RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy2447
(448 letters)
>d1tqna_ a.104.1.1 (A:) Mammalian cytochrome P450 3a4 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 472
Score = 200 bits (509), Expect = 8e-60
Identities = 135/381 (35%), Positives = 214/381 (56%), Gaps = 14/381 (3%)
Query: 72 MMTPKLMVTDPELYKYILIKD-FDHFVDRGMGELDAKRDPIAGHLFLSKGEYWKRLRNKL 130
P L +TDP++ K +L+K+ + F +R + + +++ E WKRLR+ L
Sbjct: 50 GQQPVLAITDPDMIKTVLVKECYSVFTNRRP---FGPVGFMKSAISIAEDEEWKRLRSLL 106
Query: 131 SPTFTSGKIKYMFPLIKKCSDQLITTIRKQIGESKQMSLEVKDYCARYTTDVIGTTAFGI 190
SPTFTSGK+K M P+I + D L+ +R++ K + +KD Y+ DVI +T+FG+
Sbjct: 107 SPTFTSGKLKEMVPIIAQYGDVLVRNLRREAETGKPV--TLKDVFGAYSMDVITSTSFGV 164
Query: 191 EINSLENPDSEFRQVSLLVMKPSVLQ---MLKAVLSELIPLIKYLNLKIFDPRISQFFSN 247
I+SL NP F + + +++ L + V LIP+++ LN+ +F ++ F
Sbjct: 165 NIDSLNNPQDPFVENTKKLLRFDFLDPFFLSITVFPFLIPILEVLNICVFPREVTNFLRK 224
Query: 248 LVKTNLSYREKNNIKRDDFLNIMMQLQIAQRGKTLSPDDVEMTDDVITAQSFVFFFGGYE 307
VK R ++ K +QL I + + ++D + AQS +F F GYE
Sbjct: 225 SVKRMKESRLEDTQKHRVD---FLQLMIDSQNSKETESHKALSDLELVAQSIIFIFAGYE 281
Query: 308 TSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSYLDKVTKEALRMYP 367
T+SSVL+F +YELA +PD+Q KL++EI A + TY+ +M YLD V E LR++P
Sbjct: 282 TTSSVLSFIMYELATHPDVQQKLQEEIDAVLPNKAPPTYDTVLQMEYLDMVVNETLRLFP 341
Query: 368 SLPQLDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPEYYPDPEKFDPERFSPENIES 427
+L+R+ K ++ + + G + IP++A+H DP+Y+ +PEKF PERFS +N ++
Sbjct: 342 IAMRLERVCKKDVEIN--GMFIPKGVVVMIPSYALHRDPKYWTEPEKFLPERFSKKNKDN 399
Query: 428 RPHYTYLPFGDGPRNCIGKIL 448
Y Y PFG GPRNCIG
Sbjct: 400 IDPYIYTPFGSGPRNCIGMRF 420
>d1po5a_ a.104.1.1 (A:) Mammalian cytochrome p450 2b4 {Rabbit
(Oryctolagus cuniculus) [TaxId: 9986]}
Length = 465
Score = 183 bits (465), Expect = 2e-53
Identities = 60/375 (16%), Positives = 126/375 (33%), Gaps = 6/375 (1%)
Query: 72 MMTPKLMVTDPELYKYILIKDFDHFVDRGMGELDAKRDPIAGHLFLSKGEYWKRLRNKLS 131
P +++ + + L+ + F RG + + + GE W+ LR
Sbjct: 44 GSRPVVVLCGTDAIREALVDQAEAFSGRGKIAV-VDPIFQGYGVIFANGERWRALRRFSL 102
Query: 132 PTFTSGKIKYMFPLIKKCSDQLITTIRKQIGESKQMSLEVKDYCARYTTDVIGTTAFGIE 191
T + +++ + + +++ +SK L+ T+++I + FG
Sbjct: 103 ATMRDFGMGKRS--VEERIQEEARCLVEELRKSKGALLDNTLLFHSITSNIICSIVFGKR 160
Query: 192 INSLENPDSEFRQVSLLVMKPSVLQMLKAVLSELIPLIKYLNLKIFDPRISQFFSNLVKT 251
+ + + + L + R Q + +
Sbjct: 161 FDYKDPVFLRLLDLFFQSFSLISSFSSQVFELFSGFLKHFPGTHRQIYRNLQEINTFIGQ 220
Query: 252 NLSYREKNNIKRDDFLNIMMQLQIAQRGKTLSPDDVEMTDDVITAQSFVFFFGGYETSSS 311
S + + + + + K S E + FF G ET+S+
Sbjct: 221 --SVEKHRATLDPSNPRDFIDVYLLRMEKDKSDPSSEFHHQNLILTVLSLFFAGTETTST 278
Query: 312 VLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSYLDKVTKEALRMYPSLPQ 371
L + + + P + ++++EI + KM Y D V E R+ +P
Sbjct: 279 TLRYGFLLMLKYPHVTERVQKEIEQVIGSHRPPALDDRAKMPYTDAVIHEIQRLGDLIPF 338
Query: 372 LDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPEYYPDPEKFDPERFSPENIESRPHY 431
+V K + T++ + +DP Y+ P F+P F N + +
Sbjct: 339 GVPHTVTKDTQFR-GYVIPKNTEVFPVLSSALHDPRYFETPNTFNPGHFLDANGALKRNE 397
Query: 432 TYLPFGDGPRNCIGK 446
++PF G R C+G+
Sbjct: 398 GFMPFSLGKRICLGE 412
>d3czha1 a.104.1.1 (A:40-502) Vitamin D 25-hydroxylase Cyp2R1 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 463
Score = 171 bits (433), Expect = 6e-49
Identities = 62/377 (16%), Positives = 129/377 (34%), Gaps = 5/377 (1%)
Query: 72 MMTPKLMVTDPELYKYILIKDFDHFVDRGMGELDAKRDPIAGHLFLSKGEYWKRLRNKLS 131
+++ ++ K L+ + F DR L K + G L G W R
Sbjct: 43 GGISTVVLNGYDVVKECLVHQSEIFADRPCLPLFMKMTKMGGLLNSRYGRGWVDHRRLAV 102
Query: 132 PTFTSGKIKYMFPLIKKCSDQLITTIRKQIGESKQMSLEVKDYCARYTTDVIGTTAFGIE 191
+F + + I K + K +++ FG
Sbjct: 103 NSFRYFGYGQKS--FESKILEETKFFNDAIETYKGRPFDFKQLITNAVSNITNLIIFGER 160
Query: 192 INSLENPDSEFRQVSLLVMKPSVLQMLKAVLSELIPLIKYLNLKIFDPRISQFFSNLVKT 251
+ ++ ++ L P I L
Sbjct: 161 FTYEDTDFQHMIELFSENVEL--AASASVFLYNAFPWIGILPFGKHQQLFRNAAVVYDFL 218
Query: 252 NLSYREKNNIKRDDFLNIMMQLQIAQRGKTLSPDDVEMTDDVITAQSFVFFFGGYETSSS 311
+ + + ++ + + + + + + + + G ET+++
Sbjct: 219 SRLIEKASVNRKPQLPQHFVDAYLDEMDQGKNDPSSTFSKENLIFSVGELIIAGTETTTN 278
Query: 312 VLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSYLDKVTKEALRMYPSLPQ 371
VL + + +A P+IQ ++++EI G+ +++ KM Y + V E LR +P
Sbjct: 279 VLRWAILFMALYPNIQGQVQKEIDLIMGPNGKPSWDDKCKMPYTEAVLHEVLRFCNIVPL 338
Query: 372 LDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPEYYPDPEKFDPERFSPENIESRPHY 431
+ + + ++ GT + +++H+D +Y+ DPE F PERF +
Sbjct: 339 GIFHATSEDAVVR-GYSIPKGTTVITNLYSVHFDEKYWRDPEVFHPERFLDSSGYFAKKE 397
Query: 432 TYLPFGDGPRNCIGKIL 448
+PF G R+C+G+ L
Sbjct: 398 ALVPFSLGRRHCLGEHL 414
>d1r9oa_ a.104.1.1 (A:) Mammalian cytochrome p450 2c9 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 467
Score = 157 bits (396), Expect = 1e-43
Identities = 69/377 (18%), Positives = 141/377 (37%), Gaps = 6/377 (1%)
Query: 72 MMTPKLMVTDPELYKYILIKDFDHFVDRGMGELDAKRDPIAGHLFLSKGEYWKRLRNKLS 131
+ P +++ E K LI + F RG+ L A+R + S G+ WK +R
Sbjct: 45 GLKPIVVLHGYEAVKEALIDLGEEFSGRGIFPL-AERANRGFGIVFSNGKKWKEIRRFSL 103
Query: 132 PTFTSGKIKYMFPLIKKCSDQLITTIRKQIGESKQMSLEVKDYCARYTTDVIGTTAFGIE 191
T + + + + + +++ ++K + +VI + F
Sbjct: 104 MTLRNFGMGKRSIEDRVQ--EEARCLVEELRKTKASPCDPTFILGCAPCNVICSIIFHKR 161
Query: 192 INSLENPDSEFRQVSLLVMKPSVLQMLKAVLSELIPLIKYLNLKIFDPRISQFFSNLVKT 251
+ + + +K ++ + + + + F + +
Sbjct: 162 FDYKDQQFLNLMEKLNENIKILSSPWIQICNNFSPIIDYFPGTHNKLLKNVAFMKSYILE 221
Query: 252 NLSYREKNNIKRDDFLNIMMQLQIAQRGKTLSPDDVEMTDDVITAQSFVFFFGGYETSSS 311
+ +++ + I L ++ K P E T + + + F G ET+S+
Sbjct: 222 KVKEHQESMDMNNPQDFIDCFLMKMEKEKHNQPS--EFTIESLENTAVDLFGAGTETTST 279
Query: 312 VLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSYLDKVTKEALRMYPSLPQ 371
L + L L ++P++ +K+++EI + + M Y D V E R LP
Sbjct: 280 TLRYALLLLLKHPEVTAKVQEEIERVIGRNRSPCMQDRSHMPYTDAVVHEVQRYIDLLPT 339
Query: 372 LDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPEYYPDPEKFDPERFSPENIESRPHY 431
+ + + GT I I ++ +D + +P+PE FDP F E +
Sbjct: 340 SLPH-AVTCDIKFRNYLIPKGTTILISLTSVLHDNKEFPNPEMFDPHHFLDEGGNFKKSK 398
Query: 432 TYLPFGDGPRNCIGKIL 448
++PF G R C+G+ L
Sbjct: 399 YFMPFSAGKRICVGEAL 415
>d2ij2a1 a.104.1.1 (A:3-455) Cytochrome P450 bm-3 {Bacillus
megaterium [TaxId: 1404]}
Length = 453
Score = 132 bits (332), Expect = 8e-35
Identities = 88/378 (23%), Positives = 154/378 (40%), Gaps = 22/378 (5%)
Query: 72 MMTPKLMVTDPELYKYILIKDFDHFVDRGMGELDAKRDPIAGHLFLS--KGEYWKRLRNK 129
++ L K + L RD LF S + WK+ N
Sbjct: 43 PGRVTRYLSSQRLIKEACDESRFDKNLSQA--LKFVRDFAGDGLFTSWTHEKNWKKAHNI 100
Query: 130 LSPTFTSGKIKYMFPLIKKCSDQLITTIRKQIGESKQMSLEVKDYCARYTTDVIGTTAFG 189
L P+F+ +K ++ + Q ++K + +EV + R T D IG F
Sbjct: 101 LLPSFSQQAMKGYHAMMVDIAVQ---LVQKWERLNADEHIEVPEDMTRLTLDTIGLCGFN 157
Query: 190 IEINSLENPDSEFRQVSLLVMKPSVLQMLKAVLSELIPLIKYLNLKIFDPRISQFFSNLV 249
NS S M ++ + + + Y K + ++LV
Sbjct: 158 YRFNSFYRDQPHPFITS---MVRALDEAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLV 214
Query: 250 KTNLSYREKNNIKRDDFLNIMMQLQIAQRGKTLSPDDVEMTDDVITAQSFVFFFGGYETS 309
++ R+ + + DD L M+ + + G+ + D+ I Q F G+ET+
Sbjct: 215 DKIIADRKASGEQSDDLLTHMLNGKDPETGE-------PLDDENIRYQIITFLIAGHETT 267
Query: 310 SSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSYLDKVTKEALRMYPSL 369
S +L+F LY L +NP + K E A + +Y+ ++ Y+ V EALR++P+
Sbjct: 268 SGLLSFALYFLVKNPHVLQK-AAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPT- 325
Query: 370 PQLDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPEYY-PDPEKFDPERFSPENIESR 428
+ K+ + + L+ G ++ + +H D + D E+F PERF EN +
Sbjct: 326 APAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF--ENPSAI 383
Query: 429 PHYTYLPFGDGPRNCIGK 446
P + + PFG+G R CIG+
Sbjct: 384 PQHAFKPFGNGQRACIGQ 401
>d1izoa_ a.104.1.1 (A:) Cytochrome p450 152a1 (Bs-beta) {Bacillus
subtilis [TaxId: 1423]}
Length = 411
Score = 101 bits (252), Expect = 3e-24
Identities = 52/381 (13%), Positives = 103/381 (27%), Gaps = 62/381 (16%)
Query: 72 MMTPKLMVTDPELYKYILIKDFDHFVDRGMGELDAKRDPIAGH--LFLSKGEYWKRLRNK 129
+ + +T E K D + + + G + G +
Sbjct: 37 LGKNFICMTGAEAAKVFYDTDRFQRQNAL---PKRVQKSLFGVNAIQGMDGSAHIHRKML 93
Query: 130 LSPTFTSGKIKYMFPLIKKCSDQLITTIRKQIGESKQMSLEVKDYCARYTTDVIGTTAFG 189
T K + L+ + +T K V A
Sbjct: 94 FLSLMTPPHQKRLAELMTEEWKAAVTRWEKADEVVLFE------EAKEILCRVACYWAGV 147
Query: 190 IEINSLENPDSEFRQVSLLVMKPSVLQMLKAVLSELIPLIKYLNLKIFDPRISQFFSNLV 249
++E ++ + + M+ A + K + PR ++ ++
Sbjct: 148 ------PLKETEVKERA-----DDFIDMVDAFGAVGPRHWKGRRAR---PRAEEWIEVMI 193
Query: 250 KTNLSYREKNNIKRDDFLNIMMQLQIAQRGKTLSPDDVEMTDDVITAQSFVFFFGGYETS 309
+ + K L+ M +D D + A +
Sbjct: 194 EDARAGLLKT--TSGTALHEMAFHT---------QEDGSQLDSRMAAIELINVLRPIVAI 242
Query: 310 SSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSYLDKVTKEALRMYPSL 369
S L F L +P + + + +E R YP
Sbjct: 243 SYFLVFSALALHEHPKYK-----------------EWLRSGNSREREMFVQEVRRYYPFG 285
Query: 370 PQLDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPEYYPDPEKFDPERFSPENIESRP 429
P L + K + + GT + + + ++DP + P++F PERF+
Sbjct: 286 PFLGALVKKDF--VWNNCEFKKGTSVLLDLYGTNHDPRLWDHPDEFRPERFAERE---EN 340
Query: 430 HYTYLPFGDG----PRNCIGK 446
+ +P G G C G+
Sbjct: 341 LFDMIPQGGGHAEKGHRCPGE 361
>d1ueda_ a.104.1.1 (A:) p450 monoxygenase OxyC {Amycolatopsis
orientalis [TaxId: 31958]}
Length = 403
Score = 97.1 bits (240), Expect = 1e-22
Identities = 56/375 (14%), Positives = 102/375 (27%), Gaps = 74/375 (19%)
Query: 78 MVTDPELYKYILIKDFDHFVDRGMGELDAKRDPI----AGHLFLSKGEYWKRLRNKLSPT 133
E+ + IL D +HF R + G + RLR L+P
Sbjct: 54 QAHGYEVVRRIL-GDHEHFTTRPQFTQSKSGAHVEAQFVGQISTYDPPEHTRLRKMLTPE 112
Query: 134 FTSGKIKYMFPLIKKCSDQLITTIRKQIGESKQMSLEVKDYCARYTTDVIGTTAFGIEIN 193
FT +I+ M P I+ D + + + + L A
Sbjct: 113 FTVRRIRRMEPAIQSLIDDRLDLLEAEGPSADLQGLFADPVGAH------------ALCE 160
Query: 194 SLENPDSEFRQVSLLVMKPSVLQMLKAVLSELIPLIKYLNLKIFDPRISQFFSNLVKTNL 253
L P + R+ + + + + ++ N
Sbjct: 161 LLGIPRDDQREFVRRIRRNA----------------------DLSRGLKARAADSAAFNR 198
Query: 254 SYREKNNIKRDDFLNIMMQLQIAQRGKTLSPDDVEMTDDVITAQSFVFFFGGYETSSSVL 313
+R D + ++ + + G + TD+ + GG ET + ++
Sbjct: 199 YLDNLLARQRADPDDGLLGMIVRDHGDNV-------TDEELKGLCTALILGGVETVAGMI 251
Query: 314 TFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSYLDKVTKEALRMYPSLPQLD 373
F + L NP L + V + + P
Sbjct: 252 GFGVLALLDNPGQIELLFE-----------------SPEKAERVVNELVRYLSPVQAPNP 294
Query: 374 RISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPEYYPDPEKFDPERFSPENIESRPHYTY 433
R + + + G + + D PDP+ D R +
Sbjct: 295 R--LAIKDVVIDGQLIKAGDYVLCSILMANRDEALTPDPDVLDANRA---------AVSD 343
Query: 434 LPFGDGPRNCIGKIL 448
+ FG G C+G L
Sbjct: 344 VGFGHGIHYCVGAAL 358
>d1odoa_ a.104.1.1 (A:) Cyp154a1 monooxygenase {Streptomyces
coelicolor [TaxId: 1902]}
Length = 401
Score = 89.5 bits (220), Expect = 4e-20
Identities = 56/385 (14%), Positives = 113/385 (29%), Gaps = 69/385 (17%)
Query: 70 EAMMTPKLMVTDPELYKYILIKDFDHFVDRG--------MGELDAKRDPIAGHLFLSKGE 121
+ + V+DP L K +L R +G ++F + G
Sbjct: 28 DVLGVQAWSVSDPVLLKQLLTSSDVSKDARAHWPAFGEVVGTWPLALWVAVENMFTAYGP 87
Query: 122 YWKRLRNKLSPTFTSGKIKYMFPLIKKCSDQLITTIRKQIGESKQMSLEVKDYCARYTTD 181
++LR ++P F++ ++ M P ++ L+ + + + Y
Sbjct: 88 NHRKLRRLVAPAFSARRVDAMRPAVEAMVTGLVDRLAELPAGEPVDLRQELAYPLPIAVI 147
Query: 182 VIGTTAFGIEINSLENPDSEFRQVSLLVMKPSVLQMLKAVLSELIPLIKYLNLKIFDPRI 241
+ + D V + +A + L ++
Sbjct: 148 ------GHLMGVPQDRRDGFRALVDGVFDTTLDQAEAQANTARLYEVLDQ---------- 191
Query: 242 SQFFSNLVKTNLSYREKNNIKRDDFLNIMMQLQIAQRGKTLSPDDVEMTDDVITAQSFVF 301
K DD ++++ + + D ++ + + +
Sbjct: 192 ------------LIAAKRATPGDDMTSLLIAARDDEG------DGDRLSPEELRDTLLLM 233
Query: 302 FFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSYLDKVTKE 361
GYET+ +V+ ++ L PD + V +E
Sbjct: 234 ISAGYETTVNVIDQAVHTLLTRPDQL------------------ALVRKGEVTWADVVEE 275
Query: 362 ALRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPEYYPDPEKFDPERFS 421
LR P++ L T+ G I A + P+++ D + FD R
Sbjct: 276 TLRHEPAVKHLPLRYAVTDIALPDGRTIARGEPILASYAAANRHPDWHEDADTFDATRTV 335
Query: 422 PENIESRPHYTYLPFGDGPRNCIGK 446
E +L FG G C+G
Sbjct: 336 KE---------HLAFGHGVHFCLGA 351
>d1n97a_ a.104.1.1 (A:) Cyp175a1 {Thermus thermophilus [TaxId: 274]}
Length = 385
Score = 89.1 bits (219), Expect = 6e-20
Identities = 64/377 (16%), Positives = 111/377 (29%), Gaps = 76/377 (20%)
Query: 73 MTPKLMVTDPELYKYILIKDFDHFVDRGMGELDAKRDPIAGH-LFLSKGEYWKRLRNKLS 131
P ++ DPE + L+ + L + G L GE WK R L
Sbjct: 40 RFPLALIFDPEGVEGALLAEGTTKATFQYRALS----RLTGRGLLTDWGESWKEARKALK 95
Query: 132 PTFTSGKIKYMFPLIKKCSDQLITTIRKQIGESKQMSLEVKDYCARYTTDVIGTTAFGIE 191
F ++ +++ R GE + ++ + ++G FG
Sbjct: 96 DPFLPKNVRGYREAMEEE-------ARAFFGEWRGEERDLDHEMLALSLRLLGRALFGKP 148
Query: 192 INSLENPDSEFRQVSLLVMKPSVLQMLKAVLSELIPLIKYLNLKIFDPRISQFFSNLVKT 251
++ P + LK D ++Q S L
Sbjct: 149 LS---------------------------------PSLAEHALKALDRIMAQTRSPLALL 175
Query: 252 NLSYREKNNIKRDDFLNIMMQLQIAQRGKTLSPDDVEMTDDVITAQSFVFFFGGYETSSS 311
+L+ + R L + + + +++ G+ET +S
Sbjct: 176 DLAAEARFRKDRGALYREAEALIVHPPLS-------HLPRERALSEAVTLLVAGHETVAS 228
Query: 312 VLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSYLDKVTKEALRMYPSLPQ 371
LT+ L+ PD Q ++ + A E ++ + L LP
Sbjct: 229 ALTWSFLLLSHRPDWQKRVAESEEAALAAFQEALRLYPPAWILTRRLERPLLLGEDRLPP 288
Query: 372 LDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPEYYPDPEKFDPERFSPENIESRPHY 431
++ ++PD E F PERF E P
Sbjct: 289 ----------------------GTTLVLSPYVTQRLHFPDGEAFRPERFLEER--GTPSG 324
Query: 432 TYLPFGDGPRNCIGKIL 448
Y PFG G R C+G+
Sbjct: 325 RYFPFGLGQRLCLGRDF 341
>d1cpta_ a.104.1.1 (A:) Cytochrome P450-TERP {Pseudomonas sp.
[TaxId: 306]}
Length = 428
Score = 86.0 bits (211), Expect = 7e-19
Identities = 52/371 (14%), Positives = 99/371 (26%), Gaps = 55/371 (14%)
Query: 80 TDPELYK--YILIKDFDHFVDRGMGELDAKRDPIAGHLFLSKGEYWKRLRNKLSPTFTSG 137
P L+ +D + M + + L R F
Sbjct: 65 KQPGLFSNAEGSEILYDQNNEAFMRSISGGCPHVIDSLTSMDPPTHTAYRGLTLNWFQPA 124
Query: 138 KIKYMFPLIKKCSDQLITTIRKQIGESKQMSLEVKDYCARYTTDVIGTTAFGIEINSLEN 197
I+ + I++ + + + GE M D Y V+ T E +
Sbjct: 125 SIRKLEENIRRIAQASVQRLLDFDGECDFM----TDCALYYPLHVVMTALGVPEDDEPLM 180
Query: 198 PDSEFRQVSLLVMKPSVLQMLKAVLSELIPLIKYLNLKIFDPRISQFFSNLVKTNLSYRE 257
+ + + ++ F + T Y
Sbjct: 181 LKLTQDFFGVHEPDEQAV----------------AAPRQSADEAARRFHETIATFYDYFN 224
Query: 258 KNNIKRDDFLNIMMQLQIAQRGKTLSPDDVEMTDDVITAQSFVFFFGGYETSSSVLTFCL 317
+ R + +A D + D I A G++T+SS +
Sbjct: 225 GFTVDRRSCPKDDVMSLLANS----KLDGNYIDDKYINAYYVAIATAGHDTTSSSSGGAI 280
Query: 318 YELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSYLDKVTKEALRMYPSLPQLDRISV 377
L+RNP+ + L + + + P +
Sbjct: 281 IGLSRNPEQLAL-------------------AKSDPALIPRLVDEAVRWTA-PVKSFMRT 320
Query: 378 KKYKLPNTDLTLDVGTKISIPTFAIHYDPEYYPDPEKFDPERFSPENIESRPHYTYLPFG 437
+ G +I + + + D E + +P++FD RF +L FG
Sbjct: 321 ALADTEVRGQNIKRGDRIMLSYPSANRDEEVFSNPDEFDITRFP---------NRHLGFG 371
Query: 438 DGPRNCIGKIL 448
G C+G+ L
Sbjct: 372 WGAHMCLGQHL 382
>d2ciba1 a.104.1.1 (A:5-449) Cytochrome p450 14 alpha-sterol
demethylase (cyp51) {Mycobacterium tuberculosis [TaxId:
1773]}
Length = 445
Score = 85.3 bits (209), Expect = 1e-18
Identities = 57/378 (15%), Positives = 122/378 (32%), Gaps = 25/378 (6%)
Query: 72 MMTPKLMVTDPELYKYILIKDFDHFVDRGMGELDAKRDPIAGHLFLSKGEYWKRLRNKLS 131
++++ ++ D PI G + +R +
Sbjct: 42 AGKQVVLLSGSHANEFFFRAGDDDLDQAKAYPF---MTPIFGEGVVFDASPERRKEMLHN 98
Query: 132 PTFTSGKIKYMFPLIKKCSDQLITTIRKQIGESKQMSLEVKDYCARYTTDVIGTTAFGIE 191
++K I+ R + +++ D+ A T G +
Sbjct: 99 AALRGEQMKGHAATIEDQVR------RMIADWGEAGEIDLLDFFAELTIYTSSACLIGKK 152
Query: 192 INSLENPDSEFRQVSLLVMKPSVLQMLKAVLSELIPLIKYLNLKIFDPRISQFFSNLVKT 251
+ L + + +P+ + + ++++
Sbjct: 153 FRDQLDGRFAKLYHELERGTDPLAYVDP-----YLPIESFRRRDEARNGLVALVADIMNG 207
Query: 252 NLSYREKNNIKRDDFLNIMMQLQIAQRGKTLSPDDVEMTDDVITAQSFVFFFGGYETSSS 311
++ + RD ++ + D IT F G+ TSS
Sbjct: 208 RIANPPTDKSDRDMLDVLIAVKAE--------TGTPRFSADEITGMFISMMFAGHHTSSG 259
Query: 312 VLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSYLDKVTKEALRMYPSLPQ 371
++ L EL R+ D + + E+ +++ ++ L+ V KE LR++P L
Sbjct: 260 TASWTLIELMRHRDAYAAVIDELDELYGDGRSVSFHALRQIPQLENVLKETLRLHPPLII 319
Query: 372 LDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPEYYPDPEKFDPERF-SPENIESRPH 430
L R++ ++++ + S + PE +PDP F P R+ P +
Sbjct: 320 LMRVAKGEFEVQGHRIHEGDLVAASPAIS--NRIPEDFPDPHDFVPARYEQPRQEDLLNR 377
Query: 431 YTYLPFGDGPRNCIGKIL 448
+T++PFG G C+G
Sbjct: 378 WTWIPFGAGRHRCVGAAF 395
>d1jfba_ a.104.1.1 (A:) Cytochrome P450-NOR, nitric reductase
{Fungus (Fusarium oxysporum) [TaxId: 5507]}
Length = 399
Score = 83.7 bits (205), Expect = 3e-18
Identities = 59/377 (15%), Positives = 121/377 (32%), Gaps = 69/377 (18%)
Query: 78 MVTDPELYKYILIKDFDHFVDR---GMGELDAKRDPIAGH---LFLSKGEYWKRLRNKLS 131
+VT + ++ R G EL A A R+ +
Sbjct: 40 LVTKHKDVCFVA-TSEKLSKVRTRQGFPELSASGKQAAKAKPTFVDMDPPEHMHQRSMVE 98
Query: 132 PTFTSGKIKYMFPLIKKCSDQLITTIRKQIGESKQMSLEVKDYCARYTTDVIGTTAFGIE 191
PTFT +K + P I++ D L+ ++++ + + ++ A I T G+
Sbjct: 99 PTFTPEAVKNLQPYIQRTVDDLLEQMKQKGCANGPV--DLVKEFALPVPSYIIYTLLGVP 156
Query: 192 INSLENPDSEFRQVSLLVMKPSVLQMLKAVLSELIPLIKYLNLKIFDPRISQFFSNLVKT 251
N + + +Q ++ S + A EL+ + L
Sbjct: 157 FN---DLEYLTQQNAIRTNGSSTAREASAANQELLDYLAIL------------------- 194
Query: 252 NLSYREKNNIKRDDFLNIMMQLQIAQRGKTLSPDDVEMTDDVITAQSFVFFFGGYETSSS 311
++ +DD ++ + Q+ + +F+ G T +
Sbjct: 195 ---VEQRLVEPKDDIISKLCTEQVKPG---------NIDKSDAVQIAFLLLVAGNATMVN 242
Query: 312 VLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSYLDKVTKEALRMYPSLPQ 371
++ + LA++PD ++L+ + EL + + KE + + L +
Sbjct: 243 MIALGVATLAQHPDQLAQLKANPSLAPQFVEELCRYHTASALAIKRTAKEDVMIGDKLVR 302
Query: 372 LDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPEYYPDPEKFDPERFSPENIESRPHY 431
+ I + + D E + +P++F+ R P
Sbjct: 303 AN-------------------EGIIASNQSANRDEEVFENPDEFNMNRKWPPQ------- 336
Query: 432 TYLPFGDGPRNCIGKIL 448
L FG G CI + L
Sbjct: 337 DPLGFGFGDHRCIAEHL 353
>d1lfka_ a.104.1.1 (A:) p450 monoxygenase OxyB {Amycolatopsis
orientalis [TaxId: 31958]}
Length = 394
Score = 82.5 bits (202), Expect = 8e-18
Identities = 57/401 (14%), Positives = 121/401 (30%), Gaps = 78/401 (19%)
Query: 56 LSELIPVIKYLNLKEAMMTPKLMVTDPELYKYILIKDFDHFVDRG--------MGELDAK 107
L + + A M T + + ++ D F R G+ +
Sbjct: 18 LLAAGALTRVTIGSGADAETHWMATAHAVVRQVM-GDHQQFSTRRRWDPRDEIGGKGIFR 76
Query: 108 RDPIAGHLFLSKGEYWKRLRNKLSPTFTSGKIKYMFPLIKKCSDQLITTIRKQIGESKQM 167
+ G+L RLR KL+P FT K++ M P I++ + + + +
Sbjct: 77 PRELVGNLMDYDPPEHTRLRRKLTPGFTLRKMQRMAPYIEQIVNDRLDEMERA-----GS 131
Query: 168 SLEVKDYCARYTTDVIGTTAFGIEINSLENPDSEFRQVSLLVMKPSVLQMLKAVLSELIP 227
++ + A + G+ + F ++ + S+ Q +A L +
Sbjct: 132 PADLIAFVADKVPGAVLCELVGVP----RDDRDMFMKLCHGHLDASLSQKRRAALGD--- 184
Query: 228 LIKYLNLKIFDPRISQFFSNLVKTNLSYREKNNIKRDDFLNIMMQLQIAQRGKTLSPDDV 287
+ S++ ++ + I
Sbjct: 185 ------------KFSRYLLAMIARERKEPGEGMIGAVVAEYGDD---------------- 216
Query: 288 EMTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYE 347
TD+ + G + S ++ + + R+P+ R + + ++ EL
Sbjct: 217 -ATDEELRGFCVQVMLAGDDNISGMIGLGVLAMLRHPEQIDAFRGDEQSAQRAVDELIRY 275
Query: 348 ICHKMSYLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPE 407
+ S ++ +E L + + G + A + DP
Sbjct: 276 LTVPYSPTPRIAREDLTLA-------------------GQEIKKGDSVICSLPAANRDPA 316
Query: 408 YYPDPEKFDPERFSPENIESRPHYTYLPFGDGPRNCIGKIL 448
PD ++ D R ++ FG G +C+G L
Sbjct: 317 LAPDVDRLDVT---------REPIPHVAFGHGVHHCLGAAL 348
>d1z8oa1 a.104.1.1 (A:3-404) Cytochrome P450-ERYF {Saccharopolyspora
erythraea [TaxId: 1836]}
Length = 402
Score = 77.2 bits (188), Expect = 6e-16
Identities = 65/384 (16%), Positives = 127/384 (33%), Gaps = 81/384 (21%)
Query: 78 MVTDPELYKYILIKDFDHFVDR-------------GMGELDAKRDPIAGHLFLSKGEYWK 124
+VT + K L D D +G + R+ A ++ S
Sbjct: 39 LVTGYDEAKAAL-SDLRLSSDPKKKYPGVEVEFPAYLGFPEDVRNYFATNMGTSDPPTHT 97
Query: 125 RLRNKLSPTFTSGKIKYMFPLIKKCSDQLITTIRKQIGESKQMSLEVKDYCARYTTDVIG 184
RLR +S FT +++ M P +++ + + ++ +
Sbjct: 98 RLRKLVSQEFTVRRVEAMRPRVEQITAE----------LLDEVGDSGVVDIVDRFAHPLP 147
Query: 185 TTAFGIEINSLENPDSEFRQVSLLVMKPSVLQMLKAVLSELIPLIKYLNLKIFDPRISQF 244
+ E EF + S + L+ + ++
Sbjct: 148 IKVICELLGVDEKYRGEFGRWSSEI------------------LVMDPERAEQRGQAARE 189
Query: 245 FSNLVKTNLSYREKNNIKRDDFLNIMMQLQIAQRGKTLSPDDVEMTDDVITAQSFVFFFG 304
N + + R DD L+ ++++Q DD ++ D +T+ + V
Sbjct: 190 VVNFILDLVERRRTE--PGDDLLSALIRVQ--------DDDDGRLSADELTSIALVLLLA 239
Query: 305 GYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSYLDKVTKEALR 364
G+E S S++ Y L +PD + +R++ A E+ I + +E
Sbjct: 240 GFEASVSLIGIGTYLLLTHPDQLALVRRDPSALPNAVEEILRYIAPPETTTRFAAEEVEI 299
Query: 365 MYPSLPQLDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPEYYPDPEKFDPERFSPEN 424
++PQ + + + A + DP+ +PDP +FD R +
Sbjct: 300 GGVAIPQ--------------------YSTVLVANGAANRDPKQFPDPHRFDVTRDT--- 336
Query: 425 IESRPHYTYLPFGDGPRNCIGKIL 448
+L FG G C+G+ L
Sbjct: 337 ------RGHLSFGQGIHFCMGRPL 354
>d1q5da_ a.104.1.1 (A:) Cytochrome P450epok {Sorangium cellulosum
[TaxId: 56]}
Length = 401
Score = 74.9 bits (182), Expect = 3e-15
Identities = 52/379 (13%), Positives = 102/379 (26%), Gaps = 67/379 (17%)
Query: 78 MVTDPELYKYILIKDFDHFVDRGMGELDAK--------RDPIAGHLFLSKGEYWKRLRNK 129
++T + +D V R E A+ D LF E R+R
Sbjct: 36 VLTRYHDVSAVF-RDERFAVSREEWESSAEYSSAIPELSDMKKYGLFGLPPEDHARVRKL 94
Query: 130 LSPTFTSGKIKYMFPLIKKCSDQLITTIRKQIGESKQMSLEVKDYCARYTTDVIGTTAFG 189
++P+FTS I + I++ DQL+ Q +
Sbjct: 95 VNPSFTSRAIDLLRAEIQRTVDQLLDARSGQEEFDVVRDYAEGIPMRAISA--------- 145
Query: 190 IEINSLENPDSEFRQVSLLVMKPSVLQMLKAVLSELIPLIKYLNLKIFDPRISQFFSNLV 249
LL + + + S + + D +++
Sbjct: 146 -----------------LLKVPAECDEKFRRFGSATARALGVGLVPRVDEETKTLVASVT 188
Query: 250 KTNLSYREKNNIKRDDFLNIMMQLQIAQRGKTLSPDDVEMTDDVITAQSFVFFFGGYETS 309
+ + +R + L + + Q D ++ + A G +T+
Sbjct: 189 EGLALLHGVLDERRRNPLENDVLTMLLQA----EADGSRLSTKELVALVGAIIAAGTDTT 244
Query: 310 SSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSYLDKVTKEALRMYPSL 369
++ F + L R+P+ ++ E + E+
Sbjct: 245 IYLIAFAVLNLLRSPEALELVKAEPGLMRNALDEVLRFDNILR-----------IGTVRF 293
Query: 370 PQLDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPEYYPDPEKFDPERFSPENIESRP 429
+ D + + + D + P+ FD R +
Sbjct: 294 ARQDLEYCGASIKKGE--------MVFLLIPSALRDGTVFSRPDVFDVRRDT-------- 337
Query: 430 HYTYLPFGDGPRNCIGKIL 448
L +G GP C G L
Sbjct: 338 -SASLAYGRGPHVCPGVSL 355
>d1gwia_ a.104.1.1 (A:) Cyp154c1 monooxygenase {Streptomyces
coelicolor [TaxId: 1902]}
Length = 403
Score = 71.8 bits (174), Expect = 3e-14
Identities = 52/370 (14%), Positives = 105/370 (28%), Gaps = 67/370 (18%)
Query: 80 TDPELYKYILIKDFDHFVDRGMGELDAKRDPIAGHLFLSKGEYWKRLRNKLSPTFTSGKI 139
TDP L K I + + + G +RLR ++ T ++
Sbjct: 50 TDPRLVKDINVWGAWRRGEIPADWPLIGLANPGRSMLTVDGAEHRRLRTLVAQALTVRRV 109
Query: 140 KYMFPLIKKCSDQLITTIRKQIGESKQMSLEVKDYCARYTTDVIGTTAFGIEINSLENPD 199
++M I + +D+L+ + G A + GIE L
Sbjct: 110 EHMRGRITELTDRLLDELPADGGVVDLK-----AAFAYPLPMYVVADLMGIEEARLPRLK 164
Query: 200 SEFRQVSLLVMKPSVLQMLKAVLSELIPLIKYLNLKIFDPRISQFFSNLVKTNLSYREKN 259
F + + + + A L+EL I ++ + S +
Sbjct: 165 VLFEKF---FSTQTPPEEVVATLTELAS--------IMTDTVAAKRAAPGDDLTSALIQA 213
Query: 260 NIKRDDFLNIMMQLQIAQRGKTLSPDDVEMTDDVITAQSFVFFFGGYETSSSVLTFCLYE 319
+ D + + + + G+ET+ S++ +
Sbjct: 214 SENGDHLTDAEIVSTL-----------------------QLMVAAGHETTISLIVNAVVN 250
Query: 320 LARNPDIQSKLRQEIMATKKKEGELTYEICHKMSYLDKVTKEALRMYPSLPQLDRISVKK 379
L+ +P+ ++ + E L + E + + +
Sbjct: 251 LSTHPEQRALVLSGEAEWSAVVEETLRFSTPTSHVLIRFAAEDV-------PVGDRVIPA 303
Query: 380 YKLPNTDLTLDVGTKISIPTFAIHYDPEYY-PDPEKFDPERFSPENIESRPHYTYLPFGD 438
+ + A+ D + P ++FD R S ++ FG
Sbjct: 304 G------------DALIVSYGALGRDERAHGPTADRFDLTRTSG--------NRHISFGH 343
Query: 439 GPRNCIGKIL 448
GP C G L
Sbjct: 344 GPHVCPGAAL 353
>d1s1fa_ a.104.1.1 (A:) Cyp158a2 {Streptomyces coelicolor [TaxId:
1902]}
Length = 399
Score = 66.8 bits (161), Expect = 1e-12
Identities = 28/148 (18%), Positives = 50/148 (33%), Gaps = 9/148 (6%)
Query: 301 FFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSYLDKVTK 360
G E + S L + + ++ EL + + +
Sbjct: 213 AAVGRDEITLSEAVGLAVLLQIGGEAVTNNSGQMFHLLLSRPELAERLRSEPEIRPRAID 272
Query: 361 EALRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPEYYPDPEKFDPERF 420
E LR P + + + + + G + + A + DPE +PDP++ D ER
Sbjct: 273 ELLRWIPHRNAVGLSRIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDRIDFERS 332
Query: 421 SPENIESRPHYTYLPFGDGPRNCIGKIL 448
++ FG GP C G +L
Sbjct: 333 P---------NPHVSFGFGPHYCPGGML 351
>d1n40a_ a.104.1.1 (A:) Cyp121 monooxygenase (P450 Mt2)
{Mycobacterium tuberculosis [TaxId: 1773]}
Length = 395
Score = 63.3 bits (152), Expect = 2e-11
Identities = 45/374 (12%), Positives = 108/374 (28%), Gaps = 70/374 (18%)
Query: 78 MVTDPELYKYILIKDFDHFVDRGMGELDAKRDPIA---GHLFLSKGEYWKRLRNKLSPTF 134
+V+ L +L +D + + + + + LR +
Sbjct: 43 LVSSYALCTQVL-EDRRFSMKETAAAGAPRLNALTVPPEVVNNMGNIADAGLRKAVMKAI 101
Query: 135 TSGKIKYMFPLIKKCSDQLITTIRKQIGESKQMSLEVKDYCARYTTDVIGTTAFGIEINS 194
T K + ++ ++ L+ + + + D+ T + + +
Sbjct: 102 TP-KAPGLEQFLRDTANSLLDNLITEGAPADLR----NDFADPLATALHCKVLGIPQEDG 156
Query: 195 LENPDSEFRQVSLLVMKPSVLQMLKAVLSELIPLIKYLNLKIFDPRISQFFSNLVKTNLS 254
+ L + L++ + +
Sbjct: 157 PK-------------------------------LFRSLSIAFMSSADPIPAAKINWDRDI 185
Query: 255 YREKNNIKRDDFLNIMMQLQIAQRGKTLSPDDVEMTDDVITAQSFVFFFGGYETSSSVLT 314
++ + +M R P ++D++ FF G ++ S LT
Sbjct: 186 EYMAGILENPNITTGLMGELSRLRKD---PAYSHVSDELFATIGVTFFGAGVISTGSFLT 242
Query: 315 FCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSYLDKVTKEALRMYPSLPQLDR 374
L L + P +++ L ++ EL L ++ +++ L +
Sbjct: 243 TALISLIQRPQLRNLLHEKPELIPAGVEELLRINLSFADGLPRLATADIQVGDVLVRKGE 302
Query: 375 ISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPEYYPDPEKFDPERFSPENIESRPHYTYL 434
+ + ++DPE++P+P + +R +P ++L
Sbjct: 303 LVLVLL-------------------EGANFDPEHFPNPGSIELDRPNP--------TSHL 335
Query: 435 PFGDGPRNCIGKIL 448
FG G C G L
Sbjct: 336 AFGRGQHFCPGSAL 349
>d1io7a_ a.104.1.1 (A:) Cyp119 {Archaeon Sulfolobus solfataricus
[TaxId: 2287]}
Length = 366
Score = 58.7 bits (140), Expect = 5e-10
Identities = 52/381 (13%), Positives = 115/381 (30%), Gaps = 90/381 (23%)
Query: 78 MVTDPELYKYILIKDFDHFVDRGMGELDAKRD----------PIAGHLFLSKGEYWKRLR 127
V K +L +F F G + D P + S LR
Sbjct: 22 QVFSYRYTKEVL-NNFSKFSSDLTGYHERLEDLRNGKIRFDIPTRYTMLTSDPPLHDELR 80
Query: 128 NKLSPTFTSGKIKYMFPLIKKCSDQLITTIRKQIGESKQMSLEVKDYCARYTTDVIGTTA 187
+ + F+ K++ + I++ + L+ +I + + +
Sbjct: 81 SMSADIFSPQKLQTLETFIRETTRSLLDSIDPRED-----------DIVKKLAVPLPIIV 129
Query: 188 FGIEINSLENPDSEFRQVSLLVMKPSVLQMLKAVLSELIPLIKYLNLKIFDPRISQFFSN 247
+ +F++ S LV ++ P
Sbjct: 130 ISKILGLPIEDKEKFKEWSDLVA-----------------------FRLGKPGEIFELGK 166
Query: 248 LVKTNLSYREKNNIKRDDFLNIMMQLQIAQRGKTLSPDDVEMTDDVITAQSFVFFFGGYE 307
+ Y + + + ++ ++ ++D + G E
Sbjct: 167 KYLELIGYVKDHLNSGTEVVSRVVNSN--------------LSDIEKLGYIILLLIAGNE 212
Query: 308 TSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEICHKMSYLDKVTKEALRMYP 367
T++++++ + + R ++ + + K +EALR P
Sbjct: 213 TTTNLISNSVIDFTRFNL--------------------WQRIREENLYLKAIEEALRYSP 252
Query: 368 SLPQLDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPEYYPDPEKFDPERFSPENIES 427
+ + R + ++ D T++ G + + + + D E + D EKF P+R
Sbjct: 253 PVMRTVRKTKERV--KLGDQTIEEGEYVRVWIASANRDEEVFHDGEKFIPDRNP------ 304
Query: 428 RPHYTYLPFGDGPRNCIGKIL 448
+L FG G C+G L
Sbjct: 305 ---NPHLSFGSGIHLCLGAPL 322
>d1re9a_ a.104.1.1 (A:) Cytochrome P450-CAM {Pseudomonas putida
[TaxId: 303]}
Length = 404
Score = 55.9 bits (133), Expect = 4e-09
Identities = 10/47 (21%), Positives = 14/47 (29%), Gaps = 9/47 (19%)
Query: 402 IHYDPEYYPDPEKFDPERFSPENIESRPHYTYLPFGDGPRNCIGKIL 448
D P D R ++ FG G C+G+ L
Sbjct: 315 SGLDERENACPMHVDFSR---------QKVSHTTFGHGSHLCLGQHL 352
Score = 37.0 bits (84), Expect = 0.003
Identities = 11/83 (13%), Positives = 27/83 (32%), Gaps = 1/83 (1%)
Query: 78 MVTDPELYKYILIKDFDHFVDRGMGELDAKRDPIAGHLFLSKGEYWKRLRNKLSPTFTSG 137
+ T +L + +D+ HF + ++ R +
Sbjct: 54 IATRGQLIREAY-EDYRHFSSECPFIPREAGEAYDFIPTSMDPPEQRQFRALANQVVGMP 112
Query: 138 KIKYMFPLIKKCSDQLITTIRKQ 160
+ + I++ + LI ++R Q
Sbjct: 113 VVDKLENRIQELACSLIESLRPQ 135
>d1ue8a_ a.104.1.1 (A:) Cyp119 {Archaeon Sulfolobus tokodaii [TaxId:
111955]}
Length = 367
Score = 54.5 bits (129), Expect = 1e-08
Identities = 28/160 (17%), Positives = 58/160 (36%), Gaps = 32/160 (20%)
Query: 289 MTDDVITAQSFVFFFGGYETSSSVLTFCLYELARNPDIQSKLRQEIMATKKKEGELTYEI 348
+++ + G ET+++++ + +
Sbjct: 195 LSELEKEGYFILLMIAGNETTTNLIGNAIEDFTLYN---------------------SWD 233
Query: 349 CHKMSYLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLTLDVGTKISIPTFAIHYDPEY 408
+ K +EALR P + + R++ +K K+ + + D G + + + + D E
Sbjct: 234 YVREKGALKAVEEALRFSPPVMRTIRVTKEKVKIRDQVI--DEGELVRVWIASANRDEEV 291
Query: 409 YPDPEKFDPERFSPENIESRPHYTYLPFGDGPRNCIGKIL 448
+ DP+ F P+R +L FG G C+G L
Sbjct: 292 FKDPDSFIPDRT---------PNPHLSFGSGIHLCLGAPL 322
>d2pgga1 e.8.1.4 (A:31-804) Viral RNA polymerase {Avian infectious
bursal disease virus [TaxId: 10995]}
Length = 774
Score = 28.8 bits (64), Expect = 1.4
Identities = 13/52 (25%), Positives = 22/52 (42%), Gaps = 3/52 (5%)
Query: 394 KISIPTFAIHYDPEYYP--DPEKFDPERFSPE-NIESRPHYTYLPFGDGPRN 442
+S+P Y P+YYP P K P + P+ + + Y +L +
Sbjct: 66 TLSLPIGDQEYFPKYYPTHRPSKEKPNAYPPDIALLKQMIYLFLQVPEANEG 117
>d2zd1b1 e.8.1.2 (B:5-428) HIV-1 reverse transcriptase {Human
immunodeficiency virus type 1 [TaxId: 11676]}
Length = 424
Score = 27.3 bits (60), Expect = 4.2
Identities = 22/106 (20%), Positives = 32/106 (30%), Gaps = 15/106 (14%)
Query: 334 IMATKKKEGELTYEICHKMSYLDKVTKEALRMYPSLPQLDRISVKKYKLPNTDLTLDVGT 393
+ A KKK+ + L+K T++ + +P + KK LDV
Sbjct: 56 VFAIKKKDST-KWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSV-----TVLDV-- 107
Query: 394 KISIPTFAIHYDPEYYPDPEKFDPERFSPENIESRPHYTY--LPFG 437
A P + S N Y Y LP G
Sbjct: 108 -----GDAYFSVPLDEDFRKYTAFTIPSINNETPGIRYQYNVLPQG 148
>d1wfra_ d.106.1.1 (A:) Hypothetical protein TT1886 (TTHA0401)
{Thermus thermophilus [TaxId: 274]}
Length = 143
Score = 26.4 bits (58), Expect = 4.5
Identities = 11/64 (17%), Positives = 19/64 (29%)
Query: 65 YLNLKEAMMTPKLMVTDPELYKYILIKDFDHFVDRGMGELDAKRDPIAGHLFLSKGEYWK 124
L+L V +++ D + + G L+ + G L L KG
Sbjct: 59 VLDLWHGACRGAKAVEGEAEADFVIEADLATWQEVLEGRLEPLSALMRGLLELKKGTIAA 118
Query: 125 RLRN 128
Sbjct: 119 LAPY 122
>d1sr4c_ b.42.2.1 (C:) Cytolethal distending toxin subunit C
{Haemophilus ducreyi [TaxId: 730]}
Length = 154
Score = 26.0 bits (57), Expect = 7.6
Identities = 9/23 (39%), Positives = 12/23 (52%)
Query: 405 DPEYYPDPEKFDPERFSPENIES 427
DP YPD E P R S ++ +
Sbjct: 1 DPTTYPDVELSPPPRISLRSLLT 23
>d1wtea_ c.52.1.29 (A:) Restriction endonuclease EcoO109IR
{Escherichia coli [TaxId: 562]}
Length = 272
Score = 26.2 bits (57), Expect = 7.9
Identities = 32/134 (23%), Positives = 53/134 (39%), Gaps = 19/134 (14%)
Query: 68 LKEAMMTPKLMVTDPELYKYILIKDFDHFVDRGMGELDAKRDPIAGHLFLSKGE-YWKRL 126
+ E M M P ++ Y + DFD V+ IA HL + K +
Sbjct: 29 MSETMSINPFMT--PFIFDYHSLNDFDELVEA----------IIAKHLMTGHDTGFGKLI 76
Query: 127 RNKLSP-TFTSGKIKYMF-----PLIKKCSDQLITTIRKQIGESKQMSLEVKDYCARYTT 180
K+ P F + K+ + P I C D++ I++ G + +SL+ + + T
Sbjct: 77 DEKILPRVFGAYKLDKSYRAANEPFIHPCFDEIDHVIQRDDGRIELLSLKAGKWTIQLTM 136
Query: 181 DVIGTTAFGIEINS 194
V AF IN+
Sbjct: 137 AVQLNKAFHEIINN 150
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.320 0.138 0.396
Gapped
Lambda K H
0.267 0.0393 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,725,088
Number of extensions: 84845
Number of successful extensions: 249
Number of sequences better than 10.0: 1
Number of HSP's gapped: 212
Number of HSP's successfully gapped: 39
Length of query: 448
Length of database: 2,407,596
Length adjustment: 88
Effective length of query: 360
Effective length of database: 1,199,356
Effective search space: 431768160
Effective search space used: 431768160
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 54 (25.5 bits)