RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy2452
         (91 letters)



>d2d4ca1 a.238.1.1 (A:11-247) Endophilin-1 {Human (Homo sapiens)
           [TaxId: 9606]}
          Length = 237

 Score = 34.3 bits (78), Expect = 8e-04
 Identities = 31/100 (31%), Positives = 51/100 (51%), Gaps = 9/100 (9%)

Query: 1   MGESLKQMADVKYSLDDNTKQNFLEP--------RGPKSTLLTTAPLRLGKLYWRWESHS 52
           +GE+++++++VK SLD   KQNF++P             + L     +L      ++   
Sbjct: 107 VGEAMRELSEVKDSLDIEVKQNFIDPLQNLHDKDLREIQSALQHHLKKLEGRRLDFDYKK 166

Query: 53  SRWR-TSNDELKAAEEKFAESLHLAQMGMFNLLENDVSIA 91
            R     ++EL+ A EKF ES  +A+  MFNLLE D+   
Sbjct: 167 KRQGKIPDEELRQALEKFDESKEIAESSMFNLLEMDIEQV 206


>d1su7a_ e.26.1.2 (A:) Ni-containing carbon monoxide dehydrogenase
           {Carboxydothermus hydrogenoformans [TaxId: 129958]}
          Length = 633

 Score = 26.7 bits (59), Expect = 0.39
 Identities = 12/75 (16%), Positives = 21/75 (28%), Gaps = 10/75 (13%)

Query: 6   KQMADVKYSLDDNTKQNFLEPRGPKSTLLTTAPLRLGKLYWRWESHSSRWRTSNDELKAA 65
           ++  D+   +      +F E   P   + T  P           S               
Sbjct: 134 QKDEDIALEVAKAALADFHEKDTPVLWVTTVLP----------PSRVKVLSAHGLIPAGI 183

Query: 66  EEKFAESLHLAQMGM 80
           + + AE +H   MG 
Sbjct: 184 DHEIAEIMHRTSMGC 198


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.313    0.127    0.374 

Gapped
Lambda     K      H
   0.267   0.0523    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 303,687
Number of extensions: 10534
Number of successful extensions: 18
Number of sequences better than 10.0: 1
Number of HSP's gapped: 18
Number of HSP's successfully gapped: 3
Length of query: 91
Length of database: 2,407,596
Length adjustment: 55
Effective length of query: 36
Effective length of database: 1,652,446
Effective search space: 59488056
Effective search space used: 59488056
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 47 (22.4 bits)