RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy2446
(500 letters)
>3nxu_A Cytochrome P450 3A4; alpha beta protein, cytochrome P450 fold,
hemoprotein, monoo cytochrome P450 reductase,
endoplasmic reticulum; HET: HEM RIT; 2.00A {Homo
sapiens} PDB: 1w0e_A* 1w0g_A* 2j0d_A* 2v0m_A* 1w0f_A*
1tqn_A* 3ua1_A* 3tjs_A*
Length = 485
Score = 591 bits (1526), Expect = 0.0
Identities = 154/457 (33%), Positives = 248/457 (54%), Gaps = 24/457 (5%)
Query: 30 NYRYWKNKNVFYFSPTFPFGNYGAGFLSRITFHQMHCEFYNKIKYDLKLPYGGLYHLMTP 89
++ +K + +P GN +++H+ C F + + G Y P
Sbjct: 7 SHGLFKKLGIPGPTPLPFLGNI-------LSYHKGFCMFDMEC-HKKYGKVWGFYDGQQP 58
Query: 90 KLMVTDPELYKYILIKD-FDHFVDRGIGESDAKRDPIEGHLFGSKGEYWKRLRNKLSPTF 148
L +TDP++ K +L+K+ + F +R ++ + ++ E WKRLR+ LSPTF
Sbjct: 59 VLAITDPDMIKTVLVKECYSVFTNRRPFGPV---GFMKSAISIAEDEEWKRLRSLLSPTF 115
Query: 149 TSGKIKYMFPLIKKCSDQLITTIRKQIGESKQMSLEVKDYCARYTTDVIGSTAFGIEINS 208
TSGK+K M P+I + D L+ +R++ K + +KD Y+ DVI ST+FG+ I+S
Sbjct: 116 TSGKLKEMVPIIAQYGDVLVRNLRREAETGK--PVTLKDVFGAYSMDVITSTSFGVNIDS 173
Query: 209 LENPDSEFRQVSLLVMKPSVLQMLKAVLSE---LIPLIKYLNLKIFDPRISQFFSNLVKT 265
L NP F + + +++ L ++ LIP+++ LN+ +F ++ F VK
Sbjct: 174 LNNPQDPFVENTKKLLRFDFLDPFFLSITVFPFLIPILEVLNICVFPREVTNFLRKSVKR 233
Query: 266 NLSYR-EKNNIKRDDFLNIMMQLQIAQRGKTLSPDDVEMTDDVITAQSFVFFFGGYETSS 324
R E R DFL +M+ + + ++D + AQS +F F GYET+S
Sbjct: 234 MKESRLEDTQKHRVDFLQLMIDS----QNSKETESHKALSDLELVAQSIIFIFAGYETTS 289
Query: 325 SVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSYLDKVTKEALRMYPSLP 384
SVL+F +YELA +PD+Q KL++EI A + TY+ +M YLD V E LR++P
Sbjct: 290 SVLSFIMYELATHPDVQQKLQEEIDAVLPNKAPPTYDTVLQMEYLDMVVNETLRLFPIAM 349
Query: 385 QLDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPEYYPDPEKFDPERFSPENIESRPH 444
+L+R+ K ++ + + G + IP++A+H DP+Y+ +PEKF PERFS +N ++
Sbjct: 350 RLERVCKKDVEIN--GMFIPKGVVVMIPSYALHRDPKYWTEPEKFLPERFSKKNKDNIDP 407
Query: 445 YTYLPFGDGPRNCIGMRFGTIQFKIGLAQLISNFEFS 481
Y Y PFG GPRNCIGMRF + K+ L +++ NF F
Sbjct: 408 YIYTPFGSGPRNCIGMRFALMNMKLALIRVLQNFSFK 444
>3mdm_A Cholesterol 24-hydroxylase; CYP46A1, P450 46A1, thioperamide,
monooxygenase, metab enzyme, oxidoreductase, heme,
cholesterol metabolism; HET: HEM FJZ; 1.60A {Homo
sapiens} PDB: 2q9g_A* 2q9f_A* 3mdr_A* 3mdt_A* 3mdv_A*
Length = 456
Score = 318 bits (818), Expect = e-104
Identities = 93/437 (21%), Positives = 181/437 (41%), Gaps = 47/437 (10%)
Query: 61 FHQMHCEFYNKIKYDLKLPYGGLYHL---MTPKLMVTDPELYKYILIKD---FDHFVDRG 114
+ ++ K YG + + ++VT PE K L+ D + R
Sbjct: 12 LQDVFLDWAKK--------YGPVVRVNVFHKTSVIVTSPESVKKFLMSTKYNKDSKMYRA 63
Query: 115 IGESDAKRDPIEGHLFGSKGEYWKRLRNKLSPTFTSGKIKYMFPLIKKCSDQLITTIRKQ 174
+ +R +G + E W + R + F+ + + + ++QL+ + +
Sbjct: 64 LQTVFGERLFGQGLVSECNYERWHKQRRVIDLAFSRSSLVSLMETFNEKAEQLVEILEAK 123
Query: 175 IGESKQMSLEVKDYCARYTTDVIGSTAFGIEINSLENPDSEFRQVSLLVMKPSVLQMLKA 234
+ ++D D++ AFG+E + L Q +V ML+
Sbjct: 124 ADGQT--PVSMQDMLTYTAMDILAKAAFGMETSMLLGAQKPLSQ--------AVKLMLEG 173
Query: 235 VLSELIPLIKYLNLKIFDPR--------ISQFFSNLVKTNLSYREKNNIKRDDFLNIMMQ 286
+ + L K+L K R + Q + V+ ++ D L +++
Sbjct: 174 ITASRNTLAKFLPGKRKQLREVRESIRFLRQVGRDWVQRRREALKRGEEVPADILTQILK 233
Query: 287 LQIAQRGKTLSPDDVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQ 346
+ + D+ + FF G+ETS++ L F + EL+R P+I ++L+
Sbjct: 234 AE-----------EGAQDDEGLLDNFVTFFIAGHETSANHLAFTVMELSRQPEIVARLQA 282
Query: 347 EIMATKKKEGELTYEICHKMSYLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLTLDVG 406
E+ + L +E ++ YL +V KE+LR+YP R+ ++ + + +
Sbjct: 283 EVDEVIGSKRYLDFEDLGRLQYLSQVLKESLRLYPPAWGTFRLLEEETLI--DGVRVPGN 340
Query: 407 TKISIPTFAIHYDPEYYPDPEKFDPERFSPENIESRPHYTYLPFGDGPRNCIGMRFGTIQ 466
T + T+ + Y+ DP F+P+RF P +P +TY PF G R+CIG +F ++
Sbjct: 341 TPLLFSTYVMGRMDTYFEDPLTFNPDRFGPGA--PKPRFTYFPFSLGHRSCIGQQFAQME 398
Query: 467 FKIGLAQLISNFEFSID 483
K+ +A+L+ EF +
Sbjct: 399 VKVVMAKLLQRLEFRLV 415
>3dsk_A Cytochrome P450 74A, chloroplast; P450 fold, fatty acid
biosynthesis, heme, iron, synthesis, lyase,
metal-binding, oxylipin biosynthesis; HET: HEM T25;
1.55A {Arabidopsis thaliana} PDB: 2rcm_A* 3dsj_A*
3dsi_A* 2rcl_A* 2rch_A* 3cli_A*
Length = 495
Score = 314 bits (807), Expect = e-102
Identities = 62/449 (13%), Positives = 130/449 (28%), Gaps = 58/449 (12%)
Query: 61 FHQMHCEFYNKI--KYDLKLPYGGLYHLMTPKLMVTDPELYKYILIKDFDHFVDRGIGE- 117
+ Q EF+ KY+ ++ + +P++ + K F D E
Sbjct: 50 YDQGAEEFFKSRIRKYN---STVYRVNMPPGAFIAENPQVVALLDGKSFPVLFDVDKVEK 106
Query: 118 ----------SDAKRDPIEGHLFGSKGEYWKRLRNKLSPTFTSGKIKYMFPLIKKCSDQL 167
S + E L +FP + +L
Sbjct: 107 KDLLTGTYMPSTELTGGYRILSYLDPSEPKHEKLKNLLFFLLKSSRNRIFPEFQATYSEL 166
Query: 168 ITTIRKQIGESKQMSLEVKDYCARYTTDVIGSTAFGIEINSLENPDSEFRQVSLLVMKPS 227
++ K++ S + + + + +G + +
Sbjct: 167 FDSLEKEL--SLKGKADFGGSSDGTAFNFLARAFYGTNPADTKLKADAPGLI-------- 216
Query: 228 VLQMLKAVLSELIPLIKYLNLKIFDPRISQFFSNLVKTNLSYREKNNIKRDDFLNIMMQL 287
K VL L PL+ ++ + + F + + D+ +
Sbjct: 217 ----TKWVLFNLHPLLSIGLPRVIEEPLIHTF----------SLPPALVKSDYQRLYEFF 262
Query: 288 QIAQRGKTLSPDDVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYELAR-----NPDIQS 342
+ + D + ++ + T + + + + + +
Sbjct: 263 LESAGEILVEADKLGISREEATHNLLFATC---FNTWGGMKILFPNMVKRIGRAGHQVHN 319
Query: 343 KLRQEIMAT-KKKEGELTYEICHKMSYLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDL 401
+L +EI + K GELT KM V E LR P + + K + + D
Sbjct: 320 RLAEEIRSVIKSNGGELTMGAIEKMELTKSVVYECLRFEPPVTAQYGRAKKDLVIESHDA 379
Query: 402 TLDV--GTKISIPTFAIHYDPEYYPDPEKFDPERFSPENIESRPHYTYLPFG-------D 452
V G + DP+ + ++F PERF E E + G
Sbjct: 380 AFKVKAGEMLYGYQPLATRDPKIFDRADEFVPERFVGEEGEKLLRHVLWSNGPETETPTV 439
Query: 453 GPRNCIGMRFGTIQFKIGLAQLISNFEFS 481
G + C G F + ++ + ++ ++
Sbjct: 440 GNKQCAGKDFVVLVARLFVIEIFRRYDSF 468
>3n9y_A Cholesterol SIDE-chain cleavage enzyme; cytochrome P450,
cholesterol SIDE chain cleavage, structural genomics,
structural genomics consortium, SGC; HET: HEM CLR; 2.10A
{Homo sapiens} PDB: 3n9z_A* 3na1_A* 3na0_A* 3mzs_A*
Length = 487
Score = 311 bits (798), Expect = e-101
Identities = 96/463 (20%), Positives = 169/463 (36%), Gaps = 52/463 (11%)
Query: 44 PTFPF-GNYGAGFLSRITFHQMHCEFYNKIKYDLKLPYGGLYHL---MTPKLMVTDPELY 99
+ Y F H++H YG +Y + V DPE
Sbjct: 15 GDNGWLNLYH--FWRETGTHKVH-----LHHVQNFQKYGPIYREKLGNVESVYVIDPEDV 67
Query: 100 KYILIKDFDHFVDRGIGESDAKRDPIEGH--LFGSKGEYWKRLRNKLSPTFTSGK-IKYM 156
+ + + I A + + K WK+ R L+ + + K
Sbjct: 68 ALLFKSEGPNPERFLIPPWVAYHQYYQRPIGVLLKKSAAWKKDRVALNQEVMAPEATKNF 127
Query: 157 FPLIKKCSDQLITTIRKQIGE--SKQMSLEVKDYCARYTTDVIGSTAFGIEINSLENPDS 214
PL+ S ++ + ++I + S S ++ D R+ + I + FG LE +
Sbjct: 128 LPLLDAVSRDFVSVLHRRIKKAGSGNYSGDISDDLFRFAFESITNVIFGERQGMLEEVVN 187
Query: 215 EFRQVSLLVMKPSVLQMLKAVLSELI---PLIKYLNLKIFDP------RISQFFSNLVKT 265
Q ++ QM + L L + K + I +
Sbjct: 188 PEAQR----FIDAIYQMFHTSVPMLNLPPDLFRLFRTKTWKDHVAAWDVIFSKADIYTQN 243
Query: 266 NLSYREKNNIKRDDFLNIMMQLQIAQRGKTLSPDDVEMTDDVITAQSFVFFFGGYETSSS 325
+ D+ I+ +L D +M+ + I A GG +T+S
Sbjct: 244 FYWELRQKGSVHHDYRGILYRLL----------GDSKMSFEDIKANVTEMLAGGVDTTSM 293
Query: 326 VLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSYLDKVTKEALRMYPSLPQ 385
L + LYE+ARN +Q LR E++A + + + + L KE LR++P
Sbjct: 294 TLQWHLYEMARNLKVQDMLRAEVLAARHQAQGDMATMLQLVPLLKASIKETLRLHPISVT 353
Query: 386 LDRISVKK-----YKLPNTDLTLDVGTKISIPTFAIHYDPEYYPDPEKFDPERFSPENIE 440
L R V Y +P T + + +A+ +P ++ DPE FDP R+ ++ +
Sbjct: 354 LQRYLVNDLVLRDYMIP-------AKTLVQVAIYALGREPTFFFDPENFDPTRWLSKD-K 405
Query: 441 SRPHYTYLPFGDGPRNCIGMRFGTIQFKIGLAQLISNFEFSID 483
+ ++ L FG G R C+G R ++ I L ++ NF I
Sbjct: 406 NITYFRNLGFGWGVRQCLGRRIAELEMTIFLINMLENFRVEIQ 448
>3s79_A Cytochrome P450 19A1; oxidoreductase; HET: HEM ASD; 2.75A {Homo
sapiens} PDB: 3eqm_A* 3s7s_A*
Length = 503
Score = 295 bits (758), Expect = 7e-95
Identities = 73/489 (14%), Positives = 161/489 (32%), Gaps = 44/489 (8%)
Query: 1 MTLLTNSLVLDTLVLCSLPLIFLFIKSIFNYRYWKNKNVFYFSPTFPFGNYGAGFLSRIT 60
+ S+V + + ++P++ L + + Y ++ G I+
Sbjct: 9 IHYNITSIVPEAMPAATMPVLLLTGLFLLVWNYEGTSSIPGPGYCMGIGPL-------IS 61
Query: 61 FHQMHCEFYNKIKYDLKLPYGGLYHL---MTPKLMVTDPELYKYILIKDFDHFVDRGIGE 117
+ YG + L+++ +I+ +
Sbjct: 62 HGRFLWMGIGSACNYYNRVYGEFMRVWISGEETLIISKSSSMFHIMKHNHYSSRFGSKLG 121
Query: 118 SDAKRDPIEGHLFGSKGEYWKRLRNKLSPTFTSGKIKYMFPLIKKCSDQLITTIRKQIGE 177
+G +F + E WK R + + M + + + + + E
Sbjct: 122 LQCIGMHEKGIIFNNNPELWKTTRPFFMKALSGPGLVRMVTVCAESLKTHLDRLEEVTNE 181
Query: 178 SKQMSLEVKDYCARYTTDVIGSTAFGIEINSLENPDSE---FRQVSLLVMKPSVLQMLKA 234
S ++V R D + I ++ F L++KP + +
Sbjct: 182 SG--YVDVLTLLRRVMLDTSNTLFLRIPLDESAIVVKIQGYFDAWQALLIKPDIFFKISW 239
Query: 235 VLSELIPLIKYLNLKIFDPRISQFFSNLVKT--NLSYREKNNIKRDDFLNIMMQLQIAQR 292
+ + +K L L+ E+ + DF ++ +
Sbjct: 240 LYKKYEKSVKDLK---------DAIEVLIAEKRRRISTEEKLEECMDFATELILAE---- 286
Query: 293 GKTLSPDDVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATK 352
++T + + +T S L F L+ +A++P+++ + +EI
Sbjct: 287 ------KRGDLTRENVNQCILEMLIAAPDTMSVSLFFMLFLIAKHPNVEEAIIKEIQTV- 339
Query: 353 KKEGELTYEICHKMSYLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKISIP 412
E ++ + K+ ++ E++R P + + R +++ + + GT I +
Sbjct: 340 IGERDIKIDDIQKLKVMENFIYESMRYQPVVDLVMRKALEDDVIDGY--PVKKGTNIILN 397
Query: 413 TFAIHYDPEYYPDPEKFDPERFSPENIESRPHYTYLPFGDGPRNCIGMRFGTIQFKIGLA 472
+H E++P P +F E F+ P+ + PFG GPR C G + K L
Sbjct: 398 IGRMH-RLEFFPKPNEFTLENFAKN----VPYRYFQPFGFGPRGCAGKYIAMVMMKAILV 452
Query: 473 QLISNFEFS 481
L+ F
Sbjct: 453 TLLRRFHVK 461
>3k9v_A 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitochondrial;
mitochondrial cytochrome P450, monotopic membrane
protein, monooxygenase; HET: HEM CPS; 2.50A {Rattus
norvegicus} PDB: 3k9y_A*
Length = 482
Score = 286 bits (734), Expect = 1e-91
Identities = 87/441 (19%), Positives = 158/441 (35%), Gaps = 56/441 (12%)
Query: 61 FHQMHCEFYNKIKYDLKLPYGGLYHL---MTPKLMVTDPELYKYILIKDFDHFVDRGIGE 117
H E++ K YG ++ + + + P L + + + H I
Sbjct: 50 QHDTLAEYHKK--------YGQIFRMKLGSFDSVHLGSPSLLEALYRTESAHPQRLEIKP 101
Query: 118 SDAKRD--PIEGHLFGSKGEYWKRLRNKLSPTFTSGK-IKYMFPLIKKCSDQLITTIRKQ 174
A RD L +G+ W+R+R+ I + I + + + +
Sbjct: 102 WKAYRDHRNEAYGLMILEGQEWQRVRSAFQKKLMKPVEIMKLDKKINEVLADFLERMDEL 161
Query: 175 IGESKQMSLEVKDYCARYTTDVIGSTAFGIEINSLENPDSEFRQVSLLVMKPSVLQMLKA 234
E + ++ +++ + I + L+ E L ++ M+
Sbjct: 162 CDERGR-IPDLYSELNKWSFESICLVLYEKRFGLLQKETEE----EALTFITAIKTMMST 216
Query: 235 VLS---ELIPLIKYLNLKIF------DPRISQFFSNLVKTNLSYREKNNIKRDDFLNIMM 285
+ L K LN K++ I + + L + DFL +
Sbjct: 217 FGKMMVTPVELHKRLNTKVWQAHTLAWDTIFKSVKPCIDNRLQRYSQQ--PGADFLCDIY 274
Query: 286 QLQIAQRGKTLSPDDVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLR 345
Q ++ + A ET+++ L + LY L+RNP Q +L
Sbjct: 275 QQD-------------HLSKKELYAAVTELQLAAVETTANSLMWILYNLSRNPQAQRRLL 321
Query: 346 QEIMATKKKEGELTYEICHKMSYLDKVTKEALRMYPSLPQLDRISVK-----KYKLPNTD 400
QE+ + E M YL KE++R+ PS+P R K +Y LP
Sbjct: 322 QEVQSVLPDNQTPRAEDLRNMPYLKACLKESMRLTPSVPFTTRTLDKPTVLGEYALP--- 378
Query: 401 LTLDVGTKISIPTFAIHYDPEYYPDPEKFDPERFSPENIESRPHYTYLPFGDGPRNCIGM 460
GT +++ T + + + D KF PER+ + + + +LPFG G R CIG
Sbjct: 379 ----KGTVLTLNTQVLGSSEDNFEDSHKFRPERWLQKE-KKINPFAHLPFGIGKRMCIGR 433
Query: 461 RFGTIQFKIGLAQLISNFEFS 481
R +Q + L +I ++
Sbjct: 434 RLAELQLHLALCWIIQKYDIV 454
>3dan_A Cytochrome P450 74A2; AOS heme cytochrome P450 structure, fatty
acid biosynthesis, heme, iron, lipid synthesis, lyase,
metal-binding; HET: HEM; 1.80A {Parthenium argentatum}
PDB: 3dam_A* 3dbm_A*
Length = 473
Score = 283 bits (726), Expect = 2e-90
Identities = 57/416 (13%), Positives = 132/416 (31%), Gaps = 53/416 (12%)
Query: 92 MVTDPELYKYILIKDFDHFVDRGIGE------------SDAKRDPIEGHLFGSKGEYWKR 139
+ ++P++ + K F D E + +
Sbjct: 62 VSSNPKVIVLLDAKSFPILFDVSKVEKKDLFTGTYMPSTKLTGGYRVLSYLDPSEPRHAQ 121
Query: 140 LRNKLSPTFTSGKIKYMFPLIKKCSDQLITTIRKQIGESKQMSLEVKDYCARYTTDVIGS 199
L+ L + P + +L + ++ ++ + D + +G
Sbjct: 122 LK-NLLFFMLKNSSNRVIPQFETTYTELFEGLEAELAKNGKA--AFNDVGEQAAFRFLGR 178
Query: 200 TAFGIEINSLENPDSEFRQVSLLVMKPSVLQMLKAVLSELIPLIKYLNLKIFDPRISQFF 259
F +++ + ++ VL L L +P + +P + F
Sbjct: 179 AYFNSN-----PEETKLGTSAPTLISSWVLFNLAPTLDLGLPWF------LQEPLLHTFR 227
Query: 260 SNLVKTNLSYREKNNIKRDDFLNIMMQLQIAQRGKTLSPDDVEMTDDVITAQSFVFFFGG 319
+Y + + + +M Q + D+ + F F
Sbjct: 228 LPAFLIKSTYNKLYDYFQSVATPVMEQAE----------KLGVPKDEAVHNILFAVCFNT 277
Query: 320 YETSSSVLTFCLYELAR-NPDIQSKLRQEIMAT--KKKEGELTYEICHKMSYLDKVTKEA 376
+ + L + ++ ++L +EI +G +T E +M V E+
Sbjct: 278 FGGVKILFPNTLKWIGLAGENLHTQLAEEIRGAIKSYGDGNVTLEAIEQMPLTKSVVYES 337
Query: 377 LRMYPSLPQLDRISVKKYKLPNTDLTLDV--GTKISIPTFAIHYDPEYYPDPEKFDPERF 434
LR+ P +P + + + + D T +V G + DP+ + PE++ P+RF
Sbjct: 338 LRIEPPVPPQYGKAKSNFTIESHDATFEVKKGEMLFGYQPFATKDPKVFDRPEEYVPDRF 397
Query: 435 SPENIESRPHYTYLPFGDGP---------RNCIGMRFGTIQFKIGLAQLISNFEFS 481
+ Y+ + +GP + C G F + ++ + +L ++
Sbjct: 398 VGDG---EALLKYVWWSNGPETESPTVENKQCAGKDFVVLITRLFVIELFRRYDSF 450
>2ij2_A Cytochrome P450 BM3; monoxygenase, heme binding protein, atomic
resolution, oxidoreductase; HET: HEM; 1.20A {Bacillus
megaterium} SCOP: a.104.1.1 PDB: 2hpd_A* 1fag_A* 1jpz_A*
1zo9_A* 1zo4_A* 1zoa_A* 3m4v_A* 3ekb_A* 3ben_A* 1fah_A*
2nnb_A* 3kx3_A* 3ekd_A* 3ekf_A* 1smi_A* 1smj_A* 3kx4_A*
2ij3_A* 2ij4_A* 3hf2_A* ...
Length = 470
Score = 281 bits (722), Expect = 6e-90
Identities = 94/419 (22%), Positives = 170/419 (40%), Gaps = 43/419 (10%)
Query: 80 YGGLYHL---MTPKLMVTDPELYKYILIKDFDHFVDRGIGESDAKRDPIEGH-LFGSK-- 133
G ++ ++ L K + ++ G LF S
Sbjct: 36 LGEIFKFEAPGRVTRYLSSQRLIKEACDESRFDKNL---SQALKFVRDFAGDGLFTSWTH 92
Query: 134 GEYWKRLRNKLSPTFTSGKIKYMFPLIKKCSDQLITTIRKQIGESKQMSLEVKDYCARYT 193
+ WK+ N L P+F+ +K ++ + QL+ + + +EV + R T
Sbjct: 93 EKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADE---HIEVPEDMTRLT 149
Query: 194 TDVIGSTAFGIEINSLENPDSEFRQVSLLVMKPSVLQMLKAVLSELIPLIKYLNLKIFDP 253
D IG F NS P + M++A L E + ++ N
Sbjct: 150 LDTIGLCGFNYRFNSFYRDQ----------PHPFITSMVRA-LDEAMNKLQRANPDDPAY 198
Query: 254 --------RISQFFSNLVKTNLSYREKNNIKRDDFLNIMMQLQIAQRGKTLSPDDVEMTD 305
+ ++LV ++ R+ + + DD L M+ + + G+ L D +
Sbjct: 199 DENKRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLD--DENIRY 256
Query: 306 DVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHK 365
+IT F G+ET+S +L+F LY L +NP + K +E +Y+ +
Sbjct: 257 QIIT-----FLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVD-PVPSYKQVKQ 310
Query: 366 MSYLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPEYYP- 424
+ Y+ V EALR++P+ P + + L + L+ G ++ + +H D +
Sbjct: 311 LKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGG-EYPLEKGDELMVLIPQLHRDKTIWGD 369
Query: 425 DPEKFDPERFSPENIESRPHYTYLPFGDGPRNCIGMRFGTIQFKIGLAQLISNFEFSID 483
D E+F PERF EN + P + + PFG+G R CIG +F + + L ++ +F+F
Sbjct: 370 DVEEFRPERF--ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDH 426
>3dbg_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP170A1,
molecular mechanism, heme, iron, metal-binding,
monooxygenase; HET: HEM; 2.60A {Streptomyces coelicolor
A3} PDB: 3el3_A*
Length = 467
Score = 273 bits (699), Expect = 2e-86
Identities = 79/415 (19%), Positives = 149/415 (35%), Gaps = 43/415 (10%)
Query: 80 YGGLYHL---MTPKLMVTDPELYKYILIKDFDHFVDRGIGESDAKRDPIEGH-LFGSKGE 135
+G + + VT+PEL + + H ++ + + + G
Sbjct: 54 HGDVVRIKLGPKTVYAVTNPELTGALALNPDYHIAGPLW---ESLEGLLGKEGVATANGP 110
Query: 136 YWKRLRNKLSPTFTSGKIKYMFPLIKKCSDQLITTIRKQIGESKQMSLEVKDYCARYTTD 195
+R R + P F I P++++ + L + G++ ++ R
Sbjct: 111 LHRRQRRTIQPAFRLDAIPAYGPIMEEEAHALTERWQP--GKT----VDATSESFRVAVR 164
Query: 196 VIGSTAFGIEINSLENPDSEFRQVSLLVMKPSVLQMLKAVLSELIPLIKYLNLKIFDPRI 255
V + E + ++ + ++ +PL +
Sbjct: 165 VAARCLLRGQYMD-ERAERLCVALATVFRGMYRRMVVPLGPLYRLPLPANRRFNDALADL 223
Query: 256 SQFFSNLVKTNLSYREKNNIKRDDFLNIMMQLQIAQR--GKTLSPDDVEMTDDVITAQSF 313
++ R + K DD L +++ A+ G + + E+ D V+
Sbjct: 224 HLLVDEIIAE----RRASGQKPDDLLTALLE---AKDDNGDPIG--EQEIHDQVVA---- 270
Query: 314 VFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSYLDKVT 373
G ET +S + + L LA +P+ ++R E+ A + +E K+ + V
Sbjct: 271 -ILTPGSETIASTIMWLLQALADHPEHADRIRDEVEAVTG-GRPVAFEDVRKLRHTGNVI 328
Query: 374 KEALRMYPSLPQLDRISVKKYKLPNTDLTLD-----VGTKISIPTFAIHYDPEYYPDPEK 428
EA+R+ P++ L R +V + L G I +AI DP+ Y D +
Sbjct: 329 VEAMRLRPAVWVLTRRAVA-------ESELGGYRIPAGADIIYSPYAIQRDPKSYDDNLE 381
Query: 429 FDPERFSPENIESRPHYTYLPFGDGPRNCIGMRFGTIQFKIGLAQLISNFEFSID 483
FDP+R+ PE + P Y PF G R C F Q + A L + + F
Sbjct: 382 FDPDRWLPERAANVPKYAMKPFSAGKRKCPSDHFSMAQLTLITAALATKYRFEQV 436
>3i3k_A Lanosterol 14-alpha demethylase; cytochrome P450, hemeprotein,
alternative splicing, cholesterol biosynthesis,
endoplasmic reticulum, heme, iron; HET: HEM KLN BCD;
2.80A {Homo sapiens} PDB: 3jus_A* 3juv_A* 3ld6_A*
Length = 461
Score = 265 bits (679), Expect = 1e-83
Identities = 75/416 (18%), Positives = 145/416 (34%), Gaps = 42/416 (10%)
Query: 80 YGGLYHLM---TPKLMVTDPELYKYILIKDFDHFVDRGIGESDAKRDPI--EGHLFGSKG 134
YG ++ + + + + ++ S P+ +G +
Sbjct: 44 YGPVFSFTMVGKTFTYLLGSDAAALLFNSK-NEDLNAEDVYSRLTT-PVFGKGVAYDVPN 101
Query: 135 EYWKRLRNKLSPTFTSGKIKYMFPLIKKCSDQLITTIRKQIGESKQMSLEVKDYCARYTT 194
+ + L K +I+K + + + GES V + +
Sbjct: 102 PVFLEQKKMLKSGLNIAHFKQHVSIIEKETKEYF----ESWGESG--EKNVFEALSELII 155
Query: 195 DVIGSTAFGIEINSLENPDSEFRQVSLLVMKPSVLQMLKAVLSELIPLIKYLNLKIFDPR 254
G EI + + Q+ + +L +PL +
Sbjct: 156 LTASHCLHGKEIR--SQLNEKVAQLYADLDGG--FSHAAWLLPGWLPLPSFRRRDRAHRE 211
Query: 255 ISQFFSNLVKTNLSYREKNNIKRDDFLNIMMQLQIAQRGKTLSPDDVEMTDDVITAQSFV 314
I F ++ R ++ K DD L ++ G+ L+ D E+ +I
Sbjct: 212 IKDIFYKAIQK----RRQSQEKIDDILQTLLDATYKD-GRPLT--DDEVAGMLIG----- 259
Query: 315 FFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMA-TKKKEGELTYEICHKMSYLDKVT 373
G TSS+ + + LAR+ +Q K E + LTY+ ++ LD+
Sbjct: 260 LLLAGQHTSSTTSAWMGFFLARDKTLQKKCYLEQKTVCGENLPPLTYDQLKDLNLLDRCI 319
Query: 374 KEALRMYPSLPQLDR-----ISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPEYYPDPEK 428
KE LR+ P + + R +V Y +P G ++ + + + +
Sbjct: 320 KETLRLRPPIMIMMRMARTPQTVAGYTIP-------PGHQVCVSPTVNQRLKDSWVERLD 372
Query: 429 FDPERFSPENIESRPHYTYLPFGDGPRNCIGMRFGTIQFKIGLAQLISNFEFSIDS 484
F+P+R+ +N S + Y+PFG G CIG F +Q K + ++ +EF +
Sbjct: 373 FNPDRYLQDNPASGEKFAYVPFGAGRHRCIGENFAYVQIKTIWSTMLRLYEFDLID 428
>3dax_A Cytochrome P450 7A1; cholesterol, cholesterol 7-alpha hydroxylase,
structural genomics, structural genomics consortium,
SGC, cholesterol metabolism; HET: HEM; 2.15A {Homo
sapiens} PDB: 3sn5_A*
Length = 491
Score = 258 bits (660), Expect = 2e-80
Identities = 69/438 (15%), Positives = 148/438 (33%), Gaps = 46/438 (10%)
Query: 80 YGGLYHLM---TPKLMVTDPELYKYILIKDFDHFVDRGIGESDAKRDPIEGHLFGSKGEY 136
+G ++ +T+P Y +L +F + + + + + G
Sbjct: 46 HGHVFTCKLMGKYVHFITNPLSYHKVLCHG-KYFDWKKFHFATSAKAFGHRSIDPMDGNT 104
Query: 137 WKRLRNKLSPTFTSGKIKYMFPLI-KKCSDQLITTIRKQIGESKQMSLEVKDYCARYTTD 195
+ + + T + + + + + + + ++ + +C R +
Sbjct: 105 TENINDTFIKTLQGHALNSLTESMMENLQRIMRPPVSSNSKTAAWVTEGMYSFCYRVMFE 164
Query: 196 VIGSTAFGIEINSLENPDSEFRQVSLLVMKPSVLQMLKAVLSELIPLIKYLNLKIFDPRI 255
T FG ++ + + L K L+ L + +F
Sbjct: 165 AGYLTIFGRDLTRRDTQKAHILNN---------LDNFKQFDKVFPALVAGLPIHMF-RTA 214
Query: 256 SQFFSNLVKTNLSYREKNNIKRDDFLNIMMQLQIAQRGKTLSPDDVEMTDDVITAQSFVF 315
L ++ + + +++ M L D V
Sbjct: 215 HNAREKLAESLRHENLQKRESISELISLRMFLND---------TLSTFDDLEKAKTHLVV 265
Query: 316 FFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGE----------LTYEICHK 365
+ + + L+++ RNP+ +E+ T + G+ L+ +
Sbjct: 266 LWASQANTIPATFWSLFQMIRNPEAMKAATEEVKRTLENAGQKVSLEGNPICLSQAELND 325
Query: 366 MSYLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLTLDV--GTKISIPTFAIHYDPEYY 423
+ LD + KE+LR+ + + R + + + L D + ++ I++ +H DPE Y
Sbjct: 326 LPVLDSIIKESLRLSSASLNI-RTAKEDFTLHLEDGSYNIRKDDIIALYPQLMHLDPEIY 384
Query: 424 PDPEKFDPERFSPENIESR---------PHYTYLPFGDGPRNCIGMRFGTIQFKIGLAQL 474
PDP F +R+ EN +++ Y Y+PFG G C G F + K L +
Sbjct: 385 PDPLTFKYDRYLDENGKTKTTFYCNGLKLKYYYMPFGSGATICPGRLFAIHEIKQFLILM 444
Query: 475 ISNFEFSIDSANATFEYL 492
+S FE + A L
Sbjct: 445 LSYFELELIEGQAKCPPL 462
>2cib_A Cytochrome P450 51; heme, heme lipid synthesis, metal-binding,
monooxygenase, NADP, oxidoreductase, protein-inhibitor
complex; HET: HEM CM6; 1.50A {Mycobacterium
tuberculosis} SCOP: a.104.1.1 PDB: 2bz9_A* 1x8v_A*
2ci0_A* 2vku_A* 2w09_A* 2w0b_A* 2w0a_A* 1h5z_A* 1ea1_A*
1e9x_A* 1u13_A*
Length = 455
Score = 252 bits (647), Expect = 6e-79
Identities = 69/435 (15%), Positives = 153/435 (35%), Gaps = 50/435 (11%)
Query: 80 YGGLYHLM---TPKLMVTDPELYKYILIKDFDHFVDRGIGESDAKRDPIEGHLFGSK--- 133
G + ++++ ++ D P +FG
Sbjct: 37 LGDVGTFQLAGKQVVLLSGSHANEFFFRAGDDDLDQAKAY-------PFMTPIFGEGVVF 89
Query: 134 -GEYWKRLRNKLSPTFTSGKIKYMFPLIKKCSDQLITTIRKQIGESKQMSLEVKDYCARY 192
+R + ++K I+ ++I +++ D+ A
Sbjct: 90 DASPERRKEMLHNAALRGEQMKGHAATIEDQVRRMIA--DWGEAGE----IDLLDFFAEL 143
Query: 193 TTDVIGSTAFGIEINSLENPDSEFRQVSLLVMKPSVLQMLKAVLSELIPLIKYLNLKIFD 252
T + G + + D F ++ + + + A + +P+ +
Sbjct: 144 TIYTSSACLIGKKFR--DQLDGRFAKLYHELERGTDPL---AYVDPYLPIESFRRRDEAR 198
Query: 253 PRISQFFSNLVKTNLSYRE--KNNIKRDDFLNIMMQLQIAQRGKTLSPDDVEMTDDVITA 310
+ ++++ + D L++++ ++ S E+T I+
Sbjct: 199 NGLVALVADIMN---GRIANPPTDKSDRDMLDVLIAVKAETGTPRFS--ADEITGMFIS- 252
Query: 311 QSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSYLD 370
F G+ TSS ++ L EL R+ D + + E+ +++ ++ L+
Sbjct: 253 ----MMFAGHHTSSGTASWTLIELMRHRDAYAAVIDELDELYGDGRSVSFHALRQIPQLE 308
Query: 371 KVTKEALRMYPSLPQLDR-----ISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPEYYPD 425
V KE LR++P L L R V+ +++ G ++ + PE +PD
Sbjct: 309 NVLKETLRLHPPLIILMRVAKGEFEVQGHRIH-------EGDLVAASPAISNRIPEDFPD 361
Query: 426 PEKFDPERFSPENIESRPH-YTYLPFGDGPRNCIGMRFGTIQFKIGLAQLISNFEFSIDS 484
P F P R+ E + +T++PFG G C+G F +Q K + L+ +EF +
Sbjct: 362 PHDFVPARYEQPRQEDLLNRWTWIPFGAGRHRCVGAAFAIMQIKAIFSVLLREYEFEMAQ 421
Query: 485 ANATFEYLKGSILLQ 499
++ +++Q
Sbjct: 422 PPESYRNDHSKMVVQ 436
>2ve3_A Putative cytochrome P450 120; oxidoreductase, monooxygenase,
metal-binding, heme, iron; HET: HEM REA; 2.10A
{Synechocystis SP} PDB: 2ve4_A*
Length = 444
Score = 251 bits (642), Expect = 3e-78
Identities = 87/418 (20%), Positives = 161/418 (38%), Gaps = 59/418 (14%)
Query: 80 YGGLYH---LMTPKLMVTDPELYKYILIKDFDHFVDRGIGESDAKRDPIEGH-LFGSKGE 135
+G ++ + ++ +++ K+ + F + R + + L GE
Sbjct: 43 FGPIFKTRLFGKNVIFISGALANRFLFTKEQETFQ---ATWPLSTRILLGPNALATQMGE 99
Query: 136 YWKRLRNKLSPTFTSGKIKYMFPLIKKCSDQLITTIRKQIGESKQMSLEVKDYCARYTTD 195
+ R L F + P + + K + R T D
Sbjct: 100 IHRSRRKILYQAFLPRTLDSYLPKMDGIVQGYLEQW------GKANEVIWYPQLRRMTFD 153
Query: 196 VIGSTAFGIEINSLENPDSEFRQVSLLVMKPSVLQMLKAVLSELIPL-----IKYLNLKI 250
V + G +++ F ++ + S IPL K +
Sbjct: 154 VAATLFMGEKVSQNPQLFPWFET------------YIQGLFSLPIPLPNTLFGKSQRAR- 200
Query: 251 FDPRISQFFSNLVKTNLSYREKNNIKRDDFLNIMMQLQIAQRGKTLSPDDVEMTDDVITA 310
+ ++K R++ +D L I++ ++ ++ +
Sbjct: 201 --ALLLAELEKIIKA----RQQQPPSEEDALGILLA--------ARDDNNQPLSLPELKD 246
Query: 311 QSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSYLD 370
Q + F G+ET +S L+ L ++ DI+ ++RQE + + ELT E KM YLD
Sbjct: 247 QILLLLFAGHETLTSALSSFCLLLGQHSDIRERVRQEQNKLQLSQ-ELTAETLKKMPYLD 305
Query: 371 KVTKEALRMYPSLPQLDR-----ISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPEYYPD 425
+V +E LR+ P + R + + P G +S H DP+ YPD
Sbjct: 306 QVLQEVLRLIPPVGGGFRELIQDCQFQGFHFP-------KGWLVSYQISQTHADPDLYPD 358
Query: 426 PEKFDPERFSPENIESRPH-YTYLPFGDGPRNCIGMRFGTIQFKIGLAQLISNFEFSI 482
PEKFDPERF+P+ + + ++PFG G R C+G F ++ K+ +LI F++++
Sbjct: 359 PEKFDPERFTPDGSATHNPPFAHVPFGGGLRECLGKEFARLEMKLFATRLIQQFDWTL 416
>3b6h_A Prostacyclin synthase; enzyme-inhibitor complex, CYP8A1, cytochrome
P450, endoplasmic reticulum, fatty acid biosynthesis,
heme, iron, isomerase; HET: BOG MXD HEM; 1.62A {Homo
sapiens} PDB: 2iag_A*
Length = 498
Score = 250 bits (639), Expect = 2e-77
Identities = 65/439 (14%), Positives = 141/439 (32%), Gaps = 56/439 (12%)
Query: 82 GLYHLMTPKLMVTDPELYKYILIKDFDHFVDRGIGESDAKRDPIEGHLFGSK------GE 135
+ ++ DP Y ++ + + +F + +
Sbjct: 56 TILVGGRYVTVLLDPHSYDAVVWEPRTRLDFHAY------AIFLMERIFDVQLPHYSPSD 109
Query: 136 YWKRLRNKLSPTFTSGKIKYMFPLIKKCSDQLITTIRKQIGESKQMSLEVKDYCARYTTD 195
R++ L + M+ L+ + +M + D+ +
Sbjct: 110 EKARMKLTLLHRELQALTEAMY---TNLHAVLLGDATEAGSGWHEM--GLLDFSYSFLLR 164
Query: 196 VIGSTAFGIEINSLENPD-SEFRQVSLLVMKPSVLQMLKAVLSELIPLIKYLNLKIFD-P 253
T +GIE + ++ R S V L L+P + +L + D
Sbjct: 165 AGYLTLYGIEALPRTHESQAQDRVHSADVFHTFRQ------LDRLLPKLARGSLSVGDKD 218
Query: 254 RISQFFSNLVKTNLSYREKNNIKRDDFLNIMMQLQIAQRGKTLSPDDVEMTDDVITAQSF 313
+ S L K R R +L + +++ +++++
Sbjct: 219 HMCSVKSRLWKLLSPARLARRAHRSKWLESYLLHL----------EEMGVSEEMQARALV 268
Query: 314 VFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGE-------LTYEICHKM 366
+ + + L L +NP+ + +R E+ + + + L ++
Sbjct: 269 LQLWATQGNMGPAAFWLLLFLLKNPEALAAVRGELESILWQAEQPVSQTTTLPQKVLDST 328
Query: 367 SYLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDL---TLDVGTKISI-PTFAIHYDPEY 422
LD V E+LR+ + + R V +P D L G ++ + P + DPE
Sbjct: 329 PVLDSVLSESLRLTAAPF-ITREVVVDLAMPMADGREFNLRRGDRLLLFPFLSPQRDPEI 387
Query: 423 YPDPEKFDPERFSPENIESRPH---------YTYLPFGDGPRNCIGMRFGTIQFKIGLAQ 473
Y DPE F RF + + +P+G G +C+G + K +
Sbjct: 388 YTDPEVFKYNRFLNPDGSEKKDFYKDGKRLKNYNMPWGAGHNHCLGRSYAVNSIKQFVFL 447
Query: 474 LISNFEFSIDSANATFEYL 492
++ + + + +A+
Sbjct: 448 VLVHLDLELINADVEIPEF 466
>1n97_A CYP175A1; electron transport; HET: SRT HEM; 1.80A {Thermus
thermophilus} SCOP: a.104.1.1 PDB: 1wiy_A*
Length = 389
Score = 240 bits (614), Expect = 7e-75
Identities = 71/398 (17%), Positives = 122/398 (30%), Gaps = 82/398 (20%)
Query: 88 TPKLMVTDPELYKYILIKDFDHFVDRGIGESDAKRDPIEGH-LFGSKGEYWKRLRNKLSP 146
P ++ DPE + L+ + + G L GE WK R L
Sbjct: 41 FPLALIFDPEGVEGALLAEGTTKATFQYRA----LSRLTGRGLLTDWGESWKEARKALKD 96
Query: 147 TFTSGKIKYMFPLIKKCSDQLITTIRKQIGESKQMSLEVKDYCARYTTDVIGSTAFGIEI 206
F ++ +++ + R + ++ + ++G FG +
Sbjct: 97 PFLPKNVRGYREAMEEEARAFFGEWRGE-------ERDLDHEMLALSLRLLGRALFGKPL 149
Query: 207 NSLENPDSEFRQVSLLVMKPSVLQMLKAVLSELIPLIKYLNLKIFDPRISQFFSNLVKTN 266
+ L+ L ++++ + L+L
Sbjct: 150 ------SPSLAE--------HALKALDRIMAQTRSPLALLDL---------------AAE 180
Query: 267 LSYREKNNIKRDDFLNIMMQLQIAQRGKTLSPDDVEMTDDVITAQSFVFFFGGYETSSSV 326
+R+ R L + L + +T G+ET +S
Sbjct: 181 ARFRK----DRGALYREAEALIVHPPLSHLP--RERALSEAVT-----LLVAGHETVASA 229
Query: 327 LTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSYLDKVT---KEALRMYPSL 383
LT+ L+ PD Q ++ + + +EALR+YP
Sbjct: 230 LTWSFLLLSHRPDWQKRVAESE---------------------EAALAAFQEALRLYPPA 268
Query: 384 PQLDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPEYYPDPEKFDPERFSPENIESRP 443
L R + L + L GT + + + +PD E F PERF E P
Sbjct: 269 WILTRRLERPLLLG--EDRLPPGTTLVLSPYVTQRLH--FPDGEAFRPERFLEER--GTP 322
Query: 444 HYTYLPFGDGPRNCIGMRFGTIQFKIGLAQLISNFEFS 481
Y PFG G R C+G F ++ I L F
Sbjct: 323 SGRYFPFGLGQRLCLGRDFALLEGPIVLRAFFRRFRLD 360
>3gw9_A Sterol 14alpha-demethylase; CYP51, cytochrome P450, heme,
oxidoreductase, monooxygenase, sterol biosynthesis,
lipids, endoplasmic reticulum; HET: HEM VNI; 1.87A
{Trypanosoma brucei} PDB: 3g1q_A* 3p99_A* 2wv2_A*
2x2n_A* 3khm_A* 3k1o_A* 3ksw_A* 2wx2_A* 2wuz_A* 3l4d_A*
Length = 450
Score = 237 bits (606), Expect = 6e-73
Identities = 76/426 (17%), Positives = 150/426 (35%), Gaps = 67/426 (15%)
Query: 80 YGGLYH---LMTPKLMVTDPELYKYILIKDFDHFVDRGIGESDAKRDPI--EGHLFGSKG 134
G++ + +V DP + + + S P+ EG + +
Sbjct: 37 KSGIFTINIVGKRVTIVGDPHEHSRFFLPRNEVL-SPREVYSFMV--PVFGEGVAYAAPY 93
Query: 135 EYWKRLRNKLSPTFTSGKIKYMFPLIKKCSDQLITTIRKQIGESKQMSLEVKDYCARYTT 194
+ N L+ T K + P I+ + + + + + + + C+
Sbjct: 94 PRMREQLNFLAEELTIAKFQNFVPAIQHEVRKFMAANWDK----DEGEINLLEDCSTMII 149
Query: 195 DVIGSTAFGIEINSLENPDSEFRQVSLLVMKPSVLQMLKAVLSELIPLIKYLNLKIFDP- 253
+ FG ++ + Q+L + S LIP +L + + P
Sbjct: 150 NTACQCLFGEDLRKRLDARR-------------FAQLLAKMESSLIPAAVFLPILLKLPL 196
Query: 254 -----------RISQFFSNLVKTNLSYREKNNIKRDDFLNIMMQLQIAQRGKTLSPDDVE 302
+ + S ++ + D L+ ++ G +S E
Sbjct: 197 PQSARCHEARTELQKILSEIIIARKEEEVNKDSSTSDLLSGLLSAVYRD-GTPMS--LHE 253
Query: 303 MTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQS--KLRQEIMATKKKEGELTY 360
+ ++ F G TSS T+ + L +++ LR+EI +
Sbjct: 254 VCGMIVA-----AMFAGQHTSSITTTWSMLHLMHPANVKHLEALRKEIEEFPAQLN--YN 306
Query: 361 EICHKMSYLDKVTKEALRMYPSLPQLDR-----ISVKKYKLPNTDLTLDVGTKISIPTFA 415
+ +M + ++ +E++R P L L R + V Y +P G I+
Sbjct: 307 NVMDEMPFAERCARESIRRDPPLLMLMRKVMADVKVGSYVVP-------KGDIIACSPLL 359
Query: 416 IHYDPEYYPDPEKFDPERFSPENIESRPHYTYLPFGDGPRNCIGMRFGTIQFKIGLAQLI 475
H+D E +P+P ++DPER + ++ FG G CIG +FG +Q K LA
Sbjct: 360 SHHDEEAFPEPRRWDPERDE------KVEGAFIGFGAGVHKCIGQKFGLLQVKTILATAF 413
Query: 476 SNFEFS 481
+++F
Sbjct: 414 RSYDFQ 419
>1izo_A P450bsbeta, cytochrome P450 152A1; heme protein, protein-fatty acid
complex, riken structural genomics/proteomics
initiative, RSGI; HET: HEM PAM; 2.10A {Bacillus
subtilis} SCOP: a.104.1.1 PDB: 2zqj_A* 2zqx_A*
Length = 417
Score = 209 bits (534), Expect = 9e-63
Identities = 60/406 (14%), Positives = 112/406 (27%), Gaps = 68/406 (16%)
Query: 86 LMTPKLMVTDPELYKYILIKDFDHFVDRGIGESDAKRDPIEGHLFGSKGEYWKRLRNKLS 145
L + +T E K D + + K + G G +
Sbjct: 42 LGKNFICMTGAEAAKVFYDTD-RFQRQNALPKRVQKSLFGVNAIQGMDGSAHIHRKMLFL 100
Query: 146 PTFTSGKIKYMFPLIKKCSDQLITTIRKQIGESKQMSLEVKDYCARYTTDVIGSTAFGIE 205
T K + L+ + +T K + + + V A
Sbjct: 101 SLMTPPHQKRLAELMTEEWKAAVTRWEKAD------EVVLFEEAKEILCRVACYWAGVPL 154
Query: 206 INSLENPDSEFRQVSLLVMKPSVLQMLKAVLSELIPLIKYLNLKIFDPRISQFFSNLVKT 265
++E ++ + + M+ A + K + PR ++ +++
Sbjct: 155 ------KETEVKERA-----DDFIDMVDAFGAVGPRHWKGRRAR---PRAEEWIEVMIED 200
Query: 266 NLSYREKNNIKRDDFLNIMMQLQIAQRGKTLSPDDVEMTDDVITAQSFVFFFGGYETSSS 325
+ K L+ M +D D + A + S
Sbjct: 201 ARAGLLKT--TSGTALHEMAFHT---------QEDGSQLDSRMAAIELINVLRPIVAISY 249
Query: 326 VLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSYLDKVTKEALRMYPSLPQ 385
L F L +P + LR + +E R YP P
Sbjct: 250 FLVFSALALHEHPKYKEWLRSG-----------------NSREREMFVQEVRRYYPFGPF 292
Query: 386 LDRISVKK-----YKLPNTDLTLDVGTKISIPTFAIHYDPEYYPDPEKFDPERFSPENIE 440
L + K + GT + + + ++DP + P++F PERF+
Sbjct: 293 LGALVKKDFVWNNCEFKK-------GTSVLLDLYGTNHDPRLWDHPDEFRPERFAERE-- 343
Query: 441 SRPHYTYLPFGDGP----RNCIGMRFGTIQFKIGLAQLISNFEFSI 482
+ +P G G C G K L L+ E+ +
Sbjct: 344 -ENLFDMIPQGGGHAEKGHRCPGEGITIEVMKASLDFLVHQIEYDV 388
>3b98_A Prostaglandin I2 synthase; prostacyclin synthase, cytochrome P450
8A1, CYP8A1, isomerase; HET: HEM; 2.08A {Danio rerio}
PDB: 3b99_A*
Length = 475
Score = 195 bits (497), Expect = 9e-57
Identities = 59/426 (13%), Positives = 130/426 (30%), Gaps = 62/426 (14%)
Query: 80 YGGLYHL---MTPKLMVTDPELYKYILIKDFDHFVDRGIGESDAKRDPIEGHLFGSKGEY 136
+G ++ + ++ D Y +L D + K I + S
Sbjct: 51 HGDIFTVRAAGLYITVLLDSNCYDAVL-SDVASLDQTSYAQVLMK--RIFNMILPSHNPE 107
Query: 137 WKRLRNKLSPTFTSGKIKYMFPLIKKCSDQLITTIRKQIGESKQMSLEVKDYCARYTTDV 196
++ R ++ F + + ++ L+T + S+ + + C
Sbjct: 108 SEKKRAEM--HFQGASLTQLSNSMQNNLRLLMTPSEMGLKTSEWKKDGLFNLCYSLLFKT 165
Query: 197 IGSTAFGIEINSLENPDSEFRQVSLLVMKPSVLQMLKAVLSELIPLIKYLNL-KIFDPRI 255
T FG E N+ + Q+ + +L+P + + K
Sbjct: 166 GYLTVFGAENNN----SAALTQIYEEFRR----------FDKLLPKLARTTVNKEEKQIA 211
Query: 256 SQFFSNLVKTNLSYREKNNIKRDDFLNIMMQLQIAQRGKTLSPDDVEMTDDVITAQSFVF 315
S L K + +L ++ D + ++ +
Sbjct: 212 SAAREKLWKWLTPSGLDRKPREQSWLGSYVKQL----------QDEGIDAEMQRRAMLLQ 261
Query: 316 FFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSYLDKVTKE 375
+ + + + L +P+ +R+EI + + E D V E
Sbjct: 262 LWVTQGNAGPAAFWVMGYLLTHPEALRAVREEI---QGGKHLRLEERQKNTPVFDSVLWE 318
Query: 376 ALRMYPSLP---------QLDRISVKKYKLPNTDLTLDVGTKISI-PTFAIHYDPEYYPD 425
LR+ + ++ + ++Y L G ++ + P + DP+ +
Sbjct: 319 TLRLTAAALITRDVTQDKKICLSNGQEYHLR-------RGDRLCVFPFISPQMDPQIHQQ 371
Query: 426 PEKFDPERFSPENIES---------RPHYTYLPFGDGPRNCIGMRFGTIQFKIGLAQLIS 476
PE F +RF + R Y +P+G C G F K + +++
Sbjct: 372 PEMFQFDRFLNADRTEKKDFFKNGARVKYPSVPWGTEDNLCPGRHFAVHAIKELVFTILT 431
Query: 477 NFEFSI 482
F+ +
Sbjct: 432 RFDVEL 437
>3awm_A Fatty acid alpha-hydroxylase; cytochrome P450, peroxygenase,
oxidoreductase; HET: HEM PLM; 1.65A {Sphingomonas
paucimobilis} PDB: 3awq_A* 3awp_A*
Length = 415
Score = 181 bits (462), Expect = 2e-52
Identities = 49/415 (11%), Positives = 121/415 (29%), Gaps = 69/415 (16%)
Query: 86 LMTPKLMVTDPELYKYILIKDFDHFVDRGIGESDAKRDPIEGHLFGSKGEYWKRLRNKLS 145
L+ + + + + + + K +G + G GE + +
Sbjct: 41 LLKKTNCLKGAKAAEIFYDTT-RFEREGAMPVAIQKTLLGQGGVQGLDGETHRHRKQMFM 99
Query: 146 PTFTSGKIKYMFPLIKKCSDQLITTIRKQIGESKQMSLEVKDYCARYTTDVIGSTAFGIE 205
T +++ + L + + + + E+ T + + A
Sbjct: 100 GLMTPERVRALAQLFEAEWRRAVPGWTR--KGEIVFYDELH----EPLTRAVCAWAGVPL 153
Query: 206 INSLENPDSEFRQVSLLVMKPSVLQMLKAVLSELIPLIKYLNLKIFDPRISQFFSNLVKT 265
PD E + + + A S + + R+ + +++
Sbjct: 154 ------PDDEAGNRA-----GELRALFDAAGSASPRHLWSRLARR---RVDAWAKRIIE- 198
Query: 266 NLSYREKNNIKRDDFLNIMMQLQIAQRGKTLSPDDVEMTDDVITAQSFVFFFGGYETSSS 325
R + + + ++ + A V +
Sbjct: 199 --GIRAGSIGSGSGTAAYAIAWHRDRHD--------DLLSPHVAAVELVNVLRPTVAIAV 248
Query: 326 VLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSYLDKVTKEALRMYPSLPQ 385
+TF + L I++ L Q+ Y + +E R YP P
Sbjct: 249 YITFVAHALQTCSGIRAALVQQ------------------PDYAELFVQEVRRFYPFFPA 290
Query: 386 LDRISVKKYKLPNTDLTLD-----VGTKISIPTFAIHYDPEYYPDPEKFDPERFSPENIE 440
+ + + D + G ++ + + ++D + DP++F PERF +
Sbjct: 291 VVARASQ-------DFEWEGMAFPEGRQVVLDLYGSNHDAATWADPQEFRPERFRAWD-- 341
Query: 441 SRPHYTYLPFGDGP----RNCIGMRFGTIQFKIGLAQLISNFEFSIDSANATFEY 491
+ ++P G G C G K+ L++ + + + + ++
Sbjct: 342 -EDSFNFIPQGGGDHYLGHRCPGEWIVLAIMKVAAHLLVNAMRYDVPDQDLSIDF 395
>3qz1_A Steroid 21-hydroxylase; P450 monooxygenase, oxidoreductase; HET:
HEM 3QZ; 3.00A {Bos taurus}
Length = 496
Score = 127 bits (322), Expect = 4e-32
Identities = 85/497 (17%), Positives = 165/497 (33%), Gaps = 72/497 (14%)
Query: 13 LVLCSLPLIFLFIKSIFNYRYWKNKNVFYFSPTFPF-GNYGAGFLSRITFHQMHCEFYNK 71
+VL L L+ + P + L + K
Sbjct: 1 MVLAGLLLLLTLLAGAHLLWGRWKLR---NLHLPPLVPGFL--HLLQPNLPIHLLSLTQK 55
Query: 72 IKYDLKLPYGGLYHL---MTPKLMVTDPELYKYILIKDFDHFVDRG---IGESDAKRDPI 125
G +Y L + +++ + +I+ + F R + ++R
Sbjct: 56 --------LGPVYRLRLGLQEVVVLNSKRTIEEAMIRKWVDFAGRPQIPSYKLVSQRC-- 105
Query: 126 EGHLFGSKGEYWKRLRNKLS-PTFTSGKIKYMFPLIKKCSDQLITTIRKQIGESKQMSLE 184
+ G WK + KL+ G M P + + + + +R Q G + E
Sbjct: 106 QDISLGDYSLLWKAHK-KLTRSALLLGTRSSMEPWVDQLTQEFCERMRVQAGAPVTIQKE 164
Query: 185 VKDYCARYTTDVIGSTAFGIEINSLENPDSEFRQVSLLVMKPSVLQMLKAVLSELIPLIK 244
T +I FG N + F +MK + +++P ++
Sbjct: 165 F--SLL--TCSIICYLTFG---NKEDTLVHAFHDCVQDLMK--TWDHWSIQILDMVPFLR 215
Query: 245 YL------NLKIFDPRISQFFSNLVKTNLSYREKNNIKRD--D-FLNIMMQLQIAQRGKT 295
+ LK ++ + RD D L + + +
Sbjct: 216 FFPNPGLWRLKQAIENRDHMVEKQLRRHKESMVAGQW-RDMTDYMLQGVGR-------QR 267
Query: 296 LSPDDVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMA---TK 352
+ ++ + + F GG ET++S L++ + L +P+IQ +L++E+
Sbjct: 268 VEEGPGQLLEGHVHMSVVDLFIGGTETTASTLSWAVAFLLHHPEIQRRLQEELDRELGPG 327
Query: 353 KKEGELTYEICHKMSYLDKVTKEALRMYPSLPQL-------DRISVKKYKLPNTDLTLDV 405
+TY+ ++ L+ E LR+ P +P S+ Y +P
Sbjct: 328 ASCSRVTYKDRARLPLLNATIAEVLRLRPVVPLALPHRTTRP-SSIFGYDIPE------- 379
Query: 406 GTKISIPTFAIHYDPEYYPDPEKFDPERFSPENIESRPHYTYLPFGDGPRNCIGMRFGTI 465
G + H D + P +F P+RF +E + + L FG G R C+G +
Sbjct: 380 GMVVIPNLQGAHLDETVWEQPHEFRPDRF----LEPGANPSALAFGCGARVCLGESLARL 435
Query: 466 QFKIGLAQLISNFEFSI 482
+ + LA+L+ F
Sbjct: 436 ELFVVLARLLQAFTLLP 452
>3pm0_A Cypib1, cytochrome P450 1B1; CYP1B1, monooxygenase,
alpha-naphthoflavone, 17BETA-estradiol, oxidoreductase;
HET: HEM BHF; 2.70A {Homo sapiens}
Length = 507
Score = 125 bits (316), Expect = 3e-31
Identities = 73/435 (16%), Positives = 151/435 (34%), Gaps = 50/435 (11%)
Query: 80 YGGLYHL---MTPKLMVTDPELYKYILIKDFDHFVDRGIGESDAKRDPIEGHLFGSKGEY 136
YG ++ + P +++ L++ F DR S FG E+
Sbjct: 41 YGDVFQIRLGSCPIVVLNGERAIHQALVQQGSAFADRPSFASFRVVSGGRSMAFGHYSEH 100
Query: 137 WKRLR-------NKLSPTFTSGKIKYMFPLIKKCSDQLITTIRKQIGESKQMSLEVKDYC 189
WK R + + + + + +L+ + + + +
Sbjct: 101 WKVQRRAAHSMMRNFFTRQPRSR-QVLEGHVLSEARELVALLVRGSADGAFLDPRPLTVV 159
Query: 190 ARYTTDVIGSTAFGIEINSLENPDSEFRQVSLLVMKPSVLQMLKAVLSELIPLIKYL--- 246
A +V+ + FG + D EFR++ L + + L +++P ++Y
Sbjct: 160 A--VANVMSAVCFG---CRYSHDDPEFREL-LSHNEEFGRTVGAGSLVDVMPWLQYFPNP 213
Query: 247 ------NLKIFDPRISQFFSNLVKTNLSYREKNNIKR---DDFLNIMMQLQIAQRGKTLS 297
+ + S F + + R D F+ + +
Sbjct: 214 VRTVFREFEQLNRNFSNFILDKFLRHCESLRPGAAPRDMMDAFILSAEK----KAAGDSH 269
Query: 298 PDDVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGE 357
+ + + A F +T S+ L + L R PD+Q++++ E+ ++
Sbjct: 270 GGGARLDLENVPATITDIFGASQDTLSTALQWLLLLFTRYPDVQTRVQAELDQVVGRDRL 329
Query: 358 LTYEICHKMSYLDKVTKEALRMYPSLPQL-------DRISVKKYKLPNTDLTLDVGTKIS 410
+ Y+ EA+R +P + SV Y +P T +
Sbjct: 330 PCMGDQPNLPYVLAFLYEAMRFSSFVPVTIPHATTAN-TSVLGYHIPK-------DTVVF 381
Query: 411 IPTFAIHYDPEYYPDPEKFDPERFSPEN--IESRPHYTYLPFGDGPRNCIGMRFGTIQFK 468
+ +++++DP +P+PE FDP RF ++ I + F G R CIG +Q
Sbjct: 382 VNQWSVNHDPLKWPNPENFDPARFLDKDGLINKDLTSRVMIFSVGKRRCIGEELSKMQLF 441
Query: 469 IGLAQLISNFEFSID 483
+ ++ L +F +
Sbjct: 442 LFISILAHQCDFRAN 456
>3swz_A Steroid 17-alpha-hydroxylase/17,20 lyase; cytochrome P450, CYP17A1,
P450C17, P450 17A1, monooxyg 17A-hydroxylase, heme
protein; HET: HEM TOK; 2.40A {Homo sapiens} PDB: 3ruk_A*
Length = 494
Score = 124 bits (315), Expect = 4e-31
Identities = 96/406 (23%), Positives = 168/406 (41%), Gaps = 47/406 (11%)
Query: 80 YGGLYHL---MTPKLMVTDPELYKYILIKDFDHFVDRGIGES-DAKRDPIEGHLFGSKGE 135
YG +Y + ++V +L K +LIK F R + D + +G F G
Sbjct: 42 YGPIYSVRMGTKTTVIVGHHQLAKEVLIKKGKDFSGRPQMATLDIASNNRKGIAFADSGA 101
Query: 136 YWKRLRNKLSPT----FTSGKIKYMFPLIKKCSDQLITTIRKQIGESKQMSLEVKDYCAR 191
+W+ R +L+ F G + + +I + L + G+S +S V + A
Sbjct: 102 HWQLHR-RLAMATFALFKDGD-QKLEKIICQEISTLCDMLATHNGQSIDISFPV--FVA- 156
Query: 192 YTTDVIGSTAFGIEINSLENPDSEFRQVSLLVMKPSVLQMLKAVLSELIPLIKYL----- 246
T+VI F S +N D E + + + + K L +L+P +K
Sbjct: 157 -VTNVISLICFN---TSYKNGDPELNVI-QNYNEGIIDNLSKDSLVDLVPWLKIFPNKTL 211
Query: 247 -NLKIFDPRISQFFSNLVKTNLSYREKNNIKRD--D-FLNIMMQLQIAQRGKTLSPDDVE 302
LK + + +++ ++I + D + M D
Sbjct: 212 EKLKSHVKIRNDLLNKILENYKEKFRSDSI-TNMLDTLMQAKMNSD--NGNAGPDQDSEL 268
Query: 303 MTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEI 362
++D+ I F G ET++SV+ + L L NP ++ KL +EI T
Sbjct: 269 LSDNHILTTIGDIFGAGVETTTSVVKWTLAFLLHNPQVKKKLYEEIDQNVGFSRTPTISD 328
Query: 363 CHKMSYLDKVTKEALRMYPSLPQL-------DRISVKKYKLPNTDLTLDVGTKISIPTFA 415
+++ L+ +E LR+ P P L D S+ ++ + GT++ I +A
Sbjct: 329 RNRLLLLEATIREVLRLRPVAPMLIPHKANVD-SSIGEFAVDK-------GTEVIINLWA 380
Query: 416 IHYDPEYYPDPEKFDPERF-SPE-NIESRPHYTYLPFGDGPRNCIG 459
+H++ + + P++F PERF +P P +YLPFG GPR+CIG
Sbjct: 381 LHHNEKEWHQPDQFMPERFLNPAGTQLISPSVSYLPFGAGPRSCIG 426
>3czh_A Cytochrome P450 2R1; vitamin D, vitamin S 25-hydroxylase, drug
metabolism, structural genomics, structural genomics
consortium, SGC; HET: BCD HEM D2V; 2.30A {Homo sapiens}
SCOP: a.104.1.1 PDB: 2ojd_A* 3c6g_A* 3dl9_A*
Length = 481
Score = 122 bits (309), Expect = 2e-30
Identities = 84/426 (19%), Positives = 155/426 (36%), Gaps = 48/426 (11%)
Query: 80 YGGLYHL---MTPKLMVTDPELYKYILIKDFDHFVDRGIGESDAKRDPIEGHLFGSKGEY 136
YG ++ L +++ ++ K L+ + F DR K + G L G
Sbjct: 47 YGEIFSLDLGGISTVVLNGYDVVKECLVHQSEIFADRPCLPLFMKMTKMGGLLNSRYGRG 106
Query: 137 WKRLRNKLSPT----FTSGKIKYMFPLIKKCSDQLITTIRKQIGESKQMSLEVKDYCARY 192
W R +L+ F G+ K I + + I G + A
Sbjct: 107 WVDHR-RLAVNSFRYFGYGQ-KSFESKILEETKFFNDAIETYKGRPFDFKQLI--TNA-- 160
Query: 193 TTDVIGSTAFGIEINSLENPDSEFRQVSLLVMKPSVLQ-MLKAVLSELIPLIKYL----N 247
+++ FG D++F+ + L + L L P I L +
Sbjct: 161 VSNITNLIIFG---ERFTYEDTDFQHMIELFSENVELAASASVFLYNAFPWIGILPFGKH 217
Query: 248 LKIFDP--RISQFFSNLVKTNLSYREKNNIKRD--DFLNIMMQLQIAQRGKTLSPDDVEM 303
++F + F S L++ R+ + D M + +
Sbjct: 218 QQLFRNAAVVYDFLSRLIEKASVNRKPQLP-QHFVDAYLDEMD-------QGKNDPSSTF 269
Query: 304 TDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEIC 363
+ + + G ET+++VL + + +A P+IQ ++++EI G+ +++
Sbjct: 270 SKENLIFSVGELIIAGTETTTNVLRWAILFMALYPNIQGQVQKEIDLIMGPNGKPSWDDK 329
Query: 364 HKMSYLDKVTKEALRMYPSLPQL-------DRISVKKYKLPNTDLTLDVGTKISIPTFAI 416
KM Y + V E LR +P D V+ Y +P GT + +++
Sbjct: 330 CKMPYTEAVLHEVLRFCNIVPLGIFHATSED-AVVRGYSIPK-------GTTVITNLYSV 381
Query: 417 HYDPEYYPDPEKFDPERFSPENIESRPHYTYLPFGDGPRNCIGMRFGTIQFKIGLAQLIS 476
H+D +Y+ DPE F PERF + +PF G R+C+G ++ + L+
Sbjct: 382 HFDEKYWRDPEVFHPERFLDSSGYFAKKEALVPFSLGRRHCLGEHLARMEMFLFFTALLQ 441
Query: 477 NFEFSI 482
F
Sbjct: 442 RFHLHF 447
>3tbg_A Cytochrome P450 2D6; monooxygenase, thioridazine, oxidoreductase;
HET: RTZ HEM; 2.10A {Homo sapiens} PDB: 3qm4_A* 2f9q_A*
Length = 479
Score = 119 bits (301), Expect = 2e-29
Identities = 83/463 (17%), Positives = 153/463 (33%), Gaps = 60/463 (12%)
Query: 46 FPF-GNYGAGFLSRITFHQMHCEFYNKIKYDLKLPYGGLYHL---MTPKLMVTDPELYKY 101
P GN L + F F L+ +G ++ L TP +++ +
Sbjct: 18 LPGLGN-----LLHVDFQNTPYCFDQ-----LRRRFGDVFSLQLAWTPVVVLNGLAAVRE 67
Query: 102 ILIKDFDHFVDRG---IGESDAKRDPIEGHLFGSKGEYWKRLRNKLSPT----FTSGKIK 154
L+ + DR I + +G G W+ R + S + GK K
Sbjct: 68 ALVTHGEDTADRPPVPITQILGFGPRSQGVFLARYGPAWREQR-RFSVSTLRNLGLGK-K 125
Query: 155 YMFPLIKKCSDQLITTIRKQIGESKQMSLEVKDYCARYTTDVIGSTAFGIEINSLENPDS 214
+ + + + L G + + + A ++VI S G E D
Sbjct: 126 SLEQWVTEEAACLCAAFANHSGRPFRPNGLL--DKA--VSNVIASLTCG---RRFEYDDP 178
Query: 215 EFRQ-VSLLVMKPSVLQMLKAVLSELIPLIKYL---NLKIFDP--RISQFFSNLVKTNLS 268
F + + L + +P++ ++ K+ L+ +
Sbjct: 179 RFLRLLDLAQEGLKEESGFLREVLNAVPVLLHIPALAGKVLRFQKAFLTQLDELLTEHRM 238
Query: 269 YREKNNIKRD--DFLNIMMQLQIAQRGKTLSPDDVEMTDDVITAQSFVFFFGGYETSSSV 326
+ RD + M+ K + D+ + F G T+S+
Sbjct: 239 TWDPAQPPRDLTEAFLAEME-------KAKGNPESSFNDENLRIVVADLFSAGMVTTSTT 291
Query: 327 LTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSYLDKVTKEALRMYPSLPQL 386
L + L + +PD+Q +++QEI + M Y V E R +P
Sbjct: 292 LAWGLLLMILHPDVQRRVQQEIDDVIGQVRRPEMGDQAHMPYTTAVIHEVQRFGDIVPLG 351
Query: 387 -------DRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPEYYPDPEKFDPERFSPENI 439
D I V+ +++P GT + ++ D + P +F PE F
Sbjct: 352 VTHMTSRD-IEVQGFRIPK-------GTTLITNLSSVLKDEAVWEKPFRFHPEHFLDAQG 403
Query: 440 ESRPHYTYLPFGDGPRNCIGMRFGTIQFKIGLAQLISNFEFSI 482
+LPF G R C+G ++ + L+ +F FS+
Sbjct: 404 HFVKPEAFLPFSAGRRACLGEPLARMELFLFFTSLLQHFSFSV 446
>2hi4_A Cytochrome P450 1A2; CYP1A2, monooxygenase, drug metabolizing
enzyme, alpha-naphthoflavone, benzo(H)flavone, 7,8-
benzoflavone, oxidoreductase; HET: HEM BHF; 1.95A {Homo
sapiens}
Length = 495
Score = 119 bits (300), Expect = 4e-29
Identities = 85/438 (19%), Positives = 160/438 (36%), Gaps = 61/438 (13%)
Query: 80 YGGLYHL---MTPKLMVTDPELYKYILIKDFDHFVDRGIGESDAKRDPI-EGH---LFGS 132
YG + + TP L+++ + + L++ D F R + I +G
Sbjct: 48 YGDVLQIRIGSTPVLVLSRLDTIRQALVRQGDDFKGRPDLYT---STLITDGQSLTFSTD 104
Query: 133 KGEYWKRLRNKLSPT----FTSGK------IKYMFPLIKKCSDQLITTIRKQIGESKQMS 182
G W R +L+ F+ Y+ + K + LI+ +++ +
Sbjct: 105 SGPVWAARR-RLAQNALNTFSIASDPASSSSCYLEEHVSKEAKALISRLQELMAGPGHFD 163
Query: 183 LEVKDYCARYTTDVIGSTAFGIEINSLENPDSEFRQVSLLVMKPSVLQMLKAVLSELIPL 242
+ + +VIG+ FG E + + V + P+
Sbjct: 164 PYNQVVVS--VANVIGAMCFG---QHFPESSDEMLSL-VKNTHEFVETASSGNPLDFFPI 217
Query: 243 IKYL------NLKIFDPRISQFFSNLVKTNLSYREKNNIKRD--DFLNIMMQLQIAQRGK 294
++YL K F+ R F V+ + +KN++ RD L + K
Sbjct: 218 LRYLPNPALQRFKAFNQRFLWFLQKTVQEHYQDFDKNSV-RDITGALFKHSK-------K 269
Query: 295 TLSPDDVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKK 354
+ + I F G++T ++ +++ L L P+IQ K+++E+ +
Sbjct: 270 GPRASGNLIPQEKIVNLVNDIFGAGFDTVTTAISWSLMYLVTKPEIQRKIQKELDTVIGR 329
Query: 355 EGELTYEICHKMSYLDKVTKEALRMYPSLPQL-------DRISVKKYKLPNTDLTLDVGT 407
E ++ YL+ E R LP D ++ + +P
Sbjct: 330 ERRPRLSDRPQLPYLEAFILETFRHSSFLPFTIPHSTTRD-TTLNGFYIPK-------KC 381
Query: 408 KISIPTFAIHYDPEYYPDPEKFDPERFSPEN---IESRPHYTYLPFGDGPRNCIGMRFGT 464
+ + + +++DPE + DP +F PERF + I + FG G R CIG
Sbjct: 382 CVFVNQWQVNHDPELWEDPSEFRPERFLTADGTAINKPLSEKMMLFGMGKRRCIGEVLAK 441
Query: 465 IQFKIGLAQLISNFEFSI 482
+ + LA L+ EFS+
Sbjct: 442 WEIFLFLAILLQQLEFSV 459
>2fdv_A Cytochrome P450 2A6; CYP2A6, monooxygenase, drug metabolizing
enzyme, coumarin 7-hydroxylase, nicotine oxidase,
oxidoreductase; HET: HEM D2G; 1.65A {Homo sapiens} PDB:
1z11_A* 1z10_A* 2fdu_A* 2fdw_A* 2fdy_A* 3t3r_A* 2pg5_A*
2pg7_A* 2pg6_A* 3t3q_A* 3ebs_A* 2p85_A* 3t3s_A*
Length = 476
Score = 109 bits (274), Expect = 7e-26
Identities = 93/467 (19%), Positives = 180/467 (38%), Gaps = 72/467 (15%)
Query: 46 FPF-GNYGAGFLSRITFHQMHCEFYNKIKYDLKLPYGGLYHL---MTPKLMVTDPELYKY 101
PF GN ++ QM+ + YG ++ + +++ + +
Sbjct: 18 LPFIGN-----YLQLNTEQMYNSLMK-----ISERYGPVFTIHLGPRRVVVLCGHDAVRE 67
Query: 102 ILIKDFDHFVDRGIGESDAKRDPIEGHLFG------SKGEYWKRLRNKLSPT----FTSG 151
L+ + F RG +F S GE K+LR + S F G
Sbjct: 68 ALVDQAEEFSGRG-------EQATFDWVFKGYGVVFSNGERAKQLR-RFSIATLRDFGVG 119
Query: 152 KIKYMFPLIKKCSDQLITTIRKQIGESKQMSLEVKDYCARYTTDVIGSTAFGIEINSLEN 211
K + + I++ + LI +R G + + + ++VI S FG + +
Sbjct: 120 K-RGIEERIQEEAGFLIDALRGTGGANIDPTFFL--SRT--VSNVISSIVFG---DRFDY 171
Query: 212 PDSEFRQVSLLVMKPSVLQ--MLKAVLSELIPLIKYL---NLKIFDP--RISQFFSNLVK 264
D EF + +++ + ++K+L + F + F + V+
Sbjct: 172 KDKEFLSLLRMMLGIFQFTSTSTGQLYEMFSSVMKHLPGPQQQAFQLLQGLEDFIAKKVE 231
Query: 265 TNLSYREKNNIKRD--D-FLNIMMQLQIAQRGKTLSPDDVEMTDDVITAQSFVFFFGGYE 321
N + N+ RD D FL +++ + K + E + + F GG E
Sbjct: 232 HNQRTLDPNSP-RDFIDSFL-----IRMQEEEKN---PNTEFYLKNLVMTTLNLFIGGTE 282
Query: 322 TSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSYLDKVTKEALRMYP 381
T S+ L + L ++P++++K+ +EI K + +E KM Y++ V E R
Sbjct: 283 TVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRAKMPYMEAVIHEIQRFGD 342
Query: 382 SLPQ-LDR-----ISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPEYYPDPEKFDPERFS 435
+P L R + + LP GT++ ++ DP ++ +P+ F+P+ F
Sbjct: 343 VIPMSLARRVKKDTKFRDFFLPK-------GTEVYPMLGSVLRDPSFFSNPQDFNPQHFL 395
Query: 436 PENIESRPHYTYLPFGDGPRNCIGMRFGTIQFKIGLAQLISNFEFSI 482
E + + ++PF G RNC G ++ + ++ NF
Sbjct: 396 NEKGQFKKSDAFVPFSIGKRNCFGEGLARMELFLFFTTVMQNFRLKS 442
>1r9o_A Cytochrome P450 2C9; monooxygenase, drug metabolizing enzyme,
oxidoreductas; HET: HEM FLP; 2.00A {Homo sapiens} SCOP:
a.104.1.1 PDB: 1og5_A* 1og2_A* 2nnj_A* 1pq2_A* 2nni_A*
2nnh_A* 2vn0_A* 1nr6_A* 1dt6_A* 1n6b_A*
Length = 477
Score = 108 bits (272), Expect = 1e-25
Identities = 97/466 (20%), Positives = 175/466 (37%), Gaps = 72/466 (15%)
Query: 46 FPF-GNYGAGFLSRITFHQMHCEFYNKIKYDLKLPYGGLYHL---MTPKLMVTDPELYKY 101
P GN + +I + N L YG ++ L + P +++ E K
Sbjct: 19 LPVIGN-----ILQIGIKDISKSLTN-----LSKVYGPVFTLYFGLKPIVVLHGYEAVKE 68
Query: 102 ILIKDFDHFVDRGIGESDAKRDPIEGHLFG------SKGEYWKRLRNKLSPT----FTSG 151
LI + F RG P+ S G+ WK +R + S F G
Sbjct: 69 ALIDLGEEFSGRG-------IFPLAERANRGFGIVFSNGKKWKEIR-RFSLMTLRNFGMG 120
Query: 152 KIKYMFPLIKKCSDQLITTIRKQIGESKQMSLEVKDYCARYTTDVIGSTAFGIEINSLEN 211
K + + +++ + L+ +RK + + CA +VI S F +
Sbjct: 121 K-RSIEDRVQEEARCLVEELRKTKASPCDPTFIL--GCA--PCNVICSIIFH---KRFDY 172
Query: 212 PDSEFRQVSLLVMKPSVLQ--MLKAVLSELIPLIKYL---NLKIFDP--RISQFFSNLVK 264
D +F + + + + + + P+I Y + K+ + + VK
Sbjct: 173 KDQQFLNLMEKLNENIKILSSPWIQICNNFSPIIDYFPGTHNKLLKNVAFMKSYILEKVK 232
Query: 265 TNLSYREKNNIKRD--DFLNIMMQLQIAQRGKTLSPDDVEMTDDVITAQSFVFFFGGYET 322
+ + NN +D D + M+ K E T + + + F G ET
Sbjct: 233 EHQESMDMNNP-QDFIDCFLMKME-------KEKHNQPSEFTIESLENTAVDLFGAGTET 284
Query: 323 SSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSYLDKVTKEALRMYPS 382
+S+ L + L L ++P++ +K+++EI + + M Y D V E R
Sbjct: 285 TSTTLRYALLLLLKHPEVTAKVQEEIERVIGRNRSPCMQDRSHMPYTDAVVHEVQRYIDL 344
Query: 383 LPQ-LDR-----ISVKKYKLPNTDLTLDVGTKISIPTF-AIHYDPEYYPDPEKFDPERFS 435
LP L I + Y +P GT I + + ++ +D + +P+PE FDP F
Sbjct: 345 LPTSLPHAVTCDIKFRNYLIPK-------GTTI-LISLTSVLHDNKEFPNPEMFDPHHFL 396
Query: 436 PENIESRPHYTYLPFGDGPRNCIGMRFGTIQFKIGLAQLISNFEFS 481
E + ++PF G R C+G ++ + L ++ NF
Sbjct: 397 DEGGNFKKSKYFMPFSAGKRICVGEALAGMELFLFLTSILQNFNLK 442
>3e6i_A CYPIIE1, P450-J, cytochrome P450 2E1; CYP2E1, monooxygenase,
acetaminophen, oxidoreductase, heme, endoplasmic
reticulum, iron, membrane; HET: HEM; 2.20A {Homo
sapiens} PDB: 3e4e_A* 3gph_A* 3koh_A* 3lc4_A* 3t3z_A*
Length = 476
Score = 104 bits (263), Expect = 2e-24
Identities = 103/462 (22%), Positives = 174/462 (37%), Gaps = 63/462 (13%)
Query: 46 FPF-GNYGAGFLSRITFHQMHCEFYNKIKYDLKLPYGGLYHL---MTPKLMVTDPELYKY 101
P GN L ++ + F L +G ++ L +++ + K
Sbjct: 18 LPIIGN-----LFQLELKNIPKSFT-----RLAQRFGPVFTLYVGSQRMVVMHGYKAVKE 67
Query: 102 ILIKDFDHFVDRGIGESDAKRDPIEGH-LFGSKGEYWKRLRNKLSPT----FTSGKIKYM 156
L+ D F RG + + + G WK +R + S T + GK +
Sbjct: 68 ALLDYKDEFSGRGDLPA---FHAHRDRGIIFNNGPTWKDIR-RFSLTTLRNYGMGK-QGN 122
Query: 157 FPLIKKCSDQLITTIRKQIGESKQMSLEVKDYCARYTTDVIGSTAFGIEINSLENPDSEF 216
I++ + L+ +RK G+ + + CA +VI F + D +F
Sbjct: 123 ESRIQREAHFLLEALRKTQGQPFDPTFLI--GCA--PCNVIADILFR---KHFDYNDEKF 175
Query: 217 RQVSLLVMKP-SVLQMLKAVLSELIP-LIKYL---NLKIFDP--RISQFFSNLVKTNLSY 269
++ L + +L L P + YL + K+ + ++ S VK +
Sbjct: 176 LRLMYLFNENFHLLSTPWLQLYNNFPSFLHYLPGSHRKVIKNVAEVKEYVSERVKEHHQS 235
Query: 270 REKNNIKRD--DFLNIMMQLQIAQRGKTLSPDDVEMTDDVITAQSFVFFFGGYETSSSVL 327
+ N RD D L + M+ K + T D IT FF G ET+S+ L
Sbjct: 236 LDPNCP-RDLTDCLLVEME-------KEKHSAERLYTMDGITVTVADLFFAGTETTSTTL 287
Query: 328 TFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSYLDKVTKEALRMYPSLPQL- 386
+ L L + P+I+ KL +EI + +M Y+D V E R +P
Sbjct: 288 RYGLLILMKYPEIEEKLHEEIDRVIGPSRIPAIKDRQEMPYMDAVVHEIQRFITLVPSNL 347
Query: 387 ------DRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPEYYPDPEKFDPERFSPENIE 440
D + Y +P GT + ++ YD + +PDPEKF PE F EN +
Sbjct: 348 PHEATRD-TIFRGYLIPK-------GTVVVPTLDSVLYDNQEFPDPEKFKPEHFLNENGK 399
Query: 441 SRPHYTYLPFGDGPRNCIGMRFGTIQFKIGLAQLISNFEFSI 482
+ + PF G R C G ++ + L ++ +F
Sbjct: 400 FKYSDYFKPFSTGKRVCAGEGLARMELFLLLCAILQHFNLKP 441
>1po5_A Cytochrome P450 2B4; oxidoreductase, membrane protein, CYP 2B4, CYP
LM2, cytochro monooxygenase; HET: HEM; 1.60A
{Oryctolagus cuniculus} SCOP: a.104.1.1 PDB: 3mvr_A*
2bdm_A* 3g5n_A* 3g93_A* 3kw4_A* 3me6_A* 1suo_A* 3r1a_A*
3r1b_A* 2q6n_A* 3tk3_A* 3ibd_A* 3qoa_A* 3qu8_A*
Length = 476
Score = 101 bits (253), Expect = 4e-23
Identities = 90/461 (19%), Positives = 175/461 (37%), Gaps = 60/461 (13%)
Query: 46 FPF-GNYGAGFLSRITFHQMHCEFYNKIKYDLKLPYGGLYHL---MTPKLMVTDPELYKY 101
P GN L ++ + F L+ YG ++ + P +++ + +
Sbjct: 18 LPVLGN-----LLQMDRKGLLRSFLR-----LREKYGDVFTVYLGSRPVVVLCGTDAIRE 67
Query: 102 ILIKDFDHFVDRGIGESDAKRDPIEGH-LFGSKGEYWKRLRNKLSPT----FTSGKIKYM 156
L+ + F RG +G+ + + GE W+ LR + S F GK + +
Sbjct: 68 ALVDQAEAFSGRGKIAVV--DPIFQGYGVIFANGERWRALR-RFSLATMRDFGMGK-RSV 123
Query: 157 FPLIKKCSDQLITTIRKQIGESKQMSLEVKDYCARYTTDVIGSTAFGIEINSLENPDSEF 216
I++ + L+ +RK G +L + T+++I S FG + D F
Sbjct: 124 EERIQEEARCLVEELRKSKGALLDNTLLF--HSI--TSNIICSIVFG---KRFDYKDPVF 176
Query: 217 RQ-VSLLVMKPSVLQMLKAVLSELIP-LIKYL---NLKIFDP--RISQFFSNLVKTNLSY 269
+ + L S++ + + EL +K+ + +I+ I+ F V+ + +
Sbjct: 177 LRLLDLFFQSFSLISSFSSQVFELFSGFLKHFPGTHRQIYRNLQEINTFIGQSVEKHRAT 236
Query: 270 REKNNIKRD--DFLNIMMQLQIAQRGKTLSPDDVEMTDDVITAQSFVFFFGGYETSSSVL 327
+ +N RD D + M+ K S E + FF G ET+S+ L
Sbjct: 237 LDPSNP-RDFIDVYLLRME-------KDKSDPSSEFHHQNLILTVLSLFFAGTETTSTTL 288
Query: 328 TFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSYLDKVTKEALRMYPSLPQ-L 386
+ + + P + ++++EI + KM Y D V E R+ +P +
Sbjct: 289 RYGFLLMLKYPHVTERVQKEIEQVIGSHRPPALDDRAKMPYTDAVIHEIQRLGDLIPFGV 348
Query: 387 DR-----ISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPEYYPDPEKFDPERFSPENIES 441
+ Y +P T++ + +DP Y+ P F+P F N
Sbjct: 349 PHTVTKDTQFRGYVIPK-------NTEVFPVLSSALHDPRYFETPNTFNPGHFLDANGAL 401
Query: 442 RPHYTYLPFGDGPRNCIGMRFGTIQFKIGLAQLISNFEFSI 482
+ + ++PF G R C+G + + ++ NF +
Sbjct: 402 KRNEGFMPFSLGKRICLGEGIARTELFLFFTTILQNFSIAS 442
>2zwu_A Camphor 5-monooxygenase; P450CAM, camphor-hydroxylase, heme, iron,
metal-binding, oxidoreductase, substrate-soaking,
cytoplasm; HET: HEM CAM; 1.30A {Pseudomonas putida} PDB:
1gem_A* 1iwi_A* 2l8m_A* 2z97_A* 1gek_A* 2zax_A* 2zaw_A*
2zwt_A* 1rf9_A* 1lwl_A* 1iwk_A* 1iwj_A* 2zui_A* 2fe6_A*
1geb_A* 1yrc_A* 1noo_A* 1cp4_A* 1pha_A* 1phc_A* ...
Length = 415
Score = 79.7 bits (197), Expect = 3e-16
Identities = 55/395 (13%), Positives = 117/395 (29%), Gaps = 88/395 (22%)
Query: 92 MVTDPELYKYILIKDFDHFVDRGIGESDAKRDPIEGHLFGSKGEYWKRLRNKLSPTFTSG 151
+ T +L + +D+ HF + + ++ R +
Sbjct: 65 IATRGQLIREAY-EDYRHFSSECPFIPREAGEAYDFIPTSMDPPEQRQFRALANQVVGMP 123
Query: 152 KIKYMFPLIKKCSDQLITTIRKQIGESKQMSLEVKDYCARYTTDVIGSTAFGIEINSLEN 211
+ + I++ + LI ++R Q G+ + +DY + + G+
Sbjct: 124 VVDKLENRIQELACSLIESLRPQ-GQ---CNF-TEDYAEPFPIRIF-MLLAGL------- 170
Query: 212 PDS---EFRQVSLLVMKPSVLQMLKAVLSELIPLIKYLNLKIFDPRISQFFSNLVKTNLS 268
P+ + ++ + +P L + +++
Sbjct: 171 PEEDIPHLKYLTDQMTRPDGSMTFAEAKEALY----------------DYLIPIIEQ--- 211
Query: 269 YREKNNIKRDDFLNIMMQLQIAQRGKTLSPDDVEMTDDVITAQSFVFFFGGYETSSSVLT 328
R + D ++I+ Q+ + +T D + GG +T + L+
Sbjct: 212 -RRQK--PGTDAISIVANGQV---------NGRPITSDEAKRMCGLLLVGGLDTVVNFLS 259
Query: 329 FCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSYLDKVTKEALRMYPSLPQLDR 388
F + LA++P+ + +L + + +E LR SL R
Sbjct: 260 FSMEFLAKSPEHRQELIER------------------PERIPAACEELLR-RFSLVADGR 300
Query: 389 ISVKKYKLPNTDLTLD-----VGTKISIPTFAIHYDPEYYPDPEKFDPERFSPENIESRP 443
I D G +I +P D P D R +
Sbjct: 301 ILTS-------DYEFHGVQLKKGDQILLPQMLSGLDERENACPMHVDFSR------QKVS 347
Query: 444 HYTYLPFGDGPRNCIGMRFGTIQFKIGLAQLISNF 478
H FG G C+G + + L + ++
Sbjct: 348 H---TTFGHGSHLCLGQHLARREIIVTLKEWLTRI 379
>3oft_A Cytochrome P450, CYP101C1; oxidoreductase; HET: HEM; 1.90A
{Novosphingobium aromaticivorans} PDB: 3ofu_A*
Length = 396
Score = 71.1 bits (175), Expect = 1e-13
Identities = 52/377 (13%), Positives = 114/377 (30%), Gaps = 86/377 (22%)
Query: 92 MVTDPELYKYILIKDFDHFVDRGIGESDAKRDPIEGHLFGSKGEYWKRLRNKLSPTFTSG 151
+ ++ + + D + + + + ++ G K R + S
Sbjct: 50 IAARGDVVRELW-GDAERLSSQCLAVTPGLGKVMQFIPLQQDGAEHKAFRTPVMKGLASR 108
Query: 152 KIKYMFPLIKKCSDQLITTIRKQIGESKQMSLEVKDYCARYTTDVIGSTAFGIEINSLEN 211
+ + P ++ + +L+ ++R + G V D+ ++ T +
Sbjct: 109 FVVALEPKVQAVARKLMESLRPR-GS---CDF-VSDFAEILPLNIF-LTLIDV------- 155
Query: 212 PDS---EFRQVSLLVMKPSVLQMLKAVLSELIPLIKYLNLKIFDPRISQFFSNLVKTNLS 268
P RQ+ + + +P ++ + + ++
Sbjct: 156 PLEDRPRLRQLGVQLTRPDGSMTVEQLKQAAD----------------DYLWPFIEK--- 196
Query: 269 YREKNNIKRDDFLNIMMQLQIAQRGKTLSPDDVEMTDDVITAQSFVFFFGGYETSSSVLT 328
R DD + ++ + T D FGG +T ++++
Sbjct: 197 -RMAQ--PGDDLFSRILSEPV---------GGRPWTVDEARRMCRNLLFGGLDTVAAMIG 244
Query: 329 FCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSYLDKVTKEALRMYPSLPQLDR 388
LAR+P+ Q LR+ + E +R YP+ + R
Sbjct: 245 MVALHLARHPEDQRLLRER------------------PDLIPAAADELMRRYPT-VAVSR 285
Query: 389 ISVKKYKLPNTDLTLD-----VGTKISIPTFAIHYDPEYYPDPEKFDPERFSPENIESRP 443
+V D+ D G + +P+ + DP + PE+ +R
Sbjct: 286 NAVA-------DVDADGVTIRKGDLVYLPSVLHNLDPASFEAPEEVRFDRGLAPI----R 334
Query: 444 HYTYLPFGDGPRNCIGM 460
H G G C+G
Sbjct: 335 H---TTMGVGAHRCVGA 348
>2wiy_A XPLA-heme, cytochrome P450-like protein XPLA; CYT-P450, RDX,
bioremediation, electron transport; HET: HEM; 1.49A
{Rhodococcus} PDB: 2wiv_A*
Length = 394
Score = 70.3 bits (173), Expect = 3e-13
Identities = 49/329 (14%), Positives = 95/329 (28%), Gaps = 78/329 (23%)
Query: 139 RLRNKLSPTFTSGKIKYMFPLIKKCSDQLITTIRKQIGESKQMSLEVKDYCARYTTDVIG 198
LR + + FT + ++ L+ + + + +D T +
Sbjct: 89 VLRRQTNKWFTPKLVDGWVRTTRELVGDLLDGVE----AGQVIEA-RRDLAVVPTHVTMA 143
Query: 199 STAFGIEINSLENPDS---EFRQVSLLVMKPSVLQMLKAVLSELIPLIKYLNLKIFDPRI 255
+ P+ + M + + YL
Sbjct: 144 RV-LQL-------PEDDADAVMEAMFEAMLMQSAEPADGDVDRAAVAFGYL--------- 186
Query: 256 SQFFSNLVKTNLSYREKNNIKRDDFLNIMMQLQIAQRGKTLSPDDVEMTDDVITAQSFVF 315
S + +++ + N D + ++ E+T+ A VF
Sbjct: 187 SARVAEMLED----KRVN--PGDGLADSLLDAA----------RAGEITESEAIATILVF 230
Query: 316 FFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSYLDKVTKE 375
+ G+ ++ + AR P++ + R + S + E
Sbjct: 231 YAVGHMAIGYLIASGIELFARRPEVFTAFRND------------------ESARAAIINE 272
Query: 376 ALRMYPSLPQLDRISVKKYKLPNTDLTLD-----VGTKISIPTFAIHYDPEYYPDPEKFD 430
+RM P R D+ + G+ I A + DPE + DP+ FD
Sbjct: 273 MVRMDPPQLSFLRFPT-------EDVEIGGVLIEAGSPIRFMIGAANRDPEVFDDPDVFD 325
Query: 431 PERFSPENIESRPHYTYLPFGDGPRNCIG 459
R + + L FG GP +C G
Sbjct: 326 HTRPPAAS----RN---LSFGLGPHSCAG 347
>3ejb_B Biotin biosynthesis cytochrome P450-like enzyme; protein-protein
complex, cytochrome P450 fold, carrier protein, 4-helix
bundle, cytoplasm; HET: ZMP HTG HEM; 2.00A {Bacillus
subtilis} PDB: 3ejd_B* 3eje_B*
Length = 404
Score = 70.0 bits (172), Expect = 4e-13
Identities = 51/329 (15%), Positives = 119/329 (36%), Gaps = 80/329 (24%)
Query: 139 RLRNKLSPTFTSGKIKYMFPLIKKCSDQLITTIRKQIGESKQMSLEVKDYCARYTTDVIG 198
RLR S FT + P I + L+ ++ K+M + + D+ + VI
Sbjct: 90 RLRTLASGAFTPRTTESYQPYIIETVHHLLDQVQ----GKKKMEV-ISDFAFPLASFVI- 143
Query: 199 STAFGIEINSLENPDSE---FRQVSLLVMKPSVLQMLKAVLSELIPLIKYLNLKIFDPRI 255
+ G+ P+ + ++ + +++ + L+E +
Sbjct: 144 ANIIGV-------PEEDREQLKEWAASLIQTIDFTRSRKALTEGNIMAVQA--------- 187
Query: 256 SQFFSNLVKTNLSYREKNNIKRDDFLNIMMQLQIAQRGKTLSPDDVEMTDDVITAQSFVF 315
+F L+ +++ + D ++++++ + + ++T++ + +
Sbjct: 188 MAYFKELI------QKRKRHPQQDMISMLLKGR----------EKDKLTEEEAASTCILL 231
Query: 316 FFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSYLDKVTKE 375
G+ET+ ++++ + L ++P+ KLR+ + +E
Sbjct: 232 AIAGHETTVNLISNSVLCLLQHPEQLLKLREN------------------PDLIGTAVEE 273
Query: 376 ALRMYPSLPQLDRISVKKYKLPNTDLTLD-----VGTKISIPTFAIHYDPEYYPDPEKFD 430
LR R++ D+ + G ++ + A + DP + +P+ FD
Sbjct: 274 CLRYESPTQMTARVAS-------EDIDICGVTIRQGEQVYLLLGAANRDPSIFTNPDVFD 326
Query: 431 PERFSPENIESRPHYTYLPFGDGPRNCIG 459
R PH L FG G C+G
Sbjct: 327 ITR------SPNPH---LSFGHGHHVCLG 346
>4dxy_A Cytochrome P450, CYP101D2; cytochrome P450 mutant, HAEM-dependent,
mono-oxygenases, oxidoreductase; HET: HEM; 2.00A
{Novosphingobium aromaticivorans} PDB: 3nv6_A* 3nv5_A*
Length = 417
Score = 69.7 bits (171), Expect = 5e-13
Identities = 62/383 (16%), Positives = 114/383 (29%), Gaps = 94/383 (24%)
Query: 92 MVTDPELYKYILIKDFDHFVDRGIGESDAKRDPIEGHLFGSKGEYWKRLRNKLSPTFTSG 151
+ T+ + K + D F I + + R L
Sbjct: 65 IATNGDTVKEVY-SDPTRFSSEVIFLPKEAGEKAQMVPTKMDPPEHTPYRKALDKGLNLA 123
Query: 152 KIKYMFPLIKKCSDQLITTIRKQIGESKQMSLEVKDYCARYTTDVIGSTAFGIEINSLEN 211
KI+ + +++ + LI + + GE +Y + V +
Sbjct: 124 KIRKVEDKVREVASSLIDSFAAR-GE---CDF-AAEYAELFPVHVF-MALADL------- 170
Query: 212 PDS---EFRQVSLLVMKPS------VLQMLKAVLSELIPLIKYLNLKIFDPRISQFFSNL 262
P + + + +P + L+A + + +
Sbjct: 171 PLEDIPVLSEYARQMTRPEGNTPEEMATDLEAGNNGFY----------------AYVDPI 214
Query: 263 VKTNLSYREKNNIKRDDFLNIMMQLQIAQRGKTLSPDDVEMTDDVITAQSFVFFFGGYET 322
++ R DD + +M+ +I + + D + GG +T
Sbjct: 215 IRA----RVGG--DGDDLITLMVNSEI---------NGERIAHDKAQGLISLLLLGGLDT 259
Query: 323 SSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSYLDKVTKEALRMYPS 382
+ L+F + LAR+P++ ++LR + L + +E R +P
Sbjct: 260 VVNFLSFFMIHLARHPELVAELRSD------------------PLKLMRGAEEMFRRFP- 300
Query: 383 LPQLDRISVKKYKLPNTDLTLD-----VGTKISIPTFAIHYDPEYYPDPEKFDPERFSPE 437
+ R+ K D G I +PT D P+P K D R
Sbjct: 301 VVSEARMVAK-------DQEYKGVFLKRGDMILLPTALHGLDDAANPEPWKLDFSR---- 349
Query: 438 NIESRPHYTYLPFGDGPRNCIGM 460
S H FG GP C GM
Sbjct: 350 --RSISH---STFGGGPHRCAGM 367
>3lxh_A Cytochrome P450; heme, iron, metal-binding, monooxygena
oxidoreductase; HET: HEM; 2.20A {Novosphingobium
aromaticivorans} PDB: 3lxi_A*
Length = 421
Score = 69.6 bits (171), Expect = 5e-13
Identities = 57/383 (14%), Positives = 111/383 (28%), Gaps = 94/383 (24%)
Query: 92 MVTDPELYKYILIKDFDHFVDRGIGESDAKRDPIEGHLFGSKGEYWKRLRNKLSPTFTSG 151
+ T L I + + F R I + + R +
Sbjct: 66 IATRGTLIDEIY-RSPERFSSRVIWVPREAGEAYDMVPTKLDPPEHTPYRKAIDKGLNLA 124
Query: 152 KIKYMFPLIKKCSDQLITTIRKQIGESKQMSLEVKDYCARYTTDVIGSTAFGIEINSLEN 211
+I+ + I+ + ++I + G ++ + V G+
Sbjct: 125 EIRKLEDQIRTIAVEIIEGFADR-GH---CEF-GSEFSTVFPVRVF-LALAGL------- 171
Query: 212 PDS---EFRQVSLLVMKPS------VLQMLKAVLSELIPLIKYLNLKIFDPRISQFFSNL 262
P + ++ + +PS + L+A ++ + +
Sbjct: 172 PVEDATKLGLLANEMTRPSGNTPEEQGRSLEAANKGFF----------------EYVAPI 215
Query: 263 VKTNLSYREKNNIKRDDFLNIMMQLQIAQRGKTLSPDDVEMTDDVITAQSFVFFFGGYET 322
+ R D + ++ ++I D M DD + GG +T
Sbjct: 216 IAA----RRGG--SGTDLITRILNVEI---------DGKPMPDDRALGLVSLLLLGGLDT 260
Query: 323 SSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSYLDKVTKEALRMYPS 382
+ L F + L+R+P+ +++R+E L + +E R +
Sbjct: 261 VVNFLGFMMIYLSRHPETVAEMRRE------------------PLKLQRGVEELFR-RFA 301
Query: 383 LPQLDRISVKKYKLPNTDLTLD-----VGTKISIPTFAIHYDPEYYPDPEKFDPERFSPE 437
+ R V D+ G I +PT D ++ DP D R
Sbjct: 302 VVSDARYVVS-------DMEFHGTMLKEGDLILLPTALHGLDDRHHDDPMTVDLSR---- 350
Query: 438 NIESRPHYTYLPFGDGPRNCIGM 460
H F GP C GM
Sbjct: 351 --RDVTH---STFAQGPHRCAGM 368
>3rwl_A Cytochrome P450 alkane hydroxylase 1 CYP153A7; P450 monooxygenase,
oxidoreductase; HET: HEM; 2.00A {Sphingopyxis
macrogoltabida}
Length = 426
Score = 69.6 bits (171), Expect = 5e-13
Identities = 61/352 (17%), Positives = 118/352 (33%), Gaps = 85/352 (24%)
Query: 139 RLRNKLSPTFTSGKIKYMFPLIKKCSDQLITTIRKQIGESKQMSLEVKDYCARYTTDVIG 198
R +SP + + I++ + + + ++ V TT ++
Sbjct: 121 EQRKAVSPIVAPANLAALEGTIRERVSKTLDGLP----VGEEFDW-VDRVSIEITTQMLA 175
Query: 199 STAFGIEINSLENPDSEFRQVSLLVMK------PSVLQMLKAVLSELIPLIKYLNLKIFD 252
T F P E R+++ V++ +EL+ Y
Sbjct: 176 -TLFDF-------PFEERRKLTRWSDVTTAAPGGGVVESWDQRKTELLECAAY------- 220
Query: 253 PRISQFFSNLVKTNLSYREKNNIKRDDFLNIMMQLQIAQRGKTLSPDDVEMTDDVITAQS 312
F L R + +D ++++ SP MT +
Sbjct: 221 ------FQVLWNE----RVNKD-PGNDLISMLAH----------SPATRNMTPEEYLGNV 259
Query: 313 FVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSYLDKV 372
+ GG +T+ + +T + L +NPD +KL+ + ++ +
Sbjct: 260 LLLIVGGNDTTRNSMTGGVLALHKNPDQFAKLKAN------------------PALVETM 301
Query: 373 TKEALRMYPSLPQLDRISVKKYKLPNTDLTL-DV----GTKISIPTFAIHYDPEYYPDPE 427
E +R L + R ++ D L G K+ + ++ + D E PE
Sbjct: 302 VPEIIRWQTPLAHMRRTAIA-------DSELGGKTIRKGDKVVMWYYSGNRDDEVIDRPE 354
Query: 428 KFDPERFSPENIESRPHYTYLPFGDGPRNCIGMRFGTIQFKIGLAQLISNFE 479
+F +R P R H L FG G C+G R +Q +I ++++ F
Sbjct: 355 EFIIDRPRP-----RQH---LSFGFGIHRCVGNRLAEMQLRILWEEILTRFS 398
>3nc3_A Cytochrome P450 CYPX; cytochrome P450 oxidase, HAEM protein,
oxidoreductase; HET: HEM; 2.66A {Bacillus subtilis} PDB:
3nc5_A* 3nc6_A* 3nc7_A*
Length = 441
Score = 69.7 bits (171), Expect = 6e-13
Identities = 57/360 (15%), Positives = 107/360 (29%), Gaps = 92/360 (25%)
Query: 139 RLRNKLSPTFTSGKIKYMFPLIKKCSDQLITTIRKQIGESKQMSLEVKDYCARYTTDVIG 198
R + +F + ++ PLIK+ ++ L+ E + L V D+ + V
Sbjct: 123 AKRRIVVRSFIGDALDHLSPLIKQNAENLLAPYL----ERGKSDL-VNDFGKTFAVCVT- 176
Query: 199 STAFGIEINSLENPDSE---FRQVSLLVMK--------PSVLQMLKAVLSELIPLIKYLN 247
G+ + + V P +L
Sbjct: 177 MDMLGL-------DKRDHEKISEWHSGVADFITSISQSPEARAHSLWCSEQL-------- 221
Query: 248 LKIFDPRISQFFSNLVKTNLSYREKNNIKRDDFLNIMMQLQIAQRGKTLSPDDVEMTDDV 307
SQ+ ++K R N D ++I+ + + + ++D
Sbjct: 222 --------SQYLMPVIKE----RRVN--PGSDLISILCTSEY---------EGMALSDKD 258
Query: 308 ITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMS 367
I A E + L +Y L NP+ + + + S
Sbjct: 259 ILALILNVLLAATEPADKTLALMIYHLLNNPEQMNDVLAD------------------RS 300
Query: 368 YLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLTLD-----VGTKISIPTFAIHYDPEY 422
+ + E LR P + + R + D + T + A + DPE
Sbjct: 301 LVPRAIAETLRYKPPVQLIPRQLSQ-------DTVVGGMEIKKDTIVFCMIGAANRDPEA 353
Query: 423 YPDPEKFDPER----FSPENIESRPHYTYLPFGDGPRNCIGMRFGTIQFKIGLAQLISNF 478
+ P+ F+ R + H L FG G NC+G F + +I ++
Sbjct: 354 FEQPDVFNIHREDLGIKSAFSGAARH---LAFGSGIHNCVGTAFAKNEIEIVANIVLDKM 410
>3r9b_A Cytochrome P450 164A2; monooxygenase, oxidoreductase; HET: HEM D12;
1.89A {Mycobacterium smegmatis} PDB: 3r9c_A*
Length = 418
Score = 67.7 bits (166), Expect = 2e-12
Identities = 59/329 (17%), Positives = 110/329 (33%), Gaps = 75/329 (22%)
Query: 139 RLRNKLSPTFTSGKIKYMFPLIKKCSDQLITTIRKQIGESKQMSLEVKDYCARYTTDVIG 198
RLR +S F IK + P I DQL+ + + + +L + + VI
Sbjct: 107 RLRGLVSKAFAPRVIKRLEPEITALVDQLLDAV-----DGPEFNL-IDNLAYPLPVAVI- 159
Query: 199 STAFGIEINSLENPDS---EFRQVSLLVMKPSVLQMLKAVLSELIPLIKYLNLKIFDPRI 255
G+ P +F + S L+ + + + +
Sbjct: 160 CRLLGV-------PIEDEPKFSRASALLAAALDPFLALTGETSDLFDEQMKAGMWL---- 208
Query: 256 SQFFSNLVKTNLSYREKNNIKRDDFLNIMMQLQIAQRGKTLSPDDVEMTDDVITAQSFVF 315
+ L+ E+ +D ++ ++ ++ ++T+D I A +
Sbjct: 209 RDYLRALI------DERRRTPGEDLMSGLVAVEE---------SGDQLTEDEIIATCNLL 253
Query: 316 FFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSYLDKVTKE 375
G+ET+ +++ + R P + L + S V +E
Sbjct: 254 LIAGHETTVNLIANAALAMLRTPGQWAALAAD------------------GSRASAVIEE 295
Query: 376 ALRMYPSLPQLDRISVKKYKLPNTDLTLD-----VGTKISIPTFAIHYDPEYYPDPEKFD 430
+R P + + R + DLT+ G + + A H DP P++FD
Sbjct: 296 TMRYDPPVQLVSRYAG-------DDLTIGTHTVPKGDTMLLLLAAAHRDPTIVGAPDRFD 348
Query: 431 PERFSPENIESRPHYTYLPFGDGPRNCIG 459
P+R H L FG G C+G
Sbjct: 349 PDR------AQIRH---LGFGKGAHFCLG 368
>4fb2_A P450CIN; heme, monooxygenase, cindoxin, oxidoreductase; HET: HEM
EDO; 1.37A {Citrobacter braakii} PDB: 1t2b_A* 3bdz_A*
3be0_A*
Length = 398
Score = 66.9 bits (164), Expect = 4e-12
Identities = 49/392 (12%), Positives = 117/392 (29%), Gaps = 88/392 (22%)
Query: 105 KDFDHFVDRGIGESDAKRDPIEGHLFGSKGEYWKRLRNKLSPTFTSGKIKYMFPLIKKCS 164
++ F ++G+ + E + G K+ R ++ F+ +++ +
Sbjct: 60 QNTKAFSNKGVTFPRYETGEFELMMAGQDDPVHKKYRQLVAKPFSPEATDLFTEQLRQST 119
Query: 165 DQLITTIRKQIGESKQMSLEVKDYCARYTTDVIGSTAFGIEINSLENPDSE---FRQVSL 221
+ LI E + + G+ P + +R+
Sbjct: 120 NDLIDARI----ELGEGDA-ATWLANEIPARLTAI-LLGL-------PPEDGDTYRRWVW 166
Query: 222 LVMKPSVLQMLKAVLSELIPLIKYLNLKIFDPRISQFFSNLVKTNLSYREKNNIKRDDFL 281
+ + + +EL+ L+ R N +D +
Sbjct: 167 AITHVENPEEGAEIFAELV----------------AHARTLIA----ERRTN--PGNDIM 204
Query: 282 NIMMQLQIAQRGKTLSPDDVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQ 341
+ ++ +I D +++D + + GG + ++ L+ + LA + +++
Sbjct: 205 SRVIMSKI---------DGESLSEDDLIGFFTILLLGGIDNTARFLSSVFWRLAWDIELR 255
Query: 342 SKLRQEIMATKKKEGELTYEICHKMSYLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDL 401
+L + E LR Y + R+ + ++
Sbjct: 256 RRLIAH------------------PELIPNAVDELLRFYGPA-MVGRLVTQ-------EV 289
Query: 402 TLD-----VGTKISIPTFAIHYDPEYYPDPEKFDPERFSPENIESRPHYTYLPFGDGPRN 456
T+ G + D + P+ ER H L G G
Sbjct: 290 TVGDITMKPGQTAMLWFPIASRDRSAFDSPDNIVIER------TPNRH---LSLGHGIHR 340
Query: 457 CIGMRFGTIQFKIGLAQLISNF-EFSIDSANA 487
C+G ++ ++ + + + EFS+D
Sbjct: 341 CLGAHLIRVEARVAITEFLKRIPEFSLDPNKE 372
>1z8o_A 6-deoxyerythronolide B hydroxylase; heme, CYP, erythromycin,
oxidoreductase; HET: HEM DEB; 1.70A {Saccharopolyspora
erythraea} SCOP: a.104.1.1 PDB: 1z8p_A* 1z8q_A* 1jio_A*
1jip_A* 1eup_A* 1egy_A* 1jin_A* 1oxa_A*
Length = 404
Score = 66.9 bits (164), Expect = 4e-12
Identities = 66/335 (19%), Positives = 123/335 (36%), Gaps = 95/335 (28%)
Query: 139 RLRNKLSPTFTSGKIKYMFPLIKKCSDQLITTIRKQIGESKQMSLEVKDYCARYTTDVIG 198
RLR +S FT +++ M P +++ + +L+ + +S + + V + VI
Sbjct: 100 RLRKLVSQEFTVRRVEAMRPRVEQITAELLDEVG----DSGVVDI-VDRFAHPLPIKVI- 153
Query: 199 STAFGIEINSLENPDSE---FRQVS--LLVMKPSVLQMLKAVLSELIPLIKYLNLKIFDP 253
G+ + F + S +LVM P + E++
Sbjct: 154 CELLGV-------DEKYRGEFGRWSSEILVMDPERAEQRGQAAREVV------------- 193
Query: 254 RISQFFSNLVKTNLSYREKNNIKR----DDFLNIMMQLQIAQRGKTLSPDDVEMTDDVIT 309
F +LV+ +R DD L+ +++ Q DD ++ D +T
Sbjct: 194 ---NFILDLVER----------RRTEPGDDLLSALIR---VQDD-----DDGRLSADELT 232
Query: 310 AQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSYL 369
+ + V G+E S S++ Y L +PD + +R++ S L
Sbjct: 233 SIALVLLLAGFEASVSLIGIGTYLLLTHPDQLALVRRD------------------PSAL 274
Query: 370 DKVTKEALRMYPSLPQLDRISVKKYKLPNTDLTLD-----VGTKISIPTFAIHYDPEYYP 424
+E LR R + ++ + + + + A + DP+ +P
Sbjct: 275 PNAVEEILRYIAPPETTTRFAA-------EEVEIGGVAIPQYSTVLVANGAANRDPKQFP 327
Query: 425 DPEKFDPERFSPENIESRPHYTYLPFGDGPRNCIG 459
DP +FD R ++R H L FG G C+G
Sbjct: 328 DPHRFDVTR------DTRGH---LSFGQGIHFCMG 353
>3buj_A CALO2; heme, iron, metal-binding, monooxygenase, oxidoreducta
binding protein; HET: HEM; 2.47A {Micromonospora
echinospora}
Length = 397
Score = 66.1 bits (162), Expect = 8e-12
Identities = 59/336 (17%), Positives = 105/336 (31%), Gaps = 94/336 (27%)
Query: 139 RLRNKLSPTFTSGKIKYMFPLIKKCSDQLITTIRKQIGESKQMSLEVKDYCARYTTDVIG 198
RLR + P F+ ++ + P+I D L+ M + V + +
Sbjct: 89 RLRGVVGPAFSPSALRRLEPVIAGTVDDLLRPAL----ARGAMDV-VDELAYPLALRAV- 142
Query: 199 STAFGIEINSLENPDSE---FRQVSLLVMK-------PSVLQMLKAVLSELIPLIKYLNL 248
G+ P ++ + S V + ++ A ++E
Sbjct: 143 LGLLGL-------PAADWGAVGRWSRDVGRTLDRGASAEDMRRGHAAIAEF--------- 186
Query: 249 KIFDPRISQFFSNLVKTNLSYREKNNIKRDDFLNIMMQLQIAQRGKTLSPDDVEMTDDVI 308
+ + + + +D L +M + D M+ + I
Sbjct: 187 -------ADYVERAL------ARRRREGGEDLLALM----LDAH------DRGLMSRNEI 223
Query: 309 TAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSY 368
+ F F G+ET +S + + L +PD LR+
Sbjct: 224 VSTVVTFIFTGHETVASQVGNAVLSLLAHPDQLDLLRRR------------------PDL 265
Query: 369 LDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLTLD-----VGTKISIPTFAIHYDPEYY 423
L + +E LR PS+ R D+ L + + A + DP Y
Sbjct: 266 LAQAVEECLRYDPSVQSNTRQLD-------VDVELRGRRLRRDDVVVVLAGAANRDPRRY 318
Query: 424 PDPEKFDPERFSPENIESRPHYTYLPFGDGPRNCIG 459
P+ FD ER + P + FG G R C+G
Sbjct: 319 DRPDDFDIER------DPVPS---MSFGAGMRYCLG 345
>3abb_A CYP105D6, cytochrome P450 hydroxylase; oxidoreductase, heme,
monooxygenase, macrolide, filipi metal-binding; HET:
HEM; 2.30A {Streptomyces avermitilis}
Length = 408
Score = 65.7 bits (161), Expect = 8e-12
Identities = 60/369 (16%), Positives = 117/369 (31%), Gaps = 93/369 (25%)
Query: 103 LIKDFDHFVDRGIGESDAKRDPIEGHLFGSKGEYWKRLRNKLSPTFTSGKIKYMFPLIKK 162
L D+ H + R + L G R R L P+F ++ + P ++
Sbjct: 68 LSSDWGHPDFPVVVRRTEDRGGLAFPLIGVDDPVHARQRRMLIPSFGVKRMNAIRPRLQS 127
Query: 163 CSDQLITTIRKQIGESKQMSLEVKDYCARYTTDVIGSTAFGIEINSLENPDS---EFRQV 219
D+L+ + + G L V + + I G+ P F +
Sbjct: 128 LVDRLLDDMLAK-GPG--ADL-VSAFALPVPSVAI-CELLGV-------PYGDHDFFEEC 175
Query: 220 SLLVMKPSVLQMLKAVLSELIPLIKYLNLKIFDPRISQFFSNLVKTNLSYREKNNIKR-- 277
S + + A EL + LV K+
Sbjct: 176 SRNFVGAATSAEADAAFGELY----------------TYLHGLVGR----------KQAE 209
Query: 278 --DDFLNIMMQLQIAQRGKTLSPDDVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYELA 335
D L+ + IA++ ++ ++ D + + V G+ET+ + + L
Sbjct: 210 PEDGLLDEL----IARQL-----EEGDLDHDEVVMIALVLLVAGHETTVNAIALGALTLI 260
Query: 336 RNPDIQSKLRQEIMATKKKEGELTYEICHKMSYLDKVTKEALRMYPSLPQLDRISVKKYK 395
++P+ L ++ + V +E LR + R++
Sbjct: 261 QHPEQIDVLLRD------------------PGAVSGVVEELLRFTSVSDHIVRMAK---- 298
Query: 396 LPNTDLTLD-----VGTKISIPTFAIHYDPEYYPDPEKFDPERFSPENIESRPHYTYLPF 450
D+ + G + + ++ D + Y +P+ FD R +R H + F
Sbjct: 299 ---EDIEVGGATIKAGDAVLVSITLMNRDAKAYENPDIFDARR------NARHH---VGF 346
Query: 451 GDGPRNCIG 459
G G C+G
Sbjct: 347 GHGIHQCLG 355
>1odo_A Putative cytochrome P450 154A1; P450 monooxygenase, oxidoreductase;
HET: HEM PIM; 1.85A {Streptomyces coelicolor} SCOP:
a.104.1.1
Length = 408
Score = 65.8 bits (161), Expect = 9e-12
Identities = 61/336 (18%), Positives = 115/336 (34%), Gaps = 91/336 (27%)
Query: 139 RLRNKLSPTFTSGKIKYMFPLIKKCSDQLITTIRKQIGESKQMSLEVKDYCARYTTDVIG 198
+LR ++P F++ ++ M P ++ L+ + ++ + + L ++ VI
Sbjct: 97 KLRRLVAPAFSARRVDAMRPAVEAMVTGLVDRLA-ELPAGEPVDL-RQELAYPLPIAVI- 153
Query: 199 STAFGIEINSLENPDS---EFRQVSLLVMKPSV-LQMLKAVLSELIPLIKYLNLKIFDPR 254
G+ P FR + V ++ +A + L
Sbjct: 154 GHLMGV-------PQDRRDGFRALVDGVFDTTLDQAEAQANTARLY-------------- 192
Query: 255 ISQFFSNLVKTNLSYREKNNIKR----DDFLNIMMQLQIAQRGKTLSPDDVEMTDDVITA 310
+ L+ KR DD +++ IA R D ++ + +
Sbjct: 193 --EVLDQLIAA----------KRATPGDDMTSLL----IAARDDEGDGD--RLSPEELRD 234
Query: 311 QSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSYLD 370
+ GYET+ +V+ ++ L PD + +R+
Sbjct: 235 TLLLMISAGYETTVNVIDQAVHTLLTRPDQLALVRKG------------------EVTWA 276
Query: 371 KVTKEALRMYPSLPQL-DRISVKKYKLPNTDLTLDVGTKIS------IPTFAIHYDPEYY 423
V +E LR P++ L R +V TD+ L G I+ A + P+++
Sbjct: 277 DVVEETLRHEPAVKHLPLRYAV-------TDIALPDGRTIARGEPILASYAAANRHPDWH 329
Query: 424 PDPEKFDPERFSPENIESRPHYTYLPFGDGPRNCIG 459
D + FD R + H L FG G C+G
Sbjct: 330 EDADTFDATR------TVKEH---LAFGHGVHFCLG 356
>3a4g_A Vitamin D hydroxylase; cytochrome P450, hemoprotein, monoox
oxidoreductase; HET: HEM; 1.75A {Pseudonocardia
autotrophica} PDB: 3a4h_A* 3a51_A* 3a4z_A* 3a50_A*
Length = 411
Score = 65.7 bits (161), Expect = 9e-12
Identities = 56/334 (16%), Positives = 117/334 (35%), Gaps = 94/334 (28%)
Query: 139 RLRNKLSPTFTSGKIKYMFPLIKKCSDQLITTIRKQIGESKQMSLEVKDYCARYTTDVIG 198
RLR + +FT ++ + P I + +D L+ + + L +++Y + VI
Sbjct: 97 RLRKLVGRSFTVRRMNELEPRITEIADGLLAGLP----TDGPVDL-MREYAFQIPVQVI- 150
Query: 199 STAFGIEINSLENPDSE---FRQVSLLVMKPSVLQMLKAVLSELIPLIKYLNLKIFDPRI 255
G+ P + F S +++ S A + +L
Sbjct: 151 CELLGV-------PAEDRDDFSAWSSVLVDDSPADDKNAAMGKLH--------------- 188
Query: 256 SQFFSNLVKTNLSYREKNNIKR----DDFLNIMMQLQIAQRGKTLSPDDVEMTDDVITAQ 311
+ S+L++ KR D L+ + +A D ++ + + A
Sbjct: 189 -GYLSDLLER----------KRTEPDDALLSSL----LAVSD----EDGDRLSQEELVAM 229
Query: 312 SFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSYLDK 371
+ + G+ET+ +++ + L +PD + L ++ S +
Sbjct: 230 AMLLLIAGHETTVNLIGNGVLALLTHPDQRKLLAED------------------PSLISS 271
Query: 372 VTKEALRMYPSLPQL-DRISVKKYKLPNTDLTLD-----VGTKISIPTFAIHYDPEYYPD 425
+E LR + Q R + D+T G + + A + D ++ P+
Sbjct: 272 AVEEFLRFDSPVSQAPIRFTA-------EDVTYSGVTIPAGEMVMLGLAAANRDADWMPE 324
Query: 426 PEKFDPERFSPENIESRPHYTYLPFGDGPRNCIG 459
P++ D R ++ + FG G C+G
Sbjct: 325 PDRLDITR------DASGG---VFFGHGIHFCLG 349
>1q5d_A P450 epoxidase; cytochrome P450, epothilone, oxydoreductase,
heme-enzyme, oxidoreductase; HET: HEM EPB; 1.93A
{Sorangium cellulosum} SCOP: a.104.1.1 PDB: 1q5e_A*
1pkf_A*
Length = 419
Score = 65.7 bits (161), Expect = 1e-11
Identities = 54/330 (16%), Positives = 105/330 (31%), Gaps = 76/330 (23%)
Query: 139 RLRNKLSPTFTSGKIKYMFPLIKKCSDQLITTIRKQIGESKQMSLEVKDYCARYTTDVIG 198
R+R ++P+FTS I + I++ DQL+ ++ + V+DY I
Sbjct: 105 RVRKLVNPSFTSRAIDLLRAEIQRTVDQLLDARS----GQEEFDV-VRDYAEGIPMRAI- 158
Query: 199 STAFGIEINSLENPDS---EFRQVSLLVMKPSVLQMLKAVLSELIPLIKYLNLKIFDPRI 255
S + P +FR+ + + ++ V E L+ +
Sbjct: 159 SALLKV-------PAECDEKFRRFGSATARALGVGLVPRVDEETKTLVASVT------EG 205
Query: 256 SQFFSNLVKTNLSYREKNNIKRDDFLNIMMQLQIAQRGKTLSPDDVEMTDDVITAQSFVF 315
++ + N +D L +++Q + D ++ + A
Sbjct: 206 LALLHGVLD-----ERRRNPLENDVLTMLLQAEA---------DGSRLSTKELVALVGAI 251
Query: 316 FFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSYLDKVTKE 375
G +T+ ++ F + L R+P+ ++ E + E
Sbjct: 252 IAAGTDTTIYLIAFAVLNLLRSPEALELVKAE------------------PGLMRNALDE 293
Query: 376 ALRMYPSLP-QLDRISVKKYKLPNTDLTLD-----VGTKISIPTFAIHYDPEYYPDPEKF 429
LR L R + DL G + + + D + P+ F
Sbjct: 294 VLRFDNILRIGTVRFAR-------QDLEYCGASIKKGEMVFLLIPSALRDGTVFSRPDVF 346
Query: 430 DPERFSPENIESRPHYTYLPFGDGPRNCIG 459
D R ++ L +G GP C G
Sbjct: 347 DVRR------DTSAS---LAYGRGPHVCPG 367
>3tkt_A Cytochrome P450; aromatic hydrocarbon binding of P450 E
oxidoreductase; HET: HEM; 2.20A {Novosphingobium
aromaticivorans}
Length = 450
Score = 65.4 bits (160), Expect = 1e-11
Identities = 64/352 (18%), Positives = 122/352 (34%), Gaps = 75/352 (21%)
Query: 139 RLRNKLSPTFTSGKIKYMFPLIKKCSDQLITTIRKQIGESKQMSLEVKDYCARYTTDVIG 198
+LR F + + I+K +++ I + GE + A Y V+
Sbjct: 134 KLRRLTQDWFMPKNLARLDGEIRKIANEAIDRMLGA-GEEGDF---MALVAAPYPLHVV- 188
Query: 199 STAFGIEINSLENPDSE---FRQVSLLVMKPSVLQMLKAVLSELIPLIKYLNLKIFDPRI 255
G+ P + ++ + M K+ L +L P +
Sbjct: 189 MQILGV-------PPEDEPKMLFLTQQMFGGQDEDMNKSGLKDLPPEQISQIVAGAVAEF 241
Query: 256 SQFFSNLVKTNLSYREKNNIKRDDFLNIMMQLQIAQRGKTLSPDDVEMTDDVITAQSFVF 315
++F+ L E+ DD ++ + D M+D +
Sbjct: 242 ERYFAGLA------AERRRNPTDDVATVIANAVV---------DGEPMSDRDTAGYYIIT 286
Query: 316 FFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSYLDKVTKE 375
G++T+S+ LAR+PD+ ++++ + + L + +E
Sbjct: 287 ASAGHDTTSASSAGAALALARDPDLFARVKAD------------------RNLLPGIVEE 328
Query: 376 ALRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKI--------SIPTFAIHYDPEYYPDPE 427
A+R + R + TD L G KI + A ++DP +P+P
Sbjct: 329 AIRWTTPVQHFMRTAA-------TDTELC-GQKIAAGDWLMLNYV--AANHDPAQFPEPR 378
Query: 428 KFDPERFSPENIESRPHYTYLPFGDGPRNCIGMRFGTIQFKIGLAQLISNFE 479
KFDP R + H L FG G C+G+ ++ ++ L L+ +
Sbjct: 379 KFDPTR------PANRH---LAFGAGSHQCLGLHLARLEMRVLLDVLLDRVD 421
>2wm5_A CYP124, putative cytochrome P450 124; metal-binding,
oxidoreductase, omega-hydroxylation, iron, heme, fatty
acid, monooxygenase; HET: HEM; 1.50A {Mycobacterium
tuberculosis} PDB: 2wm4_A*
Length = 435
Score = 65.0 bits (159), Expect = 2e-11
Identities = 49/352 (13%), Positives = 115/352 (32%), Gaps = 81/352 (23%)
Query: 139 RLRNKLSPTFTSGKIKYMFPLIKKCSDQLITTIRKQIGESKQMSLEVKDYCARYTTDVIG 198
RLR+ +S FT + + ++ + +L++++ +Q L V + +I
Sbjct: 127 RLRSIVSRAFTPKVVARIEAAVRDRAHRLVSSMIAN-NPDRQADL-VSELAGPLPLQII- 183
Query: 199 STAFGIEINSLENPDSEFRQV---SLLVMK---PSVLQMLKAVLSELIPLIKYLNLKIFD 252
GI P ++ +++ + +++ P + + + Y
Sbjct: 184 CDMMGI-------PKADHQRIFHWTNVILGFGDPDLATDFDEFMQVSADIGAY------- 229
Query: 253 PRISQFFSNLVKTNLSYREKNNIKRDDFLNIMMQLQIAQRGKTLSPDDVEMTDDVITAQS 312
+ L ++ DD + +++ ++ D ++ I +
Sbjct: 230 ------ATALA------EDRRVNHHDDLTSSLVEAEV---------DGERLSSREIASFF 268
Query: 313 FVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSYLDKV 372
+ G ET+ + +T + L+R P+ + + +
Sbjct: 269 ILLVVAGNETTRNAITHGVLALSRYPEQRDRWWSD-----------------FDGLAPTA 311
Query: 373 TKEALRMYPSLPQLDRISVKKYKLPNTDLTLD-----VGTKISIPTFAIHYDPEYYPDPE 427
+E +R + + R + D+ L G K+S+ + + D + DP
Sbjct: 312 VEEIVRWASPVVYMRRTLTQ-------DIELRGTKMAAGDKVSLWYCSANRDESKFADPW 364
Query: 428 KFDPERFSPENIESRPHYTYLPFGDGPRNCIGMRFGTIQFKIGLAQLISNFE 479
FD R PH + G G C+G + ++ +L
Sbjct: 365 TFDLAR------NPNPHLGF--GGGGAHFCLGANLARREIRVAFDELRRQMP 408
>2uuq_A CYP130, cytochrome P450 130; iron, heme, monooxygenase,
metal-binding, oxidoreductase, hypothetical protein;
HET: HEM; 1.46A {Mycobacterium tuberculosis} PDB:
2uvn_A* 2whf_A* 2wh8_A* 2wgy_A*
Length = 414
Score = 64.6 bits (158), Expect = 2e-11
Identities = 55/361 (15%), Positives = 123/361 (34%), Gaps = 82/361 (22%)
Query: 139 RLRNKLSPTFTSGKIKYMFPLIKKCSDQLITTIRKQIGESKQMSLEVKDYCARYTTDVIG 198
R +S FT +++ + P ++K + + +R + + V + + V+
Sbjct: 106 EFRKLVSRGFTPRQVETVEPTVRKFVVERLEKLR----ANGGGDI-VTELFKPLPSMVVA 160
Query: 199 STAFGIEINSLENPDSE---FRQVSLLVMKPSVLQMLKAVLSELIPLIKYLNLKIFDPRI 255
G+ P+ + F + ++ + + + + +
Sbjct: 161 H-YLGV-------PEEDWTQFDGWTQAIVAANAVDGATTGALDAVG------------SM 200
Query: 256 SQFFSNLVKTNLSYREKNNIKRDDFLNIMMQLQIAQRGKTLSPDDVEMTDDVITAQSFVF 315
+F+ L++ R DD ++ ++ + G T I A +F
Sbjct: 201 MAYFTGLIE----RRRTE--PADDAISHLVAAGVGADGDTAGTLS-------ILAFTFTM 247
Query: 316 FFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSYLDKVTKE 375
GG +T + +L + L R PD + L + + +E
Sbjct: 248 VTGGNDTVTGMLGGSMPLLHRRPDQRRLLLDD------------------PEGIPDAVEE 289
Query: 376 ALRMYPSLPQLDRISVKKYKLPNTDLTLD-----VGTKISIPTFAIHYDPE-YYPDPEKF 429
LR+ + L R + + D+T+ G ++ + + + D Y PD +
Sbjct: 290 LLRLTSPVQGLARTTTR-------DVTIGDTTIPAGRRVLLLYGSANRDERQYGPDAAEL 342
Query: 430 DPERFSPENIESRPHYTYLPFGDGPRNCIGMRFGTIQFKIGLAQLISNF-EFSIDSANAT 488
D R R L F G +C+G +Q ++ L +L++ +F + +
Sbjct: 343 DVTR------CPRNI---LTFSHGAHHCLGAAAARMQCRVALTELLARCPDFEVAESRIV 393
Query: 489 F 489
+
Sbjct: 394 W 394
>1cpt_A Cytochrome P450-TERP; oxidoreductase(oxygenase); HET: HEM; 2.30A
{Pseudomonas SP} SCOP: a.104.1.1
Length = 428
Score = 64.6 bits (158), Expect = 3e-11
Identities = 55/362 (15%), Positives = 112/362 (30%), Gaps = 95/362 (26%)
Query: 139 RLRNKLSPTFTSGKIKYMFPLIKKCSDQLITTIRKQIGESKQMSLEVKDYCARYTTDVIG 198
R F I+ + I++ + + + GE + D Y V+
Sbjct: 112 AYRGLTLNWFQPASIRKLEENIRRIAQASVQRLLDFDGE---CDF-MTDCALYYPLHVV- 166
Query: 199 STAFGIEINSLENPDSEFRQVSLLVMKPSVLQMLKAVLSELIPLIKYLNLKIFDPRISQF 258
TA G+ P+ + + L++ + +P
Sbjct: 167 MTALGV-------PEDDEPLM--------------LKLTQDF-------FGVHEPDEQAV 198
Query: 259 FSNLVKTNLSYREKNNIKRDDFLNIMMQLQIAQRGKTLSP-DDV-------EMTDDVITA 310
+ + + R + F + R P DDV ++ + I
Sbjct: 199 AAPRQSADEAARRFHETIAT-FYDYFNGF-TVDRRS--CPKDDVMSLLANSKLDGNYIDD 254
Query: 311 QSFVFFF-----GGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHK 365
+ ++ G++T+SS + L+RNP+ + + +
Sbjct: 255 KYINAYYVAIATAGHDTTSSSSGGAIIGLSRNPEQLALAKSD------------------ 296
Query: 366 MSYLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKISIP---TFAIHY---- 418
+ + ++ EA+R + R ++ D + G I + Y
Sbjct: 297 PALIPRLVDEAVRWTAPVKSFMRTALA-------DTEVR-GQNI--KRGDRIMLSYPSAN 346
Query: 419 -DPEYYPDPEKFDPERFSPENIESRPHYTYLPFGDGPRNCIGMRFGTIQFKIGLAQLISN 477
D E + +P++FD R H L FG G C+G ++ KI +L+
Sbjct: 347 RDEEVFSNPDEFDITR------FPNRH---LGFGWGAHMCLGQHLAKLEMKIFFEELLPK 397
Query: 478 FE 479
+
Sbjct: 398 LK 399
>2z3t_A Cytochrome P450; monoxygenase, oxydoreductase, heme-enzyme,
oxidoreductase; HET: HEM; 1.90A {Streptomyces SP} PDB:
2z3u_A* 3a1l_A*
Length = 425
Score = 63.4 bits (155), Expect = 6e-11
Identities = 55/337 (16%), Positives = 109/337 (32%), Gaps = 94/337 (27%)
Query: 139 RLRNKLSPTFTSGKIKYMFPLIKKCSDQLITTIRKQIGESKQMSLEVKDYCARYTTDVIG 198
LR+ L+ F+ + + P I + + L+ +R ++ L V+ + A VI
Sbjct: 108 ELRSLLTTEFSPSIVTGLRPRIAELASALLDRLR----AQRRPDL-VEGFAAPLPILVI- 161
Query: 199 STAFGIEINSLENPDS---EFRQVSLLVMK--------PSVLQMLKAVLSELIPLIKYLN 247
S GI P+ R ++ + + +A E
Sbjct: 162 SALLGI-------PEEDHTWLRANAVALQEASTTRARDGRGYARAEAASQEF-------- 206
Query: 248 LKIFDPRISQFFSNLVKTNLSYREKNNIKRDDFLNIMMQLQIAQRGKTLSPDDVEMTDDV 307
+++F V + RDD L ++++ + ++ D
Sbjct: 207 --------TRYFRREV------DRRGGDDRDDLLTLLVRARD---------TGSPLSVDG 243
Query: 308 ITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMS 367
I G+ET+++ L + L + D+ +LR
Sbjct: 244 IVGTCVHLLTAGHETTTNFLAKAVLTLRAHRDVLDELRTT------------------PE 285
Query: 368 YLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLTLD-----VGTKISIPTFAIHYDPEY 422
+E +R P + + R + D+ L G+++ + + DP
Sbjct: 286 STPAAVEELMRYDPPVQAVTRWAY-------EDIRLGDHDIPRGSRVVALLGSANRDPAR 338
Query: 423 YPDPEKFDPERFSPENIESRPHYTYLPFGDGPRNCIG 459
+PDP+ D R + + FG G C+G
Sbjct: 339 FPDPDVLDVHR------AAERQ---VGFGLGIHYCLG 366
>2cd8_A Cytochrome P450 monooxygenase; oxidoreductase, PIKC, macrolide
monooxygenase, antibiotic biosynthesis, heme, iron,
metal-binding; HET: HEM PXI; 1.7A {Streptomyces
venezuelae} PDB: 2c6h_A* 2bvj_A* 2ca0_A* 2c7x_A* 2vzm_A*
2vz7_A* 2vsj_A* 2wi9_A* 2whw_A*
Length = 436
Score = 63.4 bits (155), Expect = 6e-11
Identities = 63/334 (18%), Positives = 115/334 (34%), Gaps = 92/334 (27%)
Query: 139 RLRNKLSPTFTSGKIKYMFPLIKKCSDQLITTIRKQIGESKQMSLEVKDYCARYTTDVIG 198
RLR ++ FT +++ + P +++ D L+ + L ++ VI
Sbjct: 122 RLRKLVAREFTMRRVELLRPRVQEIVDGLVDAMLAAPDGR--ADL-MESLAWPLPITVI- 177
Query: 199 STAFGIEINSLENPDS---EFRQVSLLVMKPSVLQMLKAVLSELIPLIKYLNLKIFDPRI 255
S G+ P+ FR + + P + ++E+
Sbjct: 178 SELLGV-------PEPDRAAFRVWTDAFVFPDDPAQAQTAMAEMS--------------- 215
Query: 256 SQFFSNLVKTNLSYREKNNIKR----DDFLNIMMQLQIAQRGKTLSPDDVEMTDDVITAQ 311
+ S L+ + KR +D L+ + + D +T + +
Sbjct: 216 -GYLSRLIDS----------KRGQDGEDLLSAL----VRTSD----EDGSRLTSEELLGM 256
Query: 312 SFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSYLDK 371
+ + G+ET+ +++ +Y L +PD + LR + M+ LD
Sbjct: 257 AHILLVAGHETTVNLIANGMYALLSHPDQLAALRAD------------------MTLLDG 298
Query: 372 VTKEALRMYPSLPQ-LDRISVKKYKLPNTDLTLD-----VGTKISIPTFAIHYDPEYYPD 425
+E LR + R V + LD G + + H PE +PD
Sbjct: 299 AVEEMLRYEGPVESATYRFPV-------EPVDLDGTVIPAGDTVLVVLADAHRTPERFPD 351
Query: 426 PEKFDPERFSPENIESRPHYTYLPFGDGPRNCIG 459
P +FD R ++ H L FG G CIG
Sbjct: 352 PHRFDIRR------DTAGH---LAFGHGIHFCIG 376
>1n40_A P450 MT2, cytochrome P450 121; heme binding, oxygen binding, P450
fold, structural genomics, PSI, protein structure
initiative; HET: HEM; 1.06A {Mycobacterium tuberculosis}
SCOP: a.104.1.1 PDB: 1n4g_A* 2ij5_A* 2ij7_A* 3g5f_A*
3g5h_A* 3cy0_A* 3cy1_A* 3cxv_A* 3cxx_A* 3cxz_A* 3cxy_A*
Length = 396
Score = 62.6 bits (153), Expect = 9e-11
Identities = 32/170 (18%), Positives = 60/170 (35%), Gaps = 43/170 (25%)
Query: 298 PDDVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGE 357
P ++D++ FF G ++ S LT L L + P +++ L ++
Sbjct: 213 PAYSHVSDELFATIGVTFFGAGVISTGSFLTTALISLIQRPQLRNLLHEK---------- 262
Query: 358 LTYEICHKMSYLDKVTKEALRMYPSLPQ--LDRISVKKYKLPNTDLTLDVGTKIS----- 410
+ +E LR L R++ D+ + +
Sbjct: 263 --------PELIPAGVEELLR-INLSFADGLPRLAT-------ADIQVG-DVLVRKGELV 305
Query: 411 -IPTFAIHYDPEYYPDPEKFDPERFSPENIESRPHYTYLPFGDGPRNCIG 459
+ ++DPE++P+P + +R +P H L FG G C G
Sbjct: 306 LVLLEGANFDPEHFPNPGSIELDRPNP-----TSH---LAFGRGQHFCPG 347
>4dnj_A Putative cytochrome P450; oxidoreductase; HET: HEM ANN; 1.80A
{Rhodopseudomonas palustris} PDB: 2fr7_A* 4do1_A*
4dnz_A*
Length = 412
Score = 62.3 bits (152), Expect = 1e-10
Identities = 49/331 (14%), Positives = 95/331 (28%), Gaps = 86/331 (25%)
Query: 139 RLRNKLSPTFTSGKIKYMFPLIKKCSDQLITTIRKQIGESKQMSLEVKDYCARYTTDVIG 198
R R LS + +K + +D I + + + + D Y V
Sbjct: 109 RTRAVLSKVLSPATMKRLRDGFAAAADAKIDEL---LARGGNIDA-IADLAEAYPLSVFP 164
Query: 199 STAFGIEINSLENPDSE---FRQVS--LLVMKPSVLQMLKAVLSELIPLIKYLNLKIFDP 253
A G+ + + ++ ++ + P Y+ + P
Sbjct: 165 D-AMGL-------KQEGRENLLPYAGLVFNAFGPPNELRQSAIERSAPHQAYVAEQCQRP 216
Query: 254 RISQFFSNLVKTNLSYREKNNIKRDDFLNIMMQLQIAQRGKTLSPDDVEMTDDVITAQSF 313
+ D E+T +
Sbjct: 217 N---------------------LAPGGFGACIHAFS---------DTGEITPEEAPLLVR 246
Query: 314 VFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSYLDKVT 373
G +T+ + + +Y LAR PD ++LR + S
Sbjct: 247 SLLSAGLDTTVNGIAAAVYCLARFPDEFARLRAD------------------PSLARNAF 288
Query: 374 KEALRMYPSLPQLDRISVKKYKLPNTDLTLD-----VGTKISIPTFAIHYDPEYYPDPEK 428
+EA+R + R + D+ L G K+ + + + DP + DP++
Sbjct: 289 EEAVRFESPVQTFFRTTT-------RDVELAGATIGEGEKVLMFLGSANRDPRRWDDPDR 341
Query: 429 FDPERFSPENIESRPHYTYLPFGDGPRNCIG 459
+D R ++ H + FG G C+G
Sbjct: 342 YDITR------KTSGH---VGFGSGVHMCVG 363
>2rfb_A Cytochrome P450; heme, iron, metal-binding, monooxygenase,
oxidoreductase; HET: HEM; 2.50A {Picrophilus torridus}
PDB: 2rfc_A*
Length = 343
Score = 61.8 bits (151), Expect = 1e-10
Identities = 57/349 (16%), Positives = 114/349 (32%), Gaps = 98/349 (28%)
Query: 139 RLRNKLSPTFTSGKIKYMFPLIKKCSDQLITTIRKQIGESKQMSLEVKDYCARYTTDVIG 198
R+ +P F KI I++ S+ LI K I + + +Y R ++I
Sbjct: 57 EFRDISAPYFLPSKINDYKDFIEETSNDLI----KNIDN---KDI-ISEYAVRLPVNII- 107
Query: 199 STAFGIEINSLENPDSE---FRQVSLLVMKPSVLQMLKAVLSELIPLIKYLNLKIFDPRI 255
S GI PDS+ F+ S ++ + V + ++ +
Sbjct: 108 SKILGI-------PDSDMPLFKLWSDYIIGNKRDENFNYVNNRMVSRL------------ 148
Query: 256 SQFFSNLVKTNLSYREKNNIKRDDFLNIMMQLQIAQRGKTLSPDDVEMTDDVITAQSFVF 315
E +N++ + + ++T D +
Sbjct: 149 --------------LEIFKSDSHGIINVLAGSSL---------KNRKLTMDEKIKYIMLL 185
Query: 316 FFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSYLDKVTKE 375
GG ET+++++ + + NPDI + +E
Sbjct: 186 IIGGNETTTNLIGNMIRVIDENPDIIDDALKNR---------------------SGFVEE 224
Query: 376 ALRMYPSLPQLD-RISVKKYKLPNTDLTLD-----VGTKISIPTFAIHYDPEYYPDPEKF 429
LR Y + L R + + D ++ G ++ + + + D ++ +P+ F
Sbjct: 225 TLRYYSPIQFLPHRFAAE-------DSYINNKKIKKGDQVIVYLGSANRDETFFDEPDLF 277
Query: 430 DPERFSPENIESRPHYTYLPFGDGPRNCIGMRFGTIQFKIGLAQLISNF 478
R H L FG G C+G ++ I L ++++F
Sbjct: 278 KIGR-------REMH---LAFGIGIHMCLGAPLARLEASIALNDILNHF 316
>1jfb_A Nitric-oxide reductase cytochrome P450 55A1; cytochrome P450NOR,
atomic resolutio structural genomics/proteomics
initiative, RSGI; HET: HEM; 1.00A {Fusarium oxysporum}
SCOP: a.104.1.1 PDB: 1jfc_A* 1gej_A* 1ged_A* 1ehe_A*
1gei_A* 1rom_A* 2rom_A* 1ehf_A* 1cl6_A* 1ehg_A* 1cmj_A*
1f25_A* 1f24_A* 1xqd_A* 1f26_A* 1cmn_A* 1ulw_A*
Length = 404
Score = 61.9 bits (151), Expect = 1e-10
Identities = 58/372 (15%), Positives = 117/372 (31%), Gaps = 92/372 (24%)
Query: 103 LIKDFDHFVDRGIGESDAKRDPIEGHLFGSKGEYWKRLRNKLSPTFTSGKIKYMFPLIKK 162
L K + S + + R+ + PTFT +K + P I++
Sbjct: 61 LSKVRTRQGFPELSASGKQAAKAKPTFVDMDPPEHMHQRSMVEPTFTPEAVKNLQPYIQR 120
Query: 163 CSDQLITTIRKQIGESKQMSLEVKDYCARYTTDVIGSTAFGIEINSLENPDS---EFRQV 219
D L+ ++++ + + L VK++ + +I T G+ P + Q
Sbjct: 121 TVDDLLEQMKQKGCANGPVDL-VKEFALPVPSYII-YTLLGV-------PFNDLEYLTQQ 171
Query: 220 S-LLVMKPSVLQMLKAVLSELIPLIKYLNLKIFDPRISQFFSNLVKTNLSYREKNNIKR- 277
+ + S + A EL+ + + LV+ +
Sbjct: 172 NAIRTNGSSTAREASAANQELL----------------DYLAILVEQ----------RLV 205
Query: 278 ---DDFLNIMMQLQIAQRGKTLSPDDVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYEL 334
DD ++ + Q+ + +F+ G T +++ + L
Sbjct: 206 EPKDDIISKLCTEQV---------KPGNIDKSDAVQIAFLLLVAGNATMVNMIALGVATL 256
Query: 335 ARNPDIQSKLRQEIMATKKKEGELTYEICHKMSYLDKVTKEALRMYPSLPQLD--RISVK 392
A++PD ++L+ S + +E R Y + L R +
Sbjct: 257 AQHPDQLAQLKAN------------------PSLAPQFVEELCR-YHTASALAIKRTAK- 296
Query: 393 KYKLPNTDLTLD-----VGTKISIPTFAIHYDPEYYPDPEKFDPERFSPENIESRPHYTY 447
D+ + I + + D E + +P++F+ R P
Sbjct: 297 ------EDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMNRKWPPQ----DP--- 343
Query: 448 LPFGDGPRNCIG 459
L FG G CI
Sbjct: 344 LGFGFGDHRCIA 355
>1lfk_A OXYB, P450 monooxygenase; oxidative phenol coupling reaction P450
vancomycin, oxidoreductase; HET: HEM; 1.70A
{Amycolatopsis orientalis} SCOP: a.104.1.1 PDB: 1lg9_A*
1lgf_A*
Length = 398
Score = 61.9 bits (151), Expect = 2e-10
Identities = 56/355 (15%), Positives = 114/355 (32%), Gaps = 99/355 (27%)
Query: 139 RLRNKLSPTFTSGKIKYMFPLIKKCSDQLITTIRKQIGESKQMSLEVKDYCARYTTDVIG 198
RLR KL+P FT K++ M P I++ + + + + G L + + V+
Sbjct: 98 RLRRKLTPGFTLRKMQRMAPYIEQIVNDRLDEMERA-GSP--ADL-IAFVADKVPGAVL- 152
Query: 199 STAFGIEINSLENPDS---EFRQVSLLVMKPSV-LQMLKAVLSELIPLIKYLNLKIFDPR 254
G+ P F ++ + S+ + A+ +
Sbjct: 153 CELVGV-------PRDDRDMFMKLCHGHLDASLSQKRRAALGDKFS-------------- 191
Query: 255 ISQFFSNLVKTNLSYREKNNIKR----DDFLNIMMQLQIAQRGKTLSPDDVEMTDDVITA 310
++ ++ +R + + + +A+ G + ++ +
Sbjct: 192 --RYLLAMIAR----------ERKEPGEGMIGAV----VAEYGDDATDEE-------LRG 228
Query: 311 QSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSYLD 370
G + S ++ + + R+P+ R +
Sbjct: 229 FCVQVMLAGDDNISGMIGLGVLAMLRHPEQIDAFRGD------------------EQSAQ 270
Query: 371 KVTKEALRMYPSLPQ--LDRISVKKYKLPNTDLTLD-----VGTKISIPTFAIHYDPEYY 423
+ E +R Y ++P RI+ DLTL G + A + DP
Sbjct: 271 RAVDELIR-YLTVPYSPTPRIAR-------EDLTLAGQEIKKGDSVICSLPAANRDPALA 322
Query: 424 PDPEKFDPERFSPENIESRPHYTYLPFGDGPRNCIGMRFGTIQFKIGLAQLISNF 478
PD ++ D R E PH + FG G +C+G ++ + +L F
Sbjct: 323 PDVDRLDVTR------EPIPH---VAFGHGVHHCLGAALARLELRTVFTELWRRF 368
>3mgx_A Putative P450 monooxygenase; cytochrome P450 oxidase, HAEM protein,
vancomycin biosynthes carrier protein, oxidoreductase;
HET: HEM; 2.10A {Amycolatopsis balhimycina}
Length = 415
Score = 61.6 bits (150), Expect = 2e-10
Identities = 47/217 (21%), Positives = 78/217 (35%), Gaps = 51/217 (23%)
Query: 277 RDDFLNIMMQLQIAQRGKTLSP-DDV--------EMTDDVITAQSFVFFFGGYETSSSVL 327
+ L +L I R K P DD+ ++T D + GG ET+ +
Sbjct: 207 HTEILVYFDEL-ITARRK--EPGDDLVSTLVTDDDLTIDDVLLNCDNVLIGGNETTRHAI 263
Query: 328 TFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSYLDKVTKEALRMYPSLPQLD 387
T ++ LA P + + LR + +D V +E LR +
Sbjct: 264 TGAVHALATVPGLLTALRDG------------------SADVDTVVEEVLRWTSPAMHVL 305
Query: 388 RISVKKYKLPNTDLTLD-----VGTKISIPTFAIHYDPEYYPDPEKFDPERFSPENIESR 442
R++ D+T++ GT + A + DP + DP+ F P R +
Sbjct: 306 RVTT-------ADVTINGRDLPSGTPVVAWLPAANRDPAEFDDPDTFLPGR------KPN 352
Query: 443 PHYTYLPFGDGPRNCIGMRFGTIQFKIGLAQLISNFE 479
H + FG G +C+G I+ + L L
Sbjct: 353 RH---ITFGHGMHHCLGSALARIELSVVLRVLAERVS 386
>2z36_A MOXA, cytochrome P450 type compactin 3'',4''- hydroxylase; CYP105,
oxidoreductase; HET: HEM MES; 2.80A {Nonomuraea
recticatena}
Length = 413
Score = 60.7 bits (148), Expect = 4e-10
Identities = 60/402 (14%), Positives = 132/402 (32%), Gaps = 101/402 (25%)
Query: 76 LKLPYGGLYHLMT----PKLMVTDPELYKYILIKDFDHFVDRGIGESDAKRDPIEGHLFG 131
++L GG ++ + ++ D F F + P + G
Sbjct: 40 VRLTSGGQAWWVSGHEEARAVLADGRFSSDKRKDGFPLFTLDAATLQQLRSQP--PLMLG 97
Query: 132 SKGEYWKRLRNKLSPTFTSGKIKYMFPLIKKCSDQLITTIRKQIGESKQMSLEVKDYCAR 191
G R + FT ++ + P I+ D I + + + + L V+
Sbjct: 98 MDGAEHSAARRPVIGEFTVKRLAALRPRIQDIVDHFIDDMLAT--DQRPVDL-VQALSLP 154
Query: 192 YTTDVIGSTAFGIEINSLENPDS---EFRQVSLLVMKPSVLQMLKAVLSELIPLIKYLNL 248
+ VI G+ P + F+ + +++ + ++ + +EL
Sbjct: 155 VPSLVI-CELLGV-------PYTDHDFFQSRTTMMVSRTSMEDRRRAFAELR-------- 198
Query: 249 KIFDPRISQFFSNLVKTNLSYREKNNIKR----DDFLNIMMQLQIAQRGKTLSPDDVEMT 304
+ +L+ K DD + IA++ + +
Sbjct: 199 --------AYIDDLITR----------KESEPGDDLFSRQ----IARQR-----QEGTLD 231
Query: 305 DDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICH 364
+ + +F+ G+ET++++++ + L +P+ + ++
Sbjct: 232 HAGLVSLAFLLLTAGHETTANMISLGVVGLLSHPEQLTVVKAN----------------- 274
Query: 365 KMSYLDKVTKEALRMYPSLPQL--DRISVKKYKLPNTDLTLD-----VGTKISIPTFAIH 417
+E LR Y ++ R++ D+ + G + + + +
Sbjct: 275 -PGRTPMAVEELLR-YFTIADGVTSRLAT-------EDVEIGGVSIKAGEGVIVSMLSAN 325
Query: 418 YDPEYYPDPEKFDPERFSPENIESRPHYTYLPFGDGPRNCIG 459
+DP + DP D ER +R H L FG GP C+G
Sbjct: 326 WDPAVFKDPAVLDVER------GARHH---LAFGFGPHQCLG 358
>2y5n_A MYCG, P-450-like protein; oxidoreductase, mycinamicin biosynthesis;
HET: HEM MYV; 1.62A {Micromonospora griseorubida} PDB:
2y46_A* 2y5z_A* 2y98_A* 2yca_A* 2ygx_A*
Length = 417
Score = 60.7 bits (148), Expect = 4e-10
Identities = 30/168 (17%), Positives = 57/168 (33%), Gaps = 41/168 (24%)
Query: 299 DDVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGEL 358
+++ + + GYE++++ + +Y L P+++ +L
Sbjct: 235 QQDSLSEQELLDLAIGLLVAGYESTTTQIADFVYLLMTRPELRRQLLDR----------- 283
Query: 359 TYEICHKMSYLDKVTKEALRMYPSLPQ--LDRISVKKYKLPNTDLTLD-----VGTKISI 411
+ +E R P R +V D+TL G +
Sbjct: 284 -------PELIPSAVEELTRWVPLGVGTAFPRYAV-------EDVTLRGVTIRAGEPVLA 329
Query: 412 PTFAIHYDPEYYPDPEKFDPERFSPENIESRPHYTYLPFGDGPRNCIG 459
T A + D +PD ++ D +R H L FG G +C+G
Sbjct: 330 STGAANRDQAQFPDADRIDVDR------TPNQH---LGFGHGVHHCLG 368
>2xbk_A PIMD protein; epoxidation, oxidoreductase; HET: HEM XBK; 1.95A
{Streptomyces natalensis} PDB: 2x9p_A*
Length = 404
Score = 60.3 bits (147), Expect = 5e-10
Identities = 32/169 (18%), Positives = 58/169 (34%), Gaps = 43/169 (25%)
Query: 299 DDVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGEL 358
+D E+T+D + + F G ++ +S++ + LA +PD ++ +
Sbjct: 222 NDGELTEDRVAHLAMGLLFAGLDSVASIMDNGVVLLAAHPDQRAAALAD----------- 270
Query: 359 TYEICHKMSYLDKVTKEALRMYPSLPQ---LDRISVKKYKLPNTDLTLD-----VGTKIS 410
+ + +E LR R + D+ G +
Sbjct: 271 -------PDVMARAVEEVLR-TARAGGSVLPPRYAS-------EDMEFGGVTIRAGDLVL 315
Query: 411 IPTFAIHYDPEYYPDPEKFDPERFSPENIESRPHYTYLPFGDGPRNCIG 459
++D + PE+FD R PH L FG G +CIG
Sbjct: 316 FDLGLPNFDERAFTGPEEFDAAR------TPNPH---LTFGHGIWHCIG 355
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 61.2 bits (148), Expect = 5e-10
Identities = 68/405 (16%), Positives = 128/405 (31%), Gaps = 124/405 (30%)
Query: 85 HLMTPKLMVTD--PELYKYILIKDF---DHFVDRGI---GESDAKRDPIEGH-----LFG 131
H + KL+ + + LIK++ R S R EG+ +FG
Sbjct: 102 HALAAKLLQENDTTLVKTKELIKNYITARIMAKRPFDKKSNSALFRAVGEGNAQLVAIFG 161
Query: 132 SKG---EYWKRLRNKLSPTFTSGKIKYMFPLIKKCSDQLITTIRKQIGESKQMSLEVKDY 188
+G +Y++ LR L T+ L+ LI + + E + +L+ +
Sbjct: 162 GQGNTDDYFEELR-DLYQTYH--------VLVG----DLIKFSAETLSELIRTTLDAEKV 208
Query: 189 CARYTTDVIGSTAFGIEINS-LENPDSEFRQVSLLVMKPSVLQMLKAVLSELIPLIKYLN 247
+ G+ I LENP + P +L +S PLI +
Sbjct: 209 FTQ-----------GLNILEWLENPSN----------TPDKDYLLSIPIS--CPLIGVIQ 245
Query: 248 LKIFDPRISQFFSNLVKTNLSYREKNNIKRDDFLNIMMQLQIAQRGKTLSPDDVEMTDDV 307
L + + + E + + +G T + +
Sbjct: 246 L-------AHYVVTAKLLGFTPGE--------LRSYL-------KGATG------HSQGL 277
Query: 308 ITA---------QSFVFFFGGYETSSSVLTFCLY------ELARNPDIQSKLRQEIMATK 352
+TA +SF + + +T + E N + + ++ + +
Sbjct: 278 VTAVAIAETDSWESF------FVSVRKAITVLFFIGVRCYEAYPNTSLPPSILED--SLE 329
Query: 353 KKEGELTYEICHKMSYLDKVTKEALRMY-----PSLPQLDRISVKKYKLPNTDLTLDV-G 406
EG + M + +T+E ++ Y LP ++ + L N L V G
Sbjct: 330 NNEGVPSP-----MLSISNLTQEQVQDYVNKTNSHLPAGKQVEI---SLVNGAKNLVVSG 381
Query: 407 TKISIPTFAIHYDPEYYPDPEKFDPER--FSPENIESRPHYTYLP 449
S+ + P D R FS + + +LP
Sbjct: 382 PPQSLYGLNLTL--RKAKAPSGLDQSRIPFSERKL--KFSNRFLP 422
Score = 48.5 bits (115), Expect = 4e-06
Identities = 60/335 (17%), Positives = 109/335 (32%), Gaps = 124/335 (37%)
Query: 97 ELYK-YILIKD-FD----HFVDR-GIGESDAKRD-PIEG--HLFGSKGEYWKRLRNKLSP 146
+LYK +D ++ HF D G D + P+ H G KG KR+R
Sbjct: 1634 DLYKTSKAAQDVWNRADNHFKDTYGFSILDIVINNPVNLTIHFGGEKG---KRIREN--- 1687
Query: 147 TFTSGKIKYMFPLIKKCSDQLITT--IRKQIGESKQMSLEVKDYCARYTTDVIGSTAFGI 204
Y + + D + T I K+I E Y R ++ +T
Sbjct: 1688 --------YSAMIFETIVDGKLKTEKIFKEINEH------STSYTFRSEKGLLSAT---- 1729
Query: 205 EINSLENPDSEFRQVSLLVMKPSVLQMLKAVLSE-LIPLIKYL---NL----------KI 250
+F Q +L +M+ + + LK S+ LIP +L +
Sbjct: 1730 ----------QFTQPALTLMEKAAFEDLK---SKGLIPADATFAGHSLGEYAALASLADV 1776
Query: 251 FDPRISQFFSNLVKTNLSYR---EKNNIKRDDFLNI---MMQLQIAQRGKTLSPDDVEMT 304
+LV+ + YR + + RD+ M+ + + + S + ++
Sbjct: 1777 MS------IESLVEV-VFYRGMTMQVAVPRDELGRSNYGMIAINPGRVAASFSQEALQYV 1829
Query: 305 DDVITAQSFVFFFGGYETSSSVLTFCLYELARN---PDIQSKLRQEIMATKKKEGELTYE 361
+ + ++ G E+ N + +Q + A G+L
Sbjct: 1830 VERVGKRT-----GW---------LV--EIV-NYNVEN-----QQYVAA-----GDL--- 1859
Query: 362 ICHKMSYLDKVTKEALRMYPSLPQLDRISVKKYKL 396
LD VT L+ I ++K +
Sbjct: 1860 -----RALDTVTNV----------LNFIKLQKIDI 1879
Score = 37.0 bits (85), Expect = 0.016
Identities = 55/291 (18%), Positives = 82/291 (28%), Gaps = 92/291 (31%)
Query: 259 FSNLVKTNLSYREKNNIKRDDFLNIMMQLQIAQRGKTL-SPDDVEMTDDVITAQ-SFVFF 316
LV T + + ++ F K L P + DD T V
Sbjct: 18 HVLLVPTASFFIA--SQLQEQFN------------KILPEPTEGFAADDEPTTPAELVGK 63
Query: 317 FGGYETS----------SSVLTFCLYE-----LARNPDIQS---KLRQEIMATKKKEGEL 358
F GY +S VL CL E L N DI + KL QE T K EL
Sbjct: 64 FLGYVSSLVEPSKVGQFDQVLNLCLTEFENCYLEGN-DIHALAAKLLQENDTTLVKTKEL 122
Query: 359 --TY-----------EICHKMSYLDKVTKEALRMYPS----------LPQLDRISVKKYK 395
Y + + V + ++ +L R + Y
Sbjct: 123 IKNYITARIMAKRPFDKKSNSALFRAVGEGNAQLVAIFGGQGNTDDYFEEL-RDLYQTYH 181
Query: 396 LPNTDLTLDVGTKISIPTFAIHYDPEYYPDPEKFDPERFSPENIESRPHYTYL------- 448
+ DL +S + + + + EN + P YL
Sbjct: 182 VLVGDLIKFSAETLSELIRTTLDAEKVFTQG--LNILEWL-ENPSNTPDKDYLLSIPISC 238
Query: 449 PFGDGPRNCIGMRFGTIQFKIGLAQLISNFEFSIDSANAT----FEYLKGS 495
P IG+ QL +++ + T YLKG+
Sbjct: 239 PL------------------IGVIQL-AHYVVTAKLLGFTPGELRSYLKGA 270
Score = 31.2 bits (70), Expect = 1.1
Identities = 34/193 (17%), Positives = 59/193 (30%), Gaps = 83/193 (43%)
Query: 57 SRITFHQMHCEFYNKIKYDLK-LPYGGLYH--LMTPKLMVTDPELYKY-ILIKDFD---- 108
SRI F + K+K+ + LP +H L+ P + + +L K + D
Sbjct: 405 SRIPFSER------KLKFSNRFLPVASPFHSHLLVPASDLINKDLVKNNVSFNAKDIQIP 458
Query: 109 --HFVD----RGIGESDAK-------RDPIEGHLFGSKGEYWKRLRNKLSPT----FTSG 151
D R + S ++ R P+ W+ + T F G
Sbjct: 459 VYDTFDGSDLRVLSGSISERIVDCIIRLPV----------KWETT-TQFKATHILDFGPG 507
Query: 152 KIKYMFPLIKKCSDQLITTIRKQIGESKQMSLEVKDYCARYTTDVIGSTAFGIEI---NS 208
+ L + KD G+ G+ + +
Sbjct: 508 GASGLGVLTHR----------------------NKD----------GT---GVRVIVAGT 532
Query: 209 LE-NPDSE--FRQ 218
L+ NPD + F+Q
Sbjct: 533 LDINPDDDYGFKQ 545
>2jjn_A Cytochrome P450 113A1; oxidoreductase, iron, heme, monooxygenase,
metal-binding, AN biosynthesis, TIE-ROD mechanism of
action; HET: HEM; 1.59A {Saccharopolyspora erythraea}
PDB: 2jjo_A* 2jjp_A* 2xfh_A* 2wio_A* 2vrv_A*
Length = 411
Score = 60.0 bits (146), Expect = 6e-10
Identities = 29/166 (17%), Positives = 54/166 (32%), Gaps = 37/166 (22%)
Query: 299 DDVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGEL 358
D + D+ S G+ T++ +L + L +P ++
Sbjct: 222 DGRALDDEEAANFSTALLLAGHITTTVLLGNIVRTLDEHPAHWDAAAED----------- 270
Query: 359 TYEICHKMSYLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLTLD-----VGTKISIPT 413
+ + +E LR P PQ+ R + K + ++
Sbjct: 271 -------PGRIPAIVEEVLRYRPPFPQMQRTTTK-------ATEVAGVPIPADVMVNTWV 316
Query: 414 FAIHYDPEYYPDPEKFDPERFSPENIESRPHYTYLPFGDGPRNCIG 459
+ + D + + DP++FDP R L FG G C+G
Sbjct: 317 LSANRDSDAHDDPDRFDPSR----KSGGAAQ---LSFGHGVHFCLG 355
>3p3o_A Cytochrome P450; monooxygenase, oxidoreductase; HET: HEM; 1.54A
{Streptomyces thioluteus} PDB: 3p3x_A* 3p3z_A* 3p3l_A*
Length = 416
Score = 60.0 bits (146), Expect = 7e-10
Identities = 64/379 (16%), Positives = 119/379 (31%), Gaps = 94/379 (24%)
Query: 94 TDPELYKYILIKDFDHFVDRGIGESDAKRDPIEGHLFGSKGEYWKRLRNKLSPTFTSGKI 153
D L I F VD RD + L G +RLR + FT +I
Sbjct: 70 RDKRL-----ISGFRGLVDMVGTPEGPVRDFMVDFLQSLDGADHRRLRGLATHPFTPRRI 124
Query: 154 KYMFPLIKKCSDQLITTIRKQIGESKQMSLEVKDYCARYTTDVIGSTAFGIEINSLENPD 213
+ P ++ +QLI + V+ + V+ G P
Sbjct: 125 TAVQPFVRSTVEQLIDKL-----PQGDFDF-VQHFPHPLPALVM-CQLLGF-------PL 170
Query: 214 SE---FRQVSLLVMKPSVLQMLKAVLSELIPLIKYLNLKIFDPRISQFFSNLVKTNLSYR 270
+ ++S+ L + +L ++ + + + ++
Sbjct: 171 EDYDTVGRLSIETNLGLALSNDQDILVKVEQGLGRMF---------DYLVAAIEK----- 216
Query: 271 EKNNIKR----DDFLNIMMQLQIAQRGKTLSPDDVEMTDDVITAQSFVFFFGGYETSSSV 326
++ DD + + + D + D + GYET++
Sbjct: 217 -----RKVEPGDDLTSDI----VRAF------HDGVLDDYELRTLVATVLVAGYETTNHQ 261
Query: 327 LTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSYLDKVTKEALRMYPSLPQ- 385
L +Y+ A++PD K+++ + +E LR P+LP
Sbjct: 262 LALAMYDFAQHPDQWMKIKEN------------------PELAPQAVEEVLRWSPTLPVT 303
Query: 386 LDRISVKKYKLPNTDLTLD-----VGTKISIPTFAIHYDPEYYPDPEKFDPERFSPENIE 440
R++ D ++ GT + + H DP + D ++FD
Sbjct: 304 ATRVAA-------EDFEVNGVRIPTGTPVFMCAHVAHRDPRVFADADRFDITVKRE---- 352
Query: 441 SRPHYTYLPFGDGPRNCIG 459
P + FG GP C+G
Sbjct: 353 -APS---IAFGGGPHFCLG 367
>2zbx_A Cytochrome P450-SU1; beta prism, heme, iron, metal-binding,
monooxygenase, oxidoreductase; HET: HEM; 1.50A
{Streptomyces griseolus} PDB: 2zby_A* 2zbz_A* 3cv8_A*
3cv9_A*
Length = 412
Score = 59.9 bits (146), Expect = 7e-10
Identities = 31/168 (18%), Positives = 64/168 (38%), Gaps = 42/168 (25%)
Query: 299 DDVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGEL 358
+ E+ + + + + + G+ET++S+ + + L +P+ + LR +
Sbjct: 225 ANGEIDREELISTAMLLLIAGHETTASMTSLSVITLLDHPEQYAALRAD----------- 273
Query: 359 TYEICHKMSYLDKVTKEALRMYPSLPQL--DRISVKKYKLPNTDLTLD-----VGTKISI 411
S + +E LR Y ++ + R++ D+ ++ G + +
Sbjct: 274 -------RSLVPGAVEELLR-YLAIADIAGGRVAT-------ADIEVEGQLIRAGEGVIV 318
Query: 412 PTFAIHYDPEYYPDPEKFDPERFSPENIESRPHYTYLPFGDGPRNCIG 459
+ D Y DP+ D R +R H L FG G C+G
Sbjct: 319 VNSIANRDGTVYEDPDALDIHR------SARHH---LAFGFGVHQCLG 357
>3aba_A Cytochrome P450; oxidoreductase, heme, monooxygenase, macrolide,
filipi metal-binding, oxidoreductase-antibiotic complex;
HET: HEM FLI; 1.80A {Streptomyces avermitilis} PDB:
3e5j_A* 3e5k_A* 3e5l_A*
Length = 403
Score = 59.9 bits (146), Expect = 7e-10
Identities = 35/168 (20%), Positives = 62/168 (36%), Gaps = 42/168 (25%)
Query: 299 DDVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGEL 358
D + D + + ++T++ ++ L +PD + LR++
Sbjct: 218 PDGVVDDMFLMNAAGTLLIAAHDTTACMIGLGTALLLDSPDQLALLRED----------- 266
Query: 359 TYEICHKMSYLDKVTKEALRMYPSLPQL--DRISVKKYKLPNTDLTLD-----VGTKISI 411
S + +E LR Y ++ Q +R++ D+ L G ++
Sbjct: 267 -------PSLVGNAVEELLR-YLTIGQFGGERVAT-------RDVELGGVRIAKGEQVVA 311
Query: 412 PTFAIHYDPEYYPDPEKFDPERFSPENIESRPHYTYLPFGDGPRNCIG 459
A +DP + +PE+FD R PH L FG G CIG
Sbjct: 312 HVLAADFDPAFVEEPERFDITR------RPAPH---LAFGFGAHQCIG 350
>2xkr_A CYP142, putative cytochrome P450 142; oxidoreductase; HET: HEM;
1.60A {Mycobacterium tuberculosis}
Length = 398
Score = 59.6 bits (145), Expect = 8e-10
Identities = 36/185 (19%), Positives = 68/185 (36%), Gaps = 39/185 (21%)
Query: 299 DDVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGEL 358
D ++DD + ++ + GG ET+ L+ +L RN D L+++
Sbjct: 211 DGERLSDDELVMETLLILIGGDETTRHTLSGGTEQLLRNRDQWDLLQRD----------- 259
Query: 359 TYEICHKMSYLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLTLD-----VGTKISIPT 413
S L +E LR + + R+ D G K+ +
Sbjct: 260 -------PSLLPGAIEEMLRWTAPVKNMCRVLT-------ADTEFHGTALCAGEKMMLLF 305
Query: 414 FAIHYDPEYYPDPEKFDPERFSPENIESRPHYTYLPFGDGPRNCIGMRFGTIQFKIGLAQ 473
+ ++D + +PEKFD +R H L FG G C+G + ++ + +
Sbjct: 306 ESANFDEAVFCEPEKFDVQR------NPNSH---LAFGFGTHFCLGNQLARLELSLMTER 356
Query: 474 LISNF 478
++
Sbjct: 357 VLRRL 361
>2yjn_B Erycii, DTDP-4-keto-6-deoxy-hexose 3,4-isomerase; transferase,
cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Length = 381
Score = 59.7 bits (145), Expect = 8e-10
Identities = 23/180 (12%), Positives = 52/180 (28%), Gaps = 44/180 (24%)
Query: 304 TDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEIC 363
D + A F G E +++ + + ++ P + ++ +
Sbjct: 213 ADPALRA-----LFAGAEMTANTVVDAVLAVSAEPGLAERIADD---------------- 251
Query: 364 HKMSYLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLTLD-----VGTKISIPTFAIHY 418
+ + E LR++P+L R + ++ L G ++ + A +
Sbjct: 252 --PAAAQRTVAEVLRLHPALHLERRTAT-------AEVRLGEHVIGEGEEVVVVVAAANR 302
Query: 419 DPEYYPDPEKFDPERFSPENIESRPHYTYLPFGDGPRNCIGMRFGTIQFKIGLAQLISNF 478
DPE + +P++ D +R T L
Sbjct: 303 DPEVFAEPDRLDVDR------PDADR---ALSAHRGHPGRLEELVTALATAALRAAAKAL 353
>3tyw_A Putative cytochrome P450; P450 monooxygenase, oxidoreductase; HET:
HEM; 2.90A {Streptomyces coelicolor}
Length = 417
Score = 59.6 bits (145), Expect = 9e-10
Identities = 67/403 (16%), Positives = 127/403 (31%), Gaps = 106/403 (26%)
Query: 76 LKLPYGGLYHLMT----PKLMVTDPELYKYILIKDFDHFVDRGIGESDAKRDPIEGHLFG 131
+ LP ++T + +++DP + D +GE + +
Sbjct: 47 VTLPTRREAWVVTRYDDVRELLSDPRV-----SADIRRPGFPALGEGEQEAGARFRPFIR 101
Query: 132 SKGEYWKRLRNKLSPTFTSGKIKYMFPLIKKCSDQLITTIRKQIGESKQMSLEVKDYCAR 191
+ R R L P FT +++ M P ++ D+++ + G + L V Y
Sbjct: 102 TDAPEHTRYRRMLLPAFTVRRVRAMRPAVQARVDEILDGMLAAGGP---VDL-VSAYANA 157
Query: 192 YTTDVIGSTAFGIEINSLENPDS---EFRQVSLLVMKPSV-LQMLKAVLSELIPLIKYLN 247
+T VI GI P FR V+ + + + + L L
Sbjct: 158 VSTSVI-CELLGI-------PRHDLEFFRDVTRISGSRNSTAEQVSEALGGLF------- 202
Query: 248 LKIFDPRISQFFSNLVKTNLSYREKNNIKR----DDFLNIMMQLQIAQRGKTLSPDDVEM 303
LV +R DD ++ + + +
Sbjct: 203 ---------GLLGGLVAE----------RREEPRDDLISKL----VTDHL-----VPGNV 234
Query: 304 TDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEIC 363
T + + + + G ET++S++ L P++ ++LR++
Sbjct: 235 TTEQLLSTLGITINAGRETTTSMIALSTLLLLDRPELPAELRKD---------------- 278
Query: 364 HKMSYLDKVTKEALRMYPSLPQL--DRISVKKYKLPNTDLTLD-----VGTKISIPTFAI 416
+ E LR S+ R++ D+ L +
Sbjct: 279 --PDLMPAAVDELLR-VLSVADSIPLRVAA-------EDIELSGRTVPADDGVIALLAGA 328
Query: 417 HYDPEYYPDPEKFDPERFSPENIESRPHYTYLPFGDGPRNCIG 459
++DPE + DPE+ D R H + FG G C+G
Sbjct: 329 NHDPEQFDDPERVDFHR------TDNHH---VAFGYGVHQCVG 362
>1ued_A P450 OXYC, P450 monooxygenase; cytochrome P450 vancomycin
biosynthesis, oxidoreductase; HET: HEM PG4; 1.90A
{Amycolatopsis orientalis} SCOP: a.104.1.1
Length = 406
Score = 58.4 bits (142), Expect = 2e-09
Identities = 32/168 (19%), Positives = 54/168 (32%), Gaps = 42/168 (25%)
Query: 299 DDVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGEL 358
+TD+ + GG ET + ++ F + L NP L +
Sbjct: 226 HGDNVTDEELKGLCTALILGGVETVAGMIGFGVLALLDNPGQIELLFES----------- 274
Query: 359 TYEICHKMSYLDKVTKEALRMYPSLPQL--DRISVKKYKLPNTDLTLD-----VGTKISI 411
++V E +R Y S Q R+++ D+ +D G +
Sbjct: 275 -------PEKAERVVNELVR-YLSPVQAPNPRLAI-------KDVVIDGQLIKAGDYVLC 319
Query: 412 PTFAIHYDPEYYPDPEKFDPERFSPENIESRPHYTYLPFGDGPRNCIG 459
+ D PDP+ D R + + FG G C+G
Sbjct: 320 SILMANRDEALTPDPDVLDANR------AAVSD---VGFGHGIHYCVG 358
>2dkk_A Cytochrome P450; CYP158A1, INHI oxidoreductase; HET: HEM; 1.97A
{Streptomyces coelicolor} PDB: 2nz5_A* 2nza_A*
Length = 411
Score = 58.4 bits (142), Expect = 2e-09
Identities = 60/381 (15%), Positives = 113/381 (29%), Gaps = 105/381 (27%)
Query: 94 TDPELYKYILIKDFDHFVDRGIGESDAKRDPIEGHLFGSKGEYWKRLRNKLSPTFTSGKI 153
DP + R I P G L + RLR ++ FT G
Sbjct: 68 NDPRFGR-------AEVTQRQITRLAPHFKPRPGSLAFADQPDHNRLRRAVAGAFTVGAT 120
Query: 154 KYMFPLIKKCSDQLITTIRKQIGESKQMSLEVKDYCARYTTDVIGSTAFGIEINSLENPD 213
K + P ++ D L+ I + G L V+ + V+ S G+ P
Sbjct: 121 KRLRPRAQEILDGLVDGILAE-GPP--ADL-VERVLEPFPIAVV-SEVMGV-------PA 168
Query: 214 S---EFRQVSLLVMKPSV-LQMLKAVLSELIPLIKYLNLKIFDPRISQFFSNLVKTNLSY 269
+ + ++ S + + L + + V+
Sbjct: 169 ADRERVHSWTRQIISTSGGAEAAERAKRGLY----------------GWITETVRA---- 208
Query: 270 REKNNIKR----DDFLNIMMQLQIAQRGKTLSPDDVEMTDDVITAQSFVFFFGGYETSSS 325
+ D +++ A E+ + + GG + +
Sbjct: 209 ------RAGSEGGDVYSML----GAAV------GRGEVGETEAVGLAGPLQIGGEAVTHN 252
Query: 326 VLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSYLDKVTKEALRMYPSLPQ 385
+ LY L ++ +++R+ E LR
Sbjct: 253 -VGQMLYLLLTRRELMARMRER------------------PGARGTALDELLRWISHRTS 293
Query: 386 --LDRISVKKYKLPNTDLTLD-----VGTKISIPTFAIHYDPEYYPDPEKFDPERFSPEN 438
L RI++ D+ + G + + A + DP+ +PDP++ D +R
Sbjct: 294 VGLARIAL-------EDVEVHGTRIAAGEPVYVSYLAANRDPDVFPDPDRIDLDR----- 341
Query: 439 IESRPHYTYLPFGDGPRNCIG 459
+ PH L +G+G C G
Sbjct: 342 -DPNPH---LAYGNGHHFCTG 358
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis,
programmed cell death; HET: DTP; 6.90A {Drosophila
melanogaster} PDB: 3iz8_A*
Length = 1221
Score = 58.7 bits (141), Expect = 3e-09
Identities = 62/417 (14%), Positives = 118/417 (28%), Gaps = 119/417 (28%)
Query: 89 PKLMVTDPELYKYI---LIKDFDH---FVD--RGIGES----DAKRD-PIEGHLFGSKGE 135
K V+ + Y + L++ +D G G++ D ++ +
Sbjct: 127 AKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDF--KI 184
Query: 136 YWKRLRNKLSPTFTSGKIKYMFPLIKKCSDQLI---TTIRKQIGESKQ---MSLEVKDYC 189
+W L+N SP ++ + I + I+ +I + L+ K Y
Sbjct: 185 FWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYE 244
Query: 190 AR-------YTTDVIGSTAFGIEINSL--ENPDSEFRQVSLLVMKPSVLQMLKAVLSE-- 238
AF + L +S L L+
Sbjct: 245 NCLLVLLNVQNAKAW--NAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDE 302
Query: 239 -LIPLIKYLNLKIFD-PR------------ISQFFSNLVKTNLSYREKNNIKRDDFLNIM 284
L+KYL+ + D PR I++ + + T +++ N K L +
Sbjct: 303 VKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDK----LTTI 358
Query: 285 MQLQIAQRGKTLSPDDVE--------MTDDV-ITAQSFVFFFGGYETSSSVLTFCLYELA 335
++ + L P + I + S
Sbjct: 359 IESSLNV----LEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDV---------- 404
Query: 336 RNPDIQSKLRQEIMATKKKEGELTYEICHKMSYLDKVTKEALRMYPSLPQLDRISVKKYK 395
++ K HK S ++K KE+ PS+ L+ K
Sbjct: 405 -----------MVVVNK----------LHKYSLVEKQPKESTISIPSI-YLE------LK 436
Query: 396 LPNTDLTLDVGTKISIPTFAIHYD-PEYYPDPEKFDPERFSPENIESRPHYTYLPFG 451
+ + A+H ++Y P+ FD + P ++ Y Y G
Sbjct: 437 VKLENEY------------ALHRSIVDHYNIPKTFDSDDLIPPYLDQ---YFYSHIG 478
Score = 50.6 bits (120), Expect = 1e-06
Identities = 72/493 (14%), Positives = 142/493 (28%), Gaps = 137/493 (27%)
Query: 2 TLLTNSLVLDTLVLCSLPLIFLFIKSIFNYRYWKNKNVFYFSPTFPFGNYG--AGFLSRI 59
T + + L V C + +F+ + N L +
Sbjct: 164 TWVALDVCLSYKVQCKMDF-----------------KIFWLN----LKNCNSPETVLEML 202
Query: 60 T--FHQMHCEFYNKIKYDLKLPY------GGLYHLMTPK-----LMVTDPELYKYILIKD 106
+Q+ + ++ + + L L+ K L+V +
Sbjct: 203 QKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLL-NVQNAKAWNA 261
Query: 107 FDH-----FVDRGIGESDAKRDPIEGHLFGSKGEYWKRLRNKLSPTFTSGKIKYMF---- 157
F+ R +D H+ + S T T ++K +
Sbjct: 262 FNLSCKILLTTRFKQVTDFLSAATTTHISL----------DHHSMTLTPDEVKSLLLKYL 311
Query: 158 --------PLIKKCSDQLITTIRKQIGESKQMSLEVKDYCARYTTDVIGSTAFGIEINSL 209
+ + + + I ES + L D D + +T +N L
Sbjct: 312 DCRPQDLPREVLTTNPRRL----SIIAESIRDGLATWDNWKHVNCDKL-TTIIESSLNVL 366
Query: 210 ENPDSEFRQ--VSLLVMKPSVLQMLKAVLSELIPLIKYLNLKIFDPR-ISQFFSN--LVK 264
E P E+R+ L V PS +LS + + ++ D + LV+
Sbjct: 367 E-PA-EYRKMFDRLSVFPPSAHIPTI-LLSLI-----WFDVIKSDVMVVVNKLHKYSLVE 418
Query: 265 TN------------LSYREKNNIKRDDFLNIMMQLQIAQRGKTLSPDD-VEMTDDVITAQ 311
L + K + +I+ I KT DD + D
Sbjct: 419 KQPKESTISIPSIYLELKVKLENEYALHRSIVDHYNIP---KTFDSDDLIPPYLD----- 470
Query: 312 SFVFFFGGY-----ETSSSVLTFCLYELARNPD---IQSKLRQEIMATKKKEGELTYEIC 363
+ + G+ E + F + L D ++ K+R + +
Sbjct: 471 QYFYSHIGHHLKNIEHPERMTLFRMVFL----DFRFLEQKIRHD-----------STAWN 515
Query: 364 HKMSYLDKVTKEALRMY-----PSLPQLDRISVKKYK--LPNTDLTLDVGTKISIPTFAI 416
S L+ + + L+ Y + P+ +R+ V LP + L + A+
Sbjct: 516 ASGSILNTLQQ--LKFYKPYICDNDPKYERL-VNAILDFLPKIEENLICSKYTDLLRIAL 572
Query: 417 HYDPE-YYPDPEK 428
+ E + + K
Sbjct: 573 MAEDEAIFEEAHK 585
>1io7_A Cytochrome P450 CYP119; thermophilic, cytochromo P450, riken
structural genomics/proteomics initiative, RSGI,
structural genomics; HET: HEM; 1.50A {Sulfolobus
solfataricus} SCOP: a.104.1.1 PDB: 1f4u_A* 1f4t_A*
1io9_A* 1io8_A*
Length = 368
Score = 56.8 bits (138), Expect = 6e-09
Identities = 54/349 (15%), Positives = 119/349 (34%), Gaps = 97/349 (27%)
Query: 139 RLRNKLSPTFTSGKIKYMFPLIKKCSDQLITTIRKQIGESKQMSLEVKDYCARYTTDVIG 198
LR+ + F+ K++ + I++ + L+ +I + ++ + VK VI
Sbjct: 78 ELRSMSADIFSPQKLQTLETFIRETTRSLLDSI-----DPREDDI-VKKLAVPLPIIVI- 130
Query: 199 STAFGIEINSLENPDSE---FRQVS-LLVMKPSVLQMLKAVLSELIPLIKYLNLKIFDPR 254
S G+ P + F++ S L+ + + + + + LI Y+ +
Sbjct: 131 SKILGL-------PIEDKEKFKEWSDLVAFRLGKPGEIFELGKKYLELIGYVK-DHLNSG 182
Query: 255 ISQFFSNLVKTNLSYREKNNIKRDDFLNIMMQLQIAQRGKTLSPDDVEMTDDVITAQSFV 314
+ ++ ++ ++D +
Sbjct: 183 -----------------------TEVVSRVVN--------------SNLSDIEKLGYIIL 205
Query: 315 FFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSYLDKVTK 374
G ET++++++ + + R ++R+E + K +
Sbjct: 206 LLIAGNETTTNLISNSVIDFTRFNL-WQRIREE-------------------NLYLKAIE 245
Query: 375 EALRMYPSLPQLDRISVKKYKLPNTDLTLD-----VGTKISIPTFAIHYDPEYYPDPEKF 429
EALR P + + R + + + L G + + + + D E + D EKF
Sbjct: 246 EALRYSPPVMRTVRKTKE-------RVKLGDQTIEEGEYVRVWIASANRDEEVFHDGEKF 298
Query: 430 DPERFSPENIESRPHYTYLPFGDGPRNCIGMRFGTIQFKIGLAQLISNF 478
P+R PH L FG G C+G ++ +I + + F
Sbjct: 299 IPDR------NPNPH---LSFGSGIHLCLGAPLARLEARIAIEEFSKRF 338
>3ivy_A Cytochrome P450 CYP125; cholesterol, monooxygenase, H iron,
metal-binding, oxidoreductase; HET: HEM; 1.35A
{Mycobacterium tuberculosis} PDB: 3iw0_A* 3iw1_A*
3iw2_A* 2x5w_A* 2x5l_A* 2xc3_A* 2xn8_A*
Length = 433
Score = 56.5 bits (137), Expect = 7e-09
Identities = 50/347 (14%), Positives = 106/347 (30%), Gaps = 79/347 (22%)
Query: 139 RLRNKLSPTFTSGKIKYMFPLIKKCSDQLITTIRKQIGESKQMSLEVKDYCARYTTDVIG 198
RLR +S FT + + +++ + ++ G V+ I
Sbjct: 126 RLRKIISRGFTPRAVGRLHDELQERAQKIAAEAAAA-GS---GDF-VEQVSCELPLQAI- 179
Query: 199 STAFGIEINSLENPDSEFRQVSLLVMKPSVLQMLKAVLSELIPLIKYLNLKIFDPRISQF 258
+ G+ P + ++ + P +++ K + +
Sbjct: 180 AGLLGV-------PQEDRGKLFHWS---------NEMTGNEDPEYAHIDPKASSAELIGY 223
Query: 259 FSNLVKTNLSYREKNNIKRDDFLNIMMQLQIAQRGKTLSPDDVEMTDDVITAQSFVFFFG 318
+ + + KN DD + ++Q I D +++DD +
Sbjct: 224 AMKMAEE----KAKNP--ADDIVTQLIQADI---------DGEKLSDDEFGFFVVMLAVA 268
Query: 319 GYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSYLDKVTKEALR 378
G ET+ + +T + A +PD ++ T E +R
Sbjct: 269 GNETTRNSITQGMMAFAEHPDQWELYKKVRPET--------------------AADEIVR 308
Query: 379 MYPSLPQLDRISVKKYKLPNTDLTLD-----VGTKISIPTFAIHYDPEYYPDPEKFDPER 433
+ R +++ D L G ++ + + ++D E + DP F+ R
Sbjct: 309 WATPVTAFQRTALR-------DYELSGVQIKKGQRVVMFYRSANFDEEVFQDPFTFNILR 361
Query: 434 FSPENIESRPHYTYLPF-GDGPRNCIGMRFGTIQFKIGLAQLISNFE 479
PH + F G G CIG + + + +
Sbjct: 362 ------NPNPH---VGFGGTGAHYCIGANLARMTINLIFNAVADHMP 399
>3oo3_A OXY protein; cytochrome P450, monooxygenase, PCD-teicoplanin
aglycone, oxidoreductase; HET: HEM; 2.20A {Actinoplanes
teichomyceticus} PDB: 3o1a_A*
Length = 384
Score = 56.1 bits (136), Expect = 1e-08
Identities = 56/382 (14%), Positives = 123/382 (32%), Gaps = 104/382 (27%)
Query: 92 MVTDPELYKYILIKDFDHFVDRGIGESDAKRDPIEGHLFGSKGEYWKRLRNKLSPTFTSG 151
+VT + + IL D + F + +A R + G L RLR ++P +++
Sbjct: 43 LVTGHDEVRAIL-ADHERFSSMRPVDDEADRALLPGILQAYDPPDHTRLRRTVAPAYSAR 101
Query: 152 KIKYMFPLIKKCSDQLITTIRKQIGESKQMSLEVKDYCARYTTDVIGSTAFGIEINSLEN 211
+++ + P I++ ++ + G + V+ + G+
Sbjct: 102 RMERLRPRIEEIVEECLDDFESV-GAP--VDF-VRHAAWPIPAYIA-CEFLGV------- 149
Query: 212 PDS---EFRQVSLLVMKPSVLQMLKAVLSELIPLIKYLNLKIFDPRISQFFSNLVKTNLS 268
P E ++ + + + ++ + L
Sbjct: 150 PRDDQAELSRMIRESRESRLPRQRTLSGLGIV----------------NYTKRLTSG--- 190
Query: 269 YREKNNIKR----DDFLNIMMQLQIAQRGKTLSPDDVEMTDDVITAQSFVFFFGGYETSS 324
KR D + ++ + + G +S ++ + + E +
Sbjct: 191 -------KRRDPGDGMIGVI----VREHGAEISDEE-------LAGLAEGNLIMAAEQMA 232
Query: 325 SVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSYLDKVTKEALRMYPSLP 384
+ L + L +PD + LR++ +D T+E LR + S+
Sbjct: 233 AQLAVAVLLLVTHPDQMALLREK------------------PELIDSATEEVLR-HASIV 273
Query: 385 QL--DRISVKKYKLPNTDLTLD-----VGTKISIPTFAIHYDPEYYPDPEKFDPERFSPE 437
+ R+++ D+ + G ++ A + P ++FD R
Sbjct: 274 EAPAPRVAL-------ADVRMAGRDIHAGDVLTCSMLATNRAP-----GDRFDITR---- 317
Query: 438 NIESRPHYTYLPFGDGPRNCIG 459
E H + FG G +CIG
Sbjct: 318 --EKATH---MAFGHGIHHCIG 334
>1s1f_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP158A2,
anti biosynthesis, oxidoreductase; HET: HEM PIM; 1.50A
{Streptomyces coelicolor} SCOP: a.104.1.1 PDB: 1se6_A*
2d0e_A* 1t93_A* 2d09_A* 3tzo_A*
Length = 406
Score = 55.7 bits (135), Expect = 1e-08
Identities = 63/377 (16%), Positives = 126/377 (33%), Gaps = 97/377 (25%)
Query: 94 TDPELYKYILIKDFDHFVDRGIGESDAKRDPIEGHLFGSKGEYWKRLRNKLSPTFTSGKI 153
DP + + +DR + P G + RLR ++ FT+ +
Sbjct: 65 NDPRFGR-------EAVMDRQVTRLAPHFIPARGAVGFLDPPDHTRLRRSVAAAFTARGV 117
Query: 154 KYMFPLIKKCSDQLITTIRKQIGESKQMSLEVKDYCARYTTDVIGSTAFGIEINSLENPD 213
+ + + D+L+ + + G L + + + VI G+ P
Sbjct: 118 ERVRERSRGMLDELVDAMLRA-GPP--ADL-TEAVLSPFPIAVI-CELMGV-------PA 165
Query: 214 S---EFRQVSLLVMKPSV-LQMLKAVLSELIPLIKYLNLKIFDPRISQFFSNLVKTNLSY 269
+ + L++ S ++ + +E+ + +FS+L+
Sbjct: 166 TDRHSMHTWTQLILSSSHGAEVSERAKNEM----------------NAYFSDLI------ 203
Query: 270 REKNNIKRDDFLNIMMQLQIAQRGKTLSPDDVEMTDDVITAQSFVFFFGGYETSSSVLTF 329
+++ +D +++ A E+T + + GG +++
Sbjct: 204 GLRSDSAGEDVTSLL----GAAV------GRDEITLSEAVGLAVLLQIGGEAVTNN-SGQ 252
Query: 330 CLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSYLDKVTKEALRMYP--SLPQLD 387
+ L P++ +LR E + E LR P + L
Sbjct: 253 MFHLLLSRPELAERLRSE------------------PEIRPRAIDELLRWIPHRNAVGLS 294
Query: 388 RISVKKYKLPNTDLTLD-----VGTKISIPTFAIHYDPEYYPDPEKFDPERFSPENIESR 442
RI++ D+ + G + + A + DPE +PDP++ D ER
Sbjct: 295 RIAL-------EDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDRIDFER------SPN 341
Query: 443 PHYTYLPFGDGPRNCIG 459
PH + FG GP C G
Sbjct: 342 PH---VSFGFGPHYCPG 355
>1gwi_A CYP154C1, cytochrome P450 154C1; oxidoreductase, macrolide
antibiotics, 12- and 14- carbon macrolactone
monooxygenase, heme; HET: HEM; 1.92A {Streptomyces
coelicolor} SCOP: a.104.1.1
Length = 411
Score = 54.5 bits (132), Expect = 3e-08
Identities = 65/401 (16%), Positives = 126/401 (31%), Gaps = 99/401 (24%)
Query: 78 LPYGGLYHLMT----PKLMVTDPELYKYILIKDFDHFVDRGIGESDAKRDPIEGHLFGSK 133
LP G +T K ++TDP L K I + + +
Sbjct: 37 LPGGVPVWAVTHHAEAKALLTDPRLVKDINVWGAWRRGEIPADWPLIGLANPGRSMLTVD 96
Query: 134 GEYWKRLRNKLSPTFTSGKIKYMFPLIKKCSDQLITTIRKQIGESKQMSLEVKDYCARYT 193
G +RLR ++ T ++++M I + +D+L+ + G + L +
Sbjct: 97 GAEHRRLRTLVAQALTVRRVEHMRGRITELTDRLLDELPADGGV---VDL-KAAFAYPLP 152
Query: 194 TDVIGSTAFGIEINSLENPDS---EFRQVSLLVMKPSV-LQMLKAVLSELIPLIKYLNLK 249
V+ + GI ++ + + + + A L+EL
Sbjct: 153 MYVV-ADLMGI-------EEARLPRLKVLFEKFFSTQTPPEEVVATLTELA--------- 195
Query: 250 IFDPRISQFFSNLVKTNLSYREKNNIKR----DDFLNIMMQLQIAQRGKTLSPDDVEMTD 305
++ V KR DD + + I + +TD
Sbjct: 196 -------SIMTDTVAA----------KRAAPGDDLTSAL----IQAS-----ENGDHLTD 229
Query: 306 DVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHK 365
I + + G+ET+ S++ + L+ +P+ ++ +
Sbjct: 230 AEIVSTLQLMVAAGHETTISLIVNAVVNLSTHPEQRALVLSG------------------ 271
Query: 366 MSYLDKVTKEALRMYPSLPQL-DRISVKKYKLPNTDLTLD-----VGTKISIPTFAIHYD 419
+ V +E LR + R + D+ + G + + A+ D
Sbjct: 272 EAEWSAVVEETLRFSTPTSHVLIRFAA-------EDVPVGDRVIPAGDALIVSYGALGRD 324
Query: 420 PE-YYPDPEKFDPERFSPENIESRPHYTYLPFGDGPRNCIG 459
+ P ++FD R S H + FG GP C G
Sbjct: 325 ERAHGPTADRFDLTRTSG-----NRH---ISFGHGPHVCPG 357
>3b4x_A 367AA long hypothetical cytochrome P450; HEM protein, heme, iron,
metal-binding, monooxygenase, oxidoreductase; HET: HEM;
1.94A {Sulfolobus tokodaii} PDB: 1ue8_A*
Length = 367
Score = 50.3 bits (121), Expect = 7e-07
Identities = 33/211 (15%), Positives = 73/211 (34%), Gaps = 49/211 (23%)
Query: 279 DFLNIMMQLQIAQRGKTLSPD------DVEMTDDVITAQSFVFFFGGYETSSSVLTFCLY 332
+ ++ + + R D + +++ + G ET+++++ +
Sbjct: 166 ELISFSKKE-LDSRKGKEIVDLTGKIANSNLSELEKEGYFILLMIAGNETTTNLIGNAIE 224
Query: 333 ELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSYLDKVTKEALRMYPSLPQLDRISVK 392
+ +R++ G L +EALR P + + R++ +
Sbjct: 225 DFTLYNSWD-YVREK--------GALK------------AVEEALRFSPPVMRTIRVTKE 263
Query: 393 KYKLPNTDLTLD-----VGTKISIPTFAIHYDPEYYPDPEKFDPERFSPENIESRPHYTY 447
+ + G + + + + D E + DP+ F P+R PH
Sbjct: 264 -------KVKIRDQVIDEGELVRVWIASANRDEEVFKDPDSFIPDR------TPNPH--- 307
Query: 448 LPFGDGPRNCIGMRFGTIQFKIGLAQLISNF 478
L FG G C+G ++ +I L + F
Sbjct: 308 LSFGSGIHLCLGAPLARLEARIALEEFAKKF 338
>3uo9_A Glutaminase kidney isoform, mitochondrial; hydrolase-hydrolase
inhibitor complex; HET: 04A; 2.30A {Homo sapiens} PDB:
3unw_A* 3ss3_A 3ss4_A 3ss5_A*
Length = 534
Score = 32.8 bits (74), Expect = 0.30
Identities = 17/76 (22%), Positives = 31/76 (40%), Gaps = 4/76 (5%)
Query: 236 LSELIPLIKYLNLKIFDPRISQFFSNLVKTNLSYREKNNIKRDDFLNIMMQ----LQIAQ 291
+ + I +K L+ DPR+ + L T + + + +D F + L A
Sbjct: 86 VHKFITALKSTGLRTSDPRLKECMDMLRLTLQTTSDGVMLDKDLFKKCVQSNIVLLTQAF 145
Query: 292 RGKTLSPDDVEMTDDV 307
R K + PD + T +
Sbjct: 146 RRKFVIPDFMSFTSHI 161
>1qzv_F Plant photosystem I: subunit PSAF; photosynthesis,plant
photosynthetic reaction center, peripheral antenna; HET:
CL1 PQN; 4.44A {Pisum sativum} SCOP: i.5.1.1
Length = 154
Score = 30.7 bits (68), Expect = 0.62
Identities = 11/44 (25%), Positives = 16/44 (36%), Gaps = 19/44 (43%)
Query: 374 KEALRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKISIPTFAIH 417
K+AL+ +L S+K Y + S P AI
Sbjct: 19 KQALK------KLQA-SLKLYA-DD-----------SAPALAIK 43
Score = 29.9 bits (66), Expect = 0.99
Identities = 9/50 (18%), Positives = 17/50 (34%), Gaps = 27/50 (54%)
Query: 345 RQEIMATKKKEGELTYEICHKMSYLDKVTKEALRMY-P-SLPQLDRISVK 392
+Q + KK + +L++Y S P L ++K
Sbjct: 19 KQAL---KKLQA-------------------SLKLYADDSAPAL---AIK 43
Score = 27.2 bits (59), Expect = 8.0
Identities = 7/29 (24%), Positives = 10/29 (34%), Gaps = 11/29 (37%)
Query: 271 EKNNIKRDDFLNIMMQLQIAQRGKTLSPD 299
EK +K+ LQ K + D
Sbjct: 18 EKQALKK---------LQ--ASLKLYADD 35
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding,
tRNA methyltransferase, S-adenosyl-L-methionine, iron,
4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi}
PDB: 2vs1_A*
Length = 425
Score = 31.0 bits (71), Expect = 0.92
Identities = 15/97 (15%), Positives = 30/97 (30%), Gaps = 37/97 (38%)
Query: 26 KSIFNYRYWKNKNVFYFSPTFPFGNYGAGFLSRITFHQM----HC----EFYNKIK---- 73
IF +R N+ G GF R + ++ C + +
Sbjct: 122 PKIFGHR---NRI------DLAITKDGIGFRERGKWWKIVDIDECPVFGKTSREAIERLK 172
Query: 74 ----------YDLKLPYGGLYHLM------TPKLMVT 94
+++K G L +++ T ++MV
Sbjct: 173 EFIEEEKISVWNIKKDEGFLRYMVLREGKFTEEVMVN 209
>3u31_A SIR2A, transcriptional regulatory protein SIR2 homologue;
Zn-binding domain, rossmann fold domain; HET: MYK NAD;
2.20A {Plasmodium falciparum} PDB: 3u3d_A* 3jwp_A*
Length = 290
Score = 28.4 bits (64), Expect = 5.0
Identities = 11/39 (28%), Positives = 14/39 (35%), Gaps = 13/39 (33%)
Query: 409 IS----IPTF--AI-----HYDPEYYPDPEKF--DPERF 434
S IP+F + YDP Y F PE+
Sbjct: 56 TSAESNIPSFRGSSNSIWSKYDPRIYGTIWGFWKYPEKI 94
>3dva_I Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase...; oxidoreductase, multienzyme complex;
HET: TPW; 2.35A {Bacillus stearothermophilus} PDB:
3dv0_I* 3duf_I* 1b5s_A 1lab_A 1lac_A 1w3d_A
Length = 428
Score = 28.7 bits (65), Expect = 5.3
Identities = 16/58 (27%), Positives = 26/58 (44%), Gaps = 11/58 (18%)
Query: 343 KLRQEIMATKKKEG-ELTYEICHKMSYLDKVTKEALRMYPSL-----PQLDRISVKKY 394
R++ A ++G +LT+ + Y+ K ALR YP L + + I K Y
Sbjct: 237 AHRKKFKAIAAEKGIKLTF-----LPYVVKALVSALREYPVLNTSIDDETEEIIQKHY 289
>1w99_A Pesticidial crystal protein CRY4BA; membrane pore, BIO-insecticide,
dipteran specificity, conformational change; 1.75A
{Bacillus thuringiensis serovarisraelensis}
Length = 558
Score = 28.3 bits (62), Expect = 6.9
Identities = 22/130 (16%), Positives = 45/130 (34%), Gaps = 9/130 (6%)
Query: 368 YLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPEYYPDPE 427
+ + L + + I+ YK T LD+ + FA YDP YP +
Sbjct: 140 HSITWYNKGLDVLRNKSNGQWITFNDYKREMTIQVLDI-----LALFA-SYDPRRYPADK 193
Query: 428 KFDPERFSPENIESRPHYTYLPFGDGPRNCIGMRFGTIQFKIGLAQLISNFEFSIDSANA 487
+ + E +R YT L ++ + + + L + +F ++
Sbjct: 194 IDNTKLSKTEF--TREIYTALVESPSSKSIAALEAALTR-DVHLFTWLKRVDFWTNTIYQ 250
Query: 488 TFEYLKGSIL 497
+L + +
Sbjct: 251 DLRFLSANKI 260
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.323 0.140 0.415
Gapped
Lambda K H
0.267 0.0762 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 7,787,613
Number of extensions: 483193
Number of successful extensions: 1249
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1058
Number of HSP's successfully gapped: 139
Length of query: 500
Length of database: 6,701,793
Length adjustment: 98
Effective length of query: 402
Effective length of database: 3,965,535
Effective search space: 1594145070
Effective search space used: 1594145070
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 59 (26.4 bits)