Query psy2452
Match_columns 91
No_of_seqs 82 out of 84
Neff 3.6
Searched_HMMs 13730
Date Fri Aug 16 16:41:58 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy2452.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/2452hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2d4ca1 a.238.1.1 (A:11-247) E 99.1 7.4E-12 5.4E-16 85.9 1.9 86 1-90 107-205 (237)
2 d1y2oa1 a.238.1.3 (A:1-248) BA 97.3 3.1E-05 2.3E-09 53.9 1.8 43 1-47 79-126 (248)
3 d2elba1 a.238.1.1 (A:6-273) DC 97.0 0.00022 1.6E-08 49.6 3.5 79 1-83 84-183 (268)
4 d1i4da_ a.238.1.2 (A:) Arfapti 96.5 0.00089 6.5E-08 43.3 3.1 80 2-86 68-171 (200)
5 d1urua_ a.238.1.1 (A:) Amphiph 95.5 0.0019 1.4E-07 42.2 1.1 81 4-86 73-174 (217)
6 d2efla1 a.238.1.4 (A:1-288) Fo 18.0 52 0.0038 20.7 3.2 25 4-28 79-103 (288)
7 d1n4wa1 c.3.1.2 (A:9-318,A:451 16.8 42 0.003 22.1 2.6 17 72-88 350-366 (367)
8 d1ryp2_ d.153.1.4 (2:) Proteas 15.3 52 0.0038 21.1 2.8 20 69-88 170-189 (233)
9 d3coxa1 c.3.1.2 (A:5-318,A:451 14.6 34 0.0025 22.7 1.7 18 71-88 353-370 (370)
10 d1ryph_ d.153.1.4 (H:) Proteas 12.2 73 0.0053 20.1 2.8 21 68-88 156-176 (205)
No 1
>d2d4ca1 a.238.1.1 (A:11-247) Endophilin-1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.11 E-value=7.4e-12 Score=85.87 Aligned_cols=86 Identities=41% Similarity=0.592 Sum_probs=74.4
Q ss_pred CcHHHHHHHHHHHHHhhhhhhhcccCCCCCcchhhhhhhh---------hcccCccc-ccc-hhcc--cCChHHHHHHHH
Q psy2452 1 MGESLKQMADVKYSLDDNTKQNFLEPRGPKSTLLTTAPLR---------LGKLYWRW-ESH-SSRW--RTSNDELKAAEE 67 (91)
Q Consensus 1 ~Gea~~~~a~ik~~ld~~vk~nfLepL~~~~s~l~~kdlk---------rKKLe~RR-dyD-kKr~--~~kdeElr~A~e 67 (91)
+|+++..|+.....++..+...|++||. .+...|++ ||+++..| +|| .+.+ +..+++++.|+.
T Consensus 107 ~~~~~~~i~~~~~~~~~~i~~~v~~pl~----~~l~~d~~~~~~~~~~~rk~~d~~~~~~~~~~~k~~~~~~e~l~~a~~ 182 (237)
T d2d4ca1 107 VGEAMRELSEVKDSLDIEVKQNFIDPLQ----NLHDKDLREIQSALQHHLKKLEGRRLDFDYKKKRQGKIPDEELRQALE 182 (237)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTHHHHH----HHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHH
Confidence 4788999999999999999999999999 67776765 89999999 999 3333 333999999999
Q ss_pred HHHHHHHHHHHHHhHHhhhcccc
Q psy2452 68 KFAESLHLAQMGMFNLLENDVSI 90 (91)
Q Consensus 68 KfeES~e~a~~~M~nlle~dveq 90 (91)
+|+++.+.+...|++|+++.++.
T Consensus 183 ~~e~~~~~~~~~l~~l~~~~~~~ 205 (237)
T d2d4ca1 183 KFDESKEIAESSMFNLLEMDIEQ 205 (237)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHccHHH
Confidence 99999999999999999987653
No 2
>d1y2oa1 a.238.1.3 (A:1-248) BAP2/IRSp53 N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.34 E-value=3.1e-05 Score=53.87 Aligned_cols=43 Identities=16% Similarity=0.083 Sum_probs=37.6
Q ss_pred CcHHHHHHHHHHHHHhhhhhhhcccCCCCCcchhhhhhhh-----hcccCcc
Q psy2452 1 MGESLKQMADVKYSLDDNTKQNFLEPRGPKSTLLTTAPLR-----LGKLYWR 47 (91)
Q Consensus 1 ~Gea~~~~a~ik~~ld~~vk~nfLepL~~~~s~l~~kdlk-----rKKLe~R 47 (91)
+|++++.|+...+.+...+..+||.||. .....|++ +|++...
T Consensus 79 ~~~~~~~i~~~~~~l~~~~~~~~i~PL~----~~~~~d~k~i~~~kK~~~k~ 126 (248)
T d1y2oa1 79 MAEVHRQIQNQLEEMLKSFHNELLTQLE----QKVELDSRYLSAALKKYQTE 126 (248)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTHHHHH----HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHH
Confidence 4788899999999999999999999999 89998988 7777543
No 3
>d2elba1 a.238.1.1 (A:6-273) DCC-interacting protein 13-alpha, APPL1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.02 E-value=0.00022 Score=49.60 Aligned_cols=79 Identities=6% Similarity=0.107 Sum_probs=60.5
Q ss_pred CcHHHHHHHHHHHHHhhhhhhhcccCCCCCcchhhhhhhh-----hcccCccc-ccc-h--h---cccCC---------h
Q psy2452 1 MGESLKQMADVKYSLDDNTKQNFLEPRGPKSTLLTTAPLR-----LGKLYWRW-ESH-S--S---RWRTS---------N 59 (91)
Q Consensus 1 ~Gea~~~~a~ik~~ld~~vk~nfLepL~~~~s~l~~kdlk-----rKKLe~RR-dyD-k--K---r~~~k---------d 59 (91)
+|++++.|+.....+..++...+++||. .+...|++ ||+.+..+ +|| . | ..+.+ +
T Consensus 84 f~~~~~el~~~~~~l~~~~~~~~~~pL~----~f~~~di~~~ke~kk~fek~~~~yd~~l~k~~~~~k~k~~~~~~~Ea~ 159 (268)
T d2elba1 84 FSKVIDELSSCHAVLSTQLADAMMFPIT----QFKERDLKEILTLKEVFQIASNDHDAAINRYSRLSKKRENDKVKYEVT 159 (268)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTHHHHH----HHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCC-----HHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCcchhhhhHH
Confidence 3788899999999999999999999999 88888888 99999999 999 2 1 11222 4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhHH
Q psy2452 60 DELKAAEEKFAESLHLAQMGMFNL 83 (91)
Q Consensus 60 eElr~A~eKfeES~e~a~~~M~nl 83 (91)
.+|..++..|+.+.-.....|.++
T Consensus 160 ~~l~~~r~~f~~~~~d~~~~l~~l 183 (268)
T d2elba1 160 EDVYTSRKKQHQTMMHYFCALNTL 183 (268)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 557777788887766655555444
No 4
>d1i4da_ a.238.1.2 (A:) Arfaptin, Rac-binding fragment {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.47 E-value=0.00089 Score=43.32 Aligned_cols=80 Identities=14% Similarity=0.052 Sum_probs=54.9
Q ss_pred cHHHHHHHHHHHHHhhhhhhhcccCCCCCcchhhhhhhh-----hcccCccc-ccc-h--h---cc-c---CC-------
Q psy2452 2 GESLKQMADVKYSLDDNTKQNFLEPRGPKSTLLTTAPLR-----LGKLYWRW-ESH-S--S---RW-R---TS------- 58 (91)
Q Consensus 2 Gea~~~~a~ik~~ld~~vk~nfLepL~~~~s~l~~kdlk-----rKKLe~RR-dyD-k--K---r~-~---~k------- 58 (91)
|+++..+......+...+... +.|+. .....+++ +||.+.+| +|| . + .+ + .+
T Consensus 68 ~~~~~~~~~~~~~~~~~~~~~-~~~l~----~~~~~~~~~~~~~~kk~~~~~~dyd~~~~k~~~~~~~~~~~~~~~kl~~ 142 (200)
T d1i4da_ 68 AETQKLLCKNGETLLGAVNFF-VSSIN----TLVTKTMEDTLMTVKQYEAARLEYDAYRTDLEELSLGPRDAGTRGRLES 142 (200)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH-HHHHH----HHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC------------CH
T ss_pred HHHHHHHHHHHHHHHHHHHHH-HhhHH----HHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhhcccccchhhhHHH
Confidence 566777777777776666554 45555 34445555 89999999 999 2 1 11 1 11
Q ss_pred -hHHHHHHHHHHHHHHHHHHHHHhHHhhh
Q psy2452 59 -NDELKAAEEKFAESLHLAQMGMFNLLEN 86 (91)
Q Consensus 59 -deElr~A~eKfeES~e~a~~~M~nlle~ 86 (91)
+.++..|+.+|+....+....|.+|..+
T Consensus 143 ae~~~~~a~~~fe~~~~~~~~~l~~l~~~ 171 (200)
T d1i4da_ 143 AQATFQAHRDKYEKLRGDVAIKLKFLEEN 171 (200)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 6888888999999988888888877654
No 5
>d1urua_ a.238.1.1 (A:) Amphiphysin {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=95.45 E-value=0.0019 Score=42.20 Aligned_cols=81 Identities=9% Similarity=0.037 Sum_probs=58.4
Q ss_pred HHHHHHHHHHHHhhhhhhhcccCCCCCcchhhhhhhh--hcccCccc-ccc-h--h-----cccC--C--------hHHH
Q psy2452 4 SLKQMADVKYSLDDNTKQNFLEPRGPKSTLLTTAPLR--LGKLYWRW-ESH-S--S-----RWRT--S--------NDEL 62 (91)
Q Consensus 4 a~~~~a~ik~~ld~~vk~nfLepL~~~~s~l~~kdlk--rKKLe~RR-dyD-k--K-----r~~~--k--------deEl 62 (91)
....+..+...+...+..++++||..- .-+..+++ .+|.+.++ +|| . + .+.. + +.++
T Consensus 73 ~~~~~~~~~~~~~~~~~~~v~~pL~~~--~~~~~~~~~~~kkr~~~~~dyd~~~~~l~k~~~k~~~~~~~~~l~~~e~~~ 150 (217)
T d1urua_ 73 QTGASESLWADFAHKLGDQVLIPLNTY--TGQFPEMKKKVEKRNRKLIDYDGQRHSFQNLQANANKRKDDVKLTKGREQL 150 (217)
T ss_dssp HHHHHHHHHHHHHHHHHTTTHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCBTTBCCTTTTCHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchhhhHHHHHHH
Confidence 345566667778888899999999942 22334445 88889999 999 1 1 1111 1 7899
Q ss_pred HHHHHHHHHHHHHHHHHHhHHhhh
Q psy2452 63 KAAEEKFAESLHLAQMGMFNLLEN 86 (91)
Q Consensus 63 r~A~eKfeES~e~a~~~M~nlle~ 86 (91)
..|+..|+........-|..|.+.
T Consensus 151 ~~a~~~fe~~~~~l~~el~~~~~~ 174 (217)
T d1urua_ 151 EEARRTYEILNTELHDELPALYDS 174 (217)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999888888777654
No 6
>d2efla1 a.238.1.4 (A:1-288) Formin-binding protein 1, FNBP1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=18.02 E-value=52 Score=20.72 Aligned_cols=25 Identities=8% Similarity=0.157 Sum_probs=19.8
Q ss_pred HHHHHHHHHHHHhhhhhhhcccCCC
Q psy2452 4 SLKQMADVKYSLDDNTKQNFLEPRG 28 (91)
Q Consensus 4 a~~~~a~ik~~ld~~vk~nfLepL~ 28 (91)
....+|.....+........++||.
T Consensus 79 ~~~~~a~~h~~~a~~l~~~i~~~l~ 103 (288)
T d2efla1 79 EMNDYAGQHEVISENMASQIIVDLA 103 (288)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3456777888888888888889988
No 7
>d1n4wa1 c.3.1.2 (A:9-318,A:451-507) Cholesterol oxidase of GMC family {Streptomyces sp. [TaxId: 1931]}
Probab=16.79 E-value=42 Score=22.12 Aligned_cols=17 Identities=24% Similarity=0.325 Sum_probs=13.3
Q ss_pred HHHHHHHHHhHHhhhcc
Q psy2452 72 SLHLAQMGMFNLLENDV 88 (91)
Q Consensus 72 S~e~a~~~M~nlle~dv 88 (91)
.-.+|++.|.|||..|+
T Consensus 350 ~~ala~~~~~~~~~~~~ 366 (367)
T d1n4wa1 350 ITALAERNVERIIKQDV 366 (367)
T ss_dssp HHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHhhc
Confidence 33688889999988876
No 8
>d1ryp2_ d.153.1.4 (2:) Proteasome beta subunit (catalytic) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=15.31 E-value=52 Score=21.08 Aligned_cols=20 Identities=15% Similarity=-0.051 Sum_probs=18.1
Q ss_pred HHHHHHHHHHHHhHHhhhcc
Q psy2452 69 FAESLHLAQMGMFNLLENDV 88 (91)
Q Consensus 69 feES~e~a~~~M~nlle~dv 88 (91)
.+|+.++|..+|....++|+
T Consensus 170 ~eeA~~l~~~al~~~~~rD~ 189 (233)
T d1ryp2_ 170 VQVAEEAIVNAMRVLYYRDA 189 (233)
T ss_dssp HHHHHHHHHHHHHHHHHHBT
T ss_pred HHHHHHHHHHHHHHHHHhcc
Confidence 68899999999999999885
No 9
>d3coxa1 c.3.1.2 (A:5-318,A:451-506) Cholesterol oxidase of GMC family {Brevibacterium sterolicum [TaxId: 1702]}
Probab=14.61 E-value=34 Score=22.66 Aligned_cols=18 Identities=22% Similarity=0.333 Sum_probs=13.4
Q ss_pred HHHHHHHHHHhHHhhhcc
Q psy2452 71 ESLHLAQMGMFNLLENDV 88 (91)
Q Consensus 71 ES~e~a~~~M~nlle~dv 88 (91)
---.+|++.|.+||-.||
T Consensus 353 t~~a~a~~~~~~~~~~~~ 370 (370)
T d3coxa1 353 TITALAERNMDKIISSDI 370 (370)
T ss_dssp HHHHHHHHHHHHHHHHTC
T ss_pred hHHHHHHHHHHHHHhhcC
Confidence 334568889999888875
No 10
>d1ryph_ d.153.1.4 (H:) Proteasome beta subunit (catalytic) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=12.24 E-value=73 Score=20.07 Aligned_cols=21 Identities=10% Similarity=0.116 Sum_probs=18.2
Q ss_pred HHHHHHHHHHHHHhHHhhhcc
Q psy2452 68 KFAESLHLAQMGMFNLLENDV 88 (91)
Q Consensus 68 KfeES~e~a~~~M~nlle~dv 88 (91)
-.+|+.++|..++....+.|+
T Consensus 156 s~~ea~~l~~~al~~a~~rD~ 176 (205)
T d1ryph_ 156 SKEETVDFIKHSLSQAIKWDG 176 (205)
T ss_dssp CHHHHHHHHHHHHHHHHHHBT
T ss_pred CHHHHHHHHHHHHHHHHHhcC
Confidence 358999999999999998885
Done!