BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>psy2469
MPKVISRSIVCSDTKDKEEYGEEKPLHIYYCVCGQMTLILDCAVEKLPLRRRDGARVIDG
PKHAHKLTCEPDEVFHLKRPEGIERQHRFKCKKCGLFLYYKHDPSSNIIFIVQGAVVKSS
GEMPKMDIYNQVAVAKPKKIMVTKHTKNMGKFSSVTVSTIDEEEDEIEAREIADSYANNA
RIIEKQLERKGMNKRKSDSTTLNTGETEVKKPVRGTLIDK

High Scoring Gene Products

Symbol, full name Information P value
C330007P06Rik
RIKEN cDNA C330007P06 gene
protein from Mus musculus 1.3e-59
zgc:103697 gene_product from Danio rerio 1.5e-58
CG16865 protein from Drosophila melanogaster 5.4e-55
AT5G63440 protein from Arabidopsis thaliana 1.2e-12

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  psy2469
        (220 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

MGI|MGI:1924894 - symbol:C330007P06Rik "RIKEN cDNA C33000...   611  1.3e-59   1
ZFIN|ZDB-GENE-040912-104 - symbol:zgc:103697 "zgc:103697"...   601  1.5e-58   1
FB|FBgn0028919 - symbol:CG16865 species:7227 "Drosophila ...   402  5.4e-55   2
TAIR|locus:2167361 - symbol:AT5G63440 "AT5G63440" species...   168  1.2e-12   1


>MGI|MGI:1924894 [details] [associations]
            symbol:C330007P06Rik "RIKEN cDNA C330007P06 gene"
            species:10090 "Mus musculus" [GO:0003674 "molecular_function"
            evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
            [GO:0008150 "biological_process" evidence=ND] MGI:MGI:1924894
            eggNOG:NOG271379 HOGENOM:HOG000007597 HOVERGEN:HBG067022
            OrthoDB:EOG4D26R0 EMBL:AK021190 EMBL:AK032304 EMBL:AK034943
            EMBL:AK035825 EMBL:AK036910 EMBL:AK044209 EMBL:AK141615
            EMBL:AL450399 EMBL:BC021479 EMBL:BC051144 IPI:IPI00108970
            IPI:IPI00123617 RefSeq:NP_084227.1 UniGene:Mm.290704
            ProteinModelPortal:Q8VDP2 PhosphoSite:Q8VDP2 PRIDE:Q8VDP2
            DNASU:77644 Ensembl:ENSMUST00000047486 Ensembl:ENSMUST00000115248
            Ensembl:ENSMUST00000115249 GeneID:77644 KEGG:mmu:77644
            UCSC:uc012hfv.1 GeneTree:ENSGT00390000002197 NextBio:347288
            Bgee:Q8VDP2 CleanEx:MM_C330007P06RIK Genevestigator:Q8VDP2
            Uniprot:Q8VDP2
        Length = 222

 Score = 611 (220.1 bits), Expect = 1.3e-59, P = 1.3e-59
 Identities = 126/223 (56%), Positives = 156/223 (69%)

Query:     1 MPKVISRSIVCSDTKDKEEYGE-EKPLHIYYCVCGQMTLILDCAVEKLPLRRRDGARVID 59
             MPKV+SRS+VCSDT+D+EEY + EKPLH+YYC+CGQM L+LDC +EKLP+R RD +RVID
Sbjct:     1 MPKVVSRSVVCSDTRDREEYDDGEKPLHVYYCLCGQMVLVLDCQLEKLPMRPRDRSRVID 60

Query:    60 GPKHAHKL-TCEPDEVFHLKRPEGIERQHRFKCKKCGLFLYYKHDP-SSNIIFIVQGAVV 117
               KHAHK    E +E  +L+RPEGIERQ+R KC KCGL L+Y+  P ++ + FIV GAVV
Sbjct:    61 AAKHAHKFCNTEDEETTYLRRPEGIERQYRKKCAKCGLPLFYQSQPKNAPVTFIVDGAVV 120

Query:   118 KSSGEMPKMDIYNQVAVAKPKKIMVTKHTKNMGKFSSVTVSTXXXXXXXXXXXXXXXSYA 177
             K      K +IY Q     PKK+M+TK TK+MGKFSSVTVST               SYA
Sbjct:   121 KFGQGFGKTNIYTQKQ-EPPKKVMMTKRTKDMGKFSSVTVSTIDEEEEEIEAREVADSYA 179

Query:   178 NNARIIEKQLERKGMNKRKSDSTTLNTGETEVKKP-VRGTLID 219
              NA++IEKQLERKGM+KR+         E E KK  ++GTLID
Sbjct:   180 QNAKVIEKQLERKGMSKRRLQELA----ELEAKKAKMKGTLID 218


>ZFIN|ZDB-GENE-040912-104 [details] [associations]
            symbol:zgc:103697 "zgc:103697" species:7955 "Danio
            rerio" [GO:0005575 "cellular_component" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0003674 "molecular_function"
            evidence=ND] ZFIN:ZDB-GENE-040912-104 EMBL:BC081515 IPI:IPI00513330
            RefSeq:NP_001004659.1 UniGene:Dr.125114 STRING:Q66I61 GeneID:447921
            KEGG:dre:447921 eggNOG:NOG271379 HOGENOM:HOG000007597
            HOVERGEN:HBG067022 InParanoid:Q66I61 OrthoDB:EOG4D26R0
            NextBio:20832441 ArrayExpress:Q66I61 Uniprot:Q66I61
        Length = 224

 Score = 601 (216.6 bits), Expect = 1.5e-58, P = 1.5e-58
 Identities = 126/225 (56%), Positives = 153/225 (68%)

Query:     1 MPKVISRSIVCSDTKDKEEYGE-EKPLHIYYCVCGQMTLILDCAVEKLPLRRRDGARVID 59
             MPKV+SRS+VCSDT+D+EEY + EKPLH+YYC+CGQM L+LDC +EKLP+R RD ARVID
Sbjct:     1 MPKVVSRSVVCSDTRDREEYDDGEKPLHVYYCLCGQMVLVLDCQIEKLPMRPRDKARVID 60

Query:    60 GPKHAHKL-TCEPDEVFHLKRPEGIERQHRFKCKKCGLFLYYKHD-PSSNIIFIVQGAVV 117
               KHAHK    E DE  +LKR EGIERQ+R KC KCGL L+Y+H   S+   FIV GA+V
Sbjct:    61 AAKHAHKFCNVEEDEAVYLKRSEGIERQYRKKCGKCGLLLFYQHQMKSTQTTFIVDGALV 120

Query:   118 KSSGEMPKMDIYNQVAVAKPKKI--MVTKHTKNMGKFSSVTVSTXXXXXXXXXXXXXXXS 175
             K         +Y+Q     PKK+  M+TK TK+MGKFSSVTVST               S
Sbjct:   121 KFGQGFGNTSVYSQKQET-PKKVRVMMTKRTKDMGKFSSVTVSTIDEEEEEIEAREVADS 179

Query:   176 YANNARIIEKQLERKGMNKRKSDSTTLNTGETEVKKP-VRGTLID 219
             YA NA++IEKQLERKGM+KR+         E E KK  ++GTLID
Sbjct:   180 YAQNAKVIEKQLERKGMSKRRLQEPA----ELEAKKAKMKGTLID 220


>FB|FBgn0028919 [details] [associations]
            symbol:CG16865 species:7227 "Drosophila melanogaster"
            [GO:0003674 "molecular_function" evidence=ND] [GO:0000398 "mRNA
            splicing, via spliceosome" evidence=IC] [GO:0071013 "catalytic step
            2 spliceosome" evidence=IDA] EMBL:AE014134 GO:GO:0000398
            GO:GO:0071013 eggNOG:NOG271379 GeneTree:ENSGT00390000002197
            EMBL:AY113531 RefSeq:NP_609677.1 UniGene:Dm.25405 IntAct:Q9V412
            MINT:MINT-866703 PaxDb:Q9V412 PRIDE:Q9V412
            EnsemblMetazoa:FBtr0080540 EnsemblMetazoa:FBtr0331626 GeneID:34788
            KEGG:dme:Dmel_CG16865 UCSC:CG16865-RA FlyBase:FBgn0028919
            InParanoid:Q9V412 OMA:QYRKKCG OrthoDB:EOG4VQ859 PhylomeDB:Q9V412
            GenomeRNAi:34788 NextBio:790226 Bgee:Q9V412 Uniprot:Q9V412
        Length = 247

 Score = 402 (146.6 bits), Expect = 5.4e-55, Sum P(2) = 5.4e-55
 Identities = 73/134 (54%), Positives = 99/134 (73%)

Query:     1 MPKVISRSIVCSDTKDKEEYGEEKPLHIYYCVCGQMTLILDCAVEKLPLRRRDGARVIDG 60
             MPKV+SRSIVCSDTKD+EEY EEKPL+IYYC+C +M LILDC +E+LPLR  D ARVI+ 
Sbjct:     1 MPKVVSRSIVCSDTKDQEEYNEEKPLNIYYCLCNKMALILDCTLEQLPLREVDNARVINA 60

Query:    61 PKHAHKLTCEPD-EVFHLKRPE---GIERQHRFKCKKCGLFLYYKHDPSSNIIFIVQGAV 116
               HA+KLT  P   + ++KR     GIE+Q+R+KC+ C L LYY+H P S++ F++  A+
Sbjct:    61 NDHANKLTHNPTPRMVYIKRKSRGNGIEKQYRYKCRSCSLPLYYRHSPDSHVTFVMSNAL 120

Query:   117 VKSSGEMPKMDIYN 130
             +++ GE P   + N
Sbjct:   121 IRNKGESPLTQLLN 134

 Score = 183 (69.5 bits), Expect = 5.4e-55, Sum P(2) = 5.4e-55
 Identities = 42/86 (48%), Positives = 50/86 (58%)

Query:   135 AKPKKIMVTKHTKNMGKFSSVTVSTXXXXXXXXXXXXXXXSYANNARIIEKQLERKGMNK 194
             A  KK++VT+HTKNMGKFSSVTVST               SYANNARIIEKQL+RKG   
Sbjct:   162 ASGKKVVVTRHTKNMGKFSSVTVSTIDEEEDEIEAREIADSYANNARIIEKQLQRKGGKL 221

Query:   195 RKSDSTTLNTGETEVKKPVRGTLIDK 220
                   T        +K  RGTL+++
Sbjct:   222 SDVGIKTKTEDAPPPQKKQRGTLLER 247


>TAIR|locus:2167361 [details] [associations]
            symbol:AT5G63440 "AT5G63440" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] [GO:0009507 "chloroplast" evidence=ISM] EMBL:CP002688
            GenomeReviews:BA000015_GR KO:K09131 Gene3D:3.30.1200.10
            InterPro:IPR003746 Pfam:PF02594 SUPFAM:SSF69786 UniGene:At.26254
            HAMAP:MF_00634 EMBL:AK118693 IPI:IPI00516606 RefSeq:NP_568972.2
            ProteinModelPortal:Q8GWQ6 SMR:Q8GWQ6 PRIDE:Q8GWQ6
            EnsemblPlants:AT5G63440.2 GeneID:836463 KEGG:ath:AT5G63440
            TAIR:At5g63440 HOGENOM:HOG000265504 InParanoid:Q8GWQ6 OMA:FMGRVLG
            PhylomeDB:Q8GWQ6 ProtClustDB:CLSN2680603 Genevestigator:Q8GWQ6
            Uniprot:Q8GWQ6
        Length = 232

 Score = 168 (64.2 bits), Expect = 1.2e-12, P = 1.2e-12
 Identities = 44/132 (33%), Positives = 66/132 (50%)

Query:     1 MPKVISRSIVCSDTKDKEEYGEEKPLHIYYCV-CGQMTLILDCAVEKLPLRRRDGARVID 59
             MPK   R+     ++D    G +  L +YYC  CG   LI D  ++K+P R+ D + V+D
Sbjct:     1 MPK---RTTHTYSSEDAAPDGPDSDLFVYYCKHCGSHVLITDTQLQKMPKRKTDRSNVLD 57

Query:    60 GPKHAHKLTCEPDEVFHLKRPEG-IERQHRFKCKKCGLFLYYKHDPS---SNIIFIVQGA 115
                H  +L         LKR EG +ERQ R  C  C LF+ Y+ + +   ++ I+IV GA
Sbjct:    58 KKTHLARLNVSEGGKVLLKRGEGKMERQFRMNCIGCELFVCYRAEENLETASFIYIVDGA 117

Query:   116 VVKSSGEMPKMD 127
             +   + E    D
Sbjct:   118 LSAVAAETNPQD 129


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.318   0.134   0.393    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      220       205   0.00096  111 3  11 22  0.36    33
                                                     31  0.47    35


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  4
  No. of states in DFA:  579 (62 KB)
  Total size of DFA:  164 KB (2097 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:01
  No. of threads or processors used:  24
  Search cpu time:  16.89u 0.08s 16.97t   Elapsed:  00:00:10
  Total cpu time:  16.89u 0.08s 16.97t   Elapsed:  00:00:11
  Start:  Thu Aug 15 11:34:33 2013   End:  Thu Aug 15 11:34:44 2013

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