3%)
Query: 8 LDPPEITLRPRNQAVKAGGITSFYCIARGDPIPVIQWRKNGKRVSGTQSRYMVQEFPPGG 67
++ P+I R ++Q V G F G P P +W KNG ++ + Y
Sbjct: 2 MEAPKIFERIQSQTVGQGSDAHFRVRVVGKPDPECEWYKNGVKIERSDRIYWYWPEDNVC 61
Query: 68 SLLRIEPVRHARDDAVYECVAENGVGDAVSAEASLTV 104
L+ + D A A N G+ S+ A L V
Sbjct: 62 ELVIRDVTGE--DSASIMVKAINIAGET-SSHAFLLV 95
>d2fdbp2 b.1.1.4 (P:2252-2360) Fibroblast growth factor receptor,
FGFR {Human (Homo sapiens), FGFR1 [TaxId: 9606]}
Length = 109
Score = 60.8 bits (146), Expect = 4e-14
Identities = 27/107 (25%), Positives = 36/107 (33%), Gaps = 14/107 (13%)
Query: 10 PPEITLR-PRNQAVKAGGITSFYCIARGDPIPVIQWRKNGKRVSGT-----------QSR 57
P + P N + GG F C D P IQW K+ ++
Sbjct: 4 RPILQAGLPANASTVVGGDVEFVCKVYSDAQPHIQWIKHVEKNGSKYGPDGLPYLKVLKA 63
Query: 58 YMVQEFPPGGSLLRIEPVRHARDDAVYECVAENGVGDAVSAEASLTV 104
V +L I V D Y C+A N +G + A LTV
Sbjct: 64 AGVNTTDKEIEVLYIRNVTF-EDAGEYTCLAGNSIGIS-FHSAWLTV 108
>d1cs6a1 b.1.1.4 (A:7-103) Axonin-1 {Chicken (Gallus gallus) [TaxId:
9031]}
Length = 97
Score = 59.9 bits (144), Expect = 7e-14
Identities = 27/96 (28%), Positives = 37/96 (38%), Gaps = 7/96 (7%)
Query: 10 PPEITLRPRNQAVKAGGIT---SFYCIARGDPIPVIQWRKNGKRVSGTQSRYMVQEFPPG 66
P +P + G + C AR +P +W+ NG +
Sbjct: 4 GPVFEEQPAHTLFPEGSAEEKVTLTCRARANPPATYRWKMNGTELKMGPDSRYRLVAG-- 61
Query: 67 GSLLRIEPVRHARDDAVYECVAENGVGDAVSAEASL 102
L+ PV A+D Y+CVA N G VS EASL
Sbjct: 62 -DLVISNPV-KAKDAGSYQCVATNARGTVVSREASL 95
>d1biha4 b.1.1.4 (A:307-395) Hemolin {Moth (Hyalophora cecropia)
[TaxId: 7123]}
Length = 89
Score = 59.4 bits (143), Expect = 9e-14
Identities = 26/96 (27%), Positives = 36/96 (37%), Gaps = 10/96 (10%)
Query: 10 PPEITLRPRNQ-AVKAGGITSFYCIARGDPIPVIQWRKNGKRVSGTQSRYMVQEFPPGGS 68
P+ +P VK G + C G P P + W N K + + R V +
Sbjct: 2 APKYEQKPEKVIVVKQGQDVTIPCKVTGLPAPNVVWSHNAKPL--SGGRATVTDSG---- 55
Query: 69 LLRIEPVRHARDDAVYECVAENGVGDAVSAEASLTV 104
L I+ V+ D Y C A N GD E + V
Sbjct: 56 -LVIKGVK-NGDKGYYGCRATNEHGDK-YFETLVQV 88
>d1tnna_ b.1.1.4 (A:) Titin {Human (Homo sapiens), different modules
[TaxId: 9606]}
Length = 91
Score = 58.7 bits (141), Expect = 2e-13
Identities = 24/94 (25%), Positives = 38/94 (40%), Gaps = 4/94 (4%)
Query: 13 ITLRPRNQAVKAGGITSFYCIARGDPIPVIQWRKNGKRVSGTQSRYMVQEFPPGGSLLRI 72
I +PR+ V G F C G+P+P + W + G+ +S + +
Sbjct: 2 ILTKPRSMTVYEGESARFSCDTDGEPVPTVTWLRKGQVLSTSARHQVTTTKYKST---FE 58
Query: 73 EPVRHARDDAVYECVAENGVGDAVSAEASLTVYE 106
A D+ Y V EN G AE +LT+ +
Sbjct: 59 ISSVQASDEGNYSVVVENSEGKQ-EAEFTLTIQK 91
>d3b5ha1 b.1.1.4 (A:103-203) Cervical EMMPRIN {Human (Homo sapiens)
[TaxId: 9606]}
Length = 101
Score = 57.8 bits (138), Expect = 6e-13
Identities = 21/101 (20%), Positives = 36/101 (35%), Gaps = 8/101 (7%)
Query: 10 PPEITLRPRNQAVKAGGITSFYCIARGDPIPVI------QWRKNGKRVSGTQSRYMVQEF 63
PP + ++ + G C + P ++ ++G++SR+ V
Sbjct: 2 PPRVKAVKSSEHINEGETAMLVCKSESVPPVTDWAWYKITDSEDKALMNGSESRFFVSSS 61
Query: 64 PPGGSLLRIEPVRHARDDAVYECVAENGVGDAVSAEASLTV 104
G S L IE + D Y C + G A +L V
Sbjct: 62 -QGRSELHIENLNMEADPGQYRCNGTSSKGSD-QAIITLRV 100
>d1fhga_ b.1.1.4 (A:) Telokin {Turkey (Meleagris gallopavo) [TaxId:
9103]}
Length = 102
Score = 57.2 bits (137), Expect = 1e-12
Identities = 28/95 (29%), Positives = 36/95 (37%), Gaps = 3/95 (3%)
Query: 10 PPEITLRPRNQAVKAGGITSFYCIARGDPIPVIQWRKNGKRVSGTQSRYMVQEFPPGGSL 69
P T + V G F C G P P + W K+ V + + G
Sbjct: 8 KPYFTKTILDMEVVEGSAARFDCKVEGYPDPEVMWFKDDNPVK-ESRHFQIDYDEEGNCS 66
Query: 70 LRIEPVRHARDDAVYECVAENGVGDAVSAEASLTV 104
L I V DDA Y C A N +G+A + A L V
Sbjct: 67 LTISEVC-GDDDAKYTCKAVNSLGEA-TCTAELLV 99
>d1koaa1 b.1.1.4 (A:6265-6361) Twitchin {Nematode (Caenorhabditis
elegans) [TaxId: 6239]}
Length = 97
Score = 56.8 bits (136), Expect = 1e-12
Identities = 24/99 (24%), Positives = 36/99 (36%), Gaps = 4/99 (4%)
Query: 11 PEITLRPRNQAVKAGGITSFYCIARGDPIPVIQWRKNGKRVSGTQSRYMVQEFPPGGSLL 70
P ++P V G +FYC PV+ W K+ + + QS ++ + L
Sbjct: 2 PRFIVKPYGTEVGEGQSANFYCRVIASSPPVVTWHKDDREL--KQSVKYMKRYNGNDYGL 59
Query: 71 RIEPVRHARDDAVYECVAENGVGDAVSAEASLTVYEGEE 109
I V+ D Y A+N G L V E
Sbjct: 60 TINRVKG-DDKGEYTVRAKNSYGTK-EEIVFLNVTRHSE 96
>d1f97a2 b.1.1.4 (A:129-238) Junction adhesion molecule, JAM,
C-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}
Length = 110
Score = 55.8 bits (133), Expect = 4e-12
Identities = 26/105 (24%), Positives = 35/105 (33%), Gaps = 9/105 (8%)
Query: 10 PPEITLRPRNQAVKAGGITSFYCIA-RGDPIPVIQWRKNGKRVSGTQSRYMVQE------ 62
PP +V G C G P W K+G + ++
Sbjct: 2 PPSKPTISVPSSVTIGNRAVLTCSEHDGSPPSEYSWFKDGISMLTADAKKTRAFMNSSFT 61
Query: 63 FPPGGSLLRIEPVRHARDDAVYECVAENGVGDAV-SAEASLTVYE 106
P L +PV A D Y C A+NG G A+ S A + E
Sbjct: 62 IDPKSGDLIFDPV-TAFDSGEYYCQAQNGYGTAMRSEAAHMDAVE 105
>d1cs6a3 b.1.1.4 (A:209-299) Axonin-1 {Chicken (Gallus gallus)
[TaxId: 9031]}
Length = 91
Score = 55.2 bits (132), Expect = 5e-12
Identities = 25/97 (25%), Positives = 41/97 (42%), Gaps = 11/97 (11%)
Query: 10 PPEITLR-PRNQAVKAGGITSFYCIARGDPIPVIQWRKNGKRVSGTQSRYMVQEFPPGGS 68
P I + P + G + + C A G+P+P I+WRK ++
Sbjct: 4 APSIKAKFPADTYALTGQMVTLECFAFGNPVPQIKWRKL--------DGSQTSKWLSSEP 55
Query: 69 LLRIEPVRHARDDAVYECVAENGVGDAVSAEASLTVY 105
LL I+ V D+ YEC AEN G + + + ++
Sbjct: 56 LLHIQNV-DFEDEGTYECEAENIKGRD-TYQGRIIIH 90
>d2aw2a1 b.1.1.1 (A:34-137) B- and T-lymphocyte attenuator CD272
{Human (Homo sapiens) [TaxId: 9606]}
Length = 104
Score = 55.4 bits (132), Expect = 6e-12
Identities = 19/102 (18%), Positives = 27/102 (26%), Gaps = 5/102 (4%)
Query: 9 DPPEITLRPRNQAVKAGGITSFYCIARGDP-IPVIQWRKNGKRVSGTQSRYMVQEFPPGG 67
D R ++ AG C + P + W K
Sbjct: 2 DVQLYIKRQSEHSILAGDPFELECPVKYCANRPHVTWCKLNGTTCVKLEDRQTSWKEEKN 61
Query: 68 ---SLLRIEPVRHARDDAVYECVAENGVGDAVSAEASLTVYE 106
+L EPV D+ Y C A S +L V +
Sbjct: 62 ISFFILHFEPVL-PNDNGSYRCSANFQSNLIESHSTTLYVTD 102
>d1biha1 b.1.1.4 (A:5-98) Hemolin {Moth (Hyalophora cecropia)
[TaxId: 7123]}
Length = 94
Score = 54.7 bits (130), Expect = 9e-12
Identities = 20/95 (21%), Positives = 29/95 (30%), Gaps = 3/95 (3%)
Query: 10 PPEITLRPRNQAVKAGGITSFYCIARGDPIPVIQWRKNGKRVSGTQSRYMVQEFPPGGSL 69
P + +P + T CI G+ V K + Q G
Sbjct: 2 YPVLKDQPAEVLFRENNPTVLECIIEGNDQGVKYSWKKDGKSYNWQEHNAALRKDEGS-- 59
Query: 70 LRIEPVRHARDDAVYECVAENGVGDAVSAEASLTV 104
L + + D+ Y+C AE G A S S
Sbjct: 60 LVFLRPQAS-DEGHYQCFAETPAGVASSRVISFRK 93
>d1cs6a4 b.1.1.4 (A:300-388) Axonin-1 {Chicken (Gallus gallus)
[TaxId: 9031]}
Length = 89
Score = 53.7 bits (128), Expect = 2e-11
Identities = 24/94 (25%), Positives = 39/94 (41%), Gaps = 8/94 (8%)
Query: 11 PEITLRPRNQAVKAGGITSFYCIARGDPIPVIQWRKNGKRVSGTQSRYMVQEFPPGGSLL 70
P+ + G + C+A G P P ++W ++G+ ++ + L
Sbjct: 2 PDWLDVITDTEADIGSDLRWSCVASGKPRPAVRWLRDGQPLASQNRIEVSGGE------L 55
Query: 71 RIEPVRHARDDAVYECVAENGVGDAVSAEASLTV 104
R + D +Y+CVAEN G A A LTV
Sbjct: 56 RFSKLV-LEDSGMYQCVAENKHGTV-YASAELTV 87
>d1gxea_ b.1.1.4 (A:) Cardiac myosin binding protein C, different
domains {Human (Homo sapiens) [TaxId: 9606]}
Length = 130
Score = 54.7 bits (130), Expect = 2e-11
Identities = 25/130 (19%), Positives = 40/130 (30%), Gaps = 34/130 (26%)
Query: 9 DPPEITL-----RPRNQAVKAGGITSFYCIARGDPIPVIQWRKNGKRVSGTQSRYMVQ-- 61
+PP+I L P V AG GDP P + W+K + + +R
Sbjct: 3 EPPKIHLDCPGRIPDTIVVVAGNKLRLDVPISGDPAPTVIWQKAITQGNKAPARPAPDAP 62
Query: 62 -------------------------EFPPGGSLLRIEPVRHARDDAVYECVAENGVGDAV 96
E S+ +E D+ VY +N VG+
Sbjct: 63 EDTGDSDEWVFDKKLLCETEGRVRVETTKDRSIFTVEGAEK-EDEGVYTVTVKNPVGED- 120
Query: 97 SAEASLTVYE 106
++ V +
Sbjct: 121 QVNLTVKVID 130
>d1rhfa2 b.1.1.4 (A:98-182) Tyrosine-protein kinase receptor tyro3,
second domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 85
Score = 53.1 bits (126), Expect = 3e-11
Identities = 16/95 (16%), Positives = 27/95 (28%), Gaps = 13/95 (13%)
Query: 11 PEITLRPRNQAVKAGGITSF-YCIARGDPIPVIQWRKNGKRVSGTQSRYMVQEFPPGGSL 69
P T+ P++ AV I W + ++ G V
Sbjct: 2 PFFTVEPKDLAVPPNAPFQLSCEAVGPPEPVTIVWWRGTTKIGGPAPSPSVLNVT----- 56
Query: 70 LRIEPVRHARDDAVYECVAENGVGDAVSAEASLTV 104
++ C A N G A S A++ +
Sbjct: 57 -------GVTQSTMFSCEAHNLKGLASSRTATVHL 84
>d2crya1 b.1.1.1 (A:8-122) Kin of IRRE-like protein 3, KIRREL3
{Human (Homo sapiens) [TaxId: 9606]}
Length = 115
Score = 53.9 bits (128), Expect = 3e-11
Identities = 21/107 (19%), Positives = 29/107 (27%), Gaps = 7/107 (6%)
Query: 10 PPEITLRPRNQAVKAGGITSFYCIARGDPIPVIQWRKNGKRVSGTQSRYMVQEFPP---- 65
PP I+ + Q G C R P P + V + +
Sbjct: 7 PPIIS-STQTQHALHGEKGQIKCFIRSTPPPDRIAWSWKENVLESGTSGRYTVETISTEE 65
Query: 66 -GGSLLRIEPVRHARDDAVYECVAENGVGDAVSAEASLTVYEGEEKP 111
S L I + A +Y C A N G + L E
Sbjct: 66 GVISTLTISNIVRADFQTIYNCTAWNSFGSD-TEIIRLKEQGSEMSG 111
>d2avga1 b.1.1.4 (A:1-110) Cardiac myosin binding protein C,
different domains {Human (Homo sapiens) [TaxId: 9606]}
Length = 110
Score = 53.5 bits (127), Expect = 3e-11
Identities = 21/107 (19%), Positives = 35/107 (32%), Gaps = 12/107 (11%)
Query: 10 PPEITLRPRNQAVKAGGITSFYCIARGDPI---PVIQWRKNGKRVSGTQSRYMVQEFP-- 64
+RP++ V GG +F G + PV++W K ++ +Q
Sbjct: 4 IGLFVMRPQDGEVTVGGSITFSARVAGASLLKPPVVKWFKGKWVDLSSKVGQHLQLHDSY 63
Query: 65 -----PGGSLLRIEPVRHARDDAVYECVAENGVGDAVSAEASLTVYE 106
L I + A Y C + +LTV+E
Sbjct: 64 DRASKVYLFELHITDAQPA-FTGGYRCEVSTKDKFD-CSNFNLTVHE 108
>d1zxqa1 b.1.1.3 (A:87-192) Intercellular cell adhesion molecule-2
(ICAM-2) {Human (Homo sapiens) [TaxId: 9606]}
Length = 106
Score = 53.5 bits (127), Expect = 4e-11
Identities = 11/106 (10%), Positives = 24/106 (22%), Gaps = 11/106 (10%)
Query: 10 PPEITLRPRNQAVKAGGITSFYCIARG---DPIPVIQWRKNGKRVSGTQSRYMVQEFPPG 66
P ++ L + V G + C + + + +
Sbjct: 2 PRQVILTLQPTLVAVGKSFTIECRVPTVEPLDSLTLFLFRGNETLHYETFGKAAPAPQEA 61
Query: 67 GSLLRIEPVRHARDDAVYECVAENGVGDA-------VSAEASLTVY 105
+ + C+A + SA L +Y
Sbjct: 62 TATFNSTAD-REDGHRNFSCLAVLDLMSRGGNIFHKHSAPKMLEIY 106
>d1nbqa2 b.1.1.4 (A:130-233) Junction adhesion molecule, JAM,
C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 104
Score = 53.1 bits (126), Expect = 5e-11
Identities = 21/104 (20%), Positives = 28/104 (26%), Gaps = 8/104 (7%)
Query: 10 PPEITLRPRNQAVKAGGITSFYCIA-RGDPIPVIQWRKNGKRVSGTQSRYMVQE-----F 63
PP + G C G P W K+G +
Sbjct: 2 PPSKPTVNIPSSATIGNRAVLTCSEQDGSPPSEYTWFKDGIVMPTNPKSTRAFSNSSYVL 61
Query: 64 PPGGSLLRIEPVRHARDDAVYECVAENGVGDAV-SAEASLTVYE 106
P L +P+ D Y C A NG G + S + E
Sbjct: 62 NPTTGELVFDPLSA-SDTGEYSCEARNGYGTPMTSNAVRMEAVE 104
>d1gl4b_ b.1.1.4 (B:) Perlecan Ig3 domain {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 89
Score = 52.3 bits (124), Expect = 6e-11
Identities = 20/97 (20%), Positives = 36/97 (37%), Gaps = 11/97 (11%)
Query: 10 PPEITLR-PRNQAVKAGGITSFYCIAR-GDPIPVIQWRKNGKRVSGTQSRYMVQEFPPGG 67
P +T+ R+Q+V+ G +F C A+ P + W + +++
Sbjct: 1 PIMVTVEEQRSQSVRPGADVTFICTAKSKSPAYTLVWTRLHNGKLPSRAMDFN------- 53
Query: 68 SLLRIEPVRHARDDAVYECVAENGVGDAVSAEASLTV 104
+L I V+ + Y C N A+L V
Sbjct: 54 GILTIRNVQPSDAG-TYVCTGSNMFAMD-QGTATLHV 88
>d1wiua_ b.1.1.4 (A:) Twitchin {Nematode (Caenorhabditis elegans)
[TaxId: 6239]}
Length = 93
Score = 51.9 bits (123), Expect = 8e-11
Identities = 16/95 (16%), Positives = 29/95 (30%), Gaps = 4/95 (4%)
Query: 10 PPEITLRPRNQAVKAGGITSFYCIARGDPIPVIQWRKNGKRVSGTQSRYMVQEFPPGGSL 69
P+I R +KAG + G P P W + + +
Sbjct: 2 KPKILTASRKIKIKAGFTHNLEVDFIGAPDPTATWTVGDSGAALAPELLVDAKSSTTS-- 59
Query: 70 LRIEPVRHARDDAVYECVAENGVGDAVSAEASLTV 104
+ + A Y+ +N +G+ A + V
Sbjct: 60 IFFPSAKRADSG-NYKLKVKNELGED-EAIFEVIV 92
>d2ifga1 b.1.1.4 (A:192-283) High affinity nerve growth factor
receptor TrkA, different domains {Human (Homo sapiens)
[TaxId: 9606]}
Length = 92
Score = 52.1 bits (123), Expect = 9e-11
Identities = 18/95 (18%), Positives = 27/95 (28%), Gaps = 5/95 (5%)
Query: 10 PPEITLRPRNQAVKAGGITSFYCIARGDPIPVIQWRKNGKRVSGTQSRYMVQEFPPGGSL 69
P + ++ N +V G C G + W S T +
Sbjct: 2 VPTLKVQVPNASVDVGDDVLLRCQVEGRGLEQAGWILTELEQSATVMKSGGLPSLGL--- 58
Query: 70 LRIEPVRHARDDAVYECVAENGVGDAVSAEASLTV 104
+ V + C AEN VG A + V
Sbjct: 59 -TLANVTSDLNRKNVTCWAENDVGRA-EVSVQVNV 91
>d1x44a1 b.1.1.4 (A:8-97) Myosin-binding protein C, slow-type {Human
(Homo sapiens) [TaxId: 9606]}
Length = 90
Score = 51.3 bits (122), Expect = 1e-10
Identities = 18/98 (18%), Positives = 30/98 (30%), Gaps = 10/98 (10%)
Query: 13 ITLRPRNQAVKAGGITSFYCIARGDPIPVIQWRKNGKRVSGTQSRYMVQEFPPGGSLLRI 72
+T + + G C + ++W KNG+ + +L I
Sbjct: 3 VTKQLEDTTAYCGERVELECEV-SEDDANVKWFKNGEEIIPGPKSRYRIRVEGKKHILII 61
Query: 73 EPVRHARDDAVYECVAENGVGDAVSAEASLTVYEGEEK 110
E D A Y + G A L+V + K
Sbjct: 62 EGATK-ADAAEYSVMTTGGQS-----SAKLSV---DLK 90
>d2oz4a3 b.1.1.4 (A:367-450) Intercellular adhesion molecule-1,
ICAM-1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 84
Score = 50.8 bits (120), Expect = 2e-10
Identities = 18/99 (18%), Positives = 30/99 (30%), Gaps = 19/99 (19%)
Query: 10 PPEITLR--PRNQAVKAGGITSFYCIARGDPIPVIQWRKNGKRVSGTQSRYMVQEFPPGG 67
P + R P N + C A G+P+P ++ K+G
Sbjct: 2 GPRLDERDCPGNWTWPENSQQTPMCQAWGNPLPELKCLKDGTFPLPIGESVT-------- 53
Query: 68 SLLRIEPVRHARDDAVYECVAENGVGDAVSAEASLTVYE 106
+ Y C A + G V+ E ++ V
Sbjct: 54 --------VTRDLEGTYLCRARSTQG-EVTREVTVNVLS 83
>d1epfa1 b.1.1.4 (A:1-97) Neural cell adhesion molecule (NCAM) {Rat
(Rattus norvegicus) [TaxId: 10116]}
Length = 97
Score = 50.5 bits (119), Expect = 4e-10
Identities = 16/97 (16%), Positives = 27/97 (27%), Gaps = 3/97 (3%)
Query: 12 EITLRPRNQAVKAGGITSFYCIA-RGDPIPVIQWRKNGKRVSGTQ-SRYMVQEFPPGGSL 69
++ + P + G F C I W R V S
Sbjct: 2 QVDIVPSQGEISVGESKFFLCQVAGDAKDKDISWFSPNGEKLSPNQQRISVVWNDDDSST 61
Query: 70 LRIEPVRHARDDAVYECVAENGVGDAVSAEASLTVYE 106
L I +Y+CV G A ++ +++
Sbjct: 62 LTIYNANIDDAG-IYKCVVTAEDGTQSEATVNVKIFQ 97
>d1epfa2 b.1.1.4 (A:98-189) Neural cell adhesion molecule (NCAM)
{Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 92
Score = 49.5 bits (117), Expect = 7e-10
Identities = 15/94 (15%), Positives = 23/94 (24%), Gaps = 5/94 (5%)
Query: 11 PEITLRPRNQAVKAGGITSFYCIARGDPIPVIQWRKNGKRVSGTQSRYMVQEFPPGGSLL 70
P Q K G C P I W+ G+ V + + +
Sbjct: 2 LMFKNAPTPQEFKEGEDAVIVCDVVSSLPPTIIWKHKGRDVILKKDVRFIVLSNNYLQIR 61
Query: 71 RIEPVRHARDDAVYECVAENGVGDAVSAEASLTV 104
I+ D+ Y C + V
Sbjct: 62 GIKK----TDEGTYRCEGRILAR-GEINFKDIQV 90
>d1iama1 b.1.1.3 (A:83-185) Intercellular cell adhesion molecule-1
(ICAM-1) {Human (Homo sapiens) [TaxId: 9606]}
Length = 103
Score = 48.7 bits (115), Expect = 2e-09
Identities = 15/106 (14%), Positives = 25/106 (23%), Gaps = 16/106 (15%)
Query: 10 PPEITLRPRNQAVKAGGITSFYCIARG---DPIPVIQWRKNGKRVSGTQSRYMVQEFPPG 66
P + L P G + C G + + K + + E
Sbjct: 4 PERVELAPLPSWQPVGKQLTLRCQVEGGAPRAQLTVVLLRGEKELKREPAVGEPAE---- 59
Query: 67 GSLLRIEPVRHARDDAVYECVAENGVGDA-------VSAEASLTVY 105
+ R A + C E + SA L +
Sbjct: 60 -VTTTVLVRRD-HHGAQFSCRTELDLRPQGLELFENTSAPYQLQTF 103
>d1he7a_ b.1.1.4 (A:) High affinity nerve growth factor receptor
TrkA, different domains {Human (Homo sapiens) [TaxId:
9606]}
Length = 107
Score = 46.5 bits (109), Expect = 2e-08
Identities = 21/98 (21%), Positives = 34/98 (34%), Gaps = 10/98 (10%)
Query: 17 PRNQAVKAGGITSFYCI---ARGDPIPVIQWRKNGKRVSGTQSRYMVQEFPP-----GGS 68
P + + +CI G P P ++W NG ++ T + P
Sbjct: 4 PASVQLHTAVEMHHWCIPFSVDGQPAPSLRWLFNGSVLNETSFIFTEFLEPAANETVRHG 63
Query: 69 LLRIEPVRHARDDAVYECVAENGVGDAVSAEASLTVYE 106
LR+ H ++ Y +A N G A SA +
Sbjct: 64 CLRLNQPTH-VNNGNYTLLAANPFGQA-SASIMAAFMD 99
>d1iray3 b.1.1.4 (Y:205-311) Type-1 interleukin-1 receptor {Human
(Homo sapiens) [TaxId: 9606]}
Length = 107
Score = 45.9 bits (107), Expect = 3e-08
Identities = 16/105 (15%), Positives = 27/105 (25%), Gaps = 11/105 (10%)
Query: 10 PPEITLRPRNQAVKAGGITSFYCIARGDPIPVIQWRKNGKRVSGTQSRYMVQ-------- 61
P ++ V G C G + W+ NG +
Sbjct: 2 PVIVSPANETMEVDLGSQIQLICNVTGQLSDIAYWKWNGSVIDEDDPVLGEDYYSVENPA 61
Query: 62 --EFPPGGSLLRIEPVRHARDDAVYECVAENGVGDAVSAEASLTV 104
++L I + + C A+N G +A L
Sbjct: 62 NKRRSTLITVLNISEIESRFYKHPFTCFAKNTHGID-AAYIQLIY 105
>d2dava1 b.1.1.4 (A:8-120) Myosin-binding protein C, slow-type
{Human (Homo sapiens) [TaxId: 9606]}
Length = 113
Score = 44.6 bits (104), Expect = 8e-08
Identities = 17/108 (15%), Positives = 32/108 (29%), Gaps = 12/108 (11%)
Query: 14 TLRPRNQAVKAGGITSFYCIARGDPI---PVIQWRKNGKRVSGTQSRYMVQ-------EF 63
+P+ VK G +F + + + P I+W K +++ +Q
Sbjct: 4 IEKPQGGTVKVGEDITFIAKVKAEDLLRKPTIKWFKGKWMDLASKAGKHLQLKETFERHS 63
Query: 64 PPGGSLLRIEPVRHARDDAVYECVAENGVGDAVSAEASLTVYEGEEKP 111
++I + Y C S L V+E
Sbjct: 64 RVYTFEMQIIKAKDN-FAGNYRCEVTYKDKFD-SCSFDLEVHESTGTT 109
>d1f2qa2 b.1.1.4 (A:86-174) IgE high affinity receptor alpha subunit
{Human (Homo sapiens) [TaxId: 9606]}
Length = 89
Score = 43.5 bits (101), Expect = 2e-07
Identities = 14/96 (14%), Positives = 30/96 (31%), Gaps = 12/96 (12%)
Query: 13 ITLRPRNQAVKAGGITSFYCIARGD-PIPVIQWRKNGKRVSGTQSRYMVQEFPPGGSLLR 71
+ L+ + V G C + + + + K+G+ + + +
Sbjct: 3 LLLQASAEVVMEGQPLFLRCHGWRNWDVYKVIYYKDGEALKYWYENHN----------IS 52
Query: 72 IEPVRHARDDAVYECVAENGVGDAVSAEASLTVYEG 107
I D Y C + D S ++TV +
Sbjct: 53 ITNATV-EDSGTYYCTGKVWQLDYESEPLNITVIKA 87
>d1wwbx_ b.1.1.4 (X:) Ligand binding domain of trkB receptor {Human
(Homo sapiens) [TaxId: 9606]}
Length = 103
Score = 43.4 bits (101), Expect = 2e-07
Identities = 18/96 (18%), Positives = 38/96 (39%), Gaps = 8/96 (8%)
Query: 17 PRNQAVKAGGITSFYCI---ARGDPIPVIQWRKNGKRVSGT---QSRYMVQEFPPGGSLL 70
P +++ +CI +G+P P +QW NG ++ + ++ V L
Sbjct: 5 PTITFLESPTSDHHWCIPFTVKGNPKPALQWFYNGAILNESKYICTKIHVTNHTEYHGCL 64
Query: 71 RIEPVRHARDDAVYECVAENGVGDAVSAEASLTVYE 106
+++ H ++ Y +A+N G + S
Sbjct: 65 QLDNPTHM-NNGDYTLIAKNEYGKD-EKQISAHFMG 98
>d1l6za2 b.1.1.4 (A:108-203) Biliary glycoprotein C (CD66a,
CEACAM1A[1,4]), C-terminal domain {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 96
Score = 43.1 bits (100), Expect = 2e-07
Identities = 16/94 (17%), Positives = 29/94 (30%), Gaps = 6/94 (6%)
Query: 14 TLRPRNQAVKAGGITSFYCIARGDPIPVIQWRKNGKRVSGTQSRYMVQEFPPGGSLLRIE 73
L+ N VK + C++ + + + S+LRI+
Sbjct: 7 FLQVTNTTVKELDSVTLTCLSNDIGANIQWLFNSQSLQLTERMTLS-----QNNSILRID 61
Query: 74 PVRHARDDAVYECVAENGVGDAVSAEASLTVYEG 107
P++ Y+C N V S L +
Sbjct: 62 PIKREDAG-EYQCEISNPVSVRRSNSIKLDIIFD 94
>d1iray2 b.1.1.4 (Y:102-204) Type-1 interleukin-1 receptor {Human
(Homo sapiens) [TaxId: 9606]}
Length = 103
Score = 42.5 bits (99), Expect = 5e-07
Identities = 17/101 (16%), Positives = 28/101 (27%), Gaps = 16/101 (15%)
Query: 20 QAVKAGGITSFYC------IARGDPIPVIQWRKNGKRVSGTQSRYMVQEFPPGGSLLRIE 73
Q + G C + +P +QW K+ K + + L +
Sbjct: 9 QKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPLLLDNIHFSGV-----KDRLIVM 63
Query: 74 PVRHARDDAVYECVAENGVGDA---VSAEASLTVYEGEEKP 111
V + Y C A ++ E E KP
Sbjct: 64 NVAE-KHRGNYTCHASYTYLGKQYPITRVIEFITLE-ENKP 102
>d1fnla2 b.1.1.4 (A:87-175) Fc gamma receptor ectodomain (CD32)
{Human (Homo sapiens), III [TaxId: 9606]}
Length = 89
Score = 40.7 bits (94), Expect = 2e-06
Identities = 13/95 (13%), Positives = 27/95 (28%), Gaps = 12/95 (12%)
Query: 13 ITLRPRNQAVKAGGITSFYCIARGD-PIPVIQWRKNGKRVSGTQSRYMVQEFPPGGSLLR 71
+ L+ K C + + + + + +NGK
Sbjct: 5 LLLQAPRWVFKEEDPIHLRCHSWKNTALHKVTYLQNGKDRKYFHHNSDF----------H 54
Query: 72 IEPVRHARDDAVYECVAENGVGDAVSAEASLTVYE 106
I +D Y C G + S ++T+ +
Sbjct: 55 IPKATL-KDSGSYFCRGLVGSKNVSSETVNITITQ 88
>d1pd6a_ b.1.1.4 (A:) Cardiac myosin binding protein C, different
domains {Human (Homo sapiens) [TaxId: 9606]}
Length = 94
Score = 40.2 bits (93), Expect = 3e-06
Identities = 19/98 (19%), Positives = 31/98 (31%), Gaps = 9/98 (9%)
Query: 10 PPEITLRPR-NQAVKAGGITSFYCIARGDPIPVIQWRKNGKRVSGTQSRYMVQEFPPGGS 68
+ V G D ++W KNG+ + + S+Y+ + +
Sbjct: 5 STAFQKKLEPAYQVSKGHKIRLTVEL-ADHDAEVKWLKNGQEIQMSGSKYIFESIGAKRT 63
Query: 69 LLRIEPVRHARDDAVYECVAENGVGDAVSAEASLTVYE 106
L + DDA Y+CV L V E
Sbjct: 64 LTISQC--SLADDAAYQCVVGG-----EKCSTELFVKE 94
>d2fcba2 b.1.1.4 (A:91-178) Fc gamma receptor ectodomain (CD32)
{Human (Homo sapiens), IIb [TaxId: 9606]}
Length = 88
Score = 39.9 bits (92), Expect = 3e-06
Identities = 15/95 (15%), Positives = 29/95 (30%), Gaps = 12/95 (12%)
Query: 13 ITLRPRNQAVKAGGITSFYCIARGD-PIPVIQWRKNGKRVSGTQSRYMVQEFPPGGSLLR 71
+ L+ + + G C + D P+ + + +N ++F
Sbjct: 3 LVLQTPHLEFQEGETIVLRCHSWKDKPLVKVTFFQN----------GKSKKFSRSDPNFS 52
Query: 72 IEPVRHARDDAVYECVAENGVGDAVSAEASLTVYE 106
I H+ Y C G S ++TV
Sbjct: 53 IPQANHS-HSGDYHCTGNIGYTLYSSKPVTITVQA 86
>d1f97a1 b.1.1.1 (A:27-128) Junction adhesion molecule, JAM,
N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}
Length = 102
Score = 40.1 bits (92), Expect = 4e-06
Identities = 12/100 (12%), Positives = 24/100 (24%), Gaps = 8/100 (8%)
Query: 11 PEITLRPRNQAVKAGGITSFYCIARGDPIPVIQWRKNGKRV------SGTQSRYMVQEFP 64
+ + V C G P ++W+ + +
Sbjct: 2 GSVYTAQSDVQVPENESIKLTCTYSGFSSPRVEWKFVQGSTTALVCYNSQITAPYADRVT 61
Query: 65 PGGSLLRIEPVRHARDDAVYECVAENGVGDAVSAEASLTV 104
S + V + Y C+ G E S+ +
Sbjct: 62 FSSSGITFSSVTRKDNG-EYTCMVSEEGGQN-YGEVSIHL 99
>d1n26a1 b.1.1.4 (A:1-93) Interleukin-6 receptor alpha chain,
N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 93
Score = 39.5 bits (91), Expect = 5e-06
Identities = 12/96 (12%), Positives = 19/96 (19%), Gaps = 11/96 (11%)
Query: 10 PPEITLRPRNQAVKAGGITSFYCIARGDPIPV-IQWRKNGKRVSGTQSRYMVQEFPPGGS 68
P + G + C + W + + G
Sbjct: 6 CPAQEVARGVLTSLPGDSVTLTCPGVEPEDNATVHWVLRKP-----AAGSHPSRWAGMGR 60
Query: 69 LLRIEPVRHARDDAVYECVAENGVGDAVSAEASLTV 104
L + V+ D Y C L V
Sbjct: 61 RLLLRSVQ-LHDSGNYSCYRAGRPA----GTVHLLV 91
>d1tiua_ b.1.1.4 (A:) Twitchin {Human (Homo sapiens), Ig repeat 27
[TaxId: 9606]}
Length = 89
Score = 37.5 bits (86), Expect = 3e-05
Identities = 15/95 (15%), Positives = 31/95 (32%), Gaps = 9/95 (9%)
Query: 12 EITLRPRNQAVKAGGITSFYCIARGDPIPVIQWRKNGKRVSGTQSRYMVQEFPPGGSLLR 71
E+ V G F +P QW+ G+ ++ + ++++ +L
Sbjct: 3 EVEKPLYGVEVFVGETAHFEIEL-SEPDVHGQWKLKGQPLTASPDCEIIEDGKK--HILI 59
Query: 72 IEPVRHARDDAVYECVAENGVGDAVSAEASLTVYE 106
+ + A N + A+L V E
Sbjct: 60 LHNCQLGMTG-EVSFQAAN-----AKSAANLKVKE 88
>d1olza1 b.1.1.4 (A:537-628) Semaphorin 4d Ig-like domain {Human
(Homo sapiens) [TaxId: 9606]}
Length = 92
Score = 37.3 bits (85), Expect = 4e-05
Identities = 16/89 (17%), Positives = 31/89 (34%), Gaps = 7/89 (7%)
Query: 17 PRNQAVKAGGITSFYCIARGDPIPVIQWRKNGKRVSGTQSRYMVQEFPPGGSLLRIEPVR 76
R K GG C + + V +NG + + ++ L I +
Sbjct: 4 YRQHFFKHGGTAELKCSQKSNLARVFWKFQNGVLKAESPKYGLMGRKN-----LLIFNLS 58
Query: 77 HARDDAVYECVAENGVGDAVSAEASLTVY 105
D VY+C++E V + + + +
Sbjct: 59 EG-DSGVYQCLSEERVKNK-TVFQVVAKH 85
>d1cs6a2 b.1.1.4 (A:104-208) Axonin-1 {Chicken (Gallus gallus)
[TaxId: 9031]}
Length = 105
Score = 37.3 bits (85), Expect = 5e-05
Identities = 17/103 (16%), Positives = 26/103 (25%), Gaps = 9/103 (8%)
Query: 7 FLDPPEITLRPRNQAVKAGGITSFYCIA-RGDPIPVIQWRKNGKRVSGTQSRYMVQEFPP 65
FL R + G F C P +W N
Sbjct: 2 FLQEFSAEERD-PVKITEGWGVMFTCSPPPHYPALSYRWLLNEFPNFIPADGRRFVS-QT 59
Query: 66 GGSLLRIEPVRHARDDAVYECVAENGVGDA----VSAEASLTV 104
G+L + D Y C A + + S + L++
Sbjct: 60 TGNLYIAKTEAS--DLGNYSCFATSHIDFITKSVFSKFSQLSL 100
>d1q0xl2 b.1.1.2 (L:108-212) Immunoglobulin light chain lambda
constant domain, CL-lambda {Human (Homo sapiens)
[TaxId: 9606]}
Length = 102
Score = 36.9 bits (85), Expect = 7e-05
Identities = 13/86 (15%), Positives = 24/86 (27%), Gaps = 7/86 (8%)
Query: 10 PPEITLRPRNQAVKAGGITSFYCIARG--DPIPVIQWRKNGKRVSGTQSRYMVQEFPPGG 67
P +TL P + + + C + + W+ +G V+ +
Sbjct: 5 SPTVTLFPPSSEELSTAKATLVCTITDFYPGVVTVDWKVDGTPVTAGMETTQPSKQSNNK 64
Query: 68 ----SLLRIEPVRHARDDAVYECVAE 89
S L + R Y C
Sbjct: 65 YMASSYLTLTARAWERHS-SYSCQVT 89
>d1nbqa1 b.1.1.1 (A:25-129) Junction adhesion molecule, JAM,
N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 105
Score = 36.7 bits (83), Expect = 9e-05
Identities = 9/103 (8%), Positives = 26/103 (25%), Gaps = 8/103 (7%)
Query: 8 LDPPEITLRPRNQAVKAGGITSFYCIARGDPIPVIQWRKNGK------RVSGTQSRYMVQ 61
+ + + C G P ++W+ + + +
Sbjct: 2 MGSVTVHSSEPEVRIPENNPVKLSCAYSGFSSPRVEWKFDQGDTTRLVCYNNKITASYED 61
Query: 62 EFPPGGSLLRIEPVRHARDDAVYECVAENGVGDAVSAEASLTV 104
+ + + V Y C+ G++ E + +
Sbjct: 62 RVTFLPTGITFKSVTREDTG-TYTCMVSEEGGNS-YGEVKVKL 102
>d1f2qa1 b.1.1.4 (A:4-85) IgE high affinity receptor alpha subunit
{Human (Homo sapiens) [TaxId: 9606]}
Length = 82
Score = 35.8 bits (81), Expect = 1e-04
Identities = 14/95 (14%), Positives = 24/95 (25%), Gaps = 15/95 (15%)
Query: 11 PEITLRPRNQAVKAGGITSFYCIARGDPIPVIQWRKNGKRVSGTQSRYMVQEFPPGGSLL 70
P+++L P + G + C + S L
Sbjct: 2 PKVSLNPPWNRIFKGENVTLTCNGNNFFEVSSTKW-----------FHNGSLSEETNSSL 50
Query: 71 RIEPVRHARDDAVYECVAENGVGDAVSAEASLTVY 105
I + D Y+C + S L V+
Sbjct: 51 NIVNAKFE-DSGEYKCQHQQVNE---SEPVYLEVF 81
>d2fcba1 b.1.1.4 (A:6-90) Fc gamma receptor ectodomain (CD32) {Human
(Homo sapiens), IIb [TaxId: 9606]}
Length = 85
Score = 35.0 bits (79), Expect = 3e-04
Identities = 16/96 (16%), Positives = 21/96 (21%), Gaps = 17/96 (17%)
Query: 11 PEITLRPRNQAVKAGGITSFYCIARG-DPIPVIQWRKNGKRVSGTQSRYMVQEFPPGGSL 69
+ L P+ V + C IQW NG +
Sbjct: 5 AVLKLEPQWINVLQEDSVTLTCRGTHSPESDSIQWFHNGNLIPTHTQPSYR--------- 55
Query: 70 LRIEPVRHARDDAVYECVAENGVGDAVSAEASLTVY 105
+ D Y C S LTV
Sbjct: 56 ----FKANNNDSGEYTCQTGQTSL---SDPVHLTVL 84
>d1fnla1 b.1.1.4 (A:3-86) Fc gamma receptor ectodomain (CD32) {Human
(Homo sapiens), III [TaxId: 9606]}
Length = 84
Score = 34.1 bits (77), Expect = 5e-04
Identities = 13/97 (13%), Positives = 22/97 (22%), Gaps = 15/97 (15%)
Query: 8 LDPPEITLRPRNQAVKAGGITSFYCIARGDPIPVIQWRKNGKRVSGTQSRYMVQEFPPGG 67
L + L P+ +V + C P + + + +Q+
Sbjct: 3 LPKAVVFLEPQWYSVLEKDSVTLKCQGAYSPEDNSTQWFHNESLISSQASSYFI------ 56
Query: 68 SLLRIEPVRHARDDAVYECVAENGVGDAVSAEASLTV 104
D Y C S L V
Sbjct: 57 ------DAATVNDSGEYRCQTNLSTL---SDPVQLEV 84
>d1ccza1 b.1.1.1 (A:1-93) CD2-binding domain of CD58, N-terminal
domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 93
Score = 34.1 bits (77), Expect = 6e-04
Identities = 14/91 (15%), Positives = 26/91 (28%), Gaps = 13/91 (14%)
Query: 22 VKAGGITSFYCIARGDPIPVIQWRKNGK--------RVSGTQSRYMVQEFPPGGSLLRIE 73
G +F+ + P+ + W+K S L I
Sbjct: 7 GVVYGNVTFHVPS-NVPLKEVLWKKQKDKVAELENSEFRAFSSFKNRVYLDTVSGSLTIY 65
Query: 74 PVRHARDDAVYECVAENGVGDAVSAEASLTV 104
+ + D+ YE + N + + L V
Sbjct: 66 NLT-SSDEDEYEMESPNITD---TMKFFLYV 92
>d1biha2 b.1.1.4 (A:99-209) Hemolin {Moth (Hyalophora cecropia)
[TaxId: 7123]}
Length = 111
Score = 34.3 bits (77), Expect = 7e-04
Identities = 18/96 (18%), Positives = 25/96 (26%), Gaps = 8/96 (8%)
Query: 15 LRPRNQAVKAGGITSFYC-IARGDPIPVIQWRKNGKRVSGTQSRYM----VQEFPPGGSL 69
+ + G C + P P+I W+K + P G
Sbjct: 7 AKTHEKTPIEGRPFQLDCVLPNAYPKPLITWKKRLSGADPNADVTDFDRRITAGPDGNLY 66
Query: 70 LRIEPVRHARDDAVYECVAENGVGDAVSAEASLTVY 105
I D Y C A+N E L Y
Sbjct: 67 FTIVTKEDVSDIYKYVCTAKNAAV---DEEVVLVEY 99
>d1fp5a2 b.1.1.2 (A:439-543) Immunoglobulin heavy chain epsilon
constant domain 4, CH4-epsilon {Human (Homo sapiens)
[TaxId: 9606]}
Length = 105
Score = 33.2 bits (75), Expect = 0.001
Identities = 13/87 (14%), Positives = 27/87 (31%), Gaps = 8/87 (9%)
Query: 10 PPEITLRPRNQAVKAGGITSFYCIARGD--PIPVIQWRKNGKRV-SGTQSRYMVQEFPPG 66
PE+ + + + C+ + +QW N ++ S ++
Sbjct: 4 APEVYAFATPEWPGSRDKRTLACLIQNFMPEDISVQWLHNEVQLPDARHSTTQPRKTKGS 63
Query: 67 G----SLLRIEPVRHARDDAVYECVAE 89
G S L + + D + C A
Sbjct: 64 GFFVFSRLEVTRAEWEQKD-EFICRAV 89
>d1cqka_ b.1.1.2 (A:) Immunoglobulin heavy chain gamma constant
domain 3, CH3-gamma {Mouse (Mus musculus) [TaxId:
10090]}
Length = 101
Score = 33.1 bits (75), Expect = 0.002
Identities = 11/85 (12%), Positives = 27/85 (31%), Gaps = 6/85 (7%)
Query: 10 PPEITLRPRNQAVKAGGITSFYCIARG--DPIPVIQWRKNGKRVSGTQSRYMVQEFPPGG 67
P++ P A + S C+ ++W+ NG+ ++ + +
Sbjct: 3 APQVYTIPPPLEQMAKDLVSLTCMITDFFPEDITVEWQWNGQPAENYKNTQPIMDTDGSY 62
Query: 68 ---SLLRIEPVRHARDDAVYECVAE 89
S L ++ + + C
Sbjct: 63 FVYSKLNVQKSNWEAGN-TFTCSVL 86
>d1l6xa2 b.1.1.2 (A:342-443) Immunoglobulin heavy chain gamma
constant domain 3, CH3-gamma {Human (Homo sapiens)
[TaxId: 9606]}
Length = 102
Score = 32.3 bits (73), Expect = 0.003
Identities = 15/87 (17%), Positives = 33/87 (37%), Gaps = 10/87 (11%)
Query: 10 PPEITLRPRNQAVKAGGITSFYCIARG--DPIPVIQWRKNGKRVSGTQSRYMVQEFPPGG 67
P++ P ++ S C+ +G ++W NG+ + ++ V + G
Sbjct: 4 EPQVYTLPPSRDELTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLD--SDG 61
Query: 68 -----SLLRIEPVRHARDDAVYECVAE 89
S L ++ R + + V+ C
Sbjct: 62 SFFLYSKLTVDKSRWQQGN-VFSCSVM 87
>d1i1ca2 b.1.1.2 (A:342-443) Immunoglobulin heavy chain gamma
constant domain 3, CH3-gamma {Rat (Rattus norvegicus)
[TaxId: 10116]}
Length = 102
Score = 32.3 bits (73), Expect = 0.004
Identities = 12/87 (13%), Positives = 28/87 (32%), Gaps = 10/87 (11%)
Query: 10 PPEITLRPRNQAVKAGGITSFYCIARG--DPIPVIQWRKNGKRVSGTQSRYMVQEFPPGG 67
P++ + S C+ +G P +W+ NG+ ++ + G
Sbjct: 4 GPQVYTMAPPKEEMTQSQVSITCMVKGFYPPDIYTEWKMNGQPQENYKNTPPTMD--TDG 61
Query: 68 -----SLLRIEPVRHARDDAVYECVAE 89
S L ++ + + + C
Sbjct: 62 SYFLYSKLNVKKETWQQGN-TFTCSVL 87
>d1k5nb_ b.1.1.2 (B:) beta2-microglobulin {Human (Homo sapiens)
[TaxId: 9606]}
Length = 100
Score = 31.9 bits (72), Expect = 0.004
Identities = 13/82 (15%), Positives = 23/82 (28%), Gaps = 4/82 (4%)
Query: 10 PPEITLRPRNQAVKAGGITSFYCIARG--DPIPVIQWRKNGKRVSGTQSRYMVQEFPPGG 67
P+I + R+ + G C G + KNG+R+ + +
Sbjct: 5 TPKIQVYSRHP-AENGKSNFLNCYVSGFHPSDIEVDLLKNGERIEKVEHSDLSFS-KDWS 62
Query: 68 SLLRIEPVRHARDDAVYECVAE 89
L + Y C
Sbjct: 63 FYLLYYTEFTPTEKDEYACRVN 84
>d1igtb4 b.1.1.2 (B:363-474) Immunoglobulin heavy chain gamma
constant domain 3, CH3-gamma {Mouse (Mus musculus),
gamma2 [TaxId: 10090]}
Length = 102
Score = 31.1 bits (70), Expect = 0.008
Identities = 15/85 (17%), Positives = 29/85 (34%), Gaps = 6/85 (7%)
Query: 10 PPEITLRPRNQAVKAGGITSFYCIARG-DPIPV-IQWRKNGKRVSGTQSRYMVQEFPP-- 65
P++ + P + + C+ P + ++W NGK ++ V +
Sbjct: 4 APQVYVLPPPEEEMTKKQVTLTCMVTDFMPEDIYVEWTNNGKTELNYKNTEPVLDSDGSY 63
Query: 66 -GGSLLRIEPVRHARDDAVYECVAE 89
S LR+E + Y C
Sbjct: 64 FMYSKLRVEKKNWVERN-SYSCSVV 87
>d1hdmb1 b.1.1.2 (B:88-185) Class II MHC beta chain, C-terminal
domain {Human (Homo sapiens), HLA-DM [TaxId: 9606]}
Length = 98
Score = 29.5 bits (66), Expect = 0.034
Identities = 19/83 (22%), Positives = 23/83 (27%), Gaps = 3/83 (3%)
Query: 9 DPPEITLRPRNQAVKAGGITSFYCIARG-DPIPV-IQWRKNGKRVSGTQSRYMVQEFPPG 66
PP + + C G P V I WRKNGK V + + Q
Sbjct: 2 RPPSVQVAKT-TPFNTREPVMLACYVWGFYPAEVTITWRKNGKLVMHSSAHKTAQPNGDW 60
Query: 67 GSLLRIEPVRHARDDAVYECVAE 89
Y CV E
Sbjct: 61 TYQTLSHLALTPSYGDTYTCVVE 83
>d2f41a1 d.38.1.5 (A:73-183) Transcription factor FapR, C-terminal
domain {Bacillus subtilis [TaxId: 1423]}
Length = 111
Score = 27.7 bits (61), Expect = 0.17
Identities = 5/49 (10%), Positives = 15/49 (30%)
Query: 57 RYMVQEFPPGGSLLRIEPVRHARDDAVYECVAENGVGDAVSAEASLTVY 105
R+ Q + + + ++ + VG+ + +Y
Sbjct: 63 RFTRQVKQGERVVAKAKVTAVEKEKGRTVVEVNSYVGEEIVFSGRFDMY 111
>d2f0xa1 d.38.1.5 (A:3-138) Hypothetical protein Them2 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 136
Score = 27.7 bits (61), Expect = 0.19
Identities = 10/97 (10%), Positives = 28/97 (28%), Gaps = 3/97 (3%)
Query: 12 EITLRPR--NQAVKAGGITSFYCIARGDPIPVIQWRKNGKRVSGTQSRYMVQEFPPGGSL 69
E+ + N G + + + ++ + VS + + G +
Sbjct: 39 EMKVEEEHTNAIGTLHGGLTATLVDNISTMALLCTERGAPGVSVDMNITYMSPAKLGEDI 98
Query: 70 -LRIEPVRHARDDAVYECVAENGVGDAVSAEASLTVY 105
+ ++ + A N + A+ T +
Sbjct: 99 VITAHVLKQGKTLAFTSVDLTNKATGKLIAQGRHTKH 135
>d1l6za1 b.1.1.1 (A:1-107) Biliary glycoprotein C (CD66a,
CEACAM1A[1,4]), N-terminal domain {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 107
Score = 27.4 bits (60), Expect = 0.21
Identities = 14/93 (15%), Positives = 25/93 (26%), Gaps = 2/93 (2%)
Query: 13 ITLRPRNQAVKAGGITSFYCIARGDPIPVIQWRKNGKRVSGTQSRYMVQEFPPGGSLLRI 72
+ L N + G +Y I ++ T Y +E L
Sbjct: 17 VLLLVHNLPLALGAFA-WYKGNTTAIDKEIARFVPNSNMNFTGQAYSGREIIYSNGSLLF 75
Query: 73 EPVRHARDDAVYECVAENGVGDAVSAEASLTVY 105
+ + +D VY + A V+
Sbjct: 76 QMIT-MKDMGVYTLDMTDENYRRTQATVRFHVH 107
>d1eaja_ b.1.1.1 (A:) Coxsackie virus and adenovirus receptor (Car),
domain 1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 124
Score = 27.6 bits (60), Expect = 0.21
Identities = 7/35 (20%), Positives = 16/35 (45%), Gaps = 2/35 (5%)
Query: 70 LRIEPVRHARDDAVYECVAENGVGDAVSAEASLTV 104
+ + ++ + D Y+C + G A + + L V
Sbjct: 90 INVTNLQLS-DIGTYQCKVKKAPGVA-NKKIHLVV 122
>d1jbja2 b.1.1.4 (A:1-100) CD3 epsilon chain ectodomain fragment
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 100
Score = 26.4 bits (58), Expect = 0.49
Identities = 5/21 (23%), Positives = 13/21 (61%)
Query: 42 IQWRKNGKRVSGTQSRYMVQE 62
++W KNG+ + +++V +
Sbjct: 29 LKWEKNGQELPQKHDKHLVLQ 49
>d2nxyb1 b.1.1.1 (B:1001-1097) CD4 V-set domains {Human (Homo
sapiens) [TaxId: 9606]}
Length = 97
Score = 25.1 bits (54), Expect = 1.3
Identities = 12/82 (14%), Positives = 22/82 (26%), Gaps = 12/82 (14%)
Query: 29 SFYCIARGDPIPVIQWRKNGKRVSGTQSRYMV------QEFPPGGSLLRIEPVRHARDDA 82
+ + G ++ S+ + G L I+ ++ D
Sbjct: 22 KSIQFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRSLWDQGNFPLIIKNLK-IEDSD 80
Query: 83 VYECVAENGVGDAVSAEASLTV 104
Y C E+ E L V
Sbjct: 81 TYICEVEDQ-----KEEVQLLV 97
>d2g5ra1 b.1.1.1 (A:24-144) N-terminal domain of sialic acid binding
Ig-like lectin 7 (SIGLEC-7, p75/AIRM1) {Human (Homo
sapiens) [TaxId: 9606]}
Length = 121
Score = 25.1 bits (54), Expect = 1.6
Identities = 14/80 (17%), Positives = 20/80 (25%), Gaps = 3/80 (3%)
Query: 27 ITSFYCIARGDPIPVIQWRKNGKRV-SGTQSRYMVQEFPPGGSL-LRIEPVRHARDDAVY 84
F + V T+ R+ + P + L I R D Y
Sbjct: 40 GYWFRAGNDISWKAPVATNNPAWAVQEETRDRFHLLGDPQTKNCTLSIRDAR-MSDAGRY 98
Query: 85 ECVAENGVGDAVSAEASLTV 104
E G L+V
Sbjct: 99 FFRMEKGNIKWNYKYDQLSV 118
>d1gkra2 c.1.9.6 (A:55-379) L-hydantoinase {Arthrobacter aurescens
[TaxId: 43663]}
Length = 325
Score = 25.0 bits (53), Expect = 2.3
Identities = 15/101 (14%), Positives = 28/101 (27%), Gaps = 9/101 (8%)
Query: 5 VRFLDPP----EITLRPRNQAVKAGGITSFYCIARGDPIP-----VIQWRKNGKRVSGTQ 55
V +D +++ GGIT+ + P ++ +K +
Sbjct: 7 VHIIDMDLKNRYGRFELDSESAAVGGITTIIEMPITFPPTTTLDAFLEKKKQAGQRLKVD 66
Query: 56 SRYMVQEFPPGGSLLRIEPVRHARDDAVYECVAENGVGDAV 96
P +R A + G+ DAV
Sbjct: 67 FALYGGGVPGNLPEIRKMHDAGAVGFKSMMAASVPGMFDAV 107
>d2vhla2 c.1.9.10 (A:58-358) N-acetylglucosamine-6-phosphate
deacetylase, NagA, catalytic domain {Bacillus subtilis
[TaxId: 1423]}
Length = 301
Score = 24.8 bits (52), Expect = 2.6
Identities = 8/39 (20%), Positives = 11/39 (28%)
Query: 5 VRFLDPPEITLRPRNQAVKAGGITSFYCIARGDPIPVIQ 43
+D TL + + G TSF I
Sbjct: 13 ADTMDASFSTLDIMSSRLPEEGTTSFLATTITQEHGNIS 51
>d2ij0c1 b.1.1.1 (C:1-117) T-cell antigen receptor {Human (Homo
sapiens), beta-chain [TaxId: 9606]}
Length = 118
Score = 24.1 bits (51), Expect = 3.1
Identities = 7/34 (20%), Positives = 13/34 (38%)
Query: 13 ITLRPRNQAVKAGGITSFYCIARGDPIPVIQWRK 46
++ P VK+G C + I + W +
Sbjct: 4 VSQHPSMVIVKSGTSVKIECRSLDTNIHTMFWYR 37
>d1cfba2 b.1.2.1 (A:710-814) Neuroglian, two amino proximal Fn3
repeats {Drosophila melanogaster [TaxId: 7227]}
Length = 105
Score = 24.1 bits (51), Expect = 3.6
Identities = 13/108 (12%), Positives = 32/108 (29%), Gaps = 15/108 (13%)
Query: 4 KVRFLDPPEITLRPRNQAVKAGGITSFYCIARGDPIPVIQWRKNGKRVSGTQSRYMVQEF 63
+ +P + + +F+ +N Q+ ++ +
Sbjct: 12 VGQGTEPNNLVISWTPMPEIEHNAPNFHYYVSWKRDIPAAAWENNNIFDWRQNNIVIADQ 71
Query: 64 PPGGSL-LRIEPVRHARDDAVYECVAENGVGDAVSAEASLTVYEGEEK 110
P +++ VA N G++ A + Y GE++
Sbjct: 72 PTFVKYLIKV--------------VAINDRGESNVAAEEVVGYSGEDR 105
>d2oz4a2 b.1.1.4 (A:186-282) Intercellular adhesion molecule-1,
ICAM-1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 97
Score = 23.6 bits (51), Expect = 4.6
Identities = 7/17 (41%), Positives = 12/17 (70%)
Query: 93 GDAVSAEASLTVYEGEE 109
D+ SA+AS++V +E
Sbjct: 55 NDSFSAKASVSVTAEDE 71
>d2i5nc1 a.138.1.2 (C:1-332) Photosynthetic reaction centre
(cytochrome subunit) {Rhodopseudomonas viridis [TaxId:
1079]}
Length = 332
Score = 24.2 bits (52), Expect = 4.8
Identities = 10/47 (21%), Positives = 14/47 (29%), Gaps = 1/47 (2%)
Query: 22 VKAGGITSFYCIARGDPIPVIQWRKNGKRVSGTQSRYMVQEFPPGGS 68
V G+T + C RG P+P + E S
Sbjct: 125 VAQTGVTCYTC-HRGTPLPPYVRYLEPTLPLNNRETPTHVERVETRS 170
>d1fo0b_ b.1.1.1 (B:) T-cell antigen receptor {Mouse (Mus musculus),
beta-chain [TaxId: 10090]}
Length = 112
Score = 23.5 bits (50), Expect = 5.8
Identities = 14/97 (14%), Positives = 33/97 (34%), Gaps = 15/97 (15%)
Query: 13 ITLRPRNQAVKAGGITSFYCIARGDPIPVIQW--RKNGKRVSGTQSRYMVQEFPPGG--- 67
+ PR + V G + CI + P + W + K++ + +
Sbjct: 4 LEQNPRWRLVPRGQAVNLRCILKNSQYPWMSWYQQDLQKQLQWLFTLRSPGDKEVKSLPG 63
Query: 68 ----------SLLRIEPVRHARDDAVYECVAENGVGD 94
+ LR++ ++ +Y + + VG+
Sbjct: 64 ADYLATRVTDTELRLQVANMSQGRTLYCTCSADRVGN 100
>d1mjuh2 b.1.1.2 (H:114-230) Immunoglobulin heavy chain gamma
constant domain 1, CH1-gamma {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 102
Score = 23.1 bits (49), Expect = 6.3
Identities = 5/52 (9%), Positives = 12/52 (23%), Gaps = 2/52 (3%)
Query: 10 PPEITLRPRNQAVKAGGITSFYCIARGDPIPVI--QWRKNGKRVSGTQSRYM 59
P + +G + C+ +G + W +
Sbjct: 5 APSVYPLAPVCGDTSGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPAV 56
>d2uyzb1 d.15.1.1 (B:20-96) SUMO-1 (smt3 homologue) {Human (Homo
sapiens) [TaxId: 9606]}
Length = 77
Score = 22.8 bits (49), Expect = 8.0
Identities = 11/53 (20%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
Query: 4 KVRFLDPPEITLRPRNQAVKAGGITSFYCIARGDPIPVIQWRKNGKRVSGTQS 56
KV D EI + + + YC +G P+ +++ G+R++ +
Sbjct: 6 KVIGQDSSEIHFKVKMT-THLKKLKESYCQRQGVPMNSLRFLFEGQRIADNHT 57
>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2
{Human (Homo sapiens) [TaxId: 9606]}
Length = 269
Score = 23.4 bits (50), Expect = 8.3
Identities = 6/15 (40%), Positives = 9/15 (60%)
Query: 58 YMVQEFPPGGSLLRI 72
Y+V E+ GG L +
Sbjct: 81 YIVMEYCEGGDLASV 95
>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase
kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId:
9986]}
Length = 277
Score = 23.5 bits (50), Expect = 8.6
Identities = 3/15 (20%), Positives = 6/15 (40%)
Query: 58 YMVQEFPPGGSLLRI 72
++V + G L
Sbjct: 86 FLVFDLMKKGELFDY 100
>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 285
Score = 23.1 bits (49), Expect = 9.1
Identities = 5/19 (26%), Positives = 9/19 (47%)
Query: 54 TQSRYMVQEFPPGGSLLRI 72
++ +V E GG L +
Sbjct: 80 AEALMLVMEMAGGGPLHKF 98
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.318 0.137 0.413
Gapped
Lambda K H
0.267 0.0491 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 436,995
Number of extensions: 19215
Number of successful extensions: 196
Number of sequences better than 10.0: 1
Number of HSP's gapped: 160
Number of HSP's successfully gapped: 87
Length of query: 111
Length of database: 2,407,596
Length adjustment: 70
Effective length of query: 41
Effective length of database: 1,446,496
Effective search space: 59306336
Effective search space used: 59306336
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 47 (22.5 bits)