BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy2447
(448 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1W0E|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0F|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0G|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|2J0D|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2J0D|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2V0M|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|C Chain C, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|D Chain D, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|3NXU|A Chain A, Crystal Structure Of Human Cytochrome P4503a4 Bound To An
Inhibitor Ritonavir
pdb|3NXU|B Chain B, Crystal Structure Of Human Cytochrome P4503a4 Bound To An
Inhibitor Ritonavir
Length = 485
Score = 242 bits (617), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 141/377 (37%), Positives = 222/377 (58%), Gaps = 18/377 (4%)
Query: 75 PKLMVTDPELYKYILIKD-FDHFVDR-GMGELDAKRDPIAGHLFLSKGEYWKRLRNKLSP 132
P L +TDP++ K +L+K+ + F +R G + + I+ +++ E WKRLR+ LSP
Sbjct: 58 PVLAITDPDMIKTVLVKECYSVFTNRRPFGPVGFMKSAIS----IAEDEEWKRLRSLLSP 113
Query: 133 TFTSGKIKYMFPLIKKCSDQLITTIRKQIGESKQMSLEVKDYCARYTTDVIGTTAFGIEI 192
TFTSGK+K M P+I + D L+ +R++ K ++L KD Y+ DVI +T+FG+ I
Sbjct: 114 TFTSGKLKEMVPIIAQYGDVLVRNLRREAETGKPVTL--KDVFGAYSMDVITSTSFGVNI 171
Query: 193 NSLENPDSEFRQVSLLVMKPSVLQ---MLKAVLSELIPLIKYLNLKIFDPRISQFFSNLV 249
+SL NP F + + +++ L + V LIP+++ LN+ +F ++ F V
Sbjct: 172 DSLNNPQDPFVENTKKLLRFDFLDPFFLSITVFPFLIPILEVLNICVFPREVTNFLRKSV 231
Query: 250 KTNLSYR-EKNNIKRDDFLNIMMQLQIAQRGKTLSPDDVEMTDDVITAQSFVFFFGGYET 308
K R E R DFL +M+ Q ++ ++ ++D + AQS +F F GYET
Sbjct: 232 KRMKESRLEDTQKHRVDFLQLMIDSQNSKETESHK----ALSDLELVAQSIIFIFAGYET 287
Query: 309 SSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSYLDKVTKEALRMYPS 368
+SSVL+F +YELA +PD+Q KL++EI A + TY+ +M YLD V E LR++P
Sbjct: 288 TSSVLSFIMYELATHPDVQQKLQEEIDAVLPNKAPPTYDTVLQMEYLDMVVNETLRLFPI 347
Query: 369 LPQLDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPEYYPDPEKFDPERFSPENIESR 428
+L+R+ K ++ + + G + IP++A+H DP+Y+ +PEKF PERFS +N ++
Sbjct: 348 AMRLERVCKKDVEI--NGMFIPKGVVVMIPSYALHRDPKYWTEPEKFLPERFSKKNKDNI 405
Query: 429 PHYTYLPFGDGPRNCIG 445
Y Y PFG GPRNCIG
Sbjct: 406 DPYIYTPFGSGPRNCIG 422
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 38/69 (55%), Gaps = 7/69 (10%)
Query: 5 VKDYCARYTTDVIGSTAFGIEINSLENPDSEF-----RQVSLLFMKPSVLQMMKAVLSEL 59
+KD Y+ DVI ST+FG+ I+SL NP F + + F+ P L + V L
Sbjct: 150 LKDVFGAYSMDVITSTSFGVNIDSLNNPQDPFVENTKKLLRFDFLDPFFLSI--TVFPFL 207
Query: 60 IPVIKYLNL 68
IP+++ LN+
Sbjct: 208 IPILEVLNI 216
>pdb|3UA1|A Chain A, Crystal Structure Of The Cytochrome
P4503a4-Bromoergocryptine Complex
pdb|3TJS|A Chain A, Crystal Structure Of The Complex Between Human Cytochrome
P450 3a4 And Desthiazolylmethyloxycarbonyl Ritonavir
Length = 487
Score = 242 bits (617), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 141/377 (37%), Positives = 222/377 (58%), Gaps = 18/377 (4%)
Query: 75 PKLMVTDPELYKYILIKD-FDHFVDR-GMGELDAKRDPIAGHLFLSKGEYWKRLRNKLSP 132
P L +TDP++ K +L+K+ + F +R G + + I+ +++ E WKRLR+ LSP
Sbjct: 60 PVLAITDPDMIKTVLVKECYSVFTNRRPFGPVGFMKSAIS----IAEDEEWKRLRSLLSP 115
Query: 133 TFTSGKIKYMFPLIKKCSDQLITTIRKQIGESKQMSLEVKDYCARYTTDVIGTTAFGIEI 192
TFTSGK+K M P+I + D L+ +R++ K ++L KD Y+ DVI +T+FG+ I
Sbjct: 116 TFTSGKLKEMVPIIAQYGDVLVRNLRREAETGKPVTL--KDVFGAYSMDVITSTSFGVNI 173
Query: 193 NSLENPDSEFRQVSLLVMKPSVLQ---MLKAVLSELIPLIKYLNLKIFDPRISQFFSNLV 249
+SL NP F + + +++ L + V LIP+++ LN+ +F ++ F V
Sbjct: 174 DSLNNPQDPFVENTKKLLRFDFLDPFFLSITVFPFLIPILEVLNICVFPREVTNFLRKSV 233
Query: 250 KTNLSYR-EKNNIKRDDFLNIMMQLQIAQRGKTLSPDDVEMTDDVITAQSFVFFFGGYET 308
K R E R DFL +M+ Q ++ ++ ++D + AQS +F F GYET
Sbjct: 234 KRMKESRLEDTQKHRVDFLQLMIDSQNSKETESHK----ALSDLELVAQSIIFIFAGYET 289
Query: 309 SSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSYLDKVTKEALRMYPS 368
+SSVL+F +YELA +PD+Q KL++EI A + TY+ +M YLD V E LR++P
Sbjct: 290 TSSVLSFIMYELATHPDVQQKLQEEIDAVLPNKAPPTYDTVLQMEYLDMVVNETLRLFPI 349
Query: 369 LPQLDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPEYYPDPEKFDPERFSPENIESR 428
+L+R+ K ++ + + G + IP++A+H DP+Y+ +PEKF PERFS +N ++
Sbjct: 350 AMRLERVCKKDVEI--NGMFIPKGVVVMIPSYALHRDPKYWTEPEKFLPERFSKKNKDNI 407
Query: 429 PHYTYLPFGDGPRNCIG 445
Y Y PFG GPRNCIG
Sbjct: 408 DPYIYTPFGSGPRNCIG 424
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 38/69 (55%), Gaps = 7/69 (10%)
Query: 5 VKDYCARYTTDVIGSTAFGIEINSLENPDSEF-----RQVSLLFMKPSVLQMMKAVLSEL 59
+KD Y+ DVI ST+FG+ I+SL NP F + + F+ P L + V L
Sbjct: 152 LKDVFGAYSMDVITSTSFGVNIDSLNNPQDPFVENTKKLLRFDFLDPFFLSI--TVFPFL 209
Query: 60 IPVIKYLNL 68
IP+++ LN+
Sbjct: 210 IPILEVLNI 218
>pdb|1TQN|A Chain A, Crystal Structure Of Human Microsomal P450 3a4
Length = 486
Score = 242 bits (617), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 141/377 (37%), Positives = 222/377 (58%), Gaps = 18/377 (4%)
Query: 75 PKLMVTDPELYKYILIKD-FDHFVDR-GMGELDAKRDPIAGHLFLSKGEYWKRLRNKLSP 132
P L +TDP++ K +L+K+ + F +R G + + I+ +++ E WKRLR+ LSP
Sbjct: 59 PVLAITDPDMIKTVLVKECYSVFTNRRPFGPVGFMKSAIS----IAEDEEWKRLRSLLSP 114
Query: 133 TFTSGKIKYMFPLIKKCSDQLITTIRKQIGESKQMSLEVKDYCARYTTDVIGTTAFGIEI 192
TFTSGK+K M P+I + D L+ +R++ K ++L KD Y+ DVI +T+FG+ I
Sbjct: 115 TFTSGKLKEMVPIIAQYGDVLVRNLRREAETGKPVTL--KDVFGAYSMDVITSTSFGVNI 172
Query: 193 NSLENPDSEFRQVSLLVMKPSVLQ---MLKAVLSELIPLIKYLNLKIFDPRISQFFSNLV 249
+SL NP F + + +++ L + V LIP+++ LN+ +F ++ F V
Sbjct: 173 DSLNNPQDPFVENTKKLLRFDFLDPFFLSITVFPFLIPILEVLNICVFPREVTNFLRKSV 232
Query: 250 KTNLSYR-EKNNIKRDDFLNIMMQLQIAQRGKTLSPDDVEMTDDVITAQSFVFFFGGYET 308
K R E R DFL +M+ Q ++ ++ ++D + AQS +F F GYET
Sbjct: 233 KRMKESRLEDTQKHRVDFLQLMIDSQNSKETESHK----ALSDLELVAQSIIFIFAGYET 288
Query: 309 SSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSYLDKVTKEALRMYPS 368
+SSVL+F +YELA +PD+Q KL++EI A + TY+ +M YLD V E LR++P
Sbjct: 289 TSSVLSFIMYELATHPDVQQKLQEEIDAVLPNKAPPTYDTVLQMEYLDMVVNETLRLFPI 348
Query: 369 LPQLDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPEYYPDPEKFDPERFSPENIESR 428
+L+R+ K ++ + + G + IP++A+H DP+Y+ +PEKF PERFS +N ++
Sbjct: 349 AMRLERVCKKDVEI--NGMFIPKGVVVMIPSYALHRDPKYWTEPEKFLPERFSKKNKDNI 406
Query: 429 PHYTYLPFGDGPRNCIG 445
Y Y PFG GPRNCIG
Sbjct: 407 DPYIYTPFGSGPRNCIG 423
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 38/69 (55%), Gaps = 7/69 (10%)
Query: 5 VKDYCARYTTDVIGSTAFGIEINSLENPDSEF-----RQVSLLFMKPSVLQMMKAVLSEL 59
+KD Y+ DVI ST+FG+ I+SL NP F + + F+ P L + V L
Sbjct: 151 LKDVFGAYSMDVITSTSFGVNIDSLNNPQDPFVENTKKLLRFDFLDPFFLSI--TVFPFL 208
Query: 60 IPVIKYLNL 68
IP+++ LN+
Sbjct: 209 IPILEVLNI 217
>pdb|2Q9F|A Chain A, Crystal Structure Of Human Cytochrome P450 46a1 In Complex
With Cholesterol-3-Sulphate
pdb|2Q9G|A Chain A, Crystal Structure Of Human Cytochrome P450 46a1
pdb|3MDM|A Chain A, Thioperamide Complex Of Cytochrome P450 46a1
pdb|3MDR|A Chain A, Tranylcypromine Complex Of Cytochrome P450 46a1
pdb|3MDR|B Chain B, Tranylcypromine Complex Of Cytochrome P450 46a1
pdb|3MDT|A Chain A, Voriconazole Complex Of Cytochrome P450 46a1
pdb|3MDT|B Chain B, Voriconazole Complex Of Cytochrome P450 46a1
pdb|3MDV|A Chain A, Clotrimazole Complex Of Cytochrome P450 46a1
pdb|3MDV|B Chain B, Clotrimazole Complex Of Cytochrome P450 46a1
pdb|4ENH|A Chain A, Crystal Structure Of Human Cytochrome P450 Cyp46a1 With
Fluvoxamine Bound
pdb|4FIA|A Chain A, Crystal Structure Of Human Cyp46a1 P450 With Bicalutamide
Bound
Length = 456
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 95/380 (25%), Positives = 176/380 (46%), Gaps = 34/380 (8%)
Query: 77 LMVTDPELYKYILIK---DFDHFVDRGMGELDAKRDPIAGHLFLSKGEY--WKRLRNKLS 131
++VT PE K L+ + D + R + + +R + G +S+ Y W + R +
Sbjct: 37 VIVTSPESVKKFLMSTKYNKDSKMYRALQTVFGER--LFGQGLVSECNYERWHKQRRVID 94
Query: 132 PTFTSGKIKYMFPLIKKCSDQLITTIRKQIGESKQMSLEVKDYCARYTTDVIGTTAFGIE 191
F+ + + + ++QL+ + + Q + ++D D++ AFG+E
Sbjct: 95 LAFSRSSLVSLMETFNEKAEQLVEILEAKA--DGQTPVSMQDMLTYTAMDILAKAAFGME 152
Query: 192 INSLENPDSEFRQVSLLVMKPSVLQMLKAVLSELIPLIKYLNLK---IFDPRISQFFSNL 248
+ L Q +V ML+ + + L K+L K + + R S F
Sbjct: 153 TSMLLGAQKPLSQ--------AVKLMLEGITASRNTLAKFLPGKRKQLREVRESIRFLRQ 204
Query: 249 VKTNLSYREKNNIKRDDFL--NIMMQLQIAQRGKTLSPDDVEMTDDVITAQSFVFFFGGY 306
V + R + +KR + + +I+ Q+ A+ G + DD + D+ +T FF G+
Sbjct: 205 VGRDWVQRRREALKRGEEVPADILTQILKAEEG---AQDDEGLLDNFVT-----FFIAGH 256
Query: 307 ETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSYLDKVTKEALRMY 366
ETS++ L F + EL+R P+I ++L+ E+ + L +E ++ YL +V KE+LR+Y
Sbjct: 257 ETSANHLAFTVMELSRQPEIVARLQAEVDEVIGSKRYLDFEDLGRLQYLSQVLKESLRLY 316
Query: 367 PSLPQLDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPEYYPDPEKFDPERFSPENIE 426
P P + + + + + T + T+ + Y+ DP F+P+RF P
Sbjct: 317 P--PAWGTFRLLEEETLIDGVRVPGNTPLLFSTYVMGRMDTYFEDPLTFNPDRFGPGA-- 372
Query: 427 SRPHYTYLPFGDGPRNCIGK 446
+P +TY PF G R+CIG+
Sbjct: 373 PKPRFTYFPFSLGHRSCIGQ 392
>pdb|3CBD|A Chain A, Directed Evolution Of Cytochrome P450 Bm3, To Octane
Monoxygenase 139-3
pdb|3CBD|B Chain B, Directed Evolution Of Cytochrome P450 Bm3, To Octane
Monoxygenase 139-3
Length = 455
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 94/351 (26%), Positives = 163/351 (46%), Gaps = 38/351 (10%)
Query: 108 RDPIAGHLFLS--KGEYWKRLRNKLSPTFTSGKIKYMFPLIKKCSDQLITTIRKQIGESK 165
RD LF S + WK+ N L P+F+ +K ++ + QL+ + +
Sbjct: 79 RDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADE- 137
Query: 166 QMSLEVKDYCARYTTDVIGTTAFGIEINSLENPDSEFRQVSLLVMKPSVLQMLKAVLSEL 225
+EV + R T D IG F NS +R P ++ M++A L E+
Sbjct: 138 --YIEVPEDMTRLTLDTIGLCGFNYRFNSF------YRDQP----HPFIISMIRA-LDEV 184
Query: 226 IPLIKYLNLK--IFDPRISQF------FSNLVKTNLSYREKNNIKRDDFLNIMMQLQIAQ 277
+ ++ N +D QF ++LV ++ R+ + + DD L M+ + +
Sbjct: 185 MNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTQMLNGKDPE 244
Query: 278 RGKTLSPDDVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMAT 337
G+ L D I+ Q F G+ET+S +L+F LY L +NP + K+ +E AT
Sbjct: 245 TGEPLD-------DGNISYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKVAEE--AT 295
Query: 338 KKKEGEL-TYEICHKMSYLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKIS 396
+ + +Y+ ++ Y+ V EALR++P+ P + K+ + + L+ G ++
Sbjct: 296 RVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFS-LYAKEDTVLGGEYPLEKGDEVM 354
Query: 397 IPTFAIHYDPEYYPDP-EKFDPERFSPENIESRPHYTYLPFGDGPRNCIGK 446
+ +H D + D E+F PERF EN + P + + PFG+G R CIG+
Sbjct: 355 VLIPQLHRDKTIWGDDVEEFRPERF--ENPSAIPQHAFKPFGNGQRACIGQ 403
>pdb|3QI8|B Chain B, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1)
pdb|3QI8|A Chain A, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1)
Length = 472
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 90/333 (27%), Positives = 153/333 (45%), Gaps = 34/333 (10%)
Query: 123 WKRLRNKLSPTFTSGKIKYMFPLIKKCSDQLITTIRKQIGESKQMSLEVKDYCARYTTDV 182
WK+ RN L P + +K ++ + QL+ + + +EV + R T D
Sbjct: 97 WKKARNILLPRLSQQAMKGYHAMMVDIAVQLVQKWERLNSDE---HIEVPEDMTRLTLDT 153
Query: 183 IGTTAFGIEINSLENPDSEFRQVSLLVMKPSVLQMLKAVLSELIPLIKYLNLK--IFDPR 240
IG F INS +R P + M++A L E++ ++ N +D
Sbjct: 154 IGLCGFNYRINSF------YRDQP----HPFITSMVRA-LDEVMNKLQRANPDDPAYDEN 202
Query: 241 ISQF------FSNLVKTNLSYREKNNIKRDDFLNIMMQLQIAQRGKTLSPDDVEMTDDVI 294
QF ++LV ++ R+ + + DD L M+ + + G+ L D+ I
Sbjct: 203 KRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLHGKDPETGEPLD-------DENI 255
Query: 295 TAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSY 354
Q F G+ET+S +LTF LY L +NP + K +E A + +Y+ ++ Y
Sbjct: 256 RYQIITFLIAGHETTSGLLTFALYFLVKNPHVLQKAAEE-AARVLVDPVPSYKQVKQLKY 314
Query: 355 LDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPEYYPDP-E 413
+ V EALR++P+ P + K+ + + L+ G ++ + +H D + D E
Sbjct: 315 VGMVLNEALRIWPTAPAFS-LYAKEDTMLGGEYPLEKGDELMVLIPQLHRDKTVWGDDVE 373
Query: 414 KFDPERFSPENIESRPHYTYLPFGDGPRNCIGK 446
+F PERF EN + P + + PFG+G R CIG+
Sbjct: 374 EFRPERF--ENPSAIPQHAFKPFGNGQRACIGQ 404
>pdb|2NNB|A Chain A, The Q403k Mutnat Heme Domain Of Flavocytochrome P450 Bm3
pdb|2NNB|B Chain B, The Q403k Mutnat Heme Domain Of Flavocytochrome P450 Bm3
Length = 471
Score = 105 bits (261), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 94/350 (26%), Positives = 158/350 (45%), Gaps = 36/350 (10%)
Query: 108 RDPIAGHLFLS--KGEYWKRLRNKLSPTFTSGKIKYMFPLIKKCSDQLITTIRKQIGESK 165
RD LF S + WK+ N L P+F+ +K ++ + QL+ + +
Sbjct: 79 RDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADE- 137
Query: 166 QMSLEVKDYCARYTTDVIGTTAFGIEINSLENPDSEFRQVSLLVMKPSVLQMLKAVLSEL 225
+EV + R T D IG F NS +R P + M++A L E
Sbjct: 138 --HIEVPEDMTRLTLDTIGLCGFNYRFNSF------YRDQP----HPFITSMVRA-LDEA 184
Query: 226 IPLIKYLNLK--IFDPRISQF------FSNLVKTNLSYREKNNIKRDDFLNIMMQLQIAQ 277
+ ++ N +D QF ++LV ++ R+ + + DD L M+ + +
Sbjct: 185 MNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPE 244
Query: 278 RGKTLSPDDVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMAT 337
G+ L D+ I Q F G+ET+S +L+F LY L +NP + K +E A
Sbjct: 245 TGEPLD-------DENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEE-AAR 296
Query: 338 KKKEGELTYEICHKMSYLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKISI 397
+ +Y+ ++ Y+ V EALR++P+ P + K+ + + L+ G ++ +
Sbjct: 297 VLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFS-LYAKEDTVLGGEYPLEKGDELMV 355
Query: 398 PTFAIHYDPEYYPDP-EKFDPERFSPENIESRPHYTYLPFGDGPRNCIGK 446
+H D + D E+F PERF EN + P + + PFG+G R CIGK
Sbjct: 356 LIPQLHRDKTIWGDDVEEFRPERF--ENPSAIPQHAFKPFGNGQRACIGK 403
>pdb|1ZOA|A Chain A, Crystal Structure Of A328v Mutant Of The Heme Domain Of
P450bm-3 With N-Palmitoylglycine
pdb|1ZOA|B Chain B, Crystal Structure Of A328v Mutant Of The Heme Domain Of
P450bm-3 With N-Palmitoylglycine
Length = 473
Score = 105 bits (261), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 93/350 (26%), Positives = 159/350 (45%), Gaps = 36/350 (10%)
Query: 108 RDPIAGHLFLS--KGEYWKRLRNKLSPTFTSGKIKYMFPLIKKCSDQLITTIRKQIGESK 165
RD LF S + WK+ N L P+F+ +K ++ + QL+ + +
Sbjct: 82 RDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADE- 140
Query: 166 QMSLEVKDYCARYTTDVIGTTAFGIEINSLENPDSEFRQVSLLVMKPSVLQMLKAVLSEL 225
+EV + R T D IG F NS +R P + M++A L E
Sbjct: 141 --HIEVPEDMTRLTLDTIGLCGFNYRFNSF------YRDQP----HPFITSMVRA-LDEA 187
Query: 226 IPLIKYLNLK--IFDPRISQF------FSNLVKTNLSYREKNNIKRDDFLNIMMQLQIAQ 277
+ ++ N +D QF ++LV ++ R+ + + DD L M+ + +
Sbjct: 188 MNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPE 247
Query: 278 RGKTLSPDDVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMAT 337
G+ L D+ I Q F G+ET+S +L+F LY L +NP + K +E A
Sbjct: 248 TGEPLD-------DENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEE-AAR 299
Query: 338 KKKEGELTYEICHKMSYLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKISI 397
+ +Y+ ++ Y+ V EALR++P++P + K+ + + L+ G ++ +
Sbjct: 300 VLVDPVPSYKQVKQLKYVGMVLNEALRLWPTVPAFS-LYAKEDTVLGGEYPLEKGDELMV 358
Query: 398 PTFAIHYDPEYYPDP-EKFDPERFSPENIESRPHYTYLPFGDGPRNCIGK 446
+H D + D E+F PERF EN + P + + PFG+G R CIG+
Sbjct: 359 LIPQLHRDKTIWGDDVEEFRPERF--ENPSAIPQHAFKPFGNGQRACIGQ 406
>pdb|3PSX|A Chain A, Crystal Structure Of The Kt2 Mutant Of Cytochrome P450 Bm3
pdb|3PSX|B Chain B, Crystal Structure Of The Kt2 Mutant Of Cytochrome P450 Bm3
Length = 487
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 94/350 (26%), Positives = 158/350 (45%), Gaps = 36/350 (10%)
Query: 108 RDPIAGHLFLS--KGEYWKRLRNKLSPTFTSGKIKYMFPLIKKCSDQLITTIRKQIGESK 165
RD LF S + WK+ N L P+F+ +K ++ + QL+ + +
Sbjct: 85 RDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADE- 143
Query: 166 QMSLEVKDYCARYTTDVIGTTAFGIEINSLENPDSEFRQVSLLVMKPSVLQMLKAVLSEL 225
+EV + R T D IG F NS +R P + M++A L E
Sbjct: 144 --HIEVPEDMTRLTLDTIGLCGFNYRFNSF------YRDQP----HPFITSMVRA-LDEA 190
Query: 226 IPLIKYLNLK--IFDPRISQF------FSNLVKTNLSYREKNNIKRDDFLNIMMQLQIAQ 277
+ ++ N +D QF ++LV ++ R+ + + DD L M+ + +
Sbjct: 191 MNKLQRTNPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLHGKDPE 250
Query: 278 RGKTLSPDDVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMAT 337
G+ L D+ I Q F G+ET+S +L+F LY L +NP + K +E A
Sbjct: 251 TGEPLD-------DENIRYQIVTFLIAGHETTSGLLSFTLYFLVKNPHVLQKAAEE-AAR 302
Query: 338 KKKEGELTYEICHKMSYLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKISI 397
+ +Y+ ++ Y+ V EALR++P+ P + K+ + + L+ G +I +
Sbjct: 303 VLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFS-LYAKEDTVLGGEYPLEKGDEIMV 361
Query: 398 PTFAIHYDPEYYPDP-EKFDPERFSPENIESRPHYTYLPFGDGPRNCIGK 446
+H D + D E+F PERF EN + P + + PFG+G R CIG+
Sbjct: 362 LIPQLHRDKTIWGDDVEEFRPERF--ENPSAIPQHAFKPFGNGQRACIGQ 409
>pdb|2UWH|A Chain A, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|B Chain B, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|C Chain C, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|D Chain D, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|E Chain E, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|F Chain F, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
Length = 458
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 93/350 (26%), Positives = 158/350 (45%), Gaps = 36/350 (10%)
Query: 108 RDPIAGHLFLS--KGEYWKRLRNKLSPTFTSGKIKYMFPLIKKCSDQLITTIRKQIGESK 165
RD LF S + WK+ N L P+F+ +K ++ + QL+ + +
Sbjct: 79 RDFFGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADE- 137
Query: 166 QMSLEVKDYCARYTTDVIGTTAFGIEINSLENPDSEFRQVSLLVMKPSVLQMLKAVLSEL 225
+EV + R T D IG F NS +R P + M++A L E
Sbjct: 138 --HIEVPEDMTRLTLDTIGLCGFNYRFNSF------YRDQP----HPFITSMVRA-LDEA 184
Query: 226 IPLIKYLNLK--IFDPRISQF------FSNLVKTNLSYREKNNIKRDDFLNIMMQLQIAQ 277
+ ++ N +D QF ++LV ++ R+ + + DD L M+ + +
Sbjct: 185 MNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPE 244
Query: 278 RGKTLSPDDVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMAT 337
G+ L D+ I Q F G+ET+S +L+F LY L +NP + K +E A
Sbjct: 245 TGEPLD-------DENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEE-AAR 296
Query: 338 KKKEGELTYEICHKMSYLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKISI 397
+ +Y+ ++ Y+ V EALR++P+ P + K+ + + L+ G ++ +
Sbjct: 297 VLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFS-LYAKEDTVLGGEYPLEKGDELMV 355
Query: 398 PTFAIHYDPEYYPDP-EKFDPERFSPENIESRPHYTYLPFGDGPRNCIGK 446
+H D + D E+F PERF EN + P + + PFG+G R CIG+
Sbjct: 356 LIPQLHRDKTIWGDDVEEFRPERF--ENPSAIPQHAFKPFGNGQRACIGQ 403
>pdb|2BMH|A Chain A, Modeling Protein-Substrate Interactions In The Heme Domain
Of Cytochrome P450bm-3
pdb|2BMH|B Chain B, Modeling Protein-Substrate Interactions In The Heme Domain
Of Cytochrome P450bm-3
pdb|1BU7|A Chain A, Cryogenic Structure Of Cytochrome P450bm-3 Heme Domain
pdb|1BU7|B Chain B, Cryogenic Structure Of Cytochrome P450bm-3 Heme Domain
pdb|2J1M|A Chain A, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J1M|B Chain B, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J4S|A Chain A, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J4S|B Chain B, P450 Bm3 Heme Domain In Complex With Dmso
Length = 455
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 93/350 (26%), Positives = 158/350 (45%), Gaps = 36/350 (10%)
Query: 108 RDPIAGHLFLS--KGEYWKRLRNKLSPTFTSGKIKYMFPLIKKCSDQLITTIRKQIGESK 165
RD LF S + WK+ N L P+F+ +K ++ + QL+ + +
Sbjct: 79 RDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADE- 137
Query: 166 QMSLEVKDYCARYTTDVIGTTAFGIEINSLENPDSEFRQVSLLVMKPSVLQMLKAVLSEL 225
+EV + R T D IG F NS +R P + M++A L E
Sbjct: 138 --HIEVPEDMTRLTLDTIGLCGFNYRFNSF------YRDQP----HPFITSMVRA-LDEA 184
Query: 226 IPLIKYLNLK--IFDPRISQF------FSNLVKTNLSYREKNNIKRDDFLNIMMQLQIAQ 277
+ ++ N +D QF ++LV ++ R+ + + DD L M+ + +
Sbjct: 185 MNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPE 244
Query: 278 RGKTLSPDDVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMAT 337
G+ L D+ I Q F G+ET+S +L+F LY L +NP + K +E A
Sbjct: 245 TGEPLD-------DENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEE-AAR 296
Query: 338 KKKEGELTYEICHKMSYLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKISI 397
+ +Y+ ++ Y+ V EALR++P+ P + K+ + + L+ G ++ +
Sbjct: 297 VLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFS-LYAKEDTVLGGEYPLEKGDELMV 355
Query: 398 PTFAIHYDPEYYPDP-EKFDPERFSPENIESRPHYTYLPFGDGPRNCIGK 446
+H D + D E+F PERF EN + P + + PFG+G R CIG+
Sbjct: 356 LIPQLHRDKTIWGDDVEEFRPERF--ENPSAIPQHAFKPFGNGQRACIGQ 403
>pdb|1JPZ|A Chain A, Crystal Structure Of A Complex Of The Heme Domain Of
P450bm- 3 With N-Palmitoylglycine
pdb|1JPZ|B Chain B, Crystal Structure Of A Complex Of The Heme Domain Of
P450bm- 3 With N-Palmitoylglycine
pdb|1ZO9|A Chain A, Crystal Structure Of The Wild Type Heme Domain Of P450bm-3
With N- Palmitoylmethionine
pdb|1ZO9|B Chain B, Crystal Structure Of The Wild Type Heme Domain Of P450bm-3
With N- Palmitoylmethionine
Length = 473
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 93/350 (26%), Positives = 158/350 (45%), Gaps = 36/350 (10%)
Query: 108 RDPIAGHLFLS--KGEYWKRLRNKLSPTFTSGKIKYMFPLIKKCSDQLITTIRKQIGESK 165
RD LF S + WK+ N L P+F+ +K ++ + QL+ + +
Sbjct: 82 RDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADE- 140
Query: 166 QMSLEVKDYCARYTTDVIGTTAFGIEINSLENPDSEFRQVSLLVMKPSVLQMLKAVLSEL 225
+EV + R T D IG F NS +R P + M++A L E
Sbjct: 141 --HIEVPEDMTRLTLDTIGLCGFNYRFNSF------YRDQP----HPFITSMVRA-LDEA 187
Query: 226 IPLIKYLNLK--IFDPRISQF------FSNLVKTNLSYREKNNIKRDDFLNIMMQLQIAQ 277
+ ++ N +D QF ++LV ++ R+ + + DD L M+ + +
Sbjct: 188 MNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPE 247
Query: 278 RGKTLSPDDVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMAT 337
G+ L D+ I Q F G+ET+S +L+F LY L +NP + K +E A
Sbjct: 248 TGEPLD-------DENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEE-AAR 299
Query: 338 KKKEGELTYEICHKMSYLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKISI 397
+ +Y+ ++ Y+ V EALR++P+ P + K+ + + L+ G ++ +
Sbjct: 300 VLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFS-LYAKEDTVLGGEYPLEKGDELMV 358
Query: 398 PTFAIHYDPEYYPDP-EKFDPERFSPENIESRPHYTYLPFGDGPRNCIGK 446
+H D + D E+F PERF EN + P + + PFG+G R CIG+
Sbjct: 359 LIPQLHRDKTIWGDDVEEFRPERF--ENPSAIPQHAFKPFGNGQRACIGQ 406
>pdb|1BVY|A Chain A, Complex Of The Heme And Fmn-Binding Domains Of The
Cytochrome P450(Bm-3)
pdb|1BVY|B Chain B, Complex Of The Heme And Fmn-Binding Domains Of The
Cytochrome P450(Bm-3)
Length = 458
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 93/350 (26%), Positives = 158/350 (45%), Gaps = 36/350 (10%)
Query: 108 RDPIAGHLFLS--KGEYWKRLRNKLSPTFTSGKIKYMFPLIKKCSDQLITTIRKQIGESK 165
RD LF S + WK+ N L P+F+ +K ++ + QL+ + +
Sbjct: 79 RDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADE- 137
Query: 166 QMSLEVKDYCARYTTDVIGTTAFGIEINSLENPDSEFRQVSLLVMKPSVLQMLKAVLSEL 225
+EV + R T D IG F NS +R P + M++A L E
Sbjct: 138 --HIEVPEDMTRLTLDTIGLCGFNYRFNSF------YRDQP----HPFITSMVRA-LDEA 184
Query: 226 IPLIKYLNLK--IFDPRISQF------FSNLVKTNLSYREKNNIKRDDFLNIMMQLQIAQ 277
+ ++ N +D QF ++LV ++ R+ + + DD L M+ + +
Sbjct: 185 MNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPE 244
Query: 278 RGKTLSPDDVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMAT 337
G+ L D+ I Q F G+ET+S +L+F LY L +NP + K +E A
Sbjct: 245 TGEPLD-------DENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEE-AAR 296
Query: 338 KKKEGELTYEICHKMSYLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKISI 397
+ +Y+ ++ Y+ V EALR++P+ P + K+ + + L+ G ++ +
Sbjct: 297 VLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFS-LYAKEDTVLGGEYPLEKGDELMV 355
Query: 398 PTFAIHYDPEYYPDP-EKFDPERFSPENIESRPHYTYLPFGDGPRNCIGK 446
+H D + D E+F PERF EN + P + + PFG+G R CIG+
Sbjct: 356 LIPQLHRDKTIWGDDVEEFRPERF--ENPSAIPQHAFKPFGNGQRACIGQ 403
>pdb|2X7Y|A Chain A, P450 Bm3 F87a In Complex With Dmso
pdb|2X7Y|B Chain B, P450 Bm3 F87a In Complex With Dmso
pdb|2X80|A Chain A, P450 Bm3 F87a In Complex With Dmso
pdb|2X80|B Chain B, P450 Bm3 F87a In Complex With Dmso
Length = 455
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 88/333 (26%), Positives = 152/333 (45%), Gaps = 34/333 (10%)
Query: 123 WKRLRNKLSPTFTSGKIKYMFPLIKKCSDQLITTIRKQIGESKQMSLEVKDYCARYTTDV 182
WK+ N L P+F+ +K ++ + QL+ + + +EV + R T D
Sbjct: 96 WKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADE---HIEVPEDMTRLTLDT 152
Query: 183 IGTTAFGIEINSLENPDSEFRQVSLLVMKPSVLQMLKAVLSELIPLIKYLNLK--IFDPR 240
IG F NS +R P + M++A L E + ++ N +D
Sbjct: 153 IGLCGFNYRFNSF------YRDQP----HPFITSMVRA-LDEAMNKLQRANPDDPAYDEN 201
Query: 241 ISQF------FSNLVKTNLSYREKNNIKRDDFLNIMMQLQIAQRGKTLSPDDVEMTDDVI 294
QF ++LV ++ R+ + + DD L M+ + + G+ L D+ I
Sbjct: 202 KRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLD-------DENI 254
Query: 295 TAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSY 354
Q F G+ET+S +L+F LY L +NP + K +E A + +Y+ ++ Y
Sbjct: 255 RYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEE-AARVLVDPVPSYKQVKQLKY 313
Query: 355 LDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPEYYPDP-E 413
+ V EALR++P+ P + K+ + + L+ G ++ + +H D + D E
Sbjct: 314 VGMVLNEALRLWPTAPAFS-LYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVE 372
Query: 414 KFDPERFSPENIESRPHYTYLPFGDGPRNCIGK 446
+F PERF EN + P + + PFG+G R CIG+
Sbjct: 373 EFRPERF--ENPSAIPQHAFKPFGNGQRACIGQ 403
>pdb|3BEN|A Chain A, Structure Of N-(12-Imidazolyl-Dodecanoyl)-L-Leucine
Inhibitor Bound To The Heme Domain Of Cytochrome
P450-Bm3
pdb|3BEN|B Chain B, Structure Of N-(12-Imidazolyl-Dodecanoyl)-L-Leucine
Inhibitor Bound To The Heme Domain Of Cytochrome
P450-Bm3
Length = 470
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 93/350 (26%), Positives = 158/350 (45%), Gaps = 36/350 (10%)
Query: 108 RDPIAGHLFLS--KGEYWKRLRNKLSPTFTSGKIKYMFPLIKKCSDQLITTIRKQIGESK 165
RD LF S + WK+ N L P+F+ +K ++ + QL+ + +
Sbjct: 80 RDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADE- 138
Query: 166 QMSLEVKDYCARYTTDVIGTTAFGIEINSLENPDSEFRQVSLLVMKPSVLQMLKAVLSEL 225
+EV + R T D IG F NS +R P + M++A L E
Sbjct: 139 --HIEVPEDMTRLTLDTIGLCGFNYRFNSF------YRDQP----HPFITSMVRA-LDEA 185
Query: 226 IPLIKYLNLK--IFDPRISQF------FSNLVKTNLSYREKNNIKRDDFLNIMMQLQIAQ 277
+ ++ N +D QF ++LV ++ R+ + + DD L M+ + +
Sbjct: 186 MNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPE 245
Query: 278 RGKTLSPDDVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMAT 337
G+ L D+ I Q F G+ET+S +L+F LY L +NP + K +E A
Sbjct: 246 TGEPLD-------DENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEE-AAR 297
Query: 338 KKKEGELTYEICHKMSYLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKISI 397
+ +Y+ ++ Y+ V EALR++P+ P + K+ + + L+ G ++ +
Sbjct: 298 VLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFS-LYAKEDTVLGGEYPLEKGDELMV 356
Query: 398 PTFAIHYDPEYYPDP-EKFDPERFSPENIESRPHYTYLPFGDGPRNCIGK 446
+H D + D E+F PERF EN + P + + PFG+G R CIG+
Sbjct: 357 LIPQLHRDKTIWGDDVEEFRPERF--ENPSAIPQHAFKPFGNGQRACIGQ 404
>pdb|2IJ2|A Chain A, Atomic Structure Of The Heme Domain Of Flavocytochrome
P450- Bm3
pdb|2IJ2|B Chain B, Atomic Structure Of The Heme Domain Of Flavocytochrome
P450- Bm3
Length = 470
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 93/350 (26%), Positives = 158/350 (45%), Gaps = 36/350 (10%)
Query: 108 RDPIAGHLFLS--KGEYWKRLRNKLSPTFTSGKIKYMFPLIKKCSDQLITTIRKQIGESK 165
RD LF S + WK+ N L P+F+ +K ++ + QL+ + +
Sbjct: 79 RDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADE- 137
Query: 166 QMSLEVKDYCARYTTDVIGTTAFGIEINSLENPDSEFRQVSLLVMKPSVLQMLKAVLSEL 225
+EV + R T D IG F NS +R P + M++A L E
Sbjct: 138 --HIEVPEDMTRLTLDTIGLCGFNYRFNSF------YRDQP----HPFITSMVRA-LDEA 184
Query: 226 IPLIKYLNLK--IFDPRISQF------FSNLVKTNLSYREKNNIKRDDFLNIMMQLQIAQ 277
+ ++ N +D QF ++LV ++ R+ + + DD L M+ + +
Sbjct: 185 MNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPE 244
Query: 278 RGKTLSPDDVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMAT 337
G+ L D+ I Q F G+ET+S +L+F LY L +NP + K +E A
Sbjct: 245 TGEPLD-------DENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEE-AAR 296
Query: 338 KKKEGELTYEICHKMSYLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKISI 397
+ +Y+ ++ Y+ V EALR++P+ P + K+ + + L+ G ++ +
Sbjct: 297 VLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFS-LYAKEDTVLGGEYPLEKGDELMV 355
Query: 398 PTFAIHYDPEYYPDP-EKFDPERFSPENIESRPHYTYLPFGDGPRNCIGK 446
+H D + D E+F PERF EN + P + + PFG+G R CIG+
Sbjct: 356 LIPQLHRDKTIWGDDVEEFRPERF--ENPSAIPQHAFKPFGNGQRACIGQ 403
>pdb|3KX3|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX3|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 91/348 (26%), Positives = 156/348 (44%), Gaps = 42/348 (12%)
Query: 116 FLSKGEY--------WKRLRNKLSPTFTSGKIKYMFPLIKKCSDQLITTIRKQIGESKQM 167
F GE+ WK+ N L P+F+ +K ++ + QL+ + +
Sbjct: 81 FAGDGEFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADE--- 137
Query: 168 SLEVKDYCARYTTDVIGTTAFGIEINSLENPDSEFRQVSLLVMKPSVLQMLKAVLSELIP 227
+EV + R T D IG F NS +R P + M++A L E +
Sbjct: 138 HIEVPEDMTRLTLDTIGLCGFNYRFNSF------YRDQP----HPFITSMVRA-LDEAMN 186
Query: 228 LIKYLNLK--IFDPRISQF------FSNLVKTNLSYREKNNIKRDDFLNIMMQLQIAQRG 279
++ N +D QF ++LV ++ R+ + + DD L M+ + + G
Sbjct: 187 KLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETG 246
Query: 280 KTLSPDDVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKK 339
+ L D+ I Q F G+ET+S +L+F LY L +NP + K +E A
Sbjct: 247 EPLD-------DENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEE-AARVL 298
Query: 340 KEGELTYEICHKMSYLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKISIPT 399
+ +Y+ ++ Y+ V EALR++P+ P + K+ + + L+ G ++ +
Sbjct: 299 VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFS-LYAKEDTVLGGEYPLEKGDELMVLI 357
Query: 400 FAIHYDPEYYPDP-EKFDPERFSPENIESRPHYTYLPFGDGPRNCIGK 446
+H D + D E+F PERF EN + P + + PFG+G R CIG+
Sbjct: 358 PQLHRDKTIWGDDVEEFRPERF--ENPSAIPQHAFKPFGNGQRACIGQ 403
>pdb|2HPD|A Chain A, Crystal Structure Of Hemoprotein Domain Of P450bm-3, A
Prototype For Microsomal P450's
pdb|2HPD|B Chain B, Crystal Structure Of Hemoprotein Domain Of P450bm-3, A
Prototype For Microsomal P450's
pdb|1FAG|A Chain A, Structure Of Cytochrome P450
pdb|1FAG|B Chain B, Structure Of Cytochrome P450
pdb|1FAG|C Chain C, Structure Of Cytochrome P450
pdb|1FAG|D Chain D, Structure Of Cytochrome P450
Length = 471
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 93/350 (26%), Positives = 158/350 (45%), Gaps = 36/350 (10%)
Query: 108 RDPIAGHLFLS--KGEYWKRLRNKLSPTFTSGKIKYMFPLIKKCSDQLITTIRKQIGESK 165
RD LF S + WK+ N L P+F+ +K ++ + QL+ + +
Sbjct: 79 RDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADE- 137
Query: 166 QMSLEVKDYCARYTTDVIGTTAFGIEINSLENPDSEFRQVSLLVMKPSVLQMLKAVLSEL 225
+EV + R T D IG F NS +R P + M++A L E
Sbjct: 138 --HIEVPEDMTRLTLDTIGLCGFNYRFNSF------YRDQP----HPFITSMVRA-LDEA 184
Query: 226 IPLIKYLNLK--IFDPRISQF------FSNLVKTNLSYREKNNIKRDDFLNIMMQLQIAQ 277
+ ++ N +D QF ++LV ++ R+ + + DD L M+ + +
Sbjct: 185 MNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPE 244
Query: 278 RGKTLSPDDVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMAT 337
G+ L D+ I Q F G+ET+S +L+F LY L +NP + K +E A
Sbjct: 245 TGEPLD-------DENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEE-AAR 296
Query: 338 KKKEGELTYEICHKMSYLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKISI 397
+ +Y+ ++ Y+ V EALR++P+ P + K+ + + L+ G ++ +
Sbjct: 297 VLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFS-LYAKEDTVLGGEYPLEKGDELMV 355
Query: 398 PTFAIHYDPEYYPDP-EKFDPERFSPENIESRPHYTYLPFGDGPRNCIGK 446
+H D + D E+F PERF EN + P + + PFG+G R CIG+
Sbjct: 356 LIPQLHRDKTIWGDDVEEFRPERF--ENPSAIPQHAFKPFGNGQRACIGQ 403
>pdb|1ZO4|A Chain A, Crystal Structure Of A328s Mutant Of The Heme Domain Of
P450bm-3
pdb|1ZO4|B Chain B, Crystal Structure Of A328s Mutant Of The Heme Domain Of
P450bm-3
Length = 473
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 93/350 (26%), Positives = 158/350 (45%), Gaps = 36/350 (10%)
Query: 108 RDPIAGHLFLS--KGEYWKRLRNKLSPTFTSGKIKYMFPLIKKCSDQLITTIRKQIGESK 165
RD LF S + WK+ N L P+F+ +K ++ + QL+ + +
Sbjct: 82 RDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADE- 140
Query: 166 QMSLEVKDYCARYTTDVIGTTAFGIEINSLENPDSEFRQVSLLVMKPSVLQMLKAVLSEL 225
+EV + R T D IG F NS +R P + M++A L E
Sbjct: 141 --HIEVPEDMTRLTLDTIGLCGFNYRFNSF------YRDQP----HPFITSMVRA-LDEA 187
Query: 226 IPLIKYLNLK--IFDPRISQF------FSNLVKTNLSYREKNNIKRDDFLNIMMQLQIAQ 277
+ ++ N +D QF ++LV ++ R+ + + DD L M+ + +
Sbjct: 188 MNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPE 247
Query: 278 RGKTLSPDDVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMAT 337
G+ L D+ I Q F G+ET+S +L+F LY L +NP + K +E A
Sbjct: 248 TGEPLD-------DENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEE-AAR 299
Query: 338 KKKEGELTYEICHKMSYLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKISI 397
+ +Y+ ++ Y+ V EALR++P+ P + K+ + + L+ G ++ +
Sbjct: 300 VLVDPVPSYKQVKQLKYVGMVLNEALRLWPTSPAFS-LYAKEDTVLGGEYPLEKGDELMV 358
Query: 398 PTFAIHYDPEYYPDP-EKFDPERFSPENIESRPHYTYLPFGDGPRNCIGK 446
+H D + D E+F PERF EN + P + + PFG+G R CIG+
Sbjct: 359 LIPQLHRDKTIWGDDVEEFRPERF--ENPSAIPQHAFKPFGNGQRACIGQ 406
>pdb|3M4V|A Chain A, Crystal Structure Of The A330p Mutant Of Cytochrome P450
Bm3
pdb|3M4V|B Chain B, Crystal Structure Of The A330p Mutant Of Cytochrome P450
Bm3
Length = 482
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 93/350 (26%), Positives = 158/350 (45%), Gaps = 36/350 (10%)
Query: 108 RDPIAGHLFLS--KGEYWKRLRNKLSPTFTSGKIKYMFPLIKKCSDQLITTIRKQIGESK 165
RD LF S + WK+ N L P+F+ +K ++ + QL+ + +
Sbjct: 80 RDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADE- 138
Query: 166 QMSLEVKDYCARYTTDVIGTTAFGIEINSLENPDSEFRQVSLLVMKPSVLQMLKAVLSEL 225
+EV + R T D IG F NS +R P + M++A L E
Sbjct: 139 --HIEVPEDMTRLTLDTIGLCGFNYRFNSF------YRDQP----HPFITSMVRA-LDEA 185
Query: 226 IPLIKYLNLK--IFDPRISQF------FSNLVKTNLSYREKNNIKRDDFLNIMMQLQIAQ 277
+ ++ N +D QF ++LV ++ R+ + + DD L M+ + +
Sbjct: 186 MNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPE 245
Query: 278 RGKTLSPDDVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMAT 337
G+ L D+ I Q F G+ET+S +L+F LY L +NP + K +E A
Sbjct: 246 TGEPLD-------DENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEE-AAR 297
Query: 338 KKKEGELTYEICHKMSYLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKISI 397
+ +Y+ ++ Y+ V EALR++P+ P + K+ + + L+ G ++ +
Sbjct: 298 VLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPPFS-LYAKEDTVLGGEYPLEKGDELMV 356
Query: 398 PTFAIHYDPEYYPDP-EKFDPERFSPENIESRPHYTYLPFGDGPRNCIGK 446
+H D + D E+F PERF EN + P + + PFG+G R CIG+
Sbjct: 357 LIPQLHRDKTIWGDDVEEFRPERF--ENPSAIPQHAFKPFGNGQRACIGQ 404
>pdb|2IJ4|A Chain A, Structure Of The A264k Mutant Of Cytochrome P450 Bm3
pdb|2IJ4|B Chain B, Structure Of The A264k Mutant Of Cytochrome P450 Bm3
Length = 470
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 93/350 (26%), Positives = 158/350 (45%), Gaps = 36/350 (10%)
Query: 108 RDPIAGHLFLS--KGEYWKRLRNKLSPTFTSGKIKYMFPLIKKCSDQLITTIRKQIGESK 165
RD LF S + WK+ N L P+F+ +K ++ + QL+ + +
Sbjct: 79 RDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADE- 137
Query: 166 QMSLEVKDYCARYTTDVIGTTAFGIEINSLENPDSEFRQVSLLVMKPSVLQMLKAVLSEL 225
+EV + R T D IG F NS +R P + M++A L E
Sbjct: 138 --HIEVPEDMTRLTLDTIGLCGFNYRFNSF------YRDQP----HPFITSMVRA-LDEA 184
Query: 226 IPLIKYLNLK--IFDPRISQF------FSNLVKTNLSYREKNNIKRDDFLNIMMQLQIAQ 277
+ ++ N +D QF ++LV ++ R+ + + DD L M+ + +
Sbjct: 185 MNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPE 244
Query: 278 RGKTLSPDDVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMAT 337
G+ L D+ I Q F G+ET+S +L+F LY L +NP + K +E A
Sbjct: 245 TGEPLD-------DENIRYQIITFLIKGHETTSGLLSFALYFLVKNPHVLQKAAEE-AAR 296
Query: 338 KKKEGELTYEICHKMSYLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKISI 397
+ +Y+ ++ Y+ V EALR++P+ P + K+ + + L+ G ++ +
Sbjct: 297 VLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFS-LYAKEDTVLGGEYPLEKGDELMV 355
Query: 398 PTFAIHYDPEYYPDP-EKFDPERFSPENIESRPHYTYLPFGDGPRNCIGK 446
+H D + D E+F PERF EN + P + + PFG+G R CIG+
Sbjct: 356 LIPQLHRDKTIWGDDVEEFRPERF--ENPSAIPQHAFKPFGNGQRACIGQ 403
>pdb|1SMI|A Chain A, A Single Mutation Of P450 Bm3 Induces The Conformational
Rearrangement Seen Upon Substrate-Binding In Wild-Type
Enzyme
pdb|1SMI|B Chain B, A Single Mutation Of P450 Bm3 Induces The Conformational
Rearrangement Seen Upon Substrate-Binding In Wild-Type
Enzyme
pdb|1SMJ|A Chain A, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|B Chain B, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|C Chain C, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|D Chain D, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
Length = 471
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 93/350 (26%), Positives = 158/350 (45%), Gaps = 36/350 (10%)
Query: 108 RDPIAGHLFLS--KGEYWKRLRNKLSPTFTSGKIKYMFPLIKKCSDQLITTIRKQIGESK 165
RD LF S + WK+ N L P+F+ +K ++ + QL+ + +
Sbjct: 79 RDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADE- 137
Query: 166 QMSLEVKDYCARYTTDVIGTTAFGIEINSLENPDSEFRQVSLLVMKPSVLQMLKAVLSEL 225
+EV + R T D IG F NS +R P + M++A L E
Sbjct: 138 --HIEVPEDMTRLTLDTIGLCGFNYRFNSF------YRDQP----HPFITSMVRA-LDEA 184
Query: 226 IPLIKYLNLK--IFDPRISQF------FSNLVKTNLSYREKNNIKRDDFLNIMMQLQIAQ 277
+ ++ N +D QF ++LV ++ R+ + + DD L M+ + +
Sbjct: 185 MNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPE 244
Query: 278 RGKTLSPDDVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMAT 337
G+ L D+ I Q F G+ET+S +L+F LY L +NP + K +E A
Sbjct: 245 TGEPLD-------DENIRYQIITFLIEGHETTSGLLSFALYFLVKNPHVLQKAAEE-AAR 296
Query: 338 KKKEGELTYEICHKMSYLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKISI 397
+ +Y+ ++ Y+ V EALR++P+ P + K+ + + L+ G ++ +
Sbjct: 297 VLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFS-LYAKEDTVLGGEYPLEKGDELMV 355
Query: 398 PTFAIHYDPEYYPDP-EKFDPERFSPENIESRPHYTYLPFGDGPRNCIGK 446
+H D + D E+F PERF EN + P + + PFG+G R CIG+
Sbjct: 356 LIPQLHRDKTIWGDDVEEFRPERF--ENPSAIPQHAFKPFGNGQRACIGQ 403
>pdb|4DUC|A Chain A, Cytochrome P450 Bm3h-2g9 Mri Sensor, No Ligand
pdb|4DUC|B Chain B, Cytochrome P450 Bm3h-2g9 Mri Sensor, No Ligand
Length = 472
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 87/333 (26%), Positives = 152/333 (45%), Gaps = 34/333 (10%)
Query: 123 WKRLRNKLSPTFTSGKIKYMFPLIKKCSDQLITTIRKQIGESKQMSLEVKDYCARYTTDV 182
WK+ N L P+F+ +K ++ + QL+ + + +EV + R T D
Sbjct: 97 WKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADE---HIEVPEDMTRLTLDT 153
Query: 183 IGTTAFGIEINSLENPDSEFRQVSLLVMKPSVLQMLKAVLSELIPLIKYLNLK--IFDPR 240
IG F NS +R P + M++A L E + ++ N +D
Sbjct: 154 IGLCGFNYRFNSF------YRDQP----HPFITSMVRA-LDEAMNKLQRANPDDPAYDEN 202
Query: 241 ISQF------FSNLVKTNLSYREKNNIKRDDFLNIMMQLQIAQRGKTLSPDDVEMTDDVI 294
QF ++LV ++ R+ + + DD L M+ + + G+ L D+ I
Sbjct: 203 KRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLD-------DENI 255
Query: 295 TAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSY 354
Q F G+E++S +L+F LY L +NP + K +E A + +Y+ ++ Y
Sbjct: 256 RYQIITFLIAGHESTSGLLSFALYFLVKNPHVLQKAAEE-AARVLVDPVPSYKQVKQLKY 314
Query: 355 LDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPEYYPDP-E 413
+ V EALR++P+ P + K+ + + L+ G ++ + +H D + D E
Sbjct: 315 VGMVLNEALRLWPTAPAFS-LYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVE 373
Query: 414 KFDPERFSPENIESRPHYTYLPFGDGPRNCIGK 446
+F PERF EN + P + + PFG+G R CIG+
Sbjct: 374 EFRPERF--ENPSAIPQHAFKPFGNGQRACIGQ 404
>pdb|2IJ3|A Chain A, Structure Of The A264h Mutant Of Cytochrome P450 Bm3
pdb|2IJ3|B Chain B, Structure Of The A264h Mutant Of Cytochrome P450 Bm3
Length = 470
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 93/350 (26%), Positives = 158/350 (45%), Gaps = 36/350 (10%)
Query: 108 RDPIAGHLFLS--KGEYWKRLRNKLSPTFTSGKIKYMFPLIKKCSDQLITTIRKQIGESK 165
RD LF S + WK+ N L P+F+ +K ++ + QL+ + +
Sbjct: 79 RDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADE- 137
Query: 166 QMSLEVKDYCARYTTDVIGTTAFGIEINSLENPDSEFRQVSLLVMKPSVLQMLKAVLSEL 225
+EV + R T D IG F NS +R P + M++A L E
Sbjct: 138 --HIEVPEDMTRLTLDTIGLCGFNYRFNSF------YRDQP----HPFITSMVRA-LDEA 184
Query: 226 IPLIKYLNLK--IFDPRISQF------FSNLVKTNLSYREKNNIKRDDFLNIMMQLQIAQ 277
+ ++ N +D QF ++LV ++ R+ + + DD L M+ + +
Sbjct: 185 MNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPE 244
Query: 278 RGKTLSPDDVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMAT 337
G+ L D+ I Q F G+ET+S +L+F LY L +NP + K +E A
Sbjct: 245 TGEPLD-------DENIRYQIITFLIHGHETTSGLLSFALYFLVKNPHVLQKAAEE-AAR 296
Query: 338 KKKEGELTYEICHKMSYLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKISI 397
+ +Y+ ++ Y+ V EALR++P+ P + K+ + + L+ G ++ +
Sbjct: 297 VLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFS-LYAKEDTVLGGEYPLEKGDELMV 355
Query: 398 PTFAIHYDPEYYPDP-EKFDPERFSPENIESRPHYTYLPFGDGPRNCIGK 446
+H D + D E+F PERF EN + P + + PFG+G R CIG+
Sbjct: 356 LIPQLHRDKTIWGDDVEEFRPERF--ENPSAIPQHAFKPFGNGQRACIGQ 403
>pdb|3EKF|A Chain A, Crystal Structure Of The A264q Heme Domain Of Cytochrome
P450 Bm3
pdb|3EKF|B Chain B, Crystal Structure Of The A264q Heme Domain Of Cytochrome
P450 Bm3
Length = 470
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 93/350 (26%), Positives = 158/350 (45%), Gaps = 36/350 (10%)
Query: 108 RDPIAGHLFLS--KGEYWKRLRNKLSPTFTSGKIKYMFPLIKKCSDQLITTIRKQIGESK 165
RD LF S + WK+ N L P+F+ +K ++ + QL+ + +
Sbjct: 79 RDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADE- 137
Query: 166 QMSLEVKDYCARYTTDVIGTTAFGIEINSLENPDSEFRQVSLLVMKPSVLQMLKAVLSEL 225
+EV + R T D IG F NS +R P + M++A L E
Sbjct: 138 --HIEVPEDMTRLTLDTIGLCGFNYRFNSF------YRDQP----HPFITSMVRA-LDEA 184
Query: 226 IPLIKYLNLK--IFDPRISQF------FSNLVKTNLSYREKNNIKRDDFLNIMMQLQIAQ 277
+ ++ N +D QF ++LV ++ R+ + + DD L M+ + +
Sbjct: 185 MNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPE 244
Query: 278 RGKTLSPDDVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMAT 337
G+ L D+ I Q F G+ET+S +L+F LY L +NP + K +E A
Sbjct: 245 TGEPLD-------DENIRYQIITFLIQGHETTSGLLSFALYFLVKNPHVLQKAAEE-AAR 296
Query: 338 KKKEGELTYEICHKMSYLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKISI 397
+ +Y+ ++ Y+ V EALR++P+ P + K+ + + L+ G ++ +
Sbjct: 297 VLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFS-LYAKEDTVLGGEYPLEKGDELMV 355
Query: 398 PTFAIHYDPEYYPDP-EKFDPERFSPENIESRPHYTYLPFGDGPRNCIGK 446
+H D + D E+F PERF EN + P + + PFG+G R CIG+
Sbjct: 356 LIPQLHRDKTIWGDDVEEFRPERF--ENPSAIPQHAFKPFGNGQRACIGQ 403
>pdb|4DUD|A Chain A, Cytochrome P450 Bm3h-2g9c6 Mri Sensor, No Ligand
pdb|4DUD|B Chain B, Cytochrome P450 Bm3h-2g9c6 Mri Sensor, No Ligand
pdb|4DUE|A Chain A, Cytochrome P450 Bm3h-2g9c6 Mri Sensor Bound To Serotonin
pdb|4DUE|B Chain B, Cytochrome P450 Bm3h-2g9c6 Mri Sensor Bound To Serotonin
Length = 471
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 87/333 (26%), Positives = 152/333 (45%), Gaps = 34/333 (10%)
Query: 123 WKRLRNKLSPTFTSGKIKYMFPLIKKCSDQLITTIRKQIGESKQMSLEVKDYCARYTTDV 182
WK+ N L P+F+ +K ++ + QL+ + + +EV + R T D
Sbjct: 96 WKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADE---HIEVPEDMTRLTLDT 152
Query: 183 IGTTAFGIEINSLENPDSEFRQVSLLVMKPSVLQMLKAVLSELIPLIKYLNLK--IFDPR 240
IG F NS +R P + M++A L E + ++ N +D
Sbjct: 153 IGLCGFNYRFNSF------YRDQP----HPFITSMVRA-LDEAMNKLQRANPDDPAYDEN 201
Query: 241 ISQF------FSNLVKTNLSYREKNNIKRDDFLNIMMQLQIAQRGKTLSPDDVEMTDDVI 294
QF ++LV ++ R+ + + DD L M+ + + G+ L D+ I
Sbjct: 202 KRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLD-------DENI 254
Query: 295 TAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSY 354
Q F G+E++S +L+F LY L +NP + K +E A + +Y+ ++ Y
Sbjct: 255 RYQIITFLIAGHESTSGLLSFALYFLVKNPHVLQKAAEE-AARVLVDPVPSYKQVKQLKY 313
Query: 355 LDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPEYYPDP-E 413
+ V EALR++P+ P + K+ + + L+ G ++ + +H D + D E
Sbjct: 314 VGMVLNEALRLWPTAPAFS-LYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVE 372
Query: 414 KFDPERFSPENIESRPHYTYLPFGDGPRNCIGK 446
+F PERF EN + P + + PFG+G R CIG+
Sbjct: 373 EFRPERF--ENPSAIPQHAFKPFGNGQRACIGQ 403
>pdb|1P0X|A Chain A, F393y Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0X|B Chain B, F393y Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 92/350 (26%), Positives = 158/350 (45%), Gaps = 36/350 (10%)
Query: 108 RDPIAGHLFLS--KGEYWKRLRNKLSPTFTSGKIKYMFPLIKKCSDQLITTIRKQIGESK 165
RD LF S + WK+ N L P+F+ +K ++ + QL+ + +
Sbjct: 79 RDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADE- 137
Query: 166 QMSLEVKDYCARYTTDVIGTTAFGIEINSLENPDSEFRQVSLLVMKPSVLQMLKAVLSEL 225
+EV + R T D IG F NS +R P + M++A L E
Sbjct: 138 --HIEVPEDMTRLTLDTIGLCGFNYRFNSF------YRDQP----HPFITSMVRA-LDEA 184
Query: 226 IPLIKYLNLK--IFDPRISQF------FSNLVKTNLSYREKNNIKRDDFLNIMMQLQIAQ 277
+ ++ N +D QF ++LV ++ R+ + + DD L M+ + +
Sbjct: 185 MNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPE 244
Query: 278 RGKTLSPDDVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMAT 337
G+ L D+ I Q F G+ET+S +L+F LY L +NP + K +E A
Sbjct: 245 TGEPLD-------DENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEE-AAR 296
Query: 338 KKKEGELTYEICHKMSYLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKISI 397
+ +Y+ ++ Y+ V EALR++P+ P + K+ + + L+ G ++ +
Sbjct: 297 VLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFS-LYAKEDTVLGGEYPLEKGDELMV 355
Query: 398 PTFAIHYDPEYYPDP-EKFDPERFSPENIESRPHYTYLPFGDGPRNCIGK 446
+H D + D E+F PERF EN + P + + P+G+G R CIG+
Sbjct: 356 LIPQLHRDKTIWGDDVEEFRPERF--ENPSAIPQHAFKPYGNGQRACIGQ 403
>pdb|4DUF|A Chain A, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|B Chain B, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|C Chain C, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|D Chain D, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
Length = 471
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 87/333 (26%), Positives = 152/333 (45%), Gaps = 34/333 (10%)
Query: 123 WKRLRNKLSPTFTSGKIKYMFPLIKKCSDQLITTIRKQIGESKQMSLEVKDYCARYTTDV 182
WK+ N L P+F+ +K ++ + QL+ + + +EV + R T D
Sbjct: 96 WKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADE---HIEVPEDMTRLTLDT 152
Query: 183 IGTTAFGIEINSLENPDSEFRQVSLLVMKPSVLQMLKAVLSELIPLIKYLNLK--IFDPR 240
IG F NS +R P + M++A L E + ++ N +D
Sbjct: 153 IGLCGFNYRFNSF------YRDQP----HPFITSMVRA-LDEAMNKLQRANPDDPAYDEN 201
Query: 241 ISQF------FSNLVKTNLSYREKNNIKRDDFLNIMMQLQIAQRGKTLSPDDVEMTDDVI 294
QF ++LV ++ R+ + + DD L M+ + + G+ L D+ I
Sbjct: 202 KRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLD-------DENI 254
Query: 295 TAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSY 354
Q F G+E++S +L+F LY L +NP + K +E A + +Y+ ++ Y
Sbjct: 255 RYQIITFLIAGHESTSGLLSFALYFLVKNPHVLQKAAEE-AARVLVDPVPSYKQVKQLKY 313
Query: 355 LDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPEYYPDP-E 413
+ V EALR++P+ P + K+ + + L+ G ++ + +H D + D E
Sbjct: 314 VGMVLNEALRLWPTAPAFS-LYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVE 372
Query: 414 KFDPERFSPENIESRPHYTYLPFGDGPRNCIGK 446
+F PERF EN + P + + PFG+G R CIG+
Sbjct: 373 EFRPERF--ENPSAIPQHAFKPFGNGQRACIGQ 403
>pdb|1YQO|A Chain A, T268a Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1YQO|B Chain B, T268a Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 92/350 (26%), Positives = 157/350 (44%), Gaps = 36/350 (10%)
Query: 108 RDPIAGHLFLS--KGEYWKRLRNKLSPTFTSGKIKYMFPLIKKCSDQLITTIRKQIGESK 165
RD LF S + WK+ N L P+F+ +K ++ + QL+ + +
Sbjct: 79 RDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADE- 137
Query: 166 QMSLEVKDYCARYTTDVIGTTAFGIEINSLENPDSEFRQVSLLVMKPSVLQMLKAVLSEL 225
+EV + R T D IG F NS +R P + M++A L E
Sbjct: 138 --HIEVPEDMTRLTLDTIGLCGFNYRFNSF------YRDQP----HPFITSMVRA-LDEA 184
Query: 226 IPLIKYLNLK--IFDPRISQF------FSNLVKTNLSYREKNNIKRDDFLNIMMQLQIAQ 277
+ ++ N +D QF ++LV ++ R+ + + DD L M+ + +
Sbjct: 185 MNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPE 244
Query: 278 RGKTLSPDDVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMAT 337
G+ L D+ I Q F G+E +S +L+F LY L +NP + K +E A
Sbjct: 245 TGEPLD-------DENIRYQIITFLIAGHEATSGLLSFALYFLVKNPHVLQKAAEE-AAR 296
Query: 338 KKKEGELTYEICHKMSYLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKISI 397
+ +Y+ ++ Y+ V EALR++P+ P + K+ + + L+ G ++ +
Sbjct: 297 VLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFS-LYAKEDTVLGGEYPLEKGDELMV 355
Query: 398 PTFAIHYDPEYYPDP-EKFDPERFSPENIESRPHYTYLPFGDGPRNCIGK 446
+H D + D E+F PERF EN + P + + PFG+G R CIG+
Sbjct: 356 LIPQLHRDKTIWGDDVEEFRPERF--ENPSAIPQHAFKPFGNGQRACIGQ 403
>pdb|1P0W|A Chain A, F393w Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0W|B Chain B, F393w Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 92/350 (26%), Positives = 158/350 (45%), Gaps = 36/350 (10%)
Query: 108 RDPIAGHLFLS--KGEYWKRLRNKLSPTFTSGKIKYMFPLIKKCSDQLITTIRKQIGESK 165
RD LF S + WK+ N L P+F+ +K ++ + QL+ + +
Sbjct: 79 RDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADE- 137
Query: 166 QMSLEVKDYCARYTTDVIGTTAFGIEINSLENPDSEFRQVSLLVMKPSVLQMLKAVLSEL 225
+EV + R T D IG F NS +R P + M++A L E
Sbjct: 138 --HIEVPEDMTRLTLDTIGLCGFNYRFNSF------YRDQP----HPFITSMVRA-LDEA 184
Query: 226 IPLIKYLNLK--IFDPRISQF------FSNLVKTNLSYREKNNIKRDDFLNIMMQLQIAQ 277
+ ++ N +D QF ++LV ++ R+ + + DD L M+ + +
Sbjct: 185 MNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPE 244
Query: 278 RGKTLSPDDVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMAT 337
G+ L D+ I Q F G+ET+S +L+F LY L +NP + K +E A
Sbjct: 245 TGEPLD-------DENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEE-AAR 296
Query: 338 KKKEGELTYEICHKMSYLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKISI 397
+ +Y+ ++ Y+ V EALR++P+ P + K+ + + L+ G ++ +
Sbjct: 297 VLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFS-LYAKEDTVLGGEYPLEKGDELMV 355
Query: 398 PTFAIHYDPEYYPDP-EKFDPERFSPENIESRPHYTYLPFGDGPRNCIGK 446
+H D + D E+F PERF EN + P + + P+G+G R CIG+
Sbjct: 356 LIPQLHRDKTIWGDDVEEFRPERF--ENPSAIPQHAFKPWGNGQRACIGQ 403
>pdb|3EKB|A Chain A, Crystal Structure Of The A264c Mutant Heme Domain Of
Cytochrome P450 Bm3
pdb|3EKB|B Chain B, Crystal Structure Of The A264c Mutant Heme Domain Of
Cytochrome P450 Bm3
Length = 470
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 93/350 (26%), Positives = 158/350 (45%), Gaps = 36/350 (10%)
Query: 108 RDPIAGHLFLS--KGEYWKRLRNKLSPTFTSGKIKYMFPLIKKCSDQLITTIRKQIGESK 165
RD LF S + WK+ N L P+F+ +K ++ + QL+ + +
Sbjct: 79 RDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADE- 137
Query: 166 QMSLEVKDYCARYTTDVIGTTAFGIEINSLENPDSEFRQVSLLVMKPSVLQMLKAVLSEL 225
+EV + R T D IG F NS +R P + M++A L E
Sbjct: 138 --HIEVPEDMTRLTLDTIGLCGFNYRFNSF------YRDQP----HPFITSMVRA-LDEA 184
Query: 226 IPLIKYLNLK--IFDPRISQF------FSNLVKTNLSYREKNNIKRDDFLNIMMQLQIAQ 277
+ ++ N +D QF ++LV ++ R+ + + DD L M+ + +
Sbjct: 185 MNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPE 244
Query: 278 RGKTLSPDDVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMAT 337
G+ L D+ I Q F G+ET+S +L+F LY L +NP + K +E A
Sbjct: 245 TGEPLD-------DENIRYQIITFLICGHETTSGLLSFALYFLVKNPHVLQKAAEE-AAR 296
Query: 338 KKKEGELTYEICHKMSYLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKISI 397
+ +Y+ ++ Y+ V EALR++P+ P + K+ + + L+ G ++ +
Sbjct: 297 VLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFS-LYAKEDTVLGGEYPLEKGDELMV 355
Query: 398 PTFAIHYDPEYYPDP-EKFDPERFSPENIESRPHYTYLPFGDGPRNCIGK 446
+H D + D E+F PERF EN + P + + PFG+G R CIG+
Sbjct: 356 LIPQLHRDKTIWGDDVEEFRPERF--ENPSAIPQHAFKPFGNGQRACIGQ 403
>pdb|3EKD|A Chain A, Crystal Structure Of The A264m Heme Domain Of Cytochrome
P450 Bm3
pdb|3EKD|B Chain B, Crystal Structure Of The A264m Heme Domain Of Cytochrome
P450 Bm3
Length = 470
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 93/350 (26%), Positives = 158/350 (45%), Gaps = 36/350 (10%)
Query: 108 RDPIAGHLFLS--KGEYWKRLRNKLSPTFTSGKIKYMFPLIKKCSDQLITTIRKQIGESK 165
RD LF S + WK+ N L P+F+ +K ++ + QL+ + +
Sbjct: 79 RDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADE- 137
Query: 166 QMSLEVKDYCARYTTDVIGTTAFGIEINSLENPDSEFRQVSLLVMKPSVLQMLKAVLSEL 225
+EV + R T D IG F NS +R P + M++A L E
Sbjct: 138 --HIEVPEDMTRLTLDTIGLCGFNYRFNSF------YRDQP----HPFITSMVRA-LDEA 184
Query: 226 IPLIKYLNLK--IFDPRISQF------FSNLVKTNLSYREKNNIKRDDFLNIMMQLQIAQ 277
+ ++ N +D QF ++LV ++ R+ + + DD L M+ + +
Sbjct: 185 MNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPE 244
Query: 278 RGKTLSPDDVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMAT 337
G+ L D+ I Q F G+ET+S +L+F LY L +NP + K +E A
Sbjct: 245 TGEPLD-------DENIRYQIITFLIMGHETTSGLLSFALYFLVKNPHVLQKAAEE-AAR 296
Query: 338 KKKEGELTYEICHKMSYLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKISI 397
+ +Y+ ++ Y+ V EALR++P+ P + K+ + + L+ G ++ +
Sbjct: 297 VLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFS-LYAKEDTVLGGEYPLEKGDELMV 355
Query: 398 PTFAIHYDPEYYPDP-EKFDPERFSPENIESRPHYTYLPFGDGPRNCIGK 446
+H D + D E+F PERF EN + P + + PFG+G R CIG+
Sbjct: 356 LIPQLHRDKTIWGDDVEEFRPERF--ENPSAIPQHAFKPFGNGQRACIGQ 403
>pdb|1YQP|A Chain A, T268n Mutant Cytochrome Domain Of Flavocytochrome P450 Bm3
pdb|1YQP|B Chain B, T268n Mutant Cytochrome Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 92/350 (26%), Positives = 157/350 (44%), Gaps = 36/350 (10%)
Query: 108 RDPIAGHLFLS--KGEYWKRLRNKLSPTFTSGKIKYMFPLIKKCSDQLITTIRKQIGESK 165
RD LF S + WK+ N L P+F+ +K ++ + QL+ + +
Sbjct: 79 RDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADE- 137
Query: 166 QMSLEVKDYCARYTTDVIGTTAFGIEINSLENPDSEFRQVSLLVMKPSVLQMLKAVLSEL 225
+EV + R T D IG F NS +R P + M++A L E
Sbjct: 138 --HIEVPEDMTRLTLDTIGLCGFNYRFNSF------YRDQP----HPFITSMVRA-LDEA 184
Query: 226 IPLIKYLNLK--IFDPRISQF------FSNLVKTNLSYREKNNIKRDDFLNIMMQLQIAQ 277
+ ++ N +D QF ++LV ++ R+ + + DD L M+ + +
Sbjct: 185 MNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPE 244
Query: 278 RGKTLSPDDVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMAT 337
G+ L D+ I Q F G+E +S +L+F LY L +NP + K +E A
Sbjct: 245 TGEPLD-------DENIRYQIITFLIAGHENTSGLLSFALYFLVKNPHVLQKAAEE-AAR 296
Query: 338 KKKEGELTYEICHKMSYLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKISI 397
+ +Y+ ++ Y+ V EALR++P+ P + K+ + + L+ G ++ +
Sbjct: 297 VLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFS-LYAKEDTVLGGEYPLEKGDELMV 355
Query: 398 PTFAIHYDPEYYPDP-EKFDPERFSPENIESRPHYTYLPFGDGPRNCIGK 446
+H D + D E+F PERF EN + P + + PFG+G R CIG+
Sbjct: 356 LIPQLHRDKTIWGDDVEEFRPERF--ENPSAIPQHAFKPFGNGQRACIGQ 403
>pdb|3DGI|A Chain A, Crystal Structure Of F87aT268A MUTANT OF CYP BM3
pdb|3DGI|B Chain B, Crystal Structure Of F87aT268A MUTANT OF CYP BM3
Length = 461
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 87/333 (26%), Positives = 151/333 (45%), Gaps = 34/333 (10%)
Query: 123 WKRLRNKLSPTFTSGKIKYMFPLIKKCSDQLITTIRKQIGESKQMSLEVKDYCARYTTDV 182
WK+ N L P+F+ +K ++ + QL+ + + +EV + R T D
Sbjct: 96 WKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADE---HIEVPEDMTRLTLDT 152
Query: 183 IGTTAFGIEINSLENPDSEFRQVSLLVMKPSVLQMLKAVLSELIPLIKYLNLK--IFDPR 240
IG F NS +R P + M++A L E + ++ N +D
Sbjct: 153 IGLCGFNYRFNSF------YRDQP----HPFITSMVRA-LDEAMNKLQRANPDDPAYDEN 201
Query: 241 ISQF------FSNLVKTNLSYREKNNIKRDDFLNIMMQLQIAQRGKTLSPDDVEMTDDVI 294
QF ++LV ++ R+ + + DD L M+ + + G+ L D+ I
Sbjct: 202 KRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLD-------DENI 254
Query: 295 TAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSY 354
Q F G+E +S +L+F LY L +NP + K +E A + +Y+ ++ Y
Sbjct: 255 RYQIITFLIAGHEATSGLLSFALYFLVKNPHVLQKAAEE-AARVLVDPVPSYKQVKQLKY 313
Query: 355 LDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPEYYPDP-E 413
+ V EALR++P+ P + K+ + + L+ G ++ + +H D + D E
Sbjct: 314 VGMVLNEALRLWPTAPAFS-LYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVE 372
Query: 414 KFDPERFSPENIESRPHYTYLPFGDGPRNCIGK 446
+F PERF EN + P + + PFG+G R CIG+
Sbjct: 373 EFRPERF--ENPSAIPQHAFKPFGNGQRACIGQ 403
>pdb|1FAH|A Chain A, Structure Of Cytochrome P450
pdb|1FAH|B Chain B, Structure Of Cytochrome P450
Length = 471
Score = 102 bits (253), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 92/350 (26%), Positives = 157/350 (44%), Gaps = 36/350 (10%)
Query: 108 RDPIAGHLFLS--KGEYWKRLRNKLSPTFTSGKIKYMFPLIKKCSDQLITTIRKQIGESK 165
RD LF S + WK+ N L P+F+ +K ++ + QL+ + +
Sbjct: 79 RDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADE- 137
Query: 166 QMSLEVKDYCARYTTDVIGTTAFGIEINSLENPDSEFRQVSLLVMKPSVLQMLKAVLSEL 225
+EV + R T D IG F NS +R P + M++A L E
Sbjct: 138 --HIEVPEDMTRLTLDTIGLCGFNYRFNSF------YRDQP----HPFITSMVRA-LDEA 184
Query: 226 IPLIKYLNLK--IFDPRISQF------FSNLVKTNLSYREKNNIKRDDFLNIMMQLQIAQ 277
+ ++ N +D QF ++LV ++ R+ + + DD L M+ + +
Sbjct: 185 MNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPE 244
Query: 278 RGKTLSPDDVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMAT 337
G+ L D+ I Q F G+E +S +L+F LY L +NP + K +E A
Sbjct: 245 TGEPLD-------DENIRYQIITFLIAGHEATSGLLSFALYFLVKNPHVLQKAAEE-AAR 296
Query: 338 KKKEGELTYEICHKMSYLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKISI 397
+ +Y+ ++ Y+ V EALR++P+ P + K+ + + L+ G ++ +
Sbjct: 297 VLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFS-LYAKEDTVLGGEYPLEKGDELMV 355
Query: 398 PTFAIHYDPEYYPDP-EKFDPERFSPENIESRPHYTYLPFGDGPRNCIGK 446
+H D + D E+F PERF EN + P + + PFG+G R CIG+
Sbjct: 356 LIPQLHRDKTIWGDDVEEFRPERF--ENPSAIPQHAFKPFGNGQRACIGQ 403
>pdb|3NPL|A Chain A, Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme Domain,
A Ruthenium Modified P450 Bm3 Mutant
pdb|3NPL|B Chain B, Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme Domain,
A Ruthenium Modified P450 Bm3 Mutant
Length = 470
Score = 102 bits (253), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 92/350 (26%), Positives = 158/350 (45%), Gaps = 36/350 (10%)
Query: 108 RDPIAGHLFLS--KGEYWKRLRNKLSPTFTSGKIKYMFPLIKKCSDQLITTIRKQIGESK 165
RD LF S + W + N L P+F+ +K ++ + QL+ + +
Sbjct: 80 RDFAGDGLFTSWTHEKNWCKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADE- 138
Query: 166 QMSLEVKDYCARYTTDVIGTTAFGIEINSLENPDSEFRQVSLLVMKPSVLQMLKAVLSEL 225
+EV + R T D IG + F NS +R P + M++A L E
Sbjct: 139 --HIEVPEDMTRLTLDTIGLSGFNYRFNSF------YRDQP----HPFITSMVRA-LDEA 185
Query: 226 IPLIKYLNLK--IFDPRISQF------FSNLVKTNLSYREKNNIKRDDFLNIMMQLQIAQ 277
+ ++ N +D QF ++LV ++ R+ + + DD L M+ + +
Sbjct: 186 MNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPE 245
Query: 278 RGKTLSPDDVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMAT 337
G+ L D+ I Q F G+ET+S +L+F LY L +NP + K +E A
Sbjct: 246 TGEPLD-------DENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEE-AAR 297
Query: 338 KKKEGELTYEICHKMSYLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKISI 397
+ +Y+ ++ Y+ V EALR++P+ P + K+ + + L+ G ++ +
Sbjct: 298 VLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFS-LYAKEDTVLGGEYPLEKGDELMV 356
Query: 398 PTFAIHYDPEYYPDP-EKFDPERFSPENIESRPHYTYLPFGDGPRNCIGK 446
+H D + D E+F PERF EN + P + + PFG+G R CIG+
Sbjct: 357 LIPQLHRDKTIWGDDVEEFRPERF--ENPSAIPQHAFKPFGNGQRACIGQ 404
>pdb|1JME|A Chain A, Crystal Structure Of Phe393his Cytochrome P450 Bm3
pdb|1JME|B Chain B, Crystal Structure Of Phe393his Cytochrome P450 Bm3
Length = 455
Score = 101 bits (251), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 92/350 (26%), Positives = 157/350 (44%), Gaps = 36/350 (10%)
Query: 108 RDPIAGHLFLS--KGEYWKRLRNKLSPTFTSGKIKYMFPLIKKCSDQLITTIRKQIGESK 165
RD LF S + WK+ N L P+F+ +K ++ + QL+ + +
Sbjct: 79 RDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADE- 137
Query: 166 QMSLEVKDYCARYTTDVIGTTAFGIEINSLENPDSEFRQVSLLVMKPSVLQMLKAVLSEL 225
+EV + R T D IG F NS +R P + M++A L E
Sbjct: 138 --HIEVPEDMTRLTLDTIGLCGFNYRFNSF------YRDQP----HPFITSMVRA-LDEA 184
Query: 226 IPLIKYLNLK--IFDPRISQF------FSNLVKTNLSYREKNNIKRDDFLNIMMQLQIAQ 277
+ ++ N +D QF ++LV ++ R+ + + DD L M+ + +
Sbjct: 185 MNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPE 244
Query: 278 RGKTLSPDDVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMAT 337
G+ L D+ I Q F G+ET+S +L+F LY L +NP + K +E A
Sbjct: 245 TGEPLD-------DENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEE-AAR 296
Query: 338 KKKEGELTYEICHKMSYLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKISI 397
+ +Y+ ++ Y+ V EALR++P+ P + K+ + + L+ G ++ +
Sbjct: 297 VLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFS-LYAKEDTVLGGEYPLEKGDELMV 355
Query: 398 PTFAIHYDPEYYPDP-EKFDPERFSPENIESRPHYTYLPFGDGPRNCIGK 446
+H D + D E+F PERF EN + P + + P G+G R CIG+
Sbjct: 356 LIPQLHRDKTIWGDDVEEFRPERF--ENPSAIPQHAFKPHGNGQRACIGQ 403
>pdb|1P0V|A Chain A, F393a Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0V|B Chain B, F393a Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 92/350 (26%), Positives = 157/350 (44%), Gaps = 36/350 (10%)
Query: 108 RDPIAGHLFLS--KGEYWKRLRNKLSPTFTSGKIKYMFPLIKKCSDQLITTIRKQIGESK 165
RD LF S + WK+ N L P+F+ +K ++ + QL+ + +
Sbjct: 79 RDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADE- 137
Query: 166 QMSLEVKDYCARYTTDVIGTTAFGIEINSLENPDSEFRQVSLLVMKPSVLQMLKAVLSEL 225
+EV + R T D IG F NS +R P + M++A L E
Sbjct: 138 --HIEVPEDMTRLTLDTIGLCGFNYRFNSF------YRDQP----HPFITSMVRA-LDEA 184
Query: 226 IPLIKYLNLK--IFDPRISQF------FSNLVKTNLSYREKNNIKRDDFLNIMMQLQIAQ 277
+ ++ N +D QF ++LV ++ R+ + + DD L M+ + +
Sbjct: 185 MNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPE 244
Query: 278 RGKTLSPDDVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMAT 337
G+ L D+ I Q F G+ET+S +L+F LY L +NP + K +E A
Sbjct: 245 TGEPLD-------DENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEE-AAR 296
Query: 338 KKKEGELTYEICHKMSYLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKISI 397
+ +Y+ ++ Y+ V EALR++P+ P + K+ + + L+ G ++ +
Sbjct: 297 VLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFS-LYAKEDTVLGGEYPLEKGDELMV 355
Query: 398 PTFAIHYDPEYYPDP-EKFDPERFSPENIESRPHYTYLPFGDGPRNCIGK 446
+H D + D E+F PERF EN + P + + P G+G R CIG+
Sbjct: 356 LIPQLHRDKTIWGDDVEEFRPERF--ENPSAIPQHAFKPAGNGQRACIGQ 403
>pdb|4DUB|A Chain A, Cytochrome P450 Bm3h-9d7 Mri Sensor Bound To Dopamine
pdb|4DUB|B Chain B, Cytochrome P450 Bm3h-9d7 Mri Sensor Bound To Dopamine
Length = 472
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 92/350 (26%), Positives = 157/350 (44%), Gaps = 36/350 (10%)
Query: 108 RDPIAGHLFLS--KGEYWKRLRNKLSPTFTSGKIKYMFPLIKKCSDQLITTIRKQIGESK 165
RD LF S + WK+ N L P+F+ +K ++ + QL+ + +
Sbjct: 80 RDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADE- 138
Query: 166 QMSLEVKDYCARYTTDVIGTTAFGIEINSLENPDSEFRQVSLLVMKPSVLQMLKAVLSEL 225
+EV + R T D IG F NS +R P + M++A L E
Sbjct: 139 --HIEVPEDMTRLTLDTIGLCGFNYRFNSF------YRDQP----HPFITSMVRA-LDEA 185
Query: 226 IPLIKYLNLK--IFDPRISQF------FSNLVKTNLSYREKNNIKRDDFLNIMMQLQIAQ 277
+ ++ N +D QF ++LV ++ R+ + + DD L M+ + +
Sbjct: 186 MNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPE 245
Query: 278 RGKTLSPDDVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMAT 337
G+ L D+ I Q F G+E +S +L+F LY L +NP + K +E A
Sbjct: 246 TGEPLD-------DENIRYQIITFLAAGHEATSGLLSFALYFLVKNPHVLQKAAEE-AAR 297
Query: 338 KKKEGELTYEICHKMSYLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKISI 397
+ +Y+ ++ Y+ V EALR++P+ P + K+ + + L+ G ++ +
Sbjct: 298 VLVDPVPSYKQVKQLKYVGMVLNEALRLWPTGPAFS-LYAKEDTVLGGEYPLEKGDELMV 356
Query: 398 PTFAIHYDPEYYPDP-EKFDPERFSPENIESRPHYTYLPFGDGPRNCIGK 446
+H D + D E+F PERF EN + P + + PFG+G R CIG+
Sbjct: 357 LIPQLHRDKTIWGDDVEEFRPERF--ENPSAIPQHAFKPFGNGQRACIGQ 404
>pdb|3HF2|A Chain A, Crystal Structure Of The I401p Mutant Of Cytochrome P450
Bm3
pdb|3HF2|B Chain B, Crystal Structure Of The I401p Mutant Of Cytochrome P450
Bm3
Length = 482
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 92/350 (26%), Positives = 157/350 (44%), Gaps = 36/350 (10%)
Query: 108 RDPIAGHLFLS--KGEYWKRLRNKLSPTFTSGKIKYMFPLIKKCSDQLITTIRKQIGESK 165
RD LF S + WK+ N L P+F+ +K ++ + QL+ + +
Sbjct: 80 RDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADE- 138
Query: 166 QMSLEVKDYCARYTTDVIGTTAFGIEINSLENPDSEFRQVSLLVMKPSVLQMLKAVLSEL 225
+EV + R T D IG F NS +R P + M++A L E
Sbjct: 139 --HIEVPEDMTRLTLDTIGLCGFNYRFNSF------YRDQP----HPFITSMVRA-LDEA 185
Query: 226 IPLIKYLNLK--IFDPRISQF------FSNLVKTNLSYREKNNIKRDDFLNIMMQLQIAQ 277
+ ++ N +D QF ++LV ++ R+ + + DD L M+ + +
Sbjct: 186 MNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPE 245
Query: 278 RGKTLSPDDVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMAT 337
G+ L D+ I Q F G+ET+S +L+F LY L +NP + K +E A
Sbjct: 246 TGEPLD-------DENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEE-AAR 297
Query: 338 KKKEGELTYEICHKMSYLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKISI 397
+ +Y+ ++ Y+ V EALR++P+ P + K+ + + L+ G ++ +
Sbjct: 298 VLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFS-LYAKEDTVLGGEYPLEKGDELMV 356
Query: 398 PTFAIHYDPEYYPDP-EKFDPERFSPENIESRPHYTYLPFGDGPRNCIGK 446
+H D + D E+F PERF EN + P + + PFG+G R C G+
Sbjct: 357 LIPQLHRDKTIWGDDVEEFRPERF--ENPSAIPQHAFKPFGNGQRACPGQ 404
>pdb|4DUA|A Chain A, Cytochrome P450 Bm3h-9d7 Mri Sensor, No Ligand
pdb|4DUA|B Chain B, Cytochrome P450 Bm3h-9d7 Mri Sensor, No Ligand
Length = 471
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 92/350 (26%), Positives = 157/350 (44%), Gaps = 36/350 (10%)
Query: 108 RDPIAGHLFLS--KGEYWKRLRNKLSPTFTSGKIKYMFPLIKKCSDQLITTIRKQIGESK 165
RD LF S + WK+ N L P+F+ +K ++ + QL+ + +
Sbjct: 79 RDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADE- 137
Query: 166 QMSLEVKDYCARYTTDVIGTTAFGIEINSLENPDSEFRQVSLLVMKPSVLQMLKAVLSEL 225
+EV + R T D IG F NS +R P + M++A L E
Sbjct: 138 --HIEVPEDMTRLTLDTIGLCGFNYRFNSF------YRDQP----HPFITSMVRA-LDEA 184
Query: 226 IPLIKYLNLK--IFDPRISQF------FSNLVKTNLSYREKNNIKRDDFLNIMMQLQIAQ 277
+ ++ N +D QF ++LV ++ R+ + + DD L M+ + +
Sbjct: 185 MNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPE 244
Query: 278 RGKTLSPDDVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMAT 337
G+ L D+ I Q F G+E +S +L+F LY L +NP + K +E A
Sbjct: 245 TGEPLD-------DENIRYQIITFLAAGHEATSGLLSFALYFLVKNPHVLQKAAEE-AAR 296
Query: 338 KKKEGELTYEICHKMSYLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKISI 397
+ +Y+ ++ Y+ V EALR++P+ P + K+ + + L+ G ++ +
Sbjct: 297 VLVDPVPSYKQVKQLKYVGMVLNEALRLWPTGPAFS-LYAKEDTVLGGEYPLEKGDELMV 355
Query: 398 PTFAIHYDPEYYPDP-EKFDPERFSPENIESRPHYTYLPFGDGPRNCIGK 446
+H D + D E+F PERF EN + P + + PFG+G R CIG+
Sbjct: 356 LIPQLHRDKTIWGDDVEEFRPERF--ENPSAIPQHAFKPFGNGQRACIGQ 403
>pdb|3KX4|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX4|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 92/350 (26%), Positives = 157/350 (44%), Gaps = 36/350 (10%)
Query: 108 RDPIAGHLFLS--KGEYWKRLRNKLSPTFTSGKIKYMFPLIKKCSDQLITTIRKQIGESK 165
RD LF S + WK+ N L P+F+ +K ++ + QL+ + +
Sbjct: 79 RDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADE- 137
Query: 166 QMSLEVKDYCARYTTDVIGTTAFGIEINSLENPDSEFRQVSLLVMKPSVLQMLKAVLSEL 225
+EV + R T D IG F NS +R P + M++A L E
Sbjct: 138 --HIEVPEDMTRLTLDTIGLCGFNYRFNSF------YRDQP----HPFITSMVRA-LDEA 184
Query: 226 IPLIKYLNLK--IFDPRISQF------FSNLVKTNLSYREKNNIKRDDFLNIMMQLQIAQ 277
+ ++ N +D QF ++LV ++ R+ + + DD L M+ + +
Sbjct: 185 MNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPE 244
Query: 278 RGKTLSPDDVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMAT 337
G+ L D+ I Q F G+ET+S +L+F LY L +NP + K +E A
Sbjct: 245 TGEPLD-------DENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEE-AAR 296
Query: 338 KKKEGELTYEICHKMSYLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKISI 397
+ +Y+ ++ Y+ V EALR++P+ P + K+ + + L+ G ++ +
Sbjct: 297 VLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFS-LYAKEDTVLGGEYPLEKGDELMV 355
Query: 398 PTFAIHYDPEYYPDP-EKFDPERFSPENIESRPHYTYLPFGDGPRNCIGK 446
+H D + D E+F PERF EN + P + + PFG+G R C G+
Sbjct: 356 LIPQLHRDKTIWGDDVEEFRPERF--ENPSAIPQHAFKPFGNGQRACEGQ 403
>pdb|2VE3|A Chain A, Retinoic Acid Bound Cyanobacterial Cyp120a1
pdb|2VE3|B Chain B, Retinoic Acid Bound Cyanobacterial Cyp120a1
pdb|2VE4|A Chain A, Substrate Free Cyanobacterial Cyp120a1
pdb|2VE4|B Chain B, Substrate Free Cyanobacterial Cyp120a1
Length = 444
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/194 (34%), Positives = 102/194 (52%), Gaps = 16/194 (8%)
Query: 256 REKNNIKRDDFLNIMMQLQIAQRGKTLSPDDV-EMTDDVITAQSFVFFFGGYETSSSVLT 314
R++ +D L I++ A R P + E+ D ++ + F G+ET +S L+
Sbjct: 214 RQQQPPSEEDALGILL----AARDDNNQPLSLPELKDQIL-----LLLFAGHETLTSALS 264
Query: 315 -FCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSYLDKVTKEALRMYPSLPQLD 373
FCL L ++ DI+ ++RQE + + ELT E KM YLD+V +E LR+ P +
Sbjct: 265 SFCLL-LGQHSDIRERVRQEQNKLQLSQ-ELTAETLKKMPYLDQVLQEVLRLIPPVGGGF 322
Query: 374 RISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPEYYPDPEKFDPERFSPENIESR-PHYT 432
R ++ + G +S H DP+ YPDPEKFDPERF+P+ + P +
Sbjct: 323 RELIQDCQF--QGFHFPKGWLVSYQISQTHADPDLYPDPEKFDPERFTPDGSATHNPPFA 380
Query: 433 YLPFGDGPRNCIGK 446
++PFG G R C+GK
Sbjct: 381 HVPFGGGLRECLGK 394
>pdb|3RUK|A Chain A, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|B Chain B, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|C Chain C, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|D Chain D, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3SWZ|A Chain A, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|B Chain B, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|C Chain C, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|D Chain D, Human Cytochrome P450 17a1 In Complex With Tok-001
Length = 494
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 105/390 (26%), Positives = 174/390 (44%), Gaps = 34/390 (8%)
Query: 77 LMVTDPELYKYILIKDFDHFVDR-GMGELDAKRDPIAGHLFLSKGEYW---KRLRNKLSP 132
++V +L K +LIK F R M LD + G F G +W +RL
Sbjct: 56 VIVGHHQLAKEVLIKKGKDFSGRPQMATLDIASNNRKGIAFADSGAHWQLHRRLAMATFA 115
Query: 133 TFTSGKIKYMFPLIKKCSDQLITTIRKQIGESKQMSLEVKDYCARYTTDVIGTTAFGIEI 192
F G K ++K Q I+T+ + S+++ T+VI F
Sbjct: 116 LFKDGDQK-----LEKIICQEISTLCDMLATHNGQSIDISFPVFVAVTNVISLICFN--- 167
Query: 193 NSLENPDSEFRQVSLLVMKPSVLQMLKAVLSELIPLIKYLNLKIFDP-----RISQFFSN 247
S +N D E + + + + K L +L+P +K K + +I N
Sbjct: 168 TSYKNGDPELNVIQNY-NEGIIDNLSKDSLVDLVPWLKIFPNKTLEKLKSHVKIRNDLLN 226
Query: 248 LVKTNLSYREKNNIKRD---DFLNIMMQLQIAQRGKTLSPD-DVEM-TDDVITAQSFVFF 302
+ N Y+EK + D + L+ +MQ ++ PD D E+ +D+ I F
Sbjct: 227 KILEN--YKEK--FRSDSITNMLDTLMQAKMNSDNGNAGPDQDSELLSDNHILTTIGDIF 282
Query: 303 FGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSYLDKVTKEA 362
G ET++SV+ + L L NP ++ KL +EI T +++ L+ +E
Sbjct: 283 GAGVETTTSVVKWTLAFLLHNPQVKKKLYEEIDQNVGFSRTPTISDRNRLLLLEATIREV 342
Query: 363 LRMYPSLPQL--DRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPEYYPDPEKFDPERF 420
LR+ P P L + +V + +D GT++ I +A+H++ + + P++F PERF
Sbjct: 343 LRLRPVAPMLIPHKANVDSSI---GEFAVDKGTEVIINLWALHHNEKEWHQPDQFMPERF 399
Query: 421 -SPENIE-SRPHYTYLPFGDGPRNCIGKIL 448
+P + P +YLPFG GPR+CIG+IL
Sbjct: 400 LNPAGTQLISPSVSYLPFGAGPRSCIGEIL 429
>pdb|3KX5|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX5|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 92/350 (26%), Positives = 157/350 (44%), Gaps = 36/350 (10%)
Query: 108 RDPIAGHLFLS--KGEYWKRLRNKLSPTFTSGKIKYMFPLIKKCSDQLITTIRKQIGESK 165
RD LF S + WK+ N L P+F+ +K ++ + QL+ + +
Sbjct: 79 RDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADE- 137
Query: 166 QMSLEVKDYCARYTTDVIGTTAFGIEINSLENPDSEFRQVSLLVMKPSVLQMLKAVLSEL 225
+EV + R T D IG F NS +R P + M++A L E
Sbjct: 138 --HIEVPEDMTRLTLDTIGLCGFNYRFNSF------YRDQP----HPFITSMVRA-LDEA 184
Query: 226 IPLIKYLNLK--IFDPRISQF------FSNLVKTNLSYREKNNIKRDDFLNIMMQLQIAQ 277
+ ++ N +D QF ++LV ++ R+ + + DD L M+ + +
Sbjct: 185 MNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPE 244
Query: 278 RGKTLSPDDVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMAT 337
G+ L D+ I Q G+ET+S +L+F LY L +NP + K +E A
Sbjct: 245 TGEPLD-------DENIRYQIITELIAGHETTSGLLSFALYFLVKNPHVLQKAAEE-AAR 296
Query: 338 KKKEGELTYEICHKMSYLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKISI 397
+ +Y+ ++ Y+ V EALR++P+ P + K+ + + L+ G ++ +
Sbjct: 297 VLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFS-LYAKEDTVLGGEYPLEKGDELMV 355
Query: 398 PTFAIHYDPEYYPDP-EKFDPERFSPENIESRPHYTYLPFGDGPRNCIGK 446
+H D + D E+F PERF EN + P + + PFG+G R CIG+
Sbjct: 356 LIPQLHRDKTIWGDDVEEFRPERF--ENPSAIPQHAFKPFGNGQRACIGQ 403
>pdb|4DTW|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Serotonin
pdb|4DTW|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Serotonin
pdb|4DTY|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor, No Ligand
pdb|4DTY|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor, No Ligand
pdb|4DTZ|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Dopamine
pdb|4DTZ|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Dopamine
Length = 469
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 92/350 (26%), Positives = 156/350 (44%), Gaps = 36/350 (10%)
Query: 108 RDPIAGHLFLS--KGEYWKRLRNKLSPTFTSGKIKYMFPLIKKCSDQLITTIRKQIGESK 165
RD LF S + WK+ N L P+F+ +K ++ + QL+ + +
Sbjct: 79 RDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADE- 137
Query: 166 QMSLEVKDYCARYTTDVIGTTAFGIEINSLENPDSEFRQVSLLVMKPSVLQMLKAVLSEL 225
+EV + R T D IG F NS +R P + M++A L E
Sbjct: 138 --HIEVPEDMTRLTLDTIGLCGFNYRFNSF------YRDQP----HPFITSMVRA-LDEA 184
Query: 226 IPLIKYLNLK--IFDPRISQF------FSNLVKTNLSYREKNNIKRDDFLNIMMQLQIAQ 277
+ ++ N +D QF ++LV ++ R+ + + DD L M+ + +
Sbjct: 185 MNKLRRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPE 244
Query: 278 RGKTLSPDDVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMAT 337
G+ L D+ I Q F G+E +S +L+F LY L +NP K +E A
Sbjct: 245 TGEPLD-------DENIRYQIITFLAAGHEATSGLLSFALYFLVKNPHELQKAAEE-AAR 296
Query: 338 KKKEGELTYEICHKMSYLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKISI 397
+ +Y+ ++ Y+ V EALR++P+ P + K+ + + L+ G ++ +
Sbjct: 297 VLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFS-LYAKEDTVLGGEYPLEKGDELMV 355
Query: 398 PTFAIHYDPEYYPDP-EKFDPERFSPENIESRPHYTYLPFGDGPRNCIGK 446
+H D + D E+F PERF EN + P + + PFG+G R CIG+
Sbjct: 356 LIPQLHRDKTIWGDDVEEFRPERF--ENPSAIPQHAFKPFGNGQRACIGQ 403
>pdb|4DU2|B Chain B, Cytochrome P450 Bm3h-B7 Mri Sensor Bound To Dopamine
pdb|4DU2|A Chain A, Cytochrome P450 Bm3h-B7 Mri Sensor Bound To Dopamine
Length = 470
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 91/350 (26%), Positives = 156/350 (44%), Gaps = 36/350 (10%)
Query: 108 RDPIAGHLFLS--KGEYWKRLRNKLSPTFTSGKIKYMFPLIKKCSDQLITTIRKQIGESK 165
RD LF S + WK+ N L P+F+ +K ++ + QL+ + +
Sbjct: 80 RDLAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADE- 138
Query: 166 QMSLEVKDYCARYTTDVIGTTAFGIEINSLENPDSEFRQVSLLVMKPSVLQMLKAVLSEL 225
+EV + R T D IG F NS +R P + M++A L E
Sbjct: 139 --HIEVPEDMTRLTLDTIGLCGFNYRFNSF------YRDQP----HPFITSMVRA-LDEA 185
Query: 226 IPLIKYLNLK--IFDPRISQF------FSNLVKTNLSYREKNNIKRDDFLNIMMQLQIAQ 277
+ ++ N +D QF ++LV ++ R+ + + DD L M+ + +
Sbjct: 186 MNKLRRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPE 245
Query: 278 RGKTLSPDDVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMAT 337
G+ L D+ I Q F G+E +S +L+F LY L +NP K +E A
Sbjct: 246 TGEPLD-------DENIRYQIITFLAAGHEATSGLLSFALYFLVKNPHELQKAAEE-AAR 297
Query: 338 KKKEGELTYEICHKMSYLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKISI 397
+ +++ ++ Y+ V EALR++P+ P + K+ + + L+ G ++ +
Sbjct: 298 VLVDPVPSHKQVKQLKYVGMVLNEALRLWPTAPAFS-LYAKEDTVLGGEYPLEKGDELMV 356
Query: 398 PTFAIHYDPEYYPDP-EKFDPERFSPENIESRPHYTYLPFGDGPRNCIGK 446
+H D + D E+F PERF EN + P + + PFG+G R CIG+
Sbjct: 357 LIPQLHRDKTVWGDDVEEFRPERF--ENPSAIPQHAFKPFGNGQRACIGQ 404
>pdb|4DVQ|A Chain A, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|B Chain B, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|C Chain C, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|D Chain D, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|E Chain E, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|F Chain F, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|G Chain G, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|H Chain H, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|I Chain I, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|J Chain J, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|K Chain K, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|L Chain L, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4FDH|A Chain A, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|B Chain B, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|C Chain C, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|D Chain D, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|E Chain E, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|F Chain F, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|G Chain G, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|H Chain H, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|I Chain I, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|J Chain J, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|K Chain K, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|L Chain L, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
Length = 483
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 83/346 (23%), Positives = 162/346 (46%), Gaps = 28/346 (8%)
Query: 113 GH---LFLSKGEYWKRLRNKLSPTFTSGK-IKYMFPLIKKCSDQLITTIRKQIGESKQ-- 166
GH +FL G W+ R +L+P S K ++ P++ + ++K++ ++ +
Sbjct: 98 GHKCGVFLLNGPEWRFNRLRLNPDVLSPKAVQRFLPMVDAVARDFSQALKKKVLQNARGS 157
Query: 167 MSLEVKDYCARYTTDVIGTTAFGIEINSL-ENPDSEFRQV--SLLVMKPSVLQML---KA 220
++L+V+ YT + FG + + +P S +L VM S +Q++ ++
Sbjct: 158 LTLDVQPSIFHYTIEASNLALFGERLGLVGHSPSSASLNFLHALEVMFKSTVQLMFMPRS 217
Query: 221 VLSELIPLIKYLNLKIFDPRISQFFSNLVKTNLSYREKNNIKRDDFLNIMMQLQIAQRGK 280
+ + P + + + +D I Q+ N ++ Y+E + + I+ +L +
Sbjct: 218 LSRWISPKVWKEHFEAWDC-IFQYGDNCIQK--IYQELAFNRPQHYTGIVAELLL----- 269
Query: 281 TLSPDDVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKK 340
E++ + I A S G +T++ L L+ELARNPD+Q LRQE +A
Sbjct: 270 -----KAELSLEAIKANSMELTAGSVDTTAFPLLMTLFELARNPDVQQILRQESLAAAAS 324
Query: 341 EGELTYEICHKMSYLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKISIPTF 400
E + ++ L KE LR+YP L+R+ L N + GT + + +
Sbjct: 325 ISEHPQKATTELPLLRAALKETLRLYPVGLFLERVVSSDLVLQNYH--IPAGTLVQVFLY 382
Query: 401 AIHYDPEYYPDPEKFDPERFSPENIESRPHYTYLPFGDGPRNCIGK 446
++ + +P PE+++P+R+ R ++ ++PFG G R C+G+
Sbjct: 383 SLGRNAALFPRPERYNPQRWLDIRGSGR-NFHHVPFGFGMRQCLGR 427
>pdb|3MZS|A Chain A, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|B Chain B, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|C Chain C, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|D Chain D, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
Length = 486
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 88/347 (25%), Positives = 163/347 (46%), Gaps = 33/347 (9%)
Query: 113 GHLFLSKGEYWKRLRNKLSPTFTSGK-IKYMFPLIKKCSDQLITTIRKQIGE--SKQMSL 169
G LF G WK+ R L+ + + IK PL+ S ++ + K+I + S +
Sbjct: 100 GVLFKKSGT-WKKDRVVLNTEVMAPEAIKNFIPLLNPVSQDFVSLLHKRIKQQGSGKFVG 158
Query: 170 EVKDYCARYTTDVIGTTAFGIEINSLE---NPDSEFRQVSLLVMKPSVLQMLKAVLSELI 226
++K+ + + I FG + LE NP+++ ++ M + + +L V EL
Sbjct: 159 DIKEDLFHFAFESITNVMFGERLGMLEETVNPEAQKFIDAVYKMFHTSVPLLN-VPPELY 217
Query: 227 PLIKYLNLKIFDPRISQFFSNLVK-TNLSYREKNNIKRDDFLNIMMQLQIAQRGKTLSPD 285
L + + F+ K T + Y++ ++ +F N L + + + +
Sbjct: 218 RLFRTKTWRDHVAAWDTIFNKAEKYTEIFYQDLR--RKTEFRNYPGILYCLLKSEKMLLE 275
Query: 286 DVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIM-ATKKKEGEL 344
DV+ + A GG T+S L + LYE+AR+ ++Q LR+E++ A ++ EG++
Sbjct: 276 DVKANITEMLA-------GGVNTTSMTLQWHLYEMARSLNVQEMLREEVLNARRQAEGDI 328
Query: 345 TYEICHKMSYLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLTLD-----VGTKISIPT 399
+ ++ + L KE LR++P ISV + P +DL L T + +
Sbjct: 329 S-KMLQMVPLLKASIKETLRLHP-------ISVTLQRYPESDLVLQDYLIPAKTLVQVAI 380
Query: 400 FAIHYDPEYYPDPEKFDPERFSPENIESRPHYTYLPFGDGPRNCIGK 446
+A+ DP ++ P+KFDP R+ ++ + H+ L FG G R C+G+
Sbjct: 381 YAMGRDPAFFSSPDKFDPTRWLSKD-KDLIHFRNLGFGWGVRQCVGR 426
>pdb|3NA0|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 20,22-
Dihydroxycholesterol
pdb|3NA0|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 20,22-
Dihydroxycholesterol
Length = 471
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 85/346 (24%), Positives = 154/346 (44%), Gaps = 33/346 (9%)
Query: 115 LFLSKGEYWKRLRNKLSPTFTSGK-IKYMFPLIKKCSDQLITTIRKQI--GESKQMSLEV 171
+ L K WK+ R L+ + + K PL+ S ++ + ++I S S ++
Sbjct: 96 VLLKKSAAWKKDRVALNQEVMAPEATKNFLPLLDAVSRDFVSVLHRRIKKAGSGNYSGDI 155
Query: 172 KDYCARYTTDVIGTTAFGIEINSLE---NPDSEFRQVSLLVMKPSVLQMLKAVLSELIP- 227
D R+ + I FG LE NP+++ ++ M + + ML L P
Sbjct: 156 SDDLFRFAFESITNVIFGERQGMLEEVVNPEAQRFIDAIYQMFHTSVPMLN-----LPPD 210
Query: 228 LIKYLNLKIFDPRISQF---FS--NLVKTNLSY--REKNNIKRDDFLNIMMQLQIAQRGK 280
L + K + ++ + FS ++ N + R+K ++ D + I+ +L
Sbjct: 211 LFRLFRTKTWKDHVAAWDVIFSKADIYTQNFYWELRQKGSVHHD-YRGILYRLL------ 263
Query: 281 TLSPDDVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKK 340
D +M+ + I A GG +T+S L + LYE+ARN +Q LR E++A + +
Sbjct: 264 ----GDSKMSFEDIKANVTEMLAGGVDTTSMTLQWHLYEMARNLKVQDMLRAEVLAARHQ 319
Query: 341 EGELTYEICHKMSYLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKISIPTF 400
+ + L KE LR++P L R V L D + T + + +
Sbjct: 320 AQGDMATMLQLVPLLKASIKETLRLHPISVTLQRYLVNDLVL--RDYMIPAKTLVQVAIY 377
Query: 401 AIHYDPEYYPDPEKFDPERFSPENIESRPHYTYLPFGDGPRNCIGK 446
A+ +P ++ DPE FDP R+ ++ ++ ++ L FG G R C+G+
Sbjct: 378 ALGREPTFFFDPENFDPTRWLSKD-KNITYFRNLGFGWGVRQCLGR 422
>pdb|3N9Y|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With
Cholesterol
pdb|3N9Y|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With
Cholesterol
pdb|3N9Z|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 22-
Hydroxycholesterol
pdb|3N9Z|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 22-
Hydroxycholesterol
pdb|3NA1|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 20-
Hydroxycholesterol
pdb|3NA1|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 20-
Hydroxycholesterol
Length = 487
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 85/346 (24%), Positives = 154/346 (44%), Gaps = 33/346 (9%)
Query: 115 LFLSKGEYWKRLRNKLSPTFTSGK-IKYMFPLIKKCSDQLITTIRKQI--GESKQMSLEV 171
+ L K WK+ R L+ + + K PL+ S ++ + ++I S S ++
Sbjct: 99 VLLKKSAAWKKDRVALNQEVMAPEATKNFLPLLDAVSRDFVSVLHRRIKKAGSGNYSGDI 158
Query: 172 KDYCARYTTDVIGTTAFGIEINSLE---NPDSEFRQVSLLVMKPSVLQMLKAVLSELIP- 227
D R+ + I FG LE NP+++ ++ M + + ML L P
Sbjct: 159 SDDLFRFAFESITNVIFGERQGMLEEVVNPEAQRFIDAIYQMFHTSVPMLN-----LPPD 213
Query: 228 LIKYLNLKIFDPRISQF---FS--NLVKTNLSY--REKNNIKRDDFLNIMMQLQIAQRGK 280
L + K + ++ + FS ++ N + R+K ++ D + I+ +L
Sbjct: 214 LFRLFRTKTWKDHVAAWDVIFSKADIYTQNFYWELRQKGSVHHD-YRGILYRLL------ 266
Query: 281 TLSPDDVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKK 340
D +M+ + I A GG +T+S L + LYE+ARN +Q LR E++A + +
Sbjct: 267 ----GDSKMSFEDIKANVTEMLAGGVDTTSMTLQWHLYEMARNLKVQDMLRAEVLAARHQ 322
Query: 341 EGELTYEICHKMSYLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKISIPTF 400
+ + L KE LR++P L R V L D + T + + +
Sbjct: 323 AQGDMATMLQLVPLLKASIKETLRLHPISVTLQRYLVNDLVL--RDYMIPAKTLVQVAIY 380
Query: 401 AIHYDPEYYPDPEKFDPERFSPENIESRPHYTYLPFGDGPRNCIGK 446
A+ +P ++ DPE FDP R+ ++ ++ ++ L FG G R C+G+
Sbjct: 381 ALGREPTFFFDPENFDPTRWLSKD-KNITYFRNLGFGWGVRQCLGR 425
>pdb|2PG6|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
Length = 476
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 80/344 (23%), Positives = 150/344 (43%), Gaps = 29/344 (8%)
Query: 117 LSKGEYWKRLRNKLSPT---FTSGKIKYMFPLIKKCSDQLITTIRKQIGESKQMSLEVKD 173
S GE K+LR T F GK + + I++ + LI +R G +++
Sbjct: 96 FSNGERAKQLRRFSIATLRDFGVGK-RGIEERIQEEAGFLIDALRGTGG----ANIDPTF 150
Query: 174 YCARYTTDVIGTTAFGIEINSLENPDSEFRQVSLLVMKPSVLQMLKAVLSELIPLIKYLN 233
+ +R ++VI + FG + + D EF +SLL M + Q +L + +
Sbjct: 151 FLSRTVSNVISSIVFG---DRFDYKDKEF--LSLLRMMLGIFQFTSTSTGQLYEMFSSVM 205
Query: 234 LKIFDPRISQF-----FSNLVKTNLSYREKN---NIKRDDFLNIMMQLQIAQRGKTLSPD 285
+ P+ F + + + + ++ N RD + ++++Q ++
Sbjct: 206 KHLPGPQQQAFQCLQGLEDFIAKKVEHNQRTLDPNSPRDFIDSFLIRMQEEEKNP----- 260
Query: 286 DVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELT 345
+ E + + F GG ET S+ L + L ++P++++K+ +EI K +
Sbjct: 261 NTEFYLKNLVMTTLQLFIGGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPK 320
Query: 346 YEICHKMSYLDKVTKEALRMYPSLP-QLDRISVKKYKLPNTDLTLDVGTKISIPTFAIHY 404
+E KM Y++ V E R +P L R K K D L GT++ ++
Sbjct: 321 FEDRAKMPYMEAVIHEIQRFGDVIPMSLARRVKKDTKF--RDFFLPKGTEVYPMLGSVLR 378
Query: 405 DPEYYPDPEKFDPERFSPENIESRPHYTYLPFGDGPRNCIGKIL 448
DP ++ +P+ F+P+ F E + + ++PF G RNC G+ L
Sbjct: 379 DPSFFSNPQDFNPQHFLNEKGQFKKSDAFVPFSIGKRNCFGEGL 422
>pdb|2PG5|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297q
Length = 476
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 80/344 (23%), Positives = 150/344 (43%), Gaps = 29/344 (8%)
Query: 117 LSKGEYWKRLRNKLSPT---FTSGKIKYMFPLIKKCSDQLITTIRKQIGESKQMSLEVKD 173
S GE K+LR T F GK + + I++ + LI +R G +++
Sbjct: 96 FSNGERAKQLRRFSIATLRDFGVGK-RGIEERIQEEAGFLIDALRGTGG----ANIDPTF 150
Query: 174 YCARYTTDVIGTTAFGIEINSLENPDSEFRQVSLLVMKPSVLQMLKAVLSELIPLIKYLN 233
+ +R ++VI + FG + + D EF +SLL M + Q +L + +
Sbjct: 151 FLSRTVSNVISSIVFG---DRFDYKDKEF--LSLLRMMLGIFQFTSTSTGQLYEMFSSVM 205
Query: 234 LKIFDPRISQF-----FSNLVKTNLSYREKN---NIKRDDFLNIMMQLQIAQRGKTLSPD 285
+ P+ F + + + + ++ N RD + ++++Q ++
Sbjct: 206 KHLPGPQQQAFQLLQGLEDFIAKKVEHNQRTLDPNSPRDFIDSFLIRMQEEEKNP----- 260
Query: 286 DVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELT 345
+ E + + F GG ET S+ L + L ++P++++K+ +EI K +
Sbjct: 261 NTEFYLKNLVMTTLQLFIGGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPK 320
Query: 346 YEICHKMSYLDKVTKEALRMYPSLP-QLDRISVKKYKLPNTDLTLDVGTKISIPTFAIHY 404
+E KM Y++ V E R +P L R K K D L GT++ ++
Sbjct: 321 FEDRAKMPYMEAVIHEIQRFGDVIPMSLARRVKKDTKF--RDFFLPKGTEVYPMLGSVLR 378
Query: 405 DPEYYPDPEKFDPERFSPENIESRPHYTYLPFGDGPRNCIGKIL 448
DP ++ +P+ F+P+ F E + + ++PF G RNC G+ L
Sbjct: 379 DPSFFSNPQDFNPQHFLNEKGQFKKSDAFVPFSIGKRNCFGEGL 422
>pdb|2PG7|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
Length = 476
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 80/344 (23%), Positives = 150/344 (43%), Gaps = 29/344 (8%)
Query: 117 LSKGEYWKRLRNKLSPT---FTSGKIKYMFPLIKKCSDQLITTIRKQIGESKQMSLEVKD 173
S GE K+LR T F GK + + I++ + LI +R G +++
Sbjct: 96 FSNGERAKQLRRFSIATLRDFGVGK-RGIEERIQEEAGFLIDALRGTGG----ANIDPTF 150
Query: 174 YCARYTTDVIGTTAFGIEINSLENPDSEFRQVSLLVMKPSVLQMLKAVLSELIPLIKYLN 233
+ +R ++VI + FG + + D EF +SLL M + Q +L + +
Sbjct: 151 FLSRTVSNVISSIVFG---DRFDYKDKEF--LSLLRMMLGIFQFTSTSTGQLYEMFSSVM 205
Query: 234 LKIFDPRISQF-----FSNLVKTNLSYREKN---NIKRDDFLNIMMQLQIAQRGKTLSPD 285
+ P+ F + + + + ++ N RD + ++++Q ++
Sbjct: 206 KHLPGPQQQAFQLLQGLEDFIAKKVEHNQRTLDPNSPRDFIDSFLIRMQEEEKNP----- 260
Query: 286 DVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELT 345
+ E + + F GG ET S+ L + L ++P++++K+ +EI K +
Sbjct: 261 NTEFYLKNLVMTTLQLFVGGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPK 320
Query: 346 YEICHKMSYLDKVTKEALRMYPSLP-QLDRISVKKYKLPNTDLTLDVGTKISIPTFAIHY 404
+E KM Y++ V E R +P L R K K D L GT++ ++
Sbjct: 321 FEDRAKMPYMEAVIHEIQRFGDVIPMSLARRVKKDTKF--RDFFLPKGTEVYPMLGSVLR 378
Query: 405 DPEYYPDPEKFDPERFSPENIESRPHYTYLPFGDGPRNCIGKIL 448
DP ++ +P+ F+P+ F E + + ++PF G RNC G+ L
Sbjct: 379 DPSFFSNPQDFNPQHFLNEKGQFKKSDAFVPFSIGKRNCFGEGL 422
>pdb|1Z10|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z11|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|2FDU|A Chain A, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|B Chain B, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|C Chain C, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|D Chain D, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|A Chain A, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|B Chain B, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|C Chain C, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|D Chain D, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDY|A Chain A, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|B Chain B, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|C Chain C, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|D Chain D, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|3T3R|A Chain A, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|B Chain B, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|C Chain C, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|D Chain D, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|4EJJ|A Chain A, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|B Chain B, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|C Chain C, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|D Chain D, Human Cytochrome P450 2a6 In Complex With Nicotine
Length = 476
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 80/344 (23%), Positives = 150/344 (43%), Gaps = 29/344 (8%)
Query: 117 LSKGEYWKRLRNKLSPT---FTSGKIKYMFPLIKKCSDQLITTIRKQIGESKQMSLEVKD 173
S GE K+LR T F GK + + I++ + LI +R G +++
Sbjct: 96 FSNGERAKQLRRFSIATLRDFGVGK-RGIEERIQEEAGFLIDALRGTGG----ANIDPTF 150
Query: 174 YCARYTTDVIGTTAFGIEINSLENPDSEFRQVSLLVMKPSVLQMLKAVLSELIPLIKYLN 233
+ +R ++VI + FG + + D EF +SLL M + Q +L + +
Sbjct: 151 FLSRTVSNVISSIVFG---DRFDYKDKEF--LSLLRMMLGIFQFTSTSTGQLYEMFSSVM 205
Query: 234 LKIFDPRISQF-----FSNLVKTNLSYREKN---NIKRDDFLNIMMQLQIAQRGKTLSPD 285
+ P+ F + + + + ++ N RD + ++++Q ++
Sbjct: 206 KHLPGPQQQAFQLLQGLEDFIAKKVEHNQRTLDPNSPRDFIDSFLIRMQEEEKNP----- 260
Query: 286 DVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELT 345
+ E + + F GG ET S+ L + L ++P++++K+ +EI K +
Sbjct: 261 NTEFYLKNLVMTTLNLFIGGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPK 320
Query: 346 YEICHKMSYLDKVTKEALRMYPSLP-QLDRISVKKYKLPNTDLTLDVGTKISIPTFAIHY 404
+E KM Y++ V E R +P L R K K D L GT++ ++
Sbjct: 321 FEDRAKMPYMEAVIHEIQRFGDVIPMSLARRVKKDTKF--RDFFLPKGTEVYPMLGSVLR 378
Query: 405 DPEYYPDPEKFDPERFSPENIESRPHYTYLPFGDGPRNCIGKIL 448
DP ++ +P+ F+P+ F E + + ++PF G RNC G+ L
Sbjct: 379 DPSFFSNPQDFNPQHFLNEKGQFKKSDAFVPFSIGKRNCFGEGL 422
>pdb|3DBG|A Chain A, Crystal Structure Of Cytochrome P450 170a1 (Cyp170a1) From
Streptomyces Coelicolor
pdb|3DBG|B Chain B, Crystal Structure Of Cytochrome P450 170a1 (Cyp170a1) From
Streptomyces Coelicolor
pdb|3EL3|A Chain A, Distinct Monooxygenase And Farnesene Synthase Active Sites
In Cytochrome P450 170a1
pdb|3EL3|B Chain B, Distinct Monooxygenase And Farnesene Synthase Active Sites
In Cytochrome P450 170a1
Length = 467
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 91/196 (46%), Gaps = 11/196 (5%)
Query: 248 LVKTNLSYREKNNIKRDDFLNIMMQLQIAQRGKTLSPDDVEMTDDVITAQSFVFFFGGYE 307
LV ++ R + K DD L +++ + G + + E+ D V+ G E
Sbjct: 226 LVDEIIAERRASGQKPDDLLTALLEAK-DDNGDPIG--EQEIHDQVVA-----ILTPGSE 277
Query: 308 TSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSYLDKVTKEALRMYP 367
T +S + + L LA +P+ ++R E+ A + +E K+ + V EA+R+ P
Sbjct: 278 TIASTIMWLLQALADHPEHADRIRDEVEAVTGGR-PVAFEDVRKLRHTGNVIVEAMRLRP 336
Query: 368 SLPQLDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPEYYPDPEKFDPERFSPENIES 427
++ L R +V + +L + G I +AI DP+ Y D +FDP+R+ PE +
Sbjct: 337 AVWVLTRRAVAESEL--GGYRIPAGADIIYSPYAIQRDPKSYDDNLEFDPDRWLPERAAN 394
Query: 428 RPHYTYLPFGDGPRNC 443
P Y PF G R C
Sbjct: 395 VPKYAMKPFSAGKRKC 410
>pdb|3K9V|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9V|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9Y|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
pdb|3K9Y|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
Length = 482
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 76/151 (50%), Gaps = 13/151 (8%)
Query: 303 FGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSYLDKVTKEA 362
ET+++ L + LY L+RNP Q +L QE+ + E M YL KE+
Sbjct: 293 LAAVETTANSLMWILYNLSRNPQAQRRLLQEVQSVLPDNQTPRAEDLRNMPYLKACLKES 352
Query: 363 LRMYPSLP----QLDRISV-KKYKLPNTDLTLDVGTKISIPTFAIHYDPEYYPDPEKFDP 417
+R+ PS+P LD+ +V +Y LP GT +++ T + + + D KF P
Sbjct: 353 MRLTPSVPFTTRTLDKPTVLGEYALPK-------GTVLTLNTQVLGSSEDNFEDSHKFRP 405
Query: 418 ERFSPENIESRPHYTYLPFGDGPRNCIGKIL 448
ER+ + + P + +LPFG G R CIG+ L
Sbjct: 406 ERWLQKEKKINP-FAHLPFGIGKRMCIGRRL 435
>pdb|3EBS|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3T3Q|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
Length = 476
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/344 (23%), Positives = 149/344 (43%), Gaps = 29/344 (8%)
Query: 117 LSKGEYWKRLRNKLSPT---FTSGKIKYMFPLIKKCSDQLITTIRKQIGESKQMSLEVKD 173
S GE K+LR T F GK + + I++ + LI +R G +++
Sbjct: 96 FSNGERAKQLRRFSIATLRDFGVGK-RGIEERIQEEAGFLIDALRGTGG----ANIDPTF 150
Query: 174 YCARYTTDVIGTTAFGIEINSLENPDSEFRQVSLLVMKPSVLQMLKAVLSELIPLIKYLN 233
+ +R ++VI + FG + + D EF +SLL M Q +L + +
Sbjct: 151 FLSRTVSNVISSIVFG---DRFDYKDKEF--LSLLRMMLGSFQFTSTSTGQLYEMFSSVM 205
Query: 234 LKIFDPRISQF-----FSNLVKTNLSYREKN---NIKRDDFLNIMMQLQIAQRGKTLSPD 285
+ P+ F + + + + ++ N RD + ++++Q ++
Sbjct: 206 KHLPGPQQQAFQLLQGLEDFIAKKVEHNQRTLDPNSPRDFIDSFLIRMQEEEKNP----- 260
Query: 286 DVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELT 345
+ E + + FF G ET S+ L + L ++P++++K+ +EI K +
Sbjct: 261 NTEFYLKNLVMTTLNLFFAGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPK 320
Query: 346 YEICHKMSYLDKVTKEALRMYPSLPQ-LDRISVKKYKLPNTDLTLDVGTKISIPTFAIHY 404
+E KM Y++ V E R +P L R K K D L GT++ ++
Sbjct: 321 FEDRAKMPYMEAVIHEIQRFGDVIPMGLARRVKKDTKF--RDFFLPKGTEVYPMLGSVLR 378
Query: 405 DPEYYPDPEKFDPERFSPENIESRPHYTYLPFGDGPRNCIGKIL 448
DP ++ +P+ F+P+ F E + + ++PF G RNC G+ L
Sbjct: 379 DPSFFSNPQDFNPQHFLNEKGQFKKSDAFVPFSIGKRNCFGEGL 422
>pdb|2W0A|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor
N-[(1s)-2-Methyl-1-(Pyridin-4-Ylcarbamoyl)propyl]
Cyclohexanecarboxamide
Length = 455
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 84/177 (47%), Gaps = 6/177 (3%)
Query: 270 MMQLQIAQRGKTLSPDDVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSK 329
M+ + IA + +T +P + D IT F G+ TSS ++ L EL R+ D +
Sbjct: 225 MLDVLIAVKAETGTP---RFSADEITGMFISMMFAGHHTSSGTASWTLIELMRHRDAYAA 281
Query: 330 LRQEIMATKKKEGELTYEICHKMSYLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLTL 389
+ E+ +++ ++ L+ V KE LR++P L L R++ ++++ +
Sbjct: 282 VIDELDELYGDGRSVSFHALRQIPQLENVLKETLRLHPPLIILMRVAKGEFEVQGH--RI 339
Query: 390 DVGTKISIPTFAIHYDPEYYPDPEKFDPERF-SPENIESRPHYTYLPFGDGPRNCIG 445
G ++ + PE +PDP F P R+ P + +T++PFG G C+G
Sbjct: 340 HEGDLVAASPAISNRIPEDFPDPHDFVPARYEQPRQEDLLNRWTWIPFGAGRHRCVG 396
>pdb|1U13|A Chain A, Crystal Structure Analysis Of The C37lC151TC442A-Triple
Mutant Of Cyp51 From Mycobacterium Tuberculosis
Length = 455
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 84/177 (47%), Gaps = 6/177 (3%)
Query: 270 MMQLQIAQRGKTLSPDDVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSK 329
M+ + IA + +T +P + D IT F G+ TSS ++ L EL R+ D +
Sbjct: 225 MLDVLIAVKAETGTP---RFSADEITGMFISMMFAGHHTSSGTASWTLIELMRHRDAYAA 281
Query: 330 LRQEIMATKKKEGELTYEICHKMSYLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLTL 389
+ E+ +++ ++ L+ V KE LR++P L L R++ ++++ +
Sbjct: 282 VIDELDELYGDGRSVSFHALRQIPQLENVLKETLRLHPPLIILMRVAKGEFEVQGH--RI 339
Query: 390 DVGTKISIPTFAIHYDPEYYPDPEKFDPERF-SPENIESRPHYTYLPFGDGPRNCIG 445
G ++ + PE +PDP F P R+ P + +T++PFG G C+G
Sbjct: 340 HEGDLVAASPAISNRIPEDFPDPHDFVPARYEQPRQEDLLNRWTWIPFGAGRHRCVG 396
>pdb|1X8V|A Chain A, Estriol-Bound And Ligand-Free Structures Of Sterol
14alpha- Demethylase (Cyp51)
pdb|2BZ9|A Chain A, Ligand-Free Structure Of Sterol 14alpha-Demethylase From
Mycobacterium Tuberculosis In P2(1) Space Group
pdb|2BZ9|B Chain B, Ligand-Free Structure Of Sterol 14alpha-Demethylase From
Mycobacterium Tuberculosis In P2(1) Space Group
pdb|2CI0|A Chain A, High Throughput Screening And X-Ray Crystallography
Assisted Evaluation Of Small Molecule Scaffolds For
Cyp51 Inhibitors
pdb|2CIB|A Chain A, High Throughput Screening And X-Ray Crystallography
Assisted Evaluation Of Small Molecule Scaffolds For
Cyp51 Inhibitors
pdb|2VKU|A Chain A, 4,4'-Dihydroxybenzophenone Mimics Sterol Substrate In The
Binding Site Of Sterol 14alpha-Demethylase (Cyp51) In
The X-Ray Structure Of The Complex
pdb|2W09|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor Cis-4-
Methyl-N-[(1s)-3-(Methylsulfanyl)-1-(Pyridin-4-
Ylcarbamoyl)propyl]cyclohexanecarboxamide
pdb|2W0B|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor 3-{[(4-
Methylphenyl)sulfonyl]amino}propyl Pyridin-4-Ylcarbamate
Length = 455
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 84/177 (47%), Gaps = 6/177 (3%)
Query: 270 MMQLQIAQRGKTLSPDDVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSK 329
M+ + IA + +T +P + D IT F G+ TSS ++ L EL R+ D +
Sbjct: 225 MLDVLIAVKAETGTP---RFSADEITGMFISMMFAGHHTSSGTASWTLIELMRHRDAYAA 281
Query: 330 LRQEIMATKKKEGELTYEICHKMSYLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLTL 389
+ E+ +++ ++ L+ V KE LR++P L L R++ ++++ +
Sbjct: 282 VIDELDELYGDGRSVSFHALRQIPQLENVLKETLRLHPPLIILMRVAKGEFEVQGH--RI 339
Query: 390 DVGTKISIPTFAIHYDPEYYPDPEKFDPERF-SPENIESRPHYTYLPFGDGPRNCIG 445
G ++ + PE +PDP F P R+ P + +T++PFG G C+G
Sbjct: 340 HEGDLVAASPAISNRIPEDFPDPHDFVPARYEQPRQEDLLNRWTWIPFGAGRHRCVG 396
>pdb|1EA1|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Complex With Fluconazole
pdb|1E9X|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Complex With 4-
Phenylimidazole
pdb|1H5Z|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Ferric Low-Spin State
Length = 455
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 84/177 (47%), Gaps = 6/177 (3%)
Query: 270 MMQLQIAQRGKTLSPDDVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSK 329
M+ + IA + +T +P + D IT F G+ TSS ++ L EL R+ D +
Sbjct: 225 MLDVLIAVKAETGTP---RFSADEITGMFISMMFAGHHTSSGTASWTLIELMRHRDAYAA 281
Query: 330 LRQEIMATKKKEGELTYEICHKMSYLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLTL 389
+ E+ +++ ++ L+ V KE LR++P L L R++ ++++ +
Sbjct: 282 VIDELDELYGDGRSVSFHALRQIPQLENVLKETLRLHPPLIILMRVAKGEFEVQGH--RI 339
Query: 390 DVGTKISIPTFAIHYDPEYYPDPEKFDPERF-SPENIESRPHYTYLPFGDGPRNCIG 445
G ++ + PE +PDP F P R+ P + +T++PFG G C+G
Sbjct: 340 HEGDLVAASPAISNRIPEDFPDPHDFVPARYEQPRQEDLLNRWTWIPFGAGRHRCVG 396
>pdb|3CZH|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
pdb|3CZH|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
Length = 481
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 75/151 (49%), Gaps = 13/151 (8%)
Query: 304 GGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSYLDKVTKEAL 363
G ET+++VL + + +A P+IQ ++++EI G+ +++ KM Y + V E L
Sbjct: 284 AGTETTTNVLRWAILFMALYPNIQGQVQKEIDLIMGPNGKPSWDDKCKMPYTEAVLHEVL 343
Query: 364 RMYPSLP------QLDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPEYYPDPEKFDP 417
R +P + V+ Y +P GT + +++H+D +Y+ DPE F P
Sbjct: 344 RFCNIVPLGIFHATSEDAVVRGYSIPK-------GTTVITNLYSVHFDEKYWRDPEVFHP 396
Query: 418 ERFSPENIESRPHYTYLPFGDGPRNCIGKIL 448
ERF + +PF G R+C+G+ L
Sbjct: 397 ERFLDSSGYFAKKEALVPFSLGRRHCLGEHL 427
>pdb|3C6G|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3C6G|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3DL9|A Chain A, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
pdb|3DL9|B Chain B, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
Length = 479
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 75/151 (49%), Gaps = 13/151 (8%)
Query: 304 GGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSYLDKVTKEAL 363
G ET+++VL + + +A P+IQ ++++EI G+ +++ KM Y + V E L
Sbjct: 284 AGTETTTNVLRWAILFMALYPNIQGQVQKEIDLIMGPNGKPSWDDKCKMPYTEAVLHEVL 343
Query: 364 RMYPSLP------QLDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPEYYPDPEKFDP 417
R +P + V+ Y +P GT + +++H+D +Y+ DPE F P
Sbjct: 344 RFCNIVPLGIFHATSEDAVVRGYSIPK-------GTTVITNLYSVHFDEKYWRDPEVFHP 396
Query: 418 ERFSPENIESRPHYTYLPFGDGPRNCIGKIL 448
ERF + +PF G R+C+G+ L
Sbjct: 397 ERFLDSSGYFAKKEALVPFSLGRRHCLGEHL 427
>pdb|2P85|A Chain A, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|B Chain B, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|C Chain C, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|D Chain D, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|E Chain E, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|F Chain F, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|3T3S|A Chain A, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|B Chain B, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|C Chain C, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|D Chain D, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|E Chain E, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|F Chain F, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|G Chain G, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|H Chain H, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|4EJG|A Chain A, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|B Chain B, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|C Chain C, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|D Chain D, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|E Chain E, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|F Chain F, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|G Chain G, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|H Chain H, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJH|A Chain A, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|B Chain B, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|C Chain C, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|D Chain D, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|E Chain E, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|F Chain F, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|G Chain G, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|H Chain H, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJI|A Chain A, Human Cytochrome P450 2a13 In Complex With Two Molecules
Of 4- (Methylnitrosamino)-1-(3-Puridyl)-1-Butanone
Length = 476
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 77/343 (22%), Positives = 144/343 (41%), Gaps = 27/343 (7%)
Query: 117 LSKGEYWKRLRNKLSPT---FTSGKIKYMFPLIKKCSDQLITTIRKQIGESKQMSLEVKD 173
S GE K+LR T F GK + + I++ + LI +R G +++
Sbjct: 96 FSNGERAKQLRRFSIATLRGFGVGK-RGIEERIQEEAGFLIDALRGTHG----ANIDPTF 150
Query: 174 YCARYTTDVIGTTAFGIEINSLENPDSEFRQVSLLVMKPSVLQMLKAVLSELIPLIKYLN 233
+ +R ++VI + FG + + D EF +SLL M Q +L + +
Sbjct: 151 FLSRTVSNVISSIVFG---DRFDYEDKEF--LSLLRMMLGSFQFTATSTGQLYEMFSSVM 205
Query: 234 LKIFDPRISQF-----FSNLVKTNLSYREKN---NIKRDDFLNIMMQLQIAQRGKTLSPD 285
+ P+ F + + + + ++ N RD + ++++Q ++
Sbjct: 206 KHLPGPQQQAFKELQGLEDFIAKKVEHNQRTLDPNSPRDFIDSFLIRMQEEEKNP----- 260
Query: 286 DVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELT 345
+ E + + FF G ET S+ L + L ++P++++K+ +EI K +
Sbjct: 261 NTEFYLKNLVMTTLNLFFAGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPK 320
Query: 346 YEICHKMSYLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYD 405
+E KM Y + V E R LP V K D L GT++ ++ D
Sbjct: 321 FEDRAKMPYTEAVIHEIQRFGDMLPMGLAHRVNK-DTKFRDFFLPKGTEVFPMLGSVLRD 379
Query: 406 PEYYPDPEKFDPERFSPENIESRPHYTYLPFGDGPRNCIGKIL 448
P ++ +P F+P+ F + + + ++PF G R C G+ L
Sbjct: 380 PRFFSNPRDFNPQHFLDKKGQFKKSDAFVPFSIGKRYCFGEGL 422
>pdb|3E4E|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E4E|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E6I|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3E6I|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3GPH|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3GPH|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3KOH|A Chain A, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3KOH|B Chain B, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3LC4|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3LC4|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3T3Z|A Chain A, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|B Chain B, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|C Chain C, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|D Chain D, Human Cytochrome P450 2e1 In Complex With Pilocarpine
Length = 476
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 79/166 (47%), Gaps = 15/166 (9%)
Query: 290 TDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEIC 349
T D IT FF G ET+S+ L + L L + P+I+ KL +EI +
Sbjct: 264 TMDGITVTVADLFFAGTETTSTTLRYGLLILMKYPEIEEKLHEEIDRVIGPSRIPAIKDR 323
Query: 350 HKMSYLDKVTKEALRMYPSLP-----QLDRISV-KKYKLPNTDLTLDVGTKISIPTF-AI 402
+M Y+D V E R +P + R ++ + Y +P GT + +PT ++
Sbjct: 324 QEMPYMDAVVHEIQRFITLVPSNLPHEATRDTIFRGYLIPK-------GT-VVVPTLDSV 375
Query: 403 HYDPEYYPDPEKFDPERFSPENIESRPHYTYLPFGDGPRNCIGKIL 448
YD + +PDPEKF PE F EN + + + PF G R C G+ L
Sbjct: 376 LYDNQEFPDPEKFKPEHFLNENGKFKYSDYFKPFSTGKRVCAGEGL 421
>pdb|1OG2|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG2|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
Length = 475
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 76/167 (45%), Gaps = 13/167 (7%)
Query: 288 EMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYE 347
E T + + + F G ET+S+ L + L L ++P++ +K+++EI + +
Sbjct: 262 EFTIESLENTAVDLFGAGTETTSTTLRYALLLLLKHPEVTAKVQEEIERVIGRNRSPCMQ 321
Query: 348 ICHKMSYLDKVTKEALR----MYPSLPQLDRISVK--KYKLPNTDLTLDVGTKISIPTFA 401
M Y D V E R + SLP +K Y +P GT I I +
Sbjct: 322 DRSHMPYTDAVVHEVQRYIDLLPTSLPHAVTCDIKFRNYLIPK-------GTTILISLTS 374
Query: 402 IHYDPEYYPDPEKFDPERFSPENIESRPHYTYLPFGDGPRNCIGKIL 448
+ +D + +P+PE FDP F E + ++PF G R C+G+ L
Sbjct: 375 VLHDNKEFPNPEMFDPHHFLDEGGNFKKSKYFMPFSAGKRICVGEAL 421
>pdb|1R9O|A Chain A, Crystal Structure Of P4502c9 With Flurbiprofen Bound
Length = 477
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 76/167 (45%), Gaps = 13/167 (7%)
Query: 288 EMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYE 347
E T + + + F G ET+S+ L + L L ++P++ +K+++EI + +
Sbjct: 264 EFTIESLENTAVDLFGAGTETTSTTLRYALLLLLKHPEVTAKVQEEIERVIGRNRSPCMQ 323
Query: 348 ICHKMSYLDKVTKEALR----MYPSLPQLDRISVK--KYKLPNTDLTLDVGTKISIPTFA 401
M Y D V E R + SLP +K Y +P GT I I +
Sbjct: 324 DRSHMPYTDAVVHEVQRYIDLLPTSLPHAVTCDIKFRNYLIPK-------GTTILISLTS 376
Query: 402 IHYDPEYYPDPEKFDPERFSPENIESRPHYTYLPFGDGPRNCIGKIL 448
+ +D + +P+PE FDP F E + ++PF G R C+G+ L
Sbjct: 377 VLHDNKEFPNPEMFDPHHFLDEGGNFKKSKYFMPFSAGKRICVGEAL 423
>pdb|3QZ1|A Chain A, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|B Chain B, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|C Chain C, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|D Chain D, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
Length = 496
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 72/346 (20%), Positives = 149/346 (43%), Gaps = 35/346 (10%)
Query: 117 LSKGEY---WKRLRNKLSPTFTSGKIKYMFPLIKKCSDQLITTIRKQIGESKQMSLEVKD 173
+S G+Y WK + G M P + + + + +R Q G + ++
Sbjct: 108 ISLGDYSLLWKAHKKLTRSALLLGTRSSMEPWVDQLTQEFCERMRVQAGAP----VTIQK 163
Query: 174 YCARYTTDVIGTTAFGIEINSLENPDSEFRQVSLLVMKPSVLQMLKAVLSELIPLIKYL- 232
+ T +I FG + ++L + + Q + +Q+L +++P +++
Sbjct: 164 EFSLLTCSIICYLTFGNKEDTLVHAFHDCVQDLMKTWDHWSIQIL-----DMVPFLRFFP 218
Query: 233 NLKIFDPRISQFFSN---LVKTNLSYREKNNI--KRDDFLNIMMQLQIAQRGKTLSPDDV 287
N ++ R+ Q N +V+ L +++ + + D + M+Q QR +
Sbjct: 219 NPGLW--RLKQAIENRDHMVEKQLRRHKESMVAGQWRDMTDYMLQGVGRQR---VEEGPG 273
Query: 288 EMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEI---MATKKKEGEL 344
++ + + F GG ET++S L++ + L +P+IQ +L++E+ + +
Sbjct: 274 QLLEGHVHMSVVDLFIGGTETTASTLSWAVAFLLHHPEIQRRLQEELDRELGPGASCSRV 333
Query: 345 TYEICHKMSYLDKVTKEALRMYPSLP-QLDRISVKKYKLPNTDLTLDVGTKISIPTF-AI 402
TY+ ++ L+ E LR+ P +P L + + + D+ + + IP
Sbjct: 334 TYKDRARLPLLNATIAEVLRLRPVVPLALPHRTTRPSSIFGYDIPEGM---VVIPNLQGA 390
Query: 403 HYDPEYYPDPEKFDPERFSPENIESRPHYTYLPFGDGPRNCIGKIL 448
H D + P +F P+RF +E + + L FG G R C+G+ L
Sbjct: 391 HLDETVWEQPHEFRPDRF----LEPGANPSALAFGCGARVCLGESL 432
>pdb|3IBD|A Chain A, Crystal Structure Of A Cytochrome P450 2b6 Genetic Variant
In Complex With The Inhibitor
4-(4-Chlorophenyl)imidazole
pdb|3QOA|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-Benzylpyridine.
pdb|3QU8|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|B Chain B, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|C Chain C, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|D Chain D, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|E Chain E, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|F Chain F, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3UA5|A Chain A, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
pdb|3UA5|B Chain B, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
Length = 476
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 90/394 (22%), Positives = 154/394 (39%), Gaps = 50/394 (12%)
Query: 75 PKLMVTDPELYKYILIKDFDHFVDRGMGELDAKRDPI--AGHLFLSKGEYWKRLRNKLSP 132
P +M+ E + L+ + F RG A DP + + G WK LR + S
Sbjct: 55 PVVMLCGVEAIREALVDKAEAFSGRGK---IAMVDPFFRGYGVIFANGNRWKVLR-RFSV 110
Query: 133 T----FTSGKIKYMFPLIKKCSDQLITTIRKQIGESKQMSLEVKDYCARYTTDVIGTTAF 188
T F GK + + I++ + LI +RK SK ++ T ++I + F
Sbjct: 111 TTMRDFGMGK-RSVEERIQEEAQCLIEELRK----SKGALMDPTFLFQSITANIICSIVF 165
Query: 189 GIEINSLENPDSEFRQVSLLVMKPSVLQMLKAVLSELIPLIKYLNLKIFDPRISQFFSNL 248
G D EF + +L + ++ +V +L L LK F Q + NL
Sbjct: 166 G---KRFHYQDQEF--LKMLNLFYQTFSLISSVFGQLFELFSGF-LKHFPGAHRQVYKNL 219
Query: 249 VKTNL-------SYREK--NNIKRDDFLNIMMQLQIAQRGKTLSPDDVEMTDDVITAQSF 299
+ N +RE + RD ++ ++ K S E + + +
Sbjct: 220 QEINAYIGHSVEKHRETLDPSAPRDLIDTYLLHME-----KEKSNAHSEFSHQNLNLNTL 274
Query: 300 VFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSYLDKVT 359
FF G ET+S+ L + + + P + ++ +EI KM Y + V
Sbjct: 275 SLFFAGTETTSTTLRYGFLLMLKYPHVAERVYREIEQVIGPHRPPELHDRAKMPYTEAVI 334
Query: 360 KEALRMYPSLPQ------LDRISVKKYKLP-NTDLTLDVGTKISIPTFAIHYDPEYYPDP 412
E R LP S + Y +P +T++ L + T + +DP Y+ P
Sbjct: 335 YEIQRFSDLLPMGVPHIVTQHTSFRGYIIPKDTEVFLILSTAL--------HDPHYFEKP 386
Query: 413 EKFDPERFSPENIESRPHYTYLPFGDGPRNCIGK 446
+ F+P+ F N + ++PF G R C+G+
Sbjct: 387 DAFNPDHFLDANGALKKTEAFIPFSLGKRICLGE 420
>pdb|4GQS|A Chain A, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|B Chain B, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|C Chain C, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|D Chain D, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
Length = 477
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 75/162 (46%), Gaps = 15/162 (9%)
Query: 293 VITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKM 352
VITA + G ET+S+ L + L L ++P++ +K+++EI + + M
Sbjct: 271 VITAADLLG--AGTETTSTTLRYALLLLLKHPEVTAKVQEEIERVVGRNRSPCMQDRGHM 328
Query: 353 SYLDKVTKEALR---MYP-SLPQLDRISVK--KYKLPNTDLTLDVGTKISIPTFAIHYDP 406
Y D V E R + P SLP VK Y +P GT I ++ +D
Sbjct: 329 PYTDAVVHEVQRYIDLIPTSLPHAVTCDVKFRNYLIPK-------GTTILTSLTSVLHDN 381
Query: 407 EYYPDPEKFDPERFSPENIESRPHYTYLPFGDGPRNCIGKIL 448
+ +P+PE FDP F E + ++PF G R C+G+ L
Sbjct: 382 KEFPNPEMFDPRHFLDEGGNFKKSNYFMPFSAGKRICVGEGL 423
>pdb|2HI4|A Chain A, Crystal Structure Of Human Microsomal P450 1a2 In Complex
With Alpha-Naphthoflavone
Length = 495
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 67/290 (23%), Positives = 124/290 (42%), Gaps = 44/290 (15%)
Query: 180 TDVIGTTAFGIEINSLENPDSEFRQVSLLVMKPSVLQMLKAVLS-ELIPLIKYL------ 232
+VIG FG P+S +SL+ ++ + + P+++YL
Sbjct: 173 ANVIGAMCFGQHF-----PESSDEMLSLVKNTHEFVETASSGNPLDFFPILRYLPNPALQ 227
Query: 233 NLKIFDPRISQFFSNLVKTNLSYREKNNIKRDDFLNIMMQLQIAQRGK-TLSPDD--VEM 289
K F+ R F V+ + +KN++ RD + + R L P + V +
Sbjct: 228 RFKAFNQRFLWFLQKTVQEHYQDFDKNSV-RDITGALFKHSKKGPRASGNLIPQEKIVNL 286
Query: 290 TDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEIC 349
+D+ F G++T ++ +++ L L P+IQ K+++E+ +E
Sbjct: 287 VNDI--------FGAGFDTVTTAISWSLMYLVTKPEIQRKIQKELDTVIGRERRPRLSDR 338
Query: 350 HKMSYLDKVTKEALRMYPSLPQLDRISVKKYKLPNT---DLTLD---VGTK--ISIPTFA 401
++ YL+ E R LP + +P++ D TL+ + K + + +
Sbjct: 339 PQLPYLEAFILETFRHSSFLP---------FTIPHSTTRDTTLNGFYIPKKCCVFVNQWQ 389
Query: 402 IHYDPEYYPDPEKFDPERFSPEN---IESRPHYTYLPFGDGPRNCIGKIL 448
+++DPE + DP +F PERF + I + FG G R CIG++L
Sbjct: 390 VNHDPELWEDPSEFRPERFLTADGTAINKPLSEKMMLFGMGKRRCIGEVL 439
>pdb|3LD6|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C Complex With Ketoconazole
pdb|3LD6|B Chain B, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C Complex With Ketoconazole
pdb|3JUS|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(Cyp51) In Complex With Econazole
pdb|3JUS|B Chain B, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(Cyp51) In Complex With Econazole
pdb|3JUV|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C
Length = 461
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 85/197 (43%), Gaps = 21/197 (10%)
Query: 256 REKNNIKRDDFLNIMMQLQIAQRGKTLSPDDVEMTDDVITAQSFVFFFGGYETSSSVLTF 315
R ++ K DD L ++ D +TDD + G TSS+ +
Sbjct: 223 RRQSQEKIDDILQTLLDATYK--------DGRPLTDDEVAGMLIGLLLAGQHTSSTTSAW 274
Query: 316 CLYELARNPDIQSKLRQEIMATKKKEGE----LTYEICHKMSYLDKVTKEALRMYPSLPQ 371
+ LAR+ +Q K E K GE LTY+ ++ LD+ KE LR+ P +
Sbjct: 275 MGFFLARDKTLQKKCYLE---QKTVCGENLPPLTYDQLKDLNLLDRCIKETLRLRPPIMI 331
Query: 372 LDRISVKKYKLPNT--DLTLDVGTKISIPTFAIHYDPEYYPDPEKFDPERFSPENIESRP 429
+ R++ + P T T+ G ++ + + + + F+P+R+ +N S
Sbjct: 332 MMRMA----RTPQTVAGYTIPPGHQVCVSPTVNQRLKDSWVERLDFNPDRYLQDNPASGE 387
Query: 430 HYTYLPFGDGPRNCIGK 446
+ Y+PFG G CIG+
Sbjct: 388 KFAYVPFGAGRHRCIGE 404
>pdb|2X2N|A Chain A, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|B Chain B, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|C Chain C, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|D Chain D, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
Length = 475
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 76/170 (44%), Gaps = 24/170 (14%)
Query: 285 DDVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQ--SKLRQEIMATKKKEG 342
D M+ + F G TSS T+ + L +++ LR+EI ++
Sbjct: 258 DGTPMSLHEVCGMIVAAMFAGQHTSSITTTWSMLHLMHPANVKHLEALRKEI---EEFPA 314
Query: 343 ELTYE-ICHKMSYLDKVTKEALRMYPSLPQLDR-----ISVKKYKLPNTDLTLDVGTKIS 396
+L Y + +M + ++ +E++R P L L R + V Y +P D+ I+
Sbjct: 315 QLNYNNVMDEMPFAERCARESIRRDPPLLMLMRKVMADVKVGSYVVPKGDI-------IA 367
Query: 397 IPTFAIHYDPEYYPDPEKFDPERFSPENIESRPHYTYLPFGDGPRNCIGK 446
H+D E +P+P ++DPER E +E ++ FG G CIG+
Sbjct: 368 CSPLLSHHDEEAFPEPRRWDPER--DEKVEG----AFIGFGAGVHKCIGQ 411
>pdb|3G1Q|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
Length = 450
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 76/170 (44%), Gaps = 24/170 (14%)
Query: 285 DDVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQ--SKLRQEIMATKKKEG 342
D M+ + F G TSS T+ + L +++ LR+EI ++
Sbjct: 246 DGTPMSLHEVCGMIVAAMFAGQHTSSITTTWSMLHLMHPANVKHLEALRKEI---EEFPA 302
Query: 343 ELTYE-ICHKMSYLDKVTKEALRMYPSLPQLDR-----ISVKKYKLPNTDLTLDVGTKIS 396
+L Y + +M + ++ +E++R P L L R + V Y +P D+ I+
Sbjct: 303 QLNYNNVMDEMPFAERCARESIRRDPPLLMLMRKVMADVKVGSYVVPKGDI-------IA 355
Query: 397 IPTFAIHYDPEYYPDPEKFDPERFSPENIESRPHYTYLPFGDGPRNCIGK 446
H+D E +P+P ++DPER E +E ++ FG G CIG+
Sbjct: 356 CSPLLSHHDEEAFPEPRRWDPER--DEKVEG----AFIGFGAGVHKCIGQ 399
>pdb|3P99|A Chain A, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|B Chain B, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|C Chain C, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|D Chain D, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
Length = 453
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 76/170 (44%), Gaps = 24/170 (14%)
Query: 285 DDVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQ--SKLRQEIMATKKKEG 342
D M+ + F G TSS T+ + L +++ LR+EI ++
Sbjct: 244 DGTPMSLHEVCGMIVAAMFAGQHTSSITTTWSMLHLMHPANVKHLEALRKEI---EEFPA 300
Query: 343 ELTYE-ICHKMSYLDKVTKEALRMYPSLPQLDR-----ISVKKYKLPNTDLTLDVGTKIS 396
+L Y + +M + ++ +E++R P L L R + V Y +P D+ I+
Sbjct: 301 QLNYNNVMDEMPFAERCARESIRRDPPLLMLMRKVMADVKVGSYVVPKGDI-------IA 353
Query: 397 IPTFAIHYDPEYYPDPEKFDPERFSPENIESRPHYTYLPFGDGPRNCIGK 446
H+D E +P+P ++DPER E +E ++ FG G CIG+
Sbjct: 354 CSPLLSHHDEEAFPEPRRWDPER--DEKVEG----AFIGFGAGVHKCIGQ 397
>pdb|3TIK|A Chain A, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|B Chain B, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|C Chain C, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|D Chain D, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
Length = 454
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 76/170 (44%), Gaps = 24/170 (14%)
Query: 285 DDVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQ--SKLRQEIMATKKKEG 342
D M+ + F G TSS T+ + L +++ LR+EI ++
Sbjct: 245 DGTPMSLHEVCGMIVAAMFAGQHTSSITTTWSMLHLMHPANVKHLEALRKEI---EEFPA 301
Query: 343 ELTYE-ICHKMSYLDKVTKEALRMYPSLPQLDR-----ISVKKYKLPNTDLTLDVGTKIS 396
+L Y + +M + ++ +E++R P L L R + V Y +P D+ I+
Sbjct: 302 QLNYNNVMDEMPFAERCARESIRRDPPLLMLMRKVMADVKVGSYVVPKGDI-------IA 354
Query: 397 IPTFAIHYDPEYYPDPEKFDPERFSPENIESRPHYTYLPFGDGPRNCIGK 446
H+D E +P+P ++DPER E +E ++ FG G CIG+
Sbjct: 355 CSPLLSHHDEEAFPEPRRWDPER--DEKVEG----AFIGFGAGVHKCIGQ 398
>pdb|3GW9|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
Length = 450
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 76/170 (44%), Gaps = 24/170 (14%)
Query: 285 DDVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQ--SKLRQEIMATKKKEG 342
D M+ + F G TSS T+ + L +++ LR+EI ++
Sbjct: 245 DGTPMSLHEVCGMIVAAMFAGQHTSSITTTWSMLHLMHPANVKHLEALRKEI---EEFPA 301
Query: 343 ELTYE-ICHKMSYLDKVTKEALRMYPSLPQLDR-----ISVKKYKLPNTDLTLDVGTKIS 396
+L Y + +M + ++ +E++R P L L R + V Y +P D+ I+
Sbjct: 302 QLNYNNVMDEMPFAERCARESIRRDPPLLMLMRKVMADVKVGSYVVPKGDI-------IA 354
Query: 397 IPTFAIHYDPEYYPDPEKFDPERFSPENIESRPHYTYLPFGDGPRNCIGK 446
H+D E +P+P ++DPER E +E ++ FG G CIG+
Sbjct: 355 CSPLLSHHDEEAFPEPRRWDPER--DEKVEG----AFIGFGAGVHKCIGQ 398
>pdb|2WV2|A Chain A, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Brucei In Complex With Fluconazole
Length = 475
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 76/170 (44%), Gaps = 24/170 (14%)
Query: 285 DDVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQ--SKLRQEIMATKKKEG 342
D M+ + F G TSS T+ + L +++ LR+EI ++
Sbjct: 258 DGTPMSLHEVCGMIVAAMFAGQHTSSITTTWSMLHLMHPANVKHLEALRKEI---EEFPA 314
Query: 343 ELTYE-ICHKMSYLDKVTKEALRMYPSLPQLDR-----ISVKKYKLPNTDLTLDVGTKIS 396
+L Y + +M + ++ +E++R P L L R + V Y +P D+ I+
Sbjct: 315 QLNYNNVMDEMPFAERCARESIRRDPPLLMLMRKVMADVKVGSYVVPKGDI-------IA 367
Query: 397 IPTFAIHYDPEYYPDPEKFDPERFSPENIESRPHYTYLPFGDGPRNCIGK 446
H+D E +P+P ++DPER E +E ++ FG G CIG+
Sbjct: 368 CSPLLSHHDEEAFPEPRRWDPER--DEKVEG----AFIGFGAGVHKCIGQ 411
>pdb|4I8V|A Chain A, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|B Chain B, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|C Chain C, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|D Chain D, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
Length = 491
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/242 (21%), Positives = 106/242 (43%), Gaps = 29/242 (11%)
Query: 223 SELIPLIKYL------NLKIFDPRISQFFSNLVKTNLSYREKNNIK--RDDFLNIMMQLQ 274
++ IP+++YL K + + F +VK + EK +I+ D + + Q
Sbjct: 207 ADFIPILRYLPNPSLNAFKDLNEKFYSFMQKMVKEHYKTFEKGHIRDITDSLIEHCQEKQ 266
Query: 275 IAQRGKTLSPDDVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEI 334
+ + +V+++D+ I F G++T ++ +++ L L NP +Q K+++E+
Sbjct: 267 LDENA------NVQLSDEKIINIVLDLFGAGFDTVTTAISWSLMYLVMNPRVQRKIQEEL 320
Query: 335 MATKKKEGELTYEICHKMSYLDKVTKEALRMYPSLP------QLDRISVKKYKLPNTDLT 388
+ + Y++ E R +P S+K + +P
Sbjct: 321 DTVIGRSRRPRLSDRSHLPYMEAFILETFRHSSFVPFTIPHSTTRDTSLKGFYIPK---- 376
Query: 389 LDVGTKISIPTFAIHYDPEYYPDPEKFDPERF-SPEN-IESRPHYTYLPFGDGPRNCIGK 446
G + + + I++D + + +P +F PERF +P+ I+ + FG G R CIG+
Sbjct: 377 ---GRCVFVNQWQINHDQKLWVNPSEFLPERFLTPDGAIDKVLSEKVIIFGMGKRKCIGE 433
Query: 447 IL 448
+
Sbjct: 434 TI 435
>pdb|1DT6|A Chain A, Structure Of Mammalian Cytochrome P450 2c5
pdb|1N6B|A Chain A, Microsomal Cytochrome P450 2c5/3lvdh Complex With A
Dimethyl Derivative Of Sulfaphenazole
pdb|1NR6|A Chain A, Microsomal Cytochrome P450 2c53LVDH COMPLEX WITH
DICLOFENAC
Length = 473
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 95/209 (45%), Gaps = 12/209 (5%)
Query: 241 ISQFFSNLVKTNLSYREKNNIKRDDFLNIMMQLQIAQRGKTLSPDDVEMTDDVITAQSFV 300
I F VK + + NN + DF++ + +++ Q +++E T + +
Sbjct: 222 IKNFIMEKVKEHQKLLDVNNPR--DFIDCFL-IKMEQE------NNLEFTLESLVIAVSD 272
Query: 301 FFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSYLDKVTK 360
F G ET+S+ L + L L ++P++ +++++EI + + +M Y D V
Sbjct: 273 LFGAGTETTSTTLRYSLLLLLKHPEVAARVQEEIERVIGRHRSPCMQDRSRMPYTDAVIH 332
Query: 361 EALRMYPSLP-QLDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPEYYPDPEKFDPER 419
E R LP L + + N + GT I ++ +D + +P+P+ FDP
Sbjct: 333 EIQRFIDLLPTNLPHAVTRDVRFRN--YFIPKGTDIITSLTSVLHDEKAFPNPKVFDPGH 390
Query: 420 FSPENIESRPHYTYLPFGDGPRNCIGKIL 448
F E+ + ++PF G R C+G+ L
Sbjct: 391 FLDESGNFKKSDYFMPFSAGKRMCVGEGL 419
>pdb|3L4D|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
Length = 453
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 76/170 (44%), Gaps = 23/170 (13%)
Query: 285 DDVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYEL--ARNPDIQSKLRQEIMATKKKEG 342
D M+ + F G TS+ T+ L L RN +KL QEI +
Sbjct: 244 DGTRMSQHEVCGMIVAAMFAGQHTSTITTTWSLLHLMDPRNKRHLAKLHQEI---DEFPA 300
Query: 343 ELTYE-ICHKMSYLDKVTKEALRMYPSLPQLDR-----ISVKKYKLPNTDLTLDVGTKIS 396
+L Y+ + +M + ++ +E++R P L L R + V KY +P D+ I+
Sbjct: 301 QLNYDNVMEEMPFAEQCARESIRRDPPLVMLMRKVLKPVQVGKYVVPEGDI-------IA 353
Query: 397 IPTFAIHYDPEYYPDPEKFDPERFSPENIESRPHYTYLPFGDGPRNCIGK 446
H D E +P+P +++PER + + ++ + FG G CIG+
Sbjct: 354 CSPLLSHQDEEAFPNPREWNPER-NMKLVDG----AFCGFGAGVHKCIGE 398
>pdb|3DAX|A Chain A, Crystal Structure Of Human Cyp7a1
pdb|3DAX|B Chain B, Crystal Structure Of Human Cyp7a1
Length = 491
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/243 (21%), Positives = 109/243 (44%), Gaps = 36/243 (14%)
Query: 235 KIFDPRISQFFSNLVKTNLSYREK-------NNIKRDDFLNIMMQLQIAQRGKTLSPDDV 287
K+F ++ ++ +T + REK N+++ + ++ ++ L++ D +
Sbjct: 197 KVFPALVAGLPIHMFRTAHNAREKLAESLRHENLQKRESISELISLRM------FLNDTL 250
Query: 288 EMTDDVITAQSFVFFFGGYETSSSVLTF-CLYELARNPDIQSKLRQEIMATKKKEGE--- 343
DD+ A++ + + ++ TF L+++ RNP+ +E+ T + G+
Sbjct: 251 STFDDLEKAKTHLVVLWASQANTIPATFWSLFQMIRNPEAMKAATEEVKRTLENAGQKVS 310
Query: 344 -------LTYEICHKMSYLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKIS 396
L+ + + LD + KE+LR+ + + R + + + L D + ++
Sbjct: 311 LEGNPICLSQAELNDLPVLDSIIKESLRLSSASLNI-RTAKEDFTLHLEDGSYNIRKDDI 369
Query: 397 IPTFA--IHYDPEYYPDPEKFDPERFSPENIESRP---------HYTYLPFGDGPRNCIG 445
I + +H DPE YPDP F +R+ EN +++ Y Y+PFG G C G
Sbjct: 370 IALYPQLMHLDPEIYPDPLTFKYDRYLDENGKTKTTFYCNGLKLKYYYMPFGSGATICPG 429
Query: 446 KIL 448
++
Sbjct: 430 RLF 432
>pdb|3SN5|A Chain A, Crystal Structure Of Human Cyp7a1 In Complex With
Cholest-4-En-3-One
pdb|3SN5|B Chain B, Crystal Structure Of Human Cyp7a1 In Complex With
Cholest-4-En-3-One
pdb|3V8D|A Chain A, Crystal Structure Of Human Cyp7a1 In Complex With
7-Ketocholesterol
pdb|3V8D|B Chain B, Crystal Structure Of Human Cyp7a1 In Complex With
7-Ketocholesterol
Length = 491
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/243 (21%), Positives = 109/243 (44%), Gaps = 36/243 (14%)
Query: 235 KIFDPRISQFFSNLVKTNLSYREK-------NNIKRDDFLNIMMQLQIAQRGKTLSPDDV 287
K+F ++ ++ +T + REK N+++ + ++ ++ L++ D +
Sbjct: 197 KVFPALVAGLPIHMFRTAHNAREKLAESLRHENLQKRESISELISLRM------FLNDTL 250
Query: 288 EMTDDVITAQSFVFFFGGYETSSSVLTF-CLYELARNPDIQSKLRQEIMATKKKEGE--- 343
DD+ A++ + + ++ TF L+++ RNP+ +E+ T + G+
Sbjct: 251 STFDDLEKAKTHLVVLWASQANTIPATFWSLFQMIRNPEAMKAATEEVKRTLENAGQKVS 310
Query: 344 -------LTYEICHKMSYLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKIS 396
L+ + + LD + KE+LR+ + + R + + + L D + ++
Sbjct: 311 LEGNPICLSQAELNDLPVLDSIIKESLRLSSASLNI-RTAKEDFTLHLEDGSYNIRKDDI 369
Query: 397 IPTFA--IHYDPEYYPDPEKFDPERFSPENIESRP---------HYTYLPFGDGPRNCIG 445
I + +H DPE YPDP F +R+ EN +++ Y Y+PFG G C G
Sbjct: 370 IALYPQLMHLDPEIYPDPLTFKYDRYLDENGKTKTTFYCNGLKLKYYYMPFGSGATICPG 429
Query: 446 KIL 448
++
Sbjct: 430 RLF 432
>pdb|1Z8Q|A Chain A, Ferrous Dioxygen Complex Of The A245t Cytochrome P450eryf
Length = 404
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 69/326 (21%), Positives = 133/326 (40%), Gaps = 71/326 (21%)
Query: 125 RLRNKLSPTFTSGKIKYMFPLIKKCSDQLITTIRKQIGESKQMSLEVKDYCARYTTDVIG 184
RLR +S FT +++ M P +++ + +L+ ++G+S + + V + VI
Sbjct: 100 RLRKLVSQEFTVRRVEAMRPRVEQITAELL----DEVGDSGVVDI-VDRFAHPLPIKVI- 153
Query: 185 TTAFGIEINSLENPDSEFRQVS--LLVMKPSVLQMLKAVLSELIPLIKYLNLKIFDPRIS 242
G++ E EF + S +LVM P + E++
Sbjct: 154 CELLGVD----EKYRGEFGRWSSEILVMDPERAEQRGQAAREVV---------------- 193
Query: 243 QFFSNLVKTNLSYREKNNIKRDDFLNIMMQLQIAQRGKTLSPDDVEMTDDVITAQSFVFF 302
F +LV+ + DD L+ ++++Q DD ++ D +T+ + V
Sbjct: 194 NFILDLVE------RRRTEPGDDLLSALIRVQ--------DDDDGRLSADELTSIALVLL 239
Query: 303 FGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSYLDKVTKEA 362
G+ETS S++ Y L +PD + +R++ A E+ I + +E
Sbjct: 240 LAGFETSVSLIGIGTYLLLTHPDQLALVRRDPSALPNAVEEILRYIAPPETTTRFAAEEV 299
Query: 363 LRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPEYYPDPEKFDPERFSP 422
++ +++ +Y + + + A + DP+ +PDP +FD R
Sbjct: 300 --------EIGGVAIPQY------------STVLVANGAANRDPKQFPDPHRFDVTR--- 336
Query: 423 ENIESRPHYTYLPFGDGPRNCIGKIL 448
++R H L FG G C+G+ L
Sbjct: 337 ---DTRGH---LSFGQGIHFCMGRPL 356
>pdb|1EGY|A Chain A, Cytochrome P450eryf With 9-Aminophenanthrene Bound
pdb|1EUP|A Chain A, X-Ray Crystal Structure Of Cytochrome P450eryf With
Androstendione Bound
pdb|1JIN|A Chain A, P450eryfKETOCONAZOLE
pdb|1OXA|A Chain A, Cytochrome P450 (Donor:o2 Oxidoreductase)
Length = 403
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 69/333 (20%), Positives = 126/333 (37%), Gaps = 85/333 (25%)
Query: 125 RLRNKLSPTFTSGKIKYMFPLIKKCSDQLITTIRKQIGESKQMS--------LEVKDYCA 176
RLR +S FT +++ M P +++ + +L+ ++G+S + L +K C
Sbjct: 99 RLRKLVSQEFTVRRVEAMRPRVEQITAELL----DEVGDSGVVDIVDRFAHPLPIKVICE 154
Query: 177 RYTTDVIGTTAFGIEINSLENPDSEFRQVS-LLVMKPSVLQMLKAVLSELIPLIKYLNLK 235
D AFG R S +LVM P + E++
Sbjct: 155 LLGVDEAARGAFG-------------RWSSEILVMDPERAEQRGQAAREVV--------- 192
Query: 236 IFDPRISQFFSNLVKTNLSYREKNNIKRDDFLNIMMQLQIAQRGKTLSPDDVEMTDDVIT 295
F +LV+ + DD L+ ++ +Q DD ++ D +T
Sbjct: 193 -------NFILDLVE------RRRTEPGDDLLSALISVQ--------DDDDGRLSADELT 231
Query: 296 AQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSYL 355
+ + V G+E S S++ Y L +PD + +R + A E+ I +
Sbjct: 232 SIALVLLLAGFEASVSLIGIGTYLLLTHPDQLALVRADPSALPNAVEEILRYIAPPETTT 291
Query: 356 DKVTKEALRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPEYYPDPEKF 415
+E ++ +++ +Y + + + A + DP +PDP +F
Sbjct: 292 RFAAEEV--------EIGGVAIPQY------------STVLVANGAANRDPSQFPDPHRF 331
Query: 416 DPERFSPENIESRPHYTYLPFGDGPRNCIGKIL 448
D R ++R H L FG G C+G+ L
Sbjct: 332 DVTR------DTRGH---LSFGQGIHFCMGRPL 355
>pdb|1Z8P|A Chain A, Ferrous Dioxygen Complex Of The A245s Cytochrome P450eryf
Length = 404
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 68/326 (20%), Positives = 133/326 (40%), Gaps = 71/326 (21%)
Query: 125 RLRNKLSPTFTSGKIKYMFPLIKKCSDQLITTIRKQIGESKQMSLEVKDYCARYTTDVIG 184
RLR +S FT +++ M P +++ + +L+ ++G+S + + V + VI
Sbjct: 100 RLRKLVSQEFTVRRVEAMRPRVEQITAELL----DEVGDSGVVDI-VDRFAHPLPIKVI- 153
Query: 185 TTAFGIEINSLENPDSEFRQVS--LLVMKPSVLQMLKAVLSELIPLIKYLNLKIFDPRIS 242
G++ E EF + S +LVM P + E++
Sbjct: 154 CELLGVD----EKYRGEFGRWSSEILVMDPERAEQRGQAAREVV---------------- 193
Query: 243 QFFSNLVKTNLSYREKNNIKRDDFLNIMMQLQIAQRGKTLSPDDVEMTDDVITAQSFVFF 302
F +LV+ + DD L+ ++++Q DD ++ D +T+ + V
Sbjct: 194 NFILDLVE------RRRTEPGDDLLSALIRVQ--------DDDDGRLSADELTSIALVLL 239
Query: 303 FGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSYLDKVTKEA 362
G+E+S S++ Y L +PD + +R++ A E+ I + +E
Sbjct: 240 LAGFESSVSLIGIGTYLLLTHPDQLALVRRDPSALPNAVEEILRYIAPPETTTRFAAEEV 299
Query: 363 LRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPEYYPDPEKFDPERFSP 422
++ +++ +Y + + + A + DP+ +PDP +FD R
Sbjct: 300 --------EIGGVAIPQY------------STVLVANGAANRDPKQFPDPHRFDVTR--- 336
Query: 423 ENIESRPHYTYLPFGDGPRNCIGKIL 448
++R H L FG G C+G+ L
Sbjct: 337 ---DTRGH---LSFGQGIHFCMGRPL 356
>pdb|1JIP|A Chain A, P450eryf(A245s)KETOCONAZOLE
Length = 403
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 68/326 (20%), Positives = 133/326 (40%), Gaps = 71/326 (21%)
Query: 125 RLRNKLSPTFTSGKIKYMFPLIKKCSDQLITTIRKQIGESKQMSLEVKDYCARYTTDVIG 184
RLR +S FT +++ M P +++ + +L+ ++G+S + + V + VI
Sbjct: 99 RLRKLVSQEFTVRRVEAMRPRVEQITAELL----DEVGDSGVVDI-VDRFAHPLPIKVI- 152
Query: 185 TTAFGIEINSLENPDSEFRQVS--LLVMKPSVLQMLKAVLSELIPLIKYLNLKIFDPRIS 242
G++ E EF + S +LVM P + E++
Sbjct: 153 CELLGVD----EKYRGEFGRWSSEILVMDPERAEQRGQAAREVV---------------- 192
Query: 243 QFFSNLVKTNLSYREKNNIKRDDFLNIMMQLQIAQRGKTLSPDDVEMTDDVITAQSFVFF 302
F +LV+ + DD L+ ++++Q DD ++ D +T+ + V
Sbjct: 193 NFILDLVE------RRRTEPGDDLLSALIRVQ--------DDDDGRLSADELTSIALVLL 238
Query: 303 FGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSYLDKVTKEA 362
G+E+S S++ Y L +PD + +R++ A E+ I + +E
Sbjct: 239 LAGFESSVSLIGIGTYLLLTHPDQLALVRRDPSALPNAVEEILRYIAPPETTTRFAAEEV 298
Query: 363 LRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPEYYPDPEKFDPERFSP 422
++ +++ +Y + + + A + DP+ +PDP +FD R
Sbjct: 299 --------EIGGVAIPQY------------STVLVANGAANRDPKQFPDPHRFDVTR--- 335
Query: 423 ENIESRPHYTYLPFGDGPRNCIGKIL 448
++R H L FG G C+G+ L
Sbjct: 336 ---DTRGH---LSFGQGIHFCMGRPL 355
>pdb|1JIO|A Chain A, P450eryf/6deb
Length = 403
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 68/326 (20%), Positives = 132/326 (40%), Gaps = 71/326 (21%)
Query: 125 RLRNKLSPTFTSGKIKYMFPLIKKCSDQLITTIRKQIGESKQMSLEVKDYCARYTTDVIG 184
RLR +S FT +++ M P +++ + +L+ ++G+S + + V + VI
Sbjct: 99 RLRKLVSQEFTVRRVEAMRPRVEQITAELL----DEVGDSGVVDI-VDRFAHPLPIKVI- 152
Query: 185 TTAFGIEINSLENPDSEFRQVS--LLVMKPSVLQMLKAVLSELIPLIKYLNLKIFDPRIS 242
G++ E EF + S +LVM P + E++
Sbjct: 153 CELLGVD----EKYRGEFGRWSSEILVMDPERAEQRGQAAREVV---------------- 192
Query: 243 QFFSNLVKTNLSYREKNNIKRDDFLNIMMQLQIAQRGKTLSPDDVEMTDDVITAQSFVFF 302
F +LV+ + DD L+ ++++Q DD ++ D +T+ + V
Sbjct: 193 NFILDLVE------RRRTEPGDDLLSALIRVQ--------DDDDGRLSADELTSIALVLL 238
Query: 303 FGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSYLDKVTKEA 362
G+E S S++ Y L +PD + +R++ A E+ I + +E
Sbjct: 239 LAGFEASVSLIGIGTYLLLTHPDQLALVRRDPSALPNAVEEILRYIAPPETTTRFAAEEV 298
Query: 363 LRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPEYYPDPEKFDPERFSP 422
++ +++ +Y + + + A + DP+ +PDP +FD R
Sbjct: 299 --------EIGGVAIPQY------------STVLVANGAANRDPKQFPDPHRFDVTR--- 335
Query: 423 ENIESRPHYTYLPFGDGPRNCIGKIL 448
++R H L FG G C+G+ L
Sbjct: 336 ---DTRGH---LSFGQGIHFCMGRPL 355
>pdb|1Z8O|A Chain A, Ferrous Dioxygen Complex Of The Wild-Type Cytochrome
P450eryf
Length = 404
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 68/326 (20%), Positives = 132/326 (40%), Gaps = 71/326 (21%)
Query: 125 RLRNKLSPTFTSGKIKYMFPLIKKCSDQLITTIRKQIGESKQMSLEVKDYCARYTTDVIG 184
RLR +S FT +++ M P +++ + +L+ ++G+S + + V + VI
Sbjct: 100 RLRKLVSQEFTVRRVEAMRPRVEQITAELL----DEVGDSGVVDI-VDRFAHPLPIKVI- 153
Query: 185 TTAFGIEINSLENPDSEFRQVS--LLVMKPSVLQMLKAVLSELIPLIKYLNLKIFDPRIS 242
G++ E EF + S +LVM P + E++
Sbjct: 154 CELLGVD----EKYRGEFGRWSSEILVMDPERAEQRGQAAREVV---------------- 193
Query: 243 QFFSNLVKTNLSYREKNNIKRDDFLNIMMQLQIAQRGKTLSPDDVEMTDDVITAQSFVFF 302
F +LV+ + DD L+ ++++Q DD ++ D +T+ + V
Sbjct: 194 NFILDLVE------RRRTEPGDDLLSALIRVQ--------DDDDGRLSADELTSIALVLL 239
Query: 303 FGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSYLDKVTKEA 362
G+E S S++ Y L +PD + +R++ A E+ I + +E
Sbjct: 240 LAGFEASVSLIGIGTYLLLTHPDQLALVRRDPSALPNAVEEILRYIAPPETTTRFAAEEV 299
Query: 363 LRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPEYYPDPEKFDPERFSP 422
++ +++ +Y + + + A + DP+ +PDP +FD R
Sbjct: 300 --------EIGGVAIPQY------------STVLVANGAANRDPKQFPDPHRFDVTR--- 336
Query: 423 ENIESRPHYTYLPFGDGPRNCIGKIL 448
++R H L FG G C+G+ L
Sbjct: 337 ---DTRGH---LSFGQGIHFCMGRPL 356
>pdb|3KHM|A Chain A, Crystal Structure Of Sterol 14alpha-Demethylase (Cyp51)
From Trypanosoma Cruzi In Complex With Inhibitor
Fluconazole
Length = 464
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 76/175 (43%), Gaps = 24/175 (13%)
Query: 280 KTLSPDDVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYEL--ARNPDIQSKLRQEIMAT 337
K + D M+ + F G TS+ ++ + L +N KL +EI
Sbjct: 244 KAVYRDGTRMSLHEVCGMIVAAMFAGQHTSTITTSWSMLHLMHPKNKKWLDKLHKEI--- 300
Query: 338 KKKEGELTYE-ICHKMSYLDKVTKEALRMYPSLPQLDR-----ISVKKYKLPNTDLTLDV 391
+ +L Y+ + +M + ++ +E++R P L + R + V Y +P D+
Sbjct: 301 DEFPAQLNYDNVMDEMPFAERCVRESIRRDPPLLMVMRMVKAEVKVGSYVVPKGDI---- 356
Query: 392 GTKISIPTFAIHYDPEYYPDPEKFDPERFSPENIESRPHYTYLPFGDGPRNCIGK 446
I+ H+D E +P+P +DPER E ++ ++ FG G CIG+
Sbjct: 357 ---IACSPLLSHHDEEAFPNPRLWDPER--DEKVDG----AFIGFGAGVHKCIGQ 402
>pdb|3K1O|A Chain A, Crystal Structure Of Sterol 14-alpha Demethylase (cyp51)
From Trypanosoma Cruzi In Complex With A Potential
Antichagasic Drug, Posaconazole
pdb|3KSW|A Chain A, Crystal Structure Of Sterol 14alpha-demethylase (cyp51)
From Trypanosoma Cruzi In Complex With An Inhibitor Vnf
((4-(4-
Chlorophenyl)-n-[2-(1h-imidazol-1-yl)-1-
phenylethyl]benzamide)
Length = 458
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 76/175 (43%), Gaps = 24/175 (13%)
Query: 280 KTLSPDDVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYEL--ARNPDIQSKLRQEIMAT 337
K + D M+ + F G TS+ ++ + L +N KL +EI
Sbjct: 238 KAVYRDGTRMSLHEVCGMIVAAMFAGQHTSTITTSWSMLHLMHPKNKKWLDKLHKEI--- 294
Query: 338 KKKEGELTYE-ICHKMSYLDKVTKEALRMYPSLPQLDR-----ISVKKYKLPNTDLTLDV 391
+ +L Y+ + +M + ++ +E++R P L + R + V Y +P D+
Sbjct: 295 DEFPAQLNYDNVMDEMPFAERCVRESIRRDPPLLMVMRMVKAEVKVGSYVVPKGDI---- 350
Query: 392 GTKISIPTFAIHYDPEYYPDPEKFDPERFSPENIESRPHYTYLPFGDGPRNCIGK 446
I+ H+D E +P+P +DPER E ++ ++ FG G CIG+
Sbjct: 351 ---IACSPLLSHHDEEAFPNPRLWDPER--DEKVDG----AFIGFGAGVHKCIGQ 396
>pdb|3P3L|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Wildtype) From Streptomyces Thioluteus
pdb|3P3L|B Chain B, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Wildtype) From Streptomyces Thioluteus
Length = 406
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 69/165 (41%), Gaps = 34/165 (20%)
Query: 285 DDVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGEL 344
DD E+ V T GYET++ L +Y+ A++PD K+ K+ EL
Sbjct: 229 DDYELRTLVATV-----LVAGYETTNHQLALAMYDFAQHPDQWMKI--------KENPEL 275
Query: 345 TYEICHKMSYLDKVTKEALRMYPSLP-QLDRISVKKYKLPNTDLTLDVGTKISIPTFAIH 403
+ +E LR P+LP R++ + +++ + + GT + + H
Sbjct: 276 A----------PQAVEEVLRWSPTLPVTATRVAAEDFEV--NGVRIPTGTPVFMCAHVAH 323
Query: 404 YDPEYYPDPEKFDPERFSPENIESRPHYTYLPFGDGPRNCIGKIL 448
DP + D ++FD I + + FG GP C+G L
Sbjct: 324 RDPRVFADADRFD--------ITVKREAPSIAFGGGPHFCLGTAL 360
>pdb|2WUZ|A Chain A, X-Ray Structure Of Cyp51 From Trypanosoma Cruzi In Complex
With Fluconazole In Alternative Conformation
pdb|2WUZ|B Chain B, X-Ray Structure Of Cyp51 From Trypanosoma Cruzi In Complex
With Fluconazole In Alternative Conformation
pdb|2WX2|A Chain A, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Cruzi In Complex With Fluconazole
pdb|2WX2|B Chain B, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Cruzi In Complex With Fluconazole
Length = 473
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 76/175 (43%), Gaps = 24/175 (13%)
Query: 280 KTLSPDDVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYEL--ARNPDIQSKLRQEIMAT 337
K + D M+ + F G TS+ ++ + L +N KL +EI
Sbjct: 253 KAVYRDGTRMSLHEVCGMIVAAMFAGQHTSTITTSWSMLHLMHPKNKKWLDKLHKEI--- 309
Query: 338 KKKEGELTYE-ICHKMSYLDKVTKEALRMYPSLPQLDR-----ISVKKYKLPNTDLTLDV 391
+ +L Y+ + +M + ++ +E++R P L + R + V Y +P D+
Sbjct: 310 DEFPAQLNYDNVMDEMPFAERCVRESIRRDPPLLMVMRMVKAEVKVGSYVVPKGDI---- 365
Query: 392 GTKISIPTFAIHYDPEYYPDPEKFDPERFSPENIESRPHYTYLPFGDGPRNCIGK 446
I+ H+D E +P+P +DPER E ++ ++ FG G CIG+
Sbjct: 366 ---IACSPLLSHHDEEAFPNPRLWDPER--DEKVDG----AFIGFGAGVHKCIGQ 411
>pdb|2Q6N|A Chain A, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|B Chain B, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|C Chain C, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|D Chain D, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|E Chain E, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|F Chain F, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|G Chain G, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
Length = 478
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 92/392 (23%), Positives = 164/392 (41%), Gaps = 46/392 (11%)
Query: 75 PKLMVTDPELYKYILIKDFDHFVDRGMGELDAKRDPI-AGH-LFLSKGEYWKRLRNKLSP 132
P +++ + + L+ + F RG A DPI G+ + + GE W+ LR
Sbjct: 55 PVVVLCGTDAIREALVDQAEAFSGRGK---IAVVDPIFQGYGVIFANGERWRALRRFSLA 111
Query: 133 T---FTSGKIKYMFPLIKKCSDQLITTIRKQIGESKQMSLEVKDYCARYTTDVIGTTAFG 189
T F GK + + I++ + L+ +RK SK L+ T+++I + FG
Sbjct: 112 TMRDFGMGK-RSVEERIQEEARCLVEELRK----SKGALLDNTLLFHSITSNIICSIVFG 166
Query: 190 IEINSLENPDSEFRQVSLLVMKPSVLQMLKAVLSELIPLIKYLNLKIFDPRISQFFSNLV 249
+ D F + LL + ++ + S++ L LK F Q + NL
Sbjct: 167 ---KRFDYKDPVF--LRLLDLFFQSFSLISSFSSQVFELFSGF-LKYFPGTHRQIYRNLQ 220
Query: 250 KTNL---SYREKNNIKRD-----DFLNIMMQLQIAQRGKTLSPDDVEMTDDVITAQSFVF 301
+ N EK+ D DF+++ L ++ K+ + + ++T S
Sbjct: 221 EINTFIGQSVEKHRATLDPSNPRDFIDVY--LLRMEKDKSDPSSEFHHQNLILTVLSL-- 276
Query: 302 FFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSYLDKVTKE 361
FF G ET+S+ L + + + P + ++++EI + KM Y D V E
Sbjct: 277 FFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHRPPALDDRAKMPYTDAVIHE 336
Query: 362 ALRMYPSLPQLDRISVKK------YKLP-NTDLTLDVGTKISIPTFAIHYDPEYYPDPEK 414
R+ +P +V K Y +P NT++ + + A+H DP Y+ P
Sbjct: 337 IQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEV-------FPVLSSALH-DPRYFETPNT 388
Query: 415 FDPERFSPENIESRPHYTYLPFGDGPRNCIGK 446
F+P F N + + ++PF G R C+G+
Sbjct: 389 FNPGHFLDANGALKRNEGFMPFSLGKRICLGE 420
>pdb|3P3O|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Ntermii) From Streptomyces Thioluteus
pdb|3P3X|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Nterm- Aurh-I) From Streptomyces Thioluteus
pdb|3P3X|B Chain B, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Nterm- Aurh-I) From Streptomyces Thioluteus
pdb|3P3Z|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh From Streptomyces Thioluteus In Complex With
Ancymidol
Length = 416
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 69/165 (41%), Gaps = 34/165 (20%)
Query: 285 DDVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGEL 344
DD E+ V T GYET++ L +Y+ A++PD K+ K+ EL
Sbjct: 239 DDYELRTLVATV-----LVAGYETTNHQLALAMYDFAQHPDQWMKI--------KENPEL 285
Query: 345 TYEICHKMSYLDKVTKEALRMYPSLP-QLDRISVKKYKLPNTDLTLDVGTKISIPTFAIH 403
+ +E LR P+LP R++ + +++ + + GT + + H
Sbjct: 286 A----------PQAVEEVLRWSPTLPVTATRVAAEDFEV--NGVRIPTGTPVFMCAHVAH 333
Query: 404 YDPEYYPDPEKFDPERFSPENIESRPHYTYLPFGDGPRNCIGKIL 448
DP + D ++FD I + + FG GP C+G L
Sbjct: 334 RDPRVFADADRFD--------ITVKREAPSIAFGGGPHFCLGTAL 370
>pdb|1WIY|A Chain A, Crystal Structure Analysis Of A 6-Coordinated Cytochorome
P450 From Thermus Thermophilus Hb8
pdb|1WIY|B Chain B, Crystal Structure Analysis Of A 6-Coordinated Cytochorome
P450 From Thermus Thermophilus Hb8
Length = 389
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 62/151 (41%), Gaps = 24/151 (15%)
Query: 296 AQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSYL 355
+++ G+ET +S LT+ L+ PD Q + +
Sbjct: 213 SEAVTLLVAGHETVASALTWSFLLLSHRPDWQKR------------------VAESEEAA 254
Query: 356 DKVTKEALRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPEYYPDPEKF 415
+EALR+YP L R +++ L D L GT + + + Y+P+ E F
Sbjct: 255 LAAFQEALRLYPPAWILTR-RLERPLLLGED-RLPQGTTLVLSPYVTQRL--YFPEGEAF 310
Query: 416 DPERFSPENIESRPHYTYLPFGDGPRNCIGK 446
PERF E P Y PFG G R C+G+
Sbjct: 311 QPERFLAER--GTPSGRYFPFGLGQRLCLGR 339
>pdb|1PQ2|A Chain A, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|1PQ2|B Chain B, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|2NNH|A Chain A, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNH|B Chain B, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNI|A Chain A, Cyp2c8dh Complexed With Montelukast
pdb|2NNJ|A Chain A, Cyp2c8dh Complexed With Felodipine
pdb|2VN0|A Chain A, Cyp2c8dh Complexed With Troglitazone
Length = 476
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 68/154 (44%), Gaps = 13/154 (8%)
Query: 301 FFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSYLDKVTK 360
F G ET+S+ L + L L ++P++ +K+++EI + + M Y D V
Sbjct: 276 LFVAGTETTSTTLRYGLLLLLKHPEVTAKVQEEIDHVIGRHRSPCMQDRSHMPYTDAVVH 335
Query: 361 EALRMYPSLPQLDRISV------KKYKLPNTDLTLDVGTKISIPTFAIHYDPEYYPDPEK 414
E R +P +V + Y +P GT I ++ +D + +P+P
Sbjct: 336 EIQRYSDLVPTGVPHAVTTDTKFRNYLIPK-------GTTIMALLTSVLHDDKEFPNPNI 388
Query: 415 FDPERFSPENIESRPHYTYLPFGDGPRNCIGKIL 448
FDP F +N + ++PF G R C G+ L
Sbjct: 389 FDPGHFLDKNGNFKKSDYFMPFSAGKRICAGEGL 422
>pdb|1SUO|A Chain A, Structure Of Mammalian Cytochrome P450 2b4 With Bound
4-(4- Chlorophenyl)imidazole
pdb|2BDM|A Chain A, Structure Of Cytochrome P450 2b4 With Bound Bifonazole
pdb|3G5N|A Chain A, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|B Chain B, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|C Chain C, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|D Chain D, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|A Chain A, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|B Chain B, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|C Chain C, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|D Chain D, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3KW4|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Ticlopidine
pdb|3ME6|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|B Chain B, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|C Chain C, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|D Chain D, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3MVR|A Chain A, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3MVR|B Chain B, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3R1A|A Chain A, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|B Chain B, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|C Chain C, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|D Chain D, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|E Chain E, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|F Chain F, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|G Chain G, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|H Chain H, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|A Chain A, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|B Chain B, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|C Chain C, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|D Chain D, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3TMZ|A Chain A, Crystal Structure Of P450 2b4(H226y) In Complex With
Amlodipine
pdb|3UAS|A Chain A, Cytochrome P450 2b4 Covalently Bound To The
Mechanism-based Inactivator 9-ethynylphenanthrene
Length = 476
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 92/392 (23%), Positives = 164/392 (41%), Gaps = 46/392 (11%)
Query: 75 PKLMVTDPELYKYILIKDFDHFVDRGMGELDAKRDPI-AGH-LFLSKGEYWKRLRNKLSP 132
P +++ + + L+ + F RG A DPI G+ + + GE W+ LR
Sbjct: 55 PVVVLCGTDAIREALVDQAEAFSGRGK---IAVVDPIFQGYGVIFANGERWRALRRFSLA 111
Query: 133 T---FTSGKIKYMFPLIKKCSDQLITTIRKQIGESKQMSLEVKDYCARYTTDVIGTTAFG 189
T F GK + + I++ + L+ +RK SK L+ T+++I + FG
Sbjct: 112 TMRDFGMGK-RSVEERIQEEARCLVEELRK----SKGALLDNTLLFHSITSNIICSIVFG 166
Query: 190 IEINSLENPDSEFRQVSLLVMKPSVLQMLKAVLSELIPLIKYLNLKIFDPRISQFFSNLV 249
+ D F + LL + ++ + S++ L LK F Q + NL
Sbjct: 167 ---KRFDYKDPVF--LRLLDLFFQSFSLISSFSSQVFELFSGF-LKYFPGTHRQIYRNLQ 220
Query: 250 KTNL---SYREKNNIKRD-----DFLNIMMQLQIAQRGKTLSPDDVEMTDDVITAQSFVF 301
+ N EK+ D DF+++ L ++ K+ + + ++T S
Sbjct: 221 EINTFIGQSVEKHRATLDPSNPRDFIDVY--LLRMEKDKSDPSSEFHHQNLILTVLSL-- 276
Query: 302 FFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSYLDKVTKE 361
FF G ET+S+ L + + + P + ++++EI + KM Y D V E
Sbjct: 277 FFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHRPPALDDRAKMPYTDAVIHE 336
Query: 362 ALRMYPSLPQLDRISVKK------YKLP-NTDLTLDVGTKISIPTFAIHYDPEYYPDPEK 414
R+ +P +V K Y +P NT++ + + A+H DP Y+ P
Sbjct: 337 IQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEV-------FPVLSSALH-DPRYFETPNT 388
Query: 415 FDPERFSPENIESRPHYTYLPFGDGPRNCIGK 446
F+P F N + + ++PF G R C+G+
Sbjct: 389 FNPGHFLDANGALKRNEGFMPFSLGKRICLGE 420
>pdb|1PO5|A Chain A, Structure Of Mammalian Cytochrome P450 2b4
Length = 476
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 68/152 (44%), Gaps = 15/152 (9%)
Query: 302 FFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSYLDKVTKE 361
FF G ET+S+ L + + + P + ++++EI + KM Y D V E
Sbjct: 277 FFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHRPPALDDRAKMPYTDAVIHE 336
Query: 362 ALRMYPSLPQLDRISVKK------YKLP-NTDLTLDVGTKISIPTFAIHYDPEYYPDPEK 414
R+ +P +V K Y +P NT++ + + A+H DP Y+ P
Sbjct: 337 IQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEV-------FPVLSSALH-DPRYFETPNT 388
Query: 415 FDPERFSPENIESRPHYTYLPFGDGPRNCIGK 446
F+P F N + + ++PF G R C+G+
Sbjct: 389 FNPGHFLDANGALKRNEGFMPFSLGKRICLGE 420
>pdb|1N97|A Chain A, Crystal Stucture Of Cyp175a1 From Thermus Thermophillus
Strain Hb27
pdb|1N97|B Chain B, Crystal Stucture Of Cyp175a1 From Thermus Thermophillus
Strain Hb27
Length = 389
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 62/151 (41%), Gaps = 24/151 (15%)
Query: 296 AQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSYL 355
+++ G+ET +S LT+ L+ PD Q + +
Sbjct: 213 SEAVTLLVAGHETVASALTWSFLLLSHRPDWQKR------------------VAESEEAA 254
Query: 356 DKVTKEALRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPEYYPDPEKF 415
+EALR+YP L R +++ L D L GT + + + ++PD E F
Sbjct: 255 LAAFQEALRLYPPAWILTR-RLERPLLLGED-RLPPGTTLVLSPYVTQR--LHFPDGEAF 310
Query: 416 DPERFSPENIESRPHYTYLPFGDGPRNCIGK 446
PERF E P Y PFG G R C+G+
Sbjct: 311 RPERFLEER--GTPSGRYFPFGLGQRLCLGR 339
>pdb|3TK3|A Chain A, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|B Chain B, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|C Chain C, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|D Chain D, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
Length = 476
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 92/392 (23%), Positives = 163/392 (41%), Gaps = 46/392 (11%)
Query: 75 PKLMVTDPELYKYILIKDFDHFVDRGMGELDAKRDPI-AGH-LFLSKGEYWKRLRNKLSP 132
P +++ + + L+ + F RG A DPI G+ + + GE W+ LR
Sbjct: 55 PVVVLCGTDAIREALVDQAEAFSGRGK---IAVVDPIFQGYGVIFANGERWRALRRFSLA 111
Query: 133 T---FTSGKIKYMFPLIKKCSDQLITTIRKQIGESKQMSLEVKDYCARYTTDVIGTTAFG 189
T F GK + + I++ + L+ +RK SK L+ T+++I + FG
Sbjct: 112 TMRDFGMGK-RSVEERIQEEARCLVEELRK----SKGALLDNTLLFHSITSNIICSIVFG 166
Query: 190 IEINSLENPDSEFRQVSLLVMKPSVLQMLKAVLSELIPLIKYLNLKIFDPRISQFFSNLV 249
+ D F + LL + ++ + S++ L LK F Q + NL
Sbjct: 167 ---KRFDYKDPVF--LRLLDLFFQSFSLISSFSSQVFELFSGF-LKYFPGTHRQIYRNLQ 220
Query: 250 KTNL---SYREKNNIKRD-----DFLNIMMQLQIAQRGKTLSPDDVEMTDDVITAQSFVF 301
+ N EK+ D DF+++ L ++ K+ + + ++T S
Sbjct: 221 EINTFIGQSVEKHRATLDPSNPRDFIDVY--LLRMEKDKSDPSSEFHHQNLILTVLSL-- 276
Query: 302 FFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSYLDKVTKE 361
FF G ET+S+ L + + + P + ++++EI + KM Y D V E
Sbjct: 277 FFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHRPPALDDRAKMPYTDAVIHE 336
Query: 362 ALRMYPSLPQLDRISVKK------YKLP-NTDLTLDVGTKISIPTFAIHYDPEYYPDPEK 414
R+ +P +V K Y +P NT++ + + A+H DP Y+ P
Sbjct: 337 IQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEV-------FPVLSSALH-DPRYFETPNT 388
Query: 415 FDPERFSPENIESRPHYTYLPFGDGPRNCIGK 446
F+P F N + + ++PF G R C G+
Sbjct: 389 FNPGHFLDANGALKRNEGFMPFSLGKRICAGE 420
>pdb|3EQM|A Chain A, Crystal Structure Of Human Placental Aromatase Cytochrome
P450 In Complex With Androstenedione
pdb|3S79|A Chain A, Human Placental Aromatase Cytochrome P450 (Cyp19a1)
Refined At 2.75 Angstrom
pdb|3S7S|A Chain A, Crystal Structure Of Human Placental Aromatase Complexed
With Breast Cancer Drug Exemestane
pdb|4GL5|A Chain A, Structure Of Human Placental Aromatase Complexed With
Designed Inhibitor Hddg029 (Compound 4)
pdb|4GL7|A Chain A, Structure Of Human Placental Aromatase Complexed With
Designed Inhibitor Hddg046 (Compound 5)
Length = 503
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 71/140 (50%), Gaps = 8/140 (5%)
Query: 307 ETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSYLDKVTKEALRMY 366
+T S L F L+ +A++P+++ + +EI T E ++ + K+ ++ E++R
Sbjct: 309 DTMSVSLFFMLFLIAKHPNVEEAIIKEI-QTVIGERDIKIDDIQKLKVMENFIYESMRYQ 367
Query: 367 PSLPQLDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPEYYPDPEKFDPERFSPENIE 426
P + + R +++ + + GT I + +H E++P P +F E F+ +
Sbjct: 368 PVVDLVMRKALEDDVIDG--YPVKKGTNIILNIGRMH-RLEFFPKPNEFTLENFA----K 420
Query: 427 SRPHYTYLPFGDGPRNCIGK 446
+ P+ + PFG GPR C GK
Sbjct: 421 NVPYRYFQPFGFGPRGCAGK 440
>pdb|2WHW|A Chain A, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
pdb|2WHW|B Chain B, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
pdb|2WI9|A Chain A, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
pdb|2WI9|B Chain B, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
Length = 436
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/213 (21%), Positives = 80/213 (37%), Gaps = 52/213 (24%)
Query: 241 ISQFFSNLVKTNLSYREKNNIKRDDFLNIMMQLQIAQRGKTLSPDDVEMTDDVITAQSFV 300
+S + S L+ + K +D L+ ++ +T D +T + + + +
Sbjct: 214 MSGYLSRLIDS------KRGQDGEDLLSALV--------RTSDEDGSRLTSEELLGMAHI 259
Query: 301 FFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSYLDKVTK 360
G+ET+ +++ +Y L +PD + LR + M+ LD +
Sbjct: 260 LLVAGHETTVNLIANGMYALLSHPDQLAALRAD------------------MTLLDGAVE 301
Query: 361 EALRMYPSLPQLDRISVKKYKLPNTDLTLD-----VGTKISIPTFAIHYDPEYYPDPEKF 415
E LR + Y+ P + LD G + + H PE +PDP +F
Sbjct: 302 EMLRYEGP------VESATYRFPVEPVDLDGTVIPAGDTVLVVLADAHRTPERFPDPHRF 355
Query: 416 DPERFSPENIESRPHYTYLPFGDGPRNCIGKIL 448
D R + +L FG G CIG L
Sbjct: 356 DIRRDT---------AGHLAFGHGIHFCIGAPL 379
>pdb|2VZ7|A Chain A, Crystal Structure Of The Yc-17-Bound Pikc D50n Mutant
pdb|2VZ7|B Chain B, Crystal Structure Of The Yc-17-Bound Pikc D50n Mutant
pdb|2VZM|A Chain A, Crystal Structure Of The Narbomycin-Bound Pikc D50n Mutant
pdb|2VZM|B Chain B, Crystal Structure Of The Narbomycin-Bound Pikc D50n Mutant
Length = 436
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/213 (21%), Positives = 80/213 (37%), Gaps = 52/213 (24%)
Query: 241 ISQFFSNLVKTNLSYREKNNIKRDDFLNIMMQLQIAQRGKTLSPDDVEMTDDVITAQSFV 300
+S + S L+ + K +D L+ ++ +T D +T + + + +
Sbjct: 214 MSGYLSRLIDS------KRGQDGEDLLSALV--------RTSDEDGSRLTSEELLGMAHI 259
Query: 301 FFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSYLDKVTK 360
G+ET+ +++ +Y L +PD + LR + M+ LD +
Sbjct: 260 LLVAGHETTVNLIANGMYALLSHPDQLAALRAD------------------MTLLDGAVE 301
Query: 361 EALRMYPSLPQLDRISVKKYKLPNTDLTLD-----VGTKISIPTFAIHYDPEYYPDPEKF 415
E LR + Y+ P + LD G + + H PE +PDP +F
Sbjct: 302 EMLRYEGP------VESATYRFPVEPVDLDGTVIPAGDTVLVVLADAHRTPERFPDPHRF 355
Query: 416 DPERFSPENIESRPHYTYLPFGDGPRNCIGKIL 448
D R + +L FG G CIG L
Sbjct: 356 DIRRDT---------AGHLAFGHGIHFCIGAPL 379
>pdb|2BVJ|A Chain A, Ligand-Free Structure Of Cytochrome P450 Pikc (Cyp107l1)
pdb|2BVJ|B Chain B, Ligand-Free Structure Of Cytochrome P450 Pikc (Cyp107l1)
pdb|2C6H|A Chain A, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2C6H|B Chain B, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2C7X|A Chain A, Crystal Structure Of Narbomycin-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CA0|A Chain A, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CA0|B Chain B, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CD8|A Chain A, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CD8|B Chain B, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
Length = 436
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/213 (21%), Positives = 80/213 (37%), Gaps = 52/213 (24%)
Query: 241 ISQFFSNLVKTNLSYREKNNIKRDDFLNIMMQLQIAQRGKTLSPDDVEMTDDVITAQSFV 300
+S + S L+ + K +D L+ ++ +T D +T + + + +
Sbjct: 214 MSGYLSRLIDS------KRGQDGEDLLSALV--------RTSDEDGSRLTSEELLGMAHI 259
Query: 301 FFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSYLDKVTK 360
G+ET+ +++ +Y L +PD + LR + M+ LD +
Sbjct: 260 LLVAGHETTVNLIANGMYALLSHPDQLAALRAD------------------MTLLDGAVE 301
Query: 361 EALRMYPSLPQLDRISVKKYKLPNTDLTLD-----VGTKISIPTFAIHYDPEYYPDPEKF 415
E LR + Y+ P + LD G + + H PE +PDP +F
Sbjct: 302 EMLRYEGP------VESATYRFPVEPVDLDGTVIPAGDTVLVVLADAHRTPERFPDPHRF 355
Query: 416 DPERFSPENIESRPHYTYLPFGDGPRNCIGKIL 448
D R + +L FG G CIG L
Sbjct: 356 DIRRDT---------AGHLAFGHGIHFCIGAPL 379
>pdb|4H1N|A Chain A, Crystal Structure Of P450 2b4 F297a Mutant In Complex With
Anti- Platelet Drug Clopidogrel
Length = 479
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 91/392 (23%), Positives = 163/392 (41%), Gaps = 46/392 (11%)
Query: 75 PKLMVTDPELYKYILIKDFDHFVDRGMGELDAKRDPI-AGH-LFLSKGEYWKRLRNKLSP 132
P +++ + + L+ + F RG A DPI G+ + + GE W+ LR
Sbjct: 55 PVVVLCGTDAIREALVDQAEAFSGRGK---IAVVDPIFQGYGVIFANGERWRALRRFSLA 111
Query: 133 T---FTSGKIKYMFPLIKKCSDQLITTIRKQIGESKQMSLEVKDYCARYTTDVIGTTAFG 189
T F GK + + I++ + L+ +RK SK L+ T+++I + FG
Sbjct: 112 TMRDFGMGK-RSVEERIQEEARCLVEELRK----SKGALLDNTLLFHSITSNIICSIVFG 166
Query: 190 IEINSLENPDSEFRQVSLLVMKPSVLQMLKAVLSELIPLIKYLNLKIFDPRISQFFSNLV 249
+ D F + LL + ++ + S++ L LK F Q + NL
Sbjct: 167 ---KRFDYKDPVF--LRLLDLFFQSFSLISSFSSQVFELFSGF-LKYFPGTHRQIYRNLQ 220
Query: 250 KTNL---SYREKNNIKRD-----DFLNIMMQLQIAQRGKTLSPDDVEMTDDVITAQSFVF 301
+ N EK+ D DF+++ L ++ K+ + + ++T S
Sbjct: 221 EINTFIGQSVEKHRATLDPSNPRDFIDVY--LLRMEKDKSDPSSEFHHQNLILTVLSL-- 276
Query: 302 FFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSYLDKVTKE 361
F G ET+S+ L + + + P + ++++EI + KM Y D V E
Sbjct: 277 FAAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHRPPALDDRAKMPYTDAVIHE 336
Query: 362 ALRMYPSLPQLDRISVKK------YKLP-NTDLTLDVGTKISIPTFAIHYDPEYYPDPEK 414
R+ +P +V K Y +P NT++ + + A+H DP Y+ P
Sbjct: 337 IQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEV-------FPVLSSALH-DPRYFETPNT 388
Query: 415 FDPERFSPENIESRPHYTYLPFGDGPRNCIGK 446
F+P F N + + ++PF G R C+G+
Sbjct: 389 FNPGHFLDANGALKRNEGFMPFSLGKRICLGE 420
>pdb|3PM0|A Chain A, Structural Characterization Of The Complex Between Alpha-
Naphthoflavone And Human Cytochrome P450 1b1 (Cyp1b1)
Length = 507
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 67/155 (43%), Gaps = 15/155 (9%)
Query: 302 FFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSYLDKVTKE 361
F +T S+ L + L R PD+Q++++ E+ ++ + Y+ E
Sbjct: 288 FGASQDTLSTALQWLLLLFTRYPDVQTRVQAELDQVVGRDRLPCMGDQPNLPYVLAFLYE 347
Query: 362 ALRMYPSLP------QLDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPEYYPDPEKF 415
A+R +P SV Y +P T + + +++++DP +P+PE F
Sbjct: 348 AMRFSSFVPVTIPHATTANTSVLGYHIPKD-------TVVFVNQWSVNHDPLKWPNPENF 400
Query: 416 DPERFSPEN--IESRPHYTYLPFGDGPRNCIGKIL 448
DP RF ++ I + F G R CIG+ L
Sbjct: 401 DPARFLDKDGLINKDLTSRVMIFSVGKRRCIGEEL 435
>pdb|1ODO|A Chain A, 1.85 A Structure Of Cyp154a1 From Streptomyces Coelicolor
A3(2)
Length = 408
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 78/185 (42%), Gaps = 41/185 (22%)
Query: 270 MMQLQIAQR-----GKTLSPDDVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNP 324
M L IA R G LSP+ E+ D ++ + GYET+ +V+ ++ L P
Sbjct: 210 MTSLLIAARDDEGDGDRLSPE--ELRDTLL-----LMISAGYETTVNVIDQAVHTLLTRP 262
Query: 325 DIQSKLRQEIMATKKKEGELTYEICHKMSYLDKVTKEALRMYPSLPQLD-RISVKKYKLP 383
D + +R+ GE+T+ V +E LR P++ L R +V LP
Sbjct: 263 DQLALVRK---------GEVTWA---------DVVEETLRHEPAVKHLPLRYAVTDIALP 304
Query: 384 NTDLTLDVGTKISIPTFAIHYDPEYYPDPEKFDPERFSPENIESRPHYTYLPFGDGPRNC 443
+ T+ G I A + P+++ D + FD R E +L FG G C
Sbjct: 305 DGR-TIARGEPILASYAAANRHPDWHEDADTFDATRTVKE---------HLAFGHGVHFC 354
Query: 444 IGKIL 448
+G L
Sbjct: 355 LGAPL 359
>pdb|3QM4|A Chain A, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3QM4|B Chain B, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3TBG|A Chain A, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|B Chain B, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|C Chain C, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|D Chain D, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TDA|A Chain A, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|B Chain B, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|C Chain C, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|D Chain D, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
Length = 479
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 71/160 (44%), Gaps = 25/160 (15%)
Query: 301 FFFGGYETSSSVLTFCLYELARNPDIQSKLRQEI--MATKKKEGELTYEICHKMSYLDKV 358
F G T+S+ L + L + +PD+Q +++QEI + + + E+ + M Y V
Sbjct: 280 LFSAGMVTTSTTLAWGLLLMILHPDVQRRVQQEIDDVIGQVRRPEMGDQA--HMPYTTAV 337
Query: 359 TKEALRMYPSLP------QLDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPEYYPDP 412
E R +P I V+ +++P GT + ++ D + P
Sbjct: 338 IHEVQRFGDIVPLGVTHMTSRDIEVQGFRIPK-------GTTLITNLSSVLKDEAVWEKP 390
Query: 413 EKFDPERFSPENIESRPHY----TYLPFGDGPRNCIGKIL 448
+F PE F ++++ H+ +LPF G R C+G+ L
Sbjct: 391 FRFHPEHF----LDAQGHFVKPEAFLPFSAGRRACLGEPL 426
>pdb|2F9Q|A Chain A, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|B Chain B, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|C Chain C, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|D Chain D, Crystal Structure Of Human Cytochrome P450 2d6
Length = 479
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 71/159 (44%), Gaps = 25/159 (15%)
Query: 302 FFGGYETSSSVLTFCLYELARNPDIQSKLRQEI--MATKKKEGELTYEICHKMSYLDKVT 359
F G T+S+ L + L + +PD+Q +++QEI + + + E+ + M Y V
Sbjct: 281 FSAGMVTTSTTLAWGLLLMILHPDVQRRVQQEIDDVIGQVRRPEMGDQA--HMPYTTAVI 338
Query: 360 KEALRMYPSLP------QLDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPEYYPDPE 413
E R +P I V+ +++P GT + ++ D + P
Sbjct: 339 HEVQRFGDIVPLGMTHMTSRDIEVQGFRIPK-------GTTLITNLSSVLKDEAVWEKPF 391
Query: 414 KFDPERFSPENIESRPHY----TYLPFGDGPRNCIGKIL 448
+F PE F ++++ H+ +LPF G R C+G+ L
Sbjct: 392 RFHPEHF----LDAQGHFVKPEAFLPFSAGRRACLGEPL 426
>pdb|3MGX|A Chain A, Crystal Structure Of P450 Oxyd That Is Involved In The
Biosynthesis Of Vancomycin-Type Antibiotics
pdb|3MGX|B Chain B, Crystal Structure Of P450 Oxyd That Is Involved In The
Biosynthesis Of Vancomycin-Type Antibiotics
Length = 415
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 67/169 (39%), Gaps = 30/169 (17%)
Query: 280 KTLSPDDVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKK 339
TL DD DDV+ V GG ET+ +T ++ LA P + + LR
Sbjct: 231 STLVTDDDLTIDDVLLNCDNVLI-GGNETTRHAITGAVHALATVPGLLTALRD------- 282
Query: 340 KEGELTYEICHKMSYLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKISIPT 399
+ +D V +E LR + R++ + DL GT +
Sbjct: 283 -----------GSADVDTVVEEVLRWTSPAMHVLRVTTADVTINGRDLP--SGTPVVAWL 329
Query: 400 FAIHYDPEYYPDPEKFDPERFSPENIESRPHYTYLPFGDGPRNCIGKIL 448
A + DP + DP+ F P R +P+ ++ FG G +C+G L
Sbjct: 330 PAANRDPAEFDDPDTFLPGR--------KPNR-HITFGHGMHHCLGSAL 369
>pdb|4EP6|A Chain A, Crystal Structure Of The Xpla Heme Domain In Complex With
Imidazole And Peg
Length = 392
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 65/303 (21%), Positives = 113/303 (37%), Gaps = 49/303 (16%)
Query: 155 TTIRKQIGESKQMSLEVKDYCARYTTDVIGTTAFGIEINSLENPDSEFRQVSLLVMKPSV 214
T +R+Q +K + ++ D R T +++G G+E + + V V V
Sbjct: 86 TVLRRQT--NKWFTPKLVDGWVRTTRELVGDLLDGVEAGQVIEARRDLAVVPTHVTMARV 143
Query: 215 LQM----LKAVLSELIPLIKYLNLKIFDP---RISQFFSNLVKTNLSYREKNNIKRDDFL 267
LQ+ AV+ + + + + D R + F L E + D L
Sbjct: 144 LQLPEDDADAVMEAMFEAMLMQSAEPADGDVDRAAVAFGYLSARVAEMLEDKRVNPGDGL 203
Query: 268 NIMMQLQIAQRGKTLSPDDVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQ 327
+ L A+ G E+T+ A VF+ G+ ++ + AR P++
Sbjct: 204 ADSL-LDAARAG--------EITESEAIATILVFYAVGHMAIGYLIASGIELFARRPEVF 254
Query: 328 SKLRQEIMATKKKEGELTYEICHKMSYLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDL 387
+ R + A + E +RM P PQL + + +
Sbjct: 255 TAFRNDESARAA------------------IINEMVRMDP--PQLSFLRFPTEDVEIGGV 294
Query: 388 TLDVGTKISIPTFAIHYDPEYYPDPEKFDPERFSPENIESRPHYTY--LPFGDGPRNCIG 445
++ G+ I A + DPE + DP+ FD +RP L FG GP +C G
Sbjct: 295 LIEAGSPIRFMIGAANRDPEVFDDPDVFD---------HTRPPAASRNLSFGLGPHSCAG 345
Query: 446 KIL 448
+I+
Sbjct: 346 QII 348
>pdb|2WIV|A Chain A, Cytochrome-P450 Xpla Heme Domain P21
pdb|2WIV|B Chain B, Cytochrome-P450 Xpla Heme Domain P21
pdb|2WIY|A Chain A, Cytochrome P450 Xpla Heme Domain P21212
Length = 394
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 65/303 (21%), Positives = 113/303 (37%), Gaps = 49/303 (16%)
Query: 155 TTIRKQIGESKQMSLEVKDYCARYTTDVIGTTAFGIEINSLENPDSEFRQVSLLVMKPSV 214
T +R+Q +K + ++ D R T +++G G+E + + V V V
Sbjct: 88 TVLRRQT--NKWFTPKLVDGWVRTTRELVGDLLDGVEAGQVIEARRDLAVVPTHVTMARV 145
Query: 215 LQM----LKAVLSELIPLIKYLNLKIFDP---RISQFFSNLVKTNLSYREKNNIKRDDFL 267
LQ+ AV+ + + + + D R + F L E + D L
Sbjct: 146 LQLPEDDADAVMEAMFEAMLMQSAEPADGDVDRAAVAFGYLSARVAEMLEDKRVNPGDGL 205
Query: 268 NIMMQLQIAQRGKTLSPDDVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQ 327
+ L A+ G E+T+ A VF+ G+ ++ + AR P++
Sbjct: 206 ADSL-LDAARAG--------EITESEAIATILVFYAVGHMAIGYLIASGIELFARRPEVF 256
Query: 328 SKLRQEIMATKKKEGELTYEICHKMSYLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDL 387
+ R + A + E +RM P PQL + + +
Sbjct: 257 TAFRNDESARAA------------------IINEMVRMDP--PQLSFLRFPTEDVEIGGV 296
Query: 388 TLDVGTKISIPTFAIHYDPEYYPDPEKFDPERFSPENIESRPHYTY--LPFGDGPRNCIG 445
++ G+ I A + DPE + DP+ FD +RP L FG GP +C G
Sbjct: 297 LIEAGSPIRFMIGAANRDPEVFDDPDVFD---------HTRPPAASRNLSFGLGPHSCAG 347
Query: 446 KIL 448
+I+
Sbjct: 348 QII 350
>pdb|1UE8|A Chain A, Crystal Structure Of Thermophilic Cytochrome P450 From
Sulfolobus Tokodaii
pdb|3B4X|A Chain A, Crystal Structure Analysis Of Sulfolobus Tokodaii Strain7
Cytochrom P450
Length = 367
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 43/89 (48%), Gaps = 11/89 (12%)
Query: 357 KVTKEALRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPEYYPDPEKFD 416
K +EALR P P + I V K K+ D +D G + + + + D E + DP+ F
Sbjct: 242 KAVEEALRFSP--PVMRTIRVTKEKVKIRDQVIDEGELVRVWIASANRDEEVFKDPDSFI 299
Query: 417 PERFSPENIESRPHYTYLPFGDGPRNCIG 445
P+R +P PH L FG G C+G
Sbjct: 300 PDR-TPN-----PH---LSFGSGIHLCLG 319
>pdb|3TKT|A Chain A, Crystal Structure Of Cyp108d1 From Novosphingobium
Aromaticivorans Dsm12444
Length = 450
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/156 (21%), Positives = 59/156 (37%), Gaps = 11/156 (7%)
Query: 290 TDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEIC 349
TDDV T + G + + + + D S ++ +L +
Sbjct: 257 TDDVATVIANAVVDGEPMSDRDTAGYYIITASAGHDTTSASSAGAALALARDPDLFARVK 316
Query: 350 HKMSYLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPEYY 409
+ L + +EA+R + R + +L + G + + A ++DP +
Sbjct: 317 ADRNLLPGIVEEAIRWTTPVQHFMRTAATDTELCGQKIA--AGDWLMLNYVAANHDPAQF 374
Query: 410 PDPEKFDPERFSPENIESRPHYTYLPFGDGPRNCIG 445
P+P KFDP +RP +L FG G C+G
Sbjct: 375 PEPRKFDP---------TRPANRHLAFGAGSHQCLG 401
>pdb|2D09|A Chain A, A Role For Active Site Water Molecules And Hydroxyl Groups
Of Substrate For Oxygen Activation In Cytochrome P450
158a2
Length = 407
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 74/171 (43%), Gaps = 32/171 (18%)
Query: 279 GKTLSPDDVEMTDDVITAQSFVFFFGGYE-TSSSVLTFCLYELARNPDIQSKLRQEIMAT 337
G + D++ +++ V A + GG T++S F L L P++ +LR E
Sbjct: 219 GAAVGRDEITLSEAVGLA--VLLQIGGEAVTNNSGQMFHL--LLSRPELAERLRSEPEIR 274
Query: 338 KKKEGELTYEICHKMSYLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKISI 397
+ EL I H+ + L RI+++ ++ + + G + +
Sbjct: 275 PRAIDELLRWIPHRNAV----------------GLSRIALEDVEI--KGVRIRAGDAVYV 316
Query: 398 PTFAIHYDPEYYPDPEKFDPERFSPENIESRPHYTYLPFGDGPRNCIGKIL 448
A + DPE +PDP++ D ER SP PH + FG GP C G +L
Sbjct: 317 SYLAANRDPEVFPDPDRIDFER-SPN-----PHVS---FGFGPHYCPGGML 358
>pdb|1SE6|A Chain A, Crystal Structure Of Streptomyces Coelicolor A3(2)
Cyp158a2 From Antibiotic Biosynthetic Pathways
pdb|1SE6|B Chain B, Crystal Structure Of Streptomyces Coelicolor A3(2)
Cyp158a2 From Antibiotic Biosynthetic Pathways
Length = 406
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 74/171 (43%), Gaps = 32/171 (18%)
Query: 279 GKTLSPDDVEMTDDVITAQSFVFFFGGYE-TSSSVLTFCLYELARNPDIQSKLRQEIMAT 337
G + D++ +++ V A + GG T++S F L L P++ +LR E
Sbjct: 219 GAAVGRDEITLSEAVGLA--VLLQIGGEAVTNNSGQMFHL--LLSRPELAERLRSEPEIR 274
Query: 338 KKKEGELTYEICHKMSYLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKISI 397
+ EL I H+ + L RI+++ ++ + + G + +
Sbjct: 275 PRAIDELLRWIPHRNAV----------------GLSRIALEDVEI--KGVRIRAGDAVYV 316
Query: 398 PTFAIHYDPEYYPDPEKFDPERFSPENIESRPHYTYLPFGDGPRNCIGKIL 448
A + DPE +PDP++ D ER SP PH + FG GP C G +L
Sbjct: 317 SYLAANRDPEVFPDPDRIDFER-SPN-----PHVS---FGFGPHYCPGGML 358
>pdb|3TZO|A Chain A, The Role Of I87 Of Cyp158a2 In Oxidative Coupling Reaction
pdb|3TZO|B Chain B, The Role Of I87 Of Cyp158a2 In Oxidative Coupling Reaction
Length = 410
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 74/171 (43%), Gaps = 32/171 (18%)
Query: 279 GKTLSPDDVEMTDDVITAQSFVFFFGGYE-TSSSVLTFCLYELARNPDIQSKLRQEIMAT 337
G + D++ +++ V A + GG T++S F L L P++ +LR E
Sbjct: 219 GAAVGRDEITLSEAVGLA--VLLQIGGEAVTNNSGQMFHL--LLSRPELAERLRSEPEIR 274
Query: 338 KKKEGELTYEICHKMSYLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKISI 397
+ EL I H+ + L RI+++ ++ + + G + +
Sbjct: 275 PRAIDELLRWIPHRNAV----------------GLSRIALEDVEI--KGVRIRAGDAVYV 316
Query: 398 PTFAIHYDPEYYPDPEKFDPERFSPENIESRPHYTYLPFGDGPRNCIGKIL 448
A + DPE +PDP++ D ER SP PH + FG GP C G +L
Sbjct: 317 SYLAANRDPEVFPDPDRIDFER-SPN-----PHVS---FGFGPHYCPGGML 358
>pdb|1T93|A Chain A, Evidence For Multiple Substrate Recognition And Molecular
Mechanism Of C-C Reaction By Cytochrome P450 Cyp158a2
From Streptomyces Coelicolor A3(2)
Length = 406
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 74/171 (43%), Gaps = 32/171 (18%)
Query: 279 GKTLSPDDVEMTDDVITAQSFVFFFGGYE-TSSSVLTFCLYELARNPDIQSKLRQEIMAT 337
G + D++ +++ V A + GG T++S F L L P++ +LR E
Sbjct: 219 GAAVGRDEITLSEAVGLA--VLLQIGGEAVTNNSGQMFHL--LLSRPELAERLRSEPEIR 274
Query: 338 KKKEGELTYEICHKMSYLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKISI 397
+ EL I H+ + L RI+++ ++ + + G + +
Sbjct: 275 PRAIDELLRWIPHRNAV----------------GLSRIALEDVEI--KGVRIRAGDAVYV 316
Query: 398 PTFAIHYDPEYYPDPEKFDPERFSPENIESRPHYTYLPFGDGPRNCIGKIL 448
A + DPE +PDP++ D ER SP PH + FG GP C G +L
Sbjct: 317 SYLAANRDPEVFPDPDRIDFER-SPN-----PHVS---FGFGPHYCPGGML 358
>pdb|2D0E|A Chain A, Substrate Assited In Oxygen Activation In Cytochrome P450
158a2
Length = 407
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 74/171 (43%), Gaps = 32/171 (18%)
Query: 279 GKTLSPDDVEMTDDVITAQSFVFFFGGYE-TSSSVLTFCLYELARNPDIQSKLRQEIMAT 337
G + D++ +++ V A + GG T++S F L L P++ +LR E
Sbjct: 219 GAAVGRDEITLSEAVGLA--VLLQIGGEAVTNNSGQMFHL--LLSRPELAERLRSEPEIR 274
Query: 338 KKKEGELTYEICHKMSYLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKISI 397
+ EL I H+ + L RI+++ ++ + + G + +
Sbjct: 275 PRAIDELLRWIPHRNAV----------------GLSRIALEDVEI--KGVRIRAGDAVYV 316
Query: 398 PTFAIHYDPEYYPDPEKFDPERFSPENIESRPHYTYLPFGDGPRNCIGKIL 448
A + DPE +PDP++ D ER SP PH + FG GP C G +L
Sbjct: 317 SYLAANRDPEVFPDPDRIDFER-SPN-----PHVS---FGFGPHYCPGGML 358
>pdb|1S1F|A Chain A, Crystal Structure Of Streptomyces Coelicolor A3(2)
Cyp158a2 From Antibiotic Biosynthetic Pathways
Length = 406
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 74/171 (43%), Gaps = 32/171 (18%)
Query: 279 GKTLSPDDVEMTDDVITAQSFVFFFGGYE-TSSSVLTFCLYELARNPDIQSKLRQEIMAT 337
G + D++ +++ V A + GG T++S F L L P++ +LR E
Sbjct: 219 GAAVGRDEITLSEAVGLA--VLLQIGGEAVTNNSGQMFHL--LLSRPELAERLRSEPEIR 274
Query: 338 KKKEGELTYEICHKMSYLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKISI 397
+ EL I H+ + L RI+++ ++ + + G + +
Sbjct: 275 PRAIDELLRWIPHRNAV----------------GLSRIALEDVEI--KGVRIRAGDAVYV 316
Query: 398 PTFAIHYDPEYYPDPEKFDPERFSPENIESRPHYTYLPFGDGPRNCIGKIL 448
A + DPE +PDP++ D ER SP PH + FG GP C G +L
Sbjct: 317 SYLAANRDPEVFPDPDRIDFER-SPN-----PHVS---FGFGPHYCPGGML 358
>pdb|3TNK|A Chain A, Crystal Structure Of Mutant I87r In Cyp158a2
pdb|3TNK|B Chain B, Crystal Structure Of Mutant I87r In Cyp158a2
Length = 407
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 74/171 (43%), Gaps = 32/171 (18%)
Query: 279 GKTLSPDDVEMTDDVITAQSFVFFFGGYE-TSSSVLTFCLYELARNPDIQSKLRQEIMAT 337
G + D++ +++ V A + GG T++S F L L P++ +LR E
Sbjct: 219 GAAVGRDEITLSEAVGLA--VLLQIGGEAVTNNSGQMFHL--LLSRPELAERLRSEPEIR 274
Query: 338 KKKEGELTYEICHKMSYLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKISI 397
+ EL I H+ + L RI+++ ++ + + G + +
Sbjct: 275 PRAIDELLRWIPHRNAV----------------GLSRIALEDVEI--KGVRIRAGDAVYV 316
Query: 398 PTFAIHYDPEYYPDPEKFDPERFSPENIESRPHYTYLPFGDGPRNCIGKIL 448
A + DPE +PDP++ D ER SP PH + FG GP C G +L
Sbjct: 317 SYLAANRDPEVFPDPDRIDFER-SPN-----PHVS---FGFGPHYCPGGML 358
>pdb|2JJN|A Chain A, Structure Of Closed Cytochrome P450 Eryk
pdb|2JJO|A Chain A, Structure Of Cytochrome P450 Eryk In Complex With Its
Natural Substrate Erd
pdb|2JJP|A Chain A, Structure Of Cytochrome P450 Eryk In Complex With
Inhibitor Ketoconazole (Kc)
pdb|2XFH|A Chain A, Structure Of Cytochrome P450 Eryk Cocrystallized With
Inhibitor Clotrimazole
Length = 411
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 42/92 (45%), Gaps = 9/92 (9%)
Query: 357 KVTKEALRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPEYYPDPEKFD 416
+ +E LR P PQ+ R + K ++ + DV ++ + + D + + DP++FD
Sbjct: 276 AIVEEVLRYRPPFPQMQRTTTKATEVAGVPIPADV--MVNTWVLSANRDSDAHDDPDRFD 333
Query: 417 PERFSPENIESRPHYTYLPFGDGPRNCIGKIL 448
P R S + L FG G C+G L
Sbjct: 334 PSRKSGGAAQ-------LSFGHGVHFCLGAPL 358
>pdb|2VRV|A Chain A, Structure Of Histidine Tagged Cytochrome P450 Eryk In
Complex With Inhibitor Clotrimazole (Clt)
pdb|2WIO|A Chain A, Structure Of The Histidine Tagged, Open Cytochrome P450
Eryk From S. Erythraea
Length = 431
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 42/92 (45%), Gaps = 9/92 (9%)
Query: 357 KVTKEALRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPEYYPDPEKFD 416
+ +E LR P PQ+ R + K ++ + DV ++ + + D + + DP++FD
Sbjct: 296 AIVEEVLRYRPPFPQMQRTTTKATEVAGVPIPADV--MVNTWVLSANRDSDAHDDPDRFD 353
Query: 417 PERFSPENIESRPHYTYLPFGDGPRNCIGKIL 448
P R S + L FG G C+G L
Sbjct: 354 PSRKSGGAAQ-------LSFGHGVHFCLGAPL 378
>pdb|3B6H|A Chain A, Crystal Structure Of Human Prostacyclin Synthase In
Complex With Inhibitor Minoxidil
pdb|3B6H|B Chain B, Crystal Structure Of Human Prostacyclin Synthase In
Complex With Inhibitor Minoxidil
Length = 498
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 64/145 (44%), Gaps = 21/145 (14%)
Query: 322 RNPDIQSKLRQEIMATKKKEGE-------LTYEICHKMSYLDKVTKEALRMYPSLPQLDR 374
+NP+ + +R E+ + + + L ++ LD V E+LR+ + P + R
Sbjct: 291 KNPEALAAVRGELESILWQAEQPVSQTTTLPQKVLDSTPVLDSVLSESLRLTAA-PFITR 349
Query: 375 ISVKKYKLPNTD---LTLDVGTKISI-PTFAIHYDPEYYPDPEKFDPERF-SPENIESRP 429
V +P D L G ++ + P + DPE Y DPE F RF +P+ E +
Sbjct: 350 EVVVDLAMPMADGREFNLRRGDRLLLFPFLSPQRDPEIYTDPEVFKYNRFLNPDGSEKKD 409
Query: 430 HYT--------YLPFGDGPRNCIGK 446
Y +P+G G +C+G+
Sbjct: 410 FYKDGKRLKNYNMPWGAGHNHCLGR 434
>pdb|2XKR|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Cyp142: A
Novel Cholesterol Oxidase
Length = 398
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/204 (20%), Positives = 84/204 (41%), Gaps = 40/204 (19%)
Query: 245 FSNLVKTNLSYREKNNIKRDDFLNIMMQLQIAQRGKTLSPDDVEMTDDVITAQSFVFFFG 304
+++ + ++ R + DD +++++ ++ D ++DD + ++ + G
Sbjct: 182 YNDFTRATIAARRADPT--DDLVSVLVSSEV---------DGERLSDDELVMETLLILIG 230
Query: 305 GYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSYLDKVTKEALR 364
G ET+ L+ +L RN D L+++ S L +E LR
Sbjct: 231 GDETTRHTLSGGTEQLLRNRDQWDLLQRDP------------------SLLPGAIEEMLR 272
Query: 365 MYPSLPQLDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPEYYPDPEKFDPERFSPEN 424
+ + R+ + T L G K+ + + ++D + +PEKFD +R
Sbjct: 273 WTAPVKNMCRVLTADTEFHGTALC--AGEKMMLLFESANFDEAVFCEPEKFDVQR----- 325
Query: 425 IESRPHYTYLPFGDGPRNCIGKIL 448
P+ ++L FG G C+G L
Sbjct: 326 ---NPN-SHLAFGFGTHFCLGNQL 345
>pdb|2IAG|A Chain A, Crystal Structure Of Human Prostacyclin Synthase
pdb|2IAG|B Chain B, Crystal Structure Of Human Prostacyclin Synthase
Length = 482
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 64/145 (44%), Gaps = 21/145 (14%)
Query: 322 RNPDIQSKLRQEIMATKKKEGE-------LTYEICHKMSYLDKVTKEALRMYPSLPQLDR 374
+NP+ + +R E+ + + + L ++ LD V E+LR+ + P + R
Sbjct: 279 KNPEALAAVRGELESILWQAEQPVSQTTTLPQKVLDSTPVLDSVLSESLRLTAA-PFITR 337
Query: 375 ISVKKYKLPNTD---LTLDVGTKISI-PTFAIHYDPEYYPDPEKFDPERF-SPENIESRP 429
V +P D L G ++ + P + DPE Y DPE F RF +P+ E +
Sbjct: 338 EVVVDLAMPMADGREFNLRRGDRLLLFPFLSPQRDPEIYTDPEVFKYNRFLNPDGSEKKD 397
Query: 430 HYT--------YLPFGDGPRNCIGK 446
Y +P+G G +C+G+
Sbjct: 398 FYKDGKRLKNYNMPWGAGHNHCLGR 422
>pdb|2Z36|A Chain A, Crystal Structure Of Cytochrome P450 Moxa From Nonomuraea
Recticatena (Cyp105)
pdb|2Z36|B Chain B, Crystal Structure Of Cytochrome P450 Moxa From Nonomuraea
Recticatena (Cyp105)
Length = 413
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/151 (19%), Positives = 60/151 (39%), Gaps = 28/151 (18%)
Query: 298 SFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSYLDK 357
+F+ G+ET++++++ + L +P +++ K G + + Y
Sbjct: 239 AFLLLTAGHETTANMISLGVVGLLSHP-------EQLTVVKANPGRTPMAVEELLRYFTI 291
Query: 358 VTKEALRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPEYYPDPEKFDP 417
R+ ++ +S+K G + + + ++DP + DP D
Sbjct: 292 ADGVTSRLATEDVEIGGVSIK------------AGEGVIVSMLSANWDPAVFKDPAVLDV 339
Query: 418 ERFSPENIESRPHYTYLPFGDGPRNCIGKIL 448
ER +R H L FG GP C+G+ L
Sbjct: 340 ER------GARHH---LAFGFGPHQCLGQNL 361
>pdb|3OFU|A Chain A, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFU|B Chain B, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFU|C Chain C, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFU|D Chain D, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFU|E Chain E, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFU|F Chain F, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFT|A Chain A, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFT|B Chain B, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFT|C Chain C, Crystal Structure Of Cytochrome P450 Cyp101c1
Length = 396
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/241 (22%), Positives = 95/241 (39%), Gaps = 46/241 (19%)
Query: 223 SELIPLIKYLNL---KIFD-PRISQFFSNLVKTNLSYR-EKNNIKRDDFLNIMMQLQIAQ 277
+E++PL +L L + D PR+ Q L + + S E+ DD+L ++ ++AQ
Sbjct: 141 AEILPLNIFLTLIDVPLEDRPRLRQLGVQLTRPDGSMTVEQLKQAADDYLWPFIEKRMAQ 200
Query: 278 RGKTL-------SPDDVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKL 330
G L T D FGG +T ++++ LAR+P+ Q L
Sbjct: 201 PGDDLFSRILSEPVGGRPWTVDEARRMCRNLLFGGLDTVAAMIGMVALHLARHPEDQRLL 260
Query: 331 RQEIMATKKKEGELTYEICHKMSYLDKVTKEALRMYPSLPQLDRISVKKYKLPNTD---L 387
R+ + + E +R YP+ ++V + + + D +
Sbjct: 261 RE------------------RPDLIPAAADELMRRYPT------VAVSRNAVADVDADGV 296
Query: 388 TLDVGTKISIPTFAIHYDPEYYPDPEKFDPERFSPENIESRPHYTYLPFGDGPRNCIGKI 447
T+ G + +P+ + DP + PE+ RF + H T G G C+G
Sbjct: 297 TIRKGDLVYLPSVLHNLDPASFEAPEEV---RFD-RGLAPIRHTT---MGVGAHRCVGAG 349
Query: 448 L 448
L
Sbjct: 350 L 350
>pdb|3CXV|A Chain A, Crystal Structure Of The Cytochrome P450 Cyp121 A233g
Mutant From Mycobacterium Tuberculosis
Length = 396
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/162 (21%), Positives = 67/162 (41%), Gaps = 29/162 (17%)
Query: 288 EMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYE 347
++D++ FF GG ++ S LT L L + P +++ L +
Sbjct: 217 HVSDELFATIGVTFFGGGVISTGSFLTTALISLIQRPQLRNLLHE--------------- 261
Query: 348 ICHKMSYLDKVTKEALRMYPSLPQ-LDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDP 406
K + +E LR+ S L R++ ++ D+ + G + + ++DP
Sbjct: 262 ---KPELIPAGVEELLRINLSFADGLPRLATADIQV--GDVLVRKGELVLVLLEGANFDP 316
Query: 407 EYYPDPEKFDPERFSPENIESRPHYTYLPFGDGPRNCIGKIL 448
E++P+P + +R +P ++L FG G C G L
Sbjct: 317 EHFPNPGSIELDRPNP--------TSHLAFGRGQHFCPGSAL 350
>pdb|3CXY|A Chain A, Crystal Structure Of The Cytochrome P450 Cyp121 P346l
Mutant From M. Tuberculosis
Length = 396
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/162 (20%), Positives = 67/162 (41%), Gaps = 29/162 (17%)
Query: 288 EMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYE 347
++D++ FF G ++ S LT L L + P +++ L +
Sbjct: 217 HVSDELFATIGVTFFGAGVISTGSFLTTALISLIQRPQLRNLLHE--------------- 261
Query: 348 ICHKMSYLDKVTKEALRMYPSLPQ-LDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDP 406
K + +E LR+ S L R++ ++ D+ + G + + ++DP
Sbjct: 262 ---KPELIPAGVEELLRINLSFADGLPRLATADIQV--GDVLVRKGELVLVLLEGANFDP 316
Query: 407 EYYPDPEKFDPERFSPENIESRPHYTYLPFGDGPRNCIGKIL 448
E++P+P + +R +P ++L FG G C+G L
Sbjct: 317 EHFPNPGSIELDRPNP--------TSHLAFGRGQHFCLGSAL 350
>pdb|2NZ5|A Chain A, Structure And Function Studies Of Cytochrome P450 158a1
From Streptomyces Coelicolor A3(2)
pdb|2NZ5|B Chain B, Structure And Function Studies Of Cytochrome P450 158a1
From Streptomyces Coelicolor A3(2)
pdb|2NZA|A Chain A, Structure And Function Studies Of Cytochrome P450 158a1
From Streptomyces Coelicolor A3(2)
pdb|2NZA|B Chain B, Structure And Function Studies Of Cytochrome P450 158a1
From Streptomyces Coelicolor A3(2)
Length = 413
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 59/144 (40%), Gaps = 27/144 (18%)
Query: 305 GYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSYLDKVTKEALR 364
G E + + LY L ++ +++R+ A EL I H+ S
Sbjct: 245 GGEAVTHNVGQMLYLLLTRRELMARMRERPGARGTALDELLRWISHRTSV---------- 294
Query: 365 MYPSLPQLDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPEYYPDPEKFDPERFSPEN 424
L RI+++ ++ T + G + + A + DP+ +PDP++ D +R
Sbjct: 295 ------GLARIALEDVEVHGTRIA--AGEPVYVSYLAANRDPDVFPDPDRIDLDR----- 341
Query: 425 IESRPHYTYLPFGDGPRNCIGKIL 448
+ PH Y G+G C G +L
Sbjct: 342 -DPNPHLAY---GNGHHFCTGAVL 361
>pdb|3R9C|A Chain A, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 With
Econazole Bound
pdb|3R9B|A Chain A, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
pdb|3R9B|B Chain B, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
pdb|3R9B|C Chain C, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
Length = 418
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/166 (21%), Positives = 62/166 (37%), Gaps = 39/166 (23%)
Query: 288 EMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYE 347
++T+D I A + G+ET+ +++ + R P + L +
Sbjct: 240 QLTEDEIIATCNLLLIAGHETTVNLIANAALAMLRTPGQWAALAAD-------------- 285
Query: 348 ICHKMSYLDKVTKEALRMYPSLPQLDR-----ISVKKYKLPNTDLTLDVGTKISIPTFAI 402
S V +E +R P + + R +++ + +P D L + A
Sbjct: 286 ----GSRASAVIEETMRYDPPVQLVSRYAGDDLTIGTHTVPKGDTML-------LLLAAA 334
Query: 403 HYDPEYYPDPEKFDPERFSPENIESRPHYTYLPFGDGPRNCIGKIL 448
H DP P++FDP+R +L FG G C+G L
Sbjct: 335 HRDPTIVGAPDRFDPDRA---------QIRHLGFGKGAHFCLGAPL 371
>pdb|2DKK|A Chain A, Structure/function Studies Of Cytochrome P450 158a1 From
Streptomyces Coelicolor A3(2)
Length = 411
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 59/144 (40%), Gaps = 27/144 (18%)
Query: 305 GYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSYLDKVTKEALR 364
G E + + LY L ++ +++R+ A EL I H+ S
Sbjct: 245 GGEAVTHNVGQMLYLLLTRRELMARMRERPGARGTALDELLRWISHRTSV---------- 294
Query: 365 MYPSLPQLDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPEYYPDPEKFDPERFSPEN 424
L RI+++ ++ T + G + + A + DP+ +PDP++ D +R
Sbjct: 295 ------GLARIALEDVEVHGTRIA--AGEPVYVSYLAANRDPDVFPDPDRIDLDR----- 341
Query: 425 IESRPHYTYLPFGDGPRNCIGKIL 448
+ PH Y G+G C G +L
Sbjct: 342 -DPNPHLAY---GNGHHFCTGAVL 361
>pdb|1IO8|A Chain A, Thermophilic Cytochrome P450 (Cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
pdb|1IO8|B Chain B, Thermophilic Cytochrome P450 (Cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
Length = 368
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 66/146 (45%), Gaps = 31/146 (21%)
Query: 300 VFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSYLDKVT 359
+ G ET++++++ + + R ++ ++R+E + YL K
Sbjct: 205 LLLIAGNETTTNLISNSVIDFTRF-NLWQRIREENL------------------YL-KAI 244
Query: 360 KEALRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPEYYPDPEKFDPER 419
+EALR P + + R + ++ KL D T++ G + + + + D E + D EKF P+R
Sbjct: 245 EEALRYSPPVMRTVRKTKERVKL--GDQTIEEGEYVRVWIASANRDEEVFHDGEKFIPDR 302
Query: 420 FSPENIESRPHYTYLPFGDGPRNCIG 445
PH L FG G C+G
Sbjct: 303 ------NPNPH---LSFGSGIHLCLG 319
>pdb|1F4T|A Chain A, Thermophilic P450: Cyp119 From Sulfolobus Solfactaricus
With 4- Phenylimidazole Bound
pdb|1F4T|B Chain B, Thermophilic P450: Cyp119 From Sulfolobus Solfactaricus
With 4- Phenylimidazole Bound
pdb|1F4U|A Chain A, Thermophilic P450: Cyp119 From Sulfolobus Solfactaricus
pdb|1F4U|B Chain B, Thermophilic P450: Cyp119 From Sulfolobus Solfactaricus
pdb|1IO9|A Chain A, Thermophilic Cytochrome P450 (cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
pdb|1IO9|B Chain B, Thermophilic Cytochrome P450 (cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
pdb|1IO7|A Chain A, Thermophilic Cytochrome P450 (Cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
pdb|1IO7|B Chain B, Thermophilic Cytochrome P450 (Cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
Length = 368
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 43/89 (48%), Gaps = 11/89 (12%)
Query: 357 KVTKEALRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPEYYPDPEKFD 416
K +EALR P + + R + ++ KL D T++ G + + + + D E + D EKF
Sbjct: 242 KAIEEALRYSPPVMRTVRKTKERVKL--GDQTIEEGEYVRVWIASANRDEEVFHDGEKFI 299
Query: 417 PERFSPENIESRPHYTYLPFGDGPRNCIG 445
P+R PH L FG G C+G
Sbjct: 300 PDR------NPNPH---LSFGSGIHLCLG 319
>pdb|3RWL|A Chain A, Structure Of P450pyr Hydroxylase
Length = 426
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 36/166 (21%), Positives = 65/166 (39%), Gaps = 28/166 (16%)
Query: 283 SPDDVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEG 342
SP MT + + GG +T+ + +T + L +NPD +KL+
Sbjct: 244 SPATRNMTPEEYLGNVLLLIVGGNDTTRNSMTGGVLALHKNPDQFAKLKA---------- 293
Query: 343 ELTYEICHKMSYLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKISIPTFAI 402
+ ++ + E +R L + R ++ +L T+ G K+ + ++
Sbjct: 294 --------NPALVETMVPEIIRWQTPLAHMRRTAIADSELGGK--TIRKGDKVVMWYYSG 343
Query: 403 HYDPEYYPDPEKFDPERFSPENIESRPHYTYLPFGDGPRNCIGKIL 448
+ D E PE+F +R P +L FG G C+G L
Sbjct: 344 NRDDEVIDRPEEFIIDRPRPRQ--------HLSFGFGIHRCVGNRL 381
>pdb|3VOO|A Chain A, Cytochrome P450sp Alpha (cyp152b1) Mutant A245e
Length = 407
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 19/86 (22%), Positives = 41/86 (47%), Gaps = 5/86 (5%)
Query: 354 YLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPEYYPDPE 413
Y + +E R YP P + + + ++ + G ++ + + ++D + DP+
Sbjct: 265 YAELFVQEVRRFYPFFPAVVARASQDFEWEG--MAFPEGRQVVLDLYGSNHDAATWADPQ 322
Query: 414 KFDPERFSPENIESRPHYTYLPFGDG 439
+F PERF + +S + ++P G G
Sbjct: 323 EFRPERFRAWDEDS---FNFIPQGGG 345
>pdb|3VNO|A Chain A, Cytochrome P450sp Alpha (cyp152b1) Mutant R241e
Length = 407
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 19/86 (22%), Positives = 41/86 (47%), Gaps = 5/86 (5%)
Query: 354 YLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPEYYPDPE 413
Y + +E R YP P + + + ++ + G ++ + + ++D + DP+
Sbjct: 265 YAELFVQEVRRFYPFFPAVVARASQDFEWEG--MAFPEGRQVVLDLYGSNHDAATWADPQ 322
Query: 414 KFDPERFSPENIESRPHYTYLPFGDG 439
+F PERF + +S + ++P G G
Sbjct: 323 EFRPERFRAWDEDS---FNFIPQGGG 345
>pdb|3VM4|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) In Complex With
(R)-Ibuprophen
Length = 407
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 19/86 (22%), Positives = 41/86 (47%), Gaps = 5/86 (5%)
Query: 354 YLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPEYYPDPE 413
Y + +E R YP P + + + ++ + G ++ + + ++D + DP+
Sbjct: 265 YAELFVQEVRRFYPFFPAVVARASQDFEWEG--MAFPEGRQVVLDLYGSNHDAATWADPQ 322
Query: 414 KFDPERFSPENIESRPHYTYLPFGDG 439
+F PERF + +S + ++P G G
Sbjct: 323 EFRPERFRAWDEDS---FNFIPQGGG 345
>pdb|3CXZ|A Chain A, Crystal Structure Of Cytochrome P450 Cyp121 R386l Mutant
From M. Tuberculosis
Length = 396
Score = 37.4 bits (85), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 34/162 (20%), Positives = 66/162 (40%), Gaps = 29/162 (17%)
Query: 288 EMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYE 347
++D++ FF G ++ S LT L L + P +++ L +
Sbjct: 217 HVSDELFATIGVTFFGAGVISTGSFLTTALISLIQRPQLRNLLHE--------------- 261
Query: 348 ICHKMSYLDKVTKEALRMYPSLPQ-LDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDP 406
K + +E LR+ S L R++ ++ D+ + G + + ++DP
Sbjct: 262 ---KPELIPAGVEELLRINLSFADGLPRLATADIQV--GDVLVRKGELVLVLLEGANFDP 316
Query: 407 EYYPDPEKFDPERFSPENIESRPHYTYLPFGDGPRNCIGKIL 448
E++P+P + +R +P ++L FG G C G L
Sbjct: 317 EHFPNPGSIELDRPNP--------TSHLAFGRGQHFCPGSAL 350
>pdb|4G1X|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Cyp121 In
Complex With 4-(1h-1,2,4-Triazol-1-Yl)quinolin-6-Amine
pdb|4G2G|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Cyp121 In
Complex With 4,4'-(1h-1,2,3-Triazole-1,5-Diyl)diphenol
Length = 395
Score = 37.4 bits (85), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 34/162 (20%), Positives = 66/162 (40%), Gaps = 29/162 (17%)
Query: 288 EMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYE 347
++D++ FF G ++ S LT L L + P +++ L +
Sbjct: 216 HVSDELFATIGVTFFGAGVISTGSFLTTALISLIQRPQLRNLLHE--------------- 260
Query: 348 ICHKMSYLDKVTKEALRMYPSLPQ-LDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDP 406
K + +E LR+ S L R++ ++ D+ + G + + ++DP
Sbjct: 261 ---KPELIPAGVEELLRINLSFADGLPRLATADIQV--GDVLVRKGELVLVLLEGANFDP 315
Query: 407 EYYPDPEKFDPERFSPENIESRPHYTYLPFGDGPRNCIGKIL 448
E++P+P + +R +P ++L FG G C G L
Sbjct: 316 EHFPNPGSIELDRPNP--------TSHLAFGRGQHFCPGSAL 349
>pdb|3ABA|A Chain A, Crystal Structure Of Cyp105p1 In Complex With Filipin I
Length = 403
Score = 37.4 bits (85), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 63/324 (19%), Positives = 128/324 (39%), Gaps = 71/324 (21%)
Query: 127 RNKLSPTFTSGKIKYMFPLIKKCSDQLITTIRKQIGESKQMSLEVKDYCARYTTDVIGTT 186
R L+ FT +++ + P I++ D+ + I E++ +++ A ++ +
Sbjct: 99 RKLLAKEFTVRRMQALRPNIQRIVDEHLDAI-----EARGGPVDLVKTFANAVPSMVISD 153
Query: 187 AFGIEINSLENPDSEFRQVSLLVMKPSVLQMLKAVLSELIPLIKYLNLKIFDPRISQFFS 246
FG+ + +EF+ ++ +M+ V Q A +E + R+
Sbjct: 154 LFGVPVER----RAEFQDIAEAMMR--VDQ--DAAATEAAGM-----------RLGGLLY 194
Query: 247 NLVKTNLSYREKNNIKRDDFLNIMMQLQIAQRGKTLSPDDVEMTDDVITAQSFVFFFGGY 306
LV+ E+ DD ++ ++ T PD V + D + + +
Sbjct: 195 QLVQ------ERRANPGDDLISALI--------TTEDPDGV-VDDMFLMNAAGTLLIAAH 239
Query: 307 ETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSYLDKVTKEALRMY 366
+T++ ++ L +PD + LR++ S + +E LR Y
Sbjct: 240 DTTACMIGLGTALLLDSPDQLALLRED------------------PSLVGNAVEELLR-Y 280
Query: 367 PSLPQL--DRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPEYYPDPEKFDPERFSPEN 424
++ Q +R++ + +L + G ++ A +DP + +PE+FD
Sbjct: 281 LTIGQFGGERVATRDVELGGVRIA--KGEQVVAHVLAADFDPAFVEEPERFD-------- 330
Query: 425 IESRPHYTYLPFGDGPRNCIGKIL 448
I RP +L FG G CIG+ L
Sbjct: 331 ITRRP-APHLAFGFGAHQCIGQQL 353
>pdb|1N40|A Chain A, Atomic Structure Of Cyp121, A Mycobacterial P450
pdb|1N4G|A Chain A, Structure Of Cyp121, A Mycobacterial P450, In Complex With
Iodopyrazole
pdb|2IJ5|A Chain A, Crystal Structure Of Cytochrome P450 Cyp121, P212121 Space
Group
pdb|2IJ5|B Chain B, Crystal Structure Of Cytochrome P450 Cyp121, P212121 Space
Group
pdb|2IJ5|C Chain C, Crystal Structure Of Cytochrome P450 Cyp121, P212121 Space
Group
pdb|2IJ5|D Chain D, Crystal Structure Of Cytochrome P450 Cyp121, P212121 Space
Group
pdb|2IJ5|E Chain E, Crystal Structure Of Cytochrome P450 Cyp121, P212121 Space
Group
pdb|2IJ5|F Chain F, Crystal Structure Of Cytochrome P450 Cyp121, P212121 Space
Group
pdb|2IJ7|A Chain A, Structure Of Mycobacterium Tuberculosis Cyp121 In Complex
With The Antifungal Drug Fluconazole
pdb|2IJ7|B Chain B, Structure Of Mycobacterium Tuberculosis Cyp121 In Complex
With The Antifungal Drug Fluconazole
pdb|2IJ7|C Chain C, Structure Of Mycobacterium Tuberculosis Cyp121 In Complex
With The Antifungal Drug Fluconazole
pdb|2IJ7|D Chain D, Structure Of Mycobacterium Tuberculosis Cyp121 In Complex
With The Antifungal Drug Fluconazole
pdb|2IJ7|E Chain E, Structure Of Mycobacterium Tuberculosis Cyp121 In Complex
With The Antifungal Drug Fluconazole
pdb|2IJ7|F Chain F, Structure Of Mycobacterium Tuberculosis Cyp121 In Complex
With The Antifungal Drug Fluconazole
pdb|3G5F|A Chain A, Crystallographic Analysis Of Cytochrome P450 Cyp121
pdb|3G5H|A Chain A, Crystallographic Analysis Of Cytochrome P450 Cyp121
pdb|4G44|A Chain A, Structure Of P450 Cyp121 In Complex With Lead Compound
Mb286, 3-((1h- 1,2,4-Triazol-1-Yl)methyl)aniline
pdb|4G45|A Chain A, Structure Of Cytochrome Cyp121 In Complex With
2-Methylquinolin-6- Amine
pdb|4G46|A Chain A, Structure Of Cytochrome P450 Cyp121 In Complex With
4-Oxo-4,5,6,7- Tetrahydrobenzofuran-3-Carboxylate
pdb|4G47|A Chain A, Structure Of Cytochrome P450 Cyp121 In Complex With
4-(1h-1,2,4- Triazol-1-Yl)phenol
pdb|4G48|A Chain A, Structure Of Cyp121 In Complex With
4-(4-Phenoxy-1h-Pyrazol-3-Yl) Benzene-1,3-Diol
Length = 396
Score = 37.4 bits (85), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 34/162 (20%), Positives = 66/162 (40%), Gaps = 29/162 (17%)
Query: 288 EMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYE 347
++D++ FF G ++ S LT L L + P +++ L +
Sbjct: 217 HVSDELFATIGVTFFGAGVISTGSFLTTALISLIQRPQLRNLLHE--------------- 261
Query: 348 ICHKMSYLDKVTKEALRMYPSLPQ-LDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDP 406
K + +E LR+ S L R++ ++ D+ + G + + ++DP
Sbjct: 262 ---KPELIPAGVEELLRINLSFADGLPRLATADIQV--GDVLVRKGELVLVLLEGANFDP 316
Query: 407 EYYPDPEKFDPERFSPENIESRPHYTYLPFGDGPRNCIGKIL 448
E++P+P + +R +P ++L FG G C G L
Sbjct: 317 EHFPNPGSIELDRPNP--------TSHLAFGRGQHFCPGSAL 350
>pdb|3AWQ|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) Mutant L78f
Length = 415
Score = 37.4 bits (85), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 19/86 (22%), Positives = 41/86 (47%), Gaps = 5/86 (5%)
Query: 354 YLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPEYYPDPE 413
Y + +E R YP P + + + ++ + G ++ + + ++D + DP+
Sbjct: 273 YAELFVQEVRRFYPFFPAVVARASQDFEWEG--MAFPEGRQVVLDLYGSNHDAATWADPQ 330
Query: 414 KFDPERFSPENIESRPHYTYLPFGDG 439
+F PERF + +S + ++P G G
Sbjct: 331 EFRPERFRAWDEDS---FNFIPQGGG 353
>pdb|3E5L|A Chain A, Crystal Structure Of Cyp105p1 H72a Mutant
Length = 403
Score = 37.4 bits (85), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 63/324 (19%), Positives = 128/324 (39%), Gaps = 71/324 (21%)
Query: 127 RNKLSPTFTSGKIKYMFPLIKKCSDQLITTIRKQIGESKQMSLEVKDYCARYTTDVIGTT 186
R L+ FT +++ + P I++ D+ + I E++ +++ A ++ +
Sbjct: 99 RKLLAKEFTVRRMQALRPNIQRIVDEHLDAI-----EARGGPVDLVKTFANAVPSMVISD 153
Query: 187 AFGIEINSLENPDSEFRQVSLLVMKPSVLQMLKAVLSELIPLIKYLNLKIFDPRISQFFS 246
FG+ + +EF+ ++ +M+ V Q A +E + R+
Sbjct: 154 LFGVPVER----RAEFQDIAEAMMR--VDQ--DAAATEAAGM-----------RLGGLLY 194
Query: 247 NLVKTNLSYREKNNIKRDDFLNIMMQLQIAQRGKTLSPDDVEMTDDVITAQSFVFFFGGY 306
LV+ E+ DD ++ ++ T PD V + D + + +
Sbjct: 195 QLVQ------ERRANPGDDLISALI--------TTEDPDGV-VDDMFLMNAAGTLLIAAH 239
Query: 307 ETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSYLDKVTKEALRMY 366
+T++ ++ L +PD + LR++ S + +E LR Y
Sbjct: 240 DTTACMIGLGTALLLDSPDQLALLRED------------------PSLVGNAVEELLR-Y 280
Query: 367 PSLPQL--DRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPEYYPDPEKFDPERFSPEN 424
++ Q +R++ + +L + G ++ A +DP + +PE+FD
Sbjct: 281 LTIGQFGGERVATRDVELGGVRIA--KGEQVVAHVLAADFDPAFVEEPERFD-------- 330
Query: 425 IESRPHYTYLPFGDGPRNCIGKIL 448
I RP +L FG G CIG+ L
Sbjct: 331 ITRRP-APHLAFGFGAHQCIGQQL 353
>pdb|3AWM|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) Wild-Type With Palmitic
Acid
Length = 415
Score = 37.4 bits (85), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 19/86 (22%), Positives = 41/86 (47%), Gaps = 5/86 (5%)
Query: 354 YLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPEYYPDPE 413
Y + +E R YP P + + + ++ + G ++ + + ++D + DP+
Sbjct: 273 YAELFVQEVRRFYPFFPAVVARASQDFEWEG--MAFPEGRQVVLDLYGSNHDAATWADPQ 330
Query: 414 KFDPERFSPENIESRPHYTYLPFGDG 439
+F PERF + +S + ++P G G
Sbjct: 331 EFRPERFRAWDEDS---FNFIPQGGG 353
>pdb|3E5J|A Chain A, Crystal Structure Of Cyp105p1 Wild-type Ligand-free Form
pdb|3E5K|A Chain A, Crystal Structure Of Cyp105p1 Wild-Type 4-Phenylimidazole
Complex
Length = 403
Score = 37.4 bits (85), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 63/324 (19%), Positives = 128/324 (39%), Gaps = 71/324 (21%)
Query: 127 RNKLSPTFTSGKIKYMFPLIKKCSDQLITTIRKQIGESKQMSLEVKDYCARYTTDVIGTT 186
R L+ FT +++ + P I++ D+ + I E++ +++ A ++ +
Sbjct: 99 RKLLAKEFTVRRMQALRPNIQRIVDEHLDAI-----EARGGPVDLVKTFANAVPSMVISD 153
Query: 187 AFGIEINSLENPDSEFRQVSLLVMKPSVLQMLKAVLSELIPLIKYLNLKIFDPRISQFFS 246
FG+ + +EF+ ++ +M+ V Q A +E + R+
Sbjct: 154 LFGVPVER----RAEFQDIAEAMMR--VDQ--DAAATEAAGM-----------RLGGLLY 194
Query: 247 NLVKTNLSYREKNNIKRDDFLNIMMQLQIAQRGKTLSPDDVEMTDDVITAQSFVFFFGGY 306
LV+ E+ DD ++ ++ T PD V + D + + +
Sbjct: 195 QLVQ------ERRANPGDDLISALI--------TTEDPDGV-VDDMFLMNAAGTLLIAAH 239
Query: 307 ETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSYLDKVTKEALRMY 366
+T++ ++ L +PD + LR++ S + +E LR Y
Sbjct: 240 DTTACMIGLGTALLLDSPDQLALLRED------------------PSLVGNAVEELLR-Y 280
Query: 367 PSLPQL--DRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPEYYPDPEKFDPERFSPEN 424
++ Q +R++ + +L + G ++ A +DP + +PE+FD
Sbjct: 281 LTIGQFGGERVATRDVELGGVRIA--KGEQVVAHVLAADFDPAFVEEPERFD-------- 330
Query: 425 IESRPHYTYLPFGDGPRNCIGKIL 448
I RP +L FG G CIG+ L
Sbjct: 331 ITRRP-APHLAFGFGAHQCIGQQL 353
>pdb|3CY0|A Chain A, Crystal Structure Of Cytochrome P450 Cyp121 S237a Mutant
From Mycobacterium Tuberculosis
Length = 396
Score = 37.0 bits (84), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 34/162 (20%), Positives = 65/162 (40%), Gaps = 29/162 (17%)
Query: 288 EMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYE 347
++D++ FF G + S LT L L + P +++ L +
Sbjct: 217 HVSDELFATIGVTFFGAGVIATGSFLTTALISLIQRPQLRNLLHE--------------- 261
Query: 348 ICHKMSYLDKVTKEALRMYPSLPQ-LDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDP 406
K + +E LR+ S L R++ ++ D+ + G + + ++DP
Sbjct: 262 ---KPELIPAGVEELLRINLSFADGLPRLATADIQV--GDVLVRKGELVLVLLEGANFDP 316
Query: 407 EYYPDPEKFDPERFSPENIESRPHYTYLPFGDGPRNCIGKIL 448
E++P+P + +R +P ++L FG G C G L
Sbjct: 317 EHFPNPGSIELDRPNP--------TSHLAFGRGQHFCPGSAL 350
>pdb|1IZO|A Chain A, Cytochrome P450 Bs Beta Complexed With Fatty Acid
pdb|1IZO|B Chain B, Cytochrome P450 Bs Beta Complexed With Fatty Acid
pdb|1IZO|C Chain C, Cytochrome P450 Bs Beta Complexed With Fatty Acid
pdb|2ZQX|A Chain A, Cytochrome P450bsbeta Cocrystallized With Heptanoic Acid
pdb|2ZQX|B Chain B, Cytochrome P450bsbeta Cocrystallized With Heptanoic Acid
pdb|2ZQX|C Chain C, Cytochrome P450bsbeta Cocrystallized With Heptanoic Acid
pdb|2ZQJ|A Chain A, Substrate-Free Form Of Cytochrome P450bsbeta
pdb|2ZQJ|B Chain B, Substrate-Free Form Of Cytochrome P450bsbeta
pdb|2ZQJ|C Chain C, Substrate-Free Form Of Cytochrome P450bsbeta
Length = 417
Score = 37.0 bits (84), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 39/83 (46%), Gaps = 9/83 (10%)
Query: 359 TKEALRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPEYYPDPEKFDPE 418
+E R YP P L + K + N + GT + + + ++DP + P++F PE
Sbjct: 280 VQEVRRYYPFGPFLGALVKKDFVWNNCEFK--KGTSVLLDLYGTNHDPRLWDHPDEFRPE 337
Query: 419 RFS--PENIESRPHYTYLPFGDG 439
RF+ EN+ + +P G G
Sbjct: 338 RFAEREENL-----FDMIPQGGG 355
>pdb|2ZUJ|A Chain A, Crystal Structure Of Camphor-Soaked Ferric Cytochrome
P450cam Mutant(D297l)
Length = 415
Score = 36.6 bits (83), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 52/241 (21%), Positives = 94/241 (39%), Gaps = 46/241 (19%)
Query: 214 VLQMLKAVLSELIPLIKYLNLKIFDPRISQFFSNLVKTNLSY-----REKNNIKRDDFLN 268
+ +L + E IP +KYL ++ P S F+ + Y ++ D ++
Sbjct: 163 IFMLLAGLPEEDIPHLKYLTDQMTRPDGSMTFAEAKEALYDYLIPIIEQRRQKPGTDAIS 222
Query: 269 IMMQLQIAQRGKTLSPDDVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQS 328
I+ Q+ R +T D + GG +T + L+F + LA++P+
Sbjct: 223 IVANGQVNGR---------PITSDEAKRMCGLLLVGGLDTVVNFLSFSMEFLAKSPE--- 270
Query: 329 KLRQEIMATKKKEGELTYEICHKMSYLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLT 388
RQE++ ++ + +E LR + SL L RI Y+ +
Sbjct: 271 -HRQELIERPER--------------IPAACEELLRRF-SLVALGRILTSDYEF--HGVQ 312
Query: 389 LDVGTKISIPTFAIHYDPEYYPDPEKFDPERFSPENIE-SRPHYTYLPFGDGPRNCIGKI 447
L G +I +P D + E P +++ SR ++ FG G C+G+
Sbjct: 313 LKKGDQILLPQMLSGLD----------ERENACPMHVDFSRQKVSHTTFGHGSHLCLGQH 362
Query: 448 L 448
L
Sbjct: 363 L 363
>pdb|3CY1|A Chain A, Crystal Structure Of The Cytochrome P450 Cyp121 S279a
Mutant From M. Tuberculosis
Length = 396
Score = 36.2 bits (82), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 33/162 (20%), Positives = 66/162 (40%), Gaps = 29/162 (17%)
Query: 288 EMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYE 347
++D++ FF G ++ S LT L L + P +++ L +
Sbjct: 217 HVSDELFATIGVTFFGAGVISTGSFLTTALISLIQRPQLRNLLHE--------------- 261
Query: 348 ICHKMSYLDKVTKEALRMYPSLPQ-LDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDP 406
K + +E LR+ + L R++ ++ D+ + G + + ++DP
Sbjct: 262 ---KPELIPAGVEELLRINLAFADGLPRLATADIQV--GDVLVRKGELVLVLLEGANFDP 316
Query: 407 EYYPDPEKFDPERFSPENIESRPHYTYLPFGDGPRNCIGKIL 448
E++P+P + +R +P ++L FG G C G L
Sbjct: 317 EHFPNPGSIELDRPNP--------TSHLAFGRGQHFCPGSAL 350
>pdb|3AWP|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) Mutant F288g
Length = 415
Score = 36.2 bits (82), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 19/86 (22%), Positives = 41/86 (47%), Gaps = 5/86 (5%)
Query: 354 YLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPEYYPDPE 413
Y + +E R YP P + + + ++ + G ++ + + ++D + DP+
Sbjct: 273 YAELFVQEVRRFYPFGPAVVARASQDFEWEG--MAFPEGRQVVLDLYGSNHDAATWADPQ 330
Query: 414 KFDPERFSPENIESRPHYTYLPFGDG 439
+F PERF + +S + ++P G G
Sbjct: 331 EFRPERFRAWDEDS---FNFIPQGGG 353
>pdb|3DAM|A Chain A, Crystal Structure Of Allene Oxide Synthase
pdb|3DAN|A Chain A, Crystal Structure Of Allene Oxide Synthase
pdb|3DBM|A Chain A, Crystal Structure Of Allene Oxide Synthase
Length = 473
Score = 35.8 bits (81), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 60/136 (44%), Gaps = 18/136 (13%)
Query: 325 DIQSKLRQEIMATKKK--EGELTYEICHKMSYLDKVTKEALRMYPSLPQLDRISVKKYKL 382
++ ++L +EI K +G +T E +M V E+LR+ P +P + + +
Sbjct: 298 NLHTQLAEEIRGAIKSYGDGNVTLEAIEQMPLTKSVVYESLRIEPPVPPQYGKAKSNFTI 357
Query: 383 PNTDLTLDVGTK---ISIPTFAIHYDPEYYPDPEKFDPERFSPENIESRPHYTYLPFGDG 439
+ D T +V FA DP+ + PE++ P+RF + E+ Y + + +G
Sbjct: 358 ESHDATFEVKKGEMLFGYQPFATK-DPKVFDRPEEYVPDRFVGDG-EALLKYVW--WSNG 413
Query: 440 P---------RNCIGK 446
P + C GK
Sbjct: 414 PETESPTVENKQCAGK 429
>pdb|3CXX|A Chain A, Crystal Structure Of Cytochrome P450 Cyp121 F338h From M.
Tuberculosis
Length = 396
Score = 34.7 bits (78), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 33/162 (20%), Positives = 65/162 (40%), Gaps = 29/162 (17%)
Query: 288 EMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYE 347
++D++ FF G ++ S LT L L + P +++ L +
Sbjct: 217 HVSDELFATIGVTFFGAGVISTGSFLTTALISLIQRPQLRNLLHE--------------- 261
Query: 348 ICHKMSYLDKVTKEALRMYPSLPQ-LDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDP 406
K + +E LR+ S L R++ ++ D+ + G + + ++DP
Sbjct: 262 ---KPELIPAGVEELLRINLSFADGLPRLATADIQV--GDVLVRKGELVLVLLEGANFDP 316
Query: 407 EYYPDPEKFDPERFSPENIESRPHYTYLPFGDGPRNCIGKIL 448
E++P+P + +R +P ++L G G C G L
Sbjct: 317 EHFPNPGSIELDRPNP--------TSHLAHGRGQHFCPGSAL 350
>pdb|2ZUH|A Chain A, Crystal Structure Of Camphor-Soaked Ferric Cytochrome
P450cam Mutant (D297a)
Length = 415
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 51/241 (21%), Positives = 93/241 (38%), Gaps = 46/241 (19%)
Query: 214 VLQMLKAVLSELIPLIKYLNLKIFDPRISQFFSNLVKTNLSY-----REKNNIKRDDFLN 268
+ +L + E IP +KYL ++ P S F+ + Y ++ D ++
Sbjct: 163 IFMLLAGLPEEDIPHLKYLTDQMTRPDGSMTFAEAKEALYDYLIPIIEQRRQKPGTDAIS 222
Query: 269 IMMQLQIAQRGKTLSPDDVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQS 328
I+ Q+ R +T D + GG +T + L+F + LA++P+
Sbjct: 223 IVANGQVNGR---------PITSDEAKRMCGLLLVGGLDTVVNFLSFSMEFLAKSPE--- 270
Query: 329 KLRQEIMATKKKEGELTYEICHKMSYLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLT 388
RQE++ ++ + +E LR + SL RI Y+ +
Sbjct: 271 -HRQELIERPER--------------IPAACEELLRRF-SLVAAGRILTSDYEF--HGVQ 312
Query: 389 LDVGTKISIPTFAIHYDPEYYPDPEKFDPERFSPENIE-SRPHYTYLPFGDGPRNCIGKI 447
L G +I +P D + E P +++ SR ++ FG G C+G+
Sbjct: 313 LKKGDQILLPQMLSGLD----------ERENACPMHVDFSRQKVSHTTFGHGSHLCLGQH 362
Query: 448 L 448
L
Sbjct: 363 L 363
>pdb|2GQX|A Chain A, Crystal Structure Of Cytochrome P450cam Mutant
(F87wY96FL244AV247LC334A) WITH PENTACHLOROBENZENE
pdb|2GQX|B Chain B, Crystal Structure Of Cytochrome P450cam Mutant
(F87wY96FL244AV247LC334A) WITH PENTACHLOROBENZENE
pdb|2GR6|A Chain A, Crystal Structure Of Cytochrome P450cam Mutant
(F87wY96FL244AV247LC334A)
pdb|2GR6|B Chain B, Crystal Structure Of Cytochrome P450cam Mutant
(F87wY96FL244AV247LC334A)
Length = 405
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 51/241 (21%), Positives = 93/241 (38%), Gaps = 46/241 (19%)
Query: 214 VLQMLKAVLSELIPLIKYLNLKIFDPRISQFFSNLVKTNLSY-----REKNNIKRDDFLN 268
+ +L + E IP +KYL ++ P S F+ + Y ++ D ++
Sbjct: 153 IFMLLAGLPEEDIPHLKYLTDQMTRPDGSMTFAEAKEALYDYLIPIIEQRRQKPGTDAIS 212
Query: 269 IMMQLQIAQRGKTLSPDDVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQS 328
I+ Q+ R +T D GG +T + L+F + LA++P+
Sbjct: 213 IVANGQVNGR---------PITSDEAKRMCGALLLGGLDTVVNFLSFSMEFLAKSPE--- 260
Query: 329 KLRQEIMATKKKEGELTYEICHKMSYLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLT 388
RQE++ ++ + +E LR + SL RI Y+ +
Sbjct: 261 -HRQELIERPER--------------IPAACEELLRRF-SLVADGRILTSDYEF--HGVQ 302
Query: 389 LDVGTKISIPTFAIHYDPEYYPDPEKFDPERFSPENIE-SRPHYTYLPFGDGPRNCIGKI 447
L G +I +P D + E +P +++ SR ++ FG G C+G+
Sbjct: 303 LKKGDQILLPQMLSGLD----------ERENAAPMHVDFSRQKVSHTTFGHGSHLCLGQH 352
Query: 448 L 448
L
Sbjct: 353 L 353
>pdb|2YOO|A Chain A, Cholest-4-en-3-one Bound Structure Of Cyp142 From
Mycobacterium Smegmatis
pdb|2YOO|B Chain B, Cholest-4-en-3-one Bound Structure Of Cyp142 From
Mycobacterium Smegmatis
pdb|2YOO|C Chain C, Cholest-4-en-3-one Bound Structure Of Cyp142 From
Mycobacterium Smegmatis
pdb|2YOO|D Chain D, Cholest-4-en-3-one Bound Structure Of Cyp142 From
Mycobacterium Smegmatis
pdb|3ZBY|A Chain A, Ligand-free Structure Of Cyp142 From Mycobacterium
Smegmatis
pdb|3ZBY|B Chain B, Ligand-free Structure Of Cyp142 From Mycobacterium
Smegmatis
pdb|3ZBY|C Chain C, Ligand-free Structure Of Cyp142 From Mycobacterium
Smegmatis
pdb|3ZBY|D Chain D, Ligand-free Structure Of Cyp142 From Mycobacterium
Smegmatis
pdb|3ZBY|E Chain E, Ligand-free Structure Of Cyp142 From Mycobacterium
Smegmatis
pdb|3ZBY|F Chain F, Ligand-free Structure Of Cyp142 From Mycobacterium
Smegmatis
Length = 407
Score = 34.3 bits (77), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 35/160 (21%), Positives = 61/160 (38%), Gaps = 29/160 (18%)
Query: 289 MTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEI 348
M+DD I ++ + GG ET+ L+ +L R+ D L ++
Sbjct: 218 MSDDEIVFETLLILIGGDETTRHTLSGGTEQLLRHRDQWDALVADV-------------- 263
Query: 349 CHKMSYLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPEY 408
L +E LR + + R T+L G KI + + ++D
Sbjct: 264 ----DLLPGAIEEMLRWTSPVKNMCRTLTADTVFHGTELR--AGEKIMLMFESANFDESV 317
Query: 409 YPDPEKFDPERFSPENIESRPHYTYLPFGDGPRNCIGKIL 448
+ DP+ F I+ P+ +++ FG G C+G L
Sbjct: 318 FGDPDNF--------RIDRNPN-SHVAFGFGTHFCLGNQL 348
>pdb|2RCM|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a) At 1.73 A Resolution
pdb|2RCM|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a) At 1.73 A Resolution
pdb|3DSJ|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 13(S)-Hod At 1.60 A
Resolution
pdb|3DSJ|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 13(S)-Hod At 1.60 A
Resolution
pdb|3DSK|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 12r,13s-Vernolic Acid At
1.55 A Resolution
pdb|3DSK|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 12r,13s-Vernolic Acid At
1.55 A Resolution
Length = 495
Score = 34.3 bits (77), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 49/138 (35%), Gaps = 24/138 (17%)
Query: 326 IQSKLRQEIMAT-KKKEGELTYEICHKMSYLDKVTKEALRMYPSLPQLDRISVKKYKLPN 384
+ ++L +EI + K GELT KM V E LR P + +Y
Sbjct: 317 VHNRLAEEIRSVIKSNGGELTMGAIEKMELTKSVVYECLRFEPPV-------TAQYGRAK 369
Query: 385 TDLTL---DVGTKISIPTFAIHYDPEYYPDPEKFD------PERFSPENIESRPHYTYLP 435
DL + D K+ Y P DP+ FD PERF E E +
Sbjct: 370 KDLVIESHDAAFKVKAGEMLYGYQPLATRDPKIFDRADEFVPERFVGEEGEKLLRHVLWS 429
Query: 436 FGD-------GPRNCIGK 446
G G + C GK
Sbjct: 430 NGPETETPTVGNKQCAGK 447
>pdb|2RCH|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hod At 1.85 A Resolution
pdb|2RCH|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hod At 1.85 A Resolution
pdb|2RCL|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 12r,13s-Vernolic Acid At 2.4 A Resolution
pdb|2RCL|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 12r,13s-Vernolic Acid At 2.4 A Resolution
pdb|3CLI|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) At 1.80 A
Resolution
pdb|3CLI|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) At 1.80 A
Resolution
pdb|3DSI|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hot At 1.60 A Resolution
pdb|3DSI|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hot At 1.60 A Resolution
Length = 495
Score = 34.3 bits (77), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 49/138 (35%), Gaps = 24/138 (17%)
Query: 326 IQSKLRQEIMAT-KKKEGELTYEICHKMSYLDKVTKEALRMYPSLPQLDRISVKKYKLPN 384
+ ++L +EI + K GELT KM V E LR P + +Y
Sbjct: 317 VHNRLAEEIRSVIKSNGGELTMGAIEKMELTKSVVYECLRFEPPV-------TAQYGRAK 369
Query: 385 TDLTL---DVGTKISIPTFAIHYDPEYYPDPEKFD------PERFSPENIESRPHYTYLP 435
DL + D K+ Y P DP+ FD PERF E E +
Sbjct: 370 KDLVIESHDAAFKVKAGEMLYGYQPLATRDPKIFDRADEFVPERFVGEEGEKLLRHVLWS 429
Query: 436 FGD-------GPRNCIGK 446
G G + C GK
Sbjct: 430 NGPETETPTVGNKQCAGK 447
>pdb|2A1M|A Chain A, Crystal Structure Of Ferrous Dioxygen Complex Of Wild-Type
Cytochrome P450cam
pdb|2A1M|B Chain B, Crystal Structure Of Ferrous Dioxygen Complex Of Wild-Type
Cytochrome P450cam
Length = 415
Score = 34.3 bits (77), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 51/241 (21%), Positives = 94/241 (39%), Gaps = 46/241 (19%)
Query: 214 VLQMLKAVLSELIPLIKYLNLKIFDPRISQFFSNLVKTNLSY-----REKNNIKRDDFLN 268
+ +L + E IP +KYL ++ P S F+ + Y ++ D ++
Sbjct: 163 IFMLLAGLPEEDIPHLKYLTDQMTRPDGSMTFAEAKEALYDYLIPIIEQRRQKPGTDAIS 222
Query: 269 IMMQLQIAQRGKTLSPDDVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQS 328
I+ Q+ R +T D + GG +T + L+F + LA++P+
Sbjct: 223 IVANGQVNGR---------PITSDEAKRMCGLLLVGGLDTVVNFLSFSMEFLAKSPE--- 270
Query: 329 KLRQEIMATKKKEGELTYEICHKMSYLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLT 388
RQE++ ++ + +E LR + SL RI Y+ +
Sbjct: 271 -HRQELIERPER--------------IPAACEELLRRF-SLVADGRILTSDYEF--HGVQ 312
Query: 389 LDVGTKISIPTFAIHYDPEYYPDPEKFDPERFSPENIE-SRPHYTYLPFGDGPRNCIGKI 447
L G +I +P D + E +P +++ SR ++ FG G C+G+
Sbjct: 313 LKKGDQILLPQMLSGLD----------ERENAAPMHVDFSRQKVSHTTFGHGSHLCLGQH 362
Query: 448 L 448
L
Sbjct: 363 L 363
>pdb|1QMQ|A Chain A, Optical Detection Of Cytochrome P450 By Sensitizer-Linked
Substrates
pdb|1GJM|A Chain A, Covalent Attachment Of An Electroactive Sulphydryl Reagent
In The Active Site Of Cytochrome P450cam
pdb|1K2O|A Chain A, Cytochrome P450cam With Bound
Bis(2,2'-Bipyridine)-(5-Methyl-2-2'-
Bipyridine)-C2-Adamantane Ruthenium (Ii)
pdb|1K2O|B Chain B, Cytochrome P450cam With Bound
Bis(2,2'-Bipyridine)-(5-Methyl-2-2'-
Bipyridine)-C2-Adamantane Ruthenium (Ii)
pdb|1T87|A Chain A, Crystal Structure Of The Ferrous Co-Bound Cytochrome
P450cam (C334a)
pdb|1T87|B Chain B, Crystal Structure Of The Ferrous Co-Bound Cytochrome
P450cam (C334a)
pdb|1T88|A Chain A, Crystal Structure Of The Ferrous Cytochrome P450cam
(C334a)
pdb|1T88|B Chain B, Crystal Structure Of The Ferrous Cytochrome P450cam
(C334a)
pdb|3L61|A Chain A, Crystal Structure Of Substrate-Free P450cam At 200 Mm [k+]
pdb|3L62|A Chain A, Crystal Structure Of Substrate-Free P450cam At Low [k+]
pdb|3L63|A Chain A, Crystal Structure Of Camphor-Bound P450cam At Low [k+]
pdb|3OIA|A Chain A, Crystal Structure Of Cytochrome P450cam Crystallized In
The Presence Of A Tethered Substrate Analog
Adac1-C8gluetg-Bio
pdb|3OL5|A Chain A, Crystal Structure Of Cytochrome P450cam Crystallized With
A Tethered Substrate Analog 3oh-Adac1-C8-Dans
pdb|3P6M|A Chain A, Crystal Structure Of Cytochrome P450cam Crystallized In
The Presence Of A Tethered Substrate Analog
Adac1-C8-Dans
pdb|3P6N|A Chain A, Crystal Structure Of Cytochrome P450cam Crystallized In
The Presence Of A Tethered Substrate Analog
Adac1-C8-Dans
pdb|3P6O|A Chain A, Crystal Structure Of Cytochrome P450cam Crystallized In
The Presence Of A Tethered Substrate Analog
Adac1-Etg-Dans
pdb|3P6P|A Chain A, Crystal Structure Of Cytochrome P450cam Crystallized In
The Presence Of A Tethered Substrate Analog Adac1-C6-Bio
pdb|3P6Q|A Chain A, Crystal Structure Of Cytochrome P450cam Crystallized In
The Presence Of A Tethered Substrate Analog
Adac2-Etg-Boc
pdb|3P6R|A Chain A, Crystal Structure Of Cytochrome P450cam Crystallized In
The Presence Of A Tethered Substrate Analog
3oh-Adac1-Etg-Boc
pdb|3P6S|A Chain A, Crystal Structure Of Cytochrome P450cam Crystallized In
The Presence Of A Tethered Substrate Analog
Adac2-C8-Dans
pdb|3P6T|A Chain A, Crystal Structure Of Cytochrome P450cam Crystallized In
The Presence Of A Tethered Substrate Analog
Adac2-C8-Dans
pdb|3P6U|A Chain A, Crystal Structure Of Cytochrome P450cam Crystallized In
The Presence Of A Tethered Substrate Analog
Adac3-C6-Dans
pdb|3P6V|A Chain A, Crystal Structure Of Cytochrome P450cam Crystallized In
The Presence Of A Tethered Substrate Analog
3et-Adac1-Etg-Boc
pdb|3P6W|A Chain A, Crystal Structure Of Cytochrome P450cam Crystallized In
The Presence Of A Tethered Substrate Analog
Adac3-Etg-Boc
pdb|3P6X|A Chain A, Crystal Structure Of Cytochrome P450cam Crystallized In
The Presence Of A Tethered Substrate Analog
Adac3-C8-Dans
pdb|4G3R|A Chain A, Crystal Structure Of Nitrosyl Cytochrome P450cam
pdb|4G3R|B Chain B, Crystal Structure Of Nitrosyl Cytochrome P450cam
Length = 414
Score = 34.3 bits (77), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 51/241 (21%), Positives = 94/241 (39%), Gaps = 46/241 (19%)
Query: 214 VLQMLKAVLSELIPLIKYLNLKIFDPRISQFFSNLVKTNLSY-----REKNNIKRDDFLN 268
+ +L + E IP +KYL ++ P S F+ + Y ++ D ++
Sbjct: 162 IFMLLAGLPEEDIPHLKYLTDQMTRPDGSMTFAEAKEALYDYLIPIIEQRRQKPGTDAIS 221
Query: 269 IMMQLQIAQRGKTLSPDDVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQS 328
I+ Q+ R +T D + GG +T + L+F + LA++P+
Sbjct: 222 IVANGQVNGR---------PITSDEAKRMCGLLLVGGLDTVVNFLSFSMEFLAKSPE--- 269
Query: 329 KLRQEIMATKKKEGELTYEICHKMSYLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLT 388
RQE++ ++ + +E LR + SL RI Y+ +
Sbjct: 270 -HRQELIERPER--------------IPAACEELLRRF-SLVADGRILTSDYEF--HGVQ 311
Query: 389 LDVGTKISIPTFAIHYDPEYYPDPEKFDPERFSPENIE-SRPHYTYLPFGDGPRNCIGKI 447
L G +I +P D + E +P +++ SR ++ FG G C+G+
Sbjct: 312 LKKGDQILLPQMLSGLD----------ERENAAPMHVDFSRQKVSHTTFGHGSHLCLGQH 361
Query: 448 L 448
L
Sbjct: 362 L 362
>pdb|2H7R|A Chain A, L244a Mutant Of Cytochrome P450cam Complexed With
Imidazole
pdb|2H7S|A Chain A, L244a Mutant Of Cytochrome P450cam
pdb|2H7S|C Chain C, L244a Mutant Of Cytochrome P450cam
Length = 414
Score = 33.9 bits (76), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 51/241 (21%), Positives = 93/241 (38%), Gaps = 46/241 (19%)
Query: 214 VLQMLKAVLSELIPLIKYLNLKIFDPRISQFFSNLVKTNLSY-----REKNNIKRDDFLN 268
+ +L + E IP +KYL ++ P S F+ + Y ++ D ++
Sbjct: 162 IFMLLAGLPEEDIPHLKYLTDQMTRPDGSMTFAEAKEALYDYLIPIIEQRRQKPGTDAIS 221
Query: 269 IMMQLQIAQRGKTLSPDDVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQS 328
I+ Q+ R +T D GG +T + L+F + LA++P+
Sbjct: 222 IVANGQVNGR---------PITSDEAKRMCGALLVGGLDTVVNFLSFSMEFLAKSPE--- 269
Query: 329 KLRQEIMATKKKEGELTYEICHKMSYLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLT 388
RQE++ ++ + +E LR + SL RI Y+ +
Sbjct: 270 -HRQELIERPER--------------IPAACEELLRRF-SLVADGRILTSDYEF--HGVQ 311
Query: 389 LDVGTKISIPTFAIHYDPEYYPDPEKFDPERFSPENIE-SRPHYTYLPFGDGPRNCIGKI 447
L G +I +P D + E +P +++ SR ++ FG G C+G+
Sbjct: 312 LKKGDQILLPQMLSGLD----------ERENAAPMHVDFSRQKVSHTTFGHGSHLCLGQH 361
Query: 448 L 448
L
Sbjct: 362 L 362
>pdb|3NV5|A Chain A, Crystal Structure Of Cytochrome P450 Cyp101d2
pdb|3NV6|A Chain A, Crystal Structure Of Camphor-Bound Cyp101d2
Length = 452
Score = 33.9 bits (76), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 60/140 (42%), Gaps = 32/140 (22%)
Query: 307 ETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSYLDKVTKEALRMY 366
+T + L+F + LAR+P++ ++LR + + L + +E R +
Sbjct: 293 DTVVNFLSFFMIHLARHPELVAELRSDPLK------------------LMRGAEEMFRRF 334
Query: 367 PSLPQLDRISV-KKYKLPNTDLTLDVGTKISIPTFAIHYDPEYYPDPEKFDPERFSPENI 425
P + + ++ ++YK + L G I +PT D P+P K D FS +I
Sbjct: 335 PVVSEARMVAKDQEYK----GVFLKRGDMILLPTALHGLDDAANPEPWKLD---FSRRSI 387
Query: 426 ESRPHYTYLPFGDGPRNCIG 445
H T FG GP C G
Sbjct: 388 S---HST---FGGGPHRCAG 401
>pdb|4DXY|A Chain A, Crystal Structures Of Cyp101d2 Y96a Mutant
Length = 417
Score = 33.9 bits (76), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 60/140 (42%), Gaps = 32/140 (22%)
Query: 307 ETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSYLDKVTKEALRMY 366
+T + L+F + LAR+P++ ++LR + + L + +E R +
Sbjct: 258 DTVVNFLSFFMIHLARHPELVAELRSDPLK------------------LMRGAEEMFRRF 299
Query: 367 PSLPQLDRISV-KKYKLPNTDLTLDVGTKISIPTFAIHYDPEYYPDPEKFDPERFSPENI 425
P + + ++ ++YK + L G I +PT D P+P K D FS +I
Sbjct: 300 PVVSEARMVAKDQEYK----GVFLKRGDMILLPTALHGLDDAANPEPWKLD---FSRRSI 352
Query: 426 ESRPHYTYLPFGDGPRNCIG 445
H T FG GP C G
Sbjct: 353 S---HST---FGGGPHRCAG 366
>pdb|2ZUI|A Chain A, Crystal Structure Of Camphor-Soaked Ferric Cytochrome
P450cam Mutant (D297n)
Length = 415
Score = 33.9 bits (76), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 51/241 (21%), Positives = 93/241 (38%), Gaps = 46/241 (19%)
Query: 214 VLQMLKAVLSELIPLIKYLNLKIFDPRISQFFSNLVKTNLSY-----REKNNIKRDDFLN 268
+ +L + E IP +KYL ++ P S F+ + Y ++ D ++
Sbjct: 163 IFMLLAGLPEEDIPHLKYLTDQMTRPDGSMTFAEAKEALYDYLIPIIEQRRQKPGTDAIS 222
Query: 269 IMMQLQIAQRGKTLSPDDVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQS 328
I+ Q+ R +T D + GG +T + L+F + LA++P+
Sbjct: 223 IVANGQVNGR---------PITSDEAKRMCGLLLVGGLDTVVNFLSFSMEFLAKSPE--- 270
Query: 329 KLRQEIMATKKKEGELTYEICHKMSYLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLT 388
RQE++ ++ + +E LR + SL RI Y+ +
Sbjct: 271 -HRQELIERPER--------------IPAACEELLRRF-SLVANGRILTSDYEF--HGVQ 312
Query: 389 LDVGTKISIPTFAIHYDPEYYPDPEKFDPERFSPENIE-SRPHYTYLPFGDGPRNCIGKI 447
L G +I +P D + E P +++ SR ++ FG G C+G+
Sbjct: 313 LKKGDQILLPQMLSGLD----------ERENACPMHVDFSRQKVSHTTFGHGSHLCLGQH 362
Query: 448 L 448
L
Sbjct: 363 L 363
>pdb|1C8J|A Chain A, Crystal Structure Of Cytochrome P450cam Mutant (F87wY96F)
pdb|1C8J|B Chain B, Crystal Structure Of Cytochrome P450cam Mutant (F87wY96F)
Length = 414
Score = 33.5 bits (75), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 51/241 (21%), Positives = 93/241 (38%), Gaps = 46/241 (19%)
Query: 214 VLQMLKAVLSELIPLIKYLNLKIFDPRISQFFSNLVKTNLSY-----REKNNIKRDDFLN 268
+ +L + E IP +KYL ++ P S F+ + Y ++ D ++
Sbjct: 162 IFMLLAGLPEEDIPHLKYLTDQMTRPDGSMTFAEAKEALYDYLIPIIEQRRQKPGTDAIS 221
Query: 269 IMMQLQIAQRGKTLSPDDVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQS 328
I+ Q+ R +T D + GG +T + L+F + LA++P+
Sbjct: 222 IVANGQVNGR---------PITSDEAKRMCGLLLVGGLDTVVNFLSFSMEFLAKSPE--- 269
Query: 329 KLRQEIMATKKKEGELTYEICHKMSYLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLT 388
RQE++ ++ + +E LR + SL RI Y+ +
Sbjct: 270 -HRQELIERPER--------------IPAACEELLRRF-SLVADGRILTSDYEF--HGVQ 311
Query: 389 LDVGTKISIPTFAIHYDPEYYPDPEKFDPERFSPENIE-SRPHYTYLPFGDGPRNCIGKI 447
L G +I +P D + E P +++ SR ++ FG G C+G+
Sbjct: 312 LKKGDQILLPQMLSGLD----------ERENACPMHVDFSRQKVSHTTFGHGSHLCLGQH 361
Query: 448 L 448
L
Sbjct: 362 L 362
>pdb|2A1N|A Chain A, Crystal Structure Of Ferrous Dioxygen Complex Of D251n
Cytochrome P450cam
pdb|2A1N|B Chain B, Crystal Structure Of Ferrous Dioxygen Complex Of D251n
Cytochrome P450cam
Length = 415
Score = 33.5 bits (75), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 51/241 (21%), Positives = 93/241 (38%), Gaps = 46/241 (19%)
Query: 214 VLQMLKAVLSELIPLIKYLNLKIFDPRISQFFSNLVKTNLSY-----REKNNIKRDDFLN 268
+ +L + E IP +KYL ++ P S F+ + Y ++ D ++
Sbjct: 163 IFMLLAGLPEEDIPHLKYLTDQMTRPDGSMTFAEAKEALYDYLIPIIEQRRQKPGTDAIS 222
Query: 269 IMMQLQIAQRGKTLSPDDVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQS 328
I+ Q+ R +T D + GG T + L+F + LA++P+
Sbjct: 223 IVANGQVNGR---------PITSDEAKRMCGLLLVGGLNTVVNFLSFSMEFLAKSPE--- 270
Query: 329 KLRQEIMATKKKEGELTYEICHKMSYLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLT 388
RQE++ ++ + +E LR + SL RI Y+ +
Sbjct: 271 -HRQELIERPER--------------IPAACEELLRRF-SLVADGRILTSDYEF--HGVQ 312
Query: 389 LDVGTKISIPTFAIHYDPEYYPDPEKFDPERFSPENIE-SRPHYTYLPFGDGPRNCIGKI 447
L G +I +P D + E +P +++ SR ++ FG G C+G+
Sbjct: 313 LKKGDQILLPQMLSGLD----------ERENAAPMHVDFSRQKVSHTTFGHGSHLCLGQH 362
Query: 448 L 448
L
Sbjct: 363 L 363
>pdb|3FWG|A Chain A, Ferric Camphor Bound Cytochrome P450cam, Arg365leu,
Glu366gln, Monoclinic Crystal Form
pdb|3FWG|B Chain B, Ferric Camphor Bound Cytochrome P450cam, Arg365leu,
Glu366gln, Monoclinic Crystal Form
Length = 405
Score = 33.5 bits (75), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 51/241 (21%), Positives = 93/241 (38%), Gaps = 46/241 (19%)
Query: 214 VLQMLKAVLSELIPLIKYLNLKIFDPRISQFFSNLVKTNLSY-----REKNNIKRDDFLN 268
+ +L + E IP +KYL ++ P S F+ + Y ++ D ++
Sbjct: 153 IFMLLAGLPEEDIPHLKYLTDQMTRPDGSMTFAEAKEALYDYLIPIIEQRRQKPGTDAIS 212
Query: 269 IMMQLQIAQRGKTLSPDDVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQS 328
I+ Q+ R +T D + GG +T + L+F + LA++P+
Sbjct: 213 IVANGQVNGR---------PITSDEAKRMCGLLLVGGLDTVVNFLSFSMEFLAKSPE--- 260
Query: 329 KLRQEIMATKKKEGELTYEICHKMSYLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLT 388
RQE++ ++ + +E LR + SL RI Y+ +
Sbjct: 261 -HRQELIQRPER--------------IPAACEELLRRF-SLVADGRILTSDYEF--HGVQ 302
Query: 389 LDVGTKISIPTFAIHYDPEYYPDPEKFDPERFSPENIE-SRPHYTYLPFGDGPRNCIGKI 447
L G +I +P D + E P +++ SR ++ FG G C+G+
Sbjct: 303 LKKGDQILLPQMLSGLD----------ERENACPMHVDFSRQKVSHTTFGHGSHLCLGQH 352
Query: 448 L 448
L
Sbjct: 353 L 353
>pdb|1DZ8|A Chain A, Oxygen Complex Of P450cam From Pseudomonas Putida
pdb|1DZ8|B Chain B, Oxygen Complex Of P450cam From Pseudomonas Putida
pdb|1DZ6|A Chain A, Ferrous P450cam From Pseudomonas Putida
pdb|1DZ6|B Chain B, Ferrous P450cam From Pseudomonas Putida
pdb|1DZ9|A Chain A, Putative Oxo Complex Of P450cam From Pseudomonas Putida
pdb|1DZ9|B Chain B, Putative Oxo Complex Of P450cam From Pseudomonas Putida
pdb|1DZ4|A Chain A, Ferric P450cam From Pseudomonas Putida
pdb|1DZ4|B Chain B, Ferric P450cam From Pseudomonas Putida
pdb|1O76|A Chain A, Cyanide Complex Of P450cam From Pseudomonas Putida
pdb|1O76|B Chain B, Cyanide Complex Of P450cam From Pseudomonas Putida
pdb|1UYU|A Chain A, Xenon Complex Of Wildtype P450cam From Pseudomonas Putida
pdb|1UYU|B Chain B, Xenon Complex Of Wildtype P450cam From Pseudomonas Putida
pdb|1AKD|A Chain A, Cytochrome P450cam From Pseudomonas Putida, Complexed With
1s-Camphor
Length = 414
Score = 33.5 bits (75), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 51/241 (21%), Positives = 93/241 (38%), Gaps = 46/241 (19%)
Query: 214 VLQMLKAVLSELIPLIKYLNLKIFDPRISQFFSNLVKTNLSY-----REKNNIKRDDFLN 268
+ +L + E IP +KYL ++ P S F+ + Y ++ D ++
Sbjct: 162 IFMLLAGLPEEDIPHLKYLTDQMTRPDGSMTFAEAKEALYDYLIPIIEQRRQKPGTDAIS 221
Query: 269 IMMQLQIAQRGKTLSPDDVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQS 328
I+ Q+ R +T D + GG +T + L+F + LA++P+
Sbjct: 222 IVANGQVNGR---------PITSDEAKRMCGLLLVGGLDTVVNFLSFSMEFLAKSPE--- 269
Query: 329 KLRQEIMATKKKEGELTYEICHKMSYLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLT 388
RQE++ ++ + +E LR + SL RI Y+ +
Sbjct: 270 -HRQELIQRPER--------------IPAACEELLRRF-SLVADGRILTSDYEF--HGVQ 311
Query: 389 LDVGTKISIPTFAIHYDPEYYPDPEKFDPERFSPENIE-SRPHYTYLPFGDGPRNCIGKI 447
L G +I +P D + E P +++ SR ++ FG G C+G+
Sbjct: 312 LKKGDQILLPQMLSGLD----------ERENACPMHVDFSRQKVSHTTFGHGSHLCLGQH 361
Query: 448 L 448
L
Sbjct: 362 L 362
>pdb|2FE6|A Chain A, P450cam From Pseudomonas Putida Reconstituted With
Manganic Protoporphyrin Ix
Length = 421
Score = 33.5 bits (75), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 51/241 (21%), Positives = 93/241 (38%), Gaps = 46/241 (19%)
Query: 214 VLQMLKAVLSELIPLIKYLNLKIFDPRISQFFSNLVKTNLSY-----REKNNIKRDDFLN 268
+ +L + E IP +KYL ++ P S F+ + Y ++ D ++
Sbjct: 163 IFMLLAGLPEEDIPHLKYLTDQMTRPDGSMTFAEAKEALYDYLIPIIEQRRQKPGTDAIS 222
Query: 269 IMMQLQIAQRGKTLSPDDVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQS 328
I+ Q+ R +T D + GG +T + L+F + LA++P+
Sbjct: 223 IVANGQVNGR---------PITSDEAKRMCGLLLVGGLDTVVNFLSFSMEFLAKSPE--- 270
Query: 329 KLRQEIMATKKKEGELTYEICHKMSYLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLT 388
RQE++ ++ + +E LR + SL RI Y+ +
Sbjct: 271 -HRQELIERPER--------------IPAACEELLRRF-SLVADGRILTSDYEF--HGVQ 312
Query: 389 LDVGTKISIPTFAIHYDPEYYPDPEKFDPERFSPENIE-SRPHYTYLPFGDGPRNCIGKI 447
L G +I +P D + E P +++ SR ++ FG G C+G+
Sbjct: 313 LKKGDQILLPQMLSGLD----------ERENACPMHVDFSRQKVSHTTFGHGSHLCLGQH 362
Query: 448 L 448
L
Sbjct: 363 L 363
>pdb|1GEK|A Chain A, Structural Characterization Of N-Butyl-Isocyanide
Complexes Of Cytochromes P450nor And P450cam
pdb|1GEM|A Chain A, Structural Characterization Of N-Butyl-Isocyanide
Complexes Of Cytochromes P450nor And P450cam
pdb|1IWI|A Chain A, Putidaredoxin-Binding Stablilizes An Active Conformer Of
Cytochrome P450cam In Its Reduced State; Crystal
Structure Of Cytochrome P450cam
pdb|2ZAW|A Chain A, Crystal Structure Of Ferric Cytochrome P450cam
Reconstituted With 6- Methyl-6-Depropionated Hemin
pdb|2ZAX|A Chain A, Crystal Structure Of Ferric Cytochrome P450cam
pdb|2Z97|A Chain A, Crystal Structure Of Ferric Cytochrome P450cam
Reconstituted With 7- Methyl-7-Depropionated Hemin
pdb|2ZWT|A Chain A, Crystal Structure Of Ferric Cytochrome P450cam
pdb|2ZWU|A Chain A, Crystal Structure Of Camphor Soaked Ferric Cytochrome
P450cam
pdb|2L8M|A Chain A, Reduced And Co-Bound Cytochrome P450cam (Cyp101a1)
Length = 415
Score = 33.5 bits (75), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 51/241 (21%), Positives = 93/241 (38%), Gaps = 46/241 (19%)
Query: 214 VLQMLKAVLSELIPLIKYLNLKIFDPRISQFFSNLVKTNLSY-----REKNNIKRDDFLN 268
+ +L + E IP +KYL ++ P S F+ + Y ++ D ++
Sbjct: 163 IFMLLAGLPEEDIPHLKYLTDQMTRPDGSMTFAEAKEALYDYLIPIIEQRRQKPGTDAIS 222
Query: 269 IMMQLQIAQRGKTLSPDDVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQS 328
I+ Q+ R +T D + GG +T + L+F + LA++P+
Sbjct: 223 IVANGQVNGR---------PITSDEAKRMCGLLLVGGLDTVVNFLSFSMEFLAKSPE--- 270
Query: 329 KLRQEIMATKKKEGELTYEICHKMSYLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLT 388
RQE++ ++ + +E LR + SL RI Y+ +
Sbjct: 271 -HRQELIERPER--------------IPAACEELLRRF-SLVADGRILTSDYEF--HGVQ 312
Query: 389 LDVGTKISIPTFAIHYDPEYYPDPEKFDPERFSPENIE-SRPHYTYLPFGDGPRNCIGKI 447
L G +I +P D + E P +++ SR ++ FG G C+G+
Sbjct: 313 LKKGDQILLPQMLSGLD----------ERENACPMHVDFSRQKVSHTTFGHGSHLCLGQH 362
Query: 448 L 448
L
Sbjct: 363 L 363
>pdb|1P2Y|A Chain A, Crystal Structure Of Cytochrome P450cam In Complex With
(S)- (-)-Nicotine
pdb|1P7R|A Chain A, Crystal Structure Of Reduced, Co-Exposed Complex Of
Cytochrome P450cam With (S)-(-)-Nicotine
Length = 420
Score = 33.5 bits (75), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 51/241 (21%), Positives = 93/241 (38%), Gaps = 46/241 (19%)
Query: 214 VLQMLKAVLSELIPLIKYLNLKIFDPRISQFFSNLVKTNLSY-----REKNNIKRDDFLN 268
+ +L + E IP +KYL ++ P S F+ + Y ++ D ++
Sbjct: 162 IFMLLAGLPEEDIPHLKYLTDQMTRPDGSMTFAEAKEALYDYLIPIIEQRRQKPGTDAIS 221
Query: 269 IMMQLQIAQRGKTLSPDDVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQS 328
I+ Q+ R +T D + GG +T + L+F + LA++P+
Sbjct: 222 IVANGQVNGR---------PITSDEAKRMCGLLLVGGLDTVVNFLSFSMEFLAKSPE--- 269
Query: 329 KLRQEIMATKKKEGELTYEICHKMSYLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLT 388
RQE++ ++ + +E LR + SL RI Y+ +
Sbjct: 270 -HRQELIERPER--------------IPAACEELLRRF-SLVADGRILTSDYEF--HGVQ 311
Query: 389 LDVGTKISIPTFAIHYDPEYYPDPEKFDPERFSPENIE-SRPHYTYLPFGDGPRNCIGKI 447
L G +I +P D + E P +++ SR ++ FG G C+G+
Sbjct: 312 LKKGDQILLPQMLSGLD----------ERENACPMHVDFSRQKVSHTTFGHGSHLCLGQH 361
Query: 448 L 448
L
Sbjct: 362 L 362
>pdb|1IWJ|A Chain A, Putidaredoxin-Binding Stablilizes An Active Conformer Of
Cytochrome P450cam In Its Reduced State; Crystal
Structure Of Mutant(109k) Cytochrome P450cam
Length = 415
Score = 33.5 bits (75), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 51/241 (21%), Positives = 93/241 (38%), Gaps = 46/241 (19%)
Query: 214 VLQMLKAVLSELIPLIKYLNLKIFDPRISQFFSNLVKTNLSY-----REKNNIKRDDFLN 268
+ +L + E IP +KYL ++ P S F+ + Y ++ D ++
Sbjct: 163 IFMLLAGLPEEDIPHLKYLTDQMTRPDGSMTFAEAKEALYDYLIPIIEQRRQKPGTDAIS 222
Query: 269 IMMQLQIAQRGKTLSPDDVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQS 328
I+ Q+ R +T D + GG +T + L+F + LA++P+
Sbjct: 223 IVANGQVNGR---------PITSDEAKRMCGLLLVGGLDTVVNFLSFSMEFLAKSPE--- 270
Query: 329 KLRQEIMATKKKEGELTYEICHKMSYLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLT 388
RQE++ ++ + +E LR + SL RI Y+ +
Sbjct: 271 -HRQELIERPER--------------IPAACEELLRRF-SLVADGRILTSDYEF--HGVQ 312
Query: 389 LDVGTKISIPTFAIHYDPEYYPDPEKFDPERFSPENIE-SRPHYTYLPFGDGPRNCIGKI 447
L G +I +P D + E P +++ SR ++ FG G C+G+
Sbjct: 313 LKKGDQILLPQMLSGLD----------ERENACPMHVDFSRQKVSHTTFGHGSHLCLGQH 362
Query: 448 L 448
L
Sbjct: 363 L 363
>pdb|1IWK|A Chain A, Putidaredoxin-Binding Stablilizes An Active Conformer Of
Cytochrome P450cam In Its Reduced State; Crystal
Structure Of Mutant(112k) Cytochrome P450cam
Length = 415
Score = 33.5 bits (75), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 51/241 (21%), Positives = 93/241 (38%), Gaps = 46/241 (19%)
Query: 214 VLQMLKAVLSELIPLIKYLNLKIFDPRISQFFSNLVKTNLSY-----REKNNIKRDDFLN 268
+ +L + E IP +KYL ++ P S F+ + Y ++ D ++
Sbjct: 163 IFMLLAGLPEEDIPHLKYLTDQMTRPDGSMTFAEAKEALYDYLIPIIEQRRQKPGTDAIS 222
Query: 269 IMMQLQIAQRGKTLSPDDVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQS 328
I+ Q+ R +T D + GG +T + L+F + LA++P+
Sbjct: 223 IVANGQVNGR---------PITSDEAKRMCGLLLVGGLDTVVNFLSFSMEFLAKSPE--- 270
Query: 329 KLRQEIMATKKKEGELTYEICHKMSYLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLT 388
RQE++ ++ + +E LR + SL RI Y+ +
Sbjct: 271 -HRQELIERPER--------------IPAACEELLRRF-SLVADGRILTSDYEF--HGVQ 312
Query: 389 LDVGTKISIPTFAIHYDPEYYPDPEKFDPERFSPENIE-SRPHYTYLPFGDGPRNCIGKI 447
L G +I +P D + E P +++ SR ++ FG G C+G+
Sbjct: 313 LKKGDQILLPQMLSGLD----------ERENACPMHVDFSRQKVSHTTFGHGSHLCLGQH 362
Query: 448 L 448
L
Sbjct: 363 L 363
>pdb|1RE9|A Chain A, Crystal Structure Of Cytochrome P450-cam With A
Fluorescent Probe D-8-ad (adamantane-1-carboxylic
Acid-5-dimethylamino-
Naphthalene-1-sulfonylamino-octyl-amide)
pdb|1YRC|A Chain A, X-ray Crystal Structure Of Hydrogenated Cytochrome P450cam
pdb|1YRD|A Chain A, X-Ray Crystal Structure Of Perdeuterated Cytochrome
P450cam
pdb|2H7Q|A Chain A, Cytochrome P450cam Complexed With Imidazole
pdb|1CP4|A Chain A, Formation, Crystal Structure, And Rearrangement Of A
Cytochrome P450-Cam Iron-Phenyl Complex
pdb|1NOO|A Chain A, Cytochrome P450-Cam Complexed With 5-Exo-Hydroxycamphor
pdb|1PHA|A Chain A, Inhibitor-Induced Conformational Change In Cytochrome
P450- Cam
pdb|1PHB|A Chain A, Inhibitor-Induced Conformational Change In Cytochrome
P450- Cam
pdb|1PHC|A Chain A, Crystal Structure Of Substrate-free Pseudomonas Putida
Cytochrome P450
pdb|1PHD|A Chain A, Crystal Structures Of Metyrapone-And
Phenylimidazole-Inhibited Complexes Of Cytochrome
P450-Cam
pdb|1PHE|A Chain A, Crystal Structures Of Metyrapone-And
Phenylimidazole-Inhibited Complexes Of Cytochrome
P450-Cam
pdb|1PHF|A Chain A, Crystal Structures Of Metyrapone-And Phenylimidazole-
Inhibited Complexes Of Cytochrome P450-Cam
pdb|1PHG|A Chain A, Crystal Structures Of Metyrapone-And Phenylimidazole-
Inhibited Complexes Of Cytochrome P450-Cam
pdb|2CPP|A Chain A, High-Resolution Crystal Structure Of Cytochrome P450-Cam
pdb|3CP4|A Chain A, Crystal Structure Of The Cytochrome P450-Cam Active Site
Mutant Thr252ala
pdb|3CPP|A Chain A, Crystal Structure Of The Carbon
Monoxy-Substrate-Cytochrome P450-Cam Ternary Complex
pdb|4CP4|A Chain A, Crystal Structure Of The Cytochrome P450-Cam Active Site
Mutant Thr252ala
pdb|4CPP|A Chain A, Crystal Structures Of Cytochrome P450-Cam Complexed With
Camphane, Thiocamphor, And Adamantane: Factors
Controlling P450 Substrate Hydroxylation
pdb|5CP4|A Chain A, Cryogenic Structure Of P450cam
pdb|5CPP|A Chain A, The Structural Basis For Substrate-Induced Changes In
Redox Potential And Spin Equilibrium In Cytochrome
P-450(Cam)
pdb|6CPP|A Chain A, Crystal Structures Of Cytochrome P450-Cam Complexed With
Camphane, Thiocamphor, And Adamantane: Factors
Controlling P450 Substrate Hydroxylation
pdb|7CPP|A Chain A, The Structural Basis For Substrate-Induced Changes In
Redox Potential And Spin Equilibrium In Cytochrome
P450(Cam)
pdb|8CPP|A Chain A, Crystal Structures Of Cytochrome P450-Cam Complexed With
Camphane, Thiocamphor, And Adamantane: Factors
Controlling P450 Substrate Hydroxylation
Length = 414
Score = 33.5 bits (75), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 51/241 (21%), Positives = 93/241 (38%), Gaps = 46/241 (19%)
Query: 214 VLQMLKAVLSELIPLIKYLNLKIFDPRISQFFSNLVKTNLSY-----REKNNIKRDDFLN 268
+ +L + E IP +KYL ++ P S F+ + Y ++ D ++
Sbjct: 162 IFMLLAGLPEEDIPHLKYLTDQMTRPDGSMTFAEAKEALYDYLIPIIEQRRQKPGTDAIS 221
Query: 269 IMMQLQIAQRGKTLSPDDVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQS 328
I+ Q+ R +T D + GG +T + L+F + LA++P+
Sbjct: 222 IVANGQVNGR---------PITSDEAKRMCGLLLVGGLDTVVNFLSFSMEFLAKSPE--- 269
Query: 329 KLRQEIMATKKKEGELTYEICHKMSYLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLT 388
RQE++ ++ + +E LR + SL RI Y+ +
Sbjct: 270 -HRQELIERPER--------------IPAACEELLRRF-SLVADGRILTSDYEF--HGVQ 311
Query: 389 LDVGTKISIPTFAIHYDPEYYPDPEKFDPERFSPENIE-SRPHYTYLPFGDGPRNCIGKI 447
L G +I +P D + E P +++ SR ++ FG G C+G+
Sbjct: 312 LKKGDQILLPQMLSGLD----------ERENACPMHVDFSRQKVSHTTFGHGSHLCLGQH 361
Query: 448 L 448
L
Sbjct: 362 L 362
>pdb|1LWL|A Chain A, Crystal Structure Of Cytochrome P450-Cam With A
Fluorescent Probe D-8-Ad (Adamantane-1-Carboxylic
Acid-5-Dimethylamino-
Naphthalene-1-Sulfonylamino-Octyl-Amide)
pdb|1RF9|A Chain A, Crystal Structure Of Cytochrome P450-Cam With A
Fluorescent Probe D-4-Ad (Adamantane-1-Carboxylic
Acid-5-Dimethylamino-
Naphthalene-1-Sulfonylamino-Butyl-Amide)
Length = 417
Score = 33.5 bits (75), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 51/241 (21%), Positives = 93/241 (38%), Gaps = 46/241 (19%)
Query: 214 VLQMLKAVLSELIPLIKYLNLKIFDPRISQFFSNLVKTNLSY-----REKNNIKRDDFLN 268
+ +L + E IP +KYL ++ P S F+ + Y ++ D ++
Sbjct: 163 IFMLLAGLPEEDIPHLKYLTDQMTRPDGSMTFAEAKEALYDYLIPIIEQRRQKPGTDAIS 222
Query: 269 IMMQLQIAQRGKTLSPDDVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQS 328
I+ Q+ R +T D + GG +T + L+F + LA++P+
Sbjct: 223 IVANGQVNGR---------PITSDEAKRMCGLLLVGGLDTVVNFLSFSMEFLAKSPE--- 270
Query: 329 KLRQEIMATKKKEGELTYEICHKMSYLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLT 388
RQE++ ++ + +E LR + SL RI Y+ +
Sbjct: 271 -HRQELIERPER--------------IPAACEELLRRF-SLVADGRILTSDYEF--HGVQ 312
Query: 389 LDVGTKISIPTFAIHYDPEYYPDPEKFDPERFSPENIE-SRPHYTYLPFGDGPRNCIGKI 447
L G +I +P D + E P +++ SR ++ FG G C+G+
Sbjct: 313 LKKGDQILLPQMLSGLD----------ERENACPMHVDFSRQKVSHTTFGHGSHLCLGQH 362
Query: 448 L 448
L
Sbjct: 363 L 363
>pdb|2LQD|A Chain A, Reduced And Co-Bound Cytochrome P450cam (Cyp101a1)
Length = 405
Score = 33.5 bits (75), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 51/241 (21%), Positives = 93/241 (38%), Gaps = 46/241 (19%)
Query: 214 VLQMLKAVLSELIPLIKYLNLKIFDPRISQFFSNLVKTNLSY-----REKNNIKRDDFLN 268
+ +L + E IP +KYL ++ P S F+ + Y ++ D ++
Sbjct: 153 IFMLLAGLPEEDIPHLKYLTDQMTRPDGSMTFAEAKEALYDYLIPIIEQRRQKPGTDAIS 212
Query: 269 IMMQLQIAQRGKTLSPDDVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQS 328
I+ Q+ R +T D + GG +T + L+F + LA++P+
Sbjct: 213 IVANGQVNGR---------PITSDEAKRMCGLLLVGGLDTVVNFLSFSMEFLAKSPE--- 260
Query: 329 KLRQEIMATKKKEGELTYEICHKMSYLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLT 388
RQE++ ++ + +E LR + SL RI Y+ +
Sbjct: 261 -HRQELIERPER--------------IPAACEELLRRF-SLVADGRILTSDYEF--HGVQ 302
Query: 389 LDVGTKISIPTFAIHYDPEYYPDPEKFDPERFSPENIE-SRPHYTYLPFGDGPRNCIGKI 447
L G +I +P D + E P +++ SR ++ FG G C+G+
Sbjct: 303 LKKGDQILLPQMLSGLD----------ERENACPMHVDFSRQKVSHTTFGHGSHLCLGQH 352
Query: 448 L 448
L
Sbjct: 353 L 353
>pdb|2FER|A Chain A, P450cam From Pseudomonas Putida Reconstituted With
Manganic Protoporphyrin Ix
pdb|2FEU|A Chain A, P450cam From Pseudomonas Putida Reconstituted With
Manganic Protoporphyrin Ix
pdb|2FEU|B Chain B, P450cam From Pseudomonas Putida Reconstituted With
Manganic Protoporphyrin Ix
Length = 411
Score = 33.5 bits (75), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 51/241 (21%), Positives = 93/241 (38%), Gaps = 46/241 (19%)
Query: 214 VLQMLKAVLSELIPLIKYLNLKIFDPRISQFFSNLVKTNLSY-----REKNNIKRDDFLN 268
+ +L + E IP +KYL ++ P S F+ + Y ++ D ++
Sbjct: 153 IFMLLAGLPEEDIPHLKYLTDQMTRPDGSMTFAEAKEALYDYLIPIIEQRRQKPGTDAIS 212
Query: 269 IMMQLQIAQRGKTLSPDDVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQS 328
I+ Q+ R +T D + GG +T + L+F + LA++P+
Sbjct: 213 IVANGQVNGR---------PITSDEAKRMCGLLLVGGLDTVVNFLSFSMEFLAKSPE--- 260
Query: 329 KLRQEIMATKKKEGELTYEICHKMSYLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLT 388
RQE++ ++ + +E LR + SL RI Y+ +
Sbjct: 261 -HRQELIERPER--------------IPAACEELLRRF-SLVADGRILTSDYEF--HGVQ 302
Query: 389 LDVGTKISIPTFAIHYDPEYYPDPEKFDPERFSPENIE-SRPHYTYLPFGDGPRNCIGKI 447
L G +I +P D + E P +++ SR ++ FG G C+G+
Sbjct: 303 LKKGDQILLPQMLSGLD----------ERENACPMHVDFSRQKVSHTTFGHGSHLCLGQH 352
Query: 448 L 448
L
Sbjct: 353 L 353
>pdb|4EK1|A Chain A, Crystal Structure Of Electron-Spin Labeled Cytochrome
P450cam
pdb|4EK1|B Chain B, Crystal Structure Of Electron-Spin Labeled Cytochrome
P450cam
Length = 414
Score = 32.7 bits (73), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 50/241 (20%), Positives = 94/241 (39%), Gaps = 46/241 (19%)
Query: 214 VLQMLKAVLSELIPLIKYLNLKIFDPRISQFFSNLVKTNLSY-----REKNNIKRDDFLN 268
+ +L + E IP +KYL ++ P F+ + Y ++ D ++
Sbjct: 162 IFMLLAGLPEEDIPHLKYLTDQMTRPDGCMTFAEAKEALYDYLIPIIEQRRQKPGTDAIS 221
Query: 269 IMMQLQIAQRGKTLSPDDVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQS 328
I+ Q+ R +T D + GG +T + L+F + LA++P+
Sbjct: 222 IVANGQVNGR---------PITSDEAKRMCGLLLVGGLDTVVNFLSFSMEFLAKSPE--- 269
Query: 329 KLRQEIMATKKKEGELTYEICHKMSYLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLT 388
RQE++ ++ + ++E LR + SL RI Y+ +
Sbjct: 270 -HRQELIERPER--------------IPAASEELLRRF-SLVADGRILTSDYEF--HGVQ 311
Query: 389 LDVGTKISIPTFAIHYDPEYYPDPEKFDPERFSPENIE-SRPHYTYLPFGDGPRNCIGKI 447
L G +I +P D + E +P +++ SR ++ FG G C+G+
Sbjct: 312 LKKGDQILLPQMLSGLD----------ERENAAPMHVDFSRQKVSHTTFGHGSHLCLGQH 361
Query: 448 L 448
L
Sbjct: 362 L 362
>pdb|6CP4|A Chain A, P450cam D251n Mutant
Length = 414
Score = 32.7 bits (73), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 51/241 (21%), Positives = 92/241 (38%), Gaps = 46/241 (19%)
Query: 214 VLQMLKAVLSELIPLIKYLNLKIFDPRISQFFSNLVKTNLSY-----REKNNIKRDDFLN 268
+ +L + E IP +KYL ++ P S F+ + Y ++ D ++
Sbjct: 162 IFMLLAGLPEEDIPHLKYLTDQMTRPDGSMTFAEAKEALYDYLIPIIEQRRQKPGTDAIS 221
Query: 269 IMMQLQIAQRGKTLSPDDVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQS 328
I+ Q+ R +T D + GG T + L+F + LA++P+
Sbjct: 222 IVANGQVNGR---------PITSDEAKRMCGLLLVGGLNTVVNFLSFSMEFLAKSPE--- 269
Query: 329 KLRQEIMATKKKEGELTYEICHKMSYLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLT 388
RQE++ ++ + +E LR + SL RI Y+ +
Sbjct: 270 -HRQELIERPER--------------IPAACEELLRRF-SLVADGRILTSDYEF--HGVQ 311
Query: 389 LDVGTKISIPTFAIHYDPEYYPDPEKFDPERFSPENIE-SRPHYTYLPFGDGPRNCIGKI 447
L G +I +P D + E P +++ SR ++ FG G C+G+
Sbjct: 312 LKKGDQILLPQMLSGLD----------ERENACPMHVDFSRQKVSHTTFGHGSHLCLGQH 361
Query: 448 L 448
L
Sbjct: 362 L 362
>pdb|2FR7|A Chain A, Crystal Structure Of Cytochrome P450 Cyp199a2
pdb|4DNJ|A Chain A, The Crystal Structures Of 4-Methoxybenzoate Bound Cyp199a2
Length = 412
Score = 32.7 bits (73), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 30/144 (20%), Positives = 60/144 (41%), Gaps = 29/144 (20%)
Query: 305 GYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSYLDKVTKEALR 364
G +T+ + + +Y LAR PD ++LR + S +EA+R
Sbjct: 252 GLDTTVNGIAAAVYCLARFPDEFARLRAD------------------PSLARNAFEEAVR 293
Query: 365 MYPSLPQLDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPEYYPDPEKFDPERFSPEN 424
+ R + + +L T+ G K+ + + + DP + DP+++D
Sbjct: 294 FESPVQTFFRTTTRDVELAGA--TIGEGEKVLMFLGSANRDPRRWDDPDRYD-------- 343
Query: 425 IESRPHYTYLPFGDGPRNCIGKIL 448
+R ++ FG G C+G+++
Sbjct: 344 -ITRKTSGHVGFGSGVHMCVGQLV 366
>pdb|3EJB|B Chain B, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|D Chain D, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|F Chain F, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|H Chain H, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|B Chain B, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|D Chain D, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|F Chain F, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|H Chain H, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|B Chain B, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|D Chain D, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|F Chain F, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|H Chain H, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
Length = 404
Score = 32.7 bits (73), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 37/163 (22%), Positives = 73/163 (44%), Gaps = 33/163 (20%)
Query: 288 EMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQ--EIMATKKKEGELT 345
++T++ + + G+ET+ ++++ + L ++P+ KLR+ +++ T +E L
Sbjct: 218 KLTEEEAASTCILLAIAGHETTVNLISNSVLCLLQHPEQLLKLRENPDLIGTAVEEC-LR 276
Query: 346 YEICHKMSYLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYD 405
YE +M+ +V E + + +T+ G ++ + A + D
Sbjct: 277 YESPTQMT--ARVASEDIDI-------------------CGVTIRQGEQVYLLLGAANRD 315
Query: 406 PEYYPDPEKFDPERFSPENIESRPHYTYLPFGDGPRNCIGKIL 448
P + +P+ FD R SP PH L FG G C+G L
Sbjct: 316 PSIFTNPDVFDITR-SPN-----PH---LSFGHGHHVCLGSSL 349
>pdb|2A1O|A Chain A, Crystal Structure Of Ferrous Dioxygen Complex Of T252a
Cytochrome P450cam
pdb|2A1O|B Chain B, Crystal Structure Of Ferrous Dioxygen Complex Of T252a
Cytochrome P450cam
Length = 415
Score = 32.3 bits (72), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 50/241 (20%), Positives = 93/241 (38%), Gaps = 46/241 (19%)
Query: 214 VLQMLKAVLSELIPLIKYLNLKIFDPRISQFFSNLVKTNLSY-----REKNNIKRDDFLN 268
+ +L + E IP +KYL ++ P S F+ + Y ++ D ++
Sbjct: 163 IFMLLAGLPEEDIPHLKYLTDQMTRPDGSMTFAEAKEALYDYLIPIIEQRRQKPGTDAIS 222
Query: 269 IMMQLQIAQRGKTLSPDDVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQS 328
I+ Q+ R +T D + GG + + L+F + LA++P+
Sbjct: 223 IVANGQVNGR---------PITSDEAKRMCGLLLVGGLDAVVNFLSFSMEFLAKSPE--- 270
Query: 329 KLRQEIMATKKKEGELTYEICHKMSYLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLT 388
RQE++ ++ + +E LR + SL RI Y+ +
Sbjct: 271 -HRQELIERPER--------------IPAACEELLRRF-SLVADGRILTSDYEF--HGVQ 312
Query: 389 LDVGTKISIPTFAIHYDPEYYPDPEKFDPERFSPENIE-SRPHYTYLPFGDGPRNCIGKI 447
L G +I +P D + E +P +++ SR ++ FG G C+G+
Sbjct: 313 LKKGDQILLPQMLSGLD----------ERENAAPMHVDFSRQKVSHTTFGHGSHLCLGQH 362
Query: 448 L 448
L
Sbjct: 363 L 363
>pdb|1T85|A Chain A, Crystal Structure Of The Ferrous Co-Bound Cytochrome
P450cam Mutant (L358pC334A)
pdb|1T86|A Chain A, Crystal Structure Of The Ferrous Cytochrome P450cam Mutant
(L358pC334A)
pdb|1T86|B Chain B, Crystal Structure Of The Ferrous Cytochrome P450cam Mutant
(L358pC334A)
Length = 414
Score = 32.3 bits (72), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 51/241 (21%), Positives = 93/241 (38%), Gaps = 46/241 (19%)
Query: 214 VLQMLKAVLSELIPLIKYLNLKIFDPRISQFFSNLVKTNLSY-----REKNNIKRDDFLN 268
+ +L + E IP +KYL ++ P S F+ + Y ++ D ++
Sbjct: 162 IFMLLAGLPEEDIPHLKYLTDQMTRPDGSMTFAEAKEALYDYLIPIIEQRRQKPGTDAIS 221
Query: 269 IMMQLQIAQRGKTLSPDDVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQS 328
I+ Q+ R +T D + GG +T + L+F + LA++P+
Sbjct: 222 IVANGQVNGR---------PITSDEAKRMCGLLLVGGLDTVVNFLSFSMEFLAKSPE--- 269
Query: 329 KLRQEIMATKKKEGELTYEICHKMSYLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLT 388
RQE++ ++ + +E LR + SL RI Y+ +
Sbjct: 270 -HRQELIERPER--------------IPAACEELLRRF-SLVADGRILTSDYEF--HGVQ 311
Query: 389 LDVGTKISIPTFAIHYDPEYYPDPEKFDPERFSPENIE-SRPHYTYLPFGDGPRNCIGKI 447
L G +I +P D + E +P +++ SR ++ FG G C G+
Sbjct: 312 LKKGDQILLPQMLSGLD----------ERENAAPMHVDFSRQKVSHTTFGHGSHLCPGQH 361
Query: 448 L 448
L
Sbjct: 362 L 362
>pdb|2Z3T|A Chain A, Crystal Structure Of Substrate Free Cytochrome P450 Stap
(cyp245a1)
pdb|2Z3T|B Chain B, Crystal Structure Of Substrate Free Cytochrome P450 Stap
(cyp245a1)
pdb|2Z3T|C Chain C, Crystal Structure Of Substrate Free Cytochrome P450 Stap
(cyp245a1)
pdb|2Z3T|D Chain D, Crystal Structure Of Substrate Free Cytochrome P450 Stap
(cyp245a1)
pdb|2Z3U|A Chain A, Crystal Structure Of Chromopyrrolic Acid Bound Cytochrome
P450 Stap (Cyp245a1)
pdb|3A1L|A Chain A, Crystal Structure Of 11,11'-Dichlorochromopyrrolic Acid
Bound Cytochrome P450 Stap (Cyp245a1)
Length = 425
Score = 32.3 bits (72), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 31/157 (19%), Positives = 59/157 (37%), Gaps = 29/157 (18%)
Query: 292 DVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHK 351
D I G+ET+++ L + L + D+ +LR +T
Sbjct: 242 DGIVGTCVHLLTAGHETTTNFLAKAVLTLRAHRDVLDELRTTPESTPA------------ 289
Query: 352 MSYLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPEYYPD 411
+E +R P + + R + + +L + D+ G+++ + + DP +PD
Sbjct: 290 ------AVEELMRYDPPVQAVTRWAYEDIRLGDHDIPR--GSRVVALLGSANRDPARFPD 341
Query: 412 PEKFDPERFSPENIESRPHYTYLPFGDGPRNCIGKIL 448
P+ D R + + FG G C+G L
Sbjct: 342 PDVLDVHRAAERQVG---------FGLGIHYCLGATL 369
>pdb|3BUJ|A Chain A, Crystal Structure Of Calo2
Length = 397
Score = 32.0 bits (71), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 64/164 (39%), Gaps = 37/164 (22%)
Query: 289 MTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEI 348
M+ + I + F F G+ET +S + + L +PD LR+
Sbjct: 218 MSRNEIVSTVVTFIFTGHETVASQVGNAVLSLLAHPDQLDLLRR---------------- 261
Query: 349 CHKMSYLDKVTKEALRMYPSLP----QLDRISVKKYKLPNTDLTLDVGTKISIPTFAIHY 404
+ L + +E LR PS+ QLD + V+ + + + A +
Sbjct: 262 --RPDLLAQAVEECLRYDPSVQSNTRQLD-VDVELRGRRLRRDDV-----VVVLAGAANR 313
Query: 405 DPEYYPDPEKFDPERFSPENIESRPHYTYLPFGDGPRNCIGKIL 448
DP Y P+ FD ER + + S + FG G R C+G L
Sbjct: 314 DPRRYDRPDDFDIER---DPVPS------MSFGAGMRYCLGSYL 348
>pdb|2CP4|A Chain A, Crystal Structure Of The Cytochrome P450-Cam Active Site
Mutant Thr252ala
Length = 414
Score = 32.0 bits (71), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 50/241 (20%), Positives = 92/241 (38%), Gaps = 46/241 (19%)
Query: 214 VLQMLKAVLSELIPLIKYLNLKIFDPRISQFFSNLVKTNLSY-----REKNNIKRDDFLN 268
+ +L + E IP +KYL ++ P S F+ + Y ++ D ++
Sbjct: 162 IFMLLAGLPEEDIPHLKYLTDQMTRPDGSMTFAEAKEALYDYLIPIIEQRRQKPGTDAIS 221
Query: 269 IMMQLQIAQRGKTLSPDDVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQS 328
I+ Q+ R +T D + GG + + L+F + LA++P+
Sbjct: 222 IVANGQVNGR---------PITSDEAKRMCGLLLVGGLDAVVNFLSFSMEFLAKSPE--- 269
Query: 329 KLRQEIMATKKKEGELTYEICHKMSYLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLT 388
RQE++ ++ + +E LR + SL RI Y+ +
Sbjct: 270 -HRQELIERPER--------------IPAACEELLRRF-SLVADGRILTSDYEF--HGVQ 311
Query: 389 LDVGTKISIPTFAIHYDPEYYPDPEKFDPERFSPENIE-SRPHYTYLPFGDGPRNCIGKI 447
L G +I +P D + E P +++ SR ++ FG G C+G+
Sbjct: 312 LKKGDQILLPQMLSGLD----------ERENACPMHVDFSRQKVSHTTFGHGSHLCLGQH 361
Query: 448 L 448
L
Sbjct: 362 L 362
>pdb|1GEB|A Chain A, X-Ray Crystal Structure And Catalytic Properties Of
Thr252ile Mutant Of Cytochrome P450cam
Length = 415
Score = 31.2 bits (69), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 50/241 (20%), Positives = 92/241 (38%), Gaps = 46/241 (19%)
Query: 214 VLQMLKAVLSELIPLIKYLNLKIFDPRISQFFSNLVKTNLSY-----REKNNIKRDDFLN 268
+ +L + E IP +KYL ++ P S F+ + Y ++ D ++
Sbjct: 163 IFMLLAGLPEEDIPHLKYLTDQMTRPDGSMTFAEAKEALYDYLIPIIEQRRQKPGTDAIS 222
Query: 269 IMMQLQIAQRGKTLSPDDVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQS 328
I+ Q+ R +T D + GG + + L+F + LA++P+
Sbjct: 223 IVANGQVNGR---------PITSDEAKRMCGLLLVGGLDIVVNFLSFSMEFLAKSPE--- 270
Query: 329 KLRQEIMATKKKEGELTYEICHKMSYLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLT 388
RQE++ ++ + +E LR + SL RI Y+ +
Sbjct: 271 -HRQELIERPER--------------IPAACEELLRRF-SLVADGRILTSDYEF--HGVQ 312
Query: 389 LDVGTKISIPTFAIHYDPEYYPDPEKFDPERFSPENIE-SRPHYTYLPFGDGPRNCIGKI 447
L G +I +P D + E P +++ SR ++ FG G C+G+
Sbjct: 313 LKKGDQILLPQMLSGLD----------ERENACPMHVDFSRQKVSHTTFGHGSHLCLGQH 362
Query: 448 L 448
L
Sbjct: 363 L 363
>pdb|3NC3|A Chain A, Cyp134a1 Structure With A Closed Substrate Binding Loop
pdb|3NC3|B Chain B, Cyp134a1 Structure With A Closed Substrate Binding Loop
pdb|3NC5|A Chain A, Cyp134a1 Structure With An Open Substrate Binding Loop
pdb|3NC5|B Chain B, Cyp134a1 Structure With An Open Substrate Binding Loop
pdb|3NC6|A Chain A, Cyp134a1 1-Phenylimidazole Bound Structure
pdb|3NC6|B Chain B, Cyp134a1 1-Phenylimidazole Bound Structure
pdb|3NC7|A Chain A, Cyp134a1 2-Phenylimidazole Bound Structure
pdb|3NC7|B Chain B, Cyp134a1 2-Phenylimidazole Bound Structure
Length = 441
Score = 30.8 bits (68), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 33/165 (20%), Positives = 61/165 (36%), Gaps = 27/165 (16%)
Query: 285 DDVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGEL 344
+ + ++D I A E + L +Y L NP E
Sbjct: 250 EGMALSDKDILALILNVLLAATEPADKTLALMIYHLLNNP------------------EQ 291
Query: 345 TYEICHKMSYLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKISIPTFAIHY 404
++ S + + E LR P + + R + + ++ D T + A +
Sbjct: 292 MNDVLADRSLVPRAIAETLRYKPPVQLIPRQLSQDTVVGGMEIKKD--TIVFCMIGAANR 349
Query: 405 DPEYYPDPEKFDPERFSPENIESRPHYT----YLPFGDGPRNCIG 445
DPE + P+ F+ R E++ + ++ +L FG G NC+G
Sbjct: 350 DPEAFEQPDVFNIHR---EDLGIKSAFSGAARHLAFGSGIHNCVG 391
>pdb|3TYW|A Chain A, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|3TYW|B Chain B, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|3TYW|C Chain C, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|3TYW|D Chain D, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|4FXB|A Chain A, Crystal Structure Of Cyp105n1 From Streptomyces
Coelicolor: A Cytochrome P450 Oxidase In The Coelibactin
Siderophore Biosynthetic Pathway
pdb|4FXB|B Chain B, Crystal Structure Of Cyp105n1 From Streptomyces
Coelicolor: A Cytochrome P450 Oxidase In The Coelibactin
Siderophore Biosynthetic Pathway
Length = 417
Score = 30.4 bits (67), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 70/328 (21%), Positives = 125/328 (38%), Gaps = 75/328 (22%)
Query: 125 RLRNKLSPTFTSGKIKYMFPLIKKCSDQLITTIRKQIGESKQMSLEVKDYCARYTTDVIG 184
R R L P FT +++ M P ++ D+++ + G +S Y +T VI
Sbjct: 109 RYRRMLLPAFTVRRVRAMRPAVQARVDEILDGMLAAGGPVDLVSA----YANAVSTSVI- 163
Query: 185 TTAFGIEINSLENPDSEFRQVSLLV--MKPSVLQMLKAVLSELIPLIKYLNLKIFDPRIS 242
GI + LE FR V+ + + Q+ +A+ L + + +PR
Sbjct: 164 CELLGIPRHDLEF----FRDVTRISGSRNSTAEQVSEALGGLFGLLGGLVAERREEPR-D 218
Query: 243 QFFSNLVKTNLSYREKNNIKRDDFLNIMMQLQIAQRGKTLSPDDVEMTDDVITAQSFVFF 302
S LV +L N+ + L+ + G T++
Sbjct: 219 DLISKLVTDHLV---PGNVTTEQLLSTL--------GITIN------------------- 248
Query: 303 FGGYETSSSVLTFCLYELARNPDIQSKLRQE--IMATKKKEGELTYEICHKMSYLDKVTK 360
G ET++S++ L P++ ++LR++ +M E + +S D
Sbjct: 249 -AGRETTTSMIALSTLLLLDRPELPAELRKDPDLMPAAVDE------LLRVLSVAD---- 297
Query: 361 EALRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPEYYPDPEKFDPERF 420
S+P R++ + +L + D G I++ A H DPE + DPE+ D R
Sbjct: 298 -------SIPL--RVAAEDIELSGRTVPADDGV-IALLAGANH-DPEQFDDPERVDFHRT 346
Query: 421 SPENIESRPHYTYLPFGDGPRNCIGKIL 448
++ FG G C+G+ L
Sbjct: 347 DNHHVA---------FGYGVHQCVGQHL 365
>pdb|3FWF|A Chain A, Ferric Camphor Bound Cytochrome P450cam Containing A
Selenocysteine As The 5th Heme Ligand, Monoclinic
Crystal Form
pdb|3FWF|B Chain B, Ferric Camphor Bound Cytochrome P450cam Containing A
Selenocysteine As The 5th Heme Ligand, Monoclinic
Crystal Form
Length = 405
Score = 29.6 bits (65), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 27/124 (21%), Positives = 52/124 (41%), Gaps = 14/124 (11%)
Query: 214 VLQMLKAVLSELIPLIKYLNLKIFDPRISQFFSNLVKTNLSY-----REKNNIKRDDFLN 268
+ +L + E IP +KYL ++ P S F+ + Y ++ D ++
Sbjct: 153 IFMLLAGLPEEDIPHLKYLTDQMTRPDGSMTFAEAKEALYDYLIPIIEQRRQKPGTDAIS 212
Query: 269 IMMQLQIAQRGKTLSPDDVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQS 328
I+ Q+ R +T D + GG +T + L+F + LA++P+ +
Sbjct: 213 IVANGQVNGR---------PITSDEAKRMCGLLLVGGLDTVVNFLSFSMEFLAKSPEHRQ 263
Query: 329 KLRQ 332
+L Q
Sbjct: 264 ELIQ 267
>pdb|4AKL|A Chain A, Structure Of The Crimean-Congo Haemorrhagic Fever Virus
Nucleocapsid Protein
pdb|4AKL|B Chain B, Structure Of The Crimean-Congo Haemorrhagic Fever Virus
Nucleocapsid Protein
Length = 482
Score = 29.6 bits (65), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 37/70 (52%), Gaps = 5/70 (7%)
Query: 307 ETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSYLDKVTKEALRMY 366
ET +V F L+EL ++P K+++ +++T K G+ YE+ D + + M+
Sbjct: 322 ETFPTVSQF-LFELGKHPRGTKKMKKALLSTPMKWGKKLYELFAD----DSFQQNRIYMH 376
Query: 367 PSLPQLDRIS 376
P++ RIS
Sbjct: 377 PAVLTAGRIS 386
>pdb|4AQF|A Chain A, X-Ray Crystallographic Structure Of Crimean-Congo
Haemorrhagic Fever Virus Nucleoprotein
pdb|4AQF|B Chain B, X-Ray Crystallographic Structure Of Crimean-Congo
Haemorrhagic Fever Virus Nucleoprotein
Length = 483
Score = 28.9 bits (63), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 36/70 (51%), Gaps = 5/70 (7%)
Query: 307 ETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSYLDKVTKEALRMY 366
ET +V F L+EL + P K+++ +++T K G+ YE+ D + + M+
Sbjct: 323 ETFPTVSQF-LFELGKQPRGTKKMKKALLSTPMKWGKKLYELFAD----DSFQQNRIYMH 377
Query: 367 PSLPQLDRIS 376
P++ RIS
Sbjct: 378 PAVLTAGRIS 387
>pdb|2ODH|A Chain A, Restriction Endonuclease Bcni In The Absence Of Dna
pdb|2Q10|A Chain A, Restriction Endonuclease Bcni (Wild Type)-Cognate Dna
Substrate Complex
pdb|2Q10|B Chain B, Restriction Endonuclease Bcni (Wild Type)-Cognate Dna
Substrate Complex
pdb|3IMB|A Chain A, Alternative Binding Mode Of Restriction Endonuclease Bcni
To Cognate Dna
pdb|3IMB|B Chain B, Alternative Binding Mode Of Restriction Endonuclease Bcni
To Cognate Dna
pdb|3IMB|C Chain C, Alternative Binding Mode Of Restriction Endonuclease Bcni
To Cognate Dna
pdb|3IMB|D Chain D, Alternative Binding Mode Of Restriction Endonuclease Bcni
To Cognate Dna
Length = 238
Score = 28.9 bits (63), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 30/135 (22%), Positives = 55/135 (40%), Gaps = 7/135 (5%)
Query: 274 QIAQRGKTLSPDDVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQE 333
+I +G P D+ TDD + Q FG E + ++ +EL + ++K
Sbjct: 15 EIKNKGYLSVPTDMFRTDDGVVGQILERQFGVQENNITLGDLGEFELKGMRNRKAKSNLT 74
Query: 334 IMATKKKEGELTYEICHKMSYLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLTLDVGT 393
+ K G+ +I ++ Y+ ++ M L ++K +L N LTL+
Sbjct: 75 LFHKKPVAGQTVIQIFNRFGYVKPSSRNPEVMKKKL----FTTIKGGRLNNLGLTLNAKH 130
Query: 394 KISIPTFAIHYDPEY 408
I ++Y EY
Sbjct: 131 ASEI---NLYYQDEY 142
>pdb|4AQF|C Chain C, X-Ray Crystallographic Structure Of Crimean-Congo
Haemorrhagic Fever Virus Nucleoprotein
pdb|4AQG|A Chain A, X-Ray Crystallographic Structure Of Crimean-Congo
Haemorrhagic Fever Virus Nucleoprotein
Length = 483
Score = 28.9 bits (63), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 36/70 (51%), Gaps = 5/70 (7%)
Query: 307 ETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSYLDKVTKEALRMY 366
ET +V F L+EL + P K+++ +++T K G+ YE+ D + + M+
Sbjct: 323 ETFPTVSQF-LFELGKQPRGTKKMKKALLSTPMKWGKKLYELFAD----DSFQQNRIYMH 377
Query: 367 PSLPQLDRIS 376
P++ RIS
Sbjct: 378 PAVLTAGRIS 387
>pdb|3A4Z|A Chain A, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A4Z|B Chain B, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A4Z|C Chain C, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A4Z|D Chain D, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A4Z|E Chain E, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A50|A Chain A, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A50|B Chain B, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A50|C Chain C, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A50|D Chain D, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A50|E Chain E, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A51|A Chain A, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
pdb|3A51|B Chain B, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
pdb|3A51|C Chain C, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
pdb|3A51|D Chain D, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
pdb|3A51|E Chain E, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
Length = 411
Score = 28.9 bits (63), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 31/164 (18%), Positives = 63/164 (38%), Gaps = 28/164 (17%)
Query: 285 DDVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGEL 344
D ++ + + A + + G+ET+ +++ + L +PD Q KL
Sbjct: 217 DGDRLSQEELVAMAMLLLIAGHETTVNLIGNGVLALLTHPD-QRKL-------------- 261
Query: 345 TYEICHKMSYLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKISIPTFAIHY 404
+ S + +E LR + Q I + + +T+ G + + A +
Sbjct: 262 ---LAEDPSLISSAVEEFLRFDSPVSQAP-IRFTAEDVTYSGVTIPAGEMVMLGLAAANR 317
Query: 405 DPEYYPDPEKFDPERFSPENIESRPHYTYLPFGDGPRNCIGKIL 448
D ++ P+P++ D R + + FG G C+G L
Sbjct: 318 DADWMPEPDRLDITRDASGGVF---------FGHGIHFCLGAQL 352
>pdb|3A4G|A Chain A, Structure Of Cytochrome P450 Vdh From Pseudonocardia
Autotrophica (Trigonal Crystal Form)
pdb|3A4H|A Chain A, Structure Of Cytochrome P450 Vdh From Pseudonocardia
Autotrophica (Orthorhombic Crystal Form)
Length = 411
Score = 28.9 bits (63), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 31/164 (18%), Positives = 63/164 (38%), Gaps = 28/164 (17%)
Query: 285 DDVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGEL 344
D ++ + + A + + G+ET+ +++ + L +PD Q KL
Sbjct: 217 DGDRLSQEELVAMAMLLLIAGHETTVNLIGNGVLALLTHPD-QRKL-------------- 261
Query: 345 TYEICHKMSYLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKISIPTFAIHY 404
+ S + +E LR + Q I + + +T+ G + + A +
Sbjct: 262 ---LAEDPSLISSAVEEFLRFDSPVSQAP-IRFTAEDVTYSGVTIPAGEMVMLGLAAANR 317
Query: 405 DPEYYPDPEKFDPERFSPENIESRPHYTYLPFGDGPRNCIGKIL 448
D ++ P+P++ D R + + FG G C+G L
Sbjct: 318 DADWMPEPDRLDITRDASGGVF---------FGHGIHFCLGAQL 352
>pdb|3U3I|A Chain A, A Rna Binding Protein From Crimean-Congo Hemorrhagic Fever
Virus
Length = 482
Score = 28.5 bits (62), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 36/70 (51%), Gaps = 5/70 (7%)
Query: 307 ETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSYLDKVTKEALRMY 366
ET +V F L+EL + P K+++ +++T K G+ YE+ D + + M+
Sbjct: 322 ETFPTVSQF-LFELGKQPRGTKKMKKALLSTPLKWGKKLYELFAD----DSFQQNRIYMH 376
Query: 367 PSLPQLDRIS 376
P++ RIS
Sbjct: 377 PAVLTAGRIS 386
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.138 0.396
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,108,119
Number of Sequences: 62578
Number of extensions: 548420
Number of successful extensions: 1667
Number of sequences better than 100.0: 207
Number of HSP's better than 100.0 without gapping: 111
Number of HSP's successfully gapped in prelim test: 96
Number of HSP's that attempted gapping in prelim test: 1319
Number of HSP's gapped (non-prelim): 222
length of query: 448
length of database: 14,973,337
effective HSP length: 102
effective length of query: 346
effective length of database: 8,590,381
effective search space: 2972271826
effective search space used: 2972271826
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 53 (25.0 bits)