BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy2470
(858 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q7YR39|DHX16_PANTR Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
OS=Pan troglodytes GN=DHX16 PE=3 SV=1
Length = 1044
Score = 233 bits (595), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 158/510 (30%), Positives = 264/510 (51%), Gaps = 75/510 (14%)
Query: 348 RTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYYSNDPVVNYVQGVVD 407
R +LK++++SAT+D F++ +A + + G +PV ++Y+ P +Y++ V
Sbjct: 546 RPELKVLVASATMDTARFSTFFD-----DAPVFRIPGRRFPVDIFYTKAPEADYLEACVV 600
Query: 408 TAIKIHESMPVGDILAFVIGLEQIEHIIGILKQYHNQ--REDLKLLILPMHGSLPNNEQI 465
+ ++IH + P GDIL F+ G E+IE +L+ + + +LL+LP++ +LP++ Q
Sbjct: 601 SVLQIHVTQPPGDILVFLTGQEEIEAACEMLQDRCRRLGSKIRELLVLPIYANLPSDMQA 660
Query: 466 KVFRPTPRAMRKIVIATNIAETSITIPGIVYVIDPGFVKARWFNPNTLTNSLVVVPISKA 525
++F+PTP RK+V+ATNIAETS+TI GI+YV+DPGF K + +NP T SL V P SKA
Sbjct: 661 RIFQPTPPGARKVVVATNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSKA 720
Query: 526 SAVQRAGRAGRVRSGHVYRKNFMYNRLFIHFCVSRNIP--TIPNDPKDVKCDVMFHKVFF 583
SA QRAGRAGRV +G + RL+ + + T+P + +V+
Sbjct: 721 SANQRAGRAGRVAAGKCF-------RLYTAWAYQHELEETTVPEIQRTSLGNVVL----- 768
Query: 584 SFFQYLLEAGWCYDTKLIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTED 643
LL++ +D +P LA E+L + +G + TT
Sbjct: 769 -----LLKSLGIHDLMHFDFLDPPPYETLLLA---LEQL-----YALGALNHLGELTTS- 814
Query: 644 VTKIKYMTEGILMREMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKILKDKERDFEC 703
G M E+ DP+L K +I+ E + C
Sbjct: 815 ---------GRKMAELPVDPMLSK--MILASE------------------------KYSC 839
Query: 704 SDEIASILSLLQVQD-IFIKPSSGALSLKARVLRRNFEVEQGDLLTLLNIFKFYEKQENK 762
S+EI ++ ++L V + IF +P + A R NF + GD L LLN++ + +
Sbjct: 840 SEEILTVAAMLSVNNSIFYRPKDKVVH--ADNARVNFFLPGGDHLVLLNVYTQWAESGYS 897
Query: 763 KQFCHKYFFNYKVLKRAAELKNQMILLLKKSSIPLVTSPRNTNAVLKCLTNGFFSNAAYL 822
Q+C++ F ++ ++RA +++ Q+ LL++ + L + + V K +T G+F + A L
Sbjct: 898 SQWCYENFVQFRSMRRARDVREQLEGLLERVEVGLSSCQGDYIRVRKAITAGYFYHTARL 957
Query: 823 HYSGVYRTVRGNEDLYIHPSSVLYTLQQPQ 852
SG YRTV+ + ++IHP+S L+ QQP+
Sbjct: 958 TRSG-YRTVKQQQTVFIHPNSSLFE-QQPR 985
Score = 119 bits (297), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 54/109 (49%), Positives = 79/109 (72%), Gaps = 1/109 (0%)
Query: 587 QYLLEAGWCYDTKLIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTK 646
QYL E G+ I T+PRR++ S+A RV+ E+ LG+ VGY+IRF+DCT+E T
Sbjct: 437 QYLFEEGYTNKGMKIACTQPRRVAAMSVAARVAREMGVKLGNEVGYSIRFEDCTSER-TV 495
Query: 647 IKYMTEGILMREMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKILK 695
++YMT+G+L+RE +++P L YSV+M+DE HERT+ TDIL GL+K + +
Sbjct: 496 LRYMTDGMLLREFLSEPDLASYSVVMVDEAHERTLHTDILFGLIKDVAR 544
Score = 89.7 bits (221), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 47/97 (48%), Positives = 68/97 (70%), Gaps = 2/97 (2%)
Query: 46 RLYTEASFS-QLNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRVALEL 104
RLYT ++ +L E T PE+QRT L + VL LK+LGIH+++ F F PPP + L +ALE
Sbjct: 739 RLYTAWAYQHELEETTVPEIQRTSLGNVVLLLKSLGIHDLMHFDFLDPPPYETLLLALEQ 798
Query: 105 LYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLLSS 141
LY+LGA++ G LT G MAE+P+ P+ +K++L+S
Sbjct: 799 LYALGALNHLGELTTS-GRKMAELPVDPMLSKMILAS 834
Score = 43.9 bits (102), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 31/50 (62%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILMECSRKFSRLYTE 50
MT+G+L+ +P + YSV+M+D+ HERT+ TDIL + +R E
Sbjct: 499 MTDGMLLREFLSEPDLASYSVVMVDEAHERTLHTDILFGLIKDVARFRPE 548
>sp|O60231|DHX16_HUMAN Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
OS=Homo sapiens GN=DHX16 PE=1 SV=2
Length = 1041
Score = 233 bits (595), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 158/510 (30%), Positives = 264/510 (51%), Gaps = 75/510 (14%)
Query: 348 RTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYYSNDPVVNYVQGVVD 407
R +LK++++SAT+D F++ +A + + G +PV ++Y+ P +Y++ V
Sbjct: 543 RPELKVLVASATMDTARFSTFFD-----DAPVFRIPGRRFPVDIFYTKAPEADYLEACVV 597
Query: 408 TAIKIHESMPVGDILAFVIGLEQIEHIIGILKQYHNQ--REDLKLLILPMHGSLPNNEQI 465
+ ++IH + P GDIL F+ G E+IE +L+ + + +LL+LP++ +LP++ Q
Sbjct: 598 SVLQIHVTQPPGDILVFLTGQEEIEAACEMLQDRCRRLGSKIRELLVLPIYANLPSDMQA 657
Query: 466 KVFRPTPRAMRKIVIATNIAETSITIPGIVYVIDPGFVKARWFNPNTLTNSLVVVPISKA 525
++F+PTP RK+V+ATNIAETS+TI GI+YV+DPGF K + +NP T SL V P SKA
Sbjct: 658 RIFQPTPPGARKVVVATNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSKA 717
Query: 526 SAVQRAGRAGRVRSGHVYRKNFMYNRLFIHFCVSRNIP--TIPNDPKDVKCDVMFHKVFF 583
SA QRAGRAGRV +G + RL+ + + T+P + +V+
Sbjct: 718 SANQRAGRAGRVAAGKCF-------RLYTAWAYQHELEETTVPEIQRTSLGNVVL----- 765
Query: 584 SFFQYLLEAGWCYDTKLIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTED 643
LL++ +D +P LA E+L + +G + TT
Sbjct: 766 -----LLKSLGIHDLMHFDFLDPPPYETLLLA---LEQL-----YALGALNHLGELTTS- 811
Query: 644 VTKIKYMTEGILMREMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKILKDKERDFEC 703
G M E+ DP+L K +I+ E + C
Sbjct: 812 ---------GRKMAELPVDPMLSK--MILASE------------------------KYSC 836
Query: 704 SDEIASILSLLQVQD-IFIKPSSGALSLKARVLRRNFEVEQGDLLTLLNIFKFYEKQENK 762
S+EI ++ ++L V + IF +P + A R NF + GD L LLN++ + +
Sbjct: 837 SEEILTVAAMLSVNNSIFYRPKDKVVH--ADNARVNFFLPGGDHLVLLNVYTQWAESGYS 894
Query: 763 KQFCHKYFFNYKVLKRAAELKNQMILLLKKSSIPLVTSPRNTNAVLKCLTNGFFSNAAYL 822
Q+C++ F ++ ++RA +++ Q+ LL++ + L + + V K +T G+F + A L
Sbjct: 895 SQWCYENFVQFRSMRRARDVREQLEGLLERVEVGLSSCQGDYIRVRKAITAGYFYHTARL 954
Query: 823 HYSGVYRTVRGNEDLYIHPSSVLYTLQQPQ 852
SG YRTV+ + ++IHP+S L+ QQP+
Sbjct: 955 TRSG-YRTVKQQQTVFIHPNSSLFE-QQPR 982
Score = 119 bits (297), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 54/109 (49%), Positives = 79/109 (72%), Gaps = 1/109 (0%)
Query: 587 QYLLEAGWCYDTKLIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTK 646
QYL E G+ I T+PRR++ S+A RV+ E+ LG+ VGY+IRF+DCT+E T
Sbjct: 434 QYLFEEGYTNKGMKIACTQPRRVAAMSVAARVAREMGVKLGNEVGYSIRFEDCTSER-TV 492
Query: 647 IKYMTEGILMREMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKILK 695
++YMT+G+L+RE +++P L YSV+M+DE HERT+ TDIL GL+K + +
Sbjct: 493 LRYMTDGMLLREFLSEPDLASYSVVMVDEAHERTLHTDILFGLIKDVAR 541
Score = 89.7 bits (221), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 47/97 (48%), Positives = 68/97 (70%), Gaps = 2/97 (2%)
Query: 46 RLYTEASFS-QLNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRVALEL 104
RLYT ++ +L E T PE+QRT L + VL LK+LGIH+++ F F PPP + L +ALE
Sbjct: 736 RLYTAWAYQHELEETTVPEIQRTSLGNVVLLLKSLGIHDLMHFDFLDPPPYETLLLALEQ 795
Query: 105 LYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLLSS 141
LY+LGA++ G LT G MAE+P+ P+ +K++L+S
Sbjct: 796 LYALGALNHLGELTTS-GRKMAELPVDPMLSKMILAS 831
Score = 43.9 bits (102), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 31/50 (62%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILMECSRKFSRLYTE 50
MT+G+L+ +P + YSV+M+D+ HERT+ TDIL + +R E
Sbjct: 496 MTDGMLLREFLSEPDLASYSVVMVDEAHERTLHTDILFGLIKDVARFRPE 545
>sp|Q17IN5|MED18_AEDAE Mediator of RNA polymerase II transcription subunit 18 OS=Aedes
aegypti GN=MED18 PE=3 SV=1
Length = 215
Score = 232 bits (592), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 121/209 (57%), Positives = 147/209 (70%), Gaps = 38/209 (18%)
Query: 139 LSSGSVLDSAVEILLHRLRGLCDNVDSGPETFHDHEMCFSIR-GNQTQPLLLRVRRALDF 197
L GS+LDSA E LLHRLRGLCDNVD+GPE F D+EMC S++ N+ P++
Sbjct: 29 LLQGSILDSAAEHLLHRLRGLCDNVDTGPEAFADYEMCLSLKVPNEKTPVMT-------- 80
Query: 198 PDMPYQLRYIGQPEMGPLLLRVRRALDFPDMPYQLRYIGQPEMGVGDKARPTIVRSSIDV 257
+RVR+A D D PYQLRYIGQPE+G D+ RPT+VRSS+D+
Sbjct: 81 -------------------VRVRKAQD-TDAPYQLRYIGQPELG--DRNRPTLVRSSLDI 118
Query: 258 ACSCTVVEFLTEMGCRMDFEYISRGYMFRKGRMKILVSKIFKMSQGKPSDSGVEPISQSY 317
AC+ VV+FLTEMG R+DFEYI++GYMFRKGRMK+ VSKIFK++ EPISQSY
Sbjct: 119 ACTPHVVDFLTEMGFRVDFEYITKGYMFRKGRMKVTVSKIFKVNSS-------EPISQSY 171
Query: 318 LVELSILAPGGQDVIGEDMKAFAEQLKPL 346
LVELS+LAP GQDVI +DM+ FAEQLKPL
Sbjct: 172 LVELSVLAPTGQDVIADDMRIFAEQLKPL 200
>sp|Q767K6|DHX16_PIG Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
OS=Sus scrofa GN=DHX16 PE=3 SV=1
Length = 1045
Score = 232 bits (591), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 157/510 (30%), Positives = 264/510 (51%), Gaps = 75/510 (14%)
Query: 348 RTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYYSNDPVVNYVQGVVD 407
R +LK++++SAT+D F++ +A + + G +PV ++Y+ P +Y++ V
Sbjct: 547 RPELKVLVASATLDTARFSTFFD-----DAPVFRIPGRRFPVDIFYTKAPEADYLEACVV 601
Query: 408 TAIKIHESMPVGDILAFVIGLEQIEHIIGILKQYHNQ--REDLKLLILPMHGSLPNNEQI 465
+ ++IH + P GDIL F+ G E+IE +L+ + + +LL+LP++ +LP++ Q
Sbjct: 602 SVLQIHVTQPPGDILVFLTGQEEIEAACEMLQDRCRRLGSKIRELLVLPIYANLPSDMQA 661
Query: 466 KVFRPTPRAMRKIVIATNIAETSITIPGIVYVIDPGFVKARWFNPNTLTNSLVVVPISKA 525
++F+PTP RK+V+ATNIAETS+TI GI+YV+DPGF K + +NP T SL V P SKA
Sbjct: 662 RIFQPTPPGARKVVVATNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSKA 721
Query: 526 SAVQRAGRAGRVRSGHVYRKNFMYNRLFIHFCVSRNIP--TIPNDPKDVKCDVMFHKVFF 583
SA QRAGRAGRV +G + RL+ + + T+P + +V+
Sbjct: 722 SANQRAGRAGRVAAGKCF-------RLYTAWAYQHELEETTVPEIQRTSLGNVVL----- 769
Query: 584 SFFQYLLEAGWCYDTKLIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTED 643
LL++ +D +P LA E+L + +G + TT
Sbjct: 770 -----LLKSLGIHDLMHFDFLDPPPYETLLLA---LEQL-----YALGALNHLGELTTS- 815
Query: 644 VTKIKYMTEGILMREMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKILKDKERDFEC 703
G M E+ DP+L K +I+ E + C
Sbjct: 816 ---------GRKMAELPVDPMLSK--MILASE------------------------KYSC 840
Query: 704 SDEIASILSLLQVQD-IFIKPSSGALSLKARVLRRNFEVEQGDLLTLLNIFKFYEKQENK 762
S+EI ++ ++L V + IF +P + A R NF + GD L LLN++ + +
Sbjct: 841 SEEILTVAAMLSVNNSIFYRPKDKVVH--ADNARVNFFLPGGDHLVLLNVYTQWAESGYS 898
Query: 763 KQFCHKYFFNYKVLKRAAELKNQMILLLKKSSIPLVTSPRNTNAVLKCLTNGFFSNAAYL 822
Q+C++ F ++ ++RA +++ Q+ LL++ + L + + V K +T G+F + A L
Sbjct: 899 SQWCYENFVQFRSMRRARDVREQLEGLLERVEVGLSSCQGDYIRVRKAITAGYFYHTARL 958
Query: 823 HYSGVYRTVRGNEDLYIHPSSVLYTLQQPQ 852
SG YRTV+ + ++IHP+S L+ +QP+
Sbjct: 959 TRSG-YRTVKQQQTVFIHPNSSLFE-EQPR 986
Score = 119 bits (298), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 54/109 (49%), Positives = 79/109 (72%), Gaps = 1/109 (0%)
Query: 587 QYLLEAGWCYDTKLIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTK 646
QYL E G+ I T+PRR++ S+A RV+ E+ LG+ VGY+IRF+DCT+E T
Sbjct: 438 QYLFEEGYTQKGMKIACTQPRRVAAMSVAARVAREMGVKLGNEVGYSIRFEDCTSER-TV 496
Query: 647 IKYMTEGILMREMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKILK 695
++YMT+G+L+RE +++P L YSV+M+DE HERT+ TDIL GL+K + +
Sbjct: 497 LRYMTDGMLLREFLSEPDLASYSVVMVDEAHERTLHTDILFGLIKDVAR 545
Score = 89.7 bits (221), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 47/97 (48%), Positives = 68/97 (70%), Gaps = 2/97 (2%)
Query: 46 RLYTEASFS-QLNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRVALEL 104
RLYT ++ +L E T PE+QRT L + VL LK+LGIH+++ F F PPP + L +ALE
Sbjct: 740 RLYTAWAYQHELEETTVPEIQRTSLGNVVLLLKSLGIHDLMHFDFLDPPPYETLLLALEQ 799
Query: 105 LYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLLSS 141
LY+LGA++ G LT G MAE+P+ P+ +K++L+S
Sbjct: 800 LYALGALNHLGELTTS-GRKMAELPVDPMLSKMILAS 835
Score = 43.9 bits (102), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 31/50 (62%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILMECSRKFSRLYTE 50
MT+G+L+ +P + YSV+M+D+ HERT+ TDIL + +R E
Sbjct: 500 MTDGMLLREFLSEPDLASYSVVMVDEAHERTLHTDILFGLIKDVARFRPE 549
>sp|P34498|MOG1_CAEEL Probable pre-mRNA-splicing factor ATP-dependent RNA helicase mog-1
OS=Caenorhabditis elegans GN=mog-1 PE=1 SV=2
Length = 1131
Score = 225 bits (574), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 150/506 (29%), Positives = 239/506 (47%), Gaps = 72/506 (14%)
Query: 347 KRTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYYSNDPVVNYVQGVV 406
KR LKLI++SAT+DA++ F+ N ++ G +PV ++++ PV +YV V
Sbjct: 583 KRADLKLIVTSATMDADKFADFFG----GNCPTFTIPGRTFPVELFHARTPVEDYVDAAV 638
Query: 407 DTAIKIHESMPVGDILAFVIGLEQIEHIIGILKQYHNQREDLK-LLILPMHGSLPNNEQI 465
A+ IH GDIL F+ G E IE ++K+ + ++ L +LP++ LP++ Q
Sbjct: 639 KQAVTIHLGGMDGDILIFMPGQEDIECTCEMIKEKLGELDEAPPLAVLPIYSQLPSDLQA 698
Query: 466 KVFRPTPRAMRKIVIATNIAETSITIPGIVYVIDPGFVKARWFNPNTLTNSLVVVPISKA 525
K+F+ P MRK ++ATNIAETS+T+ GI++VIDPGF K + +NP ++L + P+S+A
Sbjct: 699 KIFQRAPGGMRKAIVATNIAETSLTVDGILFVIDPGFCKMKVYNPRIGMDALSIFPVSQA 758
Query: 526 SAVQRAGRAGRVRSGHVYRKNFMYNRLFIHFCVSRNIPTIPNDPKDVKCDVMFHKVFFSF 585
SA QR GRAGR G YR R F + +P I
Sbjct: 759 SANQRTGRAGRTGPGQCYR--LYTERQFKDELLKSTVPEIQR------------------ 798
Query: 586 FQYLLEAGWCYDTKLIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTED-- 643
T+LAN V L +LG F D +D
Sbjct: 799 --------------------------TNLANVVL--LLKSLGVDDLLKFHFMDAPPQDNM 830
Query: 644 -VTKIKYMTEGILMREMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKILKDKERDFE 702
+ + T G L P+ RK LD + + MG
Sbjct: 831 LNSMYQLWTLGALDNTGQLTPMGRKMVEFPLDPTLSKMLIMSAEMG-------------- 876
Query: 703 CSDEIASILSLLQVQDIFIKPSSGALSLKARVLRRNFEVEQGDLLTLLNIFKFYEKQENK 762
CSDE+ +I+S+L V IF +P A+ + F+V + D LT LN++ + +
Sbjct: 877 CSDEVLTIVSMLSVPAIFFRPKGREEEADAK--KEKFQVPESDHLTFLNVYIQWRTHKYS 934
Query: 763 KQFCHKYFFNYKVLKRAAELKNQMILLLKKSSIPLVTSPRNTNAVLKCLTNGFFSNAAYL 822
++C + + K LK+ E++ Q+ +++ +PL+++ + V KC+ + +F NAA L
Sbjct: 935 AKWCADNYLHVKALKKVREVRAQLKEIMQDLKLPLISNGSEWDIVRKCICSAYFHNAARL 994
Query: 823 HYSGVYRTVRGNEDLYIHPSSVLYTL 848
G Y VR ++HP+S L+ +
Sbjct: 995 KGIGEYVNVRTGIPCFLHPTSALFGM 1020
Score = 121 bits (303), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 58/108 (53%), Positives = 82/108 (75%), Gaps = 2/108 (1%)
Query: 587 QYLLEAGWCYDTKLIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTK 646
QYLLE G+ D+ LIG T+PRR++ S+A RV++E+ LG VGY IRF+DCT+E T
Sbjct: 476 QYLLEDGFG-DSGLIGCTQPRRVAAMSVARRVADEMGVDLGQDVGYAIRFEDCTSEK-TI 533
Query: 647 IKYMTEGILMREMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKIL 694
IKYMT+GIL+RE + D L +YS I++DE HER++ TD+L GLL++++
Sbjct: 534 IKYMTDGILLRECLGDGSLDQYSAIIMDEAHERSLNTDVLFGLLREVI 581
Score = 85.5 bits (210), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/137 (37%), Positives = 77/137 (56%), Gaps = 12/137 (8%)
Query: 46 RLYTEASF-SQLNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRVALEL 104
RLYTE F +L + T PE+QRT L++ VL LK+LG+ ++L+F F PP N+ ++
Sbjct: 777 RLYTERQFKDELLKSTVPEIQRTNLANVVLLLKSLGVDDLLKFHFMDAPPQDNMLNSMYQ 836
Query: 105 LYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLLSSGSVLDS----------AVEILLH 154
L++LGA+D G LT P+G M E PL P +K+L+ S + S +V +
Sbjct: 837 LWTLGALDNTGQLT-PMGRKMVEFPLDPTLSKMLIMSAEMGCSDEVLTIVSMLSVPAIFF 895
Query: 155 RLRGLCDNVDSGPETFH 171
R +G + D+ E F
Sbjct: 896 RPKGREEEADAKKEKFQ 912
Score = 40.0 bits (92), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 28/37 (75%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDIL 37
MT+GIL+ D S+++YS I++D+ HER++ TD+L
Sbjct: 537 MTDGILLRECLGDGSLDQYSAIIMDEAHERSLNTDVL 573
>sp|Q54F05|DHX8_DICDI ATP-dependent RNA helicase dhx8 OS=Dictyostelium discoideum GN=dhx8
PE=3 SV=1
Length = 1160
Score = 223 bits (567), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 158/519 (30%), Positives = 254/519 (48%), Gaps = 100/519 (19%)
Query: 347 KRTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYYSNDPVVNYVQGVV 406
+R +LK++I+SAT++AE+ +++ NA + + G +PV + Y+ DP +Y+ +
Sbjct: 650 RRPELKVLITSATLEAEKFSKYF-----MNAQLFIIPGRTFPVDIRYTKDPEADYLDASL 704
Query: 407 DTAIKIHESMPVGDILAFVIGLEQIEHIIGIL----KQYHNQREDLKLLILPMHGSLPNN 462
T ++IH S P GDIL F+ G E+I+ IL K + DL +ILP++ +LP+
Sbjct: 705 ITVMQIHLSEPPGDILLFLTGQEEIDAACQILYERMKSLGSNVPDL--IILPVYSALPSE 762
Query: 463 EQIKVFRPTPRAMRKIVIATNIAETSITIPGIVYVIDPGFVKARWFNPNTLTNSLVVVPI 522
Q K+F P P RK+VIATNIAETS+TI GI YVIDPGF K + FNP +SLVV PI
Sbjct: 763 MQTKIFEPAPPGSRKVVIATNIAETSLTIDGIYYVIDPGFSKQKCFNPKNGMDSLVVAPI 822
Query: 523 SKASAVQRAGRAGRVRSGHVYRKNFMYNRLFIHFCVSRNIPTIPNDPKDVKCDVMFHKVF 582
S+A+A R RSG R T P KC ++ +
Sbjct: 823 SQAAA--------RQRSGRAGR-------------------TGPG-----KCYRLYTESA 850
Query: 583 FSFFQYLLEAGWCYDTKLIGITEPRRISVTSLANRVSEELRTTLGHTV--------GYTI 634
F LA+ + E RT LG+TV +
Sbjct: 851 FKN--------------------------EMLASSIPEIQRTNLGNTVLTMKAMGINDLL 884
Query: 635 RFDDCTTEDVTKIKYMTE-----GILMREMMTDPLLRKYSVIMLDEVHERTIFTDILMGL 689
FD V + E G L E + L RK + LD + + + +G
Sbjct: 885 NFDFMDPPPVQTLVSAMEQLYSLGALDEEGLLTRLGRKMAEFPLDPQLSKMLIASVDLG- 943
Query: 690 LKKILKDKERDFECSDEIASILSLLQVQDIFIKPSSG-ALSLKARVLRRNFEVEQGDLLT 748
CSDEI +++++L VQ++F +P AL+ + + F +GD LT
Sbjct: 944 -------------CSDEILTVVAMLSVQNVFYRPKEKQALADQKKA---KFFQPEGDHLT 987
Query: 749 LLNIFKFYEKQENKKQFCHKYFFNYKVLKRAAELKNQMILLLKKSSIPLVTSPRNTNAVL 808
LLN+++ ++ + +C + F + L+RA +++ Q+I ++ + + ++++ RN +
Sbjct: 988 LLNVYESWKNSKFSNPWCFENFVQARSLRRAQDVRKQLITIMDRYKLDIISAGRNYTKIQ 1047
Query: 809 KCLTNGFFSNAAYLHYSGVYRTVRGNEDLYIHPSSVLYT 847
K + +GFF+NA+ + Y+T+ + +YIHPSS L+
Sbjct: 1048 KAICSGFFANASKKDPNEGYKTLVEGQPVYIHPSSTLFN 1086
Score = 123 bits (309), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 62/109 (56%), Positives = 80/109 (73%), Gaps = 2/109 (1%)
Query: 587 QYLLEAGWCYDTKLIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTK 646
QYL EAG+ K IG T+PRR++ S++ RV+EE LG VGY IRF+DCT+ + T
Sbjct: 543 QYLAEAGYGTRGK-IGCTQPRRVAAMSVSKRVAEEFGCQLGQEVGYAIRFEDCTSPE-TI 600
Query: 647 IKYMTEGILMREMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKILK 695
IK+MT+GIL+RE + DP L YSVI+LDE HERTI TD+L GLLK+ L+
Sbjct: 601 IKFMTDGILLRECLLDPNLSAYSVIILDEAHERTISTDVLFGLLKQALQ 649
Score = 92.4 bits (228), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/100 (49%), Positives = 70/100 (70%), Gaps = 2/100 (2%)
Query: 43 KFSRLYTEASF-SQLNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRVA 101
K RLYTE++F +++ + PE+QRT L + VL +KA+GI+++L F F PPP Q L A
Sbjct: 841 KCYRLYTESAFKNEMLASSIPEIQRTNLGNTVLTMKAMGINDLLNFDFMDPPPVQTLVSA 900
Query: 102 LELLYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLLSS 141
+E LYSLGA+D G LT+ +G MAE PL P +K+L++S
Sbjct: 901 MEQLYSLGALDEEGLLTR-LGRKMAEFPLDPQLSKMLIAS 939
Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/37 (56%), Positives = 28/37 (75%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDIL 37
MT+GIL+ DP++ YSVI+LD+ HERTI TD+L
Sbjct: 604 MTDGILLRECLLDPNLSAYSVIILDEAHERTISTDVL 640
>sp|Q7QGX9|MED18_ANOGA Mediator of RNA polymerase II transcription subunit 18 OS=Anopheles
gambiae GN=MED18 PE=3 SV=3
Length = 211
Score = 222 bits (566), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 118/211 (55%), Positives = 140/211 (66%), Gaps = 41/211 (19%)
Query: 138 LLSSGSVLDSAVEILLHRLRGLCDNVDSGPETFHDHEMCFSIR--GNQTQPLLLRVRRAL 195
L GS+LDSA E LLHRLRGLCDNVD+ PETF D EMCFS++ +T + +RVRRA
Sbjct: 25 FLLQGSILDSAAENLLHRLRGLCDNVDASPETFSDIEMCFSLKLPTEKTPVMTVRVRRAQ 84
Query: 196 DFPDMPYQLRYIGQPEMGPLLLRVRRALDFPDMPYQLRYIGQPEMGVGDKARPTIVRSSI 255
D + P QLRYIGQPE+G D+ RPT+VRSS+
Sbjct: 85 DV-----------------------------EAPLQLRYIGQPELG--DRTRPTLVRSSL 113
Query: 256 DVACSCTVVEFLTEMGCRMDFEYISRGYMFRKGRMKILVSKIFKMSQGKPSDSGVEPISQ 315
D+AC+ V++FLTEMG R+DFEY ++GYMFRKGRMKI VSKI K + EPISQ
Sbjct: 114 DIACTPHVIDFLTEMGFRLDFEYSTKGYMFRKGRMKITVSKILK--------NMTEPISQ 165
Query: 316 SYLVELSILAPGGQDVIGEDMKAFAEQLKPL 346
SYLVELS+LAP GQD I EDM+ FAEQLKPL
Sbjct: 166 SYLVELSVLAPKGQDAIAEDMRIFAEQLKPL 196
>sp|Q54MH3|DHX16_DICDI Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
OS=Dictyostelium discoideum GN=dhx16 PE=3 SV=1
Length = 1106
Score = 221 bits (563), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 163/517 (31%), Positives = 256/517 (49%), Gaps = 99/517 (19%)
Query: 348 RTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYYSNDPVVNYVQGVVD 407
R LKL+ISSAT+DAE +++ A ++ G Y V+ +Y+ P +Y+ V
Sbjct: 610 RPDLKLLISSATMDAERFSDYFD-----GAPTFNIPGRKYEVTTHYTQAPEADYLDAAVV 664
Query: 408 TAIKIHESMPVGDILAFVIGLEQIEHIIGILKQYHNQREDLK---LLILPMHGSLPNNEQ 464
T ++IH + P+GDIL F+ G E+++ +L Q + K L+I ++ +LP + Q
Sbjct: 665 TVLQIHITEPLGDILVFLTGQEEVDQAAEML-QTRTRGLGTKIKELIITRIYSTLPTDLQ 723
Query: 465 IKVFRPTPRAMRKIVIATNIAETSITIPGIVYVIDPGFVKARWFNPNTLTNSLVVVPISK 524
K+F PTP RK+V+ATNIAETS+TI GI+YVIDPGF K + FNP T SLV+ P
Sbjct: 724 AKIFEPTPPNARKVVLATNIAETSLTIDGIIYVIDPGFCKQKMFNPRTGMESLVITP--- 780
Query: 525 ASAVQRAGRAGRVRSGHVYRKNFMYNRLFIHFCVSRNIPTIPNDPKDVKCDVMFHKVFFS 584
V RA + R G R P KC F
Sbjct: 781 ---VSRA--SANQRKGRAGR-------------------VAPG-----KC--------FR 803
Query: 585 FFQYLLEAGWCYDTKLIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDV 644
F W +D +L N + E RT LG+ V
Sbjct: 804 LF-----TAWAFDNEL-------------EENTIPEIQRTNLGNVVLL------------ 833
Query: 645 TKIKYMTEGILMREMMTDPLLRKYSVIMLDEVH------ERTIFTDILMGL--------L 690
+K M LM DP + + L++++ +R T + + L
Sbjct: 834 --LKSMGINDLMNFDFMDPPPAQTLIAALEQLYALGALNDRGQLTKLGRKMAEFPVDPQL 891
Query: 691 KKILKDKERDFECSDEIASILSLLQVQD-IFIKPSSGALSLKARVLRRNFEVEQGDLLTL 749
K++ E+ ++CS+EI +I ++L V + IF +P + A R+ F QGD LTL
Sbjct: 892 SKMIIASEK-YKCSEEILTICAMLSVGNTIFYRPK--DKAFAADAARKLFFHPQGDHLTL 948
Query: 750 LNIFKFYEKQENKKQFCHKYFFNYKVLKRAAELKNQMILLLKKSSIPLVTSPRNTNAVLK 809
+N+F + + Q+C + F ++ +KRA ++++Q+ LLL++ IPLV++ +T+++ K
Sbjct: 949 MNVFNQWRESGYAVQWCFENFIQHRSMKRAQDVRDQLELLLERVEIPLVSNVDDTDSIRK 1008
Query: 810 CLTNGFFSNAAYLHYSGVYRTVRGNEDLYIHPSSVLY 846
C+ +GFF N+A L SG++RT + N+ + IHPSS L+
Sbjct: 1009 CIASGFFYNSAKLEKSGLFRTTKHNQSVQIHPSSCLF 1045
Score = 119 bits (298), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 59/109 (54%), Positives = 82/109 (75%), Gaps = 2/109 (1%)
Query: 587 QYLLEAGWCYDTKLIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTK 646
QYL EAG+ K IG T+PRR++ S+A RV+EE+ LG+ VGY+IRF+DCT++ T
Sbjct: 502 QYLHEAGFSKTGK-IGCTQPRRVAAMSVAARVAEEVGCKLGNEVGYSIRFEDCTSQK-TV 559
Query: 647 IKYMTEGILMREMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKILK 695
++YMT+G+L+RE +T P L YSV+++DE HERT+ TDIL GLLK I +
Sbjct: 560 LQYMTDGMLVREFLTAPDLASYSVLIIDEAHERTLHTDILFGLLKDITR 608
Score = 92.4 bits (228), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/97 (48%), Positives = 69/97 (71%), Gaps = 2/97 (2%)
Query: 46 RLYTEASF-SQLNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRVALEL 104
RL+T +F ++L E T PE+QRT L + VL LK++GI++++ F F PPPAQ L ALE
Sbjct: 803 RLFTAWAFDNELEENTIPEIQRTNLGNVVLLLKSMGINDLMNFDFMDPPPAQTLIAALEQ 862
Query: 105 LYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLLSS 141
LY+LGA++ G LTK +G MAE P+ P +K++++S
Sbjct: 863 LYALGALNDRGQLTK-LGRKMAEFPVDPQLSKMIIAS 898
Score = 42.0 bits (97), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 68/159 (42%), Gaps = 19/159 (11%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILMECSRKFSRLYTEASFSQLNECT 60
MT+G+L+ P + YSV+++D+ HERT+ TDIL + +R + ++ T
Sbjct: 563 MTDGMLVREFLTAPDLASYSVLIIDEAHERTLHTDILFGLLKDITRFRPDLKLL-ISSAT 621
Query: 61 PPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRVALELLYSLGAMDVNGNLTKP 120
+ ++ G + + P A L A+ + + ++T+P
Sbjct: 622 MDAERFSDYFDGAPTFNIPGRKYEVTTHYTQAPEADYLDAAVVTVLQI-------HITEP 674
Query: 121 VGETMAEMPLHPIHAKVLLSSGSVLDSAVEILLHRLRGL 159
+G+ + V L+ +D A E+L R RGL
Sbjct: 675 LGDIL-----------VFLTGQEEVDQAAEMLQTRTRGL 702
>sp|P24384|PRP22_YEAST Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP22
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=PRP22 PE=1 SV=1
Length = 1145
Score = 221 bits (562), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 158/513 (30%), Positives = 251/513 (48%), Gaps = 88/513 (17%)
Query: 346 LKRTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYYSNDPVVNYVQGV 405
+KR +LK+I++SAT+++ + +++ N I+++ G +PV V YS P ++Y++
Sbjct: 624 IKRPELKVIVTSATLNSAKFSEYF-----LNCPIINIPGKTFPVEVLYSQTPQMDYIEAA 678
Query: 406 VDTAIKIHESMPVGDILAFVIGLEQIEHIIGILKQYHNQREDL--KLLILPMHGSLPNNE 463
+D I IH + GDIL F+ G E+I+ IL D +LLILP++ +LP+
Sbjct: 679 LDCVIDIHINEGPGDILVFLTGQEEIDSCCEILYDRVKTLGDSIGELLILPVYSALPSEI 738
Query: 464 QIKVFRPTPRAMRKIVIATNIAETSITIPGIVYVIDPGFVKARWFNPNTLTNSLVVVPIS 523
Q K+F PTP+ RK+V ATNIAETSITI GI YV+DPGF K +N L+V PIS
Sbjct: 739 QSKIFEPTPKGSRKVVFATNIAETSITIDGIYYVVDPGFAKINIYNARAGIEQLIVSPIS 798
Query: 524 KASAVQRAGRAGRVRSGHVYRKNFMYNRLFIHFCVSRNIPTIPNDPKDVKCDVMFHKVFF 583
+A A Q R G R T P KC ++ +
Sbjct: 799 QAQANQ--------RKGRAGR-------------------TGPG-----KCYRLYTES-- 824
Query: 584 SFFQYLLEAGWCYDTKLIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTED 643
+F+ +LE N V E R L HT+ + D
Sbjct: 825 AFYNEMLE------------------------NTVPEIQRQNLSHTI---LMLKAMGIND 857
Query: 644 VTKIKYMTEGILMREMMTDPLLRKYSVIMLDEV-------HERTIFT---DILMGLLKKI 693
+ K +M + +M + L Y + LD+ E ++F + LL +
Sbjct: 858 LLKFDFMDPP--PKNLMLNALTELYHLQSLDDEGKLTNLGKEMSLFPMDPTLSRSLLSSV 915
Query: 694 LKDKERDFECSDEIASILSLLQVQDIFIKPSSGALSLKARVLRRNFEVEQGDLLTLLNIF 753
D +CSDEI +I+S+L VQ++F +P L ++ + F GD LTLLN++
Sbjct: 916 ------DNQCSDEIVTIISMLSVQNVFYRPKDRQLEADSK--KAKFHHPYGDHLTLLNVY 967
Query: 754 KFYEKQENKKQFCHKYFFNYKVLKRAAELKNQMILLLKKSSIPLVTSPRNTNAVLKCLTN 813
+++ +Q+C F +++ LKRA ++K+Q+ ++ KK + L++ + + + K +
Sbjct: 968 TRWQQANYSEQYCKTNFLHFRHLKRARDVKSQISMIFKKIGLKLISCHSDPDLIRKTFVS 1027
Query: 814 GFFSNAAYLHYSGVYRTVRGNEDLYIHPSSVLY 846
GFF NAA Y+T+ G ++ IHPSS LY
Sbjct: 1028 GFFMNAAKRDSQVGYKTINGGTEVGIHPSSSLY 1060
Score = 125 bits (313), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 61/106 (57%), Positives = 79/106 (74%), Gaps = 2/106 (1%)
Query: 587 QYLLEAGWCYDTKLIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTK 646
QYL E G+ + +IG T+PRR++ S+A RV+EE+ +GH VGYTIRF+D T D T+
Sbjct: 518 QYLDEEGFS-NYGMIGCTQPRRVAAVSVAKRVAEEVGCKVGHDVGYTIRFEDVTGPD-TR 575
Query: 647 IKYMTEGILMREMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKK 692
IKYMT+G+L RE + DP + KYSVIMLDE HERT+ TD+L LLKK
Sbjct: 576 IKYMTDGMLQREALLDPEMSKYSVIMLDEAHERTVATDVLFALLKK 621
Score = 79.7 bits (195), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/100 (44%), Positives = 65/100 (65%), Gaps = 2/100 (2%)
Query: 43 KFSRLYTEASF-SQLNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRVA 101
K RLYTE++F +++ E T PE+QR LS +L LKA+GI+++L+F F PPP + A
Sbjct: 816 KCYRLYTESAFYNEMLENTVPEIQRQNLSHTILMLKAMGINDLLKFDFMDPPPKNLMLNA 875
Query: 102 LELLYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLLSS 141
L LY L ++D G LT +G+ M+ P+ P ++ LLSS
Sbjct: 876 LTELYHLQSLDDEGKLTN-LGKEMSLFPMDPTLSRSLLSS 914
Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 29/43 (67%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILMECSRK 43
MT+G+L DP + KYSVIMLD+ HERT+ TD+L +K
Sbjct: 579 MTDGMLQREALLDPEMSKYSVIMLDEAHERTVATDVLFALLKK 621
>sp|Q9XZT1|MED18_DROME Mediator of RNA polymerase II transcription subunit 18
OS=Drosophila melanogaster GN=MED18 PE=1 SV=1
Length = 217
Score = 220 bits (560), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 115/209 (55%), Positives = 143/209 (68%), Gaps = 33/209 (15%)
Query: 139 LSSGSVLDSAVEILLHRLRGLCDNVDSGPETFHDHEMCFSIRGNQTQPLLLRVRRALDFP 198
L GS+LDSAVE L+HRL+GLCDNVD+ PE FHD E+C S+R
Sbjct: 26 LLQGSILDSAVEHLMHRLKGLCDNVDTSPEPFHDLEVCMSLR------------------ 67
Query: 199 DMPYQLRYIGQPEMG-PLLLRVRRALDFPDMPYQLRYIGQPEMGVGDKARPTIVRSSIDV 257
QP PLLLRVRRAL D P+Q+RY+G PE+ D RPT+VRS +D
Sbjct: 68 ----------QPNANQPLLLRVRRALGR-DAPFQMRYLGNPEV---DLRRPTLVRSCMDC 113
Query: 258 ACSCTVVEFLTEMGCRMDFEYISRGYMFRKGRMKILVSKIFKMSQGKPSDSGVEPISQSY 317
AC+ ++EFLTEMG R++FEYI++GYMFRKGRMKI VSK+ K+ GK D EPISQSY
Sbjct: 114 ACTNGILEFLTEMGFRLEFEYIAKGYMFRKGRMKITVSKLIKIVPGKQQDMANEPISQSY 173
Query: 318 LVELSILAPGGQDVIGEDMKAFAEQLKPL 346
+VELS++AP GQ+ +GE+M+ FAEQLKPL
Sbjct: 174 IVELSVVAPTGQENVGEEMRVFAEQLKPL 202
>sp|Q54NJ4|DHX15_DICDI Putative pre-mRNA-splicing factor ATP-dependent RNA helicase dhx15
OS=Dictyostelium discoideum GN=dhx15 PE=3 SV=1
Length = 727
Score = 206 bits (523), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 152/503 (30%), Positives = 243/503 (48%), Gaps = 72/503 (14%)
Query: 347 KRTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYYSNDPVVNYVQGVV 406
+R LKLI+ SAT++A + +++ NA ++ V G L+PV ++Y+ + +Y++ V
Sbjct: 220 RRKDLKLIVMSATLEAGKFQKYFE-----NAPLIKVPGRLHPVEIFYTEEAAKDYLESAV 274
Query: 407 DTAIKIHESMPVGDILAFVIGLEQIEHIIGILKQYHNQREDLKLLILPMHGSLPNNEQIK 466
T I IH + GDIL F+ G E+IE +++ +R + LP++ SLP +Q K
Sbjct: 275 RTVIDIHTNEGTGDILVFLTGEEEIEDTCAKIQRETRERGLPPMKTLPLYSSLPIYQQSK 334
Query: 467 VFRPTPRAMRKIVIATNIAETSITIPGIVYVIDPGFVKARWFNPNTLTNSLVVVPISKAS 526
+F RK +++TNIAETS+TI GIV+V+DPGF K + +NP + SL+V PISKAS
Sbjct: 335 IFDTCKE--RKCIVSTNIAETSLTIDGIVFVVDPGFSKQKTYNPRSRVESLLVAPISKAS 392
Query: 527 AVQRAGRAGRVRSGHVYRKNFMYNRLFIHFCVSRNIPTIPNDPKDVKCDVMFHKVFFSFF 586
A QRAGRAGR R G +R + F + + P I S
Sbjct: 393 ANQRAGRAGRTRPGKCFR--LYTEKAFKELMIQQTHPEI------------LRSNLASVV 438
Query: 587 QYLLEAGWCYDTKLIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTK 646
LL+ G D +P V R E L H +G DD +T+
Sbjct: 439 LQLLKLG-VVDLVHFDFMDP---PVPDTLIRALEVL-----HYLGA---LDD--EGQLTE 484
Query: 647 IKYMTEGILMREMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKILKDKERDFECSDE 706
I G +M E DP L K ML ER+ +IL
Sbjct: 485 I-----GSIMSEFPLDPQLSK----MLIVSAERSCSNEIL-------------------- 515
Query: 707 IASILSLLQVQDIFIKPSSGALSLKARVLRRNFEVEQGDLLTLLNIFKFYEKQENKKQFC 766
+I ++L + F++P ++A +++F+ GD LT+LN++ ++K +C
Sbjct: 516 --TIAAMLSAPNCFMRPKDN--RIEADSAKKSFDHFDGDHLTMLNVYHSFKKNGEDPTWC 571
Query: 767 HKYFFNYKVLKRAAELKNQMILLLKKSSIPLVTSPRNTN----AVLKCLTNGFFSNAAYL 822
+ F N++ +K+A +++Q+ +L + +PLV+ N+ + KC+ GFF A
Sbjct: 572 YDNFLNHRAIKQADSVRSQLARILTRFKLPLVSGDVNSKFYYENIKKCIAAGFFMQVAKC 631
Query: 823 HYSGVYRTVRGNEDLYIHPSSVL 845
+Y T+ + + HPS+ L
Sbjct: 632 EKKNIYFTLGDEQSVIFHPSTGL 654
Score = 121 bits (304), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 57/112 (50%), Positives = 85/112 (75%), Gaps = 1/112 (0%)
Query: 587 QYLLEAGWCYDTKLIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTK 646
Q++++AG K++G+T+PRR++ S+A RVSEE+ LG VGY+IRF++ ++ T
Sbjct: 112 QFVVDAGLIRPGKMVGVTQPRRVAAISVAKRVSEEMDFELGEEVGYSIRFEELSSAR-TF 170
Query: 647 IKYMTEGILMREMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKILKDKE 698
+KY+T+G+L+RE M+DP L KY VI+LDE HERT+ TDIL GL+K ILK ++
Sbjct: 171 MKYLTDGMLLRESMSDPTLNKYDVIILDEAHERTLSTDILFGLIKDILKRRK 222
Score = 77.4 bits (189), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 44/98 (44%), Positives = 63/98 (64%), Gaps = 2/98 (2%)
Query: 46 RLYTEASFSQLN-ECTPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRVALEL 104
RLYTE +F +L + T PE+ R+ L+S VLQL LG+ +++ F F PP L ALE+
Sbjct: 410 RLYTEKAFKELMIQQTHPEILRSNLASVVLQLLKLGVVDLVHFDFMDPPVPDTLIRALEV 469
Query: 105 LYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLLSSG 142
L+ LGA+D G LT+ +G M+E PL P +K+L+ S
Sbjct: 470 LHYLGALDDEGQLTE-IGSIMSEFPLDPQLSKMLIVSA 506
Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 28/38 (73%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILM 38
+T+G+L+ DP++ KY VI+LD+ HERT+ TDIL
Sbjct: 174 LTDGMLLRESMSDPTLNKYDVIILDEAHERTLSTDILF 211
>sp|Q9H5Z1|DHX35_HUMAN Probable ATP-dependent RNA helicase DHX35 OS=Homo sapiens GN=DHX35
PE=1 SV=2
Length = 703
Score = 195 bits (495), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 99/207 (47%), Positives = 143/207 (69%), Gaps = 9/207 (4%)
Query: 347 KRTQLKLIISSATVDAEEICQFYNISASSN-----ATILSVKGHLYPVSVYYSNDPVVNY 401
KR L+LI++SAT+DA++ F+N + +S+ IL+V+G +PV ++Y PV +Y
Sbjct: 198 KRGDLRLIVASATLDADKFRDFFNQNETSDPARDTCVILTVEGRTFPVDIFYLQSPVPDY 257
Query: 402 VQGVVDTAIKIHESMPVGDILAFVIGLEQIEHIIGILKQYHNQ--REDLK--LLILPMHG 457
++ V+T +KIH++ GD+LAF+ G E++E ++ +L + R +K L +LPM+
Sbjct: 258 IKSTVETVVKIHQTEGDGDVLAFLTGQEEVETVVSMLIEQARALARTGMKRHLRVLPMYA 317
Query: 458 SLPNNEQIKVFRPTPRAMRKIVIATNIAETSITIPGIVYVIDPGFVKARWFNPNTLTNSL 517
LP+ EQ+KVF R++RK+++ATN+AETSITI GIVYVID GFVK R +NP T L
Sbjct: 318 GLPSFEQMKVFERVSRSVRKVIVATNVAETSITISGIVYVIDCGFVKLRAYNPRTAIECL 377
Query: 518 VVVPISKASAVQRAGRAGRVRSGHVYR 544
VVVP+S+ASA QRAGR GR RSG YR
Sbjct: 378 VVVPVSQASANQRAGRGGRSRSGKCYR 404
Score = 155 bits (391), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 80/160 (50%), Positives = 103/160 (64%), Gaps = 26/160 (16%)
Query: 587 QYLLEAGWCYDTKLIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTK 646
QYL EAGW + +++G+T+PRR++ ++A RV+EE LGH VGY IRFDDCT + T+
Sbjct: 89 QYLAEAGWTAEGRVVGVTQPRRVAAVTVAGRVAEERGAVLGHEVGYCIRFDDCTDQLATR 148
Query: 647 IKYMTEGILMREMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKILK----------- 695
IK++T+G+L+REMM DPLL KYSVIMLDE HERT++TDI +GLLKKI K
Sbjct: 149 IKFLTDGMLVREMMVDPLLTKYSVIMLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVAS 208
Query: 696 -----DKERDF----ECSDEIASILSLLQVQ------DIF 720
DK RDF E SD +L V+ DIF
Sbjct: 209 ATLDADKFRDFFNQNETSDPARDTCVILTVEGRTFPVDIF 248
Score = 137 bits (344), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 65/155 (41%), Positives = 103/155 (66%), Gaps = 6/155 (3%)
Query: 700 DFECSDEIASILSLLQVQDIFIKPSSGALSLKARVLR--RNFEVEQGDLLTLLNIFKFYE 757
+F CS EI SI +++Q+Q+IF+ P + K+ +R R F VE+GD LT+LNI++ +
Sbjct: 501 NFGCSQEILSIAAMMQIQNIFVVPPNQ----KSHAIRVHRKFAVEEGDHLTMLNIYEAFI 556
Query: 758 KQENKKQFCHKYFFNYKVLKRAAELKNQMILLLKKSSIPLVTSPRNTNAVLKCLTNGFFS 817
K ++C ++F NYK L RAA ++ Q+ LL K +P +S + + VL+C+ +GFF+
Sbjct: 557 KHNKDSKWCQEHFLNYKGLVRAATVREQLKKLLVKFQVPRKSSEGDPDLVLRCIVSGFFA 616
Query: 818 NAAYLHYSGVYRTVRGNEDLYIHPSSVLYTLQQPQ 852
NAA H +G YRT+R + +L+IHP+SVLY + P+
Sbjct: 617 NAARFHSTGAYRTIRDDHELHIHPASVLYAEKPPR 651
Score = 121 bits (303), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 59/103 (57%), Positives = 78/103 (75%)
Query: 41 SRKFSRLYTEASFSQLNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRV 100
S K RLYTE +F +L + T PEMQR+ L+ +LQLKALGI N+LRF F SPPPAQ++
Sbjct: 399 SGKCYRLYTEEAFDKLPQSTVPEMQRSNLAPVILQLKALGIDNVLRFHFMSPPPAQSMVQ 458
Query: 101 ALELLYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLLSSGS 143
ALELLY+LG +D + LT+P+G +AE PL+P+ AK+LL SG+
Sbjct: 459 ALELLYALGGLDKDCRLTEPLGMRIAEFPLNPMFAKMLLESGN 501
Score = 47.4 bits (111), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 32/46 (69%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILMECSRKFSR 46
+T+G+L+ DP + KYSVIMLD+ HERT++TDI + +K +
Sbjct: 152 LTDGMLVREMMVDPLLTKYSVIMLDEAHERTLYTDIAIGLLKKIQK 197
>sp|Q5RBD4|DHX35_PONAB Probable ATP-dependent RNA helicase DHX35 OS=Pongo abelii GN=DHX35
PE=2 SV=1
Length = 720
Score = 194 bits (494), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 100/207 (48%), Positives = 142/207 (68%), Gaps = 9/207 (4%)
Query: 347 KRTQLKLIISSATVDAEEICQFYNISASSN-----ATILSVKGHLYPVSVYYSNDPVVNY 401
KR L+LI++SAT+DA++ F+N + +S+ IL+V G +PV ++Y PV +Y
Sbjct: 198 KRGDLRLIVASATLDADKFRDFFNQNETSDPARDTCVILTVGGRTFPVDIFYLQSPVPDY 257
Query: 402 VQGVVDTAIKIHESMPVGDILAFVIGLEQIEHIIGILKQYHNQ--REDLK--LLILPMHG 457
++ V+T +KIH++ GDILAF+ G E++E ++ +L + R +K L +LPM+
Sbjct: 258 IKSTVETVVKIHQTEGDGDILAFLTGQEEVETVVSMLIEQARALARTGMKRHLRVLPMYA 317
Query: 458 SLPNNEQIKVFRPTPRAMRKIVIATNIAETSITIPGIVYVIDPGFVKARWFNPNTLTNSL 517
LP+ EQ+KVF R++RK+++ATN+AETSITI GIVYVID GFVK R +NP T L
Sbjct: 318 GLPSFEQMKVFERVSRSVRKVIVATNVAETSITISGIVYVIDCGFVKLRAYNPRTAIECL 377
Query: 518 VVVPISKASAVQRAGRAGRVRSGHVYR 544
VVVP+S+ASA QRAGR GR RSG YR
Sbjct: 378 VVVPVSQASANQRAGRGGRSRSGKCYR 404
Score = 154 bits (390), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 67/111 (60%), Positives = 89/111 (80%)
Query: 587 QYLLEAGWCYDTKLIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTK 646
QYL EAGW + +++G+T+PRR++ ++A RV+EE LGH VGY IRFDDCT + T+
Sbjct: 89 QYLAEAGWTAEGRVVGVTQPRRVAAVTVAGRVAEERGAVLGHEVGYCIRFDDCTDQLATR 148
Query: 647 IKYMTEGILMREMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKILKDK 697
IK++T+G+L+REMM DPLL KYSVIMLDE HERT++TDI +GLLKKI K +
Sbjct: 149 IKFLTDGMLVREMMVDPLLTKYSVIMLDEAHERTLYTDIAIGLLKKIQKKR 199
Score = 138 bits (348), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 65/155 (41%), Positives = 104/155 (67%), Gaps = 6/155 (3%)
Query: 700 DFECSDEIASILSLLQVQDIFIKPSSGALSLKARVLR--RNFEVEQGDLLTLLNIFKFYE 757
+F CS EI SI +++Q+Q+IF+ P + K++ +R R F VE+GD LT+LN+++ +
Sbjct: 501 NFGCSQEILSIAAMMQIQNIFVVPPNQ----KSQAIRVHRKFAVEEGDHLTMLNVYEAFI 556
Query: 758 KQENKKQFCHKYFFNYKVLKRAAELKNQMILLLKKSSIPLVTSPRNTNAVLKCLTNGFFS 817
K Q+C ++F NYK L RAA ++ Q+ LL K +P +S + + VL+C+ +GFF+
Sbjct: 557 KHNKNSQWCQEHFLNYKGLVRAATVREQLKKLLVKFQVPKKSSEGDPDPVLRCIVSGFFA 616
Query: 818 NAAYLHYSGVYRTVRGNEDLYIHPSSVLYTLQQPQ 852
NAA H +G YRT+R + +L+IHP+SVLY + P+
Sbjct: 617 NAARFHSTGAYRTIRDDHELHIHPASVLYAEKPPR 651
Score = 120 bits (302), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 59/103 (57%), Positives = 78/103 (75%)
Query: 41 SRKFSRLYTEASFSQLNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRV 100
S K RLYTE +F +L + T PEMQR+ L+ +LQLKALGI N+LRF F SPPPAQ++
Sbjct: 399 SGKCYRLYTEEAFDKLPQSTVPEMQRSNLAPVILQLKALGIDNVLRFHFMSPPPAQSMVQ 458
Query: 101 ALELLYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLLSSGS 143
ALELLY+LG +D + LT+P+G +AE PL+P+ AK+LL SG+
Sbjct: 459 ALELLYALGGLDKDCRLTEPLGMRIAEFPLNPMFAKMLLESGN 501
Score = 47.4 bits (111), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 32/46 (69%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILMECSRKFSR 46
+T+G+L+ DP + KYSVIMLD+ HERT++TDI + +K +
Sbjct: 152 LTDGMLVREMMVDPLLTKYSVIMLDEAHERTLYTDIAIGLLKKIQK 197
>sp|Q9BUE0|MED18_HUMAN Mediator of RNA polymerase II transcription subunit 18 OS=Homo
sapiens GN=MED18 PE=1 SV=1
Length = 208
Score = 190 bits (482), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 100/208 (48%), Positives = 134/208 (64%), Gaps = 33/208 (15%)
Query: 139 LSSGSVLDSAVEILLHRLRGLCDNVDSGPETFHDHEMCFSIRGNQTQPLLLRVRRALDFP 198
L GSVLD ++E L+HRLRGLCDN++ PETF DHEM F ++G Q P +LR R
Sbjct: 22 LLQGSVLDHSLESLIHRLRGLCDNME--PETFLDHEMVFLLKGQQASPFVLRAR------ 73
Query: 199 DMPYQLRYIGQPEMGPLLLRVRRALDFPDMPYQLRYIGQPEMGVGDKARPTIVRSSIDVA 258
R++D P+ LRY+GQPEMG DK R +VR+ +D+A
Sbjct: 74 ----------------------RSMDRAGAPWHLRYLGQPEMG--DKNRHALVRNCVDIA 109
Query: 259 CSCTVVEFLTEMGCRMDFEYISRGYMFRKGRMKILVSKIFKMSQGKPSDSGVEPISQSYL 318
S + +FL EMG RMD E++++G++FRKG MKI+V KIF++ +DS E +S SYL
Sbjct: 110 TSENLTDFLMEMGFRMDHEFVAKGHLFRKGIMKIMVYKIFRILVPGNTDS-TEALSLSYL 168
Query: 319 VELSILAPGGQDVIGEDMKAFAEQLKPL 346
VELS++AP GQD++ +DMK FAEQLKPL
Sbjct: 169 VELSVVAPAGQDMVSDDMKNFAEQLKPL 196
>sp|Q0VCD4|MED18_BOVIN Mediator of RNA polymerase II transcription subunit 18 OS=Bos
taurus GN=MED18 PE=2 SV=1
Length = 208
Score = 189 bits (481), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 100/208 (48%), Positives = 134/208 (64%), Gaps = 33/208 (15%)
Query: 139 LSSGSVLDSAVEILLHRLRGLCDNVDSGPETFHDHEMCFSIRGNQTQPLLLRVRRALDFP 198
L GSVLD ++E L+HRLRGLCDN++ PETF DHEM F ++G Q P +LR R
Sbjct: 22 LLQGSVLDHSLESLIHRLRGLCDNME--PETFVDHEMVFLLKGQQASPFVLRAR------ 73
Query: 199 DMPYQLRYIGQPEMGPLLLRVRRALDFPDMPYQLRYIGQPEMGVGDKARPTIVRSSIDVA 258
R+LD P+ LRY+GQPEMG DK R +VR+ +D+A
Sbjct: 74 ----------------------RSLDRAGAPWHLRYLGQPEMG--DKNRHALVRNCVDIA 109
Query: 259 CSCTVVEFLTEMGCRMDFEYISRGYMFRKGRMKILVSKIFKMSQGKPSDSGVEPISQSYL 318
S + +FL EMG RMD E+++RG++FRKG MKI+V KIF++ +D+ E +S SYL
Sbjct: 110 TSENLTDFLMEMGFRMDHEFVARGHLFRKGIMKIVVYKIFRILVPGNTDN-TEALSLSYL 168
Query: 319 VELSILAPGGQDVIGEDMKAFAEQLKPL 346
VELS++AP GQD++ +DM+ FAEQLKPL
Sbjct: 169 VELSVVAPAGQDMVSDDMRNFAEQLKPL 196
>sp|Q7T3H7|MED18_DANRE Mediator of RNA polymerase II transcription subunit 18 OS=Danio
rerio GN=med18 PE=2 SV=1
Length = 208
Score = 189 bits (479), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 99/208 (47%), Positives = 137/208 (65%), Gaps = 33/208 (15%)
Query: 139 LSSGSVLDSAVEILLHRLRGLCDNVDSGPETFHDHEMCFSIRGNQTQPLLLRVRRALDFP 198
L GSVLD ++E LLHRLRGLCDN++ PE+F DHE+ + ++G Q P +LR
Sbjct: 22 LLQGSVLDQSLESLLHRLRGLCDNME--PESFADHELVYLLKGQQGNPFILRA------- 72
Query: 199 DMPYQLRYIGQPEMGPLLLRVRRALDFPDMPYQLRYIGQPEMGVGDKARPTIVRSSIDVA 258
RR+L P +P+ LRY+GQPE VGDK+R +VR+ +DVA
Sbjct: 73 ---------------------RRSLLDPSVPWHLRYLGQPE--VGDKSRHALVRNCVDVA 109
Query: 259 CSCTVVEFLTEMGCRMDFEYISRGYMFRKGRMKILVSKIFKMSQGKPSDSGVEPISQSYL 318
S ++ +FL EMG RMD E++++G +FRKG MK++VSK+ ++ +D+ EP+S SYL
Sbjct: 110 ASHSLPDFLNEMGFRMDHEFVAKGQVFRKGVMKVVVSKLSRVLVPGNTDN-TEPLSLSYL 168
Query: 319 VELSILAPGGQDVIGEDMKAFAEQLKPL 346
VELS+LAP GQD + EDM++FAEQLKPL
Sbjct: 169 VELSVLAPAGQDTVSEDMRSFAEQLKPL 196
>sp|Q9CZ82|MED18_MOUSE Mediator of RNA polymerase II transcription subunit 18 OS=Mus
musculus GN=Med18 PE=2 SV=1
Length = 208
Score = 187 bits (476), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 98/208 (47%), Positives = 134/208 (64%), Gaps = 33/208 (15%)
Query: 139 LSSGSVLDSAVEILLHRLRGLCDNVDSGPETFHDHEMCFSIRGNQTQPLLLRVRRALDFP 198
L GSVLD ++E L+HRLRGLCDN++ PETF DHEM F ++G Q P +LR R
Sbjct: 22 LLQGSVLDHSLESLIHRLRGLCDNME--PETFLDHEMVFLLKGQQASPFVLRAR------ 73
Query: 199 DMPYQLRYIGQPEMGPLLLRVRRALDFPDMPYQLRYIGQPEMGVGDKARPTIVRSSIDVA 258
R++D P+ LRY+GQPEMG DK R +VR+ +D+A
Sbjct: 74 ----------------------RSMDRAGAPWHLRYLGQPEMG--DKNRHALVRNCVDIA 109
Query: 259 CSCTVVEFLTEMGCRMDFEYISRGYMFRKGRMKILVSKIFKMSQGKPSDSGVEPISQSYL 318
S + +FL EMG RMD E++++G++FRKG MK++V KIF++ +DS E +S SYL
Sbjct: 110 TSENLTDFLMEMGFRMDHEFVAKGHLFRKGIMKVVVYKIFRILVPGNTDS-TEALSLSYL 168
Query: 319 VELSILAPGGQDVIGEDMKAFAEQLKPL 346
VELS++AP GQD++ +DM+ FAEQLKPL
Sbjct: 169 VELSVVAPAGQDMVSDDMRNFAEQLKPL 196
>sp|Q28GE1|MED18_XENTR Mediator of RNA polymerase II transcription subunit 18 OS=Xenopus
tropicalis GN=med18 PE=2 SV=1
Length = 208
Score = 186 bits (471), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 96/208 (46%), Positives = 131/208 (62%), Gaps = 33/208 (15%)
Query: 139 LSSGSVLDSAVEILLHRLRGLCDNVDSGPETFHDHEMCFSIRGNQTQPLLLRVRRALDFP 198
L GS+LD +E LLHRLRGLCDN++ PETF DHE + ++G Q P +LR R
Sbjct: 22 LLQGSILDQGLESLLHRLRGLCDNME--PETFADHESVYLLKGQQASPFVLRAR------ 73
Query: 199 DMPYQLRYIGQPEMGPLLLRVRRALDFPDMPYQLRYIGQPEMGVGDKARPTIVRSSIDVA 258
R LD P P+ LRY+GQPE GD++R T+VR+ +D+A
Sbjct: 74 ----------------------RPLDRPGAPWHLRYLGQPE--AGDRSRHTLVRNCVDIA 109
Query: 259 CSCTVVEFLTEMGCRMDFEYISRGYMFRKGRMKILVSKIFKMSQGKPSDSGVEPISQSYL 318
S + EFL EMG RMD E+++RG++FRKG MK+ V K+F++ ++ G EP+S SYL
Sbjct: 110 TSDVLPEFLQEMGFRMDHEFVARGHLFRKGVMKVAVYKVFRVLVAGAAE-GAEPLSLSYL 168
Query: 319 VELSILAPGGQDVIGEDMKAFAEQLKPL 346
VELS +AP GQD I ++++ FAEQL+PL
Sbjct: 169 VELSAVAPAGQDNIADEVRGFAEQLRPL 196
>sp|Q6DD39|MED18_XENLA Mediator of RNA polymerase II transcription subunit 18 OS=Xenopus
laevis GN=med18 PE=2 SV=1
Length = 208
Score = 185 bits (470), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 96/208 (46%), Positives = 131/208 (62%), Gaps = 33/208 (15%)
Query: 139 LSSGSVLDSAVEILLHRLRGLCDNVDSGPETFHDHEMCFSIRGNQTQPLLLRVRRALDFP 198
L GS+LD +E LLHRLRGLCDN++ PETF DHE + ++G Q P +LR R
Sbjct: 22 LLQGSILDQGLESLLHRLRGLCDNME--PETFADHESVYLLKGQQASPFVLRAR------ 73
Query: 199 DMPYQLRYIGQPEMGPLLLRVRRALDFPDMPYQLRYIGQPEMGVGDKARPTIVRSSIDVA 258
R LD P P+ LRY+GQPE GD++R T+VR+ +D+A
Sbjct: 74 ----------------------RPLDRPGAPWHLRYLGQPE--AGDRSRHTLVRNCVDIA 109
Query: 259 CSCTVVEFLTEMGCRMDFEYISRGYMFRKGRMKILVSKIFKMSQGKPSDSGVEPISQSYL 318
S + EFL EMG RMD E+++RG++FRKG MK+ V K+F++ ++ G EP+S SYL
Sbjct: 110 TSDVLPEFLQEMGFRMDHEFVARGHLFRKGVMKVAVYKVFRVLVSGAAE-GAEPLSLSYL 168
Query: 319 VELSILAPGGQDVIGEDMKAFAEQLKPL 346
VELS +AP GQD I ++++ FAEQL+PL
Sbjct: 169 VELSAVAPAGQDNIADEVRGFAEQLRPL 196
>sp|Q10752|CDC28_SCHPO Pre-mRNA-splicing factor ATP-dependent RNA helicase-like protein
cdc28 OS=Schizosaccharomyces pombe (strain 972 / ATCC
24843) GN=cdc28 PE=3 SV=2
Length = 1055
Score = 177 bits (448), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 91/206 (44%), Positives = 131/206 (63%), Gaps = 10/206 (4%)
Query: 348 RTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYYSNDPVVNYVQGVVD 407
R LK++ISSAT+DAE+ +++ A + V G YPV +YY+ P NY+Q +
Sbjct: 562 RPDLKVLISSATIDAEKFSAYFD-----EAPVFYVPGRRYPVDIYYTPQPEANYIQAAIT 616
Query: 408 TAIKIHESMPVGDILAFVIGLEQIEHIIGILKQYHN--QREDLKLLILPMHGSLPNNEQI 465
T ++IH + P GDIL F+ G ++IE + +++ + ++++ P++ +LP+ Q
Sbjct: 617 TILQIHTTQPAGDILVFLTGQDEIELMSENMQELCRILGKRIPEIILCPIYANLPSELQA 676
Query: 466 KVFRPTPRAMRKIVIATNIAETSITIPGIVYVIDPGFVKARWFNPNTLTNSLVVVPISKA 525
K+F PTP RK+V+ATNIAETSITI G+ +VID GFVK +NP T SLV VP S+A
Sbjct: 677 KIFDPTPPGARKVVLATNIAETSITIDGVNFVIDSGFVKQNMYNPRTGMESLVSVPCSRA 736
Query: 526 SAVQRAGRAGRVRSGHVYRKNFMYNR 551
SA QRAGRAGRV G +R +Y R
Sbjct: 737 SADQRAGRAGRVGPGKCFR---LYTR 759
Score = 116 bits (291), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 56/109 (51%), Positives = 80/109 (73%), Gaps = 1/109 (0%)
Query: 587 QYLLEAGWCYDTKLIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTK 646
Q+L EAG+ K I T+PRR++ S+A RV++E+ LG VGY+IRF++ T+E T
Sbjct: 453 QFLHEAGYTKGNKKICCTQPRRVAAMSVAARVAKEMDVRLGQEVGYSIRFENATSEK-TV 511
Query: 647 IKYMTEGILMREMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKILK 695
IKY+T+G+L+RE +T+P L YSVI++DE HERT+ TDIL GL+K I +
Sbjct: 512 IKYLTDGMLLREFLTEPDLASYSVIIIDEAHERTLHTDILFGLVKDIAR 560
Score = 88.2 bits (217), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/146 (36%), Positives = 85/146 (58%), Gaps = 5/146 (3%)
Query: 701 FECSDEIASILSLL-QVQDIFIKPSSGALSLKARVLRRNFEVEQGDLLTLLNIFKFYEKQ 759
+ C +E+ SI+S+L + +F +P + +A R NF GD LTLL+I+ +
Sbjct: 853 YGCVEEVLSIVSMLGEASSLFYRPKDKIM--EADKARANFTQPGGDHLTLLHIWNEWVDT 910
Query: 760 ENKKQFCHKYFFNYKVLKRAAELKNQMILLLKKSSIPLVT-SPRNTNAVLKCLTNGFFSN 818
+ + + F YK L RA ++++Q+ L ++ I LVT S + + + K +T G+FSN
Sbjct: 911 DFSYNWARENFLQYKSLCRARDVRDQLANLCERVEIELVTNSSESLDPIKKAITAGYFSN 970
Query: 819 AAYLHYSG-VYRTVRGNEDLYIHPSS 843
AA L SG YRTV+ N+ +YIHPSS
Sbjct: 971 AARLDRSGDSYRTVKSNQTVYIHPSS 996
Score = 88.2 bits (217), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/98 (47%), Positives = 68/98 (69%), Gaps = 2/98 (2%)
Query: 46 RLYTEASFS-QLNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRVALEL 104
RLYT +++ +L+ T PE+QRT L++ VL LK+LGI+N+L F F PP + L +LEL
Sbjct: 755 RLYTRRTYNNELDMVTSPEIQRTNLTNIVLLLKSLGINNLLDFDFMDAPPPETLMRSLEL 814
Query: 105 LYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLLSSG 142
LY+LGA++ G LTK +G MAE P P+ +K L++S
Sbjct: 815 LYALGALNNRGELTK-LGRQMAEFPTDPMLSKSLIASS 851
Score = 40.4 bits (93), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 30/47 (63%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILMECSRKFSRL 47
+T+G+L+ +P + YSVI++D+ HERT+ TDIL + +R
Sbjct: 515 LTDGMLLREFLTEPDLASYSVIIIDEAHERTLHTDILFGLVKDIARF 561
>sp|Q14562|DHX8_HUMAN ATP-dependent RNA helicase DHX8 OS=Homo sapiens GN=DHX8 PE=1 SV=1
Length = 1220
Score = 176 bits (445), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 94/221 (42%), Positives = 138/221 (62%), Gaps = 9/221 (4%)
Query: 347 KRTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYYSNDPVVNYVQGVV 406
KR +KLI++SAT+DA + Q++ A I ++ G YPV + Y+ +P +Y+ +
Sbjct: 707 KRQDMKLIVTSATLDAVKFSQYF-----YEAPIFTIPGRTYPVEILYTKEPETDYLDASL 761
Query: 407 DTAIKIHESMPVGDILAFVIGLEQIEHIIGIL-KQYHNQREDL-KLLILPMHGSLPNNEQ 464
T ++IH + P GDIL F+ G E+I+ IL ++ + D+ +L+ILP++ +LP+ Q
Sbjct: 762 ITVMQIHLTEPPGDILVFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQ 821
Query: 465 IKVFRPTPRAMRKIVIATNIAETSITIPGIVYVIDPGFVKARWFNPNTLTNSLVVVPISK 524
++F P P RK+VIATNIAETS+TI GI YV+DPGFVK + +N T + LVV PIS+
Sbjct: 822 TRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQ 881
Query: 525 ASAVQRAGRAGRVRSGHVYRKNFMYNRLFIHFCVSRNIPTI 565
A A QRAGRAGR G YR R + ++ N+P I
Sbjct: 882 AQAKQRAGRAGRTGPGKCYR--LYTERAYRDEMLTTNVPEI 920
Score = 130 bits (326), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 64/112 (57%), Positives = 84/112 (75%), Gaps = 2/112 (1%)
Query: 587 QYLLEAGWCYDTKLIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTK 646
QYL EAG+ K IG T+PRR++ S+A RVSEE LG VGYTIRF+DCT+ + T
Sbjct: 600 QYLAEAGYTSRGK-IGCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPE-TV 657
Query: 647 IKYMTEGILMREMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKILKDKE 698
IKYMT+G+L+RE + DP L +Y++IMLDE HERTI TD+L GLLKK ++ ++
Sbjct: 658 IKYMTDGMLLRECLIDPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQ 709
Score = 92.4 bits (228), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 87/148 (58%), Gaps = 4/148 (2%)
Query: 703 CSDEIASILSLLQVQDIFIKPSSG-ALSLKARVLRRNFEVEQGDLLTLLNIFKFYEKQEN 761
CS+E+ +I+S+L VQ++F +P AL+ + + F +GD LTLL ++ ++ +
Sbjct: 1001 CSEEMLTIVSMLSVQNVFYRPKDKQALADQKKA---KFHQTEGDHLTLLAVYNSWKNNKF 1057
Query: 762 KKQFCHKYFFNYKVLKRAAELKNQMILLLKKSSIPLVTSPRNTNAVLKCLTNGFFSNAAY 821
+C++ F + L+RA +++ QM+ ++ + + +V+ ++T V K + +GFF NAA
Sbjct: 1058 SNPWCYENFIQARSLRRAQDIRKQMLGIMDRHKLDVVSCGKSTVRVQKAICSGFFRNAAK 1117
Query: 822 LHYSGVYRTVRGNEDLYIHPSSVLYTLQ 849
YRT+ + +YIHPSS L+ Q
Sbjct: 1118 KDPQEGYRTLIDQQVVYIHPSSALFNRQ 1145
Score = 85.9 bits (211), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/100 (47%), Positives = 66/100 (66%), Gaps = 2/100 (2%)
Query: 43 KFSRLYTEASF-SQLNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRVA 101
K RLYTE ++ ++ PE+QRT L+S VL LKA+GI+++L F F PP + L A
Sbjct: 898 KCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPMETLITA 957
Query: 102 LELLYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLLSS 141
+E LY+LGA+D G LT+ +G MAE PL P+ K+L+ S
Sbjct: 958 MEQLYTLGALDDEGLLTR-LGRRMAEFPLEPMLCKMLIMS 996
Score = 44.3 bits (103), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 28/37 (75%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDIL 37
MT+G+L+ DP + +Y++IMLD+ HERTI TD+L
Sbjct: 661 MTDGMLLRECLIDPDLTQYAIIMLDEAHERTIHTDVL 697
>sp|Q9BKQ8|DHX35_CAEEL Probable ATP-dependent RNA helicase DHX35 homolog OS=Caenorhabditis
elegans GN=Y67D2.6 PE=3 SV=1
Length = 732
Score = 176 bits (445), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 91/203 (44%), Positives = 131/203 (64%), Gaps = 6/203 (2%)
Query: 348 RTQLKLIISSATVDAEEICQFYNISASSN-----ATILSVKGHLYPVSVYYSNDPVVNYV 402
R L++I+SSAT+DAE F+ ++ + N A I+SV+G +PV+V+++ V +Y
Sbjct: 221 RNDLRIIVSSATLDAELFKDFFEMNETGNSDKDTAGIISVEGRTHPVAVHHTKTSVPDYC 280
Query: 403 QGVVDTAIKIHESMPVGDILAFVIGLEQIEHIIGILKQYHNQREDL-KLLILPMHGSLPN 461
Q VDT I IH+ GDIL F+ G +++E + L++ ++ +L ++P +G+LP
Sbjct: 281 QSAVDTVINIHKHENPGDILVFLTGQDEVEDVCEKLRELAGNLKNCDRLWVVPCYGALPA 340
Query: 462 NEQIKVFRPTPRAMRKIVIATNIAETSITIPGIVYVIDPGFVKARWFNPNTLTNSLVVVP 521
EQ+K F TP RK+V+ATNIAE SITIPGI YVID G+VK R + +L+ V
Sbjct: 341 REQMKAFDSTPHGTRKVVVATNIAEASITIPGICYVIDTGYVKLRAQHAANGVETLMRVT 400
Query: 522 ISKASAVQRAGRAGRVRSGHVYR 544
+SKASA QRAGRAGR+R G YR
Sbjct: 401 VSKASAEQRAGRAGRIRPGKCYR 423
Score = 144 bits (362), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 65/109 (59%), Positives = 89/109 (81%), Gaps = 1/109 (0%)
Query: 587 QYLLEAGWCYDTKLIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTK 646
Q+LLEAGW D + I IT+PRR++V +LA RV+EE LGH VGYT+RFDD + +D TK
Sbjct: 112 QFLLEAGWAADGRQIVITQPRRVAVVTLATRVAEEKDCILGHDVGYTVRFDDVSDKD-TK 170
Query: 647 IKYMTEGILMREMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKILK 695
+K+MT+G+L+RE++ DPLL KYS+IM+DE HER+ TDIL+GLL+KI++
Sbjct: 171 VKFMTDGLLLREILADPLLSKYSIIMIDEAHERSCNTDILLGLLRKIIQ 219
Score = 109 bits (272), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 57/160 (35%), Positives = 97/160 (60%), Gaps = 6/160 (3%)
Query: 697 KERDFECSDEIASILSLLQVQDIFIKPSSGALSLKARVLRRNFEVEQGDLLTLLNIFKFY 756
K +F CS E+ +I++++Q+QD+FI P +A V+R+ F VE+GD +T+LN+F +
Sbjct: 517 KSAEFGCSTEMVTIVAMMQIQDVFITPYR--QRHQADVIRKKFAVEEGDHMTMLNVFTKF 574
Query: 757 EKQENKKQFCHKYFFNYKVLKRAAELKNQMILLLKKSSIPLVTSPRNTNA---VLKCLTN 813
+ K++C +F NY+ L RA +++Q++ LLK+ I V+S N + +CL
Sbjct: 575 VENGRSKKWCSDHFVNYRGLMRADNVRSQLVRLLKRFEIEKVSSRGLINCSENIRQCLVT 634
Query: 814 GFFSNAAYLHYSGVYRTVRGNEDLYIHP-SSVLYTLQQPQ 852
GFFS AA HY+G Y TV+ + ++ SS+++ P+
Sbjct: 635 GFFSQAAQYHYTGKYMTVKESFPFNMYKGSSIMFKKDYPK 674
Score = 107 bits (267), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 51/100 (51%), Positives = 68/100 (68%)
Query: 43 KFSRLYTEASFSQLNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRVAL 102
K RLY E+ F + E T PE+QR +++S +LQLKALG+ N+ RF + SPPP+ + L
Sbjct: 420 KCYRLYPESEFERFAEGTVPEIQRCQMASTILQLKALGVQNVHRFHYLSPPPSWAMINGL 479
Query: 103 ELLYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLLSSG 142
ELLY+LGA+D LT P+G MAE PL P+H+K LL S
Sbjct: 480 ELLYALGAIDETSQLTSPLGLQMAEFPLPPMHSKCLLKSA 519
Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 30/43 (69%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILMECSRK 43
MT+G+L+ DP + KYS+IM+D+ HER+ TDIL+ RK
Sbjct: 174 MTDGLLLREILADPLLSKYSIIMIDEAHERSCNTDILLGLLRK 216
>sp|A2A4P0|DHX8_MOUSE ATP-dependent RNA helicase DHX8 OS=Mus musculus GN=Dhx8 PE=2 SV=1
Length = 1244
Score = 175 bits (444), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 94/221 (42%), Positives = 138/221 (62%), Gaps = 9/221 (4%)
Query: 347 KRTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYYSNDPVVNYVQGVV 406
KR +KLI++SAT+DA + Q++ A I ++ G YPV + Y+ +P +Y+ +
Sbjct: 731 KRQDMKLIVTSATLDAVKFSQYF-----YEAPIFTIPGRTYPVEILYTKEPETDYLDASL 785
Query: 407 DTAIKIHESMPVGDILAFVIGLEQIEHIIGIL-KQYHNQREDL-KLLILPMHGSLPNNEQ 464
T ++IH + P GDIL F+ G E+I+ IL ++ + D+ +L+ILP++ +LP+ Q
Sbjct: 786 ITVMQIHLTEPPGDILVFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQ 845
Query: 465 IKVFRPTPRAMRKIVIATNIAETSITIPGIVYVIDPGFVKARWFNPNTLTNSLVVVPISK 524
++F P P RK+VIATNIAETS+TI GI YV+DPGFVK + +N T + LVV PIS+
Sbjct: 846 TRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQ 905
Query: 525 ASAVQRAGRAGRVRSGHVYRKNFMYNRLFIHFCVSRNIPTI 565
A A QRAGRAGR G YR R + ++ N+P I
Sbjct: 906 AQAKQRAGRAGRTGPGKCYR--LYTERAYRDEMLTTNVPEI 944
Score = 130 bits (327), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 64/112 (57%), Positives = 84/112 (75%), Gaps = 2/112 (1%)
Query: 587 QYLLEAGWCYDTKLIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTK 646
QYL EAG+ K IG T+PRR++ S+A RVSEE LG VGYTIRF+DCT+ + T
Sbjct: 624 QYLAEAGYTSRGK-IGCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPE-TV 681
Query: 647 IKYMTEGILMREMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKILKDKE 698
IKYMT+G+L+RE + DP L +Y++IMLDE HERTI TD+L GLLKK ++ ++
Sbjct: 682 IKYMTDGMLLRECLIDPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQ 733
Score = 92.0 bits (227), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 87/148 (58%), Gaps = 4/148 (2%)
Query: 703 CSDEIASILSLLQVQDIFIKPSSG-ALSLKARVLRRNFEVEQGDLLTLLNIFKFYEKQEN 761
CS+E+ +I+S+L VQ++F +P AL+ + + F +GD LTLL ++ ++ +
Sbjct: 1025 CSEEMLTIVSMLSVQNVFYRPKDKQALADQKKA---KFHQTEGDHLTLLAVYNSWKNNKF 1081
Query: 762 KKQFCHKYFFNYKVLKRAAELKNQMILLLKKSSIPLVTSPRNTNAVLKCLTNGFFSNAAY 821
+C++ F + L+RA +++ QM+ ++ + + +V+ ++T V K + +GFF NAA
Sbjct: 1082 SNPWCYENFIQARSLRRAQDIRKQMLGIMDRHKLDVVSCGKSTVRVQKAICSGFFRNAAK 1141
Query: 822 LHYSGVYRTVRGNEDLYIHPSSVLYTLQ 849
YRT+ + +YIHPSS L+ Q
Sbjct: 1142 KDPQEGYRTLIDQQVVYIHPSSALFNRQ 1169
Score = 85.5 bits (210), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/100 (47%), Positives = 66/100 (66%), Gaps = 2/100 (2%)
Query: 43 KFSRLYTEASF-SQLNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRVA 101
K RLYTE ++ ++ PE+QRT L+S VL LKA+GI+++L F F PP + L A
Sbjct: 922 KCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPMETLITA 981
Query: 102 LELLYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLLSS 141
+E LY+LGA+D G LT+ +G MAE PL P+ K+L+ S
Sbjct: 982 MEQLYTLGALDDEGLLTR-LGRRMAEFPLEPMLCKMLIMS 1020
Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 28/37 (75%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDIL 37
MT+G+L+ DP + +Y++IMLD+ HERTI TD+L
Sbjct: 685 MTDGMLLRECLIDPDLTQYAIIMLDEAHERTIHTDVL 721
>sp|Q09530|MOG5_CAEEL Probable pre-mRNA-splicing factor ATP-dependent RNA helicase mog-5
OS=Caenorhabditis elegans GN=mog-5 PE=1 SV=1
Length = 1200
Score = 174 bits (442), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 88/200 (44%), Positives = 135/200 (67%), Gaps = 7/200 (3%)
Query: 347 KRTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYYSNDPVVNYVQGVV 406
KR +LKLII+SAT+D+ + +++ A I ++ G +PV + Y+ +P +Y++
Sbjct: 682 KRPELKLIITSATLDSVKFSEYF-----LEAPIFTIPGRTFPVEILYTREPESDYLEAAH 736
Query: 407 DTAIKIHESMPVGDILAFVIGLEQIEHIIGIL-KQYHNQREDL-KLLILPMHGSLPNNEQ 464
T ++IH + P GD+L F+ G E+I+ +L ++ + D+ +L+ILP++G+LP+ Q
Sbjct: 737 ITVMQIHLTEPPGDVLVFLTGQEEIDTSCEVLYERMKSMGPDVPELIILPVYGALPSEMQ 796
Query: 465 IKVFRPTPRAMRKIVIATNIAETSITIPGIVYVIDPGFVKARWFNPNTLTNSLVVVPISK 524
++F P P RK+VIATNIAETS+TI GI YV+DPGFVK + +NP + +SLVV PIS+
Sbjct: 797 TRIFDPAPAGKRKVVIATNIAETSLTIDGIFYVVDPGFVKQKIYNPKSGMDSLVVTPISQ 856
Query: 525 ASAVQRAGRAGRVRSGHVYR 544
A+A QR+GRAGR G YR
Sbjct: 857 AAAKQRSGRAGRTGPGKCYR 876
Score = 124 bits (311), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 63/105 (60%), Positives = 78/105 (74%), Gaps = 2/105 (1%)
Query: 587 QYLLEAGWCYDTKLIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTK 646
QY +EAG K IG T+PRR++ S+A RV+EE LG VGYTIRF+DCT++D T
Sbjct: 575 QYAIEAGLGRRGK-IGCTQPRRVAAMSVAKRVAEEYGCKLGTDVGYTIRFEDCTSQD-TI 632
Query: 647 IKYMTEGILMREMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLK 691
IKYMT+G+L+RE + DP L YS+IMLDE HERTI TD+L GLLK
Sbjct: 633 IKYMTDGMLLRECLIDPDLSGYSLIMLDEAHERTIHTDVLFGLLK 677
Score = 94.0 bits (232), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 87/153 (56%), Gaps = 3/153 (1%)
Query: 700 DFECSDEIASILSLLQVQDIFIKPSSGALSLKARVLRRNFEVEQGDLLTLLNIFKFYEKQ 759
D CS+E+ +I+++L VQ+IF +P + + F +GD LTLL ++ ++
Sbjct: 973 DLGCSEEVLTIVAMLNVQNIFYRPKEKQDHADQK--KAKFHQPEGDHLTLLAVYNSWKNH 1030
Query: 760 ENKKQFCHKYFFNYKVLKRAAELKNQMILLLKKSSIPLVTSPRNTNAVLKCLTNGFFSNA 819
+ +C + F + +KRA +++ Q++ ++ + + +V+ R+ + V K + +GFF NA
Sbjct: 1031 HFSQPWCFENFIQVRSMKRAQDIRKQLLGIMDRHKLLMVSCGRDVSRVQKAICSGFFRNA 1090
Query: 820 AYLHYSGVYRTVRGNEDLYIHPSSVLYTLQQPQ 852
A YRT+ +++YIHPSS + QQP+
Sbjct: 1091 AKRDPQEGYRTLTDGQNVYIHPSSACFQ-QQPE 1122
Score = 85.1 bits (209), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/143 (39%), Positives = 80/143 (55%), Gaps = 12/143 (8%)
Query: 43 KFSRLYTEASFSQLNECTP-PEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRVA 101
K RLYTE +F TP PE+QRT L+S +LQLKA+GI+N++ F F PP ++ A
Sbjct: 873 KCYRLYTERAFRDEMLPTPVPEIQRTNLASTLLQLKAMGINNLIDFDFMDAPPLDSMITA 932
Query: 102 LELLYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLLSSGSVLDSA----------VEI 151
L L++L A+D +G LTK +G MAE PL P +K+L+ S + S V+
Sbjct: 933 LNTLHTLSALDGDGLLTK-LGRRMAEFPLEPSLSKLLIMSVDLGCSEEVLTIVAMLNVQN 991
Query: 152 LLHRLRGLCDNVDSGPETFHDHE 174
+ +R + D+ D FH E
Sbjct: 992 IFYRPKEKQDHADQKKAKFHQPE 1014
Score = 43.9 bits (102), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 30/46 (65%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILMECSRKFSR 46
MT+G+L+ DP + YS+IMLD+ HERTI TD+L + +R
Sbjct: 636 MTDGMLLRECLIDPDLSGYSLIMLDEAHERTIHTDVLFGLLKAAAR 681
>sp|O42643|PRP22_SCHPO Pre-mRNA-splicing factor ATP-dependent RNA helicase prp22
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=prp22 PE=1 SV=1
Length = 1168
Score = 173 bits (439), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 110/291 (37%), Positives = 157/291 (53%), Gaps = 13/291 (4%)
Query: 257 VACSCTVVEFLTEMGCRMDFEYISRGYMFRKGRMKILVSKIFKMSQGK-PSDSGVEPISQ 315
VA E+GCR+ E GY R +++I M+ G + V+P+
Sbjct: 567 VAAMSVAKRVAEEVGCRVGEEV---GYTIRFEDKTSRMTQIKYMTDGMLQRECLVDPLLS 623
Query: 316 SYLVELSILAPGGQDVIGEDMKAFAEQLKPLKRTQLKLIISSATVDAEEICQFYNISASS 375
Y V IL + + D+ + LKR LKLI++SAT+DAE ++
Sbjct: 624 KYSV--IILDEAHERTVATDVLFGLLKGTVLKRPDLKLIVTSATLDAERFSSYF-----Y 676
Query: 376 NATILSVKGHLYPVSVYYSNDPVVNYVQGVVDTAIKIHESMPVGDILAFVIGLEQIEHII 435
I ++ G YPV + Y+ P +Y+ + T ++IH S GDIL F+ G E+I+
Sbjct: 677 KCPIFTIPGRSYPVEIMYTKQPEADYLDAALMTVMQIHLSEGPGDILVFLTGQEEIDTSC 736
Query: 436 GILKQYHNQREDL--KLLILPMHGSLPNNEQIKVFRPTPRAMRKIVIATNIAETSITIPG 493
IL + D +L+ILP++ +LP+ Q ++F P P RK+VIATNIAETS+TI G
Sbjct: 737 EILYERSKMLGDSIPELVILPVYSALPSEIQSRIFEPAPPGGRKVVIATNIAETSLTIDG 796
Query: 494 IVYVIDPGFVKARWFNPNTLTNSLVVVPISKASAVQRAGRAGRVRSGHVYR 544
I YV+DPGFVK F+P +SL+V PIS+A A QR+GRAGR G YR
Sbjct: 797 IYYVVDPGFVKQSCFDPKLGMDSLIVTPISQAQARQRSGRAGRTGPGKCYR 847
Score = 132 bits (333), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 62/105 (59%), Positives = 82/105 (78%), Gaps = 1/105 (0%)
Query: 587 QYLLEAGWCYDTKLIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTK 646
QYL E G+ D+K+IG T+PRR++ S+A RV+EE+ +G VGYTIRF+D T+ +T+
Sbjct: 545 QYLAEEGYTSDSKMIGCTQPRRVAAMSVAKRVAEEVGCRVGEEVGYTIRFEDKTSR-MTQ 603
Query: 647 IKYMTEGILMREMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLK 691
IKYMT+G+L RE + DPLL KYSVI+LDE HERT+ TD+L GLLK
Sbjct: 604 IKYMTDGMLQRECLVDPLLSKYSVIILDEAHERTVATDVLFGLLK 648
Score = 89.4 bits (220), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/102 (48%), Positives = 68/102 (66%), Gaps = 6/102 (5%)
Query: 43 KFSRLYTEASFSQLNECTP---PEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLR 99
K RLYTE+++ NE P PE+QR LS +L LKA+GI+++L F F PPPAQ +
Sbjct: 844 KCYRLYTESAYR--NEMLPSPIPEIQRQNLSHTILMLKAMGINDLLNFDFMDPPPAQTMI 901
Query: 100 VALELLYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLLSS 141
AL+ LY+L A+D G LT P+G MA+ P+ P +KVL++S
Sbjct: 902 AALQNLYALSALDDEGLLT-PLGRKMADFPMEPQLSKVLITS 942
Score = 89.0 bits (219), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 99/190 (52%), Gaps = 17/190 (8%)
Query: 658 EMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKILKDKERDFECSDEIASILSLLQVQ 717
E + PL RK + ++ + + T + +G CS+E+ SI+++L V
Sbjct: 916 EGLLTPLGRKMADFPMEPQLSKVLITSVELG--------------CSEEMLSIIAMLSVP 961
Query: 718 DIFIKPSSGALSLKARVLRRNFEVEQGDLLTLLNIFKFYEKQENKKQFCHKYFFNYKVLK 777
+I+ +P +A R F + D LTLLN++ ++ +C++++ + ++
Sbjct: 962 NIWSRPREK--QQEADRQRAQFANPESDHLTLLNVYTTWKMNRCSDNWCYEHYIQARGMR 1019
Query: 778 RAAELKNQMILLLKKSSIPLVTSPRNTNAVLKCLTNGFFSNAAYL-HYSGVYRTVRGNED 836
RA +++ Q+I L+ + P+V+ R +L+ L +G+F+N A + G Y+T+ N
Sbjct: 1020 RAEDVRKQLIRLMDRYRHPVVSCGRKRELILRALCSGYFTNVAKRDSHEGCYKTIVENAP 1079
Query: 837 LYIHPSSVLY 846
+Y+HPS VL+
Sbjct: 1080 VYMHPSGVLF 1089
Score = 42.4 bits (98), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 27/37 (72%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDIL 37
MT+G+L DP + KYSVI+LD+ HERT+ TD+L
Sbjct: 607 MTDGMLQRECLVDPLLSKYSVIILDEAHERTVATDVL 643
>sp|P53131|PRP43_YEAST Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP43
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=PRP43 PE=1 SV=1
Length = 767
Score = 172 bits (436), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 93/207 (44%), Positives = 134/207 (64%), Gaps = 14/207 (6%)
Query: 347 KRTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYYSNDPVVNYVQGVV 406
+R LK+II SAT+DAE+ +++N +A +L+V G YPV +YY+ + +Y+ +
Sbjct: 237 RRPDLKIIIMSATLDAEKFQRYFN-----DAPLLAVPGRTYPVELYYTPEFQRDYLDSAI 291
Query: 407 DTAIKIHESMPVGDILAFVIGLEQIEHIIGILKQYHNQ--REDL--KLLILPMHGSLPNN 462
T ++IH + GDIL F+ G ++IE + + +Q RE+ L + P++GSLP +
Sbjct: 292 RTVLQIHATEEAGDILLFLTGEDEIEDAVRKISLEGDQLVREEGCGPLSVYPLYGSLPPH 351
Query: 463 EQIKVFRPTP-----RAMRKIVIATNIAETSITIPGIVYVIDPGFVKARWFNPNTLTNSL 517
+Q ++F P P R RK+VI+TNIAETS+TI GIVYV+DPGF K + +NP SL
Sbjct: 352 QQQRIFEPAPESHNGRPGRKVVISTNIAETSLTIDGIVYVVDPGFSKQKVYNPRIRVESL 411
Query: 518 VVVPISKASAVQRAGRAGRVRSGHVYR 544
+V PISKASA QRAGRAGR R G +R
Sbjct: 412 LVSPISKASAQQRAGRAGRTRPGKCFR 438
Score = 108 bits (269), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 51/95 (53%), Positives = 73/95 (76%), Gaps = 1/95 (1%)
Query: 601 IGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTKIKYMTEGILMREMM 660
+ T+PRR++ S+A RV+EE+ LG VGY+IRF++ T+ + T +KYMT+G+L+RE M
Sbjct: 143 VACTQPRRVAAMSVAQRVAEEMDVKLGEEVGYSIRFENKTS-NKTILKYMTDGMLLREAM 201
Query: 661 TDPLLRKYSVIMLDEVHERTIFTDILMGLLKKILK 695
D L +YS I+LDE HERT+ TDILMGLLK+++K
Sbjct: 202 EDHDLSRYSCIILDEAHERTLATDILMGLLKQVVK 236
Score = 82.8 bits (203), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 89/156 (57%), Gaps = 13/156 (8%)
Query: 700 DFECSDEIASILSLLQVQDIFIKPSSGALSLKARVLRRNFEVEQGDLLTLLNIFKFYEKQ 759
+F+CS EI +I+++L V ++FI+P+ +A + F GD +TLLN++ ++
Sbjct: 535 EFQCSQEILTIVAMLSVPNVFIRPTKD--KKRADDAKNIFAHPDGDHITLLNVYHAFKSD 592
Query: 760 ENKK----QFCHKYFFNYKVLKRAAELKNQMILLLKKSSIPLVT----SPRNTNAVLKCL 811
E + ++C ++ NY+ L A +++Q+ L+ + ++ L T SP+ + + K L
Sbjct: 593 EAYEYGIHKWCRDHYLNYRSLSAADNIRSQLERLMNRYNLELNTTDYESPKYFDNIRKAL 652
Query: 812 TNGFFSNAAYLHYSGV--YRTVRGNEDLYIHPSSVL 845
+GFF A SG Y TV+ N+D+ IHPS+VL
Sbjct: 653 ASGFFMQVAK-KRSGAKGYITVKDNQDVLIHPSTVL 687
Score = 74.7 bits (182), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 61/97 (62%), Gaps = 2/97 (2%)
Query: 46 RLYTEASFS-QLNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRVALEL 104
RLYTE +F +L E + PE+ R+ LSS VL+LK LGI +++ F F PP + + ALE
Sbjct: 438 RLYTEEAFQKELIEQSYPEILRSNLSSTVLELKKLGIDDLVHFDFMDPPAPETMMRALEE 497
Query: 105 LYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLLSS 141
L L +D GNLT P+G ++ PL P+ A +L+ S
Sbjct: 498 LNYLACLDDEGNLT-PLGRLASQFPLDPMLAVMLIGS 533
Score = 43.5 bits (101), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 48/109 (44%), Gaps = 31/109 (28%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILMEC-------------------- 40
MT+G+L+ D + +YS I+LD+ HERT+ TDILM
Sbjct: 191 MTDGMLLREAMEDHDLSRYSCIILDEAHERTLATDILMGLLKQVVKRRPDLKIIIMSATL 250
Query: 41 -SRKFSRLYTEASFSQLNECT-------PPEMQRTELSSA---VLQLKA 78
+ KF R + +A + T PE QR L SA VLQ+ A
Sbjct: 251 DAEKFQRYFNDAPLLAVPGRTYPVELYYTPEFQRDYLDSAIRTVLQIHA 299
>sp|P20095|PRP2_YEAST Pre-mRNA-splicing factor ATP-dependent RNA helicase-like protein
PRP2 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=PRP2 PE=1 SV=1
Length = 876
Score = 172 bits (436), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 90/202 (44%), Positives = 132/202 (65%), Gaps = 10/202 (4%)
Query: 347 KRTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYYSNDPVVNYVQGVV 406
+R LKL+ISSAT++A++ +F++ N I +V G YPV ++Y+ P NY+ +
Sbjct: 368 QRPTLKLLISSATMNAKKFSEFFD-----NCPIFNVPGRRYPVDIHYTLQPEANYIHAAI 422
Query: 407 DTAIKIH--ESMPVGDILAFVIGLEQIEHIIGILKQYHNQ--REDLKLLILPMHGSLPNN 462
T +IH +S+P GDIL F+ G E+IE L++ ++ +++I P++ +LP
Sbjct: 423 TTIFQIHTTQSLP-GDILVFLTGQEEIERTKTKLEEIMSKLGSRTKQMIITPIYANLPQE 481
Query: 463 EQIKVFRPTPRAMRKIVIATNIAETSITIPGIVYVIDPGFVKARWFNPNTLTNSLVVVPI 522
+Q+K+F+PTP RK+V+ATNIAETS+TI GI YVIDPGFVK + P+T L+ VP
Sbjct: 482 QQLKIFQPTPENCRKVVLATNIAETSLTIDGIRYVIDPGFVKENSYVPSTGMTQLLTVPC 541
Query: 523 SKASAVQRAGRAGRVRSGHVYR 544
S+AS QRAGRAGRV G +R
Sbjct: 542 SRASVDQRAGRAGRVGPGKCFR 563
Score = 127 bits (318), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 63/109 (57%), Positives = 82/109 (75%), Gaps = 1/109 (0%)
Query: 587 QYLLEAGWCYDTKL-IGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVT 645
QYL+E G+ KL I IT+PRR++ TS+A RV++E+ LG VGY IRF+D TT + T
Sbjct: 258 QYLVEDGFTDQGKLQIAITQPRRVAATSVAARVADEMNVVLGKEVGYQIRFEDKTTPNKT 317
Query: 646 KIKYMTEGILMREMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKIL 694
+KYMT+G+L+RE +TD L KYS IM+DE HERT+ TDIL+GLLK IL
Sbjct: 318 VLKYMTDGMLLREFLTDSKLSKYSCIMIDEAHERTLATDILIGLLKDIL 366
Score = 66.6 bits (161), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 60/99 (60%), Gaps = 2/99 (2%)
Query: 46 RLYTEASFSQLNECTP-PEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRVALEL 104
R++T+ S+ E P PE+ RT LS+ VL L +LG+ ++++F P LR +LE
Sbjct: 563 RIFTKWSYLHELELMPKPEITRTNLSNTVLLLLSLGVTDLIKFPLMDKPSIPTLRKSLEN 622
Query: 105 LYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLLSSGS 143
LY LGA++ G +T+ +G+ M E P P AKVL ++ +
Sbjct: 623 LYILGALNSKGTITR-LGKMMCEFPCEPEFAKVLYTAAT 660
Score = 42.0 bits (97), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 27/38 (71%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILM 38
MT+G+L+ D + KYS IM+D+ HERT+ TDIL+
Sbjct: 322 MTDGMLLREFLTDSKLSKYSCIMIDEAHERTLATDILI 359
>sp|O42945|DHX15_SCHPO Probable pre-mRNA-splicing factor ATP-dependent RNA helicase prp43
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=prp43 PE=3 SV=1
Length = 735
Score = 171 bits (433), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 92/210 (43%), Positives = 133/210 (63%), Gaps = 20/210 (9%)
Query: 347 KRTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYYSNDPVVNYVQGVV 406
+R LK+I+ SAT+DA++ +++ +A +L+V G YPV +YY+ +P +Y++ +
Sbjct: 219 RRPDLKIIVMSATLDAKKFQKYF-----FDAPLLAVPGRTYPVEIYYTQEPERDYLEAAL 273
Query: 407 DTAIKIHESMPVGDILAFVIGLEQIEHIIGILKQYHNQREDL-------KLLILPMHGSL 459
T ++IH GDIL F+ G E+IE ++ + +DL L + P++GSL
Sbjct: 274 RTVLQIHVEEGPGDILVFLTGEEEIEDAC---RKITLEADDLVREGAAGPLKVYPLYGSL 330
Query: 460 PNNEQIKVFRPTPRAM-----RKIVIATNIAETSITIPGIVYVIDPGFVKARWFNPNTLT 514
P N+Q ++F PTP RK+VI+TNIAETS+TI GIVYV+DPGF K + +NP
Sbjct: 331 PPNQQQRIFEPTPEDTKSGYGRKVVISTNIAETSLTIDGIVYVVDPGFSKQKIYNPRIRV 390
Query: 515 NSLVVVPISKASAVQRAGRAGRVRSGHVYR 544
SL+V PISKASA QRAGRAGR R G +R
Sbjct: 391 ESLLVSPISKASAQQRAGRAGRTRPGKCFR 420
Score = 112 bits (280), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 51/93 (54%), Positives = 72/93 (77%), Gaps = 1/93 (1%)
Query: 601 IGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTKIKYMTEGILMREMM 660
I T+PRR++ S+A RV++E+ LG VGY IRF+DC+ + T +KYMT+G+L+RE M
Sbjct: 125 IACTQPRRVAAMSVAKRVADEMDVDLGEEVGYNIRFEDCSGPN-TLLKYMTDGMLLREAM 183
Query: 661 TDPLLRKYSVIMLDEVHERTIFTDILMGLLKKI 693
TD +L +YS I+LDE HERT+ TDILMGL+K++
Sbjct: 184 TDHMLSRYSCIILDEAHERTLATDILMGLMKRL 216
Score = 78.2 bits (191), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 85/151 (56%), Gaps = 7/151 (4%)
Query: 700 DFECSDEIASILSLLQVQDIFIKPSSGALSLKARVLRRNFEVEQGDLLTLLNIFKFYEKQ 759
+F CS+E+ S+ +LL V ++F++P+S A L A +R+ F GD LTLLN++ Y+
Sbjct: 517 EFYCSNEVLSLTALLSVPNVFVRPNS-ARKL-ADEMRQQFTHPDGDHLTLLNVYHAYKSG 574
Query: 760 ENKKQFCHKYFFNYKVLKRAAELKNQMILLLKKSSIPLVTSPRNTN----AVLKCLTNGF 815
E +C +F +++ L A ++ Q+ +++ + L+++P + + + L +GF
Sbjct: 575 EGTADWCWNHFLSHRALISADNVRKQLRRTMERQEVELISTPFDDKNYYVNIRRALVSGF 634
Query: 816 FSNAAYLHYSGV-YRTVRGNEDLYIHPSSVL 845
F A +G Y T++ N+ + +HPS L
Sbjct: 635 FMQVAKKSANGKNYVTMKDNQVVSLHPSCGL 665
Score = 75.1 bits (183), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/97 (45%), Positives = 61/97 (62%), Gaps = 2/97 (2%)
Query: 46 RLYTEASF-SQLNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRVALEL 104
RLYTE +F +L E T PE+ R+ LSS VL+LK LGI +++ F + PP + + ALE
Sbjct: 420 RLYTEEAFRKELIEQTYPEILRSNLSSTVLELKKLGIDDLVHFDYMDPPAPETMMRALEE 479
Query: 105 LYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLLSS 141
L L +D NG+LT P+G +E PL P A +L+ S
Sbjct: 480 LNYLNCLDDNGDLT-PLGRKASEFPLDPNLAVMLIRS 515
Score = 42.0 bits (97), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 30/45 (66%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILMECSRKFS 45
MT+G+L+ D + +YS I+LD+ HERT+ TDILM ++ +
Sbjct: 173 MTDGMLLREAMTDHMLSRYSCIILDEAHERTLATDILMGLMKRLA 217
>sp|Q9HE06|YK99_SCHPO Putative pre-mRNA-splicing factor ATP-dependent RNA helicase
C20H4.09 OS=Schizosaccharomyces pombe (strain 972 / ATCC
24843) GN=SPAC20H4.09 PE=3 SV=1
Length = 647
Score = 171 bits (433), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 89/200 (44%), Positives = 127/200 (63%), Gaps = 5/200 (2%)
Query: 347 KRTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYYSNDPVVNYVQGVV 406
KR +L++SSA+VDA ++ QF+ +S++G L+PV + P NYV +
Sbjct: 168 KRNDFRLVLSSASVDANKLSQFF---GQDKVCTMSIEGKLFPVETLFLQKPTENYVDSAI 224
Query: 407 DTAIKIHESMPVGDILAFVIGLEQIEHIIG-ILKQYHNQREDLKLLI-LPMHGSLPNNEQ 464
+T I I+ + P GDIL F+ G ++IE+ I I + ED + L+ LP+H L +EQ
Sbjct: 225 ETVININSTYPPGDILVFLSGRKEIEYCIKKIEDSLIHASEDCQTLVPLPLHAGLTVDEQ 284
Query: 465 IKVFRPTPRAMRKIVIATNIAETSITIPGIVYVIDPGFVKARWFNPNTLTNSLVVVPISK 524
++VF RK++ +TNIAETSITI GIVYV+D GF K R +NP T T+ L+ VPISK
Sbjct: 285 MRVFNIYDGDFRKVIFSTNIAETSITIDGIVYVVDSGFNKQRIYNPYTRTSKLINVPISK 344
Query: 525 ASAVQRAGRAGRVRSGHVYR 544
+SA+QR+GRAGR G V+R
Sbjct: 345 SSAIQRSGRAGRTMRGKVFR 364
Score = 126 bits (316), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 63/124 (50%), Positives = 87/124 (70%), Gaps = 2/124 (1%)
Query: 587 QYLLEAGWCYDTKLIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTK 646
Q+L EAGW +IG T+PRR+ S++ RVS EL + G GY+I+FD +E TK
Sbjct: 60 QFLYEAGWASQNGIIGCTQPRRLVAKSVSERVSLELNSPPGSLCGYSIQFDHNVSEK-TK 118
Query: 647 IKYMTEGILMREMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKILKDKERDFECSDE 706
IKYMT+GIL+ E+ DPLL +YS+++LDEVHERT+ TD+L+G+LK+IL +K DF
Sbjct: 119 IKYMTDGILLNEIFFDPLLERYSIVILDEVHERTLSTDLLLGVLKRIL-EKRNDFRLVLS 177
Query: 707 IASI 710
AS+
Sbjct: 178 SASV 181
Score = 97.4 bits (241), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 103/196 (52%), Gaps = 22/196 (11%)
Query: 660 MTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKILKDKERDFECSDEIASILSLLQVQDI 719
+TDPL + S LD + + T F C+ EI SI S+L ++
Sbjct: 435 LTDPLGIQISNSFLDANISKALLT--------------SNQFGCTHEILSIASILTAGEV 480
Query: 720 FIKPSSGALSLKARVLRRNFEVEQGDLLTLLNIFKFYEKQENKKQFCHKYFFNYKVLKRA 779
F P+S + + A V +F +GD++T LN+F+ + + Q+C K + NY+ L++A
Sbjct: 481 FYNPTSSSKN-DAFVAHSSFFANEGDIITALNVFESFVGNKKDLQWCRKNYLNYQTLRQA 539
Query: 780 AELKNQMILLLKKSSIPLVTSPR----NTNAVLKCLTNGFFSNAAYLHYSGVYRTVRGNE 835
+++ ++ L K SIP T+ R + + +LKCL +GF N A+L G Y+T+ G +
Sbjct: 540 LDIRTHLVRFLNKFSIP--TAQRLPSSDCSKILKCLLDGFVRNVAHLQNDGSYKTI-GGK 596
Query: 836 DLYIHPSSVLYTLQQP 851
+++ SSVL+ + P
Sbjct: 597 QVWLDSSSVLHEKKTP 612
Score = 72.0 bits (175), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/100 (42%), Positives = 59/100 (59%)
Query: 43 KFSRLYTEASFSQLNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRVAL 102
K RLYTE ++S + E ++ ++S VL LK LG+ NIL+F F PP +L AL
Sbjct: 361 KVFRLYTEKAYSLMKEEFEADILNCDMSPLVLFLKGLGLKNILQFPFFVRPPTVHLMAAL 420
Query: 103 ELLYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLLSSG 142
E LY LG +D +GNLT P+G ++ L +K LL+S
Sbjct: 421 EDLYLLGVLDESGNLTDPLGIQISNSFLDANISKALLTSN 460
Score = 48.1 bits (113), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 31/38 (81%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILM 38
MT+GIL+ DP +E+YS+++LD+VHERT+ TD+L+
Sbjct: 122 MTDGILLNEIFFDPLLERYSIVILDEVHERTLSTDLLL 159
>sp|O45244|DHX16_CAEEL Probable pre-mRNA-splicing factor ATP-dependent RNA helicase mog-4
OS=Caenorhabditis elegans GN=mog-4 PE=1 SV=2
Length = 1008
Score = 169 bits (429), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 91/200 (45%), Positives = 129/200 (64%), Gaps = 8/200 (4%)
Query: 348 RTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYYSNDPVVNYVQGVVD 407
R LKL+ISSAT+DAE+ F++ +A I + G +PV +YY+ P +YV +
Sbjct: 508 RKDLKLLISSATLDAEKFSSFFD-----DAPIFRIPGRRFPVDIYYTQAPEADYVDAAIV 562
Query: 408 TAIKIHESMPV-GDILAFVIGLEQIEHII-GILKQYHNQREDLKLLI-LPMHGSLPNNEQ 464
T ++IH + P+ GDIL F+ G E+IE + ++++ +K LI LP++ +LP++ Q
Sbjct: 563 TIMQIHLTQPLPGDILVFLTGQEEIETVQEALMERSKALGSKIKELIPLPVYANLPSDLQ 622
Query: 465 IKVFRPTPRAMRKIVIATNIAETSITIPGIVYVIDPGFVKARWFNPNTLTNSLVVVPISK 524
K+F PTP+ RK+V+ATNIAETS+TI GI YVIDPGF K F+ + L VV ISK
Sbjct: 623 AKIFEPTPKDARKVVLATNIAETSVTIDGINYVIDPGFSKQNSFDARSGVEHLHVVTISK 682
Query: 525 ASAVQRAGRAGRVRSGHVYR 544
A+A QRAGRAGR G +R
Sbjct: 683 AAANQRAGRAGRTGPGKCFR 702
Score = 129 bits (323), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 60/109 (55%), Positives = 82/109 (75%), Gaps = 1/109 (0%)
Query: 587 QYLLEAGWCYDTKLIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTK 646
QYL EAG+C K IG T+PRR++ S+A RV++E+ LG VGY+IRF+DCT+E T
Sbjct: 399 QYLYEAGFCEGGKRIGCTQPRRVAAMSVAARVADEVGCKLGTQVGYSIRFEDCTSEK-TV 457
Query: 647 IKYMTEGILMREMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKILK 695
+KYMT+G+L+RE + +P L YSV+M+DE HERT+ TDIL GL+K I +
Sbjct: 458 LKYMTDGMLLREFLNEPDLASYSVMMIDEAHERTLHTDILFGLVKDIAR 506
Score = 89.7 bits (221), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 46/97 (47%), Positives = 66/97 (68%), Gaps = 2/97 (2%)
Query: 46 RLYTEASFS-QLNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRVALEL 104
RLYT ++ +L E PE+QRT L + VL LK+LGIH+++ F F PPP + L +ALE
Sbjct: 702 RLYTAWAYKHELEEQPIPEIQRTNLGNVVLMLKSLGIHDLVHFDFLDPPPQETLVIALEQ 761
Query: 105 LYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLLSS 141
LY+LGA++ G LTK +G MAE P P +K++++S
Sbjct: 762 LYALGALNHRGELTK-LGRRMAEFPCDPCMSKMIIAS 797
Score = 82.8 bits (203), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 86/147 (58%), Gaps = 4/147 (2%)
Query: 701 FECSDEIASILSLLQVQD-IFIKPSSGALSLKARVLRRNFEVEQGDLLTLLNIFKFYEKQ 759
+ECS+EI +I ++L +F +P A + A R+ F GD +TL+N++ +++
Sbjct: 800 YECSEEIVTIAAMLSCNAAVFYRPK--AQVIHADSARKGFWSPAGDHITLMNVYNKWQES 857
Query: 760 ENKKQFCHKYFFNYKVLKRAAELKNQMILLLKKSSIPLVTSPRNTNAVLKCLTNGFFSNA 819
+++C + + ++ +KRA ++++Q++ LL++ I +S +T + K +T G+F N
Sbjct: 858 SFSQRWCVENYVQHRTMKRARDVRDQLVGLLERVEIETKSST-DTIKIRKAITAGYFYNV 916
Query: 820 AYLHYSGVYRTVRGNEDLYIHPSSVLY 846
+ L +G Y+TV+ + HP+S L+
Sbjct: 917 SKLDNTGHYKTVKHKHTTHPHPNSCLF 943
Score = 43.5 bits (101), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 31/47 (65%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILMECSRKFSRL 47
MT+G+L+ ++P + YSV+M+D+ HERT+ TDIL + +R
Sbjct: 461 MTDGMLLREFLNEPDLASYSVMMIDEAHERTLHTDILFGLVKDIARF 507
>sp|O22899|DHX15_ARATH Probable pre-mRNA-splicing factor ATP-dependent RNA helicase
OS=Arabidopsis thaliana GN=At2g47250 PE=2 SV=1
Length = 729
Score = 166 bits (421), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 90/206 (43%), Positives = 131/206 (63%), Gaps = 14/206 (6%)
Query: 348 RTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYYSNDPVVNYVQGVVD 407
R LKL++ SAT++AE+ +++ S A ++ V G L+PV ++Y+ +P +Y++ +
Sbjct: 214 RPDLKLVVMSATLEAEKFQEYF-----SGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIR 268
Query: 408 TAIKIHESMPVGDILAFVIGLEQIEHII-GILKQYHNQREDLK-LLILPMHGSLPNNEQI 465
T ++IH P GDIL F+ G E+IE I K+ N + + + ++P++ +LP Q
Sbjct: 269 TVVQIHMCEPPGDILVFLTGEEEIEDACRKINKEVSNLGDQVGPVKVVPLYSTLPPAMQQ 328
Query: 466 KVFRPTP-------RAMRKIVIATNIAETSITIPGIVYVIDPGFVKARWFNPNTLTNSLV 518
K+F P P A RKIV++TNIAETS+TI GIVYVIDPGF K + +NP SL+
Sbjct: 329 KIFDPAPVPLTEGGPAGRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRIRVESLL 388
Query: 519 VVPISKASAVQRAGRAGRVRSGHVYR 544
V PISKASA QR+GRAGR R G +R
Sbjct: 389 VSPISKASAHQRSGRAGRTRPGKCFR 414
Score = 120 bits (301), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 51/98 (52%), Positives = 79/98 (80%), Gaps = 1/98 (1%)
Query: 600 LIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTKIKYMTEGILMREM 659
L+G T+PRR++ S++ RV++E+ ++G VGY+IRF+DCT+ T +KY+T+G+L+RE
Sbjct: 118 LVGCTQPRRVAAMSVSRRVADEMDVSIGEEVGYSIRFEDCTSSR-TMLKYLTDGMLLREA 176
Query: 660 MTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKILKDK 697
M DPLL +Y VI+LDE HERT+ TD+L GLLK++L+++
Sbjct: 177 MADPLLERYKVIILDEAHERTLATDVLFGLLKEVLRNR 214
Score = 83.6 bits (205), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 48/97 (49%), Positives = 63/97 (64%), Gaps = 2/97 (2%)
Query: 46 RLYTEASFSQ-LNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRVALEL 104
RLYTE SF+ L T PE+ R+ L++ VL LK LGI +++ F F PP + L ALE+
Sbjct: 414 RLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEV 473
Query: 105 LYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLLSS 141
L LGA+D GNLTK GE M+E PL P +K+L+ S
Sbjct: 474 LNYLGALDDEGNLTK-TGEIMSEFPLDPQMSKMLIVS 509
Score = 82.4 bits (202), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 84/153 (54%), Gaps = 12/153 (7%)
Query: 700 DFECSDEIASILSLLQVQDIFIKP---SSGALSLKARVLRRNFEVEQGDLLTLLNIFKFY 756
+F CS+EI S+ ++L V + F++P A KAR F GD LTLLN++ Y
Sbjct: 511 EFNCSNEILSVSAMLSVPNCFVRPREAQKAADEAKAR-----FGHIDGDHLTLLNVYHAY 565
Query: 757 EKQENKKQFCHKYFFNYKVLKRAAELKNQMILLLKKSSIPLVTSPRNTN----AVLKCLT 812
++ +C + F N + +K A ++ Q++ ++ + ++ + ++ N+ + K +
Sbjct: 566 KQNNEDPNWCFENFVNNRAMKSADNVRQQLVRIMSRFNLKMCSTDFNSRDYYVNIRKAML 625
Query: 813 NGFFSNAAYLHYSGVYRTVRGNEDLYIHPSSVL 845
G+F A+L +G Y TV+ N+ +++HPS+ L
Sbjct: 626 AGYFMQVAHLERTGHYLTVKDNQVVHLHPSNCL 658
Score = 43.5 bits (101), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 28/37 (75%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDIL 37
+T+G+L+ DP +E+Y VI+LD+ HERT+ TD+L
Sbjct: 167 LTDGMLLREAMADPLLERYKVIILDEAHERTLATDVL 203
>sp|Q38953|DHX8_ARATH Probable pre-mRNA-splicing factor ATP-dependent RNA helicase
OS=Arabidopsis thaliana GN=At3g26560 PE=1 SV=2
Length = 1168
Score = 166 bits (420), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 84/200 (42%), Positives = 123/200 (61%), Gaps = 7/200 (3%)
Query: 347 KRTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYYSNDPVVNYVQGVV 406
+R L+LI++SAT+DAE+ ++ N I ++ G +PV + Y+ P +Y+ +
Sbjct: 657 RRLDLRLIVTSATLDAEKFSGYF-----FNCNIFTIPGRTFPVEILYTKQPETDYLDAAL 711
Query: 407 DTAIKIHESMPVGDILAFVIGLEQIEHIIGILKQYHNQ--REDLKLLILPMHGSLPNNEQ 464
T ++IH + P GDIL F+ G E+I+ L + + +L+ILP++ +LP+ Q
Sbjct: 712 ITVLQIHLTEPEGDILVFLTGQEEIDSACQSLYERMKGLGKNVPELIILPVYSALPSEMQ 771
Query: 465 IKVFRPTPRAMRKIVIATNIAETSITIPGIVYVIDPGFVKARWFNPNTLTNSLVVVPISK 524
++F P P RK+V+ATNIAE S+TI GI YV+DPGF K +NP SLV+ PIS+
Sbjct: 772 SRIFDPPPPGKRKVVVATNIAEASLTIDGIYYVVDPGFAKQNVYNPKQGLESLVITPISQ 831
Query: 525 ASAVQRAGRAGRVRSGHVYR 544
ASA QRAGRAGR G YR
Sbjct: 832 ASAKQRAGRAGRTGPGKCYR 851
Score = 129 bits (324), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 65/109 (59%), Positives = 81/109 (74%), Gaps = 2/109 (1%)
Query: 587 QYLLEAGWCYDTKLIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTK 646
QYL EAG+ K IG T+PRR++ S+A RV+EE LG VGY IRF+DCT D T
Sbjct: 550 QYLAEAGYTTKGK-IGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPD-TV 607
Query: 647 IKYMTEGILMREMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKILK 695
IKYMT+G+L+RE++ D L +YSVIMLDE HERTI TD+L GLLKK++K
Sbjct: 608 IKYMTDGMLLREILIDENLSQYSVIMLDEAHERTIHTDVLFGLLKKLMK 656
Score = 92.8 bits (229), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 85/150 (56%), Gaps = 2/150 (1%)
Query: 700 DFECSDEIASILSLLQVQDIFIKPSSGALSLKARVLRRNFEVEQGDLLTLLNIFKFYEKQ 759
D CSDEI ++++++Q +IF +P +A R F +GD LTLL +++ ++ +
Sbjct: 948 DLGCSDEILTMIAMIQTGNIFYRPREK--QAQADQKRAKFFQPEGDHLTLLAVYEAWKAK 1005
Query: 760 ENKKQFCHKYFFNYKVLKRAAELKNQMILLLKKSSIPLVTSPRNTNAVLKCLTNGFFSNA 819
+C + F + L+RA +++ Q++ ++ K + +VT+ +N + K +T GFF +
Sbjct: 1006 NFSGPWCFENFIQSRSLRRAQDVRKQLLSIMDKYKLDVVTAGKNFTKIRKAITAGFFFHG 1065
Query: 820 AYLHYSGVYRTVRGNEDLYIHPSSVLYTLQ 849
A YRT+ N+ +YIHPSS L+ Q
Sbjct: 1066 ARKDPQEGYRTLVENQPVYIHPSSALFQRQ 1095
Score = 85.5 bits (210), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/102 (49%), Positives = 65/102 (63%), Gaps = 6/102 (5%)
Query: 43 KFSRLYTEASFSQLNECTP---PEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLR 99
K RLYTE+++ NE P PE+QR L L +KA+GI+++L F F PP Q L
Sbjct: 848 KCYRLYTESAYR--NEMPPTSIPEIQRINLGMTTLTMKAMGINDLLSFDFMDPPQPQALI 905
Query: 100 VALELLYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLLSS 141
A+E LYSLGA+D G LTK +G MAE PL P +K+LL+S
Sbjct: 906 SAMEQLYSLGALDEEGLLTK-LGRKMAEFPLEPPLSKMLLAS 946
Score = 47.0 bits (110), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 74/176 (42%), Gaps = 45/176 (25%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILMECSRKFSRLYTEASFSQLNECT 60
MT+G+L+ D ++ +YSVIMLD+ HERTI TD+L +K + +
Sbjct: 611 MTDGMLLREILIDENLSQYSVIMLDEAHERTIHTDVLFGLLKKLMKRRLDL--------- 661
Query: 61 PPEMQRTELSSAVLQLKAL-------GIHNILRFSFP------SPPPAQNLRVALELLYS 107
R ++SA L + I I +FP P L AL +
Sbjct: 662 -----RLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPETDYLDAALITVLQ 716
Query: 108 LGAMDVNGNLTKPVGETMAEMPLHPIHAKVLLSSGSVLDSAVEILLHRLRGLCDNV 163
+ +LT+P G+ + V L+ +DSA + L R++GL NV
Sbjct: 717 I-------HLTEPEGDIL-----------VFLTGQEEIDSACQSLYERMKGLGKNV 754
>sp|O17438|DHX15_STRPU Putative pre-mRNA-splicing factor ATP-dependent RNA helicase PRP1
(Fragment) OS=Strongylocentrotus purpuratus GN=PRP1 PE=2
SV=1
Length = 455
Score = 160 bits (405), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 131/478 (27%), Positives = 224/478 (46%), Gaps = 97/478 (20%)
Query: 347 KRTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYYSNDPVVNYVQGVV 406
+R+ LKL++ SAT+DA + +++ NA +++V G +PV ++Y+ +P +Y++ +
Sbjct: 50 QRSDLKLVVMSATLDAGKFQHYFD-----NAPLMTVPGRTHPVEIFYTPEPERDYLEAAI 104
Query: 407 DTAIKIHESMPV-GDILAFVIGLEQIEHIIGILKQYHN----QREDLKLLILPMHGSLPN 461
T ++IH V GD+L F+ G E+IE +K+ + + DLK +P++ +LP
Sbjct: 105 RTVVQIHMCEEVEGDVLLFLTGQEEIEEACKRIKREVDNLGPEVGDLK--TIPLYSTLPP 162
Query: 462 NEQIKVFRPTPRAM------RKIVIATNIAETSITIPGIVYVIDPGFVKARWFNPNTLTN 515
Q ++F P RK+V++TNIAETS+TI G+V+VIDPGF K + +NP
Sbjct: 163 AMQQRIFEHAPPNKANGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVE 222
Query: 516 SLVVVPISKASAVQ--------RAGRAGRVRSGHVYRKNFMYNRLFIHFCVSRNIPTIPN 567
SL+V PISKASA Q R G+ R+ + Y M + + S N+ T+
Sbjct: 223 SLLVSPISKASAQQRVGRAGRTRPGKCFRLYTEKAYDSE-MQDNTYPEILRS-NLGTVVL 280
Query: 568 DPKDVKCDVMFHKVFFSFFQYLLEAGWCYDTKLIGITEPRRISVTSLANRVSEELRTTLG 627
K + D + H F F + E L L
Sbjct: 281 QLKKLGIDDLVH---FDF----------------------------MDPPAPETLMRAL- 308
Query: 628 HTVGYTIRFDDCTTEDVTKIKYMTEGILMREMMTDPLLRKYSVIMLDEVHERTIFTDILM 687
+ Y DD + D+T++ G +M E DP L K +
Sbjct: 309 ELLNYLGALDD--SGDLTRL-----GSMMAEFPLDPQLAKMVI----------------- 344
Query: 688 GLLKKILKDKERDFECSDEIASILSLLQVQDIFIKPSSGA-LSLKARVLRRNFEVEQGDL 746
D+ CS+EI S+ ++L V F++P+ L+ +A++ F GD
Sbjct: 345 ---------ASTDYSCSNEILSVTAMLSVPQCFLRPNEAKKLADEAKM---RFAHIDGDH 392
Query: 747 LTLLNIFKFYEKQENKKQFCHKYFFNYKVLKRAAELKNQMILLLKKSSIPLVTSPRNT 804
LTLLN++ +++ Q+C+ F Y+ LK A ++ Q+ ++ + ++ ++ N+
Sbjct: 393 LTLLNVYHAFKQNNEDPQWCYDNFIQYRSLKSADSVRQQLARIMDRFALQRTSTNFNS 450
Score = 85.1 bits (209), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/100 (47%), Positives = 68/100 (68%), Gaps = 2/100 (2%)
Query: 43 KFSRLYTEASF-SQLNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRVA 101
K RLYTE ++ S++ + T PE+ R+ L + VLQLK LGI +++ F F PP + L A
Sbjct: 248 KCFRLYTEKAYDSEMQDNTYPEILRSNLGTVVLQLKKLGIDDLVHFDFMDPPAPETLMRA 307
Query: 102 LELLYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLLSS 141
LELL LGA+D +G+LT+ +G MAE PL P AK++++S
Sbjct: 308 LELLNYLGALDDSGDLTR-LGSMMAEFPLDPQLAKMVIAS 346
Score = 78.2 bits (191), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/51 (68%), Positives = 44/51 (86%)
Query: 647 IKYMTEGILMREMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKILKDK 697
IKYMT+G+L+RE MTDPLL +Y VI+LDE HERT+ TDILMGLLK++ K +
Sbjct: 1 IKYMTDGMLLREGMTDPLLERYGVILLDEAHERTVATDILMGLLKEVEKQR 51
Score = 48.5 bits (114), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 29/38 (76%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILM 38
MT+G+L+ DP +E+Y VI+LD+ HERT+ TDILM
Sbjct: 4 MTDGMLLREGMTDPLLERYGVILLDEAHERTVATDILM 41
>sp|Q17R09|PRP16_BOVIN Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 OS=Bos
taurus GN=DHX38 PE=2 SV=1
Length = 1227
Score = 157 bits (398), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 81/202 (40%), Positives = 125/202 (61%), Gaps = 12/202 (5%)
Query: 347 KRTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYYSNDPVVNYVQGVV 406
+R+ LKLI++SAT+DAE+ F+ N I + G +PV + +S P +YV+ V
Sbjct: 674 RRSDLKLIVTSATMDAEKFASFFG-----NVPIFHIPGRTFPVDILFSKTPQEDYVEAAV 728
Query: 407 DTAIKIHESMPVGDILAFVIGLEQIE----HIIGILKQYHNQREDLKLLILPMHGSLPNN 462
++++H S GDIL F+ G E IE I+ L++ N L +LP++ LP++
Sbjct: 729 KQSLQVHLSGAPGDILIFMPGQEDIEVTSDQIVEHLEELENA---PALAVLPIYSQLPSD 785
Query: 463 EQIKVFRPTPRAMRKIVIATNIAETSITIPGIVYVIDPGFVKARWFNPNTLTNSLVVVPI 522
Q K+F+ P +RK ++ATNIAETS+T+ GI++VID G+ K + FNP ++L + PI
Sbjct: 786 LQAKIFQKAPDGVRKCIVATNIAETSLTVDGIMFVIDSGYCKLKVFNPRIGMDALQIYPI 845
Query: 523 SKASAVQRAGRAGRVRSGHVYR 544
S+A+A QR+GRAGR G +R
Sbjct: 846 SQANANQRSGRAGRTGPGQCFR 867
Score = 117 bits (294), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 57/108 (52%), Positives = 79/108 (73%), Gaps = 2/108 (1%)
Query: 587 QYLLEAGWCYDTKLIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTK 646
QYL E G+ D +IG T+PRR++ S+A RVSEE+ LG VGY IRF+DCT+E T
Sbjct: 567 QYLHEDGYT-DYGMIGCTQPRRVAAMSVAKRVSEEMGGNLGEEVGYAIRFEDCTSES-TL 624
Query: 647 IKYMTEGILMREMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKIL 694
IKYMT+GIL+RE + + L YS I++DE HER++ TD+L GLL++++
Sbjct: 625 IKYMTDGILLRESLREADLDHYSAIIMDEAHERSLNTDVLFGLLREVV 672
Score = 79.3 bits (194), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/109 (42%), Positives = 70/109 (64%), Gaps = 3/109 (2%)
Query: 46 RLYTEASF-SQLNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRVALEL 104
RLYT++++ ++L T PE+QRT L++ VL LK+LG+ ++L+F F PPP N+ ++
Sbjct: 867 RLYTQSAYKNELLTTTVPEIQRTNLANVVLLLKSLGVQDLLQFHFMDPPPEDNMLNSMYQ 926
Query: 105 LYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLLSSGSVLDSAVEILL 153
L+ LGA+D G LT G M E PL P +K+L+ S + + EILL
Sbjct: 927 LWILGALDNTGGLTS-TGRLMVEFPLDPALSKMLIVSCD-MGCSSEILL 973
Score = 73.6 bits (179), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 76/149 (51%), Gaps = 2/149 (1%)
Query: 700 DFECSDEIASILSLLQVQDIFIKPSSGALSLKARVLRRNFEVEQGDLLTLLNIFKFYEKQ 759
D CS EI I+S+L V IF +P ++ +R F V + D L+ LN++ ++
Sbjct: 964 DMGCSSEILLIVSMLSVPAIFYRPK--GREEESDQIREKFAVPESDHLSYLNVYLQWKNN 1021
Query: 760 ENKKQFCHKYFFNYKVLKRAAELKNQMILLLKKSSIPLVTSPRNTNAVLKCLTNGFFSNA 819
+C+ +F + K +++ E++ Q+ ++ + + L + + + V KC+ +F A
Sbjct: 1022 NYSTIWCNDHFIHAKAMRKVREVRAQLKDIMVQQRMSLASCGTDWDIVRKCICAAYFHQA 1081
Query: 820 AYLHYSGVYRTVRGNEDLYIHPSSVLYTL 848
A L G Y +R ++HP+S L+ +
Sbjct: 1082 AKLKGIGEYVNIRTGMPCHLHPTSSLFGM 1110
Score = 38.1 bits (87), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 26/37 (70%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDIL 37
MT+GIL+ + ++ YS I++D+ HER++ TD+L
Sbjct: 628 MTDGILLRESLREADLDHYSAIIMDEAHERSLNTDVL 664
>sp|Q92620|PRP16_HUMAN Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 OS=Homo
sapiens GN=DHX38 PE=1 SV=2
Length = 1227
Score = 157 bits (397), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 81/202 (40%), Positives = 125/202 (61%), Gaps = 12/202 (5%)
Query: 347 KRTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYYSNDPVVNYVQGVV 406
+R+ LKLI++SAT+DAE+ F+ N I + G +PV + +S P +YV+ V
Sbjct: 674 RRSDLKLIVTSATMDAEKFAAFFG-----NVPIFHIPGRTFPVDILFSKTPQEDYVEAAV 728
Query: 407 DTAIKIHESMPVGDILAFVIGLEQIE----HIIGILKQYHNQREDLKLLILPMHGSLPNN 462
++++H S GDIL F+ G E IE I+ L++ N L +LP++ LP++
Sbjct: 729 KQSLQVHLSGAPGDILIFMPGQEDIEVTSDQIVEHLEELENA---PALAVLPIYSQLPSD 785
Query: 463 EQIKVFRPTPRAMRKIVIATNIAETSITIPGIVYVIDPGFVKARWFNPNTLTNSLVVVPI 522
Q K+F+ P +RK ++ATNIAETS+T+ GI++VID G+ K + FNP ++L + PI
Sbjct: 786 LQAKIFQKAPDGVRKCIVATNIAETSLTVDGIMFVIDSGYCKLKVFNPRIGMDALQIYPI 845
Query: 523 SKASAVQRAGRAGRVRSGHVYR 544
S+A+A QR+GRAGR G +R
Sbjct: 846 SQANANQRSGRAGRTGPGQCFR 867
Score = 118 bits (295), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 57/108 (52%), Positives = 80/108 (74%), Gaps = 2/108 (1%)
Query: 587 QYLLEAGWCYDTKLIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTK 646
QYL E G+ D +IG T+PRR++ S+A RVSEE+ LG VGY IRF+DCT+E+ T
Sbjct: 567 QYLHEDGYT-DYGMIGCTQPRRVAAMSVAKRVSEEMGGNLGEEVGYAIRFEDCTSEN-TL 624
Query: 647 IKYMTEGILMREMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKIL 694
IKYMT+GIL+RE + + L YS I++DE HER++ TD+L GLL++++
Sbjct: 625 IKYMTDGILLRESLREADLDHYSAIIMDEAHERSLNTDVLFGLLREVV 672
Score = 79.7 bits (195), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/109 (42%), Positives = 70/109 (64%), Gaps = 3/109 (2%)
Query: 46 RLYTEASF-SQLNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRVALEL 104
RLYT++++ ++L T PE+QRT L++ VL LK+LG+ ++L+F F PPP N+ ++
Sbjct: 867 RLYTQSAYKNELLTTTVPEIQRTNLANVVLLLKSLGVQDLLQFHFMDPPPEDNMLNSMYQ 926
Query: 105 LYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLLSSGSVLDSAVEILL 153
L+ LGA+D G LT G M E PL P +K+L+ S + + EILL
Sbjct: 927 LWILGALDNTGGLTS-TGRLMVEFPLDPALSKMLIVSCD-MGCSSEILL 973
Score = 75.1 bits (183), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 76/149 (51%), Gaps = 2/149 (1%)
Query: 700 DFECSDEIASILSLLQVQDIFIKPSSGALSLKARVLRRNFEVEQGDLLTLLNIFKFYEKQ 759
D CS EI I+S+L V IF +P ++ +R F V + D LT LN++ ++
Sbjct: 964 DMGCSSEILLIVSMLSVPAIFYRPK--GREEESDQIREKFAVPESDHLTYLNVYLQWKNN 1021
Query: 760 ENKKQFCHKYFFNYKVLKRAAELKNQMILLLKKSSIPLVTSPRNTNAVLKCLTNGFFSNA 819
+C+ +F + K +++ E++ Q+ ++ + + L + + + V KC+ +F A
Sbjct: 1022 NYSTIWCNDHFIHAKAMRKVREVRAQLKDIMVQQRMSLASCGTDWDIVRKCICAAYFHQA 1081
Query: 820 AYLHYSGVYRTVRGNEDLYIHPSSVLYTL 848
A L G Y +R ++HP+S L+ +
Sbjct: 1082 AKLKGIGEYVNIRTGMPCHLHPTSSLFGM 1110
Score = 38.1 bits (87), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 26/37 (70%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDIL 37
MT+GIL+ + ++ YS I++D+ HER++ TD+L
Sbjct: 628 MTDGILLRESLREADLDHYSAIIMDEAHERSLNTDVL 664
>sp|P15938|PRP16_YEAST Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=PRP16 PE=1 SV=2
Length = 1071
Score = 156 bits (394), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 89/211 (42%), Positives = 124/211 (58%), Gaps = 18/211 (8%)
Query: 347 KRTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYYSNDPVVNYVQGVV 406
+R LKLII+SAT++A++ F+ NA ++ G +PV Y+++PV +YV+ V
Sbjct: 495 RRRDLKLIITSATMNAKKFSAFF-----GNAPQFTIPGRTFPVQTIYTSNPVQDYVEAAV 549
Query: 407 DTAIKIH--ESMPVGDILAFVIGLEQIEHIIGILKQ-----------YHNQREDLKLLIL 453
A+KIH GDIL F+ G E IE L++ N E + IL
Sbjct: 550 SQAVKIHLANDCSSGDILIFMTGQEDIETTFDTLQEKFLQVYSKKFGTANFEEINDIEIL 609
Query: 454 PMHGSLPNNEQIKVFRPTPRAMRKIVIATNIAETSITIPGIVYVIDPGFVKARWFNPNTL 513
P++ +LP + Q K+F+ RKI+IATNIAETS+TI GI YVID G+ K + +NP
Sbjct: 610 PIYSALPADLQFKIFQDLHGTKRKIIIATNIAETSLTIKGIRYVIDCGYSKLKVYNPKIG 669
Query: 514 TNSLVVVPISKASAVQRAGRAGRVRSGHVYR 544
+SLV+ PISKA+A QR+GRAGR G YR
Sbjct: 670 LDSLVITPISKANADQRSGRAGRTAPGTAYR 700
Score = 114 bits (285), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 56/117 (47%), Positives = 82/117 (70%), Gaps = 2/117 (1%)
Query: 587 QYLLEAGWCYDT-KLIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVT 645
QYL E G+ D K I +T+PRR++ S+A RV+ E++ LG VGY+IRF+D T + T
Sbjct: 385 QYLYEEGYANDRGKSIVVTQPRRVAAISVAKRVAMEMQVPLGKEVGYSIRFEDVTDSECT 444
Query: 646 KIKYMTEGILMREMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKILKDKERDFE 702
K+K++T+GIL+RE + D L KYS +++DE HER++ TDIL+G KIL + RD +
Sbjct: 445 KLKFVTDGILLRETLLDDTLDKYSCVIIDEAHERSLNTDILLGFF-KILLARRRDLK 500
Score = 94.0 bits (232), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 85/146 (58%), Gaps = 2/146 (1%)
Query: 703 CSDEIASILSLLQVQDIFIKPSSGALSLKARVLRRNFEVEQGDLLTLLNIFKFYEKQENK 762
CSDE+ +I+S+L V +F +P +A + R F + + D LTLLN+F+ +
Sbjct: 801 CSDEMLTIVSMLSVPQVFYRPKER--QKEADIARNKFFIAKSDHLTLLNVFEQWRANNFS 858
Query: 763 KQFCHKYFFNYKVLKRAAELKNQMILLLKKSSIPLVTSPRNTNAVLKCLTNGFFSNAAYL 822
+C+K+F YK L RA ++++Q++ +LK IP+++S ++ + + KC+ +GF AA +
Sbjct: 859 SHWCNKHFVQYKSLVRARDIRDQLLTILKSQKIPVISSGKDWDIIKKCICSGFAHQAAKI 918
Query: 823 HYSGVYRTVRGNEDLYIHPSSVLYTL 848
Y ++ + +HP+S L+ L
Sbjct: 919 TGLRNYVHLKTGVSVQLHPTSALHGL 944
Score = 53.9 bits (128), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/96 (43%), Positives = 61/96 (63%), Gaps = 3/96 (3%)
Query: 46 RLYTEASFSQ-LNECTPPEMQRTELSSAVLQLKALGIHNIL-RFSFPSPPPAQNLRVALE 103
RLYTE +F + + T PE+QRT LS+ +L LK+L + + L +F F PP Q +L
Sbjct: 700 RLYTEDTFKEDMYLQTIPEIQRTNLSNTLLLLKSLDVTDELSKFPFIDKPPLQTFLSSLY 759
Query: 104 LLYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLL 139
L+ +GA+D +G LT P+G MA+ PL P +K+LL
Sbjct: 760 ELWFIGAIDTSGQLT-PLGLQMAKFPLQPSLSKILL 794
Score = 39.3 bits (90), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 29/38 (76%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILM 38
+T+GIL+ D +++KYS +++D+ HER++ TDIL+
Sbjct: 449 VTDGILLRETLLDDTLDKYSCVIIDEAHERSLNTDILL 486
>sp|Q9H6R0|DHX33_HUMAN Putative ATP-dependent RNA helicase DHX33 OS=Homo sapiens GN=DHX33
PE=1 SV=2
Length = 707
Score = 155 bits (393), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 85/218 (38%), Positives = 131/218 (60%), Gaps = 8/218 (3%)
Query: 330 DVIGEDMKAFAEQLKPLKRTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPV 389
DV+ +KA ++ K L + LK+I+ SAT+D + Q++N A +L ++G +P+
Sbjct: 204 DVLFGVVKAAQKRRKELGKLPLKVIVMSATMDVDLFSQYFN-----GAPVLYLEGRQHPI 258
Query: 390 SVYYSNDPVVNYVQGVVDTAIKIHESMPVG-DILAFVIGLEQIEHIIGILKQYHNQRED- 447
V+Y+ P +Y+ + + +IH+ P DIL F+ G E+IE + + D
Sbjct: 259 QVFYTKQPQNDYLHAALVSVFQIHQEAPSSQDILVFLTGQEEIEAMSKTCRDIAKHLPDG 318
Query: 448 -LKLLILPMHGSLPNNEQIKVFRPTPRAMRKIVIATNIAETSITIPGIVYVIDPGFVKAR 506
+L+LP++ SLP +Q++VF+ P+ RK++I+TNIAETSITI GI YV+D G VKA+
Sbjct: 319 CPAMLVLPLYASLPYAQQLRVFQGAPKGYRKVIISTNIAETSITITGIKYVVDTGMVKAK 378
Query: 507 WFNPNTLTNSLVVVPISKASAVQRAGRAGRVRSGHVYR 544
+NP++ L V +SK A QR GRAGR SG YR
Sbjct: 379 KYNPDSGLEVLAVQRVSKTQAWQRTGRAGREDSGICYR 416
Score = 127 bits (318), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 61/112 (54%), Positives = 84/112 (75%), Gaps = 2/112 (1%)
Query: 587 QYLLEAGWCYDTKLIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTK 646
QYL E G +I +T+PRR++ SLA RVS+E RT LG VGYT+RFDD T+ED T+
Sbjct: 109 QYLYEGGISRQ-GIIAVTQPRRVAAISLATRVSDEKRTELGKLVGYTVRFDDVTSED-TR 166
Query: 647 IKYMTEGILMREMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKILKDKE 698
IK++T+G+L+RE ++D LLRKYS ++LDE HERTI TD+L G++K K ++
Sbjct: 167 IKFLTDGMLLREAISDSLLRKYSCVILDEAHERTIHTDVLFGVVKAAQKRRK 218
Score = 92.8 bits (229), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 85/153 (55%), Gaps = 3/153 (1%)
Query: 701 FECSDEIASILSLLQVQDIFIKPSSGALSLKARVLRRNFEVEQGDLLTLLNIFKFYEKQE 760
F C++EI +I+SLL V + P S ++ +R+ F +GD +TLLNI++ ++
Sbjct: 516 FHCTEEILTIVSLLSVDSVLHNPPSRREEVQG--VRKKFISSEGDHMTLLNIYRTFKNLG 573
Query: 761 NKKQFCHKYFFNYKVLKRAAELKNQMILLLKKSSIPLVTSPRNTNAVLKCLTNGFFSNAA 820
K +C + F N K + AE++ Q+ + K S+P+ +S + +V +CL + F + A
Sbjct: 574 GNKDWCKENFVNSKNMTLVAEVRAQLRDICLKMSMPIASSRGDVESVRRCLAHSLFMSTA 633
Query: 821 YLHYSGVYRTVRGNEDLYIHPSSVLYTLQQPQC 853
L G Y T ++ + IHPSSVL+ +P C
Sbjct: 634 ELQPDGTYATTDTHQPVAIHPSSVLFHC-KPAC 665
Score = 70.1 bits (170), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 41/98 (41%), Positives = 59/98 (60%), Gaps = 2/98 (2%)
Query: 46 RLYTEASFSQLNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRVALELL 105
RLYTE F + ++ T PE+QR L+S +LQL A+ + N+L F F S P +++ A+ L
Sbjct: 416 RLYTEDEFEKFDKMTVPEIQRCNLASVMLQLLAMKVPNVLTFDFMSKPSPDHIQAAIAQL 475
Query: 106 YSLGAMD-VNGNLT-KPVGETMAEMPLHPIHAKVLLSS 141
LGA++ + LT P+G MA PL P AK +L S
Sbjct: 476 DLLGALEHKDDQLTLTPMGRKMAAFPLEPKFAKTILMS 513
Score = 40.8 bits (94), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 26/37 (70%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDIL 37
+T+G+L+ D + KYS ++LD+ HERTI TD+L
Sbjct: 170 LTDGMLLREAISDSLLRKYSCVILDEAHERTIHTDVL 206
>sp|Q03319|PRH1_SCHPO Probable ATP-dependent RNA helicase prh1 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=prh1 PE=3 SV=2
Length = 719
Score = 155 bits (393), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 81/200 (40%), Positives = 121/200 (60%), Gaps = 7/200 (3%)
Query: 347 KRTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYYSNDPVVNYVQGVV 406
KR L++II SAT++AE +F++ A I + G YPV ++Y+ P +Y+ +
Sbjct: 238 KRPALRVIIMSATLNAERFSEFFD-----GAEICYISGRQYPVQIHYTYTPEPDYLDACL 292
Query: 407 DTAIKIHESMPVGDILAFVIGLEQIEHIIGILKQYHNQREDL--KLLILPMHGSLPNNEQ 464
T ++H +P GDIL F+ G ++IE + ++K Y Q ++ P+ SLP +Q
Sbjct: 293 RTIFQLHTKLPPGDILVFLTGQDEIEALEALIKSYSKQLPSNLPQIQACPLFASLPQEQQ 352
Query: 465 IKVFRPTPRAMRKIVIATNIAETSITIPGIVYVIDPGFVKARWFNPNTLTNSLVVVPISK 524
++VF P RK+V++TNIAETS+TI GI YVID G K + FN SL V PIS+
Sbjct: 353 LQVFLPALANHRKVVLSTNIAETSVTISGIRYVIDTGLAKIKQFNSKLGLESLTVQPISQ 412
Query: 525 ASAVQRAGRAGRVRSGHVYR 544
++A+QR+GRAGR +G YR
Sbjct: 413 SAAMQRSGRAGREAAGQCYR 432
Score = 114 bits (284), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 53/111 (47%), Positives = 80/111 (72%), Gaps = 2/111 (1%)
Query: 587 QYLLEAGWCYDTKLIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTK 646
Q+L E + + + IT+PRR++ +LA RV+ E LG VGY+IRFDD TT T+
Sbjct: 131 QFLNECPYAQEG-CVAITQPRRVAAVNLAKRVAAEQGCRLGEQVGYSIRFDD-TTSKKTR 188
Query: 647 IKYMTEGILMREMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKILKDK 697
IKY+T+G+L+RE++ DP+L +Y ++LDE HERT+ TD+L+G +KKI+K +
Sbjct: 189 IKYLTDGMLLRELINDPILSQYHTLILDEAHERTLMTDMLLGFVKKIIKKR 239
Score = 82.0 bits (201), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 88/166 (53%), Gaps = 9/166 (5%)
Query: 685 ILMGLLKKILKDKERDFECSDEIASILSLLQVQDIFIKPSSGA-LSLKARVLRRNFEVEQ 743
+L L + +L +E + C E+ ++S L +F+ P +++AR+ F +
Sbjct: 515 LLPSLARAVLAAREHN--CLSEVIDVVSCLSTDSMFLFPQEKRDEAIEARL---KFLHSE 569
Query: 744 GDLLTLLNIFKFY--EKQENKKQFCHKYFFNYKVLKRAAELKNQMILLLKKSSIPLVTSP 801
GDLLT LN + Y +++KQ+C + F N + LK +++ Q+ K L +SP
Sbjct: 570 GDLLTCLNALRQYLESSHDSRKQWCSQNFINRRALKTILDIRKQLREHCLKDGWELNSSP 629
Query: 802 R-NTNAVLKCLTNGFFSNAAYLHYSGVYRTVRGNEDLYIHPSSVLY 846
N+ +L +G+ +N A LH G YRT+ GN+ + IHPSS L+
Sbjct: 630 EVNSENLLLSFLSGYITNTALLHPDGSYRTIIGNQTISIHPSSSLF 675
Score = 80.1 bits (196), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 43/103 (41%), Positives = 68/103 (66%), Gaps = 1/103 (0%)
Query: 39 ECSRKFSRLYTEASFSQLNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNL 98
E + + R+YTEA F +L + T PE++R +LS AVL LKA G ++++ F + PP + L
Sbjct: 425 EAAGQCYRIYTEADFDKLPKETIPEIKRIDLSQAVLTLKARGQNDVINFHYMDPPSKEGL 484
Query: 99 RVALELLYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLLSS 141
ALE LYS+GA+D NG++ +G M+ +PL P A+ +L++
Sbjct: 485 LRALEHLYSIGALDDNGHIND-LGYQMSLIPLLPSLARAVLAA 526
Score = 39.7 bits (91), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 30/44 (68%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILMECSRKF 44
+T+G+L+ +DP + +Y ++LD+ HERT+ TD+L+ +K
Sbjct: 192 LTDGMLLRELINDPILSQYHTLILDEAHERTLMTDMLLGFVKKI 235
>sp|Q9P774|PRP16_SCHPO Pre-mRNA-splicing factor ATP-dependent RNA helicase prp16
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=prp16 PE=3 SV=2
Length = 1173
Score = 155 bits (393), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 79/199 (39%), Positives = 120/199 (60%), Gaps = 6/199 (3%)
Query: 347 KRTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYYSNDPVVNYVQGVV 406
+R +KL+++SAT+++++ F+ A ++ G YPV + ++ P +YV+ V
Sbjct: 634 RRRDIKLLVTSATMNSQKFSDFFG-----GAPQFTIPGRTYPVDIMFAKAPCSDYVEAAV 688
Query: 407 DTAIKIHESMPVGDILAFVIGLEQIEHIIGILKQYHNQREDL-KLLILPMHGSLPNNEQI 465
++IH S P GDIL F+ G E IE I+ NQ D +L ILP++ +P + Q
Sbjct: 689 RQVLQIHLSQPAGDILVFMTGQEDIEATCEIIADRLNQLHDAPRLSILPIYSQMPADLQA 748
Query: 466 KVFRPTPRAMRKIVIATNIAETSITIPGIVYVIDPGFVKARWFNPNTLTNSLVVVPISKA 525
K+F +RK+V+ATNIAETS+T+ GI YV+D G+ K + +N ++L V PIS+A
Sbjct: 749 KIFDSAEPGVRKVVVATNIAETSLTVHGISYVVDTGYCKLKMYNSKLGIDTLQVTPISQA 808
Query: 526 SAVQRAGRAGRVRSGHVYR 544
+A QRAGRAGR G YR
Sbjct: 809 NANQRAGRAGRTGPGIAYR 827
Score = 122 bits (306), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 63/116 (54%), Positives = 85/116 (73%), Gaps = 3/116 (2%)
Query: 587 QYLLEAGWCYDTKLIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTK 646
Q+L E G+ + +IG T+PRR++ S+A RVSEE+ LG TVGY+IRF+D T D T
Sbjct: 527 QFLYEDGY-HRNGMIGCTQPRRVAAMSVAKRVSEEMGVRLGSTVGYSIRFEDVTGPD-TV 584
Query: 647 IKYMTEGILMREMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKILKDKERDFE 702
IKYMT+G+L+RE + L KYSVI++DE HER++ TDILMGLLKK+L + RD +
Sbjct: 585 IKYMTDGVLLRESLMQNNLEKYSVIIMDEAHERSLNTDILMGLLKKVLS-RRRDIK 639
Score = 84.0 bits (206), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 81/149 (54%), Gaps = 3/149 (2%)
Query: 700 DFECSDEIASILSLLQVQDIFIKPSSGALSLKARVLRRNFEVEQGDLLTLLNIFKFYEKQ 759
D++C++EI +I+S+L V +F +P A A R F V + D L LLNI++ +++
Sbjct: 924 DYKCTEEIITIVSMLSVPSVFYRPKERAEESDA--AREKFNVPESDHLMLLNIYQHWQRN 981
Query: 760 ENKKQFCHKYFFNYKVLKRAAELKNQMILLLKKSSIPLVTSPRNTNAVLKCLTNGFFSNA 819
+C K+F + K LKRA +++ Q++ ++ K I L S + + V + L + +F A
Sbjct: 982 GYSNSWCSKHFLHSKTLKRARDIRQQLVEIMSKQKISL-ESVSDWDIVRRVLCSAYFHQA 1040
Query: 820 AYLHYSGVYRTVRGNEDLYIHPSSVLYTL 848
A G Y +R ++H +S LY L
Sbjct: 1041 ACAKGIGEYVHLRSGMPCHLHVTSSLYGL 1069
Score = 70.9 bits (172), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 60/95 (63%), Gaps = 2/95 (2%)
Query: 46 RLYTEASF-SQLNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRVALEL 104
RLYTE ++ ++ E T PE+QRT LS+ VL LK+LG+ I F F PP L +L
Sbjct: 827 RLYTEMAYIREMFETTLPEIQRTNLSNTVLILKSLGVEEISDFDFMDRPPNDTLMASLYE 886
Query: 105 LYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLL 139
L++LGA+D G LT +G+ M+ P+ P +K+++
Sbjct: 887 LWTLGALDNFGKLT-TLGKKMSLFPMDPSLSKLII 920
Score = 43.9 bits (102), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 31/43 (72%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILMECSRK 43
MT+G+L+ ++EKYSVI++D+ HER++ TDILM +K
Sbjct: 588 MTDGVLLRESLMQNNLEKYSVIIMDEAHERSLNTDILMGLLKK 630
>sp|Q80VY9|DHX33_MOUSE Putative ATP-dependent RNA helicase DHX33 OS=Mus musculus GN=Dhx33
PE=1 SV=1
Length = 698
Score = 155 bits (392), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 83/218 (38%), Positives = 131/218 (60%), Gaps = 8/218 (3%)
Query: 330 DVIGEDMKAFAEQLKPLKRTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPV 389
DV+ +K ++ K L + LK+I+ SAT+D + Q++N A +L ++G +P+
Sbjct: 195 DVLFGVVKTAQKRRKELGKLPLKVIVMSATMDVDLFSQYFN-----RAPVLYLEGRQHPI 249
Query: 390 SVYYSNDPVVNYVQGVVDTAIKIHESMPVG-DILAFVIGLEQIEHIIGILKQYHNQRED- 447
++Y+ P +Y+ + + +IH+ P DIL F+ G E+IE + + D
Sbjct: 250 QIFYTKQPQQDYLHAALVSVFQIHQEAPASQDILVFLTGQEEIEAMSKTCRDIARHLPDG 309
Query: 448 -LKLLILPMHGSLPNNEQIKVFRPTPRAMRKIVIATNIAETSITIPGIVYVIDPGFVKAR 506
+L+LP++ SLP ++Q++VF+ P+ RK++I+TNIAETSITI GI YV+D G VKA+
Sbjct: 310 CPSMLVLPLYASLPYSQQLRVFQGAPKGYRKVIISTNIAETSITITGIKYVVDTGMVKAK 369
Query: 507 WFNPNTLTNSLVVVPISKASAVQRAGRAGRVRSGHVYR 544
+NP++ L V +SK A QR GRAGR SG YR
Sbjct: 370 KYNPDSGLEVLAVQRVSKTQAWQRTGRAGREDSGICYR 407
Score = 124 bits (312), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 60/112 (53%), Positives = 84/112 (75%), Gaps = 2/112 (1%)
Query: 587 QYLLEAGWCYDTKLIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTK 646
QYL E G +I +T+PRR++ SLA RVS+E RT LG VGYT+RF+D T+ED T+
Sbjct: 100 QYLYEGGISRQ-GIIAVTQPRRVAAISLATRVSDEKRTELGKLVGYTVRFEDVTSED-TR 157
Query: 647 IKYMTEGILMREMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKILKDKE 698
IK++T+G+L+RE ++D LLRKYS ++LDE HERTI TD+L G++K K ++
Sbjct: 158 IKFLTDGMLLREAISDSLLRKYSCVILDEAHERTIHTDVLFGVVKTAQKRRK 209
Score = 93.2 bits (230), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 87/153 (56%), Gaps = 3/153 (1%)
Query: 701 FECSDEIASILSLLQVQDIFIKPSSGALSLKARVLRRNFEVEQGDLLTLLNIFKFYEKQE 760
F C++EI +I+SLL V + P + +++ +R+ F +GD +TLLNI++ ++
Sbjct: 507 FHCTEEILTIVSLLSVDSVLYNPPARRDEVQS--VRKKFISSEGDHITLLNIYRTFKNIG 564
Query: 761 NKKQFCHKYFFNYKVLKRAAELKNQMILLLKKSSIPLVTSPRNTNAVLKCLTNGFFSNAA 820
K +C + F N K + AE++ Q+ + K S+P+++S + +V +C+ + F N A
Sbjct: 565 GNKDWCKENFVNSKNMLLVAEVRAQLREICLKMSMPIMSSRGDMESVRRCMAHSLFMNTA 624
Query: 821 YLHYSGVYRTVRGNEDLYIHPSSVLYTLQQPQC 853
L G Y T ++ + IHPSSVL+ +P C
Sbjct: 625 ELQTDGTYATTDTHQPVAIHPSSVLFHC-KPAC 656
Score = 70.9 bits (172), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 57/99 (57%), Gaps = 2/99 (2%)
Query: 46 RLYTEASFSQLNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRVALELL 105
RLYTE F + + T PE+QR L+S +LQL A+ + N+L F F S P ++ A+ L
Sbjct: 407 RLYTEDEFEKFEKMTVPEIQRCNLASVILQLLAMKVPNVLTFDFMSKPSPDHIEAAIAQL 466
Query: 106 YSLGAMD-VNGNLT-KPVGETMAEMPLHPIHAKVLLSSG 142
LGA++ + LT P+G MA PL P AK +L S
Sbjct: 467 DLLGALEHKDDQLTLTPIGRKMAAFPLEPRFAKTILLSS 505
Score = 40.8 bits (94), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 26/37 (70%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDIL 37
+T+G+L+ D + KYS ++LD+ HERTI TD+L
Sbjct: 161 LTDGMLLREAISDSLLRKYSCVILDEAHERTIHTDVL 197
>sp|O43143|DHX15_HUMAN Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15
OS=Homo sapiens GN=DHX15 PE=1 SV=2
Length = 795
Score = 150 bits (379), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 82/210 (39%), Positives = 130/210 (61%), Gaps = 20/210 (9%)
Query: 347 KRTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYYSNDPVVNYVQGVV 406
+R+ LK+I+ SAT+DA + +++ N +L++ G +PV ++Y+ +P +Y++ +
Sbjct: 282 QRSDLKVIVMSATLDAGKFQIYFD-----NCPLLTIPGRTHPVEIFYTPEPERDYLEAAI 336
Query: 407 DTAIKIHE-SMPVGDILAFVIGLEQIEHIIGILKQYHNQREDL-----KLLILPMHGSLP 460
T I+IH GD+L F+ G E+I+ +K+ + +DL + I+P++ +LP
Sbjct: 337 RTVIQIHMCEEEEGDLLLFLTGQEEIDEACKRIKR---EVDDLGPEVGDIKIIPLYSTLP 393
Query: 461 NNEQIKVFRPTPRAM------RKIVIATNIAETSITIPGIVYVIDPGFVKARWFNPNTLT 514
+Q ++F P P RK+V++TNIAETS+TI G+V+VIDPGF K + +NP
Sbjct: 394 PQQQQRIFEPPPPKKQNGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRV 453
Query: 515 NSLVVVPISKASAVQRAGRAGRVRSGHVYR 544
SL+V ISKASA QRAGRAGR R G +R
Sbjct: 454 ESLLVTAISKASAQQRAGRAGRTRPGKCFR 483
Score = 117 bits (294), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 53/112 (47%), Positives = 80/112 (71%), Gaps = 9/112 (8%)
Query: 594 WCYD--------TKLIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVT 645
WC + + + T+PRR++ S+A RV++E+ LG VGY+IRF+DC++ T
Sbjct: 173 WCVEYMRSLPGPKRGVACTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAK-T 231
Query: 646 KIKYMTEGILMREMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKILKDK 697
+KYMT+G+L+RE M DPLL +Y VI+LDE HERT+ TDILMG+LK++++ +
Sbjct: 232 ILKYMTDGMLLREAMNDPLLERYGVIILDEAHERTLATDILMGVLKEVVRQR 283
Score = 86.3 bits (212), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 82/150 (54%), Gaps = 6/150 (4%)
Query: 700 DFECSDEIASILSLLQVQDIFIKPSSGALSLKARVLRRNFEVEQGDLLTLLNIFKFYEKQ 759
D+ CS+E+ SI ++L V F++P+ + +R F GD LTLLN++ +++
Sbjct: 580 DYNCSNEVLSITAMLSVPQCFVRPTEAKKAADEAKMR--FAHIDGDHLTLLNVYHAFKQN 637
Query: 760 ENKKQFCHKYFFNYKVLKRAAELKNQMILLLKKSSIPLVTSPRNTN----AVLKCLTNGF 815
Q+C+ F NY+ L A ++ Q+ ++ + ++P ++ + + K L G+
Sbjct: 638 HESVQWCYDNFINYRSLMSADNVRQQLSRIMDRFNLPRRSTDFTSRDYYINIRKALVTGY 697
Query: 816 FSNAAYLHYSGVYRTVRGNEDLYIHPSSVL 845
F A+L +G Y TV+ N+ + +HPS+VL
Sbjct: 698 FMQVAHLERTGHYLTVKDNQVVQLHPSTVL 727
Score = 80.1 bits (196), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 45/100 (45%), Positives = 67/100 (67%), Gaps = 2/100 (2%)
Query: 43 KFSRLYTEASF-SQLNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRVA 101
K RLYTE ++ +++ + T PE+ R+ L S VLQLK LGI +++ F F PP + L A
Sbjct: 480 KCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMRA 539
Query: 102 LELLYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLLSS 141
LELL L A++ +G+LT+ +G MAE PL P AK++++S
Sbjct: 540 LELLNYLAALNDDGDLTE-LGSMMAEFPLDPQLAKMVIAS 578
Score = 48.5 bits (114), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 30/38 (78%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILM 38
MT+G+L+ +DP +E+Y VI+LD+ HERT+ TDILM
Sbjct: 236 MTDGMLLREAMNDPLLERYGVIILDEAHERTLATDILM 273
>sp|Q5RAZ4|DHX15_PONAB Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15
OS=Pongo abelii GN=DHX15 PE=2 SV=2
Length = 795
Score = 150 bits (379), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 82/210 (39%), Positives = 130/210 (61%), Gaps = 20/210 (9%)
Query: 347 KRTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYYSNDPVVNYVQGVV 406
+R+ LK+I+ SAT+DA + +++ N +L++ G +PV ++Y+ +P +Y++ +
Sbjct: 282 QRSDLKVIVMSATLDAGKFQIYFD-----NCPLLTIPGRTHPVEIFYTPEPERDYLEAAI 336
Query: 407 DTAIKIHE-SMPVGDILAFVIGLEQIEHIIGILKQYHNQREDL-----KLLILPMHGSLP 460
T I+IH GD+L F+ G E+I+ +K+ + +DL + I+P++ +LP
Sbjct: 337 RTVIQIHMCEEEEGDLLLFLTGQEEIDEACKRIKR---EVDDLGPEVGDIKIIPLYSTLP 393
Query: 461 NNEQIKVFRPTPRAM------RKIVIATNIAETSITIPGIVYVIDPGFVKARWFNPNTLT 514
+Q ++F P P RK+V++TNIAETS+TI G+V+VIDPGF K + +NP
Sbjct: 394 PQQQQRIFEPPPPKKQNGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRV 453
Query: 515 NSLVVVPISKASAVQRAGRAGRVRSGHVYR 544
SL+V ISKASA QRAGRAGR R G +R
Sbjct: 454 ESLLVTAISKASAQQRAGRAGRTRPGKCFR 483
Score = 118 bits (295), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 53/112 (47%), Positives = 80/112 (71%), Gaps = 9/112 (8%)
Query: 594 WCYD--------TKLIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVT 645
WC + + + T+PRR++ S+A RV++E+ LG VGY+IRF+DC++ T
Sbjct: 173 WCVEYMRSLPGPKRGVACTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAK-T 231
Query: 646 KIKYMTEGILMREMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKILKDK 697
+KYMT+G+L+RE M DPLL +Y VI+LDE HERT+ TDILMG+LK++++ +
Sbjct: 232 ILKYMTDGMLLREAMNDPLLERYGVIILDEAHERTLATDILMGVLKEVVRQR 283
Score = 86.3 bits (212), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 82/150 (54%), Gaps = 6/150 (4%)
Query: 700 DFECSDEIASILSLLQVQDIFIKPSSGALSLKARVLRRNFEVEQGDLLTLLNIFKFYEKQ 759
D+ CS+E+ SI ++L V F++P+ + +R F GD LTLLN++ +++
Sbjct: 580 DYNCSNEVLSITAMLSVPQCFVRPTEAKKAADEAKMR--FAHIDGDHLTLLNVYHAFKQN 637
Query: 760 ENKKQFCHKYFFNYKVLKRAAELKNQMILLLKKSSIPLVTSPRNTN----AVLKCLTNGF 815
Q+C+ F NY+ L A ++ Q+ ++ + ++P ++ + + K L G+
Sbjct: 638 HESVQWCYDNFINYRSLMSADNVRQQLSRIMDRFNLPRRSTDFTSRDYYINIRKALVTGY 697
Query: 816 FSNAAYLHYSGVYRTVRGNEDLYIHPSSVL 845
F A+L +G Y TV+ N+ + +HPS+VL
Sbjct: 698 FMQVAHLERTGHYLTVKDNQVVQLHPSTVL 727
Score = 80.1 bits (196), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 45/100 (45%), Positives = 67/100 (67%), Gaps = 2/100 (2%)
Query: 43 KFSRLYTEASF-SQLNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRVA 101
K RLYTE ++ +++ + T PE+ R+ L S VLQLK LGI +++ F F PP + L A
Sbjct: 480 KCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMRA 539
Query: 102 LELLYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLLSS 141
LELL L A++ +G+LT+ +G MAE PL P AK++++S
Sbjct: 540 LELLNYLAALNDDGDLTE-LGSMMAEFPLDPQLAKMVIAS 578
Score = 48.5 bits (114), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 30/38 (78%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILM 38
MT+G+L+ +DP +E+Y VI+LD+ HERT+ TDILM
Sbjct: 236 MTDGMLLREAMNDPLLERYGVIILDEAHERTLATDILM 273
>sp|O35286|DHX15_MOUSE Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15
OS=Mus musculus GN=Dhx15 PE=2 SV=2
Length = 795
Score = 150 bits (379), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 82/210 (39%), Positives = 130/210 (61%), Gaps = 20/210 (9%)
Query: 347 KRTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYYSNDPVVNYVQGVV 406
+R+ LK+I+ SAT+DA + +++ N +L++ G +PV ++Y+ +P +Y++ +
Sbjct: 282 QRSDLKVIVMSATLDAGKFQIYFD-----NCPLLTIPGRTHPVEIFYTPEPERDYLEAAI 336
Query: 407 DTAIKIHE-SMPVGDILAFVIGLEQIEHIIGILKQYHNQREDL-----KLLILPMHGSLP 460
T I+IH GD+L F+ G E+I+ +K+ + +DL + I+P++ +LP
Sbjct: 337 RTVIQIHMCEEEEGDLLLFLTGQEEIDEACKRIKR---EVDDLGPEVGDIKIIPLYSTLP 393
Query: 461 NNEQIKVFRPTPRAM------RKIVIATNIAETSITIPGIVYVIDPGFVKARWFNPNTLT 514
+Q ++F P P RK+V++TNIAETS+TI G+V+VIDPGF K + +NP
Sbjct: 394 PQQQQRIFEPPPPKKQNGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRV 453
Query: 515 NSLVVVPISKASAVQRAGRAGRVRSGHVYR 544
SL+V ISKASA QRAGRAGR R G +R
Sbjct: 454 ESLLVTAISKASAQQRAGRAGRTRPGKCFR 483
Score = 117 bits (294), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 53/112 (47%), Positives = 80/112 (71%), Gaps = 9/112 (8%)
Query: 594 WCYD--------TKLIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVT 645
WC + + + T+PRR++ S+A RV++E+ LG VGY+IRF+DC++ T
Sbjct: 173 WCVEYMRSLPGPKRGVACTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAK-T 231
Query: 646 KIKYMTEGILMREMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKILKDK 697
+KYMT+G+L+RE M DPLL +Y VI+LDE HERT+ TDILMG+LK++++ +
Sbjct: 232 ILKYMTDGMLLREAMNDPLLERYGVIILDEAHERTLATDILMGVLKEVVRQR 283
Score = 86.3 bits (212), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 82/150 (54%), Gaps = 6/150 (4%)
Query: 700 DFECSDEIASILSLLQVQDIFIKPSSGALSLKARVLRRNFEVEQGDLLTLLNIFKFYEKQ 759
D+ CS+E+ SI ++L V F++P+ + +R F GD LTLLN++ +++
Sbjct: 580 DYNCSNEVLSITAMLSVPQCFVRPTEAKKAADEAKMR--FAHIDGDHLTLLNVYHAFKQN 637
Query: 760 ENKKQFCHKYFFNYKVLKRAAELKNQMILLLKKSSIPLVTSPRNTN----AVLKCLTNGF 815
Q+C+ F NY+ L A ++ Q+ ++ + ++P ++ + + K L G+
Sbjct: 638 HESVQWCYDNFINYRSLMSADNVRQQLSRIMDRFNLPRRSTDFTSRDYYINIRKALVTGY 697
Query: 816 FSNAAYLHYSGVYRTVRGNEDLYIHPSSVL 845
F A+L +G Y TV+ N+ + +HPS+VL
Sbjct: 698 FMQVAHLERTGHYLTVKDNQVVQLHPSTVL 727
Score = 80.1 bits (196), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 45/100 (45%), Positives = 67/100 (67%), Gaps = 2/100 (2%)
Query: 43 KFSRLYTEASF-SQLNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRVA 101
K RLYTE ++ +++ + T PE+ R+ L S VLQLK LGI +++ F F PP + L A
Sbjct: 480 KCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMRA 539
Query: 102 LELLYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLLSS 141
LELL L A++ +G+LT+ +G MAE PL P AK++++S
Sbjct: 540 LELLNYLAALNDDGDLTE-LGSMMAEFPLDPQLAKMVIAS 578
Score = 48.5 bits (114), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 30/38 (78%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILM 38
MT+G+L+ +DP +E+Y VI+LD+ HERT+ TDILM
Sbjct: 236 MTDGMLLREAMNDPLLERYGVIILDEAHERTLATDILM 273
>sp|Q20875|DHX15_CAEEL Putative pre-mRNA-splicing factor ATP-dependent RNA helicase
F56D2.6 OS=Caenorhabditis elegans GN=F56D2.6 PE=2 SV=1
Length = 739
Score = 146 bits (368), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 83/206 (40%), Positives = 124/206 (60%), Gaps = 14/206 (6%)
Query: 348 RTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYYSNDPVVNYVQGVVD 407
R +K++I SAT+DA + +++ + +LSV G +PV ++++ + +Y++ +
Sbjct: 227 RADIKVVIMSATLDAGKFQRYF-----EDCPLLSVPGRTFPVEIFFTPNAEKDYLEAAIR 281
Query: 408 TAIKIHESMPV-GDILAFVIGLEQIEHIIG-ILKQYHNQREDLKLL-ILPMHGSLPNNEQ 464
T I+IH V GDIL F+ G E+IE I ++ D L +P++ +LP Q
Sbjct: 282 TVIQIHMVEEVEGDILLFLTGQEEIEEACKRIDREIQALGADAGALSCIPLYSTLPPAAQ 341
Query: 465 IKVFRPTP------RAMRKIVIATNIAETSITIPGIVYVIDPGFVKARWFNPNTLTNSLV 518
++F P P RK VI+TNIAETS+TI G+V+VIDPGF K + +NP SL+
Sbjct: 342 QRIFEPAPPNRPNGAISRKCVISTNIAETSLTIDGVVFVIDPGFSKQKVYNPRIRVESLL 401
Query: 519 VVPISKASAVQRAGRAGRVRSGHVYR 544
V PISKASA+QRAGRAGR + G +R
Sbjct: 402 VCPISKASAMQRAGRAGRTKPGKCFR 427
Score = 118 bits (295), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 53/100 (53%), Positives = 77/100 (77%), Gaps = 1/100 (1%)
Query: 598 TKLIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTKIKYMTEGILMR 657
+L+ T+PRR++ S+A RV+EE+ LG VGY+IRF+DC +E T +KY T+G+L+R
Sbjct: 129 ARLVACTQPRRVAAMSVATRVAEEMDVVLGQEVGYSIRFEDCISER-TVLKYCTDGMLLR 187
Query: 658 EMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKILKDK 697
E M PLL KY V++LDE HERT+ TDILMGL+K+I++++
Sbjct: 188 EAMNSPLLDKYKVLILDEAHERTLATDILMGLIKEIVRNR 227
Score = 85.5 bits (210), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 84/150 (56%), Gaps = 6/150 (4%)
Query: 700 DFECSDEIASILSLLQVQDIFIKPSSGALSLKARVLRRNFEVEQGDLLTLLNIFKFYEKQ 759
+ CS+EI SI ++L V +++P+ + +A + F GD LTLLN++ +++
Sbjct: 524 ELNCSNEILSITAMLSVPQCWVRPNE--MRTEADEAKARFAHIDGDHLTLLNVYHSFKQN 581
Query: 760 ENKKQFCHKYFFNYKVLKRAAELKNQMILLLKKSSIPLVTSPRNTN----AVLKCLTNGF 815
+ Q+C+ F NY+ +K A ++ Q+ ++ K ++ V++ + + K L GF
Sbjct: 582 QEDPQWCYDNFINYRTMKTADTVRTQLSRVMDKYNLRRVSTDFKSRDYYLNIRKALVAGF 641
Query: 816 FSNAAYLHYSGVYRTVRGNEDLYIHPSSVL 845
F A+L SG Y TV+ N+ + +HPS+VL
Sbjct: 642 FMQVAHLERSGHYVTVKDNQLVNLHPSTVL 671
Score = 80.9 bits (198), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 50/111 (45%), Positives = 72/111 (64%), Gaps = 3/111 (2%)
Query: 43 KFSRLYTEASF-SQLNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRVA 101
K RLYTE ++ S++ + T PE+ R+ L S VLQLK LG +++ F F PP + L A
Sbjct: 424 KCFRLYTETAYGSEMQDQTYPEILRSNLGSVVLQLKKLGTEDLVHFDFMDPPAPETLMRA 483
Query: 102 LELLYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLLSSGSVLDSAVEIL 152
LELL L A++ +G LT+ +G MAE PL P AK+L++S + L+ + EIL
Sbjct: 484 LELLNYLQAINDDGELTE-LGSLMAEFPLDPQLAKMLITS-TELNCSNEIL 532
Score = 42.7 bits (99), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 31/45 (68%)
Query: 2 TEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILMECSRKFSR 46
T+G+L+ + P ++KY V++LD+ HERT+ TDILM ++ R
Sbjct: 181 TDGMLLREAMNSPLLDKYKVLILDEAHERTLATDILMGLIKEIVR 225
>sp|Q8IX18|DHX40_HUMAN Probable ATP-dependent RNA helicase DHX40 OS=Homo sapiens GN=DHX40
PE=1 SV=2
Length = 779
Score = 143 bits (361), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 92/252 (36%), Positives = 138/252 (54%), Gaps = 24/252 (9%)
Query: 330 DVIGEDMKAFAEQLKPLKRTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPV 389
D++ +K ++ P ++ LK+++ SAT++ ++ F+ N I + G LYPV
Sbjct: 183 DILFGLLKKLFQEKSPNRKEHLKVVVMSATMELAKLSAFFG-----NCPIFDIPGRLYPV 237
Query: 390 SVYYSN------DPVVNYVQGVVDTAIKIHESMPVGDILAFVIGLEQIEHIIGILKQ--- 440
+ N Y+Q +V + IH + GDIL F+ G +IE +L Q
Sbjct: 238 REKFCNLIGPRDRENTAYIQAIVKVTMDIHLNEMAGDILVFLTGQFEIEKSCELLFQMAE 297
Query: 441 -----YHNQREDLK-LLILPMHGSLPNNEQIKVFRPTPRAMRKIVIATNIAETSITIPGI 494
Y Q L LLILP +GS+ ++Q ++F P P +RK VI+TNI+ TS+TI GI
Sbjct: 298 SVDYDYDVQDTTLDGLLILPCYGSMTTDQQRRIFLPPPPGIRKCVISTNISATSLTIDGI 357
Query: 495 VYVIDPGFVKARWFNPNTLTNSLVVVPISKASAVQRAGRAGRVRSGHVYRKNFMYNRLFI 554
YV+D GFVK NP + L VVPISK+ A+QR+GRAGR SG +R +Y++ F
Sbjct: 358 RYVVDGGFVKQLNHNPRLGLDILEVVPISKSEALQRSGRAGRTSSGKCFR---IYSKDFW 414
Query: 555 HFCVSRN-IPTI 565
+ C+ + IP I
Sbjct: 415 NQCMPDHVIPEI 426
Score = 127 bits (320), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 59/111 (53%), Positives = 87/111 (78%), Gaps = 2/111 (1%)
Query: 587 QYLLEAGWCYDTKLIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTK 646
+YL EAG+ +IG+T+PR+++ S+A RV+EE++ TLG VGY +RFDDC++++ T
Sbjct: 88 KYLYEAGFSQHG-MIGVTQPRKVAAISVAQRVAEEMKCTLGSKVGYQVRFDDCSSKE-TA 145
Query: 647 IKYMTEGILMREMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKILKDK 697
IKYMT+G L++ ++ DP L K+SVI+LDE HERT+ TDIL GLLKK+ ++K
Sbjct: 146 IKYMTDGCLLKHILGDPNLTKFSVIILDEAHERTLTTDILFGLLKKLFQEK 196
Score = 67.0 bits (162), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 65/110 (59%), Gaps = 9/110 (8%)
Query: 41 SRKFSRLYTEASFSQLNECTP----PEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQ 96
S K R+Y++ + N+C P PE++RT L+S VL LK L IH+++RF + PP +
Sbjct: 402 SGKCFRIYSKDFW---NQCMPDHVIPEIKRTSLTSVVLTLKCLAIHDVIRFPYLDPPNER 458
Query: 97 NLRVALELLYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLLSSGSVLD 146
+ AL+ LY A+D +G++T+ +G +M E PL P H + + LD
Sbjct: 459 LILEALKQLYQCDAIDRSGHVTR-LGLSMVEFPLPP-HLTCAVIKAASLD 506
Score = 61.2 bits (147), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 74/159 (46%), Gaps = 9/159 (5%)
Query: 697 KERDFECSDEIASILSLLQVQDIFIKPSSGALSLKARVLRRNFEVEQG---DLLTLLNIF 753
K +C D + I ++L V+++FI+P +A R + G D TL IF
Sbjct: 501 KAASLDCEDLLLPIAAMLSVENVFIRPVDPEYQKEAEQRHRELAAKAGGFNDFATLAVIF 560
Query: 754 KFYEKQENKKQFCHKYFFNYKVLKRAAELKNQMILLLKK----SSIPLVTSPRNTNAVL- 808
+ + +C K++ +++ L A ++ Q+ L++K S P T + VL
Sbjct: 561 EQCKSSGAPASWCQKHWIHWRCLFSAFRVEAQLRELIRKLKQQSDFPKETFEGPKHEVLR 620
Query: 809 KCLTNGFFSNAAYLHYSGVYRTVRG-NEDLYIHPSSVLY 846
+CL G+F N A + T+ G ++IHPSS L+
Sbjct: 621 RCLCAGYFKNVARRSVGRTFCTMDGRGSPVHIHPSSALH 659
Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 36/52 (69%), Gaps = 3/52 (5%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILMECSRKFSRLYTEAS 52
MT+G L+++ DP++ K+SVI+LD+ HERT+ TDIL +K L+ E S
Sbjct: 149 MTDGCLLKHILGDPNLTKFSVIILDEAHERTLTTDILFGLLKK---LFQEKS 197
>sp|Q5R864|DHX40_PONAB Probable ATP-dependent RNA helicase DHX40 OS=Pongo abelii GN=DHX40
PE=2 SV=1
Length = 779
Score = 143 bits (360), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 92/252 (36%), Positives = 138/252 (54%), Gaps = 24/252 (9%)
Query: 330 DVIGEDMKAFAEQLKPLKRTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPV 389
D++ +K ++ P ++ LK+++ SAT++ ++ F+ N I + G LYPV
Sbjct: 183 DILFGLLKKLFQEKSPNRKEHLKVVVMSATMELAKLSAFFG-----NCPIFDIPGRLYPV 237
Query: 390 SVYYSN------DPVVNYVQGVVDTAIKIHESMPVGDILAFVIGLEQIEHIIGILKQ--- 440
+ N Y+Q +V + IH + GDIL F+ G +IE +L Q
Sbjct: 238 REKFCNLIGPRDRENTAYIQAIVKVTMDIHLNEMAGDILVFLTGQFEIEKSCELLFQMAE 297
Query: 441 -----YHNQREDLK-LLILPMHGSLPNNEQIKVFRPTPRAMRKIVIATNIAETSITIPGI 494
Y Q L LLILP +GS+ ++Q ++F P P +RK VI+TNI+ TS+TI GI
Sbjct: 298 SVDYDYDVQDTTLDGLLILPCYGSMTTDQQRRIFLPPPPGIRKCVISTNISATSLTIDGI 357
Query: 495 VYVIDPGFVKARWFNPNTLTNSLVVVPISKASAVQRAGRAGRVRSGHVYRKNFMYNRLFI 554
YV+D GFVK NP + L VVPISK+ A+QR+GRAGR SG +R +Y++ F
Sbjct: 358 RYVVDGGFVKQLNHNPRLGLDILEVVPISKSEALQRSGRAGRTASGKCFR---IYSKDFW 414
Query: 555 HFCVSRN-IPTI 565
+ C+ + IP I
Sbjct: 415 NQCMPDHVIPEI 426
Score = 127 bits (319), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 59/111 (53%), Positives = 87/111 (78%), Gaps = 2/111 (1%)
Query: 587 QYLLEAGWCYDTKLIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTK 646
+YL EAG+ +IG+T+PR+++ S+A RV+EE++ TLG VGY +RFDDC++++ T
Sbjct: 88 KYLYEAGFSQHG-MIGVTQPRKVAAISVAQRVAEEMKCTLGSKVGYQVRFDDCSSKE-TA 145
Query: 647 IKYMTEGILMREMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKILKDK 697
IKYMT+G L++ ++ DP L K+SVI+LDE HERT+ TDIL GLLKK+ ++K
Sbjct: 146 IKYMTDGCLLKHILGDPNLTKFSVIILDEAHERTLTTDILFGLLKKLFQEK 196
Score = 67.0 bits (162), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 65/110 (59%), Gaps = 9/110 (8%)
Query: 41 SRKFSRLYTEASFSQLNECTP----PEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQ 96
S K R+Y++ + N+C P PE++RT L+S VL LK L IH+++RF + PP +
Sbjct: 402 SGKCFRIYSKDFW---NQCMPDHVIPEIKRTSLTSVVLTLKCLAIHDVIRFPYLDPPNER 458
Query: 97 NLRVALELLYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLLSSGSVLD 146
+ AL+ LY A+D +G++T+ +G +M E PL P H + + LD
Sbjct: 459 LILEALKQLYQCDAIDRSGHVTR-LGLSMVEFPLPP-HLTCAVIKAASLD 506
Score = 61.6 bits (148), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 74/159 (46%), Gaps = 9/159 (5%)
Query: 697 KERDFECSDEIASILSLLQVQDIFIKPSSGALSLKARVLRRNFEVEQG---DLLTLLNIF 753
K +C D + I ++L V+++FI+P +A R + G D TL IF
Sbjct: 501 KAASLDCEDLLLPIAAMLSVENVFIRPVDPEYQKEAEQRHRELAAKAGGFNDFATLAVIF 560
Query: 754 KFYEKQENKKQFCHKYFFNYKVLKRAAELKNQMILLLKK----SSIPLVTSPRNTNAVL- 808
+ + +C K++ +++ L A ++ Q+ L++K S P T + VL
Sbjct: 561 EQCKSSGAPASWCQKHWIHWRCLFSAFRVEAQLRELIRKLKQQSDFPRETFEGPKHEVLR 620
Query: 809 KCLTNGFFSNAAYLHYSGVYRTVRG-NEDLYIHPSSVLY 846
+CL G+F N A + T+ G ++IHPSS L+
Sbjct: 621 RCLCAGYFKNVARRSVGRTFCTMDGRGSPVHIHPSSALH 659
Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 36/52 (69%), Gaps = 3/52 (5%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILMECSRKFSRLYTEAS 52
MT+G L+++ DP++ K+SVI+LD+ HERT+ TDIL +K L+ E S
Sbjct: 149 MTDGCLLKHILGDPNLTKFSVIILDEAHERTLTTDILFGLLKK---LFQEKS 197
>sp|Q5XI69|DHX40_RAT Probable ATP-dependent RNA helicase DHX40 OS=Rattus norvegicus
GN=Dhx40 PE=2 SV=1
Length = 779
Score = 142 bits (358), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 92/252 (36%), Positives = 137/252 (54%), Gaps = 24/252 (9%)
Query: 330 DVIGEDMKAFAEQLKPLKRTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPV 389
D++ +K + P ++ LK+++ SAT++ ++ F+ N I + G LYPV
Sbjct: 183 DILFGLLKKLFQDKSPNRKEHLKVVVMSATMELAKLSAFFG-----NCPIFDIPGRLYPV 237
Query: 390 SVYYSN------DPVVNYVQGVVDTAIKIHESMPVGDILAFVIGLEQIEHIIGILKQ--- 440
+ N Y+Q +V + IH + GDIL F+ G +IE +L Q
Sbjct: 238 REKFCNLIGPRDRENTAYIQAIVKVTMDIHLNEMAGDILVFLTGQFEIEKSCELLFQMAE 297
Query: 441 -----YHNQREDLK-LLILPMHGSLPNNEQIKVFRPTPRAMRKIVIATNIAETSITIPGI 494
Y Q L LLILP +GS+ ++Q ++F P P +RK VI+TNI+ TS+TI GI
Sbjct: 298 SVDYDYDVQDTTLDGLLILPCYGSMTTDQQRRIFLPPPPGIRKCVISTNISATSLTIDGI 357
Query: 495 VYVIDPGFVKARWFNPNTLTNSLVVVPISKASAVQRAGRAGRVRSGHVYRKNFMYNRLFI 554
YV+D GFVK NP + L VVPISK+ A+QR+GRAGR SG +R +Y++ F
Sbjct: 358 RYVVDGGFVKQLNHNPRLGLDILEVVPISKSEALQRSGRAGRTASGKCFR---IYSKDFW 414
Query: 555 HFCVSRN-IPTI 565
+ C+ + IP I
Sbjct: 415 NQCMPDHVIPEI 426
Score = 129 bits (325), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 60/111 (54%), Positives = 87/111 (78%), Gaps = 2/111 (1%)
Query: 587 QYLLEAGWCYDTKLIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTK 646
+YL EAG+ +IG+T+PR+++ S+A RV+EE++ TLG VGY +RFDDC++++ T
Sbjct: 88 KYLYEAGFSQHG-MIGVTQPRKVAAISVAQRVAEEMKCTLGSKVGYQVRFDDCSSKE-TA 145
Query: 647 IKYMTEGILMREMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKILKDK 697
IKYMT+G L++ ++ DP L K+SVI+LDE HERT+ TDIL GLLKK+ +DK
Sbjct: 146 IKYMTDGCLLKHILGDPNLNKFSVIILDEAHERTLTTDILFGLLKKLFQDK 196
Score = 66.6 bits (161), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 60/96 (62%), Gaps = 8/96 (8%)
Query: 41 SRKFSRLYTEASFSQLNECTP----PEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQ 96
S K R+Y++ + N+C P PE++RT L+S VL LK L IH+++RF + PP +
Sbjct: 402 SGKCFRIYSKDFW---NQCMPDHVIPEIKRTSLTSVVLTLKCLAIHDVIRFPYLDPPNER 458
Query: 97 NLRVALELLYSLGAMDVNGNLTKPVGETMAEMPLHP 132
+ AL+ LY A+D +G++T+ +G +M E PL P
Sbjct: 459 LILEALKQLYQCDAIDRSGHVTR-LGLSMVEFPLPP 493
Score = 60.8 bits (146), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 73/155 (47%), Gaps = 9/155 (5%)
Query: 701 FECSDEIASILSLLQVQDIFIKPSSGALSLKARVLRRNFEVEQG---DLLTLLNIFKFYE 757
+C D + I ++L V+++FI+P +A R + G D TL IF+ +
Sbjct: 505 LDCEDLLLPIAAMLSVENVFIRPVDPEYQKEAEQKHRELAAKAGGFNDFATLAVIFEQCK 564
Query: 758 KQENKKQFCHKYFFNYKVLKRAAELKNQMILLLKK----SSIPLVTSPRNTNAVL-KCLT 812
+C K++ +++ L A ++ Q+ L++K S P T + VL +CL
Sbjct: 565 SSGAPASWCQKHWIHWRCLFSAFRVEAQLRELIRKLKQQSDFPRETFEGPKHEVLRRCLC 624
Query: 813 NGFFSNAAYLHYSGVYRTVRG-NEDLYIHPSSVLY 846
G+F N A + T+ G ++IHPSS L+
Sbjct: 625 AGYFKNVARRSVGRTFCTMDGRGSPVHIHPSSALH 659
Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 30/38 (78%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILM 38
MT+G L+++ DP++ K+SVI+LD+ HERT+ TDIL
Sbjct: 149 MTDGCLLKHILGDPNLNKFSVIILDEAHERTLTTDILF 186
>sp|Q6PE54|DHX40_MOUSE Probable ATP-dependent RNA helicase DHX40 OS=Mus musculus GN=Dhx40
PE=2 SV=1
Length = 779
Score = 142 bits (358), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 92/252 (36%), Positives = 136/252 (53%), Gaps = 24/252 (9%)
Query: 330 DVIGEDMKAFAEQLKPLKRTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPV 389
D++ +K + P ++ LK+++ SAT++ ++ F+ N I + G LYPV
Sbjct: 183 DILFGLLKKLFQDKSPNRKEHLKVVVMSATMELAKLSAFFG-----NCPIFDIPGRLYPV 237
Query: 390 SVYYSN------DPVVNYVQGVVDTAIKIHESMPVGDILAFVIGLEQIEHIIGILKQ--- 440
+ N Y+Q +V + IH + GDIL F+ G +IE +L Q
Sbjct: 238 REKFCNLIGPRDRENTAYIQAIVKVTMDIHLNEMAGDILVFLTGQFEIEKSCELLFQMAE 297
Query: 441 -----YHNQREDLK-LLILPMHGSLPNNEQIKVFRPTPRAMRKIVIATNIAETSITIPGI 494
Y Q L LLILP +GS+ ++Q ++F P P +RK VI+TNI+ TS+TI GI
Sbjct: 298 SVDYDYDVQDTTLDGLLILPCYGSMTTDQQRRIFLPPPPGIRKCVISTNISATSLTIDGI 357
Query: 495 VYVIDPGFVKARWFNPNTLTNSLVVVPISKASAVQRAGRAGRVRSGHVYRKNFMYNRLFI 554
YV+D GFVK NP + L VVPISK+ A+QR+GRAGR SG +R +Y++ F
Sbjct: 358 RYVVDGGFVKQLNHNPRLGLDILEVVPISKSEALQRSGRAGRTASGKCFR---IYSKEFW 414
Query: 555 HFCVSRN-IPTI 565
C+ + IP I
Sbjct: 415 SQCMPDHVIPEI 426
Score = 129 bits (325), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 60/111 (54%), Positives = 87/111 (78%), Gaps = 2/111 (1%)
Query: 587 QYLLEAGWCYDTKLIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTK 646
+YL EAG+ +IG+T+PR+++ S+A RV+EE++ TLG VGY +RFDDC++++ T
Sbjct: 88 KYLYEAGFSQHG-MIGVTQPRKVAAISVAQRVAEEMKCTLGSKVGYQVRFDDCSSKE-TA 145
Query: 647 IKYMTEGILMREMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKILKDK 697
IKYMT+G L++ ++ DP L K+SVI+LDE HERT+ TDIL GLLKK+ +DK
Sbjct: 146 IKYMTDGCLLKHILGDPNLSKFSVIILDEAHERTLTTDILFGLLKKLFQDK 196
Score = 67.4 bits (163), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/110 (38%), Positives = 65/110 (59%), Gaps = 9/110 (8%)
Query: 41 SRKFSRLYTEASFSQLNECTP----PEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQ 96
S K R+Y++ +SQ C P PE++RT L+S VL LK L IH+++RF + PP +
Sbjct: 402 SGKCFRIYSKEFWSQ---CMPDHVIPEIKRTSLTSVVLTLKCLAIHDVIRFPYLDPPNER 458
Query: 97 NLRVALELLYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLLSSGSVLD 146
+ AL+ LY A+D +G++T+ +G +M E PL P H + + LD
Sbjct: 459 LILEALKQLYQCDAIDRSGHVTR-LGLSMVEFPLPP-HLTCAVIRAASLD 506
Score = 60.8 bits (146), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 73/155 (47%), Gaps = 9/155 (5%)
Query: 701 FECSDEIASILSLLQVQDIFIKPSSGALSLKARVLRRNFEVEQG---DLLTLLNIFKFYE 757
+C D + I ++L V+++FI+P +A R + G D TL IF+ +
Sbjct: 505 LDCEDLLLPIAAMLSVENVFIRPVDPEYQKEAEQRHRELAAKAGGFNDFATLAVIFEQCK 564
Query: 758 KQENKKQFCHKYFFNYKVLKRAAELKNQMILLLKK----SSIPLVTSPRNTNAVL-KCLT 812
+C K++ +++ L A ++ Q+ L++K S P T + VL +CL
Sbjct: 565 SSGAPASWCQKHWIHWRCLFSAFRVEAQLRELIRKLKQQSDFPRETFEGPKHEVLRRCLC 624
Query: 813 NGFFSNAAYLHYSGVYRTVRG-NEDLYIHPSSVLY 846
G+F N A + T+ G ++IHPSS L+
Sbjct: 625 AGYFKNVARRSVGRTFCTMDGRGSPVHIHPSSALH 659
Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 30/38 (78%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILM 38
MT+G L+++ DP++ K+SVI+LD+ HERT+ TDIL
Sbjct: 149 MTDGCLLKHILGDPNLSKFSVIILDEAHERTLTTDILF 186
>sp|P36009|DHR2_YEAST Probable ATP-dependent RNA helicase DHR2 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=DHR2 PE=1
SV=1
Length = 735
Score = 134 bits (338), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 78/211 (36%), Positives = 123/211 (58%), Gaps = 9/211 (4%)
Query: 338 AFAEQLKPLKRTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYYSNDP 397
F + L R L++I+ SAT+ AE+ +F+N NA IL V+G + V YY P
Sbjct: 217 GFLKSLIQGPRPDLRIIVMSATLQAEKFSEFFN-----NAPILFVEGRKFDVKQYYLKAP 271
Query: 398 VVNYVQGVVDTAIKIHESMPVGDILAFVIGLEQIEHIIGILKQ---YHNQREDLKLLI-L 453
+ V V+ I+I++ +GDIL F+ G E+I+ + I+++ Y + + L++
Sbjct: 272 TDDIVDAVIRCCIQINQGEELGDILCFLPGQEEIDKAVTIMEKIAKYVSDEAPVPLIVPY 331
Query: 454 PMHGSLPNNEQIKVFRPTPRAMRKIVIATNIAETSITIPGIVYVIDPGFVKARWFNPNTL 513
P++ +LP +Q VF P RK+V +TNIAETS+TI G+ +V+D G K + +
Sbjct: 332 PLYAALPAVQQSLVFAPIKGFKRKVVFSTNIAETSVTISGVKFVVDSGLRKVKVWRHQLG 391
Query: 514 TNSLVVVPISKASAVQRAGRAGRVRSGHVYR 544
+L+ VPIS+ASA+QR+GRAGR G +R
Sbjct: 392 LATLLTVPISQASAMQRSGRAGRESEGKSFR 422
Score = 110 bits (276), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 54/118 (45%), Positives = 84/118 (71%), Gaps = 6/118 (5%)
Query: 587 QYLLEAGWCYDTKL---IGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTED 643
Q++LE YDTK I +T+PRR++ +LA RV++E LG VGY++RFD+ TT
Sbjct: 116 QFVLEK--LYDTKKHGSIAVTQPRRVAAINLATRVAQEHGCKLGEQVGYSVRFDNTTTTR 173
Query: 644 VTKIKYMTEGILMREMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKILKDKERDF 701
T++KY+T+G+L+RE+M + LR+YSVI++DE HERT+ TD+++G LK +++ D
Sbjct: 174 -TRLKYLTDGMLLRELMMNSDLREYSVIVIDEAHERTVLTDLILGFLKSLIQGPRPDL 230
Score = 70.5 bits (171), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 64/106 (60%), Gaps = 1/106 (0%)
Query: 39 ECSRKFSRLYTEASFSQLNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNL 98
E K RLY E+ + +L + + PE+ R++++S VL LK G+ ++L +++ P + +
Sbjct: 415 ESEGKSFRLYCESDYVKLPKQSEPEIARSDVTSPVLMLKRYGVDDLLNWTWFENPGKEAI 474
Query: 99 RVALELLYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLLSSGSV 144
+ L+ LY LGA+D G +TK G+ MA +PL P + VL+ + V
Sbjct: 475 VMGLQELYELGALDTRGKITKR-GQQMALLPLQPHLSSVLIKASEV 519
Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 69/170 (40%), Gaps = 20/170 (11%)
Query: 697 KERDFECSDEIASILSLLQVQDIFIKPSSGALSL--KARVLRRNFEVEQGDLLTLLNIFK 754
K + C ++ I+S L V+++ + PS + R+ N GDL+ L +F
Sbjct: 515 KASEVGCLSQVIDIVSCLSVENLLLNPSPEERDEVNERRLSLCNAGKRYGDLIMLKELFD 574
Query: 755 FYEKQENKKQ--------FCHKYFFNYKVLKRAAELKNQMILLLKK----------SSIP 796
Y + K Q +C + + K +++Q+ + K+ S
Sbjct: 575 IYFYELGKSQDASSERNDWCKGLCISIRGFKNVIRVRDQLRVYCKRLFSSISEEDEESKK 634
Query: 797 LVTSPRNTNAVLKCLTNGFFSNAAYLHYSGVYRTVRGNEDLYIHPSSVLY 846
+ + +LKC GF N A YRTV E + IHPSS+L+
Sbjct: 635 IGEDGELISKILKCFLTGFIKNTAIGMPDRSYRTVSTGEPISIHPSSMLF 684
Score = 37.4 bits (85), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 28/38 (73%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILM 38
+T+G+L+ + + +YSVI++D+ HERT+ TD+++
Sbjct: 179 LTDGMLLRELMMNSDLREYSVIVIDEAHERTVLTDLIL 216
>sp|P45018|HRPA_HAEIN ATP-dependent RNA helicase HrpA homolog OS=Haemophilus influenzae
(strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=hrpA PE=3
SV=2
Length = 1304
Score = 132 bits (331), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 85/209 (40%), Positives = 120/209 (57%), Gaps = 21/209 (10%)
Query: 338 AFAEQLKPLKRTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYYSNDP 397
+ +QL P +R LKLII+SAT+D E + +N NA I+ V G YPV V Y P
Sbjct: 217 GYLKQLLPRRRRDLKLIITSATIDVERFSKHFN-----NAPIIEVSGRTYPVEVRYR--P 269
Query: 398 VV-----NYVQGVVDTAIKIHESMPVGDILAFVIGLEQIEHIIGILKQYHNQREDLK-LL 451
VV + +QG+++ A+ ++ GDIL F+ G +I L Q+++LK
Sbjct: 270 VVEEDDQDQLQGILN-AVDELQAEGRGDILIFMNGEREIRDTAEAL-----QKQNLKHTE 323
Query: 452 ILPMHGSLPNNEQIKVFRPTPRAMRKIVIATNIAETSITIPGIVYVIDPGFVKARWFNPN 511
ILP+ L EQ K+F P+ + +IV+ATN+AETS+T+P I YVIDPG + ++
Sbjct: 324 ILPLFARLSAQEQNKIFHPS--GLNRIVLATNVAETSLTVPSIKYVIDPGTARISRYSYR 381
Query: 512 TLTNSLVVVPISKASAVQRAGRAGRVRSG 540
T L + PIS+ASA QR GR GRV G
Sbjct: 382 TKVQRLPIEPISQASANQRKGRCGRVSEG 410
Score = 103 bits (257), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 48/103 (46%), Positives = 73/103 (70%), Gaps = 1/103 (0%)
Query: 600 LIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTKIKYMTEGILMREM 659
+IG T+PRRI+ S+A R++EEL T LG VGY +RF+D + D T+IK MT+GIL+ E+
Sbjct: 130 MIGHTQPRRIAARSVAARIAEELETELGGLVGYKVRFNDQIS-DNTQIKLMTDGILLAEI 188
Query: 660 MTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKILKDKERDFE 702
D L +YS +++DE HER++ D ++G LK++L + RD +
Sbjct: 189 QNDRFLNQYSCLIIDEAHERSLNNDFILGYLKQLLPRRRRDLK 231
Score = 66.6 bits (161), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 59/102 (57%), Gaps = 6/102 (5%)
Query: 46 RLYTEASFSQLNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRVALELL 105
RLY+E F+ E T PE+ RT L+S +LQ+ ALG+ +I F F P ++++ ++LL
Sbjct: 414 RLYSEEDFNSRPEFTDPEILRTNLASVILQMTALGLDDIEAFPFVDAPDERHIQDGVKLL 473
Query: 106 YSLGAMDV------NGNLTKPVGETMAEMPLHPIHAKVLLSS 141
LGA + L VG +A++P+ P AK++LS+
Sbjct: 474 EELGAFETVQTKSGEKRLLTRVGRQLAQLPVDPRLAKMILSA 515
Score = 53.5 bits (127), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 72/156 (46%), Gaps = 8/156 (5%)
Query: 700 DFECSDEIASILSLLQVQDIFIKPSSGALSLKARVLRRNFEVEQGDLLTLLNIFKFYEKQ 759
+F C E+ I+S L +QD +P + + R F ++ D L LN++++ ++Q
Sbjct: 517 NFGCVYEMMIIVSALSIQDPRERPQEKQQASDEK--HRRFADKKSDFLAFLNLWRYLQEQ 574
Query: 760 E---NKKQF---CHKYFFNYKVLKRAAELKNQMILLLKKSSIPLVTSPRNTNAVLKCLTN 813
+ +K QF C K F NY ++ ++ +Q+ L +++ S+P+ + + L +
Sbjct: 575 QKESSKNQFRRQCQKDFLNYLRIREWQDIYHQIRLTVREMSLPINSEKAEYQQIHTALLS 634
Query: 814 GFFSNAAYLHYSGVYRTVRGNEDLYIHPSSVLYTLQ 849
G S+ N I P+SVL+ Q
Sbjct: 635 GLLSHIGLKEAEKQQYLGARNAHFAIFPNSVLFKKQ 670
Score = 34.3 bits (77), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 26/38 (68%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILM 38
MT+GIL+ +D + +YS +++D+ HER++ D ++
Sbjct: 179 MTDGILLAEIQNDRFLNQYSCLIIDEAHERSLNNDFIL 216
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.138 0.404
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 306,564,279
Number of Sequences: 539616
Number of extensions: 12861549
Number of successful extensions: 31560
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 128
Number of HSP's successfully gapped in prelim test: 78
Number of HSP's that attempted gapping in prelim test: 30575
Number of HSP's gapped (non-prelim): 696
length of query: 858
length of database: 191,569,459
effective HSP length: 126
effective length of query: 732
effective length of database: 123,577,843
effective search space: 90458981076
effective search space used: 90458981076
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 66 (30.0 bits)