Query psy247
Match_columns 413
No_of_seqs 227 out of 2037
Neff 7.6
Searched_HMMs 13730
Date Fri Aug 16 17:05:11 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy247.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/247hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1pv9a2 d.127.1.1 (A:125-345) 100.0 8.3E-49 6E-53 363.1 25.2 218 90-407 1-221 (221)
2 d1o0xa_ d.127.1.1 (A:) Methion 100.0 6.4E-47 4.7E-51 355.9 23.3 238 86-403 1-248 (249)
3 d2v3za2 d.127.1.1 (A:177-440) 100.0 1.9E-46 1.4E-50 356.3 25.8 234 91-413 1-255 (264)
4 d1chma2 d.127.1.1 (A:157-402) 100.0 2.2E-46 1.6E-50 352.1 22.9 238 88-410 1-241 (246)
5 d1qxya_ d.127.1.1 (A:) Methion 100.0 2.1E-46 1.5E-50 352.7 22.1 237 88-403 2-248 (249)
6 d2gg2a1 d.127.1.1 (A:3-264) Me 100.0 1.8E-45 1.3E-49 349.0 24.8 245 88-411 2-256 (262)
7 d1xgsa2 d.127.1.1 (A:1-194,A:2 100.0 6E-43 4.4E-47 323.2 22.0 213 94-403 2-218 (218)
8 d1b6aa2 d.127.1.1 (A:110-374,A 100.0 1.2E-37 8.8E-42 300.3 20.1 230 86-403 48-291 (295)
9 d2v3za1 c.55.2.1 (A:1-176) Ami 99.6 2.1E-16 1.5E-20 139.5 3.5 63 1-63 35-97 (176)
10 d1b6aa2 d.127.1.1 (A:110-374,A 98.0 5.3E-08 3.9E-12 91.3 -6.9 185 124-376 90-289 (295)
11 d1chma2 d.127.1.1 (A:157-402) 97.8 2.3E-06 1.7E-10 77.3 1.8 51 140-191 59-109 (246)
12 d1pv9a1 c.55.2.1 (A:8-124) Ami 97.7 6E-06 4.4E-10 66.1 2.9 78 7-89 13-117 (117)
13 d1qxya_ d.127.1.1 (A:) Methion 97.1 1.1E-05 8.2E-10 72.8 -3.0 49 142-191 61-109 (249)
14 d1chma1 c.55.2.1 (A:2-156) Cre 96.3 0.00058 4.2E-08 56.7 2.0 79 4-87 38-155 (155)
15 d1kp0a1 c.55.2.1 (A:1-156) Cre 95.7 0.0021 1.6E-07 53.0 2.8 77 7-88 43-156 (156)
16 d1xgsa2 d.127.1.1 (A:1-194,A:2 94.6 0.088 6.4E-06 45.2 10.2 96 260-395 4-103 (218)
17 d2v3za2 d.127.1.1 (A:177-440) 93.1 0.15 1.1E-05 44.8 9.0 92 261-392 7-102 (264)
18 d1pv9a2 d.127.1.1 (A:125-345) 91.9 0.3 2.2E-05 41.6 8.9 95 262-394 9-105 (221)
19 d2gg2a1 d.127.1.1 (A:3-264) Me 89.9 1.4 9.9E-05 38.2 11.7 42 98-139 120-161 (262)
20 d1o0xa_ d.127.1.1 (A:) Methion 81.4 3.6 0.00026 34.8 9.7 98 262-394 13-115 (249)
21 d1l1pa_ d.26.1.1 (A:) Trigger 28.8 11 0.00078 27.8 1.7 35 220-254 8-46 (106)
22 d1t11a3 d.26.1.1 (A:135-247) T 24.2 17 0.0013 26.8 2.2 24 220-243 17-40 (113)
No 1
>d1pv9a2 d.127.1.1 (A:125-345) Aminopeptidase P, C-terminal domain {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=100.00 E-value=8.3e-49 Score=363.05 Aligned_cols=218 Identities=31% Similarity=0.542 Sum_probs=199.4
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHhccCCCCCHHHHHHHHHHHHHHcCCCCCCCCceeecCCCccccccccCCcccccCc
Q psy247 90 KSDSEQEMMRETCRIASEGFKETIGFSKPGRTEHELFTKFDYEVRMRGAQILAYPPVVASGDNANVIHYVHNNQKCCHGD 169 (413)
Q Consensus 90 Ks~~Ei~~~r~A~~i~~~~~~~~~~~~~~G~tE~el~~~~~~~~~~~G~~~~~~~~iv~sG~~~~~~~~~~~~~~~~~~~ 169 (413)
||++||++||+|++++++++..+++.++||+||.||.+.+.+.+++.|++...|.+
T Consensus 1 Ks~~EI~~mr~a~~i~~~~~~~~~~~i~~G~tE~ei~~~~~~~~~~~G~~~~~~~~------------------------ 56 (221)
T d1pv9a2 1 KTKEEIEIIEKACEIADKAVMAAIEEITEGKREREVAAKVEYLMKMNGAEKPAFDT------------------------ 56 (221)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHHTTCSEESSCC------------------------
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHhcccccccccc------------------------
Confidence 99999999999999999999999999999999999999999999999977554444
Q ss_pred ceecccccCCCCCCHHHHHhhhHHHHHhhcccccCCCceeccCCCccccccccCCccccCCCEEEEecceeeCcEEeceE
Q psy247 170 LLLMDAGFSKPGRTEHELFTKFDYEVRMRGAQILAYPPVVASGDNANVIHYVHNNQKCCHGDLLLMDAGCELNGYDSDIT 249 (413)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g~~~~~~h~~~~~~~i~~Gd~v~iD~g~~~~GY~aDit 249 (413)
++++|.+++.+|+.++++++++||+|++|+|+.++||++|++
T Consensus 57 --------------------------------------~v~~g~~~~~~h~~~~~~~i~~gd~v~id~~~~~~gy~~d~~ 98 (221)
T d1pv9a2 57 --------------------------------------IIASGHRSALPHGVASDKRIERGDLVVIDLGALYNHYNSDIT 98 (221)
T ss_dssp --------------------------------------EEEEGGGGGSTTCBCCSCBCCTTCEEEEEECEEETTEECCEE
T ss_pred --------------------------------------cccccccccccccccccccccccceEEEecccccCccccCcc
Confidence 455555666778888899999999999999999999999999
Q ss_pred EEEeecCCCCHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHH--HHHHcCc-ccccccccccCCCCccCCCCCCCCC
Q psy247 250 RTWPISGQFTDHQKVLYEIVLDTQLKLLKLCEKSDSALNFIYRYA--YVFQIGF-KFCPHHSSHYLGMDVHDCAAIPRTI 326 (413)
Q Consensus 250 RT~~v~G~~~~~~~~~~~~~~~a~~~~~~~lkp~G~~~~ei~~~~--~~~~~g~-~~~~h~~GHgiGl~~~E~p~~~~~~ 326 (413)
||+++ |+|+++|+++|+.++++++++++++|| |++++||++++ .+.+.|+ .++.|++||++|+++||.|.+.
T Consensus 99 Rt~~v-G~~~~~~~~~~~~~~~~~~~~~~~~kp-G~~~~~v~~~~~~~~~~~g~~~~~~~~~Ghg~g~~~~e~~~~~--- 173 (221)
T d1pv9a2 99 RTIVV-GSPNEKQREIYEIVLEAQKRAVEAAKP-GMTAKELDSIAREIIKEYGYGDYFIHSLGHGVGLEIHEWPRIS--- 173 (221)
T ss_dssp EEEES-SSCCHHHHHHHHHHHHHHHHHHHHCCT-TCBHHHHHHHHHHHHHHTTCGGGCCSCSEEECSSSSSEEEEES---
T ss_pred eeeec-CCccHHHHHHHHHHHHHHHHHHHHcCC-CCcHHHHHHHHHhhhhhcccCCceeccccCCCCcccchhcccc---
Confidence 99999 999999999999999999999999999 99999999998 6778888 5789999999999999998753
Q ss_pred CCCCCcceecCCCCccccCCCCCCCCCCCCCcEEEeCCeeeEcCCCCCcccccccceEEEceeEEEeCCCCcccCCCCCC
Q psy247 327 PVAPGVVFTVEPGMDVHDCAAIPRTIPVAPGMVFTVEPGVYISKDCKETRPEFRGMGIRIEDDILIDKSSNVENLSAMCP 406 (413)
Q Consensus 327 ~~~~g~~~~~~pg~~~~~~~~~~~~~~L~~GMv~~iEPgi~~~~~~~~~~~~~~~~gvriED~vlVt~~G~~e~Lt~~~p 406 (413)
..++.+|+|||||+|||++|.++. +|+|+||+|+||++|+ |+||+ +|
T Consensus 174 ---------------------~~~~~~L~~gMv~~iep~~~~~~~----------~g~r~Ed~v~Vte~G~-e~Lt~-~p 220 (221)
T d1pv9a2 174 ---------------------QYDETVLKEGMVITIEPGIYIPKL----------GGVRIEDTVLITENGA-KRLTK-TE 220 (221)
T ss_dssp ---------------------TTCCCBCCTTCEEEECCEEEETTT----------EEEECBEEEEECSSSE-EESCC-SC
T ss_pred ---------------------cCCCceeCCCcEEEECCEEEECCC----------CEEEEeEEEEECCCcc-eECCC-CC
Confidence 345789999999999999999886 7999999999999998 99998 68
Q ss_pred C
Q psy247 407 K 407 (413)
Q Consensus 407 ~ 407 (413)
|
T Consensus 221 r 221 (221)
T d1pv9a2 221 R 221 (221)
T ss_dssp C
T ss_pred C
Confidence 7
No 2
>d1o0xa_ d.127.1.1 (A:) Methionine aminopeptidase {Thermotoga maritima [TaxId: 2336]}
Probab=100.00 E-value=6.4e-47 Score=355.87 Aligned_cols=238 Identities=19% Similarity=0.205 Sum_probs=203.0
Q ss_pred HHccCCHHHHHHHHHHHHHHHHHHHHHHhccCCCCCHHHHHHHHHHHHHHcCCCCCCCCceeecCCCccccccccCCccc
Q psy247 86 LRLYKSDSEQEMMRETCRIASEGFKETIGFSKPGRTEHELFTKFDYEVRMRGAQILAYPPVVASGDNANVIHYVHNNQKC 165 (413)
Q Consensus 86 ~R~vKs~~Ei~~~r~A~~i~~~~~~~~~~~~~~G~tE~el~~~~~~~~~~~G~~~~~~~~iv~sG~~~~~~~~~~~~~~~ 165 (413)
||.|||++||++||+|++++++++..+.+.+++|+||.|+++.+.+.++++|++.....
T Consensus 1 m~~IKs~~Ei~~mr~A~~ia~~~~~~~~~~i~~G~te~ev~~~~~~~~~~~g~~~~~~~--------------------- 59 (249)
T d1o0xa_ 1 MIRIKTPSEIEKMKKAGKAVAVALREVRKVIVPGKTAWDVETLVLEIFKKLRVKPAFKG--------------------- 59 (249)
T ss_dssp CCCCCCHHHHHHHHHHHHHHHHHHHHGGGGCSTTCBHHHHHHHHHHHHHHHTCEESSTT---------------------
T ss_pred CCccCCHHHHHHHHHHHHHHHHHHHHHHHHCcCCCCHHHHHHHHHHHHHHhhhhhhccc---------------------
Confidence 58999999999999999999999999999999999999999999999999987632110
Q ss_pred ccCcceecccccCCCCCCHHHHHhhhHHHHHhhcccccCCCceeccCCCccccccc-cCCccccCCCEEEEecceeeCcE
Q psy247 166 CHGDLLLMDAGFSKPGRTEHELFTKFDYEVRMRGAQILAYPPVVASGDNANVIHYV-HNNQKCCHGDLLLMDAGCELNGY 244 (413)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g~~~~~~h~~-~~~~~i~~Gd~v~iD~g~~~~GY 244 (413)
..+++..++.+.+...+|+. ++++.+++||+|++|+|+.++||
T Consensus 60 ------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gd~v~id~g~~~~gy 103 (249)
T d1o0xa_ 60 ------------------------------------YGGYKYATCVSVNEEVVHGLPLKEKVFKEGDIVSVDVGAVYQGL 103 (249)
T ss_dssp ------------------------------------GGGCCCSEEEEETTBCSCCCCCTTCBCCTTCEEEEEEEEEETTE
T ss_pred ------------------------------------cccccccccccCcccccceeeccccccccccceeeecceeecce
Confidence 11233444455555566654 56888999999999999999999
Q ss_pred EeceEEEEeecCCCCHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHH--HHHHcCcccccccccccCCCCccCCCCC
Q psy247 245 DSDITRTWPISGQFTDHQKVLYEIVLDTQLKLLKLCEKSDSALNFIYRYA--YVFQIGFKFCPHHSSHYLGMDVHDCAAI 322 (413)
Q Consensus 245 ~aDitRT~~v~G~~~~~~~~~~~~~~~a~~~~~~~lkp~G~~~~ei~~~~--~~~~~g~~~~~h~~GHgiGl~~~E~p~~ 322 (413)
++|++||+++ |+|+++|+++|+.++++++++++++|| |++++||++++ .+.+.|+.++.|++||++|+.+||.|.+
T Consensus 104 ~~D~~RT~~~-G~~s~~~~~~~~~~~~a~~a~i~~~kp-G~~~~dv~~~~~~~~~~~g~~~~~~~~GHgiG~~~~~~p~~ 181 (249)
T d1o0xa_ 104 YGDAAVTYIV-GETDERGKELVRVTREVLEKAIKMIKP-GIRLGDVSHCIQETVESVGFNVIRDYVGHGVGRELHEDPQI 181 (249)
T ss_dssp EEEEEEEEES-SCCCHHHHHHHHHHHHHHHHHHHTCCT-TSBHHHHHHHHHHHHHHTTCEECCSSCEEECSSSSSEEEEE
T ss_pred ecccccceee-cCcChhhHHHHHHHHHHHHHHHHHcCC-CCCHHHHHHHHHHHHHhcCCeeecCCcccccccCCCcCCcc
Confidence 9999999999 999999999999999999999999999 99999999999 7778898878899999999999998875
Q ss_pred CCCCCCCCCcceecCCCCccccCCCCCCCCCCCCCcEEEeCCeeeEcCC-------CCCcccccccceEEEceeEEEeCC
Q psy247 323 PRTIPVAPGVVFTVEPGMDVHDCAAIPRTIPVAPGMVFTVEPGVYISKD-------CKETRPEFRGMGIRIEDDILIDKS 395 (413)
Q Consensus 323 ~~~~~~~~g~~~~~~pg~~~~~~~~~~~~~~L~~GMv~~iEPgi~~~~~-------~~~~~~~~~~~gvriED~vlVt~~ 395 (413)
.... ..+++.+|+|||||++||++|+++. .|......+.+|+|+||+|+||++
T Consensus 182 ~~~~--------------------~~~~~~~le~gMv~~iEp~~~~~~~~~~~~e~~~~~~~~~g~~g~r~Ed~v~VTe~ 241 (249)
T d1o0xa_ 182 PNYG--------------------TPGTGVVLRKGMTLAIEPMVSEGDWRVVVKEDGWTAVTVDGSRCAHFEHTILITEN 241 (249)
T ss_dssp CSCC--------------------CTTCSCBCCTTCEEEECCEEESSCCCEEECTTSSCEEETTCCCEEECBEEEEECSS
T ss_pred ceec--------------------cCCCCccccCCeEEEecceeecCCCceEEccCCcEEEeeCCcceEEeceEEEEcCC
Confidence 4211 0346789999999999999997653 344555555679999999999999
Q ss_pred CCcccCCC
Q psy247 396 SNVENLSA 403 (413)
Q Consensus 396 G~~e~Lt~ 403 (413)
|+ |+||+
T Consensus 242 G~-e~LTk 248 (249)
T d1o0xa_ 242 GA-EILTK 248 (249)
T ss_dssp SE-EESSC
T ss_pred cC-eeCCC
Confidence 99 99997
No 3
>d2v3za2 d.127.1.1 (A:177-440) Aminopeptidase P, C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=100.00 E-value=1.9e-46 Score=356.29 Aligned_cols=234 Identities=38% Similarity=0.642 Sum_probs=206.8
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHhccCCCCCHHHHHHHHHHHHHHcCCCCCCCCceeecCCCccccccccCCcccccCcc
Q psy247 91 SDSEQEMMRETCRIASEGFKETIGFSKPGRTEHELFTKFDYEVRMRGAQILAYPPVVASGDNANVIHYVHNNQKCCHGDL 170 (413)
Q Consensus 91 s~~Ei~~~r~A~~i~~~~~~~~~~~~~~G~tE~el~~~~~~~~~~~G~~~~~~~~iv~sG~~~~~~~~~~~~~~~~~~~~ 170 (413)
||+||++||+|++++++++.++.+.++||+||.||++.+...+.++|++..+|.+++.
T Consensus 1 Sp~EI~~~r~A~~i~~~~~~~~~~~i~~G~te~ei~~~~~~~~~~~G~~~~~~~~~~~---------------------- 58 (264)
T d2v3za2 1 SPEEIAVLRRAGEITAMAHTRAMEKCRPGMFEYHLEGEIHHEFNRHGARYPSYNTIVG---------------------- 58 (264)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHHTTCCEESSCCEEE----------------------
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHcCCCCcccccccc----------------------
Confidence 7999999999999999999999999999999999999999999999987655555544
Q ss_pred eecccccCCCCCCHHHHHhhhHHHHHhhcccccCCCceeccCCCccccccccCCccccCCCEEEEecceeeCcEEeceEE
Q psy247 171 LLMDAGFSKPGRTEHELFTKFDYEVRMRGAQILAYPPVVASGDNANVIHYVHNNQKCCHGDLLLMDAGCELNGYDSDITR 250 (413)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g~~~~~~h~~~~~~~i~~Gd~v~iD~g~~~~GY~aDitR 250 (413)
+|.+++.+|+.++++++++||++++|+|+.|+||++|++|
T Consensus 59 ----------------------------------------~g~~~~~~h~~~~~~~l~~gd~v~vd~g~~~~gY~~d~~R 98 (264)
T d2v3za2 59 ----------------------------------------SGENGCILHYTENECEMRDGDLVLIDAGCEYKGYAGDITR 98 (264)
T ss_dssp ----------------------------------------EGGGGGSTTCCCCCSBCCTTCEEEEEECEEETTEECCEEE
T ss_pred ----------------------------------------CCCCccccccccCccccccccceeEEeeeccCCeeccceE
Confidence 4555566777788889999999999999999999999999
Q ss_pred EEeecCCCCHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHH--HHHH------------------cCc-cccccccc
Q psy247 251 TWPISGQFTDHQKVLYEIVLDTQLKLLKLCEKSDSALNFIYRYA--YVFQ------------------IGF-KFCPHHSS 309 (413)
Q Consensus 251 T~~v~G~~~~~~~~~~~~~~~a~~~~~~~lkp~G~~~~ei~~~~--~~~~------------------~g~-~~~~h~~G 309 (413)
|++++|+++++|+++|+.+.++++.+++++|| |++++|+++++ .+.+ .++ .++.|++|
T Consensus 99 t~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~p-G~~~~di~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~G 177 (264)
T d2v3za2 99 TFPVNGKFTQAQREIYDIVLESLETSLRLYRP-GTSILEVTGEVVRIMVSGLVKLGILKGDVDELIAQNAHRPFFMHGLS 177 (264)
T ss_dssp EEETTSCCCHHHHHHHHHHHHHHHHHHHHCCT-TCCHHHHHHHHHHHHHHHHHHHTSSCSCHHHHHHTTTTTTTCCSCSC
T ss_pred EEEECCcCcHHHHHHHHhHHHHHHHHHhhhcc-ccchhhHHHHHHHHHHHhhhhhCCcccchhhhhcccccCCceeeCCC
Confidence 99998899999999999999999999999999 99999999987 2211 112 46789999
Q ss_pred ccCCCCccCCCCCCCCCCCCCCcceecCCCCccccCCCCCCCCCCCCCcEEEeCCeeeEcCCCCCcccccccceEEEcee
Q psy247 310 HYLGMDVHDCAAIPRTIPVAPGVVFTVEPGMDVHDCAAIPRTIPVAPGMVFTVEPGVYISKDCKETRPEFRGMGIRIEDD 389 (413)
Q Consensus 310 HgiGl~~~E~p~~~~~~~~~~g~~~~~~pg~~~~~~~~~~~~~~L~~GMv~~iEPgi~~~~~~~~~~~~~~~~gvriED~ 389 (413)
|++|.+.|+.|.+. .+.+.+|+|||||+|||++|+++. +.+.++++++|+|+||+
T Consensus 178 ~~~~~~~~e~p~~~------------------------~~~~~~L~~gMv~~iEP~i~~~~~-~~~~~~~~~~Gvr~Edt 232 (264)
T d2v3za2 178 HWLGLDVHDVGVYG------------------------QDRSRILEPGMVLTVAPGLYIAPD-AEVPEQYRGIGIRIEDD 232 (264)
T ss_dssp CBCSSSSSCCSCCC------------------------GGGCCCCCTTCEEEECCEEEECTT-CSSCGGGTTEEEECBEE
T ss_pred CccccCcccccccc------------------------cccccccCCCcEEeecCCEEecCC-ceeeecCCeeEEEEeeE
Confidence 99999999988754 345789999999999999999875 55778888999999999
Q ss_pred EEEeCCCCcccCCCCCCCCccccC
Q psy247 390 ILIDKSSNVENLSAMCPKNIDEIE 413 (413)
Q Consensus 390 vlVt~~G~~e~Lt~~~p~~~~~ie 413 (413)
|+||++|+ |+||...|+++++||
T Consensus 233 vlVTedG~-E~LT~~~p~~~~~ie 255 (264)
T d2v3za2 233 IVITETGN-ENLTASVVKKPEEIE 255 (264)
T ss_dssp EEEETTEE-EESSTTSCCSHHHHH
T ss_pred EEECCCCC-eeCCCCCCCCHHHHH
Confidence 99999999 999987899999886
No 4
>d1chma2 d.127.1.1 (A:157-402) Creatinase, catalytic (C-terminal) domain {Pseudomonas putida [TaxId: 303]}
Probab=100.00 E-value=2.2e-46 Score=352.06 Aligned_cols=238 Identities=19% Similarity=0.229 Sum_probs=205.5
Q ss_pred ccCCHHHHHHHHHHHHHHHHHHHHHHhccCCCCCHHHHHHHHHHHHHHcCCCCCCCCceeecCCCccccccccCCccccc
Q psy247 88 LYKSDSEQEMMRETCRIASEGFKETIGFSKPGRTEHELFTKFDYEVRMRGAQILAYPPVVASGDNANVIHYVHNNQKCCH 167 (413)
Q Consensus 88 ~vKs~~Ei~~~r~A~~i~~~~~~~~~~~~~~G~tE~el~~~~~~~~~~~G~~~~~~~~iv~sG~~~~~~~~~~~~~~~~~ 167 (413)
+|||++||++||+|++++++++.++++.++||+||.||++.+.+.+++.|++....
T Consensus 1 ~IKs~~Ei~~iR~a~~i~~~~~~~~~~~i~~G~te~ei~~~~~~~~~~~g~~~~~~------------------------ 56 (246)
T d1chma2 1 MIKSAEEHVMIRHGARIADIGGAAVVEALGDQVPEYEVALHATQAMVRAIADTFED------------------------ 56 (246)
T ss_dssp TSCCHHHHHHHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHHHHHHHCSS------------------------
T ss_pred CcCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHhcCcccCc------------------------
Confidence 58999999999999999999999999999999999999999999999988652211
Q ss_pred CcceecccccCCCCCCHHHHHhhhHHHHHhhcccccCCCceeccCCCccccccccCCccccCCCEEEEecceeeCcEEec
Q psy247 168 GDLLLMDAGFSKPGRTEHELFTKFDYEVRMRGAQILAYPPVVASGDNANVIHYVHNNQKCCHGDLLLMDAGCELNGYDSD 247 (413)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g~~~~~~h~~~~~~~i~~Gd~v~iD~g~~~~GY~aD 247 (413)
....+|.+++.+|.++..+|+.++++++++||+|++|+|+.|+||++|
T Consensus 57 --------------------------------~~~~~~~~~~~~g~~~~~~h~~~~~~~~~~gd~v~~d~g~~~~gY~~d 104 (246)
T d1chma2 57 --------------------------------VELMDTWTWFQSGINTDGAHNPVTTRKVNKGDILSLNCFPMIAGYYTA 104 (246)
T ss_dssp --------------------------------CCBCCCEEEEEEGGGGGSTTCCEESCBCCTTCEEEEEEECEETTEECC
T ss_pred --------------------------------cccccccccccccCccccccccCCCccccCCCEEEEeecccccccccc
Confidence 112356677788888889999999999999999999999999999999
Q ss_pred eEEEEeecCCCCHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHH--HHHHcCc-ccccccccccCCCCccCCCCCCC
Q psy247 248 ITRTWPISGQFTDHQKVLYEIVLDTQLKLLKLCEKSDSALNFIYRYA--YVFQIGF-KFCPHHSSHYLGMDVHDCAAIPR 324 (413)
Q Consensus 248 itRT~~v~G~~~~~~~~~~~~~~~a~~~~~~~lkp~G~~~~ei~~~~--~~~~~g~-~~~~h~~GHgiGl~~~E~p~~~~ 324 (413)
++||+++ |+|+++|+++|+.++++++++++++|| |++++||++++ .+.+.|+ .++.|++||++|+..|+.|....
T Consensus 105 ~~Rt~~~-G~~~~~~~~~~~~~~~~~~~~~~~~kp-G~~~~~v~~a~~~~~~~~g~~~~~~~~~ghg~G~~~~~~~~~~~ 182 (246)
T d1chma2 105 LERTLFL-DHCSDDHLRLWQVNVEVHEAGLKLIKP-GARCSDIARELNEIFLKHDVLQYRTFGYGHSFGTLSHYYGREAG 182 (246)
T ss_dssp EEEEEEE-SCCCHHHHHHHHHHHHHHHHHHHHCCT-TCBHHHHHHHHHHHHHHHTCGGGBCSCSCBBCSBEETTEECCTT
T ss_pred eeecccc-ccchhhHHHHHHHHHHHHHHHHHHhhc-ccccchhhhhhhhhHHhhccccccccccccccCccccccccccc
Confidence 9999999 999999999999999999999999999 99999999998 6678888 57789999999998888764321
Q ss_pred CCCCCCCcceecCCCCccccCCCCCCCCCCCCCcEEEeCCeeeEcCCCCCcccccccceEEEceeEEEeCCCCcccCCCC
Q psy247 325 TIPVAPGVVFTVEPGMDVHDCAAIPRTIPVAPGMVFTVEPGVYISKDCKETRPEFRGMGIRIEDDILIDKSSNVENLSAM 404 (413)
Q Consensus 325 ~~~~~~g~~~~~~pg~~~~~~~~~~~~~~L~~GMv~~iEPgi~~~~~~~~~~~~~~~~gvriED~vlVt~~G~~e~Lt~~ 404 (413)
+ .+. .+++.+|+|||||+|||++|.+.... ..+|+|+||+|+||++|+ |+||+
T Consensus 183 ~---------~~~----------~~~~~~L~~GMv~~iEp~i~~~~~~~------g~gG~r~Ed~v~Vte~G~-e~LT~- 235 (246)
T d1chma2 183 L---------ELR----------EDIDTVLEPGMVVSMEPMIMLPEGLP------GAGGYREHDILIVNENGA-ENITK- 235 (246)
T ss_dssp S---------BCC----------TTCCCBCCTTCEEEECCEEEECTTST------TCEEEECBEEEEEETTEE-EECCC-
T ss_pred c---------ccc----------CCCceecCCCCEEEEcCeEEccCCCC------cccEEEEEEEEEECCCcc-EECCC-
Confidence 0 011 24678999999999999999875411 115899999999999999 99998
Q ss_pred CCCCcc
Q psy247 405 CPKNID 410 (413)
Q Consensus 405 ~p~~~~ 410 (413)
+|++++
T Consensus 236 ~P~~~~ 241 (246)
T d1chma2 236 FPYGPE 241 (246)
T ss_dssp SCCSHH
T ss_pred CCCChh
Confidence 799764
No 5
>d1qxya_ d.127.1.1 (A:) Methionine aminopeptidase {Staphylococcus aureus [TaxId: 1280]}
Probab=100.00 E-value=2.1e-46 Score=352.75 Aligned_cols=237 Identities=17% Similarity=0.187 Sum_probs=207.7
Q ss_pred ccCCHHHHHHHHHHHHHHHHHHHHHHhccCCCCCHHHHHHHHHHHHHHcCCCCCCCCceeecCCCccccccccCCccccc
Q psy247 88 LYKSDSEQEMMRETCRIASEGFKETIGFSKPGRTEHELFTKFDYEVRMRGAQILAYPPVVASGDNANVIHYVHNNQKCCH 167 (413)
Q Consensus 88 ~vKs~~Ei~~~r~A~~i~~~~~~~~~~~~~~G~tE~el~~~~~~~~~~~G~~~~~~~~iv~sG~~~~~~~~~~~~~~~~~ 167 (413)
+|||++||++||+|++|+++++..+++.++||+||.||++.+++.++++|+...
T Consensus 2 ~IKs~~Ei~~~R~A~~i~~~~~~~~~~~i~~G~se~ei~~~~~~~~~~~~a~~~-------------------------- 55 (249)
T d1qxya_ 2 IVKTEEELQALKEIGYICAKVRNTMQAATKPGITTKELDNIAKELFEEYGAISA-------------------------- 55 (249)
T ss_dssp BCCSHHHHHHHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHHHTCEEH--------------------------
T ss_pred EeCCHHHHHHHHHHHHHHHHHHHHHHHHCcCCCcHHHHHHHHHHHHHHhhhhhc--------------------------
Confidence 699999999999999999999999999999999999999999999999886521
Q ss_pred CcceecccccCCCCCCHHHHHhhhHHHHHhhcccccCCCceeccCCCccccccccCCccccCCCEEEEecceeeCcEEec
Q psy247 168 GDLLLMDAGFSKPGRTEHELFTKFDYEVRMRGAQILAYPPVVASGDNANVIHYVHNNQKCCHGDLLLMDAGCELNGYDSD 247 (413)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g~~~~~~h~~~~~~~i~~Gd~v~iD~g~~~~GY~aD 247 (413)
+....+|++++++|.++..+|+.++++++++||+|++|+|+.|+||++|
T Consensus 56 -------------------------------~~~~~~~~~~~~~g~~~~~~h~~~~~~~l~~Gd~v~id~g~~~~gY~~d 104 (249)
T d1qxya_ 56 -------------------------------PIHDENFPGQTCISVNEEVAHGIPSKRVIREGDLVNIDVSALKNGYYAD 104 (249)
T ss_dssp -------------------------------HHHHHCCSSSSEEEETTEEECCCCCSCBCCTTCEEEEEEEEEETTEEEE
T ss_pred -------------------------------ccccccccccccccccccccccccCCceecCCCceEEeeeeEECCEecc
Confidence 0113468888999999999999999999999999999999999999999
Q ss_pred eEEEEeecCCC-CHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHH--HHHHcCcccccccccccCCCCccCCCCCCC
Q psy247 248 ITRTWPISGQF-TDHQKVLYEIVLDTQLKLLKLCEKSDSALNFIYRYA--YVFQIGFKFCPHHSSHYLGMDVHDCAAIPR 324 (413)
Q Consensus 248 itRT~~v~G~~-~~~~~~~~~~~~~a~~~~~~~lkp~G~~~~ei~~~~--~~~~~g~~~~~h~~GHgiGl~~~E~p~~~~ 324 (413)
++||+++ |++ +++++++|+.++++++++++++|| |++++++++++ ...+.+..++.|.+||++|+..|+.|....
T Consensus 105 ~~Rt~~~-G~~~~~~~~~~~~~~~~~~~~~~~~~kp-G~~~~~v~~~~~~~~~~~~~~~~~~~~gh~~G~~~~~~p~~~~ 182 (249)
T d1qxya_ 105 TGISFVV-GESDDPMKQKVCDVATMAFENAIAKVKP-GTKLSNIGKAVHNTARQNDLKVIKNLTGHGVGLSLHEAPAHVL 182 (249)
T ss_dssp EEEEEEC-SCCSCTHHHHHHHHHHHHHHHHHTTCCT-TCBTHHHHHHHHHHHHHTTCEECTTCCEEECSSSSSEEEEEEC
T ss_pred ccccccc-CCCcchhhhHHHHHHHHHhhhhHhhccC-CceeehhhhhhhhhhccccceeeecccccccccccccCCcccc
Confidence 9999999 655 557888999999999999999999 99999999988 444556677899999999999999886321
Q ss_pred CCCCCCCcceecCCCCccccCCCCCCCCCCCCCcEEEeCCeeeEcC-------CCCCcccccccceEEEceeEEEeCCCC
Q psy247 325 TIPVAPGVVFTVEPGMDVHDCAAIPRTIPVAPGMVFTVEPGVYISK-------DCKETRPEFRGMGIRIEDDILIDKSSN 397 (413)
Q Consensus 325 ~~~~~~g~~~~~~pg~~~~~~~~~~~~~~L~~GMv~~iEPgi~~~~-------~~~~~~~~~~~~gvriED~vlVt~~G~ 397 (413)
.. + ..+++.+|+|||||+|||++|.++ +.|.+..+++++|+|+||||+||++|+
T Consensus 183 ~~---------~----------~~~~~~~Le~GMV~~iEP~i~~~~~~~~~~~~~~~~~~~~~~~g~r~EdtvlVTe~G~ 243 (249)
T d1qxya_ 183 NY---------F----------DPKDKTLLTEGMVLAIEPFISSNASFVTEGKNEWAFETSDKSFVAQIEHTVIVTKDGP 243 (249)
T ss_dssp SS---------C----------CTTCCCBCCTTBEEEECCEEESSCSSCEECSSSSCEECTTCCCEEEEEEEEECCTTCC
T ss_pred cc---------c----------cccCCccccCCceEEEeeeEecCCcceeecCCCceEEecCCCeEEEEeeEEEEcCCcc
Confidence 00 0 134678999999999999999775 467788888999999999999999999
Q ss_pred cccCCC
Q psy247 398 VENLSA 403 (413)
Q Consensus 398 ~e~Lt~ 403 (413)
|+||+
T Consensus 244 -e~LT~ 248 (249)
T d1qxya_ 244 -ILTTK 248 (249)
T ss_dssp -EETTC
T ss_pred -EeCCC
Confidence 99997
No 6
>d2gg2a1 d.127.1.1 (A:3-264) Methionine aminopeptidase {Escherichia coli [TaxId: 562]}
Probab=100.00 E-value=1.8e-45 Score=349.00 Aligned_cols=245 Identities=22% Similarity=0.267 Sum_probs=212.5
Q ss_pred ccCCHHHHHHHHHHHHHHHHHHHHHHhccCCCCCHHHHHHHHHHHHHHcCCCCCCCCceeecCCCccccccccCCccccc
Q psy247 88 LYKSDSEQEMMRETCRIASEGFKETIGFSKPGRTEHELFTKFDYEVRMRGAQILAYPPVVASGDNANVIHYVHNNQKCCH 167 (413)
Q Consensus 88 ~vKs~~Ei~~~r~A~~i~~~~~~~~~~~~~~G~tE~el~~~~~~~~~~~G~~~~~~~~iv~sG~~~~~~~~~~~~~~~~~ 167 (413)
+|||++||++||+|+++++++++++++.++||+||.||++.+...+++.|.....+
T Consensus 2 ~IKs~~EI~~~R~A~~i~~~~~~~~~~~i~~G~se~ei~~~~~~~~~~~g~~~~~~------------------------ 57 (262)
T d2gg2a1 2 SIKTPEDIEKMRVAGRLAAEVLEMIEPYVKPGVSTGELDRICNDYIVNEQHAVSAC------------------------ 57 (262)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHHHGGGCSTTCBHHHHHHHHHHHHHHTSCCEESS------------------------
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHCcCCCCHHHHHHHHHHHHHHhCCCcccc------------------------
Confidence 69999999999999999999999999999999999999999998888887542211
Q ss_pred CcceecccccCCCCCCHHHHHhhhHHHHHhhcccccCCCceeccCCCccccccccCC-ccccCCCEEEEecceeeCcEEe
Q psy247 168 GDLLLMDAGFSKPGRTEHELFTKFDYEVRMRGAQILAYPPVVASGDNANVIHYVHNN-QKCCHGDLLLMDAGCELNGYDS 246 (413)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g~~~~~~h~~~~~-~~i~~Gd~v~iD~g~~~~GY~a 246 (413)
....+|++++.+|.+.+.+|+.+++ +++++||+|++|+|+.|+||++
T Consensus 58 --------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Gd~v~id~g~~~~gY~~ 105 (262)
T d2gg2a1 58 --------------------------------LGYHGYPKSVCISINEVVCHGIPDDAKLLKDGDIVNIDVTVIKDGFHG 105 (262)
T ss_dssp --------------------------------TTGGGCCSSSEEEETTEEECCCCCTTCBCCTTCEEEEEEEEEETTEEE
T ss_pred --------------------------------ccccCCCceeecccCceeecCCCCCCeeccCCCEEEEEeeEEECCEEE
Confidence 1124688888889999998988764 6789999999999999999999
Q ss_pred ceEEEEeecCCCCHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHH--HHHHcCcccccccccccCCCCccCCCCCCC
Q psy247 247 DITRTWPISGQFTDHQKVLYEIVLDTQLKLLKLCEKSDSALNFIYRYA--YVFQIGFKFCPHHSSHYLGMDVHDCAAIPR 324 (413)
Q Consensus 247 DitRT~~v~G~~~~~~~~~~~~~~~a~~~~~~~lkp~G~~~~ei~~~~--~~~~~g~~~~~h~~GHgiGl~~~E~p~~~~ 324 (413)
|++||+++ |+++++|+++|+.++++++++++++|| |++++||++++ .+.+.|+..+.|.+||++|...++.|.+..
T Consensus 106 d~~Rt~~~-G~~~~~~~~~~~~~~~a~~~~~~~ikp-G~~~~dv~~a~~~~~~~~g~~~~~~~~g~g~g~~~~~~p~~~~ 183 (262)
T d2gg2a1 106 DTSKMFIV-GKPTIMGERLCRITQESLYLALRMVKP-GINLREIGAAIQKFVEAEGFSVVREYCGHGIGRGFHEEPQVLH 183 (262)
T ss_dssp EEEEEEEC-SSCCHHHHHHHHHHHHHHHHHHHHCST-TCBHHHHHHHHHHHHHHTTCEECSSCCEEECSSSSSEEEEECS
T ss_pred EEEeeeec-ccccccchhHHHHHHHHHHHHHHhhCC-CCcHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCCCcccc
Confidence 99999988 999999999999999999999999999 99999999998 678899987889999999999999887542
Q ss_pred CCCCCCCcceecCCCCccccCCCCCCCCCCCCCcEEEeCCeeeEcC-------CCCCcccccccceEEEceeEEEeCCCC
Q psy247 325 TIPVAPGVVFTVEPGMDVHDCAAIPRTIPVAPGMVFTVEPGVYISK-------DCKETRPEFRGMGIRIEDDILIDKSSN 397 (413)
Q Consensus 325 ~~~~~~g~~~~~~pg~~~~~~~~~~~~~~L~~GMv~~iEPgi~~~~-------~~~~~~~~~~~~gvriED~vlVt~~G~ 397 (413)
.. ....+.+|+|||||+|||++|+.. ++|.+..+++++|+|+||+|+||++|+
T Consensus 184 ~~--------------------~~~~~~~L~~gmv~~iEp~~~~~~~~~~~~~d~~~v~~~~~~~g~r~Ed~vlVTe~G~ 243 (262)
T d2gg2a1 184 YD--------------------SRETNVVLKPGMTFTIEPMVNAGKKEIRTMKDGWTVKTKDRSLSAQYEHTIVVTDNGC 243 (262)
T ss_dssp SC--------------------CTTCCCBCCTTCEEEECCEEESSCSCEEECTTSSCEEETTCCCEEECBEEEEEETTEE
T ss_pred cc--------------------ccccceEecCCeEEEeccccccCCCceEEcCCCCeEEeecCCcEEEEeeEEEECCCcC
Confidence 11 034678999999999999998753 457777788889999999999999998
Q ss_pred cccCCCCCCCCccc
Q psy247 398 VENLSAMCPKNIDE 411 (413)
Q Consensus 398 ~e~Lt~~~p~~~~~ 411 (413)
|+||..-|++++.
T Consensus 244 -e~LT~~~~~~~~~ 256 (262)
T d2gg2a1 244 -EILTLRKDDTIPA 256 (262)
T ss_dssp -EESSCCTTCCSCS
T ss_pred -EeCCCCCcccchH
Confidence 9999854444543
No 7
>d1xgsa2 d.127.1.1 (A:1-194,A:272-295) Methionine aminopeptidase {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=100.00 E-value=6e-43 Score=323.22 Aligned_cols=213 Identities=20% Similarity=0.271 Sum_probs=181.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHhccCCCCCHHHHHHHHHHHHHHcCCCCCCCCceeecCCCccccccccCCcccccCcceec
Q psy247 94 EQEMMRETCRIASEGFKETIGFSKPGRTEHELFTKFDYEVRMRGAQILAYPPVVASGDNANVIHYVHNNQKCCHGDLLLM 173 (413)
Q Consensus 94 Ei~~~r~A~~i~~~~~~~~~~~~~~G~tE~el~~~~~~~~~~~G~~~~~~~~iv~sG~~~~~~~~~~~~~~~~~~~~~~~ 173 (413)
||++||+|++|++++++++++.++||+||.||++.+.+.++++|++ .+|++++++|.++
T Consensus 2 EIe~~r~A~~ia~~~~~~~~~~i~pG~te~el~~~~~~~~~~~G~~-~~~~~~~~~~~~~-------------------- 60 (218)
T d1xgsa2 2 DTEKLMKAGEIAKKVREKAIKLARPGMLLLELAESIEKMIMELGGK-PAFPVNLSINEIA-------------------- 60 (218)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHHTTCE-ESSCCEEEETTEE--------------------
T ss_pred cHHHHHHHHHHHHHHHHHHHHHCcCCCCHHHHHHHHHHHHHHhhcc-cccceeecccccc--------------------
Confidence 8999999999999999999999999999999999999999999986 3566655555433
Q ss_pred ccccCCCCCCHHHHHhhhHHHHHhhcccccCCCceeccCCCccccc-cccCCccccCCCEEEEecceeeCcEEeceEEEE
Q psy247 174 DAGFSKPGRTEHELFTKFDYEVRMRGAQILAYPPVVASGDNANVIH-YVHNNQKCCHGDLLLMDAGCELNGYDSDITRTW 252 (413)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g~~~~~~h-~~~~~~~i~~Gd~v~iD~g~~~~GY~aDitRT~ 252 (413)
+..| +.+++++|++||+|++|+|+.|+||++|++||+
T Consensus 61 ------------------------------------------~~~~~~~~~~r~l~~Gd~v~iD~g~~~~gY~aD~~Rt~ 98 (218)
T d1xgsa2 61 ------------------------------------------AHYTPYKGDTTVLKEGDYLKIDVGVHIDGFIADTAVTV 98 (218)
T ss_dssp ------------------------------------------ECCCCCTTCCCBCCTTCEEEEEEEEEETTEEEEEEEEE
T ss_pred ------------------------------------------cccccccCCCeeeecCCeeEeeeccccccccccccceE
Confidence 2222 334678899999999999999999999999999
Q ss_pred eecCCCCHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHH--HHHHcCcccccccccccCC-CCccCCCCCCCCCCCC
Q psy247 253 PISGQFTDHQKVLYEIVLDTQLKLLKLCEKSDSALNFIYRYA--YVFQIGFKFCPHHSSHYLG-MDVHDCAAIPRTIPVA 329 (413)
Q Consensus 253 ~v~G~~~~~~~~~~~~~~~a~~~~~~~lkp~G~~~~ei~~~~--~~~~~g~~~~~h~~GHgiG-l~~~E~p~~~~~~~~~ 329 (413)
++ |++. +++|+++.++++++++++|| |+++++|++++ .+.+.|+..+.|++||+|| +..|+.|.++.+.
T Consensus 99 ~~-~~~~---~~~~~~~~~~~~~~~~~~kp-G~~~~~i~~~~~~~~~~~g~~~~~~~~GHgiG~~~~~~~~~~~~~~--- 170 (218)
T d1xgsa2 99 RV-GMEE---DELMEAAKEALNAAISVARA-GVEIKELGKAIENEIRKRGFKPIVNLSGHKIERYKLHAGISIPNIY--- 170 (218)
T ss_dssp ET-TSCC---CHHHHHHHHHHHHHHHHCST-TCBTHHHHHHHHHHHHTTTCEECTTCCEEECBTTBSSCSCEECSSC---
T ss_pred ee-chhh---hhhhhhhhHHHHHHHHhhhc-CCchhhccchHHHHHHHhCCccccccccccccCcccccCccccccc---
Confidence 98 6554 46789999999999999999 99999999998 6778888777899999999 6777887764321
Q ss_pred CCcceecCCCCccccCCCCCCCCCCCCCcEEEeCCeeeEcCCCCCcccccccceEEEceeEEEeCCCCcccCCC
Q psy247 330 PGVVFTVEPGMDVHDCAAIPRTIPVAPGMVFTVEPGVYISKDCKETRPEFRGMGIRIEDDILIDKSSNVENLSA 403 (413)
Q Consensus 330 ~g~~~~~~pg~~~~~~~~~~~~~~L~~GMv~~iEPgi~~~~~~~~~~~~~~~~gvriED~vlVt~~G~~e~Lt~ 403 (413)
..+.+.+|+|||||+|||++|+++. .|+++|+||||+||++|+ |+||+
T Consensus 171 -----------------~~~~~~~le~GmV~tiEP~i~~~~~--------~g~~~r~Ed~v~Vt~~G~-e~LT~ 218 (218)
T d1xgsa2 171 -----------------RPHDNYVLKEGDVFAIEPFATIGAR--------NGIVAQFEHTIIVEKDSV-IVTTE 218 (218)
T ss_dssp -----------------CTTCCCBCCTTCEEEECCEEESSCT--------CCCEEECBEEEEECSSSE-EETTC
T ss_pred -----------------ccCCccEecCCCEEEECCEEEeCCC--------CeEEEEEeeEEEEcCCce-EECCC
Confidence 1346789999999999999998764 246789999999999998 99995
No 8
>d1b6aa2 d.127.1.1 (A:110-374,A:449-478) Methionine aminopeptidase {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00 E-value=1.2e-37 Score=300.29 Aligned_cols=230 Identities=18% Similarity=0.106 Sum_probs=186.5
Q ss_pred HHccCCHHHHHHHHHHHHHHHHHHHHHHhccCCCCCHHHHHHHHHHHHHHcCCCCCCCCceeecCCCccccccccCCccc
Q psy247 86 LRLYKSDSEQEMMRETCRIASEGFKETIGFSKPGRTEHELFTKFDYEVRMRGAQILAYPPVVASGDNANVIHYVHNNQKC 165 (413)
Q Consensus 86 ~R~vKs~~Ei~~~r~A~~i~~~~~~~~~~~~~~G~tE~el~~~~~~~~~~~G~~~~~~~~iv~sG~~~~~~~~~~~~~~~ 165 (413)
.+..|+++||+.||+|++|+++++.++.+.++|||||.||++.+++.+++.|++... ..
T Consensus 48 ~~~~~~~~ei~~mR~Aa~Ia~~~~~~~~~~i~pG~te~el~~~~e~~~~~~g~~~~~-~~-------------------- 106 (295)
T d1b6aa2 48 ALDQASEEIWNDFREAAEAHRQVRKYVMSWIKPGMTMIEICEKLEDCSRKLIKENGL-NA-------------------- 106 (295)
T ss_dssp HHHHHTHHHHHHHHHHHHHHHHHHHHHHHHCCTTSBHHHHHHHHHHHHHHHHTCBTT-TE--------------------
T ss_pred HHHhCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCcHHHHHHHHHHHHHHhccccCc-cc--------------------
Confidence 344699999999999999999999999999999999999999999999999876321 11
Q ss_pred ccCcceecccccCCCCCCHHHHHhhhHHHHHhhcccccCCCceeccCCCcccccccc---CCccccCCCEEEEecceeeC
Q psy247 166 CHGDLLLMDAGFSKPGRTEHELFTKFDYEVRMRGAQILAYPPVVASGDNANVIHYVH---NNQKCCHGDLLLMDAGCELN 242 (413)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g~~~~~~h~~~---~~~~i~~Gd~v~iD~g~~~~ 242 (413)
+.+||. +++.|.+.+|+.| ++++|++||+|++|+|+.|+
T Consensus 107 ------------------------------------~~afp~--~~~~n~~~~H~~p~~~~~~~l~~GD~v~iD~g~~~~ 148 (295)
T d1b6aa2 107 ------------------------------------GLAFPT--GCSLNNCAAHYTPNAGDTTVLQYDDICKIDFGTHIS 148 (295)
T ss_dssp ------------------------------------EEEEEE--EEEETTEEECCCCCTTCCCBCCTTCCEEEEEEEEET
T ss_pred ------------------------------------ccCCcc--cccccceecccccccccchhccCCcceEEEeeeccc
Confidence 123442 4456777889877 58999999999999999999
Q ss_pred cEEeceEEEEeecCCCCHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHH--HHHH-------cCc--cccccccccc
Q psy247 243 GYDSDITRTWPISGQFTDHQKVLYEIVLDTQLKLLKLCEKSDSALNFIYRYA--YVFQ-------IGF--KFCPHHSSHY 311 (413)
Q Consensus 243 GY~aDitRT~~v~G~~~~~~~~~~~~~~~a~~~~~~~lkp~G~~~~ei~~~~--~~~~-------~g~--~~~~h~~GHg 311 (413)
||++|+|||+++ |+ .+.++++++++++++++++++| |+++.++..++ .... .++ ....+.+||+
T Consensus 149 gY~sD~trT~~~-g~---~~~~~~~~~~~~~~~a~~~~~~-g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gHg 223 (295)
T d1b6aa2 149 GRIIDCAFTVTF-NP---KYDTLLKAVKDATNTGIKCAGI-DVRLCDVGEAIQEVMESYEVEIDGKTYQVKPIRNLNGHS 223 (295)
T ss_dssp TEEEEEEEEECS-SG---GGHHHHHHHHHHHHHHHHHCCT-TCBHHHHHHHHHHHHHTCEEEETTEEEECEECTTCEEEE
T ss_pred cccccceeeeee-cc---chhHHHHHHHHHhhhhhhcccc-cccccchHHHHHHHHHhhhhhhhhccCcccceecccccc
Confidence 999999999998 53 4567788899999999999999 99999999887 2222 122 2344568999
Q ss_pred CCCCccCCCCCCCCCCCCCCcceecCCCCccccCCCCCCCCCCCCCcEEEeCCeeeEcCCCCCcccccccceEEEceeEE
Q psy247 312 LGMDVHDCAAIPRTIPVAPGVVFTVEPGMDVHDCAAIPRTIPVAPGMVFTVEPGVYISKDCKETRPEFRGMGIRIEDDIL 391 (413)
Q Consensus 312 iGl~~~E~p~~~~~~~~~~g~~~~~~pg~~~~~~~~~~~~~~L~~GMv~~iEPgi~~~~~~~~~~~~~~~~gvriED~vl 391 (413)
+|..+|+.|..... +. .+...+|+|||||||||+++. +|..+...+++++|+||||+
T Consensus 224 iG~~~~~~~~~~~~----------~~----------~~~~~~Le~GmV~tIEP~i~~---g~g~v~~~g~~~~~~E~tvl 280 (295)
T d1b6aa2 224 IGQYRIHAGKTVPI----------VK----------GGEATRMEEGEVYAIETFGST---GKGVVDIKGSYTAQFEHTIL 280 (295)
T ss_dssp EBTTBSCCSCEEES----------SS----------SCCCCBCCTTCEEEEEEEEES---SCSCCCSTTCCEEEEEEEEE
T ss_pred Cccccccccccccc----------cc----------CCCCCEeCCCCEEEEeCeeeC---CCeEEccCCcEEEEeceEEE
Confidence 99988887753210 01 235678999999999998874 35666666778999999999
Q ss_pred EeCCCCcccCCC
Q psy247 392 IDKSSNVENLSA 403 (413)
Q Consensus 392 Vt~~G~~e~Lt~ 403 (413)
||++|+ |+||+
T Consensus 281 Vt~~G~-EvLT~ 291 (295)
T d1b6aa2 281 LRPTCK-EVVSR 291 (295)
T ss_dssp ECSSCE-EETTC
T ss_pred ECCCcC-eECCC
Confidence 999999 99997
No 9
>d2v3za1 c.55.2.1 (A:1-176) Aminopeptidase P {Escherichia coli [TaxId: 562]}
Probab=99.58 E-value=2.1e-16 Score=139.52 Aligned_cols=63 Identities=38% Similarity=0.701 Sum_probs=55.6
Q ss_pred CCCCcceeeeecCceEEecCCCCCCEEEEEEcCCCCCceEEEEEeCcchhhhccCCCcccHhh
Q psy247 1 MTEKIPYIFRQNTDFFYFTGCLEPDSAVVIHGASDENFKSELFVKRKDAKAELWDGPRTGKAQ 63 (413)
Q Consensus 1 ~~~~~~~~f~q~~n~~YltG~~~~~~~lv~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~ 63 (413)
|++|++|+|||++||+||||+.+|+++||+...+....+.+||++++++..|+|.|++.+.++
T Consensus 35 r~~D~~y~FrQ~s~F~YLTG~~ep~~vlvl~~~~~~~~~~~Lf~~~~d~~~e~W~G~~~~~e~ 97 (176)
T d2v3za1 35 RSADSEYPYRQNSDFWYFTGFNEPEAVLVLIKSDDTHNHSVLFNRVRDLTAEIWFGRRLGQDA 97 (176)
T ss_dssp EETTEECCCCCCHHHHHHHCCCCSSCEEEEEECSSSCEEEEEEECCCCHHHHHHHCCCCHHHH
T ss_pred ccCCCCCCccccCccceecccCCCCceEEEEecCCCCcEEEEEEcCCCcccceeCCccccchh
Confidence 478999999999999999999999999998765444446899999999999999999998883
No 10
>d1b6aa2 d.127.1.1 (A:110-374,A:449-478) Methionine aminopeptidase {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.96 E-value=5.3e-08 Score=91.32 Aligned_cols=185 Identities=15% Similarity=0.155 Sum_probs=112.8
Q ss_pred HHHHHHHHHHHHcCCC-CCCCCceeecCCCcccccccc---CCcccccCcceecccccCCCCCCHHHHHhhhHHHHHhhc
Q psy247 124 ELFTKFDYEVRMRGAQ-ILAYPPVVASGDNANVIHYVH---NNQKCCHGDLLLMDAGFSKPGRTEHELFTKFDYEVRMRG 199 (413)
Q Consensus 124 el~~~~~~~~~~~G~~-~~~~~~iv~sG~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (413)
++...+.......+.. ..+|++ .++.|.+..|+.+ +++.++.||++++|.|+...++. .|+++||.+
T Consensus 90 ~~e~~~~~~g~~~~~~~~~afp~--~~~~n~~~~H~~p~~~~~~~l~~GD~v~iD~g~~~~gY~-sD~trT~~~------ 160 (295)
T d1b6aa2 90 KLEDCSRKLIKENGLNAGLAFPT--GCSLNNCAAHYTPNAGDTTVLQYDDICKIDFGTHISGRI-IDCAFTVTF------ 160 (295)
T ss_dssp HHHHHHHHHHTCBTTTEEEEEEE--EEEETTEEECCCCCTTCCCBCCTTCCEEEEEEEEETTEE-EEEEEEECS------
T ss_pred HHHHHHHHhccccCcccccCCcc--cccccceecccccccccchhccCCcceEEEeeecccccc-ccceeeeee------
Confidence 3444444444444433 345664 3445777888876 57899999999999998887753 333333211
Q ss_pred ccccCCCceeccCCCccccccccCCccccCCCEEEEecceeeCcEEeceEEEEeecCCCCHHHHHHHHHHHHHHHHHHHh
Q psy247 200 AQILAYPPVVASGDNANVIHYVHNNQKCCHGDLLLMDAGCELNGYDSDITRTWPISGQFTDHQKVLYEIVLDTQLKLLKL 279 (413)
Q Consensus 200 ~~~~~~~~~v~~g~~~~~~h~~~~~~~i~~Gd~v~iD~g~~~~GY~aDitRT~~v~G~~~~~~~~~~~~~~~a~~~~~~~ 279 (413)
|+ . . .+.-...+++++.+.++.+.++..
T Consensus 161 ------------------------------g~----------------~-----~-~~~~~~~~~~~~~a~~~~~~g~~~ 188 (295)
T d1b6aa2 161 ------------------------------NP----------------K-----Y-DTLLKAVKDATNTGIKCAGIDVRL 188 (295)
T ss_dssp ------------------------------SG----------------G-----G-HHHHHHHHHHHHHHHHHCCTTCBH
T ss_pred ------------------------------cc----------------c-----h-hHHHHHHHHHhhhhhhcccccccc
Confidence 00 0 0 111223345555555555555666
Q ss_pred cccCCCCHHHHHHHH--------HHHHcCcccccccccccCCCCccCCCCCCC--CCCCCCCcceecCCCCccccCCCCC
Q psy247 280 CEKSDSALNFIYRYA--------YVFQIGFKFCPHHSSHYLGMDVHDCAAIPR--TIPVAPGVVFTVEPGMDVHDCAAIP 349 (413)
Q Consensus 280 lkp~G~~~~ei~~~~--------~~~~~g~~~~~h~~GHgiGl~~~E~p~~~~--~~~~~~g~~~~~~pg~~~~~~~~~~ 349 (413)
..+ |..+.++.+.. +-......+..|++||.++...+..|.+.. ...|+|||+|||||+.+. +
T Consensus 189 ~~i-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gHgiG~~~~~~~~~~~~~~~~~~~~Le~GmV~tIEP~i~~------g 261 (295)
T d1b6aa2 189 CDV-GEAIQEVMESYEVEIDGKTYQVKPIRNLNGHSIGQYRIHAGKTVPIVKGGEATRMEEGEVYAIETFGST------G 261 (295)
T ss_dssp HHH-HHHHHHHHHTCEEEETTEEEECEECTTCEEEEEBTTBSCCSCEEESSSSCCCCBCCTTCEEEEEEEEES------S
T ss_pred cch-HHHHHHHHHhhhhhhhhccCcccceeccccccCcccccccccccccccCCCCCEeCCCCEEEEeCeeeC------C
Confidence 677 88888887654 122233356789999999988887776543 456899999999997642 1
Q ss_pred CC-CCCCCCcEEEeCCeeeEcCCCCCcc
Q psy247 350 RT-IPVAPGMVFTVEPGVYISKDCKETR 376 (413)
Q Consensus 350 ~~-~~L~~GMv~~iEPgi~~~~~~~~~~ 376 (413)
.. ..+.-+.+..+|-.+++.+++..++
T Consensus 262 ~g~v~~~g~~~~~~E~tvlVt~~G~EvL 289 (295)
T d1b6aa2 262 KGVVDIKGSYTAQFEHTILLRPTCKEVV 289 (295)
T ss_dssp CSCCCSTTCCEEEEEEEEEECSSCEEET
T ss_pred CeEEccCCcEEEEeceEEEECCCcCeEC
Confidence 11 1233345677888888887744433
No 11
>d1chma2 d.127.1.1 (A:157-402) Creatinase, catalytic (C-terminal) domain {Pseudomonas putida [TaxId: 303]}
Probab=97.81 E-value=2.3e-06 Score=77.34 Aligned_cols=51 Identities=20% Similarity=0.144 Sum_probs=43.0
Q ss_pred CCCCCceeecCCCccccccccCCcccccCcceecccccCCCCCCHHHHHhhh
Q psy247 140 ILAYPPVVASGDNANVIHYVHNNQKCCHGDLLLMDAGFSKPGRTEHELFTKF 191 (413)
Q Consensus 140 ~~~~~~iv~sG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (413)
...+.+++++|.+++.+|+.++++.++.||++++|.|+.+.++ ..|++|+|
T Consensus 59 ~~~~~~~~~~g~~~~~~h~~~~~~~~~~gd~v~~d~g~~~~gY-~~d~~Rt~ 109 (246)
T d1chma2 59 LMDTWTWFQSGINTDGAHNPVTTRKVNKGDILSLNCFPMIAGY-YTALERTL 109 (246)
T ss_dssp BCCCEEEEEEGGGGGSTTCCEESCBCCTTCEEEEEEECEETTE-ECCEEEEE
T ss_pred cccccccccccCccccccccCCCccccCCCEEEEeeccccccc-ccceeecc
Confidence 4578899999999999999999999999999999999888774 34555444
No 12
>d1pv9a1 c.55.2.1 (A:8-124) Aminopeptidase P {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=97.73 E-value=6e-06 Score=66.05 Aligned_cols=78 Identities=13% Similarity=0.353 Sum_probs=54.9
Q ss_pred eeeeecCceEEecCCCC-CCEEEEEEcCCCCCceEEEEEeCcchhh---hc------cC-----------CCcccH----
Q psy247 7 YIFRQNTDFFYFTGCLE-PDSAVVIHGASDENFKSELFVKRKDAKA---EL------WD-----------GPRTGK---- 61 (413)
Q Consensus 7 ~~f~q~~n~~YltG~~~-~~~~lv~~~~~~~~~~~~l~v~~~~~~~---~~------~~-----------~~~~~~---- 61 (413)
+.+.+++|++|||||.. +.++++++.+ ++++++++++... +. |. ..++|+
T Consensus 13 ~lit~~~ni~YlTGf~~~~~~~lli~~~-----~~~li~~~~~~~~a~~~~~~~~~~~~~~~~~~~~l~~~~~igiE~~l 87 (117)
T d1pv9a1 13 VFIAKPVNVYYFSGTSPLGGGYIIVDGD-----EATLYVPELEYEMAKEESKLPVVKFKKFDEIYEILKNTETLGIEGTL 87 (117)
T ss_dssp EEECCHHHHHHHHSCCCSSCCEEEEETT-----EEEEEEEGGGHHHHHHHCSSCEEEESSTTHHHHHTTTCSEEEECTTS
T ss_pred EEEeccccceeeeCcCCCcceEEEecCC-----CceEEEccchHHHHHhccCCCEEEecchhhHHHHhccCceEeEcccc
Confidence 66788899999999975 4466676653 6899999987542 11 11 122333
Q ss_pred --hhHhhhcCCCCCCcccchHHHHHHHHcc
Q psy247 62 --AQLNGYVPRRKDYSWNVPKQLFHQLRLY 89 (413)
Q Consensus 62 --~~~~~~l~~~~~~~~~d~~~~l~~~R~v 89 (413)
..+..+.+.+++++++++++++.++|+|
T Consensus 88 ~~~~~~~l~~~l~~~~~~~~~~ii~~lR~I 117 (117)
T d1pv9a1 88 SYSMVENFKEKSNVKEFKKIDDVIKDLRII 117 (117)
T ss_dssp BHHHHHHHHHTC-CCEEEECHHHHHHHHTS
T ss_pred cHHHHHHHHHhCCCCeEEEhHHHHHHcCcC
Confidence 2556666677889999999999999986
No 13
>d1qxya_ d.127.1.1 (A:) Methionine aminopeptidase {Staphylococcus aureus [TaxId: 1280]}
Probab=97.14 E-value=1.1e-05 Score=72.78 Aligned_cols=49 Identities=22% Similarity=0.273 Sum_probs=41.8
Q ss_pred CCCceeecCCCccccccccCCcccccCcceecccccCCCCCCHHHHHhhh
Q psy247 142 AYPPVVASGDNANVIHYVHNNQKCCHGDLLLMDAGFSKPGRTEHELFTKF 191 (413)
Q Consensus 142 ~~~~iv~sG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (413)
.|++++++|.|++.+|+.++++.++.||++++|.|....+++ .|++++|
T Consensus 61 ~~~~~~~~g~~~~~~h~~~~~~~l~~Gd~v~id~g~~~~gY~-~d~~Rt~ 109 (249)
T d1qxya_ 61 NFPGQTCISVNEEVAHGIPSKRVIREGDLVNIDVSALKNGYY-ADTGISF 109 (249)
T ss_dssp CCSSSSEEEETTEEECCCCCSCBCCTTCEEEEEEEEEETTEE-EEEEEEE
T ss_pred cccccccccccccccccccCCceecCCCceEEeeeeEECCEe-ccccccc
Confidence 588899999999999999999999999999999998888764 3444443
No 14
>d1chma1 c.55.2.1 (A:2-156) Creatinase {Pseudomonas putida [TaxId: 303]}
Probab=96.33 E-value=0.00058 Score=56.67 Aligned_cols=79 Identities=16% Similarity=0.194 Sum_probs=50.2
Q ss_pred Ccc-eeeeecCceEEecCCCC----CCEEEEEEcCCCCCceEEEEEeCcchhh---h-------ccC-------------
Q psy247 4 KIP-YIFRQNTDFFYFTGCLE----PDSAVVIHGASDENFKSELFVKRKDAKA---E-------LWD------------- 55 (413)
Q Consensus 4 ~~~-~~f~q~~n~~YltG~~~----~~~~lv~~~~~~~~~~~~l~v~~~~~~~---~-------~~~------------- 55 (413)
+++ ..+.+.+|++|||||.. ...+++++.++ ..+++.+.+... . .|.
T Consensus 38 giDalli~~~~ni~YlTGf~~~~~~r~~~l~i~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 112 (155)
T d1chma1 38 NIDAAIFTSYHNINYYSDFLYCSFGRPYALVVTEDD-----VISISANIDGGQPWRRTVGTDNIVYTDWQRDNYFAAIQQ 112 (155)
T ss_dssp TCSEEEECSHHHHHHHHSCCCCCTTCCCEEEECSSC-----EEEEEEGGGTTHHHHHCCSSEEEEECTTSTTHHHHHHHH
T ss_pred CCCEEEEeccccceeecCccccCccCceEEEecCCC-----ceEEecchHHHHHHHhccccccccccCCcchHHHHHHHH
Confidence 344 55677889999999852 22466777653 556676654321 1 111
Q ss_pred ----CCcccHh-------hHhhhcCCCCCCcccchHHHHHHHH
Q psy247 56 ----GPRTGKA-------QLNGYVPRRKDYSWNVPKQLFHQLR 87 (413)
Q Consensus 56 ----~~~~~~~-------~~~~~l~~~~~~~~~d~~~~l~~~R 87 (413)
..++|++ .+..+...+|+++++|+++++.++|
T Consensus 113 ~~~~~~~IGie~~~~~~~~~~~L~~~lp~~~~vd~s~~i~~lR 155 (155)
T d1chma1 113 ALPKARRIGIEHDHLNLQNRDKLAARYPDAELVDVAAACMRMR 155 (155)
T ss_dssp HCSCCSEEEECTTTCBHHHHHHHHHHCTTCEEEECHHHHHHHH
T ss_pred hcccCceEEEeccEEcHHHHHHHHHhCCCCEEEEhHHHHHhhC
Confidence 1223332 4555556678999999999999988
No 15
>d1kp0a1 c.55.2.1 (A:1-156) Creatinase {Actinobacillus sp. [TaxId: 41114]}
Probab=95.73 E-value=0.0021 Score=52.98 Aligned_cols=77 Identities=16% Similarity=0.088 Sum_probs=48.5
Q ss_pred eeeeecCceEEecCCCCC----CEEEEEEcCCCCCceEEEEEeCcchhhh---c-------c----------------CC
Q psy247 7 YIFRQNTDFFYFTGCLEP----DSAVVIHGASDENFKSELFVKRKDAKAE---L-------W----------------DG 56 (413)
Q Consensus 7 ~~f~q~~n~~YltG~~~~----~~~lv~~~~~~~~~~~~l~v~~~~~~~~---~-------~----------------~~ 56 (413)
..+.+.+|++|||||... ..+++++.+ ...+++++.+.... . + .+
T Consensus 43 llit~~~ni~YlTGf~~~~~~~~~~l~v~~~-----~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 117 (156)
T d1kp0a1 43 VLFTSYHNINYYSGWLYCYFGRKYAZVIBZV-----KAVTISKGIDGGMPWRRSFGBNIVYTDWKRDNFYSAVKKLVKGA 117 (156)
T ss_dssp EEECSHHHHHHHHSCCCCCTTCCCEEEECSS-----CEEEEEEGGGTTHHHHHCSSEEEEECSSSTTHHHHHHHHHHTTC
T ss_pred EEEcCcccCeeecCCCcCccceeEEEEcCCC-----CcEEEechhhhhhhhccccccceeeecCcchHHHHHHHHhcccc
Confidence 567788999999998632 134455432 46677777653210 0 0 11
Q ss_pred CcccH-------hhHhhhcCCCCCCcccchHHHHHHHHc
Q psy247 57 PRTGK-------AQLNGYVPRRKDYSWNVPKQLFHQLRL 88 (413)
Q Consensus 57 ~~~~~-------~~~~~~l~~~~~~~~~d~~~~l~~~R~ 88 (413)
.++|+ ..+..+.+.+|+.+++|+++++.++|+
T Consensus 118 ~~ig~E~~~~~~~~~~~L~~~l~~~~~vD~s~~i~~~RM 156 (156)
T d1kp0a1 118 KZIGIEHDHVTLBHRRZLZKALPGTEFVDVGZPVMWZRV 156 (156)
T ss_dssp SEEEECTTTCBHHHHHHHHHHSTTCEEEECHHHHHHHHT
T ss_pred ceeeeecceEcHHHHHHHHHhCCCCEEEEhhHHHHHhhC
Confidence 22222 245555566788999999999999996
No 16
>d1xgsa2 d.127.1.1 (A:1-194,A:272-295) Methionine aminopeptidase {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=94.63 E-value=0.088 Score=45.20 Aligned_cols=96 Identities=16% Similarity=0.097 Sum_probs=65.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHH--HHHHcCcc-cccccccccCCCC-ccCCCCCCCCCCCCCCccee
Q psy247 260 DHQKVLYEIVLDTQLKLLKLCEKSDSALNFIYRYA--YVFQIGFK-FCPHHSSHYLGMD-VHDCAAIPRTIPVAPGVVFT 335 (413)
Q Consensus 260 ~~~~~~~~~~~~a~~~~~~~lkp~G~~~~ei~~~~--~~~~~g~~-~~~h~~GHgiGl~-~~E~p~~~~~~~~~~g~~~~ 335 (413)
+..|++.+.+.++.+++++.+|| |++-.||.+.+ .+.+.|.. .++-.+ +.|-. .|-.|.
T Consensus 4 e~~r~A~~ia~~~~~~~~~~i~p-G~te~el~~~~~~~~~~~G~~~~~~~~~--~~~~~~~~~~~~-------------- 66 (218)
T d1xgsa2 4 EKLMKAGEIAKKVREKAIKLARP-GMLLLELAESIEKMIMELGGKPAFPVNL--SINEIAAHYTPY-------------- 66 (218)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCT-TCBHHHHHHHHHHHHHHTTCEESSCCEE--EETTEEECCCCC--------------
T ss_pred HHHHHHHHHHHHHHHHHHHHCcC-CCCHHHHHHHHHHHHHHhhcccccceee--cccccccccccc--------------
Confidence 45789999999999999999999 99999998887 55566642 121111 11111 111111
Q ss_pred cCCCCccccCCCCCCCCCCCCCcEEEeCCeeeEcCCCCCcccccccceEEEceeEEEeCC
Q psy247 336 VEPGMDVHDCAAIPRTIPVAPGMVFTVEPGVYISKDCKETRPEFRGMGIRIEDDILIDKS 395 (413)
Q Consensus 336 ~~pg~~~~~~~~~~~~~~L~~GMv~~iEPgi~~~~~~~~~~~~~~~~gvriED~vlVt~~ 395 (413)
..++++|++|..+.++.+....+ +..-+.-|+.+++.
T Consensus 67 ------------~~~~r~l~~Gd~v~iD~g~~~~g-----------Y~aD~~Rt~~~~~~ 103 (218)
T d1xgsa2 67 ------------KGDTTVLKEGDYLKIDVGVHIDG-----------FIADTAVTVRVGME 103 (218)
T ss_dssp ------------TTCCCBCCTTCEEEEEEEEEETT-----------EEEEEEEEEETTSC
T ss_pred ------------cCCCeeeecCCeeEeeecccccc-----------ccccccceEeechh
Confidence 34578999999999998775443 66667777776543
No 17
>d2v3za2 d.127.1.1 (A:177-440) Aminopeptidase P, C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=93.14 E-value=0.15 Score=44.81 Aligned_cols=92 Identities=9% Similarity=0.011 Sum_probs=60.4
Q ss_pred HHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHH--HHHHcCccc--ccccccccCCCCccCCCCCCCCCCCCCCcceec
Q psy247 261 HQKVLYEIVLDTQLKLLKLCEKSDSALNFIYRYA--YVFQIGFKF--CPHHSSHYLGMDVHDCAAIPRTIPVAPGVVFTV 336 (413)
Q Consensus 261 ~~~~~~~~~~~a~~~~~~~lkp~G~~~~ei~~~~--~~~~~g~~~--~~h~~GHgiGl~~~E~p~~~~~~~~~~g~~~~~ 336 (413)
..|++.+.+.++..++.+.++| |++-.||.+.+ .+.+.|..+ ++..++ .|-...-...
T Consensus 7 ~~r~A~~i~~~~~~~~~~~i~~-G~te~ei~~~~~~~~~~~G~~~~~~~~~~~--~g~~~~~~h~--------------- 68 (264)
T d2v3za2 7 VLRRAGEITAMAHTRAMEKCRP-GMFEYHLEGEIHHEFNRHGARYPSYNTIVG--SGENGCILHY--------------- 68 (264)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCT-TCBHHHHHHHHHHHHHHTTCCEESSCCEEE--EGGGGGSTTC---------------
T ss_pred HHHHHHHHHHHHHHHHHHHccC-CCCHHHHHHHHHHHHHHcCCCCcccccccc--CCCCcccccc---------------
Confidence 3577888888999999999999 99999999887 555666432 111111 1111111101
Q ss_pred CCCCccccCCCCCCCCCCCCCcEEEeCCeeeEcCCCCCcccccccceEEEceeEEE
Q psy247 337 EPGMDVHDCAAIPRTIPVAPGMVFTVEPGVYISKDCKETRPEFRGMGIRIEDDILI 392 (413)
Q Consensus 337 ~pg~~~~~~~~~~~~~~L~~GMv~~iEPgi~~~~~~~~~~~~~~~~gvriED~vlV 392 (413)
...+.+|++|.++.++.+....+ +-.-+.-|+.|
T Consensus 69 -----------~~~~~~l~~gd~v~vd~g~~~~g-----------Y~~d~~Rt~~v 102 (264)
T d2v3za2 69 -----------TENECEMRDGDLVLIDAGCEYKG-----------YAGDITRTFPV 102 (264)
T ss_dssp -----------CCCCSBCCTTCEEEEEECEEETT-----------EECCEEEEEET
T ss_pred -----------ccCccccccccceeEEeeeccCC-----------eeccceEEEEE
Confidence 23578999999999998876543 44455666665
No 18
>d1pv9a2 d.127.1.1 (A:125-345) Aminopeptidase P, C-terminal domain {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=91.85 E-value=0.3 Score=41.56 Aligned_cols=95 Identities=8% Similarity=0.023 Sum_probs=59.1
Q ss_pred HHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHH--HHHHcCcccccccccccCCCCccCCCCCCCCCCCCCCcceecCCC
Q psy247 262 QKVLYEIVLDTQLKLLKLCEKSDSALNFIYRYA--YVFQIGFKFCPHHSSHYLGMDVHDCAAIPRTIPVAPGVVFTVEPG 339 (413)
Q Consensus 262 ~~~~~~~~~~a~~~~~~~lkp~G~~~~ei~~~~--~~~~~g~~~~~h~~GHgiGl~~~E~p~~~~~~~~~~g~~~~~~pg 339 (413)
.|++.+.+.++..++++.++| |++-.||...+ .+.+.|........--..|-...-...
T Consensus 9 mr~a~~i~~~~~~~~~~~i~~-G~tE~ei~~~~~~~~~~~G~~~~~~~~~v~~g~~~~~~h~------------------ 69 (221)
T d1pv9a2 9 IEKACEIADKAVMAAIEEITE-GKREREVAAKVEYLMKMNGAEKPAFDTIIASGHRSALPHG------------------ 69 (221)
T ss_dssp HHHHHHHHHHHHHHHHHHCCT-TCBHHHHHHHHHHHHHHTTCSEESSCCEEEEGGGGGSTTC------------------
T ss_pred HHHHHHHHHHHHHHHHHHccC-CCcHHHHHHHHHHHHHhccccccccccccccccccccccc------------------
Confidence 467778888888899999999 99999998877 555666422111111111211100000
Q ss_pred CccccCCCCCCCCCCCCCcEEEeCCeeeEcCCCCCcccccccceEEEceeEEEeC
Q psy247 340 MDVHDCAAIPRTIPVAPGMVFTVEPGVYISKDCKETRPEFRGMGIRIEDDILIDK 394 (413)
Q Consensus 340 ~~~~~~~~~~~~~~L~~GMv~~iEPgi~~~~~~~~~~~~~~~~gvriED~vlVt~ 394 (413)
...+.++++|..+.++.+....+ +-.-+.-|+.|++
T Consensus 70 --------~~~~~~i~~gd~v~id~~~~~~g-----------y~~d~~Rt~~vG~ 105 (221)
T d1pv9a2 70 --------VASDKRIERGDLVVIDLGALYNH-----------YNSDITRTIVVGS 105 (221)
T ss_dssp --------BCCSCBCCTTCEEEEEECEEETT-----------EECCEEEEEESSS
T ss_pred --------ccccccccccceEEEecccccCc-----------cccCcceeeecCC
Confidence 23577999999999987765433 4445667777743
No 19
>d2gg2a1 d.127.1.1 (A:3-264) Methionine aminopeptidase {Escherichia coli [TaxId: 562]}
Probab=89.90 E-value=1.4 Score=38.20 Aligned_cols=42 Identities=24% Similarity=0.317 Sum_probs=34.9
Q ss_pred HHHHHHHHHHHHHHHHhccCCCCCHHHHHHHHHHHHHHcCCC
Q psy247 98 MRETCRIASEGFKETIGFSKPGRTEHELFTKFDYEVRMRGAQ 139 (413)
Q Consensus 98 ~r~A~~i~~~~~~~~~~~~~~G~tE~el~~~~~~~~~~~G~~ 139 (413)
++++...+.++++.+++.++||++-.|+.+.+...+.+.|..
T Consensus 120 ~~~~~~~~~~a~~~~~~~ikpG~~~~dv~~a~~~~~~~~g~~ 161 (262)
T d2gg2a1 120 GERLCRITQESLYLALRMVKPGINLREIGAAIQKFVEAEGFS 161 (262)
T ss_dssp HHHHHHHHHHHHHHHHHHCSTTCBHHHHHHHHHHHHHHTTCE
T ss_pred chhHHHHHHHHHHHHHHhhCCCCcHHHHHHHHHHHHHHcCCC
Confidence 344556667788899999999999999999999999888753
No 20
>d1o0xa_ d.127.1.1 (A:) Methionine aminopeptidase {Thermotoga maritima [TaxId: 2336]}
Probab=81.42 E-value=3.6 Score=34.80 Aligned_cols=98 Identities=9% Similarity=-0.037 Sum_probs=57.4
Q ss_pred HHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHH--HHHHcCccccccc---ccccCCCCccCCCCCCCCCCCCCCcceec
Q psy247 262 QKVLYEIVLDTQLKLLKLCEKSDSALNFIYRYA--YVFQIGFKFCPHH---SSHYLGMDVHDCAAIPRTIPVAPGVVFTV 336 (413)
Q Consensus 262 ~~~~~~~~~~a~~~~~~~lkp~G~~~~ei~~~~--~~~~~g~~~~~h~---~GHgiGl~~~E~p~~~~~~~~~~g~~~~~ 336 (413)
.|++.+.+.++.+++.+.++| |++..+|...+ .+.+.|......+ ....+.......+.
T Consensus 13 mr~A~~ia~~~~~~~~~~i~~-G~te~ev~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~--------------- 76 (249)
T d1o0xa_ 13 MKKAGKAVAVALREVRKVIVP-GKTAWDVETLVLEIFKKLRVKPAFKGYGGYKYATCVSVNEEVV--------------- 76 (249)
T ss_dssp HHHHHHHHHHHHHHGGGGCST-TCBHHHHHHHHHHHHHHHTCEESSTTGGGCCCSEEEEETTBCS---------------
T ss_pred HHHHHHHHHHHHHHHHHHCcC-CCCHHHHHHHHHHHHHHhhhhhhccccccccccccccCccccc---------------
Confidence 366667777788888899999 99999998776 4455554221111 11111111111110
Q ss_pred CCCCccccCCCCCCCCCCCCCcEEEeCCeeeEcCCCCCcccccccceEEEceeEEEeC
Q psy247 337 EPGMDVHDCAAIPRTIPVAPGMVFTVEPGVYISKDCKETRPEFRGMGIRIEDDILIDK 394 (413)
Q Consensus 337 ~pg~~~~~~~~~~~~~~L~~GMv~~iEPgi~~~~~~~~~~~~~~~~gvriED~vlVt~ 394 (413)
++ ....+.++++|.++.++.+....+ +-.-+.-|+.+.+
T Consensus 77 -~~-------~~~~~~~~~~gd~v~id~g~~~~g-----------y~~D~~RT~~~G~ 115 (249)
T d1o0xa_ 77 -HG-------LPLKEKVFKEGDIVSVDVGAVYQG-----------LYGDAAVTYIVGE 115 (249)
T ss_dssp -CC-------CCCTTCBCCTTCEEEEEEEEEETT-----------EEEEEEEEEESSC
T ss_pred -ce-------eeccccccccccceeeecceeecc-----------eecccccceeecC
Confidence 00 023567889999999997776543 4555666776643
No 21
>d1l1pa_ d.26.1.1 (A:) Trigger factor PPIase domain {Escherichia coli [TaxId: 562]}
Probab=28.82 E-value=11 Score=27.81 Aligned_cols=35 Identities=9% Similarity=0.119 Sum_probs=24.9
Q ss_pred cccCCccccCCCEEEEecceeeCcEE----eceEEEEee
Q psy247 220 YVHNNQKCCHGDLLLMDAGCELNGYD----SDITRTWPI 254 (413)
Q Consensus 220 ~~~~~~~i~~Gd~v~iD~g~~~~GY~----aDitRT~~v 254 (413)
+.+.+|+++.||.|.||+-+..+|=. ..-.+++.+
T Consensus 8 ~~~~dr~a~~GD~v~id~~~~~dG~~~~~~~~~~~~~~l 46 (106)
T d1l1pa_ 8 WKEKDGAVEAEDRVTIDFTGSVDGEEFEGGKASDFVLAM 46 (106)
T ss_dssp CCCCSSSCCTTEEEEEEEECCSSSSCCSTTEEEEEEEEE
T ss_pred cccCcccccCCCEEEEEEEEEECCEECCCCcccceEEEe
Confidence 44568999999999999988776622 223455555
No 22
>d1t11a3 d.26.1.1 (A:135-247) Trigger factor PPIase domain {Vibrio cholerae [TaxId: 666]}
Probab=24.22 E-value=17 Score=26.83 Aligned_cols=24 Identities=13% Similarity=0.263 Sum_probs=18.8
Q ss_pred cccCCccccCCCEEEEecceeeCc
Q psy247 220 YVHNNQKCCHGDLLLMDAGCELNG 243 (413)
Q Consensus 220 ~~~~~~~i~~Gd~v~iD~g~~~~G 243 (413)
+.+.+++.+.||.|.+|+-+..+|
T Consensus 17 ~~~v~r~a~~gD~v~id~~~~~dG 40 (113)
T d1t11a3 17 WKEVDEAAENGKRVSIDFVGSIDG 40 (113)
T ss_dssp EEECSCCCCTTCEEEEEEEEESSS
T ss_pred ccCCcccccCCCEEEEEEEEEECC
Confidence 345578899999999998776655
Done!