Query psy2460
Match_columns 83
No_of_seqs 123 out of 1040
Neff 6.2
Searched_HMMs 29240
Date Fri Aug 16 16:52:32 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy2460.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/2460hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2if5_A Zinc finger and BTB dom 99.9 1.9E-22 6.5E-27 127.5 5.7 80 1-82 16-100 (120)
2 1r29_A B-cell lymphoma 6 prote 99.9 8.6E-22 2.9E-26 125.7 6.1 79 1-82 20-104 (127)
3 2ppi_A Gigaxonin; BTB domain, 99.8 1E-21 3.5E-26 128.9 5.6 80 1-82 38-124 (144)
4 3ohu_A Transcription regulator 99.8 2E-21 6.8E-26 123.7 5.6 78 1-82 23-106 (125)
5 3b84_A Zinc finger and BTB dom 99.8 1.1E-21 3.9E-26 124.5 4.4 76 1-82 15-95 (119)
6 2vkp_A BTB/POZ domain-containi 99.8 2.3E-21 7.7E-26 120.4 5.4 79 3-82 1-86 (109)
7 2vpk_A Myoneurin; transcriptio 99.8 5.7E-21 2E-25 120.2 5.6 76 1-82 13-95 (116)
8 2yy9_A Zinc finger and BTB dom 99.8 3.3E-21 1.1E-25 125.0 4.1 76 1-82 16-96 (135)
9 2ihc_A Transcription regulator 99.8 4.6E-21 1.6E-25 122.4 3.8 78 1-82 20-103 (124)
10 2z8h_A Transcription regulator 99.8 9E-21 3.1E-25 123.0 4.9 78 1-82 27-110 (138)
11 1buo_A POZ domain, protein (pr 99.8 1E-20 3.4E-25 120.3 4.4 75 1-82 19-98 (121)
12 3fkc_A Transcriptional regulat 99.8 1.7E-20 5.9E-25 119.1 4.6 75 1-82 22-102 (116)
13 3ga1_A Nucleus accumbens-assoc 99.8 1.6E-20 5.6E-25 120.4 4.5 76 1-82 24-105 (129)
14 3htm_A Speckle-type POZ protei 99.8 1.5E-20 5.3E-25 123.9 4.3 80 1-82 25-109 (172)
15 3hve_A Gigaxonin; ubiquitin, c 99.8 1.4E-20 4.9E-25 131.7 4.0 80 1-82 22-108 (256)
16 2q81_A MIZ-1 protein; BTB/POZ 99.8 1.6E-20 5.5E-25 119.2 3.8 75 1-82 18-97 (119)
17 4eoz_A Speckle-type POZ protei 99.8 9.5E-21 3.3E-25 122.0 1.5 80 1-82 16-100 (145)
18 3i3n_A Kelch-like protein 11; 99.8 2.3E-20 7.7E-25 132.3 0.5 80 1-82 23-116 (279)
19 3hqi_A Speckle-type POZ protei 99.8 3.5E-19 1.2E-23 127.5 4.4 80 1-82 165-249 (312)
20 3m5b_A Zinc finger and BTB dom 99.7 3.5E-18 1.2E-22 109.3 2.5 67 5-82 25-96 (119)
21 4ajy_C Transcription elongatio 98.7 1.6E-08 5.4E-13 62.4 5.3 67 13-82 4-89 (97)
22 2ast_A S-phase kinase-associat 98.6 4.4E-08 1.5E-12 65.1 4.6 49 13-64 3-54 (159)
23 1hv2_A Elongin C, ELC1; protei 97.1 0.00061 2.1E-08 42.0 4.2 48 13-64 6-54 (99)
24 2fnj_C Transcription elongatio 96.9 0.00085 2.9E-08 41.0 3.5 50 13-64 3-54 (96)
25 1fs1_B SKP1, cyclin A/CDK2-ass 96.7 0.00081 2.8E-08 43.6 2.5 45 13-64 4-49 (141)
26 2p1m_A SKP1-like protein 1A; F 96.3 0.0005 1.7E-08 45.5 -0.7 46 13-64 6-52 (160)
27 1vcb_B Protein (elongin C); tu 93.5 0.086 2.9E-06 33.0 3.9 50 13-64 19-70 (112)
28 3v7d_A Suppressor of kinetocho 90.8 0.24 8.3E-06 32.8 3.6 51 12-64 8-62 (169)
29 3drz_A BTB/POZ domain-containi 88.6 0.46 1.6E-05 29.0 3.4 50 13-65 8-62 (107)
No 1
>2if5_A Zinc finger and BTB domain-containing protein 7A; POZ domain, POK, proto oncogene, transcription F transcription; 2.00A {Homo sapiens} PDB: 2nn2_A
Probab=99.86 E-value=1.9e-22 Score=127.51 Aligned_cols=80 Identities=19% Similarity=0.190 Sum_probs=68.3
Q ss_pred ChhhhcCCCCccEEEEeCCcceeEehhHHHHhhhcHHHHHHhcCCCCCCCCCCCCCCCCCHHHHhh-----cCCcccccc
Q psy2460 1 MKFLASMPELCDVTFLVGDTREPVCAVKAVLAARSRVFHKMLYSAPSPQRKKDPPPKENKLRLFLK-----RSSEPLLNL 75 (83)
Q Consensus 1 m~~l~~~~~~~Dv~~~v~~~~~~~~aHk~iLaa~S~~F~~mf~~~~~e~~~~~v~i~dv~~~~f~~-----~~~~~~l~~ 75 (83)
|+.+++++.+|||+|.++| ++|+|||+|||++|+||++||.+++.|+....+.++++++++|.. |++.+.++.
T Consensus 16 l~~l~~~~~~~Dv~l~v~~--~~~~aHk~vLaa~S~~F~~~f~~~~~e~~~~~i~l~~~~~~~f~~ll~~~Yt~~~~~~~ 93 (120)
T 2if5_A 16 LNEQRTQGLLCDVVILVEG--REFPTHRSVLAACSQYFKKLFTSGAVVDQQNVYEIDFVSAEALTALMDFAYTATLTVST 93 (120)
T ss_dssp HHHHHHTTCSCCEEEEETT--EEEEECHHHHHHHCHHHHHHHHC-----CCSEEECCSSCHHHHHHHHHHHHHSCCCCCG
T ss_pred HHHHHhcCCCCCeEEEECC--EEEeHHHHHHHHhCHHHHHHhcCCccccCCceEEeCCCCHHHHHHHHHHHcCCCCccCH
Confidence 4678999999999999999 999999999999999999999999999988999999999998632 888888999
Q ss_pred cchhhhh
Q psy2460 76 QNEAKLF 82 (83)
Q Consensus 76 ~~~~~~~ 82 (83)
+|+.+++
T Consensus 94 ~~~~~ll 100 (120)
T 2if5_A 94 ANVGDIL 100 (120)
T ss_dssp GGHHHHH
T ss_pred HHHHHHH
Confidence 9988875
No 2
>1r29_A B-cell lymphoma 6 protein; BTB domain, transcriptional repression, transcription; 1.30A {Homo sapiens} SCOP: d.42.1.1 PDB: 1r28_A 1r2b_A 3bim_A 3lbz_A* 3e4u_A
Probab=99.85 E-value=8.6e-22 Score=125.73 Aligned_cols=79 Identities=24% Similarity=0.112 Sum_probs=71.3
Q ss_pred ChhhhcCCCCccEEEEeCCcceeEehhHHHHhhhcHHHHHHhcCCCCCCCCCCCCC-CCCCHHHHhh-----cCCccccc
Q psy2460 1 MKFLASMPELCDVTFLVGDTREPVCAVKAVLAARSRVFHKMLYSAPSPQRKKDPPP-KENKLRLFLK-----RSSEPLLN 74 (83)
Q Consensus 1 m~~l~~~~~~~Dv~~~v~~~~~~~~aHk~iLaa~S~~F~~mf~~~~~e~~~~~v~i-~dv~~~~f~~-----~~~~~~l~ 74 (83)
|+.+++++.+|||+|.+++ ++|+|||+|||++|+||++||.+++.| ....+.+ +++++++|.. |++.+.++
T Consensus 20 l~~l~~~~~~~Dv~l~v~~--~~~~aHk~iLaa~S~~F~~~f~~~~~e-~~~~i~l~~~~~~~~f~~ll~~~Ytg~~~~~ 96 (127)
T 1r29_A 20 LNRLRSRDILTDVVIVVSR--EQFRAHKTVLMACSGLFYSIFTDQLKR-NLSVINLDPEINPEGFNILLDFMYTSRLNLR 96 (127)
T ss_dssp HHHHHHTTCSCCEEEEETT--EEEEECHHHHHHHCHHHHHHHTSTTTT-TCSEEECCTTSCHHHHHHHHHHHHHSCCCCC
T ss_pred HHHHHhcCCCCCEEEEECC--EEEehHHHHHHHhCHHHHHHhcCCccC-CCCEEEeCCCCCHHHHHHHHHHHcCCCcCcC
Confidence 4678999999999999999 999999999999999999999999988 7788999 9999998632 88888899
Q ss_pred ccchhhhh
Q psy2460 75 LQNEAKLF 82 (83)
Q Consensus 75 ~~~~~~~~ 82 (83)
.+|+.+|+
T Consensus 97 ~~~~~~ll 104 (127)
T 1r29_A 97 EGNIMAVM 104 (127)
T ss_dssp TTTHHHHH
T ss_pred HHHHHHHH
Confidence 99988875
No 3
>2ppi_A Gigaxonin; BTB domain, protein degradation, structural genomics, struct genomics consortium, SGC, structural protein; 2.40A {Homo sapiens}
Probab=99.85 E-value=1e-21 Score=128.92 Aligned_cols=80 Identities=16% Similarity=0.180 Sum_probs=67.4
Q ss_pred ChhhhcCCCCccEEEEeCCcceeEehhHHHHhhhcHHHHHHhcCCCCC--CCCCCCCCCCCCHHHHhh-----cCCcccc
Q psy2460 1 MKFLASMPELCDVTFLVGDTREPVCAVKAVLAARSRVFHKMLYSAPSP--QRKKDPPPKENKLRLFLK-----RSSEPLL 73 (83)
Q Consensus 1 m~~l~~~~~~~Dv~~~v~~~~~~~~aHk~iLaa~S~~F~~mf~~~~~e--~~~~~v~i~dv~~~~f~~-----~~~~~~l 73 (83)
|+.+++++.+|||+|.++| ++|+|||+|||+||+||++||.+++.+ +....+.++|+++++|.. |++.+.+
T Consensus 38 l~~l~~~~~~~Dv~l~v~~--~~f~aHk~vLaa~S~yF~~mf~~~~~e~e~~~~~I~l~~v~~~~f~~lL~fiYtg~~~i 115 (144)
T 2ppi_A 38 LSSFREESRFCDAHLVLDG--EEIPVQKNILAAASPYIRTKLNYNPPKDDGSTYKIELEGISVMVMREILDYIFSGQIRL 115 (144)
T ss_dssp HHHTTC--CCCCEEEEETT--EEEEECHHHHHHHCHHHHHHHHHCC-----CCCEEECCSSCHHHHHHHHHHHTTSCCCC
T ss_pred HHHHHhcCCCcceEEEECC--EEEehHHHHHHHcCHHHHHHHcCCCccccCCCcEEEeCCCCHHHHHHHHHHHhCCCCCC
Confidence 4678999999999999999 999999999999999999999988765 567788899999988632 8889999
Q ss_pred cccchhhhh
Q psy2460 74 NLQNEAKLF 82 (83)
Q Consensus 74 ~~~~~~~~~ 82 (83)
+.+|+.+|+
T Consensus 116 ~~~~v~~ll 124 (144)
T 2ppi_A 116 NEDTIQDVV 124 (144)
T ss_dssp CTTTHHHHH
T ss_pred CHHHHHHHH
Confidence 999998876
No 4
>3ohu_A Transcription regulator protein BACH2; BTB/POZ domain; 2.10A {Homo sapiens} SCOP: d.42.1.0 PDB: 3ohv_A
Probab=99.84 E-value=2e-21 Score=123.72 Aligned_cols=78 Identities=27% Similarity=0.244 Sum_probs=69.3
Q ss_pred ChhhhcCCCCccEEEEeCCcceeEehhHHHHhhhcHHHHHHhcCCCCCCCCCCCCCCC-CCHHHHhh-----cCCccccc
Q psy2460 1 MKFLASMPELCDVTFLVGDTREPVCAVKAVLAARSRVFHKMLYSAPSPQRKKDPPPKE-NKLRLFLK-----RSSEPLLN 74 (83)
Q Consensus 1 m~~l~~~~~~~Dv~~~v~~~~~~~~aHk~iLaa~S~~F~~mf~~~~~e~~~~~v~i~d-v~~~~f~~-----~~~~~~l~ 74 (83)
|+.+++++.+|||+|.++| ++|+|||+|||++|+||++||.+++.+ ...+.+++ +++++|.. |++.+.++
T Consensus 23 l~~l~~~~~~~Dv~l~v~~--~~f~aHk~vLaa~S~yF~~~f~~~~~e--~~~i~l~~~~~~~~f~~~l~~iYtg~~~~~ 98 (125)
T 3ohu_A 23 LNDQRKKDILCDVTLIVER--KEFRAHRAVLAACSEYFWQALVGQTKN--DLVVSLPEEVTARGFGPLLQFAYTAKLLLS 98 (125)
T ss_dssp HHHHHHHTCSCCEEEEETT--EEEEECHHHHHHHBHHHHHHHTTCCCS--SCEEECCTTCCHHHHHHHHHHHTTSEEEEC
T ss_pred HHHHHhcCCccceEEEECC--EEEechHHHHHHcCHHHHHHhcCCCCC--CcEEEeCCCCCHHHHHHHHHhHcCCceEEC
Confidence 4688999999999999999 999999999999999999999998876 56788888 99987632 88999999
Q ss_pred ccchhhhh
Q psy2460 75 LQNEAKLF 82 (83)
Q Consensus 75 ~~~~~~~~ 82 (83)
.+|+.+++
T Consensus 99 ~~~v~~ll 106 (125)
T 3ohu_A 99 RENIREVI 106 (125)
T ss_dssp TTTHHHHH
T ss_pred HHHHHHHH
Confidence 99998875
No 5
>3b84_A Zinc finger and BTB domain-containing protein 48; krueppel related zinc finger protein 3, HKR3, ZBTB48, Z finger, oncogene; 1.74A {Homo sapiens}
Probab=99.84 E-value=1.1e-21 Score=124.50 Aligned_cols=76 Identities=18% Similarity=0.147 Sum_probs=67.6
Q ss_pred ChhhhcCCCCccEEEEeCCcceeEehhHHHHhhhcHHHHHHhcCCCCCCCCCCCCCCCCCHHHHhh-----cCCcccccc
Q psy2460 1 MKFLASMPELCDVTFLVGDTREPVCAVKAVLAARSRVFHKMLYSAPSPQRKKDPPPKENKLRLFLK-----RSSEPLLNL 75 (83)
Q Consensus 1 m~~l~~~~~~~Dv~~~v~~~~~~~~aHk~iLaa~S~~F~~mf~~~~~e~~~~~v~i~dv~~~~f~~-----~~~~~~l~~ 75 (83)
|+.+++++.+|||+|.+|| ++|+|||+|||++|+||++||.+++ ...+.++|+++++|.. |++...++.
T Consensus 15 l~~l~~~~~~~Dv~l~v~~--~~f~aHk~vLaa~S~yF~~~f~~~~----~~~i~l~~~~~~~f~~ll~~iYtg~~~~~~ 88 (119)
T 3b84_A 15 LNKQREKGQYCDATLDVGG--LVFKAHWSVLACCSHFFQSLYGDGS----GGSVVLPAGFAEIFGLLLDFFYTGHLALTS 88 (119)
T ss_dssp HHHHHHHTCSCCEEEEETT--EEEEECHHHHHHHCHHHHHHHTTTT----CCCEEECGGGHHHHHHHHHHHHHSCCCCCT
T ss_pred HHHHHhcCCCcceEEEECC--EEEEeeHHHHhhcCHHHHHHHCCCC----CCeEEeCCCCHHHHHHHHHHHcCCCCccCH
Confidence 4688999999999999999 9999999999999999999998876 5678889999987632 888889999
Q ss_pred cchhhhh
Q psy2460 76 QNEAKLF 82 (83)
Q Consensus 76 ~~~~~~~ 82 (83)
+|+++|+
T Consensus 89 ~~v~~ll 95 (119)
T 3b84_A 89 GNRDQVL 95 (119)
T ss_dssp TTHHHHH
T ss_pred HHHHHHH
Confidence 9998875
No 6
>2vkp_A BTB/POZ domain-containing protein 6; protein-binding; 1.9A {Homo sapiens}
Probab=99.84 E-value=2.3e-21 Score=120.36 Aligned_cols=79 Identities=27% Similarity=0.252 Sum_probs=64.5
Q ss_pred hhhcCCCCccEEEEeCCc--ceeEehhHHHHhhhcHHHHHHhcCCCCCCCCCCCCCCCCCHHHHhh-----cCCcccccc
Q psy2460 3 FLASMPELCDVTFLVGDT--REPVCAVKAVLAARSRVFHKMLYSAPSPQRKKDPPPKENKLRLFLK-----RSSEPLLNL 75 (83)
Q Consensus 3 ~l~~~~~~~Dv~~~v~~~--~~~~~aHk~iLaa~S~~F~~mf~~~~~e~~~~~v~i~dv~~~~f~~-----~~~~~~l~~ 75 (83)
+|++++.+|||+|.+++. ++.|+|||+|||++|+||++||.+++.|+. ..+.++|+++++|.. |++...++.
T Consensus 1 ~l~~~~~~~Dv~l~v~~~~~~~~~~~Hk~iLa~~S~~F~~~f~~~~~e~~-~~i~l~~~~~~~f~~~l~~iYt~~~~~~~ 79 (109)
T 2vkp_A 1 SMFNNELMADVHFVVGPPGATRTVPAHKYVLAVGSSVFYAMFYGDLAEVK-SEIHIPDVEPAAFLILLKYMYSDEIDLEA 79 (109)
T ss_dssp CCTTCCTTCCEEEEESSTTSCEEEEECHHHHHHHCHHHHHHHC------C-CEEEETTSCHHHHHHHHHHHHHCCCCCCT
T ss_pred CcccCCCcccEEEEECCCCCcEEEEeeHHHHHHcCHHHHHHhcCCcccCC-CeEEeCCCCHHHHHHHHHHHcCCCccCCH
Confidence 478999999999999872 479999999999999999999999999888 889999999998632 888889999
Q ss_pred cchhhhh
Q psy2460 76 QNEAKLF 82 (83)
Q Consensus 76 ~~~~~~~ 82 (83)
+|+.+++
T Consensus 80 ~~~~~ll 86 (109)
T 2vkp_A 80 DTVLATL 86 (109)
T ss_dssp TTHHHHH
T ss_pred HHHHHHH
Confidence 9988875
No 7
>2vpk_A Myoneurin; transcription regulation, transcription, metal-binding, alternative splicing, zinc, nucleus, BTB domain, zinc-finger, DNA-binding; 2.00A {Homo sapiens}
Probab=99.83 E-value=5.7e-21 Score=120.24 Aligned_cols=76 Identities=22% Similarity=0.210 Sum_probs=65.9
Q ss_pred ChhhhcCCCCccEEEEeCCcceeEehhHHHHhhhcHHHHHHhcCCCCCCCCCCCCCC--CCCHHHHhh-----cCCcccc
Q psy2460 1 MKFLASMPELCDVTFLVGDTREPVCAVKAVLAARSRVFHKMLYSAPSPQRKKDPPPK--ENKLRLFLK-----RSSEPLL 73 (83)
Q Consensus 1 m~~l~~~~~~~Dv~~~v~~~~~~~~aHk~iLaa~S~~F~~mf~~~~~e~~~~~v~i~--dv~~~~f~~-----~~~~~~l 73 (83)
|+.+++++.+|||+|.++| ++|+|||+|||++|+||++||.++ ..+.+.++ |+++++|.. |++.+.+
T Consensus 13 l~~l~~~~~~~Dv~l~v~~--~~~~aHk~vLaa~S~yF~~~f~~~----~~~~i~l~~~~~~~~~f~~ll~~~Yt~~~~~ 86 (116)
T 2vpk_A 13 LNKQREAGFLCDCTIVIGE--FQFKAHRNVLASFSEYFGAIYRST----SENNVFLDQSQVKADGFQKLLEFIYTGTLNL 86 (116)
T ss_dssp HHHHHHHTCSCCEEEEETT--EEEEECHHHHHHHCHHHHHHHTTC----CCSCEECCTTTCCHHHHHHHHHHHHHSCCCC
T ss_pred HHHHHhcCCCCcEEEEECC--EEEeccHHHHhhcCHHHHHHHcCC----CCCeEEeecCCCCHHHHHHHHHHHcCCCccc
Confidence 4688999999999999999 999999999999999999999876 24566666 999998632 8888889
Q ss_pred cccchhhhh
Q psy2460 74 NLQNEAKLF 82 (83)
Q Consensus 74 ~~~~~~~~~ 82 (83)
+.+|+.+++
T Consensus 87 ~~~~v~~ll 95 (116)
T 2vpk_A 87 DSWNVKEIH 95 (116)
T ss_dssp CTTTHHHHH
T ss_pred CHHHHHHHH
Confidence 999998875
No 8
>2yy9_A Zinc finger and BTB domain-containing protein 48; mouse, HKR3, structural genomics, NPPSFA; 2.60A {Mus musculus}
Probab=99.82 E-value=3.3e-21 Score=124.98 Aligned_cols=76 Identities=18% Similarity=0.156 Sum_probs=65.1
Q ss_pred ChhhhcCCCCccEEEEeCCcceeEehhHHHHhhhcHHHHHHhcCCCCCCCCCCCCCCCCCHHHHhh-----cCCcccccc
Q psy2460 1 MKFLASMPELCDVTFLVGDTREPVCAVKAVLAARSRVFHKMLYSAPSPQRKKDPPPKENKLRLFLK-----RSSEPLLNL 75 (83)
Q Consensus 1 m~~l~~~~~~~Dv~~~v~~~~~~~~aHk~iLaa~S~~F~~mf~~~~~e~~~~~v~i~dv~~~~f~~-----~~~~~~l~~ 75 (83)
|+.+|+++.+|||+|.|++ ++|+|||+|||++|+||++||.+++ ...+.++|+++++|.. |++++.++.
T Consensus 16 l~~l~~~~~~~Dv~l~v~~--~~f~aHk~vLaa~S~yF~~mf~~~~----~~~i~l~~~~~~~f~~lL~fiYtg~~~i~~ 89 (135)
T 2yy9_A 16 LNKQREKGQYCDATLDVGG--LVFKAHWSVLACCSHFFQRIYGDGT----GGSVVLPAGFAEIFGLLLDFFYTGHLALTS 89 (135)
T ss_dssp HHHHHHTTTTCCEEEEETT--EEEEECHHHHHHHCHHHHHTCC--------CCEEECGGGHHHHHHHHHHHHHSCCCCCT
T ss_pred HHHHHhcCCCcceEEEECC--EEEehHHHHHHHhCHHHHHHHcCCC----CCeEEeCCCCHHHHHHHHHHHhCCCCCCCH
Confidence 4789999999999999999 9999999999999999999999876 5678889999887632 888899999
Q ss_pred cchhhhh
Q psy2460 76 QNEAKLF 82 (83)
Q Consensus 76 ~~~~~~~ 82 (83)
+|+.+|+
T Consensus 90 ~~v~~ll 96 (135)
T 2yy9_A 90 GNRDQVL 96 (135)
T ss_dssp TTHHHHH
T ss_pred HHHHHHH
Confidence 9998876
No 9
>2ihc_A Transcription regulator protein BACH1; BRIC-A-BRAC domain,transcription factor, protein-PROT interaction; 2.44A {Homo sapiens}
Probab=99.82 E-value=4.6e-21 Score=122.43 Aligned_cols=78 Identities=23% Similarity=0.281 Sum_probs=65.5
Q ss_pred ChhhhcCCCCccEEEEeCCcceeEehhHHHHhhhcHHHHHHhcCCCCCCCCCCCCC-CCCCHHHHhh-----cCCccccc
Q psy2460 1 MKFLASMPELCDVTFLVGDTREPVCAVKAVLAARSRVFHKMLYSAPSPQRKKDPPP-KENKLRLFLK-----RSSEPLLN 74 (83)
Q Consensus 1 m~~l~~~~~~~Dv~~~v~~~~~~~~aHk~iLaa~S~~F~~mf~~~~~e~~~~~v~i-~dv~~~~f~~-----~~~~~~l~ 74 (83)
|+.+++++.+|||+|.++| ++|+|||+|||++|+||++||.+++.++ ..+.+ .++++++|.. |++.+.++
T Consensus 20 l~~l~~~~~~~Dv~l~v~~--~~~~aHk~vLaa~S~yF~~mf~~~~~e~--~~i~l~~~v~~~~f~~lL~~iYtg~~~i~ 95 (124)
T 2ihc_A 20 LNDQRKKDVLCDVTIFVEG--QRFRAHRSVLAACSSYFHSRIVGQADGE--LNITLPEEVTVKGFEPLIQFAYTAKLILS 95 (124)
T ss_dssp HHHHHHHTCSCCEEEEETT--EEEEECHHHHHHHBHHHHHHHTTC---C--EEEECCTTSCHHHHHHHHHHHHHSEEEEE
T ss_pred HHHHHhcCCCcCEEEEECC--EEEecHHHHHHHcCHHHHHHHcCCCCCC--ceEeecCCcCHHHHHHHHHHhcCCCcccC
Confidence 4688999999999999999 9999999999999999999999988764 45667 4899887632 88889999
Q ss_pred ccchhhhh
Q psy2460 75 LQNEAKLF 82 (83)
Q Consensus 75 ~~~~~~~~ 82 (83)
.+|+.+++
T Consensus 96 ~~~v~~ll 103 (124)
T 2ihc_A 96 KENVDEVC 103 (124)
T ss_dssp TTTHHHHH
T ss_pred HHHHHHHH
Confidence 99998875
No 10
>2z8h_A Transcription regulator protein BACH1; BTB, POZ, disulfide bond, activator, DNA-binding, nucleus, phosphorylation, repressor; 2.50A {Mus musculus}
Probab=99.82 E-value=9e-21 Score=122.98 Aligned_cols=78 Identities=24% Similarity=0.275 Sum_probs=67.5
Q ss_pred ChhhhcCCCCccEEEEeCCcceeEehhHHHHhhhcHHHHHHhcCCCCCCCCCCCCCC-CCCHHHHhh-----cCCccccc
Q psy2460 1 MKFLASMPELCDVTFLVGDTREPVCAVKAVLAARSRVFHKMLYSAPSPQRKKDPPPK-ENKLRLFLK-----RSSEPLLN 74 (83)
Q Consensus 1 m~~l~~~~~~~Dv~~~v~~~~~~~~aHk~iLaa~S~~F~~mf~~~~~e~~~~~v~i~-dv~~~~f~~-----~~~~~~l~ 74 (83)
|+.+++++.+|||+|.|+| ++|+|||+|||+||+||++||.+++.+. ..+.++ ++++++|.. |++++.++
T Consensus 27 l~~l~~~~~~~Dv~l~v~~--~~f~aHk~vLaa~S~yF~~~f~~~~~e~--~~i~l~~~v~~~~~~~lL~~~Ytg~~~i~ 102 (138)
T 2z8h_A 27 LNDQRKKDVLCDVTVLVEG--QRFRAHRSVLAACSSYFHSRIVGQTDAE--LTVTLPEEVTVKGFEPLIQFAYTAKLILS 102 (138)
T ss_dssp HHHHHHHTCSCCEEEEETT--EEEEECHHHHHHHCHHHHHHHTTCCCTT--EEEECCTTSCHHHHHHHHHHHHHSCCCCC
T ss_pred HHHHHhhCCCcCeEEEECC--EEEechHHHHHHcCHHHHHHHhcCCCCC--ceEEeCCCCCHHHHHHHHHHhcCCCcccC
Confidence 4688999999999999999 9999999999999999999999888763 466774 899887522 88889999
Q ss_pred ccchhhhh
Q psy2460 75 LQNEAKLF 82 (83)
Q Consensus 75 ~~~~~~~~ 82 (83)
.+|+.+|+
T Consensus 103 ~~~v~~ll 110 (138)
T 2z8h_A 103 KDNVDEVC 110 (138)
T ss_dssp TTTHHHHH
T ss_pred HHHHHHHH
Confidence 99998875
No 11
>1buo_A POZ domain, protein (promyelocytic leukemia zinc finger prote; protein-protein interaction domain, transcriptional represso finger protein; 1.90A {Homo sapiens} SCOP: d.42.1.1 PDB: 1cs3_A
Probab=99.81 E-value=1e-20 Score=120.26 Aligned_cols=75 Identities=17% Similarity=0.238 Sum_probs=66.0
Q ss_pred ChhhhcCCCCccEEEEeCCcceeEehhHHHHhhhcHHHHHHhcCCCCCCCCCCCCCCCCCHHHHhh-----cCCcccccc
Q psy2460 1 MKFLASMPELCDVTFLVGDTREPVCAVKAVLAARSRVFHKMLYSAPSPQRKKDPPPKENKLRLFLK-----RSSEPLLNL 75 (83)
Q Consensus 1 m~~l~~~~~~~Dv~~~v~~~~~~~~aHk~iLaa~S~~F~~mf~~~~~e~~~~~v~i~dv~~~~f~~-----~~~~~~l~~ 75 (83)
|+.+++++.+|||+|.++| ++|+|||+|||++|+||++||.++ ...+.++|+++++|.. |++...++.
T Consensus 19 l~~l~~~~~~~Dv~l~v~~--~~f~aHk~vLaa~S~yF~~~f~~~-----~~~i~l~~~~~~~f~~ll~~~Ytg~~~~~~ 91 (121)
T 1buo_A 19 ANQMRLAGTLCDVVIMVDS--QEFHAHRTVLACTSKMFEILFHRN-----SQHYTLDFLSPKTFQQILEYAYTATLQAKA 91 (121)
T ss_dssp HHHHHHHTTTCCEEEEESS--CEEEECHHHHHHHCHHHHHHTTSC-----CSEEEECSSCHHHHHHHHHHHHHSCCCCCG
T ss_pred HHHHHhcCCCCCEEEEECC--EEEehhHHHHhhcCHHHHHHHcCC-----CcEEEeCCCCHHHHHHHHHhhcCCCcCCCH
Confidence 4688999999999999999 999999999999999999999764 4578889999998632 888888999
Q ss_pred cchhhhh
Q psy2460 76 QNEAKLF 82 (83)
Q Consensus 76 ~~~~~~~ 82 (83)
+|+.+++
T Consensus 92 ~~~~~ll 98 (121)
T 1buo_A 92 EDLDDLL 98 (121)
T ss_dssp GGHHHHH
T ss_pred HHHHHHH
Confidence 9998875
No 12
>3fkc_A Transcriptional regulator kaiso; zinc finger and BTB domain containing 33, kaiso transcriptio ZNF-kaiso, ZNF348,wugsc:H_DJ525N14.1; 1.70A {Homo sapiens} PDB: 3m4t_A 3m8v_A
Probab=99.81 E-value=1.7e-20 Score=119.07 Aligned_cols=75 Identities=24% Similarity=0.249 Sum_probs=65.3
Q ss_pred ChhhhcCCCCccEEEEeCCcceeEehhHHHHhhhcHHHHHHhcCCCCCCCCCCCCCCCCCHHHHhh-----cCCcc-ccc
Q psy2460 1 MKFLASMPELCDVTFLVGDTREPVCAVKAVLAARSRVFHKMLYSAPSPQRKKDPPPKENKLRLFLK-----RSSEP-LLN 74 (83)
Q Consensus 1 m~~l~~~~~~~Dv~~~v~~~~~~~~aHk~iLaa~S~~F~~mf~~~~~e~~~~~v~i~dv~~~~f~~-----~~~~~-~l~ 74 (83)
|+.+++++.+|||+|.++| +.|+|||+|||++|+||++||.++ ...+.++++++++|.. |++.+ .++
T Consensus 22 l~~~~~~~~~~Dv~l~v~~--~~f~aHk~vLaa~S~~F~~~f~~~-----~~~i~l~~~~~~~f~~~l~~~Ytg~~~~~~ 94 (116)
T 3fkc_A 22 LNEQRGHGLFCDVTVIVED--RKFRAHKNILSASSTYFHQLFSVA-----GQVVELSFIRAEIFAEILNYIYSSKIVRVR 94 (116)
T ss_dssp HHHHHHHTTTCCEEEEETT--EEEEECHHHHHHHCHHHHHHTTSC-----CSEEEECSSCHHHHHHHHHHHTTSCCCSCC
T ss_pred HHHHHhcCCceeEEEEECC--EEEehhHHHHHHcCHHHHHHHcCC-----CCEEEeCCCCHHHHHHHHHhhcCCCcCCCC
Confidence 4678999999999999999 999999999999999999999875 4578889999997632 77777 799
Q ss_pred ccchhhhh
Q psy2460 75 LQNEAKLF 82 (83)
Q Consensus 75 ~~~~~~~~ 82 (83)
.+|+++++
T Consensus 95 ~~~~~~ll 102 (116)
T 3fkc_A 95 SDLLDELI 102 (116)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99988875
No 13
>3ga1_A Nucleus accumbens-associated protein 1; BTB/POZ domain, phosphoprotein, repressor, transcri transcription regulation; 2.10A {Homo sapiens}
Probab=99.81 E-value=1.6e-20 Score=120.39 Aligned_cols=76 Identities=21% Similarity=0.245 Sum_probs=67.2
Q ss_pred ChhhhcCCCCccEEEEeCCcceeEehhHHHHhhhcHHHHHHhcCCCCCCCCCCCCCC-CCCHHHHhh-----cCCccccc
Q psy2460 1 MKFLASMPELCDVTFLVGDTREPVCAVKAVLAARSRVFHKMLYSAPSPQRKKDPPPK-ENKLRLFLK-----RSSEPLLN 74 (83)
Q Consensus 1 m~~l~~~~~~~Dv~~~v~~~~~~~~aHk~iLaa~S~~F~~mf~~~~~e~~~~~v~i~-dv~~~~f~~-----~~~~~~l~ 74 (83)
|+.+++++.+|||+|.|+| ++|+|||+|||++|+||++||.++ ....+.++ ++++++|-. |++.+.++
T Consensus 24 l~~l~~~~~~~Dv~l~v~~--~~~~~Hk~vLaa~S~~F~~~f~~~----~~~~i~l~~~~~~~~f~~ll~~iYtg~~~i~ 97 (129)
T 3ga1_A 24 LNEQRLQGLYCDVSVVVKG--HAFKAHRAVLAASSSYFRDLFNNS----RSAVVELPAAVQPQSFQQILSFCYTGRLSMN 97 (129)
T ss_dssp HHHHHHTTCSCCEEEEETT--EEEEECHHHHHHHBHHHHHHHHHC----CCSEEECCTTCCHHHHHHHHHHHHHSEEECC
T ss_pred HHHHHhcCCCcceEEEECC--EEEEehHHHHHHcCHHHHHHHcCC----CCCEEEECCCCCHHHHHHHHHHHhCCccccC
Confidence 4678999999999999999 999999999999999999999876 56688886 899998632 88899999
Q ss_pred ccchhhhh
Q psy2460 75 LQNEAKLF 82 (83)
Q Consensus 75 ~~~~~~~~ 82 (83)
.+|+.+|+
T Consensus 98 ~~~~~~ll 105 (129)
T 3ga1_A 98 VGDQDLLM 105 (129)
T ss_dssp TTTHHHHH
T ss_pred HHHHHHHH
Confidence 99988875
No 14
>3htm_A Speckle-type POZ protein; BTB, SPOP, ubiquitin, ligase, nucleus, UBL conjugation pathway, protein binding; 2.50A {Homo sapiens}
Probab=99.80 E-value=1.5e-20 Score=123.89 Aligned_cols=80 Identities=21% Similarity=0.186 Sum_probs=72.0
Q ss_pred ChhhhcCCCCccEEEEeCCcceeEehhHHHHhhhcHHHHHHhcCCCCCCCCCCCCCCCCCHHHHhh-----cCCcccccc
Q psy2460 1 MKFLASMPELCDVTFLVGDTREPVCAVKAVLAARSRVFHKMLYSAPSPQRKKDPPPKENKLRLFLK-----RSSEPLLNL 75 (83)
Q Consensus 1 m~~l~~~~~~~Dv~~~v~~~~~~~~aHk~iLaa~S~~F~~mf~~~~~e~~~~~v~i~dv~~~~f~~-----~~~~~~l~~ 75 (83)
|+.+++++.+|||+|.++| ++|+|||+||+++|+||++||.+++.++....+.++|+++++|.. |+..+.++.
T Consensus 25 l~~l~~~~~~~Dv~l~v~~--~~~~~Hk~iL~~~S~~F~~~f~~~~~e~~~~~i~l~~~~~~~f~~~l~~~Yt~~~~~~~ 102 (172)
T 3htm_A 25 LGGLWENSRFTDCCLCVAG--QEFQAHKAILAARSPVFSAMFEHEMEESKKNRVEINDVEPEVFKEMMCFIYTGKAPNLD 102 (172)
T ss_dssp HHHHHHHTCSCCEEEEETT--EEEEECHHHHHHHCHHHHHHHHSCCCGGGTTEEEECSSCHHHHHHHHHHHHHSCCTTGG
T ss_pred HHHHHhCCCCcceEEEECC--EEEEeeHHHHHHcCHHHHHHHccCccccCCCeEEecCCCHHHHHHHHHHHhCCCCCCcH
Confidence 4678999999999999999 999999999999999999999999999988999999999998632 777888888
Q ss_pred cchhhhh
Q psy2460 76 QNEAKLF 82 (83)
Q Consensus 76 ~~~~~~~ 82 (83)
.|+.+++
T Consensus 103 ~~~~~ll 109 (172)
T 3htm_A 103 KMADDLL 109 (172)
T ss_dssp GTHHHHH
T ss_pred HHHHHHH
Confidence 8888775
No 15
>3hve_A Gigaxonin; ubiquitin, cytoplasm, cytoskeleton, disease mutation, kelch repeat, neurodegeneration, phosphoprotein, polymorphism, UBL conjugation; 2.80A {Homo sapiens} PDB: 3hve_B
Probab=99.80 E-value=1.4e-20 Score=131.73 Aligned_cols=80 Identities=16% Similarity=0.180 Sum_probs=61.9
Q ss_pred ChhhhcCCCCccEEEEeCCcceeEehhHHHHhhhcHHHHHHhcCCCC--CCCCCCCCCCCCCHHHHhh-----cCCcccc
Q psy2460 1 MKFLASMPELCDVTFLVGDTREPVCAVKAVLAARSRVFHKMLYSAPS--PQRKKDPPPKENKLRLFLK-----RSSEPLL 73 (83)
Q Consensus 1 m~~l~~~~~~~Dv~~~v~~~~~~~~aHk~iLaa~S~~F~~mf~~~~~--e~~~~~v~i~dv~~~~f~~-----~~~~~~l 73 (83)
|+.+++++.+|||+|.||| ++|+|||+|||++|+||++||.+++. ++....+.++++++++|.. |++.+.+
T Consensus 22 l~~l~~~~~~~Dv~l~v~~--~~f~~Hr~vLaa~S~yF~~mf~~~~~~~e~~~~~i~l~~v~~~~f~~ll~~~Yt~~~~i 99 (256)
T 3hve_A 22 LSSFREESRFCDAHLVLDG--EEIPVQKNILAAASPYIRTKLNYNPPKDDGSTYKIELEGISVMVMREILDYIFSGQIRL 99 (256)
T ss_dssp HHTCCC--CCCCEEEEETT--EEEEECHHHHHTTCHHHHHTC-----------CEEECSSCCHHHHHHHHHHHHHSCCCC
T ss_pred HHHHHhcCCCcceEEEECC--EEEechHHHHHHcCHHHHHHhCCCCCcccCCCCeEEeCCCCHHHHHHHHhhccCCCCcc
Confidence 4678999999999999999 99999999999999999999999887 5677889999999998632 8888999
Q ss_pred cccchhhhh
Q psy2460 74 NLQNEAKLF 82 (83)
Q Consensus 74 ~~~~~~~~~ 82 (83)
+.+|+.+++
T Consensus 100 ~~~~v~~ll 108 (256)
T 3hve_A 100 NEDTIQDVV 108 (256)
T ss_dssp C-CCHHHHH
T ss_pred cHhHHHHHH
Confidence 999998876
No 16
>2q81_A MIZ-1 protein; BTB/POZ domain, transcription; HET: PG4; 2.10A {Homo sapiens} PDB: 3m52_A
Probab=99.80 E-value=1.6e-20 Score=119.16 Aligned_cols=75 Identities=24% Similarity=0.225 Sum_probs=65.6
Q ss_pred ChhhhcCCCCccEEEEeCCcceeEehhHHHHhhhcHHHHHHhcCCCCCCCCCCCCCCCCCHHHHhh-----cCCcccccc
Q psy2460 1 MKFLASMPELCDVTFLVGDTREPVCAVKAVLAARSRVFHKMLYSAPSPQRKKDPPPKENKLRLFLK-----RSSEPLLNL 75 (83)
Q Consensus 1 m~~l~~~~~~~Dv~~~v~~~~~~~~aHk~iLaa~S~~F~~mf~~~~~e~~~~~v~i~dv~~~~f~~-----~~~~~~l~~ 75 (83)
|+.+|+++.+|||+|.++| ++|+|||+|||+||+||++||.++ ...+.++++++++|.. |++.+.++.
T Consensus 18 l~~l~~~~~~~Dv~l~v~~--~~~~aHk~vLaa~S~yF~~~f~~~-----~~~i~l~~~~~~~f~~ll~~~Ytg~~~i~~ 90 (119)
T 2q81_A 18 LNQQRQLGLLCDCTFVVDG--VHFKAHKAVLAACSEYFKMLFVDQ-----KDVVHLDISNAAGLGQVLEFMYTAKLSLSP 90 (119)
T ss_dssp HHHHHHHTCSCCEEEEETT--EEEEECHHHHHHHCHHHHHHHHHC-----CSGGGGGGCCHHHHHHHHHHHHHSCCCCCT
T ss_pred HHHHHhcCCCcceEEEECC--EEEehhHHHHHHcCHHHHHHHcCC-----CCEEEeCCCCHHHHHHHHHHHcCCCCccCH
Confidence 4788999999999999999 999999999999999999999862 4567888999887532 888899999
Q ss_pred cchhhhh
Q psy2460 76 QNEAKLF 82 (83)
Q Consensus 76 ~~~~~~~ 82 (83)
+|+.+++
T Consensus 91 ~~~~~ll 97 (119)
T 2q81_A 91 ENVDDVL 97 (119)
T ss_dssp TTHHHHH
T ss_pred HHHHHHH
Confidence 9998876
No 17
>4eoz_A Speckle-type POZ protein; E3 ubiquitin ligase, nucleus, protein binding; 2.40A {Homo sapiens}
Probab=99.79 E-value=9.5e-21 Score=121.95 Aligned_cols=80 Identities=21% Similarity=0.186 Sum_probs=71.3
Q ss_pred ChhhhcCCCCccEEEEeCCcceeEehhHHHHhhhcHHHHHHhcCCCCCCCCCCCCCCCCCHHHHhh-----cCCcccccc
Q psy2460 1 MKFLASMPELCDVTFLVGDTREPVCAVKAVLAARSRVFHKMLYSAPSPQRKKDPPPKENKLRLFLK-----RSSEPLLNL 75 (83)
Q Consensus 1 m~~l~~~~~~~Dv~~~v~~~~~~~~aHk~iLaa~S~~F~~mf~~~~~e~~~~~v~i~dv~~~~f~~-----~~~~~~l~~ 75 (83)
|+.+++++.+|||+|.++| +.|+|||+||+++|+||++||.+++.++....+.++++++++|.. |++...++.
T Consensus 16 l~~l~~~~~~~Dv~l~v~~--~~~~~Hk~iL~~~S~~F~~~f~~~~~e~~~~~i~l~~~~~~~~~~~l~~~Y~~~~~~~~ 93 (145)
T 4eoz_A 16 LGGLWENSRFTDCCLCVAG--QEFQAHKAILAARSPVFSAMFEHEMEESKKNRVEINDVEPEVFKEMMCFIYTGKAPNLD 93 (145)
T ss_dssp HHHHHHHTCSCCEEEEETT--EEEEECHHHHHHHCHHHHHHHHSSSHHHHHTEEEECSSCHHHHHHHHHHHHHSCCTTGG
T ss_pred HHHHHhCCCCcceEEEECC--EEEEeehHHHHHcCHHHHHHHcCCCcCCCCceEEecCCCHHHHHHHHHhhccCccCCcH
Confidence 4678999999999999999 999999999999999999999999888878899999999997632 777888888
Q ss_pred cchhhhh
Q psy2460 76 QNEAKLF 82 (83)
Q Consensus 76 ~~~~~~~ 82 (83)
+|+.+++
T Consensus 94 ~~~~~ll 100 (145)
T 4eoz_A 94 KMADDLL 100 (145)
T ss_dssp GTHHHHH
T ss_pred HHHHHHH
Confidence 8888775
No 18
>3i3n_A Kelch-like protein 11; structural genomics, BTB, KLHL11A, SGC, structural genomics consortium, kelch repeat, secreted, protein binding; 2.60A {Homo sapiens} PDB: 4ap2_A* 4apf_A
Probab=99.77 E-value=2.3e-20 Score=132.32 Aligned_cols=80 Identities=16% Similarity=0.152 Sum_probs=64.3
Q ss_pred ChhhhcCCCCccEEEEeC---CcceeEehhHHHHhhhcHHHHHHhcCCCCCCCCCCCCCC------CCCHHHHhh-----
Q psy2460 1 MKFLASMPELCDVTFLVG---DTREPVCAVKAVLAARSRVFHKMLYSAPSPQRKKDPPPK------ENKLRLFLK----- 66 (83)
Q Consensus 1 m~~l~~~~~~~Dv~~~v~---~~~~~~~aHk~iLaa~S~~F~~mf~~~~~e~~~~~v~i~------dv~~~~f~~----- 66 (83)
|+.+|+++.+|||+|.|| | ++|+|||+|||++|+||++||.+++.|+....+.++ ++++++|..
T Consensus 23 l~~l~~~~~~~Dv~l~v~~~~~--~~f~~Hr~vLaa~S~yF~~mf~~~~~e~~~~~i~l~~~~~~~~v~~~~f~~ll~~~ 100 (279)
T 3i3n_A 23 QNEQRRQGLFCDITLCFGGAGG--REFRAHRSVLAAATEYFTPLLSGQFSESRSGRVEMRKWSSEPGPEPDTVEAVIEYM 100 (279)
T ss_dssp HHHHHHHTTTCCEEEECC------CEEEECHHHHHHHCTTSGGGCCC--------EEECCCCSSTTCSCHHHHHHHHHHH
T ss_pred HHHHHhcCCCCCeEEEEcCCCC--eEEehHHHHHHHcCHHHHHHhcCCCccccCCeEEeccccccCCCCHHHHHHHHHhh
Confidence 478899999999999998 6 999999999999999999999999999998999998 889988632
Q ss_pred cCCcccccccchhhhh
Q psy2460 67 RSSEPLLNLQNEAKLF 82 (83)
Q Consensus 67 ~~~~~~l~~~~~~~~~ 82 (83)
|++.+.++.+|+.+++
T Consensus 101 Ytg~~~i~~~~v~~ll 116 (279)
T 3i3n_A 101 YTGRIRVSTGSVHEVL 116 (279)
T ss_dssp HHSEEEEETTTHHHHH
T ss_pred CcCCcccCHHHHHHHH
Confidence 8889999999998875
No 19
>3hqi_A Speckle-type POZ protein; SPOP, ubiquitin, puckered, nucleus, UBL conjugation pathway, protein binding, ligase; 2.62A {Homo sapiens} PDB: 3hu6_A
Probab=99.76 E-value=3.5e-19 Score=127.48 Aligned_cols=80 Identities=21% Similarity=0.186 Sum_probs=65.6
Q ss_pred ChhhhcCCCCccEEEEeCCcceeEehhHHHHhhhcHHHHHHhcCCCCCCCCCCCCCCCCCHHHHhh-----cCCcccccc
Q psy2460 1 MKFLASMPELCDVTFLVGDTREPVCAVKAVLAARSRVFHKMLYSAPSPQRKKDPPPKENKLRLFLK-----RSSEPLLNL 75 (83)
Q Consensus 1 m~~l~~~~~~~Dv~~~v~~~~~~~~aHk~iLaa~S~~F~~mf~~~~~e~~~~~v~i~dv~~~~f~~-----~~~~~~l~~ 75 (83)
|+.|++++.+|||+|.|+| ++|+|||+|||+|||||++||.+++.|+...++.++|+++++|.. |+..+.++.
T Consensus 165 l~~l~~~~~~~Dv~l~v~~--~~f~~Hk~vLaa~S~~F~~~f~~~~~e~~~~~i~l~~~~~~~f~~~L~~iYt~~~~~~~ 242 (312)
T 3hqi_A 165 LGGLWENSRFTDCCLCVAG--QEFQAHKAILAARSPVFSAMFEHEMEESKKNRVEINDVEPEVFKEMMCFIYTGKAPNLD 242 (312)
T ss_dssp HHHHHHTTCSCCEEEEETT--EEEEECHHHHHHHCHHHHHHTTC-----CCSEEEECSSCHHHHHHHHHHHHHSCCTTHH
T ss_pred HHHHHhCCCCCceEEEECC--EEEeHHHHHHHHcCHHHHHHhccCccccCCceEEecCCCHHHHHHHHHhhcCCCCCChH
Confidence 3568899999999999999 999999999999999999999999999999999999999998632 777776777
Q ss_pred cchhhhh
Q psy2460 76 QNEAKLF 82 (83)
Q Consensus 76 ~~~~~~~ 82 (83)
.++++|+
T Consensus 243 ~~~~~ll 249 (312)
T 3hqi_A 243 KMADDLL 249 (312)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 7777765
No 20
>3m5b_A Zinc finger and BTB domain-containing protein 32; POZ domain, BTB/POZ domain, ZBTB32, zinc finger domain-containing protein 32; 2.00A {Homo sapiens} SCOP: d.42.1.0
Probab=99.70 E-value=3.5e-18 Score=109.33 Aligned_cols=67 Identities=22% Similarity=0.177 Sum_probs=59.0
Q ss_pred hcCCCCccEEEEeCCcceeEehhHHHHhhhcHHHHHHhcCCCCCCCCCCCCCCCCCHHHHhh-----cCCcccccccchh
Q psy2460 5 ASMPELCDVTFLVGDTREPVCAVKAVLAARSRVFHKMLYSAPSPQRKKDPPPKENKLRLFLK-----RSSEPLLNLQNEA 79 (83)
Q Consensus 5 ~~~~~~~Dv~~~v~~~~~~~~aHk~iLaa~S~~F~~mf~~~~~e~~~~~v~i~dv~~~~f~~-----~~~~~~l~~~~~~ 79 (83)
|.++.+|||+|.||| ++|+|||+|||++|+||++ ....+.++++++++|.. |++++.++.+|++
T Consensus 25 r~~~~~~Dv~l~v~~--~~f~aHk~vLaa~S~yF~~---------~~~~i~l~~v~~~~f~~ll~fiYtg~~~i~~~~v~ 93 (119)
T 3m5b_A 25 RLRPALCDTLITVGS--QEFPAHSLVLAGVSQQLGR---------RGQWALGEGISPSTFAQLLNFVYGESVELQPGELR 93 (119)
T ss_dssp HHTTTTCCEEEEETT--EEEEECHHHHHTTCGGGCC---------CEEEECCSSCCHHHHHHHHHHHTTCCEEECGGGHH
T ss_pred HhcCCCcceEEEECC--EEEeeEHHHHHHcCHHHhc---------CCCEEEeCCCCHHHHHHHHHHHcCCCcCcCHHHHH
Confidence 668899999999999 9999999999999999985 23568889999998632 8999999999999
Q ss_pred hhh
Q psy2460 80 KLF 82 (83)
Q Consensus 80 ~~~ 82 (83)
+|+
T Consensus 94 ~ll 96 (119)
T 3m5b_A 94 PLQ 96 (119)
T ss_dssp HHH
T ss_pred HHH
Confidence 886
No 21
>4ajy_C Transcription elongation factor B polypeptide 1; E3 ubiquitin ligase, transcription factor, hypoxic signaling transcription; 1.73A {Homo sapiens} PDB: 2izv_C 3dcg_B 3zrc_B* 3zrf_B 3ztc_B* 3ztd_B* 3zun_B* 2c9w_C 4awj_B* 4b95_B* 4b9k_B* 2fnj_C 1lqb_B 1lm8_C 2jz3_C 2xai_B 4b9k_E*
Probab=98.74 E-value=1.6e-08 Score=62.43 Aligned_cols=67 Identities=12% Similarity=0.116 Sum_probs=45.8
Q ss_pred EEEEe-CCcceeEehhHHHHhhhcHHHHHHhcC--CCCCCCCCCCCCCCCCHHHH------hh----cC---Cccc---c
Q psy2460 13 VTFLV-GDTREPVCAVKAVLAARSRVFHKMLYS--APSPQRKKDPPPKENKLRLF------LK----RS---SEPL---L 73 (83)
Q Consensus 13 v~~~v-~~~~~~~~aHk~iLaa~S~~F~~mf~~--~~~e~~~~~v~i~dv~~~~f------~~----~~---~~~~---l 73 (83)
|+++. +| ++|.+||.+ |++|+||++||.+ ++.|...+.|++++|++.++ .+ ++ ..+. +
T Consensus 4 v~L~SsDg--~~F~v~r~v-A~~S~~ik~m~~~~~~~~E~~~~~I~l~~V~~~iL~kViey~~~h~~~~~~~~~i~~~~i 80 (97)
T 4ajy_C 4 VKLISSDG--HEFIVKREH-ALTSGTIKAMLSGPGQFAENETNEVNFREIPSHVLSKVCMYFTYKVRYTNSSTEIPEFPI 80 (97)
T ss_dssp EEEECTTC--CEEEEEHHH-HTTSHHHHHHHCCC--------CEEECTTSCHHHHHHHHHHHHHHHHHTTCCSCCCCCCC
T ss_pred EEEEecCC--cEEEecHHH-HHHhHHHHHHHHhCCCccccCCCceECCCCCHHHHHHHHHHHHHhcccCCCcCCCCcCcC
Confidence 44543 44 999999999 9999999999987 66777778899999998864 32 23 3444 6
Q ss_pred cccchhhhh
Q psy2460 74 NLQNEAKLF 82 (83)
Q Consensus 74 ~~~~~~~~~ 82 (83)
+.+++.+|+
T Consensus 81 ~~~~l~eLl 89 (97)
T 4ajy_C 81 APEIALELL 89 (97)
T ss_dssp CGGGHHHHH
T ss_pred CHHHHHHHH
Confidence 777787775
No 22
>2ast_A S-phase kinase-associated protein 1A; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} PDB: 2ass_A* 2e31_B 2e32_B 3l2o_A 1p22_B* 2ovr_A* 2ovp_A 1fqv_B* 2ovq_A*
Probab=98.60 E-value=4.4e-08 Score=65.06 Aligned_cols=49 Identities=12% Similarity=0.094 Sum_probs=37.7
Q ss_pred EEEEe-CCcceeEehhHHHHhhhcHHHHHHhcC-CCC-CCCCCCCCCCCCCHHHH
Q psy2460 13 VTFLV-GDTREPVCAVKAVLAARSRVFHKMLYS-APS-PQRKKDPPPKENKLRLF 64 (83)
Q Consensus 13 v~~~v-~~~~~~~~aHk~iLaa~S~~F~~mf~~-~~~-e~~~~~v~i~dv~~~~f 64 (83)
|++.. +| ..|.+||.+ |++|+||++||.+ ++. +...+.|++++|+..++
T Consensus 3 v~L~ssDg--~~f~v~~~v-A~~S~~i~~m~~~~~~~~e~~~~~Ipl~~V~~~iL 54 (159)
T 2ast_A 3 IKLQSSDG--EIFEVDVEI-AKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAIL 54 (159)
T ss_dssp EEEECTTS--CEEEEEHHH-HHTCHHHHHHTTSSCSS------CEECTTSCHHHH
T ss_pred EEEEcCCC--CEEEeCHHH-HHHhHHHHHHHHhcCCcccccCCCcCCCCccHHHH
Confidence 66664 56 999999999 9999999999987 666 67778899999998764
No 23
>1hv2_A Elongin C, ELC1; protein-peptide complex, signaling protein; NMR {Saccharomyces cerevisiae} SCOP: d.42.1.1
Probab=97.11 E-value=0.00061 Score=41.98 Aligned_cols=48 Identities=17% Similarity=0.133 Sum_probs=38.7
Q ss_pred EEEEe-CCcceeEehhHHHHhhhcHHHHHHhcCCCCCCCCCCCCCCCCCHHHH
Q psy2460 13 VTFLV-GDTREPVCAVKAVLAARSRVFHKMLYSAPSPQRKKDPPPKENKLRLF 64 (83)
Q Consensus 13 v~~~v-~~~~~~~~aHk~iLaa~S~~F~~mf~~~~~e~~~~~v~i~dv~~~~f 64 (83)
|++.. +| ..|.+++.+ |.+|.+++.|+.+++ +...+.+++++|+..++
T Consensus 6 v~L~SsDg--~~f~V~~~v-A~~S~~ik~ml~~~~-e~~~~~Iplp~V~~~iL 54 (99)
T 1hv2_A 6 VTLVSKDD--KEYEISRSA-AMISPTLKAMIEGPF-RESKGRIELKQFDSHIL 54 (99)
T ss_dssp EEEEETTT--EEEEEEHHH-HTTCHHHHHHHHSST-TTCTTEEEETTSCHHHH
T ss_pred EEEEecCC--CEEEECHHH-HHHhHHHHHHHhccc-ccCCCceecCCcCHHHH
Confidence 55655 45 999999996 999999999998865 55557889999997764
No 24
>2fnj_C Transcription elongation factor B polypeptide 1; beta-sandwich, lectin-like, SPRY, protein transport/signaling protein complex; 1.80A {Mus musculus} SCOP: d.42.1.1 PDB: 1lqb_B 1lm8_C 2jz3_C 2xai_B 2c9w_C 2izv_C 3dcg_B 3zrc_B* 3zrf_B
Probab=96.90 E-value=0.00085 Score=41.04 Aligned_cols=50 Identities=12% Similarity=0.131 Sum_probs=34.7
Q ss_pred EEEEeCCcceeEehhHHHHhhhcHHHHHHhcC-CC-CCCCCCCCCCCCCCHHHH
Q psy2460 13 VTFLVGDTREPVCAVKAVLAARSRVFHKMLYS-AP-SPQRKKDPPPKENKLRLF 64 (83)
Q Consensus 13 v~~~v~~~~~~~~aHk~iLaa~S~~F~~mf~~-~~-~e~~~~~v~i~dv~~~~f 64 (83)
|++.. .+|.+|.+++.+ |.+|++++.|+.+ +. .|...+.+++++|+..++
T Consensus 3 v~L~S-sDg~~f~V~~~~-A~~S~~ik~ml~~~~~~~e~~~~~Ipl~~V~~~iL 54 (96)
T 2fnj_C 3 VKLIS-SDGHEFIVKREH-ALTSGTIKAMLSGPGQFAENETNEVNFREIPSHVL 54 (96)
T ss_dssp EEEEC-TTSCEEEEEHHH-HTTSHHHHHHHHCC--------CEEECSSCCHHHH
T ss_pred EEEEe-cCCCEEEeCHHH-HHHhHHHHHHHHccCCcccccCCceeCCCCCHHHH
Confidence 44544 224999999996 8999999999986 33 455567899999997764
No 25
>1fs1_B SKP1, cyclin A/CDK2-associated P45; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.157.1.1 d.42.1.1 PDB: 1fs2_B 1ldk_D
Probab=96.72 E-value=0.00081 Score=43.61 Aligned_cols=45 Identities=13% Similarity=0.091 Sum_probs=36.1
Q ss_pred EEEEe-CCcceeEehhHHHHhhhcHHHHHHhcCCCCCCCCCCCCCCCCCHHHH
Q psy2460 13 VTFLV-GDTREPVCAVKAVLAARSRVFHKMLYSAPSPQRKKDPPPKENKLRLF 64 (83)
Q Consensus 13 v~~~v-~~~~~~~~aHk~iLaa~S~~F~~mf~~~~~e~~~~~v~i~dv~~~~f 64 (83)
|++.. +| ..|.+|+.+ |.+|+++++||.+.. .+.|++++|+..++
T Consensus 4 v~L~SsDg--~~f~v~~~v-A~~S~~ik~ml~~~~----~~~Ipl~~V~~~iL 49 (141)
T 1fs1_B 4 IKLQSSDG--EIFEVDVEI-AKQSVTIKTMLEDLG----MDPVPLPNVNAAIL 49 (141)
T ss_dssp EEEECTTS--CEEEEEGGG-GGTCHHHHHHHHHTC----CSSEECTTCCHHHH
T ss_pred EEEEeCCC--CEEEecHHH-HHHhHHHHHHHHhcC----CCceecCCcCHHHH
Confidence 55655 44 999999998 999999999997631 45788899998764
No 26
>2p1m_A SKP1-like protein 1A; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_A* 2p1o_A* 2p1p_A* 2p1q_A* 3c6n_A* 3c6o_A* 3c6p_A* 3ogk_A* 3ogl_A* 3ogm_A*
Probab=96.25 E-value=0.0005 Score=45.47 Aligned_cols=46 Identities=15% Similarity=0.159 Sum_probs=20.3
Q ss_pred EEEEe-CCcceeEehhHHHHhhhcHHHHHHhcCCCCCCCCCCCCCCCCCHHHH
Q psy2460 13 VTFLV-GDTREPVCAVKAVLAARSRVFHKMLYSAPSPQRKKDPPPKENKLRLF 64 (83)
Q Consensus 13 v~~~v-~~~~~~~~aHk~iLaa~S~~F~~mf~~~~~e~~~~~v~i~dv~~~~f 64 (83)
|++.. +| ..|.+|+.+ |.+|++|+.||.+.. ..+.|++++|+..++
T Consensus 6 v~L~SsDg--~~f~v~~~v-A~~S~~ik~ml~~~~---~~~~Ipl~~V~~~iL 52 (160)
T 2p1m_A 6 IVLKSSDG--ESFEVEEAV-ALESQTIAHMVEDDC---VDNGVPLPNVTSKIL 52 (160)
T ss_dssp --CCC-----------CHH-HHTCTTTC---------------CCTTSCHHHH
T ss_pred EEEEcCCC--CEEEECHHH-HHHhHHHHHHHHccC---CCCceeCCcCcHHHH
Confidence 45543 45 999999998 899999999997643 235788899998864
No 27
>1vcb_B Protein (elongin C); tumor suppressor, cancer, ubiquitin, beta sandwich, transcription, transcriptional elongation; 2.70A {Homo sapiens} SCOP: d.42.1.1
Probab=93.55 E-value=0.086 Score=32.95 Aligned_cols=50 Identities=12% Similarity=0.115 Sum_probs=34.2
Q ss_pred EEEEeCCcceeEehhHHHHhhhcHHHHHHhcCC--CCCCCCCCCCCCCCCHHHH
Q psy2460 13 VTFLVGDTREPVCAVKAVLAARSRVFHKMLYSA--PSPQRKKDPPPKENKLRLF 64 (83)
Q Consensus 13 v~~~v~~~~~~~~aHk~iLaa~S~~F~~mf~~~--~~e~~~~~v~i~dv~~~~f 64 (83)
|+++ ..++..|.+++. .|..|..++.|+... ..+...+.++++.|+..++
T Consensus 19 v~L~-SsDG~~F~V~~~-~A~~S~tIk~ml~~~~~~~e~~~~~IplpnV~s~iL 70 (112)
T 1vcb_B 19 VKLI-SSDGHEFIVKRE-HALTSGTIKAMLSGPGQFAENETNEVNFREIPSHVL 70 (112)
T ss_dssp EEEE-CTTSCEEEEEHH-HHHTSHHHHHHSSCC--------CEEECSSCCHHHH
T ss_pred EEEE-cCCCCEEEECHH-HHHHhHHHHHHHHhcCCcccccCCceeCCCCCHHHH
Confidence 4454 233499999998 588999999999752 2344456788999987764
No 28
>3v7d_A Suppressor of kinetochore protein 1; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_A* 3mks_A*
Probab=90.77 E-value=0.24 Score=32.77 Aligned_cols=51 Identities=16% Similarity=0.185 Sum_probs=34.7
Q ss_pred cEEEEeCCcceeEehhHHHHhhhcHHHHHHhcCCCCC----CCCCCCCCCCCCHHHH
Q psy2460 12 DVTFLVGDTREPVCAVKAVLAARSRVFHKMLYSAPSP----QRKKDPPPKENKLRLF 64 (83)
Q Consensus 12 Dv~~~v~~~~~~~~aHk~iLaa~S~~F~~mf~~~~~e----~~~~~v~i~dv~~~~f 64 (83)
-|+++. .+|..|.+++.+ |..|.+++.|+.....+ .....|++++|+..++
T Consensus 8 ~i~L~S-sDG~~F~V~~~v-A~~S~tIk~ml~~~~~~~~~~~~~~~IplpnV~s~iL 62 (169)
T 3v7d_A 8 NVVLVS-GEGERFTVDKKI-AERSLLLKNYLNDMGDDDDEDDDEIVMPVPNVRSSVL 62 (169)
T ss_dssp EEEEEC-TTCCEEEEEHHH-HTTSHHHHHHHHC-----------CEEECTTCCHHHH
T ss_pred eEEEEe-CCCCEEEecHHH-HHHhHHHHHHHHhcCcccccccCCCceeeCCCCHHHH
Confidence 355554 334999999997 88899999999753321 2336788899987764
No 29
>3drz_A BTB/POZ domain-containing protein KCTD5; potassium channel domain T1, pentamer, unkno function; 1.90A {Homo sapiens}
Probab=88.63 E-value=0.46 Score=29.01 Aligned_cols=50 Identities=12% Similarity=0.140 Sum_probs=36.1
Q ss_pred EEEEeCCcceeEehhHHHHhhhc-HHHHHHhcCCCC----CCCCCCCCCCCCCHHHHh
Q psy2460 13 VTFLVGDTREPVCAVKAVLAARS-RVFHKMLYSAPS----PQRKKDPPPKENKLRLFL 65 (83)
Q Consensus 13 v~~~v~~~~~~~~aHk~iLaa~S-~~F~~mf~~~~~----e~~~~~v~i~dv~~~~f~ 65 (83)
|++-||| +.|...+..|+... .+|.+||.+... ....+++-| |-+|..|-
T Consensus 8 v~LNVGG--~~f~t~~~TL~~~p~s~L~~~~~~~~~~~~~~d~~~~~fi-DRdp~~F~ 62 (107)
T 3drz_A 8 VRLNVGG--TYFLTTRQTLCRDPKSFLYRLCQADPDLDSDKDETGAYLI-DRDPTYFG 62 (107)
T ss_dssp EEEEETT--EEEEEEHHHHTSSTTSHHHHHHTTCGGGGGGBCTTSCEEE-CSCHHHHH
T ss_pred EEEEECC--EEEEECHHHHhcCCCcchhHHHhcCCCCCcCCCCCceEEe-cCChHHHH
Confidence 6778999 99999999998765 578999875421 113344544 77899873
Done!