RPS-BLAST 2.2.26 [Sep-21-2011]
Database: CDD.v3.10
44,354 sequences; 10,937,602 total letters
Searching..................................................done
Query= psy2447
(448 letters)
>gnl|CDD|215689 pfam00067, p450, Cytochrome P450. Cytochrome P450s are
haem-thiolate proteins involved in the oxidative
degradation of various compounds. They are particularly
well known for their role in the degradation of
environmental toxins and mutagens. They can be divided
into 4 classes, according to the method by which
electrons from NAD(P)H are delivered to the catalytic
site. Sequence conservation is relatively low within the
family - there are only 3 absolutely conserved residues
- but their general topography and structural fold are
highly conserved. The conserved core is composed of a
coil termed the 'meander', a four-helix bundle, helices
J and K, and two sets of beta-sheets. These constitute
the haem-binding loop (with an absolutely conserved
cysteine that serves as the 5th ligand for the haem
iron), the proton-transfer groove and the absolutely
conserved EXXR motif in helix K. While prokaryotic P450s
are soluble proteins, most eukaryotic P450s are
associated with microsomal membranes. their general
enzymatic function is to catalyze regiospecific and
stereospecific oxidation of non-activated hydrocarbons
at physiological temperatures.
Length = 461
Score = 282 bits (724), Expect = 8e-91
Identities = 117/390 (30%), Positives = 188/390 (48%), Gaps = 29/390 (7%)
Query: 72 MMTPKLMVTDPELYKYILIKDFDHFVDRGM--GELDAKRDPIAGHLFLSKGEYWKRLRNK 129
P ++++ PE K +LIK + F R ++ + + + G W++LR
Sbjct: 42 GPKPVVVLSGPEAVKEVLIKKGEEFSGRPDEPWFATSRGPFLGKGIVFANGPRWRQLRRF 101
Query: 130 LSPTFTSGKIKYMFPLIKKCSDQLITTIRKQIGESKQMSLEVKDYCARYTTDVIGTTAFG 189
L+PTFTS P +++ + L+ +RK GE +++ D R +VI + FG
Sbjct: 102 LTPTFTSFGKLSFEPRVEEEARDLVEKLRKTAGEPG--VIDITDLLFRAALNVICSILFG 159
Query: 190 IEINSLENPDS----EFRQVSLLVMKPSVLQMLKAVLSELIPLIKYLNLKIFD------P 239
SLE+P + Q ++ Q+L L P++KY
Sbjct: 160 ERFGSLEDPKFLELVKAVQELSSLLSSPSPQLLD-----LFPILKYFPGPHGRKLKRARK 214
Query: 240 RISQFFSNLVKTNLSYREKNNIKRDDFLNIMMQLQIAQRGKTLSPDDVEMTDDVITAQSF 299
+I L++ + DFL+ ++ D ++TD+ + A
Sbjct: 215 KIKDLLDKLIEERRETLDSAKKSPRDFLDALLL-------AKEEEDGSKLTDEELRATVL 267
Query: 300 VFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSYLDKVT 359
FF G +T+SS L++ LYELA++P++Q KLR+EI + TY+ M YLD V
Sbjct: 268 ELFFAGTDTTSSTLSWALYELAKHPEVQEKLREEIDEVIGDKRSPTYDDLQNMPYLDAVI 327
Query: 360 KEALRMYPSLP-QLDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPEYYPDPEKFDPE 418
KE LR++P +P L R K +P + GT + + +A+H DPE +P+PE+FDPE
Sbjct: 328 KETLRLHPVVPLLLPREVTKDTVIP--GYLIPKGTLVIVNLYALHRDPEVFPNPEEFDPE 385
Query: 419 RFSPENIESRPHYTYLPFGDGPRNCIGKIL 448
RF EN + R + +LPFG GPRNC+G+ L
Sbjct: 386 RFLDENGKFRKSFAFLPFGAGPRNCLGERL 415
Score = 35.7 bits (83), Expect = 0.050
Identities = 24/86 (27%), Positives = 35/86 (40%), Gaps = 17/86 (19%)
Query: 2 SLEVKDYCARYTTDVIGSTAFGIEINSLENPDSE-----FRQVSLLFMKPSVLQMMKAVL 56
+++ D R +VI S FG SLE+P +++S L PS L
Sbjct: 138 VIDITDLLFRAALNVICSILFGERFGSLEDPKFLELVKAVQELSSLLSSPSPQ------L 191
Query: 57 SELIPVIKYLN------LKEAMMTPK 76
+L P++KY LK A K
Sbjct: 192 LDLFPILKYFPGPHGRKLKRARKKIK 217
>gnl|CDD|225035 COG2124, CypX, Cytochrome P450 [Secondary metabolites biosynthesis,
transport, and catabolism].
Length = 411
Score = 156 bits (396), Expect = 3e-43
Identities = 91/376 (24%), Positives = 153/376 (40%), Gaps = 74/376 (19%)
Query: 78 MVTDPELYKYILIKDFDHFVDRGMGELDAKRD-PIAGH--LFLSKGEYWKRLRNKLSPTF 134
+V+ P + +L +D F L + P+ G L G RLR L+P F
Sbjct: 52 VVSRPADVREVL-RDPRFFSSALGAGLRPRLLRPVLGDGSLLTLDGPEHTRLRKLLAPAF 110
Query: 135 TSGKIKYMFPLIKKCSDQLITTIRKQIGESKQMSLEVKDYCARYTTDVIGTTAFGIEINS 194
T ++ PLI++ +D+L+ + + + V D+ A T VI G+
Sbjct: 111 TPRALRGYRPLIREIADRLLDDLWQGGAD------LVLDFAAELTLRVIAE-LLGV---- 159
Query: 195 LENPDSEFRQVSLLVMKPSVLQMLKAVLSELIPLIKYLNLKIFDPRISQFFSNLVKTNLS 254
P + Q + +L + +L P + + + + L+
Sbjct: 160 ---PLEDRPQ-----LLRWSDALLLRLDPDLGPEEPWRRARAARRELDAYLRALIA---- 207
Query: 255 YREKNNIKRDDFLNIMMQLQIAQRGKTLSPDDVEMTDDVITAQSFVFFFGGYETSSSVLT 314
E+ RDD L++++ + ++DD I + G+ET+++ L
Sbjct: 208 --ERRAAPRDDLLSLLLSAED--------DGGGRLSDDEIRDELITLLVAGHETTANALA 257
Query: 315 FCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSYLDKVTKEALRMYPSLPQLDR 374
+ LY L R+PD +KLR E L+ V +E LR+YP +P R
Sbjct: 258 WALYALLRHPDQLAKLRAEPDRP----------------LLEAVVEETLRLYPPVPLARR 301
Query: 375 ISVKKYKLPNTDLTLDV-----GTKISIPTFAIHYDPEYYPDPEKFDPERFSPENIESRP 429
+ + D+ L GT + + A + DPE +PDP++FDPERF
Sbjct: 302 V-ATE------DVELGGYRIPAGTVVLLSIGAANRDPEVFPDPDEFDPERF--------- 345
Query: 430 HYTYLPFGDGPRNCIG 445
+ +LPFG GP C+G
Sbjct: 346 NNAHLPFGGGPHRCLG 361
>gnl|CDD|215164 PLN02290, PLN02290, cytokinin trans-hydroxylase.
Length = 516
Score = 138 bits (349), Expect = 7e-36
Identities = 104/386 (26%), Positives = 181/386 (46%), Gaps = 39/386 (10%)
Query: 75 PKLMVTDPELYKYILIKDFDHFVDRGMGELDAKRDPIAGHLFLSKGEYWKRLRNKLSPTF 134
P+L +T+ EL K +L K ++ + + + I L ++ G W R+ +P F
Sbjct: 105 PRLCLTETELIKELLTK-YNTVTGKSWLQQQGTKHFIGRGLLMANGADWYHQRHIAAPAF 163
Query: 135 TSGKIKYMFPLIKKCSDQLITTIRKQIGESKQMSLEVKDYCARYTTDVIGTTAFGIEINS 194
++K + +C+ Q++ +++K + ES Q +E+ +Y R T D+I T F
Sbjct: 164 MGDRLKGYAGHMVECTKQMLQSLQKAV-ESGQTEVEIGEYMTRLTADIISRTEF------ 216
Query: 195 LENPDSEFRQVSLLVMKPSVLQMLKAVLSE--LIPLIKYL------NLKIFDPRISQFFS 246
DS + + + +VLQ L A + P ++ +K + +
Sbjct: 217 ----DSSYEKGKQIFHLLTVLQRLCAQATRHLCFPGSRFFPSKYNREIKSLKGEVERLLM 272
Query: 247 NLVKTNLSYREKNNIKR-----DDFLNIMMQLQIAQRGKTLSPDDVEMTDDVITAQSFVF 301
+++ S R+ I R DD L +++ +R + + + D+ T F
Sbjct: 273 EIIQ---SRRDCVEIGRSSSYGDDLLGMLLNEMEKKRSNGFNLNLQLIMDECKT-----F 324
Query: 302 FFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSYLDKVTKE 361
FF G+ET++ +LT+ L LA NP Q K+R E+ E + + K++ L+ V E
Sbjct: 325 FFAGHETTALLLTWTLMLLASNPTWQDKVRAEVAEVCGGETP-SVDHLSKLTLLNMVINE 383
Query: 362 ALRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPEYY-PDPEKFDPERF 420
+LR+YP L R++ + KL DL + G I IP AIH+ E + D +F+P+RF
Sbjct: 384 SLRLYPPATLLPRMAFEDIKL--GDLHIPKGLSIWIPVLAIHHSEELWGKDANEFNPDRF 441
Query: 421 SPENIESRPHYTYLPFGDGPRNCIGK 446
+ H ++PF GPRNCIG+
Sbjct: 442 AGRPFAPGRH--FIPFAAGPRNCIGQ 465
>gnl|CDD|215393 PLN02738, PLN02738, carotene beta-ring hydroxylase.
Length = 633
Score = 123 bits (311), Expect = 2e-30
Identities = 106/395 (26%), Positives = 187/395 (47%), Gaps = 49/395 (12%)
Query: 75 PK--LMVTDPELYKYILIKDFDHFVDRGMGELDAKRDPIAGH-LFLSKGEYWKRLRNKLS 131
PK L+V+DP + K+IL +D +G+ L + + G L + GE W+ R +
Sbjct: 174 PKSFLIVSDPSIAKHIL-RDNSKAYSKGI--LAEILEFVMGKGLIPADGEIWRVRRRAIV 230
Query: 132 PTFTSGKIKYMFPLIKKCSDQLITTIRKQIGESKQMSLEVKDYCARYTTDVIGTTAFGIE 191
P + M L + SD+L + S +E++ +R T D+IG F +
Sbjct: 231 PALHQKYVAAMISLFGQASDRLCQKLDA--AASDGEDVEMESLFSRLTLDIIGKAVFNYD 288
Query: 192 INSLENPDSEFRQVSLLVMKPSVLQMLKAVLSELIPLIKYLNLKIFDPR----------I 241
+SL N D+ + V++ + + + + IP+ K PR I
Sbjct: 289 FDSLSN-DTGIVEAVYTVLREAEDRSVSPIPVWEIPI-----WKDISPRQRKVAEALKLI 342
Query: 242 SQFFSNLVKTNLSYREKNNIK-RDDFLN----IMMQLQIAQRGKTLSPDDV---EMTDDV 293
+ +L+ E+ ++ ++++N ++ +A S DDV ++ DD+
Sbjct: 343 NDTLDDLIAICKRMVEEEELQFHEEYMNERDPSILHFLLA------SGDDVSSKQLRDDL 396
Query: 294 ITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMS 353
+T G+ETS++VLT+ Y L++ P + +KL++E+ + + T E K+
Sbjct: 397 MT-----MLIAGHETSAAVLTWTFYLLSKEPSVVAKLQEEV-DSVLGDRFPTIEDMKKLK 450
Query: 354 YLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPEYYPDPE 413
Y +V E+LR+YP P L R S++ L + G I I + +H P+++ D E
Sbjct: 451 YTTRVINESLRLYPQPPVLIRRSLENDML--GGYPIKRGEDIFISVWNLHRSPKHWDDAE 508
Query: 414 KFDPERF---SPENIESRPHYTYLPFGDGPRNCIG 445
KF+PER+ P E+ +++YLPFG GPR C+G
Sbjct: 509 KFNPERWPLDGPNPNETNQNFSYLPFGGGPRKCVG 543
>gnl|CDD|178524 PLN02936, PLN02936, epsilon-ring hydroxylase.
Length = 489
Score = 114 bits (288), Expect = 9e-28
Identities = 103/402 (25%), Positives = 185/402 (46%), Gaps = 66/402 (16%)
Query: 77 LMVTDPELYKYILIKDFDHFVDRGMGELDAKR--DPIAGHLF-----LSKGEYWKRLRNK 129
++V+DP + K++L R G AK ++ LF +++GE W R
Sbjct: 63 VVVSDPAIAKHVL---------RNYGSKYAKGLVAEVSEFLFGSGFAIAEGELWTARRRA 113
Query: 130 LSPT----FTSGKIKYMFPLIKKCSDQLITTIRKQIGESKQMSLEVKDYCARYTTDVIGT 185
+ P+ + S + +F KC+++L+ + + +++E K ++ T DVIG
Sbjct: 114 VVPSLHRRYLSVMVDRVF---CKCAERLVEKLEPVALSGEAVNMEAK--FSQLTLDVIGL 168
Query: 186 TAFGIEINSLENPDSEFRQVSLLVMKPSVLQMLKAVLSELIPLIKYLNLKIFDPR----- 240
+ F +SL DS Q +K + + ++L+P K L PR
Sbjct: 169 SVFNYNFDSLTT-DSPVIQAVYTALKEAETRS-----TDLLPYWKVDFLCKISPRQIKAE 222
Query: 241 -----ISQFFSNLVK--TNLSYREKNNIKRDDFLN----IMMQLQIAQRGKTLSPDDVEM 289
I + +LV + E I+ ++++N +++ +A R + S V++
Sbjct: 223 KAVTVIRETVEDLVDKCKEIVEAEGEVIEGEEYVNDSDPSVLRFLLASREEVSS---VQL 279
Query: 290 TDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQE---IMATKKKEGELTY 346
DD+++ G+ET+ SVLT+ LY L++NP+ K ++E ++ + TY
Sbjct: 280 RDDLLS-----MLVAGHETTGSVLTWTLYLLSKNPEALRKAQEELDRVLQGRPP----TY 330
Query: 347 EICHKMSYLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDP 406
E ++ YL + E++R+YP P L R + + LP ++ G I I + IH P
Sbjct: 331 EDIKELKYLTRCINESMRLYPHPPVLIRRAQVEDVLPG-GYKVNAGQDIMISVYNIHRSP 389
Query: 407 EYYPDPEKFDPERFSPENI---ESRPHYTYLPFGDGPRNCIG 445
E + E+F PERF + E+ + Y+PF GPR C+G
Sbjct: 390 EVWERAEEFVPERFDLDGPVPNETNTDFRYIPFSGGPRKCVG 431
>gnl|CDD|173595 PTZ00404, PTZ00404, cytochrome P450; Provisional.
Length = 482
Score = 112 bits (283), Expect = 5e-27
Identities = 96/388 (24%), Positives = 162/388 (41%), Gaps = 54/388 (13%)
Query: 79 VTDPELYKYILIKDFDHFVDRGMG---ELDAKRDPIAGHLFLSKGEYWKRLRNKLSPTFT 135
++DP L + + + +FD+F DR + I S GEYWKR R +
Sbjct: 77 LSDPILIREMFVDNFDNFSDRPKIPSIKHGTFYHGIVT----SSGEYWKRNREIVGKAMR 132
Query: 136 SGKIKYMFPLIKKCSDQLITTIRKQIGESKQMSLEVKDYCARYTTDVIGTTAFGIEINSL 195
+K+++ L+ D LI +++K ES + E + Y ++T + F +I+
Sbjct: 133 KTNLKHIYDLLDDQVDVLIESMKKI--ESSGETFEPRYYLTKFTMSAMFKYIFNEDIS-- 188
Query: 196 ENPDSEFRQVSLL------VMKPSVLQMLKAVLSELIPLIKYLNLKIFD---PRISQFFS 246
+ D +++ L V K L V+ PL Y L+ D +I +F
Sbjct: 189 FDEDIHNGKLAELMGPMEQVFKDLGSGSLFDVIEITQPLY-YQYLEHTDKNFKKIKKFIK 247
Query: 247 NLVKTNLSYREKNNIKRDDFLNIMMQLQIAQRGKTLSPDDVEMTDDVITAQSFVFFFGGY 306
Y E + ++ L I + G T + DD+ I A FF G
Sbjct: 248 E------KYHEHLKTIDPEVPRDLLDLLIKEYG-TNTDDDIL----SILATILDFFLAGV 296
Query: 307 ETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSYLDKVTKEALRMY 366
+TS++ L + + L P+IQ K EI +T ++ Y + KE LR
Sbjct: 297 DTSATSLEWMVLMLCNYPEIQEKAYNEIKSTVNGRNKVLLSDRQSTPYTVAIIKETLRYK 356
Query: 367 PSLPQLDRISVKKYKLPNT---DLTLDVG------TKISIPTFAIHYDPEYYPDPEKFDP 417
P P + LP + D+ + G +I I +++ + +Y+ +PE+FDP
Sbjct: 357 PVSP---------FGLPRSTSNDIIIGGGHFIPKDAQILINYYSLGRNEKYFENPEQFDP 407
Query: 418 ERFSPENIESRPHYTYLPFGDGPRNCIG 445
RF + + ++PF GPRNC+G
Sbjct: 408 SRF----LNPDSNDAFMPFSIGPRNCVG 431
>gnl|CDD|177847 PLN02196, PLN02196, abscisic acid 8'-hydroxylase.
Length = 463
Score = 94.6 bits (235), Expect = 6e-21
Identities = 98/387 (25%), Positives = 160/387 (41%), Gaps = 63/387 (16%)
Query: 75 PKLMVTDPELYKYILIKDFDHFVDRGMGELDAKRDPIAGH--LFLSKGEYWKRLRNKLSP 132
P +M++ PE K++L+ F A ++ + G +F +G+Y +LR +
Sbjct: 80 PCVMISSPEAAKFVLVTKSHLF----KPTFPASKERMLGKQAIFFHQGDYHAKLRKLVLR 135
Query: 133 TFTSGKIKYMFPLIKKCSDQLITTIRKQIGESKQMSLEVKDYCARYTTDVIGTTAFGIEI 192
F I+ M P I+ + + ++ G E+K Y F + +
Sbjct: 136 AFMPDAIRNMVPDIESIAQE---SLNSWEGTQINTYQEMKTY------------TFNVAL 180
Query: 193 NSLENPDSEFRQVSLLVMKPSVLQMLKAVLSELIPLIKYLNLKIFDPR--ISQFFSNLVK 250
S+ D + L K + K S I L L K R ++Q + +
Sbjct: 181 LSIFGKDEVLYREDL---KRCYYILEKGYNSMPINLPGTLFHKSMKARKELAQILAKI-- 235
Query: 251 TNLSYREKNNIKRDDFLNIMMQLQIAQRGKTLSPDDVEMTDDVITAQSFVFFFGGYETSS 310
LS R +N +D L M D +TD+ I F +T++
Sbjct: 236 --LSKRRQNGSSHNDLLGSFMG------------DKEGLTDEQIADNIIGVIFAARDTTA 281
Query: 311 SVLTFCLYELARNPDIQSKLRQE---IMATKKKEGELTYEICHKMSYLDKVTKEALRMYP 367
SVLT+ L LA NP + + +E I K++ LT+E KM +V +E LR+
Sbjct: 282 SVLTWILKYLAENPSVLEAVTEEQMAIRKDKEEGESLTWEDTKKMPLTSRVIQETLRVAS 341
Query: 368 SLPQLDRISVKK-----YKLPNTDLTLDVGTKISIPTFA-IHYDPEYYPDPEKFDPERFS 421
L R +V+ Y +P G K+ +P F IH+ + + DP KFDP RF
Sbjct: 342 ILSFTFREAVEDVEYEGYLIPK-------GWKV-LPLFRNIHHSADIFSDPGKFDPSRFE 393
Query: 422 PENIESRPHYTYLPFGDGPRNCIGKIL 448
+ +P+ T++PFG+G +C G L
Sbjct: 394 ---VAPKPN-TFMPFGNGTHSCPGNEL 416
>gnl|CDD|215371 PLN02687, PLN02687, flavonoid 3'-monooxygenase.
Length = 517
Score = 91.0 bits (226), Expect = 1e-19
Identities = 66/265 (24%), Positives = 128/265 (48%), Gaps = 36/265 (13%)
Query: 201 EFRQVSLLVMKPSVLQMLKAVLS--ELIPLIKYLNL-------KIFDPRISQFFSNLVKT 251
EF+++ + +M+ L V + + +P +++L+L K R + +++
Sbjct: 205 EFKEMVVELMQ------LAGVFNVGDFVPALRWLDLQGVVGKMKRLHRRFDAMMNGIIEE 258
Query: 252 NLSYREKNNIKRDDFLNIMMQLQIAQRGKTLSPDDVEMTDDVITAQSFVFFFGGYETSSS 311
+ + + + + D L+ ++ L+ R + + +TD I A F G +T+SS
Sbjct: 259 HKAAGQTGSEEHKDLLSTLLALK---REQQADGEGGRITDTEIKALLLNLFTAGTDTTSS 315
Query: 312 VLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSYLDKVTKEALRMYPSLP- 370
+ + + EL R+PDI K ++E+ A ++ ++ +++YL V KE R++PS P
Sbjct: 316 TVEWAIAELIRHPDILKKAQEELDAVVGRDRLVSESDLPQLTYLQAVIKETFRLHPSTPL 375
Query: 371 QLDRIS-----VKKYKLPNTDLTLDVGTKISIPTFAIHYDPEYYPDPEKFDPERFSP--- 422
L R++ + Y +P G + + +AI DPE +PDP +F P+RF P
Sbjct: 376 SLPRMAAEECEINGYHIPK-------GATLLVNVWAIARDPEQWPDPLEFRPDRFLPGGE 428
Query: 423 -ENIESR-PHYTYLPFGDGPRNCIG 445
++ + + +PFG G R C G
Sbjct: 429 HAGVDVKGSDFELIPFGAGRRICAG 453
>gnl|CDD|165828 PLN02183, PLN02183, ferulate 5-hydroxylase.
Length = 516
Score = 89.1 bits (221), Expect = 4e-19
Identities = 56/247 (22%), Positives = 111/247 (44%), Gaps = 30/247 (12%)
Query: 222 LSELIPLIKYLNLKIFDPRISQ-------FFSNLVKTNLSYREKNNIKRD------DFLN 268
+++ IP + +++ + + R+ + F +++ ++ R+ N D D ++
Sbjct: 217 VADFIPWLGWIDPQGLNKRLVKARKSLDGFIDDIIDDHIQKRKNQNADNDSEEAETDMVD 276
Query: 269 IMMQLQIAQRGKTLSPD---DVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPD 325
++ + S D +++T D I A FGG ET +S + + + EL ++P+
Sbjct: 277 DLLAFYSEEAKVNESDDLQNSIKLTRDNIKAIIMDVMFGGTETVASAIEWAMAELMKSPE 336
Query: 326 IQSKLRQEIMATKKKEGELTYEICHKMSYLDKVTKEALRMYPSLPQL-----DRISVKKY 380
+++QE+ + K++YL KE LR++P +P L + V Y
Sbjct: 337 DLKRVQQELADVVGLNRRVEESDLEKLTYLKCTLKETLRLHPPIPLLLHETAEDAEVAGY 396
Query: 381 KLPNTDLTLDVGTKISIPTFAIHYDPEYYPDPEKFDPERFSPENIES--RPHYTYLPFGD 438
+P +++ I +AI D + DP+ F P RF + H+ ++PFG
Sbjct: 397 FIPKR-------SRVMINAWAIGRDKNSWEDPDTFKPSRFLKPGVPDFKGSHFEFIPFGS 449
Query: 439 GPRNCIG 445
G R+C G
Sbjct: 450 GRRSCPG 456
>gnl|CDD|215171 PLN02302, PLN02302, ent-kaurenoic acid oxidase.
Length = 490
Score = 88.2 bits (219), Expect = 8e-19
Identities = 59/201 (29%), Positives = 99/201 (49%), Gaps = 29/201 (14%)
Query: 256 REKNNI--KRDDFLNIMMQLQIAQRGKTLSPDDVEMTDDVITAQSFVFFFGGYETSSSVL 313
K NI ++ D L++++ + + G+ L DD E+ D ++ ++ G+E+S +
Sbjct: 256 SRKQNISPRKKDMLDLLLDAE-DENGRKL--DDEEIIDLLL-----MYLNAGHESSGHLT 307
Query: 314 TFCLYELARNPDIQSKLR--QEIMATKKKEGE--LTYEICHKMSYLDKVTKEALRMYPSL 369
+ L +P++ K + QE +A K+ G+ LT + KM YL +V E LR+
Sbjct: 308 MWATIFLQEHPEVLQKAKAEQEEIAKKRPPGQKGLTLKDVRKMEYLSQVIDETLRLINIS 367
Query: 370 PQLDR-----ISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPEYYPDPEKFDPERFSPEN 424
+ R + V Y +P G K+ +H DPE YP+P++FDP R+ +N
Sbjct: 368 LTVFREAKTDVEVNGYTIPK-------GWKVLAWFRQVHMDPEVYPNPKEFDPSRW--DN 418
Query: 425 IESRPHYTYLPFGDGPRNCIG 445
+ T+LPFG G R C G
Sbjct: 419 YTPKAG-TFLPFGLGSRLCPG 438
>gnl|CDD|177725 PLN00110, PLN00110, flavonoid 3',5'-hydroxylase (F3'5'H);
Provisional.
Length = 504
Score = 86.1 bits (213), Expect = 4e-18
Identities = 62/191 (32%), Positives = 96/191 (50%), Gaps = 24/191 (12%)
Query: 265 DFLNIMMQLQIAQRGKTLSPDDVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNP 324
DFL+++M Q G+ L+ +T+ I A F G +TSSSV+ + L E+ +NP
Sbjct: 268 DFLDVVMANQENSTGEKLT-----LTN--IKALLLNLFTAGTDTSSSVIEWSLAEMLKNP 320
Query: 325 DIQSKLRQEIMATKKKEGELTYEICHKMSYLDKVTKEALRMYPSLP-QLDRIS-----VK 378
I + +E+ + L K+ YL + KE+ R +PS P L R+S V
Sbjct: 321 SILKRAHEEMDQVIGRNRRLVESDLPKLPYLQAICKESFRKHPSTPLNLPRVSTQACEVN 380
Query: 379 KYKLPNTDLTLDVGTKISIPTFAIHYDPEYYPDPEKFDPERFSPE---NIESRPH-YTYL 434
Y +P T++S+ +AI DP+ + +PE+F PERF E I+ R + + +
Sbjct: 381 GYYIPK-------NTRLSVNIWAIGRDPDVWENPEEFRPERFLSEKNAKIDPRGNDFELI 433
Query: 435 PFGDGPRNCIG 445
PFG G R C G
Sbjct: 434 PFGAGRRICAG 444
>gnl|CDD|215354 PLN02655, PLN02655, ent-kaurene oxidase.
Length = 466
Score = 85.6 bits (212), Expect = 6e-18
Identities = 65/251 (25%), Positives = 111/251 (44%), Gaps = 42/251 (16%)
Query: 214 VLQMLKAVLS----ELIPLIKYLNLKIFDPRISQ--FFSNLVKTNLSYREKNNI----KR 263
V M+ + + P + ++ K F+ R+ F V L ++K I +R
Sbjct: 185 VHDMMMCAIEVDWRDFFPYLSWIPNKSFETRVQTTEFRRTAVMKALIKQQKKRIARGEER 244
Query: 264 DDFLNIMMQLQIAQRGKTLSPDDVEMTDDVITAQSFVFFFGGYETSSSVLT---FCLYEL 320
D +L+ ++ L+ + + M + + + E + + L + +YEL
Sbjct: 245 DCYLDFLLS-----EATHLTDEQLMM----LVWEPII------EAADTTLVTTEWAMYEL 289
Query: 321 ARNPDIQSKLRQEIMATKKKEGELTYEICHKMSYLDKVTKEALRMYPSLPQL------DR 374
A+NPD Q +L +EI E +T E + YL+ V E LR Y +P L +
Sbjct: 290 AKNPDKQERLYREIREVCGDE-RVTEEDLPNLPYLNAVFHETLRKYSPVPLLPPRFVHED 348
Query: 375 ISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPEYYPDPEKFDPERFSPENIESRPHYTYL 434
++ Y +P GT+I+I + + D + + +PE++DPERF E ES Y +
Sbjct: 349 TTLGGYDIP-------AGTQIAINIYGCNMDKKRWENPEEWDPERFLGEKYESADMYKTM 401
Query: 435 PFGDGPRNCIG 445
FG G R C G
Sbjct: 402 AFGAGKRVCAG 412
>gnl|CDD|215221 PLN02394, PLN02394, trans-cinnamate 4-monooxygenase.
Length = 503
Score = 80.9 bits (200), Expect = 2e-16
Identities = 46/134 (34%), Positives = 74/134 (55%), Gaps = 6/134 (4%)
Query: 319 ELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSYLDKVTKEALRMYPSLPQL-DRISV 377
EL +P+IQ KLR E+ ++T HK+ YL V KE LR++ ++P L +++
Sbjct: 319 ELVNHPEIQKKLRDELDTVLGPGNQVTEPDTHKLPYLQAVVKETLRLHMAIPLLVPHMNL 378
Query: 378 KKYKLPNTDLTLDVGTKISIPTFAIHYDPEYYPDPEKFDPERFSPENIESRPH---YTYL 434
+ KL D+ +KI + + + +PE + +PE+F PERF E + + + +L
Sbjct: 379 EDAKLGGYDIP--AESKILVNAWWLANNPELWKNPEEFRPERFLEEEAKVEANGNDFRFL 436
Query: 435 PFGDGPRNCIGKIL 448
PFG G R+C G IL
Sbjct: 437 PFGVGRRSCPGIIL 450
>gnl|CDD|177826 PLN02169, PLN02169, fatty acid (omega-1)-hydroxylase/midchain
alkane hydroxylase.
Length = 500
Score = 80.8 bits (199), Expect = 2e-16
Identities = 63/206 (30%), Positives = 96/206 (46%), Gaps = 22/206 (10%)
Query: 253 LSYREKNNIKR-------DDFLNIMMQLQIAQRGKTLSPDDVEMTDDVITAQSFVFFFGG 305
+S R K I R D L M + ++ K L P + DVI F G
Sbjct: 259 ISSRRKEEISRAETEPYSKDALTYYMNVDTSKY-KLLKPKKDKFIRDVI----FSLVLAG 313
Query: 306 YETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSYLDKVTKEALRM 365
+T+SS LT+ + L+++P + +K+R EI TK +L K+ YL E++R+
Sbjct: 314 RDTTSSALTWFFWLLSKHPQVMAKIRHEI-NTKFDNEDL-----EKLVYLHAALSESMRL 367
Query: 366 YPSLPQLDRISVKKYKLPNTDLTLDVGTKISIPTFAI-HYDPEYYPDPEKFDPERFSPEN 424
YP LP + K LP+ +D +KI I +A+ + D F PER+ +N
Sbjct: 368 YPPLPFNHKAPAKPDVLPSGH-KVDAESKIVICIYALGRMRSVWGEDALDFKPERWISDN 426
Query: 425 --IESRPHYTYLPFGDGPRNCIGKIL 448
+ P Y ++ F GPR C+GK L
Sbjct: 427 GGLRHEPSYKFMAFNSGPRTCLGKHL 452
>gnl|CDD|215086 PLN00168, PLN00168, Cytochrome P450; Provisional.
Length = 519
Score = 80.4 bits (198), Expect = 3e-16
Identities = 55/174 (31%), Positives = 77/174 (44%), Gaps = 20/174 (11%)
Query: 285 DDVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMA-TKKKEGE 343
D +TDD I F G +T+S+ L + + EL +NP IQSKL EI A T + E
Sbjct: 298 GDRALTDDEIVNLCSEFLNAGTDTTSTALQWIMAELVKNPSIQSKLHDEIKAKTGDDQEE 357
Query: 344 LTYEICHKMSYLDKVTKEALRMYPS----LPQ--LDRISVKKYKLPNTDLTLDVGTKISI 397
++ E HKM YL V E LR +P LP + + V Y +P G ++
Sbjct: 358 VSEEDVHKMPYLKAVVLEGLRKHPPAHFVLPHKAAEDMEVGGYLIPK-------GATVNF 410
Query: 398 PTFAIHYDPEYYPDPEKFDPERFSPE------NIESRPHYTYLPFGDGPRNCIG 445
+ D + P +F PERF ++ +PFG G R C G
Sbjct: 411 MVAEMGRDEREWERPMEFVPERFLAGGDGEGVDVTGSREIRMMPFGVGRRICAG 464
>gnl|CDD|215583 PLN03112, PLN03112, cytochrome P450 family protein; Provisional.
Length = 514
Score = 76.4 bits (188), Expect = 7e-15
Identities = 56/245 (22%), Positives = 107/245 (43%), Gaps = 30/245 (12%)
Query: 222 LSELIPLIKYLNLKIFD-------PRISQFFSNLVKTNLSYRE--KNNIKRDDFLNIMMQ 272
L + +P ++L+ + R+ +F ++ + R K DF+++++
Sbjct: 223 LGDYLPAWRWLDPYGCEKKMREVEKRVDEFHDKIIDEHRRARSGKLPGGKDMDFVDVLLS 282
Query: 273 LQIAQRGKTLSPDDVE---MTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSK 329
L + GK DDVE + D+I A + +TS+ + + E+ +NP + K
Sbjct: 283 LP-GENGKE-HMDDVEIKALMQDMIAAAT--------DTSAVTNEWAMAEVIKNPRVLRK 332
Query: 330 LRQEIMATKKKEGELTYEICHKMSYLDKVTKEALRMYPSLPQL-DRISVKKYKLPNTDLT 388
+++E+ + + + ++YL V +E RM+P+ P L S++ + +
Sbjct: 333 IQEELDSVVGRNRMVQESDLVHLNYLRCVVRETFRMHPAGPFLIPHESLRATTINGYYIP 392
Query: 389 LDVGTKISIPTFAIHYDPEYYPDPEKFDPERFSPEN-----IESRPHYTYLPFGDGPRNC 443
T++ I T + + + + D E+F PER P I P + LPF G R C
Sbjct: 393 --AKTRVFINTHGLGRNTKIWDDVEEFRPERHWPAEGSRVEISHGPDFKILPFSAGKRKC 450
Query: 444 IGKIL 448
G L
Sbjct: 451 PGAPL 455
>gnl|CDD|178550 PLN02966, PLN02966, cytochrome P450 83A1.
Length = 502
Score = 75.9 bits (186), Expect = 9e-15
Identities = 81/364 (22%), Positives = 165/364 (45%), Gaps = 39/364 (10%)
Query: 106 AKRDPIAGHLFLSKGE----------YWKRLRNK-LSPTFTSGKIKYMFPLIKKCSDQLI 154
A R P GH F+S G Y++ +R ++ F+ ++ + ++ + +++
Sbjct: 96 ADRPPHRGHEFISYGRRDMALNHYTPYYREIRKMGMNHLFSPTRVATFKHVREEEARRMM 155
Query: 155 TTIRKQIGESKQMSLEVKDYCARYTTDVIGTTAFGIEINSLENPDSEFRQVSLLVMKPSV 214
I K +S+ +++ + +T V+ AFG + N E+ + R + +L SV
Sbjct: 156 DKINKAADKSE--VVDISELMLTFTNSVVCRQAFGKKYN--EDGEEMKRFIKILYGTQSV 211
Query: 215 LQMLKAVLSELIPLIKYLN--------LKIFDPRISQFFSNLVKTNLSYREKNNIKRDDF 266
L K S+ P +L+ +K R + +V L + + + +
Sbjct: 212 LG--KIFFSDFFPYCGFLDDLSGLTAYMKECFERQDTYIQEVVNETLDPK-RVKPETESM 268
Query: 267 LNIMMQLQIAQRGKTLSPDDVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDI 326
++++M++ Q P E T D + A G +T+++ + + + L + P +
Sbjct: 269 IDLLMEIYKEQ------PFASEFTVDNVKAVILDIVVAGTDTAAAAVVWGMTYLMKYPQV 322
Query: 327 QSKLRQEIMATKKKEGE--LTYEICHKMSYLDKVTKEALRMYPSLPQL-DRISVKKYKLP 383
K + E+ K++G +T + + Y + KE LR+ P +P L R ++ K+
Sbjct: 323 LKKAQAEVREYMKEKGSTFVTEDDVKNLPYFRALVKETLRIEPVIPLLIPRACIQDTKIA 382
Query: 384 NTDLTLDVGTKISIPTFAIHYD-PEYYPDPEKFDPERFSPENIESR-PHYTYLPFGDGPR 441
D+ GT +++ +A+ D E+ P+P++F PERF + ++ + Y ++PFG G R
Sbjct: 383 GYDIP--AGTTVNVNAWAVSRDEKEWGPNPDEFRPERFLEKEVDFKGTDYEFIPFGSGRR 440
Query: 442 NCIG 445
C G
Sbjct: 441 MCPG 444
>gnl|CDD|215627 PLN03195, PLN03195, fatty acid omega-hydroxylase; Provisional.
Length = 516
Score = 72.9 bits (179), Expect = 8e-14
Identities = 90/377 (23%), Positives = 160/377 (42%), Gaps = 70/377 (18%)
Query: 115 LFLSKGEYWKRLRNKLSPTFTSGKIKYMFPLIKKCSDQLITTIRKQIGESKQMSLEVKDY 174
+F GE W++ R S F S ++ ++ + +++I Q + Q ++++D
Sbjct: 115 IFNVDGELWRKQRKTASFEFASKNLRDFSTVVFREYSLKLSSILSQASFANQ-VVDMQDL 173
Query: 175 CARYTTDVIGTTAFGIEINSL--ENPDSEFRQ--------VSLLVMKP--SVLQMLK--- 219
R T D I FG+EI +L P++ F Q V+L + P + + L
Sbjct: 174 FMRMTLDSICKVGFGVEIGTLSPSLPENPFAQAFDTANIIVTLRFIDPLWKLKKFLNIGS 233
Query: 220 -AVLSELIPLIKYLNLKIFDPRISQFFSNLVKTNLSYREKNNIKRDDFLNIMMQLQIAQR 278
A+LS+ I ++ + R ++ R+ + D L+ ++L
Sbjct: 234 EALLSKSIKVVDDFTYSVIRRRKAEM--------DEARKSGKKVKHDILSRFIEL----- 280
Query: 279 GKTLSPDDVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATK 338
G+ PD TD + F G +T+++ L++ +Y + NP + KL E+ A +
Sbjct: 281 GE--DPDS-NFTDKSLRDIVLNFVIAGRDTTATTLSWFVYMIMMNPHVAEKLYSELKALE 337
Query: 339 KKEGE--------------------LTYEICHKMSYLDKVTKEALRMYPSLPQLDRISVK 378
K+ + LTY+ K+ YL V E LR+YP++PQ + ++
Sbjct: 338 KERAKEEDPEDSQSFNQRVTQFAGLLTYDSLGKLQYLHAVITETLRLYPAVPQDPKGILE 397
Query: 379 KYKLPNTDLTLDVGTKISIPTFAIHYDP------EYY--PDPEKFDPERFSPENI-ESRP 429
LP+ GTK+ + Y P EY PD F PER+ + + ++
Sbjct: 398 DDVLPD-------GTKVKAGGM-VTYVPYSMGRMEYNWGPDAASFKPERWIKDGVFQNAS 449
Query: 430 HYTYLPFGDGPRNCIGK 446
+ + F GPR C+GK
Sbjct: 450 PFKFTAFQAGPRICLGK 466
>gnl|CDD|166628 PLN02987, PLN02987, Cytochrome P450, family 90, subfamily A.
Length = 472
Score = 72.7 bits (178), Expect = 8e-14
Identities = 55/214 (25%), Positives = 89/214 (41%), Gaps = 27/214 (12%)
Query: 240 RISQFFSNLVKTNLSYREKNNIKRDDFLNIMMQLQIAQRGKTLSPDDVEMTDDVITAQSF 299
++++ + +V E+ K+ D L L+ DD +D+ I
Sbjct: 226 KVAEALTLVVMKRRKEEEEGAEKKKDML-----------AALLASDD-GFSDEEIVDFLV 273
Query: 300 VFFFGGYETSSSVLTFCLYELARNPDIQSKLRQE---IMATKKKEGELTYEICHKMSYLD 356
GYET+S+++T + L P ++L++E I A K L + M +
Sbjct: 274 ALLVAGYETTSTIMTLAVKFLTETPLALAQLKEEHEKIRAMKSDSYSLEWSDYKSMPFTQ 333
Query: 357 KVTKEALRMYPSLPQLDR-----ISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPEYYPD 411
V E LR+ + + R I VK Y +P G K+ A+H D EY+ D
Sbjct: 334 CVVNETLRVANIIGGIFRRAMTDIEVKGYTIPK-------GWKVFASFRAVHLDHEYFKD 386
Query: 412 PEKFDPERFSPENIESRPHYTYLPFGDGPRNCIG 445
F+P R+ + + P + PFG GPR C G
Sbjct: 387 ARTFNPWRWQSNSGTTVPSNVFTPFGGGPRLCPG 420
>gnl|CDD|178373 PLN02774, PLN02774, brassinosteroid-6-oxidase.
Length = 463
Score = 70.2 bits (172), Expect = 5e-13
Identities = 47/163 (28%), Positives = 76/163 (46%), Gaps = 7/163 (4%)
Query: 289 MTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQE---IMATKKKEGELT 345
+TD+ I Q + GYET S+ + L +P +LR+E I K+ E +
Sbjct: 260 LTDEEIIDQIITILYSGYETVSTTSMMAVKYLHDHPKALQELRKEHLAIRERKRPEDPID 319
Query: 346 YEICHKMSYLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYD 405
+ M + V E R+ + + R + + +L + G +I + T I+YD
Sbjct: 320 WNDYKSMRFTRAVIFETSRLATIVNGVLRKTTQDMEL--NGYVIPKGWRIYVYTREINYD 377
Query: 406 PEYYPDPEKFDPERFSPENIESRPHYTYLPFGDGPRNCIGKIL 448
P YPDP F+P R+ +++ES + + FG G R C GK L
Sbjct: 378 PFLYPDPMTFNPWRWLDKSLESHNY--FFLFGGGTRLCPGKEL 418
>gnl|CDD|178773 PLN03234, PLN03234, cytochrome P450 83B1; Provisional.
Length = 499
Score = 67.0 bits (163), Expect = 5e-12
Identities = 78/336 (23%), Positives = 151/336 (44%), Gaps = 29/336 (8%)
Query: 122 YWKRLRNK-LSPTFTSGKIKYMFPLIKKCSDQLITTIRKQIGESKQMSLEVKDYCARYTT 180
Y++ +R + F+ ++ P+ ++ +++ I K +S ++++ + +T
Sbjct: 121 YYREMRKMCMVNLFSPNRVASFRPVREEECQRMMDKIYKAADQSG--TVDLSELLLSFTN 178
Query: 181 DVIGTTAFGIEINSLENPDSEFRQVSLLVMKPSVLQMLKAVLSELIPLIKYL-NLKIFDP 239
V+ AFG N F + +L ++L L S+L P +L NL
Sbjct: 179 CVVCRQAFGKRYNEYGTEMKRF--IDILYETQALLGTL--FFSDLFPYFGFLDNLTGLSA 234
Query: 240 RISQFFSNLVKTNLS-----YREKNNIKRD--DFLNIMMQLQIAQRGKTLSPDDVEMTDD 292
R+ + F L T L + N K++ F++++MQ+ Q P ++ T +
Sbjct: 235 RLKKAFKEL-DTYLQELLDETLDPNRPKQETESFIDLLMQIYKDQ------PFSIKFTHE 287
Query: 293 VITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKM 352
+ A G +T+++V+ + + L + P+ K + E+ +G ++ E +
Sbjct: 288 NVKAMILDIVVPGTDTAAAVVVWAMTYLIKYPEAMKKAQDEVRNVIGDKGYVSEEDIPNL 347
Query: 353 SYLDKVTKEALRMYPSLP-QLDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPEYYPD 411
YL V KE+LR+ P +P L R ++ K+ D+ T I + +A+ D + D
Sbjct: 348 PYLKAVIKESLRLEPVIPILLHRETIADAKIGGYDIP--AKTIIQVNAWAVSRDTAAWGD 405
Query: 412 -PEKFDPERFSPEN--IESRPH-YTYLPFGDGPRNC 443
P +F PERF E+ ++ + + LPFG G R C
Sbjct: 406 NPNEFIPERFMKEHKGVDFKGQDFELLPFGSGRRMC 441
>gnl|CDD|215276 PLN02500, PLN02500, cytochrome P450 90B1.
Length = 490
Score = 65.3 bits (159), Expect = 2e-11
Identities = 49/158 (31%), Positives = 71/158 (44%), Gaps = 14/158 (8%)
Query: 303 FGGYETSSSVLTFCLYELARNPDIQSKLRQE---IMATKKKEG--ELTYEICHKMSYLDK 357
F G+ETSS + ++ L P +LR+E I KK+ G EL +E KM +
Sbjct: 289 FAGHETSSVAIALAIFFLQGCPKAVQELREEHLEIARAKKQSGESELNWEDYKKMEFTQC 348
Query: 358 VTKEALRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPEYYPDPEKFDP 417
V E LR+ + L R ++K + D+ G K+ A+H D Y P+ F+P
Sbjct: 349 VINETLRLGNVVRFLHRKALKDVRYKGYDIP--SGWKVLPVIAAVHLDSSLYDQPQLFNP 406
Query: 418 ERFSPEN-------IESRPHYTYLPFGDGPRNCIGKIL 448
R+ N S ++PFG GPR C G L
Sbjct: 407 WRWQQNNNRGGSSGSSSATTNNFMPFGGGPRLCAGSEL 444
>gnl|CDD|215235 PLN02426, PLN02426, cytochrome P450, family 94, subfamily C
protein.
Length = 502
Score = 60.9 bits (148), Expect = 5e-10
Identities = 99/394 (25%), Positives = 165/394 (41%), Gaps = 63/394 (15%)
Query: 81 DPELYKYILIKDFDHFVDRGMGELDAKRDPIAGHLFLSKGEYWKRLRNKLSPTFTSGKIK 140
+PE +Y+L FD++ +G D + +F G+ W+ R S S I+
Sbjct: 90 NPENVEYMLKTRFDNY-PKGKPFSAILGDLLGRGIFNVDGDSWRFQRKMASLELGSVSIR 148
Query: 141 -YMFPLIK-KCSDQLITTIRKQIGESKQMSLEVKDYCARYTTDVIGTTAFGIEINSLEN- 197
Y F ++ + +L+ + + + L+++D R++ D I +FG++ LE
Sbjct: 149 SYAFEIVASEIESRLLPLLSSAADDGEGAVLDLQDVFRRFSFDNICKFSFGLDPGCLELS 208
Query: 198 -PDSEFRQVSLLVMKPSVLQMLKAVLSELIPLIKYLNLKIFDPRISQFFSNLVKTNLSYR 256
P SEF K S S L+ IK L L I R +
Sbjct: 209 LPISEFADAFDTASKLSA--ERAMAASPLLWKIKRL-LNIGSER---------------K 250
Query: 257 EKNNIKRDDFLNIMMQLQIAQRGKT--------LS------PDDVEMTDDVITAQSFVFF 302
K IK ++ + I QR K LS DD + D V++ F
Sbjct: 251 LKEAIK---LVDELAAEVIRQRRKLGFSASKDLLSRFMASINDDKYLRDIVVS-----FL 302
Query: 303 FGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGEL-TYEICHKMSYLDKVTKE 361
G +T +S LT + L+++P++ S +R+E E ++E +M YL E
Sbjct: 303 LAGRDTVASALTSFFWLLSKHPEVASAIREEADRVMGPNQEAASFEEMKEMHYLHAALYE 362
Query: 362 ALRMYPSLPQLD-RISVKKYKLPNTDLT-LDVGTKISIPTFAIHYDPEYY-PDPEKFDPE 418
++R++P + Q D + + + LP D T + GT+++ +A+ + PD +F PE
Sbjct: 363 SMRLFPPV-QFDSKFAAEDDVLP--DGTFVAKGTRVTYHPYAMGRMERIWGPDCLEFKPE 419
Query: 419 R------FSPENIESRPHYTYLPFGDGPRNCIGK 446
R F PEN + Y F G R C+GK
Sbjct: 420 RWLKNGVFVPENP-----FKYPVFQAGLRVCLGK 448
>gnl|CDD|166612 PLN02971, PLN02971, tryptophan N-hydroxylase.
Length = 543
Score = 55.8 bits (134), Expect = 3e-08
Identities = 46/204 (22%), Positives = 91/204 (44%), Gaps = 25/204 (12%)
Query: 255 YREKNNIKRDDFLNIMMQLQIAQRGKTLSPDDVEMT-DDVITAQSFVFFFGGYETSSSVL 313
+RE + +DFL+I + ++ L+ D+++ T +++ A + S+ +
Sbjct: 296 WREGKRTQIEDFLDIFISIKDEAGQPLLTADEIKPTIKELVMAAP--------DNPSNAV 347
Query: 314 TFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSYLDKVTKEALRMYP----SL 369
+ + E+ P+I K +EI KE + K++Y+ + +EA R++P +L
Sbjct: 348 EWAMAEMINKPEILHKAMEEIDRVVGKERFVQESDIPKLNYVKAIIREAFRLHPVAAFNL 407
Query: 370 PQ--LDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPEYYPDPEKFDPERFSPENIE- 426
P L +V Y +P G+++ + + + +P+ + DP F PER E E
Sbjct: 408 PHVALSDTTVAGYHIPK-------GSQVLLSRYGLGRNPKVWSDPLSFKPERHLNECSEV 460
Query: 427 --SRPHYTYLPFGDGPRNCIGKIL 448
+ ++ F G R C L
Sbjct: 461 TLTENDLRFISFSTGKRGCAAPAL 484
>gnl|CDD|178592 PLN03018, PLN03018, homomethionine N-hydroxylase.
Length = 534
Score = 48.5 bits (115), Expect = 5e-06
Identities = 53/231 (22%), Positives = 96/231 (41%), Gaps = 38/231 (16%)
Query: 228 LIKYLNLKIFDPRISQFFSNLVKTNLSYREKN-NIKRDDFLNIMMQLQIAQRGKTLSPDD 286
L++ N I D R+ +REK +D+L+ + L+ Q GK L
Sbjct: 266 LVRSYNNPIIDERVEL-----------WREKGGKAAVEDWLDTFITLK-DQNGKYL---- 309
Query: 287 VEMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTY 346
+T D I AQ F + ++ + + L E+ +NP+I K +E+ K+ +
Sbjct: 310 --VTPDEIKAQCVEFCIAAIDNPANNMEWTLGEMLKNPEILRKALKELDEVVGKDRLVQE 367
Query: 347 EICHKMSYLDKVTKEALRMYPSL----PQLDR--ISVKKYKLPNTDLTLDVGTKISIPTF 400
++YL +E R++PS P + R ++ Y +P G+ I +
Sbjct: 368 SDIPNLNYLKACCRETFRIHPSAHYVPPHVARQDTTLGGYFIPK-------GSHIHVCRP 420
Query: 401 AIHYDPEYYPDPEKFDPER------FSPENIESRPHYTYLPFGDGPRNCIG 445
+ +P+ + DP ++PER + E ++ F G R C+G
Sbjct: 421 GLGRNPKIWKDPLVYEPERHLQGDGITKEVTLVETEMRFVSFSTGRRGCVG 471
>gnl|CDD|215350 PLN02648, PLN02648, allene oxide synthase.
Length = 480
Score = 44.9 bits (107), Expect = 6e-05
Identities = 44/199 (22%), Positives = 70/199 (35%), Gaps = 59/199 (29%)
Query: 240 RISQFFSNLVKTNLSYREKNNIKRDDFLNIMMQLQIAQRGKTLSPDDVEMTDDVITAQSF 299
++ FF L EK I R++ L+ L
Sbjct: 246 KLYDFFRASATEALDLAEKFGISREEALH---NL-------------------------- 276
Query: 300 VFF-----FGGYETSSSVLTFCLYELAR-NPDIQSKLRQEIM-ATKKKEGELTYEICHKM 352
+F FGG+ L + R ++Q++L +E+ A K G +T+ KM
Sbjct: 277 LFVLGFNAFGGF---KIFFPALLKWVGRAGEELQARLAEEVRSAVKAGGGGVTFAALEKM 333
Query: 353 SYLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLTL---DVGTKI--------SIPTFA 401
+ V EALR+ P +P +Y D + D +I P
Sbjct: 334 PLVKSVVYEALRIEPPVPF-------QYGRAREDFVIESHDAAFEIKKGEMLFGYQP-LV 385
Query: 402 IHYDPEYYPDPEKFDPERF 420
DP+ + PE+F P+RF
Sbjct: 386 TR-DPKVFDRPEEFVPDRF 403
>gnl|CDD|215600 PLN03141, PLN03141, 3-epi-6-deoxocathasterone 23-monooxygenase;
Provisional.
Length = 452
Score = 43.6 bits (103), Expect = 2e-04
Identities = 41/171 (23%), Positives = 73/171 (42%), Gaps = 27/171 (15%)
Query: 288 EMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYE 347
E+TDD+I+ G ++ ++T + L+ P +L +E M K+ + +
Sbjct: 246 ELTDDLISDNMIDMMIPGEDSVPVLMTLAVKFLSDCPVALQQLTEENMKLKRLKADTGEP 305
Query: 348 IC----HKMSYLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLTLDVGTK-ISIP---- 398
+ + + V E LRM + + R ++K DV K IP
Sbjct: 306 LYWTDYMSLPFTQNVITETLRMGNIINGVMRKAMK-----------DVEIKGYLIPKGWC 354
Query: 399 TFA----IHYDPEYYPDPEKFDPERFSPENIESRPHYTYLPFGDGPRNCIG 445
A +H D E Y +P +F+P R+ +++ + ++ PFG G R C G
Sbjct: 355 VLAYFRSVHLDEENYDNPYQFNPWRWQEKDMNNS---SFTPFGGGQRLCPG 402
>gnl|CDD|216966 pfam02301, HORMA, HORMA domain. The HORMA (for Hop1p, Rev7p and
MAD2) domain has been suggested to recognise chromatin
states that result from DNA adducts, double stranded
breaks or non-attachment to the spindle and acts as an
adaptor that recruits other proteins. MAD2 is a spindle
checkpoint protein which prevents progression of the
cell cycle upon detection of a defect in mitotic spindle
integrity.
Length = 186
Score = 31.5 bits (72), Expect = 0.58
Identities = 19/101 (18%), Positives = 41/101 (40%), Gaps = 11/101 (10%)
Query: 138 KIKYMFPLIKKCSDQLITTIRKQIGES------KQMSLEVKDYCARYTTDVIGTTAFGIE 191
+ KY P++ QLI + K + ++ K++ L + D +V+ F
Sbjct: 35 RKKYNLPVLVSEDPQLIDYLEKGVFDALEKGYLKKLVLVIYDDKDPEKNEVLERYQFDFS 94
Query: 192 INSLENPDSEFRQVSLLVMKPSVLQMLKAVLSELIPLIKYL 232
S+ + Q ++A++ +LI L+++L
Sbjct: 95 YFPSGGNSSDSEKTED-----ETRQEIRALIRQLIALVQFL 130
>gnl|CDD|178142 PLN02527, PLN02527, aspartate carbamoyltransferase.
Length = 306
Score = 28.6 bits (64), Expect = 6.3
Identities = 29/105 (27%), Positives = 50/105 (47%), Gaps = 25/105 (23%)
Query: 283 SPDDVEMTDDV---ITAQSFVFFFGGYETSSSVLTFCLYELARNPDI--QSKLRQEIMAT 337
+PD V+M DD+ +T++ +E SS L E+A D+ Q+++++E
Sbjct: 185 APDVVKMKDDIKDYLTSKGV-----EWEESSD-----LMEVASKCDVLYQTRIQRERFGE 234
Query: 338 KKKEGELTYEICHKMSYLDK-----VTKEALRMYPSLPQLDRISV 377
+ YE +DK + K A+ M+P LP+LD I+
Sbjct: 235 RIDL----YEAARGKYIVDKKVMDVLPKHAVVMHP-LPRLDEITT 274
>gnl|CDD|143383 cd07878, STKc_p38beta_MAPK11, Catalytic domain of the
Serine/Threonine Kinase, p38beta Mitogen-Activated
Protein Kinase. Serine/Threonine Kinases (STKs),
p38beta subfamily, catalytic (c) domain. STKs catalyze
the transfer of the gamma-phosphoryl group from ATP to
serine/threonine residues on protein substrates. The
p38beta subfamily is part of a larger superfamily that
includes the catalytic domains of other protein STKs,
protein tyrosine kinases, RIO kinases, aminoglycoside
phosphotransferase, choline kinase, and phosphoinositide
3-kinase. p38 kinases are mitogen-activated protein
kinases (MAPKs), serving as important mediators of
cellular responses to extracellular signals. They are
activated by the MAPK kinases MKK3 and MKK6, which in
turn are activated by upstream MAPK kinase kinases
including TAK1, ASK1, and MLK3, in response to cellular
stresses or inflammatory cytokines. Vertebrates contain
four isoforms of p38, named alpha, beta, gamma, and
delta. p38beta, also called MAPK11, is widely expressed
in tissues and shows more similarity with p38alpha than
with the other isoforms. Both are sensitive to
pyridinylimidazoles and share some common substrates
such as MAPK activated protein kinase 2 (MK2) and the
transcription factors ATF2, c-Fos and, ELK-1. p38beta is
involved in regulating the activation of the
cyclooxygenase-2 promoter and the expression of
TGFbeta-induced alpha-smooth muscle cell actin.
Length = 343
Score = 28.9 bits (64), Expect = 6.4
Identities = 28/89 (31%), Positives = 39/89 (43%), Gaps = 19/89 (21%)
Query: 354 YLDKVTKEALRMY----PSLPQLDRISVKKYKLP------NTDLTLDVGTKISI------ 397
L K++ E R Y P +PQ D + + P L LD +IS
Sbjct: 239 VLKKISSEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALAH 298
Query: 398 PTFAIHYDPEYYPDPEKFDPERFSPENIE 426
P F+ ++DPE P+ E +D SPEN E
Sbjct: 299 PYFSQYHDPEDEPEAEPYDE---SPENKE 324
>gnl|CDD|221771 pfam12787, EcsC, EcsC protein family. Proteins in this family are
related to EcsC from B. subtilis. This protein is found
in an operon with EcsA and EcsB which are components of
an ABC transport system. The function of this protein is
unknown.
Length = 242
Score = 28.3 bits (64), Expect = 6.6
Identities = 22/76 (28%), Positives = 32/76 (42%), Gaps = 10/76 (13%)
Query: 124 KRLRNKLSPTFTSGKIKYMFPLIKKCSDQLITTIRKQIGESKQMSLEVKDYCAR-----Y 178
K + K+ T+ IK M L+ D L + + + + KQ+ LE D AR Y
Sbjct: 35 KLIPEKVHKKITAA-IKEMGQLVLSGGDYLTSKSVESLEDLKQLPLEEMDKLAREVINLY 93
Query: 179 ----TTDVIGTTAFGI 190
+ GT A GI
Sbjct: 94 KKTAAVEGAGTGAGGI 109
>gnl|CDD|219973 pfam08695, Coa1, Cytochrome oxidase complex assembly protein 1.
Coa1 is an inner mitochondrial membrane protein that
associates with Shy1 and is required for cytochrome
oxidase complex IV assembly. It contains a conserved
hydrophobic segment (amino acids 74-92) with the
potential to form a membrane-spanning helix. The
N-terminus of Coa1 is rich in positively charged amino
acids and could form an amphipathic alpha helix,
characteristic of a mitochondrial presequence. A
cleavage site for the mitochondrial processing peptidase
is predicted adjacent to the presequence. Upon in vitro
import into mitochondria, Coa1 is processed to a mature
form, indicating that it possesses a cleavable
presequence. The eukaryotic cytochrome oxidase complex
consists of 12-13 subunits, with three mitochondrial
encoded subunits, Cox1-Cox3, forming the core enzyme.
Translation of the Cox1 transcript requires the two
promoters, Pet309 and Mss51, and the latter has an
additional role in translational elongation. Coa1 is
necessary for linking the activity of Mss51 to Cox1
insertion into the assembly complex.
Length = 117
Score = 27.2 bits (61), Expect = 7.4
Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 3/42 (7%)
Query: 294 ITAQSFVFFFGGYE-TSSSVLTFCLYELARNPDIQSKLRQEI 334
+ A F YE TSS + LY+L R+P+++ L + I
Sbjct: 11 VGAALAYIFN--YEKTSSPIYRSTLYQLRRSPEVRELLGENI 50
>gnl|CDD|143382 cd07877, STKc_p38alpha_MAPK14, Catalytic domain of the
Serine/Threonine Kinase, p38alpha Mitogen-Activated
Protein Kinase. Serine/Threonine Kinases (STKs),
p38alpha subfamily, catalytic (c) domain. STKs catalyze
the transfer of the gamma-phosphoryl group from ATP to
serine/threonine residues on protein substrates. The
p38alpha subfamily is part of a larger superfamily that
includes the catalytic domains of other protein STKs,
protein tyrosine kinases, RIO kinases, aminoglycoside
phosphotransferase, choline kinase, and phosphoinositide
3-kinase. p38 kinases are mitogen-activated protein
kinases (MAPKs), serving as important mediators of
cellular responses to extracellular signals. They are
activated by the MAPK kinases MKK3 and MKK6, which in
turn are activated by upstream MAPK kinase kinases
including TAK1, ASK1, and MLK3, in response to cellular
stresses or inflammatory cytokines. Vertebrates contain
four isoforms of p38, named alpha, beta, gamma, and
delta. p38alpha, also called MAPK14, is expressed in
most tissues and is the major isoform involved in the
immune and inflammatory response. It is the central p38
MAPK involved in myogenesis. It plays a role in
regulating cell cycle check-point transition and
promoting cell differentiation. p38alpha also regulates
cell proliferation and death through crosstalk with the
JNK pathway. Its substrates include MAPK activated
protein kinase 2 (MK2), MK5, and the transcription
factors ATF2 and Mitf.
Length = 345
Score = 28.5 bits (63), Expect = 8.7
Identities = 20/98 (20%), Positives = 42/98 (42%), Gaps = 17/98 (17%)
Query: 353 SYLDKVTKEALRMY-PSLPQLDRIS---------------VKKYKLPNTDLTLDVGTKIS 396
L K++ E+ R Y SL Q+ +++ ++K + ++D + ++
Sbjct: 240 ELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA 299
Query: 397 IPTFAIHYDPEYYPDPEKFDPERFSPE-NIESRPHYTY 433
FA ++DP+ P + +D S + I+ TY
Sbjct: 300 HAYFAQYHDPDDEPVADPYDQSFESRDLLIDEWKSLTY 337
>gnl|CDD|233742 TIGR02135, phoU_full, phosphate transport system regulatory protein
PhoU. This model describes PhoU, a regulatory protein
of unknown mechanism for high-affinity phosphate ABC
transporter systems. The protein consists of two copies
of the domain described by pfam01895. Deletion of PhoU
activates constitutive expression of the phosphate ABC
transporter and allows phosphate transport, but causes a
growth defect and so likely has some second function
[Regulatory functions, Other, Transport and binding
proteins, Anions].
Length = 212
Score = 28.0 bits (63), Expect = 9.0
Identities = 13/73 (17%), Positives = 27/73 (36%), Gaps = 2/73 (2%)
Query: 190 IEINSLENPDSEFRQVSLLVMKPSVLQMLKAVLSELIPLIKYLNLKI--FDPRISQFFSN 247
+ E L M L+MLK L + L ++ D R+ + +
Sbjct: 101 RALRLKEEDAKPKHLEELEKMGKLALKMLKDALDAFLNKDAELARQVAEMDERVDELYRQ 160
Query: 248 LVKTNLSYREKNN 260
+ + ++Y ++N
Sbjct: 161 IFRELVTYMKENP 173
>gnl|CDD|182181 PRK09983, pflD, putative formate acetyltransferase 2; Provisional.
Length = 765
Score = 28.6 bits (64), Expect = 9.4
Identities = 10/30 (33%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
Query: 196 ENPDSEFRQVSLLVMKPSVLQMLK-AVLSE 224
+ P++ F Q +LL+++ S +L+ A L+E
Sbjct: 182 QQPENHFYQAALLLLEASQKHILRYAELAE 211
Database: CDD.v3.10
Posted date: Mar 20, 2013 7:55 AM
Number of letters in database: 10,937,602
Number of sequences in database: 44,354
Lambda K H
0.320 0.138 0.396
Gapped
Lambda K H
0.267 0.0740 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 44354
Number of Hits to DB: 23,366,359
Number of extensions: 2311952
Number of successful extensions: 2095
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2011
Number of HSP's successfully gapped: 62
Length of query: 448
Length of database: 10,937,602
Length adjustment: 100
Effective length of query: 348
Effective length of database: 6,502,202
Effective search space: 2262766296
Effective search space used: 2262766296
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (27.3 bits)