Query psy247
Match_columns 413
No_of_seqs 227 out of 2037
Neff 7.6
Searched_HMMs 46136
Date Fri Aug 16 17:04:42 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy247.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/247hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PRK10879 proline aminopeptidas 100.0 3.5E-69 7.5E-74 551.8 34.3 324 1-413 33-429 (438)
2 KOG2414|consensus 100.0 2.4E-69 5.3E-74 519.8 25.3 323 1-413 94-481 (488)
3 KOG2737|consensus 100.0 5E-61 1.1E-65 457.9 17.1 333 3-413 58-475 (492)
4 PRK13607 proline dipeptidase; 100.0 1.7E-57 3.7E-62 464.9 30.3 321 2-404 43-439 (443)
5 COG0006 PepP Xaa-Pro aminopept 100.0 6.1E-57 1.3E-61 455.8 31.8 307 3-413 25-384 (384)
6 PRK09795 aminopeptidase; Provi 100.0 3.5E-55 7.7E-60 439.4 31.9 298 7-411 19-357 (361)
7 TIGR02993 ectoine_eutD ectoine 100.0 4.8E-52 1E-56 420.6 29.7 309 7-412 30-390 (391)
8 PRK14575 putative peptidase; P 100.0 3.4E-51 7.3E-56 416.0 32.2 240 71-411 160-404 (406)
9 PRK14576 putative endopeptidas 100.0 6.3E-50 1.4E-54 406.5 32.2 241 70-411 158-403 (405)
10 PRK15173 peptidase; Provisiona 100.0 6.5E-50 1.4E-54 394.8 29.0 258 54-412 53-322 (323)
11 PRK12897 methionine aminopepti 100.0 1.2E-48 2.6E-53 372.8 26.4 236 88-403 3-247 (248)
12 PRK07281 methionine aminopepti 100.0 9.7E-49 2.1E-53 378.8 25.8 245 87-408 2-283 (286)
13 TIGR00500 met_pdase_I methioni 100.0 2.6E-48 5.6E-53 370.1 26.5 236 88-403 2-246 (247)
14 PRK12318 methionine aminopepti 100.0 1.1E-47 2.4E-52 373.2 25.8 246 82-407 35-291 (291)
15 PRK05716 methionine aminopepti 100.0 9.2E-47 2E-51 360.3 26.5 241 87-408 3-252 (252)
16 PLN03158 methionine aminopepti 100.0 1.4E-46 3.1E-51 377.1 26.3 249 82-410 130-387 (396)
17 PRK12896 methionine aminopepti 100.0 6.1E-46 1.3E-50 355.3 25.6 238 86-403 7-254 (255)
18 cd01087 Prolidase Prolidase. E 100.0 1.1E-45 2.4E-50 351.2 25.1 222 95-403 1-243 (243)
19 cd01090 Creatinase Creatine am 100.0 4.3E-45 9.3E-50 343.9 25.0 225 95-403 1-228 (228)
20 cd01086 MetAP1 Methionine Amin 100.0 1E-42 2.2E-47 329.7 25.4 229 95-403 1-238 (238)
21 cd01092 APP-like Similar to Pr 100.0 2.7E-41 5.9E-46 312.7 25.2 205 95-397 1-208 (208)
22 cd01091 CDC68-like Related to 100.0 3.3E-41 7.2E-46 319.9 22.2 230 95-403 1-243 (243)
23 cd01085 APP X-Prolyl Aminopept 100.0 4.5E-40 9.7E-45 308.7 24.0 208 96-401 5-222 (224)
24 PF00557 Peptidase_M24: Metall 100.0 1.6E-38 3.5E-43 294.4 20.6 201 96-394 1-207 (207)
25 cd01066 APP_MetAP A family inc 100.0 1.1E-37 2.3E-42 286.4 24.1 204 95-397 1-207 (207)
26 COG0024 Map Methionine aminope 100.0 2.8E-36 6.1E-41 283.3 24.9 237 88-404 4-252 (255)
27 cd01089 PA2G4-like Related to 100.0 6E-36 1.3E-40 281.8 22.0 213 95-403 1-228 (228)
28 KOG2738|consensus 100.0 2.8E-35 6.2E-40 273.9 21.5 242 87-408 114-364 (369)
29 PRK08671 methionine aminopepti 100.0 7.3E-32 1.6E-36 262.7 25.6 183 94-367 1-189 (291)
30 TIGR00501 met_pdase_II methion 100.0 5.2E-31 1.1E-35 257.0 24.6 184 92-366 2-191 (295)
31 PTZ00053 methionine aminopepti 100.0 7.6E-31 1.6E-35 265.9 25.5 194 88-367 151-360 (470)
32 TIGR00495 crvDNA_42K 42K curve 100.0 1.1E-30 2.5E-35 262.6 25.2 211 87-369 11-234 (389)
33 cd01088 MetAP2 Methionine Amin 100.0 1.4E-30 3.1E-35 253.7 24.0 182 95-367 1-188 (291)
34 KOG1189|consensus 99.9 6.9E-27 1.5E-31 239.4 19.8 252 73-412 121-385 (960)
35 KOG2413|consensus 99.9 1.7E-26 3.7E-31 233.9 19.2 226 78-397 296-536 (606)
36 COG5406 Nucleosome binding fac 99.8 5.3E-19 1.1E-23 178.6 18.5 257 74-411 155-424 (1001)
37 PF05195 AMP_N: Aminopeptidase 99.4 5.6E-14 1.2E-18 121.5 2.2 83 1-86 33-116 (134)
38 KOG2775|consensus 99.2 3.8E-10 8.2E-15 106.5 12.9 190 90-364 80-284 (397)
39 KOG2776|consensus 99.0 5.9E-09 1.3E-13 100.8 13.7 151 88-294 14-173 (398)
40 KOG2737|consensus 98.3 1.1E-07 2.4E-12 92.7 0.0 216 74-345 182-419 (492)
41 KOG2414|consensus 98.2 1.3E-06 2.8E-11 86.2 3.9 179 146-371 285-464 (488)
42 PRK13607 proline dipeptidase; 98.2 4.9E-07 1.1E-11 93.3 1.0 49 143-192 214-263 (443)
43 PRK07281 methionine aminopepti 98.1 8.4E-06 1.8E-10 79.4 7.7 198 141-371 65-272 (286)
44 PRK12897 methionine aminopepti 98.1 1E-06 2.2E-11 84.1 0.9 51 141-192 61-111 (248)
45 cd01090 Creatinase Creatine am 98.1 1.2E-06 2.5E-11 82.7 1.0 159 143-371 55-221 (228)
46 TIGR00500 met_pdase_I methioni 98.0 1.2E-06 2.5E-11 83.5 -1.1 51 141-192 60-110 (247)
47 cd01087 Prolidase Prolidase. E 97.7 3.1E-05 6.8E-10 73.4 4.0 45 147-192 52-96 (243)
48 PRK12318 methionine aminopepti 97.4 5.3E-05 1.2E-09 74.1 0.6 50 141-191 102-151 (291)
49 PRK15173 peptidase; Provisiona 97.1 0.00013 2.8E-09 72.5 0.4 37 156-193 161-197 (323)
50 PRK14575 putative peptidase; P 96.9 0.00029 6.4E-09 72.1 0.4 37 155-192 243-279 (406)
51 PLN03158 methionine aminopepti 96.9 0.0089 1.9E-07 60.9 11.0 110 244-394 127-247 (396)
52 cd01086 MetAP1 Methionine Amin 96.6 0.021 4.5E-07 53.8 11.2 97 260-394 2-105 (238)
53 cd01085 APP X-Prolyl Aminopept 96.3 0.0019 4.1E-08 60.8 2.0 50 142-192 53-105 (224)
54 PF01321 Creatinase_N: Creatin 96.3 0.0024 5.2E-08 53.9 2.1 78 7-89 17-132 (132)
55 PRK05716 methionine aminopepti 95.8 0.083 1.8E-06 50.2 10.8 96 261-394 13-115 (252)
56 cd01088 MetAP2 Methionine Amin 95.5 0.13 2.8E-06 50.3 11.0 97 260-394 2-100 (291)
57 PRK12896 methionine aminopepti 95.5 0.1 2.2E-06 49.6 10.0 108 248-394 4-120 (255)
58 KOG2738|consensus 95.3 0.088 1.9E-06 50.7 8.4 93 262-394 125-226 (369)
59 COG0006 PepP Xaa-Pro aminopept 94.7 0.031 6.8E-07 56.7 4.0 25 179-203 182-206 (384)
60 PRK10879 proline aminopeptidas 94.0 0.055 1.2E-06 56.0 4.1 23 178-200 200-222 (438)
61 cd01092 APP-like Similar to Pr 93.9 0.53 1.2E-05 42.9 10.2 96 261-394 3-100 (208)
62 cd01066 APP_MetAP A family inc 93.6 1.2 2.6E-05 40.0 11.9 44 96-139 102-145 (207)
63 TIGR00501 met_pdase_II methion 93.5 0.87 1.9E-05 44.6 11.3 95 260-394 6-104 (295)
64 PF00557 Peptidase_M24: Metall 93.1 0.71 1.5E-05 42.2 9.6 95 261-393 2-99 (207)
65 PRK09795 aminopeptidase; Provi 92.9 0.1 2.2E-06 52.6 3.9 32 178-209 154-185 (361)
66 COG0024 Map Methionine aminope 92.5 1.2 2.7E-05 42.5 10.3 87 260-370 12-103 (255)
67 PRK08671 methionine aminopepti 92.4 1.6 3.5E-05 42.6 11.5 94 260-393 3-100 (291)
68 TIGR00495 crvDNA_42K 42K curve 92.0 2.2 4.7E-05 43.6 12.1 102 261-395 21-131 (389)
69 cd01089 PA2G4-like Related to 91.6 2.5 5.4E-05 39.6 11.3 107 261-395 3-113 (228)
70 cd01091 CDC68-like Related to 88.6 4.7 0.0001 38.3 10.6 41 97-137 120-160 (243)
71 PTZ00053 methionine aminopepti 87.5 5.9 0.00013 41.3 11.2 89 263-393 162-262 (470)
72 TIGR02993 ectoine_eutD ectoine 81.7 14 0.0003 37.7 10.8 43 97-139 271-313 (391)
73 PRK14576 putative endopeptidas 77.3 20 0.00044 36.6 10.5 93 263-394 187-281 (405)
74 KOG2775|consensus 72.0 19 0.00042 35.2 8.0 87 259-370 85-177 (397)
75 KOG2776|consensus 62.4 49 0.0011 33.2 8.8 109 262-403 24-140 (398)
76 KOG2413|consensus 60.6 7.7 0.00017 41.1 3.2 32 12-48 44-75 (606)
77 PF14826 FACT-Spt16_Nlob: FACT 59.7 6.1 0.00013 35.2 2.0 28 15-47 51-78 (163)
78 COG2016 Predicted RNA-binding 25.3 41 0.00089 29.9 1.5 38 170-235 78-115 (161)
79 TIGR02531 yecD_yerC TrpR-relat 23.3 2.7E+02 0.0059 22.0 5.7 47 81-129 7-60 (88)
No 1
>PRK10879 proline aminopeptidase P II; Provisional
Probab=100.00 E-value=3.5e-69 Score=551.82 Aligned_cols=324 Identities=37% Similarity=0.632 Sum_probs=280.4
Q ss_pred CCCCcceeeeecCceEEecCCCCCCEEEEEEcCCCCCceEEEEEeCcchhhhccCCCcccHhh---------------Hh
Q psy247 1 MTEKIPYIFRQNTDFFYFTGCLEPDSAVVIHGASDENFKSELFVKRKDAKAELWDGPRTGKAQ---------------LN 65 (413)
Q Consensus 1 ~~~~~~~~f~q~~n~~YltG~~~~~~~lv~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~---------------~~ 65 (413)
+++|++|+|||++||+||||+.+|+++|++..++....+.+||++++|+..++|.|++.+.++ |.
T Consensus 33 ~~~d~~y~Frq~s~F~YltG~~ep~~~lv~~~~~~~~~~~~Lf~~~~d~~~e~W~G~~~~~~~a~~~~g~d~v~~~~~l~ 112 (438)
T PRK10879 33 RSADSEYPYRQNSDFWYFTGFNEPEAVLVLIKSDDTHNHSVLFNRVRDLTAEIWFGRRLGQDAAPEKLGVDRALPFSEIN 112 (438)
T ss_pred cCCCCCCCccCCCceeeeeCCCCCCeEEEEecCCCCCCeEEEEeCCCCCCccEEcCcCCCHHHHHHHhCCCEEeeHHHHH
Confidence 578999999999999999999999999998554322235899999999999999999988872 22
Q ss_pred hhcC----CC---------------------------------CCCcccchHHHHHHHHccCCHHHHHHHHHHHHHHHHH
Q psy247 66 GYVP----RR---------------------------------KDYSWNVPKQLFHQLRLYKSDSEQEMMRETCRIASEG 108 (413)
Q Consensus 66 ~~l~----~~---------------------------------~~~~~~d~~~~l~~~R~vKs~~Ei~~~r~A~~i~~~~ 108 (413)
+.|. .. +..+++|+.+++.++|+|||++||++||+|+++++++
T Consensus 113 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~lR~iKs~~EI~~~r~A~~i~~~a 192 (438)
T PRK10879 113 QQLYQLLNGLDVVYHAQGEYAYADEIVFSALEKLRKGSRQNLTAPATLTDWRPWVHEMRLFKSPEEIAVLRRAGEISALA 192 (438)
T ss_pred HHHHHHhcCCceEEecCCccccchhHHHHHHHHHHhhhccccCCcccchHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHH
Confidence 2221 10 1134678999999999999999999999999999999
Q ss_pred HHHHHhccCCCCCHHHHHHHHHHHHHHcCCCCCCCCceeecCCCccccccccCCcccccCcceecccccCCCCCCHHHHH
Q psy247 109 FKETIGFSKPGRTEHELFTKFDYEVRMRGAQILAYPPVVASGDNANVIHYVHNNQKCCHGDLLLMDAGFSKPGRTEHELF 188 (413)
Q Consensus 109 ~~~~~~~~~~G~tE~el~~~~~~~~~~~G~~~~~~~~iv~sG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (413)
+.++++.++||+||.||++.+.+.++++|+...+|
T Consensus 193 ~~~~~~~~~pG~tE~ei~a~~~~~~~~~G~~~~~~--------------------------------------------- 227 (438)
T PRK10879 193 HTRAMEKCRPGMFEYQLEGEIHHEFNRHGARYPSY--------------------------------------------- 227 (438)
T ss_pred HHHHHHhcCCCCcHHHHHHHHHHHHHHCCCCCCCC---------------------------------------------
Confidence 99999999999999999999999999988765444
Q ss_pred hhhHHHHHhhcccccCCCceeccCCCccccccccCCccccCCCEEEEecceeeCcEEeceEEEEeecCCCCHHHHHHHHH
Q psy247 189 TKFDYEVRMRGAQILAYPPVVASGDNANVIHYVHNNQKCCHGDLLLMDAGCELNGYDSDITRTWPISGQFTDHQKVLYEI 268 (413)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~v~~g~~~~~~h~~~~~~~i~~Gd~v~iD~g~~~~GY~aDitRT~~v~G~~~~~~~~~~~~ 268 (413)
++++++|.|++++||.++++++++||+|++|+|++|+||++|+||||+++|+|+++|+++|++
T Consensus 228 -----------------~~iv~~G~na~~~H~~~~~~~l~~GDlVliD~G~~~~GY~sDitRT~~v~G~~s~~q~~~y~~ 290 (438)
T PRK10879 228 -----------------NTIVGSGENGCILHYTENESEMRDGDLVLIDAGCEYKGYAGDITRTFPVNGKFTPAQREIYDI 290 (438)
T ss_pred -----------------CcEEEEcCccccccCCCCccccCCCCEEEEEeCeEECCEEEEeEEEEEECCcCCHHHHHHHHH
Confidence 455566666777888888899999999999999999999999999999989999999999999
Q ss_pred HHHHHHHHHHhcccCCCCHHHHHHHH--HH----H--------------HcCc-ccccccccccCCCCccCCCCCCCCCC
Q psy247 269 VLDTQLKLLKLCEKSDSALNFIYRYA--YV----F--------------QIGF-KFCPHHSSHYLGMDVHDCAAIPRTIP 327 (413)
Q Consensus 269 ~~~a~~~~~~~lkp~G~~~~ei~~~~--~~----~--------------~~g~-~~~~h~~GHgiGl~~~E~p~~~~~~~ 327 (413)
++++++++++++|| |+++++|++++ .+ . +.++ .+++|++||++|+++||.|.+.
T Consensus 291 vl~a~~aai~~~kp-G~~~~~v~~~~~~~~~~~l~~~Gl~~~~~~~~~~~~~~~~~~~Hg~GH~iGldvHd~~~~~---- 365 (438)
T PRK10879 291 VLESLETSLRLYRP-GTSIREVTGEVVRIMVSGLVKLGILKGDVDQLIAENAHRPFFMHGLSHWLGLDVHDVGVYG---- 365 (438)
T ss_pred HHHHHHHHHHHcCC-CCcHHHHHHHHHHHHHHHHHHhCCcCCCHHHHHHhccCccccCCCCccccCcCcCcCCCcC----
Confidence 99999999999999 99999999987 11 1 2344 5889999999999999988742
Q ss_pred CCCCcceecCCCCccccCCCCCCCCCCCCCcEEEeCCeeeEcCCCCCcccccccceEEEceeEEEeCCCCcccCCCCCCC
Q psy247 328 VAPGVVFTVEPGMDVHDCAAIPRTIPVAPGMVFTVEPGVYISKDCKETRPEFRGMGIRIEDDILIDKSSNVENLSAMCPK 407 (413)
Q Consensus 328 ~~~g~~~~~~pg~~~~~~~~~~~~~~L~~GMv~~iEPgi~~~~~~~~~~~~~~~~gvriED~vlVt~~G~~e~Lt~~~p~ 407 (413)
.+.+.+|+||||||||||+|++++ +.++++|+++|+||||+|+||++|+ |+||..+||
T Consensus 366 --------------------~~~~~~L~~GmV~tvEPgiY~~~~-~~~~~~~~~~GiRiED~VlVT~~G~-e~LT~~~pk 423 (438)
T PRK10879 366 --------------------QDRSRILEPGMVLTVEPGLYIAPD-ADVPEQYRGIGIRIEDDIVITETGN-ENLTASVVK 423 (438)
T ss_pred --------------------CCCCCcCCCCCEEEECCEEEECCC-cCcccccCccEEEeccEEEECCCcC-eEcCccCCC
Confidence 235789999999999999999864 5677888999999999999999999 999988999
Q ss_pred CccccC
Q psy247 408 NIDEIE 413 (413)
Q Consensus 408 ~~~~ie 413 (413)
++++||
T Consensus 424 ~~~~iE 429 (438)
T PRK10879 424 KPDEIE 429 (438)
T ss_pred CHHHHH
Confidence 999997
No 2
>KOG2414|consensus
Probab=100.00 E-value=2.4e-69 Score=519.85 Aligned_cols=323 Identities=51% Similarity=0.891 Sum_probs=281.0
Q ss_pred CCCCcceeeeecCceEEecCCCCCCEEEEEEcCCCCCceEEEEEeCcchhhhccCCCcccHh---------------hHh
Q psy247 1 MTEKIPYIFRQNTDFFYFTGCLEPDSAVVIHGASDENFKSELFVKRKDAKAELWDGPRTGKA---------------QLN 65 (413)
Q Consensus 1 ~~~~~~~~f~q~~n~~YltG~~~~~~~lv~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~---------------~~~ 65 (413)
|+++++|+|||++|||||||+.+|++++++......+....+|++++++.++.|+|+|.|.+ ++.
T Consensus 94 msg~ipY~f~Qd~df~YLtGc~EP~~vl~l~~~d~~s~~~~lf~p~kdP~~e~WeG~rtG~~~a~~if~v~ea~~~s~l~ 173 (488)
T KOG2414|consen 94 MSGAIPYTFRQDNDFYYLTGCLEPDAVLLLLKGDERSVAYDLFMPPKDPTAELWEGPRTGTDGASEIFGVDEAYPLSGLA 173 (488)
T ss_pred hcCccceeeecCCCeEEEeccCCCCeeEEEeecccccceeeEecCCCCccHHhhcCccccchhhhhhhcchhhcchhhHH
Confidence 78999999999999999999999999999874222335789999999999999999998865 122
Q ss_pred hhcCCC-------------------------------CCCcccchHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHh
Q psy247 66 GYVPRR-------------------------------KDYSWNVPKQLFHQLRLYKSDSEQEMMRETCRIASEGFKETIG 114 (413)
Q Consensus 66 ~~l~~~-------------------------------~~~~~~d~~~~l~~~R~vKs~~Ei~~~r~A~~i~~~~~~~~~~ 114 (413)
.+|++. ..-.++.++.+++++|.||||+|+++||+||.|+++++...+-
T Consensus 174 ~~L~k~~~~~~~i~~d~~ss~a~s~~~~~~dl~~~~~~~~~~~~~~~li~~lRlIKSpaEl~~Mr~a~~I~sq~~~~~m~ 253 (488)
T KOG2414|consen 174 VFLPKMSALLYKIWQDKASSKASSALKNMQDLLGFQSKSSTVRPVSNLIERLRLIKSPAELELMREACNIASQTFSETMF 253 (488)
T ss_pred HHHHHHHhhhhhhhhhhccchhhhHHHHHHhhhhhcccCcccccHHHHHHHHHccCCHHHHHHHHHHhhhhhHHHHHHHh
Confidence 222211 0124788999999999999999999999999999999999999
Q ss_pred ccCCCCCHHHHHHHHHHHHHHcCCCCCCCCceeecCCCccccccccCCcccccCcceecccccCCCCCCHHHHHhhhHHH
Q psy247 115 FSKPGRTEHELFTKFDYEVRMRGAQILAYPPVVASGDNANVIHYVHNNQKCCHGDLLLMDAGFSKPGRTEHELFTKFDYE 194 (413)
Q Consensus 115 ~~~~G~tE~el~~~~~~~~~~~G~~~~~~~~iv~sG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (413)
.-|+...|..|.+.++++++.+|++..+
T Consensus 254 ~sr~~~~E~~l~a~~eye~r~rGad~~A---------------------------------------------------- 281 (488)
T KOG2414|consen 254 GSRDFHNEAALSALLEYECRRRGADRLA---------------------------------------------------- 281 (488)
T ss_pred hccCCcchhhHhhhhhhheeecCccccc----------------------------------------------------
Confidence 9999999999998888888777776554
Q ss_pred HHhhcccccCCCceeccCCCccccccccCCccccCCCEEEEecceeeCcEEeceEEEEeecCCCCHHHHHHHHHHHHHHH
Q psy247 195 VRMRGAQILAYPPVVASGDNANVIHYVHNNQKCCHGDLLLMDAGCELNGYDSDITRTWPISGQFTDHQKVLYEIVLDTQL 274 (413)
Q Consensus 195 ~~~~~~~~~~~~~~v~~g~~~~~~h~~~~~~~i~~Gd~v~iD~g~~~~GY~aDitRT~~v~G~~~~~~~~~~~~~~~a~~ 274 (413)
|+|+|+.|.|+.++||+.|+..++++|+|++|.||+++||++||||||+++|+||+.|+++|++++..|+
T Consensus 282 ----------YpPVVAgG~na~tIHY~~Nnq~l~d~emVLvDaGcelgGYvSDITRTWP~sGkFs~~Qr~LYeavL~vq~ 351 (488)
T KOG2414|consen 282 ----------YPPVVAGGKNANTIHYVRNNQLLKDDEMVLVDAGCELGGYVSDITRTWPISGKFSDAQRDLYEAVLQVQE 351 (488)
T ss_pred ----------cCCeeecCcccceEEEeecccccCCCcEEEEecCcccCceEccceeccCCCCccCcHHHHHHHHHHHHHH
Confidence 5555555666667777888888999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcccC-CCCHHHHHHHH------HHHH------------cCcccccccccccCCCCccCCCCCCCCCCCCCCccee
Q psy247 275 KLLKLCEKS-DSALNFIYRYA------YVFQ------------IGFKFCPHHSSHYLGMDVHDCAAIPRTIPVAPGVVFT 335 (413)
Q Consensus 275 ~~~~~lkp~-G~~~~ei~~~~------~~~~------------~g~~~~~h~~GHgiGl~~~E~p~~~~~~~~~~g~~~~ 335 (413)
.+++.++|+ |.+++++|... .+.+ ++.+++||++||-+|++|||.|..
T Consensus 352 ecik~c~~~~g~sL~~l~~~s~~Ll~~~Lk~lGI~kt~~ee~~~~~klcPHhVgHyLGmDVHD~p~v------------- 418 (488)
T KOG2414|consen 352 ECIKYCKPSNGTSLSQLFERSNELLGQELKELGIRKTDREEMIQAEKLCPHHVGHYLGMDVHDCPTV------------- 418 (488)
T ss_pred HHHHhhcCCCCccHHHHHHHHHHHHHHHHHHhCcccchHHHHHhhhhcCCcccchhcCcccccCCCC-------------
Confidence 999999986 89999999987 2222 334688999999999999999984
Q ss_pred cCCCCccccCCCCCCCCCCCCCcEEEeCCeeeEcCCCCCcccccccceEEEceeEEEeCCCCcccCCCCCCCCccccC
Q psy247 336 VEPGMDVHDCAAIPRTIPVAPGMVFTVEPGVYISKDCKETRPEFRGMGIRIEDDILIDKSSNVENLSAMCPKNIDEIE 413 (413)
Q Consensus 336 ~~pg~~~~~~~~~~~~~~L~~GMv~~iEPgi~~~~~~~~~~~~~~~~gvriED~vlVt~~G~~e~Lt~~~p~~~~~ie 413 (413)
+.+.+|+||||||||||+|+|.+ ++++++|+|+|+||||+|+|+++|+ ++||..+||++.+||
T Consensus 419 -------------~r~~pL~pg~ViTIEPGvYIP~d-~d~P~~FrGIGiRIEDDV~i~edg~-evLT~a~pKei~~ie 481 (488)
T KOG2414|consen 419 -------------SRDIPLQPGMVITIEPGVYIPED-DDPPEEFRGIGIRIEDDVAIGEDGP-EVLTAACPKEIIEIE 481 (488)
T ss_pred -------------CCCccCCCCceEEecCceecCcc-CCCchHhcCceEEeecceEeccCCc-eeehhcccCCHHHHH
Confidence 46889999999999999999987 4999999999999999999999999 999999999999987
No 3
>KOG2737|consensus
Probab=100.00 E-value=5e-61 Score=457.88 Aligned_cols=333 Identities=34% Similarity=0.531 Sum_probs=278.4
Q ss_pred CCcceeeeecCceEEecCCCCCCEEEEEEcCCCCCceEEEEEeCcchhhhccCCCcccHhhHhh---------------h
Q psy247 3 EKIPYIFRQNTDFFYFTGCLEPDSAVVIHGASDENFKSELFVKRKDAKAELWDGPRTGKAQLNG---------------Y 67 (413)
Q Consensus 3 ~~~~~~f~q~~n~~YltG~~~~~~~lv~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~---------------~ 67 (413)
.|..+.|||++-|+||+|+.+|++..+++..+ ++++||+|+.+.....|.|...+.++++. +
T Consensus 58 tD~~~lFrQesYF~~lfGV~ep~~yg~idv~t---gKstLFvPrlp~~ya~W~G~i~~l~~fke~y~VDev~yvde~~~~ 134 (492)
T KOG2737|consen 58 TDTTELFRQESYFAYLFGVREPGFYGAIDVGT---GKSTLFVPRLPDSYATWMGEILSLQHFKEKYAVDEVFYVDEIIQV 134 (492)
T ss_pred cchHHHHhhhhHHHHhhcCCCccceEEEEecC---CceEEEecCCChhhceeccccCCHHHHHHHhhhhheeehHhHHHH
Confidence 37789999999999999999999988888765 47999999999999999999888774432 2
Q ss_pred cCCC-C------------------CC----------cccchHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHhccCC
Q psy247 68 VPRR-K------------------DY----------SWNVPKQLFHQLRLYKSDSEQEMMRETCRIASEGFKETIGFSKP 118 (413)
Q Consensus 68 l~~~-~------------------~~----------~~~d~~~~l~~~R~vKs~~Ei~~~r~A~~i~~~~~~~~~~~~~~ 118 (413)
++.. + .. ...-..+++.+.|.|||+.||+.||.|++|+++++.+++++++|
T Consensus 135 ~~~~~~k~l~~l~g~nTDsg~v~~e~~f~g~~kf~~D~~~lyp~m~E~RviKs~~EieviRya~kISseaH~~vM~~~~p 214 (492)
T KOG2737|consen 135 LKGSKPKLLYLLRGLNTDSGNVLKEASFAGISKFETDLTLLYPILAECRVIKSSLEIEVIRYANKISSEAHIEVMRAVRP 214 (492)
T ss_pred hhccCccceeeeeccccCcccccCcccccchhhcccCchhhhHHHhhheeeCCHHHHHHHHHHHhhccHHHHHHHHhCCc
Confidence 2110 0 00 11234568899999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHcCCCCCCCCceeecCCCccccccccCCcccccCcceecccccCCCCCCHHHHHhhhHHHHHhh
Q psy247 119 GRTEHELFTKFDYEVRMRGAQILAYPPVVASGDNANVIHYVHNNQKCCHGDLLLMDAGFSKPGRTEHELFTKFDYEVRMR 198 (413)
Q Consensus 119 G~tE~el~~~~~~~~~~~G~~~~~~~~iv~sG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (413)
|+.|++++..++.... +.+
T Consensus 215 g~~Eyq~eslF~hh~y-------------------------------------------------------------~~G 233 (492)
T KOG2737|consen 215 GMKEYQLESLFLHHSY-------------------------------------------------------------SYG 233 (492)
T ss_pred hHhHHhHHHHHHHhhh-------------------------------------------------------------ccC
Confidence 9999999988775543 345
Q ss_pred cccccCCCceeccCCCcccccc----ccCCccccCCCEEEEecceeeCcEEeceEEEEeecCCCCHHHHHHHHHHHHHHH
Q psy247 199 GAQILAYPPVVASGDNANVIHY----VHNNQKCCHGDLLLMDAGCELNGYDSDITRTWPISGQFTDHQKVLYEIVLDTQL 274 (413)
Q Consensus 199 ~~~~~~~~~~v~~g~~~~~~h~----~~~~~~i~~Gd~v~iD~g~~~~GY~aDitRT~~v~G~~~~~~~~~~~~~~~a~~ 274 (413)
||+..+|.+|+++|.|++++|| .||++.|+.||++++|+|++|.+|.+||||+|+.+|+|+++|+.+|+++++++.
T Consensus 234 GcRh~sYtcIc~sG~ns~vLHYgha~apNd~~iqdgd~cLfDmGaey~~yaSDITcsFP~nGKFTadqk~VYnaVLda~n 313 (492)
T KOG2737|consen 234 GCRHLSYTCICASGDNSAVLHYGHAGAPNDRTIQDGDLCLFDMGAEYHFYASDITCSFPVNGKFTADQKLVYNAVLDASN 313 (492)
T ss_pred CccccccceeeecCCCcceeeccccCCCCCcccCCCCEEEEecCcceeeeecccceeccCCCccchhHHHHHHHHHHHHH
Confidence 6777788888888999999998 789999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcccCCCCHHHHHHHH-------------------HHHH--cCcccccccccccCCCCccCCCCCCCCCCCCCCcc
Q psy247 275 KLLKLCEKSDSALNFIYRYA-------------------YVFQ--IGFKFCPHHSSHYLGMDVHDCAAIPRTIPVAPGVV 333 (413)
Q Consensus 275 ~~~~~lkp~G~~~~ei~~~~-------------------~~~~--~g~~~~~h~~GHgiGl~~~E~p~~~~~~~~~~g~~ 333 (413)
++++++|| |+.|-|++... .+.+ .|..++||++||.+|+++||....+. |+-
T Consensus 314 avm~a~Kp-Gv~W~Dmh~La~kvlle~laq~gIl~gdvd~m~~ar~~~vF~PHGLGH~lGlDvHDvGGyp~------~~~ 386 (492)
T KOG2737|consen 314 AVMEAMKP-GVWWVDMHKLAEKVLLEHLAQMGILKGDVDEMVEARLGAVFMPHGLGHFLGLDVHDVGGYPE------GVE 386 (492)
T ss_pred HHHHhcCC-CCccccHHHHHHHHHHHHHHhcCceeccHHHHHHhccCeeeccccccccccccccccCCCCC------CCC
Confidence 99999999 99999999876 1222 23468999999999999999988652 221
Q ss_pred eecCCCCccccCCCCCCCCCCCCCcEEEeCCeeeEcCC---------------CCCcccccccc-eEEEceeEEEeCCCC
Q psy247 334 FTVEPGMDVHDCAAIPRTIPVAPGMVFTVEPGVYISKD---------------CKETRPEFRGM-GIRIEDDILIDKSSN 397 (413)
Q Consensus 334 ~~~~pg~~~~~~~~~~~~~~L~~GMv~~iEPgi~~~~~---------------~~~~~~~~~~~-gvriED~vlVt~~G~ 397 (413)
-.-+||+. ..+..+.|++|||+|+|||+|+... +..+..+|+++ ||||||+|+||++|.
T Consensus 387 rp~~P~l~-----~LR~aR~L~e~MviTvEPGcYFi~~Ll~ealadp~~~~f~n~e~~~rfr~~GGVRIEdDv~vt~~G~ 461 (492)
T KOG2737|consen 387 RPDEPGLR-----SLRTARHLKEGMVITVEPGCYFIDFLLDEALADPARAEFLNREVLQRFRGFGGVRIEDDVVVTKSGI 461 (492)
T ss_pred CCCcchhh-----hhhhhhhhhcCcEEEecCChhHHHHHHHHHhcChHhhhhhhHHHHHHhhccCceEeeccEEEecccc
Confidence 22234432 1345789999999999999998742 34456678887 699999999999999
Q ss_pred cccCCCCCCCCccccC
Q psy247 398 VENLSAMCPKNIDEIE 413 (413)
Q Consensus 398 ~e~Lt~~~p~~~~~ie 413 (413)
|+||. +|+++++||
T Consensus 462 -enlt~-vprtveeIE 475 (492)
T KOG2737|consen 462 -ENLTC-VPRTVEEIE 475 (492)
T ss_pred -ccccC-CCCCHHHHH
Confidence 99999 799999997
No 4
>PRK13607 proline dipeptidase; Provisional
Probab=100.00 E-value=1.7e-57 Score=464.91 Aligned_cols=321 Identities=25% Similarity=0.386 Sum_probs=245.4
Q ss_pred CCCcceeeeecCceEEecCCC-CCCEEEEEEcCCCCCceEEEEEeCcchhhhccCCCcccHh----------------hH
Q psy247 2 TEKIPYIFRQNTDFFYFTGCL-EPDSAVVIHGASDENFKSELFVKRKDAKAELWDGPRTGKA----------------QL 64 (413)
Q Consensus 2 ~~~~~~~f~q~~n~~YltG~~-~~~~~lv~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~----------------~~ 64 (413)
.+|++|+|||+++|+||||+. +|++++++..+..+ +.+||. +.| .|.++....+ ++
T Consensus 43 ~~D~~~~Frq~s~F~yl~G~~~~p~~~~~i~~~~~~--~~~l~~-~~d----~W~g~~~~~~~~~~~~~~~~~~~~~~~~ 115 (443)
T PRK13607 43 LDDHDYPFKVNPQFKAWVPVTQVPNCWLLVDGVNKP--KLWFYQ-PVD----YWHNVEPLPESFWTEEVDIKALTKADGI 115 (443)
T ss_pred CCCCCCCcCcCCCcchhcCCCCCCCeEEEEEeCCCC--EEEEEe-cCc----cccCCCCCchHHHHHhcChHhcccHHHH
Confidence 579999999999999999996 79999999754322 455555 454 5876542211 23
Q ss_pred hhhcCCC---------------------CCCcccchHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHhccCCCCCHH
Q psy247 65 NGYVPRR---------------------KDYSWNVPKQLFHQLRLYKSDSEQEMMRETCRIASEGFKETIGFSKPGRTEH 123 (413)
Q Consensus 65 ~~~l~~~---------------------~~~~~~d~~~~l~~~R~vKs~~Ei~~~r~A~~i~~~~~~~~~~~~~~G~tE~ 123 (413)
...|... +.....++...+.++|+|||++||++||+|++++++++.++++.+++|+||.
T Consensus 116 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lR~iKs~~EI~~mr~A~~i~~~a~~~~~~~i~pG~tE~ 195 (443)
T PRK13607 116 ASLLPADRGNVAYIGEVPERALALGFEASNINPKGVLDYLHYHRAYKTDYELACMREAQKIAVAGHRAAKEAFRAGMSEF 195 (443)
T ss_pred HHhhccCCCceEEecccccccccccCcccccChHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHH
Confidence 3333210 0123456888899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCCCCCCCceeecCCCccccccccCCcccccCcceecccccCCCCCCHHHHHhhhHHHHHhhccccc
Q psy247 124 ELFTKFDYEVRMRGAQILAYPPVVASGDNANVIHYVHNNQKCCHGDLLLMDAGFSKPGRTEHELFTKFDYEVRMRGAQIL 203 (413)
Q Consensus 124 el~~~~~~~~~~~G~~~~~~~~iv~sG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (413)
||.+.+.... ..++. ..
T Consensus 196 ei~~~~~~~~-~~~~~--------------------------------------------------------------~~ 212 (443)
T PRK13607 196 DINLAYLTAT-GQRDN--------------------------------------------------------------DV 212 (443)
T ss_pred HHHHHHHHHh-CCCCc--------------------------------------------------------------CC
Confidence 9987654321 11111 23
Q ss_pred CCCceeccCCCccccccccCCc-cccCCCEEEEecceeeCcEEeceEEEEeecCCCCHHHHHHHHHHHHHHHHHHHhccc
Q psy247 204 AYPPVVASGDNANVIHYVHNNQ-KCCHGDLLLMDAGCELNGYDSDITRTWPISGQFTDHQKVLYEIVLDTQLKLLKLCEK 282 (413)
Q Consensus 204 ~~~~~v~~g~~~~~~h~~~~~~-~i~~Gd~v~iD~g~~~~GY~aDitRT~~v~G~~~~~~~~~~~~~~~a~~~~~~~lkp 282 (413)
+|++++++|.|++++||.++++ ++++||+|++|+|++|+||++|+||||+ |.++++++++|++++++|+++++++||
T Consensus 213 ~y~~iva~G~naa~~H~~~~~~~~~~~Gd~vliD~Ga~~~GY~sDiTRTf~--g~~~~~~~~ly~~v~~aq~aai~~ikP 290 (443)
T PRK13607 213 PYGNIVALNEHAAVLHYTKLDHQAPAEMRSFLIDAGAEYNGYAADITRTYA--AKEDNDFAALIKDVNKEQLALIATMKP 290 (443)
T ss_pred CCCcEEEecCcceEecCCccCCCCCCCCCEEEEEeeEEECCEEecceEEEe--cCCCHHHHHHHHHHHHHHHHHHHHccC
Confidence 5677777888888888888874 6899999999999999999999999997 678999999999999999999999999
Q ss_pred CCCCHHHHHHHH--HH----HHc--------------Cc--ccccccccccCCCCccCCCCCCCCCCCCCCcceecCCCC
Q psy247 283 SDSALNFIYRYA--YV----FQI--------------GF--KFCPHHSSHYLGMDVHDCAAIPRTIPVAPGVVFTVEPGM 340 (413)
Q Consensus 283 ~G~~~~ei~~~~--~~----~~~--------------g~--~~~~h~~GHgiGl~~~E~p~~~~~~~~~~g~~~~~~pg~ 340 (413)
|+++.||++++ .+ .+. |+ .+++|++||+||+++||.+.+.... .|......++
T Consensus 291 -G~~~~dv~~aa~~~i~~~L~~~Gl~~g~~~~~~~~~g~~~~~f~HglGH~iGldvHd~~~~~~~~---~~~~~~~~~~- 365 (443)
T PRK13607 291 -GVSYVDLHIQMHQRIAKLLRKFQIVTGLSEEAMVEQGITSPFFPHGLGHPLGLQVHDVAGFMQDD---RGTHLAAPEK- 365 (443)
T ss_pred -CCCHHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHhCCCceEecCCCccCccCcccccCCCccccc---cccccccccc-
Confidence 99999999987 12 222 33 4889999999999999987653210 0000000000
Q ss_pred ccccCCCCCCCCCCCCCcEEEeCCeeeEcCC--------------CCCcccccccc-eEEEceeEEEeCCCCcccCCCC
Q psy247 341 DVHDCAAIPRTIPVAPGMVFTVEPGVYISKD--------------CKETRPEFRGM-GIRIEDDILIDKSSNVENLSAM 404 (413)
Q Consensus 341 ~~~~~~~~~~~~~L~~GMv~~iEPgi~~~~~--------------~~~~~~~~~~~-gvriED~vlVt~~G~~e~Lt~~ 404 (413)
.+ ......+|+||||||||||+|+++. +|+..++|+++ ||||||+|+||++|+ ++||+.
T Consensus 366 --~~--~l~~~~~L~~GmV~TvEPGiY~~~~ll~~~~~~~~~~~in~~~i~~~~~~GGvRIED~vlVT~~G~-e~Lt~~ 439 (443)
T PRK13607 366 --HP--YLRCTRVLEPGMVLTIEPGLYFIDSLLAPLREGPFSKHFNWQKIDALKPFGGIRIEDNVVVHENGV-ENMTRD 439 (443)
T ss_pred --cc--ccccCCcCCCCcEEEECCeeeeChhhhchhhhhhhhhhccHHHHHhhcCCCEEeecceEEEcCCCC-eECChh
Confidence 00 1235689999999999999999852 45556677776 899999999999999 999974
No 5
>COG0006 PepP Xaa-Pro aminopeptidase [Amino acid transport and metabolism]
Probab=100.00 E-value=6.1e-57 Score=455.76 Aligned_cols=307 Identities=31% Similarity=0.495 Sum_probs=257.6
Q ss_pred CCcceeeeecCceEEecCCCC----CCEEEEEEcCCCCCceEEEEEeCcchhhhccCC------------Ccc---cHhh
Q psy247 3 EKIPYIFRQNTDFFYFTGCLE----PDSAVVIHGASDENFKSELFVKRKDAKAELWDG------------PRT---GKAQ 63 (413)
Q Consensus 3 ~~~~~~f~q~~n~~YltG~~~----~~~~lv~~~~~~~~~~~~l~v~~~~~~~~~~~~------------~~~---~~~~ 63 (413)
+...+++++++||+||||+.. ....+++..++ +++||++..+.....|.. ... ..+.
T Consensus 25 ~~~~~~~~~~~n~~yltg~~~~~~~~~~~~~~~~~~----~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (384)
T COG0006 25 GLDALLLTSPSNFYYLTGFDAFGFERLQALLVPAEG----EPVLFVRGRDEEAAKETSWIKLENVEVYEDDEDPAAPLDL 100 (384)
T ss_pred CCcEEEecCCCceEEEeCCCCCcccceEEEEEcCCC----ceEEEEcchhHHHHHhhcccccCceEEEecCCccccHHHH
Confidence 455699999999999999984 11344555543 589999998854322211 111 1122
Q ss_pred HhhhcC----------------------------CCCCCcccchHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHhc
Q psy247 64 LNGYVP----------------------------RRKDYSWNVPKQLFHQLRLYKSDSEQEMMRETCRIASEGFKETIGF 115 (413)
Q Consensus 64 ~~~~l~----------------------------~~~~~~~~d~~~~l~~~R~vKs~~Ei~~~r~A~~i~~~~~~~~~~~ 115 (413)
+..++. .++..++++++.++.++|++||+.||+.||+|+++++.++.++++.
T Consensus 101 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~i~~lR~iKs~~EI~~ir~A~~i~~~a~~~~~~~ 180 (384)
T COG0006 101 LGALLEELGLAGKRIGIESASIFLTLAAFERLQAALPRAELVDASDLVDRLRLIKSPAEIAKIRKAAEIADAALEAALEA 180 (384)
T ss_pred HHHHHHhccccccceEEEeccCccCHHHHHHHHhhCCCCEEeccHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 222111 1233478999999999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHHHHHHHHHHcCCCCCCCCceeecCCCccccccccCCcccccCcceecccccCCCCCCHHHHHhhhHHHH
Q psy247 116 SKPGRTEHELFTKFDYEVRMRGAQILAYPPVVASGDNANVIHYVHNNQKCCHGDLLLMDAGFSKPGRTEHELFTKFDYEV 195 (413)
Q Consensus 116 ~~~G~tE~el~~~~~~~~~~~G~~~~~~~~iv~sG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (413)
+++|+||.|+++++++.+++.|++..+|.+|
T Consensus 181 ~~~g~tE~ev~a~l~~~~~~~G~~~~sf~~i------------------------------------------------- 211 (384)
T COG0006 181 IRPGMTEAEIAAELEYALRKGGAEGPSFDTI------------------------------------------------- 211 (384)
T ss_pred ccCCCcHHHHHHHHHHHHHHcCCCccCcCcE-------------------------------------------------
Confidence 9999999999999999999999776555554
Q ss_pred HhhcccccCCCceeccCCCccccccccCCccccCCCEEEEecceeeCcEEeceEEEEeecCCCCHHHHHHHHHHHHHHHH
Q psy247 196 RMRGAQILAYPPVVASGDNANVIHYVHNNQKCCHGDLLLMDAGCELNGYDSDITRTWPISGQFTDHQKVLYEIVLDTQLK 275 (413)
Q Consensus 196 ~~~~~~~~~~~~~v~~g~~~~~~h~~~~~~~i~~Gd~v~iD~g~~~~GY~aDitRT~~v~G~~~~~~~~~~~~~~~a~~~ 275 (413)
+++|.|++.||+.++++++++||+|+||+|+.|+|||+|+||||++ |+|+++|+++|+.|+++|++
T Consensus 212 -------------v~~G~n~a~pH~~~~~~~~~~gd~vliD~G~~~~gY~sDiTRT~~~-G~~~~~~~~iy~~V~~aq~a 277 (384)
T COG0006 212 -------------VASGENAALPHYTPSDRKLRDGDLVLIDLGGVYNGYCSDITRTFPI-GKPSDEQREIYEAVLEAQEA 277 (384)
T ss_pred -------------EeccccccCcCCCCCcccccCCCEEEEEeeeEECCccccceeEEec-CCCCHHHHHHHHHHHHHHHH
Confidence 5555566677888888889999999999999999999999999999 89999999999999999999
Q ss_pred HHHhcccCCCCHHHHHHHH--HHHHcCc-ccccccccccCC--CCccCCCC-CCCCCCCCCCcceecCCCCccccCCCCC
Q psy247 276 LLKLCEKSDSALNFIYRYA--YVFQIGF-KFCPHHSSHYLG--MDVHDCAA-IPRTIPVAPGVVFTVEPGMDVHDCAAIP 349 (413)
Q Consensus 276 ~~~~lkp~G~~~~ei~~~~--~~~~~g~-~~~~h~~GHgiG--l~~~E~p~-~~~~~~~~~g~~~~~~pg~~~~~~~~~~ 349 (413)
+++++|| |+++++|+.++ .+.+.|+ .++.|++||++| +++||.|. +. .+
T Consensus 278 a~~~~rp-G~~~~~vd~~ar~~i~~~g~~~~~~h~~GHgvG~~l~vhE~p~~~~------------------------~~ 332 (384)
T COG0006 278 AIAAIRP-GVTGGEVDAAARQVLEKAGYGLYFLHGTGHGVGFVLDVHEHPQYLS------------------------PG 332 (384)
T ss_pred HHHHhCC-CCcHHHHHHHHHHHHHhcCCcccccCCccccCCCCcccCcCccccC------------------------CC
Confidence 9999999 99999999999 7788888 688999999999 99999995 32 34
Q ss_pred CCCCCCCCcEEEeCCeeeEcCCCCCcccccccceEEEceeEEEeCCCCcccCCCCCCCCccccC
Q psy247 350 RTIPVAPGMVFTVEPGVYISKDCKETRPEFRGMGIRIEDDILIDKSSNVENLSAMCPKNIDEIE 413 (413)
Q Consensus 350 ~~~~L~~GMv~~iEPgi~~~~~~~~~~~~~~~~gvriED~vlVt~~G~~e~Lt~~~p~~~~~ie 413 (413)
+..+|+|||||++|||+|.++. +||||||+|+||++|+ |+||. .|+++..++
T Consensus 333 ~~~~L~~GMv~t~Epg~y~~g~----------~GirIEd~vlVte~G~-e~LT~-~~~~~~~~~ 384 (384)
T COG0006 333 SDTTLEPGMVFSIEPGIYIPGG----------GGVRIEDTVLVTEDGF-EVLTR-VPKELLVIE 384 (384)
T ss_pred CCccccCCcEEEeccccccCCC----------ceEEEEEEEEEcCCCc-eeccc-CCcceeecC
Confidence 6899999999999999999987 8999999999999999 99995 899988764
No 6
>PRK09795 aminopeptidase; Provisional
Probab=100.00 E-value=3.5e-55 Score=439.41 Aligned_cols=298 Identities=25% Similarity=0.382 Sum_probs=242.7
Q ss_pred eeeeecCceEEecCCCCCCEEEEEEcCCCCCceEEEEEeCcchhh---hccCC------Cccc-HhhHhhhcC-------
Q psy247 7 YIFRQNTDFFYFTGCLEPDSAVVIHGASDENFKSELFVKRKDAKA---ELWDG------PRTG-KAQLNGYVP------- 69 (413)
Q Consensus 7 ~~f~q~~n~~YltG~~~~~~~lv~~~~~~~~~~~~l~v~~~~~~~---~~~~~------~~~~-~~~~~~~l~------- 69 (413)
+....+.|++|||||....+.++|+.++ .+||++.++... +.+.. .... .+.+.++++
T Consensus 19 ~lI~~~~n~~YLTGf~g~~g~llIt~~~-----~~l~td~ry~~qa~~~~~~~~v~~~~~~~~~~~~L~~~L~~~~~~~I 93 (361)
T PRK09795 19 VLLSSRQNKQPHLGISTGSGYVVISRES-----AHILVDSRYYADVEARAQGYQLHLLDATNTLTTIVNQIIADEQLQTL 93 (361)
T ss_pred EEECCccccccccCccCCCeEEEEECCC-----CEEEcCcchHHHHHhhCCCceEEEecCCccHHHHHHHHHHhcCCcEE
Confidence 5666778999999998767777877653 567777765331 11110 0001 112222221
Q ss_pred -----------------CCCCCcccchHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHhccCCCCCHHHHHHHHHHH
Q psy247 70 -----------------RRKDYSWNVPKQLFHQLRLYKSDSEQEMMRETCRIASEGFKETIGFSKPGRTEHELFTKFDYE 132 (413)
Q Consensus 70 -----------------~~~~~~~~d~~~~l~~~R~vKs~~Ei~~~r~A~~i~~~~~~~~~~~~~~G~tE~el~~~~~~~ 132 (413)
.+ ..++++. .+..+|+|||++||++||+|++|+++++..+.+.++||+||.||++.+++.
T Consensus 94 g~e~~~~s~~~~~~L~~~l-~~~~~~~--~~~~lR~iKs~~Ei~~~r~a~~i~~~~~~~~~~~i~~G~tE~e~~~~~~~~ 170 (361)
T PRK09795 94 GFEGQQVSWETAHRWQSEL-NAKLVSA--TPDVLRQIKTPEEVEKIRLACGIADRGAEHIRRFIQAGMSEREIAAELEWF 170 (361)
T ss_pred EEecCcccHHHHHHHHHhc-Ccccccc--cHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHH
Confidence 11 2334444 379999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCCCCCCCceeecCCCccccccccCCcccccCcceecccccCCCCCCHHHHHhhhHHHHHhhcccccCCCceeccC
Q psy247 133 VRMRGAQILAYPPVVASGDNANVIHYVHNNQKCCHGDLLLMDAGFSKPGRTEHELFTKFDYEVRMRGAQILAYPPVVASG 212 (413)
Q Consensus 133 ~~~~G~~~~~~~~iv~sG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g 212 (413)
++++|++..+|++||+||
T Consensus 171 ~~~~G~~~~~f~~iv~sG-------------------------------------------------------------- 188 (361)
T PRK09795 171 MRQQGAEKASFDTIVASG-------------------------------------------------------------- 188 (361)
T ss_pred HHHCCCCcCCCCeEEEEe--------------------------------------------------------------
Confidence 999998866665555555
Q ss_pred CCccccccccCCccccCCCEEEEecceeeCcEEeceEEEEeecCC-CCHH---HHHHHHHHHHHHHHHHHhcccCCCCHH
Q psy247 213 DNANVIHYVHNNQKCCHGDLLLMDAGCELNGYDSDITRTWPISGQ-FTDH---QKVLYEIVLDTQLKLLKLCEKSDSALN 288 (413)
Q Consensus 213 ~~~~~~h~~~~~~~i~~Gd~v~iD~g~~~~GY~aDitRT~~v~G~-~~~~---~~~~~~~~~~a~~~~~~~lkp~G~~~~ 288 (413)
.|++.||+.|++++|++||+|++|+|+.|+||++|+||||+++|+ ++++ ++++|+.++++|+++++++|| |++++
T Consensus 189 ~~~~~ph~~~~~~~l~~gd~v~~d~g~~~~gY~sd~tRt~~~g~~~~~~~~~~~~~~~~~v~~a~~~~~~~~rp-G~~~~ 267 (361)
T PRK09795 189 WRGALPHGKASDKIVAAGEFVTLDFGALYQGYCSDMTRTLLVNGEGVSAESHPLFNVYQIVLQAQLAAISAIRP-GVRCQ 267 (361)
T ss_pred ccccccCCCCCCceecCCCEEEEEeccccCCEeecceEEEEeCCcCCchhHHHHHHHHHHHHHHHHHHHHHcCC-CCcHH
Confidence 455567777888889999999999999999999999999999543 3333 789999999999999999999 99999
Q ss_pred HHHHHH--HHHHcCc-ccccccccccCCCCccCCCCCCCCCCCCCCcceecCCCCccccCCCCCCCCCCCCCcEEEeCCe
Q psy247 289 FIYRYA--YVFQIGF-KFCPHHSSHYLGMDVHDCAAIPRTIPVAPGVVFTVEPGMDVHDCAAIPRTIPVAPGMVFTVEPG 365 (413)
Q Consensus 289 ei~~~~--~~~~~g~-~~~~h~~GHgiGl~~~E~p~~~~~~~~~~g~~~~~~pg~~~~~~~~~~~~~~L~~GMv~~iEPg 365 (413)
||++++ .+.+.|+ .++.|++||+||+++||.|.+. .+++.+|+|||||+|||+
T Consensus 268 ~v~~~~~~~~~~~g~~~~~~h~~GHgiGl~~he~p~i~------------------------~~~~~~l~~gmv~~iEpg 323 (361)
T PRK09795 268 QVDDAARRVITEAGYGDYFGHNTGHAIGIEVHEDPRFS------------------------PRDTTTLQPGMLLTVEPG 323 (361)
T ss_pred HHHHHHHHHHHHcCCCccCCCCCCccCCccccCCCCcC------------------------CCCCCCcCCCCEEEECCE
Confidence 999999 7788898 6899999999999999999864 346799999999999999
Q ss_pred eeEcCCCCCcccccccceEEEceeEEEeCCCCcccCCCCCCCCccc
Q psy247 366 VYISKDCKETRPEFRGMGIRIEDDILIDKSSNVENLSAMCPKNIDE 411 (413)
Q Consensus 366 i~~~~~~~~~~~~~~~~gvriED~vlVt~~G~~e~Lt~~~p~~~~~ 411 (413)
+|+++. +|+||||+|+||++|+ |+||+ +|+++..
T Consensus 324 iy~~~~----------~gvriEd~v~vt~~G~-e~Lt~-~~~~l~~ 357 (361)
T PRK09795 324 IYLPGQ----------GGVRIEDVVLVTPQGA-EVLYA-MPKTVLL 357 (361)
T ss_pred EEeCCC----------CEEEEeeEEEECCCCc-EeCcC-CCceEEE
Confidence 999886 7999999999999999 99998 7998753
No 7
>TIGR02993 ectoine_eutD ectoine utilization protein EutD. Members of this family are putative peptidases or hydrolases similar to Xaa-Pro aminopeptidase (pfam00557). They belong to ectoine utilization operons, as found in Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. The exact function is unknown.
Probab=100.00 E-value=4.8e-52 Score=420.57 Aligned_cols=309 Identities=17% Similarity=0.208 Sum_probs=242.1
Q ss_pred eeeeecCceEEecCCCCCC----EEEEEEcCCCCCceEEEEEeCcchh---hhcc---------CC--------------
Q psy247 7 YIFRQNTDFFYFTGCLEPD----SAVVIHGASDENFKSELFVKRKDAK---AELW---------DG-------------- 56 (413)
Q Consensus 7 ~~f~q~~n~~YltG~~~~~----~~lv~~~~~~~~~~~~l~v~~~~~~---~~~~---------~~-------------- 56 (413)
..+.+++|++||||+.... .+|+|+.++ +++|+++..+.. ...| ..
T Consensus 30 lli~~~~ni~YltG~~~~~~~~~~~l~v~~~~----~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 105 (391)
T TIGR02993 30 LIVTDPSNMAWLTGYDGWSFYVHQCVLLPPEG----EPIWYGRGQDANGAKRTAFMDHDNIVGYPDHYVQSTERHPMDYL 105 (391)
T ss_pred EEEcCcccceeeccCCCCceEEEEEEEEcCCC----ceEEEehhhhhhhHhheeeccccceeecccccccCCCCCHHHHH
Confidence 5667789999999998533 356666554 567777655321 1111 10
Q ss_pred -----------CcccHh---------hHhhhcCCCCCCcccchHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHhcc
Q psy247 57 -----------PRTGKA---------QLNGYVPRRKDYSWNVPKQLFHQLRLYKSDSEQEMMRETCRIASEGFKETIGFS 116 (413)
Q Consensus 57 -----------~~~~~~---------~~~~~l~~~~~~~~~d~~~~l~~~R~vKs~~Ei~~~r~A~~i~~~~~~~~~~~~ 116 (413)
.+++++ .+..+...+++++++|+++++.++|+|||++||++||+|++|+++++.++.+.+
T Consensus 106 ~~~l~~~g~~~~~ig~e~~~~~~~~~~~~~l~~~l~~~~~~d~~~~~~~lR~iKs~~EI~~lr~A~~i~~~~~~~~~~~i 185 (391)
T TIGR02993 106 SEILQDRGWDSLTIGVEMDNYYFSAAAFASLQKHLPNARFVDATALVNWQRAVKSETEISYMRVAARIVEKMHQRIFERI 185 (391)
T ss_pred HHHHHhcCCCCCcEEEecCCCccCHHHHHHHHHhCCCCEEEehHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 012221 122233334678899999999999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHcCCCCCCCCceeecCCCccccccccCCcccccCcceecccccCCCCCCHHHHHhhhHHHHH
Q psy247 117 KPGRTEHELFTKFDYEVRMRGAQILAYPPVVASGDNANVIHYVHNNQKCCHGDLLLMDAGFSKPGRTEHELFTKFDYEVR 196 (413)
Q Consensus 117 ~~G~tE~el~~~~~~~~~~~G~~~~~~~~iv~sG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (413)
+||+||.||++++.+...+ +...
T Consensus 186 ~pG~tE~ei~~~~~~~~~~-~~~~-------------------------------------------------------- 208 (391)
T TIGR02993 186 EPGMRKCDLVADIYDAGIR-GVDG-------------------------------------------------------- 208 (391)
T ss_pred cCCCCHHHHHHHHHHhhhh-cccC--------------------------------------------------------
Confidence 9999999999887644221 1100
Q ss_pred hhcccccCCCceeccCCCccccccccCCccccCCCEEEEecceeeCcEEeceEEEEeecCCCCHHHHHHHHHHHHHHHHH
Q psy247 197 MRGAQILAYPPVVASGDNANVIHYVHNNQKCCHGDLLLMDAGCELNGYDSDITRTWPISGQFTDHQKVLYEIVLDTQLKL 276 (413)
Q Consensus 197 ~~~~~~~~~~~~v~~g~~~~~~h~~~~~~~i~~Gd~v~iD~g~~~~GY~aDitRT~~v~G~~~~~~~~~~~~~~~a~~~~ 276 (413)
.|..+.+|.+++++|.|++.+|+.|+++++++||+|++|+|+.|+||++|++||+++ |+|+++|+++|+.++++|+++
T Consensus 209 -~g~~~~~~~~iv~sG~~~a~pH~~~~~~~l~~gd~v~iD~g~~~~GY~sD~tRT~~v-G~p~~~~~~~~~~~~~a~~~~ 286 (391)
T TIGR02993 209 -FGGDYPAIVPLLPSGADASAPHLTWDDSPMKVGEGTFFEIAGCYKRYHCPLSRTVFL-GKPTQAFLDAEKAVLEGMEAG 286 (391)
T ss_pred -cCCCcCCcccccccCccccCCCCCCCCCcccCCCEEEEEeeeecccCccceeEEEEc-CCCCHHHHHHHHHHHHHHHHH
Confidence 011123455677788888899999999999999999999999999999999999999 999999999999999999999
Q ss_pred HHhcccCCCCHHHHHHHH--HHHHcCcccccccccccCCCCccCCCCCCCCCCCCCCcceecCCCCccccCCCCCCCCCC
Q psy247 277 LKLCEKSDSALNFIYRYA--YVFQIGFKFCPHHSSHYLGMDVHDCAAIPRTIPVAPGVVFTVEPGMDVHDCAAIPRTIPV 354 (413)
Q Consensus 277 ~~~lkp~G~~~~ei~~~~--~~~~~g~~~~~h~~GHgiGl~~~E~p~~~~~~~~~~g~~~~~~pg~~~~~~~~~~~~~~L 354 (413)
++++|| |++++||++++ .+.+.|+.. .|++|||||+++|+.+.-. . | .+. .+++.+|
T Consensus 287 i~~ikp-G~~~~dv~~~~~~~~~~~G~~~-~h~~GhgiGl~~~~~~~e~-~----~----~l~----------~~~~~~L 345 (391)
T TIGR02993 287 LEAAKP-GNTCEDIANAFFAVLKKYGIHK-DSRTGYPIGLSYPPDWGER-T----M----SLR----------PGDNTVL 345 (391)
T ss_pred HHHcCC-CCcHHHHHHHHHHHHHHcCCcc-CCCceeeeccCcCCCCCCc-c----c----ccc----------CCCCcee
Confidence 999999 99999999998 677888743 5999999999986432100 0 0 000 3467899
Q ss_pred CCCcEEEeCCeeeEcCCCCCcccccccceEEEceeEEEeCCCCcccCCCCCCCCcccc
Q psy247 355 APGMVFTVEPGVYISKDCKETRPEFRGMGIRIEDDILIDKSSNVENLSAMCPKNIDEI 412 (413)
Q Consensus 355 ~~GMv~~iEPgi~~~~~~~~~~~~~~~~gvriED~vlVt~~G~~e~Lt~~~p~~~~~i 412 (413)
++||||+|||++|+++ +|+||||+|+||++|+ |+||. +|+++..+
T Consensus 346 ~~GMv~tvEpgiy~~~-----------~Gvried~v~VT~~G~-e~Lt~-~p~~l~~~ 390 (391)
T TIGR02993 346 KPGMTFHFMTGLWMED-----------WGLEITESILITETGV-ECLSS-VPRKLFVK 390 (391)
T ss_pred cCCCEEEEcceeEeCC-----------CCeEEeeEEEECCCcc-eeccc-CCcccEeC
Confidence 9999999999999875 5899999999999999 99998 79998653
No 8
>PRK14575 putative peptidase; Provisional
Probab=100.00 E-value=3.4e-51 Score=415.96 Aligned_cols=240 Identities=23% Similarity=0.389 Sum_probs=214.5
Q ss_pred CCCCcccchHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHhccCCCCCHHHHHHHHHHHHHHcCCCCCCCCceeecC
Q psy247 71 RKDYSWNVPKQLFHQLRLYKSDSEQEMMRETCRIASEGFKETIGFSKPGRTEHELFTKFDYEVRMRGAQILAYPPVVASG 150 (413)
Q Consensus 71 ~~~~~~~d~~~~l~~~R~vKs~~Ei~~~r~A~~i~~~~~~~~~~~~~~G~tE~el~~~~~~~~~~~G~~~~~~~~iv~sG 150 (413)
+|+++++|+++++.++|+|||++||++||+|+++++++++++++.++||+||.||++.+.+.+.+.|.....+.+++
T Consensus 160 lp~~~~~d~~~~l~~lR~iKs~~EI~~~r~A~~i~~~a~~~~~~~i~pG~tE~elaa~~~~~~~~~g~~~~~~~~~v--- 236 (406)
T PRK14575 160 MPNVDFVDSSSIFNELRVIKSPWEIKRLRKSAEITEYGITEASKLIRVGCTSAELTAAYKAAVMSKSETHFSRFHLI--- 236 (406)
T ss_pred CCCCeEEEcHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHcCCCcCCcCceE---
Confidence 46778999999999999999999999999999999999999999999999999999999988887775533322333
Q ss_pred CCccccccccCCcccccCcceecccccCCCCCCHHHHHhhhHHHHHhhcccccCCCceeccCCCccccccccCCccccCC
Q psy247 151 DNANVIHYVHNNQKCCHGDLLLMDAGFSKPGRTEHELFTKFDYEVRMRGAQILAYPPVVASGDNANVIHYVHNNQKCCHG 230 (413)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g~~~~~~h~~~~~~~i~~G 230 (413)
.+|.+ ..+|+.|+++++++|
T Consensus 237 -----------------------------------------------------------~~G~~-~~~h~~~~~~~l~~G 256 (406)
T PRK14575 237 -----------------------------------------------------------SVGAD-FSPKLIPSNTKACSG 256 (406)
T ss_pred -----------------------------------------------------------EECCC-cccCCCCCCCcCCCC
Confidence 34444 346888899999999
Q ss_pred CEEEEecceeeCcEEeceEEEEeecCCCCHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHH--HHHHcCc-cccccc
Q psy247 231 DLLLMDAGCELNGYDSDITRTWPISGQFTDHQKVLYEIVLDTQLKLLKLCEKSDSALNFIYRYA--YVFQIGF-KFCPHH 307 (413)
Q Consensus 231 d~v~iD~g~~~~GY~aDitRT~~v~G~~~~~~~~~~~~~~~a~~~~~~~lkp~G~~~~ei~~~~--~~~~~g~-~~~~h~ 307 (413)
|+|++|+|+.|+||++|++|||++ |+|+++|+++|+.++++++++++++|| |++++||++++ .+.+.|+ +++.|+
T Consensus 257 d~v~iD~g~~~~GY~sditRT~~v-G~~~~~~~~~~~~~~~a~~~~~~~~rp-G~~~~dv~~a~~~~~~~~G~~~~~~~~ 334 (406)
T PRK14575 257 DLIKFDCGVDVDGYGADIARTFVV-GEPPEITRKIYQTIRTGHEHMLSMVAP-GVKMKDVFDSTMEVIKKSGLPNYNRGH 334 (406)
T ss_pred CEEEEEeceEECCEeeeeEEEEEC-CCCCHHHHHHHHHHHHHHHHHHHHcCC-CCcHHHHHHHHHHHHHHcCCccccCCC
Confidence 999999999999999999999999 999999999999999999999999999 99999999999 7778898 578899
Q ss_pred ccccCC--CCccCCCCCCCCCCCCCCcceecCCCCccccCCCCCCCCCCCCCcEEEeCCeeeEcCCCCCcccccccceEE
Q psy247 308 SSHYLG--MDVHDCAAIPRTIPVAPGVVFTVEPGMDVHDCAAIPRTIPVAPGMVFTVEPGVYISKDCKETRPEFRGMGIR 385 (413)
Q Consensus 308 ~GHgiG--l~~~E~p~~~~~~~~~~g~~~~~~pg~~~~~~~~~~~~~~L~~GMv~~iEPgi~~~~~~~~~~~~~~~~gvr 385 (413)
+|||+| +.+||.|.+. .+++.+|+|||||++||++|.++. +|+|
T Consensus 335 ~GHGiG~~lg~~e~P~i~------------------------~~~~~~Le~GMv~tiEpgiy~~g~----------gGvr 380 (406)
T PRK14575 335 LGHGNGVFLGLEESPFVS------------------------THATESFTSGMVLSLETPYYGYNL----------GSIM 380 (406)
T ss_pred CCCcccCCCCCccCCCCC------------------------CCCCCCcCCCCEEEECCeeecCCC----------cEEE
Confidence 999999 5899999864 245789999999999999998875 6899
Q ss_pred EceeEEEeCCCCcccCCCCCCCCccc
Q psy247 386 IEDDILIDKSSNVENLSAMCPKNIDE 411 (413)
Q Consensus 386 iED~vlVt~~G~~e~Lt~~~p~~~~~ 411 (413)
+||+|+||++|+ |+||+ +|+++..
T Consensus 381 iEDtvlVT~~G~-e~LT~-~p~~l~~ 404 (406)
T PRK14575 381 IEDMILINKEGI-EFLSK-LPRDLVS 404 (406)
T ss_pred EEeEEEEcCCCc-ccCCC-CCccccc
Confidence 999999999999 99998 7998864
No 9
>PRK14576 putative endopeptidase; Provisional
Probab=100.00 E-value=6.3e-50 Score=406.53 Aligned_cols=241 Identities=22% Similarity=0.328 Sum_probs=215.8
Q ss_pred CCCCCcccchHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHhccCCCCCHHHHHHHHHHHHHHcCCCCCCCCceeec
Q psy247 70 RRKDYSWNVPKQLFHQLRLYKSDSEQEMMRETCRIASEGFKETIGFSKPGRTEHELFTKFDYEVRMRGAQILAYPPVVAS 149 (413)
Q Consensus 70 ~~~~~~~~d~~~~l~~~R~vKs~~Ei~~~r~A~~i~~~~~~~~~~~~~~G~tE~el~~~~~~~~~~~G~~~~~~~~iv~s 149 (413)
.+|+.+++|+++++.++|+|||++||++||+|++++++++.++++.++||+||.||++.+.+.+.+.|.....+.++
T Consensus 158 ~~~~~~~vd~~~~l~~lR~iKs~~EI~~~r~A~~i~~~~~~~~~~~i~pG~tE~elaa~~~~~~~~~g~~~~~~~~~--- 234 (405)
T PRK14576 158 VAPGLKLVDSTALFNEIRMIKSPWEIEHLRKSAEITEYGIASAAKKIRVGCTAAELTAAFKAAVMSFPETNFSRFNL--- 234 (405)
T ss_pred hCCCCeEEEcHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHcCCCcCCCCCE---
Confidence 34678899999999999999999999999999999999999999999999999999999999998877543332234
Q ss_pred CCCccccccccCCcccccCcceecccccCCCCCCHHHHHhhhHHHHHhhcccccCCCceeccCCCccccccccCCccccC
Q psy247 150 GDNANVIHYVHNNQKCCHGDLLLMDAGFSKPGRTEHELFTKFDYEVRMRGAQILAYPPVVASGDNANVIHYVHNNQKCCH 229 (413)
Q Consensus 150 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g~~~~~~h~~~~~~~i~~ 229 (413)
+++|.+ +.+|+.|+++++++
T Consensus 235 -----------------------------------------------------------v~~G~~-~~~h~~~~~~~l~~ 254 (405)
T PRK14576 235 -----------------------------------------------------------ISVGDN-FSPKIIADTTPAKV 254 (405)
T ss_pred -----------------------------------------------------------EEECCc-ccCCCCCCCcccCC
Confidence 444555 34688888999999
Q ss_pred CCEEEEecceeeCcEEeceEEEEeecCCCCHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHH--HHHHcCc-ccccc
Q psy247 230 GDLLLMDAGCELNGYDSDITRTWPISGQFTDHQKVLYEIVLDTQLKLLKLCEKSDSALNFIYRYA--YVFQIGF-KFCPH 306 (413)
Q Consensus 230 Gd~v~iD~g~~~~GY~aDitRT~~v~G~~~~~~~~~~~~~~~a~~~~~~~lkp~G~~~~ei~~~~--~~~~~g~-~~~~h 306 (413)
||+|++|+|+.|+||++|++|||++ |+|+++|+++|+.++++++++++++|| |++++||++++ .+.+.|+ .++.|
T Consensus 255 Gd~v~~d~g~~~~GY~sd~tRT~~~-G~p~~~~~~~~~~~~~a~~a~~~~~rP-G~~~~dv~~a~~~~~~~~G~~~~~~~ 332 (405)
T PRK14576 255 GDLIKFDCGIDVAGYGADLARTFVL-GEPDKLTQQIYDTIRTGHEHMLSMVAP-GVKLKAVFDSTMAVIKTSGLPHYNRG 332 (405)
T ss_pred CCEEEEEeceeECCEEeeeeEEEEC-CCCCHHHHHHHHHHHHHHHHHHHHcCC-CCcHHHHHHHHHHHHHHcCCccccCC
Confidence 9999999999999999999999999 999999999999999999999999999 99999999998 7788898 57889
Q ss_pred cccccCC--CCccCCCCCCCCCCCCCCcceecCCCCccccCCCCCCCCCCCCCcEEEeCCeeeEcCCCCCcccccccceE
Q psy247 307 HSSHYLG--MDVHDCAAIPRTIPVAPGVVFTVEPGMDVHDCAAIPRTIPVAPGMVFTVEPGVYISKDCKETRPEFRGMGI 384 (413)
Q Consensus 307 ~~GHgiG--l~~~E~p~~~~~~~~~~g~~~~~~pg~~~~~~~~~~~~~~L~~GMv~~iEPgi~~~~~~~~~~~~~~~~gv 384 (413)
++|||+| +.+||.|.+. .+++.+|++||||++||++|.++. +|+
T Consensus 333 ~~GHgiG~~l~~~e~P~i~------------------------~~~~~~Le~GMv~~vEp~~y~~g~----------ggv 378 (405)
T PRK14576 333 HLGHGDGVFLGLEEVPFVS------------------------TQATETFCPGMVLSLETPYYGIGV----------GSI 378 (405)
T ss_pred CCCCCCCCCCCcCcCCCcC------------------------CCCCCccCCCCEEEECCceeecCC----------CEE
Confidence 9999999 8899999753 245789999999999999999875 699
Q ss_pred EEceeEEEeCCCCcccCCCCCCCCccc
Q psy247 385 RIEDDILIDKSSNVENLSAMCPKNIDE 411 (413)
Q Consensus 385 riED~vlVt~~G~~e~Lt~~~p~~~~~ 411 (413)
|+||+|+||++|+ |+||+ +|+++..
T Consensus 379 riEDtvlVTe~G~-e~LT~-~p~~l~~ 403 (405)
T PRK14576 379 MLEDMILITDSGF-EFLSK-LDRDLRR 403 (405)
T ss_pred EEeeEEEECCCcc-ccCCC-CCccccc
Confidence 9999999999999 99999 7998864
No 10
>PRK15173 peptidase; Provisional
Probab=100.00 E-value=6.5e-50 Score=394.83 Aligned_cols=258 Identities=21% Similarity=0.338 Sum_probs=223.3
Q ss_pred cCCCcccHh-------hHhhhcCCCCCCcccchHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHhccCCCCCHHHHH
Q psy247 54 WDGPRTGKA-------QLNGYVPRRKDYSWNVPKQLFHQLRLYKSDSEQEMMRETCRIASEGFKETIGFSKPGRTEHELF 126 (413)
Q Consensus 54 ~~~~~~~~~-------~~~~~l~~~~~~~~~d~~~~l~~~R~vKs~~Ei~~~r~A~~i~~~~~~~~~~~~~~G~tE~el~ 126 (413)
|...++++| .+..+.+.+|+++++|++.++.++|+|||++||++||+|++++++++..+.+.+++|+||.||+
T Consensus 53 ~~~~rigve~~~~~~~~~~~l~~~l~~~~~~d~~~~i~~lR~iKs~~EI~~mr~A~~i~~~~~~~~~~~i~~G~tE~el~ 132 (323)
T PRK15173 53 VLNKKIAIDLNIMSNGGKRVIDAVMPNVDFVDSSSIFNELRVIKSPWEIKRLRKSAEITEYGITEASKLIRVGCTSAELT 132 (323)
T ss_pred ccCCEEEEecCccCHHHHHHHHhhCCCCeEEEhHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCCHHHHH
Confidence 344566665 2444445567889999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCCCCceeecCCCccccccccCCcccccCcceecccccCCCCCCHHHHHhhhHHHHHhhcccccCCC
Q psy247 127 TKFDYEVRMRGAQILAYPPVVASGDNANVIHYVHNNQKCCHGDLLLMDAGFSKPGRTEHELFTKFDYEVRMRGAQILAYP 206 (413)
Q Consensus 127 ~~~~~~~~~~G~~~~~~~~iv~sG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (413)
+.+.+.+.+.|.....+.++++
T Consensus 133 a~~~~~~~~~g~~~~~~~~~i~---------------------------------------------------------- 154 (323)
T PRK15173 133 AAYKAAVMSKSETHFSRFHLIS---------------------------------------------------------- 154 (323)
T ss_pred HHHHHHHHHcCCCCCCCCcEEE----------------------------------------------------------
Confidence 9998888877654333333333
Q ss_pred ceeccCCCccccccccCCccccCCCEEEEecceeeCcEEeceEEEEeecCCCCHHHHHHHHHHHHHHHHHHHhcccCCCC
Q psy247 207 PVVASGDNANVIHYVHNNQKCCHGDLLLMDAGCELNGYDSDITRTWPISGQFTDHQKVLYEIVLDTQLKLLKLCEKSDSA 286 (413)
Q Consensus 207 ~~v~~g~~~~~~h~~~~~~~i~~Gd~v~iD~g~~~~GY~aDitRT~~v~G~~~~~~~~~~~~~~~a~~~~~~~lkp~G~~ 286 (413)
+|.+ ..+|+.++++++++||+|++|+|+.|+||++|++|||++ |+|+++|+++|+.++++++++++++|| |++
T Consensus 155 ----~G~~-~~~h~~~~~~~l~~Gd~V~iD~g~~~~GY~aDitRT~~v-G~p~~~~~~~y~~v~ea~~~~~~~irP-G~~ 227 (323)
T PRK15173 155 ----VGAD-FSPKLIPSNTKACSGDLIKFDCGVDVDGYGADIARTFVV-GEPPEITRKIYQTIRTGHEHMLSMVAP-GVK 227 (323)
T ss_pred ----ECCC-CccCCCCCCCccCCCCEEEEEeCccCCCEeeeeEEEEEc-CCCCHHHHHHHHHHHHHHHHHHHHcCC-CCc
Confidence 3443 246888889999999999999999999999999999999 999999999999999999999999999 999
Q ss_pred HHHHHHHH--HHHHcCc-ccccccccccCCC--CccCCCCCCCCCCCCCCcceecCCCCccccCCCCCCCCCCCCCcEEE
Q psy247 287 LNFIYRYA--YVFQIGF-KFCPHHSSHYLGM--DVHDCAAIPRTIPVAPGVVFTVEPGMDVHDCAAIPRTIPVAPGMVFT 361 (413)
Q Consensus 287 ~~ei~~~~--~~~~~g~-~~~~h~~GHgiGl--~~~E~p~~~~~~~~~~g~~~~~~pg~~~~~~~~~~~~~~L~~GMv~~ 361 (413)
+++|++++ .+.+.|+ .++.|++|||+|+ .+||.|.+. ..++.+|++||||+
T Consensus 228 ~~dv~~a~~~~~~~~G~~~~~~~~~GHGiG~~lg~~E~P~i~------------------------~~~~~~Le~GMV~t 283 (323)
T PRK15173 228 MKDVFDSTMEVIKKSGLPNYNRGHLGHGNGVFLGLEESPFVS------------------------THATESFTSGMVLS 283 (323)
T ss_pred HHHHHHHHHHHHHHcCCccccCCCCCCcCCCCCCcCCCCCCC------------------------CCCCCccCCCCEEE
Confidence 99999998 7788888 5788999999995 899999864 23578999999999
Q ss_pred eCCeeeEcCCCCCcccccccceEEEceeEEEeCCCCcccCCCCCCCCcccc
Q psy247 362 VEPGVYISKDCKETRPEFRGMGIRIEDDILIDKSSNVENLSAMCPKNIDEI 412 (413)
Q Consensus 362 iEPgi~~~~~~~~~~~~~~~~gvriED~vlVt~~G~~e~Lt~~~p~~~~~i 412 (413)
|||++|.++. +|+|+||+|+||++|+ |+||+ +|+++..+
T Consensus 284 iEPgiy~~g~----------ggvriEDtvlVTe~G~-e~LT~-~p~~l~~~ 322 (323)
T PRK15173 284 LETPYYGYNL----------GSIMIEDMILINKEGI-EFLSK-LPRDLVSF 322 (323)
T ss_pred ECCEEEcCCC----------cEEEEeeEEEEcCCcc-eeCCC-CCccceec
Confidence 9999998875 6899999999999999 99998 79998653
No 11
>PRK12897 methionine aminopeptidase; Reviewed
Probab=100.00 E-value=1.2e-48 Score=372.77 Aligned_cols=236 Identities=22% Similarity=0.268 Sum_probs=207.2
Q ss_pred ccCCHHHHHHHHHHHHHHHHHHHHHHhccCCCCCHHHHHHHHHHHHHHcCCCCCCCCceeecCCCccccccccCCccccc
Q psy247 88 LYKSDSEQEMMRETCRIASEGFKETIGFSKPGRTEHELFTKFDYEVRMRGAQILAYPPVVASGDNANVIHYVHNNQKCCH 167 (413)
Q Consensus 88 ~vKs~~Ei~~~r~A~~i~~~~~~~~~~~~~~G~tE~el~~~~~~~~~~~G~~~~~~~~iv~sG~~~~~~~~~~~~~~~~~ 167 (413)
.|||++||++||+|+++++++++++++.++||+||.||++.+.+.++++|++...
T Consensus 3 ~iKs~~EI~~~r~A~~i~~~~~~~~~~~~~~G~tE~el~~~~~~~~~~~G~~~~~------------------------- 57 (248)
T PRK12897 3 TIKTKNEIDLMHESGKLLASCHREIAKIMKPGITTKEINTFVEAYLEKHGATSEQ------------------------- 57 (248)
T ss_pred eeCCHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccc-------------------------
Confidence 6999999999999999999999999999999999999999999999999976310
Q ss_pred CcceecccccCCCCCCHHHHHhhhHHHHHhhcccccCCCceeccCCCccccccccCCccccCCCEEEEecceeeCcEEec
Q psy247 168 GDLLLMDAGFSKPGRTEHELFTKFDYEVRMRGAQILAYPPVVASGDNANVIHYVHNNQKCCHGDLLLMDAGCELNGYDSD 247 (413)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g~~~~~~h~~~~~~~i~~Gd~v~iD~g~~~~GY~aD 247 (413)
..+.+|++++++|.|++.+|+.|+++++++||+|++|+|+.|+||++|
T Consensus 58 --------------------------------~~~~~~~~~i~~g~n~~~~H~~p~~~~l~~Gd~V~iD~g~~~~GY~sD 105 (248)
T PRK12897 58 --------------------------------KGYNGYPYAICASVNDEMCHAFPADVPLTEGDIVTIDMVVNLNGGLSD 105 (248)
T ss_pred --------------------------------cccCCCCcceEeccCCEeecCCCCCcccCCCCEEEEEeeEEECCEEEE
Confidence 002367888889999999999999999999999999999999999999
Q ss_pred eEEEEeecCCCCHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHH--HHHHcCcccccccccccCCCCccCCCCCCCC
Q psy247 248 ITRTWPISGQFTDHQKVLYEIVLDTQLKLLKLCEKSDSALNFIYRYA--YVFQIGFKFCPHHSSHYLGMDVHDCAAIPRT 325 (413)
Q Consensus 248 itRT~~v~G~~~~~~~~~~~~~~~a~~~~~~~lkp~G~~~~ei~~~~--~~~~~g~~~~~h~~GHgiGl~~~E~p~~~~~ 325 (413)
++|||++ |+|+++|+++|+.++++++++++++|| |++++|+++++ .+.+.|+...+|++||+||+++||.|.+..+
T Consensus 106 ~tRT~~v-G~~s~~~~~~~~~~~~a~~~~i~~~kp-G~~~~dv~~a~~~~~~~~g~~~~~~~~GHgiGl~~hE~P~i~~~ 183 (248)
T PRK12897 106 SAWTYRV-GKVSDEAEKLLLVAENALYKGIDQAVI-GNRVGDIGYAIESYVANEGFSVARDFTGHGIGKEIHEEPAIFHF 183 (248)
T ss_pred EEEEEEc-CCCCHHHHHHHHHHHHHHHHHHHhhcC-CCccchHHHHHHHHHHHcCCccCCCeEECccCCcccCCCccCCC
Confidence 9999999 999999999999999999999999999 99999999998 6778898766899999999999999987532
Q ss_pred CCCCCCcceecCCCCccccCCCCCCCCCCCCCcEEEeCCeeeEcC-------CCCCcccccccceEEEceeEEEeCCCCc
Q psy247 326 IPVAPGVVFTVEPGMDVHDCAAIPRTIPVAPGMVFTVEPGVYISK-------DCKETRPEFRGMGIRIEDDILIDKSSNV 398 (413)
Q Consensus 326 ~~~~~g~~~~~~pg~~~~~~~~~~~~~~L~~GMv~~iEPgi~~~~-------~~~~~~~~~~~~gvriED~vlVt~~G~~ 398 (413)
.. .++..+|+|||||++||++|+.. ++|...+..+.+|+|+||||+||++|+
T Consensus 184 ~~--------------------~~~~~~l~~Gmv~tiEP~~~~~~~~~~~~~~~~~~~~~~g~~g~r~edtv~Vt~~G~- 242 (248)
T PRK12897 184 GK--------------------QGQGPELQEGMVITIEPIVNVGMRYSKVDLNGWTARTMDGKLSAQYEHTIAITKDGP- 242 (248)
T ss_pred CC--------------------CCCCCCcCCCCEEEECCeEecCCCceEECCCCcEEEcCCCCeEeecceEEEEeCCcc-
Confidence 11 24567999999999999999532 234433333346999999999999999
Q ss_pred ccCCC
Q psy247 399 ENLSA 403 (413)
Q Consensus 399 e~Lt~ 403 (413)
|+||+
T Consensus 243 e~lt~ 247 (248)
T PRK12897 243 IILTK 247 (248)
T ss_pred EEeec
Confidence 99996
No 12
>PRK07281 methionine aminopeptidase; Reviewed
Probab=100.00 E-value=9.7e-49 Score=378.84 Aligned_cols=245 Identities=20% Similarity=0.227 Sum_probs=212.3
Q ss_pred HccCCHHHHHHHHHHHHHHHHHHHHHHhccCCCCCHHHHHHHHHHHHHHcCCCCCCCCceeecCCCccccccccCCcccc
Q psy247 87 RLYKSDSEQEMMRETCRIASEGFKETIGFSKPGRTEHELFTKFDYEVRMRGAQILAYPPVVASGDNANVIHYVHNNQKCC 166 (413)
Q Consensus 87 R~vKs~~Ei~~~r~A~~i~~~~~~~~~~~~~~G~tE~el~~~~~~~~~~~G~~~~~~~~iv~sG~~~~~~~~~~~~~~~~ 166 (413)
..+||++||++||+|++|+++++.++.+.++||+||.||++.+.+.+++.|+..... |..
T Consensus 2 ~~iKs~~EI~~mr~A~~i~~~~~~~~~~~i~pG~te~ei~~~~~~~~~~~g~~~~~~------G~~-------------- 61 (286)
T PRK07281 2 ITLKSAREIEAMDRAGDFLASIHIGLRDLIKPGVDMWEVEEYVRRRCKEENVLPLQI------GVD-------------- 61 (286)
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHHHHHHCcCCCcHHHHHHHHHHHHHHcCCccccc------CCC--------------
Confidence 368999999999999999999999999999999999999999999999998642110 100
Q ss_pred cCcceecccccCCCCCCHHHHHhhhHHHHHhhcccccCCCceeccCCCccccccccCCccccCCCEEEEecce-------
Q psy247 167 HGDLLLMDAGFSKPGRTEHELFTKFDYEVRMRGAQILAYPPVVASGDNANVIHYVHNNQKCCHGDLLLMDAGC------- 239 (413)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g~~~~~~h~~~~~~~i~~Gd~v~iD~g~------- 239 (413)
| .+.+||+++++|.|++++|+.|++++|++||+|++|+|+
T Consensus 62 --------------------------------~-~~~~f~~~v~~G~n~~~~H~~p~~~~l~~Gd~v~iD~g~~~~~~~y 108 (286)
T PRK07281 62 --------------------------------G-AMMDYPYATCCGLNDEVAHAFPRHYILKEGDLLKVDMVLSEPLDKS 108 (286)
T ss_pred --------------------------------C-cccCCCcceEEeccccccCCCCCCcCcCCCCEEEEEeccccccccc
Confidence 0 135799999999999999999999999999999999997
Q ss_pred --------------------eeCcEEeceEEEEeecCCCCHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHH--HHH
Q psy247 240 --------------------ELNGYDSDITRTWPISGQFTDHQKVLYEIVLDTQLKLLKLCEKSDSALNFIYRYA--YVF 297 (413)
Q Consensus 240 --------------------~~~GY~aDitRT~~v~G~~~~~~~~~~~~~~~a~~~~~~~lkp~G~~~~ei~~~~--~~~ 297 (413)
.|+||++|++|||.+ |+++++|+++|+.++++|+++++++|| |++++||++++ .+.
T Consensus 109 ~~d~~~~~~~~~~~~~~~~~~~~gy~~D~~rT~~v-G~~~~~~~~l~~~~~ea~~~ai~~~kp-G~~~~di~~a~~~~~~ 186 (286)
T PRK07281 109 IVDVSKLNFDNVEQMKKYTESYRGGLADSCWAYAV-GTPSDEVKNLMDVTKEAMYRGIEQAVV-GNRIGDIGAAIQEYAE 186 (286)
T ss_pred ccccccccccccccccccccccCCEEeeeEEEEEC-CCCCHHHHHHHHHHHHHHHHHHHHhcC-CCcHHHHHHHHHHHHH
Confidence 489999999999988 999999999999999999999999999 99999999998 667
Q ss_pred HcCcccccccccccCCCCccCCCCCCCCCCCCCCcceecCCCCccccCCCCCCCCCCCCCcEEEeCCeeeEc--------
Q psy247 298 QIGFKFCPHHSSHYLGMDVHDCAAIPRTIPVAPGVVFTVEPGMDVHDCAAIPRTIPVAPGMVFTVEPGVYIS-------- 369 (413)
Q Consensus 298 ~~g~~~~~h~~GHgiGl~~~E~p~~~~~~~~~~g~~~~~~pg~~~~~~~~~~~~~~L~~GMv~~iEPgi~~~-------- 369 (413)
+.|+..+.|++|||||+++||.|.++++.. .+.+.+|+|||||+|||++|+.
T Consensus 187 ~~G~~~~~~~~GHGIGl~~hE~P~i~~~~~--------------------~~~~~~Le~GMV~tiEPgiy~~~~~~~~~~ 246 (286)
T PRK07281 187 SRGYGVVRDLVGHGVGPTMHEEPMVPNYGT--------------------AGRGLRLREGMVLTIEPMINTGTWEIDTDM 246 (286)
T ss_pred HcCCccCCCeeeeeCCCccCCCCcCCCccc--------------------CCCCCEECCCCEEEECCeeEcCCcceeccc
Confidence 788865789999999999999998754311 2357899999999999999984
Q ss_pred CCCCCcccccccceEEEceeEEEeCCCCcccCCCCCCCC
Q psy247 370 KDCKETRPEFRGMGIRIEDDILIDKSSNVENLSAMCPKN 408 (413)
Q Consensus 370 ~~~~~~~~~~~~~gvriED~vlVt~~G~~e~Lt~~~p~~ 408 (413)
.++|......+++|+|+||+|+||++|+ |+||. .+++
T Consensus 247 ~~gw~~~~~~g~~gvr~EdtvlVT~~G~-e~LT~-~~~~ 283 (286)
T PRK07281 247 KTGWAHKTLDGGLSCQYEHQFVITKDGP-VILTS-QGEE 283 (286)
T ss_pred CCCceEEecCCCcEEEeccEEEEeCCcc-eECCC-CCcc
Confidence 2345544445567999999999999999 99998 4665
No 13
>TIGR00500 met_pdase_I methionine aminopeptidase, type I. Methionine aminopeptidase is a cobalt-binding enzyme. Bacterial and organellar examples (type I) differ from eukaroytic and archaeal (type II) examples in lacking a region of approximately 60 amino acids between the 4th and 5th cobalt-binding ligands. This model describes type I. The role of this protein in general is to produce the mature form of cytosolic proteins by removing the N-terminal methionine.
Probab=100.00 E-value=2.6e-48 Score=370.11 Aligned_cols=236 Identities=24% Similarity=0.325 Sum_probs=209.8
Q ss_pred ccCCHHHHHHHHHHHHHHHHHHHHHHhccCCCCCHHHHHHHHHHHHHHcCCCCCCCCceeecCCCccccccccCCccccc
Q psy247 88 LYKSDSEQEMMRETCRIASEGFKETIGFSKPGRTEHELFTKFDYEVRMRGAQILAYPPVVASGDNANVIHYVHNNQKCCH 167 (413)
Q Consensus 88 ~vKs~~Ei~~~r~A~~i~~~~~~~~~~~~~~G~tE~el~~~~~~~~~~~G~~~~~~~~iv~sG~~~~~~~~~~~~~~~~~ 167 (413)
+|||++||++||+|+++++++++.+++.++||+||.||++++.+.+.++|++.. +.
T Consensus 2 ~iKs~~Ei~~~r~A~~i~~~~~~~~~~~i~~G~tE~el~~~~~~~~~~~G~~~~-~~----------------------- 57 (247)
T TIGR00500 2 SLKSPDEIEKIRKAGRLAAEVLEELEREVKPGVSTKELDRIAKDFIEKHGAKPA-FL----------------------- 57 (247)
T ss_pred ccCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHCCCCcc-cc-----------------------
Confidence 699999999999999999999999999999999999999999999999997621 10
Q ss_pred CcceecccccCCCCCCHHHHHhhhHHHHHhhcccccCCCceeccCCCccccccccCCccccCCCEEEEecceeeCcEEec
Q psy247 168 GDLLLMDAGFSKPGRTEHELFTKFDYEVRMRGAQILAYPPVVASGDNANVIHYVHNNQKCCHGDLLLMDAGCELNGYDSD 247 (413)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g~~~~~~h~~~~~~~i~~Gd~v~iD~g~~~~GY~aD 247 (413)
.+.+|++++++|.|+..+|+.|++++|++||+|++|+|+.|+||++|
T Consensus 58 ---------------------------------~~~~~~~~~~~~~n~~~~H~~~~~~~l~~Gd~v~iD~g~~~~gY~aD 104 (247)
T TIGR00500 58 ---------------------------------GYYGFPGSVCISVNEVVIHGIPDKKVLKDGDIVNIDVGVIYDGYHGD 104 (247)
T ss_pred ---------------------------------CCCCCCceeEeccccEEEecCCCCcccCCCCEEEEEEEEEECCEEEE
Confidence 01357788889999999999999999999999999999999999999
Q ss_pred eEEEEeecCCCCHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHH--HHHHcCcccccccccccCCCCccCCCCCCCC
Q psy247 248 ITRTWPISGQFTDHQKVLYEIVLDTQLKLLKLCEKSDSALNFIYRYA--YVFQIGFKFCPHHSSHYLGMDVHDCAAIPRT 325 (413)
Q Consensus 248 itRT~~v~G~~~~~~~~~~~~~~~a~~~~~~~lkp~G~~~~ei~~~~--~~~~~g~~~~~h~~GHgiGl~~~E~p~~~~~ 325 (413)
++|||++ |+|+++|+++|+.++++++++++++|| |++++|+++++ .+.+.|+....|.+||+||+++||.|.+++|
T Consensus 105 ~~RT~~v-G~~~~~~~~~~~~~~~a~~~~~~~~kp-G~~~~~v~~~~~~~~~~~g~~~~~~~~GHgiG~~~~e~p~i~~~ 182 (247)
T TIGR00500 105 TAKTFLV-GKISPEAEKLLECTEESLYKAIEEAKP-GNRIGEIGAAIQKYAEAKGFSVVREYCGHGIGRKFHEEPQIPNY 182 (247)
T ss_pred EEEEEEc-CCCCHHHHHHHHHHHHHHHHHHHHhcC-CCCHHHHHHHHHHHHHHcCCEeccCccCCccCcccCCCCccCCc
Confidence 9999999 899999999999999999999999999 99999999999 7778888666788999999999999977644
Q ss_pred CCCCCCcceecCCCCccccCCCCCCCCCCCCCcEEEeCCeeeEcC-------CCCCcccccccceEEEceeEEEeCCCCc
Q psy247 326 IPVAPGVVFTVEPGMDVHDCAAIPRTIPVAPGMVFTVEPGVYISK-------DCKETRPEFRGMGIRIEDDILIDKSSNV 398 (413)
Q Consensus 326 ~~~~~g~~~~~~pg~~~~~~~~~~~~~~L~~GMv~~iEPgi~~~~-------~~~~~~~~~~~~gvriED~vlVt~~G~~ 398 (413)
.. .+++.+|++||||+|||++|++. ++|....+++.+|+|+||+|+||++|+
T Consensus 183 ~~--------------------~~~~~~l~~gmv~~iEp~i~~~~~~~~~~~~~~~~~~~~~~~g~ried~v~Vt~~G~- 241 (247)
T TIGR00500 183 GK--------------------KFTNVRLKEGMVFTIEPMVNTGTEEITTAADGWTVKTKDGSLSAQFEHTIVITDNGP- 241 (247)
T ss_pred Cc--------------------CCCCCEecCCCEEEEeeEEEcCCCcEEECCCCCEEEccCCCeEEEEeEEEEEcCCcc-
Confidence 21 23578999999999999999853 345555566678999999999999999
Q ss_pred ccCCC
Q psy247 399 ENLSA 403 (413)
Q Consensus 399 e~Lt~ 403 (413)
|+||.
T Consensus 242 e~Lt~ 246 (247)
T TIGR00500 242 EILTE 246 (247)
T ss_pred EEccC
Confidence 99986
No 14
>PRK12318 methionine aminopeptidase; Provisional
Probab=100.00 E-value=1.1e-47 Score=373.18 Aligned_cols=246 Identities=23% Similarity=0.310 Sum_probs=211.7
Q ss_pred HHHHHHc-cCCHHHHHHHHHHHHHHHHHHHHHHhccCCCCCHHHHHHHHHHHHHHcCCCCCCCCceeecCCCcccccccc
Q psy247 82 LFHQLRL-YKSDSEQEMMRETCRIASEGFKETIGFSKPGRTEHELFTKFDYEVRMRGAQILAYPPVVASGDNANVIHYVH 160 (413)
Q Consensus 82 ~l~~~R~-vKs~~Ei~~~r~A~~i~~~~~~~~~~~~~~G~tE~el~~~~~~~~~~~G~~~~~~~~iv~sG~~~~~~~~~~ 160 (413)
.++.+|. |||++||++||+|++|++++++++++.+++|+||.||++.+.+.+.+.|+.. ++.
T Consensus 35 ~~~~~~i~IKs~~EIe~~R~Aa~I~~~a~~a~~~~irpG~tE~Eiaa~~~~~~~~~G~~~-~~~---------------- 97 (291)
T PRK12318 35 YASQYDIIIKTPEQIEKIRKACQVTARILDALCEAAKEGVTTNELDELSRELHKEYNAIP-APL---------------- 97 (291)
T ss_pred ccCCCceEECCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHcCCCc-ccc----------------
Confidence 3444555 9999999999999999999999999999999999999998888887777541 100
Q ss_pred CCcccccCcceecccccCCCCCCHHHHHhhhHHHHHhhcccccCCCceeccCCCccccccccCCccccCCCEEEEeccee
Q psy247 161 NNQKCCHGDLLLMDAGFSKPGRTEHELFTKFDYEVRMRGAQILAYPPVVASGDNANVIHYVHNNQKCCHGDLLLMDAGCE 240 (413)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g~~~~~~h~~~~~~~i~~Gd~v~iD~g~~ 240 (413)
+....+|++++++|.|+.++|+.|+++++++||+|++|+|+.
T Consensus 98 --------------------------------------~~~~~~f~~~v~~g~n~~~~H~~p~~~~l~~GD~V~vD~g~~ 139 (291)
T PRK12318 98 --------------------------------------NYGSPPFPKTICTSLNEVICHGIPNDIPLKNGDIMNIDVSCI 139 (291)
T ss_pred --------------------------------------ccCCCCCCcceEeeccceeecCCCCCCccCCCCEEEEEEeEE
Confidence 000136888999999999999999999999999999999999
Q ss_pred eCcEEeceEEEEeecCCCCHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHH--HHHHcCcccccccccccCCCCccC
Q psy247 241 LNGYDSDITRTWPISGQFTDHQKVLYEIVLDTQLKLLKLCEKSDSALNFIYRYA--YVFQIGFKFCPHHSSHYLGMDVHD 318 (413)
Q Consensus 241 ~~GY~aDitRT~~v~G~~~~~~~~~~~~~~~a~~~~~~~lkp~G~~~~ei~~~~--~~~~~g~~~~~h~~GHgiGl~~~E 318 (413)
|+||++|++|||++ |+|+++|+++|+.++++++++++++|| |++++||++++ .+.+.|+....|++||+||+++||
T Consensus 140 ~~GY~aDitRT~~v-G~~~~~~~~~~~~~~~a~~~~i~~~rp-G~~~~dv~~a~~~~~~~~G~~~~~~~~GHgIGl~~hE 217 (291)
T PRK12318 140 VDGYYGDCSRMVMI-GEVSEIKKKVCQASLECLNAAIAILKP-GIPLYEIGEVIENCADKYGFSVVDQFVGHGVGIKFHE 217 (291)
T ss_pred ECcEEEEEEEEEEC-CCCCHHHHHHHHHHHHHHHHHHHHhcC-CCCHHHHHHHHHHHHHHcCCccCCCcccCCcCccccC
Confidence 99999999999999 999999999999999999999999999 99999999998 677888865578999999999999
Q ss_pred CCCCCCCCCCCCCcceecCCCCccccCCCCCCCCCCCCCcEEEeCCeeeEcC--------CCCCcccccccceEEEceeE
Q psy247 319 CAAIPRTIPVAPGVVFTVEPGMDVHDCAAIPRTIPVAPGMVFTVEPGVYISK--------DCKETRPEFRGMGIRIEDDI 390 (413)
Q Consensus 319 ~p~~~~~~~~~~g~~~~~~pg~~~~~~~~~~~~~~L~~GMv~~iEPgi~~~~--------~~~~~~~~~~~~gvriED~v 390 (413)
.|.++... .+.+.+|++||||+|||++|+++ ++|.+....+..++++||||
T Consensus 218 ~P~i~~~~---------------------~~~~~~L~~GMV~~iEP~i~~~~~~g~~~~~~~~~~~~~~g~~~~~~edtv 276 (291)
T PRK12318 218 NPYVPHHR---------------------NSSKIPLAPGMIFTIEPMINVGKKEGVIDPINHWEARTCDNQPSAQWEHTI 276 (291)
T ss_pred CCcccCcC---------------------CCCCCEeCCCCEEEECCEEEcCCCceEEecCCCcEEEecCCCeeeeeeeEE
Confidence 99875321 23468899999999999999873 44555555555678899999
Q ss_pred EEeCCCCcccCCCCCCC
Q psy247 391 LIDKSSNVENLSAMCPK 407 (413)
Q Consensus 391 lVt~~G~~e~Lt~~~p~ 407 (413)
+||++|+ |+||. +|+
T Consensus 277 ~VTe~G~-e~LT~-~~~ 291 (291)
T PRK12318 277 LITETGY-EILTL-LDK 291 (291)
T ss_pred EEcCCcc-eeCCC-CCC
Confidence 9999999 99998 675
No 15
>PRK05716 methionine aminopeptidase; Validated
Probab=100.00 E-value=9.2e-47 Score=360.32 Aligned_cols=241 Identities=24% Similarity=0.287 Sum_probs=210.7
Q ss_pred HccCCHHHHHHHHHHHHHHHHHHHHHHhccCCCCCHHHHHHHHHHHHHHcCCCCCCCCceeecCCCccccccccCCcccc
Q psy247 87 RLYKSDSEQEMMRETCRIASEGFKETIGFSKPGRTEHELFTKFDYEVRMRGAQILAYPPVVASGDNANVIHYVHNNQKCC 166 (413)
Q Consensus 87 R~vKs~~Ei~~~r~A~~i~~~~~~~~~~~~~~G~tE~el~~~~~~~~~~~G~~~~~~~~iv~sG~~~~~~~~~~~~~~~~ 166 (413)
-+|||++||++||+|++++++++.++++.++||+||.|+++.+.+.+.++|+... +.
T Consensus 3 ~~iKs~~Ei~~~r~A~~i~~~~~~~a~~~i~pG~se~ela~~~~~~~~~~G~~~~-~~---------------------- 59 (252)
T PRK05716 3 ITIKTPEEIEKMRVAGRLAAEVLDEIEPHVKPGVTTKELDRIAEEYIRDQGAIPA-PL---------------------- 59 (252)
T ss_pred eeeCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHCCCEec-cc----------------------
Confidence 4799999999999999999999999999999999999999999999999886521 00
Q ss_pred cCcceecccccCCCCCCHHHHHhhhHHHHHhhcccccCCCceeccCCCccccccccCCccccCCCEEEEecceeeCcEEe
Q psy247 167 HGDLLLMDAGFSKPGRTEHELFTKFDYEVRMRGAQILAYPPVVASGDNANVIHYVHNNQKCCHGDLLLMDAGCELNGYDS 246 (413)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g~~~~~~h~~~~~~~i~~Gd~v~iD~g~~~~GY~a 246 (413)
...+|++++++|.|+..+|+.|++++|++||+|++|+|+.|+||++
T Consensus 60 ----------------------------------~~~~~~~~~~~g~~~~~~h~~~~~~~l~~Gd~v~id~g~~~~gY~~ 105 (252)
T PRK05716 60 ----------------------------------GYHGFPKSICTSVNEVVCHGIPSDKVLKEGDIVNIDVTVIKDGYHG 105 (252)
T ss_pred ----------------------------------CCCCCCcCeEecccceeecCCCCCcccCCCCEEEEEEEEEECCEEE
Confidence 1235777788889999999999999999999999999999999999
Q ss_pred ceEEEEeecCCCCHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHH--HHHHcCcccccccccccCCCCccCCCCCCC
Q psy247 247 DITRTWPISGQFTDHQKVLYEIVLDTQLKLLKLCEKSDSALNFIYRYA--YVFQIGFKFCPHHSSHYLGMDVHDCAAIPR 324 (413)
Q Consensus 247 DitRT~~v~G~~~~~~~~~~~~~~~a~~~~~~~lkp~G~~~~ei~~~~--~~~~~g~~~~~h~~GHgiGl~~~E~p~~~~ 324 (413)
|++||+++ |+++++|+++|+.++++++++++++|| |++++||++++ .+.+.|+....|++||+||+.+||.|.+++
T Consensus 106 d~~RT~~v-G~~~~~~~~~~~~~~~~~~~~~~~~~p-G~~~~dv~~~~~~~~~~~g~~~~~~~~GHgiG~~~~e~p~~~~ 183 (252)
T PRK05716 106 DTSRTFGV-GEISPEDKRLCEVTKEALYLGIAAVKP-GARLGDIGHAIQKYAEAEGFSVVREYCGHGIGRKFHEEPQIPH 183 (252)
T ss_pred EeEEEEEC-CCCCHHHHHHHHHHHHHHHHHHHHhcC-CCCHHHHHHHHHHHHHHcCCeeecCccccccCCccCCCCccCc
Confidence 99999999 999999999999999999999999999 99999999999 677888865678999999999999997653
Q ss_pred CCCCCCCcceecCCCCccccCCCCCCCCCCCCCcEEEeCCeeeEcC-------CCCCcccccccceEEEceeEEEeCCCC
Q psy247 325 TIPVAPGVVFTVEPGMDVHDCAAIPRTIPVAPGMVFTVEPGVYISK-------DCKETRPEFRGMGIRIEDDILIDKSSN 397 (413)
Q Consensus 325 ~~~~~~g~~~~~~pg~~~~~~~~~~~~~~L~~GMv~~iEPgi~~~~-------~~~~~~~~~~~~gvriED~vlVt~~G~ 397 (413)
+.. .+++.+|+|||||+|||++|++. ++|.+..+.+.+|+|+||+|+||++|+
T Consensus 184 ~~~--------------------~~~~~~le~Gmv~~vEp~i~~~~~~~~~~~~~~~~~~~~g~~g~~~ed~v~Vt~~G~ 243 (252)
T PRK05716 184 YGA--------------------PGDGPVLKEGMVFTIEPMINAGKREVKTLKDGWTVVTKDGSLSAQYEHTVAVTEDGP 243 (252)
T ss_pred CCC--------------------CCCCCEecCCCEEEEccEEEcCCCceEEcCCCCEEEccCCCcEEeeeeEEEEcCCcc
Confidence 210 34678999999999999999742 344444555667999999999999999
Q ss_pred cccCCCCCCCC
Q psy247 398 VENLSAMCPKN 408 (413)
Q Consensus 398 ~e~Lt~~~p~~ 408 (413)
|+||. .|++
T Consensus 244 -e~Lt~-~~~~ 252 (252)
T PRK05716 244 -EILTL-RPEE 252 (252)
T ss_pred -EEeeC-CCCC
Confidence 99998 5874
No 16
>PLN03158 methionine aminopeptidase; Provisional
Probab=100.00 E-value=1.4e-46 Score=377.08 Aligned_cols=249 Identities=20% Similarity=0.230 Sum_probs=218.0
Q ss_pred HHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHhccCCCCCHHHHHHHHHHHHHHcCCCCCCCCceeecCCCccccccccC
Q psy247 82 LFHQLRLYKSDSEQEMMRETCRIASEGFKETIGFSKPGRTEHELFTKFDYEVRMRGAQILAYPPVVASGDNANVIHYVHN 161 (413)
Q Consensus 82 ~l~~~R~vKs~~Ei~~~r~A~~i~~~~~~~~~~~~~~G~tE~el~~~~~~~~~~~G~~~~~~~~iv~sG~~~~~~~~~~~ 161 (413)
.+...|.|||++||+.||+|++++++++..+.+.++||+||.||.+.+.+.+.++|+....
T Consensus 130 ~~~~~~~IKsp~EIe~mR~A~~ia~~al~~a~~~irpGvTe~EI~~~v~~~~~~~Ga~ps~------------------- 190 (396)
T PLN03158 130 DLQHSVEIKTPEQIQRMRETCRIAREVLDAAARAIKPGVTTDEIDRVVHEATIAAGGYPSP------------------- 190 (396)
T ss_pred ccccceeeCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHcCCcccc-------------------
Confidence 3456799999999999999999999999999999999999999999999999998865210
Q ss_pred CcccccCcceecccccCCCCCCHHHHHhhhHHHHHhhcccccCCCceeccCCCccccccccCCccccCCCEEEEecceee
Q psy247 162 NQKCCHGDLLLMDAGFSKPGRTEHELFTKFDYEVRMRGAQILAYPPVVASGDNANVIHYVHNNQKCCHGDLLLMDAGCEL 241 (413)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g~~~~~~h~~~~~~~i~~Gd~v~iD~g~~~ 241 (413)
..+.+||.++++|.|..++|+.|++++|++||+|++|+|+.+
T Consensus 191 --------------------------------------l~y~~fp~svcts~N~~i~Hgip~~r~L~~GDiV~iDvg~~~ 232 (396)
T PLN03158 191 --------------------------------------LNYHFFPKSCCTSVNEVICHGIPDARKLEDGDIVNVDVTVYY 232 (396)
T ss_pred --------------------------------------ccccCCCceeeecccccccCCCCCCccCCCCCEEEEEEeEEE
Confidence 113468889999999999999999999999999999999999
Q ss_pred CcEEeceEEEEeecCCCCHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHH--HHHHcCcccccccccccCCCCccCC
Q psy247 242 NGYDSDITRTWPISGQFTDHQKVLYEIVLDTQLKLLKLCEKSDSALNFIYRYA--YVFQIGFKFCPHHSSHYLGMDVHDC 319 (413)
Q Consensus 242 ~GY~aDitRT~~v~G~~~~~~~~~~~~~~~a~~~~~~~lkp~G~~~~ei~~~~--~~~~~g~~~~~h~~GHgiGl~~~E~ 319 (413)
+||++|++|||++ |+++++++++|++++++++++++++|| |++++||++++ .+.+.|+....|.+|||||+.+||.
T Consensus 233 ~GY~aD~tRT~~V-G~~~~e~~~l~e~~~eal~~aI~~vkP-Gv~~~dI~~~i~~~~~~~G~~~v~~~~GHGIG~~~He~ 310 (396)
T PLN03158 233 KGCHGDLNETFFV-GNVDEASRQLVKCTYECLEKAIAIVKP-GVRYREVGEVINRHATMSGLSVVKSYCGHGIGELFHCA 310 (396)
T ss_pred CCEEEeEEeEEEc-CCCCHHHHHHHHHHHHHHHHHHHHcCC-CCCHHHHHHHHHHHHHHcCCCccCCccCCccccccCCC
Confidence 9999999999999 999999999999999999999999999 99999999998 6678898777899999999999999
Q ss_pred CCCCCCCCCCCCcceecCCCCccccCCCCCCCCCCCCCcEEEeCCeeeEc-------CCCCCcccccccceEEEceeEEE
Q psy247 320 AAIPRTIPVAPGVVFTVEPGMDVHDCAAIPRTIPVAPGMVFTVEPGVYIS-------KDCKETRPEFRGMGIRIEDDILI 392 (413)
Q Consensus 320 p~~~~~~~~~~g~~~~~~pg~~~~~~~~~~~~~~L~~GMv~~iEPgi~~~-------~~~~~~~~~~~~~gvriED~vlV 392 (413)
|.++.+.. .....+|+|||||+|||++|.. +++|......+..++|+||||+|
T Consensus 311 P~i~~~~~--------------------~~~~~~l~~GMVfTIEP~i~~g~~~~~~~~d~wt~~t~dG~~~aq~E~tvlV 370 (396)
T PLN03158 311 PNIPHYAR--------------------NKAVGVMKAGQVFTIEPMINAGVWRDRMWPDGWTAVTADGKRSAQFEHTLLV 370 (396)
T ss_pred CCCCcccC--------------------CCCCCEecCCcEEEECCeeccCcccceecCCCceEEecCCceeeEeeeEEEE
Confidence 98763210 1224789999999999999963 24555555555568999999999
Q ss_pred eCCCCcccCCCCCCCCcc
Q psy247 393 DKSSNVENLSAMCPKNID 410 (413)
Q Consensus 393 t~~G~~e~Lt~~~p~~~~ 410 (413)
|++|+ |+||...|+.+.
T Consensus 371 Te~G~-EiLT~~~~~~~~ 387 (396)
T PLN03158 371 TETGV-EVLTARLPSSPD 387 (396)
T ss_pred eCCcc-eECCCCCCCCcc
Confidence 99999 999987787754
No 17
>PRK12896 methionine aminopeptidase; Reviewed
Probab=100.00 E-value=6.1e-46 Score=355.26 Aligned_cols=238 Identities=21% Similarity=0.271 Sum_probs=210.2
Q ss_pred HHccCCHHHHHHHHHHHHHHHHHHHHHHhccCCCCCHHHHHHHHHHHHHHcCCCCCCCCceeecCCCccccccccCCccc
Q psy247 86 LRLYKSDSEQEMMRETCRIASEGFKETIGFSKPGRTEHELFTKFDYEVRMRGAQILAYPPVVASGDNANVIHYVHNNQKC 165 (413)
Q Consensus 86 ~R~vKs~~Ei~~~r~A~~i~~~~~~~~~~~~~~G~tE~el~~~~~~~~~~~G~~~~~~~~iv~sG~~~~~~~~~~~~~~~ 165 (413)
+++|||++||++||+|++++++++..+++.++||+||.||++.+.+.+.++|++. ++.
T Consensus 7 ~~~vKs~~Ei~~~r~a~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~~G~~~-~~~--------------------- 64 (255)
T PRK12896 7 GMEIKSPRELEKMRKIGRIVATALKEMGKAVEPGMTTKELDRIAEKRLEEHGAIP-SPE--------------------- 64 (255)
T ss_pred ceeECCHHHHHHHHHHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHCCCEe-Ccc---------------------
Confidence 4689999999999999999999999999999999999999999999999998762 111
Q ss_pred ccCcceecccccCCCCCCHHHHHhhhHHHHHhhcccccCCCceeccCCCccccccccCCccccCCCEEEEecceeeCcEE
Q psy247 166 CHGDLLLMDAGFSKPGRTEHELFTKFDYEVRMRGAQILAYPPVVASGDNANVIHYVHNNQKCCHGDLLLMDAGCELNGYD 245 (413)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g~~~~~~h~~~~~~~i~~Gd~v~iD~g~~~~GY~ 245 (413)
.+.+|++.+++|.|...+|+.|++++|++||+|++|+|+.|+||+
T Consensus 65 -----------------------------------~~~~~~~~~~~~~n~~~~h~~p~~~~l~~Gd~v~iD~g~~~~gY~ 109 (255)
T PRK12896 65 -----------------------------------GYYGFPGSTCISVNEEVAHGIPGPRVIKDGDLVNIDVSAYLDGYH 109 (255)
T ss_pred -----------------------------------cCCCCCcceEecCCCeeEecCCCCccCCCCCEEEEEEeEEECcEE
Confidence 123578888889999999999999999999999999999999999
Q ss_pred eceEEEEeecCCCCHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHH--HHHHcCcccccccccccCCCCccCCCCCC
Q psy247 246 SDITRTWPISGQFTDHQKVLYEIVLDTQLKLLKLCEKSDSALNFIYRYA--YVFQIGFKFCPHHSSHYLGMDVHDCAAIP 323 (413)
Q Consensus 246 aDitRT~~v~G~~~~~~~~~~~~~~~a~~~~~~~lkp~G~~~~ei~~~~--~~~~~g~~~~~h~~GHgiGl~~~E~p~~~ 323 (413)
+|++||+++ |+++++++++|+.++++++++++++|| |+++++|++++ .+.+.|+....|.+||+||+.+||.|.+.
T Consensus 110 aD~~RT~~v-G~~~~~~~~~~~~~~~a~~~~~~~~kp-G~~~~~v~~~~~~~~~~~G~~~~~~~~GHgiG~~~he~p~~~ 187 (255)
T PRK12896 110 GDTGITFAV-GPVSEEAEKLCRVAEEALWAGIKQVKA-GRPLNDIGRAIEDFAKKNGYSVVRDLTGHGVGRSLHEEPSVI 187 (255)
T ss_pred EeeEEEEEC-CCCCHHHHHHHHHHHHHHHHHHHHhcC-CCCHHHHHHHHHHHHHHcCCEeccCcccCCcCcccccCCCcc
Confidence 999999999 999999999999999999999999999 99999999998 77788887678999999999999999643
Q ss_pred C-CCCCCCCcceecCCCCccccCCCCCCCCCCCCCcEEEeCCeeeEc-------CCCCCcccccccceEEEceeEEEeCC
Q psy247 324 R-TIPVAPGVVFTVEPGMDVHDCAAIPRTIPVAPGMVFTVEPGVYIS-------KDCKETRPEFRGMGIRIEDDILIDKS 395 (413)
Q Consensus 324 ~-~~~~~~g~~~~~~pg~~~~~~~~~~~~~~L~~GMv~~iEPgi~~~-------~~~~~~~~~~~~~gvriED~vlVt~~ 395 (413)
. +. ..+++.+|++||||+|||++|.. .++|.+....+.+|+|+||||+||++
T Consensus 188 ~~~~--------------------~~~~~~~le~GmV~~iEp~i~~g~~~~~~~~~~~~~~~~~~~~~~~~edtv~vt~~ 247 (255)
T PRK12896 188 LTYT--------------------DPLPNRLLRPGMTLAVEPFLNLGAKDAETLDDGWTVVTPDKSLSAQFEHTVVVTRD 247 (255)
T ss_pred ccCC--------------------CCCCCCEecCCcEEEEeceEEcCCCceEEcCCCCEEEecCCCeEEEEEEEEEEcCC
Confidence 1 10 02357899999999999999853 45666666777789999999999999
Q ss_pred CCcccCCC
Q psy247 396 SNVENLSA 403 (413)
Q Consensus 396 G~~e~Lt~ 403 (413)
|+ |+||+
T Consensus 248 G~-e~Lt~ 254 (255)
T PRK12896 248 GP-EILTD 254 (255)
T ss_pred cc-eecCC
Confidence 99 99996
No 18
>cd01087 Prolidase Prolidase. E.C. 3.4.13.9. Also known as Xaa-Pro dipeptidase, X-Pro dipeptidase, proline dipeptidase., imidodipeptidase, peptidase D, gamma-peptidase. Catalyses hydrolysis of Xaa-Pro dipeptides; also acts on aminoacyl-hydroxyproline analogs. No action on Pro-Pro.
Probab=100.00 E-value=1.1e-45 Score=351.17 Aligned_cols=222 Identities=47% Similarity=0.795 Sum_probs=194.5
Q ss_pred HHHHHHHHHHHHHHHHHHHhccCCCCCHHHHHHHHHHHHHHcCCCCCCCCceeecCCCccccccccCCcccccCcceecc
Q psy247 95 QEMMRETCRIASEGFKETIGFSKPGRTEHELFTKFDYEVRMRGAQILAYPPVVASGDNANVIHYVHNNQKCCHGDLLLMD 174 (413)
Q Consensus 95 i~~~r~A~~i~~~~~~~~~~~~~~G~tE~el~~~~~~~~~~~G~~~~~~~~iv~sG~~~~~~~~~~~~~~~~~~~~~~~~ 174 (413)
|++||+|++++++++.++.+.++||+||.||++.+.+.+++.|++ ..|
T Consensus 1 i~~lr~A~~i~~~~~~~~~~~i~pG~tE~ei~~~~~~~~~~~G~~-~~~------------------------------- 48 (243)
T cd01087 1 IELMRKACDISAEAHRAAMKASRPGMSEYELEAEFEYEFRSRGAR-LAY------------------------------- 48 (243)
T ss_pred CHHHHHHHHHHHHHHHHHHHHCcCCCcHHHHHHHHHHHHHHcCCC-cCC-------------------------------
Confidence 679999999999999999999999999999999999999999876 333
Q ss_pred cccCCCCCCHHHHHhhhHHHHHhhcccccCCCceeccCCCccccccccCCccccCCCEEEEecceeeCcEEeceEEEEee
Q psy247 175 AGFSKPGRTEHELFTKFDYEVRMRGAQILAYPPVVASGDNANVIHYVHNNQKCCHGDLLLMDAGCELNGYDSDITRTWPI 254 (413)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g~~~~~~h~~~~~~~i~~Gd~v~iD~g~~~~GY~aDitRT~~v 254 (413)
++++++|.|+..+|+.|++++|++||+|++|+|+.|+||++|++|||++
T Consensus 49 -------------------------------~~~v~~g~~~~~~H~~~~~~~l~~Gd~v~vD~g~~~~GY~ad~~Rt~~v 97 (243)
T cd01087 49 -------------------------------SYIVAAGSNAAILHYVHNDQPLKDGDLVLIDAGAEYGGYASDITRTFPV 97 (243)
T ss_pred -------------------------------CCeEEECCCccccCCCcCCCcCCCCCEEEEEeCceECCEeeeeeEEEEe
Confidence 4455566666778888889999999999999999999999999999999
Q ss_pred cCCCCHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHH--HHHHc----C---------------cccccccccccCC
Q psy247 255 SGQFTDHQKVLYEIVLDTQLKLLKLCEKSDSALNFIYRYA--YVFQI----G---------------FKFCPHHSSHYLG 313 (413)
Q Consensus 255 ~G~~~~~~~~~~~~~~~a~~~~~~~lkp~G~~~~ei~~~~--~~~~~----g---------------~~~~~h~~GHgiG 313 (413)
+|+|+++|+++|+.++++++++++++|| |++++||++++ .+.+. | ..+++|++||+||
T Consensus 98 gg~~~~~~~~~~~~~~~a~~~~i~~~rp-G~~~~~v~~a~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~h~~GhgiG 176 (243)
T cd01087 98 NGKFTDEQRELYEAVLAAQKAAIAACKP-GVSYEDIHLLAHRVLAEGLKELGILKGDVDEIVESGAYAKFFPHGLGHYLG 176 (243)
T ss_pred CCcCCHHHHHHHHHHHHHHHHHHHHhCC-CCcHHHHHHHHHHHHHHHHHhcCcccCchHhhhhhhhhhhhcCCCCccccC
Confidence 6799999999999999999999999999 99999999988 33332 1 1588999999999
Q ss_pred CCccCCCCCCCCCCCCCCcceecCCCCccccCCCCCCCCCCCCCcEEEeCCeeeEcCCCCCcccccccceEEEceeEEEe
Q psy247 314 MDVHDCAAIPRTIPVAPGVVFTVEPGMDVHDCAAIPRTIPVAPGMVFTVEPGVYISKDCKETRPEFRGMGIRIEDDILID 393 (413)
Q Consensus 314 l~~~E~p~~~~~~~~~~g~~~~~~pg~~~~~~~~~~~~~~L~~GMv~~iEPgi~~~~~~~~~~~~~~~~gvriED~vlVt 393 (413)
+++||.|.+.. . .+++.+|++||||+|||++|+++.+...+++++.+|+|+||+|+||
T Consensus 177 l~~~e~p~~~~------------~----------~~~~~~l~~GMv~~iEp~iy~~~~~~~~~~~~~~~g~~ied~v~Vt 234 (243)
T cd01087 177 LDVHDVGGYLR------------Y----------LRRARPLEPGMVITIEPGIYFIPDLLDVPEYFRGGGIRIEDDVLVT 234 (243)
T ss_pred cccccCccccc------------c----------CCCCCCCCCCCEEEECCEEEeCCcccccccccceeEEEeeeEEEEc
Confidence 99999997510 0 2467899999999999999999876666677777899999999999
Q ss_pred CCCCcccCCC
Q psy247 394 KSSNVENLSA 403 (413)
Q Consensus 394 ~~G~~e~Lt~ 403 (413)
++|+ |+||+
T Consensus 235 ~~G~-e~Lt~ 243 (243)
T cd01087 235 EDGP-ENLTR 243 (243)
T ss_pred CCcc-eeCcC
Confidence 9999 99985
No 19
>cd01090 Creatinase Creatine amidinohydrolase. E.C.3.5.3.3. Hydrolyzes creatine to sarcosine and urea.
Probab=100.00 E-value=4.3e-45 Score=343.92 Aligned_cols=225 Identities=19% Similarity=0.222 Sum_probs=192.2
Q ss_pred HHHHHHHHHHHHHHHHHHHhccCCCCCHHHHHHHHHHHHHHcCCCCCCCCceeecCCCccccccccCCcccccCcceecc
Q psy247 95 QEMMRETCRIASEGFKETIGFSKPGRTEHELFTKFDYEVRMRGAQILAYPPVVASGDNANVIHYVHNNQKCCHGDLLLMD 174 (413)
Q Consensus 95 i~~~r~A~~i~~~~~~~~~~~~~~G~tE~el~~~~~~~~~~~G~~~~~~~~iv~sG~~~~~~~~~~~~~~~~~~~~~~~~ 174 (413)
|++||+|+++++++++++++.++||+||.||++.+.+.+.+.|+....+..
T Consensus 1 I~~ir~Aa~i~d~~~~~~~~~i~pG~tE~ei~a~~~~~~~~~ga~~~~~~~----------------------------- 51 (228)
T cd01090 1 IALIRHGARIADIGGAAVVEAIREGVPEYEVALAGTQAMVREIAKTFPEVE----------------------------- 51 (228)
T ss_pred CHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCccCCccc-----------------------------
Confidence 679999999999999999999999999999999999999999876322210
Q ss_pred cccCCCCCCHHHHHhhhHHHHHhhcccccCCCceeccCCCccccccccCCccccCCCEEEEecceeeCcEEeceEEEEee
Q psy247 175 AGFSKPGRTEHELFTKFDYEVRMRGAQILAYPPVVASGDNANVIHYVHNNQKCCHGDLLLMDAGCELNGYDSDITRTWPI 254 (413)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g~~~~~~h~~~~~~~i~~Gd~v~iD~g~~~~GY~aDitRT~~v 254 (413)
..++.+++++|.|++.+|+.++++++++||+|++|+|+.|+||++|++|||++
T Consensus 52 ---------------------------~~~~~~~v~~G~~~~~~H~~~~~r~l~~GD~v~~d~g~~~~GY~ad~~RT~~v 104 (228)
T cd01090 52 ---------------------------LMDTWTWFQSGINTDGAHNPVTNRKVQRGDILSLNCFPMIAGYYTALERTLFL 104 (228)
T ss_pred ---------------------------ccCcceEEEeeccccccCCCCCCcccCCCCEEEEEEeEEECCEeeeeEEEEEC
Confidence 01223567888899999999999999999999999999999999999999999
Q ss_pred cCCCCHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHH--HHHHcCc-ccccccccccCCCCccCCCCCCCCCCCCCC
Q psy247 255 SGQFTDHQKVLYEIVLDTQLKLLKLCEKSDSALNFIYRYA--YVFQIGF-KFCPHHSSHYLGMDVHDCAAIPRTIPVAPG 331 (413)
Q Consensus 255 ~G~~~~~~~~~~~~~~~a~~~~~~~lkp~G~~~~ei~~~~--~~~~~g~-~~~~h~~GHgiGl~~~E~p~~~~~~~~~~g 331 (413)
|+|+++|+++|+++.++++++++++|| |++++||++++ .+.+.|+ .++.|++||++|+.+||+|.-. |
T Consensus 105 -G~~~~~~~~~~~~~~ea~~~~~~~~rp-G~~~~~v~~a~~~~~~~~G~~~~~~~~~GHgiGl~~he~~~~~-------g 175 (228)
T cd01090 105 -DEVSDAHLKIWEANVAVHERGLELIKP-GARCKDIAAELNEMYREHDLLRYRTFGYGHSFGVLSHYYGREA-------G 175 (228)
T ss_pred -CCCCHHHHHHHHHHHHHHHHHHHHcCC-CCcHHHHHHHHHHHHHHcCCCcccccccCcccccccccCCCcc-------c
Confidence 999999999999999999999999999 99999999999 7788888 6788999999999999987410 0
Q ss_pred cceecCCCCccccCCCCCCCCCCCCCcEEEeCCeeeEcCCCCCcccccccceEEEceeEEEeCCCCcccCCC
Q psy247 332 VVFTVEPGMDVHDCAAIPRTIPVAPGMVFTVEPGVYISKDCKETRPEFRGMGIRIEDDILIDKSSNVENLSA 403 (413)
Q Consensus 332 ~~~~~~pg~~~~~~~~~~~~~~L~~GMv~~iEPgi~~~~~~~~~~~~~~~~gvriED~vlVt~~G~~e~Lt~ 403 (413)
+ .+. .+.+.+|+|||||+|||++|++... .+.+|+|+||+|+||++|+ |+||.
T Consensus 176 ~--~~~----------~~~~~~Le~GMV~~iEP~i~~~~~~------~g~gG~ried~v~Vt~~G~-e~Lt~ 228 (228)
T cd01090 176 L--ELR----------EDIDTVLEPGMVVSMEPMIMLPEGQ------PGAGGYREHDILVINENGA-ENITG 228 (228)
T ss_pred c--ccC----------CCCCCccCCCCEEEECCEEeecccC------CCCcEEEeeeEEEECCCcc-ccCcC
Confidence 0 000 2356899999999999999986310 0116999999999999999 99984
No 20
>cd01086 MetAP1 Methionine Aminopeptidase 1. E.C. 3.4.11.18. Also known as methionyl aminopeptidase and Peptidase M. Catalyzes release of N-terminal amino acids, preferentially methionine, from peptides and arylamides.
Probab=100.00 E-value=1e-42 Score=329.74 Aligned_cols=229 Identities=25% Similarity=0.351 Sum_probs=198.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhccCCCCCHHHHHHHHHHHHHHcCCCCCCCCceeecCCCccccccccCCcccccCcceecc
Q psy247 95 QEMMRETCRIASEGFKETIGFSKPGRTEHELFTKFDYEVRMRGAQILAYPPVVASGDNANVIHYVHNNQKCCHGDLLLMD 174 (413)
Q Consensus 95 i~~~r~A~~i~~~~~~~~~~~~~~G~tE~el~~~~~~~~~~~G~~~~~~~~iv~sG~~~~~~~~~~~~~~~~~~~~~~~~ 174 (413)
|++||+|+++++++++++++.++||+||.||++.+.+.+.++|++...+
T Consensus 1 I~~lr~A~~i~~~~~~~~~~~~~pG~tE~ev~~~~~~~~~~~G~~~~~~------------------------------- 49 (238)
T cd01086 1 IEGMREAGRIVAEVLDELAKAIKPGVTTKELDQIAHEFIEEHGAYPAPL------------------------------- 49 (238)
T ss_pred CHHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHcCCCcccc-------------------------------
Confidence 6899999999999999999999999999999999999999999763110
Q ss_pred cccCCCCCCHHHHHhhhHHHHHhhcccccCCCceeccCCCccccccccCCccccCCCEEEEecceeeCcEEeceEEEEee
Q psy247 175 AGFSKPGRTEHELFTKFDYEVRMRGAQILAYPPVVASGDNANVIHYVHNNQKCCHGDLLLMDAGCELNGYDSDITRTWPI 254 (413)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g~~~~~~h~~~~~~~i~~Gd~v~iD~g~~~~GY~aDitRT~~v 254 (413)
.+.+|+..+++|.|++.+|+.|+++++++||+|++|+|+.|+||++|++||+++
T Consensus 50 --------------------------~~~~~~~~~~~~~~~~~~h~~~~~~~l~~Gd~v~id~g~~~~GY~ad~~RT~~~ 103 (238)
T cd01086 50 --------------------------GYYGFPKSICTSVNEVVCHGIPDDRVLKDGDIVNIDVGVELDGYHGDSARTFIV 103 (238)
T ss_pred --------------------------cCCCCCcceecCCCCceeCCCCCCcccCCCCEEEEEEEEEECCEEEEEEEEEEC
Confidence 013566677888889999999999999999999999999999999999999999
Q ss_pred cCCCCHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHH--HHHHcCcccccccccccCCCCccCCCCCCCCCCCCCCc
Q psy247 255 SGQFTDHQKVLYEIVLDTQLKLLKLCEKSDSALNFIYRYA--YVFQIGFKFCPHHSSHYLGMDVHDCAAIPRTIPVAPGV 332 (413)
Q Consensus 255 ~G~~~~~~~~~~~~~~~a~~~~~~~lkp~G~~~~ei~~~~--~~~~~g~~~~~h~~GHgiGl~~~E~p~~~~~~~~~~g~ 332 (413)
|+++++|+++|+.++++++++++++|| |++++||++++ .+.+.|+....|.+||++|+.+||.|.+..+.
T Consensus 104 -G~~~~~~~~~~~~~~~~~~~~~~~~~p-G~~~~~v~~~~~~~~~~~G~~~~~~~~GHgiG~~~~e~p~~~~~~------ 175 (238)
T cd01086 104 -GEVSEEAKKLVEVTEEALYKGIEAVKP-GNRIGDIGHAIEKYAEKNGYSVVREFGGHGIGRKFHEEPQIPNYG------ 175 (238)
T ss_pred -CCCCHHHHHHHHHHHHHHHHHHHHhcC-CCCHHHHHHHHHHHHHHcCcceecCccccCCCCccccCCCcCCcc------
Confidence 899999999999999999999999999 99999999998 77788886678999999999999999864211
Q ss_pred ceecCCCCccccCCCCCCCCCCCCCcEEEeCCeeeEcC-------CCCCcccccccceEEEceeEEEeCCCCcccCCC
Q psy247 333 VFTVEPGMDVHDCAAIPRTIPVAPGMVFTVEPGVYISK-------DCKETRPEFRGMGIRIEDDILIDKSSNVENLSA 403 (413)
Q Consensus 333 ~~~~~pg~~~~~~~~~~~~~~L~~GMv~~iEPgi~~~~-------~~~~~~~~~~~~gvriED~vlVt~~G~~e~Lt~ 403 (413)
. .+++.+|++||||++||++|+.. ..|....+.+.+|+|+||||+||++|+ |+||+
T Consensus 176 ----~----------~~~~~~le~Gmv~~iep~i~~~~~~~~~~~~~~~~~~~~g~~g~~~edtv~Vte~G~-e~Lt~ 238 (238)
T cd01086 176 ----R----------PGTGPKLKPGMVFTIEPMINLGTYEVVTLPDGWTVVTKDGSLSAQFEHTVLITEDGP-EILTL 238 (238)
T ss_pred ----C----------CCCCCEecCCCEEEEeeEEECCCCceEECCCCCEEEcCCCCEEEeeeeEEEEcCCcc-eeCCC
Confidence 0 24578999999999999999742 233333334457999999999999999 99984
No 21
>cd01092 APP-like Similar to Prolidase and Aminopeptidase P. The members of this subfamily presumably catalyse hydrolysis of Xaa-Pro dipeptides and/or release of any N-terminal amino acid, including proline, that is linked with proline.
Probab=100.00 E-value=2.7e-41 Score=312.74 Aligned_cols=205 Identities=37% Similarity=0.607 Sum_probs=184.9
Q ss_pred HHHHHHHHHHHHHHHHHHHhccCCCCCHHHHHHHHHHHHHHcCCCCCCCCceeecCCCccccccccCCcccccCcceecc
Q psy247 95 QEMMRETCRIASEGFKETIGFSKPGRTEHELFTKFDYEVRMRGAQILAYPPVVASGDNANVIHYVHNNQKCCHGDLLLMD 174 (413)
Q Consensus 95 i~~~r~A~~i~~~~~~~~~~~~~~G~tE~el~~~~~~~~~~~G~~~~~~~~iv~sG~~~~~~~~~~~~~~~~~~~~~~~~ 174 (413)
|++||+|++++++++.++.+.++||+||.||.+.+.+.+.++|++..+|+++
T Consensus 1 i~~~r~a~~i~~~~~~~~~~~~~~G~te~ei~~~~~~~~~~~g~~~~~~~~~---------------------------- 52 (208)
T cd01092 1 IELLRKAARIADKAFEELLEFIKPGMTEREVAAELEYFMRKLGAEGPSFDTI---------------------------- 52 (208)
T ss_pred CHHHHHHHHHHHHHHHHHHHHCcCCCCHHHHHHHHHHHHHHcCCCCCCCCcE----------------------------
Confidence 5799999999999999999999999999999999999999998775555554
Q ss_pred cccCCCCCCHHHHHhhhHHHHHhhcccccCCCceeccCCCccccccccCCccccCCCEEEEecceeeCcEEeceEEEEee
Q psy247 175 AGFSKPGRTEHELFTKFDYEVRMRGAQILAYPPVVASGDNANVIHYVHNNQKCCHGDLLLMDAGCELNGYDSDITRTWPI 254 (413)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g~~~~~~h~~~~~~~i~~Gd~v~iD~g~~~~GY~aDitRT~~v 254 (413)
+++|.|+..+|+.|+++++++||+|.+|+|+.|+||++|++||+++
T Consensus 53 ----------------------------------v~~g~~~~~~h~~~~~~~l~~gd~v~id~g~~~~gy~~d~~RT~~~ 98 (208)
T cd01092 53 ----------------------------------VASGPNSALPHGVPSDRKIEEGDLVLIDFGAIYDGYCSDITRTVAV 98 (208)
T ss_pred ----------------------------------EEECccccccCCCCCCcCcCCCCEEEEEeeeeECCEeccceeEEEC
Confidence 4455555667788888889999999999999999999999999999
Q ss_pred cCCCCHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHH--HHHHcCc-ccccccccccCCCCccCCCCCCCCCCCCCC
Q psy247 255 SGQFTDHQKVLYEIVLDTQLKLLKLCEKSDSALNFIYRYA--YVFQIGF-KFCPHHSSHYLGMDVHDCAAIPRTIPVAPG 331 (413)
Q Consensus 255 ~G~~~~~~~~~~~~~~~a~~~~~~~lkp~G~~~~ei~~~~--~~~~~g~-~~~~h~~GHgiGl~~~E~p~~~~~~~~~~g 331 (413)
|+++++|+++|+.+.++++.+++++|| |++++||++++ .+.+.|+ ++++|++||++|++.||.|.+.
T Consensus 99 -g~~~~~~~~~~~~~~~~~~~~~~~~~p-G~~~~di~~~~~~~~~~~g~~~~~~~~~Gh~iG~~~~e~p~i~-------- 168 (208)
T cd01092 99 -GEPSDELKEIYEIVLEAQQAAIKAVKP-GVTAKEVDKAARDVIEEAGYGEYFIHRTGHGVGLEVHEAPYIS-------- 168 (208)
T ss_pred -CCCCHHHHHHHHHHHHHHHHHHHHcCC-CCcHHHHHHHHHHHHHHcCccccCCCCCccccCcccCcCCCcC--------
Confidence 899999999999999999999999999 99999999998 6778887 5789999999999999999753
Q ss_pred cceecCCCCccccCCCCCCCCCCCCCcEEEeCCeeeEcCCCCCcccccccceEEEceeEEEeCCCC
Q psy247 332 VVFTVEPGMDVHDCAAIPRTIPVAPGMVFTVEPGVYISKDCKETRPEFRGMGIRIEDDILIDKSSN 397 (413)
Q Consensus 332 ~~~~~~pg~~~~~~~~~~~~~~L~~GMv~~iEPgi~~~~~~~~~~~~~~~~gvriED~vlVt~~G~ 397 (413)
.+++.+|++||||+|||++++++. +|+|+||+|+||++|+
T Consensus 169 ----------------~~~~~~l~~gmv~~iep~~~~~~~----------~g~~~ed~v~vt~~g~ 208 (208)
T cd01092 169 ----------------PGSDDVLEEGMVFTIEPGIYIPGK----------GGVRIEDDVLVTEDGC 208 (208)
T ss_pred ----------------CCCCCCcCCCCEEEECCeEEecCC----------CEEEeeeEEEECCCCC
Confidence 346789999999999999998775 7999999999999985
No 22
>cd01091 CDC68-like Related to aminopeptidase P and aminopeptidase M, a member of this domain family is present in cell division control protein 68, a transcription factor.
Probab=100.00 E-value=3.3e-41 Score=319.90 Aligned_cols=230 Identities=18% Similarity=0.257 Sum_probs=190.5
Q ss_pred HHHHHHHHHHHHHHHHHHHh-----ccCCC--CCHHHHHHHHHHHHHHcCCCCCCCCceeecCCCccccccccCCccccc
Q psy247 95 QEMMRETCRIASEGFKETIG-----FSKPG--RTEHELFTKFDYEVRMRGAQILAYPPVVASGDNANVIHYVHNNQKCCH 167 (413)
Q Consensus 95 i~~~r~A~~i~~~~~~~~~~-----~~~~G--~tE~el~~~~~~~~~~~G~~~~~~~~iv~sG~~~~~~~~~~~~~~~~~ 167 (413)
++.||+|+++++++|...+. .+.+| +|+.+|+..++..+.+.+.....+.+
T Consensus 1 ~~~~~~a~~~~~~~~~~~~~~~~~~~id~~~~~t~~~l~~~~e~~~~~~~~~~~~~~~---------------------- 58 (243)
T cd01091 1 LNNIKKASDATVDVLKKFFVDEVEEIIDQEKKVTHSKLSDKVEKAIEDKKKYKAKLDP---------------------- 58 (243)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHhCchhhhcCCCH----------------------
Confidence 46899999999999987666 78999 99999999999999877643100000
Q ss_pred CcceecccccCCCCCCHHHHHhhhHHHHHhhcccccCCCceeccCCCc-cccccccCCccccCCCEEEEecceeeCcEEe
Q psy247 168 GDLLLMDAGFSKPGRTEHELFTKFDYEVRMRGAQILAYPPVVASGDNA-NVIHYVHNNQKCCHGDLLLMDAGCELNGYDS 246 (413)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g~~~-~~~h~~~~~~~i~~Gd~v~iD~g~~~~GY~a 246 (413)
. .-..+|+|++++|.+. ..+|+.++++.++.|++|++|+|++|+|||+
T Consensus 59 -----------------~--------------~~~~~y~~iv~sG~~~~~l~h~~~s~~~~~~~~~vl~d~G~~y~gY~s 107 (243)
T cd01091 59 -----------------E--------------QLDWCYPPIIQSGGNYDLLKSSSSSDKLLYHFGVIICSLGARYKSYCS 107 (243)
T ss_pred -----------------H--------------HcCcccCCeEeECcCcccCCCCCCCccccCCCCEEEEEeCcccCCEee
Confidence 0 0124788888888888 7889999999999999999999999999999
Q ss_pred ceEEEEeecCCCCHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHH--HHHHcC--c-ccccccccccCCCCccCCCC
Q psy247 247 DITRTWPISGQFTDHQKVLYEIVLDTQLKLLKLCEKSDSALNFIYRYA--YVFQIG--F-KFCPHHSSHYLGMDVHDCAA 321 (413)
Q Consensus 247 DitRT~~v~G~~~~~~~~~~~~~~~a~~~~~~~lkp~G~~~~ei~~~~--~~~~~g--~-~~~~h~~GHgiGl~~~E~p~ 321 (413)
|++|||++ | |+++|+++|+.++++++++++++|| |+++++||+++ .+.+.+ + .+++|++||+||+++||.|.
T Consensus 108 ditRT~~v-~-p~~~~~~~y~~~~~a~~~~i~~lkp-G~~~~dv~~~a~~~i~~~~~~~~~~~~~~~GHgiGle~hE~~~ 184 (243)
T cd01091 108 NIARTFLI-D-PTSEQQKNYNFLLALQEEILKELKP-GAKLSDVYQKTLDYIKKKKPELEPNFTKNLGFGIGLEFRESSL 184 (243)
T ss_pred cceEEEEc-C-CCHHHHHHHHHHHHHHHHHHHHcCC-CCcHHHHHHHHHHHHHHhChhHHHhCcCCcccccCcccccCcc
Confidence 99999999 5 7999999999999999999999999 99999999998 555554 3 57899999999999999875
Q ss_pred CCCCCCCCCCcceecCCCCccccCCCCCCCCCCCCCcEEEeCCeeeEcCCCCCcccccccceEEEceeEEEeCCCCcccC
Q psy247 322 IPRTIPVAPGVVFTVEPGMDVHDCAAIPRTIPVAPGMVFTVEPGVYISKDCKETRPEFRGMGIRIEDDILIDKSSNVENL 401 (413)
Q Consensus 322 ~~~~~~~~~g~~~~~~pg~~~~~~~~~~~~~~L~~GMv~~iEPgi~~~~~~~~~~~~~~~~gvriED~vlVt~~G~~e~L 401 (413)
+.. ..++.+|++||||+||||+|.........++++.+|+||||||+||++|+.++|
T Consensus 185 ~l~-----------------------~~~~~~L~~GMvf~vepGi~~~~~~~~~~~~~~~~gv~ieDtV~Vt~~G~~~~L 241 (243)
T cd01091 185 IIN-----------------------AKNDRKLKKGMVFNLSIGFSNLQNPEPKDKESKTYALLLSDTILVTEDEPAIVL 241 (243)
T ss_pred ccC-----------------------CCCCCCcCCCCEEEEeCCcccccCccccCccCCeeEEEEEEEEEEcCCCCceec
Confidence 321 235789999999999999994333233445666789999999999999964677
Q ss_pred CC
Q psy247 402 SA 403 (413)
Q Consensus 402 t~ 403 (413)
|+
T Consensus 242 T~ 243 (243)
T cd01091 242 TN 243 (243)
T ss_pred CC
Confidence 74
No 23
>cd01085 APP X-Prolyl Aminopeptidase 2. E.C. 3.4.11.9. Also known as X-Pro aminopeptidase, proline aminopeptidase, aminopeptidase P, and aminoacylproline aminopeptidase. Catalyses release of any N-terminal amino acid, including proline, that is linked with proline, even from a dipeptide or tripeptide.
Probab=100.00 E-value=4.5e-40 Score=308.75 Aligned_cols=208 Identities=25% Similarity=0.372 Sum_probs=177.7
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCC--CCHHHHHHHHHHHHHHcCCCCCCCCceeecCCCccccccccCCcccccCcceec
Q psy247 96 EMMRETCRIASEGFKETIGFSKPG--RTEHELFTKFDYEVRMRGAQILAYPPVVASGDNANVIHYVHNNQKCCHGDLLLM 173 (413)
Q Consensus 96 ~~~r~A~~i~~~~~~~~~~~~~~G--~tE~el~~~~~~~~~~~G~~~~~~~~iv~sG~~~~~~~~~~~~~~~~~~~~~~~ 173 (413)
+.||.+..+ .+++..+.+.++|| +||.||++++++.+++.|..
T Consensus 5 ~~~~~~~~~-~~~~~~~~~~i~~G~~~tE~eiaa~~~~~~~~~g~~---------------------------------- 49 (224)
T cd01085 5 AHIRDGVAL-VEFLAWLEQEVPKGETITELSAADKLEEFRRQQKGY---------------------------------- 49 (224)
T ss_pred HHHHHHHHH-HHHHHHHHHHhccCCCEeHHHHHHHHHHHHHHcCCC----------------------------------
Confidence 356666666 48888899999999 99999999998776655421
Q ss_pred ccccCCCCCCHHHHHhhhHHHHHhhcccccCCCceeccCCCccccccccC---CccccCCCEEEEecceeeCcEEeceEE
Q psy247 174 DAGFSKPGRTEHELFTKFDYEVRMRGAQILAYPPVVASGDNANVIHYVHN---NQKCCHGDLLLMDAGCELNGYDSDITR 250 (413)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g~~~~~~h~~~~---~~~i~~Gd~v~iD~g~~~~GY~aDitR 250 (413)
...+|++++++|.|++++|+.|+ +++|++||+|++|+|+.|+||++|++|
T Consensus 50 ---------------------------~~~~f~~~v~~g~n~~~~H~~p~~~~~r~l~~GD~V~iD~g~~~~gY~aD~~R 102 (224)
T cd01085 50 ---------------------------VGLSFDTISGFGPNGAIVHYSPTEESNRKISPDGLYLIDSGGQYLDGTTDITR 102 (224)
T ss_pred ---------------------------cCCCcceEEEecCccCcCCCCcCcccCcccCCCCEEEEEeCccCCCcccccEE
Confidence 01357788888888889999998 899999999999999999999999999
Q ss_pred EEeecCCCCHHHHHHHHHHHHHHHHHHHhc-ccCCCCHHHHHHHH--HHHHcCcccccccccccCC--CCccCCCCCCCC
Q psy247 251 TWPISGQFTDHQKVLYEIVLDTQLKLLKLC-EKSDSALNFIYRYA--YVFQIGFKFCPHHSSHYLG--MDVHDCAAIPRT 325 (413)
Q Consensus 251 T~~v~G~~~~~~~~~~~~~~~a~~~~~~~l-kp~G~~~~ei~~~~--~~~~~g~~~~~h~~GHgiG--l~~~E~p~~~~~ 325 (413)
||++ |+++++|+++|+.+++++.++++.+ +| |+++.+|++++ .+.+.|+. +.|++||+|| +++||.|.++ .
T Consensus 103 T~~v-G~~~~~~~~~~~~~~~~~~~~~~~~~~~-G~~~~~v~~~~~~~~~~~g~~-~~h~~GHgIG~~l~~hE~P~i~-~ 178 (224)
T cd01085 103 TVHL-GEPTAEQKRDYTLVLKGHIALARAKFPK-GTTGSQLDALARQPLWKAGLD-YGHGTGHGVGSFLNVHEGPQSI-S 178 (224)
T ss_pred eecC-CCCCHHHHHHHHHHHHHHHHHHHHhcCC-CCCHHHHHHHHHHHHHHhCCC-CCCCCCCCCCCCCcCCCCCCcC-C
Confidence 9999 9999999999999999999999888 48 99999999998 56667765 5799999999 6899999853 0
Q ss_pred CCCCCCcceecCCCCccccCCCCCCCCCCCCCcEEEeCCeeeEcCCCCCcccccccceEEEceeEEEeCCCCcccC
Q psy247 326 IPVAPGVVFTVEPGMDVHDCAAIPRTIPVAPGMVFTVEPGVYISKDCKETRPEFRGMGIRIEDDILIDKSSNVENL 401 (413)
Q Consensus 326 ~~~~~g~~~~~~pg~~~~~~~~~~~~~~L~~GMv~~iEPgi~~~~~~~~~~~~~~~~gvriED~vlVt~~G~~e~L 401 (413)
. .+++.+|++||||+|||++|+++. +|+|+||+|+||++|+ ..+
T Consensus 179 ~---------------------~~~~~~L~~GmvftiEP~iy~~g~----------~gvried~v~Vt~~G~-~~~ 222 (224)
T cd01085 179 P---------------------APNNVPLKAGMILSNEPGYYKEGK----------YGIRIENLVLVVEAET-TEF 222 (224)
T ss_pred c---------------------CCCCCCcCCCCEEEECCEeEeCCC----------eEEEeeEEEEEeeCCc-CCC
Confidence 0 235789999999999999999875 7999999999999998 543
No 24
>PF00557 Peptidase_M24: Metallopeptidase family M24 This Prosite entry corresponds to sub-family M24B This Prosite entry corresponds to sub-families M24A and M24C; InterPro: IPR000994 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This entry contains proteins that belong to MEROPS peptidase family M24 (clan MG), which share a common structural-fold, the "pita-bread" fold. The fold contains both alpha helices and an anti-parallel beta sheet within two structurally similar domains that are thought to be derived from an ancient gene duplication. The active site, where conserved, is located between the two domains. The fold is common to methionine aminopeptidase (3.4.11.18 from EC), aminopeptidase P (3.4.11.9 from EC), prolidase (3.4.13.9 from EC), agropine synthase and creatinase (3.5.3.3 from EC). Though many of these peptidases require a divalent cation, creatinase is not a metal-dependent enzyme [, , ]. The entry also contains proteins that have lost catalytic activity, for example Spt16, which is a component of the FACT complex. The crystal structure of the N-terminal domain of Spt16, determined to 2.1A, reveals an aminopeptidase P fold whose enzymatic activity has been lost. This fold binds directly to histones H3-H4 through a interaction with their globular core domains, as well as with their N-terminal tails []. The FACT complex is a stable heterodimer in Saccharomyces cerevisiae (Baker's yeast) comprising Spt16p (P32558 from SWISSPROT, IPR013953 from INTERPRO) and Pob3p (Q04636 from SWISSPROT, IPR000969 from INTERPRO). The complex plays a role in transcription initiation and promotes binding of TATA-binding protein (TBP) to a TATA box in chromatin []; it also facilitates RNA Polymerase II transcription elongation through nucleosomes by destabilising and then reassembling nucleosome structure [, , ]. ; GO: 0009987 cellular process; PDB: 4A6V_B 4A6W_A 3CTZ_A 3IG4_B 2B3H_A 2NQ6_A 2NQ7_A 2GZ5_A 2G6P_A 2B3L_A ....
Probab=100.00 E-value=1.6e-38 Score=294.38 Aligned_cols=201 Identities=30% Similarity=0.544 Sum_probs=175.0
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCCCHHHHHHHHHHH-HHHcCCCCCCCCceeecCCCccccccccCCcccccCcceecc
Q psy247 96 EMMRETCRIASEGFKETIGFSKPGRTEHELFTKFDYE-VRMRGAQILAYPPVVASGDNANVIHYVHNNQKCCHGDLLLMD 174 (413)
Q Consensus 96 ~~~r~A~~i~~~~~~~~~~~~~~G~tE~el~~~~~~~-~~~~G~~~~~~~~iv~sG~~~~~~~~~~~~~~~~~~~~~~~~ 174 (413)
++||+|++++++++.++++.++|||||.||.+.+.+. +.++|....+
T Consensus 1 e~~R~a~~i~~~~~~~~~~~~~~G~te~ei~~~~~~~~~~~~g~~~~~-------------------------------- 48 (207)
T PF00557_consen 1 ECMRKAARIADAAMEAAMEALRPGMTEYEIAAAIERAMLRRHGGEEPA-------------------------------- 48 (207)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSTTCBHHHHHHHHHHHHHHHTTTTEES--------------------------------
T ss_pred CHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHHcCCCccc--------------------------------
Confidence 6899999999999999999999999999999999988 5666755444
Q ss_pred cccCCCCCCHHHHHhhhHHHHHhhcccccCCCceeccCCCccccccccCCccccCCCEEEEecceeeCcEEeceEEEEee
Q psy247 175 AGFSKPGRTEHELFTKFDYEVRMRGAQILAYPPVVASGDNANVIHYVHNNQKCCHGDLLLMDAGCELNGYDSDITRTWPI 254 (413)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g~~~~~~h~~~~~~~i~~Gd~v~iD~g~~~~GY~aDitRT~~v 254 (413)
|++++++|.|+..+|+.|++++|++||+|.+|+|+.|+||++|++||+++
T Consensus 49 ------------------------------~~~~~~~g~~~~~~~~~~~~~~l~~gd~v~id~~~~~~gy~~d~~Rt~~~ 98 (207)
T PF00557_consen 49 ------------------------------FPPIVGSGPNTDLPHYTPTDRRLQEGDIVIIDFGPRYDGYHADIARTFVV 98 (207)
T ss_dssp ------------------------------SESEEEECCCCGETTTBCCSSBESTTEEEEEEEEEEETTEEEEEEEEEES
T ss_pred ------------------------------CCceEecCCcceecceeccceeeecCCcceeeccceeeeeEeeeeeEEEE
Confidence 45556666667777888888999999999999999999999999999999
Q ss_pred cCCCCHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHH--HHHHcCc-ccccccccccCCCCccCC-CCCCCCCCCCC
Q psy247 255 SGQFTDHQKVLYEIVLDTQLKLLKLCEKSDSALNFIYRYA--YVFQIGF-KFCPHHSSHYLGMDVHDC-AAIPRTIPVAP 330 (413)
Q Consensus 255 ~G~~~~~~~~~~~~~~~a~~~~~~~lkp~G~~~~ei~~~~--~~~~~g~-~~~~h~~GHgiGl~~~E~-p~~~~~~~~~~ 330 (413)
| ++++|+++|+.++++++.+++++|| |++++||++++ .+.+.|+ .+++|.+||+||+++||. |.+..
T Consensus 99 -G-~~~~~~~~~~~~~~~~~~~~~~~~p-G~~~~~v~~~~~~~~~~~g~~~~~~~~~GH~iG~~~~~~~P~i~~------ 169 (207)
T PF00557_consen 99 -G-PTPEQRRAYEAAREALEAAIEALRP-GVTGSDVYEAVREVLEEYGLEEPYPHGLGHGIGLEFHEPGPNIAR------ 169 (207)
T ss_dssp -S-SHHHHHHHHHHHHHHHHHHHHH-ST-TSBHHHHHHHHHHHHHHTTEGEEBTSSSEEEESSSSSEEEEEESS------
T ss_pred -e-ecccccchhhhhHHHHHhHhhhccc-ccccchhhHHHHHHHHhhcccceeeecccccccccccccceeeec------
Confidence 8 9999999999999999999999999 99999999999 6778898 788999999999999997 87531
Q ss_pred CcceecCCCCccccCCCCCCCCCCCCCcEEEeCCeeeEc-CCCCCcccccccceEEEceeEEEeC
Q psy247 331 GVVFTVEPGMDVHDCAAIPRTIPVAPGMVFTVEPGVYIS-KDCKETRPEFRGMGIRIEDDILIDK 394 (413)
Q Consensus 331 g~~~~~~pg~~~~~~~~~~~~~~L~~GMv~~iEPgi~~~-~~~~~~~~~~~~~gvriED~vlVt~ 394 (413)
.+++.+|++||||+|||+++.. +. +|+++||+|+|||
T Consensus 170 -----------------~~~~~~l~~gmv~~iep~~~~~~~~----------~g~~~ed~v~Vte 207 (207)
T PF00557_consen 170 -----------------PGDDTVLEPGMVFAIEPGLYFIPGW----------GGVRFEDTVLVTE 207 (207)
T ss_dssp -----------------TTTSSB--TTBEEEEEEEEEEETTS----------EEEEEBEEEEEES
T ss_pred -----------------ccccceecCCCceeEeeeEEccCCC----------cEEEEEEEEEECc
Confidence 2468999999999999999954 43 5999999999996
No 25
>cd01066 APP_MetAP A family including aminopeptidase P, aminopeptidase M, and prolidase. Also known as metallopeptidase family M24. This family of enzymes is able to cleave amido-, imido- and amidino-containing bonds. Members exibit relatively narrow substrate specificity compared to other metallo-aminopeptidases, suggesting they play roles in regulation of biological processes rather than general protein degradation.
Probab=100.00 E-value=1.1e-37 Score=286.40 Aligned_cols=204 Identities=30% Similarity=0.506 Sum_probs=182.9
Q ss_pred HHHHHHHHHHHHHHHHHHHhccCCCCCHHHHHHHHHHHHHHcCCCCCCCCceeecCCCccccccccCCcccccCcceecc
Q psy247 95 QEMMRETCRIASEGFKETIGFSKPGRTEHELFTKFDYEVRMRGAQILAYPPVVASGDNANVIHYVHNNQKCCHGDLLLMD 174 (413)
Q Consensus 95 i~~~r~A~~i~~~~~~~~~~~~~~G~tE~el~~~~~~~~~~~G~~~~~~~~iv~sG~~~~~~~~~~~~~~~~~~~~~~~~ 174 (413)
|+.||+|++++++++..+.+.++||+||.|+.+.+.+.+.++|+ ...+.+
T Consensus 1 i~~~r~a~~i~~~~~~~~~~~~~~G~te~ei~~~~~~~~~~~g~-~~~~~~----------------------------- 50 (207)
T cd01066 1 IARLRKAAEIAEAAMAAAAEAIRPGVTEAEVAAAIEQALRAAGG-YPAGPT----------------------------- 50 (207)
T ss_pred CHHHHHHHHHHHHHHHHHHHHCcCCCCHHHHHHHHHHHHHHcCC-CCCCCc-----------------------------
Confidence 57899999999999999999999999999999999999999987 233444
Q ss_pred cccCCCCCCHHHHHhhhHHHHHhhcccccCCCceeccCCCccccccccCCccccCCCEEEEecceeeCcEEeceEEEEee
Q psy247 175 AGFSKPGRTEHELFTKFDYEVRMRGAQILAYPPVVASGDNANVIHYVHNNQKCCHGDLLLMDAGCELNGYDSDITRTWPI 254 (413)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g~~~~~~h~~~~~~~i~~Gd~v~iD~g~~~~GY~aDitRT~~v 254 (413)
++++|.++..+|+.|+++++++||+|++|+|+.|+||++|++||+++
T Consensus 51 ---------------------------------~v~~g~~~~~~h~~~~~~~i~~gd~v~~d~g~~~~gy~~d~~rt~~~ 97 (207)
T cd01066 51 ---------------------------------IVGSGARTALPHYRPDDRRLQEGDLVLVDLGGVYDGYHADLTRTFVI 97 (207)
T ss_pred ---------------------------------EEEECccccCcCCCCCCCCcCCCCEEEEEeceeECCCccceeceeEc
Confidence 44555555667888888899999999999999999999999999999
Q ss_pred cCCCCHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHH--HHHHcCc-ccccccccccCCCCccCCCCCCCCCCCCCC
Q psy247 255 SGQFTDHQKVLYEIVLDTQLKLLKLCEKSDSALNFIYRYA--YVFQIGF-KFCPHHSSHYLGMDVHDCAAIPRTIPVAPG 331 (413)
Q Consensus 255 ~G~~~~~~~~~~~~~~~a~~~~~~~lkp~G~~~~ei~~~~--~~~~~g~-~~~~h~~GHgiGl~~~E~p~~~~~~~~~~g 331 (413)
|+++++|+++|+.+.++++.+++++|| |+++.|+++++ .+.+.|+ .++.|.+||++|++.||.|.+.
T Consensus 98 -g~~~~~~~~~~~~~~~~~~~~~~~i~p-G~~~~ei~~~~~~~~~~~g~~~~~~~~~Gh~iG~~~~e~~~~~-------- 167 (207)
T cd01066 98 -GEPSDEQRELYEAVREAQEAALAALRP-GVTAEEVDAAAREVLEEHGLGPNFGHRTGHGIGLEIHEPPVLK-------- 167 (207)
T ss_pred -CCCCHHHHHHHHHHHHHHHHHHHHhcC-CCcHHHHHHHHHHHHHHcCccccCCCCCccccCcccCCCCCcC--------
Confidence 899999999999999999999999999 99999999999 6777887 6789999999999999998742
Q ss_pred cceecCCCCccccCCCCCCCCCCCCCcEEEeCCeeeEcCCCCCcccccccceEEEceeEEEeCCCC
Q psy247 332 VVFTVEPGMDVHDCAAIPRTIPVAPGMVFTVEPGVYISKDCKETRPEFRGMGIRIEDDILIDKSSN 397 (413)
Q Consensus 332 ~~~~~~pg~~~~~~~~~~~~~~L~~GMv~~iEPgi~~~~~~~~~~~~~~~~gvriED~vlVt~~G~ 397 (413)
...+.+|++||||+|||+++.++. +|+++||+|+||++|+
T Consensus 168 ----------------~~~~~~l~~gmv~~iep~~~~~~~----------~g~~~ed~v~vt~~g~ 207 (207)
T cd01066 168 ----------------AGDDTVLEPGMVFAVEPGLYLPGG----------GGVRIEDTVLVTEDGP 207 (207)
T ss_pred ----------------CCCCCCcCCCCEEEECCEEEECCC----------cEEEeeeEEEEeCCCC
Confidence 345789999999999999998864 7999999999999985
No 26
>COG0024 Map Methionine aminopeptidase [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=2.8e-36 Score=283.28 Aligned_cols=237 Identities=24% Similarity=0.330 Sum_probs=209.2
Q ss_pred ccCCHHHHHHHHHHHHHHHHHHHHHHhccCCCCCHHHHHHHHHHHHHHcCCCCCCCCceeecCCCccccccccCCccccc
Q psy247 88 LYKSDSEQEMMRETCRIASEGFKETIGFSKPGRTEHELFTKFDYEVRMRGAQILAYPPVVASGDNANVIHYVHNNQKCCH 167 (413)
Q Consensus 88 ~vKs~~Ei~~~r~A~~i~~~~~~~~~~~~~~G~tE~el~~~~~~~~~~~G~~~~~~~~iv~sG~~~~~~~~~~~~~~~~~ 167 (413)
.+|+++||+.||+|++|+.+++..+.+.++||+|..||....+..++++|+.. ++.
T Consensus 4 ~ikt~~eiek~r~Ag~i~a~~l~~~~~~v~pGvtt~Eld~~~~~~i~~~ga~p-a~~----------------------- 59 (255)
T COG0024 4 SIKTPEEIEKMREAGKIAAKALKEVASLVKPGVTTLELDEIAEEFIREKGAYP-AFL----------------------- 59 (255)
T ss_pred ccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHcCcee-hhc-----------------------
Confidence 38999999999999999999999999999999999999999999999987652 110
Q ss_pred CcceecccccCCCCCCHHHHHhhhHHHHHhhcccccCCCceeccCCCccccccccC-CccccCCCEEEEecceeeCcEEe
Q psy247 168 GDLLLMDAGFSKPGRTEHELFTKFDYEVRMRGAQILAYPPVVASGDNANVIHYVHN-NQKCCHGDLLLMDAGCELNGYDS 246 (413)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g~~~~~~h~~~~-~~~i~~Gd~v~iD~g~~~~GY~a 246 (413)
.+.+|+..+|.+.|..+.|+.|+ +++|++||+|.||+|+.++||++
T Consensus 60 ---------------------------------gy~g~~~~~ciSvNe~v~HgiP~d~~vlk~GDiv~IDvg~~~dG~~~ 106 (255)
T COG0024 60 ---------------------------------GYKGFPFPTCISVNEVVAHGIPGDKKVLKEGDIVKIDVGAHIDGYIG 106 (255)
T ss_pred ---------------------------------cCcCCCcceEeehhheeeecCCCCCcccCCCCEEEEEEEEEECCeee
Confidence 13458889999999999999998 57899999999999999999999
Q ss_pred ceEEEEeecCCCC-HHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHH--HHHHcCcccccccccccCCCCccCCCCCC
Q psy247 247 DITRTWPISGQFT-DHQKVLYEIVLDTQLKLLKLCEKSDSALNFIYRYA--YVFQIGFKFCPHHSSHYLGMDVHDCAAIP 323 (413)
Q Consensus 247 DitRT~~v~G~~~-~~~~~~~~~~~~a~~~~~~~lkp~G~~~~ei~~~~--~~~~~g~~~~~h~~GHgiGl~~~E~p~~~ 323 (413)
|.++|+.+ |+.+ +..+++.+++.++..++++++|| |++.++|-+++ ++.+.|+......+||+||..+||.|.++
T Consensus 107 Dsa~T~~v-g~~~~~~~~~L~~~t~eal~~~I~~vkp-G~~l~~Ig~aIq~~~~~~G~~vVr~~~GHgig~~~He~p~ip 184 (255)
T COG0024 107 DTAITFVV-GEVSDEDAKRLLEATKEALYAGIEAVKP-GARLGDIGRAIQEYAESRGFSVVRNLTGHGIGRELHEEPSIP 184 (255)
T ss_pred eEEEEEEC-CCCChHHHHHHHHHHHHHHHHHHHhccC-CCCHHHHHHHHHHHHHHcCCEEeecccCCccCcccCCCCeec
Confidence 99999999 7655 47777999999999999999999 99999999999 56688987778889999999999999998
Q ss_pred CCCCCCCCcceecCCCCccccCCCCCCCCCCCCCcEEEeCCeeeEcC--------CCCCcccccccceEEEceeEEEeCC
Q psy247 324 RTIPVAPGVVFTVEPGMDVHDCAAIPRTIPVAPGMVFTVEPGVYISK--------DCKETRPEFRGMGIRIEDDILIDKS 395 (413)
Q Consensus 324 ~~~~~~~g~~~~~~pg~~~~~~~~~~~~~~L~~GMv~~iEPgi~~~~--------~~~~~~~~~~~~gvriED~vlVt~~ 395 (413)
++.. .....+|+|||||+|||.+.... +.|...++.++...++|.||+||++
T Consensus 185 ~y~~--------------------~~~~~~l~~Gmv~aIEPmi~~G~~~~~~~~~d~Wt~~t~d~~~~aq~EHTv~Vt~~ 244 (255)
T COG0024 185 NYGK--------------------DGTGVRLKEGMVFAIEPMINTGSGEVVEGPSDRWTLVTKDGSLSAQFEHTVIVTED 244 (255)
T ss_pred cccC--------------------CCCCcccCCCCEEEEeeEEEcCCCceEecCCCCeEEEeCCCCEEeEEEEEEEEeCC
Confidence 7532 22347999999999999997552 4577888888899999999999999
Q ss_pred CCcccCCCC
Q psy247 396 SNVENLSAM 404 (413)
Q Consensus 396 G~~e~Lt~~ 404 (413)
|+ ++||..
T Consensus 245 g~-eilT~~ 252 (255)
T COG0024 245 GC-EILTLR 252 (255)
T ss_pred Cc-EEeeCC
Confidence 99 999984
No 27
>cd01089 PA2G4-like Related to aminopepdidase M, this family contains proliferation-associated protein 2G4. Family members have been implicated in cell cycle control.
Probab=100.00 E-value=6e-36 Score=281.85 Aligned_cols=213 Identities=16% Similarity=0.213 Sum_probs=175.2
Q ss_pred HHHHHHHHHHHHHHHHHHHhccCCCCCHHHHHHHHHHHHHHcCCCCCCCCceeecCCCccccccccCCcccccCcceecc
Q psy247 95 QEMMRETCRIASEGFKETIGFSKPGRTEHELFTKFDYEVRMRGAQILAYPPVVASGDNANVIHYVHNNQKCCHGDLLLMD 174 (413)
Q Consensus 95 i~~~r~A~~i~~~~~~~~~~~~~~G~tE~el~~~~~~~~~~~G~~~~~~~~iv~sG~~~~~~~~~~~~~~~~~~~~~~~~ 174 (413)
+++||+|++|+++++..+.+.++||+||.||...++..+....... |..
T Consensus 1 ~~~~r~A~~I~~~~~~~~~~~i~pG~te~ei~~~~e~~i~~~~~~~--~~~----------------------------- 49 (228)
T cd01089 1 VTKYKTAGQIANKVLKQVISLCVPGAKVVDLCEKGDKLILEELGKV--YKK----------------------------- 49 (228)
T ss_pred CHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHhhccc--ccC-----------------------------
Confidence 3689999999999999999999999999999888887777653221 100
Q ss_pred cccCCCCCCHHHHHhhhHHHHHhhcccccCCCceeccCCCcccccccc----CCccccCCCEEEEecceeeCcEEeceEE
Q psy247 175 AGFSKPGRTEHELFTKFDYEVRMRGAQILAYPPVVASGDNANVIHYVH----NNQKCCHGDLLLMDAGCELNGYDSDITR 250 (413)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g~~~~~~h~~~----~~~~i~~Gd~v~iD~g~~~~GY~aDitR 250 (413)
...+..+.+|+++++ .|+..+|+.| ++++|++||+|++|+|+.|+||++|++|
T Consensus 50 ---------------------~~~g~~g~~~~~~v~--~n~~~~H~~p~~~~~~~~l~~Gd~v~iD~g~~~~GY~sD~tR 106 (228)
T cd01089 50 ---------------------EKKLEKGIAFPTCIS--VNNCVCHFSPLKSDATYTLKDGDVVKIDLGCHIDGYIAVVAH 106 (228)
T ss_pred ---------------------cccccCCCCcCeEec--cCceeecCCCCCCCCCcccCCCCEEEEEEEEEECCEEEEEEE
Confidence 001223446766666 4778889985 7889999999999999999999999999
Q ss_pred EEeecCCCCH-----HHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHH--HHHHcCc----ccccccccccCCCCccCC
Q psy247 251 TWPISGQFTD-----HQKVLYEIVLDTQLKLLKLCEKSDSALNFIYRYA--YVFQIGF----KFCPHHSSHYLGMDVHDC 319 (413)
Q Consensus 251 T~~v~G~~~~-----~~~~~~~~~~~a~~~~~~~lkp~G~~~~ei~~~~--~~~~~g~----~~~~h~~GHgiGl~~~E~ 319 (413)
||++ |++++ +++++|+.++++++++++++|| |++++||++++ .+.+.|+ .++.|++||+++ .++.
T Consensus 107 T~~v-G~~~~~~~~~~~~~~~~~~~ea~~~~~~~~kp-G~~~~dv~~a~~~~~~~~G~~~~~~~~~h~~g~~~~--~~~~ 182 (228)
T cd01089 107 TIVV-GAEAETPVTGKKADVIAAAHYALEAALRLLRP-GNQNSDITEAIQKVIVDYGCTPVEGVLSHQLKRVVS--SGEG 182 (228)
T ss_pred EEEe-CCcCccccchHHHHHHHHHHHHHHHHHHHhCC-CCcHHHHHHHHHHHHHHcCCEEecCccccCcCceEe--cCCC
Confidence 9999 88874 8999999999999999999999 99999999999 7788884 466777788443 3332
Q ss_pred CCCCCCCCCCCCcceecCCCCccccCCCCCCCCCCCCCcEEEeCCeeeEcCCCCCcccccccceEEEceeEEEeCCCCcc
Q psy247 320 AAIPRTIPVAPGVVFTVEPGMDVHDCAAIPRTIPVAPGMVFTVEPGVYISKDCKETRPEFRGMGIRIEDDILIDKSSNVE 399 (413)
Q Consensus 320 p~~~~~~~~~~g~~~~~~pg~~~~~~~~~~~~~~L~~GMv~~iEPgi~~~~~~~~~~~~~~~~gvriED~vlVt~~G~~e 399 (413)
+. .-..+|++||||++||+++.++. +++++||||+||++|+ |
T Consensus 183 ~~---------------------------~~~~~l~~gmvf~~ep~~~~~g~----------~~~~~~~Tv~vt~~G~-e 224 (228)
T cd01089 183 KA---------------------------KLVECVKHGLLFPYPVLYEKEGE----------VVAQFKLTVLLTPNGV-T 224 (228)
T ss_pred Cc---------------------------cchhhccCCcccccceeEccCCC----------eEEEEEEEEEEcCCCC-e
Confidence 21 12578999999999999999886 7899999999999999 9
Q ss_pred cCCC
Q psy247 400 NLSA 403 (413)
Q Consensus 400 ~Lt~ 403 (413)
.||.
T Consensus 225 ~lt~ 228 (228)
T cd01089 225 VLTG 228 (228)
T ss_pred eCCC
Confidence 9983
No 28
>KOG2738|consensus
Probab=100.00 E-value=2.8e-35 Score=273.90 Aligned_cols=242 Identities=21% Similarity=0.292 Sum_probs=215.4
Q ss_pred HccCCHHHHHHHHHHHHHHHHHHHHHHhccCCCCCHHHHHHHHHHHHHHcCCCCCCCCceeecCCCccccccccCCcccc
Q psy247 87 RLYKSDSEQEMMRETCRIASEGFKETIGFSKPGRTEHELFTKFDYEVRMRGAQILAYPPVVASGDNANVIHYVHNNQKCC 166 (413)
Q Consensus 87 R~vKs~~Ei~~~r~A~~i~~~~~~~~~~~~~~G~tE~el~~~~~~~~~~~G~~~~~~~~iv~sG~~~~~~~~~~~~~~~~ 166 (413)
-.|.++++|+.||+|++++.+.+..+...++||+|..||...++.++.++|+....
T Consensus 114 i~i~~~e~ie~mR~ac~LarevLd~Aa~~v~PgvTTdEiD~~VH~a~Ierg~YPSP------------------------ 169 (369)
T KOG2738|consen 114 IKILDPEGIEGMRKACRLAREVLDYAATLVRPGVTTDEIDRAVHNAIIERGAYPSP------------------------ 169 (369)
T ss_pred eeccCHHHHHHHHHHHHHHHHHHHHHhhhcCCCccHHHHHHHHHHHHHhcCCcCCC------------------------
Confidence 45789999999999999999999999999999999999999999999999975210
Q ss_pred cCcceecccccCCCCCCHHHHHhhhHHHHHhhcccccCCCceeccCCCccccccccCCccccCCCEEEEecceeeCcEEe
Q psy247 167 HGDLLLMDAGFSKPGRTEHELFTKFDYEVRMRGAQILAYPPVVASGDNANVIHYVHNNQKCCHGDLLLMDAGCELNGYDS 246 (413)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g~~~~~~h~~~~~~~i~~Gd~v~iD~g~~~~GY~a 246 (413)
..|..||-.+|++.|.++.|+.|..|+|++||+|.||+..-++||++
T Consensus 170 ---------------------------------LnYy~FPKS~CTSVNEviCHGIPD~RpLedGDIvNiDVtvY~~GyHG 216 (369)
T KOG2738|consen 170 ---------------------------------LNYYGFPKSVCTSVNEVICHGIPDSRPLEDGDIVNIDVTVYLNGYHG 216 (369)
T ss_pred ---------------------------------cccCCCchhhhcchhheeecCCCCcCcCCCCCEEeEEEEEEeccccC
Confidence 12568999999999999999999999999999999999999999999
Q ss_pred ceEEEEeecCCCCHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHH--HHHHcCcccccccccccCCCCccCCCCCCC
Q psy247 247 DITRTWPISGQFTDHQKVLYEIVLDTQLKLLKLCEKSDSALNFIYRYA--YVFQIGFKFCPHHSSHYLGMDVHDCAAIPR 324 (413)
Q Consensus 247 DitRT~~v~G~~~~~~~~~~~~~~~a~~~~~~~lkp~G~~~~ei~~~~--~~~~~g~~~~~h~~GHgiGl~~~E~p~~~~ 324 (413)
|..+||++ |+.+++.+++.+...++.+.+++.+|| |++.++|-..+ ...+.|+......+|||||--.|-.|.++.
T Consensus 217 DlneTffv-G~Vde~~k~LVkvT~EcL~kaI~~~kp-Gv~freiG~iI~kha~~~g~sVVr~ycGHGig~~FH~~PnipH 294 (369)
T KOG2738|consen 217 DLNETFFV-GNVDEKAKKLVKVTRECLEKAIAIVKP-GVSFREIGNIIQKHATKNGYSVVRSYCGHGIGRVFHCAPNIPH 294 (369)
T ss_pred ccccceEe-eccCHHHHHHHHHHHHHHHHHHHHhCC-chhHHHHHHHHHHHhhhcCceeehhhhccccccccccCCCchh
Confidence 99999999 999999999999999999999999999 99999999988 455678877788899999999999999875
Q ss_pred CCCCCCCcceecCCCCccccCCCCCCCCCCCCCcEEEeCCeeeEcC-------CCCCcccccccceEEEceeEEEeCCCC
Q psy247 325 TIPVAPGVVFTVEPGMDVHDCAAIPRTIPVAPGMVFTVEPGVYISK-------DCKETRPEFRGMGIRIEDDILIDKSSN 397 (413)
Q Consensus 325 ~~~~~~g~~~~~~pg~~~~~~~~~~~~~~L~~GMv~~iEPgi~~~~-------~~~~~~~~~~~~gvriED~vlVt~~G~ 397 (413)
+.. .....++.+||+|||||.+.+.. ++|...+..++...++|.|+|||++|+
T Consensus 295 ya~--------------------n~a~GvM~~G~tFTIEPmit~G~~~d~tWPD~WT~vTaDG~~sAQFEhTlLVT~tG~ 354 (369)
T KOG2738|consen 295 YAK--------------------NKAPGVMKPGQTFTIEPMITIGTWEDITWPDDWTAVTADGKRSAQFEHTLLVTETGC 354 (369)
T ss_pred hcc--------------------cCCcceeecCceEEeeeeecccccccccCCCCceEEecCCceecceeeEEEEecccc
Confidence 421 12356889999999999998763 467777777778899999999999999
Q ss_pred cccCCCCCCCC
Q psy247 398 VENLSAMCPKN 408 (413)
Q Consensus 398 ~e~Lt~~~p~~ 408 (413)
|+||+..|..
T Consensus 355 -EILT~r~~~~ 364 (369)
T KOG2738|consen 355 -EILTKRLPNS 364 (369)
T ss_pred -eehhcccCCC
Confidence 9999865654
No 29
>PRK08671 methionine aminopeptidase; Provisional
Probab=100.00 E-value=7.3e-32 Score=262.69 Aligned_cols=183 Identities=23% Similarity=0.297 Sum_probs=158.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHhccCCCCCHHHHHHHHHHHHHHcCCCCCCCCceeecCCCccccccccCCcccccCcceec
Q psy247 94 EQEMMRETCRIASEGFKETIGFSKPGRTEHELFTKFDYEVRMRGAQILAYPPVVASGDNANVIHYVHNNQKCCHGDLLLM 173 (413)
Q Consensus 94 Ei~~~r~A~~i~~~~~~~~~~~~~~G~tE~el~~~~~~~~~~~G~~~~~~~~iv~sG~~~~~~~~~~~~~~~~~~~~~~~ 173 (413)
+|++||+|++|+++++..+.+.++||+||.||.+.++..++++|+. .+|+++++.|
T Consensus 1 ~i~~~r~A~~I~~~~~~~~~~~i~pG~se~ei~~~~~~~i~~~g~~-~afp~~vs~n----------------------- 56 (291)
T PRK08671 1 ELEKYLEAGKIASKVREEAAKLIKPGAKLLDVAEFVENRIRELGAK-PAFPCNISIN----------------------- 56 (291)
T ss_pred CHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHcCCc-cCCCCEEeeC-----------------------
Confidence 5899999999999999999999999999999999999999999864 4555444332
Q ss_pred ccccCCCCCCHHHHHhhhHHHHHhhcccccCCCceeccCCCccccccccC---CccccCCCEEEEecceeeCcEEeceEE
Q psy247 174 DAGFSKPGRTEHELFTKFDYEVRMRGAQILAYPPVVASGDNANVIHYVHN---NQKCCHGDLLLMDAGCELNGYDSDITR 250 (413)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g~~~~~~h~~~~---~~~i~~Gd~v~iD~g~~~~GY~aDitR 250 (413)
...+||.|+ ++.|++||+|.+|+|+.|+||++|++|
T Consensus 57 -----------------------------------------~~~~H~~p~~~d~~~l~~GDvV~iD~G~~~dGY~aD~ar 95 (291)
T PRK08671 57 -----------------------------------------EVAAHYTPSPGDERVFPEGDVVKLDLGAHVDGYIADTAV 95 (291)
T ss_pred -----------------------------------------CCccCCCCCCCCCcccCCCCEEEEEEeEEECCEEEEEEE
Confidence 224577765 578999999999999999999999999
Q ss_pred EEeecCCCCHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHH--HHHHcCcccccccccccCCC-CccCCCCCCCCCC
Q psy247 251 TWPISGQFTDHQKVLYEIVLDTQLKLLKLCEKSDSALNFIYRYA--YVFQIGFKFCPHHSSHYLGM-DVHDCAAIPRTIP 327 (413)
Q Consensus 251 T~~v~G~~~~~~~~~~~~~~~a~~~~~~~lkp~G~~~~ei~~~~--~~~~~g~~~~~h~~GHgiGl-~~~E~p~~~~~~~ 327 (413)
|+++ | ++++++++++.++++++++++|| |++++||++++ .+.+.|+....|.+||+||+ .+|+.|.+++..
T Consensus 96 T~~v-G---~~~~~l~~a~~~a~~aai~~ikp-G~~~~dv~~~i~~vi~~~G~~~~~~~~GHgiG~~~~he~p~ip~~~- 169 (291)
T PRK08671 96 TVDL-G---GKYEDLVEASEEALEAAIEVVRP-GVSVGEIGRVIEETIRSYGFKPIRNLTGHGLERYELHAGPSIPNYD- 169 (291)
T ss_pred EEEe-C---hhHHHHHHHHHHHHHHHHHHhcC-CCCHHHHHHHHHHHHHHcCCcccCCCcccCcCCCcccCCCccCccC-
Confidence 9999 6 57899999999999999999999 99999999998 77788886667999999996 899999875321
Q ss_pred CCCCcceecCCCCccccCCCCCCCCCCCCCcEEEeCCeee
Q psy247 328 VAPGVVFTVEPGMDVHDCAAIPRTIPVAPGMVFTVEPGVY 367 (413)
Q Consensus 328 ~~~g~~~~~~pg~~~~~~~~~~~~~~L~~GMv~~iEPgi~ 367 (413)
.+++.+|++||||+|||.+.
T Consensus 170 --------------------~~~~~~le~GmV~aIEp~~t 189 (291)
T PRK08671 170 --------------------EGGGVKLEEGDVYAIEPFAT 189 (291)
T ss_pred --------------------CCCCceeCCCCEEEEcceEE
Confidence 24578999999999999764
No 30
>TIGR00501 met_pdase_II methionine aminopeptidase, type II. Methionine aminopeptidase (map) is a cobalt-binding enzyme. Bacterial and organellar examples (type I) differ from eukaroytic and archaeal (type II) examples in lacking a region of approximately 60 amino acids between the 4th and 5th cobalt-binding ligands. The role of this protein in general is to produce the mature amino end of cytosolic proteins by removing the N-terminal methionine. This model describes type II, among which the eukaryotic members typically have an N-terminal extension not present in archaeal members. It can act cotranslationally. The enzyme from rat has been shown to associate with translation initiation factor 2 (IF-2) and may have a role in translational regulation.
Probab=99.98 E-value=5.2e-31 Score=256.99 Aligned_cols=184 Identities=21% Similarity=0.255 Sum_probs=157.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhccCCCCCHHHHHHHHHHHHHHcCCCCCCCCceeecCCCccccccccCCcccccCcce
Q psy247 92 DSEQEMMRETCRIASEGFKETIGFSKPGRTEHELFTKFDYEVRMRGAQILAYPPVVASGDNANVIHYVHNNQKCCHGDLL 171 (413)
Q Consensus 92 ~~Ei~~~r~A~~i~~~~~~~~~~~~~~G~tE~el~~~~~~~~~~~G~~~~~~~~iv~sG~~~~~~~~~~~~~~~~~~~~~ 171 (413)
-+||++||+|++|++++++.+.+.++||++|.||.+.++..++++|++ .+|+++++
T Consensus 2 ~~~i~~~r~A~~I~~~~~~~~~~~i~~G~se~el~~~~e~~~~~~g~~-~aFp~~vs----------------------- 57 (295)
T TIGR00501 2 IERAEKWIEAGKIHSKVRREAADRIVPGVKLLEVAEFVENRIRELGAE-PAFPCNIS----------------------- 57 (295)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCcCCCCHHHHHHHHHHHHHHcCCC-CCCCccee-----------------------
Confidence 378999999999999999999999999999999999999999999876 45544332
Q ss_pred ecccccCCCCCCHHHHHhhhHHHHHhhcccccCCCceeccCCCccccccccC---CccccCCCEEEEecceeeCcEEece
Q psy247 172 LMDAGFSKPGRTEHELFTKFDYEVRMRGAQILAYPPVVASGDNANVIHYVHN---NQKCCHGDLLLMDAGCELNGYDSDI 248 (413)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g~~~~~~h~~~~---~~~i~~Gd~v~iD~g~~~~GY~aDi 248 (413)
.|...+||.|+ ++.|++||+|.+|+|+.++||++|+
T Consensus 58 -----------------------------------------~n~~~~H~~p~~~d~~~l~~GDvV~iD~G~~~dGY~aD~ 96 (295)
T TIGR00501 58 -----------------------------------------INECAAHFTPKAGDKTVFKDGDVVKLDLGAHVDGYIADT 96 (295)
T ss_pred -----------------------------------------cCCEeeCCCCCCCcCccCCCCCEEEEEEeEEECCEEEEE
Confidence 24455688775 5789999999999999999999999
Q ss_pred EEEEeecCCCCHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHH--HHHHcCcccccccccccCC-CCccCCCCCCCC
Q psy247 249 TRTWPISGQFTDHQKVLYEIVLDTQLKLLKLCEKSDSALNFIYRYA--YVFQIGFKFCPHHSSHYLG-MDVHDCAAIPRT 325 (413)
Q Consensus 249 tRT~~v~G~~~~~~~~~~~~~~~a~~~~~~~lkp~G~~~~ei~~~~--~~~~~g~~~~~h~~GHgiG-l~~~E~p~~~~~ 325 (413)
+||+++ |+ .++++|+++.+|++++++++|| |++++||++++ .+.+.|+....|.+||++| +.+|+.+.+++.
T Consensus 97 arT~~v-G~---~~~~l~~a~~~A~~aai~~~kP-Gv~~~dV~~ai~~vi~~~G~~~i~~~~GHgig~~~~h~g~~ip~i 171 (295)
T TIGR00501 97 AITVDL-GD---QYDNLVKAAKDALYTAIKEIRA-GVRVGEIGKAIQEVIESYGVKPISNLTGHSMAPYRLHGGKSIPNV 171 (295)
T ss_pred EEEEEe-Cc---HHHHHHHHHHHHHHHHHHHhcC-CCCHHHHHHHHHHHHHHcCCeeecCCCCcceecccccCCCccCee
Confidence 999999 64 3789999999999999999999 99999999999 7778888656799999999 578887665421
Q ss_pred CCCCCCcceecCCCCccccCCCCCCCCCCCCCcEEEeCCee
Q psy247 326 IPVAPGVVFTVEPGMDVHDCAAIPRTIPVAPGMVFTVEPGV 366 (413)
Q Consensus 326 ~~~~~g~~~~~~pg~~~~~~~~~~~~~~L~~GMv~~iEPgi 366 (413)
. .+...+|++||||+|||.+
T Consensus 172 -----------~----------~~~~~~le~GmV~aIEP~~ 191 (295)
T TIGR00501 172 -----------K----------ERDTTKLEEGDVVAIEPFA 191 (295)
T ss_pred -----------c----------CCCCCEeCCCCEEEEceeE
Confidence 1 2346789999999999965
No 31
>PTZ00053 methionine aminopeptidase 2; Provisional
Probab=99.98 E-value=7.6e-31 Score=265.94 Aligned_cols=194 Identities=18% Similarity=0.135 Sum_probs=163.2
Q ss_pred ccCCHHHHHHHHHHHHHHHHHHHHHHhccCCCCCHHHHHHHHHHHHHHcCCCCCCCCceeecCCCccccccccCCccccc
Q psy247 88 LYKSDSEQEMMRETCRIASEGFKETIGFSKPGRTEHELFTKFDYEVRMRGAQILAYPPVVASGDNANVIHYVHNNQKCCH 167 (413)
Q Consensus 88 ~vKs~~Ei~~~r~A~~i~~~~~~~~~~~~~~G~tE~el~~~~~~~~~~~G~~~~~~~~iv~sG~~~~~~~~~~~~~~~~~ 167 (413)
..+|++||+.||+|++|+++++..+.+.++||||+.||++.++..+++.....
T Consensus 151 ~~~s~~EI~~~R~AaeIa~~vl~~~~~~IkpG~se~EIa~~ie~~ir~~~~~~--------------------------- 203 (470)
T PTZ00053 151 EKLSEEQYQDLRRAAEVHRQVRRYAQSVIKPGVKLIDICERIESKSRELIEAD--------------------------- 203 (470)
T ss_pred ccCCHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHhc---------------------------
Confidence 44799999999999999999999999999999999999999998877652110
Q ss_pred CcceecccccCCCCCCHHHHHhhhHHHHHhhcc-cccCCCceeccCCCccccccccC---CccccCCCEEEEecceeeCc
Q psy247 168 GDLLLMDAGFSKPGRTEHELFTKFDYEVRMRGA-QILAYPPVVASGDNANVIHYVHN---NQKCCHGDLLLMDAGCELNG 243 (413)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~~g~~~~~~h~~~~---~~~i~~Gd~v~iD~g~~~~G 243 (413)
|. .+.+||+. ++.|.+.+|+.|+ +++|+.||+|.||+|+.++|
T Consensus 204 -------------------------------G~~~g~aFPt~--vS~N~~aaH~tP~~gd~~vLk~GDvVkID~G~~vdG 250 (470)
T PTZ00053 204 -------------------------------GLKCGWAFPTG--CSLNHCAAHYTPNTGDKTVLTYDDVCKLDFGTHVNG 250 (470)
T ss_pred -------------------------------CCcccCCCCce--eecCccccCCCCCCCCCcEecCCCeEEEEEeEEECC
Confidence 00 12356663 3567888899996 68899999999999999999
Q ss_pred EEeceEEEEeecCCCCHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHH--HHHHcCc----cc-----ccccccccC
Q psy247 244 YDSDITRTWPISGQFTDHQKVLYEIVLDTQLKLLKLCEKSDSALNFIYRYA--YVFQIGF----KF-----CPHHSSHYL 312 (413)
Q Consensus 244 Y~aDitRT~~v~G~~~~~~~~~~~~~~~a~~~~~~~lkp~G~~~~ei~~~~--~~~~~g~----~~-----~~h~~GHgi 312 (413)
|++|++||+.+ | ++++++++++.+|+++++++++| |++++||.+++ .+.+.|+ .+ ..|.+||+|
T Consensus 251 YiaD~ArTv~v-g---~~~~~L~eAv~eA~~aaI~~~kp-Gv~~~dI~~AIqevies~G~e~~Gk~f~~k~I~nltGHgI 325 (470)
T PTZ00053 251 RIIDCAFTVAF-N---PKYDPLLQATKDATNTGIKEAGI-DVRLSDIGAAIQEVIESYEVEIKGKTYPIKSIRNLNGHSI 325 (470)
T ss_pred EEEeEEEEEEe-C---HHHHHHHHHHHHHHHHHHHHhcC-CCcHHHHHHHHHHHHHHcCCcccCcccccccccCCcccCC
Confidence 99999999998 4 78999999999999999999999 99999999999 7777885 22 479999999
Q ss_pred CC-CccCCCCCCCCCCCCCCcceecCCCCccccCCCCCCCCCCCCCcEEEeCCeee
Q psy247 313 GM-DVHDCAAIPRTIPVAPGVVFTVEPGMDVHDCAAIPRTIPVAPGMVFTVEPGVY 367 (413)
Q Consensus 313 Gl-~~~E~p~~~~~~~~~~g~~~~~~pg~~~~~~~~~~~~~~L~~GMv~~iEPgi~ 367 (413)
|+ .+|+.|.++... .+...+|++||||+|||.+.
T Consensus 326 G~y~iHe~k~iP~v~---------------------~~~~~~LeeGmVfaIEPf~s 360 (470)
T PTZ00053 326 GPYIIHGGKSVPIVK---------------------GGENTRMEEGELFAIETFAS 360 (470)
T ss_pred CCccccCCCcCCeeC---------------------CCCCCEecCCCEEEEcceee
Confidence 97 899977665321 23567999999999999875
No 32
>TIGR00495 crvDNA_42K 42K curved DNA binding protein. Proteins identified by this model have been identified in a number of species as a nuclear (but not nucleolar) protein with a cell cycle dependence. Various names given to members of this family have included cell cycle protein p38-2G4, DNA-binding protein GBP16, and proliferation-associated protein 1. This protein is closely related to methionine aminopeptidase, a cobolt-binding protein.
Probab=99.98 E-value=1.1e-30 Score=262.62 Aligned_cols=211 Identities=17% Similarity=0.169 Sum_probs=173.6
Q ss_pred HccCCHHHHHHHHHHHHHHHHHHHHHHhccCCCCCHHHHHHHHHHHHHHcCCCCCCCCceeecCCCccccccccCCcccc
Q psy247 87 RLYKSDSEQEMMRETCRIASEGFKETIGFSKPGRTEHELFTKFDYEVRMRGAQILAYPPVVASGDNANVIHYVHNNQKCC 166 (413)
Q Consensus 87 R~vKs~~Ei~~~r~A~~i~~~~~~~~~~~~~~G~tE~el~~~~~~~~~~~G~~~~~~~~iv~sG~~~~~~~~~~~~~~~~ 166 (413)
-.+|+++||++||+|++|+++++..+.+.++||+|+.||.+..+..++++++. .|..
T Consensus 11 ~~i~~~~eI~~~r~Aa~Ia~~~l~~~~~~ikpG~t~~el~~~~~~~i~~~~a~--~~~~--------------------- 67 (389)
T TIGR00495 11 YSLSNPEVVTKYKMAGEIANNVLKSVVEACSPGAKVVDICEKGDAFIMEETAK--IFKK--------------------- 67 (389)
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHhhhh--hhcc---------------------
Confidence 36899999999999999999999999999999999999999999999887754 2210
Q ss_pred cCcceecccccCCCCCCHHHHHhhhHHHHHhhcccccCCCceeccCCCccccccccC----CccccCCCEEEEecceeeC
Q psy247 167 HGDLLLMDAGFSKPGRTEHELFTKFDYEVRMRGAQILAYPPVVASGDNANVIHYVHN----NQKCCHGDLLLMDAGCELN 242 (413)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g~~~~~~h~~~~----~~~i~~Gd~v~iD~g~~~~ 242 (413)
+..+..+.+||+.++ .|.+++|+.|. ++.|++||+|.||+|+.++
T Consensus 68 -----------------------------~~~~~~g~afpt~vS--vN~~v~H~~P~~~d~~~~Lk~GDvVkIDlG~~id 116 (389)
T TIGR00495 68 -----------------------------EKEMEKGIAFPTCIS--VNNCVGHFSPLKSDQDYILKEGDVVKIDLGCHID 116 (389)
T ss_pred -----------------------------cccccCCCCCCeEEe--cCCeeeCCCCCCCCCCcCcCCCCEEEEEEEEEEC
Confidence 001122346666554 78899999983 4889999999999999999
Q ss_pred cEEeceEEEEeecCC-----CCHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHH--HHHHcCcccccccccccCCCC
Q psy247 243 GYDSDITRTWPISGQ-----FTDHQKVLYEIVLDTQLKLLKLCEKSDSALNFIYRYA--YVFQIGFKFCPHHSSHYLGMD 315 (413)
Q Consensus 243 GY~aDitRT~~v~G~-----~~~~~~~~~~~~~~a~~~~~~~lkp~G~~~~ei~~~~--~~~~~g~~~~~h~~GHgiGl~ 315 (413)
||++|++||+++ |+ ++++++++++++.+|++++++++|| |++++||.+++ .+.+.|+....+.+||+||..
T Consensus 117 GY~aD~arTv~v-G~~~~~~~t~~~~~l~~aa~~A~~aai~~vkP-G~~~~dI~~ai~~v~~~~G~~~v~~~~gH~igr~ 194 (389)
T TIGR00495 117 GFIALVAHTFVV-GVAQEEPVTGRKADVIAAAHLAAEAALRLVKP-GNTNTQVTEAINKVAHSYGCTPVEGMLSHQLKQH 194 (389)
T ss_pred CEEEEEEEEEEE-CCcccccCCHHHHHHHHHHHHHHHHHHHHhCC-CCcHHHHHHHHHHHHHHcCCeecCCceeecccce
Confidence 999999999999 64 6789999999999999999999999 99999999999 778899987889999999999
Q ss_pred ccC-CCCC-CCCCCCCCCcceecCCCCccccCCCCCCCCCCCCCcEEEeCCeeeEc
Q psy247 316 VHD-CAAI-PRTIPVAPGVVFTVEPGMDVHDCAAIPRTIPVAPGMVFTVEPGVYIS 369 (413)
Q Consensus 316 ~~E-~p~~-~~~~~~~~g~~~~~~pg~~~~~~~~~~~~~~L~~GMv~~iEPgi~~~ 369 (413)
+|| .|.+ +++.. ... .......|++||||+|||.+...
T Consensus 195 ~~~g~~~Ii~~~~~-------------~~~---~~~~~~~le~gev~aIEp~vs~G 234 (389)
T TIGR00495 195 VIDGEKVIISNPSD-------------SQK---KDHDTAEFEENEVYAVDILVSTG 234 (389)
T ss_pred eccCCCeeeecCCc-------------ccc---CCCCCCEecCCCEEEEeeeecCC
Confidence 998 6764 32210 000 01246789999999999988644
No 33
>cd01088 MetAP2 Methionine Aminopeptidase 2. E.C. 3.4.11.18. Also known as methionyl aminopeptidase and peptidase M. Catalyzes release of N-terminal amino acids, preferentially methionine, from peptides and arylamides.
Probab=99.97 E-value=1.4e-30 Score=253.66 Aligned_cols=182 Identities=24% Similarity=0.251 Sum_probs=156.5
Q ss_pred HHHHHHHHHHHHHHHHHHHhccCCCCCHHHHHHHHHHHHHHcCCCCCCCCceeecCCCccccccccCCcccccCcceecc
Q psy247 95 QEMMRETCRIASEGFKETIGFSKPGRTEHELFTKFDYEVRMRGAQILAYPPVVASGDNANVIHYVHNNQKCCHGDLLLMD 174 (413)
Q Consensus 95 i~~~r~A~~i~~~~~~~~~~~~~~G~tE~el~~~~~~~~~~~G~~~~~~~~iv~sG~~~~~~~~~~~~~~~~~~~~~~~~ 174 (413)
+++||+|++|+++++.++++.++||+||.||++.+++.++++|+. .+|++
T Consensus 1 ~~~~r~Aa~I~~~a~~~~~~~i~pG~te~ei~~~~~~~i~~~G~~-~afp~----------------------------- 50 (291)
T cd01088 1 LEKYREAGEIHRQVRKYAQSLIKPGMTLLEIAEFVENRIRELGAG-PAFPV----------------------------- 50 (291)
T ss_pred CHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCC-CCCCc-----------------------------
Confidence 368999999999999999999999999999999999999999863 34432
Q ss_pred cccCCCCCCHHHHHhhhHHHHHhhcccccCCCceeccCCCccccccccCC---ccccCCCEEEEecceeeCcEEeceEEE
Q psy247 175 AGFSKPGRTEHELFTKFDYEVRMRGAQILAYPPVVASGDNANVIHYVHNN---QKCCHGDLLLMDAGCELNGYDSDITRT 251 (413)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g~~~~~~h~~~~~---~~i~~Gd~v~iD~g~~~~GY~aDitRT 251 (413)
. ++.|...+||.|+. +++++||+|.+|+|+.++||++|++||
T Consensus 51 ---------------------------------~--is~n~~~~H~~p~~~d~~~l~~GDvV~iD~G~~~dGY~sD~arT 95 (291)
T cd01088 51 ---------------------------------N--LSINECAAHYTPNAGDDTVLKEGDVVKLDFGAHVDGYIADSAFT 95 (291)
T ss_pred ---------------------------------e--eccCCEeeCCCCCCCCCcccCCCCEEEEEEEEEECCEEEEEEEE
Confidence 2 34455677888864 889999999999999999999999999
Q ss_pred EeecCCCCHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHH--HHHHcCcccccccccccCC-CCccCCCCCCCCCCC
Q psy247 252 WPISGQFTDHQKVLYEIVLDTQLKLLKLCEKSDSALNFIYRYA--YVFQIGFKFCPHHSSHYLG-MDVHDCAAIPRTIPV 328 (413)
Q Consensus 252 ~~v~G~~~~~~~~~~~~~~~a~~~~~~~lkp~G~~~~ei~~~~--~~~~~g~~~~~h~~GHgiG-l~~~E~p~~~~~~~~ 328 (413)
+++ |+ +++++++++++|++++++++|| |++++||++++ .+.+.|+....|.+||+|| +.+|+.|.+++..
T Consensus 96 ~~v-g~---~~~~l~ea~~~A~~~ai~~ikP-G~~~~dV~~ai~~~i~~~G~~~~~~~~GHgig~~~~h~~~~ip~~~-- 168 (291)
T cd01088 96 VDF-DP---KYDDLLEAAKEALNAAIKEAGP-DVRLGEIGEAIEEVIESYGFKPIRNLTGHSIERYRLHAGKSIPNVK-- 168 (291)
T ss_pred Eec-Ch---hHHHHHHHHHHHHHHHHHHhcC-CCcHHHHHHHHHHHHHHcCCEEeecCCccCccCccccCCCccCccC--
Confidence 999 53 7889999999999999999999 99999999999 7788898656899999999 5899988765321
Q ss_pred CCCcceecCCCCccccCCCCCCCCCCCCCcEEEeCCeee
Q psy247 329 APGVVFTVEPGMDVHDCAAIPRTIPVAPGMVFTVEPGVY 367 (413)
Q Consensus 329 ~~g~~~~~~pg~~~~~~~~~~~~~~L~~GMv~~iEPgi~ 367 (413)
.+.+.+|+|||||+|||.+.
T Consensus 169 -------------------~~~~~~le~gmV~aIEp~~s 188 (291)
T cd01088 169 -------------------GGEGTRLEEGDVYAIEPFAT 188 (291)
T ss_pred -------------------CCCCCEeCCCCEEEEceeEE
Confidence 23478999999999999653
No 34
>KOG1189|consensus
Probab=99.95 E-value=6.9e-27 Score=239.42 Aligned_cols=252 Identities=18% Similarity=0.265 Sum_probs=193.3
Q ss_pred CCcccchHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHhc-----cCC--CCCHHHHHHHHHHHHHHcCCCCCCCCc
Q psy247 73 DYSWNVPKQLFHQLRLYKSDSEQEMMRETCRIASEGFKETIGF-----SKP--GRTEHELFTKFDYEVRMRGAQILAYPP 145 (413)
Q Consensus 73 ~~~~~d~~~~l~~~R~vKs~~Ei~~~r~A~~i~~~~~~~~~~~-----~~~--G~tE~el~~~~~~~~~~~G~~~~~~~~ 145 (413)
++..+|++..+..+.++|++.||+.+|+|++++...|.+.+.. +.. -+|...|...++..+...-..
T Consensus 121 ~fn~vDis~~ls~l~avKDd~Ei~~irksa~~s~~vm~k~~~~~~~~aiD~ekkvthskLsD~~e~~I~~~k~s------ 194 (960)
T KOG1189|consen 121 GFNKVDISLGLSKLFAVKDDEEIANIRKSAAASSAVMNKYLVDELVEAIDEEKKVTHSKLSDLMESAIEDKKYS------ 194 (960)
T ss_pred CCceeehhhhhhhheeeccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhhhHHHHHHHHHHhhccccC------
Confidence 4677899999999999999999999999999999999954432 333 346666666666655442111
Q ss_pred eeecCCCccccccccCCcccccCcceecccccCCCCCCHHHHHhhhHHHHHhhcccccCCCceeccCCCccc-cccccCC
Q psy247 146 VVASGDNANVIHYVHNNQKCCHGDLLLMDAGFSKPGRTEHELFTKFDYEVRMRGAQILAYPPVVASGDNANV-IHYVHNN 224 (413)
Q Consensus 146 iv~sG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g~~~~~-~h~~~~~ 224 (413)
.|... ..-...||||+.+|.+... +....++
T Consensus 195 ---~~l~~---------------------------------------------~~~d~cY~PIiqSGg~ydlk~sa~s~~ 226 (960)
T KOG1189|consen 195 ---PGLDP---------------------------------------------DLLDMCYPPIIQSGGKYDLKPSAVSDD 226 (960)
T ss_pred ---cccCc---------------------------------------------cccccccChhhhcCCcccccccccccc
Confidence 00000 0012357777777776654 3444556
Q ss_pred ccccCCCEEEEecceeeCcEEeceEEEEeecCCCCHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHH--HHHHcCc-
Q psy247 225 QKCCHGDLLLMDAGCELNGYDSDITRTWPISGQFTDHQKVLYEIVLDTQLKLLKLCEKSDSALNFIYRYA--YVFQIGF- 301 (413)
Q Consensus 225 ~~i~~Gd~v~iD~g~~~~GY~aDitRT~~v~G~~~~~~~~~~~~~~~a~~~~~~~lkp~G~~~~ei~~~~--~~~~~g~- 301 (413)
..+ + .|+..+|++|++||++++||+.| .|+.+|+++|+.++.+|++++.+||| |+..++||.++ ++.+.+-
T Consensus 227 ~~L--~-~I~cs~G~RynsYCSNv~RT~Li--dpssemq~nY~fLl~aqe~il~~lrp-G~ki~dVY~~~l~~v~k~~Pe 300 (960)
T KOG1189|consen 227 NHL--H-VILCSLGIRYNSYCSNVSRTYLI--DPSSEMQENYEFLLAAQEEILKLLRP-GTKIGDVYEKALDYVEKNKPE 300 (960)
T ss_pred ccc--c-eEEeeccchhhhhhccccceeee--cchHHHHHHHHHHHHHHHHHHHhhcC-CCchhHHHHHHHHHHHhcCcc
Confidence 666 4 99999999999999999999999 89999999999999999999999999 99999999998 6666554
Q ss_pred --ccccccccccCCCCccCCCCCCCCCCCCCCcceecCCCCccccCCCCCCCCCCCCCcEEEeCCeeeEcCCCCCccccc
Q psy247 302 --KFCPHHSSHYLGMDVHDCAAIPRTIPVAPGVVFTVEPGMDVHDCAAIPRTIPVAPGMVFTVEPGVYISKDCKETRPEF 379 (413)
Q Consensus 302 --~~~~h~~GHgiGl~~~E~p~~~~~~~~~~g~~~~~~pg~~~~~~~~~~~~~~L~~GMv~~iEPgi~~~~~~~~~~~~~ 379 (413)
..+...+|.+||++.+|...+.+ ..++.+|++||||.|.-|+-.-.. +..-
T Consensus 301 l~~~~~k~lG~~iGlEFREssl~in-----------------------aKnd~~lk~gmvFni~lGf~nl~n----~~~~ 353 (960)
T KOG1189|consen 301 LVPNFTKNLGFGIGLEFRESSLVIN-----------------------AKNDRVLKKGMVFNISLGFSNLTN----PESK 353 (960)
T ss_pred hhhhhhhhcccccceeeeccccccc-----------------------ccchhhhccCcEEEEeeccccccC----cccc
Confidence 34677899999999999887542 457899999999999877654332 2222
Q ss_pred ccceEEEceeEEEeCCCCcccCCCCCCCCcccc
Q psy247 380 RGMGIRIEDDILIDKSSNVENLSAMCPKNIDEI 412 (413)
Q Consensus 380 ~~~gvriED~vlVt~~G~~e~Lt~~~p~~~~~i 412 (413)
+.+.+-+.|||+|+++++.+.||. +++...+|
T Consensus 354 ~~yaL~l~DTvlv~e~~p~~vLT~-~~K~~~dv 385 (960)
T KOG1189|consen 354 NSYALLLSDTVLVGEDPPAEVLTD-SAKAVKDV 385 (960)
T ss_pred cchhhhccceeeecCCCcchhhcc-cchhhccc
Confidence 337889999999999998799998 67766543
No 35
>KOG2413|consensus
Probab=99.95 E-value=1.7e-26 Score=233.88 Aligned_cols=226 Identities=24% Similarity=0.377 Sum_probs=179.4
Q ss_pred chHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHhcc----CCC--CCHHHHHHHHHHHHHHc-CCCCCCCCceeecC
Q psy247 78 VPKQLFHQLRLYKSDSEQEMMRETCRIASEGFKETIGFS----KPG--RTEHELFTKFDYEVRMR-GAQILAYPPVVASG 150 (413)
Q Consensus 78 d~~~~l~~~R~vKs~~Ei~~~r~A~~i~~~~~~~~~~~~----~~G--~tE~el~~~~~~~~~~~-G~~~~~~~~iv~sG 150 (413)
.....+..++++|++.|++.||.+----..|+...+.++ ..| +||.+++.++++.=+++ +..+++|
T Consensus 296 ~~~Spi~~~kAiKN~~E~~gmr~shirD~~Alve~~~wle~~~~~g~~itE~~~A~kle~fR~~~~~fmglSF------- 368 (606)
T KOG2413|consen 296 IDPSPISRAKAIKNDDELKGMRNSHIRDGAALVEYFAWLEKELHKGYTITEYDAADKLEEFRSRQDHFMGLSF------- 368 (606)
T ss_pred cccCHHHHHHHhcChHHhhhhhhcchhhHHHHHHHHHHHhhhhhcCcccchhhHHHHHHHHHHhhccccCcCc-------
Confidence 345577889999999999999988776667776666664 466 89999999988654333 2234444
Q ss_pred CCccccccccCCcccccCcceecccccCCCCCCHHHHHhhhHHHHHhhcccccCCCceecc-CCCccccccccC---Ccc
Q psy247 151 DNANVIHYVHNNQKCCHGDLLLMDAGFSKPGRTEHELFTKFDYEVRMRGAQILAYPPVVAS-GDNANVIHYVHN---NQK 226 (413)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~-g~~~~~~h~~~~---~~~ 226 (413)
++|+++ |+|++++||.|. ++.
T Consensus 369 -------------------------------------------------------eTIS~s~G~NgAviHYsP~~e~n~~ 393 (606)
T KOG2413|consen 369 -------------------------------------------------------ETISSSVGPNGAVIHYSPPAETNRI 393 (606)
T ss_pred -------------------------------------------------------ceeeccCCCCceeeecCCCccccce
Confidence 445533 555666666653 568
Q ss_pred ccCCCEEEEecceeeCcEEeceEEEEeecCCCCHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHH--HHHHcCcccc
Q psy247 227 CCHGDLLLMDAGCELNGYDSDITRTWPISGQFTDHQKVLYEIVLDTQLKLLKLCEKSDSALNFIYRYA--YVFQIGFKFC 304 (413)
Q Consensus 227 i~~Gd~v~iD~g~~~~GY~aDitRT~~v~G~~~~~~~~~~~~~~~a~~~~~~~lkp~G~~~~ei~~~~--~~~~~g~~~~ 304 (413)
+.+..+.++|.|++|.--++|+|||+.+ |+||+++++.|..|+..+.+..++.-|.|.....+...+ .+++.|.+|
T Consensus 394 i~~~kiyL~DSGaQY~DGTTDvTRT~Hf-gePs~eek~~yT~VLkGhi~la~~vFP~~t~g~~lD~laR~~LW~~gLDy- 471 (606)
T KOG2413|consen 394 VSPDKIYLCDSGAQYLDGTTDVTRTVHF-GEPTAEEKEAYTLVLKGHIALARAVFPKGTKGSVLDALARSALWKAGLDY- 471 (606)
T ss_pred ecCceEEEEccCcccccCccceeEEEec-CCCCHHHHHHHHHHHHhhhHhhhcccCCCCCcchhHHHHHHHHHhhcccc-
Confidence 9999999999999999999999999999 999999999999999999999999888666655555444 788888765
Q ss_pred cccccccCC--CCccCCCCCCCCCCCCCCcceecCCCCccccCCCCCCCCCCCCCcEEEeCCeeeEcCCCCCcccccccc
Q psy247 305 PHHSSHYLG--MDVHDCAAIPRTIPVAPGVVFTVEPGMDVHDCAAIPRTIPVAPGMVFTVEPGVYISKDCKETRPEFRGM 382 (413)
Q Consensus 305 ~h~~GHgiG--l~~~E~p~~~~~~~~~~g~~~~~~pg~~~~~~~~~~~~~~L~~GMv~~iEPgi~~~~~~~~~~~~~~~~ 382 (413)
.|++|||+| +.+||+|......+ .++...|+.||++++|||.|-.+. |
T Consensus 472 ~HgTGHGVG~fLnVhE~P~~is~r~--------------------~~~~~~l~ag~~~s~EPGYY~dg~----------f 521 (606)
T KOG2413|consen 472 GHGTGHGVGSFLNVHEGPIGIGYRP--------------------YSSNFPLQAGMVFSIEPGYYKDGE----------F 521 (606)
T ss_pred CCCCCcccccceEeccCCceeeeee--------------------cCCCchhcCceEeccCCcccccCc----------c
Confidence 799999999 89999996432111 356788999999999999998876 8
Q ss_pred eEEEceeEEEeCCCC
Q psy247 383 GIRIEDDILIDKSSN 397 (413)
Q Consensus 383 gvriED~vlVt~~G~ 397 (413)
|+|||++++|.+.+.
T Consensus 522 GIRienv~~vvd~~~ 536 (606)
T KOG2413|consen 522 GIRIENVVEVVDAGT 536 (606)
T ss_pred eEEEeeEEEEEeccc
Confidence 999999999987764
No 36
>COG5406 Nucleosome binding factor SPN, SPT16 subunit [Transcription / DNA replication, recombination, and repair / Chromatin structure and dynamics]
Probab=99.82 E-value=5.3e-19 Score=178.62 Aligned_cols=257 Identities=18% Similarity=0.175 Sum_probs=178.6
Q ss_pred CcccchHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHhccC----C--CCCHHHHHHHHHHHHHHc-CCCCCCCCce
Q psy247 74 YSWNVPKQLFHQLRLYKSDSEQEMMRETCRIASEGFKETIGFSK----P--GRTEHELFTKFDYEVRMR-GAQILAYPPV 146 (413)
Q Consensus 74 ~~~~d~~~~l~~~R~vKs~~Ei~~~r~A~~i~~~~~~~~~~~~~----~--G~tE~el~~~~~~~~~~~-G~~~~~~~~i 146 (413)
+..+|++.-+..+-.+|+.+||+.+|.+++.++..|....+.+. . -+|...+...++..+-.. +.+..+
T Consensus 155 fN~~DvslgLsk~~~~KD~~E~an~~~ss~~s~~~M~~~~~em~~~~D~~~kit~~KlsD~mes~iddv~f~q~~s---- 230 (1001)
T COG5406 155 FNASDVSLGLSKMFLTKDAEEIANCRASSAASSVLMRYFVKEMEMLWDGAFKITHGKLSDLMESLIDDVEFFQTKS---- 230 (1001)
T ss_pred cchhhhhhhhhHHhccccHHHHhhccccchHHHHHHHHHHHHHHHHHhhhhhhccchHHHHhhhhcchhhhhhhcC----
Confidence 34578999999999999999999999999999999986555321 1 122233333332211110 000000
Q ss_pred eecCCCccccccccCCcccccCcceecccccCCCCCCHHHHHhhhHHHHHhhcccccCCCceeccCCCccc-cccccCCc
Q psy247 147 VASGDNANVIHYVHNNQKCCHGDLLLMDAGFSKPGRTEHELFTKFDYEVRMRGAQILAYPPVVASGDNANV-IHYVHNNQ 225 (413)
Q Consensus 147 v~sG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g~~~~~-~h~~~~~~ 225 (413)
+..||+ ++ ..-.+.|.||+++|..-.. +.....++
T Consensus 231 ------------------~~l~~~---------------~~-----------d~lew~ytpiiqsg~~~Dl~psa~s~~~ 266 (1001)
T COG5406 231 ------------------LKLGDI---------------DL-----------DQLEWCYTPIIQSGGSIDLTPSAFSFPM 266 (1001)
T ss_pred ------------------cccccc---------------ch-----------hhhhhhcchhhccCceeecccccccCch
Confidence 000000 00 0112346667666664432 22223334
Q ss_pred cccCCCEEEEecceeeCcEEeceEEEEeecCCCCHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHH--HHHHcCc--
Q psy247 226 KCCHGDLLLMDAGCELNGYDSDITRTWPISGQFTDHQKVLYEIVLDTQLKLLKLCEKSDSALNFIYRYA--YVFQIGF-- 301 (413)
Q Consensus 226 ~i~~Gd~v~iD~g~~~~GY~aDitRT~~v~G~~~~~~~~~~~~~~~a~~~~~~~lkp~G~~~~ei~~~~--~~~~~g~-- 301 (413)
.+ .||.|++.+|.+|+|||++++||+.+ +|+.+|++.|+.++.+|+..+..+|| |...++||..+ ++.+.|-
T Consensus 267 ~l-~gd~vl~s~GiRYn~YCSn~~RT~l~--dp~~e~~~Ny~fl~~lQk~i~~~~rp-G~~~g~iY~~~~~yi~~~~pel 342 (1001)
T COG5406 267 EL-TGDVVLLSIGIRYNGYCSNMSRTILT--DPDSEQQKNYEFLYMLQKYILGLVRP-GTDSGIIYSEAEKYISSNGPEL 342 (1001)
T ss_pred hh-cCceEEEEeeeeeccccccccceEEe--CCchHhhhhHHHHHHHHHHHHhhcCC-CCCchhHHHHHHHHHHhcCCcc
Confidence 43 47899999999999999999999988 89999999999999999999999999 99999999998 6666665
Q ss_pred -ccccccccccCCCCccCCCCCCCCCCCCCCcceecCCCCccccCCCCCCCCCCCCCcEEEeCCeeeEcCCCCCcccccc
Q psy247 302 -KFCPHHSSHYLGMDVHDCAAIPRTIPVAPGVVFTVEPGMDVHDCAAIPRTIPVAPGMVFTVEPGVYISKDCKETRPEFR 380 (413)
Q Consensus 302 -~~~~h~~GHgiGl~~~E~p~~~~~~~~~~g~~~~~~pg~~~~~~~~~~~~~~L~~GMv~~iEPgi~~~~~~~~~~~~~~ 380 (413)
..|...+|-+||++.++...+.+ ..+.++||.||+|.|.-|+-.--+ +.--.
T Consensus 343 ~pnF~~nvG~~igiefR~s~~~~n-----------------------vkn~r~lq~g~~fnis~gf~nl~~----~~~~N 395 (1001)
T COG5406 343 GPNFIYNVGLMIGIEFRSSQKPFN-----------------------VKNGRVLQAGCIFNISLGFGNLIN----PHPKN 395 (1001)
T ss_pred CchHhhhhhhhcccccccccccee-----------------------ccCCceeccccEEEEeecccccCC----CCccc
Confidence 34567899999999888765322 346799999999999876543211 11112
Q ss_pred cceEEEceeEEEeCCCCcccCCCCCCCCccc
Q psy247 381 GMGIRIEDDILIDKSSNVENLSAMCPKNIDE 411 (413)
Q Consensus 381 ~~gvriED~vlVt~~G~~e~Lt~~~p~~~~~ 411 (413)
.+.+.+-||+-|+-+.+ .++|. .|+.--+
T Consensus 396 nyal~l~dt~qi~ls~p-~~~t~-~~kaq~~ 424 (1001)
T COG5406 396 NYALLLIDTEQISLSNP-IVFTD-SPKAQGD 424 (1001)
T ss_pred chhhhhccceEeecCCc-eeccc-Ccccccc
Confidence 37888999999999999 99998 6875443
No 37
>PF05195 AMP_N: Aminopeptidase P, N-terminal domain; InterPro: IPR007865 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This N-terminal domain is associated with N-terminal region of aminopeptidase P (X-Pro aminopeptidase I and II, 3.4.11.9 from EC) and related sequences. It is not found associated with methionyl aminopeptidase 1 (IPR002467 from INTERPRO) or methionyl aminopeptidase 2 (IPR002468 from INTERPRO) families. The domain is structurally very similar [] to the creatinase N-terminal domain (IPR000587 from INTERPRO), however, little or no sequence similarity exists between the two domains. The sequences belong to MEROPS peptidase family M24B, clan MG.; GO: 0004177 aminopeptidase activity, 0030145 manganese ion binding; PDB: 3IG4_B 2OKN_A 2IW2_B 1WBQ_A 2BH3_A 1WLR_A 2V3Z_A 1W2M_B 2BWT_A 2BWW_A ....
Probab=99.42 E-value=5.6e-14 Score=121.49 Aligned_cols=83 Identities=37% Similarity=0.686 Sum_probs=49.8
Q ss_pred CCCCcceeeeecCceEEecCCCCCCEEEEE-EcCCCCCceEEEEEeCcchhhhccCCCcccHhhHhhhcCCCCCCcccch
Q psy247 1 MTEKIPYIFRQNTDFFYFTGCLEPDSAVVI-HGASDENFKSELFVKRKDAKAELWDGPRTGKAQLNGYVPRRKDYSWNVP 79 (413)
Q Consensus 1 ~~~~~~~~f~q~~n~~YltG~~~~~~~lv~-~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~ 79 (413)
+++|++|+|||++||+||||+.+|++++++ +.++ .+.+||++++++..++|.|++.+.+++.+....-.-..+.+.
T Consensus 33 ~~~D~~y~FrQ~s~F~YLTG~~ep~~~lvl~~~~~---~~~~LF~~~~d~~~e~W~G~~~~~e~a~~~~gvd~v~~~~~l 109 (134)
T PF05195_consen 33 RSNDIEYPFRQDSNFYYLTGFNEPDAVLVLKDGES---GKSTLFVPPKDPDDEIWDGPRPGPEEAKEIYGVDEVYYIDEL 109 (134)
T ss_dssp EETTEEE-----HHHHHHH---STT-EEEEEECTT---EEEEEEE----CCGHHCCSS--HHHHHHHHHT-SEEEEGGGH
T ss_pred ecCCCccccccCCcEEEEeCCCCCCEEEEEecCCC---CeEEEEeCCCCcCccEECccCCCHHHHHHHhCCCEEEEHHHH
Confidence 358999999999999999999999999999 5432 389999999999999999999999988877753221222344
Q ss_pred HHHHHHH
Q psy247 80 KQLFHQL 86 (413)
Q Consensus 80 ~~~l~~~ 86 (413)
...+..+
T Consensus 110 ~~~l~~~ 116 (134)
T PF05195_consen 110 EEVLSEL 116 (134)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 4444443
No 38
>KOG2775|consensus
Probab=99.16 E-value=3.8e-10 Score=106.47 Aligned_cols=190 Identities=17% Similarity=0.161 Sum_probs=140.4
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHhccCCCCCHHHHHHHHHHHHHHcCCCCCCCCceeecCCCccccccccCCcccccCc
Q psy247 90 KSDSEQEMMRETCRIASEGFKETIGFSKPGRTEHELFTKFDYEVRMRGAQILAYPPVVASGDNANVIHYVHNNQKCCHGD 169 (413)
Q Consensus 90 Ks~~Ei~~~r~A~~i~~~~~~~~~~~~~~G~tE~el~~~~~~~~~~~G~~~~~~~~iv~sG~~~~~~~~~~~~~~~~~~~ 169 (413)
-..+...-+|+|+++..++-.++...++||||-.||...++...|+.-.+. |-
T Consensus 80 ~~~~i~~d~rraAE~HRqvR~yv~s~ikPGmtm~ei~e~iEnttR~li~e~---------gl------------------ 132 (397)
T KOG2775|consen 80 TESDIYQDLRRAAEAHRQVRKYVQSIIKPGMTMIEICETIENTTRKLILEN---------GL------------------ 132 (397)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHhccCcccHHHHHHHHHHHHHHHHHhc---------cc------------------
Confidence 344556788999999999999999999999999999999987776432110 00
Q ss_pred ceecccccCCCCCCHHHHHhhhHHHHHhhcccccCCCceeccCCCccccccccC---CccccCCCEEEEecceeeCcEEe
Q psy247 170 LLLMDAGFSKPGRTEHELFTKFDYEVRMRGAQILAYPPVVASGDNANVIHYVHN---NQKCCHGDLLLMDAGCELNGYDS 246 (413)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g~~~~~~h~~~~---~~~i~~Gd~v~iD~g~~~~GY~a 246 (413)
..+.+||.- .+.|.|-.||+|| ..+|+..|++.||+|...+|-..
T Consensus 133 ------------------------------~aGi~FPtG--~SlN~cAAHyTpNaGd~tVLqydDV~KiDfGthi~GrIi 180 (397)
T KOG2775|consen 133 ------------------------------NAGIGFPTG--CSLNHCAAHYTPNAGDKTVLKYDDVMKIDFGTHIDGRII 180 (397)
T ss_pred ------------------------------cccccCCCc--ccccchhhhcCCCCCCceeeeecceEEEeccccccCeEe
Confidence 012234432 3456677799987 35689999999999999999999
Q ss_pred ceEEEEeecCCCCHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHH--HHHH-----cC--c--ccccccccccCC-C
Q psy247 247 DITRTWPISGQFTDHQKVLYEIVLDTQLKLLKLCEKSDSALNFIYRYA--YVFQ-----IG--F--KFCPHHSSHYLG-M 314 (413)
Q Consensus 247 DitRT~~v~G~~~~~~~~~~~~~~~a~~~~~~~lkp~G~~~~ei~~~~--~~~~-----~g--~--~~~~h~~GHgiG-l 314 (413)
|.+.|+.+ .+....+..++.+|...+++.+-. .+...||-+++ .+.. .| | +......||+|+ .
T Consensus 181 DsAFTv~F----~p~~d~Ll~AvreaT~tGIkeaGi-DvRlcdiG~aiqEVmeSyEvEi~Gk~~~VKpIrnLnGHSI~~y 255 (397)
T KOG2775|consen 181 DSAFTVAF----NPKYDPLLAAVREATNTGIKEAGI-DVRLCDIGEAIQEVMESYEVEINGKTYQVKPIRNLNGHSIAQY 255 (397)
T ss_pred eeeeEEee----CccccHHHHHHHHHHhhhhhhcCc-eeeehhhhHHHHHHhhheEEEeCCceecceeccccCCCcccce
Confidence 99999988 455667888999999999998888 88899998887 3322 12 1 234556799998 4
Q ss_pred CccCCCCCCCCCCCCCCcceecCCCCccccCCCCCCCCCCCCCcEEEeCC
Q psy247 315 DVHDCAAIPRTIPVAPGVVFTVEPGMDVHDCAAIPRTIPVAPGMVFTVEP 364 (413)
Q Consensus 315 ~~~E~p~~~~~~~~~~g~~~~~~pg~~~~~~~~~~~~~~L~~GMv~~iEP 364 (413)
.+|-.-.+|.. - .+....+++|..++||.
T Consensus 256 rIH~gksVPiV------------k---------gge~trmee~e~yAIET 284 (397)
T KOG2775|consen 256 RIHGGKSVPIV------------K---------GGEQTRMEEGEIYAIET 284 (397)
T ss_pred EeecCccccee------------c---------CCcceeecCCeeEEEEe
Confidence 45554444311 0 24678999999999994
No 39
>KOG2776|consensus
Probab=99.00 E-value=5.9e-09 Score=100.84 Aligned_cols=151 Identities=19% Similarity=0.249 Sum_probs=116.3
Q ss_pred ccCCHHHHHHHHHHHHHHHHHHHHHHhccCCCCCHHHHHHHHHHHHHHcCCCCCCCCceeecCCCccccccccCCccccc
Q psy247 88 LYKSDSEQEMMRETCRIASEGFKETIGFSKPGRTEHELFTKFDYEVRMRGAQILAYPPVVASGDNANVIHYVHNNQKCCH 167 (413)
Q Consensus 88 ~vKs~~Ei~~~r~A~~i~~~~~~~~~~~~~~G~tE~el~~~~~~~~~~~G~~~~~~~~iv~sG~~~~~~~~~~~~~~~~~ 167 (413)
.+-++.-+..+|-|++|+..++..+...+.+|.+-.||...-+..+.+.-.+. |. +
T Consensus 14 tia~~~vvtKYk~AgeI~n~~lk~V~~~~~~gasv~eiC~~GD~~i~E~t~ki--YK----------------~------ 69 (398)
T KOG2776|consen 14 TIANDSVVTKYKMAGEIVNKVLKSVVELCQPGASVREICEKGDSLILEETGKI--YK----------------K------ 69 (398)
T ss_pred ccccHHHHhhhhhHHHHHHHHHHHHHHHhcCCchHHHHHHhhhHHHHHHHHHH--Hh----------------h------
Confidence 34566677899999999999999999999999999999877776665542220 10 0
Q ss_pred CcceecccccCCCCCCHHHHHhhhHHHHHhhcccccCCCceeccCCCccccccccC----CccccCCCEEEEecceeeCc
Q psy247 168 GDLLLMDAGFSKPGRTEHELFTKFDYEVRMRGAQILAYPPVVASGDNANVIHYVHN----NQKCCHGDLLLMDAGCELNG 243 (413)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g~~~~~~h~~~~----~~~i~~Gd~v~iD~g~~~~G 243 (413)
| +.--.+.+||+.++ .|.++.|+.|- +..|++||+|.||+|+.++|
T Consensus 70 ----------------e------------K~~~KGIAfPT~Is--vnncv~h~sPlksd~~~~Lk~GDvVKIdLG~HiDG 119 (398)
T KOG2776|consen 70 ----------------E------------KDFEKGIAFPTSIS--VNNCVCHFSPLKSDADYTLKEGDVVKIDLGVHIDG 119 (398)
T ss_pred ----------------h------------hhhhccccccceec--ccceeeccCcCCCCCcccccCCCEEEEEeeeeecc
Confidence 0 00012345665543 46677788763 56799999999999999999
Q ss_pred EEeceEEEEeecCC-----CCHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHH
Q psy247 244 YDSDITRTWPISGQ-----FTDHQKVLYEIVLDTQLKLLKLCEKSDSALNFIYRYA 294 (413)
Q Consensus 244 Y~aDitRT~~v~G~-----~~~~~~~~~~~~~~a~~~~~~~lkp~G~~~~ei~~~~ 294 (413)
|.+.++.|++| +. .+....++..++..|.++++.++|| |.+-..|-+++
T Consensus 120 fiA~vaHT~VV-~~~~~~~vtG~kADvI~AAh~A~eaa~rllkp-gn~n~~vT~~i 173 (398)
T KOG2776|consen 120 FIALVAHTIVV-GPAPDTPVTGRKADVIAAAHLAAEAALRLLKP-GNTNTQVTRAI 173 (398)
T ss_pred ceeeeeeeEEe-ccCCCCcccCchhHHHHHHHHHHHHHHHHhCC-CCCCchhhHHH
Confidence 99999999999 43 3456788888889999999999999 99988888777
No 40
>KOG2737|consensus
Probab=98.32 E-value=1.1e-07 Score=92.69 Aligned_cols=216 Identities=19% Similarity=0.217 Sum_probs=131.2
Q ss_pred CcccchHHHHHHHH---ccCCHHHHHHHHHHHH-HHHHHHHHHHhccCCCCCHHHHHHHHHHHHHHcCCCCCCCCceeec
Q psy247 74 YSWNVPKQLFHQLR---LYKSDSEQEMMRETCR-IASEGFKETIGFSKPGRTEHELFTKFDYEVRMRGAQILAYPPVVAS 149 (413)
Q Consensus 74 ~~~~d~~~~l~~~R---~vKs~~Ei~~~r~A~~-i~~~~~~~~~~~~~~G~tE~el~~~~~~~~~~~G~~~~~~~~iv~s 149 (413)
.+++-.+..+.-+| .|.|++.|+.||.--- +-+--++..+.+- +...- |+...+|.+|.+|
T Consensus 182 ~RviKs~~EieviRya~kISseaH~~vM~~~~pg~~Eyq~eslF~hh----------~y~~G-----GcRh~sYtcIc~s 246 (492)
T KOG2737|consen 182 CRVIKSSLEIEVIRYANKISSEAHIEVMRAVRPGMKEYQLESLFLHH----------SYSYG-----GCRHLSYTCICAS 246 (492)
T ss_pred heeeCCHHHHHHHHHHHhhccHHHHHHHHhCCchHhHHhHHHHHHHh----------hhccC-----Cccccccceeeec
Confidence 34444344444444 6889999988875321 1112222222211 00011 3445789999999
Q ss_pred CCCcccccc----ccCCcccccCcceecccccCCCCCCHHHHHhhhHHHHHhhcccccCCCceeccCCCccccccccCCc
Q psy247 150 GDNANVIHY----VHNNQKCCHGDLLLMDAGFSKPGRTEHELFTKFDYEVRMRGAQILAYPPVVASGDNANVIHYVHNNQ 225 (413)
Q Consensus 150 G~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g~~~~~~h~~~~~~ 225 (413)
|+|++++|| .++++.++.||++|+|+|.++..++ +|++.+||..+++..-|..-|..+..+.... ..
T Consensus 247 G~ns~vLHYgha~apNd~~iqdgd~cLfDmGaey~~ya-SDITcsFP~nGKFTadqk~VYnaVLda~nav--------m~ 317 (492)
T KOG2737|consen 247 GDNSAVLHYGHAGAPNDRTIQDGDLCLFDMGAEYHFYA-SDITCSFPVNGKFTADQKLVYNAVLDASNAV--------ME 317 (492)
T ss_pred CCCcceeeccccCCCCCcccCCCCEEEEecCcceeeee-cccceeccCCCccchhHHHHHHHHHHHHHHH--------HH
Confidence 999999999 9999999999999999999998764 8999999999998888887776555443211 12
Q ss_pred cccCCCEEEEecceeeCcEEeceEEEEeecCCCCHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHH------HHHHc
Q psy247 226 KCCHGDLLLMDAGCELNGYDSDITRTWPISGQFTDHQKVLYEIVLDTQLKLLKLCEKSDSALNFIYRYA------YVFQI 299 (413)
Q Consensus 226 ~i~~Gd~v~iD~g~~~~GY~aDitRT~~v~G~~~~~~~~~~~~~~~a~~~~~~~lkp~G~~~~ei~~~~------~~~~~ 299 (413)
.+++|. .. . +++.....+. ++.++-.|.--+|+.+.+ ....+
T Consensus 318 a~KpGv------------------------~W-~----Dmh~La~kvl---le~laq~gIl~gdvd~m~~ar~~~vF~PH 365 (492)
T KOG2737|consen 318 AMKPGV------------------------WW-V----DMHKLAEKVL---LEHLAQMGILKGDVDEMVEARLGAVFMPH 365 (492)
T ss_pred hcCCCC------------------------cc-c----cHHHHHHHHH---HHHHHhcCceeccHHHHHHhccCeeeccc
Confidence 356653 11 1 1222222222 222222155555666655 33445
Q ss_pred Cc----ccccccccccCC-CCccCCCCCC---CCCCCCCCcceecCCCCccccC
Q psy247 300 GF----KFCPHHSSHYLG-MDVHDCAAIP---RTIPVAPGVVFTVEPGMDVHDC 345 (413)
Q Consensus 300 g~----~~~~h~~GHgiG-l~~~E~p~~~---~~~~~~~g~~~~~~pg~~~~~~ 345 (413)
|. ....|.+|-..+ .+--+-|.+. ...+|-+||+.|+|||-||-++
T Consensus 366 GLGH~lGlDvHDvGGyp~~~~rp~~P~l~~LR~aR~L~e~MviTvEPGcYFi~~ 419 (492)
T KOG2737|consen 366 GLGHFLGLDVHDVGGYPEGVERPDEPGLRSLRTARHLKEGMVITVEPGCYFIDF 419 (492)
T ss_pred cccccccccccccCCCCCCCCCCCcchhhhhhhhhhhhcCcEEEecCChhHHHH
Confidence 53 345677776653 3222223322 2356789999999999998766
No 41
>KOG2414|consensus
Probab=98.18 E-value=1.3e-06 Score=86.24 Aligned_cols=179 Identities=26% Similarity=0.298 Sum_probs=122.1
Q ss_pred eeecCCCccccccccCCcccccCcceecccccCCCCCCHHHHHhhhHHHHHhhcccccCCCceeccCCCccccccccCCc
Q psy247 146 VVASGDNANVIHYVHNNQKCCHGDLLLMDAGFSKPGRTEHELFTKFDYEVRMRGAQILAYPPVVASGDNANVIHYVHNNQ 225 (413)
Q Consensus 146 iv~sG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g~~~~~~h~~~~~~ 225 (413)
+||.|.|+...||..+++.+.++|+||||||++..|+ -+|++|||+..++++..|..-|..+........
T Consensus 285 VVAgG~na~tIHY~~Nnq~l~d~emVLvDaGcelgGY-vSDITRTWP~sGkFs~~Qr~LYeavL~vq~eci--------- 354 (488)
T KOG2414|consen 285 VVAGGKNANTIHYVRNNQLLKDDEMVLVDAGCELGGY-VSDITRTWPISGKFSDAQRDLYEAVLQVQEECI--------- 354 (488)
T ss_pred eeecCcccceEEEeecccccCCCcEEEEecCcccCce-EccceeccCCCCccCcHHHHHHHHHHHHHHHHH---------
Confidence 4889999999999999999999999999999999986 489999999999999999888876654432211
Q ss_pred cccCCCEEEEecceeeCcEEeceEEEEeecCCCCHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHcCc-ccc
Q psy247 226 KCCHGDLLLMDAGCELNGYDSDITRTWPISGQFTDHQKVLYEIVLDTQLKLLKLCEKSDSALNFIYRYAYVFQIGF-KFC 304 (413)
Q Consensus 226 ~i~~Gd~v~iD~g~~~~GY~aDitRT~~v~G~~~~~~~~~~~~~~~a~~~~~~~lkp~G~~~~ei~~~~~~~~~g~-~~~ 304 (413)
+ || .+-+| -...++|....+....-+..+-. +.+-++ ++...+.-+ ...
T Consensus 355 --k---------------~c------~~~~g---~sL~~l~~~s~~Ll~~~Lk~lGI-~kt~~e---e~~~~~klcPHhV 404 (488)
T KOG2414|consen 355 --K---------------YC------KPSNG---TSLSQLFERSNELLGQELKELGI-RKTDRE---EMIQAEKLCPHHV 404 (488)
T ss_pred --H---------------hh------cCCCC---ccHHHHHHHHHHHHHHHHHHhCc-ccchHH---HHHhhhhcCCccc
Confidence 0 00 01112 13456777777777777777765 555555 111122112 233
Q ss_pred cccccccCCCCccCCCCCCCCCCCCCCcceecCCCCccccCCCCCCCCCCCCCcEEEeCCeeeEcCC
Q psy247 305 PHHSSHYLGMDVHDCAAIPRTIPVAPGVVFTVEPGMDVHDCAAIPRTIPVAPGMVFTVEPGVYISKD 371 (413)
Q Consensus 305 ~h~~GHgiGl~~~E~p~~~~~~~~~~g~~~~~~pg~~~~~~~~~~~~~~L~~GMv~~iEPgi~~~~~ 371 (413)
.|-+|--|- +.-..|... +|.||+++|||||+|.+..++...... |..+.||..+.+.++
T Consensus 405 gHyLGmDVH-D~p~v~r~~---pL~pg~ViTIEPGvYIP~d~d~P~~Fr---GIGiRIEDDV~i~ed 464 (488)
T KOG2414|consen 405 GHYLGMDVH-DCPTVSRDI---PLQPGMVITIEPGVYIPEDDDPPEEFR---GIGIRIEDDVAIGED 464 (488)
T ss_pred chhcCcccc-cCCCCCCCc---cCCCCceEEecCceecCccCCCchHhc---CceEEeecceEeccC
Confidence 444453332 222223221 357999999999999877654333343 999999999988876
No 42
>PRK13607 proline dipeptidase; Provisional
Probab=98.17 E-value=4.9e-07 Score=93.28 Aligned_cols=49 Identities=24% Similarity=0.409 Sum_probs=43.7
Q ss_pred CCceeecCCCccccccccCCc-ccccCcceecccccCCCCCCHHHHHhhhH
Q psy247 143 YPPVVASGDNANVIHYVHNNQ-KCCHGDLLLMDAGFSKPGRTEHELFTKFD 192 (413)
Q Consensus 143 ~~~iv~sG~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (413)
|.+|+++|+|++.+|+.++++ .++.||++++|+|+...+ |.+|++|||.
T Consensus 214 y~~iva~G~naa~~H~~~~~~~~~~~Gd~vliD~Ga~~~G-Y~sDiTRTf~ 263 (443)
T PRK13607 214 YGNIVALNEHAAVLHYTKLDHQAPAEMRSFLIDAGAEYNG-YAADITRTYA 263 (443)
T ss_pred CCcEEEecCcceEecCCccCCCCCCCCCEEEEEeeEEECC-EEecceEEEe
Confidence 578999999999999999885 579999999999999988 5789999884
No 43
>PRK07281 methionine aminopeptidase; Reviewed
Probab=98.09 E-value=8.4e-06 Score=79.43 Aligned_cols=198 Identities=17% Similarity=0.112 Sum_probs=105.6
Q ss_pred CCCCceeecCCCccccccccCCcccccCcceecccccC-CCCCCHHHHHhhhHHHHHhhcccccCCCceeccCCCccccc
Q psy247 141 LAYPPVVASGDNANVIHYVHNNQKCCHGDLLLMDAGFS-KPGRTEHELFTKFDYEVRMRGAQILAYPPVVASGDNANVIH 219 (413)
Q Consensus 141 ~~~~~iv~sG~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g~~~~~~h 219 (413)
.+|++++++|.|++.+|+.++++.++.||++++|.|+. .-+.+..|+++.+ |++.-++-..+...+
T Consensus 65 ~~f~~~v~~G~n~~~~H~~p~~~~l~~Gd~v~iD~g~~~~~~~y~~d~~~~~-------------~~~~~~~~~~~~~~~ 131 (286)
T PRK07281 65 MDYPYATCCGLNDEVAHAFPRHYILKEGDLLKVDMVLSEPLDKSIVDVSKLN-------------FDNVEQMKKYTESYR 131 (286)
T ss_pred cCCCcceEEeccccccCCCCCCcCcCCCCEEEEEeccccccccccccccccc-------------ccccccccccccccC
Confidence 68999999999999999999999999999999999874 2233345554311 111111111000000
Q ss_pred cccCCccccCCCEEEEecceee-CcEEeceEEEEeecCCCCHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHH
Q psy247 220 YVHNNQKCCHGDLLLMDAGCEL-NGYDSDITRTWPISGQFTDHQKVLYEIVLDTQLKLLKLCEKSDSALNFIYRYAYVFQ 298 (413)
Q Consensus 220 ~~~~~~~i~~Gd~v~iD~g~~~-~GY~aDitRT~~v~G~~~~~~~~~~~~~~~a~~~~~~~lkp~G~~~~ei~~~~~~~~ 298 (413)
+ -..|+.-.+ .|--++-.| +.-+..+++.+.++++.+.+...-.. +..+.++.+..-+..
T Consensus 132 g------------y~~D~~rT~~vG~~~~~~~------~l~~~~~ea~~~ai~~~kpG~~~~di-~~a~~~~~~~~G~~~ 192 (286)
T PRK07281 132 G------------GLADSCWAYAVGTPSDEVK------NLMDVTKEAMYRGIEQAVVGNRIGDI-GAAIQEYAESRGYGV 192 (286)
T ss_pred C------------EEeeeEEEEECCCCCHHHH------HHHHHHHHHHHHHHHHhcCCCcHHHH-HHHHHHHHHHcCCcc
Confidence 0 011111111 111111111 12234445555555554444444444 444555555431111
Q ss_pred cCcccccccccccCCCCccCCCCC--CCCCCCCCCcceecCCCCccccCCC---CCCCC---CCCCCcEEEeCCeeeEcC
Q psy247 299 IGFKFCPHHSSHYLGMDVHDCAAI--PRTIPVAPGVVFTVEPGMDVHDCAA---IPRTI---PVAPGMVFTVEPGVYISK 370 (413)
Q Consensus 299 ~g~~~~~h~~GHgiGl~~~E~p~~--~~~~~~~~g~~~~~~pg~~~~~~~~---~~~~~---~L~~GMv~~iEPgi~~~~ 370 (413)
-..+..|++|..+--.+.-.... ....+|+|||+|++|||+|+..... ..+.. .+.-+..+.+|-.+.+.+
T Consensus 193 -~~~~~GHGIGl~~hE~P~i~~~~~~~~~~~Le~GMV~tiEPgiy~~~~~~~~~~~~gw~~~~~~g~~gvr~EdtvlVT~ 271 (286)
T PRK07281 193 -VRDLVGHGVGPTMHEEPMVPNYGTAGRGLRLREGMVLTIEPMINTGTWEIDTDMKTGWAHKTLDGGLSCQYEHQFVITK 271 (286)
T ss_pred -CCCeeeeeCCCccCCCCcCCCcccCCCCCEECCCCEEEECCeeEcCCcceecccCCCceEEecCCCcEEEeccEEEEeC
Confidence 12456788887766443322211 1235689999999999998632210 01112 233467789998888877
Q ss_pred C
Q psy247 371 D 371 (413)
Q Consensus 371 ~ 371 (413)
+
T Consensus 272 ~ 272 (286)
T PRK07281 272 D 272 (286)
T ss_pred C
Confidence 6
No 44
>PRK12897 methionine aminopeptidase; Reviewed
Probab=98.07 E-value=1e-06 Score=84.09 Aligned_cols=51 Identities=16% Similarity=0.247 Sum_probs=43.5
Q ss_pred CCCCceeecCCCccccccccCCcccccCcceecccccCCCCCCHHHHHhhhH
Q psy247 141 LAYPPVVASGDNANVIHYVHNNQKCCHGDLLLMDAGFSKPGRTEHELFTKFD 192 (413)
Q Consensus 141 ~~~~~iv~sG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (413)
..|++++.+|.|++.+|+.++++.++.||++++|.|+...++. +|++|||.
T Consensus 61 ~~~~~~i~~g~n~~~~H~~p~~~~l~~Gd~V~iD~g~~~~GY~-sD~tRT~~ 111 (248)
T PRK12897 61 NGYPYAICASVNDEMCHAFPADVPLTEGDIVTIDMVVNLNGGL-SDSAWTYR 111 (248)
T ss_pred CCCCcceEeccCCEeecCCCCCcccCCCCEEEEEeeEEECCEE-EEEEEEEE
Confidence 4678888999999999999999999999999999999887764 66666553
No 45
>cd01090 Creatinase Creatine amidinohydrolase. E.C.3.5.3.3. Hydrolyzes creatine to sarcosine and urea.
Probab=98.06 E-value=1.2e-06 Score=82.67 Aligned_cols=159 Identities=18% Similarity=0.185 Sum_probs=97.5
Q ss_pred CCceeecCCCccccccccCCcccccCcceecccccCCCCCCHHHHHhhhHHHHHhhcccccCCCceeccCCCcccccccc
Q psy247 143 YPPVVASGDNANVIHYVHNNQKCCHGDLLLMDAGFSKPGRTEHELFTKFDYEVRMRGAQILAYPPVVASGDNANVIHYVH 222 (413)
Q Consensus 143 ~~~iv~sG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g~~~~~~h~~~ 222 (413)
+.+++++|+|++.+|+.+++++++.||++++|.|+...++ -.|+++||.. |. |
T Consensus 55 ~~~~v~~G~~~~~~H~~~~~r~l~~GD~v~~d~g~~~~GY-~ad~~RT~~v------------------G~--------~ 107 (228)
T cd01090 55 TWTWFQSGINTDGAHNPVTNRKVQRGDILSLNCFPMIAGY-YTALERTLFL------------------DE--------V 107 (228)
T ss_pred cceEEEeeccccccCCCCCCcccCCCCEEEEEEeEEECCE-eeeeEEEEEC------------------CC--------C
Confidence 3478999999999999999999999999999998877775 3445444321 10 0
Q ss_pred CCccccCCCEEEEecceeeCcEEeceEEEEeecCCCCHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHH-----HHH
Q psy247 223 NNQKCCHGDLLLMDAGCELNGYDSDITRTWPISGQFTDHQKVLYEIVLDTQLKLLKLCEKSDSALNFIYRYA-----YVF 297 (413)
Q Consensus 223 ~~~~i~~Gd~v~iD~g~~~~GY~aDitRT~~v~G~~~~~~~~~~~~~~~a~~~~~~~lkp~G~~~~ei~~~~-----~~~ 297 (413)
+.+. -+.-+..+++.+.++++.+.+...... ...+.++.+.. ...
T Consensus 108 ~~~~-----------------------------~~~~~~~~ea~~~~~~~~rpG~~~~~v-~~a~~~~~~~~G~~~~~~~ 157 (228)
T cd01090 108 SDAH-----------------------------LKIWEANVAVHERGLELIKPGARCKDI-AAELNEMYREHDLLRYRTF 157 (228)
T ss_pred CHHH-----------------------------HHHHHHHHHHHHHHHHHcCCCCcHHHH-HHHHHHHHHHcCCCccccc
Confidence 0000 011244455555555555555555445 55555555544 112
Q ss_pred HcCc--ccccccccccCCCCccCCCCCCCCCCCCCCcceecCCCCccccCCCCCCCCCCCCC-cEEEeCCeeeEcCC
Q psy247 298 QIGF--KFCPHHSSHYLGMDVHDCAAIPRTIPVAPGVVFTVEPGMDVHDCAAIPRTIPVAPG-MVFTVEPGVYISKD 371 (413)
Q Consensus 298 ~~g~--~~~~h~~GHgiGl~~~E~p~~~~~~~~~~g~~~~~~pg~~~~~~~~~~~~~~L~~G-Mv~~iEPgi~~~~~ 371 (413)
..|+ ....|-.+|+.|+.+++.. ..+|+|||+|++|||+|.... .+| -.+.+|-.+.+.++
T Consensus 158 ~~GHgiGl~~he~~~~~g~~~~~~~----~~~Le~GMV~~iEP~i~~~~~---------~~g~gG~ried~v~Vt~~ 221 (228)
T cd01090 158 GYGHSFGVLSHYYGREAGLELREDI----DTVLEPGMVVSMEPMIMLPEG---------QPGAGGYREHDILVINEN 221 (228)
T ss_pred ccCcccccccccCCCccccccCCCC----CCccCCCCEEEECCEEeeccc---------CCCCcEEEeeeEEEECCC
Confidence 2233 2345666677776655432 245899999999999874321 012 36678877777665
No 46
>TIGR00500 met_pdase_I methionine aminopeptidase, type I. Methionine aminopeptidase is a cobalt-binding enzyme. Bacterial and organellar examples (type I) differ from eukaroytic and archaeal (type II) examples in lacking a region of approximately 60 amino acids between the 4th and 5th cobalt-binding ligands. This model describes type I. The role of this protein in general is to produce the mature form of cytosolic proteins by removing the N-terminal methionine.
Probab=97.96 E-value=1.2e-06 Score=83.51 Aligned_cols=51 Identities=24% Similarity=0.331 Sum_probs=43.3
Q ss_pred CCCCceeecCCCccccccccCCcccccCcceecccccCCCCCCHHHHHhhhH
Q psy247 141 LAYPPVVASGDNANVIHYVHNNQKCCHGDLLLMDAGFSKPGRTEHELFTKFD 192 (413)
Q Consensus 141 ~~~~~iv~sG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (413)
..|++++++|.|+..+|+.++++.++.||++++|.|+...++ .+|+++||.
T Consensus 60 ~~~~~~~~~~~n~~~~H~~~~~~~l~~Gd~v~iD~g~~~~gY-~aD~~RT~~ 110 (247)
T TIGR00500 60 YGFPGSVCISVNEVVIHGIPDKKVLKDGDIVNIDVGVIYDGY-HGDTAKTFL 110 (247)
T ss_pred CCCCceeEeccccEEEecCCCCcccCCCCEEEEEEEEEECCE-EEEEEEEEE
Confidence 367888899999999999999999999999999999988774 566666553
No 47
>cd01087 Prolidase Prolidase. E.C. 3.4.13.9. Also known as Xaa-Pro dipeptidase, X-Pro dipeptidase, proline dipeptidase., imidodipeptidase, peptidase D, gamma-peptidase. Catalyses hydrolysis of Xaa-Pro dipeptides; also acts on aminoacyl-hydroxyproline analogs. No action on Pro-Pro.
Probab=97.69 E-value=3.1e-05 Score=73.45 Aligned_cols=45 Identities=44% Similarity=0.732 Sum_probs=38.3
Q ss_pred eecCCCccccccccCCcccccCcceecccccCCCCCCHHHHHhhhH
Q psy247 147 VASGDNANVIHYVHNNQKCCHGDLLLMDAGFSKPGRTEHELFTKFD 192 (413)
Q Consensus 147 v~sG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (413)
+++|.|++.+|+.++++.++.||++++|.|+...++ ..|++|||.
T Consensus 52 v~~g~~~~~~H~~~~~~~l~~Gd~v~vD~g~~~~GY-~ad~~Rt~~ 96 (243)
T cd01087 52 VAAGSNAAILHYVHNDQPLKDGDLVLIDAGAEYGGY-ASDITRTFP 96 (243)
T ss_pred EEECCCccccCCCcCCCcCCCCCEEEEEeCceECCE-eeeeeEEEE
Confidence 578999999999999999999999999999998875 466666653
No 48
>PRK12318 methionine aminopeptidase; Provisional
Probab=97.36 E-value=5.3e-05 Score=74.05 Aligned_cols=50 Identities=16% Similarity=0.227 Sum_probs=43.1
Q ss_pred CCCCceeecCCCccccccccCCcccccCcceecccccCCCCCCHHHHHhhh
Q psy247 141 LAYPPVVASGDNANVIHYVHNNQKCCHGDLLLMDAGFSKPGRTEHELFTKF 191 (413)
Q Consensus 141 ~~~~~iv~sG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (413)
.+|++++++|.|+..+|+.++++.++.||++++|.|+...++ .+|+++||
T Consensus 102 ~~f~~~v~~g~n~~~~H~~p~~~~l~~GD~V~vD~g~~~~GY-~aDitRT~ 151 (291)
T PRK12318 102 PPFPKTICTSLNEVICHGIPNDIPLKNGDIMNIDVSCIVDGY-YGDCSRMV 151 (291)
T ss_pred CCCCcceEeeccceeecCCCCCCccCCCCEEEEEEeEEECcE-EEEEEEEE
Confidence 478889999999999999999999999999999999888774 45666655
No 49
>PRK15173 peptidase; Provisional
Probab=97.12 E-value=0.00013 Score=72.49 Aligned_cols=37 Identities=27% Similarity=0.511 Sum_probs=30.5
Q ss_pred cccccCCcccccCcceecccccCCCCCCHHHHHhhhHH
Q psy247 156 IHYVHNNQKCCHGDLLLMDAGFSKPGRTEHELFTKFDY 193 (413)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (413)
+|..++++.++.||++++|.|+...++ .+|++|||.+
T Consensus 161 ~h~~~~~~~l~~Gd~V~iD~g~~~~GY-~aDitRT~~v 197 (323)
T PRK15173 161 PKLIPSNTKACSGDLIKFDCGVDVDGY-GADIARTFVV 197 (323)
T ss_pred cCCCCCCCccCCCCEEEEEeCccCCCE-eeeeEEEEEc
Confidence 467778889999999999999988886 5788777644
No 50
>PRK14575 putative peptidase; Provisional
Probab=96.86 E-value=0.00029 Score=72.12 Aligned_cols=37 Identities=27% Similarity=0.512 Sum_probs=30.1
Q ss_pred ccccccCCcccccCcceecccccCCCCCCHHHHHhhhH
Q psy247 155 VIHYVHNNQKCCHGDLLLMDAGFSKPGRTEHELFTKFD 192 (413)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (413)
.+|+.+++++++.||++++|.|+.+.++ .+|++|||.
T Consensus 243 ~~h~~~~~~~l~~Gd~v~iD~g~~~~GY-~sditRT~~ 279 (406)
T PRK14575 243 SPKLIPSNTKACSGDLIKFDCGVDVDGY-GADIARTFV 279 (406)
T ss_pred ccCCCCCCCcCCCCCEEEEEeceEECCE-eeeeEEEEE
Confidence 3588889999999999999999888775 467766654
No 51
>PLN03158 methionine aminopeptidase; Provisional
Probab=96.85 E-value=0.0089 Score=60.89 Aligned_cols=110 Identities=15% Similarity=0.173 Sum_probs=75.2
Q ss_pred EEeceEEEEeecCCCC--HHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHH--HHHHcCc-cc------ccccccccC
Q psy247 244 YDSDITRTWPISGQFT--DHQKVLYEIVLDTQLKLLKLCEKSDSALNFIYRYA--YVFQIGF-KF------CPHHSSHYL 312 (413)
Q Consensus 244 Y~aDitRT~~v~G~~~--~~~~~~~~~~~~a~~~~~~~lkp~G~~~~ei~~~~--~~~~~g~-~~------~~h~~GHgi 312 (413)
.++++.|+..+ ..+. +.+|++.+.+.++++++.+++|| |++-.||.+.+ .+.+.|. .. |+..+ ..
T Consensus 127 ~~~~~~~~~~I-Ksp~EIe~mR~A~~ia~~al~~a~~~irp-GvTe~EI~~~v~~~~~~~Ga~ps~l~y~~fp~sv--ct 202 (396)
T PLN03158 127 PNSDLQHSVEI-KTPEQIQRMRETCRIAREVLDAAARAIKP-GVTTDEIDRVVHEATIAAGGYPSPLNYHFFPKSC--CT 202 (396)
T ss_pred cccccccceee-CCHHHHHHHHHHHHHHHHHHHHHHHHccC-CCCHHHHHHHHHHHHHHcCCccccccccCCCcee--ee
Confidence 35667777777 6654 45578888999999999999999 99999999987 4455542 10 11111 11
Q ss_pred CCCccCCCCCCCCCCCCCCcceecCCCCccccCCCCCCCCCCCCCcEEEeCCeeeEcCCCCCcccccccceEEEceeEEE
Q psy247 313 GMDVHDCAAIPRTIPVAPGVVFTVEPGMDVHDCAAIPRTIPVAPGMVFTVEPGVYISKDCKETRPEFRGMGIRIEDDILI 392 (413)
Q Consensus 313 Gl~~~E~p~~~~~~~~~~g~~~~~~pg~~~~~~~~~~~~~~L~~GMv~~iEPgi~~~~~~~~~~~~~~~~gvriED~vlV 392 (413)
|.+ + .+. .| ..++++|++|+++.++.+.+..+ +-.-+..|++|
T Consensus 203 s~N--~--~i~--------------Hg--------ip~~r~L~~GDiV~iDvg~~~~G-----------Y~aD~tRT~~V 245 (396)
T PLN03158 203 SVN--E--VIC--------------HG--------IPDARKLEDGDIVNVDVTVYYKG-----------CHGDLNETFFV 245 (396)
T ss_pred ccc--c--ccc--------------CC--------CCCCccCCCCCEEEEEEeEEECC-----------EEEeEEeEEEc
Confidence 111 1 000 01 34578999999999999998754 56688999999
Q ss_pred eC
Q psy247 393 DK 394 (413)
Q Consensus 393 t~ 394 (413)
++
T Consensus 246 G~ 247 (396)
T PLN03158 246 GN 247 (396)
T ss_pred CC
Confidence 65
No 52
>cd01086 MetAP1 Methionine Aminopeptidase 1. E.C. 3.4.11.18. Also known as methionyl aminopeptidase and Peptidase M. Catalyzes release of N-terminal amino acids, preferentially methionine, from peptides and arylamides.
Probab=96.63 E-value=0.021 Score=53.81 Aligned_cols=97 Identities=13% Similarity=0.169 Sum_probs=66.7
Q ss_pred HHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHH--HHHHcCccccc---ccccc--cCCCCccCCCCCCCCCCCCCCc
Q psy247 260 DHQKVLYEIVLDTQLKLLKLCEKSDSALNFIYRYA--YVFQIGFKFCP---HHSSH--YLGMDVHDCAAIPRTIPVAPGV 332 (413)
Q Consensus 260 ~~~~~~~~~~~~a~~~~~~~lkp~G~~~~ei~~~~--~~~~~g~~~~~---h~~GH--giGl~~~E~p~~~~~~~~~~g~ 332 (413)
+.+|++.+.+.++++++.++++| |++..||..++ .+.+.|..... +.... ..|.+ . .++
T Consensus 2 ~~lr~A~~i~~~~~~~~~~~~~p-G~tE~ev~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~--~--~~~--------- 67 (238)
T cd01086 2 EGMREAGRIVAEVLDELAKAIKP-GVTTKELDQIAHEFIEEHGAYPAPLGYYGFPKSICTSVN--E--VVC--------- 67 (238)
T ss_pred HHHHHHHHHHHHHHHHHHHHccC-CCCHHHHHHHHHHHHHHcCCCcccccCCCCCcceecCCC--C--cee---------
Confidence 45789999999999999999999 99999999887 55566652111 00000 01111 0 000
Q ss_pred ceecCCCCccccCCCCCCCCCCCCCcEEEeCCeeeEcCCCCCcccccccceEEEceeEEEeC
Q psy247 333 VFTVEPGMDVHDCAAIPRTIPVAPGMVFTVEPGVYISKDCKETRPEFRGMGIRIEDDILIDK 394 (413)
Q Consensus 333 ~~~~~pg~~~~~~~~~~~~~~L~~GMv~~iEPgi~~~~~~~~~~~~~~~~gvriED~vlVt~ 394 (413)
| ..+.+.+|++|+++.++.+....+ +...++.|+.+++
T Consensus 68 ----------h---~~~~~~~l~~Gd~v~id~g~~~~G-----------Y~ad~~RT~~~G~ 105 (238)
T cd01086 68 ----------H---GIPDDRVLKDGDIVNIDVGVELDG-----------YHGDSARTFIVGE 105 (238)
T ss_pred ----------C---CCCCCcccCCCCEEEEEEEEEECC-----------EEEEEEEEEECCC
Confidence 0 023578999999999999876543 6778999999975
No 53
>cd01085 APP X-Prolyl Aminopeptidase 2. E.C. 3.4.11.9. Also known as X-Pro aminopeptidase, proline aminopeptidase, aminopeptidase P, and aminoacylproline aminopeptidase. Catalyses release of any N-terminal amino acid, including proline, that is linked with proline, even from a dipeptide or tripeptide.
Probab=96.33 E-value=0.0019 Score=60.75 Aligned_cols=50 Identities=20% Similarity=0.376 Sum_probs=44.7
Q ss_pred CCCceeecCCCccccccccC---CcccccCcceecccccCCCCCCHHHHHhhhH
Q psy247 142 AYPPVVASGDNANVIHYVHN---NQKCCHGDLLLMDAGFSKPGRTEHELFTKFD 192 (413)
Q Consensus 142 ~~~~iv~sG~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (413)
+|++++++|+|++.+|+.++ ++.++.||++++|.|+...++ ..|+++||.
T Consensus 53 ~f~~~v~~g~n~~~~H~~p~~~~~r~l~~GD~V~iD~g~~~~gY-~aD~~RT~~ 105 (224)
T cd01085 53 SFDTISGFGPNGAIVHYSPTEESNRKISPDGLYLIDSGGQYLDG-TTDITRTVH 105 (224)
T ss_pred CcceEEEecCccCcCCCCcCcccCcccCCCCEEEEEeCccCCCc-ccccEEeec
Confidence 47899999999999999999 899999999999999999885 578877764
No 54
>PF01321 Creatinase_N: Creatinase/Prolidase N-terminal domain; InterPro: IPR000587 Creatinase or creatine amidinohydrolase (3.5.3.3 from EC) catalyses the conversion of creatine and water to sarcosine and urea. The enzyme works as a homodimer, and is induced by choline chloride. Each monomer of creatinase has two clearly defined domains, a small N-terminal domain, and a large C-terminal domain. The structure of the C-terminal region represents the "pita-bread" fold. The fold contains both alpha helices and an anti-parallel beta sheet within two structurally similar domains that are thought to be derived from an ancient gene duplication. The active site, where conserved, is located between the two domains. The fold is common to methionine aminopeptidase (3.4.11.18 from EC), aminopeptidase P (3.4.11.9 from EC), prolidase (3.4.13.9 from EC), agropine synthase and creatinase (3.5.3.3 from EC). Though many of these peptidases require a divalent cation, creatinase is not a metal-dependent enzyme [, , ]. ; GO: 0016787 hydrolase activity; PDB: 1PV9_A 3CTZ_A 3IL0_B 3PN9_A 2HOW_A 1WN1_B 3I7M_A 1CHM_B 3QOC_D 1KP0_B ....
Probab=96.27 E-value=0.0024 Score=53.91 Aligned_cols=78 Identities=17% Similarity=0.301 Sum_probs=49.6
Q ss_pred eeeeecCceEEecCC---CCCCEEEE-EEcCCCCCceEEEEEeCcchh---hhc--------cCC---------------
Q psy247 7 YIFRQNTDFFYFTGC---LEPDSAVV-IHGASDENFKSELFVKRKDAK---AEL--------WDG--------------- 56 (413)
Q Consensus 7 ~~f~q~~n~~YltG~---~~~~~~lv-~~~~~~~~~~~~l~v~~~~~~---~~~--------~~~--------------- 56 (413)
+.+.++.|++||||+ ....++++ ++.++ .+|++++.+.. .+. |..
T Consensus 17 lll~~~~ni~YltG~~~~~~~~~~~l~i~~~~-----~~l~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~~ 91 (132)
T PF01321_consen 17 LLLTSPENIRYLTGFRWQPGERPVLLVITADG-----AVLFVPKGEYERAAEESAPDDEVVEYEDPYEAIAEALKKLGPE 91 (132)
T ss_dssp EEEESHHHHHHHHS--ST-TSSEEEEEEESSS-----EEEEEEGGGHHHHHHHHTTSSEEEEESTHHHHHHHHHHHHTTT
T ss_pred EEEcChhhceEecCCCcCCCcceEEEEecccC-----cEEEeccccHHHHHHhhcCCceEEEEecccchHHHHHHHhCCC
Confidence 677888999999999 54555555 77764 48999855432 111 111
Q ss_pred -CcccHh-------hHhhhcCCCCCCcccchHHHHHHHHcc
Q psy247 57 -PRTGKA-------QLNGYVPRRKDYSWNVPKQLFHQLRLY 89 (413)
Q Consensus 57 -~~~~~~-------~~~~~l~~~~~~~~~d~~~~l~~~R~v 89 (413)
.++++| .+..+...+|+.+++|+++++.++|+|
T Consensus 92 ~~~igve~~~~~~~~~~~l~~~~~~~~~v~~~~~i~~~R~I 132 (132)
T PF01321_consen 92 GKRIGVEPDSLSAAEYQRLQEALPGAEFVDASPLIEELRMI 132 (132)
T ss_dssp TSEEEEETTTSBHHHHHHHHHHSTTSEEEEEHHHHHHHHTS
T ss_pred CCEEEEcCCcChHHHHHHHHHhCCCCEEEEcHHHHHHcCcC
Confidence 122222 234444456788999999999999986
No 55
>PRK05716 methionine aminopeptidase; Validated
Probab=95.85 E-value=0.083 Score=50.16 Aligned_cols=96 Identities=10% Similarity=0.072 Sum_probs=63.4
Q ss_pred HHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHH--HHHHcCcc-ccccccccc----CCCCccCCCCCCCCCCCCCCcc
Q psy247 261 HQKVLYEIVLDTQLKLLKLCEKSDSALNFIYRYA--YVFQIGFK-FCPHHSSHY----LGMDVHDCAAIPRTIPVAPGVV 333 (413)
Q Consensus 261 ~~~~~~~~~~~a~~~~~~~lkp~G~~~~ei~~~~--~~~~~g~~-~~~h~~GHg----iGl~~~E~p~~~~~~~~~~g~~ 333 (413)
.+|++.+.+.+++++++++++| |++..|+..++ .+.+.|.. .+.+..++. .|.+ . ..+
T Consensus 13 ~~r~A~~i~~~~~~~a~~~i~p-G~se~ela~~~~~~~~~~G~~~~~~~~~~~~~~~~~g~~--~--~~~---------- 77 (252)
T PRK05716 13 KMRVAGRLAAEVLDEIEPHVKP-GVTTKELDRIAEEYIRDQGAIPAPLGYHGFPKSICTSVN--E--VVC---------- 77 (252)
T ss_pred HHHHHHHHHHHHHHHHHHHccC-CCCHHHHHHHHHHHHHHCCCEecccCCCCCCcCeEeccc--c--eee----------
Confidence 4478889999999999999999 99999999877 55555642 111000110 0110 0 000
Q ss_pred eecCCCCccccCCCCCCCCCCCCCcEEEeCCeeeEcCCCCCcccccccceEEEceeEEEeC
Q psy247 334 FTVEPGMDVHDCAAIPRTIPVAPGMVFTVEPGVYISKDCKETRPEFRGMGIRIEDDILIDK 394 (413)
Q Consensus 334 ~~~~pg~~~~~~~~~~~~~~L~~GMv~~iEPgi~~~~~~~~~~~~~~~~gvriED~vlVt~ 394 (413)
+ ..+.+.+|++|++|.++.+..+.+ +..-+.-|+++.+
T Consensus 78 ---------h---~~~~~~~l~~Gd~v~id~g~~~~g-----------Y~~d~~RT~~vG~ 115 (252)
T PRK05716 78 ---------H---GIPSDKVLKEGDIVNIDVTVIKDG-----------YHGDTSRTFGVGE 115 (252)
T ss_pred ---------c---CCCCCcccCCCCEEEEEEEEEECC-----------EEEEeEEEEECCC
Confidence 0 023568999999999999987643 6777888888854
No 56
>cd01088 MetAP2 Methionine Aminopeptidase 2. E.C. 3.4.11.18. Also known as methionyl aminopeptidase and peptidase M. Catalyzes release of N-terminal amino acids, preferentially methionine, from peptides and arylamides.
Probab=95.53 E-value=0.13 Score=50.30 Aligned_cols=97 Identities=12% Similarity=0.139 Sum_probs=63.6
Q ss_pred HHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHH--HHHHcCcccccccccccCCCCccCCCCCCCCCCCCCCcceecC
Q psy247 260 DHQKVLYEIVLDTQLKLLKLCEKSDSALNFIYRYA--YVFQIGFKFCPHHSSHYLGMDVHDCAAIPRTIPVAPGVVFTVE 337 (413)
Q Consensus 260 ~~~~~~~~~~~~a~~~~~~~lkp~G~~~~ei~~~~--~~~~~g~~~~~h~~GHgiGl~~~E~p~~~~~~~~~~g~~~~~~ 337 (413)
+.++++.+.+.++.+++++.++| |++..|+.+.+ .+.+.|.. .++.+++.+.+. .+.+.
T Consensus 2 ~~~r~Aa~I~~~a~~~~~~~i~p-G~te~ei~~~~~~~i~~~G~~-----~afp~~is~n~~--~~H~~----------- 62 (291)
T cd01088 2 EKYREAGEIHRQVRKYAQSLIKP-GMTLLEIAEFVENRIRELGAG-----PAFPVNLSINEC--AAHYT----------- 62 (291)
T ss_pred HHHHHHHHHHHHHHHHHHHHccC-CCcHHHHHHHHHHHHHHcCCC-----CCCCceeccCCE--eeCCC-----------
Confidence 45788999999999999999999 99999999888 45565531 112222222111 11010
Q ss_pred CCCccccCCCCCCCCCCCCCcEEEeCCeeeEcCCCCCcccccccceEEEceeEEEeC
Q psy247 338 PGMDVHDCAAIPRTIPVAPGMVFTVEPGVYISKDCKETRPEFRGMGIRIEDDILIDK 394 (413)
Q Consensus 338 pg~~~~~~~~~~~~~~L~~GMv~~iEPgi~~~~~~~~~~~~~~~~gvriED~vlVt~ 394 (413)
|. .+++.+|++|+++.++.|..+.+ +-.-+.-|+.+.+
T Consensus 63 p~--------~~d~~~l~~GDvV~iD~G~~~dG-----------Y~sD~arT~~vg~ 100 (291)
T cd01088 63 PN--------AGDDTVLKEGDVVKLDFGAHVDG-----------YIADSAFTVDFDP 100 (291)
T ss_pred CC--------CCCCcccCCCCEEEEEEEEEECC-----------EEEEEEEEEecCh
Confidence 00 23467899999999999987654 4455556666653
No 57
>PRK12896 methionine aminopeptidase; Reviewed
Probab=95.49 E-value=0.1 Score=49.61 Aligned_cols=108 Identities=14% Similarity=0.110 Sum_probs=68.6
Q ss_pred eEEEEeecCCCCH--HHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHH--HHHHcCccccccc---ccc--cCCCCccC
Q psy247 248 ITRTWPISGQFTD--HQKVLYEIVLDTQLKLLKLCEKSDSALNFIYRYA--YVFQIGFKFCPHH---SSH--YLGMDVHD 318 (413)
Q Consensus 248 itRT~~v~G~~~~--~~~~~~~~~~~a~~~~~~~lkp~G~~~~ei~~~~--~~~~~g~~~~~h~---~GH--giGl~~~E 318 (413)
-.|++.+ ..+.+ ..|++.+.+.++..++++.++| |++-.|+...+ .+.+.|.....+. +.. ..|.+. .
T Consensus 4 ~~~~~~v-Ks~~Ei~~~r~a~~i~~~~~~~~~~~i~p-G~te~el~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~n~-~ 80 (255)
T PRK12896 4 EGRGMEI-KSPRELEKMRKIGRIVATALKEMGKAVEP-GMTTKELDRIAEKRLEEHGAIPSPEGYYGFPGSTCISVNE-E 80 (255)
T ss_pred cCCceeE-CCHHHHHHHHHHHHHHHHHHHHHHhhccC-CCCHHHHHHHHHHHHHHCCCEeCcccCCCCCcceEecCCC-e
Confidence 3577777 55433 4467888888888889999999 99999998877 4556664211100 000 011110 0
Q ss_pred CCCCCCCCCCCCCcceecCCCCccccCCCCCCCCCCCCCcEEEeCCeeeEcCCCCCcccccccceEEEceeEEEeC
Q psy247 319 CAAIPRTIPVAPGVVFTVEPGMDVHDCAAIPRTIPVAPGMVFTVEPGVYISKDCKETRPEFRGMGIRIEDDILIDK 394 (413)
Q Consensus 319 ~p~~~~~~~~~~g~~~~~~pg~~~~~~~~~~~~~~L~~GMv~~iEPgi~~~~~~~~~~~~~~~~gvriED~vlVt~ 394 (413)
.+. ..+.+.+|++|.++.++.+..+.+ +..-+.-|+++.+
T Consensus 81 ~~h-------------------------~~p~~~~l~~Gd~v~iD~g~~~~g-----------Y~aD~~RT~~vG~ 120 (255)
T PRK12896 81 VAH-------------------------GIPGPRVIKDGDLVNIDVSAYLDG-----------YHGDTGITFAVGP 120 (255)
T ss_pred eEe-------------------------cCCCCccCCCCCEEEEEEeEEECc-----------EEEeeEEEEECCC
Confidence 000 023468899999999999886543 5667788888764
No 58
>KOG2738|consensus
Probab=95.26 E-value=0.088 Score=50.72 Aligned_cols=93 Identities=13% Similarity=0.230 Sum_probs=65.8
Q ss_pred HHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHH--HHHHcC-c------ccccccccccCCCCccCCCCCCCCCCCCCCc
Q psy247 262 QKVLYEIVLDTQLKLLKLCEKSDSALNFIYRYA--YVFQIG-F------KFCPHHSSHYLGMDVHDCAAIPRTIPVAPGV 332 (413)
Q Consensus 262 ~~~~~~~~~~a~~~~~~~lkp~G~~~~ei~~~~--~~~~~g-~------~~~~h~~GHgiGl~~~E~p~~~~~~~~~~g~ 332 (413)
+|++.+..++..+.+..++|| |++..||.+++ ...+.| | -.||.++--++- |.--
T Consensus 125 mR~ac~LarevLd~Aa~~v~P-gvTTdEiD~~VH~a~Ierg~YPSPLnYy~FPKS~CTSVN----EviC----------- 188 (369)
T KOG2738|consen 125 MRKACRLAREVLDYAATLVRP-GVTTDEIDRAVHNAIIERGAYPSPLNYYGFPKSVCTSVN----EVIC----------- 188 (369)
T ss_pred HHHHHHHHHHHHHHHhhhcCC-CccHHHHHHHHHHHHHhcCCcCCCcccCCCchhhhcchh----heee-----------
Confidence 467888889999999999999 99999999998 444444 2 235555554432 2110
Q ss_pred ceecCCCCccccCCCCCCCCCCCCCcEEEeCCeeeEcCCCCCcccccccceEEEceeEEEeC
Q psy247 333 VFTVEPGMDVHDCAAIPRTIPVAPGMVFTVEPGVYISKDCKETRPEFRGMGIRIEDDILIDK 394 (413)
Q Consensus 333 ~~~~~pg~~~~~~~~~~~~~~L~~GMv~~iEPgi~~~~~~~~~~~~~~~~gvriED~vlVt~ 394 (413)
-| +++.++||.|..+.|...+|..+- =--+.+|++|++
T Consensus 189 -----HG--------IPD~RpLedGDIvNiDVtvY~~Gy-----------HGDlneTffvG~ 226 (369)
T KOG2738|consen 189 -----HG--------IPDSRPLEDGDIVNIDVTVYLNGY-----------HGDLNETFFVGN 226 (369)
T ss_pred -----cC--------CCCcCcCCCCCEEeEEEEEEeccc-----------cCccccceEeec
Confidence 11 456789999999999999997652 123567888765
No 59
>COG0006 PepP Xaa-Pro aminopeptidase [Amino acid transport and metabolism]
Probab=94.68 E-value=0.031 Score=56.70 Aligned_cols=25 Identities=36% Similarity=0.626 Sum_probs=21.3
Q ss_pred CCCCCHHHHHhhhHHHHHhhccccc
Q psy247 179 KPGRTEHELFTKFDYEVRMRGAQIL 203 (413)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (413)
.++++|.++.+.+++..++.|+...
T Consensus 182 ~~g~tE~ev~a~l~~~~~~~G~~~~ 206 (384)
T COG0006 182 RPGMTEAEIAAELEYALRKGGAEGP 206 (384)
T ss_pred cCCCcHHHHHHHHHHHHHHcCCCcc
Confidence 3788999999999999999986543
No 60
>PRK10879 proline aminopeptidase P II; Provisional
Probab=93.98 E-value=0.055 Score=56.03 Aligned_cols=23 Identities=30% Similarity=0.400 Sum_probs=19.5
Q ss_pred CCCCCCHHHHHhhhHHHHHhhcc
Q psy247 178 SKPGRTEHELFTKFDYEVRMRGA 200 (413)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~ 200 (413)
.++|++|.++.+.+.+.++..|+
T Consensus 200 ~~pG~tE~ei~a~~~~~~~~~G~ 222 (438)
T PRK10879 200 CRPGMFEYQLEGEIHHEFNRHGA 222 (438)
T ss_pred cCCCCcHHHHHHHHHHHHHHCCC
Confidence 45789999999999999888764
No 61
>cd01092 APP-like Similar to Prolidase and Aminopeptidase P. The members of this subfamily presumably catalyse hydrolysis of Xaa-Pro dipeptides and/or release of any N-terminal amino acid, including proline, that is linked with proline.
Probab=93.93 E-value=0.53 Score=42.92 Aligned_cols=96 Identities=9% Similarity=0.057 Sum_probs=62.9
Q ss_pred HHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHH--HHHHcCcccccccccccCCCCccCCCCCCCCCCCCCCcceecCC
Q psy247 261 HQKVLYEIVLDTQLKLLKLCEKSDSALNFIYRYA--YVFQIGFKFCPHHSSHYLGMDVHDCAAIPRTIPVAPGVVFTVEP 338 (413)
Q Consensus 261 ~~~~~~~~~~~a~~~~~~~lkp~G~~~~ei~~~~--~~~~~g~~~~~h~~GHgiGl~~~E~p~~~~~~~~~~g~~~~~~p 338 (413)
..|++.+.+.++..++.+.++| |++-.||...+ .+.+.|...+.+..--..|..- ..+..
T Consensus 3 ~~r~a~~i~~~~~~~~~~~~~~-G~te~ei~~~~~~~~~~~g~~~~~~~~~v~~g~~~-~~~h~---------------- 64 (208)
T cd01092 3 LLRKAARIADKAFEELLEFIKP-GMTEREVAAELEYFMRKLGAEGPSFDTIVASGPNS-ALPHG---------------- 64 (208)
T ss_pred HHHHHHHHHHHHHHHHHHHCcC-CCCHHHHHHHHHHHHHHcCCCCCCCCcEEEECccc-cccCC----------------
Confidence 4688889999999999999999 99999999887 4455554321111111122110 01110
Q ss_pred CCccccCCCCCCCCCCCCCcEEEeCCeeeEcCCCCCcccccccceEEEceeEEEeC
Q psy247 339 GMDVHDCAAIPRTIPVAPGMVFTVEPGVYISKDCKETRPEFRGMGIRIEDDILIDK 394 (413)
Q Consensus 339 g~~~~~~~~~~~~~~L~~GMv~~iEPgi~~~~~~~~~~~~~~~~gvriED~vlVt~ 394 (413)
...+.+|++|.++.++.+....+ +-.-+.-|+++++
T Consensus 65 ---------~~~~~~l~~gd~v~id~g~~~~g-----------y~~d~~RT~~~g~ 100 (208)
T cd01092 65 ---------VPSDRKIEEGDLVLIDFGAIYDG-----------YCSDITRTVAVGE 100 (208)
T ss_pred ---------CCCCcCcCCCCEEEEEeeeeECC-----------EeccceeEEECCC
Confidence 23467899999999998765433 5666778888875
No 62
>cd01066 APP_MetAP A family including aminopeptidase P, aminopeptidase M, and prolidase. Also known as metallopeptidase family M24. This family of enzymes is able to cleave amido-, imido- and amidino-containing bonds. Members exibit relatively narrow substrate specificity compared to other metallo-aminopeptidases, suggesting they play roles in regulation of biological processes rather than general protein degradation.
Probab=93.65 E-value=1.2 Score=40.04 Aligned_cols=44 Identities=18% Similarity=0.190 Sum_probs=39.8
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCCCHHHHHHHHHHHHHHcCCC
Q psy247 96 EMMRETCRIASEGFKETIGFSKPGRTEHELFTKFDYEVRMRGAQ 139 (413)
Q Consensus 96 ~~~r~A~~i~~~~~~~~~~~~~~G~tE~el~~~~~~~~~~~G~~ 139 (413)
+.++++.+.+.+++..+++.++||++-.|+...+...+.+.|..
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~i~pG~~~~ei~~~~~~~~~~~g~~ 145 (207)
T cd01066 102 DEQRELYEAVREAQEAALAALRPGVTAEEVDAAAREVLEEHGLG 145 (207)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCcc
Confidence 46788899999999999999999999999999999999998863
No 63
>TIGR00501 met_pdase_II methionine aminopeptidase, type II. Methionine aminopeptidase (map) is a cobalt-binding enzyme. Bacterial and organellar examples (type I) differ from eukaroytic and archaeal (type II) examples in lacking a region of approximately 60 amino acids between the 4th and 5th cobalt-binding ligands. The role of this protein in general is to produce the mature amino end of cytosolic proteins by removing the N-terminal methionine. This model describes type II, among which the eukaryotic members typically have an N-terminal extension not present in archaeal members. It can act cotranslationally. The enzyme from rat has been shown to associate with translation initiation factor 2 (IF-2) and may have a role in translational regulation.
Probab=93.45 E-value=0.87 Score=44.62 Aligned_cols=95 Identities=9% Similarity=0.026 Sum_probs=63.9
Q ss_pred HHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHH--HHHHcCcc-cccccccccCC-CCccCCCCCCCCCCCCCCccee
Q psy247 260 DHQKVLYEIVLDTQLKLLKLCEKSDSALNFIYRYA--YVFQIGFK-FCPHHSSHYLG-MDVHDCAAIPRTIPVAPGVVFT 335 (413)
Q Consensus 260 ~~~~~~~~~~~~a~~~~~~~lkp~G~~~~ei~~~~--~~~~~g~~-~~~h~~GHgiG-l~~~E~p~~~~~~~~~~g~~~~ 335 (413)
+..+++-+.+.++.+.+.+.++| |++..||.+.+ .+.+.|.. -||..+. ++ ...|-.|.
T Consensus 6 ~~~r~A~~I~~~~~~~~~~~i~~-G~se~el~~~~e~~~~~~g~~~aFp~~vs--~n~~~~H~~p~-------------- 68 (295)
T TIGR00501 6 EKWIEAGKIHSKVRREAADRIVP-GVKLLEVAEFVENRIRELGAEPAFPCNIS--INECAAHFTPK-------------- 68 (295)
T ss_pred HHHHHHHHHHHHHHHHHHHHCcC-CCCHHHHHHHHHHHHHHcCCCCCCCccee--cCCEeeCCCCC--------------
Confidence 34577888888889999999999 99999999887 55555542 2222211 11 01121121
Q ss_pred cCCCCccccCCCCCCCCCCCCCcEEEeCCeeeEcCCCCCcccccccceEEEceeEEEeC
Q psy247 336 VEPGMDVHDCAAIPRTIPVAPGMVFTVEPGVYISKDCKETRPEFRGMGIRIEDDILIDK 394 (413)
Q Consensus 336 ~~pg~~~~~~~~~~~~~~L~~GMv~~iEPgi~~~~~~~~~~~~~~~~gvriED~vlVt~ 394 (413)
.+++.+|++|.++.|+.|..+.+ +-.-+.-|+.+++
T Consensus 69 ------------~~d~~~l~~GDvV~iD~G~~~dG-----------Y~aD~arT~~vG~ 104 (295)
T TIGR00501 69 ------------AGDKTVFKDGDVVKLDLGAHVDG-----------YIADTAITVDLGD 104 (295)
T ss_pred ------------CCcCccCCCCCEEEEEEeEEECC-----------EEEEEEEEEEeCc
Confidence 23456899999999999887654 5666777888764
No 64
>PF00557 Peptidase_M24: Metallopeptidase family M24 This Prosite entry corresponds to sub-family M24B This Prosite entry corresponds to sub-families M24A and M24C; InterPro: IPR000994 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This entry contains proteins that belong to MEROPS peptidase family M24 (clan MG), which share a common structural-fold, the "pita-bread" fold. The fold contains both alpha helices and an anti-parallel beta sheet within two structurally similar domains that are thought to be derived from an ancient gene duplication. The active site, where conserved, is located between the two domains. The fold is common to methionine aminopeptidase (3.4.11.18 from EC), aminopeptidase P (3.4.11.9 from EC), prolidase (3.4.13.9 from EC), agropine synthase and creatinase (3.5.3.3 from EC). Though many of these peptidases require a divalent cation, creatinase is not a metal-dependent enzyme [, , ]. The entry also contains proteins that have lost catalytic activity, for example Spt16, which is a component of the FACT complex. The crystal structure of the N-terminal domain of Spt16, determined to 2.1A, reveals an aminopeptidase P fold whose enzymatic activity has been lost. This fold binds directly to histones H3-H4 through a interaction with their globular core domains, as well as with their N-terminal tails []. The FACT complex is a stable heterodimer in Saccharomyces cerevisiae (Baker's yeast) comprising Spt16p (P32558 from SWISSPROT, IPR013953 from INTERPRO) and Pob3p (Q04636 from SWISSPROT, IPR000969 from INTERPRO). The complex plays a role in transcription initiation and promotes binding of TATA-binding protein (TBP) to a TATA box in chromatin []; it also facilitates RNA Polymerase II transcription elongation through nucleosomes by destabilising and then reassembling nucleosome structure [, , ]. ; GO: 0009987 cellular process; PDB: 4A6V_B 4A6W_A 3CTZ_A 3IG4_B 2B3H_A 2NQ6_A 2NQ7_A 2GZ5_A 2G6P_A 2B3L_A ....
Probab=93.10 E-value=0.71 Score=42.19 Aligned_cols=95 Identities=8% Similarity=-0.041 Sum_probs=63.1
Q ss_pred HHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHH--H-HHHcCcccccccccccCCCCccCCCCCCCCCCCCCCcceecC
Q psy247 261 HQKVLYEIVLDTQLKLLKLCEKSDSALNFIYRYA--Y-VFQIGFKFCPHHSSHYLGMDVHDCAAIPRTIPVAPGVVFTVE 337 (413)
Q Consensus 261 ~~~~~~~~~~~a~~~~~~~lkp~G~~~~ei~~~~--~-~~~~g~~~~~h~~GHgiGl~~~E~p~~~~~~~~~~g~~~~~~ 337 (413)
..|++.+.+.++.+++++.++| |++..||...+ . +.+.|.....+..-=..|.... .+..
T Consensus 2 ~~R~a~~i~~~~~~~~~~~~~~-G~te~ei~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~-~~~~--------------- 64 (207)
T PF00557_consen 2 CMRKAARIADAAMEAAMEALRP-GMTEYEIAAAIERAMLRRHGGEEPAFPPIVGSGPNTD-LPHY--------------- 64 (207)
T ss_dssp HHHHHHHHHHHHHHHHHHHHST-TCBHHHHHHHHHHHHHHHTTTTEESSESEEEECCCCG-ETTT---------------
T ss_pred HHHHHHHHHHHHHHHHHHHccC-CCcHHHHHHHHHHHHHHHcCCCcccCCceEecCCcce-ecce---------------
Confidence 5688999999999999999999 99999999988 3 3445532222211111221110 0110
Q ss_pred CCCccccCCCCCCCCCCCCCcEEEeCCeeeEcCCCCCcccccccceEEEceeEEEe
Q psy247 338 PGMDVHDCAAIPRTIPVAPGMVFTVEPGVYISKDCKETRPEFRGMGIRIEDDILID 393 (413)
Q Consensus 338 pg~~~~~~~~~~~~~~L~~GMv~~iEPgi~~~~~~~~~~~~~~~~gvriED~vlVt 393 (413)
.+.+.+|++|+++.++-+..+.+ +-..+.-|+++.
T Consensus 65 ----------~~~~~~l~~gd~v~id~~~~~~g-----------y~~d~~Rt~~~G 99 (207)
T PF00557_consen 65 ----------TPTDRRLQEGDIVIIDFGPRYDG-----------YHADIARTFVVG 99 (207)
T ss_dssp ----------BCCSSBESTTEEEEEEEEEEETT-----------EEEEEEEEEESS
T ss_pred ----------eccceeeecCCcceeeccceeee-----------eEeeeeeEEEEe
Confidence 22477899999999997776543 667778888764
No 65
>PRK09795 aminopeptidase; Provisional
Probab=92.91 E-value=0.1 Score=52.61 Aligned_cols=32 Identities=22% Similarity=0.498 Sum_probs=28.5
Q ss_pred CCCCCCHHHHHhhhHHHHHhhcccccCCCcee
Q psy247 178 SKPGRTEHELFTKFDYEVRMRGAQILAYPPVV 209 (413)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 209 (413)
.++|++|.|+.+.+++..+..|+...+|++++
T Consensus 154 i~~G~tE~e~~~~~~~~~~~~G~~~~~f~~iv 185 (361)
T PRK09795 154 IQAGMSEREIAAELEWFMRQQGAEKASFDTIV 185 (361)
T ss_pred ccCCCcHHHHHHHHHHHHHHCCCCcCCCCeEE
Confidence 46889999999999999999999998898775
No 66
>COG0024 Map Methionine aminopeptidase [Translation, ribosomal structure and biogenesis]
Probab=92.45 E-value=1.2 Score=42.53 Aligned_cols=87 Identities=11% Similarity=0.089 Sum_probs=57.4
Q ss_pred HHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHH--HHHHcCc-c--cccccccccCCCCccCCCCCCCCCCCCCCcce
Q psy247 260 DHQKVLYEIVLDTQLKLLKLCEKSDSALNFIYRYA--YVFQIGF-K--FCPHHSSHYLGMDVHDCAAIPRTIPVAPGVVF 334 (413)
Q Consensus 260 ~~~~~~~~~~~~a~~~~~~~lkp~G~~~~ei~~~~--~~~~~g~-~--~~~h~~GHgiGl~~~E~p~~~~~~~~~~g~~~ 334 (413)
+..|++-+.+.++.+.+.+.++| |++..||.+.+ .+.+.|. . ..-+++.-.+.+.+.|.-. .+.
T Consensus 12 ek~r~Ag~i~a~~l~~~~~~v~p-Gvtt~Eld~~~~~~i~~~ga~pa~~gy~g~~~~~ciSvNe~v~--Hgi-------- 80 (255)
T COG0024 12 EKMREAGKIAAKALKEVASLVKP-GVTTLELDEIAEEFIREKGAYPAFLGYKGFPFPTCISVNEVVA--HGI-------- 80 (255)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCC-CCCHHHHHHHHHHHHHHcCceehhccCcCCCcceEeehhheee--ecC--------
Confidence 34577778888888888999999 99999999998 5555443 1 1112222333333333211 000
Q ss_pred ecCCCCccccCCCCCCCCCCCCCcEEEeCCeeeEcC
Q psy247 335 TVEPGMDVHDCAAIPRTIPVAPGMVFTVEPGVYISK 370 (413)
Q Consensus 335 ~~~pg~~~~~~~~~~~~~~L~~GMv~~iEPgi~~~~ 370 (413)
++++.+|++|.++.|.-|+.+.+
T Consensus 81 -------------P~d~~vlk~GDiv~IDvg~~~dG 103 (255)
T COG0024 81 -------------PGDKKVLKEGDIVKIDVGAHIDG 103 (255)
T ss_pred -------------CCCCcccCCCCEEEEEEEEEECC
Confidence 12578999999999999998875
No 67
>PRK08671 methionine aminopeptidase; Provisional
Probab=92.44 E-value=1.6 Score=42.58 Aligned_cols=94 Identities=12% Similarity=0.075 Sum_probs=63.5
Q ss_pred HHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHH--HHHHcCc-ccccccccccCCC-CccCCCCCCCCCCCCCCccee
Q psy247 260 DHQKVLYEIVLDTQLKLLKLCEKSDSALNFIYRYA--YVFQIGF-KFCPHHSSHYLGM-DVHDCAAIPRTIPVAPGVVFT 335 (413)
Q Consensus 260 ~~~~~~~~~~~~a~~~~~~~lkp~G~~~~ei~~~~--~~~~~g~-~~~~h~~GHgiGl-~~~E~p~~~~~~~~~~g~~~~ 335 (413)
+..+++.+.+.++.+.+.+.++| |++..||.+.+ .+.+.|. .-||-.++ +|- ..|-.|.
T Consensus 3 ~~~r~A~~I~~~~~~~~~~~i~p-G~se~ei~~~~~~~i~~~g~~~afp~~vs--~n~~~~H~~p~-------------- 65 (291)
T PRK08671 3 EKYLEAGKIASKVREEAAKLIKP-GAKLLDVAEFVENRIRELGAKPAFPCNIS--INEVAAHYTPS-------------- 65 (291)
T ss_pred HHHHHHHHHHHHHHHHHHHhccC-CCcHHHHHHHHHHHHHHcCCccCCCCEEe--eCCCccCCCCC--------------
Confidence 35678889999999999999999 99999999887 4555553 22222111 111 1121111
Q ss_pred cCCCCccccCCCCCCCCCCCCCcEEEeCCeeeEcCCCCCcccccccceEEEceeEEEe
Q psy247 336 VEPGMDVHDCAAIPRTIPVAPGMVFTVEPGVYISKDCKETRPEFRGMGIRIEDDILID 393 (413)
Q Consensus 336 ~~pg~~~~~~~~~~~~~~L~~GMv~~iEPgi~~~~~~~~~~~~~~~~gvriED~vlVt 393 (413)
.+++.+|++|.++.|+.|..+.+ +-.-+.-|+.++
T Consensus 66 ------------~~d~~~l~~GDvV~iD~G~~~dG-----------Y~aD~arT~~vG 100 (291)
T PRK08671 66 ------------PGDERVFPEGDVVKLDLGAHVDG-----------YIADTAVTVDLG 100 (291)
T ss_pred ------------CCCCcccCCCCEEEEEEeEEECC-----------EEEEEEEEEEeC
Confidence 23457899999999998887654 556667788776
No 68
>TIGR00495 crvDNA_42K 42K curved DNA binding protein. Proteins identified by this model have been identified in a number of species as a nuclear (but not nucleolar) protein with a cell cycle dependence. Various names given to members of this family have included cell cycle protein p38-2G4, DNA-binding protein GBP16, and proliferation-associated protein 1. This protein is closely related to methionine aminopeptidase, a cobolt-binding protein.
Probab=91.96 E-value=2.2 Score=43.60 Aligned_cols=102 Identities=12% Similarity=0.157 Sum_probs=62.5
Q ss_pred HHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHH--HHHHcCc-ccc-----cccccccCCCCccCCCCCCCCCCCCCCc
Q psy247 261 HQKVLYEIVLDTQLKLLKLCEKSDSALNFIYRYA--YVFQIGF-KFC-----PHHSSHYLGMDVHDCAAIPRTIPVAPGV 332 (413)
Q Consensus 261 ~~~~~~~~~~~a~~~~~~~lkp~G~~~~ei~~~~--~~~~~g~-~~~-----~h~~GHgiGl~~~E~p~~~~~~~~~~g~ 332 (413)
..+++-+.+.++.+.+++.++| |++..||.+.+ .+.+.+. .|. .+++++...+.+.+ ....+.
T Consensus 21 ~~r~Aa~Ia~~~l~~~~~~ikp-G~t~~el~~~~~~~i~~~~a~~~~~~~~~~~g~afpt~vSvN~--~v~H~~------ 91 (389)
T TIGR00495 21 KYKMAGEIANNVLKSVVEACSP-GAKVVDICEKGDAFIMEETAKIFKKEKEMEKGIAFPTCISVNN--CVGHFS------ 91 (389)
T ss_pred HHHHHHHHHHHHHHHHHHhCCC-CCCHHHHHHHHHHHHHHhhhhhhcccccccCCCCCCeEEecCC--eeeCCC------
Confidence 3467777788888888999999 99999999876 3333221 111 01111111111100 000000
Q ss_pred ceecCCCCccccCCCCC-CCCCCCCCcEEEeCCeeeEcCCCCCcccccccceEEEceeEEEeCC
Q psy247 333 VFTVEPGMDVHDCAAIP-RTIPVAPGMVFTVEPGVYISKDCKETRPEFRGMGIRIEDDILIDKS 395 (413)
Q Consensus 333 ~~~~~pg~~~~~~~~~~-~~~~L~~GMv~~iEPgi~~~~~~~~~~~~~~~~gvriED~vlVt~~ 395 (413)
| ..+ .+.+|++|.++.|+-|+.+.+ |..-+..||+|++.
T Consensus 92 -----P--------~~~d~~~~Lk~GDvVkIDlG~~idG-----------Y~aD~arTv~vG~~ 131 (389)
T TIGR00495 92 -----P--------LKSDQDYILKEGDVVKIDLGCHIDG-----------FIALVAHTFVVGVA 131 (389)
T ss_pred -----C--------CCCCCCcCcCCCCEEEEEEEEEECC-----------EEEEEEEEEEECCc
Confidence 0 012 247899999999999988765 67788999999753
No 69
>cd01089 PA2G4-like Related to aminopepdidase M, this family contains proliferation-associated protein 2G4. Family members have been implicated in cell cycle control.
Probab=91.57 E-value=2.5 Score=39.58 Aligned_cols=107 Identities=13% Similarity=0.098 Sum_probs=62.1
Q ss_pred HHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHH--HHHHcCcccccc--cccccCCCCccCCCCCCCCCCCCCCcceec
Q psy247 261 HQKVLYEIVLDTQLKLLKLCEKSDSALNFIYRYA--YVFQIGFKFCPH--HSSHYLGMDVHDCAAIPRTIPVAPGVVFTV 336 (413)
Q Consensus 261 ~~~~~~~~~~~a~~~~~~~lkp~G~~~~ei~~~~--~~~~~g~~~~~h--~~GHgiGl~~~E~p~~~~~~~~~~g~~~~~ 336 (413)
..|++.+.+.++.+.+++.++| |++-.|+.+.+ .+.+.....++. ....++... +.+........+.
T Consensus 3 ~~r~A~~I~~~~~~~~~~~i~p-G~te~ei~~~~e~~i~~~~~~~~~~~~~g~~g~~~~----~~v~~n~~~~H~~---- 73 (228)
T cd01089 3 KYKTAGQIANKVLKQVISLCVP-GAKVVDLCEKGDKLILEELGKVYKKEKKLEKGIAFP----TCISVNNCVCHFS---- 73 (228)
T ss_pred HHHHHHHHHHHHHHHHHHhccC-CCcHHHHHHHHHHHHHHhhcccccCcccccCCCCcC----eEeccCceeecCC----
Confidence 5688899999999999999999 99999987654 222211111111 001111100 0000000000000
Q ss_pred CCCCccccCCCCCCCCCCCCCcEEEeCCeeeEcCCCCCcccccccceEEEceeEEEeCC
Q psy247 337 EPGMDVHDCAAIPRTIPVAPGMVFTVEPGVYISKDCKETRPEFRGMGIRIEDDILIDKS 395 (413)
Q Consensus 337 ~pg~~~~~~~~~~~~~~L~~GMv~~iEPgi~~~~~~~~~~~~~~~~gvriED~vlVt~~ 395 (413)
|. + ..++.+|++|.++.|+.|..+.+ |-.-+.-|++|++-
T Consensus 74 -p~----~---~~~~~~l~~Gd~v~iD~g~~~~G-----------Y~sD~tRT~~vG~~ 113 (228)
T cd01089 74 -PL----K---SDATYTLKDGDVVKIDLGCHIDG-----------YIAVVAHTIVVGAE 113 (228)
T ss_pred -CC----C---CCCCcccCCCCEEEEEEEEEECC-----------EEEEEEEEEEeCCc
Confidence 00 0 13577899999999998887654 67778889988753
No 70
>cd01091 CDC68-like Related to aminopeptidase P and aminopeptidase M, a member of this domain family is present in cell division control protein 68, a transcription factor.
Probab=88.65 E-value=4.7 Score=38.32 Aligned_cols=41 Identities=12% Similarity=0.097 Sum_probs=35.3
Q ss_pred HHHHHHHHHHHHHHHHHhccCCCCCHHHHHHHHHHHHHHcC
Q psy247 97 MMRETCRIASEGFKETIGFSKPGRTEHELFTKFDYEVRMRG 137 (413)
Q Consensus 97 ~~r~A~~i~~~~~~~~~~~~~~G~tE~el~~~~~~~~~~~G 137 (413)
..|++.+++.++..++++.++||++-.++...+...+.+.|
T Consensus 120 ~~~~~y~~~~~a~~~~i~~lkpG~~~~dv~~~a~~~i~~~~ 160 (243)
T cd01091 120 EQQKNYNFLLALQEEILKELKPGAKLSDVYQKTLDYIKKKK 160 (243)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHhC
Confidence 45667788888899999999999999999999988888765
No 71
>PTZ00053 methionine aminopeptidase 2; Provisional
Probab=87.50 E-value=5.9 Score=41.35 Aligned_cols=89 Identities=11% Similarity=0.006 Sum_probs=54.4
Q ss_pred HHHHHHHHHHHHHHHHhcccCCCCHHHHHHHH--HHH----HcCcc---cccccccccCCCC---ccCCCCCCCCCCCCC
Q psy247 263 KVLYEIVLDTQLKLLKLCEKSDSALNFIYRYA--YVF----QIGFK---FCPHHSSHYLGMD---VHDCAAIPRTIPVAP 330 (413)
Q Consensus 263 ~~~~~~~~~a~~~~~~~lkp~G~~~~ei~~~~--~~~----~~g~~---~~~h~~GHgiGl~---~~E~p~~~~~~~~~~ 330 (413)
+++.+.+.++.+.+.+.++| |++..||...+ .+. ..|.. -||. +++++ .|-.|.
T Consensus 162 R~AaeIa~~vl~~~~~~Ikp-G~se~EIa~~ie~~ir~~~~~~G~~~g~aFPt----~vS~N~~aaH~tP~--------- 227 (470)
T PTZ00053 162 RRAAEVHRQVRRYAQSVIKP-GVKLIDICERIESKSRELIEADGLKCGWAFPT----GCSLNHCAAHYTPN--------- 227 (470)
T ss_pred HHHHHHHHHHHHHHHHHhhC-CCCHHHHHHHHHHHHHHHHHhcCCcccCCCCc----eeecCccccCCCCC---------
Confidence 45556666667777888999 99999998876 221 22321 1221 12221 111111
Q ss_pred CcceecCCCCccccCCCCCCCCCCCCCcEEEeCCeeeEcCCCCCcccccccceEEEceeEEEe
Q psy247 331 GVVFTVEPGMDVHDCAAIPRTIPVAPGMVFTVEPGVYISKDCKETRPEFRGMGIRIEDDILID 393 (413)
Q Consensus 331 g~~~~~~pg~~~~~~~~~~~~~~L~~GMv~~iEPgi~~~~~~~~~~~~~~~~gvriED~vlVt 393 (413)
.+++.+|++|.++.|+-|+.+.+ +-.-+.-||.+.
T Consensus 228 -----------------~gd~~vLk~GDvVkID~G~~vdG-----------YiaD~ArTv~vg 262 (470)
T PTZ00053 228 -----------------TGDKTVLTYDDVCKLDFGTHVNG-----------RIIDCAFTVAFN 262 (470)
T ss_pred -----------------CCCCcEecCCCeEEEEEeEEECC-----------EEEeEEEEEEeC
Confidence 23467899999999999987654 455566677664
No 72
>TIGR02993 ectoine_eutD ectoine utilization protein EutD. Members of this family are putative peptidases or hydrolases similar to Xaa-Pro aminopeptidase (pfam00557). They belong to ectoine utilization operons, as found in Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. The exact function is unknown.
Probab=81.69 E-value=14 Score=37.67 Aligned_cols=43 Identities=19% Similarity=0.305 Sum_probs=37.7
Q ss_pred HHHHHHHHHHHHHHHHHhccCCCCCHHHHHHHHHHHHHHcCCC
Q psy247 97 MMRETCRIASEGFKETIGFSKPGRTEHELFTKFDYEVRMRGAQ 139 (413)
Q Consensus 97 ~~r~A~~i~~~~~~~~~~~~~~G~tE~el~~~~~~~~~~~G~~ 139 (413)
.++++.+++.++..++++.++||++-.|+...+...+.+.|..
T Consensus 271 ~~~~~~~~~~~a~~~~i~~ikpG~~~~dv~~~~~~~~~~~G~~ 313 (391)
T TIGR02993 271 AFLDAEKAVLEGMEAGLEAAKPGNTCEDIANAFFAVLKKYGIH 313 (391)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCc
Confidence 4667888889999999999999999999999999999888743
No 73
>PRK14576 putative endopeptidase; Provisional
Probab=77.33 E-value=20 Score=36.62 Aligned_cols=93 Identities=12% Similarity=0.098 Sum_probs=56.5
Q ss_pred HHHHHHHHHHHHHHHHhcccCCCCHHHHHHHH--HHHHcCcccccccccccCCCCccCCCCCCCCCCCCCCcceecCCCC
Q psy247 263 KVLYEIVLDTQLKLLKLCEKSDSALNFIYRYA--YVFQIGFKFCPHHSSHYLGMDVHDCAAIPRTIPVAPGVVFTVEPGM 340 (413)
Q Consensus 263 ~~~~~~~~~a~~~~~~~lkp~G~~~~ei~~~~--~~~~~g~~~~~h~~GHgiGl~~~E~p~~~~~~~~~~g~~~~~~pg~ 340 (413)
+++.+.+.++..++++.+|| |++-.||...+ .+.+.|...++.. ..++...+-.|.
T Consensus 187 r~A~~i~~~~~~~~~~~i~p-G~tE~elaa~~~~~~~~~g~~~~~~~--~~v~~G~~~~~h------------------- 244 (405)
T PRK14576 187 RKSAEITEYGIASAAKKIRV-GCTAAELTAAFKAAVMSFPETNFSRF--NLISVGDNFSPK------------------- 244 (405)
T ss_pred HHHHHHHHHHHHHHHHhccC-CCCHHHHHHHHHHHHHHcCCCcCCCC--CEEEECCcccCC-------------------
Confidence 56667777778888889999 99999998887 3334442111110 011110000011
Q ss_pred ccccCCCCCCCCCCCCCcEEEeCCeeeEcCCCCCcccccccceEEEceeEEEeC
Q psy247 341 DVHDCAAIPRTIPVAPGMVFTVEPGVYISKDCKETRPEFRGMGIRIEDDILIDK 394 (413)
Q Consensus 341 ~~~~~~~~~~~~~L~~GMv~~iEPgi~~~~~~~~~~~~~~~~gvriED~vlVt~ 394 (413)
..+.+..+++|.++.++.+.... |+..-+.-|+++++
T Consensus 245 ------~~~~~~~l~~Gd~v~~d~g~~~~-----------GY~sd~tRT~~~G~ 281 (405)
T PRK14576 245 ------IIADTTPAKVGDLIKFDCGIDVA-----------GYGADLARTFVLGE 281 (405)
T ss_pred ------CCCCCcccCCCCEEEEEeceeEC-----------CEEeeeeEEEECCC
Confidence 02356789999999999776443 35666777887754
No 74
>KOG2775|consensus
Probab=72.03 E-value=19 Score=35.16 Aligned_cols=87 Identities=13% Similarity=0.119 Sum_probs=54.5
Q ss_pred CHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHH------HHHHcCcccccccccccCCCCccCCCCCCCCCCCCCCc
Q psy247 259 TDHQKVLYEIVLDTQLKLLKLCEKSDSALNFIYRYA------YVFQIGFKFCPHHSSHYLGMDVHDCAAIPRTIPVAPGV 332 (413)
Q Consensus 259 ~~~~~~~~~~~~~a~~~~~~~lkp~G~~~~ei~~~~------~~~~~g~~~~~h~~GHgiGl~~~E~p~~~~~~~~~~g~ 332 (413)
-.+.+++.++=+++.+.+.+.+|| |+++-||.+.+ .+.+.|. ..++|.-.|+...-...
T Consensus 85 ~~d~rraAE~HRqvR~yv~s~ikP-Gmtm~ei~e~iEnttR~li~e~gl---~aGi~FPtG~SlN~cAA----------- 149 (397)
T KOG2775|consen 85 YQDLRRAAEAHRQVRKYVQSIIKP-GMTMIEICETIENTTRKLILENGL---NAGIGFPTGCSLNHCAA----------- 149 (397)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccC-cccHHHHHHHHHHHHHHHHHhccc---cccccCCCcccccchhh-----------
Confidence 345566667777777888899999 99999999987 2334443 23344444443211110
Q ss_pred ceecCCCCccccCCCCCCCCCCCCCcEEEeCCeeeEcC
Q psy247 333 VFTVEPGMDVHDCAAIPRTIPVAPGMVFTVEPGVYISK 370 (413)
Q Consensus 333 ~~~~~pg~~~~~~~~~~~~~~L~~GMv~~iEPgi~~~~ 370 (413)
.||.- .++..+|+...|.-|.-|.-+.+
T Consensus 150 HyTpN----------aGd~tVLqydDV~KiDfGthi~G 177 (397)
T KOG2775|consen 150 HYTPN----------AGDKTVLKYDDVMKIDFGTHIDG 177 (397)
T ss_pred hcCCC----------CCCceeeeecceEEEeccccccC
Confidence 11111 34568999999999987776554
No 75
>KOG2776|consensus
Probab=62.42 E-value=49 Score=33.22 Aligned_cols=109 Identities=17% Similarity=0.255 Sum_probs=65.6
Q ss_pred HHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHH--HH-HHcC--c---ccccccccccCCCCccCCCCCCCCCCCCCCcc
Q psy247 262 QKVLYEIVLDTQLKLLKLCEKSDSALNFIYRYA--YV-FQIG--F---KFCPHHSSHYLGMDVHDCAAIPRTIPVAPGVV 333 (413)
Q Consensus 262 ~~~~~~~~~~a~~~~~~~lkp~G~~~~ei~~~~--~~-~~~g--~---~~~~h~~GHgiGl~~~E~p~~~~~~~~~~g~~ 333 (413)
.+.+-+.+..+.+.++++++| |++..||.... .+ .+.| | +-+-.++..-.-+.+...-. .|.
T Consensus 24 Yk~AgeI~n~~lk~V~~~~~~-gasv~eiC~~GD~~i~E~t~kiYK~eK~~~KGIAfPT~Isvnncv~--h~s------- 93 (398)
T KOG2776|consen 24 YKMAGEIVNKVLKSVVELCQP-GASVREICEKGDSLILEETGKIYKKEKDFEKGIAFPTSISVNNCVC--HFS------- 93 (398)
T ss_pred hhhHHHHHHHHHHHHHHHhcC-CchHHHHHHhhhHHHHHHHHHHHhhhhhhhccccccceecccceee--ccC-------
Confidence 356667788888889999999 99999987765 11 1111 1 01111111111111111000 011
Q ss_pred eecCCCCccccCCCCCCCCCCCCCcEEEeCCeeeEcCCCCCcccccccceEEEceeEEEeCCCCcccCCC
Q psy247 334 FTVEPGMDVHDCAAIPRTIPVAPGMVFTVEPGVYISKDCKETRPEFRGMGIRIEDDILIDKSSNVENLSA 403 (413)
Q Consensus 334 ~~~~pg~~~~~~~~~~~~~~L~~GMv~~iEPgi~~~~~~~~~~~~~~~~gvriED~vlVt~~G~~e~Lt~ 403 (413)
|+. .+.+.+|++|.|+-|.-|+-+++ |-.-+..|++|++.-- ..+|.
T Consensus 94 ----Plk-------sd~~~~Lk~GDvVKIdLG~HiDG-----------fiA~vaHT~VV~~~~~-~~vtG 140 (398)
T KOG2776|consen 94 ----PLK-------SDADYTLKEGDVVKIDLGVHIDG-----------FIALVAHTIVVGPAPD-TPVTG 140 (398)
T ss_pred ----cCC-------CCCcccccCCCEEEEEeeeeecc-----------ceeeeeeeEEeccCCC-CcccC
Confidence 110 23489999999999999998876 6777899999987543 34544
No 76
>KOG2413|consensus
Probab=60.59 E-value=7.7 Score=41.15 Aligned_cols=32 Identities=13% Similarity=0.258 Sum_probs=24.8
Q ss_pred cCceEEecCCCCCCEEEEEEcCCCCCceEEEEEeCcc
Q psy247 12 NTDFFYFTGCLEPDSAVVIHGASDENFKSELFVKRKD 48 (413)
Q Consensus 12 ~~n~~YltG~~~~~~~lv~~~~~~~~~~~~l~v~~~~ 48 (413)
+.-..|++||..+.++.+++.. ++.|+++.+.
T Consensus 44 D~R~~flsGFsGsag~Avit~~-----~a~lwtD~RY 75 (606)
T KOG2413|consen 44 DERRAFLSGFSGSAGTAVITEE-----EAALWTDGRY 75 (606)
T ss_pred hhhhhhhcccCCCcceEEEecC-----cceEEEccHH
Confidence 3445789999998888888854 5788888765
No 77
>PF14826 FACT-Spt16_Nlob: FACT complex subunit SPT16 N-terminal lobe domain; PDB: 3BIQ_A 3BIT_A 3BIP_A 3CB6_A 3CB5_A.
Probab=59.74 E-value=6.1 Score=35.23 Aligned_cols=28 Identities=21% Similarity=0.357 Sum_probs=20.2
Q ss_pred eEEecCCCCCCEEEEEEcCCCCCceEEEEEeCc
Q psy247 15 FFYFTGCLEPDSAVVIHGASDENFKSELFVKRK 47 (413)
Q Consensus 15 ~~YltG~~~~~~~lv~~~~~~~~~~~~l~v~~~ 47 (413)
..||+||++|+++++++.+ +.+++.+++
T Consensus 51 q~WLlGYEfpdTiiv~tk~-----~i~~ltS~K 78 (163)
T PF14826_consen 51 QTWLLGYEFPDTIIVFTKK-----KIHFLTSKK 78 (163)
T ss_dssp HHHHHSS--SSEEEEEETT-----EEEEEEEHH
T ss_pred HHHHhcccHhhhhhhhcCC-----EEEEEeCHH
Confidence 4699999999999999975 466666554
No 78
>COG2016 Predicted RNA-binding protein (contains PUA domain) [Translation, ribosomal structure and biogenesis]
Probab=25.34 E-value=41 Score=29.88 Aligned_cols=38 Identities=18% Similarity=0.408 Sum_probs=25.1
Q ss_pred ceecccccCCCCCCHHHHHhhhHHHHHhhcccccCCCceeccCCCccccccccCCccccCCCEEEE
Q psy247 170 LLLMDAGFSKPGRTEHELFTKFDYEVRMRGAQILAYPPVVASGDNANVIHYVHNNQKCCHGDLLLM 235 (413)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g~~~~~~h~~~~~~~i~~Gd~v~i 235 (413)
.+++|+|+.+.-++-+|+.+ |.++.++. -|++||+|.+
T Consensus 78 ~V~VD~GAvk~v~nGADvM~----------------PGIv~~~~------------~ik~Gd~VvV 115 (161)
T COG2016 78 VVVVDEGAVKFVLNGADVMA----------------PGIVSADG------------EIKEGDIVVV 115 (161)
T ss_pred EEEEcCccHhhhcCCCceec----------------cceeecCC------------CccCCCEEEE
Confidence 67888888877666555532 44444433 3889999886
No 79
>TIGR02531 yecD_yerC TrpR-related protein YerC/YecD. This model represents a protein subfamily found mostly in the Firmicutes (Bacillus and allies). This family is similar in sequence to the trp operon repressor TrpR described by TIGR01321, and represents a distinct clade within the broader family described by pfam01371. At least one species, Xylella fastidiosa, in the Proteobacteria, has a member of both this family and TIGR01321. Several genomes with a member of this family do not synthesize tryptophan, and members of this family should not be considered trp operon repressors without new evidence.
Probab=23.32 E-value=2.7e+02 Score=22.03 Aligned_cols=47 Identities=19% Similarity=0.225 Sum_probs=26.4
Q ss_pred HHHHHHHccCCHHHHHHH-------HHHHHHHHHHHHHHHhccCCCCCHHHHHHHH
Q psy247 81 QLFHQLRLYKSDSEQEMM-------RETCRIASEGFKETIGFSKPGRTEHELFTKF 129 (413)
Q Consensus 81 ~~l~~~R~vKs~~Ei~~~-------r~A~~i~~~~~~~~~~~~~~G~tE~el~~~~ 129 (413)
.+++.+-..|+++|+..+ .+-..++.. ..+...+..|+|..+|+..+
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~l~t~~e~~~Ls~R--~~I~~ll~~G~S~~eIA~~L 60 (88)
T TIGR02531 7 ELFDAILTLKNREECYRFFDDIATINEIQSLAQR--LQVAKMLKQGKTYSDIEAET 60 (88)
T ss_pred HHHHHHHhCCCHHHHHHHHHHhCCHHHHHhhhHH--HHHHHHHHCCCCHHHHHHHH
Confidence 344555556666665433 111123444 55556677889998887654
Done!