RPS-BLAST 2.2.26 [Sep-21-2011]
Database: CDD.v3.10
44,354 sequences; 10,937,602 total letters
Searching..................................................done
Query= psy2446
(500 letters)
>gnl|CDD|215689 pfam00067, p450, Cytochrome P450. Cytochrome P450s are
haem-thiolate proteins involved in the oxidative
degradation of various compounds. They are particularly
well known for their role in the degradation of
environmental toxins and mutagens. They can be divided
into 4 classes, according to the method by which
electrons from NAD(P)H are delivered to the catalytic
site. Sequence conservation is relatively low within the
family - there are only 3 absolutely conserved residues
- but their general topography and structural fold are
highly conserved. The conserved core is composed of a
coil termed the 'meander', a four-helix bundle, helices
J and K, and two sets of beta-sheets. These constitute
the haem-binding loop (with an absolutely conserved
cysteine that serves as the 5th ligand for the haem
iron), the proton-transfer groove and the absolutely
conserved EXXR motif in helix K. While prokaryotic P450s
are soluble proteins, most eukaryotic P450s are
associated with microsomal membranes. their general
enzymatic function is to catalyze regiospecific and
stereospecific oxidation of non-activated hydrocarbons
at physiological temperatures.
Length = 461
Score = 301 bits (773), Expect = 2e-97
Identities = 131/440 (29%), Positives = 208/440 (47%), Gaps = 40/440 (9%)
Query: 61 FHQMHCEFYNKIKYDLKLPYG---GLYHLMTPKLMVTDPELYKYILIKDFDHFVDRGI-- 115
H + + K YG LY P ++++ PE K +LIK + F R
Sbjct: 22 LHSVFTKLQKK--------YGPIFRLYLGPKPVVVLSGPEAVKEVLIKKGEEFSGRPDEP 73
Query: 116 GESDAKRDPIEGHLFGSKGEYWKRLRNKLSPTFTSGKIKYMFPLIKKCSDQLITTIRKQI 175
+ ++ + + + G W++LR L+PTFTS P +++ + L+ +RK
Sbjct: 74 WFATSRGPFLGKGIVFANGPRWRQLRRFLTPTFTSFGKLSFEPRVEEEARDLVEKLRKTA 133
Query: 176 GESKQMSLEVKDYCARYTTDVIGSTAFGIEINSLENPDS----EFRQVSLLVMKPSVLQM 231
GE +++ D R +VI S FG SLE+P + Q ++ Q+
Sbjct: 134 GEPG--VIDITDLLFRAALNVICSILFGERFGSLEDPKFLELVKAVQELSSLLSSPSPQL 191
Query: 232 LKAVLSELIPLIKYLNLKIFD------PRISQFFSNLVKTNLSYREKNNIKRDDFLNIMM 285
L L P++KY +I L++ + DFL+ ++
Sbjct: 192 LD-----LFPILKYFPGPHGRKLKRARKKIKDLLDKLIEERRETLDSAKKSPRDFLDALL 246
Query: 286 QLQIAQRGKTLSPDDVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLR 345
D ++TD+ + A FF G +T+SS L++ LYELA++P++Q KLR
Sbjct: 247 L-------AKEEEDGSKLTDEELRATVLELFFAGTDTTSSTLSWALYELAKHPEVQEKLR 299
Query: 346 QEIMATKKKEGELTYEICHKMSYLDKVTKEALRMYPSLP-QLDRISVKKYKLPNTDLTLD 404
+EI + TY+ M YLD V KE LR++P +P L R K +P +
Sbjct: 300 EEIDEVIGDKRSPTYDDLQNMPYLDAVIKETLRLHPVVPLLLPREVTKDTVIP--GYLIP 357
Query: 405 VGTKISIPTFAIHYDPEYYPDPEKFDPERFSPENIESRPHYTYLPFGDGPRNCIGMRFGT 464
GT + + +A+H DPE +P+PE+FDPERF EN + R + +LPFG GPRNC+G R
Sbjct: 358 KGTLVIVNLYALHRDPEVFPNPEEFDPERFLDENGKFRKSFAFLPFGAGPRNCLGERLAR 417
Query: 465 IQFKIGLAQLISNFEFSIDS 484
++ K+ LA L+ NFE +
Sbjct: 418 MEMKLFLATLLQNFEVELPP 437
>gnl|CDD|225035 COG2124, CypX, Cytochrome P450 [Secondary metabolites biosynthesis,
transport, and catabolism].
Length = 411
Score = 171 bits (434), Expect = 3e-48
Identities = 103/450 (22%), Positives = 173/450 (38%), Gaps = 80/450 (17%)
Query: 42 FSPTFPFGNYGAGFLSRITFHQMHCEFYNKIKYDLKLPYGGLYHLMTPKLM---VTDPEL 98
P P L R+ + + + L P V+ P
Sbjct: 2 PPPPAPKLLGSPFALPRLLEFAP---RFFLERAEDPYGDYFTLRLPGPGDGFWVVSRPAD 58
Query: 99 YKYILIKDFDHFVDR-GIGESDAKRDPIEGH--LFGSKGEYWKRLRNKLSPTFTSGKIKY 155
+ +L +D F G G P+ G L G RLR L+P FT ++
Sbjct: 59 VREVL-RDPRFFSSALGAGLRPRLLRPVLGDGSLLTLDGPEHTRLRKLLAPAFTPRALRG 117
Query: 156 MFPLIKKCSDQLITTIRKQIGESKQMSLEVKDYCARYTTDVIGSTAFGIEINSLENPDSE 215
PLI++ +D+L+ + + + V D+ A T VI + G+ P +
Sbjct: 118 YRPLIREIADRLLDDLWQGGAD------LVLDFAAELTLRVI-AELLGV-------PLED 163
Query: 216 FRQVSLLVMKPSVLQMLKAVLSELIPLIKYLNLKIFDPRISQFFSNLVKTNLSYREKNNI 275
Q + +L + +L P + + + + L+ E+
Sbjct: 164 RPQ-----LLRWSDALLLRLDPDLGPEEPWRRARAARRELDAYLRALIA------ERRAA 212
Query: 276 KRDDFLNIMMQLQIAQRGKTLSPDDVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYELA 335
RDD L++++ + ++DD I + G+ET+++ L + LY L
Sbjct: 213 PRDDLLSLLLSAED--------DGGGRLSDDEIRDELITLLVAGHETTANALAWALYALL 264
Query: 336 RNPDIQSKLRQEIMATKKKEGELTYEICHKMSYLDKVTKEALRMYPSLPQLDRISVKKYK 395
R+PD +KLR E L+ V +E LR+YP +P R+ +
Sbjct: 265 RHPDQLAKLRAEPDRP----------------LLEAVVEETLRLYPPVPLARRV-ATE-- 305
Query: 396 LPNTDLTLDV-----GTKISIPTFAIHYDPEYYPDPEKFDPERFSPENIESRPHYTYLPF 450
D+ L GT + + A + DPE +PDP++FDPERF + +LPF
Sbjct: 306 ----DVELGGYRIPAGTVVLLSIGAANRDPEVFPDPDEFDPERF---------NNAHLPF 352
Query: 451 GDGPRNCIGMRFGTIQFKIGLAQLISNFEF 480
G GP C+G ++ K+ LA+L+ F
Sbjct: 353 GGGPHRCLGAALARLELKVALAELLRRFPL 382
>gnl|CDD|215164 PLN02290, PLN02290, cytokinin trans-hydroxylase.
Length = 516
Score = 156 bits (395), Expect = 8e-42
Identities = 118/421 (28%), Positives = 192/421 (45%), Gaps = 65/421 (15%)
Query: 89 PKLMVTDPELYKYILIK-------------DFDHFVDRGIGESDAKRDPIEGHLFGSKGE 135
P+L +T+ EL K +L K HF+ RG L + G
Sbjct: 105 PRLCLTETELIKELLTKYNTVTGKSWLQQQGTKHFIGRG--------------LLMANGA 150
Query: 136 YWKRLRNKLSPTFTSGKIKYMFPLIKKCSDQLITTIRKQIGESKQMSLEVKDYCARYTTD 195
W R+ +P F ++K + +C+ Q++ +++K + ES Q +E+ +Y R T D
Sbjct: 151 DWYHQRHIAAPAFMGDRLKGYAGHMVECTKQMLQSLQKAV-ESGQTEVEIGEYMTRLTAD 209
Query: 196 VIGSTAFGIEINSLENPDSEFRQVSLLVMKPSVLQMLKAVLSE--LIPLIKYL------N 247
+I T F DS + + + +VLQ L A + P ++
Sbjct: 210 IISRTEF----------DSSYEKGKQIFHLLTVLQRLCAQATRHLCFPGSRFFPSKYNRE 259
Query: 248 LKIFDPRISQFFSNLVKTNLSYREKNNIKR-----DDFLNIMMQLQIAQRGKTLSPDDVE 302
+K + + +++ S R+ I R DD L +++ +R + +
Sbjct: 260 IKSLKGEVERLLMEIIQ---SRRDCVEIGRSSSYGDDLLGMLLNEMEKKRSNGFNLNLQL 316
Query: 303 MTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEI 362
+ D+ T FFF G+ET++ +LT+ L LA NP Q K+R E+ E + +
Sbjct: 317 IMDECKT-----FFFAGHETTALLLTWTLMLLASNPTWQDKVRAEVAEVCGGETP-SVDH 370
Query: 363 CHKMSYLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPEY 422
K++ L+ V E+LR+YP L R++ + KL DL + G I IP AIH+ E
Sbjct: 371 LSKLTLLNMVINESLRLYPPATLLPRMAFEDIKL--GDLHIPKGLSIWIPVLAIHHSEEL 428
Query: 423 Y-PDPEKFDPERFSPENIESRPHYTYLPFGDGPRNCIGMRFGTIQFKIGLAQLISNFEFS 481
+ D +F+P+RF+ H+ +PF GPRNCIG F ++ KI LA LIS F F+
Sbjct: 429 WGKDANEFNPDRFAGRPFAPGRHF--IPFAAGPRNCIGQAFAMMEAKIILAMLISKFSFT 486
Query: 482 I 482
I
Sbjct: 487 I 487
>gnl|CDD|215393 PLN02738, PLN02738, carotene beta-ring hydroxylase.
Length = 633
Score = 149 bits (377), Expect = 7e-39
Identities = 118/434 (27%), Positives = 207/434 (47%), Gaps = 50/434 (11%)
Query: 74 YDLKLPYGGLYHL-MTPK--LMVTDPELYKYILIKDFDHFVDRGIGESDAKRDPIEGH-L 129
Y+L L YGG++ L PK L+V+DP + K+IL +D +GI + + G L
Sbjct: 158 YELFLTYGGIFRLTFGPKSFLIVSDPSIAKHIL-RDNSKAYSKGILAEIL--EFVMGKGL 214
Query: 130 FGSKGEYWKRLRNKLSPTFTSGKIKYMFPLIKKCSDQLITTIRKQIGESKQMSLEVKDYC 189
+ GE W+ R + P + M L + SD+L + S +E++
Sbjct: 215 IPADGEIWRVRRRAIVPALHQKYVAAMISLFGQASDRLCQKLDA--AASDGEDVEMESLF 272
Query: 190 ARYTTDVIGSTAFGIEINSLENPDSEFRQVSLLVMKPSVLQMLKAVLSELIPLIKYLNLK 249
+R T D+IG F + +SL N D+ + V++ + + + + IP+ K
Sbjct: 273 SRLTLDIIGKAVFNYDFDSLSN-DTGIVEAVYTVLREAEDRSVSPIPVWEIPI-----WK 326
Query: 250 IFDPR----------ISQFFSNLVKTNLSYREKNNIK-RDDFLN----IMMQLQIAQRGK 294
PR I+ +L+ E+ ++ ++++N ++ +A
Sbjct: 327 DISPRQRKVAEALKLINDTLDDLIAICKRMVEEEELQFHEEYMNERDPSILHFLLA---- 382
Query: 295 TLSPDDV---EMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMAT 351
S DDV ++ DD++T G+ETS++VLT+ Y L++ P + +KL++E+ +
Sbjct: 383 --SGDDVSSKQLRDDLMT-----MLIAGHETSAAVLTWTFYLLSKEPSVVAKLQEEV-DS 434
Query: 352 KKKEGELTYEICHKMSYLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKISI 411
+ T E K+ Y +V E+LR+YP P L R S++ L + G I I
Sbjct: 435 VLGDRFPTIEDMKKLKYTTRVINESLRLYPQPPVLIRRSLENDML--GGYPIKRGEDIFI 492
Query: 412 PTFAIHYDPEYYPDPEKFDPERF---SPENIESRPHYTYLPFGDGPRNCIGMRFGTIQFK 468
+ +H P+++ D EKF+PER+ P E+ +++YLPFG GPR C+G F + +
Sbjct: 493 SVWNLHRSPKHWDDAEKFNPERWPLDGPNPNETNQNFSYLPFGGGPRKCVGDMFASFENV 552
Query: 469 IGLAQLISNFEFSI 482
+ A L+ F+F +
Sbjct: 553 VATAMLVRRFDFQL 566
>gnl|CDD|173595 PTZ00404, PTZ00404, cytochrome P450; Provisional.
Length = 482
Score = 134 bits (339), Expect = 2e-34
Identities = 120/481 (24%), Positives = 203/481 (42%), Gaps = 48/481 (9%)
Query: 20 LIFLFIKSIFNYRYWKNK--NVFYFSPTFPF---GN-YGAGFLSRITFHQMHCEFYNKIK 73
++FLFI I + Y K K + P GN + G L +M + Y I
Sbjct: 7 ILFLFIFYIIHNAYKKYKKIHKNELKGPIPIPILGNLHQLGNLPHRDLTKMS-KKYGGI- 64
Query: 74 YDLKLPYGGLYHLMTPKLMVTDPELYKYILIKDFDHFVDRGIGESDAKRDPIEGHLFGSK 133
++ + LY ++++DP L + + + +FD+F DR S K + S
Sbjct: 65 --FRIWFADLY-----TVVLSDPILIREMFVDNFDNFSDRPKIPS-IKHGTFYHGIVTSS 116
Query: 134 GEYWKRLRNKLSPTFTSGKIKYMFPLIKKCSDQLITTIRKQIGESKQMSLEVKDYCARYT 193
GEYWKR R + +K+++ L+ D LI +++K ES + E + Y ++T
Sbjct: 117 GEYWKRNREIVGKAMRKTNLKHIYDLLDDQVDVLIESMKKI--ESSGETFEPRYYLTKFT 174
Query: 194 TDVIGSTAFGIEINSLENPDSEFRQVSLL------VMKPSVLQMLKAVLSELIPLIKYLN 247
+ F +I+ + D +++ L V K L V+ PL Y
Sbjct: 175 MSAMFKYIFNEDIS--FDEDIHNGKLAELMGPMEQVFKDLGSGSLFDVIEITQPLY-YQY 231
Query: 248 LKIFD---PRISQFFSNLVKTNLSYREKNNIKRDDFLNIMMQLQIAQRGKTLSPDDVEMT 304
L+ D +I +F Y E + ++ L I + G T + DD+
Sbjct: 232 LEHTDKNFKKIKKFIKE------KYHEHLKTIDPEVPRDLLDLLIKEYG-TNTDDDIL-- 282
Query: 305 DDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICH 364
I A FF G +TS++ L + + L P+IQ K EI +T ++
Sbjct: 283 --SILATILDFFLAGVDTSATSLEWMVLMLCNYPEIQEKAYNEIKSTVNGRNKVLLSDRQ 340
Query: 365 KMSYLDKVTKEALRMYPSLP-QLDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPEYY 423
Y + KE LR P P L R + + + +I I +++ + +Y+
Sbjct: 341 STPYTVAIIKETLRYKPVSPFGLPRSTSNDIIIGGGHF-IPKDAQILINYYSLGRNEKYF 399
Query: 424 PDPEKFDPERFSPENIESRPHYTYLPFGDGPRNCIGMRFGTIQFKIGLAQLISNFEF-SI 482
+PE+FDP RF + + ++PF GPRNC+G +F + + + +I NF+ SI
Sbjct: 400 ENPEQFDPSRF----LNPDSNDAFMPFSIGPRNCVGQQFAQDELYLAFSNIILNFKLKSI 455
Query: 483 D 483
D
Sbjct: 456 D 456
>gnl|CDD|178524 PLN02936, PLN02936, epsilon-ring hydroxylase.
Length = 489
Score = 129 bits (327), Expect = 1e-32
Identities = 115/439 (26%), Positives = 202/439 (46%), Gaps = 69/439 (15%)
Query: 80 YGGLYHLMT-PK--LMVTDPELYKYILIKDFDHFVDRGIGESDAKRDPIEG--HLFGS-- 132
YG +Y L P+ ++V+DP + K++L R G AK E LFGS
Sbjct: 49 YGPVYRLAAGPRNFVVVSDPAIAKHVL---------RNYGSKYAKGLVAEVSEFLFGSGF 99
Query: 133 ---KGEYWKRLRNKLSPT----FTSGKIKYMFPLIKKCSDQLITTIRKQIGESKQMSLEV 185
+GE W R + P+ + S + +F KC+++L+ + + +++E
Sbjct: 100 AIAEGELWTARRRAVVPSLHRRYLSVMVDRVF---CKCAERLVEKLEPVALSGEAVNMEA 156
Query: 186 KDYCARYTTDVIGSTAFGIEINSLENPDSEFRQVSLLVMKPSVLQMLKAVLSELIPLIKY 245
K ++ T DVIG + F +SL DS Q +K + + ++L+P K
Sbjct: 157 K--FSQLTLDVIGLSVFNYNFDSLTT-DSPVIQAVYTALKEAETRS-----TDLLPYWKV 208
Query: 246 LNLKIFDPR----------ISQFFSNLVK--TNLSYREKNNIKRDDFLN----IMMQLQI 289
L PR I + +LV + E I+ ++++N +++ +
Sbjct: 209 DFLCKISPRQIKAEKAVTVIRETVEDLVDKCKEIVEAEGEVIEGEEYVNDSDPSVLRFLL 268
Query: 290 AQRGKTLSPDDVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQE-- 347
A R + S V++ DD+++ G+ET+ SVLT+ LY L++NP+ K ++E
Sbjct: 269 ASREEVSS---VQLRDDLLS-----MLVAGHETTGSVLTWTLYLLSKNPEALRKAQEELD 320
Query: 348 -IMATKKKEGELTYEICHKMSYLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLTLDVG 406
++ + TYE ++ YL + E++R+YP P L R + + LP ++ G
Sbjct: 321 RVLQGRPP----TYEDIKELKYLTRCINESMRLYPHPPVLIRRAQVEDVLPG-GYKVNAG 375
Query: 407 TKISIPTFAIHYDPEYYPDPEKFDPERFSPENI---ESRPHYTYLPFGDGPRNCIGMRFG 463
I I + IH PE + E+F PERF + E+ + Y+PF GPR C+G +F
Sbjct: 376 QDIMISVYNIHRSPEVWERAEEFVPERFDLDGPVPNETNTDFRYIPFSGGPRKCVGDQFA 435
Query: 464 TIQFKIGLAQLISNFEFSI 482
++ + LA L+ + +
Sbjct: 436 LLEAIVALAVLLQRLDLEL 454
>gnl|CDD|165828 PLN02183, PLN02183, ferulate 5-hydroxylase.
Length = 516
Score = 103 bits (258), Expect = 2e-23
Identities = 94/432 (21%), Positives = 181/432 (41%), Gaps = 57/432 (13%)
Query: 80 YGGLYHLMTPKL---MVTDPELYKYILIKDFDHFVDR--GIGESDAKRDPIEGHLFGSKG 134
YGGL+H+ L V+ PE+ + +L F +R I S D + F G
Sbjct: 68 YGGLFHMRMGYLHMVAVSSPEVARQVLQVQDSVFSNRPANIAISYLTYDRAD-MAFAHYG 126
Query: 135 EYWKRLRNKLSPTFTSGKIKYMFPLIKKCSDQLITTIRKQIGESKQMSLEVKDYCARYTT 194
+W+++R S K + ++ D ++ ++ IG+ + + + T
Sbjct: 127 PFWRQMRKLCVMKLFSRKRAESWASVRDEVDSMVRSVSSNIGKP----VNIGELIFTLTR 182
Query: 195 DVIGSTAFGIEINSLENPDSEFRQVSLLVMKPSVLQMLKAV-----LSELIPLIKYLNLK 249
++ AFG +S EF +LQ + +++ IP + +++ +
Sbjct: 183 NITYRAAFG---SSSNEGQDEFI---------KILQEFSKLFGAFNVADFIPWLGWIDPQ 230
Query: 250 IFDPRISQ-------FFSNLVKTNLSYREKNNIKRD------DFLNIMMQLQIAQRGKTL 296
+ R+ + F +++ ++ R+ N D D ++ ++ +
Sbjct: 231 GLNKRLVKARKSLDGFIDDIIDDHIQKRKNQNADNDSEEAETDMVDDLLAFYSEEAKVNE 290
Query: 297 SPD---DVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKK 353
S D +++T D I A FGG ET +S + + + EL ++P+ +++QE+
Sbjct: 291 SDDLQNSIKLTRDNIKAIIMDVMFGGTETVASAIEWAMAELMKSPEDLKRVQQELADVVG 350
Query: 354 KEGELTYEICHKMSYLDKVTKEALRMYPSLPQL-----DRISVKKYKLPNTDLTLDVGTK 408
+ K++YL KE LR++P +P L + V Y +P ++
Sbjct: 351 LNRRVEESDLEKLTYLKCTLKETLRLHPPIPLLLHETAEDAEVAGYFIPKR-------SR 403
Query: 409 ISIPTFAIHYDPEYYPDPEKFDPERFSPENIES--RPHYTYLPFGDGPRNCIGMRFGTIQ 466
+ I +AI D + DP+ F P RF + H+ ++PFG G R+C GM+ G
Sbjct: 404 VMINAWAIGRDKNSWEDPDTFKPSRFLKPGVPDFKGSHFEFIPFGSGRRSCPGMQLGLYA 463
Query: 467 FKIGLAQLISNF 478
+ +A L+ F
Sbjct: 464 LDLAVAHLLHCF 475
>gnl|CDD|177847 PLN02196, PLN02196, abscisic acid 8'-hydroxylase.
Length = 463
Score = 101 bits (254), Expect = 3e-23
Identities = 103/426 (24%), Positives = 177/426 (41%), Gaps = 62/426 (14%)
Query: 80 YGGLYH---LMTPKLMVTDPELYKYILIKDFDHFVDRGIGESDAKRDPIEGHLFGSKGEY 136
YG ++ L P +M++ PE K++L+ F + + +R + +F +G+Y
Sbjct: 68 YGSVFKTHVLGCPCVMISSPEAAKFVLVTKSHLF--KPTFPASKERMLGKQAIFFHQGDY 125
Query: 137 WKRLRNKLSPTFTSGKIKYMFPLIKKCSDQLITTIRKQIGESKQMSLEVKDYCARYTTDV 196
+LR + F I+ M P I+ + + ++ G E+K Y
Sbjct: 126 HAKLRKLVLRAFMPDAIRNMVPDIESIAQE---SLNSWEGTQINTYQEMKTY-------- 174
Query: 197 IGSTAFGIEINSLENPDSEFRQVSLLVMKPSVLQMLKAVLSELIPLIKYLNLKIFDPR-- 254
F + + S+ D + L K + K S I L L K R
Sbjct: 175 ----TFNVALLSIFGKDEVLYREDL---KRCYYILEKGYNSMPINLPGTLFHKSMKARKE 227
Query: 255 ISQFFSNLVKTNLSYREKNNIKRDDFLNIMMQLQIAQRGKTLSPDDVEMTDDVITAQSFV 314
++Q + + LS R +N +D L M D +TD+ I
Sbjct: 228 LAQILAKI----LSKRRQNGSSHNDLLGSFMG------------DKEGLTDEQIADNIIG 271
Query: 315 FFFGGYETSSSVLTFCLYELARNPDIQSKLRQE---IMATKKKEGELTYEICHKMSYLDK 371
F +T++SVLT+ L LA NP + + +E I K++ LT+E KM +
Sbjct: 272 VIFAARDTTASVLTWILKYLAENPSVLEAVTEEQMAIRKDKEEGESLTWEDTKKMPLTSR 331
Query: 372 VTKEALRMYPSLPQLDRISVKK-----YKLPNTDLTLDVGTKISIPTFA-IHYDPEYYPD 425
V +E LR+ L R +V+ Y +P G K+ +P F IH+ + + D
Sbjct: 332 VIQETLRVASILSFTFREAVEDVEYEGYLIPK-------GWKV-LPLFRNIHHSADIFSD 383
Query: 426 PEKFDPERFSPENIESRPHYTYLPFGDGPRNCIGMRFGTIQFKIGLAQLISNFEFSIDSA 485
P KFDP RF + +P+ T++PFG+G +C G ++ + + L + + +SI
Sbjct: 384 PGKFDPSRFE---VAPKPN-TFMPFGNGTHSCPGNELAKLEISVLIHHLTTKYRWSIVGT 439
Query: 486 NATFEY 491
+ +Y
Sbjct: 440 SNGIQY 445
>gnl|CDD|215371 PLN02687, PLN02687, flavonoid 3'-monooxygenase.
Length = 517
Score = 97.6 bits (243), Expect = 1e-21
Identities = 70/288 (24%), Positives = 139/288 (48%), Gaps = 36/288 (12%)
Query: 215 EFRQVSLLVMKPSVLQMLKAVLS--ELIPLIKYLNL-------KIFDPRISQFFSNLVKT 265
EF+++ + +M+ L V + + +P +++L+L K R + +++
Sbjct: 205 EFKEMVVELMQ------LAGVFNVGDFVPALRWLDLQGVVGKMKRLHRRFDAMMNGIIEE 258
Query: 266 NLSYREKNNIKRDDFLNIMMQLQIAQRGKTLSPDDVEMTDDVITAQSFVFFFGGYETSSS 325
+ + + + + D L+ ++ L+ R + + +TD I A F G +T+SS
Sbjct: 259 HKAAGQTGSEEHKDLLSTLLALK---REQQADGEGGRITDTEIKALLLNLFTAGTDTTSS 315
Query: 326 VLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSYLDKVTKEALRMYPSLP- 384
+ + + EL R+PDI K ++E+ A ++ ++ +++YL V KE R++PS P
Sbjct: 316 TVEWAIAELIRHPDILKKAQEELDAVVGRDRLVSESDLPQLTYLQAVIKETFRLHPSTPL 375
Query: 385 QLDRIS-----VKKYKLPNTDLTLDVGTKISIPTFAIHYDPEYYPDPEKFDPERFSP--- 436
L R++ + Y +P G + + +AI DPE +PDP +F P+RF P
Sbjct: 376 SLPRMAAEECEINGYHIPK-------GATLLVNVWAIARDPEQWPDPLEFRPDRFLPGGE 428
Query: 437 -ENIESR-PHYTYLPFGDGPRNCIGMRFGTIQFKIGLAQLISNFEFSI 482
++ + + +PFG G R C G+ +G + A L+ F++ +
Sbjct: 429 HAGVDVKGSDFELIPFGAGRRICAGLSWGLRMVTLLTATLVHAFDWEL 476
>gnl|CDD|177725 PLN00110, PLN00110, flavonoid 3',5'-hydroxylase (F3'5'H);
Provisional.
Length = 504
Score = 97.2 bits (242), Expect = 2e-21
Identities = 67/214 (31%), Positives = 108/214 (50%), Gaps = 24/214 (11%)
Query: 279 DFLNIMMQLQIAQRGKTLSPDDVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNP 338
DFL+++M Q G+ L+ +T+ I A F G +TSSSV+ + L E+ +NP
Sbjct: 268 DFLDVVMANQENSTGEKLT-----LTN--IKALLLNLFTAGTDTSSSVIEWSLAEMLKNP 320
Query: 339 DIQSKLRQEIMATKKKEGELTYEICHKMSYLDKVTKEALRMYPSLP-QLDRIS-----VK 392
I + +E+ + L K+ YL + KE+ R +PS P L R+S V
Sbjct: 321 SILKRAHEEMDQVIGRNRRLVESDLPKLPYLQAICKESFRKHPSTPLNLPRVSTQACEVN 380
Query: 393 KYKLPNTDLTLDVGTKISIPTFAIHYDPEYYPDPEKFDPERFSPE---NIESRPH-YTYL 448
Y +P T++S+ +AI DP+ + +PE+F PERF E I+ R + + +
Sbjct: 381 GYYIPK-------NTRLSVNIWAIGRDPDVWENPEEFRPERFLSEKNAKIDPRGNDFELI 433
Query: 449 PFGDGPRNCIGMRFGTIQFKIGLAQLISNFEFSI 482
PFG G R C G R G + + L L+ +F++ +
Sbjct: 434 PFGAGRRICAGTRMGIVLVEYILGTLVHSFDWKL 467
>gnl|CDD|177826 PLN02169, PLN02169, fatty acid (omega-1)-hydroxylase/midchain
alkane hydroxylase.
Length = 500
Score = 90.8 bits (225), Expect = 2e-19
Identities = 67/226 (29%), Positives = 106/226 (46%), Gaps = 22/226 (9%)
Query: 267 LSYREKNNIKR-------DDFLNIMMQLQIAQRGKTLSPDDVEMTDDVITAQSFVFFFGG 319
+S R K I R D L M + ++ K L P + DVI F G
Sbjct: 259 ISSRRKEEISRAETEPYSKDALTYYMNVDTSKY-KLLKPKKDKFIRDVI----FSLVLAG 313
Query: 320 YETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSYLDKVTKEALRM 379
+T+SS LT+ + L+++P + +K+R EI TK +L K+ YL E++R+
Sbjct: 314 RDTTSSALTWFFWLLSKHPQVMAKIRHEI-NTKFDNEDL-----EKLVYLHAALSESMRL 367
Query: 380 YPSLPQLDRISVKKYKLPNTDLTLDVGTKISIPTFAI-HYDPEYYPDPEKFDPERFSPEN 438
YP LP + K LP+ +D +KI I +A+ + D F PER+ +N
Sbjct: 368 YPPLPFNHKAPAKPDVLPSGH-KVDAESKIVICIYALGRMRSVWGEDALDFKPERWISDN 426
Query: 439 --IESRPHYTYLPFGDGPRNCIGMRFGTIQFKIGLAQLISNFEFSI 482
+ P Y ++ F GPR C+G +Q KI ++I N++F +
Sbjct: 427 GGLRHEPSYKFMAFNSGPRTCLGKHLALLQMKIVALEIIKNYDFKV 472
>gnl|CDD|215354 PLN02655, PLN02655, ent-kaurene oxidase.
Length = 466
Score = 90.6 bits (225), Expect = 2e-19
Identities = 69/272 (25%), Positives = 121/272 (44%), Gaps = 42/272 (15%)
Query: 228 VLQMLKAVLS----ELIPLIKYLNLKIFDPRISQ--FFSNLVKTNLSYREKNNI----KR 277
V M+ + + P + ++ K F+ R+ F V L ++K I +R
Sbjct: 185 VHDMMMCAIEVDWRDFFPYLSWIPNKSFETRVQTTEFRRTAVMKALIKQQKKRIARGEER 244
Query: 278 DDFLNIMMQLQIAQRGKTLSPDDVEMTDDVITAQSFVFFFGGYETSSSVLT---FCLYEL 334
D +L+ ++ L+ + + M + + + E + + L + +YEL
Sbjct: 245 DCYLDFLLS-----EATHLTDEQLMM----LVWEPII------EAADTTLVTTEWAMYEL 289
Query: 335 ARNPDIQSKLRQEIMATKKKEGELTYEICHKMSYLDKVTKEALRMYPSLPQL------DR 388
A+NPD Q +L +EI E +T E + YL+ V E LR Y +P L +
Sbjct: 290 AKNPDKQERLYREIREVCGDE-RVTEEDLPNLPYLNAVFHETLRKYSPVPLLPPRFVHED 348
Query: 389 ISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPEYYPDPEKFDPERFSPENIESRPHYTYL 448
++ Y +P GT+I+I + + D + + +PE++DPERF E ES Y +
Sbjct: 349 TTLGGYDIP-------AGTQIAINIYGCNMDKKRWENPEEWDPERFLGEKYESADMYKTM 401
Query: 449 PFGDGPRNCIGMRFGTIQFKIGLAQLISNFEF 480
FG G R C G + + +A+L+ FE+
Sbjct: 402 AFGAGKRVCAGSLQAMLIACMAIARLVQEFEW 433
>gnl|CDD|178550 PLN02966, PLN02966, cytochrome P450 83A1.
Length = 502
Score = 90.6 bits (224), Expect = 2e-19
Identities = 89/387 (22%), Positives = 176/387 (45%), Gaps = 39/387 (10%)
Query: 120 AKRDPIEGHLFGSKGE----------YWKRLRNK-LSPTFTSGKIKYMFPLIKKCSDQLI 168
A R P GH F S G Y++ +R ++ F+ ++ + ++ + +++
Sbjct: 96 ADRPPHRGHEFISYGRRDMALNHYTPYYREIRKMGMNHLFSPTRVATFKHVREEEARRMM 155
Query: 169 TTIRKQIGESKQMSLEVKDYCARYTTDVIGSTAFGIEINSLENPDSEFRQVSLLVMKPSV 228
I K +S+ +++ + +T V+ AFG + N E+ + R + +L SV
Sbjct: 156 DKINKAADKSE--VVDISELMLTFTNSVVCRQAFGKKYN--EDGEEMKRFIKILYGTQSV 211
Query: 229 LQMLKAVLSELIPLIKYLN--------LKIFDPRISQFFSNLVKTNLSYREKNNIKRDDF 280
L K S+ P +L+ +K R + +V L + + + +
Sbjct: 212 LG--KIFFSDFFPYCGFLDDLSGLTAYMKECFERQDTYIQEVVNETLDPK-RVKPETESM 268
Query: 281 LNIMMQLQIAQRGKTLSPDDVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDI 340
++++M++ Q P E T D + A G +T+++ + + + L + P +
Sbjct: 269 IDLLMEIYKEQ------PFASEFTVDNVKAVILDIVVAGTDTAAAAVVWGMTYLMKYPQV 322
Query: 341 QSKLRQEIMATKKKEGE--LTYEICHKMSYLDKVTKEALRMYPSLPQL-DRISVKKYKLP 397
K + E+ K++G +T + + Y + KE LR+ P +P L R ++ K+
Sbjct: 323 LKKAQAEVREYMKEKGSTFVTEDDVKNLPYFRALVKETLRIEPVIPLLIPRACIQDTKIA 382
Query: 398 NTDLTLDVGTKISIPTFAIHYD-PEYYPDPEKFDPERFSPENIESR-PHYTYLPFGDGPR 455
D+ GT +++ +A+ D E+ P+P++F PERF + ++ + Y ++PFG G R
Sbjct: 383 GYDIP--AGTTVNVNAWAVSRDEKEWGPNPDEFRPERFLEKEVDFKGTDYEFIPFGSGRR 440
Query: 456 NCIGMRFGTIQFKIGLAQLISNFEFSI 482
C GMR G ++ A L+ NF F +
Sbjct: 441 MCPGMRLGAAMLEVPYANLLLNFNFKL 467
>gnl|CDD|215171 PLN02302, PLN02302, ent-kaurenoic acid oxidase.
Length = 490
Score = 90.2 bits (224), Expect = 3e-19
Identities = 61/221 (27%), Positives = 105/221 (47%), Gaps = 29/221 (13%)
Query: 270 REKNNI--KRDDFLNIMMQLQIAQRGKTLSPDDVEMTDDVITAQSFVFFFGGYETSSSVL 327
K NI ++ D L++++ + + G+ L DD E+ D ++ ++ G+E+S +
Sbjct: 256 SRKQNISPRKKDMLDLLLDAE-DENGRKL--DDEEIIDLLL-----MYLNAGHESSGHLT 307
Query: 328 TFCLYELARNPDIQSKLR--QEIMATKKKEGE--LTYEICHKMSYLDKVTKEALRMYPSL 383
+ L +P++ K + QE +A K+ G+ LT + KM YL +V E LR+
Sbjct: 308 MWATIFLQEHPEVLQKAKAEQEEIAKKRPPGQKGLTLKDVRKMEYLSQVIDETLRLINIS 367
Query: 384 PQLDR-----ISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPEYYPDPEKFDPERFSPEN 438
+ R + V Y +P G K+ +H DPE YP+P++FDP R+ +N
Sbjct: 368 LTVFREAKTDVEVNGYTIPK-------GWKVLAWFRQVHMDPEVYPNPKEFDPSRW--DN 418
Query: 439 IESRPHYTYLPFGDGPRNCIGMRFGTIQFKIGLAQLISNFE 479
+ T+LPFG G R C G ++ I L + +
Sbjct: 419 YTPKAG-TFLPFGLGSRLCPGNDLAKLEISIFLHHFLLGYR 458
>gnl|CDD|215086 PLN00168, PLN00168, Cytochrome P450; Provisional.
Length = 519
Score = 89.2 bits (221), Expect = 5e-19
Identities = 58/195 (29%), Positives = 87/195 (44%), Gaps = 20/195 (10%)
Query: 299 DDVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMA-TKKKEGE 357
D +TDD I F G +T+S+ L + + EL +NP IQSKL EI A T + E
Sbjct: 298 GDRALTDDEIVNLCSEFLNAGTDTTSTALQWIMAELVKNPSIQSKLHDEIKAKTGDDQEE 357
Query: 358 LTYEICHKMSYLDKVTKEALRMYPS----LPQ--LDRISVKKYKLPNTDLTLDVGTKISI 411
++ E HKM YL V E LR +P LP + + V Y +P G ++
Sbjct: 358 VSEEDVHKMPYLKAVVLEGLRKHPPAHFVLPHKAAEDMEVGGYLIPK-------GATVNF 410
Query: 412 PTFAIHYDPEYYPDPEKFDPERFSPE------NIESRPHYTYLPFGDGPRNCIGMRFGTI 465
+ D + P +F PERF ++ +PFG G R C G+ +
Sbjct: 411 MVAEMGRDEREWERPMEFVPERFLAGGDGEGVDVTGSREIRMMPFGVGRRICAGLGIAML 470
Query: 466 QFKIGLAQLISNFEF 480
+ +A ++ FE+
Sbjct: 471 HLEYFVANMVREFEW 485
>gnl|CDD|215583 PLN03112, PLN03112, cytochrome P450 family protein; Provisional.
Length = 514
Score = 88.0 bits (218), Expect = 1e-18
Identities = 109/527 (20%), Positives = 189/527 (35%), Gaps = 115/527 (21%)
Query: 16 CSLPLIFLFIKSIFNYRYWK-NKNVFYFSPTFPFGNYGAGFLSRITF-----HQMHCEFY 69
S L LF IFN W+ S P G + + H+
Sbjct: 2 DSFLLSLLFSVLIFNVLIWRWLNASMRKSLRLPPGPPRWPIVGNLLQLGPLPHRDLASLC 61
Query: 70 NKIKYDLKLPYGGLYHL---MTPKLMVTDPELYKYILIKDFDHFVDR---------GIGE 117
K YG L +L + DPEL + IL++ D F R G
Sbjct: 62 KK--------YGPLVYLRLGSVDAITTDDPELIREILLRQDDVFASRPRTLAAVHLAYGC 113
Query: 118 SDAKRDPIEGHLFGSKGEYWKRLRNKLSPTFTSGKIKYMFPLIKKCSDQLITTIR----- 172
D P+ G +WKR+R + C + L+TT R
Sbjct: 114 GDVALAPL--------GPHWKRMR-------------------RICMEHLLTTKRLESFA 146
Query: 173 -KQIGESKQMSLEVKDYCARYTT-------DVIGSTAFGIEINSLENPDSEFRQVSLLVM 224
+ E++ + ++D T +V+G +N++ +
Sbjct: 147 KHRAEEARHL---IQDVWEAAQTGKPVNLREVLG----AFSMNNVTRMLLGKQYFGAESA 199
Query: 225 KPSVLQMLKAVLSELIPLIKYLNLKIFDP-------------------RISQFFSNLVKT 265
P + EL L+ + L + P R+ +F ++
Sbjct: 200 GPKEAMEFMHITHELFRLLGVIYLGDYLPAWRWLDPYGCEKKMREVEKRVDEFHDKIIDE 259
Query: 266 NLSYRE--KNNIKRDDFLNIMMQLQIAQRGKTLSPDDVE---MTDDVITAQSFVFFFGGY 320
+ R K DF+++++ L + GK DDVE + D+I A +
Sbjct: 260 HRRARSGKLPGGKDMDFVDVLLSLP-GENGKE-HMDDVEIKALMQDMIAAAT-------- 309
Query: 321 ETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSYLDKVTKEALRMY 380
+TS+ + + E+ +NP + K+++E+ + + + ++YL V +E RM+
Sbjct: 310 DTSAVTNEWAMAEVIKNPRVLRKIQEELDSVVGRNRMVQESDLVHLNYLRCVVRETFRMH 369
Query: 381 PSLPQL-DRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPEYYPDPEKFDPERFSPEN- 438
P+ P L S++ + + T++ I T + + + + D E+F PER P
Sbjct: 370 PAGPFLIPHESLRATTINGYYIP--AKTRVFINTHGLGRNTKIWDDVEEFRPERHWPAEG 427
Query: 439 ----IESRPHYTYLPFGDGPRNCIGMRFGTIQFKIGLAQLISNFEFS 481
I P + LPF G R C G G + LA+L F++S
Sbjct: 428 SRVEISHGPDFKILPFSAGKRKCPGAPLGVTMVLMALARLFHCFDWS 474
>gnl|CDD|215221 PLN02394, PLN02394, trans-cinnamate 4-monooxygenase.
Length = 503
Score = 85.2 bits (211), Expect = 1e-17
Identities = 50/151 (33%), Positives = 81/151 (53%), Gaps = 6/151 (3%)
Query: 333 ELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSYLDKVTKEALRMYPSLPQL-DRISV 391
EL +P+IQ KLR E+ ++T HK+ YL V KE LR++ ++P L +++
Sbjct: 319 ELVNHPEIQKKLRDELDTVLGPGNQVTEPDTHKLPYLQAVVKETLRLHMAIPLLVPHMNL 378
Query: 392 KKYKLPNTDLTLDVGTKISIPTFAIHYDPEYYPDPEKFDPERFSPENIESRPH---YTYL 448
+ KL D+ +KI + + + +PE + +PE+F PERF E + + + +L
Sbjct: 379 EDAKLGGYDIP--AESKILVNAWWLANNPELWKNPEEFRPERFLEEEAKVEANGNDFRFL 436
Query: 449 PFGDGPRNCIGMRFGTIQFKIGLAQLISNFE 479
PFG G R+C G+ I L +L+ NFE
Sbjct: 437 PFGVGRRSCPGIILALPILGIVLGRLVQNFE 467
>gnl|CDD|178773 PLN03234, PLN03234, cytochrome P450 83B1; Provisional.
Length = 499
Score = 83.2 bits (205), Expect = 6e-17
Identities = 87/367 (23%), Positives = 165/367 (44%), Gaps = 29/367 (7%)
Query: 130 FGSKGEYWKRLRNK-LSPTFTSGKIKYMFPLIKKCSDQLITTIRKQIGESKQMSLEVKDY 188
FG Y++ +R + F+ ++ P+ ++ +++ I K +S ++++ +
Sbjct: 115 FGQYTAYYREMRKMCMVNLFSPNRVASFRPVREEECQRMMDKIYKAADQSG--TVDLSEL 172
Query: 189 CARYTTDVIGSTAFGIEINSLENPDSEFRQVSLLVMKPSVLQMLKAVLSELIPLIKYL-N 247
+T V+ AFG N F + +L ++L L S+L P +L N
Sbjct: 173 LLSFTNCVVCRQAFGKRYNEYGTEMKRF--IDILYETQALLGTL--FFSDLFPYFGFLDN 228
Query: 248 LKIFDPRISQFFSNLVKTNLS-----YREKNNIKRD--DFLNIMMQLQIAQRGKTLSPDD 300
L R+ + F L T L + N K++ F++++MQ+ Q P
Sbjct: 229 LTGLSARLKKAFKEL-DTYLQELLDETLDPNRPKQETESFIDLLMQIYKDQ------PFS 281
Query: 301 VEMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTY 360
++ T + + A G +T+++V+ + + L + P+ K + E+ +G ++
Sbjct: 282 IKFTHENVKAMILDIVVPGTDTAAAVVVWAMTYLIKYPEAMKKAQDEVRNVIGDKGYVSE 341
Query: 361 EICHKMSYLDKVTKEALRMYPSLP-QLDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYD 419
E + YL V KE+LR+ P +P L R ++ K+ D+ T I + +A+ D
Sbjct: 342 EDIPNLPYLKAVIKESLRLEPVIPILLHRETIADAKIGGYDIP--AKTIIQVNAWAVSRD 399
Query: 420 PEYYPD-PEKFDPERFSPEN--IESRPH-YTYLPFGDGPRNCIGMRFGTIQFKIGLAQLI 475
+ D P +F PERF E+ ++ + + LPFG G R C M G +I A L+
Sbjct: 400 TAAWGDNPNEFIPERFMKEHKGVDFKGQDFELLPFGSGRRMCPAMHLGIAMVEIPFANLL 459
Query: 476 SNFEFSI 482
F++S+
Sbjct: 460 YKFDWSL 466
>gnl|CDD|215627 PLN03195, PLN03195, fatty acid omega-hydroxylase; Provisional.
Length = 516
Score = 80.6 bits (199), Expect = 4e-16
Identities = 112/484 (23%), Positives = 203/484 (41%), Gaps = 90/484 (18%)
Query: 52 GAGFLSRITFHQMH---CEFYNKIK-YDLKLPYGGLYHLMTPKLMVTDPELYKYILIKDF 107
GA + +MH E+ +K + +K+P+ T + DP +++L +F
Sbjct: 42 GAALEQLKNYDRMHDWLVEYLSKDRTVVVKMPF-------TTYTYIADPVNVEHVLKTNF 94
Query: 108 DHFVDRGIGESDAKRDPIEGHL----FGSKGEYWKRLRNKLSPTFTSGKIKYMFPLIKKC 163
++ +G + +E L F GE W++ R S F S ++ ++ +
Sbjct: 95 ANY-PKG----EVYHSYMEVLLGDGIFNVDGELWRKQRKTASFEFASKNLRDFSTVVFRE 149
Query: 164 SDQLITTIRKQIGESKQMSLEVKDYCARYTTDVIGSTAFGIEINSL--ENPDSEFRQ--- 218
+++I Q + Q ++++D R T D I FG+EI +L P++ F Q
Sbjct: 150 YSLKLSSILSQASFANQ-VVDMQDLFMRMTLDSICKVGFGVEIGTLSPSLPENPFAQAFD 208
Query: 219 -----VSLLVMKP--SVLQMLK----AVLSELIPLIKYLNLKIFDPRISQFFSNLVKTNL 267
V+L + P + + L A+LS+ I ++ + R ++
Sbjct: 209 TANIIVTLRFIDPLWKLKKFLNIGSEALLSKSIKVVDDFTYSVIRRRKAEM--------D 260
Query: 268 SYREKNNIKRDDFLNIMMQLQIAQRGKTLSPDDVEMTDDVITAQSFVFFFGGYETSSSVL 327
R+ + D L+ ++L G+ PD TD + F G +T+++ L
Sbjct: 261 EARKSGKKVKHDILSRFIEL-----GE--DPDS-NFTDKSLRDIVLNFVIAGRDTTATTL 312
Query: 328 TFCLYELARNPDIQSKLRQEIMATKKKEGE--------------------LTYEICHKMS 367
++ +Y + NP + KL E+ A +K+ + LTY+ K+
Sbjct: 313 SWFVYMIMMNPHVAEKLYSELKALEKERAKEEDPEDSQSFNQRVTQFAGLLTYDSLGKLQ 372
Query: 368 YLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDP------E 421
YL V E LR+YP++PQ + ++ LP+ GTK+ + Y P E
Sbjct: 373 YLHAVITETLRLYPAVPQDPKGILEDDVLPD-------GTKVKAGGM-VTYVPYSMGRME 424
Query: 422 YY--PDPEKFDPERFSPENI-ESRPHYTYLPFGDGPRNCIGMRFGTIQFKIGLAQLISNF 478
Y PD F PER+ + + ++ + + F GPR C+G +Q K+ LA L F
Sbjct: 425 YNWGPDAASFKPERWIKDGVFQNASPFKFTAFQAGPRICLGKDSAYLQMKMALALLCRFF 484
Query: 479 EFSI 482
+F +
Sbjct: 485 KFQL 488
>gnl|CDD|166628 PLN02987, PLN02987, Cytochrome P450, family 90, subfamily A.
Length = 472
Score = 78.5 bits (193), Expect = 2e-15
Identities = 58/236 (24%), Positives = 98/236 (41%), Gaps = 27/236 (11%)
Query: 254 RISQFFSNLVKTNLSYREKNNIKRDDFLNIMMQLQIAQRGKTLSPDDVEMTDDVITAQSF 313
++++ + +V E+ K+ D L L+ DD +D+ I
Sbjct: 226 KVAEALTLVVMKRRKEEEEGAEKKKDML-----------AALLASDD-GFSDEEIVDFLV 273
Query: 314 VFFFGGYETSSSVLTFCLYELARNPDIQSKLRQE---IMATKKKEGELTYEICHKMSYLD 370
GYET+S+++T + L P ++L++E I A K L + M +
Sbjct: 274 ALLVAGYETTSTIMTLAVKFLTETPLALAQLKEEHEKIRAMKSDSYSLEWSDYKSMPFTQ 333
Query: 371 KVTKEALRMYPSLPQLDR-----ISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPEYYPD 425
V E LR+ + + R I VK Y +P G K+ A+H D EY+ D
Sbjct: 334 CVVNETLRVANIIGGIFRRAMTDIEVKGYTIPK-------GWKVFASFRAVHLDHEYFKD 386
Query: 426 PEKFDPERFSPENIESRPHYTYLPFGDGPRNCIGMRFGTIQFKIGLAQLISNFEFS 481
F+P R+ + + P + PFG GPR C G + + L +L++ F +
Sbjct: 387 ARTFNPWRWQSNSGTTVPSNVFTPFGGGPRLCPGYELARVALSVFLHRLVTRFSWV 442
>gnl|CDD|215276 PLN02500, PLN02500, cytochrome P450 90B1.
Length = 490
Score = 73.7 bits (181), Expect = 6e-14
Identities = 53/187 (28%), Positives = 84/187 (44%), Gaps = 14/187 (7%)
Query: 317 FGGYETSSSVLTFCLYELARNPDIQSKLRQE---IMATKKKEG--ELTYEICHKMSYLDK 371
F G+ETSS + ++ L P +LR+E I KK+ G EL +E KM +
Sbjct: 289 FAGHETSSVAIALAIFFLQGCPKAVQELREEHLEIARAKKQSGESELNWEDYKKMEFTQC 348
Query: 372 VTKEALRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPEYYPDPEKFDP 431
V E LR+ + L R ++K + D+ G K+ A+H D Y P+ F+P
Sbjct: 349 VINETLRLGNVVRFLHRKALKDVRYKGYDIP--SGWKVLPVIAAVHLDSSLYDQPQLFNP 406
Query: 432 ERFSPEN-------IESRPHYTYLPFGDGPRNCIGMRFGTIQFKIGLAQLISNFEFSIDS 484
R+ N S ++PFG GPR C G ++ + + L+ NF + +
Sbjct: 407 WRWQQNNNRGGSSGSSSATTNNFMPFGGGPRLCAGSELAKLEMAVFIHHLVLNFNWELAE 466
Query: 485 ANATFEY 491
A+ F +
Sbjct: 467 ADQAFAF 473
>gnl|CDD|178373 PLN02774, PLN02774, brassinosteroid-6-oxidase.
Length = 463
Score = 71.3 bits (175), Expect = 3e-13
Identities = 46/167 (27%), Positives = 77/167 (46%), Gaps = 7/167 (4%)
Query: 303 MTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQE---IMATKKKEGELT 359
+TD+ I Q + GYET S+ + L +P +LR+E I K+ E +
Sbjct: 260 LTDEEIIDQIITILYSGYETVSTTSMMAVKYLHDHPKALQELRKEHLAIRERKRPEDPID 319
Query: 360 YEICHKMSYLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYD 419
+ M + V E R+ + + R + + +L + G +I + T I+YD
Sbjct: 320 WNDYKSMRFTRAVIFETSRLATIVNGVLRKTTQDMEL--NGYVIPKGWRIYVYTREINYD 377
Query: 420 PEYYPDPEKFDPERFSPENIESRPHYTYLPFGDGPRNCIGMRFGTIQ 466
P YPDP F+P R+ +++ES + + FG G R C G G ++
Sbjct: 378 PFLYPDPMTFNPWRWLDKSLESHNY--FFLFGGGTRLCPGKELGIVE 422
>gnl|CDD|166612 PLN02971, PLN02971, tryptophan N-hydroxylase.
Length = 543
Score = 66.6 bits (162), Expect = 1e-11
Identities = 53/237 (22%), Positives = 107/237 (45%), Gaps = 25/237 (10%)
Query: 269 YREKNNIKRDDFLNIMMQLQIAQRGKTLSPDDVEMT-DDVITAQSFVFFFGGYETSSSVL 327
+RE + +DFL+I + ++ L+ D+++ T +++ A + S+ +
Sbjct: 296 WREGKRTQIEDFLDIFISIKDEAGQPLLTADEIKPTIKELVMAAP--------DNPSNAV 347
Query: 328 TFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSYLDKVTKEALRMYP----SL 383
+ + E+ P+I K +EI KE + K++Y+ + +EA R++P +L
Sbjct: 348 EWAMAEMINKPEILHKAMEEIDRVVGKERFVQESDIPKLNYVKAIIREAFRLHPVAAFNL 407
Query: 384 PQ--LDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPEYYPDPEKFDPERFSPENIE- 440
P L +V Y +P G+++ + + + +P+ + DP F PER E E
Sbjct: 408 PHVALSDTTVAGYHIPK-------GSQVLLSRYGLGRNPKVWSDPLSFKPERHLNECSEV 460
Query: 441 --SRPHYTYLPFGDGPRNCIGMRFGTIQFKIGLAQLISNFEFSIDSANATFEYLKGS 495
+ ++ F G R C GT + LA+L+ F++ + + E ++ S
Sbjct: 461 TLTENDLRFISFSTGKRGCAAPALGTAITTMMLARLLQGFKWKLAGSETRVELMESS 517
>gnl|CDD|215235 PLN02426, PLN02426, cytochrome P450, family 94, subfamily C
protein.
Length = 502
Score = 63.9 bits (156), Expect = 8e-11
Identities = 101/414 (24%), Positives = 172/414 (41%), Gaps = 63/414 (15%)
Query: 95 DPELYKYILIKDFDHFVDRGIGESDAKRDPIEGHLFGSKGEYWKRLRNKLSPTFTSGKIK 154
+PE +Y+L FD++ +G S D + +F G+ W+ R S S I+
Sbjct: 90 NPENVEYMLKTRFDNY-PKGKPFSAILGDLLGRGIFNVDGDSWRFQRKMASLELGSVSIR 148
Query: 155 -YMFPLIK-KCSDQLITTIRKQIGESKQMSLEVKDYCARYTTDVIGSTAFGIEINSLEN- 211
Y F ++ + +L+ + + + L+++D R++ D I +FG++ LE
Sbjct: 149 SYAFEIVASEIESRLLPLLSSAADDGEGAVLDLQDVFRRFSFDNICKFSFGLDPGCLELS 208
Query: 212 -PDSEFRQVSLLVMKPSVLQMLKAVLSELIPLIKYLNLKIFDPRISQFFSNLVKTNLSYR 270
P SEF K S S L+ IK L L I R +
Sbjct: 209 LPISEFADAFDTASKLSA--ERAMAASPLLWKIKRL-LNIGSER---------------K 250
Query: 271 EKNNIKRDDFLNIMMQLQIAQRGKT--------LS------PDDVEMTDDVITAQSFVFF 316
K IK ++ + I QR K LS DD + D V++ F
Sbjct: 251 LKEAIK---LVDELAAEVIRQRRKLGFSASKDLLSRFMASINDDKYLRDIVVS-----FL 302
Query: 317 FGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGEL-TYEICHKMSYLDKVTKE 375
G +T +S LT + L+++P++ S +R+E E ++E +M YL E
Sbjct: 303 LAGRDTVASALTSFFWLLSKHPEVASAIREEADRVMGPNQEAASFEEMKEMHYLHAALYE 362
Query: 376 ALRMYPSLPQLD-RISVKKYKLPNTDLT-LDVGTKISIPTFAIHYDPEYY-PDPEKFDPE 432
++R++P + Q D + + + LP D T + GT+++ +A+ + PD +F PE
Sbjct: 363 SMRLFPPV-QFDSKFAAEDDVLP--DGTFVAKGTRVTYHPYAMGRMERIWGPDCLEFKPE 419
Query: 433 R------FSPENIESRPHYTYLPFGDGPRNCIGMRFGTIQFKIGLAQLISNFEF 480
R F PEN + Y F G R C+G ++ K ++ F+
Sbjct: 420 RWLKNGVFVPENP-----FKYPVFQAGLRVCLGKEMALMEMKSVAVAVVRRFDI 468
>gnl|CDD|178592 PLN03018, PLN03018, homomethionine N-hydroxylase.
Length = 534
Score = 61.6 bits (149), Expect = 4e-10
Identities = 59/254 (23%), Positives = 109/254 (42%), Gaps = 38/254 (14%)
Query: 242 LIKYLNLKIFDPRISQFFSNLVKTNLSYREKN-NIKRDDFLNIMMQLQIAQRGKTLSPDD 300
L++ N I D R+ +REK +D+L+ + L+ Q GK L
Sbjct: 266 LVRSYNNPIIDERVEL-----------WREKGGKAAVEDWLDTFITLK-DQNGKYL---- 309
Query: 301 VEMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTY 360
+T D I AQ F + ++ + + L E+ +NP+I K +E+ K+ +
Sbjct: 310 --VTPDEIKAQCVEFCIAAIDNPANNMEWTLGEMLKNPEILRKALKELDEVVGKDRLVQE 367
Query: 361 EICHKMSYLDKVTKEALRMYPSL----PQLDR--ISVKKYKLPNTDLTLDVGTKISIPTF 414
++YL +E R++PS P + R ++ Y +P G+ I +
Sbjct: 368 SDIPNLNYLKACCRETFRIHPSAHYVPPHVARQDTTLGGYFIPK-------GSHIHVCRP 420
Query: 415 AIHYDPEYYPDPEKFDPER------FSPENIESRPHYTYLPFGDGPRNCIGMRFGTIQFK 468
+ +P+ + DP ++PER + E ++ F G R C+G++ GTI
Sbjct: 421 GLGRNPKIWKDPLVYEPERHLQGDGITKEVTLVETEMRFVSFSTGRRGCVGVKVGTIMMV 480
Query: 469 IGLAQLISNFEFSI 482
+ LA+ + F + +
Sbjct: 481 MMLARFLQGFNWKL 494
>gnl|CDD|215600 PLN03141, PLN03141, 3-epi-6-deoxocathasterone 23-monooxygenase;
Provisional.
Length = 452
Score = 48.2 bits (115), Expect = 6e-06
Identities = 45/190 (23%), Positives = 82/190 (43%), Gaps = 27/190 (14%)
Query: 302 EMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYE 361
E+TDD+I+ G ++ ++T + L+ P +L +E M K+ + +
Sbjct: 246 ELTDDLISDNMIDMMIPGEDSVPVLMTLAVKFLSDCPVALQQLTEENMKLKRLKADTGEP 305
Query: 362 IC----HKMSYLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLTLDVGTK-ISIP---- 412
+ + + V E LRM + + R ++K DV K IP
Sbjct: 306 LYWTDYMSLPFTQNVITETLRMGNIINGVMRKAMK-----------DVEIKGYLIPKGWC 354
Query: 413 TFA----IHYDPEYYPDPEKFDPERFSPENIESRPHYTYLPFGDGPRNCIGMRFGTIQFK 468
A +H D E Y +P +F+P R+ +++ + ++ PFG G R C G+ ++
Sbjct: 355 VLAYFRSVHLDEENYDNPYQFNPWRWQEKDMNNS---SFTPFGGGQRLCPGLDLARLEAS 411
Query: 469 IGLAQLISNF 478
I L L++ F
Sbjct: 412 IFLHHLVTRF 421
>gnl|CDD|215350 PLN02648, PLN02648, allene oxide synthase.
Length = 480
Score = 44.5 bits (106), Expect = 1e-04
Identities = 44/199 (22%), Positives = 70/199 (35%), Gaps = 59/199 (29%)
Query: 254 RISQFFSNLVKTNLSYREKNNIKRDDFLNIMMQLQIAQRGKTLSPDDVEMTDDVITAQSF 313
++ FF L EK I R++ L+ L
Sbjct: 246 KLYDFFRASATEALDLAEKFGISREEALH---NL-------------------------- 276
Query: 314 VFF-----FGGYETSSSVLTFCLYELAR-NPDIQSKLRQEIM-ATKKKEGELTYEICHKM 366
+F FGG+ L + R ++Q++L +E+ A K G +T+ KM
Sbjct: 277 LFVLGFNAFGGF---KIFFPALLKWVGRAGEELQARLAEEVRSAVKAGGGGVTFAALEKM 333
Query: 367 SYLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLTL---DVGTKI--------SIPTFA 415
+ V EALR+ P +P +Y D + D +I P
Sbjct: 334 PLVKSVVYEALRIEPPVPF-------QYGRAREDFVIESHDAAFEIKKGEMLFGYQP-LV 385
Query: 416 IHYDPEYYPDPEKFDPERF 434
DP+ + PE+F P+RF
Sbjct: 386 TR-DPKVFDRPEEFVPDRF 403
>gnl|CDD|216966 pfam02301, HORMA, HORMA domain. The HORMA (for Hop1p, Rev7p and
MAD2) domain has been suggested to recognise chromatin
states that result from DNA adducts, double stranded
breaks or non-attachment to the spindle and acts as an
adaptor that recruits other proteins. MAD2 is a spindle
checkpoint protein which prevents progression of the
cell cycle upon detection of a defect in mitotic spindle
integrity.
Length = 186
Score = 32.7 bits (75), Expect = 0.29
Identities = 19/101 (18%), Positives = 41/101 (40%), Gaps = 11/101 (10%)
Query: 152 KIKYMFPLIKKCSDQLITTIRKQIGES------KQMSLEVKDYCARYTTDVIGSTAFGIE 205
+ KY P++ QLI + K + ++ K++ L + D +V+ F
Sbjct: 35 RKKYNLPVLVSEDPQLIDYLEKGVFDALEKGYLKKLVLVIYDDKDPEKNEVLERYQFDFS 94
Query: 206 INSLENPDSEFRQVSLLVMKPSVLQMLKAVLSELIPLIKYL 246
S+ + Q ++A++ +LI L+++L
Sbjct: 95 YFPSGGNSSDSEKTED-----ETRQEIRALIRQLIALVQFL 130
>gnl|CDD|144972 pfam01576, Myosin_tail_1, Myosin tail. The myosin molecule is a
multi-subunit complex made up of two heavy chains and
four light chains it is a fundamental contractile
protein found in all eukaryote cell types. This family
consists of the coiled-coil myosin heavy chain tail
region. The coiled-coil is composed of the tail from two
molecules of myosin. These can then assemble into the
macromolecular thick filament. The coiled-coil region
provides the structural backbone the thick filament.
Length = 859
Score = 30.4 bits (69), Expect = 2.5
Identities = 17/68 (25%), Positives = 31/68 (45%), Gaps = 13/68 (19%)
Query: 339 DIQSKLRQEIMATKKK-EGELTYEICHKMSYLDKVTKEALRMYPSLPQLDRISVKKYKLP 397
+ ++K + E KKK EG++ E+ + + +K EA + +VKKY+
Sbjct: 535 EAEAKGKAEASRLKKKLEGDIN-ELEIALDHANKANAEAQK-----------NVKKYQQQ 582
Query: 398 NTDLTLDV 405
+L V
Sbjct: 583 VKELQTQV 590
>gnl|CDD|178142 PLN02527, PLN02527, aspartate carbamoyltransferase.
Length = 306
Score = 29.7 bits (67), Expect = 3.2
Identities = 29/105 (27%), Positives = 50/105 (47%), Gaps = 25/105 (23%)
Query: 297 SPDDVEMTDDV---ITAQSFVFFFGGYETSSSVLTFCLYELARNPDI--QSKLRQEIMAT 351
+PD V+M DD+ +T++ +E SS L E+A D+ Q+++++E
Sbjct: 185 APDVVKMKDDIKDYLTSKGV-----EWEESSD-----LMEVASKCDVLYQTRIQRERFGE 234
Query: 352 KKKEGELTYEICHKMSYLDK-----VTKEALRMYPSLPQLDRISV 391
+ YE +DK + K A+ M+P LP+LD I+
Sbjct: 235 RIDL----YEAARGKYIVDKKVMDVLPKHAVVMHP-LPRLDEITT 274
>gnl|CDD|131987 TIGR02941, Sigma_B, RNA polymerase sigma-B factor. This sigma
factor is restricted to certain lineages of the order
Bacillales including Staphylococcus , Listeria and
Bacillus.
Length = 255
Score = 29.5 bits (66), Expect = 4.0
Identities = 33/133 (24%), Positives = 53/133 (39%), Gaps = 20/133 (15%)
Query: 134 GEYWKRLRNKLSPTFTSGKIKYMFPLIKKCSDQL---------ITTIRKQIGESKQMSLE 184
GE + LR+K +IK + P IKK D+L I I +G S++ LE
Sbjct: 92 GEIKRYLRDKTWSVHVPRRIKELGPKIKKAIDELTDHLQRSPKIIEIADHLGLSEEEVLE 151
Query: 185 VKD----YCARYTTDVI-----GSTAFGIEINSLENPDSEFRQVSLLVMKPSVLQMLKAV 235
+ + Y A DVI GST ++ + + + Q ++ +L +L
Sbjct: 152 IMEMGQSYRALSVDDVIEADSDGSTVARLDS--VGEVEDGYDQTERRMVLEKILPILSER 209
Query: 236 LSELIPLIKYLNL 248
+I NL
Sbjct: 210 EKSIIHCTFEENL 222
>gnl|CDD|187758 cd09318, TDT_SSU1, Tellurite-resistance/Dicarboxylate Transporter
(TDT) family includes sulfite sensitivity protein
(sulfite efflux pump; SSU1). This family contains the
sulfite sensitivity protein (sulfite efflux pump; SSU1)
and belongs to the tellurite-resistance/dicarboxylate
transporter (TDT) family. The SSU1 gene encodes the
sulfite pump required for efficient sulfite efflux.
Mutations in the SSU1 gene cause sensitivity to sulfite
while overexpression confers heightened resistance to
sulfite toxicity. In dematophytes and other filamentous
fungi, sulfite is excreted as a reducing agent during
keratin degradation; thus sulfite transporters in
keratinolytic fungi could be a new target for antifungal
drugs in dermatology. The number of genes encoding
sulfite efflux pumps in fungal genomes varies from
species to species.
Length = 341
Score = 29.1 bits (66), Expect = 5.0
Identities = 11/45 (24%), Positives = 17/45 (37%), Gaps = 3/45 (6%)
Query: 13 LVLCSLPLIFLFIKSIFNYRYWKNKNVF---YFSPTFPFGNYGAG 54
L+L L +LF+ Y + F ++ TFP G
Sbjct: 265 LILWGFGLWWLFLAVASILSYIRPGLPFNKGWWGFTFPLGVMALA 309
>gnl|CDD|143383 cd07878, STKc_p38beta_MAPK11, Catalytic domain of the
Serine/Threonine Kinase, p38beta Mitogen-Activated
Protein Kinase. Serine/Threonine Kinases (STKs),
p38beta subfamily, catalytic (c) domain. STKs catalyze
the transfer of the gamma-phosphoryl group from ATP to
serine/threonine residues on protein substrates. The
p38beta subfamily is part of a larger superfamily that
includes the catalytic domains of other protein STKs,
protein tyrosine kinases, RIO kinases, aminoglycoside
phosphotransferase, choline kinase, and phosphoinositide
3-kinase. p38 kinases are mitogen-activated protein
kinases (MAPKs), serving as important mediators of
cellular responses to extracellular signals. They are
activated by the MAPK kinases MKK3 and MKK6, which in
turn are activated by upstream MAPK kinase kinases
including TAK1, ASK1, and MLK3, in response to cellular
stresses or inflammatory cytokines. Vertebrates contain
four isoforms of p38, named alpha, beta, gamma, and
delta. p38beta, also called MAPK11, is widely expressed
in tissues and shows more similarity with p38alpha than
with the other isoforms. Both are sensitive to
pyridinylimidazoles and share some common substrates
such as MAPK activated protein kinase 2 (MK2) and the
transcription factors ATF2, c-Fos and, ELK-1. p38beta is
involved in regulating the activation of the
cyclooxygenase-2 promoter and the expression of
TGFbeta-induced alpha-smooth muscle cell actin.
Length = 343
Score = 29.2 bits (65), Expect = 5.2
Identities = 28/89 (31%), Positives = 39/89 (43%), Gaps = 19/89 (21%)
Query: 368 YLDKVTKEALRMY----PSLPQLDRISVKKYKLP------NTDLTLDVGTKISI------ 411
L K++ E R Y P +PQ D + + P L LD +IS
Sbjct: 239 VLKKISSEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALAH 298
Query: 412 PTFAIHYDPEYYPDPEKFDPERFSPENIE 440
P F+ ++DPE P+ E +D SPEN E
Sbjct: 299 PYFSQYHDPEDEPEAEPYDE---SPENKE 324
>gnl|CDD|233742 TIGR02135, phoU_full, phosphate transport system regulatory protein
PhoU. This model describes PhoU, a regulatory protein
of unknown mechanism for high-affinity phosphate ABC
transporter systems. The protein consists of two copies
of the domain described by pfam01895. Deletion of PhoU
activates constitutive expression of the phosphate ABC
transporter and allows phosphate transport, but causes a
growth defect and so likely has some second function
[Regulatory functions, Other, Transport and binding
proteins, Anions].
Length = 212
Score = 28.8 bits (65), Expect = 5.6
Identities = 13/73 (17%), Positives = 27/73 (36%), Gaps = 2/73 (2%)
Query: 204 IEINSLENPDSEFRQVSLLVMKPSVLQMLKAVLSELIPLIKYLNLKI--FDPRISQFFSN 261
+ E L M L+MLK L + L ++ D R+ + +
Sbjct: 101 RALRLKEEDAKPKHLEELEKMGKLALKMLKDALDAFLNKDAELARQVAEMDERVDELYRQ 160
Query: 262 LVKTNLSYREKNN 274
+ + ++Y ++N
Sbjct: 161 IFRELVTYMKENP 173
>gnl|CDD|143382 cd07877, STKc_p38alpha_MAPK14, Catalytic domain of the
Serine/Threonine Kinase, p38alpha Mitogen-Activated
Protein Kinase. Serine/Threonine Kinases (STKs),
p38alpha subfamily, catalytic (c) domain. STKs catalyze
the transfer of the gamma-phosphoryl group from ATP to
serine/threonine residues on protein substrates. The
p38alpha subfamily is part of a larger superfamily that
includes the catalytic domains of other protein STKs,
protein tyrosine kinases, RIO kinases, aminoglycoside
phosphotransferase, choline kinase, and phosphoinositide
3-kinase. p38 kinases are mitogen-activated protein
kinases (MAPKs), serving as important mediators of
cellular responses to extracellular signals. They are
activated by the MAPK kinases MKK3 and MKK6, which in
turn are activated by upstream MAPK kinase kinases
including TAK1, ASK1, and MLK3, in response to cellular
stresses or inflammatory cytokines. Vertebrates contain
four isoforms of p38, named alpha, beta, gamma, and
delta. p38alpha, also called MAPK14, is expressed in
most tissues and is the major isoform involved in the
immune and inflammatory response. It is the central p38
MAPK involved in myogenesis. It plays a role in
regulating cell cycle check-point transition and
promoting cell differentiation. p38alpha also regulates
cell proliferation and death through crosstalk with the
JNK pathway. Its substrates include MAPK activated
protein kinase 2 (MK2), MK5, and the transcription
factors ATF2 and Mitf.
Length = 345
Score = 28.5 bits (63), Expect = 8.1
Identities = 20/98 (20%), Positives = 42/98 (42%), Gaps = 17/98 (17%)
Query: 367 SYLDKVTKEALRMY-PSLPQLDRIS---------------VKKYKLPNTDLTLDVGTKIS 410
L K++ E+ R Y SL Q+ +++ ++K + ++D + ++
Sbjct: 240 ELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA 299
Query: 411 IPTFAIHYDPEYYPDPEKFDPERFSPE-NIESRPHYTY 447
FA ++DP+ P + +D S + I+ TY
Sbjct: 300 HAYFAQYHDPDDEPVADPYDQSFESRDLLIDEWKSLTY 337
Database: CDD.v3.10
Posted date: Mar 20, 2013 7:55 AM
Number of letters in database: 10,937,602
Number of sequences in database: 44,354
Lambda K H
0.323 0.140 0.415
Gapped
Lambda K H
0.267 0.0740 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 44354
Number of Hits to DB: 26,123,224
Number of extensions: 2605393
Number of successful extensions: 2440
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2353
Number of HSP's successfully gapped: 66
Length of query: 500
Length of database: 10,937,602
Length adjustment: 101
Effective length of query: 399
Effective length of database: 6,457,848
Effective search space: 2576681352
Effective search space used: 2576681352
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 61 (27.3 bits)