Your job contains 1 sequence.
>psy2445
MLLKKSDFPLGLFIVFVVHSDDYDCSGHKGSFQFKRNKAISFSIEKNISDENYLIASLAL
LSIFAGIYVVAFFIGIKCIRCCPSMYMLSDQRHLMASPSEPIFYNFQFDHMTESVLLVVE
SSDELCMTLSVQNISCPVVDLERNVQYRGQWQTVSSKGGMLLKKSDFPLGLFIVFVVHSD
DYDCSGHKGSFQFKRNKAISFSIEKNISDENYLIASLALLSIFAGIYVVAFFIGIKCIRC
CPSMYIPSPADILSPEEPTRYGIPHHFGFFYSMGMALIMEGVLSACYHVCPSHSNFQFGS
RKPKVLNDSGNEDMCYYNYLCSHPFWNLSDINHIFSNIGYVFLGFLFILITVNRERASLP
NNKRYGIPHHFGFFYSMGMALIMEGVLSACYHVCPSHSNFQFDTSFMYVIAMLSLLKIYQ
SRHPDINATAYSTFVALAFVIFVGMVGVLDETLTFYVIFTVIHVLVCMVLSAQIYYMGRW
KLDARVFHRVCGVCIADIRSGPRHCCRPMYPSRLVLLIFGNLFNWALAAAQLRYHMVNFG
TYFLAVFMVNLCLYLMFYITMKYLSGEKIMAHTGLYLAASILLWTGALYFFFNKSISWAG
TPAESRTYNRPCLVLNFYDHHDVWHVLSALAMFFSFMCLLALDDDGTYFFRVFF
The BLAST search returned 3 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy2445
(654 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|Q9NXL6 - symbol:SIDT1 "SID1 transmembrane famil... 983 2.2e-120 2
MGI|MGI:2443155 - symbol:Sidt1 "SID1 transmembrane family... 977 6.7e-119 2
UNIPROTKB|F1PQF0 - symbol:SIDT1 "Uncharacterized protein"... 976 8.5e-119 2
UNIPROTKB|J3KPQ7 - symbol:SIDT1 "SID1 transmembrane famil... 966 1.4e-118 2
UNIPROTKB|I3L776 - symbol:SIDT1 "Uncharacterized protein"... 956 1.6e-117 2
UNIPROTKB|J9P4G2 - symbol:SIDT1 "Uncharacterized protein"... 961 3.3e-117 2
UNIPROTKB|F1NBM4 - symbol:SIDT1 "Uncharacterized protein"... 967 1.3e-115 2
RGD|1559616 - symbol:Sidt1 "SID1 transmembrane family, me... 961 2.6e-115 2
UNIPROTKB|Q6Q3F5 - symbol:Sidt1 "SID1 transmembrane famil... 961 2.6e-115 2
UNIPROTKB|F1MSQ5 - symbol:F1MSQ5 "Uncharacterized protein... 943 4.2e-115 2
UNIPROTKB|F5H8L4 - symbol:SIDT2 "SID1 transmembrane famil... 967 6.1e-114 2
UNIPROTKB|Q8NBJ9 - symbol:SIDT2 "SID1 transmembrane famil... 967 6.1e-114 2
UNIPROTKB|F1NQQ9 - symbol:SIDT1 "Uncharacterized protein"... 951 6.1e-114 2
ZFIN|ZDB-GENE-030131-7356 - symbol:sidt2 "SID1 transmembr... 944 9.9e-114 2
MGI|MGI:2446134 - symbol:Sidt2 "SID1 transmembrane family... 968 1.3e-113 2
RGD|1308311 - symbol:Sidt2 "SID1 transmembrane family, me... 968 1.3e-113 2
UNIPROTKB|F1PHM1 - symbol:SIDT2 "Uncharacterized protein"... 960 2.6e-113 2
UNIPROTKB|J9P974 - symbol:SIDT2 "Uncharacterized protein"... 960 2.6e-113 2
UNIPROTKB|E1BB88 - symbol:SIDT2 "Uncharacterized protein"... 959 5.5e-113 2
UNIPROTKB|F1SJS6 - symbol:SIDT2 "Uncharacterized protein"... 954 5.5e-113 2
UNIPROTKB|C9JBG5 - symbol:SIDT2 "SID1 transmembrane famil... 938 7.1e-111 2
UNIPROTKB|F1NJG0 - symbol:F1NJG0 "Uncharacterized protein... 887 3.5e-105 2
UNIPROTKB|D4A117 - symbol:Sidt1 "SID1 transmembrane famil... 976 2.8e-98 1
UNIPROTKB|F1NZ63 - symbol:F1NZ63 "Uncharacterized protein... 833 3.9e-83 1
WB|WBGene00006477 - symbol:chup-1 species:6239 "Caenorhab... 667 1.2e-81 2
UNIPROTKB|G3N0V5 - symbol:G3N0V5 "Uncharacterized protein... 656 2.3e-64 1
DICTYBASE|DDB_G0290761 - symbol:sid1 "systemic RNA interf... 467 2.4e-44 1
WB|WBGene00004795 - symbol:sid-1 species:6239 "Caenorhabd... 238 4.2e-36 3
UNIPROTKB|Q9GZC8 - symbol:sid-1 "Systemic RNA interferenc... 238 4.2e-36 3
UNIPROTKB|G3V172 - symbol:SIDT2 "SID1 transmembrane famil... 290 9.9e-25 1
UNIPROTKB|H0YEI3 - symbol:SIDT2 "SID1 transmembrane famil... 179 9.3e-13 1
UNIPROTKB|E9PPN9 - symbol:SIDT2 "SID1 transmembrane famil... 177 1.5e-12 1
WB|WBGene00012573 - symbol:Y37H2C.1 species:6239 "Caenorh... 114 2.2e-10 3
WB|WBGene00015583 - symbol:C08A9.3 species:6239 "Caenorha... 118 2.3e-10 3
UNIPROTKB|F1MVZ5 - symbol:SIDT2 "Uncharacterized protein"... 176 4.3e-10 1
>UNIPROTKB|Q9NXL6 [details] [associations]
symbol:SIDT1 "SID1 transmembrane family member 1"
species:9606 "Homo sapiens" [GO:0016246 "RNA interference"
evidence=IEA] [GO:0033227 "dsRNA transport" evidence=IEA]
[GO:0051033 "RNA transmembrane transporter activity" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR025958
Pfam:PF13965 GO:GO:0016021 GO:GO:0016246 GO:GO:0033227
EMBL:AC055740 GO:GO:0051033 EMBL:AK000181 EMBL:AC112128
EMBL:BC117222 IPI:IPI00160775 IPI:IPI00871570 RefSeq:NP_060169.2
UniGene:Hs.591291 ProteinModelPortal:Q9NXL6 IntAct:Q9NXL6
STRING:Q9NXL6 TCDB:9.A.24.1.2 PhosphoSite:Q9NXL6 DMDM:296452905
PaxDb:Q9NXL6 PRIDE:Q9NXL6 Ensembl:ENST00000264852 GeneID:54847
KEGG:hsa:54847 UCSC:uc003eak.3 UCSC:uc021xcn.1 CTD:54847
GeneCards:GC03P113251 HGNC:HGNC:25967 HPA:HPA035862 MIM:606816
neXtProt:NX_Q9NXL6 PharmGKB:PA134923837 eggNOG:NOG75860
HOGENOM:HOG000020635 HOVERGEN:HBG079188 OrthoDB:EOG408N7H
PhylomeDB:Q9NXL6 ChiTaRS:SIDT1 GenomeRNAi:54847 NextBio:57683
ArrayExpress:Q9NXL6 Bgee:Q9NXL6 CleanEx:HS_SIDT1
Genevestigator:Q9NXL6 GermOnline:ENSG00000072858 PANTHER:PTHR32543
Uniprot:Q9NXL6
Length = 827
Score = 983 (351.1 bits), Expect = 2.2e-120, Sum P(2) = 2.2e-120
Identities = 188/350 (53%), Positives = 245/350 (70%)
Query: 305 VLNDSGNEDMCYYNYLCSHPFWNLSDINHIFSNIGYVFLGFLFILITVNRE---RASLPN 361
V+N +GN+D+CYYN+LC+HP LS N+I SN+G+V LGFLF+LI + R+ R +L
Sbjct: 469 VVNVTGNQDICYYNFLCAHPLGVLSAFNNILSNLGHVLLGFLFLLIVLRRDILHRRALEA 528
Query: 362 NK----RYGIPHHFGFFYSMGMALIMEGVLSACYHVCPSHSNFQFDTSFMYVIAMLSLLK 417
YGIP HFG FY+MG+AL+MEGVLSACYHVCP++SNFQFDTSFMY+IA L +LK
Sbjct: 529 KDIFAVEYGIPKHFGLFYAMGIALMMEGVLSACYHVCPNYSNFQFDTSFMYMIAGLCMLK 588
Query: 418 IYQSRHPDINATAYSTFVALAFVIFVGMVGVL--DETLTFYVIFTVIHVLVCMVLSAQIY 475
+YQ+RHPDINA+AYS + + A VI V ++GV+ + F+VIF+ IHVL + LS QIY
Sbjct: 589 LYQTRHPDINASAYSAYASFAVVIMVTVLGVVFGKNDVWFWVIFSAIHVLASLALSTQIY 648
Query: 476 YMGRWKLDARVFHRVCGVCIADIRSGPRHCCRPMYPSRLVLLIFGNLFNWALAAAQLRYH 535
YMGR+K+D +F R V D + C RP+Y R+VLL+ GNL NW+ A L Y
Sbjct: 649 YMGRFKIDLGIFRRAAMVFYTDCI---QQCSRPLYMDRMVLLVVGNLVNWSFALFGLIYR 705
Query: 536 MVNFGTYFLAVFMVNLCLYLMFYITMKYLSGEKIMAHTGLYLAASILLWTGALYFFFNKS 595
+F +Y L +F+ NL LYL FYI MK S EK++ + A+ ++W ALYFFF
Sbjct: 706 PRDFASYMLGIFICNLLLYLAFYIIMKLRSSEKVLPVPLFCIVATAVMWAAALYFFFQNL 765
Query: 596 ISWAGTPAESRTYNRPCLVLNFYDHHDVWHVLSALAMFFSFMCLLALDDD 645
SW GTPAESR NR C++L+F+D HD+WH LSA A+FFSF+ LL LDDD
Sbjct: 766 SSWEGTPAESREKNRECILLDFFDDHDIWHFLSATALFFSFLVLLTLDDD 815
Score = 222 (83.2 bits), Expect = 2.2e-120, Sum P(2) = 2.2e-120
Identities = 49/152 (32%), Positives = 79/152 (51%)
Query: 93 HLMASPSEPIFYNFQFDHMTESVLL-VVESSDELCMTLSVQNISCPVVDLERNVQYRGQW 151
H ASPS+P ++ ++F +SV++ VV C +SVQNI CPV DL+ NV++ G +
Sbjct: 178 HFTASPSQPQYFLYKFPKDVDSVIIKVVSEMAYPCSVVSVQNIMCPVYDLDHNVEFNGVY 237
Query: 152 QTVSSKGGMLLKKSDFPLG--LFIVFVVHSDDYDCSG-------HKGSFQFKRNKAISFS 202
Q+++ K + L+K DFP G F+VFV+ +DY C G ++ +R K + +
Sbjct: 238 QSMTKKAAITLQKKDFP-GEQFFVVFVIKPEDYACGGSFFIQEKENQTWNLQRKKNLEVT 296
Query: 203 IEKNISDENYXXXXXXXXXXFAGIYVVAFFIG 234
I +I + Y F Y+ +G
Sbjct: 297 IVPSIKESVYVKSSLFSVFIFLSFYLGCLLVG 328
Score = 184 (69.8 bits), Expect = 8.0e-29, Sum P(2) = 8.0e-29
Identities = 31/38 (81%), Positives = 36/38 (94%)
Query: 261 YGIPHHFGFFYSMGMALIMEGVLSACYHVCPSHSNFQF 298
YGIP HFG FY+MG+AL+MEGVLSACYHVCP++SNFQF
Sbjct: 536 YGIPKHFGLFYAMGIALMMEGVLSACYHVCPNYSNFQF 573
Score = 81 (33.6 bits), Expect = 1.7e-105, Sum P(2) = 1.7e-105
Identities = 22/82 (26%), Positives = 35/82 (42%)
Query: 3 LKKSDFPLG--LFIVFVVHSDDYDCSG-------HKGSFQFKRNKAISFSIEKNISDENY 53
L+K DFP G F+VFV+ +DY C G ++ +R K + +I +I + Y
Sbjct: 248 LQKKDFP-GEQFFVVFVIKPEDYACGGSFFIQEKENQTWNLQRKKNLEVTIVPSIKESVY 306
Query: 54 XXXXXXXXXXFAGIYVVAFFIG 75
F Y+ +G
Sbjct: 307 VKSSLFSVFIFLSFYLGCLLVG 328
>MGI|MGI:2443155 [details] [associations]
symbol:Sidt1 "SID1 transmembrane family, member 1"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0016246 "RNA interference" evidence=IEA]
[GO:0033227 "dsRNA transport" evidence=IEA] [GO:0051033 "RNA
transmembrane transporter activity" evidence=IEA]
InterPro:IPR025958 Pfam:PF13965 MGI:MGI:2443155 GO:GO:0016021
GO:GO:0016246 GO:GO:0033227 GO:GO:0051033
GeneTree:ENSGT00390000010091 CTD:54847 eggNOG:NOG75860
HOGENOM:HOG000020635 HOVERGEN:HBG079188 OrthoDB:EOG408N7H
PANTHER:PTHR32543 EMBL:BC025888 EMBL:BC079584 IPI:IPI00119409
IPI:IPI00556910 RefSeq:NP_001152891.1 RefSeq:NP_932151.2
UniGene:Mm.242144 ProteinModelPortal:Q6AXF6 PhosphoSite:Q6AXF6
PRIDE:Q6AXF6 Ensembl:ENSMUST00000127567 Ensembl:ENSMUST00000136381
GeneID:320007 KEGG:mmu:320007 UCSC:uc007zhd.1 InParanoid:Q6AXF6
NextBio:395849 Bgee:Q6AXF6 CleanEx:MM_SIDT1 Genevestigator:Q6AXF6
GermOnline:ENSMUSG00000022696 Uniprot:Q6AXF6
Length = 827
Score = 977 (349.0 bits), Expect = 6.7e-119, Sum P(2) = 6.7e-119
Identities = 187/350 (53%), Positives = 246/350 (70%)
Query: 305 VLNDSGNEDMCYYNYLCSHPFWNLSDINHIFSNIGYVFLGFLFILITVNRE---RASLPN 361
V+N +GN+D+CYYN+LC+HP LS N+I SN+G+V LGFLF+LI + R+ R +L
Sbjct: 469 VVNVTGNQDICYYNFLCAHPLGVLSAFNNILSNLGHVLLGFLFLLIVLRRDLLHRRALEA 528
Query: 362 NK----RYGIPHHFGFFYSMGMALIMEGVLSACYHVCPSHSNFQFDTSFMYVIAMLSLLK 417
YGIP HFG FY+MG+AL+MEGVLSACYHVCP++SNFQFDTSFMY+IA L +LK
Sbjct: 529 KDIFAMEYGIPKHFGLFYAMGIALMMEGVLSACYHVCPNYSNFQFDTSFMYMIAGLCMLK 588
Query: 418 IYQSRHPDINATAYSTFVALAFVIFVGMVGVL--DETLTFYVIFTVIHVLVCMVLSAQIY 475
+YQ+RHPDINA+AYS + + A VI + ++GV+ + F++IF+ IH+L + LS QIY
Sbjct: 589 LYQTRHPDINASAYSAYASFAVVITLTVLGVVFGKNDVWFWIIFSAIHILSSLALSTQIY 648
Query: 476 YMGRWKLDARVFHRVCGVCIADIRSGPRHCCRPMYPSRLVLLIFGNLFNWALAAAQLRYH 535
YMGR+K+D +F R V D + C RP+Y R+VLLI GNL NW+ A L Y
Sbjct: 649 YMGRFKIDLGIFRRAAMVFYTDCI---QQCSRPLYMDRMVLLIVGNLVNWSFAFFGLIYR 705
Query: 536 MVNFGTYFLAVFMVNLCLYLMFYITMKYLSGEKIMAHTGLYLAASILLWTGALYFFFNKS 595
+F +Y L +F+ NL LYL FYI MK S EK++ +AA+ ++W ALYFFF
Sbjct: 706 PRDFASYMLGIFICNLLLYLAFYIIMKLRSSEKVLPLPVFCIAATAVVWAAALYFFFQNL 765
Query: 596 ISWAGTPAESRTYNRPCLVLNFYDHHDVWHVLSALAMFFSFMCLLALDDD 645
SW GTPAESR NR C++L+F+D HD+WH LSA A+FFSF+ LL LDDD
Sbjct: 766 SSWEGTPAESREKNRECVLLDFFDDHDIWHFLSATALFFSFLVLLTLDDD 815
Score = 214 (80.4 bits), Expect = 6.7e-119, Sum P(2) = 6.7e-119
Identities = 42/116 (36%), Positives = 73/116 (62%)
Query: 93 HLMASPSEPIFYNFQFDHMTESVLLVVESSDEL-CMTLSVQNISCPVVDLERNVQYRGQW 151
+ ASPS+P ++ ++F +SV++ V S C +SVQNI CPV DL+ NV++ G +
Sbjct: 178 YFTASPSQPQYFLYKFPEDVDSVIIKVVSEKAYPCSVVSVQNIMCPVYDLDHNVEFNGVY 237
Query: 152 QTVSSKGGMLLKKSDFP-LGLFIVFVVHSDDYDCSGHKGSFQFKRNKAISFSIEKN 206
Q+++ K + L+K DFP F+VFV+ +DY C G SF + N+ +++++++
Sbjct: 238 QSMTKKAAITLQKKDFPDEQFFVVFVIKPEDYACGG---SFSIQENENQTWNLQRS 290
Score = 184 (69.8 bits), Expect = 6.0e-28, Sum P(2) = 6.0e-28
Identities = 31/38 (81%), Positives = 36/38 (94%)
Query: 261 YGIPHHFGFFYSMGMALIMEGVLSACYHVCPSHSNFQF 298
YGIP HFG FY+MG+AL+MEGVLSACYHVCP++SNFQF
Sbjct: 536 YGIPKHFGLFYAMGIALMMEGVLSACYHVCPNYSNFQF 573
Score = 77 (32.2 bits), Expect = 1.9e-104, Sum P(2) = 1.9e-104
Identities = 16/46 (34%), Positives = 29/46 (63%)
Query: 3 LKKSDFP-LGLFIVFVVHSDDYDCSGHKGSFQFKRNKAISFSIEKN 47
L+K DFP F+VFV+ +DY C G SF + N+ +++++++
Sbjct: 248 LQKKDFPDEQFFVVFVIKPEDYACGG---SFSIQENENQTWNLQRS 290
Score = 40 (19.1 bits), Expect = 1.6e-100, Sum P(2) = 1.6e-100
Identities = 27/111 (24%), Positives = 44/111 (39%)
Query: 115 VLLVVESSDELCM-TLSVQNISCPVVDLERNVQYRGQWQTVSSKGGMLLKKS-------- 165
V+ V++ D C + S+Q +L+R+ + S K + +K S
Sbjct: 260 VVFVIKPEDYACGGSFSIQENENQTWNLQRSKNLKVTI-VPSIKESVYVKSSLFSIFVFL 318
Query: 166 DFPLGLFIVFVVHSDDYDCSGHKGSF---QFKRNKAISFSIEKNISD-ENY 212
F LG +V +VH + GSF N A+S I + + NY
Sbjct: 319 SFYLGCLLVVLVHHVRFQRKSIDGSFGSSDGSGNMAVSHPITASTPEGSNY 369
Score = 39 (18.8 bits), Expect = 2.0e-100, Sum P(2) = 2.0e-100
Identities = 15/50 (30%), Positives = 21/50 (42%)
Query: 8 FPLGLFIVFVVHSDDYDCSGHKGSF---QFKRNKAISFSIEKNISD-ENY 53
F LG +V +VH + GSF N A+S I + + NY
Sbjct: 320 FYLGCLLVVLVHHVRFQRKSIDGSFGSSDGSGNMAVSHPITASTPEGSNY 369
>UNIPROTKB|F1PQF0 [details] [associations]
symbol:SIDT1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051033 "RNA transmembrane transporter
activity" evidence=IEA] [GO:0033227 "dsRNA transport" evidence=IEA]
[GO:0016246 "RNA interference" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] InterPro:IPR025958 Pfam:PF13965
GO:GO:0016021 GO:GO:0016246 GO:GO:0033227 GO:GO:0051033
GeneTree:ENSGT00390000010091 PANTHER:PTHR32543 OMA:FIQEKEN
EMBL:AAEX03016989 Ensembl:ENSCAFT00000016993 Uniprot:F1PQF0
Length = 796
Score = 976 (348.6 bits), Expect = 8.5e-119, Sum P(2) = 8.5e-119
Identities = 188/350 (53%), Positives = 244/350 (69%)
Query: 305 VLNDSGNEDMCYYNYLCSHPFWNLSDINHIFSNIGYVFLGFLFILITVNRE---RASLPN 361
V N +GN+D+CYYN+LC+HP LS N+I SN+G+V LGFLF+LI + R+ R +L
Sbjct: 438 VANVTGNQDICYYNFLCAHPLGVLSAFNNILSNLGHVLLGFLFLLIVLRRDILHRRALEA 497
Query: 362 NK----RYGIPHHFGFFYSMGMALIMEGVLSACYHVCPSHSNFQFDTSFMYVIAMLSLLK 417
YGIP HFG FY+MG+AL+MEGVLSACYHVCP++SNFQFDTSFMY+IA L +LK
Sbjct: 498 KDIFAMEYGIPKHFGVFYAMGIALMMEGVLSACYHVCPNYSNFQFDTSFMYMIAGLCMLK 557
Query: 418 IYQSRHPDINATAYSTFVALAFVIFVGMVGVL--DETLTFYVIFTVIHVLVCMVLSAQIY 475
+YQ+RHPDINA+AYS + + A VI + ++GV+ L F+VIF+ IH+L + LS QIY
Sbjct: 558 LYQTRHPDINASAYSAYASFAVVITLTVLGVVFGKNDLWFWVIFSAIHILASLALSTQIY 617
Query: 476 YMGRWKLDARVFHRVCGVCIADIRSGPRHCCRPMYPSRLVLLIFGNLFNWALAAAQLRYH 535
YMGR+K+D +F R V D + C RP+Y R+VLLI GNL NW+ A L Y
Sbjct: 618 YMGRFKIDLGIFRRAALVFYTDF---VQQCSRPLYMDRMVLLIVGNLVNWSFALFGLIYR 674
Query: 536 MVNFGTYFLAVFMVNLCLYLMFYITMKYLSGEKIMAHTGLYLAASILLWTGALYFFFNKS 595
+F +Y L +F+ NL LYL FYI MK S EK++ + A+ ++W ALYFFF
Sbjct: 675 PRDFASYMLGIFICNLLLYLAFYIIMKLRSSEKLLPIPLFCIVATAVMWAAALYFFFQNL 734
Query: 596 ISWAGTPAESRTYNRPCLVLNFYDHHDVWHVLSALAMFFSFMCLLALDDD 645
+W GTPAESR NR C++L+F+D HDVWH LSA A+FFSF+ LL LDDD
Sbjct: 735 STWEGTPAESREKNRECILLDFFDDHDVWHFLSATALFFSFLVLLTLDDD 784
Score = 214 (80.4 bits), Expect = 8.5e-119, Sum P(2) = 8.5e-119
Identities = 48/120 (40%), Positives = 72/120 (60%)
Query: 93 HLMASPSEPIFYNFQFDHMTESVLLVVESSDEL-CMTLSVQNISCPVVDLERNVQYRGQW 151
H ASPS+P ++ ++F +SV++ V S C +SVQNI CPV DL+ NV++ G +
Sbjct: 147 HFTASPSQPQYFLYKFPDDVDSVIIKVGSEMAYPCSVVSVQNIMCPVYDLDHNVEFNGVY 206
Query: 152 QTVSSKGGMLLKKSDFPLG--LFIVFVVHSDDYDCSGHKGSF--QFKRNKAISFSIEKNI 207
Q+++ K + L+K DFP G F+VFV+ +DY C G SF Q K N+ + KN+
Sbjct: 207 QSMTKKAAITLQKKDFP-GEQFFVVFVIKPEDYACGG---SFFIQGKENQTWNLQRTKNL 262
Score = 183 (69.5 bits), Expect = 6.8e-28, Sum P(2) = 6.8e-28
Identities = 31/38 (81%), Positives = 36/38 (94%)
Query: 261 YGIPHHFGFFYSMGMALIMEGVLSACYHVCPSHSNFQF 298
YGIP HFG FY+MG+AL+MEGVLSACYHVCP++SNFQF
Sbjct: 505 YGIPKHFGVFYAMGIALMMEGVLSACYHVCPNYSNFQF 542
Score = 74 (31.1 bits), Expect = 5.1e-104, Sum P(2) = 5.1e-104
Identities = 19/48 (39%), Positives = 26/48 (54%)
Query: 3 LKKSDFPLG--LFIVFVVHSDDYDCSGHKGSFQFKRNKAISFSIEKNI 48
L+K DFP G F+VFV+ +DY C G Q K N+ + KN+
Sbjct: 217 LQKKDFP-GEQFFVVFVIKPEDYACGG-SFFIQGKENQTWNLQRTKNL 262
>UNIPROTKB|J3KPQ7 [details] [associations]
symbol:SIDT1 "SID1 transmembrane family member 1"
species:9606 "Homo sapiens" [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0016246 "RNA interference" evidence=IEA]
[GO:0033227 "dsRNA transport" evidence=IEA] [GO:0051033 "RNA
transmembrane transporter activity" evidence=IEA]
InterPro:IPR025958 Pfam:PF13965 GO:GO:0016021 GO:GO:0016246
GO:GO:0033227 EMBL:AC055740 GO:GO:0051033 EMBL:AC112128
HGNC:HGNC:25967 ChiTaRS:SIDT1 PANTHER:PTHR32543
Ensembl:ENST00000393830 OMA:FIQEKEN Uniprot:J3KPQ7
Length = 832
Score = 966 (345.1 bits), Expect = 1.4e-118, Sum P(2) = 1.4e-118
Identities = 188/355 (52%), Positives = 245/355 (69%)
Query: 305 VLNDSGNEDMCYYNYLCSHPFWNLSDINHIFSNIGYVFLGFLFILITVNRE---RASLPN 361
V+N +GN+D+CYYN+LC+HP LS N+I SN+G+V LGFLF+LI + R+ R +L
Sbjct: 469 VVNVTGNQDICYYNFLCAHPLGVLSAFNNILSNLGHVLLGFLFLLIVLRRDILHRRALEA 528
Query: 362 NK----RYGIPHHFGFFYSMGMALIMEGVLSACYHVCPSHSNFQFDTSFMYVIAMLSLLK 417
YGIP HFG FY+MG+AL+MEGVLSACYHVCP++SNFQFDTSFMY+IA L +LK
Sbjct: 529 KDIFAVEYGIPKHFGLFYAMGIALMMEGVLSACYHVCPNYSNFQFDTSFMYMIAGLCMLK 588
Query: 418 IYQSRHPDINATAYSTFVALAFVIFVGMVGVL--DETLTFYVIFTVIHVLVCMVLSAQIY 475
+YQ+RHPDINA+AYS + + A VI V ++GV+ + F+VIF+ IHVL + LS QIY
Sbjct: 589 LYQTRHPDINASAYSAYASFAVVIMVTVLGVVFGKNDVWFWVIFSAIHVLASLALSTQIY 648
Query: 476 YMGRWKL-----DARVFHRVCGVCIADIRSGPRHCCRPMYPSRLVLLIFGNLFNWALAAA 530
YMGR+K+ D +F R V D + C RP+Y R+VLL+ GNL NW+ A
Sbjct: 649 YMGRFKIAITPTDLGIFRRAAMVFYTDCI---QQCSRPLYMDRMVLLVVGNLVNWSFALF 705
Query: 531 QLRYHMVNFGTYFLAVFMVNLCLYLMFYITMKYLSGEKIMAHTGLYLAASILLWTGALYF 590
L Y +F +Y L +F+ NL LYL FYI MK S EK++ + A+ ++W ALYF
Sbjct: 706 GLIYRPRDFASYMLGIFICNLLLYLAFYIIMKLRSSEKVLPVPLFCIVATAVMWAAALYF 765
Query: 591 FFNKSISWAGTPAESRTYNRPCLVLNFYDHHDVWHVLSALAMFFSFMCLLALDDD 645
FF SW GTPAESR NR C++L+F+D HD+WH LSA A+FFSF+ LL LDDD
Sbjct: 766 FFQNLSSWEGTPAESREKNRECILLDFFDDHDIWHFLSATALFFSFLVLLTLDDD 820
Score = 222 (83.2 bits), Expect = 1.4e-118, Sum P(2) = 1.4e-118
Identities = 49/152 (32%), Positives = 79/152 (51%)
Query: 93 HLMASPSEPIFYNFQFDHMTESVLL-VVESSDELCMTLSVQNISCPVVDLERNVQYRGQW 151
H ASPS+P ++ ++F +SV++ VV C +SVQNI CPV DL+ NV++ G +
Sbjct: 178 HFTASPSQPQYFLYKFPKDVDSVIIKVVSEMAYPCSVVSVQNIMCPVYDLDHNVEFNGVY 237
Query: 152 QTVSSKGGMLLKKSDFPLG--LFIVFVVHSDDYDCSG-------HKGSFQFKRNKAISFS 202
Q+++ K + L+K DFP G F+VFV+ +DY C G ++ +R K + +
Sbjct: 238 QSMTKKAAITLQKKDFP-GEQFFVVFVIKPEDYACGGSFFIQEKENQTWNLQRKKNLEVT 296
Query: 203 IEKNISDENYXXXXXXXXXXFAGIYVVAFFIG 234
I +I + Y F Y+ +G
Sbjct: 297 IVPSIKESVYVKSSLFSVFIFLSFYLGCLLVG 328
Score = 184 (69.8 bits), Expect = 8.1e-29, Sum P(2) = 8.1e-29
Identities = 31/38 (81%), Positives = 36/38 (94%)
Query: 261 YGIPHHFGFFYSMGMALIMEGVLSACYHVCPSHSNFQF 298
YGIP HFG FY+MG+AL+MEGVLSACYHVCP++SNFQF
Sbjct: 536 YGIPKHFGLFYAMGIALMMEGVLSACYHVCPNYSNFQF 573
Score = 81 (33.6 bits), Expect = 1.1e-103, Sum P(2) = 1.1e-103
Identities = 22/82 (26%), Positives = 35/82 (42%)
Query: 3 LKKSDFPLG--LFIVFVVHSDDYDCSG-------HKGSFQFKRNKAISFSIEKNISDENY 53
L+K DFP G F+VFV+ +DY C G ++ +R K + +I +I + Y
Sbjct: 248 LQKKDFP-GEQFFVVFVIKPEDYACGGSFFIQEKENQTWNLQRKKNLEVTIVPSIKESVY 306
Query: 54 XXXXXXXXXXFAGIYVVAFFIG 75
F Y+ +G
Sbjct: 307 VKSSLFSVFIFLSFYLGCLLVG 328
>UNIPROTKB|I3L776 [details] [associations]
symbol:SIDT1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051033 "RNA transmembrane transporter activity"
evidence=IEA] [GO:0033227 "dsRNA transport" evidence=IEA]
[GO:0016246 "RNA interference" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] InterPro:IPR025958 Pfam:PF13965
GO:GO:0016021 GO:GO:0016246 GO:GO:0033227 GO:GO:0051033
GeneTree:ENSGT00390000010091 PANTHER:PTHR32543 OMA:FIQEKEN
EMBL:CU915398 EMBL:FP312830 Ensembl:ENSSSCT00000031666
Uniprot:I3L776
Length = 832
Score = 956 (341.6 bits), Expect = 1.6e-117, Sum P(2) = 1.6e-117
Identities = 185/355 (52%), Positives = 244/355 (68%)
Query: 305 VLNDSGNEDMCYYNYLCSHPFWNLSDINHIFSNIGYVFLGFLFILITVNRE---RASLPN 361
V+N +GN+D+CYYN+LC+HP LS N+I SN+G+V LG LF+LI + R+ R +L
Sbjct: 469 VVNVTGNQDICYYNFLCAHPLGVLSAFNNILSNLGHVLLGCLFLLIVLRRDILHRRALEA 528
Query: 362 NK----RYGIPHHFGFFYSMGMALIMEGVLSACYHVCPSHSNFQFDTSFMYVIAMLSLLK 417
YGIP HFG FY+MG+AL+MEGVLSACYHVCP++SNFQFDTSFMY+IA L +LK
Sbjct: 529 KDIFAMEYGIPKHFGLFYAMGVALMMEGVLSACYHVCPNYSNFQFDTSFMYMIAGLCMLK 588
Query: 418 IYQSRHPDINATAYSTFVALAFVIFVGMVGVL--DETLTFYVIFTVIHVLVCMVLSAQIY 475
+YQ+RHPDINA+AY+ + + A VI + ++GV+ L F++IF+ IH+L + LS QIY
Sbjct: 589 LYQTRHPDINASAYAAYASFALVITLTVLGVVFGKNDLWFWIIFSAIHILASLALSTQIY 648
Query: 476 YMGRWKLDAR-----VFHRVCGVCIADIRSGPRHCCRPMYPSRLVLLIFGNLFNWALAAA 530
YMGR+K+D +F R V D + C RP+Y R+VLLI GNL NW+ A
Sbjct: 649 YMGRFKIDVSDTDLGIFRRAAMVFYTDCI---QQCSRPLYMDRMVLLIMGNLINWSFALF 705
Query: 531 QLRYHMVNFGTYFLAVFMVNLCLYLMFYITMKYLSGEKIMAHTGLYLAASILLWTGALYF 590
L Y +F +Y L +F+ NL LYL FYI MK S EK++ + A+ ++W ALYF
Sbjct: 706 GLIYRPRDFASYMLGIFICNLLLYLAFYIIMKLRSSEKVLPIPLFCIVATAVVWAAALYF 765
Query: 591 FFNKSISWAGTPAESRTYNRPCLVLNFYDHHDVWHVLSALAMFFSFMCLLALDDD 645
FF SW GTPAESR NR C++L+F+D HD+WH LSA A+FFSF+ LL LDDD
Sbjct: 766 FFQNLSSWEGTPAESREKNRECILLDFFDDHDIWHFLSATALFFSFLVLLTLDDD 820
Score = 222 (83.2 bits), Expect = 1.6e-117, Sum P(2) = 1.6e-117
Identities = 50/151 (33%), Positives = 79/151 (52%)
Query: 93 HLMASPSEPIFYNFQFDHMTESVLLVVESSDEL-CMTLSVQNISCPVVDLERNVQYRGQW 151
H ASPS+P ++ ++F +SV++ V S C +SVQNI CPV DL+ NV++ G +
Sbjct: 174 HFTASPSQPQYFLYKFPEDVDSVIIKVMSEKAYPCSVVSVQNIMCPVYDLDHNVEFNGVY 233
Query: 152 QTVSSKGGMLLKKSDFPLG--LFIVFVVHSDDYDCSG-------HKGSFQFKRNKAISFS 202
Q+++ K + L+K DFP G F+VFV+ +DY C G ++ +R K + +
Sbjct: 234 QSMTKKAAITLQKKDFP-GEQFFVVFVIKPEDYTCGGSFFIQEKENQTWNLQRAKNLKVT 292
Query: 203 IEKNISDENYXXXXXXXXXXFAGIYVVAFFI 233
I +I + Y F Y+ FI
Sbjct: 293 IVPSIKESVYVKSILLSFLIFFSFYLGCLFI 323
Score = 184 (69.8 bits), Expect = 8.1e-29, Sum P(2) = 8.1e-29
Identities = 31/38 (81%), Positives = 36/38 (94%)
Query: 261 YGIPHHFGFFYSMGMALIMEGVLSACYHVCPSHSNFQF 298
YGIP HFG FY+MG+AL+MEGVLSACYHVCP++SNFQF
Sbjct: 536 YGIPKHFGLFYAMGVALMMEGVLSACYHVCPNYSNFQF 573
Score = 79 (32.9 bits), Expect = 2.0e-102, Sum P(2) = 2.0e-102
Identities = 23/81 (28%), Positives = 35/81 (43%)
Query: 3 LKKSDFPLG--LFIVFVVHSDDYDCSG-------HKGSFQFKRNKAISFSIEKNISDENY 53
L+K DFP G F+VFV+ +DY C G ++ +R K + +I +I + Y
Sbjct: 244 LQKKDFP-GEQFFVVFVIKPEDYTCGGSFFIQEKENQTWNLQRAKNLKVTIVPSIKESVY 302
Query: 54 XXXXXXXXXXFAGIYVVAFFI 74
F Y+ FI
Sbjct: 303 VKSILLSFLIFFSFYLGCLFI 323
>UNIPROTKB|J9P4G2 [details] [associations]
symbol:SIDT1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051033 "RNA transmembrane transporter
activity" evidence=IEA] [GO:0033227 "dsRNA transport" evidence=IEA]
[GO:0016246 "RNA interference" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] InterPro:IPR025958 Pfam:PF13965
GO:GO:0016021 GO:GO:0016246 GO:GO:0033227 GO:GO:0051033
GeneTree:ENSGT00390000010091 PANTHER:PTHR32543 EMBL:AAEX03016989
Ensembl:ENSCAFT00000048513 Uniprot:J9P4G2
Length = 785
Score = 961 (343.3 bits), Expect = 3.3e-117, Sum P(2) = 3.3e-117
Identities = 188/355 (52%), Positives = 244/355 (68%)
Query: 305 VLNDSGNEDMCYYNYLCSHPFWNLSDINHIFSNIGYVFLGFLFILITVNRE---RASLPN 361
V N +GN+D+CYYN+LC+HP LS N+I SN+G+V LGFLF+LI + R+ R +L
Sbjct: 422 VANVTGNQDICYYNFLCAHPLGVLSAFNNILSNLGHVLLGFLFLLIVLRRDILHRRALEA 481
Query: 362 NK----RYGIPHHFGFFYSMGMALIMEGVLSACYHVCPSHSNFQFDTSFMYVIAMLSLLK 417
YGIP HFG FY+MG+AL+MEGVLSACYHVCP++SNFQFDTSFMY+IA L +LK
Sbjct: 482 KDIFAMEYGIPKHFGVFYAMGIALMMEGVLSACYHVCPNYSNFQFDTSFMYMIAGLCMLK 541
Query: 418 IYQSRHPDINATAYSTFVALAFVIFVGMVGVL--DETLTFYVIFTVIHVLVCMVLSAQIY 475
+YQ+RHPDINA+AYS + + A VI + ++GV+ L F+VIF+ IH+L + LS QIY
Sbjct: 542 LYQTRHPDINASAYSAYASFAVVITLTVLGVVFGKNDLWFWVIFSAIHILASLALSTQIY 601
Query: 476 YMGRWKLDAR-----VFHRVCGVCIADIRSGPRHCCRPMYPSRLVLLIFGNLFNWALAAA 530
YMGR+K+D +F R V D + C RP+Y R+VLLI GNL NW+ A
Sbjct: 602 YMGRFKIDVSETDLGIFRRAALVFYTDF---VQQCSRPLYMDRMVLLIVGNLVNWSFALF 658
Query: 531 QLRYHMVNFGTYFLAVFMVNLCLYLMFYITMKYLSGEKIMAHTGLYLAASILLWTGALYF 590
L Y +F +Y L +F+ NL LYL FYI MK S EK++ + A+ ++W ALYF
Sbjct: 659 GLIYRPRDFASYMLGIFICNLLLYLAFYIIMKLRSSEKLLPIPLFCIVATAVMWAAALYF 718
Query: 591 FFNKSISWAGTPAESRTYNRPCLVLNFYDHHDVWHVLSALAMFFSFMCLLALDDD 645
FF +W GTPAESR NR C++L+F+D HDVWH LSA A+FFSF+ LL LDDD
Sbjct: 719 FFQNLSTWEGTPAESREKNRECILLDFFDDHDVWHFLSATALFFSFLVLLTLDDD 773
Score = 214 (80.4 bits), Expect = 3.3e-117, Sum P(2) = 3.3e-117
Identities = 48/120 (40%), Positives = 72/120 (60%)
Query: 93 HLMASPSEPIFYNFQFDHMTESVLLVVESSDEL-CMTLSVQNISCPVVDLERNVQYRGQW 151
H ASPS+P ++ ++F +SV++ V S C +SVQNI CPV DL+ NV++ G +
Sbjct: 131 HFTASPSQPQYFLYKFPDDVDSVIIKVGSEMAYPCSVVSVQNIMCPVYDLDHNVEFNGVY 190
Query: 152 QTVSSKGGMLLKKSDFPLG--LFIVFVVHSDDYDCSGHKGSF--QFKRNKAISFSIEKNI 207
Q+++ K + L+K DFP G F+VFV+ +DY C G SF Q K N+ + KN+
Sbjct: 191 QSMTKKAAITLQKKDFP-GEQFFVVFVIKPEDYACGG---SFFIQGKENQTWNLQRTKNL 246
Score = 183 (69.5 bits), Expect = 6.5e-28, Sum P(2) = 6.5e-28
Identities = 31/38 (81%), Positives = 36/38 (94%)
Query: 261 YGIPHHFGFFYSMGMALIMEGVLSACYHVCPSHSNFQF 298
YGIP HFG FY+MG+AL+MEGVLSACYHVCP++SNFQF
Sbjct: 489 YGIPKHFGVFYAMGIALMMEGVLSACYHVCPNYSNFQF 526
Score = 74 (31.1 bits), Expect = 2.0e-102, Sum P(2) = 2.0e-102
Identities = 19/48 (39%), Positives = 26/48 (54%)
Query: 3 LKKSDFPLG--LFIVFVVHSDDYDCSGHKGSFQFKRNKAISFSIEKNI 48
L+K DFP G F+VFV+ +DY C G Q K N+ + KN+
Sbjct: 201 LQKKDFP-GEQFFVVFVIKPEDYACGG-SFFIQGKENQTWNLQRTKNL 246
>UNIPROTKB|F1NBM4 [details] [associations]
symbol:SIDT1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016246 "RNA interference" evidence=IEA] [GO:0033227 "dsRNA
transport" evidence=IEA] [GO:0051033 "RNA transmembrane transporter
activity" evidence=IEA] InterPro:IPR025958 Pfam:PF13965
GO:GO:0016021 GO:GO:0016246 GO:GO:0033227 GO:GO:0051033
GeneTree:ENSGT00390000010091 PANTHER:PTHR32543 EMBL:AADN02037881
EMBL:AADN02037882 EMBL:AADN02037883 EMBL:AADN02037884
EMBL:AADN02037885 EMBL:AADN02037886 EMBL:AADN02037887
EMBL:AADN02037888 EMBL:AADN02037889 IPI:IPI00574149
Ensembl:ENSGALT00000023915 Uniprot:F1NBM4
Length = 760
Score = 967 (345.5 bits), Expect = 1.3e-115, Sum P(2) = 1.3e-115
Identities = 187/350 (53%), Positives = 243/350 (69%)
Query: 305 VLNDSGNEDMCYYNYLCSHPFWNLSDINHIFSNIGYVFLGFLFILITVNRE---RASLPN 361
V+N +GN+D+CYYN+LC+HP LS N+I SN+G++ LGFLF+LI + R+ R ++
Sbjct: 402 VVNVTGNQDICYYNFLCAHPLGVLSAFNNILSNVGHMLLGFLFLLIVLRRDILHRRAMEM 461
Query: 362 NK----RYGIPHHFGFFYSMGMALIMEGVLSACYHVCPSHSNFQFDTSFMYVIAMLSLLK 417
YGIP HFG FY+MG+AL+MEGVLSACYHVCP++SNFQFDTSFMY+IA L +LK
Sbjct: 462 KDVYTLDYGIPKHFGLFYAMGIALMMEGVLSACYHVCPNYSNFQFDTSFMYMIAGLCMLK 521
Query: 418 IYQSRHPDINATAYSTFVALAFVIFVGMVGVL--DETLTFYVIFTVIHVLVCMVLSAQIY 475
+YQ+RHPDINA+AYS + + A VI + ++GV + F+VIF++IHVL + LS QIY
Sbjct: 522 LYQTRHPDINASAYSAYASFAVVICLAVLGVXFGKNDVWFWVIFSLIHVLASLALSTQIY 581
Query: 476 YMGRWKLDARVFHRVCGVCIADIRSGPRHCCRPMYPSRLVLLIFGNLFNWALAAAQLRYH 535
YMGR+K+D +F R V D + C RPMY R+VLLI GNL NW+ A L Y
Sbjct: 582 YMGRFKMDLGIFRRAAMVLYTDCI---QQCSRPMYMDRMVLLIVGNLVNWSFAIFGLVYR 638
Query: 536 MVNFGTYFLAVFMVNLCLYLMFYITMKYLSGEKIMAHTGLYLAASILLWTGALYFFFNKS 595
+F +Y L +F+ NL LYL FYI MK S EK++ + A+ ++W ALYFFF
Sbjct: 639 PRDFASYILGIFICNLLLYLAFYIIMKIRSSEKLLPIPLFCIVATAVVWAAALYFFFQTL 698
Query: 596 ISWAGTPAESRTYNRPCLVLNFYDHHDVWHVLSALAMFFSFMCLLALDDD 645
SW TPAESR NR C++L F+D HDVWH LSA A+FFSF+ LL LDDD
Sbjct: 699 SSWEETPAESREKNRSCILLGFFDDHDVWHFLSAAALFFSFLVLLTLDDD 748
Score = 193 (73.0 bits), Expect = 1.3e-115, Sum P(2) = 1.3e-115
Identities = 48/162 (29%), Positives = 84/162 (51%)
Query: 96 ASPSEPIFYNFQFDHMTESVLL-VVESSDELCMTLSVQNISCPVVDLERNVQYRGQWQTV 154
ASPS+P ++ ++F +SV++ VV + C +SVQ+I CPV DL+ NV++ G +Q++
Sbjct: 108 ASPSQPQYFLYKFPQDVDSVIIKVVSDAVYPCSVVSVQDIVCPVYDLDHNVEFNGVYQSM 167
Query: 155 SSKGGMLLKKSDFPLG--LFIVFVVHSDDYDCSG------HKG---SFQFKRNKAISFSI 203
+ + + +++ DFP G F+VFV+ +DY C G H ++ +R K + +I
Sbjct: 168 TKQAAITVQRKDFP-GEQFFVVFVIKPEDYACGGSVPSSIHGNVNRTWNLQRTKNLQVTI 226
Query: 204 EKNISDENYXXXXXXXXXXFAGIYVVAFFIG-IKCIRCCPSM 244
+I Y F YV + + + IR +M
Sbjct: 227 VPSIKKSVYIQAMLFSFLSFLSFYVGSVVVAFVHYIRFSTAM 268
Score = 184 (69.8 bits), Expect = 9.6e-26, Sum P(2) = 9.6e-26
Identities = 31/38 (81%), Positives = 36/38 (94%)
Query: 261 YGIPHHFGFFYSMGMALIMEGVLSACYHVCPSHSNFQF 298
YGIP HFG FY+MG+AL+MEGVLSACYHVCP++SNFQF
Sbjct: 469 YGIPKHFGLFYAMGIALMMEGVLSACYHVCPNYSNFQF 506
Score = 67 (28.6 bits), Expect = 2.5e-102, Sum P(2) = 2.5e-102
Identities = 24/95 (25%), Positives = 40/95 (42%)
Query: 3 LKKSDFPLG--LFIVFVVHSDDYDCSG------HKG---SFQFKRNKAISFSIEKNISDE 51
+++ DFP G F+VFV+ +DY C G H ++ +R K + +I +I
Sbjct: 175 VQRKDFP-GEQFFVVFVIKPEDYACGGSVPSSIHGNVNRTWNLQRTKNLQVTIVPSIKKS 233
Query: 52 NYXXXXXXXXXXFAGIYVVAFFIG-IKCIRCCPSM 85
Y F YV + + + IR +M
Sbjct: 234 VYIQAMLFSFLSFLSFYVGSVVVAFVHYIRFSTAM 268
>RGD|1559616 [details] [associations]
symbol:Sidt1 "SID1 transmembrane family, member 1" species:10116
"Rattus norvegicus" [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0016246 "RNA interference" evidence=IEA]
[GO:0033227 "dsRNA transport" evidence=IEA] [GO:0051033 "RNA
transmembrane transporter activity" evidence=IEA]
InterPro:IPR025958 Pfam:PF13965 RGD:1559616 GO:GO:0016021
GO:GO:0016246 GO:GO:0033227 GO:GO:0051033 CTD:54847 eggNOG:NOG75860
HOVERGEN:HBG079188 OrthoDB:EOG408N7H PANTHER:PTHR32543
EMBL:AY562215 IPI:IPI00765704 RefSeq:NP_001094123.1
UniGene:Rn.51246 PRIDE:Q6Q3F5 GeneID:288109 KEGG:rno:288109
UCSC:RGD:1559616 HOGENOM:HOG000068019 InParanoid:Q6Q3F5
NextBio:627624 Genevestigator:Q6Q3F5 GermOnline:ENSRNOG00000002013
Uniprot:Q6Q3F5
Length = 831
Score = 961 (343.3 bits), Expect = 2.6e-115, Sum P(2) = 2.6e-115
Identities = 187/355 (52%), Positives = 244/355 (68%)
Query: 305 VLNDSGNEDMCYYNYLCSHPFWNLSDINHIFSNIGYVFLGFLFILITVNRE---RASLPN 361
V+N +GN+D+CYYN+LC+HP LS N+I SN+G+V LGFLF+LI + R+ R +L
Sbjct: 468 VVNVTGNQDICYYNFLCAHPLGVLSAFNNILSNLGHVLLGFLFLLIVLRRDLLHRRALEA 527
Query: 362 NK----RYGIPHHFGFFYSMGMALIMEGVLSACYHVCPSHSNFQFDTSFMYVIAMLSLLK 417
YGIP HFG FY+MG+AL+MEGVLSACYHVCP++SNFQFDTSFMY+IA L +LK
Sbjct: 528 KDIFAMEYGIPKHFGLFYAMGIALMMEGVLSACYHVCPNYSNFQFDTSFMYMIAGLCMLK 587
Query: 418 IYQSRHPDINATAYSTFVALAFVIFVGMVGVL--DETLTFYVIFTVIHVLVCMVLSAQIY 475
+YQ+RHPDINA+AYS + + A VI + ++GV+ + F++IF+ IHVL + LS QIY
Sbjct: 588 LYQTRHPDINASAYSAYASFAVVITLTVLGVVFGKNDVWFWIIFSAIHVLASLALSTQIY 647
Query: 476 YMGRWKLDAR-----VFHRVCGVCIADIRSGPRHCCRPMYPSRLVLLIFGNLFNWALAAA 530
YMGR+K+D +F R V D + C RP+Y R+VLLI GNL NW+ A
Sbjct: 648 YMGRFKIDVSDTDLGIFRRAAMVFYTDCI---QQCSRPLYMDRMVLLIVGNLVNWSFALF 704
Query: 531 QLRYHMVNFGTYFLAVFMVNLCLYLMFYITMKYLSGEKIMAHTGLYLAASILLWTGALYF 590
L Y +F +Y L +F+ NL LYL FYI MK S EK++ + A+ ++W ALYF
Sbjct: 705 GLIYRPRDFASYMLGIFICNLLLYLAFYIIMKLRSSEKVLPLPVFCIVATAVVWAAALYF 764
Query: 591 FFNKSISWAGTPAESRTYNRPCLVLNFYDHHDVWHVLSALAMFFSFMCLLALDDD 645
FF SW GTPAESR NR C++L F+D HD+WH LSA A+FFSF+ LL LDDD
Sbjct: 765 FFQNLSSWEGTPAESREKNRECVLLGFFDDHDIWHFLSATALFFSFLVLLTLDDD 819
Score = 196 (74.1 bits), Expect = 2.6e-115, Sum P(2) = 2.6e-115
Identities = 40/116 (34%), Positives = 73/116 (62%)
Query: 93 HLMASPSEPIFYNFQFDHMTESVLLVVESSDEL-CMTLSVQNISCPVVDLERNVQYRGQW 151
+ ASPS+P ++ ++F +SV++ V S C +SVQNI CPV DL+ +V++ G +
Sbjct: 178 YFTASPSQPQYFLYKFPEDVDSVIIKVVSEKAYPCSVVSVQNIMCPVYDLDHDVEFNGVY 237
Query: 152 QTVSSKGGMLLKKSDFP-LGLFIVFVVHSDDYDCSGHKGSFQFKRNKAISFSIEKN 206
Q+++ + + L+K DFP F+VFV+ +DY C G SF + N+ +++++++
Sbjct: 238 QSMTKQAAITLQK-DFPDEQFFVVFVIKPEDYACGG---SFSIQENENQTWNLQRS 289
Score = 184 (69.8 bits), Expect = 5.9e-26, Sum P(2) = 5.9e-26
Identities = 31/38 (81%), Positives = 36/38 (94%)
Query: 261 YGIPHHFGFFYSMGMALIMEGVLSACYHVCPSHSNFQF 298
YGIP HFG FY+MG+AL+MEGVLSACYHVCP++SNFQF
Sbjct: 535 YGIPKHFGLFYAMGIALMMEGVLSACYHVCPNYSNFQF 572
Score = 68 (29.0 bits), Expect = 8.4e-102, Sum P(2) = 8.4e-102
Identities = 14/44 (31%), Positives = 27/44 (61%)
Query: 5 KSDFP-LGLFIVFVVHSDDYDCSGHKGSFQFKRNKAISFSIEKN 47
+ DFP F+VFV+ +DY C G SF + N+ +++++++
Sbjct: 249 QKDFPDEQFFVVFVIKPEDYACGG---SFSIQENENQTWNLQRS 289
Score = 46 (21.3 bits), Expect = 1.8e-99, Sum P(2) = 1.8e-99
Identities = 30/111 (27%), Positives = 45/111 (40%)
Query: 115 VLLVVESSDELCM-TLSVQNISCPVVDLERNVQYRGQWQTVSSKGGMLLKKS-------- 165
V+ V++ D C + S+Q +L+R+ + S KG + +K S
Sbjct: 259 VVFVIKPEDYACGGSFSIQENENQTWNLQRSKNLKVTI-VPSVKGSVYVKSSLFSVFVFL 317
Query: 166 DFPLG-LFIVFVVHS--DDYDCSGHKGSFQFKRNKAISFSIEKNISD-ENY 212
F LG L +VFV H G GS N A+S I + + NY
Sbjct: 318 SFYLGCLLVVFVHHMRFQRKPVDGSFGSGDGSGNMAVSHPITASTPEGSNY 368
>UNIPROTKB|Q6Q3F5 [details] [associations]
symbol:Sidt1 "SID1 transmembrane family member 1"
species:10116 "Rattus norvegicus" [GO:0016246 "RNA interference"
evidence=IEA] [GO:0033227 "dsRNA transport" evidence=IEA]
[GO:0051033 "RNA transmembrane transporter activity" evidence=IEA]
InterPro:IPR025958 Pfam:PF13965 RGD:1559616 GO:GO:0016021
GO:GO:0016246 GO:GO:0033227 GO:GO:0051033 CTD:54847 eggNOG:NOG75860
HOVERGEN:HBG079188 OrthoDB:EOG408N7H PANTHER:PTHR32543
EMBL:AY562215 IPI:IPI00765704 RefSeq:NP_001094123.1
UniGene:Rn.51246 PRIDE:Q6Q3F5 GeneID:288109 KEGG:rno:288109
UCSC:RGD:1559616 HOGENOM:HOG000068019 InParanoid:Q6Q3F5
NextBio:627624 Genevestigator:Q6Q3F5 GermOnline:ENSRNOG00000002013
Uniprot:Q6Q3F5
Length = 831
Score = 961 (343.3 bits), Expect = 2.6e-115, Sum P(2) = 2.6e-115
Identities = 187/355 (52%), Positives = 244/355 (68%)
Query: 305 VLNDSGNEDMCYYNYLCSHPFWNLSDINHIFSNIGYVFLGFLFILITVNRE---RASLPN 361
V+N +GN+D+CYYN+LC+HP LS N+I SN+G+V LGFLF+LI + R+ R +L
Sbjct: 468 VVNVTGNQDICYYNFLCAHPLGVLSAFNNILSNLGHVLLGFLFLLIVLRRDLLHRRALEA 527
Query: 362 NK----RYGIPHHFGFFYSMGMALIMEGVLSACYHVCPSHSNFQFDTSFMYVIAMLSLLK 417
YGIP HFG FY+MG+AL+MEGVLSACYHVCP++SNFQFDTSFMY+IA L +LK
Sbjct: 528 KDIFAMEYGIPKHFGLFYAMGIALMMEGVLSACYHVCPNYSNFQFDTSFMYMIAGLCMLK 587
Query: 418 IYQSRHPDINATAYSTFVALAFVIFVGMVGVL--DETLTFYVIFTVIHVLVCMVLSAQIY 475
+YQ+RHPDINA+AYS + + A VI + ++GV+ + F++IF+ IHVL + LS QIY
Sbjct: 588 LYQTRHPDINASAYSAYASFAVVITLTVLGVVFGKNDVWFWIIFSAIHVLASLALSTQIY 647
Query: 476 YMGRWKLDAR-----VFHRVCGVCIADIRSGPRHCCRPMYPSRLVLLIFGNLFNWALAAA 530
YMGR+K+D +F R V D + C RP+Y R+VLLI GNL NW+ A
Sbjct: 648 YMGRFKIDVSDTDLGIFRRAAMVFYTDCI---QQCSRPLYMDRMVLLIVGNLVNWSFALF 704
Query: 531 QLRYHMVNFGTYFLAVFMVNLCLYLMFYITMKYLSGEKIMAHTGLYLAASILLWTGALYF 590
L Y +F +Y L +F+ NL LYL FYI MK S EK++ + A+ ++W ALYF
Sbjct: 705 GLIYRPRDFASYMLGIFICNLLLYLAFYIIMKLRSSEKVLPLPVFCIVATAVVWAAALYF 764
Query: 591 FFNKSISWAGTPAESRTYNRPCLVLNFYDHHDVWHVLSALAMFFSFMCLLALDDD 645
FF SW GTPAESR NR C++L F+D HD+WH LSA A+FFSF+ LL LDDD
Sbjct: 765 FFQNLSSWEGTPAESREKNRECVLLGFFDDHDIWHFLSATALFFSFLVLLTLDDD 819
Score = 196 (74.1 bits), Expect = 2.6e-115, Sum P(2) = 2.6e-115
Identities = 40/116 (34%), Positives = 73/116 (62%)
Query: 93 HLMASPSEPIFYNFQFDHMTESVLLVVESSDEL-CMTLSVQNISCPVVDLERNVQYRGQW 151
+ ASPS+P ++ ++F +SV++ V S C +SVQNI CPV DL+ +V++ G +
Sbjct: 178 YFTASPSQPQYFLYKFPEDVDSVIIKVVSEKAYPCSVVSVQNIMCPVYDLDHDVEFNGVY 237
Query: 152 QTVSSKGGMLLKKSDFP-LGLFIVFVVHSDDYDCSGHKGSFQFKRNKAISFSIEKN 206
Q+++ + + L+K DFP F+VFV+ +DY C G SF + N+ +++++++
Sbjct: 238 QSMTKQAAITLQK-DFPDEQFFVVFVIKPEDYACGG---SFSIQENENQTWNLQRS 289
Score = 184 (69.8 bits), Expect = 5.9e-26, Sum P(2) = 5.9e-26
Identities = 31/38 (81%), Positives = 36/38 (94%)
Query: 261 YGIPHHFGFFYSMGMALIMEGVLSACYHVCPSHSNFQF 298
YGIP HFG FY+MG+AL+MEGVLSACYHVCP++SNFQF
Sbjct: 535 YGIPKHFGLFYAMGIALMMEGVLSACYHVCPNYSNFQF 572
Score = 68 (29.0 bits), Expect = 8.4e-102, Sum P(2) = 8.4e-102
Identities = 14/44 (31%), Positives = 27/44 (61%)
Query: 5 KSDFP-LGLFIVFVVHSDDYDCSGHKGSFQFKRNKAISFSIEKN 47
+ DFP F+VFV+ +DY C G SF + N+ +++++++
Sbjct: 249 QKDFPDEQFFVVFVIKPEDYACGG---SFSIQENENQTWNLQRS 289
Score = 46 (21.3 bits), Expect = 1.8e-99, Sum P(2) = 1.8e-99
Identities = 30/111 (27%), Positives = 45/111 (40%)
Query: 115 VLLVVESSDELCM-TLSVQNISCPVVDLERNVQYRGQWQTVSSKGGMLLKKS-------- 165
V+ V++ D C + S+Q +L+R+ + S KG + +K S
Sbjct: 259 VVFVIKPEDYACGGSFSIQENENQTWNLQRSKNLKVTI-VPSVKGSVYVKSSLFSVFVFL 317
Query: 166 DFPLG-LFIVFVVHS--DDYDCSGHKGSFQFKRNKAISFSIEKNISD-ENY 212
F LG L +VFV H G GS N A+S I + + NY
Sbjct: 318 SFYLGCLLVVFVHHMRFQRKPVDGSFGSGDGSGNMAVSHPITASTPEGSNY 368
>UNIPROTKB|F1MSQ5 [details] [associations]
symbol:F1MSQ5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051033 "RNA transmembrane transporter activity"
evidence=IEA] [GO:0033227 "dsRNA transport" evidence=IEA]
[GO:0016246 "RNA interference" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] InterPro:IPR025958 Pfam:PF13965
GO:GO:0016021 GO:GO:0016246 GO:GO:0033227 GO:GO:0051033
GeneTree:ENSGT00390000010091 PANTHER:PTHR32543 OMA:FIQEKEN
EMBL:DAAA02001398 EMBL:DAAA02001397 IPI:IPI00686301
Ensembl:ENSBTAT00000017678 Uniprot:F1MSQ5
Length = 770
Score = 943 (337.0 bits), Expect = 4.2e-115, Sum P(2) = 4.2e-115
Identities = 184/351 (52%), Positives = 244/351 (69%)
Query: 305 VLNDSGNEDMCYYNYLCSHPFWNLSDINHIFSNIGYVFLGFLFILITVNRE---RASLPN 361
V+N +GN+D+C+YN+LC+HP LS N+I SN+G+V LG LF+LI ++R+ R +L
Sbjct: 411 VVNVTGNQDICFYNFLCAHPLGVLSAFNNILSNLGHVLLGCLFLLIVLHRDILHRRALEA 470
Query: 362 NK----RYGIPHHFGFFYSMGMALIMEGVLSACYHVCPSHSNFQFDTSFMYVIAMLSLLK 417
YGIP HFG FY+MG+AL+MEGVLSACYHVCP++SNFQFDTSFMY+IA L +LK
Sbjct: 471 KDIFAMEYGIPKHFGLFYAMGIALMMEGVLSACYHVCPNYSNFQFDTSFMYMIAGLCMLK 530
Query: 418 IYQSRHPDINATAYSTFVALAFVIFVGMVGVL--DETLTFYVIFTVIHVLVCMVLSAQIY 475
+YQ+RHPDINA+AY+ + + A VI + ++GV+ + F+VIF+ IH+L + LS QIY
Sbjct: 531 LYQTRHPDINASAYAAYASFALVITLTVLGVVFGKNDMWFWVIFSAIHILASLALSTQIY 590
Query: 476 YMGRWKL-DARVFHRVCGVCIADIRSGPRHCCRPMYPSRLVLLIFGNLFNWALAAAQLRY 534
YMGR+K+ D +F R V D + RP+Y R+VLLI GNL NW+ A L Y
Sbjct: 591 YMGRFKIADWGIFRRAAVVFYTDCI---QQRSRPLYMDRMVLLIVGNLVNWSFALFGLIY 647
Query: 535 HMVNFGTYFLAVFMVNLCLYLMFYITMKYLSGEKIMAHTGLYLAASILLWTGALYFFFNK 594
+F +Y L +F+ NL LYL FYI MK S EKI+ + A+ ++W ALYFFF
Sbjct: 648 RPRDFASYMLGIFICNLLLYLAFYIIMKLRSSEKILLIPLFCIVATAVVWAAALYFFFQN 707
Query: 595 SISWAGTPAESRTYNRPCLVLNFYDHHDVWHVLSALAMFFSFMCLLALDDD 645
SW GTPAESR NR C++L+F+D HD+WH LSA A+FFSF+ LL LDDD
Sbjct: 708 LSSWEGTPAESREKNRECILLDFFDDHDIWHFLSATALFFSFLVLLTLDDD 758
Score = 212 (79.7 bits), Expect = 4.2e-115, Sum P(2) = 4.2e-115
Identities = 45/118 (38%), Positives = 70/118 (59%)
Query: 93 HLMASPSEPIFYNFQFDHMTESVLL-VVESSDELCMTLSVQNISCPVVDLERNVQYRGQW 151
H ASPS+P ++ ++F +SV++ VV + C +SVQNI CPV DL+ NV++ G +
Sbjct: 101 HFTASPSQPQYFLYKFPEDVDSVIIKVVSTLAYPCSVVSVQNIMCPVYDLDHNVEFNGVY 160
Query: 152 QTVSSKGGMLLKKSDFPLG--LFIVFVVHSDDYDCSGHKGSFQFKRNKAISFSIEKNI 207
Q+++ K + L+K DFP G F+VFV+ +DY C G K N+ + KN+
Sbjct: 161 QSMTKKAAITLQKKDFP-GEQFFVVFVIKPEDYACGGSFFIQAEKENQTWNLQRAKNL 217
Score = 184 (69.8 bits), Expect = 8.1e-28, Sum P(2) = 8.1e-28
Identities = 31/38 (81%), Positives = 36/38 (94%)
Query: 261 YGIPHHFGFFYSMGMALIMEGVLSACYHVCPSHSNFQF 298
YGIP HFG FY+MG+AL+MEGVLSACYHVCP++SNFQF
Sbjct: 478 YGIPKHFGLFYAMGIALMMEGVLSACYHVCPNYSNFQF 515
Score = 70 (29.7 bits), Expect = 4.1e-100, Sum P(2) = 4.1e-100
Identities = 18/48 (37%), Positives = 25/48 (52%)
Query: 3 LKKSDFPLG--LFIVFVVHSDDYDCSGHKGSFQFKRNKAISFSIEKNI 48
L+K DFP G F+VFV+ +DY C G K N+ + KN+
Sbjct: 171 LQKKDFP-GEQFFVVFVIKPEDYACGGSFFIQAEKENQTWNLQRAKNL 217
Score = 44 (20.5 bits), Expect = 3.2e-13, Sum P(2) = 3.2e-13
Identities = 22/106 (20%), Positives = 48/106 (45%)
Query: 525 WALAAAQ-LRYHMV--NFGTYFLAVFMVNLCLYLMFYITMKYLSGEKIMAHTGLYLAASI 581
W L A+ L+ +V + G+ ++ +++ ++ FY+ +++ H Y+
Sbjct: 209 WNLQRAKNLQVTIVPSSKGSVYVKAILLSFLIFFSFYLGCLFVA----FIH---YIRRK- 260
Query: 582 LLWTGALYFFFNKSISWAG-TPAESRTYNRPCLVLNFYDHHDVWHV 626
G L FF + S S++G + A Y++ C F ++ W +
Sbjct: 261 ---KGTLLFFIDLSCSFSGGSKALCPNYSQSCPWPRF-NYFSPWSI 302
>UNIPROTKB|F5H8L4 [details] [associations]
symbol:SIDT2 "SID1 transmembrane family member 2"
species:9606 "Homo sapiens" [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0016246 "RNA interference" evidence=IEA]
[GO:0033227 "dsRNA transport" evidence=IEA] [GO:0051033 "RNA
transmembrane transporter activity" evidence=IEA]
InterPro:IPR025958 Pfam:PF13965 GO:GO:0016021 GO:GO:0016246
GO:GO:0033227 EMBL:AP005018 GO:GO:0051033 PANTHER:PTHR32543
HGNC:HGNC:24272 ChiTaRS:SIDT2 IPI:IPI00983846
Ensembl:ENST00000431081 UCSC:uc001pqi.1 ArrayExpress:F5H8L4
Bgee:F5H8L4 Uniprot:F5H8L4
Length = 829
Score = 967 (345.5 bits), Expect = 6.1e-114, Sum P(2) = 6.1e-114
Identities = 182/350 (52%), Positives = 246/350 (70%)
Query: 305 VLNDSGNEDMCYYNYLCSHPFWNLSDINHIFSNIGYVFLGFLFILITVNRE----RASLP 360
V+N +GN+D+CYYN+LC+HP NLS N+I SN+GY+ LG LF+LI + RE RA L
Sbjct: 471 VVNVTGNQDICYYNFLCAHPLGNLSAFNNILSNLGYILLGLLFLLIILQREINHNRALLR 530
Query: 361 NNK---RYGIPHHFGFFYSMGMALIMEGVLSACYHVCPSHSNFQFDTSFMYVIAMLSLLK 417
N+ GIP HFG FY+MG AL+MEG+LSACYHVCP+++NFQFDTSFMY+IA L +LK
Sbjct: 531 NDLCALECGIPKHFGLFYAMGTALMMEGLLSACYHVCPNYTNFQFDTSFMYMIAGLCMLK 590
Query: 418 IYQSRHPDINATAYSTFVALAFVIFVGMVGVL--DETLTFYVIFTVIHVLVCMVLSAQIY 475
+YQ RHPDINA+AYS + LA VIF ++GV+ F+++F++IH++ ++LS Q+Y
Sbjct: 591 LYQKRHPDINASAYSAYACLAIVIFFSVLGVVFGKGNTAFWIVFSIIHIIATLLLSTQLY 650
Query: 476 YMGRWKLDARVFHRVCGVCIADIRSGPRHCCRPMYPSRLVLLIFGNLFNWALAAAQLRYH 535
YMGRWKLD+ +F R+ V D R C P+Y R+VLL+ GN+ NW+LAA L
Sbjct: 651 YMGRWKLDSGIFRRILHVLYTDCI---RQCSGPLYVDRMVLLVMGNVINWSLAAYGLIMR 707
Query: 536 MVNFGTYFLAVFMVNLCLYLMFYITMKYLSGEKIMAHTGLYLAASILLWTGALYFFFNKS 595
+F +Y LA+ + NL LY FYI MK SGE+I L + + ++W AL+FFF
Sbjct: 708 PNDFASYLLAIGICNLLLYFAFYIIMKLRSGERIKLIPLLCIVCTSVVWGFALFFFFQGL 767
Query: 596 ISWAGTPAESRTYNRPCLVLNFYDHHDVWHVLSALAMFFSFMCLLALDDD 645
+W TPAESR +NR C++L+F+D HD+WH LS++AMF SF+ LL LDDD
Sbjct: 768 STWQKTPAESREHNRDCILLDFFDDHDIWHFLSSIAMFGSFLVLLTLDDD 817
Score = 177 (67.4 bits), Expect = 6.1e-114, Sum P(2) = 6.1e-114
Identities = 39/155 (25%), Positives = 76/155 (49%)
Query: 90 DQRHLMASPSEPIFYNFQFDHMTESVLLVVESSDEL-CMTLSVQNISCPVVDLERNVQYR 148
+Q + ++P ++ ++F +SV++ V S+ C +S+Q++ CPV DL+ NV +
Sbjct: 160 EQFSFNTTAAQPQYFKYEFPEGVDSVIVKVTSNKAFPCSVISIQDVLCPVYDLDNNVAFI 219
Query: 149 GQWQTVSSKGGMLLKKSDFPLGLF-IVFVVHSDDYDCSGHKGSFQFK---------RNKA 198
G +QT++ K + +++ DFP F +V VV ++D C G + F R K
Sbjct: 220 GMYQTMTKKAAITVQRKDFPSNSFYVVVVVKTEDQACGGSLPFYPFAEDEPVDQGHRQKT 279
Query: 199 ISFSIEKNISDENYXXXXXXXXXXFAGIYVVAFFI 233
+S + + ++ E Y F Y++ +
Sbjct: 280 LSVLVSQAVTSEAYVSGMLFCLGIFLSFYLLTVLL 314
Score = 169 (64.5 bits), Expect = 2.6e-22, Sum P(2) = 2.6e-22
Identities = 28/37 (75%), Positives = 34/37 (91%)
Query: 262 GIPHHFGFFYSMGMALIMEGVLSACYHVCPSHSNFQF 298
GIP HFG FY+MG AL+MEG+LSACYHVCP+++NFQF
Sbjct: 539 GIPKHFGLFYAMGTALMMEGLLSACYHVCPNYTNFQF 575
Score = 59 (25.8 bits), Expect = 1.8e-101, Sum P(2) = 1.8e-101
Identities = 18/82 (21%), Positives = 33/82 (40%)
Query: 3 LKKSDFPLGLF-IVFVVHSDDYDCSGHKGSFQFK---------RNKAISFSIEKNISDEN 52
+++ DFP F +V VV ++D C G + F R K +S + + ++ E
Sbjct: 233 VQRKDFPSNSFYVVVVVKTEDQACGGSLPFYPFAEDEPVDQGHRQKTLSVLVSQAVTSEA 292
Query: 53 YXXXXXXXXXXFAGIYVVAFFI 74
Y F Y++ +
Sbjct: 293 YVSGMLFCLGIFLSFYLLTVLL 314
>UNIPROTKB|Q8NBJ9 [details] [associations]
symbol:SIDT2 "SID1 transmembrane family member 2"
species:9606 "Homo sapiens" [GO:0016246 "RNA interference"
evidence=IEA] [GO:0033227 "dsRNA transport" evidence=IEA]
[GO:0051033 "RNA transmembrane transporter activity" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0005765
"lysosomal membrane" evidence=IDA] InterPro:IPR025958 Pfam:PF13965
GO:GO:0016021 GO:GO:0016246 GO:GO:0005765 GO:GO:0033227
GO:GO:0051033 eggNOG:NOG75860 HOGENOM:HOG000020635
HOVERGEN:HBG079188 PANTHER:PTHR32543 EMBL:AF151799 EMBL:AY358442
EMBL:AK075137 EMBL:AK075471 IPI:IPI00473077 IPI:IPI00953391
RefSeq:NP_001035545.1 UniGene:Hs.712144 ProteinModelPortal:Q8NBJ9
STRING:Q8NBJ9 PhosphoSite:Q8NBJ9 DMDM:62901098 PRIDE:Q8NBJ9
Ensembl:ENST00000324225 GeneID:51092 KEGG:hsa:51092 UCSC:uc001pqh.1
CTD:51092 GeneCards:GC11P117049 H-InvDB:HIX0010161 HGNC:HGNC:24272
neXtProt:NX_Q8NBJ9 PharmGKB:PA134910333 ChiTaRS:SIDT2
GenomeRNAi:51092 NextBio:53777 ArrayExpress:Q8NBJ9 Bgee:Q8NBJ9
CleanEx:HS_SIDT2 Genevestigator:Q8NBJ9 GermOnline:ENSG00000149577
Uniprot:Q8NBJ9
Length = 832
Score = 967 (345.5 bits), Expect = 6.1e-114, Sum P(2) = 6.1e-114
Identities = 182/350 (52%), Positives = 246/350 (70%)
Query: 305 VLNDSGNEDMCYYNYLCSHPFWNLSDINHIFSNIGYVFLGFLFILITVNRE----RASLP 360
V+N +GN+D+CYYN+LC+HP NLS N+I SN+GY+ LG LF+LI + RE RA L
Sbjct: 474 VVNVTGNQDICYYNFLCAHPLGNLSAFNNILSNLGYILLGLLFLLIILQREINHNRALLR 533
Query: 361 NNK---RYGIPHHFGFFYSMGMALIMEGVLSACYHVCPSHSNFQFDTSFMYVIAMLSLLK 417
N+ GIP HFG FY+MG AL+MEG+LSACYHVCP+++NFQFDTSFMY+IA L +LK
Sbjct: 534 NDLCALECGIPKHFGLFYAMGTALMMEGLLSACYHVCPNYTNFQFDTSFMYMIAGLCMLK 593
Query: 418 IYQSRHPDINATAYSTFVALAFVIFVGMVGVL--DETLTFYVIFTVIHVLVCMVLSAQIY 475
+YQ RHPDINA+AYS + LA VIF ++GV+ F+++F++IH++ ++LS Q+Y
Sbjct: 594 LYQKRHPDINASAYSAYACLAIVIFFSVLGVVFGKGNTAFWIVFSIIHIIATLLLSTQLY 653
Query: 476 YMGRWKLDARVFHRVCGVCIADIRSGPRHCCRPMYPSRLVLLIFGNLFNWALAAAQLRYH 535
YMGRWKLD+ +F R+ V D R C P+Y R+VLL+ GN+ NW+LAA L
Sbjct: 654 YMGRWKLDSGIFRRILHVLYTDCI---RQCSGPLYVDRMVLLVMGNVINWSLAAYGLIMR 710
Query: 536 MVNFGTYFLAVFMVNLCLYLMFYITMKYLSGEKIMAHTGLYLAASILLWTGALYFFFNKS 595
+F +Y LA+ + NL LY FYI MK SGE+I L + + ++W AL+FFF
Sbjct: 711 PNDFASYLLAIGICNLLLYFAFYIIMKLRSGERIKLIPLLCIVCTSVVWGFALFFFFQGL 770
Query: 596 ISWAGTPAESRTYNRPCLVLNFYDHHDVWHVLSALAMFFSFMCLLALDDD 645
+W TPAESR +NR C++L+F+D HD+WH LS++AMF SF+ LL LDDD
Sbjct: 771 STWQKTPAESREHNRDCILLDFFDDHDIWHFLSSIAMFGSFLVLLTLDDD 820
Score = 177 (67.4 bits), Expect = 6.1e-114, Sum P(2) = 6.1e-114
Identities = 39/155 (25%), Positives = 76/155 (49%)
Query: 90 DQRHLMASPSEPIFYNFQFDHMTESVLLVVESSDEL-CMTLSVQNISCPVVDLERNVQYR 148
+Q + ++P ++ ++F +SV++ V S+ C +S+Q++ CPV DL+ NV +
Sbjct: 160 EQFSFNTTAAQPQYFKYEFPEGVDSVIVKVTSNKAFPCSVISIQDVLCPVYDLDNNVAFI 219
Query: 149 GQWQTVSSKGGMLLKKSDFPLGLF-IVFVVHSDDYDCSGHKGSFQFK---------RNKA 198
G +QT++ K + +++ DFP F +V VV ++D C G + F R K
Sbjct: 220 GMYQTMTKKAAITVQRKDFPSNSFYVVVVVKTEDQACGGSLPFYPFAEDEPVDQGHRQKT 279
Query: 199 ISFSIEKNISDENYXXXXXXXXXXFAGIYVVAFFI 233
+S + + ++ E Y F Y++ +
Sbjct: 280 LSVLVSQAVTSEAYVSGMLFCLGIFLSFYLLTVLL 314
Score = 169 (64.5 bits), Expect = 2.6e-22, Sum P(2) = 2.6e-22
Identities = 28/37 (75%), Positives = 34/37 (91%)
Query: 262 GIPHHFGFFYSMGMALIMEGVLSACYHVCPSHSNFQF 298
GIP HFG FY+MG AL+MEG+LSACYHVCP+++NFQF
Sbjct: 542 GIPKHFGLFYAMGTALMMEGLLSACYHVCPNYTNFQF 578
Score = 59 (25.8 bits), Expect = 1.8e-101, Sum P(2) = 1.8e-101
Identities = 18/82 (21%), Positives = 33/82 (40%)
Query: 3 LKKSDFPLGLF-IVFVVHSDDYDCSGHKGSFQFK---------RNKAISFSIEKNISDEN 52
+++ DFP F +V VV ++D C G + F R K +S + + ++ E
Sbjct: 233 VQRKDFPSNSFYVVVVVKTEDQACGGSLPFYPFAEDEPVDQGHRQKTLSVLVSQAVTSEA 292
Query: 53 YXXXXXXXXXXFAGIYVVAFFI 74
Y F Y++ +
Sbjct: 293 YVSGMLFCLGIFLSFYLLTVLL 314
>UNIPROTKB|F1NQQ9 [details] [associations]
symbol:SIDT1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016246 "RNA interference" evidence=IEA] [GO:0033227 "dsRNA
transport" evidence=IEA] [GO:0051033 "RNA transmembrane transporter
activity" evidence=IEA] InterPro:IPR025958 Pfam:PF13965
GO:GO:0016021 GO:GO:0016246 GO:GO:0033227 GO:GO:0051033
GeneTree:ENSGT00390000010091 PANTHER:PTHR32543 OMA:FIQEKEN
EMBL:AADN02037881 EMBL:AADN02037882 EMBL:AADN02037883
EMBL:AADN02037884 EMBL:AADN02037885 EMBL:AADN02037886
EMBL:AADN02037887 EMBL:AADN02037888 EMBL:AADN02037889
IPI:IPI00819626 Ensembl:ENSGALT00000036979 Uniprot:F1NQQ9
Length = 765
Score = 951 (339.8 bits), Expect = 6.1e-114, Sum P(2) = 6.1e-114
Identities = 187/355 (52%), Positives = 243/355 (68%)
Query: 305 VLNDSGNEDMCYYNYLCSHPFWNLSDINHIFSNIGYVFLGFLFILITVNRE---RASLPN 361
V+N +GN+D+CYYN+LC+HP LS N+I SN+G++ LGFLF+LI + R+ R ++
Sbjct: 402 VVNVTGNQDICYYNFLCAHPLGVLSAFNNILSNVGHMLLGFLFLLIVLRRDILHRRAMEM 461
Query: 362 NK----RYGIPHHFGFFYSMGMALIMEGVLSACYHVCPSHSNFQFDTSFMYVIAMLSLLK 417
YGIP HFG FY+MG+AL+MEGVLSACYHVCP++SNFQFDTSFMY+IA L +LK
Sbjct: 462 KDVYTLDYGIPKHFGLFYAMGIALMMEGVLSACYHVCPNYSNFQFDTSFMYMIAGLCMLK 521
Query: 418 IYQSRHPDINATAYSTFVALAFVIFVGMVGVL--DETLTFYVIFTVIHVLVCMVLSAQIY 475
+YQ+RHPDINA+AYS + + A VI + ++GV + F+VIF++IHVL + LS QIY
Sbjct: 522 LYQTRHPDINASAYSAYASFAVVICLAVLGVXFGKNDVWFWVIFSLIHVLASLALSTQIY 581
Query: 476 YMGRWKLDAR-----VFHRVCGVCIADIRSGPRHCCRPMYPSRLVLLIFGNLFNWALAAA 530
YMGR+K+D +F R V D + C RPMY R+VLLI GNL NW+ A
Sbjct: 582 YMGRFKMDGPDSDLGIFRRAAMVLYTDCI---QQCSRPMYMDRMVLLIVGNLVNWSFAIF 638
Query: 531 QLRYHMVNFGTYFLAVFMVNLCLYLMFYITMKYLSGEKIMAHTGLYLAASILLWTGALYF 590
L Y +F +Y L +F+ NL LYL FYI MK S EK++ + A+ ++W ALYF
Sbjct: 639 GLVYRPRDFASYILGIFICNLLLYLAFYIIMKIRSSEKLLPIPLFCIVATAVVWAAALYF 698
Query: 591 FFNKSISWAGTPAESRTYNRPCLVLNFYDHHDVWHVLSALAMFFSFMCLLALDDD 645
FF SW TPAESR NR C++L F+D HDVWH LSA A+FFSF+ LL LDDD
Sbjct: 699 FFQTLSSWEETPAESREKNRSCILLGFFDDHDVWHFLSAAALFFSFLVLLTLDDD 753
Score = 193 (73.0 bits), Expect = 6.1e-114, Sum P(2) = 6.1e-114
Identities = 48/162 (29%), Positives = 84/162 (51%)
Query: 96 ASPSEPIFYNFQFDHMTESVLL-VVESSDELCMTLSVQNISCPVVDLERNVQYRGQWQTV 154
ASPS+P ++ ++F +SV++ VV + C +SVQ+I CPV DL+ NV++ G +Q++
Sbjct: 108 ASPSQPQYFLYKFPQDVDSVIIKVVSDAVYPCSVVSVQDIVCPVYDLDHNVEFNGVYQSM 167
Query: 155 SSKGGMLLKKSDFPLG--LFIVFVVHSDDYDCSG------HKG---SFQFKRNKAISFSI 203
+ + + +++ DFP G F+VFV+ +DY C G H ++ +R K + +I
Sbjct: 168 TKQAAITVQRKDFP-GEQFFVVFVIKPEDYACGGSVPSSIHGNVNRTWNLQRTKNLQVTI 226
Query: 204 EKNISDENYXXXXXXXXXXFAGIYVVAFFIG-IKCIRCCPSM 244
+I Y F YV + + + IR +M
Sbjct: 227 VPSIKKSVYIQAMLFSFLSFLSFYVGSVVVAFVHYIRFSTAM 268
Score = 184 (69.8 bits), Expect = 9.8e-26, Sum P(2) = 9.8e-26
Identities = 31/38 (81%), Positives = 36/38 (94%)
Query: 261 YGIPHHFGFFYSMGMALIMEGVLSACYHVCPSHSNFQF 298
YGIP HFG FY+MG+AL+MEGVLSACYHVCP++SNFQF
Sbjct: 469 YGIPKHFGLFYAMGIALMMEGVLSACYHVCPNYSNFQF 506
Score = 67 (28.6 bits), Expect = 1.2e-100, Sum P(2) = 1.2e-100
Identities = 24/95 (25%), Positives = 40/95 (42%)
Query: 3 LKKSDFPLG--LFIVFVVHSDDYDCSG------HKG---SFQFKRNKAISFSIEKNISDE 51
+++ DFP G F+VFV+ +DY C G H ++ +R K + +I +I
Sbjct: 175 VQRKDFP-GEQFFVVFVIKPEDYACGGSVPSSIHGNVNRTWNLQRTKNLQVTIVPSIKKS 233
Query: 52 NYXXXXXXXXXXFAGIYVVAFFIG-IKCIRCCPSM 85
Y F YV + + + IR +M
Sbjct: 234 VYIQAMLFSFLSFLSFYVGSVVVAFVHYIRFSTAM 268
>ZFIN|ZDB-GENE-030131-7356 [details] [associations]
symbol:sidt2 "SID1 transmembrane family, member 2"
species:7955 "Danio rerio" [GO:0051033 "RNA transmembrane
transporter activity" evidence=IEA] [GO:0016246 "RNA interference"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0033227 "dsRNA transport" evidence=IEA] InterPro:IPR025958
Pfam:PF13965 ZFIN:ZDB-GENE-030131-7356 GO:GO:0016021 GO:GO:0016246
GO:GO:0033227 GO:GO:0051033 GeneTree:ENSGT00390000010091
PANTHER:PTHR32543 EMBL:CABZ01087573 EMBL:CABZ01087574
EMBL:CABZ01087575 EMBL:CABZ01087576 EMBL:CABZ01087577
IPI:IPI01016817 Ensembl:ENSDART00000067583 ArrayExpress:F1RBH4
Bgee:F1RBH4 Uniprot:F1RBH4
Length = 842
Score = 944 (337.4 bits), Expect = 9.9e-114, Sum P(2) = 9.9e-114
Identities = 179/350 (51%), Positives = 244/350 (69%)
Query: 305 VLNDSGNEDMCYYNYLCSHPFWNLSDINHIFSNIGYVFLGFLFILITVNRE----RASLP 360
V+N +GN+D+CYYN+LC+HP LS N+I SN+GYV LG LF+LI + R+ RA
Sbjct: 484 VVNVTGNQDICYYNFLCAHPLGALSSFNNILSNLGYVLLGLLFLLIVLQRDILHNRALER 543
Query: 361 NNK---RYGIPHHFGFFYSMGMALIMEGVLSACYHVCPSHSNFQFDTSFMYVIAMLSLLK 417
N+ GIP HFG +Y+MG AL+MEG+LSACYHVCP+++NFQFDTSFMY+IA L +LK
Sbjct: 544 NDNTALECGIPKHFGLYYAMGTALMMEGLLSACYHVCPNYTNFQFDTSFMYMIAGLCMLK 603
Query: 418 IYQSRHPDINATAYSTFVALAFVIFVGMVGVL--DETLTFYVIFTVIHVLVCMVLSAQIY 475
+YQ RHPDINA+AYS + LA VIF ++GV+ + F+++F+VIH+L M+LS Q+Y
Sbjct: 604 LYQKRHPDINASAYSAYACLAAVIFFSVLGVVFGKGNMAFWIVFSVIHILATMLLSTQLY 663
Query: 476 YMGRWKLDARVFHRVCGVCIADIRSGPRHCCRPMYPSRLVLLIFGNLFNWALAAAQLRYH 535
YMGRW+LD+ + R+ V D R C PMY R+VLL+ GN+ NW+LAA L
Sbjct: 664 YMGRWRLDSGIMRRMLYVIYTDCI---RQCSGPMYIDRMVLLVMGNIVNWSLAAYGLINR 720
Query: 536 MVNFGTYFLAVFMVNLCLYLMFYITMKYLSGEKIMAHTGLYLAASILLWTGALYFFFNKS 595
+F +Y LA+ + NL LY FYI MK SGE+I + + + ++W AL+FFF
Sbjct: 721 PNDFASYLLAIAICNLLLYFAFYIIMKLRSGERIQCLALVCVLFTAVVWGFALFFFFQGL 780
Query: 596 ISWAGTPAESRTYNRPCLVLNFYDHHDVWHVLSALAMFFSFMCLLALDDD 645
+W TPAESR +NR C++L+F+D HD+WH LS++AMF SF+ LL +DDD
Sbjct: 781 STWQKTPAESREHNRECILLSFFDDHDIWHFLSSIAMFGSFLVLLTMDDD 830
Score = 198 (74.8 bits), Expect = 9.9e-114, Sum P(2) = 9.9e-114
Identities = 57/217 (26%), Positives = 100/217 (46%)
Query: 84 SMYMLSDQRHLM-ASPSEPIFYNFQFDHMTESVLLVVESSDEL-CMTLSVQNISCPVVDL 141
S+ +L+D++ A+PS+P F+ + F ++V++ V S C +S+Q+I CPV DL
Sbjct: 149 SLILLTDKKFSFNATPSQPQFFKYVFPEGVDTVIVKVNSQKNFPCSVMSIQDIQCPVYDL 208
Query: 142 ERNVQYRGQWQTVSSKGGMLLKKSDFPLGLF-IVFVVHSDDYDCSGHKGSFQF------- 193
+ NV + G +QT++++ + +++ DFP F +V VV ++D C G +
Sbjct: 209 DNNVAFIGMYQTMTTRSAITVQRKDFPSNSFYVVVVVKTEDEACGGPLRFYPLLPDELLD 268
Query: 194 --KRNKAISFSIEKNISDENYXXXXXXXXXXFAGIYVVAFFIGI----KCIRCCPSMYIP 247
R+K + + I+ E Y F Y++ F + + R + P
Sbjct: 269 AGNRSKTLDVIVSPAINSEVYVMGMLFCLGIFLSFYLLTFLVACLENKRMNRKREGLLNP 328
Query: 248 --SPADILSPEEPTRYGIPHHFGFFYSMGMALIMEGV 282
SPA+ S P+ +G F G L E V
Sbjct: 329 DTSPAETASLLGKAPVS-PYEYGSFADNGSTLSSEAV 364
Score = 166 (63.5 bits), Expect = 2.8e-24, Sum P(2) = 2.8e-24
Identities = 27/37 (72%), Positives = 34/37 (91%)
Query: 262 GIPHHFGFFYSMGMALIMEGVLSACYHVCPSHSNFQF 298
GIP HFG +Y+MG AL+MEG+LSACYHVCP+++NFQF
Sbjct: 552 GIPKHFGLYYAMGTALMMEGLLSACYHVCPNYTNFQF 588
Score = 54 (24.1 bits), Expect = 1.6e-98, Sum P(2) = 1.6e-98
Identities = 18/82 (21%), Positives = 32/82 (39%)
Query: 3 LKKSDFPLGLF-IVFVVHSDDYDCSGHKGSFQF---------KRNKAISFSIEKNISDEN 52
+++ DFP F +V VV ++D C G + R+K + + I+ E
Sbjct: 229 VQRKDFPSNSFYVVVVVKTEDEACGGPLRFYPLLPDELLDAGNRSKTLDVIVSPAINSEV 288
Query: 53 YXXXXXXXXXXFAGIYVVAFFI 74
Y F Y++ F +
Sbjct: 289 YVMGMLFCLGIFLSFYLLTFLV 310
>MGI|MGI:2446134 [details] [associations]
symbol:Sidt2 "SID1 transmembrane family, member 2"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005764 "lysosome" evidence=IEA] [GO:0005765
"lysosomal membrane" evidence=ISO;IDA] [GO:0008150
"biological_process" evidence=ND] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016246 "RNA interference" evidence=IEA] [GO:0033227 "dsRNA
transport" evidence=IEA] [GO:0051033 "RNA transmembrane transporter
activity" evidence=IEA] InterPro:IPR025958 Pfam:PF13965
MGI:MGI:2446134 GO:GO:0016021 GO:GO:0016246 GO:GO:0005765
GO:GO:0033227 GO:GO:0051033 GeneTree:ENSGT00390000010091
eggNOG:NOG75860 HOGENOM:HOG000020635 HOVERGEN:HBG079188
PANTHER:PTHR32543 CTD:51092 EMBL:BC006873 EMBL:BC023957
EMBL:BC051101 IPI:IPI00229839 IPI:IPI00330714 RefSeq:NP_758461.1
UniGene:Mm.379345 ProteinModelPortal:Q8CIF6 PhosphoSite:Q8CIF6
PRIDE:Q8CIF6 Ensembl:ENSMUST00000038488 Ensembl:ENSMUST00000114573
GeneID:214597 KEGG:mmu:214597 UCSC:uc009pgu.1 OMA:RMDDFVL
OrthoDB:EOG42FSH1 NextBio:374384 Bgee:Q8CIF6 CleanEx:MM_SIDT2
Genevestigator:Q8CIF6 GermOnline:ENSMUSG00000034908 Uniprot:Q8CIF6
Length = 832
Score = 968 (345.8 bits), Expect = 1.3e-113, Sum P(2) = 1.3e-113
Identities = 183/350 (52%), Positives = 246/350 (70%)
Query: 305 VLNDSGNEDMCYYNYLCSHPFWNLSDINHIFSNIGYVFLGFLFILITVNRE----RASLP 360
V+N +GN+D+CYYN+LC+HP NLS N+I SN+GY+ LG LF+LI + RE RA L
Sbjct: 474 VVNVTGNQDICYYNFLCAHPLGNLSAFNNILSNLGYILLGLLFLLIILQREINHNRALLR 533
Query: 361 NNK---RYGIPHHFGFFYSMGMALIMEGVLSACYHVCPSHSNFQFDTSFMYVIAMLSLLK 417
N+ GIP HFG FY+MG AL+MEG+LSACYHVCP+++NFQFDTSFMY+IA L +LK
Sbjct: 534 NDLYALECGIPKHFGLFYAMGTALMMEGLLSACYHVCPNYTNFQFDTSFMYMIAGLCMLK 593
Query: 418 IYQSRHPDINATAYSTFVALAFVIFVGMVGVL--DETLTFYVIFTVIHVLVCMVLSAQIY 475
+YQ RHPDINA+AYS + LA VIF ++GV+ F+++F+VIH++ ++LS Q+Y
Sbjct: 594 LYQKRHPDINASAYSAYACLAIVIFFSVLGVVFGKGNTAFWIVFSVIHIISTLLLSTQLY 653
Query: 476 YMGRWKLDARVFHRVCGVCIADIRSGPRHCCRPMYPSRLVLLIFGNLFNWALAAAQLRYH 535
YMGRWKLD+ +F R+ V D R C P+Y R+VLL+ GN+ NW+LAA L
Sbjct: 654 YMGRWKLDSGIFRRILHVLYTDCI---RQCSGPLYTDRMVLLVMGNIINWSLAAYGLIMR 710
Query: 536 MVNFGTYFLAVFMVNLCLYLMFYITMKYLSGEKIMAHTGLYLAASILLWTGALYFFFNKS 595
+F +Y LA+ + NL LY FYI MK SGE+I L + + ++W AL+FFF
Sbjct: 711 PNDFASYLLAIGICNLLLYFAFYIIMKLRSGERIKLIPLLCIVCTSVVWGFALFFFFQGL 770
Query: 596 ISWAGTPAESRTYNRPCLVLNFYDHHDVWHVLSALAMFFSFMCLLALDDD 645
+W TPAESR +NR C++L+F+D HD+WH LS++AMF SF+ LL LDDD
Sbjct: 771 STWQKTPAESREHNRDCILLDFFDDHDIWHFLSSIAMFGSFLVLLTLDDD 820
Score = 173 (66.0 bits), Expect = 1.3e-113, Sum P(2) = 1.3e-113
Identities = 38/146 (26%), Positives = 72/146 (49%)
Query: 99 SEPIFYNFQFDHMTESVLLVVESSDEL-CMTLSVQNISCPVVDLERNVQYRGQWQTVSSK 157
++P ++ ++F +SV++ V S C +S+Q++ CPV DL+ NV + G +QT++ K
Sbjct: 169 AQPQYFKYEFPDGVDSVIVKVTSKKAFPCSVISIQDVLCPVYDLDNNVAFIGMYQTMTKK 228
Query: 158 GGMLLKKSDFPLGLF-IVFVVHSDDYDCSGHKGSFQF---------KRNKAISFSIEKNI 207
+ +++ DFP F +V VV ++D C G + F R K +S + + +
Sbjct: 229 AAITVQRKDFPSNSFYVVVVVKTEDQACGGSLPFYPFVEDEPVDQGHRQKTLSVLVSQAV 288
Query: 208 SDENYXXXXXXXXXXFAGIYVVAFFI 233
+ E Y F Y++ +
Sbjct: 289 TSEAYVGGMLFCLGIFLSFYLLTVLL 314
Score = 169 (64.5 bits), Expect = 7.2e-22, Sum P(2) = 7.2e-22
Identities = 28/37 (75%), Positives = 34/37 (91%)
Query: 262 GIPHHFGFFYSMGMALIMEGVLSACYHVCPSHSNFQF 298
GIP HFG FY+MG AL+MEG+LSACYHVCP+++NFQF
Sbjct: 542 GIPKHFGLFYAMGTALMMEGLLSACYHVCPNYTNFQF 578
Score = 58 (25.5 bits), Expect = 1.8e-101, Sum P(2) = 1.8e-101
Identities = 18/82 (21%), Positives = 33/82 (40%)
Query: 3 LKKSDFPLGLF-IVFVVHSDDYDCSGHKGSFQF---------KRNKAISFSIEKNISDEN 52
+++ DFP F +V VV ++D C G + F R K +S + + ++ E
Sbjct: 233 VQRKDFPSNSFYVVVVVKTEDQACGGSLPFYPFVEDEPVDQGHRQKTLSVLVSQAVTSEA 292
Query: 53 YXXXXXXXXXXFAGIYVVAFFI 74
Y F Y++ +
Sbjct: 293 YVGGMLFCLGIFLSFYLLTVLL 314
>RGD|1308311 [details] [associations]
symbol:Sidt2 "SID1 transmembrane family, member 2" species:10116
"Rattus norvegicus" [GO:0005765 "lysosomal membrane"
evidence=ISO;ISS] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016246 "RNA interference" evidence=IEA] [GO:0033227 "dsRNA
transport" evidence=IEA] [GO:0051033 "RNA transmembrane transporter
activity" evidence=IEA] InterPro:IPR025958 Pfam:PF13965 RGD:1308311
GO:GO:0016021 GO:GO:0016246 GO:GO:0005765 GO:GO:0033227
EMBL:CH473975 GO:GO:0051033 GeneTree:ENSGT00390000010091
PANTHER:PTHR32543 CTD:51092 OrthoDB:EOG42FSH1 EMBL:AC096909
IPI:IPI00369576 RefSeq:NP_001101612.1 UniGene:Rn.162997
Ensembl:ENSRNOT00000024240 Ensembl:ENSRNOT00000035310 GeneID:315617
KEGG:rno:315617 NextBio:669532 Uniprot:D3ZEH5
Length = 832
Score = 968 (345.8 bits), Expect = 1.3e-113, Sum P(2) = 1.3e-113
Identities = 183/350 (52%), Positives = 246/350 (70%)
Query: 305 VLNDSGNEDMCYYNYLCSHPFWNLSDINHIFSNIGYVFLGFLFILITVNRE----RASLP 360
V+N +GN+D+CYYN+LC+HP NLS N+I SN+GY+ LG LF+LI + RE RA L
Sbjct: 474 VVNVTGNQDICYYNFLCAHPLGNLSAFNNILSNLGYILLGLLFLLIILQREINHNRALLR 533
Query: 361 NNK---RYGIPHHFGFFYSMGMALIMEGVLSACYHVCPSHSNFQFDTSFMYVIAMLSLLK 417
N+ GIP HFG FY+MG AL+MEG+LSACYHVCP+++NFQFDTSFMY+IA L +LK
Sbjct: 534 NDLYALECGIPKHFGLFYAMGTALMMEGLLSACYHVCPNYTNFQFDTSFMYMIAGLCMLK 593
Query: 418 IYQSRHPDINATAYSTFVALAFVIFVGMVGVL--DETLTFYVIFTVIHVLVCMVLSAQIY 475
+YQ RHPDINA+AYS + LA VIF ++GV+ F+++F+VIH++ ++LS Q+Y
Sbjct: 594 LYQKRHPDINASAYSAYACLAIVIFFSVLGVVFGKGNTAFWIVFSVIHIISTLLLSTQLY 653
Query: 476 YMGRWKLDARVFHRVCGVCIADIRSGPRHCCRPMYPSRLVLLIFGNLFNWALAAAQLRYH 535
YMGRWKLD+ +F R+ V D R C P+Y R+VLL+ GN+ NW+LAA L
Sbjct: 654 YMGRWKLDSGIFRRILHVLYTDCI---RQCSGPLYTDRMVLLVMGNIINWSLAAYGLIMR 710
Query: 536 MVNFGTYFLAVFMVNLCLYLMFYITMKYLSGEKIMAHTGLYLAASILLWTGALYFFFNKS 595
+F +Y LA+ + NL LY FYI MK SGE+I L + + ++W AL+FFF
Sbjct: 711 PNDFASYLLAIGICNLLLYFAFYIIMKLRSGERIKLIPLLCIVCTSVVWGFALFFFFQGL 770
Query: 596 ISWAGTPAESRTYNRPCLVLNFYDHHDVWHVLSALAMFFSFMCLLALDDD 645
+W TPAESR +NR C++L+F+D HD+WH LS++AMF SF+ LL LDDD
Sbjct: 771 STWQKTPAESREHNRDCILLDFFDDHDIWHFLSSIAMFGSFLVLLTLDDD 820
Score = 173 (66.0 bits), Expect = 1.3e-113, Sum P(2) = 1.3e-113
Identities = 38/146 (26%), Positives = 72/146 (49%)
Query: 99 SEPIFYNFQFDHMTESVLLVVESSDEL-CMTLSVQNISCPVVDLERNVQYRGQWQTVSSK 157
++P ++ ++F +SV++ V S C +S+Q++ CPV DL+ NV + G +QT++ K
Sbjct: 169 AQPQYFKYEFPDGVDSVIVKVTSKKAFPCSVISIQDVLCPVYDLDNNVAFIGMYQTMTKK 228
Query: 158 GGMLLKKSDFPLGLF-IVFVVHSDDYDCSGHKGSFQF---------KRNKAISFSIEKNI 207
+ +++ DFP F +V VV ++D C G + F R K +S + + +
Sbjct: 229 AAITVQRKDFPSNSFYVVVVVKTEDQACGGSLPFYPFVEDEPVDQGHRQKTLSVLVSQAV 288
Query: 208 SDENYXXXXXXXXXXFAGIYVVAFFI 233
+ E Y F Y++ +
Sbjct: 289 TSEAYVGGMLFCLGIFLSFYLLTVLL 314
Score = 169 (64.5 bits), Expect = 7.2e-22, Sum P(2) = 7.2e-22
Identities = 28/37 (75%), Positives = 34/37 (91%)
Query: 262 GIPHHFGFFYSMGMALIMEGVLSACYHVCPSHSNFQF 298
GIP HFG FY+MG AL+MEG+LSACYHVCP+++NFQF
Sbjct: 542 GIPKHFGLFYAMGTALMMEGLLSACYHVCPNYTNFQF 578
Score = 58 (25.5 bits), Expect = 1.8e-101, Sum P(2) = 1.8e-101
Identities = 18/82 (21%), Positives = 33/82 (40%)
Query: 3 LKKSDFPLGLF-IVFVVHSDDYDCSGHKGSFQF---------KRNKAISFSIEKNISDEN 52
+++ DFP F +V VV ++D C G + F R K +S + + ++ E
Sbjct: 233 VQRKDFPSNSFYVVVVVKTEDQACGGSLPFYPFVEDEPVDQGHRQKTLSVLVSQAVTSEA 292
Query: 53 YXXXXXXXXXXFAGIYVVAFFI 74
Y F Y++ +
Sbjct: 293 YVGGMLFCLGIFLSFYLLTVLL 314
>UNIPROTKB|F1PHM1 [details] [associations]
symbol:SIDT2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005765 "lysosomal membrane" evidence=IEA]
[GO:0051033 "RNA transmembrane transporter activity" evidence=IEA]
[GO:0033227 "dsRNA transport" evidence=IEA] [GO:0016246 "RNA
interference" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] InterPro:IPR025958 Pfam:PF13965 GO:GO:0016021
GO:GO:0016246 GO:GO:0005765 GO:GO:0033227 GO:GO:0051033
GeneTree:ENSGT00390000010091 PANTHER:PTHR32543 OMA:RMDDFVL
EMBL:AAEX03003466 Ensembl:ENSCAFT00000020974 Uniprot:F1PHM1
Length = 772
Score = 960 (343.0 bits), Expect = 2.6e-113, Sum P(2) = 2.6e-113
Identities = 181/350 (51%), Positives = 245/350 (70%)
Query: 305 VLNDSGNEDMCYYNYLCSHPFWNLSDINHIFSNIGYVFLGFLFILITVNRE----RASLP 360
V+N +GN+D+CYYN+LC+HP NLS N+I SN+GY+ LG LF+LI + RE RA L
Sbjct: 414 VVNVTGNQDICYYNFLCAHPLGNLSAFNNILSNLGYILLGLLFLLIILQREINHNRALLR 473
Query: 361 NNK---RYGIPHHFGFFYSMGMALIMEGVLSACYHVCPSHSNFQFDTSFMYVIAMLSLLK 417
N+ GIP HFG FY+MG AL+MEG+LSACYHVCP+++NFQFDTSFMY+IA L +LK
Sbjct: 474 NDLYALECGIPKHFGLFYAMGTALMMEGLLSACYHVCPNYTNFQFDTSFMYMIAGLCMLK 533
Query: 418 IYQSRHPDINATAYSTFVALAFVIFVGMVGVL--DETLTFYVIFTVIHVLVCMVLSAQIY 475
+YQ RHPDINA+AYS + LA VIF ++GV+ F+++F++IH++ ++LS Q+Y
Sbjct: 534 LYQKRHPDINASAYSAYACLAIVIFFSVLGVVFGKGNTAFWIVFSIIHIIATLLLSTQLY 593
Query: 476 YMGRWKLDARVFHRVCGVCIADIRSGPRHCCRPMYPSRLVLLIFGNLFNWALAAAQLRYH 535
YMGRWKLD+ + R+ V D R C P+Y R+VLL+ GN+ NW+LAA L
Sbjct: 594 YMGRWKLDSGICRRILHVLYTDCI---RQCSGPLYVDRMVLLVMGNIINWSLAAYGLIMR 650
Query: 536 MVNFGTYFLAVFMVNLCLYLMFYITMKYLSGEKIMAHTGLYLAASILLWTGALYFFFNKS 595
+F +Y LA+ + NL LY FYI MK SGE+I L + + ++W AL+FFF
Sbjct: 651 PNDFASYLLAIGICNLLLYFAFYIIMKLRSGERIKLIPLLCIVCTSVVWGFALFFFFQGL 710
Query: 596 ISWAGTPAESRTYNRPCLVLNFYDHHDVWHVLSALAMFFSFMCLLALDDD 645
+W TPAESR +NR C++L+F+D HD+WH LS++AMF SF+ LL LDDD
Sbjct: 711 STWQKTPAESREHNRDCILLDFFDDHDIWHFLSSIAMFGSFLVLLTLDDD 760
Score = 178 (67.7 bits), Expect = 2.6e-113, Sum P(2) = 2.6e-113
Identities = 39/155 (25%), Positives = 76/155 (49%)
Query: 90 DQRHLMASPSEPIFYNFQFDHMTESVLLVVESSDEL-CMTLSVQNISCPVVDLERNVQYR 148
+Q + ++P ++ ++F +SV++ V S+ C +S+Q++ CPV DL+ NV +
Sbjct: 100 EQFSFNTTAAQPQYFKYEFPEGVDSVIVKVTSNKAFPCSVISIQDVLCPVYDLDNNVAFI 159
Query: 149 GQWQTVSSKGGMLLKKSDFPLGLF-IVFVVHSDDYDCSGHKGSFQF---------KRNKA 198
G +QT++ K + +++ DFP F +V VV ++D C G + F R K
Sbjct: 160 GMYQTMTKKAAITVQRKDFPSNSFYVVVVVKTEDQACGGSLPFYPFVEDEPVDQGHRQKT 219
Query: 199 ISFSIEKNISDENYXXXXXXXXXXFAGIYVVAFFI 233
+S + + ++ E Y F Y++ +
Sbjct: 220 LSVVVSRAVTSEAYVGGMLFCLGIFLSFYLLTILL 254
Score = 169 (64.5 bits), Expect = 1.6e-22, Sum P(2) = 1.6e-22
Identities = 28/37 (75%), Positives = 34/37 (91%)
Query: 262 GIPHHFGFFYSMGMALIMEGVLSACYHVCPSHSNFQF 298
GIP HFG FY+MG AL+MEG+LSACYHVCP+++NFQF
Sbjct: 482 GIPKHFGLFYAMGTALMMEGLLSACYHVCPNYTNFQF 518
Score = 60 (26.2 bits), Expect = 7.5e-101, Sum P(2) = 7.5e-101
Identities = 18/82 (21%), Positives = 33/82 (40%)
Query: 3 LKKSDFPLGLF-IVFVVHSDDYDCSGHKGSFQF---------KRNKAISFSIEKNISDEN 52
+++ DFP F +V VV ++D C G + F R K +S + + ++ E
Sbjct: 173 VQRKDFPSNSFYVVVVVKTEDQACGGSLPFYPFVEDEPVDQGHRQKTLSVVVSRAVTSEA 232
Query: 53 YXXXXXXXXXXFAGIYVVAFFI 74
Y F Y++ +
Sbjct: 233 YVGGMLFCLGIFLSFYLLTILL 254
>UNIPROTKB|J9P974 [details] [associations]
symbol:SIDT2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051033 "RNA transmembrane transporter
activity" evidence=IEA] [GO:0033227 "dsRNA transport" evidence=IEA]
[GO:0016246 "RNA interference" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] InterPro:IPR025958 Pfam:PF13965
GO:GO:0016021 GO:GO:0016246 GO:GO:0033227 GO:GO:0051033
GeneTree:ENSGT00390000010091 PANTHER:PTHR32543 EMBL:AAEX03003466
Ensembl:ENSCAFT00000046796 Uniprot:J9P974
Length = 682
Score = 960 (343.0 bits), Expect = 2.6e-113, Sum P(2) = 2.6e-113
Identities = 181/350 (51%), Positives = 245/350 (70%)
Query: 305 VLNDSGNEDMCYYNYLCSHPFWNLSDINHIFSNIGYVFLGFLFILITVNRE----RASLP 360
V+N +GN+D+CYYN+LC+HP NLS N+I SN+GY+ LG LF+LI + RE RA L
Sbjct: 324 VVNVTGNQDICYYNFLCAHPLGNLSAFNNILSNLGYILLGLLFLLIILQREINHNRALLR 383
Query: 361 NNK---RYGIPHHFGFFYSMGMALIMEGVLSACYHVCPSHSNFQFDTSFMYVIAMLSLLK 417
N+ GIP HFG FY+MG AL+MEG+LSACYHVCP+++NFQFDTSFMY+IA L +LK
Sbjct: 384 NDLYALECGIPKHFGLFYAMGTALMMEGLLSACYHVCPNYTNFQFDTSFMYMIAGLCMLK 443
Query: 418 IYQSRHPDINATAYSTFVALAFVIFVGMVGVL--DETLTFYVIFTVIHVLVCMVLSAQIY 475
+YQ RHPDINA+AYS + LA VIF ++GV+ F+++F++IH++ ++LS Q+Y
Sbjct: 444 LYQKRHPDINASAYSAYACLAIVIFFSVLGVVFGKGNTAFWIVFSIIHIIATLLLSTQLY 503
Query: 476 YMGRWKLDARVFHRVCGVCIADIRSGPRHCCRPMYPSRLVLLIFGNLFNWALAAAQLRYH 535
YMGRWKLD+ + R+ V D R C P+Y R+VLL+ GN+ NW+LAA L
Sbjct: 504 YMGRWKLDSGICRRILHVLYTDCI---RQCSGPLYVDRMVLLVMGNIINWSLAAYGLIMR 560
Query: 536 MVNFGTYFLAVFMVNLCLYLMFYITMKYLSGEKIMAHTGLYLAASILLWTGALYFFFNKS 595
+F +Y LA+ + NL LY FYI MK SGE+I L + + ++W AL+FFF
Sbjct: 561 PNDFASYLLAIGICNLLLYFAFYIIMKLRSGERIKLIPLLCIVCTSVVWGFALFFFFQGL 620
Query: 596 ISWAGTPAESRTYNRPCLVLNFYDHHDVWHVLSALAMFFSFMCLLALDDD 645
+W TPAESR +NR C++L+F+D HD+WH LS++AMF SF+ LL LDDD
Sbjct: 621 STWQKTPAESREHNRDCILLDFFDDHDIWHFLSSIAMFGSFLVLLTLDDD 670
Score = 178 (67.7 bits), Expect = 2.6e-113, Sum P(2) = 2.6e-113
Identities = 39/155 (25%), Positives = 76/155 (49%)
Query: 90 DQRHLMASPSEPIFYNFQFDHMTESVLLVVESSDEL-CMTLSVQNISCPVVDLERNVQYR 148
+Q + ++P ++ ++F +SV++ V S+ C +S+Q++ CPV DL+ NV +
Sbjct: 10 EQFSFNTTAAQPQYFKYEFPEGVDSVIVKVTSNKAFPCSVISIQDVLCPVYDLDNNVAFI 69
Query: 149 GQWQTVSSKGGMLLKKSDFPLGLF-IVFVVHSDDYDCSGHKGSFQF---------KRNKA 198
G +QT++ K + +++ DFP F +V VV ++D C G + F R K
Sbjct: 70 GMYQTMTKKAAITVQRKDFPSNSFYVVVVVKTEDQACGGSLPFYPFVEDEPVDQGHRQKT 129
Query: 199 ISFSIEKNISDENYXXXXXXXXXXFAGIYVVAFFI 233
+S + + ++ E Y F Y++ +
Sbjct: 130 LSVVVSRAVTSEAYVGGMLFCLGIFLSFYLLTILL 164
Score = 169 (64.5 bits), Expect = 1.1e-22, Sum P(2) = 1.1e-22
Identities = 28/37 (75%), Positives = 34/37 (91%)
Query: 262 GIPHHFGFFYSMGMALIMEGVLSACYHVCPSHSNFQF 298
GIP HFG FY+MG AL+MEG+LSACYHVCP+++NFQF
Sbjct: 392 GIPKHFGLFYAMGTALMMEGLLSACYHVCPNYTNFQF 428
Score = 60 (26.2 bits), Expect = 7.5e-101, Sum P(2) = 7.5e-101
Identities = 18/82 (21%), Positives = 33/82 (40%)
Query: 3 LKKSDFPLGLF-IVFVVHSDDYDCSGHKGSFQF---------KRNKAISFSIEKNISDEN 52
+++ DFP F +V VV ++D C G + F R K +S + + ++ E
Sbjct: 83 VQRKDFPSNSFYVVVVVKTEDQACGGSLPFYPFVEDEPVDQGHRQKTLSVVVSRAVTSEA 142
Query: 53 YXXXXXXXXXXFAGIYVVAFFI 74
Y F Y++ +
Sbjct: 143 YVGGMLFCLGIFLSFYLLTILL 164
>UNIPROTKB|E1BB88 [details] [associations]
symbol:SIDT2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005765 "lysosomal membrane" evidence=IEA] [GO:0051033
"RNA transmembrane transporter activity" evidence=IEA] [GO:0033227
"dsRNA transport" evidence=IEA] [GO:0016246 "RNA interference"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR025958 Pfam:PF13965 GO:GO:0016021 GO:GO:0016246
GO:GO:0005765 GO:GO:0033227 GO:GO:0051033
GeneTree:ENSGT00390000010091 PANTHER:PTHR32543 OMA:RMDDFVL
EMBL:DAAA02040390 IPI:IPI00840007 UniGene:Bt.20099
Ensembl:ENSBTAT00000047991 ArrayExpress:E1BB88 Uniprot:E1BB88
Length = 831
Score = 959 (342.6 bits), Expect = 5.5e-113, Sum P(2) = 5.5e-113
Identities = 183/350 (52%), Positives = 244/350 (69%)
Query: 305 VLNDSGNEDMCYYNYLCSHPFWNLSDINHIFSNIGYVFLGFLFILITVNRE----RASLP 360
V+N +GN+D+CYYN+LC+HP NLS N+I SN+GY+ LG LF+LI + RE RA L
Sbjct: 473 VVNVTGNQDICYYNFLCAHPLGNLSAFNNILSNLGYILLGLLFLLIILQREINHNRALLR 532
Query: 361 NNK---RYGIPHHFGFFYSMGMALIMEGVLSACYHVCPSHSNFQFDTSFMYVIAMLSLLK 417
N+ GIP HFG FY+MG AL+MEG+LSACYHVCP+++NFQFDTSFMY+IA L +LK
Sbjct: 533 NDLCALECGIPKHFGLFYAMGTALMMEGLLSACYHVCPNYTNFQFDTSFMYMIAGLCMLK 592
Query: 418 IYQSRHPDINATAYSTFVALAFVIFVGMVGVL--DETLTFYVIFTVIHVLVCMVLSAQIY 475
+YQ RHPDINA+AYS + LA VIF ++GV+ F++IF+VIH+ ++LS Q+Y
Sbjct: 593 LYQKRHPDINASAYSAYACLAIVIFFSVLGVVFGKGNTAFWIIFSVIHITATLLLSTQLY 652
Query: 476 YMGRWKLDARVFHRVCGVCIADIRSGPRHCCRPMYPSRLVLLIFGNLFNWALAAAQLRYH 535
YMGRWKLD+ + R+ V D R C P+Y R+VLL+ GN+ NW+LAA L
Sbjct: 653 YMGRWKLDSGICRRILHVLYTDCI---RQCSGPLYVDRMVLLVMGNIINWSLAAYGLIMR 709
Query: 536 MVNFGTYFLAVFMVNLCLYLMFYITMKYLSGEKIMAHTGLYLAASILLWTGALYFFFNKS 595
+F +Y LA+ + NL LY FYI MK SGE+I L + + ++W AL+FFF
Sbjct: 710 PNDFASYLLAIGICNLLLYFAFYIIMKLRSGERIKLIPLLCIVCTSVVWGFALFFFFQGL 769
Query: 596 ISWAGTPAESRTYNRPCLVLNFYDHHDVWHVLSALAMFFSFMCLLALDDD 645
+W TPAESR +NR C++L+F+D HD+WH LS++AMF SF+ LL LDDD
Sbjct: 770 STWQKTPAESREHNRDCILLDFFDDHDIWHFLSSIAMFGSFLVLLTLDDD 819
Score = 176 (67.0 bits), Expect = 5.5e-113, Sum P(2) = 5.5e-113
Identities = 38/146 (26%), Positives = 73/146 (50%)
Query: 99 SEPIFYNFQFDHMTESVLLVVESSDEL-CMTLSVQNISCPVVDLERNVQYRGQWQTVSSK 157
++P ++ ++F +SV++ V S+ C +S+Q++ CPV DL+ NV + G +QT++ K
Sbjct: 169 AQPQYFKYEFPEGVDSVIVKVASNTAFPCSVISIQDVLCPVYDLDNNVAFIGMYQTMTKK 228
Query: 158 GGMLLKKSDFPLGLF-IVFVVHSDDYDCSGHKGSFQF---------KRNKAISFSIEKNI 207
+ +++ DFP F +V VV ++D C G + F R K +S + + +
Sbjct: 229 AAITVQRKDFPSNSFYVVVVVKTEDQACGGSLPFYPFIEDEPVDQGHRQKTLSVLVSRAV 288
Query: 208 SDENYXXXXXXXXXXFAGIYVVAFFI 233
+ E Y F Y++ +
Sbjct: 289 TSEAYVGGMLFCLGIFLSFYLLTVLL 314
Score = 169 (64.5 bits), Expect = 3.4e-22, Sum P(2) = 3.4e-22
Identities = 28/37 (75%), Positives = 34/37 (91%)
Query: 262 GIPHHFGFFYSMGMALIMEGVLSACYHVCPSHSNFQF 298
GIP HFG FY+MG AL+MEG+LSACYHVCP+++NFQF
Sbjct: 541 GIPKHFGLFYAMGTALMMEGLLSACYHVCPNYTNFQF 577
Score = 59 (25.8 bits), Expect = 1.2e-100, Sum P(2) = 1.2e-100
Identities = 18/82 (21%), Positives = 33/82 (40%)
Query: 3 LKKSDFPLGLF-IVFVVHSDDYDCSGHKGSFQF---------KRNKAISFSIEKNISDEN 52
+++ DFP F +V VV ++D C G + F R K +S + + ++ E
Sbjct: 233 VQRKDFPSNSFYVVVVVKTEDQACGGSLPFYPFIEDEPVDQGHRQKTLSVLVSRAVTSEA 292
Query: 53 YXXXXXXXXXXFAGIYVVAFFI 74
Y F Y++ +
Sbjct: 293 YVGGMLFCLGIFLSFYLLTVLL 314
>UNIPROTKB|F1SJS6 [details] [associations]
symbol:SIDT2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005765 "lysosomal membrane" evidence=IEA] [GO:0051033
"RNA transmembrane transporter activity" evidence=IEA] [GO:0033227
"dsRNA transport" evidence=IEA] [GO:0016246 "RNA interference"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR025958 Pfam:PF13965 GO:GO:0016021 GO:GO:0016246
GO:GO:0005765 GO:GO:0033227 GO:GO:0051033
GeneTree:ENSGT00390000010091 PANTHER:PTHR32543 OMA:RMDDFVL
EMBL:CU633260 Ensembl:ENSSSCT00000016440 Uniprot:F1SJS6
Length = 832
Score = 954 (340.9 bits), Expect = 5.5e-113, Sum P(2) = 5.5e-113
Identities = 180/350 (51%), Positives = 244/350 (69%)
Query: 305 VLNDSGNEDMCYYNYLCSHPFWNLSDINHIFSNIGYVFLGFLFILITVNRE----RASLP 360
V+N +GN+D+CYYN+LC+HP NLS N+I SN+GY+ LG LF+ I + RE RA L
Sbjct: 474 VVNVTGNQDICYYNFLCAHPLGNLSAFNNILSNLGYILLGLLFLFIILQREINHNRALLR 533
Query: 361 NNK---RYGIPHHFGFFYSMGMALIMEGVLSACYHVCPSHSNFQFDTSFMYVIAMLSLLK 417
N+ GIP HFG FY+MG AL+MEG+LSACYHVCP+++NFQFDTSFMY+IA L +LK
Sbjct: 534 NDLYALECGIPKHFGLFYAMGTALMMEGLLSACYHVCPNYTNFQFDTSFMYMIAGLCMLK 593
Query: 418 IYQSRHPDINATAYSTFVALAFVIFVGMVGVL--DETLTFYVIFTVIHVLVCMVLSAQIY 475
+YQ RHPDINA+AYS + LA VIF ++GV+ F+++F++IH++ ++LS Q+Y
Sbjct: 594 LYQKRHPDINASAYSAYACLAIVIFFSVLGVVFGKGNTAFWIVFSIIHIISTLLLSTQLY 653
Query: 476 YMGRWKLDARVFHRVCGVCIADIRSGPRHCCRPMYPSRLVLLIFGNLFNWALAAAQLRYH 535
YMGRWKLD+ + R+ V D R C P+Y R+VLL+ GN+ NW+LAA L
Sbjct: 654 YMGRWKLDSGICRRILHVLYTDCI---RQCSGPLYVDRMVLLVMGNIINWSLAAYGLIMR 710
Query: 536 MVNFGTYFLAVFMVNLCLYLMFYITMKYLSGEKIMAHTGLYLAASILLWTGALYFFFNKS 595
+F +Y LA+ + NL LY FYI MK SGE+I L + + ++W AL+FFF
Sbjct: 711 PNDFASYLLAIGICNLLLYFAFYIIMKLRSGERIKLIPLLCIVCTSVVWGFALFFFFQGL 770
Query: 596 ISWAGTPAESRTYNRPCLVLNFYDHHDVWHVLSALAMFFSFMCLLALDDD 645
+W TPAESR +NR C++L+F+D HD+WH LS++AMF SF+ LL LDDD
Sbjct: 771 STWQKTPAESREHNRDCILLDFFDDHDIWHFLSSIAMFGSFLVLLTLDDD 820
Score = 181 (68.8 bits), Expect = 5.5e-113, Sum P(2) = 5.5e-113
Identities = 40/155 (25%), Positives = 76/155 (49%)
Query: 90 DQRHLMASPSEPIFYNFQFDHMTESVLLVVESSDEL-CMTLSVQNISCPVVDLERNVQYR 148
+Q + ++P ++ ++F +SV++ V S+ C +S+Q++ CPV DL+ NV +
Sbjct: 160 EQFSFNTTAAQPQYFKYEFPEGVDSVIVKVTSNKAFPCSVISIQDVLCPVYDLDNNVAFI 219
Query: 149 GQWQTVSSKGGMLLKKSDFPLGLF-IVFVVHSDDYDCSGHKGSFQF---------KRNKA 198
G +QT++ K + +++ DFP F +V VV ++D C G + F R K
Sbjct: 220 GMYQTMTKKAAITVQRKDFPSNSFYVVVVVKTEDQACGGSLPFYPFVEDEPVDQGHRQKT 279
Query: 199 ISFSIEKNISDENYXXXXXXXXXXFAGIYVVAFFI 233
+S + K ++ E Y F Y++ +
Sbjct: 280 LSVLVSKAVTSEAYVGGVLFCLGIFLSFYLLTILL 314
Score = 169 (64.5 bits), Expect = 9.6e-23, Sum P(2) = 9.6e-23
Identities = 28/37 (75%), Positives = 34/37 (91%)
Query: 262 GIPHHFGFFYSMGMALIMEGVLSACYHVCPSHSNFQF 298
GIP HFG FY+MG AL+MEG+LSACYHVCP+++NFQF
Sbjct: 542 GIPKHFGLFYAMGTALMMEGLLSACYHVCPNYTNFQF 578
Score = 63 (27.2 bits), Expect = 1.6e-100, Sum P(2) = 1.6e-100
Identities = 19/82 (23%), Positives = 33/82 (40%)
Query: 3 LKKSDFPLGLF-IVFVVHSDDYDCSGHKGSFQF---------KRNKAISFSIEKNISDEN 52
+++ DFP F +V VV ++D C G + F R K +S + K ++ E
Sbjct: 233 VQRKDFPSNSFYVVVVVKTEDQACGGSLPFYPFVEDEPVDQGHRQKTLSVLVSKAVTSEA 292
Query: 53 YXXXXXXXXXXFAGIYVVAFFI 74
Y F Y++ +
Sbjct: 293 YVGGVLFCLGIFLSFYLLTILL 314
>UNIPROTKB|C9JBG5 [details] [associations]
symbol:SIDT2 "SID1 transmembrane family member 2"
species:9606 "Homo sapiens" [GO:0016246 "RNA interference"
evidence=IEA] [GO:0033227 "dsRNA transport" evidence=IEA]
[GO:0051033 "RNA transmembrane transporter activity" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR025958
Pfam:PF13965 GO:GO:0016021 GO:GO:0016246 EMBL:CH471065
GO:GO:0033227 EMBL:AP005018 GO:GO:0051033 HOGENOM:HOG000020635
PANTHER:PTHR32543 IPI:IPI00953391 UniGene:Hs.712144 HGNC:HGNC:24272
ChiTaRS:SIDT2 OMA:RMDDFVL OrthoDB:EOG42FSH1 STRING:C9JBG5
Ensembl:ENST00000278951 UCSC:uc001pqg.2 Uniprot:C9JBG5
Length = 855
Score = 938 (335.3 bits), Expect = 7.1e-111, Sum P(2) = 7.1e-111
Identities = 176/342 (51%), Positives = 240/342 (70%)
Query: 305 VLNDSGNEDMCYYNYLCSHPFWNLSDINHIFSNIGYVFLGFLFILITVNRE----RASLP 360
V+N +GN+D+CYYN+LC+HP NLS N+I SN+GY+ LG LF+LI + RE RA L
Sbjct: 495 VVNVTGNQDICYYNFLCAHPLGNLSAFNNILSNLGYILLGLLFLLIILQREINHNRALLR 554
Query: 361 NNK---RYGIPHHFGFFYSMGMALIMEGVLSACYHVCPSHSNFQFDTSFMYVIAMLSLLK 417
N+ GIP HFG FY+MG AL+MEG+LSACYHVCP+++NFQFDTSFMY+IA L +LK
Sbjct: 555 NDLCALECGIPKHFGLFYAMGTALMMEGLLSACYHVCPNYTNFQFDTSFMYMIAGLCMLK 614
Query: 418 IYQSRHPDINATAYSTFVALAFVIFVGMVGVL--DETLTFYVIFTVIHVLVCMVLSAQIY 475
+YQ RHPDINA+AYS + LA VIF ++GV+ F+++F++IH++ ++LS Q+Y
Sbjct: 615 LYQKRHPDINASAYSAYACLAIVIFFSVLGVVFGKGNTAFWIVFSIIHIIATLLLSTQLY 674
Query: 476 YMGRWKLDARVFHRVCGVCIADIRSGPRHCCRPMYPSRLVLLIFGNLFNWALAAAQLRYH 535
YMGRWKLD+ +F R+ V D R C P+Y R+VLL+ GN+ NW+LAA L
Sbjct: 675 YMGRWKLDSGIFRRILHVLYTDCI---RQCSGPLYVDRMVLLVMGNVINWSLAAYGLIMR 731
Query: 536 MVNFGTYFLAVFMVNLCLYLMFYITMKYLSGEKIMAHTGLYLAASILLWTGALYFFFNKS 595
+F +Y LA+ + NL LY FYI MK SGE+I L + + ++W AL+FFF
Sbjct: 732 PNDFASYLLAIGICNLLLYFAFYIIMKLRSGERIKLIPLLCIVCTSVVWGFALFFFFQGL 791
Query: 596 ISWAGTPAESRTYNRPCLVLNFYDHHDVWHVLSALAMFFSFM 637
+W TPAESR +NR C++L+F+D HD+WH LS++AMF SF+
Sbjct: 792 STWQKTPAESREHNRDCILLDFFDDHDIWHFLSSIAMFGSFL 833
Score = 177 (67.4 bits), Expect = 7.1e-111, Sum P(2) = 7.1e-111
Identities = 39/155 (25%), Positives = 76/155 (49%)
Query: 90 DQRHLMASPSEPIFYNFQFDHMTESVLLVVESSDEL-CMTLSVQNISCPVVDLERNVQYR 148
+Q + ++P ++ ++F +SV++ V S+ C +S+Q++ CPV DL+ NV +
Sbjct: 160 EQFSFNTTAAQPQYFKYEFPEGVDSVIVKVTSNKAFPCSVISIQDVLCPVYDLDNNVAFI 219
Query: 149 GQWQTVSSKGGMLLKKSDFPLGLF-IVFVVHSDDYDCSGHKGSFQFK---------RNKA 198
G +QT++ K + +++ DFP F +V VV ++D C G + F R K
Sbjct: 220 GMYQTMTKKAAITVQRKDFPSNSFYVVVVVKTEDQACGGSLPFYPFAEDEPVDQGHRQKT 279
Query: 199 ISFSIEKNISDENYXXXXXXXXXXFAGIYVVAFFI 233
+S + + ++ E Y F Y++ +
Sbjct: 280 LSVLVSQAVTSEAYVSGMLFCLGIFLSFYLLTVLL 314
Score = 169 (64.5 bits), Expect = 2.8e-22, Sum P(2) = 2.8e-22
Identities = 28/37 (75%), Positives = 34/37 (91%)
Query: 262 GIPHHFGFFYSMGMALIMEGVLSACYHVCPSHSNFQF 298
GIP HFG FY+MG AL+MEG+LSACYHVCP+++NFQF
Sbjct: 563 GIPKHFGLFYAMGTALMMEGLLSACYHVCPNYTNFQF 599
Score = 59 (25.8 bits), Expect = 2.0e-98, Sum P(2) = 2.0e-98
Identities = 18/82 (21%), Positives = 33/82 (40%)
Query: 3 LKKSDFPLGLF-IVFVVHSDDYDCSGHKGSFQFK---------RNKAISFSIEKNISDEN 52
+++ DFP F +V VV ++D C G + F R K +S + + ++ E
Sbjct: 233 VQRKDFPSNSFYVVVVVKTEDQACGGSLPFYPFAEDEPVDQGHRQKTLSVLVSQAVTSEA 292
Query: 53 YXXXXXXXXXXFAGIYVVAFFI 74
Y F Y++ +
Sbjct: 293 YVSGMLFCLGIFLSFYLLTVLL 314
>UNIPROTKB|F1NJG0 [details] [associations]
symbol:F1NJG0 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016246 "RNA interference" evidence=IEA] [GO:0033227 "dsRNA
transport" evidence=IEA] [GO:0051033 "RNA transmembrane transporter
activity" evidence=IEA] InterPro:IPR025958 Pfam:PF13965
GO:GO:0016021 GO:GO:0016246 GO:GO:0033227 GO:GO:0051033
GeneTree:ENSGT00390000010091 PANTHER:PTHR32543 OMA:RMDDFVL
EMBL:AADN02058072 EMBL:AADN02058073 IPI:IPI00596670
Ensembl:ENSGALT00000019416 Uniprot:F1NJG0
Length = 788
Score = 887 (317.3 bits), Expect = 3.5e-105, Sum P(2) = 3.5e-105
Identities = 173/337 (51%), Positives = 230/337 (68%)
Query: 320 LC--SHPFWNLSDINHIFSNIGYVFLGFLFILITVNRE----RASLPNNKRY---GIPHH 370
LC SHP +S N+I SN+GYV LG LF+LI + RE RA + N+ GIP H
Sbjct: 443 LCAPSHPGGEVSAFNNIISNLGYVLLGLLFLLIILQREINYNRALMRNDSHALECGIPKH 502
Query: 371 FGFFYSMGMALIMEGVLSACYHVCPSHSNFQFDTSFMYVIAMLSLLKIYQSRHPDINATA 430
FG FY+MG AL+MEG+LSACYHVCP+++NFQFDTSFMY+IA L +LK+YQ RHPDINA+A
Sbjct: 503 FGLFYAMGTALMMEGLLSACYHVCPNYTNFQFDTSFMYMIAGLCMLKLYQKRHPDINASA 562
Query: 431 YSTFVALAFVIFVGMVGVL--DETLTFYVIFTVIHVLVCMVLSAQIYYMGRWKLDARVFH 488
YS + LA VIF ++GV+ + F++IF+V+H++ ++LS Q+YYMGRWKLD +
Sbjct: 563 YSAYACLAVVIFFSVIGVVFGKGNMVFWIIFSVMHIMATLLLSTQLYYMGRWKLDTGILR 622
Query: 489 RVCGVCIADIRSGPRHCCRPMYPSRLVLLIFGNLFNWALAAAQLRYHMVNFGTYFLAVFM 548
R+ V D R C PMY R+VLL+ GN+ NW+LAA L +F +Y LA+ +
Sbjct: 623 RILHVMYTDC---VRQCSGPMYVDRMVLLVMGNIINWSLAAYGLLVRPNDFASYLLAIGI 679
Query: 549 VNLCLYLMFYITMKYLSGEKIMAHTGLYLAASILLWTGALYFFFNKSISWAGTPAESRTY 608
NL LY FYI MK SGE+I L + + ++W AL+FFF +W TPAESR +
Sbjct: 680 CNLLLYFAFYIIMKLRSGERIKLIPLLCIIGTSVVWGFALFFFFQGLSTWQKTPAESREH 739
Query: 609 NRPCLVLNFYDHHDVWHVLSALAMFFSFMCLLALDDD 645
NR C++L+F+D HD+WH LS++AMF SF+ LL LDDD
Sbjct: 740 NRDCILLDFFDDHDIWHFLSSIAMFGSFLVLLTLDDD 776
Score = 174 (66.3 bits), Expect = 3.5e-105, Sum P(2) = 3.5e-105
Identities = 45/161 (27%), Positives = 75/161 (46%)
Query: 96 ASPSEPIFYNFQFDHMTESVLLVVESSDEL-CMTLSVQNISCPVVDLERNVQYRGQWQTV 154
A+ S+P ++ ++F +SV++ V S+ C +S+Q+I CPV DL+ NV + G +QT+
Sbjct: 110 ATASQPQYFKYEFPDGVDSVIVKVTSAMAFPCSVISIQDILCPVYDLDNNVAFIGMYQTM 169
Query: 155 SSKGGMLLKKSDFPLGLF-IVFVVHSDDYDCSGHKGSF-------------QFKRNKAIS 200
+ K + +++ DFP F +V VV ++D C G + Q R K +
Sbjct: 170 TKKAAITVQRKDFPSNSFYVVVVVKTEDEVCGGALPYYPLSKRTSPDEPVDQHNRQKMLE 229
Query: 201 FSIEKNISDENYXXXXXXXXXXFAGIYVVAFFIGIKCIRCC 241
+ I+ E Y F YV+ I C C
Sbjct: 230 VMVSPAITSEAYVSSMLFCLGIFLSFYVITVLIA--CWENC 268
Score = 169 (64.5 bits), Expect = 4.8e-22, Sum P(2) = 4.8e-22
Identities = 28/37 (75%), Positives = 34/37 (91%)
Query: 262 GIPHHFGFFYSMGMALIMEGVLSACYHVCPSHSNFQF 298
GIP HFG FY+MG AL+MEG+LSACYHVCP+++NFQF
Sbjct: 498 GIPKHFGLFYAMGTALMMEGLLSACYHVCPNYTNFQF 534
Score = 52 (23.4 bits), Expect = 2.7e-92, Sum P(2) = 2.7e-92
Identities = 22/94 (23%), Positives = 33/94 (35%)
Query: 3 LKKSDFPLGLF-IVFVVHSDDYDCSGHKGSF-------------QFKRNKAISFSIEKNI 48
+++ DFP F +V VV ++D C G + Q R K + + I
Sbjct: 177 VQRKDFPSNSFYVVVVVKTEDEVCGGALPYYPLSKRTSPDEPVDQHNRQKMLEVMVSPAI 236
Query: 49 SDENYXXXXXXXXXXFAGIYVVAFFIGIKCIRCC 82
+ E Y F YV+ I C C
Sbjct: 237 TSEAYVSSMLFCLGIFLSFYVITVLIA--CWENC 268
>UNIPROTKB|D4A117 [details] [associations]
symbol:Sidt1 "SID1 transmembrane family member 1"
species:10116 "Rattus norvegicus" [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016246 "RNA interference"
evidence=IEA] [GO:0033227 "dsRNA transport" evidence=IEA]
[GO:0051033 "RNA transmembrane transporter activity" evidence=IEA]
InterPro:IPR025958 Pfam:PF13965 RGD:1559616 GO:GO:0016021
GO:GO:0016246 GO:GO:0033227 GO:GO:0051033 EMBL:CH473967
GeneTree:ENSGT00390000010091 PANTHER:PTHR32543 UniGene:Rn.51246
IPI:IPI00949518 Ensembl:ENSRNOT00000002759 Uniprot:D4A117
Length = 445
Score = 976 (348.6 bits), Expect = 2.8e-98, P = 2.8e-98
Identities = 187/350 (53%), Positives = 244/350 (69%)
Query: 305 VLNDSGNEDMCYYNYLCSHPFWNLSDINHIFSNIGYVFLGFLFILITVNRE---RASLPN 361
V+N +GN+D+CYYN+LC+HP LS N+I SN+G+V LGFLF+LI + R+ R +L
Sbjct: 87 VVNVTGNQDICYYNFLCAHPLGVLSAFNNILSNLGHVLLGFLFLLIVLRRDLLHRRALEA 146
Query: 362 NK----RYGIPHHFGFFYSMGMALIMEGVLSACYHVCPSHSNFQFDTSFMYVIAMLSLLK 417
YGIP HFG FY+MG+AL+MEGVLSACYHVCP++SNFQFDTSFMY+IA L +LK
Sbjct: 147 KDIFAMEYGIPKHFGLFYAMGIALMMEGVLSACYHVCPNYSNFQFDTSFMYMIAGLCMLK 206
Query: 418 IYQSRHPDINATAYSTFVALAFVIFVGMVGVL--DETLTFYVIFTVIHVLVCMVLSAQIY 475
+YQ+RHPDINA+AYS + + A VI + ++GV+ + F++IF+ IHVL + LS QIY
Sbjct: 207 LYQTRHPDINASAYSAYASFAVVITLTVLGVVFGKNDVWFWIIFSAIHVLASLALSTQIY 266
Query: 476 YMGRWKLDARVFHRVCGVCIADIRSGPRHCCRPMYPSRLVLLIFGNLFNWALAAAQLRYH 535
YMGR+K+D +F R V D + C RP+Y R+VLLI GNL NW+ A L Y
Sbjct: 267 YMGRFKIDLGIFRRAAMVFYTDCI---QQCSRPLYMDRMVLLIVGNLVNWSFALFGLIYR 323
Query: 536 MVNFGTYFLAVFMVNLCLYLMFYITMKYLSGEKIMAHTGLYLAASILLWTGALYFFFNKS 595
+F +Y L +F+ NL LYL FYI MK S EK++ + A+ ++W ALYFFF
Sbjct: 324 PRDFASYMLGIFICNLLLYLAFYIIMKLRSSEKVLPLPVFCIVATAVVWAAALYFFFQNL 383
Query: 596 ISWAGTPAESRTYNRPCLVLNFYDHHDVWHVLSALAMFFSFMCLLALDDD 645
SW GTPAESR NR C++L F+D HD+WH LSA A+FFSF+ LL LDDD
Sbjct: 384 SSWEGTPAESREKNRECVLLGFFDDHDIWHFLSATALFFSFLVLLTLDDD 433
Score = 184 (69.8 bits), Expect = 5.3e-11, P = 5.3e-11
Identities = 31/38 (81%), Positives = 36/38 (94%)
Query: 261 YGIPHHFGFFYSMGMALIMEGVLSACYHVCPSHSNFQF 298
YGIP HFG FY+MG+AL+MEGVLSACYHVCP++SNFQF
Sbjct: 154 YGIPKHFGLFYAMGIALMMEGVLSACYHVCPNYSNFQF 191
>UNIPROTKB|F1NZ63 [details] [associations]
symbol:F1NZ63 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016246 "RNA interference" evidence=IEA] [GO:0033227 "dsRNA
transport" evidence=IEA] [GO:0051033 "RNA transmembrane transporter
activity" evidence=IEA] InterPro:IPR025958 Pfam:PF13965
GO:GO:0016021 GO:GO:0016246 GO:GO:0033227 GO:GO:0051033
GeneTree:ENSGT00390000010091 PANTHER:PTHR32543 OMA:FWKILLI
EMBL:AADN02004985 IPI:IPI00598909 Ensembl:ENSGALT00000027759
Uniprot:F1NZ63
Length = 448
Score = 833 (298.3 bits), Expect = 3.9e-83, P = 3.9e-83
Identities = 165/332 (49%), Positives = 222/332 (66%)
Query: 305 VLNDSGNEDMCYYNYLCSHPFWNLSDINHIFSNIGYVFLGFLFILITVNRE----RASLP 360
V+N +GN+ +CYYN+LC+HP NLS N+I SN+GYV LG LF+LI + RE RA +
Sbjct: 86 VVNVTGNQAICYYNFLCAHPLGNLSAFNNIISNLGYVLLGLLFLLIILQREINYNRALMC 145
Query: 361 NNKRY---GIPHHFGFFYSMGMALIMEGVLSACYHVCPSHSNFQFDTSFMYVIAMLSLLK 417
N+ GIP HFG FY+MG AL+MEG+LSAC HVCP+++NFQFDTSFMY+IA L +LK
Sbjct: 146 NDSHALECGIPKHFGLFYAMGTALMMEGLLSACCHVCPNYTNFQFDTSFMYMIAGLCMLK 205
Query: 418 IYQSRHPDINATAYSTFVALAFVIFVGMVGVL--DETLTFYVIFTVIHVLVCMVLSAQIY 475
+YQ RH DI A+AYS + LA VIF ++GV+ + F++IF+V+H++ ++LS Q+Y
Sbjct: 206 LYQKRHLDI-ASAYSAYACLAVVIFFSVIGVVFGKGNMVFWIIFSVMHIMATLLLSTQLY 264
Query: 476 YMGRWKLDARVFHRVCGVCIADIRSGPRHCCRPMYPSRLVLLIFGNLFNWALAAAQLRYH 535
YMG WKLD + R+ V D R C PMY R+VLL+ GN+ NW+LAA L H
Sbjct: 265 YMGHWKLDTGILCRILHVMYTDC---VRQCSGPMYVDRMVLLVMGNIINWSLAAYGLLIH 321
Query: 536 MVNFGTYFLAVFMVNLCLYLMFYITMKYLSGEKIMAHTGLYLAASILLWTGALYFFFNKS 595
+F +Y LA+ + NL LY FYI MK SGE I L + ++W AL+FFF
Sbjct: 322 PNDFASYLLAIGICNLLLYFAFYIVMKLHSGECIKLIPVLCTIGTSVVWGFALFFFFQGL 381
Query: 596 ISWAGTPAESRTYNRPCLVLNFYDHHDVWHVL 627
+W T AESR +NR C++LNF+D HD ++L
Sbjct: 382 SAWQKTTAESREHNRDCILLNFFDDHDKCNLL 413
Score = 160 (61.4 bits), Expect = 2.4e-08, P = 2.4e-08
Identities = 27/37 (72%), Positives = 33/37 (89%)
Query: 262 GIPHHFGFFYSMGMALIMEGVLSACYHVCPSHSNFQF 298
GIP HFG FY+MG AL+MEG+LSAC HVCP+++NFQF
Sbjct: 154 GIPKHFGLFYAMGTALMMEGLLSACCHVCPNYTNFQF 190
>WB|WBGene00006477 [details] [associations]
symbol:chup-1 species:6239 "Caenorhabditis elegans"
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0016246 "RNA
interference" evidence=IEA] [GO:0033227 "dsRNA transport"
evidence=IEA] [GO:0051033 "RNA transmembrane transporter activity"
evidence=IEA] [GO:0005768 "endosome" evidence=IDA] [GO:0031410
"cytoplasmic vesicle" evidence=IDA] [GO:0005764 "lysosome"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0015485 "cholesterol binding" evidence=IDA] [GO:0070508
"cholesterol import" evidence=IMP] [GO:0005794 "Golgi apparatus"
evidence=IDA] InterPro:IPR025958 Pfam:PF13965 GO:GO:0016021
GO:GO:0016246 GO:GO:0033227 GO:GO:0051033
GeneTree:ENSGT00390000010091 HOGENOM:HOG000020635 PANTHER:PTHR32543
EMBL:FO081647 GeneID:181125 KEGG:cel:CELE_ZK721.1 CTD:181125
PIR:T28870 RefSeq:NP_509489.1 ProteinModelPortal:Q9GYF0
EnsemblMetazoa:ZK721.1a WormBase:ZK721.1a OMA:CMTVSVQ
NextBio:912512 ArrayExpress:Q9GYF0 Uniprot:Q9GYF0
Length = 756
Score = 667 (239.9 bits), Expect = 1.2e-81, Sum P(2) = 1.2e-81
Identities = 134/354 (37%), Positives = 206/354 (58%)
Query: 306 LNDSGNEDMCYYNYLCSHPFWNLSDINHIFSNIGYVFLGFLFILITVNRER------ASL 359
L SG+ D C +N+ C+ P W N++ SN GYV+ G L I++ RER A
Sbjct: 400 LRQSGDLDECTFNFQCARPLWYFVAFNNVVSNGGYVYFGTLIIVMNYCRERSFRRLFAVQ 459
Query: 360 PN-NKRYGIPHHFGFFYSMGMALIMEGVLSACYHVCPSHSNFQFDTSFMYVIAMLSLLKI 418
P +RYG+P H G ++G+A+IMEG+ SA YHVCP++ N+QFDT+ MYVI ML LKI
Sbjct: 460 PTLAERYGLPQHSGLMTAIGLAVIMEGISSATYHVCPNNINYQFDTALMYVIGMLGKLKI 519
Query: 419 YQSRHPDINATAYSTFVALAFVIFVGMVGVLDETLTFYVIFTVIHVLVCMVLSAQIYYMG 478
+ RHPD+ +AY F L + + GV + F+ +F++I++ +++S + Y+ G
Sbjct: 520 WSLRHPDMVVSAYHAFGFLGVFLMAAIAGVYVHNMIFWALFSIIYIASMLLVSLEFYFKG 579
Query: 479 RWKLDARVFHRVCGVCIADIRSGPRHCCRPMYPSRLVLLIFGNLFNWALAAAQLRYHMVN 538
W L+ R + ++ + S C P Y +R +++ N+ N A+ L H +
Sbjct: 580 IWTLNLRELRN--SIRLSWVSSRHLSCVVPAYKARFFVILLLNIANTAVVVYGLEAHPKD 637
Query: 539 FGTYFLAVFMVNLCLYLMFYITMKYLSGEKIMAHTGLYLAASILLWTGALYFFFNKSIS- 597
F ++ L F+ NL +Y+++YI MK + EKI L A+++ WT A FN+ +S
Sbjct: 638 FLSFLLIPFIGNLFIYIIYYILMKMIYREKIPKRAIALLFAAVISWTCA-GILFNQRVSD 696
Query: 598 WAGTPAESRTYNRPCLVLNFYDHHDVWHVLSALAMFFSFMCLLALDDDGTYFFR 651
W+ PA SR N+PC+ LNFYD+HD+WH+ SA A+FFSF + +DDD + R
Sbjct: 697 WSKMPAISRELNKPCIFLNFYDNHDLWHLSSAFAIFFSFTAINVIDDDLMFVMR 750
Score = 171 (65.3 bits), Expect = 1.2e-81, Sum P(2) = 1.2e-81
Identities = 41/121 (33%), Positives = 68/121 (56%)
Query: 84 SMYMLSD-QRHLMASPSEPIFYNFQFDHMTESVLLVVESSDELCMTLSVQNISCPVVDLE 142
+ Y+ ++ QR + AS SEP++ + +SV + ++S+ +CMT+SVQ I CPV DL
Sbjct: 135 NFYLYNNSQRLVTASASEPVYLRYDIPGDVDSVAVHLDSNSTICMTVSVQKIGCPVFDLP 194
Query: 143 RNVQYRGQWQTVSSKGGMLLKKSDFPLGLFIVFVVHSDDYDCSGHKGSFQFKRNKAISFS 202
NV G QT+++ + ++KS ++VFVV+++D CS K NK F
Sbjct: 195 DNVNSMGLHQTMTTSATIPVEKSRMS-SFYVVFVVNTNDDLCSE---ILSIKPNKPTKFP 250
Query: 203 I 203
+
Sbjct: 251 L 251
Score = 141 (54.7 bits), Expect = 7.6e-19, Sum P(2) = 7.6e-19
Identities = 34/91 (37%), Positives = 50/91 (54%)
Query: 253 LSPEEPTRYGIPHHFGFFYSMGMALIMEGVLSACYHVCPSHSNFQFGSRKPKVLNDSGNE 312
+ P RYG+P H G ++G+A+IMEG+ SA YHVCP++ N+QF + V+ G
Sbjct: 458 VQPTLAERYGLPQHSGLMTAIGLAVIMEGISSATYHVCPNNINYQFDTALMYVIGMLGKL 517
Query: 313 DMCYYNYLCSHPFWNLSDINHIFSNIGYVFL 343
+ + HP +S H F +G VFL
Sbjct: 518 KI----WSLRHPDMVVSAY-HAFGFLG-VFL 542
Score = 41 (19.5 bits), Expect = 6.0e-68, Sum P(2) = 6.0e-68
Identities = 11/32 (34%), Positives = 17/32 (53%)
Query: 13 FIVFVVHSDDYDCSGHKGSFQFKRNKAISFSI 44
++VFVV+++D CS K NK F +
Sbjct: 223 YVVFVVNTNDDLCSE---ILSIKPNKPTKFPL 251
Score = 39 (18.8 bits), Expect = 2.8e-08, Sum P(2) = 2.8e-08
Identities = 10/34 (29%), Positives = 18/34 (52%)
Query: 448 VLDETLTFYVIFTVIHVLVCMVLSAQIYYMGRWK 481
+ D T+ V + I +LV +V+ Y+ G W+
Sbjct: 266 IFDYTIPI-VFWACILLLVTIVVFVYHYFDGIWE 298
Score = 37 (18.1 bits), Expect = 1.6e-67, Sum P(2) = 1.6e-67
Identities = 8/27 (29%), Positives = 14/27 (51%)
Query: 82 CP-SMYMLSDQRHLMASPSEPIFYNFQ 107
CP + Y + + + S P+ YNF+
Sbjct: 103 CPFTEYKEGEAFTVEVTSSRPVHYNFR 129
>UNIPROTKB|G3N0V5 [details] [associations]
symbol:G3N0V5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051033 "RNA transmembrane transporter activity"
evidence=IEA] [GO:0033227 "dsRNA transport" evidence=IEA]
[GO:0016246 "RNA interference" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] InterPro:IPR025958 Pfam:PF13965
GO:GO:0016021 GO:GO:0016246 GO:GO:0033227 GO:GO:0051033
GeneTree:ENSGT00390000010091 PANTHER:PTHR32543 EMBL:DAAA02001398
EMBL:DAAA02001397 Ensembl:ENSBTAT00000065266 Uniprot:G3N0V5
Length = 318
Score = 656 (236.0 bits), Expect = 2.3e-64, P = 2.3e-64
Identities = 137/294 (46%), Positives = 182/294 (61%)
Query: 360 PNNKRYGIPHHFGFFYSMGMALIMEGVLSACYHVCPSHSNFQFDTSFMYVIAMLSLLKIY 419
P Y H FF +G A ++EGV S C + P + DTSFMY+IA L +LK+Y
Sbjct: 17 PLRVSYSSYHLILFFCELG-APLLEGVRSVCRLLDPDYLGSSADTSFMYMIAGLCMLKLY 75
Query: 420 QSRHPDINATAYSTFVALAFVIFVGMVGVL--DETLTFYVIFTVIHVLVCMVLSAQIYYM 477
Q+RHPDINA+AY+ + + A VI + ++GV+ + F+VIF+ IH+L + LS QIYYM
Sbjct: 76 QTRHPDINASAYAAYASFALVITLTVLGVVFGKNDMWFWVIFSAIHILASLALSTQIYYM 135
Query: 478 GRWKLDAR------VFHRVCGVCIADIRSGPRHCCRPMYPSRLVLLIFGNLFNWALAAAQ 531
GR+K+D +F R V D + RP+Y R+VLLI GNL NW+ A
Sbjct: 136 GRFKIDVSDTADWGIFRRAAVVFYTDCI---QQRSRPLYMDRMVLLIVGNLVNWSFALFG 192
Query: 532 LRYHMVNFGTYFLAVFMVNLCLYLMFYITMKYLSGEKIMAHTGLYLAASILLWTGALYFF 591
L Y +F +Y L +F+ NL LYL FYI MK S EKI+ + A+ ++W ALYFF
Sbjct: 193 LIYRPRDFASYMLGIFICNLLLYLAFYIIMKLRSSEKILLIPLFCIVATAVVWAAALYFF 252
Query: 592 FNKSISWAGTPAESRTYNRPCLVLNFYDHHDVWHVLSALAMFFSFMCLLALDDD 645
F SW GTPAESR NR C++L+F+D HD+WH LSA A+FFSF+ LL LDDD
Sbjct: 253 FQNLSSWEGTPAESREKNRECILLDFFDDHDIWHFLSATALFFSFLVLLTLDDD 306
>DICTYBASE|DDB_G0290761 [details] [associations]
symbol:sid1 "systemic RNA interference defective
protein 1" species:44689 "Dictyostelium discoideum" [GO:0051033
"RNA transmembrane transporter activity" evidence=IEA] [GO:0033227
"dsRNA transport" evidence=IEA] [GO:0016246 "RNA interference"
evidence=IEA;ISS] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005887 "integral to plasma membrane" evidence=ISS] [GO:0005215
"transporter activity" evidence=ISS] InterPro:IPR025958
Pfam:PF13965 dictyBase:DDB_G0290761 GO:GO:0005887 GO:GO:0016246
GenomeReviews:CM000154_GR GO:GO:0005215 GO:GO:0033227
EMBL:AAFI02000170 GO:GO:0051033 eggNOG:NOG75860
RefSeq:XP_001733041.1 EnsemblProtists:DDB0238081 GeneID:8627816
KEGG:ddi:DDB_G0290761 OMA:FWKILLI ProtClustDB:CLSZ2501694
Uniprot:B0G177
Length = 432
Score = 467 (169.5 bits), Expect = 2.4e-44, P = 2.4e-44
Identities = 107/339 (31%), Positives = 171/339 (50%)
Query: 312 EDMCYYNYLCSHPFWNLSDINHIFSNIGYVFLGFLFILITVNRERASLPNNKRYGIPHHF 371
E CYYNY C PF + N++ SN+ Y+ G FILIT S + +G+
Sbjct: 90 EIKCYYNYKCLRPFLGIPSFNNVLSNLFYLIAGTSFILIT---HFTSHQEDGIHGLHTDL 146
Query: 372 GFFYSMGMALIMEGVLSACYHVCPSHSNFQFDTSFMYVIAMLSLLKIYQSRHPDINATAY 431
+YS+G+ +I+EG+ SA YHVCPS NFQFDT++M + + L ++Q RH + A A+
Sbjct: 147 SLYYSLGLTIILEGIFSALYHVCPSRLNFQFDTTYMLIGSGLLFFALHQKRHATLTAGAF 206
Query: 432 STFVALAFVIFVGMVGVLDETL-TFYVIFTVIHVLVCMVLSAQIYYMGRWKLDARVFHRV 490
+ + IF + + + + F+V+F ++ V ++ S+ Y + ++D +
Sbjct: 207 KAYGFFSLFIFFNFLSLTNINIYAFWVMFVIVFGYVSIIGSS--YLLAHKRMD---LNPS 261
Query: 491 CGVCIADIRSGPRHCCRPMYPSRLVLLIFGNLFNWALAAAQLRYHMV-----NFGTYFLA 545
G ++ R P R L+ N+ +WA+ A Y M+ NF L
Sbjct: 262 IGFLWRTLKKLIRPSTIDDKP-RFFALLIANILSWAIVIAFAVYGMMGSISKNFSNLILG 320
Query: 546 VFMVNLCLYLMFYITMKYLSGEKIMAHTGLYLAASILLWTGALYFFFNKSISWAGTPAES 605
V +++ +YL +YI MK GEK+ + A L W LY+F + T ES
Sbjct: 321 VMVLDFLIYLFYYIAMKIKYGEKVYLFVWVLFAIMFLSWGFGLYYFEISVTNKFYTFDES 380
Query: 606 RTYNRPCLVLNFYDHHDVWHVLSALAMFFSFMCLLALDD 644
NRPC++ N++D HD+WH LSA+ +F S M ++ D
Sbjct: 381 LLLNRPCIIFNYWDTHDLWHFLSAIGLF-SIMAIVYFVD 418
Score = 121 (47.7 bits), Expect = 0.00084, Sum P(2) = 0.00084
Identities = 21/45 (46%), Positives = 30/45 (66%)
Query: 254 SPEEPTRYGIPHHFGFFYSMGMALIMEGVLSACYHVCPSHSNFQF 298
S +E +G+ +YS+G+ +I+EG+ SA YHVCPS NFQF
Sbjct: 133 SHQEDGIHGLHTDLSLYYSLGLTIILEGIFSALYHVCPSRLNFQF 177
Score = 41 (19.5 bits), Expect = 0.00084, Sum P(2) = 0.00084
Identities = 8/32 (25%), Positives = 14/32 (43%)
Query: 311 NEDMCYYNYLCSHPFWNLSDINHIFSNIGYVF 342
N +NY +H W+ +FS + V+
Sbjct: 384 NRPCIIFNYWDTHDLWHFLSAIGLFSIMAIVY 415
>WB|WBGene00004795 [details] [associations]
symbol:sid-1 species:6239 "Caenorhabditis elegans"
[GO:0016246 "RNA interference" evidence=IEA;IDA;IMP] [GO:0033227
"dsRNA transport" evidence=IEA;IMP;IDA] [GO:0051033 "RNA
transmembrane transporter activity" evidence=IEA;IMP;IDA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0005887 "integral to plasma
membrane" evidence=IDA] InterPro:IPR025958 Pfam:PF13965
GO:GO:0005887 GO:GO:0016246 GO:GO:0033227 GO:GO:0051033
EMBL:AF478687 EMBL:FO080342 RefSeq:NP_504372.2 UniGene:Cel.179
STRING:Q9GZC8 TCDB:9.A.24.1.1 EnsemblMetazoa:C04F5.1 GeneID:178900
KEGG:cel:CELE_C04F5.1 UCSC:C04F5.1 CTD:178900 WormBase:C04F5.1
eggNOG:NOG239532 GeneTree:ENSGT00390000010091 HOGENOM:HOG000018615
InParanoid:Q9GZC8 OMA:MANRDEM NextBio:903042 Uniprot:Q9GZC8
Length = 776
Score = 238 (88.8 bits), Expect = 4.2e-36, Sum P(3) = 4.2e-36
Identities = 50/137 (36%), Positives = 76/137 (55%)
Query: 512 SRLVLLIFGNLFNWALAAAQLR---YHMVNFGTYFLAVFMVNLCLYLMFYITMKYLSGEK 568
+R ++ F ++ N+A L +H+ TY F++N +YLM+Y MK L E+
Sbjct: 632 TRFFIMAF-SMGNFAAIVMYLTLSAFHLNQIATY---CFIINCIMYLMYYGCMKVLHSER 687
Query: 569 IMAHTGLYLAASILLWTGALYFFFNKSISWAGTPAESRTYNRPCLVLNFYDHHDVWHVLS 628
I + L A S+L W A +FFF W + A SR N+PCL+L F+ HD+WH+
Sbjct: 688 ITSKAKLCGALSLLAWAVAGFFFFQDDTDWTRSAAASRALNKPCLLLGFFGSHDLWHIFG 747
Query: 629 ALAMFFSFMCLLALDDD 645
ALA F+F+ + +DDD
Sbjct: 748 ALAGLFTFIFVSFVDDD 764
Score = 222 (83.2 bits), Expect = 4.2e-36, Sum P(3) = 4.2e-36
Identities = 54/186 (29%), Positives = 96/186 (51%)
Query: 309 SGNEDMCYYNYLCSHPFWNLSDINHIFSNIGYVFLGFLFILITVNRERASLPNNKRYGIP 368
+ ++MC++N+ C+ P L N+I +NIGY G +FI++++ R R+
Sbjct: 458 ANRDEMCFHNHACARPLGELRAWNNIITNIGYTLYGAIFIVLSICRRG-------RHEYS 510
Query: 369 HHFGFF------YSMGMALIMEGVLSACYHVCPSHSNFQFDTSFMYVIAMLSLLKIYQSR 422
H FG + ++G+ ++++ + SA YH+CPS FQFDT + VI L +++ + R
Sbjct: 511 HVFGTYECTLLDVTIGVFMVLQSIASATYHICPSDVAFQFDTPCIQVICGLLMVRQWFVR 570
Query: 423 HPDINATAYSTFVALAFVIFVGMVGVLDETLTFYVIFTVIHVLVC-MVLSAQIYYMGRWK 481
H + + AY+ + + V ++ +T I VIHV+V + A+ +G K
Sbjct: 571 H-ESPSPAYTNILLVGVVSLNFLISAFSKTSYVRFIIAVIHVIVVGSICLAKERSLGSEK 629
Query: 482 LDARVF 487
L R F
Sbjct: 630 LKTRFF 635
Score = 76 (31.8 bits), Expect = 5.4e-21, Sum P(3) = 5.4e-21
Identities = 15/45 (33%), Positives = 26/45 (57%)
Query: 260 RYGIPHHFGFF------YSMGMALIMEGVLSACYHVCPSHSNFQF 298
R+ H FG + ++G+ ++++ + SA YH+CPS FQF
Sbjct: 506 RHEYSHVFGTYECTLLDVTIGVFMVLQSIASATYHICPSDVAFQF 550
Score = 58 (25.5 bits), Expect = 4.2e-36, Sum P(3) = 4.2e-36
Identities = 25/129 (19%), Positives = 56/129 (43%)
Query: 88 LSDQRHLMASPSEPIFYNFQFDHMTESVLLVVESSDELCMTLSVQNISCPVVDLE--RNV 145
LS+Q+ P F N ++++ + + S D++C L + + D +
Sbjct: 189 LSNQKLTFVKPIG-FFLNCSEQNISQ-FHVTLYSEDDICANLITVPANESIYDRSVISDK 246
Query: 146 QYRGQWQTVSSKGGMLLKKSDFPL-GLFIVFV-VHSDDYDCSGHKGSFQFKRNKAISFSI 203
+ + + + + + +++ + F +FV + DD CS + F K ISF
Sbjct: 247 THNRRVLSFTKRADIFFTETEISMFKSFRIFVFIAPDDSGCSTNTSRKSFNEKKKISFEF 306
Query: 204 EKNISDENY 212
+K + +++Y
Sbjct: 307 KK-LENQSY 314
Score = 58 (25.5 bits), Expect = 4.2e-36, Sum P(3) = 4.2e-36
Identities = 37/178 (20%), Positives = 74/178 (41%)
Query: 13 FIVFV-VHSDDYDCSGHKGSFQFKRNKAISFSIEKNISDENYXXXXXXXXXXFAGIYVVA 71
F +FV + DD CS + F K ISF +K + +++Y ++
Sbjct: 274 FRIFVFIAPDDSGCSTNTSRKSFNEKKKISFEFKK-LENQSYAVPTALMMIFLTTPCLLF 332
Query: 72 FFIGIKCIRCCPSMYMLSDQRHLMAS---PSEPIFYNFQFDHM--TESVLL----VVESS 122
I I I+ S + Q +L++ PSE + D T S L + +
Sbjct: 333 LPIVINIIK--NSRKLAPSQSNLISFSPVPSEQRDMDLSHDEQQNTSSELENNGEIPAAE 390
Query: 123 DELCMTLSVQNISCPVVDLERNVQYRGQWQTVS-SKGGMLLKKSDFPLGLFIVFVVHS 179
+++ ++ +N V + R +Q + + S S G +L+ +P+ + + ++H+
Sbjct: 391 NQIVEEITAENQETSVEEGNREIQVKIPLKQDSLSLHGQMLQ---YPVAIILPVLMHT 445
>UNIPROTKB|Q9GZC8 [details] [associations]
symbol:sid-1 "Systemic RNA interference defective protein
1" species:6239 "Caenorhabditis elegans" [GO:0005215 "transporter
activity" evidence=NAS] [GO:0016021 "integral to membrane"
evidence=NAS] [GO:0016246 "RNA interference" evidence=IEP]
InterPro:IPR025958 Pfam:PF13965 GO:GO:0005887 GO:GO:0016246
GO:GO:0033227 GO:GO:0051033 EMBL:AF478687 EMBL:FO080342
RefSeq:NP_504372.2 UniGene:Cel.179 STRING:Q9GZC8 TCDB:9.A.24.1.1
EnsemblMetazoa:C04F5.1 GeneID:178900 KEGG:cel:CELE_C04F5.1
UCSC:C04F5.1 CTD:178900 WormBase:C04F5.1 eggNOG:NOG239532
GeneTree:ENSGT00390000010091 HOGENOM:HOG000018615 InParanoid:Q9GZC8
OMA:MANRDEM NextBio:903042 Uniprot:Q9GZC8
Length = 776
Score = 238 (88.8 bits), Expect = 4.2e-36, Sum P(3) = 4.2e-36
Identities = 50/137 (36%), Positives = 76/137 (55%)
Query: 512 SRLVLLIFGNLFNWALAAAQLR---YHMVNFGTYFLAVFMVNLCLYLMFYITMKYLSGEK 568
+R ++ F ++ N+A L +H+ TY F++N +YLM+Y MK L E+
Sbjct: 632 TRFFIMAF-SMGNFAAIVMYLTLSAFHLNQIATY---CFIINCIMYLMYYGCMKVLHSER 687
Query: 569 IMAHTGLYLAASILLWTGALYFFFNKSISWAGTPAESRTYNRPCLVLNFYDHHDVWHVLS 628
I + L A S+L W A +FFF W + A SR N+PCL+L F+ HD+WH+
Sbjct: 688 ITSKAKLCGALSLLAWAVAGFFFFQDDTDWTRSAAASRALNKPCLLLGFFGSHDLWHIFG 747
Query: 629 ALAMFFSFMCLLALDDD 645
ALA F+F+ + +DDD
Sbjct: 748 ALAGLFTFIFVSFVDDD 764
Score = 222 (83.2 bits), Expect = 4.2e-36, Sum P(3) = 4.2e-36
Identities = 54/186 (29%), Positives = 96/186 (51%)
Query: 309 SGNEDMCYYNYLCSHPFWNLSDINHIFSNIGYVFLGFLFILITVNRERASLPNNKRYGIP 368
+ ++MC++N+ C+ P L N+I +NIGY G +FI++++ R R+
Sbjct: 458 ANRDEMCFHNHACARPLGELRAWNNIITNIGYTLYGAIFIVLSICRRG-------RHEYS 510
Query: 369 HHFGFF------YSMGMALIMEGVLSACYHVCPSHSNFQFDTSFMYVIAMLSLLKIYQSR 422
H FG + ++G+ ++++ + SA YH+CPS FQFDT + VI L +++ + R
Sbjct: 511 HVFGTYECTLLDVTIGVFMVLQSIASATYHICPSDVAFQFDTPCIQVICGLLMVRQWFVR 570
Query: 423 HPDINATAYSTFVALAFVIFVGMVGVLDETLTFYVIFTVIHVLVC-MVLSAQIYYMGRWK 481
H + + AY+ + + V ++ +T I VIHV+V + A+ +G K
Sbjct: 571 H-ESPSPAYTNILLVGVVSLNFLISAFSKTSYVRFIIAVIHVIVVGSICLAKERSLGSEK 629
Query: 482 LDARVF 487
L R F
Sbjct: 630 LKTRFF 635
Score = 76 (31.8 bits), Expect = 5.4e-21, Sum P(3) = 5.4e-21
Identities = 15/45 (33%), Positives = 26/45 (57%)
Query: 260 RYGIPHHFGFF------YSMGMALIMEGVLSACYHVCPSHSNFQF 298
R+ H FG + ++G+ ++++ + SA YH+CPS FQF
Sbjct: 506 RHEYSHVFGTYECTLLDVTIGVFMVLQSIASATYHICPSDVAFQF 550
Score = 58 (25.5 bits), Expect = 4.2e-36, Sum P(3) = 4.2e-36
Identities = 25/129 (19%), Positives = 56/129 (43%)
Query: 88 LSDQRHLMASPSEPIFYNFQFDHMTESVLLVVESSDELCMTLSVQNISCPVVDLE--RNV 145
LS+Q+ P F N ++++ + + S D++C L + + D +
Sbjct: 189 LSNQKLTFVKPIG-FFLNCSEQNISQ-FHVTLYSEDDICANLITVPANESIYDRSVISDK 246
Query: 146 QYRGQWQTVSSKGGMLLKKSDFPL-GLFIVFV-VHSDDYDCSGHKGSFQFKRNKAISFSI 203
+ + + + + + +++ + F +FV + DD CS + F K ISF
Sbjct: 247 THNRRVLSFTKRADIFFTETEISMFKSFRIFVFIAPDDSGCSTNTSRKSFNEKKKISFEF 306
Query: 204 EKNISDENY 212
+K + +++Y
Sbjct: 307 KK-LENQSY 314
Score = 58 (25.5 bits), Expect = 4.2e-36, Sum P(3) = 4.2e-36
Identities = 37/178 (20%), Positives = 74/178 (41%)
Query: 13 FIVFV-VHSDDYDCSGHKGSFQFKRNKAISFSIEKNISDENYXXXXXXXXXXFAGIYVVA 71
F +FV + DD CS + F K ISF +K + +++Y ++
Sbjct: 274 FRIFVFIAPDDSGCSTNTSRKSFNEKKKISFEFKK-LENQSYAVPTALMMIFLTTPCLLF 332
Query: 72 FFIGIKCIRCCPSMYMLSDQRHLMAS---PSEPIFYNFQFDHM--TESVLL----VVESS 122
I I I+ S + Q +L++ PSE + D T S L + +
Sbjct: 333 LPIVINIIK--NSRKLAPSQSNLISFSPVPSEQRDMDLSHDEQQNTSSELENNGEIPAAE 390
Query: 123 DELCMTLSVQNISCPVVDLERNVQYRGQWQTVS-SKGGMLLKKSDFPLGLFIVFVVHS 179
+++ ++ +N V + R +Q + + S S G +L+ +P+ + + ++H+
Sbjct: 391 NQIVEEITAENQETSVEEGNREIQVKIPLKQDSLSLHGQMLQ---YPVAIILPVLMHT 445
>UNIPROTKB|G3V172 [details] [associations]
symbol:SIDT2 "SID1 transmembrane family member 2"
species:9606 "Homo sapiens" [GO:0016246 "RNA interference"
evidence=IEA] [GO:0033227 "dsRNA transport" evidence=IEA]
[GO:0051033 "RNA transmembrane transporter activity" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0005765
"lysosomal membrane" evidence=IEA] InterPro:IPR025958 Pfam:PF13965
GO:GO:0016021 GO:GO:0016246 EMBL:CH471065 GO:GO:0005765
GO:GO:0033227 EMBL:AP005018 GO:GO:0051033 PANTHER:PTHR32543
UniGene:Hs.712144 HGNC:HGNC:24272 ChiTaRS:SIDT2
Ensembl:ENST00000532062 ArrayExpress:G3V172 Bgee:G3V172
Uniprot:G3V172
Length = 124
Score = 290 (107.1 bits), Expect = 9.9e-25, P = 9.9e-25
Identities = 54/108 (50%), Positives = 74/108 (68%)
Query: 538 NFGTYFLAVFMVNLCLYLMFYITMKYLSGEKIMAHTGLYLAASILLWTGALYFFFNKSIS 597
+F +Y LA+ + NL LY FYI MK SGE+I L + + ++W AL+FFF +
Sbjct: 5 DFASYLLAIGICNLLLYFAFYIIMKLRSGERIKLIPLLCIVCTSVVWGFALFFFFQGLST 64
Query: 598 WAGTPAESRTYNRPCLVLNFYDHHDVWHVLSALAMFFSFMCLLALDDD 645
W TPAESR +NR C++L+F+D HD+WH LS++AMF SF+ LL LDDD
Sbjct: 65 WQKTPAESREHNRDCILLDFFDDHDIWHFLSSIAMFGSFLVLLTLDDD 112
>UNIPROTKB|H0YEI3 [details] [associations]
symbol:SIDT2 "SID1 transmembrane family member 2"
species:9606 "Homo sapiens" [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0016246 "RNA interference" evidence=IEA]
[GO:0033227 "dsRNA transport" evidence=IEA] [GO:0051033 "RNA
transmembrane transporter activity" evidence=IEA]
InterPro:IPR025958 Pfam:PF13965 GO:GO:0016021 GO:GO:0016246
GO:GO:0033227 EMBL:AP005018 GO:GO:0051033 PANTHER:PTHR32543
HGNC:HGNC:24272 ChiTaRS:SIDT2 Ensembl:ENST00000525478 Bgee:H0YEI3
Uniprot:H0YEI3
Length = 133
Score = 179 (68.1 bits), Expect = 9.3e-13, P = 9.3e-13
Identities = 37/69 (53%), Positives = 47/69 (68%)
Query: 579 ASILLWTGA--LYFFFNKSISWAGTPAESRTYNRPCLVLNFYDHHDVWHVLSALAMFFSF 636
AS LL G L +F I TPAESR +NR C++L+F+D HD+WH LS++AMF SF
Sbjct: 53 ASYLLAIGICNLLLYFAFYIIMKKTPAESREHNRDCILLDFFDDHDIWHFLSSIAMFGSF 112
Query: 637 MCLLALDDD 645
+ LL LDDD
Sbjct: 113 LVLLTLDDD 121
Score = 155 (59.6 bits), Expect = 3.5e-10, P = 3.5e-10
Identities = 34/82 (41%), Positives = 45/82 (54%)
Query: 486 VFHRVCGVCIADIRSGPRHCCRPMYPSRLVLLIFGNLFNWALAAAQLRYHMVNFGTYFLA 545
+F R+ V D R C P+Y R+VLL+ GN+ NW+LAA L +F +Y LA
Sbjct: 2 IFRRILHVLYTDCI---RQCSGPLYVDRMVLLVMGNVINWSLAAYGLIMRPNDFASYLLA 58
Query: 546 VFMVNLCLYLMFYITMKYLSGE 567
+ + NL LY FYI MK E
Sbjct: 59 IGICNLLLYFAFYIIMKKTPAE 80
>UNIPROTKB|E9PPN9 [details] [associations]
symbol:SIDT2 "SID1 transmembrane family member 2"
species:9606 "Homo sapiens" [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0016246 "RNA interference" evidence=IEA]
[GO:0033227 "dsRNA transport" evidence=IEA] [GO:0051033 "RNA
transmembrane transporter activity" evidence=IEA] [GO:0005765
"lysosomal membrane" evidence=IEA] InterPro:IPR025958 Pfam:PF13965
GO:GO:0016021 GO:GO:0016246 GO:GO:0005765 GO:GO:0033227
EMBL:AP005018 GO:GO:0051033 PANTHER:PTHR32543 HGNC:HGNC:24272
ChiTaRS:SIDT2 IPI:IPI00983846 Ensembl:ENST00000524842
ArrayExpress:E9PPN9 Bgee:E9PPN9 Uniprot:E9PPN9
Length = 171
Score = 177 (67.4 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 39/155 (25%), Positives = 76/155 (49%)
Query: 90 DQRHLMASPSEPIFYNFQFDHMTESVLLVVESSDEL-CMTLSVQNISCPVVDLERNVQYR 148
+Q + ++P ++ ++F +SV++ V S+ C +S+Q++ CPV DL+ NV +
Sbjct: 10 EQFSFNTTAAQPQYFKYEFPEGVDSVIVKVTSNKAFPCSVISIQDVLCPVYDLDNNVAFI 69
Query: 149 GQWQTVSSKGGMLLKKSDFPLGLF-IVFVVHSDDYDCSGHKGSFQFK---------RNKA 198
G +QT++ K + +++ DFP F +V VV ++D C G + F R K
Sbjct: 70 GMYQTMTKKAAITVQRKDFPSNSFYVVVVVKTEDQACGGSLPFYPFAEDEPVDQGHRQKT 129
Query: 199 ISFSIEKNISDENYXXXXXXXXXXFAGIYVVAFFI 233
+S + + ++ E Y F Y++ +
Sbjct: 130 LSVLVSQAVTSEAYVSGMLFCLGIFLSFYLLTVLL 164
>WB|WBGene00012573 [details] [associations]
symbol:Y37H2C.1 species:6239 "Caenorhabditis elegans"
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0016246 "RNA
interference" evidence=IEA] [GO:0033227 "dsRNA transport"
evidence=IEA] [GO:0051033 "RNA transmembrane transporter activity"
evidence=IEA] InterPro:IPR025958 Pfam:PF13965 GO:GO:0016021
GO:GO:0016246 GO:GO:0033227 GO:GO:0051033
GeneTree:ENSGT00390000007321 HOGENOM:HOG000015830 eggNOG:NOG276208
EMBL:AL023837 PIR:T26646 RefSeq:NP_507576.1 UniGene:Cel.1878
ProteinModelPortal:Q9XXF4 EnsemblMetazoa:Y37H2C.1 GeneID:189635
KEGG:cel:CELE_Y37H2C.1 UCSC:Y37H2C.1 CTD:189635 WormBase:Y37H2C.1
InParanoid:Q9XXF4 OMA:IRFEWSS NextBio:943090 Uniprot:Q9XXF4
Length = 718
Score = 114 (45.2 bits), Expect = 2.2e-10, Sum P(3) = 2.2e-10
Identities = 32/116 (27%), Positives = 56/116 (48%)
Query: 72 FFIGIKCIRCCPSMYMLSDQRHLMASPSEPIFYNFQFDHMTESVLLVVESSDELCMTLSV 131
F I +K ++ + ++ S+Q + SP EP +Y + F E V + S +C L
Sbjct: 131 FSIRVKPVK---NFHIGSNQFEVHTSPPEPRYYLYTFPENVEKVNIRAFSDSSICGKLIA 187
Query: 132 QNISCPVVDLERNVQYRGQ---WQTVSSKGGMLLKKSDFPLGLFIVFVVHSDDYDC 184
+ + CP+ D V+ +G+ +Q+ + G +KKSD + VV+ DD C
Sbjct: 188 RRVECPLFDRSGLVE-QGEDYFFQSYTKFAGFPIKKSDIGSQFHLAVVVNPDDSIC 242
Score = 98 (39.6 bits), Expect = 2.2e-10, Sum P(3) = 2.2e-10
Identities = 44/171 (25%), Positives = 70/171 (40%)
Query: 311 NEDMCYYNYLCSHPFWNLSDINHIFSNIGYVFLGFLFILITVNRE--RASLPN-NKRYGI 367
N D CY NY CS + N + S LG + ++I ++ R +P GI
Sbjct: 383 NLDTCYLNYRCSLNVIGFNSFNSMTSASSLAVLGIINLIIVFRKQIFRYEIPRFPTSRGI 442
Query: 368 PHHFGFFYSMGMALIMEGVLSACYHVCPSHSNFQF-DTSFMYVIAMLSLLKIYQSRHPD- 425
+ L+ GV SA + C S QF D + ++ + +LL IY RH
Sbjct: 443 QQRDAPKIVCLLGLVALGVYSAILNNCQQKSMLQFYDYTILW-LQYSALLWIYSKRHGMF 501
Query: 426 INATAYSTFVALAFVIF-VGMVGVLDETLTFYVIFTVI--HVLVCMVLSAQ 473
+ ++ + + F I +G G FY + + H +C LS+Q
Sbjct: 502 VVDSSLRLIIKIVFSICSIGFTGYFAYKY-FYERPSGLQSHQWICTPLSSQ 551
Score = 64 (27.6 bits), Expect = 2.2e-10, Sum P(3) = 2.2e-10
Identities = 31/110 (28%), Positives = 51/110 (46%)
Query: 537 VNFGTYFLAVFMVNLCLYLMFYITMK--YLSGEKIMAHT--GLYLAASILLW-TGALYFF 591
V+ YF A L +YL FYI K + ++T ++L ++L+ T YF
Sbjct: 595 VHSAIYFSA--KGQLVIYLFFYIIQKIRFEWSSFTFSYTIRCIFLIVFLVLFQTLNRYFA 652
Query: 592 -FNKSISWAGTPAESRTYNRPCLVLNFYDHHDVWHVLSALAMFFSFMCLL 640
F ++ +PA SR N C++ D ++V H + + F F+ LL
Sbjct: 653 NFASPFNFYESPALSRELNSECIIPGI-DWNNVRHYNAVITCSF-FILLL 700
Score = 42 (19.8 bits), Expect = 8.6e-05, Sum P(3) = 8.6e-05
Identities = 14/44 (31%), Positives = 17/44 (38%)
Query: 255 PEEPTRYGIPHHFGFFYSMGMALIMEGVLSACYHVCPSHSNFQF 298
P PT GI + L+ GV SA + C S QF
Sbjct: 434 PRFPTSRGIQQRDAPKIVCLLGLVALGVYSAILNNCQQKSMLQF 477
>WB|WBGene00015583 [details] [associations]
symbol:C08A9.3 species:6239 "Caenorhabditis elegans"
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0016246 "RNA
interference" evidence=IEA] [GO:0033227 "dsRNA transport"
evidence=IEA] [GO:0051033 "RNA transmembrane transporter activity"
evidence=IEA] [GO:0008340 "determination of adult lifespan"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] InterPro:IPR025958
Pfam:PF13965 GO:GO:0016021 GO:GO:0008340 GO:GO:0040007
GO:GO:0002119 GO:GO:0016246 GO:GO:0033227 GO:GO:0051033
EMBL:FO080426 GeneID:182383 KEGG:cel:CELE_C08A9.3 CTD:182383
GeneTree:ENSGT00390000007321 RefSeq:NP_001257284.1
EnsemblMetazoa:C08A9.3b WormBase:C08A9.3b OMA:RHENNEP
Uniprot:H2KYK1
Length = 739
Score = 118 (46.6 bits), Expect = 2.3e-10, Sum P(3) = 2.3e-10
Identities = 31/106 (29%), Positives = 50/106 (47%)
Query: 97 SPSEPIFYNFQFDHMTESVLLVVESSDELCMTLSVQNISCPVVD----LERNVQYRGQWQ 152
SPSEP +Y + F + V + V S E+C + + ++CP+ D LE++ + +Q
Sbjct: 155 SPSEPRYYMYTFPDDVDKVDIRVTSPSEICGKIVARRVNCPLFDASGLLEQSETFF--YQ 212
Query: 153 TVSSKGGMLLKKSDFPLGLFIVFVVHSDDYDCSGHKGSFQFKRNKA 198
+ ++ G LKKS + F VH D+ C F N A
Sbjct: 213 SFTTFAGFSLKKSVIGRQFHLAFTVHPDETLCGTPDNFFDIPNNPA 258
Score = 94 (38.1 bits), Expect = 2.3e-10, Sum P(3) = 2.3e-10
Identities = 45/194 (23%), Positives = 76/194 (39%)
Query: 296 FQ-FGSRKPKV--LND----SGNEDMCYYNYLCSHPFWNLSDINHIFSNIGYVFLGFLFI 348
FQ FGS P + L D S N + CY N+LCS F N + S +G L +
Sbjct: 359 FQIFGSILPSLTTLFDKQKTSNNLNFCYLNFLCSLEFLCFKSFNSMTSASSLAVIGVLNL 418
Query: 349 LITVNRERA---SLPN-NKRYGIPHHFGFFYSMGMALIMEGVLSACYHVCPSHSNFQFDT 404
+I V RE+ +P +G+ + L+ G+L + CP + D
Sbjct: 419 II-VFREKIFSFKIPRLPTTHGLQQRDAPKVVCFLGLVSMGILWTITNNCPHRTTIHLDM 477
Query: 405 SFMYVIAMLSLLKIYQSRHPDINATAYSTFVALAFVIFVGMVGVLDETLTFYVIFT-VIH 463
I + + IY RH + F +A G + + + + V+
Sbjct: 478 YTSSWIFYAAFMWIYSKRH---GVRKWQQFFIIAVSSIYGCLTLAENMFNVNSVSRWVVK 534
Query: 464 VLVCMV-LSAQIYY 476
+L + +S+ +Y+
Sbjct: 535 ILFSLTAISSTVYF 548
Score = 64 (27.6 bits), Expect = 2.3e-10, Sum P(3) = 2.3e-10
Identities = 18/44 (40%), Positives = 24/44 (54%)
Query: 601 TPAESRTYNRPCLVLNFYDHHDVWHVLSALAMFFSFMCLLALDD 644
TPA+SR N C VL D +D+ H A+ F F+CL+ D
Sbjct: 684 TPAKSRQLNMDC-VLPGIDLNDLRHYSCAVDCFL-FICLMDFID 725
>UNIPROTKB|F1MVZ5 [details] [associations]
symbol:SIDT2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051033 "RNA transmembrane transporter activity"
evidence=IEA] [GO:0033227 "dsRNA transport" evidence=IEA]
[GO:0016246 "RNA interference" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] InterPro:IPR025958 Pfam:PF13965
GO:GO:0016021 GO:GO:0016246 GO:GO:0033227 GO:GO:0051033
GeneTree:ENSGT00390000010091 PANTHER:PTHR32543 EMBL:DAAA02040390
IPI:IPI00699046 Ensembl:ENSBTAT00000009467 ArrayExpress:F1MVZ5
Uniprot:F1MVZ5
Length = 460
Score = 176 (67.0 bits), Expect = 4.3e-10, P = 4.3e-10
Identities = 38/146 (26%), Positives = 73/146 (50%)
Query: 99 SEPIFYNFQFDHMTESVLLVVESSDEL-CMTLSVQNISCPVVDLERNVQYRGQWQTVSSK 157
++P ++ ++F +SV++ V S+ C +S+Q++ CPV DL+ NV + G +QT++ K
Sbjct: 169 AQPQYFKYEFPEGVDSVIVKVASNTAFPCSVISIQDVLCPVYDLDNNVAFIGMYQTMTKK 228
Query: 158 GGMLLKKSDFPLGLF-IVFVVHSDDYDCSGHKGSFQF---------KRNKAISFSIEKNI 207
+ +++ DFP F +V VV ++D C G + F R K +S + + +
Sbjct: 229 AAITVQRKDFPSNSFYVVVVVKTEDQACGGSLPFYPFIEDEPVDQGHRQKTLSVLVSRAV 288
Query: 208 SDENYXXXXXXXXXXFAGIYVVAFFI 233
+ E Y F Y++ +
Sbjct: 289 TSEAYVGGMLFCLGIFLSFYLLTVLL 314
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.331 0.143 0.464 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 654 634 0.00092 120 3 11 21 0.39 33
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 35
No. of states in DFA: 624 (66 KB)
Total size of DFA: 375 KB (2181 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:02
No. of threads or processors used: 24
Search cpu time: 49.11u 0.09s 49.20t Elapsed: 00:00:25
Total cpu time: 49.13u 0.09s 49.22t Elapsed: 00:00:32
Start: Thu Aug 15 10:49:49 2013 End: Thu Aug 15 10:50:21 2013