BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy2446
(500 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1W0E|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0F|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0G|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|2J0D|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2J0D|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2V0M|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|C Chain C, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|D Chain D, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|3NXU|A Chain A, Crystal Structure Of Human Cytochrome P4503a4 Bound To An
Inhibitor Ritonavir
pdb|3NXU|B Chain B, Crystal Structure Of Human Cytochrome P4503a4 Bound To An
Inhibitor Ritonavir
Length = 485
Score = 263 bits (671), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 160/436 (36%), Positives = 246/436 (56%), Gaps = 26/436 (5%)
Query: 55 FLSRI-TFHQMHCEFYNKIKYDLKLPYG---GLYHLMTPKLMVTDPELYKYILIKD-FDH 109
FL I ++H+ C F + YG G Y P L +TDP++ K +L+K+ +
Sbjct: 24 FLGNILSYHKGFCMF----DMECHKKYGKVWGFYDGQQPVLAITDPDMIKTVLVKECYSV 79
Query: 110 FVDR-GIGESDAKRDPIEGHLFGSKGEYWKRLRNKLSPTFTSGKIKYMFPLIKKCSDQLI 168
F +R G + I ++ E WKRLR+ LSPTFTSGK+K M P+I + D L+
Sbjct: 80 FTNRRPFGPVGFMKSAISI----AEDEEWKRLRSLLSPTFTSGKLKEMVPIIAQYGDVLV 135
Query: 169 TTIRKQIGESKQMSLEVKDYCARYTTDVIGSTAFGIEINSLENPDSEFRQVSLLVMKPSV 228
+R++ K ++L KD Y+ DVI ST+FG+ I+SL NP F + + +++
Sbjct: 136 RNLRREAETGKPVTL--KDVFGAYSMDVITSTSFGVNIDSLNNPQDPFVENTKKLLRFDF 193
Query: 229 LQ---MLKAVLSELIPLIKYLNLKIFDPRISQFFSNLVKTNLSYR-EKNNIKRDDFLNIM 284
L + V LIP+++ LN+ +F ++ F VK R E R DFL +M
Sbjct: 194 LDPFFLSITVFPFLIPILEVLNICVFPREVTNFLRKSVKRMKESRLEDTQKHRVDFLQLM 253
Query: 285 MQLQIAQRGKTLSPDDVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKL 344
+ Q ++ ++ ++D + AQS +F F GYET+SSVL+F +YELA +PD+Q KL
Sbjct: 254 IDSQNSKETESHK----ALSDLELVAQSIIFIFAGYETTSSVLSFIMYELATHPDVQQKL 309
Query: 345 RQEIMATKKKEGELTYEICHKMSYLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLTLD 404
++EI A + TY+ +M YLD V E LR++P +L+R+ K ++ + +
Sbjct: 310 QEEIDAVLPNKAPPTYDTVLQMEYLDMVVNETLRLFPIAMRLERVCKKDVEI--NGMFIP 367
Query: 405 VGTKISIPTFAIHYDPEYYPDPEKFDPERFSPENIESRPHYTYLPFGDGPRNCIGMRFGT 464
G + IP++A+H DP+Y+ +PEKF PERFS +N ++ Y Y PFG GPRNCIGMRF
Sbjct: 368 KGVVVMIPSYALHRDPKYWTEPEKFLPERFSKKNKDNIDPYIYTPFGSGPRNCIGMRFAL 427
Query: 465 IQFKIGLAQLISNFEF 480
+ K+ L +++ NF F
Sbjct: 428 MNMKLALIRVLQNFSF 443
>pdb|1TQN|A Chain A, Crystal Structure Of Human Microsomal P450 3a4
Length = 486
Score = 262 bits (670), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 160/436 (36%), Positives = 246/436 (56%), Gaps = 26/436 (5%)
Query: 55 FLSRI-TFHQMHCEFYNKIKYDLKLPYG---GLYHLMTPKLMVTDPELYKYILIKD-FDH 109
FL I ++H+ C F + YG G Y P L +TDP++ K +L+K+ +
Sbjct: 25 FLGNILSYHKGFCMF----DMECHKKYGKVWGFYDGQQPVLAITDPDMIKTVLVKECYSV 80
Query: 110 FVDR-GIGESDAKRDPIEGHLFGSKGEYWKRLRNKLSPTFTSGKIKYMFPLIKKCSDQLI 168
F +R G + I ++ E WKRLR+ LSPTFTSGK+K M P+I + D L+
Sbjct: 81 FTNRRPFGPVGFMKSAISI----AEDEEWKRLRSLLSPTFTSGKLKEMVPIIAQYGDVLV 136
Query: 169 TTIRKQIGESKQMSLEVKDYCARYTTDVIGSTAFGIEINSLENPDSEFRQVSLLVMKPSV 228
+R++ K ++L KD Y+ DVI ST+FG+ I+SL NP F + + +++
Sbjct: 137 RNLRREAETGKPVTL--KDVFGAYSMDVITSTSFGVNIDSLNNPQDPFVENTKKLLRFDF 194
Query: 229 LQ---MLKAVLSELIPLIKYLNLKIFDPRISQFFSNLVKTNLSYR-EKNNIKRDDFLNIM 284
L + V LIP+++ LN+ +F ++ F VK R E R DFL +M
Sbjct: 195 LDPFFLSITVFPFLIPILEVLNICVFPREVTNFLRKSVKRMKESRLEDTQKHRVDFLQLM 254
Query: 285 MQLQIAQRGKTLSPDDVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKL 344
+ Q ++ ++ ++D + AQS +F F GYET+SSVL+F +YELA +PD+Q KL
Sbjct: 255 IDSQNSKETESHK----ALSDLELVAQSIIFIFAGYETTSSVLSFIMYELATHPDVQQKL 310
Query: 345 RQEIMATKKKEGELTYEICHKMSYLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLTLD 404
++EI A + TY+ +M YLD V E LR++P +L+R+ K ++ + +
Sbjct: 311 QEEIDAVLPNKAPPTYDTVLQMEYLDMVVNETLRLFPIAMRLERVCKKDVEI--NGMFIP 368
Query: 405 VGTKISIPTFAIHYDPEYYPDPEKFDPERFSPENIESRPHYTYLPFGDGPRNCIGMRFGT 464
G + IP++A+H DP+Y+ +PEKF PERFS +N ++ Y Y PFG GPRNCIGMRF
Sbjct: 369 KGVVVMIPSYALHRDPKYWTEPEKFLPERFSKKNKDNIDPYIYTPFGSGPRNCIGMRFAL 428
Query: 465 IQFKIGLAQLISNFEF 480
+ K+ L +++ NF F
Sbjct: 429 MNMKLALIRVLQNFSF 444
>pdb|3UA1|A Chain A, Crystal Structure Of The Cytochrome
P4503a4-Bromoergocryptine Complex
pdb|3TJS|A Chain A, Crystal Structure Of The Complex Between Human Cytochrome
P450 3a4 And Desthiazolylmethyloxycarbonyl Ritonavir
Length = 487
Score = 262 bits (670), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 160/436 (36%), Positives = 246/436 (56%), Gaps = 26/436 (5%)
Query: 55 FLSRI-TFHQMHCEFYNKIKYDLKLPYG---GLYHLMTPKLMVTDPELYKYILIKD-FDH 109
FL I ++H+ C F + YG G Y P L +TDP++ K +L+K+ +
Sbjct: 26 FLGNILSYHKGFCMF----DMECHKKYGKVWGFYDGQQPVLAITDPDMIKTVLVKECYSV 81
Query: 110 FVDR-GIGESDAKRDPIEGHLFGSKGEYWKRLRNKLSPTFTSGKIKYMFPLIKKCSDQLI 168
F +R G + I ++ E WKRLR+ LSPTFTSGK+K M P+I + D L+
Sbjct: 82 FTNRRPFGPVGFMKSAISI----AEDEEWKRLRSLLSPTFTSGKLKEMVPIIAQYGDVLV 137
Query: 169 TTIRKQIGESKQMSLEVKDYCARYTTDVIGSTAFGIEINSLENPDSEFRQVSLLVMKPSV 228
+R++ K ++L KD Y+ DVI ST+FG+ I+SL NP F + + +++
Sbjct: 138 RNLRREAETGKPVTL--KDVFGAYSMDVITSTSFGVNIDSLNNPQDPFVENTKKLLRFDF 195
Query: 229 LQ---MLKAVLSELIPLIKYLNLKIFDPRISQFFSNLVKTNLSYR-EKNNIKRDDFLNIM 284
L + V LIP+++ LN+ +F ++ F VK R E R DFL +M
Sbjct: 196 LDPFFLSITVFPFLIPILEVLNICVFPREVTNFLRKSVKRMKESRLEDTQKHRVDFLQLM 255
Query: 285 MQLQIAQRGKTLSPDDVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKL 344
+ Q ++ ++ ++D + AQS +F F GYET+SSVL+F +YELA +PD+Q KL
Sbjct: 256 IDSQNSKETESHK----ALSDLELVAQSIIFIFAGYETTSSVLSFIMYELATHPDVQQKL 311
Query: 345 RQEIMATKKKEGELTYEICHKMSYLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLTLD 404
++EI A + TY+ +M YLD V E LR++P +L+R+ K ++ + +
Sbjct: 312 QEEIDAVLPNKAPPTYDTVLQMEYLDMVVNETLRLFPIAMRLERVCKKDVEI--NGMFIP 369
Query: 405 VGTKISIPTFAIHYDPEYYPDPEKFDPERFSPENIESRPHYTYLPFGDGPRNCIGMRFGT 464
G + IP++A+H DP+Y+ +PEKF PERFS +N ++ Y Y PFG GPRNCIGMRF
Sbjct: 370 KGVVVMIPSYALHRDPKYWTEPEKFLPERFSKKNKDNIDPYIYTPFGSGPRNCIGMRFAL 429
Query: 465 IQFKIGLAQLISNFEF 480
+ K+ L +++ NF F
Sbjct: 430 MNMKLALIRVLQNFSF 445
>pdb|2Q9F|A Chain A, Crystal Structure Of Human Cytochrome P450 46a1 In Complex
With Cholesterol-3-Sulphate
pdb|2Q9G|A Chain A, Crystal Structure Of Human Cytochrome P450 46a1
pdb|3MDM|A Chain A, Thioperamide Complex Of Cytochrome P450 46a1
pdb|3MDR|A Chain A, Tranylcypromine Complex Of Cytochrome P450 46a1
pdb|3MDR|B Chain B, Tranylcypromine Complex Of Cytochrome P450 46a1
pdb|3MDT|A Chain A, Voriconazole Complex Of Cytochrome P450 46a1
pdb|3MDT|B Chain B, Voriconazole Complex Of Cytochrome P450 46a1
pdb|3MDV|A Chain A, Clotrimazole Complex Of Cytochrome P450 46a1
pdb|3MDV|B Chain B, Clotrimazole Complex Of Cytochrome P450 46a1
pdb|4ENH|A Chain A, Crystal Structure Of Human Cytochrome P450 Cyp46a1 With
Fluvoxamine Bound
pdb|4FIA|A Chain A, Crystal Structure Of Human Cyp46a1 P450 With Bicalutamide
Bound
Length = 456
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 100/400 (25%), Positives = 186/400 (46%), Gaps = 30/400 (7%)
Query: 91 LMVTDPELYKYILIK---DFDHFVDRGIGESDAKRDPIEGHLFGSKGEYWKRLRNKLSPT 147
++VT PE K L+ + D + R + +R +G + E W + R +
Sbjct: 37 VIVTSPESVKKFLMSTKYNKDSKMYRALQTVFGERLFGQGLVSECNYERWHKQRRVIDLA 96
Query: 148 FTSGKIKYMFPLIKKCSDQLITTIRKQIGESKQMSLEVKDYCARYTTDVIGSTAFGIEIN 207
F+ + + + ++QL+ + + Q + ++D D++ AFG+E +
Sbjct: 97 FSRSSLVSLMETFNEKAEQLVEILEAKA--DGQTPVSMQDMLTYTAMDILAKAAFGMETS 154
Query: 208 SLENPDSEFRQVSLLVMKPSVLQMLKAVLSELIPLIKYLNLK---IFDPRISQFFSNLVK 264
L Q +V ML+ + + L K+L K + + R S F V
Sbjct: 155 MLLGAQKPLSQ--------AVKLMLEGITASRNTLAKFLPGKRKQLREVRESIRFLRQVG 206
Query: 265 TNLSYREKNNIKRDDFL--NIMMQLQIAQRGKTLSPDDVEMTDDVITAQSFVFFFGGYET 322
+ R + +KR + + +I+ Q+ A+ G + DD + D+ +T FF G+ET
Sbjct: 207 RDWVQRRREALKRGEEVPADILTQILKAEEG---AQDDEGLLDNFVT-----FFIAGHET 258
Query: 323 SSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSYLDKVTKEALRMYPS 382
S++ L F + EL+R P+I ++L+ E+ + L +E ++ YL +V KE+LR+YP
Sbjct: 259 SANHLAFTVMELSRQPEIVARLQAEVDEVIGSKRYLDFEDLGRLQYLSQVLKESLRLYP- 317
Query: 383 LPQLDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPEYYPDPEKFDPERFSPENIESR 442
P + + + + + T + T+ + Y+ DP F+P+RF P +
Sbjct: 318 -PAWGTFRLLEEETLIDGVRVPGNTPLLFSTYVMGRMDTYFEDPLTFNPDRFGPGA--PK 374
Query: 443 PHYTYLPFGDGPRNCIGMRFGTIQFKIGLAQLISNFEFSI 482
P +TY PF G R+CIG +F ++ K+ +A+L+ EF +
Sbjct: 375 PRFTYFPFSLGHRSCIGQQFAQMEVKVVMAKLLQRLEFRL 414
>pdb|3QI8|B Chain B, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1)
pdb|3QI8|A Chain A, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1)
Length = 472
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 94/354 (26%), Positives = 163/354 (46%), Gaps = 34/354 (9%)
Query: 137 WKRLRNKLSPTFTSGKIKYMFPLIKKCSDQLITTIRKQIGESKQMSLEVKDYCARYTTDV 196
WK+ RN L P + +K ++ + QL+ + + +EV + R T D
Sbjct: 97 WKKARNILLPRLSQQAMKGYHAMMVDIAVQLVQKWERLNSDE---HIEVPEDMTRLTLDT 153
Query: 197 IGSTAFGIEINSLENPDSEFRQVSLLVMKPSVLQMLKAVLSELIPLIKYLNLK--IFDPR 254
IG F INS +R P + M++A L E++ ++ N +D
Sbjct: 154 IGLCGFNYRINSF------YRDQP----HPFITSMVRA-LDEVMNKLQRANPDDPAYDEN 202
Query: 255 ISQF------FSNLVKTNLSYREKNNIKRDDFLNIMMQLQIAQRGKTLSPDDVEMTDDVI 308
QF ++LV ++ R+ + + DD L M+ + + G+ L D+ I
Sbjct: 203 KRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLHGKDPETGEPLD-------DENI 255
Query: 309 TAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSY 368
Q F G+ET+S +LTF LY L +NP + K +E A + +Y+ ++ Y
Sbjct: 256 RYQIITFLIAGHETTSGLLTFALYFLVKNPHVLQKAAEE-AARVLVDPVPSYKQVKQLKY 314
Query: 369 LDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPEYYPDP-E 427
+ V EALR++P+ P + K+ + + L+ G ++ + +H D + D E
Sbjct: 315 VGMVLNEALRIWPTAPAFS-LYAKEDTMLGGEYPLEKGDELMVLIPQLHRDKTVWGDDVE 373
Query: 428 KFDPERFSPENIESRPHYTYLPFGDGPRNCIGMRFGTIQFKIGLAQLISNFEFS 481
+F PERF EN + P + + PFG+G R CIG +F + + L ++ +F+F
Sbjct: 374 EFRPERF--ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 425
>pdb|3CBD|A Chain A, Directed Evolution Of Cytochrome P450 Bm3, To Octane
Monoxygenase 139-3
pdb|3CBD|B Chain B, Directed Evolution Of Cytochrome P450 Bm3, To Octane
Monoxygenase 139-3
Length = 455
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 93/355 (26%), Positives = 167/355 (47%), Gaps = 36/355 (10%)
Query: 137 WKRLRNKLSPTFTSGKIKYMFPLIKKCSDQLITTIRKQIGESKQMSLEVKDYCARYTTDV 196
WK+ N L P+F+ +K ++ + QL+ + + +EV + R T D
Sbjct: 96 WKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADE---YIEVPEDMTRLTLDT 152
Query: 197 IGSTAFGIEINSLENPDSEFRQVSLLVMKPSVLQMLKAVLSELIPLIKYLNLK--IFDPR 254
IG F NS +R P ++ M++A L E++ ++ N +D
Sbjct: 153 IGLCGFNYRFNSF------YRDQP----HPFIISMIRA-LDEVMNKLQRANPDDPAYDEN 201
Query: 255 ISQF------FSNLVKTNLSYREKNNIKRDDFLNIMMQLQIAQRGKTLSPDDVEMTDDVI 308
QF ++LV ++ R+ + + DD L M+ + + G+ L D I
Sbjct: 202 KRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTQMLNGKDPETGEPLD-------DGNI 254
Query: 309 TAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGEL-TYEICHKMS 367
+ Q F G+ET+S +L+F LY L +NP + K+ +E AT+ + +Y+ ++
Sbjct: 255 SYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKVAEE--ATRVLVDPVPSYKQVKQLK 312
Query: 368 YLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPEYYPDP- 426
Y+ V EALR++P+ P + K+ + + L+ G ++ + +H D + D
Sbjct: 313 YVGMVLNEALRLWPTAPAFS-LYAKEDTVLGGEYPLEKGDEVMVLIPQLHRDKTIWGDDV 371
Query: 427 EKFDPERFSPENIESRPHYTYLPFGDGPRNCIGMRFGTIQFKIGLAQLISNFEFS 481
E+F PERF EN + P + + PFG+G R CIG +F + + L ++ +F+F
Sbjct: 372 EEFRPERF--ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|1ZOA|A Chain A, Crystal Structure Of A328v Mutant Of The Heme Domain Of
P450bm-3 With N-Palmitoylglycine
pdb|1ZOA|B Chain B, Crystal Structure Of A328v Mutant Of The Heme Domain Of
P450bm-3 With N-Palmitoylglycine
Length = 473
Score = 111 bits (278), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 92/354 (25%), Positives = 163/354 (46%), Gaps = 34/354 (9%)
Query: 137 WKRLRNKLSPTFTSGKIKYMFPLIKKCSDQLITTIRKQIGESKQMSLEVKDYCARYTTDV 196
WK+ N L P+F+ +K ++ + QL+ + + +EV + R T D
Sbjct: 99 WKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADE---HIEVPEDMTRLTLDT 155
Query: 197 IGSTAFGIEINSLENPDSEFRQVSLLVMKPSVLQMLKAVLSELIPLIKYLNLK--IFDPR 254
IG F NS +R P + M++A L E + ++ N +D
Sbjct: 156 IGLCGFNYRFNSF------YRDQP----HPFITSMVRA-LDEAMNKLQRANPDDPAYDEN 204
Query: 255 ISQF------FSNLVKTNLSYREKNNIKRDDFLNIMMQLQIAQRGKTLSPDDVEMTDDVI 308
QF ++LV ++ R+ + + DD L M+ + + G+ L D+ I
Sbjct: 205 KRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLD-------DENI 257
Query: 309 TAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSY 368
Q F G+ET+S +L+F LY L +NP + K +E A + +Y+ ++ Y
Sbjct: 258 RYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEE-AARVLVDPVPSYKQVKQLKY 316
Query: 369 LDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPEYYPDP-E 427
+ V EALR++P++P + K+ + + L+ G ++ + +H D + D E
Sbjct: 317 VGMVLNEALRLWPTVPAFS-LYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVE 375
Query: 428 KFDPERFSPENIESRPHYTYLPFGDGPRNCIGMRFGTIQFKIGLAQLISNFEFS 481
+F PERF EN + P + + PFG+G R CIG +F + + L ++ +F+F
Sbjct: 376 EFRPERF--ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 427
>pdb|3PSX|A Chain A, Crystal Structure Of The Kt2 Mutant Of Cytochrome P450 Bm3
pdb|3PSX|B Chain B, Crystal Structure Of The Kt2 Mutant Of Cytochrome P450 Bm3
Length = 487
Score = 111 bits (278), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 93/354 (26%), Positives = 162/354 (45%), Gaps = 34/354 (9%)
Query: 137 WKRLRNKLSPTFTSGKIKYMFPLIKKCSDQLITTIRKQIGESKQMSLEVKDYCARYTTDV 196
WK+ N L P+F+ +K ++ + QL+ + + +EV + R T D
Sbjct: 102 WKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADE---HIEVPEDMTRLTLDT 158
Query: 197 IGSTAFGIEINSLENPDSEFRQVSLLVMKPSVLQMLKAVLSELIPLIKYLNLK--IFDPR 254
IG F NS +R P + M++A L E + ++ N +D
Sbjct: 159 IGLCGFNYRFNSF------YRDQP----HPFITSMVRA-LDEAMNKLQRTNPDDPAYDEN 207
Query: 255 ISQF------FSNLVKTNLSYREKNNIKRDDFLNIMMQLQIAQRGKTLSPDDVEMTDDVI 308
QF ++LV ++ R+ + + DD L M+ + + G+ L D+ I
Sbjct: 208 KRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLHGKDPETGEPLD-------DENI 260
Query: 309 TAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSY 368
Q F G+ET+S +L+F LY L +NP + K +E A + +Y+ ++ Y
Sbjct: 261 RYQIVTFLIAGHETTSGLLSFTLYFLVKNPHVLQKAAEE-AARVLVDPVPSYKQVKQLKY 319
Query: 369 LDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPEYYPDP-E 427
+ V EALR++P+ P + K+ + + L+ G +I + +H D + D E
Sbjct: 320 VGMVLNEALRLWPTAPAFS-LYAKEDTVLGGEYPLEKGDEIMVLIPQLHRDKTIWGDDVE 378
Query: 428 KFDPERFSPENIESRPHYTYLPFGDGPRNCIGMRFGTIQFKIGLAQLISNFEFS 481
+F PERF EN + P + + PFG+G R CIG +F + + L ++ +F+F
Sbjct: 379 EFRPERF--ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 430
>pdb|3KX3|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX3|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 111 bits (278), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 95/369 (25%), Positives = 166/369 (44%), Gaps = 42/369 (11%)
Query: 130 FGSKGEY--------WKRLRNKLSPTFTSGKIKYMFPLIKKCSDQLITTIRKQIGESKQM 181
F GE+ WK+ N L P+F+ +K ++ + QL+ + +
Sbjct: 81 FAGDGEFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADE--- 137
Query: 182 SLEVKDYCARYTTDVIGSTAFGIEINSLENPDSEFRQVSLLVMKPSVLQMLKAVLSELIP 241
+EV + R T D IG F NS +R P + M++A L E +
Sbjct: 138 HIEVPEDMTRLTLDTIGLCGFNYRFNSF------YRDQP----HPFITSMVRA-LDEAMN 186
Query: 242 LIKYLNLK--IFDPRISQF------FSNLVKTNLSYREKNNIKRDDFLNIMMQLQIAQRG 293
++ N +D QF ++LV ++ R+ + + DD L M+ + + G
Sbjct: 187 KLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETG 246
Query: 294 KTLSPDDVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKK 353
+ L D+ I Q F G+ET+S +L+F LY L +NP + K +E A
Sbjct: 247 EPLD-------DENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEE-AARVL 298
Query: 354 KEGELTYEICHKMSYLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKISIPT 413
+ +Y+ ++ Y+ V EALR++P+ P + K+ + + L+ G ++ +
Sbjct: 299 VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFS-LYAKEDTVLGGEYPLEKGDELMVLI 357
Query: 414 FAIHYDPEYYPDP-EKFDPERFSPENIESRPHYTYLPFGDGPRNCIGMRFGTIQFKIGLA 472
+H D + D E+F PERF EN + P + + PFG+G R CIG +F + + L
Sbjct: 358 PQLHRDKTIWGDDVEEFRPERF--ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLG 415
Query: 473 QLISNFEFS 481
++ +F+F
Sbjct: 416 MMLKHFDFE 424
>pdb|2UWH|A Chain A, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|B Chain B, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|C Chain C, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|D Chain D, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|E Chain E, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|F Chain F, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
Length = 458
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 92/354 (25%), Positives = 162/354 (45%), Gaps = 34/354 (9%)
Query: 137 WKRLRNKLSPTFTSGKIKYMFPLIKKCSDQLITTIRKQIGESKQMSLEVKDYCARYTTDV 196
WK+ N L P+F+ +K ++ + QL+ + + +EV + R T D
Sbjct: 96 WKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADE---HIEVPEDMTRLTLDT 152
Query: 197 IGSTAFGIEINSLENPDSEFRQVSLLVMKPSVLQMLKAVLSELIPLIKYLNLK--IFDPR 254
IG F NS +R P + M++A L E + ++ N +D
Sbjct: 153 IGLCGFNYRFNSF------YRDQP----HPFITSMVRA-LDEAMNKLQRANPDDPAYDEN 201
Query: 255 ISQF------FSNLVKTNLSYREKNNIKRDDFLNIMMQLQIAQRGKTLSPDDVEMTDDVI 308
QF ++LV ++ R+ + + DD L M+ + + G+ L D+ I
Sbjct: 202 KRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLD-------DENI 254
Query: 309 TAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSY 368
Q F G+ET+S +L+F LY L +NP + K +E A + +Y+ ++ Y
Sbjct: 255 RYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEE-AARVLVDPVPSYKQVKQLKY 313
Query: 369 LDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPEYYPDP-E 427
+ V EALR++P+ P + K+ + + L+ G ++ + +H D + D E
Sbjct: 314 VGMVLNEALRLWPTAPAFS-LYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVE 372
Query: 428 KFDPERFSPENIESRPHYTYLPFGDGPRNCIGMRFGTIQFKIGLAQLISNFEFS 481
+F PERF EN + P + + PFG+G R CIG +F + + L ++ +F+F
Sbjct: 373 EFRPERF--ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|1BVY|A Chain A, Complex Of The Heme And Fmn-Binding Domains Of The
Cytochrome P450(Bm-3)
pdb|1BVY|B Chain B, Complex Of The Heme And Fmn-Binding Domains Of The
Cytochrome P450(Bm-3)
Length = 458
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 92/354 (25%), Positives = 162/354 (45%), Gaps = 34/354 (9%)
Query: 137 WKRLRNKLSPTFTSGKIKYMFPLIKKCSDQLITTIRKQIGESKQMSLEVKDYCARYTTDV 196
WK+ N L P+F+ +K ++ + QL+ + + +EV + R T D
Sbjct: 96 WKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADE---HIEVPEDMTRLTLDT 152
Query: 197 IGSTAFGIEINSLENPDSEFRQVSLLVMKPSVLQMLKAVLSELIPLIKYLNLK--IFDPR 254
IG F NS +R P + M++A L E + ++ N +D
Sbjct: 153 IGLCGFNYRFNSF------YRDQP----HPFITSMVRA-LDEAMNKLQRANPDDPAYDEN 201
Query: 255 ISQF------FSNLVKTNLSYREKNNIKRDDFLNIMMQLQIAQRGKTLSPDDVEMTDDVI 308
QF ++LV ++ R+ + + DD L M+ + + G+ L D+ I
Sbjct: 202 KRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLD-------DENI 254
Query: 309 TAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSY 368
Q F G+ET+S +L+F LY L +NP + K +E A + +Y+ ++ Y
Sbjct: 255 RYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEE-AARVLVDPVPSYKQVKQLKY 313
Query: 369 LDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPEYYPDP-E 427
+ V EALR++P+ P + K+ + + L+ G ++ + +H D + D E
Sbjct: 314 VGMVLNEALRLWPTAPAFS-LYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVE 372
Query: 428 KFDPERFSPENIESRPHYTYLPFGDGPRNCIGMRFGTIQFKIGLAQLISNFEFS 481
+F PERF EN + P + + PFG+G R CIG +F + + L ++ +F+F
Sbjct: 373 EFRPERF--ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|2BMH|A Chain A, Modeling Protein-Substrate Interactions In The Heme Domain
Of Cytochrome P450bm-3
pdb|2BMH|B Chain B, Modeling Protein-Substrate Interactions In The Heme Domain
Of Cytochrome P450bm-3
pdb|1BU7|A Chain A, Cryogenic Structure Of Cytochrome P450bm-3 Heme Domain
pdb|1BU7|B Chain B, Cryogenic Structure Of Cytochrome P450bm-3 Heme Domain
pdb|2J1M|A Chain A, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J1M|B Chain B, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J4S|A Chain A, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J4S|B Chain B, P450 Bm3 Heme Domain In Complex With Dmso
Length = 455
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 92/354 (25%), Positives = 162/354 (45%), Gaps = 34/354 (9%)
Query: 137 WKRLRNKLSPTFTSGKIKYMFPLIKKCSDQLITTIRKQIGESKQMSLEVKDYCARYTTDV 196
WK+ N L P+F+ +K ++ + QL+ + + +EV + R T D
Sbjct: 96 WKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADE---HIEVPEDMTRLTLDT 152
Query: 197 IGSTAFGIEINSLENPDSEFRQVSLLVMKPSVLQMLKAVLSELIPLIKYLNLK--IFDPR 254
IG F NS +R P + M++A L E + ++ N +D
Sbjct: 153 IGLCGFNYRFNSF------YRDQP----HPFITSMVRA-LDEAMNKLQRANPDDPAYDEN 201
Query: 255 ISQF------FSNLVKTNLSYREKNNIKRDDFLNIMMQLQIAQRGKTLSPDDVEMTDDVI 308
QF ++LV ++ R+ + + DD L M+ + + G+ L D+ I
Sbjct: 202 KRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLD-------DENI 254
Query: 309 TAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSY 368
Q F G+ET+S +L+F LY L +NP + K +E A + +Y+ ++ Y
Sbjct: 255 RYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEE-AARVLVDPVPSYKQVKQLKY 313
Query: 369 LDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPEYYPDP-E 427
+ V EALR++P+ P + K+ + + L+ G ++ + +H D + D E
Sbjct: 314 VGMVLNEALRLWPTAPAFS-LYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVE 372
Query: 428 KFDPERFSPENIESRPHYTYLPFGDGPRNCIGMRFGTIQFKIGLAQLISNFEFS 481
+F PERF EN + P + + PFG+G R CIG +F + + L ++ +F+F
Sbjct: 373 EFRPERF--ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|2X7Y|A Chain A, P450 Bm3 F87a In Complex With Dmso
pdb|2X7Y|B Chain B, P450 Bm3 F87a In Complex With Dmso
pdb|2X80|A Chain A, P450 Bm3 F87a In Complex With Dmso
pdb|2X80|B Chain B, P450 Bm3 F87a In Complex With Dmso
Length = 455
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 92/354 (25%), Positives = 162/354 (45%), Gaps = 34/354 (9%)
Query: 137 WKRLRNKLSPTFTSGKIKYMFPLIKKCSDQLITTIRKQIGESKQMSLEVKDYCARYTTDV 196
WK+ N L P+F+ +K ++ + QL+ + + +EV + R T D
Sbjct: 96 WKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADE---HIEVPEDMTRLTLDT 152
Query: 197 IGSTAFGIEINSLENPDSEFRQVSLLVMKPSVLQMLKAVLSELIPLIKYLNLK--IFDPR 254
IG F NS +R P + M++A L E + ++ N +D
Sbjct: 153 IGLCGFNYRFNSF------YRDQP----HPFITSMVRA-LDEAMNKLQRANPDDPAYDEN 201
Query: 255 ISQF------FSNLVKTNLSYREKNNIKRDDFLNIMMQLQIAQRGKTLSPDDVEMTDDVI 308
QF ++LV ++ R+ + + DD L M+ + + G+ L D+ I
Sbjct: 202 KRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLD-------DENI 254
Query: 309 TAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSY 368
Q F G+ET+S +L+F LY L +NP + K +E A + +Y+ ++ Y
Sbjct: 255 RYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEE-AARVLVDPVPSYKQVKQLKY 313
Query: 369 LDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPEYYPDP-E 427
+ V EALR++P+ P + K+ + + L+ G ++ + +H D + D E
Sbjct: 314 VGMVLNEALRLWPTAPAFS-LYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVE 372
Query: 428 KFDPERFSPENIESRPHYTYLPFGDGPRNCIGMRFGTIQFKIGLAQLISNFEFS 481
+F PERF EN + P + + PFG+G R CIG +F + + L ++ +F+F
Sbjct: 373 EFRPERF--ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|3BEN|A Chain A, Structure Of N-(12-Imidazolyl-Dodecanoyl)-L-Leucine
Inhibitor Bound To The Heme Domain Of Cytochrome
P450-Bm3
pdb|3BEN|B Chain B, Structure Of N-(12-Imidazolyl-Dodecanoyl)-L-Leucine
Inhibitor Bound To The Heme Domain Of Cytochrome
P450-Bm3
Length = 470
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 92/354 (25%), Positives = 162/354 (45%), Gaps = 34/354 (9%)
Query: 137 WKRLRNKLSPTFTSGKIKYMFPLIKKCSDQLITTIRKQIGESKQMSLEVKDYCARYTTDV 196
WK+ N L P+F+ +K ++ + QL+ + + +EV + R T D
Sbjct: 97 WKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADE---HIEVPEDMTRLTLDT 153
Query: 197 IGSTAFGIEINSLENPDSEFRQVSLLVMKPSVLQMLKAVLSELIPLIKYLNLK--IFDPR 254
IG F NS +R P + M++A L E + ++ N +D
Sbjct: 154 IGLCGFNYRFNSF------YRDQP----HPFITSMVRA-LDEAMNKLQRANPDDPAYDEN 202
Query: 255 ISQF------FSNLVKTNLSYREKNNIKRDDFLNIMMQLQIAQRGKTLSPDDVEMTDDVI 308
QF ++LV ++ R+ + + DD L M+ + + G+ L D+ I
Sbjct: 203 KRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLD-------DENI 255
Query: 309 TAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSY 368
Q F G+ET+S +L+F LY L +NP + K +E A + +Y+ ++ Y
Sbjct: 256 RYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEE-AARVLVDPVPSYKQVKQLKY 314
Query: 369 LDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPEYYPDP-E 427
+ V EALR++P+ P + K+ + + L+ G ++ + +H D + D E
Sbjct: 315 VGMVLNEALRLWPTAPAFS-LYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVE 373
Query: 428 KFDPERFSPENIESRPHYTYLPFGDGPRNCIGMRFGTIQFKIGLAQLISNFEFS 481
+F PERF EN + P + + PFG+G R CIG +F + + L ++ +F+F
Sbjct: 374 EFRPERF--ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 425
>pdb|1JPZ|A Chain A, Crystal Structure Of A Complex Of The Heme Domain Of
P450bm- 3 With N-Palmitoylglycine
pdb|1JPZ|B Chain B, Crystal Structure Of A Complex Of The Heme Domain Of
P450bm- 3 With N-Palmitoylglycine
pdb|1ZO9|A Chain A, Crystal Structure Of The Wild Type Heme Domain Of P450bm-3
With N- Palmitoylmethionine
pdb|1ZO9|B Chain B, Crystal Structure Of The Wild Type Heme Domain Of P450bm-3
With N- Palmitoylmethionine
Length = 473
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 92/354 (25%), Positives = 162/354 (45%), Gaps = 34/354 (9%)
Query: 137 WKRLRNKLSPTFTSGKIKYMFPLIKKCSDQLITTIRKQIGESKQMSLEVKDYCARYTTDV 196
WK+ N L P+F+ +K ++ + QL+ + + +EV + R T D
Sbjct: 99 WKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADE---HIEVPEDMTRLTLDT 155
Query: 197 IGSTAFGIEINSLENPDSEFRQVSLLVMKPSVLQMLKAVLSELIPLIKYLNLK--IFDPR 254
IG F NS +R P + M++A L E + ++ N +D
Sbjct: 156 IGLCGFNYRFNSF------YRDQP----HPFITSMVRA-LDEAMNKLQRANPDDPAYDEN 204
Query: 255 ISQF------FSNLVKTNLSYREKNNIKRDDFLNIMMQLQIAQRGKTLSPDDVEMTDDVI 308
QF ++LV ++ R+ + + DD L M+ + + G+ L D+ I
Sbjct: 205 KRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLD-------DENI 257
Query: 309 TAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSY 368
Q F G+ET+S +L+F LY L +NP + K +E A + +Y+ ++ Y
Sbjct: 258 RYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEE-AARVLVDPVPSYKQVKQLKY 316
Query: 369 LDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPEYYPDP-E 427
+ V EALR++P+ P + K+ + + L+ G ++ + +H D + D E
Sbjct: 317 VGMVLNEALRLWPTAPAFS-LYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVE 375
Query: 428 KFDPERFSPENIESRPHYTYLPFGDGPRNCIGMRFGTIQFKIGLAQLISNFEFS 481
+F PERF EN + P + + PFG+G R CIG +F + + L ++ +F+F
Sbjct: 376 EFRPERF--ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 427
>pdb|2IJ2|A Chain A, Atomic Structure Of The Heme Domain Of Flavocytochrome
P450- Bm3
pdb|2IJ2|B Chain B, Atomic Structure Of The Heme Domain Of Flavocytochrome
P450- Bm3
Length = 470
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 92/354 (25%), Positives = 162/354 (45%), Gaps = 34/354 (9%)
Query: 137 WKRLRNKLSPTFTSGKIKYMFPLIKKCSDQLITTIRKQIGESKQMSLEVKDYCARYTTDV 196
WK+ N L P+F+ +K ++ + QL+ + + +EV + R T D
Sbjct: 96 WKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADE---HIEVPEDMTRLTLDT 152
Query: 197 IGSTAFGIEINSLENPDSEFRQVSLLVMKPSVLQMLKAVLSELIPLIKYLNLK--IFDPR 254
IG F NS +R P + M++A L E + ++ N +D
Sbjct: 153 IGLCGFNYRFNSF------YRDQP----HPFITSMVRA-LDEAMNKLQRANPDDPAYDEN 201
Query: 255 ISQF------FSNLVKTNLSYREKNNIKRDDFLNIMMQLQIAQRGKTLSPDDVEMTDDVI 308
QF ++LV ++ R+ + + DD L M+ + + G+ L D+ I
Sbjct: 202 KRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLD-------DENI 254
Query: 309 TAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSY 368
Q F G+ET+S +L+F LY L +NP + K +E A + +Y+ ++ Y
Sbjct: 255 RYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEE-AARVLVDPVPSYKQVKQLKY 313
Query: 369 LDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPEYYPDP-E 427
+ V EALR++P+ P + K+ + + L+ G ++ + +H D + D E
Sbjct: 314 VGMVLNEALRLWPTAPAFS-LYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVE 372
Query: 428 KFDPERFSPENIESRPHYTYLPFGDGPRNCIGMRFGTIQFKIGLAQLISNFEFS 481
+F PERF EN + P + + PFG+G R CIG +F + + L ++ +F+F
Sbjct: 373 EFRPERF--ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|2HPD|A Chain A, Crystal Structure Of Hemoprotein Domain Of P450bm-3, A
Prototype For Microsomal P450's
pdb|2HPD|B Chain B, Crystal Structure Of Hemoprotein Domain Of P450bm-3, A
Prototype For Microsomal P450's
pdb|1FAG|A Chain A, Structure Of Cytochrome P450
pdb|1FAG|B Chain B, Structure Of Cytochrome P450
pdb|1FAG|C Chain C, Structure Of Cytochrome P450
pdb|1FAG|D Chain D, Structure Of Cytochrome P450
Length = 471
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 92/354 (25%), Positives = 162/354 (45%), Gaps = 34/354 (9%)
Query: 137 WKRLRNKLSPTFTSGKIKYMFPLIKKCSDQLITTIRKQIGESKQMSLEVKDYCARYTTDV 196
WK+ N L P+F+ +K ++ + QL+ + + +EV + R T D
Sbjct: 96 WKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADE---HIEVPEDMTRLTLDT 152
Query: 197 IGSTAFGIEINSLENPDSEFRQVSLLVMKPSVLQMLKAVLSELIPLIKYLNLK--IFDPR 254
IG F NS +R P + M++A L E + ++ N +D
Sbjct: 153 IGLCGFNYRFNSF------YRDQP----HPFITSMVRA-LDEAMNKLQRANPDDPAYDEN 201
Query: 255 ISQF------FSNLVKTNLSYREKNNIKRDDFLNIMMQLQIAQRGKTLSPDDVEMTDDVI 308
QF ++LV ++ R+ + + DD L M+ + + G+ L D+ I
Sbjct: 202 KRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLD-------DENI 254
Query: 309 TAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSY 368
Q F G+ET+S +L+F LY L +NP + K +E A + +Y+ ++ Y
Sbjct: 255 RYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEE-AARVLVDPVPSYKQVKQLKY 313
Query: 369 LDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPEYYPDP-E 427
+ V EALR++P+ P + K+ + + L+ G ++ + +H D + D E
Sbjct: 314 VGMVLNEALRLWPTAPAFS-LYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVE 372
Query: 428 KFDPERFSPENIESRPHYTYLPFGDGPRNCIGMRFGTIQFKIGLAQLISNFEFS 481
+F PERF EN + P + + PFG+G R CIG +F + + L ++ +F+F
Sbjct: 373 EFRPERF--ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|4DUC|A Chain A, Cytochrome P450 Bm3h-2g9 Mri Sensor, No Ligand
pdb|4DUC|B Chain B, Cytochrome P450 Bm3h-2g9 Mri Sensor, No Ligand
Length = 472
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 96/372 (25%), Positives = 172/372 (46%), Gaps = 36/372 (9%)
Query: 137 WKRLRNKLSPTFTSGKIKYMFPLIKKCSDQLITTIRKQIGESKQMSLEVKDYCARYTTDV 196
WK+ N L P+F+ +K ++ + QL+ + + +EV + R T D
Sbjct: 97 WKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADE---HIEVPEDMTRLTLDT 153
Query: 197 IGSTAFGIEINSLENPDSEFRQVSLLVMKPSVLQMLKAVLSELIPLIKYLNLK--IFDPR 254
IG F NS +R P + M++A L E + ++ N +D
Sbjct: 154 IGLCGFNYRFNSF------YRDQP----HPFITSMVRA-LDEAMNKLQRANPDDPAYDEN 202
Query: 255 ISQF------FSNLVKTNLSYREKNNIKRDDFLNIMMQLQIAQRGKTLSPDDVEMTDDVI 308
QF ++LV ++ R+ + + DD L M+ + + G+ L D+ I
Sbjct: 203 KRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLD-------DENI 255
Query: 309 TAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSY 368
Q F G+E++S +L+F LY L +NP + K +E A + +Y+ ++ Y
Sbjct: 256 RYQIITFLIAGHESTSGLLSFALYFLVKNPHVLQKAAEE-AARVLVDPVPSYKQVKQLKY 314
Query: 369 LDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPEYYPDP-E 427
+ V EALR++P+ P + K+ + + L+ G ++ + +H D + D E
Sbjct: 315 VGMVLNEALRLWPTAPAFS-LYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVE 373
Query: 428 KFDPERFSPENIESRPHYTYLPFGDGPRNCIGMRFGTIQFKIGLAQLISNFEFSIDSANA 487
+F PERF EN + P + + PFG+G R CIG +F + + L ++ +F+F D N
Sbjct: 374 EFRPERF--ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE-DHTNY 430
Query: 488 TFEYLKGSILLQ 499
+ +K ++LL+
Sbjct: 431 ELD-IKETLLLK 441
>pdb|4DUF|A Chain A, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|B Chain B, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|C Chain C, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|D Chain D, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
Length = 471
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 96/372 (25%), Positives = 172/372 (46%), Gaps = 36/372 (9%)
Query: 137 WKRLRNKLSPTFTSGKIKYMFPLIKKCSDQLITTIRKQIGESKQMSLEVKDYCARYTTDV 196
WK+ N L P+F+ +K ++ + QL+ + + +EV + R T D
Sbjct: 96 WKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADE---HIEVPEDMTRLTLDT 152
Query: 197 IGSTAFGIEINSLENPDSEFRQVSLLVMKPSVLQMLKAVLSELIPLIKYLNLK--IFDPR 254
IG F NS +R P + M++A L E + ++ N +D
Sbjct: 153 IGLCGFNYRFNSF------YRDQP----HPFITSMVRA-LDEAMNKLQRANPDDPAYDEN 201
Query: 255 ISQF------FSNLVKTNLSYREKNNIKRDDFLNIMMQLQIAQRGKTLSPDDVEMTDDVI 308
QF ++LV ++ R+ + + DD L M+ + + G+ L D+ I
Sbjct: 202 KRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLD-------DENI 254
Query: 309 TAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSY 368
Q F G+E++S +L+F LY L +NP + K +E A + +Y+ ++ Y
Sbjct: 255 RYQIITFLIAGHESTSGLLSFALYFLVKNPHVLQKAAEE-AARVLVDPVPSYKQVKQLKY 313
Query: 369 LDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPEYYPDP-E 427
+ V EALR++P+ P + K+ + + L+ G ++ + +H D + D E
Sbjct: 314 VGMVLNEALRLWPTAPAFS-LYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVE 372
Query: 428 KFDPERFSPENIESRPHYTYLPFGDGPRNCIGMRFGTIQFKIGLAQLISNFEFSIDSANA 487
+F PERF EN + P + + PFG+G R CIG +F + + L ++ +F+F D N
Sbjct: 373 EFRPERF--ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE-DHTNY 429
Query: 488 TFEYLKGSILLQ 499
+ +K ++LL+
Sbjct: 430 ELD-IKETLLLK 440
>pdb|3M4V|A Chain A, Crystal Structure Of The A330p Mutant Of Cytochrome P450
Bm3
pdb|3M4V|B Chain B, Crystal Structure Of The A330p Mutant Of Cytochrome P450
Bm3
Length = 482
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 92/354 (25%), Positives = 162/354 (45%), Gaps = 34/354 (9%)
Query: 137 WKRLRNKLSPTFTSGKIKYMFPLIKKCSDQLITTIRKQIGESKQMSLEVKDYCARYTTDV 196
WK+ N L P+F+ +K ++ + QL+ + + +EV + R T D
Sbjct: 97 WKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADE---HIEVPEDMTRLTLDT 153
Query: 197 IGSTAFGIEINSLENPDSEFRQVSLLVMKPSVLQMLKAVLSELIPLIKYLNLK--IFDPR 254
IG F NS +R P + M++A L E + ++ N +D
Sbjct: 154 IGLCGFNYRFNSF------YRDQP----HPFITSMVRA-LDEAMNKLQRANPDDPAYDEN 202
Query: 255 ISQF------FSNLVKTNLSYREKNNIKRDDFLNIMMQLQIAQRGKTLSPDDVEMTDDVI 308
QF ++LV ++ R+ + + DD L M+ + + G+ L D+ I
Sbjct: 203 KRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLD-------DENI 255
Query: 309 TAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSY 368
Q F G+ET+S +L+F LY L +NP + K +E A + +Y+ ++ Y
Sbjct: 256 RYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEE-AARVLVDPVPSYKQVKQLKY 314
Query: 369 LDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPEYYPDP-E 427
+ V EALR++P+ P + K+ + + L+ G ++ + +H D + D E
Sbjct: 315 VGMVLNEALRLWPTAPPFS-LYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVE 373
Query: 428 KFDPERFSPENIESRPHYTYLPFGDGPRNCIGMRFGTIQFKIGLAQLISNFEFS 481
+F PERF EN + P + + PFG+G R CIG +F + + L ++ +F+F
Sbjct: 374 EFRPERF--ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 425
>pdb|2NNB|A Chain A, The Q403k Mutnat Heme Domain Of Flavocytochrome P450 Bm3
pdb|2NNB|B Chain B, The Q403k Mutnat Heme Domain Of Flavocytochrome P450 Bm3
Length = 471
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 92/354 (25%), Positives = 162/354 (45%), Gaps = 34/354 (9%)
Query: 137 WKRLRNKLSPTFTSGKIKYMFPLIKKCSDQLITTIRKQIGESKQMSLEVKDYCARYTTDV 196
WK+ N L P+F+ +K ++ + QL+ + + +EV + R T D
Sbjct: 96 WKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADE---HIEVPEDMTRLTLDT 152
Query: 197 IGSTAFGIEINSLENPDSEFRQVSLLVMKPSVLQMLKAVLSELIPLIKYLNLK--IFDPR 254
IG F NS +R P + M++A L E + ++ N +D
Sbjct: 153 IGLCGFNYRFNSF------YRDQP----HPFITSMVRA-LDEAMNKLQRANPDDPAYDEN 201
Query: 255 ISQF------FSNLVKTNLSYREKNNIKRDDFLNIMMQLQIAQRGKTLSPDDVEMTDDVI 308
QF ++LV ++ R+ + + DD L M+ + + G+ L D+ I
Sbjct: 202 KRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLD-------DENI 254
Query: 309 TAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSY 368
Q F G+ET+S +L+F LY L +NP + K +E A + +Y+ ++ Y
Sbjct: 255 RYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEE-AARVLVDPVPSYKQVKQLKY 313
Query: 369 LDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPEYYPDP-E 427
+ V EALR++P+ P + K+ + + L+ G ++ + +H D + D E
Sbjct: 314 VGMVLNEALRLWPTAPAFS-LYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVE 372
Query: 428 KFDPERFSPENIESRPHYTYLPFGDGPRNCIGMRFGTIQFKIGLAQLISNFEFS 481
+F PERF EN + P + + PFG+G R CIG +F + + L ++ +F+F
Sbjct: 373 EFRPERF--ENPSAIPQHAFKPFGNGQRACIGKQFALHEATLVLGMMLKHFDFE 424
>pdb|1ZO4|A Chain A, Crystal Structure Of A328s Mutant Of The Heme Domain Of
P450bm-3
pdb|1ZO4|B Chain B, Crystal Structure Of A328s Mutant Of The Heme Domain Of
P450bm-3
Length = 473
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 92/354 (25%), Positives = 162/354 (45%), Gaps = 34/354 (9%)
Query: 137 WKRLRNKLSPTFTSGKIKYMFPLIKKCSDQLITTIRKQIGESKQMSLEVKDYCARYTTDV 196
WK+ N L P+F+ +K ++ + QL+ + + +EV + R T D
Sbjct: 99 WKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADE---HIEVPEDMTRLTLDT 155
Query: 197 IGSTAFGIEINSLENPDSEFRQVSLLVMKPSVLQMLKAVLSELIPLIKYLNLK--IFDPR 254
IG F NS +R P + M++A L E + ++ N +D
Sbjct: 156 IGLCGFNYRFNSF------YRDQP----HPFITSMVRA-LDEAMNKLQRANPDDPAYDEN 204
Query: 255 ISQF------FSNLVKTNLSYREKNNIKRDDFLNIMMQLQIAQRGKTLSPDDVEMTDDVI 308
QF ++LV ++ R+ + + DD L M+ + + G+ L D+ I
Sbjct: 205 KRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLD-------DENI 257
Query: 309 TAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSY 368
Q F G+ET+S +L+F LY L +NP + K +E A + +Y+ ++ Y
Sbjct: 258 RYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEE-AARVLVDPVPSYKQVKQLKY 316
Query: 369 LDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPEYYPDP-E 427
+ V EALR++P+ P + K+ + + L+ G ++ + +H D + D E
Sbjct: 317 VGMVLNEALRLWPTSPAFS-LYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVE 375
Query: 428 KFDPERFSPENIESRPHYTYLPFGDGPRNCIGMRFGTIQFKIGLAQLISNFEFS 481
+F PERF EN + P + + PFG+G R CIG +F + + L ++ +F+F
Sbjct: 376 EFRPERF--ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 427
>pdb|2IJ3|A Chain A, Structure Of The A264h Mutant Of Cytochrome P450 Bm3
pdb|2IJ3|B Chain B, Structure Of The A264h Mutant Of Cytochrome P450 Bm3
Length = 470
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 92/354 (25%), Positives = 162/354 (45%), Gaps = 34/354 (9%)
Query: 137 WKRLRNKLSPTFTSGKIKYMFPLIKKCSDQLITTIRKQIGESKQMSLEVKDYCARYTTDV 196
WK+ N L P+F+ +K ++ + QL+ + + +EV + R T D
Sbjct: 96 WKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADE---HIEVPEDMTRLTLDT 152
Query: 197 IGSTAFGIEINSLENPDSEFRQVSLLVMKPSVLQMLKAVLSELIPLIKYLNLK--IFDPR 254
IG F NS +R P + M++A L E + ++ N +D
Sbjct: 153 IGLCGFNYRFNSF------YRDQP----HPFITSMVRA-LDEAMNKLQRANPDDPAYDEN 201
Query: 255 ISQF------FSNLVKTNLSYREKNNIKRDDFLNIMMQLQIAQRGKTLSPDDVEMTDDVI 308
QF ++LV ++ R+ + + DD L M+ + + G+ L D+ I
Sbjct: 202 KRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLD-------DENI 254
Query: 309 TAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSY 368
Q F G+ET+S +L+F LY L +NP + K +E A + +Y+ ++ Y
Sbjct: 255 RYQIITFLIHGHETTSGLLSFALYFLVKNPHVLQKAAEE-AARVLVDPVPSYKQVKQLKY 313
Query: 369 LDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPEYYPDP-E 427
+ V EALR++P+ P + K+ + + L+ G ++ + +H D + D E
Sbjct: 314 VGMVLNEALRLWPTAPAFS-LYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVE 372
Query: 428 KFDPERFSPENIESRPHYTYLPFGDGPRNCIGMRFGTIQFKIGLAQLISNFEFS 481
+F PERF EN + P + + PFG+G R CIG +F + + L ++ +F+F
Sbjct: 373 EFRPERF--ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|2IJ4|A Chain A, Structure Of The A264k Mutant Of Cytochrome P450 Bm3
pdb|2IJ4|B Chain B, Structure Of The A264k Mutant Of Cytochrome P450 Bm3
Length = 470
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 92/354 (25%), Positives = 162/354 (45%), Gaps = 34/354 (9%)
Query: 137 WKRLRNKLSPTFTSGKIKYMFPLIKKCSDQLITTIRKQIGESKQMSLEVKDYCARYTTDV 196
WK+ N L P+F+ +K ++ + QL+ + + +EV + R T D
Sbjct: 96 WKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADE---HIEVPEDMTRLTLDT 152
Query: 197 IGSTAFGIEINSLENPDSEFRQVSLLVMKPSVLQMLKAVLSELIPLIKYLNLK--IFDPR 254
IG F NS +R P + M++A L E + ++ N +D
Sbjct: 153 IGLCGFNYRFNSF------YRDQP----HPFITSMVRA-LDEAMNKLQRANPDDPAYDEN 201
Query: 255 ISQF------FSNLVKTNLSYREKNNIKRDDFLNIMMQLQIAQRGKTLSPDDVEMTDDVI 308
QF ++LV ++ R+ + + DD L M+ + + G+ L D+ I
Sbjct: 202 KRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLD-------DENI 254
Query: 309 TAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSY 368
Q F G+ET+S +L+F LY L +NP + K +E A + +Y+ ++ Y
Sbjct: 255 RYQIITFLIKGHETTSGLLSFALYFLVKNPHVLQKAAEE-AARVLVDPVPSYKQVKQLKY 313
Query: 369 LDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPEYYPDP-E 427
+ V EALR++P+ P + K+ + + L+ G ++ + +H D + D E
Sbjct: 314 VGMVLNEALRLWPTAPAFS-LYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVE 372
Query: 428 KFDPERFSPENIESRPHYTYLPFGDGPRNCIGMRFGTIQFKIGLAQLISNFEFS 481
+F PERF EN + P + + PFG+G R CIG +F + + L ++ +F+F
Sbjct: 373 EFRPERF--ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|1P0X|A Chain A, F393y Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0X|B Chain B, F393y Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 91/354 (25%), Positives = 162/354 (45%), Gaps = 34/354 (9%)
Query: 137 WKRLRNKLSPTFTSGKIKYMFPLIKKCSDQLITTIRKQIGESKQMSLEVKDYCARYTTDV 196
WK+ N L P+F+ +K ++ + QL+ + + +EV + R T D
Sbjct: 96 WKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADE---HIEVPEDMTRLTLDT 152
Query: 197 IGSTAFGIEINSLENPDSEFRQVSLLVMKPSVLQMLKAVLSELIPLIKYLNLK--IFDPR 254
IG F NS +R P + M++A L E + ++ N +D
Sbjct: 153 IGLCGFNYRFNSF------YRDQP----HPFITSMVRA-LDEAMNKLQRANPDDPAYDEN 201
Query: 255 ISQF------FSNLVKTNLSYREKNNIKRDDFLNIMMQLQIAQRGKTLSPDDVEMTDDVI 308
QF ++LV ++ R+ + + DD L M+ + + G+ L D+ I
Sbjct: 202 KRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLD-------DENI 254
Query: 309 TAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSY 368
Q F G+ET+S +L+F LY L +NP + K +E A + +Y+ ++ Y
Sbjct: 255 RYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEE-AARVLVDPVPSYKQVKQLKY 313
Query: 369 LDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPEYYPDP-E 427
+ V EALR++P+ P + K+ + + L+ G ++ + +H D + D E
Sbjct: 314 VGMVLNEALRLWPTAPAFS-LYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVE 372
Query: 428 KFDPERFSPENIESRPHYTYLPFGDGPRNCIGMRFGTIQFKIGLAQLISNFEFS 481
+F PERF EN + P + + P+G+G R CIG +F + + L ++ +F+F
Sbjct: 373 EFRPERF--ENPSAIPQHAFKPYGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|4DUD|A Chain A, Cytochrome P450 Bm3h-2g9c6 Mri Sensor, No Ligand
pdb|4DUD|B Chain B, Cytochrome P450 Bm3h-2g9c6 Mri Sensor, No Ligand
pdb|4DUE|A Chain A, Cytochrome P450 Bm3h-2g9c6 Mri Sensor Bound To Serotonin
pdb|4DUE|B Chain B, Cytochrome P450 Bm3h-2g9c6 Mri Sensor Bound To Serotonin
Length = 471
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 91/354 (25%), Positives = 162/354 (45%), Gaps = 34/354 (9%)
Query: 137 WKRLRNKLSPTFTSGKIKYMFPLIKKCSDQLITTIRKQIGESKQMSLEVKDYCARYTTDV 196
WK+ N L P+F+ +K ++ + QL+ + + +EV + R T D
Sbjct: 96 WKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADE---HIEVPEDMTRLTLDT 152
Query: 197 IGSTAFGIEINSLENPDSEFRQVSLLVMKPSVLQMLKAVLSELIPLIKYLNLK--IFDPR 254
IG F NS +R P + M++A L E + ++ N +D
Sbjct: 153 IGLCGFNYRFNSF------YRDQP----HPFITSMVRA-LDEAMNKLQRANPDDPAYDEN 201
Query: 255 ISQF------FSNLVKTNLSYREKNNIKRDDFLNIMMQLQIAQRGKTLSPDDVEMTDDVI 308
QF ++LV ++ R+ + + DD L M+ + + G+ L D+ I
Sbjct: 202 KRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLD-------DENI 254
Query: 309 TAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSY 368
Q F G+E++S +L+F LY L +NP + K +E A + +Y+ ++ Y
Sbjct: 255 RYQIITFLIAGHESTSGLLSFALYFLVKNPHVLQKAAEE-AARVLVDPVPSYKQVKQLKY 313
Query: 369 LDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPEYYPDP-E 427
+ V EALR++P+ P + K+ + + L+ G ++ + +H D + D E
Sbjct: 314 VGMVLNEALRLWPTAPAFS-LYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVE 372
Query: 428 KFDPERFSPENIESRPHYTYLPFGDGPRNCIGMRFGTIQFKIGLAQLISNFEFS 481
+F PERF EN + P + + PFG+G R CIG +F + + L ++ +F+F
Sbjct: 373 EFRPERF--ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|3EKB|A Chain A, Crystal Structure Of The A264c Mutant Heme Domain Of
Cytochrome P450 Bm3
pdb|3EKB|B Chain B, Crystal Structure Of The A264c Mutant Heme Domain Of
Cytochrome P450 Bm3
Length = 470
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 92/354 (25%), Positives = 162/354 (45%), Gaps = 34/354 (9%)
Query: 137 WKRLRNKLSPTFTSGKIKYMFPLIKKCSDQLITTIRKQIGESKQMSLEVKDYCARYTTDV 196
WK+ N L P+F+ +K ++ + QL+ + + +EV + R T D
Sbjct: 96 WKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADE---HIEVPEDMTRLTLDT 152
Query: 197 IGSTAFGIEINSLENPDSEFRQVSLLVMKPSVLQMLKAVLSELIPLIKYLNLK--IFDPR 254
IG F NS +R P + M++A L E + ++ N +D
Sbjct: 153 IGLCGFNYRFNSF------YRDQP----HPFITSMVRA-LDEAMNKLQRANPDDPAYDEN 201
Query: 255 ISQF------FSNLVKTNLSYREKNNIKRDDFLNIMMQLQIAQRGKTLSPDDVEMTDDVI 308
QF ++LV ++ R+ + + DD L M+ + + G+ L D+ I
Sbjct: 202 KRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLD-------DENI 254
Query: 309 TAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSY 368
Q F G+ET+S +L+F LY L +NP + K +E A + +Y+ ++ Y
Sbjct: 255 RYQIITFLICGHETTSGLLSFALYFLVKNPHVLQKAAEE-AARVLVDPVPSYKQVKQLKY 313
Query: 369 LDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPEYYPDP-E 427
+ V EALR++P+ P + K+ + + L+ G ++ + +H D + D E
Sbjct: 314 VGMVLNEALRLWPTAPAFS-LYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVE 372
Query: 428 KFDPERFSPENIESRPHYTYLPFGDGPRNCIGMRFGTIQFKIGLAQLISNFEFS 481
+F PERF EN + P + + PFG+G R CIG +F + + L ++ +F+F
Sbjct: 373 EFRPERF--ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|3EKF|A Chain A, Crystal Structure Of The A264q Heme Domain Of Cytochrome
P450 Bm3
pdb|3EKF|B Chain B, Crystal Structure Of The A264q Heme Domain Of Cytochrome
P450 Bm3
Length = 470
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 92/354 (25%), Positives = 162/354 (45%), Gaps = 34/354 (9%)
Query: 137 WKRLRNKLSPTFTSGKIKYMFPLIKKCSDQLITTIRKQIGESKQMSLEVKDYCARYTTDV 196
WK+ N L P+F+ +K ++ + QL+ + + +EV + R T D
Sbjct: 96 WKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADE---HIEVPEDMTRLTLDT 152
Query: 197 IGSTAFGIEINSLENPDSEFRQVSLLVMKPSVLQMLKAVLSELIPLIKYLNLK--IFDPR 254
IG F NS +R P + M++A L E + ++ N +D
Sbjct: 153 IGLCGFNYRFNSF------YRDQP----HPFITSMVRA-LDEAMNKLQRANPDDPAYDEN 201
Query: 255 ISQF------FSNLVKTNLSYREKNNIKRDDFLNIMMQLQIAQRGKTLSPDDVEMTDDVI 308
QF ++LV ++ R+ + + DD L M+ + + G+ L D+ I
Sbjct: 202 KRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLD-------DENI 254
Query: 309 TAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSY 368
Q F G+ET+S +L+F LY L +NP + K +E A + +Y+ ++ Y
Sbjct: 255 RYQIITFLIQGHETTSGLLSFALYFLVKNPHVLQKAAEE-AARVLVDPVPSYKQVKQLKY 313
Query: 369 LDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPEYYPDP-E 427
+ V EALR++P+ P + K+ + + L+ G ++ + +H D + D E
Sbjct: 314 VGMVLNEALRLWPTAPAFS-LYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVE 372
Query: 428 KFDPERFSPENIESRPHYTYLPFGDGPRNCIGMRFGTIQFKIGLAQLISNFEFS 481
+F PERF EN + P + + PFG+G R CIG +F + + L ++ +F+F
Sbjct: 373 EFRPERF--ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|1P0W|A Chain A, F393w Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0W|B Chain B, F393w Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 91/354 (25%), Positives = 162/354 (45%), Gaps = 34/354 (9%)
Query: 137 WKRLRNKLSPTFTSGKIKYMFPLIKKCSDQLITTIRKQIGESKQMSLEVKDYCARYTTDV 196
WK+ N L P+F+ +K ++ + QL+ + + +EV + R T D
Sbjct: 96 WKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADE---HIEVPEDMTRLTLDT 152
Query: 197 IGSTAFGIEINSLENPDSEFRQVSLLVMKPSVLQMLKAVLSELIPLIKYLNLK--IFDPR 254
IG F NS +R P + M++A L E + ++ N +D
Sbjct: 153 IGLCGFNYRFNSF------YRDQP----HPFITSMVRA-LDEAMNKLQRANPDDPAYDEN 201
Query: 255 ISQF------FSNLVKTNLSYREKNNIKRDDFLNIMMQLQIAQRGKTLSPDDVEMTDDVI 308
QF ++LV ++ R+ + + DD L M+ + + G+ L D+ I
Sbjct: 202 KRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLD-------DENI 254
Query: 309 TAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSY 368
Q F G+ET+S +L+F LY L +NP + K +E A + +Y+ ++ Y
Sbjct: 255 RYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEE-AARVLVDPVPSYKQVKQLKY 313
Query: 369 LDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPEYYPDP-E 427
+ V EALR++P+ P + K+ + + L+ G ++ + +H D + D E
Sbjct: 314 VGMVLNEALRLWPTAPAFS-LYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVE 372
Query: 428 KFDPERFSPENIESRPHYTYLPFGDGPRNCIGMRFGTIQFKIGLAQLISNFEFS 481
+F PERF EN + P + + P+G+G R CIG +F + + L ++ +F+F
Sbjct: 373 EFRPERF--ENPSAIPQHAFKPWGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|2VE3|A Chain A, Retinoic Acid Bound Cyanobacterial Cyp120a1
pdb|2VE3|B Chain B, Retinoic Acid Bound Cyanobacterial Cyp120a1
pdb|2VE4|A Chain A, Substrate Free Cyanobacterial Cyp120a1
pdb|2VE4|B Chain B, Substrate Free Cyanobacterial Cyp120a1
Length = 444
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 70/219 (31%), Positives = 115/219 (52%), Gaps = 16/219 (7%)
Query: 267 LSYREKNNIKRDDFLNIMMQLQIAQRGKTLSPDDV-EMTDDVITAQSFVFFFGGYETSSS 325
+ R++ +D L I++ A R P + E+ D ++ + F G+ET +S
Sbjct: 211 IKARQQQPPSEEDALGILL----AARDDNNQPLSLPELKDQIL-----LLLFAGHETLTS 261
Query: 326 VLT-FCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSYLDKVTKEALRMYPSLP 384
L+ FCL L ++ DI+ ++RQE + + ELT E KM YLD+V +E LR+ P +
Sbjct: 262 ALSSFCLL-LGQHSDIRERVRQEQNKLQLSQ-ELTAETLKKMPYLDQVLQEVLRLIPPVG 319
Query: 385 QLDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPEYYPDPEKFDPERFSPENIESR-P 443
R ++ + G +S H DP+ YPDPEKFDPERF+P+ + P
Sbjct: 320 GGFRELIQDCQF--QGFHFPKGWLVSYQISQTHADPDLYPDPEKFDPERFTPDGSATHNP 377
Query: 444 HYTYLPFGDGPRNCIGMRFGTIQFKIGLAQLISNFEFSI 482
+ ++PFG G R C+G F ++ K+ +LI F++++
Sbjct: 378 PFAHVPFGGGLRECLGKEFARLEMKLFATRLIQQFDWTL 416
>pdb|1SMI|A Chain A, A Single Mutation Of P450 Bm3 Induces The Conformational
Rearrangement Seen Upon Substrate-Binding In Wild-Type
Enzyme
pdb|1SMI|B Chain B, A Single Mutation Of P450 Bm3 Induces The Conformational
Rearrangement Seen Upon Substrate-Binding In Wild-Type
Enzyme
pdb|1SMJ|A Chain A, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|B Chain B, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|C Chain C, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|D Chain D, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
Length = 471
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 92/354 (25%), Positives = 162/354 (45%), Gaps = 34/354 (9%)
Query: 137 WKRLRNKLSPTFTSGKIKYMFPLIKKCSDQLITTIRKQIGESKQMSLEVKDYCARYTTDV 196
WK+ N L P+F+ +K ++ + QL+ + + +EV + R T D
Sbjct: 96 WKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADE---HIEVPEDMTRLTLDT 152
Query: 197 IGSTAFGIEINSLENPDSEFRQVSLLVMKPSVLQMLKAVLSELIPLIKYLNLK--IFDPR 254
IG F NS +R P + M++A L E + ++ N +D
Sbjct: 153 IGLCGFNYRFNSF------YRDQP----HPFITSMVRA-LDEAMNKLQRANPDDPAYDEN 201
Query: 255 ISQF------FSNLVKTNLSYREKNNIKRDDFLNIMMQLQIAQRGKTLSPDDVEMTDDVI 308
QF ++LV ++ R+ + + DD L M+ + + G+ L D+ I
Sbjct: 202 KRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLD-------DENI 254
Query: 309 TAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSY 368
Q F G+ET+S +L+F LY L +NP + K +E A + +Y+ ++ Y
Sbjct: 255 RYQIITFLIEGHETTSGLLSFALYFLVKNPHVLQKAAEE-AARVLVDPVPSYKQVKQLKY 313
Query: 369 LDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPEYYPDP-E 427
+ V EALR++P+ P + K+ + + L+ G ++ + +H D + D E
Sbjct: 314 VGMVLNEALRLWPTAPAFS-LYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVE 372
Query: 428 KFDPERFSPENIESRPHYTYLPFGDGPRNCIGMRFGTIQFKIGLAQLISNFEFS 481
+F PERF EN + P + + PFG+G R CIG +F + + L ++ +F+F
Sbjct: 373 EFRPERF--ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|3EKD|A Chain A, Crystal Structure Of The A264m Heme Domain Of Cytochrome
P450 Bm3
pdb|3EKD|B Chain B, Crystal Structure Of The A264m Heme Domain Of Cytochrome
P450 Bm3
Length = 470
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 92/354 (25%), Positives = 162/354 (45%), Gaps = 34/354 (9%)
Query: 137 WKRLRNKLSPTFTSGKIKYMFPLIKKCSDQLITTIRKQIGESKQMSLEVKDYCARYTTDV 196
WK+ N L P+F+ +K ++ + QL+ + + +EV + R T D
Sbjct: 96 WKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADE---HIEVPEDMTRLTLDT 152
Query: 197 IGSTAFGIEINSLENPDSEFRQVSLLVMKPSVLQMLKAVLSELIPLIKYLNLK--IFDPR 254
IG F NS +R P + M++A L E + ++ N +D
Sbjct: 153 IGLCGFNYRFNSF------YRDQP----HPFITSMVRA-LDEAMNKLQRANPDDPAYDEN 201
Query: 255 ISQF------FSNLVKTNLSYREKNNIKRDDFLNIMMQLQIAQRGKTLSPDDVEMTDDVI 308
QF ++LV ++ R+ + + DD L M+ + + G+ L D+ I
Sbjct: 202 KRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLD-------DENI 254
Query: 309 TAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSY 368
Q F G+ET+S +L+F LY L +NP + K +E A + +Y+ ++ Y
Sbjct: 255 RYQIITFLIMGHETTSGLLSFALYFLVKNPHVLQKAAEE-AARVLVDPVPSYKQVKQLKY 313
Query: 369 LDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPEYYPDP-E 427
+ V EALR++P+ P + K+ + + L+ G ++ + +H D + D E
Sbjct: 314 VGMVLNEALRLWPTAPAFS-LYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVE 372
Query: 428 KFDPERFSPENIESRPHYTYLPFGDGPRNCIGMRFGTIQFKIGLAQLISNFEFS 481
+F PERF EN + P + + PFG+G R CIG +F + + L ++ +F+F
Sbjct: 373 EFRPERF--ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|1YQO|A Chain A, T268a Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1YQO|B Chain B, T268a Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 91/354 (25%), Positives = 161/354 (45%), Gaps = 34/354 (9%)
Query: 137 WKRLRNKLSPTFTSGKIKYMFPLIKKCSDQLITTIRKQIGESKQMSLEVKDYCARYTTDV 196
WK+ N L P+F+ +K ++ + QL+ + + +EV + R T D
Sbjct: 96 WKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADE---HIEVPEDMTRLTLDT 152
Query: 197 IGSTAFGIEINSLENPDSEFRQVSLLVMKPSVLQMLKAVLSELIPLIKYLNLK--IFDPR 254
IG F NS +R P + M++A L E + ++ N +D
Sbjct: 153 IGLCGFNYRFNSF------YRDQP----HPFITSMVRA-LDEAMNKLQRANPDDPAYDEN 201
Query: 255 ISQF------FSNLVKTNLSYREKNNIKRDDFLNIMMQLQIAQRGKTLSPDDVEMTDDVI 308
QF ++LV ++ R+ + + DD L M+ + + G+ L D+ I
Sbjct: 202 KRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLD-------DENI 254
Query: 309 TAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSY 368
Q F G+E +S +L+F LY L +NP + K +E A + +Y+ ++ Y
Sbjct: 255 RYQIITFLIAGHEATSGLLSFALYFLVKNPHVLQKAAEE-AARVLVDPVPSYKQVKQLKY 313
Query: 369 LDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPEYYPDP-E 427
+ V EALR++P+ P + K+ + + L+ G ++ + +H D + D E
Sbjct: 314 VGMVLNEALRLWPTAPAFS-LYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVE 372
Query: 428 KFDPERFSPENIESRPHYTYLPFGDGPRNCIGMRFGTIQFKIGLAQLISNFEFS 481
+F PERF EN + P + + PFG+G R CIG +F + + L ++ +F+F
Sbjct: 373 EFRPERF--ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|3DGI|A Chain A, Crystal Structure Of F87aT268A MUTANT OF CYP BM3
pdb|3DGI|B Chain B, Crystal Structure Of F87aT268A MUTANT OF CYP BM3
Length = 461
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 91/354 (25%), Positives = 161/354 (45%), Gaps = 34/354 (9%)
Query: 137 WKRLRNKLSPTFTSGKIKYMFPLIKKCSDQLITTIRKQIGESKQMSLEVKDYCARYTTDV 196
WK+ N L P+F+ +K ++ + QL+ + + +EV + R T D
Sbjct: 96 WKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADE---HIEVPEDMTRLTLDT 152
Query: 197 IGSTAFGIEINSLENPDSEFRQVSLLVMKPSVLQMLKAVLSELIPLIKYLNLK--IFDPR 254
IG F NS +R P + M++A L E + ++ N +D
Sbjct: 153 IGLCGFNYRFNSF------YRDQP----HPFITSMVRA-LDEAMNKLQRANPDDPAYDEN 201
Query: 255 ISQF------FSNLVKTNLSYREKNNIKRDDFLNIMMQLQIAQRGKTLSPDDVEMTDDVI 308
QF ++LV ++ R+ + + DD L M+ + + G+ L D+ I
Sbjct: 202 KRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLD-------DENI 254
Query: 309 TAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSY 368
Q F G+E +S +L+F LY L +NP + K +E A + +Y+ ++ Y
Sbjct: 255 RYQIITFLIAGHEATSGLLSFALYFLVKNPHVLQKAAEE-AARVLVDPVPSYKQVKQLKY 313
Query: 369 LDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPEYYPDP-E 427
+ V EALR++P+ P + K+ + + L+ G ++ + +H D + D E
Sbjct: 314 VGMVLNEALRLWPTAPAFS-LYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVE 372
Query: 428 KFDPERFSPENIESRPHYTYLPFGDGPRNCIGMRFGTIQFKIGLAQLISNFEFS 481
+F PERF EN + P + + PFG+G R CIG +F + + L ++ +F+F
Sbjct: 373 EFRPERF--ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|1YQP|A Chain A, T268n Mutant Cytochrome Domain Of Flavocytochrome P450 Bm3
pdb|1YQP|B Chain B, T268n Mutant Cytochrome Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 91/354 (25%), Positives = 161/354 (45%), Gaps = 34/354 (9%)
Query: 137 WKRLRNKLSPTFTSGKIKYMFPLIKKCSDQLITTIRKQIGESKQMSLEVKDYCARYTTDV 196
WK+ N L P+F+ +K ++ + QL+ + + +EV + R T D
Sbjct: 96 WKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADE---HIEVPEDMTRLTLDT 152
Query: 197 IGSTAFGIEINSLENPDSEFRQVSLLVMKPSVLQMLKAVLSELIPLIKYLNLK--IFDPR 254
IG F NS +R P + M++A L E + ++ N +D
Sbjct: 153 IGLCGFNYRFNSF------YRDQP----HPFITSMVRA-LDEAMNKLQRANPDDPAYDEN 201
Query: 255 ISQF------FSNLVKTNLSYREKNNIKRDDFLNIMMQLQIAQRGKTLSPDDVEMTDDVI 308
QF ++LV ++ R+ + + DD L M+ + + G+ L D+ I
Sbjct: 202 KRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLD-------DENI 254
Query: 309 TAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSY 368
Q F G+E +S +L+F LY L +NP + K +E A + +Y+ ++ Y
Sbjct: 255 RYQIITFLIAGHENTSGLLSFALYFLVKNPHVLQKAAEE-AARVLVDPVPSYKQVKQLKY 313
Query: 369 LDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPEYYPDP-E 427
+ V EALR++P+ P + K+ + + L+ G ++ + +H D + D E
Sbjct: 314 VGMVLNEALRLWPTAPAFS-LYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVE 372
Query: 428 KFDPERFSPENIESRPHYTYLPFGDGPRNCIGMRFGTIQFKIGLAQLISNFEFS 481
+F PERF EN + P + + PFG+G R CIG +F + + L ++ +F+F
Sbjct: 373 EFRPERF--ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|3NPL|A Chain A, Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme Domain,
A Ruthenium Modified P450 Bm3 Mutant
pdb|3NPL|B Chain B, Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme Domain,
A Ruthenium Modified P450 Bm3 Mutant
Length = 470
Score = 108 bits (271), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 91/354 (25%), Positives = 162/354 (45%), Gaps = 34/354 (9%)
Query: 137 WKRLRNKLSPTFTSGKIKYMFPLIKKCSDQLITTIRKQIGESKQMSLEVKDYCARYTTDV 196
W + N L P+F+ +K ++ + QL+ + + +EV + R T D
Sbjct: 97 WCKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADE---HIEVPEDMTRLTLDT 153
Query: 197 IGSTAFGIEINSLENPDSEFRQVSLLVMKPSVLQMLKAVLSELIPLIKYLNLK--IFDPR 254
IG + F NS +R P + M++A L E + ++ N +D
Sbjct: 154 IGLSGFNYRFNSF------YRDQP----HPFITSMVRA-LDEAMNKLQRANPDDPAYDEN 202
Query: 255 ISQF------FSNLVKTNLSYREKNNIKRDDFLNIMMQLQIAQRGKTLSPDDVEMTDDVI 308
QF ++LV ++ R+ + + DD L M+ + + G+ L D+ I
Sbjct: 203 KRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLD-------DENI 255
Query: 309 TAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSY 368
Q F G+ET+S +L+F LY L +NP + K +E A + +Y+ ++ Y
Sbjct: 256 RYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEE-AARVLVDPVPSYKQVKQLKY 314
Query: 369 LDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPEYYPDP-E 427
+ V EALR++P+ P + K+ + + L+ G ++ + +H D + D E
Sbjct: 315 VGMVLNEALRLWPTAPAFS-LYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVE 373
Query: 428 KFDPERFSPENIESRPHYTYLPFGDGPRNCIGMRFGTIQFKIGLAQLISNFEFS 481
+F PERF EN + P + + PFG+G R CIG +F + + L ++ +F+F
Sbjct: 374 EFRPERF--ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 425
>pdb|1FAH|A Chain A, Structure Of Cytochrome P450
pdb|1FAH|B Chain B, Structure Of Cytochrome P450
Length = 471
Score = 108 bits (271), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 91/354 (25%), Positives = 161/354 (45%), Gaps = 34/354 (9%)
Query: 137 WKRLRNKLSPTFTSGKIKYMFPLIKKCSDQLITTIRKQIGESKQMSLEVKDYCARYTTDV 196
WK+ N L P+F+ +K ++ + QL+ + + +EV + R T D
Sbjct: 96 WKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADE---HIEVPEDMTRLTLDT 152
Query: 197 IGSTAFGIEINSLENPDSEFRQVSLLVMKPSVLQMLKAVLSELIPLIKYLNLK--IFDPR 254
IG F NS +R P + M++A L E + ++ N +D
Sbjct: 153 IGLCGFNYRFNSF------YRDQP----HPFITSMVRA-LDEAMNKLQRANPDDPAYDEN 201
Query: 255 ISQF------FSNLVKTNLSYREKNNIKRDDFLNIMMQLQIAQRGKTLSPDDVEMTDDVI 308
QF ++LV ++ R+ + + DD L M+ + + G+ L D+ I
Sbjct: 202 KRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLD-------DENI 254
Query: 309 TAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSY 368
Q F G+E +S +L+F LY L +NP + K +E A + +Y+ ++ Y
Sbjct: 255 RYQIITFLIAGHEATSGLLSFALYFLVKNPHVLQKAAEE-AARVLVDPVPSYKQVKQLKY 313
Query: 369 LDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPEYYPDP-E 427
+ V EALR++P+ P + K+ + + L+ G ++ + +H D + D E
Sbjct: 314 VGMVLNEALRLWPTAPAFS-LYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVE 372
Query: 428 KFDPERFSPENIESRPHYTYLPFGDGPRNCIGMRFGTIQFKIGLAQLISNFEFS 481
+F PERF EN + P + + PFG+G R CIG +F + + L ++ +F+F
Sbjct: 373 EFRPERF--ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|1JME|A Chain A, Crystal Structure Of Phe393his Cytochrome P450 Bm3
pdb|1JME|B Chain B, Crystal Structure Of Phe393his Cytochrome P450 Bm3
Length = 455
Score = 108 bits (270), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 91/354 (25%), Positives = 161/354 (45%), Gaps = 34/354 (9%)
Query: 137 WKRLRNKLSPTFTSGKIKYMFPLIKKCSDQLITTIRKQIGESKQMSLEVKDYCARYTTDV 196
WK+ N L P+F+ +K ++ + QL+ + + +EV + R T D
Sbjct: 96 WKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADE---HIEVPEDMTRLTLDT 152
Query: 197 IGSTAFGIEINSLENPDSEFRQVSLLVMKPSVLQMLKAVLSELIPLIKYLNLK--IFDPR 254
IG F NS +R P + M++A L E + ++ N +D
Sbjct: 153 IGLCGFNYRFNSF------YRDQP----HPFITSMVRA-LDEAMNKLQRANPDDPAYDEN 201
Query: 255 ISQF------FSNLVKTNLSYREKNNIKRDDFLNIMMQLQIAQRGKTLSPDDVEMTDDVI 308
QF ++LV ++ R+ + + DD L M+ + + G+ L D+ I
Sbjct: 202 KRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLD-------DENI 254
Query: 309 TAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSY 368
Q F G+ET+S +L+F LY L +NP + K +E A + +Y+ ++ Y
Sbjct: 255 RYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEE-AARVLVDPVPSYKQVKQLKY 313
Query: 369 LDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPEYYPDP-E 427
+ V EALR++P+ P + K+ + + L+ G ++ + +H D + D E
Sbjct: 314 VGMVLNEALRLWPTAPAFS-LYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVE 372
Query: 428 KFDPERFSPENIESRPHYTYLPFGDGPRNCIGMRFGTIQFKIGLAQLISNFEFS 481
+F PERF EN + P + + P G+G R CIG +F + + L ++ +F+F
Sbjct: 373 EFRPERF--ENPSAIPQHAFKPHGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|1P0V|A Chain A, F393a Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0V|B Chain B, F393a Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 108 bits (269), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 91/354 (25%), Positives = 161/354 (45%), Gaps = 34/354 (9%)
Query: 137 WKRLRNKLSPTFTSGKIKYMFPLIKKCSDQLITTIRKQIGESKQMSLEVKDYCARYTTDV 196
WK+ N L P+F+ +K ++ + QL+ + + +EV + R T D
Sbjct: 96 WKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADE---HIEVPEDMTRLTLDT 152
Query: 197 IGSTAFGIEINSLENPDSEFRQVSLLVMKPSVLQMLKAVLSELIPLIKYLNLK--IFDPR 254
IG F NS +R P + M++A L E + ++ N +D
Sbjct: 153 IGLCGFNYRFNSF------YRDQP----HPFITSMVRA-LDEAMNKLQRANPDDPAYDEN 201
Query: 255 ISQF------FSNLVKTNLSYREKNNIKRDDFLNIMMQLQIAQRGKTLSPDDVEMTDDVI 308
QF ++LV ++ R+ + + DD L M+ + + G+ L D+ I
Sbjct: 202 KRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLD-------DENI 254
Query: 309 TAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSY 368
Q F G+ET+S +L+F LY L +NP + K +E A + +Y+ ++ Y
Sbjct: 255 RYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEE-AARVLVDPVPSYKQVKQLKY 313
Query: 369 LDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPEYYPDP-E 427
+ V EALR++P+ P + K+ + + L+ G ++ + +H D + D E
Sbjct: 314 VGMVLNEALRLWPTAPAFS-LYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVE 372
Query: 428 KFDPERFSPENIESRPHYTYLPFGDGPRNCIGMRFGTIQFKIGLAQLISNFEFS 481
+F PERF EN + P + + P G+G R CIG +F + + L ++ +F+F
Sbjct: 373 EFRPERF--ENPSAIPQHAFKPAGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|4DUB|A Chain A, Cytochrome P450 Bm3h-9d7 Mri Sensor Bound To Dopamine
pdb|4DUB|B Chain B, Cytochrome P450 Bm3h-9d7 Mri Sensor Bound To Dopamine
Length = 472
Score = 108 bits (269), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 91/354 (25%), Positives = 161/354 (45%), Gaps = 34/354 (9%)
Query: 137 WKRLRNKLSPTFTSGKIKYMFPLIKKCSDQLITTIRKQIGESKQMSLEVKDYCARYTTDV 196
WK+ N L P+F+ +K ++ + QL+ + + +EV + R T D
Sbjct: 97 WKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADE---HIEVPEDMTRLTLDT 153
Query: 197 IGSTAFGIEINSLENPDSEFRQVSLLVMKPSVLQMLKAVLSELIPLIKYLNLK--IFDPR 254
IG F NS +R P + M++A L E + ++ N +D
Sbjct: 154 IGLCGFNYRFNSF------YRDQP----HPFITSMVRA-LDEAMNKLQRANPDDPAYDEN 202
Query: 255 ISQF------FSNLVKTNLSYREKNNIKRDDFLNIMMQLQIAQRGKTLSPDDVEMTDDVI 308
QF ++LV ++ R+ + + DD L M+ + + G+ L D+ I
Sbjct: 203 KRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLD-------DENI 255
Query: 309 TAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSY 368
Q F G+E +S +L+F LY L +NP + K +E A + +Y+ ++ Y
Sbjct: 256 RYQIITFLAAGHEATSGLLSFALYFLVKNPHVLQKAAEE-AARVLVDPVPSYKQVKQLKY 314
Query: 369 LDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPEYYPDP-E 427
+ V EALR++P+ P + K+ + + L+ G ++ + +H D + D E
Sbjct: 315 VGMVLNEALRLWPTGPAFS-LYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVE 373
Query: 428 KFDPERFSPENIESRPHYTYLPFGDGPRNCIGMRFGTIQFKIGLAQLISNFEFS 481
+F PERF EN + P + + PFG+G R CIG +F + + L ++ +F+F
Sbjct: 374 EFRPERF--ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 425
>pdb|4DUA|A Chain A, Cytochrome P450 Bm3h-9d7 Mri Sensor, No Ligand
pdb|4DUA|B Chain B, Cytochrome P450 Bm3h-9d7 Mri Sensor, No Ligand
Length = 471
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 91/354 (25%), Positives = 161/354 (45%), Gaps = 34/354 (9%)
Query: 137 WKRLRNKLSPTFTSGKIKYMFPLIKKCSDQLITTIRKQIGESKQMSLEVKDYCARYTTDV 196
WK+ N L P+F+ +K ++ + QL+ + + +EV + R T D
Sbjct: 96 WKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADE---HIEVPEDMTRLTLDT 152
Query: 197 IGSTAFGIEINSLENPDSEFRQVSLLVMKPSVLQMLKAVLSELIPLIKYLNLK--IFDPR 254
IG F NS +R P + M++A L E + ++ N +D
Sbjct: 153 IGLCGFNYRFNSF------YRDQP----HPFITSMVRA-LDEAMNKLQRANPDDPAYDEN 201
Query: 255 ISQF------FSNLVKTNLSYREKNNIKRDDFLNIMMQLQIAQRGKTLSPDDVEMTDDVI 308
QF ++LV ++ R+ + + DD L M+ + + G+ L D+ I
Sbjct: 202 KRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLD-------DENI 254
Query: 309 TAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSY 368
Q F G+E +S +L+F LY L +NP + K +E A + +Y+ ++ Y
Sbjct: 255 RYQIITFLAAGHEATSGLLSFALYFLVKNPHVLQKAAEE-AARVLVDPVPSYKQVKQLKY 313
Query: 369 LDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPEYYPDP-E 427
+ V EALR++P+ P + K+ + + L+ G ++ + +H D + D E
Sbjct: 314 VGMVLNEALRLWPTGPAFS-LYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVE 372
Query: 428 KFDPERFSPENIESRPHYTYLPFGDGPRNCIGMRFGTIQFKIGLAQLISNFEFS 481
+F PERF EN + P + + PFG+G R CIG +F + + L ++ +F+F
Sbjct: 373 EFRPERF--ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|3KX4|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX4|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 91/354 (25%), Positives = 161/354 (45%), Gaps = 34/354 (9%)
Query: 137 WKRLRNKLSPTFTSGKIKYMFPLIKKCSDQLITTIRKQIGESKQMSLEVKDYCARYTTDV 196
WK+ N L P+F+ +K ++ + QL+ + + +EV + R T D
Sbjct: 96 WKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADE---HIEVPEDMTRLTLDT 152
Query: 197 IGSTAFGIEINSLENPDSEFRQVSLLVMKPSVLQMLKAVLSELIPLIKYLNLK--IFDPR 254
IG F NS +R P + M++A L E + ++ N +D
Sbjct: 153 IGLCGFNYRFNSF------YRDQP----HPFITSMVRA-LDEAMNKLQRANPDDPAYDEN 201
Query: 255 ISQF------FSNLVKTNLSYREKNNIKRDDFLNIMMQLQIAQRGKTLSPDDVEMTDDVI 308
QF ++LV ++ R+ + + DD L M+ + + G+ L D+ I
Sbjct: 202 KRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLD-------DENI 254
Query: 309 TAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSY 368
Q F G+ET+S +L+F LY L +NP + K +E A + +Y+ ++ Y
Sbjct: 255 RYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEE-AARVLVDPVPSYKQVKQLKY 313
Query: 369 LDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPEYYPDP-E 427
+ V EALR++P+ P + K+ + + L+ G ++ + +H D + D E
Sbjct: 314 VGMVLNEALRLWPTAPAFS-LYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVE 372
Query: 428 KFDPERFSPENIESRPHYTYLPFGDGPRNCIGMRFGTIQFKIGLAQLISNFEFS 481
+F PERF EN + P + + PFG+G R C G +F + + L ++ +F+F
Sbjct: 373 EFRPERF--ENPSAIPQHAFKPFGNGQRACEGQQFALHEATLVLGMMLKHFDFE 424
>pdb|3HF2|A Chain A, Crystal Structure Of The I401p Mutant Of Cytochrome P450
Bm3
pdb|3HF2|B Chain B, Crystal Structure Of The I401p Mutant Of Cytochrome P450
Bm3
Length = 482
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 91/354 (25%), Positives = 161/354 (45%), Gaps = 34/354 (9%)
Query: 137 WKRLRNKLSPTFTSGKIKYMFPLIKKCSDQLITTIRKQIGESKQMSLEVKDYCARYTTDV 196
WK+ N L P+F+ +K ++ + QL+ + + +EV + R T D
Sbjct: 97 WKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADE---HIEVPEDMTRLTLDT 153
Query: 197 IGSTAFGIEINSLENPDSEFRQVSLLVMKPSVLQMLKAVLSELIPLIKYLNLK--IFDPR 254
IG F NS +R P + M++A L E + ++ N +D
Sbjct: 154 IGLCGFNYRFNSF------YRDQP----HPFITSMVRA-LDEAMNKLQRANPDDPAYDEN 202
Query: 255 ISQF------FSNLVKTNLSYREKNNIKRDDFLNIMMQLQIAQRGKTLSPDDVEMTDDVI 308
QF ++LV ++ R+ + + DD L M+ + + G+ L D+ I
Sbjct: 203 KRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLD-------DENI 255
Query: 309 TAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSY 368
Q F G+ET+S +L+F LY L +NP + K +E A + +Y+ ++ Y
Sbjct: 256 RYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEE-AARVLVDPVPSYKQVKQLKY 314
Query: 369 LDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPEYYPDP-E 427
+ V EALR++P+ P + K+ + + L+ G ++ + +H D + D E
Sbjct: 315 VGMVLNEALRLWPTAPAFS-LYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVE 373
Query: 428 KFDPERFSPENIESRPHYTYLPFGDGPRNCIGMRFGTIQFKIGLAQLISNFEFS 481
+F PERF EN + P + + PFG+G R C G +F + + L ++ +F+F
Sbjct: 374 EFRPERF--ENPSAIPQHAFKPFGNGQRACPGQQFALHEATLVLGMMLKHFDFE 425
>pdb|3KX5|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX5|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 91/354 (25%), Positives = 161/354 (45%), Gaps = 34/354 (9%)
Query: 137 WKRLRNKLSPTFTSGKIKYMFPLIKKCSDQLITTIRKQIGESKQMSLEVKDYCARYTTDV 196
WK+ N L P+F+ +K ++ + QL+ + + +EV + R T D
Sbjct: 96 WKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADE---HIEVPEDMTRLTLDT 152
Query: 197 IGSTAFGIEINSLENPDSEFRQVSLLVMKPSVLQMLKAVLSELIPLIKYLNLK--IFDPR 254
IG F NS +R P + M++A L E + ++ N +D
Sbjct: 153 IGLCGFNYRFNSF------YRDQP----HPFITSMVRA-LDEAMNKLQRANPDDPAYDEN 201
Query: 255 ISQF------FSNLVKTNLSYREKNNIKRDDFLNIMMQLQIAQRGKTLSPDDVEMTDDVI 308
QF ++LV ++ R+ + + DD L M+ + + G+ L D+ I
Sbjct: 202 KRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLD-------DENI 254
Query: 309 TAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSY 368
Q G+ET+S +L+F LY L +NP + K +E A + +Y+ ++ Y
Sbjct: 255 RYQIITELIAGHETTSGLLSFALYFLVKNPHVLQKAAEE-AARVLVDPVPSYKQVKQLKY 313
Query: 369 LDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPEYYPDP-E 427
+ V EALR++P+ P + K+ + + L+ G ++ + +H D + D E
Sbjct: 314 VGMVLNEALRLWPTAPAFS-LYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVE 372
Query: 428 KFDPERFSPENIESRPHYTYLPFGDGPRNCIGMRFGTIQFKIGLAQLISNFEFS 481
+F PERF EN + P + + PFG+G R CIG +F + + L ++ +F+F
Sbjct: 373 EFRPERF--ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|4DTW|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Serotonin
pdb|4DTW|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Serotonin
pdb|4DTY|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor, No Ligand
pdb|4DTY|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor, No Ligand
pdb|4DTZ|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Dopamine
pdb|4DTZ|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Dopamine
Length = 469
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 91/354 (25%), Positives = 160/354 (45%), Gaps = 34/354 (9%)
Query: 137 WKRLRNKLSPTFTSGKIKYMFPLIKKCSDQLITTIRKQIGESKQMSLEVKDYCARYTTDV 196
WK+ N L P+F+ +K ++ + QL+ + + +EV + R T D
Sbjct: 96 WKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADE---HIEVPEDMTRLTLDT 152
Query: 197 IGSTAFGIEINSLENPDSEFRQVSLLVMKPSVLQMLKAVLSELIPLIKYLNLK--IFDPR 254
IG F NS +R P + M++A L E + ++ N +D
Sbjct: 153 IGLCGFNYRFNSF------YRDQP----HPFITSMVRA-LDEAMNKLRRANPDDPAYDEN 201
Query: 255 ISQF------FSNLVKTNLSYREKNNIKRDDFLNIMMQLQIAQRGKTLSPDDVEMTDDVI 308
QF ++LV ++ R+ + + DD L M+ + + G+ L D+ I
Sbjct: 202 KRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLD-------DENI 254
Query: 309 TAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSY 368
Q F G+E +S +L+F LY L +NP K +E A + +Y+ ++ Y
Sbjct: 255 RYQIITFLAAGHEATSGLLSFALYFLVKNPHELQKAAEE-AARVLVDPVPSYKQVKQLKY 313
Query: 369 LDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPEYYPDP-E 427
+ V EALR++P+ P + K+ + + L+ G ++ + +H D + D E
Sbjct: 314 VGMVLNEALRLWPTAPAFS-LYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVE 372
Query: 428 KFDPERFSPENIESRPHYTYLPFGDGPRNCIGMRFGTIQFKIGLAQLISNFEFS 481
+F PERF EN + P + + PFG+G R CIG +F + + L ++ +F+F
Sbjct: 373 EFRPERF--ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|4DU2|B Chain B, Cytochrome P450 Bm3h-B7 Mri Sensor Bound To Dopamine
pdb|4DU2|A Chain A, Cytochrome P450 Bm3h-B7 Mri Sensor Bound To Dopamine
Length = 470
Score = 105 bits (262), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 90/354 (25%), Positives = 160/354 (45%), Gaps = 34/354 (9%)
Query: 137 WKRLRNKLSPTFTSGKIKYMFPLIKKCSDQLITTIRKQIGESKQMSLEVKDYCARYTTDV 196
WK+ N L P+F+ +K ++ + QL+ + + +EV + R T D
Sbjct: 97 WKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADE---HIEVPEDMTRLTLDT 153
Query: 197 IGSTAFGIEINSLENPDSEFRQVSLLVMKPSVLQMLKAVLSELIPLIKYLNLK--IFDPR 254
IG F NS +R P + M++A L E + ++ N +D
Sbjct: 154 IGLCGFNYRFNSF------YRDQP----HPFITSMVRA-LDEAMNKLRRANPDDPAYDEN 202
Query: 255 ISQF------FSNLVKTNLSYREKNNIKRDDFLNIMMQLQIAQRGKTLSPDDVEMTDDVI 308
QF ++LV ++ R+ + + DD L M+ + + G+ L D+ I
Sbjct: 203 KRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLD-------DENI 255
Query: 309 TAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSY 368
Q F G+E +S +L+F LY L +NP K +E A + +++ ++ Y
Sbjct: 256 RYQIITFLAAGHEATSGLLSFALYFLVKNPHELQKAAEEA-ARVLVDPVPSHKQVKQLKY 314
Query: 369 LDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPEYYPDP-E 427
+ V EALR++P+ P + K+ + + L+ G ++ + +H D + D E
Sbjct: 315 VGMVLNEALRLWPTAPAFS-LYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTVWGDDVE 373
Query: 428 KFDPERFSPENIESRPHYTYLPFGDGPRNCIGMRFGTIQFKIGLAQLISNFEFS 481
+F PERF EN + P + + PFG+G R CIG +F + + L ++ +F+F
Sbjct: 374 EFRPERF--ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 425
>pdb|3RUK|A Chain A, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|B Chain B, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|C Chain C, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|D Chain D, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3SWZ|A Chain A, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|B Chain B, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|C Chain C, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|D Chain D, Human Cytochrome P450 17a1 In Complex With Tok-001
Length = 494
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 113/449 (25%), Positives = 196/449 (43%), Gaps = 38/449 (8%)
Query: 55 FLSRITFHQMHCEFYNKIKYDLKLPYGGLYHL-MTPK--LMVTDPELYKYILIKDFDHFV 111
+ + F H +N + L+ YG +Y + M K ++V +L K +LIK F
Sbjct: 18 LVGSLPFLPRHGHMHNNF-FKLQKKYGPIYSVRMGTKTTVIVGHHQLAKEVLIKKGKDFS 76
Query: 112 DR-GIGESDAKRDPIEGHLFGSKGEYWKRLRNKLSPTFT---SGKIKYMFPLIKKCSDQL 167
R + D + +G F G +W+ R TF G K ++K Q
Sbjct: 77 GRPQMATLDIASNNRKGIAFADSGAHWQLHRRLAMATFALFKDGDQK-----LEKIICQE 131
Query: 168 ITTIRKQIGESKQMSLEVKDYCARYTTDVIGSTAFGIEINSLENPDSEFRQVSLLVMKPS 227
I+T+ + S+++ T+VI F S +N D E + +
Sbjct: 132 ISTLCDMLATHNGQSIDISFPVFVAVTNVISLICFN---TSYKNGDPELNVIQNY-NEGI 187
Query: 228 VLQMLKAVLSELIPLIKYLNLKIFDP-----RISQFFSNLVKTNLSYREKNNIKRD---D 279
+ + K L +L+P +K K + +I N + N Y+EK + D +
Sbjct: 188 IDNLSKDSLVDLVPWLKIFPNKTLEKLKSHVKIRNDLLNKILEN--YKEK--FRSDSITN 243
Query: 280 FLNIMMQLQIAQRGKTLSPD-DVEM-TDDVITAQSFVFFFGGYETSSSVLTFCLYELARN 337
L+ +MQ ++ PD D E+ +D+ I F G ET++SV+ + L L N
Sbjct: 244 MLDTLMQAKMNSDNGNAGPDQDSELLSDNHILTTIGDIFGAGVETTTSVVKWTLAFLLHN 303
Query: 338 PDIQSKLRQEIMATKKKEGELTYEICHKMSYLDKVTKEALRMYPSLPQL--DRISVKKYK 395
P ++ KL +EI T +++ L+ +E LR+ P P L + +V
Sbjct: 304 PQVKKKLYEEIDQNVGFSRTPTISDRNRLLLLEATIREVLRLRPVAPMLIPHKANVDSSI 363
Query: 396 LPNTDLTLDVGTKISIPTFAIHYDPEYYPDPEKFDPERF-SPENIE-SRPHYTYLPFGDG 453
+ +D GT++ I +A+H++ + + P++F PERF +P + P +YLPFG G
Sbjct: 364 ---GEFAVDKGTEVIINLWALHHNEKEWHQPDQFMPERFLNPAGTQLISPSVSYLPFGAG 420
Query: 454 PRNCIGMRFGTIQFKIGLAQLISNFEFSI 482
PR+CIG + + +A L+ F+ +
Sbjct: 421 PRSCIGEILARQELFLIMAWLLQRFDLEV 449
>pdb|3MZS|A Chain A, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|B Chain B, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|C Chain C, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|D Chain D, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
Length = 486
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 92/369 (24%), Positives = 174/369 (47%), Gaps = 33/369 (8%)
Query: 127 GHLFGSKGEYWKRLRNKLSPTFTSGK-IKYMFPLIKKCSDQLITTIRKQIGE--SKQMSL 183
G LF G WK+ R L+ + + IK PL+ S ++ + K+I + S +
Sbjct: 100 GVLFKKSGT-WKKDRVVLNTEVMAPEAIKNFIPLLNPVSQDFVSLLHKRIKQQGSGKFVG 158
Query: 184 EVKDYCARYTTDVIGSTAFGIEINSLE---NPDSEFRQVSLLVMKPSVLQMLKAVLSELI 240
++K+ + + I + FG + LE NP+++ ++ M + + +L V EL
Sbjct: 159 DIKEDLFHFAFESITNVMFGERLGMLEETVNPEAQKFIDAVYKMFHTSVPLLN-VPPELY 217
Query: 241 PLIKYLNLKIFDPRISQFFSNLVK-TNLSYREKNNIKRDDFLNIMMQLQIAQRGKTLSPD 299
L + + F+ K T + Y++ ++ +F N L + + + +
Sbjct: 218 RLFRTKTWRDHVAAWDTIFNKAEKYTEIFYQDLR--RKTEFRNYPGILYCLLKSEKMLLE 275
Query: 300 DVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIM-ATKKKEGEL 358
DV+ + A GG T+S L + LYE+AR+ ++Q LR+E++ A ++ EG++
Sbjct: 276 DVKANITEMLA-------GGVNTTSMTLQWHLYEMARSLNVQEMLREEVLNARRQAEGDI 328
Query: 359 TYEICHKMSYLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLTLD-----VGTKISIPT 413
+ ++ + L KE LR++P ISV + P +DL L T + +
Sbjct: 329 S-KMLQMVPLLKASIKETLRLHP-------ISVTLQRYPESDLVLQDYLIPAKTLVQVAI 380
Query: 414 FAIHYDPEYYPDPEKFDPERFSPENIESRPHYTYLPFGDGPRNCIGMRFGTIQFKIGLAQ 473
+A+ DP ++ P+KFDP R+ ++ + H+ L FG G R C+G R ++ + L
Sbjct: 381 YAMGRDPAFFSSPDKFDPTRWLSKD-KDLIHFRNLGFGWGVRQCVGRRIAELEMTLFLIH 439
Query: 474 LISNFEFSI 482
++ NF+ +
Sbjct: 440 ILENFKVEM 448
>pdb|3NA0|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 20,22-
Dihydroxycholesterol
pdb|3NA0|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 20,22-
Dihydroxycholesterol
Length = 471
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 88/364 (24%), Positives = 159/364 (43%), Gaps = 33/364 (9%)
Query: 133 KGEYWKRLRNKLSPTFTSGK-IKYMFPLIKKCSDQLITTIRKQI--GESKQMSLEVKDYC 189
K WK+ R L+ + + K PL+ S ++ + ++I S S ++ D
Sbjct: 100 KSAAWKKDRVALNQEVMAPEATKNFLPLLDAVSRDFVSVLHRRIKKAGSGNYSGDISDDL 159
Query: 190 ARYTTDVIGSTAFGIEINSLE---NPDSEFRQVSLLVMKPSVLQMLKAVLSELIP-LIKY 245
R+ + I + FG LE NP+++ ++ M + + ML L P L +
Sbjct: 160 FRFAFESITNVIFGERQGMLEEVVNPEAQRFIDAIYQMFHTSVPMLN-----LPPDLFRL 214
Query: 246 LNLKIFDPRISQFFSNLVKTNL-------SYREKNNIKRDDFLNIMMQLQIAQRGKTLSP 298
K + ++ + K ++ R+K ++ D + I+ +L
Sbjct: 215 FRTKTWKDHVAAWDVIFSKADIYTQNFYWELRQKGSVHHD-YRGILYRLL---------- 263
Query: 299 DDVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGEL 358
D +M+ + I A GG +T+S L + LYE+ARN +Q LR E++A + +
Sbjct: 264 GDSKMSFEDIKANVTEMLAGGVDTTSMTLQWHLYEMARNLKVQDMLRAEVLAARHQAQGD 323
Query: 359 TYEICHKMSYLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKISIPTFAIHY 418
+ + L KE LR++P L R V L D + T + + +A+
Sbjct: 324 MATMLQLVPLLKASIKETLRLHPISVTLQRYLVNDLVL--RDYMIPAKTLVQVAIYALGR 381
Query: 419 DPEYYPDPEKFDPERFSPENIESRPHYTYLPFGDGPRNCIGMRFGTIQFKIGLAQLISNF 478
+P ++ DPE FDP R+ ++ ++ ++ L FG G R C+G R ++ I L ++ NF
Sbjct: 382 EPTFFFDPENFDPTRWLSKD-KNITYFRNLGFGWGVRQCLGRRIAELEMTIFLINMLENF 440
Query: 479 EFSI 482
I
Sbjct: 441 RVEI 444
>pdb|3N9Y|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With
Cholesterol
pdb|3N9Y|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With
Cholesterol
pdb|3N9Z|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 22-
Hydroxycholesterol
pdb|3N9Z|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 22-
Hydroxycholesterol
pdb|3NA1|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 20-
Hydroxycholesterol
pdb|3NA1|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 20-
Hydroxycholesterol
Length = 487
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 88/364 (24%), Positives = 159/364 (43%), Gaps = 33/364 (9%)
Query: 133 KGEYWKRLRNKLSPTFTSGK-IKYMFPLIKKCSDQLITTIRKQI--GESKQMSLEVKDYC 189
K WK+ R L+ + + K PL+ S ++ + ++I S S ++ D
Sbjct: 103 KSAAWKKDRVALNQEVMAPEATKNFLPLLDAVSRDFVSVLHRRIKKAGSGNYSGDISDDL 162
Query: 190 ARYTTDVIGSTAFGIEINSLE---NPDSEFRQVSLLVMKPSVLQMLKAVLSELIP-LIKY 245
R+ + I + FG LE NP+++ ++ M + + ML L P L +
Sbjct: 163 FRFAFESITNVIFGERQGMLEEVVNPEAQRFIDAIYQMFHTSVPMLN-----LPPDLFRL 217
Query: 246 LNLKIFDPRISQFFSNLVKTNL-------SYREKNNIKRDDFLNIMMQLQIAQRGKTLSP 298
K + ++ + K ++ R+K ++ D + I+ +L
Sbjct: 218 FRTKTWKDHVAAWDVIFSKADIYTQNFYWELRQKGSVHHD-YRGILYRLL---------- 266
Query: 299 DDVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGEL 358
D +M+ + I A GG +T+S L + LYE+ARN +Q LR E++A + +
Sbjct: 267 GDSKMSFEDIKANVTEMLAGGVDTTSMTLQWHLYEMARNLKVQDMLRAEVLAARHQAQGD 326
Query: 359 TYEICHKMSYLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKISIPTFAIHY 418
+ + L KE LR++P L R V L D + T + + +A+
Sbjct: 327 MATMLQLVPLLKASIKETLRLHPISVTLQRYLVNDLVL--RDYMIPAKTLVQVAIYALGR 384
Query: 419 DPEYYPDPEKFDPERFSPENIESRPHYTYLPFGDGPRNCIGMRFGTIQFKIGLAQLISNF 478
+P ++ DPE FDP R+ ++ ++ ++ L FG G R C+G R ++ I L ++ NF
Sbjct: 385 EPTFFFDPENFDPTRWLSKD-KNITYFRNLGFGWGVRQCLGRRIAELEMTIFLINMLENF 443
Query: 479 EFSI 482
I
Sbjct: 444 RVEI 447
>pdb|4DVQ|A Chain A, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|B Chain B, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|C Chain C, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|D Chain D, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|E Chain E, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|F Chain F, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|G Chain G, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|H Chain H, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|I Chain I, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|J Chain J, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|K Chain K, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|L Chain L, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4FDH|A Chain A, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|B Chain B, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|C Chain C, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|D Chain D, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|E Chain E, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|F Chain F, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|G Chain G, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|H Chain H, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|I Chain I, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|J Chain J, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|K Chain K, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|L Chain L, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
Length = 483
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 83/347 (23%), Positives = 161/347 (46%), Gaps = 28/347 (8%)
Query: 127 GH---LFGSKGEYWKRLRNKLSPTFTSGK-IKYMFPLIKKCSDQLITTIRKQIGESKQ-- 180
GH +F G W+ R +L+P S K ++ P++ + ++K++ ++ +
Sbjct: 98 GHKCGVFLLNGPEWRFNRLRLNPDVLSPKAVQRFLPMVDAVARDFSQALKKKVLQNARGS 157
Query: 181 MSLEVKDYCARYTTDVIGSTAFGIEINSL-ENPDSEFRQV--SLLVMKPSVLQML---KA 234
++L+V+ YT + FG + + +P S +L VM S +Q++ ++
Sbjct: 158 LTLDVQPSIFHYTIEASNLALFGERLGLVGHSPSSASLNFLHALEVMFKSTVQLMFMPRS 217
Query: 235 VLSELIPLIKYLNLKIFDPRISQFFSNLVKTNLSYREKNNIKRDDFLNIMMQLQIAQRGK 294
+ + P + + + +D I Q+ N ++ Y+E + + I+ +L +
Sbjct: 218 LSRWISPKVWKEHFEAWDC-IFQYGDNCIQK--IYQELAFNRPQHYTGIVAELLL----- 269
Query: 295 TLSPDDVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKK 354
E++ + I A S G +T++ L L+ELARNPD+Q LRQE +A
Sbjct: 270 -----KAELSLEAIKANSMELTAGSVDTTAFPLLMTLFELARNPDVQQILRQESLAAAAS 324
Query: 355 EGELTYEICHKMSYLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKISIPTF 414
E + ++ L KE LR+YP L+R+ L N + GT + + +
Sbjct: 325 ISEHPQKATTELPLLRAALKETLRLYPVGLFLERVVSSDLVLQNYH--IPAGTLVQVFLY 382
Query: 415 AIHYDPEYYPDPEKFDPERFSPENIESRPHYTYLPFGDGPRNCIGMR 461
++ + +P PE+++P+R+ R ++ ++PFG G R C+G R
Sbjct: 383 SLGRNAALFPRPERYNPQRWLDIRGSGR-NFHHVPFGFGMRQCLGRR 428
>pdb|3K9V|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9V|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9Y|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
pdb|3K9Y|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
Length = 482
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 91/187 (48%), Gaps = 14/187 (7%)
Query: 317 FGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSYLDKVTKEA 376
ET+++ L + LY L+RNP Q +L QE+ + E M YL KE+
Sbjct: 293 LAAVETTANSLMWILYNLSRNPQAQRRLLQEVQSVLPDNQTPRAEDLRNMPYLKACLKES 352
Query: 377 LRMYPSLP----QLDRISV-KKYKLPNTDLTLDVGTKISIPTFAIHYDPEYYPDPEKFDP 431
+R+ PS+P LD+ +V +Y LP GT +++ T + + + D KF P
Sbjct: 353 MRLTPSVPFTTRTLDKPTVLGEYALPK-------GTVLTLNTQVLGSSEDNFEDSHKFRP 405
Query: 432 ERFSPENIESRPHYTYLPFGDGPRNCIGMRFGTIQFKIGLAQLISNFEFSIDSANATFEY 491
ER+ + + P + +LPFG G R CIG R +Q + L +I ++ + + N E
Sbjct: 406 ERWLQKEKKINP-FAHLPFGIGKRMCIGRRLAELQLHLALCWIIQKYDI-VATDNEPVEM 463
Query: 492 LKGSILL 498
L IL+
Sbjct: 464 LHLGILV 470
>pdb|3DBG|A Chain A, Crystal Structure Of Cytochrome P450 170a1 (Cyp170a1) From
Streptomyces Coelicolor
pdb|3DBG|B Chain B, Crystal Structure Of Cytochrome P450 170a1 (Cyp170a1) From
Streptomyces Coelicolor
pdb|3EL3|A Chain A, Distinct Monooxygenase And Farnesene Synthase Active Sites
In Cytochrome P450 170a1
pdb|3EL3|B Chain B, Distinct Monooxygenase And Farnesene Synthase Active Sites
In Cytochrome P450 170a1
Length = 467
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 99/219 (45%), Gaps = 11/219 (5%)
Query: 262 LVKTNLSYREKNNIKRDDFLNIMMQLQIAQRGKTLSPDDVEMTDDVITAQSFVFFFGGYE 321
LV ++ R + K DD L +++ + G + + E+ D V+ G E
Sbjct: 226 LVDEIIAERRASGQKPDDLLTALLEAK-DDNGDPIG--EQEIHDQVVA-----ILTPGSE 277
Query: 322 TSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSYLDKVTKEALRMYP 381
T +S + + L LA +P+ ++R E+ A + +E K+ + V EA+R+ P
Sbjct: 278 TIASTIMWLLQALADHPEHADRIRDEVEAVTGGR-PVAFEDVRKLRHTGNVIVEAMRLRP 336
Query: 382 SLPQLDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPEYYPDPEKFDPERFSPENIES 441
++ L R +V + +L + G I +AI DP+ Y D +FDP+R+ PE +
Sbjct: 337 AVWVLTRRAVAESEL--GGYRIPAGADIIYSPYAIQRDPKSYDDNLEFDPDRWLPERAAN 394
Query: 442 RPHYTYLPFGDGPRNCIGMRFGTIQFKIGLAQLISNFEF 480
P Y PF G R C F Q + A L + + F
Sbjct: 395 VPKYAMKPFSAGKRKCPSDHFSMAQLTLITAALATKYRF 433
>pdb|1EA1|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Complex With Fluconazole
pdb|1E9X|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Complex With 4-
Phenylimidazole
pdb|1H5Z|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Ferric Low-Spin State
Length = 455
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 95/200 (47%), Gaps = 6/200 (3%)
Query: 284 MMQLQIAQRGKTLSPDDVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSK 343
M+ + IA + +T +P + D IT F G+ TSS ++ L EL R+ D +
Sbjct: 225 MLDVLIAVKAETGTP---RFSADEITGMFISMMFAGHHTSSGTASWTLIELMRHRDAYAA 281
Query: 344 LRQEIMATKKKEGELTYEICHKMSYLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLTL 403
+ E+ +++ ++ L+ V KE LR++P L L R++ ++++ +
Sbjct: 282 VIDELDELYGDGRSVSFHALRQIPQLENVLKETLRLHPPLIILMRVAKGEFEVQGH--RI 339
Query: 404 DVGTKISIPTFAIHYDPEYYPDPEKFDPERF-SPENIESRPHYTYLPFGDGPRNCIGMRF 462
G ++ + PE +PDP F P R+ P + +T++PFG G C+G F
Sbjct: 340 HEGDLVAASPAISNRIPEDFPDPHDFVPARYEQPRQEDLLNRWTWIPFGAGRHRCVGAAF 399
Query: 463 GTIQFKIGLAQLISNFEFSI 482
+Q K + L+ +EF +
Sbjct: 400 AIMQIKAIFSVLLREYEFEM 419
>pdb|2W0A|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor
N-[(1s)-2-Methyl-1-(Pyridin-4-Ylcarbamoyl)propyl]
Cyclohexanecarboxamide
Length = 455
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 95/200 (47%), Gaps = 6/200 (3%)
Query: 284 MMQLQIAQRGKTLSPDDVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSK 343
M+ + IA + +T +P + D IT F G+ TSS ++ L EL R+ D +
Sbjct: 225 MLDVLIAVKAETGTP---RFSADEITGMFISMMFAGHHTSSGTASWTLIELMRHRDAYAA 281
Query: 344 LRQEIMATKKKEGELTYEICHKMSYLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLTL 403
+ E+ +++ ++ L+ V KE LR++P L L R++ ++++ +
Sbjct: 282 VIDELDELYGDGRSVSFHALRQIPQLENVLKETLRLHPPLIILMRVAKGEFEVQGH--RI 339
Query: 404 DVGTKISIPTFAIHYDPEYYPDPEKFDPERF-SPENIESRPHYTYLPFGDGPRNCIGMRF 462
G ++ + PE +PDP F P R+ P + +T++PFG G C+G F
Sbjct: 340 HEGDLVAASPAISNRIPEDFPDPHDFVPARYEQPRQEDLLNRWTWIPFGAGRHRCVGAAF 399
Query: 463 GTIQFKIGLAQLISNFEFSI 482
+Q K + L+ +EF +
Sbjct: 400 AIMQIKAIFSVLLREYEFEM 419
>pdb|1X8V|A Chain A, Estriol-Bound And Ligand-Free Structures Of Sterol
14alpha- Demethylase (Cyp51)
pdb|2BZ9|A Chain A, Ligand-Free Structure Of Sterol 14alpha-Demethylase From
Mycobacterium Tuberculosis In P2(1) Space Group
pdb|2BZ9|B Chain B, Ligand-Free Structure Of Sterol 14alpha-Demethylase From
Mycobacterium Tuberculosis In P2(1) Space Group
pdb|2CI0|A Chain A, High Throughput Screening And X-Ray Crystallography
Assisted Evaluation Of Small Molecule Scaffolds For
Cyp51 Inhibitors
pdb|2CIB|A Chain A, High Throughput Screening And X-Ray Crystallography
Assisted Evaluation Of Small Molecule Scaffolds For
Cyp51 Inhibitors
pdb|2VKU|A Chain A, 4,4'-Dihydroxybenzophenone Mimics Sterol Substrate In The
Binding Site Of Sterol 14alpha-Demethylase (Cyp51) In
The X-Ray Structure Of The Complex
pdb|2W09|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor Cis-4-
Methyl-N-[(1s)-3-(Methylsulfanyl)-1-(Pyridin-4-
Ylcarbamoyl)propyl]cyclohexanecarboxamide
pdb|2W0B|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor 3-{[(4-
Methylphenyl)sulfonyl]amino}propyl Pyridin-4-Ylcarbamate
Length = 455
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 95/200 (47%), Gaps = 6/200 (3%)
Query: 284 MMQLQIAQRGKTLSPDDVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSK 343
M+ + IA + +T +P + D IT F G+ TSS ++ L EL R+ D +
Sbjct: 225 MLDVLIAVKAETGTP---RFSADEITGMFISMMFAGHHTSSGTASWTLIELMRHRDAYAA 281
Query: 344 LRQEIMATKKKEGELTYEICHKMSYLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLTL 403
+ E+ +++ ++ L+ V KE LR++P L L R++ ++++ +
Sbjct: 282 VIDELDELYGDGRSVSFHALRQIPQLENVLKETLRLHPPLIILMRVAKGEFEVQGH--RI 339
Query: 404 DVGTKISIPTFAIHYDPEYYPDPEKFDPERF-SPENIESRPHYTYLPFGDGPRNCIGMRF 462
G ++ + PE +PDP F P R+ P + +T++PFG G C+G F
Sbjct: 340 HEGDLVAASPAISNRIPEDFPDPHDFVPARYEQPRQEDLLNRWTWIPFGAGRHRCVGAAF 399
Query: 463 GTIQFKIGLAQLISNFEFSI 482
+Q K + L+ +EF +
Sbjct: 400 AIMQIKAIFSVLLREYEFEM 419
>pdb|1U13|A Chain A, Crystal Structure Analysis Of The C37lC151TC442A-Triple
Mutant Of Cyp51 From Mycobacterium Tuberculosis
Length = 455
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 95/200 (47%), Gaps = 6/200 (3%)
Query: 284 MMQLQIAQRGKTLSPDDVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSK 343
M+ + IA + +T +P + D IT F G+ TSS ++ L EL R+ D +
Sbjct: 225 MLDVLIAVKAETGTP---RFSADEITGMFISMMFAGHHTSSGTASWTLIELMRHRDAYAA 281
Query: 344 LRQEIMATKKKEGELTYEICHKMSYLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLTL 403
+ E+ +++ ++ L+ V KE LR++P L L R++ ++++ +
Sbjct: 282 VIDELDELYGDGRSVSFHALRQIPQLENVLKETLRLHPPLIILMRVAKGEFEVQGH--RI 339
Query: 404 DVGTKISIPTFAIHYDPEYYPDPEKFDPERF-SPENIESRPHYTYLPFGDGPRNCIGMRF 462
G ++ + PE +PDP F P R+ P + +T++PFG G C+G F
Sbjct: 340 HEGDLVAASPAISNRIPEDFPDPHDFVPARYEQPRQEDLLNRWTWIPFGAGRHRCVGAAF 399
Query: 463 GTIQFKIGLAQLISNFEFSI 482
+Q K + L+ +EF +
Sbjct: 400 AIMQIKAIFSVLLREYEFEM 419
>pdb|2PG6|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
Length = 476
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 82/359 (22%), Positives = 155/359 (43%), Gaps = 29/359 (8%)
Query: 132 SKGEYWKRLRNKLSPT---FTSGKIKYMFPLIKKCSDQLITTIRKQIGESKQMSLEVKDY 188
S GE K+LR T F GK + + I++ + LI +R G +++ +
Sbjct: 97 SNGERAKQLRRFSIATLRDFGVGK-RGIEERIQEEAGFLIDALRGTGG----ANIDPTFF 151
Query: 189 CARYTTDVIGSTAFGIEINSLENPDSEFRQVSLLVMKPSVLQMLKAVLSELIPLIKYLNL 248
+R ++VI S FG + + D EF +SLL M + Q +L + +
Sbjct: 152 LSRTVSNVISSIVFG---DRFDYKDKEF--LSLLRMMLGIFQFTSTSTGQLYEMFSSVMK 206
Query: 249 KIFDPRISQF-----FSNLVKTNLSYREKN---NIKRDDFLNIMMQLQIAQRGKTLSPDD 300
+ P+ F + + + + ++ N RD + ++++Q ++ +
Sbjct: 207 HLPGPQQQAFQCLQGLEDFIAKKVEHNQRTLDPNSPRDFIDSFLIRMQEEEKNP-----N 261
Query: 301 VEMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTY 360
E + + F GG ET S+ L + L ++P++++K+ +EI K + +
Sbjct: 262 TEFYLKNLVMTTLQLFIGGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKF 321
Query: 361 EICHKMSYLDKVTKEALRMYPSLP-QLDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYD 419
E KM Y++ V E R +P L R K K D L GT++ ++ D
Sbjct: 322 EDRAKMPYMEAVIHEIQRFGDVIPMSLARRVKKDTKF--RDFFLPKGTEVYPMLGSVLRD 379
Query: 420 PEYYPDPEKFDPERFSPENIESRPHYTYLPFGDGPRNCIGMRFGTIQFKIGLAQLISNF 478
P ++ +P+ F+P+ F E + + ++PF G RNC G ++ + ++ NF
Sbjct: 380 PSFFSNPQDFNPQHFLNEKGQFKKSDAFVPFSIGKRNCFGEGLARMELFLFFTTVMQNF 438
>pdb|2PG5|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297q
Length = 476
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 82/359 (22%), Positives = 155/359 (43%), Gaps = 29/359 (8%)
Query: 132 SKGEYWKRLRNKLSPT---FTSGKIKYMFPLIKKCSDQLITTIRKQIGESKQMSLEVKDY 188
S GE K+LR T F GK + + I++ + LI +R G +++ +
Sbjct: 97 SNGERAKQLRRFSIATLRDFGVGK-RGIEERIQEEAGFLIDALRGTGG----ANIDPTFF 151
Query: 189 CARYTTDVIGSTAFGIEINSLENPDSEFRQVSLLVMKPSVLQMLKAVLSELIPLIKYLNL 248
+R ++VI S FG + + D EF +SLL M + Q +L + +
Sbjct: 152 LSRTVSNVISSIVFG---DRFDYKDKEF--LSLLRMMLGIFQFTSTSTGQLYEMFSSVMK 206
Query: 249 KIFDPRISQF-----FSNLVKTNLSYREKN---NIKRDDFLNIMMQLQIAQRGKTLSPDD 300
+ P+ F + + + + ++ N RD + ++++Q ++ +
Sbjct: 207 HLPGPQQQAFQLLQGLEDFIAKKVEHNQRTLDPNSPRDFIDSFLIRMQEEEKNP-----N 261
Query: 301 VEMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTY 360
E + + F GG ET S+ L + L ++P++++K+ +EI K + +
Sbjct: 262 TEFYLKNLVMTTLQLFIGGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKF 321
Query: 361 EICHKMSYLDKVTKEALRMYPSLP-QLDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYD 419
E KM Y++ V E R +P L R K K D L GT++ ++ D
Sbjct: 322 EDRAKMPYMEAVIHEIQRFGDVIPMSLARRVKKDTKF--RDFFLPKGTEVYPMLGSVLRD 379
Query: 420 PEYYPDPEKFDPERFSPENIESRPHYTYLPFGDGPRNCIGMRFGTIQFKIGLAQLISNF 478
P ++ +P+ F+P+ F E + + ++PF G RNC G ++ + ++ NF
Sbjct: 380 PSFFSNPQDFNPQHFLNEKGQFKKSDAFVPFSIGKRNCFGEGLARMELFLFFTTVMQNF 438
>pdb|1Z10|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z11|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|2FDU|A Chain A, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|B Chain B, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|C Chain C, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|D Chain D, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|A Chain A, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|B Chain B, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|C Chain C, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|D Chain D, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDY|A Chain A, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|B Chain B, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|C Chain C, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|D Chain D, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|3T3R|A Chain A, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|B Chain B, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|C Chain C, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|D Chain D, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|4EJJ|A Chain A, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|B Chain B, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|C Chain C, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|D Chain D, Human Cytochrome P450 2a6 In Complex With Nicotine
Length = 476
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 82/359 (22%), Positives = 155/359 (43%), Gaps = 29/359 (8%)
Query: 132 SKGEYWKRLRNKLSPT---FTSGKIKYMFPLIKKCSDQLITTIRKQIGESKQMSLEVKDY 188
S GE K+LR T F GK + + I++ + LI +R G +++ +
Sbjct: 97 SNGERAKQLRRFSIATLRDFGVGK-RGIEERIQEEAGFLIDALRGTGG----ANIDPTFF 151
Query: 189 CARYTTDVIGSTAFGIEINSLENPDSEFRQVSLLVMKPSVLQMLKAVLSELIPLIKYLNL 248
+R ++VI S FG + + D EF +SLL M + Q +L + +
Sbjct: 152 LSRTVSNVISSIVFG---DRFDYKDKEF--LSLLRMMLGIFQFTSTSTGQLYEMFSSVMK 206
Query: 249 KIFDPRISQF-----FSNLVKTNLSYREKN---NIKRDDFLNIMMQLQIAQRGKTLSPDD 300
+ P+ F + + + + ++ N RD + ++++Q ++ +
Sbjct: 207 HLPGPQQQAFQLLQGLEDFIAKKVEHNQRTLDPNSPRDFIDSFLIRMQEEEKNP-----N 261
Query: 301 VEMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTY 360
E + + F GG ET S+ L + L ++P++++K+ +EI K + +
Sbjct: 262 TEFYLKNLVMTTLNLFIGGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKF 321
Query: 361 EICHKMSYLDKVTKEALRMYPSLP-QLDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYD 419
E KM Y++ V E R +P L R K K D L GT++ ++ D
Sbjct: 322 EDRAKMPYMEAVIHEIQRFGDVIPMSLARRVKKDTKF--RDFFLPKGTEVYPMLGSVLRD 379
Query: 420 PEYYPDPEKFDPERFSPENIESRPHYTYLPFGDGPRNCIGMRFGTIQFKIGLAQLISNF 478
P ++ +P+ F+P+ F E + + ++PF G RNC G ++ + ++ NF
Sbjct: 380 PSFFSNPQDFNPQHFLNEKGQFKKSDAFVPFSIGKRNCFGEGLARMELFLFFTTVMQNF 438
>pdb|2PG7|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
Length = 476
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 82/359 (22%), Positives = 155/359 (43%), Gaps = 29/359 (8%)
Query: 132 SKGEYWKRLRNKLSPT---FTSGKIKYMFPLIKKCSDQLITTIRKQIGESKQMSLEVKDY 188
S GE K+LR T F GK + + I++ + LI +R G +++ +
Sbjct: 97 SNGERAKQLRRFSIATLRDFGVGK-RGIEERIQEEAGFLIDALRGTGG----ANIDPTFF 151
Query: 189 CARYTTDVIGSTAFGIEINSLENPDSEFRQVSLLVMKPSVLQMLKAVLSELIPLIKYLNL 248
+R ++VI S FG + + D EF +SLL M + Q +L + +
Sbjct: 152 LSRTVSNVISSIVFG---DRFDYKDKEF--LSLLRMMLGIFQFTSTSTGQLYEMFSSVMK 206
Query: 249 KIFDPRISQF-----FSNLVKTNLSYREKN---NIKRDDFLNIMMQLQIAQRGKTLSPDD 300
+ P+ F + + + + ++ N RD + ++++Q ++ +
Sbjct: 207 HLPGPQQQAFQLLQGLEDFIAKKVEHNQRTLDPNSPRDFIDSFLIRMQEEEKNP-----N 261
Query: 301 VEMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTY 360
E + + F GG ET S+ L + L ++P++++K+ +EI K + +
Sbjct: 262 TEFYLKNLVMTTLQLFVGGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKF 321
Query: 361 EICHKMSYLDKVTKEALRMYPSLP-QLDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYD 419
E KM Y++ V E R +P L R K K D L GT++ ++ D
Sbjct: 322 EDRAKMPYMEAVIHEIQRFGDVIPMSLARRVKKDTKF--RDFFLPKGTEVYPMLGSVLRD 379
Query: 420 PEYYPDPEKFDPERFSPENIESRPHYTYLPFGDGPRNCIGMRFGTIQFKIGLAQLISNF 478
P ++ +P+ F+P+ F E + + ++PF G RNC G ++ + ++ NF
Sbjct: 380 PSFFSNPQDFNPQHFLNEKGQFKKSDAFVPFSIGKRNCFGEGLARMELFLFFTTVMQNF 438
>pdb|3EBS|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3T3Q|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
Length = 476
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 82/359 (22%), Positives = 154/359 (42%), Gaps = 29/359 (8%)
Query: 132 SKGEYWKRLRNKLSPT---FTSGKIKYMFPLIKKCSDQLITTIRKQIGESKQMSLEVKDY 188
S GE K+LR T F GK + + I++ + LI +R G +++ +
Sbjct: 97 SNGERAKQLRRFSIATLRDFGVGK-RGIEERIQEEAGFLIDALRGTGG----ANIDPTFF 151
Query: 189 CARYTTDVIGSTAFGIEINSLENPDSEFRQVSLLVMKPSVLQMLKAVLSELIPLIKYLNL 248
+R ++VI S FG + + D EF +SLL M Q +L + +
Sbjct: 152 LSRTVSNVISSIVFG---DRFDYKDKEF--LSLLRMMLGSFQFTSTSTGQLYEMFSSVMK 206
Query: 249 KIFDPRISQF-----FSNLVKTNLSYREKN---NIKRDDFLNIMMQLQIAQRGKTLSPDD 300
+ P+ F + + + + ++ N RD + ++++Q ++ +
Sbjct: 207 HLPGPQQQAFQLLQGLEDFIAKKVEHNQRTLDPNSPRDFIDSFLIRMQEEEKNP-----N 261
Query: 301 VEMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTY 360
E + + FF G ET S+ L + L ++P++++K+ +EI K + +
Sbjct: 262 TEFYLKNLVMTTLNLFFAGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKF 321
Query: 361 EICHKMSYLDKVTKEALRMYPSLPQ-LDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYD 419
E KM Y++ V E R +P L R K K D L GT++ ++ D
Sbjct: 322 EDRAKMPYMEAVIHEIQRFGDVIPMGLARRVKKDTKF--RDFFLPKGTEVYPMLGSVLRD 379
Query: 420 PEYYPDPEKFDPERFSPENIESRPHYTYLPFGDGPRNCIGMRFGTIQFKIGLAQLISNF 478
P ++ +P+ F+P+ F E + + ++PF G RNC G ++ + ++ NF
Sbjct: 380 PSFFSNPQDFNPQHFLNEKGQFKKSDAFVPFSIGKRNCFGEGLARMELFLFFTTVMQNF 438
>pdb|3P99|A Chain A, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|B Chain B, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|C Chain C, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|D Chain D, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
Length = 453
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 88/192 (45%), Gaps = 24/192 (12%)
Query: 299 DDVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQ--SKLRQEIMATKKKEG 356
D M+ + F G TSS T+ + L +++ LR+EI ++
Sbjct: 244 DGTPMSLHEVCGMIVAAMFAGQHTSSITTTWSMLHLMHPANVKHLEALRKEI---EEFPA 300
Query: 357 ELTYE-ICHKMSYLDKVTKEALRMYPSLPQLDR-----ISVKKYKLPNTDLTLDVGTKIS 410
+L Y + +M + ++ +E++R P L L R + V Y +P D+ I+
Sbjct: 301 QLNYNNVMDEMPFAERCARESIRRDPPLLMLMRKVMADVKVGSYVVPKGDI-------IA 353
Query: 411 IPTFAIHYDPEYYPDPEKFDPERFSPENIESRPHYTYLPFGDGPRNCIGMRFGTIQFKIG 470
H+D E +P+P ++DPER E +E ++ FG G CIG +FG +Q K
Sbjct: 354 CSPLLSHHDEEAFPEPRRWDPER--DEKVEG----AFIGFGAGVHKCIGQKFGLLQVKTI 407
Query: 471 LAQLISNFEFSI 482
LA +++F +
Sbjct: 408 LATAFRSYDFQL 419
>pdb|2X2N|A Chain A, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|B Chain B, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|C Chain C, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|D Chain D, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
Length = 475
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 88/192 (45%), Gaps = 24/192 (12%)
Query: 299 DDVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQ--SKLRQEIMATKKKEG 356
D M+ + F G TSS T+ + L +++ LR+EI ++
Sbjct: 258 DGTPMSLHEVCGMIVAAMFAGQHTSSITTTWSMLHLMHPANVKHLEALRKEI---EEFPA 314
Query: 357 ELTYE-ICHKMSYLDKVTKEALRMYPSLPQLDR-----ISVKKYKLPNTDLTLDVGTKIS 410
+L Y + +M + ++ +E++R P L L R + V Y +P D+ I+
Sbjct: 315 QLNYNNVMDEMPFAERCARESIRRDPPLLMLMRKVMADVKVGSYVVPKGDI-------IA 367
Query: 411 IPTFAIHYDPEYYPDPEKFDPERFSPENIESRPHYTYLPFGDGPRNCIGMRFGTIQFKIG 470
H+D E +P+P ++DPER E +E ++ FG G CIG +FG +Q K
Sbjct: 368 CSPLLSHHDEEAFPEPRRWDPER--DEKVEG----AFIGFGAGVHKCIGQKFGLLQVKTI 421
Query: 471 LAQLISNFEFSI 482
LA +++F +
Sbjct: 422 LATAFRSYDFQL 433
>pdb|3TIK|A Chain A, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|B Chain B, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|C Chain C, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|D Chain D, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
Length = 454
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 88/192 (45%), Gaps = 24/192 (12%)
Query: 299 DDVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQ--SKLRQEIMATKKKEG 356
D M+ + F G TSS T+ + L +++ LR+EI ++
Sbjct: 245 DGTPMSLHEVCGMIVAAMFAGQHTSSITTTWSMLHLMHPANVKHLEALRKEI---EEFPA 301
Query: 357 ELTYE-ICHKMSYLDKVTKEALRMYPSLPQLDR-----ISVKKYKLPNTDLTLDVGTKIS 410
+L Y + +M + ++ +E++R P L L R + V Y +P D+ I+
Sbjct: 302 QLNYNNVMDEMPFAERCARESIRRDPPLLMLMRKVMADVKVGSYVVPKGDI-------IA 354
Query: 411 IPTFAIHYDPEYYPDPEKFDPERFSPENIESRPHYTYLPFGDGPRNCIGMRFGTIQFKIG 470
H+D E +P+P ++DPER E +E ++ FG G CIG +FG +Q K
Sbjct: 355 CSPLLSHHDEEAFPEPRRWDPER--DEKVEG----AFIGFGAGVHKCIGQKFGLLQVKTI 408
Query: 471 LAQLISNFEFSI 482
LA +++F +
Sbjct: 409 LATAFRSYDFQL 420
>pdb|3GW9|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
Length = 450
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 88/192 (45%), Gaps = 24/192 (12%)
Query: 299 DDVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQ--SKLRQEIMATKKKEG 356
D M+ + F G TSS T+ + L +++ LR+EI ++
Sbjct: 245 DGTPMSLHEVCGMIVAAMFAGQHTSSITTTWSMLHLMHPANVKHLEALRKEI---EEFPA 301
Query: 357 ELTYE-ICHKMSYLDKVTKEALRMYPSLPQLDR-----ISVKKYKLPNTDLTLDVGTKIS 410
+L Y + +M + ++ +E++R P L L R + V Y +P D+ I+
Sbjct: 302 QLNYNNVMDEMPFAERCARESIRRDPPLLMLMRKVMADVKVGSYVVPKGDI-------IA 354
Query: 411 IPTFAIHYDPEYYPDPEKFDPERFSPENIESRPHYTYLPFGDGPRNCIGMRFGTIQFKIG 470
H+D E +P+P ++DPER E +E ++ FG G CIG +FG +Q K
Sbjct: 355 CSPLLSHHDEEAFPEPRRWDPER--DEKVEG----AFIGFGAGVHKCIGQKFGLLQVKTI 408
Query: 471 LAQLISNFEFSI 482
LA +++F +
Sbjct: 409 LATAFRSYDFQL 420
>pdb|3G1Q|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
Length = 450
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 88/192 (45%), Gaps = 24/192 (12%)
Query: 299 DDVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQ--SKLRQEIMATKKKEG 356
D M+ + F G TSS T+ + L +++ LR+EI ++
Sbjct: 246 DGTPMSLHEVCGMIVAAMFAGQHTSSITTTWSMLHLMHPANVKHLEALRKEI---EEFPA 302
Query: 357 ELTYE-ICHKMSYLDKVTKEALRMYPSLPQLDR-----ISVKKYKLPNTDLTLDVGTKIS 410
+L Y + +M + ++ +E++R P L L R + V Y +P D+ I+
Sbjct: 303 QLNYNNVMDEMPFAERCARESIRRDPPLLMLMRKVMADVKVGSYVVPKGDI-------IA 355
Query: 411 IPTFAIHYDPEYYPDPEKFDPERFSPENIESRPHYTYLPFGDGPRNCIGMRFGTIQFKIG 470
H+D E +P+P ++DPER E +E ++ FG G CIG +FG +Q K
Sbjct: 356 CSPLLSHHDEEAFPEPRRWDPER--DEKVEG----AFIGFGAGVHKCIGQKFGLLQVKTI 409
Query: 471 LAQLISNFEFSI 482
LA +++F +
Sbjct: 410 LATAFRSYDFQL 421
>pdb|2WV2|A Chain A, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Brucei In Complex With Fluconazole
Length = 475
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 88/192 (45%), Gaps = 24/192 (12%)
Query: 299 DDVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQ--SKLRQEIMATKKKEG 356
D M+ + F G TSS T+ + L +++ LR+EI ++
Sbjct: 258 DGTPMSLHEVCGMIVAAMFAGQHTSSITTTWSMLHLMHPANVKHLEALRKEI---EEFPA 314
Query: 357 ELTYE-ICHKMSYLDKVTKEALRMYPSLPQLDR-----ISVKKYKLPNTDLTLDVGTKIS 410
+L Y + +M + ++ +E++R P L L R + V Y +P D+ I+
Sbjct: 315 QLNYNNVMDEMPFAERCARESIRRDPPLLMLMRKVMADVKVGSYVVPKGDI-------IA 367
Query: 411 IPTFAIHYDPEYYPDPEKFDPERFSPENIESRPHYTYLPFGDGPRNCIGMRFGTIQFKIG 470
H+D E +P+P ++DPER E +E ++ FG G CIG +FG +Q K
Sbjct: 368 CSPLLSHHDEEAFPEPRRWDPER--DEKVEG----AFIGFGAGVHKCIGQKFGLLQVKTI 421
Query: 471 LAQLISNFEFSI 482
LA +++F +
Sbjct: 422 LATAFRSYDFQL 433
>pdb|3L4D|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
Length = 453
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 89/192 (46%), Gaps = 23/192 (11%)
Query: 299 DDVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYEL--ARNPDIQSKLRQEIMATKKKEG 356
D M+ + F G TS+ T+ L L RN +KL QEI +
Sbjct: 244 DGTRMSQHEVCGMIVAAMFAGQHTSTITTTWSLLHLMDPRNKRHLAKLHQEI---DEFPA 300
Query: 357 ELTYE-ICHKMSYLDKVTKEALRMYPSLPQLDR-----ISVKKYKLPNTDLTLDVGTKIS 410
+L Y+ + +M + ++ +E++R P L L R + V KY +P D+ I+
Sbjct: 301 QLNYDNVMEEMPFAEQCARESIRRDPPLVMLMRKVLKPVQVGKYVVPEGDI-------IA 353
Query: 411 IPTFAIHYDPEYYPDPEKFDPERFSPENIESRPHYTYLPFGDGPRNCIGMRFGTIQFKIG 470
H D E +P+P +++PER N++ + FG G CIG +FG +Q K
Sbjct: 354 CSPLLSHQDEEAFPNPREWNPER----NMKLV-DGAFCGFGAGVHKCIGEKFGLLQVKTV 408
Query: 471 LAQLISNFEFSI 482
LA ++ +++F +
Sbjct: 409 LATVLRDYDFEL 420
>pdb|3CZH|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
pdb|3CZH|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
Length = 481
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 79/168 (47%), Gaps = 13/168 (7%)
Query: 318 GGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSYLDKVTKEAL 377
G ET+++VL + + +A P+IQ ++++EI G+ +++ KM Y + V E L
Sbjct: 284 AGTETTTNVLRWAILFMALYPNIQGQVQKEIDLIMGPNGKPSWDDKCKMPYTEAVLHEVL 343
Query: 378 RMYPSLP------QLDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPEYYPDPEKFDP 431
R +P + V+ Y +P GT + +++H+D +Y+ DPE F P
Sbjct: 344 RFCNIVPLGIFHATSEDAVVRGYSIPK-------GTTVITNLYSVHFDEKYWRDPEVFHP 396
Query: 432 ERFSPENIESRPHYTYLPFGDGPRNCIGMRFGTIQFKIGLAQLISNFE 479
ERF + +PF G R+C+G ++ + L+ F
Sbjct: 397 ERFLDSSGYFAKKEALVPFSLGRRHCLGEHLARMEMFLFFTALLQRFH 444
>pdb|3C6G|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3C6G|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3DL9|A Chain A, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
pdb|3DL9|B Chain B, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
Length = 479
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 79/168 (47%), Gaps = 13/168 (7%)
Query: 318 GGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSYLDKVTKEAL 377
G ET+++VL + + +A P+IQ ++++EI G+ +++ KM Y + V E L
Sbjct: 284 AGTETTTNVLRWAILFMALYPNIQGQVQKEIDLIMGPNGKPSWDDKCKMPYTEAVLHEVL 343
Query: 378 RMYPSLP------QLDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPEYYPDPEKFDP 431
R +P + V+ Y +P GT + +++H+D +Y+ DPE F P
Sbjct: 344 RFCNIVPLGIFHATSEDAVVRGYSIPK-------GTTVITNLYSVHFDEKYWRDPEVFHP 396
Query: 432 ERFSPENIESRPHYTYLPFGDGPRNCIGMRFGTIQFKIGLAQLISNFE 479
ERF + +PF G R+C+G ++ + L+ F
Sbjct: 397 ERFLDSSGYFAKKEALVPFSLGRRHCLGEHLARMEMFLFFTALLQRFH 444
>pdb|2P85|A Chain A, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|B Chain B, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|C Chain C, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|D Chain D, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|E Chain E, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|F Chain F, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|3T3S|A Chain A, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|B Chain B, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|C Chain C, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|D Chain D, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|E Chain E, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|F Chain F, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|G Chain G, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|H Chain H, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|4EJG|A Chain A, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|B Chain B, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|C Chain C, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|D Chain D, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|E Chain E, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|F Chain F, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|G Chain G, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|H Chain H, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJH|A Chain A, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|B Chain B, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|C Chain C, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|D Chain D, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|E Chain E, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|F Chain F, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|G Chain G, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|H Chain H, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJI|A Chain A, Human Cytochrome P450 2a13 In Complex With Two Molecules
Of 4- (Methylnitrosamino)-1-(3-Puridyl)-1-Butanone
Length = 476
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 80/360 (22%), Positives = 150/360 (41%), Gaps = 27/360 (7%)
Query: 132 SKGEYWKRLRNKLSPT---FTSGKIKYMFPLIKKCSDQLITTIRKQIGESKQMSLEVKDY 188
S GE K+LR T F GK + + I++ + LI +R G +++ +
Sbjct: 97 SNGERAKQLRRFSIATLRGFGVGK-RGIEERIQEEAGFLIDALRGTHG----ANIDPTFF 151
Query: 189 CARYTTDVIGSTAFGIEINSLENPDSEFRQVSLLVMKPSVLQMLKAVLSELIPLIKYLNL 248
+R ++VI S FG + + D EF +SLL M Q +L + +
Sbjct: 152 LSRTVSNVISSIVFG---DRFDYEDKEF--LSLLRMMLGSFQFTATSTGQLYEMFSSVMK 206
Query: 249 KIFDPRISQF-----FSNLVKTNLSYREKN---NIKRDDFLNIMMQLQIAQRGKTLSPDD 300
+ P+ F + + + + ++ N RD + ++++Q ++ +
Sbjct: 207 HLPGPQQQAFKELQGLEDFIAKKVEHNQRTLDPNSPRDFIDSFLIRMQEEEKNP-----N 261
Query: 301 VEMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTY 360
E + + FF G ET S+ L + L ++P++++K+ +EI K + +
Sbjct: 262 TEFYLKNLVMTTLNLFFAGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKF 321
Query: 361 EICHKMSYLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDP 420
E KM Y + V E R LP V K D L GT++ ++ DP
Sbjct: 322 EDRAKMPYTEAVIHEIQRFGDMLPMGLAHRVNK-DTKFRDFFLPKGTEVFPMLGSVLRDP 380
Query: 421 EYYPDPEKFDPERFSPENIESRPHYTYLPFGDGPRNCIGMRFGTIQFKIGLAQLISNFEF 480
++ +P F+P+ F + + + ++PF G R C G ++ + ++ NF F
Sbjct: 381 RFFSNPRDFNPQHFLDKKGQFKKSDAFVPFSIGKRYCFGEGLARMELFLFFTTIMQNFRF 440
>pdb|3LD6|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C Complex With Ketoconazole
pdb|3LD6|B Chain B, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C Complex With Ketoconazole
pdb|3JUS|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(Cyp51) In Complex With Econazole
pdb|3JUS|B Chain B, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(Cyp51) In Complex With Econazole
pdb|3JUV|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C
Length = 461
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 96/217 (44%), Gaps = 17/217 (7%)
Query: 270 REKNNIKRDDFLNIMMQLQIAQRGKTLSPDDVEMTDDVITAQSFVFFFGGYETSSSVLTF 329
R ++ K DD L ++ D +TDD + G TSS+ +
Sbjct: 223 RRQSQEKIDDILQTLLDATYK--------DGRPLTDDEVAGMLIGLLLAGQHTSSTTSAW 274
Query: 330 CLYELARNPDIQSK--LRQEIMATKKKEGELTYEICHKMSYLDKVTKEALRMYPSLPQLD 387
+ LAR+ +Q K L Q+ + + LTY+ ++ LD+ KE LR+ P + +
Sbjct: 275 MGFFLARDKTLQKKCYLEQKTVCGENLP-PLTYDQLKDLNLLDRCIKETLRLRPPIMIMM 333
Query: 388 RISVKKYKLPNT--DLTLDVGTKISIPTFAIHYDPEYYPDPEKFDPERFSPENIESRPHY 445
R++ + P T T+ G ++ + + + + F+P+R+ +N S +
Sbjct: 334 RMA----RTPQTVAGYTIPPGHQVCVSPTVNQRLKDSWVERLDFNPDRYLQDNPASGEKF 389
Query: 446 TYLPFGDGPRNCIGMRFGTIQFKIGLAQLISNFEFSI 482
Y+PFG G CIG F +Q K + ++ +EF +
Sbjct: 390 AYVPFGAGRHRCIGENFAYVQIKTIWSTMLRLYEFDL 426
>pdb|3E4E|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E4E|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E6I|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3E6I|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3GPH|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3GPH|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3KOH|A Chain A, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3KOH|B Chain B, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3LC4|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3LC4|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3T3Z|A Chain A, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|B Chain B, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|C Chain C, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|D Chain D, Human Cytochrome P450 2e1 In Complex With Pilocarpine
Length = 476
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 85/182 (46%), Gaps = 15/182 (8%)
Query: 304 TDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEIC 363
T D IT FF G ET+S+ L + L L + P+I+ KL +EI +
Sbjct: 264 TMDGITVTVADLFFAGTETTSTTLRYGLLILMKYPEIEEKLHEEIDRVIGPSRIPAIKDR 323
Query: 364 HKMSYLDKVTKEALRMYPSLP-----QLDRISV-KKYKLPNTDLTLDVGTKISIPTF-AI 416
+M Y+D V E R +P + R ++ + Y +P GT + +PT ++
Sbjct: 324 QEMPYMDAVVHEIQRFITLVPSNLPHEATRDTIFRGYLIPK-------GT-VVVPTLDSV 375
Query: 417 HYDPEYYPDPEKFDPERFSPENIESRPHYTYLPFGDGPRNCIGMRFGTIQFKIGLAQLIS 476
YD + +PDPEKF PE F EN + + + PF G R C G ++ + L ++
Sbjct: 376 LYDNQEFPDPEKFKPEHFLNENGKFKYSDYFKPFSTGKRVCAGEGLARMELFLLLCAILQ 435
Query: 477 NF 478
+F
Sbjct: 436 HF 437
>pdb|3QZ1|A Chain A, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|B Chain B, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|C Chain C, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|D Chain D, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
Length = 496
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 75/361 (20%), Positives = 155/361 (42%), Gaps = 35/361 (9%)
Query: 132 SKGEY---WKRLRNKLSPTFTSGKIKYMFPLIKKCSDQLITTIRKQIGESKQMSLEVKDY 188
S G+Y WK + G M P + + + + +R Q G + ++
Sbjct: 109 SLGDYSLLWKAHKKLTRSALLLGTRSSMEPWVDQLTQEFCERMRVQAGAP----VTIQKE 164
Query: 189 CARYTTDVIGSTAFGIEINSLENPDSEFRQVSLLVMKPSVLQMLKAVLSELIPLIKYL-N 247
+ T +I FG + ++L + + Q + +Q+L +++P +++ N
Sbjct: 165 FSLLTCSIICYLTFGNKEDTLVHAFHDCVQDLMKTWDHWSIQIL-----DMVPFLRFFPN 219
Query: 248 LKIFDPRISQFFSN---LVKTNLSYREKNNI--KRDDFLNIMMQLQIAQRGKTLSPDDVE 302
++ R+ Q N +V+ L +++ + + D + M+Q QR + +
Sbjct: 220 PGLW--RLKQAIENRDHMVEKQLRRHKESMVAGQWRDMTDYMLQGVGRQR---VEEGPGQ 274
Query: 303 MTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEI---MATKKKEGELT 359
+ + + F GG ET++S L++ + L +P+IQ +L++E+ + +T
Sbjct: 275 LLEGHVHMSVVDLFIGGTETTASTLSWAVAFLLHHPEIQRRLQEELDRELGPGASCSRVT 334
Query: 360 YEICHKMSYLDKVTKEALRMYPSLP-QLDRISVKKYKLPNTDLTLDVGTKISIPTF-AIH 417
Y+ ++ L+ E LR+ P +P L + + + D+ + + IP H
Sbjct: 335 YKDRARLPLLNATIAEVLRLRPVVPLALPHRTTRPSSIFGYDIPEGM---VVIPNLQGAH 391
Query: 418 YDPEYYPDPEKFDPERFSPENIESRPHYTYLPFGDGPRNCIGMRFGTIQFKIGLAQLISN 477
D + P +F P+RF +E + + L FG G R C+G ++ + LA+L+
Sbjct: 392 LDETVWEQPHEFRPDRF----LEPGANPSALAFGCGARVCLGESLARLELFVVLARLLQA 447
Query: 478 F 478
F
Sbjct: 448 F 448
>pdb|1OG2|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG2|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
Length = 475
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 85/193 (44%), Gaps = 15/193 (7%)
Query: 302 EMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYE 361
E T + + + F G ET+S+ L + L L ++P++ +K+++EI + +
Sbjct: 262 EFTIESLENTAVDLFGAGTETTSTTLRYALLLLLKHPEVTAKVQEEIERVIGRNRSPCMQ 321
Query: 362 ICHKMSYLDKVTKEALR----MYPSLPQLDRISVK--KYKLPNTDLTLDVGTKISIPTFA 415
M Y D V E R + SLP +K Y +P GT I I +
Sbjct: 322 DRSHMPYTDAVVHEVQRYIDLLPTSLPHAVTCDIKFRNYLIPK-------GTTILISLTS 374
Query: 416 IHYDPEYYPDPEKFDPERFSPENIESRPHYTYLPFGDGPRNCIGMRFGTIQFKIGLAQLI 475
+ +D + +P+PE FDP F E + ++PF G R C+G ++ + L ++
Sbjct: 375 VLHDNKEFPNPEMFDPHHFLDEGGNFKKSKYFMPFSAGKRICVGEALAGMELFLFLTSIL 434
Query: 476 SNFEFS--IDSAN 486
NF +D N
Sbjct: 435 QNFNLKSLVDPKN 447
>pdb|1R9O|A Chain A, Crystal Structure Of P4502c9 With Flurbiprofen Bound
Length = 477
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 82/183 (44%), Gaps = 13/183 (7%)
Query: 302 EMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYE 361
E T + + + F G ET+S+ L + L L ++P++ +K+++EI + +
Sbjct: 264 EFTIESLENTAVDLFGAGTETTSTTLRYALLLLLKHPEVTAKVQEEIERVIGRNRSPCMQ 323
Query: 362 ICHKMSYLDKVTKEALR----MYPSLPQLDRISVK--KYKLPNTDLTLDVGTKISIPTFA 415
M Y D V E R + SLP +K Y +P GT I I +
Sbjct: 324 DRSHMPYTDAVVHEVQRYIDLLPTSLPHAVTCDIKFRNYLIPK-------GTTILISLTS 376
Query: 416 IHYDPEYYPDPEKFDPERFSPENIESRPHYTYLPFGDGPRNCIGMRFGTIQFKIGLAQLI 475
+ +D + +P+PE FDP F E + ++PF G R C+G ++ + L ++
Sbjct: 377 VLHDNKEFPNPEMFDPHHFLDEGGNFKKSKYFMPFSAGKRICVGEALAGMELFLFLTSIL 436
Query: 476 SNF 478
NF
Sbjct: 437 QNF 439
>pdb|4I8V|A Chain A, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|B Chain B, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|C Chain C, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|D Chain D, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
Length = 491
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/262 (21%), Positives = 114/262 (43%), Gaps = 29/262 (11%)
Query: 237 SELIPLIKYL------NLKIFDPRISQFFSNLVKTNLSYREKNNIK--RDDFLNIMMQLQ 288
++ IP+++YL K + + F +VK + EK +I+ D + + Q
Sbjct: 207 ADFIPILRYLPNPSLNAFKDLNEKFYSFMQKMVKEHYKTFEKGHIRDITDSLIEHCQEKQ 266
Query: 289 IAQRGKTLSPDDVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEI 348
+ + +V+++D+ I F G++T ++ +++ L L NP +Q K+++E+
Sbjct: 267 LDENA------NVQLSDEKIINIVLDLFGAGFDTVTTAISWSLMYLVMNPRVQRKIQEEL 320
Query: 349 MATKKKEGELTYEICHKMSYLDKVTKEALRMYPSLP------QLDRISVKKYKLPNTDLT 402
+ + Y++ E R +P S+K + +P
Sbjct: 321 DTVIGRSRRPRLSDRSHLPYMEAFILETFRHSSFVPFTIPHSTTRDTSLKGFYIPK---- 376
Query: 403 LDVGTKISIPTFAIHYDPEYYPDPEKFDPERF-SPEN-IESRPHYTYLPFGDGPRNCIGM 460
G + + + I++D + + +P +F PERF +P+ I+ + FG G R CIG
Sbjct: 377 ---GRCVFVNQWQINHDQKLWVNPSEFLPERFLTPDGAIDKVLSEKVIIFGMGKRKCIGE 433
Query: 461 RFGTIQFKIGLAQLISNFEFSI 482
+ + LA L+ EFS+
Sbjct: 434 TIARWEVFLFLAILLQRVEFSV 455
>pdb|2HI4|A Chain A, Crystal Structure Of Human Microsomal P450 1a2 In Complex
With Alpha-Naphthoflavone
Length = 495
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 72/311 (23%), Positives = 132/311 (42%), Gaps = 44/311 (14%)
Query: 193 TTDVIGSTAFGIEINSLENPDSEFRQVSLLVMKPSVLQMLKAVLS-ELIPLIKYL----- 246
+VIG+ FG P+S +SL+ ++ + + P+++YL
Sbjct: 172 VANVIGAMCFGQHF-----PESSDEMLSLVKNTHEFVETASSGNPLDFFPILRYLPNPAL 226
Query: 247 -NLKIFDPRISQFFSNLVKTNLSYREKNNIKRDDFLNIMMQLQIAQRGK-TLSPDD--VE 302
K F+ R F V+ + +KN++ RD + + R L P + V
Sbjct: 227 QRFKAFNQRFLWFLQKTVQEHYQDFDKNSV-RDITGALFKHSKKGPRASGNLIPQEKIVN 285
Query: 303 MTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEI 362
+ +D+ F G++T ++ +++ L L P+IQ K+++E+ +E
Sbjct: 286 LVNDI--------FGAGFDTVTTAISWSLMYLVTKPEIQRKIQKELDTVIGRERRPRLSD 337
Query: 363 CHKMSYLDKVTKEALRMYPSLPQLDRISVKKYKLPNT---DLTLD---VGTK--ISIPTF 414
++ YL+ E R LP + +P++ D TL+ + K + + +
Sbjct: 338 RPQLPYLEAFILETFRHSSFLP---------FTIPHSTTRDTTLNGFYIPKKCCVFVNQW 388
Query: 415 AIHYDPEYYPDPEKFDPERFSPEN---IESRPHYTYLPFGDGPRNCIGMRFGTIQFKIGL 471
+++DPE + DP +F PERF + I + FG G R CIG + + L
Sbjct: 389 QVNHDPELWEDPSEFRPERFLTADGTAINKPLSEKMMLFGMGKRRCIGEVLAKWEIFLFL 448
Query: 472 AQLISNFEFSI 482
A L+ EFS+
Sbjct: 449 AILLQQLEFSV 459
>pdb|3SN5|A Chain A, Crystal Structure Of Human Cyp7a1 In Complex With
Cholest-4-En-3-One
pdb|3SN5|B Chain B, Crystal Structure Of Human Cyp7a1 In Complex With
Cholest-4-En-3-One
pdb|3V8D|A Chain A, Crystal Structure Of Human Cyp7a1 In Complex With
7-Ketocholesterol
pdb|3V8D|B Chain B, Crystal Structure Of Human Cyp7a1 In Complex With
7-Ketocholesterol
Length = 491
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/268 (22%), Positives = 118/268 (44%), Gaps = 36/268 (13%)
Query: 249 KIFDPRISQFFSNLVKTNLSYREK-------NNIKRDDFLNIMMQLQIAQRGKTLSPDDV 301
K+F ++ ++ +T + REK N+++ + ++ ++ L++ D +
Sbjct: 197 KVFPALVAGLPIHMFRTAHNAREKLAESLRHENLQKRESISELISLRM------FLNDTL 250
Query: 302 EMTDDVITAQSFVFFFGGYETSSSVLTF-CLYELARNPDIQSKLRQEIMATKKKEGE--- 357
DD+ A++ + + ++ TF L+++ RNP+ +E+ T + G+
Sbjct: 251 STFDDLEKAKTHLVVLWASQANTIPATFWSLFQMIRNPEAMKAATEEVKRTLENAGQKVS 310
Query: 358 -------LTYEICHKMSYLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKIS 410
L+ + + LD + KE+LR+ + + R + + + L D + ++
Sbjct: 311 LEGNPICLSQAELNDLPVLDSIIKESLRLSSASLNI-RTAKEDFTLHLEDGSYNIRKDDI 369
Query: 411 IPTFA--IHYDPEYYPDPEKFDPERFSPENIESRP---------HYTYLPFGDGPRNCIG 459
I + +H DPE YPDP F +R+ EN +++ Y Y+PFG G C G
Sbjct: 370 IALYPQLMHLDPEIYPDPLTFKYDRYLDENGKTKTTFYCNGLKLKYYYMPFGSGATICPG 429
Query: 460 MRFGTIQFKIGLAQLISNFEFSIDSANA 487
F + K L ++S FE + A
Sbjct: 430 RLFAIHEIKQFLILMLSYFELELIEGQA 457
>pdb|3DAX|A Chain A, Crystal Structure Of Human Cyp7a1
pdb|3DAX|B Chain B, Crystal Structure Of Human Cyp7a1
Length = 491
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/268 (22%), Positives = 118/268 (44%), Gaps = 36/268 (13%)
Query: 249 KIFDPRISQFFSNLVKTNLSYREK-------NNIKRDDFLNIMMQLQIAQRGKTLSPDDV 301
K+F ++ ++ +T + REK N+++ + ++ ++ L++ D +
Sbjct: 197 KVFPALVAGLPIHMFRTAHNAREKLAESLRHENLQKRESISELISLRM------FLNDTL 250
Query: 302 EMTDDVITAQSFVFFFGGYETSSSVLTF-CLYELARNPDIQSKLRQEIMATKKKEGE--- 357
DD+ A++ + + ++ TF L+++ RNP+ +E+ T + G+
Sbjct: 251 STFDDLEKAKTHLVVLWASQANTIPATFWSLFQMIRNPEAMKAATEEVKRTLENAGQKVS 310
Query: 358 -------LTYEICHKMSYLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKIS 410
L+ + + LD + KE+LR+ + + R + + + L D + ++
Sbjct: 311 LEGNPICLSQAELNDLPVLDSIIKESLRLSSASLNI-RTAKEDFTLHLEDGSYNIRKDDI 369
Query: 411 IPTFA--IHYDPEYYPDPEKFDPERFSPENIESRP---------HYTYLPFGDGPRNCIG 459
I + +H DPE YPDP F +R+ EN +++ Y Y+PFG G C G
Sbjct: 370 IALYPQLMHLDPEIYPDPLTFKYDRYLDENGKTKTTFYCNGLKLKYYYMPFGSGATICPG 429
Query: 460 MRFGTIQFKIGLAQLISNFEFSIDSANA 487
F + K L ++S FE + A
Sbjct: 430 RLFAIHEIKQFLILMLSYFELELIEGQA 457
>pdb|3KHM|A Chain A, Crystal Structure Of Sterol 14alpha-Demethylase (Cyp51)
From Trypanosoma Cruzi In Complex With Inhibitor
Fluconazole
Length = 464
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/269 (22%), Positives = 113/269 (42%), Gaps = 36/269 (13%)
Query: 230 QMLKAVLSELIPLIKYLNLKIFDP-----RISQFFSNLVKT---NLSYREKNNIKRDDFL 281
Q+L + S LIP ++ + P R + + L K + REK +D+
Sbjct: 176 QLLSKMESSLIPAAVFMPWLLRLPLPQSARCREARAELQKILGEIIVAREKEEASKDNNT 235
Query: 282 NIMMQLQIAQRGKTLSPDDVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYEL--ARNPD 339
+ ++ + K + D M+ + F G TS+ ++ + L +N
Sbjct: 236 SDLLGGLL----KAVYRDGTRMSLHEVCGMIVAAMFAGQHTSTITTSWSMLHLMHPKNKK 291
Query: 340 IQSKLRQEIMATKKKEGELTYE-ICHKMSYLDKVTKEALRMYPSLPQLDR-----ISVKK 393
KL +EI + +L Y+ + +M + ++ +E++R P L + R + V
Sbjct: 292 WLDKLHKEI---DEFPAQLNYDNVMDEMPFAERCVRESIRRDPPLLMVMRMVKAEVKVGS 348
Query: 394 YKLPNTDLTLDVGTKISIPTFAIHYDPEYYPDPEKFDPERFSPENIESRPHYTYLPFGDG 453
Y +P D+ I+ H+D E +P+P +DPER + + ++ FG G
Sbjct: 349 YVVPKGDI-------IACSPLLSHHDEEAFPNPRLWDPER------DEKVDGAFIGFGAG 395
Query: 454 PRNCIGMRFGTIQFKIGLAQLISNFEFSI 482
CIG +F +Q K LA ++F +
Sbjct: 396 VHKCIGQKFALLQVKTILATAFREYDFQL 424
>pdb|4GQS|A Chain A, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|B Chain B, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|C Chain C, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|D Chain D, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
Length = 477
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 81/178 (45%), Gaps = 15/178 (8%)
Query: 307 VITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKM 366
VITA + G ET+S+ L + L L ++P++ +K+++EI + + M
Sbjct: 271 VITAADLLG--AGTETTSTTLRYALLLLLKHPEVTAKVQEEIERVVGRNRSPCMQDRGHM 328
Query: 367 SYLDKVTKEALR---MYP-SLPQLDRISVK--KYKLPNTDLTLDVGTKISIPTFAIHYDP 420
Y D V E R + P SLP VK Y +P GT I ++ +D
Sbjct: 329 PYTDAVVHEVQRYIDLIPTSLPHAVTCDVKFRNYLIPK-------GTTILTSLTSVLHDN 381
Query: 421 EYYPDPEKFDPERFSPENIESRPHYTYLPFGDGPRNCIGMRFGTIQFKIGLAQLISNF 478
+ +P+PE FDP F E + ++PF G R C+G ++ + L ++ NF
Sbjct: 382 KEFPNPEMFDPRHFLDEGGNFKKSNYFMPFSAGKRICVGEGLARMELFLFLTFILQNF 439
>pdb|3IBD|A Chain A, Crystal Structure Of A Cytochrome P450 2b6 Genetic Variant
In Complex With The Inhibitor
4-(4-Chlorophenyl)imidazole
pdb|3QOA|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-Benzylpyridine.
pdb|3QU8|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|B Chain B, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|C Chain C, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|D Chain D, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|E Chain E, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|F Chain F, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3UA5|A Chain A, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
pdb|3UA5|B Chain B, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
Length = 476
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 95/416 (22%), Positives = 162/416 (38%), Gaps = 52/416 (12%)
Query: 89 PKLMVTDPELYKYILIKDFDHFVDRGIGESDAKRDPI---EGHLFGSKGEYWKRLRNKLS 145
P +M+ E + L+ + F RG A DP G +F + G WK LR + S
Sbjct: 55 PVVMLCGVEAIREALVDKAEAFSGRG---KIAMVDPFFRGYGVIF-ANGNRWKVLR-RFS 109
Query: 146 PT----FTSGKIKYMFPLIKKCSDQLITTIRKQIGESKQMSLEVKDYCARYTTDVIGSTA 201
T F GK + + I++ + LI +RK SK ++ T ++I S
Sbjct: 110 VTTMRDFGMGK-RSVEERIQEEAQCLIEELRK----SKGALMDPTFLFQSITANIICSIV 164
Query: 202 FGIEINSLENPDSEFRQVSLLVMKPSVLQMLKAVLSELIPLIKYLNLKIFDPRISQFFSN 261
FG D EF + +L + ++ +V +L L LK F Q + N
Sbjct: 165 FG---KRFHYQDQEF--LKMLNLFYQTFSLISSVFGQLFELFSGF-LKHFPGAHRQVYKN 218
Query: 262 LVKTNL-------SYREK--NNIKRDDFLNIMMQLQIAQRGKTLSPDDVEMTDDVITAQS 312
L + N +RE + RD ++ ++ K S E + + +
Sbjct: 219 LQEINAYIGHSVEKHRETLDPSAPRDLIDTYLLHME-----KEKSNAHSEFSHQNLNLNT 273
Query: 313 FVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSYLDKV 372
FF G ET+S+ L + + + P + ++ +EI KM Y + V
Sbjct: 274 LSLFFAGTETTSTTLRYGFLLMLKYPHVAERVYREIEQVIGPHRPPELHDRAKMPYTEAV 333
Query: 373 TKEALRMYPSLPQ------LDRISVKKYKLP-NTDLTLDVGTKISIPTFAIHYDPEYYPD 425
E R LP S + Y +P +T++ L + T + +DP Y+
Sbjct: 334 IYEIQRFSDLLPMGVPHIVTQHTSFRGYIIPKDTEVFLILSTAL--------HDPHYFEK 385
Query: 426 PEKFDPERFSPENIESRPHYTYLPFGDGPRNCIGMRFGTIQFKIGLAQLISNFEFS 481
P+ F+P+ F N + ++PF G R C+G + + ++ NF +
Sbjct: 386 PDAFNPDHFLDANGALKKTEAFIPFSLGKRICLGEGIARAELFLFFTTILQNFSMA 441
>pdb|3K1O|A Chain A, Crystal Structure Of Sterol 14-alpha Demethylase (cyp51)
From Trypanosoma Cruzi In Complex With A Potential
Antichagasic Drug, Posaconazole
pdb|3KSW|A Chain A, Crystal Structure Of Sterol 14alpha-demethylase (cyp51)
From Trypanosoma Cruzi In Complex With An Inhibitor Vnf
((4-(4-
Chlorophenyl)-n-[2-(1h-imidazol-1-yl)-1-
phenylethyl]benzamide)
Length = 458
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 61/269 (22%), Positives = 113/269 (42%), Gaps = 36/269 (13%)
Query: 230 QMLKAVLSELIPLIKYLNLKIFDP-----RISQFFSNLVKT---NLSYREKNNIKRDDFL 281
Q+L + S LIP ++ + P R + + L K + REK +D+
Sbjct: 170 QLLSKMESSLIPAAVFMPWLLRLPLPQSARCREARAELQKILGEIIVAREKEEASKDNNT 229
Query: 282 NIMMQLQIAQRGKTLSPDDVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYEL--ARNPD 339
+ ++ + K + D M+ + F G TS+ ++ + L +N
Sbjct: 230 SDLLGGLL----KAVYRDGTRMSLHEVCGMIVAAMFAGQHTSTITTSWSMLHLMHPKNKK 285
Query: 340 IQSKLRQEIMATKKKEGELTYE-ICHKMSYLDKVTKEALRMYPSLPQLDR-----ISVKK 393
KL +EI + +L Y+ + +M + ++ +E++R P L + R + V
Sbjct: 286 WLDKLHKEI---DEFPAQLNYDNVMDEMPFAERCVRESIRRDPPLLMVMRMVKAEVKVGS 342
Query: 394 YKLPNTDLTLDVGTKISIPTFAIHYDPEYYPDPEKFDPERFSPENIESRPHYTYLPFGDG 453
Y +P D+ I+ H+D E +P+P +DPER + + ++ FG G
Sbjct: 343 YVVPKGDI-------IACSPLLSHHDEEAFPNPRLWDPER------DEKVDGAFIGFGAG 389
Query: 454 PRNCIGMRFGTIQFKIGLAQLISNFEFSI 482
CIG +F +Q K LA ++F +
Sbjct: 390 VHKCIGQKFALLQVKTILATAFREYDFQL 418
>pdb|2WUZ|A Chain A, X-Ray Structure Of Cyp51 From Trypanosoma Cruzi In Complex
With Fluconazole In Alternative Conformation
pdb|2WUZ|B Chain B, X-Ray Structure Of Cyp51 From Trypanosoma Cruzi In Complex
With Fluconazole In Alternative Conformation
pdb|2WX2|A Chain A, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Cruzi In Complex With Fluconazole
pdb|2WX2|B Chain B, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Cruzi In Complex With Fluconazole
Length = 473
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 85/197 (43%), Gaps = 24/197 (12%)
Query: 294 KTLSPDDVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYEL--ARNPDIQSKLRQEIMAT 351
K + D M+ + F G TS+ ++ + L +N KL +EI
Sbjct: 253 KAVYRDGTRMSLHEVCGMIVAAMFAGQHTSTITTSWSMLHLMHPKNKKWLDKLHKEI--- 309
Query: 352 KKKEGELTYE-ICHKMSYLDKVTKEALRMYPSLPQLDR-----ISVKKYKLPNTDLTLDV 405
+ +L Y+ + +M + ++ +E++R P L + R + V Y +P D+
Sbjct: 310 DEFPAQLNYDNVMDEMPFAERCVRESIRRDPPLLMVMRMVKAEVKVGSYVVPKGDI---- 365
Query: 406 GTKISIPTFAIHYDPEYYPDPEKFDPERFSPENIESRPHYTYLPFGDGPRNCIGMRFGTI 465
I+ H+D E +P+P +DPER + + ++ FG G CIG +F +
Sbjct: 366 ---IACSPLLSHHDEEAFPNPRLWDPER------DEKVDGAFIGFGAGVHKCIGQKFALL 416
Query: 466 QFKIGLAQLISNFEFSI 482
Q K LA ++F +
Sbjct: 417 QVKTILATAFREYDFQL 433
>pdb|1DT6|A Chain A, Structure Of Mammalian Cytochrome P450 2c5
pdb|1N6B|A Chain A, Microsomal Cytochrome P450 2c5/3lvdh Complex With A
Dimethyl Derivative Of Sulfaphenazole
pdb|1NR6|A Chain A, Microsomal Cytochrome P450 2c53LVDH COMPLEX WITH
DICLOFENAC
Length = 473
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 102/227 (44%), Gaps = 12/227 (5%)
Query: 255 ISQFFSNLVKTNLSYREKNNIKRDDFLNIMMQLQIAQRGKTLSPDDVEMTDDVITAQSFV 314
I F VK + + NN + DF++ + +++ Q +++E T + +
Sbjct: 222 IKNFIMEKVKEHQKLLDVNNPR--DFIDCFL-IKMEQE------NNLEFTLESLVIAVSD 272
Query: 315 FFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSYLDKVTK 374
F G ET+S+ L + L L ++P++ +++++EI + + +M Y D V
Sbjct: 273 LFGAGTETTSTTLRYSLLLLLKHPEVAARVQEEIERVIGRHRSPCMQDRSRMPYTDAVIH 332
Query: 375 EALRMYPSLP-QLDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPEYYPDPEKFDPER 433
E R LP L + + N + GT I ++ +D + +P+P+ FDP
Sbjct: 333 EIQRFIDLLPTNLPHAVTRDVRFRN--YFIPKGTDIITSLTSVLHDEKAFPNPKVFDPGH 390
Query: 434 FSPENIESRPHYTYLPFGDGPRNCIGMRFGTIQFKIGLAQLISNFEF 480
F E+ + ++PF G R C+G ++ + L ++ NF+
Sbjct: 391 FLDESGNFKKSDYFMPFSAGKRMCVGEGLARMELFLFLTSILQNFKL 437
>pdb|1Z8Q|A Chain A, Ferrous Dioxygen Complex Of The A245t Cytochrome P450eryf
Length = 404
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 76/366 (20%), Positives = 149/366 (40%), Gaps = 77/366 (21%)
Query: 139 RLRNKLSPTFTSGKIKYMFPLIKKCSDQLITTIRKQIGESKQMSLEVKDYCARYTTDVIG 198
RLR +S FT +++ M P +++ + +L+ ++G+S + + V + VI
Sbjct: 100 RLRKLVSQEFTVRRVEAMRPRVEQITAELL----DEVGDSGVVDI-VDRFAHPLPIKVI- 153
Query: 199 STAFGIEINSLENPDSEFRQVS--LLVMKPSVLQMLKAVLSELIPLIKYLNLKIFDPRIS 256
G++ E EF + S +LVM P + E++
Sbjct: 154 CELLGVD----EKYRGEFGRWSSEILVMDPERAEQRGQAAREVV---------------- 193
Query: 257 QFFSNLVKTNLSYREKNNIKRDDFLNIMMQLQIAQRGKTLSPDDVEMTDDVITAQSFVFF 316
F +LV+ + DD L+ ++++Q DD ++ D +T+ + V
Sbjct: 194 NFILDLVE------RRRTEPGDDLLSALIRVQ--------DDDDGRLSADELTSIALVLL 239
Query: 317 FGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSYLDKVTKEA 376
G+ETS S++ Y L +PD + +R++ A E+ I + +E
Sbjct: 240 LAGFETSVSLIGIGTYLLLTHPDQLALVRRDPSALPNAVEEILRYIAPPETTTRFAAEEV 299
Query: 377 LRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPEYYPDPEKFDPERFSP 436
++ +++ +Y + + + A + DP+ +PDP +FD R
Sbjct: 300 --------EIGGVAIPQY------------STVLVANGAANRDPKQFPDPHRFDVTR--- 336
Query: 437 ENIESRPHYTYLPFGDGPRNCIGMRFGTIQFKIGLAQLISNF---EFSIDSANATFEYLK 493
++R H L FG G C+G ++ ++ L L F ID+ + + +
Sbjct: 337 ---DTRGH---LSFGQGIHFCMGRPLAKLEGEVALRALFGRFPALSLGIDADDVVW---R 387
Query: 494 GSILLQ 499
S+LL+
Sbjct: 388 RSLLLR 393
>pdb|1EGY|A Chain A, Cytochrome P450eryf With 9-Aminophenanthrene Bound
pdb|1EUP|A Chain A, X-Ray Crystal Structure Of Cytochrome P450eryf With
Androstendione Bound
pdb|1JIN|A Chain A, P450eryfKETOCONAZOLE
pdb|1OXA|A Chain A, Cytochrome P450 (Donor:o2 Oxidoreductase)
Length = 403
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 77/373 (20%), Positives = 144/373 (38%), Gaps = 91/373 (24%)
Query: 139 RLRNKLSPTFTSGKIKYMFPLIKKCSDQLITTIRKQIGESKQMS--------LEVKDYCA 190
RLR +S FT +++ M P +++ + +L+ ++G+S + L +K C
Sbjct: 99 RLRKLVSQEFTVRRVEAMRPRVEQITAELL----DEVGDSGVVDIVDRFAHPLPIKVICE 154
Query: 191 RYTTDVIGSTAFGIEINSLENPDSEFRQVS-LLVMKPSVLQMLKAVLSELIPLIKYLNLK 249
D AFG R S +LVM P + E++
Sbjct: 155 LLGVDEAARGAFG-------------RWSSEILVMDPERAEQRGQAAREVV--------- 192
Query: 250 IFDPRISQFFSNLVKTNLSYREKNNIKRDDFLNIMMQLQIAQRGKTLSPDDVEMTDDVIT 309
F +LV+ + DD L+ ++ +Q DD ++ D +T
Sbjct: 193 -------NFILDLVE------RRRTEPGDDLLSALISVQ--------DDDDGRLSADELT 231
Query: 310 AQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSYL 369
+ + V G+E S S++ Y L +PD + +R + A EI ++
Sbjct: 232 SIALVLLLAGFEASVSLIGIGTYLLLTHPDQLALVRADPSALPNA----VEEILRYIAPP 287
Query: 370 DKVTKEALRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPEYYPDPEKF 429
+ T+ A ++ +++ +Y + + + A + DP +PDP +F
Sbjct: 288 ETTTRFAAEEV----EIGGVAIPQY------------STVLVANGAANRDPSQFPDPHRF 331
Query: 430 DPERFSPENIESRPHYTYLPFGDGPRNCIGMRFGTIQFKIGLAQLISNF---EFSIDSAN 486
D R ++R H L FG G C+G ++ ++ L L F ID+ +
Sbjct: 332 DVTR------DTRGH---LSFGQGIHFCMGRPLAKLEGEVALRALFGRFPALSLGIDADD 382
Query: 487 ATFEYLKGSILLQ 499
+ + S+LL+
Sbjct: 383 VVW---RRSLLLR 392
>pdb|1JIP|A Chain A, P450eryf(A245s)KETOCONAZOLE
Length = 403
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 76/366 (20%), Positives = 151/366 (41%), Gaps = 77/366 (21%)
Query: 139 RLRNKLSPTFTSGKIKYMFPLIKKCSDQLITTIRKQIGESKQMSLEVKDYCARYTTDVIG 198
RLR +S FT +++ M P +++ + +L+ ++G+S + + V + VI
Sbjct: 99 RLRKLVSQEFTVRRVEAMRPRVEQITAELL----DEVGDSGVVDI-VDRFAHPLPIKVI- 152
Query: 199 STAFGIEINSLENPDSEFRQVS--LLVMKPSVLQMLKAVLSELIPLIKYLNLKIFDPRIS 256
G++ E EF + S +LVM P + E++
Sbjct: 153 CELLGVD----EKYRGEFGRWSSEILVMDPERAEQRGQAAREVV---------------- 192
Query: 257 QFFSNLVKTNLSYREKNNIKRDDFLNIMMQLQIAQRGKTLSPDDVEMTDDVITAQSFVFF 316
F +LV+ + DD L+ ++++Q DD ++ D +T+ + V
Sbjct: 193 NFILDLVE------RRRTEPGDDLLSALIRVQ--------DDDDGRLSADELTSIALVLL 238
Query: 317 FGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSYLDKVTKEA 376
G+E+S S++ Y L +PD + +R++ A EI ++ + T+ A
Sbjct: 239 LAGFESSVSLIGIGTYLLLTHPDQLALVRRDPSALPNA----VEEILRYIAPPETTTRFA 294
Query: 377 LRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPEYYPDPEKFDPERFSP 436
++ +++ +Y + + + A + DP+ +PDP +FD R
Sbjct: 295 AEEV----EIGGVAIPQY------------STVLVANGAANRDPKQFPDPHRFDVTR--- 335
Query: 437 ENIESRPHYTYLPFGDGPRNCIGMRFGTIQFKIGLAQLISNF---EFSIDSANATFEYLK 493
++R H L FG G C+G ++ ++ L L F ID+ + + +
Sbjct: 336 ---DTRGH---LSFGQGIHFCMGRPLAKLEGEVALRALFGRFPALSLGIDADDVVW---R 386
Query: 494 GSILLQ 499
S+LL+
Sbjct: 387 RSLLLR 392
>pdb|1Z8P|A Chain A, Ferrous Dioxygen Complex Of The A245s Cytochrome P450eryf
Length = 404
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 75/366 (20%), Positives = 149/366 (40%), Gaps = 77/366 (21%)
Query: 139 RLRNKLSPTFTSGKIKYMFPLIKKCSDQLITTIRKQIGESKQMSLEVKDYCARYTTDVIG 198
RLR +S FT +++ M P +++ + +L+ ++G+S + + V + VI
Sbjct: 100 RLRKLVSQEFTVRRVEAMRPRVEQITAELL----DEVGDSGVVDI-VDRFAHPLPIKVI- 153
Query: 199 STAFGIEINSLENPDSEFRQVS--LLVMKPSVLQMLKAVLSELIPLIKYLNLKIFDPRIS 256
G++ E EF + S +LVM P + E++
Sbjct: 154 CELLGVD----EKYRGEFGRWSSEILVMDPERAEQRGQAAREVV---------------- 193
Query: 257 QFFSNLVKTNLSYREKNNIKRDDFLNIMMQLQIAQRGKTLSPDDVEMTDDVITAQSFVFF 316
F +LV+ + DD L+ ++++Q DD ++ D +T+ + V
Sbjct: 194 NFILDLVE------RRRTEPGDDLLSALIRVQ--------DDDDGRLSADELTSIALVLL 239
Query: 317 FGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSYLDKVTKEA 376
G+E+S S++ Y L +PD + +R++ A E+ I + +E
Sbjct: 240 LAGFESSVSLIGIGTYLLLTHPDQLALVRRDPSALPNAVEEILRYIAPPETTTRFAAEEV 299
Query: 377 LRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPEYYPDPEKFDPERFSP 436
++ +++ +Y + + + A + DP+ +PDP +FD R
Sbjct: 300 --------EIGGVAIPQY------------STVLVANGAANRDPKQFPDPHRFDVTR--- 336
Query: 437 ENIESRPHYTYLPFGDGPRNCIGMRFGTIQFKIGLAQLISNF---EFSIDSANATFEYLK 493
++R H L FG G C+G ++ ++ L L F ID+ + + +
Sbjct: 337 ---DTRGH---LSFGQGIHFCMGRPLAKLEGEVALRALFGRFPALSLGIDADDVVW---R 387
Query: 494 GSILLQ 499
S+LL+
Sbjct: 388 RSLLLR 393
>pdb|1JIO|A Chain A, P450eryf/6deb
Length = 403
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 75/366 (20%), Positives = 148/366 (40%), Gaps = 77/366 (21%)
Query: 139 RLRNKLSPTFTSGKIKYMFPLIKKCSDQLITTIRKQIGESKQMSLEVKDYCARYTTDVIG 198
RLR +S FT +++ M P +++ + +L+ ++G+S + + V + VI
Sbjct: 99 RLRKLVSQEFTVRRVEAMRPRVEQITAELL----DEVGDSGVVDI-VDRFAHPLPIKVI- 152
Query: 199 STAFGIEINSLENPDSEFRQVS--LLVMKPSVLQMLKAVLSELIPLIKYLNLKIFDPRIS 256
G++ E EF + S +LVM P + E++
Sbjct: 153 CELLGVD----EKYRGEFGRWSSEILVMDPERAEQRGQAAREVV---------------- 192
Query: 257 QFFSNLVKTNLSYREKNNIKRDDFLNIMMQLQIAQRGKTLSPDDVEMTDDVITAQSFVFF 316
F +LV+ + DD L+ ++++Q DD ++ D +T+ + V
Sbjct: 193 NFILDLVE------RRRTEPGDDLLSALIRVQ--------DDDDGRLSADELTSIALVLL 238
Query: 317 FGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSYLDKVTKEA 376
G+E S S++ Y L +PD + +R++ A E+ I + +E
Sbjct: 239 LAGFEASVSLIGIGTYLLLTHPDQLALVRRDPSALPNAVEEILRYIAPPETTTRFAAEEV 298
Query: 377 LRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPEYYPDPEKFDPERFSP 436
++ +++ +Y + + + A + DP+ +PDP +FD R
Sbjct: 299 --------EIGGVAIPQY------------STVLVANGAANRDPKQFPDPHRFDVTR--- 335
Query: 437 ENIESRPHYTYLPFGDGPRNCIGMRFGTIQFKIGLAQLISNF---EFSIDSANATFEYLK 493
++R H L FG G C+G ++ ++ L L F ID+ + + +
Sbjct: 336 ---DTRGH---LSFGQGIHFCMGRPLAKLEGEVALRALFGRFPALSLGIDADDVVW---R 386
Query: 494 GSILLQ 499
S+LL+
Sbjct: 387 RSLLLR 392
>pdb|1Z8O|A Chain A, Ferrous Dioxygen Complex Of The Wild-Type Cytochrome
P450eryf
Length = 404
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 75/366 (20%), Positives = 148/366 (40%), Gaps = 77/366 (21%)
Query: 139 RLRNKLSPTFTSGKIKYMFPLIKKCSDQLITTIRKQIGESKQMSLEVKDYCARYTTDVIG 198
RLR +S FT +++ M P +++ + +L+ ++G+S + + V + VI
Sbjct: 100 RLRKLVSQEFTVRRVEAMRPRVEQITAELL----DEVGDSGVVDI-VDRFAHPLPIKVI- 153
Query: 199 STAFGIEINSLENPDSEFRQVS--LLVMKPSVLQMLKAVLSELIPLIKYLNLKIFDPRIS 256
G++ E EF + S +LVM P + E++
Sbjct: 154 CELLGVD----EKYRGEFGRWSSEILVMDPERAEQRGQAAREVV---------------- 193
Query: 257 QFFSNLVKTNLSYREKNNIKRDDFLNIMMQLQIAQRGKTLSPDDVEMTDDVITAQSFVFF 316
F +LV+ + DD L+ ++++Q DD ++ D +T+ + V
Sbjct: 194 NFILDLVE------RRRTEPGDDLLSALIRVQ--------DDDDGRLSADELTSIALVLL 239
Query: 317 FGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSYLDKVTKEA 376
G+E S S++ Y L +PD + +R++ A E+ I + +E
Sbjct: 240 LAGFEASVSLIGIGTYLLLTHPDQLALVRRDPSALPNAVEEILRYIAPPETTTRFAAEEV 299
Query: 377 LRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPEYYPDPEKFDPERFSP 436
++ +++ +Y + + + A + DP+ +PDP +FD R
Sbjct: 300 --------EIGGVAIPQY------------STVLVANGAANRDPKQFPDPHRFDVTR--- 336
Query: 437 ENIESRPHYTYLPFGDGPRNCIGMRFGTIQFKIGLAQLISNF---EFSIDSANATFEYLK 493
++R H L FG G C+G ++ ++ L L F ID+ + + +
Sbjct: 337 ---DTRGH---LSFGQGIHFCMGRPLAKLEGEVALRALFGRFPALSLGIDADDVVW---R 387
Query: 494 GSILLQ 499
S+LL+
Sbjct: 388 RSLLLR 393
>pdb|1PQ2|A Chain A, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|1PQ2|B Chain B, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|2NNH|A Chain A, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNH|B Chain B, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNI|A Chain A, Cyp2c8dh Complexed With Montelukast
pdb|2NNJ|A Chain A, Cyp2c8dh Complexed With Felodipine
pdb|2VN0|A Chain A, Cyp2c8dh Complexed With Troglitazone
Length = 476
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 77/176 (43%), Gaps = 14/176 (7%)
Query: 315 FFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSYLDKVTK 374
F G ET+S+ L + L L ++P++ +K+++EI + + M Y D V
Sbjct: 276 LFVAGTETTSTTLRYGLLLLLKHPEVTAKVQEEIDHVIGRHRSPCMQDRSHMPYTDAVVH 335
Query: 375 EALRMYPSLPQLDRISV------KKYKLPNTDLTLDVGTKISIPTFAIHYDPEYYPDPEK 428
E R +P +V + Y +P GT I ++ +D + +P+P
Sbjct: 336 EIQRYSDLVPTGVPHAVTTDTKFRNYLIPK-------GTTIMALLTSVLHDDKEFPNPNI 388
Query: 429 FDPERFSPENIESRPHYTYLPFGDGPRNCIGMRFGTIQFKIGLAQLISNFEF-SID 483
FDP F +N + ++PF G R C G ++ + L ++ NF S+D
Sbjct: 389 FDPGHFLDKNGNFKKSDYFMPFSAGKRICAGEGLARMELFLFLTTILQNFNLKSVD 444
>pdb|3P3L|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Wildtype) From Streptomyces Thioluteus
pdb|3P3L|B Chain B, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Wildtype) From Streptomyces Thioluteus
Length = 406
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/236 (21%), Positives = 97/236 (41%), Gaps = 48/236 (20%)
Query: 263 VKTNLSYREKNN----IKRDDFLNIMMQLQIAQ-RGKTLSPDDVEMTDDVITA------- 310
++TNL N+ +K + L M +A + + P D ++T D++ A
Sbjct: 171 IETNLGLALSNDQDILVKVEQGLGRMFDYLVAAIEKRKVEPGD-DLTSDIVRAFHDGVLD 229
Query: 311 ----QSFV--FFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICH 364
++ V GYET++ L +Y+ A++PD K+ K+ EL
Sbjct: 230 DYELRTLVATVLVAGYETTNHQLALAMYDFAQHPDQWMKI--------KENPELA----- 276
Query: 365 KMSYLDKVTKEALRMYPSLP-QLDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPEYY 423
+ +E LR P+LP R++ + +++ + + GT + + H DP +
Sbjct: 277 -----PQAVEEVLRWSPTLPVTATRVAAEDFEV--NGVRIPTGTPVFMCAHVAHRDPRVF 329
Query: 424 PDPEKFDPERFSPENIESRPHYTYLPFGDGPRNCIGMRFGTIQFKIGLAQLISNFE 479
D ++FD I + + FG GP C+G ++ +A L + +
Sbjct: 330 ADADRFD--------ITVKREAPSIAFGGGPHFCLGTALARLELTEAVAALATRLD 377
>pdb|3P3O|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Ntermii) From Streptomyces Thioluteus
pdb|3P3X|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Nterm- Aurh-I) From Streptomyces Thioluteus
pdb|3P3X|B Chain B, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Nterm- Aurh-I) From Streptomyces Thioluteus
pdb|3P3Z|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh From Streptomyces Thioluteus In Complex With
Ancymidol
Length = 416
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/236 (21%), Positives = 97/236 (41%), Gaps = 48/236 (20%)
Query: 263 VKTNLSYREKNN----IKRDDFLNIMMQLQIAQ-RGKTLSPDDVEMTDDVITA------- 310
++TNL N+ +K + L M +A + + P D ++T D++ A
Sbjct: 181 IETNLGLALSNDQDILVKVEQGLGRMFDYLVAAIEKRKVEPGD-DLTSDIVRAFHDGVLD 239
Query: 311 ----QSFV--FFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICH 364
++ V GYET++ L +Y+ A++PD K+ K+ EL
Sbjct: 240 DYELRTLVATVLVAGYETTNHQLALAMYDFAQHPDQWMKI--------KENPELA----- 286
Query: 365 KMSYLDKVTKEALRMYPSLP-QLDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPEYY 423
+ +E LR P+LP R++ + +++ + + GT + + H DP +
Sbjct: 287 -----PQAVEEVLRWSPTLPVTATRVAAEDFEV--NGVRIPTGTPVFMCAHVAHRDPRVF 339
Query: 424 PDPEKFDPERFSPENIESRPHYTYLPFGDGPRNCIGMRFGTIQFKIGLAQLISNFE 479
D ++FD I + + FG GP C+G ++ +A L + +
Sbjct: 340 ADADRFD--------ITVKREAPSIAFGGGPHFCLGTALARLELTEAVAALATRLD 387
>pdb|1SUO|A Chain A, Structure Of Mammalian Cytochrome P450 2b4 With Bound
4-(4- Chlorophenyl)imidazole
pdb|2BDM|A Chain A, Structure Of Cytochrome P450 2b4 With Bound Bifonazole
pdb|3G5N|A Chain A, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|B Chain B, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|C Chain C, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|D Chain D, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|A Chain A, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|B Chain B, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|C Chain C, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|D Chain D, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3KW4|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Ticlopidine
pdb|3ME6|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|B Chain B, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|C Chain C, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|D Chain D, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3MVR|A Chain A, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3MVR|B Chain B, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3R1A|A Chain A, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|B Chain B, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|C Chain C, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|D Chain D, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|E Chain E, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|F Chain F, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|G Chain G, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|H Chain H, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|A Chain A, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|B Chain B, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|C Chain C, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|D Chain D, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3TMZ|A Chain A, Crystal Structure Of P450 2b4(H226y) In Complex With
Amlodipine
pdb|3UAS|A Chain A, Cytochrome P450 2b4 Covalently Bound To The
Mechanism-based Inactivator 9-ethynylphenanthrene
Length = 476
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 95/413 (23%), Positives = 171/413 (41%), Gaps = 46/413 (11%)
Query: 89 PKLMVTDPELYKYILIKDFDHFVDRGIGESDAKRDPI-EGH-LFGSKGEYWKRLRNKLSP 146
P +++ + + L+ + F RG A DPI +G+ + + GE W+ LR
Sbjct: 55 PVVVLCGTDAIREALVDQAEAFSGRG---KIAVVDPIFQGYGVIFANGERWRALRRFSLA 111
Query: 147 T---FTSGKIKYMFPLIKKCSDQLITTIRKQIGESKQMSLEVKDYCARYTTDVIGSTAFG 203
T F GK + + I++ + L+ +RK SK L+ T+++I S FG
Sbjct: 112 TMRDFGMGK-RSVEERIQEEARCLVEELRK----SKGALLDNTLLFHSITSNIICSIVFG 166
Query: 204 IEINSLENPDSEFRQVSLLVMKPSVLQMLKAVLSELIPLIKYLNLKIFDPRISQFFSNLV 263
+ D F + LL + ++ + S++ L LK F Q + NL
Sbjct: 167 ---KRFDYKDPVF--LRLLDLFFQSFSLISSFSSQVFELFSGF-LKYFPGTHRQIYRNLQ 220
Query: 264 KTNL---SYREKNNIKRD-----DFLNIMMQLQIAQRGKTLSPDDVEMTDDVITAQSFVF 315
+ N EK+ D DF+++ L ++ K+ + + ++T S
Sbjct: 221 EINTFIGQSVEKHRATLDPSNPRDFIDVY--LLRMEKDKSDPSSEFHHQNLILTVLSL-- 276
Query: 316 FFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSYLDKVTKE 375
FF G ET+S+ L + + + P + ++++EI + KM Y D V E
Sbjct: 277 FFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHRPPALDDRAKMPYTDAVIHE 336
Query: 376 ALRMYPSLPQLDRISVKK------YKLP-NTDLTLDVGTKISIPTFAIHYDPEYYPDPEK 428
R+ +P +V K Y +P NT++ + + A+H DP Y+ P
Sbjct: 337 IQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEV-------FPVLSSALH-DPRYFETPNT 388
Query: 429 FDPERFSPENIESRPHYTYLPFGDGPRNCIGMRFGTIQFKIGLAQLISNFEFS 481
F+P F N + + ++PF G R C+G + + ++ NF +
Sbjct: 389 FNPGHFLDANGALKRNEGFMPFSLGKRICLGEGIARTELFLFFTTILQNFSIA 441
>pdb|2Q6N|A Chain A, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|B Chain B, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|C Chain C, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|D Chain D, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|E Chain E, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|F Chain F, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|G Chain G, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
Length = 478
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 95/413 (23%), Positives = 171/413 (41%), Gaps = 46/413 (11%)
Query: 89 PKLMVTDPELYKYILIKDFDHFVDRGIGESDAKRDPI-EGH-LFGSKGEYWKRLRNKLSP 146
P +++ + + L+ + F RG A DPI +G+ + + GE W+ LR
Sbjct: 55 PVVVLCGTDAIREALVDQAEAFSGRG---KIAVVDPIFQGYGVIFANGERWRALRRFSLA 111
Query: 147 T---FTSGKIKYMFPLIKKCSDQLITTIRKQIGESKQMSLEVKDYCARYTTDVIGSTAFG 203
T F GK + + I++ + L+ +RK SK L+ T+++I S FG
Sbjct: 112 TMRDFGMGK-RSVEERIQEEARCLVEELRK----SKGALLDNTLLFHSITSNIICSIVFG 166
Query: 204 IEINSLENPDSEFRQVSLLVMKPSVLQMLKAVLSELIPLIKYLNLKIFDPRISQFFSNLV 263
+ D F + LL + ++ + S++ L LK F Q + NL
Sbjct: 167 ---KRFDYKDPVF--LRLLDLFFQSFSLISSFSSQVFELFSGF-LKYFPGTHRQIYRNLQ 220
Query: 264 KTNL---SYREKNNIKRD-----DFLNIMMQLQIAQRGKTLSPDDVEMTDDVITAQSFVF 315
+ N EK+ D DF+++ L ++ K+ + + ++T S
Sbjct: 221 EINTFIGQSVEKHRATLDPSNPRDFIDVY--LLRMEKDKSDPSSEFHHQNLILTVLSL-- 276
Query: 316 FFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSYLDKVTKE 375
FF G ET+S+ L + + + P + ++++EI + KM Y D V E
Sbjct: 277 FFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHRPPALDDRAKMPYTDAVIHE 336
Query: 376 ALRMYPSLPQLDRISVKK------YKLP-NTDLTLDVGTKISIPTFAIHYDPEYYPDPEK 428
R+ +P +V K Y +P NT++ + + A+H DP Y+ P
Sbjct: 337 IQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEV-------FPVLSSALH-DPRYFETPNT 388
Query: 429 FDPERFSPENIESRPHYTYLPFGDGPRNCIGMRFGTIQFKIGLAQLISNFEFS 481
F+P F N + + ++PF G R C+G + + ++ NF +
Sbjct: 389 FNPGHFLDANGALKRNEGFMPFSLGKRICLGEGIARTELFLFFTTILQNFSIA 441
>pdb|1PO5|A Chain A, Structure Of Mammalian Cytochrome P450 2b4
Length = 476
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 95/413 (23%), Positives = 171/413 (41%), Gaps = 46/413 (11%)
Query: 89 PKLMVTDPELYKYILIKDFDHFVDRGIGESDAKRDPI-EGH-LFGSKGEYWKRLRNKLSP 146
P +++ + + L+ + F RG A DPI +G+ + + GE W+ LR
Sbjct: 55 PVVVLCGTDAIREALVDQAEAFSGRG---KIAVVDPIFQGYGVIFANGERWRALRRFSLA 111
Query: 147 T---FTSGKIKYMFPLIKKCSDQLITTIRKQIGESKQMSLEVKDYCARYTTDVIGSTAFG 203
T F GK + + I++ + L+ +RK SK L+ T+++I S FG
Sbjct: 112 TMRDFGMGK-RSVEERIQEEARCLVEELRK----SKGALLDNTLLFHSITSNIICSIVFG 166
Query: 204 IEINSLENPDSEFRQVSLLVMKPSVLQMLKAVLSELIPLIKYLNLKIFDPRISQFFSNLV 263
+ D F + LL + ++ + S++ L LK F Q + NL
Sbjct: 167 ---KRFDYKDPVF--LRLLDLFFQSFSLISSFSSQVFELFSGF-LKHFPGTHRQIYRNLQ 220
Query: 264 KTNL---SYREKNNIKRD-----DFLNIMMQLQIAQRGKTLSPDDVEMTDDVITAQSFVF 315
+ N EK+ D DF+++ L ++ K+ + + ++T S
Sbjct: 221 EINTFIGQSVEKHRATLDPSNPRDFIDVY--LLRMEKDKSDPSSEFHHQNLILTVLSL-- 276
Query: 316 FFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSYLDKVTKE 375
FF G ET+S+ L + + + P + ++++EI + KM Y D V E
Sbjct: 277 FFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHRPPALDDRAKMPYTDAVIHE 336
Query: 376 ALRMYPSLPQLDRISVKK------YKLP-NTDLTLDVGTKISIPTFAIHYDPEYYPDPEK 428
R+ +P +V K Y +P NT++ + + A+H DP Y+ P
Sbjct: 337 IQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEV-------FPVLSSALH-DPRYFETPNT 388
Query: 429 FDPERFSPENIESRPHYTYLPFGDGPRNCIGMRFGTIQFKIGLAQLISNFEFS 481
F+P F N + + ++PF G R C+G + + ++ NF +
Sbjct: 389 FNPGHFLDANGALKRNEGFMPFSLGKRICLGEGIARTELFLFFTTILQNFSIA 441
>pdb|1WIY|A Chain A, Crystal Structure Analysis Of A 6-Coordinated Cytochorome
P450 From Thermus Thermophilus Hb8
pdb|1WIY|B Chain B, Crystal Structure Analysis Of A 6-Coordinated Cytochorome
P450 From Thermus Thermophilus Hb8
Length = 389
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 67/171 (39%), Gaps = 24/171 (14%)
Query: 310 AQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSYL 369
+++ G+ET +S LT+ L+ PD Q + +
Sbjct: 213 SEAVTLLVAGHETVASALTWSFLLLSHRPDWQKR------------------VAESEEAA 254
Query: 370 DKVTKEALRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPEYYPDPEKF 429
+EALR+YP L R +++ L D L GT + + + Y+P+ E F
Sbjct: 255 LAAFQEALRLYPPAWILTR-RLERPLLLGED-RLPQGTTLVLSPYVTQRL--YFPEGEAF 310
Query: 430 DPERFSPENIESRPHYTYLPFGDGPRNCIGMRFGTIQFKIGLAQLISNFEF 480
PERF E P Y PFG G R C+G F ++ I L F
Sbjct: 311 QPERFLAER--GTPSGRYFPFGLGQRLCLGRDFALLEGPIVLRAFFRRFRL 359
>pdb|2VZ7|A Chain A, Crystal Structure Of The Yc-17-Bound Pikc D50n Mutant
pdb|2VZ7|B Chain B, Crystal Structure Of The Yc-17-Bound Pikc D50n Mutant
pdb|2VZM|A Chain A, Crystal Structure Of The Narbomycin-Bound Pikc D50n Mutant
pdb|2VZM|B Chain B, Crystal Structure Of The Narbomycin-Bound Pikc D50n Mutant
Length = 436
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 68/349 (19%), Positives = 129/349 (36%), Gaps = 90/349 (25%)
Query: 139 RLRNKLSPTFTSGKIKYMFPLIKKCSDQLITTIRKQIGESKQMSLEVKDYCARYTTDVIG 198
RLR ++ FT +++ + P +++ D L+ + L D A D++
Sbjct: 122 RLRKLVAREFTMRRVELLRPRVQEIVDGLVDAM-----------LAAPDGRA----DLME 166
Query: 199 STAFGIEIN------SLENPD-SEFRQVSLLVMKPSVLQMLKAVLSELIPLIKYLNLKIF 251
S A+ + I + PD + FR + + P + ++E+
Sbjct: 167 SLAWPLPITVISELLGVPEPDRAAFRVWTDAFVFPDDPAQAQTAMAEM------------ 214
Query: 252 DPRISQFFSNLVKTNLSYREKNNIKRDDFLNIMMQLQIAQRGKTLSPDDVEMTDDVITAQ 311
S + S L+ + K +D L+ ++ +T D +T + +
Sbjct: 215 ----SGYLSRLIDS------KRGQDGEDLLSALV--------RTSDEDGSRLTSEELLGM 256
Query: 312 SFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSYLDK 371
+ + G+ET+ +++ +Y L +PD + LR + M+ LD
Sbjct: 257 AHILLVAGHETTVNLIANGMYALLSHPDQLAALRAD------------------MTLLDG 298
Query: 372 VTKEALRMYPSLPQLDRISVKKYKLPNTDLTLD-----VGTKISIPTFAIHYDPEYYPDP 426
+E LR + Y+ P + LD G + + H PE +PDP
Sbjct: 299 AVEEMLRYEGP------VESATYRFPVEPVDLDGTVIPAGDTVLVVLADAHRTPERFPDP 352
Query: 427 EKFDPERFSPENIESRPHYTYLPFGDGPRNCIGMRFGTIQFKIGLAQLI 475
+FD R + +L FG G CIG ++ +I + L+
Sbjct: 353 HRFDIRRDT---------AGHLAFGHGIHFCIGAPLARLEARIAVRALL 392
>pdb|2WHW|A Chain A, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
pdb|2WHW|B Chain B, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
pdb|2WI9|A Chain A, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
pdb|2WI9|B Chain B, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
Length = 436
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 68/349 (19%), Positives = 129/349 (36%), Gaps = 90/349 (25%)
Query: 139 RLRNKLSPTFTSGKIKYMFPLIKKCSDQLITTIRKQIGESKQMSLEVKDYCARYTTDVIG 198
RLR ++ FT +++ + P +++ D L+ + L D A D++
Sbjct: 122 RLRKLVAREFTMRRVELLRPRVQEIVDGLVDAM-----------LAAPDGRA----DLME 166
Query: 199 STAFGIEIN------SLENPD-SEFRQVSLLVMKPSVLQMLKAVLSELIPLIKYLNLKIF 251
S A+ + I + PD + FR + + P + ++E+
Sbjct: 167 SLAWPLPITVISELLGVPEPDRAAFRVWTDAFVFPDDPAQAQTAMAEM------------ 214
Query: 252 DPRISQFFSNLVKTNLSYREKNNIKRDDFLNIMMQLQIAQRGKTLSPDDVEMTDDVITAQ 311
S + S L+ + K +D L+ ++ +T D +T + +
Sbjct: 215 ----SGYLSRLIDS------KRGQDGEDLLSALV--------RTSDEDGSRLTSEELLGM 256
Query: 312 SFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSYLDK 371
+ + G+ET+ +++ +Y L +PD + LR + M+ LD
Sbjct: 257 AHILLVAGHETTVNLIANGMYALLSHPDQLAALRAD------------------MTLLDG 298
Query: 372 VTKEALRMYPSLPQLDRISVKKYKLPNTDLTLD-----VGTKISIPTFAIHYDPEYYPDP 426
+E LR + Y+ P + LD G + + H PE +PDP
Sbjct: 299 AVEEMLRYEGP------VESATYRFPVEPVDLDGTVIPAGDTVLVVLADAHRTPERFPDP 352
Query: 427 EKFDPERFSPENIESRPHYTYLPFGDGPRNCIGMRFGTIQFKIGLAQLI 475
+FD R + +L FG G CIG ++ +I + L+
Sbjct: 353 HRFDIRRDT---------AGHLAFGHGIHFCIGAPLARLEARIAVRALL 392
>pdb|3TK3|A Chain A, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|B Chain B, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|C Chain C, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|D Chain D, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
Length = 476
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 95/413 (23%), Positives = 170/413 (41%), Gaps = 46/413 (11%)
Query: 89 PKLMVTDPELYKYILIKDFDHFVDRGIGESDAKRDPI-EGH-LFGSKGEYWKRLRNKLSP 146
P +++ + + L+ + F RG A DPI +G+ + + GE W+ LR
Sbjct: 55 PVVVLCGTDAIREALVDQAEAFSGRG---KIAVVDPIFQGYGVIFANGERWRALRRFSLA 111
Query: 147 T---FTSGKIKYMFPLIKKCSDQLITTIRKQIGESKQMSLEVKDYCARYTTDVIGSTAFG 203
T F GK + + I++ + L+ +RK SK L+ T+++I S FG
Sbjct: 112 TMRDFGMGK-RSVEERIQEEARCLVEELRK----SKGALLDNTLLFHSITSNIICSIVFG 166
Query: 204 IEINSLENPDSEFRQVSLLVMKPSVLQMLKAVLSELIPLIKYLNLKIFDPRISQFFSNLV 263
+ D F + LL + ++ + S++ L LK F Q + NL
Sbjct: 167 ---KRFDYKDPVF--LRLLDLFFQSFSLISSFSSQVFELFSGF-LKYFPGTHRQIYRNLQ 220
Query: 264 KTNL---SYREKNNIKRD-----DFLNIMMQLQIAQRGKTLSPDDVEMTDDVITAQSFVF 315
+ N EK+ D DF+++ L ++ K+ + + ++T S
Sbjct: 221 EINTFIGQSVEKHRATLDPSNPRDFIDVY--LLRMEKDKSDPSSEFHHQNLILTVLSL-- 276
Query: 316 FFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSYLDKVTKE 375
FF G ET+S+ L + + + P + ++++EI + KM Y D V E
Sbjct: 277 FFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHRPPALDDRAKMPYTDAVIHE 336
Query: 376 ALRMYPSLPQLDRISVKK------YKLP-NTDLTLDVGTKISIPTFAIHYDPEYYPDPEK 428
R+ +P +V K Y +P NT++ + + A+H DP Y+ P
Sbjct: 337 IQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEV-------FPVLSSALH-DPRYFETPNT 388
Query: 429 FDPERFSPENIESRPHYTYLPFGDGPRNCIGMRFGTIQFKIGLAQLISNFEFS 481
F+P F N + + ++PF G R C G + + ++ NF +
Sbjct: 389 FNPGHFLDANGALKRNEGFMPFSLGKRICAGEGIARTELFLFFTTILQNFSIA 441
>pdb|2BVJ|A Chain A, Ligand-Free Structure Of Cytochrome P450 Pikc (Cyp107l1)
pdb|2BVJ|B Chain B, Ligand-Free Structure Of Cytochrome P450 Pikc (Cyp107l1)
pdb|2C6H|A Chain A, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2C6H|B Chain B, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2C7X|A Chain A, Crystal Structure Of Narbomycin-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CA0|A Chain A, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CA0|B Chain B, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CD8|A Chain A, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CD8|B Chain B, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
Length = 436
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 68/349 (19%), Positives = 129/349 (36%), Gaps = 90/349 (25%)
Query: 139 RLRNKLSPTFTSGKIKYMFPLIKKCSDQLITTIRKQIGESKQMSLEVKDYCARYTTDVIG 198
RLR ++ FT +++ + P +++ D L+ + L D A D++
Sbjct: 122 RLRKLVAREFTMRRVELLRPRVQEIVDGLVDAM-----------LAAPDGRA----DLME 166
Query: 199 STAFGIEIN------SLENPD-SEFRQVSLLVMKPSVLQMLKAVLSELIPLIKYLNLKIF 251
S A+ + I + PD + FR + + P + ++E+
Sbjct: 167 SLAWPLPITVISELLGVPEPDRAAFRVWTDAFVFPDDPAQAQTAMAEM------------ 214
Query: 252 DPRISQFFSNLVKTNLSYREKNNIKRDDFLNIMMQLQIAQRGKTLSPDDVEMTDDVITAQ 311
S + S L+ + K +D L+ ++ +T D +T + +
Sbjct: 215 ----SGYLSRLIDS------KRGQDGEDLLSALV--------RTSDEDGSRLTSEELLGM 256
Query: 312 SFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSYLDK 371
+ + G+ET+ +++ +Y L +PD + LR + M+ LD
Sbjct: 257 AHILLVAGHETTVNLIANGMYALLSHPDQLAALRAD------------------MTLLDG 298
Query: 372 VTKEALRMYPSLPQLDRISVKKYKLPNTDLTLD-----VGTKISIPTFAIHYDPEYYPDP 426
+E LR + Y+ P + LD G + + H PE +PDP
Sbjct: 299 AVEEMLRYEGP------VESATYRFPVEPVDLDGTVIPAGDTVLVVLADAHRTPERFPDP 352
Query: 427 EKFDPERFSPENIESRPHYTYLPFGDGPRNCIGMRFGTIQFKIGLAQLI 475
+FD R + +L FG G CIG ++ +I + L+
Sbjct: 353 HRFDIRRDT---------AGHLAFGHGIHFCIGAPLARLEARIAVRALL 392
>pdb|1N97|A Chain A, Crystal Stucture Of Cyp175a1 From Thermus Thermophillus
Strain Hb27
pdb|1N97|B Chain B, Crystal Stucture Of Cyp175a1 From Thermus Thermophillus
Strain Hb27
Length = 389
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 67/171 (39%), Gaps = 24/171 (14%)
Query: 310 AQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSYL 369
+++ G+ET +S LT+ L+ PD Q + +
Sbjct: 213 SEAVTLLVAGHETVASALTWSFLLLSHRPDWQKR------------------VAESEEAA 254
Query: 370 DKVTKEALRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPEYYPDPEKF 429
+EALR+YP L R +++ L D L GT + + + ++PD E F
Sbjct: 255 LAAFQEALRLYPPAWILTR-RLERPLLLGED-RLPPGTTLVLSPYVTQRL--HFPDGEAF 310
Query: 430 DPERFSPENIESRPHYTYLPFGDGPRNCIGMRFGTIQFKIGLAQLISNFEF 480
PERF E P Y PFG G R C+G F ++ I L F
Sbjct: 311 RPERFLEER--GTPSGRYFPFGLGQRLCLGRDFALLEGPIVLRAFFRRFRL 359
>pdb|3EQM|A Chain A, Crystal Structure Of Human Placental Aromatase Cytochrome
P450 In Complex With Androstenedione
pdb|3S79|A Chain A, Human Placental Aromatase Cytochrome P450 (Cyp19a1)
Refined At 2.75 Angstrom
pdb|3S7S|A Chain A, Crystal Structure Of Human Placental Aromatase Complexed
With Breast Cancer Drug Exemestane
pdb|4GL5|A Chain A, Structure Of Human Placental Aromatase Complexed With
Designed Inhibitor Hddg029 (Compound 4)
pdb|4GL7|A Chain A, Structure Of Human Placental Aromatase Complexed With
Designed Inhibitor Hddg046 (Compound 5)
Length = 503
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 76/158 (48%), Gaps = 8/158 (5%)
Query: 321 ETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSYLDKVTKEALRMY 380
+T S L F L+ +A++P+++ + +EI T E ++ + K+ ++ E++R
Sbjct: 309 DTMSVSLFFMLFLIAKHPNVEEAIIKEI-QTVIGERDIKIDDIQKLKVMENFIYESMRYQ 367
Query: 381 PSLPQLDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPEYYPDPEKFDPERFSPENIE 440
P + + R +++ + + GT I + +H E++P P +F E F+ +
Sbjct: 368 PVVDLVMRKALEDDVIDG--YPVKKGTNIILNIGRMH-RLEFFPKPNEFTLENFA----K 420
Query: 441 SRPHYTYLPFGDGPRNCIGMRFGTIQFKIGLAQLISNF 478
+ P+ + PFG GPR C G + K L L+ F
Sbjct: 421 NVPYRYFQPFGFGPRGCAGKYIAMVMMKAILVTLLRRF 458
>pdb|3QM4|A Chain A, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3QM4|B Chain B, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3TBG|A Chain A, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|B Chain B, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|C Chain C, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|D Chain D, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TDA|A Chain A, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|B Chain B, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|C Chain C, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|D Chain D, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
Length = 479
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 80/184 (43%), Gaps = 25/184 (13%)
Query: 315 FFFGGYETSSSVLTFCLYELARNPDIQSKLRQEI--MATKKKEGELTYEICHKMSYLDKV 372
F G T+S+ L + L + +PD+Q +++QEI + + + E+ + M Y V
Sbjct: 280 LFSAGMVTTSTTLAWGLLLMILHPDVQRRVQQEIDDVIGQVRRPEMGDQA--HMPYTTAV 337
Query: 373 TKEALRMYPSLP------QLDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPEYYPDP 426
E R +P I V+ +++P GT + ++ D + P
Sbjct: 338 IHEVQRFGDIVPLGVTHMTSRDIEVQGFRIPK-------GTTLITNLSSVLKDEAVWEKP 390
Query: 427 EKFDPERFSPENIESRPHY----TYLPFGDGPRNCIGMRFGTIQFKIGLAQLISNFEFSI 482
+F PE F ++++ H+ +LPF G R C+G ++ + L+ +F FS+
Sbjct: 391 FRFHPEHF----LDAQGHFVKPEAFLPFSAGRRACLGEPLARMELFLFFTSLLQHFSFSV 446
Query: 483 DSAN 486
+
Sbjct: 447 PTGQ 450
>pdb|2F9Q|A Chain A, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|B Chain B, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|C Chain C, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|D Chain D, Crystal Structure Of Human Cytochrome P450 2d6
Length = 479
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 80/184 (43%), Gaps = 25/184 (13%)
Query: 315 FFFGGYETSSSVLTFCLYELARNPDIQSKLRQEI--MATKKKEGELTYEICHKMSYLDKV 372
F G T+S+ L + L + +PD+Q +++QEI + + + E+ + M Y V
Sbjct: 280 LFSAGMVTTSTTLAWGLLLMILHPDVQRRVQQEIDDVIGQVRRPEMGDQA--HMPYTTAV 337
Query: 373 TKEALRMYPSLP------QLDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPEYYPDP 426
E R +P I V+ +++P GT + ++ D + P
Sbjct: 338 IHEVQRFGDIVPLGMTHMTSRDIEVQGFRIPK-------GTTLITNLSSVLKDEAVWEKP 390
Query: 427 EKFDPERFSPENIESRPHY----TYLPFGDGPRNCIGMRFGTIQFKIGLAQLISNFEFSI 482
+F PE F ++++ H+ +LPF G R C+G ++ + L+ +F FS+
Sbjct: 391 FRFHPEHF----LDAQGHFVKPEAFLPFSAGRRACLGEPLARMELFLFFTSLLQHFSFSV 446
Query: 483 DSAN 486
+
Sbjct: 447 PTGQ 450
>pdb|2JJN|A Chain A, Structure Of Closed Cytochrome P450 Eryk
pdb|2JJO|A Chain A, Structure Of Cytochrome P450 Eryk In Complex With Its
Natural Substrate Erd
pdb|2JJP|A Chain A, Structure Of Cytochrome P450 Eryk In Complex With
Inhibitor Ketoconazole (Kc)
pdb|2XFH|A Chain A, Structure Of Cytochrome P450 Eryk Cocrystallized With
Inhibitor Clotrimazole
Length = 411
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/128 (22%), Positives = 59/128 (46%), Gaps = 10/128 (7%)
Query: 371 KVTKEALRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPEYYPDPEKFD 430
+ +E LR P PQ+ R + K ++ + DV ++ + + D + + DP++FD
Sbjct: 276 AIVEEVLRYRPPFPQMQRTTTKATEVAGVPIPADV--MVNTWVLSANRDSDAHDDPDRFD 333
Query: 431 PERFSPENIESRPHYTYLPFGDGPRNCIGMRFGTIQFKIGLAQLISNF-EFSIDSANATF 489
P R S + L FG G C+G ++ ++ L ++I+ F ++D +
Sbjct: 334 PSRKSGGAAQ-------LSFGHGVHFCLGAPLARLENRVALEEIIARFGRLTVDRDDERL 386
Query: 490 EYLKGSIL 497
+ + +L
Sbjct: 387 RHFEQIVL 394
>pdb|2VRV|A Chain A, Structure Of Histidine Tagged Cytochrome P450 Eryk In
Complex With Inhibitor Clotrimazole (Clt)
pdb|2WIO|A Chain A, Structure Of The Histidine Tagged, Open Cytochrome P450
Eryk From S. Erythraea
Length = 431
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/128 (22%), Positives = 59/128 (46%), Gaps = 10/128 (7%)
Query: 371 KVTKEALRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPEYYPDPEKFD 430
+ +E LR P PQ+ R + K ++ + DV ++ + + D + + DP++FD
Sbjct: 296 AIVEEVLRYRPPFPQMQRTTTKATEVAGVPIPADV--MVNTWVLSANRDSDAHDDPDRFD 353
Query: 431 PERFSPENIESRPHYTYLPFGDGPRNCIGMRFGTIQFKIGLAQLISNF-EFSIDSANATF 489
P R S + L FG G C+G ++ ++ L ++I+ F ++D +
Sbjct: 354 PSRKSGGAAQ-------LSFGHGVHFCLGAPLARLENRVALEEIIARFGRLTVDRDDERL 406
Query: 490 EYLKGSIL 497
+ + +L
Sbjct: 407 RHFEQIVL 414
>pdb|4H1N|A Chain A, Crystal Structure Of P450 2b4 F297a Mutant In Complex With
Anti- Platelet Drug Clopidogrel
Length = 479
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 94/413 (22%), Positives = 170/413 (41%), Gaps = 46/413 (11%)
Query: 89 PKLMVTDPELYKYILIKDFDHFVDRGIGESDAKRDPI-EGH-LFGSKGEYWKRLRNKLSP 146
P +++ + + L+ + F RG A DPI +G+ + + GE W+ LR
Sbjct: 55 PVVVLCGTDAIREALVDQAEAFSGRG---KIAVVDPIFQGYGVIFANGERWRALRRFSLA 111
Query: 147 T---FTSGKIKYMFPLIKKCSDQLITTIRKQIGESKQMSLEVKDYCARYTTDVIGSTAFG 203
T F GK + + I++ + L+ +RK SK L+ T+++I S FG
Sbjct: 112 TMRDFGMGK-RSVEERIQEEARCLVEELRK----SKGALLDNTLLFHSITSNIICSIVFG 166
Query: 204 IEINSLENPDSEFRQVSLLVMKPSVLQMLKAVLSELIPLIKYLNLKIFDPRISQFFSNLV 263
+ D F + LL + ++ + S++ L LK F Q + NL
Sbjct: 167 ---KRFDYKDPVF--LRLLDLFFQSFSLISSFSSQVFELFSGF-LKYFPGTHRQIYRNLQ 220
Query: 264 KTNL---SYREKNNIKRD-----DFLNIMMQLQIAQRGKTLSPDDVEMTDDVITAQSFVF 315
+ N EK+ D DF+++ L ++ K+ + + ++T S
Sbjct: 221 EINTFIGQSVEKHRATLDPSNPRDFIDVY--LLRMEKDKSDPSSEFHHQNLILTVLSL-- 276
Query: 316 FFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSYLDKVTKE 375
F G ET+S+ L + + + P + ++++EI + KM Y D V E
Sbjct: 277 FAAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHRPPALDDRAKMPYTDAVIHE 336
Query: 376 ALRMYPSLPQLDRISVKK------YKLP-NTDLTLDVGTKISIPTFAIHYDPEYYPDPEK 428
R+ +P +V K Y +P NT++ + + A+H DP Y+ P
Sbjct: 337 IQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEV-------FPVLSSALH-DPRYFETPNT 388
Query: 429 FDPERFSPENIESRPHYTYLPFGDGPRNCIGMRFGTIQFKIGLAQLISNFEFS 481
F+P F N + + ++PF G R C+G + + ++ NF +
Sbjct: 389 FNPGHFLDANGALKRNEGFMPFSLGKRICLGEGIARTELFLFFTTILQNFSIA 441
>pdb|1UE8|A Chain A, Crystal Structure Of Thermophilic Cytochrome P450 From
Sulfolobus Tokodaii
pdb|3B4X|A Chain A, Crystal Structure Analysis Of Sulfolobus Tokodaii Strain7
Cytochrom P450
Length = 367
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 50/108 (46%), Gaps = 11/108 (10%)
Query: 371 KVTKEALRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPEYYPDPEKFD 430
K +EALR P P + I V K K+ D +D G + + + + D E + DP+ F
Sbjct: 242 KAVEEALRFSP--PVMRTIRVTKEKVKIRDQVIDEGELVRVWIASANRDEEVFKDPDSFI 299
Query: 431 PERFSPENIESRPHYTYLPFGDGPRNCIGMRFGTIQFKIGLAQLISNF 478
P+R +P PH L FG G C+G ++ +I L + F
Sbjct: 300 PDR-TPN-----PH---LSFGSGIHLCLGAPLARLEARIALEEFAKKF 338
>pdb|1ODO|A Chain A, 1.85 A Structure Of Cyp154a1 From Streptomyces Coelicolor
A3(2)
Length = 408
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 83/201 (41%), Gaps = 41/201 (20%)
Query: 284 MMQLQIAQR-----GKTLSPDDVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNP 338
M L IA R G LSP+ E+ D ++ + GYET+ +V+ ++ L P
Sbjct: 210 MTSLLIAARDDEGDGDRLSPE--ELRDTLL-----LMISAGYETTVNVIDQAVHTLLTRP 262
Query: 339 DIQSKLRQEIMATKKKEGELTYEICHKMSYLDKVTKEALRMYPSLPQLD-RISVKKYKLP 397
D + +R+ GE+T+ V +E LR P++ L R +V LP
Sbjct: 263 DQLALVRK---------GEVTWA---------DVVEETLRHEPAVKHLPLRYAVTDIALP 304
Query: 398 NTDLTLDVGTKISIPTFAIHYDPEYYPDPEKFDPERFSPENIESRPHYTYLPFGDGPRNC 457
+ T+ G I A + P+++ D + FD R E +L FG G C
Sbjct: 305 DGR-TIARGEPILASYAAANRHPDWHEDADTFDATRTVKE---------HLAFGHGVHFC 354
Query: 458 IGMRFGTIQFKIGLAQLISNF 478
+G ++ + L L F
Sbjct: 355 LGAPLARMEVTLALESLFGRF 375
>pdb|3PM0|A Chain A, Structural Characterization Of The Complex Between Alpha-
Naphthoflavone And Human Cytochrome P450 1b1 (Cyp1b1)
Length = 507
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 76/173 (43%), Gaps = 9/173 (5%)
Query: 316 FFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSYLDKVTKE 375
F +T S+ L + L R PD+Q++++ E+ ++ + Y+ E
Sbjct: 288 FGASQDTLSTALQWLLLLFTRYPDVQTRVQAELDQVVGRDRLPCMGDQPNLPYVLAFLYE 347
Query: 376 ALRMYPSLPQLDRISVKKYKLPNTDL---TLDVGTKISIPTFAIHYDPEYYPDPEKFDPE 432
A+R +P +++ NT + + T + + +++++DP +P+PE FDP
Sbjct: 348 AMRFSSFVP----VTIPHATTANTSVLGYHIPKDTVVFVNQWSVNHDPLKWPNPENFDPA 403
Query: 433 RFSPEN--IESRPHYTYLPFGDGPRNCIGMRFGTIQFKIGLAQLISNFEFSID 483
RF ++ I + F G R CIG +Q + ++ L +F +
Sbjct: 404 RFLDKDGLINKDLTSRVMIFSVGKRRCIGEELSKMQLFLFISILAHQCDFRAN 456
>pdb|3TKT|A Chain A, Crystal Structure Of Cyp108d1 From Novosphingobium
Aromaticivorans Dsm12444
Length = 450
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/176 (19%), Positives = 68/176 (38%), Gaps = 11/176 (6%)
Query: 304 TDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEIC 363
TDDV T + G + + + + D S ++ +L +
Sbjct: 257 TDDVATVIANAVVDGEPMSDRDTAGYYIITASAGHDTTSASSAGAALALARDPDLFARVK 316
Query: 364 HKMSYLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPEYY 423
+ L + +EA+R + R + +L + G + + A ++DP +
Sbjct: 317 ADRNLLPGIVEEAIRWTTPVQHFMRTAATDTELCGQKIA--AGDWLMLNYVAANHDPAQF 374
Query: 424 PDPEKFDPERFSPENIESRPHYTYLPFGDGPRNCIGMRFGTIQFKIGLAQLISNFE 479
P+P KFDP +RP +L FG G C+G+ ++ ++ L L+ +
Sbjct: 375 PEPRKFDP---------TRPANRHLAFGAGSHQCLGLHLARLEMRVLLDVLLDRVD 421
>pdb|3RWL|A Chain A, Structure Of P450pyr Hydroxylase
Length = 426
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/182 (21%), Positives = 74/182 (40%), Gaps = 28/182 (15%)
Query: 297 SPDDVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEG 356
SP MT + + GG +T+ + +T + L +NPD +KL+
Sbjct: 244 SPATRNMTPEEYLGNVLLLIVGGNDTTRNSMTGGVLALHKNPDQFAKLKA---------- 293
Query: 357 ELTYEICHKMSYLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKISIPTFAI 416
+ ++ + E +R L + R ++ +L T+ G K+ + ++
Sbjct: 294 --------NPALVETMVPEIIRWQTPLAHMRRTAIADSELGGK--TIRKGDKVVMWYYSG 343
Query: 417 HYDPEYYPDPEKFDPERFSPENIESRPHYTYLPFGDGPRNCIGMRFGTIQFKIGLAQLIS 476
+ D E PE+F +R P +L FG G C+G R +Q +I ++++
Sbjct: 344 NRDDEVIDRPEEFIIDRPRPRQ--------HLSFGFGIHRCVGNRLAEMQLRILWEEILT 395
Query: 477 NF 478
F
Sbjct: 396 RF 397
>pdb|3MGX|A Chain A, Crystal Structure Of P450 Oxyd That Is Involved In The
Biosynthesis Of Vancomycin-Type Antibiotics
pdb|3MGX|B Chain B, Crystal Structure Of P450 Oxyd That Is Involved In The
Biosynthesis Of Vancomycin-Type Antibiotics
Length = 415
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 77/195 (39%), Gaps = 33/195 (16%)
Query: 294 KTLSPDDVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKK 353
TL DD DDV+ V GG ET+ +T ++ LA P + + LR
Sbjct: 231 STLVTDDDLTIDDVLLNCDNVLI-GGNETTRHAITGAVHALATVPGLLTALRD------- 282
Query: 354 KEGELTYEICHKMSYLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKISIPT 413
+ +D V +E LR + R++ + DL GT +
Sbjct: 283 -----------GSADVDTVVEEVLRWTSPAMHVLRVTTADVTINGRDLP--SGTPVVAWL 329
Query: 414 FAIHYDPEYYPDPEKFDPERFSPENIESRPHYTYLPFGDGPRNCIGMRFGTIQFKI---G 470
A + DP + DP+ F P R +P+ ++ FG G +C+G I+ +
Sbjct: 330 PAANRDPAEFDDPDTFLPGR--------KPNR-HITFGHGMHHCLGSALARIELSVVLRV 380
Query: 471 LAQLISNFEFSIDSA 485
LA+ +S + + A
Sbjct: 381 LAERVSRVDLEREPA 395
>pdb|3R9C|A Chain A, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 With
Econazole Bound
pdb|3R9B|A Chain A, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
pdb|3R9B|B Chain B, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
pdb|3R9B|C Chain C, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
Length = 418
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/182 (20%), Positives = 68/182 (37%), Gaps = 39/182 (21%)
Query: 302 EMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYE 361
++T+D I A + G+ET+ +++ + R P + L +
Sbjct: 240 QLTEDEIIATCNLLLIAGHETTVNLIANAALAMLRTPGQWAALAAD-------------- 285
Query: 362 ICHKMSYLDKVTKEALRMYPSLPQLDR-----ISVKKYKLPNTDLTLDVGTKISIPTFAI 416
S V +E +R P + + R +++ + +P D L + A
Sbjct: 286 ----GSRASAVIEETMRYDPPVQLVSRYAGDDLTIGTHTVPKGDTML-------LLLAAA 334
Query: 417 HYDPEYYPDPEKFDPERFSPENIESRPHYTYLPFGDGPRNCIGMRFGTIQFKIGLAQLIS 476
H DP P++FDP+R +L FG G C+G ++ + L L +
Sbjct: 335 HRDPTIVGAPDRFDPDRA---------QIRHLGFGKGAHFCLGAPLARLEATVALPALAA 385
Query: 477 NF 478
F
Sbjct: 386 RF 387
>pdb|3CXV|A Chain A, Crystal Structure Of The Cytochrome P450 Cyp121 A233g
Mutant From Mycobacterium Tuberculosis
Length = 396
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/174 (21%), Positives = 73/174 (41%), Gaps = 29/174 (16%)
Query: 303 MTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEI 362
++D++ FF GG ++ S LT L L + P +++ L +
Sbjct: 218 VSDELFATIGVTFFGGGVISTGSFLTTALISLIQRPQLRNLLHE---------------- 261
Query: 363 CHKMSYLDKVTKEALRMYPSLPQ-LDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPE 421
K + +E LR+ S L R++ ++ D+ + G + + ++DPE
Sbjct: 262 --KPELIPAGVEELLRINLSFADGLPRLATADIQV--GDVLVRKGELVLVLLEGANFDPE 317
Query: 422 YYPDPEKFDPERFSPENIESRPHYTYLPFGDGPRNCIGMRFGTIQFKIGLAQLI 475
++P+P + +R +P ++L FG G C G G +IG+ L+
Sbjct: 318 HFPNPGSIELDRPNP--------TSHLAFGRGQHFCPGSALGRRHAQIGIEALL 363
>pdb|1IO8|A Chain A, Thermophilic Cytochrome P450 (Cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
pdb|1IO8|B Chain B, Thermophilic Cytochrome P450 (Cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
Length = 368
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 56/126 (44%), Gaps = 13/126 (10%)
Query: 371 KVTKEALRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPEYYPDPEKFD 430
K +EALR P + + R + ++ KL D T++ G + + + + D E + D EKF
Sbjct: 242 KAIEEALRYSPPVMRTVRKTKERVKL--GDQTIEEGEYVRVWIASANRDEEVFHDGEKFI 299
Query: 431 PERFSPENIESRPHYTYLPFGDGPRNCIGMRFGTIQFKIGLAQLISNFEF--SIDSANAT 488
P+R PH L FG G C+G ++ +I + + F +D+
Sbjct: 300 PDR------NPNPH---LSFGSGIHLCLGAPLARLEARIAIEEFSKRFRHIEILDTEKVP 350
Query: 489 FEYLKG 494
E L G
Sbjct: 351 NEVLNG 356
>pdb|1F4T|A Chain A, Thermophilic P450: Cyp119 From Sulfolobus Solfactaricus
With 4- Phenylimidazole Bound
pdb|1F4T|B Chain B, Thermophilic P450: Cyp119 From Sulfolobus Solfactaricus
With 4- Phenylimidazole Bound
pdb|1F4U|A Chain A, Thermophilic P450: Cyp119 From Sulfolobus Solfactaricus
pdb|1F4U|B Chain B, Thermophilic P450: Cyp119 From Sulfolobus Solfactaricus
pdb|1IO9|A Chain A, Thermophilic Cytochrome P450 (cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
pdb|1IO9|B Chain B, Thermophilic Cytochrome P450 (cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
pdb|1IO7|A Chain A, Thermophilic Cytochrome P450 (Cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
pdb|1IO7|B Chain B, Thermophilic Cytochrome P450 (Cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
Length = 368
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 56/126 (44%), Gaps = 13/126 (10%)
Query: 371 KVTKEALRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPEYYPDPEKFD 430
K +EALR P + + R + ++ KL D T++ G + + + + D E + D EKF
Sbjct: 242 KAIEEALRYSPPVMRTVRKTKERVKL--GDQTIEEGEYVRVWIASANRDEEVFHDGEKFI 299
Query: 431 PERFSPENIESRPHYTYLPFGDGPRNCIGMRFGTIQFKIGLAQLISNFEF--SIDSANAT 488
P+R PH L FG G C+G ++ +I + + F +D+
Sbjct: 300 PDR------NPNPH---LSFGSGIHLCLGAPLARLEARIAIEEFSKRFRHIEILDTEKVP 350
Query: 489 FEYLKG 494
E L G
Sbjct: 351 NEVLNG 356
>pdb|3CXY|A Chain A, Crystal Structure Of The Cytochrome P450 Cyp121 P346l
Mutant From M. Tuberculosis
Length = 396
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/174 (21%), Positives = 73/174 (41%), Gaps = 29/174 (16%)
Query: 303 MTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEI 362
++D++ FF G ++ S LT L L + P +++ L +
Sbjct: 218 VSDELFATIGVTFFGAGVISTGSFLTTALISLIQRPQLRNLLHE---------------- 261
Query: 363 CHKMSYLDKVTKEALRMYPSLPQ-LDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPE 421
K + +E LR+ S L R++ ++ D+ + G + + ++DPE
Sbjct: 262 --KPELIPAGVEELLRINLSFADGLPRLATADIQV--GDVLVRKGELVLVLLEGANFDPE 317
Query: 422 YYPDPEKFDPERFSPENIESRPHYTYLPFGDGPRNCIGMRFGTIQFKIGLAQLI 475
++P+P + +R +P ++L FG G C+G G +IG+ L+
Sbjct: 318 HFPNPGSIELDRPNP--------TSHLAFGRGQHFCLGSALGRRHAQIGIEALL 363
>pdb|3ABA|A Chain A, Crystal Structure Of Cyp105p1 In Complex With Filipin I
Length = 403
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 65/331 (19%), Positives = 131/331 (39%), Gaps = 71/331 (21%)
Query: 141 RNKLSPTFTSGKIKYMFPLIKKCSDQLITTIRKQIGESKQMSLEVKDYCARYTTDVIGST 200
R L+ FT +++ + P I++ D+ + I E++ +++ A ++ S
Sbjct: 99 RKLLAKEFTVRRMQALRPNIQRIVDEHLDAI-----EARGGPVDLVKTFANAVPSMVISD 153
Query: 201 AFGIEINSLENPDSEFRQVSLLVMKPSVLQMLKAVLSELIPLIKYLNLKIFDPRISQFFS 260
FG+ + +EF+ ++ +M+ V Q A +E + R+
Sbjct: 154 LFGVPVER----RAEFQDIAEAMMR--VDQ--DAAATEAAGM-----------RLGGLLY 194
Query: 261 NLVKTNLSYREKNNIKRDDFLNIMMQLQIAQRGKTLSPDDVEMTDDVITAQSFVFFFGGY 320
LV+ E+ DD ++ ++ T PD V + D + + +
Sbjct: 195 QLVQ------ERRANPGDDLISALI--------TTEDPDGV-VDDMFLMNAAGTLLIAAH 239
Query: 321 ETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSYLDKVTKEALRMY 380
+T++ ++ L +PD + LR++ S + +E LR Y
Sbjct: 240 DTTACMIGLGTALLLDSPDQLALLRED------------------PSLVGNAVEELLR-Y 280
Query: 381 PSLPQL--DRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPEYYPDPEKFDPERFSPEN 438
++ Q +R++ + +L + G ++ A +DP + +PE+FD
Sbjct: 281 LTIGQFGGERVATRDVELGGVRIA--KGEQVVAHVLAADFDPAFVEEPERFD-------- 330
Query: 439 IESRPHYTYLPFGDGPRNCIGMRFGTIQFKI 469
I RP +L FG G CIG + I+ +I
Sbjct: 331 ITRRP-APHLAFGFGAHQCIGQQLARIELQI 360
>pdb|3E5J|A Chain A, Crystal Structure Of Cyp105p1 Wild-type Ligand-free Form
pdb|3E5K|A Chain A, Crystal Structure Of Cyp105p1 Wild-Type 4-Phenylimidazole
Complex
Length = 403
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 65/331 (19%), Positives = 131/331 (39%), Gaps = 71/331 (21%)
Query: 141 RNKLSPTFTSGKIKYMFPLIKKCSDQLITTIRKQIGESKQMSLEVKDYCARYTTDVIGST 200
R L+ FT +++ + P I++ D+ + I E++ +++ A ++ S
Sbjct: 99 RKLLAKEFTVRRMQALRPNIQRIVDEHLDAI-----EARGGPVDLVKTFANAVPSMVISD 153
Query: 201 AFGIEINSLENPDSEFRQVSLLVMKPSVLQMLKAVLSELIPLIKYLNLKIFDPRISQFFS 260
FG+ + +EF+ ++ +M+ V Q A +E + R+
Sbjct: 154 LFGVPVER----RAEFQDIAEAMMR--VDQ--DAAATEAAGM-----------RLGGLLY 194
Query: 261 NLVKTNLSYREKNNIKRDDFLNIMMQLQIAQRGKTLSPDDVEMTDDVITAQSFVFFFGGY 320
LV+ E+ DD ++ ++ T PD V + D + + +
Sbjct: 195 QLVQ------ERRANPGDDLISALI--------TTEDPDGV-VDDMFLMNAAGTLLIAAH 239
Query: 321 ETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSYLDKVTKEALRMY 380
+T++ ++ L +PD + LR++ S + +E LR Y
Sbjct: 240 DTTACMIGLGTALLLDSPDQLALLRED------------------PSLVGNAVEELLR-Y 280
Query: 381 PSLPQL--DRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPEYYPDPEKFDPERFSPEN 438
++ Q +R++ + +L + G ++ A +DP + +PE+FD
Sbjct: 281 LTIGQFGGERVATRDVELGGVRIA--KGEQVVAHVLAADFDPAFVEEPERFD-------- 330
Query: 439 IESRPHYTYLPFGDGPRNCIGMRFGTIQFKI 469
I RP +L FG G CIG + I+ +I
Sbjct: 331 ITRRP-APHLAFGFGAHQCIGQQLARIELQI 360
>pdb|3OFU|A Chain A, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFU|B Chain B, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFU|C Chain C, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFU|D Chain D, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFU|E Chain E, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFU|F Chain F, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFT|A Chain A, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFT|B Chain B, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFT|C Chain C, Crystal Structure Of Cytochrome P450 Cyp101c1
Length = 396
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 57/262 (21%), Positives = 105/262 (40%), Gaps = 47/262 (17%)
Query: 237 SELIPLIKYLNL---KIFD-PRISQFFSNLVKTNLSYR-EKNNIKRDDFLNIMMQLQIAQ 291
+E++PL +L L + D PR+ Q L + + S E+ DD+L ++ ++AQ
Sbjct: 141 AEILPLNIFLTLIDVPLEDRPRLRQLGVQLTRPDGSMTVEQLKQAADDYLWPFIEKRMAQ 200
Query: 292 RGKTL------SP-DDVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKL 344
G L P T D FGG +T ++++ LAR+P+ Q L
Sbjct: 201 PGDDLFSRILSEPVGGRPWTVDEARRMCRNLLFGGLDTVAAMIGMVALHLARHPEDQRLL 260
Query: 345 RQEIMATKKKEGELTYEICHKMSYLDKVTKEALRMYPSLPQLDRISVKKYKLPNTD---L 401
R+ + + E +R YP+ ++V + + + D +
Sbjct: 261 RE------------------RPDLIPAAADELMRRYPT------VAVSRNAVADVDADGV 296
Query: 402 TLDVGTKISIPTFAIHYDPEYYPDPEKFDPERFSPENIESRPHYTYLPFGDGPRNCIGMR 461
T+ G + +P+ + DP + PE+ RF + H T G G C+G
Sbjct: 297 TIRKGDLVYLPSVLHNLDPASFEAPEEV---RFD-RGLAPIRHTT---MGVGAHRCVGAG 349
Query: 462 FGTIQFKIGLAQLISNF-EFSI 482
++ + L + + EF++
Sbjct: 350 LARMEVIVFLREWLGGMPEFAL 371
>pdb|3E5L|A Chain A, Crystal Structure Of Cyp105p1 H72a Mutant
Length = 403
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 65/331 (19%), Positives = 131/331 (39%), Gaps = 71/331 (21%)
Query: 141 RNKLSPTFTSGKIKYMFPLIKKCSDQLITTIRKQIGESKQMSLEVKDYCARYTTDVIGST 200
R L+ FT +++ + P I++ D+ + I E++ +++ A ++ S
Sbjct: 99 RKLLAKEFTVRRMQALRPNIQRIVDEHLDAI-----EARGGPVDLVKTFANAVPSMVISD 153
Query: 201 AFGIEINSLENPDSEFRQVSLLVMKPSVLQMLKAVLSELIPLIKYLNLKIFDPRISQFFS 260
FG+ + +EF+ ++ +M+ V Q A +E + R+
Sbjct: 154 LFGVPVER----RAEFQDIAEAMMR--VDQ--DAAATEAAGM-----------RLGGLLY 194
Query: 261 NLVKTNLSYREKNNIKRDDFLNIMMQLQIAQRGKTLSPDDVEMTDDVITAQSFVFFFGGY 320
LV+ E+ DD ++ ++ T PD V + D + + +
Sbjct: 195 QLVQ------ERRANPGDDLISALI--------TTEDPDGV-VDDMFLMNAAGTLLIAAH 239
Query: 321 ETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSYLDKVTKEALRMY 380
+T++ ++ L +PD + LR++ S + +E LR Y
Sbjct: 240 DTTACMIGLGTALLLDSPDQLALLRED------------------PSLVGNAVEELLR-Y 280
Query: 381 PSLPQL--DRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPEYYPDPEKFDPERFSPEN 438
++ Q +R++ + +L + G ++ A +DP + +PE+FD
Sbjct: 281 LTIGQFGGERVATRDVELGGVRIA--KGEQVVAHVLAADFDPAFVEEPERFD-------- 330
Query: 439 IESRPHYTYLPFGDGPRNCIGMRFGTIQFKI 469
I RP +L FG G CIG + I+ +I
Sbjct: 331 ITRRP-APHLAFGFGAHQCIGQQLARIELQI 360
>pdb|2Z36|A Chain A, Crystal Structure Of Cytochrome P450 Moxa From Nonomuraea
Recticatena (Cyp105)
pdb|2Z36|B Chain B, Crystal Structure Of Cytochrome P450 Moxa From Nonomuraea
Recticatena (Cyp105)
Length = 413
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/158 (17%), Positives = 61/158 (38%), Gaps = 28/158 (17%)
Query: 312 SFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSYLDK 371
+F+ G+ET++++++ + L +P +++ K G + + Y
Sbjct: 239 AFLLLTAGHETTANMISLGVVGLLSHP-------EQLTVVKANPGRTPMAVEELLRYFTI 291
Query: 372 VTKEALRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPEYYPDPEKFDP 431
R+ ++ +S+K G + + + ++DP + DP D
Sbjct: 292 ADGVTSRLATEDVEIGGVSIK------------AGEGVIVSMLSANWDPAVFKDPAVLDV 339
Query: 432 ERFSPENIESRPHYTYLPFGDGPRNCIGMRFGTIQFKI 469
ER + +L FG GP C+G ++ +I
Sbjct: 340 ERGA---------RHHLAFGFGPHQCLGQNLARMELQI 368
>pdb|4EP6|A Chain A, Crystal Structure Of The Xpla Heme Domain In Complex With
Imidazole And Peg
Length = 392
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 67/320 (20%), Positives = 115/320 (35%), Gaps = 49/320 (15%)
Query: 169 TTIRKQIGESKQMSLEVKDYCARYTTDVIGSTAFGIEINSLENPDSEFRQVSLLVMKPSV 228
T +R+Q +K + ++ D R T +++G G+E + + V V V
Sbjct: 86 TVLRRQT--NKWFTPKLVDGWVRTTRELVGDLLDGVEAGQVIEARRDLAVVPTHVTMARV 143
Query: 229 LQM----LKAVLSELIPLIKYLNLKIFD---PRISQFFSNLVKTNLSYREKNNIKRDDFL 281
LQ+ AV+ + + + + D R + F L E + D L
Sbjct: 144 LQLPEDDADAVMEAMFEAMLMQSAEPADGDVDRAAVAFGYLSARVAEMLEDKRVNPGDGL 203
Query: 282 NIMMQLQIAQRGKTLSPDDVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQ 341
+ L A+ G E+T+ A VF+ G+ ++ + AR P++
Sbjct: 204 ADSL-LDAARAG--------EITESEAIATILVFYAVGHMAIGYLIASGIELFARRPEVF 254
Query: 342 SKLRQEIMATKKKEGELTYEICHKMSYLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDL 401
+ R + A + E +RM P PQL + + +
Sbjct: 255 TAFRNDESARAA------------------IINEMVRMDP--PQLSFLRFPTEDVEIGGV 294
Query: 402 TLDVGTKISIPTFAIHYDPEYYPDPEKFDPERFSPENIESRPHYTY--LPFGDGPRNCIG 459
++ G+ I A + DPE + DP+ FD +RP L FG GP +C G
Sbjct: 295 LIEAGSPIRFMIGAANRDPEVFDDPDVFD---------HTRPPAASRNLSFGLGPHSCAG 345
Query: 460 MRFGTIQFKIGLAQLISNFE 479
+ A L +E
Sbjct: 346 QIISRAEATTVFAVLAERYE 365
>pdb|2WIV|A Chain A, Cytochrome-P450 Xpla Heme Domain P21
pdb|2WIV|B Chain B, Cytochrome-P450 Xpla Heme Domain P21
pdb|2WIY|A Chain A, Cytochrome P450 Xpla Heme Domain P21212
Length = 394
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 67/320 (20%), Positives = 115/320 (35%), Gaps = 49/320 (15%)
Query: 169 TTIRKQIGESKQMSLEVKDYCARYTTDVIGSTAFGIEINSLENPDSEFRQVSLLVMKPSV 228
T +R+Q +K + ++ D R T +++G G+E + + V V V
Sbjct: 88 TVLRRQT--NKWFTPKLVDGWVRTTRELVGDLLDGVEAGQVIEARRDLAVVPTHVTMARV 145
Query: 229 LQM----LKAVLSELIPLIKYLNLKIFD---PRISQFFSNLVKTNLSYREKNNIKRDDFL 281
LQ+ AV+ + + + + D R + F L E + D L
Sbjct: 146 LQLPEDDADAVMEAMFEAMLMQSAEPADGDVDRAAVAFGYLSARVAEMLEDKRVNPGDGL 205
Query: 282 NIMMQLQIAQRGKTLSPDDVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQ 341
+ L A+ G E+T+ A VF+ G+ ++ + AR P++
Sbjct: 206 ADSL-LDAARAG--------EITESEAIATILVFYAVGHMAIGYLIASGIELFARRPEVF 256
Query: 342 SKLRQEIMATKKKEGELTYEICHKMSYLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDL 401
+ R + A + E +RM P PQL + + +
Sbjct: 257 TAFRNDESARAA------------------IINEMVRMDP--PQLSFLRFPTEDVEIGGV 296
Query: 402 TLDVGTKISIPTFAIHYDPEYYPDPEKFDPERFSPENIESRPHYTY--LPFGDGPRNCIG 459
++ G+ I A + DPE + DP+ FD +RP L FG GP +C G
Sbjct: 297 LIEAGSPIRFMIGAANRDPEVFDDPDVFD---------HTRPPAASRNLSFGLGPHSCAG 347
Query: 460 MRFGTIQFKIGLAQLISNFE 479
+ A L +E
Sbjct: 348 QIISRAEATTVFAVLAERYE 367
>pdb|4G1X|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Cyp121 In
Complex With 4-(1h-1,2,4-Triazol-1-Yl)quinolin-6-Amine
pdb|4G2G|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Cyp121 In
Complex With 4,4'-(1h-1,2,3-Triazole-1,5-Diyl)diphenol
Length = 395
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/174 (21%), Positives = 72/174 (41%), Gaps = 29/174 (16%)
Query: 303 MTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEI 362
++D++ FF G ++ S LT L L + P +++ L +
Sbjct: 217 VSDELFATIGVTFFGAGVISTGSFLTTALISLIQRPQLRNLLHE---------------- 260
Query: 363 CHKMSYLDKVTKEALRMYPSLPQ-LDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPE 421
K + +E LR+ S L R++ ++ D+ + G + + ++DPE
Sbjct: 261 --KPELIPAGVEELLRINLSFADGLPRLATADIQV--GDVLVRKGELVLVLLEGANFDPE 316
Query: 422 YYPDPEKFDPERFSPENIESRPHYTYLPFGDGPRNCIGMRFGTIQFKIGLAQLI 475
++P+P + +R +P ++L FG G C G G +IG+ L+
Sbjct: 317 HFPNPGSIELDRPNP--------TSHLAFGRGQHFCPGSALGRRHAQIGIEALL 362
>pdb|3CXZ|A Chain A, Crystal Structure Of Cytochrome P450 Cyp121 R386l Mutant
From M. Tuberculosis
Length = 396
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/174 (21%), Positives = 72/174 (41%), Gaps = 29/174 (16%)
Query: 303 MTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEI 362
++D++ FF G ++ S LT L L + P +++ L +
Sbjct: 218 VSDELFATIGVTFFGAGVISTGSFLTTALISLIQRPQLRNLLHE---------------- 261
Query: 363 CHKMSYLDKVTKEALRMYPSLPQ-LDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPE 421
K + +E LR+ S L R++ ++ D+ + G + + ++DPE
Sbjct: 262 --KPELIPAGVEELLRINLSFADGLPRLATADIQV--GDVLVRKGELVLVLLEGANFDPE 317
Query: 422 YYPDPEKFDPERFSPENIESRPHYTYLPFGDGPRNCIGMRFGTIQFKIGLAQLI 475
++P+P + +R +P ++L FG G C G G +IG+ L+
Sbjct: 318 HFPNPGSIELDRPNP--------TSHLAFGRGQHFCPGSALGRRHAQIGIEALL 363
>pdb|1N40|A Chain A, Atomic Structure Of Cyp121, A Mycobacterial P450
pdb|1N4G|A Chain A, Structure Of Cyp121, A Mycobacterial P450, In Complex With
Iodopyrazole
pdb|2IJ5|A Chain A, Crystal Structure Of Cytochrome P450 Cyp121, P212121 Space
Group
pdb|2IJ5|B Chain B, Crystal Structure Of Cytochrome P450 Cyp121, P212121 Space
Group
pdb|2IJ5|C Chain C, Crystal Structure Of Cytochrome P450 Cyp121, P212121 Space
Group
pdb|2IJ5|D Chain D, Crystal Structure Of Cytochrome P450 Cyp121, P212121 Space
Group
pdb|2IJ5|E Chain E, Crystal Structure Of Cytochrome P450 Cyp121, P212121 Space
Group
pdb|2IJ5|F Chain F, Crystal Structure Of Cytochrome P450 Cyp121, P212121 Space
Group
pdb|2IJ7|A Chain A, Structure Of Mycobacterium Tuberculosis Cyp121 In Complex
With The Antifungal Drug Fluconazole
pdb|2IJ7|B Chain B, Structure Of Mycobacterium Tuberculosis Cyp121 In Complex
With The Antifungal Drug Fluconazole
pdb|2IJ7|C Chain C, Structure Of Mycobacterium Tuberculosis Cyp121 In Complex
With The Antifungal Drug Fluconazole
pdb|2IJ7|D Chain D, Structure Of Mycobacterium Tuberculosis Cyp121 In Complex
With The Antifungal Drug Fluconazole
pdb|2IJ7|E Chain E, Structure Of Mycobacterium Tuberculosis Cyp121 In Complex
With The Antifungal Drug Fluconazole
pdb|2IJ7|F Chain F, Structure Of Mycobacterium Tuberculosis Cyp121 In Complex
With The Antifungal Drug Fluconazole
pdb|3G5F|A Chain A, Crystallographic Analysis Of Cytochrome P450 Cyp121
pdb|3G5H|A Chain A, Crystallographic Analysis Of Cytochrome P450 Cyp121
pdb|4G44|A Chain A, Structure Of P450 Cyp121 In Complex With Lead Compound
Mb286, 3-((1h- 1,2,4-Triazol-1-Yl)methyl)aniline
pdb|4G45|A Chain A, Structure Of Cytochrome Cyp121 In Complex With
2-Methylquinolin-6- Amine
pdb|4G46|A Chain A, Structure Of Cytochrome P450 Cyp121 In Complex With
4-Oxo-4,5,6,7- Tetrahydrobenzofuran-3-Carboxylate
pdb|4G47|A Chain A, Structure Of Cytochrome P450 Cyp121 In Complex With
4-(1h-1,2,4- Triazol-1-Yl)phenol
pdb|4G48|A Chain A, Structure Of Cyp121 In Complex With
4-(4-Phenoxy-1h-Pyrazol-3-Yl) Benzene-1,3-Diol
Length = 396
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/174 (21%), Positives = 72/174 (41%), Gaps = 29/174 (16%)
Query: 303 MTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEI 362
++D++ FF G ++ S LT L L + P +++ L +
Sbjct: 218 VSDELFATIGVTFFGAGVISTGSFLTTALISLIQRPQLRNLLHE---------------- 261
Query: 363 CHKMSYLDKVTKEALRMYPSLPQ-LDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPE 421
K + +E LR+ S L R++ ++ D+ + G + + ++DPE
Sbjct: 262 --KPELIPAGVEELLRINLSFADGLPRLATADIQV--GDVLVRKGELVLVLLEGANFDPE 317
Query: 422 YYPDPEKFDPERFSPENIESRPHYTYLPFGDGPRNCIGMRFGTIQFKIGLAQLI 475
++P+P + +R +P ++L FG G C G G +IG+ L+
Sbjct: 318 HFPNPGSIELDRPNP--------TSHLAFGRGQHFCPGSALGRRHAQIGIEALL 363
>pdb|3B6H|A Chain A, Crystal Structure Of Human Prostacyclin Synthase In
Complex With Inhibitor Minoxidil
pdb|3B6H|B Chain B, Crystal Structure Of Human Prostacyclin Synthase In
Complex With Inhibitor Minoxidil
Length = 498
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 65/153 (42%), Gaps = 21/153 (13%)
Query: 336 RNPDIQSKLRQEIMATKKKEGE-------LTYEICHKMSYLDKVTKEALRMYPSLPQLDR 388
+NP+ + +R E+ + + + L ++ LD V E+LR+ + P + R
Sbjct: 291 KNPEALAAVRGELESILWQAEQPVSQTTTLPQKVLDSTPVLDSVLSESLRLTAA-PFITR 349
Query: 389 ISVKKYKLPNTD---LTLDVGTKISI-PTFAIHYDPEYYPDPEKFDPERF-SPENIESRP 443
V +P D L G ++ + P + DPE Y DPE F RF +P+ E +
Sbjct: 350 EVVVDLAMPMADGREFNLRRGDRLLLFPFLSPQRDPEIYTDPEVFKYNRFLNPDGSEKKD 409
Query: 444 HYT--------YLPFGDGPRNCIGMRFGTIQFK 468
Y +P+G G +C+G + K
Sbjct: 410 FYKDGKRLKNYNMPWGAGHNHCLGRSYAVNSIK 442
>pdb|3CY0|A Chain A, Crystal Structure Of Cytochrome P450 Cyp121 S237a Mutant
From Mycobacterium Tuberculosis
Length = 396
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/174 (21%), Positives = 71/174 (40%), Gaps = 29/174 (16%)
Query: 303 MTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEI 362
++D++ FF G + S LT L L + P +++ L +
Sbjct: 218 VSDELFATIGVTFFGAGVIATGSFLTTALISLIQRPQLRNLLHE---------------- 261
Query: 363 CHKMSYLDKVTKEALRMYPSLPQ-LDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPE 421
K + +E LR+ S L R++ ++ D+ + G + + ++DPE
Sbjct: 262 --KPELIPAGVEELLRINLSFADGLPRLATADIQV--GDVLVRKGELVLVLLEGANFDPE 317
Query: 422 YYPDPEKFDPERFSPENIESRPHYTYLPFGDGPRNCIGMRFGTIQFKIGLAQLI 475
++P+P + +R +P ++L FG G C G G +IG+ L+
Sbjct: 318 HFPNPGSIELDRPNP--------TSHLAFGRGQHFCPGSALGRRHAQIGIEALL 363
>pdb|2IAG|A Chain A, Crystal Structure Of Human Prostacyclin Synthase
pdb|2IAG|B Chain B, Crystal Structure Of Human Prostacyclin Synthase
Length = 482
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 65/153 (42%), Gaps = 21/153 (13%)
Query: 336 RNPDIQSKLRQEIMATKKKEGE-------LTYEICHKMSYLDKVTKEALRMYPSLPQLDR 388
+NP+ + +R E+ + + + L ++ LD V E+LR+ + P + R
Sbjct: 279 KNPEALAAVRGELESILWQAEQPVSQTTTLPQKVLDSTPVLDSVLSESLRLTAA-PFITR 337
Query: 389 ISVKKYKLPNTD---LTLDVGTKISI-PTFAIHYDPEYYPDPEKFDPERF-SPENIESRP 443
V +P D L G ++ + P + DPE Y DPE F RF +P+ E +
Sbjct: 338 EVVVDLAMPMADGREFNLRRGDRLLLFPFLSPQRDPEIYTDPEVFKYNRFLNPDGSEKKD 397
Query: 444 HYT--------YLPFGDGPRNCIGMRFGTIQFK 468
Y +P+G G +C+G + K
Sbjct: 398 FYKDGKRLKNYNMPWGAGHNHCLGRSYAVNSIK 430
>pdb|2XKR|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Cyp142: A
Novel Cholesterol Oxidase
Length = 398
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/211 (18%), Positives = 87/211 (41%), Gaps = 40/211 (18%)
Query: 259 FSNLVKTNLSYREKNNIKRDDFLNIMMQLQIAQRGKTLSPDDVEMTDDVITAQSFVFFFG 318
+++ + ++ R + DD +++++ ++ D ++DD + ++ + G
Sbjct: 182 YNDFTRATIAARRADPT--DDLVSVLVSSEV---------DGERLSDDELVMETLLILIG 230
Query: 319 GYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSYLDKVTKEALR 378
G ET+ L+ +L RN D L+++ S L +E LR
Sbjct: 231 GDETTRHTLSGGTEQLLRNRDQWDLLQRDP------------------SLLPGAIEEMLR 272
Query: 379 MYPSLPQLDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPEYYPDPEKFDPERFSPEN 438
+ + R+ + T L G K+ + + ++D + +PEKFD +R
Sbjct: 273 WTAPVKNMCRVLTADTEFHGTALC--AGEKMMLLFESANFDEAVFCEPEKFDVQR----- 325
Query: 439 IESRPHYTYLPFGDGPRNCIGMRFGTIQFKI 469
P+ ++L FG G C+G + ++ +
Sbjct: 326 ---NPN-SHLAFGFGTHFCLGNQLARLELSL 352
>pdb|3CY1|A Chain A, Crystal Structure Of The Cytochrome P450 Cyp121 S279a
Mutant From M. Tuberculosis
Length = 396
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/174 (20%), Positives = 72/174 (41%), Gaps = 29/174 (16%)
Query: 303 MTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEI 362
++D++ FF G ++ S LT L L + P +++ L +
Sbjct: 218 VSDELFATIGVTFFGAGVISTGSFLTTALISLIQRPQLRNLLHE---------------- 261
Query: 363 CHKMSYLDKVTKEALRMYPSLPQ-LDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPE 421
K + +E LR+ + L R++ ++ D+ + G + + ++DPE
Sbjct: 262 --KPELIPAGVEELLRINLAFADGLPRLATADIQV--GDVLVRKGELVLVLLEGANFDPE 317
Query: 422 YYPDPEKFDPERFSPENIESRPHYTYLPFGDGPRNCIGMRFGTIQFKIGLAQLI 475
++P+P + +R +P ++L FG G C G G +IG+ L+
Sbjct: 318 HFPNPGSIELDRPNP--------TSHLAFGRGQHFCPGSALGRRHAQIGIEALL 363
>pdb|2D0E|A Chain A, Substrate Assited In Oxygen Activation In Cytochrome P450
158a2
Length = 407
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 76/178 (42%), Gaps = 32/178 (17%)
Query: 293 GKTLSPDDVEMTDDVITAQSFVFFFGGYE-TSSSVLTFCLYELARNPDIQSKLRQEIMAT 351
G + D++ +++ V A + GG T++S F L L P++ +LR E
Sbjct: 219 GAAVGRDEITLSEAVGLA--VLLQIGGEAVTNNSGQMFHL--LLSRPELAERLRSEPEIR 274
Query: 352 KKKEGELTYEICHKMSYLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKISI 411
+ EL I H+ + L RI+++ ++ + + G + +
Sbjct: 275 PRAIDELLRWIPHRNAV----------------GLSRIALEDVEI--KGVRIRAGDAVYV 316
Query: 412 PTFAIHYDPEYYPDPEKFDPERFSPENIESRPHYTYLPFGDGPRNCIGMRFGTIQFKI 469
A + DPE +PDP++ D ER SP PH + FG GP C G ++ ++
Sbjct: 317 SYLAANRDPEVFPDPDRIDFER-SPN-----PHVS---FGFGPHYCPGGMLARLESEL 365
>pdb|1SE6|A Chain A, Crystal Structure Of Streptomyces Coelicolor A3(2)
Cyp158a2 From Antibiotic Biosynthetic Pathways
pdb|1SE6|B Chain B, Crystal Structure Of Streptomyces Coelicolor A3(2)
Cyp158a2 From Antibiotic Biosynthetic Pathways
Length = 406
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 76/178 (42%), Gaps = 32/178 (17%)
Query: 293 GKTLSPDDVEMTDDVITAQSFVFFFGGYE-TSSSVLTFCLYELARNPDIQSKLRQEIMAT 351
G + D++ +++ V A + GG T++S F L L P++ +LR E
Sbjct: 219 GAAVGRDEITLSEAVGLA--VLLQIGGEAVTNNSGQMFHL--LLSRPELAERLRSEPEIR 274
Query: 352 KKKEGELTYEICHKMSYLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKISI 411
+ EL I H+ + L RI+++ ++ + + G + +
Sbjct: 275 PRAIDELLRWIPHRNAV----------------GLSRIALEDVEI--KGVRIRAGDAVYV 316
Query: 412 PTFAIHYDPEYYPDPEKFDPERFSPENIESRPHYTYLPFGDGPRNCIGMRFGTIQFKI 469
A + DPE +PDP++ D ER SP PH + FG GP C G ++ ++
Sbjct: 317 SYLAANRDPEVFPDPDRIDFER-SPN-----PHVS---FGFGPHYCPGGMLARLESEL 365
>pdb|3TZO|A Chain A, The Role Of I87 Of Cyp158a2 In Oxidative Coupling Reaction
pdb|3TZO|B Chain B, The Role Of I87 Of Cyp158a2 In Oxidative Coupling Reaction
Length = 410
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 76/178 (42%), Gaps = 32/178 (17%)
Query: 293 GKTLSPDDVEMTDDVITAQSFVFFFGGYE-TSSSVLTFCLYELARNPDIQSKLRQEIMAT 351
G + D++ +++ V A + GG T++S F L L P++ +LR E
Sbjct: 219 GAAVGRDEITLSEAVGLA--VLLQIGGEAVTNNSGQMFHL--LLSRPELAERLRSEPEIR 274
Query: 352 KKKEGELTYEICHKMSYLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKISI 411
+ EL I H+ + L RI+++ ++ + + G + +
Sbjct: 275 PRAIDELLRWIPHRNAV----------------GLSRIALEDVEI--KGVRIRAGDAVYV 316
Query: 412 PTFAIHYDPEYYPDPEKFDPERFSPENIESRPHYTYLPFGDGPRNCIGMRFGTIQFKI 469
A + DPE +PDP++ D ER SP PH + FG GP C G ++ ++
Sbjct: 317 SYLAANRDPEVFPDPDRIDFER-SPN-----PHVS---FGFGPHYCPGGMLARLESEL 365
>pdb|1S1F|A Chain A, Crystal Structure Of Streptomyces Coelicolor A3(2)
Cyp158a2 From Antibiotic Biosynthetic Pathways
Length = 406
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 76/178 (42%), Gaps = 32/178 (17%)
Query: 293 GKTLSPDDVEMTDDVITAQSFVFFFGGYE-TSSSVLTFCLYELARNPDIQSKLRQEIMAT 351
G + D++ +++ V A + GG T++S F L L P++ +LR E
Sbjct: 219 GAAVGRDEITLSEAVGLA--VLLQIGGEAVTNNSGQMFHL--LLSRPELAERLRSEPEIR 274
Query: 352 KKKEGELTYEICHKMSYLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKISI 411
+ EL I H+ + L RI+++ ++ + + G + +
Sbjct: 275 PRAIDELLRWIPHRNAV----------------GLSRIALEDVEI--KGVRIRAGDAVYV 316
Query: 412 PTFAIHYDPEYYPDPEKFDPERFSPENIESRPHYTYLPFGDGPRNCIGMRFGTIQFKI 469
A + DPE +PDP++ D ER SP PH + FG GP C G ++ ++
Sbjct: 317 SYLAANRDPEVFPDPDRIDFER-SPN-----PHVS---FGFGPHYCPGGMLARLESEL 365
>pdb|1T93|A Chain A, Evidence For Multiple Substrate Recognition And Molecular
Mechanism Of C-C Reaction By Cytochrome P450 Cyp158a2
From Streptomyces Coelicolor A3(2)
Length = 406
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 76/178 (42%), Gaps = 32/178 (17%)
Query: 293 GKTLSPDDVEMTDDVITAQSFVFFFGGYE-TSSSVLTFCLYELARNPDIQSKLRQEIMAT 351
G + D++ +++ V A + GG T++S F L L P++ +LR E
Sbjct: 219 GAAVGRDEITLSEAVGLA--VLLQIGGEAVTNNSGQMFHL--LLSRPELAERLRSEPEIR 274
Query: 352 KKKEGELTYEICHKMSYLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKISI 411
+ EL I H+ + L RI+++ ++ + + G + +
Sbjct: 275 PRAIDELLRWIPHRNAV----------------GLSRIALEDVEI--KGVRIRAGDAVYV 316
Query: 412 PTFAIHYDPEYYPDPEKFDPERFSPENIESRPHYTYLPFGDGPRNCIGMRFGTIQFKI 469
A + DPE +PDP++ D ER SP PH + FG GP C G ++ ++
Sbjct: 317 SYLAANRDPEVFPDPDRIDFER-SPN-----PHVS---FGFGPHYCPGGMLARLESEL 365
>pdb|3TNK|A Chain A, Crystal Structure Of Mutant I87r In Cyp158a2
pdb|3TNK|B Chain B, Crystal Structure Of Mutant I87r In Cyp158a2
Length = 407
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 76/178 (42%), Gaps = 32/178 (17%)
Query: 293 GKTLSPDDVEMTDDVITAQSFVFFFGGYE-TSSSVLTFCLYELARNPDIQSKLRQEIMAT 351
G + D++ +++ V A + GG T++S F L L P++ +LR E
Sbjct: 219 GAAVGRDEITLSEAVGLA--VLLQIGGEAVTNNSGQMFHL--LLSRPELAERLRSEPEIR 274
Query: 352 KKKEGELTYEICHKMSYLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKISI 411
+ EL I H+ + L RI+++ ++ + + G + +
Sbjct: 275 PRAIDELLRWIPHRNAV----------------GLSRIALEDVEI--KGVRIRAGDAVYV 316
Query: 412 PTFAIHYDPEYYPDPEKFDPERFSPENIESRPHYTYLPFGDGPRNCIGMRFGTIQFKI 469
A + DPE +PDP++ D ER SP PH + FG GP C G ++ ++
Sbjct: 317 SYLAANRDPEVFPDPDRIDFER-SPN-----PHVS---FGFGPHYCPGGMLARLESEL 365
>pdb|2D09|A Chain A, A Role For Active Site Water Molecules And Hydroxyl Groups
Of Substrate For Oxygen Activation In Cytochrome P450
158a2
Length = 407
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 76/178 (42%), Gaps = 32/178 (17%)
Query: 293 GKTLSPDDVEMTDDVITAQSFVFFFGGYE-TSSSVLTFCLYELARNPDIQSKLRQEIMAT 351
G + D++ +++ V A + GG T++S F L L P++ +LR E
Sbjct: 219 GAAVGRDEITLSEAVGLA--VLLQIGGEAVTNNSGQMFHL--LLSRPELAERLRSEPEIR 274
Query: 352 KKKEGELTYEICHKMSYLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKISI 411
+ EL I H+ + L RI+++ ++ + + G + +
Sbjct: 275 PRAIDELLRWIPHRNAV----------------GLSRIALEDVEI--KGVRIRAGDAVYV 316
Query: 412 PTFAIHYDPEYYPDPEKFDPERFSPENIESRPHYTYLPFGDGPRNCIGMRFGTIQFKI 469
A + DPE +PDP++ D ER SP PH + FG GP C G ++ ++
Sbjct: 317 SYLAANRDPEVFPDPDRIDFER-SPN-----PHVS---FGFGPHYCPGGMLARLESEL 365
>pdb|3FWG|A Chain A, Ferric Camphor Bound Cytochrome P450cam, Arg365leu,
Glu366gln, Monoclinic Crystal Form
pdb|3FWG|B Chain B, Ferric Camphor Bound Cytochrome P450cam, Arg365leu,
Glu366gln, Monoclinic Crystal Form
Length = 405
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 57/276 (20%), Positives = 108/276 (39%), Gaps = 48/276 (17%)
Query: 228 VLQMLKAVLSELIPLIKYLNLKIFDPRISQFFSNLVKTNLSY-----REKNNIKRDDFLN 282
+ +L + E IP +KYL ++ P S F+ + Y ++ D ++
Sbjct: 153 IFMLLAGLPEEDIPHLKYLTDQMTRPDGSMTFAEAKEALYDYLIPIIEQRRQKPGTDAIS 212
Query: 283 IMMQLQIAQRGKTLSPDDVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQS 342
I+ Q+ R +T D + GG +T + L+F + LA++P+
Sbjct: 213 IVANGQVNGR---------PITSDEAKRMCGLLLVGGLDTVVNFLSFSMEFLAKSPE--- 260
Query: 343 KLRQEIMATKKKEGELTYEICHKMSYLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLT 402
RQE++ ++ + +E LR + SL RI Y+ +
Sbjct: 261 -HRQELIQRPER--------------IPAACEELLRRF-SLVADGRILTSDYEF--HGVQ 302
Query: 403 LDVGTKISIPTFAIHYDPEYYPDPEKFDPERFSPENIE-SRPHYTYLPFGDGPRNCIGMR 461
L G +I +P D + E P +++ SR ++ FG G C+G
Sbjct: 303 LKKGDQILLPQMLSGLD----------ERENACPMHVDFSRQKVSHTTFGHGSHLCLGQH 352
Query: 462 FGTIQFKIGLAQLISNF-EFSIDSANATFEYLKGSI 496
+Q + L + ++ +FSI + A ++ G +
Sbjct: 353 LARLQIIVTLKEWLTRIPDFSI-APGAQIQHKSGIV 387
>pdb|4DXY|A Chain A, Crystal Structures Of Cyp101d2 Y96a Mutant
Length = 417
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 70/163 (42%), Gaps = 33/163 (20%)
Query: 321 ETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSYLDKVTKEALRMY 380
+T + L+F + LAR+P++ ++LR + + L + +E R +
Sbjct: 258 DTVVNFLSFFMIHLARHPELVAELRSDPLK------------------LMRGAEEMFRRF 299
Query: 381 PSLPQLDRISV-KKYKLPNTDLTLDVGTKISIPTFAIHYDPEYYPDPEKFDPERFSPENI 439
P + + ++ ++YK + L G I +PT D P+P K D FS +I
Sbjct: 300 PVVSEARMVAKDQEYK----GVFLKRGDMILLPTALHGLDDAANPEPWKLD---FSRRSI 352
Query: 440 ESRPHYTYLPFGDGPRNCIGMRFGTIQFKIGLAQLISNF-EFS 481
H T FG GP C GM ++ + L + + EFS
Sbjct: 353 S---HST---FGGGPHRCAGMHLARMEVIVTLEEWLKRIPEFS 389
>pdb|3CXX|A Chain A, Crystal Structure Of Cytochrome P450 Cyp121 F338h From M.
Tuberculosis
Length = 396
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/174 (20%), Positives = 71/174 (40%), Gaps = 29/174 (16%)
Query: 303 MTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEI 362
++D++ FF G ++ S LT L L + P +++ L +
Sbjct: 218 VSDELFATIGVTFFGAGVISTGSFLTTALISLIQRPQLRNLLHE---------------- 261
Query: 363 CHKMSYLDKVTKEALRMYPSLPQ-LDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPE 421
K + +E LR+ S L R++ ++ D+ + G + + ++DPE
Sbjct: 262 --KPELIPAGVEELLRINLSFADGLPRLATADIQV--GDVLVRKGELVLVLLEGANFDPE 317
Query: 422 YYPDPEKFDPERFSPENIESRPHYTYLPFGDGPRNCIGMRFGTIQFKIGLAQLI 475
++P+P + +R +P ++L G G C G G +IG+ L+
Sbjct: 318 HFPNPGSIELDRPNP--------TSHLAHGRGQHFCPGSALGRRHAQIGIEALL 363
>pdb|3NV5|A Chain A, Crystal Structure Of Cytochrome P450 Cyp101d2
pdb|3NV6|A Chain A, Crystal Structure Of Camphor-Bound Cyp101d2
Length = 452
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 70/163 (42%), Gaps = 33/163 (20%)
Query: 321 ETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSYLDKVTKEALRMY 380
+T + L+F + LAR+P++ ++LR + + L + +E R +
Sbjct: 293 DTVVNFLSFFMIHLARHPELVAELRSDPLK------------------LMRGAEEMFRRF 334
Query: 381 PSLPQLDRISV-KKYKLPNTDLTLDVGTKISIPTFAIHYDPEYYPDPEKFDPERFSPENI 439
P + + ++ ++YK + L G I +PT D P+P K D FS +I
Sbjct: 335 PVVSEARMVAKDQEYK----GVFLKRGDMILLPTALHGLDDAANPEPWKLD---FSRRSI 387
Query: 440 ESRPHYTYLPFGDGPRNCIGMRFGTIQFKIGLAQLISNF-EFS 481
H T FG GP C GM ++ + L + + EFS
Sbjct: 388 S---HST---FGGGPHRCAGMHLARMEVIVTLEEWLKRIPEFS 424
>pdb|2ZUJ|A Chain A, Crystal Structure Of Camphor-Soaked Ferric Cytochrome
P450cam Mutant(D297l)
Length = 415
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 57/276 (20%), Positives = 108/276 (39%), Gaps = 48/276 (17%)
Query: 228 VLQMLKAVLSELIPLIKYLNLKIFDPRISQFFSNLVKTNLSY-----REKNNIKRDDFLN 282
+ +L + E IP +KYL ++ P S F+ + Y ++ D ++
Sbjct: 163 IFMLLAGLPEEDIPHLKYLTDQMTRPDGSMTFAEAKEALYDYLIPIIEQRRQKPGTDAIS 222
Query: 283 IMMQLQIAQRGKTLSPDDVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQS 342
I+ Q+ R +T D + GG +T + L+F + LA++P+
Sbjct: 223 IVANGQVNGR---------PITSDEAKRMCGLLLVGGLDTVVNFLSFSMEFLAKSPE--- 270
Query: 343 KLRQEIMATKKKEGELTYEICHKMSYLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLT 402
RQE++ ++ + +E LR + SL L RI Y+ +
Sbjct: 271 -HRQELIERPER--------------IPAACEELLRRF-SLVALGRILTSDYEF--HGVQ 312
Query: 403 LDVGTKISIPTFAIHYDPEYYPDPEKFDPERFSPENIE-SRPHYTYLPFGDGPRNCIGMR 461
L G +I +P D + E P +++ SR ++ FG G C+G
Sbjct: 313 LKKGDQILLPQMLSGLD----------ERENACPMHVDFSRQKVSHTTFGHGSHLCLGQH 362
Query: 462 FGTIQFKIGLAQLISNF-EFSIDSANATFEYLKGSI 496
+ + L + ++ +FSI + A ++ G +
Sbjct: 363 LARREIIVTLKEWLTRIPDFSI-APGAQIQHKSGIV 397
>pdb|2Z3T|A Chain A, Crystal Structure Of Substrate Free Cytochrome P450 Stap
(cyp245a1)
pdb|2Z3T|B Chain B, Crystal Structure Of Substrate Free Cytochrome P450 Stap
(cyp245a1)
pdb|2Z3T|C Chain C, Crystal Structure Of Substrate Free Cytochrome P450 Stap
(cyp245a1)
pdb|2Z3T|D Chain D, Crystal Structure Of Substrate Free Cytochrome P450 Stap
(cyp245a1)
pdb|2Z3U|A Chain A, Crystal Structure Of Chromopyrrolic Acid Bound Cytochrome
P450 Stap (Cyp245a1)
pdb|3A1L|A Chain A, Crystal Structure Of 11,11'-Dichlorochromopyrrolic Acid
Bound Cytochrome P450 Stap (Cyp245a1)
Length = 425
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 35/173 (20%), Positives = 65/173 (37%), Gaps = 29/173 (16%)
Query: 306 DVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHK 365
D I G+ET+++ L + L + D+ +LR +T EL
Sbjct: 242 DGIVGTCVHLLTAGHETTTNFLAKAVLTLRAHRDVLDELRTTPESTPAAVEEL------- 294
Query: 366 MSYLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPEYYPD 425
+R P + + R + + +L + D+ G+++ + + DP +PD
Sbjct: 295 -----------MRYDPPVQAVTRWAYEDIRLGDHDIPR--GSRVVALLGSANRDPARFPD 341
Query: 426 PEKFDPERFSPENIESRPHYTYLPFGDGPRNCIGMRFGTIQFKIGLAQLISNF 478
P+ D R + + FG G C+G + +IGL L+
Sbjct: 342 PDVLDVHRAAERQVG---------FGLGIHYCLGATLARAEAEIGLRALLDGI 385
>pdb|2GQX|A Chain A, Crystal Structure Of Cytochrome P450cam Mutant
(F87wY96FL244AV247LC334A) WITH PENTACHLOROBENZENE
pdb|2GQX|B Chain B, Crystal Structure Of Cytochrome P450cam Mutant
(F87wY96FL244AV247LC334A) WITH PENTACHLOROBENZENE
pdb|2GR6|A Chain A, Crystal Structure Of Cytochrome P450cam Mutant
(F87wY96FL244AV247LC334A)
pdb|2GR6|B Chain B, Crystal Structure Of Cytochrome P450cam Mutant
(F87wY96FL244AV247LC334A)
Length = 405
Score = 37.4 bits (85), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 56/276 (20%), Positives = 107/276 (38%), Gaps = 48/276 (17%)
Query: 228 VLQMLKAVLSELIPLIKYLNLKIFDPRISQFFSNLVKTNLSY-----REKNNIKRDDFLN 282
+ +L + E IP +KYL ++ P S F+ + Y ++ D ++
Sbjct: 153 IFMLLAGLPEEDIPHLKYLTDQMTRPDGSMTFAEAKEALYDYLIPIIEQRRQKPGTDAIS 212
Query: 283 IMMQLQIAQRGKTLSPDDVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQS 342
I+ Q+ R +T D GG +T + L+F + LA++P+
Sbjct: 213 IVANGQVNGR---------PITSDEAKRMCGALLLGGLDTVVNFLSFSMEFLAKSPE--- 260
Query: 343 KLRQEIMATKKKEGELTYEICHKMSYLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLT 402
RQE++ ++ + +E LR + SL RI Y+ +
Sbjct: 261 -HRQELIERPER--------------IPAACEELLRRF-SLVADGRILTSDYEF--HGVQ 302
Query: 403 LDVGTKISIPTFAIHYDPEYYPDPEKFDPERFSPENIE-SRPHYTYLPFGDGPRNCIGMR 461
L G +I +P D + E +P +++ SR ++ FG G C+G
Sbjct: 303 LKKGDQILLPQMLSGLD----------ERENAAPMHVDFSRQKVSHTTFGHGSHLCLGQH 352
Query: 462 FGTIQFKIGLAQLISNF-EFSIDSANATFEYLKGSI 496
+ + L + ++ +FSI + A ++ G +
Sbjct: 353 LARREIIVTLKEWLTRIPDFSI-APGAQIQHKSGIV 387
>pdb|1UED|A Chain A, Crystal Structure Of Oxyc A Cytochrome P450 Implicated In
An Oxidative C-C Coupling Reaction During Vancomycin
Biosynthesis.
pdb|1UED|B Chain B, Crystal Structure Of Oxyc A Cytochrome P450 Implicated In
An Oxidative C-C Coupling Reaction During Vancomycin
Biosynthesis
Length = 406
Score = 37.4 bits (85), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 79/387 (20%), Positives = 136/387 (35%), Gaps = 76/387 (19%)
Query: 97 ELYKYILIKDFDHFVDRGIGESDAKRDPIEGHLFGSKGEY----WKRLRNKLSPTFTSGK 152
E+ + IL D +HF R +E G Y RLR L+P FT +
Sbjct: 62 EVVRRIL-GDHEHFTTRPQFTQSKSGAHVEAQFVGQISTYDPPEHTRLRKMLTPEFTVRR 120
Query: 153 IKYMFPLIKKCSDQLITTIRKQIGESKQMSLEVKDYCARYTTDVIGSTAFGIEINSLENP 212
I+ M P I+ D R + E++ S +++ A D +G+ A + +
Sbjct: 121 IRRMEPAIQSLIDD-----RLDLLEAEGPSADLQGLFA----DPVGAHALCELLGIPRDD 171
Query: 213 DSEFRQVSLLVMKPSVLQMLKAVLSELIPLIKYLNLKIFDPRISQFFSNLVKTNLSYREK 272
EF V + + + LKA ++ +YL+ NL R++
Sbjct: 172 QREF--VRRIRRNADLSRGLKARAADSAAFNRYLD------------------NLLARQR 211
Query: 273 NNIKRDDFLNIMMQLQIAQRGKTLSPDDVEMTDDVITAQSFVFFFGGYETSSSVLTFCLY 332
+ DD L M+ + G + TD+ + GG ET + ++ F +
Sbjct: 212 ADP--DDGLLGMI---VRDHGDNV-------TDEELKGLCTALILGGVETVAGMIGFGVL 259
Query: 333 ELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSYLDKVTKEALR-MYPSLPQLDRISV 391
L NP + EL +E K ++V E +R + P R+++
Sbjct: 260 ALLDNP---------------GQIELLFESPEKA---ERVVNELVRYLSPVQAPNPRLAI 301
Query: 392 KKYKLPNTDLTLDVGTKISIPTFAIHYDPEYYPDPEKFDPERFSPENIESRPHYTYLPFG 451
K + + G + + D PDP+ D R + ++ FG
Sbjct: 302 KDVVIDGQ--LIKAGDYVLCSILMANRDEALTPDPDVLDANRAAVSDVG---------FG 350
Query: 452 DGPRNCIGMRFGTIQFKIGLAQLISNF 478
G C+G ++ L F
Sbjct: 351 HGIHYCVGAALARSMLRMAYQTLWRRF 377
>pdb|2NZ5|A Chain A, Structure And Function Studies Of Cytochrome P450 158a1
From Streptomyces Coelicolor A3(2)
pdb|2NZ5|B Chain B, Structure And Function Studies Of Cytochrome P450 158a1
From Streptomyces Coelicolor A3(2)
pdb|2NZA|A Chain A, Structure And Function Studies Of Cytochrome P450 158a1
From Streptomyces Coelicolor A3(2)
pdb|2NZA|B Chain B, Structure And Function Studies Of Cytochrome P450 158a1
From Streptomyces Coelicolor A3(2)
Length = 413
Score = 37.4 bits (85), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 33/151 (21%), Positives = 61/151 (40%), Gaps = 27/151 (17%)
Query: 319 GYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSYLDKVTKEALR 378
G E + + LY L ++ +++R+ A EL I H+ S
Sbjct: 245 GGEAVTHNVGQMLYLLLTRRELMARMRERPGARGTALDELLRWISHRTSV---------- 294
Query: 379 MYPSLPQLDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPEYYPDPEKFDPERFSPEN 438
L RI+++ ++ T + G + + A + DP+ +PDP++ D +R
Sbjct: 295 ------GLARIALEDVEVHGTRIA--AGEPVYVSYLAANRDPDVFPDPDRIDLDR----- 341
Query: 439 IESRPHYTYLPFGDGPRNCIGMRFGTIQFKI 469
+ PH Y G+G C G +Q ++
Sbjct: 342 -DPNPHLAY---GNGHHFCTGAVLARMQTEL 368
>pdb|2DKK|A Chain A, Structure/function Studies Of Cytochrome P450 158a1 From
Streptomyces Coelicolor A3(2)
Length = 411
Score = 37.0 bits (84), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 33/151 (21%), Positives = 61/151 (40%), Gaps = 27/151 (17%)
Query: 319 GYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSYLDKVTKEALR 378
G E + + LY L ++ +++R+ A EL I H+ S
Sbjct: 245 GGEAVTHNVGQMLYLLLTRRELMARMRERPGARGTALDELLRWISHRTSV---------- 294
Query: 379 MYPSLPQLDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPEYYPDPEKFDPERFSPEN 438
L RI+++ ++ T + G + + A + DP+ +PDP++ D +R
Sbjct: 295 ------GLARIALEDVEVHGTRIA--AGEPVYVSYLAANRDPDVFPDPDRIDLDR----- 341
Query: 439 IESRPHYTYLPFGDGPRNCIGMRFGTIQFKI 469
+ PH Y G+G C G +Q ++
Sbjct: 342 -DPNPHLAY---GNGHHFCTGAVLARMQTEL 368
>pdb|2ZUH|A Chain A, Crystal Structure Of Camphor-Soaked Ferric Cytochrome
P450cam Mutant (D297a)
Length = 415
Score = 37.0 bits (84), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 56/276 (20%), Positives = 107/276 (38%), Gaps = 48/276 (17%)
Query: 228 VLQMLKAVLSELIPLIKYLNLKIFDPRISQFFSNLVKTNLSY-----REKNNIKRDDFLN 282
+ +L + E IP +KYL ++ P S F+ + Y ++ D ++
Sbjct: 163 IFMLLAGLPEEDIPHLKYLTDQMTRPDGSMTFAEAKEALYDYLIPIIEQRRQKPGTDAIS 222
Query: 283 IMMQLQIAQRGKTLSPDDVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQS 342
I+ Q+ R +T D + GG +T + L+F + LA++P+
Sbjct: 223 IVANGQVNGR---------PITSDEAKRMCGLLLVGGLDTVVNFLSFSMEFLAKSPE--- 270
Query: 343 KLRQEIMATKKKEGELTYEICHKMSYLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLT 402
RQE++ ++ + +E LR + SL RI Y+ +
Sbjct: 271 -HRQELIERPER--------------IPAACEELLRRF-SLVAAGRILTSDYEF--HGVQ 312
Query: 403 LDVGTKISIPTFAIHYDPEYYPDPEKFDPERFSPENIE-SRPHYTYLPFGDGPRNCIGMR 461
L G +I +P D + E P +++ SR ++ FG G C+G
Sbjct: 313 LKKGDQILLPQMLSGLD----------ERENACPMHVDFSRQKVSHTTFGHGSHLCLGQH 362
Query: 462 FGTIQFKIGLAQLISNF-EFSIDSANATFEYLKGSI 496
+ + L + ++ +FSI + A ++ G +
Sbjct: 363 LARREIIVTLKEWLTRIPDFSI-APGAQIQHKSGIV 397
>pdb|3VOO|A Chain A, Cytochrome P450sp Alpha (cyp152b1) Mutant A245e
Length = 407
Score = 37.0 bits (84), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 23/136 (16%), Positives = 57/136 (41%), Gaps = 9/136 (6%)
Query: 362 ICHKMSYLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPE 421
+ + Y + +E R YP P + + + ++ + G ++ + + ++D
Sbjct: 259 LVQQPDYAELFVQEVRRFYPFFPAVVARASQDFEWEG--MAFPEGRQVVLDLYGSNHDAA 316
Query: 422 YYPDPEKFDPERFSPENIESRPHYTYLPFGDG----PRNCIGMRFGTIQFKIGLAQLISN 477
+ DP++F PERF + +S + ++P G G C G K+ L++
Sbjct: 317 TWADPQEFRPERFRAWDEDS---FNFIPQGGGDHYLGHRCPGEWIVLAIMKVAAHLLVNA 373
Query: 478 FEFSIDSANATFEYLK 493
+ + + + ++ +
Sbjct: 374 MRYDVPDQDLSIDFAR 389
>pdb|3VM4|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) In Complex With
(R)-Ibuprophen
Length = 407
Score = 37.0 bits (84), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 23/136 (16%), Positives = 57/136 (41%), Gaps = 9/136 (6%)
Query: 362 ICHKMSYLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPE 421
+ + Y + +E R YP P + + + ++ + G ++ + + ++D
Sbjct: 259 LVQQPDYAELFVQEVRRFYPFFPAVVARASQDFEWEG--MAFPEGRQVVLDLYGSNHDAA 316
Query: 422 YYPDPEKFDPERFSPENIESRPHYTYLPFGDG----PRNCIGMRFGTIQFKIGLAQLISN 477
+ DP++F PERF + +S + ++P G G C G K+ L++
Sbjct: 317 TWADPQEFRPERFRAWDEDS---FNFIPQGGGDHYLGHRCPGEWIVLAIMKVAAHLLVNA 373
Query: 478 FEFSIDSANATFEYLK 493
+ + + + ++ +
Sbjct: 374 MRYDVPDQDLSIDFAR 389
>pdb|1IZO|A Chain A, Cytochrome P450 Bs Beta Complexed With Fatty Acid
pdb|1IZO|B Chain B, Cytochrome P450 Bs Beta Complexed With Fatty Acid
pdb|1IZO|C Chain C, Cytochrome P450 Bs Beta Complexed With Fatty Acid
pdb|2ZQX|A Chain A, Cytochrome P450bsbeta Cocrystallized With Heptanoic Acid
pdb|2ZQX|B Chain B, Cytochrome P450bsbeta Cocrystallized With Heptanoic Acid
pdb|2ZQX|C Chain C, Cytochrome P450bsbeta Cocrystallized With Heptanoic Acid
pdb|2ZQJ|A Chain A, Substrate-Free Form Of Cytochrome P450bsbeta
pdb|2ZQJ|B Chain B, Substrate-Free Form Of Cytochrome P450bsbeta
pdb|2ZQJ|C Chain C, Substrate-Free Form Of Cytochrome P450bsbeta
Length = 417
Score = 37.0 bits (84), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 48/116 (41%), Gaps = 13/116 (11%)
Query: 373 TKEALRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPEYYPDPEKFDPE 432
+E R YP P L + K + N + GT + + + ++DP + P++F PE
Sbjct: 280 VQEVRRYYPFGPFLGALVKKDFVWNNCEFK--KGTSVLLDLYGTNHDPRLWDHPDEFRPE 337
Query: 433 RFS--PENIESRPHYTYLPFGDG----PRNCIGMRFGTIQFKIGLAQLISNFEFSI 482
RF+ EN+ + +P G G C G K L L+ E+ +
Sbjct: 338 RFAEREENL-----FDMIPQGGGHAEKGHRCPGEGITIEVMKASLDFLVHQIEYDV 388
>pdb|3VNO|A Chain A, Cytochrome P450sp Alpha (cyp152b1) Mutant R241e
Length = 407
Score = 36.6 bits (83), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 23/136 (16%), Positives = 57/136 (41%), Gaps = 9/136 (6%)
Query: 362 ICHKMSYLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPE 421
+ + Y + +E R YP P + + + ++ + G ++ + + ++D
Sbjct: 259 LVQQPDYAELFVQEVRRFYPFFPAVVARASQDFEWEG--MAFPEGRQVVLDLYGSNHDAA 316
Query: 422 YYPDPEKFDPERFSPENIESRPHYTYLPFGDG----PRNCIGMRFGTIQFKIGLAQLISN 477
+ DP++F PERF + +S + ++P G G C G K+ L++
Sbjct: 317 TWADPQEFRPERFRAWDEDS---FNFIPQGGGDHYLGHRCPGEWIVLAIMKVAAHLLVNA 373
Query: 478 FEFSIDSANATFEYLK 493
+ + + + ++ +
Sbjct: 374 MRYDVPDQDLSIDFAR 389
>pdb|3AWQ|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) Mutant L78f
Length = 415
Score = 36.6 bits (83), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 23/136 (16%), Positives = 57/136 (41%), Gaps = 9/136 (6%)
Query: 362 ICHKMSYLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPE 421
+ + Y + +E R YP P + + + ++ + G ++ + + ++D
Sbjct: 267 LVQQPDYAELFVQEVRRFYPFFPAVVARASQDFEWEG--MAFPEGRQVVLDLYGSNHDAA 324
Query: 422 YYPDPEKFDPERFSPENIESRPHYTYLPFGDG----PRNCIGMRFGTIQFKIGLAQLISN 477
+ DP++F PERF + +S + ++P G G C G K+ L++
Sbjct: 325 TWADPQEFRPERFRAWDEDS---FNFIPQGGGDHYLGHRCPGEWIVLAIMKVAAHLLVNA 381
Query: 478 FEFSIDSANATFEYLK 493
+ + + + ++ +
Sbjct: 382 MRYDVPDQDLSIDFAR 397
>pdb|2H7R|A Chain A, L244a Mutant Of Cytochrome P450cam Complexed With
Imidazole
pdb|2H7S|A Chain A, L244a Mutant Of Cytochrome P450cam
pdb|2H7S|C Chain C, L244a Mutant Of Cytochrome P450cam
Length = 414
Score = 36.6 bits (83), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 56/276 (20%), Positives = 107/276 (38%), Gaps = 48/276 (17%)
Query: 228 VLQMLKAVLSELIPLIKYLNLKIFDPRISQFFSNLVKTNLSY-----REKNNIKRDDFLN 282
+ +L + E IP +KYL ++ P S F+ + Y ++ D ++
Sbjct: 162 IFMLLAGLPEEDIPHLKYLTDQMTRPDGSMTFAEAKEALYDYLIPIIEQRRQKPGTDAIS 221
Query: 283 IMMQLQIAQRGKTLSPDDVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQS 342
I+ Q+ R +T D GG +T + L+F + LA++P+
Sbjct: 222 IVANGQVNGR---------PITSDEAKRMCGALLVGGLDTVVNFLSFSMEFLAKSPE--- 269
Query: 343 KLRQEIMATKKKEGELTYEICHKMSYLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLT 402
RQE++ ++ + +E LR + SL RI Y+ +
Sbjct: 270 -HRQELIERPER--------------IPAACEELLRRF-SLVADGRILTSDYEF--HGVQ 311
Query: 403 LDVGTKISIPTFAIHYDPEYYPDPEKFDPERFSPENIE-SRPHYTYLPFGDGPRNCIGMR 461
L G +I +P D + E +P +++ SR ++ FG G C+G
Sbjct: 312 LKKGDQILLPQMLSGLD----------ERENAAPMHVDFSRQKVSHTTFGHGSHLCLGQH 361
Query: 462 FGTIQFKIGLAQLISNF-EFSIDSANATFEYLKGSI 496
+ + L + ++ +FSI + A ++ G +
Sbjct: 362 LARREIIVTLKEWLTRIPDFSI-APGAQIQHKSGIV 396
>pdb|3AWM|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) Wild-Type With Palmitic
Acid
Length = 415
Score = 36.6 bits (83), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 23/136 (16%), Positives = 57/136 (41%), Gaps = 9/136 (6%)
Query: 362 ICHKMSYLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPE 421
+ + Y + +E R YP P + + + ++ + G ++ + + ++D
Sbjct: 267 LVQQPDYAELFVQEVRRFYPFFPAVVARASQDFEWEG--MAFPEGRQVVLDLYGSNHDAA 324
Query: 422 YYPDPEKFDPERFSPENIESRPHYTYLPFGDG----PRNCIGMRFGTIQFKIGLAQLISN 477
+ DP++F PERF + +S + ++P G G C G K+ L++
Sbjct: 325 TWADPQEFRPERFRAWDEDS---FNFIPQGGGDHYLGHRCPGEWIVLAIMKVAAHLLVNA 381
Query: 478 FEFSIDSANATFEYLK 493
+ + + + ++ +
Sbjct: 382 MRYDVPDQDLSIDFAR 397
>pdb|1QMQ|A Chain A, Optical Detection Of Cytochrome P450 By Sensitizer-Linked
Substrates
pdb|1GJM|A Chain A, Covalent Attachment Of An Electroactive Sulphydryl Reagent
In The Active Site Of Cytochrome P450cam
pdb|1K2O|A Chain A, Cytochrome P450cam With Bound
Bis(2,2'-Bipyridine)-(5-Methyl-2-2'-
Bipyridine)-C2-Adamantane Ruthenium (Ii)
pdb|1K2O|B Chain B, Cytochrome P450cam With Bound
Bis(2,2'-Bipyridine)-(5-Methyl-2-2'-
Bipyridine)-C2-Adamantane Ruthenium (Ii)
pdb|1T87|A Chain A, Crystal Structure Of The Ferrous Co-Bound Cytochrome
P450cam (C334a)
pdb|1T87|B Chain B, Crystal Structure Of The Ferrous Co-Bound Cytochrome
P450cam (C334a)
pdb|1T88|A Chain A, Crystal Structure Of The Ferrous Cytochrome P450cam
(C334a)
pdb|1T88|B Chain B, Crystal Structure Of The Ferrous Cytochrome P450cam
(C334a)
pdb|3L61|A Chain A, Crystal Structure Of Substrate-Free P450cam At 200 Mm [k+]
pdb|3L62|A Chain A, Crystal Structure Of Substrate-Free P450cam At Low [k+]
pdb|3L63|A Chain A, Crystal Structure Of Camphor-Bound P450cam At Low [k+]
pdb|3OIA|A Chain A, Crystal Structure Of Cytochrome P450cam Crystallized In
The Presence Of A Tethered Substrate Analog
Adac1-C8gluetg-Bio
pdb|3OL5|A Chain A, Crystal Structure Of Cytochrome P450cam Crystallized With
A Tethered Substrate Analog 3oh-Adac1-C8-Dans
pdb|3P6M|A Chain A, Crystal Structure Of Cytochrome P450cam Crystallized In
The Presence Of A Tethered Substrate Analog
Adac1-C8-Dans
pdb|3P6N|A Chain A, Crystal Structure Of Cytochrome P450cam Crystallized In
The Presence Of A Tethered Substrate Analog
Adac1-C8-Dans
pdb|3P6O|A Chain A, Crystal Structure Of Cytochrome P450cam Crystallized In
The Presence Of A Tethered Substrate Analog
Adac1-Etg-Dans
pdb|3P6P|A Chain A, Crystal Structure Of Cytochrome P450cam Crystallized In
The Presence Of A Tethered Substrate Analog Adac1-C6-Bio
pdb|3P6Q|A Chain A, Crystal Structure Of Cytochrome P450cam Crystallized In
The Presence Of A Tethered Substrate Analog
Adac2-Etg-Boc
pdb|3P6R|A Chain A, Crystal Structure Of Cytochrome P450cam Crystallized In
The Presence Of A Tethered Substrate Analog
3oh-Adac1-Etg-Boc
pdb|3P6S|A Chain A, Crystal Structure Of Cytochrome P450cam Crystallized In
The Presence Of A Tethered Substrate Analog
Adac2-C8-Dans
pdb|3P6T|A Chain A, Crystal Structure Of Cytochrome P450cam Crystallized In
The Presence Of A Tethered Substrate Analog
Adac2-C8-Dans
pdb|3P6U|A Chain A, Crystal Structure Of Cytochrome P450cam Crystallized In
The Presence Of A Tethered Substrate Analog
Adac3-C6-Dans
pdb|3P6V|A Chain A, Crystal Structure Of Cytochrome P450cam Crystallized In
The Presence Of A Tethered Substrate Analog
3et-Adac1-Etg-Boc
pdb|3P6W|A Chain A, Crystal Structure Of Cytochrome P450cam Crystallized In
The Presence Of A Tethered Substrate Analog
Adac3-Etg-Boc
pdb|3P6X|A Chain A, Crystal Structure Of Cytochrome P450cam Crystallized In
The Presence Of A Tethered Substrate Analog
Adac3-C8-Dans
pdb|4G3R|A Chain A, Crystal Structure Of Nitrosyl Cytochrome P450cam
pdb|4G3R|B Chain B, Crystal Structure Of Nitrosyl Cytochrome P450cam
Length = 414
Score = 36.6 bits (83), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 56/276 (20%), Positives = 108/276 (39%), Gaps = 48/276 (17%)
Query: 228 VLQMLKAVLSELIPLIKYLNLKIFDPRISQFFSNLVKTNLSY-----REKNNIKRDDFLN 282
+ +L + E IP +KYL ++ P S F+ + Y ++ D ++
Sbjct: 162 IFMLLAGLPEEDIPHLKYLTDQMTRPDGSMTFAEAKEALYDYLIPIIEQRRQKPGTDAIS 221
Query: 283 IMMQLQIAQRGKTLSPDDVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQS 342
I+ Q+ R +T D + GG +T + L+F + LA++P+
Sbjct: 222 IVANGQVNGR---------PITSDEAKRMCGLLLVGGLDTVVNFLSFSMEFLAKSPE--- 269
Query: 343 KLRQEIMATKKKEGELTYEICHKMSYLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLT 402
RQE++ ++ + +E LR + SL RI Y+ +
Sbjct: 270 -HRQELIERPER--------------IPAACEELLRRF-SLVADGRILTSDYEF--HGVQ 311
Query: 403 LDVGTKISIPTFAIHYDPEYYPDPEKFDPERFSPENIE-SRPHYTYLPFGDGPRNCIGMR 461
L G +I +P D + E +P +++ SR ++ FG G C+G
Sbjct: 312 LKKGDQILLPQMLSGLD----------ERENAAPMHVDFSRQKVSHTTFGHGSHLCLGQH 361
Query: 462 FGTIQFKIGLAQLISNF-EFSIDSANATFEYLKGSI 496
+ + L + ++ +FSI + A ++ G +
Sbjct: 362 LARREIIVTLKEWLTRIPDFSI-APGAQIQHKSGIV 396
>pdb|3EJB|B Chain B, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|D Chain D, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|F Chain F, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|H Chain H, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|B Chain B, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|D Chain D, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|F Chain F, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|H Chain H, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|B Chain B, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|D Chain D, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|F Chain F, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|H Chain H, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
Length = 404
Score = 36.6 bits (83), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 41/192 (21%), Positives = 86/192 (44%), Gaps = 34/192 (17%)
Query: 302 EMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQ--EIMATKKKEGELT 359
++T++ + + G+ET+ ++++ + L ++P+ KLR+ +++ T +E L
Sbjct: 218 KLTEEEAASTCILLAIAGHETTVNLISNSVLCLLQHPEQLLKLRENPDLIGTAVEEC-LR 276
Query: 360 YEICHKMSYLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYD 419
YE +M+ +V E + + +T+ G ++ + A + D
Sbjct: 277 YESPTQMTA--RVASEDIDI-------------------CGVTIRQGEQVYLLLGAANRD 315
Query: 420 PEYYPDPEKFDPERFSPENIESRPHYTYLPFGDGPRNCIGMRFGTIQFKIGLAQLISNFE 479
P + +P+ FD R SP PH L FG G C+G ++ +I + L+
Sbjct: 316 PSIFTNPDVFDITR-SPN-----PH---LSFGHGHHVCLGSSLARLEAQIAINTLLQRMP 366
Query: 480 FSIDSANATFEY 491
S++ A+ + Y
Sbjct: 367 -SLNLADFEWRY 377
>pdb|2A1M|A Chain A, Crystal Structure Of Ferrous Dioxygen Complex Of Wild-Type
Cytochrome P450cam
pdb|2A1M|B Chain B, Crystal Structure Of Ferrous Dioxygen Complex Of Wild-Type
Cytochrome P450cam
Length = 415
Score = 36.6 bits (83), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 56/276 (20%), Positives = 108/276 (39%), Gaps = 48/276 (17%)
Query: 228 VLQMLKAVLSELIPLIKYLNLKIFDPRISQFFSNLVKTNLSY-----REKNNIKRDDFLN 282
+ +L + E IP +KYL ++ P S F+ + Y ++ D ++
Sbjct: 163 IFMLLAGLPEEDIPHLKYLTDQMTRPDGSMTFAEAKEALYDYLIPIIEQRRQKPGTDAIS 222
Query: 283 IMMQLQIAQRGKTLSPDDVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQS 342
I+ Q+ R +T D + GG +T + L+F + LA++P+
Sbjct: 223 IVANGQVNGR---------PITSDEAKRMCGLLLVGGLDTVVNFLSFSMEFLAKSPE--- 270
Query: 343 KLRQEIMATKKKEGELTYEICHKMSYLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLT 402
RQE++ ++ + +E LR + SL RI Y+ +
Sbjct: 271 -HRQELIERPER--------------IPAACEELLRRF-SLVADGRILTSDYEF--HGVQ 312
Query: 403 LDVGTKISIPTFAIHYDPEYYPDPEKFDPERFSPENIE-SRPHYTYLPFGDGPRNCIGMR 461
L G +I +P D + E +P +++ SR ++ FG G C+G
Sbjct: 313 LKKGDQILLPQMLSGLD----------ERENAAPMHVDFSRQKVSHTTFGHGSHLCLGQH 362
Query: 462 FGTIQFKIGLAQLISNF-EFSIDSANATFEYLKGSI 496
+ + L + ++ +FSI + A ++ G +
Sbjct: 363 LARREIIVTLKEWLTRIPDFSI-APGAQIQHKSGIV 397
>pdb|2LQD|A Chain A, Reduced And Co-Bound Cytochrome P450cam (Cyp101a1)
Length = 405
Score = 36.2 bits (82), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 56/276 (20%), Positives = 107/276 (38%), Gaps = 48/276 (17%)
Query: 228 VLQMLKAVLSELIPLIKYLNLKIFDPRISQFFSNLVKTNLSY-----REKNNIKRDDFLN 282
+ +L + E IP +KYL ++ P S F+ + Y ++ D ++
Sbjct: 153 IFMLLAGLPEEDIPHLKYLTDQMTRPDGSMTFAEAKEALYDYLIPIIEQRRQKPGTDAIS 212
Query: 283 IMMQLQIAQRGKTLSPDDVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQS 342
I+ Q+ R +T D + GG +T + L+F + LA++P+
Sbjct: 213 IVANGQVNGR---------PITSDEAKRMCGLLLVGGLDTVVNFLSFSMEFLAKSPE--- 260
Query: 343 KLRQEIMATKKKEGELTYEICHKMSYLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLT 402
RQE++ ++ + +E LR + SL RI Y+ +
Sbjct: 261 -HRQELIERPER--------------IPAACEELLRRF-SLVADGRILTSDYEF--HGVQ 302
Query: 403 LDVGTKISIPTFAIHYDPEYYPDPEKFDPERFSPENIE-SRPHYTYLPFGDGPRNCIGMR 461
L G +I +P D + E P +++ SR ++ FG G C+G
Sbjct: 303 LKKGDQILLPQMLSGLD----------ERENACPMHVDFSRQKVSHTTFGHGSHLCLGQH 352
Query: 462 FGTIQFKIGLAQLISNF-EFSIDSANATFEYLKGSI 496
+ + L + ++ +FSI + A ++ G +
Sbjct: 353 LARREIIVTLKEWLTRIPDFSI-APGAQIQHKSGIV 387
>pdb|2FER|A Chain A, P450cam From Pseudomonas Putida Reconstituted With
Manganic Protoporphyrin Ix
pdb|2FEU|A Chain A, P450cam From Pseudomonas Putida Reconstituted With
Manganic Protoporphyrin Ix
pdb|2FEU|B Chain B, P450cam From Pseudomonas Putida Reconstituted With
Manganic Protoporphyrin Ix
Length = 411
Score = 36.2 bits (82), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 56/276 (20%), Positives = 107/276 (38%), Gaps = 48/276 (17%)
Query: 228 VLQMLKAVLSELIPLIKYLNLKIFDPRISQFFSNLVKTNLSY-----REKNNIKRDDFLN 282
+ +L + E IP +KYL ++ P S F+ + Y ++ D ++
Sbjct: 153 IFMLLAGLPEEDIPHLKYLTDQMTRPDGSMTFAEAKEALYDYLIPIIEQRRQKPGTDAIS 212
Query: 283 IMMQLQIAQRGKTLSPDDVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQS 342
I+ Q+ R +T D + GG +T + L+F + LA++P+
Sbjct: 213 IVANGQVNGR---------PITSDEAKRMCGLLLVGGLDTVVNFLSFSMEFLAKSPE--- 260
Query: 343 KLRQEIMATKKKEGELTYEICHKMSYLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLT 402
RQE++ ++ + +E LR + SL RI Y+ +
Sbjct: 261 -HRQELIERPER--------------IPAACEELLRRF-SLVADGRILTSDYEF--HGVQ 302
Query: 403 LDVGTKISIPTFAIHYDPEYYPDPEKFDPERFSPENIE-SRPHYTYLPFGDGPRNCIGMR 461
L G +I +P D + E P +++ SR ++ FG G C+G
Sbjct: 303 LKKGDQILLPQMLSGLD----------ERENACPMHVDFSRQKVSHTTFGHGSHLCLGQH 352
Query: 462 FGTIQFKIGLAQLISNF-EFSIDSANATFEYLKGSI 496
+ + L + ++ +FSI + A ++ G +
Sbjct: 353 LARREIIVTLKEWLTRIPDFSI-APGAQIQHKSGIV 387
>pdb|1IWJ|A Chain A, Putidaredoxin-Binding Stablilizes An Active Conformer Of
Cytochrome P450cam In Its Reduced State; Crystal
Structure Of Mutant(109k) Cytochrome P450cam
Length = 415
Score = 36.2 bits (82), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 56/276 (20%), Positives = 107/276 (38%), Gaps = 48/276 (17%)
Query: 228 VLQMLKAVLSELIPLIKYLNLKIFDPRISQFFSNLVKTNLSY-----REKNNIKRDDFLN 282
+ +L + E IP +KYL ++ P S F+ + Y ++ D ++
Sbjct: 163 IFMLLAGLPEEDIPHLKYLTDQMTRPDGSMTFAEAKEALYDYLIPIIEQRRQKPGTDAIS 222
Query: 283 IMMQLQIAQRGKTLSPDDVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQS 342
I+ Q+ R +T D + GG +T + L+F + LA++P+
Sbjct: 223 IVANGQVNGR---------PITSDEAKRMCGLLLVGGLDTVVNFLSFSMEFLAKSPE--- 270
Query: 343 KLRQEIMATKKKEGELTYEICHKMSYLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLT 402
RQE++ ++ + +E LR + SL RI Y+ +
Sbjct: 271 -HRQELIERPER--------------IPAACEELLRRF-SLVADGRILTSDYEF--HGVQ 312
Query: 403 LDVGTKISIPTFAIHYDPEYYPDPEKFDPERFSPENIE-SRPHYTYLPFGDGPRNCIGMR 461
L G +I +P D + E P +++ SR ++ FG G C+G
Sbjct: 313 LKKGDQILLPQMLSGLD----------ERENACPMHVDFSRQKVSHTTFGHGSHLCLGQH 362
Query: 462 FGTIQFKIGLAQLISNF-EFSIDSANATFEYLKGSI 496
+ + L + ++ +FSI + A ++ G +
Sbjct: 363 LARREIIVTLKEWLTRIPDFSI-APGAQIQHKSGIV 397
>pdb|1IWK|A Chain A, Putidaredoxin-Binding Stablilizes An Active Conformer Of
Cytochrome P450cam In Its Reduced State; Crystal
Structure Of Mutant(112k) Cytochrome P450cam
Length = 415
Score = 36.2 bits (82), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 56/276 (20%), Positives = 107/276 (38%), Gaps = 48/276 (17%)
Query: 228 VLQMLKAVLSELIPLIKYLNLKIFDPRISQFFSNLVKTNLSY-----REKNNIKRDDFLN 282
+ +L + E IP +KYL ++ P S F+ + Y ++ D ++
Sbjct: 163 IFMLLAGLPEEDIPHLKYLTDQMTRPDGSMTFAEAKEALYDYLIPIIEQRRQKPGTDAIS 222
Query: 283 IMMQLQIAQRGKTLSPDDVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQS 342
I+ Q+ R +T D + GG +T + L+F + LA++P+
Sbjct: 223 IVANGQVNGR---------PITSDEAKRMCGLLLVGGLDTVVNFLSFSMEFLAKSPE--- 270
Query: 343 KLRQEIMATKKKEGELTYEICHKMSYLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLT 402
RQE++ ++ + +E LR + SL RI Y+ +
Sbjct: 271 -HRQELIERPER--------------IPAACEELLRRF-SLVADGRILTSDYEF--HGVQ 312
Query: 403 LDVGTKISIPTFAIHYDPEYYPDPEKFDPERFSPENIE-SRPHYTYLPFGDGPRNCIGMR 461
L G +I +P D + E P +++ SR ++ FG G C+G
Sbjct: 313 LKKGDQILLPQMLSGLD----------ERENACPMHVDFSRQKVSHTTFGHGSHLCLGQH 362
Query: 462 FGTIQFKIGLAQLISNF-EFSIDSANATFEYLKGSI 496
+ + L + ++ +FSI + A ++ G +
Sbjct: 363 LARREIIVTLKEWLTRIPDFSI-APGAQIQHKSGIV 397
>pdb|3DAM|A Chain A, Crystal Structure Of Allene Oxide Synthase
pdb|3DAN|A Chain A, Crystal Structure Of Allene Oxide Synthase
pdb|3DBM|A Chain A, Crystal Structure Of Allene Oxide Synthase
Length = 473
Score = 36.2 bits (82), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 76/176 (43%), Gaps = 25/176 (14%)
Query: 339 DIQSKLRQEIMATKKK--EGELTYEICHKMSYLDKVTKEALRMYPSLPQLDRISVKKYKL 396
++ ++L +EI K +G +T E +M V E+LR+ P +P + + +
Sbjct: 298 NLHTQLAEEIRGAIKSYGDGNVTLEAIEQMPLTKSVVYESLRIEPPVPPQYGKAKSNFTI 357
Query: 397 PNTDLTLDVGTK---ISIPTFAIHYDPEYYPDPEKFDPERFSPENIESRPHYTYLPFGDG 453
+ D T +V FA DP+ + PE++ P+RF + E+ Y + + +G
Sbjct: 358 ESHDATFEVKKGEMLFGYQPFATK-DPKVFDRPEEYVPDRFVGDG-EALLKYVW--WSNG 413
Query: 454 P---------RNCIGMRFGTIQFKIGLAQLISNFE-FSID------SANATFEYLK 493
P + C G F + ++ + +L ++ F I+ A T +LK
Sbjct: 414 PETESPTVENKQCAGKDFVVLITRLFVIELFRRYDSFEIELGESPLGAAVTLTFLK 469
>pdb|1DZ8|A Chain A, Oxygen Complex Of P450cam From Pseudomonas Putida
pdb|1DZ8|B Chain B, Oxygen Complex Of P450cam From Pseudomonas Putida
pdb|1DZ6|A Chain A, Ferrous P450cam From Pseudomonas Putida
pdb|1DZ6|B Chain B, Ferrous P450cam From Pseudomonas Putida
pdb|1DZ9|A Chain A, Putative Oxo Complex Of P450cam From Pseudomonas Putida
pdb|1DZ9|B Chain B, Putative Oxo Complex Of P450cam From Pseudomonas Putida
pdb|1DZ4|A Chain A, Ferric P450cam From Pseudomonas Putida
pdb|1DZ4|B Chain B, Ferric P450cam From Pseudomonas Putida
pdb|1O76|A Chain A, Cyanide Complex Of P450cam From Pseudomonas Putida
pdb|1O76|B Chain B, Cyanide Complex Of P450cam From Pseudomonas Putida
pdb|1UYU|A Chain A, Xenon Complex Of Wildtype P450cam From Pseudomonas Putida
pdb|1UYU|B Chain B, Xenon Complex Of Wildtype P450cam From Pseudomonas Putida
pdb|1AKD|A Chain A, Cytochrome P450cam From Pseudomonas Putida, Complexed With
1s-Camphor
Length = 414
Score = 36.2 bits (82), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 56/276 (20%), Positives = 107/276 (38%), Gaps = 48/276 (17%)
Query: 228 VLQMLKAVLSELIPLIKYLNLKIFDPRISQFFSNLVKTNLSY-----REKNNIKRDDFLN 282
+ +L + E IP +KYL ++ P S F+ + Y ++ D ++
Sbjct: 162 IFMLLAGLPEEDIPHLKYLTDQMTRPDGSMTFAEAKEALYDYLIPIIEQRRQKPGTDAIS 221
Query: 283 IMMQLQIAQRGKTLSPDDVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQS 342
I+ Q+ R +T D + GG +T + L+F + LA++P+
Sbjct: 222 IVANGQVNGR---------PITSDEAKRMCGLLLVGGLDTVVNFLSFSMEFLAKSPE--- 269
Query: 343 KLRQEIMATKKKEGELTYEICHKMSYLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLT 402
RQE++ ++ + +E LR + SL RI Y+ +
Sbjct: 270 -HRQELIQRPER--------------IPAACEELLRRF-SLVADGRILTSDYEF--HGVQ 311
Query: 403 LDVGTKISIPTFAIHYDPEYYPDPEKFDPERFSPENIE-SRPHYTYLPFGDGPRNCIGMR 461
L G +I +P D + E P +++ SR ++ FG G C+G
Sbjct: 312 LKKGDQILLPQMLSGLD----------ERENACPMHVDFSRQKVSHTTFGHGSHLCLGQH 361
Query: 462 FGTIQFKIGLAQLISNF-EFSIDSANATFEYLKGSI 496
+ + L + ++ +FSI + A ++ G +
Sbjct: 362 LARREIIVTLKEWLTRIPDFSI-APGAQIQHKSGIV 396
>pdb|2ZUI|A Chain A, Crystal Structure Of Camphor-Soaked Ferric Cytochrome
P450cam Mutant (D297n)
Length = 415
Score = 36.2 bits (82), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 56/276 (20%), Positives = 107/276 (38%), Gaps = 48/276 (17%)
Query: 228 VLQMLKAVLSELIPLIKYLNLKIFDPRISQFFSNLVKTNLSY-----REKNNIKRDDFLN 282
+ +L + E IP +KYL ++ P S F+ + Y ++ D ++
Sbjct: 163 IFMLLAGLPEEDIPHLKYLTDQMTRPDGSMTFAEAKEALYDYLIPIIEQRRQKPGTDAIS 222
Query: 283 IMMQLQIAQRGKTLSPDDVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQS 342
I+ Q+ R +T D + GG +T + L+F + LA++P+
Sbjct: 223 IVANGQVNGR---------PITSDEAKRMCGLLLVGGLDTVVNFLSFSMEFLAKSPE--- 270
Query: 343 KLRQEIMATKKKEGELTYEICHKMSYLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLT 402
RQE++ ++ + +E LR + SL RI Y+ +
Sbjct: 271 -HRQELIERPER--------------IPAACEELLRRF-SLVANGRILTSDYEF--HGVQ 312
Query: 403 LDVGTKISIPTFAIHYDPEYYPDPEKFDPERFSPENIE-SRPHYTYLPFGDGPRNCIGMR 461
L G +I +P D + E P +++ SR ++ FG G C+G
Sbjct: 313 LKKGDQILLPQMLSGLD----------ERENACPMHVDFSRQKVSHTTFGHGSHLCLGQH 362
Query: 462 FGTIQFKIGLAQLISNF-EFSIDSANATFEYLKGSI 496
+ + L + ++ +FSI + A ++ G +
Sbjct: 363 LARREIIVTLKEWLTRIPDFSI-APGAQIQHKSGIV 397
>pdb|1P2Y|A Chain A, Crystal Structure Of Cytochrome P450cam In Complex With
(S)- (-)-Nicotine
pdb|1P7R|A Chain A, Crystal Structure Of Reduced, Co-Exposed Complex Of
Cytochrome P450cam With (S)-(-)-Nicotine
Length = 420
Score = 36.2 bits (82), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 56/276 (20%), Positives = 107/276 (38%), Gaps = 48/276 (17%)
Query: 228 VLQMLKAVLSELIPLIKYLNLKIFDPRISQFFSNLVKTNLSY-----REKNNIKRDDFLN 282
+ +L + E IP +KYL ++ P S F+ + Y ++ D ++
Sbjct: 162 IFMLLAGLPEEDIPHLKYLTDQMTRPDGSMTFAEAKEALYDYLIPIIEQRRQKPGTDAIS 221
Query: 283 IMMQLQIAQRGKTLSPDDVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQS 342
I+ Q+ R +T D + GG +T + L+F + LA++P+
Sbjct: 222 IVANGQVNGR---------PITSDEAKRMCGLLLVGGLDTVVNFLSFSMEFLAKSPE--- 269
Query: 343 KLRQEIMATKKKEGELTYEICHKMSYLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLT 402
RQE++ ++ + +E LR + SL RI Y+ +
Sbjct: 270 -HRQELIERPER--------------IPAACEELLRRF-SLVADGRILTSDYEF--HGVQ 311
Query: 403 LDVGTKISIPTFAIHYDPEYYPDPEKFDPERFSPENIE-SRPHYTYLPFGDGPRNCIGMR 461
L G +I +P D + E P +++ SR ++ FG G C+G
Sbjct: 312 LKKGDQILLPQMLSGLD----------ERENACPMHVDFSRQKVSHTTFGHGSHLCLGQH 361
Query: 462 FGTIQFKIGLAQLISNF-EFSIDSANATFEYLKGSI 496
+ + L + ++ +FSI + A ++ G +
Sbjct: 362 LARREIIVTLKEWLTRIPDFSI-APGAQIQHKSGIV 396
>pdb|1RE9|A Chain A, Crystal Structure Of Cytochrome P450-cam With A
Fluorescent Probe D-8-ad (adamantane-1-carboxylic
Acid-5-dimethylamino-
Naphthalene-1-sulfonylamino-octyl-amide)
pdb|1YRC|A Chain A, X-ray Crystal Structure Of Hydrogenated Cytochrome P450cam
pdb|1YRD|A Chain A, X-Ray Crystal Structure Of Perdeuterated Cytochrome
P450cam
pdb|2H7Q|A Chain A, Cytochrome P450cam Complexed With Imidazole
pdb|1CP4|A Chain A, Formation, Crystal Structure, And Rearrangement Of A
Cytochrome P450-Cam Iron-Phenyl Complex
pdb|1NOO|A Chain A, Cytochrome P450-Cam Complexed With 5-Exo-Hydroxycamphor
pdb|1PHA|A Chain A, Inhibitor-Induced Conformational Change In Cytochrome
P450- Cam
pdb|1PHB|A Chain A, Inhibitor-Induced Conformational Change In Cytochrome
P450- Cam
pdb|1PHC|A Chain A, Crystal Structure Of Substrate-free Pseudomonas Putida
Cytochrome P450
pdb|1PHD|A Chain A, Crystal Structures Of Metyrapone-And
Phenylimidazole-Inhibited Complexes Of Cytochrome
P450-Cam
pdb|1PHE|A Chain A, Crystal Structures Of Metyrapone-And
Phenylimidazole-Inhibited Complexes Of Cytochrome
P450-Cam
pdb|1PHF|A Chain A, Crystal Structures Of Metyrapone-And Phenylimidazole-
Inhibited Complexes Of Cytochrome P450-Cam
pdb|1PHG|A Chain A, Crystal Structures Of Metyrapone-And Phenylimidazole-
Inhibited Complexes Of Cytochrome P450-Cam
pdb|2CPP|A Chain A, High-Resolution Crystal Structure Of Cytochrome P450-Cam
pdb|3CP4|A Chain A, Crystal Structure Of The Cytochrome P450-Cam Active Site
Mutant Thr252ala
pdb|3CPP|A Chain A, Crystal Structure Of The Carbon
Monoxy-Substrate-Cytochrome P450-Cam Ternary Complex
pdb|4CP4|A Chain A, Crystal Structure Of The Cytochrome P450-Cam Active Site
Mutant Thr252ala
pdb|4CPP|A Chain A, Crystal Structures Of Cytochrome P450-Cam Complexed With
Camphane, Thiocamphor, And Adamantane: Factors
Controlling P450 Substrate Hydroxylation
pdb|5CP4|A Chain A, Cryogenic Structure Of P450cam
pdb|5CPP|A Chain A, The Structural Basis For Substrate-Induced Changes In
Redox Potential And Spin Equilibrium In Cytochrome
P-450(Cam)
pdb|6CPP|A Chain A, Crystal Structures Of Cytochrome P450-Cam Complexed With
Camphane, Thiocamphor, And Adamantane: Factors
Controlling P450 Substrate Hydroxylation
pdb|7CPP|A Chain A, The Structural Basis For Substrate-Induced Changes In
Redox Potential And Spin Equilibrium In Cytochrome
P450(Cam)
pdb|8CPP|A Chain A, Crystal Structures Of Cytochrome P450-Cam Complexed With
Camphane, Thiocamphor, And Adamantane: Factors
Controlling P450 Substrate Hydroxylation
Length = 414
Score = 36.2 bits (82), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 56/276 (20%), Positives = 107/276 (38%), Gaps = 48/276 (17%)
Query: 228 VLQMLKAVLSELIPLIKYLNLKIFDPRISQFFSNLVKTNLSY-----REKNNIKRDDFLN 282
+ +L + E IP +KYL ++ P S F+ + Y ++ D ++
Sbjct: 162 IFMLLAGLPEEDIPHLKYLTDQMTRPDGSMTFAEAKEALYDYLIPIIEQRRQKPGTDAIS 221
Query: 283 IMMQLQIAQRGKTLSPDDVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQS 342
I+ Q+ R +T D + GG +T + L+F + LA++P+
Sbjct: 222 IVANGQVNGR---------PITSDEAKRMCGLLLVGGLDTVVNFLSFSMEFLAKSPE--- 269
Query: 343 KLRQEIMATKKKEGELTYEICHKMSYLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLT 402
RQE++ ++ + +E LR + SL RI Y+ +
Sbjct: 270 -HRQELIERPER--------------IPAACEELLRRF-SLVADGRILTSDYEF--HGVQ 311
Query: 403 LDVGTKISIPTFAIHYDPEYYPDPEKFDPERFSPENIE-SRPHYTYLPFGDGPRNCIGMR 461
L G +I +P D + E P +++ SR ++ FG G C+G
Sbjct: 312 LKKGDQILLPQMLSGLD----------ERENACPMHVDFSRQKVSHTTFGHGSHLCLGQH 361
Query: 462 FGTIQFKIGLAQLISNF-EFSIDSANATFEYLKGSI 496
+ + L + ++ +FSI + A ++ G +
Sbjct: 362 LARREIIVTLKEWLTRIPDFSI-APGAQIQHKSGIV 396
>pdb|2FE6|A Chain A, P450cam From Pseudomonas Putida Reconstituted With
Manganic Protoporphyrin Ix
Length = 421
Score = 36.2 bits (82), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 56/276 (20%), Positives = 107/276 (38%), Gaps = 48/276 (17%)
Query: 228 VLQMLKAVLSELIPLIKYLNLKIFDPRISQFFSNLVKTNLSY-----REKNNIKRDDFLN 282
+ +L + E IP +KYL ++ P S F+ + Y ++ D ++
Sbjct: 163 IFMLLAGLPEEDIPHLKYLTDQMTRPDGSMTFAEAKEALYDYLIPIIEQRRQKPGTDAIS 222
Query: 283 IMMQLQIAQRGKTLSPDDVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQS 342
I+ Q+ R +T D + GG +T + L+F + LA++P+
Sbjct: 223 IVANGQVNGR---------PITSDEAKRMCGLLLVGGLDTVVNFLSFSMEFLAKSPE--- 270
Query: 343 KLRQEIMATKKKEGELTYEICHKMSYLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLT 402
RQE++ ++ + +E LR + SL RI Y+ +
Sbjct: 271 -HRQELIERPER--------------IPAACEELLRRF-SLVADGRILTSDYEF--HGVQ 312
Query: 403 LDVGTKISIPTFAIHYDPEYYPDPEKFDPERFSPENIE-SRPHYTYLPFGDGPRNCIGMR 461
L G +I +P D + E P +++ SR ++ FG G C+G
Sbjct: 313 LKKGDQILLPQMLSGLD----------ERENACPMHVDFSRQKVSHTTFGHGSHLCLGQH 362
Query: 462 FGTIQFKIGLAQLISNF-EFSIDSANATFEYLKGSI 496
+ + L + ++ +FSI + A ++ G +
Sbjct: 363 LARREIIVTLKEWLTRIPDFSI-APGAQIQHKSGIV 397
>pdb|1GEK|A Chain A, Structural Characterization Of N-Butyl-Isocyanide
Complexes Of Cytochromes P450nor And P450cam
pdb|1GEM|A Chain A, Structural Characterization Of N-Butyl-Isocyanide
Complexes Of Cytochromes P450nor And P450cam
pdb|1IWI|A Chain A, Putidaredoxin-Binding Stablilizes An Active Conformer Of
Cytochrome P450cam In Its Reduced State; Crystal
Structure Of Cytochrome P450cam
pdb|2ZAW|A Chain A, Crystal Structure Of Ferric Cytochrome P450cam
Reconstituted With 6- Methyl-6-Depropionated Hemin
pdb|2ZAX|A Chain A, Crystal Structure Of Ferric Cytochrome P450cam
pdb|2Z97|A Chain A, Crystal Structure Of Ferric Cytochrome P450cam
Reconstituted With 7- Methyl-7-Depropionated Hemin
pdb|2ZWT|A Chain A, Crystal Structure Of Ferric Cytochrome P450cam
pdb|2ZWU|A Chain A, Crystal Structure Of Camphor Soaked Ferric Cytochrome
P450cam
pdb|2L8M|A Chain A, Reduced And Co-Bound Cytochrome P450cam (Cyp101a1)
Length = 415
Score = 36.2 bits (82), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 56/276 (20%), Positives = 107/276 (38%), Gaps = 48/276 (17%)
Query: 228 VLQMLKAVLSELIPLIKYLNLKIFDPRISQFFSNLVKTNLSY-----REKNNIKRDDFLN 282
+ +L + E IP +KYL ++ P S F+ + Y ++ D ++
Sbjct: 163 IFMLLAGLPEEDIPHLKYLTDQMTRPDGSMTFAEAKEALYDYLIPIIEQRRQKPGTDAIS 222
Query: 283 IMMQLQIAQRGKTLSPDDVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQS 342
I+ Q+ R +T D + GG +T + L+F + LA++P+
Sbjct: 223 IVANGQVNGR---------PITSDEAKRMCGLLLVGGLDTVVNFLSFSMEFLAKSPE--- 270
Query: 343 KLRQEIMATKKKEGELTYEICHKMSYLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLT 402
RQE++ ++ + +E LR + SL RI Y+ +
Sbjct: 271 -HRQELIERPER--------------IPAACEELLRRF-SLVADGRILTSDYEF--HGVQ 312
Query: 403 LDVGTKISIPTFAIHYDPEYYPDPEKFDPERFSPENIE-SRPHYTYLPFGDGPRNCIGMR 461
L G +I +P D + E P +++ SR ++ FG G C+G
Sbjct: 313 LKKGDQILLPQMLSGLD----------ERENACPMHVDFSRQKVSHTTFGHGSHLCLGQH 362
Query: 462 FGTIQFKIGLAQLISNF-EFSIDSANATFEYLKGSI 496
+ + L + ++ +FSI + A ++ G +
Sbjct: 363 LARREIIVTLKEWLTRIPDFSI-APGAQIQHKSGIV 397
>pdb|1C8J|A Chain A, Crystal Structure Of Cytochrome P450cam Mutant (F87wY96F)
pdb|1C8J|B Chain B, Crystal Structure Of Cytochrome P450cam Mutant (F87wY96F)
Length = 414
Score = 36.2 bits (82), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 56/276 (20%), Positives = 107/276 (38%), Gaps = 48/276 (17%)
Query: 228 VLQMLKAVLSELIPLIKYLNLKIFDPRISQFFSNLVKTNLSY-----REKNNIKRDDFLN 282
+ +L + E IP +KYL ++ P S F+ + Y ++ D ++
Sbjct: 162 IFMLLAGLPEEDIPHLKYLTDQMTRPDGSMTFAEAKEALYDYLIPIIEQRRQKPGTDAIS 221
Query: 283 IMMQLQIAQRGKTLSPDDVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQS 342
I+ Q+ R +T D + GG +T + L+F + LA++P+
Sbjct: 222 IVANGQVNGR---------PITSDEAKRMCGLLLVGGLDTVVNFLSFSMEFLAKSPE--- 269
Query: 343 KLRQEIMATKKKEGELTYEICHKMSYLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLT 402
RQE++ ++ + +E LR + SL RI Y+ +
Sbjct: 270 -HRQELIERPER--------------IPAACEELLRRF-SLVADGRILTSDYEF--HGVQ 311
Query: 403 LDVGTKISIPTFAIHYDPEYYPDPEKFDPERFSPENIE-SRPHYTYLPFGDGPRNCIGMR 461
L G +I +P D + E P +++ SR ++ FG G C+G
Sbjct: 312 LKKGDQILLPQMLSGLD----------ERENACPMHVDFSRQKVSHTTFGHGSHLCLGQH 361
Query: 462 FGTIQFKIGLAQLISNF-EFSIDSANATFEYLKGSI 496
+ + L + ++ +FSI + A ++ G +
Sbjct: 362 LARREIIVTLKEWLTRIPDFSI-APGAQIQHKSGIV 396
>pdb|1LWL|A Chain A, Crystal Structure Of Cytochrome P450-Cam With A
Fluorescent Probe D-8-Ad (Adamantane-1-Carboxylic
Acid-5-Dimethylamino-
Naphthalene-1-Sulfonylamino-Octyl-Amide)
pdb|1RF9|A Chain A, Crystal Structure Of Cytochrome P450-Cam With A
Fluorescent Probe D-4-Ad (Adamantane-1-Carboxylic
Acid-5-Dimethylamino-
Naphthalene-1-Sulfonylamino-Butyl-Amide)
Length = 417
Score = 35.8 bits (81), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 56/276 (20%), Positives = 107/276 (38%), Gaps = 48/276 (17%)
Query: 228 VLQMLKAVLSELIPLIKYLNLKIFDPRISQFFSNLVKTNLSY-----REKNNIKRDDFLN 282
+ +L + E IP +KYL ++ P S F+ + Y ++ D ++
Sbjct: 163 IFMLLAGLPEEDIPHLKYLTDQMTRPDGSMTFAEAKEALYDYLIPIIEQRRQKPGTDAIS 222
Query: 283 IMMQLQIAQRGKTLSPDDVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQS 342
I+ Q+ R +T D + GG +T + L+F + LA++P+
Sbjct: 223 IVANGQVNGR---------PITSDEAKRMCGLLLVGGLDTVVNFLSFSMEFLAKSPE--- 270
Query: 343 KLRQEIMATKKKEGELTYEICHKMSYLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLT 402
RQE++ ++ + +E LR + SL RI Y+ +
Sbjct: 271 -HRQELIERPER--------------IPAACEELLRRF-SLVADGRILTSDYEF--HGVQ 312
Query: 403 LDVGTKISIPTFAIHYDPEYYPDPEKFDPERFSPENIE-SRPHYTYLPFGDGPRNCIGMR 461
L G +I +P D + E P +++ SR ++ FG G C+G
Sbjct: 313 LKKGDQILLPQMLSGLD----------ERENACPMHVDFSRQKVSHTTFGHGSHLCLGQH 362
Query: 462 FGTIQFKIGLAQLISNF-EFSIDSANATFEYLKGSI 496
+ + L + ++ +FSI + A ++ G +
Sbjct: 363 LARREIIVTLKEWLTRIPDFSI-APGAQIQHKSGIV 397
>pdb|3B98|A Chain A, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1)
pdb|3B98|B Chain B, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1)
pdb|3B99|A Chain A, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1) In Complex With Substrate Analog
U51605
pdb|3B99|B Chain B, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1) In Complex With Substrate Analog
U51605
Length = 475
Score = 35.8 bits (81), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 78/201 (38%), Gaps = 19/201 (9%)
Query: 300 DVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELT 359
D EM + Q +V + V+ + L +P+ +R+EI K E
Sbjct: 250 DAEMQRRAMLLQLWVTQGNAGPAAFWVMGYLLT----HPEALRAVREEIQGGKHLRLE-- 303
Query: 360 YEICHKMSYLDKVTKEALRM-YPSLPQLDRISVKKYKLPN-TDLTLDVGTKISI-PTFAI 416
E D V E LR+ +L D KK L N + L G ++ + P +
Sbjct: 304 -ERQKNTPVFDSVLWETLRLTAAALITRDVTQDKKICLSNGQEYHLRRGDRLCVFPFISP 362
Query: 417 HYDPEYYPDPEKFDPERF-SPENIE--------SRPHYTYLPFGDGPRNCIGMRFGTIQF 467
DP+ + PE F +RF + + E +R Y +P+G C G F
Sbjct: 363 QMDPQIHQQPEMFQFDRFLNADRTEKKDFFKNGARVKYPSVPWGTEDNLCPGRHFAVHAI 422
Query: 468 KIGLAQLISNFEFSIDSANAT 488
K + +++ F+ + NAT
Sbjct: 423 KELVFTILTRFDVELCDKNAT 443
>pdb|1PKF|A Chain A, Crystal Structure Of Epothilone D-Bound Cytochrome
P450epok
Length = 419
Score = 35.8 bits (81), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 70/352 (19%), Positives = 132/352 (37%), Gaps = 62/352 (17%)
Query: 129 LFGSKGEYWKRLRNKLSPTFTSGKIKYMFPLIKKCSDQLITTIRKQIGESKQMSLEV-KD 187
LFG E R+R ++P+FTS I + I++ DQL+ S Q +V +D
Sbjct: 95 LFGLPPEDHARVRKLVNPSFTSRAIDLLRAEIQRTVDQLLD------ARSGQEEFDVVRD 148
Query: 188 YCARYTTDVIGSTAFGIEINSLENPDSEFRQVSLLVMKPSVLQMLKAVLSELIPLIKYLN 247
Y + I A + D +FR+ + + ++ V E L+ +
Sbjct: 149 YA-----EGIPMRAISALLKVPAECDEKFRRFGSATARALGVGLVPRVDEETKTLVASVT 203
Query: 248 LKIFDPRISQFFSNLVKTNLSYREKNNIKRDDFLNIMMQLQIAQRGKTLSPDD-VEMTDD 306
+ L+ L R +N ++ D + M LQ G LS + V +
Sbjct: 204 EGL----------ALLHGVLDERRRNPLEND---VLTMLLQAEADGSRLSTKELVALVGA 250
Query: 307 VITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKM 366
+I A G +T+ ++ F + L R+P E + K E L
Sbjct: 251 IIAA--------GTDTTIYLIAFAVLNLLRSP--------EALELVKAEPGLMR------ 288
Query: 367 SYLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPEYYPDP 426
+ LD+V + + ++ ++ + + L ++ G + + + D + P
Sbjct: 289 NALDEVLR-----FENILRIGTVRFARQDLEYCGASIKKGEMVFLLIPSALRDGTVFSRP 343
Query: 427 EKFDPERFSPENIESRPHYTYLPFGDGPRNCIGMRFGTIQFKIGLAQLISNF 478
+ FD R + + L +G GP C G+ ++ +I + + F
Sbjct: 344 DVFDVRRDTSAS---------LAYGRGPHVCPGVSLARLEAEIAVGTIFRRF 386
>pdb|3BDZ|A Chain A, The Role Of Asn 242 In P450cin
pdb|3BDZ|B Chain B, The Role Of Asn 242 In P450cin
pdb|3BE0|A Chain A, The Role Of Asn 242 In P450cin
pdb|3BE0|B Chain B, The Role Of Asn 242 In P450cin
Length = 397
Score = 35.8 bits (81), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 54/248 (21%), Positives = 106/248 (42%), Gaps = 52/248 (20%)
Query: 256 SQFFSNLV---KTNLSYREKNNIKRDDFLNIMMQLQIAQRGKTLSPDDVEMTDDVITAQS 312
++ F+ LV +T ++ R N +D ++ ++ +I G++LS DD +
Sbjct: 177 AEIFAELVAHARTLIAERRTN--PGNDIMSRVIMSKI--DGESLSEDD-------LIGFF 225
Query: 313 FVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSYLDKV 372
+ GG + ++ L+ + LA + +++ +L I H +
Sbjct: 226 TILLLGGIDATARFLSSVFWRLAWDIELRRRL-----------------IAHP-ELIPNA 267
Query: 373 TKEALRMY-PSLPQLDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPEYYPDPEKFDP 431
E LR Y P++ + R+ ++ + D+T+ G A+ + P D FD
Sbjct: 268 VDELLRFYGPAM--VGRLVTQEVTV--GDITMKPGQT------AMLWFPIASRDRSAFD- 316
Query: 432 ERFSPENI--ESRPHYTYLPFGDGPRNCIGMRFGTIQFKIGLAQLISNF-EFSIDSANAT 488
SP+NI E P+ +L G G C+G ++ ++ + + + EFS+D N
Sbjct: 317 ---SPDNIVIERTPNR-HLSLGHGIHRCLGAHLIRVEARVAITEFLKRIPEFSLDP-NKE 371
Query: 489 FEYLKGSI 496
E+L G +
Sbjct: 372 CEWLMGQV 379
>pdb|4AW3|A Chain A, Structure Of The Mixed-Function P450 Mycg F286v Mutant In
Complex With Mycinamicin V In P1 Space Group
pdb|4AW3|B Chain B, Structure Of The Mixed-Function P450 Mycg F286v Mutant In
Complex With Mycinamicin V In P1 Space Group
Length = 417
Score = 35.8 bits (81), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 42/206 (20%), Positives = 86/206 (41%), Gaps = 46/206 (22%)
Query: 278 DDFLNIMMQLQIAQRGKTLSPDDVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARN 337
DD ++ ++Q + Q +LS + E+ D I GYE++++ + +Y L
Sbjct: 223 DDLVSALVQARDQQ--DSLS--EQELLDLAIG-----LLVAGYESTTTQIADFVYLLMTR 273
Query: 338 PDIQSKL--RQEIMATKKKEGELTYEICHKMSYLDKVTKEALRMYPSLPQLDRISVKKYK 395
P+++ +L R E++ + +E LT + + +V +Y
Sbjct: 274 PELRRQLLDRPELIPSAVEE--LTRWVPLGVG---------------------TAVPRYA 310
Query: 396 LPNTDL---TLDVGTKISIPTFAIHYDPEYYPDPEKFDPERFSPENIESRPHYTYLPFGD 452
+ + L T+ G + T A + D +PD ++ D +R +P +L FG
Sbjct: 311 VEDVTLRGVTIRAGEPVLASTGAANRDQAQFPDADRIDVDR-TPNQ--------HLGFGH 361
Query: 453 GPRNCIGMRFGTIQFKIGLAQLISNF 478
G +C+G ++ ++ L L+
Sbjct: 362 GVHHCLGAPLARVELQVALEVLLQRL 387
>pdb|2A1N|A Chain A, Crystal Structure Of Ferrous Dioxygen Complex Of D251n
Cytochrome P450cam
pdb|2A1N|B Chain B, Crystal Structure Of Ferrous Dioxygen Complex Of D251n
Cytochrome P450cam
Length = 415
Score = 35.8 bits (81), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 56/276 (20%), Positives = 107/276 (38%), Gaps = 48/276 (17%)
Query: 228 VLQMLKAVLSELIPLIKYLNLKIFDPRISQFFSNLVKTNLSY-----REKNNIKRDDFLN 282
+ +L + E IP +KYL ++ P S F+ + Y ++ D ++
Sbjct: 163 IFMLLAGLPEEDIPHLKYLTDQMTRPDGSMTFAEAKEALYDYLIPIIEQRRQKPGTDAIS 222
Query: 283 IMMQLQIAQRGKTLSPDDVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQS 342
I+ Q+ R +T D + GG T + L+F + LA++P+
Sbjct: 223 IVANGQVNGR---------PITSDEAKRMCGLLLVGGLNTVVNFLSFSMEFLAKSPE--- 270
Query: 343 KLRQEIMATKKKEGELTYEICHKMSYLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLT 402
RQE++ ++ + +E LR + SL RI Y+ +
Sbjct: 271 -HRQELIERPER--------------IPAACEELLRRF-SLVADGRILTSDYEF--HGVQ 312
Query: 403 LDVGTKISIPTFAIHYDPEYYPDPEKFDPERFSPENIE-SRPHYTYLPFGDGPRNCIGMR 461
L G +I +P D + E +P +++ SR ++ FG G C+G
Sbjct: 313 LKKGDQILLPQMLSGLD----------ERENAAPMHVDFSRQKVSHTTFGHGSHLCLGQH 362
Query: 462 FGTIQFKIGLAQLISNF-EFSIDSANATFEYLKGSI 496
+ + L + ++ +FSI + A ++ G +
Sbjct: 363 LARREIIVTLKEWLTRIPDFSI-APGAQIQHKSGIV 397
>pdb|1Q5D|A Chain A, Epothilone B-Bound Cytochrome P450epok
pdb|1Q5E|A Chain A, Substrate-Free Cytochrome P450epok
Length = 419
Score = 35.8 bits (81), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 70/352 (19%), Positives = 132/352 (37%), Gaps = 62/352 (17%)
Query: 129 LFGSKGEYWKRLRNKLSPTFTSGKIKYMFPLIKKCSDQLITTIRKQIGESKQMSLEV-KD 187
LFG E R+R ++P+FTS I + I++ DQL+ S Q +V +D
Sbjct: 95 LFGLPPEDHARVRKLVNPSFTSRAIDLLRAEIQRTVDQLLD------ARSGQEEFDVVRD 148
Query: 188 YCARYTTDVIGSTAFGIEINSLENPDSEFRQVSLLVMKPSVLQMLKAVLSELIPLIKYLN 247
Y + I A + D +FR+ + + ++ V E L+ +
Sbjct: 149 YA-----EGIPMRAISALLKVPAECDEKFRRFGSATARALGVGLVPRVDEETKTLVASVT 203
Query: 248 LKIFDPRISQFFSNLVKTNLSYREKNNIKRDDFLNIMMQLQIAQRGKTLSPDD-VEMTDD 306
+ L+ L R +N ++ D + M LQ G LS + V +
Sbjct: 204 EGL----------ALLHGVLDERRRNPLEND---VLTMLLQAEADGSRLSTKELVALVGA 250
Query: 307 VITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKM 366
+I A G +T+ ++ F + L R+P E + K E L
Sbjct: 251 IIAA--------GTDTTIYLIAFAVLNLLRSP--------EALELVKAEPGLMR------ 288
Query: 367 SYLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPEYYPDP 426
+ LD+V + + ++ ++ + + L ++ G + + + D + P
Sbjct: 289 NALDEVLR-----FDNILRIGTVRFARQDLEYCGASIKKGEMVFLLIPSALRDGTVFSRP 343
Query: 427 EKFDPERFSPENIESRPHYTYLPFGDGPRNCIGMRFGTIQFKIGLAQLISNF 478
+ FD R + + L +G GP C G+ ++ +I + + F
Sbjct: 344 DVFDVRRDTSAS---------LAYGRGPHVCPGVSLARLEAEIAVGTIFRRF 386
>pdb|4FB2|A Chain A, Crystal Structure Of Substrate-Free P450cin
pdb|4FB2|B Chain B, Crystal Structure Of Substrate-Free P450cin
pdb|4FB2|C Chain C, Crystal Structure Of Substrate-Free P450cin
pdb|4FB2|D Chain D, Crystal Structure Of Substrate-Free P450cin
pdb|4FYZ|A Chain A, Crystal Structure Of Nitrosyl Cytochrome P450cin
pdb|4FYZ|B Chain B, Crystal Structure Of Nitrosyl Cytochrome P450cin
pdb|4FMX|A Chain A, Crystal Structure Of Substrate-Bound P450cin
pdb|4FMX|B Chain B, Crystal Structure Of Substrate-Bound P450cin
Length = 398
Score = 35.8 bits (81), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 54/248 (21%), Positives = 106/248 (42%), Gaps = 52/248 (20%)
Query: 256 SQFFSNLV---KTNLSYREKNNIKRDDFLNIMMQLQIAQRGKTLSPDDVEMTDDVITAQS 312
++ F+ LV +T ++ R N +D ++ ++ +I G++LS DD +
Sbjct: 178 AEIFAELVAHARTLIAERRTN--PGNDIMSRVIMSKI--DGESLSEDD-------LIGFF 226
Query: 313 FVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSYLDKV 372
+ GG + ++ L+ + LA + +++ +L I H +
Sbjct: 227 TILLLGGIDNTARFLSSVFWRLAWDIELRRRL-----------------IAHP-ELIPNA 268
Query: 373 TKEALRMY-PSLPQLDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPEYYPDPEKFDP 431
E LR Y P++ + R+ ++ + D+T+ G A+ + P D FD
Sbjct: 269 VDELLRFYGPAM--VGRLVTQEVTV--GDITMKPGQT------AMLWFPIASRDRSAFD- 317
Query: 432 ERFSPENI--ESRPHYTYLPFGDGPRNCIGMRFGTIQFKIGLAQLISNF-EFSIDSANAT 488
SP+NI E P+ +L G G C+G ++ ++ + + + EFS+D N
Sbjct: 318 ---SPDNIVIERTPNR-HLSLGHGIHRCLGAHLIRVEARVAITEFLKRIPEFSLDP-NKE 372
Query: 489 FEYLKGSI 496
E+L G +
Sbjct: 373 CEWLMGQV 380
>pdb|1T2B|A Chain A, Crystal Structure Of Cytochrome P450cin Complexed With Its
Substrate 1,8-Cineole
pdb|1T2B|B Chain B, Crystal Structure Of Cytochrome P450cin Complexed With Its
Substrate 1,8-Cineole
Length = 397
Score = 35.8 bits (81), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 54/248 (21%), Positives = 106/248 (42%), Gaps = 52/248 (20%)
Query: 256 SQFFSNLV---KTNLSYREKNNIKRDDFLNIMMQLQIAQRGKTLSPDDVEMTDDVITAQS 312
++ F+ LV +T ++ R N +D ++ ++ +I G++LS DD +
Sbjct: 177 AEIFAELVAHARTLIAERRTN--PGNDIMSRVIMSKI--DGESLSEDD-------LIGFF 225
Query: 313 FVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSYLDKV 372
+ GG + ++ L+ + LA + +++ +L I H +
Sbjct: 226 TILLLGGIDNTARFLSSVFWRLAWDIELRRRL-----------------IAHP-ELIPNA 267
Query: 373 TKEALRMY-PSLPQLDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPEYYPDPEKFDP 431
E LR Y P++ + R+ ++ + D+T+ G A+ + P D FD
Sbjct: 268 VDELLRFYGPAM--VGRLVTQEVTV--GDITMKPGQT------AMLWFPIASRDRSAFD- 316
Query: 432 ERFSPENI--ESRPHYTYLPFGDGPRNCIGMRFGTIQFKIGLAQLISNF-EFSIDSANAT 488
SP+NI E P+ +L G G C+G ++ ++ + + + EFS+D N
Sbjct: 317 ---SPDNIVIERTPNR-HLSLGHGIHRCLGAHLIRVEARVAITEFLKRIPEFSLDP-NKE 371
Query: 489 FEYLKGSI 496
E+L G +
Sbjct: 372 CEWLMGQV 379
>pdb|3TYW|A Chain A, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|3TYW|B Chain B, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|3TYW|C Chain C, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|3TYW|D Chain D, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|4FXB|A Chain A, Crystal Structure Of Cyp105n1 From Streptomyces
Coelicolor: A Cytochrome P450 Oxidase In The Coelibactin
Siderophore Biosynthetic Pathway
pdb|4FXB|B Chain B, Crystal Structure Of Cyp105n1 From Streptomyces
Coelicolor: A Cytochrome P450 Oxidase In The Coelibactin
Siderophore Biosynthetic Pathway
Length = 417
Score = 35.4 bits (80), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 71/341 (20%), Positives = 130/341 (38%), Gaps = 75/341 (21%)
Query: 139 RLRNKLSPTFTSGKIKYMFPLIKKCSDQLITTIRKQIGESKQMSLEVKDYCARYTTDVIG 198
R R L P FT +++ M P ++ D+++ + G +S Y +T VI
Sbjct: 109 RYRRMLLPAFTVRRVRAMRPAVQARVDEILDGMLAAGGPVDLVSA----YANAVSTSVI- 163
Query: 199 STAFGIEINSLENPDSEFRQVSLLV--MKPSVLQMLKAVLSELIPLIKYLNLKIFDPRIS 256
GI + LE FR V+ + + Q+ +A+ L + + +PR
Sbjct: 164 CELLGIPRHDLEF----FRDVTRISGSRNSTAEQVSEALGGLFGLLGGLVAERREEPR-D 218
Query: 257 QFFSNLVKTNLSYREKNNIKRDDFLNIMMQLQIAQRGKTLSPDDVEMTDDVITAQSFVFF 316
S LV +L N+ + L+ + G T++
Sbjct: 219 DLISKLVTDHLV---PGNVTTEQLLSTL--------GITIN------------------- 248
Query: 317 FGGYETSSSVLTFCLYELARNPDIQSKLRQE--IMATKKKEGELTYEICHKMSYLDKVTK 374
G ET++S++ L P++ ++LR++ +M E+ +S D
Sbjct: 249 -AGRETTTSMIALSTLLLLDRPELPAELRKDPDLMPAA------VDELLRVLSVAD---- 297
Query: 375 EALRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPEYYPDPEKFDPERF 434
S+P R++ + +L + D G I++ A H DPE + DPE+ D R
Sbjct: 298 -------SIPL--RVAAEDIELSGRTVPADDGV-IALLAGANH-DPEQFDDPERVDFHRT 346
Query: 435 SPENIESRPHYTYLPFGDGPRNCIGMRFGTIQFKIGLAQLI 475
++ FG G C+G ++ ++ L L+
Sbjct: 347 DNHHVA---------FGYGVHQCVGQHLARLELEVALETLL 378
>pdb|4EK1|A Chain A, Crystal Structure Of Electron-Spin Labeled Cytochrome
P450cam
pdb|4EK1|B Chain B, Crystal Structure Of Electron-Spin Labeled Cytochrome
P450cam
Length = 414
Score = 35.4 bits (80), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 55/276 (19%), Positives = 108/276 (39%), Gaps = 48/276 (17%)
Query: 228 VLQMLKAVLSELIPLIKYLNLKIFDPRISQFFSNLVKTNLSY-----REKNNIKRDDFLN 282
+ +L + E IP +KYL ++ P F+ + Y ++ D ++
Sbjct: 162 IFMLLAGLPEEDIPHLKYLTDQMTRPDGCMTFAEAKEALYDYLIPIIEQRRQKPGTDAIS 221
Query: 283 IMMQLQIAQRGKTLSPDDVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQS 342
I+ Q+ R +T D + GG +T + L+F + LA++P+
Sbjct: 222 IVANGQVNGR---------PITSDEAKRMCGLLLVGGLDTVVNFLSFSMEFLAKSPE--- 269
Query: 343 KLRQEIMATKKKEGELTYEICHKMSYLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLT 402
RQE++ ++ + ++E LR + SL RI Y+ +
Sbjct: 270 -HRQELIERPER--------------IPAASEELLRRF-SLVADGRILTSDYEF--HGVQ 311
Query: 403 LDVGTKISIPTFAIHYDPEYYPDPEKFDPERFSPENIE-SRPHYTYLPFGDGPRNCIGMR 461
L G +I +P D + E +P +++ SR ++ FG G C+G
Sbjct: 312 LKKGDQILLPQMLSGLD----------ERENAAPMHVDFSRQKVSHTTFGHGSHLCLGQH 361
Query: 462 FGTIQFKIGLAQLISNF-EFSIDSANATFEYLKGSI 496
+ + L + ++ +FSI + A ++ G +
Sbjct: 362 LARREIIVTLKEWLTRIPDFSI-APGAQIQHKSGIV 396
>pdb|3AWP|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) Mutant F288g
Length = 415
Score = 35.4 bits (80), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 23/136 (16%), Positives = 57/136 (41%), Gaps = 9/136 (6%)
Query: 362 ICHKMSYLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPE 421
+ + Y + +E R YP P + + + ++ + G ++ + + ++D
Sbjct: 267 LVQQPDYAELFVQEVRRFYPFGPAVVARASQDFEWEG--MAFPEGRQVVLDLYGSNHDAA 324
Query: 422 YYPDPEKFDPERFSPENIESRPHYTYLPFGDG----PRNCIGMRFGTIQFKIGLAQLISN 477
+ DP++F PERF + +S + ++P G G C G K+ L++
Sbjct: 325 TWADPQEFRPERFRAWDEDS---FNFIPQGGGDHYLGHRCPGEWIVLAIMKVAAHLLVNA 381
Query: 478 FEFSIDSANATFEYLK 493
+ + + + ++ +
Sbjct: 382 MRYDVPDQDLSIDFAR 397
>pdb|6CP4|A Chain A, P450cam D251n Mutant
Length = 414
Score = 35.4 bits (80), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 56/276 (20%), Positives = 106/276 (38%), Gaps = 48/276 (17%)
Query: 228 VLQMLKAVLSELIPLIKYLNLKIFDPRISQFFSNLVKTNLSY-----REKNNIKRDDFLN 282
+ +L + E IP +KYL ++ P S F+ + Y ++ D ++
Sbjct: 162 IFMLLAGLPEEDIPHLKYLTDQMTRPDGSMTFAEAKEALYDYLIPIIEQRRQKPGTDAIS 221
Query: 283 IMMQLQIAQRGKTLSPDDVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQS 342
I+ Q+ R +T D + GG T + L+F + LA++P+
Sbjct: 222 IVANGQVNGR---------PITSDEAKRMCGLLLVGGLNTVVNFLSFSMEFLAKSPE--- 269
Query: 343 KLRQEIMATKKKEGELTYEICHKMSYLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLT 402
RQE++ ++ + +E LR + SL RI Y+ +
Sbjct: 270 -HRQELIERPER--------------IPAACEELLRRF-SLVADGRILTSDYEF--HGVQ 311
Query: 403 LDVGTKISIPTFAIHYDPEYYPDPEKFDPERFSPENIE-SRPHYTYLPFGDGPRNCIGMR 461
L G +I +P D + E P +++ SR ++ FG G C+G
Sbjct: 312 LKKGDQILLPQMLSGLD----------ERENACPMHVDFSRQKVSHTTFGHGSHLCLGQH 361
Query: 462 FGTIQFKIGLAQLISNF-EFSIDSANATFEYLKGSI 496
+ + L + ++ +FSI + A ++ G +
Sbjct: 362 LARREIIVTLKEWLTRIPDFSI-APGAQIQHKSGIV 396
>pdb|2Y46|A Chain A, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin Iv In C 2 2 21 Space Group
pdb|2Y46|B Chain B, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin Iv In C 2 2 21 Space Group
pdb|2Y46|C Chain C, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin Iv In C 2 2 21 Space Group
pdb|2Y5N|A Chain A, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin V In P21 Space Group
pdb|2Y5N|B Chain B, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin V In P21 Space Group
pdb|2Y5Z|A Chain A, Mixed-Function P450 Mycg In Complex With Mycinamicin Iii
In C2221 Space Group
pdb|2Y5Z|B Chain B, Mixed-Function P450 Mycg In Complex With Mycinamicin Iii
In C2221 Space Group
pdb|2Y5Z|C Chain C, Mixed-Function P450 Mycg In Complex With Mycinamicin Iii
In C2221 Space Group
pdb|2Y98|A Chain A, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin Iv In P21212 Space Group
pdb|2YGX|A Chain A, Structure Of The Mixed-Function P450 Mycg In P21 Space
Group
pdb|2YGX|B Chain B, Structure Of The Mixed-Function P450 Mycg In P21 Space
Group
pdb|2YGX|C Chain C, Structure Of The Mixed-Function P450 Mycg In P21 Space
Group
pdb|2YGX|D Chain D, Structure Of The Mixed-Function P450 Mycg In P21 Space
Group
pdb|2YCA|A Chain A, Mixed-Function P450 Mycg In Complex With Mycinamicin Iii
In P21212 Space Group
Length = 417
Score = 35.0 bits (79), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 44/203 (21%), Positives = 88/203 (43%), Gaps = 40/203 (19%)
Query: 278 DDFLNIMMQLQIAQRGKTLSPDDVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARN 337
DD ++ ++Q + Q +LS + E+ D I GYE++++ + +Y L
Sbjct: 223 DDLVSALVQARDQQ--DSLS--EQELLDLAIG-----LLVAGYESTTTQIADFVYLLMTR 273
Query: 338 PDIQSKL--RQEIMATKKKEGELTYEICHKMSYLDKVTKEALRMYPSLPQLDRISVKKYK 395
P+++ +L R E++ + +E LT + L + + P R +V+
Sbjct: 274 PELRRQLLDRPELIPSAVEE--LTRWV-------------PLGVGTAFP---RYAVEDVT 315
Query: 396 LPNTDLTLDVGTKISIPTFAIHYDPEYYPDPEKFDPERFSPENIESRPHYTYLPFGDGPR 455
L +T+ G + T A + D +PD ++ D +R +P +L FG G
Sbjct: 316 L--RGVTIRAGEPVLASTGAANRDQAQFPDADRIDVDR-TPNQ--------HLGFGHGVH 364
Query: 456 NCIGMRFGTIQFKIGLAQLISNF 478
+C+G ++ ++ L L+
Sbjct: 365 HCLGAPLARVELQVALEVLLQRL 387
>pdb|2YOO|A Chain A, Cholest-4-en-3-one Bound Structure Of Cyp142 From
Mycobacterium Smegmatis
pdb|2YOO|B Chain B, Cholest-4-en-3-one Bound Structure Of Cyp142 From
Mycobacterium Smegmatis
pdb|2YOO|C Chain C, Cholest-4-en-3-one Bound Structure Of Cyp142 From
Mycobacterium Smegmatis
pdb|2YOO|D Chain D, Cholest-4-en-3-one Bound Structure Of Cyp142 From
Mycobacterium Smegmatis
pdb|3ZBY|A Chain A, Ligand-free Structure Of Cyp142 From Mycobacterium
Smegmatis
pdb|3ZBY|B Chain B, Ligand-free Structure Of Cyp142 From Mycobacterium
Smegmatis
pdb|3ZBY|C Chain C, Ligand-free Structure Of Cyp142 From Mycobacterium
Smegmatis
pdb|3ZBY|D Chain D, Ligand-free Structure Of Cyp142 From Mycobacterium
Smegmatis
pdb|3ZBY|E Chain E, Ligand-free Structure Of Cyp142 From Mycobacterium
Smegmatis
pdb|3ZBY|F Chain F, Ligand-free Structure Of Cyp142 From Mycobacterium
Smegmatis
Length = 407
Score = 35.0 bits (79), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 34/167 (20%), Positives = 65/167 (38%), Gaps = 29/167 (17%)
Query: 303 MTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEI 362
M+DD I ++ + GG ET+ L+ +L R+ D L ++
Sbjct: 218 MSDDEIVFETLLILIGGDETTRHTLSGGTEQLLRHRDQWDALVADV-------------- 263
Query: 363 CHKMSYLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPEY 422
L +E LR + + R T+L G KI + + ++D
Sbjct: 264 ----DLLPGAIEEMLRWTSPVKNMCRTLTADTVFHGTELR--AGEKIMLMFESANFDESV 317
Query: 423 YPDPEKFDPERFSPENIESRPHYTYLPFGDGPRNCIGMRFGTIQFKI 469
+ DP+ F I+ P+ +++ FG G C+G + ++ ++
Sbjct: 318 FGDPDNF--------RIDRNPN-SHVAFGFGTHFCLGNQLARLELRL 355
>pdb|1T85|A Chain A, Crystal Structure Of The Ferrous Co-Bound Cytochrome
P450cam Mutant (L358pC334A)
pdb|1T86|A Chain A, Crystal Structure Of The Ferrous Cytochrome P450cam Mutant
(L358pC334A)
pdb|1T86|B Chain B, Crystal Structure Of The Ferrous Cytochrome P450cam Mutant
(L358pC334A)
Length = 414
Score = 35.0 bits (79), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 56/276 (20%), Positives = 107/276 (38%), Gaps = 48/276 (17%)
Query: 228 VLQMLKAVLSELIPLIKYLNLKIFDPRISQFFSNLVKTNLSY-----REKNNIKRDDFLN 282
+ +L + E IP +KYL ++ P S F+ + Y ++ D ++
Sbjct: 162 IFMLLAGLPEEDIPHLKYLTDQMTRPDGSMTFAEAKEALYDYLIPIIEQRRQKPGTDAIS 221
Query: 283 IMMQLQIAQRGKTLSPDDVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQS 342
I+ Q+ R +T D + GG +T + L+F + LA++P+
Sbjct: 222 IVANGQVNGR---------PITSDEAKRMCGLLLVGGLDTVVNFLSFSMEFLAKSPE--- 269
Query: 343 KLRQEIMATKKKEGELTYEICHKMSYLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLT 402
RQE++ ++ + +E LR + SL RI Y+ +
Sbjct: 270 -HRQELIERPER--------------IPAACEELLRRF-SLVADGRILTSDYEF--HGVQ 311
Query: 403 LDVGTKISIPTFAIHYDPEYYPDPEKFDPERFSPENIE-SRPHYTYLPFGDGPRNCIGMR 461
L G +I +P D + E +P +++ SR ++ FG G C G
Sbjct: 312 LKKGDQILLPQMLSGLD----------ERENAAPMHVDFSRQKVSHTTFGHGSHLCPGQH 361
Query: 462 FGTIQFKIGLAQLISNF-EFSIDSANATFEYLKGSI 496
+ + L + ++ +FSI + A ++ G +
Sbjct: 362 LARREIIVTLKEWLTRIPDFSI-APGAQIQHKSGIV 396
>pdb|3NC3|A Chain A, Cyp134a1 Structure With A Closed Substrate Binding Loop
pdb|3NC3|B Chain B, Cyp134a1 Structure With A Closed Substrate Binding Loop
pdb|3NC5|A Chain A, Cyp134a1 Structure With An Open Substrate Binding Loop
pdb|3NC5|B Chain B, Cyp134a1 Structure With An Open Substrate Binding Loop
pdb|3NC6|A Chain A, Cyp134a1 1-Phenylimidazole Bound Structure
pdb|3NC6|B Chain B, Cyp134a1 1-Phenylimidazole Bound Structure
pdb|3NC7|A Chain A, Cyp134a1 2-Phenylimidazole Bound Structure
pdb|3NC7|B Chain B, Cyp134a1 2-Phenylimidazole Bound Structure
Length = 441
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 35/175 (20%), Positives = 65/175 (37%), Gaps = 27/175 (15%)
Query: 299 DDVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGEL 358
+ + ++D I A E + L +Y L NP E
Sbjct: 250 EGMALSDKDILALILNVLLAATEPADKTLALMIYHLLNNP------------------EQ 291
Query: 359 TYEICHKMSYLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKISIPTFAIHY 418
++ S + + E LR P + + R + + ++ D T + A +
Sbjct: 292 MNDVLADRSLVPRAIAETLRYKPPVQLIPRQLSQDTVVGGMEIKKD--TIVFCMIGAANR 349
Query: 419 DPEYYPDPEKFDPERFSPENIESRPHYT----YLPFGDGPRNCIGMRFGTIQFKI 469
DPE + P+ F+ R E++ + ++ +L FG G NC+G F + +I
Sbjct: 350 DPEAFEQPDVFNIHR---EDLGIKSAFSGAARHLAFGSGIHNCVGTAFAKNEIEI 401
>pdb|3ZSN|A Chain A, Structure Of The Mixed-Function P450 Mycg F286a Mutant In
Complex With Mycinamicin Iv
pdb|3ZSN|B Chain B, Structure Of The Mixed-Function P450 Mycg F286a Mutant In
Complex With Mycinamicin Iv
pdb|3ZSN|C Chain C, Structure Of The Mixed-Function P450 Mycg F286a Mutant In
Complex With Mycinamicin Iv
Length = 417
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 44/203 (21%), Positives = 88/203 (43%), Gaps = 40/203 (19%)
Query: 278 DDFLNIMMQLQIAQRGKTLSPDDVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARN 337
DD ++ ++Q + Q +LS + E+ D I GYE++++ + +Y L
Sbjct: 223 DDLVSALVQARDQQ--DSLS--EQELLDLAIG-----LLVAGYESTTTQIADFVYLLMTR 273
Query: 338 PDIQSKL--RQEIMATKKKEGELTYEICHKMSYLDKVTKEALRMYPSLPQLDRISVKKYK 395
P+++ +L R E++ + +E LT + L + + P R +V+
Sbjct: 274 PELRRQLLDRPELIPSAVEE--LTRWV-------------PLGVGTAAP---RYAVEDVT 315
Query: 396 LPNTDLTLDVGTKISIPTFAIHYDPEYYPDPEKFDPERFSPENIESRPHYTYLPFGDGPR 455
L +T+ G + T A + D +PD ++ D +R +P +L FG G
Sbjct: 316 L--RGVTIRAGEPVLASTGAANRDQAQFPDADRIDVDR-TPNQ--------HLGFGHGVH 364
Query: 456 NCIGMRFGTIQFKIGLAQLISNF 478
+C+G ++ ++ L L+
Sbjct: 365 HCLGAPLARVELQVALEVLLQRL 387
>pdb|2A1O|A Chain A, Crystal Structure Of Ferrous Dioxygen Complex Of T252a
Cytochrome P450cam
pdb|2A1O|B Chain B, Crystal Structure Of Ferrous Dioxygen Complex Of T252a
Cytochrome P450cam
Length = 415
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 55/276 (19%), Positives = 107/276 (38%), Gaps = 48/276 (17%)
Query: 228 VLQMLKAVLSELIPLIKYLNLKIFDPRISQFFSNLVKTNLSY-----REKNNIKRDDFLN 282
+ +L + E IP +KYL ++ P S F+ + Y ++ D ++
Sbjct: 163 IFMLLAGLPEEDIPHLKYLTDQMTRPDGSMTFAEAKEALYDYLIPIIEQRRQKPGTDAIS 222
Query: 283 IMMQLQIAQRGKTLSPDDVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQS 342
I+ Q+ R +T D + GG + + L+F + LA++P+
Sbjct: 223 IVANGQVNGR---------PITSDEAKRMCGLLLVGGLDAVVNFLSFSMEFLAKSPE--- 270
Query: 343 KLRQEIMATKKKEGELTYEICHKMSYLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLT 402
RQE++ ++ + +E LR + SL RI Y+ +
Sbjct: 271 -HRQELIERPER--------------IPAACEELLRRF-SLVADGRILTSDYEF--HGVQ 312
Query: 403 LDVGTKISIPTFAIHYDPEYYPDPEKFDPERFSPENIE-SRPHYTYLPFGDGPRNCIGMR 461
L G +I +P D + E +P +++ SR ++ FG G C+G
Sbjct: 313 LKKGDQILLPQMLSGLD----------ERENAAPMHVDFSRQKVSHTTFGHGSHLCLGQH 362
Query: 462 FGTIQFKIGLAQLISNF-EFSIDSANATFEYLKGSI 496
+ + L + ++ +FSI + A ++ G +
Sbjct: 363 LARREIIVTLKEWLTRIPDFSI-APGAQIQHKSGIV 397
>pdb|3FWI|A Chain A, Ferric Camphor Bound Cytochrome P450cam Containing A
Selenocysteine As The 5th Heme Ligand, Tetragonal
Crystal Form
pdb|3FWJ|A Chain A, Ferric Camphor Bound Cytochrome P450cam Containing A
Selenocysteine As The 5th Heme Ligand, Orthorombic
Crystal Form
Length = 405
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 56/276 (20%), Positives = 107/276 (38%), Gaps = 48/276 (17%)
Query: 228 VLQMLKAVLSELIPLIKYLNLKIFDPRISQFFSNLVKTNLSY-----REKNNIKRDDFLN 282
+ +L + E IP +KYL ++ P S F+ + Y ++ D ++
Sbjct: 153 IFMLLAGLPEEDIPHLKYLTDQMTRPDGSMTFAEAKEALYDYLIPIIEQRRQKPGTDAIS 212
Query: 283 IMMQLQIAQRGKTLSPDDVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQS 342
I+ Q+ R +T D + GG +T + L+F + LA++P+
Sbjct: 213 IVANGQVNGR---------PITSDEAKRMCGLLLVGGLDTVVNFLSFSMEFLAKSPE--- 260
Query: 343 KLRQEIMATKKKEGELTYEICHKMSYLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLT 402
RQE++ ++ + +E LR + SL RI Y+ +
Sbjct: 261 -HRQELIERPER--------------IPAACEELLRRF-SLVADGRILTSDYEF--HGVQ 302
Query: 403 LDVGTKISIPTFAIHYDPEYYPDPEKFDPERFSPENIE-SRPHYTYLPFGDGPRNCIGMR 461
L G +I +P D + E P +++ SR ++ FG G +G
Sbjct: 303 LKKGDQILLPQMLSGLD----------ERENACPMHVDFSRQKVSHTTFGHGSHLXLGQH 352
Query: 462 FGTIQFKIGLAQLISNF-EFSIDSANATFEYLKGSI 496
+Q + L + ++ +FSI + A ++ G +
Sbjct: 353 LARLQIIVTLKEWLTRIPDFSI-APGAQIQHKSGIV 387
>pdb|3FWF|A Chain A, Ferric Camphor Bound Cytochrome P450cam Containing A
Selenocysteine As The 5th Heme Ligand, Monoclinic
Crystal Form
pdb|3FWF|B Chain B, Ferric Camphor Bound Cytochrome P450cam Containing A
Selenocysteine As The 5th Heme Ligand, Monoclinic
Crystal Form
Length = 405
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 56/276 (20%), Positives = 107/276 (38%), Gaps = 48/276 (17%)
Query: 228 VLQMLKAVLSELIPLIKYLNLKIFDPRISQFFSNLVKTNLSY-----REKNNIKRDDFLN 282
+ +L + E IP +KYL ++ P S F+ + Y ++ D ++
Sbjct: 153 IFMLLAGLPEEDIPHLKYLTDQMTRPDGSMTFAEAKEALYDYLIPIIEQRRQKPGTDAIS 212
Query: 283 IMMQLQIAQRGKTLSPDDVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQS 342
I+ Q+ R +T D + GG +T + L+F + LA++P+
Sbjct: 213 IVANGQVNGR---------PITSDEAKRMCGLLLVGGLDTVVNFLSFSMEFLAKSPE--- 260
Query: 343 KLRQEIMATKKKEGELTYEICHKMSYLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLT 402
RQE++ ++ + +E LR + SL RI Y+ +
Sbjct: 261 -HRQELIQRPER--------------IPAACEELLRRF-SLVADGRILTSDYEF--HGVQ 302
Query: 403 LDVGTKISIPTFAIHYDPEYYPDPEKFDPERFSPENIE-SRPHYTYLPFGDGPRNCIGMR 461
L G +I +P D + E P +++ SR ++ FG G +G
Sbjct: 303 LKKGDQILLPQMLSGLD----------ERENACPMHVDFSRQKVSHTTFGHGSHLXLGQH 352
Query: 462 FGTIQFKIGLAQLISNF-EFSIDSANATFEYLKGSI 496
+Q + L + ++ +FSI + A ++ G +
Sbjct: 353 LARLQIIVTLKEWLTRIPDFSI-APGAQIQHKSGIV 387
>pdb|3A4Z|A Chain A, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A4Z|B Chain B, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A4Z|C Chain C, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A4Z|D Chain D, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A4Z|E Chain E, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A50|A Chain A, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A50|B Chain B, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A50|C Chain C, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A50|D Chain D, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A50|E Chain E, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A51|A Chain A, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
pdb|3A51|B Chain B, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
pdb|3A51|C Chain C, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
pdb|3A51|D Chain D, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
pdb|3A51|E Chain E, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
Length = 411
Score = 34.3 bits (77), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 31/179 (17%), Positives = 72/179 (40%), Gaps = 28/179 (15%)
Query: 299 DDVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGEL 358
D ++ + + A + + G+ET+ +++ + L +PD Q KL
Sbjct: 217 DGDRLSQEELVAMAMLLLIAGHETTVNLIGNGVLALLTHPD-QRKL-------------- 261
Query: 359 TYEICHKMSYLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKISIPTFAIHY 418
+ S + +E LR + Q I + + +T+ G + + A +
Sbjct: 262 ---LAEDPSLISSAVEEFLRFDSPVSQAP-IRFTAEDVTYSGVTIPAGEMVMLGLAAANR 317
Query: 419 DPEYYPDPEKFDPERFSPENIESRPHYTYLPFGDGPRNCIGMRFGTIQFKIGLAQLISN 477
D ++ P+P++ D R + + FG G C+G + ++ ++ + +L ++
Sbjct: 318 DADWMPEPDRLDITRDASGGVF---------FGHGIHFCLGAQLARLEGRVAIGRLFAD 367
>pdb|2CP4|A Chain A, Crystal Structure Of The Cytochrome P450-Cam Active Site
Mutant Thr252ala
Length = 414
Score = 34.3 bits (77), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 55/276 (19%), Positives = 106/276 (38%), Gaps = 48/276 (17%)
Query: 228 VLQMLKAVLSELIPLIKYLNLKIFDPRISQFFSNLVKTNLSY-----REKNNIKRDDFLN 282
+ +L + E IP +KYL ++ P S F+ + Y ++ D ++
Sbjct: 162 IFMLLAGLPEEDIPHLKYLTDQMTRPDGSMTFAEAKEALYDYLIPIIEQRRQKPGTDAIS 221
Query: 283 IMMQLQIAQRGKTLSPDDVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQS 342
I+ Q+ R +T D + GG + + L+F + LA++P+
Sbjct: 222 IVANGQVNGR---------PITSDEAKRMCGLLLVGGLDAVVNFLSFSMEFLAKSPE--- 269
Query: 343 KLRQEIMATKKKEGELTYEICHKMSYLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLT 402
RQE++ ++ + +E LR + SL RI Y+ +
Sbjct: 270 -HRQELIERPER--------------IPAACEELLRRF-SLVADGRILTSDYEF--HGVQ 311
Query: 403 LDVGTKISIPTFAIHYDPEYYPDPEKFDPERFSPENIE-SRPHYTYLPFGDGPRNCIGMR 461
L G +I +P D + E P +++ SR ++ FG G C+G
Sbjct: 312 LKKGDQILLPQMLSGLD----------ERENACPMHVDFSRQKVSHTTFGHGSHLCLGQH 361
Query: 462 FGTIQFKIGLAQLISNF-EFSIDSANATFEYLKGSI 496
+ + L + ++ +FSI + A ++ G +
Sbjct: 362 LARREIIVTLKEWLTRIPDFSI-APGAQIQHKSGIV 396
>pdb|3A4G|A Chain A, Structure Of Cytochrome P450 Vdh From Pseudonocardia
Autotrophica (Trigonal Crystal Form)
pdb|3A4H|A Chain A, Structure Of Cytochrome P450 Vdh From Pseudonocardia
Autotrophica (Orthorhombic Crystal Form)
Length = 411
Score = 34.3 bits (77), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 31/179 (17%), Positives = 72/179 (40%), Gaps = 28/179 (15%)
Query: 299 DDVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGEL 358
D ++ + + A + + G+ET+ +++ + L +PD Q KL
Sbjct: 217 DGDRLSQEELVAMAMLLLIAGHETTVNLIGNGVLALLTHPD-QRKL-------------- 261
Query: 359 TYEICHKMSYLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKISIPTFAIHY 418
+ S + +E LR + Q I + + +T+ G + + A +
Sbjct: 262 ---LAEDPSLISSAVEEFLRFDSPVSQAP-IRFTAEDVTYSGVTIPAGEMVMLGLAAANR 317
Query: 419 DPEYYPDPEKFDPERFSPENIESRPHYTYLPFGDGPRNCIGMRFGTIQFKIGLAQLISN 477
D ++ P+P++ D R + + FG G C+G + ++ ++ + +L ++
Sbjct: 318 DADWMPEPDRLDITRDASGGVF---------FGHGIHFCLGAQLARLEGRVAIGRLFAD 367
>pdb|2RCM|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a) At 1.73 A Resolution
pdb|2RCM|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a) At 1.73 A Resolution
pdb|3DSJ|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 13(S)-Hod At 1.60 A
Resolution
pdb|3DSJ|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 13(S)-Hod At 1.60 A
Resolution
pdb|3DSK|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 12r,13s-Vernolic Acid At
1.55 A Resolution
pdb|3DSK|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 12r,13s-Vernolic Acid At
1.55 A Resolution
Length = 495
Score = 34.3 bits (77), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 49/140 (35%), Gaps = 24/140 (17%)
Query: 340 IQSKLRQEIMAT-KKKEGELTYEICHKMSYLDKVTKEALRMYPSLPQLDRISVKKYKLPN 398
+ ++L +EI + K GELT KM V E LR P + +Y
Sbjct: 317 VHNRLAEEIRSVIKSNGGELTMGAIEKMELTKSVVYECLRFEPPV-------TAQYGRAK 369
Query: 399 TDLTL---DVGTKISIPTFAIHYDPEYYPDPEKFD------PERFSPENIESRPHYTYLP 449
DL + D K+ Y P DP+ FD PERF E E +
Sbjct: 370 KDLVIESHDAAFKVKAGEMLYGYQPLATRDPKIFDRADEFVPERFVGEEGEKLLRHVLWS 429
Query: 450 FGD-------GPRNCIGMRF 462
G G + C G F
Sbjct: 430 NGPETETPTVGNKQCAGKDF 449
>pdb|2FR7|A Chain A, Crystal Structure Of Cytochrome P450 Cyp199a2
pdb|4DNJ|A Chain A, The Crystal Structures Of 4-Methoxybenzoate Bound Cyp199a2
Length = 412
Score = 34.3 bits (77), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 33/157 (21%), Positives = 64/157 (40%), Gaps = 29/157 (18%)
Query: 318 GGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSYLDKVTKEAL 377
G +T+ + + +Y LAR PD ++LR + S +EA+
Sbjct: 251 AGLDTTVNGIAAAVYCLARFPDEFARLRAD------------------PSLARNAFEEAV 292
Query: 378 RMYPSLPQLDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPEYYPDPEKFDPERFSPE 437
R + R + + +L T+ G K+ + + + DP + DP+++D
Sbjct: 293 RFESPVQTFFRTTTRDVELAGA--TIGEGEKVLMFLGSANRDPRRWDDPDRYD------- 343
Query: 438 NIESRPHYTYLPFGDGPRNCIGMRFGTIQFKIGLAQL 474
+R ++ FG G C+G ++ ++ LA L
Sbjct: 344 --ITRKTSGHVGFGSGVHMCVGQLVARLEGEVVLAAL 378
>pdb|2RCH|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hod At 1.85 A Resolution
pdb|2RCH|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hod At 1.85 A Resolution
pdb|2RCL|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 12r,13s-Vernolic Acid At 2.4 A Resolution
pdb|2RCL|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 12r,13s-Vernolic Acid At 2.4 A Resolution
pdb|3CLI|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) At 1.80 A
Resolution
pdb|3CLI|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) At 1.80 A
Resolution
pdb|3DSI|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hot At 1.60 A Resolution
pdb|3DSI|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hot At 1.60 A Resolution
Length = 495
Score = 34.3 bits (77), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 42/111 (37%), Gaps = 17/111 (15%)
Query: 340 IQSKLRQEIMAT-KKKEGELTYEICHKMSYLDKVTKEALRMYPSLPQLDRISVKKYKLPN 398
+ ++L +EI + K GELT KM V E LR P + +Y
Sbjct: 317 VHNRLAEEIRSVIKSNGGELTMGAIEKMELTKSVVYECLRFEPPV-------TAQYGRAK 369
Query: 399 TDLTL---DVGTKISIPTFAIHYDPEYYPDPEKFD------PERFSPENIE 440
DL + D K+ Y P DP+ FD PERF E E
Sbjct: 370 KDLVIESHDAAFKVKAGEMLYGYQPLATRDPKIFDRADEFVPERFVGEEGE 420
>pdb|3ABB|A Chain A, Crystal Structure Of Cyp105d6
Length = 408
Score = 33.9 bits (76), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 32/177 (18%), Positives = 67/177 (37%), Gaps = 29/177 (16%)
Query: 302 EMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYE 361
++ D + + V G+ET+ + + L ++P ++I + G ++
Sbjct: 227 DLDHDEVVMIALVLLVAGHETTVNAIALGALTLIQHP-------EQIDVLLRDPGAVS-- 277
Query: 362 ICHKMSYLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPE 421
V +E LR + R++ + ++ T+ G + + ++ D +
Sbjct: 278 ---------GVVEELLRFTSVSDHIVRMAKEDIEVGGA--TIKAGDAVLVSITLMNRDAK 326
Query: 422 YYPDPEKFDPERFSPENIESRPHYTYLPFGDGPRNCIGMRFGTIQFKIGLAQLISNF 478
Y +P+ FD R +R H FG G C+G + +I L L +
Sbjct: 327 AYENPDIFDARR------NARHHVG---FGHGIHQCLGQNLARAELEIALGGLFARI 374
>pdb|1GEB|A Chain A, X-Ray Crystal Structure And Catalytic Properties Of
Thr252ile Mutant Of Cytochrome P450cam
Length = 415
Score = 33.9 bits (76), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 55/276 (19%), Positives = 106/276 (38%), Gaps = 48/276 (17%)
Query: 228 VLQMLKAVLSELIPLIKYLNLKIFDPRISQFFSNLVKTNLSY-----REKNNIKRDDFLN 282
+ +L + E IP +KYL ++ P S F+ + Y ++ D ++
Sbjct: 163 IFMLLAGLPEEDIPHLKYLTDQMTRPDGSMTFAEAKEALYDYLIPIIEQRRQKPGTDAIS 222
Query: 283 IMMQLQIAQRGKTLSPDDVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQS 342
I+ Q+ R +T D + GG + + L+F + LA++P+
Sbjct: 223 IVANGQVNGR---------PITSDEAKRMCGLLLVGGLDIVVNFLSFSMEFLAKSPE--- 270
Query: 343 KLRQEIMATKKKEGELTYEICHKMSYLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLT 402
RQE++ ++ + +E LR + SL RI Y+ +
Sbjct: 271 -HRQELIERPER--------------IPAACEELLRRF-SLVADGRILTSDYEF--HGVQ 312
Query: 403 LDVGTKISIPTFAIHYDPEYYPDPEKFDPERFSPENIE-SRPHYTYLPFGDGPRNCIGMR 461
L G +I +P D + E P +++ SR ++ FG G C+G
Sbjct: 313 LKKGDQILLPQMLSGLD----------ERENACPMHVDFSRQKVSHTTFGHGSHLCLGQH 362
Query: 462 FGTIQFKIGLAQLISNF-EFSIDSANATFEYLKGSI 496
+ + L + ++ +FSI + A ++ G +
Sbjct: 363 LARREIIVTLKEWLTRIPDFSI-APGAQIQHKSGIV 397
>pdb|3OO3|A Chain A, Crystal Structure Of The Orf6 (Cyp165d3) Monooxygenase
Involved In Teicoplanin Biosynthesis
Length = 384
Score = 33.5 bits (75), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 39/205 (19%), Positives = 80/205 (39%), Gaps = 44/205 (21%)
Query: 276 KRDDFLNIMMQLQIAQRGKTLSPDDVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYELA 335
KR D + M+ + + + G E++D+ + + E ++ L + L
Sbjct: 191 KRRDPGDGMIGVIVREHG-------AEISDEELAGLAEGNLIMAAEQMAAQLAVAVLLLV 243
Query: 336 RNPDIQSKLRQEIMATKKKEGELTYEICHKMSYLDKVTKEALRMYPSLPQLD--RISVKK 393
+PD + LR+ K +D T+E LR + S+ + R+++
Sbjct: 244 THPDQMALLRE------------------KPELIDSATEEVLR-HASIVEAPAPRVALAD 284
Query: 394 YKLPNTDLTLDVGTKISIPTFAIHYDPEYYPDPEKFDPERFSPENIESRPHYTYLPFGDG 453
++ D+ G ++ A + P ++FD +R T++ FG G
Sbjct: 285 VRMAGRDIH--AGDVLTCSMLATNRAPG-----DRFD---------ITREKATHMAFGHG 328
Query: 454 PRNCIGMRFGTIQFKIGLAQLISNF 478
+CIG +Q ++ L ++ F
Sbjct: 329 IHHCIGAPLARLQLRVALPAVVGRF 353
>pdb|3O1A|A Chain A, Structure Of Oxye (Cyp165d3), A Cytochrome P450 Involved
In Teicoplanin Biosynthesis
Length = 417
Score = 33.5 bits (75), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 39/205 (19%), Positives = 80/205 (39%), Gaps = 44/205 (21%)
Query: 276 KRDDFLNIMMQLQIAQRGKTLSPDDVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYELA 335
KR D + M+ + + + G E++D+ + + E ++ L + L
Sbjct: 224 KRRDPGDGMIGVIVREHG-------AEISDEELAGLAEGNLIMAAEQMAAQLAVAVLLLV 276
Query: 336 RNPDIQSKLRQEIMATKKKEGELTYEICHKMSYLDKVTKEALRMYPSLPQLD--RISVKK 393
+PD + LR+ K +D T+E LR + S+ + R+++
Sbjct: 277 THPDQMALLRE------------------KPELIDSATEEVLR-HASIVEAPAPRVALAD 317
Query: 394 YKLPNTDLTLDVGTKISIPTFAIHYDPEYYPDPEKFDPERFSPENIESRPHYTYLPFGDG 453
++ D+ G ++ A + P ++FD +R T++ FG G
Sbjct: 318 VRMAGRDI--HAGDVLTCSMLATNRAPG-----DRFD---------ITREKATHMAFGHG 361
Query: 454 PRNCIGMRFGTIQFKIGLAQLISNF 478
+CIG +Q ++ L ++ F
Sbjct: 362 IHHCIGAPLARLQLRVALPAVVGRF 386
>pdb|3BUJ|A Chain A, Crystal Structure Of Calo2
Length = 397
Score = 32.7 bits (73), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 66/329 (20%), Positives = 119/329 (36%), Gaps = 80/329 (24%)
Query: 139 RLRNKLSPTFTSGKIKYMFPLIKKCSDQLITTIRKQIGESKQMSLEVKDYCARYTTDVIG 198
RLR + P F+ ++ + P+I D L+ + AR DV+
Sbjct: 89 RLRGVVGPAFSPSALRRLEPVIAGTVDDLL-----------------RPALARGAMDVVD 131
Query: 199 STAFGIEINS----LENPDSEFRQVSLLVMKPSVLQMLKAVLSELIPLIKYLNLKIFDPR 254
A+ + + + L P +++ V + + V L +++
Sbjct: 132 ELAYPLALRAVLGLLGLPAADWGAVG---------RWSRDVGRTLDRGASAEDMRRGHAA 182
Query: 255 ISQFFSNLVKTNLSYREKNNIKRDDFLNIMMQLQIAQRGKTLSPDDVEMTDDVITAQSFV 314
I++F + + R + +D L +M+ RG M+ + I +
Sbjct: 183 IAEFADYVERALARRRREGG---EDLLALMLDAH--DRGL--------MSRNEIVSTVVT 229
Query: 315 FFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSYLDKVTK 374
F F G+ET +S + + L +PD LR+ + L + +
Sbjct: 230 FIFTGHETVASQVGNAVLSLLAHPDQLDLLRR------------------RPDLLAQAVE 271
Query: 375 EALRMYPSLP----QLDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPEYYPDPEKFD 430
E LR PS+ QLD + V+ + + + A + DP Y P+ FD
Sbjct: 272 ECLRYDPSVQSNTRQLD-VDVELRGRRLRRDDV-----VVVLAGAANRDPRRYDRPDDFD 325
Query: 431 PERFSPENIESRPHYTYLPFGDGPRNCIG 459
ER + + S + FG G R C+G
Sbjct: 326 IER---DPVPS------MSFGAGMRYCLG 345
>pdb|1GWI|A Chain A, The 1.92 A Structure Of Streptomyces Coelicolor A3(2)
Cyp154c1: A New Monooxygenase That Functionalizes
Macrolide Ring Systems
pdb|1GWI|B Chain B, The 1.92 A Structure Of Streptomyces Coelicolor A3(2)
Cyp154c1: A New Monooxygenase That Functionalizes
Macrolide Ring Systems
Length = 411
Score = 31.6 bits (70), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 37/178 (20%), Positives = 70/178 (39%), Gaps = 30/178 (16%)
Query: 303 MTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEI 362
+TD I + + G+ET+ S++ + L+ +P+ ++ + GE +
Sbjct: 227 LTDAEIVSTLQLMVAAGHETTISLIVNAVVNLSTHPEQRALVLS---------GEAEWS- 276
Query: 363 CHKMSYLDKVTKEALRM-YPSLPQLDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPE 421
V +E LR P+ L R + + +P D + G + + A+ D
Sbjct: 277 --------AVVEETLRFSTPTSHVLIRFAAED--VPVGDRVIPAGDALIVSYGALGRDER 326
Query: 422 YY-PDPEKFDPERFSPENIESRPHYTYLPFGDGPRNCIGMRFGTIQFKIGLAQLISNF 478
+ P ++FD R S ++ FG GP C G ++ + L L + F
Sbjct: 327 AHGPTADRFDLTRTSGNR--------HISFGHGPHVCPGAALSRMEAGVALPALYARF 376
>pdb|3LXH|A Chain A, Crystal Structure Of Cytochrome P450 Cyp101d1
pdb|3LXH|B Chain B, Crystal Structure Of Cytochrome P450 Cyp101d1
pdb|3LXI|A Chain A, Crystal Structure Of Camphor-Bound Cyp101d1
pdb|3LXI|B Chain B, Crystal Structure Of Camphor-Bound Cyp101d1
Length = 421
Score = 30.8 bits (68), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 69/185 (37%), Gaps = 31/185 (16%)
Query: 299 DDVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGEL 358
D M DD + GG +T + L F + L+R+P+ +++R+E + ++ EL
Sbjct: 237 DGKPMPDDRALGLVSLLLLGGLDTVVNFLGFMMIYLSRHPETVAEMRREPLKLQRGVEEL 296
Query: 359 TYEICHKMSYLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKISIPTFAIHY 418
V +A R V + T L G I +PT
Sbjct: 297 FRRFA--------VVSDA-----------RYVVSDMEFHGT--MLKEGDLILLPTALHGL 335
Query: 419 DPEYYPDPEKFDPERFSPENIESRPHYTYLPFGDGPRNCIGMRFGTIQFKIGLAQLISNF 478
D ++ DP D SR T+ F GP C GM ++ + L + ++
Sbjct: 336 DDRHHDDPMTVD---------LSRRDVTHSTFAQGPHRCAGMHLARLEVTVMLQEWLARI 386
Query: 479 -EFSI 482
EF +
Sbjct: 387 PEFRL 391
>pdb|3CV8|A Chain A, Crystal Structure Of Vitamin D Hydroxylase Cytochrome P450
105a1 (R84f Mutant)
Length = 412
Score = 30.8 bits (68), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 32/174 (18%), Positives = 66/174 (37%), Gaps = 28/174 (16%)
Query: 302 EMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYE 361
E+ + + + + + G+ET++S+ + + L +P+ + LR +
Sbjct: 228 EIDREELISTAMLLLIAGHETTASMTSLSVITLLDHPEQYAALRAD-------------- 273
Query: 362 ICHKMSYLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPE 421
S + +E LR Y ++ + V + + G + + + D
Sbjct: 274 ----RSLVPGAVEELLR-YLAIADIAGGRVATADIEVEGQLIRAGEGVIVVNSIANRDGT 328
Query: 422 YYPDPEKFDPERFSPENIESRPHYTYLPFGDGPRNCIGMRFGTIQFKIGLAQLI 475
Y DP+ D R +R H L FG G C+G ++ ++ L L+
Sbjct: 329 VYEDPDALDIHR------SARHH---LAFGFGVHQCLGQNLARLELEVILNALM 373
>pdb|2ZBX|A Chain A, Crystal Structure Of Vitamin D Hydroxylase Cytochrome P450
105a1 (Wild Type) With Imidazole Bound
Length = 412
Score = 30.8 bits (68), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 32/174 (18%), Positives = 66/174 (37%), Gaps = 28/174 (16%)
Query: 302 EMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYE 361
E+ + + + + + G+ET++S+ + + L +P+ + LR +
Sbjct: 228 EIDREELISTAMLLLIAGHETTASMTSLSVITLLDHPEQYAALRAD-------------- 273
Query: 362 ICHKMSYLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPE 421
S + +E LR Y ++ + V + + G + + + D
Sbjct: 274 ----RSLVPGAVEELLR-YLAIADIAGGRVATADIEVEGQLIRAGEGVIVVNSIANRDGT 328
Query: 422 YYPDPEKFDPERFSPENIESRPHYTYLPFGDGPRNCIGMRFGTIQFKIGLAQLI 475
Y DP+ D R +R H L FG G C+G ++ ++ L L+
Sbjct: 329 VYEDPDALDIHR------SARHH---LAFGFGVHQCLGQNLARLELEVILNALM 373
>pdb|2ZBY|A Chain A, Crystal Structure Of Vitamin D Hydroxylase Cytochrome P450
105a1 (R84a Mutant)
pdb|2ZBZ|A Chain A, Crystal Structure Of Vitamin D Hydroxylase Cytochrome P450
105a1 (R84a Mutant) In Complex With
1,25-Dihydroxyvitamin D3
Length = 412
Score = 30.4 bits (67), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 32/174 (18%), Positives = 66/174 (37%), Gaps = 28/174 (16%)
Query: 302 EMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYE 361
E+ + + + + + G+ET++S+ + + L +P+ + LR +
Sbjct: 228 EIDREELISTAMLLLIAGHETTASMTSLSVITLLDHPEQYAALRAD-------------- 273
Query: 362 ICHKMSYLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPE 421
S + +E LR Y ++ + V + + G + + + D
Sbjct: 274 ----RSLVPGAVEELLR-YLAIADIAGGRVATADIEVEGQLIRAGEGVIVVNSIANRDGT 328
Query: 422 YYPDPEKFDPERFSPENIESRPHYTYLPFGDGPRNCIGMRFGTIQFKIGLAQLI 475
Y DP+ D R +R H L FG G C+G ++ ++ L L+
Sbjct: 329 VYEDPDALDIHR------SARHH---LAFGFGVHQCLGQNLARLELEVILNALM 373
>pdb|3CV9|A Chain A, Crystal Structure Of Vitamin D Hydroxylase Cytochrome P450
105a1 (R73aR84A MUTANT) IN COMPLEX WITH 1ALPHA,25-
Dihydroxyvitamin D3
Length = 412
Score = 30.4 bits (67), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 32/174 (18%), Positives = 66/174 (37%), Gaps = 28/174 (16%)
Query: 302 EMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYE 361
E+ + + + + + G+ET++S+ + + L +P+ + LR +
Sbjct: 228 EIDREELISTAMLLLIAGHETTASMTSLSVITLLDHPEQYAALRAD-------------- 273
Query: 362 ICHKMSYLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPE 421
S + +E LR Y ++ + V + + G + + + D
Sbjct: 274 ----RSLVPGAVEELLR-YLAIADIAGGRVATADIEVEGQLIRAGEGVIVVNSIANRDGT 328
Query: 422 YYPDPEKFDPERFSPENIESRPHYTYLPFGDGPRNCIGMRFGTIQFKIGLAQLI 475
Y DP+ D R +R H L FG G C+G ++ ++ L L+
Sbjct: 329 VYEDPDALDIHR------SARHH---LAFGFGVHQCLGQNLARLELEVILNALM 373
>pdb|3HM8|A Chain A, Crystal Structure Of The C-Terminal Hexokinase Domain Of
Human Hk3
pdb|3HM8|B Chain B, Crystal Structure Of The C-Terminal Hexokinase Domain Of
Human Hk3
pdb|3HM8|C Chain C, Crystal Structure Of The C-Terminal Hexokinase Domain Of
Human Hk3
pdb|3HM8|D Chain D, Crystal Structure Of The C-Terminal Hexokinase Domain Of
Human Hk3
Length = 445
Score = 29.3 bits (64), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 19/36 (52%)
Query: 451 GDGPRNCIGMRFGTIQFKIGLAQLISNFEFSIDSAN 486
GD R CI M +G LA L + F+ S+D A+
Sbjct: 227 GDSGRMCINMEWGAFGDDGSLAMLSTRFDASVDQAS 262
>pdb|2YJN|B Chain B, Structure Of The Glycosyltransferase Eryciii From The
Erythromycin Biosynthetic Pathway, In Complex With Its
Activating Partner, Erycii
Length = 381
Score = 28.9 bits (63), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 25/142 (17%), Positives = 60/142 (42%), Gaps = 24/142 (16%)
Query: 296 LSPDDVEMTDDVITA----QSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMAT 351
LSP + +T+ + A + F G E +++ + + ++ P + ++ + A
Sbjct: 196 LSPQQLAVTEAAVAALPADPALRALFAGAEMTANTVVDAVLAVSAEPGLAERIADDPAAA 255
Query: 352 KKKEGELTYEICHKMSYLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKISI 411
++ E LR++P+L R + + +L + + G ++ +
Sbjct: 256 QR------------------TVAEVLRLHPALHLERRTATAEVRL--GEHVIGEGEEVVV 295
Query: 412 PTFAIHYDPEYYPDPEKFDPER 433
A + DPE + +P++ D +R
Sbjct: 296 VVAAANRDPEVFAEPDRLDVDR 317
>pdb|2RFB|A Chain A, Crystal Structure Of A Cytochrome P450 From The
Thermoacidophilic Archaeon Picrophilus Torridus
pdb|2RFB|B Chain B, Crystal Structure Of A Cytochrome P450 From The
Thermoacidophilic Archaeon Picrophilus Torridus
pdb|2RFB|C Chain C, Crystal Structure Of A Cytochrome P450 From The
Thermoacidophilic Archaeon Picrophilus Torridus
pdb|2RFC|A Chain A, Ligand Bound (4-Phenylimidazole) Crystal Structure Of A
Cytochrome P450 From The Thermoacidophilic Archaeon
Picrophilus Torridus
pdb|2RFC|B Chain B, Ligand Bound (4-Phenylimidazole) Crystal Structure Of A
Cytochrome P450 From The Thermoacidophilic Archaeon
Picrophilus Torridus
pdb|2RFC|C Chain C, Ligand Bound (4-Phenylimidazole) Crystal Structure Of A
Cytochrome P450 From The Thermoacidophilic Archaeon
Picrophilus Torridus
pdb|2RFC|D Chain D, Ligand Bound (4-Phenylimidazole) Crystal Structure Of A
Cytochrome P450 From The Thermoacidophilic Archaeon
Picrophilus Torridus
Length = 343
Score = 28.9 bits (63), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 32/168 (19%), Positives = 65/168 (38%), Gaps = 34/168 (20%)
Query: 313 FVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSYLDKV 372
+ GG ET+++++ + + NPDI A K + G
Sbjct: 183 MLLIIGGNETTTNLIGNMIRVIDENPDIIDD------ALKNRSG---------------F 221
Query: 373 TKEALRMYPSLPQL-DRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPEYYPDPEKFDP 431
+E LR Y + L R + + + N + G ++ + + + D ++ +P+ F
Sbjct: 222 VEETLRYYSPIQFLPHRFAAEDSYINNKKIK--KGDQVIVYLGSANRDETFFDEPDLFKI 279
Query: 432 ERFSPENIESRPHYTYLPFGDGPRNCIGMRFGTIQFKIGLAQLISNFE 479
R +L FG G C+G ++ I L ++++F+
Sbjct: 280 GR----------REMHLAFGIGIHMCLGAPLARLEASIALNDILNHFK 317
>pdb|4AKL|A Chain A, Structure Of The Crimean-Congo Haemorrhagic Fever Virus
Nucleocapsid Protein
pdb|4AKL|B Chain B, Structure Of The Crimean-Congo Haemorrhagic Fever Virus
Nucleocapsid Protein
Length = 482
Score = 28.9 bits (63), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 37/70 (52%), Gaps = 5/70 (7%)
Query: 321 ETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSYLDKVTKEALRMY 380
ET +V F L+EL ++P K+++ +++T K G+ YE+ D + + M+
Sbjct: 322 ETFPTVSQF-LFELGKHPRGTKKMKKALLSTPMKWGKKLYELFAD----DSFQQNRIYMH 376
Query: 381 PSLPQLDRIS 390
P++ RIS
Sbjct: 377 PAVLTAGRIS 386
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.323 0.140 0.415
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,049,290
Number of Sequences: 62578
Number of extensions: 665119
Number of successful extensions: 1771
Number of sequences better than 100.0: 232
Number of HSP's better than 100.0 without gapping: 120
Number of HSP's successfully gapped in prelim test: 112
Number of HSP's that attempted gapping in prelim test: 1363
Number of HSP's gapped (non-prelim): 248
length of query: 500
length of database: 14,973,337
effective HSP length: 103
effective length of query: 397
effective length of database: 8,527,803
effective search space: 3385537791
effective search space used: 3385537791
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 53 (25.0 bits)