Your job contains 1 sequence.
>psy2450
MEKWAKTLNHRKEISKVANNTEQAASESPSQSTQGSADVCFSVVGNNREEKTKKSLVAAY
ESDEEPEVQEETVSGEEKQQIDWDKLACLICKRQFNSKDILKKHTQLSELHKSNLKMWYT
CRNLDPNDAVHRAVQYRDRAKERRLKYGEPEVPPACKLKAKYSKVKEATVTFEEPTKKGI
GADNVGNKLLQKMGWTQGQGLGKTNQGRTSIIEAEARISSAGLGTNAIGMTPAPGETYKD
CVKKMMRARYSQID
The BLAST search returned 8 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy2450
(254 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|A4IGK4 - symbol:rbm5 "RNA-binding protein 5" sp... 454 2.3e-43 2
UNIPROTKB|A0JMV4 - symbol:rbm5-a "RNA-binding protein 5-A... 464 3.1e-43 1
UNIPROTKB|F1SPQ8 - symbol:RBM5 "Uncharacterized protein" ... 461 5.9e-43 1
UNIPROTKB|P52756 - symbol:RBM5 "RNA-binding protein 5" sp... 457 1.6e-42 1
UNIPROTKB|Q1RMU5 - symbol:RBM5 "RNA-binding protein 5" sp... 454 3.4e-42 1
UNIPROTKB|E2QUP3 - symbol:RBM5 "Uncharacterized protein" ... 454 3.4e-42 1
MGI|MGI:1933204 - symbol:Rbm5 "RNA binding motif protein ... 454 3.4e-42 1
RGD|1305059 - symbol:Rbm5 "RNA binding motif protein 5" s... 454 3.4e-42 1
FB|FBgn0031318 - symbol:CG4887 species:7227 "Drosophila m... 392 2.3e-41 2
FB|FBgn0031319 - symbol:CG4896 species:7227 "Drosophila m... 395 4.1e-41 2
UNIPROTKB|E1BXK5 - symbol:E1BXK5 "Uncharacterized protein... 431 1.1e-39 1
UNIPROTKB|F1MFZ9 - symbol:RBM10 "Uncharacterized protein"... 425 8.5e-39 1
RGD|631366 - symbol:Rbm10 "RNA binding motif protein 10" ... 423 9.2e-39 1
UNIPROTKB|P70501 - symbol:Rbm10 "RNA-binding protein 10" ... 423 9.2e-39 1
UNIPROTKB|J9P453 - symbol:RBM10 "Uncharacterized protein"... 421 1.1e-38 1
UNIPROTKB|F1RWX6 - symbol:LOC100525622 "Uncharacterized p... 421 1.2e-38 1
UNIPROTKB|F1LWM0 - symbol:F1LWM0 "Uncharacterized protein... 423 1.2e-38 1
UNIPROTKB|P98175 - symbol:RBM10 "RNA-binding protein 10" ... 423 1.2e-38 1
MGI|MGI:2384310 - symbol:Rbm10 "RNA binding motif protein... 423 1.2e-38 1
UNIPROTKB|F1PDM2 - symbol:RBM10 "Uncharacterized protein"... 421 2.3e-38 1
UNIPROTKB|Q6DDU9 - symbol:rbm5-b "RNA-binding protein 5-B... 274 1.3e-27 2
UNIPROTKB|E1BZU3 - symbol:RBM6 "Uncharacterized protein" ... 295 8.7e-25 1
UNIPROTKB|E2R8Z4 - symbol:RBM6 "Uncharacterized protein" ... 286 8.0e-24 1
UNIPROTKB|B4DNY1 - symbol:RBM6 "cDNA FLJ60318, highly sim... 277 8.7e-24 1
UNIPROTKB|E1BC65 - symbol:RBM6 "Uncharacterized protein" ... 284 1.3e-23 1
UNIPROTKB|F1SPQ9 - symbol:RBM6 "Uncharacterized protein" ... 281 2.7e-23 1
UNIPROTKB|E9PGM9 - symbol:RBM6 "RNA-binding protein 6" sp... 277 6.0e-23 1
UNIPROTKB|P78332 - symbol:RBM6 "RNA-binding protein 6" sp... 277 7.3e-23 1
WB|WBGene00020346 - symbol:T08B2.5 species:6239 "Caenorha... 179 8.4e-22 2
RGD|1560367 - symbol:Rbm6 "RNA binding motif protein 6" s... 263 2.3e-21 1
ZFIN|ZDB-GENE-100922-245 - symbol:si:ch73-205c16.2 "si:ch... 180 7.8e-16 2
UNIPROTKB|Q2KF84 - symbol:MGCH7_ch7g802 "Putative unchara... 182 1.1e-12 2
ASPGD|ASPL0000078120 - symbol:AN4850 species:162425 "Emer... 184 1.4e-12 1
DICTYBASE|DDB_G0269006 - symbol:DDB_G0269006 "D111/G-patc... 129 3.5e-10 2
POMBASE|SPAC57A7.13 - symbol:SPAC57A7.13 "RNA-binding pro... 166 5.4e-10 1
UNIPROTKB|J9NSS8 - symbol:RBM6 "Uncharacterized protein" ... 168 7.4e-10 1
WB|WBGene00013224 - symbol:Y55D9A.2 species:6239 "Caenorh... 150 4.3e-08 1
UNIPROTKB|C9J250 - symbol:RBM6 "RNA-binding protein 6" sp... 126 8.2e-08 1
TAIR|locus:2083750 - symbol:AT3G52120 species:3702 "Arabi... 144 1.7e-07 1
UNIPROTKB|E2RLI2 - symbol:AGGF1 "Uncharacterized protein"... 121 1.1e-06 3
UNIPROTKB|F1MKY1 - symbol:AGGF1 "Uncharacterized protein"... 119 1.4e-05 2
MGI|MGI:1913799 - symbol:Aggf1 "angiogenic factor with G ... 114 1.7e-05 2
UNIPROTKB|I3L6Q0 - symbol:I3L6Q0 "Uncharacterized protein... 104 2.4e-05 1
ZFIN|ZDB-GENE-060929-836 - symbol:aggf1 "angiogenic facto... 121 3.3e-05 2
ZFIN|ZDB-GENE-030131-6966 - symbol:gpatch8 "G patch domai... 130 3.8e-05 1
UNIPROTKB|Q8N302 - symbol:AGGF1 "Angiogenic factor with G... 115 4.2e-05 2
UNIPROTKB|Q9NW75 - symbol:GPATCH2 "G patch domain-contain... 111 4.4e-05 2
UNIPROTKB|F1NFM6 - symbol:PINX1 "Uncharacterized protein"... 101 5.1e-05 1
UNIPROTKB|I3L834 - symbol:GPATCH2 "Uncharacterized protei... 114 5.5e-05 1
UNIPROTKB|F1M1F0 - symbol:LOC688211 "Protein LOC688211" s... 124 6.3e-05 1
ZFIN|ZDB-GENE-030515-2 - symbol:pinx1 "pin2/trf1-interact... 120 7.4e-05 1
UNIPROTKB|E5RJG9 - symbol:PINX1 "PIN2/TERF1-interacting t... 99 8.5e-05 1
UNIPROTKB|Q5R951 - symbol:DKFZp459G1317 "Putative unchara... 115 0.00012 2
UNIPROTKB|K7EKU0 - symbol:GPATCH8 "G patch domain-contain... 114 0.00012 1
UNIPROTKB|F1S2H1 - symbol:AGGF1 "Uncharacterized protein"... 124 0.00016 2
UNIPROTKB|F1MAK0 - symbol:F1MAK0 "Uncharacterized protein... 116 0.00016 2
UNIPROTKB|Q4R8E5 - symbol:Q4R8E5 "Testis cDNA clone: QtsA... 109 0.00018 2
RGD|1596463 - symbol:Gpatch8 "G patch domain containing 8... 124 0.00018 1
UNIPROTKB|E2RIL0 - symbol:GPATCH8 "Uncharacterized protei... 124 0.00018 1
UNIPROTKB|J9P741 - symbol:GPATCH8 "Uncharacterized protei... 124 0.00018 1
UNIPROTKB|Q9UKJ3 - symbol:GPATCH8 "G patch domain-contain... 124 0.00018 1
MGI|MGI:1918667 - symbol:Gpatch8 "G patch domain containi... 124 0.00018 1
UNIPROTKB|E1BC37 - symbol:GPATCH8 "Uncharacterized protei... 124 0.00018 1
TAIR|locus:2124306 - symbol:AT4G34140 species:3702 "Arabi... 119 0.00018 1
UNIPROTKB|O15226 - symbol:NKRF "NF-kappa-B-repressing fac... 118 0.00035 1
UNIPROTKB|K7GNC7 - symbol:NKRF "Uncharacterized protein" ... 118 0.00035 1
UNIPROTKB|G3V1N1 - symbol:NKRF "NF-kappa-B-repressing fac... 118 0.00035 1
ZFIN|ZDB-GENE-081031-96 - symbol:si:ch73-21k16.4 "si:ch73... 116 0.00036 1
ASPGD|ASPL0000028823 - symbol:AN5578 species:162425 "Emer... 118 0.00040 1
UNIPROTKB|F1RUA0 - symbol:NKRF "Uncharacterized protein" ... 118 0.00041 1
UNIPROTKB|F1PLE1 - symbol:GPATCH2 "Uncharacterized protei... 115 0.00041 2
POMBASE|SPBC30B4.02c - symbol:SPBC30B4.02c "R3H and G-pat... 115 0.00041 2
UNIPROTKB|G3MYW2 - symbol:NKRF "Uncharacterized protein" ... 117 0.00045 1
UNIPROTKB|E2RI67 - symbol:NKRF "Uncharacterized protein" ... 117 0.00052 1
ZFIN|ZDB-GENE-040426-696 - symbol:ftsjd2 "FtsJ methyltran... 116 0.00073 1
MGI|MGI:1924536 - symbol:Nkrf "NF-kappaB repressing facto... 115 0.00075 1
RGD|1563950 - symbol:Nkrf "NFKB repressing factor" specie... 115 0.00075 1
UNIPROTKB|F1NPB2 - symbol:GPATCH8 "Uncharacterized protei... 114 0.00084 1
FB|FBgn0051550 - symbol:CG31550 species:7227 "Drosophila ... 108 0.00097 2
>UNIPROTKB|A4IGK4 [details] [associations]
symbol:rbm5 "RNA-binding protein 5" species:8364 "Xenopus
(Silurana) tropicalis" [GO:0000245 "spliceosomal complex assembly"
evidence=ISS] [GO:0000381 "regulation of alternative mRNA splicing,
via spliceosome" evidence=ISS] [GO:0003729 "mRNA binding"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0043065
"positive regulation of apoptotic process" evidence=ISS]
InterPro:IPR000467 InterPro:IPR000504 InterPro:IPR001876
InterPro:IPR007087 InterPro:IPR012677 InterPro:IPR015880
Pfam:PF00641 Pfam:PF01585 PROSITE:PS00028 PROSITE:PS01358
PROSITE:PS50102 PROSITE:PS50157 PROSITE:PS50174 PROSITE:PS50199
SMART:SM00355 SMART:SM00360 SMART:SM00443 SMART:SM00547
GO:GO:0005634 GO:GO:0000166 GO:GO:0046872 GO:GO:0008270
GO:GO:0003729 Gene3D:3.30.70.330 GO:GO:0005681 GO:GO:0043065
GeneTree:ENSGT00510000046476 GO:GO:0000245 GO:GO:0000381
eggNOG:NOG290849 KO:K13094 HOGENOM:HOG000046285 CTD:10181
OMA:TADSYKD EMBL:CR855749 EMBL:BC135140 RefSeq:NP_001017278.1
UniGene:Str.11018 ProteinModelPortal:A4IGK4 STRING:A4IGK4
Ensembl:ENSXETT00000015911 GeneID:550032 KEGG:xtr:550032
Xenbase:XB-GENE-494987 Bgee:A4IGK4 Uniprot:A4IGK4
Length = 838
Score = 454 (164.9 bits), Expect = 2.3e-43, Sum P(2) = 2.3e-43
Identities = 96/219 (43%), Positives = 136/219 (62%)
Query: 43 VVGNNREEKT-KKSLVAAYESDEEPEVQEETVSG--EEKQQIDWDKLACLICKRQFNSKD 99
+V EEK K+LVAAY D + E + E + G +E++ +DW KLACL+C+RQF +KD
Sbjct: 625 MVNTEEEEKPPNKALVAAYSGDSDNEEESERLLGAVDEEKLLDWKKLACLLCRRQFPNKD 684
Query: 100 ILKKHTQLSELHKSNLKMWYTCR----NLDPNDAVHRAVQYRDRAKERRLKYGEPEVPPA 155
L +H QLS+LHK NL+++ + L+ + R +YRDRA ERR KYG PE PP
Sbjct: 685 ALTRHQQLSDLHKQNLEVYRRSKMSEQELEALELKEREAKYRDRAAERREKYGIPE-PPE 743
Query: 156 CKLKAKYSKVKEATVTFEEPTKKGIGADNVGNKLLQKMGWTQGQGLGKTNQGRTSIIEAE 215
K K + V +E+PTK GI N+GNK+LQ MGW +G GLG+ +QG T+ I+A+
Sbjct: 744 PKRK----RFDPTVVNYEQPTKDGIDNSNIGNKMLQAMGWKEGSGLGRKSQGITAPIQAQ 799
Query: 216 ARISSAGLGTNAIGMTPAPGETYKDCVKKMMRARYSQID 254
R+ AGLG ++YKD V+K M AR+S+++
Sbjct: 800 VRMRGAGLGAKGSSYGVNTSDSYKDAVRKAMFARFSEME 838
Score = 36 (17.7 bits), Expect = 2.3e-43, Sum P(2) = 2.3e-43
Identities = 10/29 (34%), Positives = 13/29 (44%)
Query: 10 HRKEISKVANNTEQAASESPSQSTQGSAD 38
HR VA+ AA S +Q Q S +
Sbjct: 337 HRVSAFSVASTAIAAAQWSSTQQAQQSGE 365
>UNIPROTKB|A0JMV4 [details] [associations]
symbol:rbm5-a "RNA-binding protein 5-A" species:8355
"Xenopus laevis" [GO:0000245 "spliceosomal complex assembly"
evidence=ISS] [GO:0000381 "regulation of alternative mRNA splicing,
via spliceosome" evidence=ISS] [GO:0003729 "mRNA binding"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0043065
"positive regulation of apoptotic process" evidence=ISS]
InterPro:IPR000467 InterPro:IPR000504 InterPro:IPR001876
InterPro:IPR007087 InterPro:IPR012677 InterPro:IPR015880
Pfam:PF00641 Pfam:PF01585 PROSITE:PS00028 PROSITE:PS01358
PROSITE:PS50102 PROSITE:PS50157 PROSITE:PS50174 PROSITE:PS50199
SMART:SM00355 SMART:SM00360 SMART:SM00443 SMART:SM00547
GO:GO:0005634 GO:GO:0000166 GO:GO:0046872 GO:GO:0008270
GO:GO:0003729 Gene3D:3.30.70.330 GO:GO:0005681 GO:GO:0043065
GO:GO:0000245 GO:GO:0000381 KO:K13094 EMBL:BC126019
RefSeq:NP_001090434.1 UniGene:Xl.7259 GeneID:779346 KEGG:xla:779346
CTD:779346 Xenbase:XB-GENE-494991 Uniprot:A0JMV4
Length = 833
Score = 464 (168.4 bits), Expect = 3.1e-43, P = 3.1e-43
Identities = 111/277 (40%), Positives = 160/277 (57%)
Query: 1 MEKWAKTLNHRKEISKVA-------NNTEQAASESPS---QSTQGSA-------DVCFSV 43
ME+WAK+LN +KE K + E AA+++ + QGS D+ V
Sbjct: 564 MERWAKSLNKQKENFKNSFQPLRDEERKESAAADAGFALFEKKQGSLLERQFLPDMMMMV 623
Query: 44 VGNNREEKTKKS-LVAAYESDEEPEVQEETVSG--EEKQQIDWDKLACLICKRQFNSKDI 100
N EEK + LVAAY D + E + E G ++++ +DW KLACL+C+RQF +KD
Sbjct: 624 --NTEEEKPPNTALVAAYSGDSDNEEENERFIGAVDDEKLMDWKKLACLLCRRQFPNKDA 681
Query: 101 LKKHTQLSELHKSNLKMWYTCRNLDPN---DAVHRAVQYRDRAKERRLKYGEPEVPPACK 157
L +H QLS+LHK NL+++ + + + R +YRDRA ERR+KYG PE PP K
Sbjct: 682 LTRHQQLSDLHKQNLEVYRRSKLSEQEYEAEQTERESKYRDRAAERRVKYGIPE-PPEPK 740
Query: 158 LKAKYSKVKEATVTFEEPTKKGIGADNVGNKLLQKMGWTQGQGLGKTNQGRTSIIEAEAR 217
K + V +E+PTK GI N+GNK+LQ MGW +G GLG+ +QG T+ I+A+ R
Sbjct: 741 RK----RFAPTVVNYEQPTKDGIDNSNIGNKMLQAMGWKEGSGLGRKSQGITAPIQAQVR 796
Query: 218 ISSAGLGTNAIGMTPAPGETYKDCVKKMMRARYSQID 254
+ AGLG ++YKD V+K M AR+S+++
Sbjct: 797 MRGAGLGAKGSSYGVNTSDSYKDAVRKAMFARFSEME 833
>UNIPROTKB|F1SPQ8 [details] [associations]
symbol:RBM5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043065 "positive regulation of apoptotic process"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003729 "mRNA
binding" evidence=IEA] [GO:0000381 "regulation of alternative mRNA
splicing, via spliceosome" evidence=IEA] [GO:0000245 "spliceosomal
complex assembly" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000467 InterPro:IPR000504 InterPro:IPR001876
InterPro:IPR007087 InterPro:IPR012677 InterPro:IPR015880
Pfam:PF00641 Pfam:PF01585 PROSITE:PS01358 PROSITE:PS50102
PROSITE:PS50157 PROSITE:PS50174 PROSITE:PS50199 SMART:SM00355
SMART:SM00360 SMART:SM00443 SMART:SM00547 GO:GO:0005634
GO:GO:0000166 GO:GO:0008270 GO:GO:0003729 Gene3D:3.30.70.330
GO:GO:0043065 GeneTree:ENSGT00510000046476 GO:GO:0000245
GO:GO:0000381 KO:K13094 CTD:10181 OMA:TADSYKD EMBL:CU861627
RefSeq:XP_003132269.3 UniGene:Ssc.49591 Ensembl:ENSSSCT00000012473
GeneID:100515237 KEGG:ssc:100515237 Uniprot:F1SPQ8
Length = 815
Score = 461 (167.3 bits), Expect = 5.9e-43, P = 5.9e-43
Identities = 104/221 (47%), Positives = 142/221 (64%)
Query: 43 VVGNNREEKT-KKSLVAAY--ESDEEPEVQEETVSGEEKQQIDWDKLACLICKRQFNSKD 99
+V N EE K+ LVAAY +SD E E+ E S EEK DW K+ACL+C+RQF +KD
Sbjct: 602 LVRNGDEENPLKRGLVAAYSGDSDNEEELVERLESEEEKLA-DWKKMACLLCRRQFPNKD 660
Query: 100 ILKKHTQLSELHKSNLKMWYTCR----NLDPNDAVHRAVQYRDRAKERRLKYGEPEVPPA 155
L +H QLS+LHK N+ ++ R L+ + R ++YRDRA ERR KYG PE PP
Sbjct: 661 ALVRHQQLSDLHKQNMDIYRRSRLSEQELEALELREREMKYRDRAAERREKYGIPE-PPE 719
Query: 156 CKLKAKYSKVKEATVTFEEPTKKGIGADNVGNKLLQKMGWTQGQGLGKTNQGRTSIIEAE 215
K K ++ TV +E+PTK GI N+GNK+LQ MGW +G GLG+ QG T+ IEA+
Sbjct: 720 PKRKKQFDA---GTVNYEQPTKDGIDHSNIGNKMLQAMGWREGSGLGRKCQGITAPIEAQ 776
Query: 216 ARISSAGLGT--NAIGMTPAPGETYKDCVKKMMRARYSQID 254
R+ AGLG +A G+T A ++YKD V+K M AR+++++
Sbjct: 777 VRLKGAGLGAKGSAYGLTGA--DSYKDAVRKAMFARFTEME 815
>UNIPROTKB|P52756 [details] [associations]
symbol:RBM5 "RNA-binding protein 5" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0006915 "apoptotic process"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0000381
"regulation of alternative mRNA splicing, via spliceosome"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0000245 "spliceosomal complex assembly" evidence=IDA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=TAS] [GO:0043065 "positive regulation of apoptotic
process" evidence=IDA;TAS] [GO:0005681 "spliceosomal complex"
evidence=TAS] [GO:0003729 "mRNA binding" evidence=IDA] [GO:0003677
"DNA binding" evidence=TAS] [GO:0003723 "RNA binding" evidence=TAS]
[GO:0006396 "RNA processing" evidence=TAS] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0008380 "RNA splicing" evidence=TAS] [GO:0010467
"gene expression" evidence=TAS] [GO:0005730 "nucleolus"
evidence=IDA] Reactome:REACT_71 InterPro:IPR000467
InterPro:IPR000504 InterPro:IPR001876 InterPro:IPR007087
InterPro:IPR012677 InterPro:IPR015880 Pfam:PF00641 Pfam:PF01585
PROSITE:PS00028 PROSITE:PS01358 PROSITE:PS50102 PROSITE:PS50157
PROSITE:PS50174 PROSITE:PS50199 SMART:SM00355 SMART:SM00360
SMART:SM00443 SMART:SM00547 GO:GO:0006915 GO:GO:0008285
GO:GO:0005654 GO:GO:0000166 EMBL:CH471055 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Reactome:REACT_1675 GO:GO:0003729
Gene3D:3.30.70.330 GO:GO:0005681 GO:GO:0043065 GO:GO:0000245
GO:GO:0000381 eggNOG:NOG290849 HOVERGEN:HBG000318 KO:K13094
CTD:10181 OMA:TADSYKD OrthoDB:EOG4VT5WV EMBL:U23946 EMBL:AF091263
EMBL:AF103802 EMBL:AF107493 EMBL:AK297249 EMBL:AK297445
EMBL:AK302766 EMBL:AK314032 EMBL:U73168 IPI:IPI00005036
IPI:IPI00796867 IPI:IPI00927051 IPI:IPI00930333 IPI:IPI00930619
RefSeq:NP_005769.1 UniGene:Hs.439480 PDB:2LK0 PDB:2LK1 PDB:2LKZ
PDBsum:2LK0 PDBsum:2LK1 PDBsum:2LKZ ProteinModelPortal:P52756
SMR:P52756 DIP:DIP-47277N IntAct:P52756 MINT:MINT-1406668
STRING:P52756 PhosphoSite:P52756 DMDM:13124794 PaxDb:P52756
PRIDE:P52756 Ensembl:ENST00000347869 Ensembl:ENST00000469838
GeneID:10181 KEGG:hsa:10181 UCSC:uc003cyg.3 GeneCards:GC03P050101
HGNC:HGNC:9902 HPA:HPA017335 HPA:HPA018011 MIM:606884
neXtProt:NX_P52756 PharmGKB:PA34267 InParanoid:P52756
PhylomeDB:P52756 ChiTaRS:RBM5 GenomeRNAi:10181 NextBio:38542
ArrayExpress:P52756 Bgee:P52756 Genevestigator:P52756
GermOnline:ENSG00000003756 Uniprot:P52756
Length = 815
Score = 457 (165.9 bits), Expect = 1.6e-42, P = 1.6e-42
Identities = 103/221 (46%), Positives = 142/221 (64%)
Query: 43 VVGNNREEKT-KKSLVAAY--ESDEEPEVQEETVSGEEKQQIDWDKLACLICKRQFNSKD 99
+V N EE K+ LVAAY +SD E E+ E S EEK DW K+ACL+C+RQF +KD
Sbjct: 602 LVRNGDEENPLKRGLVAAYSGDSDNEEELVERLESEEEKLA-DWKKMACLLCRRQFPNKD 660
Query: 100 ILKKHTQLSELHKSNLKMWYTCR----NLDPNDAVHRAVQYRDRAKERRLKYGEPEVPPA 155
L +H QLS+LHK N+ ++ R L+ + R ++YRDRA ERR KYG PE PP
Sbjct: 661 ALVRHQQLSDLHKQNMDIYRRSRLSEQELEALELREREMKYRDRAAERREKYGIPE-PPE 719
Query: 156 CKLKAKYSKVKEATVTFEEPTKKGIGADNVGNKLLQKMGWTQGQGLGKTNQGRTSIIEAE 215
K K ++ TV +E+PTK GI N+GNK+LQ MGW +G GLG+ QG T+ IEA+
Sbjct: 720 PKRKKQFDA---GTVNYEQPTKDGIDHSNIGNKMLQAMGWREGSGLGRKCQGITAPIEAQ 776
Query: 216 ARISSAGLGT--NAIGMTPAPGETYKDCVKKMMRARYSQID 254
R+ AGLG +A G++ A ++YKD V+K M AR+++++
Sbjct: 777 VRLKGAGLGAKGSAYGLSGA--DSYKDAVRKAMFARFTEME 815
>UNIPROTKB|Q1RMU5 [details] [associations]
symbol:RBM5 "RNA-binding protein 5" species:9913 "Bos
taurus" [GO:0000245 "spliceosomal complex assembly" evidence=ISS]
[GO:0003729 "mRNA binding" evidence=ISS] [GO:0043065 "positive
regulation of apoptotic process" evidence=ISS] [GO:0000381
"regulation of alternative mRNA splicing, via spliceosome"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0006915
"apoptotic process" evidence=IEA] [GO:0005681 "spliceosomal
complex" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000467
InterPro:IPR000504 InterPro:IPR001876 InterPro:IPR007087
InterPro:IPR012677 InterPro:IPR015880 Pfam:PF00641 Pfam:PF01585
PROSITE:PS00028 PROSITE:PS01358 PROSITE:PS50102 PROSITE:PS50157
PROSITE:PS50174 PROSITE:PS50199 SMART:SM00355 SMART:SM00360
SMART:SM00443 SMART:SM00547 GO:GO:0005634 GO:GO:0006915
GO:GO:0000166 GO:GO:0046872 GO:GO:0008270 GO:GO:0003729
Gene3D:3.30.70.330 GO:GO:0005681 GO:GO:0043065
GeneTree:ENSGT00510000046476 GO:GO:0000245 GO:GO:0000381
eggNOG:NOG290849 HOVERGEN:HBG000318 KO:K13094 HOGENOM:HOG000046285
EMBL:BC114706 IPI:IPI00731526 RefSeq:NP_001039839.1
UniGene:Bt.76139 ProteinModelPortal:Q1RMU5 STRING:Q1RMU5
PRIDE:Q1RMU5 Ensembl:ENSBTAT00000008305 GeneID:534216
KEGG:bta:534216 CTD:10181 InParanoid:Q1RMU5 OMA:TADSYKD
OrthoDB:EOG4VT5WV NextBio:20876310 Uniprot:Q1RMU5
Length = 815
Score = 454 (164.9 bits), Expect = 3.4e-42, P = 3.4e-42
Identities = 102/221 (46%), Positives = 142/221 (64%)
Query: 43 VVGNNREEKT-KKSLVAAY--ESDEEPEVQEETVSGEEKQQIDWDKLACLICKRQFNSKD 99
+V N E+ K+ LVAAY +SD E E+ E S EEK DW K+ACL+C+RQF +KD
Sbjct: 602 LVRNGDEDNPLKRGLVAAYSGDSDNEEELVERLESEEEKLA-DWKKMACLLCRRQFPNKD 660
Query: 100 ILKKHTQLSELHKSNLKMWYTCR----NLDPNDAVHRAVQYRDRAKERRLKYGEPEVPPA 155
L +H QLS+LHK N+ ++ R L+ + R ++YRDRA ERR KYG PE PP
Sbjct: 661 ALVRHQQLSDLHKQNMDIYRRSRLSEQELEALELREREMKYRDRAAERREKYGIPE-PPE 719
Query: 156 CKLKAKYSKVKEATVTFEEPTKKGIGADNVGNKLLQKMGWTQGQGLGKTNQGRTSIIEAE 215
K K ++ TV +E+PTK GI N+GNK+LQ MGW +G GLG+ QG T+ IEA+
Sbjct: 720 PKRKKQFDA---GTVNYEQPTKDGIDHSNIGNKMLQAMGWREGSGLGRKCQGITAPIEAQ 776
Query: 216 ARISSAGLGT--NAIGMTPAPGETYKDCVKKMMRARYSQID 254
R+ AGLG +A G++ A ++YKD V+K M AR+++++
Sbjct: 777 VRLKGAGLGAKGSAYGLSGA--DSYKDAVRKAMFARFTEME 815
>UNIPROTKB|E2QUP3 [details] [associations]
symbol:RBM5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003729 "mRNA binding" evidence=IEA] [GO:0000381 "regulation of
alternative mRNA splicing, via spliceosome" evidence=IEA]
[GO:0000245 "spliceosomal complex assembly" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR000467
InterPro:IPR000504 InterPro:IPR001876 InterPro:IPR007087
InterPro:IPR012677 InterPro:IPR015880 Pfam:PF00641 Pfam:PF01585
PROSITE:PS01358 PROSITE:PS50102 PROSITE:PS50157 PROSITE:PS50174
PROSITE:PS50199 SMART:SM00355 SMART:SM00360 SMART:SM00443
SMART:SM00547 GO:GO:0005634 GO:GO:0000166 GO:GO:0008270
GO:GO:0003729 Gene3D:3.30.70.330 GO:GO:0043065
GeneTree:ENSGT00510000046476 GO:GO:0000245 GO:GO:0000381 KO:K13094
CTD:10181 OMA:TADSYKD EMBL:AAEX03012225 RefSeq:XP_861224.2
ProteinModelPortal:E2QUP3 Ensembl:ENSCAFT00000017309 GeneID:476618
KEGG:cfa:476618 NextBio:20852241 Uniprot:E2QUP3
Length = 815
Score = 454 (164.9 bits), Expect = 3.4e-42, P = 3.4e-42
Identities = 102/221 (46%), Positives = 142/221 (64%)
Query: 43 VVGNNREEKT-KKSLVAAY--ESDEEPEVQEETVSGEEKQQIDWDKLACLICKRQFNSKD 99
+V N EE K+ LVAAY +SD E E+ E S EEK DW K+ACL+C+RQF ++D
Sbjct: 602 LVRNGDEENPLKRGLVAAYSGDSDNEEELVERLESEEEKLA-DWKKMACLLCRRQFPNRD 660
Query: 100 ILKKHTQLSELHKSNLKMWYTCR----NLDPNDAVHRAVQYRDRAKERRLKYGEPEVPPA 155
L +H QLS+LHK N+ ++ R L+ + R ++YRDRA ERR KYG PE PP
Sbjct: 661 ALVRHQQLSDLHKQNMDIYRRSRLSEQELEALELREREMKYRDRAAERREKYGIPE-PPE 719
Query: 156 CKLKAKYSKVKEATVTFEEPTKKGIGADNVGNKLLQKMGWTQGQGLGKTNQGRTSIIEAE 215
K K ++ TV +E+PTK GI N+GNK+LQ MGW +G GLG+ QG T+ IEA+
Sbjct: 720 PKRKKQFDA---GTVNYEQPTKDGIDHSNIGNKMLQAMGWREGSGLGRKCQGITAPIEAQ 776
Query: 216 ARISSAGLGT--NAIGMTPAPGETYKDCVKKMMRARYSQID 254
R+ AGLG +A G++ A ++YKD V+K M AR+++++
Sbjct: 777 VRLKGAGLGAKGSAYGLSGA--DSYKDAVRKAMFARFTEME 815
>MGI|MGI:1933204 [details] [associations]
symbol:Rbm5 "RNA binding motif protein 5" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0000245 "spliceosomal complex assembly" evidence=ISO]
[GO:0000381 "regulation of alternative mRNA splicing, via
spliceosome" evidence=ISO] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0003729
"mRNA binding" evidence=ISO] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISO] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0006915 "apoptotic process" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0043065 "positive regulation of
apoptotic process" evidence=ISO] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR000467 InterPro:IPR000504
InterPro:IPR001876 InterPro:IPR007087 InterPro:IPR012677
InterPro:IPR015880 Pfam:PF00641 Pfam:PF01585 PROSITE:PS00028
PROSITE:PS01358 PROSITE:PS50102 PROSITE:PS50157 PROSITE:PS50174
PROSITE:PS50199 SMART:SM00355 SMART:SM00360 SMART:SM00443
SMART:SM00547 MGI:MGI:1933204 GO:GO:0005634 GO:GO:0006915
GO:GO:0000166 GO:GO:0046872 GO:GO:0008270 GO:GO:0003729
Gene3D:3.30.70.330 GO:GO:0005681 GO:GO:0043065
GeneTree:ENSGT00510000046476 PDB:2CLV PDB:2OL3 PDBsum:2CLV
PDBsum:2OL3 GO:GO:0000245 GO:GO:0000381 eggNOG:NOG290849
HOVERGEN:HBG000318 KO:K13094 HOGENOM:HOG000046285 CTD:10181
OMA:TADSYKD OrthoDB:EOG4VT5WV EMBL:AJ309168 EMBL:AK134183
EMBL:AK146880 EMBL:BC003988 EMBL:BC023854 EMBL:BC031899
EMBL:BC043058 EMBL:BC054729 IPI:IPI00130160 IPI:IPI00798508
RefSeq:NP_683732.1 UniGene:Mm.259197 ProteinModelPortal:Q91YE7
SMR:Q91YE7 STRING:Q91YE7 PhosphoSite:Q91YE7 PaxDb:Q91YE7
PRIDE:Q91YE7 Ensembl:ENSMUST00000035199 GeneID:83486 KEGG:mmu:83486
UCSC:uc009rmv.2 UCSC:uc009rmw.2 InParanoid:Q91YE7
EvolutionaryTrace:Q91YE7 NextBio:350596 Bgee:Q91YE7 CleanEx:MM_RBM5
Genevestigator:Q91YE7 GermOnline:ENSMUSG00000032580 Uniprot:Q91YE7
Length = 815
Score = 454 (164.9 bits), Expect = 3.4e-42, P = 3.4e-42
Identities = 102/221 (46%), Positives = 142/221 (64%)
Query: 43 VVGNNREEKT-KKSLVAAY--ESDEEPEVQEETVSGEEKQQIDWDKLACLICKRQFNSKD 99
+V N EE K+ LVAAY +SD E E+ E S EEK DW K+ACL+C+RQF ++D
Sbjct: 602 LVRNGDEENPLKRGLVAAYSGDSDNEEELVERLESEEEKLA-DWKKMACLLCRRQFPNRD 660
Query: 100 ILKKHTQLSELHKSNLKMWYTCR----NLDPNDAVHRAVQYRDRAKERRLKYGEPEVPPA 155
L +H QLS+LHK N+ ++ R L+ + R ++YRDRA ERR KYG PE PP
Sbjct: 661 ALVRHQQLSDLHKQNMDIYRRSRLSEQELEALELREREMKYRDRAAERREKYGIPE-PPE 719
Query: 156 CKLKAKYSKVKEATVTFEEPTKKGIGADNVGNKLLQKMGWTQGQGLGKTNQGRTSIIEAE 215
K K ++ TV +E+PTK GI N+GNK+LQ MGW +G GLG+ QG T+ IEA+
Sbjct: 720 PKRKKQFDA---GTVNYEQPTKDGIDHSNIGNKMLQAMGWREGSGLGRKCQGITAPIEAQ 776
Query: 216 ARISSAGLGT--NAIGMTPAPGETYKDCVKKMMRARYSQID 254
R+ AGLG +A G++ A ++YKD V+K M AR+++++
Sbjct: 777 VRLKGAGLGAKGSAYGLSGA--DSYKDAVRKAMFARFTEME 815
>RGD|1305059 [details] [associations]
symbol:Rbm5 "RNA binding motif protein 5" species:10116 "Rattus
norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0000245 "spliceosomal complex assembly" evidence=ISO;ISS]
[GO:0000381 "regulation of alternative mRNA splicing, via
spliceosome" evidence=ISO;ISS] [GO:0003729 "mRNA binding"
evidence=ISO;ISS] [GO:0005634 "nucleus" evidence=ISO;ISS]
[GO:0005681 "spliceosomal complex" evidence=IEA] [GO:0006915
"apoptotic process" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=ISO;ISS] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR000467 InterPro:IPR000504 InterPro:IPR001876
InterPro:IPR007087 InterPro:IPR012677 InterPro:IPR015880
Pfam:PF00641 Pfam:PF01585 PROSITE:PS00028 PROSITE:PS01358
PROSITE:PS50102 PROSITE:PS50157 PROSITE:PS50174 PROSITE:PS50199
SMART:SM00355 SMART:SM00360 SMART:SM00443 SMART:SM00547 RGD:1305059
GO:GO:0005634 GO:GO:0006915 GO:GO:0000166 GO:GO:0046872
GO:GO:0008270 GO:GO:0003729 Gene3D:3.30.70.330 GO:GO:0005681
GO:GO:0043065 EMBL:CH473954 GeneTree:ENSGT00510000046476
GO:GO:0000245 GO:GO:0000381 eggNOG:NOG290849 KO:K13094
HOGENOM:HOG000046285 CTD:10181 OrthoDB:EOG4VT5WV EMBL:BC166477
IPI:IPI00193008 RefSeq:NP_001094018.1 UniGene:Rn.17033
ProteinModelPortal:B2GV05 STRING:B2GV05 PhosphoSite:B2GV05
PRIDE:B2GV05 Ensembl:ENSRNOT00000024529 GeneID:300996
KEGG:rno:300996 UCSC:RGD:1305059 NextBio:647878 ArrayExpress:B2GV05
Genevestigator:B2GV05 Uniprot:B2GV05
Length = 815
Score = 454 (164.9 bits), Expect = 3.4e-42, P = 3.4e-42
Identities = 102/221 (46%), Positives = 142/221 (64%)
Query: 43 VVGNNREEKT-KKSLVAAY--ESDEEPEVQEETVSGEEKQQIDWDKLACLICKRQFNSKD 99
+V N EE K+ LVAAY +SD E E+ E S EEK DW K+ACL+C+RQF ++D
Sbjct: 602 LVRNGDEENPLKRGLVAAYSGDSDNEEELVERLESEEEKLA-DWKKMACLLCRRQFPNRD 660
Query: 100 ILKKHTQLSELHKSNLKMWYTCR----NLDPNDAVHRAVQYRDRAKERRLKYGEPEVPPA 155
L +H QLS+LHK N+ ++ R L+ + R ++YRDRA ERR KYG PE PP
Sbjct: 661 ALVRHQQLSDLHKQNMDIYRRSRLSEQELEALELREREMKYRDRAAERREKYGIPE-PPE 719
Query: 156 CKLKAKYSKVKEATVTFEEPTKKGIGADNVGNKLLQKMGWTQGQGLGKTNQGRTSIIEAE 215
K K ++ TV +E+PTK GI N+GNK+LQ MGW +G GLG+ QG T+ IEA+
Sbjct: 720 PKRKKQFDA---GTVNYEQPTKDGIDHSNIGNKMLQAMGWREGSGLGRKCQGITAPIEAQ 776
Query: 216 ARISSAGLGT--NAIGMTPAPGETYKDCVKKMMRARYSQID 254
R+ AGLG +A G++ A ++YKD V+K M AR+++++
Sbjct: 777 VRLKGAGLGAKGSAYGLSGA--DSYKDAVRKAMFARFTEME 815
>FB|FBgn0031318 [details] [associations]
symbol:CG4887 species:7227 "Drosophila melanogaster"
[GO:0003729 "mRNA binding" evidence=ISS] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC]
[GO:0071011 "precatalytic spliceosome" evidence=IDA]
InterPro:IPR000467 InterPro:IPR000504 InterPro:IPR001876
InterPro:IPR007087 InterPro:IPR012677 InterPro:IPR015880
Pfam:PF01585 PROSITE:PS01358 PROSITE:PS50102 PROSITE:PS50157
PROSITE:PS50174 PROSITE:PS50199 SMART:SM00355 SMART:SM00360
SMART:SM00443 SMART:SM00547 GO:GO:0000166 GO:GO:0008270
GO:GO:0003729 Gene3D:3.30.70.330 GO:GO:0071011 GO:GO:0000398
eggNOG:NOG290849 EMBL:AY070653 ProteinModelPortal:Q8SZM4 SMR:Q8SZM4
STRING:Q8SZM4 PaxDb:Q8SZM4 PRIDE:Q8SZM4 FlyBase:FBgn0031318
InParanoid:Q8SZM4 OrthoDB:EOG498SFS ArrayExpress:Q8SZM4 Bgee:Q8SZM4
Uniprot:Q8SZM4
Length = 1004
Score = 392 (143.0 bits), Expect = 2.3e-41, Sum P(2) = 2.3e-41
Identities = 82/180 (45%), Positives = 114/180 (63%)
Query: 76 EEKQQIDWDKLACLICKRQFNSKDILKKHTQLSELHKSNLKMWYTCRNLDPNDAVHRAVQ 135
EE +D+ KL CL+CKR F S ++L+KH ++S LHK NL N + + ++ A+
Sbjct: 828 EESDYVDFHKLTCLLCKRAFQSLEVLQKHLKMSTLHKENLAKL----NQNTSSSIEEALA 883
Query: 136 YRDRAKERRLKYGEPEVPPACKLKAKYSK-VKEATVTFEEPTKKG----IGADNVGNKLL 190
YRDRAKERRLKYGE + PP + + ++ + +K ++ T I + NVG++LL
Sbjct: 884 YRDRAKERRLKYGESDPPPPNRSRERFEQEIKTLQSRQKQSTSATPAMPISSSNVGSRLL 943
Query: 191 QKMGWTQGQGLGKTNQGRTSIIEAEARISSAGLGTNAIGMTPAPGETYKDCVKKMMRARY 250
QKMGW++GQGLG+ NQGRT IIEA+ R + GLG N G PG YK +KKMM+ RY
Sbjct: 944 QKMGWSEGQGLGRKNQGRTQIIEADGRSNYVGLG-NKSGQM-IPGNDYKSYIKKMMKQRY 1001
Score = 85 (35.0 bits), Expect = 2.3e-41, Sum P(2) = 2.3e-41
Identities = 23/56 (41%), Positives = 34/56 (60%)
Query: 1 MEKWAKTLNHRKEISKVANNTEQAASE--SPSQSTQGS-ADVCFSVVGNNREEKTK 53
MEKWAK LN +K+ + VA A+E + S+ QG ADV FS++ ++E+ K
Sbjct: 725 MEKWAKQLNQKKDYTAVATPQPILANEVATTSRGNQGGYADVGFSIL--EKKERGK 778
Score = 37 (18.1 bits), Expect = 2.6e-36, Sum P(2) = 2.6e-36
Identities = 23/86 (26%), Positives = 36/86 (41%)
Query: 13 EISKVANNTEQAASES-PSQSTQGSADVCFSVVGNNREEKTKKSLVAAYESDEEPEVQEE 71
E+ KV N E A Q T S + F V N E+ K+ + + ++ +E
Sbjct: 276 ELIKV--NMEPACIRIIRKQGTDSSRGIAF--VEFNTVEEAKQWMDI---TQGVLKLNDE 328
Query: 72 TVSGE--EKQQIDWDKLACLICKRQF 95
VS K+ DW+ C +C +F
Sbjct: 329 RVSMRYSHKRIQDWNCYKCGVCNFKF 354
>FB|FBgn0031319 [details] [associations]
symbol:CG4896 species:7227 "Drosophila melanogaster"
[GO:0003729 "mRNA binding" evidence=ISS] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR000467
InterPro:IPR000504 InterPro:IPR001876 InterPro:IPR012677
InterPro:IPR015880 Pfam:PF01585 PROSITE:PS01358 PROSITE:PS50102
PROSITE:PS50174 PROSITE:PS50199 SMART:SM00355 SMART:SM00360
SMART:SM00443 SMART:SM00547 EMBL:AE014134 GO:GO:0000166
GO:GO:0008270 GO:GO:0003729 Gene3D:3.30.70.330 GO:GO:0005622
GeneTree:ENSGT00510000046476 KO:K13094 OMA:QCNEPRA
FlyBase:FBgn0031319 GenomeRNAi:33305 NextBio:782948
UniGene:Dm.30757 GeneID:33305 KEGG:dme:Dmel_CG4896
RefSeq:NP_722689.2 ProteinModelPortal:Q8IPW6 SMR:Q8IPW6
STRING:Q8IPW6 EnsemblMetazoa:FBtr0077970 UCSC:CG4896-RC
InParanoid:Q8IPW6 PhylomeDB:Q8IPW6 ArrayExpress:Q8IPW6 Bgee:Q8IPW6
Uniprot:Q8IPW6
Length = 968
Score = 395 (144.1 bits), Expect = 4.1e-41, Sum P(2) = 4.1e-41
Identities = 85/191 (44%), Positives = 113/191 (59%)
Query: 65 EPEVQEETVSGEEKQQIDWDKLACLICKRQFNSKDILKKHTQLSELHKSNLKMWYTCRNL 124
E V + +E +D+ KL CL+C R F S DIL+KH ++S LHK NL RN
Sbjct: 779 EASVGTKRAISDESDYVDFQKLTCLLCMRAFQSLDILQKHLKMSNLHKENLDKLK--RNP 836
Query: 125 DPNDAVHRAVQYRDRAKERRLKYGEPEVPPACKLKAKYSK-VKEATV----TFEEPTKKG 179
+ YRDRAKERRLKYGE + PP + + ++ + +K +F
Sbjct: 837 AVEAGTDEGLSYRDRAKERRLKYGESDPPPPNRSRERFEQEIKTLQSRQKDSFGATAAMP 896
Query: 180 IGADNVGNKLLQKMGWTQGQGLGKTNQGRTSIIEAEARISSAGLGTNAIGMTPAPGETYK 239
I + NVG++L+QKMGW++GQGLGK NQGRT IIEA+ R ++ GLG N M APG YK
Sbjct: 897 ISSTNVGSRLMQKMGWSEGQGLGKKNQGRTEIIEADGRSNNVGLGNNTGHM--APGNDYK 954
Query: 240 DCVKKMMRARY 250
+KKMM+ RY
Sbjct: 955 SYIKKMMKQRY 965
Score = 79 (32.9 bits), Expect = 4.1e-41, Sum P(2) = 4.1e-41
Identities = 22/51 (43%), Positives = 34/51 (66%)
Query: 1 MEKWAKTLNHRKEISKVA------NNTEQAASESPSQSTQGS-ADVCFSVV 44
MEKWAK LN +K+ + VA ++TE A + S+++QG+ ADV FS++
Sbjct: 687 MEKWAKQLNQKKDYTAVATPQPILSDTEAATT---SRASQGAYADVGFSIL 734
>UNIPROTKB|E1BXK5 [details] [associations]
symbol:E1BXK5 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0000245
"spliceosomal complex assembly" evidence=IEA] [GO:0000381
"regulation of alternative mRNA splicing, via spliceosome"
evidence=IEA] [GO:0003729 "mRNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0043065 "positive regulation of
apoptotic process" evidence=IEA] InterPro:IPR000467
InterPro:IPR000504 InterPro:IPR001876 InterPro:IPR007087
InterPro:IPR012677 InterPro:IPR015880 Pfam:PF00641 Pfam:PF01585
PROSITE:PS01358 PROSITE:PS50102 PROSITE:PS50157 PROSITE:PS50174
PROSITE:PS50199 SMART:SM00355 SMART:SM00360 SMART:SM00443
SMART:SM00547 GO:GO:0005634 GO:GO:0000166 GO:GO:0008270
GO:GO:0003729 Gene3D:3.30.70.330 GO:GO:0043065
GeneTree:ENSGT00510000046476 GO:GO:0000245 GO:GO:0000381
OMA:TADSYKD EMBL:AADN02056427 EMBL:AADN02056428 EMBL:AADN02056429
IPI:IPI00585702 Ensembl:ENSGALT00000007370 Uniprot:E1BXK5
Length = 810
Score = 431 (156.8 bits), Expect = 1.1e-39, P = 1.1e-39
Identities = 106/277 (38%), Positives = 159/277 (57%)
Query: 1 MEKWAKTLNHRKEISKVANNTEQAASESPSQSTQGSADVCF-----------SVVG---- 45
ME+WAK+LN +KE K N+ + ++ + +AD F SV+G
Sbjct: 542 MERWAKSLNKQKENFK--NSFQPLSTREEERKESAAADAGFALFEKKVRLVRSVLGACLH 599
Query: 46 NNREEKTKKSLVAAYESDEE-PEVQEETVSGEEKQQIDWDKLACLICKRQFNSKDILKKH 104
N + LVAAY D + E E + EE++ DW K+ACL+C+RQF +KD L +H
Sbjct: 600 NGCTHPLLRGLVAAYSGDSDNDEDLLERMENEEEKLTDWKKMACLLCRRQFPNKDALIRH 659
Query: 105 TQLSELHKSNLKMWYTCR----NLDPNDAVHRAVQYRDRAKERRLKYGEPEVPPACKLKA 160
QLS+LHK N+ ++ + L+ + R ++YRDRA ERR KYG PE PP K K
Sbjct: 660 QQLSDLHKQNMDIYRRSKLSEQELEALELREREMKYRDRAAERREKYGIPE-PPEPKRKK 718
Query: 161 KYSKVKEATVTFEEPTKKGIGADNVGNKLLQKMGWTQGQGLGKTNQGRTSIIE---AEAR 217
Y TV +E+PTK G+ N+GNK+LQ MGW +G GLG+ QG T+ IE A +
Sbjct: 719 VYDA---GTVNYEQPTKDGLDNSNIGNKMLQAMGWREGSGLGRKCQGITAPIEGGMAGFK 775
Query: 218 ISSAGLGTNAIGMTPAPGETYKDCVKKMMRARYSQID 254
++ G +++ G++ A ++YKD V+K M AR+++++
Sbjct: 776 PAAVGFVSSSYGVSTA--DSYKDAVRKAMFARFTEME 810
>UNIPROTKB|F1MFZ9 [details] [associations]
symbol:RBM10 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0070935 "3'-UTR-mediated mRNA stabilization"
evidence=IEA] [GO:0034393 "positive regulation of smooth muscle
cell apoptotic process" evidence=IEA] [GO:0008285 "negative
regulation of cell proliferation" evidence=IEA] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR000467 InterPro:IPR000504
InterPro:IPR007087 InterPro:IPR012677 InterPro:IPR015880
Pfam:PF01585 PROSITE:PS50102 PROSITE:PS50157 PROSITE:PS50174
SMART:SM00355 SMART:SM00360 SMART:SM00443 GO:GO:0000166
GO:GO:0008270 Gene3D:3.30.70.330 GO:GO:0003676
GeneTree:ENSGT00510000046476 GO:GO:0016585 OMA:NQHSLNI
EMBL:DAAA02073014 EMBL:DAAA02073009 EMBL:DAAA02073010
EMBL:DAAA02073011 EMBL:DAAA02073012 EMBL:DAAA02073013
IPI:IPI00999955 Ensembl:ENSBTAT00000003758 Uniprot:F1MFZ9
Length = 996
Score = 425 (154.7 bits), Expect = 8.5e-39, P = 8.5e-39
Identities = 89/207 (42%), Positives = 131/207 (63%)
Query: 54 KSLVAAYESDEEPEVQEETVSGEEKQQI-DWDKLACLICKRQFNSKDILKKHTQLSELHK 112
+ LVAAY + + E ++E E ++++ DW KLACL+C+RQF SK+ L +H QLS LHK
Sbjct: 792 RGLVAAYSGESDSEEEQERGGPEREEKLTDWQKLACLLCRRQFPSKEALIRHQQLSGLHK 851
Query: 113 SNLKMW---YTCRN----LDPNDAVHRAVQYRDRAKERRLKYGEPEVPPACKLKAKYSKV 165
NL++ + N L+ ND ++YRDRA ERR KYG PE PP K + KYS +
Sbjct: 852 QNLEIHRRAHLSENELEALEKNDM--EQMKYRDRAAERREKYGIPE-PPEPK-RRKYSGM 907
Query: 166 KEATVTFEEPTKKGIGADNVGNKLLQKMGWTQGQGLGKTNQGRTSIIEAEARISSAGLGT 225
A+V FE+PT+ G+G+DN+G+++LQ MGW +G GLG+ QG + IEA+ R+ +GLG
Sbjct: 908 SAASVDFEQPTRDGLGSDNIGSRMLQAMGWKEGSGLGRKKQGIVTPIEAQTRVRGSGLGA 967
Query: 226 NAIGMTPAPGETYKDCVKKMMRARYSQ 252
E+YK+ + K M R+++
Sbjct: 968 RGSSYGVTSTESYKETLHKTMVTRFNE 994
>RGD|631366 [details] [associations]
symbol:Rbm10 "RNA binding motif protein 10" species:10116 "Rattus
norvegicus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=IEA;ISO] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA;ISO] [GO:0034391 "regulation of smooth muscle cell
apoptotic process" evidence=ISO] [GO:0034393 "positive regulation
of smooth muscle cell apoptotic process" evidence=IEA;ISO]
[GO:0070935 "3'-UTR-mediated mRNA stabilization" evidence=IEA;ISO]
[GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR000467
InterPro:IPR000504 InterPro:IPR001876 InterPro:IPR007087
InterPro:IPR012677 InterPro:IPR015880 Pfam:PF00641 Pfam:PF01585
PROSITE:PS01358 PROSITE:PS50102 PROSITE:PS50157 PROSITE:PS50174
PROSITE:PS50199 SMART:SM00355 SMART:SM00360 SMART:SM00443
SMART:SM00547 RGD:631366 GO:GO:0000166 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.70.330 GO:GO:0003723 GO:GO:0016585 CTD:8241
eggNOG:NOG290849 HOVERGEN:HBG000318 KO:K13094 EMBL:D83948
IPI:IPI00189558 RefSeq:NP_690600.1 UniGene:Rn.8822
ProteinModelPortal:P70501 PhosphoSite:P70501 PRIDE:P70501
GeneID:64510 KEGG:rno:64510 UCSC:RGD:631366 NextBio:613290
Genevestigator:P70501 Uniprot:P70501
Length = 852
Score = 423 (154.0 bits), Expect = 9.2e-39, P = 9.2e-39
Identities = 88/207 (42%), Positives = 130/207 (62%)
Query: 54 KSLVAAYESDEEPEVQEETVSGEEKQQI-DWDKLACLICKRQFNSKDILKKHTQLSELHK 112
+ LVAAY + + E ++E E ++++ DW KLACL+C+RQF SK+ L +H QLS LHK
Sbjct: 648 RGLVAAYSGESDSEEEQERGGPEREEKLTDWQKLACLLCRRQFPSKEALIRHQQLSGLHK 707
Query: 113 SNLKMW---YTCRN----LDPNDAVHRAVQYRDRAKERRLKYGEPEVPPACKLKAKYSKV 165
NL++ + N L+ ND ++YRDRA ERR KYG PE PP K + KY +
Sbjct: 708 QNLEIHRRAHLSENELEALEKNDM--EQMKYRDRAAERREKYGIPE-PPEPK-RRKYGGI 763
Query: 166 KEATVTFEEPTKKGIGADNVGNKLLQKMGWTQGQGLGKTNQGRTSIIEAEARISSAGLGT 225
A+V FE+PT+ G+G+DN+G+++LQ MGW +G GLG+ QG + IEA+ R+ +GLG
Sbjct: 764 STASVDFEQPTRDGLGSDNIGSRMLQAMGWKEGSGLGRKKQGIVTPIEAQTRVRGSGLGA 823
Query: 226 NAIGMTPAPGETYKDCVKKMMRARYSQ 252
E+YK+ + K M R+++
Sbjct: 824 RGSSYGVTSTESYKETLHKTMVTRFNE 850
>UNIPROTKB|P70501 [details] [associations]
symbol:Rbm10 "RNA-binding protein 10" species:10116 "Rattus
norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR000467
InterPro:IPR000504 InterPro:IPR001876 InterPro:IPR007087
InterPro:IPR012677 InterPro:IPR015880 Pfam:PF00641 Pfam:PF01585
PROSITE:PS01358 PROSITE:PS50102 PROSITE:PS50157 PROSITE:PS50174
PROSITE:PS50199 SMART:SM00355 SMART:SM00360 SMART:SM00443
SMART:SM00547 RGD:631366 GO:GO:0000166 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.70.330 GO:GO:0003723 GO:GO:0016585 CTD:8241
eggNOG:NOG290849 HOVERGEN:HBG000318 KO:K13094 EMBL:D83948
IPI:IPI00189558 RefSeq:NP_690600.1 UniGene:Rn.8822
ProteinModelPortal:P70501 PhosphoSite:P70501 PRIDE:P70501
GeneID:64510 KEGG:rno:64510 UCSC:RGD:631366 NextBio:613290
Genevestigator:P70501 Uniprot:P70501
Length = 852
Score = 423 (154.0 bits), Expect = 9.2e-39, P = 9.2e-39
Identities = 88/207 (42%), Positives = 130/207 (62%)
Query: 54 KSLVAAYESDEEPEVQEETVSGEEKQQI-DWDKLACLICKRQFNSKDILKKHTQLSELHK 112
+ LVAAY + + E ++E E ++++ DW KLACL+C+RQF SK+ L +H QLS LHK
Sbjct: 648 RGLVAAYSGESDSEEEQERGGPEREEKLTDWQKLACLLCRRQFPSKEALIRHQQLSGLHK 707
Query: 113 SNLKMW---YTCRN----LDPNDAVHRAVQYRDRAKERRLKYGEPEVPPACKLKAKYSKV 165
NL++ + N L+ ND ++YRDRA ERR KYG PE PP K + KY +
Sbjct: 708 QNLEIHRRAHLSENELEALEKNDM--EQMKYRDRAAERREKYGIPE-PPEPK-RRKYGGI 763
Query: 166 KEATVTFEEPTKKGIGADNVGNKLLQKMGWTQGQGLGKTNQGRTSIIEAEARISSAGLGT 225
A+V FE+PT+ G+G+DN+G+++LQ MGW +G GLG+ QG + IEA+ R+ +GLG
Sbjct: 764 STASVDFEQPTRDGLGSDNIGSRMLQAMGWKEGSGLGRKKQGIVTPIEAQTRVRGSGLGA 823
Query: 226 NAIGMTPAPGETYKDCVKKMMRARYSQ 252
E+YK+ + K M R+++
Sbjct: 824 RGSSYGVTSTESYKETLHKTMVTRFNE 850
>UNIPROTKB|J9P453 [details] [associations]
symbol:RBM10 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR000467 InterPro:IPR000504
InterPro:IPR001876 InterPro:IPR007087 InterPro:IPR012677
InterPro:IPR015880 Pfam:PF00641 Pfam:PF01585 PROSITE:PS01358
PROSITE:PS50102 PROSITE:PS50157 PROSITE:PS50174 PROSITE:PS50199
SMART:SM00355 SMART:SM00360 SMART:SM00443 SMART:SM00547
GO:GO:0000166 GO:GO:0008270 Gene3D:3.30.70.330 GO:GO:0003676
GO:GO:0005622 GeneTree:ENSGT00510000046476 EMBL:AAEX03026316
EMBL:AAEX03026318 EMBL:AAEX03026317 Ensembl:ENSCAFT00000046659
Uniprot:J9P453
Length = 768
Score = 421 (153.3 bits), Expect = 1.1e-38, P = 1.1e-38
Identities = 88/207 (42%), Positives = 130/207 (62%)
Query: 54 KSLVAAYESDEEPEVQEETVSGEEKQQI-DWDKLACLICKRQFNSKDILKKHTQLSELHK 112
+ LVAAY + + E ++E E ++++ DW KLACL+C+RQF SK+ L +H QLS LHK
Sbjct: 564 RGLVAAYSGESDSEEEQERGGPEREEKLTDWQKLACLLCRRQFPSKEALIRHQQLSGLHK 623
Query: 113 SNLKMW---YTCRN----LDPNDAVHRAVQYRDRAKERRLKYGEPEVPPACKLKAKYSKV 165
NL++ + N L+ ND ++YRDRA ERR KYG PE PP K + KY +
Sbjct: 624 QNLEIHRRAHLSENELEALEKNDM--EQMKYRDRAAERREKYGIPE-PPEPK-RRKYGGM 679
Query: 166 KEATVTFEEPTKKGIGADNVGNKLLQKMGWTQGQGLGKTNQGRTSIIEAEARISSAGLGT 225
A+V FE+PT+ G+G+DN+G+++LQ MGW +G GLG+ QG + IEA+ R+ +GLG
Sbjct: 680 SAASVDFEQPTRDGLGSDNIGSRMLQAMGWKEGSGLGRKKQGIVTPIEAQTRVRGSGLGA 739
Query: 226 NAIGMTPAPGETYKDCVKKMMRARYSQ 252
E+YK+ + K M R+++
Sbjct: 740 RGSSYGVTSTESYKETLHKTMVTRFNE 766
>UNIPROTKB|F1RWX6 [details] [associations]
symbol:LOC100525622 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0070935 "3'-UTR-mediated mRNA stabilization"
evidence=IEA] [GO:0034393 "positive regulation of smooth muscle
cell apoptotic process" evidence=IEA] [GO:0008285 "negative
regulation of cell proliferation" evidence=IEA] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR000467 InterPro:IPR000504
InterPro:IPR007087 InterPro:IPR012677 InterPro:IPR015880
Pfam:PF01585 PROSITE:PS50102 PROSITE:PS50157 PROSITE:PS50174
SMART:SM00355 SMART:SM00360 SMART:SM00443 GO:GO:0000166
GO:GO:0008270 Gene3D:3.30.70.330 GO:GO:0003676
GeneTree:ENSGT00510000046476 GO:GO:0016585 OMA:NQHSLNI
EMBL:FP710256 Ensembl:ENSSSCT00000013419 Uniprot:F1RWX6
Length = 788
Score = 421 (153.3 bits), Expect = 1.2e-38, P = 1.2e-38
Identities = 88/207 (42%), Positives = 130/207 (62%)
Query: 54 KSLVAAYESDEEPEVQEETVSGEEKQQI-DWDKLACLICKRQFNSKDILKKHTQLSELHK 112
+ LVAAY + + E ++E E ++++ DW KLACL+C+RQF SK+ L +H QLS LHK
Sbjct: 584 RGLVAAYSGESDSEEEQERGGPEREEKLTDWQKLACLLCRRQFPSKEALIRHQQLSGLHK 643
Query: 113 SNLKMW---YTCRN----LDPNDAVHRAVQYRDRAKERRLKYGEPEVPPACKLKAKYSKV 165
NL++ + N L+ ND ++YRDRA ERR KYG PE PP K + KY +
Sbjct: 644 QNLEIHRRAHLSENELEALEKNDM--EQMKYRDRAAERREKYGIPE-PPEPK-RRKYGGM 699
Query: 166 KEATVTFEEPTKKGIGADNVGNKLLQKMGWTQGQGLGKTNQGRTSIIEAEARISSAGLGT 225
A+V FE+PT+ G+G+DN+G+++LQ MGW +G GLG+ QG + IEA+ R+ +GLG
Sbjct: 700 SAASVDFEQPTRDGLGSDNIGSRMLQAMGWKEGSGLGRKKQGIVTPIEAQTRVRGSGLGA 759
Query: 226 NAIGMTPAPGETYKDCVKKMMRARYSQ 252
E+YK+ + K M R+++
Sbjct: 760 RGSSYGVTSTESYKETLHKTMVTRFNE 786
>UNIPROTKB|F1LWM0 [details] [associations]
symbol:F1LWM0 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR000467 InterPro:IPR000504
InterPro:IPR001876 InterPro:IPR007087 InterPro:IPR012677
InterPro:IPR015880 Pfam:PF00641 Pfam:PF01585 PROSITE:PS01358
PROSITE:PS50102 PROSITE:PS50157 PROSITE:PS50174 PROSITE:PS50199
SMART:SM00355 SMART:SM00360 SMART:SM00443 SMART:SM00547
GO:GO:0000166 GO:GO:0008270 Gene3D:3.30.70.330 GO:GO:0003676
GO:GO:0016585 IPI:IPI00557539 Ensembl:ENSRNOT00000040618
ArrayExpress:F1LWM0 Uniprot:F1LWM0
Length = 929
Score = 423 (154.0 bits), Expect = 1.2e-38, P = 1.2e-38
Identities = 88/207 (42%), Positives = 130/207 (62%)
Query: 54 KSLVAAYESDEEPEVQEETVSGEEKQQI-DWDKLACLICKRQFNSKDILKKHTQLSELHK 112
+ LVAAY + + E ++E E ++++ DW KLACL+C+RQF SK+ L +H QLS LHK
Sbjct: 725 RGLVAAYSGESDSEEEQERGGPEREEKLTDWQKLACLLCRRQFPSKEALIRHQQLSGLHK 784
Query: 113 SNLKMW---YTCRN----LDPNDAVHRAVQYRDRAKERRLKYGEPEVPPACKLKAKYSKV 165
NL++ + N L+ ND ++YRDRA ERR KYG PE PP K + KY +
Sbjct: 785 QNLEIHRRAHLSENELEALEKNDM--EQMKYRDRAAERREKYGIPE-PPEPK-RRKYGGI 840
Query: 166 KEATVTFEEPTKKGIGADNVGNKLLQKMGWTQGQGLGKTNQGRTSIIEAEARISSAGLGT 225
A+V FE+PT+ G+G+DN+G+++LQ MGW +G GLG+ QG + IEA+ R+ +GLG
Sbjct: 841 STASVDFEQPTRDGLGSDNIGSRMLQAMGWKEGSGLGRKKQGIVTPIEAQTRVRGSGLGA 900
Query: 226 NAIGMTPAPGETYKDCVKKMMRARYSQ 252
E+YK+ + K M R+++
Sbjct: 901 RGSSYGVTSTESYKETLHKTMVTRFNE 927
>UNIPROTKB|P98175 [details] [associations]
symbol:RBM10 "RNA-binding protein 10" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IEA] [GO:0034393 "positive regulation of
smooth muscle cell apoptotic process" evidence=IEA] [GO:0070935
"3'-UTR-mediated mRNA stabilization" evidence=IEA] [GO:0003723 "RNA
binding" evidence=NAS] [GO:0005634 "nucleus" evidence=IDA;NAS]
[GO:0008150 "biological_process" evidence=ND] [GO:0005730
"nucleolus" evidence=IDA] InterPro:IPR000467 InterPro:IPR000504
InterPro:IPR001876 InterPro:IPR007087 InterPro:IPR012677
InterPro:IPR015880 Pfam:PF00641 Pfam:PF01585 PROSITE:PS01358
PROSITE:PS50102 PROSITE:PS50157 PROSITE:PS50174 PROSITE:PS50199
SMART:SM00355 SMART:SM00360 SMART:SM00443 SMART:SM00547
GO:GO:0008380 GO:GO:0000166 GO:GO:0046872 GO:GO:0008270
GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0003723 GO:GO:0016585
EMBL:CH471164 EMBL:AL513366 EMBL:D50912 EMBL:AK292758 EMBL:AL137421
EMBL:BC003089 EMBL:BC004181 EMBL:BC008733 EMBL:BC024153 EMBL:U35373
IPI:IPI00375731 IPI:IPI00549342 IPI:IPI00915253 IPI:IPI00916428
RefSeq:NP_001191395.1 RefSeq:NP_001191396.1 RefSeq:NP_005667.2
RefSeq:NP_690595.1 UniGene:Hs.401509 PDB:2LXI PDB:2M2B PDBsum:2LXI
PDBsum:2M2B ProteinModelPortal:P98175 SMR:P98175 IntAct:P98175
MINT:MINT-2864879 STRING:P98175 PhosphoSite:P98175 DMDM:218512116
PaxDb:P98175 PRIDE:P98175 DNASU:8241 Ensembl:ENST00000329236
Ensembl:ENST00000345781 Ensembl:ENST00000377604 GeneID:8241
KEGG:hsa:8241 UCSC:uc004dhf.3 UCSC:uc004dhg.3 UCSC:uc004dhh.3
UCSC:uc010nhq.3 CTD:8241 GeneCards:GC0XP047004 HGNC:HGNC:9896
HPA:HPA034972 MIM:300080 MIM:311900 neXtProt:NX_P98175
Orphanet:2886 PharmGKB:PA34259 eggNOG:NOG290849 HOVERGEN:HBG000318
InParanoid:P98175 KO:K13094 OMA:NQHSLNI OrthoDB:EOG4DZ1TN
PhylomeDB:P98175 ChiTaRS:RBM10 GenomeRNAi:8241 NextBio:30996
Bgee:P98175 CleanEx:HS_RBM10 Genevestigator:P98175
GermOnline:ENSG00000182872 Uniprot:P98175
Length = 930
Score = 423 (154.0 bits), Expect = 1.2e-38, P = 1.2e-38
Identities = 88/207 (42%), Positives = 130/207 (62%)
Query: 54 KSLVAAYESDEEPEVQEETVSGEEKQQI-DWDKLACLICKRQFNSKDILKKHTQLSELHK 112
+ LVAAY + + E ++E E ++++ DW KLACL+C+RQF SK+ L +H QLS LHK
Sbjct: 726 RGLVAAYSGESDSEEEQERGGPEREEKLTDWQKLACLLCRRQFPSKEALIRHQQLSGLHK 785
Query: 113 SNLKMW---YTCRN----LDPNDAVHRAVQYRDRAKERRLKYGEPEVPPACKLKAKYSKV 165
NL++ + N L+ ND ++YRDRA ERR KYG PE PP K + KY +
Sbjct: 786 QNLEIHRRAHLSENELEALEKNDM--EQMKYRDRAAERREKYGIPE-PPEPK-RRKYGGI 841
Query: 166 KEATVTFEEPTKKGIGADNVGNKLLQKMGWTQGQGLGKTNQGRTSIIEAEARISSAGLGT 225
A+V FE+PT+ G+G+DN+G+++LQ MGW +G GLG+ QG + IEA+ R+ +GLG
Sbjct: 842 STASVDFEQPTRDGLGSDNIGSRMLQAMGWKEGSGLGRKKQGIVTPIEAQTRVRGSGLGA 901
Query: 226 NAIGMTPAPGETYKDCVKKMMRARYSQ 252
E+YK+ + K M R+++
Sbjct: 902 RGSSYGVTSTESYKETLHKTMVTRFNE 928
>MGI|MGI:2384310 [details] [associations]
symbol:Rbm10 "RNA binding motif protein 10" species:10090
"Mus musculus" [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IGI;IDA] [GO:0034391 "regulation of smooth muscle cell
apoptotic process" evidence=IGI] [GO:0034393 "positive regulation
of smooth muscle cell apoptotic process" evidence=IDA] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0070935 "3'-UTR-mediated mRNA
stabilization" evidence=IDA] InterPro:IPR000467 InterPro:IPR000504
InterPro:IPR001876 InterPro:IPR007087 InterPro:IPR012677
InterPro:IPR015880 Pfam:PF00641 Pfam:PF01585 PROSITE:PS01358
PROSITE:PS50102 PROSITE:PS50157 PROSITE:PS50174 PROSITE:PS50199
SMART:SM00355 SMART:SM00360 SMART:SM00443 SMART:SM00547
MGI:MGI:2384310 GO:GO:0008285 GO:GO:0000166 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.70.330 GO:GO:0003723 GO:GO:0000122
GeneTree:ENSGT00510000046476 GO:GO:0034393 GO:GO:0016585
GO:GO:0070935 HSSP:P08199 CTD:8241 eggNOG:NOG290849
HOVERGEN:HBG000318 KO:K13094 OrthoDB:EOG4DZ1TN EMBL:AK122208
EMBL:AK089105 EMBL:AK145991 EMBL:AK153736 EMBL:AK167666
EMBL:AL672073 EMBL:AL807240 EMBL:BC004674 IPI:IPI00116031
IPI:IPI00468834 IPI:IPI00776254 RefSeq:NP_001161247.1
RefSeq:NP_001161248.1 RefSeq:NP_663602.1 UniGene:Mm.279194
UniGene:Mm.383632 UniGene:Mm.475412 ProteinModelPortal:Q99KG3
SMR:Q99KG3 STRING:Q99KG3 PhosphoSite:Q99KG3 PaxDb:Q99KG3
PRIDE:Q99KG3 Ensembl:ENSMUST00000064911 Ensembl:ENSMUST00000082089
Ensembl:ENSMUST00000084383 Ensembl:ENSMUST00000115374
Ensembl:ENSMUST00000115375 Ensembl:ENSMUST00000177738 GeneID:236732
KEGG:mmu:236732 UCSC:uc009stf.2 UCSC:uc009sth.2 UCSC:uc009sti.2
HOGENOM:HOG000046285 InParanoid:Q99KG3 NextBio:383047 Bgee:Q99KG3
Genevestigator:Q99KG3 Uniprot:Q99KG3
Length = 930
Score = 423 (154.0 bits), Expect = 1.2e-38, P = 1.2e-38
Identities = 88/207 (42%), Positives = 130/207 (62%)
Query: 54 KSLVAAYESDEEPEVQEETVSGEEKQQI-DWDKLACLICKRQFNSKDILKKHTQLSELHK 112
+ LVAAY + + E ++E E ++++ DW KLACL+C+RQF SK+ L +H QLS LHK
Sbjct: 726 RGLVAAYSGESDSEEEQERGGPEREEKLTDWQKLACLLCRRQFPSKEALIRHQQLSGLHK 785
Query: 113 SNLKMW---YTCRN----LDPNDAVHRAVQYRDRAKERRLKYGEPEVPPACKLKAKYSKV 165
NL++ + N L+ ND ++YRDRA ERR KYG PE PP K + KY +
Sbjct: 786 QNLEIHRRAHLSENELEALEKNDM--EQMKYRDRAAERREKYGIPE-PPEPK-RRKYGGI 841
Query: 166 KEATVTFEEPTKKGIGADNVGNKLLQKMGWTQGQGLGKTNQGRTSIIEAEARISSAGLGT 225
A+V FE+PT+ G+G+DN+G+++LQ MGW +G GLG+ QG + IEA+ R+ +GLG
Sbjct: 842 STASVDFEQPTRDGLGSDNIGSRMLQAMGWKEGSGLGRKKQGIVTPIEAQTRVRGSGLGA 901
Query: 226 NAIGMTPAPGETYKDCVKKMMRARYSQ 252
E+YK+ + K M R+++
Sbjct: 902 RGSSYGVTSTESYKETLHKTMVTRFNE 928
>UNIPROTKB|F1PDM2 [details] [associations]
symbol:RBM10 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR000467 InterPro:IPR000504
InterPro:IPR007087 InterPro:IPR012677 InterPro:IPR015880
Pfam:PF01585 PROSITE:PS50102 PROSITE:PS50157 PROSITE:PS50174
SMART:SM00355 SMART:SM00360 SMART:SM00443 GO:GO:0000166
GO:GO:0008270 Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0005622
GeneTree:ENSGT00510000046476 OMA:NQHSLNI EMBL:AAEX03026316
EMBL:AAEX03026318 EMBL:AAEX03026317 Ensembl:ENSCAFT00000023612
Uniprot:F1PDM2
Length = 995
Score = 421 (153.3 bits), Expect = 2.3e-38, P = 2.3e-38
Identities = 88/207 (42%), Positives = 130/207 (62%)
Query: 54 KSLVAAYESDEEPEVQEETVSGEEKQQI-DWDKLACLICKRQFNSKDILKKHTQLSELHK 112
+ LVAAY + + E ++E E ++++ DW KLACL+C+RQF SK+ L +H QLS LHK
Sbjct: 791 RGLVAAYSGESDSEEEQERGGPEREEKLTDWQKLACLLCRRQFPSKEALIRHQQLSGLHK 850
Query: 113 SNLKMW---YTCRN----LDPNDAVHRAVQYRDRAKERRLKYGEPEVPPACKLKAKYSKV 165
NL++ + N L+ ND ++YRDRA ERR KYG PE PP K + KY +
Sbjct: 851 QNLEIHRRAHLSENELEALEKNDM--EQMKYRDRAAERREKYGIPE-PPEPK-RRKYGGM 906
Query: 166 KEATVTFEEPTKKGIGADNVGNKLLQKMGWTQGQGLGKTNQGRTSIIEAEARISSAGLGT 225
A+V FE+PT+ G+G+DN+G+++LQ MGW +G GLG+ QG + IEA+ R+ +GLG
Sbjct: 907 SAASVDFEQPTRDGLGSDNIGSRMLQAMGWKEGSGLGRKKQGIVTPIEAQTRVRGSGLGA 966
Query: 226 NAIGMTPAPGETYKDCVKKMMRARYSQ 252
E+YK+ + K M R+++
Sbjct: 967 RGSSYGVTSTESYKETLHKTMVTRFNE 993
>UNIPROTKB|Q6DDU9 [details] [associations]
symbol:rbm5-b "RNA-binding protein 5-B" species:8355
"Xenopus laevis" [GO:0000245 "spliceosomal complex assembly"
evidence=ISS] [GO:0000381 "regulation of alternative mRNA splicing,
via spliceosome" evidence=ISS] [GO:0003729 "mRNA binding"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0043065
"positive regulation of apoptotic process" evidence=ISS]
InterPro:IPR000467 InterPro:IPR000504 InterPro:IPR001876
InterPro:IPR012677 Pfam:PF00641 Pfam:PF01585 PROSITE:PS01358
PROSITE:PS50102 PROSITE:PS50174 PROSITE:PS50199 SMART:SM00360
SMART:SM00443 SMART:SM00547 GO:GO:0005634 GO:GO:0000166
GO:GO:0046872 GO:GO:0008270 GO:GO:0003729 Gene3D:3.30.70.330
GO:GO:0005681 GO:GO:0043065 GO:GO:0000245 GO:GO:0000381 KO:K13094
EMBL:BC077408 RefSeq:NP_001086761.1 UniGene:Xl.19852 HSSP:O95218
ProteinModelPortal:Q6DDU9 GeneID:446596 KEGG:xla:446596 CTD:446596
Xenbase:XB-GENE-6256678 Uniprot:Q6DDU9
Length = 749
Score = 274 (101.5 bits), Expect = 1.3e-27, Sum P(2) = 1.3e-27
Identities = 57/120 (47%), Positives = 76/120 (63%)
Query: 135 QYRDRAKERRLKYGEPEVPPACKLKAKYSKVKEATVTFEEPTKKGIGADNVGNKLLQKMG 194
+YRDRA ERR KYG PE PP K K + V +E+PTK GI N+GNK+LQ MG
Sbjct: 635 KYRDRAAERREKYGIPE-PPEPKRK----RFDPTVVNYEQPTKDGIDNSNIGNKMLQAMG 689
Query: 195 WTQGQGLGKTNQGRTSIIEAEARISSAGLGTNAIGMTPAPGETYKDCVKKMMRARYSQID 254
W +G GLG+ +QG T+ I+A+ R+ AGLG ++YKD VKK M AR+S+++
Sbjct: 690 WKEGSGLGRKSQGITAPIQAQVRMRGAGLGAKGSSYGVNTSDSYKDAVKKAMFARFSEME 749
Score = 70 (29.7 bits), Expect = 1.3e-27, Sum P(2) = 1.3e-27
Identities = 23/79 (29%), Positives = 41/79 (51%)
Query: 1 MEKWAKTLNHRKEISKVANNTEQAASESPSQSTQGSADVCFSVVGNNREEKTKKSLVAAY 60
ME+WAK+LN +KE K N+ + +S + +AD F++ EK + +L +
Sbjct: 562 MERWAKSLNKQKENFK--NSFQPLSSRDEERKESAAADAGFALF-----EKKQGAL---F 611
Query: 61 ESDEEPEVQEETVSGEEKQ 79
E P++ V+ EE++
Sbjct: 612 ERQFLPDMMMMMVNTEEEK 630
>UNIPROTKB|E1BZU3 [details] [associations]
symbol:RBM6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000467 InterPro:IPR000504 InterPro:IPR001876
InterPro:IPR012677 InterPro:IPR015880 Pfam:PF01585 PROSITE:PS01358
PROSITE:PS50174 SMART:SM00355 SMART:SM00360 SMART:SM00443
SMART:SM00547 GO:GO:0005634 GO:GO:0000166 GO:GO:0008270
Gene3D:3.30.70.330 GO:GO:0003676 GeneTree:ENSGT00510000046476
OMA:YDLDFRG EMBL:AADN02056480 EMBL:AADN02056481 EMBL:AADN02056482
IPI:IPI00819472 Ensembl:ENSGALT00000004643 Uniprot:E1BZU3
Length = 1119
Score = 295 (108.9 bits), Expect = 8.7e-25, P = 8.7e-25
Identities = 73/217 (33%), Positives = 117/217 (53%)
Query: 46 NNREEKTKKSLVAAYESDEEPEVQEE----TVSGEEKQQIDWDKLACLICKRQFNSKDIL 101
+N EE+ ++ S P +EE +G++K DW+KLACL+C+RQF +K++L
Sbjct: 914 DNEEEEEEEEQAQWLPSPHPPAQREEQPRRAKAGDDKLT-DWNKLACLLCRRQFPNKEVL 972
Query: 102 KKHTQLSELHKSNLKMWYTCRNLDPNDAV----HRAVQYRDRAKERRLKYGEPEVPPACK 157
KH QLS LHK NL++ + + A R +Y+D+ +RR K+ + + P +
Sbjct: 973 IKHQQLSNLHKQNLEIHMKIKRSEQELAYLEKREREGRYKDKGNDRREKFQQMDSPE--R 1030
Query: 158 LKAKYSKVKEATVTFEEPTKKGIGADNVGNKLLQKMGWTQGQGLGKTNQGRTSIIEAEAR 217
+ +Y + E+ +P I ++N GN++LQ GW +G G QG TS +EAE R
Sbjct: 1031 KRFRYDRGPESDY---DPR---IDSNNKGNRMLQSTGWKKG--FGHNQQGTTSPMEAENR 1082
Query: 218 ISSAGLGTNAIGMTPAPGETYKDCVKKMMRARYSQID 254
GLG ETY+D V+++M ARY +++
Sbjct: 1083 KRGPGLGAQGRPNRRQSNETYRDAVRRVMFARYKELE 1119
>UNIPROTKB|E2R8Z4 [details] [associations]
symbol:RBM6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000467 InterPro:IPR000504 InterPro:IPR012677
InterPro:IPR015880 Pfam:PF01585 PROSITE:PS50102 PROSITE:PS50174
SMART:SM00355 SMART:SM00360 SMART:SM00443 GO:GO:0005634
GO:GO:0000166 GO:GO:0008270 Gene3D:3.30.70.330 GO:GO:0003676
GeneTree:ENSGT00510000046476 CTD:10180 OMA:YDLDFRG
EMBL:AAEX03012225 EMBL:AAEX03012226 RefSeq:XP_850379.1
Ensembl:ENSCAFT00000017370 GeneID:608064 KEGG:cfa:608064
NextBio:20893742 Uniprot:E2R8Z4
Length = 1122
Score = 286 (105.7 bits), Expect = 8.0e-24, P = 8.0e-24
Identities = 69/212 (32%), Positives = 116/212 (54%)
Query: 49 EEKTKKSLVAAYESDEEPEVQEETVSGEEKQQI-DWDKLACLICKRQFNSKDILKKHTQL 107
EE+ +++ + + P+ +E T E+ ++ DW+KLACL+C+RQF +K++L KH QL
Sbjct: 916 EEEEEQTPPPQPRTTQPPQREELTKKENEEDKLTDWNKLACLLCRRQFPNKEVLIKHQQL 975
Query: 108 SELHKSNLKMWYTCRNLDPNDA-VHRAVQ---YRDRAKERRLKYGEPEVPPACKLKAKYS 163
S+LHK NL++ + + A + R Q +++R +RR K + P + + KYS
Sbjct: 976 SDLHKQNLEIHRKIKQSEQELAYLERREQEGRFKERGNDRREKLQSFDSPE--RKRIKYS 1033
Query: 164 KVKEATVTFEEPT-KKGIGADNVGNKLLQKMGWTQGQGLGKTNQGRTSIIEAEARISSAG 222
+ ++ +P K+GI + N G + Q GW +G GLG + G S E E R+
Sbjct: 1034 RETDSD---RKPVGKEGIDSSNKGGCVQQTSGWRKGAGLGYGHPGLASAEETEGRMRGPS 1090
Query: 223 LGTNAIGMTPAPGETYKDCVKKMMRARYSQID 254
+G ETY+D V+++M ARY ++D
Sbjct: 1091 VGAPGRTSKRQSNETYRDAVRRVMFARYKELD 1122
>UNIPROTKB|B4DNY1 [details] [associations]
symbol:RBM6 "cDNA FLJ60318, highly similar to RNA-binding
protein 6" species:9606 "Homo sapiens" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR000467
InterPro:IPR012677 InterPro:IPR015880 Pfam:PF01585 PROSITE:PS50174
SMART:SM00355 SMART:SM00443 GO:GO:0005634 GO:GO:0000166
GO:GO:0008270 Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AC105935
EMBL:AC104450 UniGene:Hs.696735 HGNC:HGNC:9903 ChiTaRS:RBM6
EMBL:AK298108 IPI:IPI00926778 SMR:B4DNY1 STRING:B4DNY1
Ensembl:ENST00000539992 UCSC:uc011bdi.2 HOVERGEN:HBG067411
Uniprot:B4DNY1
Length = 465
Score = 277 (102.6 bits), Expect = 8.7e-24, P = 8.7e-24
Identities = 67/212 (31%), Positives = 110/212 (51%)
Query: 49 EEKTKKSLVAAYESDEEPEVQEETVS--GEEKQQIDWDKLACLICKRQFNSKDILKKHTQ 106
EE+ ++ +P+ +EE EE + DW+KLACL+C+RQF +K++L KH Q
Sbjct: 258 EEEEEEQTPPPQPRTAQPQKREEQTKKENEEDKLTDWNKLACLLCRRQFPNKEVLIKHQQ 317
Query: 107 LSELHKSNLKMWYTCRNLDPNDAV----HRAVQYRDRAKERRLKYGEPEVPPACKLKAKY 162
LS+LHK NL++ + + A R +++ R +RR K + P + + KY
Sbjct: 318 LSDLHKQNLEIHRKIKQSEQELAYLERREREGKFKGRGNDRREKLQSFDSPE--RKRIKY 375
Query: 163 SKVKEATVTFEEPTKKGIGADNVGNKLLQKMGWTQGQGLGKTNQGRTSIIEAEARISSAG 222
S+ ++ + K+ I + G + Q GW +G GLG + G S EAE R+
Sbjct: 376 SRETDSDRKLVD--KEDIDTSSKGGCVQQATGWRKGTGLGYGHPGLASSEEAEGRMRGPS 433
Query: 223 LGTNAIGMTPAPGETYKDCVKKMMRARYSQID 254
+G + ETY+D V+++M ARY ++D
Sbjct: 434 VGASGRTSKRQSNETYRDAVRRVMFARYKELD 465
>UNIPROTKB|E1BC65 [details] [associations]
symbol:RBM6 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000467 InterPro:IPR000504 InterPro:IPR012677
InterPro:IPR015880 PROSITE:PS50102 PROSITE:PS50174 SMART:SM00355
SMART:SM00443 GO:GO:0005634 GO:GO:0000166 GO:GO:0008270
Gene3D:3.30.70.330 GO:GO:0003676 GeneTree:ENSGT00510000046476
OMA:YDLDFRG EMBL:DAAA02054416 EMBL:DAAA02054415 IPI:IPI00715714
Ensembl:ENSBTAT00000008300 Uniprot:E1BC65
Length = 1120
Score = 284 (105.0 bits), Expect = 1.3e-23, P = 1.3e-23
Identities = 67/212 (31%), Positives = 116/212 (54%)
Query: 49 EEKTKKSLVAAYESDEEPEVQEETVSGEEKQQI-DWDKLACLICKRQFNSKDILKKHTQL 107
EE+ +++ + + P+ +E T E+ ++ DW+KLACL+C+RQF +K++L KH QL
Sbjct: 914 EEEEEQTPPPQPRTAQPPQREELTKKENEEDKLTDWNKLACLLCRRQFPNKEVLIKHQQL 973
Query: 108 SELHKSNLKMWYTCRNLDPNDAV----HRAVQYRDRAKERRLKYGEPEVPPACKLKAKYS 163
S+LHK NL++ + + A R ++++R +RR K + P + + KYS
Sbjct: 974 SDLHKQNLEIHRKIKQSEQELAYLERREREGRFKERGNDRREKLQSLDSPE--RKRIKYS 1031
Query: 164 KVKEATVTFEEPT-KKGIGADNVGNKLLQKMGWTQGQGLGKTNQGRTSIIEAEARISSAG 222
+ ++ +P K+GI + + G + Q GW +G GLG + G S E E+R+
Sbjct: 1032 RETDSD---RKPVGKEGINSSSTGGYVQQATGWRKGAGLGYGHPGLGSAEETESRMRGPN 1088
Query: 223 LGTNAIGMTPAPGETYKDCVKKMMRARYSQID 254
+G ETY+D V+++M ARY ++D
Sbjct: 1089 VGAPGRTSKRQSNETYRDAVRRVMFARYKELD 1120
>UNIPROTKB|F1SPQ9 [details] [associations]
symbol:RBM6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000467 InterPro:IPR000504 InterPro:IPR012677
InterPro:IPR015880 Pfam:PF01585 PROSITE:PS50102 PROSITE:PS50174
SMART:SM00355 SMART:SM00360 SMART:SM00443 GO:GO:0005634
GO:GO:0000166 GO:GO:0008270 Gene3D:3.30.70.330 GO:GO:0003676
GeneTree:ENSGT00510000046476 CTD:10180 OMA:YDLDFRG EMBL:CU861627
EMBL:FP085495 RefSeq:XP_003483235.1 Ensembl:ENSSSCT00000012472
GeneID:100515053 KEGG:ssc:100515053 Uniprot:F1SPQ9
Length = 1120
Score = 281 (104.0 bits), Expect = 2.7e-23, P = 2.7e-23
Identities = 69/213 (32%), Positives = 113/213 (53%)
Query: 49 EEKTKKSLVAAYESDEEPEVQEETVS--GEEKQQIDWDKLACLICKRQFNSKDILKKHTQ 106
EE+ ++ +P+ +EE + EE++ DW+KLACL+C+RQF +K++L KH Q
Sbjct: 914 EEEEEEQTPPPQPRTAQPQ-REEVIKKENEEEKLTDWNKLACLLCRRQFPNKEVLIKHQQ 972
Query: 107 LSELHKSNLKMWYTCRNLDPNDAV----HRAVQYRDRAKERRLKYGEPEVPPACKLKAKY 162
LS+LHK NL++ + + A R ++++R +RR K + P + + KY
Sbjct: 973 LSDLHKQNLEIHRKIKQSEQELAYLERREREGRFKERGNDRREKLQSFDSPE--RKRIKY 1030
Query: 163 SKVKEATVTFEEPT-KKGIGADNVGNKLLQKMGWTQGQGLGKTNQGRTSIIEAEARISSA 221
S+ ++ +P K+GI + G + Q GW +G GLG + G S E E RI
Sbjct: 1031 SRETDSD---RKPVGKEGIDNSSKGGCVQQATGWRKGTGLGYGHLGLASAEETEGRIRGP 1087
Query: 222 GLGTNAIGMTPAPGETYKDCVKKMMRARYSQID 254
+G ETY+D V+++M ARY ++D
Sbjct: 1088 SVGAPGRTSKRQSNETYRDAVRRVMFARYKELD 1120
>UNIPROTKB|E9PGM9 [details] [associations]
symbol:RBM6 "RNA-binding protein 6" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000467 InterPro:IPR000504 InterPro:IPR012677
InterPro:IPR015880 Pfam:PF01585 PROSITE:PS50102 PROSITE:PS50174
SMART:SM00355 SMART:SM00360 SMART:SM00443 GO:GO:0005634
GO:GO:0000166 GO:GO:0008270 Gene3D:3.30.70.330 GO:GO:0003676
EMBL:AC105935 EMBL:AC104450 HGNC:HGNC:9903 ChiTaRS:RBM6
IPI:IPI00927608 ProteinModelPortal:E9PGM9 SMR:E9PGM9
Ensembl:ENST00000443081 ArrayExpress:E9PGM9 Bgee:E9PGM9
Uniprot:E9PGM9
Length = 991
Score = 277 (102.6 bits), Expect = 6.0e-23, P = 6.0e-23
Identities = 67/212 (31%), Positives = 110/212 (51%)
Query: 49 EEKTKKSLVAAYESDEEPEVQEETVS--GEEKQQIDWDKLACLICKRQFNSKDILKKHTQ 106
EE+ ++ +P+ +EE EE + DW+KLACL+C+RQF +K++L KH Q
Sbjct: 784 EEEEEEQTPPPQPRTAQPQKREEQTKKENEEDKLTDWNKLACLLCRRQFPNKEVLIKHQQ 843
Query: 107 LSELHKSNLKMWYTCRNLDPNDAV----HRAVQYRDRAKERRLKYGEPEVPPACKLKAKY 162
LS+LHK NL++ + + A R +++ R +RR K + P + + KY
Sbjct: 844 LSDLHKQNLEIHRKIKQSEQELAYLERREREGKFKGRGNDRREKLQSFDSPE--RKRIKY 901
Query: 163 SKVKEATVTFEEPTKKGIGADNVGNKLLQKMGWTQGQGLGKTNQGRTSIIEAEARISSAG 222
S+ ++ + K+ I + G + Q GW +G GLG + G S EAE R+
Sbjct: 902 SRETDSDRKLVD--KEDIDTSSKGGCVQQATGWRKGTGLGYGHPGLASSEEAEGRMRGPS 959
Query: 223 LGTNAIGMTPAPGETYKDCVKKMMRARYSQID 254
+G + ETY+D V+++M ARY ++D
Sbjct: 960 VGASGRTSKRQSNETYRDAVRRVMFARYKELD 991
>UNIPROTKB|P78332 [details] [associations]
symbol:RBM6 "RNA-binding protein 6" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003677 "DNA
binding" evidence=TAS] [GO:0006396 "RNA processing" evidence=TAS]
InterPro:IPR000467 InterPro:IPR000504 InterPro:IPR012677
InterPro:IPR015880 Pfam:PF01585 PROSITE:PS50102 PROSITE:PS50174
SMART:SM00355 SMART:SM00360 SMART:SM00443 GO:GO:0005634
GO:GO:0000166 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.70.330
GO:GO:0003676 GO:GO:0003723 GO:GO:0006396 EMBL:AC105935
EMBL:AF042857 EMBL:AF069517 EMBL:AF091264 EMBL:U50839 EMBL:AC104450
EMBL:BC046643 IPI:IPI00297723 IPI:IPI00793735 RefSeq:NP_001161054.1
RefSeq:NP_005768.1 UniGene:Hs.696735 ProteinModelPortal:P78332
SMR:P78332 IntAct:P78332 STRING:P78332 PhosphoSite:P78332
DMDM:116242749 PaxDb:P78332 PRIDE:P78332 DNASU:10180
Ensembl:ENST00000266022 Ensembl:ENST00000422955
Ensembl:ENST00000442092 GeneID:10180 KEGG:hsa:10180 UCSC:uc003cyc.3
CTD:10180 GeneCards:GC03P049952 HGNC:HGNC:9903 HPA:HPA026272
HPA:HPA027164 MIM:606886 neXtProt:NX_P78332 PharmGKB:PA34268
eggNOG:NOG319164 HOGENOM:HOG000133022 HOVERGEN:HBG007537
InParanoid:P78332 OMA:YDLDFRG PhylomeDB:P78332 ChiTaRS:RBM6
GenomeRNAi:10180 NextBio:38538 ArrayExpress:P78332 Bgee:P78332
CleanEx:HS_RBM6 Genevestigator:P78332 GermOnline:ENSG00000004534
Uniprot:P78332
Length = 1123
Score = 277 (102.6 bits), Expect = 7.3e-23, P = 7.3e-23
Identities = 67/212 (31%), Positives = 110/212 (51%)
Query: 49 EEKTKKSLVAAYESDEEPEVQEETVS--GEEKQQIDWDKLACLICKRQFNSKDILKKHTQ 106
EE+ ++ +P+ +EE EE + DW+KLACL+C+RQF +K++L KH Q
Sbjct: 916 EEEEEEQTPPPQPRTAQPQKREEQTKKENEEDKLTDWNKLACLLCRRQFPNKEVLIKHQQ 975
Query: 107 LSELHKSNLKMWYTCRNLDPNDAV----HRAVQYRDRAKERRLKYGEPEVPPACKLKAKY 162
LS+LHK NL++ + + A R +++ R +RR K + P + + KY
Sbjct: 976 LSDLHKQNLEIHRKIKQSEQELAYLERREREGKFKGRGNDRREKLQSFDSPE--RKRIKY 1033
Query: 163 SKVKEATVTFEEPTKKGIGADNVGNKLLQKMGWTQGQGLGKTNQGRTSIIEAEARISSAG 222
S+ ++ + K+ I + G + Q GW +G GLG + G S EAE R+
Sbjct: 1034 SRETDSDRKLVD--KEDIDTSSKGGCVQQATGWRKGTGLGYGHPGLASSEEAEGRMRGPS 1091
Query: 223 LGTNAIGMTPAPGETYKDCVKKMMRARYSQID 254
+G + ETY+D V+++M ARY ++D
Sbjct: 1092 VGASGRTSKRQSNETYRDAVRRVMFARYKELD 1123
>WB|WBGene00020346 [details] [associations]
symbol:T08B2.5 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0000003 "reproduction" evidence=IMP]
InterPro:IPR000467 InterPro:IPR000504 InterPro:IPR001876
InterPro:IPR012677 InterPro:IPR015880 Pfam:PF01585 PROSITE:PS01358
PROSITE:PS50102 PROSITE:PS50174 PROSITE:PS50199 SMART:SM00355
SMART:SM00443 SMART:SM00547 GO:GO:0000166 GO:GO:0008270
Gene3D:3.30.70.330 GO:GO:0000003 GO:GO:0003676 GO:GO:0005622
GeneTree:ENSGT00510000046476 KO:K13094 EMBL:FO080899
UniGene:Cel.5094 GeneID:172312 KEGG:cel:CELE_T08B2.5 UCSC:T08B2.5c
CTD:172312 HOGENOM:HOG000019748 NextBio:874967 PIR:T28754
RefSeq:NP_491793.1 ProteinModelPortal:Q9BIC2 SMR:Q9BIC2
IntAct:Q9BIC2 MINT:MINT-1114302 STRING:Q9BIC2 PRIDE:Q9BIC2
EnsemblMetazoa:T08B2.5b WormBase:T08B2.5b InParanoid:Q9BIC2
OMA:GDDWICA ArrayExpress:Q9BIC2 Uniprot:Q9BIC2
Length = 925
Score = 179 (68.1 bits), Expect = 8.4e-22, Sum P(2) = 8.4e-22
Identities = 44/123 (35%), Positives = 68/123 (55%)
Query: 134 VQYRDRAKERRLKYGEPEVPPACKLKAKY---SKVK-EATV--TFEEPTKKGIGADNVGN 187
+ YRDRAKERR ++G A + + V+ E T+ EE +K+ + N+GN
Sbjct: 800 IVYRDRAKERRRQFGIDSTGYAFDVMGGPPGPTSVRHEETIRKVSEEASKRPLDESNIGN 859
Query: 188 KLLQKMGWTQGQGLGKTNQGRTSIIEAEARISSAGLGTNAIGMTPAPGETYKDCVKKMMR 247
+LL+ MGW +GQG+GK QG + IEAE + AGLG M ++K+ ++ +
Sbjct: 860 RLLKSMGWKEGQGVGKHAQGIVNPIEAERFVQGAGLGAAGSKMRHGAEASHKEKTRQALY 919
Query: 248 ARY 250
+RY
Sbjct: 920 SRY 922
Score = 134 (52.2 bits), Expect = 8.4e-22, Sum P(2) = 8.4e-22
Identities = 35/117 (29%), Positives = 56/117 (47%)
Query: 43 VVGNNREEKTKKSLVAAYESDEEPEVQEETVSGEEKQQIDWDKLACLICKRQFNSKDILK 102
V G EE + S ++ ++ E+ D K C++CKR F+ ++L+
Sbjct: 698 VRGRRSEEPSTSSSFSSVPLAPRKSTLQDVRDAMERALYDETKKTCMLCKRAFSDVEVLR 757
Query: 103 KHTQLSELHKSNLKM----W--YTCRNLDPNDAVHRA-----VQYRDRAKERRLKYG 148
KH + S+LH++NL+ W T L + A + YRDRAKERR ++G
Sbjct: 758 KHVEKSDLHRNNLEAKRAEWGRETAAKLQEEEEDASAPDLPKIVYRDRAKERRRQFG 814
Score = 57 (25.1 bits), Expect = 8.7e-14, Sum P(2) = 8.7e-14
Identities = 23/80 (28%), Positives = 36/80 (45%)
Query: 1 MEKWAKTLNHRKEISKVANNTEQAASESPSQSTQGSADVCFSVVGNNREEKTKKSLVAAY 60
M KWAK K+ KV + + + T+G + V +N ++K A +
Sbjct: 639 MAKWAK--RQEKDKKKVQISIK-------GKETKG---IELKNVFSNEKQKRIAQTAALF 686
Query: 61 ESDEEPEVQEETVSGEEKQQ 80
+ DEE E QEE V G ++
Sbjct: 687 DDDEE-EDQEEEVRGRRSEE 705
Score = 42 (19.8 bits), Expect = 3.1e-12, Sum P(2) = 3.1e-12
Identities = 16/72 (22%), Positives = 32/72 (44%)
Query: 15 SKVANNTEQAASESPSQSTQGSADVCFSVVGNNREEKTKKSLVAAYESDEEP--EVQEET 72
S+ + + S SP S GS+ +S +NR + ++S + E D + +
Sbjct: 152 SRRRRDRSHSRSRSPPSSANGSSH--WS--SSNRHSRRRRSRSYSRERDRNSRRDDRRSN 207
Query: 73 VSGEEKQQIDWD 84
+S ++ DW+
Sbjct: 208 LSNNDRYS-DWN 218
>RGD|1560367 [details] [associations]
symbol:Rbm6 "RNA binding motif protein 6" species:10116 "Rattus
norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;ISO] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR000467 InterPro:IPR000504
InterPro:IPR007087 InterPro:IPR012677 InterPro:IPR015880
PROSITE:PS50102 PROSITE:PS50157 PROSITE:PS50174 SMART:SM00355
SMART:SM00360 SMART:SM00443 RGD:1560367 GO:GO:0005634 GO:GO:0000166
GO:GO:0008270 Gene3D:3.30.70.330 GO:GO:0003676 EMBL:CH473954
GeneTree:ENSGT00510000046476 CTD:10180 OMA:YDLDFRG IPI:IPI00371062
RefSeq:NP_001101656.1 UniGene:Rn.94277 Ensembl:ENSRNOT00000024939
GeneID:315997 KEGG:rno:315997 UCSC:RGD:1560367 OrthoDB:EOG4BCDMX
NextBio:670225 Uniprot:D4ACW0
Length = 1119
Score = 263 (97.6 bits), Expect = 2.3e-21, P = 2.3e-21
Identities = 66/213 (30%), Positives = 109/213 (51%)
Query: 49 EEKTKKSLVAAYESDEEPEVQEETVS--GEEKQQIDWDKLACLICKRQFNSKDILKKHTQ 106
EE+ ++ +P+ +EE EE + DW+KLACL+C+RQF +K++L KH Q
Sbjct: 913 EEEEEEQAPPVQPRAAQPQPREELTKKENEEDKLTDWNKLACLLCRRQFPNKEVLTKHQQ 972
Query: 107 LSELHKSNLKMWYTCRNLDPNDAV----HRAVQYRDRAKERRLKYGEPEVPPACKLKAKY 162
LS+LHK NL++ + + A R +++++ +RR K + P + + KY
Sbjct: 973 LSDLHKQNLEIHRKIKQSEQELAYLERREREGRFKEKGSDRREKLQSFDSPE--RKRIKY 1030
Query: 163 SKVKEATVTFEEPT-KKGIGADNVGNKLLQKMGWTQGQGLGKTNQGRTSIIEAEARISSA 221
S+ ++ P K+ + G Q GW +G GLG ++ G S E E R+ +
Sbjct: 1031 SRETDSD---RNPVDKEDTDTSSKGGCTQQATGWRKGAGLGYSHPGLGSSEEIEGRMRGS 1087
Query: 222 GLGTNAIGMTPAPGETYKDCVKKMMRARYSQID 254
G G ETY+D V+++M ARY ++D
Sbjct: 1088 G-GAPGRTSKRQSNETYRDAVRRVMFARYKELD 1119
>ZFIN|ZDB-GENE-100922-245 [details] [associations]
symbol:si:ch73-205c16.2 "si:ch73-205c16.2"
species:7955 "Danio rerio" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR001876
InterPro:IPR007087 InterPro:IPR012677 InterPro:IPR015880
Pfam:PF00641 PROSITE:PS01358 PROSITE:PS50102 PROSITE:PS50157
PROSITE:PS50199 SMART:SM00355 SMART:SM00360 SMART:SM00547
ZFIN:ZDB-GENE-100922-245 GO:GO:0000166 GO:GO:0008270
Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0005622
GeneTree:ENSGT00510000046476 EMBL:CU927920 IPI:IPI00931142
Ensembl:ENSDART00000111456 Uniprot:F1R9N7
Length = 666
Score = 180 (68.4 bits), Expect = 7.8e-16, Sum P(2) = 7.8e-16
Identities = 40/93 (43%), Positives = 58/93 (62%)
Query: 67 EVQEETVSGEEKQQI-DWDKLACLICKRQFNSKDILKKHTQLSELHKSNLKMWYTCRNL- 124
E E S E+++++ DW KLACL+C+RQF SK+ L +H QLSELH+ NL+ + +
Sbjct: 572 ETDSEDESSEKQERLTDWCKLACLLCRRQFPSKEALIRHQQLSELHRQNLEQKRSRTTVS 631
Query: 125 DPNDAVHRAVQYRDRAKERRLKYGEPEVPPACK 157
+ + ++YRDRA ERR K P+ P A K
Sbjct: 632 NTQEGSETELKYRDRAAERREKGIIPQQPDAKK 664
Score = 71 (30.1 bits), Expect = 7.8e-16, Sum P(2) = 7.8e-16
Identities = 16/46 (34%), Positives = 26/46 (56%)
Query: 1 MEKWAKTLNHRKEISKVANNTEQAASESPSQSTQ--GSADVCFSVV 44
ME+WAK+LN +KE + N + + S S + SAD ++V+
Sbjct: 490 MERWAKSLNRQKENGRSVNTNPRLMTHSRSDDRRESASADAGYAVL 535
>UNIPROTKB|Q2KF84 [details] [associations]
symbol:MGCH7_ch7g802 "Putative uncharacterized protein"
species:242507 "Magnaporthe oryzae 70-15" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000467
InterPro:IPR000504 InterPro:IPR001876 InterPro:IPR012677
InterPro:IPR015880 Pfam:PF01585 PROSITE:PS01358 PROSITE:PS50174
PROSITE:PS50199 SMART:SM00355 SMART:SM00360 SMART:SM00443
SMART:SM00547 GO:GO:0000166 GO:GO:0008270 Gene3D:3.30.70.330
GO:GO:0003676 GO:GO:0005622 EMBL:CM000230 ProteinModelPortal:Q2KF84
Uniprot:Q2KF84
Length = 803
Score = 182 (69.1 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 61/197 (30%), Positives = 91/197 (46%)
Query: 49 EEKTKKSLVAAYESDEEPE--VQEETVSGEEKQQI-----DWDKLACLICKRQFNSKDIL 101
EEK +++ ++ ++PE V+ T + I D D + C++C+R+F L
Sbjct: 551 EEKVRRATARLDKAGKKPETVVRRTTRDRSDPAPIYTSYADLDAIYCMLCRRRFKGLATL 610
Query: 102 KKHTQLSELHKSNLK--------------MWYTCRNLDPNDAVHRAVQYRDRAKERRLKY 147
+ H + SELH + LK + T + P ++ + QYRDRA+ERR +
Sbjct: 611 RLHERESELHVTTLKDEKRVEQAVIELVKLGKTPIQMRPKESGN---QYRDRARERRKAF 667
Query: 148 GEPEVPPACKLKAKYSKVKEATVTFEEPTKKGIGADNVGNKLLQKMGWTQGQGLGKTNQG 207
G P+ K K+ ++ K+ EE K + G LL KMGWT GQGLG G
Sbjct: 668 G-----PSTKAKSGQNQPKKDGGKKEEAAPKE-KQPSKGAALLSKMGWTAGQGLGADGSG 721
Query: 208 RTSIIEAEARISSAGLG 224
R I E GLG
Sbjct: 722 RAEAIRTEMYRPGVGLG 738
Score = 38 (18.4 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 11/47 (23%), Positives = 20/47 (42%)
Query: 12 KEISKVANNTEQAASESPSQSTQGSADVCFSVVGNNREEKTKKSLVA 58
+E S + E A+ E P + + D G ++K K+ +A
Sbjct: 406 REASPEPTSPEGASPEKPDVDSNATVDAN-GKRGKKSKDKEKEKAIA 451
>ASPGD|ASPL0000078120 [details] [associations]
symbol:AN4850 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR000467
InterPro:IPR000504 InterPro:IPR001876 InterPro:IPR007087
InterPro:IPR012677 Pfam:PF00076 Pfam:PF00641 Pfam:PF01585
PROSITE:PS01358 PROSITE:PS50102 PROSITE:PS50157 PROSITE:PS50174
PROSITE:PS50199 SMART:SM00360 SMART:SM00443 SMART:SM00547
GO:GO:0000166 GO:GO:0008270 Gene3D:3.30.70.330 GO:GO:0003676
GO:GO:0005622 EMBL:BN001303 OMA:IHAGVFV
EnsemblFungi:CADANIAT00005559 HOGENOM:HOG000194939 Uniprot:C8VA69
Length = 734
Score = 184 (69.8 bits), Expect = 1.4e-12, P = 1.4e-12
Identities = 65/247 (26%), Positives = 104/247 (42%)
Query: 12 KEISKVANNTEQAASESPSQSTQGSADVCFSVVGNNREEK--TKKSLVAAYESDEEPEVQ 69
KE S A + A+ S S + + + N E KK +D+
Sbjct: 488 KEASDKAKKRKADAASSASGTKKMAMPSHLQFWSNRHAELHGIKKDPEGKGSADQNSS-- 545
Query: 70 EETVSGEEKQQIDWDKLACLICKRQFNSKDILKKHTQLSELHKSNLK----MWYTCRNLD 125
+E + + D ++ C +C RQF + + +H +LS+LH+ NL+ + L
Sbjct: 546 DEAAAPPRQSYADPNRNCCYLCMRQFKTMAEVNRHERLSQLHRGNLQKDEVVAKATNKLI 605
Query: 126 PNDAVHRAVQYRDRAKERRLKYGEPEVPPACKLKAKYSKVKEATVTFEEPTKKGIGADNV 185
+ + + +YRDRA+ERR +G ++K + K A EP+ + +
Sbjct: 606 KHGIIPQPPEYRDRARERRQAFG----------RSKNATAKPAPPPEREPSPP-VQTTSK 654
Query: 186 GNKLLQKMGWTQGQGLGKTNQGRTSIIEAEARISSAGLGTNAIGMTPAPGETYKDCVKKM 245
G LL KMGW+ G GLG G T+ I E GLG G GE ++ +
Sbjct: 655 GASLLSKMGWSAGTGLGAQGTGMTAPITTEVYAQGVGLGAQG-GKL---GEASEEAARNT 710
Query: 246 MRARYSQ 252
R RY +
Sbjct: 711 -RNRYDE 716
>DICTYBASE|DDB_G0269006 [details] [associations]
symbol:DDB_G0269006 "D111/G-patch domain-containing
protein" species:44689 "Dictyostelium discoideum" [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000467
InterPro:IPR000504 InterPro:IPR001876 InterPro:IPR007087
InterPro:IPR012677 InterPro:IPR015880 Pfam:PF01585 PROSITE:PS01358
PROSITE:PS50102 PROSITE:PS50157 PROSITE:PS50174 SMART:SM00355
SMART:SM00360 SMART:SM00443 SMART:SM00547 dictyBase:DDB_G0269006
GO:GO:0000166 GO:GO:0008270 Gene3D:3.30.70.330 GO:GO:0003676
EMBL:AAFI02000004 GO:GO:0005622 InterPro:IPR022755 Pfam:PF12171
eggNOG:NOG290849 KO:K13094 RefSeq:XP_646990.1
ProteinModelPortal:Q55EN0 EnsemblProtists:DDB0233764 GeneID:8616683
KEGG:ddi:DDB_G0269006 InParanoid:Q55EN0 OMA:QCNEPRA
ProtClustDB:CLSZ2846940 Uniprot:Q55EN0
Length = 914
Score = 129 (50.5 bits), Expect = 3.5e-10, Sum P(2) = 3.5e-10
Identities = 28/74 (37%), Positives = 43/74 (58%)
Query: 181 GADNVGNKLLQKMGWTQGQGLGKTNQGRTSIIEAEARISSAGLGTNAIGMTPA----PGE 236
G +++G KLL+K GW QG+GLGK + G TS I+ + +GLG+ + P PG+
Sbjct: 825 GENSIGVKLLKKTGWKQGEGLGKNSDGMTSTIQVTMKTERSGLGSQT-NIDPRFVIQPGD 883
Query: 237 TYKDCVKKMMRARY 250
Y+ +KK R+
Sbjct: 884 DYQTRLKKKNFQRF 897
Score = 89 (36.4 bits), Expect = 3.5e-10, Sum P(2) = 3.5e-10
Identities = 17/43 (39%), Positives = 30/43 (69%)
Query: 74 SGEEKQQIDWDKLACLICKRQFNSKDILKKHTQLSELHKSNLK 116
S +++ +I ++ C IC R F S++ L+KH + S+LH+SNL+
Sbjct: 711 STQDQSKIVQRQIICKICDRMFISEEALRKHEKESKLHQSNLE 753
Score = 43 (20.2 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 8/22 (36%), Positives = 14/22 (63%)
Query: 117 MWYTCRNLDPNDAVHRAVQYRD 138
M Y+ +N+D N++ R Y+D
Sbjct: 1 MNYSNKNIDSNNSSSRVGSYKD 22
Score = 40 (19.1 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
Identities = 11/40 (27%), Positives = 21/40 (52%)
Query: 47 NREEKTKKSLVAAY---ESDEEPE-VQEETVSGEEKQQID 82
N + S V +Y + D++ E + E ++ EEK+ I+
Sbjct: 7 NIDSNNSSSRVGSYKDDDGDDDDEGLYEGPINDEEKKDIE 46
Score = 39 (18.8 bits), Expect = 4.8e-05, Sum P(2) = 4.8e-05
Identities = 12/41 (29%), Positives = 24/41 (58%)
Query: 46 NNREEKTK-KSLVAAYESDEEPEVQEETVSGEEKQQIDWDK 85
NN EK K K+ + E + E + +E+ + E+QQ++ ++
Sbjct: 540 NNEIEKWKLKASITEKEIENEMKQKEKELL--EQQQLEQEQ 578
>POMBASE|SPAC57A7.13 [details] [associations]
symbol:SPAC57A7.13 "RNA-binding protein, involved in
splicing (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0003723 "RNA binding" evidence=ISM] [GO:0005634 "nucleus"
evidence=IDA] [GO:0008270 "zinc ion binding" evidence=ISM]
[GO:0045292 "mRNA cis splicing, via spliceosome" evidence=NAS]
InterPro:IPR000467 InterPro:IPR000504 InterPro:IPR001876
InterPro:IPR012677 InterPro:IPR015880 Pfam:PF01585 PROSITE:PS00028
PROSITE:PS01358 PROSITE:PS50102 PROSITE:PS50157 PROSITE:PS50174
PROSITE:PS50199 SMART:SM00355 SMART:SM00360 SMART:SM00443
PomBase:SPAC57A7.13 GO:GO:0005634 EMBL:CU329670 GO:GO:0000166
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.70.330 GO:GO:0003723
GO:GO:0045292 PIR:T38941 RefSeq:NP_593368.1
ProteinModelPortal:P87143 EnsemblFungi:SPAC57A7.13.1 GeneID:2542526
KEGG:spo:SPAC57A7.13 eggNOG:NOG308443 OMA:IHAGVFV OrthoDB:EOG4HB1TR
NextBio:20803579 Uniprot:P87143
Length = 565
Score = 166 (63.5 bits), Expect = 5.4e-10, P = 5.4e-10
Identities = 64/204 (31%), Positives = 87/204 (42%)
Query: 63 DEEPEVQEETVSGEEKQQID--WDK-LACLICKRQFNSKDILKKHTQLSELHKSNLKMWY 119
D P++ EE EEK + W L C++C+R+F S + KH S +H +NLK
Sbjct: 382 DNIPDLSEE----EEKLLLHFVWKSALICVLCERKFQSWGHVVKHITQSIMHNNNLKNHE 437
Query: 120 TCRNLDPNDAVHR-----AVQYRDRAKERRLKYGEPEVPPACKLKAKYSKVKEATVTFEE 174
+ + +HR +V YRDRA ERR+ VP A +K +F
Sbjct: 438 LVSSAEL--LMHRVRQTESVDYRDRATERRI------VPAASSDTIVEAKKSSQGSSFHS 489
Query: 175 PTKKGIGADNVGNKLLQKMGWTQGQGLGKTNQGRTSIIEAEARISSAGLGTNA----IGM 230
+ NV K+L MGW +G GLG G I+ + GLG I M
Sbjct: 490 TS-------NVSMKMLNSMGWNKGSGLGTNENGIKEAIQPTMYLPGVGLGNKGSKIQINM 542
Query: 231 TPAPGETYKDCVKKMMRARYSQID 254
TP D VK R+ Y Q D
Sbjct: 543 TPV------DRVKDRARSLYFQND 560
>UNIPROTKB|J9NSS8 [details] [associations]
symbol:RBM6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR000504 InterPro:IPR012677
InterPro:IPR015880 PROSITE:PS50102 SMART:SM00355 SMART:SM00360
GO:GO:0000166 GO:GO:0008270 Gene3D:3.30.70.330 GO:GO:0003676
GO:GO:0005622 GeneTree:ENSGT00510000046476 EMBL:AAEX03012225
EMBL:AAEX03012226 Ensembl:ENSCAFT00000042862 Uniprot:J9NSS8
Length = 1047
Score = 168 (64.2 bits), Expect = 7.4e-10, P = 7.4e-10
Identities = 40/121 (33%), Positives = 71/121 (58%)
Query: 49 EEKTKKSLVAAYESDEEPEVQEETVSGEEKQQI-DWDKLACLICKRQFNSKDILKKHTQL 107
EE+ +++ + + P+ +E T E+ ++ DW+KLACL+C+RQF +K++L KH QL
Sbjct: 916 EEEEEQTPPPQPRTTQPPQREELTKKENEEDKLTDWNKLACLLCRRQFPNKEVLIKHQQL 975
Query: 108 SELHKSNLKMWYTCRNLDPNDA-VHRAVQ---YRDRAKERRLKYGEPEVPPACKLKAKYS 163
S+LHK NL++ + + A + R Q +++R +RR K + P + + KYS
Sbjct: 976 SDLHKQNLEIHRKIKQSEQELAYLERREQEGRFKERGNDRREKLQSFDSPE--RKRIKYS 1033
Query: 164 K 164
+
Sbjct: 1034 R 1034
>WB|WBGene00013224 [details] [associations]
symbol:Y55D9A.2 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000253
InterPro:IPR000467 InterPro:IPR008984 Pfam:PF01585 PROSITE:PS50174
SMART:SM00443 GO:GO:0003676 Gene3D:2.60.200.20 SUPFAM:SSF49879
eggNOG:NOG270400 GeneTree:ENSGT00510000046476 EMBL:AL032649
PIR:T27191 RefSeq:NP_502415.1 ProteinModelPortal:Q95Q15 SMR:Q95Q15
IntAct:Q95Q15 STRING:Q95Q15 PaxDb:Q95Q15 PRIDE:Q95Q15
EnsemblMetazoa:Y55D9A.2b GeneID:178216 KEGG:cel:CELE_Y55D9A.2
UCSC:Y55D9A.2a CTD:178216 WormBase:Y55D9A.2b HOGENOM:HOG000020034
InParanoid:Q95Q15 OMA:FKLLKSM NextBio:900202 ArrayExpress:Q95Q15
Uniprot:Q95Q15
Length = 511
Score = 150 (57.9 bits), Expect = 4.3e-08, P = 4.3e-08
Identities = 34/107 (31%), Positives = 54/107 (50%)
Query: 147 YGEPEVPPACKLKAKYSKVKEATVTFEEPTKKGIGADNVGNKLLQKMGWTQGQGLGKTNQ 206
YG P + + K+ + K + + NVG KLL+ MGW++GQGLGK Q
Sbjct: 398 YGSCAAKPMPEGQRKFDLPSTSAAVAAAAAPKPLDSGNVGFKLLKSMGWSEGQGLGKEKQ 457
Query: 207 GRTSIIEAEARISSAGLGTNAIGMTPAPGETYKDCVKKMMRARYSQI 253
G + E + + GLG N P P ++YKD V + + R++++
Sbjct: 458 GHVEPVATEVKNNRKGLGANE--KEP-PTKSYKDQVLEKTKQRFNEV 501
>UNIPROTKB|C9J250 [details] [associations]
symbol:RBM6 "RNA-binding protein 6" species:9606 "Homo
sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000467 Pfam:PF01585 PROSITE:PS50174 SMART:SM00443
GO:GO:0003676 EMBL:AC105935 EMBL:AC104450 HGNC:HGNC:9903
ChiTaRS:RBM6 IPI:IPI00926809 ProteinModelPortal:C9J250
STRING:C9J250 Ensembl:ENST00000421682 ArrayExpress:C9J250
Bgee:C9J250 Uniprot:C9J250
Length = 119
Score = 126 (49.4 bits), Expect = 8.2e-08, P = 8.2e-08
Identities = 27/78 (34%), Positives = 41/78 (52%)
Query: 177 KKGIGADNVGNKLLQKMGWTQGQGLGKTNQGRTSIIEAEARISSAGLGTNAIGMTPAPGE 236
K+ I + G + Q GW +G GLG + G S EAE R+ +G + E
Sbjct: 42 KEDIDTSSKGGCVQQATGWRKGTGLGYGHPGLASSEEAEGRMRGPSVGASGRTSKRQSNE 101
Query: 237 TYKDCVKKMMRARYSQID 254
TY+D V+++M ARY ++D
Sbjct: 102 TYRDAVRRVMFARYKELD 119
>TAIR|locus:2083750 [details] [associations]
symbol:AT3G52120 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0003723
"RNA binding" evidence=IEA;ISS] [GO:0005622 "intracellular"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006396 "RNA
processing" evidence=IEA;ISS] InterPro:IPR000061 InterPro:IPR000467
Pfam:PF01585 Pfam:PF01805 PROSITE:PS50128 PROSITE:PS50174
SMART:SM00443 SMART:SM00648 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0008380 GO:GO:0006397 GO:GO:0003723
EMBL:AL049711 SUPFAM:SSF109905 PIR:T49091 KO:K13096 EMBL:AY037259
EMBL:AY094004 IPI:IPI00529054 RefSeq:NP_566957.1 UniGene:At.53
UniGene:At.63607 ProteinModelPortal:Q94C11 SMR:Q94C11 STRING:Q94C11
PRIDE:Q94C11 EnsemblPlants:AT3G52120.1 GeneID:824376
KEGG:ath:AT3G52120 TAIR:At3g52120 eggNOG:NOG299701
HOGENOM:HOG000064592 InParanoid:Q94C11 OMA:TRQRNPG PhylomeDB:Q94C11
ProtClustDB:CLSN2917419 Genevestigator:Q94C11 GermOnline:AT3G52120
Uniprot:Q94C11
Length = 443
Score = 144 (55.7 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 31/91 (34%), Positives = 49/91 (53%)
Query: 157 KLKAKYSKVKEATVTFEEPTKKGIGADNVGNKLLQKMGWTQGQGLGKTNQGRTS-IIEAE 215
K +K + T E K I ADNVG+KLL KMGW +G+G+G + +G I+ +
Sbjct: 335 KFLSKCNDAAAQKATKEAAEKAKIQADNVGHKLLSKMGWKEGEGIGSSRKGMADPIMAGD 394
Query: 216 ARISSAGLGTNAIGMTPAPGETYKDCVKKMM 246
+ ++ G+G +A G + Y+ K+MM
Sbjct: 395 VKTNNLGVGASAPGEVKPEDDIYEQYKKRMM 425
>UNIPROTKB|E2RLI2 [details] [associations]
symbol:AGGF1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] [GO:0045766 "positive regulation of angiogenesis"
evidence=IEA] [GO:0043499 "eukaryotic cell surface binding"
evidence=IEA] [GO:0007155 "cell adhesion" evidence=IEA] [GO:0005576
"extracellular region" evidence=IEA] [GO:0001938 "positive
regulation of endothelial cell proliferation" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000253
InterPro:IPR000467 InterPro:IPR008984 Pfam:PF00498 Pfam:PF01585
PROSITE:PS50006 PROSITE:PS50174 SMART:SM00240 SMART:SM00443
GO:GO:0048471 GO:GO:0005576 GO:GO:0001938 GO:GO:0043499
GO:GO:0007155 GO:GO:0045766 GO:GO:0003676 Gene3D:2.60.200.20
SUPFAM:SSF49879 CTD:55109 OMA:NKNKKNW GeneTree:ENSGT00510000046476
EMBL:AAEX03002138 RefSeq:XP_536317.2 ProteinModelPortal:E2RLI2
Ensembl:ENSCAFT00000014724 GeneID:479176 KEGG:cfa:479176
Uniprot:E2RLI2
Length = 711
Score = 121 (47.7 bits), Expect = 1.1e-06, Sum P(3) = 1.1e-06
Identities = 42/126 (33%), Positives = 62/126 (49%)
Query: 102 KKHTQLSELHKSNLKMWYTCRNLDPNDA-VHRAVQYRDRAKERRLKYGEPEVPPACKLKA 160
K+ + EL K +K Y +N D D + +Y+DRA +RR + G +
Sbjct: 551 KELERRKELKKIRVK--YGLQNTDYEDEKALKNPKYKDRAGKRREQIGS---------EG 599
Query: 161 KYSKVKE-ATVTFEEPTKKGIGADNVGNKLLQKMGWTQGQGLGKTNQGRTSIIEAEARIS 219
+ + A+V FE I N G K+L+KMGW +G+GLGK G I+ + R +
Sbjct: 600 TFQRDDAPASVHFE------ITDSNKGRKMLEKMGWKKGEGLGKDGGGMKIPIQLQLRRT 653
Query: 220 SAGLGT 225
AGLGT
Sbjct: 654 HAGLGT 659
Score = 57 (25.1 bits), Expect = 1.1e-06, Sum P(3) = 1.1e-06
Identities = 15/57 (26%), Positives = 29/57 (50%)
Query: 12 KEISKVANNTEQA--ASESPSQSTQGSADVCFSVVGNNREEKTKKSLVAAYESDEEP 66
+EI K+ ++TE+ ++ES +Q + + ++ R E +KKS V + P
Sbjct: 41 REIEKLLHHTERLYQSAESSNQELRSQVEELSKILHCGRNEDSKKSDVEVQTENHPP 97
Score = 40 (19.1 bits), Expect = 1.1e-06, Sum P(3) = 1.1e-06
Identities = 6/21 (28%), Positives = 15/21 (71%)
Query: 64 EEPEVQEETVSGEEKQQIDWD 84
++ +++ T++ E++ QID D
Sbjct: 125 QDQDIKASTLNSEDQSQIDND 145
>UNIPROTKB|F1MKY1 [details] [associations]
symbol:AGGF1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
[GO:0045766 "positive regulation of angiogenesis" evidence=IEA]
[GO:0043499 "eukaryotic cell surface binding" evidence=IEA]
[GO:0007155 "cell adhesion" evidence=IEA] [GO:0005576
"extracellular region" evidence=IEA] [GO:0001938 "positive
regulation of endothelial cell proliferation" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000253
InterPro:IPR000467 InterPro:IPR008984 Pfam:PF00498 Pfam:PF01585
PROSITE:PS50006 PROSITE:PS50174 SMART:SM00240 SMART:SM00443
GO:GO:0048471 GO:GO:0005576 GO:GO:0001938 GO:GO:0043499
GO:GO:0007155 GO:GO:0045766 GO:GO:0003676 Gene3D:2.60.200.20
SUPFAM:SSF49879 CTD:55109 OMA:NKNKKNW GeneTree:ENSGT00510000046476
EMBL:DAAA02027763 EMBL:DAAA02027764 IPI:IPI00721733
RefSeq:NP_001069000.2 UniGene:Bt.26680 ProteinModelPortal:F1MKY1
Ensembl:ENSBTAT00000049280 GeneID:511650 KEGG:bta:511650
NextBio:20870033 ArrayExpress:F1MKY1 Uniprot:F1MKY1
Length = 712
Score = 119 (46.9 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 39/125 (31%), Positives = 59/125 (47%)
Query: 102 KKHTQLSELHKSNLKMWYTCRNLDPNDA-VHRAVQYRDRAKERRLKYGEPEVPPACKLKA 160
K+ + EL K +K Y +N D D + +Y+DRA +RR + G +
Sbjct: 552 KELERRKELKKIRVK--YGLQNTDYEDEKTLKNPKYKDRAGKRREQIGS---------EG 600
Query: 161 KYSKVKEATVTFEEPTKKGIGADNVGNKLLQKMGWTQGQGLGKTNQGRTSIIEAEARISS 220
+ + E T N G K+L+KMGW +G+GLGK G + I+ + R +
Sbjct: 601 TFQRDDAPASVHSEITDS-----NKGRKMLEKMGWKKGEGLGKDGGGMKTPIQLQLRRTH 655
Query: 221 AGLGT 225
AGLGT
Sbjct: 656 AGLGT 660
Score = 53 (23.7 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 15/57 (26%), Positives = 28/57 (49%)
Query: 12 KEISKVANNTEQA--ASESPSQSTQGSADVCFSVVGNNREEKTKKSLVAAYESDEEP 66
+EI K+ ++TE+ ++ES +Q + + ++ R E KKS V + P
Sbjct: 44 REIEKLLHHTERLYQSAESNNQELRTQVEELSKILHCGRNEDNKKSDVEVQTENHPP 100
Score = 37 (18.1 bits), Expect = 0.00060, Sum P(2) = 0.00060
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 91 CKRQFNSKDILKKHTQ-LSELHKSN 114
CKRQ + L HT+ L + +SN
Sbjct: 39 CKRQVREIEKLLHHTERLYQSAESN 63
>MGI|MGI:1913799 [details] [associations]
symbol:Aggf1 "angiogenic factor with G patch and FHA domains
1" species:10090 "Mus musculus" [GO:0001525 "angiogenesis"
evidence=IEA] [GO:0001938 "positive regulation of endothelial cell
proliferation" evidence=ISO] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005576 "extracellular region" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0007155 "cell adhesion"
evidence=ISO] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0043499 "eukaryotic cell surface binding" evidence=ISO]
[GO:0045766 "positive regulation of angiogenesis" evidence=ISO]
[GO:0048471 "perinuclear region of cytoplasm" evidence=ISO]
InterPro:IPR000253 InterPro:IPR000467 InterPro:IPR008984
Pfam:PF00498 Pfam:PF01585 PROSITE:PS50006 PROSITE:PS50174
SMART:SM00240 SMART:SM00443 MGI:MGI:1913799 GO:GO:0048471
GO:GO:0005576 GO:GO:0030154 GO:GO:0001938 GO:GO:0043499
GO:GO:0007155 GO:GO:0001525 GO:GO:0045766 GO:GO:0003676
Gene3D:2.60.200.20 SUPFAM:SSF49879 CTD:55109 eggNOG:NOG270400
HOGENOM:HOG000033843 HOVERGEN:HBG050465 OMA:NKNKKNW
OrthoDB:EOG4S1T6Q ChiTaRS:AGGF1 EMBL:AY500995 EMBL:AK008168
EMBL:AK008399 EMBL:AK009533 EMBL:AK017248 EMBL:BC027286
EMBL:BC052410 IPI:IPI00187239 RefSeq:NP_079906.2 UniGene:Mm.36785
ProteinModelPortal:Q7TN31 SMR:Q7TN31 STRING:Q7TN31
PhosphoSite:Q7TN31 PRIDE:Q7TN31 Ensembl:ENSMUST00000022189
GeneID:66549 KEGG:mmu:66549 UCSC:uc007rmi.1
GeneTree:ENSGT00510000046476 InParanoid:Q7TN31 NextBio:321992
Bgee:Q7TN31 CleanEx:MM_AGGF1 Genevestigator:Q7TN31
GermOnline:ENSMUSG00000021681 Uniprot:Q7TN31
Length = 711
Score = 114 (45.2 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 37/112 (33%), Positives = 56/112 (50%)
Query: 132 RAVQYRDRAKERRLKYG----EPEVPPACK---LKAKYSKVKE---ATVTFEE---PTK- 177
+ ++ R K+ R+KYG + E A K K + K +E + TF+ P
Sbjct: 551 KELERRKALKKIRVKYGLQNTDYEAEKALKNPKYKDRAGKRREQVGSEGTFQRDDAPASV 610
Query: 178 -KGIGADNVGNKLLQKMGWTQGQGLGKTNQGRTSIIEAEARISSAGLGTNAI 228
I N G K+L+KMGW +G+GLGK G + I+ + R + AGLGT +
Sbjct: 611 HSEITDSNKGRKMLEKMGWKRGEGLGKDGGGMKTPIQLQLRRTHAGLGTGKL 662
Score = 58 (25.5 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 23/70 (32%), Positives = 31/70 (44%)
Query: 10 HRKEISKVANNTEQAASESPSQSTQG-SADVCFSVVGNNREEKTKKSLVAAYESDEEPEV 68
H + K A T+ + SP Q T S D S G++ +K + ES+ EPE
Sbjct: 312 HSGNVKKKAR-TDTSHKSSPLQLTVAVSGDTVESP-GDDNSASSKDERIG--ESESEPEE 367
Query: 69 QEETVSGEEK 78
E T S EK
Sbjct: 368 GEITDSQSEK 377
>UNIPROTKB|I3L6Q0 [details] [associations]
symbol:I3L6Q0 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000467 Pfam:PF01585 PROSITE:PS50174 SMART:SM00443
GO:GO:0003676 GeneTree:ENSGT00530000063742 EMBL:CU855572
Ensembl:ENSSSCT00000025378 OMA:QEWITIG Uniprot:I3L6Q0
Length = 123
Score = 104 (41.7 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 21/47 (44%), Positives = 30/47 (63%)
Query: 183 DNVGNKLLQKMGWTQGQGLGKTNQGRTSIIEAEARISSAGLGTNAIG 229
++V KL+ KMG+ +G+GLGK +QGR I+EA + GLG G
Sbjct: 3 NSVSQKLMAKMGFKEGEGLGKYSQGRKDIVEASNQKGRRGLGLTLQG 49
>ZFIN|ZDB-GENE-060929-836 [details] [associations]
symbol:aggf1 "angiogenic factor with G patch and
FHA domains 1" species:7955 "Danio rerio" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0001525 "angiogenesis" evidence=IMP]
[GO:0051897 "positive regulation of protein kinase B signaling
cascade" evidence=IMP] [GO:0060841 "venous blood vessel
development" evidence=IMP] [GO:0001570 "vasculogenesis"
evidence=IMP] InterPro:IPR000253 InterPro:IPR000467
InterPro:IPR008984 Pfam:PF00498 Pfam:PF01585 PROSITE:PS50006
PROSITE:PS50174 SMART:SM00240 SMART:SM00443
ZFIN:ZDB-GENE-060929-836 GO:GO:0003676 Gene3D:2.60.200.20
SUPFAM:SSF49879 CTD:55109 eggNOG:NOG270400 HOGENOM:HOG000033843
HOVERGEN:HBG050465 OrthoDB:EOG4S1T6Q EMBL:BC124193 IPI:IPI00801129
RefSeq:NP_001073451.1 UniGene:Dr.75501 ProteinModelPortal:Q08CK9
PRIDE:Q08CK9 GeneID:559905 KEGG:dre:559905 InParanoid:Q08CK9
NextBio:20883193 ArrayExpress:Q08CK9 Bgee:Q08CK9 Uniprot:Q08CK9
Length = 774
Score = 121 (47.7 bits), Expect = 3.3e-05, Sum P(2) = 3.3e-05
Identities = 44/168 (26%), Positives = 79/168 (47%)
Query: 92 KRQFNSKDILKKHTQLSELHKS--NLKMWYTCRNLDPNDAVH-RAVQYRDRAKERRLKYG 148
K+ +S +L K + ++ K +K+ Y ++ D + + +Y+DRA+ RR G
Sbjct: 597 KKDESSGAVLSKEDKEAQRQKELKMMKVKYGLKSSDYEEQKPLKNSKYKDRAENRRQTVG 656
Query: 149 EPEVPPACKLKAKYSKVKE-ATVTFEEPTKKGIGADNVGNKLLQKMGWTQGQGLGKTNQG 207
+ K+ + A+V E IG +N G ++L+KMGW +G+GLGK G
Sbjct: 657 S---------EGKFQRDDAPASVHVE------IGDENKGRQMLEKMGWKRGEGLGKDGAG 701
Query: 208 RTSIIEAEARISSAGLGTNAIGMTPAPGETYKDCVKK---MMRARYSQ 252
I+ R + +GLG++ M+ K ++ R R+S+
Sbjct: 702 IKDPIQLHMRKAQSGLGSSGSAMSVEDASLTKSKTQRNWERARERFSE 749
Score = 48 (22.0 bits), Expect = 3.3e-05, Sum P(2) = 3.3e-05
Identities = 21/67 (31%), Positives = 33/67 (49%)
Query: 48 REE-KTKKSLVAAYESD--EEPEVQEETVSGEE--KQQIDWDKLACLICKRQFNSKDILK 102
REE KT K + + + +Q+ T S E +QQ+D KL+ I +R+ K+ +
Sbjct: 54 REELKTCKDELQKLQKQLSQSERLQKTTESYNEDLRQQVD--KLSAEIHERKKRDKEKVD 111
Query: 103 KHTQLSE 109
TQ E
Sbjct: 112 AETQTEE 118
Score = 43 (20.2 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 21/105 (20%), Positives = 41/105 (39%)
Query: 6 KTLNHRKEISKVANNTEQAASESPSQSTQGSADVCFSVVGNNREEKTKKSLVAAYESDEE 65
K +RK+ + + +++ + ++ S D R + +KS S+ E
Sbjct: 358 KRSTNRKKTRRRSEDSDDSRCSRRKENGSNSEDKR-KKTKKKRALRDRKSGSDEGSSESE 416
Query: 66 PEVQEETVSGEEKQQIDWDKLACLICKRQFNSKDI-LKKHTQLSE 109
PE E T S E + ++ +S D ++ TQ+ E
Sbjct: 417 PEEGEITESDGENHSCSVSSSSVSSIQKTLDSPDEEMEMETQMQE 461
>ZFIN|ZDB-GENE-030131-6966 [details] [associations]
symbol:gpatch8 "G patch domain containing 8"
species:7955 "Danio rerio" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000467
InterPro:IPR007087 InterPro:IPR015880 Pfam:PF01585 PROSITE:PS00028
PROSITE:PS50157 PROSITE:PS50174 SMART:SM00355 SMART:SM00443
ZFIN:ZDB-GENE-030131-6966 GO:GO:0008270 GO:GO:0003676 GO:GO:0005622
InterPro:IPR022755 Pfam:PF12171 CTD:23131
GeneTree:ENSGT00530000063305 EMBL:CR388062 EMBL:BX640549
RefSeq:XP_693776.3 UniGene:Dr.155553 UniGene:Dr.35328
Ensembl:ENSDART00000151193 GeneID:565404 KEGG:dre:565404
Bgee:I3IS56 Uniprot:I3IS56
Length = 1498
Score = 130 (50.8 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 29/79 (36%), Positives = 44/79 (55%)
Query: 162 YSKVKEATVTFEEPT-KKGIGADNVGNKLLQKMGWTQGQGLGKTNQGRTSIIEAEARISS 220
+ + +E + E+ + K I +DN+G++LLQK GW GQGLGKT QGRT + +
Sbjct: 20 FDQYEEGQLELEQASLDKPIESDNIGHRLLQKHGWKLGQGLGKTMQGRTDPVPIVLKYDV 79
Query: 221 AGLGTNAIGMTPAPGETYK 239
G+G + + A T K
Sbjct: 80 MGMGRMEMELDYAEDATEK 98
>UNIPROTKB|Q8N302 [details] [associations]
symbol:AGGF1 "Angiogenic factor with G patch and FHA
domains 1" species:9606 "Homo sapiens" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0001525 "angiogenesis" evidence=IEA]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IDA]
[GO:0043499 "eukaryotic cell surface binding" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005576 "extracellular
region" evidence=IDA] [GO:0045766 "positive regulation of
angiogenesis" evidence=IDA] [GO:0001938 "positive regulation of
endothelial cell proliferation" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0006396 "RNA processing" evidence=TAS]
[GO:0007155 "cell adhesion" evidence=IDA] [GO:0001570
"vasculogenesis" evidence=TAS] InterPro:IPR000253
InterPro:IPR000467 InterPro:IPR008984 Pfam:PF00498 Pfam:PF01585
PROSITE:PS50006 PROSITE:PS50174 SMART:SM00240 SMART:SM00443
GO:GO:0048471 GO:GO:0005576 GO:GO:0001938 GO:GO:0043499
GO:GO:0007155 GO:GO:0001525 GO:GO:0045766 GO:GO:0003676
Gene3D:2.60.200.20 SUPFAM:SSF49879 GO:GO:0006396 GO:GO:0001570
EMBL:AY500994 EMBL:AY500996 EMBL:U84971 EMBL:BC002828 EMBL:BC029382
EMBL:AK001145 IPI:IPI00018027 IPI:IPI00106911 IPI:IPI00164579
RefSeq:NP_060516.2 UniGene:Hs.634849 ProteinModelPortal:Q8N302
SMR:Q8N302 IntAct:Q8N302 MINT:MINT-1475154 STRING:Q8N302
PhosphoSite:Q8N302 DMDM:45477317 PaxDb:Q8N302 PRIDE:Q8N302
DNASU:55109 Ensembl:ENST00000312916 Ensembl:ENST00000506806
GeneID:55109 KEGG:hsa:55109 UCSC:uc003kes.3 UCSC:uc003ket.3
CTD:55109 GeneCards:GC05P076362 HGNC:HGNC:24684 HPA:HPA043500
MIM:149000 MIM:608464 neXtProt:NX_Q8N302 Orphanet:90308
PharmGKB:PA134951291 eggNOG:NOG270400 HOGENOM:HOG000033843
HOVERGEN:HBG050465 InParanoid:Q8N302 OMA:NKNKKNW OrthoDB:EOG4S1T6Q
PhylomeDB:Q8N302 ChiTaRS:AGGF1 GenomeRNAi:55109 NextBio:58725
PMAP-CutDB:Q8N302 ArrayExpress:Q8N302 Bgee:Q8N302 CleanEx:HS_AGGF1
Genevestigator:Q8N302 GermOnline:ENSG00000164252 Uniprot:Q8N302
Length = 714
Score = 115 (45.5 bits), Expect = 4.2e-05, Sum P(2) = 4.2e-05
Identities = 38/125 (30%), Positives = 59/125 (47%)
Query: 102 KKHTQLSELHKSNLKMWYTCRNLDPNDA-VHRAVQYRDRAKERRLKYGEPEVPPACKLKA 160
K+ + EL K +K Y +N + D + +Y+DRA +RR + G +
Sbjct: 554 KELERRKELKKIRVK--YGLQNTEYEDEKTLKNPKYKDRAGKRREQVGS---------EG 602
Query: 161 KYSKVKEATVTFEEPTKKGIGADNVGNKLLQKMGWTQGQGLGKTNQGRTSIIEAEARISS 220
+ + E T N G K+L+KMGW +G+GLGK G + I+ + R +
Sbjct: 603 TFQRDDAPASVHSEITDS-----NKGRKMLEKMGWKKGEGLGKDGGGMKTPIQLQLRRTH 657
Query: 221 AGLGT 225
AGLGT
Sbjct: 658 AGLGT 662
Score = 53 (23.7 bits), Expect = 4.2e-05, Sum P(2) = 4.2e-05
Identities = 15/57 (26%), Positives = 27/57 (47%)
Query: 12 KEISKVANNTEQAA--SESPSQSTQGSADVCFSVVGNNREEKTKKSLVAAYESDEEP 66
+EI K+ ++TE+ +ES +Q + + ++ R E KKS V + P
Sbjct: 44 REIEKLLHHTERLYQNAESNNQELRTQVEELSKILQRGRNEDNKKSDVEVQTENHAP 100
Score = 49 (22.3 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 21/90 (23%), Positives = 36/90 (40%)
Query: 1 MEKWAKT-LNHRKEISKVANNTEQAASESP-SQSTQGSADVCFSVVGNNREEKTKKSLVA 58
M+K AK ++H+ KV T ESP ++ S + E + +
Sbjct: 316 MKKKAKIGIHHKNSPPKVTVPTSGNTIESPLHENISNSTSFKDEKIMETDSEPEEGEITD 375
Query: 59 AYESD--EEPEVQEETVSGEEKQQIDWDKL 86
+ D +E E V+ E+ + D DK+
Sbjct: 376 SQTEDSYDEAITSEGNVTAEDSEDEDEDKI 405
>UNIPROTKB|Q9NW75 [details] [associations]
symbol:GPATCH2 "G patch domain-containing protein 2"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0010923 "negative regulation of phosphatase
activity" evidence=IDA] InterPro:IPR000467 Pfam:PF01585
PROSITE:PS50174 SMART:SM00443 EMBL:CH471100 GO:GO:0003676
GO:GO:0010923 HOGENOM:HOG000294060 InterPro:IPR026291
PANTHER:PTHR14195 EMBL:AK001114 EMBL:AL354659 EMBL:AC096641
EMBL:BC042193 EMBL:BC063474 IPI:IPI00018019 IPI:IPI00414242
RefSeq:NP_060510.1 UniGene:Hs.420757 ProteinModelPortal:Q9NW75
IntAct:Q9NW75 PhosphoSite:Q9NW75 DMDM:48428171 PRIDE:Q9NW75
Ensembl:ENST00000366934 Ensembl:ENST00000366935 GeneID:55105
KEGG:hsa:55105 UCSC:uc001hlf.1 UCSC:uc001hlg.4 CTD:55105
GeneCards:GC01M217600 HGNC:HGNC:25499 HPA:HPA027181 HPA:HPA027322
neXtProt:NX_Q9NW75 PharmGKB:PA162390064 eggNOG:NOG300034
HOVERGEN:HBG062801 InParanoid:Q9NW75 OMA:VPWWEKE OrthoDB:EOG4WM4TR
PhylomeDB:Q9NW75 ChiTaRS:GPATCH2 GenomeRNAi:55105 NextBio:58709
Bgee:Q9NW75 CleanEx:HS_GPATCH2 Genevestigator:Q9NW75
GermOnline:ENSG00000092978 Uniprot:Q9NW75
Length = 528
Score = 111 (44.1 bits), Expect = 4.4e-05, Sum P(2) = 4.4e-05
Identities = 23/56 (41%), Positives = 32/56 (57%)
Query: 169 TVTFEEPTKKGIGADNVGNKLLQKMGWTQGQGLGKTNQGRTSIIEAEARISSAGLG 224
T F + I +N+GN++LQ MGWT G GLG+ +G + I+A R GLG
Sbjct: 454 TAGFVGENAQPILENNIGNRMLQNMGWTPGSGLGRDGKGISEPIQAMQRPKGLGLG 509
Score = 54 (24.1 bits), Expect = 4.4e-05, Sum P(2) = 4.4e-05
Identities = 23/90 (25%), Positives = 41/90 (45%)
Query: 6 KTLNHRKEISKVANNTEQAASE--SPSQSTQGSADVCF-SVVGNNREEKTKKSLVAAYES 62
+TL R+++ ++A + Q S + +Q +G D S +E TK +
Sbjct: 156 RTLRRRRKVKRMAVDLPQDISNKRTMTQPPEGCRDQDMDSDRAYQYQEFTKNKVKKRKLK 215
Query: 63 --DEEPEVQEETV--SGEEKQQIDWDKLAC 88
+ P++Q+E V EE Q + DK+ C
Sbjct: 216 IIRQGPKIQDEGVVLESEETNQTNKDKMEC 245
>UNIPROTKB|F1NFM6 [details] [associations]
symbol:PINX1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000228 "nuclear chromosome" evidence=IEA] [GO:0000776
"kinetochore" evidence=IEA] [GO:0000781 "chromosome, telomeric
region" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0005819 "spindle"
evidence=IEA] [GO:0007004 "telomere maintenance via telomerase"
evidence=IEA] [GO:0007080 "mitotic metaphase plate congression"
evidence=IEA] [GO:0070034 "telomeric RNA binding" evidence=IEA]
InterPro:IPR000467 Pfam:PF01585 PROSITE:PS50174 SMART:SM00443
GO:GO:0005739 GO:GO:0005730 GO:GO:0000776 GO:GO:0005819
GO:GO:0000781 GO:GO:0000228 GO:GO:0007004 GO:GO:0007080
GO:GO:0070034 GeneTree:ENSGT00450000040279 EMBL:AADN02018316
EMBL:AADN02018314 EMBL:AADN02018315 IPI:IPI00598699
Ensembl:ENSGALT00000026871 OMA:QGNTEHI Uniprot:F1NFM6
Length = 99
Score = 101 (40.6 bits), Expect = 5.1e-05, P = 5.1e-05
Identities = 17/41 (41%), Positives = 28/41 (68%)
Query: 186 GNKLLQKMGWTQGQGLGKTNQGRTSIIEAEARISSAGLGTN 226
G ++L+KMGW++G+GLG QG T I+ + + + GLG +
Sbjct: 28 GQRMLEKMGWSKGKGLGAQEQGNTEHIKVQVKNNMLGLGAS 68
>UNIPROTKB|I3L834 [details] [associations]
symbol:GPATCH2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0010923 "negative regulation of phosphatase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000467 Pfam:PF01585 PROSITE:PS50174 SMART:SM00443
GO:GO:0003676 GO:GO:0010923 GeneTree:ENSGT00410000025698
EMBL:CU855830 Ensembl:ENSSSCT00000025633 Uniprot:I3L834
Length = 185
Score = 114 (45.2 bits), Expect = 5.5e-05, P = 5.5e-05
Identities = 23/51 (45%), Positives = 30/51 (58%)
Query: 183 DNVGNKLLQKMGWTQGQGLGKTNQGRTSIIEAEARISSAGLGTNAIGMTPA 233
+N+GN++LQ MGWT G GLG+ +G I+A R GLG TPA
Sbjct: 125 NNIGNRMLQNMGWTPGSGLGRDGKGIAEPIQAMQRPKGLGLGFPLPKTTPA 175
>UNIPROTKB|F1M1F0 [details] [associations]
symbol:LOC688211 "Protein LOC688211" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR000467 InterPro:IPR007087
InterPro:IPR015880 Pfam:PF01585 PROSITE:PS00028 PROSITE:PS50157
PROSITE:PS50174 SMART:SM00355 SMART:SM00443 GO:GO:0008270
GO:GO:0003676 GO:GO:0005622 InterPro:IPR022755 Pfam:PF12171
IPI:IPI00948230 Ensembl:ENSRNOT00000028569 ArrayExpress:F1M1F0
Uniprot:F1M1F0
Length = 635
Score = 124 (48.7 bits), Expect = 6.3e-05, P = 6.3e-05
Identities = 26/64 (40%), Positives = 39/64 (60%)
Query: 162 YSKVKEATVTFEEPT-KKGIGADNVGNKLLQKMGWTQGQGLGKTNQGRTSIIEAEARISS 220
+ + +E + E+ + K I +DN+G++LLQK GW GQGLGK+ QGRT I +
Sbjct: 20 FDQYEEGHLEIEQASLDKPIESDNIGHRLLQKHGWKLGQGLGKSLQGRTDPIPIVVKYDV 79
Query: 221 AGLG 224
G+G
Sbjct: 80 MGMG 83
>ZFIN|ZDB-GENE-030515-2 [details] [associations]
symbol:pinx1 "pin2/trf1-interacting protein 1"
species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0010521 "telomerase inhibitor activity"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR000467 Pfam:PF01585
PROSITE:PS50174 SMART:SM00443 ZFIN:ZDB-GENE-030515-2 GO:GO:0005730
GO:GO:0003676 GO:GO:0010521 HOVERGEN:HBG061365
GeneTree:ENSGT00450000040279 EMBL:BX510941 IPI:IPI00507082
UniGene:Dr.75635 Ensembl:ENSDART00000128435 InParanoid:Q5RHK8
Uniprot:Q5RHK8
Length = 355
Score = 120 (47.3 bits), Expect = 7.4e-05, P = 7.4e-05
Identities = 21/40 (52%), Positives = 31/40 (77%)
Query: 186 GNKLLQKMGWTQGQGLGKTNQGRTSIIEAEARISSAGLGT 225
G K+L++MGW++G+GLGKT QG T I+ + + +S GLGT
Sbjct: 30 GQKMLERMGWSKGKGLGKTEQGSTEHIKVKVKNNSLGLGT 69
>UNIPROTKB|E5RJG9 [details] [associations]
symbol:PINX1 "PIN2/TERF1-interacting telomerase inhibitor
1" species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000467 Pfam:PF01585 PROSITE:PS50174
SMART:SM00443 GO:GO:0003676 HGNC:HGNC:30046 EMBL:AC105001
EMBL:AC011008 IPI:IPI01009127 Ensembl:ENST00000523559
ArrayExpress:E5RJG9 Bgee:E5RJG9 Uniprot:E5RJG9
Length = 134
Score = 99 (39.9 bits), Expect = 8.5e-05, P = 8.5e-05
Identities = 17/39 (43%), Positives = 27/39 (69%)
Query: 186 GNKLLQKMGWTQGQGLGKTNQGRTSIIEAEARISSAGLG 224
G ++L+KMGW++G+GLG QG T I+ + + + GLG
Sbjct: 30 GQRMLEKMGWSKGKGLGAQEQGATDHIKVQVKNNHLGLG 68
>UNIPROTKB|Q5R951 [details] [associations]
symbol:DKFZp459G1317 "Putative uncharacterized protein
DKFZp459G1317" species:9601 "Pongo abelii" [GO:0001938 "positive
regulation of endothelial cell proliferation" evidence=ISS]
[GO:0005576 "extracellular region" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0007155 "cell adhesion" evidence=ISS]
[GO:0043499 "eukaryotic cell surface binding" evidence=ISS]
[GO:0045766 "positive regulation of angiogenesis" evidence=ISS]
[GO:0048471 "perinuclear region of cytoplasm" evidence=ISS]
InterPro:IPR000253 InterPro:IPR000467 InterPro:IPR008984
Pfam:PF00498 Pfam:PF01585 PROSITE:PS50006 PROSITE:PS50174
SMART:SM00240 SMART:SM00443 GO:GO:0048471 GO:GO:0005576
GO:GO:0001938 GO:GO:0043499 GO:GO:0007155 GO:GO:0045766
GO:GO:0003676 Gene3D:2.60.200.20 SUPFAM:SSF49879
HOGENOM:HOG000033843 HOVERGEN:HBG050465 EMBL:CR859544
UniGene:Pab.11802 ProteinModelPortal:Q5R951 InParanoid:Q5R951
Uniprot:Q5R951
Length = 609
Score = 115 (45.5 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 38/125 (30%), Positives = 59/125 (47%)
Query: 102 KKHTQLSELHKSNLKMWYTCRNLDPNDA-VHRAVQYRDRAKERRLKYGEPEVPPACKLKA 160
K+ + EL K +K Y +N + D + +Y+DRA +RR + G +
Sbjct: 449 KELERRKELKKIRVK--YGLQNTEYEDEKTLKNPKYKDRAGKRREQVGS---------EG 497
Query: 161 KYSKVKEATVTFEEPTKKGIGADNVGNKLLQKMGWTQGQGLGKTNQGRTSIIEAEARISS 220
+ + E T N G K+L+KMGW +G+GLGK G + I+ + R +
Sbjct: 498 TFQRDDAPASVHSEITDS-----NKGRKMLEKMGWKKGEGLGKDGGGMKTPIQLQLRRTH 552
Query: 221 AGLGT 225
AGLGT
Sbjct: 553 AGLGT 557
Score = 47 (21.6 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 21/90 (23%), Positives = 36/90 (40%)
Query: 1 MEKWAKT-LNHRKEISKVANNTEQAASESP-SQSTQGSADVCFSVVGNNREEKTKKSLVA 58
M+K AK ++H+ KV T ESP ++ S + E + +
Sbjct: 211 MKKKAKIGIHHKNSPPKVTVPTSGNTIESPLHENISKSTSFRDEKIMETDSEPEEGEITD 270
Query: 59 AYESD--EEPEVQEETVSGEEKQQIDWDKL 86
+ D +E E V+ E+ + D DK+
Sbjct: 271 SQTEDSYDEDITSEGNVTAEDSEDEDEDKI 300
>UNIPROTKB|K7EKU0 [details] [associations]
symbol:GPATCH8 "G patch domain-containing protein 8"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR000467
InterPro:IPR007087 InterPro:IPR015880 Pfam:PF01585 PROSITE:PS00028
PROSITE:PS50157 PROSITE:PS50174 SMART:SM00355 SMART:SM00443
InterPro:IPR022755 Pfam:PF12171 EMBL:AC103703 EMBL:AC007722
HGNC:HGNC:29066 Ensembl:ENST00000585614 Uniprot:K7EKU0
Length = 221
Score = 114 (45.2 bits), Expect = 0.00012, P = 0.00012
Identities = 22/42 (52%), Positives = 28/42 (66%)
Query: 183 DNVGNKLLQKMGWTQGQGLGKTNQGRTSIIEAEARISSAGLG 224
DN+G++LLQK GW GQGLGK+ QGRT I + G+G
Sbjct: 16 DNIGHRLLQKHGWKLGQGLGKSLQGRTDPIPIVVKYDVMGMG 57
>UNIPROTKB|F1S2H1 [details] [associations]
symbol:AGGF1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
[GO:0045766 "positive regulation of angiogenesis" evidence=IEA]
[GO:0043499 "eukaryotic cell surface binding" evidence=IEA]
[GO:0007155 "cell adhesion" evidence=IEA] [GO:0005576
"extracellular region" evidence=IEA] [GO:0001938 "positive
regulation of endothelial cell proliferation" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000253
InterPro:IPR000467 InterPro:IPR008984 Pfam:PF00498 Pfam:PF01585
PROSITE:PS50006 PROSITE:PS50174 SMART:SM00240 SMART:SM00443
GO:GO:0048471 GO:GO:0005576 GO:GO:0001938 GO:GO:0043499
GO:GO:0007155 GO:GO:0045766 GO:GO:0003676 Gene3D:2.60.200.20
SUPFAM:SSF49879 CTD:55109 OMA:NKNKKNW GeneTree:ENSGT00510000046476
EMBL:CU467996 EMBL:CU928290 RefSeq:XP_003123763.1
Ensembl:ENSSSCT00000015395 GeneID:100520064 KEGG:ssc:100520064
Uniprot:F1S2H1
Length = 714
Score = 124 (48.7 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 42/126 (33%), Positives = 63/126 (50%)
Query: 102 KKHTQLSELHKSNLKMWYTCRNLDPNDA-VHRAVQYRDRAKERRLKYGEPEVPPACKLKA 160
K+ + EL K +K Y +N D D + +Y+DRA +RR + G +
Sbjct: 554 KELERRKELKKIRVK--YGLQNTDYEDEKALKNPKYKDRAGKRREQVGS---------EG 602
Query: 161 KYSKVKE-ATVTFEEPTKKGIGADNVGNKLLQKMGWTQGQGLGKTNQGRTSIIEAEARIS 219
+ + A+V FE I N G K+L+KMGW +G+GLGK G + I+ + R +
Sbjct: 603 TFQRDDAPASVHFE------ITDSNKGRKMLEKMGWKKGEGLGKDGGGMKTPIQLQLRRT 656
Query: 220 SAGLGT 225
AGLGT
Sbjct: 657 HAGLGT 662
Score = 37 (18.1 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 91 CKRQFNSKDILKKHTQ-LSELHKSN 114
CKRQ + L HT+ L + +SN
Sbjct: 39 CKRQVREIEKLLHHTERLYQSAESN 63
>UNIPROTKB|F1MAK0 [details] [associations]
symbol:F1MAK0 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000253 InterPro:IPR000467
InterPro:IPR008984 Pfam:PF00498 Pfam:PF01585 PROSITE:PS50006
PROSITE:PS50174 SMART:SM00240 SMART:SM00443 GO:GO:0048471
GO:GO:0005576 GO:GO:0001938 GO:GO:0043499 GO:GO:0007155
GO:GO:0045766 GO:GO:0003676 Gene3D:2.60.200.20 SUPFAM:SSF49879
GeneTree:ENSGT00510000046476 IPI:IPI00763234
Ensembl:ENSRNOT00000051653 Uniprot:F1MAK0
Length = 706
Score = 116 (45.9 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 38/128 (29%), Positives = 60/128 (46%)
Query: 101 LKKHTQLSELHKS--NLKMWYTCRNLDPNDA-VHRAVQYRDRAKERRLKYGEPEVPPACK 157
L K + E K+ +++ Y +N D D + +Y+DRA +RR + G
Sbjct: 541 LSKEEKELERRKALKKIRVKYGLQNTDYEDEKALKNPKYKDRAGKRREQVGS-------- 592
Query: 158 LKAKYSKVKEATVTFEEPTKKGIGADNVGNKLLQKMGWTQGQGLGKTNQGRTSIIEAEAR 217
+ + + E T N G K+L+KMGW +G+GLGK G + I+ + R
Sbjct: 593 -EGTFQRDDAPASVHSEITDS-----NKGRKMLEKMGWKKGEGLGKDGGGMKTPIQLQLR 646
Query: 218 ISSAGLGT 225
+ AGLGT
Sbjct: 647 RTHAGLGT 654
Score = 46 (21.3 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 9/33 (27%), Positives = 21/33 (63%)
Query: 5 AKTLNHRKEISKVANNTEQAASESPSQSTQGSA 37
A+++NHR E +++ E A++ + + +GS+
Sbjct: 150 AESVNHRHEDHFTSDSQESASALAEGSALEGSS 182
>UNIPROTKB|Q4R8E5 [details] [associations]
symbol:Q4R8E5 "Testis cDNA clone: QtsA-12647, similar to
human angiogenic factor VG5Q (VG5Q)," species:9541 "Macaca
fascicularis" [GO:0001938 "positive regulation of endothelial cell
proliferation" evidence=ISS] [GO:0005576 "extracellular region"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0007155
"cell adhesion" evidence=ISS] [GO:0043499 "eukaryotic cell surface
binding" evidence=ISS] [GO:0045766 "positive regulation of
angiogenesis" evidence=ISS] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] InterPro:IPR000253 InterPro:IPR000467
InterPro:IPR008984 Pfam:PF00498 Pfam:PF01585 PROSITE:PS50006
PROSITE:PS50174 SMART:SM00240 SMART:SM00443 GO:GO:0048471
GO:GO:0005576 GO:GO:0001938 GO:GO:0043499 GO:GO:0007155
GO:GO:0045766 GO:GO:0003676 Gene3D:2.60.200.20 SUPFAM:SSF49879
HOVERGEN:HBG050465 EMBL:AB168508 ProteinModelPortal:Q4R8E5
Uniprot:Q4R8E5
Length = 399
Score = 109 (43.4 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 37/125 (29%), Positives = 58/125 (46%)
Query: 102 KKHTQLSELHKSNLKMWYTCRNLDPNDA-VHRAVQYRDRAKERRLKYGEPEVPPACKLKA 160
K+ + EL K +K Y +N + D + +Y+DRA +RR + G +
Sbjct: 239 KELERRKELKKIRVK--YGLQNTEYEDEKTLKNPKYKDRAGKRREQIGS---------EG 287
Query: 161 KYSKVKEATVTFEEPTKKGIGADNVGNKLLQKMGWTQGQGLGKTNQGRTSIIEAEARISS 220
+ + E T N G K+L+K GW +G+GLGK G + I+ + R +
Sbjct: 288 TFQRDDAPASVHSEITDS-----NKGRKMLEKTGWKKGEGLGKDGGGMKTPIQLQLRRTH 342
Query: 221 AGLGT 225
AGLGT
Sbjct: 343 AGLGT 347
Score = 47 (21.6 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 23/92 (25%), Positives = 37/92 (40%)
Query: 1 MEKWAKT-LNHRKEISK----VANNT-EQAASESPSQSTQGSADVCFSVVGNNREEKTKK 54
M+K AK ++H+ + K + NT E E S ST + E +
Sbjct: 1 MKKKAKIGIHHKNSLPKFTVPASGNTIESPLHEDISNSTSFKDEKIMETDSEPEEGEITD 60
Query: 55 SLVAAYESDEEPEVQEETVSGEEKQQIDWDKL 86
S +S +E E V+ E+ + D DK+
Sbjct: 61 SQTE--DSYDEDITSEGNVTAEDSEDEDEDKI 90
>RGD|1596463 [details] [associations]
symbol:Gpatch8 "G patch domain containing 8" species:10116
"Rattus norvegicus" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR000467
InterPro:IPR007087 InterPro:IPR015880 Pfam:PF01585 PROSITE:PS00028
PROSITE:PS50157 PROSITE:PS50174 SMART:SM00355 SMART:SM00443
RGD:1596463 GO:GO:0008270 GO:GO:0003676 GO:GO:0005622
InterPro:IPR022755 Pfam:PF12171 GeneTree:ENSGT00530000063305
IPI:IPI00388794 Ensembl:ENSRNOT00000050474 ArrayExpress:F1M4M5
Uniprot:F1M4M5
Length = 1494
Score = 124 (48.7 bits), Expect = 0.00018, P = 0.00018
Identities = 26/64 (40%), Positives = 39/64 (60%)
Query: 162 YSKVKEATVTFEEPT-KKGIGADNVGNKLLQKMGWTQGQGLGKTNQGRTSIIEAEARISS 220
+ + +E + E+ + K I +DN+G++LLQK GW GQGLGK+ QGRT I +
Sbjct: 6 FDQYEEGHLEIEQASLDKPIESDNIGHRLLQKHGWKLGQGLGKSLQGRTDPIPIVVKYDV 65
Query: 221 AGLG 224
G+G
Sbjct: 66 MGMG 69
>UNIPROTKB|E2RIL0 [details] [associations]
symbol:GPATCH8 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000467
InterPro:IPR007087 InterPro:IPR015880 Pfam:PF01585 PROSITE:PS00028
PROSITE:PS50157 PROSITE:PS50174 SMART:SM00355 SMART:SM00443
GO:GO:0008270 GO:GO:0003676 GO:GO:0005622 InterPro:IPR022755
Pfam:PF12171 GeneTree:ENSGT00530000063305 EMBL:AAEX03006418
EMBL:AAEX03006419 EMBL:AAEX03006420 Ensembl:ENSCAFT00000022434
NextBio:20855511 Uniprot:E2RIL0
Length = 1502
Score = 124 (48.7 bits), Expect = 0.00018, P = 0.00018
Identities = 26/64 (40%), Positives = 39/64 (60%)
Query: 162 YSKVKEATVTFEEPT-KKGIGADNVGNKLLQKMGWTQGQGLGKTNQGRTSIIEAEARISS 220
+ + +E + E+ + K I +DN+G++LLQK GW GQGLGK+ QGRT I +
Sbjct: 19 FDQYEEGHLEIEQASLDKPIESDNIGHRLLQKHGWKLGQGLGKSLQGRTDPIPIVVKYDV 78
Query: 221 AGLG 224
G+G
Sbjct: 79 MGMG 82
>UNIPROTKB|J9P741 [details] [associations]
symbol:GPATCH8 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000467
InterPro:IPR007087 InterPro:IPR015880 Pfam:PF01585 PROSITE:PS00028
PROSITE:PS50157 PROSITE:PS50174 SMART:SM00355 SMART:SM00443
GO:GO:0008270 GO:GO:0003676 GO:GO:0005622 InterPro:IPR022755
Pfam:PF12171 CTD:23131 OMA:NKQEPGG GeneTree:ENSGT00530000063305
EMBL:AAEX03006418 EMBL:AAEX03006419 EMBL:AAEX03006420
RefSeq:XP_537619.2 Ensembl:ENSCAFT00000049407 GeneID:480500
KEGG:cfa:480500 Uniprot:J9P741
Length = 1502
Score = 124 (48.7 bits), Expect = 0.00018, P = 0.00018
Identities = 26/64 (40%), Positives = 39/64 (60%)
Query: 162 YSKVKEATVTFEEPT-KKGIGADNVGNKLLQKMGWTQGQGLGKTNQGRTSIIEAEARISS 220
+ + +E + E+ + K I +DN+G++LLQK GW GQGLGK+ QGRT I +
Sbjct: 19 FDQYEEGHLEIEQASLDKPIESDNIGHRLLQKHGWKLGQGLGKSLQGRTDPIPIVVKYDV 78
Query: 221 AGLG 224
G+G
Sbjct: 79 MGMG 82
>UNIPROTKB|Q9UKJ3 [details] [associations]
symbol:GPATCH8 "G patch domain-containing protein 8"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR000467 InterPro:IPR007087
InterPro:IPR015880 Pfam:PF01585 PROSITE:PS00028 PROSITE:PS50157
PROSITE:PS50174 SMART:SM00355 SMART:SM00443 GO:GO:0046872
GO:GO:0008270 GO:GO:0003676 GO:GO:0005622 EMBL:CH471178
InterPro:IPR022755 Pfam:PF12171 EMBL:AB011125 EMBL:AC103703
EMBL:AC007722 EMBL:BC024147 EMBL:BC136629 EMBL:AK025600
EMBL:AF160252 IPI:IPI00457284 IPI:IPI00941748 IPI:IPI00942874
PIR:T00329 RefSeq:NP_001002909.1 UniGene:Hs.463129
ProteinModelPortal:Q9UKJ3 IntAct:Q9UKJ3 MINT:MINT-2870438
STRING:Q9UKJ3 DMDM:254763309 PaxDb:Q9UKJ3 PRIDE:Q9UKJ3
Ensembl:ENST00000335500 Ensembl:ENST00000434000 GeneID:23131
KEGG:hsa:23131 UCSC:uc002igv.2 CTD:23131 GeneCards:GC17M042472
H-InvDB:HIX0202385 HGNC:HGNC:29066 HPA:HPA044380 MIM:614396
neXtProt:NX_Q9UKJ3 PharmGKB:PA162390105 eggNOG:NOG84587
HOGENOM:HOG000231046 InParanoid:Q9UKJ3 OMA:NKQEPGG
OrthoDB:EOG4S7JP6 ChiTaRS:GPATCH8 GenomeRNAi:23131 NextBio:44379
ArrayExpress:Q9UKJ3 Bgee:Q9UKJ3 CleanEx:HS_GPATCH8
Genevestigator:Q9UKJ3 GermOnline:ENSG00000186566 Uniprot:Q9UKJ3
Length = 1502
Score = 124 (48.7 bits), Expect = 0.00018, P = 0.00018
Identities = 26/64 (40%), Positives = 39/64 (60%)
Query: 162 YSKVKEATVTFEEPT-KKGIGADNVGNKLLQKMGWTQGQGLGKTNQGRTSIIEAEARISS 220
+ + +E + E+ + K I +DN+G++LLQK GW GQGLGK+ QGRT I +
Sbjct: 19 FDQYEEGHLEIEQASLDKPIESDNIGHRLLQKHGWKLGQGLGKSLQGRTDPIPIVVKYDV 78
Query: 221 AGLG 224
G+G
Sbjct: 79 MGMG 82
>MGI|MGI:1918667 [details] [associations]
symbol:Gpatch8 "G patch domain containing 8" species:10090
"Mus musculus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005622
"intracellular" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR000467
InterPro:IPR007087 InterPro:IPR015880 Pfam:PF01585 PROSITE:PS00028
PROSITE:PS50157 PROSITE:PS50174 SMART:SM00355 SMART:SM00443
MGI:MGI:1918667 GO:GO:0046872 GO:GO:0008270 GO:GO:0003676
GO:GO:0005622 InterPro:IPR022755 Pfam:PF12171 EMBL:AL596258
CTD:23131 eggNOG:NOG84587 HOGENOM:HOG000231046 OMA:NKQEPGG
OrthoDB:EOG4S7JP6 ChiTaRS:GPATCH8 EMBL:AK122307 IPI:IPI00341196
RefSeq:NP_001152964.1 UniGene:Mm.260282 PhosphoSite:A2A6A1
PaxDb:A2A6A1 PRIDE:A2A6A1 Ensembl:ENSMUST00000143842 GeneID:237943
KEGG:mmu:237943 UCSC:uc007lsb.2 GeneTree:ENSGT00530000063305
InParanoid:A2A6A1 NextBio:383594 Bgee:A2A6A1 Genevestigator:A2A6A1
Uniprot:A2A6A1
Length = 1505
Score = 124 (48.7 bits), Expect = 0.00018, P = 0.00018
Identities = 26/64 (40%), Positives = 39/64 (60%)
Query: 162 YSKVKEATVTFEEPT-KKGIGADNVGNKLLQKMGWTQGQGLGKTNQGRTSIIEAEARISS 220
+ + +E + E+ + K I +DN+G++LLQK GW GQGLGK+ QGRT I +
Sbjct: 19 FDQYEEGHLEIEQASLDKPIESDNIGHRLLQKHGWKLGQGLGKSLQGRTDPIPIVVKYDV 78
Query: 221 AGLG 224
G+G
Sbjct: 79 MGMG 82
>UNIPROTKB|E1BC37 [details] [associations]
symbol:GPATCH8 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000467 InterPro:IPR007087
InterPro:IPR015880 Pfam:PF01585 PROSITE:PS00028 PROSITE:PS50157
PROSITE:PS50174 SMART:SM00355 SMART:SM00443 GO:GO:0008270
GO:GO:0003676 GO:GO:0005622 InterPro:IPR022755 Pfam:PF12171
OMA:NKQEPGG GeneTree:ENSGT00530000063305 EMBL:DAAA02049249
IPI:IPI00923866 Ensembl:ENSBTAT00000061184 Uniprot:E1BC37
Length = 1509
Score = 124 (48.7 bits), Expect = 0.00018, P = 0.00018
Identities = 26/64 (40%), Positives = 39/64 (60%)
Query: 162 YSKVKEATVTFEEPT-KKGIGADNVGNKLLQKMGWTQGQGLGKTNQGRTSIIEAEARISS 220
+ + +E + E+ + K I +DN+G++LLQK GW GQGLGK+ QGRT I +
Sbjct: 19 FDQYEEGHLEIEQASLDKPIESDNIGHRLLQKHGWKLGQGLGKSLQGRTDPIPIVVKYDV 78
Query: 221 AGLG 224
G+G
Sbjct: 79 MGMG 82
>TAIR|locus:2124306 [details] [associations]
symbol:AT4G34140 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0005622
"intracellular" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
InterPro:IPR000467 Pfam:PF01585 PROSITE:PS50174 SMART:SM00443
EMBL:CP002687 GO:GO:0003676 IPI:IPI00539127 RefSeq:NP_195140.5
UniGene:At.31524 ProteinModelPortal:F4JKK9
EnsemblPlants:AT4G34140.1 GeneID:829562 KEGG:ath:AT4G34140
Uniprot:F4JKK9
Length = 530
Score = 119 (46.9 bits), Expect = 0.00018, P = 0.00018
Identities = 46/188 (24%), Positives = 81/188 (43%)
Query: 48 REEKTKKSLVAAYESDEEPEVQEETVSGEEKQQIDWD-KLACLICKRQFNSKDILKKHTQ 106
++ K K++ + E ++E+T +K + D KL C+ + K+ +
Sbjct: 339 KKGKPKRASKLTVKPSEVDMIEEKTKRKAKKVKPKADCKLTVKPCEVDMFEEQETKREAK 398
Query: 107 LSELHKSNLKMWYTCRNLDPNDAVH--RAVQYRDRAKERRLKYGEPEVPPACKLKAKYSK 164
+ K++ K+ T + D + + R+ YRDRA ERR +G V P K
Sbjct: 399 KVK-PKTDCKL--TVKPRDEVNMIEEQRSCSYRDRAAERRNLHGGYGVGPGQKGTTVDHN 455
Query: 165 VKEATV--------TFEEPTKKGIGADNVGNKLLQKMGWTQGQGLGKTNQGRTSIIEAEA 216
E +V T E + G+ + +++ MGW +G+ LGK +G I+A
Sbjct: 456 TDEHSVPDTGSEEDTVAEALELSFGSGSYARRIMGNMGWKEGETLGKNTKGLVEPIQAVG 515
Query: 217 RISSAGLG 224
+ GLG
Sbjct: 516 NTGNVGLG 523
>UNIPROTKB|O15226 [details] [associations]
symbol:NKRF "NF-kappa-B-repressing factor" species:9606
"Homo sapiens" [GO:0003725 "double-stranded RNA binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR000467 InterPro:IPR001159 InterPro:IPR001374
Pfam:PF01424 Pfam:PF01585 PROSITE:PS50174 PROSITE:PS51061
SMART:SM00358 SMART:SM00393 SMART:SM00443 InterPro:IPR014720
GO:GO:0005634 GO:GO:0045892 GO:GO:0005730 GO:GO:0003677
Gene3D:3.30.160.20 GO:GO:0006351 GO:GO:0003725 EMBL:AJ011812
EMBL:AY208891 EMBL:BC040379 EMBL:BC047878 EMBL:Y07707
IPI:IPI00005675 RefSeq:NP_001166958.1 RefSeq:NP_001166959.1
RefSeq:NP_060014.2 UniGene:Hs.437084 ProteinModelPortal:O15226
SMR:O15226 DIP:DIP-34570N IntAct:O15226 STRING:O15226
PhosphoSite:O15226 SWISS-2DPAGE:O15226 PaxDb:O15226
PeptideAtlas:O15226 PRIDE:O15226 Ensembl:ENST00000304449
Ensembl:ENST00000371527 GeneID:55922 KEGG:hsa:55922 UCSC:uc004erq.3
CTD:55922 GeneCards:GC0XM118722 HGNC:HGNC:19374 HPA:HPA001476
MIM:300440 neXtProt:NX_O15226 PharmGKB:PA134990602 eggNOG:NOG123689
HOGENOM:HOG000230930 HOVERGEN:HBG052630 InParanoid:O15226
OrthoDB:EOG4M65H5 PhylomeDB:O15226 ChEMBL:CHEMBL3163
GenomeRNAi:55922 NextBio:61327 ArrayExpress:O15226 Bgee:O15226
CleanEx:HS_NKRF Genevestigator:O15226 GermOnline:ENSG00000186416
Uniprot:O15226
Length = 690
Score = 118 (46.6 bits), Expect = 0.00035, P = 0.00035
Identities = 34/99 (34%), Positives = 50/99 (50%)
Query: 130 VHRAVQYRDRAKE-RRLKYGEPEVPPACKLKAKYSKVKEATV---TFEEPTKKGIGADNV 185
V + V+Y + + LK +P V K A + + + EE K+ I DN+
Sbjct: 495 VKKTVKYEAAGEAVKTLKKTQPTVINNLKKGAVEDVISRNEIQGRSAEEAYKQQIKEDNI 554
Query: 186 GNKLLQKMGWTQGQGLGKTNQGRTSIIEAEARISSAGLG 224
GN+LL+KMGWT G GLGK+ +G I + + GLG
Sbjct: 555 GNQLLRKMGWTGG-GLGKSGEGIREPISVKEQHKREGLG 592
>UNIPROTKB|K7GNC7 [details] [associations]
symbol:NKRF "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0003725 "double-stranded RNA binding" evidence=IEA]
InterPro:IPR000467 InterPro:IPR001159 InterPro:IPR001374
Pfam:PF01424 Pfam:PF01585 PROSITE:PS50174 PROSITE:PS51061
SMART:SM00358 SMART:SM00393 SMART:SM00443 InterPro:IPR014720
Gene3D:3.30.160.20 GeneTree:ENSGT00530000063234 EMBL:CU467108
EMBL:CU915797 EMBL:GACC01000158 RefSeq:XP_001927218.3
Ensembl:ENSSSCT00000036344 GeneID:100155370 Uniprot:K7GNC7
Length = 690
Score = 118 (46.6 bits), Expect = 0.00035, P = 0.00035
Identities = 34/99 (34%), Positives = 50/99 (50%)
Query: 130 VHRAVQYRDRAKE-RRLKYGEPEVPPACKLKAKYSKVKEATV---TFEEPTKKGIGADNV 185
V + V+Y + + LK +P V K A + + + EE K+ I DN+
Sbjct: 495 VKKTVKYEAAGEAVKTLKKTQPTVINNLKKGAVEDVISRNEIQGRSAEEAYKQQIKEDNI 554
Query: 186 GNKLLQKMGWTQGQGLGKTNQGRTSIIEAEARISSAGLG 224
GN+LL+KMGWT G GLGK+ +G I + + GLG
Sbjct: 555 GNQLLRKMGWTGG-GLGKSGEGIREPISVKEQHKREGLG 592
>UNIPROTKB|G3V1N1 [details] [associations]
symbol:NKRF "NF-kappa-B-repressing factor" species:9606
"Homo sapiens" [GO:0003725 "double-stranded RNA binding"
evidence=IEA] InterPro:IPR000467 InterPro:IPR001159
InterPro:IPR001374 Pfam:PF01424 Pfam:PF01585 PROSITE:PS50174
PROSITE:PS51061 SMART:SM00358 SMART:SM00393 SMART:SM00443
InterPro:IPR014720 Gene3D:3.30.160.20 GO:GO:0005622 GO:GO:0003725
EMBL:CH471161 RefSeq:NP_001166958.1 UniGene:Hs.437084 GeneID:55922
KEGG:hsa:55922 CTD:55922 HGNC:HGNC:19374 GenomeRNAi:55922
NextBio:61327 EMBL:AC004913 ProteinModelPortal:G3V1N1 SMR:G3V1N1
Ensembl:ENST00000542113 OMA:SIQACKT ArrayExpress:G3V1N1 Bgee:G3V1N1
Uniprot:G3V1N1
Length = 705
Score = 118 (46.6 bits), Expect = 0.00035, P = 0.00035
Identities = 34/99 (34%), Positives = 50/99 (50%)
Query: 130 VHRAVQYRDRAKE-RRLKYGEPEVPPACKLKAKYSKVKEATV---TFEEPTKKGIGADNV 185
V + V+Y + + LK +P V K A + + + EE K+ I DN+
Sbjct: 510 VKKTVKYEAAGEAVKTLKKTQPTVINNLKKGAVEDVISRNEIQGRSAEEAYKQQIKEDNI 569
Query: 186 GNKLLQKMGWTQGQGLGKTNQGRTSIIEAEARISSAGLG 224
GN+LL+KMGWT G GLGK+ +G I + + GLG
Sbjct: 570 GNQLLRKMGWTGG-GLGKSGEGIREPISVKEQHKREGLG 607
>ZFIN|ZDB-GENE-081031-96 [details] [associations]
symbol:si:ch73-21k16.4 "si:ch73-21k16.4"
species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000467 Pfam:PF01585 PROSITE:PS50174
SMART:SM00443 ZFIN:ZDB-GENE-081031-96 GO:GO:0003676
GeneTree:ENSGT00410000025698 InterPro:IPR026291 PANTHER:PTHR14195
CTD:55105 OrthoDB:EOG4WM4TR EMBL:BX004824 EMBL:CU571074
IPI:IPI01006997 RefSeq:XP_003200809.1 Ensembl:ENSDART00000136646
GeneID:555214 KEGG:dre:555214 Uniprot:F6NLS1
Length = 490
Score = 116 (45.9 bits), Expect = 0.00036, P = 0.00036
Identities = 23/43 (53%), Positives = 27/43 (62%)
Query: 184 NVGNKLLQKMGWTQGQGLGKTNQGRTSIIEAEARISSAGLGTN 226
N+GN++LQ MGWT G GLG +G T I A R AGLG N
Sbjct: 448 NLGNRMLQSMGWTPGTGLGPEGRGITEPIRASQRPKGAGLGFN 490
>ASPGD|ASPL0000028823 [details] [associations]
symbol:AN5578 species:162425 "Emericella nidulans"
[GO:0005634 "nucleus" evidence=IEA] [GO:0044732 "mitotic spindle
pole body" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR000467
InterPro:IPR022783 Pfam:PF01585 Pfam:PF07842 PROSITE:PS50174
SMART:SM00443 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
EMBL:BN001305 EMBL:AACD01000096 KO:K13103 OrthoDB:EOG4K0TXN
eggNOG:NOG312699 RefSeq:XP_663182.1 EnsemblFungi:CADANIAT00003501
GeneID:2871870 KEGG:ani:AN5578.2 HOGENOM:HOG000191443 OMA:IARPSAF
Uniprot:Q5B1K2
Length = 778
Score = 118 (46.6 bits), Expect = 0.00040, P = 0.00040
Identities = 23/52 (44%), Positives = 35/52 (67%)
Query: 173 EEPTKKGIGADNVGNKLLQKMGWTQGQGLGKTNQGRTSIIEAEARISSAGLG 224
++ + G+ A++ G ++L KMG+ QGQGLG + QG + IEA+AR GLG
Sbjct: 73 KQSSGNGLAANSFGARMLAKMGYVQGQGLGSSGQGIVNPIEAQARPQGIGLG 124
>UNIPROTKB|F1RUA0 [details] [associations]
symbol:NKRF "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IEA]
InterPro:IPR000467 InterPro:IPR001159 InterPro:IPR001374
Pfam:PF01424 Pfam:PF01585 PROSITE:PS50174 PROSITE:PS51061
SMART:SM00358 SMART:SM00393 SMART:SM00443 InterPro:IPR014720
GO:GO:0005737 GO:GO:0045892 GO:GO:0005730 Gene3D:3.30.160.20
GO:GO:0003725 GeneTree:ENSGT00530000063234 InterPro:IPR021859
Pfam:PF11952 OMA:SIQACKT EMBL:CU467108 EMBL:CU915797
Ensembl:ENSSSCT00000013799 Uniprot:F1RUA0
Length = 784
Score = 118 (46.6 bits), Expect = 0.00041, P = 0.00041
Identities = 34/99 (34%), Positives = 50/99 (50%)
Query: 130 VHRAVQYRDRAKE-RRLKYGEPEVPPACKLKAKYSKVKEATV---TFEEPTKKGIGADNV 185
V + V+Y + + LK +P V K A + + + EE K+ I DN+
Sbjct: 589 VKKTVKYEAAGEAVKTLKKTQPTVINNLKKGAVEDVISRNEIQGRSAEEAYKQQIKEDNI 648
Query: 186 GNKLLQKMGWTQGQGLGKTNQGRTSIIEAEARISSAGLG 224
GN+LL+KMGWT G GLGK+ +G I + + GLG
Sbjct: 649 GNQLLRKMGWTGG-GLGKSGEGIREPISVKEQHKREGLG 686
>UNIPROTKB|F1PLE1 [details] [associations]
symbol:GPATCH2 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000467 Pfam:PF01585 PROSITE:PS50174
SMART:SM00443 GO:GO:0003676 GeneTree:ENSGT00410000025698
InterPro:IPR026291 PANTHER:PTHR14195 CTD:55105 OMA:VPWWEKE
EMBL:AAEX03018330 EMBL:AAEX03018331 EMBL:AAEX03018332
EMBL:AAEX03018333 RefSeq:XP_545711.2 Ensembl:ENSCAFT00000017151
GeneID:488594 KEGG:cfa:488594 Uniprot:F1PLE1
Length = 528
Score = 115 (45.5 bits), Expect = 0.00041, Sum P(2) = 0.00041
Identities = 29/78 (37%), Positives = 40/78 (51%)
Query: 157 KLKAKYSKVKEATVT-FEEPTKKGIGADNVGNKLLQKMGWTQGQGLGKTNQGRTSIIEAE 215
K + K + + T T F + I +N+GN++LQ MGWT G GLG+ +G I+A
Sbjct: 441 KRRRKAAPLPGPTTTGFVGENAQPILENNIGNRMLQNMGWTPGSGLGRGGKGIAEPIQAL 500
Query: 216 ARISSAGLGTNAIGMTPA 233
R GLG TPA
Sbjct: 501 QRPKGLGLGFPLPKSTPA 518
Score = 40 (19.1 bits), Expect = 0.00041, Sum P(2) = 0.00041
Identities = 18/92 (19%), Positives = 40/92 (43%)
Query: 6 KTLNHRKEISKVANNTEQ--AASESPSQSTQGSAD--------VCFSVVGNNREEKTKKS 55
+TL R+++ ++A + Q + +Q +G D + N+ +K K
Sbjct: 156 RTLRRRRKVKRMAVDLPQDICNKRTMTQPLEGCRDQDMDNDRAYQYQEFTKNKVKKRKLK 215
Query: 56 LVAAYES--DEEPEVQEETVSGEEKQQIDWDK 85
++ DE ++ E VS K ++D+++
Sbjct: 216 IIRQGPKIQDEGVVLESEEVSQTSKDKMDYEE 247
>POMBASE|SPBC30B4.02c [details] [associations]
symbol:SPBC30B4.02c "R3H and G-patch domain, implicated
in splicing (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0030490 "maturation of SSU-rRNA" evidence=ISO] [GO:0030688
"preribosome, small subunit precursor" evidence=ISO] [GO:0045292
"mRNA cis splicing, via spliceosome" evidence=ISO]
InterPro:IPR000467 InterPro:IPR001374 Pfam:PF01424 Pfam:PF01585
PROSITE:PS50174 PROSITE:PS51061 SMART:SM00393 SMART:SM00443
PomBase:SPBC30B4.02c GO:GO:0005829 EMBL:CU329671 GO:GO:0003676
GO:GO:0030490 GO:GO:0045292 GO:GO:0030688 eggNOG:NOG114135
PIR:T40168 RefSeq:NP_595527.1 ProteinModelPortal:O74363
EnsemblFungi:SPBC30B4.02c.1 GeneID:2540416 KEGG:spo:SPBC30B4.02c
OrthoDB:EOG45F0Z8 NextBio:20801543 Uniprot:O74363
Length = 695
Score = 115 (45.5 bits), Expect = 0.00041, Sum P(2) = 0.00041
Identities = 34/127 (26%), Positives = 66/127 (51%)
Query: 102 KKHTQLSELHK---SNLKMWYTCRNLDPNDAVHRAVQYRDRAKERRLKYGEPEVPPACKL 158
K++T LS+ HK S++ + R ++ + V+Y+ +K R + + +
Sbjct: 578 KRYTMLSKTHKFDASSVDLVSLTRIME---RLQTRVEYQSFSKSGR----KSRMTVSSVR 630
Query: 159 KAKYSKVKEATVTFEEPTKKGIGADNVGNKLLQKMGWTQGQGLGKT-NQGRTSIIEAEAR 217
+K ++V + + E+ + I +N G +LL+K+GW G+GLG N+G + A +
Sbjct: 631 SSKATRVYDGQIVGEDAPE--ISKENPGRRLLEKLGWYAGKGLGHPENEGSKDSLRAIVK 688
Query: 218 ISSAGLG 224
+S +GLG
Sbjct: 689 VSRSGLG 695
Score = 43 (20.2 bits), Expect = 0.00041, Sum P(2) = 0.00041
Identities = 6/24 (25%), Positives = 17/24 (70%)
Query: 57 VAAYESDEEPEVQEETVSGEEKQQ 80
++ E D++ E ++E + GE++++
Sbjct: 260 LSVLEEDDDDEDEDEELEGEKEEE 283
>UNIPROTKB|G3MYW2 [details] [associations]
symbol:NKRF "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IEA]
InterPro:IPR000467 InterPro:IPR001159 InterPro:IPR001374
Pfam:PF01424 Pfam:PF01585 PROSITE:PS50174 PROSITE:PS51061
SMART:SM00358 SMART:SM00393 SMART:SM00443 InterPro:IPR014720
GO:GO:0005737 GO:GO:0045892 GO:GO:0005730 Gene3D:3.30.160.20
GO:GO:0003725 GeneTree:ENSGT00530000063234 OMA:SIQACKT
EMBL:DAAA02067142 EMBL:DAAA02067143 UniGene:Bt.2958
Ensembl:ENSBTAT00000065879 Uniprot:G3MYW2
Length = 690
Score = 117 (46.2 bits), Expect = 0.00045, P = 0.00045
Identities = 34/99 (34%), Positives = 50/99 (50%)
Query: 130 VHRAVQYRDRAKE-RRLKYGEPEVPPACKLKAKYSKVKEATV---TFEEPTKKGIGADNV 185
V + V+Y + + LK +P V K A + + + EE K+ I DN+
Sbjct: 495 VKKTVKYEAAGEAVKTLKKTQPTVINNLKKGAIEDVISRNEIQGRSAEEAYKQQIKEDNI 554
Query: 186 GNKLLQKMGWTQGQGLGKTNQGRTSIIEAEARISSAGLG 224
GN+LL+KMGWT G GLGK+ +G I + + GLG
Sbjct: 555 GNQLLRKMGWTGG-GLGKSGEGIREPISVKEQHKREGLG 592
>UNIPROTKB|E2RI67 [details] [associations]
symbol:NKRF "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003725 "double-stranded RNA binding"
evidence=IEA] InterPro:IPR000467 InterPro:IPR001159
InterPro:IPR001374 Pfam:PF01424 Pfam:PF01585 PROSITE:PS50174
PROSITE:PS51061 SMART:SM00358 SMART:SM00393 SMART:SM00443
InterPro:IPR014720 GO:GO:0005737 GO:GO:0045892 GO:GO:0005730
Gene3D:3.30.160.20 GO:GO:0003725 GeneTree:ENSGT00530000063234
InterPro:IPR021859 Pfam:PF11952 OMA:SIQACKT EMBL:AAEX03026829
Ensembl:ENSCAFT00000029243 Uniprot:E2RI67
Length = 784
Score = 117 (46.2 bits), Expect = 0.00053, P = 0.00052
Identities = 34/99 (34%), Positives = 50/99 (50%)
Query: 130 VHRAVQYRDRAKE-RRLKYGEPEVPPACKLKAKYSKVKEATV---TFEEPTKKGIGADNV 185
V + V+Y + + LK +P V K A + + + EE K+ I DN+
Sbjct: 589 VKKTVKYEAAGEAVKTLKKTQPTVINNLKKGAIEDVISRNEIQGRSAEEAYKQQIKEDNI 648
Query: 186 GNKLLQKMGWTQGQGLGKTNQGRTSIIEAEARISSAGLG 224
GN+LL+KMGWT G GLGK+ +G I + + GLG
Sbjct: 649 GNQLLRKMGWTGG-GLGKSGEGIREPISVKEQHKREGLG 686
>ZFIN|ZDB-GENE-040426-696 [details] [associations]
symbol:ftsjd2 "FtsJ methyltransferase domain
containing 2" species:7955 "Danio rerio" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0008168 "methyltransferase activity"
evidence=IEA] [GO:0032259 "methylation" evidence=IEA] [GO:0004483
"mRNA (nucleoside-2'-O-)-methyltransferase activity"
evidence=IEA;ISS] [GO:0006370 "7-methylguanosine mRNA capping"
evidence=IEA;ISS] [GO:0080009 "mRNA methylation" evidence=ISS]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0016740 "transferase activity" evidence=IEA]
InterPro:IPR000467 InterPro:IPR001202 InterPro:IPR002877
Pfam:PF00397 Pfam:PF01585 Pfam:PF01728 PROSITE:PS01159
PROSITE:PS50020 PROSITE:PS50174 SMART:SM00443 SMART:SM00456
ZFIN:ZDB-GENE-040426-696 GO:GO:0005634 GO:GO:0003676 GO:GO:0006370
eggNOG:COG0293 GO:GO:0004483 InterPro:IPR025816 CTD:23070 KO:K14589
HOVERGEN:HBG057271 OrthoDB:EOG45X7VF EMBL:BC044371 IPI:IPI00509574
RefSeq:NP_956427.1 UniGene:Dr.78030 ProteinModelPortal:Q803R5
PRIDE:Q803R5 GeneID:393102 KEGG:dre:393102 InParanoid:Q803R5
NextBio:20814175 ArrayExpress:Q803R5 Uniprot:Q803R5
Length = 829
Score = 116 (45.9 bits), Expect = 0.00073, P = 0.00073
Identities = 36/126 (28%), Positives = 59/126 (46%)
Query: 101 LKKHTQLSELHKSNLKMWYTCR--NLDPNDAVHRAVQYRDRAKERRLKYGEPEVPPACKL 158
+K+ Q S+ LK T R + D ++ + +D ++ L E P +
Sbjct: 1 MKRAAQASD---EPLKKRKTAREESSDEDEESSQRTTSQDSSQSESLSDVEDHKPSFSR- 56
Query: 159 KAKYSKVKEATVTFEEPTKKGIGADNVGNKLLQKMGWTQGQGLGKTNQGRTSIIEAEARI 218
S+ + ++ E + K +NV KL+ KMG+ +G+GLGK QGR I+EA +
Sbjct: 57 -PSDSQNSQGSMAHNEASNKFAMYNNVSQKLMAKMGFREGEGLGKYGQGRKEIVEASTQR 115
Query: 219 SSAGLG 224
GLG
Sbjct: 116 GRRGLG 121
>MGI|MGI:1924536 [details] [associations]
symbol:Nkrf "NF-kappaB repressing factor" species:10090 "Mus
musculus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003725
"double-stranded RNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISO] InterPro:IPR000467
InterPro:IPR001159 InterPro:IPR001374 Pfam:PF01424 Pfam:PF01585
PROSITE:PS50174 PROSITE:PS51061 SMART:SM00358 SMART:SM00393
SMART:SM00443 InterPro:IPR014720 MGI:MGI:1924536 GO:GO:0005737
GO:GO:0045892 GO:GO:0005730 GO:GO:0003677 Gene3D:3.30.160.20
GO:GO:0006351 GO:GO:0003725 GeneTree:ENSGT00530000063234
EMBL:AL450399 CTD:55922 eggNOG:NOG123689 HOGENOM:HOG000230930
HOVERGEN:HBG052630 OrthoDB:EOG4M65H5 EMBL:AK020455 EMBL:AK042690
EMBL:AK079123 EMBL:BC138828 EMBL:BC138829 IPI:IPI00400329
RefSeq:NP_084167.2 UniGene:Mm.21649 ProteinModelPortal:Q8BY02
SMR:Q8BY02 STRING:Q8BY02 PhosphoSite:Q8BY02 PRIDE:Q8BY02
Ensembl:ENSMUST00000057093 GeneID:77286 KEGG:mmu:77286
InParanoid:A2A3V7 ChiTaRS:NKRF NextBio:346701 Bgee:Q8BY02
CleanEx:MM_NKRF Genevestigator:Q8BY02 GermOnline:ENSMUSG00000044149
Uniprot:Q8BY02
Length = 690
Score = 115 (45.5 bits), Expect = 0.00075, P = 0.00075
Identities = 25/52 (48%), Positives = 33/52 (63%)
Query: 173 EEPTKKGIGADNVGNKLLQKMGWTQGQGLGKTNQGRTSIIEAEARISSAGLG 224
EE K+ I DN+GN+LL+KMGWT G GLGK+ +G I + + GLG
Sbjct: 542 EEAYKQQIKEDNIGNQLLRKMGWTGG-GLGKSGEGIREPISVKEQHKREGLG 592
>RGD|1563950 [details] [associations]
symbol:Nkrf "NFKB repressing factor" species:10116 "Rattus
norvegicus" [GO:0003725 "double-stranded RNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA;ISO]
InterPro:IPR000467 InterPro:IPR001159 InterPro:IPR001374
Pfam:PF01424 Pfam:PF01585 PROSITE:PS50174 PROSITE:PS51061
SMART:SM00358 SMART:SM00393 SMART:SM00443 InterPro:IPR014720
RGD:1563950 GO:GO:0005737 GO:GO:0045892 GO:GO:0005730
Gene3D:3.30.160.20 GO:GO:0003725 GeneTree:ENSGT00530000063234
OrthoDB:EOG4M65H5 IPI:IPI00358660 PRIDE:D3ZSG0
Ensembl:ENSRNOT00000016660 UCSC:RGD:1563950 Uniprot:D3ZSG0
Length = 690
Score = 115 (45.5 bits), Expect = 0.00075, P = 0.00075
Identities = 25/52 (48%), Positives = 33/52 (63%)
Query: 173 EEPTKKGIGADNVGNKLLQKMGWTQGQGLGKTNQGRTSIIEAEARISSAGLG 224
EE K+ I DN+GN+LL+KMGWT G GLGK+ +G I + + GLG
Sbjct: 542 EEAYKQQIKEDNIGNQLLRKMGWTGG-GLGKSGEGIREPISVKEQHKREGLG 592
>UNIPROTKB|F1NPB2 [details] [associations]
symbol:GPATCH8 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR000467 InterPro:IPR007087
InterPro:IPR015880 Pfam:PF01585 PROSITE:PS00028 PROSITE:PS50157
PROSITE:PS50174 SMART:SM00355 SMART:SM00443 GO:GO:0008270
GO:GO:0003676 GO:GO:0005622 InterPro:IPR022755 Pfam:PF12171
GeneTree:ENSGT00530000063305 EMBL:AADN02046912 EMBL:AADN02046913
IPI:IPI00823284 Ensembl:ENSGALT00000040725 Uniprot:F1NPB2
Length = 618
Score = 114 (45.2 bits), Expect = 0.00084, P = 0.00084
Identities = 22/42 (52%), Positives = 28/42 (66%)
Query: 183 DNVGNKLLQKMGWTQGQGLGKTNQGRTSIIEAEARISSAGLG 224
DN+G++LLQK GW GQGLGK+ QGRT I + G+G
Sbjct: 1 DNIGHRLLQKHGWKLGQGLGKSLQGRTDPIPIVVKYDVMGMG 42
>FB|FBgn0051550 [details] [associations]
symbol:CG31550 species:7227 "Drosophila melanogaster"
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000467
Pfam:PF01585 PROSITE:PS50174 SMART:SM00443 EMBL:AE014297
GO:GO:0003676 GeneTree:ENSGT00410000025695 UniGene:Dm.3932
GeneID:40661 KEGG:dme:Dmel_CG31550 FlyBase:FBgn0051550
GenomeRNAi:40661 NextBio:819899 RefSeq:NP_730937.1
ProteinModelPortal:Q9VNC4 SMR:Q9VNC4 IntAct:Q9VNC4 MINT:MINT-283146
STRING:Q9VNC4 EnsemblMetazoa:FBtr0078684 UCSC:CG31550-RB
InParanoid:Q9VNC4 OMA:IECRNEL PhylomeDB:Q9VNC4 ArrayExpress:Q9VNC4
Bgee:Q9VNC4 Uniprot:Q9VNC4
Length = 832
Score = 108 (43.1 bits), Expect = 0.00097, Sum P(2) = 0.00097
Identities = 24/69 (34%), Positives = 37/69 (53%)
Query: 183 DNVGNKLLQKMGWTQGQGLGKTNQGRTSII-EAEARISSAGLGTNAIGMTPAPGETYKDC 241
DN+G ++LQK+GW +GQGLG+ G + +A R + GLG ++ P + D
Sbjct: 750 DNIGFQMLQKLGWKEGQGLGQDGAGIVDPVNKAPQRDGNQGLGVSSAAQ-PEDCDNEYDA 808
Query: 242 VKKMMRARY 250
+K M Y
Sbjct: 809 YRKRMMLAY 817
Score = 49 (22.3 bits), Expect = 0.00097, Sum P(2) = 0.00097
Identities = 21/77 (27%), Positives = 34/77 (44%)
Query: 10 HRKEISKVANNT-EQAASESPSQSTQGSADVCFSVVGNNREEKTKKSLVAAYE-SDEEPE 67
HR+E + +N+ ++ ES + S D + + + K+ + E SDEE
Sbjct: 490 HREE--QHSNSAADKYDPESAISADFDSDDEYMRGMMDRNRDNIKRRIECRNELSDEERR 547
Query: 68 VQEETVSGEEKQQIDWD 84
+EE SGE D D
Sbjct: 548 EREEAASGEPPDGDDQD 564
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.310 0.125 0.359 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 254 254 0.00084 114 3 11 23 0.41 34
32 0.47 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 79
No. of states in DFA: 608 (65 KB)
Total size of DFA: 203 KB (2114 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 29.03u 0.12s 29.15t Elapsed: 00:00:02
Total cpu time: 29.04u 0.12s 29.16t Elapsed: 00:00:02
Start: Thu Aug 15 11:01:24 2013 End: Thu Aug 15 11:01:26 2013