Query psy247
Match_columns 413
No_of_seqs 227 out of 2037
Neff 7.6
Searched_HMMs 29240
Date Fri Aug 16 17:05:02 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy247.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/247hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ig4_A XAA-Pro aminopeptidase; 100.0 1.7E-67 5.7E-72 536.6 26.6 312 1-413 33-409 (427)
2 2v3z_A XAA-Pro aminopeptidase; 100.0 5.5E-64 1.9E-68 514.1 27.9 323 2-413 36-431 (440)
3 2iw2_A XAA-Pro dipeptidase; me 100.0 5.4E-62 1.9E-66 505.7 27.1 333 2-413 59-477 (494)
4 3rva_A Organophosphorus acid a 100.0 4E-62 1.4E-66 499.9 23.2 326 1-410 42-445 (451)
5 3l24_A XAA-Pro dipeptidase; PI 100.0 2.8E-61 9.7E-66 498.5 22.2 325 2-408 43-440 (517)
6 4fkc_A XAA-Pro aminopeptidase; 100.0 4.4E-59 1.5E-63 468.8 25.3 302 7-412 34-377 (377)
7 3q6d_A Proline dipeptidase; st 100.0 1.8E-57 6.2E-62 453.7 27.4 300 7-412 22-356 (356)
8 1wn1_A Dipeptidase; prolidase, 100.0 4.1E-57 1.4E-61 451.3 27.8 304 4-412 14-356 (356)
9 4ege_A Dipeptidase PEPE; struc 100.0 8.1E-57 2.8E-61 452.4 28.3 302 7-413 34-377 (378)
10 2zsg_A Aminopeptidase P, putat 100.0 1.5E-56 5E-61 447.3 29.2 301 7-412 19-359 (359)
11 1wy2_A XAA-Pro dipeptidase; st 100.0 1.6E-55 5.6E-60 438.9 26.1 297 7-409 23-350 (351)
12 3tb5_A Methionine aminopeptida 100.0 1.8E-55 6.3E-60 421.9 23.6 247 86-413 1-256 (264)
13 3cb6_A FACT complex subunit SP 100.0 2E-54 6.8E-59 443.8 22.8 321 6-413 50-438 (444)
14 3mx6_A Methionine aminopeptida 100.0 1E-52 3.6E-57 402.5 24.5 245 85-410 4-258 (262)
15 3biq_A FACT complex subunit SP 100.0 1.1E-52 3.6E-57 433.6 20.2 323 5-413 45-446 (467)
16 4fuk_A Methionine aminopeptida 100.0 2.6E-52 8.9E-57 413.3 18.1 245 83-408 57-310 (337)
17 1kp0_A Creatine amidinohydrola 100.0 2.3E-51 7.8E-56 415.8 24.3 315 7-411 43-397 (402)
18 3tav_A Methionine aminopeptida 100.0 1.1E-51 3.8E-56 400.1 20.8 249 77-406 20-286 (286)
19 2gg2_A Methionine aminopeptida 100.0 7E-51 2.4E-55 389.9 23.2 244 86-410 1-255 (263)
20 3pka_A Methionine aminopeptida 100.0 1.1E-50 3.8E-55 392.9 23.9 239 85-403 37-284 (285)
21 1o0x_A Methionine aminopeptida 100.0 1.5E-50 5.3E-55 387.4 23.2 240 84-403 11-260 (262)
22 3s6b_A Methionine aminopeptida 100.0 2.4E-50 8.1E-55 400.5 23.8 248 85-412 99-358 (368)
23 4b28_A Metallopeptidase, famil 100.0 3.8E-51 1.3E-55 420.7 18.0 244 73-412 213-467 (470)
24 1chm_A Creatine amidinohydrola 100.0 4E-50 1.4E-54 406.8 25.1 313 7-411 42-397 (401)
25 2b3h_A Methionine aminopeptida 100.0 1E-49 3.5E-54 392.6 23.3 245 85-409 71-325 (329)
26 1qxy_A Methionyl aminopeptidas 100.0 7.1E-49 2.4E-53 373.5 22.5 238 89-408 3-251 (252)
27 3ctz_A XAA-Pro aminopeptidase 100.0 2.6E-47 9E-52 405.1 19.8 241 75-413 307-573 (623)
28 2q8k_A Proliferation-associate 100.0 1.8E-41 6.1E-46 342.3 19.8 258 81-412 11-350 (401)
29 1xgs_A Methionine aminopeptida 100.0 3.8E-40 1.3E-44 320.2 19.6 185 93-367 1-191 (295)
30 1b6a_A Methionine aminopeptida 100.0 4.7E-38 1.6E-42 321.1 18.9 196 85-369 154-370 (478)
31 2nw5_A Methionine aminopeptida 100.0 4.8E-36 1.6E-40 297.9 17.0 195 90-371 42-252 (360)
32 3fm3_A Methionine aminopeptida 100.0 1.5E-34 5E-39 287.9 18.9 200 84-369 34-249 (358)
33 4b6a_t Probable metalloproteas 99.5 2.2E-13 7.4E-18 140.6 16.1 177 86-319 37-275 (614)
34 4fuk_A Methionine aminopeptida 98.9 1E-11 3.5E-16 122.3 -10.3 187 134-378 113-306 (337)
35 3tb5_A Methionine aminopeptida 98.6 7.5E-10 2.6E-14 105.1 -6.6 177 141-375 61-244 (264)
36 3l24_A XAA-Pro dipeptidase; PI 98.4 2.7E-08 9.4E-13 102.8 -1.6 50 143-193 212-262 (517)
37 1chm_A Creatine amidinohydrola 98.3 6.1E-08 2.1E-12 97.4 -1.8 51 141-192 213-265 (401)
38 3tav_A Methionine aminopeptida 98.2 4E-08 1.4E-12 94.3 -5.1 52 141-193 91-143 (286)
39 1qxy_A Methionyl aminopeptidas 98.1 3.6E-08 1.2E-12 92.7 -6.1 51 142-193 61-111 (252)
40 4fkc_A XAA-Pro aminopeptidase; 98.1 3E-07 1E-11 91.5 -0.6 46 145-191 207-252 (377)
41 1kp0_A Creatine amidinohydrola 98.0 9.9E-07 3.4E-11 88.4 0.6 50 142-192 216-265 (402)
42 2b3h_A Methionine aminopeptida 98.0 9.6E-08 3.3E-12 93.5 -6.8 51 141-192 132-182 (329)
43 3pka_A Methionine aminopeptida 97.9 2E-07 6.8E-12 89.5 -5.9 51 141-192 98-148 (285)
44 3s6b_A Methionine aminopeptida 97.9 2.8E-07 9.6E-12 91.3 -5.2 51 140-191 159-209 (368)
45 1o0x_A Methionine aminopeptida 97.8 4.8E-07 1.6E-11 85.6 -4.5 52 141-193 73-125 (262)
46 3cb6_A FACT complex subunit SP 97.8 1.3E-06 4.3E-11 88.8 -1.7 52 140-193 250-302 (444)
47 2gg2_A Methionine aminopeptida 97.8 6.5E-07 2.2E-11 84.7 -4.4 51 141-192 62-113 (263)
48 4b28_A Metallopeptidase, famil 97.5 1.6E-06 5.6E-11 88.8 -7.6 42 149-191 293-335 (470)
49 3il0_A Aminopeptidase P; XAA-P 97.2 0.00012 4E-09 61.1 2.1 79 7-90 23-131 (131)
50 3pn9_A Proline dipeptidase; st 97.1 0.00028 9.7E-09 59.2 3.4 80 7-90 22-138 (138)
51 3i7m_A XAA-Pro dipeptidase; st 96.8 0.00031 1.1E-08 59.3 1.1 78 7-88 21-139 (140)
52 3qoc_A Putative metallopeptida 96.2 0.0004 1.4E-08 58.6 -1.7 39 7-49 29-67 (135)
53 3o5v_A X-Pro dipeptidase; crea 96.0 0.0022 7.4E-08 53.5 1.7 40 7-50 20-63 (132)
54 3ooo_A Proline dipeptidase; st 95.9 0.0022 7.7E-08 53.4 1.4 40 7-50 20-63 (132)
55 3biq_A FACT complex subunit SP 95.8 0.038 1.3E-06 56.0 10.5 114 140-254 256-424 (467)
56 3ctz_A XAA-Pro aminopeptidase 95.6 0.0015 5.1E-08 69.1 -1.3 49 144-193 382-433 (623)
57 3mx6_A Methionine aminopeptida 95.4 0.0013 4.3E-08 61.8 -2.1 51 141-192 65-115 (262)
58 3ig4_A XAA-Pro aminopeptidase; 95.0 0.01 3.4E-07 59.8 2.9 23 178-200 198-220 (427)
59 3fm3_A Methionine aminopeptida 94.3 0.17 5.8E-06 49.6 9.7 97 261-394 47-150 (358)
60 2v3z_A XAA-Pro aminopeptidase; 94.3 0.023 7.9E-07 57.3 3.6 23 178-200 202-224 (440)
61 1wy2_A XAA-Pro dipeptidase; st 94.0 0.029 9.9E-07 54.8 3.5 22 179-200 155-176 (351)
62 2zsg_A Aminopeptidase P, putat 94.0 0.03 1E-06 54.6 3.5 22 179-200 161-182 (359)
63 3q6d_A Proline dipeptidase; st 93.9 0.034 1.2E-06 54.2 3.7 23 178-200 157-179 (356)
64 2iw2_A XAA-Pro dipeptidase; me 92.4 0.072 2.5E-06 54.5 3.6 34 178-211 214-248 (494)
65 1xgs_A Methionine aminopeptida 92.2 0.7 2.4E-05 43.8 10.1 95 260-394 4-102 (295)
66 1wn1_A Dipeptidase; prolidase, 92.0 0.088 3E-06 51.4 3.6 21 178-198 158-178 (356)
67 3ovk_A Aminopeptidase P, XAA-P 92.0 0.042 1.4E-06 45.6 1.0 38 7-49 27-64 (132)
68 3rva_A Organophosphorus acid a 90.7 0.13 4.5E-06 52.0 3.3 20 109-128 149-168 (451)
69 4ege_A Dipeptidase PEPE; struc 88.9 0.17 6E-06 49.8 2.5 24 178-201 177-200 (378)
70 2nw5_A Methionine aminopeptida 87.3 2.7 9.2E-05 41.0 9.9 90 262-393 50-151 (360)
71 2q8k_A Proliferation-associate 80.0 4.3 0.00015 40.1 8.0 99 262-393 28-135 (401)
72 4b6a_t Probable metalloproteas 73.4 6.3 0.00021 40.9 7.1 114 260-396 47-185 (614)
73 1b6a_A Methionine aminopeptida 70.4 9.5 0.00033 38.6 7.6 91 263-393 170-270 (478)
74 3s93_A Tudor domain-containing 22.1 2E+02 0.0068 22.3 6.0 49 261-311 4-52 (102)
75 3kor_A Possible Trp repressor; 20.4 1.6E+02 0.0055 23.7 5.2 50 78-129 29-85 (119)
No 1
>3ig4_A XAA-Pro aminopeptidase; csgid, hydrolase, struct genomics, center for structural genomics of infectious DISE; HET: SO4; 2.89A {Bacillus anthracis}
Probab=100.00 E-value=1.7e-67 Score=536.63 Aligned_cols=312 Identities=31% Similarity=0.557 Sum_probs=272.6
Q ss_pred CCCCcceeeeecCceEEecCCCCCCEEEEEEcCCCCCceEEEEEeCcchhhhccCCCcccHh---------------hHh
Q psy247 1 MTEKIPYIFRQNTDFFYFTGCLEPDSAVVIHGASDENFKSELFVKRKDAKAELWDGPRTGKA---------------QLN 65 (413)
Q Consensus 1 ~~~~~~~~f~q~~n~~YltG~~~~~~~lv~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~---------------~~~ 65 (413)
+++|++|+|||++||+||||+.+|+++++++... +..+.+||++++++..++|.|+|.+.+ ++.
T Consensus 33 ~~~d~~~~frq~s~f~YltG~~~~~~~~v~~~~~-~~~~~~lfv~~~~~~~~~w~g~r~~~~~a~~~~~~~~v~~~~~~~ 111 (427)
T 3ig4_A 33 MSADAHYKFVPNRNFYYVTGIDEPNVIFMLKKFG-NSVEETLFIEKSDPVMEKWVGKTVSNEEAEKISGIKKVIYLDSFE 111 (427)
T ss_dssp EETTEECCCCCCHHHHHHHCCCSTTCEEEEEEET-TEEEEEEEECCCCTTGGGTTCCCCCHHHHHHHHCCSEEEEGGGHH
T ss_pred cCCCCCCcccCCCCeEEeeCCCCCCEEEEEEccC-CCceEEEEecCCCccceEEeCCCCcHHHHHhcCCCCEEEEhhhHH
Confidence 3579999999999999999999999999997532 224789999999999999999987766 122
Q ss_pred ----hhcCC--------------------------------CCCCcccchHHHHHHHHccCCHHHHHHHHHHHHHHHHHH
Q psy247 66 ----GYVPR--------------------------------RKDYSWNVPKQLFHQLRLYKSDSEQEMMRETCRIASEGF 109 (413)
Q Consensus 66 ----~~l~~--------------------------------~~~~~~~d~~~~l~~~R~vKs~~Ei~~~r~A~~i~~~~~ 109 (413)
+++.. +|..+++++++++.++|++||++||+.||+|++++++++
T Consensus 112 ~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~i~~lR~iKs~~EI~~mr~A~~i~~~a~ 191 (427)
T 3ig4_A 112 KTMSNIFFTENVKHLYLDLECREWKGTETKTLAFAKHVREQYPHVTIGNVYPNICELRVFKTDEEIEIIKEAIAVTKDGI 191 (427)
T ss_dssp HHHHHHHTTTCCCEEEECCCCCCTTCCCCHHHHHHHHHHHHCTTCEEEECHHHHHHHHTSCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCCcEEEEeCCccccccccccCHHHHHHHHhhCCCCeEeEhHHHHHHHHhcCCHHHHHHHHHHHHHHHHHH
Confidence 22211 134567899999999999999999999999999999999
Q ss_pred HHHHhccCCCCCHHHHHHHHHHHHHHcCCCCCCCCceeecCCCccccccccCCcccccCcceecccccCCCCCCHHHHHh
Q psy247 110 KETIGFSKPGRTEHELFTKFDYEVRMRGAQILAYPPVVASGDNANVIHYVHNNQKCCHGDLLLMDAGFSKPGRTEHELFT 189 (413)
Q Consensus 110 ~~~~~~~~~G~tE~el~~~~~~~~~~~G~~~~~~~~iv~sG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (413)
..+++.++||+||.||++.+++.++++|++..+
T Consensus 192 ~~~~~~i~pG~tE~el~~~~~~~~~~~G~~~~~----------------------------------------------- 224 (427)
T 3ig4_A 192 YNVLKHAKADMMEYELEAQFDFTLKSSGIKHHA----------------------------------------------- 224 (427)
T ss_dssp HHHHHHCCSSEEHHHHHHHHHHHHHHTTCCEES-----------------------------------------------
T ss_pred HHHHHHccCCCCHHHHHHHHHHHHHHcCCCCCC-----------------------------------------------
Confidence 999999999999999999999999999876544
Q ss_pred hhHHHHHhhcccccCCCceeccCCCccccccccCCccccCCCEEEEecceeeCcEEeceEEEEeecCCCCHHHHHHHHHH
Q psy247 190 KFDYEVRMRGAQILAYPPVVASGDNANVIHYVHNNQKCCHGDLLLMDAGCELNGYDSDITRTWPISGQFTDHQKVLYEIV 269 (413)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~v~~g~~~~~~h~~~~~~~i~~Gd~v~iD~g~~~~GY~aDitRT~~v~G~~~~~~~~~~~~~ 269 (413)
|++++++|.|++++||.|++++|++||+|++|+|++|+||++|+||||+++|+|+++|+++|+++
T Consensus 225 ---------------f~~ivasG~n~~~~H~~~~~~~l~~GdlvliD~G~~~~gY~sDitRT~~v~G~~s~~~~~~y~~v 289 (427)
T 3ig4_A 225 ---------------FNTILASGKNATVLHYEDNDAQIQNGDLVLLDLGAQKDYYNADISYTFPANGTFSSRQKQIYNIV 289 (427)
T ss_dssp ---------------SCCEEEEGGGGGSTTCCCCCSEECTTCEEEEEECEEETTEECCEEEEEETTSCCCHHHHHHHHHH
T ss_pred ---------------CCCEEEECccccccccCcccccCCCCCEEEEEeeeEECcEEEEEEEEEecCCCCCHHHHHHHHHH
Confidence 45556666667778888889999999999999999999999999999999899999999999999
Q ss_pred HHHHHHHHHhcccCCCCHHHHHHHH--HHHHc-----------Cc-ccccccccccCCCCccCCCCCCCCCCCCCCccee
Q psy247 270 LDTQLKLLKLCEKSDSALNFIYRYA--YVFQI-----------GF-KFCPHHSSHYLGMDVHDCAAIPRTIPVAPGVVFT 335 (413)
Q Consensus 270 ~~a~~~~~~~lkp~G~~~~ei~~~~--~~~~~-----------g~-~~~~h~~GHgiGl~~~E~p~~~~~~~~~~g~~~~ 335 (413)
+++|+++++++|| |+++.||++++ .+.+. ++ .+++|++||++|+++||.|.
T Consensus 290 l~a~~~~i~~~kp-G~~~~di~~~a~~~i~~~~~~~G~~~~~~~~~~~~~Hg~GH~iGl~vhe~~~-------------- 354 (427)
T 3ig4_A 290 LNALKETTEIIKP-GLKFAALNEHAKKVLAEGCKAVGLIQEDEELSKYYYHGVSHFLGLDTHDVGT-------------- 354 (427)
T ss_dssp HHHHHHHHHTCCT-TCBTHHHHHHHHHHHHHHHHHHTSCSSGGGGGGTCCSCSCCBCSSSSSCCCC--------------
T ss_pred HHHHHHHHHHccC-CCcHHHHHHHHHHHHHHhHhhcCCccCcchhhccCCCCCCCcCCcCCCcCCC--------------
Confidence 9999999999999 99999999998 33332 33 57899999999999999764
Q ss_pred cCCCCccccCCCCCCCCCCCCCcEEEeCCeeeEcCCCCCcccccccceEEEceeEEEeCCCCcccCCCCCCCCccccC
Q psy247 336 VEPGMDVHDCAAIPRTIPVAPGMVFTVEPGVYISKDCKETRPEFRGMGIRIEDDILIDKSSNVENLSAMCPKNIDEIE 413 (413)
Q Consensus 336 ~~pg~~~~~~~~~~~~~~L~~GMv~~iEPgi~~~~~~~~~~~~~~~~gvriED~vlVt~~G~~e~Lt~~~p~~~~~ie 413 (413)
..+.+|+||||||||||+|+++. |+|+||||+|+||++|+ |+||..+||++++||
T Consensus 355 -------------~~~~~L~~GMV~tiEPgiy~~~~---------g~GvriEd~vlVt~~G~-e~LT~~~pk~~~~IE 409 (427)
T 3ig4_A 355 -------------YKDRVLEEGMVITIEPGLYIEEE---------SIGIRIEDDILVTKDGH-ENLSKDIIREVEEIE 409 (427)
T ss_dssp -------------CTTCBCCTTCEEEECCEEEEGGG---------TEEEECBEEEEECSSSE-EETTTTSCCSHHHHH
T ss_pred -------------CCCCEeCCCCEEEECCEEEECCC---------ceEEEEeeEEEEeCCcC-eECCCCCCCCHHHHH
Confidence 24679999999999999999874 36999999999999999 999987899999987
No 2
>2v3z_A XAA-Pro aminopeptidase; 'PITA-bread' enzyme, proline- specific enzyme, aminopeptidas manganese enzyme, protease, manganese; HET: CSO; 1.56A {Escherichia coli} SCOP: c.55.2.1 d.127.1.1 PDB: 2bwy_A* 1wl9_A 1m35_A 1n51_A* 1w2m_A 1a16_A 1wbq_A 1wl6_A* 1w7v_A 1wlr_A* 2bh3_A* 2bha_A* 2bhb_A* 2bhc_A* 2bhd_A* 2bn7_A* 1jaw_A 2bwt_A* 2bwu_A* 2bww_A* ...
Probab=100.00 E-value=5.5e-64 Score=514.12 Aligned_cols=323 Identities=37% Similarity=0.634 Sum_probs=274.0
Q ss_pred CCCcceeeeecCceEEecCCCCCCEEEEEEcCCCCCceEEEEEeCcchhhhccCCCcccHh---------------hHhh
Q psy247 2 TEKIPYIFRQNTDFFYFTGCLEPDSAVVIHGASDENFKSELFVKRKDAKAELWDGPRTGKA---------------QLNG 66 (413)
Q Consensus 2 ~~~~~~~f~q~~n~~YltG~~~~~~~lv~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~---------------~~~~ 66 (413)
++|++|+|||++||+||||+..|+++|+++.+.....+++||+++.+...+.|.+.+.+.+ ++.+
T Consensus 36 ~~D~~y~frq~~n~~YltG~~~~~~~lvi~~~~~~~~~~~Lf~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~ 115 (440)
T 2v3z_A 36 SADSEYPYRQNSDFWYFTGFNEPEAVLVLIKSDDTHNHSVLFNRVRDLTAEIWFGRRLGQDAAPEKLGVDRALAFSEINQ 115 (440)
T ss_dssp ETTEECCCCCCHHHHHHHCCCCSSCEEEEEECSSSCEEEEEEECCCCHHHHHHHCCCCHHHHHHHHHTCSEEEEGGGHHH
T ss_pred CCCCCCcccCCCCEEEecCCCCCCEEEEEEecCCCCceEEEEecCCCcccceecCCCCCHHHHHHhcCCCEEeeHHHHHH
Confidence 5799999999999999999999998888875311123789999999888888877654432 2211
Q ss_pred hcC----C---------------------------------CCCCcccchHHHHHHHHccCCHHHHHHHHHHHHHHHHHH
Q psy247 67 YVP----R---------------------------------RKDYSWNVPKQLFHQLRLYKSDSEQEMMRETCRIASEGF 109 (413)
Q Consensus 67 ~l~----~---------------------------------~~~~~~~d~~~~l~~~R~vKs~~Ei~~~r~A~~i~~~~~ 109 (413)
.|+ . ++..++++++.++..+|++||++||+.||+|++++++++
T Consensus 116 ~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~R~iKs~~Ei~~~r~A~~i~~~a~ 195 (440)
T 2v3z_A 116 QLYQLLNGLDVVYHAQGEYAYADVIVNSALEKLRKGSRQNLTAPATMIDWRPVVHEMRLFKSPEEIAVLRRAGEITAMAH 195 (440)
T ss_dssp HHHHHHTTCSEEECCTTSCHHHHHHHHHHHHHHHTCGGGTCCCCSEEECCHHHHHHHHHSCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHcCCCEEEEeCCcccchhHHHHHHHHHHhhhcccccCCcceeeeHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHH
Confidence 111 0 123467889999999999999999999999999999999
Q ss_pred HHHHhccCCCCCHHHHHHHHHHHHHHcCCCCCCCCceeecCCCccccccccCCcccccCcceecccccCCCCCCHHHHHh
Q psy247 110 KETIGFSKPGRTEHELFTKFDYEVRMRGAQILAYPPVVASGDNANVIHYVHNNQKCCHGDLLLMDAGFSKPGRTEHELFT 189 (413)
Q Consensus 110 ~~~~~~~~~G~tE~el~~~~~~~~~~~G~~~~~~~~iv~sG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (413)
..+++.++||+||.||++.+++.++++|+...+
T Consensus 196 ~~~~~~i~~G~tE~el~~~~~~~~~~~G~~~~~----------------------------------------------- 228 (440)
T 2v3z_A 196 TRAMEKCRPGMFEYHLEGEIHHEFNRHGARYPS----------------------------------------------- 228 (440)
T ss_dssp HHHHHHCCTTCBHHHHHHHHHHHHHHTTCCEES-----------------------------------------------
T ss_pred HHHHHhccCCCcHHHHHHHHHHHHHHcCCCcCC-----------------------------------------------
Confidence 999999999999999999999999998876544
Q ss_pred hhHHHHHhhcccccCCCceeccCCCccccccccCCccccCCCEEEEecceeeCcEEeceEEEEeecCCCCHHHHHHHHHH
Q psy247 190 KFDYEVRMRGAQILAYPPVVASGDNANVIHYVHNNQKCCHGDLLLMDAGCELNGYDSDITRTWPISGQFTDHQKVLYEIV 269 (413)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~v~~g~~~~~~h~~~~~~~i~~Gd~v~iD~g~~~~GY~aDitRT~~v~G~~~~~~~~~~~~~ 269 (413)
|++++++|.|++++|+.|++++|++||+|++|+|++|+||++|+|||++++|+++++|+++|+.+
T Consensus 229 ---------------f~~iv~~G~n~~~~H~~~~~~~l~~gd~vliD~G~~~~gy~sD~tRT~~v~G~~~~~~~~~y~~v 293 (440)
T 2v3z_A 229 ---------------YNTIVGSGENGCILHYTENECEMRDGDLVLIDAGCEYKGYAGDITRTFPVNGKFTQAQREIYDIV 293 (440)
T ss_dssp ---------------SCCEEEEGGGGGSTTCCCCCSBCCTTCEEEEEECEEETTEECCEEEEEETTSCCCHHHHHHHHHH
T ss_pred ---------------CCCeEEEcCccccccCCCCCccccCCCEEEEEeeEEECCEEEeeEEEEEeCCCCCHHHHHHHHHH
Confidence 45555666666777888888999999999999999999999999999999889999999999999
Q ss_pred HHHHHHHHHhcccCCCCHHHHHHHH--HHH----Hc--------------Cc-ccccccccccCCCCccCCCCCCCCCCC
Q psy247 270 LDTQLKLLKLCEKSDSALNFIYRYA--YVF----QI--------------GF-KFCPHHSSHYLGMDVHDCAAIPRTIPV 328 (413)
Q Consensus 270 ~~a~~~~~~~lkp~G~~~~ei~~~~--~~~----~~--------------g~-~~~~h~~GHgiGl~~~E~p~~~~~~~~ 328 (413)
++++.++++++|| |++++||++++ .+. +. ++ .+++|++||+||+++||.|.+.
T Consensus 294 ~~a~~~~i~~~~p-G~~~~~v~~~~~~~~~~~l~~~G~~~g~~~~~~~~~~~~~~~~Hg~GHgiGl~~he~p~~~----- 367 (440)
T 2v3z_A 294 LESLETSLRLYRP-GTSILEVTGEVVRIMVSGLVKLGILKGDVDELIAQNAHRPFFMHGLSHWLGLDVHDVGVYG----- 367 (440)
T ss_dssp HHHHHHHHHHCCT-TCCHHHHHHHHHHHHHHHHHHHTSSCSCHHHHHHTTTTTTTCCSCSCCBCSSSSSCCSCCC-----
T ss_pred HHHHHHHHHHhcC-CCcHHHHHHHHHHHHHhhhhccCcccCchhhhhhhhccccccCCCCCCcCCcccccCCCcC-----
Confidence 9999999999999 99999999998 322 22 34 5789999999999999999753
Q ss_pred CCCcceecCCCCccccCCCCCCCCCCCCCcEEEeCCeeeEcCCCCCcccccccceEEEceeEEEeCCCCcccCCCCCCCC
Q psy247 329 APGVVFTVEPGMDVHDCAAIPRTIPVAPGMVFTVEPGVYISKDCKETRPEFRGMGIRIEDDILIDKSSNVENLSAMCPKN 408 (413)
Q Consensus 329 ~~g~~~~~~pg~~~~~~~~~~~~~~L~~GMv~~iEPgi~~~~~~~~~~~~~~~~gvriED~vlVt~~G~~e~Lt~~~p~~ 408 (413)
.+.+.+|+||||||||||+|+++.. .++++|+++|+||||+|+||++|+ |+||..+|++
T Consensus 368 -------------------~~~~~~L~~Gmv~tiEPgiy~~~~~-~~~~~~~~~GvriEd~vlVt~~G~-e~LT~~~p~~ 426 (440)
T 2v3z_A 368 -------------------QDRSRILEPGMVLTVAPGLYIAPDA-EVPEQYRGIGIRIEDDIVITETGN-ENLTASVVKK 426 (440)
T ss_dssp -------------------GGGCCCCCTTCEEEECCEEEECTTC-SSCGGGTTEEEECBEEEEEETTEE-EESSTTSCCS
T ss_pred -------------------CCCCCccCCCCEEEECCEEEeCCcc-ccccccceeEEEEeeEEEECCCcC-eECCcccCCC
Confidence 1246899999999999999999864 367888889999999999999998 9999547999
Q ss_pred ccccC
Q psy247 409 IDEIE 413 (413)
Q Consensus 409 ~~~ie 413 (413)
+.+||
T Consensus 427 ~~~Ie 431 (440)
T 2v3z_A 427 PEEIE 431 (440)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 98875
No 3
>2iw2_A XAA-Pro dipeptidase; metallocarboxypeptidase, disease mutation, XAA-Pro dipeptida dipeptidase, peptidase D, collagen degradation; 1.82A {Homo sapiens} PDB: 2okn_A
Probab=100.00 E-value=5.4e-62 Score=505.69 Aligned_cols=333 Identities=33% Similarity=0.531 Sum_probs=267.1
Q ss_pred CCCcceeeeecCceEEecCCCCCCEEEEEEcCCCCCceEEEEEeCcchhhhccCCCcccHhh---------------Hhh
Q psy247 2 TEKIPYIFRQNTDFFYFTGCLEPDSAVVIHGASDENFKSELFVKRKDAKAELWDGPRTGKAQ---------------LNG 66 (413)
Q Consensus 2 ~~~~~~~f~q~~n~~YltG~~~~~~~lv~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~---------------~~~ 66 (413)
++|++|+|||++||+||||+.+|++++++.... .+++||+++.+...+.|.+.+.++++ +.+
T Consensus 59 ~~d~~y~frq~s~f~YLtG~~~p~~~~vi~~~~---~~~~L~~~~~~~~~~~w~g~~~~~~~~~~~~~~~~~~~~~~l~~ 135 (494)
T 2iw2_A 59 CTDTGVLFRQESFFHWAFGVTEPGCYGVIDVDT---GKSTLFVPRLPASHATWMGKIHSKEHFKEKYAVDDVQYVDEIAS 135 (494)
T ss_dssp TSCCEECCCCCHHHHHHHCCCSSSCEEEEETTT---CCEEEEECCCCGGGTTTTCCCCCHHHHHHHHTCSEEEEGGGHHH
T ss_pred CCCCCCCccCCcceeeecCCCCCCeEEEEEccC---CeEEEEECCCCHHHhhhcCCCCCHHHHHHHhCCcccccHHHHHH
Confidence 479999999999999999999999999886532 27899999999888899987665442 323
Q ss_pred hcCCC------------------------CC-----CcccchHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHhccC
Q psy247 67 YVPRR------------------------KD-----YSWNVPKQLFHQLRLYKSDSEQEMMRETCRIASEGFKETIGFSK 117 (413)
Q Consensus 67 ~l~~~------------------------~~-----~~~~d~~~~l~~~R~vKs~~Ei~~~r~A~~i~~~~~~~~~~~~~ 117 (413)
+|+.+ .. ...+++.+++..+|++||++||+.||+|++++++++.++++.++
T Consensus 136 ~L~~~~~~~i~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~R~iKs~~EI~~mr~A~~i~~~a~~~~~~~i~ 215 (494)
T 2iw2_A 136 VLTSQKPSVLLTLRGVNTDSGSVCREASFDGISKFEVNNTILHPEIVECRVFKTDMELEVLRYTNKISSEAHREVMKAVK 215 (494)
T ss_dssp HHHHTCCSCEECCCCBCTTTCCBCCCCCCTTGGGSCEECSSHHHHHHHHHHSCCHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred HHHhcCCCeEEEecCccccccccccHhhhhhhhhccccchhHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 32211 00 12346788999999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHc-CCCCCCCCceeecCCCccccccccCCcccccCcceecccccCCCCCCHHHHHhhhHHHHH
Q psy247 118 PGRTEHELFTKFDYEVRMR-GAQILAYPPVVASGDNANVIHYVHNNQKCCHGDLLLMDAGFSKPGRTEHELFTKFDYEVR 196 (413)
Q Consensus 118 ~G~tE~el~~~~~~~~~~~-G~~~~~~~~iv~sG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (413)
||+||.||++.+.+.++++ |+...+|++|+++|.|
T Consensus 216 ~G~tE~el~~~~~~~~~~~~G~~~~~~~~iv~sG~n-------------------------------------------- 251 (494)
T 2iw2_A 216 VGMKEYELESLFEHYCYSRGGMRHSSYTCICGSGEN-------------------------------------------- 251 (494)
T ss_dssp TTCBHHHHHHHHHHHHHHHHCCCEESSCCEEEEGGG--------------------------------------------
T ss_pred CCCcHHHHHHHHHHHHHHhCCCCcCCCCceEEEcCc--------------------------------------------
Confidence 9999999999999888876 7765555555555554
Q ss_pred hhcccccCCCceeccCCCccccccc----cCCccccCCCEEEEecceeeCcEEeceEEEEeecCCCCHHHHHHHHHHHHH
Q psy247 197 MRGAQILAYPPVVASGDNANVIHYV----HNNQKCCHGDLLLMDAGCELNGYDSDITRTWPISGQFTDHQKVLYEIVLDT 272 (413)
Q Consensus 197 ~~~~~~~~~~~~v~~g~~~~~~h~~----~~~~~i~~Gd~v~iD~g~~~~GY~aDitRT~~v~G~~~~~~~~~~~~~~~a 272 (413)
++++||. |++++|++||+|++|+|++|+||++|+||||+++|+|+++|+++|++++++
T Consensus 252 ------------------~~~~Hy~~~g~p~~~~l~~Gd~vliD~G~~~~gY~sDitRT~~v~G~~s~~q~~~y~~v~~a 313 (494)
T 2iw2_A 252 ------------------SAVLHYGHAGAPNDRTIQNGDMCLFDMGGEYYCFASDITCSFPANGKFTADQKAVYEAVLRS 313 (494)
T ss_dssp ------------------GGCSSCSSTTSCSCCBCCTTCEEEEEECEEBTTBCCCEEEEEETTSCCCHHHHHHHHHHHHH
T ss_pred ------------------cccccccccCCCCCCccCCCCEEEEEeeEEECCEEEEeeEEEEECCcCCHHHHHHHHHHHHH
Confidence 4555543 458899999999999999999999999999999889999999999999999
Q ss_pred HHHHHHhcccCCCCHHHHHHHH--HH----HHcCc---------------ccccccccccCCCCccCCCCCCCCCCCCCC
Q psy247 273 QLKLLKLCEKSDSALNFIYRYA--YV----FQIGF---------------KFCPHHSSHYLGMDVHDCAAIPRTIPVAPG 331 (413)
Q Consensus 273 ~~~~~~~lkp~G~~~~ei~~~~--~~----~~~g~---------------~~~~h~~GHgiGl~~~E~p~~~~~~~~~~g 331 (413)
|+++++++|| |+++.||++++ .+ .+.|+ .+++|++||+||+++||.+..+... ..|.
T Consensus 314 ~~~~i~~~kp-G~~~~di~~~a~~~i~~~l~~~G~~~g~~~~~~~~g~~~~~~~H~~GHgiGl~vHd~~~~~~~~-~~~~ 391 (494)
T 2iw2_A 314 SRAVMGAMKP-GVWWPDMHRLADRIHLEELAHMGILSGSVDAMVQAHLGAVFMPHGLGHFLGIDVHDVGGYPEGV-ERID 391 (494)
T ss_dssp HHHHHHHCCT-TCBHHHHHHHHHHHHHHHHHHTTSBCSCHHHHHHTTTHHHHCCSCSCCBCSSSSSCSCSSCTTC-CCCC
T ss_pred HHHHHHHhCC-CCcHHHHHHHHHHHHHHHHHHcCCccccHHHHHhcccccccCCCCCcCCCCcccccCCCccccc-cccc
Confidence 9999999999 99999999998 22 23443 3689999999999999976543110 0000
Q ss_pred cceecCCCCccccCCCCCCCCCCCCCcEEEeCCeeeEcCC---------------CCCcccccccc-eEEEceeEEEeCC
Q psy247 332 VVFTVEPGMDVHDCAAIPRTIPVAPGMVFTVEPGVYISKD---------------CKETRPEFRGM-GIRIEDDILIDKS 395 (413)
Q Consensus 332 ~~~~~~pg~~~~~~~~~~~~~~L~~GMv~~iEPgi~~~~~---------------~~~~~~~~~~~-gvriED~vlVt~~ 395 (413)
.|++. ......+|+||||||||||+|++.. +++++++|+|+ |+||||+|+||++
T Consensus 392 -----~p~~~-----~~~~~~~L~~GMV~tiEPGiy~~~~~~~~~~~d~~~~~~~~~~~~~~~~g~gGvRiED~vlVte~ 461 (494)
T 2iw2_A 392 -----EPGLR-----SLRTARHLQPGMVLTVEPGIYFIDHLLDEALADPARASFFNREVLQRFRGFGGVRIEEDVVVTDS 461 (494)
T ss_dssp -----STTGG-----GCSCCCBCCTTCEEEECCEEECCHHHHHHHHHCHHHHTTBCHHHHHHHTTCCEEECBEEEEECSS
T ss_pred -----ccccc-----cCCCCCEeCCCCEEEECCccccccccchhhccccccccccccchhhhhCCCCEEEeeeEEEEcCC
Confidence 01110 0235789999999999999998631 23445556675 8999999999999
Q ss_pred CCcccCCCCCCCCccccC
Q psy247 396 SNVENLSAMCPKNIDEIE 413 (413)
Q Consensus 396 G~~e~Lt~~~p~~~~~ie 413 (413)
|+ |+||. +|+++.+||
T Consensus 462 G~-e~LT~-~p~~~~~ie 477 (494)
T 2iw2_A 462 GI-ELLTC-VPRTVEEIE 477 (494)
T ss_dssp SE-EECCC-CCCSHHHHH
T ss_pred cC-eECCC-CCCcHHHHH
Confidence 99 99997 899998886
No 4
>3rva_A Organophosphorus acid anhydrolase; PITA-bread fold, binuclea center, BI-functional, prolidase, nerve agents, XAA-Pro DIP hydrolase; 1.80A {Alteromonas macleodii}
Probab=100.00 E-value=4e-62 Score=499.92 Aligned_cols=326 Identities=26% Similarity=0.455 Sum_probs=259.9
Q ss_pred CCCCcceeeeecCceEEecCCCC-CCEEEEEEcCCCCCceEEEEEeCcchhhhccCCCcccH----------------hh
Q psy247 1 MTEKIPYIFRQNTDFFYFTGCLE-PDSAVVIHGASDENFKSELFVKRKDAKAELWDGPRTGK----------------AQ 63 (413)
Q Consensus 1 ~~~~~~~~f~q~~n~~YltG~~~-~~~~lv~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~----------------~~ 63 (413)
.++|++|+|||+++|+||||+.+ |+++|+++.++ ++.||+++.. .+|.+.+.+. ++
T Consensus 42 ~~~D~~~~frq~~~f~yl~g~~e~p~~~L~~~~~~----~~~l~~~~~~---d~w~~~~~~~~~~~~~~~~v~~~~~~~~ 114 (451)
T 3rva_A 42 FLDDNHYPFKVNPQFKAWVPVIDNPNCWLVVNGVD----KPTLIFYRPE---DFWHKVPPEPNDFWTDSFDIKLLQQADA 114 (451)
T ss_dssp TTSSCBCCCCCCHHHHTTCSCCSCSSCEEEECSSS----CCEEEEECCC---CTTSCCCCSCCSTTGGGSEEEEESSGGG
T ss_pred ecCCCCCCcccCCCceEEeccCCCCCEEEEEecCC----CeEEEeeccH---HhhhccccCcchhHHhccCeEEEecHHH
Confidence 36899999999999999999988 99999997654 3456666632 1566543322 23
Q ss_pred HhhhcCCC-------------------CCCcccchHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHhccCCCCCHHH
Q psy247 64 LNGYVPRR-------------------KDYSWNVPKQLFHQLRLYKSDSEQEMMRETCRIASEGFKETIGFSKPGRTEHE 124 (413)
Q Consensus 64 ~~~~l~~~-------------------~~~~~~d~~~~l~~~R~vKs~~Ei~~~r~A~~i~~~~~~~~~~~~~~G~tE~e 124 (413)
+.+.|+.. ....++++++++.++|++||++||+.||+|++++++++..+++.++||+||.|
T Consensus 115 ~~~~l~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~lR~iKs~~EI~~mr~A~~ia~~a~~~~~~~i~pG~tE~e 194 (451)
T 3rva_A 115 VEKFLPYDKSRFAYVGEYIEVAKALGFDNVNPDRVLHYLHYQRAYKTDYELDCMREANKLAVAGHKAAEQAFREGKSEFD 194 (451)
T ss_dssp GGGGSCSCGGGEEEESSCHHHHHHHTCSCBSCHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHH
T ss_pred HHHHHhhccCceEEEccCcCHHHhhhhcccCchHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCHHH
Confidence 44444322 12356789999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCCCCCCCceeecCCCccccccccCCcccccCcceecccccCCCCCCHHHHHhhhHHHHHhhcccccC
Q psy247 125 LFTKFDYEVRMRGAQILAYPPVVASGDNANVIHYVHNNQKCCHGDLLLMDAGFSKPGRTEHELFTKFDYEVRMRGAQILA 204 (413)
Q Consensus 125 l~~~~~~~~~~~G~~~~~~~~iv~sG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (413)
|++++...+ +.|+.. .+
T Consensus 195 l~~~~~~~~-~~g~~~--------------------------------------------------------------~~ 211 (451)
T 3rva_A 195 INLAYAAAS-RQGDND--------------------------------------------------------------VP 211 (451)
T ss_dssp HHHHHHHHH-TCCTTT--------------------------------------------------------------SS
T ss_pred HHHHHHHHH-HcCCCc--------------------------------------------------------------CC
Confidence 998766543 234332 35
Q ss_pred CCceeccCCCccccccccCCcc-ccCCCEEEEecceeeCcEEeceEEEEeecCCC--CHHHHHHHHHHHHHHHHHHHhcc
Q psy247 205 YPPVVASGDNANVIHYVHNNQK-CCHGDLLLMDAGCELNGYDSDITRTWPISGQF--TDHQKVLYEIVLDTQLKLLKLCE 281 (413)
Q Consensus 205 ~~~~v~~g~~~~~~h~~~~~~~-i~~Gd~v~iD~g~~~~GY~aDitRT~~v~G~~--~~~~~~~~~~~~~a~~~~~~~lk 281 (413)
|++++++|.|++++||.|++++ +++||+|+||+|++|+||++|+||||++ |++ +++++++|++++++|+++++++|
T Consensus 212 f~~IVasG~naa~~H~~~~~~~~l~~GdlVliD~G~~~~GY~sDiTRT~~v-G~~~~~~~~~~ly~~vl~aq~aai~~ik 290 (451)
T 3rva_A 212 YTSIVALNEHASILHYMQCDTVAPKESRSFLIDAGANYHGYAADITRTYAQ-EGVHNSAMFRDLIQAVDKVTLTLVDSLK 290 (451)
T ss_dssp SCCEEEEGGGGGCTTCCCCCSSCCSSCCEEEEEEEEEETTEEEEEEEEEEC-TTSTTHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred cCcEEEECCcccccCCCCCCCcccCCCCEEEEEeeEEECCEEEEeEEEEEe-CCCCCCHHHHHHHHHHHHHHHHHHHHhC
Confidence 6677777777888888888875 6899999999999999999999999999 776 78999999999999999999999
Q ss_pred cCCCCHHHHHHHH--HH-----------------HHcCc--ccccccccccCCCCccCCCCCCCCC---CCCCCcceecC
Q psy247 282 KSDSALNFIYRYA--YV-----------------FQIGF--KFCPHHSSHYLGMDVHDCAAIPRTI---PVAPGVVFTVE 337 (413)
Q Consensus 282 p~G~~~~ei~~~~--~~-----------------~~~g~--~~~~h~~GHgiGl~~~E~p~~~~~~---~~~~g~~~~~~ 337 (413)
| |++++||++++ .+ .+.|+ .+|+|++||+||+++||.|.+.... .+.+
T Consensus 291 P-G~~~~di~~aa~~~i~~~l~~~G~~~~~~~~~~~~g~~~~~f~H~~GHgiGldvHe~p~~~~~~~g~~~~~------- 362 (451)
T 3rva_A 291 P-GVAYTDIHLLAHDGIAQILHDTGMVNLTPPEIVEMGITRTFFPHGIGHFLGLQVHDVGGLVNDDRGTPKPA------- 362 (451)
T ss_dssp T-TCBHHHHHHHHHHHHHHHHHHTTSBCSCHHHHHHTTTHHHHCCSCSCCBCSSSSSCTTTTBSSTTCCBCCC-------
T ss_pred C-CCcHHHHHHHHHHHHHHHHHhcCCccccHHHHHhcCcccccCCCCCcccccCCcccCcccccccccccccc-------
Confidence 9 99999999987 22 14454 5899999999999999999864310 0000
Q ss_pred CCCccccCCCCCCCCCCCCCcEEEeCCeeeEcC--------------CCCCcccccccc-eEEEceeEEEeCCCCcccCC
Q psy247 338 PGMDVHDCAAIPRTIPVAPGMVFTVEPGVYISK--------------DCKETRPEFRGM-GIRIEDDILIDKSSNVENLS 402 (413)
Q Consensus 338 pg~~~~~~~~~~~~~~L~~GMv~~iEPgi~~~~--------------~~~~~~~~~~~~-gvriED~vlVt~~G~~e~Lt 402 (413)
|.. .+ ..++..+|+||||||||||+|+++ .+|.+.++|+|+ ||||||+|+||++|+ |+||
T Consensus 363 ~~~--~~--~l~~~~~L~~GMV~TIEPGiY~~~~~~~~~~~~~~~~~~~~~~~~~~~g~gGvRIED~vlVT~~G~-e~LT 437 (451)
T 3rva_A 363 PDD--HP--FLRCTRMVEARQVFTIEPGLYFIDSLLRDLKATPASKYINWDTIDAYKPFGGIRIEDNIIVHRDKN-ENMT 437 (451)
T ss_dssp CTT--CT--TCCCCCBCCTTCEEEECCEEECCHHHHHHHHTSGGGGGBCHHHHHHHGGGCEEECBEEEEECSSCE-EEHH
T ss_pred ccc--cc--cCCCCCCcCCCCEEEECCEEeEchhhhhhhcccccccccccchhhhcCCCCEEEcccEEEECCCcc-eECC
Confidence 000 00 024578999999999999999964 267777788887 899999999999999 9999
Q ss_pred CCCCCCcc
Q psy247 403 AMCPKNID 410 (413)
Q Consensus 403 ~~~p~~~~ 410 (413)
...||+++
T Consensus 438 ~~~~~~~~ 445 (451)
T 3rva_A 438 RDLDLNLE 445 (451)
T ss_dssp HHTTCCSC
T ss_pred CCCCcccc
Confidence 87677664
No 5
>3l24_A XAA-Pro dipeptidase; PITA-bread, detoxification, hydrolase, manganese, metal-binding, metalloprotease, protease; 2.30A {Alteromonas SP} PDB: 3l7g_A*
Probab=100.00 E-value=2.8e-61 Score=498.54 Aligned_cols=325 Identities=25% Similarity=0.390 Sum_probs=256.4
Q ss_pred CCCcceeeeecCceEEecCCCC-CCEEEEEEcCCCCCceEEEEEeCcchhhhccCCCcccHh----------------hH
Q psy247 2 TEKIPYIFRQNTDFFYFTGCLE-PDSAVVIHGASDENFKSELFVKRKDAKAELWDGPRTGKA----------------QL 64 (413)
Q Consensus 2 ~~~~~~~f~q~~n~~YltG~~~-~~~~lv~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~----------------~~ 64 (413)
++|++|+|||+++|+||||+.+ |+++|+++.++ ++.||+++.. .+|.+.+.+.+ ++
T Consensus 43 ~~D~~~pFrq~s~F~yl~g~~e~p~~~l~~~~~~----~~~l~~~~~~---d~w~g~~~~~~~~~~~~~~v~~~~~~~~~ 115 (517)
T 3l24_A 43 LDDMYYPFKVNPQFKAWLPVIDNPHCWIVANGTD----KPKLIFYRPV---DFWHKVPDEPNEYWADYFDIELLVKPDQV 115 (517)
T ss_dssp TSSCBCCCCCCHHHHTTSSCCSCSSCEEEECSSS----CCEEEEECCC---CSSSCCCCCCCSGGGGGSEEEEESSGGGC
T ss_pred cCCCCCCceecCCceEEeccCCCCCEEEEEecCC----CeEEEEecch---hhhhccccCchhhhhhccCeEEEcCHHHH
Confidence 6899999999999999999987 99999997654 3456666631 16766443322 33
Q ss_pred hhhcCCC-------------------CCCcccchHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHhccCCCCCHHHH
Q psy247 65 NGYVPRR-------------------KDYSWNVPKQLFHQLRLYKSDSEQEMMRETCRIASEGFKETIGFSKPGRTEHEL 125 (413)
Q Consensus 65 ~~~l~~~-------------------~~~~~~d~~~~l~~~R~vKs~~Ei~~~r~A~~i~~~~~~~~~~~~~~G~tE~el 125 (413)
.+.|+.. ....++++++++.++|++||++||+.||+|++++++++..+++.++||+||.||
T Consensus 116 ~~~L~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~lR~iKs~~EIe~mR~A~~ia~~a~~~~~~~ikpG~tE~el 195 (517)
T 3l24_A 116 EKLLPYDKARFAYIGEYLEVAQALGFELMNPEPVMNFYHYHRAYKTQYELACMREANKIAVQGHKAARDAFFQGKSEFEI 195 (517)
T ss_dssp GGGSCSCCTTEEEESSCHHHHHHHTCCCBSCHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHH
T ss_pred HHHHhhccCceEEEcCCcCHHHhhhhccCCchhHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHH
Confidence 4444322 123567899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCCCCCCceeecCCCccccccccCCcccccCcceecccccCCCCCCHHHHHhhhHHHHHhhcccccCC
Q psy247 126 FTKFDYEVRMRGAQILAYPPVVASGDNANVIHYVHNNQKCCHGDLLLMDAGFSKPGRTEHELFTKFDYEVRMRGAQILAY 205 (413)
Q Consensus 126 ~~~~~~~~~~~G~~~~~~~~iv~sG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (413)
++++...+ +.|+. +.+|
T Consensus 196 ~~~~~~~~-~~g~~--------------------------------------------------------------~~sf 212 (517)
T 3l24_A 196 QQAYLLAT-QHSEN--------------------------------------------------------------DNPY 212 (517)
T ss_dssp HHHHHHHH-TCCGG--------------------------------------------------------------GSSS
T ss_pred HHHHHHHH-HcCCC--------------------------------------------------------------cCCc
Confidence 98766543 22322 2467
Q ss_pred CceeccCCCccccccccCCcc-ccCCCEEEEecceeeCcEEeceEEEEeecCCCCHHHHHHHHHHHHHHHHHHHhcccCC
Q psy247 206 PPVVASGDNANVIHYVHNNQK-CCHGDLLLMDAGCELNGYDSDITRTWPISGQFTDHQKVLYEIVLDTQLKLLKLCEKSD 284 (413)
Q Consensus 206 ~~~v~~g~~~~~~h~~~~~~~-i~~Gd~v~iD~g~~~~GY~aDitRT~~v~G~~~~~~~~~~~~~~~a~~~~~~~lkp~G 284 (413)
+++|++|.|++++||.|++++ +++||+|++|+|++|+||++|+||||++ |+ +++++++|++++++|+++++++|| |
T Consensus 213 ~~IVasG~naa~~H~~p~~~~~l~~GDlVliD~G~~~~GY~sDiTRT~~v-G~-~~e~~~ly~~vl~Aq~aai~~ikP-G 289 (517)
T 3l24_A 213 GNIVALNENCAILHYTHFDRVAPATHRSFLIDAGANFNGYAADITRTYDF-TG-EGEFAELVATMKQHQIALMNQLAP-G 289 (517)
T ss_dssp CCEEEEGGGGGCTTCCCCCSSCCSSCCEEEEEEEEEETTEEEEEEEEEES-SS-CSHHHHHHHHHHHHHHHHHTTCCT-T
T ss_pred CCEEEEccccccccCCCCCCccccCCCEEEEeecEEECCEEEEeEEEEEc-CC-CHHHHHHHHHHHHHHHHHHHHcCC-C
Confidence 777888888888899998875 7999999999999999999999999999 66 488999999999999999999999 9
Q ss_pred CCHHHHHHHH--HH-----------------HHcCc--ccccccccccCCCCccCCCCCCCCCCCCCCcceecCCCCccc
Q psy247 285 SALNFIYRYA--YV-----------------FQIGF--KFCPHHSSHYLGMDVHDCAAIPRTIPVAPGVVFTVEPGMDVH 343 (413)
Q Consensus 285 ~~~~ei~~~~--~~-----------------~~~g~--~~~~h~~GHgiGl~~~E~p~~~~~~~~~~g~~~~~~pg~~~~ 343 (413)
++++||++++ .+ .+.|+ .+++|++||+||+++||.|.+..... |-.. -.|. ..
T Consensus 290 v~~~dI~~aa~~~i~~~L~~~G~~~~~~~~~~~~g~~~~~f~HglGHgiGLdvHE~p~~~~~~~---g~~~-~~~~--~~ 363 (517)
T 3l24_A 290 KLYGELHLDCHQRVAQTLSDFNIVDLSADEIVAKGITSTFFPHGLGHHIGLQVHDVGGFMADEQ---GAHQ-EPPE--GH 363 (517)
T ss_dssp CBHHHHHHHHHHHHHHHHHHTTSBSSCHHHHHHTTCGGGTCCSCSCCBCSSSSSCCCCTTC-------------------
T ss_pred CcHHHHHHHHHHHHHHHHHhcCCccccHHHHHhcCcccccCCCCCCCCCCcccccCcccccccc---cccc-cccc--cc
Confidence 9999999987 22 24454 58999999999999999998753100 0000 0000 00
Q ss_pred cCCCCCCCCCCCCCcEEEeCCeeeEcC--------------CCCCcccccccc-eEEEceeEEEeCCCCcccCCCCCCCC
Q psy247 344 DCAAIPRTIPVAPGMVFTVEPGVYISK--------------DCKETRPEFRGM-GIRIEDDILIDKSSNVENLSAMCPKN 408 (413)
Q Consensus 344 ~~~~~~~~~~L~~GMv~~iEPgi~~~~--------------~~~~~~~~~~~~-gvriED~vlVt~~G~~e~Lt~~~p~~ 408 (413)
+ ..++..+|+||||||||||+|+++ .+|.+.++|+|+ ||||||+|+||++|+ |+||+.+|++
T Consensus 364 p--~l~~~~~Le~GMV~TIEPGiY~~~~~l~~~~~~~~~~~~~~~~~~~~~g~GGVRIED~VlVT~~G~-e~LT~~~~~~ 440 (517)
T 3l24_A 364 P--FLRCTRKIEANQVFTIEPGLYFIDSLLGDLAATDNNQHINWDKVAELKPFGGIRIEDNIIVHEDSL-ENMTRELRLR 440 (517)
T ss_dssp ----CCTTCBCCTTEEEEECCEEECCHHHHHHHHTSGGGGGBCHHHHHHHGGGCEEECBEEEEECSSCE-EEHHHHTTCC
T ss_pred c--cCCCCccccCCcEEEECCEEeechhhhhhhcccccccccccchhhhcCCCCEEEEeeEEEECCCcC-eeCCCccchh
Confidence 0 024578999999999999999963 256667778887 899999999999999 9999888887
No 6
>4fkc_A XAA-Pro aminopeptidase; PITA-bread structure, prolidase, hydrolase; 2.60A {Thermococcus sibiricus}
Probab=100.00 E-value=4.4e-59 Score=468.80 Aligned_cols=302 Identities=25% Similarity=0.409 Sum_probs=254.6
Q ss_pred eeeeecCceEEecCCCCCCE-----EEEEEcCCCCCceEEEEEeCcchh-hhccCCCc-------ccHhhH---------
Q psy247 7 YIFRQNTDFFYFTGCLEPDS-----AVVIHGASDENFKSELFVKRKDAK-AELWDGPR-------TGKAQL--------- 64 (413)
Q Consensus 7 ~~f~q~~n~~YltG~~~~~~-----~lv~~~~~~~~~~~~l~v~~~~~~-~~~~~~~~-------~~~~~~--------- 64 (413)
+.+.+++||+||||+..++. +|+++.++ ..+++.++.... .+.|.+.. ...+.+
T Consensus 34 lli~~~~ni~YLTG~~~~~~~~~~~~lvv~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 109 (377)
T 4fkc_A 34 ALVAPGSNFYYLTGFNPLGTLERLFVLILPSEG----LLTAIAPRLYEKELEEFNGEVVLWSDSENPYKIFATKIKETFK 109 (377)
T ss_dssp EEECSSHHHHHHHSCCCCCCSSSCCEEEEESSS----CCEEEEEGGGHHHHTTCSSEEEEECTTSCHHHHHHHHHHHHSC
T ss_pred EEECCChhheeecCCCCCCCCcceEEEEEcCCC----cEEEEeccchHHHHHhcCCCEEEeccccCHHHHHHHHHHHhhh
Confidence 66789999999999976553 67777664 567777765432 22333211 111211
Q ss_pred ----------------hhhcCCCCCCcccchHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHhccCCCCCHHHHHHH
Q psy247 65 ----------------NGYVPRRKDYSWNVPKQLFHQLRLYKSDSEQEMMRETCRIASEGFKETIGFSKPGRTEHELFTK 128 (413)
Q Consensus 65 ----------------~~~l~~~~~~~~~d~~~~l~~~R~vKs~~Ei~~~r~A~~i~~~~~~~~~~~~~~G~tE~el~~~ 128 (413)
..+...+++.+++|+++++.++|+|||++||+.||+|++++++++.++++.+++|+||.|+++.
T Consensus 110 ~~~~i~~d~~~~~~~~~~l~~~~~~~~~~d~~~~i~~lR~iKs~~EI~~~r~A~~i~~~a~~~~~~~~~~G~tE~el~~~ 189 (377)
T 4fkc_A 110 EGEKLLIDDTMPVGVFLKAKDIFDKYSLHPISPVISELREIKDKDEIKAHKKAAEIVDKVFYRFIEGKLEGKSERELANR 189 (377)
T ss_dssp SSCEEEECTTSCHHHHHHTHHHHTTSEEEESHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHHHHTTSCCTTCBHHHHHHH
T ss_pred ccceeeeeccccHHHHHHHHhhCCCCeEEEhHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhhhhccCCCccHHHHHHH
Confidence 1122223567889999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHc-CCCCCCCCceeecCCCccccccccCCcccccCcceecccccCCCCCCHHHHHhhhHHHHHhhcccccCCCc
Q psy247 129 FDYEVRMR-GAQILAYPPVVASGDNANVIHYVHNNQKCCHGDLLLMDAGFSKPGRTEHELFTKFDYEVRMRGAQILAYPP 207 (413)
Q Consensus 129 ~~~~~~~~-G~~~~~~~~iv~sG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (413)
+++.+.++ |+... +|++
T Consensus 190 ~~~~~~~~~g~~~~--------------------------------------------------------------~f~~ 207 (377)
T 4fkc_A 190 IEYMIKNEFGADDV--------------------------------------------------------------SFEP 207 (377)
T ss_dssp HHHHHHTSTTCCEE--------------------------------------------------------------SSCC
T ss_pred HhhhhhhccCCCCc--------------------------------------------------------------ccCc
Confidence 99888765 44433 4566
Q ss_pred eeccCCCccccccccCCccccCCCEEEEecceeeCcEEeceEEEEeecCCCCHHHHHHHHHHHHHHHHHHHhcccCCCCH
Q psy247 208 VVASGDNANVIHYVHNNQKCCHGDLLLMDAGCELNGYDSDITRTWPISGQFTDHQKVLYEIVLDTQLKLLKLCEKSDSAL 287 (413)
Q Consensus 208 ~v~~g~~~~~~h~~~~~~~i~~Gd~v~iD~g~~~~GY~aDitRT~~v~G~~~~~~~~~~~~~~~a~~~~~~~lkp~G~~~ 287 (413)
++++|.|++.+|+.|++++|++||+|++|+|++|+||++|+|||+++ |+|+++|+++|+.++++++++++++|| |+++
T Consensus 208 iv~~G~n~~~~H~~~~~~~l~~gd~v~iD~g~~~~gy~sD~tRT~~~-G~~~~~~~~~~~~v~~a~~~~~~~~~p-G~~~ 285 (377)
T 4fkc_A 208 IVASGPNGANPHHRPSHRKIRKGDVVIFDYGAKYLGYCSDVTRTVVV-GPPSEEVKKVYEIVKEAQETAVQKVAE-GIPA 285 (377)
T ss_dssp EEEEGGGGGCTTCCCCSCBCCTTCEEEEEECEEETTEECCEEEEEES-SSCCTHHHHHHHHHHHHHHHHHHHCBT-TCBH
T ss_pred cccccccccccccccccccccccccccccccccccCcccccceeEEE-ecCCHHHHHhhhhhHHHHHHHHHhhcC-Ccch
Confidence 66677777788888999999999999999999999999999999988 999999999999999999999999999 9999
Q ss_pred HHHHHHH--HHHHcCc-ccccccccccCCCCccCCCCCCCCCCCCCCcceecCCCCccccCCCCCCCCCCCCCcEEEeCC
Q psy247 288 NFIYRYA--YVFQIGF-KFCPHHSSHYLGMDVHDCAAIPRTIPVAPGVVFTVEPGMDVHDCAAIPRTIPVAPGMVFTVEP 364 (413)
Q Consensus 288 ~ei~~~~--~~~~~g~-~~~~h~~GHgiGl~~~E~p~~~~~~~~~~g~~~~~~pg~~~~~~~~~~~~~~L~~GMv~~iEP 364 (413)
+++++++ .+.+.|+ .+++|++|||||+++||.|.+. .+++.+|+|||||+|||
T Consensus 286 ~~i~~~~~~~~~~~g~~~~~~h~~GHgiGl~~hE~P~i~------------------------~~~~~~L~~Gmv~tiEP 341 (377)
T 4fkc_A 286 EVVDATARGIISKYGYGEYFIHRTGHGLGIDVHEEPYIS------------------------PGNKKILKDGMVFTIEP 341 (377)
T ss_dssp HHHHHHHHHHHHHTTCTTTCCSCSEEECSSSSSEEEEEC------------------------SSCCCBCCTTCEEEECC
T ss_pred hhhHHHHHHHHHHhcccccCCCCCeEeCCCccccCCccc------------------------CCCCCEeCCCCEEEECC
Confidence 9999998 7778898 6889999999999999999764 34678999999999999
Q ss_pred eeeEcCCCCCcccccccceEEEceeEEEeCCCCcccCCCCCCCCcccc
Q psy247 365 GVYISKDCKETRPEFRGMGIRIEDDILIDKSSNVENLSAMCPKNIDEI 412 (413)
Q Consensus 365 gi~~~~~~~~~~~~~~~~gvriED~vlVt~~G~~e~Lt~~~p~~~~~i 412 (413)
|+|+++. +|+||||+|+||++|+ |+||. +||++..|
T Consensus 342 giy~~g~----------~GvriEd~v~Vt~~g~-e~Lt~-~p~eli~l 377 (377)
T 4fkc_A 342 GIYLQGK----------FGVRIEDDVALVDKKG-IRLTN-ADRELITL 377 (377)
T ss_dssp EEEETTT----------EEEECBEEEEEETTEE-EESCC-SCCSCCBC
T ss_pred eeEECCc----------cEEEEccEEEEECCCc-EECCC-CCCCeEeC
Confidence 9999986 8999999999999999 99998 79998764
No 7
>3q6d_A Proline dipeptidase; structural genomics, csgid, center for structural genomics O infectious diseases, aminopeptidase, viral protein; 1.97A {Bacillus anthracis}
Probab=100.00 E-value=1.8e-57 Score=453.65 Aligned_cols=300 Identities=26% Similarity=0.443 Sum_probs=254.4
Q ss_pred eeeeecCceEEecCCCCCCEEEEEEcCCCCCceEEEEEeCcchhh---hcc-----CCCcccHhhHhhhc----------
Q psy247 7 YIFRQNTDFFYFTGCLEPDSAVVIHGASDENFKSELFVKRKDAKA---ELW-----DGPRTGKAQLNGYV---------- 68 (413)
Q Consensus 7 ~~f~q~~n~~YltG~~~~~~~lv~~~~~~~~~~~~l~v~~~~~~~---~~~-----~~~~~~~~~~~~~l---------- 68 (413)
+.+.+..|++|||||...+++++++.+ +.+||++.+.... +.. .......+.+.+++
T Consensus 22 ~lI~~~~ni~YLtGf~g~~~~llvt~~-----~~~l~~d~r~~~~a~~~~~~~~v~~~~~~~~~~l~~~l~~~~~~~igv 96 (356)
T 3q6d_A 22 ILLTNEHSRRYMANFTGTAGVVLISKK-----RAQFITDFRYVEQASKQAVGYEIVQHAGLIIDEVAKQVKELGIQKLGF 96 (356)
T ss_dssp EEECCHHHHHHHHCCCSSSCEEEEESS-----CEEEEECGGGHHHHHHHSTTSEEEECSSCHHHHHHHHHHHHTCSEEEE
T ss_pred EEECChhhceEccCCCCCCeEEEEECC-----CeEEEEChhhHHHHHhhCCCCEEEEeCCCHHHHHHHHHHhcCCceEEE
Confidence 566778899999999988888888865 4788998764321 111 00011122222222
Q ss_pred --------------CCCCCCcccchHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHhccCCCCCHHHHHHHHHHHHH
Q psy247 69 --------------PRRKDYSWNVPKQLFHQLRLYKSDSEQEMMRETCRIASEGFKETIGFSKPGRTEHELFTKFDYEVR 134 (413)
Q Consensus 69 --------------~~~~~~~~~d~~~~l~~~R~vKs~~Ei~~~r~A~~i~~~~~~~~~~~~~~G~tE~el~~~~~~~~~ 134 (413)
+.+++ ++++++.++..+|++||++||+.||+|++++++++..+++.++||+||.|+++.+++.++
T Consensus 97 e~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~R~iK~~~Ei~~~r~A~~i~~~~~~~~~~~i~~G~te~e~~~~~~~~~~ 175 (356)
T 3q6d_A 97 EQDTLTYSSYSAHKEAIDA-EFIPTSGLVEKLRLIKTDSEIKILKEAAQIADAAFEHILSFIRPGVSEIEVSNELEFFMR 175 (356)
T ss_dssp ETTTSBHHHHHHHHHHCCS-EEEEECSHHHHHHTSCCHHHHHHHHHHHHHHHHHHHHHTTTCCTTCBHHHHHHHHHHHHH
T ss_pred cCccCCHHHHHHHhhhccc-ceecchhhhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHH
Confidence 22344 788999999999999999999999999999999999999999999999999999999999
Q ss_pred HcCCCCCCCCceeecCCCccccccccCCcccccCcceecccccCCCCCCHHHHHhhhHHHHHhhcccccCCCceeccCCC
Q psy247 135 MRGAQILAYPPVVASGDNANVIHYVHNNQKCCHGDLLLMDAGFSKPGRTEHELFTKFDYEVRMRGAQILAYPPVVASGDN 214 (413)
Q Consensus 135 ~~G~~~~~~~~iv~sG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g~~ 214 (413)
++|++..+| ++++++|.|
T Consensus 176 ~~g~~~~~f--------------------------------------------------------------~~iv~~g~n 193 (356)
T 3q6d_A 176 KQGATSSSF--------------------------------------------------------------DIIVASGLR 193 (356)
T ss_dssp HTTCSEESS--------------------------------------------------------------CCEEEEGGG
T ss_pred HCCCCcCCC--------------------------------------------------------------CCEEEEcCc
Confidence 998775444 455555666
Q ss_pred ccccccccCCccccCCCEEEEecceeeCcEEeceEEEEeecCCCCHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHH
Q psy247 215 ANVIHYVHNNQKCCHGDLLLMDAGCELNGYDSDITRTWPISGQFTDHQKVLYEIVLDTQLKLLKLCEKSDSALNFIYRYA 294 (413)
Q Consensus 215 ~~~~h~~~~~~~i~~Gd~v~iD~g~~~~GY~aDitRT~~v~G~~~~~~~~~~~~~~~a~~~~~~~lkp~G~~~~ei~~~~ 294 (413)
++++|+.|++++|++||+|++|+|++|+||++|+|||+++ |+|+++|+++|+.+++++.++++++|| |+++++|++++
T Consensus 194 ~~~~H~~~~~~~l~~gd~v~iD~g~~~~gy~sD~tRT~~~-G~~~~~~~~~~~~v~~a~~~~~~~~~p-G~~~~~i~~~~ 271 (356)
T 3q6d_A 194 SALPHGVASEKVIETGDFVTLDFGAYYKGYCSDITRTIAV-GEPSDKLKEIYNIVLEAQLRGVNGIKA-GLTGREADALT 271 (356)
T ss_dssp GGCTTCBCCSCBCCTTCEEEEEECEEETTEECCEEEEEES-SCCCHHHHHHHHHHHHHHHHHHHHCCT-TCBHHHHHHHH
T ss_pred cccCCCCCCCcccCCCCEEEEEEeEEECCEEeeeEEEEEc-CCCCHHHHHHHHHHHHHHHHHHHHhcC-CCcHHHHHHHH
Confidence 6777888888999999999999999999999999999999 999999999999999999999999999 99999999999
Q ss_pred --HHHHcCc-ccccccccccCCCCccCCCCCCCCCCCCCCcceecCCCCccccCCCCCCCCCCCCCcEEEeCCeeeEcCC
Q psy247 295 --YVFQIGF-KFCPHHSSHYLGMDVHDCAAIPRTIPVAPGVVFTVEPGMDVHDCAAIPRTIPVAPGMVFTVEPGVYISKD 371 (413)
Q Consensus 295 --~~~~~g~-~~~~h~~GHgiGl~~~E~p~~~~~~~~~~g~~~~~~pg~~~~~~~~~~~~~~L~~GMv~~iEPgi~~~~~ 371 (413)
.+.+.|+ .++.|++||+||+++||.|.+. ..++.+|+|||||+|||++|+++.
T Consensus 272 ~~~~~~~g~~~~~~h~~GHgiGl~~he~p~i~------------------------~~~~~~l~~Gmv~tiEPgiy~~g~ 327 (356)
T 3q6d_A 272 RDYITEKGYGEYFGHSTGHGIGLEIHEAPGLA------------------------FRSDTVLEPGMAVTVEPGIYIPGI 327 (356)
T ss_dssp HHHHHHTTCGGGCCSCSEEECSSSSSEEEEES------------------------TTCCCBCCTTCEEEECCEEEETTT
T ss_pred HHHHHHcCCcccCCCCCcccCCCCcCcCCCCC------------------------CCCCCCcCCCCEEEECCEEEECCC
Confidence 7788898 6789999999999999999753 235789999999999999999876
Q ss_pred CCCcccccccceEEEceeEEEeCCCCcccCCCCCCCCcccc
Q psy247 372 CKETRPEFRGMGIRIEDDILIDKSSNVENLSAMCPKNIDEI 412 (413)
Q Consensus 372 ~~~~~~~~~~~gvriED~vlVt~~G~~e~Lt~~~p~~~~~i 412 (413)
+|+||||+|+||++|+ |+||. +|+++..|
T Consensus 328 ----------~gvriEd~v~vt~~G~-e~Lt~-~p~~l~~~ 356 (356)
T 3q6d_A 328 ----------GGVRIEDDIIVTSEGN-EVITK-SPKELIIL 356 (356)
T ss_dssp ----------EEEECBEEEEECSSSE-EECCC-SCCSCCBC
T ss_pred ----------CeEEEccEEEEeCCcc-eeCCC-CCcceEeC
Confidence 7999999999999999 99998 69998764
No 8
>1wn1_A Dipeptidase; prolidase, cobalt(II), structural genomics, riken structural genomics/proteomics initiative, RSGI, hydrolase; 2.25A {Pyrococcus horikoshii} PDB: 2how_A
Probab=100.00 E-value=4.1e-57 Score=451.29 Aligned_cols=304 Identities=27% Similarity=0.461 Sum_probs=256.0
Q ss_pred Ccc-eeeeecCceEEecCCC-----CCCEEEEEEcCCCCCceEEEEEeCcchhhh------ccCCCcccHhhHhhhcCC-
Q psy247 4 KIP-YIFRQNTDFFYFTGCL-----EPDSAVVIHGASDENFKSELFVKRKDAKAE------LWDGPRTGKAQLNGYVPR- 70 (413)
Q Consensus 4 ~~~-~~f~q~~n~~YltG~~-----~~~~~lv~~~~~~~~~~~~l~v~~~~~~~~------~~~~~~~~~~~~~~~l~~- 70 (413)
+.+ +.+.+++|++||||+. ++.++++++.++ +++||+++.+.... .|.......+.+.++++.
T Consensus 14 ~~d~~li~~~~n~~yltG~~~~~~~~~~~~l~i~~~~----~~~l~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~l~~~ 89 (356)
T 1wn1_A 14 GFDGALISPGTNLYYLTGLRLHEVGERLAILAVSAEG----DYRFLAPSLYENVVNNFPATFWHDGENPYAKLREILEEL 89 (356)
T ss_dssp TCSEEEECSSHHHHHHHCCCCSCCTTSCCEEEEETTS----CEEEEEEGGGTTTTTTSCEEEECTTSCHHHHHHHHHHHT
T ss_pred CCcEEEECCCccceeecCCcCCCCCCceEEEEEeCCC----cEEEEECcccHHHhhCCeEEEEcCCCCHHHHHHHHHHHh
Confidence 344 6677888999999996 334788888653 58999998764320 122111112333333221
Q ss_pred -----------------------CCCCcccchHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHhccCCCCCHHHHHH
Q psy247 71 -----------------------RKDYSWNVPKQLFHQLRLYKSDSEQEMMRETCRIASEGFKETIGFSKPGRTEHELFT 127 (413)
Q Consensus 71 -----------------------~~~~~~~d~~~~l~~~R~vKs~~Ei~~~r~A~~i~~~~~~~~~~~~~~G~tE~el~~ 127 (413)
.++.++++++.++..+|++||++||+.||+|++++++++..+++.++||+||.|+++
T Consensus 90 ~~~~~~i~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~~~R~iK~~~Ei~~~r~A~~i~~~a~~~~~~~i~~G~te~el~~ 169 (356)
T 1wn1_A 90 GISKGRILIEDTMRADWLIGIMKLGKFTFQPLSSLIKELRMIKDKEEVKMMEHASRIADKVFEEILTWDLIGMKERELAL 169 (356)
T ss_dssp TCSSEEEEECTTSBHHHHHHHGGGSCEEEEETHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHHHHTTSCCTTCBHHHHHH
T ss_pred cCCCCEEEEeCCcCHHHHHHHHcCCCCeEEEcHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHH
Confidence 134578899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCCCCCCceeecCCCccccccccCCcccccCcceecccccCCCCCCHHHHHhhhHHHHHhhcccccCCCc
Q psy247 128 KFDYEVRMRGAQILAYPPVVASGDNANVIHYVHNNQKCCHGDLLLMDAGFSKPGRTEHELFTKFDYEVRMRGAQILAYPP 207 (413)
Q Consensus 128 ~~~~~~~~~G~~~~~~~~iv~sG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (413)
.+++.++++ +...+ |++
T Consensus 170 ~~~~~~~~~-~~~~~--------------------------------------------------------------f~~ 186 (356)
T 1wn1_A 170 KIELLIREL-SDGIA--------------------------------------------------------------FEP 186 (356)
T ss_dssp HHHHHHHHH-SSEES--------------------------------------------------------------SCC
T ss_pred HHHHHHHHh-CcCCC--------------------------------------------------------------CCc
Confidence 999999887 65444 555
Q ss_pred eeccCCCccccccccCCccccCCCEEEEecceeeCcEEeceEEEEeecCCCCHHHHHHHHHHHHHHHHHHHhcccCCCCH
Q psy247 208 VVASGDNANVIHYVHNNQKCCHGDLLLMDAGCELNGYDSDITRTWPISGQFTDHQKVLYEIVLDTQLKLLKLCEKSDSAL 287 (413)
Q Consensus 208 ~v~~g~~~~~~h~~~~~~~i~~Gd~v~iD~g~~~~GY~aDitRT~~v~G~~~~~~~~~~~~~~~a~~~~~~~lkp~G~~~ 287 (413)
++++|.|++.+|+.|++++|++||+|++|+|++|+||++|+|||+++ |+++++|+++|+.++++++++++++|| |+++
T Consensus 187 iv~~g~n~~~~H~~~~~~~l~~gd~v~iD~g~~~~gy~sD~tRT~~v-G~~~~~~~~~~~~v~~a~~~~~~~~~p-G~~~ 264 (356)
T 1wn1_A 187 IVASGENAANPHHEPGERKIRKGDIIILDYGARWKGYCSDITRTIGL-GELDERLVKIYEVVKDAQESAFKAVRE-GIKA 264 (356)
T ss_dssp EEEEGGGGGCTTCCCCSCBCCTTCEEEEEECEEETTEECCEEEEEES-SSCCHHHHHHHHHHHHHHHHHHHHCBT-TSBH
T ss_pred EEEEecccccccCCCCCCeecCCCEEEEEEEEEECCEEeccEEEEEc-CCCCHHHHHHHHHHHHHHHHHHHHhcC-CCcH
Confidence 66666667778888889999999999999999999999999999999 999999999999999999999999999 9999
Q ss_pred HHHHHHH--HHHHcCc-ccccccccccCCCCccCCCCCCCCCCCCCCcceecCCCCccccCCCCCCCCCCCCCcEEEeCC
Q psy247 288 NFIYRYA--YVFQIGF-KFCPHHSSHYLGMDVHDCAAIPRTIPVAPGVVFTVEPGMDVHDCAAIPRTIPVAPGMVFTVEP 364 (413)
Q Consensus 288 ~ei~~~~--~~~~~g~-~~~~h~~GHgiGl~~~E~p~~~~~~~~~~g~~~~~~pg~~~~~~~~~~~~~~L~~GMv~~iEP 364 (413)
++|++++ .+.+.|+ .+++|++||+||+++||.|.+. .+++.+|+|||||+|||
T Consensus 265 ~~i~~~~~~~~~~~g~~~~~~h~~GHgiGl~~he~p~i~------------------------~~~~~~l~~Gmv~tiEP 320 (356)
T 1wn1_A 265 KDVDSRAREVISKAGYGEYFIHRTGHGLGLDVHEEPYIG------------------------PDGEVILKNGMTFTIEP 320 (356)
T ss_dssp HHHHHHHHHHHHTTTCGGGCCSCSEEECSSSSSEEEEES------------------------TTCCCBCCTTCEEEECC
T ss_pred HHHHHHHHHHHHHcCCcccCCCCCcccCCCccCCCcccC------------------------CCCCCCcCCCCEEEECC
Confidence 9999999 7788898 6889999999999999999753 23578999999999999
Q ss_pred eeeEcCCCCCcccccccceEEEceeEEEeCCCCcccCCCCCCCCcccc
Q psy247 365 GVYISKDCKETRPEFRGMGIRIEDDILIDKSSNVENLSAMCPKNIDEI 412 (413)
Q Consensus 365 gi~~~~~~~~~~~~~~~~gvriED~vlVt~~G~~e~Lt~~~p~~~~~i 412 (413)
|+|+++. +|+||||+|+||++|+ |+||. +|+++..|
T Consensus 321 giy~~g~----------~gvriEd~v~Vt~~g~-e~Lt~-~p~~l~~~ 356 (356)
T 1wn1_A 321 GIYVPGL----------GGVRIEDDIVVDEGKG-RRLTK-AERELIIL 356 (356)
T ss_dssp EEEETTT----------EEEECBEEEEEETTEE-EESCC-CCCSCCBC
T ss_pred eeEeCCC----------cEEEEeeEEEEeCCcc-EECCC-CCCcceeC
Confidence 9999876 7999999999999998 99998 79998754
No 9
>4ege_A Dipeptidase PEPE; structural genomics, seattle structural genomics center for infectious disease, ssgcid, hydrolase; 2.20A {Mycobacterium ulcerans}
Probab=100.00 E-value=8.1e-57 Score=452.38 Aligned_cols=302 Identities=21% Similarity=0.334 Sum_probs=255.0
Q ss_pred eeeeecCceEEecCCCCCC----EEEEEEcCCCCCceEEEEEeCcchhh---h----------ccCCCcccHhhHhhhcC
Q psy247 7 YIFRQNTDFFYFTGCLEPD----SAVVIHGASDENFKSELFVKRKDAKA---E----------LWDGPRTGKAQLNGYVP 69 (413)
Q Consensus 7 ~~f~q~~n~~YltG~~~~~----~~lv~~~~~~~~~~~~l~v~~~~~~~---~----------~~~~~~~~~~~~~~~l~ 69 (413)
+.+.+++|++||||+.... ++|+|+.++ +++|++++.+... + .|.......+.+.+++.
T Consensus 34 ~li~~~~ni~YltG~~~~~~~r~~~l~v~~~g----~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 109 (378)
T 4ege_A 34 LVITPGYDLRYLIGSRADTFERLTALVLPASG----VPTIVLPRLELASLKESAASDLGVCVRDWVDGDDPYQLVAVALG 109 (378)
T ss_dssp EEECSSHHHHHHHCCCCCCSSSCCEEEEESSS----CCEEEEEGGGGGGGGTSSTTTTTCEEEEECTTSCHHHHHHHHTT
T ss_pred EEECCcchhHHhhCCCCCCCcceEEEEEEeCC----cEEEEEChhhHHHHHhcccCCCCeEEEEecCCCCHHHHHHHHHh
Confidence 5667889999999997532 578888764 5789998876431 1 12211111223333332
Q ss_pred CC----------C-----------CCcccchHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHhccCCCCCHHHHHHH
Q psy247 70 RR----------K-----------DYSWNVPKQLFHQLRLYKSDSEQEMMRETCRIASEGFKETIGFSKPGRTEHELFTK 128 (413)
Q Consensus 70 ~~----------~-----------~~~~~d~~~~l~~~R~vKs~~Ei~~~r~A~~i~~~~~~~~~~~~~~G~tE~el~~~ 128 (413)
.. + +.++++++.++..+|++||++||+.||+|++++++++..+++.++||+||.|+++.
T Consensus 110 ~~~~~igve~~~~~~~~~~l~~~~~~~~~~~~~~i~~~R~iKs~~Ei~~~r~A~~i~~~a~~~~~~~i~~G~tE~el~~~ 189 (378)
T 4ege_A 110 GAPAATAVTDSMPALHLLPLADALGVLPVLATDVLRQLRMVKEAAEVDALAKAGAAIDRVHARVPAFLVPGRTEAQVAAD 189 (378)
T ss_dssp SSSCCEEECTTCCHHHHHHHHHHHTSCCEESHHHHHHHHTBCCHHHHHHHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHH
T ss_pred cCCCEEEEcCCCcHHHHHHHHHHcCCeEEEcHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHH
Confidence 10 0 46788999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCCCCceeecCCCccccccccCCcccccCcceecccccCCCCCCHHHHHhhhHHHHHhhcccccCCCce
Q psy247 129 FDYEVRMRGAQILAYPPVVASGDNANVIHYVHNNQKCCHGDLLLMDAGFSKPGRTEHELFTKFDYEVRMRGAQILAYPPV 208 (413)
Q Consensus 129 ~~~~~~~~G~~~~~~~~iv~sG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (413)
+++.++++|++..+| +|
T Consensus 190 ~~~~~~~~G~~~~~f-~i-------------------------------------------------------------- 206 (378)
T 4ege_A 190 IAEAIVAEGHSAVAF-VI-------------------------------------------------------------- 206 (378)
T ss_dssp HHHHHHHTTCSEEEE-EE--------------------------------------------------------------
T ss_pred HHHHHHHcCCCCCCe-eE--------------------------------------------------------------
Confidence 999999999875444 44
Q ss_pred eccCCCccccccccCCccccCCCEEEEecceee-CcEEeceEEEEeecCCCCHHHHHHHHHHHHHHHHHHHhcccCCCCH
Q psy247 209 VASGDNANVIHYVHNNQKCCHGDLLLMDAGCEL-NGYDSDITRTWPISGQFTDHQKVLYEIVLDTQLKLLKLCEKSDSAL 287 (413)
Q Consensus 209 v~~g~~~~~~h~~~~~~~i~~Gd~v~iD~g~~~-~GY~aDitRT~~v~G~~~~~~~~~~~~~~~a~~~~~~~lkp~G~~~ 287 (413)
+++|.|++.+|+.|++++|++||+|++|+|++| +||++|+|||+++ |+++++|+++|+.++++++++++++|| |+++
T Consensus 207 v~sG~n~~~~H~~~~~~~l~~Gd~v~iD~G~~~~~GY~sD~tRT~~v-G~~~~~~~~~~~~v~~a~~~~~~~~~p-G~~~ 284 (378)
T 4ege_A 207 VGSGPHGADPHHGYSDRKLQVGDIVVVDIGGTYEPGYYSDSTRTYSI-GDPSPDVAQQYSALQRAQRAAVDAVRP-GVTA 284 (378)
T ss_dssp EEEGGGGGCTTCCCCSCBCCTTCEEEEEEEEEETTTEECCEEEEEEE-SCCCHHHHHHHHHHHHHHHHHHHHCCT-TCBH
T ss_pred EEeeCCCCccCCCCCCCCcCCCCEEEEEEEEEECCeEEEccEEEEEe-CCCCHHHHHHHHHHHHHHHHHHHHcCC-CCcH
Confidence 455555667788888899999999999999999 9999999999999 999999999999999999999999999 9999
Q ss_pred HHHHHHH--HHHHcCc-ccccccccccCCCCccCCCCCCCCCCCCCCcceecCCCCccccCCCCCCCCCCCCCcEEEeCC
Q psy247 288 NFIYRYA--YVFQIGF-KFCPHHSSHYLGMDVHDCAAIPRTIPVAPGVVFTVEPGMDVHDCAAIPRTIPVAPGMVFTVEP 364 (413)
Q Consensus 288 ~ei~~~~--~~~~~g~-~~~~h~~GHgiGl~~~E~p~~~~~~~~~~g~~~~~~pg~~~~~~~~~~~~~~L~~GMv~~iEP 364 (413)
++|++++ .+.+.|+ .++.|++||+||+++||.|.+. .+++.+|+|||||+|||
T Consensus 285 ~~v~~~~~~~~~~~G~~~~~~h~~GHgiGl~~hE~P~i~------------------------~~~~~~L~~Gmv~tiEP 340 (378)
T 4ege_A 285 AQVDAAARDVLADAGLAEYFVHRTGHGIGLCVHEEPYIV------------------------AGNELPLVAGMAFSIEP 340 (378)
T ss_dssp HHHHHHHHHHHHHTTCGGGCCSCSEEECSSSSSEEEEEC------------------------TTCCCBCCTTBEEEECC
T ss_pred HHHHHHHHHHHHHcCCCCcCCCCCcccCCCCcCCCCccC------------------------CCCCCccCCCCEEEECC
Confidence 9999999 7788998 5789999999999999999753 23578999999999999
Q ss_pred eeeEcCCCCCcccccccceEEEceeEEEeCCCCcccCCCCCCCCccccC
Q psy247 365 GVYISKDCKETRPEFRGMGIRIEDDILIDKSSNVENLSAMCPKNIDEIE 413 (413)
Q Consensus 365 gi~~~~~~~~~~~~~~~~gvriED~vlVt~~G~~e~Lt~~~p~~~~~ie 413 (413)
++|+++. +|+||||+|+||++|+ |+||. +|+++..|+
T Consensus 341 giy~~g~----------~gvriEd~v~Vt~~G~-e~Lt~-~p~~l~~~~ 377 (378)
T 4ege_A 341 GIYFPGR----------WGARIEDIVVVTENGA-LSVNN-RPHELMVVP 377 (378)
T ss_dssp EEEETTT----------EEEECBEEEEEETTEE-EESCC-SCCSCEEEC
T ss_pred EEEeCCc----------cEEEEeeEEEEeCCcC-eECCC-CCCccEEcc
Confidence 9999876 7999999999999999 99998 799987663
No 10
>2zsg_A Aminopeptidase P, putative; hydrolase; 1.65A {Thermotoga maritima}
Probab=100.00 E-value=1.5e-56 Score=447.30 Aligned_cols=301 Identities=27% Similarity=0.437 Sum_probs=255.3
Q ss_pred eeeeecCce-----EEecCCCCCCEEEEEEcCCCCCceEEEEEeCcchhh---h-ccC---C-CcccHhhHhhhcC----
Q psy247 7 YIFRQNTDF-----FYFTGCLEPDSAVVIHGASDENFKSELFVKRKDAKA---E-LWD---G-PRTGKAQLNGYVP---- 69 (413)
Q Consensus 7 ~~f~q~~n~-----~YltG~~~~~~~lv~~~~~~~~~~~~l~v~~~~~~~---~-~~~---~-~~~~~~~~~~~l~---- 69 (413)
+.+....|+ +||||+..++++++++.+ +.+||++.+.... + .|. . .....+.+.++|+
T Consensus 19 ~li~~~~ni~~~~~~YLtGf~~~~~~llI~~~-----~~~L~~d~r~~~~a~~~~~~~v~~~~~~~~~~~l~~~L~~~~~ 93 (359)
T 2zsg_A 19 FLIMNIENSARASSVYFSGFTGSFSIILISEN-----TRLLITDSRYTVQAKQETDFEVREVKGGDFIDVLKKTVNDLKI 93 (359)
T ss_dssp EEEEESTTTTHHHHHHHHCCCSSCEEEEEETT-----EEEEEECTTTHHHHHHHCCSEEEEC---CCHHHHHHHHHHTTC
T ss_pred EEEEChhHcccccCeeEeccCCCCEEEEEECC-----CCEEEECcccHHHHHhCCCCEEEEecCcchHHHHHHHHHhcCC
Confidence 677788899 999999988899999864 5789998875321 1 010 0 0001222332221
Q ss_pred --------------------CCCCCcccchHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHhccCCCCCHHHHHHHH
Q psy247 70 --------------------RRKDYSWNVPKQLFHQLRLYKSDSEQEMMRETCRIASEGFKETIGFSKPGRTEHELFTKF 129 (413)
Q Consensus 70 --------------------~~~~~~~~d~~~~l~~~R~vKs~~Ei~~~r~A~~i~~~~~~~~~~~~~~G~tE~el~~~~ 129 (413)
.+++.+++++++++..+|++||++||+.||+|++++++++..+++.++||+||.|+++.+
T Consensus 94 ~~vgvd~~~~~~~~~~~l~~~l~~~~~v~~~~~i~~lr~iK~~~Ei~~~r~a~~~~~~~~~~~~~~~~~G~te~e~~~~~ 173 (359)
T 2zsg_A 94 KTIALEEERVSLSLFRRISSAFGDRKFIGIDDEVKQMRMVKDEGEIEKIKQAIEISERAFLETVQQIRAGMTEKEIAALL 173 (359)
T ss_dssp CEEEECGGGSBHHHHHHHHHHTTTCEEEECHHHHHHHHHBCCHHHHHHHHHHHHHHHHHHHHHHTTCCTTCBHHHHHHHH
T ss_pred CEEEEeCCcCCHHHHHHHHhhCCCcEEEEChhhhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHH
Confidence 123367889999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCCCCceeecCCCccccccccCCcccccCcceecccccCCCCCCHHHHHhhhHHHHHhhcccccCCCcee
Q psy247 130 DYEVRMRGAQILAYPPVVASGDNANVIHYVHNNQKCCHGDLLLMDAGFSKPGRTEHELFTKFDYEVRMRGAQILAYPPVV 209 (413)
Q Consensus 130 ~~~~~~~G~~~~~~~~iv~sG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 209 (413)
++.++++|+...+ |++++
T Consensus 174 ~~~~~~~g~~~~~--------------------------------------------------------------f~~iv 191 (359)
T 2zsg_A 174 EYTMRKEGAEGVA--------------------------------------------------------------FDTIV 191 (359)
T ss_dssp HHHHHHTTCSEES--------------------------------------------------------------SCCEE
T ss_pred HHHHHHcCCCCCC--------------------------------------------------------------CCCEE
Confidence 9999999876544 45555
Q ss_pred ccCCCccccccccCCccccCCCEEEEecceeeCcEEeceEEEEeecCCCCHHHHHHHHHHHHHHHHHHHhcccCCCCHHH
Q psy247 210 ASGDNANVIHYVHNNQKCCHGDLLLMDAGCELNGYDSDITRTWPISGQFTDHQKVLYEIVLDTQLKLLKLCEKSDSALNF 289 (413)
Q Consensus 210 ~~g~~~~~~h~~~~~~~i~~Gd~v~iD~g~~~~GY~aDitRT~~v~G~~~~~~~~~~~~~~~a~~~~~~~lkp~G~~~~e 289 (413)
++|.|++++|+.|++++|++||+|++|+|++|+||++|+|||+++ |+|+++|+++|+.++++++++++++|| |+++++
T Consensus 192 ~~g~~~~~~h~~~~~~~l~~gd~v~iD~g~~~~gy~~D~tRt~~~-G~~~~~~~~~~~~v~~~~~~~~~~~~p-G~~~~~ 269 (359)
T 2zsg_A 192 ASGCRSALPHGKASDKVVERGDVIVIDFGATYENYCADITRVVSI-GEPSDEVKEVHSIVLEAQERALKIAKA-GVTGKL 269 (359)
T ss_dssp EEGGGGGSTTCCCCSCBCCTTCEEEEEECEEETTEECCEEEEEES-SSCCHHHHHHHHHHHHHHHHHHHHCCT-TCBHHH
T ss_pred EEccccccccCCCCCcccCCCCEEEEEEeEEECCEEEeeeEEEEc-CCCCHHHHHHHHHHHHHHHHHHHHccC-CCCHHH
Confidence 666666778888888999999999999999999999999999999 999999999999999999999999999 999999
Q ss_pred HHHHH--HHHHcCc-ccccccccccCCCCccCCCCCCCCCCCCCCcceecCCCCccccCCCCCCCCCCCCCcEEEeCCee
Q psy247 290 IYRYA--YVFQIGF-KFCPHHSSHYLGMDVHDCAAIPRTIPVAPGVVFTVEPGMDVHDCAAIPRTIPVAPGMVFTVEPGV 366 (413)
Q Consensus 290 i~~~~--~~~~~g~-~~~~h~~GHgiGl~~~E~p~~~~~~~~~~g~~~~~~pg~~~~~~~~~~~~~~L~~GMv~~iEPgi 366 (413)
|++++ .+.+.|+ .+++|++||+||+++||.|.+. .+++.+|+|||||+||||+
T Consensus 270 v~~~~~~~~~~~g~~~~~~h~~GHgiGl~~he~p~i~------------------------~~~~~~l~~gmv~tiEPgi 325 (359)
T 2zsg_A 270 LDSVAREFIREKGYGEFFGHSLGHGIGLEVHEGPAIS------------------------FRNDSPLPENVVFTVEPGI 325 (359)
T ss_dssp HHHHHHHHHHHTTCGGGBCSCSEEECSSSSSEEEEES------------------------TTCCCBCCTTBEEEECCEE
T ss_pred HHHHHHHHHHHcCCcccCCCCCccccCcccCCCCCcC------------------------CCCCCCcCCCCEEEECCEE
Confidence 99999 7788898 5889999999999999999753 2357899999999999999
Q ss_pred eEcCCCCCcccccccceEEEceeEEEeCCCCcccCCCCCCCCcccc
Q psy247 367 YISKDCKETRPEFRGMGIRIEDDILIDKSSNVENLSAMCPKNIDEI 412 (413)
Q Consensus 367 ~~~~~~~~~~~~~~~~gvriED~vlVt~~G~~e~Lt~~~p~~~~~i 412 (413)
|+++. +|+||||+|+||++|+ |+||. +|+++..|
T Consensus 326 y~~~~----------~gvriEd~v~vt~~g~-e~Lt~-~~~~l~~~ 359 (359)
T 2zsg_A 326 YLEGK----------FGIRIEEDVVLKEQGC-EILTT-LPRSIFVV 359 (359)
T ss_dssp EETTT----------EEEECBEEEEEETTEE-EECCC-SCCSCEEC
T ss_pred EECCC----------cEEEEeeEEEEcCCcc-eECCC-CCccceeC
Confidence 99876 7999999999999998 99997 79998654
No 11
>1wy2_A XAA-Pro dipeptidase; structural genomics, prolidase, riken structural genomics/PR initiative, RSGI, hydrolase; 1.70A {Pyrococcus horikoshii} PDB: 1pv9_A
Probab=100.00 E-value=1.6e-55 Score=438.91 Aligned_cols=297 Identities=26% Similarity=0.437 Sum_probs=247.6
Q ss_pred eeeeecCceEEecCCCCCCE-E-EEEEcCCCCCceEEEEEeCcchhh-hccCCCc---ccHhhHhhhcC-----------
Q psy247 7 YIFRQNTDFFYFTGCLEPDS-A-VVIHGASDENFKSELFVKRKDAKA-ELWDGPR---TGKAQLNGYVP----------- 69 (413)
Q Consensus 7 ~~f~q~~n~~YltG~~~~~~-~-lv~~~~~~~~~~~~l~v~~~~~~~-~~~~~~~---~~~~~~~~~l~----------- 69 (413)
+.+.+.+|++||||+..+++ + ++++.+ +..+|+.++...+ +.+.... ...+.+.++++
T Consensus 23 ~li~~~~n~~yltg~~~~~~~~~llv~~~-----~~~l~~~~~~~~~~~~~~~~v~~~~~~~~l~~~l~~~~~ig~e~~~ 97 (351)
T 1wy2_A 23 VLIAKNPNVYYISGASPLAGGYILITGES-----ATLYVPELEYEMAKEESNIPVEKFKKMDEFYKALEGIKSLGIESSL 97 (351)
T ss_dssp EEECSHHHHHHHHSCCCSSCCEEEEETTE-----EEEEEEHHHHHHHHHHCSSCEEEESSHHHHHHHHTTCSEEEECTTC
T ss_pred EEECCCCCceEecCCCCCCCcEEEEEECC-----CcEEEECchHHHHhhcCCCeEEEeCcHHHHHHHHccCCEEEEcCcC
Confidence 66778889999999987765 5 666653 3566665543211 1110000 01223332221
Q ss_pred ----------CCCCCcccchHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHhccCCCCCHHHHHHHHHHHHHHcCCC
Q psy247 70 ----------RRKDYSWNVPKQLFHQLRLYKSDSEQEMMRETCRIASEGFKETIGFSKPGRTEHELFTKFDYEVRMRGAQ 139 (413)
Q Consensus 70 ----------~~~~~~~~d~~~~l~~~R~vKs~~Ei~~~r~A~~i~~~~~~~~~~~~~~G~tE~el~~~~~~~~~~~G~~ 139 (413)
.++..++++++.++..+|++||++||+.||+|++++++++..+++.++||+||.|+++.+++.++++|++
T Consensus 98 ~~~~~~~l~~~~~~~~~~~~~~~i~~~r~iK~~~Ei~~~r~A~~i~~~a~~~~~~~i~~G~te~el~~~~~~~~~~~g~~ 177 (351)
T 1wy2_A 98 PYGFIEELKKKANIKEFKKVDDVIRDMRIIKSEKEIKIIEKACEIADKAVMAAIEEITEGKKEREVAAKVEYLMKMNGAE 177 (351)
T ss_dssp BHHHHHHHHHHSCCCEEEECHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHHTTCS
T ss_pred CHHHHHHHHhhCCCCeEEEcHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHcCCC
Confidence 1243478999999999999999999999999999999999999999999999999999999999998876
Q ss_pred CCCCCceeecCCCccccccccCCcccccCcceecccccCCCCCCHHHHHhhhHHHHHhhcccccCCCceeccCCCccccc
Q psy247 140 ILAYPPVVASGDNANVIHYVHNNQKCCHGDLLLMDAGFSKPGRTEHELFTKFDYEVRMRGAQILAYPPVVASGDNANVIH 219 (413)
Q Consensus 140 ~~~~~~iv~sG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g~~~~~~h 219 (413)
..+ |++++++|.|++.+|
T Consensus 178 ~~~--------------------------------------------------------------f~~iv~~g~n~~~~H 195 (351)
T 1wy2_A 178 KPA--------------------------------------------------------------FDTIIASGYRSALPH 195 (351)
T ss_dssp EES--------------------------------------------------------------SCCEEEEGGGGGSTT
T ss_pred CCC--------------------------------------------------------------CCCEEEEcccccccc
Confidence 444 555566666677788
Q ss_pred cccCCccccCCCEEEEecceeeCcEEeceEEEEeecCCCCHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHH--HHH
Q psy247 220 YVHNNQKCCHGDLLLMDAGCELNGYDSDITRTWPISGQFTDHQKVLYEIVLDTQLKLLKLCEKSDSALNFIYRYA--YVF 297 (413)
Q Consensus 220 ~~~~~~~i~~Gd~v~iD~g~~~~GY~aDitRT~~v~G~~~~~~~~~~~~~~~a~~~~~~~lkp~G~~~~ei~~~~--~~~ 297 (413)
+.|++++|++||+|++|+|++|+||++|+|||+++ |+|+++|+++|+.++++++++++++|| |+++++|++++ .+.
T Consensus 196 ~~~~~~~l~~gd~v~iD~G~~~~gy~sD~tRT~~v-G~~~~~~~~~~~~v~~a~~~~~~~~~p-G~~~~~v~~~~~~~~~ 273 (351)
T 1wy2_A 196 GVASDKRIERGDLVVIDLGALYQHYNSDITRTIVV-GSPNEKQKEIYEIVLEAQKKAVESAKP-GITAKELDSIARNIIA 273 (351)
T ss_dssp CBCCSCBCCTTCEEEEEECEEETTEECCEEEEEES-SCCCHHHHHHHHHHHHHHHHHHHHCCT-TCBHHHHHHHHHHHHH
T ss_pred CCCCCcccCCCCEEEEEEEEEECCEEecceEEEEc-CCCCHHHHHHHHHHHHHHHHHHHHcCC-CCcHHHHHHHHHHHHH
Confidence 88889999999999999999999999999999999 999999999999999999999999999 99999999999 778
Q ss_pred HcCc-ccccccccccCCCCccCCCCCCCCCCCCCCcceecCCCCccccCCCCCCCCCCCCCcEEEeCCeeeEcCCCCCcc
Q psy247 298 QIGF-KFCPHHSSHYLGMDVHDCAAIPRTIPVAPGVVFTVEPGMDVHDCAAIPRTIPVAPGMVFTVEPGVYISKDCKETR 376 (413)
Q Consensus 298 ~~g~-~~~~h~~GHgiGl~~~E~p~~~~~~~~~~g~~~~~~pg~~~~~~~~~~~~~~L~~GMv~~iEPgi~~~~~~~~~~ 376 (413)
+.|+ .+++|++||+||+++||.|.+. .+++.+|+|||||+||||+|+++.
T Consensus 274 ~~g~~~~~~h~~GHgiGl~~hE~p~i~------------------------~~~~~~l~~Gmv~tiEPgiy~~g~----- 324 (351)
T 1wy2_A 274 EYGYGEYFNHSLGHGVGLEVHEWPRVS------------------------QYDETVLREGMVITIEPGIYIPKI----- 324 (351)
T ss_dssp HTTCGGGCCSCSEEECSSSSSEEEEES------------------------TTCCCBCCTTCEEEECCEEEETTT-----
T ss_pred HcCCcccCCCCcccccCCCcCCCCccC------------------------CCCCCCcCCCCEEEECCEEEeCCC-----
Confidence 8888 6789999999999999998753 235789999999999999999876
Q ss_pred cccccceEEEceeEEEeCCCCcc-cCCCCCCCCc
Q psy247 377 PEFRGMGIRIEDDILIDKSSNVE-NLSAMCPKNI 409 (413)
Q Consensus 377 ~~~~~~gvriED~vlVt~~G~~e-~Lt~~~p~~~ 409 (413)
+|+||||+|+|| +|+ | +||. +|+++
T Consensus 325 -----~gvriEd~v~Vt-~G~-e~~Lt~-~p~~l 350 (351)
T 1wy2_A 325 -----GGVRIEDTILIT-KNG-SKRLTK-TEREL 350 (351)
T ss_dssp -----EEEECBEEEEEE-TTE-EEESCC-SCSCC
T ss_pred -----CeEEEeeEEEEC-CCc-eecCCC-CCccc
Confidence 799999999999 998 9 9997 79986
No 12
>3tb5_A Methionine aminopeptidase; hydrolase, metalloprotease, enter feacalis; HET: CIT; 2.30A {Enterococcus faecalis}
Probab=100.00 E-value=1.8e-55 Score=421.93 Aligned_cols=247 Identities=21% Similarity=0.246 Sum_probs=223.6
Q ss_pred HHccCCHHHHHHHHHHHHHHHHHHHHHHhccCCCCCHHHHHHHHHHHHHHcCCCCCCCCceeecCCCccccccccCCccc
Q psy247 86 LRLYKSDSEQEMMRETCRIASEGFKETIGFSKPGRTEHELFTKFDYEVRMRGAQILAYPPVVASGDNANVIHYVHNNQKC 165 (413)
Q Consensus 86 ~R~vKs~~Ei~~~r~A~~i~~~~~~~~~~~~~~G~tE~el~~~~~~~~~~~G~~~~~~~~iv~sG~~~~~~~~~~~~~~~ 165 (413)
||+|||++||++||+|++++++++..+++.++||+||.||++.+++.++++|+....+
T Consensus 1 M~~IKs~~EI~~mr~A~~i~~~a~~~~~~~ikpG~tE~el~~~~~~~~~~~G~~~~~~---------------------- 58 (264)
T 3tb5_A 1 MITLKSPREIEMMDESGELLADVHRHLRTFIKPGITSWDIEVFVRDFIESHGGVAAQI---------------------- 58 (264)
T ss_dssp CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHHTTCEETTT----------------------
T ss_pred CCCcCCHHHHHHHHHHHHHHHHHHHHHHHhCcCCCCHHHHHHHHHHHHHHcCCCcccc----------------------
Confidence 5899999999999999999999999999999999999999999999999999763211
Q ss_pred ccCcceecccccCCCCCCHHHHHhhhHHHHHhhcccccCCCceeccCCCccccccccCCccccCCCEEEEecceeeCcEE
Q psy247 166 CHGDLLLMDAGFSKPGRTEHELFTKFDYEVRMRGAQILAYPPVVASGDNANVIHYVHNNQKCCHGDLLLMDAGCELNGYD 245 (413)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g~~~~~~h~~~~~~~i~~Gd~v~iD~g~~~~GY~ 245 (413)
.+.+|++++++|.|++.+|+.|++++|++||+|++|+|+.|+||+
T Consensus 59 -----------------------------------~~~~~~~~v~~g~~~~~~H~~~~~~~l~~Gdlv~iD~g~~~~GY~ 103 (264)
T 3tb5_A 59 -----------------------------------GYEGYKYATCCSINDEICHGFPRKKVLKDGDLIKVDMCVDLKGAI 103 (264)
T ss_dssp -----------------------------------TGGGCCCSEEEEETTEEECCCCCSCBCCTTCEEEEEEEEEETTEE
T ss_pred -----------------------------------cccCCCcceEECCcccccCCCCCCccccCCCEEEEeccceeccee
Confidence 124688999999999999999999999999999999999999999
Q ss_pred eceEEEEeecCCCCHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHH--HHHHcCcccccccccccCCCCccCCCCCC
Q psy247 246 SDITRTWPISGQFTDHQKVLYEIVLDTQLKLLKLCEKSDSALNFIYRYA--YVFQIGFKFCPHHSSHYLGMDVHDCAAIP 323 (413)
Q Consensus 246 aDitRT~~v~G~~~~~~~~~~~~~~~a~~~~~~~lkp~G~~~~ei~~~~--~~~~~g~~~~~h~~GHgiGl~~~E~p~~~ 323 (413)
+|+||||++ |+++++|+++|++++++++++++++|| |++++||++++ .+.+.|+..+.|++||++|+.+||.|.+.
T Consensus 104 sD~tRT~~v-G~~~~~~~~l~~~v~~a~~~~i~~~kp-G~~~~di~~a~~~~~~~~g~~~~~~~~GHgiG~~~~e~p~i~ 181 (264)
T 3tb5_A 104 SDSCWSYVV-GESTPEIDRLMEVTKKALYLGIEQAQV-GNRIGDIGHAIQTYVEGEGYGVVRDFVGHGIGPTIHESPMIP 181 (264)
T ss_dssp EEEEEEEEC-SSCCHHHHHHHHHHHHHHHHHHHTCCT-TCBHHHHHHHHHHHHHHTTCEECCSCCEEECSSSSSEEEEEC
T ss_pred eeccccccc-CCccHHHHHHHHHHHHHHHHHHhhhCC-CCCHHHHHHHHHHHHHHcCCceeeeceecCCCCCCccCCccC
Confidence 999999999 999999999999999999999999999 99999999998 67788998889999999999999999865
Q ss_pred CCCCCCCCcceecCCCCccccCCCCCCCCCCCCCcEEEeCCeeeEcC-------CCCCcccccccceEEEceeEEEeCCC
Q psy247 324 RTIPVAPGVVFTVEPGMDVHDCAAIPRTIPVAPGMVFTVEPGVYISK-------DCKETRPEFRGMGIRIEDDILIDKSS 396 (413)
Q Consensus 324 ~~~~~~~g~~~~~~pg~~~~~~~~~~~~~~L~~GMv~~iEPgi~~~~-------~~~~~~~~~~~~gvriED~vlVt~~G 396 (413)
.+.. .+.+.+|+|||||||||++|++. ++|.+.++++++|+||||+|+||++|
T Consensus 182 ~~~~--------------------~~~~~~L~~Gmv~tiEPgiy~~~~~~~~~~d~wt~~~~~g~~gvriEd~vlVT~~G 241 (264)
T 3tb5_A 182 HYGE--------------------AGKGLRLKEGMVITIEPMVNTGTWRMKMDPNGWTAYTEDGGLSCQYEHSLAITKEG 241 (264)
T ss_dssp SSCC--------------------TTCSCBCCTTCEEEECCEEESSCSCEEECTTSSCEEETTCCCEEECCEEEECCTTC
T ss_pred cccc--------------------CCCCCCccCCcEEEEeeeEEcCCCceEEcCCCCeEEecCCccEEEeceEEEEcCCc
Confidence 3211 23567999999999999999764 46888888999999999999999999
Q ss_pred CcccCCCCCCCCccccC
Q psy247 397 NVENLSAMCPKNIDEIE 413 (413)
Q Consensus 397 ~~e~Lt~~~p~~~~~ie 413 (413)
+ |+||+ .|+++.+||
T Consensus 242 ~-e~LT~-~p~el~~ie 256 (264)
T 3tb5_A 242 P-RILTS-QGEELTYLE 256 (264)
T ss_dssp C-EETTC-CSSTTCC--
T ss_pred C-EECCC-CCcchhhhh
Confidence 9 99999 699999987
No 13
>3cb6_A FACT complex subunit SPT16; peptidase homology domain, histone binding module, histone H chaperone, PITA-bread fold; 1.84A {Schizosaccharomyces pombe} PDB: 3cb5_A
Probab=100.00 E-value=2e-54 Score=443.75 Aligned_cols=321 Identities=13% Similarity=0.205 Sum_probs=253.3
Q ss_pred ceeeeecCc-eEEecCCCCCCEEEEEEcCCCCCceEEEEEeCcchh-hhccC-CCc-------c-----------cHhhH
Q psy247 6 PYIFRQNTD-FFYFTGCLEPDSAVVIHGASDENFKSELFVKRKDAK-AELWD-GPR-------T-----------GKAQL 64 (413)
Q Consensus 6 ~~~f~q~~n-~~YltG~~~~~~~lv~~~~~~~~~~~~l~v~~~~~~-~~~~~-~~~-------~-----------~~~~~ 64 (413)
+++|+|+++ |+||||+..|+++++++.+ +.+||++.++.. .+.|. +.. . .++.+
T Consensus 50 ~~~y~q~~~~~~yLtG~~~~~~~lvi~~~-----~~~l~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 124 (444)
T 3cb6_A 50 TNPYQKSTALHTWLLGYEFPSTLILLEKH-----RITILTSVNKANMLTKLAETKGAAADVNILKRTKDAEENKKLFEKI 124 (444)
T ss_dssp TCCCCHHHHHHHHHHSSCCSSEEEEEETT-----EEEEEEEHHHHTTTHHHHTCTTCSSEEEEEEECSCHHHHHHHHHHH
T ss_pred CCCcccchhhhHHHhCCCCCCEEEEEeCC-----cEEEEEcCchHHHHhhhhccccCCccEEEEecccccccCHHHHHHH
Confidence 468999987 9999999999999999864 588899775321 11221 100 0 01222
Q ss_pred hhhcCC------------------------C----CCCcccchHHHHHHHHccCCHHHHHHHHHHHHHHHHHHH-HHH--
Q psy247 65 NGYVPR------------------------R----KDYSWNVPKQLFHQLRLYKSDSEQEMMRETCRIASEGFK-ETI-- 113 (413)
Q Consensus 65 ~~~l~~------------------------~----~~~~~~d~~~~l~~~R~vKs~~Ei~~~r~A~~i~~~~~~-~~~-- 113 (413)
.+.+.. + ++.+++++++++..+|++||++||+.||+|++++++++. .+.
T Consensus 125 ~~~l~~~~~~ig~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~i~~~r~iK~~~Ei~~~r~A~~i~~~a~~~~~~~~ 204 (444)
T 3cb6_A 125 IEYIRATNKKVGVFPKDKTQGKFINEWDSIFEPVKSEFNLVDASLGLAKCLAIKDEQELANIKGASRVSVAVMSKYFVDE 204 (444)
T ss_dssp HHHHHTTTSEEEECTTCCCCSHHHHHHHHHHTTTGGGSEEEECHHHHHHHHHSCCHHHHHHHHHHHHHHHHHHHHTHHHH
T ss_pred HHHHHhcCCEEEEeccccchhHHHHHHHHHHhhccCCceEeecHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 221110 0 235678899999999999999999999999999999999 554
Q ss_pred --hccCCC--CCHHHHHHHHHHHHHHcCCCC---C---CCCceeecCCCccccccccCCcccccCcceecccccCCCCCC
Q psy247 114 --GFSKPG--RTEHELFTKFDYEVRMRGAQI---L---AYPPVVASGDNANVIHYVHNNQKCCHGDLLLMDAGFSKPGRT 183 (413)
Q Consensus 114 --~~~~~G--~tE~el~~~~~~~~~~~G~~~---~---~~~~iv~sG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (413)
+.++|| +||.||++.+++.+++.|... . .|.
T Consensus 205 ~~~~i~~G~~~te~el~~~~~~~~~~~~~~~g~~~ga~~~~--------------------------------------- 245 (444)
T 3cb6_A 205 LSTYIDQGKKITHSKFSDQMESLIDNEAFFQTKSLKLGDID--------------------------------------- 245 (444)
T ss_dssp HHHHHHHTCCCBHHHHHHHHHGGGGCHHHHTCGGGCCTTCC---------------------------------------
T ss_pred HHHHhccccccCHHHHHHHHHHHHHHhcccccccccccccc---------------------------------------
Confidence 678899 999999999998876532110 0 000
Q ss_pred HHHHHhhhHHHHHhhcccccCCCceeccCCCcc-ccccccCCccccCCCEEEEecceeeCcEEeceEEEEeecCCCCHHH
Q psy247 184 EHELFTKFDYEVRMRGAQILAYPPVVASGDNAN-VIHYVHNNQKCCHGDLLLMDAGCELNGYDSDITRTWPISGQFTDHQ 262 (413)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~g~~~~-~~h~~~~~~~i~~Gd~v~iD~g~~~~GY~aDitRT~~v~G~~~~~~ 262 (413)
....+.+|++++++|.|++ .+|+.|++++|+ ||+|++|+|++|+||++|+|||+++ | ++++|
T Consensus 246 --------------~~~~~~~f~~iv~~g~n~~~~~H~~~~~~~l~-gd~v~iD~g~~~~gy~sD~tRT~~v-~-~~~~~ 308 (444)
T 3cb6_A 246 --------------LDQLEWCYTPIIQSGGSYDLKPSAITDDRNLH-GDVVLCSLGFRYKSYCSNVGRTYLF-D-PDSEQ 308 (444)
T ss_dssp --------------GGGEEESSCCEEECTTCCCCSTTCCCCSSBCC-SSEEEEEECEEETTEECCEEEEEEE-S-CCHHH
T ss_pred --------------ccccccccCceEeccCCcCceeccCCCCCccc-CCEEEEEEeEeeCCEeeeeeEEEEe-c-CCHHH
Confidence 0012457899999999988 999999999998 9999999999999999999999999 6 89999
Q ss_pred HHHHHHHHHHHHHHHHhcccCCCCHHHHHHHH--HHHHc--Cc-ccccccccccCCCCccCCCCCCCCCCCCCCcceecC
Q psy247 263 KVLYEIVLDTQLKLLKLCEKSDSALNFIYRYA--YVFQI--GF-KFCPHHSSHYLGMDVHDCAAIPRTIPVAPGVVFTVE 337 (413)
Q Consensus 263 ~~~~~~~~~a~~~~~~~lkp~G~~~~ei~~~~--~~~~~--g~-~~~~h~~GHgiGl~~~E~p~~~~~~~~~~g~~~~~~ 337 (413)
+++|+.++++++++++++|| |+++++|++++ .+.+. |+ .+++|++||+||+++||.|.+..
T Consensus 309 ~~~y~~v~~a~~~~~~~~~p-G~~~~~v~~~~~~~~~~~~~g~~~~~~h~~GHgiGl~~he~p~~~~------------- 374 (444)
T 3cb6_A 309 QKNYSFLVALQKKLFEYCRD-GAVIGDIYTKILGLIRAKRPDLEPNFVRNLGAGIGIEFRESSLLVN------------- 374 (444)
T ss_dssp HHHHHHHHHHHHHHHHHCST-TCBHHHHHHHHHHHHHHHCGGGGGGBCSCCEEECSSSSCBGGGCCS-------------
T ss_pred HHHHHHHHHHHHHHHHHcCC-CCcHHHHHHHHHHHHHhhhhhhHhhcccccccccCccccCCccccC-------------
Confidence 99999999999999999999 99999999999 66666 56 57899999999999999874321
Q ss_pred CCCccccCCCCCCCCCCCCCcEEEeCCeeeEcCCCCCcccccccceEEEceeEEEeCCCCcccCCCCCCCCccccC
Q psy247 338 PGMDVHDCAAIPRTIPVAPGMVFTVEPGVYISKDCKETRPEFRGMGIRIEDDILIDKSSNVENLSAMCPKNIDEIE 413 (413)
Q Consensus 338 pg~~~~~~~~~~~~~~L~~GMv~~iEPgi~~~~~~~~~~~~~~~~gvriED~vlVt~~G~~e~Lt~~~p~~~~~ie 413 (413)
.+++.+|+||||||||||+|+......++++.+.+|+||||+|+||++|+ |+||. +|+++.+||
T Consensus 375 ----------~~~~~~l~~Gmv~tiEPgiy~~~~~~~~~~~~~~~gvriEd~v~vt~~g~-e~Lt~-~p~~l~~Ie 438 (444)
T 3cb6_A 375 ----------AKNPRVLQAGMTLNLSIGFGNLINPHPKNSQSKEYALLLIDTIQITRSDP-IVFTD-SPKAQGDIS 438 (444)
T ss_dssp ----------TTCCCBCCTTCEEEEEEEEEEEECSSCCTTSCSEEEEEEEEEEECCSSSC-EETTC-CCCSHHHHE
T ss_pred ----------CCCCcccCCCCEEEEEeccccccCcccccccCCceEEEEEEEEEECCCCc-eeccc-CCCcHHHHH
Confidence 23578999999999999999431111244445568999999999999999 99997 899998886
No 14
>3mx6_A Methionine aminopeptidase; seattle structural genomics center for infectious disease, S aminopeptidase, protease, epidermic typhus; 1.70A {Rickettsia prowazekii} PDB: 3mr1_A
Probab=100.00 E-value=1e-52 Score=402.46 Aligned_cols=245 Identities=20% Similarity=0.251 Sum_probs=219.7
Q ss_pred HHHccCCHHHHHHHHHHHHHHHHHHHHHHhccCCCCCHHHHHHHHHHHHHHcCCCCCCCCceeecCCCccccccccCCcc
Q psy247 85 QLRLYKSDSEQEMMRETCRIASEGFKETIGFSKPGRTEHELFTKFDYEVRMRGAQILAYPPVVASGDNANVIHYVHNNQK 164 (413)
Q Consensus 85 ~~R~vKs~~Ei~~~r~A~~i~~~~~~~~~~~~~~G~tE~el~~~~~~~~~~~G~~~~~~~~iv~sG~~~~~~~~~~~~~~ 164 (413)
.++++||++||++||+|++++++++..+++.++||+||.||++.+++.++++|+... +.
T Consensus 4 ~~~~iKs~~Ei~~~r~A~~i~~~~~~~~~~~i~pG~tE~el~~~~~~~~~~~G~~~~-~~-------------------- 62 (262)
T 3mx6_A 4 SMIKIHTEKDFIKMRAAGKLAAETLDFITDHVKPNVTTNSLNDLCHNFITSHNAIPA-PL-------------------- 62 (262)
T ss_dssp --CCCCCHHHHHHHHHHHHHHHHHHHHHGGGCCTTCBHHHHHHHHHHHHHHTTCEET-TT--------------------
T ss_pred CcceeCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCccc-cc--------------------
Confidence 478999999999999999999999999999999999999999999999999887521 00
Q ss_pred cccCcceecccccCCCCCCHHHHHhhhHHHHHhhcccccCCCceeccCCCccccccccCCccccCCCEEEEecceeeCcE
Q psy247 165 CCHGDLLLMDAGFSKPGRTEHELFTKFDYEVRMRGAQILAYPPVVASGDNANVIHYVHNNQKCCHGDLLLMDAGCELNGY 244 (413)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g~~~~~~h~~~~~~~i~~Gd~v~iD~g~~~~GY 244 (413)
.+.+|++++++|.|++++|+.|++++|++||+|++|+|+.|+||
T Consensus 63 ------------------------------------~~~~f~~iv~~g~n~~~~H~~p~~~~l~~Gd~v~iD~G~~~~GY 106 (262)
T 3mx6_A 63 ------------------------------------NYKGFPKSICTSINHVVCHGIPNDKPLKNGDIVNIDVTVILDGW 106 (262)
T ss_dssp ------------------------------------TGGGCCSSSEEEETTEEECCCCCSCBCCTTCEEEEEEEEEETTE
T ss_pred ------------------------------------ccCCCCcceEecccccccCCCCCCcccCCCCEEEEEeeEEECCE
Confidence 12468899999999999999999999999999999999999999
Q ss_pred EeceEEEEeecCCCCHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHH--HHHHcCcccccccccccCCCCccCCCCC
Q psy247 245 DSDITRTWPISGQFTDHQKVLYEIVLDTQLKLLKLCEKSDSALNFIYRYA--YVFQIGFKFCPHHSSHYLGMDVHDCAAI 322 (413)
Q Consensus 245 ~aDitRT~~v~G~~~~~~~~~~~~~~~a~~~~~~~lkp~G~~~~ei~~~~--~~~~~g~~~~~h~~GHgiGl~~~E~p~~ 322 (413)
++|+||||++ |+++++|+++|++++++++++++++|| |++++||++++ .+.+.|+..+.|++||+||+++||.|.+
T Consensus 107 ~sD~tRT~~v-G~~~~~~~~~~~~v~~a~~~~i~~~kp-G~~~~~i~~~~~~~~~~~G~~~~~~~~GHgiG~~~hE~p~i 184 (262)
T 3mx6_A 107 YGDTSRMYYV-GDVAIKPKRLIQVTYDAMMKGIEVVRP-GAKLGDIGYAIQSYAEKHNYSVVRDYTGHGIGRVFHDKPSI 184 (262)
T ss_dssp EEEEEEEEEC-SSCCHHHHHHHHHHHHHHHHHHHTCST-TCBHHHHHHHHHHHHHHTTCEECCSCCEEECSSSSSEEEEE
T ss_pred EEEEEEEEEc-CCCCHHHHHHHHHHHHHHHHHHHHhcC-CCcHHHHHHHHHHHHHHcCCccCCCccccccCCcccCCCcc
Confidence 9999999999 999999999999999999999999999 99999999999 7778898767899999999999999976
Q ss_pred CCCCCCCCCcceecCCCCccccCCCCCCCCCCCCCcEEEeCCeeeE--------cCCCCCcccccccceEEEceeEEEeC
Q psy247 323 PRTIPVAPGVVFTVEPGMDVHDCAAIPRTIPVAPGMVFTVEPGVYI--------SKDCKETRPEFRGMGIRIEDDILIDK 394 (413)
Q Consensus 323 ~~~~~~~~g~~~~~~pg~~~~~~~~~~~~~~L~~GMv~~iEPgi~~--------~~~~~~~~~~~~~~gvriED~vlVt~ 394 (413)
+++.. .+++.+|++||||+|||++|+ ..++|.+.++++++|+|+||||+||+
T Consensus 185 ~~~~~--------------------~~~~~~L~~Gmv~tiEPgiy~g~~gvri~~~d~w~~~~~~~~~~~~~Ed~v~Vt~ 244 (262)
T 3mx6_A 185 LNYGR--------------------NGTGLTLKEGMFFTVEPMINAGNYDTILSKLDGWTVTTRDKSLSAQFEHTIGVTK 244 (262)
T ss_dssp CSSCC--------------------TTCSCBCCTTCEEEECCEEESSCSCEEECTTTSCCEEETTCCCEEECBEEEEECS
T ss_pred cccCC--------------------CCCCCEeCCCCEEEEeCEEEcCCCeEEEecCCCceEEecCCCceeeeceEEEECC
Confidence 53210 245789999999999999996 34567888888999999999999999
Q ss_pred CCCcccCCCCCCCCcc
Q psy247 395 SSNVENLSAMCPKNID 410 (413)
Q Consensus 395 ~G~~e~Lt~~~p~~~~ 410 (413)
+|+ |+||. .|+++.
T Consensus 245 ~G~-e~LT~-~p~~l~ 258 (262)
T 3mx6_A 245 DGF-EIFTL-SPKKLD 258 (262)
T ss_dssp SSE-EESCC-CTTCCC
T ss_pred CcC-eECCC-CCcccC
Confidence 999 99998 699985
No 15
>3biq_A FACT complex subunit SPT16; PITA-bread, aminopeptidase, chromatin, replication, AC chromosomal protein, DNA damage, DNA repair; 1.73A {Saccharomyces cerevisiae} PDB: 3bip_A 3bit_A*
Probab=100.00 E-value=1.1e-52 Score=433.64 Aligned_cols=323 Identities=14% Similarity=0.163 Sum_probs=251.8
Q ss_pred cceeeeecCceEEecCCCCCCEEEEEEcCCCCCceEEEEEeCcch----hh----hccC-C-C-----c---------cc
Q psy247 5 IPYIFRQNTDFFYFTGCLEPDSAVVIHGASDENFKSELFVKRKDA----KA----ELWD-G-P-----R---------TG 60 (413)
Q Consensus 5 ~~~~f~q~~n~~YltG~~~~~~~lv~~~~~~~~~~~~l~v~~~~~----~~----~~~~-~-~-----~---------~~ 60 (413)
..|+ +|++.+.|||||..|.++++|+.+ +++||++.++. .. ++|. + . . ..
T Consensus 45 ~~y~-~~~~~~~yLtGf~~~~~~lvVt~d-----~~~L~~d~~~~~y~~~a~~~~e~~~~~~~v~v~~~~~~~~~~~~~~ 118 (467)
T 3biq_A 45 NPYQ-KTTILHNWLLSYEFPATLIALVPG-----KVIIITSSAKAKHLQKAIDLFKDPESKITLELWQRNNKEPELNKKL 118 (467)
T ss_dssp STTC-HHHHHHHHHHSSCCSSEEEEEETT-----EEEEEEEHHHHHHHHHHHGGGCC--CCCEEEEEEECTTCHHHHHHH
T ss_pred CCCc-cchhhhhHhhCCCCCCEEEEEECC-----eEEEEECCcchHHHHHHhhhcccccCCCCeEEEEecccccccchhh
Confidence 3344 555555799999989999999865 58999998752 11 1231 1 0 0 01
Q ss_pred HhhHhhhcCC------------------------C------CCCcccchHHHHHHHHccCCHHHHHHHHHHHHHHHHHHH
Q psy247 61 KAQLNGYVPR------------------------R------KDYSWNVPKQLFHQLRLYKSDSEQEMMRETCRIASEGFK 110 (413)
Q Consensus 61 ~~~~~~~l~~------------------------~------~~~~~~d~~~~l~~~R~vKs~~Ei~~~r~A~~i~~~~~~ 110 (413)
.+.+.++|+. + ++.+++++++++..+|++||++||+.||+|++++++++.
T Consensus 119 ~~~L~~~L~~~~~~Igv~~~~~~s~~~~~~L~~~l~~~~~~~~~~lv~~~~~i~~lr~iK~~~Ei~~~r~A~~i~~~a~~ 198 (467)
T 3biq_A 119 FDDVIALINSAGKTVGIPEKDSYQGKFMTEWNPVWEAAVKENEFNVIDISLGLSKVWEVKDVNEQAFLSVSSKGSDKFMD 198 (467)
T ss_dssp HHHHHHHHHHHCSEEEECTTCCCCSHHHHHHHHHHHHHHHHHTCEEEECHHHHHHHTCSCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhCCEEEEecCcccchhHHHHHHHHHHhhcccCCceeechHHHHHHHHccCCHHHHHHHHHHHHHHHHHHH
Confidence 2233333210 0 135678889999999999999999999999999999999
Q ss_pred HHHhccCC------CCCHHHHHHHHHHHHHH-----cCC---CCCCCCceeecCCCccccccccCCcccccCcceecccc
Q psy247 111 ETIGFSKP------GRTEHELFTKFDYEVRM-----RGA---QILAYPPVVASGDNANVIHYVHNNQKCCHGDLLLMDAG 176 (413)
Q Consensus 111 ~~~~~~~~------G~tE~el~~~~~~~~~~-----~G~---~~~~~~~iv~sG~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (413)
.+++.+++ |+||.||++.+++.+++ +|. ..+.. ++.+.
T Consensus 199 ~~~~~i~~~i~~g~g~te~el~~~~~~~~~~~~~~~~G~~~~~~~~~-----~~~~~----------------------- 250 (467)
T 3biq_A 199 LLSNEMVRAVDEELKITNAKLSDKIENKIDDVKFLKQLSPDLSALCP-----PNYKF----------------------- 250 (467)
T ss_dssp HHHHHHHHHHHTTCCCBHHHHHHHHHHGGGCHHHHHHHHHHHHTTSC-----TTCCC-----------------------
T ss_pred HHHHHhhhcccccCCccHHHHHHHHHHHHHhhhhhhcCCcccccccc-----ccccC-----------------------
Confidence 99999988 99999999999988776 440 00000 00000
Q ss_pred cCCCCCCHHHHHhhhHHHHHhhcccccCCCceeccCCCcc-ccccccCCccccCCCEEEEecceeeCcEEeceEEEEeec
Q psy247 177 FSKPGRTEHELFTKFDYEVRMRGAQILAYPPVVASGDNAN-VIHYVHNNQKCCHGDLLLMDAGCELNGYDSDITRTWPIS 255 (413)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g~~~~-~~h~~~~~~~i~~Gd~v~iD~g~~~~GY~aDitRT~~v~ 255 (413)
.....+.+|++++++|.|++ .+|+.|++++|++||+|++|+|++|+||++|+|||+++
T Consensus 251 --------------------~~~~~~~~f~~iv~~G~n~~~~~H~~~~~~~l~~gd~v~iD~g~~~~gy~sD~tRT~~~- 309 (467)
T 3biq_A 251 --------------------NFDLLDWTYSPIIQSGKKFDLRVSARSTNDQLYGNGCILASCGIRYNNYCSNITRTFLI- 309 (467)
T ss_dssp --------------------CGGGEEESSCCEEECTTCCCCSTTCCCCSSBCCCSEEEEEEECEEETTEECCEEEEEEE-
T ss_pred --------------------CcccccCCCCCeEEecCCcceeeccCCCCCccCCCCEEEEEEeEEECCEEeeeeEEEEe-
Confidence 00012357899999999988 99999999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHh-cccCCCCHHHHHHHH--HHHHcC--c-ccccccccccCCCCccCCCCCCCCCCCC
Q psy247 256 GQFTDHQKVLYEIVLDTQLKLLKL-CEKSDSALNFIYRYA--YVFQIG--F-KFCPHHSSHYLGMDVHDCAAIPRTIPVA 329 (413)
Q Consensus 256 G~~~~~~~~~~~~~~~a~~~~~~~-lkp~G~~~~ei~~~~--~~~~~g--~-~~~~h~~GHgiGl~~~E~p~~~~~~~~~ 329 (413)
| ++++|+++|+.+++++.+++++ +|| |+++.+|++++ .+.+.| + .+++|++||+||+++||.|.+..
T Consensus 310 g-~~~~~~~~~~~v~~a~~~~~~~~~~p-G~~~~~v~~~~~~~~~~~g~g~~~~~~h~~GHgiGl~~hE~p~~~~----- 382 (467)
T 3biq_A 310 D-PSEEMANNYDFLLTLQKEIVTNILKP-GRTPKEVYESVIEYIEKTKPELVPNFTKNIGSLIGLEFRDSNFILN----- 382 (467)
T ss_dssp S-CCHHHHHHHHHHHHHHHHHHHHTCCT-TCCHHHHHHHHHHHHHHHCGGGGGGBCSCCEEECSSSSCCGGGBSS-----
T ss_pred C-CCHHHHHHHHHHHHHHHHHHHhCCcC-CCcHHHHHHHHHHHHHHhCcchhhcCCCCcccccccccccCCccCC-----
Confidence 7 8999999999999999999999 999 99999999999 667775 5 67899999999999999996321
Q ss_pred CCcceecCCCCccccCCCCCC-CCCCCCCcEEEeCCeee-EcCCCCCcccccccceEEEceeEEEe--CCCCcccCCCCC
Q psy247 330 PGVVFTVEPGMDVHDCAAIPR-TIPVAPGMVFTVEPGVY-ISKDCKETRPEFRGMGIRIEDDILID--KSSNVENLSAMC 405 (413)
Q Consensus 330 ~g~~~~~~pg~~~~~~~~~~~-~~~L~~GMv~~iEPgi~-~~~~~~~~~~~~~~~gvriED~vlVt--~~G~~e~Lt~~~ 405 (413)
.++ +.+|+|||||+||||+| +.. +++.+.+|+||||+|+|| ++|+ |+||..+
T Consensus 383 ------------------~~~~~~~l~~Gmv~tiEPgiy~~~~-----~~~~g~~gvriEd~v~Vt~~~~G~-e~Lt~~~ 438 (467)
T 3biq_A 383 ------------------VKNDYRKIQRGDCFNISFGFNNLKD-----SQSANNYALQLADTVQIPLDETEP-PRFLTNY 438 (467)
T ss_dssp ------------------TTCCSCCCCTTCEEEEEEEEEEECC-----SSCSSCEEEEEEEEEECCSSTTSC-CEESCCS
T ss_pred ------------------CCCCCCccCCCCEEEEeCeEEeeec-----CCCCCccEEEEEEEEEEecCCCCc-EEecccC
Confidence 235 78999999999999999 611 111223799999999999 9999 9999448
Q ss_pred CCCccccC
Q psy247 406 PKNIDEIE 413 (413)
Q Consensus 406 p~~~~~ie 413 (413)
|+++..||
T Consensus 439 p~~~~~i~ 446 (467)
T 3biq_A 439 TKAKSQIS 446 (467)
T ss_dssp CCCHHHHE
T ss_pred CCCHHHHH
Confidence 99998774
No 16
>4fuk_A Methionine aminopeptidase; structural genomics consortium, SGC, hydrolase; 1.75A {Trypanosoma brucei brucei}
Probab=100.00 E-value=2.6e-52 Score=413.32 Aligned_cols=245 Identities=17% Similarity=0.195 Sum_probs=216.6
Q ss_pred HHHHHccCCHHHHHHHHHHHHHHHHHHHHHHhccCCCCCHHHHHHHHHHHHHHcCCCCCCCCceeecCCCccccccccCC
Q psy247 83 FHQLRLYKSDSEQEMMRETCRIASEGFKETIGFSKPGRTEHELFTKFDYEVRMRGAQILAYPPVVASGDNANVIHYVHNN 162 (413)
Q Consensus 83 l~~~R~vKs~~Ei~~~r~A~~i~~~~~~~~~~~~~~G~tE~el~~~~~~~~~~~G~~~~~~~~iv~sG~~~~~~~~~~~~ 162 (413)
....|.|||++||++||+|++|+++++..+++.++|||||.||++.+.+.++++|+...
T Consensus 57 ~~~~~~VKs~~EI~~mR~A~~i~~~a~~~~~~~ikpG~te~el~~~~~~~~~~~g~~~~--------------------- 115 (337)
T 4fuk_A 57 QFLHDDSKKTAEIQRIKTVCQLSREVLDIATAAAKPGITTDELDRIVHEATVERNMYPS--------------------- 115 (337)
T ss_dssp TTTTCTTC--CHHHHHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHHTTCEET---------------------
T ss_pred hhhcccCCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHcCCCcc---------------------
Confidence 34578999999999999999999999999999999999999999999999999987521
Q ss_pred cccccCcceecccccCCCCCCHHHHHhhhHHHHHhhcccccCCCceeccCCCccccccccCCccccCCCEEEEecceeeC
Q psy247 163 QKCCHGDLLLMDAGFSKPGRTEHELFTKFDYEVRMRGAQILAYPPVVASGDNANVIHYVHNNQKCCHGDLLLMDAGCELN 242 (413)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g~~~~~~h~~~~~~~i~~Gd~v~iD~g~~~~ 242 (413)
+..+.+|++++|+|.|++++|+.|++++|++||+|++|+|+.|+
T Consensus 116 ------------------------------------~~~~~~fp~iv~~g~n~~~~H~~~~~~~l~~GD~v~iD~g~~~~ 159 (337)
T 4fuk_A 116 ------------------------------------PLNYYGFPKSVCTSVNEVICHGIPDSRELEEGDILNIDVSSYLN 159 (337)
T ss_dssp ------------------------------------TTTGGGCCSSSEEEETTEEECCCCCSCBCCTTCEEEEEEEEEET
T ss_pred ------------------------------------CCCCCCcCceeeccccccccCCCCCCccccCCCEEEEecceeEC
Confidence 22356899999999999999999999999999999999999999
Q ss_pred cEEeceEEEEeecCCCCHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHH--HHHHcCcccccccccccCCCCccCCC
Q psy247 243 GYDSDITRTWPISGQFTDHQKVLYEIVLDTQLKLLKLCEKSDSALNFIYRYA--YVFQIGFKFCPHHSSHYLGMDVHDCA 320 (413)
Q Consensus 243 GY~aDitRT~~v~G~~~~~~~~~~~~~~~a~~~~~~~lkp~G~~~~ei~~~~--~~~~~g~~~~~h~~GHgiGl~~~E~p 320 (413)
||++|+||||++ |+++++++++|+.++++++++++++|| |++++++++++ .+.+.|+..+.|++|||||+.+||.|
T Consensus 160 GY~sD~tRT~~v-G~~~~~~~~l~~~v~ea~~~ai~~~kp-G~~~~di~~~~~~~~~~~g~~~~~~~~GHGIG~~~he~p 237 (337)
T 4fuk_A 160 GFHGDLNETVFI-GRPDDDSVRLVHAAYECLCAGIGVVKP-EALYKQVGDAIEACASQYQCSVVRTYTGHGVGHLFHTSP 237 (337)
T ss_dssp TEEEEEEEEEES-SSCCHHHHHHHHHHHHHHHHHHTTCST-TCBTTHHHHHHHHHHHTTTCEECSSEEEEECSSSSSEEE
T ss_pred CEEEeeeeeEEe-CCccHHHHHHHHHHHHHHHHHHhhccc-cccHHHHHHHHHHHHHHhcCCcccCcccCCCCCccccCC
Confidence 999999999999 999999999999999999999999999 99999999998 56677888889999999999999998
Q ss_pred CCCCCCCCCCCcceecCCCCccccCCCCCCCCCCCCCcEEEeCCeeeEcC-------CCCCcccccccceEEEceeEEEe
Q psy247 321 AIPRTIPVAPGVVFTVEPGMDVHDCAAIPRTIPVAPGMVFTVEPGVYISK-------DCKETRPEFRGMGIRIEDDILID 393 (413)
Q Consensus 321 ~~~~~~~~~~g~~~~~~pg~~~~~~~~~~~~~~L~~GMv~~iEPgi~~~~-------~~~~~~~~~~~~gvriED~vlVt 393 (413)
.++.+.. .+...+|+|||||||||++|++. ++|.+.++.+.+|+||||+|+||
T Consensus 238 ~~~~~~~--------------------~~~~~~L~~GMV~TIEPgiy~~~~~~~~~~D~wt~~t~dg~~gvriEd~VlVT 297 (337)
T 4fuk_A 238 TVCHYAN--------------------NKSLGMMRPGHVFTIEPMINLGTWQDVTWPDKWTSTTKDGRRSAQFEHTMVVT 297 (337)
T ss_dssp EECCSCC-----------------------CCBCCTTCEEEECCEEESSCSCEEECTTSSCEEETTCCCEEECBEEEEEC
T ss_pred ccccccc--------------------CCCCCEeCCCCEEEECCeeEcCCCcceEcCCCCeEEecCCceEEEeccEEEEc
Confidence 7653211 23467899999999999999863 56888888888999999999999
Q ss_pred CCCCcccCCCCCCCC
Q psy247 394 KSSNVENLSAMCPKN 408 (413)
Q Consensus 394 ~~G~~e~Lt~~~p~~ 408 (413)
++|+ |+||. +|+.
T Consensus 298 e~G~-EvLT~-~p~~ 310 (337)
T 4fuk_A 298 NGGV-EIFTD-WVDG 310 (337)
T ss_dssp SSSE-EESSC-CSSS
T ss_pred CCcC-EECCC-CCCC
Confidence 9999 99997 3544
No 17
>1kp0_A Creatine amidinohydrolase; alpha betal, 3-layer(ABA) sandwich; 2.70A {Actinobacillus} SCOP: c.55.2.1 d.127.1.1
Probab=100.00 E-value=2.3e-51 Score=415.82 Aligned_cols=315 Identities=18% Similarity=0.181 Sum_probs=250.4
Q ss_pred eeeeecCceEEecCCCCC----CEEEEEEcCCCCCceEEEEEeCcchhh---hcc------CC-C-cccHhhHhhhc---
Q psy247 7 YIFRQNTDFFYFTGCLEP----DSAVVIHGASDENFKSELFVKRKDAKA---ELW------DG-P-RTGKAQLNGYV--- 68 (413)
Q Consensus 7 ~~f~q~~n~~YltG~~~~----~~~lv~~~~~~~~~~~~l~v~~~~~~~---~~~------~~-~-~~~~~~~~~~l--- 68 (413)
+.+....|++|||||... .+.++++.+ +.+||++.++... +.+ .. . ....+.+.+++
T Consensus 43 ~li~~~~ni~yltgf~~s~~~~p~~llV~~~-----~~~l~~~~~~~~~a~~~~~~~~v~~~~~~~~~~~~~l~~~l~~~ 117 (402)
T 1kp0_A 43 VLFTSYHNINYYSGWLYCYFGRKYAZVIBZV-----KAVTISKGIDGGMPWRRSFGBNIVYTDWKRDNFYSAVKKLVKGA 117 (402)
T ss_dssp EEECSHHHHHHHHSCCCCCTTCCCEEEECSS-----CEEEEEEGGGTTHHHHHCSSEEEEECSSSTTHHHHHHHHHHTTC
T ss_pred EEEcCCCCceEecCCCCCCCCceEEEEEeCC-----CCEEEeccchhhhhHHhccCcceEeccccccCHHHHHHHHhccC
Confidence 566667899999999531 145566654 4788998765321 111 10 0 00122233322
Q ss_pred -------------------CCCCCCcccchHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHhccCCCCCHHHHHHHH
Q psy247 69 -------------------PRRKDYSWNVPKQLFHQLRLYKSDSEQEMMRETCRIASEGFKETIGFSKPGRTEHELFTKF 129 (413)
Q Consensus 69 -------------------~~~~~~~~~d~~~~l~~~R~vKs~~Ei~~~r~A~~i~~~~~~~~~~~~~~G~tE~el~~~~ 129 (413)
..+++.+++++++++..+|++||++||+.||+|++++++++..+++.++||+||.|+++.+
T Consensus 118 ~~igvd~~~~~~~~~~~l~~~l~~~~~v~~~~~i~~lR~iKs~~Ei~~~r~A~~i~~~a~~~~~~~i~~G~te~el~~~~ 197 (402)
T 1kp0_A 118 KZIGIEHDHVTLBHRRZLZKALPGTEFVDVGZPVMWZRVIKSSEEZBLIRZGARISDIGGAATAAAISAGVPEYEVAIAT 197 (402)
T ss_dssp SEEEECTTTCBHHHHHHHHHHSTTCEEEECHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHH
T ss_pred CEEEEecCCCCHHHHHHHHHhCCCCEEEECHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHH
Confidence 1134567889999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCCCCceeecCCCccccccccCCcccccCcceecccccCCCCCCHHHHHhhhHHHHHhhcccccCCCcee
Q psy247 130 DYEVRMRGAQILAYPPVVASGDNANVIHYVHNNQKCCHGDLLLMDAGFSKPGRTEHELFTKFDYEVRMRGAQILAYPPVV 209 (413)
Q Consensus 130 ~~~~~~~G~~~~~~~~iv~sG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 209 (413)
++.++++|+... .. ..+..+++++
T Consensus 198 ~~~~~~~g~~~~--~~------------------------------------------------------~~~~~~~~iv 221 (402)
T 1kp0_A 198 TBAMVRZIARBF--PY------------------------------------------------------VELMDTWIWF 221 (402)
T ss_dssp HHHHHHHHHHHS--SS------------------------------------------------------CEEEEEEEEE
T ss_pred HHHHHHhccccc--Cc------------------------------------------------------ccccCcccee
Confidence 999988875411 00 0012344578
Q ss_pred ccCCCccccccccCCccccCCCEEEEecceeeCcEEeceEEEEeecCCCCHHHHHHHHHHHHHHHHHHHhcccCCCCHHH
Q psy247 210 ASGDNANVIHYVHNNQKCCHGDLLLMDAGCELNGYDSDITRTWPISGQFTDHQKVLYEIVLDTQLKLLKLCEKSDSALNF 289 (413)
Q Consensus 210 ~~g~~~~~~h~~~~~~~i~~Gd~v~iD~g~~~~GY~aDitRT~~v~G~~~~~~~~~~~~~~~a~~~~~~~lkp~G~~~~e 289 (413)
++|.|++++|+.|++++|++||+|++|+|+.|+||++|+|||+++ |+|+++|+++|+.++++++++++++|| |+++++
T Consensus 222 ~~g~n~~~~H~~~~~~~l~~gd~v~iD~g~~~~gy~sD~tRT~~~-G~~~~~~~~~~~~v~~a~~~~~~~~~p-G~~~~~ 299 (402)
T 1kp0_A 222 QSGINTDGAHNPVTBRVVZRGDILSLNCFPMIFGYYTALERTLFL-ZZVBDASLZIWZKNTAVHRRGLZLIKP-GARCKD 299 (402)
T ss_dssp EEGGGGGSTTCCEECCBCCTTCEEEEEEEEEETTEECCEEEEEEE-SCCCHHHHHHHHHHHHHHHHHHHHCCT-TCBHHH
T ss_pred ecccccccccCCCCCcccCCCCEEEEEEEeeECCEeeecEEEEEc-CCCCHHHHHHHHHHHHHHHHHHHHcCC-CCcHHH
Confidence 889999999999999999999999999999999999999999999 999999999999999999999999999 999999
Q ss_pred HHHHH--HHHHcCc-ccccccccccCCCCccCCCCCCCCCCCCCCcceecCCCCccccCCCCCCCCCCCCCcEEEeCCee
Q psy247 290 IYRYA--YVFQIGF-KFCPHHSSHYLGMDVHDCAAIPRTIPVAPGVVFTVEPGMDVHDCAAIPRTIPVAPGMVFTVEPGV 366 (413)
Q Consensus 290 i~~~~--~~~~~g~-~~~~h~~GHgiGl~~~E~p~~~~~~~~~~g~~~~~~pg~~~~~~~~~~~~~~L~~GMv~~iEPgi 366 (413)
|++++ .+.+.|+ .++.|++||++|+++||.|.... . .+. .+++.+|+|||||+|||++
T Consensus 300 i~~~~~~~~~~~G~~~~~~~~~GHgiG~~~He~~~~~g-------~--~~~----------~~~~~~l~~Gmv~tiEPgi 360 (402)
T 1kp0_A 300 IASELNBMYRZWDLLRYRTFGYGHSFGVLBHYYGREAG-------V--ELR----------EDIZTVLEPGMVVSMEPMV 360 (402)
T ss_dssp HHHHHHHHHHHTTCGGGBCSCSCBBCEEEETTEECCTT-------C--BCC----------TTCCCBCCTTCEEEECCEE
T ss_pred HHHHHHHHHHHcCCCeecCCCcccccCCccccCCcccC-------c--ccC----------CCCCCccCCCcEEEECCce
Confidence 99999 7788898 67889999999999999875310 0 000 2357899999999999999
Q ss_pred eEcCCCCCcccccccceEEEceeEEEeCCCCcccCCCCCCCCccc
Q psy247 367 YISKDCKETRPEFRGMGIRIEDDILIDKSSNVENLSAMCPKNIDE 411 (413)
Q Consensus 367 ~~~~~~~~~~~~~~~~gvriED~vlVt~~G~~e~Lt~~~p~~~~~ 411 (413)
|++... .+.+|+|+||+|+||++|+ |+||. +|+++..
T Consensus 361 y~~~~~------~~~~G~ried~v~Vt~~g~-e~Lt~-~p~~~~~ 397 (402)
T 1kp0_A 361 MBPEGE------PGAGGYREHDILVIKENBT-ENITG-FPFGPEH 397 (402)
T ss_dssp EECTTS------TTCEEEECBEEEEEETTEE-EECCC-SCCSTTT
T ss_pred eecCcc------CCCCcEEEEEEEEEcCCcc-eECCC-CCCchHH
Confidence 998321 1116999999999999998 99998 7998754
No 18
>3tav_A Methionine aminopeptidase; ssgcid, seattle structural genomics center for infectious DI protease, hydrolase; 2.15A {Mycobacterium abscessus}
Probab=100.00 E-value=1.1e-51 Score=400.13 Aligned_cols=249 Identities=18% Similarity=0.201 Sum_probs=219.0
Q ss_pred cchHHHHHHHH--ccCCHHHHHHHHHHHHHHHHHHHHHHhccCCCCCHHHHHHHHHHHHHHcCCCCCCCCceeecCCCcc
Q psy247 77 NVPKQLFHQLR--LYKSDSEQEMMRETCRIASEGFKETIGFSKPGRTEHELFTKFDYEVRMRGAQILAYPPVVASGDNAN 154 (413)
Q Consensus 77 ~d~~~~l~~~R--~vKs~~Ei~~~r~A~~i~~~~~~~~~~~~~~G~tE~el~~~~~~~~~~~G~~~~~~~~iv~sG~~~~ 154 (413)
.++.+++.++| ++||++||++||+|++++++++..+++.++||+||.||++.+++.++++|++.. |.
T Consensus 20 ~~~~~~i~~~R~~~iKs~~EI~~~r~A~~i~~~a~~~~~~~i~~G~tE~el~~~~~~~~~~~G~~~~-~~---------- 88 (286)
T 3tav_A 20 GSMVGLFGRKKTVEQRTPGELDAMAAAGSIVGAALVAVRDAAKAGVSTLELDQVAESVIREAGAVPS-FL---------- 88 (286)
T ss_dssp ---CCTTCSCSBCCBCCHHHHHHHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHHTTCEET-TT----------
T ss_pred HHHHHHHHHhhhcccCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHcCCccc-cc----------
Confidence 45666777899 999999999999999999999999999999999999999999999999987631 11
Q ss_pred ccccccCCcccccCcceecccccCCCCCCHHHHHhhhHHHHHhhcccccCCCceeccCCCccccccccC-CccccCCCEE
Q psy247 155 VIHYVHNNQKCCHGDLLLMDAGFSKPGRTEHELFTKFDYEVRMRGAQILAYPPVVASGDNANVIHYVHN-NQKCCHGDLL 233 (413)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g~~~~~~h~~~~-~~~i~~Gd~v 233 (413)
.+.+|++++++|.|++++|+.|+ +++|++||+|
T Consensus 89 ----------------------------------------------~~~~f~~iv~~g~n~~~~H~~p~~~~~l~~Gd~v 122 (286)
T 3tav_A 89 ----------------------------------------------GYHGFPASICSSVNDQVVHGIPSATAVLADGDLV 122 (286)
T ss_dssp ----------------------------------------------TGGGCCSSEEEEETTBCSCCCCCTTCBCCTTCEE
T ss_pred ----------------------------------------------ccCCCCCceEEecCccccCCCCCCCcccCCCCEE
Confidence 02468899999999999999999 8999999999
Q ss_pred EEecceeeCcEEeceEEEEeecCCCCHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHH--HH----HHc--Cccccc
Q psy247 234 LMDAGCELNGYDSDITRTWPISGQFTDHQKVLYEIVLDTQLKLLKLCEKSDSALNFIYRYA--YV----FQI--GFKFCP 305 (413)
Q Consensus 234 ~iD~g~~~~GY~aDitRT~~v~G~~~~~~~~~~~~~~~a~~~~~~~lkp~G~~~~ei~~~~--~~----~~~--g~~~~~ 305 (413)
++|+|++|+||++|+||||++ |+|+++|+++|+.++++++++++++|| |++++||++++ .+ .+. |+..+.
T Consensus 123 ~iD~G~~~~GY~sD~tRT~~v-G~~~~~~~~~~~~v~~a~~~~i~~~kp-G~~~~~i~~~~~~~~~~~~~~~~~g~~~~~ 200 (286)
T 3tav_A 123 SIDCGAILDGWHGDSAWTFAV-GTVIPSDEALSEATRLSMEAGIAAMIP-GNRLTDVSHAIELGTRAAEKQFDRAFGIVD 200 (286)
T ss_dssp EEEEEEEETTEEEEEEEEEES-SSCCHHHHHHHHHHHHHHHHHHHTCCT-TCBHHHHHHHHHHHHHHHHHHHTCCCEECT
T ss_pred EEEEEEEECCEEEeeEEEEEC-CCCCHHHHHHHHHHHHHHHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHhcCCCcccC
Confidence 999999999999999999999 999999999999999999999999999 99999999998 66 777 886668
Q ss_pred ccccccCCCCccCCCCCCCCCCCCCCcceecCCCCccccCCCCCCCCCCCCCcEEEeCCeeeEcC-------CCCCcccc
Q psy247 306 HHSSHYLGMDVHDCAAIPRTIPVAPGVVFTVEPGMDVHDCAAIPRTIPVAPGMVFTVEPGVYISK-------DCKETRPE 378 (413)
Q Consensus 306 h~~GHgiGl~~~E~p~~~~~~~~~~g~~~~~~pg~~~~~~~~~~~~~~L~~GMv~~iEPgi~~~~-------~~~~~~~~ 378 (413)
|++||+||+++||.|.++++.. .+++.+|++||||+|||++|+++ ++|.+.++
T Consensus 201 ~~~GHgiG~~~hE~P~i~~~~~--------------------~~~~~~L~~GmV~tiEPgiy~~~~~~~~~~~~w~~~t~ 260 (286)
T 3tav_A 201 GYGGHGIGRSMHLDPFLPNEGA--------------------PGKGPLLAVGSVLAIEPMLTLGTTQTRVLADDWTVVTT 260 (286)
T ss_dssp TCCEEECSSSSSEEEEECSSCC--------------------SSCSSBCCTTBEEEECCEEESSCSCEEECTTSSCEEET
T ss_pred CcccCcccccccCCccccCcCC--------------------CCCCCCcCCCCEEEEcCEEEcCCCceEecCCCceEEec
Confidence 9999999999999998753210 23578999999999999999863 45666666
Q ss_pred cccceEEEceeEEEeCCCCcccCCCCCC
Q psy247 379 FRGMGIRIEDDILIDKSSNVENLSAMCP 406 (413)
Q Consensus 379 ~~~~gvriED~vlVt~~G~~e~Lt~~~p 406 (413)
.+.+|+|+||+|+||++|+ |+||. .|
T Consensus 261 dg~~gvriEd~v~Vt~~G~-e~LT~-~p 286 (286)
T 3tav_A 261 DGSRAAHWEHTVAVTEAGP-RILTM-RP 286 (286)
T ss_dssp TCCCEEECBEEEECCTTSC-EESSC-CC
T ss_pred CCCcEEEeeeEEEECCCcc-eeCCC-CC
Confidence 6678999999999999999 99997 45
No 19
>2gg2_A Methionine aminopeptidase; PITA-bread fold, MAP inhibitor, antibacterial, hydrolase; HET: U12; 1.00A {Escherichia coli K12} SCOP: d.127.1.1 PDB: 2gg0_A* 2gg3_A* 2gg5_A* 2gg7_A* 2gg8_A* 2gg9_A* 2ggb_A* 2ggc_A 2q93_A* 2q95_A* 2q96_A* 1xnz_A* 1mat_A* 2bb7_A* 2evc_A* 2evm_A* 2evo_A* 3mat_A* 1yvm_A* 2mat_A ...
Probab=100.00 E-value=7e-51 Score=389.90 Aligned_cols=244 Identities=22% Similarity=0.259 Sum_probs=217.1
Q ss_pred HHccCCHHHHHHHHHHHHHHHHHHHHHHhccCCCCCHHHHHHHHHHH-HHHcCCCCCCCCceeecCCCccccccccCCcc
Q psy247 86 LRLYKSDSEQEMMRETCRIASEGFKETIGFSKPGRTEHELFTKFDYE-VRMRGAQILAYPPVVASGDNANVIHYVHNNQK 164 (413)
Q Consensus 86 ~R~vKs~~Ei~~~r~A~~i~~~~~~~~~~~~~~G~tE~el~~~~~~~-~~~~G~~~~~~~~iv~sG~~~~~~~~~~~~~~ 164 (413)
||++||++||+.||+|++++++++..+++.++||+||.||++.+++. ++++|+.. ++.
T Consensus 1 m~~iKs~~Ei~~~r~A~~i~~~~~~~~~~~i~~G~te~el~~~~~~~~~~~~g~~~-~~~-------------------- 59 (263)
T 2gg2_A 1 AISIKTPEDIEKMRVAGRLAAEVLEMIEPYVKPGVSTGELDRICNDYIVNEQHAVS-ACL-------------------- 59 (263)
T ss_dssp CCCCCCHHHHHHHHHHHHHHHHHHHHHGGGCSTTCBHHHHHHHHHHHHHHTSCCEE-SST--------------------
T ss_pred CcccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHhCCcc-ccc--------------------
Confidence 57899999999999999999999999999999999999999999999 88777642 100
Q ss_pred cccCcceecccccCCCCCCHHHHHhhhHHHHHhhcccccCCCceeccCCCccccccccCC-ccccCCCEEEEecceeeCc
Q psy247 165 CCHGDLLLMDAGFSKPGRTEHELFTKFDYEVRMRGAQILAYPPVVASGDNANVIHYVHNN-QKCCHGDLLLMDAGCELNG 243 (413)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g~~~~~~h~~~~~-~~i~~Gd~v~iD~g~~~~G 243 (413)
.+.+|++++++|.|++++|+.|++ ++|++||+|++|+|++|+|
T Consensus 60 ------------------------------------~~~~f~~iv~~g~n~~~~H~~p~~~~~l~~gd~v~iD~G~~~~g 103 (263)
T 2gg2_A 60 ------------------------------------GYHGYPKSVCISINEVVCHGIPDDAKLLKDGDIVNIDVTVIKDG 103 (263)
T ss_dssp ------------------------------------TGGGCCSSSEEEETTEEECCCCCTTCBCCTTCEEEEEEEEEETT
T ss_pred ------------------------------------cccCCCcceEecccccccCCCCCCCcCcCCCCEEEEEEEEEECC
Confidence 124689999999999999999998 9999999999999999999
Q ss_pred EEeceEEEEeecCCCCHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHH--HHHHcCcccccccccccCCCCccCCCC
Q psy247 244 YDSDITRTWPISGQFTDHQKVLYEIVLDTQLKLLKLCEKSDSALNFIYRYA--YVFQIGFKFCPHHSSHYLGMDVHDCAA 321 (413)
Q Consensus 244 Y~aDitRT~~v~G~~~~~~~~~~~~~~~a~~~~~~~lkp~G~~~~ei~~~~--~~~~~g~~~~~h~~GHgiGl~~~E~p~ 321 (413)
|++|+|||+++ |+++++|+++|++++++++++++++|| |+++++|++++ .+.+.|+..+.|++||+||+++||.|.
T Consensus 104 y~sD~tRT~~v-G~~~~~~~~~~~~v~~a~~~~i~~~kp-G~~~~~v~~~~~~~~~~~G~~~~~~~~GHgiG~~~he~p~ 181 (263)
T 2gg2_A 104 FHGDTSKMFIV-GKPTIMGERLCRITQESLYLALRMVKP-GINLREIGAAIQKFVEAEGFSVVREYCGHGIGRGFHEEPQ 181 (263)
T ss_dssp EEEEEEEEEEC-SSCCHHHHHHHHHHHHHHHHHHHHCST-TCBHHHHHHHHHHHHHHTTCEECSSCCEEECSSSSSEEEE
T ss_pred EEEEEEEEEEc-CCCCHHHHHHHHHHHHHHHHHHHHhcC-CCCHHHHHHHHHHHHHHcCCEECCCcccccCCcceecCCc
Confidence 99999999999 999999999999999999999999999 99999999999 677889876789999999999999998
Q ss_pred CCCCCCCCCCcceecCCCCccccCCCCCCCCCCCCCcEEEeCCeeeEcC-------CCCCcccccccceEEEceeEEEeC
Q psy247 322 IPRTIPVAPGVVFTVEPGMDVHDCAAIPRTIPVAPGMVFTVEPGVYISK-------DCKETRPEFRGMGIRIEDDILIDK 394 (413)
Q Consensus 322 ~~~~~~~~~g~~~~~~pg~~~~~~~~~~~~~~L~~GMv~~iEPgi~~~~-------~~~~~~~~~~~~gvriED~vlVt~ 394 (413)
++++.. .+++.+|++||||+|||++|++. ++|.+.++++++|+|+||+|+||+
T Consensus 182 i~~~~~--------------------~~~~~~l~~Gmv~tiEPgi~~~~~~~~~~~~~~~~~~~~g~~g~riEdtvlVt~ 241 (263)
T 2gg2_A 182 VLHYDS--------------------RETNVVLKPGMTFTIEPMVNAGKKEIRTMKDGWTVKTKDRSLSAQYEHTIVVTD 241 (263)
T ss_dssp ECSSCC--------------------TTCCCBCCTTCEEEECCEEESSCSCEEECTTSSCEEETTCCCEEECBEEEEEET
T ss_pred ccCccC--------------------CCCCCCcCCCCEEEEecEEEcCCCceEEcCCCceEEecCCCeEEEEEEEEEECC
Confidence 653210 23578999999999999999753 356666777789999999999999
Q ss_pred CCCcccCCCCCCCCcc
Q psy247 395 SSNVENLSAMCPKNID 410 (413)
Q Consensus 395 ~G~~e~Lt~~~p~~~~ 410 (413)
+|+ |+||. .|+++.
T Consensus 242 ~G~-e~LT~-~p~~l~ 255 (263)
T 2gg2_A 242 NGC-EILTL-RKDDTI 255 (263)
T ss_dssp TEE-EESSC-CTTCCS
T ss_pred Ccc-EEeCC-CCcccC
Confidence 998 99998 698864
No 20
>3pka_A Methionine aminopeptidase; hydrolase-hydrolase inhibitor complex; HET: Y02; 1.25A {Mycobacterium tuberculosis} PDB: 3pkb_A* 3pkc_A* 3pkd_A* 3pke_A* 3iu7_A* 3iu8_A* 3iu9_A* 1y1n_A 1yj3_A 3ror_A
Probab=100.00 E-value=1.1e-50 Score=392.89 Aligned_cols=239 Identities=21% Similarity=0.281 Sum_probs=214.0
Q ss_pred HHHccCCHHHHHHHHHHHHHHHHHHHHHHhccCCCCCHHHHHHHHHHHHHHcCCCCCCCCceeecCCCccccccccCCcc
Q psy247 85 QLRLYKSDSEQEMMRETCRIASEGFKETIGFSKPGRTEHELFTKFDYEVRMRGAQILAYPPVVASGDNANVIHYVHNNQK 164 (413)
Q Consensus 85 ~~R~vKs~~Ei~~~r~A~~i~~~~~~~~~~~~~~G~tE~el~~~~~~~~~~~G~~~~~~~~iv~sG~~~~~~~~~~~~~~ 164 (413)
.+|++||++||++||+|++++++++..+++.++||+||.||++.+++.++++|+... +
T Consensus 37 ~~R~iKs~~EI~~~r~A~~i~~~a~~~~~~~i~pG~tE~el~~~~~~~~~~~G~~~~-~--------------------- 94 (285)
T 3pka_A 37 SEPWVQTPEVIEKMRVAGRIAAGALAEAGKAVAPGVTTDELDRIAHEYLVDNGAYPS-T--------------------- 94 (285)
T ss_dssp CSCSBCCHHHHHHHHHHHHHHHHHHHHHHHTCCTTCBHHHHHHHHHHHHHHTTCEET-T---------------------
T ss_pred cceecCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCCccc-c---------------------
Confidence 589999999999999999999999999999999999999999999999999986521 0
Q ss_pred cccCcceecccccCCCCCCHHHHHhhhHHHHHhhcccccCCCceeccCCCccccccccCCccccCCCEEEEecceeeCcE
Q psy247 165 CCHGDLLLMDAGFSKPGRTEHELFTKFDYEVRMRGAQILAYPPVVASGDNANVIHYVHNNQKCCHGDLLLMDAGCELNGY 244 (413)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g~~~~~~h~~~~~~~i~~Gd~v~iD~g~~~~GY 244 (413)
..+.+|++++++|.|++++|+.|++++|++||+|++|+|++|+||
T Consensus 95 -----------------------------------~~~~~f~~iv~~g~n~~~~H~~p~~~~l~~Gd~v~iD~G~~~~GY 139 (285)
T 3pka_A 95 -----------------------------------LGYKGFPKSCCTSLNEVICHGIPDSTVITDGDIVNIDVTAYIGGV 139 (285)
T ss_dssp -----------------------------------TTGGGCCSSSEEEETTEEECCCCCSCBCCTTCEEEEEEEEEETTE
T ss_pred -----------------------------------ccccCCCCceEecccceeecCCCCCcccCCCCEEEEEEEEEECCE
Confidence 012468889999999999999999999999999999999999999
Q ss_pred EeceEEEEeecCCCCHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHH--HHHHcCcccccccccccCCCCccCCCCC
Q psy247 245 DSDITRTWPISGQFTDHQKVLYEIVLDTQLKLLKLCEKSDSALNFIYRYA--YVFQIGFKFCPHHSSHYLGMDVHDCAAI 322 (413)
Q Consensus 245 ~aDitRT~~v~G~~~~~~~~~~~~~~~a~~~~~~~lkp~G~~~~ei~~~~--~~~~~g~~~~~h~~GHgiGl~~~E~p~~ 322 (413)
++|+||||++ |+++++|+++|++++++++++++++|| |++++||++++ .+.+.|+..+.|++||+||+++||.|.+
T Consensus 140 ~sD~tRT~~v-G~~~~~~~~~~~~v~~a~~~~i~~~kp-G~~~~di~~~~~~~~~~~G~~~~~~~~GHgiG~~~hE~P~i 217 (285)
T 3pka_A 140 HGDTNATFPA-GDVADEHRLLVDRTREATMRAINTVKP-GRALSVIGRVIESYANRFGYNVVRDFTGHGIGTTFHNGLVV 217 (285)
T ss_dssp EEEEEEEEEC-SSCCHHHHHHHHHHHHHHHHHHHTCCT-TSBTTHHHHHHHHHHHTTTCEECCSSCEEBCSSSSSCSCEE
T ss_pred EEEEEEEEEc-CCCCHHHHHHHHHHHHHHHHHHHHHhc-CCcHHHHHHHHHHHHHHcCCccCCCcccccCCCcccCCCcc
Confidence 9999999999 999999999999999999999999999 99999999998 6778898666999999999999999987
Q ss_pred CCCCCCCCCcceecCCCCccccCCCCCCCCCCCCCcEEEeCCeeeEcC-------CCCCcccccccceEEEceeEEEeCC
Q psy247 323 PRTIPVAPGVVFTVEPGMDVHDCAAIPRTIPVAPGMVFTVEPGVYISK-------DCKETRPEFRGMGIRIEDDILIDKS 395 (413)
Q Consensus 323 ~~~~~~~~g~~~~~~pg~~~~~~~~~~~~~~L~~GMv~~iEPgi~~~~-------~~~~~~~~~~~~gvriED~vlVt~~ 395 (413)
+++.. .+++.+|++||||+|||++|+++ ++|...++.+.+|+|+||+|+||++
T Consensus 218 ~~~~~--------------------~~~~~~L~~Gmv~tiEPgiy~~~~~~~~~~~gw~~~~~~g~~gvriEdtv~Vt~~ 277 (285)
T 3pka_A 218 LHYDQ--------------------PAVETIMQPGMTFTIEPMINLGALDYEIWDDGWTVVTKDRKWTAQFEHTLLVTDT 277 (285)
T ss_dssp CSSCC--------------------TTCCCBCCTTBEEEECCEEESSCSCEEECTTSCCEEETTCCCEEECBEEEEECSS
T ss_pred cCccC--------------------CCCCCccCCCCEEEEcCEEEcCCCceeecCCCceEEecCCCcEEEEeeEEEECCC
Confidence 53210 23578999999999999999864 4666666666789999999999999
Q ss_pred CCcccCCC
Q psy247 396 SNVENLSA 403 (413)
Q Consensus 396 G~~e~Lt~ 403 (413)
|+ |+||.
T Consensus 278 G~-e~LT~ 284 (285)
T 3pka_A 278 GV-EILTC 284 (285)
T ss_dssp SE-EESSC
T ss_pred cC-eECCC
Confidence 98 99996
No 21
>1o0x_A Methionine aminopeptidase; TM1478, structural genomics, JCSG, PSI, protein structure initiative, joint center for structural genomics; 1.90A {Thermotoga maritima} SCOP: d.127.1.1
Probab=100.00 E-value=1.5e-50 Score=387.43 Aligned_cols=240 Identities=21% Similarity=0.248 Sum_probs=214.4
Q ss_pred HHHHccCCHHHHHHHHHHHHHHHHHHHHHHhccCCCCCHHHHHHHHHHHHHHcCCCCCCCCceeecCCCccccccccCCc
Q psy247 84 HQLRLYKSDSEQEMMRETCRIASEGFKETIGFSKPGRTEHELFTKFDYEVRMRGAQILAYPPVVASGDNANVIHYVHNNQ 163 (413)
Q Consensus 84 ~~~R~vKs~~Ei~~~r~A~~i~~~~~~~~~~~~~~G~tE~el~~~~~~~~~~~G~~~~~~~~iv~sG~~~~~~~~~~~~~ 163 (413)
..+|++||++||+.||+|++++++++..+++.++||+||.||++.+++.++++|+.. .|.
T Consensus 11 ~~~R~iKs~~Ei~~~r~A~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~~G~~~-~~~------------------- 70 (262)
T 1o0x_A 11 HHMIRIKTPSEIEKMKKAGKAVAVALREVRKVIVPGKTAWDVETLVLEIFKKLRVKP-AFK------------------- 70 (262)
T ss_dssp --CCCCCCHHHHHHHHHHHHHHHHHHHHGGGGCSTTCBHHHHHHHHHHHHHHHTCEE-SST-------------------
T ss_pred ccccccCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCcHHHHHHHHHHHHHHcCCcc-ccc-------------------
Confidence 468999999999999999999999999999999999999999999999999998752 111
Q ss_pred ccccCcceecccccCCCCCCHHHHHhhhHHHHHhhcccccCCCceeccCCCccccccccCCcc-ccCCCEEEEecceeeC
Q psy247 164 KCCHGDLLLMDAGFSKPGRTEHELFTKFDYEVRMRGAQILAYPPVVASGDNANVIHYVHNNQK-CCHGDLLLMDAGCELN 242 (413)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g~~~~~~h~~~~~~~-i~~Gd~v~iD~g~~~~ 242 (413)
.+.+|++++++|.|++++|+.|++++ |++||+|++|+|+.|+
T Consensus 71 -------------------------------------~~~~f~~~v~~g~n~~~~H~~p~~~~~l~~Gd~v~iD~G~~~~ 113 (262)
T 1o0x_A 71 -------------------------------------GYGGYKYATCVSVNEEVVHGLPLKEKVFKEGDIVSVDVGAVYQ 113 (262)
T ss_dssp -------------------------------------TGGGCCCSEEEEETTBCSCCCCCTTCBCCTTCEEEEEEEEEET
T ss_pred -------------------------------------cccCCCcceEecccccccCCCCCCCcccCCCCEEEEEEEEEEC
Confidence 02468899999999999999999999 9999999999999999
Q ss_pred cEEeceEEEEeecCCCCHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHH--HHHHcCcccccccccccCCCCccCCC
Q psy247 243 GYDSDITRTWPISGQFTDHQKVLYEIVLDTQLKLLKLCEKSDSALNFIYRYA--YVFQIGFKFCPHHSSHYLGMDVHDCA 320 (413)
Q Consensus 243 GY~aDitRT~~v~G~~~~~~~~~~~~~~~a~~~~~~~lkp~G~~~~ei~~~~--~~~~~g~~~~~h~~GHgiGl~~~E~p 320 (413)
||++|+|||+++ |+++++|+++|++++++++++++++|| |++++||++++ .+.+.|+..++|++||+||+++||.|
T Consensus 114 GY~sD~tRT~~v-G~~~~~~~~~~~~v~~a~~~~i~~~kp-G~~~~~v~~~~~~~~~~~G~~~~~~~~GHgiG~~~he~p 191 (262)
T 1o0x_A 114 GLYGDAAVTYIV-GETDERGKELVRVTREVLEKAIKMIKP-GIRLGDVSHCIQETVESVGFNVIRDYVGHGVGRELHEDP 191 (262)
T ss_dssp TEEEEEEEEEES-SCCCHHHHHHHHHHHHHHHHHHHTCCT-TSBHHHHHHHHHHHHHHTTCEECCSSCEEECSSSSSEEE
T ss_pred CEEEEEEEEEEC-CCCCHHHHHHHHHHHHHHHHHHHHhcC-CCcHHHHHHHHHHHHHHcCCcccCCcccCcccccccCCC
Confidence 999999999999 999999999999999999999999999 99999999999 77788987778999999999999999
Q ss_pred CCCCCCCCCCCcceecCCCCccccCCCCCCCCCCCCCcEEEeCCeeeEc-------CCCCCcccccccceEEEceeEEEe
Q psy247 321 AIPRTIPVAPGVVFTVEPGMDVHDCAAIPRTIPVAPGMVFTVEPGVYIS-------KDCKETRPEFRGMGIRIEDDILID 393 (413)
Q Consensus 321 ~~~~~~~~~~g~~~~~~pg~~~~~~~~~~~~~~L~~GMv~~iEPgi~~~-------~~~~~~~~~~~~~gvriED~vlVt 393 (413)
.++++.. .+++.+|+|||||+|||++|++ .++|.+.++.+.+|+|+||+|+||
T Consensus 192 ~i~~~~~--------------------~~~~~~L~~Gmv~tiEPgi~~g~~~v~~~~~~w~~~~~~g~~gvriEdtvlVt 251 (262)
T 1o0x_A 192 QIPNYGT--------------------PGTGVVLRKGMTLAIEPMVSEGDWRVVVKEDGWTAVTVDGSRCAHFEHTILIT 251 (262)
T ss_dssp EECSCCC--------------------TTCSCBCCTTCEEEECCEEESSCCCEEECTTSSCEEETTCCCEEECBEEEEEC
T ss_pred ccCCCCC--------------------CCCCCccCCCCEEEECCEEEcCCCceeecCCCceEEeeCCCcEEEEEEEEEEC
Confidence 7653210 2357899999999999999984 245666666778899999999999
Q ss_pred CCCCcccCCC
Q psy247 394 KSSNVENLSA 403 (413)
Q Consensus 394 ~~G~~e~Lt~ 403 (413)
++|+ |+||.
T Consensus 252 ~~G~-e~LT~ 260 (262)
T 1o0x_A 252 ENGA-EILTK 260 (262)
T ss_dssp SSSE-EESSC
T ss_pred CCcc-EeCCC
Confidence 9998 99996
No 22
>3s6b_A Methionine aminopeptidase; malaria, proteolysis, "PITA bread" fold, structur genomics, structural genomics consortium, SGC, hydrolase; 1.95A {Plasmodium falciparum}
Probab=100.00 E-value=2.4e-50 Score=400.54 Aligned_cols=248 Identities=20% Similarity=0.235 Sum_probs=219.2
Q ss_pred HHHccCCHHHHHHHHHHHHHHHHHHHHHHhccCCCCCHHHHHHHHHHHHHHcCCCCCCCCceeecCCCccccccccCCcc
Q psy247 85 QLRLYKSDSEQEMMRETCRIASEGFKETIGFSKPGRTEHELFTKFDYEVRMRGAQILAYPPVVASGDNANVIHYVHNNQK 164 (413)
Q Consensus 85 ~~R~vKs~~Ei~~~r~A~~i~~~~~~~~~~~~~~G~tE~el~~~~~~~~~~~G~~~~~~~~iv~sG~~~~~~~~~~~~~~ 164 (413)
.++.|||++||++||+|++++++++..+++.++||+||.||++.+++.++++|+....
T Consensus 99 ~~~~IKs~~EIe~mR~A~~ia~~al~~~~~~ikpGvTE~El~~~~~~~~~~~Ga~ps~---------------------- 156 (368)
T 3s6b_A 99 SDIYVNNEEEIQRIREACILGRKTLDYAHTLVSPGVTTDEIDRKVHEFIIKNNAYPST---------------------- 156 (368)
T ss_dssp TCCCCCCHHHHHHHHHHHHHHHHHHHHHHHTCCTTCBHHHHHHHHHHHHHHTTCEETT----------------------
T ss_pred CCceeCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHcCCcccc----------------------
Confidence 4689999999999999999999999999999999999999999999999999875210
Q ss_pred cccCcceecccccCCCCCCHHHHHhhhHHHHHhhcccccCCCceeccCCCccccccccCCccccCCCEEEEecceeeCcE
Q psy247 165 CCHGDLLLMDAGFSKPGRTEHELFTKFDYEVRMRGAQILAYPPVVASGDNANVIHYVHNNQKCCHGDLLLMDAGCELNGY 244 (413)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g~~~~~~h~~~~~~~i~~Gd~v~iD~g~~~~GY 244 (413)
..+.+|++++|+|.|++++|+.|++++|++||+|+||+|+.|+||
T Consensus 157 -----------------------------------l~y~~Fp~iv~sg~N~~i~H~~p~~r~L~~GDiV~iD~G~~~~GY 201 (368)
T 3s6b_A 157 -----------------------------------LNYYKFPKSCCTSVNEIVCHGIPDYRPLKSGDIINIDISVFYKGV 201 (368)
T ss_dssp -----------------------------------TTGGGCCSSEEEEETTEEECCCCCSCBCCTTCEEEEEEEEEETTE
T ss_pred -----------------------------------ccccCCCCeEEEcCccccccCCCCCccccCCCEEEEEEeEEECcE
Confidence 013478999999999999999999999999999999999999999
Q ss_pred EeceEEEEeecC---CCCHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHH--HHHHcCcccccccccccCCCCccCC
Q psy247 245 DSDITRTWPISG---QFTDHQKVLYEIVLDTQLKLLKLCEKSDSALNFIYRYA--YVFQIGFKFCPHHSSHYLGMDVHDC 319 (413)
Q Consensus 245 ~aDitRT~~v~G---~~~~~~~~~~~~~~~a~~~~~~~lkp~G~~~~ei~~~~--~~~~~g~~~~~h~~GHgiGl~~~E~ 319 (413)
++|+||||++ | +++++|+++|++++++++++++++|| |++++||++++ .+.+.|+..+.|++|||||+++||.
T Consensus 202 ~sDitRT~~v-Gg~~~~s~e~~~ly~~v~ea~~aai~~ikP-G~~~~dI~~aa~~~i~~~G~~~~~~~~GHGIG~~vHE~ 279 (368)
T 3s6b_A 202 HSDLNETYFV-GDINDVPKEGKELVETCYFSLMEAIKKCKP-GMFYKNIGTLIDAYVSKKNFSVVRSYSGHGVGKLFHSN 279 (368)
T ss_dssp EEEEEEEEEC-SCGGGSCHHHHHHHHHHHHHHHHHHHHCCT-TCBTHHHHHHHHHHHHTTTCEECCSCCEEECSSSSSEE
T ss_pred EEEEEEEEEE-CCCCCCCHHHHHHHHHHHHHHHHHHHHccC-CCcHHHHHHHHHHHHHHcCCCcccceeeCCCCccccCC
Confidence 9999999999 6 99999999999999999999999999 99999999998 6778898767899999999999999
Q ss_pred CCCCCCCCCCCCcceecCCCCccccCCCCCCCCCCCCCcEEEeCCeeeEcC-------CCCCcccccccceEEEceeEEE
Q psy247 320 AAIPRTIPVAPGVVFTVEPGMDVHDCAAIPRTIPVAPGMVFTVEPGVYISK-------DCKETRPEFRGMGIRIEDDILI 392 (413)
Q Consensus 320 p~~~~~~~~~~g~~~~~~pg~~~~~~~~~~~~~~L~~GMv~~iEPgi~~~~-------~~~~~~~~~~~~gvriED~vlV 392 (413)
|.++.+.. .+...+|++||||||||++|++. ++|......+.+|+|+||+|+|
T Consensus 280 P~i~~~~~--------------------~~~~~~L~~GMVfTIEPgiy~~~~~~~~~~d~wt~~t~dG~~gvriEdtVlV 339 (368)
T 3s6b_A 280 PTVPHFKK--------------------NKAVGIMKPGHVFTIEPMINQGHYSDVLWPDQWTSATSDGKLSAQFEHTLLI 339 (368)
T ss_dssp EEECSSSS--------------------CCCCCBCCTTCEEEECCEEESSCSCEEECTTSSCEEETTCCCEEECBEEEEE
T ss_pred CccccccC--------------------CCCCCEECCCCEEEEcCeEEcCcccccccCCCceeEeeCCccEEEEeEEEEE
Confidence 98753210 12467999999999999999853 3555554445579999999999
Q ss_pred eCCCCcccCCCCCCCCcccc
Q psy247 393 DKSSNVENLSAMCPKNIDEI 412 (413)
Q Consensus 393 t~~G~~e~Lt~~~p~~~~~i 412 (413)
|++|+ |+||...|+++..+
T Consensus 340 Te~G~-EvLT~~~pk~~~~~ 358 (368)
T 3s6b_A 340 TNNGV-EILTKRTQDSPPLG 358 (368)
T ss_dssp ETTEE-EETTCCCTTCCCCS
T ss_pred cCCcC-eECCCCCCCCcCce
Confidence 99999 99998889988754
No 23
>4b28_A Metallopeptidase, family M24, putative; lyase, imethylsulfonioproionate, acrylate, dimethylsulfide; 2.15A {Roseobacter denitrificans och 114}
Probab=100.00 E-value=3.8e-51 Score=420.66 Aligned_cols=244 Identities=17% Similarity=0.229 Sum_probs=209.5
Q ss_pred CCcccchHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHhccCCCC-----CHHHHHHHHHHHHHHcCCCCCCCCcee
Q psy247 73 DYSWNVPKQLFHQLRLYKSDSEQEMMRETCRIASEGFKETIGFSKPGR-----TEHELFTKFDYEVRMRGAQILAYPPVV 147 (413)
Q Consensus 73 ~~~~~d~~~~l~~~R~vKs~~Ei~~~r~A~~i~~~~~~~~~~~~~~G~-----tE~el~~~~~~~~~~~G~~~~~~~~iv 147 (413)
+++++|+++++..+|++||++||+.||+|++++++++..+++.++||+ ||.||++.+++.++++|++. .|.+
T Consensus 213 ~~~~vd~~~~v~~lR~iKs~~EI~~mr~A~~i~~~a~~~~~~~i~pG~~~~~~tE~el~~~l~~~~~~~G~~~-~~~~-- 289 (470)
T 4b28_A 213 GFEIMDGEEVTEKARSVKGPDEIRAMRCASHACEVAVRKMEDFARSKVGDGVTCENDIWAILHSENVRRGGEW-IETR-- 289 (470)
T ss_dssp TCEEEEHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSCCBHHHHHHHHHHHHHTTTCCE-ESCC--
T ss_pred CCEEEEcHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHcCCCc-CCCc--
Confidence 578899999999999999999999999999999999999999999999 99999999999999988763 3444
Q ss_pred ecCCCccccccccCCcccccCcceecccccCCCCCCHHHHHhhhHHHHHhhcccccCCCceeccCCCccccccccCCccc
Q psy247 148 ASGDNANVIHYVHNNQKCCHGDLLLMDAGFSKPGRTEHELFTKFDYEVRMRGAQILAYPPVVASGDNANVIHYVHNNQKC 227 (413)
Q Consensus 148 ~sG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g~~~~~~h~~~~~~~i 227 (413)
++++|.|++.+|+.|++++|
T Consensus 290 ------------------------------------------------------------ivasG~n~~~~H~~~~~~~l 309 (470)
T 4b28_A 290 ------------------------------------------------------------LLASGPRSNPWFQECGPRVC 309 (470)
T ss_dssp ------------------------------------------------------------CEEEGGGGSSTTCCCCSCBC
T ss_pred ------------------------------------------------------------eeEEcCccccCCCCCCCccc
Confidence 44555555667778888899
Q ss_pred cCCCEEEEeccee-eCcEEeceEEEEeecC--CCCHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHH--HHHHcCcc
Q psy247 228 CHGDLLLMDAGCE-LNGYDSDITRTWPISG--QFTDHQKVLYEIVLDTQLKLLKLCEKSDSALNFIYRYA--YVFQIGFK 302 (413)
Q Consensus 228 ~~Gd~v~iD~g~~-~~GY~aDitRT~~v~G--~~~~~~~~~~~~~~~a~~~~~~~lkp~G~~~~ei~~~~--~~~~~g~~ 302 (413)
++||+|++|+|+. |+||++|+|||+++ | +|+++|+++|+.++++++++++++|| |+++.+|++++ .+.+.+..
T Consensus 310 ~~Gd~vliD~G~~g~~GY~sDitRT~~v-G~~~~s~~~~~~y~~v~~a~~a~i~~ikp-G~~~~di~~~ar~~i~~~~~~ 387 (470)
T 4b28_A 310 QRNEIISFDTDLVGAYGICTDISRSWWI-GDQKPRADMIYAMQHGVEHIRTNMEMLKP-GVMIPELSANTHVLDAKFQKQ 387 (470)
T ss_dssp CSSEEEEEECCEECGGGCEECCEEEEEE-SSSCCCHHHHHHHHHHHHHHHHHHHTCCT-TCBHHHHHHTCCCCCHHHHTT
T ss_pred cCCCEEEEEecccccCeEEEeeEEEEEE-CCCCCCHHHHHHHHHHHHHHHHHHHHccC-CCCHHHHHHHHHHHHHHhhhc
Confidence 9999999999998 99999999999999 6 79999999999999999999999999 99999999987 33343332
Q ss_pred cccccccccCCCCccCCCCCCCCCCCCCCcceecCCCCccccCCCCCCCCCCCCCcEEEeCCeeeE-cCCCCCccccccc
Q psy247 303 FCPHHSSHYLGMDVHDCAAIPRTIPVAPGVVFTVEPGMDVHDCAAIPRTIPVAPGMVFTVEPGVYI-SKDCKETRPEFRG 381 (413)
Q Consensus 303 ~~~h~~GHgiGl~~~E~p~~~~~~~~~~g~~~~~~pg~~~~~~~~~~~~~~L~~GMv~~iEPgi~~-~~~~~~~~~~~~~ 381 (413)
+.|++|||||+ +||.|.+..... +...+++.+|+|||||+|||++|. ++.
T Consensus 388 -~~~~~GHGIGl-~HE~P~i~~~~~-----------------~~~~~~~~~L~~GMV~tiEPgiy~~~g~---------- 438 (470)
T 4b28_A 388 -KYGCLMHGVGL-CDEWPLVAYPDH-----------------AVAGAYDYPLEPGMTLCVEALISEEGGD---------- 438 (470)
T ss_dssp -CCSCSEEEESS-SEEEEEECCTTT-----------------CCTTSSCCBCCTTCEEEEEEEEECTTCS----------
T ss_pred -CCCCccCCCCc-CCCCCcccCccc-----------------cccCCCCCEECCCCEEEEcCeeecCCCc----------
Confidence 34899999999 699998753100 000235789999999999999998 554
Q ss_pred ceEEEceeEEEeCCCCcccCCCCCCCCcccc
Q psy247 382 MGIRIEDDILIDKSSNVENLSAMCPKNIDEI 412 (413)
Q Consensus 382 ~gvriED~vlVt~~G~~e~Lt~~~p~~~~~i 412 (413)
+|+||||+|+||++|+ |+||. +|+++..|
T Consensus 439 ~GvriEd~vlVte~G~-e~LT~-~p~~l~li 467 (470)
T 4b28_A 439 FSIKLEDQVLITEDGY-ENLTK-YPFDPALM 467 (470)
T ss_dssp CEEEEEEEEEECSSSE-EECCC-CCCCHHHH
T ss_pred EEEEEeeEEEEeCCcC-eECCC-CCCcHHhc
Confidence 7999999999999999 99998 79987543
No 24
>1chm_A Creatine amidinohydrolase; creatinase; 1.90A {Pseudomonas putida} SCOP: c.55.2.1 d.127.1.1
Probab=100.00 E-value=4e-50 Score=406.84 Aligned_cols=313 Identities=19% Similarity=0.216 Sum_probs=246.3
Q ss_pred eeeeecCceEEecCCCC----CCEEEEEEcCCCCCceEEEEEeCcchhh---hccC-------C-C-cccHhhHhhhcC-
Q psy247 7 YIFRQNTDFFYFTGCLE----PDSAVVIHGASDENFKSELFVKRKDAKA---ELWD-------G-P-RTGKAQLNGYVP- 69 (413)
Q Consensus 7 ~~f~q~~n~~YltG~~~----~~~~lv~~~~~~~~~~~~l~v~~~~~~~---~~~~-------~-~-~~~~~~~~~~l~- 69 (413)
+.+....|++||||+.. ...+++++.+ +.+||++..+... +.+. . . ....+.+.+++.
T Consensus 42 ~li~~~~ni~yltg~~~~~~~~~~~llv~~~-----~~~l~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~l~~ 116 (401)
T 1chm_A 42 AIFTSYHNINYYSDFLYCSFGRPYALVVTED-----DVISISANIDGGQPWRRTVGTDNIVYTDWQRDNYFAAIQQALPK 116 (401)
T ss_dssp EEECSHHHHHHHHSCCCCCTTCCCEEEECSS-----CEEEEEEGGGTTHHHHHCCSSEEEEECTTSTTHHHHHHHHHCSC
T ss_pred EEEeCcccceeeCCCCcCCCCCeEEEEEecC-----CCEEEecccchhhHHHhhcccceeeeccccccCHHHHHHHHhcc
Confidence 55666789999999852 1235556654 3677887655432 1111 0 0 001122333321
Q ss_pred ---------------------CCCCCcccchHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHhccCCCCCHHHHHHH
Q psy247 70 ---------------------RRKDYSWNVPKQLFHQLRLYKSDSEQEMMRETCRIASEGFKETIGFSKPGRTEHELFTK 128 (413)
Q Consensus 70 ---------------------~~~~~~~~d~~~~l~~~R~vKs~~Ei~~~r~A~~i~~~~~~~~~~~~~~G~tE~el~~~ 128 (413)
.+++.++++++.++..+|++||++||+.||+|+++++.++..+.+.++||+||.|+++.
T Consensus 117 ~~~i~ve~~~~~~~~~~~l~~~~~~~~~~~~~~~i~~~R~iKs~~Ei~~~r~A~~i~~~~~~~~~~~i~~G~tE~el~~~ 196 (401)
T 1chm_A 117 ARRIGIEHDHLNLQNRDKLAARYPDAELVDVAAACMRMRMIKSAEEHVMIRHGARIADIGGAAVVEALGDQVPEYEVALH 196 (401)
T ss_dssp CSEEEECTTTCBHHHHHHHHHHCTTCEEEECHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHH
T ss_pred CCeEEEecCCCCHHHHHHHHhhCCCCEEEEhHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHH
Confidence 13456789999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCCCCceeecCCCccccccccCCcccccCcceecccccCCCCCCHHHHHhhhHHHHHhhcccccCCCc-
Q psy247 129 FDYEVRMRGAQILAYPPVVASGDNANVIHYVHNNQKCCHGDLLLMDAGFSKPGRTEHELFTKFDYEVRMRGAQILAYPP- 207 (413)
Q Consensus 129 ~~~~~~~~G~~~~~~~~iv~sG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 207 (413)
+++.++++|+.... ....|++
T Consensus 197 ~~~~~~~~~~~~~~----------------------------------------------------------~~~~~~~~ 218 (401)
T 1chm_A 197 ATQAMVRAIADTFE----------------------------------------------------------DVELMDTW 218 (401)
T ss_dssp HHHHHHHHHHHHCS----------------------------------------------------------SCCBCCCE
T ss_pred HHHHHHHhccccCC----------------------------------------------------------CccccCcc
Confidence 99988887643110 0012443
Q ss_pred -eeccCCCccccccccCCccccCCCEEEEecceeeCcEEeceEEEEeecCCCCHHHHHHHHHHHHHHHHHHHhcccCCCC
Q psy247 208 -VVASGDNANVIHYVHNNQKCCHGDLLLMDAGCELNGYDSDITRTWPISGQFTDHQKVLYEIVLDTQLKLLKLCEKSDSA 286 (413)
Q Consensus 208 -~v~~g~~~~~~h~~~~~~~i~~Gd~v~iD~g~~~~GY~aDitRT~~v~G~~~~~~~~~~~~~~~a~~~~~~~lkp~G~~ 286 (413)
++++|.|++.+|+.|++++|++||+|++|+|+.|+||++|+|||+++ |+|+++|+++|+.+++++.++++++|| |++
T Consensus 219 ~~~~~g~n~~~~H~~~~~~~l~~gd~v~iD~G~~~~gY~sD~tRT~~~-G~~~~~~~~~y~~v~~a~~~~i~~~~p-G~~ 296 (401)
T 1chm_A 219 TWFQSGINTDGAHNPVTTRKVNKGDILSLNCFPMIAGYYTALERTLFL-DHCSDDHLRLWQVNVEVHEAGLKLIKP-GAR 296 (401)
T ss_dssp EEEEEGGGGGSTTCCEESCBCCTTCEEEEEEECEETTEECCEEEEEEE-SCCCHHHHHHHHHHHHHHHHHHHHCCT-TCB
T ss_pred eeeeecccccccccCCCCCccCCCCEEEEEEEEeeCCEeecceEEEEC-CCCCHHHHHHHHHHHHHHHHHHHHcCC-CCc
Confidence 46788888899999999999999999999999999999999999999 999999999999999999999999999 999
Q ss_pred HHHHHHHH--HHHHcCc-ccccccccccCCCCccCCCCCCCCCCCCCCcceecCCCCccccCCCCCCCCCCCCCcEEEeC
Q psy247 287 LNFIYRYA--YVFQIGF-KFCPHHSSHYLGMDVHDCAAIPRTIPVAPGVVFTVEPGMDVHDCAAIPRTIPVAPGMVFTVE 363 (413)
Q Consensus 287 ~~ei~~~~--~~~~~g~-~~~~h~~GHgiGl~~~E~p~~~~~~~~~~g~~~~~~pg~~~~~~~~~~~~~~L~~GMv~~iE 363 (413)
+++|++++ .+.+.|+ .++.|++||++|+++|+.|... |+ .+. .+++.+|+||||||||
T Consensus 297 ~~~v~~~~~~~~~~~G~~~~~~~~~GHgiG~~~h~~~~~~-------g~--~~~----------~~~~~~L~~Gmv~tiE 357 (401)
T 1chm_A 297 CSDIARELNEIFLKHDVLQYRTFGYGHSFGTLSHYYGREA-------GL--ELR----------EDIDTVLEPGMVVSME 357 (401)
T ss_dssp HHHHHHHHHHHHHHHTCGGGBCSCSCBBCSBEETTEECCT-------TS--BCC----------TTCCCBCCTTCEEEEC
T ss_pred HHHHHHHHHHHHHHcCCCcccCCCCCcccCccCCcccccc-------Cc--ccc----------CCCCCccCCCCEEEEc
Confidence 99999998 7778898 6788999999999999977421 00 000 2357899999999999
Q ss_pred CeeeEcCCCCCcccccccceEEEceeEEEeCCCCcccCCCCCCCCccc
Q psy247 364 PGVYISKDCKETRPEFRGMGIRIEDDILIDKSSNVENLSAMCPKNIDE 411 (413)
Q Consensus 364 Pgi~~~~~~~~~~~~~~~~gvriED~vlVt~~G~~e~Lt~~~p~~~~~ 411 (413)
||+|++... .+.+|+|+||+|+||++|+ |+||. +|+++.+
T Consensus 358 Pgiy~~~~~------~g~~GvriEd~vlVt~~G~-e~LT~-~p~~~~~ 397 (401)
T 1chm_A 358 PMIMLPEGL------PGAGGYREHDILIVNENGA-ENITK-FPYGPEK 397 (401)
T ss_dssp CEEEECTTS------TTCEEEECBEEEEEETTEE-EECCC-SCCSHHH
T ss_pred Ceeeecccc------CCCCeEEEeeeEEECCCcc-eECCC-CCCChhh
Confidence 999997321 0116999999999999998 99998 7998754
No 25
>2b3h_A Methionine aminopeptidase 1; hydrolase, metalloprotease, pitab; HET: GOL; 1.10A {Homo sapiens} PDB: 2b3k_A 2b3l_A 2gz5_A* 2nq6_A* 2nq7_A* 2g6p_A*
Probab=100.00 E-value=1e-49 Score=392.62 Aligned_cols=245 Identities=18% Similarity=0.226 Sum_probs=216.0
Q ss_pred HHHccCCHHHHHHHHHHHHHHHHHHHHHHhccCCCCCHHHHHHHHHHHHHHcCCCCCCCCceeecCCCccccccccCCcc
Q psy247 85 QLRLYKSDSEQEMMRETCRIASEGFKETIGFSKPGRTEHELFTKFDYEVRMRGAQILAYPPVVASGDNANVIHYVHNNQK 164 (413)
Q Consensus 85 ~~R~vKs~~Ei~~~r~A~~i~~~~~~~~~~~~~~G~tE~el~~~~~~~~~~~G~~~~~~~~iv~sG~~~~~~~~~~~~~~ 164 (413)
.+|.+||++||+.||+|++++++++..+++.++||+||.||++.+++.++++|+....
T Consensus 71 ~~~~iKs~~EI~~mR~A~~ia~~al~~~~~~i~pGvte~el~~~~~~~~~~~G~~~~~---------------------- 128 (329)
T 2b3h_A 71 SQIKLLSSEDIEGMRLVCRLAREVLDVAAGMIKPGVTTEEIDHAVHLACIARNCYPSP---------------------- 128 (329)
T ss_dssp CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHTCCTTCBHHHHHHHHHHHHHHTTCEETT----------------------
T ss_pred cccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcHHHHHHHHHHHHHHcCCcccc----------------------
Confidence 4689999999999999999999999999999999999999999999999999865210
Q ss_pred cccCcceecccccCCCCCCHHHHHhhhHHHHHhhcccccCCCceeccCCCccccccccCCccccCCCEEEEecceeeCcE
Q psy247 165 CCHGDLLLMDAGFSKPGRTEHELFTKFDYEVRMRGAQILAYPPVVASGDNANVIHYVHNNQKCCHGDLLLMDAGCELNGY 244 (413)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g~~~~~~h~~~~~~~i~~Gd~v~iD~g~~~~GY 244 (413)
..+.+|++++|+|.|++++|+.|++++|++||+|++|+|+.|+||
T Consensus 129 -----------------------------------~~y~~fp~iv~sg~n~~~~H~~p~~~~L~~GDiv~iD~G~~~~GY 173 (329)
T 2b3h_A 129 -----------------------------------LNYYNFPKSCCTSVNEVICHGIPDRRPLQEGDIVNVDITLYRNGY 173 (329)
T ss_dssp -----------------------------------TTGGGCCSSSEEEETTEEECCCCCSCBCCTTCEEEEEEEEEETTE
T ss_pred -----------------------------------ccccCCCCeEEecCCCCcCCCCCCCcCCCCCCEEEEEeeEEECCE
Confidence 013479999999999999999999999999999999999999999
Q ss_pred EeceEEEEeecCCCCHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHH--HHHHcCcccccccccccCCCCccCCCCC
Q psy247 245 DSDITRTWPISGQFTDHQKVLYEIVLDTQLKLLKLCEKSDSALNFIYRYA--YVFQIGFKFCPHHSSHYLGMDVHDCAAI 322 (413)
Q Consensus 245 ~aDitRT~~v~G~~~~~~~~~~~~~~~a~~~~~~~lkp~G~~~~ei~~~~--~~~~~g~~~~~h~~GHgiGl~~~E~p~~ 322 (413)
++|+||||++ |+++++|+++|++++++++++++++|| |++++||++++ .+.+.|+..+.|.+|||||+++||.|.+
T Consensus 174 ~sD~tRT~~v-G~~~~~~~~l~~~v~~a~~~ai~~~kP-G~~~~dI~~~~~~~~~~~G~~~~~~~~GHGIG~~~HE~P~i 251 (329)
T 2b3h_A 174 HGDLNETFFV-GEVDDGARKLVQTTYECLMQAIDAVKP-GVRYRELGNIIQKHAQANGFSVVRSYCGHGIHKLFHTAPNV 251 (329)
T ss_dssp EEEEEEEEEC-SSCCHHHHHHHHHHHHHHHHHHHTCCT-TCBTTHHHHHHHHHHHHTTCEECCSCCEEECSSSSSEEEEE
T ss_pred EEeeEEEEEe-CCCCHHHHHHHHHHHHHHHHHHHhcCC-CCcHHHHHHHHHHHHHHcCCCccCCcccCCcCcccccCCcc
Confidence 9999999999 889999999999999999999999999 99999999999 7788898767899999999999999987
Q ss_pred CCCCCCCCCcceecCCCCccccCCCCCCCCCCCCCcEEEeCCeeeEc-------CCCCCcccccccceEEEceeEEEeCC
Q psy247 323 PRTIPVAPGVVFTVEPGMDVHDCAAIPRTIPVAPGMVFTVEPGVYIS-------KDCKETRPEFRGMGIRIEDDILIDKS 395 (413)
Q Consensus 323 ~~~~~~~~g~~~~~~pg~~~~~~~~~~~~~~L~~GMv~~iEPgi~~~-------~~~~~~~~~~~~~gvriED~vlVt~~ 395 (413)
+.+.. .....+|++||||||||++|++ .++|...+..+.+|+|+||+|+||++
T Consensus 252 ~~~~~--------------------~~~~~~L~~GMVftIEPgiy~~~~~~~~~~d~w~~~~~~G~~g~riEdtvlVTe~ 311 (329)
T 2b3h_A 252 PHYAK--------------------NKAVGVMKSGHVFTIEPMICEGGWQDETWPDGWTAVTRDGKRSAQFEHTLLVTDT 311 (329)
T ss_dssp CCSSS--------------------CCCCCBCCTTCEEEECCEEESSCCCEEECTTSCCEEETTCCCEEECBEEEEECSS
T ss_pred ccccc--------------------CCCCCEECCCCEEEEeCCcCcCcccccccCCCceeEeeCCeEEEEEeeEEEEcCC
Confidence 53210 1224799999999999999964 23455544445579999999999999
Q ss_pred CCcccCCCCC-CCCc
Q psy247 396 SNVENLSAMC-PKNI 409 (413)
Q Consensus 396 G~~e~Lt~~~-p~~~ 409 (413)
|+ |+||... |+++
T Consensus 312 G~-evLT~~~~~k~~ 325 (329)
T 2b3h_A 312 GC-EILTRRLDSARP 325 (329)
T ss_dssp SE-EETTCCSSCSSC
T ss_pred ee-EECCCCCCCCCC
Confidence 98 9999876 8775
No 26
>1qxy_A Methionyl aminopeptidase; PITA bread fold, hydrolase; HET: M2C; 1.04A {Staphylococcus aureus} SCOP: d.127.1.1 PDB: 1qxw_A* 1qxz_A*
Probab=100.00 E-value=7.1e-49 Score=373.54 Aligned_cols=238 Identities=18% Similarity=0.204 Sum_probs=210.3
Q ss_pred cCCHHHHHHHHHHHHHHHHHHHHHHhccCCCCCHHHHHHHHHHHHHHcCCCCCCCCceeecCCCccccccccCCcccccC
Q psy247 89 YKSDSEQEMMRETCRIASEGFKETIGFSKPGRTEHELFTKFDYEVRMRGAQILAYPPVVASGDNANVIHYVHNNQKCCHG 168 (413)
Q Consensus 89 vKs~~Ei~~~r~A~~i~~~~~~~~~~~~~~G~tE~el~~~~~~~~~~~G~~~~~~~~iv~sG~~~~~~~~~~~~~~~~~~ 168 (413)
+||++||+.||+|++++++++..+++.++||+||.||++.+++.++++|++.. |.
T Consensus 3 iKs~~Ei~~~r~A~~i~~~~~~~~~~~i~~G~te~el~~~~~~~~~~~g~~~~-~~------------------------ 57 (252)
T 1qxy_A 3 VKTEEELQALKEIGYICAKVRNTMQAATKPGITTKELDNIAKELFEEYGAISA-PI------------------------ 57 (252)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHHHTCEEH-HH------------------------
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCcHHHHHHHHHHHHHHcCCccc-cc------------------------
Confidence 89999999999999999999999999999999999999999999999986521 00
Q ss_pred cceecccccCCCCCCHHHHHhhhHHHHHhhcccccCCCceeccCCCccccccccCCccccCCCEEEEecceeeCcEEece
Q psy247 169 DLLLMDAGFSKPGRTEHELFTKFDYEVRMRGAQILAYPPVVASGDNANVIHYVHNNQKCCHGDLLLMDAGCELNGYDSDI 248 (413)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g~~~~~~h~~~~~~~i~~Gd~v~iD~g~~~~GY~aDi 248 (413)
.+.+|++++++|.|++++|+.|++++|++||+|++|+|+.|+||++|+
T Consensus 58 --------------------------------~~~~f~~~v~~g~n~~~~H~~p~~~~l~~gd~v~iD~g~~~~gy~sD~ 105 (252)
T 1qxy_A 58 --------------------------------HDENFPGQTCISVNEEVAHGIPSKRVIREGDLVNIDVSALKNGYYADT 105 (252)
T ss_dssp --------------------------------HHHCCSSSSEEEETTEEECCCCCSCBCCTTCEEEEEEEEEETTEEEEE
T ss_pred --------------------------------ccCCCCcceEEcCCccccCCCCCCcCcCCCCEEEEEeeEEECCEEEEE
Confidence 012688889999999999999999999999999999999999999999
Q ss_pred EEEEeecCCCCH-HHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHH--HHHHcCcccccccccccCCCCccCCC-CCCC
Q psy247 249 TRTWPISGQFTD-HQKVLYEIVLDTQLKLLKLCEKSDSALNFIYRYA--YVFQIGFKFCPHHSSHYLGMDVHDCA-AIPR 324 (413)
Q Consensus 249 tRT~~v~G~~~~-~~~~~~~~~~~a~~~~~~~lkp~G~~~~ei~~~~--~~~~~g~~~~~h~~GHgiGl~~~E~p-~~~~ 324 (413)
||||++ |++++ +|+++|++++++++++++++|| |+++++|++++ .+.+.|+..+.|++||+||+++||.| .+++
T Consensus 106 tRT~~v-G~~~~~~~~~~~~~~~~a~~~~i~~~kp-G~~~~~i~~~~~~~~~~~g~~~~~~~~GHgiG~~~he~p~~i~~ 183 (252)
T 1qxy_A 106 GISFVV-GESDDPMKQKVCDVATMAFENAIAKVKP-GTKLSNIGKAVHNTARQNDLKVIKNLTGHGVGLSLHEAPAHVLN 183 (252)
T ss_dssp EEEEEC-SCCSCTHHHHHHHHHHHHHHHHHTTCCT-TCBTHHHHHHHHHHHHHTTCEECTTCCEEECSSSSSEEEEEECS
T ss_pred EEEEEc-CCCCHHHHHHHHHHHHHHHHHHHHHhcC-CCCHHHHHHHHHHHHHHcCCEecCCccccccCcccccCCccccC
Confidence 999999 99999 9999999999999999999999 99999999999 67788987778999999999999999 7653
Q ss_pred CCCCCCCcceecCCCCccccCCCCCCCCCCCCCcEEEeCCeeeEc-------CCCCCcccccccceEEEceeEEEeCCCC
Q psy247 325 TIPVAPGVVFTVEPGMDVHDCAAIPRTIPVAPGMVFTVEPGVYIS-------KDCKETRPEFRGMGIRIEDDILIDKSSN 397 (413)
Q Consensus 325 ~~~~~~g~~~~~~pg~~~~~~~~~~~~~~L~~GMv~~iEPgi~~~-------~~~~~~~~~~~~~gvriED~vlVt~~G~ 397 (413)
+.. .+++.+|++||||+|||++|+. .++|.+.++.+.+|+|+||+|+||++|
T Consensus 184 ~~~--------------------~~~~~~l~~Gmv~tiEPgi~~g~~~~~~~~~~~~~~~~~g~~g~riEdtvlVt~~G- 242 (252)
T 1qxy_A 184 YFD--------------------PKDKTLLTEGMVLAIEPFISSNASFVTEGKNEWAFETSDKSFVAQIEHTVIVTKDG- 242 (252)
T ss_dssp SCC--------------------TTCCCBCCTTBEEEECCEEESSCSSCEECSSSSCEECTTCCCEEEEEEEEECCTTC-
T ss_pred CCC--------------------CCCCCCccCCCEEEEecEEEcCCCceEecCCCceEEecCCCcEEEEEEEEEECCCc-
Confidence 311 2357899999999999999974 235666667778899999999999999
Q ss_pred cccCCCCCCCC
Q psy247 398 VENLSAMCPKN 408 (413)
Q Consensus 398 ~e~Lt~~~p~~ 408 (413)
|+||. .|++
T Consensus 243 -e~Lt~-~p~~ 251 (252)
T 1qxy_A 243 -PILTT-KIEE 251 (252)
T ss_dssp -CEETT-CC--
T ss_pred -eEccC-CCCC
Confidence 89998 6875
No 27
>3ctz_A XAA-Pro aminopeptidase 1; PITA-bread fold, alternative splicing, cytoplasm, hydrolase, manganese, metal-binding, metalloprotease, protease; HET: P6G; 1.60A {Homo sapiens}
Probab=100.00 E-value=2.6e-47 Score=405.10 Aligned_cols=241 Identities=24% Similarity=0.344 Sum_probs=207.3
Q ss_pred cccchHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHhc----c-CCCCCHHHHHHHHHHHHHHc-CCCCCCCCceee
Q psy247 75 SWNVPKQLFHQLRLYKSDSEQEMMRETCRIASEGFKETIGF----S-KPGRTEHELFTKFDYEVRMR-GAQILAYPPVVA 148 (413)
Q Consensus 75 ~~~d~~~~l~~~R~vKs~~Ei~~~r~A~~i~~~~~~~~~~~----~-~~G~tE~el~~~~~~~~~~~-G~~~~~~~~iv~ 148 (413)
++++....+..+|++||++||+.||+|++++..++..++.+ + ++|+||.|+++.++...++. |...
T Consensus 307 ~~v~~~~~i~~~R~iK~~~EI~~~r~A~~~~~~a~~~~~~~l~~~i~~~g~tE~el~~~l~~~~~~~~g~~~-------- 378 (623)
T 3ctz_A 307 RCCMPYTPICIAKAVKNSAESEGMRRAHIKDAVALCELFNWLEKEVPKGGVTEISAADKAEEFRRQQADFVD-------- 378 (623)
T ss_dssp EEEESSCHHHHHHHSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCCBHHHHHHHHHHHHHTSTTEEE--------
T ss_pred eEEecccHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcHHHHHHHHHHHHHhcCCCcC--------
Confidence 46677788999999999999999999999999998887754 5 79999999999998654432 2222
Q ss_pred cCCCccccccccCCcccccCcceecccccCCCCCCHHHHHhhhHHHHHhhcccccCCCceeccCCCccccccccC---Cc
Q psy247 149 SGDNANVIHYVHNNQKCCHGDLLLMDAGFSKPGRTEHELFTKFDYEVRMRGAQILAYPPVVASGDNANVIHYVHN---NQ 225 (413)
Q Consensus 149 sG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g~~~~~~h~~~~---~~ 225 (413)
.+|++++++|.|++++||.|+ ++
T Consensus 379 ------------------------------------------------------~sf~~iv~~G~n~a~~H~~~~~~~~~ 404 (623)
T 3ctz_A 379 ------------------------------------------------------LSFPTISSTGPTGAIIHYAPVPETNR 404 (623)
T ss_dssp ------------------------------------------------------ESSCCEEEEGGGGGCTTCCCCGGGCC
T ss_pred ------------------------------------------------------CCCCceeeecCccccccCCCCCCCCc
Confidence 356666667777777777764 78
Q ss_pred cccCCCEEEEecceeeCcEEeceEEEEeecCCCCHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHH--HHHHcCccc
Q psy247 226 KCCHGDLLLMDAGCELNGYDSDITRTWPISGQFTDHQKVLYEIVLDTQLKLLKLCEKSDSALNFIYRYA--YVFQIGFKF 303 (413)
Q Consensus 226 ~i~~Gd~v~iD~g~~~~GY~aDitRT~~v~G~~~~~~~~~~~~~~~a~~~~~~~lkp~G~~~~ei~~~~--~~~~~g~~~ 303 (413)
+|++||+|++|+|++|+||++|+|||+++ |+|+++|+++|+.+++++.+++++++|.|+++.+++.++ .+++.|+.
T Consensus 405 ~l~~gd~vliD~G~~y~gy~sDiTRT~~v-G~~s~~~~~~y~~vl~a~~~~~~~~~p~G~~~~~id~~ar~~l~~~G~~- 482 (623)
T 3ctz_A 405 TLSLDEVYLIDSGAQYKDGTTDVTRTMHF-ETPTAYEKECFTYVLKGHIAVSAAVFPTGTKGHLLDSFARSALWDSGLD- 482 (623)
T ss_dssp BCCTTSCEEEEECEEETTEECCEEEEECS-SCCCHHHHHHHHHHHHHHHHHHTCCEETTCBGGGGGGGGTHHHHHTTCC-
T ss_pred ccCCCCEEEEEEeEEECCEEEEEEEEEEC-CCCCHHHHHHHHHHHHHHHHHHHHhCcCCCcHHHHHHHHHHHHHHhCCC-
Confidence 99999999999999999999999999999 999999999999999999999999997578899999887 77888985
Q ss_pred ccccccccCC--CCccCCCC-CCCCCCCCCCcceecCCCCccccCCCCCCCCCCCCCcEEEeCCeeeEcCCCCCcccccc
Q psy247 304 CPHHSSHYLG--MDVHDCAA-IPRTIPVAPGVVFTVEPGMDVHDCAAIPRTIPVAPGMVFTVEPGVYISKDCKETRPEFR 380 (413)
Q Consensus 304 ~~h~~GHgiG--l~~~E~p~-~~~~~~~~~g~~~~~~pg~~~~~~~~~~~~~~L~~GMv~~iEPgi~~~~~~~~~~~~~~ 380 (413)
++|++||||| +++||.|. +... ..++.+|+|||||++|||+|+++.
T Consensus 483 ~~h~~GHgvG~~l~vHE~P~~i~~~----------------------~~~~~~L~~GMv~tiEPGiy~~g~--------- 531 (623)
T 3ctz_A 483 YLHGTGHGVGSFLNVHEGPCGISYK----------------------TFSDEPLEAGMIVTDEPGYYEDGA--------- 531 (623)
T ss_dssp CSSCSEEBCCSSSCSSCCSCEECTT----------------------CSCSCBCCTTCEEEECCEEEETTT---------
T ss_pred CCCCccccCCCCCCCCCCCccCCCC----------------------CCCCCccCCCeEEEEeCcEEECCc---------
Confidence 5799999999 99999997 3210 124678999999999999999876
Q ss_pred cceEEEceeEEEeCC------------CCcccCCCCCCCCccccC
Q psy247 381 GMGIRIEDDILIDKS------------SNVENLSAMCPKNIDEIE 413 (413)
Q Consensus 381 ~~gvriED~vlVt~~------------G~~e~Lt~~~p~~~~~ie 413 (413)
+|+||||+|+||++ |+ |+||. +|++...||
T Consensus 532 -~GiRiEd~vlVt~~~~~~~~~~~~~lg~-e~LT~-~P~~~~~i~ 573 (623)
T 3ctz_A 532 -FGIRIENVVLVVPVKTKYNFNNRGSLTL-EPLTL-VPIQTKMID 573 (623)
T ss_dssp -EEEECBEEEEEEEECCSSCCSSSCEEEE-EECCC-CCCCGGGSC
T ss_pred -eEEEEeeEEEEecCCcccccccccccCC-ceeee-CCccHHHHH
Confidence 89999999999998 87 99997 899998876
No 28
>2q8k_A Proliferation-associated protein 2G4; EBP1, PA2G4, methionine aminopeptidase, PITA-bread, transcri; 1.60A {Homo sapiens} PDB: 2v6c_A
Probab=100.00 E-value=1.8e-41 Score=342.28 Aligned_cols=258 Identities=14% Similarity=0.108 Sum_probs=202.5
Q ss_pred HHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHhccCCCCCHHHHHHHHHHHHHHcCCCCCCCCceeecCCCcccccccc
Q psy247 81 QLFHQLRLYKSDSEQEMMRETCRIASEGFKETIGFSKPGRTEHELFTKFDYEVRMRGAQILAYPPVVASGDNANVIHYVH 160 (413)
Q Consensus 81 ~~l~~~R~vKs~~Ei~~~r~A~~i~~~~~~~~~~~~~~G~tE~el~~~~~~~~~~~G~~~~~~~~iv~sG~~~~~~~~~~ 160 (413)
+-+..+|.+||++||+.||+|++++++++..+.+.++||+||.||.+.+++.++++|+. .|.. ..
T Consensus 11 ~~v~~~r~iKs~~EI~~mR~A~~i~~~~l~~~~~~ikpGvte~el~~~~~~~i~~~ga~--~~~~-----~~-------- 75 (401)
T 2q8k_A 11 EDEQQEQTIAEDLVVTKYKMGGDIANRVLRSLVEASSSGVSVLSLCEKGDAMIMEETGK--IFKK-----EK-------- 75 (401)
T ss_dssp ---CCCCCTTSHHHHHHHHHHHHHHHHHHHHHHHHCC-CCBHHHHHHHHHHHHHHHHHT--SSTT-----CT--------
T ss_pred ccHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHcCCh--hhcc-----cc--------
Confidence 34567899999999999999999999999999999999999999999999999998863 2210 00
Q ss_pred CCcccccCcceecccccCCCCCCHHHHHhhhHHHHHhhcccccCCCceeccCCCcccccccc--CC--ccccCCCEEEEe
Q psy247 161 NNQKCCHGDLLLMDAGFSKPGRTEHELFTKFDYEVRMRGAQILAYPPVVASGDNANVIHYVH--NN--QKCCHGDLLLMD 236 (413)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g~~~~~~h~~~--~~--~~i~~Gd~v~iD 236 (413)
....+.+|+ +|++.|.+++|+.| ++ ++|++||+|+||
T Consensus 76 -------------------------------------~~~~g~~f~--~~vS~N~~v~H~~P~~~d~~~~L~~GDiV~ID 116 (401)
T 2q8k_A 76 -------------------------------------EMKKGIAFP--TSISVNNCVCHFSPLKSDQDYILKEGDLVKID 116 (401)
T ss_dssp -------------------------------------TCCEEEEEE--EEEEETTEEECCCCCTTSCCCBCCTTCEEEEE
T ss_pred -------------------------------------cccCCCCCC--cEEeCCcccccCCCCCCCCCcccCCCCEEEEE
Confidence 000112344 44458999999998 53 899999999999
Q ss_pred cceeeCcEEeceEEEEeecC-----CCCHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHH--HHHHcCccccccccc
Q psy247 237 AGCELNGYDSDITRTWPISG-----QFTDHQKVLYEIVLDTQLKLLKLCEKSDSALNFIYRYA--YVFQIGFKFCPHHSS 309 (413)
Q Consensus 237 ~g~~~~GY~aDitRT~~v~G-----~~~~~~~~~~~~~~~a~~~~~~~lkp~G~~~~ei~~~~--~~~~~g~~~~~h~~G 309 (413)
+|+.|+||++|++|||++ | +++++++++|+++++++.++++++|| |++++||++++ .+.+.|+....+.+|
T Consensus 117 ~G~~~~GY~sD~tRT~~v-G~~~eg~~s~~~~~l~~~~~~a~~~~i~~~kP-G~~~~dI~~ai~~~~~~~G~~~v~~~~G 194 (401)
T 2q8k_A 117 LGVHVDGFIANVAHTFVV-DVAQGTQVTGRKADVIKAAHLCAEAALRLVKP-GNQNTQVTEAWNKVAHSFNCTPIEGMLS 194 (401)
T ss_dssp EEEEETTEEEEEEEEEET-TCC-CCCBCHHHHHHHHHHHHHHHHHHHHCST-TCBHHHHHHHHHHHHHTTTCEECTTCEE
T ss_pred EEEEECCEEEEEEEEEEE-CCccCCCCCHHHHHHHHHHHHHHHHHHHHhCC-CCcHHHHHHHHHHHHHHcCCeecCCccc
Confidence 999999999999999999 6 89999999999999999999999999 99999999999 677888876778999
Q ss_pred ccCCCCccCCCC-CC-CCCCCCCCcceecCCCCccccCCCCCCCCCCCCCcEEEeCCeeeEcC-------CCCCc-----
Q psy247 310 HYLGMDVHDCAA-IP-RTIPVAPGVVFTVEPGMDVHDCAAIPRTIPVAPGMVFTVEPGVYISK-------DCKET----- 375 (413)
Q Consensus 310 HgiGl~~~E~p~-~~-~~~~~~~g~~~~~~pg~~~~~~~~~~~~~~L~~GMv~~iEPgi~~~~-------~~~~~----- 375 (413)
|+||+++||.|. ++ ++.. + .+ ..+...+|++||||+|||+++... +.|..
T Consensus 195 HGIG~~~HE~P~~i~~~~~~---~-----~~--------~~~~~~~L~~GmV~tIEP~i~~G~g~v~~~~~~~t~y~~~~ 258 (401)
T 2q8k_A 195 HQLKQHVIDGEKTIIQNPTD---Q-----QK--------KDHEKAEFEVHEVYAVDVLVSSGEGKAKDAGQRTTIYKRDP 258 (401)
T ss_dssp EEEBTTBSSCSCEEESSCCH---H-----HH--------HHSCCCBCCTTCEEEEEEEEESSCCCCEECSCCCCEEEECT
T ss_pred ccCCCccccCCcccccCCCc---c-----cc--------cCCCCCEeCCCCEEEEeCceEecCCEEEECCCCceEEeecc
Confidence 999999999996 22 1100 0 00 002356788888888888776421 12222
Q ss_pred ---------------------------------------------------------ccccccceEEEceeEEEeCCCCc
Q psy247 376 ---------------------------------------------------------RPEFRGMGIRIEDDILIDKSSNV 398 (413)
Q Consensus 376 ---------------------------------------------------------~~~~~~~gvriED~vlVt~~G~~ 398 (413)
.++.+++.+++|+||+||++|+
T Consensus 259 ~~~~~lk~~~sr~~l~~i~~~~~~~pF~~r~l~~~~~~~~g~~e~~~~~~l~~~~vl~t~dg~~~Aq~EhTvlvt~~G~- 337 (401)
T 2q8k_A 259 SKQYGLKMKTSRAFFSEVERRFDAMPFTLRAFEDEKKARMGVVECAKHELLQPFNVLYEKEGEFVAQFKFTVLLMPNGP- 337 (401)
T ss_dssp TCCCCCSSHHHHHHHHHHHHHHTTSCEEGGGCC--HHHHHHHHHHHHTTSEEEECCEECCTTCCEEEEEEEEEEETTEE-
T ss_pred ccccccccHHHHHHHHHHHHhCCCCccchhhhCcchhHHHHHHHHHHcCCccCCCceEeeCCCEEEEEEEEEEECCCCc-
Confidence 3344556799999999999999
Q ss_pred ccCCCCCCCCcccc
Q psy247 399 ENLSAMCPKNIDEI 412 (413)
Q Consensus 399 e~Lt~~~p~~~~~i 412 (413)
++||. .|.++..+
T Consensus 338 eilT~-~~~~~~~~ 350 (401)
T 2q8k_A 338 MRITS-GPFEPDLY 350 (401)
T ss_dssp EECCC-CCCCGGGB
T ss_pred EEecC-CCCCHhhc
Confidence 99998 58766444
No 29
>1xgs_A Methionine aminopeptidase; hyperthermophIle; 1.75A {Pyrococcus furiosus} SCOP: a.4.5.25 d.127.1.1 PDB: 1xgm_A 1xgn_A 1xgo_A 1wkm_A 2dfi_A
Probab=100.00 E-value=3.8e-40 Score=320.22 Aligned_cols=185 Identities=21% Similarity=0.277 Sum_probs=163.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhccCCCCCHHHHHHHHHHHHHHcCCCCCCCCceeecCCCccccccccCCcccccCccee
Q psy247 93 SEQEMMRETCRIASEGFKETIGFSKPGRTEHELFTKFDYEVRMRGAQILAYPPVVASGDNANVIHYVHNNQKCCHGDLLL 172 (413)
Q Consensus 93 ~Ei~~~r~A~~i~~~~~~~~~~~~~~G~tE~el~~~~~~~~~~~G~~~~~~~~iv~sG~~~~~~~~~~~~~~~~~~~~~~ 172 (413)
+||+.||+|++++++++..+++.++||+||.||++.+++.++++|+. .+|+
T Consensus 1 eEI~~mr~A~~i~~~~l~~~~~~i~pG~te~el~~~~~~~~~~~G~~-~~fp---------------------------- 51 (295)
T 1xgs_A 1 MDTEKLMKAGEIAKKVREKAIKLARPGMLLLELAESIEKMIMELGGK-PAFP---------------------------- 51 (295)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHHTTCE-ESSC----------------------------
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHcCCC-CCCC----------------------------
Confidence 48999999999999999999999999999999999999999999876 3444
Q ss_pred cccccCCCCCCHHHHHhhhHHHHHhhcccccCCCceeccCCCccccccccC---CccccCCCEEEEecceeeCcEEeceE
Q psy247 173 MDAGFSKPGRTEHELFTKFDYEVRMRGAQILAYPPVVASGDNANVIHYVHN---NQKCCHGDLLLMDAGCELNGYDSDIT 249 (413)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g~~~~~~h~~~~---~~~i~~Gd~v~iD~g~~~~GY~aDit 249 (413)
++++ .|..++|+.|+ +++|++||+|++|+|+.|+||++|++
T Consensus 52 ----------------------------------~~vs--~n~~~~H~~p~~~~~~~L~~GDiv~iD~G~~~~GY~sD~t 95 (295)
T 1xgs_A 52 ----------------------------------VNLS--INEIAAHYTPYKGDTTVLKEGDYLKIDVGVHIDGFIADTA 95 (295)
T ss_dssp ----------------------------------CEEE--ETTEEECCCCCTTCCCBCCTTCEEEEEEEEEETTEEEEEE
T ss_pred ----------------------------------cEEe--eCCccccccCCCCCCccccCCCEEEEEEeEEECCEEEEEE
Confidence 3332 34567788886 78999999999999999999999999
Q ss_pred EEEeecCCCCHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHH--HHHHcCcccccccccccCC-CCccCCCCCCCCC
Q psy247 250 RTWPISGQFTDHQKVLYEIVLDTQLKLLKLCEKSDSALNFIYRYA--YVFQIGFKFCPHHSSHYLG-MDVHDCAAIPRTI 326 (413)
Q Consensus 250 RT~~v~G~~~~~~~~~~~~~~~a~~~~~~~lkp~G~~~~ei~~~~--~~~~~g~~~~~h~~GHgiG-l~~~E~p~~~~~~ 326 (413)
|||++ |+ +++++|+++++++.++++++|| |++++||++++ .+.+.|+.++.|++||+|| +++||.|.+++..
T Consensus 96 RT~~v-G~---~~~~l~~~~~~a~~~~i~~~kp-G~~~~dI~~a~~~~~~~~G~~~~~~~~GHgIG~l~~He~p~ip~~~ 170 (295)
T 1xgs_A 96 VTVRV-GM---EEDELMEAAKEALNAAISVARA-GVEIKELGKAIENEIRKRGFKPIVNLSGHKIERYKLHAGISIPNIY 170 (295)
T ss_dssp EEEET-TS---CCCHHHHHHHHHHHHHHHHCST-TCBTHHHHHHHHHHHHTTTCEECTTCCEEECBTTBSSCSCEECSSC
T ss_pred EEEEe-CH---HHHHHHHHHHHHHHHHHHHhCC-CCcHHHHHHHHHHHHHHCCCeEECCCcCCCCCCcccCCCCcCCccC
Confidence 99999 65 7889999999999999999999 99999999999 7778899888999999998 7999999875421
Q ss_pred CCCCCcceecCCCCccccCCCCCCCCCCCCCcEEEeCCeee
Q psy247 327 PVAPGVVFTVEPGMDVHDCAAIPRTIPVAPGMVFTVEPGVY 367 (413)
Q Consensus 327 ~~~~g~~~~~~pg~~~~~~~~~~~~~~L~~GMv~~iEPgi~ 367 (413)
+ .+.+.+|+|||||+|||++|
T Consensus 171 ~--------------------~~~~~~L~~GmV~tIEP~i~ 191 (295)
T 1xgs_A 171 R--------------------PHDNYVLKEGDVFAIEPFAT 191 (295)
T ss_dssp C--------------------TTCCCBCCTTCEEEECCEEE
T ss_pred C--------------------CCCCCEeCCCCEEEEcceeE
Confidence 1 12278999999999999998
No 30
>1b6a_A Methionine aminopeptidase; angiogenesis inhibitor; HET: TN4; 1.60A {Homo sapiens} SCOP: a.4.5.25 d.127.1.1 PDB: 1qzy_A* 1boa_A* 1kq0_A 1kq9_A 1bn5_A* 1b59_A* 1yw9_A* 1r5g_A* 1r5h_A* 1r58_A* 1yw8_A* 1yw7_A* 2adu_A* 2ea2_A* 2ea4_A* 2ga2_A* 2oaz_A*
Probab=100.00 E-value=4.7e-38 Score=321.06 Aligned_cols=196 Identities=19% Similarity=0.155 Sum_probs=167.8
Q ss_pred HHHc--cCCHHHHHHHHHHHHHHHHHHHHHHhccCCCCCHHHHHHHHHHHHHHc----CCCCCCCCceeecCCCcccccc
Q psy247 85 QLRL--YKSDSEQEMMRETCRIASEGFKETIGFSKPGRTEHELFTKFDYEVRMR----GAQILAYPPVVASGDNANVIHY 158 (413)
Q Consensus 85 ~~R~--vKs~~Ei~~~r~A~~i~~~~~~~~~~~~~~G~tE~el~~~~~~~~~~~----G~~~~~~~~iv~sG~~~~~~~~ 158 (413)
++|. +||++||+.||+|++++.+++..+.+.++||+||.||++.+++.+++. |+.
T Consensus 154 elR~i~iKs~~EIe~mR~A~~Ia~~al~~~~~~ikpGvTe~ELa~~le~~~~~~i~~~Ga~------------------- 214 (478)
T 1b6a_A 154 EKKALDQASEEIWNDFREAAEAHRQVRKYVMSWIKPGMTMIEICEKLEDCSRKLIKENGLN------------------- 214 (478)
T ss_dssp HHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHCCTTSBHHHHHHHHHHHHHHHHTCBTTT-------------------
T ss_pred HHHHhhcCCHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcHHHHHHHHHHHHHHHHHhcCCc-------------------
Confidence 4454 599999999999999999999999999999999999999888887654 431
Q ss_pred ccCCcccccCcceecccccCCCCCCHHHHHhhhHHHHHhhcccccCCCceeccCCCccccccccC---CccccCCCEEEE
Q psy247 159 VHNNQKCCHGDLLLMDAGFSKPGRTEHELFTKFDYEVRMRGAQILAYPPVVASGDNANVIHYVHN---NQKCCHGDLLLM 235 (413)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g~~~~~~h~~~~---~~~i~~Gd~v~i 235 (413)
.+.+||++++ .|.+++|+.|+ +++|++||+|+|
T Consensus 215 ------------------------------------------~g~~FP~ivS--vN~~v~Hg~P~~~d~r~Lk~GDiV~I 250 (478)
T 1b6a_A 215 ------------------------------------------AGLAFPTGCS--LNNCAAHYTPNAGDTTVLQYDDICKI 250 (478)
T ss_dssp ------------------------------------------EEEEEEEEEE--ETTEEECCCCCTTCCCBCCTTCCEEE
T ss_pred ------------------------------------------ccCCCCeEEE--CCCccccCCCCcccCccccCCCeEEE
Confidence 1135666654 37778999997 589999999999
Q ss_pred ecceeeCcEEeceEEEEeecCCCCHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHH--HHHHcCcc---------cc
Q psy247 236 DAGCELNGYDSDITRTWPISGQFTDHQKVLYEIVLDTQLKLLKLCEKSDSALNFIYRYA--YVFQIGFK---------FC 304 (413)
Q Consensus 236 D~g~~~~GY~aDitRT~~v~G~~~~~~~~~~~~~~~a~~~~~~~lkp~G~~~~ei~~~~--~~~~~g~~---------~~ 304 (413)
|+|+.|+||++|++|||++ | ++++++|+++++++.++++++|| |+++++|++++ .+.+.|+. ++
T Consensus 251 D~G~~~dGY~sD~tRT~~V-g---~e~~~L~eav~eA~~aaI~~~kP-G~~~~dI~~ai~~~i~~~G~~l~g~~~~~~~v 325 (478)
T 1b6a_A 251 DFGTHISGRIIDCAFTVTF-N---PKYDTLLKAVKDATNTGIKCAGI-DVRLCDVGEAIQEVMESYEVEIDGKTYQVKPI 325 (478)
T ss_dssp EEEEEETTEEEEEEEEECS-S---GGGHHHHHHHHHHHHHHHHHCCT-TCBHHHHHHHHHHHHHTCEEEETTEEEECEEC
T ss_pred EEEEEECCEEEEEEEEEEe-C---HHHHHHHHHHHHHHHHHHHHhcC-CCCHHHHHHHHHHHHHHcCCCcccccccceee
Confidence 9999999999999999999 4 79999999999999999999999 99999999999 67777763 57
Q ss_pred cccccccC-CCCccCCCCCCCCCCCCCCcceecCCCCccccCCCCCCCCCCCCCcEEEeCCeeeEc
Q psy247 305 PHHSSHYL-GMDVHDCAAIPRTIPVAPGVVFTVEPGMDVHDCAAIPRTIPVAPGMVFTVEPGVYIS 369 (413)
Q Consensus 305 ~h~~GHgi-Gl~~~E~p~~~~~~~~~~g~~~~~~pg~~~~~~~~~~~~~~L~~GMv~~iEPgi~~~ 369 (413)
.|++||+| |+++||.|.++.+. .+...+|++||||+|||++|..
T Consensus 326 ~h~~GHGIGGl~iHE~P~vP~~~---------------------~~~~~~Le~GMVftIEP~i~~G 370 (478)
T 1b6a_A 326 RNLNGHSIGQYRIHAGKTVPIVK---------------------GGEATRMEEGEVYAIETFGSTG 370 (478)
T ss_dssp TTCEEEEEBTTBSCCSCEEESSS---------------------SCCCCBCCTTCEEEEEEEEESS
T ss_pred cCcceeCCCCccccCCCccceec---------------------CCCCCEeCCCCEEEEeCeeECC
Confidence 89999999 79999987765321 2356899999999999999854
No 31
>2nw5_A Methionine aminopeptidase 2; metap2, structural genomics, PSI-2, protein structure initiative; 2.18A {Encephalitozoon cuniculi} PDB: 3cmk_A* 3d0d_A* 3fm3_A 3fmq_A* 3fmr_A*
Probab=100.00 E-value=4.8e-36 Score=297.93 Aligned_cols=195 Identities=15% Similarity=0.104 Sum_probs=170.7
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHhccCCCCCHHHHHHHHHHHHHHcCCCCCCCCceeecCCCccccccccCCcccccCc
Q psy247 90 KSDSEQEMMRETCRIASEGFKETIGFSKPGRTEHELFTKFDYEVRMRGAQILAYPPVVASGDNANVIHYVHNNQKCCHGD 169 (413)
Q Consensus 90 Ks~~Ei~~~r~A~~i~~~~~~~~~~~~~~G~tE~el~~~~~~~~~~~G~~~~~~~~iv~sG~~~~~~~~~~~~~~~~~~~ 169 (413)
.|++||+.||+|++|+++++..+++.++||+||.||++.+++.++++|+...
T Consensus 42 ~s~~EI~~mR~A~~I~~~a~~~~~~~ikpG~te~El~~~ie~~~~~~g~~~~---------------------------- 93 (360)
T 2nw5_A 42 TESDILQDARRAAEAHRRARYRVQSIVRPGITLLEIVRSIEDSTRTLLKGER---------------------------- 93 (360)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHHHTTTSG----------------------------
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHhcCCCc----------------------------
Confidence 4999999999999999999999999999999999999999999999986521
Q ss_pred ceecccccCCCCCCHHHHHhhhHHHHHhhcccccCCCceeccCCCccccccccC----CccccCCCEEEEecceeeCcEE
Q psy247 170 LLLMDAGFSKPGRTEHELFTKFDYEVRMRGAQILAYPPVVASGDNANVIHYVHN----NQKCCHGDLLLMDAGCELNGYD 245 (413)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g~~~~~~h~~~~----~~~i~~Gd~v~iD~g~~~~GY~ 245 (413)
..+.+||++ +|.|.+++|+.|+ +++|++||+|+||+|+.|+||+
T Consensus 94 ------------------------------~~~~aFpt~--~s~N~~~~H~~P~~~d~~~~L~~GDlV~ID~G~~~~GY~ 141 (360)
T 2nw5_A 94 ------------------------------NNGIGFPAG--MSMNSCAAHYTVNPGEQDIVLKEDDVLKIDFGTHSDGRI 141 (360)
T ss_dssp ------------------------------GGGEEEEEE--EEETTEEECCCCCTTCCCCBCCTTCEEEEEEEEEETTEE
T ss_pred ------------------------------cCccccCce--eeccccccCCCCCcccCCcCcCCCCEEEEEEEEEECCEE
Confidence 012356665 4778899999998 7899999999999999999999
Q ss_pred eceEEEEeecCCCCHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHH--HHHHcCc---------ccccccccccCCC
Q psy247 246 SDITRTWPISGQFTDHQKVLYEIVLDTQLKLLKLCEKSDSALNFIYRYA--YVFQIGF---------KFCPHHSSHYLGM 314 (413)
Q Consensus 246 aDitRT~~v~G~~~~~~~~~~~~~~~a~~~~~~~lkp~G~~~~ei~~~~--~~~~~g~---------~~~~h~~GHgiGl 314 (413)
+|+|||+++ +++|+++|+++++|++++++++|| |++++||++++ .+.+.|+ ..+.|.+||+||+
T Consensus 142 sD~tRT~~v----~~~~~~l~~av~eA~~aai~~~kP-Gv~~~dI~~ai~~vi~~~G~~~~g~~~~~~~v~~~~GHgIG~ 216 (360)
T 2nw5_A 142 MDSAFTVAF----KENLEPLLVAAREGTETGIKSLGV-DVRVCDIGRDINEVISSYEVEIGGRMWPIRPISDLHGHSISQ 216 (360)
T ss_dssp EEEEEEEEC----CGGGHHHHHHHHHHHHHHHHHCCT-TCBHHHHHHHHHHHHTTCEEECSSSEEECEECTTCCEEEEBT
T ss_pred EEEEEEEEc----CHHHHHHHHHHHHHHHHHHHHhcC-CCcHHHHHHHHHHHHHHcCCccccccccccccCCeeEeeecC
Confidence 999999999 378999999999999999999999 99999999998 5666664 3568999999999
Q ss_pred -CccCCCCCCCCCCCCCCcceecCCCCccccCCCCCCCCCCCCCcEEEeCCeeeEcCC
Q psy247 315 -DVHDCAAIPRTIPVAPGVVFTVEPGMDVHDCAAIPRTIPVAPGMVFTVEPGVYISKD 371 (413)
Q Consensus 315 -~~~E~p~~~~~~~~~~g~~~~~~pg~~~~~~~~~~~~~~L~~GMv~~iEPgi~~~~~ 371 (413)
++||.|.+++.. .+++.+|++||||+|||++| ++.
T Consensus 217 y~iHe~P~I~~~~---------------------~~~~~~Le~GmV~aIEP~i~-~G~ 252 (360)
T 2nw5_A 217 FRIHGGISIPAVN---------------------NRDTTRIKGDSFYAVETFAT-TGK 252 (360)
T ss_dssp TBSCCSCEECSSC---------------------CCCCCBCCSSEEEEEEEEEE-SSC
T ss_pred ceeccCCEecccc---------------------CCCCcEEeCCcEEEEeceEE-CCc
Confidence 999999876321 23578999999999999998 554
No 32
>3fm3_A Methionine aminopeptidase 2; metap2, structural genomics, PSI-2, protein structure initiative; 2.18A {Encephalitozoon cuniculi} PDB: 3fmq_A* 3fmr_A*
Probab=100.00 E-value=1.5e-34 Score=287.86 Aligned_cols=200 Identities=15% Similarity=0.097 Sum_probs=164.7
Q ss_pred HHHHccCCHHHHHHHHHHHHHHHHHHHHHHhccCCCCCHHHHHHHHHHHHHHcCCCCCCCCceeecCCCccccccccCCc
Q psy247 84 HQLRLYKSDSEQEMMRETCRIASEGFKETIGFSKPGRTEHELFTKFDYEVRMRGAQILAYPPVVASGDNANVIHYVHNNQ 163 (413)
Q Consensus 84 ~~~R~vKs~~Ei~~~r~A~~i~~~~~~~~~~~~~~G~tE~el~~~~~~~~~~~G~~~~~~~~iv~sG~~~~~~~~~~~~~ 163 (413)
.++|.+|+++||+.||+|++|++++++.+.+.++||||+.||.+.+++.+++.|+... +
T Consensus 34 ~~~~~~~~~d~l~~~R~Aa~I~~~v~~~~~~~ikpG~t~~el~~~~e~~i~~~~~~~~-~-------------------- 92 (358)
T 3fm3_A 34 MEIENFTESDILQDARRAAEAHRRARYRVQSIVRPGITLLEIVRSIEDSTRTLLKGER-N-------------------- 92 (358)
T ss_dssp CEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHHHTTTSG-G--------------------
T ss_pred HHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHhcCCCc-c--------------------
Confidence 5689999999999999999999999999999999999999999999999999986521 0
Q ss_pred ccccCcceecccccCCCCCCHHHHHhhhHHHHHhhcccccCCCceeccCCCcccccccc----CCccccCCCEEEEecce
Q psy247 164 KCCHGDLLLMDAGFSKPGRTEHELFTKFDYEVRMRGAQILAYPPVVASGDNANVIHYVH----NNQKCCHGDLLLMDAGC 239 (413)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g~~~~~~h~~~----~~~~i~~Gd~v~iD~g~ 239 (413)
.+.+|| +|++.|.++.|+.| ++++|++||+|.||+|+
T Consensus 93 -------------------------------------~g~~FP--~ciSvN~~v~Hg~P~~~~~~~~L~~GDiV~ID~G~ 133 (358)
T 3fm3_A 93 -------------------------------------NGIGFP--AGMSMNSCAAHYTVNPGEQDIVLKEDDVLKIDFGT 133 (358)
T ss_dssp -------------------------------------GGEEEE--EEEEETTEEECCCCCTTCCCCBCCTTCEEEEEEEE
T ss_pred -------------------------------------cCCCCC--cEEeeCCEEEecCCCCCCCCeEecCCCEEEEEeeE
Confidence 123566 46677888899988 47899999999999999
Q ss_pred eeCcEEeceEEEEeecCCCCHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHH--HHHHcCc---------ccccccc
Q psy247 240 ELNGYDSDITRTWPISGQFTDHQKVLYEIVLDTQLKLLKLCEKSDSALNFIYRYA--YVFQIGF---------KFCPHHS 308 (413)
Q Consensus 240 ~~~GY~aDitRT~~v~G~~~~~~~~~~~~~~~a~~~~~~~lkp~G~~~~ei~~~~--~~~~~g~---------~~~~h~~ 308 (413)
.++||++|++||+++ |+. ..++++.+.+++.+++++++| |+++.++..++ .+.+.++ ....+.+
T Consensus 134 ~~dGY~sD~arT~~v-g~~---~~~l~~~~~~al~aai~~~~p-G~~~~dig~ai~~v~~~~~~~v~~~~~~~~~v~~~~ 208 (358)
T 3fm3_A 134 HSDGRIMDSAFTVAF-KEN---LEPLLVAAREGTETGIKSLGV-DVRVCDIGRDINEVISSYEVEIGGRMWPIRPISDLH 208 (358)
T ss_dssp EETTEEEEEEEEEEC-CGG---GHHHHHHHHHHHHHHHHHCCT-TCBHHHHHHHHHHHHTTCEEECSSSEEECEECTTCC
T ss_pred EECCEEEEEEEeccc-ccc---chhHHHHHHHHHHHHHHhhhc-CCccccccHHHHHHHhhccceecccccccccccccc
Confidence 999999999999999 543 346678888999999999999 99999999988 4444443 1235677
Q ss_pred cccCCC-CccCCCCCCCCCCCCCCcceecCCCCccccCCCCCCCCCCCCCcEEEeCCeeeEc
Q psy247 309 SHYLGM-DVHDCAAIPRTIPVAPGVVFTVEPGMDVHDCAAIPRTIPVAPGMVFTVEPGVYIS 369 (413)
Q Consensus 309 GHgiGl-~~~E~p~~~~~~~~~~g~~~~~~pg~~~~~~~~~~~~~~L~~GMv~~iEPgi~~~ 369 (413)
||+||. ..|+.|.+++.. .+...+|++||||+|||.+...
T Consensus 209 GHgiG~~~~he~~~ip~~~---------------------~~~~~~le~GmV~tIEP~is~G 249 (358)
T 3fm3_A 209 GHSISQFRIHGGISIPAVN---------------------NRDTTRIKGDSFYAVETFATTG 249 (358)
T ss_dssp EEEEBTTBSCCSCEECSSC---------------------CCCCCBCCSSEEEEEEEEEESS
T ss_pred ccccCCccccCCCccCccC---------------------CCCCcEEeeeeeEEeeeeeecC
Confidence 888885 568888776432 2346789999999999988643
No 33
>4b6a_t Probable metalloprotease ARX1; large ribosomal subunit, ribosome biogenesis, ribosome matur factor, ribosome; 8.10A {Saccharomyces cerevisiae}
Probab=99.50 E-value=2.2e-13 Score=140.59 Aligned_cols=177 Identities=15% Similarity=0.081 Sum_probs=132.9
Q ss_pred HHccCCHHHHHHHHHHHHHHHHHHHHHHhcc---------CCCCCHHHHHHHHHHHHHHcCCCCCCCCceeecCCCcccc
Q psy247 86 LRLYKSDSEQEMMRETCRIASEGFKETIGFS---------KPGRTEHELFTKFDYEVRMRGAQILAYPPVVASGDNANVI 156 (413)
Q Consensus 86 ~R~vKs~~Ei~~~r~A~~i~~~~~~~~~~~~---------~~G~tE~el~~~~~~~~~~~G~~~~~~~~iv~sG~~~~~~ 156 (413)
-+.+-+++-+..+|.|++|+.++++.+...+ +||++-.||....+..+.+.+++ .|.. .
T Consensus 37 ekniln~dvltKYr~AgeIa~~vLk~v~~li~~G~~~~~~kpga~I~ELCe~GD~~I~e~~ak--vyk~-----K----- 104 (614)
T 4b6a_t 37 DKNILQESVLNKYRTAGQIAQTALKYVTSLINDSYHSKTTQRQLTVPELCLLTDSFILTRLEQ--YYKN-----K----- 104 (614)
T ss_dssp CSSSSCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHTTCCCBTTHHHHHHHHHHHHHHHT--SSTT-----C-----
T ss_pred ccccCCHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCCCCcHHHHHHHHHHHHHHHHHh--hhcC-----C-----
Confidence 3456688889999999999999999998876 56688889998888888877654 1210 0
Q ss_pred ccccCCcccccCcceecccccCCCCCCHHHHHhhhHHHHHhhcccccCCCceeccCCCccccccccC-------------
Q psy247 157 HYVHNNQKCCHGDLLLMDAGFSKPGRTEHELFTKFDYEVRMRGAQILAYPPVVASGDNANVIHYVHN------------- 223 (413)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g~~~~~~h~~~~------------- 223 (413)
. --.+.+|| +|.+.|.++.||.|+
T Consensus 105 -------~----------------------------------~~KGIAFP--T~ISvN~~vaHysP~~~D~~~~~~~~~~ 141 (614)
T 4b6a_t 105 -------V----------------------------------NERGIAIP--TTIDIDQISGGWCPEIDDTQNLLNWNKG 141 (614)
T ss_dssp -------S----------------------------------CCEEEEEE--EEEEETTEEECCCCCTTS----------
T ss_pred -------c----------------------------------ccCCCccC--ceecHHHcccCCCCCCcchhhccccccc
Confidence 0 01234555 455678888899984
Q ss_pred ---------CccccCCCEEEEecceeeCcEEeceEEEEeecCC-------------CCHHHHHHHHHHHHHHHHHHHhc-
Q psy247 224 ---------NQKCCHGDLLLMDAGCELNGYDSDITRTWPISGQ-------------FTDHQKVLYEIVLDTQLKLLKLC- 280 (413)
Q Consensus 224 ---------~~~i~~Gd~v~iD~g~~~~GY~aDitRT~~v~G~-------------~~~~~~~~~~~~~~a~~~~~~~l- 280 (413)
+..|+.||+|.||+|+..+||.+|.+.|+.+ |. .+....++..++..|.+.++.++
T Consensus 142 ~~~~~~~~~~~vLk~GDVVKIDLGvHIDGyiadvA~Tvvv-g~~~~~~~~~~~~~pvtGrkADli~AA~~A~EaalrLl~ 220 (614)
T 4b6a_t 142 KDSTFASSVTGTLRPGDLVKITLGVHIDGYTSEVSHTMVI-YPVDETKPILQPTGPLLGGKADAVAAAHIAMETVVALLA 220 (614)
T ss_dssp --------CCCBCCTTCEEEEEEEEEETTEEEEEEEEEEC-CCCTTTSTTTTTTSCBCHHHHHHHHHHHHHHHHHHHHC-
T ss_pred ccccccccccccccCCCEEEEEeeEEECCeEEEEEEEEEE-CCcccccccccccccccchhhhHHHHHHHHHHHHHHHHh
Confidence 2369999999999999999999999999999 42 34455567777777777777766
Q ss_pred ---------------ccCCCCHHHHHHHH--HHHHcCcccccccccccCCCCccCC
Q psy247 281 ---------------EKSDSALNFIYRYA--YVFQIGFKFCPHHSSHYLGMDVHDC 319 (413)
Q Consensus 281 ---------------kp~G~~~~ei~~~~--~~~~~g~~~~~h~~GHgiGl~~~E~ 319 (413)
+| |++..+|-..+ .....++......+||.|+-.+.+.
T Consensus 221 ~~~~~e~l~a~l~~~~~-gvt~~~It~~IekvaksY~ck~Vegl~sH~i~r~~i~g 275 (614)
T 4b6a_t 221 CALTPEKLPASLGGTSS-GITGQLIRTIVDTIARSYNCGVVPGSRVRRIRRFLAGQ 275 (614)
T ss_dssp ---------------ST-TCBHHHHHHHHHHHHHTTTCEECTTCEEEEEBTTBSSC
T ss_pred hccchhhhhhhhhccCC-CcchHHHHHHHHHHHhcCCcEEecccccccccceecCC
Confidence 88 99999988887 4445566667778889888554443
No 34
>4fuk_A Methionine aminopeptidase; structural genomics consortium, SGC, hydrolase; 1.75A {Trypanosoma brucei brucei}
Probab=98.85 E-value=1e-11 Score=122.34 Aligned_cols=187 Identities=13% Similarity=0.103 Sum_probs=109.2
Q ss_pred HHcCCCCCCCCceeecCCCccccccccCCcccccCcceecccccCCCCCCHHHHHhhhHHHHHhhcccccCCCceeccCC
Q psy247 134 RMRGAQILAYPPVVASGDNANVIHYVHNNQKCCHGDLLLMDAGFSKPGRTEHELFTKFDYEVRMRGAQILAYPPVVASGD 213 (413)
Q Consensus 134 ~~~G~~~~~~~~iv~sG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g~ 213 (413)
+..+....+|++++++|.|++.+|+.++++.++.||+++||.|+...++. .|+++||.+. .
T Consensus 113 ~~~~~~~~~fp~iv~~g~n~~~~H~~~~~~~l~~GD~v~iD~g~~~~GY~-sD~tRT~~vG------------------~ 173 (337)
T 4fuk_A 113 YPSPLNYYGFPKSVCTSVNEVICHGIPDSRELEEGDILNIDVSSYLNGFH-GDLNETVFIG------------------R 173 (337)
T ss_dssp EETTTTGGGCCSSSEEEETTEEECCCCCSCBCCTTCEEEEEEEEEETTEE-EEEEEEEESS------------------S
T ss_pred CccCCCCCCcCceeeccccccccCCCCCCccccCCCEEEEecceeECCEE-EeeeeeEEeC------------------C
Confidence 34456667899999999999999999999999999999999999998853 5565555321 0
Q ss_pred CccccccccCCccccCCCEEEEecceeeCcEEeceEEEEeecCCCCHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHH
Q psy247 214 NANVIHYVHNNQKCCHGDLLLMDAGCELNGYDSDITRTWPISGQFTDHQKVLYEIVLDTQLKLLKLCEKSDSALNFIYRY 293 (413)
Q Consensus 214 ~~~~~h~~~~~~~i~~Gd~v~iD~g~~~~GY~aDitRT~~v~G~~~~~~~~~~~~~~~a~~~~~~~lkp~G~~~~ei~~~ 293 (413)
- ++.. + +.-+..+++.+.+.++.+.+...-.. +....++...
T Consensus 174 ~--------~~~~-~----------------------------~l~~~v~ea~~~ai~~~kpG~~~~di-~~~~~~~~~~ 215 (337)
T 4fuk_A 174 P--------DDDS-V----------------------------RLVHAAYECLCAGIGVVKPEALYKQV-GDAIEACASQ 215 (337)
T ss_dssp C--------CHHH-H----------------------------HHHHHHHHHHHHHHTTCSTTCBTTHH-HHHHHHHHHT
T ss_pred c--------cHHH-H----------------------------HHHHHHHHHHHHHHhhccccccHHHH-HHHHHHHHHH
Confidence 0 0000 0 00011111111111111111111111 1111222221
Q ss_pred HHHHHcCcccccccccccCCCCccCCCCCCC--CCCCCCCcceecCCCCccccCCC--CCCCCCC---CCCcEEEeCCee
Q psy247 294 AYVFQIGFKFCPHHSSHYLGMDVHDCAAIPR--TIPVAPGVVFTVEPGMDVHDCAA--IPRTIPV---APGMVFTVEPGV 366 (413)
Q Consensus 294 ~~~~~~g~~~~~h~~GHgiGl~~~E~p~~~~--~~~~~~g~~~~~~pg~~~~~~~~--~~~~~~L---~~GMv~~iEPgi 366 (413)
. ....-..++.|++||.++.+.+..+.... ...|.|||+||||||+|...... ..+..++ .-+..+.||-.+
T Consensus 216 ~-g~~~~~~~~GHGIG~~~he~p~~~~~~~~~~~~~L~~GMV~TIEPgiy~~~~~~~~~~D~wt~~t~dg~~gvriEd~V 294 (337)
T 4fuk_A 216 Y-QCSVVRTYTGHGVGHLFHTSPTVCHYANNKSLGMMRPGHVFTIEPMINLGTWQDVTWPDKWTSTTKDGRRSAQFEHTM 294 (337)
T ss_dssp T-TCEECSSEEEEECSSSSSEEEEECCSCC---CCBCCTTCEEEECCEEESSCSCEEECTTSSCEEETTCCCEEECBEEE
T ss_pred h-cCCcccCcccCCCCCccccCCcccccccCCCCCEeCCCCEEEECCeeEcCCCcceEcCCCCeEEecCCceEEEeccEE
Confidence 1 00111257899999999999988876543 35689999999999999765421 1111111 123477899999
Q ss_pred eEcCCCCCcccc
Q psy247 367 YISKDCKETRPE 378 (413)
Q Consensus 367 ~~~~~~~~~~~~ 378 (413)
.+.+++..+++.
T Consensus 295 lVTe~G~EvLT~ 306 (337)
T 4fuk_A 295 VVTNGGVEIFTD 306 (337)
T ss_dssp EECSSSEEESSC
T ss_pred EEcCCcCEECCC
Confidence 988874444433
No 35
>3tb5_A Methionine aminopeptidase; hydrolase, metalloprotease, enter feacalis; HET: CIT; 2.30A {Enterococcus faecalis}
Probab=98.57 E-value=7.5e-10 Score=105.11 Aligned_cols=177 Identities=12% Similarity=0.037 Sum_probs=101.6
Q ss_pred CCCCceeecCCCccccccccCCcccccCcceecccccCCCCCCHHHHHhhhHHHHHhhcccccCCCceeccCCCcccccc
Q psy247 141 LAYPPVVASGDNANVIHYVHNNQKCCHGDLLLMDAGFSKPGRTEHELFTKFDYEVRMRGAQILAYPPVVASGDNANVIHY 220 (413)
Q Consensus 141 ~~~~~iv~sG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g~~~~~~h~ 220 (413)
..|++++++|.|++.+|+.++++.++.||++++|.|+...++ .+|++|||.+. ....-+..-|..+..+...
T Consensus 61 ~~~~~~v~~g~~~~~~H~~~~~~~l~~Gdlv~iD~g~~~~GY-~sD~tRT~~vG-~~~~~~~~l~~~v~~a~~~------ 132 (264)
T 3tb5_A 61 EGYKYATCCSINDEICHGFPRKKVLKDGDLIKVDMCVDLKGA-ISDSCWSYVVG-ESTPEIDRLMEVTKKALYL------ 132 (264)
T ss_dssp GGCCCSEEEEETTEEECCCCCSCBCCTTCEEEEEEEEEETTE-EEEEEEEEECS-SCCHHHHHHHHHHHHHHHH------
T ss_pred cCCCcceEECCcccccCCCCCCccccCCCEEEEeccceecce-eeecccccccC-CccHHHHHHHHHHHHHHHH------
Confidence 468889999999999999999999999999999999998885 46777776431 0000000001000000000
Q ss_pred ccCCccccCCCEEEEecceeeCcEEeceEEEEeecCCCCHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHcC
Q psy247 221 VHNNQKCCHGDLLLMDAGCELNGYDSDITRTWPISGQFTDHQKVLYEIVLDTQLKLLKLCEKSDSALNFIYRYAYVFQIG 300 (413)
Q Consensus 221 ~~~~~~i~~Gd~v~iD~g~~~~GY~aDitRT~~v~G~~~~~~~~~~~~~~~a~~~~~~~lkp~G~~~~ei~~~~~~~~~g 300 (413)
.-..+++|- ...++++++.+. ++.. |- ..-
T Consensus 133 --~i~~~kpG~-----------------------------~~~di~~a~~~~----~~~~---g~------------~~~ 162 (264)
T 3tb5_A 133 --GIEQAQVGN-----------------------------RIGDIGHAIQTY----VEGE---GY------------GVV 162 (264)
T ss_dssp --HHHTCCTTC-----------------------------BHHHHHHHHHHH----HHHT---TC------------EEC
T ss_pred --HHhhhCCCC-----------------------------CHHHHHHHHHHH----HHHc---CC------------cee
Confidence 001122221 011222221111 1111 11 111
Q ss_pred cccccccccccCCCCccCCCCCC--CCCCCCCCcceecCCCCccccCCC--CCCCCCC---CCCcEEEeCCeeeEcCCCC
Q psy247 301 FKFCPHHSSHYLGMDVHDCAAIP--RTIPVAPGVVFTVEPGMDVHDCAA--IPRTIPV---APGMVFTVEPGVYISKDCK 373 (413)
Q Consensus 301 ~~~~~h~~GHgiGl~~~E~p~~~--~~~~~~~g~~~~~~pg~~~~~~~~--~~~~~~L---~~GMv~~iEPgi~~~~~~~ 373 (413)
..++.|++||.++...+..+... +...|.|||+||+|||+|+..... ..+..++ --|..+.||-.+.+.+++.
T Consensus 163 ~~~~GHgiG~~~~e~p~i~~~~~~~~~~~L~~Gmv~tiEPgiy~~~~~~~~~~d~wt~~~~~g~~gvriEd~vlVT~~G~ 242 (264)
T 3tb5_A 163 RDFVGHGIGPTIHESPMIPHYGEAGKGLRLKEGMVITIEPMVNTGTWRMKMDPNGWTAYTEDGGLSCQYEHSLAITKEGP 242 (264)
T ss_dssp CSCCEEECSSSSSEEEEECSSCCTTCSCBCCTTCEEEECCEEESSCSCEEECTTSSCEEETTCCCEEECCEEEECCTTCC
T ss_pred eeceecCCCCCCccCCccCccccCCCCCCccCCcEEEEeeeEEcCCCceEEcCCCCeEEecCCccEEEeceEEEEcCCcC
Confidence 24678999999998776554432 235789999999999998655421 0111111 1245788999998887743
Q ss_pred Cc
Q psy247 374 ET 375 (413)
Q Consensus 374 ~~ 375 (413)
.+
T Consensus 243 e~ 244 (264)
T 3tb5_A 243 RI 244 (264)
T ss_dssp EE
T ss_pred EE
Confidence 33
No 36
>3l24_A XAA-Pro dipeptidase; PITA-bread, detoxification, hydrolase, manganese, metal-binding, metalloprotease, protease; 2.30A {Alteromonas SP} PDB: 3l7g_A*
Probab=98.37 E-value=2.7e-08 Score=102.77 Aligned_cols=50 Identities=26% Similarity=0.506 Sum_probs=43.7
Q ss_pred CCceeecCCCccccccccCCcc-cccCcceecccccCCCCCCHHHHHhhhHH
Q psy247 143 YPPVVASGDNANVIHYVHNNQK-CCHGDLLLMDAGFSKPGRTEHELFTKFDY 193 (413)
Q Consensus 143 ~~~iv~sG~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (413)
|++||++|.|++.+|+.++++. ++.||++++|+|+.+.++ .+|+++||.+
T Consensus 212 f~~IVasG~naa~~H~~p~~~~~l~~GDlVliD~G~~~~GY-~sDiTRT~~v 262 (517)
T 3l24_A 212 YGNIVALNENCAILHYTHFDRVAPATHRSFLIDAGANFNGY-AADITRTYDF 262 (517)
T ss_dssp SCCEEEEGGGGGCTTCCCCCSSCCSSCCEEEEEEEEEETTE-EEEEEEEEES
T ss_pred cCCEEEEccccccccCCCCCCccccCCCEEEEeecEEECCE-EEEeEEEEEc
Confidence 6899999999999999999885 689999999999998874 5788887754
No 37
>1chm_A Creatine amidinohydrolase; creatinase; 1.90A {Pseudomonas putida} SCOP: c.55.2.1 d.127.1.1
Probab=98.27 E-value=6.1e-08 Score=97.41 Aligned_cols=51 Identities=20% Similarity=0.098 Sum_probs=43.0
Q ss_pred CCCCc--eeecCCCccccccccCCcccccCcceecccccCCCCCCHHHHHhhhH
Q psy247 141 LAYPP--VVASGDNANVIHYVHNNQKCCHGDLLLMDAGFSKPGRTEHELFTKFD 192 (413)
Q Consensus 141 ~~~~~--iv~sG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (413)
..|.+ ++++|.|++.+|+.++++.++.||++++|.|+.+.++. +|++|||.
T Consensus 213 ~~~~~~~~~~~g~n~~~~H~~~~~~~l~~gd~v~iD~G~~~~gY~-sD~tRT~~ 265 (401)
T 1chm_A 213 ELMDTWTWFQSGINTDGAHNPVTTRKVNKGDILSLNCFPMIAGYY-TALERTLF 265 (401)
T ss_dssp CBCCCEEEEEEGGGGGSTTCCEESCBCCTTCEEEEEEECEETTEE-CCEEEEEE
T ss_pred cccCcceeeeecccccccccCCCCCccCCCCEEEEEEEEeeCCEe-ecceEEEE
Confidence 45666 47999999999999999999999999999999988854 66766653
No 38
>3tav_A Methionine aminopeptidase; ssgcid, seattle structural genomics center for infectious DI protease, hydrolase; 2.15A {Mycobacterium abscessus}
Probab=98.18 E-value=4e-08 Score=94.34 Aligned_cols=52 Identities=23% Similarity=0.350 Sum_probs=44.5
Q ss_pred CCCCceeecCCCccccccccC-CcccccCcceecccccCCCCCCHHHHHhhhHH
Q psy247 141 LAYPPVVASGDNANVIHYVHN-NQKCCHGDLLLMDAGFSKPGRTEHELFTKFDY 193 (413)
Q Consensus 141 ~~~~~iv~sG~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (413)
.+|++++++|.|++.+|+.++ ++.++.||++++|.|+.+.++ .+|+++||.+
T Consensus 91 ~~f~~iv~~g~n~~~~H~~p~~~~~l~~Gd~v~iD~G~~~~GY-~sD~tRT~~v 143 (286)
T 3tav_A 91 HGFPASICSSVNDQVVHGIPSATAVLADGDLVSIDCGAILDGW-HGDSAWTFAV 143 (286)
T ss_dssp GGCCSSEEEEETTBCSCCCCCTTCBCCTTCEEEEEEEEEETTE-EEEEEEEEES
T ss_pred CCCCCceEEecCccccCCCCCCCcccCCCCEEEEEEEEEECCE-EEeeEEEEEC
Confidence 478999999999999999999 899999999999999998774 3666666543
No 39
>1qxy_A Methionyl aminopeptidase; PITA bread fold, hydrolase; HET: M2C; 1.04A {Staphylococcus aureus} SCOP: d.127.1.1 PDB: 1qxw_A* 1qxz_A*
Probab=98.15 E-value=3.6e-08 Score=92.74 Aligned_cols=51 Identities=22% Similarity=0.231 Sum_probs=43.8
Q ss_pred CCCceeecCCCccccccccCCcccccCcceecccccCCCCCCHHHHHhhhHH
Q psy247 142 AYPPVVASGDNANVIHYVHNNQKCCHGDLLLMDAGFSKPGRTEHELFTKFDY 193 (413)
Q Consensus 142 ~~~~iv~sG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (413)
+|++++++|.|++.+|+.++++.++.||++++|.|+.+.++ .+|+++||.+
T Consensus 61 ~f~~~v~~g~n~~~~H~~p~~~~l~~gd~v~iD~g~~~~gy-~sD~tRT~~v 111 (252)
T 1qxy_A 61 NFPGQTCISVNEEVAHGIPSKRVIREGDLVNIDVSALKNGY-YADTGISFVV 111 (252)
T ss_dssp CCSSSSEEEETTEEECCCCCSCBCCTTCEEEEEEEEEETTE-EEEEEEEEEC
T ss_pred CCCcceEEcCCccccCCCCCCcCcCCCCEEEEEeeEEECCE-EEEEEEEEEc
Confidence 58889999999999999999999999999999999988774 4666666543
No 40
>4fkc_A XAA-Pro aminopeptidase; PITA-bread structure, prolidase, hydrolase; 2.60A {Thermococcus sibiricus}
Probab=98.11 E-value=3e-07 Score=91.45 Aligned_cols=46 Identities=28% Similarity=0.395 Sum_probs=39.9
Q ss_pred ceeecCCCccccccccCCcccccCcceecccccCCCCCCHHHHHhhh
Q psy247 145 PVVASGDNANVIHYVHNNQKCCHGDLLLMDAGFSKPGRTEHELFTKF 191 (413)
Q Consensus 145 ~iv~sG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (413)
+|+++|+|++.+|+.++++.++.||++++|.|+.+.++ .+|++|||
T Consensus 207 ~iv~~G~n~~~~H~~~~~~~l~~gd~v~iD~g~~~~gy-~sD~tRT~ 252 (377)
T 4fkc_A 207 PIVASGPNGANPHHRPSHRKIRKGDVVIFDYGAKYLGY-CSDVTRTV 252 (377)
T ss_dssp CEEEEGGGGGCTTCCCCSCBCCTTCEEEEEECEEETTE-ECCEEEEE
T ss_pred ccccccccccccccccccccccccccccccccccccCc-ccccceeE
Confidence 58999999999999999999999999999999988774 35565554
No 41
>1kp0_A Creatine amidinohydrolase; alpha betal, 3-layer(ABA) sandwich; 2.70A {Actinobacillus} SCOP: c.55.2.1 d.127.1.1
Probab=98.00 E-value=9.9e-07 Score=88.39 Aligned_cols=50 Identities=18% Similarity=0.010 Sum_probs=41.6
Q ss_pred CCCceeecCCCccccccccCCcccccCcceecccccCCCCCCHHHHHhhhH
Q psy247 142 AYPPVVASGDNANVIHYVHNNQKCCHGDLLLMDAGFSKPGRTEHELFTKFD 192 (413)
Q Consensus 142 ~~~~iv~sG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (413)
.+.+++++|.|++.+|+.++++.++.||++++|.|+.+.++. +|+++||.
T Consensus 216 ~~~~iv~~g~n~~~~H~~~~~~~l~~gd~v~iD~g~~~~gy~-sD~tRT~~ 265 (402)
T 1kp0_A 216 DTWIWFQSGINTDGAHNPVTBRVVZRGDILSLNCFPMIFGYY-TALERTLF 265 (402)
T ss_dssp EEEEEEEEGGGGGSTTCCEECCBCCTTCEEEEEEEEEETTEE-CCEEEEEE
T ss_pred CccceeecccccccccCCCCCcccCCCCEEEEEEEeeECCEe-eecEEEEE
Confidence 345689999999999999999999999999999999887753 45665553
No 42
>2b3h_A Methionine aminopeptidase 1; hydrolase, metalloprotease, pitab; HET: GOL; 1.10A {Homo sapiens} PDB: 2b3k_A 2b3l_A 2gz5_A* 2nq6_A* 2nq7_A* 2g6p_A*
Probab=97.99 E-value=9.6e-08 Score=93.50 Aligned_cols=51 Identities=18% Similarity=0.308 Sum_probs=43.9
Q ss_pred CCCCceeecCCCccccccccCCcccccCcceecccccCCCCCCHHHHHhhhH
Q psy247 141 LAYPPVVASGDNANVIHYVHNNQKCCHGDLLLMDAGFSKPGRTEHELFTKFD 192 (413)
Q Consensus 141 ~~~~~iv~sG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (413)
.+|++++++|.|++++|+.++++.++.||++++|.|+.+.++ .+|+++||.
T Consensus 132 ~~fp~iv~sg~n~~~~H~~p~~~~L~~GDiv~iD~G~~~~GY-~sD~tRT~~ 182 (329)
T 2b3h_A 132 YNFPKSCCTSVNEVICHGIPDRRPLQEGDIVNVDITLYRNGY-HGDLNETFF 182 (329)
T ss_dssp GGCCSSSEEEETTEEECCCCCSCBCCTTCEEEEEEEEEETTE-EEEEEEEEE
T ss_pred cCCCCeEEecCCCCcCCCCCCCcCCCCCCEEEEEeeEEECCE-EEeeEEEEE
Confidence 479999999999999999999999999999999999988764 355555553
No 43
>3pka_A Methionine aminopeptidase; hydrolase-hydrolase inhibitor complex; HET: Y02; 1.25A {Mycobacterium tuberculosis} PDB: 3pkb_A* 3pkc_A* 3pkd_A* 3pke_A* 3iu7_A* 3iu8_A* 3iu9_A* 1y1n_A 1yj3_A 3ror_A
Probab=97.92 E-value=2e-07 Score=89.46 Aligned_cols=51 Identities=16% Similarity=0.236 Sum_probs=43.8
Q ss_pred CCCCceeecCCCccccccccCCcccccCcceecccccCCCCCCHHHHHhhhH
Q psy247 141 LAYPPVVASGDNANVIHYVHNNQKCCHGDLLLMDAGFSKPGRTEHELFTKFD 192 (413)
Q Consensus 141 ~~~~~iv~sG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (413)
.+|++++++|.|++.+|+.++++.++.||++++|.|+.+.++ .+|+++||.
T Consensus 98 ~~f~~iv~~g~n~~~~H~~p~~~~l~~Gd~v~iD~G~~~~GY-~sD~tRT~~ 148 (285)
T 3pka_A 98 KGFPKSCCTSLNEVICHGIPDSTVITDGDIVNIDVTAYIGGV-HGDTNATFP 148 (285)
T ss_dssp GGCCSSSEEEETTEEECCCCCSCBCCTTCEEEEEEEEEETTE-EEEEEEEEE
T ss_pred cCCCCceEecccceeecCCCCCcccCCCCEEEEEEEEEECCE-EEEEEEEEE
Confidence 468999999999999999999999999999999999988775 356666553
No 44
>3s6b_A Methionine aminopeptidase; malaria, proteolysis, "PITA bread" fold, structur genomics, structural genomics consortium, SGC, hydrolase; 1.95A {Plasmodium falciparum}
Probab=97.91 E-value=2.8e-07 Score=91.28 Aligned_cols=51 Identities=18% Similarity=0.281 Sum_probs=43.6
Q ss_pred CCCCCceeecCCCccccccccCCcccccCcceecccccCCCCCCHHHHHhhh
Q psy247 140 ILAYPPVVASGDNANVIHYVHNNQKCCHGDLLLMDAGFSKPGRTEHELFTKF 191 (413)
Q Consensus 140 ~~~~~~iv~sG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (413)
..+|++++++|.|++.+|+.++++.++.||+++||.|+...++ .+|+++||
T Consensus 159 y~~Fp~iv~sg~N~~i~H~~p~~r~L~~GDiV~iD~G~~~~GY-~sDitRT~ 209 (368)
T 3s6b_A 159 YYKFPKSCCTSVNEIVCHGIPDYRPLKSGDIINIDISVFYKGV-HSDLNETY 209 (368)
T ss_dssp GGGCCSSEEEEETTEEECCCCCSCBCCTTCEEEEEEEEEETTE-EEEEEEEE
T ss_pred ccCCCCeEEEcCccccccCCCCCccccCCCEEEEEEeEEECcE-EEEEEEEE
Confidence 3579999999999999999999999999999999999988774 35555554
No 45
>1o0x_A Methionine aminopeptidase; TM1478, structural genomics, JCSG, PSI, protein structure initiative, joint center for structural genomics; 1.90A {Thermotoga maritima} SCOP: d.127.1.1
Probab=97.85 E-value=4.8e-07 Score=85.65 Aligned_cols=52 Identities=19% Similarity=0.205 Sum_probs=44.3
Q ss_pred CCCCceeecCCCccccccccCCcc-cccCcceecccccCCCCCCHHHHHhhhHH
Q psy247 141 LAYPPVVASGDNANVIHYVHNNQK-CCHGDLLLMDAGFSKPGRTEHELFTKFDY 193 (413)
Q Consensus 141 ~~~~~iv~sG~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (413)
.+|++++++|.|++.+|+.++++. ++.||++++|.|+.+.++ .+|+++||.+
T Consensus 73 ~~f~~~v~~g~n~~~~H~~p~~~~~l~~Gd~v~iD~G~~~~GY-~sD~tRT~~v 125 (262)
T 1o0x_A 73 GGYKYATCVSVNEEVVHGLPLKEKVFKEGDIVSVDVGAVYQGL-YGDAAVTYIV 125 (262)
T ss_dssp GGCCCSEEEEETTBCSCCCCCTTCBCCTTCEEEEEEEEEETTE-EEEEEEEEES
T ss_pred cCCCcceEecccccccCCCCCCCcccCCCCEEEEEEEEEECCE-EEEEEEEEEC
Confidence 368899999999999999999999 999999999999998775 4666666543
No 46
>3cb6_A FACT complex subunit SPT16; peptidase homology domain, histone binding module, histone H chaperone, PITA-bread fold; 1.84A {Schizosaccharomyces pombe} PDB: 3cb5_A
Probab=97.85 E-value=1.3e-06 Score=88.83 Aligned_cols=52 Identities=17% Similarity=0.356 Sum_probs=44.9
Q ss_pred CCCCCceeecCCCcc-ccccccCCcccccCcceecccccCCCCCCHHHHHhhhHH
Q psy247 140 ILAYPPVVASGDNAN-VIHYVHNNQKCCHGDLLLMDAGFSKPGRTEHELFTKFDY 193 (413)
Q Consensus 140 ~~~~~~iv~sG~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (413)
..+|++|+++|.|++ .+|+.++++.++ ||++++|.|+.+.+ +.+|++|||.+
T Consensus 250 ~~~f~~iv~~g~n~~~~~H~~~~~~~l~-gd~v~iD~g~~~~g-y~sD~tRT~~v 302 (444)
T 3cb6_A 250 EWCYTPIIQSGGSYDLKPSAITDDRNLH-GDVVLCSLGFRYKS-YCSNVGRTYLF 302 (444)
T ss_dssp EESSCCEEECTTCCCCSTTCCCCSSBCC-SSEEEEEECEEETT-EECCEEEEEEE
T ss_pred ccccCceEeccCCcCceeccCCCCCccc-CCEEEEEEeEeeCC-EeeeeeEEEEe
Confidence 478999999999999 999999999998 99999999999877 45677766643
No 47
>2gg2_A Methionine aminopeptidase; PITA-bread fold, MAP inhibitor, antibacterial, hydrolase; HET: U12; 1.00A {Escherichia coli K12} SCOP: d.127.1.1 PDB: 2gg0_A* 2gg3_A* 2gg5_A* 2gg7_A* 2gg8_A* 2gg9_A* 2ggb_A* 2ggc_A 2q93_A* 2q95_A* 2q96_A* 1xnz_A* 1mat_A* 2bb7_A* 2evc_A* 2evm_A* 2evo_A* 3mat_A* 1yvm_A* 2mat_A ...
Probab=97.80 E-value=6.5e-07 Score=84.68 Aligned_cols=51 Identities=24% Similarity=0.274 Sum_probs=43.7
Q ss_pred CCCCceeecCCCccccccccCC-cccccCcceecccccCCCCCCHHHHHhhhH
Q psy247 141 LAYPPVVASGDNANVIHYVHNN-QKCCHGDLLLMDAGFSKPGRTEHELFTKFD 192 (413)
Q Consensus 141 ~~~~~iv~sG~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (413)
.+|++++++|.|++.+|+.+++ +.++.||++++|.|+.+.++ .+|+++||.
T Consensus 62 ~~f~~iv~~g~n~~~~H~~p~~~~~l~~gd~v~iD~G~~~~gy-~sD~tRT~~ 113 (263)
T 2gg2_A 62 HGYPKSVCISINEVVCHGIPDDAKLLKDGDIVNIDVTVIKDGF-HGDTSKMFI 113 (263)
T ss_dssp GGCCSSSEEEETTEEECCCCCTTCBCCTTCEEEEEEEEEETTE-EEEEEEEEE
T ss_pred cCCCcceEecccccccCCCCCCCcCcCCCCEEEEEEEEEECCE-EEEEEEEEE
Confidence 4689999999999999999998 99999999999999988774 456666553
No 48
>4b28_A Metallopeptidase, family M24, putative; lyase, imethylsulfonioproionate, acrylate, dimethylsulfide; 2.15A {Roseobacter denitrificans och 114}
Probab=97.46 E-value=1.6e-06 Score=88.76 Aligned_cols=42 Identities=14% Similarity=0.269 Sum_probs=34.1
Q ss_pred cCCCccccccccCCcccccCcceecccccC-CCCCCHHHHHhhh
Q psy247 149 SGDNANVIHYVHNNQKCCHGDLLLMDAGFS-KPGRTEHELFTKF 191 (413)
Q Consensus 149 sG~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 191 (413)
+|+|++.+|+.++++.++.||++++|.|+. ..+ +.+|+++||
T Consensus 293 sG~n~~~~H~~~~~~~l~~Gd~vliD~G~~g~~G-Y~sDitRT~ 335 (470)
T 4b28_A 293 SGPRSNPWFQECGPRVCQRNEIISFDTDLVGAYG-ICTDISRSW 335 (470)
T ss_dssp EGGGGSSTTCCCCSCBCCSSEEEEEECCEECGGG-CEECCEEEE
T ss_pred EcCccccCCCCCCCccccCCCEEEEEecccccCe-EEEeeEEEE
Confidence 578889999999999999999999999876 444 556666654
No 49
>3il0_A Aminopeptidase P; XAA-Pro aminopeptidase; structural genomics MCSG, protein structure initiative, midwest center for STRU genomics; HET: GOL; 2.20A {Streptococcus thermophilus}
Probab=97.19 E-value=0.00012 Score=61.13 Aligned_cols=79 Identities=11% Similarity=0.223 Sum_probs=52.4
Q ss_pred eeeeecCceEEecCCCCCCEEEEEEcCCCCCceEEEEEeCcchhh---hccCC---------------------CcccHh
Q psy247 7 YIFRQNTDFFYFTGCLEPDSAVVIHGASDENFKSELFVKRKDAKA---ELWDG---------------------PRTGKA 62 (413)
Q Consensus 7 ~~f~q~~n~~YltG~~~~~~~lv~~~~~~~~~~~~l~v~~~~~~~---~~~~~---------------------~~~~~~ 62 (413)
+.+.+..|++|||||...+++++|+.+ +++|+++.++... +.|.. .++++|
T Consensus 23 ~li~~~~ni~YltGf~~~~~~llv~~~-----~~~l~~d~r~~~~a~~~~~~~~v~~~~~~~~~l~~~l~~~~~~~ig~e 97 (131)
T 3il0_A 23 LLVTGQNNIYYLTDFWGTNATVFITKN-----RRLFLTDSRYTLIAKQSVHGFDIIESKDPLKDIVKFVEVDKLETIGFD 97 (131)
T ss_dssp EEECSHHHHHHHHSCCCSSEEEEEESS-----CEEEEECTTSHHHHHHHCCSSEEEECSCHHHHHHHHHHHTTCCEEEEE
T ss_pred EEEecccccEEEeCcccCCeEEEEECC-----CCEEEECchhHHHHHHhCCCcEEEEeCCHHHHHHHHHHhcCCCEEEEc
Confidence 566777899999999877788888865 4789999876431 11110 112222
Q ss_pred ------hHhhhcCCCCCCcccchHHHHHHHHccC
Q psy247 63 ------QLNGYVPRRKDYSWNVPKQLFHQLRLYK 90 (413)
Q Consensus 63 ------~~~~~l~~~~~~~~~d~~~~l~~~R~vK 90 (413)
.+..+...+++.+++++++++..+|+||
T Consensus 98 ~~~~~~~~~~L~~~~~~~~~v~~~~~v~~lR~iK 131 (131)
T 3il0_A 98 NQVSFAYYQALQAIFEGYTLSPQTNFMEELRMIK 131 (131)
T ss_dssp TTSCHHHHHHHHHHTTTSEEEEESSHHHHHHC--
T ss_pred CCCCHHHHHHHHhhcCCCEEEECchHHHHhccCC
Confidence 2333333456788899999999999998
No 50
>3pn9_A Proline dipeptidase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, hydrolase; 2.00A {Streptococcus pneumoniae}
Probab=97.08 E-value=0.00028 Score=59.24 Aligned_cols=80 Identities=11% Similarity=0.142 Sum_probs=52.6
Q ss_pred eeeeecCceEEecCCCCCCE----EEEEEcCCCCCceEEEEEeCcchhh--hcc-------CCCcccHhhHhhhc-----
Q psy247 7 YIFRQNTDFFYFTGCLEPDS----AVVIHGASDENFKSELFVKRKDAKA--ELW-------DGPRTGKAQLNGYV----- 68 (413)
Q Consensus 7 ~~f~q~~n~~YltG~~~~~~----~lv~~~~~~~~~~~~l~v~~~~~~~--~~~-------~~~~~~~~~~~~~l----- 68 (413)
+.+.+..|++|||||...++ +++|+.++ +++||++.++... +.| .......+.+.+++
T Consensus 22 ~li~~~~ni~yltGf~g~~~er~~~lli~~~g----~~~l~~d~~~~~~a~~~~~~~v~~~~~~~~~~~~l~~~l~~~~~ 97 (138)
T 3pn9_A 22 AVVSDPVTINYLTGFYSDPHERQMFLFVLADQ----EPLLFVPALEVERASSTVSFPVVGYVDSENPWQKIKHALPQLDF 97 (138)
T ss_dssp EEECCHHHHHHHHSCCCCCTTSCCEEEEESSS----CCEEEEEGGGHHHHHHHCSSCEEEECTTSCHHHHHHHHSCCCCC
T ss_pred EEEcCcCceeeecCCCCCCccceEEEEEeCCC----CEEEEEeccchhhhhccCCCcEEEEcCCCCHHHHHHHHHHhccC
Confidence 56677889999999986553 77787664 5799999876431 212 11111122233333
Q ss_pred -------------------CCCCCCcccchHHHHHHHHccC
Q psy247 69 -------------------PRRKDYSWNVPKQLFHQLRLYK 90 (413)
Q Consensus 69 -------------------~~~~~~~~~d~~~~l~~~R~vK 90 (413)
..+++.+++++++++..+|+||
T Consensus 98 ~~vg~e~~~~~~~~~~~l~~~~~~~~~v~~~~~i~~lR~iK 138 (138)
T 3pn9_A 98 KRVAVEFDNLILTKYHGLKTVFETAEFDNLTPRIQRMRLIK 138 (138)
T ss_dssp CEEEECTTTCCHHHHHHHHHHSTTCEEEECHHHHHHHTTCC
T ss_pred CeEEEecCcCCHHHHHHHHHHCCCCeeeehHHHHHHHhhcC
Confidence 2335678899999999999998
No 51
>3i7m_A XAA-Pro dipeptidase; structural genomics, APC64794.2, metall peptidase, creatinase/prolidase N-terminal domain, PSI-2; HET: MSE; 1.46A {Lactobacillus brevis}
Probab=96.77 E-value=0.00031 Score=59.35 Aligned_cols=78 Identities=10% Similarity=0.127 Sum_probs=49.7
Q ss_pred eeeeecCceEEecCCCCCCE----EEEEEcCCCCCceEEEEEeCcchhh---hc-------cCC----------------
Q psy247 7 YIFRQNTDFFYFTGCLEPDS----AVVIHGASDENFKSELFVKRKDAKA---EL-------WDG---------------- 56 (413)
Q Consensus 7 ~~f~q~~n~~YltG~~~~~~----~lv~~~~~~~~~~~~l~v~~~~~~~---~~-------~~~---------------- 56 (413)
+.+.++.|++|||||....+ +++|+.++ +++|+++.++... +. |..
T Consensus 21 ~li~~~~ni~YlTGf~~~~~er~~~llv~~~g----~~~l~~~~~~~~~a~~~~~~~~i~~~~d~~~~~~~l~~~l~~~~ 96 (140)
T 3i7m_A 21 TYLSNPKTIEYLTGFGSDPIERVLALVVFPDQ----DPFIFAPALEVEVIKETGWQFPVIGYLDHENPWAMIADQVKQRH 96 (140)
T ss_dssp EEECCHHHHHHHHCCCCCCCSSCCEEEECSSS----CCEEEEEGGGHHHHHTTTCCSCEEEECTTSCHHHHHHHHHHHTT
T ss_pred EEECCCCcceeecCCCCCCccceEEEEEeCCC----CEEEEEecccHHHHHhccCcCcEEEEcCCCCHHHHHHHHHHHhC
Confidence 66778899999999986554 77787654 5789999987531 11 211
Q ss_pred ---CcccHh-------hHhhhcCCCCCCccc-chHHHHHHHHc
Q psy247 57 ---PRTGKA-------QLNGYVPRRKDYSWN-VPKQLFHQLRL 88 (413)
Q Consensus 57 ---~~~~~~-------~~~~~l~~~~~~~~~-d~~~~l~~~R~ 88 (413)
.++|+| .+..+.+.+++++++ ++++++.++|+
T Consensus 97 ~~~~~ig~e~~~~~~~~~~~L~~~l~~~~~v~~~~~~i~~lR~ 139 (140)
T 3i7m_A 97 VNPEHVAIEKGQLQVARMEALAAQFSAPSFDLDITSFIEHMRG 139 (140)
T ss_dssp CCCSEEEECTTTSCHHHHHHHHTTSSSCEEEEECHHHHHHC--
T ss_pred CCCCeEEEccCCCCHHHHHHHHHHCCCCEEecCHHHHHHHHHc
Confidence 122222 233333445667888 88888888885
No 52
>3qoc_A Putative metallopeptidase; MCSG, PSI-2, structural genomics, midwest center for structu genomics, hydrolase; HET: MSE; 2.15A {Corynebacterium diphtheriae}
Probab=96.22 E-value=0.0004 Score=58.61 Aligned_cols=39 Identities=13% Similarity=0.252 Sum_probs=31.1
Q ss_pred eeeeecCceEEecCCCCCCEEEEEEcCCCCCceEEEEEeCcch
Q psy247 7 YIFRQNTDFFYFTGCLEPDSAVVIHGASDENFKSELFVKRKDA 49 (413)
Q Consensus 7 ~~f~q~~n~~YltG~~~~~~~lv~~~~~~~~~~~~l~v~~~~~ 49 (413)
|.+.++.|++|||||...+++++|+.++ +++||++.++.
T Consensus 29 ~li~~~~n~~yltGf~~s~g~lvv~~~~----~a~l~td~Ry~ 67 (135)
T 3qoc_A 29 MLVTHLTHIRYLSGFTGSNAALIINKDL----SARISTDGRYI 67 (135)
T ss_dssp EEECCHHHHHHHHCCCSSCCEEEEETTS----CEEEEECGGGH
T ss_pred EEEcChhhCeeeecccCCCeEEEEeeCC----ccEEEeCcHHH
Confidence 5667788999999998777888888433 68999997764
No 53
>3o5v_A X-Pro dipeptidase; creatinase, N-terminal, PSI, MCSG, structural G midwest center for structural genomics; 1.85A {Streptococcus pyogenes m1 gas}
Probab=95.97 E-value=0.0022 Score=53.52 Aligned_cols=40 Identities=20% Similarity=0.254 Sum_probs=31.1
Q ss_pred eeeeecCceEEecCCCCCCE----EEEEEcCCCCCceEEEEEeCcchh
Q psy247 7 YIFRQNTDFFYFTGCLEPDS----AVVIHGASDENFKSELFVKRKDAK 50 (413)
Q Consensus 7 ~~f~q~~n~~YltG~~~~~~----~lv~~~~~~~~~~~~l~v~~~~~~ 50 (413)
+.+.++.|++|||||....+ +++|+.++ +++|+++.++..
T Consensus 20 ~li~~~~ni~YltGf~~~~~er~~~l~v~~~g----~~~l~~~~~y~~ 63 (132)
T 3o5v_A 20 AIFSDPVTINYLTGFFCDPHERQLFLFVYHDL----APVLFVPALEVA 63 (132)
T ss_dssp EEECCHHHHHHHHSCCCCCTTSCCEEEEESSS----CCEEEEEGGGHH
T ss_pred EEEcCcchhhHhhCCCCCCccceEEEEEeCCC----CEEEEeehhhhH
Confidence 56677899999999985443 77888654 579999998753
No 54
>3ooo_A Proline dipeptidase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, hydrolase; HET: MSE; 1.57A {Streptococcus agalactiae} PDB: 3peb_A*
Probab=95.89 E-value=0.0022 Score=53.38 Aligned_cols=40 Identities=18% Similarity=0.265 Sum_probs=31.1
Q ss_pred eeeeecCceEEecCCCCCCE----EEEEEcCCCCCceEEEEEeCcchh
Q psy247 7 YIFRQNTDFFYFTGCLEPDS----AVVIHGASDENFKSELFVKRKDAK 50 (413)
Q Consensus 7 ~~f~q~~n~~YltG~~~~~~----~lv~~~~~~~~~~~~l~v~~~~~~ 50 (413)
+.+.++.|++|||||....+ +++|+.++ +++|+++.++..
T Consensus 20 ~li~~~~ni~YlTGf~~~~~er~~~l~v~~~g----~~~l~~~~~y~~ 63 (132)
T 3ooo_A 20 AVFSDPVTVNYLTGFFCDPHERQMFLFVYEDR----DPILFVPALEVS 63 (132)
T ss_dssp EEECCHHHHHHHHSCCCCCTTSCCEEEEESSS----CCEEEEEGGGHH
T ss_pred EEEcCcchHHHHhCCCCCCCcceEEEEEeCCC----CEEEEEeccchH
Confidence 56678899999999985443 77787654 579999998753
No 55
>3biq_A FACT complex subunit SPT16; PITA-bread, aminopeptidase, chromatin, replication, AC chromosomal protein, DNA damage, DNA repair; 1.73A {Saccharomyces cerevisiae} PDB: 3bip_A 3bit_A*
Probab=95.82 E-value=0.038 Score=56.01 Aligned_cols=114 Identities=16% Similarity=0.225 Sum_probs=74.8
Q ss_pred CCCCCceeecCCCcc-ccccccCCcccccCcceecccccCCCCCCHHHHHhhhHHH------------------------
Q psy247 140 ILAYPPVVASGDNAN-VIHYVHNNQKCCHGDLLLMDAGFSKPGRTEHELFTKFDYE------------------------ 194 (413)
Q Consensus 140 ~~~~~~iv~sG~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------ 194 (413)
..+|++|+++|.|++ .+|+.++++.++.||++++|.|+.+.++ .+|++|||.+.
T Consensus 256 ~~~f~~iv~~G~n~~~~~H~~~~~~~l~~gd~v~iD~g~~~~gy-~sD~tRT~~~g~~~~~~~~~~~v~~a~~~~~~~~~ 334 (467)
T 3biq_A 256 DWTYSPIIQSGKKFDLRVSARSTNDQLYGNGCILASCGIRYNNY-CSNITRTFLIDPSEEMANNYDFLLTLQKEIVTNIL 334 (467)
T ss_dssp EESSCCEEECTTCCCCSTTCCCCSSBCCCSEEEEEEECEEETTE-ECCEEEEEEESCCHHHHHHHHHHHHHHHHHHHHTC
T ss_pred cCCCCCeEEecCCcceeeccCCCCCccCCCCEEEEEEeEEECCE-EeeeeEEEEeCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 468999999999999 9999999999999999999999987663 34444443321
Q ss_pred ----------------HHhhcc-cccCCCcee--ccCCCc-ccccc-c-cC-CccccCCCEEEEeccee-------eCcE
Q psy247 195 ----------------VRMRGA-QILAYPPVV--ASGDNA-NVIHY-V-HN-NQKCCHGDLLLMDAGCE-------LNGY 244 (413)
Q Consensus 195 ----------------~~~~~~-~~~~~~~~v--~~g~~~-~~~h~-~-~~-~~~i~~Gd~v~iD~g~~-------~~GY 244 (413)
....|. ....|+--+ +.|..- ..|.. . .+ +.+|++|.++.++.|.. .+.+
T Consensus 335 ~pG~~~~~v~~~~~~~~~~~g~g~~~~~~h~~GHgiGl~~hE~p~~~~~~~~~~~l~~Gmv~tiEPgiy~~~~~~~~g~~ 414 (467)
T 3biq_A 335 KPGRTPKEVYESVIEYIEKTKPELVPNFTKNIGSLIGLEFRDSNFILNVKNDYRKIQRGDCFNISFGFNNLKDSQSANNY 414 (467)
T ss_dssp CTTCCHHHHHHHHHHHHHHHCGGGGGGBCSCCEEECSSSSCCGGGBSSTTCCSCCCCTTCEEEEEEEEEEECCSSCSSCE
T ss_pred cCCCcHHHHHHHHHHHHHHhCcchhhcCCCCcccccccccccCCccCCCCCCCCccCCCCEEEEeCeEEeeecCCCCCcc
Confidence 111110 001121111 222110 01111 1 13 67899999999999986 3468
Q ss_pred EeceEEEEee
Q psy247 245 DSDITRTWPI 254 (413)
Q Consensus 245 ~aDitRT~~v 254 (413)
..-+.-|+.|
T Consensus 415 gvriEd~v~V 424 (467)
T 3biq_A 415 ALQLADTVQI 424 (467)
T ss_dssp EEEEEEEEEC
T ss_pred EEEEEEEEEE
Confidence 8888889988
No 56
>3ctz_A XAA-Pro aminopeptidase 1; PITA-bread fold, alternative splicing, cytoplasm, hydrolase, manganese, metal-binding, metalloprotease, protease; HET: P6G; 1.60A {Homo sapiens}
Probab=95.55 E-value=0.0015 Score=69.14 Aligned_cols=49 Identities=18% Similarity=0.447 Sum_probs=43.2
Q ss_pred CceeecCCCccccccccC---CcccccCcceecccccCCCCCCHHHHHhhhHH
Q psy247 144 PPVVASGDNANVIHYVHN---NQKCCHGDLLLMDAGFSKPGRTEHELFTKFDY 193 (413)
Q Consensus 144 ~~iv~sG~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (413)
++|+++|+|++.+||.++ ++.++.||++++|.|+.+.++ .+|++|||.+
T Consensus 382 ~~iv~~G~n~a~~H~~~~~~~~~~l~~gd~vliD~G~~y~gy-~sDiTRT~~v 433 (623)
T 3ctz_A 382 PTISSTGPTGAIIHYAPVPETNRTLSLDEVYLIDSGAQYKDG-TTDVTRTMHF 433 (623)
T ss_dssp CCEEEEGGGGGCTTCCCCGGGCCBCCTTSCEEEEECEEETTE-ECCEEEEECS
T ss_pred CceeeecCccccccCCCCCCCCcccCCCCEEEEEEeEEECCE-EEEEEEEEEC
Confidence 479999999999999985 789999999999999999886 5888887753
No 57
>3mx6_A Methionine aminopeptidase; seattle structural genomics center for infectious disease, S aminopeptidase, protease, epidermic typhus; 1.70A {Rickettsia prowazekii} PDB: 3mr1_A
Probab=95.42 E-value=0.0013 Score=61.84 Aligned_cols=51 Identities=18% Similarity=0.243 Sum_probs=44.0
Q ss_pred CCCCceeecCCCccccccccCCcccccCcceecccccCCCCCCHHHHHhhhH
Q psy247 141 LAYPPVVASGDNANVIHYVHNNQKCCHGDLLLMDAGFSKPGRTEHELFTKFD 192 (413)
Q Consensus 141 ~~~~~iv~sG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (413)
.+|++++++|.|++.+|+.++++.++.||++++|.|+.+.++ .+|+++||.
T Consensus 65 ~~f~~iv~~g~n~~~~H~~p~~~~l~~Gd~v~iD~G~~~~GY-~sD~tRT~~ 115 (262)
T 3mx6_A 65 KGFPKSICTSINHVVCHGIPNDKPLKNGDIVNIDVTVILDGW-YGDTSRMYY 115 (262)
T ss_dssp GGCCSSSEEEETTEEECCCCCSCBCCTTCEEEEEEEEEETTE-EEEEEEEEE
T ss_pred CCCCcceEecccccccCCCCCCcccCCCCEEEEEeeEEECCE-EEEEEEEEE
Confidence 468999999999999999999999999999999999988774 356666654
No 58
>3ig4_A XAA-Pro aminopeptidase; csgid, hydrolase, struct genomics, center for structural genomics of infectious DISE; HET: SO4; 2.89A {Bacillus anthracis}
Probab=95.02 E-value=0.01 Score=59.82 Aligned_cols=23 Identities=30% Similarity=0.508 Sum_probs=19.9
Q ss_pred CCCCCCHHHHHhhhHHHHHhhcc
Q psy247 178 SKPGRTEHELFTKFDYEVRMRGA 200 (413)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~ 200 (413)
.+++++|.+|.+.++..++..|+
T Consensus 198 i~pG~tE~el~~~~~~~~~~~G~ 220 (427)
T 3ig4_A 198 AKADMMEYELEAQFDFTLKSSGI 220 (427)
T ss_dssp CCSSEEHHHHHHHHHHHHHHTTC
T ss_pred ccCCCCHHHHHHHHHHHHHHcCC
Confidence 46789999999999999988775
No 59
>3fm3_A Methionine aminopeptidase 2; metap2, structural genomics, PSI-2, protein structure initiative; 2.18A {Encephalitozoon cuniculi} PDB: 3fmq_A* 3fmr_A*
Probab=94.31 E-value=0.17 Score=49.56 Aligned_cols=97 Identities=10% Similarity=-0.024 Sum_probs=62.5
Q ss_pred HHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHH--HHHHcCcccccccccccCCCC-----ccCCCCCCCCCCCCCCcc
Q psy247 261 HQKVLYEIVLDTQLKLLKLCEKSDSALNFIYRYA--YVFQIGFKFCPHHSSHYLGMD-----VHDCAAIPRTIPVAPGVV 333 (413)
Q Consensus 261 ~~~~~~~~~~~a~~~~~~~lkp~G~~~~ei~~~~--~~~~~g~~~~~h~~GHgiGl~-----~~E~p~~~~~~~~~~g~~ 333 (413)
..|++.+...++++.+.+.+|| |++..||.+.+ .+.+.|......+.|+-+... +|-.|.-
T Consensus 47 ~~R~Aa~I~~~v~~~~~~~ikp-G~t~~el~~~~e~~i~~~~~~~~~~g~~FP~ciSvN~~v~Hg~P~~----------- 114 (358)
T 3fm3_A 47 DARRAAEAHRRARYRVQSIVRP-GITLLEIVRSIEDSTRTLLKGERNNGIGFPAGMSMNSCAAHYTVNP----------- 114 (358)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCT-TCBHHHHHHHHHHHHHHHTTTSGGGGEEEEEEEEETTEEECCCCCT-----------
T ss_pred HHHHHHHHHHHHHHHHHHhCCC-CCcHHHHHHHHHHHHHHhcCCCcccCCCCCcEEeeCCEEEecCCCC-----------
Confidence 4588999999999999999999 99999998877 444444311111112111111 1222320
Q ss_pred eecCCCCccccCCCCCCCCCCCCCcEEEeCCeeeEcCCCCCcccccccceEEEceeEEEeC
Q psy247 334 FTVEPGMDVHDCAAIPRTIPVAPGMVFTVEPGVYISKDCKETRPEFRGMGIRIEDDILIDK 394 (413)
Q Consensus 334 ~~~~pg~~~~~~~~~~~~~~L~~GMv~~iEPgi~~~~~~~~~~~~~~~~gvriED~vlVt~ 394 (413)
...+.+|++|.++.|.-|+.+.+ +-.-+.-|+.|.+
T Consensus 115 --------------~~~~~~L~~GDiV~ID~G~~~dG-----------Y~sD~arT~~vg~ 150 (358)
T 3fm3_A 115 --------------GEQDIVLKEDDVLKIDFGTHSDG-----------RIMDSAFTVAFKE 150 (358)
T ss_dssp --------------TCCCCBCCTTCEEEEEEEEEETT-----------EEEEEEEEEECCG
T ss_pred --------------CCCCeEecCCCEEEEEeeEEECC-----------EEEEEEEeccccc
Confidence 23478999999999999998765 3333455666654
No 60
>2v3z_A XAA-Pro aminopeptidase; 'PITA-bread' enzyme, proline- specific enzyme, aminopeptidas manganese enzyme, protease, manganese; HET: CSO; 1.56A {Escherichia coli} SCOP: c.55.2.1 d.127.1.1 PDB: 2bwy_A* 1wl9_A 1m35_A 1n51_A* 1w2m_A 1a16_A 1wbq_A 1wl6_A* 1w7v_A 1wlr_A* 2bh3_A* 2bha_A* 2bhb_A* 2bhc_A* 2bhd_A* 2bn7_A* 1jaw_A 2bwt_A* 2bwu_A* 2bww_A* ...
Probab=94.31 E-value=0.023 Score=57.30 Aligned_cols=23 Identities=30% Similarity=0.381 Sum_probs=19.3
Q ss_pred CCCCCCHHHHHhhhHHHHHhhcc
Q psy247 178 SKPGRTEHELFTKFDYEVRMRGA 200 (413)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~ 200 (413)
.+++++|.++.+.++..++..|+
T Consensus 202 i~~G~tE~el~~~~~~~~~~~G~ 224 (440)
T 2v3z_A 202 CRPGMFEYHLEGEIHHEFNRHGA 224 (440)
T ss_dssp CCTTCBHHHHHHHHHHHHHHTTC
T ss_pred ccCCCcHHHHHHHHHHHHHHcCC
Confidence 35788999999999998887664
No 61
>1wy2_A XAA-Pro dipeptidase; structural genomics, prolidase, riken structural genomics/PR initiative, RSGI, hydrolase; 1.70A {Pyrococcus horikoshii} PDB: 1pv9_A
Probab=94.03 E-value=0.029 Score=54.79 Aligned_cols=22 Identities=36% Similarity=0.694 Sum_probs=18.6
Q ss_pred CCCCCHHHHHhhhHHHHHhhcc
Q psy247 179 KPGRTEHELFTKFDYEVRMRGA 200 (413)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~ 200 (413)
++|++|.++.+.++...+..|+
T Consensus 155 ~~G~te~el~~~~~~~~~~~g~ 176 (351)
T 1wy2_A 155 TEGKKEREVAAKVEYLMKMNGA 176 (351)
T ss_dssp CTTCBHHHHHHHHHHHHHHTTC
T ss_pred cCCCcHHHHHHHHHHHHHHcCC
Confidence 5788999999999988877664
No 62
>2zsg_A Aminopeptidase P, putative; hydrolase; 1.65A {Thermotoga maritima}
Probab=93.96 E-value=0.03 Score=54.60 Aligned_cols=22 Identities=36% Similarity=0.665 Sum_probs=18.6
Q ss_pred CCCCCHHHHHhhhHHHHHhhcc
Q psy247 179 KPGRTEHELFTKFDYEVRMRGA 200 (413)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~ 200 (413)
++|++|.++.+.++...+..|+
T Consensus 161 ~~G~te~e~~~~~~~~~~~~g~ 182 (359)
T 2zsg_A 161 RAGMTEKEIAALLEYTMRKEGA 182 (359)
T ss_dssp CTTCBHHHHHHHHHHHHHHTTC
T ss_pred cCCCCHHHHHHHHHHHHHHcCC
Confidence 5678999999999988877664
No 63
>3q6d_A Proline dipeptidase; structural genomics, csgid, center for structural genomics O infectious diseases, aminopeptidase, viral protein; 1.97A {Bacillus anthracis}
Probab=93.88 E-value=0.034 Score=54.22 Aligned_cols=23 Identities=30% Similarity=0.603 Sum_probs=19.3
Q ss_pred CCCCCCHHHHHhhhHHHHHhhcc
Q psy247 178 SKPGRTEHELFTKFDYEVRMRGA 200 (413)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~ 200 (413)
.+++++|.++.+.++...+..|+
T Consensus 157 i~~G~te~e~~~~~~~~~~~~g~ 179 (356)
T 3q6d_A 157 IRPGVSEIEVSNELEFFMRKQGA 179 (356)
T ss_dssp CCTTCBHHHHHHHHHHHHHHTTC
T ss_pred ccCCCCHHHHHHHHHHHHHHCCC
Confidence 45789999999999988887665
No 64
>2iw2_A XAA-Pro dipeptidase; metallocarboxypeptidase, disease mutation, XAA-Pro dipeptida dipeptidase, peptidase D, collagen degradation; 1.82A {Homo sapiens} PDB: 2okn_A
Probab=92.37 E-value=0.072 Score=54.52 Aligned_cols=34 Identities=29% Similarity=0.305 Sum_probs=28.4
Q ss_pred CCCCCCHHHHHhhhHHHHHhh-cccccCCCceecc
Q psy247 178 SKPGRTEHELFTKFDYEVRMR-GAQILAYPPVVAS 211 (413)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~v~~ 211 (413)
.+++++|.+|.+.+....... |+...+|+++|++
T Consensus 214 i~~G~tE~el~~~~~~~~~~~~G~~~~~~~~iv~s 248 (494)
T 2iw2_A 214 VKVGMKEYELESLFEHYCYSRGGMRHSSYTCICGS 248 (494)
T ss_dssp CCTTCBHHHHHHHHHHHHHHHHCCCEESSCCEEEE
T ss_pred ccCCCcHHHHHHHHHHHHHHhCCCCcCCCCceEEE
Confidence 457899999999998777665 8888999998864
No 65
>1xgs_A Methionine aminopeptidase; hyperthermophIle; 1.75A {Pyrococcus furiosus} SCOP: a.4.5.25 d.127.1.1 PDB: 1xgm_A 1xgn_A 1xgo_A 1wkm_A 2dfi_A
Probab=92.19 E-value=0.7 Score=43.82 Aligned_cols=95 Identities=16% Similarity=0.126 Sum_probs=65.2
Q ss_pred HHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHH--HHHHcCc-ccccccccccCC-CCccCCCCCCCCCCCCCCccee
Q psy247 260 DHQKVLYEIVLDTQLKLLKLCEKSDSALNFIYRYA--YVFQIGF-KFCPHHSSHYLG-MDVHDCAAIPRTIPVAPGVVFT 335 (413)
Q Consensus 260 ~~~~~~~~~~~~a~~~~~~~lkp~G~~~~ei~~~~--~~~~~g~-~~~~h~~GHgiG-l~~~E~p~~~~~~~~~~g~~~~ 335 (413)
+..|++.+.+.++.+.+.+.+|| |++-.|+.+.+ .+.+.|. .-|+-.++ ++ ..+|-.|.
T Consensus 4 ~~mr~A~~i~~~~l~~~~~~i~p-G~te~el~~~~~~~~~~~G~~~~fp~~vs--~n~~~~H~~p~-------------- 66 (295)
T 1xgs_A 4 EKLMKAGEIAKKVREKAIKLARP-GMLLLELAESIEKMIMELGGKPAFPVNLS--INEIAAHYTPY-------------- 66 (295)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCT-TCBHHHHHHHHHHHHHHTTCEESSCCEEE--ETTEEECCCCC--------------
T ss_pred HHHHHHHHHHHHHHHHHHHHCCC-CCCHHHHHHHHHHHHHHcCCCCCCCcEEe--eCCccccccCC--------------
Confidence 35688889999999999999999 99999999888 5556664 22332221 11 01221121
Q ss_pred cCCCCccccCCCCCCCCCCCCCcEEEeCCeeeEcCCCCCcccccccceEEEceeEEEeC
Q psy247 336 VEPGMDVHDCAAIPRTIPVAPGMVFTVEPGVYISKDCKETRPEFRGMGIRIEDDILIDK 394 (413)
Q Consensus 336 ~~pg~~~~~~~~~~~~~~L~~GMv~~iEPgi~~~~~~~~~~~~~~~~gvriED~vlVt~ 394 (413)
..++.+|++|.++.|+-|....+ +-.-+.-|+.|.+
T Consensus 67 ------------~~~~~~L~~GDiv~iD~G~~~~G-----------Y~sD~tRT~~vG~ 102 (295)
T 1xgs_A 67 ------------KGDTTVLKEGDYLKIDVGVHIDG-----------FIADTAVTVRVGM 102 (295)
T ss_dssp ------------TTCCCBCCTTCEEEEEEEEEETT-----------EEEEEEEEEETTS
T ss_pred ------------CCCCccccCCCEEEEEEeEEECC-----------EEEEEEEEEEeCH
Confidence 12368999999999998887643 5566777888765
No 66
>1wn1_A Dipeptidase; prolidase, cobalt(II), structural genomics, riken structural genomics/proteomics initiative, RSGI, hydrolase; 2.25A {Pyrococcus horikoshii} PDB: 2how_A
Probab=92.02 E-value=0.088 Score=51.40 Aligned_cols=21 Identities=29% Similarity=0.267 Sum_probs=17.6
Q ss_pred CCCCCCHHHHHhhhHHHHHhh
Q psy247 178 SKPGRTEHELFTKFDYEVRMR 198 (413)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~ 198 (413)
.+++++|.++.+.++...+..
T Consensus 158 i~~G~te~el~~~~~~~~~~~ 178 (356)
T 1wn1_A 158 DLIGMKERELALKIELLIREL 178 (356)
T ss_dssp CCTTCBHHHHHHHHHHHHHHH
T ss_pred ccCCCcHHHHHHHHHHHHHHh
Confidence 457889999999999888765
No 67
>3ovk_A Aminopeptidase P, XAA-Pro dipeptidase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.00A {Streptococcus pyogenes}
Probab=92.01 E-value=0.042 Score=45.60 Aligned_cols=38 Identities=18% Similarity=0.352 Sum_probs=30.6
Q ss_pred eeeeecCceEEecCCCCCCEEEEEEcCCCCCceEEEEEeCcch
Q psy247 7 YIFRQNTDFFYFTGCLEPDSAVVIHGASDENFKSELFVKRKDA 49 (413)
Q Consensus 7 ~~f~q~~n~~YltG~~~~~~~lv~~~~~~~~~~~~l~v~~~~~ 49 (413)
+.+.++.|++|||||...+++++++.+ +++|+++.++.
T Consensus 27 ~li~~~~n~~YltGf~~~~~~~vv~~~-----~~~l~td~ry~ 64 (132)
T 3ovk_A 27 LLVTHLTNSYYLTGFSGTAATVLITAK-----RRVLITDSRYT 64 (132)
T ss_dssp EEECSHHHHHHHHCCCCSCCEEEEESS-----CEEEEECTTTH
T ss_pred EEEcCcccceeeeCccCCCEEEEEECC-----ccEEEECchhH
Confidence 566778899999999877777887753 68999998764
No 68
>3rva_A Organophosphorus acid anhydrolase; PITA-bread fold, binuclea center, BI-functional, prolidase, nerve agents, XAA-Pro DIP hydrolase; 1.80A {Alteromonas macleodii}
Probab=90.70 E-value=0.13 Score=52.01 Aligned_cols=20 Identities=15% Similarity=0.154 Sum_probs=14.1
Q ss_pred HHHHHhccCCCCCHHHHHHH
Q psy247 109 FKETIGFSKPGRTEHELFTK 128 (413)
Q Consensus 109 ~~~~~~~~~~G~tE~el~~~ 128 (413)
+..++..+|.=+|+.||+..
T Consensus 149 ~~~~l~~lR~iKs~~EI~~m 168 (451)
T 3rva_A 149 VLHYLHYQRAYKTDYELDCM 168 (451)
T ss_dssp HHHHHHHHHTSCCHHHHHHH
T ss_pred HHHHHHHHHhcCCHHHHHHH
Confidence 44566667778899988643
No 69
>4ege_A Dipeptidase PEPE; structural genomics, seattle structural genomics center for infectious disease, ssgcid, hydrolase; 2.20A {Mycobacterium ulcerans}
Probab=88.85 E-value=0.17 Score=49.76 Aligned_cols=24 Identities=25% Similarity=0.383 Sum_probs=20.2
Q ss_pred CCCCCCHHHHHhhhHHHHHhhccc
Q psy247 178 SKPGRTEHELFTKFDYEVRMRGAQ 201 (413)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~ 201 (413)
.++|++|.++.+.++...+..|+.
T Consensus 177 i~~G~tE~el~~~~~~~~~~~G~~ 200 (378)
T 4ege_A 177 LVPGRTEAQVAADIAEAIVAEGHS 200 (378)
T ss_dssp CCTTCBHHHHHHHHHHHHHHTTCS
T ss_pred ccCCCCHHHHHHHHHHHHHHcCCC
Confidence 457889999999999998887763
No 70
>2nw5_A Methionine aminopeptidase 2; metap2, structural genomics, PSI-2, protein structure initiative; 2.18A {Encephalitozoon cuniculi} PDB: 3cmk_A* 3d0d_A* 3fm3_A 3fmq_A* 3fmr_A*
Probab=87.29 E-value=2.7 Score=41.00 Aligned_cols=90 Identities=11% Similarity=0.016 Sum_probs=59.0
Q ss_pred HHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHH--HHHHcCcc------cccccccccCCCC---ccCCCCCCCCCCCCC
Q psy247 262 QKVLYEIVLDTQLKLLKLCEKSDSALNFIYRYA--YVFQIGFK------FCPHHSSHYLGMD---VHDCAAIPRTIPVAP 330 (413)
Q Consensus 262 ~~~~~~~~~~a~~~~~~~lkp~G~~~~ei~~~~--~~~~~g~~------~~~h~~GHgiGl~---~~E~p~~~~~~~~~~ 330 (413)
.|++.+.+.++.+.+.+.+|| |++-.||.+.+ .+.+.|.. -||.. +|.+ +|-.|.
T Consensus 50 mR~A~~I~~~a~~~~~~~ikp-G~te~El~~~ie~~~~~~g~~~~~~~~aFpt~----~s~N~~~~H~~P~--------- 115 (360)
T 2nw5_A 50 ARRAAEAHRRARYRVQSIVRP-GITLLEIVRSIEDSTRTLLKGERNNGIGFPAG----MSMNSCAAHYTVN--------- 115 (360)
T ss_dssp HHHHHHHHHHHHHHHHHHCCT-TCBHHHHHHHHHHHHHHHTTTSGGGGEEEEEE----EEETTEEECCCCC---------
T ss_pred HHHHHHHHHHHHHHHHHhccC-CCCHHHHHHHHHHHHHHhcCCCccCccccCce----eeccccccCCCCC---------
Confidence 456677777788888899999 99999999877 44444321 11211 2221 121121
Q ss_pred CcceecCCCCccccCCCCCC-CCCCCCCcEEEeCCeeeEcCCCCCcccccccceEEEceeEEEe
Q psy247 331 GVVFTVEPGMDVHDCAAIPR-TIPVAPGMVFTVEPGVYISKDCKETRPEFRGMGIRIEDDILID 393 (413)
Q Consensus 331 g~~~~~~pg~~~~~~~~~~~-~~~L~~GMv~~iEPgi~~~~~~~~~~~~~~~~gvriED~vlVt 393 (413)
.++ +.+|++|.++.|+-|..+.+ +..-+.-|+.|+
T Consensus 116 -----------------~~d~~~~L~~GDlV~ID~G~~~~G-----------Y~sD~tRT~~v~ 151 (360)
T 2nw5_A 116 -----------------PGEQDIVLKEDDVLKIDFGTHSDG-----------RIMDSAFTVAFK 151 (360)
T ss_dssp -----------------TTCCCCBCCTTCEEEEEEEEEETT-----------EEEEEEEEEECC
T ss_pred -----------------cccCCcCcCCCCEEEEEEEEEECC-----------EEEEEEEEEEcC
Confidence 112 68999999999998887654 566677788874
No 71
>2q8k_A Proliferation-associated protein 2G4; EBP1, PA2G4, methionine aminopeptidase, PITA-bread, transcri; 1.60A {Homo sapiens} PDB: 2v6c_A
Probab=80.00 E-value=4.3 Score=40.09 Aligned_cols=99 Identities=11% Similarity=0.151 Sum_probs=58.9
Q ss_pred HHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHH--HHHHcCccccc------ccccccCCCCccCCCCCCCCCCCCCCcc
Q psy247 262 QKVLYEIVLDTQLKLLKLCEKSDSALNFIYRYA--YVFQIGFKFCP------HHSSHYLGMDVHDCAAIPRTIPVAPGVV 333 (413)
Q Consensus 262 ~~~~~~~~~~a~~~~~~~lkp~G~~~~ei~~~~--~~~~~g~~~~~------h~~GHgiGl~~~E~p~~~~~~~~~~g~~ 333 (413)
.|++.+.+.++.+.+.+.++| |++-.||.+.+ .+.+.|...+. .++.+.+...+.+. +..+.
T Consensus 28 mR~A~~i~~~~l~~~~~~ikp-Gvte~el~~~~~~~i~~~ga~~~~~~~~~~~g~~f~~~vS~N~~--v~H~~------- 97 (401)
T 2q8k_A 28 YKMGGDIANRVLRSLVEASSS-GVSVLSLCEKGDAMIMEETGKIFKKEKEMKKGIAFPTSISVNNC--VCHFS------- 97 (401)
T ss_dssp HHHHHHHHHHHHHHHHHHCC--CCBHHHHHHHHHHHHHHHHHTSSTTCTTCCEEEEEEEEEEETTE--EECCC-------
T ss_pred HHHHHHHHHHHHHHHHHhccC-CCcHHHHHHHHHHHHHHcCChhhcccccccCCCCCCcEEeCCcc--cccCC-------
Confidence 366677777888888999999 99999999887 44444421111 11112221111110 00000
Q ss_pred eecCCCCccccCCCCC-CCCCCCCCcEEEeCCeeeEcCCCCCcccccccceEEEceeEEEe
Q psy247 334 FTVEPGMDVHDCAAIP-RTIPVAPGMVFTVEPGVYISKDCKETRPEFRGMGIRIEDDILID 393 (413)
Q Consensus 334 ~~~~pg~~~~~~~~~~-~~~~L~~GMv~~iEPgi~~~~~~~~~~~~~~~~gvriED~vlVt 393 (413)
| ..+ ++.+|++|.++.|.-|....+ |-.-+.-|+.|.
T Consensus 98 ----P--------~~~d~~~~L~~GDiV~ID~G~~~~G-----------Y~sD~tRT~~vG 135 (401)
T 2q8k_A 98 ----P--------LKSDQDYILKEGDLVKIDLGVHVDG-----------FIANVAHTFVVD 135 (401)
T ss_dssp ----C--------CTTSCCCBCCTTCEEEEEEEEEETT-----------EEEEEEEEEETT
T ss_pred ----C--------CCCCCCcccCCCCEEEEEEEEEECC-----------EEEEEEEEEEEC
Confidence 0 012 247899999999999887643 556678888886
No 72
>4b6a_t Probable metalloprotease ARX1; large ribosomal subunit, ribosome biogenesis, ribosome matur factor, ribosome; 8.10A {Saccharomyces cerevisiae}
Probab=73.42 E-value=6.3 Score=40.92 Aligned_cols=114 Identities=12% Similarity=0.128 Sum_probs=65.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhc---------ccCCCCHHHHHHHH--HHHHcC---c--ccccccccccCCCCccCCCCCC
Q psy247 260 DHQKVLYEIVLDTQLKLLKLC---------EKSDSALNFIYRYA--YVFQIG---F--KFCPHHSSHYLGMDVHDCAAIP 323 (413)
Q Consensus 260 ~~~~~~~~~~~~a~~~~~~~l---------kp~G~~~~ei~~~~--~~~~~g---~--~~~~h~~GHgiGl~~~E~p~~~ 323 (413)
...|.+-+++..+.+.+++++ +| |++..||.... .+.+.. | +....+++|.+++.+-+.-.
T Consensus 47 tKYr~AgeIa~~vLk~v~~li~~G~~~~~~kp-ga~I~ELCe~GD~~I~e~~akvyk~K~~~KGIAFPT~ISvN~~va-- 123 (614)
T 4b6a_t 47 NKYRTAGQIAQTALKYVTSLINDSYHSKTTQR-QLTVPELCLLTDSFILTRLEQYYKNKVNERGIAIPTTIDIDQISG-- 123 (614)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCCHHHHHHTTC-CCBTTHHHHHHHHHHHHHHHTSSTTCSCCEEEEEEEEEEETTEEE--
T ss_pred HHHHHHHHHHHHHHHHHHHHhcccccccccCC-CCcHHHHHHHHHHHHHHHHHhhhcCCcccCCCccCceecHHHccc--
Confidence 344566666667777776665 56 67777887665 333222 1 22344566666655433211
Q ss_pred CCCCCCCCcceecCCCCc--ccc-------CCCCCCCCCCCCCcEEEeCCeeeEcCCCCCcccccccceEEEceeEEEeC
Q psy247 324 RTIPVAPGVVFTVEPGMD--VHD-------CAAIPRTIPVAPGMVFTVEPGVYISKDCKETRPEFRGMGIRIEDDILIDK 394 (413)
Q Consensus 324 ~~~~~~~g~~~~~~pg~~--~~~-------~~~~~~~~~L~~GMv~~iEPgi~~~~~~~~~~~~~~~~gvriED~vlVt~ 394 (413)
.|.| .++-. +.+ -.....+.+|++|.|+-|.-|+.+.+ |..-..+||+|..
T Consensus 124 HysP---------~~~D~~~~~~~~~~~~~~~~~~~~~vLk~GDVVKIDLGvHIDG-----------yiadvA~Tvvvg~ 183 (614)
T 4b6a_t 124 GWCP---------EIDDTQNLLNWNKGKDSTFASSVTGTLRPGDLVKITLGVHIDG-----------YTSEVSHTMVIYP 183 (614)
T ss_dssp CCCC---------CTTS------------------CCCBCCTTCEEEEEEEEEETT-----------EEEEEEEEEECCC
T ss_pred CCCC---------CCcchhhcccccccccccccccccccccCCCEEEEEeeEEECC-----------eEEEEEEEEEECC
Confidence 0100 01100 000 00012367999999999999999976 6888999999986
Q ss_pred CC
Q psy247 395 SS 396 (413)
Q Consensus 395 ~G 396 (413)
..
T Consensus 184 ~~ 185 (614)
T 4b6a_t 184 VD 185 (614)
T ss_dssp CT
T ss_pred cc
Confidence 43
No 73
>1b6a_A Methionine aminopeptidase; angiogenesis inhibitor; HET: TN4; 1.60A {Homo sapiens} SCOP: a.4.5.25 d.127.1.1 PDB: 1qzy_A* 1boa_A* 1kq0_A 1kq9_A 1bn5_A* 1b59_A* 1yw9_A* 1r5g_A* 1r5h_A* 1r58_A* 1yw8_A* 1yw7_A* 2adu_A* 2ea2_A* 2ea4_A* 2ga2_A* 2oaz_A*
Probab=70.37 E-value=9.5 Score=38.57 Aligned_cols=91 Identities=12% Similarity=0.047 Sum_probs=54.5
Q ss_pred HHHHHHHHHHHHHHHHhcccCCCCHHHHHHHH--H----HHHcCcc---cccccccccCC-CCccCCCCCCCCCCCCCCc
Q psy247 263 KVLYEIVLDTQLKLLKLCEKSDSALNFIYRYA--Y----VFQIGFK---FCPHHSSHYLG-MDVHDCAAIPRTIPVAPGV 332 (413)
Q Consensus 263 ~~~~~~~~~a~~~~~~~lkp~G~~~~ei~~~~--~----~~~~g~~---~~~h~~GHgiG-l~~~E~p~~~~~~~~~~g~ 332 (413)
|++.+.+.++...+.+.++| |++-.||...+ . +.+.|.. .||..+ +++ ..+|-.|.
T Consensus 170 R~A~~Ia~~al~~~~~~ikp-GvTe~ELa~~le~~~~~~i~~~Ga~~g~~FP~iv--SvN~~v~Hg~P~----------- 235 (478)
T 1b6a_A 170 REAAEAHRQVRKYVMSWIKP-GMTMIEICEKLEDCSRKLIKENGLNAGLAFPTGC--SLNNCAAHYTPN----------- 235 (478)
T ss_dssp HHHHHHHHHHHHHHHHHCCT-TSBHHHHHHHHHHHHHHHHTCBTTTEEEEEEEEE--EETTEEECCCCC-----------
T ss_pred HHHHHHHHHHHHHHhhhcCC-CCcHHHHHHHHHHHHHHHHHhcCCcccCCCCeEE--ECCCccccCCCC-----------
Confidence 55566677777888899999 99999996665 1 1223431 122111 111 00111111
Q ss_pred ceecCCCCccccCCCCCCCCCCCCCcEEEeCCeeeEcCCCCCcccccccceEEEceeEEEe
Q psy247 333 VFTVEPGMDVHDCAAIPRTIPVAPGMVFTVEPGVYISKDCKETRPEFRGMGIRIEDDILID 393 (413)
Q Consensus 333 ~~~~~pg~~~~~~~~~~~~~~L~~GMv~~iEPgi~~~~~~~~~~~~~~~~gvriED~vlVt 393 (413)
.+++.+|++|.++.|.-|..+.+ +-.-+.-|+.|+
T Consensus 236 ---------------~~d~r~Lk~GDiV~ID~G~~~dG-----------Y~sD~tRT~~Vg 270 (478)
T 1b6a_A 236 ---------------AGDTTVLQYDDICKIDFGTHISG-----------RIIDCAFTVTFN 270 (478)
T ss_dssp ---------------TTCCCBCCTTCCEEEEEEEEETT-----------EEEEEEEEECSS
T ss_pred ---------------cccCccccCCCeEEEEEEEEECC-----------EEEEEEEEEEeC
Confidence 11257999999999998887654 455566777764
No 74
>3s93_A Tudor domain-containing protein 5; structural genomics consortium, SGC, transcription; 2.28A {Homo sapiens}
Probab=22.11 E-value=2e+02 Score=22.31 Aligned_cols=49 Identities=10% Similarity=-0.013 Sum_probs=36.0
Q ss_pred HHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHcCccccccccccc
Q psy247 261 HQKVLYEIVLDTQLKLLKLCEKSDSALNFIYRYAYVFQIGFKFCPHHSSHY 311 (413)
Q Consensus 261 ~~~~~~~~~~~a~~~~~~~lkp~G~~~~ei~~~~~~~~~g~~~~~h~~GHg 311 (413)
+|.++.+.+....++++-.-|. |++..++-+.+ ..-.|.....+.+||.
T Consensus 4 ~~~~~l~~vkk~irslLiS~K~-gvtl~~L~~dY-r~~~G~~iP~r~lGy~ 52 (102)
T 3s93_A 4 EQERIQECLRKEIRSLLISTKD-GLSPQELEKEY-LLMVGNHLPLRILGYR 52 (102)
T ss_dssp HHHHHHHHHHHHHHHHHHSSSS-CBCHHHHHHHH-HHHHSSCCCTGGGTCS
T ss_pred cHHHHHHHHHHHHHHhheeCCC-CcCHHHHHHHH-HHHcCCcCCchhcCcC
Confidence 5678888888888888888999 99999999874 3344544333455654
No 75
>3kor_A Possible Trp repressor; putative DNA-binding Trp repressor, TRPR like protein, struc genomics, transcription; 1.60A {Staphylococcus aureus}
Probab=20.43 E-value=1.6e+02 Score=23.66 Aligned_cols=50 Identities=14% Similarity=0.101 Sum_probs=26.5
Q ss_pred chHHHHHHHHccCCHHHHHHHH-------HHHHHHHHHHHHHHhccCCCCCHHHHHHHH
Q psy247 78 VPKQLFHQLRLYKSDSEQEMMR-------ETCRIASEGFKETIGFSKPGRTEHELFTKF 129 (413)
Q Consensus 78 d~~~~l~~~R~vKs~~Ei~~~r-------~A~~i~~~~~~~~~~~~~~G~tE~el~~~~ 129 (413)
+...++..+..+++.+|+..+= +-..++.. ..+++.+..|+|-.||+...
T Consensus 29 ~~d~L~~AIl~l~~~ee~~~fl~dL~T~~E~~aLs~R--~eV~klL~~G~syreIA~~~ 85 (119)
T 3kor_A 29 ALDELFDAILTLENREECYQFFDDLCTVNEIQSLSQR--LQVAKMIKQGYTYATIEQES 85 (119)
T ss_dssp HHHHHHHHHHTCCSHHHHHHHHHHHSCHHHHHHHHHH--HHHHHHHHHTCCHHHHHHHH
T ss_pred cHHHHHHHHHHhCCHHHHHHHHHHhCCchHHHHHHHH--HHHHHHHHcCCCHHHHHHHH
Confidence 4445555555555555543221 11122333 34555567789988887653
Done!