BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy2455
(414 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1K7H|A Chain A, Crystal Structure Of Shrimp Alkaline Phosphatase
pdb|1K7H|B Chain B, Crystal Structure Of Shrimp Alkaline Phosphatase
Length = 476
Score = 170 bits (431), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 82/175 (46%), Positives = 115/175 (65%), Gaps = 1/175 (0%)
Query: 241 TAYLSGVKANYGTLGVSGLVTRNDCEAMRNESNHVDTIADWAQDCDKSTGLVTTTRVTHA 300
TAYL+GVK N G +G+ R +C +ES +IA W Q+ +STG+VT+TRVTHA
Sbjct: 91 TAYLTGVKTNQGVIGLDANTVRTNCSYQLDESLFTYSIAHWFQEAGRSTGVVTSTRVTHA 150
Query: 301 TPAALYAHTANREWESDKHVLKAKLDPRECEDIASQLITRSPGNKLNVIMGGGRANFLPE 360
TPA YAH A+R+WE+D V+ + DP C+DIA QL+ R PG VIMGGGR F PE
Sbjct: 151 TPAGTYAHVADRDWENDSDVVHDREDPEICDDIAEQLVFREPGKNFKVIMGGGRRGFFPE 210
Query: 361 FAMD-DEGHHGKRKDRRDLVDIWKQVKLRQGKSIAYVTNQTDLMKVNTSDTEYLL 414
A+D ++G G+R+D + L+ W K QG + +YV N+ DL+ V+ ++T+YL+
Sbjct: 211 EALDIEDGIPGEREDGKHLITDWLDDKASQGATASYVWNRDDLLAVDIANTDYLM 265
Score = 144 bits (364), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 100/283 (35%), Positives = 130/283 (45%), Gaps = 52/283 (18%)
Query: 5 DSIFWYEQGDSALKGLLERKLNEKKARNVILFLGDGMSLATITAARIYDGQQKGHSGEEA 64
D +W + AL L KL EK+A+NVI FLGDGMSL+T+TAARIY G G E
Sbjct: 3 DKAYWNKDAQDALDKQLGIKLREKQAKNVIFFLGDGMSLSTVTAARIYKGGLTGKF-ERE 61
Query: 65 QLSFENFPSTGLSKDCDKSTGLVTTTRVTHATPAALYAHTANREWESDKHVLKAKLDPRE 124
++S+E F LSK + +DK V
Sbjct: 62 KISWEEFDFAALSK-----------------------------TYNTDKQVT-------- 84
Query: 125 CEDIACRFRLYSYGLSVRSTLGVSGL---VTRNDCEAMRNESNHVDTIADWAQDCDKSTG 181
D A Y G V++ GV GL R +C +ES +IA W Q+ +STG
Sbjct: 85 --DSAASATAYLTG--VKTNQGVIGLDANTVRTNCSYQLDESLFTYSIAHWFQEAGRSTG 140
Query: 182 LVTTTRVTHATPAALYAHTANREWESDKHVLKAKLDPRECEDIASQLITRSPGNKLNVTT 241
+VT+TRVTHATPA YAH A+R+WE+D V+ + DP C+DIA QL+ R PG V
Sbjct: 141 VVTSTRVTHATPAGTYAHVADRDWENDSDVVHDREDPEICDDIAEQLVFREPGKNFKVIM 200
Query: 242 AYLSGVKANYGTLGVSGLVTRNDCEAMRNESNHVDTIADWAQD 284
G L + R + H+ I DW D
Sbjct: 201 G-----GGRRGFFPEEALDIEDGIPGEREDGKHL--ITDWLDD 236
>pdb|1SHN|A Chain A, Crystal Structure Of Shrimp Alkaline Phosphatase With
Phosphate Bound
pdb|1SHN|B Chain B, Crystal Structure Of Shrimp Alkaline Phosphatase With
Phosphate Bound
pdb|1SHQ|A Chain A, Crystal Structure Of Shrimp Alkaline Phosphatase With
Magnesium In M3
pdb|1SHQ|B Chain B, Crystal Structure Of Shrimp Alkaline Phosphatase With
Magnesium In M3
Length = 478
Score = 169 bits (428), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 82/175 (46%), Positives = 114/175 (65%), Gaps = 1/175 (0%)
Query: 241 TAYLSGVKANYGTLGVSGLVTRNDCEAMRNESNHVDTIADWAQDCDKSTGLVTTTRVTHA 300
TAYL+GVK N G +G+ R +C +ES +IA W Q+ +STG+VT+TRVTHA
Sbjct: 91 TAYLTGVKTNQGVIGLDANTVRTNCSYQLDESLFTYSIAHWFQEAGRSTGVVTSTRVTHA 150
Query: 301 TPAALYAHTANREWESDKHVLKAKLDPRECEDIASQLITRSPGNKLNVIMGGGRANFLPE 360
TPA YAH A+R+WE+D V+ + DP C+DIA QL+ R PG VIMGGGR F PE
Sbjct: 151 TPAGTYAHVADRDWENDSDVVHDREDPEICDDIAEQLVFREPGKNFKVIMGGGRRGFFPE 210
Query: 361 FAMD-DEGHHGKRKDRRDLVDIWKQVKLRQGKSIAYVTNQTDLMKVNTSDTEYLL 414
A+D ++G G+R+D + L+ W K QG + +YV N+ DL+ V+ +T+YL+
Sbjct: 211 EALDIEDGIPGEREDGKHLITDWLDDKASQGATASYVWNRDDLLAVDIRNTDYLM 265
Score = 144 bits (364), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 98/283 (34%), Positives = 131/283 (46%), Gaps = 52/283 (18%)
Query: 5 DSIFWYEQGDSALKGLLERKLNEKKARNVILFLGDGMSLATITAARIYDGQQKGHSGEEA 64
D +W + AL L KL EK+A+NVI FLGDGMSL+T+TAARIY G G E
Sbjct: 3 DKAYWNKDAQDALDKQLGIKLREKQAKNVIFFLGDGMSLSTVTAARIYKGGLTGKF-ERE 61
Query: 65 QLSFENFPSTGLSKDCDKSTGLVTTTRVTHATPAALYAHTANREWESDKHVLKAKLDPRE 124
++S+E F LSK + T +VT + +A
Sbjct: 62 KISWEEFDFAALSKTYN------TDKQVTDSAASAT------------------------ 91
Query: 125 CEDIACRFRLYSYGLSVRSTLGVSGL---VTRNDCEAMRNESNHVDTIADWAQDCDKSTG 181
+Y V++ GV GL R +C +ES +IA W Q+ +STG
Sbjct: 92 -----------AYLTGVKTNQGVIGLDANTVRTNCSYQLDESLFTYSIAHWFQEAGRSTG 140
Query: 182 LVTTTRVTHATPAALYAHTANREWESDKHVLKAKLDPRECEDIASQLITRSPGNKLNVTT 241
+VT+TRVTHATPA YAH A+R+WE+D V+ + DP C+DIA QL+ R PG V
Sbjct: 141 VVTSTRVTHATPAGTYAHVADRDWENDSDVVHDREDPEICDDIAEQLVFREPGKNFKVIM 200
Query: 242 AYLSGVKANYGTLGVSGLVTRNDCEAMRNESNHVDTIADWAQD 284
G L + R + H+ I DW D
Sbjct: 201 G-----GGRRGFFPEEALDIEDGIPGEREDGKHL--ITDWLDD 236
>pdb|1ZED|A Chain A, Alkaline Phosphatase From Human Placenta In Complex With
P- Nitrophenyl-Phosphonate
Length = 484
Score = 115 bits (287), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 73/172 (42%), Positives = 96/172 (55%), Gaps = 17/172 (9%)
Query: 241 TAYLSGVKANYGTLGVSGLVTRNDCEAMRNESNHVDTIADWAQDCDKSTGLVTTTRVTHA 300
TAYL GVK N+ T+G+S N C R N V ++ + A+ KS G+VTTTRV HA
Sbjct: 97 TAYLCGVKGNFQTIGLSAAARFNQCNTTRG--NEVISVMNRAKKAGKSVGVVTTTRVQHA 154
Query: 301 TPAALYAHTANREWESDKHVLKAKLDPRECEDIASQLITRSPGNKLNVIMGGGRANFL-- 358
+PA YAHT NR W SD V A C+DIA+QLI+ ++VI+GGGR
Sbjct: 155 SPAGTYAHTVNRNWYSDADV-PASARQEGCQDIATQLISNM---DIDVILGGGRKYMFRM 210
Query: 359 ----PEFAMDDEGHHGKRKDRRDLVDIWKQVKLRQGKSIAYVTNQTDLMKVN 406
PE+ DD G R D ++LV W + RQG YV N+T+LM+ +
Sbjct: 211 GTPDPEYP-DDYSQGGTRLDGKNLVQEW--LAKRQGAR--YVWNRTELMQAS 257
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 77/224 (34%), Positives = 103/224 (45%), Gaps = 43/224 (19%)
Query: 8 FWYEQGDSALKGLLERKLNEKKARNVILFLGDGMSLATITAARIYDGQQKGHSGEEAQLS 67
FW + AL + + + A+N+I+FLGDGM ++T+TAARI GQ+K G E L+
Sbjct: 11 FWNREAAEALGAAKKLQPAQTAAKNLIIFLGDGMGVSTVTAARILKGQKKDKLGPEIPLA 70
Query: 68 FENFPSTGLSKDCDKSTGLVTTTRVTHATPAALYAHTANREWESDKHVLKAKLDPRECED 127
+ FP LSK + DKHV D
Sbjct: 71 MDRFPYVALSK-----------------------------TYNVDKHV----------PD 91
Query: 128 IACRFRLYSYGLSVR-STLGVSGLVTRNDCEAMRNESNHVDTIADWAQDCDKSTGLVTTT 186
Y G+ T+G+S N C R N V ++ + A+ KS G+VTTT
Sbjct: 92 SGATATAYLCGVKGNFQTIGLSAAARFNQCNTTRG--NEVISVMNRAKKAGKSVGVVTTT 149
Query: 187 RVTHATPAALYAHTANREWESDKHVLKAKLDPRECEDIASQLIT 230
RV HA+PA YAHT NR W SD V A C+DIA+QLI+
Sbjct: 150 RVQHASPAGTYAHTVNRNWYSDADV-PASARQEGCQDIATQLIS 192
>pdb|1EW2|A Chain A, Crystal Structure Of A Human Phosphatase
Length = 513
Score = 115 bits (287), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 73/172 (42%), Positives = 96/172 (55%), Gaps = 17/172 (9%)
Query: 241 TAYLSGVKANYGTLGVSGLVTRNDCEAMRNESNHVDTIADWAQDCDKSTGLVTTTRVTHA 300
TAYL GVK N+ T+G+S N C R N V ++ + A+ KS G+VTTTRV HA
Sbjct: 97 TAYLCGVKGNFQTIGLSAAARFNQCNTTRG--NEVISVMNRAKKAGKSVGVVTTTRVQHA 154
Query: 301 TPAALYAHTANREWESDKHVLKAKLDPRECEDIASQLITRSPGNKLNVIMGGGRANFL-- 358
+PA YAHT NR W SD V A C+DIA+QLI+ ++VI+GGGR
Sbjct: 155 SPAGTYAHTVNRNWYSDADV-PASARQEGCQDIATQLISNM---DIDVILGGGRKYMFRM 210
Query: 359 ----PEFAMDDEGHHGKRKDRRDLVDIWKQVKLRQGKSIAYVTNQTDLMKVN 406
PE+ DD G R D ++LV W + RQG YV N+T+LM+ +
Sbjct: 211 GTPDPEYP-DDYSQGGTRLDGKNLVQEW--LAKRQGAR--YVWNRTELMQAS 257
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 77/224 (34%), Positives = 103/224 (45%), Gaps = 43/224 (19%)
Query: 8 FWYEQGDSALKGLLERKLNEKKARNVILFLGDGMSLATITAARIYDGQQKGHSGEEAQLS 67
FW + AL + + + A+N+I+FLGDGM ++T+TAARI GQ+K G E L+
Sbjct: 11 FWNREAAEALGAAKKLQPAQTAAKNLIIFLGDGMGVSTVTAARILKGQKKDKLGPEIPLA 70
Query: 68 FENFPSTGLSKDCDKSTGLVTTTRVTHATPAALYAHTANREWESDKHVLKAKLDPRECED 127
+ FP LSK + DKHV D
Sbjct: 71 MDRFPYVALSK-----------------------------TYNVDKHV----------PD 91
Query: 128 IACRFRLYSYGLSVR-STLGVSGLVTRNDCEAMRNESNHVDTIADWAQDCDKSTGLVTTT 186
Y G+ T+G+S N C R N V ++ + A+ KS G+VTTT
Sbjct: 92 SGATATAYLCGVKGNFQTIGLSAAARFNQCNTTRG--NEVISVMNRAKKAGKSVGVVTTT 149
Query: 187 RVTHATPAALYAHTANREWESDKHVLKAKLDPRECEDIASQLIT 230
RV HA+PA YAHT NR W SD V A C+DIA+QLI+
Sbjct: 150 RVQHASPAGTYAHTVNRNWYSDADV-PASARQEGCQDIATQLIS 192
>pdb|3MK0|A Chain A, Refinement Of Placental Alkaline Phosphatase Complexed
With Nitrophenyl
pdb|3MK1|A Chain A, Refinement Of Placental Alkaline Phosphatase Complexed
With Nitrophenyl
pdb|3MK2|A Chain A, Placental Alkaline Phosphatase Complexed With Phe
pdb|2GLQ|A Chain A, X-Ray Structure Of Human Alkaline Phosphatase In Complex
With Strontium
pdb|1ZEF|A Chain A, Structure Of Alkaline Phosphatase From Human Placenta In
Complex With Its Uncompetitive Inhibitor L-Phe
pdb|1ZEB|A Chain A, X-ray Structure Of Alkaline Phosphatase From Human
Placenta In Complex With 5'-amp
Length = 484
Score = 115 bits (287), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 73/172 (42%), Positives = 96/172 (55%), Gaps = 17/172 (9%)
Query: 241 TAYLSGVKANYGTLGVSGLVTRNDCEAMRNESNHVDTIADWAQDCDKSTGLVTTTRVTHA 300
TAYL GVK N+ T+G+S N C R N V ++ + A+ KS G+VTTTRV HA
Sbjct: 97 TAYLCGVKGNFQTIGLSAAARFNQCNTTRG--NEVISVMNRAKKAGKSVGVVTTTRVQHA 154
Query: 301 TPAALYAHTANREWESDKHVLKAKLDPRECEDIASQLITRSPGNKLNVIMGGGRANFL-- 358
+PA YAHT NR W SD V A C+DIA+QLI+ ++VI+GGGR
Sbjct: 155 SPAGTYAHTVNRNWYSDADV-PASARQEGCQDIATQLISNM---DIDVILGGGRKYMFRM 210
Query: 359 ----PEFAMDDEGHHGKRKDRRDLVDIWKQVKLRQGKSIAYVTNQTDLMKVN 406
PE+ DD G R D ++LV W + RQG YV N+T+LM+ +
Sbjct: 211 GTPDPEYP-DDYSQGGTRLDGKNLVQEW--LAKRQGAR--YVWNRTELMQAS 257
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 77/224 (34%), Positives = 103/224 (45%), Gaps = 43/224 (19%)
Query: 8 FWYEQGDSALKGLLERKLNEKKARNVILFLGDGMSLATITAARIYDGQQKGHSGEEAQLS 67
FW + AL + + + A+N+I+FLGDGM ++T+TAARI GQ+K G E L+
Sbjct: 11 FWNREAAEALGAAKKLQPAQTAAKNLIIFLGDGMGVSTVTAARILKGQKKDKLGPEIPLA 70
Query: 68 FENFPSTGLSKDCDKSTGLVTTTRVTHATPAALYAHTANREWESDKHVLKAKLDPRECED 127
+ FP LSK + DKHV D
Sbjct: 71 MDRFPYVALSK-----------------------------TYNVDKHV----------PD 91
Query: 128 IACRFRLYSYGLSVR-STLGVSGLVTRNDCEAMRNESNHVDTIADWAQDCDKSTGLVTTT 186
Y G+ T+G+S N C R N V ++ + A+ KS G+VTTT
Sbjct: 92 XGATATAYLCGVKGNFQTIGLSAAARFNQCNTTRG--NEVISVMNRAKKAGKSVGVVTTT 149
Query: 187 RVTHATPAALYAHTANREWESDKHVLKAKLDPRECEDIASQLIT 230
RV HA+PA YAHT NR W SD V A C+DIA+QLI+
Sbjct: 150 RVQHASPAGTYAHTVNRNWYSDADV-PASARQEGCQDIATQLIS 192
>pdb|3E2D|A Chain A, The 1.4 A Crystal Structure Of The Large And Cold-Active
Vibrio Sp. Alkaline Phosphatase
pdb|3E2D|B Chain B, The 1.4 A Crystal Structure Of The Large And Cold-Active
Vibrio Sp. Alkaline Phosphatase
Length = 502
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 77/141 (54%), Gaps = 20/141 (14%)
Query: 253 TLGVSGLVTRNDCEAMRNESNHVDTIADWAQDCDKSTGLVTTTRVTHATPAALYAHTANR 312
T+ +G+ + ++ + ++ NHV+T+ + A+ K+TGLV+ TR+THATPA+ AH +R
Sbjct: 70 TMLATGIYSSSEVIGIDSQGNHVETVLEKAKKAGKATGLVSDTRLTHATPASFAAHQPHR 129
Query: 313 EWESDKHVLKAKLDPRECEDIASQLITRSPGNKLNVIMGGGRANFLPEFAMDDEGHHGKR 372
E+ IAS ++ +V++ GG +++P+ + +D+G K+
Sbjct: 130 SLEN---------------QIASDMLATGA----DVMLSGGLRHWIPK-STNDKGETYKQ 169
Query: 373 KDRRDLVDIWKQVKLRQGKSI 393
++ D++ + K + +++
Sbjct: 170 LEKLTQGDVYLKSKRKDDRNL 190
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 44/65 (67%)
Query: 143 STLGVSGLVTRNDCEAMRNESNHVDTIADWAQDCDKSTGLVTTTRVTHATPAALYAHTAN 202
+T+ +G+ + ++ + ++ NHV+T+ + A+ K+TGLV+ TR+THATPA+ AH +
Sbjct: 69 ATMLATGIYSSSEVIGIDSQGNHVETVLEKAKKAGKATGLVSDTRLTHATPASFAAHQPH 128
Query: 203 REWES 207
R E+
Sbjct: 129 RSLEN 133
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 25/35 (71%)
Query: 77 SKDCDKSTGLVTTTRVTHATPAALYAHTANREWES 111
+K K+TGLV+ TR+THATPA+ AH +R E+
Sbjct: 99 AKKAGKATGLVSDTRLTHATPASFAAHQPHRSLEN 133
>pdb|2IUC|A Chain A, Structure Of Alkaline Phosphatase From The Antarctic
Bacterium Tab5
Length = 375
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 57/126 (45%), Gaps = 31/126 (24%)
Query: 258 GLVTRNDCEAMRNESNHVDTIADWAQDCDKSTGLVTTTRVTHATPAALYAHTANREWESD 317
G+ T N + ++S V +I + A + TG+V T+ +THATPA+ YAH NR E
Sbjct: 94 GIKTYNAAIGVADDSTAVKSIVEIAALNNIKTGVVATSSITHATPASFYAHALNRGLE-- 151
Query: 318 KHVLKAKLDPRECEDIASQLITRSPGNKLNVIMGGGRANFLPEFAMDDEGHHGKRKDRRD 377
E+IA + T S L+ GGG F RKD++D
Sbjct: 152 -------------EEIAMDM-TES---DLDFFAGGGLNYFT------------SRKDKKD 182
Query: 378 LVDIWK 383
++ I K
Sbjct: 183 VLAILK 188
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 35/60 (58%)
Query: 149 GLVTRNDCEAMRNESNHVDTIADWAQDCDKSTGLVTTTRVTHATPAALYAHTANREWESD 208
G+ T N + ++S V +I + A + TG+V T+ +THATPA+ YAH NR E +
Sbjct: 94 GIKTYNAAIGVADDSTAVKSIVEIAALNNIKTGVVATSSITHATPASFYAHALNRGLEEE 153
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 21/29 (72%)
Query: 84 TGLVTTTRVTHATPAALYAHTANREWESD 112
TG+V T+ +THATPA+ YAH NR E +
Sbjct: 125 TGVVATSSITHATPASFYAHALNRGLEEE 153
>pdb|2W5X|A Chain A, Structure Of Tab5 Alkaline Phosphatase Mutant His 135 Glu
With Mg Bound In The M3 Site.
pdb|2W5X|B Chain B, Structure Of Tab5 Alkaline Phosphatase Mutant His 135 Glu
With Mg Bound In The M3 Site
Length = 375
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 57/126 (45%), Gaps = 31/126 (24%)
Query: 258 GLVTRNDCEAMRNESNHVDTIADWAQDCDKSTGLVTTTRVTHATPAALYAHTANREWESD 317
G+ T N + ++S V +I + A + TG+V T+ +T ATPA+ YAH NR E
Sbjct: 94 GIKTYNAAIGVADDSTAVKSIVEIAALNNIKTGVVATSSITEATPASFYAHALNRGLE-- 151
Query: 318 KHVLKAKLDPRECEDIASQLITRSPGNKLNVIMGGGRANFLPEFAMDDEGHHGKRKDRRD 377
E+IA + T S L+ GGG F KRKD++D
Sbjct: 152 -------------EEIAMDM-TES---DLDFFAGGGLNYFT------------KRKDKKD 182
Query: 378 LVDIWK 383
++ I K
Sbjct: 183 VLAILK 188
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 34/60 (56%)
Query: 149 GLVTRNDCEAMRNESNHVDTIADWAQDCDKSTGLVTTTRVTHATPAALYAHTANREWESD 208
G+ T N + ++S V +I + A + TG+V T+ +T ATPA+ YAH NR E +
Sbjct: 94 GIKTYNAAIGVADDSTAVKSIVEIAALNNIKTGVVATSSITEATPASFYAHALNRGLEEE 153
Score = 37.4 bits (85), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 20/29 (68%)
Query: 84 TGLVTTTRVTHATPAALYAHTANREWESD 112
TG+V T+ +T ATPA+ YAH NR E +
Sbjct: 125 TGVVATSSITEATPASFYAHALNRGLEEE 153
>pdb|2W5V|A Chain A, Structure Of Tab5 Alkaline Phosphatase Mutant His 135 Asp
With Mg Bound In The M3 Site.
pdb|2W5V|B Chain B, Structure Of Tab5 Alkaline Phosphatase Mutant His 135 Asp
With Mg Bound In The M3 Site.
pdb|2W5W|A Chain A, Structure Of Tab5 Alkaline Phosphatase Mutant His 135 Asp
With Zn Bound In The M3 Site.
pdb|2W5W|B Chain B, Structure Of Tab5 Alkaline Phosphatase Mutant His 135 Asp
With Zn Bound In The M3 Site
Length = 375
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 57/126 (45%), Gaps = 31/126 (24%)
Query: 258 GLVTRNDCEAMRNESNHVDTIADWAQDCDKSTGLVTTTRVTHATPAALYAHTANREWESD 317
G+ T N + ++S V +I + A + TG+V T+ +T ATPA+ YAH NR E
Sbjct: 94 GIKTYNAAIGVADDSTAVKSIVEIAALNNIKTGVVATSSITDATPASFYAHALNRGLE-- 151
Query: 318 KHVLKAKLDPRECEDIASQLITRSPGNKLNVIMGGGRANFLPEFAMDDEGHHGKRKDRRD 377
E+IA + T S L+ GGG F KRKD++D
Sbjct: 152 -------------EEIAMDM-TES---DLDFFAGGGLNYFT------------KRKDKKD 182
Query: 378 LVDIWK 383
++ I K
Sbjct: 183 VLAILK 188
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 34/60 (56%)
Query: 149 GLVTRNDCEAMRNESNHVDTIADWAQDCDKSTGLVTTTRVTHATPAALYAHTANREWESD 208
G+ T N + ++S V +I + A + TG+V T+ +T ATPA+ YAH NR E +
Sbjct: 94 GIKTYNAAIGVADDSTAVKSIVEIAALNNIKTGVVATSSITDATPASFYAHALNRGLEEE 153
Score = 37.0 bits (84), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 20/29 (68%)
Query: 84 TGLVTTTRVTHATPAALYAHTANREWESD 112
TG+V T+ +T ATPA+ YAH NR E +
Sbjct: 125 TGVVATSSITDATPASFYAHALNRGLEEE 153
>pdb|1KHJ|A Chain A, E. Coli Alkaline Phosphatase Mutant (D153hd330n) Mimic Of
The Transition States With Aluminium Fluoride
pdb|1KHJ|B Chain B, E. Coli Alkaline Phosphatase Mutant (D153hd330n) Mimic Of
The Transition States With Aluminium Fluoride
pdb|1KHK|A Chain A, E. Coli Alkaline Phosphatase Mutant (D153hd330n)
pdb|1KHK|B Chain B, E. Coli Alkaline Phosphatase Mutant (D153hd330n)
pdb|1KHL|A Chain A, E. Coli Alkaline Phosphatase Mutant (D153hd330n) Complex
With Phosphate
pdb|1KHL|B Chain B, E. Coli Alkaline Phosphatase Mutant (D153hd330n) Complex
With Phosphate
pdb|1KHN|A Chain A, E. Coli Alkaline Phosphatase Mutant (D153hd330n) Zinc Form
pdb|1KHN|B Chain B, E. Coli Alkaline Phosphatase Mutant (D153hd330n) Zinc Form
Length = 449
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 77/186 (41%), Gaps = 53/186 (28%)
Query: 21 LERKLNEKKARNVILFLGDGMSLATITAARIY-DGQQKGHSGEEAQLSFENFPSTGLSKD 79
L L++K A+N+IL +GDGM + ITAAR Y +G + G K
Sbjct: 33 LRNSLSDKPAKNIILLIGDGMGDSEITAARNYAEG------------------AGGFFKG 74
Query: 80 CDKSTGLVTTTRVTHATPAALYAHTANREWESDKHVLKAKLDPRECEDIACRFRLYSYGL 139
D L T + TH YA + K P D A +S G+
Sbjct: 75 ID---ALPLTGQYTH------YA------------LNKKTGKPDYVTDSAASATAWSTGV 113
Query: 140 -SVRSTLGVSGLVTRNDCEAMRNESNHVDTIADWAQDCDKSTGLVTTTRVTHATPAALYA 198
+ LGV +E +H TI + A+ +TG V+T + HATPAAL A
Sbjct: 114 KTYNGALGVD-----------IHEKDH-PTILEMAKAAGLATGNVSTAELQHATPAALVA 161
Query: 199 HTANRE 204
H +R+
Sbjct: 162 HVTSRK 167
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 55/121 (45%), Gaps = 20/121 (16%)
Query: 241 TAYLSGVKANYGTLGVSGLVTRNDCEAMRNESNHVDTIADWAQDCDKSTGLVTTTRVTHA 300
TA+ +GVK G LGV +E +H TI + A+ +TG V+T + HA
Sbjct: 107 TAWSTGVKTYNGALGVD-----------IHEKDH-PTILEMAKAAGLATGNVSTAELQHA 154
Query: 301 TPAALYAHTANREW----ESDKHVLKAKLDPRECEDIASQLITRSPGNKLNVIMGGGRAN 356
TPAAL AH +R+ + + L+ I QL+ + +V +GGG
Sbjct: 155 TPAALVAHVTSRKCYGPSATSQKCPGNALEKGGKGSITEQLLNA----RADVTLGGGAKT 210
Query: 357 F 357
F
Sbjct: 211 F 211
>pdb|2IUC|B Chain B, Structure Of Alkaline Phosphatase From The Antarctic
Bacterium Tab5
Length = 375
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 34/60 (56%)
Query: 149 GLVTRNDCEAMRNESNHVDTIADWAQDCDKSTGLVTTTRVTHATPAALYAHTANREWESD 208
G+ T N + ++S V +I + A TG+V T+ +THATPA+ YAH NR E +
Sbjct: 94 GIKTYNAAIGVADDSTAVKSIVEIAALNSIKTGVVATSSITHATPASFYAHALNRGLEEE 153
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 34/60 (56%)
Query: 258 GLVTRNDCEAMRNESNHVDTIADWAQDCDKSTGLVTTTRVTHATPAALYAHTANREWESD 317
G+ T N + ++S V +I + A TG+V T+ +THATPA+ YAH NR E +
Sbjct: 94 GIKTYNAAIGVADDSTAVKSIVEIAALNSIKTGVVATSSITHATPASFYAHALNRGLEEE 153
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 21/29 (72%)
Query: 84 TGLVTTTRVTHATPAALYAHTANREWESD 112
TG+V T+ +THATPA+ YAH NR E +
Sbjct: 125 TGVVATSSITHATPASFYAHALNRGLEEE 153
>pdb|1Y7A|A Chain A, Structure Of D153hK328W E. COLI ALKALINE PHOSPHATASE IN
Presence Of Cobalt At 1.77 A Resolution
pdb|1Y7A|B Chain B, Structure Of D153hK328W E. COLI ALKALINE PHOSPHATASE IN
Presence Of Cobalt At 1.77 A Resolution
Length = 449
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 77/185 (41%), Gaps = 51/185 (27%)
Query: 21 LERKLNEKKARNVILFLGDGMSLATITAARIYDGQQKGHSGEEAQLSFENFPSTGLSKDC 80
L L++K A+N+IL +GDGM + ITAAR Y +G + G K
Sbjct: 33 LRDSLSDKPAKNIILLIGDGMGDSEITAARNY---AEG--------------AGGFFKGI 75
Query: 81 DKSTGLVTTTRVTHATPAALYAHTANREWESDKHVLKAKLDPRECEDIACRFRLYSYGL- 139
D L T + TH YA + K P D A +S G+
Sbjct: 76 D---ALPLTGQYTH------YA------------LNKKTGKPDYVTDSAASATAWSTGVK 114
Query: 140 SVRSTLGVSGLVTRNDCEAMRNESNHVDTIADWAQDCDKSTGLVTTTRVTHATPAALYAH 199
+ LGV +E +H TI + A+ +TG V+T + HATPAAL AH
Sbjct: 115 TYNGALGVD-----------IHEKDH-PTILEMAKAAGLATGNVSTAELQHATPAALVAH 162
Query: 200 TANRE 204
+R+
Sbjct: 163 VTSRK 167
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 39/73 (53%), Gaps = 12/73 (16%)
Query: 241 TAYLSGVKANYGTLGVSGLVTRNDCEAMRNESNHVDTIADWAQDCDKSTGLVTTTRVTHA 300
TA+ +GVK G LGV +E +H TI + A+ +TG V+T + HA
Sbjct: 107 TAWSTGVKTYNGALGVD-----------IHEKDH-PTILEMAKAAGLATGNVSTAELQHA 154
Query: 301 TPAALYAHTANRE 313
TPAAL AH +R+
Sbjct: 155 TPAALVAHVTSRK 167
>pdb|2ANH|A Chain A, Alkaline Phosphatase (D153h)
pdb|2ANH|B Chain B, Alkaline Phosphatase (D153h)
Length = 446
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 77/185 (41%), Gaps = 51/185 (27%)
Query: 21 LERKLNEKKARNVILFLGDGMSLATITAARIYDGQQKGHSGEEAQLSFENFPSTGLSKDC 80
L L++K A+N+IL +GDGM + ITAAR Y +G + G K
Sbjct: 30 LRDSLSDKPAKNIILLIGDGMGDSEITAARNY---AEG--------------AGGFFKGI 72
Query: 81 DKSTGLVTTTRVTHATPAALYAHTANREWESDKHVLKAKLDPRECEDIACRFRLYSYGL- 139
D L T + TH YA + K P D A +S G+
Sbjct: 73 D---ALPLTGQYTH------YA------------LNKKTGKPDYVTDSAASATAWSTGVK 111
Query: 140 SVRSTLGVSGLVTRNDCEAMRNESNHVDTIADWAQDCDKSTGLVTTTRVTHATPAALYAH 199
+ LGV +E +H TI + A+ +TG V+T + HATPAAL AH
Sbjct: 112 TYNGALGVD-----------IHEKDH-PTILEMAKAAGLATGNVSTAELQHATPAALVAH 159
Query: 200 TANRE 204
+R+
Sbjct: 160 VTSRK 164
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 39/73 (53%), Gaps = 12/73 (16%)
Query: 241 TAYLSGVKANYGTLGVSGLVTRNDCEAMRNESNHVDTIADWAQDCDKSTGLVTTTRVTHA 300
TA+ +GVK G LGV +E +H TI + A+ +TG V+T + HA
Sbjct: 104 TAWSTGVKTYNGALGVD-----------IHEKDH-PTILEMAKAAGLATGNVSTAELQHA 151
Query: 301 TPAALYAHTANRE 313
TPAAL AH +R+
Sbjct: 152 TPAALVAHVTSRK 164
>pdb|1ANI|A Chain A, Alkaline Phosphatase (D153h, K328h)
pdb|1ANI|B Chain B, Alkaline Phosphatase (D153h, K328h)
Length = 446
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 77/185 (41%), Gaps = 51/185 (27%)
Query: 21 LERKLNEKKARNVILFLGDGMSLATITAARIYDGQQKGHSGEEAQLSFENFPSTGLSKDC 80
L L++K A+N+IL +GDGM + ITAAR Y +G + G K
Sbjct: 30 LRDSLSDKPAKNIILLIGDGMGDSEITAARNY---AEG--------------AGGFFKGI 72
Query: 81 DKSTGLVTTTRVTHATPAALYAHTANREWESDKHVLKAKLDPRECEDIACRFRLYSYGL- 139
D L T + TH YA + K P D A +S G+
Sbjct: 73 D---ALPLTGQYTH------YA------------LNKKTGKPDYVTDSAASATAWSTGVK 111
Query: 140 SVRSTLGVSGLVTRNDCEAMRNESNHVDTIADWAQDCDKSTGLVTTTRVTHATPAALYAH 199
+ LGV +E +H TI + A+ +TG V+T + HATPAAL AH
Sbjct: 112 TYNGALGVD-----------IHEKDH-PTILEMAKAAGLATGNVSTAELQHATPAALVAH 159
Query: 200 TANRE 204
+R+
Sbjct: 160 VTSRK 164
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 39/73 (53%), Gaps = 12/73 (16%)
Query: 241 TAYLSGVKANYGTLGVSGLVTRNDCEAMRNESNHVDTIADWAQDCDKSTGLVTTTRVTHA 300
TA+ +GVK G LGV +E +H TI + A+ +TG V+T + HA
Sbjct: 104 TAWSTGVKTYNGALGVD-----------IHEKDH-PTILEMAKAAGLATGNVSTAELQHA 151
Query: 301 TPAALYAHTANRE 313
TPAAL AH +R+
Sbjct: 152 TPAALVAHVTSRK 164
>pdb|2X98|A Chain A, H.Salinarum Alkaline Phosphatase
pdb|2X98|B Chain B, H.Salinarum Alkaline Phosphatase
Length = 431
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 53/113 (46%), Gaps = 26/113 (23%)
Query: 245 SGVKANYGTLGVSGLVTRNDCEAMRNESNHVDTIADWAQDCDKSTGLVTTTRVTHATPAA 304
SGVK G +G G+ T VDT+ + A +TGL+TTT THATPAA
Sbjct: 81 SGVKTYNGAIG--GVQTSG------GGFQRVDTVLERASAQGYATGLITTTEATHATPAA 132
Query: 305 LYAHTANREWESDKHVLKAKLDPRECEDIASQLITRSPGNKLNVIMGGGRANF 357
AH +R ++ +IA Q I + + +VI+GG R +F
Sbjct: 133 FAAHVEDRGNQT---------------EIARQYIEET---QPDVILGGQRRDF 167
Score = 41.6 bits (96), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 25/38 (65%)
Query: 166 VDTIADWAQDCDKSTGLVTTTRVTHATPAALYAHTANR 203
VDT+ + A +TGL+TTT THATPAA AH +R
Sbjct: 103 VDTVLERASAQGYATGLITTTEATHATPAAFAAHVEDR 140
Score = 37.0 bits (84), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 16/25 (64%), Positives = 19/25 (76%)
Query: 83 STGLVTTTRVTHATPAALYAHTANR 107
+TGL+TTT THATPAA AH +R
Sbjct: 116 ATGLITTTEATHATPAAFAAHVEDR 140
>pdb|3DPC|A Chain A, Structure Of E.Coli Alkaline Phosphatase Mutant In Complex
With A Phosphorylated Peptide
pdb|3DPC|B Chain B, Structure Of E.Coli Alkaline Phosphatase Mutant In Complex
With A Phosphorylated Peptide
Length = 455
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 77/185 (41%), Gaps = 51/185 (27%)
Query: 21 LERKLNEKKARNVILFLGDGMSLATITAARIYDGQQKGHSGEEAQLSFENFPSTGLSKDC 80
L L++K A+N+IL +GDGM + ITAAR Y +G + G K
Sbjct: 33 LRDSLSDKPAKNIILLIGDGMGDSEITAARNY---AEG--------------AGGFFKGI 75
Query: 81 DKSTGLVTTTRVTHATPAALYAHTANREWESDKHVLKAKLDPRECEDIACRFRLYSYGL- 139
D L T + TH YA + K P D+A +S G+
Sbjct: 76 D---ALPLTGQYTH------YA------------LNKKTGKPDYVTDLAASATAWSTGVK 114
Query: 140 SVRSTLGVSGLVTRNDCEAMRNESNHVDTIADWAQDCDKSTGLVTTTRVTHATPAALYAH 199
+ LGV +E +H TI + A+ +TG V+T + ATPAAL AH
Sbjct: 115 TYNGALGVD-----------IHEKDH-PTILEMAKAAGLATGNVSTAELQDATPAALVAH 162
Query: 200 TANRE 204
+R+
Sbjct: 163 VTSRK 167
Score = 36.2 bits (82), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 38/73 (52%), Gaps = 12/73 (16%)
Query: 241 TAYLSGVKANYGTLGVSGLVTRNDCEAMRNESNHVDTIADWAQDCDKSTGLVTTTRVTHA 300
TA+ +GVK G LGV +E +H TI + A+ +TG V+T + A
Sbjct: 107 TAWSTGVKTYNGALGVD-----------IHEKDH-PTILEMAKAAGLATGNVSTAELQDA 154
Query: 301 TPAALYAHTANRE 313
TPAAL AH +R+
Sbjct: 155 TPAALVAHVTSRK 167
>pdb|1ELY|A Chain A, E. Coli Alkaline Phosphatase Mutant (S102c)
pdb|1ELY|B Chain B, E. Coli Alkaline Phosphatase Mutant (S102c)
Length = 449
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 77/184 (41%), Gaps = 49/184 (26%)
Query: 21 LERKLNEKKARNVILFLGDGMSLATITAARIYDGQQKGHSGEEAQLSFENFPSTGLSKDC 80
L L++K A+N+IL +GDGM + ITAAR Y +G + G K
Sbjct: 33 LRDSLSDKPAKNIILLIGDGMGDSEITAARNY---AEG--------------AGGFFKGI 75
Query: 81 DKSTGLVTTTRVTHATPAALYAHTANREWESDKHVLKAKLDPRECEDIACRFRLYSYGLS 140
D L T + TH AL T ++ +D C ++
Sbjct: 76 D---ALPLTGQYTH---YALNKKTGKPDYVTD-----------------CAASATAWSTG 112
Query: 141 VRSTLGVSGLVTRNDCEAMRNESNHVDTIADWAQDCDKSTGLVTTTRVTHATPAALYAHT 200
V++ G G+ +E +H TI + A+ +TG V+T + ATPAAL AH
Sbjct: 113 VKTYNGALGVDI--------HEKDH-PTILEMAKAAGLATGNVSTAELQDATPAALVAHV 163
Query: 201 ANRE 204
+R+
Sbjct: 164 TSRK 167
Score = 36.2 bits (82), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 38/73 (52%), Gaps = 12/73 (16%)
Query: 241 TAYLSGVKANYGTLGVSGLVTRNDCEAMRNESNHVDTIADWAQDCDKSTGLVTTTRVTHA 300
TA+ +GVK G LGV +E +H TI + A+ +TG V+T + A
Sbjct: 107 TAWSTGVKTYNGALGVD-----------IHEKDH-PTILEMAKAAGLATGNVSTAELQDA 154
Query: 301 TPAALYAHTANRE 313
TPAAL AH +R+
Sbjct: 155 TPAALVAHVTSRK 167
>pdb|2G9Y|A Chain A, Structure Of S102t E. Coli Alkaline Phosphatase In
Presence Of Phosphate At 2.00 A Resolution
pdb|2G9Y|B Chain B, Structure Of S102t E. Coli Alkaline Phosphatase In
Presence Of Phosphate At 2.00 A Resolution
Length = 449
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 76/185 (41%), Gaps = 51/185 (27%)
Query: 21 LERKLNEKKARNVILFLGDGMSLATITAARIYDGQQKGHSGEEAQLSFENFPSTGLSKDC 80
L L++K A+N+IL +GDGM + ITAAR Y +G + G K
Sbjct: 33 LRDSLSDKPAKNIILLIGDGMGDSEITAARNY---AEG--------------AGGFFKGI 75
Query: 81 DKSTGLVTTTRVTHATPAALYAHTANREWESDKHVLKAKLDPRECEDIACRFRLYSYGL- 139
D L T + TH YA + K P D A +S G+
Sbjct: 76 D---ALPLTGQYTH------YA------------LNKKTGKPDYVTDTAASATAWSTGVK 114
Query: 140 SVRSTLGVSGLVTRNDCEAMRNESNHVDTIADWAQDCDKSTGLVTTTRVTHATPAALYAH 199
+ LGV +E +H TI + A+ +TG V+T + ATPAAL AH
Sbjct: 115 TYNGALGVD-----------IHEKDH-PTILEMAKAAGLATGNVSTAELQDATPAALVAH 162
Query: 200 TANRE 204
+R+
Sbjct: 163 VTSRK 167
Score = 36.2 bits (82), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 38/73 (52%), Gaps = 12/73 (16%)
Query: 241 TAYLSGVKANYGTLGVSGLVTRNDCEAMRNESNHVDTIADWAQDCDKSTGLVTTTRVTHA 300
TA+ +GVK G LGV +E +H TI + A+ +TG V+T + A
Sbjct: 107 TAWSTGVKTYNGALGVD-----------IHEKDH-PTILEMAKAAGLATGNVSTAELQDA 154
Query: 301 TPAALYAHTANRE 313
TPAAL AH +R+
Sbjct: 155 TPAALVAHVTSRK 167
>pdb|1ALK|A Chain A, Reaction Mechanism Of Alkaline Phosphatase Based On
Crystal Structures. Two Metal Ion Catalysis
pdb|1ALK|B Chain B, Reaction Mechanism Of Alkaline Phosphatase Based On
Crystal Structures. Two Metal Ion Catalysis
Length = 449
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 76/185 (41%), Gaps = 51/185 (27%)
Query: 21 LERKLNEKKARNVILFLGDGMSLATITAARIYDGQQKGHSGEEAQLSFENFPSTGLSKDC 80
L L++K A+N+IL +GDGM + ITAAR Y +G + G K
Sbjct: 33 LRNSLSDKPAKNIILLIGDGMGDSEITAARNY---AEG--------------AGGFFKGI 75
Query: 81 DKSTGLVTTTRVTHATPAALYAHTANREWESDKHVLKAKLDPRECEDIACRFRLYSYGL- 139
D L T + TH YA + K P D A +S G+
Sbjct: 76 D---ALPLTGQYTH------YA------------LNKKTGKPDYVTDSAASATAWSTGVK 114
Query: 140 SVRSTLGVSGLVTRNDCEAMRNESNHVDTIADWAQDCDKSTGLVTTTRVTHATPAALYAH 199
+ LGV +E +H TI + A+ +TG V+T + ATPAAL AH
Sbjct: 115 TYNGALGVD-----------IHEKDH-PTILEMAKAAGLATGNVSTAELQDATPAALVAH 162
Query: 200 TANRE 204
+R+
Sbjct: 163 VTSRK 167
Score = 36.2 bits (82), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 54/121 (44%), Gaps = 20/121 (16%)
Query: 241 TAYLSGVKANYGTLGVSGLVTRNDCEAMRNESNHVDTIADWAQDCDKSTGLVTTTRVTHA 300
TA+ +GVK G LGV +E +H TI + A+ +TG V+T + A
Sbjct: 107 TAWSTGVKTYNGALGVD-----------IHEKDH-PTILEMAKAAGLATGNVSTAELQDA 154
Query: 301 TPAALYAHTANREW----ESDKHVLKAKLDPRECEDIASQLITRSPGNKLNVIMGGGRAN 356
TPAAL AH +R+ + + L+ I QL+ + +V +GGG
Sbjct: 155 TPAALVAHVTSRKCYGPSATSQKCPGNALEKGGKGSITEQLLNA----RADVTLGGGAKT 210
Query: 357 F 357
F
Sbjct: 211 F 211
>pdb|1KH7|A Chain A, E. Coli Alkaline Phosphatase Mutant (D153gd330n)
pdb|1KH7|B Chain B, E. Coli Alkaline Phosphatase Mutant (D153gd330n)
Length = 449
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 76/186 (40%), Gaps = 53/186 (28%)
Query: 21 LERKLNEKKARNVILFLGDGMSLATITAARIY-DGQQKGHSGEEAQLSFENFPSTGLSKD 79
L L++K A+N+IL +GDGM + ITAAR Y +G + G K
Sbjct: 33 LRNSLSDKPAKNIILLIGDGMGDSEITAARNYAEG------------------AGGFFKG 74
Query: 80 CDKSTGLVTTTRVTHATPAALYAHTANREWESDKHVLKAKLDPRECEDIACRFRLYSYGL 139
D L T + TH YA + K P D A +S G+
Sbjct: 75 ID---ALPLTGQYTH------YA------------LNKKTGKPDYVTDSAASATAWSTGV 113
Query: 140 -SVRSTLGVSGLVTRNDCEAMRNESNHVDTIADWAQDCDKSTGLVTTTRVTHATPAALYA 198
+ LGV +E +H TI + A+ +TG V+T + ATPAAL A
Sbjct: 114 KTYNGALGVD-----------IHEKDH-PTILEMAKAAGLATGNVSTAELQGATPAALVA 161
Query: 199 HTANRE 204
H +R+
Sbjct: 162 HVTSRK 167
Score = 36.6 bits (83), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 55/121 (45%), Gaps = 20/121 (16%)
Query: 241 TAYLSGVKANYGTLGVSGLVTRNDCEAMRNESNHVDTIADWAQDCDKSTGLVTTTRVTHA 300
TA+ +GVK G LGV +E +H TI + A+ +TG V+T + A
Sbjct: 107 TAWSTGVKTYNGALGVD-----------IHEKDH-PTILEMAKAAGLATGNVSTAELQGA 154
Query: 301 TPAALYAHTANREW----ESDKHVLKAKLDPRECEDIASQLITRSPGNKLNVIMGGGRAN 356
TPAAL AH +R+ ++ + L+ I QL+ + +V +GGG
Sbjct: 155 TPAALVAHVTSRKCYGPSKTSQKCPGNALEKGGKGSITEQLLNA----RADVTLGGGAKT 210
Query: 357 F 357
F
Sbjct: 211 F 211
>pdb|1KH4|A Chain A, E. Coli Alkaline Phosphatase Mutant (D330n) In Complex
With Phosphate
pdb|1KH4|B Chain B, E. Coli Alkaline Phosphatase Mutant (D330n) In Complex
With Phosphate
pdb|1KH5|A Chain A, E. Coli Alkaline Phosphatase Mutant (D330n) Mimic Of The
Transition States With Aluminium Fluoride
pdb|1KH5|B Chain B, E. Coli Alkaline Phosphatase Mutant (D330n) Mimic Of The
Transition States With Aluminium Fluoride
pdb|1KH9|A Chain A, E. Coli Alkaline Phosphatase Mutant (D153gd330n) Complex
With Phosphate
pdb|1KH9|B Chain B, E. Coli Alkaline Phosphatase Mutant (D153gd330n) Complex
With Phosphate
Length = 449
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 76/186 (40%), Gaps = 53/186 (28%)
Query: 21 LERKLNEKKARNVILFLGDGMSLATITAARIY-DGQQKGHSGEEAQLSFENFPSTGLSKD 79
L L++K A+N+IL +GDGM + ITAAR Y +G + G K
Sbjct: 33 LRNSLSDKPAKNIILLIGDGMGDSEITAARNYAEG------------------AGGFFKG 74
Query: 80 CDKSTGLVTTTRVTHATPAALYAHTANREWESDKHVLKAKLDPRECEDIACRFRLYSYGL 139
D L T + TH YA + K P D A +S G+
Sbjct: 75 ID---ALPLTGQYTH------YA------------LNKKTGKPDYVTDSAASATAWSTGV 113
Query: 140 -SVRSTLGVSGLVTRNDCEAMRNESNHVDTIADWAQDCDKSTGLVTTTRVTHATPAALYA 198
+ LGV +E +H TI + A+ +TG V+T + ATPAAL A
Sbjct: 114 KTYNGALGVD-----------IHEKDH-PTILEMAKAAGLATGNVSTAELQDATPAALVA 161
Query: 199 HTANRE 204
H +R+
Sbjct: 162 HVTSRK 167
Score = 36.2 bits (82), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 54/121 (44%), Gaps = 20/121 (16%)
Query: 241 TAYLSGVKANYGTLGVSGLVTRNDCEAMRNESNHVDTIADWAQDCDKSTGLVTTTRVTHA 300
TA+ +GVK G LGV +E +H TI + A+ +TG V+T + A
Sbjct: 107 TAWSTGVKTYNGALGVD-----------IHEKDH-PTILEMAKAAGLATGNVSTAELQDA 154
Query: 301 TPAALYAHTANREW----ESDKHVLKAKLDPRECEDIASQLITRSPGNKLNVIMGGGRAN 356
TPAAL AH +R+ + + L+ I QL+ + +V +GGG
Sbjct: 155 TPAALVAHVTSRKCYGPSATSQKCPGNALEKGGKGSITEQLLNA----RADVTLGGGAKT 210
Query: 357 F 357
F
Sbjct: 211 F 211
>pdb|1HJK|A Chain A, Alkaline Phosphatase Mutant H331q
pdb|1HJK|B Chain B, Alkaline Phosphatase Mutant H331q
Length = 449
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 76/185 (41%), Gaps = 51/185 (27%)
Query: 21 LERKLNEKKARNVILFLGDGMSLATITAARIYDGQQKGHSGEEAQLSFENFPSTGLSKDC 80
L L++K A+N+IL +GDGM + ITAAR Y +G + G K
Sbjct: 33 LRDSLSDKPAKNIILLIGDGMGDSEITAARNY---AEG--------------AGGFFKGI 75
Query: 81 DKSTGLVTTTRVTHATPAALYAHTANREWESDKHVLKAKLDPRECEDIACRFRLYSYGL- 139
D L T + TH YA + K P D A +S G+
Sbjct: 76 D---ALPLTGQYTH------YA------------LNKKTGKPDYVTDXAASATAWSTGVK 114
Query: 140 SVRSTLGVSGLVTRNDCEAMRNESNHVDTIADWAQDCDKSTGLVTTTRVTHATPAALYAH 199
+ LGV +E +H TI + A+ +TG V+T + ATPAAL AH
Sbjct: 115 TYNGALGVD-----------IHEKDH-PTILEMAKAAGLATGNVSTAELQDATPAALVAH 162
Query: 200 TANRE 204
+R+
Sbjct: 163 VTSRK 167
Score = 36.2 bits (82), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 38/73 (52%), Gaps = 12/73 (16%)
Query: 241 TAYLSGVKANYGTLGVSGLVTRNDCEAMRNESNHVDTIADWAQDCDKSTGLVTTTRVTHA 300
TA+ +GVK G LGV +E +H TI + A+ +TG V+T + A
Sbjct: 107 TAWSTGVKTYNGALGVD-----------IHEKDH-PTILEMAKAAGLATGNVSTAELQDA 154
Query: 301 TPAALYAHTANRE 313
TPAAL AH +R+
Sbjct: 155 TPAALVAHVTSRK 167
>pdb|1B8J|A Chain A, Alkaline Phosphatase Complexed With Vanadate
pdb|1B8J|B Chain B, Alkaline Phosphatase Complexed With Vanadate
pdb|2GA3|A Chain A, Structure Of S102t E. Coli Alkaline Phosphatase-Phosphate
Intermediate At 2.20a Resolution
pdb|2GA3|B Chain B, Structure Of S102t E. Coli Alkaline Phosphatase-Phosphate
Intermediate At 2.20a Resolution
Length = 449
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 76/185 (41%), Gaps = 51/185 (27%)
Query: 21 LERKLNEKKARNVILFLGDGMSLATITAARIYDGQQKGHSGEEAQLSFENFPSTGLSKDC 80
L L++K A+N+IL +GDGM + ITAAR Y +G + G K
Sbjct: 33 LRDSLSDKPAKNIILLIGDGMGDSEITAARNY---AEG--------------AGGFFKGI 75
Query: 81 DKSTGLVTTTRVTHATPAALYAHTANREWESDKHVLKAKLDPRECEDIACRFRLYSYGL- 139
D L T + TH YA + K P D A +S G+
Sbjct: 76 D---ALPLTGQYTH------YA------------LNKKTGKPDYVTDXAASATAWSTGVK 114
Query: 140 SVRSTLGVSGLVTRNDCEAMRNESNHVDTIADWAQDCDKSTGLVTTTRVTHATPAALYAH 199
+ LGV +E +H TI + A+ +TG V+T + ATPAAL AH
Sbjct: 115 TYNGALGVD-----------IHEKDH-PTILEMAKAAGLATGNVSTAELQDATPAALVAH 162
Query: 200 TANRE 204
+R+
Sbjct: 163 VTSRK 167
Score = 36.2 bits (82), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 38/73 (52%), Gaps = 12/73 (16%)
Query: 241 TAYLSGVKANYGTLGVSGLVTRNDCEAMRNESNHVDTIADWAQDCDKSTGLVTTTRVTHA 300
TA+ +GVK G LGV +E +H TI + A+ +TG V+T + A
Sbjct: 107 TAWSTGVKTYNGALGVD-----------IHEKDH-PTILEMAKAAGLATGNVSTAELQDA 154
Query: 301 TPAALYAHTANRE 313
TPAAL AH +R+
Sbjct: 155 TPAALVAHVTSRK 167
>pdb|1AJD|A Chain A, Three-Dimensional Structure Of The D153g Mutant Of E. Coli
Alkaline Phosphatase: A Mutant With Weaker Magnesium
Binding And Increased Catalytic Activity
pdb|1AJD|B Chain B, Three-Dimensional Structure Of The D153g Mutant Of E. Coli
Alkaline Phosphatase: A Mutant With Weaker Magnesium
Binding And Increased Catalytic Activity
pdb|1AJC|A Chain A, Three-Dimensional Structure Of The D153g Mutant Of E. Coli
Alkaline Phosphatase: A Mutant With Weaker Magnesium
Binding And Increased Catalytic Activity
pdb|1AJC|B Chain B, Three-Dimensional Structure Of The D153g Mutant Of E. Coli
Alkaline Phosphatase: A Mutant With Weaker Magnesium
Binding And Increased Catalytic Activity
pdb|1AJB|A Chain A, Three-Dimensional Structure Of The D153g Mutant Of E. Coli
Alkaline Phosphatase: A Mutant With Weaker Magnesium
Binding And Increased Catalytic Activity
pdb|1AJB|B Chain B, Three-Dimensional Structure Of The D153g Mutant Of E. Coli
Alkaline Phosphatase: A Mutant With Weaker Magnesium
Binding And Increased Catalytic Activity
pdb|1AJA|A Chain A, Three-Dimensional Structure Of The D153g Mutant Of E. Coli
Alkaline Phosphatase: A Mutant With Weaker Magnesium
Binding And Increased Catalytic Activity
pdb|1AJA|B Chain B, Three-Dimensional Structure Of The D153g Mutant Of E. Coli
Alkaline Phosphatase: A Mutant With Weaker Magnesium
Binding And Increased Catalytic Activity
Length = 449
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 76/185 (41%), Gaps = 51/185 (27%)
Query: 21 LERKLNEKKARNVILFLGDGMSLATITAARIYDGQQKGHSGEEAQLSFENFPSTGLSKDC 80
L L++K A+N+IL +GDGM + ITAAR Y +G + G K
Sbjct: 33 LRDSLSDKPAKNIILLIGDGMGDSEITAARNY---AEG--------------AGGFFKGI 75
Query: 81 DKSTGLVTTTRVTHATPAALYAHTANREWESDKHVLKAKLDPRECEDIACRFRLYSYGL- 139
D L T + TH YA + K P D A +S G+
Sbjct: 76 D---ALPLTGQYTH------YA------------LNKKTGKPDYVTDSAASATAWSTGVK 114
Query: 140 SVRSTLGVSGLVTRNDCEAMRNESNHVDTIADWAQDCDKSTGLVTTTRVTHATPAALYAH 199
+ LGV +E +H TI + A+ +TG V+T + ATPAAL AH
Sbjct: 115 TYNGALGVD-----------IHEKDH-PTILEMAKAAGLATGNVSTAELQGATPAALVAH 162
Query: 200 TANRE 204
+R+
Sbjct: 163 VTSRK 167
Score = 36.2 bits (82), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 38/73 (52%), Gaps = 12/73 (16%)
Query: 241 TAYLSGVKANYGTLGVSGLVTRNDCEAMRNESNHVDTIADWAQDCDKSTGLVTTTRVTHA 300
TA+ +GVK G LGV +E +H TI + A+ +TG V+T + A
Sbjct: 107 TAWSTGVKTYNGALGVD-----------IHEKDH-PTILEMAKAAGLATGNVSTAELQGA 154
Query: 301 TPAALYAHTANRE 313
TPAAL AH +R+
Sbjct: 155 TPAALVAHVTSRK 167
>pdb|1ED8|A Chain A, Structure Of E. Coli Alkaline Phosphatase Inhibited By The
Inorganic Phosphate At 1.75a Resolution
pdb|1ED8|B Chain B, Structure Of E. Coli Alkaline Phosphatase Inhibited By The
Inorganic Phosphate At 1.75a Resolution
pdb|1ED9|A Chain A, Structure Of E. Coli Alkaline Phosphatase Without The
Inorganic Phosphate At 1.75a Resolution
pdb|1ED9|B Chain B, Structure Of E. Coli Alkaline Phosphatase Without The
Inorganic Phosphate At 1.75a Resolution
pdb|1EW8|A Chain A, Alkaline Phosphatase (e.c. 3.1.3.1) Complex With
Phosphonoacetic Acid
pdb|1EW8|B Chain B, Alkaline Phosphatase (e.c. 3.1.3.1) Complex With
Phosphonoacetic Acid
pdb|1EW9|A Chain A, Alkaline Phosphatase (E.C. 3.1.3.1) Complex With
Mercaptomethyl Phosphonate
pdb|1EW9|B Chain B, Alkaline Phosphatase (E.C. 3.1.3.1) Complex With
Mercaptomethyl Phosphonate
pdb|1Y6V|A Chain A, Structure Of E. Coli Alkaline Phosphatase In Presence Of
Cobalt At 1.60 A Resolution
pdb|1Y6V|B Chain B, Structure Of E. Coli Alkaline Phosphatase In Presence Of
Cobalt At 1.60 A Resolution
pdb|3TG0|A Chain A, E. Coli Alkaline Phosphatase With Bound Inorganic
Phosphate
pdb|3TG0|B Chain B, E. Coli Alkaline Phosphatase With Bound Inorganic
Phosphate
pdb|3TG0|C Chain C, E. Coli Alkaline Phosphatase With Bound Inorganic
Phosphate
pdb|3TG0|D Chain D, E. Coli Alkaline Phosphatase With Bound Inorganic
Phosphate
Length = 449
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 76/185 (41%), Gaps = 51/185 (27%)
Query: 21 LERKLNEKKARNVILFLGDGMSLATITAARIYDGQQKGHSGEEAQLSFENFPSTGLSKDC 80
L L++K A+N+IL +GDGM + ITAAR Y +G + G K
Sbjct: 33 LRDSLSDKPAKNIILLIGDGMGDSEITAARNY---AEG--------------AGGFFKGI 75
Query: 81 DKSTGLVTTTRVTHATPAALYAHTANREWESDKHVLKAKLDPRECEDIACRFRLYSYGL- 139
D L T + TH YA + K P D A +S G+
Sbjct: 76 D---ALPLTGQYTH------YA------------LNKKTGKPDYVTDSAASATAWSTGVK 114
Query: 140 SVRSTLGVSGLVTRNDCEAMRNESNHVDTIADWAQDCDKSTGLVTTTRVTHATPAALYAH 199
+ LGV +E +H TI + A+ +TG V+T + ATPAAL AH
Sbjct: 115 TYNGALGVD-----------IHEKDH-PTILEMAKAAGLATGNVSTAELQDATPAALVAH 162
Query: 200 TANRE 204
+R+
Sbjct: 163 VTSRK 167
Score = 36.2 bits (82), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 38/73 (52%), Gaps = 12/73 (16%)
Query: 241 TAYLSGVKANYGTLGVSGLVTRNDCEAMRNESNHVDTIADWAQDCDKSTGLVTTTRVTHA 300
TA+ +GVK G LGV +E +H TI + A+ +TG V+T + A
Sbjct: 107 TAWSTGVKTYNGALGVD-----------IHEKDH-PTILEMAKAAGLATGNVSTAELQDA 154
Query: 301 TPAALYAHTANRE 313
TPAAL AH +R+
Sbjct: 155 TPAALVAHVTSRK 167
>pdb|3DYC|A Chain A, Structure Of E322y Alkaline Phosphatase In Complex With
Inorganic Phosphate
pdb|3DYC|B Chain B, Structure Of E322y Alkaline Phosphatase In Complex With
Inorganic Phosphate
Length = 449
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 75/185 (40%), Gaps = 51/185 (27%)
Query: 21 LERKLNEKKARNVILFLGDGMSLATITAARIYDGQQKGHSGEEAQLSFENFPSTGLSKDC 80
L L++K A+N+IL +GDGM + ITAAR Y E A G K
Sbjct: 33 LRDSLSDKPAKNIILLIGDGMGDSEITAARNY--------AEGA---------GGFFKGI 75
Query: 81 DKSTGLVTTTRVTHATPAALYAHTANREWESDKHVLKAKLDPRECEDIACRFRLYSYGL- 139
D L T + TH YA + K P D A +S G+
Sbjct: 76 D---ALPLTGQYTH------YA------------LNKKTGKPDYVTDSAASATAWSTGVK 114
Query: 140 SVRSTLGVSGLVTRNDCEAMRNESNHVDTIADWAQDCDKSTGLVTTTRVTHATPAALYAH 199
+ LGV +E +H TI + A+ +TG V+T + ATPAAL AH
Sbjct: 115 TYNGALGVD-----------IHEKDH-PTILEMAKAAGLATGNVSTAELQDATPAALVAH 162
Query: 200 TANRE 204
+R+
Sbjct: 163 VTSRK 167
Score = 36.2 bits (82), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 38/73 (52%), Gaps = 12/73 (16%)
Query: 241 TAYLSGVKANYGTLGVSGLVTRNDCEAMRNESNHVDTIADWAQDCDKSTGLVTTTRVTHA 300
TA+ +GVK G LGV +E +H TI + A+ +TG V+T + A
Sbjct: 107 TAWSTGVKTYNGALGVD-----------IHEKDH-PTILEMAKAAGLATGNVSTAELQDA 154
Query: 301 TPAALYAHTANRE 313
TPAAL AH +R+
Sbjct: 155 TPAALVAHVTSRK 167
>pdb|1ALH|A Chain A, Kinetics And Crystal Structure Of A Mutant E. Coli
Alkaline Phosphatase (Asp-369-->asn): A Mechanism
Involving One Zinc Per Active Site
pdb|1ALH|B Chain B, Kinetics And Crystal Structure Of A Mutant E. Coli
Alkaline Phosphatase (Asp-369-->asn): A Mechanism
Involving One Zinc Per Active Site
Length = 446
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 76/185 (41%), Gaps = 51/185 (27%)
Query: 21 LERKLNEKKARNVILFLGDGMSLATITAARIYDGQQKGHSGEEAQLSFENFPSTGLSKDC 80
L L++K A+N+IL +GDGM + ITAAR Y +G + G K
Sbjct: 30 LRDSLSDKPAKNIILLIGDGMGDSEITAARNY---AEG--------------AGGFFKGI 72
Query: 81 DKSTGLVTTTRVTHATPAALYAHTANREWESDKHVLKAKLDPRECEDIACRFRLYSYGL- 139
D L T + TH YA + K P D A +S G+
Sbjct: 73 D---ALPLTGQYTH------YA------------LNKKTGKPDYVTDSAASATAWSTGVK 111
Query: 140 SVRSTLGVSGLVTRNDCEAMRNESNHVDTIADWAQDCDKSTGLVTTTRVTHATPAALYAH 199
+ LGV +E +H TI + A+ +TG V+T + ATPAAL AH
Sbjct: 112 TYNGALGVD-----------IHEKDH-PTILEMAKAAGLATGNVSTAELQDATPAALVAH 159
Query: 200 TANRE 204
+R+
Sbjct: 160 VTSRK 164
Score = 36.2 bits (82), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 38/73 (52%), Gaps = 12/73 (16%)
Query: 241 TAYLSGVKANYGTLGVSGLVTRNDCEAMRNESNHVDTIADWAQDCDKSTGLVTTTRVTHA 300
TA+ +GVK G LGV +E +H TI + A+ +TG V+T + A
Sbjct: 104 TAWSTGVKTYNGALGVD-----------IHEKDH-PTILEMAKAAGLATGNVSTAELQDA 151
Query: 301 TPAALYAHTANRE 313
TPAAL AH +R+
Sbjct: 152 TPAALVAHVTSRK 164
>pdb|1HQA|A Chain A, Alkaline Phosphatase (H412q)
pdb|1HQA|B Chain B, Alkaline Phosphatase (H412q)
Length = 449
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 76/185 (41%), Gaps = 51/185 (27%)
Query: 21 LERKLNEKKARNVILFLGDGMSLATITAARIYDGQQKGHSGEEAQLSFENFPSTGLSKDC 80
L L++K A+N+IL +GDGM + ITAAR Y +G + G K
Sbjct: 33 LRDSLSDKPAKNIILLIGDGMGDSEITAARNY---AEG--------------AGGFFKGI 75
Query: 81 DKSTGLVTTTRVTHATPAALYAHTANREWESDKHVLKAKLDPRECEDIACRFRLYSYGL- 139
D L T + TH YA + K P D A +S G+
Sbjct: 76 D---ALPLTGQYTH------YA------------LNKKTGKPDYVTDSAASATAWSTGVK 114
Query: 140 SVRSTLGVSGLVTRNDCEAMRNESNHVDTIADWAQDCDKSTGLVTTTRVTHATPAALYAH 199
+ LGV +E +H TI + A+ +TG V+T + ATPAAL AH
Sbjct: 115 TYNGALGVD-----------IHEKDH-PTILEMAKAAGLATGNVSTAELQDATPAALVAH 162
Query: 200 TANRE 204
+R+
Sbjct: 163 VTSRK 167
Score = 36.2 bits (82), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 38/73 (52%), Gaps = 12/73 (16%)
Query: 241 TAYLSGVKANYGTLGVSGLVTRNDCEAMRNESNHVDTIADWAQDCDKSTGLVTTTRVTHA 300
TA+ +GVK G LGV +E +H TI + A+ +TG V+T + A
Sbjct: 107 TAWSTGVKTYNGALGVD-----------IHEKDH-PTILEMAKAAGLATGNVSTAELQDA 154
Query: 301 TPAALYAHTANRE 313
TPAAL AH +R+
Sbjct: 155 TPAALVAHVTSRK 167
>pdb|3BDG|B Chain B, Crystal Structure Of Wild-TypeT155V MIXED DIMER OF E. COLI
ALKALINE Phosphatase
Length = 458
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 76/185 (41%), Gaps = 51/185 (27%)
Query: 21 LERKLNEKKARNVILFLGDGMSLATITAARIYDGQQKGHSGEEAQLSFENFPSTGLSKDC 80
L L++K A+N+IL +GDGM + ITAAR Y +G + G K
Sbjct: 34 LRDSLSDKPAKNIILLIGDGMGDSEITAARNY---AEG--------------AGGFFKGI 76
Query: 81 DKSTGLVTTTRVTHATPAALYAHTANREWESDKHVLKAKLDPRECEDIACRFRLYSYGL- 139
D L T + TH YA + K P D A +S G+
Sbjct: 77 D---ALPLTGQYTH------YA------------LNKKTGKPDYVTDSAASATAWSTGVK 115
Query: 140 SVRSTLGVSGLVTRNDCEAMRNESNHVDTIADWAQDCDKSTGLVTTTRVTHATPAALYAH 199
+ LGV +E +H TI + A+ +TG V+T + ATPAAL AH
Sbjct: 116 TYNGALGVD-----------IHEKDH-PTILEMAKAAGLATGNVSTAELQDATPAALVAH 163
Query: 200 TANRE 204
+R+
Sbjct: 164 VTSRK 168
Score = 36.2 bits (82), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 38/73 (52%), Gaps = 12/73 (16%)
Query: 241 TAYLSGVKANYGTLGVSGLVTRNDCEAMRNESNHVDTIADWAQDCDKSTGLVTTTRVTHA 300
TA+ +GVK G LGV +E +H TI + A+ +TG V+T + A
Sbjct: 108 TAWSTGVKTYNGALGVD-----------IHEKDH-PTILEMAKAAGLATGNVSTAELQDA 155
Query: 301 TPAALYAHTANRE 313
TPAAL AH +R+
Sbjct: 156 TPAALVAHVTSRK 168
>pdb|1ALJ|A Chain A, Alkaline Phosphatase Mutant (H412n)
pdb|1ALJ|B Chain B, Alkaline Phosphatase Mutant (H412n)
pdb|1ALI|A Chain A, Alkaline Phosphatase Mutant (H412n)
pdb|1ALI|B Chain B, Alkaline Phosphatase Mutant (H412n)
Length = 449
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 76/185 (41%), Gaps = 51/185 (27%)
Query: 21 LERKLNEKKARNVILFLGDGMSLATITAARIYDGQQKGHSGEEAQLSFENFPSTGLSKDC 80
L L++K A+N+IL +GDGM + ITAAR Y +G + G K
Sbjct: 33 LRDSLSDKPAKNIILLIGDGMGDSEITAARNY---AEG--------------AGGFFKGI 75
Query: 81 DKSTGLVTTTRVTHATPAALYAHTANREWESDKHVLKAKLDPRECEDIACRFRLYSYGL- 139
D L T + TH YA + K P D A +S G+
Sbjct: 76 D---ALPLTGQYTH------YA------------LNKKTGKPDYVTDSAASATAWSTGVK 114
Query: 140 SVRSTLGVSGLVTRNDCEAMRNESNHVDTIADWAQDCDKSTGLVTTTRVTHATPAALYAH 199
+ LGV +E +H TI + A+ +TG V+T + ATPAAL AH
Sbjct: 115 TYNGALGVD-----------IHEKDH-PTILEMAKAAGLATGNVSTAELQDATPAALVAH 162
Query: 200 TANRE 204
+R+
Sbjct: 163 VTSRK 167
Score = 36.2 bits (82), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 38/73 (52%), Gaps = 12/73 (16%)
Query: 241 TAYLSGVKANYGTLGVSGLVTRNDCEAMRNESNHVDTIADWAQDCDKSTGLVTTTRVTHA 300
TA+ +GVK G LGV +E +H TI + A+ +TG V+T + A
Sbjct: 107 TAWSTGVKTYNGALGVD-----------IHEKDH-PTILEMAKAAGLATGNVSTAELQDA 154
Query: 301 TPAALYAHTANRE 313
TPAAL AH +R+
Sbjct: 155 TPAALVAHVTSRK 167
>pdb|1ANJ|A Chain A, Alkaline Phosphatase (K328h)
pdb|1ANJ|B Chain B, Alkaline Phosphatase (K328h)
Length = 446
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 76/185 (41%), Gaps = 51/185 (27%)
Query: 21 LERKLNEKKARNVILFLGDGMSLATITAARIYDGQQKGHSGEEAQLSFENFPSTGLSKDC 80
L L++K A+N+IL +GDGM + ITAAR Y +G + G K
Sbjct: 30 LRDSLSDKPAKNIILLIGDGMGDSEITAARNY---AEG--------------AGGFFKGI 72
Query: 81 DKSTGLVTTTRVTHATPAALYAHTANREWESDKHVLKAKLDPRECEDIACRFRLYSYGL- 139
D L T + TH YA + K P D A +S G+
Sbjct: 73 D---ALPLTGQYTH------YA------------LNKKTGKPDYVTDSAASATAWSTGVK 111
Query: 140 SVRSTLGVSGLVTRNDCEAMRNESNHVDTIADWAQDCDKSTGLVTTTRVTHATPAALYAH 199
+ LGV +E +H TI + A+ +TG V+T + ATPAAL AH
Sbjct: 112 TYNGALGVD-----------IHEKDH-PTILEMAKAAGLATGNVSTAELQDATPAALVAH 159
Query: 200 TANRE 204
+R+
Sbjct: 160 VTSRK 164
Score = 36.2 bits (82), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 38/73 (52%), Gaps = 12/73 (16%)
Query: 241 TAYLSGVKANYGTLGVSGLVTRNDCEAMRNESNHVDTIADWAQDCDKSTGLVTTTRVTHA 300
TA+ +GVK G LGV +E +H TI + A+ +TG V+T + A
Sbjct: 104 TAWSTGVKTYNGALGVD-----------IHEKDH-PTILEMAKAAGLATGNVSTAELQDA 151
Query: 301 TPAALYAHTANRE 313
TPAAL AH +R+
Sbjct: 152 TPAALVAHVTSRK 164
>pdb|3BDH|A Chain A, Crystal Structure Of Zinc-Deficient Wild-Type E. Coli
Alkaline Phosphatase
pdb|3BDH|B Chain B, Crystal Structure Of Zinc-Deficient Wild-Type E. Coli
Alkaline Phosphatase
Length = 458
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 76/185 (41%), Gaps = 51/185 (27%)
Query: 21 LERKLNEKKARNVILFLGDGMSLATITAARIYDGQQKGHSGEEAQLSFENFPSTGLSKDC 80
L L++K A+N+IL +GDGM + ITAAR Y +G + G K
Sbjct: 34 LRDSLSDKPAKNIILLIGDGMGDSEITAARNY---AEG--------------AGGFFKGI 76
Query: 81 DKSTGLVTTTRVTHATPAALYAHTANREWESDKHVLKAKLDPRECEDIACRFRLYSYGL- 139
D L T + TH YA + K P D A +S G+
Sbjct: 77 D---ALPLTGQYTH------YA------------LNKKTGKPDYVTDSAASATAWSTGVK 115
Query: 140 SVRSTLGVSGLVTRNDCEAMRNESNHVDTIADWAQDCDKSTGLVTTTRVTHATPAALYAH 199
+ LGV +E +H TI + A+ +TG V+T + ATPAAL AH
Sbjct: 116 TYNGALGVD-----------IHEKDH-PTILEMAKAAGLATGNVSTAELQDATPAALVAH 163
Query: 200 TANRE 204
+R+
Sbjct: 164 VTSRK 168
Score = 36.2 bits (82), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 38/73 (52%), Gaps = 12/73 (16%)
Query: 241 TAYLSGVKANYGTLGVSGLVTRNDCEAMRNESNHVDTIADWAQDCDKSTGLVTTTRVTHA 300
TA+ +GVK G LGV +E +H TI + A+ +TG V+T + A
Sbjct: 108 TAWSTGVKTYNGALGVD-----------IHEKDH-PTILEMAKAAGLATGNVSTAELQDA 155
Query: 301 TPAALYAHTANRE 313
TPAAL AH +R+
Sbjct: 156 TPAALVAHVTSRK 168
>pdb|1ELZ|A Chain A, E. Coli Alkaline Phosphatase Mutant (S102g)
pdb|1ELZ|B Chain B, E. Coli Alkaline Phosphatase Mutant (S102g)
Length = 449
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 76/185 (41%), Gaps = 51/185 (27%)
Query: 21 LERKLNEKKARNVILFLGDGMSLATITAARIYDGQQKGHSGEEAQLSFENFPSTGLSKDC 80
L L++K A+N+IL +GDGM + ITAAR Y +G + G K
Sbjct: 33 LRDSLSDKPAKNIILLIGDGMGDSEITAARNY---AEG--------------AGGFFKGI 75
Query: 81 DKSTGLVTTTRVTHATPAALYAHTANREWESDKHVLKAKLDPRECEDIACRFRLYSYGL- 139
D L T + TH YA + K P D A +S G+
Sbjct: 76 D---ALPLTGQYTH------YA------------LNKKTGKPDYVTDGAASATAWSTGVK 114
Query: 140 SVRSTLGVSGLVTRNDCEAMRNESNHVDTIADWAQDCDKSTGLVTTTRVTHATPAALYAH 199
+ LGV +E +H TI + A+ +TG V+T + ATPAAL AH
Sbjct: 115 TYNGALGVD-----------IHEKDH-PTILEMAKAAGLATGNVSTAELQDATPAALVAH 162
Query: 200 TANRE 204
+R+
Sbjct: 163 VTSRK 167
Score = 36.2 bits (82), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 38/73 (52%), Gaps = 12/73 (16%)
Query: 241 TAYLSGVKANYGTLGVSGLVTRNDCEAMRNESNHVDTIADWAQDCDKSTGLVTTTRVTHA 300
TA+ +GVK G LGV +E +H TI + A+ +TG V+T + A
Sbjct: 107 TAWSTGVKTYNGALGVD-----------IHEKDH-PTILEMAKAAGLATGNVSTAELQDA 154
Query: 301 TPAALYAHTANRE 313
TPAAL AH +R+
Sbjct: 155 TPAALVAHVTSRK 167
>pdb|3BDF|A Chain A, Crystal Structure Of Metal-Free E. Coli Alkaline
Phosphatase (T155v)
pdb|3BDF|B Chain B, Crystal Structure Of Metal-Free E. Coli Alkaline
Phosphatase (T155v)
pdb|3BDG|A Chain A, Crystal Structure Of Wild-TypeT155V MIXED DIMER OF E. COLI
ALKALINE Phosphatase
Length = 458
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 75/185 (40%), Gaps = 51/185 (27%)
Query: 21 LERKLNEKKARNVILFLGDGMSLATITAARIYDGQQKGHSGEEAQLSFENFPSTGLSKDC 80
L L++K A+N+IL +GDGM + ITAAR Y +G + G K
Sbjct: 34 LRDSLSDKPAKNIILLIGDGMGDSEITAARNY---AEG--------------AGGFFKGI 76
Query: 81 DKSTGLVTTTRVTHATPAALYAHTANREWESDKHVLKAKLDPRECEDIACRFRLYSYGL- 139
D L T + TH YA + K P D A +S G+
Sbjct: 77 D---ALPLTGQYTH------YA------------LNKKTGKPDYVTDSAASATAWSTGVK 115
Query: 140 SVRSTLGVSGLVTRNDCEAMRNESNHVDTIADWAQDCDKSTGLVTTTRVTHATPAALYAH 199
+ LGV +E +H TI + A+ +TG V+T + A PAAL AH
Sbjct: 116 TYNGALGVD-----------IHEKDH-PTILEMAKAAGLATGNVSTAELQDAVPAALVAH 163
Query: 200 TANRE 204
+R+
Sbjct: 164 VTSRK 168
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 37/73 (50%), Gaps = 12/73 (16%)
Query: 241 TAYLSGVKANYGTLGVSGLVTRNDCEAMRNESNHVDTIADWAQDCDKSTGLVTTTRVTHA 300
TA+ +GVK G LGV +E +H TI + A+ +TG V+T + A
Sbjct: 108 TAWSTGVKTYNGALGVD-----------IHEKDH-PTILEMAKAAGLATGNVSTAELQDA 155
Query: 301 TPAALYAHTANRE 313
PAAL AH +R+
Sbjct: 156 VPAALVAHVTSRK 168
>pdb|1URB|A Chain A, Alkaline Phosphatase (N51mg)
pdb|1URB|B Chain B, Alkaline Phosphatase (N51mg)
pdb|1URA|A Chain A, Alkaline Phosphatase (D51zn)
pdb|1URA|B Chain B, Alkaline Phosphatase (D51zn)
Length = 446
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 76/185 (41%), Gaps = 51/185 (27%)
Query: 21 LERKLNEKKARNVILFLGDGMSLATITAARIYDGQQKGHSGEEAQLSFENFPSTGLSKDC 80
L L++K A+N+IL +G+GM + ITAAR Y +G + G K
Sbjct: 30 LRDSLSDKPAKNIILLIGNGMGDSEITAARNY---AEG--------------AGGFFKGI 72
Query: 81 DKSTGLVTTTRVTHATPAALYAHTANREWESDKHVLKAKLDPRECEDIACRFRLYSYGL- 139
D L T + TH YA + K P D A +S G+
Sbjct: 73 D---ALPLTGQYTH------YA------------LNKKTGKPDYVTDSAASATAWSTGVK 111
Query: 140 SVRSTLGVSGLVTRNDCEAMRNESNHVDTIADWAQDCDKSTGLVTTTRVTHATPAALYAH 199
+ LGV +E +H TI + A+ +TG V+T + ATPAAL AH
Sbjct: 112 TYNGALGVD-----------IHEKDH-PTILEMAKAAGLATGNVSTAELQDATPAALVAH 159
Query: 200 TANRE 204
+R+
Sbjct: 160 VTSRK 164
Score = 36.2 bits (82), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 38/73 (52%), Gaps = 12/73 (16%)
Query: 241 TAYLSGVKANYGTLGVSGLVTRNDCEAMRNESNHVDTIADWAQDCDKSTGLVTTTRVTHA 300
TA+ +GVK G LGV +E +H TI + A+ +TG V+T + A
Sbjct: 104 TAWSTGVKTYNGALGVD-----------IHEKDH-PTILEMAKAAGLATGNVSTAELQDA 151
Query: 301 TPAALYAHTANRE 313
TPAAL AH +R+
Sbjct: 152 TPAALVAHVTSRK 164
>pdb|3CMR|A Chain A, E. Coli Alkaline Phosphatase Mutant R166s In Complex With
Phosphate
pdb|3CMR|B Chain B, E. Coli Alkaline Phosphatase Mutant R166s In Complex With
Phosphate
Length = 449
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 73/180 (40%), Gaps = 51/180 (28%)
Query: 21 LERKLNEKKARNVILFLGDGMSLATITAARIYDGQQKGHSGEEAQLSFENFPSTGLSKDC 80
L L++K A+N+IL +GDGM + ITAAR Y +G + G K
Sbjct: 33 LRDSLSDKPAKNIILLIGDGMGDSEITAARNY---AEG--------------AGGFFKGI 75
Query: 81 DKSTGLVTTTRVTHATPAALYAHTANREWESDKHVLKAKLDPRECEDIACRFRLYSYGL- 139
D L T + TH YA + K P D A +S G+
Sbjct: 76 D---ALPLTGQYTH------YA------------LNKKTGKPDYVTDSAASATAWSTGVK 114
Query: 140 SVRSTLGVSGLVTRNDCEAMRNESNHVDTIADWAQDCDKSTGLVTTTRVTHATPAALYAH 199
+ LGV +E +H TI + A+ +TG V+T + ATPAAL AH
Sbjct: 115 TYNGALGVD-----------IHEKDH-PTILEMAKAAGLATGNVSTAELQDATPAALVAH 162
Score = 33.9 bits (76), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 35/68 (51%), Gaps = 12/68 (17%)
Query: 241 TAYLSGVKANYGTLGVSGLVTRNDCEAMRNESNHVDTIADWAQDCDKSTGLVTTTRVTHA 300
TA+ +GVK G LGV +E +H TI + A+ +TG V+T + A
Sbjct: 107 TAWSTGVKTYNGALGVD-----------IHEKDH-PTILEMAKAAGLATGNVSTAELQDA 154
Query: 301 TPAALYAH 308
TPAAL AH
Sbjct: 155 TPAALVAH 162
>pdb|3A52|A Chain A, Crystal Structure Of Cold-Active Alkailne Phosphatase From
Psychrophile Shewanella Sp.
pdb|3A52|B Chain B, Crystal Structure Of Cold-Active Alkailne Phosphatase From
Psychrophile Shewanella Sp
Length = 400
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 43/100 (43%), Gaps = 19/100 (19%)
Query: 258 GLVTRNDCEAMRNESNHVDTIADWAQDCDKSTGLVTTTRVTHATPAALYAHTANREWESD 317
G + N A+ + TI A+ STG+ T +V HATPAA H +R
Sbjct: 68 GFKSYNGAIAVDINKRPLTTIMQMAKARGMSTGVAVTAQVNHATPAAFLTHNESR----- 122
Query: 318 KHVLKAKLDPRECEDIASQLITRSPGNKLNVIMGGGRANF 357
+ E IA+ ++ + +VI+GGGR F
Sbjct: 123 ----------KNYEAIAADMLK----SDADVILGGGRKYF 148
Score = 34.3 bits (77), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 27/56 (48%)
Query: 149 GLVTRNDCEAMRNESNHVDTIADWAQDCDKSTGLVTTTRVTHATPAALYAHTANRE 204
G + N A+ + TI A+ STG+ T +V HATPAA H +R+
Sbjct: 68 GFKSYNGAIAVDINKRPLTTIMQMAKARGMSTGVAVTAQVNHATPAAFLTHNESRK 123
Score = 32.0 bits (71), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 20/33 (60%)
Query: 76 LSKDCDKSTGLVTTTRVTHATPAALYAHTANRE 108
++K STG+ T +V HATPAA H +R+
Sbjct: 91 MAKARGMSTGVAVTAQVNHATPAAFLTHNESRK 123
>pdb|1ELX|A Chain A, E. Coli Alkaline Phosphatase Mutant (S102a)
pdb|1ELX|B Chain B, E. Coli Alkaline Phosphatase Mutant (S102a)
Length = 449
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 23/32 (71%)
Query: 21 LERKLNEKKARNVILFLGDGMSLATITAARIY 52
L L++K A+N+IL +GDGM + ITAAR Y
Sbjct: 33 LRDSLSDKPAKNIILLIGDGMGDSEITAARNY 64
Score = 33.1 bits (74), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 34/68 (50%), Gaps = 12/68 (17%)
Query: 246 GVKANYGTLGVSGLVTRNDCEAMRNESNHVDTIADWAQDCDKSTGLVTTTRVTHATPAAL 305
GVK G LGV +E +H TI + A+ +TG V+T + ATPAAL
Sbjct: 112 GVKTYNGALGVD-----------IHEKDH-PTILEMAKAAGLATGNVSTAELQDATPAAL 159
Query: 306 YAHTANRE 313
AH +R+
Sbjct: 160 VAHVTSRK 167
Score = 31.6 bits (70), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Query: 161 NESNHVDTIADWAQDCDKSTGLVTTTRVTHATPAALYAHTANRE 204
+E +H TI + A+ +TG V+T + ATPAAL AH +R+
Sbjct: 125 HEKDH-PTILEMAKAAGLATGNVSTAELQDATPAALVAHVTSRK 167
Score = 29.3 bits (64), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 21/33 (63%)
Query: 76 LSKDCDKSTGLVTTTRVTHATPAALYAHTANRE 108
++K +TG V+T + ATPAAL AH +R+
Sbjct: 135 MAKAAGLATGNVSTAELQDATPAALVAHVTSRK 167
>pdb|1NJ1|A Chain A, Crystal Structure Of Prolyl-Trna Synthetase From
Methanothermobacter Thermautotrophicus Bound To Cysteine
Sulfamoyl Adenylate
pdb|1NJ2|A Chain A, Crystal Structure Of Prolyl-Trna Synthetase From
Methanothermobacter Thermautotrophicus
pdb|1NJ5|A Chain A, Crystal Structure Of Prolyl-trna Synthetase From
Methanothermobacter Thermautotrophicus Bound To Proline
Sulfamoyl Adenylate
pdb|1NJ6|A Chain A, Crystal Structure Of Prolyl-Trna Synthetase From
Methanothermobacter Thermautotrophicus Bound To Alanine
Sulfamoyl Adenylate
Length = 501
Score = 30.4 bits (67), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 45/93 (48%), Gaps = 7/93 (7%)
Query: 204 EWESDKHVLKAKLDPRECEDIASQLITRSPGNKLNVTTAYLSGVKANYGTLG---VSGLV 260
EWE L+ ++ PR+ E A+ + R G K+ TA L G++ L + L
Sbjct: 364 EWEMRGVPLRVEIGPRDLEKGAAVISRRDTGEKV---TADLQGIEETLRELMKDILENLR 420
Query: 261 TRNDCEAMRNESNHVDTIADWAQDCDKSTGLVT 293
TR E M +E +T+ + ++ D+ G+++
Sbjct: 421 TRA-WERMESEIREAETLEEASRIVDEKRGIIS 452
>pdb|3L65|A Chain A, Xenobiotic Reductase A - C25a Mutant
pdb|3L66|A Chain A, Xenobiotic Reductase A - C25a Variant With Coumarin
Length = 363
Score = 29.3 bits (64), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 25/53 (47%), Gaps = 6/53 (11%)
Query: 178 KSTGLVTTTRVTHATPAALYAHTANREWESDKHVLKAKLDPRECEDIASQLIT 230
K+ G V ++ HA A +ANR WE D H+ A D R E IA I
Sbjct: 90 KAAGSVPGIQIAHAGRKA----SANRPWEGDDHI--AADDTRGWETIAPSAIA 136
Score = 29.3 bits (64), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 25/53 (47%), Gaps = 6/53 (11%)
Query: 287 KSTGLVTTTRVTHATPAALYAHTANREWESDKHVLKAKLDPRECEDIASQLIT 339
K+ G V ++ HA A +ANR WE D H+ A D R E IA I
Sbjct: 90 KAAGSVPGIQIAHAGRKA----SANRPWEGDDHI--AADDTRGWETIAPSAIA 136
>pdb|3L67|A Chain A, Xenobiotic Reductase A - C25s Variant
pdb|3L68|A Chain A, Xenobiotic Reductase A - C25s Variant With Coumarin
Length = 363
Score = 29.3 bits (64), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 25/53 (47%), Gaps = 6/53 (11%)
Query: 178 KSTGLVTTTRVTHATPAALYAHTANREWESDKHVLKAKLDPRECEDIASQLIT 230
K+ G V ++ HA A +ANR WE D H+ A D R E IA I
Sbjct: 90 KAAGSVPGIQIAHAGRKA----SANRPWEGDDHI--AADDTRGWETIAPSAIA 136
Score = 29.3 bits (64), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 25/53 (47%), Gaps = 6/53 (11%)
Query: 287 KSTGLVTTTRVTHATPAALYAHTANREWESDKHVLKAKLDPRECEDIASQLIT 339
K+ G V ++ HA A +ANR WE D H+ A D R E IA I
Sbjct: 90 KAAGSVPGIQIAHAGRKA----SANRPWEGDDHI--AADDTRGWETIAPSAIA 136
>pdb|2H8Z|A Chain A, Xenobiotic Reductase A In Complex With 8-Hydroxycoumarin
pdb|2H90|A Chain A, Xenobiotic Reductase A In Complex With Coumarin
Length = 359
Score = 29.3 bits (64), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 25/53 (47%), Gaps = 6/53 (11%)
Query: 178 KSTGLVTTTRVTHATPAALYAHTANREWESDKHVLKAKLDPRECEDIASQLIT 230
K+ G V ++ HA A +ANR WE D H+ A D R E IA I
Sbjct: 89 KAAGSVPGIQIAHAGRKA----SANRPWEGDDHI--AADDTRGWETIAPSAIA 135
Score = 29.3 bits (64), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 25/53 (47%), Gaps = 6/53 (11%)
Query: 287 KSTGLVTTTRVTHATPAALYAHTANREWESDKHVLKAKLDPRECEDIASQLIT 339
K+ G V ++ HA A +ANR WE D H+ A D R E IA I
Sbjct: 89 KAAGSVPGIQIAHAGRKA----SANRPWEGDDHI--AADDTRGWETIAPSAIA 135
>pdb|3N14|A Chain A, Xena - W358a
Length = 363
Score = 29.3 bits (64), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 25/53 (47%), Gaps = 6/53 (11%)
Query: 178 KSTGLVTTTRVTHATPAALYAHTANREWESDKHVLKAKLDPRECEDIASQLIT 230
K+ G V ++ HA A +ANR WE D H+ A D R E IA I
Sbjct: 90 KAAGSVPGIQIAHAGRKA----SANRPWEGDDHI--AADDTRGWETIAPSAIA 136
Score = 29.3 bits (64), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 25/53 (47%), Gaps = 6/53 (11%)
Query: 287 KSTGLVTTTRVTHATPAALYAHTANREWESDKHVLKAKLDPRECEDIASQLIT 339
K+ G V ++ HA A +ANR WE D H+ A D R E IA I
Sbjct: 90 KAAGSVPGIQIAHAGRKA----SANRPWEGDDHI--AADDTRGWETIAPSAIA 136
>pdb|3L5L|A Chain A, Xenobiotic Reductase A - Oxidized
pdb|3L5M|A Chain A, Xenobiotic Reductase A - Coumarin Bound
pdb|3N19|B Chain B, Xena - Reduced
pdb|3N19|D Chain D, Xena - Reduced
Length = 363
Score = 29.3 bits (64), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 25/53 (47%), Gaps = 6/53 (11%)
Query: 178 KSTGLVTTTRVTHATPAALYAHTANREWESDKHVLKAKLDPRECEDIASQLIT 230
K+ G V ++ HA A +ANR WE D H+ A D R E IA I
Sbjct: 90 KAAGSVPGIQIAHAGRKA----SANRPWEGDDHI--AADDTRGWETIAPSAIA 136
Score = 29.3 bits (64), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 25/53 (47%), Gaps = 6/53 (11%)
Query: 287 KSTGLVTTTRVTHATPAALYAHTANREWESDKHVLKAKLDPRECEDIASQLIT 339
K+ G V ++ HA A +ANR WE D H+ A D R E IA I
Sbjct: 90 KAAGSVPGIQIAHAGRKA----SANRPWEGDDHI--AADDTRGWETIAPSAIA 136
>pdb|3N16|A Chain A, Xena - Y183f
Length = 363
Score = 29.3 bits (64), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 25/53 (47%), Gaps = 6/53 (11%)
Query: 178 KSTGLVTTTRVTHATPAALYAHTANREWESDKHVLKAKLDPRECEDIASQLIT 230
K+ G V ++ HA A +ANR WE D H+ A D R E IA I
Sbjct: 90 KAAGSVPGIQIAHAGRKA----SANRPWEGDDHI--AADDTRGWETIAPSAIA 136
Score = 29.3 bits (64), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 25/53 (47%), Gaps = 6/53 (11%)
Query: 287 KSTGLVTTTRVTHATPAALYAHTANREWESDKHVLKAKLDPRECEDIASQLIT 339
K+ G V ++ HA A +ANR WE D H+ A D R E IA I
Sbjct: 90 KAAGSVPGIQIAHAGRKA----SANRPWEGDDHI--AADDTRGWETIAPSAIA 136
>pdb|2H8X|A Chain A, Xenobiotic Reductase A-Oxidized
Length = 358
Score = 29.3 bits (64), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 25/53 (47%), Gaps = 6/53 (11%)
Query: 178 KSTGLVTTTRVTHATPAALYAHTANREWESDKHVLKAKLDPRECEDIASQLIT 230
K+ G V ++ HA A +ANR WE D H+ A D R E IA I
Sbjct: 88 KAAGSVPGIQIAHAGRKA----SANRPWEGDDHI--AADDTRGWETIAPSAIA 134
Score = 29.3 bits (64), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 25/53 (47%), Gaps = 6/53 (11%)
Query: 287 KSTGLVTTTRVTHATPAALYAHTANREWESDKHVLKAKLDPRECEDIASQLIT 339
K+ G V ++ HA A +ANR WE D H+ A D R E IA I
Sbjct: 88 KAAGSVPGIQIAHAGRKA----SANRPWEGDDHI--AADDTRGWETIAPSAIA 134
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.315 0.129 0.384
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,656,766
Number of Sequences: 62578
Number of extensions: 508761
Number of successful extensions: 1569
Number of sequences better than 100.0: 53
Number of HSP's better than 100.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 1369
Number of HSP's gapped (non-prelim): 184
length of query: 414
length of database: 14,973,337
effective HSP length: 101
effective length of query: 313
effective length of database: 8,652,959
effective search space: 2708376167
effective search space used: 2708376167
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 53 (25.0 bits)