Query psy2457
Match_columns 189
No_of_seqs 126 out of 2135
Neff 9.8
Searched_HMMs 29240
Date Fri Aug 16 16:47:52 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy2457.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/2457hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2vj3_A Neurogenic locus notch 99.7 3.4E-17 1.2E-21 112.5 11.1 120 25-177 2-124 (135)
2 4d90_A EGF-like repeat and dis 99.6 2.8E-15 9.6E-20 103.8 9.0 115 30-169 2-132 (143)
3 1z1y_A Ookinete surface protei 99.5 3.4E-16 1.2E-20 113.2 -0.6 132 6-169 28-174 (186)
4 1yo8_A Thrombospondin-2; EGF, 99.5 1.1E-13 3.8E-18 115.7 9.8 121 27-172 2-145 (634)
5 2bou_A EGF-like module contain 99.5 4.9E-14 1.7E-18 97.6 4.9 120 31-176 5-141 (143)
6 1z1y_A Ookinete surface protei 99.3 6.7E-13 2.3E-17 95.8 0.8 100 35-165 13-126 (186)
7 1dx5_I Thrombomodulin; serine 99.2 1E-11 3.5E-16 83.1 3.2 108 26-168 2-113 (118)
8 1uzk_A Fibrillin-1; glycoprote 99.2 5.3E-12 1.8E-16 89.1 1.4 127 27-168 2-157 (162)
9 2bou_A EGF-like module contain 99.1 4.3E-11 1.5E-15 82.7 5.0 96 5-108 21-131 (143)
10 2vj3_A Neurogenic locus notch 99.1 4.3E-10 1.5E-14 76.8 7.6 86 6-109 31-117 (135)
11 4fbr_A Lectin, myxobacterial h 99.0 2.1E-13 7.1E-18 102.4 -10.9 133 27-169 32-201 (267)
12 4d90_A EGF-like repeat and dis 99.0 6.9E-10 2.4E-14 76.4 7.1 96 5-110 25-132 (143)
13 2ygq_A WIF-1, WNT inhibitory f 99.0 5.1E-10 1.8E-14 87.3 6.1 112 31-169 183-307 (324)
14 1tpg_A T-plasminogen activator 99.0 4.3E-10 1.5E-14 71.6 4.4 82 47-169 1-85 (91)
15 1emn_A Fibrillin; extracellula 98.9 1.9E-09 6.5E-14 67.2 6.3 76 68-169 3-79 (82)
16 1emn_A Fibrillin; extracellula 98.9 7.1E-10 2.4E-14 69.1 4.2 73 25-108 2-77 (82)
17 2vj2_A Jagged-1; signalling, p 98.9 8.2E-10 2.8E-14 78.3 4.5 135 4-169 18-168 (169)
18 2w86_A Fibrillin-1, fibrillin1 98.9 1.8E-10 6.3E-15 79.8 0.5 115 26-168 2-142 (147)
19 1yo8_A Thrombospondin-2; EGF, 98.8 6.4E-09 2.2E-13 87.2 7.1 88 6-108 29-141 (634)
20 1x7a_L Coagulation factor IX, 98.8 5.9E-09 2E-13 72.1 5.4 70 24-106 44-117 (146)
21 2ygq_A WIF-1, WNT inhibitory f 98.8 9.1E-09 3.1E-13 80.2 6.7 108 35-169 155-275 (324)
22 1nfu_B Coagulation factor XA, 98.8 1E-09 3.5E-14 79.2 1.1 70 24-105 38-111 (195)
23 1x7a_L Coagulation factor IX, 98.8 6.1E-09 2.1E-13 72.0 4.8 83 68-177 46-130 (146)
24 1lmj_A Fibrillin 1; EGF, calci 98.8 5.8E-09 2E-13 65.6 4.0 75 69-168 2-81 (86)
25 1aut_L Activated protein C; se 98.8 1.9E-08 6.5E-13 66.6 6.6 86 69-178 5-99 (114)
26 3fcs_B Integrin beta-3; beta p 98.7 2.2E-08 7.4E-13 85.0 7.8 123 30-171 436-601 (690)
27 4fbr_A Lectin, myxobacterial h 98.7 4.9E-11 1.7E-15 89.6 -7.9 135 21-166 92-265 (267)
28 2c4f_L Coagulation factor VII 98.7 1.5E-08 5.1E-13 69.7 4.8 73 24-106 43-120 (142)
29 1z6c_A Vitamin K-dependent pro 98.7 1.7E-08 5.8E-13 63.5 4.5 69 69-164 2-75 (87)
30 2vh0_B Activated factor XA lig 98.7 3.7E-09 1.3E-13 72.1 1.1 71 24-106 38-112 (134)
31 1lmj_A Fibrillin 1; EGF, calci 98.7 4.9E-09 1.7E-13 65.9 1.0 72 27-108 2-80 (86)
32 3h5c_B Vitamin K-dependent pro 98.6 6.8E-08 2.3E-12 75.0 7.7 83 69-177 4-88 (317)
33 3h5c_B Vitamin K-dependent pro 98.6 7.6E-08 2.6E-12 74.7 7.0 71 26-108 3-77 (317)
34 1nfu_B Coagulation factor XA, 98.6 2E-08 6.8E-13 72.5 3.1 83 68-177 40-125 (195)
35 2c4f_L Coagulation factor VII 98.6 5.1E-08 1.7E-12 67.0 4.1 87 68-178 45-134 (142)
36 2vh0_B Activated factor XA lig 98.5 3.6E-08 1.2E-12 67.1 3.1 84 68-178 40-126 (134)
37 1aut_L Activated protein C; se 98.5 1.3E-07 4.4E-12 62.5 5.0 66 35-108 22-87 (114)
38 1z6c_A Vitamin K-dependent pro 98.5 4.1E-08 1.4E-12 61.8 2.4 69 27-107 2-74 (87)
39 2w2n_E LDL receptor, low-densi 98.4 5.9E-08 2E-12 63.4 1.9 82 53-168 19-102 (107)
40 1tpg_A T-plasminogen activator 98.4 2.7E-07 9.2E-12 58.5 4.6 80 4-109 3-84 (91)
41 2w2n_E LDL receptor, low-densi 98.4 1.3E-07 4.5E-12 61.7 3.0 70 27-108 28-101 (107)
42 1edm_B Factor IX; epidermal gr 98.4 2.8E-07 9.6E-12 48.7 3.6 33 136-168 4-37 (39)
43 1dx5_I Thrombomodulin; serine 98.4 1.4E-07 4.7E-12 62.8 2.4 81 68-177 2-83 (118)
44 2gy5_A Angiopoietin-1 receptor 98.4 1.3E-06 4.4E-11 70.4 8.4 103 35-171 205-321 (423)
45 3u7u_G Neuregulin 1; signaling 98.3 4E-07 1.4E-11 51.8 3.0 35 135-169 8-48 (55)
46 3fcs_B Integrin beta-3; beta p 98.3 1.8E-06 6E-11 73.4 7.5 106 35-167 495-625 (690)
47 3p5b_L Low density lipoprotein 98.2 1.9E-06 6.4E-11 69.0 5.1 80 71-175 1-81 (400)
48 3k6s_B Integrin beta-2; cell r 98.1 1.7E-06 5.7E-11 73.4 3.8 114 35-171 437-593 (687)
49 1egf_A Epidermal growth factor 98.0 5.3E-06 1.8E-10 46.9 3.8 29 141-169 13-43 (53)
50 2k2s_B Micronemal protein 6; m 98.0 1.5E-06 5.2E-11 50.5 1.6 34 135-168 11-48 (61)
51 1hae_A Heregulin-alpha; growth 98.0 4.8E-06 1.7E-10 48.8 3.1 34 136-169 7-46 (63)
52 1edm_B Factor IX; epidermal gr 97.9 1.1E-05 3.7E-10 42.4 3.3 36 27-65 2-38 (39)
53 3p5b_L Low density lipoprotein 97.9 1.3E-05 4.5E-10 64.0 5.0 60 39-108 12-72 (400)
54 3v65_B Low-density lipoprotein 97.8 4.3E-06 1.5E-10 66.5 1.6 83 69-175 2-85 (386)
55 2gy5_A Angiopoietin-1 receptor 97.8 3.6E-05 1.2E-09 62.0 6.8 90 48-169 185-277 (423)
56 1n7d_A LDL receptor, low-densi 97.8 0.00011 3.8E-09 62.8 9.8 81 70-175 294-375 (699)
57 1uzk_A Fibrillin-1; glycoprote 97.8 1.8E-06 6E-11 60.5 -1.2 91 5-108 26-156 (162)
58 3m0c_C LDL receptor, low-densi 97.8 2.9E-05 1E-09 67.2 5.7 71 82-177 324-395 (791)
59 3v65_B Low-density lipoprotein 97.7 1E-05 3.5E-10 64.3 1.6 69 27-107 2-75 (386)
60 3u7u_G Neuregulin 1; signaling 97.6 3.6E-05 1.2E-09 43.6 3.0 38 25-65 5-48 (55)
61 2wg3_C Hedgehog-interacting pr 97.6 8.1E-06 2.8E-10 66.5 0.2 77 49-169 378-454 (463)
62 1a3p_A Epidermal growth factor 97.6 4.1E-05 1.4E-09 41.5 2.8 29 141-169 10-40 (45)
63 1k36_A Epiregulin; EGF-like fo 97.6 2.9E-05 9.9E-10 42.4 2.1 28 141-169 13-42 (46)
64 2jkh_L Factor X light chain; p 97.5 7.3E-05 2.5E-09 42.4 3.4 36 141-178 10-46 (55)
65 2k2s_B Micronemal protein 6; m 97.4 4.1E-05 1.4E-09 44.4 1.5 38 25-65 8-49 (61)
66 3m0c_C LDL receptor, low-densi 97.4 0.0003 1E-08 61.0 7.4 68 28-107 312-383 (791)
67 2p28_B Integrin beta-2; hybrid 97.4 6.5E-05 2.2E-09 55.0 2.8 95 35-169 98-213 (217)
68 1egf_A Epidermal growth factor 97.4 0.00027 9.3E-09 39.6 4.8 36 27-65 2-43 (53)
69 2w86_A Fibrillin-1, fibrillin1 97.4 4.4E-06 1.5E-10 57.5 -3.8 49 48-108 88-141 (147)
70 1nql_B Epidermal growth factor 97.4 7.2E-05 2.4E-09 42.1 1.8 29 141-169 13-43 (53)
71 2kl7_A Fibulin-4; secreted, ca 97.4 9.3E-05 3.2E-09 44.3 2.4 24 141-164 12-36 (71)
72 2vj2_A Jagged-1; signalling, p 97.3 6.7E-05 2.3E-09 52.8 1.2 53 47-108 113-166 (169)
73 1n7d_A LDL receptor, low-densi 97.2 0.00077 2.6E-08 57.7 7.5 70 27-108 293-366 (699)
74 1hae_A Heregulin-alpha; growth 97.2 0.00025 8.6E-09 41.3 3.0 41 29-74 7-53 (63)
75 3ca7_A Protein spitz; argos, E 97.2 0.00016 5.4E-09 40.5 2.0 29 141-169 15-47 (52)
76 3k6s_B Integrin beta-2; cell r 97.1 0.00057 1.9E-08 58.1 5.2 81 35-134 484-579 (687)
77 1kli_L Factor VIIA; extrinsic 97.1 0.00054 1.8E-08 40.7 3.4 36 141-178 14-51 (69)
78 1apq_A Complement protease C1R 97.0 0.00049 1.7E-08 38.4 3.0 25 141-167 21-45 (53)
79 2wg3_C Hedgehog-interacting pr 97.0 0.00019 6.4E-09 58.5 1.5 62 28-109 392-453 (463)
80 1g1s_A P-selectin; selectin, l 96.9 0.00039 1.3E-08 48.2 2.4 33 136-168 120-153 (162)
81 1klo_A Laminin; glycoprotein; 96.9 0.0016 5.4E-08 45.4 5.2 117 35-172 3-148 (162)
82 1k36_A Epiregulin; EGF-like fo 96.9 0.00046 1.6E-08 37.5 1.8 35 27-65 2-42 (46)
83 3ltf_D Protein spitz; receptor 96.8 0.00042 1.4E-08 39.7 1.5 29 141-169 15-47 (58)
84 1gl4_A Nidogen-1, entactin; im 96.8 0.00049 1.7E-08 52.1 2.2 35 141-176 14-48 (285)
85 4aqs_A Laminin subunit beta-1; 96.8 0.00091 3.1E-08 55.3 3.6 99 51-168 422-523 (525)
86 1a3p_A Epidermal growth factor 96.8 0.002 6.7E-08 34.7 3.8 35 72-109 2-39 (45)
87 1kig_L Factor XA; glycoprotein 96.7 0.00053 1.8E-08 38.1 1.2 32 147-178 11-43 (51)
88 2bz6_L Blood coagulation facto 96.5 0.002 6.9E-08 36.0 2.7 32 147-178 12-45 (53)
89 2kl7_A Fibulin-4; secreted, ca 96.3 0.0025 8.6E-08 37.9 2.6 33 27-59 2-38 (71)
90 1apq_A Complement protease C1R 96.2 0.0027 9.4E-08 35.2 2.5 23 35-59 22-44 (53)
91 1gl4_A Nidogen-1, entactin; im 96.2 0.0017 5.8E-08 49.2 1.9 39 26-65 3-44 (285)
92 2wph_E Coagulation factor IXA 96.0 0.0068 2.3E-07 34.6 3.5 32 147-178 12-45 (59)
93 1kli_L Factor VIIA; extrinsic 95.9 0.0047 1.6E-07 36.5 2.5 43 26-73 3-50 (69)
94 2jkh_L Factor X light chain; p 95.8 0.0052 1.8E-07 34.5 2.3 34 35-73 11-45 (55)
95 1nql_B Epidermal growth factor 95.7 0.0044 1.5E-07 34.6 1.5 28 35-65 14-43 (53)
96 2fd6_A Urokinase-type plasmino 95.6 0.015 5.1E-07 38.4 4.2 29 141-169 2-33 (122)
97 3cfw_A L-selectin; EGF, cell a 95.4 0.0094 3.2E-07 41.2 2.9 35 141-178 126-160 (164)
98 3zyj_B Netrin-G1; cell adhesio 95.3 0.011 3.9E-07 47.3 3.2 74 94-170 311-398 (426)
99 1iox_A Betacellulin; EGF-like 95.2 0.0096 3.3E-07 32.8 1.8 28 141-169 15-44 (50)
100 2i9a_A Urokinase-type plasmino 95.1 0.021 7.2E-07 38.9 3.9 29 141-169 14-45 (145)
101 2rnl_A Amphiregulin; AR, color 94.9 0.026 9E-07 31.0 3.1 28 141-169 19-48 (50)
102 3e50_C Protransforming growth 94.9 0.028 9.7E-07 30.8 3.2 28 141-169 15-44 (50)
103 1g1s_A P-selectin; selectin, l 94.8 0.0096 3.3E-07 41.1 1.4 39 30-74 121-160 (162)
104 3ca7_A Protein spitz; argos, E 94.7 0.017 5.6E-07 32.0 2.0 28 35-65 16-47 (52)
105 1g1t_A E-selectin; EGF, adhesi 94.6 0.011 3.7E-07 40.5 1.4 34 136-169 120-154 (157)
106 1ob1_C Major merozoite surface 94.0 0.11 3.7E-06 32.7 4.8 69 73-164 7-83 (99)
107 1xdt_R Hbegf, heparin-binding 93.8 0.018 6.3E-07 34.7 1.0 28 141-169 47-76 (79)
108 2ygo_A WIF-1, WNT inhibitory f 93.6 0.049 1.7E-06 38.5 3.0 29 138-169 151-179 (188)
109 1q4g_A Prostaglandin G/H synth 93.2 0.056 1.9E-06 45.0 3.2 35 28-65 2-39 (553)
110 1szb_A Mannose binding lectin- 93.0 0.063 2.2E-06 37.3 2.9 31 142-174 137-168 (170)
111 1n1i_A Merozoite surface prote 92.9 0.54 1.8E-05 29.8 6.7 72 71-164 11-84 (105)
112 3ltf_D Protein spitz; receptor 92.9 0.043 1.5E-06 31.1 1.5 28 35-65 16-47 (58)
113 1klo_A Laminin; glycoprotein; 92.8 0.11 3.7E-06 36.0 3.8 33 77-112 2-35 (162)
114 2p28_B Integrin beta-2; hybrid 92.7 0.046 1.6E-06 39.8 1.9 57 35-109 145-212 (217)
115 3asi_A Neurexin-1-alpha; beta- 92.3 0.1 3.5E-06 41.5 3.6 34 136-169 186-221 (410)
116 4aqs_A Laminin subunit beta-1; 92.2 0.068 2.3E-06 44.1 2.5 58 46-109 458-523 (525)
117 2bz6_L Blood coagulation facto 91.8 0.089 3E-06 29.1 2.0 34 35-73 9-44 (53)
118 3nt1_A Prostaglandin-endoperox 91.0 0.12 4.2E-06 43.2 2.8 34 29-65 2-38 (587)
119 3nt1_A Prostaglandin-endoperox 91.0 0.13 4.6E-06 42.9 3.0 37 70-110 1-38 (587)
120 1ob1_C Major merozoite surface 90.4 0.43 1.5E-05 30.0 4.2 69 35-105 12-83 (99)
121 2fd6_A Urokinase-type plasmino 90.1 0.5 1.7E-05 30.9 4.7 29 77-110 2-33 (122)
122 1n1i_A Merozoite surface prote 89.6 0.65 2.2E-05 29.4 4.6 63 35-105 18-84 (105)
123 1iox_A Betacellulin; EGF-like 89.5 0.19 6.6E-06 27.4 1.9 27 35-65 16-44 (50)
124 2rnl_A Amphiregulin; AR, color 89.0 0.61 2.1E-05 25.4 3.7 27 35-65 20-48 (50)
125 2wph_E Coagulation factor IXA 88.5 0.42 1.4E-05 27.0 2.9 23 35-59 9-32 (59)
126 3e50_C Protransforming growth 87.4 0.66 2.3E-05 25.3 3.2 27 35-65 16-44 (50)
127 1q4g_A Prostaglandin G/H synth 87.1 0.26 8.8E-06 41.0 2.0 37 70-110 2-39 (553)
128 3cfw_A L-selectin; EGF, cell a 87.0 0.33 1.1E-05 33.2 2.3 33 35-73 127-159 (164)
129 1nzi_A Complement C1S componen 86.9 0.6 2E-05 31.7 3.5 22 142-165 128-149 (159)
130 3qcw_A Neurexin-1-alpha; synap 85.5 0.55 1.9E-05 42.8 3.5 34 136-169 1018-1053(1245)
131 3zyj_B Netrin-G1; cell adhesio 84.6 0.8 2.7E-05 36.7 3.6 24 39-65 304-327 (426)
132 3qcw_A Neurexin-1-alpha; synap 84.4 0.68 2.3E-05 42.2 3.5 34 136-169 620-655 (1245)
133 3v64_C Agrin; beta propeller, 82.4 0.47 1.6E-05 36.7 1.5 29 29-59 2-32 (349)
134 1nzi_A Complement C1S componen 82.2 0.39 1.3E-05 32.6 0.8 33 25-59 114-150 (159)
135 1g1t_A E-selectin; EGF, adhesi 82.1 0.32 1.1E-05 32.9 0.4 28 35-65 127-154 (157)
136 1szb_A Mannose binding lectin- 80.8 0.37 1.3E-05 33.3 0.3 33 25-59 121-159 (170)
137 1oig_A Dumpy, CG33196-PB; stru 80.7 1.3 4.6E-05 20.4 2.1 22 117-138 4-25 (26)
138 1xdt_R Hbegf, heparin-binding 80.5 0.61 2.1E-05 28.0 1.2 34 28-65 37-76 (79)
139 2ygo_A WIF-1, WNT inhibitory f 79.9 1.6 5.4E-05 30.8 3.3 30 71-109 149-178 (188)
140 3asi_A Neurexin-1-alpha; beta- 78.2 1.7 5.8E-05 34.4 3.5 35 28-65 185-221 (410)
141 4a0p_A LRP6, LRP-6, low-densit 70.5 3.3 0.00011 34.9 3.5 41 135-177 265-310 (628)
142 3sov_A LRP-6, low-density lipo 66.9 6.2 0.00021 29.9 4.1 34 141-176 276-312 (318)
143 1ijq_A LDL receptor, low-densi 65.7 6.9 0.00023 29.5 4.2 27 146-172 282-315 (316)
144 4aqt_A Laminin subunit gamma-1 65.0 5.3 0.00018 31.4 3.4 20 94-113 270-289 (375)
145 3fby_A COMP, cartilage oligome 63.8 4.5 0.00016 33.4 2.9 29 141-169 28-57 (551)
146 3s94_A LRP-6, low-density lipo 63.4 4.9 0.00017 33.7 3.1 35 136-172 579-617 (619)
147 2i9a_A Urokinase-type plasmino 61.5 6.5 0.00022 26.4 2.9 28 35-65 15-45 (145)
148 3f1s_B Vitamin K-dependent pro 54.4 3.9 0.00013 30.5 0.9 23 35-59 13-35 (283)
149 2y38_A Laminin subunit alpha-5 52.3 29 0.00098 27.6 5.6 20 154-173 356-376 (403)
150 3v64_C Agrin; beta propeller, 51.1 9 0.00031 29.3 2.6 31 142-174 314-344 (349)
151 4a0p_A LRP6, LRP-6, low-densit 49.9 8.6 0.00029 32.3 2.4 31 27-59 264-298 (628)
152 3sov_A LRP-6, low-density lipo 47.1 16 0.00053 27.7 3.3 31 27-59 266-301 (318)
153 3s94_A LRP-6, low-density lipo 43.5 13 0.00043 31.2 2.5 31 27-59 577-610 (619)
154 1ijq_A LDL receptor, low-densi 43.3 18 0.00063 27.0 3.2 31 27-59 266-308 (316)
155 2e26_A Reelin, reeler protein; 41.9 8.4 0.00029 33.0 1.1 29 137-169 536-564 (725)
156 3f1s_B Vitamin K-dependent pro 38.3 25 0.00086 25.9 3.2 20 83-107 16-35 (283)
157 2h9e_C Anti-coagulant protein 37.3 6.7 0.00023 23.6 -0.1 31 156-186 49-79 (84)
158 3ssb_I IMPI alpha, inducible m 33.5 15 0.0005 17.7 0.8 23 156-178 6-28 (32)
159 2ddu_A Reelin; beta-jelly-roll 33.2 14 0.00047 29.2 1.0 28 136-167 192-219 (387)
160 1b9w_A Protein (merozoite surf 31.3 93 0.0032 19.1 5.1 71 73-163 7-78 (95)
161 3fby_A COMP, cartilage oligome 30.7 36 0.0012 28.1 3.1 29 35-64 29-58 (551)
162 1jlz_A Tityustoxin alpha-KTX; 27.6 22 0.00074 16.3 0.8 17 141-161 8-24 (26)
163 3t5o_A Complement component C6 27.5 35 0.0012 30.1 2.8 29 141-169 504-532 (913)
164 4aqt_A Laminin subunit gamma-1 25.4 32 0.0011 26.9 1.9 33 141-173 256-290 (375)
165 2p26_A Integrin beta-2; hybrid 23.3 53 0.0018 24.6 2.7 15 96-110 207-221 (280)
166 2e26_A Reelin, reeler protein; 22.1 35 0.0012 29.3 1.6 30 137-169 187-216 (725)
No 1
>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A*
Probab=99.73 E-value=3.4e-17 Score=112.50 Aligned_cols=120 Identities=26% Similarity=0.581 Sum_probs=95.2
Q ss_pred ccccccchh--h-CCCCCEEeeCCCCeeeeCCCCCccCCCCCCcccCCCCCCCCCCCCCCCeeecCCCCCCCCCCeeeCC
Q psy2457 25 YLGIRLSDS--Q-CGVNSECNVRNHIPVCSCPPGYTGDPLTQCRRFDPHDLCEPNPCGENAKCQPGYDKSGKDRPVCTCL 101 (189)
Q Consensus 25 c~~~~~c~~--~-C~~~~~C~~~~~~~~C~c~~g~~~~~~~~c~~~~~~~~c~~~~c~~~~~C~~~~~~~~~~~~~c~c~ 101 (189)
+.++++|.. . |.++++|++..++|.|.|++||.+. .|+ .++++|...+|...++|++ ..+.|.|.|+
T Consensus 2 c~dideC~~~~~~C~~~g~C~~~~g~~~C~C~~Gy~G~---~C~--~~~~~C~~~~C~~~~~C~~-----~~g~~~C~C~ 71 (135)
T 2vj3_A 2 AQDVDECSLGANPCEHAGKCINTLGSFECQCLQGYTGP---RCE--IDVNECVSNPCQNDATCLD-----QIGEFQCICM 71 (135)
T ss_dssp -CCCCTTTSSSCSSSTTCEEEECSSSEEEECCTTEEST---TSC--EECCTTTTCCCCSSCEEEE-----CSSCEEEECC
T ss_pred CcccccccCCCCCCCCCCEeECCCCCEEEECCCCCcCC---ccc--ccCccCCCCCCCCCCEEeC-----CCCCceeeCC
Confidence 678899983 3 9989999999999999999999998 886 4688999899999999998 5678999999
Q ss_pred CCcccCCCCcCccCCCCCCCCCCCCCccCCCeecCCccccCCCCCEeeeCCCCeeeeCCCCCccCCcccCeecCCc
Q psy2457 102 PGYVGDALTYCRRGECQSDAECNYDQVCNNYNCEKACTSQCGINAQCTARNHVATCSCPAGYQGDALSRCYPAETT 177 (189)
Q Consensus 102 ~g~~~~~~~~c~~~~c~~~~~c~~~~~c~~~~c~~~c~~~C~~~~~C~~~~g~~~C~C~~G~~g~~~~~c~~~~~~ 177 (189)
+||.|..+. .++++|... +|.++++|++..++|.|.|++||+|..+. .++..+
T Consensus 72 ~G~~G~~C~-------~~~~~C~~~--------------~C~~~g~C~~~~g~~~C~C~~G~~G~~C~--~~i~~C 124 (135)
T 2vj3_A 72 PGYEGVHCE-------VNTDECASS--------------PCLHNGRCLDKINEFQCECPTGFTGHLCQ--VDLHHI 124 (135)
T ss_dssp TTEESSSSC-------EECCTTTTC--------------CSTTTCEEEECSSCEEEECCTTEESSSSC--EECC--
T ss_pred CCCcCCcce-------ecCCcccCC--------------CcCCCCEeECCCCCeEEECCCCCcCCccC--ccCccc
Confidence 999987532 022233221 58888999999999999999999998753 355554
No 2
>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens}
Probab=99.61 E-value=2.8e-15 Score=103.82 Aligned_cols=115 Identities=27% Similarity=0.624 Sum_probs=82.2
Q ss_pred cchhh-CCCCCEEeeCC--CCeeeeCCCCCccCCCCCCccc----------CCCCCCCCCCCCCCCeeecCCC--CCCCC
Q psy2457 30 LSDSQ-CGVNSECNVRN--HIPVCSCPPGYTGDPLTQCRRF----------DPHDLCEPNPCGENAKCQPGYD--KSGKD 94 (189)
Q Consensus 30 ~c~~~-C~~~~~C~~~~--~~~~C~c~~g~~~~~~~~c~~~----------~~~~~c~~~~c~~~~~C~~~~~--~~~~~ 94 (189)
+|... |.++++|++.. ++|.|.|++||.+. .|+.. ..+++|...+|.+.+.|..... ....+
T Consensus 2 ~C~~~pC~~~g~C~~~~~~g~~~C~C~~G~~G~---~C~~~~~~~~~~~~c~~~~~C~~~~C~~~g~C~~~~~~~~~~~~ 78 (143)
T 4d90_A 2 ICDPNPCENGGICLPGLADGSFSCECPDGFTDP---NCSSVVEVASDEEEPTSAGPCTPNPCHNGGTCEISEAYRGDTFI 78 (143)
T ss_dssp -CCSCCCGGGCEEEC-----CCEEECCTTCCTT---TTCSCCCCTTTTTSCCCCCTTSSCCCCTTCEEEECCCEETTEEC
T ss_pred cCCCCcCCCCCEeeCCCCCCCEEeECCCCCCCC---CCccCccccccccccccCCcCCCCCCCCCCEecCCCccccCCCC
Confidence 34444 77788999865 68999999999988 67410 1346777888999999983000 00335
Q ss_pred CCeeeCCCCcccCCCCcCccCCCC-CCCCCCCCCccCCCeecCCccccCCCCCEeeeCCCCeeeeCCCCCccCCcc
Q psy2457 95 RPVCTCLPGYVGDALTYCRRGECQ-SDAECNYDQVCNNYNCEKACTSQCGINAQCTARNHVATCSCPAGYQGDALS 169 (189)
Q Consensus 95 ~~~c~c~~g~~~~~~~~c~~~~c~-~~~~c~~~~~c~~~~c~~~c~~~C~~~~~C~~~~g~~~C~C~~G~~g~~~~ 169 (189)
.|.|.|++||.|.. |. ++++|... +|.++++|++..++|.|.|++||+|+++.
T Consensus 79 ~~~C~C~~G~~G~~--------C~~~i~~C~~~--------------~C~~~~~C~~~~g~~~C~C~~G~~G~~c~ 132 (143)
T 4d90_A 79 GYVCKCPRGFNGIH--------CQHNINECEVE--------------PCKNGGICTDLVANYSCECPGEFMGRNCQ 132 (143)
T ss_dssp CEEEECCTTEESTT--------SCEECCTTTTC--------------CSCTTCEEEEETTEEEEECCTTCBSTTSC
T ss_pred CeEeECcCCCcCCC--------cccCCCcCCCC--------------CCCCCCEeECCCCCeEeECCCCCccCCce
Confidence 79999999998875 33 33333321 58888999999999999999999999975
No 3
>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A
Probab=99.54 E-value=3.4e-16 Score=113.20 Aligned_cols=132 Identities=25% Similarity=0.491 Sum_probs=97.9
Q ss_pred CCCCCCccCCCCcccCCCCccccccch----hh-CCCCCEEeeCC-----CCeeeeCCCCCccCCCCCCcccCCCCCCCC
Q psy2457 6 PPRPGFEPSPSRLVASPRDYLGIRLSD----SQ-CGVNSECNVRN-----HIPVCSCPPGYTGDPLTQCRRFDPHDLCEP 75 (189)
Q Consensus 6 ~~~~gf~~~~~~~~~~~~~c~~~~~c~----~~-C~~~~~C~~~~-----~~~~C~c~~g~~~~~~~~c~~~~~~~~c~~ 75 (189)
.|.+||.+. +...|.++++|. .. |.++++|++.. ++|.|.|++||.+... .| .+++|..
T Consensus 28 ~C~~G~~g~------~~~~C~~id~C~~~~~~~~C~~~~~C~~~~~~~~~g~y~C~C~~G~~g~~~-~C----~~d~C~~ 96 (186)
T 1z1y_A 28 MCNEGLVHL------SENTCEEXNECXXETLGXACGEFGQCIENPDPAQVNMYXCGCIEGYTLXED-TC----VLDVCQY 96 (186)
T ss_dssp EECTTEEEE------ETTEEEECCCCSGGGTTSEEETTEEEEECSSTTSSCSEEEEECTTEEEETT-EE----EEGGGTT
T ss_pred ECCCCCccC------CCCccCCCCcccCCCCCCCCCCCCEeecCCCCcCCCCEECCCCCCCccCCC-CC----CCCcCcC
Confidence 467788753 345688999998 34 88889999998 8999999999998732 23 3688888
Q ss_pred CCCCCCCeee----cCCCCCCCCCCeeeCCCCcccCCCCcCccCCCCCCCCCCCCCccCCCeecCCccccC-CCCCEeee
Q psy2457 76 NPCGENAKCQ----PGYDKSGKDRPVCTCLPGYVGDALTYCRRGECQSDAECNYDQVCNNYNCEKACTSQC-GINAQCTA 150 (189)
Q Consensus 76 ~~c~~~~~C~----~~~~~~~~~~~~c~c~~g~~~~~~~~c~~~~c~~~~~c~~~~~c~~~~c~~~c~~~C-~~~~~C~~ 150 (189)
.+|...+.|+ + ..++|.|.|++||.+.... ...|.++. +++|..+| .++++|++
T Consensus 97 ~~C~~~g~C~~~~~~-----~~g~~~C~C~~Gy~g~~~~---~~~C~~~~-------------~~~C~~~C~~~~~~C~n 155 (186)
T 1z1y_A 97 XNCGESGECIVEYLS-----EIQSAGCSCAIGXVPNPED---EXXCTXTG-------------ETACQLXCNTDNEVCXN 155 (186)
T ss_dssp CCCCTTEEEEEEEET-----TEEEEEEEECTEEEEETTT---TTEEEEEE-------------CCCCCCCCCTTTEEEEE
T ss_pred CCCCCCCEEeeCCcC-----CCCCceEECCCCCcccCCC---CCcceEcC-------------CCcccccccccCcceec
Confidence 8999889998 5 4567999999999884210 01122210 12333358 77899999
Q ss_pred CCCCeeeeCCCCCccCCcc
Q psy2457 151 RNHVATCSCPAGYQGDALS 169 (189)
Q Consensus 151 ~~g~~~C~C~~G~~g~~~~ 169 (189)
..++|.|.|++||+|+.+.
T Consensus 156 ~~g~y~C~C~~G~~g~~~~ 174 (186)
T 1z1y_A 156 VEGVYXCQCMEGFTFDXEX 174 (186)
T ss_dssp ETTEEEEEECTTCEEETTT
T ss_pred CCCCeeeECCCCCccCccc
Confidence 9999999999999988864
No 4
>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A*
Probab=99.48 E-value=1.1e-13 Score=115.67 Aligned_cols=121 Identities=27% Similarity=0.626 Sum_probs=90.7
Q ss_pred ccccchhh-CCCCCEEeeCCC-Ceee-eCCCCCccCCCCCCcccCCCCCCCCCC--CCCCC---eeecCCCCCCCCCCee
Q psy2457 27 GIRLSDSQ-CGVNSECNVRNH-IPVC-SCPPGYTGDPLTQCRRFDPHDLCEPNP--CGENA---KCQPGYDKSGKDRPVC 98 (189)
Q Consensus 27 ~~~~c~~~-C~~~~~C~~~~~-~~~C-~c~~g~~~~~~~~c~~~~~~~~c~~~~--c~~~~---~C~~~~~~~~~~~~~c 98 (189)
++++|... |.++++|++..+ +|.| .|++||.+... .| ..+++|...+ |...+ .|.+ ..++|.|
T Consensus 2 DIDeC~~nPC~~gg~C~n~~~Gsy~C~~C~~GytGdg~-~C---eDiDEC~~~p~~C~~gg~~~~CvN-----t~gsY~C 72 (634)
T 1yo8_A 2 DPDGCLSNPCFPGAQCSSFPDGSWSCGFCPVGFLGNGT-HC---EDLDECALVPDICFSTSKVPRCVN-----TQPGFHC 72 (634)
T ss_dssp --CGGGGCCSCTTCCEEECTTSCEEECCCCTTBCSCSS-SC---CBCCTTTTSCCCSCCCSSSCCEEE-----CSSSEEE
T ss_pred cccccCCCCCCCCCEEecCCCCCeECCcCCCccCCCCC-Cc---cccccccCCCCcccCCccccceee-----ccCceec
Confidence 57888766 998899999874 5999 99999998433 79 4789998777 98888 8998 6678999
Q ss_pred e-CCCCcccCCCCcC-------ccCCCCCCCCCCCCCccCCCeecCCccc---cCCCCCEeeeCC----CCeeeeCCCCC
Q psy2457 99 T-CLPGYVGDALTYC-------RRGECQSDAECNYDQVCNNYNCEKACTS---QCGINAQCTARN----HVATCSCPAGY 163 (189)
Q Consensus 99 ~-c~~g~~~~~~~~c-------~~~~c~~~~~c~~~~~c~~~~c~~~c~~---~C~~~~~C~~~~----g~~~C~C~~G~ 163 (189)
. |++||.|..+..- ....|.. +++|.. +|.++++|++.. ++|+|.|++||
T Consensus 73 ~~C~~Gy~G~~c~g~g~~~~~~dg~~C~d---------------ideC~~~~~pC~~~~~Cvnt~~~~~GsY~C~C~~Gy 137 (634)
T 1yo8_A 73 LPCPPRYRGNQPVGVGLEAAKTEKQVCEP---------------ENPCKDKTHNCHKHAECIYLGHFSDPMYKCECQTGY 137 (634)
T ss_dssp CCCCTTEEECCCEESSSHHHHSCCCCEEE---------------CCTTTTTCCCCCTTEEEEECCTTCSSSEEEEECTTE
T ss_pred ccCCCCcccCccccccccccccCCCcccc---------------cccccCCCcccccCccccccccccccceeeeccCCc
Confidence 8 9999998763200 0011323 344432 699899999998 99999999999
Q ss_pred ccCCcccCe
Q psy2457 164 QGDALSRCY 172 (189)
Q Consensus 164 ~g~~~~~c~ 172 (189)
+|++.. |.
T Consensus 138 ~GdG~~-Ce 145 (634)
T 1yo8_A 138 AGDGLI-CG 145 (634)
T ss_dssp EESSSS-EE
T ss_pred cccCcc-cc
Confidence 985433 54
No 5
>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A
Probab=99.46 E-value=4.9e-14 Score=97.58 Aligned_cols=120 Identities=23% Similarity=0.540 Sum_probs=86.5
Q ss_pred chhhCCCCCEEeeCCCCeeeeCCCCCccCC------CCCCcccCCCCCCCCC---CCCCCCeeecCCCCCCCCCCeeeCC
Q psy2457 31 SDSQCGVNSECNVRNHIPVCSCPPGYTGDP------LTQCRRFDPHDLCEPN---PCGENAKCQPGYDKSGKDRPVCTCL 101 (189)
Q Consensus 31 c~~~C~~~~~C~~~~~~~~C~c~~g~~~~~------~~~c~~~~~~~~c~~~---~c~~~~~C~~~~~~~~~~~~~c~c~ 101 (189)
|..+|.++++|++. |.|.|++||.+.. ...|+ ++++|... +|...+.|++ ..++|.|.|+
T Consensus 5 C~~~C~~~~~C~~~---~~C~C~~G~~g~~~~~~~~~~~C~---dideC~~~~~~~C~~~~~C~n-----~~g~y~C~C~ 73 (143)
T 2bou_A 5 CARWCPQDSSCVNA---TACRCNPGFSSFSEIITTPMETCD---DINECATLSKVSCGKFSDCWN-----TEGSYDCVCS 73 (143)
T ss_dssp CCTTCCTTEEESSS---SCEEECTTEECSSSSBCSTTCCCE---ECCGGGC----CCCTTEEEEE-----CSSCEEEEEC
T ss_pred CcCcCCCCCEEcCC---CEEeCCCCCcCccccccCCCCcCC---ccccccCCCCCCCCCCCEEEc-----CCCCeEeECC
Confidence 33347778899764 8999999999741 12673 67888764 8988899998 6678999999
Q ss_pred CCcccCCCCc-C---ccCCCCCCCCCCCCCccCCCeecCCccc---cCCCCCEeeeCCCCeeeeCCCCCccCCc-ccCee
Q psy2457 102 PGYVGDALTY-C---RRGECQSDAECNYDQVCNNYNCEKACTS---QCGINAQCTARNHVATCSCPAGYQGDAL-SRCYP 173 (189)
Q Consensus 102 ~g~~~~~~~~-c---~~~~c~~~~~c~~~~~c~~~~c~~~c~~---~C~~~~~C~~~~g~~~C~C~~G~~g~~~-~~c~~ 173 (189)
+||.+..... + ....|.+ +|+|.. +|.++++|++..++|.|.|++||+|... ..|.+
T Consensus 74 ~Gy~g~~~~~~~~~~~~~~C~d---------------ideC~~~~~~C~~~~~C~n~~g~y~C~C~~Gy~g~~~~~~C~~ 138 (143)
T 2bou_A 74 PGYEPVSGAKTFKNESENTCQD---------------VDECSSGQHQCDSSTVCFNTVGSYSCRCRPGWKPRHGIPNNQK 138 (143)
T ss_dssp TTEEETTCCSCBSSGGGCCEEE---------------CCHHHHTCCCCCTTSEEEECSSCEEEECCSSSCBCTTCCSSBT
T ss_pred CCcccCcCccccccCCCCCcCC---------------ccCccCcCCCCCCCCEEECCCCCEEeeCCCCcccCCCCccCcc
Confidence 9998874210 0 0012333 455542 6988899999999999999999998875 34665
Q ss_pred cCC
Q psy2457 174 AET 176 (189)
Q Consensus 174 ~~~ 176 (189)
..+
T Consensus 139 ~~~ 141 (143)
T 2bou_A 139 DTV 141 (143)
T ss_dssp TCC
T ss_pred CCc
Confidence 554
No 6
>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A
Probab=99.26 E-value=6.7e-13 Score=95.78 Aligned_cols=100 Identities=25% Similarity=0.588 Sum_probs=78.3
Q ss_pred CCCCCEEeeCCCCeeeeCCCCCccCCCCCCcccCCCCCCC----CCCCCCCCeeecCCCCCCC-----CCCeeeCCCCcc
Q psy2457 35 CGVNSECNVRNHIPVCSCPPGYTGDPLTQCRRFDPHDLCE----PNPCGENAKCQPGYDKSGK-----DRPVCTCLPGYV 105 (189)
Q Consensus 35 C~~~~~C~~~~~~~~C~c~~g~~~~~~~~c~~~~~~~~c~----~~~c~~~~~C~~~~~~~~~-----~~~~c~c~~g~~ 105 (189)
|.+ ++|++..++|+|.|++||.+.+...|+ ++++|. ..+|...+.|++ .. ++|.|.|++||.
T Consensus 13 C~n-g~C~~~~g~~~C~C~~G~~g~~~~~C~---~id~C~~~~~~~~C~~~~~C~~-----~~~~~~~g~y~C~C~~G~~ 83 (186)
T 1z1y_A 13 CXN-GQLVQMSNHFXCMCNEGLVHLSENTCE---EXNECXXETLGXACGEFGQCIE-----NPDPAQVNMYXCGCIEGYT 83 (186)
T ss_dssp CBT-EEEEECSSCEEEEECTTEEEEETTEEE---ECCCCSGGGTTSEEETTEEEEE-----CSSTTSSCSEEEEECTTEE
T ss_pred CCC-CEeECCCCCeEeECCCCCccCCCCccC---CCCcccCCCCCCCCCCCCEeec-----CCCCcCCCCEECCCCCCCc
Confidence 664 599999999999999999876322574 678998 678988899998 44 689999999999
Q ss_pred cCCCCcCccCCCCCCCCCCCCCccCCCeecCCccc-cCCCCCEee----eCCCCeeeeCCCCCcc
Q psy2457 106 GDALTYCRRGECQSDAECNYDQVCNNYNCEKACTS-QCGINAQCT----ARNHVATCSCPAGYQG 165 (189)
Q Consensus 106 ~~~~~~c~~~~c~~~~~c~~~~~c~~~~c~~~c~~-~C~~~~~C~----~~~g~~~C~C~~G~~g 165 (189)
+.... |++ ++|.. +|.++++|+ +..++|.|.|++||+|
T Consensus 84 g~~~~-C~~---------------------d~C~~~~C~~~g~C~~~~~~~~g~~~C~C~~Gy~g 126 (186)
T 1z1y_A 84 LXEDT-CVL---------------------DVCQYXNCGESGECIVEYLSEIQSAGCSCAIGXVP 126 (186)
T ss_dssp EETTE-EEE---------------------GGGTTCCCCTTEEEEEEEETTEEEEEEEECTEEEE
T ss_pred cCCCC-CCC---------------------CcCcCCCCCCCCEEeeCCcCCCCCceEECCCCCcc
Confidence 87532 222 23322 577788898 7788999999999998
No 7
>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A
Probab=99.18 E-value=1e-11 Score=83.06 Aligned_cols=108 Identities=22% Similarity=0.544 Sum_probs=74.3
Q ss_pred cccccchhh-CCCCCEEeeC-CCCeeeeCCCCCccCCC--CCCcccCCCCCCCCCCCCCCCeeecCCCCCCCCCCeeeCC
Q psy2457 26 LGIRLSDSQ-CGVNSECNVR-NHIPVCSCPPGYTGDPL--TQCRRFDPHDLCEPNPCGENAKCQPGYDKSGKDRPVCTCL 101 (189)
Q Consensus 26 ~~~~~c~~~-C~~~~~C~~~-~~~~~C~c~~g~~~~~~--~~c~~~~~~~~c~~~~c~~~~~C~~~~~~~~~~~~~c~c~ 101 (189)
.++++|... |.+ +|++. .++|.|.|++||.+... ..|+ ++|...+|. +.|.+ . +.|.|.|+
T Consensus 2 ~dideC~~~pC~~--~C~~~~~g~y~C~C~~Gy~g~~~~~~~C~-----~~C~~~~C~--~~C~~-----~-~~y~C~C~ 66 (118)
T 1dx5_I 2 EPVDPCFRANCEY--QCQPLDQTSYLCVCAEGFAPIPHEPHRCQ-----MFCNQTACP--ADCDP-----N-TQASCECP 66 (118)
T ss_dssp CCCCGGGGCCCSS--EEEECSSSCEEEECCTTEEEETTEEEEEE-----ECCCSSEEE--CEECT-----T-STTCEECC
T ss_pred CccccCCCCCCCC--CCCCCCCCCEEeECCCCccccCCCCCccc-----cccCCCCCC--CcccC-----C-CCeEeECC
Confidence 367888766 874 99999 89999999999998721 0131 234444554 56764 2 67999999
Q ss_pred CCcccCCCCcCccCCCCCCCCCCCCCccCCCeecCCccccCCCCCEeeeCCCCeeeeCCCCCccCCc
Q psy2457 102 PGYVGDALTYCRRGECQSDAECNYDQVCNNYNCEKACTSQCGINAQCTARNHVATCSCPAGYQGDAL 168 (189)
Q Consensus 102 ~g~~~~~~~~c~~~~c~~~~~c~~~~~c~~~~c~~~c~~~C~~~~~C~~~~g~~~C~C~~G~~g~~~ 168 (189)
+||.+..- ..|.++++|... .+| +++|++..++|.|.|++||+|...
T Consensus 67 ~Gy~~~~g-----~~C~dideC~~~-------------~~C--~~~C~n~~g~y~C~C~~G~~g~~~ 113 (118)
T 1dx5_I 67 EGYILDDG-----FICTDIDECENG-------------GFC--SGVCHNLPGTFECICGPDSALAGQ 113 (118)
T ss_dssp TTEEEETT-----TEEEECCHHHHC-------------SSC--SSEEEECSSSEEEEECSSSSCEEE
T ss_pred CCccCCCC-----CccccccccCCC-------------CCC--cCeEEeCCCCEEEECCCCCccCCC
Confidence 99985421 124343333220 157 579999999999999999987553
No 8
>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A
Probab=99.16 E-value=5.3e-12 Score=89.09 Aligned_cols=127 Identities=20% Similarity=0.459 Sum_probs=76.8
Q ss_pred ccccchh-h-CCCCCEEeeCCCCeeeeCCCCCccCCC-CCCcccCCCCC--CCC--CCC--CCCCeeecCCCCCCCC---
Q psy2457 27 GIRLSDS-Q-CGVNSECNVRNHIPVCSCPPGYTGDPL-TQCRRFDPHDL--CEP--NPC--GENAKCQPGYDKSGKD--- 94 (189)
Q Consensus 27 ~~~~c~~-~-C~~~~~C~~~~~~~~C~c~~g~~~~~~-~~c~~~~~~~~--c~~--~~c--~~~~~C~~~~~~~~~~--- 94 (189)
|+++|.. . |. +++|+++.++|+|.|++||.+... ..|+ ++++ |.. .++ ...+.|.+ ..+
T Consensus 2 dideC~~~~~C~-~~~C~n~~gsy~C~C~~Gy~~~~~g~~C~---d~~~~~C~~~~~~c~~~~~~~C~~-----~~~~~~ 72 (162)
T 1uzk_A 2 DVNECLDPTTCI-SGNCVNTPGSYICDCPPDFELNPTRVGCV---DTRSGNCYLDIRPRGDNGDTACSN-----EIGVGV 72 (162)
T ss_dssp CCCGGGSTTSSB-TSEEEEETTEEEEECCTTCEECTTSSBEE---CCCCEEEEEEC----------CEE-----EEEEEE
T ss_pred ccccCCCCCCCC-CCEeECCCCCEEEeCCCCCeECCCCCccc---CCCCCcccCCCcccCCCCCCcccC-----CcCCcc
Confidence 6788875 3 86 589999999999999999984311 1674 4554 643 223 23556765 223
Q ss_pred -CCeeeCCCCcc-cCCCCcCccCCCCCCC------CCCC--CCccC--CCee--cCCccc---cCCCCCEeeeCCCCeee
Q psy2457 95 -RPVCTCLPGYV-GDALTYCRRGECQSDA------ECNY--DQVCN--NYNC--EKACTS---QCGINAQCTARNHVATC 157 (189)
Q Consensus 95 -~~~c~c~~g~~-~~~~~~c~~~~c~~~~------~c~~--~~~c~--~~~c--~~~c~~---~C~~~~~C~~~~g~~~C 157 (189)
.|.|.|.+||. +..+.. |.... .|.. .-+-. ...| ||+|.. +|.+ ++|++..++|+|
T Consensus 73 ~~~~C~C~~G~~~~~~C~~-----C~~~~~~~y~C~C~~g~G~~~~~~~~~c~dideC~~~~~~C~~-g~C~n~~gsy~C 146 (162)
T 1uzk_A 73 SKASCCCSLGKAWGTPCEM-----CPAVNTSEYKILCPGGEGFRPNPITVILEDIDECQELPGLCQG-GKCINTFGSFQC 146 (162)
T ss_dssp CHHHHHTTTCCEETTTTEE-----CCCTTSHHHHHHCTTCTTEEECTTTCCEEECCHHHHCGGGGBT-SEEEECSSCEEE
T ss_pred cCceeeCCCCCCcCCCccc-----CCCCCCCCceeECCCCCCcccCCCCCccCccccccCCCCCcCC-CEeEcCCCCEEe
Confidence 58899999987 433221 11100 0110 00000 0122 688864 5975 799999999999
Q ss_pred eCCCCCccCCc
Q psy2457 158 SCPAGYQGDAL 168 (189)
Q Consensus 158 ~C~~G~~g~~~ 168 (189)
.|++||+|...
T Consensus 147 ~C~~Gy~g~~d 157 (162)
T 1uzk_A 147 RCPTGYYLNED 157 (162)
T ss_dssp ECCTTCCBCTT
T ss_pred eCCCCccCCCC
Confidence 99999998764
No 9
>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A
Probab=99.14 E-value=4.3e-11 Score=82.66 Aligned_cols=96 Identities=23% Similarity=0.469 Sum_probs=74.7
Q ss_pred CCCCCCCccCCCCcccCCCCccccccchhh----CCCCCEEeeCCCCeeeeCCCCCccCCC---------CCCcccCCCC
Q psy2457 5 FPPRPGFEPSPSRLVASPRDYLGIRLSDSQ----CGVNSECNVRNHIPVCSCPPGYTGDPL---------TQCRRFDPHD 71 (189)
Q Consensus 5 ~~~~~gf~~~~~~~~~~~~~c~~~~~c~~~----C~~~~~C~~~~~~~~C~c~~g~~~~~~---------~~c~~~~~~~ 71 (189)
..|.+||.+.+..+......|.++++|... |.+++.|++..++|.|.|++||.+..- ..|+ +++
T Consensus 21 C~C~~G~~g~~~~~~~~~~~C~dideC~~~~~~~C~~~~~C~n~~g~y~C~C~~Gy~g~~~~~~~~~~~~~~C~---did 97 (143)
T 2bou_A 21 CRCNPGFSSFSEIITTPMETCDDINECATLSKVSCGKFSDCWNTEGSYDCVCSPGYEPVSGAKTFKNESENTCQ---DVD 97 (143)
T ss_dssp EEECTTEECSSSSBCSTTCCCEECCGGGC----CCCTTEEEEECSSCEEEEECTTEEETTCCSCBSSGGGCCEE---ECC
T ss_pred EeCCCCCcCccccccCCCCcCCccccccCCCCCCCCCCCEEEcCCCCeEeECCCCcccCcCccccccCCCCCcC---Ccc
Confidence 457789987652223345688999999863 887889999999999999999987621 1453 577
Q ss_pred CCC--CCCCCCCCeeecCCCCCCCCCCeeeCCCCcccCC
Q psy2457 72 LCE--PNPCGENAKCQPGYDKSGKDRPVCTCLPGYVGDA 108 (189)
Q Consensus 72 ~c~--~~~c~~~~~C~~~~~~~~~~~~~c~c~~g~~~~~ 108 (189)
+|. ..+|...+.|++ ..++|.|.|++||.+..
T Consensus 98 eC~~~~~~C~~~~~C~n-----~~g~y~C~C~~Gy~g~~ 131 (143)
T 2bou_A 98 ECSSGQHQCDSSTVCFN-----TVGSYSCRCRPGWKPRH 131 (143)
T ss_dssp HHHHTCCCCCTTSEEEE-----CSSCEEEECCSSSCBCT
T ss_pred CccCcCCCCCCCCEEEC-----CCCCEEeeCCCCcccCC
Confidence 886 378988899998 67889999999998875
No 10
>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A*
Probab=99.07 E-value=4.3e-10 Score=76.82 Aligned_cols=86 Identities=26% Similarity=0.558 Sum_probs=70.8
Q ss_pred CCCCCCccCCCCcccCCCCccccccchhh-CCCCCEEeeCCCCeeeeCCCCCccCCCCCCcccCCCCCCCCCCCCCCCee
Q psy2457 6 PPRPGFEPSPSRLVASPRDYLGIRLSDSQ-CGVNSECNVRNHIPVCSCPPGYTGDPLTQCRRFDPHDLCEPNPCGENAKC 84 (189)
Q Consensus 6 ~~~~gf~~~~~~~~~~~~~c~~~~~c~~~-C~~~~~C~~~~~~~~C~c~~g~~~~~~~~c~~~~~~~~c~~~~c~~~~~C 84 (189)
.|.+||.+. ....++++|... |.++++|++..++|.|.|++||.+. .|+ .++++|...+|...+.|
T Consensus 31 ~C~~Gy~G~--------~C~~~~~~C~~~~C~~~~~C~~~~g~~~C~C~~G~~G~---~C~--~~~~~C~~~~C~~~g~C 97 (135)
T 2vj3_A 31 QCLQGYTGP--------RCEIDVNECVSNPCQNDATCLDQIGEFQCICMPGYEGV---HCE--VNTDECASSPCLHNGRC 97 (135)
T ss_dssp ECCTTEEST--------TSCEECCTTTTCCCCSSCEEEECSSCEEEECCTTEESS---SSC--EECCTTTTCCSTTTCEE
T ss_pred ECCCCCcCC--------cccccCccCCCCCCCCCCEEeCCCCCceeeCCCCCcCC---cce--ecCCcccCCCcCCCCEe
Confidence 466677542 222478888877 8888999999999999999999998 886 46789988999999999
Q ss_pred ecCCCCCCCCCCeeeCCCCcccCCC
Q psy2457 85 QPGYDKSGKDRPVCTCLPGYVGDAL 109 (189)
Q Consensus 85 ~~~~~~~~~~~~~c~c~~g~~~~~~ 109 (189)
++ ..+.|.|.|++||.|..+
T Consensus 98 ~~-----~~g~~~C~C~~G~~G~~C 117 (135)
T 2vj3_A 98 LD-----KINEFQCECPTGFTGHLC 117 (135)
T ss_dssp EE-----CSSCEEEECCTTEESSSS
T ss_pred EC-----CCCCeEEECCCCCcCCcc
Confidence 87 567899999999998763
No 11
>4fbr_A Lectin, myxobacterial hemagglutinin; beta-barrel, HIV-inactivating, carbohydrate binding protein; 1.60A {Myxococcus xanthus} PDB: 4fbv_A*
Probab=99.04 E-value=2.1e-13 Score=102.43 Aligned_cols=133 Identities=11% Similarity=0.019 Sum_probs=89.0
Q ss_pred ccccchhhCCCCCEEeeCCCCeeeeCCCCCccCCCCCCcccCCCCC-----------------------------CCCCC
Q psy2457 27 GIRLSDSQCGVNSECNVRNHIPVCSCPPGYTGDPLTQCRRFDPHDL-----------------------------CEPNP 77 (189)
Q Consensus 27 ~~~~c~~~C~~~~~C~~~~~~~~C~c~~g~~~~~~~~c~~~~~~~~-----------------------------c~~~~ 77 (189)
.+..+..+|.++++|++..++|.|.|+.||.+. .|+ ..+++ |...|
T Consensus 32 n~~~~~~~c~ngG~C~~g~~~y~C~Cp~Gf~G~---~Ce--~ni~ec~~~~~c~s~pC~nggtc~~G~~c~~~~eC~s~p 106 (267)
T 4fbr_A 32 NVVALDIKSDDGGKTLKGTMTYNGEGPIGFRGT---LSS--ANNYTVENQWGGTSAPWQPGGVWVLGARDKQNIVAVSIK 106 (267)
T ss_dssp CEEEEEEECSSTTSEEEEEEEETTSCCEEEEEE---ECS--TTEEEEEEESSSTTSCEEEEEEEECCCCSSCCEEEEEEE
T ss_pred ccccCCCCcCCCCeecCCCCCeEEeCCCCcccc---ccc--ccccccccccCcCCCcccCCCeeeccCccccccccCCCC
Confidence 444443348889999999999999999999987 665 34443 33345
Q ss_pred CCCCCeeecCCCCCCCCCCeeeCCCCcccCCCCc----CccCCCCCCCCCCCCCccCC-Cee---cCCccccCCCCCEee
Q psy2457 78 CGENAKCQPGYDKSGKDRPVCTCLPGYVGDALTY----CRRGECQSDAECNYDQVCNN-YNC---EKACTSQCGINAQCT 149 (189)
Q Consensus 78 c~~~~~C~~~~~~~~~~~~~c~c~~g~~~~~~~~----c~~~~c~~~~~c~~~~~c~~-~~c---~~~c~~~C~~~~~C~ 149 (189)
|.+.++|++ ...+|.|.|+.||.|..+.. |+...+.....|....+++. .+| ++.+..+|.++++|+
T Consensus 107 C~ngG~C~~-----~~~sy~C~C~~Gf~G~~Ce~~~d~C~n~~~c~s~pC~ngg~c~~G~~c~~~i~c~~~~c~ngg~C~ 181 (267)
T 4fbr_A 107 SNDGGKTLT-----GTTTYNGEGPIGFKSEVTDGDTYSVENQWGGSAAPWHSGGVWVLGTRGKQNVINVDAKSNDGGKTL 181 (267)
T ss_dssp CSSTTSEEE-----EEEEETTSCCEEEEEEECCCCEEEEEEECSSTTSCCEEEEEEECCSSTTSCEEEEEEECSSTTSEE
T ss_pred CCCCCEEec-----CCccEEeeCCCCccccCCCCCcccccccCCcCCccccCCcceecccccccccccCCCCCCCCCEee
Confidence 667777776 45679999999999987541 11111222223332222221 222 333333899999999
Q ss_pred eCCCCeeeeCCCCCccCCcc
Q psy2457 150 ARNHVATCSCPAGYQGDALS 169 (189)
Q Consensus 150 ~~~g~~~C~C~~G~~g~~~~ 169 (189)
+...+|+|.|++||+|..+.
T Consensus 182 dg~~~y~C~Cp~Gf~G~~c~ 201 (267)
T 4fbr_A 182 SGTMTYNGEGPIGFRGTLTS 201 (267)
T ss_dssp EEEEEETTSCCEEEEEEEEE
T ss_pred CCCCCeEEeCCCCccccccc
Confidence 99999999999999988763
No 12
>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens}
Probab=99.02 E-value=6.9e-10 Score=76.45 Aligned_cols=96 Identities=20% Similarity=0.457 Sum_probs=74.2
Q ss_pred CCCCCCCccCCCC----cccCCCCccccccchhh-CCCCCEEe-------eCCCCeeeeCCCCCccCCCCCCcccCCCCC
Q psy2457 5 FPPRPGFEPSPSR----LVASPRDYLGIRLSDSQ-CGVNSECN-------VRNHIPVCSCPPGYTGDPLTQCRRFDPHDL 72 (189)
Q Consensus 5 ~~~~~gf~~~~~~----~~~~~~~c~~~~~c~~~-C~~~~~C~-------~~~~~~~C~c~~g~~~~~~~~c~~~~~~~~ 72 (189)
..|.+||.+..=+ ...+...+.++++|... |.++++|+ +..++|.|.|++||.+. .|+ .++++
T Consensus 25 C~C~~G~~G~~C~~~~~~~~~~~~c~~~~~C~~~~C~~~g~C~~~~~~~~~~~~~~~C~C~~G~~G~---~C~--~~i~~ 99 (143)
T 4d90_A 25 CECPDGFTDPNCSSVVEVASDEEEPTSAGPCTPNPCHNGGTCEISEAYRGDTFIGYVCKCPRGFNGI---HCQ--HNINE 99 (143)
T ss_dssp EECCTTCCTTTTCSCCCCTTTTTSCCCCCTTSSCCCCTTCEEEECCCEETTEECCEEEECCTTEEST---TSC--EECCT
T ss_pred eECCCCCCCCCCccCccccccccccccCCcCCCCCCCCCCEecCCCccccCCCCCeEeECcCCCcCC---Ccc--cCCCc
Confidence 4577888754211 11223455677888766 98889999 55678999999999998 895 47899
Q ss_pred CCCCCCCCCCeeecCCCCCCCCCCeeeCCCCcccCCCC
Q psy2457 73 CEPNPCGENAKCQPGYDKSGKDRPVCTCLPGYVGDALT 110 (189)
Q Consensus 73 c~~~~c~~~~~C~~~~~~~~~~~~~c~c~~g~~~~~~~ 110 (189)
|...+|...+.|++ ..+.|.|.|++||.|..+.
T Consensus 100 C~~~~C~~~~~C~~-----~~g~~~C~C~~G~~G~~c~ 132 (143)
T 4d90_A 100 CEVEPCKNGGICTD-----LVANYSCECPGEFMGRNCQ 132 (143)
T ss_dssp TTTCCSCTTCEEEE-----ETTEEEEECCTTCBSTTSC
T ss_pred CCCCCCCCCCEeEC-----CCCCeEeECCCCCccCCce
Confidence 99999999999987 5678999999999998743
No 13
>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens}
Probab=98.99 E-value=5.1e-10 Score=87.25 Aligned_cols=112 Identities=26% Similarity=0.740 Sum_probs=34.9
Q ss_pred chhhCCCCCEEeeCCCCeeeeCCCCCccCCCCCCcccCCCCCCCCCCCCCCCeeecCCCCCCCCCCeeeCCCCcccCCCC
Q psy2457 31 SDSQCGVNSECNVRNHIPVCSCPPGYTGDPLTQCRRFDPHDLCEPNPCGENAKCQPGYDKSGKDRPVCTCLPGYVGDALT 110 (189)
Q Consensus 31 c~~~C~~~~~C~~~~~~~~C~c~~g~~~~~~~~c~~~~~~~~c~~~~c~~~~~C~~~~~~~~~~~~~c~c~~g~~~~~~~ 110 (189)
|...|.+++.|.. .+.|.|.+||.|. .|+ ...|. .+|.+++.|.. .+.|.|.+||.|..++
T Consensus 183 C~~~C~~~G~C~~---~~~C~C~~G~~G~---~C~----~~~C~-~~C~~~G~C~~--------~~~C~C~~G~~G~~C~ 243 (324)
T 2ygq_A 183 CTPRCMNGGLCVT---PGFCICPPGFYGV---NCD----KANCS-TTCFNGGTCFY--------PGKCICPPGLEGEQCE 243 (324)
T ss_dssp SSSCCCTTCEECS---SCCEECCTTCBTT---TTC----BCCCS-SCCCSSCCBSC--------SSCBCCCTTCCTTTTC
T ss_pred CCCCCCCCCEEcC---CCEEeCCCCccCC---Ccc----cCcCC-CCCCCCCeeCC--------CCeeeCCCCccCCCCC
Confidence 4333655666654 3457777777766 663 13342 45666666653 2567777777766532
Q ss_pred cCccCCCCCCCCCCCCCccCC-Cee------------cCCccccCCCCCEeeeCCCCeeeeCCCCCccCCcc
Q psy2457 111 YCRRGECQSDAECNYDQVCNN-YNC------------EKACTSQCGINAQCTARNHVATCSCPAGYQGDALS 169 (189)
Q Consensus 111 ~c~~~~c~~~~~c~~~~~c~~-~~c------------~~~c~~~C~~~~~C~~~~g~~~C~C~~G~~g~~~~ 169 (189)
...|. ..|....+|.+ ++| ++.|...|.++++|.+ .+.|.|++||+|..+.
T Consensus 244 ---~~~C~--~~C~~~g~C~~~~~C~C~~G~~G~~C~~~~C~~~C~~~g~C~~---~~~C~C~~G~~G~~C~ 307 (324)
T 2ygq_A 244 ---ISKCP--QPCRNGGKCIGKSKCKCSKGYQGDLCSKPVCEPGCGAHGTCHE---PNKCQCQEGWHGRHCN 307 (324)
T ss_dssp ------------------------------------------------------------------------
T ss_pred ---cCcCC--CcCCCCCEECCCCEEECCCCCcCCCCcCCCCCCCCCCCCEECC---CCEeECCCCCcCCCCC
Confidence 22221 12222222221 222 2444445666677764 3577777777777753
No 14
>1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A
Probab=98.98 E-value=4.3e-10 Score=71.57 Aligned_cols=82 Identities=20% Similarity=0.389 Sum_probs=59.6
Q ss_pred CeeeeCCCCCccCCCCCCcccCCCCCCCCCCCCCCCeeecCCCCCCCCCCeeeCCCCcccCCCCcCccCCCCCCCCCCCC
Q psy2457 47 IPVCSCPPGYTGDPLTQCRRFDPHDLCEPNPCGENAKCQPGYDKSGKDRPVCTCLPGYVGDALTYCRRGECQSDAECNYD 126 (189)
Q Consensus 47 ~~~C~c~~g~~~~~~~~c~~~~~~~~c~~~~c~~~~~C~~~~~~~~~~~~~c~c~~g~~~~~~~~c~~~~c~~~~~c~~~ 126 (189)
+|.|.|.+||.+. .|+ +++|...||.+ ..+.|.|.|++||. . |+. .++
T Consensus 1 sy~C~C~~g~~g~---~c~----~~~c~~~pC~n-----------~~~~y~C~C~~G~~--~---C~~---~~~------ 48 (91)
T 1tpg_A 1 SYQVICRDEKTQM---IYQ----QHQSWLRPVLR-----------SNRVEYCWCNSGRA--Q---CHS---VPV------ 48 (91)
T ss_dssp CCCCCCBCSSSCC---BCC----SSCEEEEECSS-----------SSCEEEEECSSSCC--B---CCE---ECE------
T ss_pred CeeeECCCCCcCC---eEC----CCcccCCcccc-----------CCCCcEeECCCCCc--c---ccc---CcC------
Confidence 4789999999988 673 56666555543 33569999999996 2 220 022
Q ss_pred CccCCCeecCCccc-cCCCCCEeeeCC--CCeeeeCCCCCccCCcc
Q psy2457 127 QVCNNYNCEKACTS-QCGINAQCTARN--HVATCSCPAGYQGDALS 169 (189)
Q Consensus 127 ~~c~~~~c~~~c~~-~C~~~~~C~~~~--g~~~C~C~~G~~g~~~~ 169 (189)
++|.. +|.++++|++.. ++|.|.|++||+|..+.
T Consensus 49 ---------~~C~~~pC~ngg~C~~~~~~~~~~C~C~~G~~G~~Ce 85 (91)
T 1tpg_A 49 ---------KSCSEPRCFNGGTCQQALYFSDFVCQCPEGFAGKSCE 85 (91)
T ss_dssp ---------EECSSCCSCTTCEEEEESSSSCEEEECCTTCBSSSCC
T ss_pred ---------CcccCCCCCCCCEeecCCCCCCeEeECCCCCcCCcCC
Confidence 33333 688899999887 89999999999998864
No 15
>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A
Probab=98.95 E-value=1.9e-09 Score=67.20 Aligned_cols=76 Identities=24% Similarity=0.591 Sum_probs=55.0
Q ss_pred CCCCCCCC-CCCCCCCeeecCCCCCCCCCCeeeCCCCcccCCCCcCccCCCCCCCCCCCCCccCCCeecCCccccCCCCC
Q psy2457 68 DPHDLCEP-NPCGENAKCQPGYDKSGKDRPVCTCLPGYVGDALTYCRRGECQSDAECNYDQVCNNYNCEKACTSQCGINA 146 (189)
Q Consensus 68 ~~~~~c~~-~~c~~~~~C~~~~~~~~~~~~~c~c~~g~~~~~~~~c~~~~c~~~~~c~~~~~c~~~~c~~~c~~~C~~~~ 146 (189)
.++++|.. .+|.+ +.|++ ..++|.|.|++||.+... .|.++++|... .+|.+ +
T Consensus 3 ~dideC~~~~~C~~-g~C~n-----~~g~y~C~C~~Gy~~~g~------~C~dideC~~~-------------~~C~~-~ 56 (82)
T 1emn_A 3 VDMDECKEPDVCKH-GQCIN-----TDGSYRCECPFGYILAGN------ECVDTDECSVG-------------NPCGN-G 56 (82)
T ss_dssp CCCCSSSSTTSCSS-SEECC-----CSSCCCEECCTTEEEETT------EEEECCGGGTC-------------CTTSS-S
T ss_pred CccccCCCCCCcCC-CEEEe-----cCCCEEEECCCCeECCCC------ccCCcccccCC-------------CCCCC-C
Confidence 46788875 78865 79988 667899999999974321 24443333211 15765 6
Q ss_pred EeeeCCCCeeeeCCCCCccCCcc
Q psy2457 147 QCTARNHVATCSCPAGYQGDALS 169 (189)
Q Consensus 147 ~C~~~~g~~~C~C~~G~~g~~~~ 169 (189)
+|++..++|.|.|++||+|+...
T Consensus 57 ~C~n~~g~y~C~C~~G~~g~~~~ 79 (82)
T 1emn_A 57 TCKNVIGGFECTCEEGFEPGPMM 79 (82)
T ss_dssp CEEECSSSEEECCSSSSCCCSSS
T ss_pred EeECCCCCEEeECCCCeEeCCCC
Confidence 89999999999999999987643
No 16
>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A
Probab=98.94 E-value=7.1e-10 Score=69.14 Aligned_cols=73 Identities=26% Similarity=0.581 Sum_probs=59.1
Q ss_pred ccccccchh-h-CCCCCEEeeCCCCeeeeCCCCCccCCCCCCcccCCCCCCC-CCCCCCCCeeecCCCCCCCCCCeeeCC
Q psy2457 25 YLGIRLSDS-Q-CGVNSECNVRNHIPVCSCPPGYTGDPLTQCRRFDPHDLCE-PNPCGENAKCQPGYDKSGKDRPVCTCL 101 (189)
Q Consensus 25 c~~~~~c~~-~-C~~~~~C~~~~~~~~C~c~~g~~~~~~~~c~~~~~~~~c~-~~~c~~~~~C~~~~~~~~~~~~~c~c~ 101 (189)
|.++++|.. . |.+ +.|++..++|.|.|++||.+... .|+ ++++|. .++|.+ +.|.+ ..++|.|.|+
T Consensus 2 C~dideC~~~~~C~~-g~C~n~~g~y~C~C~~Gy~~~g~-~C~---dideC~~~~~C~~-~~C~n-----~~g~y~C~C~ 70 (82)
T 1emn_A 2 AVDMDECKEPDVCKH-GQCINTDGSYRCECPFGYILAGN-ECV---DTDECSVGNPCGN-GTCKN-----VIGGFECTCE 70 (82)
T ss_dssp CCCCCSSSSTTSCSS-SEECCCSSCCCEECCTTEEEETT-EEE---ECCGGGTCCTTSS-SCEEE-----CSSSEEECCS
T ss_pred CCccccCCCCCCcCC-CEEEecCCCEEEECCCCeECCCC-ccC---CcccccCCCCCCC-CEeEC-----CCCCEEeECC
Confidence 678899985 4 864 89999999999999999983221 784 678887 678875 58988 6678999999
Q ss_pred CCcccCC
Q psy2457 102 PGYVGDA 108 (189)
Q Consensus 102 ~g~~~~~ 108 (189)
+||.+..
T Consensus 71 ~G~~g~~ 77 (82)
T 1emn_A 71 EGFEPGP 77 (82)
T ss_dssp SSSCCCS
T ss_pred CCeEeCC
Confidence 9998764
No 17
>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A
Probab=98.92 E-value=8.2e-10 Score=78.33 Aligned_cols=135 Identities=21% Similarity=0.479 Sum_probs=84.2
Q ss_pred cCCCCCCCccCCCCcccCCCCccccccchhh--CCCCCEEeeCCCCeeeeCCCCCccCCCCCCcccCCCCCCCCCCCC-C
Q psy2457 4 KFPPRPGFEPSPSRLVASPRDYLGIRLSDSQ--CGVNSECNVRNHIPVCSCPPGYTGDPLTQCRRFDPHDLCEPNPCG-E 80 (189)
Q Consensus 4 ~~~~~~gf~~~~~~~~~~~~~c~~~~~c~~~--C~~~~~C~~~~~~~~C~c~~g~~~~~~~~c~~~~~~~~c~~~~c~-~ 80 (189)
...|.+||.+. . |.. .|... |..+++|.. ...|.|.+||.+. .|+ ...|. ..|. .
T Consensus 18 ~c~C~~g~~G~-----~----C~~--~C~~~~~c~~~g~C~~---~g~C~C~~G~~G~---~C~----~~~C~-~~C~~~ 75 (169)
T 2vj2_A 18 AVTCDDYYYGF-----G----CNK--FCRPRDDFFGHYACDQ---NGNKTCMEGWMGP---ECN----RAICR-QGCSPK 75 (169)
T ss_dssp ---CCTTEETT-----T----TCE--ECCCEEETTEEEEECS---SCCEEECTTEEST---TSC----EECCC-TTCCTT
T ss_pred eeeCCCcCcCC-----C----ccc--ccCCCCCcCCCCEeCC---CCeeECCCCCcCC---CCC----CCCCC-CCCCCC
Confidence 45688888765 1 221 23322 555567753 3479999999988 784 23453 3454 4
Q ss_pred CCeeecCCCCCCCCCCeeeCCCCcccCCCCcCccCC-CCCCCCCCCCCcc--CC----Cee---cCCccc--cCCCCCEe
Q psy2457 81 NAKCQPGYDKSGKDRPVCTCLPGYVGDALTYCRRGE-CQSDAECNYDQVC--NN----YNC---EKACTS--QCGINAQC 148 (189)
Q Consensus 81 ~~~C~~~~~~~~~~~~~c~c~~g~~~~~~~~c~~~~-c~~~~~c~~~~~c--~~----~~c---~~~c~~--~C~~~~~C 148 (189)
.+.|.. .+.|.|.+||.|..+++|...+ |.+. .|....+| .. ..| +++|.. +|.++++|
T Consensus 76 ~g~C~~--------~~~C~C~~G~~G~~C~~C~~~~~C~~g-~C~~~~~C~C~~G~~G~~C~~~~~~C~~~~~C~~~g~C 146 (169)
T 2vj2_A 76 HGSCKL--------PGDCRCQYGWQGLYCDKCIPHPGCVHG-ICNEPWQCLCETNWGGQLCDKDLNYCGTHQPCLNGGTC 146 (169)
T ss_dssp TEECSS--------TTCCEECTTEESSSSCEECCCTTCSSE-ECSSTTCCEECTTEETTTTCEESCHHHHTCCCCTTCEE
T ss_pred CcccCC--------CCeeECCCCCCCCCcccCCCCCCCCCC-CcCCCCEEeCCCCCCCCcccCCCCCCCCCCCCCCCCEE
Confidence 456754 4789999999998876554333 4432 33321111 11 112 566753 79999999
Q ss_pred eeC-CCCeeeeCCCCCccCCcc
Q psy2457 149 TAR-NHVATCSCPAGYQGDALS 169 (189)
Q Consensus 149 ~~~-~g~~~C~C~~G~~g~~~~ 169 (189)
++. .++|.|.|++||+|..+.
T Consensus 147 ~~~~~~~~~C~C~~G~~G~~Ce 168 (169)
T 2vj2_A 147 SNTGPDKYQCSCPEGYSGPNCE 168 (169)
T ss_dssp EECSTTCEEEECCTTCCSTTSC
T ss_pred cCCCCCCcEeECCCCCcCcCcC
Confidence 996 789999999999998853
No 18
>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens}
Probab=98.90 E-value=1.8e-10 Score=79.81 Aligned_cols=115 Identities=24% Similarity=0.435 Sum_probs=68.4
Q ss_pred cccccchhh-CCCCCEEeeCCCCeeeeCCCCCccCCC-CCCcccCCCC---------CCCC--CCCCCCCeeecCCCCCC
Q psy2457 26 LGIRLSDSQ-CGVNSECNVRNHIPVCSCPPGYTGDPL-TQCRRFDPHD---------LCEP--NPCGENAKCQPGYDKSG 92 (189)
Q Consensus 26 ~~~~~c~~~-C~~~~~C~~~~~~~~C~c~~g~~~~~~-~~c~~~~~~~---------~c~~--~~c~~~~~C~~~~~~~~ 92 (189)
.++++|... |.+ ++|++..++|+|.|++||.+... ..|.. .... .|.. ..|.....|.+ .
T Consensus 2 ~dideC~~~pC~n-g~C~n~~g~y~C~C~~G~~g~~~~~~C~~-~~~~~C~~~~~g~~C~~~~~~c~~~~~C~~-----~ 74 (147)
T 2w86_A 2 ADIDECESSPCIN-GVCKNSPGSFICECSSESTLDPTKTICIE-TIKGTCWQTVIDGRCEININGATLKSQCCS-----S 74 (147)
T ss_dssp CCCCGGGGCCSBT-SEEEEETTEEEEECCTTEEECTTSSBEEE-CCCEEEEEEEETTEEEEEEEEEECHHHHHT-----T
T ss_pred CcCccCcCCCCCC-CEeECCCCCEEeECCCCcccCCCCCeecC-CCCCcccCCCCCCccccCCCccccCCcccc-----C
Confidence 467888876 875 79999999999999999997621 12320 0000 0100 00100001111 1
Q ss_pred CC----------CCeeeCCCCcccCCCCcCccCCCCCCCCCCCCCccCCCeecCCccc---cCCCCCEeeeCCCCeeeeC
Q psy2457 93 KD----------RPVCTCLPGYVGDALTYCRRGECQSDAECNYDQVCNNYNCEKACTS---QCGINAQCTARNHVATCSC 159 (189)
Q Consensus 93 ~~----------~~~c~c~~g~~~~~~~~c~~~~c~~~~~c~~~~~c~~~~c~~~c~~---~C~~~~~C~~~~g~~~C~C 159 (189)
.+ .+.|.|++||.+..- ..|.+ ||+|.. +|.+ ++|++..++|+|.|
T Consensus 75 ~g~~~g~~C~~c~~~C~C~~Gy~~~~g-----~~C~d---------------ideC~~~~~~C~~-g~C~n~~g~y~C~C 133 (147)
T 2w86_A 75 LGAAWGSPCTLCQVDPICGKGYSRIKG-----TQCED---------------IDECEVFPGVCKN-GLCVNTRGSFKCQC 133 (147)
T ss_dssp TCSEETTTTEECCCCTTTCTTEEEEET-----TEEEE---------------CCHHHHSTTCSSS-SEEEEETTEEEEEC
T ss_pred cCcccCCCcccCCCcccCCCccccCCC-----CccCc---------------cccccCCCCCCCC-CEEECCCCCEEeeC
Confidence 11 156788888853110 11333 344543 4875 59999999999999
Q ss_pred CCCCccCCc
Q psy2457 160 PAGYQGDAL 168 (189)
Q Consensus 160 ~~G~~g~~~ 168 (189)
++||+|+..
T Consensus 134 ~~Gy~g~~~ 142 (147)
T 2w86_A 134 PSGMTLDAT 142 (147)
T ss_dssp CTTCCBCTT
T ss_pred CCCCccCCC
Confidence 999997764
No 19
>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A*
Probab=98.82 E-value=6.4e-09 Score=87.16 Aligned_cols=88 Identities=26% Similarity=0.515 Sum_probs=70.2
Q ss_pred CCCCCCccCCCCcccCCCCccccccchhh---CCCCC---EEeeCCCCeeee-CCCCCccCCC------------CCCcc
Q psy2457 6 PPRPGFEPSPSRLVASPRDYLGIRLSDSQ---CGVNS---ECNVRNHIPVCS-CPPGYTGDPL------------TQCRR 66 (189)
Q Consensus 6 ~~~~gf~~~~~~~~~~~~~c~~~~~c~~~---C~~~~---~C~~~~~~~~C~-c~~g~~~~~~------------~~c~~ 66 (189)
.|.+||.+ .+..|.++++|... |.+++ +|++..++|.|. |++||.+... ..|
T Consensus 29 ~C~~GytG-------dg~~CeDiDEC~~~p~~C~~gg~~~~CvNt~gsY~C~~C~~Gy~G~~c~g~g~~~~~~dg~~C-- 99 (634)
T 1yo8_A 29 FCPVGFLG-------NGTHCEDLDECALVPDICFSTSKVPRCVNTQPGFHCLPCPPRYRGNQPVGVGLEAAKTEKQVC-- 99 (634)
T ss_dssp CCCTTBCS-------CSSSCCBCCTTTTSCCCSCCCSSSCCEEECSSSEEECCCCTTEEECCCEESSSHHHHSCCCCE--
T ss_pred cCCCccCC-------CCCCccccccccCCCCcccCCccccceeeccCceecccCCCCcccCccccccccccccCCCcc--
Confidence 67788863 34678999999865 98888 899999999998 9999997721 125
Q ss_pred cCCCCCCCC--CCCCCCCeeecCCCCCCC----CCCeeeCCCCcccCC
Q psy2457 67 FDPHDLCEP--NPCGENAKCQPGYDKSGK----DRPVCTCLPGYVGDA 108 (189)
Q Consensus 67 ~~~~~~c~~--~~c~~~~~C~~~~~~~~~----~~~~c~c~~g~~~~~ 108 (189)
..+++|.. .+|...+.|++ .. ++|.|.|++||.+..
T Consensus 100 -~dideC~~~~~pC~~~~~Cvn-----t~~~~~GsY~C~C~~Gy~GdG 141 (634)
T 1yo8_A 100 -EPENPCKDKTHNCHKHAECIY-----LGHFSDPMYKCECQTGYAGDG 141 (634)
T ss_dssp -EECCTTTTTCCCCCTTEEEEE-----CCTTCSSSEEEEECTTEEESS
T ss_pred -cccccccCCCcccccCccccc-----cccccccceeeeccCCccccC
Confidence 35788974 58998899998 44 789999999999854
No 20
>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L*
Probab=98.80 E-value=5.9e-09 Score=72.08 Aligned_cols=70 Identities=21% Similarity=0.577 Sum_probs=53.8
Q ss_pred Cccccccchhh-CCCCCEEeeCCCCeeeeCCCCCccCCCCCCcccCCCCCCCCC--CCCCCCee-ecCCCCCCCCCCeee
Q psy2457 24 DYLGIRLSDSQ-CGVNSECNVRNHIPVCSCPPGYTGDPLTQCRRFDPHDLCEPN--PCGENAKC-QPGYDKSGKDRPVCT 99 (189)
Q Consensus 24 ~c~~~~~c~~~-C~~~~~C~~~~~~~~C~c~~g~~~~~~~~c~~~~~~~~c~~~--~c~~~~~C-~~~~~~~~~~~~~c~ 99 (189)
.|.++++|... |.++++|++..++|.|.|++||.|. .|+ .+++|... +|.. .| .+ ..++|.|.
T Consensus 44 ~c~dideC~~~pC~n~g~C~~~~~~y~C~C~~G~~G~---~C~---~~deC~~~~~~C~~--~C~~n-----~~g~y~C~ 110 (146)
T 1x7a_L 44 QYVDGDQCEPNPCLNGGLCKDDINSYECWCQVGFEGK---NCE---LDATCNIKNGRCKQ--FCKTG-----ADSKVLCS 110 (146)
T ss_dssp ------CCSSCSSCTTCEEEECSSCEEEECCSSEEST---TTC---EECCTTSGGGSCSS--BCCCC-----SSSCCCCB
T ss_pred cCCCcCcCCCCCCCCCCEeECCCCCEEEecCCCCcCC---cCC---CCccccCCCCCCcC--CCCCC-----CCCCEEeE
Confidence 58899999877 9999999999999999999999998 895 45888754 4544 78 76 56789999
Q ss_pred CCCCccc
Q psy2457 100 CLPGYVG 106 (189)
Q Consensus 100 c~~g~~~ 106 (189)
|++||.+
T Consensus 111 C~~Gy~l 117 (146)
T 1x7a_L 111 CTTGYRL 117 (146)
T ss_dssp CCTTEEE
T ss_pred cCCCcEe
Confidence 9999984
No 21
>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens}
Probab=98.79 E-value=9.1e-09 Score=80.20 Aligned_cols=108 Identities=31% Similarity=0.823 Sum_probs=51.4
Q ss_pred CCCCCEEeeCCCCeeeeCCCCCccCCCCCCcccCCCCCCCCCCCCCCCeeecCCCCCCCCCCeeeCCCCcccCCCCcCcc
Q psy2457 35 CGVNSECNVRNHIPVCSCPPGYTGDPLTQCRRFDPHDLCEPNPCGENAKCQPGYDKSGKDRPVCTCLPGYVGDALTYCRR 114 (189)
Q Consensus 35 C~~~~~C~~~~~~~~C~c~~g~~~~~~~~c~~~~~~~~c~~~~c~~~~~C~~~~~~~~~~~~~c~c~~g~~~~~~~~c~~ 114 (189)
|.+++.|.. .+.|.|.+||.|. .|+ .+.|. .+|.+++.|.. .+.|.|.+||.|..++ .
T Consensus 155 C~~~G~C~~---~~~C~C~~G~~G~---~C~----~~~C~-~~C~~~G~C~~--------~~~C~C~~G~~G~~C~---~ 212 (324)
T 2ygq_A 155 CRNGGFCNE---RRICECPDGFHGP---HCE----KALCT-PRCMNGGLCVT--------PGFCICPPGFYGVNCD---K 212 (324)
T ss_dssp CCSSCEECT---TSCEECCTTEESS---SSC----EESSS-SCCCTTCEECS--------SCCEECCTTCBTTTTC---B
T ss_pred CCCCCEECC---CCeEECCCCCcCC---CCC----CCCCC-CCCCCCCEEcC--------CCEEeCCCCccCCCcc---c
Confidence 778888864 4789999999998 885 24564 57888899975 4789999999998743 2
Q ss_pred CCCCCCCCCCCCCccCC-Cee------------cCCccccCCCCCEeeeCCCCeeeeCCCCCccCCcc
Q psy2457 115 GECQSDAECNYDQVCNN-YNC------------EKACTSQCGINAQCTARNHVATCSCPAGYQGDALS 169 (189)
Q Consensus 115 ~~c~~~~~c~~~~~c~~-~~c------------~~~c~~~C~~~~~C~~~~g~~~C~C~~G~~g~~~~ 169 (189)
..|. ..|..+.+|.+ ++| +++|..+|.++++|.. .+.|.|++||+|..+.
T Consensus 213 ~~C~--~~C~~~G~C~~~~~C~C~~G~~G~~C~~~~C~~~C~~~g~C~~---~~~C~C~~G~~G~~C~ 275 (324)
T 2ygq_A 213 ANCS--TTCFNGGTCFYPGKCICPPGLEGEQCEISKCPQPCRNGGKCIG---KSKCKCSKGYQGDLCS 275 (324)
T ss_dssp CCCS--SCCCSSCCBSCSSCBCCCTTCCTTTTC-----------------------------------
T ss_pred CcCC--CCCCCCCeeCCCCeeeCCCCccCCCCCcCcCCCcCCCCCEECC---CCEEECCCCCcCCCCc
Confidence 2232 13333333332 333 3455557888889974 4789999999998864
No 22
>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L*
Probab=98.78 E-value=1e-09 Score=79.22 Aligned_cols=70 Identities=24% Similarity=0.652 Sum_probs=22.0
Q ss_pred Cccccccchhh-CCCCCEEeeCCCCeeeeCCCCCccCCCCCCcccCCC-CCCCCC--CCCCCCeeecCCCCCCCCCCeee
Q psy2457 24 DYLGIRLSDSQ-CGVNSECNVRNHIPVCSCPPGYTGDPLTQCRRFDPH-DLCEPN--PCGENAKCQPGYDKSGKDRPVCT 99 (189)
Q Consensus 24 ~c~~~~~c~~~-C~~~~~C~~~~~~~~C~c~~g~~~~~~~~c~~~~~~-~~c~~~--~c~~~~~C~~~~~~~~~~~~~c~ 99 (189)
.|.++++|... |.++++|++..++|.|.|++||.|. .|+ ..+ ++|... +|.. .|.+ ..++|.|.
T Consensus 38 ~c~dideC~~~pC~ngg~C~n~~g~y~C~C~~Gf~G~---~Ce--~~i~deC~~~~~~C~~--~C~n-----~~gsy~C~ 105 (195)
T 1nfu_B 38 KYKDGDQCETSPCQNQGKCKDGLGEYTCTCLEGFEGK---NCE--LFTRKLCSLDNGDCDQ--FCHE-----EQNSVVCS 105 (195)
T ss_dssp ------------------------------------------------CCGGGTGGGGCSS--EEEE-----ETTEEEEE
T ss_pred cCCCCcccCCCCCCCCCEeECCCCCeeEeCCCCceec---ccc--ccccccccCCCCCCCC--EeEC-----CCCCeEEE
Confidence 48899999877 9998999999999999999999998 896 345 778753 4654 8987 56789999
Q ss_pred CCCCcc
Q psy2457 100 CLPGYV 105 (189)
Q Consensus 100 c~~g~~ 105 (189)
|++||.
T Consensus 106 C~~Gy~ 111 (195)
T 1nfu_B 106 CARGYT 111 (195)
T ss_dssp CCTTEE
T ss_pred CCCCce
Confidence 999998
No 23
>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L*
Probab=98.78 E-value=6.1e-09 Score=72.00 Aligned_cols=83 Identities=34% Similarity=0.733 Sum_probs=57.2
Q ss_pred CCCCCCCCCCCCCCCeeecCCCCCCCCCCeeeCCCCcccCCCCcCccCCCCCCCCCCCCCccCCCeecCCccccCCCCCE
Q psy2457 68 DPHDLCEPNPCGENAKCQPGYDKSGKDRPVCTCLPGYVGDALTYCRRGECQSDAECNYDQVCNNYNCEKACTSQCGINAQ 147 (189)
Q Consensus 68 ~~~~~c~~~~c~~~~~C~~~~~~~~~~~~~c~c~~g~~~~~~~~c~~~~c~~~~~c~~~~~c~~~~c~~~c~~~C~~~~~ 147 (189)
.++++|..+||.++++|++ ..++|.|.|++||.|.. |.++++|.... ..|.+ +
T Consensus 46 ~dideC~~~pC~n~g~C~~-----~~~~y~C~C~~G~~G~~--------C~~~deC~~~~------------~~C~~--~ 98 (146)
T 1x7a_L 46 VDGDQCEPNPCLNGGLCKD-----DINSYECWCQVGFEGKN--------CELDATCNIKN------------GRCKQ--F 98 (146)
T ss_dssp ----CCSSCSSCTTCEEEE-----CSSCEEEECCSSEESTT--------TCEECCTTSGG------------GSCSS--B
T ss_pred CCcCcCCCCCCCCCCEeEC-----CCCCEEEecCCCCcCCc--------CCCCccccCCC------------CCCcC--C
Confidence 4788999999999999998 56789999999999875 33333343210 03554 7
Q ss_pred e-eeCCCCeeeeCCCCCccCCc-ccCeecCCc
Q psy2457 148 C-TARNHVATCSCPAGYQGDAL-SRCYPAETT 177 (189)
Q Consensus 148 C-~~~~g~~~C~C~~G~~g~~~-~~c~~~~~~ 177 (189)
| ++..++|.|.|++||++... ..|.++..+
T Consensus 99 C~~n~~g~y~C~C~~Gy~l~~dG~~C~~~~~~ 130 (146)
T 1x7a_L 99 CKTGADSKVLCSCTTGYRLAPDQKSCKPAVPF 130 (146)
T ss_dssp CCCCSSSCCCCBCCTTEEECTTSSSEEECSSS
T ss_pred CCCCCCCCEEeEcCCCcEeCCCCCcCCCCCCC
Confidence 9 88999999999999993221 237776554
No 24
>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1
Probab=98.77 E-value=5.8e-09 Score=65.57 Aligned_cols=75 Identities=25% Similarity=0.608 Sum_probs=52.7
Q ss_pred CCCCCCCCC--CCCCCeeecCCCCCCCCCCeeeCCCCcccCCCCcCccCCCCCCCCCCCCCccCCCeecCCccc-c--CC
Q psy2457 69 PHDLCEPNP--CGENAKCQPGYDKSGKDRPVCTCLPGYVGDALTYCRRGECQSDAECNYDQVCNNYNCEKACTS-Q--CG 143 (189)
Q Consensus 69 ~~~~c~~~~--c~~~~~C~~~~~~~~~~~~~c~c~~g~~~~~~~~c~~~~c~~~~~c~~~~~c~~~~c~~~c~~-~--C~ 143 (189)
++++|...+ |.+ +.|++ ..++|.|.|++||.+.... ...|.+ +|+|.. + |.
T Consensus 2 dideC~~~~~~C~~-g~C~n-----~~g~y~C~C~~Gy~~~~~~---g~~C~d---------------ideC~~~~~~C~ 57 (86)
T 1lmj_A 2 DIDECRISPDLCGR-GQCVN-----TPGDFECKCDEGYESGFMM---MKNCMD---------------IDECQRDPLLCR 57 (86)
T ss_dssp CCCTTTTCSSTTTT-SCEEE-----ETTEEEECCCSSEEECTTT---SSSEEE---------------CCHHHHCSSTTT
T ss_pred ccccccCCCCCCCC-CEEEC-----CCCCEEeeCCCCcCccCCC---CCccCC---------------cccccCCCCcCC
Confidence 467887655 854 48988 6678999999999854210 012334 344543 3 65
Q ss_pred CCCEeeeCCCCeeeeCCCCCccCCc
Q psy2457 144 INAQCTARNHVATCSCPAGYQGDAL 168 (189)
Q Consensus 144 ~~~~C~~~~g~~~C~C~~G~~g~~~ 168 (189)
+++|++..++|.|.|++||++...
T Consensus 58 -~~~C~n~~g~y~C~C~~G~~~~~~ 81 (86)
T 1lmj_A 58 -GGVCHNTEGSYRCECPPGHQLSPN 81 (86)
T ss_dssp -TSEEEEETTEEEEESCTTSCCCSS
T ss_pred -CCEeEcCCCCEEEECcCCcccCCC
Confidence 479999999999999999997653
No 25
>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L*
Probab=98.76 E-value=1.9e-08 Score=66.56 Aligned_cols=86 Identities=27% Similarity=0.505 Sum_probs=56.8
Q ss_pred CCCCCCCCC--------CCCCCeeecCCCCCCCCCCeeeCCCCcccCCCCcCccCCCCCCCCCCCCCccCCCeecCCccc
Q psy2457 69 PHDLCEPNP--------CGENAKCQPGYDKSGKDRPVCTCLPGYVGDALTYCRRGECQSDAECNYDQVCNNYNCEKACTS 140 (189)
Q Consensus 69 ~~~~c~~~~--------c~~~~~C~~~~~~~~~~~~~c~c~~g~~~~~~~~c~~~~c~~~~~c~~~~~c~~~~c~~~c~~ 140 (189)
++++|...| |.++++|++ ..++|.|.|++||.|..+.... +.++|.... .
T Consensus 5 d~d~C~~~p~~~~C~~~C~~~g~C~~-----~~~~y~C~C~~G~~G~~C~~~~-----~~~~C~~~~------------~ 62 (114)
T 1aut_L 5 DGDQCLVLPLEHPCASLCCGHGTCID-----GIGSFSCDCRSGWEGRFCQREV-----SFLNCSLDN------------G 62 (114)
T ss_dssp ---CCCCCSSCCSSSSTTTTSEEECC-----CSSCCCEEECTTEESTTSCEEC-----CSSSSSSGG------------G
T ss_pred ecccccCCCccccccccCCCcCCCCC-----CCCCcEeeCCCCCcCCCcCcCC-----cCCcCcCCC------------C
Confidence 456777666 888899987 5678999999999988633100 011222100 0
Q ss_pred cCCCCCEeeeCCCCeeeeCCCCCccCCc-ccCeecCCcc
Q psy2457 141 QCGINAQCTARNHVATCSCPAGYQGDAL-SRCYPAETTS 178 (189)
Q Consensus 141 ~C~~~~~C~~~~g~~~C~C~~G~~g~~~-~~c~~~~~~~ 178 (189)
.|.. +|++..++|.|.|++||++... .+|.++..++
T Consensus 63 ~C~~--~C~n~~g~y~C~C~~G~~~~~~g~~C~~~~~~p 99 (114)
T 1aut_L 63 GCTH--YCLEEVGWRRCSCAPGYKLGDDLLQCHPAVKFP 99 (114)
T ss_dssp GCSS--EEEECSSSEEEECCTTEEECTTSSCEEECSSSC
T ss_pred CCCC--EeECCCCCEEeECCCCeeECCCCCccCcCcccC
Confidence 3543 8999999999999999996543 4477766654
No 26
>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 4g1e_B* 3ije_B* 4g1m_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B*
Probab=98.74 E-value=2.2e-08 Score=84.99 Aligned_cols=123 Identities=28% Similarity=0.670 Sum_probs=86.3
Q ss_pred cchhh-CCCCCEEeeCCCCee---eeCCCCCccCCCCCCcccCCC--------CCCCC----CCCCCCCeeecCCCCCCC
Q psy2457 30 LSDSQ-CGVNSECNVRNHIPV---CSCPPGYTGDPLTQCRRFDPH--------DLCEP----NPCGENAKCQPGYDKSGK 93 (189)
Q Consensus 30 ~c~~~-C~~~~~C~~~~~~~~---C~c~~g~~~~~~~~c~~~~~~--------~~c~~----~~c~~~~~C~~~~~~~~~ 93 (189)
+|... |.+.+.|.+..|.+. |.|.+||.|. .|+ ..+ +.|.. .+|.+.+.|..
T Consensus 436 ~C~~~pc~n~~~C~~g~G~~~~G~C~C~~Gy~G~---~Ce--~~~~~~~~~~~~~C~~~~~~~~Cs~~G~C~~------- 503 (690)
T 3fcs_B 436 ACQAQAEPNSHRCNNGNGTFECGVCRCGPGWLGS---QCE--CSEEDYRPSQQDECSPREGQPVCSQRGECLC------- 503 (690)
T ss_dssp GGGTTCCTTCTTTTTTSEEEETTEEEECTTCCSS---SSC--CSCC------CCCCSSSSSSCGGGGSEEECS-------
T ss_pred CCcCCCCCCCCcccCCCCeEeCCceEeCCCccCC---cee--eccCccCCccCCcCCCCCCCCCCCCCCEEEC-------
Confidence 45444 666677776666676 9999999999 885 333 55764 34777888864
Q ss_pred CCCeeeCC----CCcccCCCCcCccCCCCC--CCCCCCCCccCCCee----------------cCCccc----cCCCCCE
Q psy2457 94 DRPVCTCL----PGYVGDALTYCRRGECQS--DAECNYDQVCNNYNC----------------EKACTS----QCGINAQ 147 (189)
Q Consensus 94 ~~~~c~c~----~g~~~~~~~~c~~~~c~~--~~~c~~~~~c~~~~c----------------~~~c~~----~C~~~~~ 147 (189)
+.|.|. +||.|..++ +....|.. ...|..+.+|.++.| +++|.. +|.++|+
T Consensus 504 --g~C~C~~~~~~Gy~G~~Ce-~~~~~C~~~~~~~C~~~G~C~~g~C~C~~Gy~G~~CeC~~~~~~C~~~~g~~C~~~G~ 580 (690)
T 3fcs_B 504 --GQCVCHSSDFGKITGKYCE-CDDFSCVRYKGEMCSGHGQCSCGDCLCDSDWTGYYCNCTTRTDTCMSSNGLLCSGRGK 580 (690)
T ss_dssp --SSEEECCCSSCCCBSTTSC-BCSSCCCBSSSSBGGGSEEEETTEEEECTTEESSSSCEECCCTTTBCTTSSBTSSSCE
T ss_pred --CeeEeecCCCCCeeCCCcC-cccCcCcCCCCCCCCCCCEecCCeeECcCCCcCCCCccCCCCCcccCCCCCCCCCCCE
Confidence 689999 999998864 23345552 234655666666665 345652 5888999
Q ss_pred eeeCCCCeeeeC-CCCCccCCcccC
Q psy2457 148 CTARNHVATCSC-PAGYQGDALSRC 171 (189)
Q Consensus 148 C~~~~g~~~C~C-~~G~~g~~~~~c 171 (189)
|.+. .|.| ++||+|..|..|
T Consensus 581 C~~g----~C~C~~~Gy~G~~Ce~C 601 (690)
T 3fcs_B 581 CECG----SCVCIQPGSYGDTCEKC 601 (690)
T ss_dssp EETT----EEECCSTTCBSTTSCBC
T ss_pred EeCC----EEECCCCCccCCCcCcC
Confidence 9752 8999 999999998643
No 27
>4fbr_A Lectin, myxobacterial hemagglutinin; beta-barrel, HIV-inactivating, carbohydrate binding protein; 1.60A {Myxococcus xanthus} PDB: 4fbv_A*
Probab=98.71 E-value=4.9e-11 Score=89.58 Aligned_cols=135 Identities=11% Similarity=-0.001 Sum_probs=87.8
Q ss_pred CCCCccccccchhh-CCCCCEEeeCCCCeeeeCCCCCccCCCCCCcccCCCCC------CCC------------------
Q psy2457 21 SPRDYLGIRLSDSQ-CGVNSECNVRNHIPVCSCPPGYTGDPLTQCRRFDPHDL------CEP------------------ 75 (189)
Q Consensus 21 ~~~~c~~~~~c~~~-C~~~~~C~~~~~~~~C~c~~g~~~~~~~~c~~~~~~~~------c~~------------------ 75 (189)
.+..|...++|+.. |.+.++|++...+|.|.|+.||++. .|+ ..+++ +..
T Consensus 92 ~G~~c~~~~eC~s~pC~ngG~C~~~~~sy~C~C~~Gf~G~---~Ce--~~~d~C~n~~~c~s~pC~ngg~c~~G~~c~~~ 166 (267)
T 4fbr_A 92 LGARDKQNIVAVSIKSNDGGKTLTGTTTYNGEGPIGFKSE---VTD--GDTYSVENQWGGSAAPWHSGGVWVLGTRGKQN 166 (267)
T ss_dssp CCCCSSCCEEEEEEECSSTTSEEEEEEEETTSCCEEEEEE---ECC--CCEEEEEEECSSTTSCCEEEEEEECCSSTTSC
T ss_pred ccCccccccccCCCCCCCCCEEecCCccEEeeCCCCcccc---CCC--CCcccccccCCcCCccccCCcceecccccccc
Confidence 34567777788877 9999999999899999999999987 665 33333 222
Q ss_pred -----CCCCCCCeeecCCCCCCCCCCeeeCCCCcccCCCCcCccCCCC-----CCCCCCCCCc----cCCCeecCCcccc
Q psy2457 76 -----NPCGENAKCQPGYDKSGKDRPVCTCLPGYVGDALTYCRRGECQ-----SDAECNYDQV----CNNYNCEKACTSQ 141 (189)
Q Consensus 76 -----~~c~~~~~C~~~~~~~~~~~~~c~c~~g~~~~~~~~c~~~~c~-----~~~~c~~~~~----c~~~~c~~~c~~~ 141 (189)
.+|.+.++|++ ...+|+|.|++||.|..+.. .++.|. ....|..... |....-++.|..+
T Consensus 167 i~c~~~~c~ngg~C~d-----g~~~y~C~Cp~Gf~G~~c~~-~i~ec~~~~~c~~~~c~~gG~~~~~C~~g~n~~~c~~~ 240 (267)
T 4fbr_A 167 VINVDAKSNDGGKTLS-----GTMTYNGEGPIGFRGTLTSP-DTYTVENQWGGSTAPWNPGGFWMIGARNGQNVVALNVA 240 (267)
T ss_dssp EEEEEEECSSTTSEEE-----EEEEETTSCCEEEEEEEEET-TEEEEEEECSCTTSCCEEEEEEECCCCTTCCEEEEEEE
T ss_pred cccCCCCCCCCCEeeC-----CCCCeEEeCCCCcccccccc-ccceeccCCCccCCcccCCCeEEEecCCCCccccCCcC
Confidence 23556667765 45679999999999876321 011111 1111111110 0001113344447
Q ss_pred CCCCCEeeeCCCCeeeeCCCCCccC
Q psy2457 142 CGINAQCTARNHVATCSCPAGYQGD 166 (189)
Q Consensus 142 C~~~~~C~~~~g~~~C~C~~G~~g~ 166 (189)
|.++++|++...+|.|.||+||+|.
T Consensus 241 c~ngGtC~dg~~sy~CeCp~GF~G~ 265 (267)
T 4fbr_A 241 SSDGGKTLAGTMIYNGEGPIGFRAR 265 (267)
T ss_dssp CSSTTSEEEEEEEETTSCCEEEEEE
T ss_pred CCCCCEeeCCCcceeecCCCCcccc
Confidence 9999999998899999999999874
No 28
>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ...
Probab=98.70 E-value=1.5e-08 Score=69.75 Aligned_cols=73 Identities=21% Similarity=0.433 Sum_probs=56.7
Q ss_pred Cccccccchhh-CCCCCEEeeCCCCeeeeCCCCCccCCCCCCcccCCCCCCCCCCCCCCC---eeecCCCCCCCC-CCee
Q psy2457 24 DYLGIRLSDSQ-CGVNSECNVRNHIPVCSCPPGYTGDPLTQCRRFDPHDLCEPNPCGENA---KCQPGYDKSGKD-RPVC 98 (189)
Q Consensus 24 ~c~~~~~c~~~-C~~~~~C~~~~~~~~C~c~~g~~~~~~~~c~~~~~~~~c~~~~c~~~~---~C~~~~~~~~~~-~~~c 98 (189)
.+.++++|... |.++++|++..++|.|.|++||.|. .|+ ..++++...++..++ .|.+ ..+ +|.|
T Consensus 43 ~c~did~C~~~pC~n~g~C~~~~g~y~C~C~~G~~G~---~C~--~~~~~c~~c~~~~~~C~~~C~~-----~~g~~y~C 112 (142)
T 2c4f_L 43 SYSDGDQCASSPCQNGGSCKDQLQSYICFCLPAFEGR---NCE--THKDDQLICVNENGGCEQYCSD-----HTGTKRSC 112 (142)
T ss_dssp HHTTCCGGGGCCCCTTCEEEEETTEEEEECCTTEEST---TSC--EEGGGCCSTTTGGGGCSSEEEC-----CTTSCCEE
T ss_pred cCCccCcCcCCCcCCCCEEeCCCCCEEeeCCCCccCC---ccc--cCccccccccCCCCCccCEeEC-----CCCCCEEE
Confidence 36788999877 9999999999999999999999998 885 234554333333333 7887 556 8999
Q ss_pred eCCCCccc
Q psy2457 99 TCLPGYVG 106 (189)
Q Consensus 99 ~c~~g~~~ 106 (189)
.|++||.+
T Consensus 113 ~C~~Gy~l 120 (142)
T 2c4f_L 113 RCHEGYSL 120 (142)
T ss_dssp ECCTTEEE
T ss_pred ECCCCceE
Confidence 99999983
No 29
>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens}
Probab=98.69 E-value=1.7e-08 Score=63.54 Aligned_cols=69 Identities=26% Similarity=0.625 Sum_probs=48.9
Q ss_pred CCCCCCCCC--CCCCCeeecCCCCCCCCCCeeeCCCCcccCCCCcCccCCCCCCCCCCCCCccCCCeecCCccc-cCCCC
Q psy2457 69 PHDLCEPNP--CGENAKCQPGYDKSGKDRPVCTCLPGYVGDALTYCRRGECQSDAECNYDQVCNNYNCEKACTS-QCGIN 145 (189)
Q Consensus 69 ~~~~c~~~~--c~~~~~C~~~~~~~~~~~~~c~c~~g~~~~~~~~c~~~~c~~~~~c~~~~~c~~~~c~~~c~~-~C~~~ 145 (189)
++++|...+ | ..+.|.+ ..++|.|.|++||.+.... ..|.+ +|+|.. +|.
T Consensus 2 dideC~~~~~~C-~~~~C~n-----~~g~y~C~C~~G~~~~~~g----~~C~d---------------ideC~~~~C~-- 54 (87)
T 1z6c_A 2 DVDECSLKPSIC-GTAVCKN-----IPGDFECECPEGYRYNLKS----KSCED---------------IDECSENMCA-- 54 (87)
T ss_dssp CSCSSSSSSSSB-TTSSCCC-----BTTBCCCSSSTTCEEETTT----TEEEC---------------CCHHHHSCCS--
T ss_pred ccccccCCCCCC-CCCEeEC-----CCCCEEEECCCCceECCCC----CcCCC---------------cCeeCCCCCC--
Confidence 467787666 7 6678987 6678999999999854210 12334 344544 686
Q ss_pred CEeeeCCCCeeeeCC--CCCc
Q psy2457 146 AQCTARNHVATCSCP--AGYQ 164 (189)
Q Consensus 146 ~~C~~~~g~~~C~C~--~G~~ 164 (189)
++|++..++|.|.|+ .||.
T Consensus 55 ~~C~n~~g~y~C~C~g~~G~~ 75 (87)
T 1z6c_A 55 QLCVNYPGGYTCYCDGKKGFK 75 (87)
T ss_dssp SEECCCSSSCCEECCSSSCCB
T ss_pred CEEEccCCCEEEECCCCcCCc
Confidence 689999999999995 5665
No 30
>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ...
Probab=98.67 E-value=3.7e-09 Score=72.07 Aligned_cols=71 Identities=24% Similarity=0.622 Sum_probs=21.9
Q ss_pred Cccccccchhh-CCCCCEEeeCCCCeeeeCCCCCccCCCCCCcccCCC-CCCCCC--CCCCCCeeecCCCCCCCCCCeee
Q psy2457 24 DYLGIRLSDSQ-CGVNSECNVRNHIPVCSCPPGYTGDPLTQCRRFDPH-DLCEPN--PCGENAKCQPGYDKSGKDRPVCT 99 (189)
Q Consensus 24 ~c~~~~~c~~~-C~~~~~C~~~~~~~~C~c~~g~~~~~~~~c~~~~~~-~~c~~~--~c~~~~~C~~~~~~~~~~~~~c~ 99 (189)
.|.++++|... |.++++|++..++|.|.|++||.|. .|+ ..+ ++|... +|.. .|.+ ..++|.|.
T Consensus 38 ~c~d~d~C~~~pC~n~g~C~~~~~~y~C~C~~G~~G~---~C~--~~i~d~C~~~~~~C~~--~C~~-----~~g~y~C~ 105 (134)
T 2vh0_B 38 KYKDGDQCETSPCQNQGKCKDGLGEYTCTCLEGFEGK---NCE--LFTRKLCSLDNGDCDQ--FCHE-----EQNSVVCS 105 (134)
T ss_dssp ------------------------------------------------CCGGGTGGGGCSS--EEEE-----ETTEEEEE
T ss_pred cCCCcCcCCCCCCCCcCCcccCCCCEEeeCCCCccCC---ccc--cCCCCccccCCCCCCC--EeEC-----CCCCEEEE
Confidence 48899999877 9988999999999999999999988 896 335 678653 4554 8887 56789999
Q ss_pred CCCCccc
Q psy2457 100 CLPGYVG 106 (189)
Q Consensus 100 c~~g~~~ 106 (189)
|++||.+
T Consensus 106 C~~Gy~l 112 (134)
T 2vh0_B 106 CARGYTL 112 (134)
T ss_dssp CCTTEEE
T ss_pred CCCCcEE
Confidence 9999983
No 31
>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1
Probab=98.65 E-value=4.9e-09 Score=65.91 Aligned_cols=72 Identities=25% Similarity=0.574 Sum_probs=55.2
Q ss_pred ccccchhh---CCCCCEEeeCCCCeeeeCCCCCccCC--CCCCcccCCCCCCCCCC--CCCCCeeecCCCCCCCCCCeee
Q psy2457 27 GIRLSDSQ---CGVNSECNVRNHIPVCSCPPGYTGDP--LTQCRRFDPHDLCEPNP--CGENAKCQPGYDKSGKDRPVCT 99 (189)
Q Consensus 27 ~~~~c~~~---C~~~~~C~~~~~~~~C~c~~g~~~~~--~~~c~~~~~~~~c~~~~--c~~~~~C~~~~~~~~~~~~~c~ 99 (189)
++++|... |.+ +.|++..++|.|.|++||.+.. ...|+ ++++|...+ |. .+.|.+ ..++|.|.
T Consensus 2 dideC~~~~~~C~~-g~C~n~~g~y~C~C~~Gy~~~~~~g~~C~---dideC~~~~~~C~-~~~C~n-----~~g~y~C~ 71 (86)
T 1lmj_A 2 DIDECRISPDLCGR-GQCVNTPGDFECKCDEGYESGFMMMKNCM---DIDECQRDPLLCR-GGVCHN-----TEGSYRCE 71 (86)
T ss_dssp CCCTTTTCSSTTTT-SCEEEETTEEEECCCSSEEECTTTSSSEE---ECCHHHHCSSTTT-TSEEEE-----ETTEEEEE
T ss_pred ccccccCCCCCCCC-CEEECCCCCEEeeCCCCcCccCCCCCccC---CcccccCCCCcCC-CCEeEc-----CCCCEEEE
Confidence 56777653 754 5999999999999999998431 11684 678887655 54 479998 66889999
Q ss_pred CCCCcccCC
Q psy2457 100 CLPGYVGDA 108 (189)
Q Consensus 100 c~~g~~~~~ 108 (189)
|++||.+..
T Consensus 72 C~~G~~~~~ 80 (86)
T 1lmj_A 72 CPPGHQLSP 80 (86)
T ss_dssp SCTTSCCCS
T ss_pred CcCCcccCC
Confidence 999998764
No 32
>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}
Probab=98.65 E-value=6.8e-08 Score=74.95 Aligned_cols=83 Identities=33% Similarity=0.726 Sum_probs=60.9
Q ss_pred CCCCCCCCCCCCCCeeecCCCCCCCCCCeeeCCCCcccCCCCcCccCCCC-CCCCCCCCCccCCCeecCCccccCCCCCE
Q psy2457 69 PHDLCEPNPCGENAKCQPGYDKSGKDRPVCTCLPGYVGDALTYCRRGECQ-SDAECNYDQVCNNYNCEKACTSQCGINAQ 147 (189)
Q Consensus 69 ~~~~c~~~~c~~~~~C~~~~~~~~~~~~~c~c~~g~~~~~~~~c~~~~c~-~~~~c~~~~~c~~~~c~~~c~~~C~~~~~ 147 (189)
++++|..+||.+++.|.+ ..+.|.|.|++||.|.. |. ++++|.... ..+|.+ .
T Consensus 4 d~~~C~~~pC~~~g~C~~-----~~~~~~C~C~~g~~g~~--------C~~~~~eC~~~~-----------~~~C~~--~ 57 (317)
T 3h5c_B 4 GGSPCISQPCLHNGSCQD-----SIWGYTCTCSPGYEGSN--------CELAKNECHPER-----------TDGCQH--F 57 (317)
T ss_dssp --CCTTSCCCTTTCCCCC-----CSSSCCCCCSSSCCSSS--------SCCCSSSCCTTC-----------TTSCSS--E
T ss_pred cCCcCCCCCCCCCCEeEC-----CCCCeEEECCCCCcCCc--------cccCcccCCCCC-----------CCCCcC--c
Confidence 467888899999999987 55779999999999875 33 444443210 014765 8
Q ss_pred eeeCCCCeeeeCCCCCccCCc-ccCeecCCc
Q psy2457 148 CTARNHVATCSCPAGYQGDAL-SRCYPAETT 177 (189)
Q Consensus 148 C~~~~g~~~C~C~~G~~g~~~-~~c~~~~~~ 177 (189)
|++..++|.|.|++||.+... .+|.++..+
T Consensus 58 C~~~~g~~~C~C~~g~~~~~~~~~C~~~~~c 88 (317)
T 3h5c_B 58 CLPGQESYTCSCAQGYRLGEDHKQCVPHDQC 88 (317)
T ss_dssp EECCSSSCEEECCTTEECCTTSSCCEECSSC
T ss_pred cccCCCeeEEecccccccccccccccccccc
Confidence 999999999999999997543 568887665
No 33
>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}
Probab=98.61 E-value=7.6e-08 Score=74.68 Aligned_cols=71 Identities=32% Similarity=0.717 Sum_probs=58.9
Q ss_pred cccccchhh-CCCCCEEeeCCCCeeeeCCCCCccCCCCCCcccCCCCCCCC---CCCCCCCeeecCCCCCCCCCCeeeCC
Q psy2457 26 LGIRLSDSQ-CGVNSECNVRNHIPVCSCPPGYTGDPLTQCRRFDPHDLCEP---NPCGENAKCQPGYDKSGKDRPVCTCL 101 (189)
Q Consensus 26 ~~~~~c~~~-C~~~~~C~~~~~~~~C~c~~g~~~~~~~~c~~~~~~~~c~~---~~c~~~~~C~~~~~~~~~~~~~c~c~ 101 (189)
.|+++|... |.+++.|.+..++|.|.|++||.+. .|+ .++++|.. .+|.+ .|.+ ..++|.|.|.
T Consensus 3 ~d~~~C~~~pC~~~g~C~~~~~~~~C~C~~g~~g~---~C~--~~~~eC~~~~~~~C~~--~C~~-----~~g~~~C~C~ 70 (317)
T 3h5c_B 3 KGGSPCISQPCLHNGSCQDSIWGYTCTCSPGYEGS---NCE--LAKNECHPERTDGCQH--FCLP-----GQESYTCSCA 70 (317)
T ss_dssp ---CCTTSCCCTTTCCCCCCSSSCCCCCSSSCCSS---SSC--CCSSSCCTTCTTSCSS--EEEC-----CSSSCEEECC
T ss_pred ccCCcCCCCCCCCCCEeECCCCCeEEECCCCCcCC---ccc--cCcccCCCCCCCCCcC--cccc-----CCCeeEEecc
Confidence 467888777 9888999999899999999999998 896 58899986 67876 8988 6688999999
Q ss_pred CCcccCC
Q psy2457 102 PGYVGDA 108 (189)
Q Consensus 102 ~g~~~~~ 108 (189)
+||.+..
T Consensus 71 ~g~~~~~ 77 (317)
T 3h5c_B 71 QGYRLGE 77 (317)
T ss_dssp TTEECCT
T ss_pred ccccccc
Confidence 9998754
No 34
>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L*
Probab=98.60 E-value=2e-08 Score=72.47 Aligned_cols=83 Identities=31% Similarity=0.776 Sum_probs=26.6
Q ss_pred CCCCCCCCCCCCCCCeeecCCCCCCCCCCeeeCCCCcccCCCCcCccCCCCC-C-CCCCCCCccCCCeecCCccccCCCC
Q psy2457 68 DPHDLCEPNPCGENAKCQPGYDKSGKDRPVCTCLPGYVGDALTYCRRGECQS-D-AECNYDQVCNNYNCEKACTSQCGIN 145 (189)
Q Consensus 68 ~~~~~c~~~~c~~~~~C~~~~~~~~~~~~~c~c~~g~~~~~~~~c~~~~c~~-~-~~c~~~~~c~~~~c~~~c~~~C~~~ 145 (189)
.++++|..+||.+++.|.+ ..++|.|.|++||.|.. |.. + ++|.... ..|.+
T Consensus 40 ~dideC~~~pC~ngg~C~n-----~~g~y~C~C~~Gf~G~~--------Ce~~i~deC~~~~------------~~C~~- 93 (195)
T 1nfu_B 40 KDGDQCETSPCQNQGKCKD-----GLGEYTCTCLEGFEGKN--------CELFTRKLCSLDN------------GDCDQ- 93 (195)
T ss_dssp ------------------------------------------------------CCGGGTGG------------GGCSS-
T ss_pred CCCcccCCCCCCCCCEeEC-----CCCCeeEeCCCCceecc--------ccccccccccCCC------------CCCCC-
Confidence 4688999999999999987 56789999999999875 332 2 2332110 14664
Q ss_pred CEeeeCCCCeeeeCCCCCccCC-cccCeecCCc
Q psy2457 146 AQCTARNHVATCSCPAGYQGDA-LSRCYPAETT 177 (189)
Q Consensus 146 ~~C~~~~g~~~C~C~~G~~g~~-~~~c~~~~~~ 177 (189)
+|++..++|.|.|++||++.. -..|.++..+
T Consensus 94 -~C~n~~gsy~C~C~~Gy~l~~dG~~C~~~~~~ 125 (195)
T 1nfu_B 94 -FCHEEQNSVVCSCARGYTLADNGKACIPTGPY 125 (195)
T ss_dssp -EEEEETTEEEEECCTTEEECTTSSCEEESSSS
T ss_pred -EeECCCCCeEEECCCCceeCCCCCccccCCCC
Confidence 899999999999999999221 1236666543
No 35
>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ...
Probab=98.55 E-value=5.1e-08 Score=67.04 Aligned_cols=87 Identities=23% Similarity=0.570 Sum_probs=58.2
Q ss_pred CCCCCCCCCCCCCCCeeecCCCCCCCCCCeeeCCCCcccCCCCcCccCCCCCCCCCCCCCccCCCeecCCccc-cCCCCC
Q psy2457 68 DPHDLCEPNPCGENAKCQPGYDKSGKDRPVCTCLPGYVGDALTYCRRGECQSDAECNYDQVCNNYNCEKACTS-QCGINA 146 (189)
Q Consensus 68 ~~~~~c~~~~c~~~~~C~~~~~~~~~~~~~c~c~~g~~~~~~~~c~~~~c~~~~~c~~~~~c~~~~c~~~c~~-~C~~~~ 146 (189)
.++++|..+||.++++|++ ..++|.|.|++||.|..+.. .++.|.. |. +.. .|..
T Consensus 45 ~did~C~~~pC~n~g~C~~-----~~g~y~C~C~~G~~G~~C~~-~~~~c~~---c~-------------~~~~~C~~-- 100 (142)
T 2c4f_L 45 SDGDQCASSPCQNGGSCKD-----QLQSYICFCLPAFEGRNCET-HKDDQLI---CV-------------NENGGCEQ-- 100 (142)
T ss_dssp TTCCGGGGCCCCTTCEEEE-----ETTEEEEECCTTEESTTSCE-EGGGCCS---TT-------------TGGGGCSS--
T ss_pred CccCcCcCCCcCCCCEEeC-----CCCCEEeeCCCCccCCcccc-Ccccccc---cc-------------CCCCCccC--
Confidence 4678888899999999988 56789999999999876321 0011110 11 001 2432
Q ss_pred EeeeCCC-CeeeeCCCCCccCCc-ccCeecCCcc
Q psy2457 147 QCTARNH-VATCSCPAGYQGDAL-SRCYPAETTS 178 (189)
Q Consensus 147 ~C~~~~g-~~~C~C~~G~~g~~~-~~c~~~~~~~ 178 (189)
+|++..+ +|.|.|++||++... ..|.++..++
T Consensus 101 ~C~~~~g~~y~C~C~~Gy~l~~dG~~C~~~~e~p 134 (142)
T 2c4f_L 101 YCSDHTGTKRSCRCHEGYSLLADGVSCTPTVEYP 134 (142)
T ss_dssp EEECCTTSCCEEECCTTEEECTTSSCEEESSSSC
T ss_pred EeECCCCCCEEEECCCCceECCCCCCCCCCCccC
Confidence 8999999 999999999993221 2377766543
No 36
>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ...
Probab=98.54 E-value=3.6e-08 Score=67.11 Aligned_cols=84 Identities=31% Similarity=0.774 Sum_probs=27.4
Q ss_pred CCCCCCCCCCCCCCCeeecCCCCCCCCCCeeeCCCCcccCCCCcCccCCCCC-C-CCCCCCCccCCCeecCCccccCCCC
Q psy2457 68 DPHDLCEPNPCGENAKCQPGYDKSGKDRPVCTCLPGYVGDALTYCRRGECQS-D-AECNYDQVCNNYNCEKACTSQCGIN 145 (189)
Q Consensus 68 ~~~~~c~~~~c~~~~~C~~~~~~~~~~~~~c~c~~g~~~~~~~~c~~~~c~~-~-~~c~~~~~c~~~~c~~~c~~~C~~~ 145 (189)
.++++|..+||.++++|++ ..++|.|.|++||.|.. |.. + ++|.... ..|.+
T Consensus 40 ~d~d~C~~~pC~n~g~C~~-----~~~~y~C~C~~G~~G~~--------C~~~i~d~C~~~~------------~~C~~- 93 (134)
T 2vh0_B 40 KDGDQCETSPCQNQGKCKD-----GLGEYTCTCLEGFEGKN--------CELFTRKLCSLDN------------GDCDQ- 93 (134)
T ss_dssp ------------------------------------------------------CCGGGTGG------------GGCSS-
T ss_pred CCcCcCCCCCCCCcCCccc-----CCCCEEeeCCCCccCCc--------cccCCCCccccCC------------CCCCC-
Confidence 4678898899999899987 55789999999999875 322 2 2332110 14654
Q ss_pred CEeeeCCCCeeeeCCCCCccCCc-ccCeecCCcc
Q psy2457 146 AQCTARNHVATCSCPAGYQGDAL-SRCYPAETTS 178 (189)
Q Consensus 146 ~~C~~~~g~~~C~C~~G~~g~~~-~~c~~~~~~~ 178 (189)
+|++..++|.|.|++||++... ..|.++..++
T Consensus 94 -~C~~~~g~y~C~C~~Gy~l~~~g~~C~~~~~~p 126 (134)
T 2vh0_B 94 -FCHEEQNSVVCSCARGYTLADNGKACIPTGPYP 126 (134)
T ss_dssp -EEEEETTEEEEECCTTEEECTTSSCEEESSSSC
T ss_pred -EeECCCCCEEEECCCCcEECCCCCccCcCCCcC
Confidence 8999999999999999993221 2366665543
No 37
>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L*
Probab=98.51 E-value=1.3e-07 Score=62.52 Aligned_cols=66 Identities=24% Similarity=0.479 Sum_probs=49.0
Q ss_pred CCCCCEEeeCCCCeeeeCCCCCccCCCCCCcccCCCCCCCCCCCCCCCeeecCCCCCCCCCCeeeCCCCcccCC
Q psy2457 35 CGVNSECNVRNHIPVCSCPPGYTGDPLTQCRRFDPHDLCEPNPCGENAKCQPGYDKSGKDRPVCTCLPGYVGDA 108 (189)
Q Consensus 35 C~~~~~C~~~~~~~~C~c~~g~~~~~~~~c~~~~~~~~c~~~~c~~~~~C~~~~~~~~~~~~~c~c~~g~~~~~ 108 (189)
|.++++|++..++|.|.|++||.+. .|+...++++|...+......|++ ..++|.|.|++||.+..
T Consensus 22 C~~~g~C~~~~~~y~C~C~~G~~G~---~C~~~~~~~~C~~~~~~C~~~C~n-----~~g~y~C~C~~G~~~~~ 87 (114)
T 1aut_L 22 CCGHGTCIDGIGSFSCDCRSGWEGR---FCQREVSFLNCSLDNGGCTHYCLE-----EVGWRRCSCAPGYKLGD 87 (114)
T ss_dssp TTTSEEECCCSSCCCEEECTTEEST---TSCEECCSSSSSSGGGGCSSEEEE-----CSSSEEEECCTTEEECT
T ss_pred CCCcCCCCCCCCCcEeeCCCCCcCC---CcCcCCcCCcCcCCCCCCCCEeEC-----CCCCEEeECCCCeeECC
Confidence 7778899999999999999999998 886222234676432222238987 66789999999998643
No 38
>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens}
Probab=98.51 E-value=4.1e-08 Score=61.77 Aligned_cols=69 Identities=25% Similarity=0.475 Sum_probs=51.8
Q ss_pred ccccchhh---CCCCCEEeeCCCCeeeeCCCCCccCCC-CCCcccCCCCCCCCCCCCCCCeeecCCCCCCCCCCeeeCCC
Q psy2457 27 GIRLSDSQ---CGVNSECNVRNHIPVCSCPPGYTGDPL-TQCRRFDPHDLCEPNPCGENAKCQPGYDKSGKDRPVCTCLP 102 (189)
Q Consensus 27 ~~~~c~~~---C~~~~~C~~~~~~~~C~c~~g~~~~~~-~~c~~~~~~~~c~~~~c~~~~~C~~~~~~~~~~~~~c~c~~ 102 (189)
++++|... | ++++|++..++|.|.|++||.+... ..|+ ++++|...+|. +.|++ ..++|.|.|+
T Consensus 2 dideC~~~~~~C-~~~~C~n~~g~y~C~C~~G~~~~~~g~~C~---dideC~~~~C~--~~C~n-----~~g~y~C~C~- 69 (87)
T 1z6c_A 2 DVDECSLKPSIC-GTAVCKNIPGDFECECPEGYRYNLKSKSCE---DIDECSENMCA--QLCVN-----YPGGYTCYCD- 69 (87)
T ss_dssp CSCSSSSSSSSB-TTSSCCCBTTBCCCSSSTTCEEETTTTEEE---CCCHHHHSCCS--SEECC-----CSSSCCEECC-
T ss_pred ccccccCCCCCC-CCCEeECCCCCEEEECCCCceECCCCCcCC---CcCeeCCCCCC--CEEEc-----cCCCEEEECC-
Confidence 46677654 6 5678999999999999999984311 1684 78888878886 68988 6788999996
Q ss_pred CcccC
Q psy2457 103 GYVGD 107 (189)
Q Consensus 103 g~~~~ 107 (189)
|+.|.
T Consensus 70 g~~G~ 74 (87)
T 1z6c_A 70 GKKGF 74 (87)
T ss_dssp SSSCC
T ss_pred CCcCC
Confidence 44443
No 39
>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A
Probab=98.44 E-value=5.9e-08 Score=63.44 Aligned_cols=82 Identities=24% Similarity=0.437 Sum_probs=29.8
Q ss_pred CCCCccCCCCCCcccCCCCCCCCC--CCCCCCeeecCCCCCCCCCCeeeCCCCcccCCCCcCccCCCCCCCCCCCCCccC
Q psy2457 53 PPGYTGDPLTQCRRFDPHDLCEPN--PCGENAKCQPGYDKSGKDRPVCTCLPGYVGDALTYCRRGECQSDAECNYDQVCN 130 (189)
Q Consensus 53 ~~g~~~~~~~~c~~~~~~~~c~~~--~c~~~~~C~~~~~~~~~~~~~c~c~~g~~~~~~~~c~~~~c~~~~~c~~~~~c~ 130 (189)
..+|.+. .| ++++|... .|. ..|.+ ..++|.|.|++||.+... ..|.++++|...
T Consensus 19 ~~~~~~~---~C----d~neC~~~~~~C~--~~C~n-----~~g~y~C~C~~Gy~g~~g-----~~C~dideC~~~---- 75 (107)
T 2w2n_E 19 ENLYFQG---AM----GTNECLDNNGGCS--YVCND-----LKIGYECLCPDGFQLVAQ-----RRCEDIDECQDP---- 75 (107)
T ss_dssp -CCCCSC---CB----SCCGGGTGGGGCS--SEEEC-----CSBSCEEECCTTCEEETT-----TEEEC-----------
T ss_pred CCCcCCC---CC----cCccCcCCCCCCC--CEeEe-----CCCCeEEECCCCccccCC-----CccccccccCCC----
Confidence 3455555 66 35777643 343 47887 567899999999988421 124444444310
Q ss_pred CCeecCCccccCCCCCEeeeCCCCeeeeCCCCCccCCc
Q psy2457 131 NYNCEKACTSQCGINAQCTARNHVATCSCPAGYQGDAL 168 (189)
Q Consensus 131 ~~~c~~~c~~~C~~~~~C~~~~g~~~C~C~~G~~g~~~ 168 (189)
.+|. ++|++..++|.|.|++||+++..
T Consensus 76 ---------~~C~--~~C~n~~gsy~C~C~~Gy~~~~d 102 (107)
T 2w2n_E 76 ---------DTCS--QLCVNLEGGYKCQCEEGFQLDPH 102 (107)
T ss_dssp --------------------------------------
T ss_pred ---------CCcC--CeeecCCCCEEEECCCCceECCC
Confidence 1475 68999999999999999987653
No 40
>1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A
Probab=98.42 E-value=2.7e-07 Score=58.45 Aligned_cols=80 Identities=24% Similarity=0.416 Sum_probs=58.6
Q ss_pred cCCCCCCCccCCCCcccCCCCccccccchhhCCCCCEEeeCCCCeeeeCCCCCccCCCCCCcccCCCCCCCCCCCCCCCe
Q psy2457 4 KFPPRPGFEPSPSRLVASPRDYLGIRLSDSQCGVNSECNVRNHIPVCSCPPGYTGDPLTQCRRFDPHDLCEPNPCGENAK 83 (189)
Q Consensus 4 ~~~~~~gf~~~~~~~~~~~~~c~~~~~c~~~C~~~~~C~~~~~~~~C~c~~g~~~~~~~~c~~~~~~~~c~~~~c~~~~~ 83 (189)
...|..||.+. .| ++++|... .|++..+.|.|.|++||. .|+. .++++|..+||.++++
T Consensus 3 ~C~C~~g~~g~---------~c-~~~~c~~~-----pC~n~~~~y~C~C~~G~~-----~C~~-~~~~~C~~~pC~ngg~ 61 (91)
T 1tpg_A 3 QVICRDEKTQM---------IY-QQHQSWLR-----PVLRSNRVEYCWCNSGRA-----QCHS-VPVKSCSEPRCFNGGT 61 (91)
T ss_dssp CCCCBCSSSCC---------BC-CSSCEEEE-----ECSSSSCEEEEECSSSCC-----BCCE-ECEEECSSCCSCTTCE
T ss_pred eeECCCCCcCC---------eE-CCCcccCC-----ccccCCCCcEeECCCCCc-----cccc-CcCCcccCCCCCCCCE
Confidence 45678888753 12 46666433 355567889999999996 4631 1468898899999999
Q ss_pred eecCCCCCCC--CCCeeeCCCCcccCCC
Q psy2457 84 CQPGYDKSGK--DRPVCTCLPGYVGDAL 109 (189)
Q Consensus 84 C~~~~~~~~~--~~~~c~c~~g~~~~~~ 109 (189)
|++ .. +.|.|.|++||.|..+
T Consensus 62 C~~-----~~~~~~~~C~C~~G~~G~~C 84 (91)
T 1tpg_A 62 CQQ-----ALYFSDFVCQCPEGFAGKSC 84 (91)
T ss_dssp EEE-----ESSSSCEEEECCTTCBSSSC
T ss_pred eec-----CCCCCCeEeECCCCCcCCcC
Confidence 987 33 6799999999998763
No 41
>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A
Probab=98.41 E-value=1.3e-07 Score=61.74 Aligned_cols=70 Identities=24% Similarity=0.507 Sum_probs=29.9
Q ss_pred ccccchhh---CCCCCEEeeCCCCeeeeCCCCCccCCCCCCcccCCCCCCCC-CCCCCCCeeecCCCCCCCCCCeeeCCC
Q psy2457 27 GIRLSDSQ---CGVNSECNVRNHIPVCSCPPGYTGDPLTQCRRFDPHDLCEP-NPCGENAKCQPGYDKSGKDRPVCTCLP 102 (189)
Q Consensus 27 ~~~~c~~~---C~~~~~C~~~~~~~~C~c~~g~~~~~~~~c~~~~~~~~c~~-~~c~~~~~C~~~~~~~~~~~~~c~c~~ 102 (189)
++++|... |. ..|++..++|.|.|++||.+.+...|+ ++++|.. .+|. +.|++ ..++|.|.|++
T Consensus 28 d~neC~~~~~~C~--~~C~n~~g~y~C~C~~Gy~g~~g~~C~---dideC~~~~~C~--~~C~n-----~~gsy~C~C~~ 95 (107)
T 2w2n_E 28 GTNECLDNNGGCS--YVCNDLKIGYECLCPDGFQLVAQRRCE---DIDECQDPDTCS--QLCVN-----LEGGYKCQCEE 95 (107)
T ss_dssp SCCGGGTGGGGCS--SEEECCSBSCEEECCTTCEEETTTEEE---C----------------------------------
T ss_pred cCccCcCCCCCCC--CEeEeCCCCeEEECCCCccccCCCccc---cccccCCCCCcC--Ceeec-----CCCCEEEECCC
Confidence 78899753 75 499999999999999999983222784 7899973 6775 58887 66889999999
Q ss_pred CcccCC
Q psy2457 103 GYVGDA 108 (189)
Q Consensus 103 g~~~~~ 108 (189)
||.+..
T Consensus 96 Gy~~~~ 101 (107)
T 2w2n_E 96 GFQLDP 101 (107)
T ss_dssp ------
T ss_pred CceECC
Confidence 998753
No 42
>1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A
Probab=98.40 E-value=2.8e-07 Score=48.73 Aligned_cols=33 Identities=27% Similarity=0.696 Sum_probs=28.5
Q ss_pred CCccc-cCCCCCEeeeCCCCeeeeCCCCCccCCc
Q psy2457 136 KACTS-QCGINAQCTARNHVATCSCPAGYQGDAL 168 (189)
Q Consensus 136 ~~c~~-~C~~~~~C~~~~g~~~C~C~~G~~g~~~ 168 (189)
|+|.. +|.++++|++..++|.|.|++||+|..+
T Consensus 4 d~C~~~pC~ngg~C~~~~~~~~C~C~~G~~G~~C 37 (39)
T 1edm_B 4 DQCESNPCLNGGSCKDDINSYECWCPFGFEGKNC 37 (39)
T ss_dssp CTTTTCCCCTTCEEEEETTEEEEECCTTCCSTTS
T ss_pred ccCCCCCCCCCCEeEcCCCceEeECCCCCcCCcc
Confidence 45544 7999999999999999999999999875
No 43
>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A
Probab=98.37 E-value=1.4e-07 Score=62.80 Aligned_cols=81 Identities=32% Similarity=0.678 Sum_probs=53.3
Q ss_pred CCCCCCCCCCCCCCCeeecCCCCCC-CCCCeeeCCCCcccCCCCcCccCCCCCCCCCCCCCccCCCeecCCccccCCCCC
Q psy2457 68 DPHDLCEPNPCGENAKCQPGYDKSG-KDRPVCTCLPGYVGDALTYCRRGECQSDAECNYDQVCNNYNCEKACTSQCGINA 146 (189)
Q Consensus 68 ~~~~~c~~~~c~~~~~C~~~~~~~~-~~~~~c~c~~g~~~~~~~~c~~~~c~~~~~c~~~~~c~~~~c~~~c~~~C~~~~ 146 (189)
.++++|..+||.+ +|++ . .++|.|.|++||.+... ..+.|.+ .|... +|. +
T Consensus 2 ~dideC~~~pC~~--~C~~-----~~~g~y~C~C~~Gy~g~~~---~~~~C~~--~C~~~--------------~C~--~ 53 (118)
T 1dx5_I 2 EPVDPCFRANCEY--QCQP-----LDQTSYLCVCAEGFAPIPH---EPHRCQM--FCNQT--------------ACP--A 53 (118)
T ss_dssp CCCCGGGGCCCSS--EEEE-----CSSSCEEEECCTTEEEETT---EEEEEEE--CCCSS--------------EEE--C
T ss_pred CccccCCCCCCCC--CCCC-----CCCCCEEeECCCCccccCC---CCCcccc--ccCCC--------------CCC--C
Confidence 4678888888974 8988 5 67899999999998742 1112221 11111 354 5
Q ss_pred EeeeCCCCeeeeCCCCCccCCcccCeecCCc
Q psy2457 147 QCTARNHVATCSCPAGYQGDALSRCYPAETT 177 (189)
Q Consensus 147 ~C~~~~g~~~C~C~~G~~g~~~~~c~~~~~~ 177 (189)
+|++ .++|.|.|++||++..-..|.++.++
T Consensus 54 ~C~~-~~~y~C~C~~Gy~~~~g~~C~dideC 83 (118)
T 1dx5_I 54 DCDP-NTQASCECPEGYILDDGFICTDIDEC 83 (118)
T ss_dssp EECT-TSTTCEECCTTEEEETTTEEEECCHH
T ss_pred cccC-CCCeEeECCCCccCCCCCcccccccc
Confidence 7877 58899999999994422236666544
No 44
>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B*
Probab=98.37 E-value=1.3e-06 Score=70.42 Aligned_cols=103 Identities=29% Similarity=0.760 Sum_probs=70.5
Q ss_pred CCCCCEEeeCCCCeeeeCCCCCccCCCCCCcccCCC----------CCCC-CCCCCCCCeeecCCCCCCCCCCeeeCCCC
Q psy2457 35 CGVNSECNVRNHIPVCSCPPGYTGDPLTQCRRFDPH----------DLCE-PNPCGENAKCQPGYDKSGKDRPVCTCLPG 103 (189)
Q Consensus 35 C~~~~~C~~~~~~~~C~c~~g~~~~~~~~c~~~~~~----------~~c~-~~~c~~~~~C~~~~~~~~~~~~~c~c~~g 103 (189)
|.++++|.. +.+.|.|.+||.|. .|+ ... +.|. ..+|...+.|.. +.+.|.|.+|
T Consensus 205 C~~~G~C~~--~~g~C~C~~G~~G~---~Ce--~~C~~g~~g~~C~~~C~~~~~C~~~g~C~~-------~~~~C~C~~G 270 (423)
T 2gy5_A 205 CMNNGVCHE--DTGECICPPGFMGR---TCE--KACELHTFGRTCKERCSGQEGCKSYVFCLP-------DPYGCSCATG 270 (423)
T ss_dssp CCTTCEECT--TTCCEECCTTEEST---TSC--EECCTTEESTTSCEECCSTTTTTTCCEEET-------TTTEEECCBT
T ss_pred CCCCCEEEC--CCCcEeCCCCccCC---Ccc--cccCCCCCCCCcCccCCCCCCCCCCCEECC-------CCCeEEeCCC
Confidence 777889976 45789999999999 885 111 1233 345666677753 4699999999
Q ss_pred cccCCCCcCccCCCCCC---CCCCCCCccCCCeecCCccccCCCCCEeeeCCCCeeeeCCCCCccCCcccC
Q psy2457 104 YVGDALTYCRRGECQSD---AECNYDQVCNNYNCEKACTSQCGINAQCTARNHVATCSCPAGYQGDALSRC 171 (189)
Q Consensus 104 ~~~~~~~~c~~~~c~~~---~~c~~~~~c~~~~c~~~c~~~C~~~~~C~~~~g~~~C~C~~G~~g~~~~~c 171 (189)
|.|..++. .|... ..|. ..| +|.++++|.+.. .|.|++||+|..+..+
T Consensus 271 ~~G~~C~~----~C~~G~~G~~C~-----------~~C--~C~ngg~C~~~~---~C~C~~G~~G~~Ce~~ 321 (423)
T 2gy5_A 271 WKGLQCNE----ACHPGFYGPDCK-----------LRC--SCNNGEMCDRFQ---GCLCSPGWQGLQCERE 321 (423)
T ss_dssp CBSGGGCB----CCCTTBCSBTTC-----------CBC--CCTTCCEEETTT---EEECCTTCBSTTSCBC
T ss_pred cccccccC----ccCCCCcCCccc-----------ccc--cCCCCCEecCCC---ceECCCCCcCCCCccC
Confidence 99987652 23221 1121 112 488889998664 4999999999998643
No 45
>3u7u_G Neuregulin 1; signaling protein, transferase-transferase regulator complex glycosylation; HET: NAG; 3.03A {Homo sapiens}
Probab=98.31 E-value=4e-07 Score=51.84 Aligned_cols=35 Identities=20% Similarity=0.452 Sum_probs=28.2
Q ss_pred cCCccc-cCCCCCEee-----eCCCCeeeeCCCCCccCCcc
Q psy2457 135 EKACTS-QCGINAQCT-----ARNHVATCSCPAGYQGDALS 169 (189)
Q Consensus 135 ~~~c~~-~C~~~~~C~-----~~~g~~~C~C~~G~~g~~~~ 169 (189)
+|+|.+ +|+++|+|+ +..++|.|.|++||+|.++.
T Consensus 8 ~~eC~s~pC~NgGtC~~~~~~d~~~~y~C~C~~g~~G~~CE 48 (55)
T 3u7u_G 8 CAEKEKTFCVNGGECFMVKDLSNPSRYLCKCPNEFTGDRCQ 48 (55)
T ss_dssp CCSTTTTTSCTTCEEEEECCC--CCCEEEEECTTEESTTSC
T ss_pred CCCCcCCCCCCCCCcCCCCccCCCCCEeEeCCCCCcCCCcC
Confidence 466666 899999994 56789999999999999975
No 46
>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 4g1e_B* 3ije_B* 4g1m_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B*
Probab=98.27 E-value=1.8e-06 Score=73.42 Aligned_cols=106 Identities=25% Similarity=0.612 Sum_probs=73.6
Q ss_pred CCCCCEEeeCCCCeeeeCC----CCCccCCCCCCcccCCCCCCCC---CCCCCCCeeecCCCCCCCCCCeeeCCCCcccC
Q psy2457 35 CGVNSECNVRNHIPVCSCP----PGYTGDPLTQCRRFDPHDLCEP---NPCGENAKCQPGYDKSGKDRPVCTCLPGYVGD 107 (189)
Q Consensus 35 C~~~~~C~~~~~~~~C~c~----~g~~~~~~~~c~~~~~~~~c~~---~~c~~~~~C~~~~~~~~~~~~~c~c~~g~~~~ 107 (189)
|.+++.|.. +.|.|. +||.|. .|+ .+...|.. .+|...+.|.. +.|.|.+||.|.
T Consensus 495 Cs~~G~C~~----g~C~C~~~~~~Gy~G~---~Ce--~~~~~C~~~~~~~C~~~G~C~~---------g~C~C~~Gy~G~ 556 (690)
T 3fcs_B 495 CSQRGECLC----GQCVCHSSDFGKITGK---YCE--CDDFSCVRYKGEMCSGHGQCSC---------GDCLCDSDWTGY 556 (690)
T ss_dssp GGGSEEECS----SSEEECCCSSCCCBST---TSC--BCSSCCCBSSSSBGGGSEEEET---------TEEEECTTEESS
T ss_pred CCCCCEEEC----CeeEeecCCCCCeeCC---CcC--cccCcCcCCCCCCCCCCCEecC---------CeeECcCCCcCC
Confidence 777888973 589999 999999 896 45677874 46888889974 789999999999
Q ss_pred CCCcC--ccCCCCC--CCCCCCCCccCCCee------------c--CCccccCCCCCEeeeCCCCeeeeCCCCCccCC
Q psy2457 108 ALTYC--RRGECQS--DAECNYDQVCNNYNC------------E--KACTSQCGINAQCTARNHVATCSCPAGYQGDA 167 (189)
Q Consensus 108 ~~~~c--~~~~c~~--~~~c~~~~~c~~~~c------------~--~~c~~~C~~~~~C~~~~g~~~C~C~~G~~g~~ 167 (189)
.++ | ....|.. ...|..+.+|.+++| . ..|..+|.+++.|++ |..+|+|..
T Consensus 557 ~Ce-C~~~~~~C~~~~g~~C~~~G~C~~g~C~C~~~Gy~G~~Ce~C~~C~~~C~~~g~Cv~--------C~~g~tG~~ 625 (690)
T 3fcs_B 557 YCN-CTTRTDTCMSSNGLLCSGRGKCECGSCVCIQPGSYGDTCEKCPTCPDACTFKKECVE--------CKKFDRGAL 625 (690)
T ss_dssp SSC-EECCCTTTBCTTSSBTSSSCEEETTEEECCSTTCBSTTSCBCTTSCCTTTSCCGGGT--------TTTTCCSSS
T ss_pred CCc-cCCCCCcccCCCCCCCCCCCEEeCCEEECCCCCccCCCcCcCCCCCCCCCCCCCccc--------CCCCCccCC
Confidence 865 2 1334442 134555555554444 1 234336777777764 899999884
No 47
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.16 E-value=1.9e-06 Score=68.97 Aligned_cols=80 Identities=25% Similarity=0.463 Sum_probs=54.7
Q ss_pred CCCCCCCCCCCCeeecCCCCCCCCCCeeeCCCCcccCCCCcCccCCCCCCCCCCCCCccCCCeecCCccccCCCCCEeee
Q psy2457 71 DLCEPNPCGENAKCQPGYDKSGKDRPVCTCLPGYVGDALTYCRRGECQSDAECNYDQVCNNYNCEKACTSQCGINAQCTA 150 (189)
Q Consensus 71 ~~c~~~~c~~~~~C~~~~~~~~~~~~~c~c~~g~~~~~~~~c~~~~c~~~~~c~~~~~c~~~~c~~~c~~~C~~~~~C~~ 150 (189)
++|...++.....|.+ .+++|.|.|++||.+..- ..|.++++|... .+|.+ .|++
T Consensus 1 ~eC~~~~~~c~~~C~~-----~~~~y~C~C~~G~~~~~~-----~~C~dideC~~~-------------~~C~~--~C~n 55 (400)
T 3p5b_L 1 NECLDNNGGCSHVCND-----LKIGYECLCPDGFQLVAQ-----RRCEDIDECQDP-------------DTCSQ--LCVN 55 (400)
T ss_dssp CCTTTTGGGCSSEEEE-----CSSSEEEECCTTEEECSS-----SCEEECCCCSTT-------------SSCSS--CCBC
T ss_pred CcccCCCCCCCCEeEC-----CCCCeEEECCCCCCcCCC-----CcccCchhhhcc-------------CCCCC--ccCC
Confidence 3566666656678988 678899999999985221 124444444321 14654 7999
Q ss_pred CCCCeeeeCCCCCccCCc-ccCeecC
Q psy2457 151 RNHVATCSCPAGYQGDAL-SRCYPAE 175 (189)
Q Consensus 151 ~~g~~~C~C~~G~~g~~~-~~c~~~~ 175 (189)
..|+|.|.|++||+++.. .+|.++.
T Consensus 56 ~~g~~~C~C~~g~~~~~~~~~C~~~~ 81 (400)
T 3p5b_L 56 LEGGYKCQCEEGFQLDPHTKACKAVG 81 (400)
T ss_dssp CSSSCBCCCCTTCCCCTTTSSCCCST
T ss_pred Cccceeeeccccccccccccceeecc
Confidence 999999999999996644 4576654
No 48
>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B*
Probab=98.10 E-value=1.7e-06 Score=73.41 Aligned_cols=114 Identities=24% Similarity=0.635 Sum_probs=76.1
Q ss_pred CCCCCEEeeCCCCeeeeCCCCCccCCCCCCcccCCCC---------CCCCC----CCCCCCeeecCCCCCCCCCCeeeCC
Q psy2457 35 CGVNSECNVRNHIPVCSCPPGYTGDPLTQCRRFDPHD---------LCEPN----PCGENAKCQPGYDKSGKDRPVCTCL 101 (189)
Q Consensus 35 C~~~~~C~~~~~~~~C~c~~g~~~~~~~~c~~~~~~~---------~c~~~----~c~~~~~C~~~~~~~~~~~~~c~c~ 101 (189)
|..++.|. ...|.|.+||.|. .|+ ...+ .|... +|...+.|.. ..|.|.
T Consensus 437 Cs~~G~C~----~g~C~C~~Gy~G~---~Ce--c~~~~~~~~~~~~~C~~~~~~~~Cs~~G~C~~---------G~C~C~ 498 (687)
T 3k6s_B 437 CHGKGFLE----CGICRCDTGYIGK---NCE--CQTQGRSSQELEGSCRKDNNSIICSGLGDCVC---------GQCLCH 498 (687)
T ss_dssp GGGSEEES----SSSEEECSSEEST---TSC--EESSSCCCSGGGSTTSSSTTSCGGGSSEEEET---------TEEEEC
T ss_pred CCCCCEEe----CCEeEcCCCCcCC---ccc--ccCCcCCccccCCCCCCCCCCCcCCCCCEEeC---------CEEEcC
Confidence 66667775 2479999999999 885 2222 46532 3777888875 489999
Q ss_pred ------CCcccCCCCcCccCCCCC--CCCCCC--CCccCCCee----------------cCCccc----cCCCCCEeeeC
Q psy2457 102 ------PGYVGDALTYCRRGECQS--DAECNY--DQVCNNYNC----------------EKACTS----QCGINAQCTAR 151 (189)
Q Consensus 102 ------~g~~~~~~~~c~~~~c~~--~~~c~~--~~~c~~~~c----------------~~~c~~----~C~~~~~C~~~ 151 (189)
+||.|..++ +....|.. ...|.. +.+|..+.| ++.|.. +|..+|+|..
T Consensus 499 ~~~~~~~G~~G~~Ce-~~~~~C~~~~~~~C~~~~~G~C~~g~C~C~~G~~G~~Cec~~~~~~C~~~~g~~Cs~~G~C~~- 576 (687)
T 3k6s_B 499 TSDVPGKLIYGQYCE-CDTINCERYNGQVCGGPGRGLCFCGKCRCHPGFEGSACQCERTTEGCLNPRRVECSGRGRCRC- 576 (687)
T ss_dssp CCCSTTCCEESTTSC-EESSCSCEETTEETSHHHHEEEETTEEEECTTCCSTTSCSCCSSCTTBCTTCSBTSSSCCBCS-
T ss_pred CCCCCCCCccccccc-cccccccCCCCcCcCCCCCCeEECCEEEcCCCCcCCCCccCCCCCCCCCCCCCCCCCCCcCCC-
Confidence 999998854 12344442 223544 444444444 245653 5888899976
Q ss_pred CCCeeeeCCCCCccCCcccC
Q psy2457 152 NHVATCSCPAGYQGDALSRC 171 (189)
Q Consensus 152 ~g~~~C~C~~G~~g~~~~~c 171 (189)
..|.|++||+|..|..|
T Consensus 577 ---g~C~C~~Gy~G~~Ce~c 593 (687)
T 3k6s_B 577 ---NVCECHSGYQLPLCQEC 593 (687)
T ss_dssp ---SCBCCSTTCCTTTTCCC
T ss_pred ---CEEECCCCCcCCCCCCC
Confidence 37999999999998643
No 49
>1egf_A Epidermal growth factor; NMR {Mus musculus} SCOP: g.3.11.1 PDB: 1epg_A 1eph_A 1epi_A 1epj_A 3egf_A 1gk5_A
Probab=98.03 E-value=5.3e-06 Score=46.86 Aligned_cols=29 Identities=31% Similarity=0.629 Sum_probs=26.0
Q ss_pred cCCCCCEee--eCCCCeeeeCCCCCccCCcc
Q psy2457 141 QCGINAQCT--ARNHVATCSCPAGYQGDALS 169 (189)
Q Consensus 141 ~C~~~~~C~--~~~g~~~C~C~~G~~g~~~~ 169 (189)
+|.++|+|+ +..++|.|.|++||+|..+.
T Consensus 13 pC~ngg~C~~~~~~~~~~C~C~~G~~G~~Ce 43 (53)
T 1egf_A 13 YCLNGGVCMHIESLDSYTCNCVIGYSGDRCQ 43 (53)
T ss_dssp SSCSSCEEEEESSSSCEEEECCTTCCSSSSC
T ss_pred cCCCCcEEEeeCCCCCEEEECCCCCcCCcCC
Confidence 698999998 78899999999999999864
No 50
>2k2s_B Micronemal protein 6; microneme protein complex, cell adhesion, cytoplasmic vesicl lectin, virulence, EGF-like domain, membrane; NMR {Toxoplasma gondii} PDB: 2k2t_A
Probab=98.03 E-value=1.5e-06 Score=50.48 Aligned_cols=34 Identities=32% Similarity=0.702 Sum_probs=29.4
Q ss_pred cCCccc-cCCCC--CEeeeCCCCeeeeCCCCCc-cCCc
Q psy2457 135 EKACTS-QCGIN--AQCTARNHVATCSCPAGYQ-GDAL 168 (189)
Q Consensus 135 ~~~c~~-~C~~~--~~C~~~~g~~~C~C~~G~~-g~~~ 168 (189)
+|+|.+ +|.++ ++|++..++|.|.|++||+ |..+
T Consensus 11 ~d~C~snPC~nga~gtC~~~~g~y~C~C~~Gy~~G~~C 48 (61)
T 2k2s_B 11 PAACSSNPCGPEAAGTCKETNSGYICRCNQGYRISLDG 48 (61)
T ss_dssp CCHHHHCSSCSSSCCEEEECSSEEEEECCTTEEEEECS
T ss_pred CCcCcCCCCcCCCccccccCCCceEeECCCCCccCCCC
Confidence 356655 79988 7999999999999999999 9875
No 51
>1hae_A Heregulin-alpha; growth factor; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1haf_A 1hre_A 1hrf_A
Probab=97.98 E-value=4.8e-06 Score=48.81 Aligned_cols=34 Identities=18% Similarity=0.443 Sum_probs=27.9
Q ss_pred CCccc-cCCCCCEeee-----CCCCeeeeCCCCCccCCcc
Q psy2457 136 KACTS-QCGINAQCTA-----RNHVATCSCPAGYQGDALS 169 (189)
Q Consensus 136 ~~c~~-~C~~~~~C~~-----~~g~~~C~C~~G~~g~~~~ 169 (189)
++|.. +|.++|+|++ ..++|.|.|++||+|..+.
T Consensus 7 ~~C~~~pC~ngG~C~~~~~~~~~~~y~C~C~~Gf~G~~Ce 46 (63)
T 1hae_A 7 AEKEKTFCVNGGECFMVKDLSNPSRYLCKCQPGFTGARCT 46 (63)
T ss_dssp CHHHHTTSCTTCEEEEEESSSSSCCEEEECCTTEESTTSC
T ss_pred CCCCCCcCCCCcEEecCCccCCCCCEEEECCCCCcCCccC
Confidence 34544 7999999986 5689999999999999964
No 52
>1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A
Probab=97.89 E-value=1.1e-05 Score=42.41 Aligned_cols=36 Identities=25% Similarity=0.563 Sum_probs=31.2
Q ss_pred ccccchhh-CCCCCEEeeCCCCeeeeCCCCCccCCCCCCc
Q psy2457 27 GIRLSDSQ-CGVNSECNVRNHIPVCSCPPGYTGDPLTQCR 65 (189)
Q Consensus 27 ~~~~c~~~-C~~~~~C~~~~~~~~C~c~~g~~~~~~~~c~ 65 (189)
++++|... |.++++|++..++|.|.|++||.|. .|+
T Consensus 2 d~d~C~~~pC~ngg~C~~~~~~~~C~C~~G~~G~---~Ce 38 (39)
T 1edm_B 2 DGDQCESNPCLNGGSCKDDINSYECWCPFGFEGK---NCE 38 (39)
T ss_dssp CCCTTTTCCCCTTCEEEEETTEEEEECCTTCCST---TSC
T ss_pred ccccCCCCCCCCCCEeEcCCCceEeECCCCCcCC---ccC
Confidence 56778766 9989999999999999999999988 774
No 53
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=97.87 E-value=1.3e-05 Score=64.05 Aligned_cols=60 Identities=27% Similarity=0.587 Sum_probs=47.8
Q ss_pred CEEeeCCCCeeeeCCCCCccCCCCCCcccCCCCCCC-CCCCCCCCeeecCCCCCCCCCCeeeCCCCcccCC
Q psy2457 39 SECNVRNHIPVCSCPPGYTGDPLTQCRRFDPHDLCE-PNPCGENAKCQPGYDKSGKDRPVCTCLPGYVGDA 108 (189)
Q Consensus 39 ~~C~~~~~~~~C~c~~g~~~~~~~~c~~~~~~~~c~-~~~c~~~~~C~~~~~~~~~~~~~c~c~~g~~~~~ 108 (189)
..|.+.+++|.|.|++||.+.+...|+ ++++|. ..+|.. .|.+ ..++|.|.|.+||.+..
T Consensus 12 ~~C~~~~~~y~C~C~~G~~~~~~~~C~---dideC~~~~~C~~--~C~n-----~~g~~~C~C~~g~~~~~ 72 (400)
T 3p5b_L 12 HVCNDLKIGYECLCPDGFQLVAQRRCE---DIDECQDPDTCSQ--LCVN-----LEGGYKCQCEEGFQLDP 72 (400)
T ss_dssp SEEEECSSSEEEECCTTEEECSSSCEE---ECCCCSTTSSCSS--CCBC-----CSSSCBCCCCTTCCCCT
T ss_pred CEeECCCCCeEEECCCCCCcCCCCccc---CchhhhccCCCCC--ccCC-----Cccceeeeccccccccc
Confidence 599999999999999999853222784 789997 356754 7887 67889999999998653
No 54
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=97.83 E-value=4.3e-06 Score=66.51 Aligned_cols=83 Identities=29% Similarity=0.528 Sum_probs=19.4
Q ss_pred CCCCCCCCCCCCCCeeecCCCCCCCCCCeeeCCCCcccCCCCcCccCCCCCCCCCCCCCccCCCeecCCccccCCCCCEe
Q psy2457 69 PHDLCEPNPCGENAKCQPGYDKSGKDRPVCTCLPGYVGDALTYCRRGECQSDAECNYDQVCNNYNCEKACTSQCGINAQC 148 (189)
Q Consensus 69 ~~~~c~~~~c~~~~~C~~~~~~~~~~~~~c~c~~g~~~~~~~~c~~~~c~~~~~c~~~~~c~~~~c~~~c~~~C~~~~~C 148 (189)
++++|...++.....|.+ ..++|.|.|++||....- ...|.++++|... .+|.+ .|
T Consensus 2 ~~~~C~~~~~~c~~~C~~-----~~g~~~C~C~~G~~l~~~----~~~C~d~~eC~~~-------------~~C~~--~C 57 (386)
T 3v65_B 2 GEENCNVNNGGCAQKCQM-----IRGAVQCTCHTGYRLTED----GRTCQDVNECAEE-------------GYCSQ--GC 57 (386)
T ss_dssp ------------------------------------------------------------------------CCTT--EE
T ss_pred CcCcccCCCCCCCCCCcC-----CCCCcEeECCCCceECCC----CCccCccceeCCc-------------CcccC--cC
Confidence 357777666444447866 557799999999974320 0135454444311 15765 49
Q ss_pred eeCCCCeeeeCCCCCccCC-cccCeecC
Q psy2457 149 TARNHVATCSCPAGYQGDA-LSRCYPAE 175 (189)
Q Consensus 149 ~~~~g~~~C~C~~G~~g~~-~~~c~~~~ 175 (189)
.+..|+|.|.|++||.... -.+|.++.
T Consensus 58 ~~~~g~~~C~C~~g~~l~~d~~~C~~~~ 85 (386)
T 3v65_B 58 TNSEGAFQCWCEAGYELRPDRRSCKALG 85 (386)
T ss_dssp C-----CCEECCTTEEECTTSSCEEECS
T ss_pred CCCCCCCeEEECCCceEcCCCCeECCcc
Confidence 9999999999999998332 23466554
No 55
>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B*
Probab=97.82 E-value=3.6e-05 Score=62.00 Aligned_cols=90 Identities=28% Similarity=0.697 Sum_probs=60.8
Q ss_pred eeeeCCCCCccCCCCCCcccCCCCCCCCCCCCCCCeeecCCCCCCCCCCeeeCCCCcccCCCCc-CccCCCCCCCCCCCC
Q psy2457 48 PVCSCPPGYTGDPLTQCRRFDPHDLCEPNPCGENAKCQPGYDKSGKDRPVCTCLPGYVGDALTY-CRRGECQSDAECNYD 126 (189)
Q Consensus 48 ~~C~c~~g~~~~~~~~c~~~~~~~~c~~~~c~~~~~C~~~~~~~~~~~~~c~c~~g~~~~~~~~-c~~~~c~~~~~c~~~ 126 (189)
+.|.|..||.|. .|+ ..| .+|.+++.|.. +.+.|.|.+||.|..++. |... .....|
T Consensus 185 ~~c~C~~g~~G~---~C~-----~~C--~~C~~~G~C~~-------~~g~C~C~~G~~G~~Ce~~C~~g--~~g~~C--- 242 (423)
T 2gy5_A 185 IVRRCEAQKWGP---ECN-----HLC--TACMNNGVCHE-------DTGECICPPGFMGRTCEKACELH--TFGRTC--- 242 (423)
T ss_dssp EECSSCTTEEST---TSC-----EEC--CCCCTTCEECT-------TTCCEECCTTEESTTSCEECCTT--EESTTS---
T ss_pred cCCcCCCCCCCC---CCC-----CCC--CCCCCCCEEEC-------CCCcEeCCCCccCCCcccccCCC--CCCCCc---
Confidence 357899999988 784 234 37888899975 357999999999988652 2210 000111
Q ss_pred CccCCCeecCCccc--cCCCCCEeeeCCCCeeeeCCCCCccCCcc
Q psy2457 127 QVCNNYNCEKACTS--QCGINAQCTARNHVATCSCPAGYQGDALS 169 (189)
Q Consensus 127 ~~c~~~~c~~~c~~--~C~~~~~C~~~~g~~~C~C~~G~~g~~~~ 169 (189)
.++|.. .|.+++.|. .+.|.|.|++||+|..+.
T Consensus 243 --------~~~C~~~~~C~~~g~C~--~~~~~C~C~~G~~G~~C~ 277 (423)
T 2gy5_A 243 --------KERCSGQEGCKSYVFCL--PDPYGCSCATGWKGLQCN 277 (423)
T ss_dssp --------CEECCSTTTTTTCCEEE--TTTTEEECCBTCBSGGGC
T ss_pred --------CccCCCCCCCCCCCEEC--CCCCeEEeCCCccccccc
Confidence 122321 577778884 467899999999998875
No 56
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.80 E-value=0.00011 Score=62.84 Aligned_cols=81 Identities=25% Similarity=0.464 Sum_probs=51.6
Q ss_pred CCCCCCCCCCCCCeeecCCCCCCCCCCeeeCCCCcccCCCCcCccCCCCCCCCCCCCCccCCCeecCCccccCCCCCEee
Q psy2457 70 HDLCEPNPCGENAKCQPGYDKSGKDRPVCTCLPGYVGDALTYCRRGECQSDAECNYDQVCNNYNCEKACTSQCGINAQCT 149 (189)
Q Consensus 70 ~~~c~~~~c~~~~~C~~~~~~~~~~~~~c~c~~g~~~~~~~~c~~~~c~~~~~c~~~~~c~~~~c~~~c~~~C~~~~~C~ 149 (189)
+++|...+......|.+ ..++|.|.|++||.+..- ..|.++++|.... .|. .+|+
T Consensus 294 ~~eC~~~~~~C~~~C~~-----~~~~~~C~C~~G~~~~~~-----~~C~dideC~~~~-------------~C~--~~C~ 348 (699)
T 1n7d_A 294 TNECLDNNGGCSHVCND-----LKIGYECLCPDGFQLVAQ-----RRCEDIDECQDPD-------------TCS--QLCV 348 (699)
T ss_dssp CCCTTSSTTTSCTTCCC-----CTTCCCCCCCSSSCCCSS-----SCCCCCCCCSSSS-------------SCT--TTCC
T ss_pred cccccccccCcCCCccc-----CCCCcEEeCCCCeEcCCC-----CcccCccccCCCC-------------ccc--cccc
Confidence 45555332111246776 667899999999985221 2355555554211 464 3799
Q ss_pred eCCCCeeeeCCCCCccCCc-ccCeecC
Q psy2457 150 ARNHVATCSCPAGYQGDAL-SRCYPAE 175 (189)
Q Consensus 150 ~~~g~~~C~C~~G~~g~~~-~~c~~~~ 175 (189)
+..++|.|.|++||++... .+|.++.
T Consensus 349 n~~g~y~C~C~~G~~~~~~~~~C~~~~ 375 (699)
T 1n7d_A 349 NLEGGYKCQCEEGFQLDPHTKACKAVG 375 (699)
T ss_dssp BCSSCBCCCCCSSCBCCSSCCCCBCCS
T ss_pred cCCCCeeeeeecccccCCCCCcccccc
Confidence 9999999999999996543 4476553
No 57
>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A
Probab=97.80 E-value=1.8e-06 Score=60.54 Aligned_cols=91 Identities=21% Similarity=0.381 Sum_probs=56.9
Q ss_pred CCCCCCCccCCCCcccCCCCcccccc--chhh---C--CCCCEEeeCCC----CeeeeCCCCCc----------------
Q psy2457 5 FPPRPGFEPSPSRLVASPRDYLGIRL--SDSQ---C--GVNSECNVRNH----IPVCSCPPGYT---------------- 57 (189)
Q Consensus 5 ~~~~~gf~~~~~~~~~~~~~c~~~~~--c~~~---C--~~~~~C~~~~~----~~~C~c~~g~~---------------- 57 (189)
..|.+||.+. .+++.|.++++ |... | ..++.|++..+ +|.|.|..||.
T Consensus 26 C~C~~Gy~~~-----~~g~~C~d~~~~~C~~~~~~c~~~~~~~C~~~~~~~~~~~~C~C~~G~~~~~~C~~C~~~~~~~y 100 (162)
T 1uzk_A 26 CDCPPDFELN-----PTRVGCVDTRSGNCYLDIRPRGDNGDTACSNEIGVGVSKASCCCSLGKAWGTPCEMCPAVNTSEY 100 (162)
T ss_dssp EECCTTCEEC-----TTSSBEECCCCEEEEEEC----------CEEEEEEEECHHHHHTTTCCEETTTTEECCCTTSHHH
T ss_pred EeCCCCCeEC-----CCCCcccCCCCCcccCCCcccCCCCCCcccCCcCCcccCceeeCCCCCCcCCCcccCCCCCCCCc
Confidence 3578899876 56677887776 7542 2 23467777654 56666666554
Q ss_pred -----------cCCCCCCcccCCCCCCCC--CCCCCCCeeecCCCCCCCCCCeeeCCCCcccCC
Q psy2457 58 -----------GDPLTQCRRFDPHDLCEP--NPCGENAKCQPGYDKSGKDRPVCTCLPGYVGDA 108 (189)
Q Consensus 58 -----------~~~~~~c~~~~~~~~c~~--~~c~~~~~C~~~~~~~~~~~~~c~c~~g~~~~~ 108 (189)
+.....+. .++++|.. .+|.+ +.|++ ..++|.|.|++||.+..
T Consensus 101 ~C~C~~g~G~~~~~~~~~c--~dideC~~~~~~C~~-g~C~n-----~~gsy~C~C~~Gy~g~~ 156 (162)
T 1uzk_A 101 KILCPGGEGFRPNPITVIL--EDIDECQELPGLCQG-GKCIN-----TFGSFQCRCPTGYYLNE 156 (162)
T ss_dssp HHHCTTCTTEEECTTTCCE--EECCHHHHCGGGGBT-SEEEE-----CSSCEEEECCTTCCBCT
T ss_pred eeECCCCCCcccCCCCCcc--CccccccCCCCCcCC-CEeEc-----CCCCEEeeCCCCccCCC
Confidence 33211121 36788864 45865 69998 67889999999998864
No 58
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=97.76 E-value=2.9e-05 Score=67.23 Aligned_cols=71 Identities=24% Similarity=0.475 Sum_probs=48.1
Q ss_pred CeeecCCCCCCCCCCeeeCCCCcccCCCCcCccCCCCCCCCCCCCCccCCCeecCCccccCCCCCEeeeCCCCeeeeCCC
Q psy2457 82 AKCQPGYDKSGKDRPVCTCLPGYVGDALTYCRRGECQSDAECNYDQVCNNYNCEKACTSQCGINAQCTARNHVATCSCPA 161 (189)
Q Consensus 82 ~~C~~~~~~~~~~~~~c~c~~g~~~~~~~~c~~~~c~~~~~c~~~~~c~~~~c~~~c~~~C~~~~~C~~~~g~~~C~C~~ 161 (189)
..|.+ ..++|.|.|++||.+..- ..|.++++|.... .|. .+|++..|+|.|.|++
T Consensus 324 ~~C~~-----~~~~y~C~C~~Gy~l~~g-----~~C~dideC~~~~-------------~C~--~~C~n~~gsy~C~C~~ 378 (791)
T 3m0c_C 324 HVCND-----LKIGYECLCPDGFQLVAQ-----RRCEDIDECQDPD-------------TCS--QLCVNLEGGYKCQCEE 378 (791)
T ss_dssp SEEEE-----CSBSEEEECCTTCEEETT-----TEEECCCCCSSSS-------------SCT--TTCCBCSSCBCCCCCS
T ss_pred ccccC-----CCCCcccCCCCCCccCCC-----CccccCcccCCCC-------------CCC--CeeecCCCCceeecCC
Confidence 37887 667899999999975211 1244544443211 354 4799999999999999
Q ss_pred CCccCCc-ccCeecCCc
Q psy2457 162 GYQGDAL-SRCYPAETT 177 (189)
Q Consensus 162 G~~g~~~-~~c~~~~~~ 177 (189)
||+++.. .+|.++...
T Consensus 379 Gy~l~~~~~~C~~~~~~ 395 (791)
T 3m0c_C 379 GFQLDPHTKACKAVGSI 395 (791)
T ss_dssp SEECCSSCCCCEETTSC
T ss_pred CCEeCCCCceeeecccc
Confidence 9986443 458776543
No 59
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=97.69 E-value=1e-05 Score=64.34 Aligned_cols=69 Identities=22% Similarity=0.535 Sum_probs=15.3
Q ss_pred ccccchhh---CCCCCEEeeCCCCeeeeCCCCCccCC-CCCCcccCCCCCCC-CCCCCCCCeeecCCCCCCCCCCeeeCC
Q psy2457 27 GIRLSDSQ---CGVNSECNVRNHIPVCSCPPGYTGDP-LTQCRRFDPHDLCE-PNPCGENAKCQPGYDKSGKDRPVCTCL 101 (189)
Q Consensus 27 ~~~~c~~~---C~~~~~C~~~~~~~~C~c~~g~~~~~-~~~c~~~~~~~~c~-~~~c~~~~~C~~~~~~~~~~~~~c~c~ 101 (189)
++++|... |.+ .|.+..++|.|.|++||...+ ...| .++++|. ..+|.. .|.+ ..++|.|.|.
T Consensus 2 ~~~~C~~~~~~c~~--~C~~~~g~~~C~C~~G~~l~~~~~~C---~d~~eC~~~~~C~~--~C~~-----~~g~~~C~C~ 69 (386)
T 3v65_B 2 GEENCNVNNGGCAQ--KCQMIRGAVQCTCHTGYRLTEDGRTC---QDVNECAEEGYCSQ--GCTN-----SEGAFQCWCE 69 (386)
T ss_dssp -------------------------------------------------------CCTT--EEC----------CCEECC
T ss_pred CcCcccCCCCCCCC--CCcCCCCCcEeECCCCceECCCCCcc---CccceeCCcCcccC--cCCC-----CCCCCeEEEC
Confidence 56778654 654 898888899999999998321 1178 4789996 567765 3887 6788999999
Q ss_pred CCcccC
Q psy2457 102 PGYVGD 107 (189)
Q Consensus 102 ~g~~~~ 107 (189)
+||...
T Consensus 70 ~g~~l~ 75 (386)
T 3v65_B 70 AGYELR 75 (386)
T ss_dssp TTEEEC
T ss_pred CCceEc
Confidence 999743
No 60
>3u7u_G Neuregulin 1; signaling protein, transferase-transferase regulator complex glycosylation; HET: NAG; 3.03A {Homo sapiens}
Probab=97.64 E-value=3.6e-05 Score=43.64 Aligned_cols=38 Identities=26% Similarity=0.656 Sum_probs=31.6
Q ss_pred ccccccchhh-CCCCCEEe-----eCCCCeeeeCCCCCccCCCCCCc
Q psy2457 25 YLGIRLSDSQ-CGVNSECN-----VRNHIPVCSCPPGYTGDPLTQCR 65 (189)
Q Consensus 25 c~~~~~c~~~-C~~~~~C~-----~~~~~~~C~c~~g~~~~~~~~c~ 65 (189)
..++++|... |.++++|. ...+.|.|.|++||.|. .|+
T Consensus 5 ~~~~~eC~s~pC~NgGtC~~~~~~d~~~~y~C~C~~g~~G~---~CE 48 (55)
T 3u7u_G 5 LVKCAEKEKTFCVNGGECFMVKDLSNPSRYLCKCPNEFTGD---RCQ 48 (55)
T ss_dssp EEECCSTTTTTSCTTCEEEEECCC--CCCEEEEECTTEEST---TSC
T ss_pred cccCCCCcCCCCCCCCCcCCCCccCCCCCEeEeCCCCCcCC---CcC
Confidence 3578999888 99999995 45678999999999999 996
No 61
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=97.62 E-value=8.1e-06 Score=66.54 Aligned_cols=77 Identities=27% Similarity=0.658 Sum_probs=32.5
Q ss_pred eeeCCCCCccCCCCCCcccCCCCCCCCCCCCCCCeeecCCCCCCCCCCeeeCCCCcccCCCCcCccCCCCCCCCCCCCCc
Q psy2457 49 VCSCPPGYTGDPLTQCRRFDPHDLCEPNPCGENAKCQPGYDKSGKDRPVCTCLPGYVGDALTYCRRGECQSDAECNYDQV 128 (189)
Q Consensus 49 ~C~c~~g~~~~~~~~c~~~~~~~~c~~~~c~~~~~C~~~~~~~~~~~~~c~c~~g~~~~~~~~c~~~~c~~~~~c~~~~~ 128 (189)
...|..+|.+. .|+ .+.|.. +|.+ +.|.. ...|.|.+||.|..| +...|.
T Consensus 378 p~~C~~~~~g~---~c~----~~~C~~-~C~n-G~C~~--------~~~C~C~~G~~G~~C---~~~~C~---------- 427 (463)
T 2wg3_C 378 PEECRATVQPA---QTL----TSECSR-LCRN-GYCTP--------TGKCCCSPGWEGDFC---RTAKCE---------- 427 (463)
T ss_dssp CGGGCCCCCCC---CCC----CCHHHH-HCCS-EEECT--------TSCEEECTTEESTTS---CEECC-----------
T ss_pred cccCCCCCcCC---CCc----cccccC-CCCC-CccCC--------CCeECCCCCcCCCcC---CcCcCC----------
Confidence 45677777777 663 355643 5776 78975 368999999999863 222232
Q ss_pred cCCCeecCCccccCCCCCEeeeCCCCeeeeCCCCCccCCcc
Q psy2457 129 CNNYNCEKACTSQCGINAQCTARNHVATCSCPAGYQGDALS 169 (189)
Q Consensus 129 c~~~~c~~~c~~~C~~~~~C~~~~g~~~C~C~~G~~g~~~~ 169 (189)
.+|.++++|++. +.|.|++||+|..|.
T Consensus 428 -----------~~C~~~g~C~~~---~~C~C~~G~~G~~C~ 454 (463)
T 2wg3_C 428 -----------PACRHGGVCVRP---NKCLCKKGYLGPQCE 454 (463)
T ss_dssp -----------------------------------------
T ss_pred -----------CCCCCCCEECCC---CEEECCCCcccCCCC
Confidence 247777889764 589999999999864
No 62
>1a3p_A Epidermal growth factor; disulfide connectivities, EGF-like domain, repeat; HET: ABA; NMR {Mus musculus} SCOP: g.3.11.1
Probab=97.60 E-value=4.1e-05 Score=41.54 Aligned_cols=29 Identities=28% Similarity=0.495 Sum_probs=25.2
Q ss_pred cCCCCCEee--eCCCCeeeeCCCCCccCCcc
Q psy2457 141 QCGINAQCT--ARNHVATCSCPAGYQGDALS 169 (189)
Q Consensus 141 ~C~~~~~C~--~~~g~~~C~C~~G~~g~~~~ 169 (189)
+|.++|+|+ +..++|.|.|++||+|..+.
T Consensus 10 pC~ngg~C~~~~~~~~~~C~C~~G~~G~~Ce 40 (45)
T 1a3p_A 10 YCLNGGVXMHIESLDSYTCNCVIGYSGDRCQ 40 (45)
T ss_dssp CCSSSCEEEECTTTSSEEEECCTTEETTTTC
T ss_pred CCCCCCEEEeecCCCCEEEEcCCCCcCCcCC
Confidence 588889997 67789999999999999864
No 63
>1k36_A Epiregulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1k37_A
Probab=97.60 E-value=2.9e-05 Score=42.37 Aligned_cols=28 Identities=29% Similarity=0.541 Sum_probs=23.5
Q ss_pred cCCCCCEeeeCC--CCeeeeCCCCCccCCcc
Q psy2457 141 QCGINAQCTARN--HVATCSCPAGYQGDALS 169 (189)
Q Consensus 141 ~C~~~~~C~~~~--g~~~C~C~~G~~g~~~~ 169 (189)
+|.+ |+|+... ++|.|.|++||+|.++.
T Consensus 13 pC~n-G~C~~~~~~~~~~C~C~~GytG~~Ce 42 (46)
T 1k36_A 13 YCLH-GQCIYLVDMSQNYCRCEVGYTGVRCE 42 (46)
T ss_dssp SCSS-EEEEEETTTTEEEEEECTTCSSTTSC
T ss_pred CCCC-CEeeccCCCCCEEEECCCCCccCCCC
Confidence 6888 7998644 68999999999999964
No 64
>2jkh_L Factor X light chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_L* 2vvc_K* 2vvu_L* 2vvv_L* 2vwl_L* 2vwm_K* 2vwn_L* 2vwo_L* 2xbv_L* 2xbw_L* 2xbx_L* 2xby_L* 2xc0_L* 2xc4_L* 2xc5_L* 2gd4_L* 3kl6_B* 2y5f_L* 2y5g_L* 2y5h_L* ...
Probab=97.54 E-value=7.3e-05 Score=42.40 Aligned_cols=36 Identities=28% Similarity=0.681 Sum_probs=28.4
Q ss_pred cCCCCCEeeeCCCCeeeeCCCCCcc-CCcccCeecCCcc
Q psy2457 141 QCGINAQCTARNHVATCSCPAGYQG-DALSRCYPAETTS 178 (189)
Q Consensus 141 ~C~~~~~C~~~~g~~~C~C~~G~~g-~~~~~c~~~~~~~ 178 (189)
.|. ..|+|..|+|.|.|++||+. ....+|.++.+++
T Consensus 10 ~C~--~~C~nt~Gsy~C~C~~Gy~L~~d~~~C~didec~ 46 (55)
T 2jkh_L 10 DCD--QFCHEEQNSVVCSCARGYTLADNGKACIPTGPYP 46 (55)
T ss_dssp GCS--SEEEEETTEEEEECCTTEEECTTSSCEEESSSSC
T ss_pred CcC--cEeEcCCCCeEEeCCCCCEECCCCCeeccCcccc
Confidence 475 37999999999999999983 3334599988875
No 65
>2k2s_B Micronemal protein 6; microneme protein complex, cell adhesion, cytoplasmic vesicl lectin, virulence, EGF-like domain, membrane; NMR {Toxoplasma gondii} PDB: 2k2t_A
Probab=97.45 E-value=4.1e-05 Score=44.39 Aligned_cols=38 Identities=24% Similarity=0.449 Sum_probs=33.3
Q ss_pred ccccccchhh-CCCC--CEEeeCCCCeeeeCCCCCc-cCCCCCCc
Q psy2457 25 YLGIRLSDSQ-CGVN--SECNVRNHIPVCSCPPGYT-GDPLTQCR 65 (189)
Q Consensus 25 c~~~~~c~~~-C~~~--~~C~~~~~~~~C~c~~g~~-~~~~~~c~ 65 (189)
+.++++|... |.++ ++|++..++|.|.|++||. |. .|+
T Consensus 8 ~~~~d~C~snPC~nga~gtC~~~~g~y~C~C~~Gy~~G~---~C~ 49 (61)
T 2k2s_B 8 SETPAACSSNPCGPEAAGTCKETNSGYICRCNQGYRISL---DGT 49 (61)
T ss_dssp TTSCCHHHHCSSCSSSCCEEEECSSEEEEECCTTEEEEE---CSS
T ss_pred cCCCCcCcCCCCcCCCccccccCCCceEeECCCCCccCC---CCC
Confidence 5677889877 9887 7999999999999999999 88 784
No 66
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=97.44 E-value=0.0003 Score=61.00 Aligned_cols=68 Identities=25% Similarity=0.529 Sum_probs=50.0
Q ss_pred cccchhh---CCCCCEEeeCCCCeeeeCCCCCccCCCCCCcccCCCCCCC-CCCCCCCCeeecCCCCCCCCCCeeeCCCC
Q psy2457 28 IRLSDSQ---CGVNSECNVRNHIPVCSCPPGYTGDPLTQCRRFDPHDLCE-PNPCGENAKCQPGYDKSGKDRPVCTCLPG 103 (189)
Q Consensus 28 ~~~c~~~---C~~~~~C~~~~~~~~C~c~~g~~~~~~~~c~~~~~~~~c~-~~~c~~~~~C~~~~~~~~~~~~~c~c~~g 103 (189)
+++|... |.+ .|.+++++|.|.|++||.+.+...|+ ++++|. ..+|. ..|.+ ..++|.|.|.+|
T Consensus 312 ~~~C~~~~~~C~~--~C~~~~~~y~C~C~~Gy~l~~g~~C~---dideC~~~~~C~--~~C~n-----~~gsy~C~C~~G 379 (791)
T 3m0c_C 312 TNECLDNNGGCSH--VCNDLKIGYECLCPDGFQLVAQRRCE---DIDECQDPDTCS--QLCVN-----LEGGYKCQCEEG 379 (791)
T ss_dssp CCSTTTGGGGCSS--EEEECSBSEEEECCTTCEEETTTEEE---CCCCCSSSSSCT--TTCCB-----CSSCBCCCCCSS
T ss_pred cccccccccCccc--cccCCCCCcccCCCCCCccCCCCccc---cCcccCCCCCCC--Ceeec-----CCCCceeecCCC
Confidence 4555433 543 89999999999999999742222784 789997 33453 47887 678899999999
Q ss_pred cccC
Q psy2457 104 YVGD 107 (189)
Q Consensus 104 ~~~~ 107 (189)
|.+.
T Consensus 380 y~l~ 383 (791)
T 3m0c_C 380 FQLD 383 (791)
T ss_dssp EECC
T ss_pred CEeC
Confidence 9764
No 67
>2p28_B Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 2.20A {Homo sapiens} PDB: 1l3y_A
Probab=97.44 E-value=6.5e-05 Score=54.99 Aligned_cols=95 Identities=24% Similarity=0.623 Sum_probs=62.7
Q ss_pred CCCCCEEeeCCCCeeeeCCCCCccCCCCCCcccCCCC---------CCC----CCCCCCCCeeecCCCCCCCCCCeeeCC
Q psy2457 35 CGVNSECNVRNHIPVCSCPPGYTGDPLTQCRRFDPHD---------LCE----PNPCGENAKCQPGYDKSGKDRPVCTCL 101 (189)
Q Consensus 35 C~~~~~C~~~~~~~~C~c~~g~~~~~~~~c~~~~~~~---------~c~----~~~c~~~~~C~~~~~~~~~~~~~c~c~ 101 (189)
|..++.|.. ..|.|.+||.|. .|+ .... .|. ..+|...+.|.. ..|.|.
T Consensus 98 Csg~G~C~~----g~C~C~~G~~G~---~Ce--c~~~~~~~~~~~~~C~~~~~~~~Csg~G~C~~---------g~C~C~ 159 (217)
T 2p28_B 98 CHGKGFLEC----GICRCDTGYIGK---NCE--CQTQGRSSQELEGSCRKDNNSIICSGLGDCVC---------GQCLCH 159 (217)
T ss_dssp TTTSEEEET----TEEEECTTEEST---TSC--EECCCCC-GGGGGGGBSSTTSCBGGGTEEEET---------TEEEEC
T ss_pred cCCCceEEC----CEEECCCCccCC---ccc--ccCcccccccCCCcCCCCCCCCCCCCCCEEeC---------CceECC
Confidence 777788874 479999999999 775 2222 243 245777788874 579999
Q ss_pred CC------cccCCCCcCccCCCCCCCCCCCCCccCCCeecCCccccCCCC--CEeeeCCCCeeeeCCCCCccCCcc
Q psy2457 102 PG------YVGDALTYCRRGECQSDAECNYDQVCNNYNCEKACTSQCGIN--AQCTARNHVATCSCPAGYQGDALS 169 (189)
Q Consensus 102 ~g------~~~~~~~~c~~~~c~~~~~c~~~~~c~~~~c~~~c~~~C~~~--~~C~~~~g~~~C~C~~G~~g~~~~ 169 (189)
+| |.|..++ +....|.. .. ..+|..+ |+|.. + .|.|.+||+|..+.
T Consensus 160 ~gw~~~~~~~G~~Ce-~~~~~C~~------~~-----------g~~C~~~~~G~C~~--g--~C~C~~G~~G~~C~ 213 (217)
T 2p28_B 160 TSDVPGKLIYGQYCE-CDTINCER------YN-----------GQVCGGPGRGLCFC--G--KCRCHPGFEGSACQ 213 (217)
T ss_dssp CCCSTTCCEESTTSC-EESSCSCE------ET-----------TEETTCTTTEEEET--T--EEEECTTEESTTSC
T ss_pred CCCCCcccEECCCcc-cCCccCCC------CC-----------CCCCCCCCCcEEeC--C--eeECCCCCccCCcC
Confidence 99 5676532 11122221 00 0147776 89975 2 89999999999864
No 68
>1egf_A Epidermal growth factor; NMR {Mus musculus} SCOP: g.3.11.1 PDB: 1epg_A 1eph_A 1epi_A 1epj_A 3egf_A 1gk5_A
Probab=97.43 E-value=0.00027 Score=39.64 Aligned_cols=36 Identities=28% Similarity=0.547 Sum_probs=29.6
Q ss_pred ccccchh----hCCCCCEEe--eCCCCeeeeCCCCCccCCCCCCc
Q psy2457 27 GIRLSDS----QCGVNSECN--VRNHIPVCSCPPGYTGDPLTQCR 65 (189)
Q Consensus 27 ~~~~c~~----~C~~~~~C~--~~~~~~~C~c~~g~~~~~~~~c~ 65 (189)
++++|.. +|.++++|+ +..++|.|.|++||.|. .|+
T Consensus 2 ~i~~C~~~~~~pC~ngg~C~~~~~~~~~~C~C~~G~~G~---~Ce 43 (53)
T 1egf_A 2 SYPGCPSSYDGYCLNGGVCMHIESLDSYTCNCVIGYSGD---RCQ 43 (53)
T ss_dssp EECCCCTTSSCSSCSSCEEEEESSSSCEEEECCTTCCSS---SSC
T ss_pred CcccCCCCCCCcCCCCcEEEeeCCCCCEEEECCCCCcCC---cCC
Confidence 4566655 388889999 67789999999999998 886
No 69
>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens}
Probab=97.38 E-value=4.4e-06 Score=57.50 Aligned_cols=49 Identities=33% Similarity=0.631 Sum_probs=39.0
Q ss_pred eeeeCCCCCc---cCCCCCCcccCCCCCCCC--CCCCCCCeeecCCCCCCCCCCeeeCCCCcccCC
Q psy2457 48 PVCSCPPGYT---GDPLTQCRRFDPHDLCEP--NPCGENAKCQPGYDKSGKDRPVCTCLPGYVGDA 108 (189)
Q Consensus 48 ~~C~c~~g~~---~~~~~~c~~~~~~~~c~~--~~c~~~~~C~~~~~~~~~~~~~c~c~~g~~~~~ 108 (189)
|.|.|++||. +. .|+ ++++|.. .+|.+ ++|++ ..++|.|.|++||.+..
T Consensus 88 ~~C~C~~Gy~~~~g~---~C~---dideC~~~~~~C~~-g~C~n-----~~g~y~C~C~~Gy~g~~ 141 (147)
T 2w86_A 88 VDPICGKGYSRIKGT---QCE---DIDECEVFPGVCKN-GLCVN-----TRGSFKCQCPSGMTLDA 141 (147)
T ss_dssp CCTTTCTTEEEEETT---EEE---ECCHHHHSTTCSSS-SEEEE-----ETTEEEEECCTTCCBCT
T ss_pred CcccCCCccccCCCC---ccC---ccccccCCCCCCCC-CEEEC-----CCCCEEeeCCCCCccCC
Confidence 6789999996 55 784 6888874 44875 59998 66889999999998764
No 70
>1nql_B Epidermal growth factor; cell surface receptor, tyrosine kinase, glycoprotein, endoso growth factor, auto-inhibition; HET: NAG BMA; 2.80A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ivo_C* 2kv4_A 1jl9_A 1p9j_A 3njp_C*
Probab=97.36 E-value=7.2e-05 Score=42.09 Aligned_cols=29 Identities=24% Similarity=0.586 Sum_probs=25.6
Q ss_pred cCCCCCEee--eCCCCeeeeCCCCCccCCcc
Q psy2457 141 QCGINAQCT--ARNHVATCSCPAGYQGDALS 169 (189)
Q Consensus 141 ~C~~~~~C~--~~~g~~~C~C~~G~~g~~~~ 169 (189)
+|.++|+|+ +..++|.|.|++||+|.++.
T Consensus 13 pC~nGG~C~~~~~~~~~~C~C~~GytG~~Ce 43 (53)
T 1nql_B 13 YCLHDGVCMYIEALDKYACNCVVGYIGERCQ 43 (53)
T ss_dssp EECTTCEEEEETTTTEEEEEECTTEESTTSC
T ss_pred CCCCCeEEeeecCCCCEEEecCCCCcCCCCC
Confidence 688899998 66788999999999999974
No 71
>2kl7_A Fibulin-4; secreted, calcium, disease mutation, disulfide bond, EGF- like domain, glycoprotein, polymorphism, structural genomics, PSI-2; NMR {Homo sapiens}
Probab=97.36 E-value=9.3e-05 Score=44.32 Aligned_cols=24 Identities=17% Similarity=0.231 Sum_probs=18.6
Q ss_pred cCCCCCEeeeCCCCeeee-CCCCCc
Q psy2457 141 QCGINAQCTARNHVATCS-CPAGYQ 164 (189)
Q Consensus 141 ~C~~~~~C~~~~g~~~C~-C~~G~~ 164 (189)
+|..+++|+|..|+|+|. +..||.
T Consensus 12 ~C~~~~~C~Nt~Gsy~C~~~~~g~~ 36 (71)
T 2kl7_A 12 ACKGEMKCINHYGGYLCLPRSAAVI 36 (71)
T ss_dssp SCTTEEEEEETTCCEEEEETTSCCC
T ss_pred CCCCCCEeECCCCCeEecccCCccc
Confidence 587778999999999999 234444
No 72
>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A
Probab=97.27 E-value=6.7e-05 Score=52.81 Aligned_cols=53 Identities=28% Similarity=0.767 Sum_probs=29.3
Q ss_pred CeeeeCCCCCccCCCCCCcccCCCCCCCC-CCCCCCCeeecCCCCCCCCCCeeeCCCCcccCC
Q psy2457 47 IPVCSCPPGYTGDPLTQCRRFDPHDLCEP-NPCGENAKCQPGYDKSGKDRPVCTCLPGYVGDA 108 (189)
Q Consensus 47 ~~~C~c~~g~~~~~~~~c~~~~~~~~c~~-~~c~~~~~C~~~~~~~~~~~~~c~c~~g~~~~~ 108 (189)
.+.|.|.+||.+. .|+ .++++|.. .+|.++++|++ ...+++.|.|++||.|..
T Consensus 113 ~~~C~C~~G~~G~---~C~--~~~~~C~~~~~C~~~g~C~~----~~~~~~~C~C~~G~~G~~ 166 (169)
T 2vj2_A 113 PWQCLCETNWGGQ---LCD--KDLNYCGTHQPCLNGGTCSN----TGPDKYQCSCPEGYSGPN 166 (169)
T ss_dssp TTCCEECTTEETT---TTC--EESCHHHHTCCCCTTCEEEE----CSTTCEEEECCTTCCSTT
T ss_pred CCEEeCCCCCCCC---ccc--CCCCCCCCCCCCCCCCEEcC----CCCCCcEeECCCCCcCcC
Confidence 4556666666665 553 24455542 55666666654 013456666666666654
No 73
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.23 E-value=0.00077 Score=57.65 Aligned_cols=70 Identities=26% Similarity=0.566 Sum_probs=52.1
Q ss_pred ccccchhh---CCCCCEEeeCCCCeeeeCCCCCccCCCCCCcccCCCCCCC-CCCCCCCCeeecCCCCCCCCCCeeeCCC
Q psy2457 27 GIRLSDSQ---CGVNSECNVRNHIPVCSCPPGYTGDPLTQCRRFDPHDLCE-PNPCGENAKCQPGYDKSGKDRPVCTCLP 102 (189)
Q Consensus 27 ~~~~c~~~---C~~~~~C~~~~~~~~C~c~~g~~~~~~~~c~~~~~~~~c~-~~~c~~~~~C~~~~~~~~~~~~~c~c~~ 102 (189)
++++|... |. ..|.+.+++|.|.|++||.+.....| .++++|. ..+|. ..|.+ ..++|.|.|.+
T Consensus 293 ~~~eC~~~~~~C~--~~C~~~~~~~~C~C~~G~~~~~~~~C---~dideC~~~~~C~--~~C~n-----~~g~y~C~C~~ 360 (699)
T 1n7d_A 293 GTNECLDNNGGCS--HVCNDLKIGYECLCPDGFQLVAQRRC---EDIDECQDPDTCS--QLCVN-----LEGGYKCQCEE 360 (699)
T ss_dssp CCCCTTSSTTTSC--TTCCCCTTCCCCCCCSSSCCCSSSCC---CCCCCCSSSSSCT--TTCCB-----CSSCBCCCCCS
T ss_pred ccccccccccCcC--CCcccCCCCcEEeCCCCeEcCCCCcc---cCccccCCCCccc--ccccc-----CCCCeeeeeec
Confidence 35566543 54 37999999999999999985322378 4789997 45675 36887 67889999999
Q ss_pred CcccCC
Q psy2457 103 GYVGDA 108 (189)
Q Consensus 103 g~~~~~ 108 (189)
||.+..
T Consensus 361 G~~~~~ 366 (699)
T 1n7d_A 361 GFQLDP 366 (699)
T ss_dssp SCBCCS
T ss_pred ccccCC
Confidence 998643
No 74
>1hae_A Heregulin-alpha; growth factor; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1haf_A 1hre_A 1hrf_A
Probab=97.21 E-value=0.00025 Score=41.31 Aligned_cols=41 Identities=24% Similarity=0.622 Sum_probs=32.2
Q ss_pred ccchhh-CCCCCEEee-----CCCCeeeeCCCCCccCCCCCCcccCCCCCCC
Q psy2457 29 RLSDSQ-CGVNSECNV-----RNHIPVCSCPPGYTGDPLTQCRRFDPHDLCE 74 (189)
Q Consensus 29 ~~c~~~-C~~~~~C~~-----~~~~~~C~c~~g~~~~~~~~c~~~~~~~~c~ 74 (189)
++|... |.++++|++ ..++|.|.|++||.|. .|+ ..++++.
T Consensus 7 ~~C~~~pC~ngG~C~~~~~~~~~~~y~C~C~~Gf~G~---~Ce--~~i~~~~ 53 (63)
T 1hae_A 7 AEKEKTFCVNGGECFMVKDLSNPSRYLCKCQPGFTGA---RCT--ENVPMKV 53 (63)
T ss_dssp CHHHHTTSCTTCEEEEEESSSSSCCEEEECCTTEEST---TSC--EECCSSC
T ss_pred CCCCCCcCCCCcEEecCCccCCCCCEEEECCCCCcCC---ccC--cCcCccc
Confidence 566655 998999997 5678999999999999 896 4455543
No 75
>3ca7_A Protein spitz; argos, EGF, developmental protein, differentiation, EGF-like domain, endoplasmic reticulum, glycoprotein, golgi apparatus; 1.50A {Drosophila melanogaster} PDB: 3c9a_C 3ltg_D
Probab=97.20 E-value=0.00016 Score=40.48 Aligned_cols=29 Identities=31% Similarity=0.660 Sum_probs=23.4
Q ss_pred cCCCCCEeee----CCCCeeeeCCCCCccCCcc
Q psy2457 141 QCGINAQCTA----RNHVATCSCPAGYQGDALS 169 (189)
Q Consensus 141 ~C~~~~~C~~----~~g~~~C~C~~G~~g~~~~ 169 (189)
+|.++|+|++ ..++|.|.|++||+|.++.
T Consensus 15 pC~NGGtC~~~~~~~~~~y~C~C~~Gf~G~~Ce 47 (52)
T 3ca7_A 15 YCLNDAHCFAVKIADLPVYSCECAIGFMGQRCE 47 (52)
T ss_dssp TSCTTCEEEEEEETTEEEEEEECCTTEESTTSC
T ss_pred cCCCCCEEecCccCCCCCEEEECCCCCcCCCCc
Confidence 4667788986 3568999999999999864
No 76
>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B*
Probab=97.08 E-value=0.00057 Score=58.11 Aligned_cols=81 Identities=28% Similarity=0.655 Sum_probs=55.6
Q ss_pred CCCCCEEeeCCCCeeeeCC------CCCccCCCCCCcccCCCCCCCC---CCCCC--CCeeecCCCCCCCCCCeeeCCCC
Q psy2457 35 CGVNSECNVRNHIPVCSCP------PGYTGDPLTQCRRFDPHDLCEP---NPCGE--NAKCQPGYDKSGKDRPVCTCLPG 103 (189)
Q Consensus 35 C~~~~~C~~~~~~~~C~c~------~g~~~~~~~~c~~~~~~~~c~~---~~c~~--~~~C~~~~~~~~~~~~~c~c~~g 103 (189)
|.+++.|.. + .|.|. +||.|. .|+ .+...|.. .+|.. .+.|.. ..|.|.+|
T Consensus 484 Cs~~G~C~~--G--~C~C~~~~~~~~G~~G~---~Ce--~~~~~C~~~~~~~C~~~~~G~C~~---------g~C~C~~G 545 (687)
T 3k6s_B 484 CSGLGDCVC--G--QCLCHTSDVPGKLIYGQ---YCE--CDTINCERYNGQVCGGPGRGLCFC---------GKCRCHPG 545 (687)
T ss_dssp GGSSEEEET--T--EEEECCCCSTTCCEEST---TSC--EESSCSCEETTEETSHHHHEEEET---------TEEEECTT
T ss_pred CCCCCEEeC--C--EEEcCCCCCCCCCcccc---ccc--cccccccCCCCcCcCCCCCCeEEC---------CEEEcCCC
Confidence 777889973 2 89999 999999 885 34567763 35776 788875 48999999
Q ss_pred cccCCCCcCc--cCCCCC--CCCCCCCCccCCCee
Q psy2457 104 YVGDALTYCR--RGECQS--DAECNYDQVCNNYNC 134 (189)
Q Consensus 104 ~~~~~~~~c~--~~~c~~--~~~c~~~~~c~~~~c 134 (189)
|.|..++ |. ...|.. ...|..+.+|..++|
T Consensus 546 ~~G~~Ce-c~~~~~~C~~~~g~~Cs~~G~C~~g~C 579 (687)
T 3k6s_B 546 FEGSACQ-CERTTEGCLNPRRVECSGRGRCRCNVC 579 (687)
T ss_dssp CCSTTSC-SCCSSCTTBCTTCSBTSSSCCBCSSCB
T ss_pred CcCCCCc-cCCCCCCCCCCCCCCCCCCCcCCCCEE
Confidence 9999865 22 234442 134555555655555
No 77
>1kli_L Factor VIIA; extrinsic coagulation pathway, serine protease activation, R drug design, substrate-assisted catalysis, hydrolase; 1.69A {Homo sapiens} SCOP: g.3.11.1 PDB: 1klj_L 1jbu_L 1ygc_L*
Probab=97.05 E-value=0.00054 Score=40.68 Aligned_cols=36 Identities=22% Similarity=0.535 Sum_probs=28.0
Q ss_pred cCCCCCEeeeCCC-CeeeeCCCCCcc-CCcccCeecCCcc
Q psy2457 141 QCGINAQCTARNH-VATCSCPAGYQG-DALSRCYPAETTS 178 (189)
Q Consensus 141 ~C~~~~~C~~~~g-~~~C~C~~G~~g-~~~~~c~~~~~~~ 178 (189)
.|.+ .|++..| +|.|.|++||.. ..-.+|.++.+|.
T Consensus 14 gC~h--~C~n~~g~s~~C~C~~Gy~L~~D~~tC~d~dec~ 51 (69)
T 1kli_L 14 GCEQ--YCSDHTGTKRSCRCHEGYSLLADGVSCTPTVEYP 51 (69)
T ss_dssp GCSS--EEEEETTTEEEEECCTTEEECTTSSCEEECSSSC
T ss_pred CcCC--EeEcCCCCCEEEeCCCCCeECCCCCcccCccccc
Confidence 3653 7999998 799999999983 3445699988765
No 78
>1apq_A Complement protease C1R; EGF, calcium binding, serine protease; NMR {Homo sapiens} SCOP: g.3.11.1
Probab=97.03 E-value=0.00049 Score=38.42 Aligned_cols=25 Identities=32% Similarity=0.611 Sum_probs=21.1
Q ss_pred cCCCCCEeeeCCCCeeeeCCCCCccCC
Q psy2457 141 QCGINAQCTARNHVATCSCPAGYQGDA 167 (189)
Q Consensus 141 ~C~~~~~C~~~~g~~~C~C~~G~~g~~ 167 (189)
+|. ++|++..|+|.|.|++||++..
T Consensus 21 ~C~--~~C~n~~Gsy~C~C~~Gy~~~~ 45 (53)
T 1apq_A 21 QCQ--HLCHNYVGGYFCSCRPGYELQE 45 (53)
T ss_dssp TTS--SEEEEETTEEEEECSTTCEECT
T ss_pred CCC--CEeECCCCCeEEECCCCCeECC
Confidence 365 4899999999999999998644
No 79
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=97.01 E-value=0.00019 Score=58.54 Aligned_cols=62 Identities=32% Similarity=0.806 Sum_probs=26.5
Q ss_pred cccchhhCCCCCEEeeCCCCeeeeCCCCCccCCCCCCcccCCCCCCCCCCCCCCCeeecCCCCCCCCCCeeeCCCCcccC
Q psy2457 28 IRLSDSQCGVNSECNVRNHIPVCSCPPGYTGDPLTQCRRFDPHDLCEPNPCGENAKCQPGYDKSGKDRPVCTCLPGYVGD 107 (189)
Q Consensus 28 ~~~c~~~C~~~~~C~~~~~~~~C~c~~g~~~~~~~~c~~~~~~~~c~~~~c~~~~~C~~~~~~~~~~~~~c~c~~g~~~~ 107 (189)
.+.|..+|.+ +.|... ..|.|.+||.+. .|+ ++.|.. +|.+++.|.. .+.|.|.+||.|.
T Consensus 392 ~~~C~~~C~n-G~C~~~---~~C~C~~G~~G~---~C~----~~~C~~-~C~~~g~C~~--------~~~C~C~~G~~G~ 451 (463)
T 2wg3_C 392 TSECSRLCRN-GYCTPT---GKCCCSPGWEGD---FCR----TAKCEP-ACRHGGVCVR--------PNKCLCKKGYLGP 451 (463)
T ss_dssp CCHHHHHCCS-EEECTT---SCEEECTTEEST---TSC----EECC----------------------------------
T ss_pred cccccCCCCC-CccCCC---CeECCCCCcCCC---cCC----cCcCCC-CCCCCCEECC--------CCEEECCCCcccC
Confidence 4567655876 799753 479999999999 894 467865 8998899985 3789999999998
Q ss_pred CC
Q psy2457 108 AL 109 (189)
Q Consensus 108 ~~ 109 (189)
.|
T Consensus 452 ~C 453 (463)
T 2wg3_C 452 QC 453 (463)
T ss_dssp --
T ss_pred CC
Confidence 64
No 80
>1g1s_A P-selectin; selectin, lectin, EGF, sulphated, SLEX, immune system, membr protein; HET: TYS SIA GAL NAG FUC NGA; 1.90A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1g1r_A* 1g1q_A* 1fsb_A
Probab=96.92 E-value=0.00039 Score=48.25 Aligned_cols=33 Identities=27% Similarity=0.670 Sum_probs=28.1
Q ss_pred CCccc-cCCCCCEeeeCCCCeeeeCCCCCccCCc
Q psy2457 136 KACTS-QCGINAQCTARNHVATCSCPAGYQGDAL 168 (189)
Q Consensus 136 ~~c~~-~C~~~~~C~~~~g~~~C~C~~G~~g~~~ 168 (189)
++|.. +|.++++|.+..++|.|+|++||.|..|
T Consensus 120 ~~c~~~~C~~~g~C~~~~~~~~c~C~~g~~G~~C 153 (162)
T 1g1s_A 120 ASCQDMSCSKQGECLETIGNYTCSCYPGFYGPEC 153 (162)
T ss_dssp CCCCTTGGGGSEEEEECSSSEEEEECTTEESTTS
T ss_pred CCCcCCCCCCCCEEecCCCCceEeCCCCCcCccc
Confidence 44544 6888899999999999999999999875
No 81
>1klo_A Laminin; glycoprotein; 2.10A {Mus musculus} SCOP: g.3.11.2 g.3.11.2 g.3.11.2 PDB: 1npe_B 1tle_A
Probab=96.88 E-value=0.0016 Score=45.41 Aligned_cols=117 Identities=25% Similarity=0.606 Sum_probs=62.0
Q ss_pred CCCCCEEeeCC--CCeee-eCCCCCccCCCCCCcccCC------C------CCCCCCCCCCC------CeeecCCCCCCC
Q psy2457 35 CGVNSECNVRN--HIPVC-SCPPGYTGDPLTQCRRFDP------H------DLCEPNPCGEN------AKCQPGYDKSGK 93 (189)
Q Consensus 35 C~~~~~C~~~~--~~~~C-~c~~g~~~~~~~~c~~~~~------~------~~c~~~~c~~~------~~C~~~~~~~~~ 93 (189)
|.++++|.... +.+.| .|..+|.|. .|+.-.. . ..|..=.|... +.|..
T Consensus 3 C~~~g~C~~~~~~g~~~C~~C~~g~~G~---~Ce~C~~g~~g~~~~~~~~~~~C~~C~C~~~~~~~~~~~C~~------- 72 (162)
T 1klo_A 3 CPGGSSCAIVPKTKEVVCTHCPTGTAGK---RCELCDDGYFGDPLGSNGPVRLCRPCQCNDNIDPNAVGNCNR------- 72 (162)
T ss_dssp SCTTCCEEECSSSCCEEECSCCTTEEST---TSCEECTTEEEETTCTTSSCEEEEECCSTTCBCTTCSCCBCT-------
T ss_pred CcCcCcccccCCCCCEEeCCCCCCCcCC---CCcCCCCCCcCCcccccCCCCCCeeCcCCCCCCcccCCcccC-------
Confidence 55667887654 56789 699999888 7742100 0 01111112222 23432
Q ss_pred CCCeee-CCCCcccCCCCcCccCCCCCCCCCCCCCccCCCeecCCccc-cCCCCC------EeeeCCCCeeeeCCCCCcc
Q psy2457 94 DRPVCT-CLPGYVGDALTYCRRGECQSDAECNYDQVCNNYNCEKACTS-QCGINA------QCTARNHVATCSCPAGYQG 165 (189)
Q Consensus 94 ~~~~c~-c~~g~~~~~~~~c~~~~c~~~~~c~~~~~c~~~~c~~~c~~-~C~~~~------~C~~~~g~~~C~C~~G~~g 165 (189)
....|. |.++|.|..++.|.+..- ...+.... .+.|.. .|...+ +|....| .|.|++||+|
T Consensus 73 ~tG~C~~C~~g~~G~~Ce~C~~Gy~--g~~~~~~~-------~~~C~~C~C~~~Gs~~~~~~Cd~~tG--~C~C~~g~~G 141 (162)
T 1klo_A 73 LTGECLKCIYNTAGFYCDRCKEGFF--GNPLAPNP-------ADKCKACACNPYGTVQQQSSCNPVTG--QCQCLPHVSG 141 (162)
T ss_dssp TTCCBCCBCTTEETTTTCEECTTEE--ECTTCSSG-------GGSEEECCCCTTTBGGGCCCCCTTTC--CCCBCTTEES
T ss_pred CCCcccCCCCCCcCCCcCcCchhhc--CCccccCC-------CCCCeeccCCCCCccCCCCCCCCCCC--EeECCCCCcC
Confidence 235684 999998888654332100 00111000 122333 455543 5654444 7999999999
Q ss_pred CCcccCe
Q psy2457 166 DALSRCY 172 (189)
Q Consensus 166 ~~~~~c~ 172 (189)
..+..|.
T Consensus 142 ~~Cd~C~ 148 (162)
T 1klo_A 142 RDCGTCD 148 (162)
T ss_dssp TTCCEEC
T ss_pred CCCCCCC
Confidence 9986554
No 82
>1k36_A Epiregulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1k37_A
Probab=96.86 E-value=0.00046 Score=37.49 Aligned_cols=35 Identities=31% Similarity=0.617 Sum_probs=27.8
Q ss_pred ccccchh---h-CCCCCEEeeCC--CCeeeeCCCCCccCCCCCCc
Q psy2457 27 GIRLSDS---Q-CGVNSECNVRN--HIPVCSCPPGYTGDPLTQCR 65 (189)
Q Consensus 27 ~~~~c~~---~-C~~~~~C~~~~--~~~~C~c~~g~~~~~~~~c~ 65 (189)
++++|.. . |.+ ++|+... +.|.|.|++||+|. .|+
T Consensus 2 ~i~~C~~~~~~pC~n-G~C~~~~~~~~~~C~C~~GytG~---~Ce 42 (46)
T 1k36_A 2 SITKCSSDMNGYCLH-GQCIYLVDMSQNYCRCEVGYTGV---RCE 42 (46)
T ss_dssp CEECCCTTCCSSCSS-EEEEEETTTTEEEEEECTTCSST---TSC
T ss_pred ccccCCCCCCCCCCC-CEeeccCCCCCEEEECCCCCccC---CCC
Confidence 4566765 4 887 8998744 67999999999999 885
No 83
>3ltf_D Protein spitz; receptor-ligand complex ectodomain cysteine rich domain EGF ATP-binding, kinase, nucleotide-binding, receptor; HET: NAG MAN; 3.20A {Drosophila melanogaster}
Probab=96.82 E-value=0.00042 Score=39.67 Aligned_cols=29 Identities=28% Similarity=0.628 Sum_probs=24.2
Q ss_pred cCCCCCEee--e--CCCCeeeeCCCCCccCCcc
Q psy2457 141 QCGINAQCT--A--RNHVATCSCPAGYQGDALS 169 (189)
Q Consensus 141 ~C~~~~~C~--~--~~g~~~C~C~~G~~g~~~~ 169 (189)
+|.++|+|+ . ..+.|.|.|++||+|.++.
T Consensus 15 pC~NGGtC~~~~~~~~~~~~C~C~~Gf~G~~Ce 47 (58)
T 3ltf_D 15 YCLNDAHCFAVKIADLPVYSCECAIGFMGQRCE 47 (58)
T ss_dssp TSCSSCEEEEEEETTEEEEEEEECTTEESSSSC
T ss_pred cCCCCCEEeCCccCCCCCEEeECCCCCccCCCc
Confidence 588889997 3 4457899999999999974
No 84
>1gl4_A Nidogen-1, entactin; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: d.22.1.2 g.3.11.5 PDB: 1h4u_A
Probab=96.81 E-value=0.00049 Score=52.08 Aligned_cols=35 Identities=29% Similarity=0.722 Sum_probs=31.2
Q ss_pred cCCCCCEeeeCCCCeeeeCCCCCccCCcccCeecCC
Q psy2457 141 QCGINAQCTARNHVATCSCPAGYQGDALSRCYPAET 176 (189)
Q Consensus 141 ~C~~~~~C~~~~g~~~C~C~~G~~g~~~~~c~~~~~ 176 (189)
+|..++.|+|..|+|.|.|++||.|++.. |.+++.
T Consensus 14 ~C~~~a~C~Nt~Gsy~C~C~~Gy~GnG~~-C~d~d~ 48 (285)
T 1gl4_A 14 QCSVHAECRDYATGFCCRCVANYTGNGRQ-CVAEGS 48 (285)
T ss_dssp GSCTTEEEEECSSCEEEEECTTEEECSSS-EEETTC
T ss_pred CCCCCCEeEcCCCCeEEEcCCCCCCCCCc-CCCCCC
Confidence 58888999999999999999999988875 888766
No 85
>4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A {Mus musculus}
Probab=96.75 E-value=0.00091 Score=55.32 Aligned_cols=99 Identities=16% Similarity=0.339 Sum_probs=29.7
Q ss_pred eCCCCCccCCCCCCcccCCCCCCCCCCCCCCCeeecCCCCCCCCCCeeeCCCCcccCCCCcCccCCCCCCCCCCCCCccC
Q psy2457 51 SCPPGYTGDPLTQCRRFDPHDLCEPNPCGENAKCQPGYDKSGKDRPVCTCLPGYVGDALTYCRRGECQSDAECNYDQVCN 130 (189)
Q Consensus 51 ~c~~g~~~~~~~~c~~~~~~~~c~~~~c~~~~~C~~~~~~~~~~~~~c~c~~g~~~~~~~~c~~~~c~~~~~c~~~~~c~ 130 (189)
.|.+||.+. .+. ....|..-+|...+.|.+... =....+.|.|.+||.|..++.|.+..-.. ...
T Consensus 422 ~C~~Gy~G~---~c~---~~~~C~~C~C~~~gtc~~~~~-Cd~~tg~C~C~~g~~G~~Ce~C~~G~~g~---~~~----- 486 (525)
T 4aqs_A 422 VCKEGFYDL---SAE---DPYGCKSCACNPLGTIPGGNP-CDSETGYCYCKRLVTGQRCDQCLPQHWGL---SND----- 486 (525)
T ss_dssp EECTTEECC---CTT---STTSSEECCCCTTTBCCSSCC-BCTTTCCBCBCTTCCSTTTCC-------------------
T ss_pred CCCCCCcCC---CCC---CCCCCccCCCCCCceecCCCc-ccCCCCEEECCCCCcCCCcccCCCCccCC---CCC-----
Confidence 566666665 442 234454445555444432000 00124679999999998865433211000 000
Q ss_pred CCeecCCccc-cCCCCCEeeeC--CCCeeeeCCCCCccCCc
Q psy2457 131 NYNCEKACTS-QCGINAQCTAR--NHVATCSCPAGYQGDAL 168 (189)
Q Consensus 131 ~~~c~~~c~~-~C~~~~~C~~~--~g~~~C~C~~G~~g~~~ 168 (189)
++.|.. +|.+++.+... ...+.|.|++||+|..+
T Consensus 487 ----~~~C~~C~C~~~gs~~~~C~~~tG~C~C~~G~~G~~C 523 (525)
T 4aqs_A 487 ----LDGCRPCDCDLGGALNNSCSEDSGQCSCLPHMIGRQC 523 (525)
T ss_dssp -----------------------------------------
T ss_pred ----CCCCcCCCCCCCCccCCccCCCCCeeECCCCCcCCCC
Confidence 234444 56666554332 22347999999999885
No 86
>1a3p_A Epidermal growth factor; disulfide connectivities, EGF-like domain, repeat; HET: ABA; NMR {Mus musculus} SCOP: g.3.11.1
Probab=96.75 E-value=0.002 Score=34.68 Aligned_cols=35 Identities=23% Similarity=0.370 Sum_probs=25.7
Q ss_pred CCCCC---CCCCCCeeecCCCCCCCCCCeeeCCCCcccCCC
Q psy2457 72 LCEPN---PCGENAKCQPGYDKSGKDRPVCTCLPGYVGDAL 109 (189)
Q Consensus 72 ~c~~~---~c~~~~~C~~~~~~~~~~~~~c~c~~g~~~~~~ 109 (189)
+|... ||.++++|..+ ...+.|.|.|++||.|..+
T Consensus 2 ~C~~~~~~pC~ngg~C~~~---~~~~~~~C~C~~G~~G~~C 39 (45)
T 1a3p_A 2 GXPSSYDGYCLNGGVXMHI---ESLDSYTCNCVIGYSGDRC 39 (45)
T ss_dssp CCTTCCSSCCSSSCEEEEC---TTTSSEEEECCTTEETTTT
T ss_pred CcccCCCCCCCCCCEEEee---cCCCCEEEEcCCCCcCCcC
Confidence 34445 89999999720 1446799999999999863
No 87
>1kig_L Factor XA; glycoprotein, serine protease, plasma, blood coagulation, complex (protease/inhibitor); 3.00A {Bos taurus} SCOP: g.3.11.1
Probab=96.69 E-value=0.00053 Score=38.12 Aligned_cols=32 Identities=28% Similarity=0.580 Sum_probs=26.1
Q ss_pred EeeeCCCCeeeeCCCCCcc-CCcccCeecCCcc
Q psy2457 147 QCTARNHVATCSCPAGYQG-DALSRCYPAETTS 178 (189)
Q Consensus 147 ~C~~~~g~~~C~C~~G~~g-~~~~~c~~~~~~~ 178 (189)
.|++..|+|.|.|++||+. ..-.+|.++++++
T Consensus 11 ~C~n~~gs~~C~C~~Gy~L~~d~~tC~dide~p 43 (51)
T 1kig_L 11 FCREERSEVRCSCAHGYVLGDDSKSCVSTERFP 43 (51)
T ss_dssp CCCEETTEECCCCCTTEEECTTSSCEEECSSSC
T ss_pred EeEcCCCCeEEeCCCCcEECCCCCccccCCccc
Confidence 5889999999999999983 3335699998876
No 88
>2bz6_L Blood coagulation factor VIIA; serine protease, enzyme complex, hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: g.3.11.1 PDB: 1w8b_L* 1w7x_L* 1cvw_L*
Probab=96.47 E-value=0.002 Score=36.02 Aligned_cols=32 Identities=22% Similarity=0.521 Sum_probs=25.9
Q ss_pred EeeeCCC-CeeeeCCCCCcc-CCcccCeecCCcc
Q psy2457 147 QCTARNH-VATCSCPAGYQG-DALSRCYPAETTS 178 (189)
Q Consensus 147 ~C~~~~g-~~~C~C~~G~~g-~~~~~c~~~~~~~ 178 (189)
.|++..+ +|.|.|++||+. ..-.+|.++++++
T Consensus 12 ~C~n~~ggs~~C~C~~Gy~L~~Dg~tC~d~dec~ 45 (53)
T 2bz6_L 12 YCSDHTGTKRSCRCHEGYSLLADGVSCTPTVEYP 45 (53)
T ss_dssp EEEEETTTEEEEECCTTEEECTTSSCEEECSSSC
T ss_pred EeEcCCCCCEEeeCCCCCEECCCCCcccCCcccc
Confidence 6999988 799999999983 3335699998875
No 89
>2kl7_A Fibulin-4; secreted, calcium, disease mutation, disulfide bond, EGF- like domain, glycoprotein, polymorphism, structural genomics, PSI-2; NMR {Homo sapiens}
Probab=96.30 E-value=0.0025 Score=37.95 Aligned_cols=33 Identities=12% Similarity=0.148 Sum_probs=25.1
Q ss_pred ccccchhh---CCCCCEEeeCCCCeeee-CCCCCccC
Q psy2457 27 GIRLSDSQ---CGVNSECNVRNHIPVCS-CPPGYTGD 59 (189)
Q Consensus 27 ~~~~c~~~---C~~~~~C~~~~~~~~C~-c~~g~~~~ 59 (189)
++++|... |..++.|+|+.++|.|. +..||.+.
T Consensus 2 DidEC~~~~~~C~~~~~C~Nt~Gsy~C~~~~~g~~~~ 38 (71)
T 2kl7_A 2 DVNECLTIPEACKGEMKCINHYGGYLCLPRSAAVIND 38 (71)
T ss_dssp CSCCTTCCCCSCTTEEEEEETTCCEEEEETTSCCCSC
T ss_pred ccccccCCCCCCCCCCEeECCCCCeEecccCCccccc
Confidence 57778653 87777999999999997 45677654
No 90
>1apq_A Complement protease C1R; EGF, calcium binding, serine protease; NMR {Homo sapiens} SCOP: g.3.11.1
Probab=96.24 E-value=0.0027 Score=35.23 Aligned_cols=23 Identities=35% Similarity=0.693 Sum_probs=20.4
Q ss_pred CCCCCEEeeCCCCeeeeCCCCCccC
Q psy2457 35 CGVNSECNVRNHIPVCSCPPGYTGD 59 (189)
Q Consensus 35 C~~~~~C~~~~~~~~C~c~~g~~~~ 59 (189)
|. ..|+++.++|.|.|++||.+.
T Consensus 22 C~--~~C~n~~Gsy~C~C~~Gy~~~ 44 (53)
T 1apq_A 22 CQ--HLCHNYVGGYFCSCRPGYELQ 44 (53)
T ss_dssp TS--SEEEEETTEEEEECSTTCEEC
T ss_pred CC--CEeECCCCCeEEECCCCCeEC
Confidence 75 399999999999999999865
No 91
>1gl4_A Nidogen-1, entactin; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: d.22.1.2 g.3.11.5 PDB: 1h4u_A
Probab=96.23 E-value=0.0017 Score=49.16 Aligned_cols=39 Identities=31% Similarity=0.623 Sum_probs=30.3
Q ss_pred cccccchhh---CCCCCEEeeCCCCeeeeCCCCCccCCCCCCc
Q psy2457 26 LGIRLSDSQ---CGVNSECNVRNHIPVCSCPPGYTGDPLTQCR 65 (189)
Q Consensus 26 ~~~~~c~~~---C~~~~~C~~~~~~~~C~c~~g~~~~~~~~c~ 65 (189)
.|+++|... |..++.|+|+.++|.|.|.+||.+.+. .|.
T Consensus 3 ~DiDEC~~~~~~C~~~a~C~Nt~Gsy~C~C~~Gy~GnG~-~C~ 44 (285)
T 1gl4_A 3 LAQQTCANNRHQCSVHAECRDYATGFCCRCVANYTGNGR-QCV 44 (285)
T ss_dssp ----CHHHHGGGSCTTEEEEECSSCEEEEECTTEEECSS-SEE
T ss_pred ccchhccCCCCCCCCCCEeEcCCCCeEEEcCCCCCCCCC-cCC
Confidence 468899754 988889999999999999999997765 684
No 92
>2wph_E Coagulation factor IXA light chain; serine protease, zymogen, hydrolase, glycoprotein, hydroxylation, phosphoprotein, sulfation, hemostasis; HET: DPN 1PE; 1.50A {Homo sapiens} PDB: 2wpi_E* 2wpj_E* 2wpk_E* 2wpl_E* 2wpm_E 3kcg_L* 3lc3_B* 1rfn_B* 3lc5_B*
Probab=96.03 E-value=0.0068 Score=34.63 Aligned_cols=32 Identities=28% Similarity=0.631 Sum_probs=25.1
Q ss_pred EeeeCC-CCeeeeCCCCCcc-CCcccCeecCCcc
Q psy2457 147 QCTARN-HVATCSCPAGYQG-DALSRCYPAETTS 178 (189)
Q Consensus 147 ~C~~~~-g~~~C~C~~G~~g-~~~~~c~~~~~~~ 178 (189)
.|++.. |+|.|.|++||.. ..-.+|.++..++
T Consensus 12 ~C~n~~~gs~~C~C~~Gy~L~~D~~tC~d~~~~p 45 (59)
T 2wph_E 12 FCKNSADNKVVCSCTEGYRLAENQKSCEPAVPFP 45 (59)
T ss_dssp EEEECSTTCEEEECCTTEEECTTSSCEEESSSSC
T ss_pred EeEeCCCCCEEeeCCCCcEECCCCCcccCCCCCC
Confidence 699988 6999999999983 3335688887654
No 93
>1kli_L Factor VIIA; extrinsic coagulation pathway, serine protease activation, R drug design, substrate-assisted catalysis, hydrolase; 1.69A {Homo sapiens} SCOP: g.3.11.1 PDB: 1klj_L 1jbu_L 1ygc_L*
Probab=95.93 E-value=0.0047 Score=36.53 Aligned_cols=43 Identities=19% Similarity=0.339 Sum_probs=30.6
Q ss_pred cccccchhh---CCCCCEEeeCCC-CeeeeCCCCCccCC-CCCCcccCCCCCC
Q psy2457 26 LGIRLSDSQ---CGVNSECNVRNH-IPVCSCPPGYTGDP-LTQCRRFDPHDLC 73 (189)
Q Consensus 26 ~~~~~c~~~---C~~~~~C~~~~~-~~~C~c~~g~~~~~-~~~c~~~~~~~~c 73 (189)
.|+++|... |.+ .|+++.+ +|.|.|+.||.... .+.|. +++++
T Consensus 3 ~d~~eC~~~nggC~h--~C~n~~g~s~~C~C~~Gy~L~~D~~tC~---d~dec 50 (69)
T 1kli_L 3 DDQLICVNENGGCEQ--YCSDHTGTKRSCRCHEGYSLLADGVSCT---PTVEY 50 (69)
T ss_dssp SCCCCTTSGGGGCSS--EEEEETTTEEEEECCTTEEECTTSSCEE---ECSSS
T ss_pred cccccccCCCCCcCC--EeEcCCCCCEEEeCCCCCeECCCCCccc---Ccccc
Confidence 467788644 876 8999998 89999999998542 22563 44544
No 94
>2jkh_L Factor X light chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_L* 2vvc_K* 2vvu_L* 2vvv_L* 2vwl_L* 2vwm_K* 2vwn_L* 2vwo_L* 2xbv_L* 2xbw_L* 2xbx_L* 2xby_L* 2xc0_L* 2xc4_L* 2xc5_L* 2gd4_L* 3kl6_B* 2y5f_L* 2y5g_L* 2y5h_L* ...
Probab=95.82 E-value=0.0052 Score=34.52 Aligned_cols=34 Identities=32% Similarity=0.632 Sum_probs=24.8
Q ss_pred CCCCCEEeeCCCCeeeeCCCCCccCC-CCCCcccCCCCCC
Q psy2457 35 CGVNSECNVRNHIPVCSCPPGYTGDP-LTQCRRFDPHDLC 73 (189)
Q Consensus 35 C~~~~~C~~~~~~~~C~c~~g~~~~~-~~~c~~~~~~~~c 73 (189)
|.+ .|++++++|.|.|++||.... ...|+ ++++|
T Consensus 11 C~~--~C~nt~Gsy~C~C~~Gy~L~~d~~~C~---didec 45 (55)
T 2jkh_L 11 CDQ--FCHEEQNSVVCSCARGYTLADNGKACI---PTGPY 45 (55)
T ss_dssp CSS--EEEEETTEEEEECCTTEEECTTSSCEE---ESSSS
T ss_pred cCc--EeEcCCCCeEEeCCCCCEECCCCCeec---cCccc
Confidence 764 899999999999999998532 12563 45554
No 95
>1nql_B Epidermal growth factor; cell surface receptor, tyrosine kinase, glycoprotein, endoso growth factor, auto-inhibition; HET: NAG BMA; 2.80A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ivo_C* 2kv4_A 1jl9_A 1p9j_A 3njp_C*
Probab=95.66 E-value=0.0044 Score=34.62 Aligned_cols=28 Identities=29% Similarity=0.748 Sum_probs=24.4
Q ss_pred CCCCCEEe--eCCCCeeeeCCCCCccCCCCCCc
Q psy2457 35 CGVNSECN--VRNHIPVCSCPPGYTGDPLTQCR 65 (189)
Q Consensus 35 C~~~~~C~--~~~~~~~C~c~~g~~~~~~~~c~ 65 (189)
|.++++|+ ...++|.|.|++||+|. .|+
T Consensus 14 C~nGG~C~~~~~~~~~~C~C~~GytG~---~Ce 43 (53)
T 1nql_B 14 CLHDGVCMYIEALDKYACNCVVGYIGE---RCQ 43 (53)
T ss_dssp ECTTCEEEEETTTTEEEEEECTTEEST---TSC
T ss_pred CCCCeEEeeecCCCCEEEecCCCCcCC---CCC
Confidence 88889998 45678999999999999 895
No 96
>2fd6_A Urokinase-type plasminogen activator; UPAR, ATF, ATN-615 antibody, FAB, ternary complex, immune SY hydrolase; HET: PGE NAG FUC NDG PG4; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 3bt2_A* 3bt1_A* 3u73_A* 1urk_A* 3laq_A* 1kdu_A
Probab=95.58 E-value=0.015 Score=38.39 Aligned_cols=29 Identities=21% Similarity=0.605 Sum_probs=23.8
Q ss_pred cCCCCCEeeeCC--CCe-eeeCCCCCccCCcc
Q psy2457 141 QCGINAQCTARN--HVA-TCSCPAGYQGDALS 169 (189)
Q Consensus 141 ~C~~~~~C~~~~--g~~-~C~C~~G~~g~~~~ 169 (189)
+|.++++|.+.. .+| .|.|++||+|..+.
T Consensus 2 pC~nggtC~~~~~~~~~~~C~Cp~g~~G~~Ce 33 (122)
T 2fd6_A 2 DCLNGGTCVSNKYFSNIHWCNCPKKFGGQHCE 33 (122)
T ss_dssp CCCSSCEEEECTTTTTCEEEECCTTEESTTSC
T ss_pred CCCCcCCcCCCcccCCCCCccCCCCCCCcccc
Confidence 478889998874 556 99999999999875
No 97
>3cfw_A L-selectin; EGF, cell adhesion, EGF-like domain, glycoprotein, membrane, sushi, transmembrane; HET: NAG MAN BMA; 2.20A {Homo sapiens}
Probab=95.40 E-value=0.0094 Score=41.18 Aligned_cols=35 Identities=23% Similarity=0.510 Sum_probs=26.9
Q ss_pred cCCCCCEeeeCCCCeeeeCCCCCccCCcccCeecCCcc
Q psy2457 141 QCGINAQCTARNHVATCSCPAGYQGDALSRCYPAETTS 178 (189)
Q Consensus 141 ~C~~~~~C~~~~g~~~C~C~~G~~g~~~~~c~~~~~~~ 178 (189)
.|..+++|.+..++|.|+|.+||.|..| ..+..|+
T Consensus 126 ~C~~~g~C~~~~~~~~c~C~~g~~g~~C---~~~~~c~ 160 (164)
T 3cfw_A 126 SCSGHGECVEIINNYTCNCDVGYYGPQC---QFVQVDP 160 (164)
T ss_dssp SSCSSEEEEEETTEEEEEECTTCBSSSS---CBC----
T ss_pred cCCCCCeecccCCCceeeeCCCcccccc---cccccCc
Confidence 5888899999999999999999999885 4444443
No 98
>3zyj_B Netrin-G1; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=95.27 E-value=0.011 Score=47.28 Aligned_cols=74 Identities=19% Similarity=0.490 Sum_probs=20.8
Q ss_pred CCCeeeCCCCcccCCCCcCccC----CCCCCCCC----CCCCccCCCee---cCCccc---cCCCCCEeeeCCCCeeeeC
Q psy2457 94 DRPVCTCLPGYVGDALTYCRRG----ECQSDAEC----NYDQVCNNYNC---EKACTS---QCGINAQCTARNHVATCSC 159 (189)
Q Consensus 94 ~~~~c~c~~g~~~~~~~~c~~~----~c~~~~~c----~~~~~c~~~~c---~~~c~~---~C~~~~~C~~~~g~~~C~C 159 (189)
+.+.|.|..++.|..++.|.+. ++.....+ .....|....| .+.|.. +|.++++|.+.. .|.|
T Consensus 311 g~~~C~C~~~ttG~~CE~C~pgy~~~P~~~gt~~p~~~g~~~~C~pC~Cn~~g~~CD~~t~~C~ngg~C~~~~---~C~C 387 (426)
T 3zyj_B 311 SKLTCECEHNTTGPDCGKCKKNYQGRPWSPGSYLPIPKGAANACIPSISSIGTNVCDNELLHCQNGGTCHNNV---RCLC 387 (426)
T ss_dssp TEEEECCCTTEESSSSCEECTTCCSSCCCCCBCCSSSSCBCCCCCCCCC-------------------------------
T ss_pred CCceeeCCCCCcCCCccccccccccCcccCCcccccCCCCCCcccCCCCCCCcCccccCcccCCCCCCcCCCC---CCcC
Confidence 4578999999999987766432 23221110 01111222222 234433 788889998765 8999
Q ss_pred CCCCccCCccc
Q psy2457 160 PAGYQGDALSR 170 (189)
Q Consensus 160 ~~G~~g~~~~~ 170 (189)
++||.|..|..
T Consensus 388 ~~G~~G~~Ce~ 398 (426)
T 3zyj_B 388 PAAYTGILCEK 398 (426)
T ss_dssp -----------
T ss_pred CCCCcCCCCcC
Confidence 99999988753
No 99
>1iox_A Betacellulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1ip0_A
Probab=95.16 E-value=0.0096 Score=32.76 Aligned_cols=28 Identities=25% Similarity=0.692 Sum_probs=22.0
Q ss_pred cCCCCCEee--eCCCCeeeeCCCCCccCCcc
Q psy2457 141 QCGINAQCT--ARNHVATCSCPAGYQGDALS 169 (189)
Q Consensus 141 ~C~~~~~C~--~~~g~~~C~C~~G~~g~~~~ 169 (189)
.|.+ |+|. ...+.+.|.|++||+|+++.
T Consensus 15 yC~n-G~C~~~~~~~~~~C~C~~gy~G~RCe 44 (50)
T 1iox_A 15 YCIK-GRCRFVVAEQTPSCVCDEGYIGARCE 44 (50)
T ss_dssp SCTT-CCEEEETTTTEEEECCCTTEETTTTC
T ss_pred cccC-CEEEeEcCCCCeEEECCCCcccCCCC
Confidence 4766 6785 45567899999999999974
No 100
>2i9a_A Urokinase-type plasminogen activator; growth factor-like domain, kringle domain, hydrolase; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 2i9b_A*
Probab=95.13 E-value=0.021 Score=38.89 Aligned_cols=29 Identities=21% Similarity=0.560 Sum_probs=23.7
Q ss_pred cCCCCCEeeeC--CCCe-eeeCCCCCccCCcc
Q psy2457 141 QCGINAQCTAR--NHVA-TCSCPAGYQGDALS 169 (189)
Q Consensus 141 ~C~~~~~C~~~--~g~~-~C~C~~G~~g~~~~ 169 (189)
+|.++++|+.. ..++ +|.|++||.|+.+.
T Consensus 14 pC~NGGtC~~~~~~s~~~~C~Cp~g~~G~~Ce 45 (145)
T 2i9a_A 14 DCLNGGTCVSNKYFSNIHWCNCPKKFGGQHCE 45 (145)
T ss_dssp CCCTTCEEEECSSSTTCEEEECCTTEESTTSC
T ss_pred CCCCCCCcCCCccccCCccccCCCCCCCCcee
Confidence 58889999765 3556 89999999999975
No 101
>2rnl_A Amphiregulin; AR, colorectum cell-derived growth factor, EGF-like domain, CRDGF, cytokine, glycoprotein, membrane, polymorphism, transmembrane; NMR {Homo sapiens}
Probab=94.89 E-value=0.026 Score=30.97 Aligned_cols=28 Identities=25% Similarity=0.612 Sum_probs=22.0
Q ss_pred cCCCCCEee--eCCCCeeeeCCCCCccCCcc
Q psy2457 141 QCGINAQCT--ARNHVATCSCPAGYQGDALS 169 (189)
Q Consensus 141 ~C~~~~~C~--~~~g~~~C~C~~G~~g~~~~ 169 (189)
.|.+ |+|. ...+.+.|.|+.||+|+++.
T Consensus 19 yC~n-G~C~~i~~~~~~~C~C~~gy~G~RCe 48 (50)
T 2rnl_A 19 FCIH-GECKYIEHLEAVTCKCQQEYFGERCG 48 (50)
T ss_dssp TCSS-SEEEEETTTTEEEEECCSSCCSSSCC
T ss_pred cCCC-CEEEEecCCCCeeEECCCCccccccc
Confidence 4776 5896 44567899999999999963
No 102
>3e50_C Protransforming growth factor alpha; IDE, TGF-alpha, cytoplasm, hydrolase, metal-binding, metalloprotease, polymorphism, protease, zinc; 2.30A {Homo sapiens} SCOP: g.3.11.1 PDB: 1yuf_A 1yug_A 2tgf_A 1mox_C 3tgf_A 4tgf_A
Probab=94.89 E-value=0.028 Score=30.83 Aligned_cols=28 Identities=25% Similarity=0.622 Sum_probs=22.1
Q ss_pred cCCCCCEeee--CCCCeeeeCCCCCccCCcc
Q psy2457 141 QCGINAQCTA--RNHVATCSCPAGYQGDALS 169 (189)
Q Consensus 141 ~C~~~~~C~~--~~g~~~C~C~~G~~g~~~~ 169 (189)
.|.++ +|.. ....+.|.|++||+|+++.
T Consensus 15 yC~nG-~C~~~~~~~~~~C~C~~gy~G~RCe 44 (50)
T 3e50_C 15 FCFHG-TCRFLVQEDKPACVCHSGYVGARCE 44 (50)
T ss_pred cccCC-EEeeccCCCCeEEECCCCCcccCCC
Confidence 47765 8864 4467899999999999974
No 103
>1g1s_A P-selectin; selectin, lectin, EGF, sulphated, SLEX, immune system, membr protein; HET: TYS SIA GAL NAG FUC NGA; 1.90A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1g1r_A* 1g1q_A* 1fsb_A
Probab=94.78 E-value=0.0096 Score=41.06 Aligned_cols=39 Identities=26% Similarity=0.502 Sum_probs=29.5
Q ss_pred cchhh-CCCCCEEeeCCCCeeeeCCCCCccCCCCCCcccCCCCCCC
Q psy2457 30 LSDSQ-CGVNSECNVRNHIPVCSCPPGYTGDPLTQCRRFDPHDLCE 74 (189)
Q Consensus 30 ~c~~~-C~~~~~C~~~~~~~~C~c~~g~~~~~~~~c~~~~~~~~c~ 74 (189)
+|... |.++++|.+..++|.|.|++||.|. .|+ .+++|.
T Consensus 121 ~c~~~~C~~~g~C~~~~~~~~c~C~~g~~G~---~Ce---~~~~c~ 160 (162)
T 1g1s_A 121 SCQDMSCSKQGECLETIGNYTCSCYPGFYGP---ECE---YVRDDD 160 (162)
T ss_dssp CCCTTGGGGSEEEEECSSSEEEEECTTEEST---TSC---EECC--
T ss_pred CCcCCCCCCCCEEecCCCCceEeCCCCCcCc---ccc---cCcccC
Confidence 34434 7677899999999999999999998 895 445664
No 104
>3ca7_A Protein spitz; argos, EGF, developmental protein, differentiation, EGF-like domain, endoplasmic reticulum, glycoprotein, golgi apparatus; 1.50A {Drosophila melanogaster} PDB: 3c9a_C 3ltg_D
Probab=94.69 E-value=0.017 Score=32.00 Aligned_cols=28 Identities=25% Similarity=0.769 Sum_probs=23.9
Q ss_pred CCCCCEEee----CCCCeeeeCCCCCccCCCCCCc
Q psy2457 35 CGVNSECNV----RNHIPVCSCPPGYTGDPLTQCR 65 (189)
Q Consensus 35 C~~~~~C~~----~~~~~~C~c~~g~~~~~~~~c~ 65 (189)
|.++++|++ ..++|.|.|+.||.|. .|+
T Consensus 16 C~NGGtC~~~~~~~~~~y~C~C~~Gf~G~---~Ce 47 (52)
T 3ca7_A 16 CLNDAHCFAVKIADLPVYSCECAIGFMGQ---RCE 47 (52)
T ss_dssp SCTTCEEEEEEETTEEEEEEECCTTEEST---TSC
T ss_pred CCCCCEEecCccCCCCCEEEECCCCCcCC---CCc
Confidence 888899986 3457899999999999 885
No 105
>1g1t_A E-selectin; EGF, adhesion molecule, SLEX, immune system, membrane protein; HET: SIA GAL MAG FUC; 1.50A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1esl_A
Probab=94.62 E-value=0.011 Score=40.50 Aligned_cols=34 Identities=29% Similarity=0.698 Sum_probs=28.6
Q ss_pred CCccc-cCCCCCEeeeCCCCeeeeCCCCCccCCcc
Q psy2457 136 KACTS-QCGINAQCTARNHVATCSCPAGYQGDALS 169 (189)
Q Consensus 136 ~~c~~-~C~~~~~C~~~~g~~~C~C~~G~~g~~~~ 169 (189)
++|.. +|.+.+.|.+....|.|.|.+||+|+.|.
T Consensus 120 ~~~~~~pc~~~g~C~~~~~~~~c~C~~g~~g~~Ce 154 (157)
T 1g1t_A 120 AACTNTSCSGHGECVETINNYTCKCDPGFSGLKCE 154 (157)
T ss_dssp CCCCTTGGGGSEEEEEETTEEEEEECTTEESTTSC
T ss_pred CCCCCCCCCCCCEeecCCCCeeEECCCCccCcccc
Confidence 34444 68888999999999999999999999874
No 106
>1ob1_C Major merozoite surface protein; immune system, immunoglobulin/complex, immunoglobulin, antib fragment, MSP1-19, EGF-like domain; 2.90A {Plasmodium falciparum} SCOP: g.3.11.4 g.3.11.4 PDB: 1cej_A 2flg_A
Probab=94.04 E-value=0.11 Score=32.74 Aligned_cols=69 Identities=26% Similarity=0.663 Sum_probs=44.8
Q ss_pred CCCCCCCCCCeeecCCCCCCCCCCeeeCCCCcccCCCCcCcc---CCCCCCCCCCCCCccCCCeecCCccccCCCCCEee
Q psy2457 73 CEPNPCGENAKCQPGYDKSGKDRPVCTCLPGYVGDALTYCRR---GECQSDAECNYDQVCNNYNCEKACTSQCGINAQCT 149 (189)
Q Consensus 73 c~~~~c~~~~~C~~~~~~~~~~~~~c~c~~g~~~~~~~~c~~---~~c~~~~~c~~~~~c~~~~c~~~c~~~C~~~~~C~ 149 (189)
|....|...+.|.+ ...+...|+|..||.++... |.+ ..|... + .-|..+|+|.
T Consensus 7 C~~~~C~~NA~C~r----~~~g~e~C~C~~gy~gdg~~-Cv~~~~~sC~~n----N--------------GGCd~nA~C~ 63 (99)
T 1ob1_C 7 CVKKQCPQNSGCFR----HLDEREECKCLLNYKQEGDK-CVENPNPTCNEN----N--------------GGCDADAKCT 63 (99)
T ss_dssp CCSCCCCTTEEEEC----CTTSCCEEEECTTEEEETTE-EEECSCCCSTTG----G--------------GGCCTTEEEE
T ss_pred eccCCCCCCCCeEE----cCCCCEEEEecCCeecCCCe-EeeCCCCChhhc----C--------------CCcCCCceeE
Confidence 33455666778864 24577899999999986522 322 133321 0 0388889997
Q ss_pred eCC-----CCeeeeCCCCCc
Q psy2457 150 ARN-----HVATCSCPAGYQ 164 (189)
Q Consensus 150 ~~~-----g~~~C~C~~G~~ 164 (189)
... +...|.|.+||.
T Consensus 64 ~~~~~~~~~ki~C~C~~g~~ 83 (99)
T 1ob1_C 64 EEDSGSNGKKITCECTKPDS 83 (99)
T ss_dssp CCSCSSSSCCCEEEECSTTC
T ss_pred ecCCcccCCceEeEeCCCCc
Confidence 663 578999999874
No 107
>1xdt_R Hbegf, heparin-binding epidermal growth factor; complex (toxin-growth factor), diphtheria toxin, receptor, H binding epidermal growth factor; 2.65A {Homo sapiens} SCOP: g.3.11.1
Probab=93.80 E-value=0.018 Score=34.73 Aligned_cols=28 Identities=25% Similarity=0.695 Sum_probs=21.1
Q ss_pred cCCCCCEee--eCCCCeeeeCCCCCccCCcc
Q psy2457 141 QCGINAQCT--ARNHVATCSCPAGYQGDALS 169 (189)
Q Consensus 141 ~C~~~~~C~--~~~g~~~C~C~~G~~g~~~~ 169 (189)
.|.++ +|. ...+.+.|.|++||+|++|.
T Consensus 47 yClnG-~C~~i~~~~~~~C~C~~GYtG~RCE 76 (79)
T 1xdt_R 47 FCIHG-ECKYVKELRAPSCICHPGYHGERCH 76 (79)
T ss_dssp CCSSE-EECCBGGGTBCCEEECTTEESTTCC
T ss_pred cCCCC-EeeeecCCCCeEEEcCCCccccccc
Confidence 46664 784 33467899999999999964
No 108
>2ygo_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: MLY PCF NAG; 1.85A {Homo sapiens} PDB: 2ygp_A*
Probab=93.59 E-value=0.049 Score=38.51 Aligned_cols=29 Identities=28% Similarity=0.879 Sum_probs=23.0
Q ss_pred ccccCCCCCEeeeCCCCeeeeCCCCCccCCcc
Q psy2457 138 CTSQCGINAQCTARNHVATCSCPAGYQGDALS 169 (189)
Q Consensus 138 c~~~C~~~~~C~~~~g~~~C~C~~G~~g~~~~ 169 (189)
|...|.++|.|+. ++ .|.|++||.|..|.
T Consensus 151 C~~~C~ngG~Cv~-P~--~C~C~~Gw~G~~C~ 179 (188)
T 2ygo_A 151 CPGGCRNGGFCNE-RR--ICECPDGFHGPHCE 179 (188)
T ss_dssp CTTCCCTTCEECT-TS--CEECCTTCBTTTTC
T ss_pred cCCCCCCCCEeCC-CC--cccCcCCCCCCCCc
Confidence 4346999999974 22 79999999999974
No 109
>1q4g_A Prostaglandin G/H synthase 1; cyclooxygenase, non-steroidal anti-inflammatory drug, peroxi prostaglandin synthase, EGF-like domain; HET: BOG NAG NDG BMA MAN BFL HEM; 2.00A {Ovis aries} SCOP: a.93.1.2 g.3.11.1 PDB: 1diy_A* 2ayl_A* 3kk6_A* 3n8v_A* 3n8w_A* 3n8x_A* 3n8y_A* 3n8z_A* 2oyu_P* 2oye_P* 1eqg_A* 1cqe_A* 1eqh_A* 1igz_A* 1igx_A* 1fe2_A* 1pge_A* 1pgf_A* 1pgg_A* 3n8w_B* ...
Probab=93.20 E-value=0.056 Score=44.95 Aligned_cols=35 Identities=23% Similarity=0.529 Sum_probs=31.2
Q ss_pred cccchhh-CCCCCEEee-CCCCeeeeCC-CCCccCCCCCCc
Q psy2457 28 IRLSDSQ-CGVNSECNV-RNHIPVCSCP-PGYTGDPLTQCR 65 (189)
Q Consensus 28 ~~~c~~~-C~~~~~C~~-~~~~~~C~c~-~g~~~~~~~~c~ 65 (189)
+++|... |.++++|.+ ..++|.|.|. +||.|. .|+
T Consensus 2 ~d~C~~~PC~ngG~C~~~~~~~y~C~C~~~G~~G~---~Ce 39 (553)
T 1q4g_A 2 VNPCCYYPCQHQGICVRFGLDRYQCDCTRTGYSGP---NCT 39 (553)
T ss_dssp CCGGGGCCCCTTCEEEEETTTEEEEECTTSSEETT---TTC
T ss_pred CCcCCCCCCCCCCCcCCCCCCceEeeCCCCCcCCC---CCC
Confidence 4678777 999999999 7889999999 999999 896
No 110
>1szb_A Mannose binding lectin-associated serine protease-2 related protein, MAP19 (19KDA)...; calcium, complement, innate immunity, CUB, EGF; 2.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=93.02 E-value=0.063 Score=37.28 Aligned_cols=31 Identities=29% Similarity=0.555 Sum_probs=23.2
Q ss_pred CCCCCEeeeCCCCeeeeCCCCCccCC-cccCeec
Q psy2457 142 CGINAQCTARNHVATCSCPAGYQGDA-LSRCYPA 174 (189)
Q Consensus 142 C~~~~~C~~~~g~~~C~C~~G~~g~~-~~~c~~~ 174 (189)
|.+ .|.+..|+|.|.|++||+... ..+|.++
T Consensus 137 C~~--~C~n~~g~~~C~C~~Gy~l~~d~~~C~~~ 168 (170)
T 1szb_A 137 CDH--HCHNHLGGFYCSCRAGYVLHRNKRTCSEQ 168 (170)
T ss_dssp SSS--EEEEETTEEEEECCTTEEECTTSSCEEEC
T ss_pred cCC--ccccCCCCEEEeCCCCcEECCCCCccccc
Confidence 654 799999999999999998332 2346654
No 111
>1n1i_A Merozoite surface protein-1; MSP1, malaria, surface antigen, glycoprotein, EGF domain, cell adhesion; HET: HIS; 2.40A {Plasmodium knowlesi strain H} SCOP: g.3.11.4 g.3.11.4
Probab=92.92 E-value=0.54 Score=29.81 Aligned_cols=72 Identities=22% Similarity=0.444 Sum_probs=46.4
Q ss_pred CCCCCCCCCCCCeeecCCCCCCCCCCeeeCCCCcccCCCCcCccCCCCCCCC-CCCCCccCCCeecCCccccCCCCCEee
Q psy2457 71 DLCEPNPCGENAKCQPGYDKSGKDRPVCTCLPGYVGDALTYCRRGECQSDAE-CNYDQVCNNYNCEKACTSQCGINAQCT 149 (189)
Q Consensus 71 ~~c~~~~c~~~~~C~~~~~~~~~~~~~c~c~~g~~~~~~~~c~~~~c~~~~~-c~~~~~c~~~~c~~~c~~~C~~~~~C~ 149 (189)
..|....|...+.|.. ...+...|+|..||.++... |..++. |... ..-|..+|.|.
T Consensus 11 h~C~~t~Cp~NA~C~r----~~~G~e~CrCl~gY~~dg~~------Cv~~Np~C~~n------------NGGCd~nAeC~ 68 (105)
T 1n1i_A 11 HKCIDTNVPENAACYR----YLDGTEEWRCLLGFKEVGGK------CVPASITCEEN------------NGGCAPEAECT 68 (105)
T ss_dssp TSCCSSCCCTTEEEEE----CTTSCEEEEECTTEEECSSS------EEECCCCTTSG------------GGGSCTTSEEE
T ss_pred cEecCCCCCCCCCeEE----CCCCCEeEEEECCeeccCCE------EEECCcchhhc------------CCCcCCCcEeE
Confidence 3444455667788865 24567889999999987532 222111 2210 00488899998
Q ss_pred eCC-CCeeeeCCCCCc
Q psy2457 150 ARN-HVATCSCPAGYQ 164 (189)
Q Consensus 150 ~~~-g~~~C~C~~G~~ 164 (189)
... ....|.|..+|.
T Consensus 69 ~~~~~ki~C~C~~~~~ 84 (105)
T 1n1i_A 69 MDDKKEVECKCTKEGS 84 (105)
T ss_dssp ECTTSCEEEECCSTTC
T ss_pred ECCCCEEEeECCCCCC
Confidence 774 688999998863
No 112
>3ltf_D Protein spitz; receptor-ligand complex ectodomain cysteine rich domain EGF ATP-binding, kinase, nucleotide-binding, receptor; HET: NAG MAN; 3.20A {Drosophila melanogaster}
Probab=92.87 E-value=0.043 Score=31.10 Aligned_cols=28 Identities=25% Similarity=0.769 Sum_probs=23.4
Q ss_pred CCCCCEEee----CCCCeeeeCCCCCccCCCCCCc
Q psy2457 35 CGVNSECNV----RNHIPVCSCPPGYTGDPLTQCR 65 (189)
Q Consensus 35 C~~~~~C~~----~~~~~~C~c~~g~~~~~~~~c~ 65 (189)
|.++++|+. ..+.+.|.|++||.|. .|+
T Consensus 16 C~NGGtC~~~~~~~~~~~~C~C~~Gf~G~---~Ce 47 (58)
T 3ltf_D 16 CLNDAHCFAVKIADLPVYSCECAIGFMGQ---RCE 47 (58)
T ss_dssp SCSSCEEEEEEETTEEEEEEEECTTEESS---SSC
T ss_pred CCCCCEEeCCccCCCCCEEeECCCCCccC---CCc
Confidence 888899983 3456899999999999 895
No 113
>1klo_A Laminin; glycoprotein; 2.10A {Mus musculus} SCOP: g.3.11.2 g.3.11.2 g.3.11.2 PDB: 1npe_B 1tle_A
Probab=92.81 E-value=0.11 Score=35.97 Aligned_cols=33 Identities=27% Similarity=0.696 Sum_probs=21.0
Q ss_pred CCCCCCeeecCCCCCCCCCCee-eCCCCcccCCCCcC
Q psy2457 77 PCGENAKCQPGYDKSGKDRPVC-TCLPGYVGDALTYC 112 (189)
Q Consensus 77 ~c~~~~~C~~~~~~~~~~~~~c-~c~~g~~~~~~~~c 112 (189)
||.+++.|.. ....+.+.| .|+++|.|..++.|
T Consensus 2 ~C~~~g~C~~---~~~~g~~~C~~C~~g~~G~~Ce~C 35 (162)
T 1klo_A 2 PCPGGSSCAI---VPKTKEVVCTHCPTGTAGKRCELC 35 (162)
T ss_dssp CSCTTCCEEE---CSSSCCEEECSCCTTEESTTSCEE
T ss_pred cCcCcCcccc---cCCCCCEEeCCCCCCCcCCCCcCC
Confidence 3556677764 011245788 69999999886644
No 114
>2p28_B Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 2.20A {Homo sapiens} PDB: 1l3y_A
Probab=92.72 E-value=0.046 Score=39.84 Aligned_cols=57 Identities=30% Similarity=0.666 Sum_probs=42.9
Q ss_pred CCCCCEEeeCCCCeeeeCCCC------CccCCCCCCcccCCCCCCCCC---CCCCC--CeeecCCCCCCCCCCeeeCCCC
Q psy2457 35 CGVNSECNVRNHIPVCSCPPG------YTGDPLTQCRRFDPHDLCEPN---PCGEN--AKCQPGYDKSGKDRPVCTCLPG 103 (189)
Q Consensus 35 C~~~~~C~~~~~~~~C~c~~g------~~~~~~~~c~~~~~~~~c~~~---~c~~~--~~C~~~~~~~~~~~~~c~c~~g 103 (189)
|..++.|+. ..|.|.+| |.|. .|+ .+...|... +|... +.|.. ..|.|.+|
T Consensus 145 Csg~G~C~~----g~C~C~~gw~~~~~~~G~---~Ce--~~~~~C~~~~g~~C~~~~~G~C~~---------g~C~C~~G 206 (217)
T 2p28_B 145 CSGLGDCVC----GQCLCHTSDVPGKLIYGQ---YCE--CDTINCERYNGQVCGGPGRGLCFC---------GKCRCHPG 206 (217)
T ss_dssp GGGTEEEET----TEEEECCCCSTTCCEEST---TSC--EESSCSCEETTEETTCTTTEEEET---------TEEEECTT
T ss_pred CCCCCEEeC----CceECCCCCCCcccEECC---Ccc--cCCccCCCCCCCCCCCCCCcEEeC---------CeeECCCC
Confidence 777788873 37999999 5788 885 345667643 68766 88875 48999999
Q ss_pred cccCCC
Q psy2457 104 YVGDAL 109 (189)
Q Consensus 104 ~~~~~~ 109 (189)
|.|..+
T Consensus 207 ~~G~~C 212 (217)
T 2p28_B 207 FEGSAC 212 (217)
T ss_dssp EESTTS
T ss_pred CccCCc
Confidence 999864
No 115
>3asi_A Neurexin-1-alpha; beta-sandwich, cell adhesion, synapse maturation, neuroligin glycosylation, membrane; HET: NAG; 2.30A {Bos taurus}
Probab=92.26 E-value=0.1 Score=41.47 Aligned_cols=34 Identities=18% Similarity=0.575 Sum_probs=29.6
Q ss_pred CCccc-cCCCCCEeeeCCCCeeeeCCC-CCccCCcc
Q psy2457 136 KACTS-QCGINAQCTARNHVATCSCPA-GYQGDALS 169 (189)
Q Consensus 136 ~~c~~-~C~~~~~C~~~~g~~~C~C~~-G~~g~~~~ 169 (189)
+.|.. +|.++++|+.....|.|.|+. ||.|..|.
T Consensus 186 ~~C~~~pC~n~g~C~~~~~~~~C~C~~~~~~G~~C~ 221 (410)
T 3asi_A 186 TTCQEDSCSNQGVCLQQWDGFSCDCSMTSFSGPLCN 221 (410)
T ss_dssp SCCCTTSSSTTCEEEECSSSEEEECTTTSEESTTSC
T ss_pred CCcccccCCCCCEecCCCCCceEeccCCcccCCCCC
Confidence 56766 899999999999999999996 99998864
No 116
>4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A {Mus musculus}
Probab=92.20 E-value=0.068 Score=44.10 Aligned_cols=58 Identities=26% Similarity=0.603 Sum_probs=13.7
Q ss_pred CCeeeeCCCCCccCCCCCCccc--------CCCCCCCCCCCCCCCeeecCCCCCCCCCCeeeCCCCcccCCC
Q psy2457 46 HIPVCSCPPGYTGDPLTQCRRF--------DPHDLCEPNPCGENAKCQPGYDKSGKDRPVCTCLPGYVGDAL 109 (189)
Q Consensus 46 ~~~~C~c~~g~~~~~~~~c~~~--------~~~~~c~~~~c~~~~~C~~~~~~~~~~~~~c~c~~g~~~~~~ 109 (189)
....|.|.+||.|. .|+.- ..++.|..-+|...+.+... -....+.|.|.+||.|..+
T Consensus 458 ~tg~C~C~~g~~G~---~Ce~C~~G~~g~~~~~~~C~~C~C~~~gs~~~~---C~~~tG~C~C~~G~~G~~C 523 (525)
T 4aqs_A 458 ETGYCYCKRLVTGQ---RCDQCLPQHWGLSNDLDGCRPCDCDLGGALNNS---CSEDSGQCSCLPHMIGRQC 523 (525)
T ss_dssp TTCCBCBCTTCCST---TTCC---------------------------------------------------
T ss_pred CCCEEECCCCCcCC---CcccCCCCccCCCCCCCCCcCCCCCCCCccCCc---cCCCCCeeECCCCCcCCCC
Confidence 34579999999998 77410 12344555556555544320 0112357999999999864
No 117
>2bz6_L Blood coagulation factor VIIA; serine protease, enzyme complex, hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: g.3.11.1 PDB: 1w8b_L* 1w7x_L* 1cvw_L*
Probab=91.83 E-value=0.089 Score=29.10 Aligned_cols=34 Identities=24% Similarity=0.480 Sum_probs=24.4
Q ss_pred CCCCCEEeeCCC-CeeeeCCCCCccCC-CCCCcccCCCCCC
Q psy2457 35 CGVNSECNVRNH-IPVCSCPPGYTGDP-LTQCRRFDPHDLC 73 (189)
Q Consensus 35 C~~~~~C~~~~~-~~~C~c~~g~~~~~-~~~c~~~~~~~~c 73 (189)
|.+ .|+++.+ +|.|.|++||.... .+.|+ ++++|
T Consensus 9 C~~--~C~n~~ggs~~C~C~~Gy~L~~Dg~tC~---d~dec 44 (53)
T 2bz6_L 9 CEQ--YCSDHTGTKRSCRCHEGYSLLADGVSCT---PTVEY 44 (53)
T ss_dssp CSS--EEEEETTTEEEEECCTTEEECTTSSCEE---ECSSS
T ss_pred cCC--EeEcCCCCCEEeeCCCCCEECCCCCccc---CCccc
Confidence 655 8999988 79999999998542 22563 45554
No 118
>3nt1_A Prostaglandin-endoperoxide synthase 2; prostaglandin H2 synthase, cyclooxygenase-2, naproxen, oxido; HET: NAG BOG NPS HEM; 1.73A {Mus musculus} PDB: 3ln1_A* 3mqe_A* 3ln0_A* 3ntb_A* 3q7d_A* 4fm5_A* 1pxx_A* 3pgh_A* 1cx2_A* 4cox_A* 5cox_A* 6cox_A* 3qh0_A* 3qmo_A* 4e1g_A* 3olu_A* 3olt_A* 3hs5_A* 3hs6_A* 3hs7_A* ...
Probab=90.99 E-value=0.12 Score=43.18 Aligned_cols=34 Identities=26% Similarity=0.619 Sum_probs=29.0
Q ss_pred ccchhh-CCCCCEEee-CCCCeeeeCC-CCCccCCCCCCc
Q psy2457 29 RLSDSQ-CGVNSECNV-RNHIPVCSCP-PGYTGDPLTQCR 65 (189)
Q Consensus 29 ~~c~~~-C~~~~~C~~-~~~~~~C~c~-~g~~~~~~~~c~ 65 (189)
++|... |.++++|.. ..++|.|.|. +||.|. .|+
T Consensus 2 d~C~s~PC~ngG~C~~~~~~~y~C~C~~~G~~G~---~Ce 38 (587)
T 3nt1_A 2 NPCCSNPCQNRGECMSTGFDQYKCDCTRTGFYGE---NCT 38 (587)
T ss_dssp CTTTTCCCCTTCEEEEEETTEEEEECTTSSEETT---TTC
T ss_pred CCCCCCCCCCCCEeeCCCCCCeEEecCCCCccCC---CCC
Confidence 567766 999999995 4578999999 999999 886
No 119
>3nt1_A Prostaglandin-endoperoxide synthase 2; prostaglandin H2 synthase, cyclooxygenase-2, naproxen, oxido; HET: NAG BOG NPS HEM; 1.73A {Mus musculus} PDB: 3ln1_A* 3mqe_A* 3ln0_A* 3ntb_A* 3q7d_A* 4fm5_A* 1pxx_A* 3pgh_A* 1cx2_A* 4cox_A* 5cox_A* 6cox_A* 3qh0_A* 3qmo_A* 4e1g_A* 3olu_A* 3olt_A* 3hs5_A* 3hs6_A* 3hs7_A* ...
Probab=90.98 E-value=0.13 Score=42.93 Aligned_cols=37 Identities=32% Similarity=0.831 Sum_probs=29.9
Q ss_pred CCCCCCCCCCCCCeeecCCCCCCCCCCeeeCC-CCcccCCCC
Q psy2457 70 HDLCEPNPCGENAKCQPGYDKSGKDRPVCTCL-PGYVGDALT 110 (189)
Q Consensus 70 ~~~c~~~~c~~~~~C~~~~~~~~~~~~~c~c~-~g~~~~~~~ 110 (189)
+++|..+||.++++|.. ...+.|.|.|+ +||.|..|+
T Consensus 1 vd~C~s~PC~ngG~C~~----~~~~~y~C~C~~~G~~G~~Ce 38 (587)
T 3nt1_A 1 ANPCCSNPCQNRGECMS----TGFDQYKCDCTRTGFYGENCT 38 (587)
T ss_dssp CCTTTTCCCCTTCEEEE----EETTEEEEECTTSSEETTTTC
T ss_pred CCCCCCCCCCCCCEeeC----CCCCCeEEecCCCCccCCCCC
Confidence 36788999999999984 02357999999 999998855
No 120
>1ob1_C Major merozoite surface protein; immune system, immunoglobulin/complex, immunoglobulin, antib fragment, MSP1-19, EGF-like domain; 2.90A {Plasmodium falciparum} SCOP: g.3.11.4 g.3.11.4 PDB: 1cej_A 2flg_A
Probab=90.37 E-value=0.43 Score=30.00 Aligned_cols=69 Identities=26% Similarity=0.582 Sum_probs=45.2
Q ss_pred CCCCCEEeeC-CCCeeeeCCCCCccCCCCCCcccCCCCCCCCCC--CCCCCeeecCCCCCCCCCCeeeCCCCcc
Q psy2457 35 CGVNSECNVR-NHIPVCSCPPGYTGDPLTQCRRFDPHDLCEPNP--CGENAKCQPGYDKSGKDRPVCTCLPGYV 105 (189)
Q Consensus 35 C~~~~~C~~~-~~~~~C~c~~g~~~~~~~~c~~~~~~~~c~~~~--c~~~~~C~~~~~~~~~~~~~c~c~~g~~ 105 (189)
|..++.|... ++...|+|..||.+... .|.+ .....|..+. |...+.|.........+...|.|.+++.
T Consensus 12 C~~NA~C~r~~~g~e~C~C~~gy~gdg~-~Cv~-~~~~sC~~nNGGCd~nA~C~~~~~~~~~~ki~C~C~~g~~ 83 (99)
T 1ob1_C 12 CPQNSGCFRHLDEREECKCLLNYKQEGD-KCVE-NPNPTCNENNGGCDADAKCTEEDSGSNGKKITCECTKPDS 83 (99)
T ss_dssp CCTTEEEECCTTSCCEEEECTTEEEETT-EEEE-CSCCCSTTGGGGCCTTEEEECCSCSSSSCCCEEEECSTTC
T ss_pred CCCCCCeEEcCCCCEEEEecCCeecCCC-eEee-CCCCChhhcCCCcCCCceeEecCCcccCCceEeEeCCCCc
Confidence 6667788774 68889999999997754 6752 1124665432 7777888762110011457899998864
No 121
>2fd6_A Urokinase-type plasminogen activator; UPAR, ATF, ATN-615 antibody, FAB, ternary complex, immune SY hydrolase; HET: PGE NAG FUC NDG PG4; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 3bt2_A* 3bt1_A* 3u73_A* 1urk_A* 3laq_A* 1kdu_A
Probab=90.13 E-value=0.5 Score=30.92 Aligned_cols=29 Identities=21% Similarity=0.510 Sum_probs=22.0
Q ss_pred CCCCCCeeecCCCCCCC--CCC-eeeCCCCcccCCCC
Q psy2457 77 PCGENAKCQPGYDKSGK--DRP-VCTCLPGYVGDALT 110 (189)
Q Consensus 77 ~c~~~~~C~~~~~~~~~--~~~-~c~c~~g~~~~~~~ 110 (189)
||.++++|.. .. ..+ .|.|+++|.|..++
T Consensus 2 pC~nggtC~~-----~~~~~~~~~C~Cp~g~~G~~Ce 33 (122)
T 2fd6_A 2 DCLNGGTCVS-----NKYFSNIHWCNCPKKFGGQHCE 33 (122)
T ss_dssp CCCSSCEEEE-----CTTTTTCEEEECCTTEESTTSC
T ss_pred CCCCcCCcCC-----CcccCCCCCccCCCCCCCcccc
Confidence 6788889976 21 345 89999999998744
No 122
>1n1i_A Merozoite surface protein-1; MSP1, malaria, surface antigen, glycoprotein, EGF domain, cell adhesion; HET: HIS; 2.40A {Plasmodium knowlesi strain H} SCOP: g.3.11.4 g.3.11.4
Probab=89.62 E-value=0.65 Score=29.43 Aligned_cols=63 Identities=22% Similarity=0.455 Sum_probs=45.2
Q ss_pred CCCCCEEee-CCCCeeeeCCCCCccCCCCCCcccCCCCC-CCCCC--CCCCCeeecCCCCCCCCCCeeeCCCCcc
Q psy2457 35 CGVNSECNV-RNHIPVCSCPPGYTGDPLTQCRRFDPHDL-CEPNP--CGENAKCQPGYDKSGKDRPVCTCLPGYV 105 (189)
Q Consensus 35 C~~~~~C~~-~~~~~~C~c~~g~~~~~~~~c~~~~~~~~-c~~~~--c~~~~~C~~~~~~~~~~~~~c~c~~g~~ 105 (189)
|..++.|.. .++.-.|+|..||.+... .|. .. +. |..+. |...+.|.. ..+....|.|..++.
T Consensus 18 Cp~NA~C~r~~~G~e~CrCl~gY~~dg~-~Cv--~~-Np~C~~nNGGCd~nAeC~~----~~~~ki~C~C~~~~~ 84 (105)
T 1n1i_A 18 VPENAACYRYLDGTEEWRCLLGFKEVGG-KCV--PA-SITCEENNGGCAPEAECTM----DDKKEVECKCTKEGS 84 (105)
T ss_dssp CCTTEEEEECTTSCEEEEECTTEEECSS-SEE--EC-CCCTTSGGGGSCTTSEEEE----CTTSCEEEECCSTTC
T ss_pred CCCCCCeEECCCCCEeEEEECCeeccCC-EEE--EC-CcchhhcCCCcCCCcEeEE----CCCCEEEeECCCCCC
Confidence 666788988 578889999999998765 685 23 55 54333 777788876 123467899988863
No 123
>1iox_A Betacellulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1ip0_A
Probab=89.52 E-value=0.19 Score=27.43 Aligned_cols=27 Identities=33% Similarity=0.984 Sum_probs=21.8
Q ss_pred CCCCCEEee--CCCCeeeeCCCCCccCCCCCCc
Q psy2457 35 CGVNSECNV--RNHIPVCSCPPGYTGDPLTQCR 65 (189)
Q Consensus 35 C~~~~~C~~--~~~~~~C~c~~g~~~~~~~~c~ 65 (189)
|.+ |+|+. ..+.+.|.|+.||.|. .|+
T Consensus 16 C~n-G~C~~~~~~~~~~C~C~~gy~G~---RCe 44 (50)
T 1iox_A 16 CIK-GRCRFVVAEQTPSCVCDEGYIGA---RCE 44 (50)
T ss_dssp CTT-CCEEEETTTTEEEECCCTTEETT---TTC
T ss_pred ccC-CEEEeEcCCCCeEEECCCCcccC---CCC
Confidence 777 78963 3456889999999999 885
No 124
>2rnl_A Amphiregulin; AR, colorectum cell-derived growth factor, EGF-like domain, CRDGF, cytokine, glycoprotein, membrane, polymorphism, transmembrane; NMR {Homo sapiens}
Probab=89.03 E-value=0.61 Score=25.38 Aligned_cols=27 Identities=30% Similarity=0.795 Sum_probs=21.6
Q ss_pred CCCCCEEee--CCCCeeeeCCCCCccCCCCCCc
Q psy2457 35 CGVNSECNV--RNHIPVCSCPPGYTGDPLTQCR 65 (189)
Q Consensus 35 C~~~~~C~~--~~~~~~C~c~~g~~~~~~~~c~ 65 (189)
|.+ ++|+. ..+.+.|.|+.||.|. .|+
T Consensus 20 C~n-G~C~~i~~~~~~~C~C~~gy~G~---RCe 48 (50)
T 2rnl_A 20 CIH-GECKYIEHLEAVTCKCQQEYFGE---RCG 48 (50)
T ss_dssp CSS-SEEEEETTTTEEEEECCSSCCSS---SCC
T ss_pred CCC-CEEEEecCCCCeeEECCCCcccc---ccc
Confidence 876 69973 3456899999999999 885
No 125
>2wph_E Coagulation factor IXA light chain; serine protease, zymogen, hydrolase, glycoprotein, hydroxylation, phosphoprotein, sulfation, hemostasis; HET: DPN 1PE; 1.50A {Homo sapiens} PDB: 2wpi_E* 2wpj_E* 2wpk_E* 2wpl_E* 2wpm_E 3kcg_L* 3lc3_B* 1rfn_B* 3lc5_B*
Probab=88.50 E-value=0.42 Score=26.97 Aligned_cols=23 Identities=35% Similarity=0.723 Sum_probs=19.6
Q ss_pred CCCCCEEeeCC-CCeeeeCCCCCccC
Q psy2457 35 CGVNSECNVRN-HIPVCSCPPGYTGD 59 (189)
Q Consensus 35 C~~~~~C~~~~-~~~~C~c~~g~~~~ 59 (189)
|.+ .|++++ ++|.|.|++||...
T Consensus 9 C~~--~C~n~~~gs~~C~C~~Gy~L~ 32 (59)
T 2wph_E 9 CEQ--FCKNSADNKVVCSCTEGYRLA 32 (59)
T ss_dssp CSS--EEEECSTTCEEEECCTTEEEC
T ss_pred cCC--EeEeCCCCCEEeeCCCCcEEC
Confidence 665 899998 69999999999854
No 126
>3e50_C Protransforming growth factor alpha; IDE, TGF-alpha, cytoplasm, hydrolase, metal-binding, metalloprotease, polymorphism, protease, zinc; 2.30A {Homo sapiens} SCOP: g.3.11.1 PDB: 1yuf_A 1yug_A 2tgf_A 1mox_C 3tgf_A 4tgf_A
Probab=87.43 E-value=0.66 Score=25.25 Aligned_cols=27 Identities=33% Similarity=0.945 Sum_probs=21.9
Q ss_pred CCCCCEEeeC--CCCeeeeCCCCCccCCCCCCc
Q psy2457 35 CGVNSECNVR--NHIPVCSCPPGYTGDPLTQCR 65 (189)
Q Consensus 35 C~~~~~C~~~--~~~~~C~c~~g~~~~~~~~c~ 65 (189)
|.+ |.|... .+.+.|.|.+||.|. .|+
T Consensus 16 C~n-G~C~~~~~~~~~~C~C~~gy~G~---RCe 44 (50)
T 3e50_C 16 CFH-GTCRFLVQEDKPACVCHSGYVGA---RCE 44 (50)
T ss_pred ccC-CEEeeccCCCCeEEECCCCCccc---CCC
Confidence 776 499863 367899999999999 885
No 127
>1q4g_A Prostaglandin G/H synthase 1; cyclooxygenase, non-steroidal anti-inflammatory drug, peroxi prostaglandin synthase, EGF-like domain; HET: BOG NAG NDG BMA MAN BFL HEM; 2.00A {Ovis aries} SCOP: a.93.1.2 g.3.11.1 PDB: 1diy_A* 2ayl_A* 3kk6_A* 3n8v_A* 3n8w_A* 3n8x_A* 3n8y_A* 3n8z_A* 2oyu_P* 2oye_P* 1eqg_A* 1cqe_A* 1eqh_A* 1igz_A* 1igx_A* 1fe2_A* 1pge_A* 1pgf_A* 1pgg_A* 3n8w_B* ...
Probab=87.09 E-value=0.26 Score=40.98 Aligned_cols=37 Identities=35% Similarity=0.693 Sum_probs=30.0
Q ss_pred CCCCCCCCCCCCCeeecCCCCCCCCCCeeeCC-CCcccCCCC
Q psy2457 70 HDLCEPNPCGENAKCQPGYDKSGKDRPVCTCL-PGYVGDALT 110 (189)
Q Consensus 70 ~~~c~~~~c~~~~~C~~~~~~~~~~~~~c~c~-~g~~~~~~~ 110 (189)
+++|..+||.++++|.. ...+.|.|.|. .||.|..|+
T Consensus 2 ~d~C~~~PC~ngG~C~~----~~~~~y~C~C~~~G~~G~~Ce 39 (553)
T 1q4g_A 2 VNPCCYYPCQHQGICVR----FGLDRYQCDCTRTGYSGPNCT 39 (553)
T ss_dssp CCGGGGCCCCTTCEEEE----ETTTEEEEECTTSSEETTTTC
T ss_pred CCcCCCCCCCCCCCcCC----CCCCceEeeCCCCCcCCCCCC
Confidence 46788899999999975 13457999999 999998854
No 128
>3cfw_A L-selectin; EGF, cell adhesion, EGF-like domain, glycoprotein, membrane, sushi, transmembrane; HET: NAG MAN BMA; 2.20A {Homo sapiens}
Probab=86.98 E-value=0.33 Score=33.16 Aligned_cols=33 Identities=30% Similarity=0.611 Sum_probs=25.9
Q ss_pred CCCCCEEeeCCCCeeeeCCCCCccCCCCCCcccCCCCCC
Q psy2457 35 CGVNSECNVRNHIPVCSCPPGYTGDPLTQCRRFDPHDLC 73 (189)
Q Consensus 35 C~~~~~C~~~~~~~~C~c~~g~~~~~~~~c~~~~~~~~c 73 (189)
|..++.|.+..+++.|.|.+||.|. .|+ .+.+|
T Consensus 127 C~~~g~C~~~~~~~~c~C~~g~~g~---~C~---~~~~c 159 (164)
T 3cfw_A 127 CSGHGECVEIINNYTCNCDVGYYGP---QCQ---FVQVD 159 (164)
T ss_dssp SCSSEEEEEETTEEEEEECTTCBSS---SSC---BC---
T ss_pred CCCCCeecccCCCceeeeCCCcccc---ccc---ccccC
Confidence 7777899988889999999999999 895 34554
No 129
>1nzi_A Complement C1S component; calcium, innate immunity, modular structure, CUB, EGF, hydrolase; 1.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=86.87 E-value=0.6 Score=31.68 Aligned_cols=22 Identities=32% Similarity=0.579 Sum_probs=19.0
Q ss_pred CCCCCEeeeCCCCeeeeCCCCCcc
Q psy2457 142 CGINAQCTARNHVATCSCPAGYQG 165 (189)
Q Consensus 142 C~~~~~C~~~~g~~~C~C~~G~~g 165 (189)
|. ..|.+..++|.|.|++||+.
T Consensus 128 C~--~~C~n~~g~~~C~C~~Gy~l 149 (159)
T 1nzi_A 128 CS--HFCNNFIGGYFCSCPPEYFL 149 (159)
T ss_dssp SS--SEEEEETTEEEEECCTTCEE
T ss_pred CC--CcccCcCCCEEEecCCCcEE
Confidence 64 47999999999999999994
No 130
>3qcw_A Neurexin-1-alpha; synaptic adhesion molecule, cell adhesion; HET: NAG; 2.65A {Bos taurus} PDB: 3r05_A* 3poy_A*
Probab=85.51 E-value=0.55 Score=42.82 Aligned_cols=34 Identities=18% Similarity=0.588 Sum_probs=30.0
Q ss_pred CCccc-cCCCCCEeeeCCCCeeeeCC-CCCccCCcc
Q psy2457 136 KACTS-QCGINAQCTARNHVATCSCP-AGYQGDALS 169 (189)
Q Consensus 136 ~~c~~-~C~~~~~C~~~~g~~~C~C~-~G~~g~~~~ 169 (189)
+.|.. +|.++|+|.....+|.|.|+ +||.|..|.
T Consensus 1018 ~~C~~~pC~ngG~C~~~~~~~~C~C~~~g~~G~~C~ 1053 (1245)
T 3qcw_A 1018 TTCQEDSCSNQGVCLQQWDGFSCDCSMTSFSGPLCN 1053 (1245)
T ss_dssp CCCCTTSSSSSCEEEEETTEEEEECTTSSCBSTTSC
T ss_pred CceECCcCCCCCEeCCCCCCCEEECCCCCCCCCCcc
Confidence 56766 89999999999999999999 699999974
No 131
>3zyj_B Netrin-G1; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=84.59 E-value=0.8 Score=36.69 Aligned_cols=24 Identities=29% Similarity=0.648 Sum_probs=19.4
Q ss_pred CEEeeCCCCeeeeCCCCCccCCCCCCc
Q psy2457 39 SECNVRNHIPVCSCPPGYTGDPLTQCR 65 (189)
Q Consensus 39 ~~C~~~~~~~~C~c~~g~~~~~~~~c~ 65 (189)
..|....+.+.|.|..++.|. .|+
T Consensus 304 s~C~~~~g~~~C~C~~~ttG~---~CE 327 (426)
T 3zyj_B 304 TVCVYDNSKLTCECEHNTTGP---DCG 327 (426)
T ss_dssp SCEEEETTEEEECCCTTEESS---SSC
T ss_pred hhcCCCCCCceeeCCCCCcCC---Ccc
Confidence 568776677899999999988 775
No 132
>3qcw_A Neurexin-1-alpha; synaptic adhesion molecule, cell adhesion; HET: NAG; 2.65A {Bos taurus} PDB: 3r05_A* 3poy_A*
Probab=84.38 E-value=0.68 Score=42.24 Aligned_cols=34 Identities=32% Similarity=0.720 Sum_probs=30.1
Q ss_pred CCccc-cCCCCCEeeeCCCCeeeeCC-CCCccCCcc
Q psy2457 136 KACTS-QCGINAQCTARNHVATCSCP-AGYQGDALS 169 (189)
Q Consensus 136 ~~c~~-~C~~~~~C~~~~g~~~C~C~-~G~~g~~~~ 169 (189)
+.|.. +|.+++.|......|.|.|+ .||.|..|.
T Consensus 620 ~~C~~~pC~ngg~C~~~~~~~~C~C~~~g~~G~~C~ 655 (1245)
T 3qcw_A 620 KPCLSNPCKNNGMCRDGWNRYVCDCSGTGYLGRSCE 655 (1245)
T ss_dssp CGGGSCCCCTTCEEEECSSSEEEECTTTTEESTTSC
T ss_pred CCCCccCCCCCCEEeCCCCCeEEECCCCCcccccCc
Confidence 56766 89999999999999999999 799999874
No 133
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=82.42 E-value=0.47 Score=36.71 Aligned_cols=29 Identities=21% Similarity=0.471 Sum_probs=17.6
Q ss_pred ccchhh--CCCCCEEeeCCCCeeeeCCCCCccC
Q psy2457 29 RLSDSQ--CGVNSECNVRNHIPVCSCPPGYTGD 59 (189)
Q Consensus 29 ~~c~~~--C~~~~~C~~~~~~~~C~c~~g~~~~ 59 (189)
++|..+ |.+ .|++++++|.|.|.+||...
T Consensus 2 ~ec~~~~~C~~--~C~n~~g~~~C~C~~g~~l~ 32 (349)
T 3v64_C 2 NECAEEGYCSQ--GCTNSEGAFQCWCEAGYELR 32 (349)
T ss_dssp -------CCSS--EECCC---CCEECCTTEEEC
T ss_pred cccCCCCCCcC--eeecCCCCeEEECCCCccCC
Confidence 556533 776 99999999999999999854
No 134
>1nzi_A Complement C1S component; calcium, innate immunity, modular structure, CUB, EGF, hydrolase; 1.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=82.16 E-value=0.39 Score=32.65 Aligned_cols=33 Identities=30% Similarity=0.438 Sum_probs=25.5
Q ss_pred ccccccchhh----CCCCCEEeeCCCCeeeeCCCCCccC
Q psy2457 25 YLGIRLSDSQ----CGVNSECNVRNHIPVCSCPPGYTGD 59 (189)
Q Consensus 25 c~~~~~c~~~----C~~~~~C~~~~~~~~C~c~~g~~~~ 59 (189)
+.++++|... |. ..|.+..+++.|.|.+||.+.
T Consensus 114 ~~d~~eC~~~~~~~C~--~~C~n~~g~~~C~C~~Gy~l~ 150 (159)
T 1nzi_A 114 ATDINECTDFVDVPCS--HFCNNFIGGYFCSCPPEYFLH 150 (159)
T ss_dssp EEECCTTTC-CCCCSS--SEEEEETTEEEEECCTTCEEC
T ss_pred cccCcccCCCCCCCCC--CcccCcCCCEEEecCCCcEEC
Confidence 4567777653 65 489999999999999999854
No 135
>1g1t_A E-selectin; EGF, adhesion molecule, SLEX, immune system, membrane protein; HET: SIA GAL MAG FUC; 1.50A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1esl_A
Probab=82.07 E-value=0.32 Score=32.89 Aligned_cols=28 Identities=32% Similarity=0.865 Sum_probs=24.6
Q ss_pred CCCCCEEeeCCCCeeeeCCCCCccCCCCCCc
Q psy2457 35 CGVNSECNVRNHIPVCSCPPGYTGDPLTQCR 65 (189)
Q Consensus 35 C~~~~~C~~~~~~~~C~c~~g~~~~~~~~c~ 65 (189)
|.+++.|.+....|.|.|.+||.|. .|+
T Consensus 127 c~~~g~C~~~~~~~~c~C~~g~~g~---~Ce 154 (157)
T 1g1t_A 127 CSGHGECVETINNYTCKCDPGFSGL---KCE 154 (157)
T ss_dssp GGGSEEEEEETTEEEEEECTTEEST---TSC
T ss_pred CCCCCEeecCCCCeeEECCCCccCc---ccc
Confidence 6666889988899999999999999 885
No 136
>1szb_A Mannose binding lectin-associated serine protease-2 related protein, MAP19 (19KDA)...; calcium, complement, innate immunity, CUB, EGF; 2.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=80.78 E-value=0.37 Score=33.28 Aligned_cols=33 Identities=24% Similarity=0.386 Sum_probs=25.5
Q ss_pred ccccccchhh------CCCCCEEeeCCCCeeeeCCCCCccC
Q psy2457 25 YLGIRLSDSQ------CGVNSECNVRNHIPVCSCPPGYTGD 59 (189)
Q Consensus 25 c~~~~~c~~~------C~~~~~C~~~~~~~~C~c~~g~~~~ 59 (189)
+.++++|... |.+ .|.+..++|.|.|.+||...
T Consensus 121 ~~di~eC~~~~~~~~~C~~--~C~n~~g~~~C~C~~Gy~l~ 159 (170)
T 1szb_A 121 AEDIDECQVAPGEAPTCDH--HCHNHLGGFYCSCRAGYVLH 159 (170)
T ss_dssp EEECCTTCCCTTSCCSSSS--EEEEETTEEEEECCTTEEEC
T ss_pred ccccCcccCCCCCCCccCC--ccccCCCCEEEeCCCCcEEC
Confidence 4566777643 544 79999999999999999854
No 137
>1oig_A Dumpy, CG33196-PB; structural protein; NMR {Drosophila melanogaster} SCOP: g.3.18.1
Probab=80.72 E-value=1.3 Score=20.43 Aligned_cols=22 Identities=27% Similarity=0.792 Sum_probs=14.7
Q ss_pred CCCCCCCCCCCccCCCeecCCc
Q psy2457 117 CQSDAECNYDQVCNNYNCEKAC 138 (189)
Q Consensus 117 c~~~~~c~~~~~c~~~~c~~~c 138 (189)
|....+|.....|++..|+|.|
T Consensus 4 C~~~sdCp~~~aC~n~kC~dPC 25 (26)
T 1oig_A 4 CVLNSDCPSNQACVNQKCRDPX 25 (26)
T ss_dssp CCSSTTSSTTCEECSSSEECC-
T ss_pred ccccCcCCcCHhhhcCcccCCC
Confidence 4455577777777888787765
No 138
>1xdt_R Hbegf, heparin-binding epidermal growth factor; complex (toxin-growth factor), diphtheria toxin, receptor, H binding epidermal growth factor; 2.65A {Homo sapiens} SCOP: g.3.11.1
Probab=80.48 E-value=0.61 Score=28.04 Aligned_cols=34 Identities=32% Similarity=0.769 Sum_probs=23.7
Q ss_pred cccch---hh-CCCCCEEeeC--CCCeeeeCCCCCccCCCCCCc
Q psy2457 28 IRLSD---SQ-CGVNSECNVR--NHIPVCSCPPGYTGDPLTQCR 65 (189)
Q Consensus 28 ~~~c~---~~-C~~~~~C~~~--~~~~~C~c~~g~~~~~~~~c~ 65 (189)
.++|. .. |.+ +.|+.. .+.+.|.|.+||.|. .|+
T Consensus 37 ~~pC~~~~~~yCln-G~C~~i~~~~~~~C~C~~GYtG~---RCE 76 (79)
T 1xdt_R 37 RDPCLRKYKDFCIH-GECKYVKELRAPSCICHPGYHGE---RCH 76 (79)
T ss_dssp --CTTTTTTTCCSS-EEECCBGGGTBCCEEECTTEEST---TCC
T ss_pred CCCCCccccCcCCC-CEeeeecCCCCeEEEcCCCcccc---ccc
Confidence 45665 23 876 489543 356889999999999 885
No 139
>2ygo_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: MLY PCF NAG; 1.85A {Homo sapiens} PDB: 2ygp_A*
Probab=79.90 E-value=1.6 Score=30.82 Aligned_cols=30 Identities=30% Similarity=0.840 Sum_probs=24.2
Q ss_pred CCCCCCCCCCCCeeecCCCCCCCCCCeeeCCCCcccCCC
Q psy2457 71 DLCEPNPCGENAKCQPGYDKSGKDRPVCTCLPGYVGDAL 109 (189)
Q Consensus 71 ~~c~~~~c~~~~~C~~~~~~~~~~~~~c~c~~g~~~~~~ 109 (189)
..| ..+|.++|.|.. ...|.|+.||.|..|
T Consensus 149 ~~C-~~~C~ngG~Cv~--------P~~C~C~~Gw~G~~C 178 (188)
T 2ygo_A 149 AEC-PGGCRNGGFCNE--------RRICECPDGFHGPHC 178 (188)
T ss_dssp CCC-TTCCCTTCEECT--------TSCEECCTTCBTTTT
T ss_pred Ccc-CCCCCCCCEeCC--------CCcccCcCCCCCCCC
Confidence 455 368999999984 588999999999863
No 140
>3asi_A Neurexin-1-alpha; beta-sandwich, cell adhesion, synapse maturation, neuroligin glycosylation, membrane; HET: NAG; 2.30A {Bos taurus}
Probab=78.16 E-value=1.7 Score=34.36 Aligned_cols=35 Identities=17% Similarity=0.461 Sum_probs=29.8
Q ss_pred cccchhh-CCCCCEEeeCCCCeeeeCCC-CCccCCCCCCc
Q psy2457 28 IRLSDSQ-CGVNSECNVRNHIPVCSCPP-GYTGDPLTQCR 65 (189)
Q Consensus 28 ~~~c~~~-C~~~~~C~~~~~~~~C~c~~-g~~~~~~~~c~ 65 (189)
.+.|... |.+++.|+.....|.|.|+. +|.|+ .|+
T Consensus 185 ~~~C~~~pC~n~g~C~~~~~~~~C~C~~~~~~G~---~C~ 221 (410)
T 3asi_A 185 STTCQEDSCSNQGVCLQQWDGFSCDCSMTSFSGP---LCN 221 (410)
T ss_dssp SSCCCTTSSSTTCEEEECSSSEEEECTTTSEEST---TSC
T ss_pred CCCcccccCCCCCEecCCCCCceEeccCCcccCC---CCC
Confidence 3567666 99999999999999999996 99988 885
No 141
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=70.53 E-value=3.3 Score=34.87 Aligned_cols=41 Identities=29% Similarity=0.559 Sum_probs=28.1
Q ss_pred cCCccc---cCCCCCEeeeCC-CCeeeeCCCCCccC-CcccCeecCCc
Q psy2457 135 EKACTS---QCGINAQCTARN-HVATCSCPAGYQGD-ALSRCYPAETT 177 (189)
Q Consensus 135 ~~~c~~---~C~~~~~C~~~~-g~~~C~C~~G~~g~-~~~~c~~~~~~ 177 (189)
+++|.. .|. ..|.+.+ ++|.|.|++||... .-.+|.+...+
T Consensus 265 ~n~C~~~ng~C~--~~C~~~~~~~~~C~C~~g~~l~~d~~~C~~~~~~ 310 (628)
T 4a0p_A 265 WNECASSNGHCS--HLCLAVPVGGFVCGCPAHYSLNADNRTCSAPTTF 310 (628)
T ss_dssp CCTTTTTGGGCS--SEEEEETTTEEEEECSTTCEECTTSSCEECCSSE
T ss_pred ceEeccCCCCcc--hhhhcCCCCCeeEEcCCCcEecccCCcCccccce
Confidence 355543 465 3798888 89999999999843 33457765544
No 142
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=66.87 E-value=6.2 Score=29.94 Aligned_cols=34 Identities=21% Similarity=0.561 Sum_probs=22.1
Q ss_pred cCCCCCEeeeCCC--CeeeeCCCCCcc-CCcccCeecCC
Q psy2457 141 QCGINAQCTARNH--VATCSCPAGYQG-DALSRCYPAET 176 (189)
Q Consensus 141 ~C~~~~~C~~~~g--~~~C~C~~G~~g-~~~~~c~~~~~ 176 (189)
.|. ..|...++ +|+|.|+.||+. ....+|.+-..
T Consensus 276 ~Cs--~~C~~~~~~~~~~C~C~~g~~l~~d~~~c~~~~~ 312 (318)
T 3sov_A 276 GCS--HLCLMSPVKPFYQCACPTGVKLLENGKTCKDGNS 312 (318)
T ss_dssp GCS--SEEEECSSTTSEEEECSTTCCBCTTSSCBCC---
T ss_pred Ccc--eEEecCCCCCCeEEECCCCCEECCCCCCCCCCCc
Confidence 364 36887765 799999999983 33355776543
No 143
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=65.69 E-value=6.9 Score=29.46 Aligned_cols=27 Identities=26% Similarity=0.589 Sum_probs=18.9
Q ss_pred CEeeeCC------CCeeeeCCCCCcc-CCcccCe
Q psy2457 146 AQCTARN------HVATCSCPAGYQG-DALSRCY 172 (189)
Q Consensus 146 ~~C~~~~------g~~~C~C~~G~~g-~~~~~c~ 172 (189)
..|.+.+ ++|.|.|+.||+. ....+|.
T Consensus 282 ~~C~~~p~~~~~~~~~~C~C~~g~~l~~d~~~C~ 315 (316)
T 1ijq_A 282 YLCLPAPQINPHSPKFTCACPDGMLLARDMRSCL 315 (316)
T ss_dssp SEEEECCCCSTTCCSEEEECCTTCEECTTSSCEE
T ss_pred cccCCCccccCCCCCeEeeCCCCCEECCCCCccC
Confidence 3687664 5899999999983 3334464
No 144
>4aqt_A Laminin subunit gamma-1; cell adhesion; HET: NAG BMA; 3.20A {Mus musculus}
Probab=64.97 E-value=5.3 Score=31.40 Aligned_cols=20 Identities=25% Similarity=0.557 Sum_probs=15.9
Q ss_pred CCCeeeCCCCcccCCCCcCc
Q psy2457 94 DRPVCTCLPGYVGDALTYCR 113 (189)
Q Consensus 94 ~~~~c~c~~g~~~~~~~~c~ 113 (189)
+.+.|.|.+++.|..++.|.
T Consensus 270 ~~~~C~C~~nt~G~~Ce~C~ 289 (375)
T 4aqt_A 270 DKLMCNCKHNTYGVDCEKCL 289 (375)
T ss_dssp SCEEECCCTTEESTTSCEEC
T ss_pred CCeeeeCcCCCcCCCcccCC
Confidence 45678999999999877654
No 145
>3fby_A COMP, cartilage oligomeric matrix protein; signature domain, cell adhesion, disease mutation, dwarfism, EGF-like domain, glycoprotein, secreted; HET: NAG MAN; 3.15A {Homo sapiens}
Probab=63.78 E-value=4.5 Score=33.35 Aligned_cols=29 Identities=24% Similarity=0.780 Sum_probs=23.7
Q ss_pred cCCCCCEeeeC-CCCeeeeCCCCCccCCcc
Q psy2457 141 QCGINAQCTAR-NHVATCSCPAGYQGDALS 169 (189)
Q Consensus 141 ~C~~~~~C~~~-~g~~~C~C~~G~~g~~~~ 169 (189)
+|..++.|+.. .+.|.|.|+.||.|.+..
T Consensus 28 ~c~~~a~C~~~~~~~~~c~C~~G~ag~G~~ 57 (551)
T 3fby_A 28 ECHEHADCVLERDGSRSCVCAVGWAGNGIL 57 (551)
T ss_dssp CCCTTEEEEECTTSCEEEEECTTEESSSSS
T ss_pred CCCCCCeeEeCCCCCEecCCCCCCCCCCcc
Confidence 58888899765 467899999999988764
No 146
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=63.36 E-value=4.9 Score=33.72 Aligned_cols=35 Identities=26% Similarity=0.798 Sum_probs=25.1
Q ss_pred CCccc---cCCCCCEeeeCCCCeeeeCCCCCcc-CCcccCe
Q psy2457 136 KACTS---QCGINAQCTARNHVATCSCPAGYQG-DALSRCY 172 (189)
Q Consensus 136 ~~c~~---~C~~~~~C~~~~g~~~C~C~~G~~g-~~~~~c~ 172 (189)
++|.. .|. ..|.+.+++|.|.|+.||.. +...+|.
T Consensus 579 ~~C~~~ng~C~--~~C~~~~~~~~C~C~~g~~l~~d~~~C~ 617 (619)
T 3s94_A 579 NPCAEENGGCS--HLCLYRPQGLRCACPIGFELISDMKTCI 617 (619)
T ss_dssp CGGGSGGGGCS--SEEEEETTEEEEECCTTCEECSSTTCEE
T ss_pred ccCCCCCCChh--HhhccCCCCeEEECCCCCEECCCCCcCC
Confidence 55653 465 48999999999999999983 3334464
No 147
>2i9a_A Urokinase-type plasminogen activator; growth factor-like domain, kringle domain, hydrolase; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 2i9b_A*
Probab=61.52 E-value=6.5 Score=26.42 Aligned_cols=28 Identities=25% Similarity=0.729 Sum_probs=23.1
Q ss_pred CCCCCEEeeCC--CCe-eeeCCCCCccCCCCCCc
Q psy2457 35 CGVNSECNVRN--HIP-VCSCPPGYTGDPLTQCR 65 (189)
Q Consensus 35 C~~~~~C~~~~--~~~-~C~c~~g~~~~~~~~c~ 65 (189)
|.++++|+... ..+ .|.|+.||.+. .|+
T Consensus 15 C~NGGtC~~~~~~s~~~~C~Cp~g~~G~---~Ce 45 (145)
T 2i9a_A 15 CLNGGTCVSNKYFSNIHWCNCPKKFGGQ---HCE 45 (145)
T ss_dssp CCTTCEEEECSSSTTCEEEECCTTEEST---TSC
T ss_pred CCCCCCcCCCccccCCccccCCCCCCCC---cee
Confidence 88899998752 445 79999999999 885
No 148
>3f1s_B Vitamin K-dependent protein Z; PZ, ZPI, complex, serpin, protease inhibitor, protease, GLYC secreted, serine protease inhibitor, blood coagulation; HET: FLC NAG; 2.30A {Homo sapiens}
Probab=54.35 E-value=3.9 Score=30.48 Aligned_cols=23 Identities=30% Similarity=0.605 Sum_probs=19.4
Q ss_pred CCCCCEEeeCCCCeeeeCCCCCccC
Q psy2457 35 CGVNSECNVRNHIPVCSCPPGYTGD 59 (189)
Q Consensus 35 C~~~~~C~~~~~~~~C~c~~g~~~~ 59 (189)
|.+ .|.++.++|+|.|..||...
T Consensus 13 C~~--~C~~~~~~~~C~C~~G~~l~ 35 (283)
T 3f1s_B 13 CQH--FCLPGQESYTCSCAQGYRLG 35 (283)
T ss_dssp CSS--BCCCCTTSCCCBCCTTEEEC
T ss_pred CCC--EeeCCCCCeEecCCCCcccC
Confidence 665 78889999999999999743
No 149
>2y38_A Laminin subunit alpha-5; structural protein, cell adhesion, basement membrane; HET: NAG; 2.90A {Mus musculus}
Probab=52.29 E-value=29 Score=27.56 Aligned_cols=20 Identities=30% Similarity=0.647 Sum_probs=14.7
Q ss_pred Ceeee-CCCCCccCCcccCee
Q psy2457 154 VATCS-CPAGYQGDALSRCYP 173 (189)
Q Consensus 154 ~~~C~-C~~G~~g~~~~~c~~ 173 (189)
+-.|. |.+++.|.+|..|.+
T Consensus 356 ~G~C~~C~~nt~G~~CErC~~ 376 (403)
T 2y38_A 356 GGVCLDCQHHTTGINCERCLP 376 (403)
T ss_dssp CEEESSCCSSEESTTSCEECT
T ss_pred CCCCCCCcCcCcCCCCCcCCC
Confidence 44785 888888888876653
No 150
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=51.13 E-value=9 Score=29.34 Aligned_cols=31 Identities=26% Similarity=0.671 Sum_probs=22.3
Q ss_pred CCCCCEeeeCCCCeeeeCCCCCccCCcccCeec
Q psy2457 142 CGINAQCTARNHVATCSCPAGYQGDALSRCYPA 174 (189)
Q Consensus 142 C~~~~~C~~~~g~~~C~C~~G~~g~~~~~c~~~ 174 (189)
|. ..|...+++|+|.|+.||+...-.+|.+.
T Consensus 314 C~--~lCl~~~~~~~C~C~~g~~~~d~~~C~~~ 344 (349)
T 3v64_C 314 CT--HLCLPSGQNYTCACPTGFRKINSHACALE 344 (349)
T ss_dssp CS--SEEECCTTSCEEECCTTEEEETTTEEEEG
T ss_pred cc--cEeecCCCCCeeECCCCCcCCCCCcccch
Confidence 64 37888888999999999983233457543
No 151
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=49.88 E-value=8.6 Score=32.32 Aligned_cols=31 Identities=29% Similarity=0.517 Sum_probs=25.5
Q ss_pred ccccchhh---CCCCCEEeeCC-CCeeeeCCCCCccC
Q psy2457 27 GIRLSDSQ---CGVNSECNVRN-HIPVCSCPPGYTGD 59 (189)
Q Consensus 27 ~~~~c~~~---C~~~~~C~~~~-~~~~C~c~~g~~~~ 59 (189)
+.++|... |.+ .|++.+ ++|.|.|+.||...
T Consensus 264 ~~n~C~~~ng~C~~--~C~~~~~~~~~C~C~~g~~l~ 298 (628)
T 4a0p_A 264 GWNECASSNGHCSH--LCLAVPVGGFVCGCPAHYSLN 298 (628)
T ss_dssp CCCTTTTTGGGCSS--EEEEETTTEEEEECSTTCEEC
T ss_pred cceEeccCCCCcch--hhhcCCCCCeeEEcCCCcEec
Confidence 57788753 876 999998 89999999999753
No 152
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=47.05 E-value=16 Score=27.67 Aligned_cols=31 Identities=19% Similarity=0.396 Sum_probs=23.7
Q ss_pred ccccchhh---CCCCCEEeeCCC--CeeeeCCCCCccC
Q psy2457 27 GIRLSDSQ---CGVNSECNVRNH--IPVCSCPPGYTGD 59 (189)
Q Consensus 27 ~~~~c~~~---C~~~~~C~~~~~--~~~C~c~~g~~~~ 59 (189)
..++|... |.+ .|+..++ .+.|.|+.||...
T Consensus 266 ~~n~C~~~ng~Cs~--~C~~~~~~~~~~C~C~~g~~l~ 301 (318)
T 3sov_A 266 ATNPCGIDNGGCSH--LCLMSPVKPFYQCACPTGVKLL 301 (318)
T ss_dssp CCCTTTTTGGGCSS--EEEECSSTTSEEEECSTTCCBC
T ss_pred cccccccCCCCcce--EEecCCCCCCeEEECCCCCEEC
Confidence 35677643 876 8998875 6899999999754
No 153
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=43.46 E-value=13 Score=31.24 Aligned_cols=31 Identities=26% Similarity=0.514 Sum_probs=25.6
Q ss_pred ccccchhh---CCCCCEEeeCCCCeeeeCCCCCccC
Q psy2457 27 GIRLSDSQ---CGVNSECNVRNHIPVCSCPPGYTGD 59 (189)
Q Consensus 27 ~~~~c~~~---C~~~~~C~~~~~~~~C~c~~g~~~~ 59 (189)
..++|... |.+ .|++.++++.|.|+.||...
T Consensus 577 ~~~~C~~~ng~C~~--~C~~~~~~~~C~C~~g~~l~ 610 (619)
T 3s94_A 577 GSNPCAEENGGCSH--LCLYRPQGLRCACPIGFELI 610 (619)
T ss_dssp CCCGGGSGGGGCSS--EEEEETTEEEEECCTTCEEC
T ss_pred ccccCCCCCCChhH--hhccCCCCeEEECCCCCEEC
Confidence 56778654 876 99999999999999999754
No 154
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=43.32 E-value=18 Score=27.02 Aligned_cols=31 Identities=23% Similarity=0.507 Sum_probs=23.0
Q ss_pred ccccchh-----h-CCCCCEEeeCC------CCeeeeCCCCCccC
Q psy2457 27 GIRLSDS-----Q-CGVNSECNVRN------HIPVCSCPPGYTGD 59 (189)
Q Consensus 27 ~~~~c~~-----~-C~~~~~C~~~~------~~~~C~c~~g~~~~ 59 (189)
+.++|.. . |.+ .|++.+ +++.|.|+.||...
T Consensus 266 ~~n~C~~~~~~ng~Cs~--~C~~~p~~~~~~~~~~C~C~~g~~l~ 308 (316)
T 1ijq_A 266 GVNWCERTTLSNGGCQY--LCLPAPQINPHSPKFTCACPDGMLLA 308 (316)
T ss_dssp CCCTTSSSSSGGGGCSS--EEEECCCCSTTCCSEEEECCTTCEEC
T ss_pred ccccccccccCCCCcCc--ccCCCccccCCCCCeEeeCCCCCEEC
Confidence 4566753 2 875 999875 57999999999754
No 155
>2e26_A Reelin, reeler protein; signaling protein; HET: NAG BMA; 2.00A {Mus musculus} PDB: 3a7q_A*
Probab=41.87 E-value=8.4 Score=32.99 Aligned_cols=29 Identities=21% Similarity=0.637 Sum_probs=23.4
Q ss_pred CccccCCCCCEeeeCCCCeeeeCCCCCccCCcc
Q psy2457 137 ACTSQCGINAQCTARNHVATCSCPAGYQGDALS 169 (189)
Q Consensus 137 ~c~~~C~~~~~C~~~~g~~~C~C~~G~~g~~~~ 169 (189)
.|...|..+|.|++. .|.|.+||+|+.|.
T Consensus 536 ~Cp~~C~ghG~C~~G----~C~Cd~G~~G~~C~ 564 (725)
T 2e26_A 536 GCLDMCSGHGRCVQG----SCVCDEQWGGLYCD 564 (725)
T ss_dssp CSSGGGGGSEEEETT----EEEECTTEESTTSC
T ss_pred CCCcccCCCcEECCC----CEeeCCCccCCCcC
Confidence 343468889999875 79999999999974
No 156
>3f1s_B Vitamin K-dependent protein Z; PZ, ZPI, complex, serpin, protease inhibitor, protease, GLYC secreted, serine protease inhibitor, blood coagulation; HET: FLC NAG; 2.30A {Homo sapiens}
Probab=38.31 E-value=25 Score=25.95 Aligned_cols=20 Identities=35% Similarity=0.881 Sum_probs=15.4
Q ss_pred eeecCCCCCCCCCCeeeCCCCcccC
Q psy2457 83 KCQPGYDKSGKDRPVCTCLPGYVGD 107 (189)
Q Consensus 83 ~C~~~~~~~~~~~~~c~c~~g~~~~ 107 (189)
.|.+ ..++|.|.|..||...
T Consensus 16 ~C~~-----~~~~~~C~C~~G~~l~ 35 (283)
T 3f1s_B 16 FCLP-----GQESYTCSCAQGYRLG 35 (283)
T ss_dssp BCCC-----CTTSCCCBCCTTEEEC
T ss_pred EeeC-----CCCCeEecCCCCcccC
Confidence 5666 5678999999999643
No 157
>2h9e_C Anti-coagulant protein C2; factor XA, NAPC2, hydrolase-hydrolase inhibitor C blood clotting; HET: DTY; 2.20A {Ancylostoma caninum} SCOP: g.22.1.1 PDB: 1cou_A
Probab=37.29 E-value=6.7 Score=23.64 Aligned_cols=31 Identities=23% Similarity=0.553 Sum_probs=20.6
Q ss_pred eeeCCCCCccCCcccCeecCCcccccCeeee
Q psy2457 156 TCSCPAGYQGDALSRCYPAETTSYRRGRVYY 186 (189)
Q Consensus 156 ~C~C~~G~~g~~~~~c~~~~~~~~~~~~~~~ 186 (189)
-|.|++||..+..-.|.+...++-..++.+|
T Consensus 49 GC~C~~G~vr~~~g~CV~~~~Cpc~~~~~~y 79 (84)
T 2h9e_C 49 DCVCEEGFYRNKDDKCVSAEDCELDNMDFIY 79 (84)
T ss_dssp -CEECSSCEECTTCCEECHHHHGGGGEEEEC
T ss_pred CCCCCCCeEEcCCCCEECHHHCCCCcCCeEC
Confidence 4899999987643348887777744444444
No 158
>3ssb_I IMPI alpha, inducible metalloproteinase inhibitor protein; thermolysin fold - family I8 fold, metalloprotease thermoLys inhibitor; 1.80A {Galleria mellonella}
Probab=33.50 E-value=15 Score=17.74 Aligned_cols=23 Identities=30% Similarity=0.829 Sum_probs=15.5
Q ss_pred eeeCCCCCccCCcccCeecCCcc
Q psy2457 156 TCSCPAGYQGDALSRCYPAETTS 178 (189)
Q Consensus 156 ~C~C~~G~~g~~~~~c~~~~~~~ 178 (189)
-|.|++||..+..-.|.....++
T Consensus 6 GC~C~~G~vrn~~G~CV~~~~Cp 28 (32)
T 3ssb_I 6 KCYCEDGYARDVNGKCIPIKDCP 28 (32)
T ss_dssp EEEECTTEEECTTSCEEEGGGCC
T ss_pred CCCcCCCcEECCCCCEECHHHCc
Confidence 48899999865543466666554
No 159
>2ddu_A Reelin; beta-jelly-roll, signaling protein; 2.05A {Mus musculus}
Probab=33.22 E-value=14 Score=29.17 Aligned_cols=28 Identities=29% Similarity=0.801 Sum_probs=22.0
Q ss_pred CCccccCCCCCEeeeCCCCeeeeCCCCCccCC
Q psy2457 136 KACTSQCGINAQCTARNHVATCSCPAGYQGDA 167 (189)
Q Consensus 136 ~~c~~~C~~~~~C~~~~g~~~C~C~~G~~g~~ 167 (189)
..|...|..+|.|.+. .|.|-+||.|..
T Consensus 192 ~~Cp~~CsGhG~C~~g----~C~Cd~G~~g~d 219 (387)
T 2ddu_A 192 EPCPSYCSGHGDCISG----VCFCDLGYTAAQ 219 (387)
T ss_dssp SCCGGGGGGSEEEETT----EEEECTTEEEET
T ss_pred ccCccccCCCceecCC----eEEecCCcccCC
Confidence 3465579889999663 899999999864
No 160
>1b9w_A Protein (merozoite surface protein 1); MSP-1, candidate malaria vaccine, surface antigen; 1.80A {Plasmodium cynomolgi} SCOP: g.3.11.4 g.3.11.4 PDB: 2npr_A
Probab=31.34 E-value=93 Score=19.11 Aligned_cols=71 Identities=23% Similarity=0.426 Sum_probs=40.8
Q ss_pred CCCCCCCCCCeeecCCCCCCCCCCeeeCCCCcccCCCCcCccCCCCCCCCCCCCCccCCCeecCCccccCCCCCEeeeCC
Q psy2457 73 CEPNPCGENAKCQPGYDKSGKDRPVCTCLPGYVGDALTYCRRGECQSDAECNYDQVCNNYNCEKACTSQCGINAQCTARN 152 (189)
Q Consensus 73 c~~~~c~~~~~C~~~~~~~~~~~~~c~c~~g~~~~~~~~c~~~~c~~~~~c~~~~~c~~~~c~~~c~~~C~~~~~C~~~~ 152 (189)
|....|...+.|... ..+...|+|..+|.-..- .|.++ +...|...- ..|...|.|....
T Consensus 7 C~~tkcp~NA~Cyr~----~dg~EecRCllnykk~~~-kCV~~---~~~~C~~NN------------GGCd~nA~C~~~~ 66 (95)
T 1b9w_A 7 CIDTNVPENAACYRY----LDGTEEWRCLLYFKEDAG-KCVPA---PNMTCKDKN------------GGCAPEAECKMND 66 (95)
T ss_dssp CSSCCCCTTEEEEEC----TTSCEEEEECTTEEEETT-EEEEC---TTCCTTTGG------------GGSCTTSEEEECT
T ss_pred cccCCCCCCcCeEEE----cCCCEEEEEECCeEecCC-EEEcC---CCCCccccC------------CCcCCCcceeecC
Confidence 334456667788751 235678999999964321 12221 111222100 0488889997666
Q ss_pred -CCeeeeCCCCC
Q psy2457 153 -HVATCSCPAGY 163 (189)
Q Consensus 153 -g~~~C~C~~G~ 163 (189)
..-.|.|...+
T Consensus 67 ~~kIvC~C~~~~ 78 (95)
T 1b9w_A 67 KNEIVCKCTKEG 78 (95)
T ss_dssp TSCEEEECCSTT
T ss_pred CCcEEEECCCCC
Confidence 67789987664
No 161
>3fby_A COMP, cartilage oligomeric matrix protein; signature domain, cell adhesion, disease mutation, dwarfism, EGF-like domain, glycoprotein, secreted; HET: NAG MAN; 3.15A {Homo sapiens}
Probab=30.66 E-value=36 Score=28.11 Aligned_cols=29 Identities=24% Similarity=0.823 Sum_probs=23.2
Q ss_pred CCCCCEEeeCC-CCeeeeCCCCCccCCCCCC
Q psy2457 35 CGVNSECNVRN-HIPVCSCPPGYTGDPLTQC 64 (189)
Q Consensus 35 C~~~~~C~~~~-~~~~C~c~~g~~~~~~~~c 64 (189)
|..+..|+... +.|.|.|+.||.+.+. .|
T Consensus 29 c~~~a~C~~~~~~~~~c~C~~G~ag~G~-~c 58 (551)
T 3fby_A 29 CHEHADCVLERDGSRSCVCAVGWAGNGI-LC 58 (551)
T ss_dssp CCTTEEEEECTTSCEEEEECTTEESSSS-SC
T ss_pred CCCCCeeEeCCCCCEecCCCCCCCCCCc-cc
Confidence 77788998874 6789999999987654 45
No 162
>1jlz_A Tityustoxin alpha-KTX; scorpion venom, K+-channel blocker, structure; NMR {Synthetic} SCOP: g.3.7.2
Probab=27.63 E-value=22 Score=16.31 Aligned_cols=17 Identities=24% Similarity=0.766 Sum_probs=10.7
Q ss_pred cCCCCCEeeeCCCCeeeeCCC
Q psy2457 141 QCGINAQCTARNHVATCSCPA 161 (189)
Q Consensus 141 ~C~~~~~C~~~~g~~~C~C~~ 161 (189)
+|...+.|+|. .|.|.+
T Consensus 8 ~C~~~gKCmNg----kC~Cy~ 24 (26)
T 1jlz_A 8 KCKGSGKCING----RCKCYX 24 (26)
T ss_dssp HTTSSEEEETT----EEEEC-
T ss_pred hhCCCCEEeCC----Cceeec
Confidence 56566778775 677753
No 163
>3t5o_A Complement component C6; macpf, MAC, membrane attack complex, innate IMMU system, blood, membrane, cytolysin, immune SYST; HET: NAG FUL FUC BGC MAN; 2.87A {Homo sapiens} PDB: 4a5w_B* 4e0s_B*
Probab=27.46 E-value=35 Score=30.09 Aligned_cols=29 Identities=24% Similarity=0.480 Sum_probs=25.1
Q ss_pred cCCCCCEeeeCCCCeeeeCCCCCccCCcc
Q psy2457 141 QCGINAQCTARNHVATCSCPAGYQGDALS 169 (189)
Q Consensus 141 ~C~~~~~C~~~~g~~~C~C~~G~~g~~~~ 169 (189)
+|.+++++....+...|.|++||.|+.+.
T Consensus 504 PC~ngg~~~l~g~~C~C~C~~g~~G~~Ce 532 (913)
T 3t5o_A 504 PCPNNGRPTLSGTECLCVCQSGTYGENCE 532 (913)
T ss_dssp CBTTTBEEEEETTEEEEECCTTBCSTTSC
T ss_pred CCCCCCEeecCCCceEEEccCCccccCcc
Confidence 79999999887788889999999998874
No 164
>4aqt_A Laminin subunit gamma-1; cell adhesion; HET: NAG BMA; 3.20A {Mus musculus}
Probab=25.36 E-value=32 Score=26.95 Aligned_cols=33 Identities=21% Similarity=0.474 Sum_probs=22.9
Q ss_pred cCCCCCEe-e-eCCCCeeeeCCCCCccCCcccCee
Q psy2457 141 QCGINAQC-T-ARNHVATCSCPAGYQGDALSRCYP 173 (189)
Q Consensus 141 ~C~~~~~C-~-~~~g~~~C~C~~G~~g~~~~~c~~ 173 (189)
.|..++.+ . ...+.+.|.|.+||.|..|..|.+
T Consensus 256 ~Cngh~s~c~~~~~~~~~C~C~~nt~G~~Ce~C~~ 290 (375)
T 4aqt_A 256 KCNGHASECVKNEFDKLMCNCKHNTYGVDCEKCLP 290 (375)
T ss_dssp CCTTSCSCEEECTTSCEEECCCTTEESTTSCEECT
T ss_pred cCCCCCcccCCCCCCCeeeeCcCCCcCCCcccCCC
Confidence 35555433 2 345677899999999999876654
No 165
>2p26_A Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 1.75A {Homo sapiens} PDB: 1yuk_B* 1yuk_A* 2p28_A*
Probab=23.35 E-value=53 Score=24.59 Aligned_cols=15 Identities=33% Similarity=0.957 Sum_probs=12.5
Q ss_pred CeeeCCCCcccCCCC
Q psy2457 96 PVCTCLPGYVGDALT 110 (189)
Q Consensus 96 ~~c~c~~g~~~~~~~ 110 (189)
..|.|.+||.|..++
T Consensus 207 G~C~C~~g~~G~~Ce 221 (280)
T 2p26_A 207 GICRCDTGYIGKNCE 221 (280)
T ss_dssp TEEEECTTEESTTSC
T ss_pred CceeCCCCCcCCcce
Confidence 468999999999864
No 166
>2e26_A Reelin, reeler protein; signaling protein; HET: NAG BMA; 2.00A {Mus musculus} PDB: 3a7q_A*
Probab=22.07 E-value=35 Score=29.26 Aligned_cols=30 Identities=27% Similarity=0.733 Sum_probs=23.2
Q ss_pred CccccCCCCCEeeeCCCCeeeeCCCCCccCCcc
Q psy2457 137 ACTSQCGINAQCTARNHVATCSCPAGYQGDALS 169 (189)
Q Consensus 137 ~c~~~C~~~~~C~~~~g~~~C~C~~G~~g~~~~ 169 (189)
.|...|..+|.|++.. .|.|-+||.|..|.
T Consensus 187 ~C~~~C~g~G~C~~~~---~C~C~~g~~g~~C~ 216 (725)
T 2e26_A 187 QCEEMCYGHGSCINGT---KCICDPGYSGPTCK 216 (725)
T ss_dssp CCGGGGGGSEEEETTT---EEEECTTEESTTSC
T ss_pred CCccccCCCcEecCCC---eeeccCCcccCccc
Confidence 3555788889997543 79999999998753
Done!