Your job contains 1 sequence.
>psy2466
MNVAGNSLFDIIETEPAANEDENCLSVQKVLETIKTAWKNEKLSPEILPNKVEYIDCMLE
QIKQMEENIEKLRKDDIRIEIHRMEIERIRFVITSYLRVRIEKIEKFTLDIVQQDFERSS
DNMYLSHDELKYAKSYLKSIDNHFDKYLNMLPPNLRTLEENKKLIKPDLNTYVFLRAGKD
VANVYIRDMSENKEDEFVLDEGSQHILPYESIAEFVKNNDVQLL
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy2466
(224 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0039403 - symbol:Sld5 "Sld5" species:7227 "Drosoph... 361 4.1e-33 1
UNIPROTKB|A2VE40 - symbol:GINS4 "DNA replication complex ... 359 6.7e-33 1
RGD|1307397 - symbol:Gins4 "GINS complex subunit 4 (Sld5 ... 358 8.5e-33 1
UNIPROTKB|Q499W2 - symbol:Gins4 "DNA replication complex ... 358 8.5e-33 1
UNIPROTKB|F1SE31 - symbol:GINS4 "Uncharacterized protein"... 357 1.1e-32 1
MGI|MGI:1923847 - symbol:Gins4 "GINS complex subunit 4 (S... 357 1.1e-32 1
UNIPROTKB|F6X4M2 - symbol:GINS4 "Uncharacterized protein"... 354 2.3e-32 1
ZFIN|ZDB-GENE-040801-59 - symbol:zgc:100817 "zgc:100817" ... 350 6.0e-32 1
UNIPROTKB|E2R2C7 - symbol:GINS4 "Uncharacterized protein"... 349 7.7e-32 1
UNIPROTKB|Q9BRT9 - symbol:GINS4 "DNA replication complex ... 343 3.3e-31 1
UNIPROTKB|Q7ZT48 - symbol:gins4 "Sld5" species:8355 "Xeno... 327 1.6e-29 1
UNIPROTKB|E5RFF9 - symbol:GINS4 "DNA replication complex ... 284 5.9e-25 1
WB|WBGene00013768 - symbol:Y113G7B.24c species:6239 "Caen... 229 4.0e-19 1
TAIR|locus:2154329 - symbol:SLD5 "AT5G49010" species:3702... 184 2.3e-14 1
POMBASE|SPBP4H10.21c - symbol:sld5 "GINS complex subunit ... 182 3.8e-14 1
DICTYBASE|DDB_G0269324 - symbol:gins4 "GINS complex subun... 158 1.3e-11 1
UNIPROTKB|G4MTZ4 - symbol:MGG_01611 "DNA replication comp... 151 1.8e-10 1
SGD|S000002897 - symbol:SLD5 "Subunit of the GINS complex... 107 4.1e-08 2
CGD|CAL0000861 - symbol:SLD5 species:5476 "Candida albica... 126 2.5e-06 1
UNIPROTKB|Q5ACL1 - symbol:SLD5 "Potential GINS DNA replic... 126 2.5e-06 1
ASPGD|ASPL0000016356 - symbol:AN3940 species:162425 "Emer... 79 0.00092 2
>FB|FBgn0039403 [details] [associations]
symbol:Sld5 "Sld5" species:7227 "Drosophila melanogaster"
[GO:0043138 "3'-5' DNA helicase activity" evidence=IDA] [GO:0045750
"positive regulation of S phase of mitotic cell cycle"
evidence=IMP] [GO:0000811 "GINS complex" evidence=IDA] [GO:0000278
"mitotic cell cycle" evidence=IMP] [GO:0022008 "neurogenesis"
evidence=IMP] [GO:0046331 "lateral inhibition" evidence=IMP]
EMBL:AE014297 GO:GO:0022008 GO:GO:0006260 GO:GO:0046331
GO:GO:0045750 GO:GO:0000278 InterPro:IPR021151 Pfam:PF05916
GO:GO:0000811 eggNOG:COG5086 GeneTree:ENSGT00390000003246 KO:K10735
OMA:AFAKEYM InterPro:IPR008591 PANTHER:PTHR21206 PIRSF:PIRSF007764
RefSeq:NP_651457.1 SMR:Q9VBI1 IntAct:Q9VBI1 MINT:MINT-309995
STRING:Q9VBI1 EnsemblMetazoa:FBtr0084975 GeneID:43166
KEGG:dme:Dmel_CG14549 UCSC:CG14549-RA CTD:43166 FlyBase:FBgn0039403
InParanoid:Q9VBI1 OrthoDB:EOG4SBCF4 GenomeRNAi:43166 NextBio:832517
Uniprot:Q9VBI1
Length = 228
Score = 361 (132.1 bits), Expect = 4.1e-33, P = 4.1e-33
Identities = 74/211 (35%), Positives = 124/211 (58%)
Query: 15 EPAANEDENCLSVQKVLETIKTAWKNEKLSPEILPNKVEYIDCMLEQIKQMEENIEKLRK 74
E ++D ++ QKVLE I+TAW NE +PEILP++ + ++ M+ Q+ MEE + L K
Sbjct: 23 EDEDDDDMEQITAQKVLEIIETAWINEMCAPEILPSQTDMLELMVSQVAHMEEQMRDLDK 82
Query: 75 DDXXXXXXXXXXXXXXFVITSYLRVRIEKIEKFTLDIVQQDFERSSDNMYLSHDELKYAK 134
+D +++ SYLR R++KIE FT I+ Q+ R D+ LS +E K+A+
Sbjct: 83 NDFRAVVHSMELERVRYIMASYLRCRLQKIETFTQHILNQEESREPDDKRLSPEETKFAQ 142
Query: 135 SYLKSIDNHFDKYLNMLPPNLRTLEENKKLIKPDLNTYVFLRAGKDVANVYIRDMSENKE 194
+ ++D +F K PN + E ++++ P+L ++VFL+A NV + + +
Sbjct: 143 EFASNVDEYFHKVATQYMPNQQRGEAEQRIVTPNLMSHVFLKA-----NVAVPAVIVGVD 197
Query: 195 DEFV-LDEGSQHILPYESIAEFVKNNDVQLL 224
DE V + GSQHI+PY+ +A+ ++NN QL+
Sbjct: 198 DEEVDMAAGSQHIIPYQLVADLIQNNQAQLI 228
>UNIPROTKB|A2VE40 [details] [associations]
symbol:GINS4 "DNA replication complex GINS protein SLD5"
species:9913 "Bos taurus" [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006260 "DNA replication"
evidence=IEA] GO:GO:0005634 GO:GO:0005737 GO:GO:0006260
InterPro:IPR021151 Pfam:PF05916 EMBL:BC133560 IPI:IPI00693442
RefSeq:NP_001075929.1 UniGene:Bt.48705 ProteinModelPortal:A2VE40
SMR:A2VE40 STRING:A2VE40 PRIDE:A2VE40 Ensembl:ENSBTAT00000022773
GeneID:616799 KEGG:bta:616799 CTD:84296 eggNOG:COG5086
GeneTree:ENSGT00390000003246 HOGENOM:HOG000215319
HOVERGEN:HBG059490 InParanoid:A2VE40 KO:K10735 OMA:AFAKEYM
OrthoDB:EOG4RFKTG NextBio:20900323 InterPro:IPR008591
PANTHER:PTHR21206 PIRSF:PIRSF007764 Uniprot:A2VE40
Length = 223
Score = 359 (131.4 bits), Expect = 6.7e-33, P = 6.7e-33
Identities = 71/218 (32%), Positives = 131/218 (60%)
Query: 10 DIIETEPAANEDENCLSVQKVLETIKTAWKNEKLSPEILPNKVEYIDCMLEQIKQMEENI 69
D++ + + +E L+ ++++ ++ AW NEK +PE+L NK E ++C++EQ++ MEEN+
Sbjct: 6 DLLGQDSDGDSEEVILTPAELIDRLEQAWMNEKFAPELLENKSEIVECVMEQLEHMEENL 65
Query: 70 EKLRKDDXXXXXXXXXXXXXXFVITSYLRVRIEKIEKFTLDIVQQD-FERSSDNMYLSHD 128
++ +K D FV++SYLR R+ KIEKF ++++ R + LS +
Sbjct: 66 KRAKKGDLKVSIHQMEMERIRFVLSSYLRCRLMKIEKFFPHTLEKEKTRREEEPPILSPE 125
Query: 129 ELKYAKSYLKSIDNHF-DKYLNMLPPNLRTLEENKKLIKPDLNTYVFLRAGKDVANVYIR 187
EL +AK +L + + + D L +PPNL+ ++ + + KPDL+ YVFLR + N+ +
Sbjct: 126 ELVFAKEFLANTETYLKDTALKHMPPNLQKVDLLRTVPKPDLDAYVFLRVKERQENILVE 185
Query: 188 DMSENKEDEFV-LDEGSQHILPYESIAEFVKNNDVQLL 224
++ + D + L+EGSQH++ Y ++A V + +QL+
Sbjct: 186 PENDEQRDYVIDLEEGSQHLMRYRTVAPLVASGAIQLI 223
>RGD|1307397 [details] [associations]
symbol:Gins4 "GINS complex subunit 4 (Sld5 homolog)"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=IEA;ISO]
[GO:0006260 "DNA replication" evidence=IEA] RGD:1307397
GO:GO:0005634 GO:GO:0005737 GO:GO:0006260 InterPro:IPR021151
Pfam:PF05916 CTD:84296 eggNOG:COG5086 HOGENOM:HOG000215319
HOVERGEN:HBG059490 KO:K10735 OrthoDB:EOG4RFKTG InterPro:IPR008591
PANTHER:PTHR21206 PIRSF:PIRSF007764 EMBL:BC099741 IPI:IPI00189899
RefSeq:NP_001025198.1 UniGene:Rn.103411 ProteinModelPortal:Q499W2
SMR:Q499W2 STRING:Q499W2 PhosphoSite:Q499W2 PRIDE:Q499W2
GeneID:290842 KEGG:rno:290842 UCSC:RGD:1307397 InParanoid:Q499W2
NextBio:631749 Genevestigator:Q499W2 Uniprot:Q499W2
Length = 223
Score = 358 (131.1 bits), Expect = 8.5e-33, P = 8.5e-33
Identities = 72/207 (34%), Positives = 127/207 (61%)
Query: 21 DENCLSVQKVLETIKTAWKNEKLSPEILPNKVEYIDCMLEQIKQMEENIEKLRKDDXXXX 80
+E L+ +++E ++ AW NEK +PE+L +K E ++C++EQ++ MEEN+ + +K D
Sbjct: 17 EEVVLTPAELIERLEQAWMNEKFAPELLESKSEIVECVMEQLEHMEENLRRAKKGDLKVS 76
Query: 81 XXXXXXXXXXFVITSYLRVRIEKIEKFTLDIVQQDFER-SSDNMYLSHDELKYAKSYLKS 139
+V++SYLR R+ KIEKF I++++ R + + LS +E +AK Y+
Sbjct: 77 IHRMEMERIRYVLSSYLRCRLMKIEKFFPHILEKEKTRPAGEPSSLSPEEFVFAKEYMDH 136
Query: 140 IDNHFDKY-LNMLPPNLRTLEENKKLIKPDLNTYVFLRAGKDVANVYIRDMSENKEDEFV 198
+ HF L +PPNL+ ++ + + KPDL++YVFLR + N+ + ++ + D +
Sbjct: 137 TETHFKNVALKHMPPNLQKVDLMRAVPKPDLDSYVFLRVKERQENILVEPEADEQRDYVI 196
Query: 199 -LDEGSQHILPYESIAEFVKNNDVQLL 224
L+EGSQH++ Y++IA V + VQL+
Sbjct: 197 DLEEGSQHLIRYKTIAPLVASGAVQLI 223
>UNIPROTKB|Q499W2 [details] [associations]
symbol:Gins4 "DNA replication complex GINS protein SLD5"
species:10116 "Rattus norvegicus" [GO:0006260 "DNA replication"
evidence=IEA] RGD:1307397 GO:GO:0005634 GO:GO:0005737 GO:GO:0006260
InterPro:IPR021151 Pfam:PF05916 CTD:84296 eggNOG:COG5086
HOGENOM:HOG000215319 HOVERGEN:HBG059490 KO:K10735 OrthoDB:EOG4RFKTG
InterPro:IPR008591 PANTHER:PTHR21206 PIRSF:PIRSF007764
EMBL:BC099741 IPI:IPI00189899 RefSeq:NP_001025198.1
UniGene:Rn.103411 ProteinModelPortal:Q499W2 SMR:Q499W2
STRING:Q499W2 PhosphoSite:Q499W2 PRIDE:Q499W2 GeneID:290842
KEGG:rno:290842 UCSC:RGD:1307397 InParanoid:Q499W2 NextBio:631749
Genevestigator:Q499W2 Uniprot:Q499W2
Length = 223
Score = 358 (131.1 bits), Expect = 8.5e-33, P = 8.5e-33
Identities = 72/207 (34%), Positives = 127/207 (61%)
Query: 21 DENCLSVQKVLETIKTAWKNEKLSPEILPNKVEYIDCMLEQIKQMEENIEKLRKDDXXXX 80
+E L+ +++E ++ AW NEK +PE+L +K E ++C++EQ++ MEEN+ + +K D
Sbjct: 17 EEVVLTPAELIERLEQAWMNEKFAPELLESKSEIVECVMEQLEHMEENLRRAKKGDLKVS 76
Query: 81 XXXXXXXXXXFVITSYLRVRIEKIEKFTLDIVQQDFER-SSDNMYLSHDELKYAKSYLKS 139
+V++SYLR R+ KIEKF I++++ R + + LS +E +AK Y+
Sbjct: 77 IHRMEMERIRYVLSSYLRCRLMKIEKFFPHILEKEKTRPAGEPSSLSPEEFVFAKEYMDH 136
Query: 140 IDNHFDKY-LNMLPPNLRTLEENKKLIKPDLNTYVFLRAGKDVANVYIRDMSENKEDEFV 198
+ HF L +PPNL+ ++ + + KPDL++YVFLR + N+ + ++ + D +
Sbjct: 137 TETHFKNVALKHMPPNLQKVDLMRAVPKPDLDSYVFLRVKERQENILVEPEADEQRDYVI 196
Query: 199 -LDEGSQHILPYESIAEFVKNNDVQLL 224
L+EGSQH++ Y++IA V + VQL+
Sbjct: 197 DLEEGSQHLIRYKTIAPLVASGAVQLI 223
>UNIPROTKB|F1SE31 [details] [associations]
symbol:GINS4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] GO:GO:0005634 GO:GO:0005737 InterPro:IPR021151
Pfam:PF05916 GeneTree:ENSGT00390000003246 KO:K10735 OMA:AFAKEYM
InterPro:IPR008591 PANTHER:PTHR21206 PIRSF:PIRSF007764
EMBL:CU606939 RefSeq:XP_003483924.1 Ensembl:ENSSSCT00000022257
GeneID:100738105 KEGG:ssc:100738105 Uniprot:F1SE31
Length = 223
Score = 357 (130.7 bits), Expect = 1.1e-32, P = 1.1e-32
Identities = 71/218 (32%), Positives = 131/218 (60%)
Query: 10 DIIETEPAANEDENCLSVQKVLETIKTAWKNEKLSPEILPNKVEYIDCMLEQIKQMEENI 69
D++ + + +E L+ ++++ ++ AW NEK +PE+L NK E ++C++EQ+ MEEN+
Sbjct: 6 DLLGQDSDGDSEEVVLTPAELIDRLEQAWMNEKFAPELLENKSEIVECVMEQLDHMEENL 65
Query: 70 EKLRKDDXXXXXXXXXXXXXXFVITSYLRVRIEKIEKFTLDIVQQDFER-SSDNMYLSHD 128
+ +K D FV++SYLR R+ KIEKF +++++ R + LS +
Sbjct: 66 RRAKKGDLKVSIHQMEMERIRFVLSSYLRCRLMKIEKFFPHVLEKEKTRPEGEPSSLSPE 125
Query: 129 ELKYAKSYLKSIDNHFDKY-LNMLPPNLRTLEENKKLIKPDLNTYVFLRAGKDVANVYIR 187
E +A+ Y+ + +N+ L +PPNL+ ++ + + KPDL++YVFLR + N+ +
Sbjct: 126 EFAFAQEYMVNTENYLKNVALKHMPPNLQKVDLLRAVPKPDLDSYVFLRVKERQENILVE 185
Query: 188 DMSENKEDEFV-LDEGSQHILPYESIAEFVKNNDVQLL 224
++ + D + L+EGSQH++ Y++IA V + VQL+
Sbjct: 186 PETDEQRDYVIDLEEGSQHLIRYKTIAPLVASGAVQLI 223
>MGI|MGI:1923847 [details] [associations]
symbol:Gins4 "GINS complex subunit 4 (Sld5 homolog)"
species:10090 "Mus musculus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0006260 "DNA replication"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
MGI:MGI:1923847 GO:GO:0005634 GO:GO:0005737 GO:GO:0006260
InterPro:IPR021151 Pfam:PF05916 CTD:84296 eggNOG:COG5086
GeneTree:ENSGT00390000003246 HOGENOM:HOG000215319
HOVERGEN:HBG059490 KO:K10735 OMA:AFAKEYM OrthoDB:EOG4RFKTG
InterPro:IPR008591 PANTHER:PTHR21206 PIRSF:PIRSF007764
EMBL:AK076104 EMBL:AK164815 EMBL:BC002156 IPI:IPI00117317
RefSeq:NP_077202.1 UniGene:Mm.27945 ProteinModelPortal:Q99LZ3
SMR:Q99LZ3 STRING:Q99LZ3 PhosphoSite:Q99LZ3 PaxDb:Q99LZ3
PRIDE:Q99LZ3 DNASU:109145 Ensembl:ENSMUST00000033950 GeneID:109145
KEGG:mmu:109145 UCSC:uc009ler.2 InParanoid:Q99LZ3 NextBio:361692
Bgee:Q99LZ3 Genevestigator:Q99LZ3 Uniprot:Q99LZ3
Length = 223
Score = 357 (130.7 bits), Expect = 1.1e-32, P = 1.1e-32
Identities = 73/220 (33%), Positives = 130/220 (59%)
Query: 8 LFDIIETEPAANEDENCLSVQKVLETIKTAWKNEKLSPEILPNKVEYIDCMLEQIKQMEE 67
+ D+ + +E L+ +++E ++ AW NEK +PE+L +K E ++C++EQ++ MEE
Sbjct: 4 VLDLHGQDSDGGSEEMVLTPAELIEKLEQAWMNEKFAPELLESKAEIVECVMEQLEHMEE 63
Query: 68 NIEKLRKDDXXXXXXXXXXXXXXFVITSYLRVRIEKIEKFTLDIVQQDFERSS-DNMYLS 126
N+ + +K D +V++SYLR R+ KIEKF I++++ RS + LS
Sbjct: 64 NLRRAKKGDLKVSIHRMEMERIRYVLSSYLRCRLMKIEKFFPHILEKEKVRSEGEPSSLS 123
Query: 127 HDELKYAKSYLKSIDNHFDKY-LNMLPPNLRTLEENKKLIKPDLNTYVFLRAGKDVANVY 185
+E +AK Y+ + HF L +PPNL+ ++ + + KPDL++YVFLR + N+
Sbjct: 124 PEEFVFAKEYMDHTETHFKNVALKHMPPNLQKVDLLRAVPKPDLDSYVFLRVKERQENIL 183
Query: 186 IRDMSENKEDEFV-LDEGSQHILPYESIAEFVKNNDVQLL 224
+ ++ + D + L+ GSQH++ Y++IA V + VQL+
Sbjct: 184 VEPEADEQRDYVIDLEVGSQHLIRYKTIAPLVASGAVQLI 223
>UNIPROTKB|F6X4M2 [details] [associations]
symbol:GINS4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006260 "DNA replication" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] GO:GO:0005634 GO:GO:0006260
InterPro:IPR021151 Pfam:PF05916 CTD:84296
GeneTree:ENSGT00390000003246 KO:K10735 OMA:AFAKEYM
InterPro:IPR008591 PANTHER:PTHR21206 PIRSF:PIRSF007764
Ensembl:ENSCAFT00000009232 EMBL:AAEX03010380 RefSeq:XP_539958.3
GeneID:482843 KEGG:cfa:482843 Uniprot:F6X4M2
Length = 223
Score = 354 (129.7 bits), Expect = 2.3e-32, P = 2.3e-32
Identities = 72/210 (34%), Positives = 128/210 (60%)
Query: 18 ANEDENCLSVQKVLETIKTAWKNEKLSPEILPNKVEYIDCMLEQIKQMEENIEKLRKDDX 77
A+ +E L+ +++E ++ AW NEK +PE+L +K E ++C++EQ+ MEEN+ + +K D
Sbjct: 14 ADSEEVVLTPAELIEKLEQAWMNEKFAPELLESKSEIVECVMEQLDHMEENLRRAKKGDL 73
Query: 78 XXXXXXXXXXXXXFVITSYLRVRIEKIEKFTLDIVQQD-FERSSDNMYLSHDELKYAKSY 136
+V++SYLR R+ KIEKF I++++ R + LS +EL +AK Y
Sbjct: 74 KVSIHRMEMERIRYVLSSYLRCRLMKIEKFFPHILEKEKTPREGELSSLSPEELIFAKQY 133
Query: 137 LKSIDNHFDKY-LNMLPPNLRTLEENKKLIKPDLNTYVFLRAGKDVANVYIRDMSENKED 195
+ + + + L +PPNL+ ++ + + KPDL++YVFLR + N+ + ++ + D
Sbjct: 134 MANTETYLKNVALKHMPPNLQVVDLLRSVPKPDLDSYVFLRVKERQENILVEPETDEQRD 193
Query: 196 EFV-LDEGSQHILPYESIAEFVKNNDVQLL 224
+ L+EGSQH++ Y++IA V + VQL+
Sbjct: 194 YVIDLEEGSQHLIRYKTIAPLVASGAVQLI 223
>ZFIN|ZDB-GENE-040801-59 [details] [associations]
symbol:zgc:100817 "zgc:100817" species:7955 "Danio
rerio" [GO:0003674 "molecular_function" evidence=ND] [GO:0006260
"DNA replication" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
ZFIN:ZDB-GENE-040801-59 GO:GO:0005634 GO:GO:0006260
InterPro:IPR021151 Pfam:PF05916 GeneTree:ENSGT00390000003246
InterPro:IPR008591 PANTHER:PTHR21206 PIRSF:PIRSF007764
EMBL:CABZ01070468 IPI:IPI00915674 Ensembl:ENSDART00000021604
ArrayExpress:F1QJF7 Bgee:F1QJF7 Uniprot:F1QJF7
Length = 224
Score = 350 (128.3 bits), Expect = 6.0e-32, P = 6.0e-32
Identities = 71/208 (34%), Positives = 128/208 (61%)
Query: 21 DENCLSVQKVLETIKTAWKNEKLSPEILPNKVEYIDCMLEQIKQMEENIEKLRKDDXXXX 80
+E ++ +++ ++ AW NEK SPE+L NK E ++C++EQ+ MEEN++++RK D
Sbjct: 17 EEELMTPAELISRLEEAWLNEKFSPELLENKSELVECVMEQLTHMEENLQRVRKGDLKAS 76
Query: 81 XXXXXXXXXXFVITSYLRVRIEKIEKFTLDIVQQDFERSS-DNMYLSHDELKYAKSYLKS 139
FV++S+LR R++KIEKF +++++ R+ D +LS +E +AK YL +
Sbjct: 77 VHRMEIDRIRFVLSSFLRSRLKKIEKFFPHVLEKEKSRADGDPSFLSPEEFAFAKEYLAN 136
Query: 140 IDNHFDKY-LNMLPPNLRTLEENKKLI-KPDLNTYVFLRAGKDVANVYIRDMSENKEDEF 197
+ + L +PPNL++++ K + +P L+++VFLR + N+ + ++ + +
Sbjct: 137 TEVYLRAVALKHMPPNLQSVDMMKAAVPEPCLDSFVFLRVKEKQENILVEPETDEQREYV 196
Query: 198 V-LDEGSQHILPYESIAEFVKNNDVQLL 224
V LDEGSQH++ Y +IA V + VQL+
Sbjct: 197 VDLDEGSQHLMRYRTIAPLVASGAVQLI 224
>UNIPROTKB|E2R2C7 [details] [associations]
symbol:GINS4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] GO:GO:0005634 GO:GO:0005737
InterPro:IPR021151 Pfam:PF05916 InterPro:IPR008591
PANTHER:PTHR21206 PIRSF:PIRSF007764 Ensembl:ENSCAFT00000009232
Uniprot:E2R2C7
Length = 224
Score = 349 (127.9 bits), Expect = 7.7e-32, P = 7.7e-32
Identities = 72/211 (34%), Positives = 128/211 (60%)
Query: 18 ANEDENCLSVQKVLETIKTAWKNEKLSPEILPNKVEYIDCMLEQIKQMEENIEKLRKDDX 77
A+ +E L+ +++E ++ AW NEK +PE+L +K E ++C++EQ+ MEEN+ + +K D
Sbjct: 14 ADSEEVVLTPAELIEKLEQAWMNEKFAPELLESKSEIVECVMEQLDHMEENLRRAKKGDL 73
Query: 78 XXXXXXXXXXXXXFVITSYLRVRIEKIEKFTLDIVQQD-FERSSDNMYLSHDELKYAKSY 136
+V++SYLR R+ KIEKF I++++ R + LS +EL +AK Y
Sbjct: 74 KVSIHRMEMERIRYVLSSYLRCRLMKIEKFFPHILEKEKTPREGELSSLSPEELIFAKQY 133
Query: 137 LKSIDNHFDKY-LNMLPPNLRTLEENKKLI-KPDLNTYVFLRAGKDVANVYIRDMSENKE 194
+ + + + L +PPNL+ ++ + + KPDL++YVFLR + N+ + ++ +
Sbjct: 134 MANTETYLKNVALKHMPPNLQVVDLLRSAVPKPDLDSYVFLRVKERQENILVEPETDEQR 193
Query: 195 DEFV-LDEGSQHILPYESIAEFVKNNDVQLL 224
D + L+EGSQH++ Y++IA V + VQL+
Sbjct: 194 DYVIDLEEGSQHLIRYKTIAPLVASGAVQLI 224
>UNIPROTKB|Q9BRT9 [details] [associations]
symbol:GINS4 "DNA replication complex GINS protein SLD5"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0000084 "S phase of mitotic cell cycle" evidence=TAS]
[GO:0000278 "mitotic cell cycle" evidence=TAS] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0006271 "DNA strand elongation
involved in DNA replication" evidence=TAS] GO:GO:0005737
Reactome:REACT_115566 GO:GO:0005654 EMBL:CH471080 GO:GO:0000084
Reactome:REACT_383 GO:GO:0006271 InterPro:IPR021151 Pfam:PF05916
PDB:2E9X PDB:2EHO PDB:2Q9Q PDBsum:2E9X PDBsum:2EHO PDBsum:2Q9Q
CTD:84296 eggNOG:COG5086 HOGENOM:HOG000215319 HOVERGEN:HBG059490
KO:K10735 OMA:AFAKEYM OrthoDB:EOG4RFKTG InterPro:IPR008591
PANTHER:PTHR21206 PIRSF:PIRSF007764 EMBL:AK095334 EMBL:AK313373
EMBL:BC005995 EMBL:BC027454 IPI:IPI00031614 IPI:IPI00792990
RefSeq:NP_115712.1 UniGene:Hs.656996 ProteinModelPortal:Q9BRT9
SMR:Q9BRT9 DIP:DIP-29334N IntAct:Q9BRT9 MINT:MINT-1469672
STRING:Q9BRT9 PhosphoSite:Q9BRT9 DMDM:74732928 PaxDb:Q9BRT9
PeptideAtlas:Q9BRT9 PRIDE:Q9BRT9 Ensembl:ENST00000276533
Ensembl:ENST00000518671 Ensembl:ENST00000520710 GeneID:84296
KEGG:hsa:84296 UCSC:uc003xnx.3 GeneCards:GC08P041388
HGNC:HGNC:28226 HPA:HPA024663 HPA:HPA026580 MIM:610611
neXtProt:NX_Q9BRT9 PharmGKB:PA145008337 InParanoid:Q9BRT9
PhylomeDB:Q9BRT9 EvolutionaryTrace:Q9BRT9 GenomeRNAi:84296
NextBio:73952 ArrayExpress:Q9BRT9 Bgee:Q9BRT9 CleanEx:HS_GINS4
Genevestigator:Q9BRT9 Uniprot:Q9BRT9
Length = 223
Score = 343 (125.8 bits), Expect = 3.3e-31, P = 3.3e-31
Identities = 67/218 (30%), Positives = 132/218 (60%)
Query: 10 DIIETEPAANEDENCLSVQKVLETIKTAWKNEKLSPEILPNKVEYIDCMLEQIKQMEENI 69
D + + +E L+ +++E ++ AW NEK +PE+L +K E ++C++EQ++ MEEN+
Sbjct: 6 DFLGQDSDGGSEEVVLTPAELIERLEQAWMNEKFAPELLESKPEIVECVMEQLEHMEENL 65
Query: 70 EKLRKDDXXXXXXXXXXXXXXFVITSYLRVRIEKIEKFTLDIVQQDFER-SSDNMYLSHD 128
+ +++D +V++SYLR R+ KIEKF +++++ R + LS +
Sbjct: 66 RRAKREDLKVSIHQMEMERIRYVLSSYLRCRLMKIEKFFPHVLEKEKTRPEGEPSSLSPE 125
Query: 129 ELKYAKSYLKSIDNHFDKY-LNMLPPNLRTLEENKKLIKPDLNTYVFLRAGKDVANVYIR 187
EL +A+ ++ + +++ L +PPNL+ ++ + + KPDL++YVFLR + N+ +
Sbjct: 126 ELAFAREFMANTESYLKNVALKHMPPNLQKVDLFRAVPKPDLDSYVFLRVRERQENILVE 185
Query: 188 DMSENKEDEFV-LDEGSQHILPYESIAEFVKNNDVQLL 224
++ + D + L++GSQH++ Y++IA V + VQL+
Sbjct: 186 PDTDEQRDYVIDLEKGSQHLIRYKTIAPLVASGAVQLI 223
>UNIPROTKB|Q7ZT48 [details] [associations]
symbol:gins4 "Sld5" species:8355 "Xenopus laevis"
[GO:0000811 "GINS complex" evidence=IPI] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0006260 "DNA replication" evidence=IMP] GO:GO:0006260
GO:GO:0003682 InterPro:IPR021151 Pfam:PF05916 GO:GO:0000811
CTD:84296 HOVERGEN:HBG059490 KO:K10735 InterPro:IPR008591
PANTHER:PTHR21206 PIRSF:PIRSF007764 EMBL:BC068670 EMBL:AB097167
RefSeq:NP_001084702.1 UniGene:Xl.1783 SMR:Q7ZT48 GeneID:414663
KEGG:xla:414663 Xenbase:XB-GENE-949843 Uniprot:Q7ZT48
Length = 221
Score = 327 (120.2 bits), Expect = 1.6e-29, P = 1.6e-29
Identities = 66/215 (30%), Positives = 129/215 (60%)
Query: 14 TEPAANEDENCLSVQKVLETIKTAWKNEKLSPEILPNKVEYIDCMLEQIKQMEENIEKLR 73
++ ++EDE L+ +++ ++ AW NEK +PE+L +K E ++C++EQ+ ME+N+ + +
Sbjct: 8 SDQGSDEDEEVLTPAELINKLEEAWLNEKFAPELLESKSEVVECVMEQLNHMEQNLHRAK 67
Query: 74 KDDXXXXXXXXXXXXXXFVITSYLRVRIEKIEKFTLDIVQQDFERSS-DNMYLSHDELKY 132
D ++++SYLR R+ KIEKF I++++ R + +LS +E +
Sbjct: 68 PGDLKISFHHMEIERIRYMLSSYLRSRMLKIEKFFPHILEKEKSRGEGEPPHLSPEEFAF 127
Query: 133 AKSYLKSIDNHFDKY-LNMLPPNLRTLEENKKLIKPDLNTYVFLRAGKDVANVYIRDMSE 191
AK Y+ + + L +PPNL+T++ K + KP+L+++VFLR ++ N+ + ++
Sbjct: 128 AKEYMTNTETLLKSVALRHMPPNLQTVDLLKSVPKPNLDSFVFLRVKEEQNNILVEPETD 187
Query: 192 NKEDEFVLDE--GSQHILPYESIAEFVKNNDVQLL 224
++ E+ +D GSQH++ Y +IA V + V+L+
Sbjct: 188 -EQSEYAIDMEVGSQHLIRYRTIAPLVASGAVKLI 221
>UNIPROTKB|E5RFF9 [details] [associations]
symbol:GINS4 "DNA replication complex GINS protein SLD5"
species:9606 "Homo sapiens" [GO:0006260 "DNA replication"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] GO:GO:0005634 GO:GO:0005737 GO:GO:0006260
InterPro:IPR021151 Pfam:PF05916 InterPro:IPR008591
PANTHER:PTHR21206 PIRSF:PIRSF007764 HGNC:HGNC:28226 EMBL:AC009630
IPI:IPI00983045 ProteinModelPortal:E5RFF9 SMR:E5RFF9
Ensembl:ENST00000523277 ArrayExpress:E5RFF9 Bgee:E5RFF9
Uniprot:E5RFF9
Length = 192
Score = 284 (105.0 bits), Expect = 5.9e-25, P = 5.9e-25
Identities = 56/187 (29%), Positives = 110/187 (58%)
Query: 10 DIIETEPAANEDENCLSVQKVLETIKTAWKNEKLSPEILPNKVEYIDCMLEQIKQMEENI 69
D + + +E L+ +++E ++ AW NEK +PE+L +K E ++C++EQ++ MEEN+
Sbjct: 6 DFLGQDSDGGSEEVVLTPAELIERLEQAWMNEKFAPELLESKPEIVECVMEQLEHMEENL 65
Query: 70 EKLRKDDXXXXXXXXXXXXXXFVITSYLRVRIEKIEKFTLDIVQQDFER-SSDNMYLSHD 128
+ +++D +V++SYLR R+ KIEKF +++++ R + LS +
Sbjct: 66 RRAKREDLKVSIHQMEMERIRYVLSSYLRCRLMKIEKFFPHVLEKEKTRPEGEPSSLSPE 125
Query: 129 ELKYAKSYLKSIDNHFDKY-LNMLPPNLRTLEENKKLIKPDLNTYVFLRAGKDVANVYIR 187
EL +A+ ++ + +++ L +PPNL+ ++ + + KPDL++YVFLR + N+ +
Sbjct: 126 ELAFAREFMANTESYLKNVALKHMPPNLQKVDLFRAVPKPDLDSYVFLRVRERQENILVE 185
Query: 188 -DMSENK 193
D E +
Sbjct: 186 PDTDEQR 192
>WB|WBGene00013768 [details] [associations]
symbol:Y113G7B.24c species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0005634 "nucleus" evidence=IDA] GO:GO:0005634
GO:GO:0009792 EMBL:AL110477 eggNOG:COG5086
GeneTree:ENSGT00390000003246 HOGENOM:HOG000215319 KO:K10735
InterPro:IPR008591 PANTHER:PTHR21206 PIRSF:PIRSF007764
GeneID:190979 KEGG:cel:CELE_Y113G7B.24 CTD:190979 PIR:T26448
RefSeq:NP_001256903.1 ProteinModelPortal:Q9U2W9 SMR:Q9U2W9
IntAct:Q9U2W9 STRING:Q9U2W9 PaxDb:Q9U2W9 EnsemblMetazoa:Y113G7B.24a
UCSC:Y113G7B.24 WormBase:Y113G7B.24a InParanoid:Q9U2W9 OMA:CHLIPFE
NextBio:947558 ArrayExpress:Q9U2W9 Uniprot:Q9U2W9
Length = 224
Score = 229 (85.7 bits), Expect = 4.0e-19, P = 4.0e-19
Identities = 60/211 (28%), Positives = 108/211 (51%)
Query: 19 NEDENCLSVQKVLETIKTAWKNEKLSPEILPNKVEYIDCMLEQIKQMEENIEKLR-KDDX 77
+E + + ++VL + W+NE +P +LP ++E ++ +L+QI+ MEENI K K
Sbjct: 16 DEYDEMTTPEEVLRKMTATWQNELCAPCLLPTQMELVEILLDQIQGMEENIGKQTDKMQL 75
Query: 78 XXXXXXXXXXXXXFVITSYLRVRIEKIEKFTLDIVQQDFERSSDNM--YLSHDELKYAKS 135
F+ + Y+R R++KIE D + Q +R + LS E+K+A+
Sbjct: 76 RISVHRVELQRIGFITSDYVRCRLQKIESNPHDAIDQHKKRKEEGKSDLLSESEMKFAEE 135
Query: 136 YLKSIDNHFDK-YLNMLPPNLRTLEENKKLIKPDLNTYVFLRAGKDVANVYIRDMSE-NK 193
Y + N F K L +P L+ + + D+ Y + + DV NV I D + N
Sbjct: 136 YALAESNLFQKTVLEFMPAALKKMPVPRG-DHDDVMVYAKVTSD-DVGNVAIPDWQDLNG 193
Query: 194 EDEFVLDEGSQHILPYESIAEFVKNNDVQLL 224
E ++ S H++P+ES+ + V++ ++QL+
Sbjct: 194 EVILEMEPESCHLIPFESVHQLVEDGNIQLM 224
>TAIR|locus:2154329 [details] [associations]
symbol:SLD5 "AT5G49010" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0000811 "GINS complex" evidence=ISS]
[GO:0006270 "DNA replication initiation" evidence=RCA;TAS]
[GO:0006261 "DNA-dependent DNA replication" evidence=RCA]
[GO:0006275 "regulation of DNA replication" evidence=RCA]
[GO:0051726 "regulation of cell cycle" evidence=RCA] EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0006270 InterPro:IPR021151
Pfam:PF05916 GO:GO:0000811 HOGENOM:HOG000215319 KO:K10735
InterPro:IPR008591 PANTHER:PTHR21206 PIRSF:PIRSF007764 OMA:MDPKTNF
EMBL:BT010406 EMBL:AK221044 IPI:IPI00516710 RefSeq:NP_199712.2
UniGene:At.29811 ProteinModelPortal:Q6NQP5 IntAct:Q6NQP5
STRING:Q6NQP5 PRIDE:Q6NQP5 EnsemblPlants:AT5G49010.1 GeneID:834960
KEGG:ath:AT5G49010 TAIR:At5g49010 InParanoid:Q6NQP5
PhylomeDB:Q6NQP5 ProtClustDB:CLSN2918371 Genevestigator:Q6NQP5
Uniprot:Q6NQP5
Length = 220
Score = 184 (69.8 bits), Expect = 2.3e-14, P = 2.3e-14
Identities = 62/225 (27%), Positives = 107/225 (47%)
Query: 14 TEPAANEDENCLSVQKVLETIKTAWKNEKLSPEILPNKVEYIDCMLEQIKQMEENIEKLR 73
+E + D L +E +K AW+NEK +PEIL + +D EQI+ +EE IE
Sbjct: 5 SEAGGSADYETLMSTSDVELLKRAWRNEKAAPEILQYEGALVDRAKEQIELVEETIEDYV 64
Query: 74 K---DDXXXXXXXXXXXXXXFVITSYLRVRIEKIEKFTL-DIVQQDFERSSDNMYLSHDE 129
+ D F++ SYLRVR+ KIEKF ++ ++ ER LS E
Sbjct: 65 ENGIDPLVVSLYQMDLDRAQFLLRSYLRVRLLKIEKFMFHNLNSEEAERR-----LSEQE 119
Query: 130 LKYAKSYLKSIDNHFDK-YLNMLPPNLRTL-------EENKKLIKPDLNTYVFLRAGKDV 181
+A + HF++ L LP N +++ E + + +P L+T+V R+ V
Sbjct: 120 KVFATRCADDLAKHFEETVLLKLPENYQSVLKQSLISEVDDMVPQPHLDTFVVCRSKNFV 179
Query: 182 A-NVYIRDMSENKEDEFV-LDEGSQHILPYESIAEFVKNNDVQLL 224
+ N+Y E + E V ++ G + + Y+ + +++ + L+
Sbjct: 180 SLNLY----EEGESPETVEMERGDLYFIRYKIVKRAIESGQIDLI 220
>POMBASE|SPBP4H10.21c [details] [associations]
symbol:sld5 "GINS complex subunit Sld5" species:4896
"Schizosaccharomyces pombe" [GO:0000811 "GINS complex"
evidence=ISS] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006270 "DNA replication initiation" evidence=IC]
[GO:0031261 "DNA replication preinitiation complex" evidence=IC]
[GO:0034613 "cellular protein localization" evidence=IMP]
PomBase:SPBP4H10.21c GO:GO:0005829 GO:GO:0007059 GO:GO:0034613
EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0006270
InterPro:IPR021151 Pfam:PF05916 GO:GO:0000811 eggNOG:COG5086
HOGENOM:HOG000215319 KO:K10735 InterPro:IPR008591 PANTHER:PTHR21206
PIRSF:PIRSF007764 RefSeq:NP_596195.1 ProteinModelPortal:Q9P7C8
STRING:Q9P7C8 EnsemblFungi:SPBP4H10.21c.1 GeneID:2541368
KEGG:spo:SPBP4H10.21c OMA:MDPKTNF OrthoDB:EOG4QG0PM
NextBio:20802477 Uniprot:Q9P7C8
Length = 214
Score = 182 (69.1 bits), Expect = 3.8e-14, P = 3.8e-14
Identities = 55/215 (25%), Positives = 102/215 (47%)
Query: 22 ENCLSVQKVLETIKTAWKNEKLSPEILPNKVEYIDCMLEQIKQMEENIEKLRKDDXXXXX 81
E V+ E + T W NE+++P++LP E + +L++I+ E ++
Sbjct: 11 EPTTEVENDYEDLCTQWVNERMAPDLLPFAEEIVSRVLDRIEAQRETLQLAIGTSSATSY 70
Query: 82 XXXXXXXXX----FVITSYLRVRIEKIEKFTLDIVQQDFERSSDNM--YLSHDELKYAKS 135
FV+ SY+R RI KI+K+ + +S N+ YLS E +Y
Sbjct: 71 RSVLMQTELERVKFVLRSYMRTRINKIDKYA------QYIQSHPNLLLYLSSPERQYLLR 124
Query: 136 YLKSIDNHF-DKYLNMLPPNLRTLEE---NKKLI-KPDLNTYVFLRAGKDVANVYIRDMS 190
+ + + H+ D +L +P + L++ N ++ PD++T VF V N + +
Sbjct: 125 HQQIVHRHYMDSFLREVPAKMNKLDDKVGNLSMVASPDMDTAVFC-----VVNESVEENF 179
Query: 191 ENKEDEFV-LDEGSQHILPYESIAEFVKNNDVQLL 224
E+E++ LD+G IL Y I+++++ V L+
Sbjct: 180 RVSENEYITLDKGDVLILRYSVISDYLRLGVVSLI 214
>DICTYBASE|DDB_G0269324 [details] [associations]
symbol:gins4 "GINS complex subunit 4" species:44689
"Dictyostelium discoideum" [GO:0043138 "3'-5' DNA helicase
activity" evidence=ISS] [GO:0006260 "DNA replication"
evidence=IEA;ISS] [GO:0000811 "GINS complex" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA] dictyBase:DDB_G0269324
EMBL:AAFI02000005 GenomeReviews:CM000150_GR GO:GO:0006260
GO:GO:0000811 eggNOG:COG5086 KO:K10735 OMA:AFAKEYM
InterPro:IPR008591 PANTHER:PTHR21206 PIRSF:PIRSF007764
RefSeq:XP_645879.2 ProteinModelPortal:Q55EA2 STRING:Q55EA2
EnsemblProtists:DDB0266356 GeneID:8616819 KEGG:ddi:DDB_G0269324
ProtClustDB:CLSZ2445166 Uniprot:Q55EA2
Length = 211
Score = 158 (60.7 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 51/202 (25%), Positives = 95/202 (47%)
Query: 30 VLETIKTAWKNEKLSPEILPNKVEYIDCMLEQIKQMEENIEKLRKD---DXXXXXXXXXX 86
+L+ +K AW NEK +P +L + I ++E+I++ E +
Sbjct: 19 LLDKLKKAWINEKYAPNLLNYEDVIIKEVMEKIEEKESLCASAISNINLQFTANIYEMEI 78
Query: 87 XXXXFVITSYLRVRIEKIEKFTLDIVQQDFERSSDNMY--LSHDELKYAKSYLKSIDNHF 144
++I YL RI+KI+KF I+ + E + Y LS E+ Y + Y +D +F
Sbjct: 79 ERLKYIIKCYLVQRIKKIDKFYSSILLE-IENDEYDSYKLLSEFEINYCQKYKALMDGYF 137
Query: 145 -DKYLNMLPPNLRTLEENKKLIKPDLNTYVFLRAGKDVANVYIRDMSENKEDEFV-LDEG 202
+ LN +P + + ++ N + +P LNT+VF + +D+ + + +DE + +
Sbjct: 138 KNTLLNSIPKDFQKMDSNS-INRPFLNTFVFCKPREDLGDFLV-------DDETIDFKKT 189
Query: 203 SQHILPYESIAEFVKNNDVQLL 224
S + L Y I V+ + L+
Sbjct: 190 SIYFLKYLPIKSLVEGGKMDLI 211
>UNIPROTKB|G4MTZ4 [details] [associations]
symbol:MGG_01611 "DNA replication complex GINS protein
SLD5" species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] GO:GO:0005634 GO:GO:0006260
EMBL:CM001232 InterPro:IPR021151 Pfam:PF05916 KO:K10735
InterPro:IPR008591 PANTHER:PTHR21206 PIRSF:PIRSF007764
RefSeq:XP_003714595.1 ProteinModelPortal:G4MTZ4
EnsemblFungi:MGG_01611T0 GeneID:2679312 KEGG:mgr:MGG_01611
Uniprot:G4MTZ4
Length = 221
Score = 151 (58.2 bits), Expect = 1.8e-10, P = 1.8e-10
Identities = 60/228 (26%), Positives = 105/228 (46%)
Query: 10 DII-ETEPAANEDENCL-SVQKVLETIKTAWKNEKLSPEILPNKVEYI-DCMLEQIKQME 66
DI+ E +P D + L S ++ L+ + AW E+ +PE+L + + + + ++IKQ
Sbjct: 5 DILREVDP----DFDALPSERRDLQLLTRAWVAERSAPELLEWPSDGLFERVNDRIKQQI 60
Query: 67 ENIEKLR-----KDDXXXXXXXXXXXXXXFVITSYLRVRIEKIEKFTLDIVQQDFERSSD 121
E++E + K + F++ SYLR R+ KI+K TL + RS
Sbjct: 61 EHVEDMTGNMDPKTNFALIVIQTELERYKFLVRSYLRARMAKIDKHTLHYLSTPSLRSR- 119
Query: 122 NMYLSHDELKYAKSYLKSIDNHF-DKYLNMLPPNLRTLEE---NKKLIK-PDLNTYVFLR 176
LS EL YA + + NH+ +L PP L+ L + N +I PDL++ VF+R
Sbjct: 120 ---LSGTELAYATRHQALLHNHYLSSFLASFPPALQNLNDTAGNISMIDTPDLDSAVFIR 176
Query: 177 AGKDVANVYIRDMSENKEDEFVLDEGSQHILPYESIAEFVKNNDVQLL 224
+D ++ + + +G IL + V + +L+
Sbjct: 177 LLRDA---FVEGKGTDSDGAMEGRDGDILILRWSDAKHLVDEGNAELV 221
>SGD|S000002897 [details] [associations]
symbol:SLD5 "Subunit of the GINS complex" species:4932
"Saccharomyces cerevisiae" [GO:0031261 "DNA replication
preinitiation complex" evidence=IGI;IMP] [GO:0005634 "nucleus"
evidence=IEA] [GO:0031298 "replication fork protection complex"
evidence=IDA] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0000727 "double-strand break repair via break-induced
replication" evidence=IMP] [GO:0000811 "GINS complex" evidence=IPI]
[GO:0003674 "molecular_function" evidence=ND] [GO:0006261
"DNA-dependent DNA replication" evidence=IMP] SGD:S000002897
EMBL:BK006938 GO:GO:0006261 GO:GO:0031298 GO:GO:0000727 EMBL:U33050
InterPro:IPR021151 Pfam:PF05916 GO:GO:0000811 RefSeq:NP_010782.4
GeneID:852105 KEGG:sce:YDR494W eggNOG:COG5086
GeneTree:ENSGT00390000003246 HOGENOM:HOG000215319 KO:K10735
InterPro:IPR008591 PANTHER:PTHR21206 PIRSF:PIRSF007764
OrthoDB:EOG4QG0PM EMBL:AY558492 PIR:S69656 RefSeq:NP_010777.3
ProteinModelPortal:Q03406 SMR:Q03406 DIP:DIP-1813N IntAct:Q03406
MINT:MINT-409410 STRING:Q03406 PaxDb:Q03406 EnsemblFungi:YDR489W
GeneID:852100 KEGG:sce:YDR489W CYGD:YDR489w OMA:MIDEPDW
NextBio:970445 Genevestigator:Q03406 GermOnline:YDR489W
Uniprot:Q03406
Length = 294
Score = 107 (42.7 bits), Expect = 4.1e-08, Sum P(2) = 4.1e-08
Identities = 32/96 (33%), Positives = 55/96 (57%)
Query: 91 FVITSYLRVRIEKIEKFTLDIVQ-QDFERSSDNM--YLSHDELKYAKSY----LKSIDNH 143
FVI SY+R R+ KI+KF+L + Q + E S ++ LS DE+KY ++ LK +++
Sbjct: 138 FVIRSYIRCRLSKIDKFSLYLRQLNEDENSLISLTDLLSKDEIKYHDTHSLIWLKLVNDS 197
Query: 144 FDKYLNMLPPNLRTLEENKKLI----KPDLNTYVFL 175
KY+ P L+ + + + + +PD N +VF+
Sbjct: 198 ILKYM---PEELQAINDTEGSVNMIDEPDWNKFVFI 230
Score = 76 (31.8 bits), Expect = 4.1e-08, Sum P(2) = 4.1e-08
Identities = 15/48 (31%), Positives = 27/48 (56%)
Query: 25 LSVQKVLETIKTAWKNEKLSPEILPNKVEYIDCMLEQIKQMEENIEKL 72
+S Q+ + +WKNE+ SPE+LP + + +L +I + IE +
Sbjct: 54 VSPQQDFSDLMKSWKNERCSPELLPYPHQLMKRLLNRISMQSQLIENI 101
>CGD|CAL0000861 [details] [associations]
symbol:SLD5 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0031298 "replication fork
protection complex" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0000811 "GINS complex" evidence=IEA] [GO:0000727
"double-strand break repair via break-induced replication"
evidence=IEA] [GO:0006261 "DNA-dependent DNA replication"
evidence=IEA] [GO:0034613 "cellular protein localization"
evidence=IEA] CGD:CAL0000861 GO:GO:0005634 GO:GO:0006260
EMBL:AACQ01000032 InterPro:IPR021151 Pfam:PF05916 eggNOG:COG5086
HOGENOM:HOG000215319 KO:K10735 InterPro:IPR008591 PANTHER:PTHR21206
PIRSF:PIRSF007764 RefSeq:XP_719391.1 ProteinModelPortal:Q5ACL1
STRING:Q5ACL1 GeneID:3639041 KEGG:cal:CaO19.7631 Uniprot:Q5ACL1
Length = 236
Score = 126 (49.4 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 42/204 (20%), Positives = 90/204 (44%)
Query: 40 NEKLSPEILPNKVEYIDCMLEQIKQMEENI-EKLRKDDXXXXXXXXXXXXXX-------- 90
NE+++PE+LP K + + +L + ++ + E D
Sbjct: 38 NERMAPELLPYKQDLMSTVLTMMSNQQQYLLESHEYGDMNGDSGVLSGDFKLQLMIIETD 97
Query: 91 -----FVITSYLRVRIEKIEKFTLDIVQQDFERSSDNMYLSHDELKYAKSYLKSIDNHFD 145
+++ Y+R R+ K+ KFT+ + + + +DN+ LS +E Y Y + + ++
Sbjct: 98 LERLNYIVRLYIRTRLSKLNKFTIFYINESSQ--NDNL-LSKEERDYIHKYFQILTQLYN 154
Query: 146 K-YLNMLPPNLRTLEENK----KLIKPDLNTYVFLRAGKDVANVYIRDMSENKEDEFVLD 200
+L LP L L++ +++PDL+ VF++ +V + D E + L
Sbjct: 155 NCFLKKLPQMLTYLDDTSGGQSMIVEPDLDQPVFIKCTSEVP--ILLDYDGATEIDLELI 212
Query: 201 EGSQHILPYESIAEFVKNNDVQLL 224
+ +++ Y + ++ DV L+
Sbjct: 213 KKGVYVVKYSLVKRYIDIGDVVLI 236
>UNIPROTKB|Q5ACL1 [details] [associations]
symbol:SLD5 "Potential GINS DNA replication initiation
complex subunit" species:237561 "Candida albicans SC5314"
[GO:0003674 "molecular_function" evidence=ND] CGD:CAL0000861
GO:GO:0005634 GO:GO:0006260 EMBL:AACQ01000032 InterPro:IPR021151
Pfam:PF05916 eggNOG:COG5086 HOGENOM:HOG000215319 KO:K10735
InterPro:IPR008591 PANTHER:PTHR21206 PIRSF:PIRSF007764
RefSeq:XP_719391.1 ProteinModelPortal:Q5ACL1 STRING:Q5ACL1
GeneID:3639041 KEGG:cal:CaO19.7631 Uniprot:Q5ACL1
Length = 236
Score = 126 (49.4 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 42/204 (20%), Positives = 90/204 (44%)
Query: 40 NEKLSPEILPNKVEYIDCMLEQIKQMEENI-EKLRKDDXXXXXXXXXXXXXX-------- 90
NE+++PE+LP K + + +L + ++ + E D
Sbjct: 38 NERMAPELLPYKQDLMSTVLTMMSNQQQYLLESHEYGDMNGDSGVLSGDFKLQLMIIETD 97
Query: 91 -----FVITSYLRVRIEKIEKFTLDIVQQDFERSSDNMYLSHDELKYAKSYLKSIDNHFD 145
+++ Y+R R+ K+ KFT+ + + + +DN+ LS +E Y Y + + ++
Sbjct: 98 LERLNYIVRLYIRTRLSKLNKFTIFYINESSQ--NDNL-LSKEERDYIHKYFQILTQLYN 154
Query: 146 K-YLNMLPPNLRTLEENK----KLIKPDLNTYVFLRAGKDVANVYIRDMSENKEDEFVLD 200
+L LP L L++ +++PDL+ VF++ +V + D E + L
Sbjct: 155 NCFLKKLPQMLTYLDDTSGGQSMIVEPDLDQPVFIKCTSEVP--ILLDYDGATEIDLELI 212
Query: 201 EGSQHILPYESIAEFVKNNDVQLL 224
+ +++ Y + ++ DV L+
Sbjct: 213 KKGVYVVKYSLVKRYIDIGDVVLI 236
>ASPGD|ASPL0000016356 [details] [associations]
symbol:AN3940 species:162425 "Emericella nidulans"
[GO:0031298 "replication fork protection complex" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0000811 "GINS complex"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0000727 "double-strand break repair via break-induced
replication" evidence=IEA] [GO:0006261 "DNA-dependent DNA
replication" evidence=IEA] [GO:0034613 "cellular protein
localization" evidence=IEA] GO:GO:0005634 GO:GO:0006260
EMBL:BN001302 EMBL:AACD01000064 InterPro:IPR021151 Pfam:PF05916
HOGENOM:HOG000215319 KO:K10735 InterPro:IPR008591 PANTHER:PTHR21206
PIRSF:PIRSF007764 OrthoDB:EOG4QG0PM RefSeq:XP_661544.1
EnsemblFungi:CADANIAT00004754 GeneID:2873363 KEGG:ani:AN3940.2
eggNOG:NOG281864 OMA:MERMMER Uniprot:Q5B690
Length = 270
Score = 79 (32.9 bits), Expect = 0.00092, Sum P(2) = 0.00092
Identities = 29/110 (26%), Positives = 52/110 (47%)
Query: 125 LSHDELKYAKSYLKSIDNHF-DKYLNMLPPNLRTLEENK---KLIK-PDLNTYVFLRAGK 179
LS E + ++ + + HF +LN PP LR L++N +++ PD VF+R
Sbjct: 161 LSPSETTFLYTHQQLLAKHFGSSFLNSFPPQLRRLDDNAGGTSMVQGPDTREAVFVRCLA 220
Query: 180 D-VANVYIRDMSENKEDEFV----LDEGSQHILPYESIAEFVKNNDVQLL 224
D V + E + E V + G ++ +E++ E + DV++L
Sbjct: 221 DEVLLLAPPGPGEGDDGEEVYGGTMRMGDVWVVRWEAVKEAWERGDVEVL 270
Score = 66 (28.3 bits), Expect = 0.00092, Sum P(2) = 0.00092
Identities = 13/35 (37%), Positives = 21/35 (60%)
Query: 38 WKNEKLSPEILPNKVEYIDCMLEQIKQMEENIEKL 72
W E+ PE+LP ++ M+E+++Q E IE L
Sbjct: 32 WVAERSVPELLPWPARLMERMMERVRQQIETIEDL 66
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.315 0.134 0.370 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 224 210 0.00080 112 3 11 23 0.41 33
31 0.48 35
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 21
No. of states in DFA: 592 (63 KB)
Total size of DFA: 165 KB (2097 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 23.22u 0.08s 23.30t Elapsed: 00:00:02
Total cpu time: 23.22u 0.08s 23.30t Elapsed: 00:00:02
Start: Thu Aug 15 11:30:29 2013 End: Thu Aug 15 11:30:31 2013