BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy2450
(254 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|A4IGK4|RBM5_XENTR RNA-binding protein 5 OS=Xenopus tropicalis GN=rbm5 PE=2 SV=1
Length = 838
Score = 185 bits (469), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 110/281 (39%), Positives = 160/281 (56%), Gaps = 34/281 (12%)
Query: 1 MEKWAKTLNHRKEISKVANNTEQAASESPSQSTQGSADVCFSV----------------- 43
ME+WAK+LN +KE K N+ + ++ + +AD F++
Sbjct: 565 MERWAKSLNKQKENFK--NSFQPLSARDEERKESAAADAGFALFEKKQGALLERQFMPDM 622
Query: 44 ---VGNNREEKT-KKSLVAAYESDEEPEVQEETVSG--EEKQQIDWDKLACLICKRQFNS 97
V EEK K+LVAAY D + E + E + G +E++ +DW KLACL+C+RQF +
Sbjct: 623 MMMVNTEEEEKPPNKALVAAYSGDSDNEEESERLLGAVDEEKLLDWKKLACLLCRRQFPN 682
Query: 98 KDILKKHTQLSELHKSNLKMWYTCR----NLDPNDAVHRAVQYRDRAKERRLKYGEPEVP 153
KD L +H QLS+LHK NL+++ + L+ + R +YRDRA ERR KYG PE P
Sbjct: 683 KDALTRHQQLSDLHKQNLEVYRRSKMSEQELEALELKEREAKYRDRAAERREKYGIPE-P 741
Query: 154 PACKLKAKYSKVKEATVTFEEPTKKGIGADNVGNKLLQKMGWTQGQGLGKTNQGRTSIIE 213
P K K + V +E+PTK GI N+GNK+LQ MGW +G GLG+ +QG T+ I+
Sbjct: 742 PEPKRK----RFDPTVVNYEQPTKDGIDNSNIGNKMLQAMGWKEGSGLGRKSQGITAPIQ 797
Query: 214 AEARISSAGLGTNAIGMTPAPGETYKDCVKKMMRARYSQID 254
A+ R+ AGLG ++YKD V+K M AR+S+++
Sbjct: 798 AQVRMRGAGLGAKGSSYGVNTSDSYKDAVRKAMFARFSEME 838
>sp|P52756|RBM5_HUMAN RNA-binding protein 5 OS=Homo sapiens GN=RBM5 PE=1 SV=2
Length = 815
Score = 184 bits (467), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 117/280 (41%), Positives = 165/280 (58%), Gaps = 34/280 (12%)
Query: 1 MEKWAKTLNHRKEISKVANNTEQAASESPSQSTQGSADVCFSV----------------- 43
ME+WAK+LN +KE K + + E + + +AD F++
Sbjct: 544 MERWAKSLNKQKENFKNSFQPVNSLREEERRES-AAADAGFALFEKKGALAERQQLIPEL 602
Query: 44 VGNNREEK-TKKSLVAAY--ESDEEPEVQEETVSGEEKQQIDWDKLACLICKRQFNSKDI 100
V N EE K+ LVAAY +SD E E+ E S EEK DW K+ACL+C+RQF +KD
Sbjct: 603 VRNGDEENPLKRGLVAAYSGDSDNEEELVERLESEEEKL-ADWKKMACLLCRRQFPNKDA 661
Query: 101 LKKHTQLSELHKSNLKMWYTCR----NLDPNDAVHRAVQYRDRAKERRLKYGEPEVPPAC 156
L +H QLS+LHK N+ ++ R L+ + R ++YRDRA ERR KYG PE PP
Sbjct: 662 LVRHQQLSDLHKQNMDIYRRSRLSEQELEALELREREMKYRDRAAERREKYGIPE-PPEP 720
Query: 157 KLKAKYSKVKEATVTFEEPTKKGIGADNVGNKLLQKMGWTQGQGLGKTNQGRTSIIEAEA 216
K K ++ TV +E+PTK GI N+GNK+LQ MGW +G GLG+ QG T+ IEA+
Sbjct: 721 KRKKQFDA---GTVNYEQPTKDGIDHSNIGNKMLQAMGWREGSGLGRKCQGITAPIEAQV 777
Query: 217 RISSAGLGT--NAIGMTPAPGETYKDCVKKMMRARYSQID 254
R+ AGLG +A G++ A ++YKD V+K M AR+++++
Sbjct: 778 RLKGAGLGAKGSAYGLSGA--DSYKDAVRKAMFARFTEME 815
>sp|B2GV05|RBM5_RAT RNA-binding protein 5 OS=Rattus norvegicus GN=Rbm5 PE=2 SV=1
Length = 815
Score = 183 bits (465), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 116/280 (41%), Positives = 165/280 (58%), Gaps = 34/280 (12%)
Query: 1 MEKWAKTLNHRKEISKVANNTEQAASESPSQSTQGSADVCFSV----------------- 43
ME+WAK+LN +KE K + + E + + +AD F++
Sbjct: 544 MERWAKSLNKQKENFKNSFQPVNSLREEERRES-AAADAGFALFEKKGALAERQQLIPEL 602
Query: 44 VGNNREEK-TKKSLVAAY--ESDEEPEVQEETVSGEEKQQIDWDKLACLICKRQFNSKDI 100
V N EE K+ LVAAY +SD E E+ E S EEK DW K+ACL+C+RQF ++D
Sbjct: 603 VRNGDEENPLKRGLVAAYSGDSDNEEELVERLESEEEKL-ADWKKMACLLCRRQFPNRDA 661
Query: 101 LKKHTQLSELHKSNLKMWYTCR----NLDPNDAVHRAVQYRDRAKERRLKYGEPEVPPAC 156
L +H QLS+LHK N+ ++ R L+ + R ++YRDRA ERR KYG PE PP
Sbjct: 662 LVRHQQLSDLHKQNMDIYRRSRLSEQELEALELREREMKYRDRAAERREKYGIPE-PPEP 720
Query: 157 KLKAKYSKVKEATVTFEEPTKKGIGADNVGNKLLQKMGWTQGQGLGKTNQGRTSIIEAEA 216
K K ++ TV +E+PTK GI N+GNK+LQ MGW +G GLG+ QG T+ IEA+
Sbjct: 721 KRKKQFDA---GTVNYEQPTKDGIDHSNIGNKMLQAMGWREGSGLGRKCQGITAPIEAQV 777
Query: 217 RISSAGLGT--NAIGMTPAPGETYKDCVKKMMRARYSQID 254
R+ AGLG +A G++ A ++YKD V+K M AR+++++
Sbjct: 778 RLKGAGLGAKGSAYGLSGA--DSYKDAVRKAMFARFTEME 815
>sp|Q91YE7|RBM5_MOUSE RNA-binding protein 5 OS=Mus musculus GN=Rbm5 PE=1 SV=1
Length = 815
Score = 183 bits (465), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 116/280 (41%), Positives = 165/280 (58%), Gaps = 34/280 (12%)
Query: 1 MEKWAKTLNHRKEISKVANNTEQAASESPSQSTQGSADVCFSV----------------- 43
ME+WAK+LN +KE K + + E + + +AD F++
Sbjct: 544 MERWAKSLNKQKENFKNSFQPVNSLREEERRES-AAADAGFALFEKKGALAERQQLLPEL 602
Query: 44 VGNNREEK-TKKSLVAAY--ESDEEPEVQEETVSGEEKQQIDWDKLACLICKRQFNSKDI 100
V N EE K+ LVAAY +SD E E+ E S EEK DW K+ACL+C+RQF ++D
Sbjct: 603 VRNGDEENPLKRGLVAAYSGDSDNEEELVERLESEEEKL-ADWKKMACLLCRRQFPNRDA 661
Query: 101 LKKHTQLSELHKSNLKMWYTCR----NLDPNDAVHRAVQYRDRAKERRLKYGEPEVPPAC 156
L +H QLS+LHK N+ ++ R L+ + R ++YRDRA ERR KYG PE PP
Sbjct: 662 LVRHQQLSDLHKQNMDIYRRSRLSEQELEALELREREMKYRDRAAERREKYGIPE-PPEP 720
Query: 157 KLKAKYSKVKEATVTFEEPTKKGIGADNVGNKLLQKMGWTQGQGLGKTNQGRTSIIEAEA 216
K K ++ TV +E+PTK GI N+GNK+LQ MGW +G GLG+ QG T+ IEA+
Sbjct: 721 KRKKQFDA---GTVNYEQPTKDGIDHSNIGNKMLQAMGWREGSGLGRKCQGITAPIEAQV 777
Query: 217 RISSAGLGT--NAIGMTPAPGETYKDCVKKMMRARYSQID 254
R+ AGLG +A G++ A ++YKD V+K M AR+++++
Sbjct: 778 RLKGAGLGAKGSAYGLSGA--DSYKDAVRKAMFARFTEME 815
>sp|Q1RMU5|RBM5_BOVIN RNA-binding protein 5 OS=Bos taurus GN=RBM5 PE=2 SV=1
Length = 815
Score = 183 bits (464), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 116/280 (41%), Positives = 165/280 (58%), Gaps = 34/280 (12%)
Query: 1 MEKWAKTLNHRKEISKVANNTEQAASESPSQSTQGSADVCFSV----------------- 43
ME+WAK+LN +KE K + + E + + +AD F++
Sbjct: 544 MERWAKSLNKQKENFKNSFQPVNSLREEERRES-AAADAGFALFEKKGALAERQQLIPEL 602
Query: 44 VGNNREEK-TKKSLVAAY--ESDEEPEVQEETVSGEEKQQIDWDKLACLICKRQFNSKDI 100
V N E+ K+ LVAAY +SD E E+ E S EEK DW K+ACL+C+RQF +KD
Sbjct: 603 VRNGDEDNPLKRGLVAAYSGDSDNEEELVERLESEEEKL-ADWKKMACLLCRRQFPNKDA 661
Query: 101 LKKHTQLSELHKSNLKMWYTCR----NLDPNDAVHRAVQYRDRAKERRLKYGEPEVPPAC 156
L +H QLS+LHK N+ ++ R L+ + R ++YRDRA ERR KYG PE PP
Sbjct: 662 LVRHQQLSDLHKQNMDIYRRSRLSEQELEALELREREMKYRDRAAERREKYGIPE-PPEP 720
Query: 157 KLKAKYSKVKEATVTFEEPTKKGIGADNVGNKLLQKMGWTQGQGLGKTNQGRTSIIEAEA 216
K K ++ TV +E+PTK GI N+GNK+LQ MGW +G GLG+ QG T+ IEA+
Sbjct: 721 KRKKQFDA---GTVNYEQPTKDGIDHSNIGNKMLQAMGWREGSGLGRKCQGITAPIEAQV 777
Query: 217 RISSAGLGT--NAIGMTPAPGETYKDCVKKMMRARYSQID 254
R+ AGLG +A G++ A ++YKD V+K M AR+++++
Sbjct: 778 RLKGAGLGAKGSAYGLSGA--DSYKDAVRKAMFARFTEME 815
>sp|A0JMV4|RBM5A_XENLA RNA-binding protein 5-A OS=Xenopus laevis GN=rbm5-a PE=2 SV=1
Length = 833
Score = 179 bits (453), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 109/279 (39%), Positives = 159/279 (56%), Gaps = 34/279 (12%)
Query: 1 MEKWAKTLNHRKEISKVANNTEQAASESPSQSTQGSADVCFSV----------------- 43
ME+WAK+LN +KE K N+ + E +S +AD F++
Sbjct: 564 MERWAKSLNKQKENFK--NSFQPLRDEERKES--AAADAGFALFEKKQGSLLERQFLPDM 619
Query: 44 --VGNNREEKTKKS-LVAAYESDEEPEVQEETVSG--EEKQQIDWDKLACLICKRQFNSK 98
+ N EEK + LVAAY D + E + E G ++++ +DW KLACL+C+RQF +K
Sbjct: 620 MMMVNTEEEKPPNTALVAAYSGDSDNEEENERFIGAVDDEKLMDWKKLACLLCRRQFPNK 679
Query: 99 DILKKHTQLSELHKSNLKMWYTCRNLDPN---DAVHRAVQYRDRAKERRLKYGEPEVPPA 155
D L +H QLS+LHK NL+++ + + + R +YRDRA ERR+KYG PE PP
Sbjct: 680 DALTRHQQLSDLHKQNLEVYRRSKLSEQEYEAEQTERESKYRDRAAERRVKYGIPE-PPE 738
Query: 156 CKLKAKYSKVKEATVTFEEPTKKGIGADNVGNKLLQKMGWTQGQGLGKTNQGRTSIIEAE 215
K K + V +E+PTK GI N+GNK+LQ MGW +G GLG+ +QG T+ I+A+
Sbjct: 739 PKRK----RFAPTVVNYEQPTKDGIDNSNIGNKMLQAMGWKEGSGLGRKSQGITAPIQAQ 794
Query: 216 ARISSAGLGTNAIGMTPAPGETYKDCVKKMMRARYSQID 254
R+ AGLG ++YKD V+K M AR+S+++
Sbjct: 795 VRMRGAGLGAKGSSYGVNTSDSYKDAVRKAMFARFSEME 833
>sp|Q99KG3|RBM10_MOUSE RNA-binding protein 10 OS=Mus musculus GN=Rbm10 PE=1 SV=1
Length = 930
Score = 169 bits (428), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 105/280 (37%), Positives = 156/280 (55%), Gaps = 34/280 (12%)
Query: 1 MEKWAKTLNHRKEISKVANNTEQAASESPSQSTQGSADVCFSVV---------------- 44
ME+WA++LN +KE K + A + + + +AD ++++
Sbjct: 655 MERWARSLNKQKENFKNSFQPISALRDDERRES-ATADAGYAILEKKGALAERQHTSMDL 713
Query: 45 ---GNNREEKTKKSLVAAY--ESDEEPEVQEETVSGEEKQQIDWDKLACLICKRQFNSKD 99
++ + LVAAY ESD E E QE E++ DW KLACL+C+RQF SK+
Sbjct: 714 PKLASDDRPSPPRGLVAAYSGESDSE-EEQERGGPEREEKLTDWQKLACLLCRRQFPSKE 772
Query: 100 ILKKHTQLSELHKSNLKMW---YTCRN----LDPNDAVHRAVQYRDRAKERRLKYGEPEV 152
L +H QLS LHK NL++ + N L+ ND ++YRDRA ERR KYG PE
Sbjct: 773 ALIRHQQLSGLHKQNLEIHRRAHLSENELEALEKNDMEQ--MKYRDRAAERREKYGIPE- 829
Query: 153 PPACKLKAKYSKVKEATVTFEEPTKKGIGADNVGNKLLQKMGWTQGQGLGKTNQGRTSII 212
PP K + KY + A+V FE+PT+ G+G+DN+G+++LQ MGW +G GLG+ QG + I
Sbjct: 830 PPEPK-RRKYGGISTASVDFEQPTRDGLGSDNIGSRMLQAMGWKEGSGLGRKKQGIVTPI 888
Query: 213 EAEARISSAGLGTNAIGMTPAPGETYKDCVKKMMRARYSQ 252
EA+ R+ +GLG E+YK+ + K M R+++
Sbjct: 889 EAQTRVRGSGLGARGSSYGVTSTESYKETLHKTMVTRFNE 928
>sp|P70501|RBM10_RAT RNA-binding protein 10 OS=Rattus norvegicus GN=Rbm10 PE=2 SV=1
Length = 852
Score = 169 bits (427), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 105/280 (37%), Positives = 156/280 (55%), Gaps = 34/280 (12%)
Query: 1 MEKWAKTLNHRKEISKVANNTEQAASESPSQSTQGSADVCFSVV---------------- 44
ME+WA++LN +KE K + A + + + +AD ++++
Sbjct: 577 MERWARSLNKQKENFKNSFQPISALRDDERRES-ATADAGYAILEKKGALAERQHTSMDL 635
Query: 45 ---GNNREEKTKKSLVAAY--ESDEEPEVQEETVSGEEKQQIDWDKLACLICKRQFNSKD 99
++ + LVAAY ESD E E QE E++ DW KLACL+C+RQF SK+
Sbjct: 636 PKLASDDRPSPPRGLVAAYSGESDSE-EEQERGGPEREEKLTDWQKLACLLCRRQFPSKE 694
Query: 100 ILKKHTQLSELHKSNLKMW---YTCRN----LDPNDAVHRAVQYRDRAKERRLKYGEPEV 152
L +H QLS LHK NL++ + N L+ ND ++YRDRA ERR KYG PE
Sbjct: 695 ALIRHQQLSGLHKQNLEIHRRAHLSENELEALEKNDM--EQMKYRDRAAERREKYGIPE- 751
Query: 153 PPACKLKAKYSKVKEATVTFEEPTKKGIGADNVGNKLLQKMGWTQGQGLGKTNQGRTSII 212
PP K + KY + A+V FE+PT+ G+G+DN+G+++LQ MGW +G GLG+ QG + I
Sbjct: 752 PPEPK-RRKYGGISTASVDFEQPTRDGLGSDNIGSRMLQAMGWKEGSGLGRKKQGIVTPI 810
Query: 213 EAEARISSAGLGTNAIGMTPAPGETYKDCVKKMMRARYSQ 252
EA+ R+ +GLG E+YK+ + K M R+++
Sbjct: 811 EAQTRVRGSGLGARGSSYGVTSTESYKETLHKTMVTRFNE 850
>sp|P98175|RBM10_HUMAN RNA-binding protein 10 OS=Homo sapiens GN=RBM10 PE=1 SV=3
Length = 930
Score = 169 bits (427), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 107/282 (37%), Positives = 156/282 (55%), Gaps = 38/282 (13%)
Query: 1 MEKWAKTLNHRKEISKVANNTEQAASE--SPSQSTQGSADVCFSVV-------------- 44
ME+WA++LN +KE K N+ Q S + +AD ++++
Sbjct: 655 MERWARSLNKQKENFK---NSFQPISSLRDDERRESATADAGYAILEKKGALAERQHTSM 711
Query: 45 -----GNNREEKTKKSLVAAY--ESDEEPEVQEETVSGEEKQQIDWDKLACLICKRQFNS 97
++ + LVAAY ESD E E QE E++ DW KLACL+C+RQF S
Sbjct: 712 DLPKLASDDRPSPPRGLVAAYSGESDSE-EEQERGGPEREEKLTDWQKLACLLCRRQFPS 770
Query: 98 KDILKKHTQLSELHKSNLKMW---YTCRN----LDPNDAVHRAVQYRDRAKERRLKYGEP 150
K+ L +H QLS LHK NL++ + N L+ ND ++YRDRA ERR KYG P
Sbjct: 771 KEALIRHQQLSGLHKQNLEIHRRAHLSENELEALEKNDM--EQMKYRDRAAERREKYGIP 828
Query: 151 EVPPACKLKAKYSKVKEATVTFEEPTKKGIGADNVGNKLLQKMGWTQGQGLGKTNQGRTS 210
E PP K + KY + A+V FE+PT+ G+G+DN+G+++LQ MGW +G GLG+ QG +
Sbjct: 829 E-PPEPK-RRKYGGISTASVDFEQPTRDGLGSDNIGSRMLQAMGWKEGSGLGRKKQGIVT 886
Query: 211 IIEAEARISSAGLGTNAIGMTPAPGETYKDCVKKMMRARYSQ 252
IEA+ R+ +GLG E+YK+ + K M R+++
Sbjct: 887 PIEAQTRVRGSGLGARGSSYGVTSTESYKETLHKTMVTRFNE 928
>sp|Q6DDU9|RBM5B_XENLA RNA-binding protein 5-B OS=Xenopus laevis GN=rbm5-b PE=2 SV=1
Length = 749
Score = 111 bits (277), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 57/121 (47%), Positives = 76/121 (62%), Gaps = 5/121 (4%)
Query: 134 VQYRDRAKERRLKYGEPEVPPACKLKAKYSKVKEATVTFEEPTKKGIGADNVGNKLLQKM 193
+YRDRA ERR KYG PE PP K K + V +E+PTK GI N+GNK+LQ M
Sbjct: 634 AKYRDRAAERREKYGIPE-PPEPKRK----RFDPTVVNYEQPTKDGIDNSNIGNKMLQAM 688
Query: 194 GWTQGQGLGKTNQGRTSIIEAEARISSAGLGTNAIGMTPAPGETYKDCVKKMMRARYSQI 253
GW +G GLG+ +QG T+ I+A+ R+ AGLG ++YKD VKK M AR+S++
Sbjct: 689 GWKEGSGLGRKSQGITAPIQAQVRMRGAGLGAKGSSYGVNTSDSYKDAVKKAMFARFSEM 748
Query: 254 D 254
+
Sbjct: 749 E 749
>sp|P78332|RBM6_HUMAN RNA-binding protein 6 OS=Homo sapiens GN=RBM6 PE=1 SV=5
Length = 1123
Score = 99.8 bits (247), Expect = 2e-20, Method: Composition-based stats.
Identities = 65/196 (33%), Positives = 105/196 (53%), Gaps = 10/196 (5%)
Query: 65 EPEVQEETV--SGEEKQQIDWDKLACLICKRQFNSKDILKKHTQLSELHKSNLKMWYTCR 122
+P+ +EE EE + DW+KLACL+C+RQF +K++L KH QLS+LHK NL++ +
Sbjct: 932 QPQKREEQTKKENEEDKLTDWNKLACLLCRRQFPNKEVLIKHQQLSDLHKQNLEIHRKIK 991
Query: 123 NLDPNDAV----HRAVQYRDRAKERRLKYGEPEVPPACKLKAKYSKVKEATVTFEEPTKK 178
+ A R +++ R +RR K + P + + KYS+ ++ + K+
Sbjct: 992 QSEQELAYLERREREGKFKGRGNDRREKLQSFDSPE--RKRIKYSRETDSDRKLVD--KE 1047
Query: 179 GIGADNVGNKLLQKMGWTQGQGLGKTNQGRTSIIEAEARISSAGLGTNAIGMTPAPGETY 238
I + G + Q GW +G GLG + G S EAE R+ +G + ETY
Sbjct: 1048 DIDTSSKGGCVQQATGWRKGTGLGYGHPGLASSEEAEGRMRGPSVGASGRTSKRQSNETY 1107
Query: 239 KDCVKKMMRARYSQID 254
+D V+++M ARY ++D
Sbjct: 1108 RDAVRRVMFARYKELD 1123
>sp|P87143|YDMD_SCHPO Uncharacterized RNA-binding protein C57A7.13 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPAC57A7.13 PE=4 SV=1
Length = 565
Score = 68.2 bits (165), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 76/178 (42%), Gaps = 30/178 (16%)
Query: 86 LACLICKRQFNSKDILKKHTQLSELHKSNLKMWYTCRNLDPNDAVHR-----AVQYRDRA 140
L C++C+R+F S + KH S +H +NLK + + +HR +V YRDRA
Sbjct: 404 LICVLCERKFQSWGHVVKHITQSIMHNNNLKNHELVSSAEL--LMHRVRQTESVDYRDRA 461
Query: 141 KERRLKYGEPEVPPACKLKAKYSKVKEATVTFEEPTKKGIGADNVGNKLLQKMGWTQGQG 200
ERR+ VP A +K +F + NV K+L MGW +G G
Sbjct: 462 TERRI------VPAASSDTIVEAKKSSQGSSFHSTS-------NVSMKMLNSMGWNKGSG 508
Query: 201 LGKTNQGRTSIIEAEARISSAGLGTNA----IGMTPAPGETYKDCVKKMMRARYSQID 254
LG G I+ + GLG I MTP D VK R+ Y Q D
Sbjct: 509 LGTNENGIKEAIQPTMYLPGVGLGNKGSKIQINMTPV------DRVKDRARSLYFQND 560
>sp|Q94C11|SUGP1_ARATH SURP and G-patch domain-containing protein 1-like protein
OS=Arabidopsis thaliana GN=At3g52120 PE=2 SV=1
Length = 443
Score = 54.3 bits (129), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 180 IGADNVGNKLLQKMGWTQGQGLGKTNQGRT-SIIEAEARISSAGLGTNAIGMTPAPGETY 238
I ADNVG+KLL KMGW +G+G+G + +G I+ + + ++ G+G +A G + Y
Sbjct: 358 IQADNVGHKLLSKMGWKEGEGIGSSRKGMADPIMAGDVKTNNLGVGASAPGEVKPEDDIY 417
Query: 239 KDCVKKMM 246
+ K+MM
Sbjct: 418 EQYKKRMM 425
>sp|A2A6A1|GPTC8_MOUSE G patch domain-containing protein 8 OS=Mus musculus GN=Gpatch8 PE=2
SV=1
Length = 1505
Score = 53.1 bits (126), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 31/47 (65%)
Query: 178 KGIGADNVGNKLLQKMGWTQGQGLGKTNQGRTSIIEAEARISSAGLG 224
K I +DN+G++LLQK GW GQGLGK+ QGRT I + G+G
Sbjct: 36 KPIESDNIGHRLLQKHGWKLGQGLGKSLQGRTDPIPIVVKYDVMGMG 82
>sp|Q9UKJ3|GPTC8_HUMAN G patch domain-containing protein 8 OS=Homo sapiens GN=GPATCH8 PE=1
SV=2
Length = 1502
Score = 52.8 bits (125), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 31/47 (65%)
Query: 178 KGIGADNVGNKLLQKMGWTQGQGLGKTNQGRTSIIEAEARISSAGLG 224
K I +DN+G++LLQK GW GQGLGK+ QGRT I + G+G
Sbjct: 36 KPIESDNIGHRLLQKHGWKLGQGLGKSLQGRTDPIPIVVKYDVMGMG 82
>sp|Q75E62|SQS1_ASHGO Protein SQS1 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 /
FGSC 9923 / NRRL Y-1056) GN=SQS1 PE=3 SV=1
Length = 679
Score = 49.7 bits (117), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 41/66 (62%), Gaps = 4/66 (6%)
Query: 159 KAKYSKVKEATVTFEEPTKKGIGADNVGNKLLQKMGWTQGQGLG-KTNQGRTSIIEAEAR 217
+AK+ + A V + PT IG DNVG +LL+K+GWT G+GLG N+G + + A +
Sbjct: 613 RAKFHVREGAIVGGDAPT---IGQDNVGRRLLEKLGWTHGEGLGVHGNKGISEPLMARVK 669
Query: 218 ISSAGL 223
+ +GL
Sbjct: 670 KNRSGL 675
>sp|Q6C233|SQS1_YARLI Protein SQS1 OS=Yarrowia lipolytica (strain CLIB 122 / E 150)
GN=SQS1 PE=3 SV=1
Length = 812
Score = 48.9 bits (115), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 30/46 (65%)
Query: 179 GIGADNVGNKLLQKMGWTQGQGLGKTNQGRTSIIEAEARISSAGLG 224
I N+G LLQKMGWT G+GLG ++G + I A+ +IS G+G
Sbjct: 766 AIDDSNIGRLLLQKMGWTTGEGLGAQSRGISEPIIAKVKISKRGIG 811
>sp|Q9NW75|GPTC2_HUMAN G patch domain-containing protein 2 OS=Homo sapiens GN=GPATCH2 PE=1
SV=1
Length = 528
Score = 48.5 bits (114), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 32/56 (57%)
Query: 169 TVTFEEPTKKGIGADNVGNKLLQKMGWTQGQGLGKTNQGRTSIIEAEARISSAGLG 224
T F + I +N+GN++LQ MGWT G GLG+ +G + I+A R GLG
Sbjct: 454 TAGFVGENAQPILENNIGNRMLQNMGWTPGSGLGRDGKGISEPIQAMQRPKGLGLG 509
>sp|Q803R5|MTR1_DANRE Cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 1 OS=Danio
rerio GN=ftsjd2 PE=2 SV=1
Length = 829
Score = 48.1 bits (113), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 37/68 (54%)
Query: 163 SKVKEATVTFEEPTKKGIGADNVGNKLLQKMGWTQGQGLGKTNQGRTSIIEAEARISSAG 222
S+ + ++ E + K +NV KL+ KMG+ +G+GLGK QGR I+EA + G
Sbjct: 60 SQNSQGSMAHNEASNKFAMYNNVSQKLMAKMGFREGEGLGKYGQGRKEIVEASTQRGRRG 119
Query: 223 LGTNAIGM 230
LG G
Sbjct: 120 LGLMLKGF 127
>sp|Q7TQC7|GPTC2_MOUSE G patch domain-containing protein 2 OS=Mus musculus GN=Gpatch2 PE=2
SV=2
Length = 527
Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Query: 184 NVGNKLLQKMGWTQGQGLGKTNQGRTSIIEAEARISSAGLG---TNAIGMTPAP 234
N+GN++LQ MGWT G GLG+ +G ++A R GLG + +PAP
Sbjct: 468 NIGNRMLQSMGWTPGSGLGRDGRGIAEPVQAVQRPKGLGLGFPLPKSSPTSPAP 521
>sp|Q5R981|MTR1_PONAB Cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 1 OS=Pongo
abelii GN=FTSJD2 PE=2 SV=1
Length = 835
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 31/48 (64%)
Query: 183 DNVGNKLLQKMGWTQGQGLGKTNQGRTSIIEAEARISSAGLGTNAIGM 230
++V KL+ KMG+ +G+GLGK +QGR I+EA ++ GLG G
Sbjct: 88 NSVSQKLMAKMGFREGEGLGKYSQGRKDIVEASSQKGRRGLGLTLRGF 135
>sp|Q8N1G2|MTR1_HUMAN Cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 1 OS=Homo
sapiens GN=FTSJD2 PE=1 SV=1
Length = 835
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 31/48 (64%)
Query: 183 DNVGNKLLQKMGWTQGQGLGKTNQGRTSIIEAEARISSAGLGTNAIGM 230
++V KL+ KMG+ +G+GLGK +QGR I+EA ++ GLG G
Sbjct: 88 NSVSQKLMAKMGFREGEGLGKYSQGRKDIVEASSQKGRRGLGLTLRGF 135
>sp|Q6FP19|SQS1_CANGA Protein SQS1 OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM
3761 / NBRC 0622 / NRRL Y-65) GN=SQS1 PE=3 SV=1
Length = 808
Score = 45.8 bits (107), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 44/86 (51%), Gaps = 8/86 (9%)
Query: 139 RAKERRLKYGEPEVPPACKLKAKYSKVKEATVTFEEPTKKGIGADNVGNKLLQKMGWTQG 198
R KE +K P K VKE V E + IG DN+G ++L+K+GW+ G
Sbjct: 712 RPKEDAIKENSGRRGPTAKFH-----VKEGEVVGENAPE--IGQDNIGRRMLEKLGWSSG 764
Query: 199 QGLG-KTNQGRTSIIEAEARISSAGL 223
+GLG N+G + + A + S +GL
Sbjct: 765 EGLGAHGNKGISIPVMARVKKSKSGL 790
>sp|Q8CH02|SUGP1_MOUSE SURP and G-patch domain-containing protein 1 OS=Mus musculus
GN=Sugp1 PE=1 SV=1
Length = 643
Score = 45.8 bits (107), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 42/88 (47%), Gaps = 11/88 (12%)
Query: 162 YSKVKEATVTFEEPTKKGIGADNVGNKLLQKMGWTQGQGLGKTNQG-RTSIIEAEARISS 220
YS+ KE +T E N+G ++L KMGW +G+GLG QG + + + I
Sbjct: 550 YSEYKEFKLTVE----------NIGYQMLMKMGWKEGEGLGTEGQGIKNPVNKGATTIDG 599
Query: 221 AGLGTNAIGMTPAPGETYKDCVKKMMRA 248
AG G + + Y+ K+MM A
Sbjct: 600 AGFGIDRPAELSKEDDEYEAFRKRMMLA 627
>sp|Q68FU8|SUGP1_RAT SURP and G-patch domain-containing protein 1 OS=Rattus norvegicus
GN=Sugp1 PE=2 SV=1
Length = 644
Score = 45.8 bits (107), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 42/88 (47%), Gaps = 11/88 (12%)
Query: 162 YSKVKEATVTFEEPTKKGIGADNVGNKLLQKMGWTQGQGLGKTNQG-RTSIIEAEARISS 220
YS+ KE +T E N+G ++L KMGW +G+GLG QG + + + I
Sbjct: 551 YSEYKEFKLTVE----------NIGYQMLMKMGWKEGEGLGTEGQGIKNPVNKGATTIDG 600
Query: 221 AGLGTNAIGMTPAPGETYKDCVKKMMRA 248
AG G + + Y+ K+MM A
Sbjct: 601 AGFGIDRPAELSKEDDEYEAFRKRMMLA 628
>sp|Q0IIX9|TFP11_XENTR Tuftelin-interacting protein 11 OS=Xenopus tropicalis GN=tfip11
PE=2 SV=2
Length = 825
Score = 45.4 bits (106), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 27/40 (67%)
Query: 185 VGNKLLQKMGWTQGQGLGKTNQGRTSIIEAEARISSAGLG 224
+G KLLQKMG+ QG+GLGK QG + IEA+ R +G
Sbjct: 148 IGQKLLQKMGYVQGRGLGKNAQGIIAPIEAKQRKGKGAVG 187
>sp|Q8IWZ8|SUGP1_HUMAN SURP and G-patch domain-containing protein 1 OS=Homo sapiens
GN=SUGP1 PE=1 SV=2
Length = 645
Score = 45.4 bits (106), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 42/88 (47%), Gaps = 11/88 (12%)
Query: 162 YSKVKEATVTFEEPTKKGIGADNVGNKLLQKMGWTQGQGLGKTNQG-RTSIIEAEARISS 220
YS+ KE +T E N+G ++L KMGW +G+GLG QG + + + +
Sbjct: 552 YSEYKEFKLTVE----------NIGYQMLMKMGWKEGEGLGSEGQGIKNPVNKGTTTVDG 601
Query: 221 AGLGTNAIGMTPAPGETYKDCVKKMMRA 248
AG G + + Y+ K+MM A
Sbjct: 602 AGFGIDRPAELSKEDDEYEAFRKRMMLA 629
>sp|Q6CQ59|SQS1_KLULA Protein SQS1 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 /
DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=SQS1 PE=3
SV=1
Length = 740
Score = 45.4 bits (106), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
Query: 180 IGADNVGNKLLQKMGWTQGQGLG-KTNQGRTSIIEAEARISSAGL 223
IG DN+G ++L+K+GW GQGLG NQG I A+ + + +GL
Sbjct: 688 IGIDNIGRRMLEKLGWNIGQGLGAHGNQGINEPILAKVKKNKSGL 732
>sp|A2VE39|MTR1_BOVIN Cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 1 OS=Bos
taurus GN=FTSJD2 PE=2 SV=1
Length = 835
Score = 45.1 bits (105), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 30/48 (62%)
Query: 183 DNVGNKLLQKMGWTQGQGLGKTNQGRTSIIEAEARISSAGLGTNAIGM 230
++V KL+ KMG+ +G+GLGK +QGR I+EA + GLG G
Sbjct: 88 NSVSQKLMAKMGFKEGEGLGKYSQGRKDIVEASNQKGRRGLGLTLQGF 135
>sp|D2HRF1|MTR1_AILME Cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 1
OS=Ailuropoda melanoleuca GN=FTSJD2 PE=3 SV=1
Length = 835
Score = 45.1 bits (105), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 30/48 (62%)
Query: 183 DNVGNKLLQKMGWTQGQGLGKTNQGRTSIIEAEARISSAGLGTNAIGM 230
++V KL+ KMG+ +G+GLGK +QGR I+EA + GLG G
Sbjct: 88 NSVSQKLMAKMGFREGEGLGKYSQGRKDIVEASNQKGRRGLGLTLQGF 135
>sp|Q59UG4|SQS1_CANAL Protein SQS1 OS=Candida albicans (strain SC5314 / ATCC MYA-2876)
GN=SQS1 PE=3 SV=1
Length = 705
Score = 44.7 bits (104), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
Query: 180 IGADNVGNKLLQKMGWTQGQGLG-KTNQGRTSIIEAEARISSAGL 223
IG+ N+G ++L+K+GW QGQGLG N+G I A+ + S G+
Sbjct: 660 IGSSNLGRQMLEKLGWIQGQGLGVDGNKGINEPILAKVKTSKTGI 704
>sp|Q6BYP9|SQS1_DEBHA Protein SQS1 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767
/ JCM 1990 / NBRC 0083 / IGC 2968) GN=SQS1 PE=3 SV=2
Length = 808
Score = 44.3 bits (103), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 32/45 (71%), Gaps = 1/45 (2%)
Query: 180 IGADNVGNKLLQKMGWTQGQGLG-KTNQGRTSIIEAEARISSAGL 223
IG +N+G KLL+K+GW++G+GLG N+G + + A+ + S GL
Sbjct: 763 IGTNNIGRKLLEKLGWSKGEGLGAHGNKGISEPVVAKIKKSKTGL 807
>sp|Q6DGZ0|CCD75_DANRE Coiled-coil domain-containing protein 75 OS=Danio rerio GN=ccdc75
PE=2 SV=1
Length = 262
Score = 43.9 bits (102), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 26/49 (53%)
Query: 180 IGADNVGNKLLQKMGWTQGQGLGKTNQGRTSIIEAEARISSAGLGTNAI 228
IG+ N G LLQKMG+ GQGLGK GR + + G+G +
Sbjct: 68 IGSQNKGFALLQKMGYKAGQGLGKEGAGRVEPVPLNIKTDRGGIGMEEV 116
>sp|Q5U2Z5|MTR1_RAT Cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 1 OS=Rattus
norvegicus GN=Ftsjd2 PE=2 SV=1
Length = 837
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 29/48 (60%)
Query: 183 DNVGNKLLQKMGWTQGQGLGKTNQGRTSIIEAEARISSAGLGTNAIGM 230
++V KL+ KMG+ +G+GLGK +QGR I+E + GLG G
Sbjct: 87 NSVSQKLMAKMGFREGEGLGKYSQGRKDIVETSNQKGRRGLGLTLQGF 134
>sp|O74363|YND2_SCHPO G-patch and R3H domain-containing protein C30B4.02c
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPBC30B4.02c PE=4 SV=1
Length = 695
Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 66/127 (51%), Gaps = 13/127 (10%)
Query: 102 KKHTQLSELHK---SNLKMWYTCRNLDPNDAVHRAVQYRDRAKERRLKYGEPEVPPACKL 158
K++T LS+ HK S++ + R ++ + V+Y+ +K R + + +
Sbjct: 578 KRYTMLSKTHKFDASSVDLVSLTRIME---RLQTRVEYQSFSKSGR----KSRMTVSSVR 630
Query: 159 KAKYSKVKEATVTFEEPTKKGIGADNVGNKLLQKMGWTQGQGLGK-TNQGRTSIIEAEAR 217
+K ++V + + E+ + I +N G +LL+K+GW G+GLG N+G + A +
Sbjct: 631 SSKATRVYDGQIVGEDAPE--ISKENPGRRLLEKLGWYAGKGLGHPENEGSKDSLRAIVK 688
Query: 218 ISSAGLG 224
+S +GLG
Sbjct: 689 VSRSGLG 695
>sp|Q9CZX5|PINX1_MOUSE PIN2/TERF1-interacting telomerase inhibitor 1 OS=Mus musculus
GN=Pinx1 PE=2 SV=2
Length = 332
Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 27/40 (67%)
Query: 185 VGNKLLQKMGWTQGQGLGKTNQGRTSIIEAEARISSAGLG 224
G K+L+KMGW++G+GLG QG T I+ + + + GLG
Sbjct: 29 FGQKMLEKMGWSKGKGLGAQEQGATEHIKVKVKNNHLGLG 68
>sp|Q96BK5|PINX1_HUMAN PIN2/TERF1-interacting telomerase inhibitor 1 OS=Homo sapiens
GN=PINX1 PE=1 SV=2
Length = 328
Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 27/40 (67%)
Query: 185 VGNKLLQKMGWTQGQGLGKTNQGRTSIIEAEARISSAGLG 224
G ++L+KMGW++G+GLG QG T I+ + + + GLG
Sbjct: 29 FGQRMLEKMGWSKGKGLGAQEQGATDHIKVQVKNNHLGLG 68
>sp|P42698|DR111_ARATH DNA-damage-repair/toleration protein DRT111, chloroplastic
OS=Arabidopsis thaliana GN=DRT111 PE=2 SV=2
Length = 387
Score = 42.7 bits (99), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 31/52 (59%), Gaps = 3/52 (5%)
Query: 179 GIGADN---VGNKLLQKMGWTQGQGLGKTNQGRTSIIEAEARISSAGLGTNA 227
G+GA +++ KMGW QGQGLGK+ QG T+ + A+ AG+ NA
Sbjct: 208 GVGAGGQMTAAQRMMAKMGWKQGQGLGKSEQGITTPLMAKKTDRRAGVIVNA 259
>sp|A4L691|PINX1_RAT PIN2/TERF1-interacting telomerase inhibitor 1 OS=Rattus norvegicus
GN=Pinx1 PE=2 SV=1
Length = 331
Score = 42.7 bits (99), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 27/40 (67%)
Query: 185 VGNKLLQKMGWTQGQGLGKTNQGRTSIIEAEARISSAGLG 224
G K+L+KMGW++G+GLG QG T I+ + + + GLG
Sbjct: 29 FGQKMLEKMGWSKGKGLGAQEQGATEHIKVKVKNNHLGLG 68
>sp|Q66J74|TFP11_XENLA Tuftelin-interacting protein 11 OS=Xenopus laevis GN=tfip11 PE=2
SV=1
Length = 824
Score = 42.7 bits (99), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 26/40 (65%)
Query: 185 VGNKLLQKMGWTQGQGLGKTNQGRTSIIEAEARISSAGLG 224
+G KLLQKMG+ G+GLGK QG + IEA+ R +G
Sbjct: 148 IGQKLLQKMGYMPGRGLGKNAQGIIAPIEAKQRRGKGAVG 187
>sp|Q9DBC3|MTR1_MOUSE Cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 1 OS=Mus
musculus GN=Ftsjd2 PE=1 SV=1
Length = 837
Score = 42.7 bits (99), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 29/48 (60%)
Query: 183 DNVGNKLLQKMGWTQGQGLGKTNQGRTSIIEAEARISSAGLGTNAIGM 230
++V +L+ KMG+ +G+GLGK +QGR I+E + GLG G
Sbjct: 87 NSVSQRLMAKMGFREGEGLGKYSQGRKDIVETSNQKGRRGLGLTLQGF 134
>sp|A4UMC5|TFP11_RABIT Tuftelin-interacting protein 11 OS=Oryctolagus cuniculus GN=TFIP11
PE=2 SV=1
Length = 837
Score = 42.4 bits (98), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 26/40 (65%)
Query: 185 VGNKLLQKMGWTQGQGLGKTNQGRTSIIEAEARISSAGLG 224
+G KLLQKMG+ G+GLGK QG + IEA+ R +G
Sbjct: 152 IGQKLLQKMGYVPGRGLGKNAQGIINPIEAKQRKGKGAVG 191
>sp|Q5U2Y6|TFP11_RAT Tuftelin-interacting protein 11 OS=Rattus norvegicus GN=Tfip11 PE=2
SV=1
Length = 837
Score = 42.4 bits (98), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 26/40 (65%)
Query: 185 VGNKLLQKMGWTQGQGLGKTNQGRTSIIEAEARISSAGLG 224
+G KLLQKMG+ G+GLGK QG + IEA+ R +G
Sbjct: 152 IGQKLLQKMGYVPGRGLGKNAQGIINPIEAKQRKGKGAVG 191
>sp|Q5R5K8|TFP11_PONAB Tuftelin-interacting protein 11 OS=Pongo abelii GN=TFIP11 PE=2 SV=1
Length = 837
Score = 42.4 bits (98), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 26/40 (65%)
Query: 185 VGNKLLQKMGWTQGQGLGKTNQGRTSIIEAEARISSAGLG 224
+G KLLQKMG+ G+GLGK QG + IEA+ R +G
Sbjct: 152 IGQKLLQKMGYVPGRGLGKNAQGIINPIEAKQRKGKGAVG 191
>sp|Q06AK6|TFP11_PIG Tuftelin-interacting protein 11 OS=Sus scrofa GN=TFIP11 PE=2 SV=1
Length = 836
Score = 42.4 bits (98), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 26/40 (65%)
Query: 185 VGNKLLQKMGWTQGQGLGKTNQGRTSIIEAEARISSAGLG 224
+G KLLQKMG+ G+GLGK QG + IEA+ R +G
Sbjct: 152 IGQKLLQKMGYVPGRGLGKNAQGIINPIEAKQRKGKGAVG 191
>sp|A1XD95|TFP11_MACFA Tuftelin-interacting protein 11 OS=Macaca fascicularis GN=TFIP11
PE=2 SV=1
Length = 837
Score = 42.4 bits (98), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 26/40 (65%)
Query: 185 VGNKLLQKMGWTQGQGLGKTNQGRTSIIEAEARISSAGLG 224
+G KLLQKMG+ G+GLGK QG + IEA+ R +G
Sbjct: 152 IGQKLLQKMGYVPGRGLGKNAQGIINPIEAKQRKGKGAVG 191
>sp|A1XD97|TFP11_CANFA Tuftelin-interacting protein 11 OS=Canis familiaris GN=TFIP11 PE=2
SV=1
Length = 837
Score = 42.4 bits (98), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 26/40 (65%)
Query: 185 VGNKLLQKMGWTQGQGLGKTNQGRTSIIEAEARISSAGLG 224
+G KLLQKMG+ G+GLGK QG + IEA+ R +G
Sbjct: 152 IGQKLLQKMGYVPGRGLGKNAQGIINPIEAKQRKGKGAVG 191
>sp|Q9ERA6|TFP11_MOUSE Tuftelin-interacting protein 11 OS=Mus musculus GN=Tfip11 PE=1 SV=1
Length = 838
Score = 42.4 bits (98), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 26/40 (65%)
Query: 185 VGNKLLQKMGWTQGQGLGKTNQGRTSIIEAEARISSAGLG 224
+G KLLQKMG+ G+GLGK QG + IEA+ R +G
Sbjct: 153 IGQKLLQKMGYVPGRGLGKNAQGIINPIEAKQRKGKGAVG 192
>sp|Q6GQ76|MTR1_XENLA Cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 1 OS=Xenopus
laevis GN=ftsjd2 PE=2 SV=1
Length = 846
Score = 42.4 bits (98), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 28/48 (58%)
Query: 183 DNVGNKLLQKMGWTQGQGLGKTNQGRTSIIEAEARISSAGLGTNAIGM 230
++V KL+ KMG+ +G+GLGK QGR I+E + GLG G
Sbjct: 88 NSVSQKLMAKMGFREGEGLGKFGQGRKEIVETSKQKGRRGLGMVLKGF 135
>sp|Q9UBB9|TFP11_HUMAN Tuftelin-interacting protein 11 OS=Homo sapiens GN=TFIP11 PE=1 SV=1
Length = 837
Score = 42.4 bits (98), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 26/40 (65%)
Query: 185 VGNKLLQKMGWTQGQGLGKTNQGRTSIIEAEARISSAGLG 224
+G KLLQKMG+ G+GLGK QG + IEA+ R +G
Sbjct: 152 IGQKLLQKMGYVPGRGLGKNAQGIINPIEAKQRKGKGAVG 191
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.310 0.125 0.359
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 92,704,652
Number of Sequences: 539616
Number of extensions: 3736796
Number of successful extensions: 12766
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 148
Number of HSP's successfully gapped in prelim test: 73
Number of HSP's that attempted gapping in prelim test: 12493
Number of HSP's gapped (non-prelim): 299
length of query: 254
length of database: 191,569,459
effective HSP length: 115
effective length of query: 139
effective length of database: 129,513,619
effective search space: 18002393041
effective search space used: 18002393041
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 60 (27.7 bits)