Your job contains 1 sequence.
>psy2470
MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILMECSRKFSRLYTEASFSQLNECT
PPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRVALELLYSLGAMDVNGNLTKP
VGETMAEMPLHPIHAKVLLSSGSVLDSAVEILLHRLRGLCDNVDSGPETFHDHEMCFSIR
GNQTQPLLLRVRRALDFPDMPYQLRYIGQPEMGPLLLRVRRALDFPDMPYQLRYIGQPEM
GVGDKARPTIVRSSIDVACSCTVVEFLTEMGCRMDFEYISRGYMFRKGRMKILVSKIFKM
SQGKPSDSGVEPISQSYLVELSILAPGGQDVIGEDMKAFAEQLKPLKRTQLKLIISSATV
DAEEICQFYNISASSNATILSVKGHLYPVSVYYSNDPVVNYVQGVVDTAIKIHESMPVGD
ILAFVIGLEQIEHIIGILKQYHNQREDLKLLILPMHGSLPNNEQIKVFRPTPRAMRKIVI
ATNIAETSITIPGIVYVIDPGFVKARWFNPNTLTNSLVVVPISKASAVQRAGRAGRVRSG
HVYRKNFMYNRLFIHFCVSRNIPTIPNDPKDVKCDVMFHKVFFSFFQYLLEAGWCYDTKL
IGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTKIKYMTEGILMREMM
TDPLLRKYSVIMLDEVHERTIFTDILMGLLKKILKDKERDFECSDEIASILSLLQVQDIF
IKPSSGALSLKARVLRRNFEVEQGDLLTLLNIFKFYEKQENKKQFCHKYFFNYKVLKRAA
ELKNQMILLLKKSSIPLVTSPRNTNAVLKCLTNGFFSNAAYLHYSGVYRTVRGNEDLYIH
PSSVLYTLQQPQCTHLEG
The BLAST search returned 4 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy2470
(858 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0031631 - symbol:CG3225 species:7227 "Drosophila m... 473 4.6e-82 3
UNIPROTKB|D3ZZG1 - symbol:Dhx35 "Protein Dhx35" species:1... 415 1.2e-74 3
UNIPROTKB|F1SDW0 - symbol:DHX35 "Uncharacterized protein"... 417 1.6e-74 3
ZFIN|ZDB-GENE-070410-11 - symbol:zgc:158828 "zgc:158828" ... 424 1.6e-74 3
UNIPROTKB|E1BDN4 - symbol:DHX35 "Uncharacterized protein"... 417 6.1e-74 3
UNIPROTKB|F5GXM6 - symbol:DHX35 "Probable ATP-dependent R... 415 1.1e-73 3
UNIPROTKB|Q9H5Z1 - symbol:DHX35 "Probable ATP-dependent R... 415 2.2e-73 3
UNIPROTKB|E1C4U5 - symbol:DHX35 "Uncharacterized protein"... 411 3.4e-71 3
RGD|1311165 - symbol:Dhx35 "DEAH (Asp-Glu-Ala-His) box po... 415 2.2e-68 3
UNIPROTKB|E2RQN7 - symbol:DHX35 "Uncharacterized protein"... 416 6.0e-68 3
UNIPROTKB|E2RQN1 - symbol:DHX35 "Uncharacterized protein"... 416 3.8e-67 3
UNIPROTKB|Q5THR1 - symbol:DHX35 "Probable ATP-dependent R... 415 4.0e-67 3
DICTYBASE|DDB_G0269306 - symbol:dhx35 "DEAD/DEAH box heli... 383 1.7e-60 4
WB|WBGene00022056 - symbol:Y67D2.6 species:6239 "Caenorha... 353 2.2e-59 3
DICTYBASE|DDB_G0285937 - symbol:dhx16 "putative RNA splic... 363 1.0e-58 3
POMBASE|SPAC20H4.09 - symbol:SPAC20H4.09 "ATP-dependent R... 362 1.4e-58 3
UNIPROTKB|F5H658 - symbol:DHX8 "ATP-dependent RNA helicas... 371 2.8e-55 3
FB|FBgn0086444 - symbol:l(2)37Cb "lethal (2) 37Cb" specie... 376 4.2e-55 3
ZFIN|ZDB-GENE-050809-39 - symbol:dhx8 "DEAH (Asp-Glu-Ala-... 378 1.2e-54 3
FB|FBgn0086895 - symbol:pea "peanuts" species:7227 "Droso... 370 2.5e-54 3
RGD|1310723 - symbol:Dhx8 "DEAH (Asp-Glu-Ala-His) box pol... 371 2.7e-54 3
UNIPROTKB|F1S1H3 - symbol:DHX8 "Uncharacterized protein" ... 371 2.8e-54 3
UNIPROTKB|E2R9R9 - symbol:DHX8 "Uncharacterized protein" ... 371 2.8e-54 3
UNIPROTKB|Q14562 - symbol:DHX8 "ATP-dependent RNA helicas... 371 2.9e-54 3
UNIPROTKB|F1MEM4 - symbol:DHX8 "Uncharacterized protein" ... 371 3.0e-54 3
UNIPROTKB|D4A805 - symbol:Dhx8 "Protein Dhx8" species:101... 371 3.1e-54 3
MGI|MGI:1306823 - symbol:Dhx8 "DEAH (Asp-Glu-Ala-His) box... 371 3.2e-54 3
UNIPROTKB|F1P306 - symbol:LOC100858239 "Uncharacterized p... 371 4.7e-54 3
UNIPROTKB|E1BYA5 - symbol:DHX33 "Uncharacterized protein"... 339 9.0e-54 3
POMBASE|SPBC19C2.01 - symbol:cdc28 "ATP-dependent RNA hel... 370 1.5e-53 3
UNIPROTKB|F1PRA1 - symbol:DHX33 "Uncharacterized protein"... 345 2.4e-53 3
UNIPROTKB|G4MKC3 - symbol:MGG_02518 "ATP-dependent RNA he... 356 3.4e-53 3
RGD|1302963 - symbol:Dhx16 "DEAH (Asp-Glu-Ala-His) box po... 365 4.1e-53 4
ZFIN|ZDB-GENE-030131-8589 - symbol:dhx16 "DEAH (Asp-Glu-A... 364 7.0e-53 3
SGD|S000000815 - symbol:PRP22 "DEAH-box RNA-dependent ATP... 366 9.2e-53 2
UNIPROTKB|O60231 - symbol:DHX16 "Putative pre-mRNA-splici... 365 1.3e-52 4
UNIPROTKB|Q5SQH5 - symbol:DHX16 "Putative pre-mRNA-splici... 365 1.4e-52 4
UNIPROTKB|Q5JP46 - symbol:DHX16 "Putative pre-mRNA-splici... 364 1.8e-52 4
UNIPROTKB|E1BF68 - symbol:DHX16 "Uncharacterized protein"... 366 2.1e-52 4
UNIPROTKB|F1PGL2 - symbol:DHX16 "Uncharacterized protein"... 365 2.7e-52 4
UNIPROTKB|F1RU83 - symbol:DHX16 "Putative pre-mRNA-splici... 365 2.8e-52 4
UNIPROTKB|Q767K6 - symbol:DHX16 "Putative pre-mRNA-splici... 365 2.8e-52 4
UNIPROTKB|G4NHA6 - symbol:MGG_03893 "Pre-mRNA-splicing fa... 317 4.0e-52 3
UNIPROTKB|G4N1N4 - symbol:MGG_07501 "ATP-dependent RNA he... 382 4.8e-52 4
TAIR|locus:2033723 - symbol:ESP3 "ENHANCED SILENCING PHEN... 380 4.8e-52 4
TAIR|locus:2062492 - symbol:MEE29 "maternal effect embryo... 373 1.0e-51 3
UNIPROTKB|F1MWZ4 - symbol:F1MWZ4 "Uncharacterized protein... 331 2.2e-51 3
TAIR|locus:2088847 - symbol:AT3G26560 species:3702 "Arabi... 346 2.3e-51 3
SGD|S000003088 - symbol:PRP43 "RNA helicase in the DEAH-b... 353 2.8e-51 3
UNIPROTKB|I3L1L6 - symbol:DHX33 "Putative ATP-dependent R... 333 2.8e-51 3
MGI|MGI:2445102 - symbol:Dhx33 "DEAH (Asp-Glu-Ala-His) bo... 335 3.3e-51 3
CGD|CAL0002409 - symbol:orf19.5865 species:5476 "Candida ... 390 7.5e-51 3
UNIPROTKB|Q9H6R0 - symbol:DHX33 "Putative ATP-dependent R... 333 1.0e-50 3
DICTYBASE|DDB_G0291183 - symbol:dhx8 "putative RNA splici... 378 1.4e-50 2
WB|WBGene00003392 - symbol:mog-4 species:6239 "Caenorhabd... 355 2.1e-50 3
UNIPROTKB|O45244 - symbol:mog-4 "Probable pre-mRNA-splici... 355 2.1e-50 3
POMBASE|SPBC16H5.10c - symbol:prp43 "ATP-dependent RNA he... 351 4.8e-50 3
ASPGD|ASPL0000059403 - symbol:AN0133 species:162425 "Emer... 336 6.0e-50 3
WB|WBGene00003389 - symbol:mog-1 species:6239 "Caenorhabd... 345 1.5e-49 3
UNIPROTKB|P34498 - symbol:mog-1 "Probable pre-mRNA-splici... 345 1.5e-49 3
ASPGD|ASPL0000006947 - symbol:AN5827 species:162425 "Emer... 381 4.2e-49 4
WB|WBGene00003393 - symbol:mog-5 species:6239 "Caenorhabd... 375 6.0e-49 2
UNIPROTKB|Q09530 - symbol:mog-5 "Probable pre-mRNA-splici... 375 6.0e-49 2
CGD|CAL0000153 - symbol:orf19.1687 species:5476 "Candida ... 346 8.3e-49 3
SGD|S000001794 - symbol:PRP16 "DEAH-box RNA helicase invo... 317 1.3e-48 3
POMBASE|SPAC10F6.02c - symbol:prp22 "ATP-dependent RNA he... 383 1.7e-48 2
UNIPROTKB|G4NFJ0 - symbol:MGG_08807 "Pre-mRNA-splicing fa... 368 2.8e-48 2
UNIPROTKB|G4MTU4 - symbol:MGG_11351 "Pre-mRNA-splicing fa... 326 5.2e-48 3
TAIR|locus:2197965 - symbol:AT1G26370 species:3702 "Arabi... 356 5.2e-48 3
CGD|CAL0004768 - symbol:PRP22 species:5476 "Candida albic... 365 6.5e-48 3
ZFIN|ZDB-GENE-030131-650 - symbol:dhx15 "DEAH (Asp-Glu-Al... 308 9.9e-48 4
POMBASE|SPBC1711.17 - symbol:prp16 "ATP-dependent RNA hel... 319 3.4e-47 3
UNIPROTKB|F1NHI3 - symbol:DHX15 "Uncharacterized protein"... 305 4.2e-47 4
UNIPROTKB|A5D7D9 - symbol:DHX15 "Uncharacterized protein"... 306 4.6e-47 4
UNIPROTKB|E2R2U3 - symbol:DHX15 "Uncharacterized protein"... 306 4.6e-47 4
UNIPROTKB|O43143 - symbol:DHX15 "Putative pre-mRNA-splici... 306 4.6e-47 4
UNIPROTKB|F1S5A8 - symbol:DHX15 "Uncharacterized protein"... 306 4.6e-47 4
MGI|MGI:1099786 - symbol:Dhx15 "DEAH (Asp-Glu-Ala-His) bo... 306 4.6e-47 4
RGD|1308072 - symbol:Dhx15 "DEAH (Asp-Glu-Ala-His) box po... 306 4.6e-47 4
ASPGD|ASPL0000014477 - symbol:AN4032 species:162425 "Emer... 312 9.9e-47 3
DICTYBASE|DDB_G0285843 - symbol:helD "putative RNA splici... 327 2.7e-46 3
WB|WBGene00018967 - symbol:F56D2.6 species:6239 "Caenorha... 292 1.1e-45 3
UNIPROTKB|Q20875 - symbol:F56D2.6 "Putative pre-mRNA-spli... 292 1.1e-45 3
ASPGD|ASPL0000070923 - symbol:AN4721 species:162425 "Emer... 357 3.1e-45 2
TAIR|locus:2095989 - symbol:AT3G62310 species:3702 "Arabi... 352 3.9e-45 2
POMBASE|SPAC2G11.11c - symbol:prh1 "ATP-dependent RNA hel... 339 9.8e-45 2
TAIR|locus:2065210 - symbol:AT2G47250 species:3702 "Arabi... 350 1.4e-44 2
UNIPROTKB|F1S3A8 - symbol:DHX38 "Uncharacterized protein"... 332 1.7e-44 3
ASPGD|ASPL0000052850 - symbol:AN1363 species:162425 "Emer... 344 4.0e-44 2
UNIPROTKB|F1NWM3 - symbol:DHX40 "Uncharacterized protein"... 316 4.5e-44 3
GENEDB_PFALCIPARUM|PF10_0294 - symbol:PF10_0294 "RNA heli... 338 5.2e-44 3
UNIPROTKB|Q8IJA4 - symbol:PF10_0294 "RNA helicase, putati... 338 5.2e-44 3
ZFIN|ZDB-GENE-040426-1144 - symbol:dhx38 "DEAH (Asp-Glu-A... 331 8.4e-44 3
FB|FBgn0026713 - symbol:l(1)G0007 "lethal (1) G0007" spec... 310 1.0e-43 3
DICTYBASE|DDB_G0285213 - symbol:dhx15 "putative RNA splic... 336 1.6e-43 2
FB|FBgn0033160 - symbol:CG11107 species:7227 "Drosophila ... 337 2.5e-43 2
UNIPROTKB|Q92620 - symbol:DHX38 "Pre-mRNA-splicing factor... 331 3.2e-43 3
CGD|CAL0005059 - symbol:orf19.2818 species:5476 "Candida ... 299 3.4e-43 3
UNIPROTKB|E2RC56 - symbol:DHX38 "Uncharacterized protein"... 331 4.0e-43 3
UNIPROTKB|Q17R09 - symbol:DHX38 "Pre-mRNA-splicing factor... 332 6.4e-43 3
WARNING: Descriptions of 218 database sequences were not reported due to the
limiting value of parameter V = 100.
>FB|FBgn0031631 [details] [associations]
symbol:CG3225 species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC;ISS]
[GO:0005681 "spliceosomal complex" evidence=ISS] [GO:0003724 "RNA
helicase activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0071011 "precatalytic
spliceosome" evidence=IDA] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 EMBL:AE014134 GO:GO:0006200
GO:GO:0003676 GO:GO:0004386 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GO:GO:0016779 GeneTree:ENSGT00700000104241 KO:K13117 OMA:NIFVVPP
EMBL:AY069418 RefSeq:NP_608860.1 UniGene:Dm.300 SMR:Q9VR29
DIP:DIP-18193N IntAct:Q9VR29 MINT:MINT-288733
EnsemblMetazoa:FBtr0077416 GeneID:33680 KEGG:dme:Dmel_CG3225
UCSC:CG3225-RA FlyBase:FBgn0031631 InParanoid:Q9VR29
OrthoDB:EOG4H189P GenomeRNAi:33680 NextBio:784751 Uniprot:Q9VR29
Length = 678
Score = 473 (171.6 bits), Expect = 4.6e-82, Sum P(3) = 4.6e-82
Identities = 91/199 (45%), Positives = 132/199 (66%)
Query: 347 KRTQLKLIISSATVDAEEICQFYNISASSNATI-LSVKGHLYPVSVYYSNDPVVNYVQGV 405
KR+ LKLIISSAT+DA +F++ S ++ LS++G ++PVS +Y N+P +YV+
Sbjct: 189 KRSSLKLIISSATIDASFFSEFFSWPGSGEVSVKLSIEGRMHPVSNFYLNEPCADYVKET 248
Query: 406 VDTAIKIHESMPVGDILAFVIGLEQIEHIIGILKQYHNQREDLKLLILPMHGSLPNNEQI 465
V+T K+H+ P GDILAF+ G E++ + +L++Y E L +LPM+GS+ + +Q+
Sbjct: 249 VETVWKLHQKEPPGDILAFLTGQEEVLEALDLLREYIASSEQENLKVLPMYGSMSSTDQL 308
Query: 466 KVFRPTPRAMRKIVIATNIAETSITIPGIVYVIDPGFVKARWFNPNTLTNSLVVVPISKX 525
VF P+ RK+V+ATNIAETSITIPGIVYVID G+VK +W+NP T ++SLV+VP+SK
Sbjct: 309 SVFFTPPKGTRKVVLATNIAETSITIPGIVYVIDCGYVKVKWYNPKTCSDSLVIVPVSKA 368
Query: 526 XXXXXXXXXXXXXXXHVYR 544
VYR
Sbjct: 369 SAIQRAGRAGRMRPGKVYR 387
Score = 350 (128.3 bits), Expect = 4.6e-82, Sum P(3) = 4.6e-82
Identities = 67/151 (44%), Positives = 97/151 (64%)
Query: 703 CSDEIASILSLLQVQDIFIKPSSGALSLKARVLRRNFEVEQGDLLTLLNIFKFYEKQENK 762
CS+EI +I++LLQVQ IF +P+S R+ R FEV +GD +T+LN + + ++
Sbjct: 487 CSEEIITIIALLQVQSIFSRPASAVAQQSGRIAHRKFEVAEGDFITMLNAYTGFVEEGMT 546
Query: 763 KQFCHKYFFNYKVLKRAAELKNQMILLL-KKSSIPLVTSPRNTNAVLKCLTNGFFSNAAY 821
K+FC +YF Y+ LKRA L+ Q+I + KK IP+ + + + KC+T GFF+ AY
Sbjct: 547 KEFCGQYFLIYRNLKRAHSLREQLITVARKKYGIPIFSCKGDVEKLCKCITAGFFTQVAY 606
Query: 822 LHYSGVYRTVRGNEDLYIHPSSVLYTLQQPQ 852
LH+SGVYR + +L IHP+S LYTL Q Q
Sbjct: 607 LHHSGVYRQISSGTELAIHPNSTLYTLPQAQ 637
Score = 331 (121.6 bits), Expect = 1.7e-26, P = 1.7e-26
Identities = 80/183 (43%), Positives = 116/183 (63%)
Query: 587 QYLLEAGWCYDTK-LIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVT 645
QYL E GW TK LIGITEPRR+S +LANRV++E +G TVGY +RF + + T
Sbjct: 82 QYLYEWGW--HTKGLIGITEPRRVSTVTLANRVAQERGELVGDTVGYVVRFLE-SMSSCT 138
Query: 646 KIKYMTEGILMREMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKILKDKERDFECSD 705
KIK+MTEGIL+RE++ DPLL +Y VI++DE HER + TD+++GLLKKIL+ K +
Sbjct: 139 KIKFMTEGILLREVLADPLLTQYGVIIVDEAHERNMLTDMILGLLKKILR-KRSSLKLII 197
Query: 706 EIASILSLLQVQDIFIKPSSGALSLKARVLRR-----NFEVEQ--GDLL--TLLNIFKFY 756
A+I + + F P SG +S+K + R NF + + D + T+ ++K +
Sbjct: 198 SSATIDASF-FSEFFSWPGSGEVSVKLSIEGRMHPVSNFYLNEPCADYVKETVETVWKLH 256
Query: 757 EKQ 759
+K+
Sbjct: 257 QKE 259
Score = 293 (108.2 bits), Expect = 3.5e-60, Sum P(3) = 3.5e-60
Identities = 60/102 (58%), Positives = 75/102 (73%)
Query: 43 KFSRLYTEASFSQLNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRVAL 102
K RLYT++ + L PPEM+R+ELS A+LQLKALGI NILRF FPSPPPAQNL AL
Sbjct: 384 KVYRLYTKSDYEALAPRQPPEMRRSELSGAILQLKALGIGNILRFDFPSPPPAQNLLSAL 443
Query: 103 ELLYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLLSSGSV 144
E L++L A+D GNLTKPVG +AE+P + +K+L SG +
Sbjct: 444 ESLFALDAIDEQGNLTKPVGYLLAELPFSAMLSKMLYVSGQM 485
Score = 98 (39.6 bits), Expect = 4.6e-82, Sum P(3) = 4.6e-82
Identities = 19/46 (41%), Positives = 30/46 (65%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILMECSRKFSR 46
MTEGIL+ DP + +Y VI++D+ HER + TD+++ +K R
Sbjct: 143 MTEGILLREVLADPLLTQYGVIIVDEAHERNMLTDMILGLLKKILR 188
Score = 45 (20.9 bits), Expect = 2.1e-28, Sum P(3) = 2.1e-28
Identities = 9/19 (47%), Positives = 14/19 (73%)
Query: 434 IIGILKQYHNQREDLKLLI 452
I+G+LK+ +R LKL+I
Sbjct: 179 ILGLLKKILRKRSSLKLII 197
Score = 41 (19.5 bits), Expect = 4.4e-76, Sum P(3) = 4.4e-76
Identities = 11/28 (39%), Positives = 17/28 (60%)
Query: 242 VGDKARPTIVRSSIDVACSCTVVEFLTE 269
VGD +VR ++ SCT ++F+TE
Sbjct: 120 VGDTVG-YVVRF-LESMSSCTKIKFMTE 145
Score = 37 (18.1 bits), Expect = 6.3e-27, Sum P(3) = 6.3e-27
Identities = 9/27 (33%), Positives = 15/27 (55%)
Query: 341 EQLKPLKRTQLKLIISSATVDAEEICQ 367
EQL + R + + I S D E++C+
Sbjct: 568 EQLITVARKKYGIPIFSCKGDVEKLCK 594
>UNIPROTKB|D3ZZG1 [details] [associations]
symbol:Dhx35 "Protein Dhx35" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1311165 GO:GO:0005524 GO:GO:0003676 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 IPI:IPI00951610
Ensembl:ENSRNOT00000068625 OrthoDB:EOG4V9TQ5 ArrayExpress:D3ZZG1
Uniprot:D3ZZG1
Length = 703
Score = 415 (151.1 bits), Expect = 1.2e-74, Sum P(3) = 1.2e-74
Identities = 85/187 (45%), Positives = 127/187 (67%)
Query: 347 KRTQLKLIISSATVDAEEICQFYNISASSN-----ATILSVKGHLYPVSVYYSNDPVVNY 401
KR L+LI++SAT+DAE+ F+N + +S+ IL+V+G +PV ++Y PV +Y
Sbjct: 198 KRGDLRLIVASATLDAEKFRDFFNQNETSDPARDTCVILTVEGRTFPVDIFYLQSPVPDY 257
Query: 402 VQGVVDTAIKIHESMPVGDILAFVIGLEQIEHIIGILKQYHNQ--REDLK--LLILPMHG 457
++ VDT +KIH++ GDILAF+ G E++E ++ +L + R +K L +LPM+
Sbjct: 258 IKATVDTVVKIHQTEGDGDILAFLTGQEEVETVVSMLIEQARALARTGMKKHLRVLPMYA 317
Query: 458 SLPNNEQIKVFRPTPRAMRKIVIATNIAETSITIPGIVYVIDPGFVKARWFNPNTLTNSL 517
LP+ EQ+KVF ++RK+++ATN+AETSITI GIVYVID GF+K R +NP T L
Sbjct: 318 GLPSFEQMKVFERVSHSVRKVIVATNVAETSITISGIVYVIDCGFMKLRAYNPRTAIECL 377
Query: 518 VVVPISK 524
VVVP+S+
Sbjct: 378 VVVPVSQ 384
Score = 366 (133.9 bits), Expect = 1.2e-61, Sum P(2) = 1.2e-61
Identities = 65/111 (58%), Positives = 88/111 (79%)
Query: 587 QYLLEAGWCYDTKLIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTK 646
QYL EAGW + +++G+T+PRR++ ++A RV++E LGH VGY IRFDDCT T+
Sbjct: 89 QYLAEAGWTAEGRVVGVTQPRRVAAVTVAGRVADERGAVLGHEVGYCIRFDDCTDPLATR 148
Query: 647 IKYMTEGILMREMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKILKDK 697
IK++T+G+L+REMM DPLL KYSV+MLDE HERT++TDI +GLLKKI K +
Sbjct: 149 IKFLTDGMLVREMMVDPLLTKYSVVMLDEAHERTLYTDIAIGLLKKIQKKR 199
Score = 345 (126.5 bits), Expect = 1.2e-74, Sum P(3) = 1.2e-74
Identities = 66/153 (43%), Positives = 105/153 (68%)
Query: 700 DFECSDEIASILSLLQVQDIFIKPSSGALSLKARVLRRNFEVEQGDLLTLLNIFKFYEKQ 759
+F CS EI SI +++Q+Q++F+ PS+ S RV R F VE+GD LT+LN+++ + K
Sbjct: 501 NFGCSQEILSIAAMMQIQNVFVFPSNQK-SQATRV-HRKFAVEEGDHLTMLNVYEAFIKH 558
Query: 760 ENKKQFCHKYFFNYKVLKRAAELKNQMILLLKKSSIPLVTSPRNTNAVLKCLTNGFFSNA 819
Q+C ++F NYK L RAA +++Q+ LL K +P ++S + + VL+C+ +GFF+NA
Sbjct: 559 NKSSQWCQEHFLNYKGLVRAATVRDQLKKLLVKFQVPKMSSEGDPDPVLRCIVSGFFANA 618
Query: 820 AYLHYSGVYRTVRGNEDLYIHPSSVLYTLQQPQ 852
A H +G YRT+R + +L+IHP+SVLY + P+
Sbjct: 619 ARFHSTGAYRTIRDDHELHIHPASVLYAEKPPR 651
Score = 294 (108.6 bits), Expect = 6.5e-61, Sum P(3) = 6.5e-61
Identities = 63/112 (56%), Positives = 82/112 (73%)
Query: 41 SRKFSRLYTEASFSQLNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRV 100
S K RLYTE +F QL + T PEMQR+ L+ VLQLKALGI ++LRF F SPPPAQ++
Sbjct: 399 SGKCYRLYTEEAFEQLPQSTVPEMQRSNLAPVVLQLKALGIDSVLRFHFMSPPPAQSMVQ 458
Query: 101 ALELLYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLLSSGSVLDSAVEIL 152
ALELLY+LG +D + LT+P+G +AE PL+P+ AK+LL SG+ + EIL
Sbjct: 459 ALELLYALGGLDKDCRLTEPLGMRIAEFPLNPMFAKMLLESGN-FGCSQEIL 509
Score = 111 (44.1 bits), Expect = 1.2e-74, Sum P(3) = 1.2e-74
Identities = 20/46 (43%), Positives = 32/46 (69%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILMECSRKFSR 46
+T+G+L+ DP + KYSV+MLD+ HERT++TDI + +K +
Sbjct: 152 LTDGMLVREMMVDPLLTKYSVVMLDEAHERTLYTDIAIGLLKKIQK 197
Score = 46 (21.3 bits), Expect = 7.6e-28, Sum P(2) = 7.6e-28
Identities = 8/18 (44%), Positives = 14/18 (77%)
Query: 435 IGILKQYHNQREDLKLLI 452
IG+LK+ +R DL+L++
Sbjct: 189 IGLLKKIQKKRGDLRLIV 206
Score = 40 (19.1 bits), Expect = 1.4e-28, Sum P(3) = 1.4e-28
Identities = 6/13 (46%), Positives = 9/13 (69%)
Query: 385 HLYPVSVYYSNDP 397
H++P SV Y+ P
Sbjct: 637 HIHPASVLYAEKP 649
>UNIPROTKB|F1SDW0 [details] [associations]
symbol:DHX35 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 OMA:NIFVVPP EMBL:CU442751
Ensembl:ENSSSCT00000008044 Uniprot:F1SDW0
Length = 719
Score = 417 (151.9 bits), Expect = 1.6e-74, Sum P(3) = 1.6e-74
Identities = 88/207 (42%), Positives = 130/207 (62%)
Query: 347 KRTQLKLIISSATVDAEEICQFYNISASSN-----ATILSVKGHLYPVSVYYSNDPVVNY 401
KR L+LI++SAT+DAE+ F+N + +S+ IL+V+G +PV ++Y PV +Y
Sbjct: 198 KRGDLRLIVASATLDAEKFRDFFNQNDTSDPPRDTCVILTVEGRTFPVDIFYLQSPVPDY 257
Query: 402 VQGVVDTAIKIHESMPVGDILAFVIGLEQIEHIIGILKQYHNQ--REDLK--LLILPMHG 457
++ V+T +KIH++ GDILAF+ G E++E ++ +L + R +K L +LPM+
Sbjct: 258 IKSTVETVMKIHQTEGDGDILAFLTGQEEVETVVSMLIEQARALGRTGMKRHLRVLPMYA 317
Query: 458 SLPNNEQIKVFRPTPRAMRKIVIATNIAETSITIPGIVYVIDPGFVKARWFNPNTLTNSL 517
LP+ EQ+KVF R++RK+++ATN+AETSITI GIVYVID GFVK R +NP T L
Sbjct: 318 GLPSFEQMKVFERVSRSVRKVIVATNVAETSITISGIVYVIDCGFVKLRAYNPRTAIECL 377
Query: 518 VVVPISKXXXXXXXXXXXXXXXXHVYR 544
VVVP+S+ YR
Sbjct: 378 VVVPVSQASANQRAGRAGRSRSGKCYR 404
Score = 366 (133.9 bits), Expect = 1.1e-61, Sum P(2) = 1.1e-61
Identities = 66/111 (59%), Positives = 87/111 (78%)
Query: 587 QYLLEAGWCYDTKLIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTK 646
QYL EAGW + +++G+T+PRR++ ++A RV+EE LGH VGY IRFDDCT T+
Sbjct: 89 QYLAEAGWTAEGRVVGVTQPRRVAAVTVAGRVAEERGAVLGHEVGYCIRFDDCTDPLATR 148
Query: 647 IKYMTEGILMREMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKILKDK 697
IK++T+G+L+REMM DPLL KYS IMLDE HERT++TDI +GLLKKI K +
Sbjct: 149 IKFLTDGMLVREMMVDPLLTKYSAIMLDEAHERTLYTDIAIGLLKKIQKKR 199
Score = 346 (126.9 bits), Expect = 1.6e-74, Sum P(3) = 1.6e-74
Identities = 68/153 (44%), Positives = 104/153 (67%)
Query: 700 DFECSDEIASILSLLQVQDIFIKPSSGALSLKARVLRRNFEVEQGDLLTLLNIFKFYEKQ 759
+F CS EI SI +++Q+Q+IF+ PS+ S RV R F VE+GD LT+LN+++ + K
Sbjct: 501 NFGCSQEILSIAAMMQIQNIFVVPSNQK-SQAIRV-HRKFAVEEGDHLTMLNVYEAFIKH 558
Query: 760 ENKKQFCHKYFFNYKVLKRAAELKNQMILLLKKSSIPLVTSPRNTNAVLKCLTNGFFSNA 819
Q+C ++F NYK L RAA ++ Q+ LL K +P +S + + VL+C+ +GFF+NA
Sbjct: 559 NKNSQWCQEHFLNYKGLVRAATVREQLKKLLVKFQVPKKSSEGDPDPVLRCIVSGFFANA 618
Query: 820 AYLHYSGVYRTVRGNEDLYIHPSSVLYTLQQPQ 852
A H +GVYRT+R + +L+IHP+SVLY + P+
Sbjct: 619 ARFHSTGVYRTIRDDHELHIHPASVLYAEKPPR 651
Score = 297 (109.6 bits), Expect = 6.0e-61, Sum P(3) = 6.0e-61
Identities = 63/112 (56%), Positives = 82/112 (73%)
Query: 41 SRKFSRLYTEASFSQLNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRV 100
S K RLYTE +F QL + T PEMQR+ L+ +LQLKALGI N+LRF F SPPPAQ++
Sbjct: 399 SGKCYRLYTEDAFDQLPQSTVPEMQRSNLAPVILQLKALGIDNVLRFHFMSPPPAQSMVQ 458
Query: 101 ALELLYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLLSSGSVLDSAVEIL 152
ALELLY+LG +D + LT+P+G +AE PL+P+ AK+LL SG+ + EIL
Sbjct: 459 ALELLYALGGLDKDCRLTEPLGMRIAEFPLNPMFAKMLLESGN-FGCSQEIL 509
Score = 108 (43.1 bits), Expect = 1.6e-74, Sum P(3) = 1.6e-74
Identities = 20/46 (43%), Positives = 31/46 (67%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILMECSRKFSR 46
+T+G+L+ DP + KYS IMLD+ HERT++TDI + +K +
Sbjct: 152 LTDGMLVREMMVDPLLTKYSAIMLDEAHERTLYTDIAIGLLKKIQK 197
Score = 46 (21.3 bits), Expect = 6.6e-28, Sum P(2) = 6.6e-28
Identities = 8/18 (44%), Positives = 14/18 (77%)
Query: 435 IGILKQYHNQREDLKLLI 452
IG+LK+ +R DL+L++
Sbjct: 189 IGLLKKIQKKRGDLRLIV 206
Score = 40 (19.1 bits), Expect = 1.5e-28, Sum P(3) = 1.5e-28
Identities = 6/13 (46%), Positives = 9/13 (69%)
Query: 385 HLYPVSVYYSNDP 397
H++P SV Y+ P
Sbjct: 637 HIHPASVLYAEKP 649
>ZFIN|ZDB-GENE-070410-11 [details] [associations]
symbol:zgc:158828 "zgc:158828" species:7955 "Danio
rerio" [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 ZFIN:ZDB-GENE-070410-11
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 HOVERGEN:HBG039428 OrthoDB:EOG4V9TQ5
EMBL:BC117646 IPI:IPI00851766 UniGene:Dr.86097 Uniprot:Q1ECW4
Length = 691
Score = 424 (154.3 bits), Expect = 1.6e-74, Sum P(3) = 1.6e-74
Identities = 86/187 (45%), Positives = 129/187 (68%)
Query: 347 KRTQLKLIISSATVDAEEICQFYNISASSNAT-----ILSVKGHLYPVSVYYSNDPVVNY 401
KR L+LI++SAT+DA++ F+N++ S +A+ IL+V+G +PV ++Y+ PV +Y
Sbjct: 188 KRRDLRLIVASATLDAKKFQDFFNLNESGDASKDTCGILTVEGRTFPVDIFYTVSPVPDY 247
Query: 402 VQGVVDTAIKIHESMPVGDILAFVIGLEQIEHIIGILKQYHN--QREDLK--LLILPMHG 457
V+ V+T +KIHE+ GD+LAF+ G E++E ++ +L++ R +K L +LPM+
Sbjct: 248 VKATVETVLKIHETEDDGDVLAFLTGQEEVEKVVSLLQEQARTLSRYGMKKHLCVLPMYA 307
Query: 458 SLPNNEQIKVFRPTPRAMRKIVIATNIAETSITIPGIVYVIDPGFVKARWFNPNTLTNSL 517
LP NEQ++VF +RK+V+ATNIAETSITI G+V+VID FVK R +NP T SL
Sbjct: 308 GLPYNEQMRVFERMAPTVRKVVVATNIAETSITINGVVFVIDCAFVKIRAYNPRTAIESL 367
Query: 518 VVVPISK 524
+V PISK
Sbjct: 368 IVTPISK 374
Score = 410 (149.4 bits), Expect = 3.1e-35, P = 3.1e-35
Identities = 82/143 (57%), Positives = 106/143 (74%)
Query: 587 QYLLEAGWCYDTKLIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTK 646
QYLLEAGW + K+IG+T+PRR++ TS+A RV+EE LGH VGYTIRFDDC+ T+
Sbjct: 79 QYLLEAGWAAEGKVIGVTQPRRVAATSVATRVAEERGAFLGHEVGYTIRFDDCSDPHATR 138
Query: 647 IKYMTEGILMREMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKILKDKERDFECSDE 706
IK++T+G+L+REMM+DPLL+KYSV++LDE HERT++TDI +GLLKKILK K RD
Sbjct: 139 IKFLTDGMLVREMMSDPLLKKYSVLILDEAHERTLYTDIAIGLLKKILK-KRRDLRLIVA 197
Query: 707 IASILSLLQVQDIFIKPSSGALS 729
A+ L + QD F SG S
Sbjct: 198 SAT-LDAKKFQDFFNLNESGDAS 219
Score = 335 (123.0 bits), Expect = 1.6e-74, Sum P(3) = 1.6e-74
Identities = 67/167 (40%), Positives = 107/167 (64%)
Query: 686 LMGLLKKILKDKERDFECSDEIASILSLLQVQDIFIKPSSGALSLKARVLRRNFEVEQGD 745
L + K+L + +F CS EI +I +++Q+Q+IF+ P + S AR R F V +GD
Sbjct: 478 LSPMFAKMLLESG-NFGCSKEIVTIAAMMQIQNIFVAPHNQRKSA-ARE-HRKFAVAEGD 534
Query: 746 LLTLLNIFKFYEKQENKKQFCHKYFFNYKVLKRAAELKNQMILLLKKSSIPLVTSPRNTN 805
LT+LN+++ + K + Q+C +F NYK L RA ++ Q+ LL K +P +S + +
Sbjct: 535 HLTMLNVYEAFIKHQKSSQWCQDHFLNYKGLLRATAVREQLRHLLNKFKVPRTSSEGDPD 594
Query: 806 AVLKCLTNGFFSNAAYLHYSGVYRTVRGNEDLYIHPSSVLYTLQQPQ 852
+L+C+ +GFF+NAA +H+SG YRT+R + +LYIHP SVLY + P+
Sbjct: 595 VILRCIVSGFFANAARMHHSGSYRTLRDDRELYIHPDSVLYGEKPPK 641
Score = 299 (110.3 bits), Expect = 5.0e-60, Sum P(3) = 5.0e-60
Identities = 61/101 (60%), Positives = 75/101 (74%)
Query: 43 KFSRLYTEASFSQLNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRVAL 102
K RLYTE F +L E T PEMQR+ L+ +LQLKALGI N+LRFSF SPPPAQ++ AL
Sbjct: 391 KCFRLYTEEDFEKLPESTVPEMQRSNLAPVILQLKALGIDNVLRFSFLSPPPAQSMVQAL 450
Query: 103 ELLYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLLSSGS 143
ELL++LG +D G LT P+G MAE PL P+ AK+LL SG+
Sbjct: 451 ELLFALGGLDQYGRLTDPMGVRMAEFPLSPMFAKMLLESGN 491
Score = 108 (43.1 bits), Expect = 1.6e-74, Sum P(3) = 1.6e-74
Identities = 19/43 (44%), Positives = 32/43 (74%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILMECSRK 43
+T+G+L+ DP ++KYSV++LD+ HERT++TDI + +K
Sbjct: 142 LTDGMLVREMMSDPLLKKYSVLILDEAHERTLYTDIAIGLLKK 184
Score = 45 (20.9 bits), Expect = 1.2e-26, Sum P(2) = 1.2e-26
Identities = 8/18 (44%), Positives = 14/18 (77%)
Query: 435 IGILKQYHNQREDLKLLI 452
IG+LK+ +R DL+L++
Sbjct: 179 IGLLKKILKKRRDLRLIV 196
>UNIPROTKB|E1BDN4 [details] [associations]
symbol:DHX35 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 KO:K13117 OMA:NIFVVPP CTD:60625
EMBL:DAAA02036576 EMBL:DAAA02036577 EMBL:DAAA02036578
IPI:IPI00707123 RefSeq:NP_001179272.1 UniGene:Bt.52291
Ensembl:ENSBTAT00000005281 GeneID:513148 KEGG:bta:513148
NextBio:20870723 Uniprot:E1BDN4
Length = 703
Score = 417 (151.9 bits), Expect = 6.1e-74, Sum P(3) = 6.1e-74
Identities = 87/187 (46%), Positives = 129/187 (68%)
Query: 347 KRTQLKLIISSATVDAEEICQFYNISASSNAT-----ILSVKGHLYPVSVYYSNDPVVNY 401
KR L+LI++SAT+DAE+ F+N + +S+ T IL+V+G +PV ++Y PV +Y
Sbjct: 198 KRGDLRLIVASATLDAEKFRDFFNHNDTSDPTRDTCVILTVEGRTFPVDIFYLQSPVPDY 257
Query: 402 VQGVVDTAIKIHESMPVGDILAFVIGLEQIEHIIGILKQYHNQ--REDLK--LLILPMHG 457
++ V+T +KIH++ GDILAF+ G E++E ++ +L + + +K L ILPM+
Sbjct: 258 IKSTVETVMKIHQTEGDGDILAFLTGQEEVETVVSMLIEQARALGQTGMKRHLRILPMYA 317
Query: 458 SLPNNEQIKVFRPTPRAMRKIVIATNIAETSITIPGIVYVIDPGFVKARWFNPNTLTNSL 517
LP+ EQ+KVF R++RK+++ATN+AETSITI GIVYVID GFVK R +NP T L
Sbjct: 318 GLPSFEQMKVFERVSRSVRKVIVATNVAETSITISGIVYVIDCGFVKLRAYNPRTAIECL 377
Query: 518 VVVPISK 524
VVVP+S+
Sbjct: 378 VVVPVSQ 384
Score = 367 (134.2 bits), Expect = 4.0e-61, Sum P(2) = 4.0e-61
Identities = 66/111 (59%), Positives = 87/111 (78%)
Query: 587 QYLLEAGWCYDTKLIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTK 646
QYL EAGW + +++G+T+PRR++ ++A RV+EE LGH VGY IRFDDCT T+
Sbjct: 89 QYLAEAGWTAEGRVVGVTQPRRVAAVTVAGRVAEERGAVLGHEVGYCIRFDDCTNPLATR 148
Query: 647 IKYMTEGILMREMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKILKDK 697
IK++T+G+L+REMM DPLL KYS IMLDE HERT++TDI +GLLKKI K +
Sbjct: 149 IKFLTDGMLVREMMVDPLLTKYSAIMLDEAHERTLYTDIAIGLLKKIQKKR 199
Score = 339 (124.4 bits), Expect = 6.1e-74, Sum P(3) = 6.1e-74
Identities = 65/155 (41%), Positives = 105/155 (67%)
Query: 700 DFECSDEIASILSLLQVQDIFIKPSSGALSLKARVLR--RNFEVEQGDLLTLLNIFKFYE 757
+F CS EI SI +++Q+Q++F+ PS+ K++ +R R F VE+GD LT+LN+++ +
Sbjct: 501 NFGCSQEILSIAAMMQIQNVFVVPSNQ----KSQAIRAHRKFAVEEGDHLTMLNVYEAFI 556
Query: 758 KQENKKQFCHKYFFNYKVLKRAAELKNQMILLLKKSSIPLVTSPRNTNAVLKCLTNGFFS 817
K Q+C ++F NYK L RAA ++ Q+ LL K +P +S + + VL+C+ +GFF+
Sbjct: 557 KHNKNSQWCQEHFLNYKGLVRAATVREQLKKLLVKFQVPKKSSEGDPDPVLRCIVSGFFA 616
Query: 818 NAAYLHYSGVYRTVRGNEDLYIHPSSVLYTLQQPQ 852
NAA H +G YRT+R + +L+IHP+SVLY + P+
Sbjct: 617 NAARFHSTGAYRTIRDDHELHIHPASVLYAEKPPR 651
Score = 298 (110.0 bits), Expect = 2.6e-60, Sum P(3) = 2.6e-60
Identities = 63/112 (56%), Positives = 82/112 (73%)
Query: 41 SRKFSRLYTEASFSQLNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRV 100
S K RLYTE +F QL + T PEMQR+ L+ +LQLKALGI N+LRF F SPPPAQ++
Sbjct: 399 SGKCYRLYTEEAFDQLPQSTVPEMQRSNLAPVILQLKALGIDNVLRFHFMSPPPAQSMVQ 458
Query: 101 ALELLYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLLSSGSVLDSAVEIL 152
ALELLY+LG +D + LT+P+G +AE PL+P+ AK+LL SG+ + EIL
Sbjct: 459 ALELLYALGGLDKDCRLTEPLGMRIAEFPLNPMFAKMLLESGN-FGCSQEIL 509
Score = 108 (43.1 bits), Expect = 6.1e-74, Sum P(3) = 6.1e-74
Identities = 20/46 (43%), Positives = 31/46 (67%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILMECSRKFSR 46
+T+G+L+ DP + KYS IMLD+ HERT++TDI + +K +
Sbjct: 152 LTDGMLVREMMVDPLLTKYSAIMLDEAHERTLYTDIAIGLLKKIQK 197
Score = 46 (21.3 bits), Expect = 3.6e-27, Sum P(2) = 3.6e-27
Identities = 8/18 (44%), Positives = 14/18 (77%)
Query: 435 IGILKQYHNQREDLKLLI 452
IG+LK+ +R DL+L++
Sbjct: 189 IGLLKKIQKKRGDLRLIV 206
Score = 40 (19.1 bits), Expect = 1.0e-28, Sum P(3) = 1.0e-28
Identities = 6/13 (46%), Positives = 9/13 (69%)
Query: 385 HLYPVSVYYSNDP 397
H++P SV Y+ P
Sbjct: 637 HIHPASVLYAEKP 649
>UNIPROTKB|F5GXM6 [details] [associations]
symbol:DHX35 "Probable ATP-dependent RNA helicase DHX35"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K13117 EMBL:AL023803
UniGene:Hs.444520 DNASU:60625 GeneID:60625 KEGG:hsa:60625 CTD:60625
HGNC:HGNC:15861 GenomeRNAi:60625 NextBio:65461 IPI:IPI00513682
RefSeq:NP_001177738.1 ProteinModelPortal:F5GXM6 SMR:F5GXM6
Ensembl:ENST00000373323 UCSC:uc010zwc.2 ArrayExpress:F5GXM6
Bgee:F5GXM6 Uniprot:F5GXM6
Length = 672
Score = 415 (151.1 bits), Expect = 1.1e-73, Sum P(3) = 1.1e-73
Identities = 84/187 (44%), Positives = 128/187 (68%)
Query: 347 KRTQLKLIISSATVDAEEICQFYNISASSN-----ATILSVKGHLYPVSVYYSNDPVVNY 401
KR L+LI++SAT+DA++ F+N + +S+ IL+V+G +PV ++Y PV +Y
Sbjct: 167 KRGDLRLIVASATLDADKFRDFFNQNETSDPARDTCVILTVEGRTFPVDIFYLQSPVPDY 226
Query: 402 VQGVVDTAIKIHESMPVGDILAFVIGLEQIEHIIGILKQYHNQ--REDLK--LLILPMHG 457
++ V+T +KIH++ GD+LAF+ G E++E ++ +L + R +K L +LPM+
Sbjct: 227 IKSTVETVVKIHQTEGDGDVLAFLTGQEEVETVVSMLIEQARALARTGMKRHLRVLPMYA 286
Query: 458 SLPNNEQIKVFRPTPRAMRKIVIATNIAETSITIPGIVYVIDPGFVKARWFNPNTLTNSL 517
LP+ EQ+KVF R++RK+++ATN+AETSITI GIVYVID GFVK R +NP T L
Sbjct: 287 GLPSFEQMKVFERVSRSVRKVIVATNVAETSITISGIVYVIDCGFVKLRAYNPRTAIECL 346
Query: 518 VVVPISK 524
VVVP+S+
Sbjct: 347 VVVPVSQ 353
Score = 375 (137.1 bits), Expect = 1.9e-61, Sum P(2) = 1.9e-61
Identities = 67/112 (59%), Positives = 90/112 (80%)
Query: 586 FQYLLEAGWCYDTKLIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVT 645
F+YL EAGW + +++G+T+PRR++ ++A RV+EE LGH VGY IRFDDCT + T
Sbjct: 57 FKYLAEAGWTAEGRVVGVTQPRRVAAVTVAGRVAEERGAVLGHEVGYCIRFDDCTDQLAT 116
Query: 646 KIKYMTEGILMREMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKILKDK 697
+IK++T+G+L+REMM DPLL KYSVIMLDE HERT++TDI +GLLKKI K +
Sbjct: 117 RIKFLTDGMLVREMMVDPLLTKYSVIMLDEAHERTLYTDIAIGLLKKIQKKR 168
Score = 332 (121.9 bits), Expect = 1.1e-73, Sum P(3) = 1.1e-73
Identities = 66/153 (43%), Positives = 102/153 (66%)
Query: 700 DFECSDEIASILSLLQVQDIFIKPSSGALSLKARVLRRNFEVEQGDLLTLLNIFKFYEKQ 759
+F CS EI SI +++Q+Q+IF+ P + S RV R F VE+GD LT+LNI++ + K
Sbjct: 470 NFGCSQEILSIAAMMQIQNIFVVPPNQK-SHAIRV-HRKFAVEEGDHLTMLNIYEAFIKH 527
Query: 760 ENKKQFCHKYFFNYKVLKRAAELKNQMILLLKKSSIPLVTSPRNTNAVLKCLTNGFFSNA 819
++C ++F NYK L RAA ++ Q+ LL K +P +S + + VL+C+ +GFF+NA
Sbjct: 528 NKDSKWCQEHFLNYKGLVRAATVREQLKKLLVKFQVPRKSSEGDPDLVLRCIVSGFFANA 587
Query: 820 AYLHYSGVYRTVRGNEDLYIHPSSVLYTLQQPQ 852
A H +G YRT+R + +L+IHP+SVLY + P+
Sbjct: 588 ARFHSTGAYRTIRDDHELHIHPASVLYAEKPPR 620
Score = 294 (108.6 bits), Expect = 1.1e-59, Sum P(3) = 1.1e-59
Identities = 62/112 (55%), Positives = 82/112 (73%)
Query: 41 SRKFSRLYTEASFSQLNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRV 100
S K RLYTE +F +L + T PEMQR+ L+ +LQLKALGI N+LRF F SPPPAQ++
Sbjct: 368 SGKCYRLYTEEAFDKLPQSTVPEMQRSNLAPVILQLKALGIDNVLRFHFMSPPPAQSMVQ 427
Query: 101 ALELLYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLLSSGSVLDSAVEIL 152
ALELLY+LG +D + LT+P+G +AE PL+P+ AK+LL SG+ + EIL
Sbjct: 428 ALELLYALGGLDKDCRLTEPLGMRIAEFPLNPMFAKMLLESGN-FGCSQEIL 478
Score = 112 (44.5 bits), Expect = 1.1e-73, Sum P(3) = 1.1e-73
Identities = 21/46 (45%), Positives = 32/46 (69%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILMECSRKFSR 46
+T+G+L+ DP + KYSVIMLD+ HERT++TDI + +K +
Sbjct: 121 LTDGMLVREMMVDPLLTKYSVIMLDEAHERTLYTDIAIGLLKKIQK 166
Score = 46 (21.3 bits), Expect = 1.7e-26, Sum P(2) = 1.7e-26
Identities = 8/18 (44%), Positives = 14/18 (77%)
Query: 435 IGILKQYHNQREDLKLLI 452
IG+LK+ +R DL+L++
Sbjct: 158 IGLLKKIQKKRGDLRLIV 175
Score = 40 (19.1 bits), Expect = 7.9e-29, Sum P(3) = 7.9e-29
Identities = 6/13 (46%), Positives = 9/13 (69%)
Query: 385 HLYPVSVYYSNDP 397
H++P SV Y+ P
Sbjct: 606 HIHPASVLYAEKP 618
>UNIPROTKB|Q9H5Z1 [details] [associations]
symbol:DHX35 "Probable ATP-dependent RNA helicase DHX35"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000398
"mRNA splicing, via spliceosome" evidence=IC] [GO:0071013
"catalytic step 2 spliceosome" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:CH471077 GO:GO:0003676 GO:GO:0000398
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 HOVERGEN:HBG039428 KO:K13117 OMA:NIFVVPP
EMBL:AK026412 EMBL:AK025541 EMBL:AL023803 EMBL:BC132669
IPI:IPI00030288 RefSeq:NP_068750.2 UniGene:Hs.444520
ProteinModelPortal:Q9H5Z1 SMR:Q9H5Z1 IntAct:Q9H5Z1
PhosphoSite:Q9H5Z1 DMDM:20137971 PRIDE:Q9H5Z1 DNASU:60625
Ensembl:ENST00000252011 GeneID:60625 KEGG:hsa:60625 UCSC:uc002xjh.3
CTD:60625 GeneCards:GC20P037590 HGNC:HGNC:15861 neXtProt:NX_Q9H5Z1
PharmGKB:PA27222 InParanoid:Q9H5Z1 PhylomeDB:Q9H5Z1
GenomeRNAi:60625 NextBio:65461 ArrayExpress:Q9H5Z1 Bgee:Q9H5Z1
CleanEx:HS_DHX35 Genevestigator:Q9H5Z1 GermOnline:ENSG00000101452
Uniprot:Q9H5Z1
Length = 703
Score = 415 (151.1 bits), Expect = 2.2e-73, Sum P(3) = 2.2e-73
Identities = 84/187 (44%), Positives = 128/187 (68%)
Query: 347 KRTQLKLIISSATVDAEEICQFYNISASSN-----ATILSVKGHLYPVSVYYSNDPVVNY 401
KR L+LI++SAT+DA++ F+N + +S+ IL+V+G +PV ++Y PV +Y
Sbjct: 198 KRGDLRLIVASATLDADKFRDFFNQNETSDPARDTCVILTVEGRTFPVDIFYLQSPVPDY 257
Query: 402 VQGVVDTAIKIHESMPVGDILAFVIGLEQIEHIIGILKQYHNQ--REDLK--LLILPMHG 457
++ V+T +KIH++ GD+LAF+ G E++E ++ +L + R +K L +LPM+
Sbjct: 258 IKSTVETVVKIHQTEGDGDVLAFLTGQEEVETVVSMLIEQARALARTGMKRHLRVLPMYA 317
Query: 458 SLPNNEQIKVFRPTPRAMRKIVIATNIAETSITIPGIVYVIDPGFVKARWFNPNTLTNSL 517
LP+ EQ+KVF R++RK+++ATN+AETSITI GIVYVID GFVK R +NP T L
Sbjct: 318 GLPSFEQMKVFERVSRSVRKVIVATNVAETSITISGIVYVIDCGFVKLRAYNPRTAIECL 377
Query: 518 VVVPISK 524
VVVP+S+
Sbjct: 378 VVVPVSQ 384
Score = 373 (136.4 bits), Expect = 4.5e-61, Sum P(2) = 4.5e-61
Identities = 67/111 (60%), Positives = 89/111 (80%)
Query: 587 QYLLEAGWCYDTKLIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTK 646
QYL EAGW + +++G+T+PRR++ ++A RV+EE LGH VGY IRFDDCT + T+
Sbjct: 89 QYLAEAGWTAEGRVVGVTQPRRVAAVTVAGRVAEERGAVLGHEVGYCIRFDDCTDQLATR 148
Query: 647 IKYMTEGILMREMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKILKDK 697
IK++T+G+L+REMM DPLL KYSVIMLDE HERT++TDI +GLLKKI K +
Sbjct: 149 IKFLTDGMLVREMMVDPLLTKYSVIMLDEAHERTLYTDIAIGLLKKIQKKR 199
Score = 332 (121.9 bits), Expect = 2.2e-73, Sum P(3) = 2.2e-73
Identities = 66/153 (43%), Positives = 102/153 (66%)
Query: 700 DFECSDEIASILSLLQVQDIFIKPSSGALSLKARVLRRNFEVEQGDLLTLLNIFKFYEKQ 759
+F CS EI SI +++Q+Q+IF+ P + S RV R F VE+GD LT+LNI++ + K
Sbjct: 501 NFGCSQEILSIAAMMQIQNIFVVPPNQK-SHAIRV-HRKFAVEEGDHLTMLNIYEAFIKH 558
Query: 760 ENKKQFCHKYFFNYKVLKRAAELKNQMILLLKKSSIPLVTSPRNTNAVLKCLTNGFFSNA 819
++C ++F NYK L RAA ++ Q+ LL K +P +S + + VL+C+ +GFF+NA
Sbjct: 559 NKDSKWCQEHFLNYKGLVRAATVREQLKKLLVKFQVPRKSSEGDPDLVLRCIVSGFFANA 618
Query: 820 AYLHYSGVYRTVRGNEDLYIHPSSVLYTLQQPQ 852
A H +G YRT+R + +L+IHP+SVLY + P+
Sbjct: 619 ARFHSTGAYRTIRDDHELHIHPASVLYAEKPPR 651
Score = 294 (108.6 bits), Expect = 1.6e-59, Sum P(3) = 1.6e-59
Identities = 62/112 (55%), Positives = 82/112 (73%)
Query: 41 SRKFSRLYTEASFSQLNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRV 100
S K RLYTE +F +L + T PEMQR+ L+ +LQLKALGI N+LRF F SPPPAQ++
Sbjct: 399 SGKCYRLYTEEAFDKLPQSTVPEMQRSNLAPVILQLKALGIDNVLRFHFMSPPPAQSMVQ 458
Query: 101 ALELLYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLLSSGSVLDSAVEIL 152
ALELLY+LG +D + LT+P+G +AE PL+P+ AK+LL SG+ + EIL
Sbjct: 459 ALELLYALGGLDKDCRLTEPLGMRIAEFPLNPMFAKMLLESGN-FGCSQEIL 509
Score = 112 (44.5 bits), Expect = 2.2e-73, Sum P(3) = 2.2e-73
Identities = 21/46 (45%), Positives = 32/46 (69%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILMECSRKFSR 46
+T+G+L+ DP + KYSVIMLD+ HERT++TDI + +K +
Sbjct: 152 LTDGMLVREMMVDPLLTKYSVIMLDEAHERTLYTDIAIGLLKKIQK 197
Score = 46 (21.3 bits), Expect = 2.2e-26, Sum P(2) = 2.2e-26
Identities = 8/18 (44%), Positives = 14/18 (77%)
Query: 435 IGILKQYHNQREDLKLLI 452
IG+LK+ +R DL+L++
Sbjct: 189 IGLLKKIQKKRGDLRLIV 206
Score = 40 (19.1 bits), Expect = 1.1e-28, Sum P(3) = 1.1e-28
Identities = 6/13 (46%), Positives = 9/13 (69%)
Query: 385 HLYPVSVYYSNDP 397
H++P SV Y+ P
Sbjct: 637 HIHPASVLYAEKP 649
>UNIPROTKB|E1C4U5 [details] [associations]
symbol:DHX35 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0071013 "catalytic step
2 spliceosome" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 OMA:NIFVVPP EMBL:AADN02019394
IPI:IPI00591771 Ensembl:ENSGALT00000005796 Uniprot:E1C4U5
Length = 705
Score = 411 (149.7 bits), Expect = 3.4e-71, Sum P(3) = 3.4e-71
Identities = 84/187 (44%), Positives = 126/187 (67%)
Query: 347 KRTQLKLIISSATVDAEEICQFYNIS-----ASSNATILSVKGHLYPVSVYYSNDPVVNY 401
KR L+LI++SAT+DAE+ F+N + + + IL+V+G +PV ++Y PV +Y
Sbjct: 198 KRGDLRLIVASATLDAEKFRDFFNQNDTGDPSKDTSVILTVEGRTFPVDIFYIQSPVPDY 257
Query: 402 VQGVVDTAIKIHESMPVGDILAFVIGLEQIEHIIGILKQYHN--QREDLK--LLILPMHG 457
++ V+TA+KIH+ GDILAF+ G E++E ++ +L + R ++ L +LPM+
Sbjct: 258 IKSTVETAMKIHQMENDGDILAFLTGQEEVETVVSMLIEQARALSRTGMRKHLRVLPMYA 317
Query: 458 SLPNNEQIKVFRPTPRAMRKIVIATNIAETSITIPGIVYVIDPGFVKARWFNPNTLTNSL 517
LP+ +Q+KVF R++RK+++ATN+AETSITI GI YVID GFVK R +NP T L
Sbjct: 318 GLPSPDQMKVFERVSRSVRKVIVATNVAETSITIHGIAYVIDCGFVKLRAYNPKTAIECL 377
Query: 518 VVVPISK 524
VVVP+SK
Sbjct: 378 VVVPVSK 384
Score = 372 (136.0 bits), Expect = 5.7e-31, P = 5.7e-31
Identities = 74/149 (49%), Positives = 102/149 (68%)
Query: 587 QYLLEAGWCYDTKLIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTK 646
QYL EAGW + +++G+T+PRR++ S+A RV++E LGH VGY IRFDDCT T+
Sbjct: 89 QYLAEAGWTAEGRVVGVTQPRRVAAVSVAGRVADERGAVLGHEVGYCIRFDDCTDPQATR 148
Query: 647 IKYMTEGILMREMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKILKDKERDFECSDE 706
IK++T+G+L+REMM DPLL +YSV+MLDE HERT++TDI +GLLKKI K K D
Sbjct: 149 IKFLTDGMLVREMMADPLLTRYSVLMLDEAHERTLYTDIAIGLLKKIQK-KRGDLRLIVA 207
Query: 707 IASILSLLQVQDIFIKPSSGALSLKARVL 735
A+ L + +D F + +G S V+
Sbjct: 208 SAT-LDAEKFRDFFNQNDTGDPSKDTSVI 235
Score = 320 (117.7 bits), Expect = 3.4e-71, Sum P(3) = 3.4e-71
Identities = 63/153 (41%), Positives = 101/153 (66%)
Query: 700 DFECSDEIASILSLLQVQDIFIKPSSGALSLKARVLRRNFEVEQGDLLTLLNIFKFYEKQ 759
+F CS EI +I +++Q+Q+IF+ P + S AR R F VE+GD LT+LN+++ + K
Sbjct: 503 NFGCSQEILTIAAMMQIQNIFLIPPNQK-SQAARQ-HRKFAVEEGDHLTMLNVYEAFVKH 560
Query: 760 ENKKQFCHKYFFNYKVLKRAAELKNQMILLLKKSSIPLVTSPRNTNAVLKCLTNGFFSNA 819
Q+C ++F NYK L RA+ ++ Q+ LL +P +S + + VL+C+ +GFF+NA
Sbjct: 561 SKSSQWCQEHFLNYKGLVRASVVREQLKKLLVCFKVPKKSSEGDPDPVLRCIVSGFFANA 620
Query: 820 AYLHYSGVYRTVRGNEDLYIHPSSVLYTLQQPQ 852
A H +G YRT+R + +L+IHP+SVLY + P+
Sbjct: 621 AKFHSTGAYRTIRDDHELHIHPTSVLYAEKPPR 653
Score = 284 (105.0 bits), Expect = 1.2e-56, Sum P(3) = 1.2e-56
Identities = 62/114 (54%), Positives = 82/114 (71%)
Query: 41 SRKFSRLYT--EASFSQLNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNL 98
S K RLYT E F +L + T PEMQR+ L+ +LQLKALGI N+LRF F SPPPAQ++
Sbjct: 399 SGKCYRLYTATEEDFEKLPQSTVPEMQRSNLAPVILQLKALGIDNVLRFPFLSPPPAQSM 458
Query: 99 RVALELLYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLLSSGSVLDSAVEIL 152
ALELLY+LG +D++ LT+P+G +AE PL+P+ AK+LL SG+ + EIL
Sbjct: 459 VQALELLYALGGLDMHCRLTEPLGMRIAEFPLNPMFAKMLLESGN-FGCSQEIL 511
Score = 108 (43.1 bits), Expect = 3.4e-71, Sum P(3) = 3.4e-71
Identities = 19/46 (41%), Positives = 32/46 (69%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILMECSRKFSR 46
+T+G+L+ DP + +YSV+MLD+ HERT++TDI + +K +
Sbjct: 152 LTDGMLVREMMADPLLTRYSVLMLDEAHERTLYTDIAIGLLKKIQK 197
Score = 46 (21.3 bits), Expect = 4.9e-25, Sum P(2) = 4.9e-25
Identities = 8/18 (44%), Positives = 14/18 (77%)
Query: 435 IGILKQYHNQREDLKLLI 452
IG+LK+ +R DL+L++
Sbjct: 189 IGLLKKIQKKRGDLRLIV 206
Score = 41 (19.5 bits), Expect = 3.1e-27, Sum P(3) = 3.1e-27
Identities = 11/27 (40%), Positives = 16/27 (59%)
Query: 385 HLYPVSVYYSNDPV--VNYVQGVVDTA 409
H++P SV Y+ P V Y + V+ TA
Sbjct: 639 HIHPTSVLYAEKPPRWVVYNE-VIQTA 664
>RGD|1311165 [details] [associations]
symbol:Dhx35 "DEAH (Asp-Glu-Ala-His) box polypeptide 35"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IEA;ISO]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 RGD:1311165 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GeneTree:ENSGT00700000104241 KO:K13117
OMA:NIFVVPP CTD:60625 EMBL:CH474005 IPI:IPI00764730
RefSeq:NP_001102071.1 UniGene:Rn.118078 Ensembl:ENSRNOT00000021435
GeneID:362260 KEGG:rno:362260 UCSC:RGD:1311165 NextBio:679233
Uniprot:D4AEG5
Length = 679
Score = 415 (151.1 bits), Expect = 2.2e-68, Sum P(3) = 2.2e-68
Identities = 85/187 (45%), Positives = 127/187 (67%)
Query: 347 KRTQLKLIISSATVDAEEICQFYNISASSN-----ATILSVKGHLYPVSVYYSNDPVVNY 401
KR L+LI++SAT+DAE+ F+N + +S+ IL+V+G +PV ++Y PV +Y
Sbjct: 198 KRGDLRLIVASATLDAEKFRDFFNQNETSDPARDTCVILTVEGRTFPVDIFYLQSPVPDY 257
Query: 402 VQGVVDTAIKIHESMPVGDILAFVIGLEQIEHIIGILKQYHNQ--REDLK--LLILPMHG 457
++ VDT +KIH++ GDILAF+ G E++E ++ +L + R +K L +LPM+
Sbjct: 258 IKATVDTVVKIHQTEGDGDILAFLTGQEEVETVVSMLIEQARALARTGMKKHLRVLPMYA 317
Query: 458 SLPNNEQIKVFRPTPRAMRKIVIATNIAETSITIPGIVYVIDPGFVKARWFNPNTLTNSL 517
LP+ EQ+KVF ++RK+++ATN+AETSITI GIVYVID GF+K R +NP T L
Sbjct: 318 GLPSFEQMKVFERVSHSVRKVIVATNVAETSITISGIVYVIDCGFMKLRAYNPRTAIECL 377
Query: 518 VVVPISK 524
VVVP+S+
Sbjct: 378 VVVPVSQ 384
Score = 366 (133.9 bits), Expect = 3.2e-55, Sum P(2) = 3.2e-55
Identities = 65/111 (58%), Positives = 88/111 (79%)
Query: 587 QYLLEAGWCYDTKLIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTK 646
QYL EAGW + +++G+T+PRR++ ++A RV++E LGH VGY IRFDDCT T+
Sbjct: 89 QYLAEAGWTAEGRVVGVTQPRRVAAVTVAGRVADERGAVLGHEVGYCIRFDDCTDPLATR 148
Query: 647 IKYMTEGILMREMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKILKDK 697
IK++T+G+L+REMM DPLL KYSV+MLDE HERT++TDI +GLLKKI K +
Sbjct: 149 IKFLTDGMLVREMMVDPLLTKYSVVMLDEAHERTLYTDIAIGLLKKIQKKR 199
Score = 294 (108.6 bits), Expect = 5.5e-54, Sum P(3) = 5.5e-54
Identities = 63/112 (56%), Positives = 82/112 (73%)
Query: 41 SRKFSRLYTEASFSQLNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRV 100
S K RLYTE +F QL + T PEMQR+ L+ VLQLKALGI ++LRF F SPPPAQ++
Sbjct: 399 SGKCYRLYTEEAFEQLPQSTVPEMQRSNLAPVVLQLKALGIDSVLRFHFMSPPPAQSMVQ 458
Query: 101 ALELLYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLLSSGSVLDSAVEIL 152
ALELLY+LG +D + LT+P+G +AE PL+P+ AK+LL SG+ + EIL
Sbjct: 459 ALELLYALGGLDKDCRLTEPLGMRIAEFPLNPMFAKMLLESGN-FGCSQEIL 509
Score = 283 (104.7 bits), Expect = 2.2e-68, Sum P(3) = 2.2e-68
Identities = 55/132 (41%), Positives = 88/132 (66%)
Query: 700 DFECSDEIASILSLLQVQDIFIKPSSGALSLKARVLRRNFEVEQGDLLTLLNIFKFYEKQ 759
+F CS EI SI +++Q+Q++F+ PS+ S RV R F VE+GD LT+LN+++ + K
Sbjct: 501 NFGCSQEILSIAAMMQIQNVFVFPSNQK-SQATRV-HRKFAVEEGDHLTMLNVYEAFIKH 558
Query: 760 ENKKQFCHKYFFNYKVLKRAAELKNQMILLLKKSSIPLVTSPRNTNAVLKCLTNGFFSNA 819
Q+C ++F NYK L RAA +++Q+ LL K +P ++S + + VL+C+ +GFF+NA
Sbjct: 559 NKSSQWCQEHFLNYKGLVRAATVRDQLKKLLVKFQVPKMSSEGDPDPVLRCIVSGFFANA 618
Query: 820 AYLHYSGVYRTV 831
A H +G YR +
Sbjct: 619 ARFHSTGAYRVI 630
Score = 111 (44.1 bits), Expect = 2.2e-68, Sum P(3) = 2.2e-68
Identities = 20/46 (43%), Positives = 32/46 (69%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILMECSRKFSR 46
+T+G+L+ DP + KYSV+MLD+ HERT++TDI + +K +
Sbjct: 152 LTDGMLVREMMVDPLLTKYSVVMLDEAHERTLYTDIAIGLLKKIQK 197
Score = 46 (21.3 bits), Expect = 5.3e-21, Sum P(2) = 5.3e-21
Identities = 8/18 (44%), Positives = 14/18 (77%)
Query: 435 IGILKQYHNQREDLKLLI 452
IG+LK+ +R DL+L++
Sbjct: 189 IGLLKKIQKKRGDLRLIV 206
>UNIPROTKB|E2RQN7 [details] [associations]
symbol:DHX35 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 OMA:NIFVVPP EMBL:AAEX03013926
Ensembl:ENSCAFT00000014371 Uniprot:E2RQN7
Length = 702
Score = 416 (151.5 bits), Expect = 6.0e-68, Sum P(3) = 6.0e-68
Identities = 87/207 (42%), Positives = 130/207 (62%)
Query: 347 KRTQLKLIISSATVDAEEICQFYNISASSNAT-----ILSVKGHLYPVSVYYSNDPVVNY 401
KR L+L+++SAT+DAE+ F+N + +S+ T IL+V+G +PV ++Y PV +Y
Sbjct: 198 KRGDLRLLVASATLDAEKFRDFFNQNETSDPTRDTCVILTVEGRTFPVDIFYLQSPVPDY 257
Query: 402 VQGVVDTAIKIHESMPVGDILAFVIGLEQIEHIIGILKQYHNQ--REDLK--LLILPMHG 457
++ V+T +KIH++ GDILAF+ G E++E ++ +L + R +K L +LPM+
Sbjct: 258 IKSTVETVMKIHQTEGDGDILAFLTGQEEVETVVSMLIEQARALGRTGMKRHLRVLPMYA 317
Query: 458 SLPNNEQIKVFRPTPRAMRKIVIATNIAETSITIPGIVYVIDPGFVKARWFNPNTLTNSL 517
LP+ EQ+KVF R++RK+++ATN+AETSITI GIVYVID GFVK R +NP T L
Sbjct: 318 GLPSFEQMKVFERVSRSVRKVIVATNVAETSITISGIVYVIDCGFVKLRAYNPRTTIECL 377
Query: 518 VVVPISKXXXXXXXXXXXXXXXXHVYR 544
VV P+S+ YR
Sbjct: 378 VVAPVSQASANQRAGRAGRSRSGKCYR 404
Score = 363 (132.8 bits), Expect = 1.8e-54, Sum P(2) = 1.8e-54
Identities = 65/111 (58%), Positives = 87/111 (78%)
Query: 587 QYLLEAGWCYDTKLIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTK 646
QYL EAGW + +++G+T+PRR++ ++A RV+EE LGH VGY IRFDDCT T+
Sbjct: 89 QYLAEAGWTAEGRVVGVTQPRRVAAVTVAGRVAEERGAVLGHEVGYCIRFDDCTDPLATR 148
Query: 647 IKYMTEGILMREMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKILKDK 697
IK++T+G+L+REMM DPLL KYS IMLDE HERT++TDI +GLLKKI + +
Sbjct: 149 IKFLTDGMLVREMMVDPLLTKYSAIMLDEAHERTLYTDIAIGLLKKIQRKR 199
Score = 304 (112.1 bits), Expect = 1.0e-54, Sum P(3) = 1.0e-54
Identities = 63/112 (56%), Positives = 83/112 (74%)
Query: 41 SRKFSRLYTEASFSQLNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRV 100
S K RLYTE +F +L +CT PEMQR+ L+ +LQLKALGI N+LRF F SPPPAQ++
Sbjct: 399 SGKCYRLYTEEAFDKLPQCTVPEMQRSNLAPVILQLKALGIDNVLRFHFMSPPPAQSMVQ 458
Query: 101 ALELLYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLLSSGSVLDSAVEIL 152
ALELLY+LG +D + LT+P+G +AE PL+P+ AK+LL SG+ + EIL
Sbjct: 459 ALELLYALGGLDKDCRLTEPLGMRVAEFPLNPMFAKMLLESGN-FGCSQEIL 509
Score = 280 (103.6 bits), Expect = 6.0e-68, Sum P(3) = 6.0e-68
Identities = 56/141 (39%), Positives = 88/141 (62%)
Query: 700 DFECSDEIASILSLLQVQDIFIKPSSGALSLKARVLRRNFEVEQGDLLTLLNIFKFYEKQ 759
+F CS EI SI +++Q+Q+IF+ P + S RV R F VE+GD LT+LN+++ + K
Sbjct: 501 NFGCSQEILSIAAMMQIQNIFVVPGNQK-SQAIRV-HRKFAVEEGDHLTMLNVYEAFIKH 558
Query: 760 ENKKQFCHKYFFNYKVLKRAAELKNQMILLLKKSSIPLVTSPRNTNAVLKCLTNGFFSNA 819
Q+C ++F NYK L RAA ++ Q+ LL K +P +S + + VL+C+ +GFF+NA
Sbjct: 559 NKNSQWCQEHFLNYKGLIRAATVREQLKKLLVKFQVPKKSSEGDPDPVLRCIVSGFFANA 618
Query: 820 AYLHYSGVYRTVRGNEDLYIH 840
A H +G Y + LY++
Sbjct: 619 ARFHSTGAYSVILSPHSLYLY 639
Score = 111 (44.1 bits), Expect = 6.0e-68, Sum P(3) = 6.0e-68
Identities = 21/46 (45%), Positives = 31/46 (67%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILMECSRKFSR 46
+T+G+L+ DP + KYS IMLD+ HERT++TDI + +K R
Sbjct: 152 LTDGMLVREMMVDPLLTKYSAIMLDEAHERTLYTDIAIGLLKKIQR 197
Score = 48 (22.0 bits), Expect = 8.2e-21, Sum P(2) = 8.2e-21
Identities = 9/18 (50%), Positives = 14/18 (77%)
Query: 435 IGILKQYHNQREDLKLLI 452
IG+LK+ +R DL+LL+
Sbjct: 189 IGLLKKIQRKRGDLRLLV 206
>UNIPROTKB|E2RQN1 [details] [associations]
symbol:DHX35 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 EMBL:AAEX03013926
Ensembl:ENSCAFT00000014378 NextBio:20859776 Uniprot:E2RQN1
Length = 698
Score = 416 (151.5 bits), Expect = 3.8e-67, Sum P(3) = 3.8e-67
Identities = 87/207 (42%), Positives = 130/207 (62%)
Query: 347 KRTQLKLIISSATVDAEEICQFYNISASSNAT-----ILSVKGHLYPVSVYYSNDPVVNY 401
KR L+L+++SAT+DAE+ F+N + +S+ T IL+V+G +PV ++Y PV +Y
Sbjct: 190 KRGDLRLLVASATLDAEKFRDFFNQNETSDPTRDTCVILTVEGRTFPVDIFYLQSPVPDY 249
Query: 402 VQGVVDTAIKIHESMPVGDILAFVIGLEQIEHIIGILKQYHNQ--REDLK--LLILPMHG 457
++ V+T +KIH++ GDILAF+ G E++E ++ +L + R +K L +LPM+
Sbjct: 250 IKSTVETVMKIHQTEGDGDILAFLTGQEEVETVVSMLIEQARALGRTGMKRHLRVLPMYA 309
Query: 458 SLPNNEQIKVFRPTPRAMRKIVIATNIAETSITIPGIVYVIDPGFVKARWFNPNTLTNSL 517
LP+ EQ+KVF R++RK+++ATN+AETSITI GIVYVID GFVK R +NP T L
Sbjct: 310 GLPSFEQMKVFERVSRSVRKVIVATNVAETSITISGIVYVIDCGFVKLRAYNPRTTIECL 369
Query: 518 VVVPISKXXXXXXXXXXXXXXXXHVYR 544
VV P+S+ YR
Sbjct: 370 VVAPVSQASANQRAGRAGRSRSGKCYR 396
Score = 363 (132.8 bits), Expect = 1.2e-53, Sum P(2) = 1.2e-53
Identities = 65/111 (58%), Positives = 87/111 (78%)
Query: 587 QYLLEAGWCYDTKLIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTK 646
QYL EAGW + +++G+T+PRR++ ++A RV+EE LGH VGY IRFDDCT T+
Sbjct: 81 QYLAEAGWTAEGRVVGVTQPRRVAAVTVAGRVAEERGAVLGHEVGYCIRFDDCTDPLATR 140
Query: 647 IKYMTEGILMREMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKILKDK 697
IK++T+G+L+REMM DPLL KYS IMLDE HERT++TDI +GLLKKI + +
Sbjct: 141 IKFLTDGMLVREMMVDPLLTKYSAIMLDEAHERTLYTDIAIGLLKKIQRKR 191
Score = 304 (112.1 bits), Expect = 6.7e-54, Sum P(3) = 6.7e-54
Identities = 63/112 (56%), Positives = 83/112 (74%)
Query: 41 SRKFSRLYTEASFSQLNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRV 100
S K RLYTE +F +L +CT PEMQR+ L+ +LQLKALGI N+LRF F SPPPAQ++
Sbjct: 391 SGKCYRLYTEEAFDKLPQCTVPEMQRSNLAPVILQLKALGIDNVLRFHFMSPPPAQSMVQ 450
Query: 101 ALELLYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLLSSGSVLDSAVEIL 152
ALELLY+LG +D + LT+P+G +AE PL+P+ AK+LL SG+ + EIL
Sbjct: 451 ALELLYALGGLDKDCRLTEPLGMRVAEFPLNPMFAKMLLESGN-FGCSQEIL 501
Score = 272 (100.8 bits), Expect = 3.8e-67, Sum P(3) = 3.8e-67
Identities = 58/148 (39%), Positives = 92/148 (62%)
Query: 700 DFECSDEIASILSLLQVQDIFIKPSSGALSLKARVLRRNFEVEQGDLLTLLNIFKFYEKQ 759
+F CS EI SI +++Q+Q+IF+ P + S RV R F VE+GD LT+LN+++ + K
Sbjct: 493 NFGCSQEILSIAAMMQIQNIFVVPGNQK-SQAIRV-HRKFAVEEGDHLTMLNVYEAFIKH 550
Query: 760 ENKKQFCHKYFFNYKVLKRAAELKNQMILLLKKSSIPLVTSPRNTNAVLKCLTNGFFSNA 819
Q+C ++F NYK L RAA ++ Q+ LL K +P +S + + VL+C+ +GFF+NA
Sbjct: 551 NKNSQWCQEHFLNYKGLIRAATVREQLKKLLVKFQVPKKSSEGDPDPVLRCIVSGFFANA 610
Query: 820 AYLHYSGVY-RTV-RGNEDLYIHPSSVL 845
A H +G Y RT+ + +H +V+
Sbjct: 611 ARFHSTGAYSRTLAHSGREAQVHLFTVV 638
Score = 111 (44.1 bits), Expect = 3.8e-67, Sum P(3) = 3.8e-67
Identities = 21/46 (45%), Positives = 31/46 (67%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILMECSRKFSR 46
+T+G+L+ DP + KYS IMLD+ HERT++TDI + +K R
Sbjct: 144 LTDGMLVREMMVDPLLTKYSAIMLDEAHERTLYTDIAIGLLKKIQR 189
Score = 48 (22.0 bits), Expect = 6.1e-20, Sum P(2) = 6.1e-20
Identities = 9/18 (50%), Positives = 14/18 (77%)
Query: 435 IGILKQYHNQREDLKLLI 452
IG+LK+ +R DL+LL+
Sbjct: 181 IGLLKKIQRKRGDLRLLV 198
>UNIPROTKB|Q5THR1 [details] [associations]
symbol:DHX35 "Probable ATP-dependent RNA helicase DHX35"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 HOVERGEN:HBG039428
EMBL:AL023803 UniGene:Hs.444520 HGNC:HGNC:15861 IPI:IPI00642913
SMR:Q5THR1 Ensembl:ENST00000373325 Uniprot:Q5THR1
Length = 679
Score = 415 (151.1 bits), Expect = 4.0e-67, Sum P(3) = 4.0e-67
Identities = 84/187 (44%), Positives = 128/187 (68%)
Query: 347 KRTQLKLIISSATVDAEEICQFYNISASSN-----ATILSVKGHLYPVSVYYSNDPVVNY 401
KR L+LI++SAT+DA++ F+N + +S+ IL+V+G +PV ++Y PV +Y
Sbjct: 198 KRGDLRLIVASATLDADKFRDFFNQNETSDPARDTCVILTVEGRTFPVDIFYLQSPVPDY 257
Query: 402 VQGVVDTAIKIHESMPVGDILAFVIGLEQIEHIIGILKQYHNQ--REDLK--LLILPMHG 457
++ V+T +KIH++ GD+LAF+ G E++E ++ +L + R +K L +LPM+
Sbjct: 258 IKSTVETVVKIHQTEGDGDVLAFLTGQEEVETVVSMLIEQARALARTGMKRHLRVLPMYA 317
Query: 458 SLPNNEQIKVFRPTPRAMRKIVIATNIAETSITIPGIVYVIDPGFVKARWFNPNTLTNSL 517
LP+ EQ+KVF R++RK+++ATN+AETSITI GIVYVID GFVK R +NP T L
Sbjct: 318 GLPSFEQMKVFERVSRSVRKVIVATNVAETSITISGIVYVIDCGFVKLRAYNPRTAIECL 377
Query: 518 VVVPISK 524
VVVP+S+
Sbjct: 378 VVVPVSQ 384
Score = 373 (136.4 bits), Expect = 1.2e-54, Sum P(2) = 1.2e-54
Identities = 67/111 (60%), Positives = 89/111 (80%)
Query: 587 QYLLEAGWCYDTKLIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTK 646
QYL EAGW + +++G+T+PRR++ ++A RV+EE LGH VGY IRFDDCT + T+
Sbjct: 89 QYLAEAGWTAEGRVVGVTQPRRVAAVTVAGRVAEERGAVLGHEVGYCIRFDDCTDQLATR 148
Query: 647 IKYMTEGILMREMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKILKDK 697
IK++T+G+L+REMM DPLL KYSVIMLDE HERT++TDI +GLLKKI K +
Sbjct: 149 IKFLTDGMLVREMMVDPLLTKYSVIMLDEAHERTLYTDIAIGLLKKIQKKR 199
Score = 294 (108.6 bits), Expect = 9.9e-53, Sum P(3) = 9.9e-53
Identities = 62/112 (55%), Positives = 82/112 (73%)
Query: 41 SRKFSRLYTEASFSQLNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRV 100
S K RLYTE +F +L + T PEMQR+ L+ +LQLKALGI N+LRF F SPPPAQ++
Sbjct: 399 SGKCYRLYTEEAFDKLPQSTVPEMQRSNLAPVILQLKALGIDNVLRFHFMSPPPAQSMVQ 458
Query: 101 ALELLYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLLSSGSVLDSAVEIL 152
ALELLY+LG +D + LT+P+G +AE PL+P+ AK+LL SG+ + EIL
Sbjct: 459 ALELLYALGGLDKDCRLTEPLGMRIAEFPLNPMFAKMLLESGN-FGCSQEIL 509
Score = 270 (100.1 bits), Expect = 4.0e-67, Sum P(3) = 4.0e-67
Identities = 55/132 (41%), Positives = 85/132 (64%)
Query: 700 DFECSDEIASILSLLQVQDIFIKPSSGALSLKARVLRRNFEVEQGDLLTLLNIFKFYEKQ 759
+F CS EI SI +++Q+Q+IF+ P + S RV R F VE+GD LT+LNI++ + K
Sbjct: 501 NFGCSQEILSIAAMMQIQNIFVVPPNQK-SHAIRV-HRKFAVEEGDHLTMLNIYEAFIKH 558
Query: 760 ENKKQFCHKYFFNYKVLKRAAELKNQMILLLKKSSIPLVTSPRNTNAVLKCLTNGFFSNA 819
++C ++F NYK L RAA ++ Q+ LL K +P +S + + VL+C+ +GFF+NA
Sbjct: 559 NKDSKWCQEHFLNYKGLVRAATVREQLKKLLVKFQVPRKSSEGDPDLVLRCIVSGFFANA 618
Query: 820 AYLHYSGVYRTV 831
A H +G YR +
Sbjct: 619 ARFHSTGAYRVI 630
Score = 112 (44.5 bits), Expect = 4.0e-67, Sum P(3) = 4.0e-67
Identities = 21/46 (45%), Positives = 32/46 (69%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILMECSRKFSR 46
+T+G+L+ DP + KYSVIMLD+ HERT++TDI + +K +
Sbjct: 152 LTDGMLVREMMVDPLLTKYSVIMLDEAHERTLYTDIAIGLLKKIQK 197
Score = 46 (21.3 bits), Expect = 1.5e-19, Sum P(2) = 1.5e-19
Identities = 8/18 (44%), Positives = 14/18 (77%)
Query: 435 IGILKQYHNQREDLKLLI 452
IG+LK+ +R DL+L++
Sbjct: 189 IGLLKKIQKKRGDLRLIV 206
>DICTYBASE|DDB_G0269306 [details] [associations]
symbol:dhx35 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 dictyBase:DDB_G0269306 GO:GO:0005524
EMBL:AAFI02000005 GenomeReviews:CM000150_GR GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K13117 OMA:NIFVVPP
RefSeq:XP_645858.1 ProteinModelPortal:Q55EC3
EnsemblProtists:DDB0233419 GeneID:8616802 KEGG:ddi:DDB_G0269306
InParanoid:Q55EC3 Uniprot:Q55EC3
Length = 716
Score = 383 (139.9 bits), Expect = 1.7e-60, Sum P(4) = 1.7e-60
Identities = 93/236 (39%), Positives = 132/236 (55%)
Query: 351 LKLIISSATVDAEEICQFYNISASSN-----ATILSVKGHLYPVSVYYSNDPVVNYVQGV 405
LKLIISSAT++A + F+N + +++ +TILS++G YPV ++Y + NY+Q
Sbjct: 214 LKLIISSATLNANDFFNFFNYNQTNDKSKDTSTILSIEGRTYPVDIHYLEESTSNYIQTT 273
Query: 406 VDTAIKIHESMPVGDILAFVIGLEQIEHIIG-------ILKQYHNQRED------LKLLI 452
+ T I IH + P GDIL F+ G E+IE +I IL+QYH Q +K +
Sbjct: 274 IQTIIDIHTTQPPGDILVFLTGQEEIEKLIQTLDDKFEILRQYHQQHHHQQQQPFMKYSL 333
Query: 453 LPMHGSLPNNEQIKVFRPT--PRAMRKIVIATNIAETSITIPGIVYVIDPGFVKARWFNP 510
LPM+ L N+QIKVF + +RKI+I+TNIAETSITI G+VYV+D GFVK + ++
Sbjct: 334 LPMYSGLSINKQIKVFESVGDSKKIRKIIISTNIAETSITIDGVVYVVDCGFVKIKSYDS 393
Query: 511 NTLTNSLVVVPISKXXXXXXXXXXXXXXXXHVYRKNFMYNRL-FIHFCVSRNIPTI 565
+ SLV+VP SK YR +Y L + + IP I
Sbjct: 394 ESGLESLVIVPTSKSSANQRAGRAGRSRAGKCYR---LYTELTYEKLLPDQTIPEI 446
Score = 317 (116.6 bits), Expect = 1.1e-46, Sum P(2) = 1.1e-46
Identities = 61/112 (54%), Positives = 86/112 (76%)
Query: 587 QYLLEAGWCYDTKLIGITEPRRISVTSLANRVSEEL-RTTLGHTVGYTIRFDDCTTEDVT 645
QYL E+GW + I T+PRR++ SLA RV++E+ +G TVGY++RFD+ ++ T
Sbjct: 90 QYLFESGWSDGFRTILCTQPRRVAAISLAERVAQEMGEQHVGKTVGYSVRFDEKISDIET 149
Query: 646 KIKYMTEGILMREMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKILKDK 697
+IKY+T+G+L+REMM DPLL KYSVIM+DE HER++ TD+LMGLLKK+ K +
Sbjct: 150 RIKYVTDGMLIREMMLDPLLLKYSVIMIDEAHERSLQTDLLMGLLKKVQKKR 201
Score = 256 (95.2 bits), Expect = 1.7e-60, Sum P(4) = 1.7e-60
Identities = 56/169 (33%), Positives = 96/169 (56%)
Query: 691 KKILKDKERDFECSDEIASILSLLQVQDIFIKPSSGALSLKARVLRRNFEVEQGDLLTLL 750
K I++ F CSDE +I ++L +Q +F + + R++ V++GD LTLL
Sbjct: 518 KMIIQSSSNGFNCSDECITITAMLNIQGLFTNQNHKS--------RKHLLVKEGDHLTLL 569
Query: 751 NIFKFYEKQENKKQFCHKYFFNYKVLKRAAELKNQMILLLKKSSIPLVT---SPRN---- 803
NIF + ++ Q+C+++ NYK ++R +++ Q++ KK SI +++ S N
Sbjct: 570 NIFNSFISNQSSPQWCNQHQINYKAMQRVLQVRKQLLAYAKKYSINVISCFDSNNNREQC 629
Query: 804 TNAVLKCLTNGFFSNAAYLHYSGVYRTVRGNEDLYIHPSSVLYTLQQPQ 852
+N + K + +GFF+NAA L G Y+T+R L++HP+SVL PQ
Sbjct: 630 SNLIRKAIVSGFFTNAAQLQPDGSYQTIREKHKLWLHPTSVLCLSNSPQ 678
Score = 247 (92.0 bits), Expect = 4.9e-45, Sum P(3) = 4.9e-45
Identities = 52/102 (50%), Positives = 69/102 (67%)
Query: 43 KFSRLYTEASFSQL-NECTPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRVA 101
K RLYTE ++ +L + T PE+QR+ L++ +LQLKALGI NIL F F S PP+ +L
Sbjct: 424 KCYRLYTELTYEKLLPDQTIPEIQRSNLTNTILQLKALGIDNILNFDFISQPPSSSLIRG 483
Query: 102 LELLYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLLSSGS 143
LE+LY LGA+D NG LT P G MAE P P +K+++ S S
Sbjct: 484 LEVLYGLGALDDNGKLTNPTGMIMAEFPTDPTFSKMIIQSSS 525
Score = 104 (41.7 bits), Expect = 1.7e-60, Sum P(4) = 1.7e-60
Identities = 21/46 (45%), Positives = 32/46 (69%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILMECSRKFSR 46
+T+G+LI DP + KYSVIM+D+ HER++ TD+LM +K +
Sbjct: 154 VTDGMLIREMMLDPLLLKYSVIMIDEAHERSLQTDLLMGLLKKVQK 199
Score = 41 (19.5 bits), Expect = 2.0e-23, Sum P(4) = 2.0e-23
Identities = 14/47 (29%), Positives = 20/47 (42%)
Query: 582 FFSFFQYLLEAGWCYDTKLIGITEPRR--ISVTSLANRVSEELRTTL 626
FF+FF Y DT I E R + + L S ++TT+
Sbjct: 228 FFNFFNYNQTNDKSKDTSTILSIEGRTYPVDIHYLEESTSNYIQTTI 274
Score = 38 (18.4 bits), Expect = 1.7e-60, Sum P(4) = 1.7e-60
Identities = 10/26 (38%), Positives = 14/26 (53%)
Query: 642 EDVTKIKYMTEGILMREMMTDPLLRK 667
+D K+ T G++M E TDP K
Sbjct: 494 DDNGKLTNPT-GMIMAEFPTDPTFSK 518
>WB|WBGene00022056 [details] [associations]
symbol:Y67D2.6 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
GeneTree:ENSGT00700000104241 EMBL:FO081642 RefSeq:NP_497420.1
ProteinModelPortal:Q9BKQ8 SMR:Q9BKQ8 MINT:MINT-1068531
STRING:Q9BKQ8 PaxDb:Q9BKQ8 EnsemblMetazoa:Y67D2.6 GeneID:175308
KEGG:cel:CELE_Y67D2.6 UCSC:Y67D2.6 CTD:175308 WormBase:Y67D2.6
InParanoid:Q9BKQ8 KO:K13117 OMA:NIFVVPP NextBio:887600
Uniprot:Q9BKQ8
Length = 732
Score = 353 (129.3 bits), Expect = 2.2e-59, Sum P(3) = 2.2e-59
Identities = 76/183 (41%), Positives = 115/183 (62%)
Query: 348 RTQLKLIISSATVDAEEICQFYNISASSN-----ATILSVKGHLYPVSVYYSNDPVVNYV 402
R L++I+SSAT+DAE F+ ++ + N A I+SV+G +PV+V+++ V +Y
Sbjct: 221 RNDLRIIVSSATLDAELFKDFFEMNETGNSDKDTAGIISVEGRTHPVAVHHTKTSVPDYC 280
Query: 403 QGVVDTAIKIHESMPVGDILAFVIGLEQIEHIIGILKQYHNQREDL-KLLILPMHGSLPN 461
Q VDT I IH+ GDIL F+ G +++E + L++ ++ +L ++P +G+LP
Sbjct: 281 QSAVDTVINIHKHENPGDILVFLTGQDEVEDVCEKLRELAGNLKNCDRLWVVPCYGALPA 340
Query: 462 NEQIKVFRPTPRAMRKIVIATNIAETSITIPGIVYVIDPGFVKARWFNPNTLTNSLVVVP 521
EQ+K F TP RK+V+ATNIAE SITIPGI YVID G+VK R + +L+ V
Sbjct: 341 REQMKAFDSTPHGTRKVVVATNIAEASITIPGICYVIDTGYVKLRAQHAANGVETLMRVT 400
Query: 522 ISK 524
+SK
Sbjct: 401 VSK 403
Score = 351 (128.6 bits), Expect = 1.8e-52, Sum P(2) = 1.8e-52
Identities = 65/109 (59%), Positives = 89/109 (81%)
Query: 587 QYLLEAGWCYDTKLIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTK 646
Q+LLEAGW D + I IT+PRR++V +LA RV+EE LGH VGYT+RFDD + +D TK
Sbjct: 112 QFLLEAGWAADGRQIVITQPRRVAVVTLATRVAEEKDCILGHDVGYTVRFDDVSDKD-TK 170
Query: 647 IKYMTEGILMREMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKILK 695
+K+MT+G+L+RE++ DPLL KYS+IM+DE HER+ TDIL+GLL+KI++
Sbjct: 171 VKFMTDGLLLREILADPLLSKYSIIMIDEAHERSCNTDILLGLLRKIIQ 219
Score = 275 (101.9 bits), Expect = 2.2e-59, Sum P(3) = 2.2e-59
Identities = 61/161 (37%), Positives = 99/161 (61%)
Query: 697 KERDFECSDEIASILSLLQVQDIFIKPSSGALSLKARVLRRNFEVEQGDLLTLLNIF-KF 755
K +F CS E+ +I++++Q+QD+FI P +A V+R+ F VE+GD +T+LN+F KF
Sbjct: 517 KSAEFGCSTEMVTIVAMMQIQDVFITPYRQRH--QADVIRKKFAVEEGDHMTMLNVFTKF 574
Query: 756 YEKQENKKQFCHKYFFNYKVLKRAAELKNQMILLLKKSSIPLVTSPRNTNA---VLKCLT 812
E +KK +C +F NY+ L RA +++Q++ LLK+ I V+S N + +CL
Sbjct: 575 VENGRSKK-WCSDHFVNYRGLMRADNVRSQLVRLLKRFEIEKVSSRGLINCSENIRQCLV 633
Query: 813 NGFFSNAAYLHYSGVYRTVRGNEDLYIHP-SSVLYTLQQPQ 852
GFFS AA HY+G Y TV+ + ++ SS+++ P+
Sbjct: 634 TGFFSQAAQYHYTGKYMTVKESFPFNMYKGSSIMFKKDYPK 674
Score = 254 (94.5 bits), Expect = 2.9e-48, Sum P(3) = 2.9e-48
Identities = 51/99 (51%), Positives = 68/99 (68%)
Query: 43 KFSRLYTEASFSQLNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRVAL 102
K RLY E+ F + E T PE+QR +++S +LQLKALG+ N+ RF + SPPP+ + L
Sbjct: 420 KCYRLYPESEFERFAEGTVPEIQRCQMASTILQLKALGVQNVHRFHYLSPPPSWAMINGL 479
Query: 103 ELLYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLLSS 141
ELLY+LGA+D LT P+G MAE PL P+H+K LL S
Sbjct: 480 ELLYALGAIDETSQLTSPLGLQMAEFPLPPMHSKCLLKS 518
Score = 108 (43.1 bits), Expect = 2.2e-59, Sum P(3) = 2.2e-59
Identities = 21/47 (44%), Positives = 32/47 (68%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILMECSRKFSRL 47
MT+G+L+ DP + KYS+IM+D+ HER+ TDIL+ RK ++
Sbjct: 174 MTDGLLLREILADPLLSKYSIIMIDEAHERSCNTDILLGLLRKIIQI 220
Score = 37 (18.1 bits), Expect = 4.9e-19, Sum P(2) = 4.9e-19
Identities = 8/22 (36%), Positives = 12/22 (54%)
Query: 472 PRAMRKIVIATNIAETSITIPG 493
PR + + +AT +AE I G
Sbjct: 131 PRRVAVVTLATRVAEEKDCILG 152
>DICTYBASE|DDB_G0285937 [details] [associations]
symbol:dhx16 "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=IEA;ISS] [GO:0003724 "RNA helicase
activity" evidence=ISS] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR002483 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01480
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 dictyBase:DDB_G0285937 GO:GO:0005524
GO:GO:0005634 GenomeReviews:CM000153_GR GO:GO:0008380 GO:GO:0006397
GO:GO:0003676 EMBL:AAFI02000082 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 Gene3D:1.20.1390.10 KO:K12813 GO:GO:0003724
RefSeq:XP_638017.1 EnsemblProtists:DDB0233398 GeneID:8625368
KEGG:ddi:DDB_G0285937 OMA:YLLEREV Uniprot:Q54MH3
Length = 1106
Score = 363 (132.8 bits), Expect = 1.0e-58, Sum P(3) = 1.0e-58
Identities = 75/179 (41%), Positives = 113/179 (63%)
Query: 348 RTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYYSNDPVVNYVQGVVD 407
R LKL+ISSAT+DAE +++ A ++ G Y V+ +Y+ P +Y+ V
Sbjct: 610 RPDLKLLISSATMDAERFSDYFD-----GAPTFNIPGRKYEVTTHYTQAPEADYLDAAVV 664
Query: 408 TAIKIHESMPVGDILAFVIGLEQIEHIIGILK-QYHNQREDLK-LLILPMHGSLPNNEQI 465
T ++IH + P+GDIL F+ G E+++ +L+ + +K L+I ++ +LP + Q
Sbjct: 665 TVLQIHITEPLGDILVFLTGQEEVDQAAEMLQTRTRGLGTKIKELIITRIYSTLPTDLQA 724
Query: 466 KVFRPTPRAMRKIVIATNIAETSITIPGIVYVIDPGFVKARWFNPNTLTNSLVVVPISK 524
K+F PTP RK+V+ATNIAETS+TI GI+YVIDPGF K + FNP T SLV+ P+S+
Sbjct: 725 KIFEPTPPNARKVVLATNIAETSLTIDGIIYVIDPGFCKQKMFNPRTGMESLVITPVSR 783
Score = 292 (107.8 bits), Expect = 7.5e-45, Sum P(3) = 7.5e-45
Identities = 59/109 (54%), Positives = 82/109 (75%)
Query: 587 QYLLEAGWCYDTKLIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTK 646
QYL EAG+ K IG T+PRR++ S+A RV+EE+ LG+ VGY+IRF+DCT++ T
Sbjct: 502 QYLHEAGFSKTGK-IGCTQPRRVAAMSVAARVAEEVGCKLGNEVGYSIRFEDCTSQK-TV 559
Query: 647 IKYMTEGILMREMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKILK 695
++YMT+G+L+RE +T P L YSV+++DE HERT+ TDIL GLLK I +
Sbjct: 560 LQYMTDGMLVREFLTAPDLASYSVLIIDEAHERTLHTDILFGLLKDITR 608
Score = 283 (104.7 bits), Expect = 1.0e-58, Sum P(3) = 1.0e-58
Identities = 61/163 (37%), Positives = 105/163 (64%)
Query: 690 LKKILKDKERDFECSDEIASILSLLQVQD-IFIKPSSGALSLKARVLRRNFEVEQGDLLT 748
L K++ E+ ++CS+EI +I ++L V + IF +P A + A R+ F QGD LT
Sbjct: 891 LSKMIIASEK-YKCSEEILTICAMLSVGNTIFYRPKDKAFAADAA--RKLFFHPQGDHLT 947
Query: 749 LLNIFKFYEKQENKKQFCHKYFFNYKVLKRAAELKNQMILLLKKSSIPLVTSPRNTNAVL 808
L+N+F + + Q+C + F ++ +KRA ++++Q+ LLL++ IPLV++ +T+++
Sbjct: 948 LMNVFNQWRESGYAVQWCFENFIQHRSMKRAQDVRDQLELLLERVEIPLVSNVDDTDSIR 1007
Query: 809 KCLTNGFFSNAAYLHYSGVYRTVRGNEDLYIHPSSVLYTLQQP 851
KC+ +GFF N+A L SG++RT + N+ + IHPSS L+ Q P
Sbjct: 1008 KCIASGFFYNSAKLEKSGLFRTTKHNQSVQIHPSSCLF--QSP 1048
Score = 223 (83.6 bits), Expect = 1.5e-43, Sum P(3) = 1.5e-43
Identities = 48/100 (48%), Positives = 70/100 (70%)
Query: 43 KFSRLYTEASF-SQLNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRVA 101
K RL+T +F ++L E T PE+QRT L + VL LK++GI++++ F F PPPAQ L A
Sbjct: 800 KCFRLFTAWAFDNELEENTIPEIQRTNLGNVVLLLKSMGINDLMNFDFMDPPPAQTLIAA 859
Query: 102 LELLYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLLSS 141
LE LY+LGA++ G LTK +G MAE P+ P +K++++S
Sbjct: 860 LEQLYALGALNDRGQLTK-LGRKMAEFPVDPQLSKMIIAS 898
Score = 94 (38.1 bits), Expect = 1.0e-58, Sum P(3) = 1.0e-58
Identities = 18/46 (39%), Positives = 29/46 (63%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILMECSRKFSR 46
MT+G+L+ P + YSV+++D+ HERT+ TDIL + +R
Sbjct: 563 MTDGMLVREFLTAPDLASYSVLIIDEAHERTLHTDILFGLLKDITR 608
Score = 44 (20.5 bits), Expect = 4.3e-19, Sum P(3) = 4.3e-19
Identities = 10/19 (52%), Positives = 12/19 (63%)
Query: 434 IIGILKQYHNQREDLKLLI 452
+ G+LK R DLKLLI
Sbjct: 599 LFGLLKDITRFRPDLKLLI 617
Score = 41 (19.5 bits), Expect = 1.2e-24, Sum P(3) = 1.2e-24
Identities = 10/23 (43%), Positives = 13/23 (56%)
Query: 137 VLLSSGSVLDSAVEILLHRLRGL 159
V L+ +D A E+L R RGL
Sbjct: 680 VFLTGQEEVDQAAEMLQTRTRGL 702
Score = 37 (18.1 bits), Expect = 9.2e-53, Sum P(3) = 9.2e-53
Identities = 10/32 (31%), Positives = 20/32 (62%)
Query: 329 QDV-IGEDMKAFAEQLKPLKRTQLKLIISSAT 359
QD I + K+FA++L + +++ I SS++
Sbjct: 51 QDFPINSNTKSFAQELLNKSQQKIQNITSSSS 82
>POMBASE|SPAC20H4.09 [details] [associations]
symbol:SPAC20H4.09 "ATP-dependent RNA helicase,
spliceosomal (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IC;ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005681 "spliceosomal complex" evidence=ISS]
[GO:0005829 "cytosol" evidence=IDA] [GO:0045292 "mRNA cis splicing,
via spliceosome" evidence=ISS] [GO:0071276 "cellular response to
cadmium ion" evidence=IMP] [GO:0071585 "detoxification of cadmium
ion" evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 PomBase:SPAC20H4.09
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 EMBL:CU329670
GO:GO:0008380 GO:GO:0071276 GO:GO:0071585 GO:GO:0006397
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 RefSeq:NP_593629.1 ProteinModelPortal:Q9HE06
EnsemblFungi:SPAC20H4.09.1 GeneID:2542874 KEGG:spo:SPAC20H4.09
OMA:NYSVIIL OrthoDB:EOG4BGD47 NextBio:20803914 Uniprot:Q9HE06
Length = 647
Score = 362 (132.5 bits), Expect = 1.4e-58, Sum P(3) = 1.4e-58
Identities = 78/200 (39%), Positives = 115/200 (57%)
Query: 347 KRTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYYSNDPVVNYVQGVV 406
KR +L++SSA+VDA ++ QF+ +S++G L+PV + P NYV +
Sbjct: 168 KRNDFRLVLSSASVDANKLSQFFG---QDKVCTMSIEGKLFPVETLFLQKPTENYVDSAI 224
Query: 407 DTAIKIHESMPVGDILAFVIGLEQIEHIIGILKQ-YHNQREDLKLLI-LPMHGSLPNNEQ 464
+T I I+ + P GDIL F+ G ++IE+ I ++ + ED + L+ LP+H L +EQ
Sbjct: 225 ETVININSTYPPGDILVFLSGRKEIEYCIKKIEDSLIHASEDCQTLVPLPLHAGLTVDEQ 284
Query: 465 IKVFRPTPRAMRKIVIATNIAETSITIPGIVYVIDPGFVKARWFNPNTLTNSLVVVPISK 524
++VF RK++ +TNIAETSITI GIVYV+D GF K R +NP T T+ L+ VPISK
Sbjct: 285 MRVFNIYDGDFRKVIFSTNIAETSITIDGIVYVVDSGFNKQRIYNPYTRTSKLINVPISK 344
Query: 525 XXXXXXXXXXXXXXXXHVYR 544
V+R
Sbjct: 345 SSAIQRSGRAGRTMRGKVFR 364
Score = 313 (115.2 bits), Expect = 2.6e-45, Sum P(2) = 2.6e-45
Identities = 63/124 (50%), Positives = 87/124 (70%)
Query: 587 QYLLEAGWCYDTKLIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTK 646
Q+L EAGW +IG T+PRR+ S++ RVS EL + G GY+I+FD +E TK
Sbjct: 60 QFLYEAGWASQNGIIGCTQPRRLVAKSVSERVSLELNSPPGSLCGYSIQFDHNVSEK-TK 118
Query: 647 IKYMTEGILMREMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKILKDKERDFECSDE 706
IKYMT+GIL+ E+ DPLL +YS+++LDEVHERT+ TD+L+G+LK+IL +K DF
Sbjct: 119 IKYMTDGILLNEIFFDPLLERYSIVILDEVHERTLSTDLLLGVLKRIL-EKRNDFRLVLS 177
Query: 707 IASI 710
AS+
Sbjct: 178 SASV 181
Score = 245 (91.3 bits), Expect = 1.4e-58, Sum P(3) = 1.4e-58
Identities = 51/153 (33%), Positives = 89/153 (58%)
Query: 701 FECSDEIASILSLLQVQDIFIKPSSGALSLKARVLRRNFEVEQGDLLTLLNIFKFYEKQE 760
F C+ EI SI S+L ++F P+S + + A V +F +GD++T LN+F+ + +
Sbjct: 462 FGCTHEILSIASILTAGEVFYNPTSSSKN-DAFVAHSSFFANEGDIITALNVFESFVGNK 520
Query: 761 NKKQFCHKYFFNYKVLKRAAELKNQMILLLKKSSIPLVTS-PRNT-NAVLKCLTNGFFSN 818
Q+C K + NY+ L++A +++ ++ L K SIP P + + +LKCL +GF N
Sbjct: 521 KDLQWCRKNYLNYQTLRQALDIRTHLVRFLNKFSIPTAQRLPSSDCSKILKCLLDGFVRN 580
Query: 819 AAYLHYSGVYRTVRGNEDLYIHPSSVLYTLQQP 851
A+L G Y+T+ G + +++ SSVL+ + P
Sbjct: 581 VAHLQNDGSYKTI-GGKQVWLDSSSVLHEKKTP 612
Score = 174 (66.3 bits), Expect = 1.3e-37, Sum P(3) = 1.3e-37
Identities = 42/99 (42%), Positives = 59/99 (59%)
Query: 43 KFSRLYTEASFSQLNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRVAL 102
K RLYTE ++S + E ++ ++S VL LK LG+ NIL+F F PP +L AL
Sbjct: 361 KVFRLYTEKAYSLMKEEFEADILNCDMSPLVLFLKGLGLKNILQFPFFVRPPTVHLMAAL 420
Query: 103 ELLYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLLSS 141
E LY LG +D +GNLT P+G ++ L +K LL+S
Sbjct: 421 EDLYLLGVLDESGNLTDPLGIQISNSFLDANISKALLTS 459
Score = 115 (45.5 bits), Expect = 1.4e-58, Sum P(3) = 1.4e-58
Identities = 20/38 (52%), Positives = 31/38 (81%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILM 38
MT+GIL+ DP +E+YS+++LD+VHERT+ TD+L+
Sbjct: 122 MTDGILLNEIFFDPLLERYSIVILDEVHERTLSTDLLL 159
Score = 40 (19.1 bits), Expect = 1.0e-23, Sum P(3) = 1.0e-23
Identities = 6/19 (31%), Positives = 14/19 (73%)
Query: 434 IIGILKQYHNQREDLKLLI 452
++G+LK+ +R D +L++
Sbjct: 158 LLGVLKRILEKRNDFRLVL 176
>UNIPROTKB|F5H658 [details] [associations]
symbol:DHX8 "ATP-dependent RNA helicase DHX8" species:9606
"Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003029 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00575
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0005634
GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR022967 SMART:SM00316
HGNC:HGNC:2749 EMBL:AC068675 EMBL:AC087650 IPI:IPI01010550
ProteinModelPortal:F5H658 SMR:F5H658 Ensembl:ENST00000540306
UCSC:uc010wig.2 ArrayExpress:F5H658 Bgee:F5H658 Uniprot:F5H658
Length = 1181
Score = 371 (135.7 bits), Expect = 2.8e-55, Sum P(3) = 2.8e-55
Identities = 84/222 (37%), Positives = 129/222 (58%)
Query: 347 KRTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYYSNDPVVNYVQGVV 406
KR +KLI++SAT+DA + Q++ A I ++ G YPV + Y+ +P +Y+ +
Sbjct: 707 KRQDMKLIVTSATLDAVKFSQYFY-----EAPIFTIPGRTYPVEILYTKEPETDYLDASL 761
Query: 407 DTAIKIHESMPVGDILAFVIGLEQIEHIIGIL-KQYHNQREDL-KLLILPMHGSLPNNEQ 464
T ++IH + P GDIL F+ G E+I+ IL ++ + D+ +L+ILP++ +LP+ Q
Sbjct: 762 ITVMQIHLTEPPGDILVFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQ 821
Query: 465 IKVFRPTPRAMRKIVIATNIAETSITIPGIVYVIDPGFVKARWFNPNTLTNSLVVVPISK 524
++F P P RK+VIATNIAETS+TI GI YV+DPGFVK + +N T + LVV PIS+
Sbjct: 822 TRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQ 881
Query: 525 XXXXXXXXXXXXXXXXHVYRKNFMYN-RLFIHFCVSRNIPTI 565
YR +Y R + ++ N+P I
Sbjct: 882 AQAKQRAGRAGRTGPGKCYR---LYTERAYRDEMLTTNVPEI 920
Score = 321 (118.1 bits), Expect = 1.6e-42, Sum P(3) = 1.6e-42
Identities = 66/116 (56%), Positives = 86/116 (74%)
Query: 587 QYLLEAGWCYDTKLIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTK 646
QYL EAG+ K IG T+PRR++ S+A RVSEE LG VGYTIRF+DCT+ + T
Sbjct: 600 QYLAEAGYTSRGK-IGCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPE-TV 657
Query: 647 IKYMTEGILMREMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKILKDKERDFE 702
IKYMT+G+L+RE + DP L +Y++IMLDE HERTI TD+L GLLKK ++ K +D +
Sbjct: 658 IKYMTDGMLLRECLIDPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQ-KRQDMK 712
Score = 231 (86.4 bits), Expect = 2.8e-55, Sum P(3) = 2.8e-55
Identities = 47/151 (31%), Positives = 88/151 (58%)
Query: 703 CSDEIASILSLLQVQDIFIKPSSGALSLKARVLRRNFEVEQGDLLTLLNIFKFYEKQENK 762
CS+E+ +I+S+L VQ++F +P + + F +GD LTLL ++ ++ +
Sbjct: 1001 CSEEMLTIVSMLSVQNVFYRPKDKQALADQK--KAKFHQTEGDHLTLLAVYNSWKNNKFS 1058
Query: 763 KQFCHKYFFNYKVLKRAAELKNQMILLLKKSSIPLVTSPRNTNAVLKCLTNGFFSNAAYL 822
+C++ F + L+RA +++ QM+ ++ + + +V+ ++T V K + +GFF NAA
Sbjct: 1059 NPWCYENFIQARSLRRAQDIRKQMLGIMDRHKLDVVSCGKSTVRVQKAICSGFFRNAAKK 1118
Query: 823 HYSGVYRTVRGNEDLYIHPSSVLYTLQQPQC 853
YRT+ + +YIHPSS L+ +QP+C
Sbjct: 1119 DPQEGYRTLIDQQVVYIHPSSALFN-RQPEC 1148
Score = 216 (81.1 bits), Expect = 3.1e-38, Sum P(3) = 3.1e-38
Identities = 47/100 (47%), Positives = 66/100 (66%)
Query: 43 KFSRLYTEASF-SQLNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRVA 101
K RLYTE ++ ++ PE+QRT L+S VL LKA+GI+++L F F PP + L A
Sbjct: 898 KCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPMETLITA 957
Query: 102 LELLYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLLSS 141
+E LY+LGA+D G LT+ +G MAE PL P+ K+L+ S
Sbjct: 958 MEQLYTLGALDDEGLLTR-LGRRMAEFPLEPMLCKMLIMS 996
Score = 106 (42.4 bits), Expect = 2.8e-55, Sum P(3) = 2.8e-55
Identities = 20/43 (46%), Positives = 30/43 (69%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILMECSRK 43
MT+G+L+ DP + +Y++IMLD+ HERTI TD+L +K
Sbjct: 661 MTDGMLLRECLIDPDLTQYAIIMLDEAHERTIHTDVLFGLLKK 703
Score = 45 (20.9 bits), Expect = 1.8e-13, Sum P(3) = 1.8e-13
Identities = 7/19 (36%), Positives = 15/19 (78%)
Query: 434 IIGILKQYHNQREDLKLLI 452
+ G+LK+ +R+D+KL++
Sbjct: 697 LFGLLKKTVQKRQDMKLIV 715
Score = 43 (20.2 bits), Expect = 2.5e-20, Sum P(3) = 2.5e-20
Identities = 10/27 (37%), Positives = 16/27 (59%)
Query: 137 VLLSSGSVLDSAVEILLHRLRGLCDNV 163
V L+ +D+A EIL R++ L +V
Sbjct: 778 VFLTGQEEIDTACEILYERMKSLGPDV 804
Score = 37 (18.1 bits), Expect = 4.5e-48, Sum P(3) = 4.5e-48
Identities = 9/29 (31%), Positives = 12/29 (41%)
Query: 226 PDMPYQLRYIGQPEMGVGDKARPTIVRSS 254
PD P L + PE+ R + R S
Sbjct: 367 PDRPTHLSLVSAPEVEDDSLERKRLTRIS 395
>FB|FBgn0086444 [details] [associations]
symbol:l(2)37Cb "lethal (2) 37Cb" species:7227 "Drosophila
melanogaster" [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC;ISS] [GO:0005681 "spliceosomal complex" evidence=ISS]
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
[GO:0022008 "neurogenesis" evidence=IMP] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:AE014134 GO:GO:0022008 GO:GO:0003676 GO:GO:0071011
GO:GO:0000398 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 KO:K12813 GO:GO:0016779 GeneTree:ENSGT00700000104241
OMA:GTLHREF EMBL:AY061330 RefSeq:NP_609946.1 UniGene:Dm.468
SMR:Q9VIZ3 IntAct:Q9VIZ3 MINT:MINT-318410 STRING:Q9VIZ3
EnsemblMetazoa:FBtr0081163 GeneID:35192 KEGG:dme:Dmel_CG10689
UCSC:CG10689-RA FlyBase:FBgn0086444 InParanoid:Q9VIZ3
OrthoDB:EOG459ZWG GenomeRNAi:35192 NextBio:792305 Uniprot:Q9VIZ3
Length = 894
Score = 376 (137.4 bits), Expect = 4.2e-55, Sum P(3) = 4.2e-55
Identities = 78/182 (42%), Positives = 119/182 (65%)
Query: 348 RTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYYSNDPVVNYVQGVVD 407
R +LKL+ISSAT+DAE+ F++ +A I + G YPV ++Y+ P +Y+
Sbjct: 396 RPELKLLISSATLDAEKFSAFFD-----DAPIFRIPGRRYPVDIFYTKAPEADYIDACCV 450
Query: 408 TAIKIHESMPVGDILAFVIGLEQIEHIIGILKQYHNQREDL-----KLLILPMHGSLPNN 462
+ ++IH + P+GDIL F+ G ++IE +L H++ + L +L+++P++ +LP++
Sbjct: 451 SVLQIHATQPLGDILVFLTGQDEIETCQEVL---HDRVKRLGSKIRELIVIPVYANLPSD 507
Query: 463 EQIKVFRPTPRAMRKIVIATNIAETSITIPGIVYVIDPGFVKARWFNPNTLTNSLVVVPI 522
Q K+F PTP RK+++ATNIAETS+TI I+YVIDPGF K FN T SL+VVPI
Sbjct: 508 MQAKIFEPTPPNARKVILATNIAETSLTIDNIIYVIDPGFAKQNNFNSRTGMESLMVVPI 567
Query: 523 SK 524
SK
Sbjct: 568 SK 569
Score = 313 (115.2 bits), Expect = 3.3e-43, Sum P(2) = 3.3e-43
Identities = 60/109 (55%), Positives = 84/109 (77%)
Query: 587 QYLLEAGWCYDTKLIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTK 646
QYL+EAG+ D K+IG T+PRR++ S+A RV+EE+ LG+ VGY+IRF+DCT+ D T
Sbjct: 287 QYLVEAGFTKDKKMIGCTQPRRVAAMSVAARVAEEMGVKLGNEVGYSIRFEDCTS-DRTI 345
Query: 647 IKYMTEGILMREMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKILK 695
+KYMT+G L RE +++P L YSV+++DE HERT+ TDIL GL+K I +
Sbjct: 346 LKYMTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIAR 394
Score = 231 (86.4 bits), Expect = 4.2e-55, Sum P(3) = 4.2e-55
Identities = 52/164 (31%), Positives = 95/164 (57%)
Query: 684 DILMGLLKKILKDKERDFECSDEIASILSLLQVQD-IFIKPSSGALSLKARVLRRNFEVE 742
D +MG K+L E+ ++CS+E+ +I ++L V IF +P + A R+NF
Sbjct: 674 DPMMG---KMLLASEK-YKCSEEMVTIAAMLSVNSAIFYRPKDKIIH--ADTARKNFNHM 727
Query: 743 QGDLLTLLNIFKFYEKQENKKQFCHKYFFNYKVLKRAAELKNQMILLLKKSSIPLVTSPR 802
GD L+LL ++ + + + Q+C++ F Y+ +KRA +++ Q++ L+++ I +V+
Sbjct: 728 HGDHLSLLQVYNQWAETDYSTQWCYENFIQYRSMKRARDVREQLVGLMQRVEIDMVSCLP 787
Query: 803 NTNAVLKCLTNGFFSNAAYLHYSGVYRTVRGNEDLYIHPSSVLY 846
T V K T G+F + A L G Y+T++ N+ + IHP+S L+
Sbjct: 788 ETVNVRKAATAGYFYHVARLSKGGHYKTIKHNQTVMIHPNSSLF 831
Score = 226 (84.6 bits), Expect = 2.5e-38, Sum P(3) = 2.5e-38
Identities = 49/100 (49%), Positives = 70/100 (70%)
Query: 43 KFSRLYTEASFS-QLNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRVA 101
K RLYT ++ +L + T PE+QR L +AVL LKALGI++++ F F PPP + L +A
Sbjct: 586 KCFRLYTAWAYKHELEDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLA 645
Query: 102 LELLYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLLSS 141
LE LY+LGA++ +G LTK +G MAE P+ P+ K+LL+S
Sbjct: 646 LEQLYALGALNHHGELTK-LGRRMAEFPVDPMMGKMLLAS 684
Score = 92 (37.4 bits), Expect = 4.2e-55, Sum P(3) = 4.2e-55
Identities = 19/50 (38%), Positives = 29/50 (58%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILMECSRKFSRLYTE 50
MT+G L +P + YSV+++D+ HERT+ TDIL + +R E
Sbjct: 349 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIARFRPE 398
Score = 37 (18.1 bits), Expect = 5.9e-14, Sum P(2) = 5.9e-14
Identities = 8/19 (42%), Positives = 12/19 (63%)
Query: 434 IIGILKQYHNQREDLKLLI 452
+ G++K R +LKLLI
Sbjct: 385 LFGLVKDIARFRPELKLLI 403
>ZFIN|ZDB-GENE-050809-39 [details] [associations]
symbol:dhx8 "DEAH (Asp-Glu-Ala-His) box polypeptide
8" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0051301 "cell division" evidence=IMP] [GO:0060215
"primitive hemopoiesis" evidence=IMP] [GO:0005634 "nucleus"
evidence=IDA] [GO:0070054 "mRNA splicing, via endonucleolytic
cleavage and ligation" evidence=IMP] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
ZFIN:ZDB-GENE-050809-39 GO:GO:0005524 GO:GO:0005634 GO:GO:0051301
GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR022967 SMART:SM00316
GeneTree:ENSGT00700000104241 KO:K12818 OMA:NAWCYEN CTD:1659
GO:GO:0060215 InterPro:IPR013957 Pfam:PF08648 EMBL:AL833789
IPI:IPI00498887 RefSeq:XP_002663993.1 UniGene:Dr.159472
ProteinModelPortal:E7F7E3 Ensembl:ENSDART00000066282 GeneID:606595
KEGG:dre:606595 NextBio:20892459 Bgee:E7F7E3 GO:GO:0070054
Uniprot:E7F7E3
Length = 1210
Score = 378 (138.1 bits), Expect = 1.2e-54, Sum P(3) = 1.2e-54
Identities = 86/222 (38%), Positives = 130/222 (58%)
Query: 347 KRTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYYSNDPVVNYVQGVV 406
KRT +KLI++SAT+DA + Q++ A I ++ G YPV V Y+ +P +Y+ +
Sbjct: 697 KRTDMKLIVTSATLDAVKFSQYFY-----EAPIFTIPGRTYPVEVLYTKEPETDYLDASL 751
Query: 407 DTAIKIHESMPVGDILAFVIGLEQIEHIIGIL-KQYHNQREDL-KLLILPMHGSLPNNEQ 464
T ++IH + P GDIL F+ G E+I+ IL ++ + D+ +L+ILP++ +LP+ Q
Sbjct: 752 ITVMQIHLTEPPGDILVFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQ 811
Query: 465 IKVFRPTPRAMRKIVIATNIAETSITIPGIVYVIDPGFVKARWFNPNTLTNSLVVVPISK 524
++F P P RK+VIATNIAETS+TI GI YV+DPGFVK + +N T + LVV PIS+
Sbjct: 812 TRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQ 871
Query: 525 XXXXXXXXXXXXXXXXHVYRKNFMYN-RLFIHFCVSRNIPTI 565
YR +Y R + ++ N+P I
Sbjct: 872 AQAKQRAGRAGRTGPGKCYR---LYTERAYRDEMLTTNVPEI 910
Score = 317 (116.6 bits), Expect = 1.3e-41, Sum P(3) = 1.3e-41
Identities = 66/116 (56%), Positives = 85/116 (73%)
Query: 587 QYLLEAGWCYDTKLIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTK 646
QYL EAG+ K IG T+PRR++ S+A RVSEE LG VGYTIRF+DCT+ + T
Sbjct: 590 QYLAEAGYTTRGK-IGCTQPRRVAAMSVAKRVSEEYGCCLGQEVGYTIRFEDCTSPE-TV 647
Query: 647 IKYMTEGILMREMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKILKDKERDFE 702
IKYMT+G+L+RE + DP L +Y++IMLDE HERTI TD+L GLLKK ++ K D +
Sbjct: 648 IKYMTDGMLLRECLIDPDLGQYAIIMLDEAHERTIHTDVLFGLLKKTVQ-KRTDMK 702
Score = 219 (82.2 bits), Expect = 1.2e-54, Sum P(3) = 1.2e-54
Identities = 46/150 (30%), Positives = 86/150 (57%)
Query: 703 CSDEIASILSLLQVQDIFIKPSSGALSLKARVLRRNFEVEQGDLLTLLNIFKFYEKQENK 762
CS+E+ +I+S+L VQ++F +P + + F +GD LTLL ++ ++ +
Sbjct: 991 CSEEMLTIVSMLSVQNVFYRPKDKQALADQK--KAKFHQPEGDHLTLLAVYNSWKNNKFS 1048
Query: 763 KQFCHKYFFNYKVLKRAAELKNQMILLLKKSSIPLVTSPRNTNAVLKCLTNGFFSNAAYL 822
+C++ F + L+RA +++ QM+ ++ + + +V+ + T V K + +GFF NAA
Sbjct: 1049 NPWCYENFIQARSLRRAQDIRKQMLGIMDRHKLDVVSCGKATVRVQKAICSGFFRNAAKK 1108
Query: 823 HYSGVYRTVRGNEDLYIHPSSVLYTLQQPQ 852
YRT+ + +YIHPSS L+ +QP+
Sbjct: 1109 DPQEGYRTLIDQQVVYIHPSSALFN-RQPE 1137
Score = 216 (81.1 bits), Expect = 9.0e-37, Sum P(3) = 9.0e-37
Identities = 47/100 (47%), Positives = 66/100 (66%)
Query: 43 KFSRLYTEASF-SQLNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRVA 101
K RLYTE ++ ++ PE+QRT L+S VL LKA+GI+++L F F PP + L A
Sbjct: 888 KCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPMETLITA 947
Query: 102 LELLYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLLSS 141
+E LY+LGA+D G LT+ +G MAE PL P+ K+L+ S
Sbjct: 948 MEQLYTLGALDDEGLLTR-LGRRMAEFPLEPMLCKMLIMS 986
Score = 105 (42.0 bits), Expect = 1.2e-54, Sum P(3) = 1.2e-54
Identities = 20/43 (46%), Positives = 30/43 (69%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILMECSRK 43
MT+G+L+ DP + +Y++IMLD+ HERTI TD+L +K
Sbjct: 651 MTDGMLLRECLIDPDLGQYAIIMLDEAHERTIHTDVLFGLLKK 693
Score = 45 (20.9 bits), Expect = 2.2e-48, Sum P(3) = 2.2e-48
Identities = 15/51 (29%), Positives = 23/51 (45%)
Query: 272 CRMDFEYISRGYMFRKGRMKILVSKIFKMSQGKPSDSGVEPISQSYLVELS 322
CR D +R M + +K+ + ++ PS SG EP S + E S
Sbjct: 112 CRPD-NPTTRN-MLDEDDVKVAADAMKELEMFMPSVSGTEPSSSKHRSETS 160
Score = 43 (20.2 bits), Expect = 6.9e-19, Sum P(3) = 6.9e-19
Identities = 10/27 (37%), Positives = 16/27 (59%)
Query: 137 VLLSSGSVLDSAVEILLHRLRGLCDNV 163
V L+ +D+A EIL R++ L +V
Sbjct: 768 VFLTGQEEIDTACEILYERMKSLGPDV 794
Score = 42 (19.8 bits), Expect = 1.2e-12, Sum P(3) = 1.2e-12
Identities = 7/19 (36%), Positives = 14/19 (73%)
Query: 434 IIGILKQYHNQREDLKLLI 452
+ G+LK+ +R D+KL++
Sbjct: 687 LFGLLKKTVQKRTDMKLIV 705
>FB|FBgn0086895 [details] [associations]
symbol:pea "peanuts" species:7227 "Drosophila melanogaster"
[GO:0007286 "spermatid development" evidence=IMP] [GO:0005681
"spliceosomal complex" evidence=ISS] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IC;ISS] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IC] [GO:0000381 "regulation of alternative mRNA
splicing, via spliceosome" evidence=IMP] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] [GO:0071011 "precatalytic
spliceosome" evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 EMBL:AE013599
GO:GO:0005524 GO:GO:0022008 GO:GO:0007286 GO:GO:0003723
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0071011
GO:GO:0000398 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 GO:GO:0000381 InterPro:IPR022967 SMART:SM00316
GeneTree:ENSGT00700000104241 KO:K12818 OMA:NAWCYEN EMBL:BT044222
RefSeq:NP_610928.1 UniGene:Dm.12451 SMR:A1Z9L3 STRING:A1Z9L3
EnsemblMetazoa:FBtr0087518 GeneID:36561 KEGG:dme:Dmel_CG8241
UCSC:CG8241-RA CTD:36561 FlyBase:FBgn0086895 InParanoid:A1Z9L3
OrthoDB:EOG437PVS GenomeRNAi:36561 NextBio:799212 Uniprot:A1Z9L3
Length = 1242
Score = 370 (135.3 bits), Expect = 2.5e-54, Sum P(3) = 2.5e-54
Identities = 79/180 (43%), Positives = 118/180 (65%)
Query: 347 KRTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYYSNDPVVNYVQGVV 406
KR +LKLI++SAT+DA + Q++ A I ++ G +PV V Y+ +P +Y+ +
Sbjct: 728 KRPELKLIVTSATLDAVKFSQYF-----FKAPIFTIPGRTFPVEVLYTKEPETDYLDASL 782
Query: 407 DTAIKIHESMPVGDILAFVIGLEQIEHIIGIL-KQYHNQREDL-KLLILPMHGSLPNNEQ 464
T ++IH P GDIL F+ G E+I+ IL ++ + D+ +L+ILP++ +LP+ Q
Sbjct: 783 ITVMQIHLREPPGDILLFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQ 842
Query: 465 IKVFRPTPRAMRKIVIATNIAETSITIPGIVYVIDPGFVKARWFNPNTLTNSLVVVPISK 524
++F P P RK+VIATNIAETS+TI GI YV+DPGFVK + +N T +SLVV PIS+
Sbjct: 843 TRIFDPAPAGSRKVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 902
Score = 294 (108.6 bits), Expect = 6.0e-40, Sum P(3) = 6.0e-40
Identities = 61/111 (54%), Positives = 80/111 (72%)
Query: 587 QYLLEAGWCYDTKLIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTK 646
QYL E G+ K IG T+PRR++ S+A RV+EE LG VGYTIRF+DCT+ + T
Sbjct: 621 QYLGECGFTARGK-IGCTQPRRVAAMSVAKRVAEEYGCRLGQEVGYTIRFEDCTSPE-TI 678
Query: 647 IKYMTEGILMREMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKILKDK 697
IKYMT+G+L+RE + + L+ YSVIMLDE HERTI TD+L GLLK ++ +
Sbjct: 679 IKYMTDGMLLRECLMEAELKSYSVIMLDEAHERTIHTDVLFGLLKTAVQKR 729
Score = 232 (86.7 bits), Expect = 2.5e-54, Sum P(3) = 2.5e-54
Identities = 46/151 (30%), Positives = 90/151 (59%)
Query: 702 ECSDEIASILSLLQVQDIFIKPSSGALSLKARVLRRNFEVEQGDLLTLLNIFKFYEKQEN 761
+CSDEI +I+S+L VQ++F +P + + F +GD LTLL ++ ++ +
Sbjct: 1021 QCSDEILTIVSMLSVQNVFYRPKDKQALADQK--KAKFNQAEGDHLTLLAVYNSWKNNKF 1078
Query: 762 KKQFCHKYFFNYKVLKRAAELKNQMILLLKKSSIPLVTSPRNTNAVLKCLTNGFFSNAAY 821
+C++ F + LKR+ +++ Q++ ++ + + +V++ +N+ + K + +GFF NAA
Sbjct: 1079 SNAWCYENFVQIRTLKRSQDVRKQLLGIMDRHKLDVVSAGKNSVRIQKAICSGFFRNAAK 1138
Query: 822 LHYSGVYRTVRGNEDLYIHPSSVLYTLQQPQ 852
YRT+ ++ +YIHPSS L+ +QP+
Sbjct: 1139 KDPQEGYRTLVDSQVVYIHPSSALFN-RQPE 1168
Score = 215 (80.7 bits), Expect = 2.6e-37, Sum P(3) = 2.6e-37
Identities = 52/111 (46%), Positives = 73/111 (65%)
Query: 43 KFSRLYTEASFSQLNECTP-PEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRVA 101
K RLYTE ++ TP PE+QRT L++ VLQLK +GI+++L F F PP ++L +A
Sbjct: 919 KTYRLYTERAYRDEMLPTPVPEIQRTNLATTVLQLKTMGINDLLHFDFMDAPPVESLVMA 978
Query: 102 LELLYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLLSSGSVLDSAVEIL 152
LE L+SL A+D G LT+ +G MAE PL P +K+L+ S + L + EIL
Sbjct: 979 LEQLHSLSALDDEGLLTR-LGRRMAEFPLEPNLSKMLIMSVA-LQCSDEIL 1027
Score = 98 (39.6 bits), Expect = 2.5e-54, Sum P(3) = 2.5e-54
Identities = 19/37 (51%), Positives = 27/37 (72%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDIL 37
MT+G+L+ + ++ YSVIMLD+ HERTI TD+L
Sbjct: 682 MTDGMLLRECLMEAELKSYSVIMLDEAHERTIHTDVL 718
Score = 41 (19.5 bits), Expect = 6.0e-40, Sum P(3) = 6.0e-40
Identities = 16/57 (28%), Positives = 26/57 (45%)
Query: 312 PISQSYLVELSILAPGGQDVIGEDMKAFAEQLKPLKRTQLKLIISSATVDAEEICQF 368
P S S + L++ G + E K P +R ++K +ISS +D E+ F
Sbjct: 387 PFSSSTSM-LNLQGNGMEGDEHESRKRVTRISSP-ERWEIKQMISSGVLDRSEMPDF 441
Score = 40 (19.1 bits), Expect = 3.2e-19, Sum P(3) = 3.2e-19
Identities = 9/27 (33%), Positives = 16/27 (59%)
Query: 137 VLLSSGSVLDSAVEILLHRLRGLCDNV 163
+ L+ +D+A EIL R++ L +V
Sbjct: 799 LFLTGQEEIDTACEILYERMKSLGPDV 825
Score = 38 (18.4 bits), Expect = 5.1e-19, Sum P(3) = 5.1e-19
Identities = 7/19 (36%), Positives = 13/19 (68%)
Query: 434 IIGILKQYHNQREDLKLLI 452
+ G+LK +R +LKL++
Sbjct: 718 LFGLLKTAVQKRPELKLIV 736
>RGD|1310723 [details] [associations]
symbol:Dhx8 "DEAH (Asp-Glu-Ala-His) box polypeptide 8"
species:10116 "Rattus norvegicus" [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 RGD:1310723
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316
HOVERGEN:HBG039428 GeneTree:ENSGT00700000104241 KO:K12818 CTD:1659
OrthoDB:EOG4D26P2 UniGene:Rn.108087 EMBL:AY383690 IPI:IPI00370026
RefSeq:NP_001041309.1 SMR:Q6TXG4 Ensembl:ENSRNOT00000048140
GeneID:287727 KEGG:rno:287727 UCSC:RGD:1310723 NextBio:626887
Genevestigator:Q6TXG4 Uniprot:Q6TXG4
Length = 1210
Score = 371 (135.7 bits), Expect = 2.7e-54, Sum P(3) = 2.7e-54
Identities = 84/222 (37%), Positives = 129/222 (58%)
Query: 347 KRTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYYSNDPVVNYVQGVV 406
KR +KLI++SAT+DA + Q++ A I ++ G YPV + Y+ +P +Y+ +
Sbjct: 676 KRQDMKLIVTSATLDAVKFSQYFY-----EAPIFTIPGRTYPVEILYTKEPETDYLDASL 730
Query: 407 DTAIKIHESMPVGDILAFVIGLEQIEHIIGIL-KQYHNQREDL-KLLILPMHGSLPNNEQ 464
T ++IH + P GDIL F+ G E+I+ IL ++ + D+ +L+ILP++ +LP+ Q
Sbjct: 731 ITVMQIHLTEPPGDILVFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQ 790
Query: 465 IKVFRPTPRAMRKIVIATNIAETSITIPGIVYVIDPGFVKARWFNPNTLTNSLVVVPISK 524
++F P P RK+VIATNIAETS+TI GI YV+DPGFVK + +N T + LVV PIS+
Sbjct: 791 TRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQ 850
Query: 525 XXXXXXXXXXXXXXXXHVYRKNFMYN-RLFIHFCVSRNIPTI 565
YR +Y R + ++ N+P I
Sbjct: 851 AQAKQRAGRAGRTGPGKCYR---LYTERAYRDEMLTTNVPEI 889
Score = 321 (118.1 bits), Expect = 1.6e-41, Sum P(3) = 1.6e-41
Identities = 66/116 (56%), Positives = 86/116 (74%)
Query: 587 QYLLEAGWCYDTKLIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTK 646
QYL EAG+ K IG T+PRR++ S+A RVSEE LG VGYTIRF+DCT+ + T
Sbjct: 569 QYLAEAGYTSRGK-IGCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPE-TV 626
Query: 647 IKYMTEGILMREMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKILKDKERDFE 702
IKYMT+G+L+RE + DP L +Y++IMLDE HERTI TD+L GLLKK ++ K +D +
Sbjct: 627 IKYMTDGMLLRECLIDPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQ-KRQDMK 681
Score = 222 (83.2 bits), Expect = 2.7e-54, Sum P(3) = 2.7e-54
Identities = 46/150 (30%), Positives = 87/150 (58%)
Query: 703 CSDEIASILSLLQVQDIFIKPSSGALSLKARVLRRNFEVEQGDLLTLLNIFKFYEKQENK 762
CS+E+ +I+S+L VQ++F +P + + F +GD LTLL ++ ++ +
Sbjct: 970 CSEEMLTIVSMLSVQNVFYRPKDKQALADQK--KAKFHQTEGDHLTLLAVYNSWKNNKFS 1027
Query: 763 KQFCHKYFFNYKVLKRAAELKNQMILLLKKSSIPLVTSPRNTNAVLKCLTNGFFSNAAYL 822
+C++ F + L+RA +++ QM+ ++ + + +V+ ++T V K + +GFF NAA
Sbjct: 1028 NPWCYENFIQARSLRRAQDIRKQMLGIMDRHKLDVVSCGKSTVRVQKAICSGFFRNAAKK 1087
Query: 823 HYSGVYRTVRGNEDLYIHPSSVLYTLQQPQ 852
YRT+ + +YIHPSS L+ +QP+
Sbjct: 1088 DPQEGYRTLIDQQVVYIHPSSALFN-RQPE 1116
Score = 216 (81.1 bits), Expect = 3.3e-37, Sum P(3) = 3.3e-37
Identities = 47/100 (47%), Positives = 66/100 (66%)
Query: 43 KFSRLYTEASF-SQLNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRVA 101
K RLYTE ++ ++ PE+QRT L+S VL LKA+GI+++L F F PP + L A
Sbjct: 867 KCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPMETLITA 926
Query: 102 LELLYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLLSS 141
+E LY+LGA+D G LT+ +G MAE PL P+ K+L+ S
Sbjct: 927 MEQLYTLGALDDEGLLTR-LGRRMAEFPLEPMLCKMLIMS 965
Score = 106 (42.4 bits), Expect = 2.7e-54, Sum P(3) = 2.7e-54
Identities = 20/43 (46%), Positives = 30/43 (69%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILMECSRK 43
MT+G+L+ DP + +Y++IMLD+ HERTI TD+L +K
Sbjct: 630 MTDGMLLRECLIDPDLTQYAIIMLDEAHERTIHTDVLFGLLKK 672
Score = 45 (20.9 bits), Expect = 1.8e-12, Sum P(3) = 1.8e-12
Identities = 7/19 (36%), Positives = 15/19 (78%)
Query: 434 IIGILKQYHNQREDLKLLI 452
+ G+LK+ +R+D+KL++
Sbjct: 666 LFGLLKKTVQKRQDMKLIV 684
Score = 43 (20.2 bits), Expect = 2.6e-19, Sum P(3) = 2.6e-19
Identities = 10/27 (37%), Positives = 16/27 (59%)
Query: 137 VLLSSGSVLDSAVEILLHRLRGLCDNV 163
V L+ +D+A EIL R++ L +V
Sbjct: 747 VFLTGQEEIDTACEILYERMKSLGPDV 773
Score = 37 (18.1 bits), Expect = 4.4e-47, Sum P(3) = 4.4e-47
Identities = 9/29 (31%), Positives = 12/29 (41%)
Query: 226 PDMPYQLRYIGQPEMGVGDKARPTIVRSS 254
PD P L + PE+ R + R S
Sbjct: 336 PDRPTHLSLVSAPEVEDDSLERKRLTRIS 364
>UNIPROTKB|F1S1H3 [details] [associations]
symbol:DHX8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
InterPro:IPR022967 SMART:SM00316 GeneTree:ENSGT00700000104241
KO:K12818 OMA:NAWCYEN CTD:1659 EMBL:FP102477 RefSeq:XP_003131427.2
Ensembl:ENSSSCT00000018917 GeneID:100517118 KEGG:ssc:100517118
Uniprot:F1S1H3
Length = 1212
Score = 371 (135.7 bits), Expect = 2.8e-54, Sum P(3) = 2.8e-54
Identities = 84/222 (37%), Positives = 129/222 (58%)
Query: 347 KRTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYYSNDPVVNYVQGVV 406
KR +KLI++SAT+DA + Q++ A I ++ G YPV + Y+ +P +Y+ +
Sbjct: 699 KRQDMKLIVTSATLDAVKFSQYFY-----EAPIFTIPGRTYPVEILYTKEPETDYLDASL 753
Query: 407 DTAIKIHESMPVGDILAFVIGLEQIEHIIGIL-KQYHNQREDL-KLLILPMHGSLPNNEQ 464
T ++IH + P GDIL F+ G E+I+ IL ++ + D+ +L+ILP++ +LP+ Q
Sbjct: 754 ITVMQIHLTEPPGDILVFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQ 813
Query: 465 IKVFRPTPRAMRKIVIATNIAETSITIPGIVYVIDPGFVKARWFNPNTLTNSLVVVPISK 524
++F P P RK+VIATNIAETS+TI GI YV+DPGFVK + +N T + LVV PIS+
Sbjct: 814 TRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQ 873
Query: 525 XXXXXXXXXXXXXXXXHVYRKNFMYN-RLFIHFCVSRNIPTI 565
YR +Y R + ++ N+P I
Sbjct: 874 AQAKQRAGRAGRTGPGKCYR---LYTERAYRDEMLTTNVPEI 912
Score = 321 (118.1 bits), Expect = 1.6e-41, Sum P(3) = 1.6e-41
Identities = 66/116 (56%), Positives = 86/116 (74%)
Query: 587 QYLLEAGWCYDTKLIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTK 646
QYL EAG+ K IG T+PRR++ S+A RVSEE LG VGYTIRF+DCT+ + T
Sbjct: 592 QYLAEAGYTSRGK-IGCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPE-TV 649
Query: 647 IKYMTEGILMREMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKILKDKERDFE 702
IKYMT+G+L+RE + DP L +Y++IMLDE HERTI TD+L GLLKK ++ K +D +
Sbjct: 650 IKYMTDGMLLRECLIDPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQ-KRQDMK 704
Score = 222 (83.2 bits), Expect = 2.8e-54, Sum P(3) = 2.8e-54
Identities = 46/150 (30%), Positives = 87/150 (58%)
Query: 703 CSDEIASILSLLQVQDIFIKPSSGALSLKARVLRRNFEVEQGDLLTLLNIFKFYEKQENK 762
CS+E+ +I+S+L VQ++F +P + + F +GD LTLL ++ ++ +
Sbjct: 993 CSEEMLTIVSMLSVQNVFYRPKDKQALADQK--KAKFHQTEGDHLTLLAVYNSWKNNKFS 1050
Query: 763 KQFCHKYFFNYKVLKRAAELKNQMILLLKKSSIPLVTSPRNTNAVLKCLTNGFFSNAAYL 822
+C++ F + L+RA +++ QM+ ++ + + +V+ ++T V K + +GFF NAA
Sbjct: 1051 NPWCYENFIQARSLRRAQDIRKQMLGIMDRHKLDVVSCGKSTVRVQKAICSGFFRNAAKK 1110
Query: 823 HYSGVYRTVRGNEDLYIHPSSVLYTLQQPQ 852
YRT+ + +YIHPSS L+ +QP+
Sbjct: 1111 DPQEGYRTLIDQQVVYIHPSSALFN-RQPE 1139
Score = 216 (81.1 bits), Expect = 3.3e-37, Sum P(3) = 3.3e-37
Identities = 47/100 (47%), Positives = 66/100 (66%)
Query: 43 KFSRLYTEASF-SQLNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRVA 101
K RLYTE ++ ++ PE+QRT L+S VL LKA+GI+++L F F PP + L A
Sbjct: 890 KCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPMETLITA 949
Query: 102 LELLYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLLSS 141
+E LY+LGA+D G LT+ +G MAE PL P+ K+L+ S
Sbjct: 950 MEQLYTLGALDDEGLLTR-LGRRMAEFPLEPMLCKMLIMS 988
Score = 106 (42.4 bits), Expect = 2.8e-54, Sum P(3) = 2.8e-54
Identities = 20/43 (46%), Positives = 30/43 (69%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILMECSRK 43
MT+G+L+ DP + +Y++IMLD+ HERTI TD+L +K
Sbjct: 653 MTDGMLLRECLIDPDLTQYAIIMLDEAHERTIHTDVLFGLLKK 695
Score = 45 (20.9 bits), Expect = 1.8e-12, Sum P(3) = 1.8e-12
Identities = 7/19 (36%), Positives = 15/19 (78%)
Query: 434 IIGILKQYHNQREDLKLLI 452
+ G+LK+ +R+D+KL++
Sbjct: 689 LFGLLKKTVQKRQDMKLIV 707
Score = 43 (20.2 bits), Expect = 2.6e-19, Sum P(3) = 2.6e-19
Identities = 10/27 (37%), Positives = 16/27 (59%)
Query: 137 VLLSSGSVLDSAVEILLHRLRGLCDNV 163
V L+ +D+A EIL R++ L +V
Sbjct: 770 VFLTGQEEIDTACEILYERMKSLGPDV 796
Score = 37 (18.1 bits), Expect = 4.4e-47, Sum P(3) = 4.4e-47
Identities = 9/29 (31%), Positives = 12/29 (41%)
Query: 226 PDMPYQLRYIGQPEMGVGDKARPTIVRSS 254
PD P L + PE+ R + R S
Sbjct: 359 PDRPTHLSLVSAPEVEDDSLERKRLTRIS 387
>UNIPROTKB|E2R9R9 [details] [associations]
symbol:DHX8 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
InterPro:IPR022967 SMART:SM00316 GeneTree:ENSGT00700000104241
KO:K12818 OMA:NAWCYEN CTD:1659 EMBL:AAEX03006434 EMBL:AAEX03006433
RefSeq:XP_537627.2 ProteinModelPortal:E2R9R9
Ensembl:ENSCAFT00000023129 GeneID:480507 KEGG:cfa:480507
Uniprot:E2R9R9
Length = 1216
Score = 371 (135.7 bits), Expect = 2.8e-54, Sum P(3) = 2.8e-54
Identities = 84/222 (37%), Positives = 129/222 (58%)
Query: 347 KRTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYYSNDPVVNYVQGVV 406
KR +KLI++SAT+DA + Q++ A I ++ G YPV + Y+ +P +Y+ +
Sbjct: 703 KRQDMKLIVTSATLDAVKFSQYFY-----EAPIFTIPGRTYPVEILYTKEPETDYLDASL 757
Query: 407 DTAIKIHESMPVGDILAFVIGLEQIEHIIGIL-KQYHNQREDL-KLLILPMHGSLPNNEQ 464
T ++IH + P GDIL F+ G E+I+ IL ++ + D+ +L+ILP++ +LP+ Q
Sbjct: 758 ITVMQIHLTEPPGDILVFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQ 817
Query: 465 IKVFRPTPRAMRKIVIATNIAETSITIPGIVYVIDPGFVKARWFNPNTLTNSLVVVPISK 524
++F P P RK+VIATNIAETS+TI GI YV+DPGFVK + +N T + LVV PIS+
Sbjct: 818 TRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQ 877
Query: 525 XXXXXXXXXXXXXXXXHVYRKNFMYN-RLFIHFCVSRNIPTI 565
YR +Y R + ++ N+P I
Sbjct: 878 AQAKQRAGRAGRTGPGKCYR---LYTERAYRDEMLTTNVPEI 916
Score = 321 (118.1 bits), Expect = 1.6e-41, Sum P(3) = 1.6e-41
Identities = 66/116 (56%), Positives = 86/116 (74%)
Query: 587 QYLLEAGWCYDTKLIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTK 646
QYL EAG+ K IG T+PRR++ S+A RVSEE LG VGYTIRF+DCT+ + T
Sbjct: 596 QYLAEAGYTSRGK-IGCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPE-TV 653
Query: 647 IKYMTEGILMREMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKILKDKERDFE 702
IKYMT+G+L+RE + DP L +Y++IMLDE HERTI TD+L GLLKK ++ K +D +
Sbjct: 654 IKYMTDGMLLRECLIDPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQ-KRQDMK 708
Score = 222 (83.2 bits), Expect = 2.8e-54, Sum P(3) = 2.8e-54
Identities = 46/150 (30%), Positives = 87/150 (58%)
Query: 703 CSDEIASILSLLQVQDIFIKPSSGALSLKARVLRRNFEVEQGDLLTLLNIFKFYEKQENK 762
CS+E+ +I+S+L VQ++F +P + + F +GD LTLL ++ ++ +
Sbjct: 997 CSEEMLTIVSMLSVQNVFYRPKDKQALADQK--KAKFHQTEGDHLTLLAVYNSWKNNKFS 1054
Query: 763 KQFCHKYFFNYKVLKRAAELKNQMILLLKKSSIPLVTSPRNTNAVLKCLTNGFFSNAAYL 822
+C++ F + L+RA +++ QM+ ++ + + +V+ ++T V K + +GFF NAA
Sbjct: 1055 NPWCYENFIQARSLRRAQDIRKQMLGIMDRHKLDVVSCGKSTVRVQKAICSGFFRNAAKK 1114
Query: 823 HYSGVYRTVRGNEDLYIHPSSVLYTLQQPQ 852
YRT+ + +YIHPSS L+ +QP+
Sbjct: 1115 DPQEGYRTLIDQQVVYIHPSSALFN-RQPE 1143
Score = 216 (81.1 bits), Expect = 3.4e-37, Sum P(3) = 3.4e-37
Identities = 47/100 (47%), Positives = 66/100 (66%)
Query: 43 KFSRLYTEASF-SQLNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRVA 101
K RLYTE ++ ++ PE+QRT L+S VL LKA+GI+++L F F PP + L A
Sbjct: 894 KCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPMETLITA 953
Query: 102 LELLYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLLSS 141
+E LY+LGA+D G LT+ +G MAE PL P+ K+L+ S
Sbjct: 954 MEQLYTLGALDDEGLLTR-LGRRMAEFPLEPMLCKMLIMS 992
Score = 106 (42.4 bits), Expect = 2.8e-54, Sum P(3) = 2.8e-54
Identities = 20/43 (46%), Positives = 30/43 (69%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILMECSRK 43
MT+G+L+ DP + +Y++IMLD+ HERTI TD+L +K
Sbjct: 657 MTDGMLLRECLIDPDLTQYAIIMLDEAHERTIHTDVLFGLLKK 699
Score = 45 (20.9 bits), Expect = 1.8e-12, Sum P(3) = 1.8e-12
Identities = 7/19 (36%), Positives = 15/19 (78%)
Query: 434 IIGILKQYHNQREDLKLLI 452
+ G+LK+ +R+D+KL++
Sbjct: 693 LFGLLKKTVQKRQDMKLIV 711
Score = 43 (20.2 bits), Expect = 2.6e-19, Sum P(3) = 2.6e-19
Identities = 10/27 (37%), Positives = 16/27 (59%)
Query: 137 VLLSSGSVLDSAVEILLHRLRGLCDNV 163
V L+ +D+A EIL R++ L +V
Sbjct: 774 VFLTGQEEIDTACEILYERMKSLGPDV 800
Score = 37 (18.1 bits), Expect = 4.5e-47, Sum P(3) = 4.5e-47
Identities = 9/29 (31%), Positives = 12/29 (41%)
Query: 226 PDMPYQLRYIGQPEMGVGDKARPTIVRSS 254
PD P L + PE+ R + R S
Sbjct: 363 PDRPTHLSLVSAPEVEDDSLERKRLTRIS 391
>UNIPROTKB|Q14562 [details] [associations]
symbol:DHX8 "ATP-dependent RNA helicase DHX8" species:9606
"Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=TAS] [GO:0005681 "spliceosomal complex" evidence=TAS]
[GO:0008380 "RNA splicing" evidence=TAS] [GO:0006396 "RNA
processing" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003029 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00575
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 EMBL:D50487 GO:GO:0005524 GO:GO:0003723
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0000398
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316
HOVERGEN:HBG039428 KO:K12818 OMA:NAWCYEN IPI:IPI00031508 PIR:A56236
RefSeq:NP_004932.1 UniGene:Hs.463105 PDB:2EQS PDB:3I4U PDBsum:2EQS
PDBsum:3I4U ProteinModelPortal:Q14562 SMR:Q14562 IntAct:Q14562
STRING:Q14562 PhosphoSite:Q14562 DMDM:3023637 PaxDb:Q14562
PeptideAtlas:Q14562 PRIDE:Q14562 Ensembl:ENST00000262415
GeneID:1659 KEGG:hsa:1659 UCSC:uc002idu.1 CTD:1659
GeneCards:GC17P041572 HGNC:HGNC:2749 HPA:HPA049285 MIM:600396
neXtProt:NX_Q14562 PharmGKB:PA27231 InParanoid:Q14562
OrthoDB:EOG4D26P2 PhylomeDB:Q14562 EvolutionaryTrace:Q14562
GenomeRNAi:1659 NextBio:6828 ArrayExpress:Q14562 Bgee:Q14562
CleanEx:HS_DHX8 Genevestigator:Q14562 GermOnline:ENSG00000067596
Uniprot:Q14562
Length = 1220
Score = 371 (135.7 bits), Expect = 2.9e-54, Sum P(3) = 2.9e-54
Identities = 84/222 (37%), Positives = 129/222 (58%)
Query: 347 KRTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYYSNDPVVNYVQGVV 406
KR +KLI++SAT+DA + Q++ A I ++ G YPV + Y+ +P +Y+ +
Sbjct: 707 KRQDMKLIVTSATLDAVKFSQYFY-----EAPIFTIPGRTYPVEILYTKEPETDYLDASL 761
Query: 407 DTAIKIHESMPVGDILAFVIGLEQIEHIIGIL-KQYHNQREDL-KLLILPMHGSLPNNEQ 464
T ++IH + P GDIL F+ G E+I+ IL ++ + D+ +L+ILP++ +LP+ Q
Sbjct: 762 ITVMQIHLTEPPGDILVFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQ 821
Query: 465 IKVFRPTPRAMRKIVIATNIAETSITIPGIVYVIDPGFVKARWFNPNTLTNSLVVVPISK 524
++F P P RK+VIATNIAETS+TI GI YV+DPGFVK + +N T + LVV PIS+
Sbjct: 822 TRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQ 881
Query: 525 XXXXXXXXXXXXXXXXHVYRKNFMYN-RLFIHFCVSRNIPTI 565
YR +Y R + ++ N+P I
Sbjct: 882 AQAKQRAGRAGRTGPGKCYR---LYTERAYRDEMLTTNVPEI 920
Score = 321 (118.1 bits), Expect = 1.7e-41, Sum P(3) = 1.7e-41
Identities = 66/116 (56%), Positives = 86/116 (74%)
Query: 587 QYLLEAGWCYDTKLIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTK 646
QYL EAG+ K IG T+PRR++ S+A RVSEE LG VGYTIRF+DCT+ + T
Sbjct: 600 QYLAEAGYTSRGK-IGCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPE-TV 657
Query: 647 IKYMTEGILMREMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKILKDKERDFE 702
IKYMT+G+L+RE + DP L +Y++IMLDE HERTI TD+L GLLKK ++ K +D +
Sbjct: 658 IKYMTDGMLLRECLIDPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQ-KRQDMK 712
Score = 222 (83.2 bits), Expect = 2.9e-54, Sum P(3) = 2.9e-54
Identities = 46/150 (30%), Positives = 87/150 (58%)
Query: 703 CSDEIASILSLLQVQDIFIKPSSGALSLKARVLRRNFEVEQGDLLTLLNIFKFYEKQENK 762
CS+E+ +I+S+L VQ++F +P + + F +GD LTLL ++ ++ +
Sbjct: 1001 CSEEMLTIVSMLSVQNVFYRPKDKQALADQK--KAKFHQTEGDHLTLLAVYNSWKNNKFS 1058
Query: 763 KQFCHKYFFNYKVLKRAAELKNQMILLLKKSSIPLVTSPRNTNAVLKCLTNGFFSNAAYL 822
+C++ F + L+RA +++ QM+ ++ + + +V+ ++T V K + +GFF NAA
Sbjct: 1059 NPWCYENFIQARSLRRAQDIRKQMLGIMDRHKLDVVSCGKSTVRVQKAICSGFFRNAAKK 1118
Query: 823 HYSGVYRTVRGNEDLYIHPSSVLYTLQQPQ 852
YRT+ + +YIHPSS L+ +QP+
Sbjct: 1119 DPQEGYRTLIDQQVVYIHPSSALFN-RQPE 1147
Score = 216 (81.1 bits), Expect = 3.4e-37, Sum P(3) = 3.4e-37
Identities = 47/100 (47%), Positives = 66/100 (66%)
Query: 43 KFSRLYTEASF-SQLNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRVA 101
K RLYTE ++ ++ PE+QRT L+S VL LKA+GI+++L F F PP + L A
Sbjct: 898 KCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPMETLITA 957
Query: 102 LELLYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLLSS 141
+E LY+LGA+D G LT+ +G MAE PL P+ K+L+ S
Sbjct: 958 MEQLYTLGALDDEGLLTR-LGRRMAEFPLEPMLCKMLIMS 996
Score = 106 (42.4 bits), Expect = 2.9e-54, Sum P(3) = 2.9e-54
Identities = 20/43 (46%), Positives = 30/43 (69%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILMECSRK 43
MT+G+L+ DP + +Y++IMLD+ HERTI TD+L +K
Sbjct: 661 MTDGMLLRECLIDPDLTQYAIIMLDEAHERTIHTDVLFGLLKK 703
Score = 45 (20.9 bits), Expect = 1.8e-12, Sum P(3) = 1.8e-12
Identities = 7/19 (36%), Positives = 15/19 (78%)
Query: 434 IIGILKQYHNQREDLKLLI 452
+ G+LK+ +R+D+KL++
Sbjct: 697 LFGLLKKTVQKRQDMKLIV 715
Score = 43 (20.2 bits), Expect = 2.7e-19, Sum P(3) = 2.7e-19
Identities = 10/27 (37%), Positives = 16/27 (59%)
Query: 137 VLLSSGSVLDSAVEILLHRLRGLCDNV 163
V L+ +D+A EIL R++ L +V
Sbjct: 778 VFLTGQEEIDTACEILYERMKSLGPDV 804
Score = 37 (18.1 bits), Expect = 4.6e-47, Sum P(3) = 4.6e-47
Identities = 9/29 (31%), Positives = 12/29 (41%)
Query: 226 PDMPYQLRYIGQPEMGVGDKARPTIVRSS 254
PD P L + PE+ R + R S
Sbjct: 367 PDRPTHLSLVSAPEVEDDSLERKRLTRIS 395
>UNIPROTKB|F1MEM4 [details] [associations]
symbol:DHX8 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
InterPro:IPR022967 SMART:SM00316 GeneTree:ENSGT00700000104241
OMA:NAWCYEN EMBL:DAAA02049231 EMBL:DAAA02049230 IPI:IPI00695401
Ensembl:ENSBTAT00000010976 Uniprot:F1MEM4
Length = 1230
Score = 371 (135.7 bits), Expect = 3.0e-54, Sum P(3) = 3.0e-54
Identities = 84/222 (37%), Positives = 129/222 (58%)
Query: 347 KRTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYYSNDPVVNYVQGVV 406
KR +KLI++SAT+DA + Q++ A I ++ G YPV + Y+ +P +Y+ +
Sbjct: 717 KRQDMKLIVTSATLDAVKFSQYFY-----EAPIFTIPGRTYPVEILYTKEPETDYLDASL 771
Query: 407 DTAIKIHESMPVGDILAFVIGLEQIEHIIGIL-KQYHNQREDL-KLLILPMHGSLPNNEQ 464
T ++IH + P GDIL F+ G E+I+ IL ++ + D+ +L+ILP++ +LP+ Q
Sbjct: 772 ITVMQIHLTEPPGDILVFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQ 831
Query: 465 IKVFRPTPRAMRKIVIATNIAETSITIPGIVYVIDPGFVKARWFNPNTLTNSLVVVPISK 524
++F P P RK+VIATNIAETS+TI GI YV+DPGFVK + +N T + LVV PIS+
Sbjct: 832 TRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQ 891
Query: 525 XXXXXXXXXXXXXXXXHVYRKNFMYN-RLFIHFCVSRNIPTI 565
YR +Y R + ++ N+P I
Sbjct: 892 AQAKQRAGRAGRTGPGKCYR---LYTERAYRDEMLTTNVPEI 930
Score = 321 (118.1 bits), Expect = 1.7e-41, Sum P(3) = 1.7e-41
Identities = 66/116 (56%), Positives = 86/116 (74%)
Query: 587 QYLLEAGWCYDTKLIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTK 646
QYL EAG+ K IG T+PRR++ S+A RVSEE LG VGYTIRF+DCT+ + T
Sbjct: 610 QYLAEAGYTSRGK-IGCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPE-TV 667
Query: 647 IKYMTEGILMREMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKILKDKERDFE 702
IKYMT+G+L+RE + DP L +Y++IMLDE HERTI TD+L GLLKK ++ K +D +
Sbjct: 668 IKYMTDGMLLRECLIDPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQ-KRQDMK 722
Score = 222 (83.2 bits), Expect = 3.0e-54, Sum P(3) = 3.0e-54
Identities = 46/150 (30%), Positives = 87/150 (58%)
Query: 703 CSDEIASILSLLQVQDIFIKPSSGALSLKARVLRRNFEVEQGDLLTLLNIFKFYEKQENK 762
CS+E+ +I+S+L VQ++F +P + + F +GD LTLL ++ ++ +
Sbjct: 1011 CSEEMLTIVSMLSVQNVFYRPKDKQALADQK--KAKFHQTEGDHLTLLAVYNSWKNNKFS 1068
Query: 763 KQFCHKYFFNYKVLKRAAELKNQMILLLKKSSIPLVTSPRNTNAVLKCLTNGFFSNAAYL 822
+C++ F + L+RA +++ QM+ ++ + + +V+ ++T V K + +GFF NAA
Sbjct: 1069 NPWCYENFIQARSLRRAQDIRKQMLGIMDRHKLDVVSCGKSTVRVQKAICSGFFRNAAKK 1128
Query: 823 HYSGVYRTVRGNEDLYIHPSSVLYTLQQPQ 852
YRT+ + +YIHPSS L+ +QP+
Sbjct: 1129 DPQEGYRTLIDQQVVYIHPSSALFN-RQPE 1157
Score = 216 (81.1 bits), Expect = 3.5e-37, Sum P(3) = 3.5e-37
Identities = 47/100 (47%), Positives = 66/100 (66%)
Query: 43 KFSRLYTEASF-SQLNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRVA 101
K RLYTE ++ ++ PE+QRT L+S VL LKA+GI+++L F F PP + L A
Sbjct: 908 KCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPMETLITA 967
Query: 102 LELLYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLLSS 141
+E LY+LGA+D G LT+ +G MAE PL P+ K+L+ S
Sbjct: 968 MEQLYTLGALDDEGLLTR-LGRRMAEFPLEPMLCKMLIMS 1006
Score = 106 (42.4 bits), Expect = 3.0e-54, Sum P(3) = 3.0e-54
Identities = 20/43 (46%), Positives = 30/43 (69%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILMECSRK 43
MT+G+L+ DP + +Y++IMLD+ HERTI TD+L +K
Sbjct: 671 MTDGMLLRECLIDPDLTQYAIIMLDEAHERTIHTDVLFGLLKK 713
Score = 45 (20.9 bits), Expect = 1.9e-12, Sum P(3) = 1.9e-12
Identities = 7/19 (36%), Positives = 15/19 (78%)
Query: 434 IIGILKQYHNQREDLKLLI 452
+ G+LK+ +R+D+KL++
Sbjct: 707 LFGLLKKTVQKRQDMKLIV 725
Score = 43 (20.2 bits), Expect = 2.7e-19, Sum P(3) = 2.7e-19
Identities = 10/27 (37%), Positives = 16/27 (59%)
Query: 137 VLLSSGSVLDSAVEILLHRLRGLCDNV 163
V L+ +D+A EIL R++ L +V
Sbjct: 788 VFLTGQEEIDTACEILYERMKSLGPDV 814
Score = 37 (18.1 bits), Expect = 4.8e-47, Sum P(3) = 4.8e-47
Identities = 9/29 (31%), Positives = 12/29 (41%)
Query: 226 PDMPYQLRYIGQPEMGVGDKARPTIVRSS 254
PD P L + PE+ R + R S
Sbjct: 377 PDRPTHLSLVSAPEVEDDSLERKRLTRIS 405
>UNIPROTKB|D4A805 [details] [associations]
symbol:Dhx8 "Protein Dhx8" species:10116 "Rattus
norvegicus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1310723 GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 EMBL:CH473948 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR022967 SMART:SM00316
OMA:NAWCYEN IPI:IPI00567810 UniGene:Rn.108087
Ensembl:ENSRNOT00000028198 Uniprot:D4A805
Length = 1242
Score = 371 (135.7 bits), Expect = 3.1e-54, Sum P(3) = 3.1e-54
Identities = 84/222 (37%), Positives = 129/222 (58%)
Query: 347 KRTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYYSNDPVVNYVQGVV 406
KR +KLI++SAT+DA + Q++ A I ++ G YPV + Y+ +P +Y+ +
Sbjct: 729 KRQDMKLIVTSATLDAVKFSQYFY-----EAPIFTIPGRTYPVEILYTKEPETDYLDASL 783
Query: 407 DTAIKIHESMPVGDILAFVIGLEQIEHIIGIL-KQYHNQREDL-KLLILPMHGSLPNNEQ 464
T ++IH + P GDIL F+ G E+I+ IL ++ + D+ +L+ILP++ +LP+ Q
Sbjct: 784 ITVMQIHLTEPPGDILVFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQ 843
Query: 465 IKVFRPTPRAMRKIVIATNIAETSITIPGIVYVIDPGFVKARWFNPNTLTNSLVVVPISK 524
++F P P RK+VIATNIAETS+TI GI YV+DPGFVK + +N T + LVV PIS+
Sbjct: 844 TRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQ 903
Query: 525 XXXXXXXXXXXXXXXXHVYRKNFMYN-RLFIHFCVSRNIPTI 565
YR +Y R + ++ N+P I
Sbjct: 904 AQAKQRAGRAGRTGPGKCYR---LYTERAYRDEMLTTNVPEI 942
Score = 321 (118.1 bits), Expect = 1.8e-41, Sum P(3) = 1.8e-41
Identities = 66/116 (56%), Positives = 86/116 (74%)
Query: 587 QYLLEAGWCYDTKLIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTK 646
QYL EAG+ K IG T+PRR++ S+A RVSEE LG VGYTIRF+DCT+ + T
Sbjct: 622 QYLAEAGYTSRGK-IGCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPE-TV 679
Query: 647 IKYMTEGILMREMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKILKDKERDFE 702
IKYMT+G+L+RE + DP L +Y++IMLDE HERTI TD+L GLLKK ++ K +D +
Sbjct: 680 IKYMTDGMLLRECLIDPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQ-KRQDMK 734
Score = 222 (83.2 bits), Expect = 3.1e-54, Sum P(3) = 3.1e-54
Identities = 46/150 (30%), Positives = 87/150 (58%)
Query: 703 CSDEIASILSLLQVQDIFIKPSSGALSLKARVLRRNFEVEQGDLLTLLNIFKFYEKQENK 762
CS+E+ +I+S+L VQ++F +P + + F +GD LTLL ++ ++ +
Sbjct: 1023 CSEEMLTIVSMLSVQNVFYRPKDKQALADQK--KAKFHQTEGDHLTLLAVYNSWKNNKFS 1080
Query: 763 KQFCHKYFFNYKVLKRAAELKNQMILLLKKSSIPLVTSPRNTNAVLKCLTNGFFSNAAYL 822
+C++ F + L+RA +++ QM+ ++ + + +V+ ++T V K + +GFF NAA
Sbjct: 1081 NPWCYENFIQARSLRRAQDIRKQMLGIMDRHKLDVVSCGKSTVRVQKAICSGFFRNAAKK 1140
Query: 823 HYSGVYRTVRGNEDLYIHPSSVLYTLQQPQ 852
YRT+ + +YIHPSS L+ +QP+
Sbjct: 1141 DPQEGYRTLIDQQVVYIHPSSALFN-RQPE 1169
Score = 216 (81.1 bits), Expect = 3.7e-37, Sum P(3) = 3.7e-37
Identities = 47/100 (47%), Positives = 66/100 (66%)
Query: 43 KFSRLYTEASF-SQLNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRVA 101
K RLYTE ++ ++ PE+QRT L+S VL LKA+GI+++L F F PP + L A
Sbjct: 920 KCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPMETLITA 979
Query: 102 LELLYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLLSS 141
+E LY+LGA+D G LT+ +G MAE PL P+ K+L+ S
Sbjct: 980 MEQLYTLGALDDEGLLTR-LGRRMAEFPLEPMLCKMLIMS 1018
Score = 106 (42.4 bits), Expect = 3.1e-54, Sum P(3) = 3.1e-54
Identities = 20/43 (46%), Positives = 30/43 (69%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILMECSRK 43
MT+G+L+ DP + +Y++IMLD+ HERTI TD+L +K
Sbjct: 683 MTDGMLLRECLIDPDLTQYAIIMLDEAHERTIHTDVLFGLLKK 725
Score = 45 (20.9 bits), Expect = 2.0e-12, Sum P(3) = 2.0e-12
Identities = 7/19 (36%), Positives = 15/19 (78%)
Query: 434 IIGILKQYHNQREDLKLLI 452
+ G+LK+ +R+D+KL++
Sbjct: 719 LFGLLKKTVQKRQDMKLIV 737
Score = 43 (20.2 bits), Expect = 2.8e-19, Sum P(3) = 2.8e-19
Identities = 10/27 (37%), Positives = 16/27 (59%)
Query: 137 VLLSSGSVLDSAVEILLHRLRGLCDNV 163
V L+ +D+A EIL R++ L +V
Sbjct: 800 VFLTGQEEIDTACEILYERMKSLGPDV 826
Score = 37 (18.1 bits), Expect = 5.0e-47, Sum P(3) = 5.0e-47
Identities = 9/29 (31%), Positives = 12/29 (41%)
Query: 226 PDMPYQLRYIGQPEMGVGDKARPTIVRSS 254
PD P L + PE+ R + R S
Sbjct: 389 PDRPTHLSLVSAPEVEDDSLERKRLTRIS 417
>MGI|MGI:1306823 [details] [associations]
symbol:Dhx8 "DEAH (Asp-Glu-Ala-His) box polypeptide 8"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005681 "spliceosomal
complex" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=ISO] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
MGI:MGI:1306823 GO:GO:0005524 GO:GO:0008380 GO:GO:0006397
GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:AL590994 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 InterPro:IPR022967 SMART:SM00316 HOVERGEN:HBG039428
GeneTree:ENSGT00700000104241 KO:K12818 OMA:NAWCYEN CTD:1659
OrthoDB:EOG4D26P2 EMBL:BC132445 EMBL:AL591436 IPI:IPI00461304
RefSeq:NP_659080.2 UniGene:Mm.28186 ProteinModelPortal:A2A4P0
SMR:A2A4P0 PaxDb:A2A4P0 PRIDE:A2A4P0 DNASU:217207
Ensembl:ENSMUST00000039152 GeneID:217207 KEGG:mmu:217207
UCSC:uc007lpr.1 InParanoid:A2A4P0 NextBio:375641 Bgee:A2A4P0
Genevestigator:A2A4P0 Uniprot:A2A4P0
Length = 1244
Score = 371 (135.7 bits), Expect = 3.2e-54, Sum P(3) = 3.2e-54
Identities = 84/222 (37%), Positives = 129/222 (58%)
Query: 347 KRTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYYSNDPVVNYVQGVV 406
KR +KLI++SAT+DA + Q++ A I ++ G YPV + Y+ +P +Y+ +
Sbjct: 731 KRQDMKLIVTSATLDAVKFSQYFY-----EAPIFTIPGRTYPVEILYTKEPETDYLDASL 785
Query: 407 DTAIKIHESMPVGDILAFVIGLEQIEHIIGIL-KQYHNQREDL-KLLILPMHGSLPNNEQ 464
T ++IH + P GDIL F+ G E+I+ IL ++ + D+ +L+ILP++ +LP+ Q
Sbjct: 786 ITVMQIHLTEPPGDILVFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQ 845
Query: 465 IKVFRPTPRAMRKIVIATNIAETSITIPGIVYVIDPGFVKARWFNPNTLTNSLVVVPISK 524
++F P P RK+VIATNIAETS+TI GI YV+DPGFVK + +N T + LVV PIS+
Sbjct: 846 TRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQ 905
Query: 525 XXXXXXXXXXXXXXXXHVYRKNFMYN-RLFIHFCVSRNIPTI 565
YR +Y R + ++ N+P I
Sbjct: 906 AQAKQRAGRAGRTGPGKCYR---LYTERAYRDEMLTTNVPEI 944
Score = 321 (118.1 bits), Expect = 1.8e-41, Sum P(3) = 1.8e-41
Identities = 66/116 (56%), Positives = 86/116 (74%)
Query: 587 QYLLEAGWCYDTKLIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTK 646
QYL EAG+ K IG T+PRR++ S+A RVSEE LG VGYTIRF+DCT+ + T
Sbjct: 624 QYLAEAGYTSRGK-IGCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPE-TV 681
Query: 647 IKYMTEGILMREMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKILKDKERDFE 702
IKYMT+G+L+RE + DP L +Y++IMLDE HERTI TD+L GLLKK ++ K +D +
Sbjct: 682 IKYMTDGMLLRECLIDPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQ-KRQDMK 736
Score = 222 (83.2 bits), Expect = 3.2e-54, Sum P(3) = 3.2e-54
Identities = 46/150 (30%), Positives = 87/150 (58%)
Query: 703 CSDEIASILSLLQVQDIFIKPSSGALSLKARVLRRNFEVEQGDLLTLLNIFKFYEKQENK 762
CS+E+ +I+S+L VQ++F +P + + F +GD LTLL ++ ++ +
Sbjct: 1025 CSEEMLTIVSMLSVQNVFYRPKDKQALADQK--KAKFHQTEGDHLTLLAVYNSWKNNKFS 1082
Query: 763 KQFCHKYFFNYKVLKRAAELKNQMILLLKKSSIPLVTSPRNTNAVLKCLTNGFFSNAAYL 822
+C++ F + L+RA +++ QM+ ++ + + +V+ ++T V K + +GFF NAA
Sbjct: 1083 NPWCYENFIQARSLRRAQDIRKQMLGIMDRHKLDVVSCGKSTVRVQKAICSGFFRNAAKK 1142
Query: 823 HYSGVYRTVRGNEDLYIHPSSVLYTLQQPQ 852
YRT+ + +YIHPSS L+ +QP+
Sbjct: 1143 DPQEGYRTLIDQQVVYIHPSSALFN-RQPE 1171
Score = 216 (81.1 bits), Expect = 3.7e-37, Sum P(3) = 3.7e-37
Identities = 47/100 (47%), Positives = 66/100 (66%)
Query: 43 KFSRLYTEASF-SQLNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRVA 101
K RLYTE ++ ++ PE+QRT L+S VL LKA+GI+++L F F PP + L A
Sbjct: 922 KCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPMETLITA 981
Query: 102 LELLYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLLSS 141
+E LY+LGA+D G LT+ +G MAE PL P+ K+L+ S
Sbjct: 982 MEQLYTLGALDDEGLLTR-LGRRMAEFPLEPMLCKMLIMS 1020
Score = 106 (42.4 bits), Expect = 3.2e-54, Sum P(3) = 3.2e-54
Identities = 20/43 (46%), Positives = 30/43 (69%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILMECSRK 43
MT+G+L+ DP + +Y++IMLD+ HERTI TD+L +K
Sbjct: 685 MTDGMLLRECLIDPDLTQYAIIMLDEAHERTIHTDVLFGLLKK 727
Score = 45 (20.9 bits), Expect = 2.0e-12, Sum P(3) = 2.0e-12
Identities = 7/19 (36%), Positives = 15/19 (78%)
Query: 434 IIGILKQYHNQREDLKLLI 452
+ G+LK+ +R+D+KL++
Sbjct: 721 LFGLLKKTVQKRQDMKLIV 739
Score = 43 (20.2 bits), Expect = 2.9e-19, Sum P(3) = 2.9e-19
Identities = 10/27 (37%), Positives = 16/27 (59%)
Query: 137 VLLSSGSVLDSAVEILLHRLRGLCDNV 163
V L+ +D+A EIL R++ L +V
Sbjct: 802 VFLTGQEEIDTACEILYERMKSLGPDV 828
Score = 37 (18.1 bits), Expect = 5.1e-47, Sum P(3) = 5.1e-47
Identities = 9/29 (31%), Positives = 12/29 (41%)
Query: 226 PDMPYQLRYIGQPEMGVGDKARPTIVRSS 254
PD P L + PE+ R + R S
Sbjct: 391 PDRPTHLSLVSAPEVEDDSLERKRLTRIS 419
>UNIPROTKB|F1P306 [details] [associations]
symbol:LOC100858239 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 InterPro:IPR022967
SMART:SM00316 GeneTree:ENSGT00700000104241 EMBL:AADN02070153
EMBL:AADN02070154 IPI:IPI00591627 Ensembl:ENSGALT00000001801
OMA:AMANTAM Uniprot:F1P306
Length = 1168
Score = 371 (135.7 bits), Expect = 4.7e-54, Sum P(3) = 4.7e-54
Identities = 84/222 (37%), Positives = 129/222 (58%)
Query: 347 KRTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYYSNDPVVNYVQGVV 406
KR +KLI++SAT+DA + Q++ A I ++ G YPV + Y+ +P +Y+ +
Sbjct: 655 KRQDMKLIVTSATLDAVKFSQYFY-----EAPIFTIPGRTYPVEILYTKEPETDYLDASL 709
Query: 407 DTAIKIHESMPVGDILAFVIGLEQIEHIIGIL-KQYHNQREDL-KLLILPMHGSLPNNEQ 464
T ++IH + P GDIL F+ G E+I+ IL ++ + D+ +L+ILP++ +LP+ Q
Sbjct: 710 ITVMQIHLTEPPGDILVFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQ 769
Query: 465 IKVFRPTPRAMRKIVIATNIAETSITIPGIVYVIDPGFVKARWFNPNTLTNSLVVVPISK 524
++F P P RK+VIATNIAETS+TI GI YV+DPGFVK + +N T + LVV PIS+
Sbjct: 770 TRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQ 829
Query: 525 XXXXXXXXXXXXXXXXHVYRKNFMYN-RLFIHFCVSRNIPTI 565
YR +Y R + ++ N+P I
Sbjct: 830 AQAKQRAGRAGRTGPGKCYR---LYTERAYRDEMLTTNVPEI 868
Score = 321 (118.1 bits), Expect = 2.0e-42, Sum P(3) = 2.0e-42
Identities = 66/116 (56%), Positives = 86/116 (74%)
Query: 587 QYLLEAGWCYDTKLIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTK 646
QYL EAG+ K IG T+PRR++ S+A RVSEE LG VGYTIRF+DCT+ + T
Sbjct: 548 QYLAEAGYTSRGK-IGCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPE-TV 605
Query: 647 IKYMTEGILMREMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKILKDKERDFE 702
IKYMT+G+L+RE + DP L +Y++IMLDE HERTI TD+L GLLKK ++ K +D +
Sbjct: 606 IKYMTDGMLLRECLIDPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQ-KRQDMK 660
Score = 219 (82.2 bits), Expect = 4.7e-54, Sum P(3) = 4.7e-54
Identities = 46/150 (30%), Positives = 86/150 (57%)
Query: 703 CSDEIASILSLLQVQDIFIKPSSGALSLKARVLRRNFEVEQGDLLTLLNIFKFYEKQENK 762
CS+E+ +I+S+L VQ++F +P + + F +GD LTLL ++ ++ +
Sbjct: 949 CSEEMLTIVSMLSVQNVFYRPKDKQALADQK--KAKFHQTEGDHLTLLAVYNSWKNNKFS 1006
Query: 763 KQFCHKYFFNYKVLKRAAELKNQMILLLKKSSIPLVTSPRNTNAVLKCLTNGFFSNAAYL 822
+C++ F + L+RA +++ QM+ ++ + + +V+ + T V K + +GFF NAA
Sbjct: 1007 NPWCYENFIQARSLRRAQDIRKQMLGIMDRHKLDVVSCGKATVRVQKAICSGFFRNAAKK 1066
Query: 823 HYSGVYRTVRGNEDLYIHPSSVLYTLQQPQ 852
YRT+ + +YIHPSS L+ +QP+
Sbjct: 1067 DPQEGYRTLIDQQVVYIHPSSALFN-RQPE 1095
Score = 216 (81.1 bits), Expect = 6.1e-37, Sum P(3) = 6.1e-37
Identities = 47/100 (47%), Positives = 66/100 (66%)
Query: 43 KFSRLYTEASF-SQLNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRVA 101
K RLYTE ++ ++ PE+QRT L+S VL LKA+GI+++L F F PP + L A
Sbjct: 846 KCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPMETLITA 905
Query: 102 LELLYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLLSS 141
+E LY+LGA+D G LT+ +G MAE PL P+ K+L+ S
Sbjct: 906 MEQLYTLGALDDEGLLTR-LGRRMAEFPLEPMLCKMLIMS 944
Score = 106 (42.4 bits), Expect = 4.7e-54, Sum P(3) = 4.7e-54
Identities = 20/43 (46%), Positives = 30/43 (69%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILMECSRK 43
MT+G+L+ DP + +Y++IMLD+ HERTI TD+L +K
Sbjct: 609 MTDGMLLRECLIDPDLTQYAIIMLDEAHERTIHTDVLFGLLKK 651
Score = 48 (22.0 bits), Expect = 5.4e-48, Sum P(3) = 5.4e-48
Identities = 23/74 (31%), Positives = 34/74 (45%)
Query: 112 DVNGNLTKP-VGETMAEM----PLHPIHAKVLLSSGSVLDSAVEILLHRLRGLCDNVDSG 166
D+N N + VGET E P P H L+++ V D +E RL + D
Sbjct: 325 DLNPNRRRNLVGETNEETSMRNPDRPSHLS-LVNAPEVEDDTLE--RKRLTRISD----- 376
Query: 167 PETFHDHEMCFSIR 180
PE + ++CF +R
Sbjct: 377 PEKWEIKQVCFVLR 390
Score = 45 (20.9 bits), Expect = 2.5e-13, Sum P(3) = 2.5e-13
Identities = 7/19 (36%), Positives = 15/19 (78%)
Query: 434 IIGILKQYHNQREDLKLLI 452
+ G+LK+ +R+D+KL++
Sbjct: 645 LFGLLKKTVQKRQDMKLIV 663
Score = 43 (20.2 bits), Expect = 4.7e-19, Sum P(3) = 4.7e-19
Identities = 10/27 (37%), Positives = 16/27 (59%)
Query: 137 VLLSSGSVLDSAVEILLHRLRGLCDNV 163
V L+ +D+A EIL R++ L +V
Sbjct: 726 VFLTGQEEIDTACEILYERMKSLGPDV 752
Score = 41 (19.5 bits), Expect = 2.9e-47, Sum P(3) = 2.9e-47
Identities = 14/50 (28%), Positives = 19/50 (38%)
Query: 226 PDMPYQLRYIGQPEMGVGDKARPTIVRSSIDVACSCTVVEF-LTEMGCRM 274
PD P L + PE+ R + R S V F L +GC +
Sbjct: 347 PDRPSHLSLVNAPEVEDDTLERKRLTRISDPEKWEIKQVCFVLRRIGCHL 396
>UNIPROTKB|E1BYA5 [details] [associations]
symbol:DHX33 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000182 "rDNA binding"
evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0033613 "activating transcription
factor binding" evidence=IEA] [GO:0045943 "positive regulation of
transcription from RNA polymerase I promoter" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0005654 GO:GO:0005730 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GO:GO:0000182 GO:GO:0045943
GeneTree:ENSGT00700000104241 OMA:APDYFRR EMBL:AADN02025994
IPI:IPI00823199 Ensembl:ENSGALT00000002492 ArrayExpress:E1BYA5
Uniprot:E1BYA5
Length = 660
Score = 339 (124.4 bits), Expect = 9.0e-54, Sum P(3) = 9.0e-54
Identities = 71/198 (35%), Positives = 120/198 (60%)
Query: 330 DVIGEDMKAFAEQLKPLKRTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPV 389
DV+ +KA ++ K L + LK+I+ SAT+D ++ Q++N A +L ++G +P+
Sbjct: 154 DVLFGVVKAAQKKRKELGKLPLKVIVMSATMDVDQFSQYFN-----GAPVLYLEGRQHPI 208
Query: 390 SVYYSNDPVVNYVQGVVDTAIKIHESMPVG-DILAFVIGLEQIEHIIGILKQYHNQRED- 447
V+Y+ P +Y+Q + + +IH+ P DIL F+ G E+IE + + D
Sbjct: 209 QVFYTKQPQSDYLQAALVSVFQIHQEAPSSQDILVFLTGQEEIEAMTKTCRDIAKHLPDG 268
Query: 448 -LKLLILPMHGSLPNNEQIKVFRPTPRAMRKIVIATNIAETSITIPGIVYVIDPGFVKAR 506
++ ++P++ SLP ++Q++VF+ P+ RK++++TNIAETSITI GI YV+D G VKA+
Sbjct: 269 CPQMTVMPLYASLPYSQQLRVFQAAPKGCRKVILSTNIAETSITISGIKYVVDTGMVKAK 328
Query: 507 WFNPNTLTNSLVVVPISK 524
+NP L V +SK
Sbjct: 329 KYNPEIGLEVLAVQRVSK 346
Score = 316 (116.3 bits), Expect = 4.1e-24, Sum P(2) = 4.1e-24
Identities = 73/179 (40%), Positives = 115/179 (64%)
Query: 587 QYLLEAGWCYDTKLIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTK 646
QYL EAG +I +T+PRR++ SLA RVS+E RT LG VGYT+RFDD T+++ T+
Sbjct: 59 QYLYEAG-IGRQGIIAVTQPRRVAAISLATRVSDEKRTELGKLVGYTVRFDDLTSDE-TR 116
Query: 647 IKYMTEGILMREMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKILKDKERDFECSDE 706
IK++T+G+L+RE + DP+LRKYSV++LDE HERTI TD+L G++K K ++ + +
Sbjct: 117 IKFLTDGMLLREAIGDPILRKYSVVILDEAHERTIHTDVLFGVVKAAQKKRKELGKLPLK 176
Query: 707 IASILSLLQVQDIFIKPSSGALSLKARVLRRNFEV-----EQGDLL--TLLNIFKFYEK 758
+ + + + V D F + +GA L + +V Q D L L+++F+ +++
Sbjct: 177 VIVMSATMDV-DQFSQYFNGAPVLYLEGRQHPIQVFYTKQPQSDYLQAALVSVFQIHQE 234
Score = 235 (87.8 bits), Expect = 9.0e-54, Sum P(3) = 9.0e-54
Identities = 50/158 (31%), Positives = 90/158 (56%)
Query: 701 FECSDEIASILSLLQVQDIFIKPSSGALSLKARVLRRNFEVEQGDLLTLLNIFKFYEKQE 760
F C++EI +I+SLL V + P + +++ +R+ F +GD LTLLN+++ ++
Sbjct: 469 FHCTEEILTIVSLLSVDSVLYNPPARRDEVQS--VRKKFISSEGDHLTLLNVYRAFKNVS 526
Query: 761 NKKQFCHKYFFNYKVLKRAAELKNQMILLLKKSSIPLVTSPRNTNAVLKCLTNGFFSNAA 820
K++C + F N + + ++++ Q+ + K S+P+ +S +T + +CL + F NAA
Sbjct: 527 GNKEWCKENFVNGRNMMLVSDVRAQLRDICVKLSMPMESSRSDTANIRRCLAHSLFMNAA 586
Query: 821 YLHYSGVYRTVRGNEDLYIHPSSVLYTLQQPQCTHLEG 858
L G Y TV ++ + IHPSSVL+ + P C G
Sbjct: 587 ELQPDGTYSTVNSHQLVAIHPSSVLFHCK-PSCVVYNG 623
Score = 164 (62.8 bits), Expect = 1.9e-34, Sum P(3) = 1.9e-34
Identities = 42/101 (41%), Positives = 58/101 (57%)
Query: 46 RLYTEASFSQLNECTPPEMQ---RTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRVAL 102
RLYTE F + ++ T PE+Q R L+S +LQL AL I NIL F F S P ++ A+
Sbjct: 366 RLYTEDEFEKFDKMTVPEIQSLCRCNLASVLLQLLALRIPNILTFDFMSKPSPDAIQAAI 425
Query: 103 ELLYSLGAMDVNGN--LTKPVGETMAEMPLHPIHAKVLLSS 141
E L LGA++ + + P+G MA PL P +K +L S
Sbjct: 426 EQLDLLGAVEQKEDQLVLTPLGRKMAAFPLEPKFSKTILLS 466
Score = 106 (42.4 bits), Expect = 9.0e-54, Sum P(3) = 9.0e-54
Identities = 19/37 (51%), Positives = 28/37 (75%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDIL 37
+T+G+L+ DP + KYSV++LD+ HERTI TD+L
Sbjct: 120 LTDGMLLREAIGDPILRKYSVVILDEAHERTIHTDVL 156
Score = 40 (19.1 bits), Expect = 7.0e-47, Sum P(3) = 7.0e-47
Identities = 8/22 (36%), Positives = 12/22 (54%)
Query: 90 PSPPPAQNLRVALELLYSLGAM 111
P PPPA + R L + + G +
Sbjct: 12 PPPPPAASQRRELPIFQARGPL 33
>POMBASE|SPBC19C2.01 [details] [associations]
symbol:cdc28 "ATP-dependent RNA helicase Cdc28"
species:4896 "Schizosaccharomyces pombe" [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=TAS] [GO:0005524 "ATP binding"
evidence=IC] [GO:0005681 "spliceosomal complex" evidence=IC]
[GO:0005682 "U5 snRNP" evidence=ISO] [GO:0045292 "mRNA cis
splicing, via spliceosome" evidence=IMP] [GO:0046540 "U4/U6 x U5
tri-snRNP complex" evidence=ISO] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 PomBase:SPBC19C2.01
GO:GO:0005524 EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0005681
GO:GO:0005682 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0046540 GO:GO:0004004 EMBL:U48733 PIR:T46568 PIR:T50372
RefSeq:NP_595686.2 ProteinModelPortal:Q10752 STRING:Q10752
EnsemblFungi:SPBC19C2.01.1 GeneID:2540707 KEGG:spo:SPBC19C2.01
HOGENOM:HOG000175261 KO:K12813 OMA:RIDDHRD OrthoDB:EOG4SBJ63
NextBio:20801829 GO:GO:0045292 Uniprot:Q10752
Length = 1055
Score = 370 (135.3 bits), Expect = 1.5e-53, Sum P(3) = 1.5e-53
Identities = 75/179 (41%), Positives = 113/179 (63%)
Query: 348 RTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYYSNDPVVNYVQGVVD 407
R LK++ISSAT+DAE+ +++ A + V G YPV +YY+ P NY+Q +
Sbjct: 562 RPDLKVLISSATIDAEKFSAYFD-----EAPVFYVPGRRYPVDIYYTPQPEANYIQAAIT 616
Query: 408 TAIKIHESMPVGDILAFVIGLEQIEHIIGILKQYHN--QREDLKLLILPMHGSLPNNEQI 465
T ++IH + P GDIL F+ G ++IE + +++ + ++++ P++ +LP+ Q
Sbjct: 617 TILQIHTTQPAGDILVFLTGQDEIELMSENMQELCRILGKRIPEIILCPIYANLPSELQA 676
Query: 466 KVFRPTPRAMRKIVIATNIAETSITIPGIVYVIDPGFVKARWFNPNTLTNSLVVVPISK 524
K+F PTP RK+V+ATNIAETSITI G+ +VID GFVK +NP T SLV VP S+
Sbjct: 677 KIFDPTPPGARKVVLATNIAETSITIDGVNFVIDSGFVKQNMYNPRTGMESLVSVPCSR 735
Score = 282 (104.3 bits), Expect = 1.0e-38, Sum P(2) = 1.0e-38
Identities = 56/109 (51%), Positives = 80/109 (73%)
Query: 587 QYLLEAGWCYDTKLIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTK 646
Q+L EAG+ K I T+PRR++ S+A RV++E+ LG VGY+IRF++ T+E T
Sbjct: 453 QFLHEAGYTKGNKKICCTQPRRVAAMSVAARVAKEMDVRLGQEVGYSIRFENATSEK-TV 511
Query: 647 IKYMTEGILMREMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKILK 695
IKY+T+G+L+RE +T+P L YSVI++DE HERT+ TDIL GL+K I +
Sbjct: 512 IKYLTDGMLLREFLTEPDLASYSVIIIDEAHERTLHTDILFGLVKDIAR 560
Score = 223 (83.6 bits), Expect = 1.5e-53, Sum P(3) = 1.5e-53
Identities = 57/158 (36%), Positives = 90/158 (56%)
Query: 689 LLKKILKDKERDFECSDEIASILSLL-QVQDIFIKPSSGALSLKARVLRRNFEVEQGDLL 747
+L K L + + C +E+ SI+S+L + +F +P + +A R NF GD L
Sbjct: 842 MLSKSLIASSK-YGCVEEVLSIVSMLGEASSLFYRPKDKIM--EADKARANFTQPGGDHL 898
Query: 748 TLLNIFKFYEKQENKKQFCHKYFFNYKVLKRAAELKNQMILLLKKSSIPLVT-SPRNTNA 806
TLL+I+ + + + + F YK L RA ++++Q+ L ++ I LVT S + +
Sbjct: 899 TLLHIWNEWVDTDFSYNWARENFLQYKSLCRARDVRDQLANLCERVEIELVTNSSESLDP 958
Query: 807 VLKCLTNGFFSNAAYLHYSG-VYRTVRGNEDLYIHPSS 843
+ K +T G+FSNAA L SG YRTV+ N+ +YIHPSS
Sbjct: 959 IKKAITAGYFSNAARLDRSGDSYRTVKSNQTVYIHPSS 996
Score = 220 (82.5 bits), Expect = 1.1e-17, Sum P(3) = 1.1e-17
Identities = 60/147 (40%), Positives = 87/147 (59%)
Query: 43 KFSRLYTEASFS-QLNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRVA 101
K RLYT +++ +L+ T PE+QRT L++ VL LK+LGI+N+L F F PP + L +
Sbjct: 752 KCFRLYTRRTYNNELDMVTSPEIQRTNLTNIVLLLKSLGINNLLDFDFMDAPPPETLMRS 811
Query: 102 LELLYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLLSSGSVLDSAVEIL-LHRLRGLC 160
LELLY+LGA++ G LTK +G MAE P P+ +K L++S S E+L + + G
Sbjct: 812 LELLYALGALNNRGELTK-LGRQMAEFPTDPMLSKSLIAS-SKYGCVEEVLSIVSMLGEA 869
Query: 161 DNVDSGPETFHDHEM-CFSIRGNQTQP 186
++ P+ D M R N TQP
Sbjct: 870 SSLFYRPK---DKIMEADKARANFTQP 893
Score = 96 (38.9 bits), Expect = 1.5e-53, Sum P(3) = 1.5e-53
Identities = 18/46 (39%), Positives = 30/46 (65%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILMECSRKFSR 46
+T+G+L+ +P + YSVI++D+ HERT+ TDIL + +R
Sbjct: 515 LTDGMLLREFLTEPDLASYSVIIIDEAHERTLHTDILFGLVKDIAR 560
Score = 38 (18.4 bits), Expect = 5.5e-13, Sum P(2) = 5.5e-13
Identities = 8/19 (42%), Positives = 12/19 (63%)
Query: 434 IIGILKQYHNQREDLKLLI 452
+ G++K R DLK+LI
Sbjct: 551 LFGLVKDIARFRPDLKVLI 569
Score = 37 (18.1 bits), Expect = 3.6e-34, Sum P(3) = 3.6e-34
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 717 QDIFIKPSSGALSLKARVL 735
Q ++I PSS K +V+
Sbjct: 988 QTVYIHPSSSVAEKKPKVI 1006
>UNIPROTKB|F1PRA1 [details] [associations]
symbol:DHX33 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045943 "positive regulation of transcription
from RNA polymerase I promoter" evidence=IEA] [GO:0033613
"activating transcription factor binding" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA]
[GO:0000182 "rDNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005654 GO:GO:0005730
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GO:GO:0000182 GO:GO:0045943
GeneTree:ENSGT00700000104241 OMA:APDYFRR EMBL:AAEX03003580
Ensembl:ENSCAFT00000024626 Uniprot:F1PRA1
Length = 616
Score = 345 (126.5 bits), Expect = 2.4e-53, Sum P(3) = 2.4e-53
Identities = 74/198 (37%), Positives = 120/198 (60%)
Query: 330 DVIGEDMKAFAEQLKPLKRTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPV 389
DV+ +KA + K L++ LK+I+ SAT+D + Q++N A++L ++G +P+
Sbjct: 113 DVLFGVVKAAQRRRKELRKLPLKVIVMSATMDVDLFSQYFN-----GASVLYLEGRQHPI 167
Query: 390 SVYYSNDPVVNYVQGVVDTAIKIHESMPVG-DILAFVIGLEQIEHIIGILKQYHNQRED- 447
V+Y+ P +Y+ + + +IH+ P DIL F+ G E+IE + + D
Sbjct: 168 QVFYTKQPQQDYLHAALVSVFQIHQEAPSSQDILVFLTGQEEIEAVSKTCRDIAKHLPDG 227
Query: 448 -LKLLILPMHGSLPNNEQIKVFRPTPRAMRKIVIATNIAETSITIPGIVYVIDPGFVKAR 506
+L+LP++ SLP +Q++VF+ P+ RK++IATNIAETSITI GI YV+D G VKA+
Sbjct: 228 CPSMLVLPLYASLPYAQQLRVFQGAPKGCRKVIIATNIAETSITITGIKYVVDTGMVKAK 287
Query: 507 WFNPNTLTNSLVVVPISK 524
+NP++ L V +SK
Sbjct: 288 KYNPDSGLEVLAVQRVSK 305
Score = 306 (112.8 bits), Expect = 3.7e-23, Sum P(2) = 3.7e-23
Identities = 67/149 (44%), Positives = 102/149 (68%)
Query: 587 QYLLEAGWCYDTKLIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTK 646
QYL E G +I +T+PRR++ SLA RVS+E RT LG VGYT+RFDD ++ED T+
Sbjct: 18 QYLYEGG-IGRQGVIAVTQPRRVAAISLATRVSDEKRTELGKLVGYTVRFDDVSSED-TR 75
Query: 647 IKYMTEGILMREMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKILKDKERDFECSDE 706
IK++T+G+L+RE ++D LLRKYS I+LDE HERT+ TD+L G++K + ++ + +
Sbjct: 76 IKFLTDGMLLREAISDSLLRKYSCIILDEAHERTVHTDVLFGVVKAAQRRRKELRKLPLK 135
Query: 707 IASILSLLQVQDIFIKPSSGA--LSLKAR 733
+ + + + V D+F + +GA L L+ R
Sbjct: 136 VIVMSATMDV-DLFSQYFNGASVLYLEGR 163
Score = 233 (87.1 bits), Expect = 2.4e-53, Sum P(3) = 2.4e-53
Identities = 50/153 (32%), Positives = 86/153 (56%)
Query: 701 FECSDEIASILSLLQVQDIFIKPSSGALSLKARVLRRNFEVEQGDLLTLLNIFKFYEKQE 760
F C++EI +I+SLL V + P S ++A +R+ F +GD +TLLNI++ ++
Sbjct: 425 FHCTEEILTIVSLLSVDSVLYNPPSRRDEVQA--MRKKFLSSEGDHITLLNIYRTFKSLG 482
Query: 761 NKKQFCHKYFFNYKVLKRAAELKNQMILLLKKSSIPLVTSPRNTNAVLKCLTNGFFSNAA 820
K +C + F N + + AAE++ Q+ + K S+P+V+ + ++ +CL + F +AA
Sbjct: 483 GDKDWCRENFVNSRNMMLAAEVRAQLRDICLKMSMPMVSCRGDVESIRRCLAHSLFMSAA 542
Query: 821 YLHYSGVYRTVRGNEDLYIHPSSVLYTLQQPQC 853
L G Y T + + IHPSS L+ + P C
Sbjct: 543 ELQPDGTYTTTDSRQPVAIHPSSALFHCR-PAC 574
Score = 181 (68.8 bits), Expect = 6.5e-35, Sum P(3) = 6.5e-35
Identities = 42/98 (42%), Positives = 58/98 (59%)
Query: 46 RLYTEASFSQLNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRVALELL 105
RLYTE F + + T PE+QR L+S +LQL A+ + N+L F F S P +++ A+ L
Sbjct: 325 RLYTENEFEKFEKMTVPEIQRCNLASVLLQLLAMKVPNVLTFDFMSKPSPDHMQAAVAQL 384
Query: 106 YSLGAMDVNGN-LT-KPVGETMAEMPLHPIHAKVLLSS 141
LGA++ N LT P+G MA PL P AK +L S
Sbjct: 385 DLLGALERKDNQLTLTPIGRKMAAFPLEPKFAKTILLS 422
Score = 94 (38.1 bits), Expect = 2.4e-53, Sum P(3) = 2.4e-53
Identities = 17/37 (45%), Positives = 26/37 (70%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDIL 37
+T+G+L+ D + KYS I+LD+ HERT+ TD+L
Sbjct: 79 LTDGMLLREAISDSLLRKYSCIILDEAHERTVHTDVL 115
Score = 40 (19.1 bits), Expect = 3.7e-23, Sum P(2) = 3.7e-23
Identities = 9/17 (52%), Positives = 11/17 (64%)
Query: 840 HPSSVLYTLQQPQCTHL 856
HP V YT +QPQ +L
Sbjct: 165 HPIQVFYT-KQPQQDYL 180
>UNIPROTKB|G4MKC3 [details] [associations]
symbol:MGG_02518 "ATP-dependent RNA helicase DHX8"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:CM001231 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
KO:K13117 RefSeq:XP_003709326.1 EnsemblFungi:MGG_02518T0
GeneID:2681615 KEGG:mgr:MGG_02518 Uniprot:G4MKC3
Length = 671
Score = 356 (130.4 bits), Expect = 3.4e-53, Sum P(3) = 3.4e-53
Identities = 75/191 (39%), Positives = 112/191 (58%)
Query: 347 KRTQLKLIISSATVDAEEICQFYNISASSN-----------ATILSVKGHLYPVSVYYSN 395
KR +L++IISSAT+ AE+ F++ + + TI+S++G YP+ + Y
Sbjct: 164 KRPELRIIISSATLQAEQFLAFFSSTLGGSRQDREEPQGTIGTIVSLEGRTYPIDILYLE 223
Query: 396 DPVVNYVQGVVDTAIKIHESMPVGDILAFVIGLEQIEHIIGILKQY--HNQREDLKLLIL 453
P +Y+Q V T + +HE+ P GDIL F+ G ++IE + + + H +D LL L
Sbjct: 224 SPAEDYLQRAVSTVLDVHENEPDGDILVFLTGRDEIEAAVDAVSERTAHLTSQDRGLLPL 283
Query: 454 PMHGSLPNNEQIKVFRPTPRAMRKIVIATNIAETSITIPGIVYVIDPGFVKARWFNPNTL 513
P+ L +Q+ +F P RK++ +TNIAE S+TI GIVYV+D GFVK R +NP T
Sbjct: 284 PLFSGLSTEQQMYIFEEAPANTRKVIFSTNIAEASVTISGIVYVVDSGFVKLRAYNPKTG 343
Query: 514 TNSLVVVPISK 524
+L VPISK
Sbjct: 344 IETLTAVPISK 354
Score = 346 (126.9 bits), Expect = 3.6e-28, P = 3.6e-28
Identities = 63/111 (56%), Positives = 91/111 (81%)
Query: 587 QYLLEAGWCYDTKLIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTK 646
Q+L +AGWC D KLIG+T+PRRI+ T++A RV+EE + +G VGY+IRF+D T+E T+
Sbjct: 56 QFLEKAGWCSDGKLIGVTQPRRIAATTVALRVAEEYGSEVGKEVGYSIRFEDVTSE-ATR 114
Query: 647 IKYMTEGILMREMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKILKDK 697
IK++T+G+L+RE + DPLL +YS++M+DE HER++ TDIL+GLLKKI K +
Sbjct: 115 IKFLTDGLLIREALVDPLLSRYSIVMVDEAHERSVSTDILLGLLKKIRKKR 165
Score = 265 (98.3 bits), Expect = 4.9e-25, Sum P(3) = 4.9e-25
Identities = 55/101 (54%), Positives = 73/101 (72%)
Query: 43 KFSRLYTEASFSQLNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRVAL 102
K RLYTE S++ L++ PE+QR+ L+ +LQLKALGI N+L F F +PPPA+ + AL
Sbjct: 371 KCFRLYTEESYTSLSDTNIPEVQRSNLAPFILQLKALGIDNVLHFDFLTPPPAELMTKAL 430
Query: 103 ELLYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLLSSGS 143
ELLYSLGA+D LTKP+G MAE+ + P+ AK LLS+ S
Sbjct: 431 ELLYSLGALDDYAKLTKPLGLRMAELAVDPMMAKTLLSAES 471
Score = 213 (80.0 bits), Expect = 3.4e-53, Sum P(3) = 3.4e-53
Identities = 69/257 (26%), Positives = 124/257 (48%)
Query: 610 SVTSLAN-RVSEELRTTLGHTVGYTIRFDDCTTEDVTKIKYMTEGILMREMMTDPLLRKY 668
S TSL++ + E R+ L + ++ ++V ++T E+MT L Y
Sbjct: 380 SYTSLSDTNIPEVQRSNLAP---FILQLKALGIDNVLHFDFLTPP--PAELMTKALELLY 434
Query: 669 SVIMLDEVHERTIFTDILMG------LLKKILKDKERDFECSDEIASILSLLQVQ-DIFI 721
S+ LD+ + T + M ++ K L E F C E+ +I ++ D++I
Sbjct: 435 SLGALDDYAKLTKPLGLRMAELAVDPMMAKTLLSAE-SFGCLSEMLTIAAMTSAGGDVWI 493
Query: 722 KPSSGALSLKARVLRRNFEVEQGDLLTLLNIFK-FYEKQENKKQFCHKYFFNYKVLKRAA 780
+ ++R RR F +GD LT LN+++ F K + FCH+ NYK + RA
Sbjct: 494 QHEGERKQFESR--RRKFAAGEGDHLTFLNVYQAFVTKGRKESGFCHENLLNYKTMSRAV 551
Query: 781 ELKNQMILLLKKSSIPL---VTSPRNTNA--------VLKCLTNGFFSNAAYLHYSGVYR 829
++ Q+ L++ I + + S + A + +CLT G+F++AA + G ++
Sbjct: 552 SIRAQLKRYLERFGIRVDETLASGKTRGASPGVTGEQIRRCLTTGYFAHAARMQADGTFQ 611
Query: 830 TVRGNEDLYIHPSSVLY 846
TV+G L+ HPSS+++
Sbjct: 612 TVQGGTTLHAHPSSLMF 628
Score = 104 (41.7 bits), Expect = 3.4e-53, Sum P(3) = 3.4e-53
Identities = 18/46 (39%), Positives = 32/46 (69%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILMECSRKFSR 46
+T+G+LI DP + +YS++M+D+ HER++ TDIL+ +K +
Sbjct: 118 LTDGLLIREALVDPLLSRYSIVMVDEAHERSVSTDILLGLLKKIRK 163
Score = 43 (20.2 bits), Expect = 1.8e-35, Sum P(3) = 1.8e-35
Identities = 13/57 (22%), Positives = 25/57 (43%)
Query: 579 HKVFFSFFQYLL-----EAGWCYDTKLIGITEPRRISVTSLANRVSEELRTTLGHTV 630
H F + +Q + E+G+C++ L T R +S+ + R E + T+
Sbjct: 516 HLTFLNVYQAFVTKGRKESGFCHENLLNYKTMSRAVSIRAQLKRYLERFGIRVDETL 572
Score = 42 (19.8 bits), Expect = 6.4e-13, Sum P(2) = 6.4e-13
Identities = 6/19 (31%), Positives = 15/19 (78%)
Query: 434 IIGILKQYHNQREDLKLLI 452
++G+LK+ +R +L+++I
Sbjct: 154 LLGLLKKIRKKRPELRIII 172
>RGD|1302963 [details] [associations]
symbol:Dhx16 "DEAH (Asp-Glu-Ala-His) box polypeptide 16"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1302963 GO:GO:0005524 GO:GO:0003676 EMBL:BX883048
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K12813
HOVERGEN:HBG039428 CTD:8449 EMBL:CH474118 IPI:IPI00421973
RefSeq:NP_997661.1 UniGene:Rn.6832 GeneID:294232 KEGG:rno:294232
UCSC:RGD:1302963 NextBio:637799 Genevestigator:Q6MG13
Uniprot:Q6MG13
Length = 1044
Score = 365 (133.5 bits), Expect = 4.1e-53, Sum P(4) = 4.1e-53
Identities = 71/179 (39%), Positives = 116/179 (64%)
Query: 348 RTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYYSNDPVVNYVQGVVD 407
R +LK++++SAT+D F++ +A + + G +PV ++Y+ P +Y++ V
Sbjct: 546 RPELKVLVASATLDTARFSAFFD-----DAPVFRIPGRRFPVDIFYTKAPEADYLEACVV 600
Query: 408 TAIKIHESMPVGDILAFVIGLEQIEHIIGILKQYHNQ--REDLKLLILPMHGSLPNNEQI 465
+ ++IH + P GDIL F+ G E+IE +L+ + + +LL+LP++ +LP++ Q
Sbjct: 601 SVLQIHVTQPPGDILVFLTGQEEIEAACEMLQDRCRRLGSKIRELLVLPIYANLPSDMQA 660
Query: 466 KVFRPTPRAMRKIVIATNIAETSITIPGIVYVIDPGFVKARWFNPNTLTNSLVVVPISK 524
++F+PTP RK+V+ATNIAETS+TI GI+YV+DPGF K + +NP T SL V P SK
Sbjct: 661 RIFQPTPPGARKVVVATNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSK 719
Score = 288 (106.4 bits), Expect = 2.8e-39, Sum P(2) = 2.8e-39
Identities = 54/109 (49%), Positives = 79/109 (72%)
Query: 587 QYLLEAGWCYDTKLIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTK 646
QYL E G+ I T+PRR++ S+A RV+ E+ LG+ VGY+IRF+DCT+E T
Sbjct: 437 QYLFEEGYTKKGMKIACTQPRRVAAMSVAARVAREMGVKLGNEVGYSIRFEDCTSER-TV 495
Query: 647 IKYMTEGILMREMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKILK 695
++YMT+G+L+RE +++P L YSV+M+DE HERT+ TDIL GL+K + +
Sbjct: 496 LRYMTDGMLLREFLSEPDLASYSVVMVDEAHERTLHTDILFGLIKDVAR 544
Score = 224 (83.9 bits), Expect = 5.4e-38, Sum P(3) = 5.4e-38
Identities = 48/100 (48%), Positives = 69/100 (69%)
Query: 43 KFSRLYTEASFS-QLNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRVA 101
K RLYT ++ +L E T PE+QRT L + VL LK+LGIH+++ F F PPP + L +A
Sbjct: 736 KCFRLYTAWAYQHELEETTVPEIQRTSLGNVVLLLKSLGIHDLMHFDFLDPPPYETLLLA 795
Query: 102 LELLYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLLSS 141
LE LY+LGA++ G LT G MAE+P+ P+ +K++L+S
Sbjct: 796 LEQLYALGALNHLGELTTS-GRKMAELPVDPMLSKMILAS 834
Score = 222 (83.2 bits), Expect = 4.1e-53, Sum P(4) = 4.1e-53
Identities = 53/166 (31%), Positives = 98/166 (59%)
Query: 689 LLKKILKDKERDFECSDEIASILSLLQVQD-IFIKPSSGALSL-KARVLRRNFEVEQGDL 746
+L K++ E+ + CS+EI ++ ++L V + IF +P + ARV NF + GD
Sbjct: 826 MLSKMILASEK-YSCSEEILTVAAMLSVNNSIFYRPKDKVVHADNARV---NFFLPGGDH 881
Query: 747 LTLLNIFKFYEKQENKKQFCHKYFFNYKVLKRAAELKNQMILLLKKSSIPLVTSPRNTNA 806
L LLN++ + + Q+C++ F ++ ++RA +++ Q+ LL++ + L + +
Sbjct: 882 LVLLNVYTQWAESGYSSQWCYENFVQFRSMRRARDVREQLEGLLERVEVGLTSCQGDYVR 941
Query: 807 VLKCLTNGFFSNAAYLHYSGVYRTVRGNEDLYIHPSSVLYTLQQPQ 852
V K +T+G+F + A L SG YRTV+ + ++IHP+S L+ QQP+
Sbjct: 942 VRKAITSGYFYHTARLTRSG-YRTVKQQQTVFIHPNSSLFE-QQPR 985
Score = 103 (41.3 bits), Expect = 4.1e-53, Sum P(4) = 4.1e-53
Identities = 20/50 (40%), Positives = 31/50 (62%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILMECSRKFSRLYTE 50
MT+G+L+ +P + YSV+M+D+ HERT+ TDIL + +R E
Sbjct: 499 MTDGMLLREFLSEPDLASYSVVMVDEAHERTLHTDILFGLIKDVARFRPE 548
Score = 38 (18.4 bits), Expect = 4.1e-53, Sum P(4) = 4.1e-53
Identities = 8/17 (47%), Positives = 10/17 (58%)
Query: 651 TEGILMREMMTDPLLRK 667
T G M E+ DP+L K
Sbjct: 813 TSGRKMAELPVDPMLSK 829
>ZFIN|ZDB-GENE-030131-8589 [details] [associations]
symbol:dhx16 "DEAH (Asp-Glu-Ala-His) box
polypeptide 16" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0035987
"endodermal cell differentiation" evidence=IMP] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 ZFIN:ZDB-GENE-030131-8589 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
KO:K12813 HOVERGEN:HBG039428 CTD:8449 OrthoDB:EOG4VHK5Q
GO:GO:0035987 EMBL:BC045393 IPI:IPI00495801 RefSeq:NP_956318.1
UniGene:Dr.76186 ProteinModelPortal:Q7ZVV8 STRING:Q7ZVV8
PRIDE:Q7ZVV8 GeneID:336645 KEGG:dre:336645 InParanoid:Q7ZVV8
NextBio:20811846 ArrayExpress:Q7ZVV8 Bgee:Q7ZVV8 Uniprot:Q7ZVV8
Length = 1054
Score = 364 (133.2 bits), Expect = 7.0e-53, Sum P(3) = 7.0e-53
Identities = 71/179 (39%), Positives = 115/179 (64%)
Query: 348 RTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYYSNDPVVNYVQGVVD 407
R LK++++SAT+D E F++ +A + + G +PV +YY+ P +Y++ V
Sbjct: 556 RPDLKVLVASATLDTERFSSFFD-----DAPVFRIPGRRFPVDIYYTKAPEADYLEACVV 610
Query: 408 TAIKIHESMPVGDILAFVIGLEQIEHIIGILKQYHNQ--REDLKLLILPMHGSLPNNEQI 465
+ ++IH + GD+L F+ G E+IE +L++ + + +LL+LP++ +LP++ Q
Sbjct: 611 SVLQIHVTQSPGDVLVFLTGQEEIEACCELLQERCRRLGSKISELLVLPIYANLPSDMQA 670
Query: 466 KVFRPTPRAMRKIVIATNIAETSITIPGIVYVIDPGFVKARWFNPNTLTNSLVVVPISK 524
K+F PTP RK+V+ATNIAETS+TI GI+YVIDPGF K + +N T SL+V P S+
Sbjct: 671 KIFNPTPPGARKVVVATNIAETSLTIDGIIYVIDPGFCKQKSYNAKTGMESLIVTPCSR 729
Score = 306 (112.8 bits), Expect = 5.0e-41, Sum P(2) = 5.0e-41
Identities = 59/109 (54%), Positives = 82/109 (75%)
Query: 587 QYLLEAGWCYDTKLIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTK 646
QYLLE G+ IG T+PRR++ S+A RV++E+ LG+ VGY+IRF+DCT+E T
Sbjct: 447 QYLLEEGYTKGGMKIGCTQPRRVAAMSVAARVAQEMSVKLGNEVGYSIRFEDCTSER-TI 505
Query: 647 IKYMTEGILMREMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKILK 695
+KYMT+G+L+RE +T+P L YSVI++DE HERT+ TDIL GL+K I +
Sbjct: 506 LKYMTDGMLLREFLTEPDLASYSVIIIDEAHERTLHTDILFGLIKDIAR 554
Score = 226 (84.6 bits), Expect = 1.4e-37, Sum P(3) = 1.4e-37
Identities = 48/100 (48%), Positives = 71/100 (71%)
Query: 43 KFSRLYTEASFS-QLNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRVA 101
K RLYT +F ++ E T PE+QRT L + VL LK+LGI++++ F F PPP + L +A
Sbjct: 746 KCFRLYTAWAFKHEMEETTVPEIQRTNLGNVVLLLKSLGINDLIHFDFMDPPPHETLVLA 805
Query: 102 LELLYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLLSS 141
LE LY+LGA++ G LTK +G MAE+P+ P+ +K++L+S
Sbjct: 806 LEQLYALGALNHLGELTK-LGRRMAELPVDPMLSKMILAS 844
Score = 220 (82.5 bits), Expect = 7.0e-53, Sum P(3) = 7.0e-53
Identities = 50/165 (30%), Positives = 97/165 (58%)
Query: 689 LLKKILKDKERDFECSDEIASILSLLQVQD-IFIKPSSGALSLKARVLRRNFEVEQGDLL 747
+L K++ E+ ++CS+E+ +I ++L V + IF +P + A R NF V GD L
Sbjct: 836 MLSKMILASEQ-YKCSEEVLTIAAMLSVNNSIFYRPKDKVVH--ADNARMNFVVPGGDHL 892
Query: 748 TLLNIFKFYEKQENKKQFCHKYFFNYKVLKRAAELKNQMILLLKKSSIPLVTSPRNTNAV 807
LLN++ + + Q+C + F ++ +KRA ++++Q+ L+ + + L +S ++ +
Sbjct: 893 VLLNVYTQWVESGYSTQWCFENFIQFRSMKRARDVRDQLEGLMDRIEVELCSSNGDSMPI 952
Query: 808 LKCLTNGFFSNAAYLHYSGVYRTVRGNEDLYIHPSSVLYTLQQPQ 852
K +T G+F + A L G Y+TV+ + +Y+HP+S L+ +QP+
Sbjct: 953 RKAVTAGYFYHTARLSKGG-YKTVKHQQTVYVHPNSSLFE-EQPR 995
Score = 99 (39.9 bits), Expect = 7.0e-53, Sum P(3) = 7.0e-53
Identities = 19/46 (41%), Positives = 30/46 (65%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILMECSRKFSR 46
MT+G+L+ +P + YSVI++D+ HERT+ TDIL + +R
Sbjct: 509 MTDGMLLREFLTEPDLASYSVIIIDEAHERTLHTDILFGLIKDIAR 554
Score = 38 (18.4 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 7/19 (36%), Positives = 12/19 (63%)
Query: 434 IIGILKQYHNQREDLKLLI 452
+ G++K R DLK+L+
Sbjct: 545 LFGLIKDIARFRPDLKVLV 563
>SGD|S000000815 [details] [associations]
symbol:PRP22 "DEAH-box RNA-dependent ATPase/ATP-dependent RNA
helicase" species:4932 "Saccharomyces cerevisiae" [GO:0071007
"U2-type catalytic step 2 spliceosome" evidence=IMP] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000350 "generation of catalytic spliceosome for second
transesterification step" evidence=IDA;IMP] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0000386 "second spliceosomal transesterification
activity" evidence=IMP;IDA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000390 "spliceosomal complex disassembly"
evidence=IMP] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IDA] [GO:0071021 "U2-type post-spliceosomal complex"
evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 Pfam:PF00271 Pfam:PF00575
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 SGD:S000000815 GO:GO:0005524 KO:K01897
GO:GO:0003723 EMBL:BK006939 EMBL:U18778 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 HOGENOM:HOG000175261 GO:GO:0071007 InterPro:IPR022967
SMART:SM00316 GO:GO:0000390 GeneTree:ENSGT00700000104241 KO:K12818
GO:GO:0000350 RefSeq:NP_010931.3 GeneID:856734 KEGG:sce:YER015W
OrthoDB:EOG45TGW9 EMBL:X58681 PIR:S13643 RefSeq:NP_010929.3
ProteinModelPortal:P24384 SMR:P24384 DIP:DIP-655N IntAct:P24384
MINT:MINT-648209 STRING:P24384 PaxDb:P24384 EnsemblFungi:YER013W
GeneID:856732 KEGG:sce:YER013W CYGD:YER013w OMA:QITQYLD
NextBio:982846 Genevestigator:P24384 GermOnline:YER013W
GO:GO:0071021 Uniprot:P24384
Length = 1145
Score = 366 (133.9 bits), Expect = 9.2e-53, Sum P(2) = 9.2e-53
Identities = 92/260 (35%), Positives = 145/260 (55%)
Query: 269 EMGCRMDFEYISRGYMFRKGRMKILVSKIFKMSQGK-PSDSGVEPISQSYLVELSILAPG 327
E+GC++ + GY R + ++I M+ G ++ ++P Y V + L
Sbjct: 551 EVGCKVGHDV---GYTIRFEDVTGPDTRIKYMTDGMLQREALLDPEMSKYSVIM--LDEA 605
Query: 328 GQDVIGEDMKAFAEQLKP-LKRTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHL 386
+ + D+ FA K +KR +LK+I++SAT+++ + +++ N I+++ G
Sbjct: 606 HERTVATDV-LFALLKKAAIKRPELKVIVTSATLNSAKFSEYF-----LNCPIINIPGKT 659
Query: 387 YPVSVYYSNDPVVNYVQGVVDTAIKIHESMPVGDILAFVIGLEQIEHIIGILKQYHNQRE 446
+PV V YS P ++Y++ +D I IH + GDIL F+ G E+I+ IL
Sbjct: 660 FPVEVLYSQTPQMDYIEAALDCVIDIHINEGPGDILVFLTGQEEIDSCCEILYDRVKTLG 719
Query: 447 DL--KLLILPMHGSLPNNEQIKVFRPTPRAMRKIVIATNIAETSITIPGIVYVIDPGFVK 504
D +LLILP++ +LP+ Q K+F PTP+ RK+V ATNIAETSITI GI YV+DPGF K
Sbjct: 720 DSIGELLILPVYSALPSEIQSKIFEPTPKGSRKVVFATNIAETSITIDGIYYVVDPGFAK 779
Query: 505 ARWFNPNTLTNSLVVVPISK 524
+N L+V PIS+
Sbjct: 780 INIYNARAGIEQLIVSPISQ 799
Score = 303 (111.7 bits), Expect = 2.0e-21, Sum P(2) = 2.0e-21
Identities = 61/106 (57%), Positives = 79/106 (74%)
Query: 587 QYLLEAGWCYDTKLIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTK 646
QYL E G+ + +IG T+PRR++ S+A RV+EE+ +GH VGYTIRF+D T D T+
Sbjct: 518 QYLDEEGFS-NYGMIGCTQPRRVAAVSVAKRVAEEVGCKVGHDVGYTIRFEDVTGPD-TR 575
Query: 647 IKYMTEGILMREMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKK 692
IKYMT+G+L RE + DP + KYSVIMLDE HERT+ TD+L LLKK
Sbjct: 576 IKYMTDGMLQREALLDPEMSKYSVIMLDEAHERTVATDVLFALLKK 621
Score = 270 (100.1 bits), Expect = 9.2e-53, Sum P(2) = 9.2e-53
Identities = 69/237 (29%), Positives = 121/237 (51%)
Query: 614 LANRVSEELRTTLGHTVGYTIRFDDCTTEDVTKIKYMTEGILMREMMTDPLLRKYSVIML 673
L N V E R L HT+ + D+ K +M + +M + L Y + L
Sbjct: 831 LENTVPEIQRQNLSHTI---LMLKAMGINDLLKFDFMDPP--PKNLMLNALTELYHLQSL 885
Query: 674 DEVHERT-IFTDILMGLLKKILKDK---ERDFECSDEIASILSLLQVQDIFIKPSSGALS 729
D+ + T + ++ + + L D +CSDEI +I+S+L VQ++F +P L
Sbjct: 886 DDEGKLTNLGKEMSLFPMDPTLSRSLLSSVDNQCSDEIVTIISMLSVQNVFYRPKDRQLE 945
Query: 730 LKARVLRRNFEVEQGDLLTLLNIFKFYEKQENKKQFCHKYFFNYKVLKRAAELKNQMILL 789
++ + F GD LTLLN++ +++ +Q+C F +++ LKRA ++K+Q+ ++
Sbjct: 946 ADSK--KAKFHHPYGDHLTLLNVYTRWQQANYSEQYCKTNFLHFRHLKRARDVKSQISMI 1003
Query: 790 LKKSSIPLVTSPRNTNAVLKCLTNGFFSNAAYLHYSGVYRTVRGNEDLYIHPSSVLY 846
KK + L++ + + + K +GFF NAA Y+T+ G ++ IHPSS LY
Sbjct: 1004 FKKIGLKLISCHSDPDLIRKTFVSGFFMNAAKRDSQVGYKTINGGTEVGIHPSSSLY 1060
Score = 194 (73.4 bits), Expect = 2.9e-17, Sum P(2) = 2.9e-17
Identities = 44/100 (44%), Positives = 65/100 (65%)
Query: 43 KFSRLYTEASF-SQLNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRVA 101
K RLYTE++F +++ E T PE+QR LS +L LKA+GI+++L+F F PPP + A
Sbjct: 816 KCYRLYTESAFYNEMLENTVPEIQRQNLSHTILMLKAMGINDLLKFDFMDPPPKNLMLNA 875
Query: 102 LELLYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLLSS 141
L LY L ++D G LT +G+ M+ P+ P ++ LLSS
Sbjct: 876 LTELYHLQSLDDEGKLTN-LGKEMSLFPMDPTLSRSLLSS 914
Score = 110 (43.8 bits), Expect = 4.0e-25, Sum P(3) = 4.0e-25
Identities = 22/43 (51%), Positives = 29/43 (67%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILMECSRK 43
MT+G+L DP + KYSVIMLD+ HERT+ TD+L +K
Sbjct: 579 MTDGMLQREALLDPEMSKYSVIMLDEAHERTVATDVLFALLKK 621
Score = 44 (20.5 bits), Expect = 4.0e-25, Sum P(3) = 4.0e-25
Identities = 10/27 (37%), Positives = 16/27 (59%)
Query: 137 VLLSSGSVLDSAVEILLHRLRGLCDNV 163
V L+ +DS EIL R++ L D++
Sbjct: 696 VFLTGQEEIDSCCEILYDRVKTLGDSI 722
Score = 37 (18.1 bits), Expect = 2.0e-21, Sum P(2) = 2.0e-21
Identities = 10/43 (23%), Positives = 22/43 (51%)
Query: 331 VIGEDMKAFAEQLKPLKRTQLKLIISSATVDAEEICQFYNISA 373
V+ E + + + K + Q +L + + +D E I + Y I++
Sbjct: 95 VVTEFVLSILNKSKSITEFQEQLNLMQSGLDNETIFKIYQIAS 137
>UNIPROTKB|O60231 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0003724 "RNA helicase
activity" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 EMBL:BA000025 GO:GO:0008380 GO:GO:0006397
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:AL845353 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 KO:K12813 GO:GO:0003724
HOVERGEN:HBG039428 OMA:GTLHREF EMBL:AB001601 EMBL:AB011149
EMBL:BC008825 EMBL:BC009392 IPI:IPI00552073 RefSeq:NP_001157711.1
RefSeq:NP_003578.2 UniGene:Hs.485060 ProteinModelPortal:O60231
SMR:O60231 IntAct:O60231 MINT:MINT-5003862 STRING:O60231
PhosphoSite:O60231 PaxDb:O60231 PRIDE:O60231 DNASU:8449
Ensembl:ENST00000376442 Ensembl:ENST00000383577
Ensembl:ENST00000417308 Ensembl:ENST00000421095
Ensembl:ENST00000424672 Ensembl:ENST00000451456
Ensembl:ENST00000458094 GeneID:8449 KEGG:hsa:8449 UCSC:uc003nqz.3
CTD:8449 GeneCards:GC06M030620 HGNC:HGNC:2739 HPA:HPA051455
MIM:603405 neXtProt:NX_O60231 PharmGKB:PA27205 InParanoid:O60231
OrthoDB:EOG4VHK5Q PhylomeDB:O60231 GenomeRNAi:8449 NextBio:31614
ArrayExpress:O60231 Bgee:O60231 CleanEx:HS_DHX16
Genevestigator:O60231 GermOnline:ENSG00000204560 Uniprot:O60231
Length = 1041
Score = 365 (133.5 bits), Expect = 1.3e-52, Sum P(4) = 1.3e-52
Identities = 71/179 (39%), Positives = 116/179 (64%)
Query: 348 RTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYYSNDPVVNYVQGVVD 407
R +LK++++SAT+D F++ +A + + G +PV ++Y+ P +Y++ V
Sbjct: 543 RPELKVLVASATMDTARFSTFFD-----DAPVFRIPGRRFPVDIFYTKAPEADYLEACVV 597
Query: 408 TAIKIHESMPVGDILAFVIGLEQIEHIIGILKQYHNQ--REDLKLLILPMHGSLPNNEQI 465
+ ++IH + P GDIL F+ G E+IE +L+ + + +LL+LP++ +LP++ Q
Sbjct: 598 SVLQIHVTQPPGDILVFLTGQEEIEAACEMLQDRCRRLGSKIRELLVLPIYANLPSDMQA 657
Query: 466 KVFRPTPRAMRKIVIATNIAETSITIPGIVYVIDPGFVKARWFNPNTLTNSLVVVPISK 524
++F+PTP RK+V+ATNIAETS+TI GI+YV+DPGF K + +NP T SL V P SK
Sbjct: 658 RIFQPTPPGARKVVVATNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSK 716
Score = 288 (106.4 bits), Expect = 9.2e-39, Sum P(2) = 9.2e-39
Identities = 54/109 (49%), Positives = 79/109 (72%)
Query: 587 QYLLEAGWCYDTKLIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTK 646
QYL E G+ I T+PRR++ S+A RV+ E+ LG+ VGY+IRF+DCT+E T
Sbjct: 434 QYLFEEGYTNKGMKIACTQPRRVAAMSVAARVAREMGVKLGNEVGYSIRFEDCTSER-TV 492
Query: 647 IKYMTEGILMREMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKILK 695
++YMT+G+L+RE +++P L YSV+M+DE HERT+ TDIL GL+K + +
Sbjct: 493 LRYMTDGMLLREFLSEPDLASYSVVMVDEAHERTLHTDILFGLIKDVAR 541
Score = 224 (83.9 bits), Expect = 1.8e-37, Sum P(3) = 1.8e-37
Identities = 48/100 (48%), Positives = 69/100 (69%)
Query: 43 KFSRLYTEASFS-QLNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRVA 101
K RLYT ++ +L E T PE+QRT L + VL LK+LGIH+++ F F PPP + L +A
Sbjct: 733 KCFRLYTAWAYQHELEETTVPEIQRTSLGNVVLLLKSLGIHDLMHFDFLDPPPYETLLLA 792
Query: 102 LELLYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLLSS 141
LE LY+LGA++ G LT G MAE+P+ P+ +K++L+S
Sbjct: 793 LEQLYALGALNHLGELTTS-GRKMAELPVDPMLSKMILAS 831
Score = 217 (81.4 bits), Expect = 1.3e-52, Sum P(4) = 1.3e-52
Identities = 53/166 (31%), Positives = 97/166 (58%)
Query: 689 LLKKILKDKERDFECSDEIASILSLLQVQD-IFIKPSSGALSL-KARVLRRNFEVEQGDL 746
+L K++ E+ + CS+EI ++ ++L V + IF +P + ARV NF + GD
Sbjct: 823 MLSKMILASEK-YSCSEEILTVAAMLSVNNSIFYRPKDKVVHADNARV---NFFLPGGDH 878
Query: 747 LTLLNIFKFYEKQENKKQFCHKYFFNYKVLKRAAELKNQMILLLKKSSIPLVTSPRNTNA 806
L LLN++ + + Q+C++ F ++ ++RA +++ Q+ LL++ + L + +
Sbjct: 879 LVLLNVYTQWAESGYSSQWCYENFVQFRSMRRARDVREQLEGLLERVEVGLSSCQGDYIR 938
Query: 807 VLKCLTNGFFSNAAYLHYSGVYRTVRGNEDLYIHPSSVLYTLQQPQ 852
V K +T G+F + A L SG YRTV+ + ++IHP+S L+ QQP+
Sbjct: 939 VRKAITAGYFYHTARLTRSG-YRTVKQQQTVFIHPNSSLFE-QQPR 982
Score = 103 (41.3 bits), Expect = 1.3e-52, Sum P(4) = 1.3e-52
Identities = 20/50 (40%), Positives = 31/50 (62%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILMECSRKFSRLYTE 50
MT+G+L+ +P + YSV+M+D+ HERT+ TDIL + +R E
Sbjct: 496 MTDGMLLREFLSEPDLASYSVVMVDEAHERTLHTDILFGLIKDVARFRPE 545
Score = 38 (18.4 bits), Expect = 1.3e-52, Sum P(4) = 1.3e-52
Identities = 8/17 (47%), Positives = 10/17 (58%)
Query: 651 TEGILMREMMTDPLLRK 667
T G M E+ DP+L K
Sbjct: 810 TSGRKMAELPVDPMLSK 826
>UNIPROTKB|Q5SQH5 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:CH471081 GO:GO:0003676 EMBL:BX119957 EMBL:CR753328
EMBL:CR759778 EMBL:AL732442 EMBL:BX908728 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 HOVERGEN:HBG039428
UniGene:Hs.485060 HGNC:HGNC:2739 EMBL:CR788240 EMBL:AL662798
EMBL:CU013522 IPI:IPI00644906 SMR:Q5SQH5 Ensembl:ENST00000376437
Ensembl:ENST00000414052 Ensembl:ENST00000445379
Ensembl:ENST00000449861 Ensembl:ENST00000451748
Ensembl:ENST00000453879 UCSC:uc003nqy.3 Uniprot:Q5SQH5
Length = 560
Score = 365 (133.5 bits), Expect = 1.4e-52, Sum P(4) = 1.4e-52
Identities = 71/179 (39%), Positives = 116/179 (64%)
Query: 348 RTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYYSNDPVVNYVQGVVD 407
R +LK++++SAT+D F++ +A + + G +PV ++Y+ P +Y++ V
Sbjct: 62 RPELKVLVASATMDTARFSTFFD-----DAPVFRIPGRRFPVDIFYTKAPEADYLEACVV 116
Query: 408 TAIKIHESMPVGDILAFVIGLEQIEHIIGILKQYHNQ--REDLKLLILPMHGSLPNNEQI 465
+ ++IH + P GDIL F+ G E+IE +L+ + + +LL+LP++ +LP++ Q
Sbjct: 117 SVLQIHVTQPPGDILVFLTGQEEIEAACEMLQDRCRRLGSKIRELLVLPIYANLPSDMQA 176
Query: 466 KVFRPTPRAMRKIVIATNIAETSITIPGIVYVIDPGFVKARWFNPNTLTNSLVVVPISK 524
++F+PTP RK+V+ATNIAETS+TI GI+YV+DPGF K + +NP T SL V P SK
Sbjct: 177 RIFQPTPPGARKVVVATNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSK 235
Score = 224 (83.9 bits), Expect = 3.4e-35, Sum P(3) = 3.4e-35
Identities = 48/100 (48%), Positives = 69/100 (69%)
Query: 43 KFSRLYTEASFS-QLNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRVA 101
K RLYT ++ +L E T PE+QRT L + VL LK+LGIH+++ F F PPP + L +A
Sbjct: 252 KCFRLYTAWAYQHELEETTVPEIQRTSLGNVVLLLKSLGIHDLMHFDFLDPPPYETLLLA 311
Query: 102 LELLYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLLSS 141
LE LY+LGA++ G LT G MAE+P+ P+ +K++L+S
Sbjct: 312 LEQLYALGALNHLGELTTS-GRKMAELPVDPMLSKMILAS 350
Score = 217 (81.4 bits), Expect = 1.4e-52, Sum P(4) = 1.4e-52
Identities = 53/166 (31%), Positives = 97/166 (58%)
Query: 689 LLKKILKDKERDFECSDEIASILSLLQVQD-IFIKPSSGALSL-KARVLRRNFEVEQGDL 746
+L K++ E+ + CS+EI ++ ++L V + IF +P + ARV NF + GD
Sbjct: 342 MLSKMILASEK-YSCSEEILTVAAMLSVNNSIFYRPKDKVVHADNARV---NFFLPGGDH 397
Query: 747 LTLLNIFKFYEKQENKKQFCHKYFFNYKVLKRAAELKNQMILLLKKSSIPLVTSPRNTNA 806
L LLN++ + + Q+C++ F ++ ++RA +++ Q+ LL++ + L + +
Sbjct: 398 LVLLNVYTQWAESGYSSQWCYENFVQFRSMRRARDVREQLEGLLERVEVGLSSCQGDYIR 457
Query: 807 VLKCLTNGFFSNAAYLHYSGVYRTVRGNEDLYIHPSSVLYTLQQPQ 852
V K +T G+F + A L SG YRTV+ + ++IHP+S L+ QQP+
Sbjct: 458 VRKAITAGYFYHTARLTRSG-YRTVKQQQTVFIHPNSSLFE-QQPR 501
Score = 87 (35.7 bits), Expect = 2.5e-18, Sum P(2) = 2.5e-18
Identities = 15/26 (57%), Positives = 21/26 (80%)
Query: 670 VIMLDEVHERTIFTDILMGLLKKILK 695
V+M+DE HERT+ TDIL GL+K + +
Sbjct: 35 VVMVDEAHERTLHTDILFGLIKDVAR 60
Score = 68 (29.0 bits), Expect = 1.4e-52, Sum P(4) = 1.4e-52
Identities = 14/36 (38%), Positives = 21/36 (58%)
Query: 15 SVEKYSVIMLDKVHERTIFTDILMECSRKFSRLYTE 50
S + V+M+D+ HERT+ TDIL + +R E
Sbjct: 29 SPSQLGVVMVDEAHERTLHTDILFGLIKDVARFRPE 64
Score = 38 (18.4 bits), Expect = 1.4e-52, Sum P(4) = 1.4e-52
Identities = 8/17 (47%), Positives = 10/17 (58%)
Query: 651 TEGILMREMMTDPLLRK 667
T G M E+ DP+L K
Sbjct: 329 TSGRKMAELPVDPMLSK 345
>UNIPROTKB|Q5JP46 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:AL845353 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOVERGEN:HBG039428 UniGene:Hs.485060
HGNC:HGNC:2739 IPI:IPI00292510 SMR:Q5JP46 Ensembl:ENST00000383576
UCSC:uc011ijt.2 Uniprot:Q5JP46
Length = 560
Score = 364 (133.2 bits), Expect = 1.8e-52, Sum P(4) = 1.8e-52
Identities = 71/179 (39%), Positives = 115/179 (64%)
Query: 348 RTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYYSNDPVVNYVQGVVD 407
R +LK++++SAT+D F++ A + + G +PV ++Y+ P +Y++ V
Sbjct: 62 RPELKVLVASATMDTARFSTFFD-----GAPVFRIPGRRFPVDIFYTKAPEADYLEACVV 116
Query: 408 TAIKIHESMPVGDILAFVIGLEQIEHIIGILKQYHNQ--REDLKLLILPMHGSLPNNEQI 465
+ ++IH + P GDIL F+ G E+IE +L+ + + +LL+LP++ +LP++ Q
Sbjct: 117 SVLQIHVTQPPGDILVFLTGQEEIEAACEMLQDRCRRLGSKIRELLVLPIYANLPSDMQA 176
Query: 466 KVFRPTPRAMRKIVIATNIAETSITIPGIVYVIDPGFVKARWFNPNTLTNSLVVVPISK 524
++F+PTP RK+V+ATNIAETS+TI GI+YV+DPGF K + +NP T SL V P SK
Sbjct: 177 RIFQPTPPGARKVVVATNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSK 235
Score = 224 (83.9 bits), Expect = 3.4e-35, Sum P(3) = 3.4e-35
Identities = 48/100 (48%), Positives = 69/100 (69%)
Query: 43 KFSRLYTEASFS-QLNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRVA 101
K RLYT ++ +L E T PE+QRT L + VL LK+LGIH+++ F F PPP + L +A
Sbjct: 252 KCFRLYTAWAYQHELEETTVPEIQRTSLGNVVLLLKSLGIHDLMHFDFLDPPPYETLLLA 311
Query: 102 LELLYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLLSS 141
LE LY+LGA++ G LT G MAE+P+ P+ +K++L+S
Sbjct: 312 LEQLYALGALNHLGELTTS-GRKMAELPVDPMLSKMILAS 350
Score = 217 (81.4 bits), Expect = 1.8e-52, Sum P(4) = 1.8e-52
Identities = 53/166 (31%), Positives = 97/166 (58%)
Query: 689 LLKKILKDKERDFECSDEIASILSLLQVQD-IFIKPSSGALSL-KARVLRRNFEVEQGDL 746
+L K++ E+ + CS+EI ++ ++L V + IF +P + ARV NF + GD
Sbjct: 342 MLSKMILASEK-YSCSEEILTVAAMLSVNNSIFYRPKDKVVHADNARV---NFFLPGGDH 397
Query: 747 LTLLNIFKFYEKQENKKQFCHKYFFNYKVLKRAAELKNQMILLLKKSSIPLVTSPRNTNA 806
L LLN++ + + Q+C++ F ++ ++RA +++ Q+ LL++ + L + +
Sbjct: 398 LVLLNVYTQWAESGYSSQWCYENFVQFRSMRRARDVREQLEGLLERVEVGLSSCQGDYIR 457
Query: 807 VLKCLTNGFFSNAAYLHYSGVYRTVRGNEDLYIHPSSVLYTLQQPQ 852
V K +T G+F + A L SG YRTV+ + ++IHP+S L+ QQP+
Sbjct: 458 VRKAITAGYFYHTARLTRSG-YRTVKQQQTVFIHPNSSLFE-QQPR 501
Score = 87 (35.7 bits), Expect = 2.5e-18, Sum P(2) = 2.5e-18
Identities = 15/26 (57%), Positives = 21/26 (80%)
Query: 670 VIMLDEVHERTIFTDILMGLLKKILK 695
V+M+DE HERT+ TDIL GL+K + +
Sbjct: 35 VVMVDEAHERTLHTDILFGLIKDVAR 60
Score = 68 (29.0 bits), Expect = 1.8e-52, Sum P(4) = 1.8e-52
Identities = 14/36 (38%), Positives = 21/36 (58%)
Query: 15 SVEKYSVIMLDKVHERTIFTDILMECSRKFSRLYTE 50
S + V+M+D+ HERT+ TDIL + +R E
Sbjct: 29 SPSQLGVVMVDEAHERTLHTDILFGLIKDVARFRPE 64
Score = 38 (18.4 bits), Expect = 1.8e-52, Sum P(4) = 1.8e-52
Identities = 8/17 (47%), Positives = 10/17 (58%)
Query: 651 TEGILMREMMTDPLLRK 667
T G M E+ DP+L K
Sbjct: 329 TSGRKMAELPVDPMLSK 345
>UNIPROTKB|E1BF68 [details] [associations]
symbol:DHX16 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 KO:K12813 GeneTree:ENSGT00700000104241 OMA:GTLHREF
CTD:8449 EMBL:DAAA02055402 IPI:IPI00691986 RefSeq:NP_001193139.1
UniGene:Bt.22201 PRIDE:E1BF68 Ensembl:ENSBTAT00000009148
GeneID:506405 KEGG:bta:506405 NextBio:20867594 Uniprot:E1BF68
Length = 1045
Score = 366 (133.9 bits), Expect = 2.1e-52, Sum P(4) = 2.1e-52
Identities = 72/179 (40%), Positives = 116/179 (64%)
Query: 348 RTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYYSNDPVVNYVQGVVD 407
R +LK++++SAT+D F++ +A I + G +PV ++Y+ P +Y++ V
Sbjct: 547 RPELKVLVASATLDTARFSTFFD-----DAPIFRIPGRRFPVDIFYTKAPEADYLEACVV 601
Query: 408 TAIKIHESMPVGDILAFVIGLEQIEHIIGILKQYHNQ--REDLKLLILPMHGSLPNNEQI 465
+ ++IH + P GDIL F+ G E+IE +L+ + + +LL+LP++ +LP++ Q
Sbjct: 602 SVLQIHVTQPPGDILVFLTGQEEIEAACEMLQDRCRRLGSKIRELLVLPIYANLPSDMQA 661
Query: 466 KVFRPTPRAMRKIVIATNIAETSITIPGIVYVIDPGFVKARWFNPNTLTNSLVVVPISK 524
++F+PTP RK+V+ATNIAETS+TI GI+YV+DPGF K + +NP T SL V P SK
Sbjct: 662 RIFQPTPPGARKVVVATNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSK 720
Score = 288 (106.4 bits), Expect = 1.9e-38, Sum P(2) = 1.9e-38
Identities = 54/109 (49%), Positives = 79/109 (72%)
Query: 587 QYLLEAGWCYDTKLIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTK 646
QYL E G+ I T+PRR++ S+A RV+ E+ LG+ VGY+IRF+DCT+E T
Sbjct: 438 QYLFEEGYTKKGMKIACTQPRRVAAMSVAARVAREMGVKLGNEVGYSIRFEDCTSER-TV 496
Query: 647 IKYMTEGILMREMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKILK 695
++YMT+G+L+RE +++P L YSV+M+DE HERT+ TDIL GL+K + +
Sbjct: 497 LRYMTDGMLLREFLSEPDLASYSVVMVDEAHERTLHTDILFGLIKDVAR 545
Score = 224 (83.9 bits), Expect = 3.7e-37, Sum P(3) = 3.7e-37
Identities = 48/100 (48%), Positives = 69/100 (69%)
Query: 43 KFSRLYTEASFS-QLNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRVA 101
K RLYT ++ +L E T PE+QRT L + VL LK+LGIH+++ F F PPP + L +A
Sbjct: 737 KCFRLYTAWAYQHELEETTVPEIQRTSLGNVVLLLKSLGIHDLMHFDFLDPPPYETLLLA 796
Query: 102 LELLYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLLSS 141
LE LY+LGA++ G LT G MAE+P+ P+ +K++L+S
Sbjct: 797 LEQLYALGALNHLGELTTS-GRKMAELPVDPMLSKMILAS 835
Score = 214 (80.4 bits), Expect = 2.1e-52, Sum P(4) = 2.1e-52
Identities = 52/166 (31%), Positives = 97/166 (58%)
Query: 689 LLKKILKDKERDFECSDEIASILSLLQVQD-IFIKPSSGALSL-KARVLRRNFEVEQGDL 746
+L K++ E+ + CS+EI ++ ++L V + IF +P + ARV NF + GD
Sbjct: 827 MLSKMILASEK-YSCSEEILTVAAMLSVNNSIFYRPKDKVVHADNARV---NFFLPGGDH 882
Query: 747 LTLLNIFKFYEKQENKKQFCHKYFFNYKVLKRAAELKNQMILLLKKSSIPLVTSPRNTNA 806
L LLN++ + + Q+C++ F ++ ++RA +++ Q+ LL++ + L + +
Sbjct: 883 LVLLNVYTQWAESGYSSQWCYENFVQFRSMRRARDVREQLEGLLERVEVGLSSCQGDYIR 942
Query: 807 VLKCLTNGFFSNAAYLHYSGVYRTVRGNEDLYIHPSSVLYTLQQPQ 852
V K +T G+F + A L SG YRTV+ + ++IHP+S L+ +QP+
Sbjct: 943 VRKAITAGYFYHTARLTRSG-YRTVKQQQTVFIHPNSSLFE-EQPR 986
Score = 103 (41.3 bits), Expect = 2.1e-52, Sum P(4) = 2.1e-52
Identities = 20/50 (40%), Positives = 31/50 (62%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILMECSRKFSRLYTE 50
MT+G+L+ +P + YSV+M+D+ HERT+ TDIL + +R E
Sbjct: 500 MTDGMLLREFLSEPDLASYSVVMVDEAHERTLHTDILFGLIKDVARFRPE 549
Score = 38 (18.4 bits), Expect = 2.1e-52, Sum P(4) = 2.1e-52
Identities = 8/17 (47%), Positives = 10/17 (58%)
Query: 651 TEGILMREMMTDPLLRK 667
T G M E+ DP+L K
Sbjct: 814 TSGRKMAELPVDPMLSK 830
>UNIPROTKB|F1PGL2 [details] [associations]
symbol:DHX16 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K12813
GeneTree:ENSGT00700000104241 OMA:GTLHREF CTD:8449 EMBL:AAEX03008197
RefSeq:XP_538827.2 Ensembl:ENSCAFT00000000685 GeneID:481706
KEGG:cfa:481706 Uniprot:F1PGL2
Length = 1042
Score = 365 (133.5 bits), Expect = 2.7e-52, Sum P(4) = 2.7e-52
Identities = 71/179 (39%), Positives = 116/179 (64%)
Query: 348 RTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYYSNDPVVNYVQGVVD 407
R +LK++++SAT+D F++ +A + + G +PV ++Y+ P +Y++ V
Sbjct: 544 RPELKVLVASATLDTARFSTFFD-----DAPVFRIPGRRFPVDIFYTKAPEADYLEACVV 598
Query: 408 TAIKIHESMPVGDILAFVIGLEQIEHIIGILKQYHNQ--REDLKLLILPMHGSLPNNEQI 465
+ ++IH + P GDIL F+ G E+IE +L+ + + +LL+LP++ +LP++ Q
Sbjct: 599 SVLQIHVTQPPGDILVFLTGQEEIEAACEMLQDRCRRLGSKIRELLVLPIYANLPSDMQA 658
Query: 466 KVFRPTPRAMRKIVIATNIAETSITIPGIVYVIDPGFVKARWFNPNTLTNSLVVVPISK 524
++F+PTP RK+V+ATNIAETS+TI GI+YV+DPGF K + +NP T SL V P SK
Sbjct: 659 RIFQPTPPGARKVVVATNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSK 717
Score = 288 (106.4 bits), Expect = 1.9e-38, Sum P(2) = 1.9e-38
Identities = 54/109 (49%), Positives = 79/109 (72%)
Query: 587 QYLLEAGWCYDTKLIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTK 646
QYL E G+ I T+PRR++ S+A RV+ E+ LG+ VGY+IRF+DCT+E T
Sbjct: 435 QYLFEEGYTKKGMKIACTQPRRVAAMSVAARVAREMGVKLGNEVGYSIRFEDCTSER-TV 493
Query: 647 IKYMTEGILMREMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKILK 695
++YMT+G+L+RE +++P L YSV+M+DE HERT+ TDIL GL+K + +
Sbjct: 494 LRYMTDGMLLREFLSEPDLASYSVVMVDEAHERTLHTDILFGLIKDVAR 542
Score = 224 (83.9 bits), Expect = 3.6e-37, Sum P(3) = 3.6e-37
Identities = 48/100 (48%), Positives = 69/100 (69%)
Query: 43 KFSRLYTEASFS-QLNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRVA 101
K RLYT ++ +L E T PE+QRT L + VL LK+LGIH+++ F F PPP + L +A
Sbjct: 734 KCFRLYTAWAYQHELEETTVPEIQRTSLGNVVLLLKSLGIHDLMHFDFLDPPPYETLLLA 793
Query: 102 LELLYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLLSS 141
LE LY+LGA++ G LT G MAE+P+ P+ +K++L+S
Sbjct: 794 LEQLYALGALNHLGELTTS-GRKMAELPVDPMLSKMILAS 832
Score = 214 (80.4 bits), Expect = 2.7e-52, Sum P(4) = 2.7e-52
Identities = 52/166 (31%), Positives = 97/166 (58%)
Query: 689 LLKKILKDKERDFECSDEIASILSLLQVQD-IFIKPSSGALSL-KARVLRRNFEVEQGDL 746
+L K++ E+ + CS+EI ++ ++L V + IF +P + ARV NF + GD
Sbjct: 824 MLSKMILASEK-YSCSEEILTVAAMLSVNNSIFYRPKDKVVHADNARV---NFFLPGGDH 879
Query: 747 LTLLNIFKFYEKQENKKQFCHKYFFNYKVLKRAAELKNQMILLLKKSSIPLVTSPRNTNA 806
L LLN++ + + Q+C++ F ++ ++RA +++ Q+ LL++ + L + +
Sbjct: 880 LVLLNVYTQWAESGYSSQWCYENFVQFRSMRRARDVREQLEGLLERVEVGLSSCQGDYIR 939
Query: 807 VLKCLTNGFFSNAAYLHYSGVYRTVRGNEDLYIHPSSVLYTLQQPQ 852
V K +T G+F + A L SG YRTV+ + ++IHP+S L+ +QP+
Sbjct: 940 VRKAITAGYFYHTARLTRSG-YRTVKQQQTVFIHPNSSLFE-EQPR 983
Score = 103 (41.3 bits), Expect = 2.7e-52, Sum P(4) = 2.7e-52
Identities = 20/50 (40%), Positives = 31/50 (62%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILMECSRKFSRLYTE 50
MT+G+L+ +P + YSV+M+D+ HERT+ TDIL + +R E
Sbjct: 497 MTDGMLLREFLSEPDLASYSVVMVDEAHERTLHTDILFGLIKDVARFRPE 546
Score = 38 (18.4 bits), Expect = 2.7e-52, Sum P(4) = 2.7e-52
Identities = 8/17 (47%), Positives = 10/17 (58%)
Query: 651 TEGILMREMMTDPLLRK 667
T G M E+ DP+L K
Sbjct: 811 TSGRKMAELPVDPMLSK 827
>UNIPROTKB|F1RU83 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9823 "Sus scrofa"
[GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 OMA:GTLHREF EMBL:CU480634
Ensembl:ENSSSCT00000001498 Uniprot:F1RU83
Length = 1045
Score = 365 (133.5 bits), Expect = 2.8e-52, Sum P(4) = 2.8e-52
Identities = 71/179 (39%), Positives = 116/179 (64%)
Query: 348 RTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYYSNDPVVNYVQGVVD 407
R +LK++++SAT+D F++ +A + + G +PV ++Y+ P +Y++ V
Sbjct: 547 RPELKVLVASATLDTARFSTFFD-----DAPVFRIPGRRFPVDIFYTKAPEADYLEACVV 601
Query: 408 TAIKIHESMPVGDILAFVIGLEQIEHIIGILKQYHNQ--REDLKLLILPMHGSLPNNEQI 465
+ ++IH + P GDIL F+ G E+IE +L+ + + +LL+LP++ +LP++ Q
Sbjct: 602 SVLQIHVTQPPGDILVFLTGQEEIEAACEMLQDRCRRLGSKIRELLVLPIYANLPSDMQA 661
Query: 466 KVFRPTPRAMRKIVIATNIAETSITIPGIVYVIDPGFVKARWFNPNTLTNSLVVVPISK 524
++F+PTP RK+V+ATNIAETS+TI GI+YV+DPGF K + +NP T SL V P SK
Sbjct: 662 RIFQPTPPGARKVVVATNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSK 720
Score = 289 (106.8 bits), Expect = 1.5e-38, Sum P(2) = 1.5e-38
Identities = 54/109 (49%), Positives = 79/109 (72%)
Query: 587 QYLLEAGWCYDTKLIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTK 646
QYL E G+ I T+PRR++ S+A RV+ E+ LG+ VGY+IRF+DCT+E T
Sbjct: 438 QYLFEEGYTQKGMKIACTQPRRVAAMSVAARVAREMGVKLGNEVGYSIRFEDCTSER-TV 496
Query: 647 IKYMTEGILMREMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKILK 695
++YMT+G+L+RE +++P L YSV+M+DE HERT+ TDIL GL+K + +
Sbjct: 497 LRYMTDGMLLREFLSEPDLASYSVVMVDEAHERTLHTDILFGLIKDVAR 545
Score = 224 (83.9 bits), Expect = 3.7e-37, Sum P(3) = 3.7e-37
Identities = 48/100 (48%), Positives = 69/100 (69%)
Query: 43 KFSRLYTEASFS-QLNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRVA 101
K RLYT ++ +L E T PE+QRT L + VL LK+LGIH+++ F F PPP + L +A
Sbjct: 737 KCFRLYTAWAYQHELEETTVPEIQRTSLGNVVLLLKSLGIHDLMHFDFLDPPPYETLLLA 796
Query: 102 LELLYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLLSS 141
LE LY+LGA++ G LT G MAE+P+ P+ +K++L+S
Sbjct: 797 LEQLYALGALNHLGELTTS-GRKMAELPVDPMLSKMILAS 835
Score = 214 (80.4 bits), Expect = 2.8e-52, Sum P(4) = 2.8e-52
Identities = 52/166 (31%), Positives = 97/166 (58%)
Query: 689 LLKKILKDKERDFECSDEIASILSLLQVQD-IFIKPSSGALSL-KARVLRRNFEVEQGDL 746
+L K++ E+ + CS+EI ++ ++L V + IF +P + ARV NF + GD
Sbjct: 827 MLSKMILASEK-YSCSEEILTVAAMLSVNNSIFYRPKDKVVHADNARV---NFFLPGGDH 882
Query: 747 LTLLNIFKFYEKQENKKQFCHKYFFNYKVLKRAAELKNQMILLLKKSSIPLVTSPRNTNA 806
L LLN++ + + Q+C++ F ++ ++RA +++ Q+ LL++ + L + +
Sbjct: 883 LVLLNVYTQWAESGYSSQWCYENFVQFRSMRRARDVREQLEGLLERVEVGLSSCQGDYIR 942
Query: 807 VLKCLTNGFFSNAAYLHYSGVYRTVRGNEDLYIHPSSVLYTLQQPQ 852
V K +T G+F + A L SG YRTV+ + ++IHP+S L+ +QP+
Sbjct: 943 VRKAITAGYFYHTARLTRSG-YRTVKQQQTVFIHPNSSLFE-EQPR 986
Score = 103 (41.3 bits), Expect = 2.8e-52, Sum P(4) = 2.8e-52
Identities = 20/50 (40%), Positives = 31/50 (62%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILMECSRKFSRLYTE 50
MT+G+L+ +P + YSV+M+D+ HERT+ TDIL + +R E
Sbjct: 500 MTDGMLLREFLSEPDLASYSVVMVDEAHERTLHTDILFGLIKDVARFRPE 549
Score = 38 (18.4 bits), Expect = 2.8e-52, Sum P(4) = 2.8e-52
Identities = 8/17 (47%), Positives = 10/17 (58%)
Query: 651 TEGILMREMMTDPLLRK 667
T G M E+ DP+L K
Sbjct: 814 TSGRKMAELPVDPMLSK 830
>UNIPROTKB|Q767K6 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9823 "Sus scrofa"
[GO:0005634 "nucleus" evidence=IEA] [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005634 GO:GO:0008380
GO:GO:0006397 GO:GO:0003676 EMBL:AB113357 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AB113356 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
KO:K12813 HOVERGEN:HBG039428 CTD:8449 OrthoDB:EOG4VHK5Q
RefSeq:NP_001116578.1 UniGene:Ssc.15273 ProteinModelPortal:Q767K6
GeneID:100144456 KEGG:ssc:100144456 Uniprot:Q767K6
Length = 1045
Score = 365 (133.5 bits), Expect = 2.8e-52, Sum P(4) = 2.8e-52
Identities = 71/179 (39%), Positives = 116/179 (64%)
Query: 348 RTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYYSNDPVVNYVQGVVD 407
R +LK++++SAT+D F++ +A + + G +PV ++Y+ P +Y++ V
Sbjct: 547 RPELKVLVASATLDTARFSTFFD-----DAPVFRIPGRRFPVDIFYTKAPEADYLEACVV 601
Query: 408 TAIKIHESMPVGDILAFVIGLEQIEHIIGILKQYHNQ--REDLKLLILPMHGSLPNNEQI 465
+ ++IH + P GDIL F+ G E+IE +L+ + + +LL+LP++ +LP++ Q
Sbjct: 602 SVLQIHVTQPPGDILVFLTGQEEIEAACEMLQDRCRRLGSKIRELLVLPIYANLPSDMQA 661
Query: 466 KVFRPTPRAMRKIVIATNIAETSITIPGIVYVIDPGFVKARWFNPNTLTNSLVVVPISK 524
++F+PTP RK+V+ATNIAETS+TI GI+YV+DPGF K + +NP T SL V P SK
Sbjct: 662 RIFQPTPPGARKVVVATNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSK 720
Score = 289 (106.8 bits), Expect = 1.5e-38, Sum P(2) = 1.5e-38
Identities = 54/109 (49%), Positives = 79/109 (72%)
Query: 587 QYLLEAGWCYDTKLIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTK 646
QYL E G+ I T+PRR++ S+A RV+ E+ LG+ VGY+IRF+DCT+E T
Sbjct: 438 QYLFEEGYTQKGMKIACTQPRRVAAMSVAARVAREMGVKLGNEVGYSIRFEDCTSER-TV 496
Query: 647 IKYMTEGILMREMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKILK 695
++YMT+G+L+RE +++P L YSV+M+DE HERT+ TDIL GL+K + +
Sbjct: 497 LRYMTDGMLLREFLSEPDLASYSVVMVDEAHERTLHTDILFGLIKDVAR 545
Score = 224 (83.9 bits), Expect = 3.7e-37, Sum P(3) = 3.7e-37
Identities = 48/100 (48%), Positives = 69/100 (69%)
Query: 43 KFSRLYTEASFS-QLNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRVA 101
K RLYT ++ +L E T PE+QRT L + VL LK+LGIH+++ F F PPP + L +A
Sbjct: 737 KCFRLYTAWAYQHELEETTVPEIQRTSLGNVVLLLKSLGIHDLMHFDFLDPPPYETLLLA 796
Query: 102 LELLYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLLSS 141
LE LY+LGA++ G LT G MAE+P+ P+ +K++L+S
Sbjct: 797 LEQLYALGALNHLGELTTS-GRKMAELPVDPMLSKMILAS 835
Score = 214 (80.4 bits), Expect = 2.8e-52, Sum P(4) = 2.8e-52
Identities = 52/166 (31%), Positives = 97/166 (58%)
Query: 689 LLKKILKDKERDFECSDEIASILSLLQVQD-IFIKPSSGALSL-KARVLRRNFEVEQGDL 746
+L K++ E+ + CS+EI ++ ++L V + IF +P + ARV NF + GD
Sbjct: 827 MLSKMILASEK-YSCSEEILTVAAMLSVNNSIFYRPKDKVVHADNARV---NFFLPGGDH 882
Query: 747 LTLLNIFKFYEKQENKKQFCHKYFFNYKVLKRAAELKNQMILLLKKSSIPLVTSPRNTNA 806
L LLN++ + + Q+C++ F ++ ++RA +++ Q+ LL++ + L + +
Sbjct: 883 LVLLNVYTQWAESGYSSQWCYENFVQFRSMRRARDVREQLEGLLERVEVGLSSCQGDYIR 942
Query: 807 VLKCLTNGFFSNAAYLHYSGVYRTVRGNEDLYIHPSSVLYTLQQPQ 852
V K +T G+F + A L SG YRTV+ + ++IHP+S L+ +QP+
Sbjct: 943 VRKAITAGYFYHTARLTRSG-YRTVKQQQTVFIHPNSSLFE-EQPR 986
Score = 103 (41.3 bits), Expect = 2.8e-52, Sum P(4) = 2.8e-52
Identities = 20/50 (40%), Positives = 31/50 (62%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILMECSRKFSRLYTE 50
MT+G+L+ +P + YSV+M+D+ HERT+ TDIL + +R E
Sbjct: 500 MTDGMLLREFLSEPDLASYSVVMVDEAHERTLHTDILFGLIKDVARFRPE 549
Score = 38 (18.4 bits), Expect = 2.8e-52, Sum P(4) = 2.8e-52
Identities = 8/17 (47%), Positives = 10/17 (58%)
Query: 651 TEGILMREMMTDPLLRK 667
T G M E+ DP+L K
Sbjct: 814 TSGRKMAELPVDPMLSK 830
>UNIPROTKB|G4NHA6 [details] [associations]
symbol:MGG_03893 "Pre-mRNA-splicing factor ATP-dependent
RNA helicase prp43" species:242507 "Magnaporthe oryzae 70-15"
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 EMBL:CM001236 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 KO:K12820 RefSeq:XP_003719983.1
EnsemblFungi:MGG_03893T0 GeneID:2677480 KEGG:mgr:MGG_03893
Uniprot:G4NHA6
Length = 779
Score = 317 (116.6 bits), Expect = 4.0e-52, Sum P(3) = 4.0e-52
Identities = 76/200 (38%), Positives = 121/200 (60%)
Query: 336 MKAFAEQLKPLKRTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYYSN 395
+ A +QL L+R+ LK+II SAT+DA + +++ A IL+V G +PV ++Y+
Sbjct: 241 LMALLKQLS-LRRSDLKIIIMSATLDAAKFQRYF-----FEAPILAVPGRTHPVEIFYTA 294
Query: 396 DPVVNYVQGVVDTAIKIHESMPVGDILAFVIGLEQIEHIIGILKQYHNQ--RE-DL-KLL 451
+ +Y++ V T ++IH + GDIL F+ G E+IE + ++ ++ R+ D +
Sbjct: 295 EAERDYIEASVRTVLQIHATEAEGDILLFLTGEEEIEDVCRKVRLEVDELIRDADCGPME 354
Query: 452 ILPMHGSLPNNEQIKVFRPTP-------RAMRKIVIATNIAETSITIPGIVYVIDPGFVK 504
+ P++G+LP +Q K+F P R RK ++ATNIAETS+TI GIVYV+DPGF K
Sbjct: 355 VYPLYGTLPPQQQQKIFNAAPPPLKKGGRPGRKCIVATNIAETSLTIDGIVYVVDPGFSK 414
Query: 505 ARWFNPNTLTNSLVVVPISK 524
+ +N SL+V PIS+
Sbjct: 415 QKIYNARIRVESLLVTPISR 434
Score = 254 (94.5 bits), Expect = 7.2e-38, Sum P(2) = 7.2e-38
Identities = 49/95 (51%), Positives = 71/95 (74%)
Query: 599 KLIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTKIKYMTEGILMRE 658
K++ T+PRR++ S+A RV++EL LG VGY+IRF++ TT T +KYMT+G L+RE
Sbjct: 155 KMVACTQPRRVAAMSVAQRVADELDVELGQEVGYSIRFENKTTPS-TILKYMTDGQLLRE 213
Query: 659 MMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKI 693
+ DP + +YS I++DE HERT+ TDILM LLK++
Sbjct: 214 TIHDPNMTRYSCIIIDEAHERTLATDILMALLKQL 248
Score = 240 (89.5 bits), Expect = 4.0e-52, Sum P(3) = 4.0e-52
Identities = 54/158 (34%), Positives = 98/158 (62%)
Query: 700 DFECSDEIASILSLLQVQDIFIKPSSGALSLKARVLRRNFEVEQGDLLTLLNIFKFYEKQ 759
+F CS+E+ S+ SLL V +F++P++ +A ++ +F+ +GD LTLLN + ++ +
Sbjct: 551 EFYCSNEMLSVTSLLSVPQVFMRPANNRK--RADEMKEHFKHMEGDHLTLLNAYHAFKSE 608
Query: 760 ENK----KQFCHKYFFNYKVLKRAAELKNQMILLLKKSSIPLVTSP---RN--TNAVLKC 810
K K++CH++F +Y+ L A ++ Q+ ++++ + LV++P +N TN + +C
Sbjct: 609 MAKGTDMKKWCHEHFLSYRHLSSADNVRAQLKGIMERQDLELVSTPFTDKNYYTN-IRRC 667
Query: 811 LTNGFFSNAAYLHYSG-VYRTVRGNEDLYIHPSSVLYT 847
L GFF A SG VY T++ N+++ +HPSSVL T
Sbjct: 668 LVAGFFMQVALRETSGKVYHTIKDNQNVMLHPSSVLTT 705
Score = 177 (67.4 bits), Expect = 6.6e-37, Sum P(3) = 6.6e-37
Identities = 42/100 (42%), Positives = 63/100 (63%)
Query: 43 KFSRLYTEASFS-QLNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRVA 101
K RLYTEA+F +L E T PE+ R+ LS+ +L+LK LG+ +++ F F PP + + A
Sbjct: 451 KCFRLYTEAAFKKELIEQTYPEILRSNLSNTILELKKLGVDDLVHFDFMDPPAPETMMRA 510
Query: 102 LELLYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLLSS 141
LE L L ++ +G+LT +G +E PL P A +L+SS
Sbjct: 511 LEELNYLSCLNDDGDLTD-LGHMASEYPLDPALAVMLVSS 549
Score = 115 (45.5 bits), Expect = 4.0e-52, Sum P(3) = 4.0e-52
Identities = 21/45 (46%), Positives = 32/45 (71%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILMECSRKFS 45
MT+G L+ HDP++ +YS I++D+ HERT+ TDILM ++ S
Sbjct: 205 MTDGQLLRETIHDPNMTRYSCIIIDEAHERTLATDILMALLKQLS 249
>UNIPROTKB|G4N1N4 [details] [associations]
symbol:MGG_07501 "ATP-dependent RNA helicase DHX8"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 EMBL:CM001233 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K12813 RefSeq:XP_003711413.1
EnsemblFungi:MGG_07501T0 GeneID:2683421 KEGG:mgr:MGG_07501
Uniprot:G4N1N4
Length = 1016
Score = 382 (139.5 bits), Expect = 4.8e-52, Sum P(4) = 4.8e-52
Identities = 80/180 (44%), Positives = 117/180 (65%)
Query: 347 KRTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYYSNDPVVNYVQGVV 406
+R LKL+ISSAT++AE+ +++ +A I ++ G YPV +YY+ P NY+ +
Sbjct: 516 ERKDLKLLISSATMNAEKFASYFD-----DAPIFNIPGRRYPVDIYYTPAPEANYLSAAI 570
Query: 407 DTAIKIHESMPVGDILAFVIGLEQIEHI-IGILKQYHNQREDLK-LLILPMHGSLPNNEQ 464
T +IH + P GDIL F+ G ++IE + I + +K L+I P++ +LP+ Q
Sbjct: 571 TTVFQIHTTQPKGDILIFLTGQDEIEAAEMQITETARKLGSRVKELVICPIYANLPSELQ 630
Query: 465 IKVFRPTPRAMRKIVIATNIAETSITIPGIVYVIDPGFVKARWFNPNTLTNSLVVVPISK 524
K+F PTP RK+V+ATNIAETS+TI GIVYVIDPG+VK +NP T ++LVVVP S+
Sbjct: 631 SKIFEPTPENARKVVLATNIAETSLTIDGIVYVIDPGYVKENVYNPATGMSNLVVVPCSR 690
Score = 297 (109.6 bits), Expect = 4.7e-37, Sum P(2) = 4.7e-37
Identities = 55/112 (49%), Positives = 83/112 (74%)
Query: 587 QYLLEAGWCYDTKLIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTK 646
QYL EAG+ D +G T+PRR++ S+A RV++E+ +G+ VGY+IRF+D T D T
Sbjct: 408 QYLHEAGYTKDGMRVGCTQPRRVAAMSVAARVADEMGVKVGNEVGYSIRFED-NTSDKTI 466
Query: 647 IKYMTEGILMREMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKILKDKE 698
+KYMT+G+L+RE MT+P L YS +M+DE HERT+ TDIL+ L+K + ++++
Sbjct: 467 LKYMTDGMLLREFMTEPDLSSYSALMIDEAHERTVHTDILLALVKDLARERK 518
Score = 207 (77.9 bits), Expect = 5.8e-33, Sum P(3) = 5.8e-33
Identities = 48/112 (42%), Positives = 71/112 (63%)
Query: 43 KFSRLYTEASF-SQLNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRVA 101
K RLYT+ ++ +++ E T PE+QRT L+ VLQLK+LGI+ +L F F PPP + L A
Sbjct: 707 KCFRLYTKYAYMNEMEESTTPEIQRTNLNGVVLQLKSLGINELLDFEFMDPPPTEALIGA 766
Query: 102 LELLYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLLSSGSVLDSAVEILL 153
L L++L ++ G LTK +G MAE P P+ AK +L++ + VE +L
Sbjct: 767 LNQLFALQGLNHKGELTK-LGRQMAEFPTDPMLAKAVLAADK--EGCVEEVL 815
Score = 191 (72.3 bits), Expect = 4.8e-52, Sum P(4) = 4.8e-52
Identities = 55/169 (32%), Positives = 89/169 (52%)
Query: 689 LLKKILK-DKERDFECSDEIASILSLL-QVQDIFIKPSSGALSLKARVLRRNFEVEQG-D 745
L K +L DKE C +E+ SI+++L + +F +P + A R F V++G D
Sbjct: 798 LAKAVLAADKEG---CVEEVLSIVAMLSEASALFFRPKDK--QVHADAARGRFTVKEGGD 852
Query: 746 LLTLLNIFKFYEKQENKKQFCHKYFFNYKVLKRAAELKNQMILLLKKSSIPLVTSPRNTN 805
+TLLNI+ + + + + F + L RA +++ Q+ L ++ + L T +N
Sbjct: 853 HVTLLNIWNQWLDSDYSPIWSKENFLQQRSLTRARDVREQLSKLCERVEVTLSTCGGISN 912
Query: 806 A--VLKCLTNGFFSNAAYLHYSG-VYRTVRGNEDLYIHPSSVLYTLQQP 851
+ + +T GFF NAA + SG YRTV+ N +YIHPSSV+ P
Sbjct: 913 MPPIKRAITAGFFPNAARMQRSGDSYRTVKNNTTVYIHPSSVMMQEDPP 961
Score = 103 (41.3 bits), Expect = 4.8e-52, Sum P(4) = 4.8e-52
Identities = 18/46 (39%), Positives = 30/46 (65%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILMECSRKFSR 46
MT+G+L+ +P + YS +M+D+ HERT+ TDIL+ + +R
Sbjct: 470 MTDGMLLREFMTEPDLSSYSALMIDEAHERTVHTDILLALVKDLAR 515
Score = 44 (20.5 bits), Expect = 1.4e-09, Sum P(3) = 1.4e-09
Identities = 8/19 (42%), Positives = 14/19 (73%)
Query: 434 IIGILKQYHNQREDLKLLI 452
++ ++K +R+DLKLLI
Sbjct: 506 LLALVKDLARERKDLKLLI 524
Score = 39 (18.8 bits), Expect = 4.8e-52, Sum P(4) = 4.8e-52
Identities = 10/23 (43%), Positives = 14/23 (60%)
Query: 653 GILMREMMTDPLLRKYSVIMLDE 675
G M E TDP+L K +V+ D+
Sbjct: 786 GRQMAEFPTDPMLAK-AVLAADK 807
>TAIR|locus:2033723 [details] [associations]
symbol:ESP3 "ENHANCED SILENCING PHENOTYPE 3" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0009793 "embryo development ending in seed
dormancy" evidence=NAS] [GO:0008380 "RNA splicing" evidence=NAS]
[GO:0035194 "posttranscriptional gene silencing by RNA"
evidence=IMP] [GO:0016020 "membrane" evidence=IDA] [GO:0006306 "DNA
methylation" evidence=RCA] [GO:0006342 "chromatin silencing"
evidence=RCA] [GO:0007267 "cell-cell signaling" evidence=RCA]
[GO:0009616 "virus induced gene silencing" evidence=RCA]
[GO:0010267 "production of ta-siRNAs involved in RNA interference"
evidence=RCA] [GO:0035196 "production of miRNAs involved in gene
silencing by miRNA" evidence=RCA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0008380 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
KO:K12813 GO:GO:0035194 OMA:GTLHREF EMBL:AY074318 EMBL:AY133872
IPI:IPI00543041 RefSeq:NP_174527.2 UniGene:At.40132
ProteinModelPortal:Q8VY00 IntAct:Q8VY00 PaxDb:Q8VY00 PRIDE:Q8VY00
EnsemblPlants:AT1G32490.1 GeneID:840143 KEGG:ath:AT1G32490
TAIR:At1g32490 InParanoid:Q8VY00 PhylomeDB:Q8VY00
ProtClustDB:CLSN2685836 ArrayExpress:Q8VY00 Genevestigator:Q8VY00
Uniprot:Q8VY00
Length = 1044
Score = 380 (138.8 bits), Expect = 4.8e-52, Sum P(4) = 4.8e-52
Identities = 87/209 (41%), Positives = 118/209 (56%)
Query: 348 RTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYYSNDPVVNYVQGVVD 407
R LKL+ISSAT+DAE+ +++ A I S G YPV + Y++ P +Y+ +
Sbjct: 547 RPDLKLLISSATMDAEKFSDYFD-----TAPIFSFPGRRYPVEINYTSAPEADYMDAAIV 601
Query: 408 TAIKIHESMPVGDILAFVIGLEQIEHIIGILKQYHNQR----EDLKLLILPMHGSLPNNE 463
T + IH P+GDIL F G E+IE ILK H R + +L+I P++ +LP+
Sbjct: 602 TILTIHVREPLGDILVFFTGQEEIETAEEILK--HRIRGLGTKIRELIICPIYANLPSEL 659
Query: 464 QIKVFRPTPRAMRKIVIATNIAETSITIPGIVYVIDPGFVKARWFNPNTLTNSLVVVPIS 523
Q K+F PTP RK+V+ATNIAETS+TI GI YV+DPGF K + +NP T SL++ PIS
Sbjct: 660 QAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVVDPGFSKMKSYNPRTGMESLLITPIS 719
Query: 524 KXXXXXXXXXXXXXXXXHVYR--KNFMYN 550
K YR F YN
Sbjct: 720 KASATQRAGRAGRTSPGKCYRLYTAFNYN 748
Score = 300 (110.7 bits), Expect = 1.1e-38, Sum P(2) = 1.1e-38
Identities = 58/109 (53%), Positives = 83/109 (76%)
Query: 587 QYLLEAGWCYDTKLIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTK 646
QYL EAG+ K +G T+PRR++ S+A RV++E+ LGH VGY+IRF+DCT+ D T
Sbjct: 439 QYLHEAGYTKRGK-VGCTQPRRVAAMSVAARVAQEMGVKLGHEVGYSIRFEDCTS-DKTV 496
Query: 647 IKYMTEGILMREMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKILK 695
+KYMT+G+L+RE++ +P L YSV+++DE HERT+ TDIL GL+K I +
Sbjct: 497 LKYMTDGMLLRELLGEPDLASYSVVIVDEAHERTLSTDILFGLVKDIAR 545
Score = 230 (86.0 bits), Expect = 6.0e-36, Sum P(3) = 6.0e-36
Identities = 50/100 (50%), Positives = 70/100 (70%)
Query: 43 KFSRLYTEASFSQ-LNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRVA 101
K RLYT +++ L E T PE+QRT L+S VL LK+LGIH+++ F F PPPA+ L +
Sbjct: 737 KCYRLYTAFNYNNDLEENTVPEVQRTNLASVVLALKSLGIHDLINFDFMDPPPAEALVKS 796
Query: 102 LELLYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLLSS 141
LELL++LGA++ G LTK G MAE PL P+ +K+++ S
Sbjct: 797 LELLFALGALNKLGELTK-AGRRMAEFPLDPMLSKMIVVS 835
Score = 204 (76.9 bits), Expect = 4.8e-52, Sum P(4) = 4.8e-52
Identities = 47/159 (29%), Positives = 91/159 (57%)
Query: 689 LLKKILKDKERDFECSDEIASILSLLQVQ-DIFIKPSSGALSLKARVLRRNFEVEQ-GDL 746
+L K++ ++ ++CSDEI SI ++L + IF +P + A R NF GD
Sbjct: 827 MLSKMIVVSDK-YKCSDEIISIAAMLSIGGSIFYRPKDK--QVHADNARMNFHTGNVGDH 883
Query: 747 LTLLNIFKFYEKQENKKQFCHKYFFNYKVLKRAAELKNQMILLLKKSSIPLVTSPRNTNA 806
+ LL ++ +++ Q+C++ + + +KRA ++++Q+ LL++ I + ++ ++
Sbjct: 884 IALLKVYSSWKETNFSTQWCYENYIQVRSMKRARDIRDQLEGLLERVEIDISSNLNELDS 943
Query: 807 VLKCLTNGFFSNAAYLHYSGVYRTVRGNEDLYIHPSSVL 845
V K + GFF + A L +G YRTV+ + ++IHP+S L
Sbjct: 944 VRKSIVAGFFPHTAKLQKNGSYRTVKHPQTVHIHPNSGL 982
Score = 95 (38.5 bits), Expect = 4.8e-52, Sum P(4) = 4.8e-52
Identities = 18/46 (39%), Positives = 30/46 (65%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILMECSRKFSR 46
MT+G+L+ +P + YSV+++D+ HERT+ TDIL + +R
Sbjct: 500 MTDGMLLRELLGEPDLASYSVVIVDEAHERTLSTDILFGLVKDIAR 545
Score = 49 (22.3 bits), Expect = 1.6e-16, Sum P(4) = 1.6e-16
Identities = 10/23 (43%), Positives = 15/23 (65%)
Query: 137 VLLSSGSVLDSAVEILLHRLRGL 159
V + +++A EIL HR+RGL
Sbjct: 617 VFFTGQEEIETAEEILKHRIRGL 639
Score = 41 (19.5 bits), Expect = 6.1e-10, Sum P(4) = 6.1e-10
Identities = 9/19 (47%), Positives = 12/19 (63%)
Query: 434 IIGILKQYHNQREDLKLLI 452
+ G++K R DLKLLI
Sbjct: 536 LFGLVKDIARFRPDLKLLI 554
Score = 37 (18.1 bits), Expect = 4.8e-52, Sum P(4) = 4.8e-52
Identities = 10/29 (34%), Positives = 16/29 (55%)
Query: 644 VTKIKYMTE-GILMREMMTDPLLRKYSVI 671
+ K+ +T+ G M E DP+L K V+
Sbjct: 806 LNKLGELTKAGRRMAEFPLDPMLSKMIVV 834
Score = 37 (18.1 bits), Expect = 4.9e-46, Sum P(4) = 4.9e-46
Identities = 12/64 (18%), Positives = 29/64 (45%)
Query: 46 RLYTEASFS-QLNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRVALEL 104
+L E +S + +CT + ++ +L + LG ++ +S A ++ ++
Sbjct: 476 KLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLRELLGEPDLASYSVVIVDEAHERTLSTDI 535
Query: 105 LYSL 108
L+ L
Sbjct: 536 LFGL 539
Score = 37 (18.1 bits), Expect = 6.8e-16, Sum P(3) = 6.8e-16
Identities = 16/54 (29%), Positives = 26/54 (48%)
Query: 611 VTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTKIKYMTEGILMREMMTDPL 664
VT L V E L L V +T + + T E++ K + G +RE++ P+
Sbjct: 601 VTILTIHVREPLGDIL---VFFTGQEEIETAEEILKHRIRGLGTKIRELIICPI 651
>TAIR|locus:2062492 [details] [associations]
symbol:MEE29 "maternal effect embryo arrest 29"
species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0009793 "embryo development ending in
seed dormancy" evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:CP002685 GO:GO:0003676 GO:GO:0009793
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 OMA:RIDDHRD IPI:IPI00520097
RefSeq:NP_181077.3 UniGene:At.53041 ProteinModelPortal:F4IJV4
SMR:F4IJV4 PRIDE:F4IJV4 EnsemblPlants:AT2G35340.1 GeneID:818101
KEGG:ath:AT2G35340 Uniprot:F4IJV4
Length = 1044
Score = 373 (136.4 bits), Expect = 1.0e-51, Sum P(3) = 1.0e-51
Identities = 83/207 (40%), Positives = 116/207 (56%)
Query: 348 RTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYYSNDPVVNYVQGVVD 407
R LKL+ISSAT+DAE+ F++ A I G YPV + ++ P +Y+ +
Sbjct: 547 RPDLKLLISSATMDAEKFSDFFD-----QAPIFRFPGRRYPVDICFTTAPEADYMDAAIT 601
Query: 408 TAIKIHESMPVGDILAFVIGLEQIEHIIGILKQYHNQR----EDLKLLILPMHGSLPNNE 463
T + IH P+GD+L F+ G E+IE + LK H R + +L+I P++ +LP+
Sbjct: 602 TVLTIHVKEPLGDVLVFLPGQEEIEAVEENLK--HKIRGLGTKIRELIICPIYANLPSEL 659
Query: 464 QIKVFRPTPRAMRKIVIATNIAETSITIPGIVYVIDPGFVKARWFNPNTLTNSLVVVPIS 523
Q K+F PTP RK+V+ATNIAETS+TI GI YV+DPGF K + +NP T SL+V PIS
Sbjct: 660 QAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVVDPGFSKMKSYNPRTGMESLLVTPIS 719
Query: 524 KXXXXXXXXXXXXXXXXHVYRKNFMYN 550
K YR +N
Sbjct: 720 KASATQRTGRAGRTSPGKCYRLYTAFN 746
Score = 297 (109.6 bits), Expect = 2.2e-38, Sum P(2) = 2.2e-38
Identities = 61/111 (54%), Positives = 85/111 (76%)
Query: 587 QYLLEAGWCYDTKL--IGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDV 644
QYL EAG+ TKL +G T+PRR++ S+A RV++E+ LGH VGY+IRF+DCT+E
Sbjct: 439 QYLHEAGY---TKLGKVGCTQPRRVAAMSVAARVAQEMGGKLGHEVGYSIRFEDCTSEK- 494
Query: 645 TKIKYMTEGILMREMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKILK 695
T +KYMT+G+L+RE++ +P L YSVI++DE HERT+ TDIL GL+K I +
Sbjct: 495 TILKYMTDGMLLRELLGEPDLGSYSVIIVDEAHERTLRTDILFGLVKDIAR 545
Score = 232 (86.7 bits), Expect = 4.6e-36, Sum P(3) = 4.6e-36
Identities = 50/100 (50%), Positives = 70/100 (70%)
Query: 43 KFSRLYTEASF-SQLNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRVA 101
K RLYT ++ + L + T PE+QRT L+S VL LK+LGIHN+L F F PPP++ L +
Sbjct: 737 KCYRLYTAFNYYNDLEDNTVPEIQRTNLASVVLSLKSLGIHNLLNFDFMDPPPSEALIKS 796
Query: 102 LELLYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLLSS 141
LELL++LGA++ G LTK G MAE PL P+ +K+++ S
Sbjct: 797 LELLFALGALNQLGELTK-AGRRMAEFPLDPMLSKMIVVS 835
Score = 204 (76.9 bits), Expect = 1.0e-51, Sum P(3) = 1.0e-51
Identities = 46/159 (28%), Positives = 91/159 (57%)
Query: 689 LLKKILKDKERDFECSDEIASILSLLQV-QDIFIKPSSGALSLKARVLRRNFEVEQ-GDL 746
+L K++ ++ ++CSDEI SI ++L + IF +P + A +NF V GD
Sbjct: 827 MLSKMIVVSDK-YKCSDEIISIAAMLSIGPSIFYRPKDK--QVHADNAMKNFHVGNVGDH 883
Query: 747 LTLLNIFKFYEKQENKKQFCHKYFFNYKVLKRAAELKNQMILLLKKSSIPLVTSPRNTNA 806
+ L I+ +++ Q+C++ + + +KRA ++++Q+ LL++ I + ++ ++
Sbjct: 884 IAFLKIYNSWKETNYSTQWCYENYIQVRSMKRARDIRDQLEGLLERVEIDVSSNANELDS 943
Query: 807 VLKCLTNGFFSNAAYLHYSGVYRTVRGNEDLYIHPSSVL 845
+ K + GFF + A L +G YRTV+ + ++IHP+S L
Sbjct: 944 IRKSIVAGFFPHTAKLQKNGSYRTVKHPQTVHIHPASGL 982
Score = 94 (38.1 bits), Expect = 1.0e-51, Sum P(3) = 1.0e-51
Identities = 19/46 (41%), Positives = 30/46 (65%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILMECSRKFSR 46
MT+G+L+ +P + YSVI++D+ HERT+ TDIL + +R
Sbjct: 500 MTDGMLLRELLGEPDLGSYSVIIVDEAHERTLRTDILFGLVKDIAR 545
Score = 43 (20.2 bits), Expect = 1.8e-11, Sum P(2) = 1.8e-11
Identities = 9/19 (47%), Positives = 12/19 (63%)
Query: 434 IIGILKQYHNQREDLKLLI 452
+ G++K R DLKLLI
Sbjct: 536 LFGLVKDIARARPDLKLLI 554
Score = 38 (18.4 bits), Expect = 2.0e-34, Sum P(3) = 2.0e-34
Identities = 6/22 (27%), Positives = 12/22 (54%)
Query: 576 VMFHKVFFSFFQYLLEAGWCYD 597
+ F K++ S+ + WCY+
Sbjct: 884 IAFLKIYNSWKETNYSTQWCYE 905
Score = 37 (18.1 bits), Expect = 8.7e-16, Sum P(3) = 8.7e-16
Identities = 8/23 (34%), Positives = 13/23 (56%)
Query: 137 VLLSSGSVLDSAVEILLHRLRGL 159
V L +++ E L H++RGL
Sbjct: 617 VFLPGQEEIEAVEENLKHKIRGL 639
>UNIPROTKB|F1MWZ4 [details] [associations]
symbol:F1MWZ4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045943 "positive regulation of transcription from RNA
polymerase I promoter" evidence=IEA] [GO:0033613 "activating
transcription factor binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA] [GO:0000182
"rDNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005654 GO:GO:0005730
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GO:GO:0000182 GO:GO:0045943
GeneTree:ENSGT00700000104241 OMA:APDYFRR EMBL:DAAA02048722
IPI:IPI00693412 Ensembl:ENSBTAT00000016932 Uniprot:F1MWZ4
Length = 714
Score = 331 (121.6 bits), Expect = 2.2e-51, Sum P(3) = 2.2e-51
Identities = 71/198 (35%), Positives = 119/198 (60%)
Query: 330 DVIGEDMKAFAEQLKPLKRTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPV 389
DV+ +KA ++ K L + LK+++ SAT+D + Q++N A +L ++G +P+
Sbjct: 211 DVLFGVVKAAQKRRKELGKLPLKVLVMSATMDVDLFSQYFN-----GAPVLYLEGRQHPI 265
Query: 390 SVYYSNDPVVNYVQGVVDTAIKIHESMPVG-DILAFVIGLEQIEHIIGILKQYHNQRED- 447
++Y+ P +Y+ + + +IH+ P DIL F+ G E+IE + + D
Sbjct: 266 QIFYTKQPQHDYLHAALVSVFQIHQEAPSSHDILVFLTGQEEIEAMSKTCRDIAKHLPDG 325
Query: 448 -LKLLILPMHGSLPNNEQIKVFRPTPRAMRKIVIATNIAETSITIPGIVYVIDPGFVKAR 506
+L+LP++ SLP +Q++VF+ P+ RK++I+TNIAETSITI GI YV+D G VKA+
Sbjct: 326 CPSMLVLPLYASLPYAQQLRVFQRAPKGYRKVIISTNIAETSITITGIKYVVDTGMVKAK 385
Query: 507 WFNPNTLTNSLVVVPISK 524
+NP++ L V +SK
Sbjct: 386 KYNPDSGLEVLAVQRVSK 403
Score = 312 (114.9 bits), Expect = 2.3e-24, P = 2.3e-24
Identities = 69/149 (46%), Positives = 102/149 (68%)
Query: 587 QYLLEAGWCYDTKLIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTK 646
QYL E G +I +T+PRR++ SLA RVS+E RT LG VGYT+RFDD T++D TK
Sbjct: 116 QYLYEGGIGRQA-IIAVTQPRRVAAISLATRVSDEKRTELGKLVGYTVRFDDVTSDD-TK 173
Query: 647 IKYMTEGILMREMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKILKDKERDFECSDE 706
IK++T+G+L+RE ++D LLRKYS I+LDE HERT+ TD+L G++K K ++ + +
Sbjct: 174 IKFLTDGMLLREAISDCLLRKYSCIILDEAHERTLHTDVLFGVVKAAQKRRKELGKLPLK 233
Query: 707 IASILSLLQVQDIFIKPSSGA--LSLKAR 733
+ + + + V D+F + +GA L L+ R
Sbjct: 234 VLVMSATMDV-DLFSQYFNGAPVLYLEGR 261
Score = 239 (89.2 bits), Expect = 2.2e-51, Sum P(3) = 2.2e-51
Identities = 51/153 (33%), Positives = 90/153 (58%)
Query: 701 FECSDEIASILSLLQVQDIFIKPSSGALSLKARVLRRNFEVEQGDLLTLLNIFKFYEKQE 760
F C++EI +I++LL V I P S +++ +R+ F +GD LTLLN+++ ++
Sbjct: 523 FHCTEEILTIVALLSVDSILYNPPSRRDEVQS--VRKKFVSSEGDHLTLLNVYRTFKNTG 580
Query: 761 NKKQFCHKYFFNYKVLKRAAELKNQMILLLKKSSIPLVTSPRNTNAVLKCLTNGFFSNAA 820
K++C + F N K + AE++ Q+ + K S+P+V+S +T ++ +CL + F++ A
Sbjct: 581 GNKEWCKENFVNSKNMMLVAEVRAQLRDICIKMSMPIVSSRGDTESIRRCLAHSLFTSTA 640
Query: 821 YLHYSGVYRTVRGNEDLYIHPSSVLYTLQQPQC 853
L G Y T ++ + IHPSSVL+ + P C
Sbjct: 641 ELQPDGSYATTDTHQPVAIHPSSVLFHCK-PAC 672
Score = 184 (69.8 bits), Expect = 3.2e-35, Sum P(3) = 3.2e-35
Identities = 43/98 (43%), Positives = 59/98 (60%)
Query: 46 RLYTEASFSQLNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRVALELL 105
RLYTE F + + T PE+QR L+S +LQL A+ I N+L F F S P +++ A+ L
Sbjct: 423 RLYTEDEFEKFEKMTVPEIQRCNLASVMLQLLAMKIPNVLTFDFMSKPSPDHIQAAIAQL 482
Query: 106 YSLGAMDV-NGNLT-KPVGETMAEMPLHPIHAKVLLSS 141
LGA++ +G LT P+G MA PL P AK +L S
Sbjct: 483 ELLGALEHRDGQLTLTPMGRKMAAFPLEPKFAKTILLS 520
Score = 91 (37.1 bits), Expect = 2.2e-51, Sum P(3) = 2.2e-51
Identities = 17/37 (45%), Positives = 26/37 (70%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDIL 37
+T+G+L+ D + KYS I+LD+ HERT+ TD+L
Sbjct: 177 LTDGMLLREAISDCLLRKYSCIILDEAHERTLHTDVL 213
>TAIR|locus:2088847 [details] [associations]
symbol:AT3G26560 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA;ISS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0009506
"plasmodesma" evidence=IDA] [GO:0000226 "microtubule cytoskeleton
organization" evidence=RCA] [GO:0000911 "cytokinesis by cell plate
formation" evidence=RCA] [GO:0006486 "protein glycosylation"
evidence=RCA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005829 GO:GO:0005739 GO:GO:0009506 GO:GO:0005524
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0008380
GO:GO:0006397 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316 EMBL:X98130
EMBL:X97970 EMBL:AB028611 IPI:IPI00530246 RefSeq:NP_189288.1
UniGene:At.46918 ProteinModelPortal:Q38953 SMR:Q38953 STRING:Q38953
PaxDb:Q38953 PRIDE:Q38953 EnsemblPlants:AT3G26560.1 GeneID:822264
KEGG:ath:AT3G26560 GeneFarm:1800 TAIR:At3g26560 InParanoid:Q38953
KO:K12818 OMA:NAWCYEN PhylomeDB:Q38953 ProtClustDB:CLSN2684863
Genevestigator:Q38953 GermOnline:AT3G26560 Uniprot:Q38953
Length = 1168
Score = 346 (126.9 bits), Expect = 2.3e-51, Sum P(3) = 2.3e-51
Identities = 72/186 (38%), Positives = 115/186 (61%)
Query: 343 LKPL--KRTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYYSNDPVVN 400
LK L +R L+LI++SAT+DAE+ ++ N I ++ G +PV + Y+ P +
Sbjct: 651 LKKLMKRRLDLRLIVTSATLDAEKFSGYF-----FNCNIFTIPGRTFPVEILYTKQPETD 705
Query: 401 YVQGVVDTAIKIHESMPVGDILAFVIGLEQIEHII-GILKQYHNQREDL-KLLILPMHGS 458
Y+ + T ++IH + P GDIL F+ G E+I+ + ++ +++ +L+ILP++ +
Sbjct: 706 YLDAALITVLQIHLTEPEGDILVFLTGQEEIDSACQSLYERMKGLGKNVPELIILPVYSA 765
Query: 459 LPNNEQIKVFRPTPRAMRKIVIATNIAETSITIPGIVYVIDPGFVKARWFNPNTLTNSLV 518
LP+ Q ++F P P RK+V+ATNIAE S+TI GI YV+DPGF K +NP SLV
Sbjct: 766 LPSEMQSRIFDPPPPGKRKVVVATNIAEASLTIDGIYYVVDPGFAKQNVYNPKQGLESLV 825
Query: 519 VVPISK 524
+ PIS+
Sbjct: 826 ITPISQ 831
Score = 320 (117.7 bits), Expect = 1.6e-42, Sum P(2) = 1.6e-42
Identities = 67/110 (60%), Positives = 82/110 (74%)
Query: 587 QYLLEAGWCYDTK-LIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVT 645
QYL EAG Y TK IG T+PRR++ S+A RV+EE LG VGY IRF+DCT D T
Sbjct: 550 QYLAEAG--YTTKGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPD-T 606
Query: 646 KIKYMTEGILMREMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKILK 695
IKYMT+G+L+RE++ D L +YSVIMLDE HERTI TD+L GLLKK++K
Sbjct: 607 VIKYMTDGMLLREILIDENLSQYSVIMLDEAHERTIHTDVLFGLLKKLMK 656
Score = 221 (82.9 bits), Expect = 2.3e-51, Sum P(3) = 2.3e-51
Identities = 48/152 (31%), Positives = 87/152 (57%)
Query: 700 DFECSDEIASILSLLQVQDIFIKPSSGALSLKARVLRRNFEVEQGDLLTLLNIFKFYEKQ 759
D CSDEI ++++++Q +IF +P +A R F +GD LTLL +++ ++ +
Sbjct: 948 DLGCSDEILTMIAMIQTGNIFYRPREK--QAQADQKRAKFFQPEGDHLTLLAVYEAWKAK 1005
Query: 760 ENKKQFCHKYFFNYKVLKRAAELKNQMILLLKKSSIPLVTSPRNTNAVLKCLTNGFFSNA 819
+C + F + L+RA +++ Q++ ++ K + +VT+ +N + K +T GFF +
Sbjct: 1006 NFSGPWCFENFIQSRSLRRAQDVRKQLLSIMDKYKLDVVTAGKNFTKIRKAITAGFFFHG 1065
Query: 820 AYLHYSGVYRTVRGNEDLYIHPSSVLYTLQQP 851
A YRT+ N+ +YIHPSS L+ +QP
Sbjct: 1066 ARKDPQEGYRTLVENQPVYIHPSSALFQ-RQP 1096
Score = 210 (79.0 bits), Expect = 2.0e-36, Sum P(3) = 2.0e-36
Identities = 54/113 (47%), Positives = 70/113 (61%)
Query: 43 KFSRLYTEASFSQLNECTP---PEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLR 99
K RLYTE+++ NE P PE+QR L L +KA+GI+++L F F PP Q L
Sbjct: 848 KCYRLYTESAYR--NEMPPTSIPEIQRINLGMTTLTMKAMGINDLLSFDFMDPPQPQALI 905
Query: 100 VALELLYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLLSSGSVLDSAVEIL 152
A+E LYSLGA+D G LTK +G MAE PL P +K+LL+S L + EIL
Sbjct: 906 SAMEQLYSLGALDEEGLLTK-LGRKMAEFPLEPPLSKMLLASVD-LGCSDEIL 956
Score = 105 (42.0 bits), Expect = 2.3e-51, Sum P(3) = 2.3e-51
Identities = 21/46 (45%), Positives = 31/46 (67%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILMECSRKFSR 46
MT+G+L+ D ++ +YSVIMLD+ HERTI TD+L +K +
Sbjct: 611 MTDGMLLREILIDENLSQYSVIMLDEAHERTIHTDVLFGLLKKLMK 656
Score = 53 (23.7 bits), Expect = 3.3e-14, Sum P(2) = 3.3e-14
Identities = 16/61 (26%), Positives = 32/61 (52%)
Query: 396 DPVVNYV-QGVVDTAIKIHESMPVGDILAFVIGLEQIEH---IIGILKQYHNQREDLKLL 451
D V+ Y+ G++ I I E++ ++ E+ H + G+LK+ +R DL+L+
Sbjct: 605 DTVIKYMTDGMLLREILIDENLSQYSVIMLDEAHERTIHTDVLFGLLKKLMKRRLDLRLI 664
Query: 452 I 452
+
Sbjct: 665 V 665
Score = 48 (22.0 bits), Expect = 1.1e-19, Sum P(3) = 1.1e-19
Identities = 11/27 (40%), Positives = 16/27 (59%)
Query: 137 VLLSSGSVLDSAVEILLHRLRGLCDNV 163
V L+ +DSA + L R++GL NV
Sbjct: 728 VFLTGQEEIDSACQSLYERMKGLGKNV 754
Score = 40 (19.1 bits), Expect = 1.4e-44, Sum P(3) = 1.4e-44
Identities = 13/64 (20%), Positives = 29/64 (45%)
Query: 46 RLYTEASFS-QLNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRVALEL 104
RL E ++ + +CT P+ ++ +L + L N+ ++S A + ++
Sbjct: 587 RLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDENLSQYSVIMLDEAHERTIHTDV 646
Query: 105 LYSL 108
L+ L
Sbjct: 647 LFGL 650
>SGD|S000003088 [details] [associations]
symbol:PRP43 "RNA helicase in the DEAH-box family"
species:4932 "Saccharomyces cerevisiae" [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=IMP;IDA] [GO:0000390 "spliceosomal
complex disassembly" evidence=IGI;IDA] [GO:0030490 "maturation of
SSU-rRNA" evidence=IGI] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0030686 "90S preribosome" evidence=IDA] [GO:0071014 "post-mRNA
release spliceosomal complex" evidence=IMP] [GO:0006364 "rRNA
processing" evidence=IMP] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0042273 "ribosomal large subunit biogenesis" evidence=IMP]
[GO:0000462 "maturation of SSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0000463 "maturation of LSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 SGD:S000003088
GO:GO:0005739 GO:GO:0005524 EMBL:BK006941 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0030686
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0000463
GO:GO:0004004 HOGENOM:HOG000175261 GO:GO:0000390 GO:GO:0000466
GO:GO:0000462 KO:K12820 GeneTree:ENSGT00650000093246 OMA:TVLQIHA
OrthoDB:EOG4S7NZ4 GO:GO:0071014 EMBL:U41851 EMBL:Z72642 PIR:S64130
RefSeq:NP_011395.1 PDB:2XAU PDB:3KX2 PDBsum:2XAU PDBsum:3KX2
ProteinModelPortal:P53131 SMR:P53131 DIP:DIP-5152N IntAct:P53131
MINT:MINT-497996 STRING:P53131 PaxDb:P53131 PeptideAtlas:P53131
PRIDE:P53131 EnsemblFungi:YGL120C GeneID:852757 KEGG:sce:YGL120C
CYGD:YGL120c EvolutionaryTrace:P53131 NextBio:972201
Genevestigator:P53131 GermOnline:YGL120C Uniprot:P53131
Length = 767
Score = 353 (129.3 bits), Expect = 2.8e-51, Sum P(3) = 2.8e-51
Identities = 79/187 (42%), Positives = 119/187 (63%)
Query: 347 KRTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYYSNDPVVNYVQGVV 406
+R LK+II SAT+DAE+ +++N +A +L+V G YPV +YY+ + +Y+ +
Sbjct: 237 RRPDLKIIIMSATLDAEKFQRYFN-----DAPLLAVPGRTYPVELYYTPEFQRDYLDSAI 291
Query: 407 DTAIKIHESMPVGDILAFVIGLEQIEHIIGILKQYHNQ--REDL--KLLILPMHGSLPNN 462
T ++IH + GDIL F+ G ++IE + + +Q RE+ L + P++GSLP +
Sbjct: 292 RTVLQIHATEEAGDILLFLTGEDEIEDAVRKISLEGDQLVREEGCGPLSVYPLYGSLPPH 351
Query: 463 EQIKVFRPTP-----RAMRKIVIATNIAETSITIPGIVYVIDPGFVKARWFNPNTLTNSL 517
+Q ++F P P R RK+VI+TNIAETS+TI GIVYV+DPGF K + +NP SL
Sbjct: 352 QQQRIFEPAPESHNGRPGRKVVISTNIAETSLTIDGIVYVVDPGFSKQKVYNPRIRVESL 411
Query: 518 VVVPISK 524
+V PISK
Sbjct: 412 LVSPISK 418
Score = 261 (96.9 bits), Expect = 4.3e-35, Sum P(2) = 4.3e-35
Identities = 51/95 (53%), Positives = 72/95 (75%)
Query: 601 IGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTKIKYMTEGILMREMM 660
+ T+PRR++ S+A RV+EE+ LG VGY+IRF++ T + T +KYMT+G+L+RE M
Sbjct: 143 VACTQPRRVAAMSVAQRVAEEMDVKLGEEVGYSIRFEN-KTSNKTILKYMTDGMLLREAM 201
Query: 661 TDPLLRKYSVIMLDEVHERTIFTDILMGLLKKILK 695
D L +YS I+LDE HERT+ TDILMGLLK+++K
Sbjct: 202 EDHDLSRYSCIILDEAHERTLATDILMGLLKQVVK 236
Score = 206 (77.6 bits), Expect = 2.8e-51, Sum P(3) = 2.8e-51
Identities = 50/156 (32%), Positives = 89/156 (57%)
Query: 700 DFECSDEIASILSLLQVQDIFIKPSSGALSLKARVLRRNFEVEQGDLLTLLNIFKFYEKQ 759
+F+CS EI +I+++L V ++FI+P+ +A + F GD +TLLN++ ++
Sbjct: 535 EFQCSQEILTIVAMLSVPNVFIRPTKD--KKRADDAKNIFAHPDGDHITLLNVYHAFKSD 592
Query: 760 ENKK----QFCHKYFFNYKVLKRAAELKNQMILLLKKSSIPLVT----SPRNTNAVLKCL 811
E + ++C ++ NY+ L A +++Q+ L+ + ++ L T SP+ + + K L
Sbjct: 593 EAYEYGIHKWCRDHYLNYRSLSAADNIRSQLERLMNRYNLELNTTDYESPKYFDNIRKAL 652
Query: 812 TNGFFSNAAYLHYSGV--YRTVRGNEDLYIHPSSVL 845
+GFF A SG Y TV+ N+D+ IHPS+VL
Sbjct: 653 ASGFFMQVAKKR-SGAKGYITVKDNQDVLIHPSTVL 687
Score = 187 (70.9 bits), Expect = 9.2e-33, Sum P(3) = 9.2e-33
Identities = 44/100 (44%), Positives = 62/100 (62%)
Query: 43 KFSRLYTEASFS-QLNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRVA 101
K RLYTE +F +L E + PE+ R+ LSS VL+LK LGI +++ F F PP + + A
Sbjct: 435 KCFRLYTEEAFQKELIEQSYPEILRSNLSSTVLELKKLGIDDLVHFDFMDPPAPETMMRA 494
Query: 102 LELLYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLLSS 141
LE L L +D GNLT P+G ++ PL P+ A +L+ S
Sbjct: 495 LEELNYLACLDDEGNLT-PLGRLASQFPLDPMLAVMLIGS 533
Score = 101 (40.6 bits), Expect = 2.8e-51, Sum P(3) = 2.8e-51
Identities = 22/40 (55%), Positives = 30/40 (75%)
Query: 1 MTEGILIEN--DDHDPSVEKYSVIMLDKVHERTIFTDILM 38
MT+G+L+ +DHD S +YS I+LD+ HERT+ TDILM
Sbjct: 191 MTDGMLLREAMEDHDLS--RYSCIILDEAHERTLATDILM 228
Score = 52 (23.4 bits), Expect = 8.0e-19, Sum P(3) = 8.0e-19
Identities = 13/39 (33%), Positives = 22/39 (56%)
Query: 434 IIGILKQYHNQREDLKLLILPMHGSLPNNEQIKVFRPTP 472
++G+LKQ +R DLK++I M +L + + F P
Sbjct: 227 LMGLLKQVVKRRPDLKIII--MSATLDAEKFQRYFNDAP 263
>UNIPROTKB|I3L1L6 [details] [associations]
symbol:DHX33 "Putative ATP-dependent RNA helicase DHX33"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AC004148 HGNC:HGNC:16718 ChiTaRS:DHX33
Ensembl:ENST00000572490 Uniprot:I3L1L6
Length = 617
Score = 333 (122.3 bits), Expect = 2.8e-51, Sum P(3) = 2.8e-51
Identities = 73/198 (36%), Positives = 119/198 (60%)
Query: 330 DVIGEDMKAFAEQLKPLKRTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPV 389
DV+ +KA ++ K L + LK+I+ SAT+D + Q++N A +L ++G +P+
Sbjct: 114 DVLFGVVKAAQKRRKELGKLPLKVIVMSATMDVDLFSQYFN-----GAPVLYLEGRQHPI 168
Query: 390 SVYYSNDPVVNYVQGVVDTAIKIHESMPVG-DILAFVIGLEQIEHIIGILKQYHNQRED- 447
V+Y+ P +Y+ + + +IH+ P DIL F+ G E+IE + + D
Sbjct: 169 QVFYTKQPQNDYLHAALVSVFQIHQEAPSSQDILVFLTGQEEIEAMSKTCRDIAKHLPDG 228
Query: 448 -LKLLILPMHGSLPNNEQIKVFRPTPRAMRKIVIATNIAETSITIPGIVYVIDPGFVKAR 506
+L+LP++ SLP +Q++VF+ P+ RK++I+TNIAETSITI GI YV+D G VKA+
Sbjct: 229 CPAMLVLPLYASLPYAQQLRVFQGAPKGYRKVIISTNIAETSITITGIKYVVDTGMVKAK 288
Query: 507 WFNPNTLTNSLVVVPISK 524
+NP++ L V +SK
Sbjct: 289 KYNPDSGLEVLAVQRVSK 306
Score = 237 (88.5 bits), Expect = 2.6e-16, P = 2.6e-16
Identities = 56/147 (38%), Positives = 92/147 (62%)
Query: 619 SEELRTTLGHTVGYTIRFDDCTTEDVTKIKYMTEGILMREMMTDPLLRKYSVIMLDEVHE 678
S E TT +VGYT+RFDD T+ED T+IK++T+G+L+RE ++D LLRKYS ++LDE HE
Sbjct: 50 SSETWTTRSSSVGYTVRFDDVTSED-TRIKFLTDGMLLREAISDSLLRKYSCVILDEAHE 108
Query: 679 RTIFTDILMGLLKKILKDKERDFECSDEIASILSLLQVQDIFIKPSSGALSLKARVLRRN 738
RTI TD+L G++K K ++ + ++ + + + V D+F + +GA L +
Sbjct: 109 RTIHTDVLFGVVKAAQKRRKELGKLPLKVIVMSATMDV-DLFSQYFNGAPVLYLEGRQHP 167
Query: 739 FEV-----EQGDLL--TLLNIFKFYEK 758
+V Q D L L+++F+ +++
Sbjct: 168 IQVFYTKQPQNDYLHAALVSVFQIHQE 194
Score = 227 (85.0 bits), Expect = 2.8e-51, Sum P(3) = 2.8e-51
Identities = 50/153 (32%), Positives = 85/153 (55%)
Query: 701 FECSDEIASILSLLQVQDIFIKPSSGALSLKARVLRRNFEVEQGDLLTLLNIFKFYEKQE 760
F C++EI +I+SLL V + P S ++ +R+ F +GD +TLLNI++ ++
Sbjct: 426 FHCTEEILTIVSLLSVDSVLHNPPSRREEVQG--VRKKFISSEGDHMTLLNIYRTFKNLG 483
Query: 761 NKKQFCHKYFFNYKVLKRAAELKNQMILLLKKSSIPLVTSPRNTNAVLKCLTNGFFSNAA 820
K +C + F N K + AE++ Q+ + K S+P+ +S + +V +CL + F + A
Sbjct: 484 GNKDWCKENFVNSKNMTLVAEVRAQLRDICLKMSMPIASSRGDVESVRRCLAHSLFMSTA 543
Query: 821 YLHYSGVYRTVRGNEDLYIHPSSVLYTLQQPQC 853
L G Y T ++ + IHPSSVL+ + P C
Sbjct: 544 ELQPDGTYATTDTHQPVAIHPSSVLFHCK-PAC 575
Score = 178 (67.7 bits), Expect = 6.3e-34, Sum P(3) = 6.3e-34
Identities = 41/98 (41%), Positives = 59/98 (60%)
Query: 46 RLYTEASFSQLNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRVALELL 105
RLYTE F + ++ T PE+QR L+S +LQL A+ + N+L F F S P +++ A+ L
Sbjct: 326 RLYTEDEFEKFDKMTVPEIQRCNLASVMLQLLAMKVPNVLTFDFMSKPSPDHIQAAIAQL 385
Query: 106 YSLGAMD-VNGNLT-KPVGETMAEMPLHPIHAKVLLSS 141
LGA++ + LT P+G MA PL P AK +L S
Sbjct: 386 DLLGALEHKDDQLTLTPMGRKMAAFPLEPKFAKTILMS 423
Score = 94 (38.1 bits), Expect = 2.8e-51, Sum P(3) = 2.8e-51
Identities = 17/37 (45%), Positives = 26/37 (70%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDIL 37
+T+G+L+ D + KYS ++LD+ HERTI TD+L
Sbjct: 80 LTDGMLLREAISDSLLRKYSCVILDEAHERTIHTDVL 116
>MGI|MGI:2445102 [details] [associations]
symbol:Dhx33 "DEAH (Asp-Glu-Ala-His) box polypeptide 33"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000182 "rDNA binding" evidence=ISO;IDA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005654
"nucleoplasm" evidence=ISO;IDA] [GO:0005730 "nucleolus"
evidence=ISO;IDA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0033613 "activating transcription factor binding" evidence=IPI]
[GO:0045943 "positive regulation of transcription from RNA
polymerase I promoter" evidence=ISO;IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 MGI:MGI:2445102
GO:GO:0005524 GO:GO:0005654 GO:GO:0005730 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 GO:GO:0000182
GO:GO:0045943 HOVERGEN:HBG039428 GeneTree:ENSGT00700000104241
CTD:56919 OMA:APDYFRR ChiTaRS:DHX33 EMBL:AK035177 EMBL:BC052172
IPI:IPI00410764 RefSeq:NP_848144.3 UniGene:Mm.35399
ProteinModelPortal:Q80VY9 SMR:Q80VY9 PhosphoSite:Q80VY9
PRIDE:Q80VY9 Ensembl:ENSMUST00000108527 GeneID:216877
KEGG:mmu:216877 InParanoid:Q80VY9 NextBio:375442 Bgee:Q80VY9
CleanEx:MM_DHX33 Genevestigator:Q80VY9
GermOnline:ENSMUSG00000040620 Uniprot:Q80VY9
Length = 698
Score = 335 (123.0 bits), Expect = 3.3e-51, Sum P(3) = 3.3e-51
Identities = 71/198 (35%), Positives = 119/198 (60%)
Query: 330 DVIGEDMKAFAEQLKPLKRTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPV 389
DV+ +K ++ K L + LK+I+ SAT+D + Q++N A +L ++G +P+
Sbjct: 195 DVLFGVVKTAQKRRKELGKLPLKVIVMSATMDVDLFSQYFN-----RAPVLYLEGRQHPI 249
Query: 390 SVYYSNDPVVNYVQGVVDTAIKIHESMPVG-DILAFVIGLEQIEHIIGILKQYHNQRED- 447
++Y+ P +Y+ + + +IH+ P DIL F+ G E+IE + + D
Sbjct: 250 QIFYTKQPQQDYLHAALVSVFQIHQEAPASQDILVFLTGQEEIEAMSKTCRDIARHLPDG 309
Query: 448 -LKLLILPMHGSLPNNEQIKVFRPTPRAMRKIVIATNIAETSITIPGIVYVIDPGFVKAR 506
+L+LP++ SLP ++Q++VF+ P+ RK++I+TNIAETSITI GI YV+D G VKA+
Sbjct: 310 CPSMLVLPLYASLPYSQQLRVFQGAPKGYRKVIISTNIAETSITITGIKYVVDTGMVKAK 369
Query: 507 WFNPNTLTNSLVVVPISK 524
+NP++ L V +SK
Sbjct: 370 KYNPDSGLEVLAVQRVSK 387
Score = 306 (112.8 bits), Expect = 1.1e-42, Sum P(2) = 1.1e-42
Identities = 60/112 (53%), Positives = 84/112 (75%)
Query: 587 QYLLEAGWCYDTKLIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTK 646
QYL E G +I +T+PRR++ SLA RVS+E RT LG VGYT+RF+D T+ED T+
Sbjct: 100 QYLYEGGISRQG-IIAVTQPRRVAAISLATRVSDEKRTELGKLVGYTVRFEDVTSED-TR 157
Query: 647 IKYMTEGILMREMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKILKDKE 698
IK++T+G+L+RE ++D LLRKYS ++LDE HERTI TD+L G++K K ++
Sbjct: 158 IKFLTDGMLLREAISDSLLRKYSCVILDEAHERTIHTDVLFGVVKTAQKRRK 209
Score = 229 (85.7 bits), Expect = 3.3e-51, Sum P(3) = 3.3e-51
Identities = 49/153 (32%), Positives = 87/153 (56%)
Query: 701 FECSDEIASILSLLQVQDIFIKPSSGALSLKARVLRRNFEVEQGDLLTLLNIFKFYEKQE 760
F C++EI +I+SLL V + P + +++ +R+ F +GD +TLLNI++ ++
Sbjct: 507 FHCTEEILTIVSLLSVDSVLYNPPARRDEVQS--VRKKFISSEGDHITLLNIYRTFKNIG 564
Query: 761 NKKQFCHKYFFNYKVLKRAAELKNQMILLLKKSSIPLVTSPRNTNAVLKCLTNGFFSNAA 820
K +C + F N K + AE++ Q+ + K S+P+++S + +V +C+ + F N A
Sbjct: 565 GNKDWCKENFVNSKNMLLVAEVRAQLREICLKMSMPIMSSRGDMESVRRCMAHSLFMNTA 624
Query: 821 YLHYSGVYRTVRGNEDLYIHPSSVLYTLQQPQC 853
L G Y T ++ + IHPSSVL+ + P C
Sbjct: 625 ELQTDGTYATTDTHQPVAIHPSSVLFHCK-PAC 656
Score = 181 (68.8 bits), Expect = 3.6e-34, Sum P(3) = 3.6e-34
Identities = 43/99 (43%), Positives = 59/99 (59%)
Query: 46 RLYTEASFSQLNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRVALELL 105
RLYTE F + + T PE+QR L+S +LQL A+ + N+L F F S P ++ A+ L
Sbjct: 407 RLYTEDEFEKFEKMTVPEIQRCNLASVILQLLAMKVPNVLTFDFMSKPSPDHIEAAIAQL 466
Query: 106 YSLGAMD-VNGNLT-KPVGETMAEMPLHPIHAK-VLLSS 141
LGA++ + LT P+G MA PL P AK +LLSS
Sbjct: 467 DLLGALEHKDDQLTLTPIGRKMAAFPLEPRFAKTILLSS 505
Score = 94 (38.1 bits), Expect = 3.3e-51, Sum P(3) = 3.3e-51
Identities = 17/37 (45%), Positives = 26/37 (70%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDIL 37
+T+G+L+ D + KYS ++LD+ HERTI TD+L
Sbjct: 161 LTDGMLLREAISDSLLRKYSCVILDEAHERTIHTDVL 197
Score = 39 (18.8 bits), Expect = 9.2e-23, Sum P(2) = 9.2e-23
Identities = 8/17 (47%), Positives = 11/17 (64%)
Query: 840 HPSSVLYTLQQPQCTHL 856
HP + YT +QPQ +L
Sbjct: 247 HPIQIFYT-KQPQQDYL 262
>CGD|CAL0002409 [details] [associations]
symbol:orf19.5865 species:5476 "Candida albicans" [GO:0071006
"U2-type catalytic step 1 spliceosome" evidence=IEA] [GO:0000349
"generation of catalytic spliceosome for first transesterification
step" evidence=IEA] [GO:0008186 "RNA-dependent ATPase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
CGD:CAL0002409 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AACQ01000003 EMBL:AACQ01000004
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
KO:K12814 RefSeq:XP_722935.1 RefSeq:XP_723081.1 GeneID:3635187
GeneID:3635307 KEGG:cal:CaO19.13287 KEGG:cal:CaO19.5865
Uniprot:Q5ANN5
Length = 865
Score = 390 (142.3 bits), Expect = 7.5e-51, Sum P(3) = 7.5e-51
Identities = 82/181 (45%), Positives = 119/181 (65%)
Query: 347 KRTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYYSNDPVVNYVQGVV 406
++ LK+II+SAT++AE+ QF+N NA IL++ G +PV ++Y+ P NY+Q +
Sbjct: 375 RKDDLKIIIASATINAEKFSQFFN-----NAPILNIPGRRFPVKIHYTKQPEANYIQAAI 429
Query: 407 DTAIKIHESMPV-GDILAFVIGLEQIEHIIGILKQYHNQREDL--KLLILPMHGSLPNNE 463
T +IH + P+ GDIL F+ G ++IE + IL+ + D +++ ++ +LP
Sbjct: 430 TTIFQIHMTQPLPGDILVFLTGQDEIETMEEILRDSILKLGDQIDPMIVCSIYANLPQEL 489
Query: 464 QIKVFRPTPRAMRKIVIATNIAETSITIPGIVYVIDPGFVKARWFNPNTLTNSLVVVPIS 523
Q K+F+PTP RKIV+ATNIAETSITI GI YVIDPG+VK +NP T SLVVVP S
Sbjct: 490 QQKIFQPTPSNTRKIVLATNIAETSITIDGISYVIDPGYVKQNVYNPTTGMESLVVVPCS 549
Query: 524 K 524
+
Sbjct: 550 R 550
Score = 316 (116.3 bits), Expect = 1.2e-36, Sum P(2) = 1.2e-36
Identities = 59/114 (51%), Positives = 83/114 (72%)
Query: 587 QYLLEAGWCYDTKLIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTK 646
QYL EAG+ + ++I T+PRR++ TS+ANRV+ E++ LG VGY IRFDD + VT
Sbjct: 264 QYLHEAGYSRNNQVIACTQPRRVAATSVANRVANEMQVKLGEQVGYNIRFDDNCKDGVTV 323
Query: 647 IKYMTEGILMREMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKILKDKERD 700
IKY+T+G+L+RE + DP L KYS IM+DE HERT+ T+IL+ LLK ++ +D
Sbjct: 324 IKYVTDGMLLREFLQDPTLGKYSAIMIDEAHERTLSTEILLSLLKDVMMTTRKD 377
Score = 205 (77.2 bits), Expect = 3.9e-30, Sum P(3) = 3.9e-30
Identities = 46/111 (41%), Positives = 71/111 (63%)
Query: 43 KFSRLYTEASF-SQLNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRVA 101
K RL+T+ SF ++L+ PE+QR L+S +L L +LGI+++L F F PP + + A
Sbjct: 567 KCFRLFTKWSFYNELDSNQQPEIQRVNLTSVILLLLSLGINDLLGFEFMDPPSKEAIIKA 626
Query: 102 LELLYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLLSSGSVLDSAVEIL 152
L LLY+LGA++ G LTK G+ M+E PL P+ K +L+S D+ +I+
Sbjct: 627 LNLLYALGALNTQGKLTK-TGKKMSEFPLDPVFTKCILTSDK-FDNTKQII 675
Score = 165 (63.1 bits), Expect = 7.5e-51, Sum P(3) = 7.5e-51
Identities = 55/173 (31%), Positives = 87/173 (50%)
Query: 701 FECSDEIASILSLL-QVQDIFIKPSSGALSLKARVLRRNFEVEQGDLLTLLNIFKFYEKQ 759
F+ + +I SI+++L + ++F +P R ++ F QGD LL I++ +
Sbjct: 668 FDNTKQIISIIAMLNESSNLFYRPKDKKELADKR--KQEFNDLQGDQFMLLKIWQQWVDS 725
Query: 760 ENKKQFCHKYFFNYKVLKRAAELKNQMILLLKKSSIPLVTSPR-------NT--NAVL-K 809
Q+C YF YK +KR + Q+I L KK I + + + NT N +L K
Sbjct: 726 GYSVQWCQDYFIQYKTMKRIKNIYEQLIRLSKKIGIEVNSRHQHRDHLQENTDNNTLLTK 785
Query: 810 CLTNGFFSNAAYLHYSG-VYRTV---RG--NEDLYIHPSSVLYTLQQPQCTHL 856
CL +GFF+N L G Y+ + +G N YIHPSS +Y L+ P+ +L
Sbjct: 786 CLISGFFNNIVKLSPMGDCYQKLTNGKGGNNTPCYIHPSSCIYKLK-PKPKYL 837
Score = 101 (40.6 bits), Expect = 7.5e-51, Sum P(3) = 7.5e-51
Identities = 18/38 (47%), Positives = 29/38 (76%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILM 38
+T+G+L+ DP++ KYS IM+D+ HERT+ T+IL+
Sbjct: 327 VTDGMLLREFLQDPTLGKYSAIMIDEAHERTLSTEILL 364
Score = 38 (18.4 bits), Expect = 9.6e-13, Sum P(3) = 9.6e-13
Identities = 15/60 (25%), Positives = 23/60 (38%)
Query: 229 PYQLRYIGQPEMGVGDKARPTIVRSSIDVACSCTVVEFLTEMGCRMDFEYISRGYMFRKG 288
P ++ Y QPE A TI + + ++ FLT E I R + + G
Sbjct: 411 PVKIHYTKQPEANYIQAAITTIFQIHMTQPLPGDILVFLTGQDEIETMEEILRDSILKLG 470
>UNIPROTKB|Q9H6R0 [details] [associations]
symbol:DHX33 "Putative ATP-dependent RNA helicase DHX33"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0033613 "activating transcription factor binding" evidence=IEA]
[GO:0045943 "positive regulation of transcription from RNA
polymerase I promoter" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005654 "nucleoplasm" evidence=IDA] [GO:0000182
"rDNA binding" evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 EMBL:CH471108 GO:GO:0005654
GO:GO:0005730 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 GO:GO:0000182 GO:GO:0045943 HOVERGEN:HBG039428
EMBL:AK025625 EMBL:AK026944 EMBL:AK295074 EMBL:AC004148
EMBL:BC030017 EMBL:CR936655 IPI:IPI00302860 IPI:IPI00655950
RefSeq:NP_001186628.1 RefSeq:NP_064547.2 UniGene:Hs.250456
ProteinModelPortal:Q9H6R0 SMR:Q9H6R0 IntAct:Q9H6R0
PhosphoSite:Q9H6R0 DMDM:296434478 PRIDE:Q9H6R0
Ensembl:ENST00000225296 GeneID:56919 KEGG:hsa:56919 UCSC:uc002gbz.3
CTD:56919 GeneCards:GC17M005360 HGNC:HGNC:16718 MIM:614405
neXtProt:NX_Q9H6R0 PharmGKB:PA27220 InParanoid:Q9H6R0 OMA:APDYFRR
OrthoDB:EOG46Q6S1 PhylomeDB:Q9H6R0 ChiTaRS:DHX33 GenomeRNAi:56919
NextBio:62420 ArrayExpress:Q9H6R0 Bgee:Q9H6R0 CleanEx:HS_DHX33
Genevestigator:Q9H6R0 GermOnline:ENSG00000005100 Uniprot:Q9H6R0
Length = 707
Score = 333 (122.3 bits), Expect = 1.0e-50, Sum P(3) = 1.0e-50
Identities = 73/198 (36%), Positives = 119/198 (60%)
Query: 330 DVIGEDMKAFAEQLKPLKRTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPV 389
DV+ +KA ++ K L + LK+I+ SAT+D + Q++N A +L ++G +P+
Sbjct: 204 DVLFGVVKAAQKRRKELGKLPLKVIVMSATMDVDLFSQYFN-----GAPVLYLEGRQHPI 258
Query: 390 SVYYSNDPVVNYVQGVVDTAIKIHESMPVG-DILAFVIGLEQIEHIIGILKQYHNQRED- 447
V+Y+ P +Y+ + + +IH+ P DIL F+ G E+IE + + D
Sbjct: 259 QVFYTKQPQNDYLHAALVSVFQIHQEAPSSQDILVFLTGQEEIEAMSKTCRDIAKHLPDG 318
Query: 448 -LKLLILPMHGSLPNNEQIKVFRPTPRAMRKIVIATNIAETSITIPGIVYVIDPGFVKAR 506
+L+LP++ SLP +Q++VF+ P+ RK++I+TNIAETSITI GI YV+D G VKA+
Sbjct: 319 CPAMLVLPLYASLPYAQQLRVFQGAPKGYRKVIISTNIAETSITITGIKYVVDTGMVKAK 378
Query: 507 WFNPNTLTNSLVVVPISK 524
+NP++ L V +SK
Sbjct: 379 KYNPDSGLEVLAVQRVSK 396
Score = 316 (116.3 bits), Expect = 8.3e-25, P = 8.3e-25
Identities = 73/179 (40%), Positives = 114/179 (63%)
Query: 587 QYLLEAGWCYDTKLIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTK 646
QYL E G +I +T+PRR++ SLA RVS+E RT LG VGYT+RFDD T+ED T+
Sbjct: 109 QYLYEGGISRQG-IIAVTQPRRVAAISLATRVSDEKRTELGKLVGYTVRFDDVTSED-TR 166
Query: 647 IKYMTEGILMREMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKILKDKERDFECSDE 706
IK++T+G+L+RE ++D LLRKYS ++LDE HERTI TD+L G++K K ++ + +
Sbjct: 167 IKFLTDGMLLREAISDSLLRKYSCVILDEAHERTIHTDVLFGVVKAAQKRRKELGKLPLK 226
Query: 707 IASILSLLQVQDIFIKPSSGALSLKARVLRRNFEV-----EQGDLL--TLLNIFKFYEK 758
+ + + + V D+F + +GA L + +V Q D L L+++F+ +++
Sbjct: 227 VIVMSATMDV-DLFSQYFNGAPVLYLEGRQHPIQVFYTKQPQNDYLHAALVSVFQIHQE 284
Score = 227 (85.0 bits), Expect = 1.0e-50, Sum P(3) = 1.0e-50
Identities = 50/153 (32%), Positives = 85/153 (55%)
Query: 701 FECSDEIASILSLLQVQDIFIKPSSGALSLKARVLRRNFEVEQGDLLTLLNIFKFYEKQE 760
F C++EI +I+SLL V + P S ++ +R+ F +GD +TLLNI++ ++
Sbjct: 516 FHCTEEILTIVSLLSVDSVLHNPPSRREEVQG--VRKKFISSEGDHMTLLNIYRTFKNLG 573
Query: 761 NKKQFCHKYFFNYKVLKRAAELKNQMILLLKKSSIPLVTSPRNTNAVLKCLTNGFFSNAA 820
K +C + F N K + AE++ Q+ + K S+P+ +S + +V +CL + F + A
Sbjct: 574 GNKDWCKENFVNSKNMTLVAEVRAQLRDICLKMSMPIASSRGDVESVRRCLAHSLFMSTA 633
Query: 821 YLHYSGVYRTVRGNEDLYIHPSSVLYTLQQPQC 853
L G Y T ++ + IHPSSVL+ + P C
Sbjct: 634 ELQPDGTYATTDTHQPVAIHPSSVLFHCK-PAC 665
Score = 178 (67.7 bits), Expect = 1.3e-33, Sum P(3) = 1.3e-33
Identities = 41/98 (41%), Positives = 59/98 (60%)
Query: 46 RLYTEASFSQLNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRVALELL 105
RLYTE F + ++ T PE+QR L+S +LQL A+ + N+L F F S P +++ A+ L
Sbjct: 416 RLYTEDEFEKFDKMTVPEIQRCNLASVMLQLLAMKVPNVLTFDFMSKPSPDHIQAAIAQL 475
Query: 106 YSLGAMD-VNGNLT-KPVGETMAEMPLHPIHAKVLLSS 141
LGA++ + LT P+G MA PL P AK +L S
Sbjct: 476 DLLGALEHKDDQLTLTPMGRKMAAFPLEPKFAKTILMS 513
Score = 94 (38.1 bits), Expect = 1.0e-50, Sum P(3) = 1.0e-50
Identities = 17/37 (45%), Positives = 26/37 (70%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDIL 37
+T+G+L+ D + KYS ++LD+ HERTI TD+L
Sbjct: 170 LTDGMLLREAISDSLLRKYSCVILDEAHERTIHTDVL 206
>DICTYBASE|DDB_G0291183 [details] [associations]
symbol:dhx8 "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA;ISS]
[GO:0006396 "RNA processing" evidence=ISS] [GO:0005681
"spliceosomal complex" evidence=IEA;ISS] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISS] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
dictyBase:DDB_G0291183 GO:GO:0005524 GO:GO:0008380 GO:GO:0006397
GO:GO:0005681 GenomeReviews:CM000154_GR GO:GO:0003723
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 EMBL:AAFI02000175
InterPro:IPR022967 SMART:SM00316 KO:K12818 OMA:NAWCYEN
RefSeq:XP_635385.1 HSSP:P05055 ProteinModelPortal:Q54F05
EnsemblProtists:DDB0233399 GeneID:8628033 KEGG:ddi:DDB_G0291183
ProtClustDB:CLSZ2846610 Uniprot:Q54F05
Length = 1160
Score = 378 (138.1 bits), Expect = 1.4e-50, Sum P(2) = 1.4e-50
Identities = 112/338 (33%), Positives = 173/338 (51%)
Query: 233 RYIGQPEMGVGDKARPTIVRSSIDVACSCTVVEFLTEMGCRMDFEYISRGYMFRKGRMKI 292
+Y+ + G K T R ++ S V E E GC++ E GY R
Sbjct: 543 QYLAEAGYGTRGKIGCTQPRRVAAMSVSKRVAE---EFGCQLGQEV---GYAIRFEDCTS 596
Query: 293 LVSKIFKMSQG-KPSDSGVEPISQSYLVELSILAPGGQDVIGEDMKAFAEQLKPL-KRTQ 350
+ I M+ G + ++P +Y V IL + I D+ F + L +R +
Sbjct: 597 PETIIKFMTDGILLRECLLDPNLSAYSV--IILDEAHERTISTDV-LFGLLKQALQRRPE 653
Query: 351 LKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYYSNDPVVNYVQGVVDTAI 410
LK++I+SAT++AE+ +++ NA + + G +PV + Y+ DP +Y+ + T +
Sbjct: 654 LKVLITSATLEAEKFSKYF-----MNAQLFIIPGRTFPVDIRYTKDPEADYLDASLITVM 708
Query: 411 KIHESMPVGDILAFVIGLEQIEHIIGIL-KQYHNQREDLK-LLILPMHGSLPNNEQIKVF 468
+IH S P GDIL F+ G E+I+ IL ++ + ++ L+ILP++ +LP+ Q K+F
Sbjct: 709 QIHLSEPPGDILLFLTGQEEIDAACQILYERMKSLGSNVPDLIILPVYSALPSEMQTKIF 768
Query: 469 RPTPRAMRKIVIATNIAETSITIPGIVYVIDPGFVKARWFNPNTLTNSLVVVPISKXXXX 528
P P RK+VIATNIAETS+TI GI YVIDPGF K + FNP +SLVV PIS+
Sbjct: 769 EPAPPGSRKVVIATNIAETSLTIDGIYYVIDPGFSKQKCFNPKNGMDSLVVAPISQAAAR 828
Query: 529 XXXXXXXXXXXXHVYRKNFMYNR-LFIHFCVSRNIPTI 565
YR +Y F + ++ +IP I
Sbjct: 829 QRSGRAGRTGPGKCYR---LYTESAFKNEMLASSIPEI 863
Score = 301 (111.0 bits), Expect = 9.1e-23, P = 9.1e-23
Identities = 63/110 (57%), Positives = 81/110 (73%)
Query: 587 QYLLEAGWCYDTK-LIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVT 645
QYL EAG Y T+ IG T+PRR++ S++ RV+EE LG VGY IRF+DCT+ + T
Sbjct: 543 QYLAEAG--YGTRGKIGCTQPRRVAAMSVSKRVAEEFGCQLGQEVGYAIRFEDCTSPE-T 599
Query: 646 KIKYMTEGILMREMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKILK 695
IK+MT+GIL+RE + DP L YSVI+LDE HERTI TD+L GLLK+ L+
Sbjct: 600 IIKFMTDGILLRECLLDPNLSAYSVIILDEAHERTISTDVLFGLLKQALQ 649
Score = 237 (88.5 bits), Expect = 1.4e-50, Sum P(2) = 1.4e-50
Identities = 66/238 (27%), Positives = 125/238 (52%)
Query: 614 LANRVSEELRTTLGHTVGYTIRFDDCTTEDVTKIKYMTEGILMREMMTDPLLRKYSVIML 673
LA+ + E RT LG+TV + D+ +M + + + + + YS+ L
Sbjct: 856 LASSIPEIQRTNLGNTV---LTMKAMGINDLLNFDFMDPPPV--QTLVSAMEQLYSLGAL 910
Query: 674 DEVH-----ERTIFTDILMGLLKKILKDKERDFECSDEIASILSLLQVQDIFIKPSSGAL 728
DE R + L L K+L D CSDEI +++++L VQ++F +P
Sbjct: 911 DEEGLLTRLGRKMAEFPLDPQLSKMLIASV-DLGCSDEILTVVAMLSVQNVFYRPKEKQ- 968
Query: 729 SLKARVLRRNFEVEQGDLLTLLNIFKFYEKQENKKQFCHKYFFNYKVLKRAAELKNQMIL 788
+L + + F+ E GD LTLLN+++ ++ + +C + F + L+RA +++ Q+I
Sbjct: 969 ALADQKKAKFFQPE-GDHLTLLNVYESWKNSKFSNPWCFENFVQARSLRRAQDVRKQLIT 1027
Query: 789 LLKKSSIPLVTSPRNTNAVLKCLTNGFFSNAAYLHYSGVYRTVRGNEDLYIHPSSVLY 846
++ + + ++++ RN + K + +GFF+NA+ + Y+T+ + +YIHPSS L+
Sbjct: 1028 IMDRYKLDIISAGRNYTKIQKAICSGFFANASKKDPNEGYKTLVEGQPVYIHPSSTLF 1085
Score = 229 (85.7 bits), Expect = 1.4e-20, Sum P(2) = 1.4e-20
Identities = 53/111 (47%), Positives = 75/111 (67%)
Query: 43 KFSRLYTEASF-SQLNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRVA 101
K RLYTE++F +++ + PE+QRT L + VL +KA+GI+++L F F PPP Q L A
Sbjct: 841 KCYRLYTESAFKNEMLASSIPEIQRTNLGNTVLTMKAMGINDLLNFDFMDPPPVQTLVSA 900
Query: 102 LELLYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLLSSGSVLDSAVEIL 152
+E LYSLGA+D G LT+ +G MAE PL P +K+L++S L + EIL
Sbjct: 901 MEQLYSLGALDEEGLLTR-LGRKMAEFPLDPQLSKMLIASVD-LGCSDEIL 949
Score = 106 (42.4 bits), Expect = 5.2e-21, Sum P(3) = 5.2e-21
Identities = 21/37 (56%), Positives = 28/37 (75%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDIL 37
MT+GIL+ DP++ YSVI+LD+ HERTI TD+L
Sbjct: 604 MTDGILLRECLLDPNLSAYSVIILDEAHERTISTDVL 640
Score = 43 (20.2 bits), Expect = 5.2e-21, Sum P(3) = 5.2e-21
Identities = 9/27 (33%), Positives = 16/27 (59%)
Query: 137 VLLSSGSVLDSAVEILLHRLRGLCDNV 163
+ L+ +D+A +IL R++ L NV
Sbjct: 721 LFLTGQEEIDAACQILYERMKSLGSNV 747
Score = 39 (18.8 bits), Expect = 3.8e-14, Sum P(3) = 3.8e-14
Identities = 13/64 (20%), Positives = 29/64 (45%)
Query: 46 RLYTEASFS-QLNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRVALEL 104
+L E ++ + +CT PE ++ +L + L N+ +S A ++ ++
Sbjct: 580 QLGQEVGYAIRFEDCTSPETIIKFMTDGILLRECLLDPNLSAYSVIILDEAHERTISTDV 639
Query: 105 LYSL 108
L+ L
Sbjct: 640 LFGL 643
>WB|WBGene00003392 [details] [associations]
symbol:mog-4 species:6239 "Caenorhabditis elegans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0009792 "embryo development ending in
birth or egg hatching" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0018996
"molting cycle, collagen and cuticulin-based cuticle" evidence=IMP]
[GO:0042127 "regulation of cell proliferation" evidence=IMP]
[GO:0040020 "regulation of meiosis" evidence=IMP] [GO:0040022
"feminization of hermaphroditic germ-line" evidence=IMP]
[GO:0007281 "germ cell development" evidence=IMP] [GO:0048589
"developmental growth" evidence=IMP] [GO:0010172 "embryonic body
morphogenesis" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001482 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF00437
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005634 GO:GO:0009792
GO:GO:0002119 GO:GO:0008380 GO:GO:0006810 GO:GO:0018996
GO:GO:0006397 GO:GO:0003676 GO:GO:0042127 GO:GO:0040035
GO:GO:0007281 GO:GO:0048589 GO:GO:0010172 GO:GO:0040020
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0040022 GO:GO:0008026
HOGENOM:HOG000175261 KO:K12813 EMBL:AF286900 EMBL:Z81462
EMBL:Z81457 PIR:T18832 RefSeq:NP_497027.1 UniGene:Cel.17139
ProteinModelPortal:O45244 SMR:O45244 DIP:DIP-24771N IntAct:O45244
MINT:MINT-1105817 STRING:O45244 PaxDb:O45244 EnsemblMetazoa:C04H5.6
GeneID:175117 KEGG:cel:CELE_C04H5.6 UCSC:C04H5.6 CTD:175117
WormBase:C04H5.6 GeneTree:ENSGT00700000104241 InParanoid:O45244
OMA:GTLHREF NextBio:886834 ArrayExpress:O45244 Uniprot:O45244
Length = 1008
Score = 355 (130.0 bits), Expect = 2.1e-50, Sum P(3) = 2.1e-50
Identities = 79/180 (43%), Positives = 115/180 (63%)
Query: 348 RTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYYSNDPVVNYVQGVVD 407
R LKL+ISSAT+DAE+ F++ +A I + G +PV +YY+ P +YV +
Sbjct: 508 RKDLKLLISSATLDAEKFSSFFD-----DAPIFRIPGRRFPVDIYYTQAPEADYVDAAIV 562
Query: 408 TAIKIHESMPV-GDILAFVIGLEQIEHII-GILKQYHNQREDLKLLI-LPMHGSLPNNEQ 464
T ++IH + P+ GDIL F+ G E+IE + ++++ +K LI LP++ +LP++ Q
Sbjct: 563 TIMQIHLTQPLPGDILVFLTGQEEIETVQEALMERSKALGSKIKELIPLPVYANLPSDLQ 622
Query: 465 IKVFRPTPRAMRKIVIATNIAETSITIPGIVYVIDPGFVKARWFNPNTLTNSLVVVPISK 524
K+F PTP+ RK+V+ATNIAETS+TI GI YVIDPGF K F+ + L VV ISK
Sbjct: 623 AKIFEPTPKDARKVVLATNIAETSVTIDGINYVIDPGFSKQNSFDARSGVEHLHVVTISK 682
Score = 312 (114.9 bits), Expect = 9.4e-40, Sum P(2) = 9.4e-40
Identities = 60/109 (55%), Positives = 82/109 (75%)
Query: 587 QYLLEAGWCYDTKLIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTK 646
QYL EAG+C K IG T+PRR++ S+A RV++E+ LG VGY+IRF+DCT+E T
Sbjct: 399 QYLYEAGFCEGGKRIGCTQPRRVAAMSVAARVADEVGCKLGTQVGYSIRFEDCTSEK-TV 457
Query: 647 IKYMTEGILMREMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKILK 695
+KYMT+G+L+RE + +P L YSV+M+DE HERT+ TDIL GL+K I +
Sbjct: 458 LKYMTDGMLLREFLNEPDLASYSVMMIDEAHERTLHTDILFGLVKDIAR 506
Score = 222 (83.2 bits), Expect = 1.2e-35, Sum P(3) = 1.2e-35
Identities = 47/100 (47%), Positives = 67/100 (67%)
Query: 43 KFSRLYTEASFS-QLNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRVA 101
K RLYT ++ +L E PE+QRT L + VL LK+LGIH+++ F F PPP + L +A
Sbjct: 699 KCFRLYTAWAYKHELEEQPIPEIQRTNLGNVVLMLKSLGIHDLVHFDFLDPPPQETLVIA 758
Query: 102 LELLYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLLSS 141
LE LY+LGA++ G LTK +G MAE P P +K++++S
Sbjct: 759 LEQLYALGALNHRGELTK-LGRRMAEFPCDPCMSKMIIAS 797
Score = 201 (75.8 bits), Expect = 2.1e-50, Sum P(3) = 2.1e-50
Identities = 44/158 (27%), Positives = 92/158 (58%)
Query: 690 LKKILKDKERDFECSDEIASILSLLQVQD-IFIKPSSGALSLKARVLRRNFEVEQGDLLT 748
+ K++ E+ +ECS+EI +I ++L +F +P A + A R+ F GD +T
Sbjct: 790 MSKMIIASEK-YECSEEIVTIAAMLSCNAAVFYRPK--AQVIHADSARKGFWSPAGDHIT 846
Query: 749 LLNIFKFYEKQENKKQFCHKYFFNYKVLKRAAELKNQMILLLKKSSIPLVTSPRNTNAVL 808
L+N++ +++ +++C + + ++ +KRA ++++Q++ LL++ I +S +T +
Sbjct: 847 LMNVYNKWQESSFSQRWCVENYVQHRTMKRARDVRDQLVGLLERVEIETKSST-DTIKIR 905
Query: 809 KCLTNGFFSNAAYLHYSGVYRTVRGNEDLYIHPSSVLY 846
K +T G+F N + L +G Y+TV+ + HP+S L+
Sbjct: 906 KAITAGYFYNVSKLDNTGHYKTVKHKHTTHPHPNSCLF 943
Score = 103 (41.3 bits), Expect = 2.1e-50, Sum P(3) = 2.1e-50
Identities = 19/46 (41%), Positives = 31/46 (67%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILMECSRKFSR 46
MT+G+L+ ++P + YSV+M+D+ HERT+ TDIL + +R
Sbjct: 461 MTDGMLLREFLNEPDLASYSVMMIDEAHERTLHTDILFGLVKDIAR 506
Score = 43 (20.2 bits), Expect = 3.3e-11, Sum P(2) = 3.3e-11
Identities = 9/19 (47%), Positives = 13/19 (68%)
Query: 434 IIGILKQYHNQREDLKLLI 452
+ G++K R+DLKLLI
Sbjct: 497 LFGLVKDIARFRKDLKLLI 515
Score = 40 (19.1 bits), Expect = 9.4e-17, Sum P(3) = 9.4e-17
Identities = 20/69 (28%), Positives = 29/69 (42%)
Query: 229 PYQLRYIGQPEMGVGDKARPTIVRSSIDVACSCTVVEFLTEMGCRMDFEYISRGYMFRKG 288
P + Y PE D A TI++ + ++ FLT G + + E + M R
Sbjct: 543 PVDIYYTQAPEADYVDAAIVTIMQIHLTQPLPGDILVFLT--G-QEEIETVQEALMERS- 598
Query: 289 RMKILVSKI 297
K L SKI
Sbjct: 599 --KALGSKI 605
>UNIPROTKB|O45244 [details] [associations]
symbol:mog-4 "Probable pre-mRNA-splicing factor
ATP-dependent RNA helicase mog-4" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001482 InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF00437 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0005634 GO:GO:0009792 GO:GO:0002119
GO:GO:0008380 GO:GO:0006810 GO:GO:0018996 GO:GO:0006397
GO:GO:0003676 GO:GO:0042127 GO:GO:0040035 GO:GO:0007281
GO:GO:0048589 GO:GO:0010172 GO:GO:0040020 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0040022 GO:GO:0008026 HOGENOM:HOG000175261
KO:K12813 EMBL:AF286900 EMBL:Z81462 EMBL:Z81457 PIR:T18832
RefSeq:NP_497027.1 UniGene:Cel.17139 ProteinModelPortal:O45244
SMR:O45244 DIP:DIP-24771N IntAct:O45244 MINT:MINT-1105817
STRING:O45244 PaxDb:O45244 EnsemblMetazoa:C04H5.6 GeneID:175117
KEGG:cel:CELE_C04H5.6 UCSC:C04H5.6 CTD:175117 WormBase:C04H5.6
GeneTree:ENSGT00700000104241 InParanoid:O45244 OMA:GTLHREF
NextBio:886834 ArrayExpress:O45244 Uniprot:O45244
Length = 1008
Score = 355 (130.0 bits), Expect = 2.1e-50, Sum P(3) = 2.1e-50
Identities = 79/180 (43%), Positives = 115/180 (63%)
Query: 348 RTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYYSNDPVVNYVQGVVD 407
R LKL+ISSAT+DAE+ F++ +A I + G +PV +YY+ P +YV +
Sbjct: 508 RKDLKLLISSATLDAEKFSSFFD-----DAPIFRIPGRRFPVDIYYTQAPEADYVDAAIV 562
Query: 408 TAIKIHESMPV-GDILAFVIGLEQIEHII-GILKQYHNQREDLKLLI-LPMHGSLPNNEQ 464
T ++IH + P+ GDIL F+ G E+IE + ++++ +K LI LP++ +LP++ Q
Sbjct: 563 TIMQIHLTQPLPGDILVFLTGQEEIETVQEALMERSKALGSKIKELIPLPVYANLPSDLQ 622
Query: 465 IKVFRPTPRAMRKIVIATNIAETSITIPGIVYVIDPGFVKARWFNPNTLTNSLVVVPISK 524
K+F PTP+ RK+V+ATNIAETS+TI GI YVIDPGF K F+ + L VV ISK
Sbjct: 623 AKIFEPTPKDARKVVLATNIAETSVTIDGINYVIDPGFSKQNSFDARSGVEHLHVVTISK 682
Score = 312 (114.9 bits), Expect = 9.4e-40, Sum P(2) = 9.4e-40
Identities = 60/109 (55%), Positives = 82/109 (75%)
Query: 587 QYLLEAGWCYDTKLIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTK 646
QYL EAG+C K IG T+PRR++ S+A RV++E+ LG VGY+IRF+DCT+E T
Sbjct: 399 QYLYEAGFCEGGKRIGCTQPRRVAAMSVAARVADEVGCKLGTQVGYSIRFEDCTSEK-TV 457
Query: 647 IKYMTEGILMREMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKILK 695
+KYMT+G+L+RE + +P L YSV+M+DE HERT+ TDIL GL+K I +
Sbjct: 458 LKYMTDGMLLREFLNEPDLASYSVMMIDEAHERTLHTDILFGLVKDIAR 506
Score = 222 (83.2 bits), Expect = 1.2e-35, Sum P(3) = 1.2e-35
Identities = 47/100 (47%), Positives = 67/100 (67%)
Query: 43 KFSRLYTEASFS-QLNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRVA 101
K RLYT ++ +L E PE+QRT L + VL LK+LGIH+++ F F PPP + L +A
Sbjct: 699 KCFRLYTAWAYKHELEEQPIPEIQRTNLGNVVLMLKSLGIHDLVHFDFLDPPPQETLVIA 758
Query: 102 LELLYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLLSS 141
LE LY+LGA++ G LTK +G MAE P P +K++++S
Sbjct: 759 LEQLYALGALNHRGELTK-LGRRMAEFPCDPCMSKMIIAS 797
Score = 201 (75.8 bits), Expect = 2.1e-50, Sum P(3) = 2.1e-50
Identities = 44/158 (27%), Positives = 92/158 (58%)
Query: 690 LKKILKDKERDFECSDEIASILSLLQVQD-IFIKPSSGALSLKARVLRRNFEVEQGDLLT 748
+ K++ E+ +ECS+EI +I ++L +F +P A + A R+ F GD +T
Sbjct: 790 MSKMIIASEK-YECSEEIVTIAAMLSCNAAVFYRPK--AQVIHADSARKGFWSPAGDHIT 846
Query: 749 LLNIFKFYEKQENKKQFCHKYFFNYKVLKRAAELKNQMILLLKKSSIPLVTSPRNTNAVL 808
L+N++ +++ +++C + + ++ +KRA ++++Q++ LL++ I +S +T +
Sbjct: 847 LMNVYNKWQESSFSQRWCVENYVQHRTMKRARDVRDQLVGLLERVEIETKSST-DTIKIR 905
Query: 809 KCLTNGFFSNAAYLHYSGVYRTVRGNEDLYIHPSSVLY 846
K +T G+F N + L +G Y+TV+ + HP+S L+
Sbjct: 906 KAITAGYFYNVSKLDNTGHYKTVKHKHTTHPHPNSCLF 943
Score = 103 (41.3 bits), Expect = 2.1e-50, Sum P(3) = 2.1e-50
Identities = 19/46 (41%), Positives = 31/46 (67%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILMECSRKFSR 46
MT+G+L+ ++P + YSV+M+D+ HERT+ TDIL + +R
Sbjct: 461 MTDGMLLREFLNEPDLASYSVMMIDEAHERTLHTDILFGLVKDIAR 506
Score = 43 (20.2 bits), Expect = 3.3e-11, Sum P(2) = 3.3e-11
Identities = 9/19 (47%), Positives = 13/19 (68%)
Query: 434 IIGILKQYHNQREDLKLLI 452
+ G++K R+DLKLLI
Sbjct: 497 LFGLVKDIARFRKDLKLLI 515
Score = 40 (19.1 bits), Expect = 9.4e-17, Sum P(3) = 9.4e-17
Identities = 20/69 (28%), Positives = 29/69 (42%)
Query: 229 PYQLRYIGQPEMGVGDKARPTIVRSSIDVACSCTVVEFLTEMGCRMDFEYISRGYMFRKG 288
P + Y PE D A TI++ + ++ FLT G + + E + M R
Sbjct: 543 PVDIYYTQAPEADYVDAAIVTIMQIHLTQPLPGDILVFLT--G-QEEIETVQEALMERS- 598
Query: 289 RMKILVSKI 297
K L SKI
Sbjct: 599 --KALGSKI 605
>POMBASE|SPBC16H5.10c [details] [associations]
symbol:prp43 "ATP-dependent RNA helicase Prp43
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000390
"spliceosomal complex disassembly" evidence=ISO] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISO;ISS] [GO:0005524
"ATP binding" evidence=ISM] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005681 "spliceosomal complex" evidence=ISO] [GO:0006364 "rRNA
processing" evidence=ISS] [GO:0030686 "90S preribosome"
evidence=ISS] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 PomBase:SPBC16H5.10c GO:GO:0005524 EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0005681 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0030686
GO:GO:0006364 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 GO:GO:0000390 KO:K12820 OMA:TVLQIHA
EMBL:AB027819 PIR:T39615 RefSeq:NP_595937.1
ProteinModelPortal:O42945 IntAct:O42945 STRING:O42945
EnsemblFungi:SPBC16H5.10c.1 GeneID:2540057 KEGG:spo:SPBC16H5.10c
OrthoDB:EOG4S7NZ4 NextBio:20801194 Uniprot:O42945
Length = 735
Score = 351 (128.6 bits), Expect = 4.8e-50, Sum P(3) = 4.8e-50
Identities = 79/187 (42%), Positives = 116/187 (62%)
Query: 347 KRTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYYSNDPVVNYVQGVV 406
+R LK+I+ SAT+DA++ +++ +A +L+V G YPV +YY+ +P +Y++ +
Sbjct: 219 RRPDLKIIVMSATLDAKKFQKYF-----FDAPLLAVPGRTYPVEIYYTQEPERDYLEAAL 273
Query: 407 DTAIKIHESMPVGDILAFVIGLEQIEHIIG--ILKQYHNQREDLK--LLILPMHGSLPNN 462
T ++IH GDIL F+ G E+IE L+ RE L + P++GSLP N
Sbjct: 274 RTVLQIHVEEGPGDILVFLTGEEEIEDACRKITLEADDLVREGAAGPLKVYPLYGSLPPN 333
Query: 463 EQIKVFRPTPRAM-----RKIVIATNIAETSITIPGIVYVIDPGFVKARWFNPNTLTNSL 517
+Q ++F PTP RK+VI+TNIAETS+TI GIVYV+DPGF K + +NP SL
Sbjct: 334 QQQRIFEPTPEDTKSGYGRKVVISTNIAETSLTIDGIVYVVDPGFSKQKIYNPRIRVESL 393
Query: 518 VVVPISK 524
+V PISK
Sbjct: 394 LVSPISK 400
Score = 273 (101.2 bits), Expect = 1.2e-35, Sum P(2) = 1.2e-35
Identities = 51/93 (54%), Positives = 72/93 (77%)
Query: 601 IGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTKIKYMTEGILMREMM 660
I T+PRR++ S+A RV++E+ LG VGY IRF+DC+ + T +KYMT+G+L+RE M
Sbjct: 125 IACTQPRRVAAMSVAKRVADEMDVDLGEEVGYNIRFEDCSGPN-TLLKYMTDGMLLREAM 183
Query: 661 TDPLLRKYSVIMLDEVHERTIFTDILMGLLKKI 693
TD +L +YS I+LDE HERT+ TDILMGL+K++
Sbjct: 184 TDHMLSRYSCIILDEAHERTLATDILMGLMKRL 216
Score = 198 (74.8 bits), Expect = 4.8e-50, Sum P(3) = 4.8e-50
Identities = 45/148 (30%), Positives = 85/148 (57%)
Query: 700 DFECSDEIASILSLLQVQDIFIKPSSGALSLKARVLRRNFEVEQGDLLTLLNIFKFYEKQ 759
+F CS+E+ S+ +LL V ++F++P+S A L A +R+ F GD LTLLN++ Y+
Sbjct: 517 EFYCSNEVLSLTALLSVPNVFVRPNS-ARKL-ADEMRQQFTHPDGDHLTLLNVYHAYKSG 574
Query: 760 ENKKQFCHKYFFNYKVLKRAAELKNQMILLLKKSSIPLVTSP---RNTNA-VLKCLTNGF 815
E +C +F +++ L A ++ Q+ +++ + L+++P +N + + L +GF
Sbjct: 575 EGTADWCWNHFLSHRALISADNVRKQLRRTMERQEVELISTPFDDKNYYVNIRRALVSGF 634
Query: 816 FSNAAYLHYSGV-YRTVRGNEDLYIHPS 842
F A +G Y T++ N+ + +HPS
Sbjct: 635 FMQVAKKSANGKNYVTMKDNQVVSLHPS 662
Score = 187 (70.9 bits), Expect = 1.2e-31, Sum P(3) = 1.2e-31
Identities = 45/100 (45%), Positives = 62/100 (62%)
Query: 43 KFSRLYTEASF-SQLNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRVA 101
K RLYTE +F +L E T PE+ R+ LSS VL+LK LGI +++ F + PP + + A
Sbjct: 417 KCFRLYTEEAFRKELIEQTYPEILRSNLSSTVLELKKLGIDDLVHFDYMDPPAPETMMRA 476
Query: 102 LELLYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLLSS 141
LE L L +D NG+LT P+G +E PL P A +L+ S
Sbjct: 477 LEELNYLNCLDDNGDLT-PLGRKASEFPLDPNLAVMLIRS 515
Score = 98 (39.6 bits), Expect = 4.8e-50, Sum P(3) = 4.8e-50
Identities = 19/45 (42%), Positives = 30/45 (66%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILMECSRKFS 45
MT+G+L+ D + +YS I+LD+ HERT+ TDILM ++ +
Sbjct: 173 MTDGMLLREAMTDHMLSRYSCIILDEAHERTLATDILMGLMKRLA 217
Score = 46 (21.3 bits), Expect = 5.3e-11, Sum P(3) = 5.3e-11
Identities = 11/39 (28%), Positives = 22/39 (56%)
Query: 434 IIGILKQYHNQREDLKLLILPMHGSLPNNEQIKVFRPTP 472
++G++K+ +R DLK+++ M +L + K F P
Sbjct: 209 LMGLMKRLATRRPDLKIIV--MSATLDAKKFQKYFFDAP 245
Score = 38 (18.4 bits), Expect = 8.7e-44, Sum P(3) = 8.7e-44
Identities = 11/54 (20%), Positives = 24/54 (44%)
Query: 55 QLNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRVALELLYSL 108
+ +C+ P ++ +L +A+ H + R+S A +A ++L L
Sbjct: 159 RFEDCSGPNTLLKYMTDGMLLREAMTDHMLSRYSCIILDEAHERTLATDILMGL 212
>ASPGD|ASPL0000059403 [details] [associations]
symbol:AN0133 species:162425 "Emericella nidulans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IEA] [GO:0000466 "maturation of 5.8S rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IEA] [GO:0000463 "maturation of LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000390 "spliceosomal complex disassembly" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IEA]
[GO:0030686 "90S preribosome" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0071014 "post-mRNA release
spliceosomal complex" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:BN001308 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:AACD01000004 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 KO:K12820
OMA:TVLQIHA OrthoDB:EOG4S7NZ4 RefSeq:XP_657737.1 STRING:Q5BH47
EnsemblFungi:CADANIAT00002613 GeneID:2875910 KEGG:ani:AN0133.2
Uniprot:Q5BH47
Length = 769
Score = 336 (123.3 bits), Expect = 6.0e-50, Sum P(3) = 6.0e-50
Identities = 76/189 (40%), Positives = 118/189 (62%)
Query: 347 KRTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYYSNDPVVNYVQGVV 406
+R LK+II SAT+DA++ +++N +A +L+V G +PV ++Y+ +P +YV+ +
Sbjct: 243 RRPDLKIIIMSATLDAQKFQRYFN-----DAPLLAVPGRTHPVEIFYTPEPEQDYVEAAI 297
Query: 407 DTAIKIHESMPVGDILAFVIGLEQIEHIIGILKQYHNQ--RE-DL-KLLILPMHGSLPNN 462
T ++IH + GDIL F+ G E+IE + ++ RE D L + ++GSLP +
Sbjct: 298 RTVLQIHATEDEGDILLFLTGEEEIEDAARKISLEGDEMIREADAGPLKVYTLYGSLPPH 357
Query: 463 EQIKVFRPTP-------RAMRKIVIATNIAETSITIPGIVYVIDPGFVKARWFNPNTLTN 515
Q ++F P P R RK++++TNIAETS+TI GIVYV+DPGF K + +NP
Sbjct: 358 MQQRIFEPAPPPRRPGGRPGRKVIVSTNIAETSLTIDGIVYVVDPGFSKQKIYNPRIRVE 417
Query: 516 SLVVVPISK 524
SL+V PISK
Sbjct: 418 SLLVSPISK 426
Score = 274 (101.5 bits), Expect = 2.9e-37, Sum P(2) = 2.9e-37
Identities = 53/97 (54%), Positives = 74/97 (76%)
Query: 599 KLIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTKIKYMTEGILMRE 658
K+I T+PRR++ S+A RV+ EL TLG VGY+IRF+D T+ T +KYMT+G+L+RE
Sbjct: 147 KMIACTQPRRVAAMSVAQRVAAELDVTLGEEVGYSIRFEDMTSPK-TLLKYMTDGMLLRE 205
Query: 659 MMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKILK 695
M D L +YS I+LDE HERT+ TD+LMGLLK++++
Sbjct: 206 AMNDHELSRYSTIILDEAHERTMSTDVLMGLLKEVVQ 242
Score = 213 (80.0 bits), Expect = 6.0e-50, Sum P(3) = 6.0e-50
Identities = 50/155 (32%), Positives = 89/155 (57%)
Query: 700 DFECSDEIASILSLLQVQDIFIKPSSGALSLKARVLRRNFEVEQGDLLTLLNI---FKFY 756
+F CS+EI SI +LL V IF++P+S +A ++ F GD LTLLN FK
Sbjct: 543 EFYCSNEILSITALLSVPQIFVRPASQRK--RADEMKNLFAHPDGDHLTLLNAYHAFKSP 600
Query: 757 EKQENKKQFCHKYFFNYKVLKRAAELKNQMILLLKKSSIPLVTSP----RNTNAVLKCLT 812
E QEN KQ+CH +F + + L+ A ++ Q++ ++++ + ++++ + + + L
Sbjct: 601 EAQENPKQWCHDHFLSLRSLQSADNVRMQLLRIMEREELEMISTSFEDKKYYENIRRALC 660
Query: 813 NGFFSNAAYLHYSG--VYRTVRGNEDLYIHPSSVL 845
GFF A G +Y T++ ++++ +HPS+VL
Sbjct: 661 AGFFMQVAKKENQGKSMYMTIKDHQNVLLHPSTVL 695
Score = 192 (72.6 bits), Expect = 6.1e-34, Sum P(3) = 6.1e-34
Identities = 46/100 (46%), Positives = 63/100 (63%)
Query: 43 KFSRLYTEASFS-QLNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRVA 101
K RLYTE++F +L + T PE+ R+ LSS VL+LK LGI +++ F PP + L A
Sbjct: 443 KCFRLYTESAFKKELIDQTYPEILRSNLSSTVLELKKLGIDDLVHFDLMDPPAPETLMRA 502
Query: 102 LELLYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLLSS 141
LE L L +D +GNLT P+G +E PL P A +L+SS
Sbjct: 503 LEELNYLACLDDDGNLT-PLGRLASEFPLDPALAVMLISS 541
Score = 100 (40.3 bits), Expect = 6.0e-50, Sum P(3) = 6.0e-50
Identities = 18/38 (47%), Positives = 28/38 (73%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILM 38
MT+G+L+ +D + +YS I+LD+ HERT+ TD+LM
Sbjct: 197 MTDGMLLREAMNDHELSRYSTIILDEAHERTMSTDVLM 234
Score = 50 (22.7 bits), Expect = 1.5e-13, Sum P(2) = 1.5e-13
Identities = 31/136 (22%), Positives = 59/136 (43%)
Query: 343 LKPLKRTQLKLIISSAT--VDAEEICQFYNISASSNATILSVKGHLYPVSVYYSNDPVVN 400
L L +TQ K+I + V A + Q ++A + T+ G+ S ++
Sbjct: 138 LDDLPQTQRKMIACTQPRRVAAMSVAQ--RVAAELDVTLGEEVGYSIRFEDMTSPKTLLK 195
Query: 401 YV-QGVV-DTAIKIHESMPVGDILAFVIGLEQI--EHIIGILKQYHNQREDLKLLILPMH 456
Y+ G++ A+ HE I+ + + ++G+LK+ +R DLK++I M
Sbjct: 196 YMTDGMLLREAMNDHELSRYSTIILDEAHERTMSTDVLMGLLKEVVQRRPDLKIII--MS 253
Query: 457 GSLPNNEQIKVFRPTP 472
+L + + F P
Sbjct: 254 ATLDAQKFQRYFNDAP 269
Score = 37 (18.1 bits), Expect = 2.3e-43, Sum P(3) = 2.3e-43
Identities = 9/40 (22%), Positives = 20/40 (50%)
Query: 50 EASFS-QLNECTPPEMQRTELSSAVLQLKALGIHNILRFS 88
E +S + + T P+ ++ +L +A+ H + R+S
Sbjct: 177 EVGYSIRFEDMTSPKTLLKYMTDGMLLREAMNDHELSRYS 216
>WB|WBGene00003389 [details] [associations]
symbol:mog-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0010171 "body morphogenesis"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] [GO:0042127 "regulation of cell proliferation"
evidence=IMP] [GO:0040020 "regulation of meiosis" evidence=IMP]
[GO:0007281 "germ cell development" evidence=IMP] [GO:0040022
"feminization of hermaphroditic germ-line" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0006898 GO:GO:0002119
GO:GO:0008380 GO:GO:0006397 GO:GO:0010171 GO:GO:0003676
GO:GO:0042127 GO:GO:0007281 GO:GO:0040020 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0040022 GO:GO:0008026 HOGENOM:HOG000175261
EMBL:Z29560 KO:K12815 EMBL:AF120269 PIR:F88570 PIR:S41025
RefSeq:NP_499212.1 UniGene:Cel.5743 ProteinModelPortal:P34498
SMR:P34498 IntAct:P34498 STRING:P34498 PaxDb:P34498 PRIDE:P34498
EnsemblMetazoa:K03H1.2 GeneID:176409 KEGG:cel:CELE_K03H1.2
UCSC:K03H1.2.1 CTD:176409 WormBase:K03H1.2
GeneTree:ENSGT00700000104877 InParanoid:P34498 OMA:PSRSTWE
NextBio:892452 Uniprot:P34498
Length = 1131
Score = 345 (126.5 bits), Expect = 1.5e-49, Sum P(3) = 1.5e-49
Identities = 76/221 (34%), Positives = 121/221 (54%)
Query: 347 KRTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYYSNDPVVNYVQGVV 406
KR LKLI++SAT+DA++ F+ N ++ G +PV ++++ PV +YV V
Sbjct: 583 KRADLKLIVTSATMDADKFADFFG----GNCPTFTIPGRTFPVELFHARTPVEDYVDAAV 638
Query: 407 DTAIKIHESMPVGDILAFVIGLEQIEHIIGILKQYHNQREDLK-LLILPMHGSLPNNEQI 465
A+ IH GDIL F+ G E IE ++K+ + ++ L +LP++ LP++ Q
Sbjct: 639 KQAVTIHLGGMDGDILIFMPGQEDIECTCEMIKEKLGELDEAPPLAVLPIYSQLPSDLQA 698
Query: 466 KVFRPTPRAMRKIVIATNIAETSITIPGIVYVIDPGFVKARWFNPNTLTNSLVVVPISKX 525
K+F+ P MRK ++ATNIAETS+T+ GI++VIDPGF K + +NP ++L + P+S+
Sbjct: 699 KIFQRAPGGMRKAIVATNIAETSLTVDGILFVIDPGFCKMKVYNPRIGMDALSIFPVSQA 758
Query: 526 XXXXXXXXXXXXXXXHVYRKNFMYN-RLFIHFCVSRNIPTI 565
YR +Y R F + +P I
Sbjct: 759 SANQRTGRAGRTGPGQCYR---LYTERQFKDELLKSTVPEI 796
Score = 295 (108.9 bits), Expect = 3.9e-22, P = 3.9e-22
Identities = 60/116 (51%), Positives = 85/116 (73%)
Query: 587 QYLLEAGWCYDTKLIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTK 646
QYLLE G+ D+ LIG T+PRR++ S+A RV++E+ LG VGY IRF+DCT+E T
Sbjct: 476 QYLLEDGFG-DSGLIGCTQPRRVAAMSVARRVADEMGVDLGQDVGYAIRFEDCTSEK-TI 533
Query: 647 IKYMTEGILMREMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKILKDKERDFE 702
IKYMT+GIL+RE + D L +YS I++DE HER++ TD+L GLL++++ K D +
Sbjct: 534 IKYMTDGILLRECLGDGSLDQYSAIIMDEAHERSLNTDVLFGLLREVIA-KRADLK 588
Score = 216 (81.1 bits), Expect = 1.5e-49, Sum P(3) = 1.5e-49
Identities = 68/259 (26%), Positives = 124/259 (47%)
Query: 593 GWCYDTKLIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTKIKYMTE 652
G CY +L TE R+ L + V E RT L + V + +D+ K +M
Sbjct: 773 GQCY--RLY--TE-RQFKDELLKSTVPEIQRTNLANVV---LLLKSLGVDDLLKFHFMDA 824
Query: 653 GILMREMMTDPLLRKYSVIMLDEVHE-----RTIFTDILMGLLKKILKDKERDFECSDEI 707
++ M + + + +++ LD + R + L L K+L + CSDE+
Sbjct: 825 P--PQDNMLNSMYQLWTLGALDNTGQLTPMGRKMVEFPLDPTLSKMLI-MSAEMGCSDEV 881
Query: 708 ASILSLLQVQDIFIKPSSGALSLKARVLRRNFEVEQGDLLTLLNIFKFYEKQENKKQFCH 767
+I+S+L V IF +P A+ + F+V + D LT LN++ + + ++C
Sbjct: 882 LTIVSMLSVPAIFFRPKGREEEADAK--KEKFQVPESDHLTFLNVYIQWRTHKYSAKWCA 939
Query: 768 KYFFNYKVLKRAAELKNQMILLLKKSSIPLVTSPRNTNAVLKCLTNGFFSNAAYLHYSGV 827
+ + K LK+ E++ Q+ +++ +PL+++ + V KC+ + +F NAA L G
Sbjct: 940 DNYLHVKALKKVREVRAQLKEIMQDLKLPLISNGSEWDIVRKCICSAYFHNAARLKGIGE 999
Query: 828 YRTVRGNEDLYIHPSSVLY 846
Y VR ++HP+S L+
Sbjct: 1000 YVNVRTGIPCFLHPTSALF 1018
Score = 207 (77.9 bits), Expect = 6.7e-17, Sum P(2) = 6.7e-17
Identities = 44/100 (44%), Positives = 65/100 (65%)
Query: 46 RLYTEASFS-QLNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRVALEL 104
RLYTE F +L + T PE+QRT L++ VL LK+LG+ ++L+F F PP N+ ++
Sbjct: 777 RLYTERQFKDELLKSTVPEIQRTNLANVVLLLKSLGVDDLLKFHFMDAPPQDNMLNSMYQ 836
Query: 105 LYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLLSSGSV 144
L++LGA+D G LT P+G M E PL P +K+L+ S +
Sbjct: 837 LWTLGALDNTGQLT-PMGRKMVEFPLDPTLSKMLIMSAEM 875
Score = 93 (37.8 bits), Expect = 1.5e-49, Sum P(3) = 1.5e-49
Identities = 18/43 (41%), Positives = 30/43 (69%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILMECSRK 43
MT+GIL+ D S+++YS I++D+ HER++ TD+L R+
Sbjct: 537 MTDGILLRECLGDGSLDQYSAIIMDEAHERSLNTDVLFGLLRE 579
Score = 41 (19.5 bits), Expect = 1.8e-12, Sum P(2) = 1.8e-12
Identities = 7/19 (36%), Positives = 14/19 (73%)
Query: 434 IIGILKQYHNQREDLKLLI 452
+ G+L++ +R DLKL++
Sbjct: 573 LFGLLREVIAKRADLKLIV 591
>UNIPROTKB|P34498 [details] [associations]
symbol:mog-1 "Probable pre-mRNA-splicing factor
ATP-dependent RNA helicase mog-1" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0005634 GO:GO:0009792 GO:GO:0006898
GO:GO:0002119 GO:GO:0008380 GO:GO:0006397 GO:GO:0010171
GO:GO:0003676 GO:GO:0042127 GO:GO:0007281 GO:GO:0040020
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0040022 GO:GO:0008026
HOGENOM:HOG000175261 EMBL:Z29560 KO:K12815 EMBL:AF120269 PIR:F88570
PIR:S41025 RefSeq:NP_499212.1 UniGene:Cel.5743
ProteinModelPortal:P34498 SMR:P34498 IntAct:P34498 STRING:P34498
PaxDb:P34498 PRIDE:P34498 EnsemblMetazoa:K03H1.2 GeneID:176409
KEGG:cel:CELE_K03H1.2 UCSC:K03H1.2.1 CTD:176409 WormBase:K03H1.2
GeneTree:ENSGT00700000104877 InParanoid:P34498 OMA:PSRSTWE
NextBio:892452 Uniprot:P34498
Length = 1131
Score = 345 (126.5 bits), Expect = 1.5e-49, Sum P(3) = 1.5e-49
Identities = 76/221 (34%), Positives = 121/221 (54%)
Query: 347 KRTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYYSNDPVVNYVQGVV 406
KR LKLI++SAT+DA++ F+ N ++ G +PV ++++ PV +YV V
Sbjct: 583 KRADLKLIVTSATMDADKFADFFG----GNCPTFTIPGRTFPVELFHARTPVEDYVDAAV 638
Query: 407 DTAIKIHESMPVGDILAFVIGLEQIEHIIGILKQYHNQREDLK-LLILPMHGSLPNNEQI 465
A+ IH GDIL F+ G E IE ++K+ + ++ L +LP++ LP++ Q
Sbjct: 639 KQAVTIHLGGMDGDILIFMPGQEDIECTCEMIKEKLGELDEAPPLAVLPIYSQLPSDLQA 698
Query: 466 KVFRPTPRAMRKIVIATNIAETSITIPGIVYVIDPGFVKARWFNPNTLTNSLVVVPISKX 525
K+F+ P MRK ++ATNIAETS+T+ GI++VIDPGF K + +NP ++L + P+S+
Sbjct: 699 KIFQRAPGGMRKAIVATNIAETSLTVDGILFVIDPGFCKMKVYNPRIGMDALSIFPVSQA 758
Query: 526 XXXXXXXXXXXXXXXHVYRKNFMYN-RLFIHFCVSRNIPTI 565
YR +Y R F + +P I
Sbjct: 759 SANQRTGRAGRTGPGQCYR---LYTERQFKDELLKSTVPEI 796
Score = 295 (108.9 bits), Expect = 3.9e-22, P = 3.9e-22
Identities = 60/116 (51%), Positives = 85/116 (73%)
Query: 587 QYLLEAGWCYDTKLIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTK 646
QYLLE G+ D+ LIG T+PRR++ S+A RV++E+ LG VGY IRF+DCT+E T
Sbjct: 476 QYLLEDGFG-DSGLIGCTQPRRVAAMSVARRVADEMGVDLGQDVGYAIRFEDCTSEK-TI 533
Query: 647 IKYMTEGILMREMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKILKDKERDFE 702
IKYMT+GIL+RE + D L +YS I++DE HER++ TD+L GLL++++ K D +
Sbjct: 534 IKYMTDGILLRECLGDGSLDQYSAIIMDEAHERSLNTDVLFGLLREVIA-KRADLK 588
Score = 216 (81.1 bits), Expect = 1.5e-49, Sum P(3) = 1.5e-49
Identities = 68/259 (26%), Positives = 124/259 (47%)
Query: 593 GWCYDTKLIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTKIKYMTE 652
G CY +L TE R+ L + V E RT L + V + +D+ K +M
Sbjct: 773 GQCY--RLY--TE-RQFKDELLKSTVPEIQRTNLANVV---LLLKSLGVDDLLKFHFMDA 824
Query: 653 GILMREMMTDPLLRKYSVIMLDEVHE-----RTIFTDILMGLLKKILKDKERDFECSDEI 707
++ M + + + +++ LD + R + L L K+L + CSDE+
Sbjct: 825 P--PQDNMLNSMYQLWTLGALDNTGQLTPMGRKMVEFPLDPTLSKMLI-MSAEMGCSDEV 881
Query: 708 ASILSLLQVQDIFIKPSSGALSLKARVLRRNFEVEQGDLLTLLNIFKFYEKQENKKQFCH 767
+I+S+L V IF +P A+ + F+V + D LT LN++ + + ++C
Sbjct: 882 LTIVSMLSVPAIFFRPKGREEEADAK--KEKFQVPESDHLTFLNVYIQWRTHKYSAKWCA 939
Query: 768 KYFFNYKVLKRAAELKNQMILLLKKSSIPLVTSPRNTNAVLKCLTNGFFSNAAYLHYSGV 827
+ + K LK+ E++ Q+ +++ +PL+++ + V KC+ + +F NAA L G
Sbjct: 940 DNYLHVKALKKVREVRAQLKEIMQDLKLPLISNGSEWDIVRKCICSAYFHNAARLKGIGE 999
Query: 828 YRTVRGNEDLYIHPSSVLY 846
Y VR ++HP+S L+
Sbjct: 1000 YVNVRTGIPCFLHPTSALF 1018
Score = 207 (77.9 bits), Expect = 6.7e-17, Sum P(2) = 6.7e-17
Identities = 44/100 (44%), Positives = 65/100 (65%)
Query: 46 RLYTEASFS-QLNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRVALEL 104
RLYTE F +L + T PE+QRT L++ VL LK+LG+ ++L+F F PP N+ ++
Sbjct: 777 RLYTERQFKDELLKSTVPEIQRTNLANVVLLLKSLGVDDLLKFHFMDAPPQDNMLNSMYQ 836
Query: 105 LYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLLSSGSV 144
L++LGA+D G LT P+G M E PL P +K+L+ S +
Sbjct: 837 LWTLGALDNTGQLT-PMGRKMVEFPLDPTLSKMLIMSAEM 875
Score = 93 (37.8 bits), Expect = 1.5e-49, Sum P(3) = 1.5e-49
Identities = 18/43 (41%), Positives = 30/43 (69%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILMECSRK 43
MT+GIL+ D S+++YS I++D+ HER++ TD+L R+
Sbjct: 537 MTDGILLRECLGDGSLDQYSAIIMDEAHERSLNTDVLFGLLRE 579
Score = 41 (19.5 bits), Expect = 1.8e-12, Sum P(2) = 1.8e-12
Identities = 7/19 (36%), Positives = 14/19 (73%)
Query: 434 IIGILKQYHNQREDLKLLI 452
+ G+L++ +R DLKL++
Sbjct: 573 LFGLLREVIAKRADLKLIV 591
>ASPGD|ASPL0000006947 [details] [associations]
symbol:AN5827 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:BN001301 EMBL:AACD01000100 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 KO:K12813
OMA:RIDDHRD OrthoDB:EOG4SBJ63 RefSeq:XP_663431.1
ProteinModelPortal:Q5B0V3 EnsemblFungi:CADANIAT00007219
GeneID:2871194 KEGG:ani:AN5827.2 Uniprot:Q5B0V3
Length = 1128
Score = 381 (139.2 bits), Expect = 4.2e-49, Sum P(4) = 4.2e-49
Identities = 80/179 (44%), Positives = 115/179 (64%)
Query: 348 RTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYYSNDPVVNYVQGVVD 407
R LKL+ISSAT+DA++ +++ NA I ++ G +Y V ++Y+ P NY+ +
Sbjct: 625 RPDLKLLISSATMDAQKFQSYFD-----NAPIFNIPGRMYNVDIHYTQQPEANYLAAAIT 679
Query: 408 TAIKIHESMPVGDILAFVIGLEQIEHIIGILKQYHNQREDL--KLLILPMHGSLPNNEQI 465
T +IH S GDIL F+ G E+IE L++ + + +++I P++ +LP++ Q
Sbjct: 680 TVFQIHVSQGPGDILVFLTGQEEIEAAEQSLQETARKLGNKIPEMIICPIYANLPSDLQA 739
Query: 466 KVFRPTPRAMRKIVIATNIAETSITIPGIVYVIDPGFVKARWFNPNTLTNSLVVVPISK 524
K+F PTP RK+V+ATNIAETS+TI GIVYVIDPGFVK FNP T SLVV P S+
Sbjct: 740 KIFEPTPPKARKVVLATNIAETSLTIDGIVYVIDPGFVKENVFNPRTGMESLVVTPCSR 798
Score = 296 (109.3 bits), Expect = 5.9e-36, Sum P(2) = 5.9e-36
Identities = 58/109 (53%), Positives = 81/109 (74%)
Query: 587 QYLLEAGWCYDTKLIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTK 646
QYL EAG+ + +G T+PRR++ S+A RV+EE+ LG+ VGY+IRF+D T D T
Sbjct: 516 QYLHEAGYTKNGMKVGCTQPRRVAAMSVAARVAEEMGVKLGNEVGYSIRFED-NTSDKTV 574
Query: 647 IKYMTEGILMREMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKILK 695
+KYMT+G+L+RE++T+P L +YS +M+DE HERT+ TDI GLLK I K
Sbjct: 575 LKYMTDGMLLRELLTEPDLGQYSALMIDEAHERTVPTDIACGLLKDIAK 623
Score = 240 (89.5 bits), Expect = 5.4e-34, Sum P(3) = 5.4e-34
Identities = 51/100 (51%), Positives = 69/100 (69%)
Query: 43 KFSRLYTE-ASFSQLNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRVA 101
K RLYT+ A +++L E T PE+QRT LSS +L LK+LGI +L F F PPPA+ + A
Sbjct: 815 KCFRLYTKWAYYNELEESTTPEIQRTNLSSVILMLKSLGIDQLLEFDFMDPPPAETIIRA 874
Query: 102 LELLYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLLSS 141
LE LY+LGA++ G LTK +G MAE P P+ AK +L++
Sbjct: 875 LEQLYALGALNDRGELTK-IGRQMAEFPTDPMLAKAILAA 913
Score = 183 (69.5 bits), Expect = 4.2e-49, Sum P(4) = 4.2e-49
Identities = 52/163 (31%), Positives = 84/163 (51%)
Query: 689 LLKKILK-DKERDFECSDEIASILSLL-QVQDIFIKPSSGALSLKARVLRRNFEVEQG-D 745
L K IL DK C +E+ SI+S+L + +F +P + A R F V+ G D
Sbjct: 906 LAKAILAADKHG---CVEEVLSIVSMLGEASALFFRPKDK--KIHADSARNRFTVKDGGD 960
Query: 746 LLTLLNIFKFYEKQENKKQFCHKYFFNYKVLKRAAELKNQMILLLKKSSIPLVT-SPRNT 804
LTLLNI+ + + + + F + L RA ++++Q+ L + + + + N
Sbjct: 961 HLTLLNIWNQWVDSDFSYVWAKENFLQQRSLTRARDVRDQLAKLCDRVEVTVSSCGSNNI 1020
Query: 805 NAVLKCLTNGFFSNAAYLHYSG-VYRTVRGNEDLYIHPSSVLY 846
+ K +T GFF NAA L G YRT++ + +Y+HPSS L+
Sbjct: 1021 VPIQKAITAGFFPNAARLQRGGDSYRTIKTGQTVYLHPSSTLF 1063
Score = 88 (36.0 bits), Expect = 4.2e-49, Sum P(4) = 4.2e-49
Identities = 16/36 (44%), Positives = 26/36 (72%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDI 36
MT+G+L+ +P + +YS +M+D+ HERT+ TDI
Sbjct: 578 MTDGMLLRELLTEPDLGQYSALMIDEAHERTVPTDI 613
Score = 44 (20.5 bits), Expect = 5.2e-13, Sum P(4) = 5.2e-13
Identities = 10/17 (58%), Positives = 11/17 (64%)
Query: 436 GILKQYHNQREDLKLLI 452
G+LK R DLKLLI
Sbjct: 616 GLLKDIAKARPDLKLLI 632
Score = 38 (18.4 bits), Expect = 4.2e-49, Sum P(4) = 4.2e-49
Identities = 9/23 (39%), Positives = 14/23 (60%)
Query: 653 GILMREMMTDPLLRKYSVIMLDE 675
G M E TDP+L K +++ D+
Sbjct: 894 GRQMAEFPTDPMLAK-AILAADK 915
>WB|WBGene00003393 [details] [associations]
symbol:mog-5 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0040011 "locomotion"
evidence=IMP] [GO:0018996 "molting cycle, collagen and
cuticulin-based cuticle" evidence=IMP] [GO:0002009 "morphogenesis
of an epithelium" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0042127
"regulation of cell proliferation" evidence=IMP] [GO:0040020
"regulation of meiosis" evidence=IMP] [GO:0007281 "germ cell
development" evidence=IMP] [GO:0006915 "apoptotic process"
evidence=IMP] [GO:0048589 "developmental growth" evidence=IMP]
[GO:0010172 "embryonic body morphogenesis" evidence=IMP]
[GO:0040022 "feminization of hermaphroditic germ-line"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0002009 GO:GO:0006915
GO:GO:0002119 GO:GO:0008380 GO:GO:0018996 GO:GO:0006397
GO:GO:0040011 GO:GO:0003723 GO:GO:0042127 GO:GO:0007281
GO:GO:0048589 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
GO:GO:0010172 GO:GO:0040020 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0040022 GO:GO:0008026 EMBL:FO081042 HOGENOM:HOG000175261
InterPro:IPR022967 SMART:SM00316 GeneTree:ENSGT00700000104241
KO:K12818 OMA:NAWCYEN EMBL:AF286899 PIR:T15921 RefSeq:NP_495019.1
UniGene:Cel.7556 ProteinModelPortal:Q09530 SMR:Q09530
DIP:DIP-25759N IntAct:Q09530 MINT:MINT-1046882 STRING:Q09530
PaxDb:Q09530 EnsemblMetazoa:EEED8.5 GeneID:173920
KEGG:cel:CELE_EEED8.5 UCSC:EEED8.5 CTD:173920 WormBase:EEED8.5
InParanoid:Q09530 NextBio:881669 Uniprot:Q09530
Length = 1200
Score = 375 (137.1 bits), Expect = 6.0e-49, Sum P(2) = 6.0e-49
Identities = 96/289 (33%), Positives = 157/289 (54%)
Query: 239 EMGVGDKARPTIVRSSIDVACSCTVVEFLTEMGCRMDFEYISRGYMFRKGRMKILVSKIF 298
E G+G + + + VA E GC++ + GY R + I
Sbjct: 579 EAGLGRRGKIGCTQPR-RVAAMSVAKRVAEEYGCKLGTDV---GYTIRFEDCTSQDTIIK 634
Query: 299 KMSQGKP-SDSGVEPISQSYLVELSILAPGGQDVIGEDMKAFAEQLKPLKRTQLKLIISS 357
M+ G + ++P Y L +L + I D+ + KR +LKLII+S
Sbjct: 635 YMTDGMLLRECLIDPDLSGY--SLIMLDEAHERTIHTDVLFGLLKAAARKRPELKLIITS 692
Query: 358 ATVDAEEICQFYNISASSNATILSVKGHLYPVSVYYSNDPVVNYVQGVVDTAIKIHESMP 417
AT+D+ + +++ A I ++ G +PV + Y+ +P +Y++ T ++IH + P
Sbjct: 693 ATLDSVKFSEYF-----LEAPIFTIPGRTFPVEILYTREPESDYLEAAHITVMQIHLTEP 747
Query: 418 VGDILAFVIGLEQIEHIIGIL-KQYHNQREDL-KLLILPMHGSLPNNEQIKVFRPTPRAM 475
GD+L F+ G E+I+ +L ++ + D+ +L+ILP++G+LP+ Q ++F P P
Sbjct: 748 PGDVLVFLTGQEEIDTSCEVLYERMKSMGPDVPELIILPVYGALPSEMQTRIFDPAPAGK 807
Query: 476 RKIVIATNIAETSITIPGIVYVIDPGFVKARWFNPNTLTNSLVVVPISK 524
RK+VIATNIAETS+TI GI YV+DPGFVK + +NP + +SLVV PIS+
Sbjct: 808 RKVVIATNIAETSLTIDGIFYVVDPGFVKQKIYNPKSGMDSLVVTPISQ 856
Score = 301 (111.0 bits), Expect = 7.8e-41, Sum P(2) = 7.8e-41
Identities = 63/105 (60%), Positives = 78/105 (74%)
Query: 587 QYLLEAGWCYDTKLIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTK 646
QY +EAG K IG T+PRR++ S+A RV+EE LG VGYTIRF+DCT++D T
Sbjct: 575 QYAIEAGLGRRGK-IGCTQPRRVAAMSVAKRVAEEYGCKLGTDVGYTIRFEDCTSQD-TI 632
Query: 647 IKYMTEGILMREMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLK 691
IKYMT+G+L+RE + DP L YS+IMLDE HERTI TD+L GLLK
Sbjct: 633 IKYMTDGMLLRECLIDPDLSGYSLIMLDEAHERTIHTDVLFGLLK 677
Score = 225 (84.3 bits), Expect = 6.0e-49, Sum P(2) = 6.0e-49
Identities = 46/153 (30%), Positives = 87/153 (56%)
Query: 700 DFECSDEIASILSLLQVQDIFIKPSSGALSLKARVLRRNFEVEQGDLLTLLNIFKFYEKQ 759
D CS+E+ +I+++L VQ+IF +P + + F +GD LTLL ++ ++
Sbjct: 973 DLGCSEEVLTIVAMLNVQNIFYRPKEKQDHADQK--KAKFHQPEGDHLTLLAVYNSWKNH 1030
Query: 760 ENKKQFCHKYFFNYKVLKRAAELKNQMILLLKKSSIPLVTSPRNTNAVLKCLTNGFFSNA 819
+ +C + F + +KRA +++ Q++ ++ + + +V+ R+ + V K + +GFF NA
Sbjct: 1031 HFSQPWCFENFIQVRSMKRAQDIRKQLLGIMDRHKLLMVSCGRDVSRVQKAICSGFFRNA 1090
Query: 820 AYLHYSGVYRTVRGNEDLYIHPSSVLYTLQQPQ 852
A YRT+ +++YIHPSS + QQP+
Sbjct: 1091 AKRDPQEGYRTLTDGQNVYIHPSSACFQ-QQPE 1122
Score = 216 (81.1 bits), Expect = 7.7e-19, Sum P(2) = 7.7e-19
Identities = 55/132 (41%), Positives = 77/132 (58%)
Query: 43 KFSRLYTEASFSQLNECTP-PEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRVA 101
K RLYTE +F TP PE+QRT L+S +LQLKA+GI+N++ F F PP ++ A
Sbjct: 873 KCYRLYTERAFRDEMLPTPVPEIQRTNLASTLLQLKAMGINNLIDFDFMDAPPLDSMITA 932
Query: 102 LELLYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLLSSGSVLDSAVEILLHRLRGLCD 161
L L++L A+D +G LTK +G MAE PL P +K+L+ S L + E+L
Sbjct: 933 LNTLHTLSALDGDGLLTK-LGRRMAEFPLEPSLSKLLIMSVD-LGCSEEVLTIVAMLNVQ 990
Query: 162 NVDSGPETFHDH 173
N+ P+ DH
Sbjct: 991 NIFYRPKEKQDH 1002
Score = 103 (41.3 bits), Expect = 7.7e-19, Sum P(2) = 7.7e-19
Identities = 20/37 (54%), Positives = 27/37 (72%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDIL 37
MT+G+L+ DP + YS+IMLD+ HERTI TD+L
Sbjct: 636 MTDGMLLRECLIDPDLSGYSLIMLDEAHERTIHTDVL 672
Score = 37 (18.1 bits), Expect = 9.9e-19, Sum P(3) = 9.9e-19
Identities = 7/27 (25%), Positives = 16/27 (59%)
Query: 137 VLLSSGSVLDSAVEILLHRLRGLCDNV 163
V L+ +D++ E+L R++ + +V
Sbjct: 753 VFLTGQEEIDTSCEVLYERMKSMGPDV 779
>UNIPROTKB|Q09530 [details] [associations]
symbol:mog-5 "Probable pre-mRNA-splicing factor
ATP-dependent RNA helicase mog-5" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0002009 GO:GO:0006915
GO:GO:0002119 GO:GO:0008380 GO:GO:0018996 GO:GO:0006397
GO:GO:0040011 GO:GO:0003723 GO:GO:0042127 GO:GO:0007281
GO:GO:0048589 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
GO:GO:0010172 GO:GO:0040020 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0040022 GO:GO:0008026 EMBL:FO081042 HOGENOM:HOG000175261
InterPro:IPR022967 SMART:SM00316 GeneTree:ENSGT00700000104241
KO:K12818 OMA:NAWCYEN EMBL:AF286899 PIR:T15921 RefSeq:NP_495019.1
UniGene:Cel.7556 ProteinModelPortal:Q09530 SMR:Q09530
DIP:DIP-25759N IntAct:Q09530 MINT:MINT-1046882 STRING:Q09530
PaxDb:Q09530 EnsemblMetazoa:EEED8.5 GeneID:173920
KEGG:cel:CELE_EEED8.5 UCSC:EEED8.5 CTD:173920 WormBase:EEED8.5
InParanoid:Q09530 NextBio:881669 Uniprot:Q09530
Length = 1200
Score = 375 (137.1 bits), Expect = 6.0e-49, Sum P(2) = 6.0e-49
Identities = 96/289 (33%), Positives = 157/289 (54%)
Query: 239 EMGVGDKARPTIVRSSIDVACSCTVVEFLTEMGCRMDFEYISRGYMFRKGRMKILVSKIF 298
E G+G + + + VA E GC++ + GY R + I
Sbjct: 579 EAGLGRRGKIGCTQPR-RVAAMSVAKRVAEEYGCKLGTDV---GYTIRFEDCTSQDTIIK 634
Query: 299 KMSQGKP-SDSGVEPISQSYLVELSILAPGGQDVIGEDMKAFAEQLKPLKRTQLKLIISS 357
M+ G + ++P Y L +L + I D+ + KR +LKLII+S
Sbjct: 635 YMTDGMLLRECLIDPDLSGY--SLIMLDEAHERTIHTDVLFGLLKAAARKRPELKLIITS 692
Query: 358 ATVDAEEICQFYNISASSNATILSVKGHLYPVSVYYSNDPVVNYVQGVVDTAIKIHESMP 417
AT+D+ + +++ A I ++ G +PV + Y+ +P +Y++ T ++IH + P
Sbjct: 693 ATLDSVKFSEYF-----LEAPIFTIPGRTFPVEILYTREPESDYLEAAHITVMQIHLTEP 747
Query: 418 VGDILAFVIGLEQIEHIIGIL-KQYHNQREDL-KLLILPMHGSLPNNEQIKVFRPTPRAM 475
GD+L F+ G E+I+ +L ++ + D+ +L+ILP++G+LP+ Q ++F P P
Sbjct: 748 PGDVLVFLTGQEEIDTSCEVLYERMKSMGPDVPELIILPVYGALPSEMQTRIFDPAPAGK 807
Query: 476 RKIVIATNIAETSITIPGIVYVIDPGFVKARWFNPNTLTNSLVVVPISK 524
RK+VIATNIAETS+TI GI YV+DPGFVK + +NP + +SLVV PIS+
Sbjct: 808 RKVVIATNIAETSLTIDGIFYVVDPGFVKQKIYNPKSGMDSLVVTPISQ 856
Score = 301 (111.0 bits), Expect = 7.8e-41, Sum P(2) = 7.8e-41
Identities = 63/105 (60%), Positives = 78/105 (74%)
Query: 587 QYLLEAGWCYDTKLIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTK 646
QY +EAG K IG T+PRR++ S+A RV+EE LG VGYTIRF+DCT++D T
Sbjct: 575 QYAIEAGLGRRGK-IGCTQPRRVAAMSVAKRVAEEYGCKLGTDVGYTIRFEDCTSQD-TI 632
Query: 647 IKYMTEGILMREMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLK 691
IKYMT+G+L+RE + DP L YS+IMLDE HERTI TD+L GLLK
Sbjct: 633 IKYMTDGMLLRECLIDPDLSGYSLIMLDEAHERTIHTDVLFGLLK 677
Score = 225 (84.3 bits), Expect = 6.0e-49, Sum P(2) = 6.0e-49
Identities = 46/153 (30%), Positives = 87/153 (56%)
Query: 700 DFECSDEIASILSLLQVQDIFIKPSSGALSLKARVLRRNFEVEQGDLLTLLNIFKFYEKQ 759
D CS+E+ +I+++L VQ+IF +P + + F +GD LTLL ++ ++
Sbjct: 973 DLGCSEEVLTIVAMLNVQNIFYRPKEKQDHADQK--KAKFHQPEGDHLTLLAVYNSWKNH 1030
Query: 760 ENKKQFCHKYFFNYKVLKRAAELKNQMILLLKKSSIPLVTSPRNTNAVLKCLTNGFFSNA 819
+ +C + F + +KRA +++ Q++ ++ + + +V+ R+ + V K + +GFF NA
Sbjct: 1031 HFSQPWCFENFIQVRSMKRAQDIRKQLLGIMDRHKLLMVSCGRDVSRVQKAICSGFFRNA 1090
Query: 820 AYLHYSGVYRTVRGNEDLYIHPSSVLYTLQQPQ 852
A YRT+ +++YIHPSS + QQP+
Sbjct: 1091 AKRDPQEGYRTLTDGQNVYIHPSSACFQ-QQPE 1122
Score = 216 (81.1 bits), Expect = 7.7e-19, Sum P(2) = 7.7e-19
Identities = 55/132 (41%), Positives = 77/132 (58%)
Query: 43 KFSRLYTEASFSQLNECTP-PEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRVA 101
K RLYTE +F TP PE+QRT L+S +LQLKA+GI+N++ F F PP ++ A
Sbjct: 873 KCYRLYTERAFRDEMLPTPVPEIQRTNLASTLLQLKAMGINNLIDFDFMDAPPLDSMITA 932
Query: 102 LELLYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLLSSGSVLDSAVEILLHRLRGLCD 161
L L++L A+D +G LTK +G MAE PL P +K+L+ S L + E+L
Sbjct: 933 LNTLHTLSALDGDGLLTK-LGRRMAEFPLEPSLSKLLIMSVD-LGCSEEVLTIVAMLNVQ 990
Query: 162 NVDSGPETFHDH 173
N+ P+ DH
Sbjct: 991 NIFYRPKEKQDH 1002
Score = 103 (41.3 bits), Expect = 7.7e-19, Sum P(2) = 7.7e-19
Identities = 20/37 (54%), Positives = 27/37 (72%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDIL 37
MT+G+L+ DP + YS+IMLD+ HERTI TD+L
Sbjct: 636 MTDGMLLRECLIDPDLSGYSLIMLDEAHERTIHTDVL 672
Score = 37 (18.1 bits), Expect = 9.9e-19, Sum P(3) = 9.9e-19
Identities = 7/27 (25%), Positives = 16/27 (59%)
Query: 137 VLLSSGSVLDSAVEILLHRLRGLCDNV 163
V L+ +D++ E+L R++ + +V
Sbjct: 753 VFLTGQEEIDTSCEVLYERMKSMGPDV 779
>CGD|CAL0000153 [details] [associations]
symbol:orf19.1687 species:5476 "Candida albicans" [GO:0030686
"90S preribosome" evidence=IEA] [GO:0071014 "post-mRNA release
spliceosomal complex" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000463 "maturation of LSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000390 "spliceosomal complex disassembly" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
CGD:CAL0000153 GO:GO:0005524 GO:GO:0003676 EMBL:AACQ01000014
EMBL:AACQ01000013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 KO:K12820 RefSeq:XP_721644.1
RefSeq:XP_721764.1 STRING:Q5AJA5 GeneID:3636669 GeneID:3636709
KEGG:cal:CaO19.1687 KEGG:cal:CaO19.9255 Uniprot:Q5AJA5
Length = 767
Score = 346 (126.9 bits), Expect = 8.3e-49, Sum P(3) = 8.3e-49
Identities = 79/190 (41%), Positives = 117/190 (61%)
Query: 346 LKRTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYYSNDPVVNYVQGV 405
++R LK+II SAT+DAE+ ++N NA +L+V G +PV +YY+ + +Y+
Sbjct: 237 VRRPDLKIIIMSATLDAEKFQNYFN-----NAPLLAVPGRTHPVEIYYTPEFQRDYLDAA 291
Query: 406 VDTAIKIHESMPVGDILAFVIGLEQIEHIIGILKQYHNQ--REDL--KLLILPMHGSLPN 461
+ T ++IH + GDIL F+ G E+IE + ++ RE L + P++GSLP
Sbjct: 292 IRTVLQIHATEGEGDILLFLTGEEEIEDACRKISLEGDELVREQNCGPLKVYPLYGSLPP 351
Query: 462 NEQIKVFRPTP-------RAMRKIVIATNIAETSITIPGIVYVIDPGFVKARWFNPNTLT 514
++Q K+F P P R RK++I+TNIAETS+TI GIVYV+DPGF K + +NP
Sbjct: 352 HQQQKIFEPAPTNPNPNGRPGRKVIISTNIAETSLTIDGIVYVVDPGFSKQKVYNPRVRV 411
Query: 515 NSLVVVPISK 524
SL+V PISK
Sbjct: 412 ESLLVSPISK 421
Score = 245 (91.3 bits), Expect = 1.2e-31, Sum P(2) = 1.2e-31
Identities = 49/95 (51%), Positives = 69/95 (72%)
Query: 599 KLIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTKIKYMTEGILMRE 658
K + T+PRR++ S+A RV++E+ LG VGY IRF++ + T +KYMT+G+L+RE
Sbjct: 142 KQVACTQPRRVAAMSVAARVADEMDVELGEEVGYNIRFEN-NSGPKTILKYMTDGMLLRE 200
Query: 659 MMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKI 693
M D L +YS I+LDE HERT+ TDILMGLLK++
Sbjct: 201 AMEDHDLTRYSCIILDEAHERTLATDILMGLLKQV 235
Score = 190 (71.9 bits), Expect = 8.3e-49, Sum P(3) = 8.3e-49
Identities = 48/156 (30%), Positives = 84/156 (53%)
Query: 701 FECSDEIASILSLLQVQDIFIKPSSGALSLKARVLRRNFEVEQGDLLTLLNIFKFYEKQE 760
+ CS+EI +I+++L V ++F++P+S +A + +F GD LTL+N+++ + E
Sbjct: 539 YSCSEEILTIVAMLSVPNVFVRPASARK--RADEAKLSFAQADGDHLTLINVYEAFISPE 596
Query: 761 NKKQFCHKY----FFNYKVLKRAAELKNQMILLLKKSSIPLVTSPRNTNA------VLKC 810
+ HK+ F +Y+ L A ++NQ+ L++K + L++ + V K
Sbjct: 597 ASEIGTHKWCRDNFLSYRSLTSAKNVRNQLQRLMQKYDLQLISQYNQVSEFEYWENVKKA 656
Query: 811 LTNGFFSNAAYLHYSGV-YRTVRGNEDLYIHPSSVL 845
L GFF A Y TV+ N+D+ IHPS+VL
Sbjct: 657 LVAGFFMQVAKKKSGNKGYLTVKDNQDVLIHPSTVL 692
Score = 166 (63.5 bits), Expect = 8.0e-29, Sum P(3) = 8.0e-29
Identities = 41/100 (41%), Positives = 60/100 (60%)
Query: 43 KFSRLYTEASFS-QLNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRVA 101
K RLYTE +F +L E + PE+ R+ LSS VL+LK LGI +++ F F PP + + A
Sbjct: 438 KCFRLYTEEAFKKELIEQSYPEILRSNLSSTVLELKKLGIDDLVHFDFMDPPAPETMMRA 497
Query: 102 LELLYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLLSS 141
LE L L + G+LT +G ++ PL P+ A +L+ S
Sbjct: 498 LEELNYLQCLSDEGDLTA-LGRLASQFPLDPMLAVMLIGS 536
Score = 101 (40.6 bits), Expect = 8.3e-49, Sum P(3) = 8.3e-49
Identities = 22/47 (46%), Positives = 33/47 (70%)
Query: 1 MTEGILIEN--DDHDPSVEKYSVIMLDKVHERTIFTDILMECSRKFS 45
MT+G+L+ +DHD + +YS I+LD+ HERT+ TDILM ++ S
Sbjct: 192 MTDGMLLREAMEDHD--LTRYSCIILDEAHERTLATDILMGLLKQVS 236
Score = 50 (22.7 bits), Expect = 4.5e-11, Sum P(2) = 4.5e-11
Identities = 9/20 (45%), Positives = 16/20 (80%)
Query: 434 IIGILKQYHNQREDLKLLIL 453
++G+LKQ +R DLK++I+
Sbjct: 228 LMGLLKQVSVRRPDLKIIIM 247
>SGD|S000001794 [details] [associations]
symbol:PRP16 "DEAH-box RNA helicase involved in second
catalytic step of splicing" species:4932 "Saccharomyces cerevisiae"
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0000350 "generation of catalytic
spliceosome for second transesterification step" evidence=IMP]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0071007 "U2-type catalytic step 2 spliceosome" evidence=IDA]
[GO:0008186 "RNA-dependent ATPase activity" evidence=IDA]
[GO:0000386 "second spliceosomal transesterification activity"
evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 SGD:S000001794 GO:GO:0005524 GO:GO:0003676
EMBL:BK006944 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 GO:GO:0071007 EMBL:Z27116 GO:GO:0008186
RefSeq:NP_013012.3 GeneID:853961 KEGG:sce:YKR086W KO:K12815
GO:GO:0000350 GeneTree:ENSGT00700000104877 OrthoDB:EOG4GQTD2
EMBL:M31524 EMBL:Z28311 PIR:S38164 RefSeq:NP_013014.3
ProteinModelPortal:P15938 SMR:P15938 DIP:DIP-2824N IntAct:P15938
MINT:MINT-1699731 STRING:P15938 PaxDb:P15938 PeptideAtlas:P15938
EnsemblFungi:YKR086W GeneID:853963 KEGG:sce:YKR088C CYGD:YKR086w
OMA:IDCGYSK NextBio:975386 Genevestigator:P15938 GermOnline:YKR086W
Uniprot:P15938
Length = 1071
Score = 317 (116.6 bits), Expect = 1.3e-48, Sum P(3) = 1.3e-48
Identities = 77/191 (40%), Positives = 115/191 (60%)
Query: 347 KRTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYYSNDPVVNYVQGVV 406
+R LKLII+SAT++A++ F+ NA ++ G +PV Y+++PV +YV+ V
Sbjct: 495 RRRDLKLIITSATMNAKKFSAFFG-----NAPQFTIPGRTFPVQTIYTSNPVQDYVEAAV 549
Query: 407 DTAIKIH--ESMPVGDILAFVIGLEQIEHIIGILK----QYHNQR------EDLK-LLIL 453
A+KIH GDIL F+ G E IE L+ Q ++++ E++ + IL
Sbjct: 550 SQAVKIHLANDCSSGDILIFMTGQEDIETTFDTLQEKFLQVYSKKFGTANFEEINDIEIL 609
Query: 454 PMHGSLPNNEQIKVFRPTPRAMRKIVIATNIAETSITIPGIVYVIDPGFVKARWFNPNTL 513
P++ +LP + Q K+F+ RKI+IATNIAETS+TI GI YVID G+ K + +NP
Sbjct: 610 PIYSALPADLQFKIFQDLHGTKRKIIIATNIAETSLTIKGIRYVIDCGYSKLKVYNPKIG 669
Query: 514 TNSLVVVPISK 524
+SLV+ PISK
Sbjct: 670 LDSLVITPISK 680
Score = 283 (104.7 bits), Expect = 2.8e-40, Sum P(2) = 2.8e-40
Identities = 56/117 (47%), Positives = 82/117 (70%)
Query: 587 QYLLEAGWCYDT-KLIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVT 645
QYL E G+ D K I +T+PRR++ S+A RV+ E++ LG VGY+IRF+D T + T
Sbjct: 385 QYLYEEGYANDRGKSIVVTQPRRVAAISVAKRVAMEMQVPLGKEVGYSIRFEDVTDSECT 444
Query: 646 KIKYMTEGILMREMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKILKDKERDFE 702
K+K++T+GIL+RE + D L KYS +++DE HER++ TDIL+G K IL + RD +
Sbjct: 445 KLKFVTDGILLRETLLDDTLDKYSCVIIDEAHERSLNTDILLGFFK-ILLARRRDLK 500
Score = 237 (88.5 bits), Expect = 1.3e-48, Sum P(3) = 1.3e-48
Identities = 51/159 (32%), Positives = 91/159 (57%)
Query: 690 LKKILKDKERDFECSDEIASILSLLQVQDIFIKPSSGALSLKARVLRRNFEVEQGDLLTL 749
L KIL R+ CSDE+ +I+S+L V +F +P +A + R F + + D LTL
Sbjct: 789 LSKILLIAVRN-GCSDEMLTIVSMLSVPQVFYRPKER--QKEADIARNKFFIAKSDHLTL 845
Query: 750 LNIFKFYEKQENKKQFCHKYFFNYKVLKRAAELKNQMILLLKKSSIPLVTSPRNTNAVLK 809
LN+F+ + +C+K+F YK L RA ++++Q++ +LK IP+++S ++ + + K
Sbjct: 846 LNVFEQWRANNFSSHWCNKHFVQYKSLVRARDIRDQLLTILKSQKIPVISSGKDWDIIKK 905
Query: 810 CLTNGFFSNAAYLHYSGVYRTVRGNEDLYIHPSSVLYTL 848
C+ +GF AA + Y ++ + +HP+S L+ L
Sbjct: 906 CICSGFAHQAAKITGLRNYVHLKTGVSVQLHPTSALHGL 944
Score = 170 (64.9 bits), Expect = 7.9e-33, Sum P(3) = 7.9e-33
Identities = 42/96 (43%), Positives = 61/96 (63%)
Query: 46 RLYTEASFSQ-LNECTPPEMQRTELSSAVLQLKALGIHNIL-RFSFPSPPPAQNLRVALE 103
RLYTE +F + + T PE+QRT LS+ +L LK+L + + L +F F PP Q +L
Sbjct: 700 RLYTEDTFKEDMYLQTIPEIQRTNLSNTLLLLKSLDVTDELSKFPFIDKPPLQTFLSSLY 759
Query: 104 LLYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLL 139
L+ +GA+D +G LT P+G MA+ PL P +K+LL
Sbjct: 760 ELWFIGAIDTSGQLT-PLGLQMAKFPLQPSLSKILL 794
Score = 92 (37.4 bits), Expect = 1.3e-48, Sum P(3) = 1.3e-48
Identities = 16/38 (42%), Positives = 29/38 (76%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILM 38
+T+GIL+ D +++KYS +++D+ HER++ TDIL+
Sbjct: 449 VTDGILLRETLLDDTLDKYSCVIIDEAHERSLNTDILL 486
Score = 37 (18.1 bits), Expect = 4.3e-19, Sum P(3) = 4.3e-19
Identities = 8/19 (42%), Positives = 12/19 (63%)
Query: 434 IIGILKQYHNQREDLKLLI 452
++G K +R DLKL+I
Sbjct: 485 LLGFFKILLARRRDLKLII 503
>POMBASE|SPAC10F6.02c [details] [associations]
symbol:prp22 "ATP-dependent RNA helicase Prp22"
species:4896 "Schizosaccharomyces pombe" [GO:0000390 "spliceosomal
complex disassembly" evidence=ISS] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005681 "spliceosomal complex"
evidence=ISS] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
PomBase:SPAC10F6.02c GO:GO:0005524 EMBL:CU329670
GenomeReviews:CU329670_GR GO:GO:0005681 GO:GO:0003723
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 HOGENOM:HOG000175261
InterPro:IPR022967 SMART:SM00316 GO:GO:0000390 KO:K12818
OMA:NAWCYEN PIR:T37496 RefSeq:NP_593253.1 ProteinModelPortal:O42643
IntAct:O42643 STRING:O42643 PRIDE:O42643
EnsemblFungi:SPAC10F6.02c.1 GeneID:2542978 KEGG:spo:SPAC10F6.02c
OrthoDB:EOG45TGW9 NextBio:20804011 Uniprot:O42643
Length = 1168
Score = 383 (139.9 bits), Expect = 1.7e-48, Sum P(2) = 1.7e-48
Identities = 98/271 (36%), Positives = 144/271 (53%)
Query: 257 VACSCTVVEFLTEMGCRMDFEYISRGYMFRKGRMKILVSKIFKMSQGK-PSDSGVEPISQ 315
VA E+GCR+ E GY R +++I M+ G + V+P+
Sbjct: 567 VAAMSVAKRVAEEVGCRVGEEV---GYTIRFEDKTSRMTQIKYMTDGMLQRECLVDPLLS 623
Query: 316 SYLVELSILAPGGQDVIGEDMKAFAEQLKPLKRTQLKLIISSATVDAEEICQFYNISASS 375
Y V IL + + D+ + LKR LKLI++SAT+DAE ++
Sbjct: 624 KYSV--IILDEAHERTVATDVLFGLLKGTVLKRPDLKLIVTSATLDAERFSSYFY----- 676
Query: 376 NATILSVKGHLYPVSVYYSNDPVVNYVQGVVDTAIKIHESMPVGDILAFVIGLEQIEHII 435
I ++ G YPV + Y+ P +Y+ + T ++IH S GDIL F+ G E+I+
Sbjct: 677 KCPIFTIPGRSYPVEIMYTKQPEADYLDAALMTVMQIHLSEGPGDILVFLTGQEEIDTSC 736
Query: 436 GILKQYHNQREDL--KLLILPMHGSLPNNEQIKVFRPTPRAMRKIVIATNIAETSITIPG 493
IL + D +L+ILP++ +LP+ Q ++F P P RK+VIATNIAETS+TI G
Sbjct: 737 EILYERSKMLGDSIPELVILPVYSALPSEIQSRIFEPAPPGGRKVVIATNIAETSLTIDG 796
Query: 494 IVYVIDPGFVKARWFNPNTLTNSLVVVPISK 524
I YV+DPGFVK F+P +SL+V PIS+
Sbjct: 797 IYYVVDPGFVKQSCFDPKLGMDSLIVTPISQ 827
Score = 325 (119.5 bits), Expect = 4.0e-42, Sum P(2) = 4.0e-42
Identities = 64/110 (58%), Positives = 85/110 (77%)
Query: 587 QYLLEAGWCYDTKLIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTK 646
QYL E G+ D+K+IG T+PRR++ S+A RV+EE+ +G VGYTIRF+D T+ +T+
Sbjct: 545 QYLAEEGYTSDSKMIGCTQPRRVAAMSVAKRVAEEVGCRVGEEVGYTIRFEDKTSR-MTQ 603
Query: 647 IKYMTEGILMREMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLK-KILK 695
IKYMT+G+L RE + DPLL KYSVI+LDE HERT+ TD+L GLLK +LK
Sbjct: 604 IKYMTDGMLQRECLVDPLLSKYSVIILDEAHERTVATDVLFGLLKGTVLK 653
Score = 221 (82.9 bits), Expect = 4.1e-36, Sum P(3) = 4.1e-36
Identities = 49/102 (48%), Positives = 68/102 (66%)
Query: 43 KFSRLYTEASFSQLNECTP---PEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLR 99
K RLYTE+++ NE P PE+QR LS +L LKA+GI+++L F F PPPAQ +
Sbjct: 844 KCYRLYTESAYR--NEMLPSPIPEIQRQNLSHTILMLKAMGINDLLNFDFMDPPPAQTMI 901
Query: 100 VALELLYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLLSS 141
AL+ LY+L A+D G LT P+G MA+ P+ P +KVL++S
Sbjct: 902 AALQNLYALSALDDEGLLT-PLGRKMADFPMEPQLSKVLITS 942
Score = 212 (79.7 bits), Expect = 1.7e-48, Sum P(2) = 1.7e-48
Identities = 46/158 (29%), Positives = 89/158 (56%)
Query: 690 LKKILKDKERDFECSDEIASILSLLQVQDIFIKPSSGALSLKARVLRRNFEVEQGDLLTL 749
L K+L + CS+E+ SI+++L V +I+ +P +A R F + D LTL
Sbjct: 935 LSKVLITSV-ELGCSEEMLSIIAMLSVPNIWSRPREK--QQEADRQRAQFANPESDHLTL 991
Query: 750 LNIFKFYEKQENKKQFCHKYFFNYKVLKRAAELKNQMILLLKKSSIPLVTSPRNTNAVLK 809
LN++ ++ +C++++ + ++RA +++ Q+I L+ + P+V+ R +L+
Sbjct: 992 LNVYTTWKMNRCSDNWCYEHYIQARGMRRAEDVRKQLIRLMDRYRHPVVSCGRKRELILR 1051
Query: 810 CLTNGFFSNAAYLH-YSGVYRTVRGNEDLYIHPSSVLY 846
L +G+F+N A + G Y+T+ N +Y+HPS VL+
Sbjct: 1052 ALCSGYFTNVAKRDSHEGCYKTIVENAPVYMHPSGVLF 1089
Score = 100 (40.3 bits), Expect = 4.1e-36, Sum P(3) = 4.1e-36
Identities = 20/37 (54%), Positives = 27/37 (72%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDIL 37
MT+G+L DP + KYSVI+LD+ HERT+ TD+L
Sbjct: 607 MTDGMLQRECLVDPLLSKYSVIILDEAHERTVATDVL 643
Score = 40 (19.1 bits), Expect = 2.2e-17, Sum P(3) = 2.2e-17
Identities = 13/43 (30%), Positives = 21/43 (48%)
Query: 125 MAEMPLH----PIHAKVLLSSGSVLDSAVEILLHRLRGLCDNV 163
M M +H P V L+ +D++ EIL R + L D++
Sbjct: 708 MTVMQIHLSEGPGDILVFLTGQEEIDTSCEILYERSKMLGDSI 750
Score = 39 (18.8 bits), Expect = 2.8e-17, Sum P(3) = 2.8e-17
Identities = 12/40 (30%), Positives = 19/40 (47%)
Query: 229 PYQLRYIGQPEMGVGDKARPTIVRSSIDVACSCTVVEFLT 268
P ++ Y QPE D A T+++ + +V FLT
Sbjct: 689 PVEIMYTKQPEADYLDAALMTVMQIHLSEGPGDILV-FLT 727
>UNIPROTKB|G4NFJ0 [details] [associations]
symbol:MGG_08807 "Pre-mRNA-splicing factor ATP-dependent
RNA helicase prp22" species:242507 "Magnaporthe oryzae 70-15"
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003029 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 EMBL:CM001236 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
InterPro:IPR022967 SMART:SM00316 KO:K12818 RefSeq:XP_003719164.1
ProteinModelPortal:G4NFJ0 EnsemblFungi:MGG_08807T0 GeneID:2678973
KEGG:mgr:MGG_08807 Uniprot:G4NFJ0
Length = 1207
Score = 368 (134.6 bits), Expect = 2.8e-48, Sum P(2) = 2.8e-48
Identities = 95/260 (36%), Positives = 142/260 (54%)
Query: 269 EMGCRMDFEYISRGYMFRKGRMKILVSKIFKMSQGK-PSDSGVEPISQSYLVELSILAPG 327
E+GC + E GY R ++I M+ G + ++P + Y V + L
Sbjct: 610 EVGCELGQEV---GYTIRFEDCTSPATRIKYMTDGMLQREIVIDPDLKRYSVIM--LDEA 664
Query: 328 GQDVIGEDMKAFAEQLKPLKRT-QLKLIISSATVDAEEICQFYNISASSNATILSVKGHL 386
+ I D+ FA K +R LK+I++SAT+DA++ ++N I ++ G
Sbjct: 665 HERTIATDV-LFALLKKATRRRPDLKIIVTSATLDADKFSAYFN-----ECPIFTIPGRT 718
Query: 387 YPVSVYYSNDPVVNYVQGVVDTAIKIHESMPVGDILAFVIGLEQIEHIIGILKQYHNQRE 446
+PV + YS DP +Y+ + T ++IH P GDIL F+ G E+I+ IL +
Sbjct: 719 FPVEILYSKDPESDYLDAALTTVMQIHIDEPPGDILLFLTGQEEIDTSCEILFERMKALG 778
Query: 447 DL--KLLILPMHGSLPNNEQIKVFRPTPRAMRKIVIATNIAETSITIPGIVYVIDPGFVK 504
+L+ILP++ +LPN Q ++F P P RK+VIATNIAETSITI I YV+DPGFVK
Sbjct: 779 PSVPELIILPVYSALPNEMQSRIFDPAPPGSRKVVIATNIAETSITIDHIYYVVDPGFVK 838
Query: 505 ARWFNPNTLTNSLVVVPISK 524
++P +SLVV PIS+
Sbjct: 839 QNAYDPKLGMDSLVVTPISQ 858
Score = 319 (117.4 bits), Expect = 6.8e-43, Sum P(2) = 6.8e-43
Identities = 64/106 (60%), Positives = 82/106 (77%)
Query: 587 QYLLEAGWCYDTKLIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTK 646
QYL EAG+ + +IG T+PRR++ S+A RVSEE+ LG VGYTIRF+DCT+ T+
Sbjct: 577 QYLAEAGFANEG-VIGCTQPRRVAAMSVAKRVSEEVGCELGQEVGYTIRFEDCTSP-ATR 634
Query: 647 IKYMTEGILMREMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKK 692
IKYMT+G+L RE++ DP L++YSVIMLDE HERTI TD+L LLKK
Sbjct: 635 IKYMTDGMLQREIVIDPDLKRYSVIMLDEAHERTIATDVLFALLKK 680
Score = 226 (84.6 bits), Expect = 2.8e-48, Sum P(2) = 2.8e-48
Identities = 45/147 (30%), Positives = 83/147 (56%)
Query: 700 DFECSDEIASILSLLQVQDIFIKPSSGALSLKARVLRRNFEVEQGDLLTLLNIFKFYEKQ 759
+ CSDE+ SI+++L + ++F +P A+ + F GD LTLLN++ +++
Sbjct: 975 EMRCSDEMLSIVAMLNLPNVFYRPKEKQTQADAK--KAKFHDPNGDHLTLLNVYNAWKQS 1032
Query: 760 ENKKQFCHKYFFNYKVLKRAAELKNQMILLLKKSSIPLVTSPRNTNAVLKCLTNGFFSNA 819
K +C + F ++ L RA +++NQ+ ++++ +++ +TN V + L +GFF NA
Sbjct: 1033 RYSKPWCAENFIQFRALTRARDVRNQIERIMQRFKYQVMSCGSDTNRVRQALCSGFFRNA 1092
Query: 820 AYLHYSGVYRTVRGNEDLYIHPSSVLY 846
A YRT+ +Y+HPSS L+
Sbjct: 1093 ARKDQQEGYRTLIEGTPVYLHPSSALF 1119
Score = 212 (79.7 bits), Expect = 5.8e-38, Sum P(3) = 5.8e-38
Identities = 45/100 (45%), Positives = 68/100 (68%)
Query: 43 KFSRLYTEASF-SQLNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRVA 101
K RLYTEA++ +++ + PE+QR LS+ +L LKA+GI+++L F F PPP + A
Sbjct: 875 KCFRLYTEAAYQTEMLPTSIPEIQRQNLSNTILLLKAMGINDLLHFDFMDPPPINTMLTA 934
Query: 102 LELLYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLLSS 141
LE LY+L A+D G LT+ +G MA+ P+ P +KVL++S
Sbjct: 935 LEELYALSALDDEGLLTR-LGRKMADFPMEPSLSKVLIAS 973
Score = 113 (44.8 bits), Expect = 5.8e-38, Sum P(3) = 5.8e-38
Identities = 23/46 (50%), Positives = 32/46 (69%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILMECSRKFSR 46
MT+G+L DP +++YSVIMLD+ HERTI TD+L +K +R
Sbjct: 638 MTDGMLQREIVIDPDLKRYSVIMLDEAHERTIATDVLFALLKKATR 683
Score = 44 (20.5 bits), Expect = 4.1e-13, Sum P(3) = 4.1e-13
Identities = 11/54 (20%), Positives = 27/54 (50%)
Query: 55 QLNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRVALELLYSL 108
+ +CT P + ++ +LQ + + ++ R+S A +A ++L++L
Sbjct: 624 RFEDCTSPATRIKYMTDGMLQREIVIDPDLKRYSVIMLDEAHERTIATDVLFAL 677
Score = 40 (19.1 bits), Expect = 3.7e-20, Sum P(3) = 3.7e-20
Identities = 15/54 (27%), Positives = 24/54 (44%)
Query: 229 PYQLRYIGQPEMGVGDKARPTIVRSSIDVACSCTVVEFLT-----EMGCRMDFE 277
P ++ Y PE D A T+++ ID ++ FLT + C + FE
Sbjct: 720 PVEILYSKDPESDYLDAALTTVMQIHIDEPPG-DILLFLTGQEEIDTSCEILFE 772
Score = 38 (18.4 bits), Expect = 5.9e-20, Sum P(3) = 5.9e-20
Identities = 8/27 (29%), Positives = 16/27 (59%)
Query: 137 VLLSSGSVLDSAVEILLHRLRGLCDNV 163
+ L+ +D++ EIL R++ L +V
Sbjct: 755 LFLTGQEEIDTSCEILFERMKALGPSV 781
>UNIPROTKB|G4MTU4 [details] [associations]
symbol:MGG_11351 "Pre-mRNA-splicing factor ATP-dependent
RNA helicase prp16" species:242507 "Magnaporthe oryzae 70-15"
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:CM001232 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
KO:K12815 RefSeq:XP_003713740.1 EnsemblFungi:MGG_11351T0
GeneID:5051310 KEGG:mgr:MGG_11351 Uniprot:G4MTU4
Length = 999
Score = 326 (119.8 bits), Expect = 5.2e-48, Sum P(3) = 5.2e-48
Identities = 69/179 (38%), Positives = 107/179 (59%)
Query: 347 KRTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYYSNDPVVNYVQGVV 406
+R LKLI++SAT++A+ F+ A ++ G +PV V +S PV +YV V
Sbjct: 445 RRRDLKLIVTSATMNAKRFSDFFG-----GAPDFTIPGRTFPVDVMFSRSPVEDYVDQAV 499
Query: 407 DTAIKIHESMPVGDILAFVIGLEQIEHIIGILKQYHNQREDL-KLLILPMHGSLPNNEQI 465
+ IH SM GDIL F+ G E IE ++++ + D KL ILP++ +P + Q
Sbjct: 500 QQVLNIHVSMGTGDILVFMTGQEDIEVTCELVRERLDALNDPPKLSILPIYSQMPADLQA 559
Query: 466 KVFRPTPRAMRKIVIATNIAETSITIPGIVYVIDPGFVKARWFNPNTLTNSLVVVPISK 524
K+F P +RK ++ATNIAETS+T+ GI+YV+D G+ K + +NP ++L + PIS+
Sbjct: 560 KIFDRAPPGVRKCIVATNIAETSLTVDGIMYVVDAGYSKLKVYNPKMGMDTLQITPISQ 618
Score = 312 (114.9 bits), Expect = 4.6e-24, P = 4.6e-24
Identities = 62/116 (53%), Positives = 86/116 (74%)
Query: 587 QYLLEAGWCYDTKLIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTK 646
Q+L E G+ +IG T+PRR++ S+A RVSEE+ LG TVGY IRF+DCT++D T
Sbjct: 338 QFLYEDGYG-QLGMIGCTQPRRVAAMSVAKRVSEEMEVKLGGTVGYAIRFEDCTSKD-TV 395
Query: 647 IKYMTEGILMREMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKILKDKERDFE 702
IKYMT+G+L+RE + +P L +YS I++DE HER + TD+LMGL KKIL+ + RD +
Sbjct: 396 IKYMTDGVLLRESLNEPDLDRYSCIIMDEAHERALNTDVLMGLFKKILQ-RRRDLK 450
Score = 208 (78.3 bits), Expect = 5.2e-48, Sum P(3) = 5.2e-48
Identities = 58/237 (24%), Positives = 120/237 (50%)
Query: 618 VSEELRTTLGHTVGYTIRFDDCTTEDVTKIKYMTEGILMREMMTDPLLRKYSVIMLDEVH 677
+ E RT L +T+ + +D+ +M ++ MT L +++ LD +
Sbjct: 654 IPEIQRTNLSNTI---LLIKSLGVKDMLDFDFMDPP--PQDTMTTSLFDLWALGALDNLG 708
Query: 678 ERTI------FTDILMGLLKKILKDKERDFECSDEIASILSLLQVQDIFIKPSSGALSLK 731
+ T F + L K I+ +E + C++E+ +I+S+L V ++F +P
Sbjct: 709 DMTDLGRKMNFFPMDPPLAKLIIMAEE--YGCTEEMITIVSMLSVPNVFYRPKERQEESD 766
Query: 732 ARVLRRNFEVEQGDLLTLLNIFKFYEKQENKKQFCHKYFFNYKVLKRAAELKNQMILLLK 791
A R F V + D LT L+++ ++ + +C ++F + K L+RA E+++Q++ ++K
Sbjct: 767 AA--REKFFVPESDHLTFLHVYSQWKANGHSDAWCSRHFLHSKSLRRAKEVRDQLLDIMK 824
Query: 792 KSSIPLVTSPRNTNAVLKCLTNGFFSNAAYLHYSGVYRTVRGNEDLYIHPSSVLYTL 848
+ +V+ + + V +C+ +G++ AA + G Y +R + + +HP+S LY L
Sbjct: 825 TQKMDIVSCGTDWDVVRRCICSGYYHQAAKVKGIGEYINLRTSVTVQLHPTSALYGL 881
Score = 171 (65.3 bits), Expect = 2.6e-14, Sum P(2) = 2.6e-14
Identities = 39/98 (39%), Positives = 62/98 (63%)
Query: 43 KFSRLYTEASFS-QLNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRVA 101
K RL+TE +F +L T PE+QRT LS+ +L +K+LG+ ++L F F PPP + +
Sbjct: 635 KAFRLFTEKAFKDELYIQTIPEIQRTNLSNTILLIKSLGVKDMLDFDFMDPPPQDTMTTS 694
Query: 102 LELLYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLL 139
L L++LGA+D G++T +G M P+ P AK+++
Sbjct: 695 LFDLWALGALDNLGDMTD-LGRKMNFFPMDPPLAKLII 731
Score = 104 (41.7 bits), Expect = 5.2e-48, Sum P(3) = 5.2e-48
Identities = 17/43 (39%), Positives = 31/43 (72%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILMECSRK 43
MT+G+L+ ++P +++YS I++D+ HER + TD+LM +K
Sbjct: 399 MTDGVLLRESLNEPDLDRYSCIIMDEAHERALNTDVLMGLFKK 441
Score = 43 (20.2 bits), Expect = 5.8e-12, Sum P(2) = 5.8e-12
Identities = 7/19 (36%), Positives = 14/19 (73%)
Query: 434 IIGILKQYHNQREDLKLLI 452
++G+ K+ +R DLKL++
Sbjct: 435 LMGLFKKILQRRRDLKLIV 453
>TAIR|locus:2197965 [details] [associations]
symbol:AT1G26370 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 EMBL:CP002684
GO:GO:0005524 GO:GO:0003676 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
IPI:IPI00532541 RefSeq:NP_173961.3 UniGene:At.15978
ProteinModelPortal:F4IE66 SMR:F4IE66 PRIDE:F4IE66
EnsemblPlants:AT1G26370.1 GeneID:839179 KEGG:ath:AT1G26370
OMA:ADISTNI Uniprot:F4IE66
Length = 717
Score = 356 (130.4 bits), Expect = 5.2e-48, Sum P(3) = 5.2e-48
Identities = 84/199 (42%), Positives = 120/199 (60%)
Query: 329 QDVIGEDMKAFAEQLKPLKRTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYP 388
+D G + + K + LKLII SA++DA +++ A + V+G +P
Sbjct: 207 RDANGPQQNGVLKGYQGRKLSPLKLIIMSASLDARVFSEYFG-----GAKAVHVQGRQFP 261
Query: 389 VSVYYSNDPVVNYVQGVVDTAIKIH-ESMPVGDILAFVIGLEQIEHIIGILKQ-YHNQRE 446
V + Y+ P +YV + T +IH E P GDIL F+ G ++IE + ++++ N E
Sbjct: 262 VDILYTVHPESDYVDATLVTIFQIHFEEKP-GDILVFLTGQDEIESVERLVQERLQNIPE 320
Query: 447 DL-KLLILPMHGSLPNNEQIKVFRPTPRAMRKIVIATNIAETSITIPGIVYVIDPGFVKA 505
D KLL L + +LP+ +Q+KVF P P RK+++ATNIAETSITIPGI YVIDPGFVKA
Sbjct: 321 DKRKLLPLAIFSALPSEQQMKVFAPAPTGFRKVILATNIAETSITIPGIRYVIDPGFVKA 380
Query: 506 RWFNPNTLTNSLVVVPISK 524
R ++P+ SL VVP SK
Sbjct: 381 RSYDPSKGMESLDVVPASK 399
Score = 330 (121.2 bits), Expect = 1.8e-38, Sum P(2) = 1.8e-38
Identities = 62/129 (48%), Positives = 92/129 (71%)
Query: 587 QYLLEAGWCYDTKLIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTK 646
Q+L AG+C + K+IGIT+PRRI+ ++A RV+EE LG VGY+IRFDD TT T+
Sbjct: 76 QFLYNAGFCREGKMIGITQPRRIAAVTVAKRVAEECEVQLGQKVGYSIRFDD-TTSGSTR 134
Query: 647 IKYMTEGILMREMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKILKDKERDFECSDE 706
+KYMT+G+L+RE + DP L +YSVI++DE H+R++ TD+L+ LLKKI + + + E
Sbjct: 135 LKYMTDGLLLREALLDPHLSRYSVIIVDEAHDRSVHTDVLLALLKKIQRTRSQPVSEKTE 194
Query: 707 IASILSLLQ 715
++ S +Q
Sbjct: 195 FGNVASQVQ 203
Score = 204 (76.9 bits), Expect = 1.5e-24, Sum P(2) = 1.5e-24
Identities = 50/130 (38%), Positives = 71/130 (54%)
Query: 12 HDPS--VEKYSVIMLDKVHERTIFTDILMECSRKFSRLYTEASFSQLNECTPPEMQRTEL 69
+DPS +E V+ K E K RLY E F +L + T PE++R L
Sbjct: 383 YDPSKGMESLDVVPASKAQTLQRSGRAGREGPGKSFRLYPEREFEKLEDSTKPEIKRCNL 442
Query: 70 SSAVLQLKALGIHNILRFSFPSPPPAQNLRVALELLYSLGAMDVNGNLTKPVGETMAEMP 129
S+ +LQLKALGI +I+ F F P + AL L+SLGA+ +G L PVG M+ +P
Sbjct: 443 SNIILQLKALGIDDIVGFDFIDKPSRGAIIKALAELHSLGALADDGKLENPVGYQMSRLP 502
Query: 130 LHPIHAKVLL 139
L P+++K L+
Sbjct: 503 LEPVYSKALI 512
Score = 164 (62.8 bits), Expect = 5.2e-48, Sum P(3) = 5.2e-48
Identities = 46/167 (27%), Positives = 85/167 (50%)
Query: 701 FECSDEIASILSLLQVQDIFIKPSSGALSLKARVLRRNFEVEQGDLLTLLNIFK----FY 756
F C +E+ +++L V+ IF P +AR + +F +GD LT L++++ F
Sbjct: 517 FNCLEEMLITVAVLSVESIFYDPREKRE--EARTSKNHFASVEGDHLTYLSVYRESDEFL 574
Query: 757 EKQE--------NK--KQFCHKYFFNYKVLKRAAELKNQMILLLKKSSIPLVTSPRNTNA 806
EK++ +K K++C + + N + LK A ++ Q+ +++ + + + A
Sbjct: 575 EKRKAAGSGNNIDKIMKKWCKENYVNSRSLKHARDIYRQIREHVEQIGFNVSSCGNDMLA 634
Query: 807 VLKCLTNGFFSNAAYLHYSGVYRTVRGNEDLYIHPSSVLYTLQQPQC 853
+CL FF AA G YR + E ++IHP+SVL+ + P+C
Sbjct: 635 FRRCLAASFFLKAAQRQLDGTYRALESGEVVHIHPTSVLFRAK-PEC 680
Score = 106 (42.4 bits), Expect = 5.2e-48, Sum P(3) = 5.2e-48
Identities = 18/46 (39%), Positives = 32/46 (69%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILMECSRKFSR 46
MT+G+L+ DP + +YSVI++D+ H+R++ TD+L+ +K R
Sbjct: 138 MTDGLLLREALLDPHLSRYSVIIVDEAHDRSVHTDVLLALLKKIQR 183
Score = 38 (18.4 bits), Expect = 6.8e-35, Sum P(3) = 6.8e-35
Identities = 11/31 (35%), Positives = 15/31 (48%)
Query: 828 YRTVRGNEDLYIHPSSVLYTLQQPQCTHLEG 858
Y +G E L + P+S TLQ+ EG
Sbjct: 383 YDPSKGMESLDVVPASKAQTLQRSGRAGREG 413
Score = 38 (18.4 bits), Expect = 2.0e-11, Sum P(2) = 2.0e-11
Identities = 9/38 (23%), Positives = 19/38 (50%)
Query: 385 HLYPVSVYYSNDPVVNYVQGVVDTAIKIHESMPVGDIL 422
H++P SV + P ++ T+ K +++ + D L
Sbjct: 666 HIHPTSVLFRAKPECVIFNELMQTSKKYIKNLTIIDSL 703
>CGD|CAL0004768 [details] [associations]
symbol:PRP22 species:5476 "Candida albicans" [GO:0071007
"U2-type catalytic step 2 spliceosome" evidence=IEA] [GO:0071021
"U2-type post-spliceosomal complex" evidence=IEA] [GO:0000350
"generation of catalytic spliceosome for second transesterification
step" evidence=IEA] [GO:0000390 "spliceosomal complex disassembly"
evidence=IEA] [GO:0000386 "second spliceosomal transesterification
activity" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
CGD:CAL0004768 GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AACQ01000012 InterPro:IPR022967 SMART:SM00316
KO:K12818 EMBL:AACQ01000011 RefSeq:XP_721941.1 RefSeq:XP_722102.1
ProteinModelPortal:Q5AJY8 STRING:Q5AJY8 GeneID:3636272
GeneID:3636404 KEGG:cal:CaO19.11516 KEGG:cal:CaO19.4033
Uniprot:Q5AJY8
Length = 996
Score = 365 (133.5 bits), Expect = 6.5e-48, Sum P(3) = 6.5e-48
Identities = 99/298 (33%), Positives = 159/298 (53%)
Query: 232 LRYIGQPEMG-VGDKARPTIVRSSIDVACSCTVVEFLTEMGCRMDFEYISRGYMFRKGRM 290
++YI + M VG + + VA E+GC++ + + GY R +
Sbjct: 370 VQYIYEEGMNKVGGQTKLIGCTQPRRVAAESVAKRVSEEVGCKLG-DTV--GYTIRFEDV 426
Query: 291 KILVSKIFKMSQGKPSDSGV-EPISQSYLVELSILAPGGQDVIGEDMKAFAEQLKPLKRT 349
+ I M+ G + +P Y V + L + I D+ FA K+
Sbjct: 427 TSENTVIKYMTDGMLEREALNDPNMNRYSVIM--LDEAHERTIATDV-LFALLKNAAKQN 483
Query: 350 -QLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYYSNDPVVNYVQGVVDT 408
LK+I++SAT+D+ + +++N N I+++ G +PV V Y+ P ++Y+ +++
Sbjct: 484 PNLKVIVTSATLDSNKFSRYFN-----NCPIITIPGRTFPVEVLYTKAPEMDYLAAALES 538
Query: 409 AIKIHESMPVGDILAFVIGLEQIEHIIGILKQYHNQR-EDL-KLLILPMHGSLPNNEQIK 466
I+IH S P GDIL F+ G E+IE L + E++ +L+ILP++ +LP+ Q +
Sbjct: 539 VIQIHVSEPAGDILVFLTGQEEIETSCEALHERMKLLGENIPELIILPVYSALPSEMQTR 598
Query: 467 VFRPTPRAMRKIVIATNIAETSITIPGIVYVIDPGFVKARWFNPNTLTNSLVVVPISK 524
+F PTP RK+++ATNIAETSITI GI YV+DPGFVK ++ +SL V PISK
Sbjct: 599 IFEPTPPGSRKVILATNIAETSITIDGIYYVVDPGFVKINMYDSKLGMDSLRVTPISK 656
Score = 307 (113.1 bits), Expect = 3.4e-23, Sum P(2) = 3.4e-23
Identities = 65/112 (58%), Positives = 80/112 (71%)
Query: 587 QYLLEAGWCY---DTKLIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTED 643
QY+ E G TKLIG T+PRR++ S+A RVSEE+ LG TVGYTIRF+D T+E+
Sbjct: 371 QYIYEEGMNKVGGQTKLIGCTQPRRVAAESVAKRVSEEVGCKLGDTVGYTIRFEDVTSEN 430
Query: 644 VTKIKYMTEGILMREMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKILK 695
T IKYMT+G+L RE + DP + +YSVIMLDE HERTI TD+L LLK K
Sbjct: 431 -TVIKYMTDGMLEREALNDPNMNRYSVIMLDEAHERTIATDVLFALLKNAAK 481
Score = 221 (82.9 bits), Expect = 6.5e-48, Sum P(3) = 6.5e-48
Identities = 67/245 (27%), Positives = 118/245 (48%)
Query: 614 LANRVSEELRTTLGHTVGYTIRFDDCTTEDVTKIKYMTEGILMREMMTDPLLRKYSVIML 673
+ N + E R L HT+ + D+ ++M + M+T L Y + L
Sbjct: 688 IPNTIPEIQRQNLSHTI---LMLKAMGIHDLVNFEFM-DPPSTTTMLT-ALEDLYILDAL 742
Query: 674 DEVHERTIF----TDILM--GLLKKILKDKERDFECSDEIASILSLLQVQDIFIKPSSGA 727
D+ T D+ M L K +++ E +EC++EI SI+++L VQ IF +P
Sbjct: 743 DDDGNLTTLGRKMADLPMEPALAKTLIQSVE--YECTEEILSIVAMLSVQTIFYRPKDKQ 800
Query: 728 LSLKARVLRRNFEVEQGDLLTLLNIFKFYEKQENKKQFCHKYFFNYKVLKRAAELKNQMI 787
R R F GD LTLLN+F+ + + K +C F + ++RA E++ Q+
Sbjct: 801 ALADQRKSR--FHHSLGDHLTLLNVFQSWCRNNYSKTWCRDNFIQERSMRRAMEVRKQLK 858
Query: 788 LLLKKSSIPLVTSPRNTNAVLKCLTNGFFSNAAYLHYSGVYRTVRGNEDLYIHPSSVLYT 847
++++ ++ + + V + +G+F N+A Y+T+ N +Y+HPSS LY
Sbjct: 859 SIMQRFGYKTMSCGNDVDRVRRTFCSGYFKNSAKRQEGEGYKTLNENTLVYLHPSSSLYG 918
Query: 848 LQQPQ 852
++PQ
Sbjct: 919 -KKPQ 922
Score = 207 (77.9 bits), Expect = 8.1e-19, Sum P(2) = 8.1e-19
Identities = 45/100 (45%), Positives = 63/100 (63%)
Query: 43 KFSRLYTEASFS-QLNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRVA 101
K RLYTE ++ ++ T PE+QR LS +L LKA+GIH+++ F F PP + A
Sbjct: 673 KCYRLYTEQAYEKEMIPNTIPEIQRQNLSHTILMLKAMGIHDLVNFEFMDPPSTTTMLTA 732
Query: 102 LELLYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLLSS 141
LE LY L A+D +GNLT +G MA++P+ P AK L+ S
Sbjct: 733 LEDLYILDALDDDGNLTT-LGRKMADLPMEPALAKTLIQS 771
Score = 110 (43.8 bits), Expect = 2.5e-20, Sum P(2) = 2.5e-20
Identities = 21/37 (56%), Positives = 29/37 (78%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDIL 37
MT+G+L +DP++ +YSVIMLD+ HERTI TD+L
Sbjct: 436 MTDGMLEREALNDPNMNRYSVIMLDEAHERTIATDVL 472
Score = 48 (22.0 bits), Expect = 6.5e-48, Sum P(3) = 6.5e-48
Identities = 11/33 (33%), Positives = 17/33 (51%)
Query: 43 KFSRLYTEASFSQLNECTPPEMQRTELSSAVLQ 75
KF+R + E F Q + E ++ELS + Q
Sbjct: 259 KFARDFKEEKFKQKKQREKEEKMQSELSDPLFQ 291
Score = 43 (20.2 bits), Expect = 2.3e-13, Sum P(2) = 2.3e-13
Identities = 14/51 (27%), Positives = 26/51 (50%)
Query: 69 LSSAVLQLKALGIHNILRFSFPSPPPAQNLRVALELLYSL--GAMDVNGNL 117
++ +L+ +AL N+ R+S A +A ++L++L A N NL
Sbjct: 436 MTDGMLEREALNDPNMNRYSVIMLDEAHERTIATDVLFALLKNAAKQNPNL 486
Score = 37 (18.1 bits), Expect = 9.2e-47, Sum P(3) = 9.2e-47
Identities = 8/19 (42%), Positives = 12/19 (63%)
Query: 57 NECTPPEMQRTELSSAVLQ 75
NE +PP Q ++ S V+Q
Sbjct: 66 NEISPPPPQVGKIYSGVVQ 84
>ZFIN|ZDB-GENE-030131-650 [details] [associations]
symbol:dhx15 "DEAH (Asp-Glu-Ala-His) box
polypeptide 15" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 ZFIN:ZDB-GENE-030131-650 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K12820 GeneTree:ENSGT00650000093246
OMA:TVLQIHA CTD:1665 EMBL:CU651678 IPI:IPI00481686
RefSeq:NP_001108613.1 UniGene:Dr.4024 Ensembl:ENSDART00000081245
GeneID:321931 KEGG:dre:321931 NextBio:20807587 Uniprot:E7F3I8
Length = 769
Score = 308 (113.5 bits), Expect = 9.9e-48, Sum P(4) = 9.9e-48
Identities = 67/187 (35%), Positives = 114/187 (60%)
Query: 347 KRTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYYSNDPVVNYVQGVV 406
+R+ LK+I+ SAT+DA + +++ N +L++ G +PV ++Y+ +P +Y++ +
Sbjct: 256 QRSDLKVIVMSATLDAGKFQVYFD-----NCPLLTIPGRTHPVEIFYTPEPERDYLEAAI 310
Query: 407 DTAIKIHE-SMPVGDILAFVIGLEQIEHIIGILK-QYHNQREDL-KLLILPMHGSLPNNE 463
T I+IH GD+L F+ G E+I+ +K + + D+ + I+P++ +LP +
Sbjct: 311 RTVIQIHMCEEDEGDVLLFLTGQEEIDEACKRIKREIDDLGPDVGDIKIIPLYSTLPPQQ 370
Query: 464 QIKVFRPTPRAM------RKIVIATNIAETSITIPGIVYVIDPGFVKARWFNPNTLTNSL 517
Q ++F P P RK+V++TNIAETS+TI G+V+VIDPGF K + +NP SL
Sbjct: 371 QQRIFEPPPPRKPNGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESL 430
Query: 518 VVVPISK 524
+V ISK
Sbjct: 431 LVTAISK 437
Score = 285 (105.4 bits), Expect = 1.8e-38, Sum P(2) = 1.8e-38
Identities = 51/97 (52%), Positives = 76/97 (78%)
Query: 601 IGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTKIKYMTEGILMREMM 660
+ T+PRR++ S+A RV++E+ LG VGY+IRF+DC++ T +KYMT+G+L+RE M
Sbjct: 162 VACTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAK-TILKYMTDGMLLREAM 220
Query: 661 TDPLLRKYSVIMLDEVHERTIFTDILMGLLKKILKDK 697
DPLL +Y VI+LDE HERT+ TDILMG+LK++++ +
Sbjct: 221 NDPLLERYGVIILDEAHERTLATDILMGVLKEVVRQR 257
Score = 213 (80.0 bits), Expect = 9.9e-48, Sum P(4) = 9.9e-48
Identities = 47/150 (31%), Positives = 81/150 (54%)
Query: 700 DFECSDEIASILSLLQVQDIFIKPSSGALSLKARVLRRNFEVEQGDLLTLLNIFKFYEKQ 759
DF CS+E+ SI ++L V F++P+ + +R F GD LTLLN++ +++
Sbjct: 554 DFNCSNEVLSITAMLSVPQCFVRPTEAKKAADESKMR--FAHIDGDHLTLLNVYHAFKQN 611
Query: 760 ENKKQFCHKYFFNYKVLKRAAELKNQMILLLKKSSIPL----VTSPRNTNAVLKCLTNGF 815
Q+C+ F NY+ L A ++ Q+ ++ + ++P TS + + L GF
Sbjct: 612 HESVQWCYDNFINYRSLMSADNVRQQLSRIMDRFNLPRRSTEFTSRDYYINIRRALVTGF 671
Query: 816 FSNAAYLHYSGVYRTVRGNEDLYIHPSSVL 845
F A+L +G Y TV+ N+ + +HPS+VL
Sbjct: 672 FMQVAHLERTGHYLTVKDNQVVQLHPSTVL 701
Score = 197 (74.4 bits), Expect = 6.5e-36, Sum P(3) = 6.5e-36
Identities = 45/100 (45%), Positives = 67/100 (67%)
Query: 43 KFSRLYTEASF-SQLNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRVA 101
K RLYTE ++ +++ + T PE+ R+ L S VLQLK LGI +++ F F PP + L A
Sbjct: 454 KCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMRA 513
Query: 102 LELLYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLLSS 141
LELL L A++ +G+LT+ +G MAE PL P AK++++S
Sbjct: 514 LELLNYLAALNDDGDLTE-LGSMMAEFPLDPQLAKMVIAS 552
Score = 114 (45.2 bits), Expect = 9.9e-48, Sum P(4) = 9.9e-48
Identities = 21/38 (55%), Positives = 30/38 (78%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILM 38
MT+G+L+ +DP +E+Y VI+LD+ HERT+ TDILM
Sbjct: 210 MTDGMLLREAMNDPLLERYGVIILDEAHERTLATDILM 247
Score = 52 (23.4 bits), Expect = 1.8e-20, Sum P(4) = 1.8e-20
Identities = 8/20 (40%), Positives = 16/20 (80%)
Query: 434 IIGILKQYHNQREDLKLLIL 453
++G+LK+ QR DLK++++
Sbjct: 246 LMGVLKEVVRQRSDLKVIVM 265
Score = 38 (18.4 bits), Expect = 5.2e-30, Sum P(3) = 5.2e-30
Identities = 7/17 (41%), Positives = 9/17 (52%)
Query: 581 VFFSFFQYLLEAGWCYD 597
V+ +F Q WCYD
Sbjct: 604 VYHAFKQNHESVQWCYD 620
Score = 37 (18.1 bits), Expect = 9.9e-48, Sum P(4) = 9.9e-48
Identities = 10/26 (38%), Positives = 13/26 (50%)
Query: 650 MTE-GILMREMMTDPLLRKYSVIMLD 674
+TE G +M E DP L K + D
Sbjct: 529 LTELGSMMAEFPLDPQLAKMVIASCD 554
>POMBASE|SPBC1711.17 [details] [associations]
symbol:prp16 "ATP-dependent RNA helicase Prp16
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000350
"generation of catalytic spliceosome for second transesterification
step" evidence=ISO] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=IC]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005681 "spliceosomal
complex" evidence=ISO] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 PomBase:SPBC1711.17 GO:GO:0005524 EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0005681 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 HOGENOM:HOG000175261
KO:K12815 GO:GO:0000350 OMA:PSRSTWE PIR:T39724 RefSeq:NP_595890.2
ProteinModelPortal:Q9P774 IntAct:Q9P774 EnsemblFungi:SPBC1711.17.1
GeneID:2540006 KEGG:spo:SPBC1711.17 OrthoDB:EOG4GQTD2
NextBio:20801149 Uniprot:Q9P774
Length = 1173
Score = 319 (117.4 bits), Expect = 3.4e-47, Sum P(3) = 3.4e-47
Identities = 66/179 (36%), Positives = 106/179 (59%)
Query: 347 KRTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYYSNDPVVNYVQGVV 406
+R +KL+++SAT+++++ F+ A ++ G YPV + ++ P +YV+ V
Sbjct: 634 RRRDIKLLVTSATMNSQKFSDFFG-----GAPQFTIPGRTYPVDIMFAKAPCSDYVEAAV 688
Query: 407 DTAIKIHESMPVGDILAFVIGLEQIEHIIGILKQYHNQREDL-KLLILPMHGSLPNNEQI 465
++IH S P GDIL F+ G E IE I+ NQ D +L ILP++ +P + Q
Sbjct: 689 RQVLQIHLSQPAGDILVFMTGQEDIEATCEIIADRLNQLHDAPRLSILPIYSQMPADLQA 748
Query: 466 KVFRPTPRAMRKIVIATNIAETSITIPGIVYVIDPGFVKARWFNPNTLTNSLVVVPISK 524
K+F +RK+V+ATNIAETS+T+ GI YV+D G+ K + +N ++L V PIS+
Sbjct: 749 KIFDSAEPGVRKVVVATNIAETSLTVHGISYVVDTGYCKLKMYNSKLGIDTLQVTPISQ 807
Score = 304 (112.1 bits), Expect = 1.0e-39, Sum P(2) = 1.0e-39
Identities = 63/116 (54%), Positives = 85/116 (73%)
Query: 587 QYLLEAGWCYDTKLIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTK 646
Q+L E G+ + +IG T+PRR++ S+A RVSEE+ LG TVGY+IRF+D T D T
Sbjct: 527 QFLYEDGY-HRNGMIGCTQPRRVAAMSVAKRVSEEMGVRLGSTVGYSIRFEDVTGPD-TV 584
Query: 647 IKYMTEGILMREMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKILKDKERDFE 702
IKYMT+G+L+RE + L KYSVI++DE HER++ TDILMGLLKK+L + RD +
Sbjct: 585 IKYMTDGVLLRESLMQNNLEKYSVIIMDEAHERSLNTDILMGLLKKVLS-RRRDIK 639
Score = 211 (79.3 bits), Expect = 3.4e-47, Sum P(3) = 3.4e-47
Identities = 50/159 (31%), Positives = 86/159 (54%)
Query: 690 LKKILKDKERDFECSDEIASILSLLQVQDIFIKPSSGALSLKARVLRRNFEVEQGDLLTL 749
L K++ E D++C++EI +I+S+L V +F +P A A R F V + D L L
Sbjct: 915 LSKLIIIAE-DYKCTEEIITIVSMLSVPSVFYRPKERAEESDAA--REKFNVPESDHLML 971
Query: 750 LNIFKFYEKQENKKQFCHKYFFNYKVLKRAAELKNQMILLLKKSSIPLVTSPRNTNAVLK 809
LNI++ +++ +C K+F + K LKRA +++ Q++ ++ K I L S + + V +
Sbjct: 972 LNIYQHWQRNGYSNSWCSKHFLHSKTLKRARDIRQQLVEIMSKQKISL-ESVSDWDIVRR 1030
Query: 810 CLTNGFFSNAAYLHYSGVYRTVRGNEDLYIHPSSVLYTL 848
L + +F AA G Y +R ++H +S LY L
Sbjct: 1031 VLCSAYFHQAACAKGIGEYVHLRSGMPCHLHVTSSLYGL 1069
Score = 173 (66.0 bits), Expect = 2.2e-31, Sum P(3) = 2.2e-31
Identities = 40/95 (42%), Positives = 60/95 (63%)
Query: 46 RLYTEASF-SQLNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRVALEL 104
RLYTE ++ ++ E T PE+QRT LS+ VL LK+LG+ I F F PP L +L
Sbjct: 827 RLYTEMAYIREMFETTLPEIQRTNLSNTVLILKSLGVEEISDFDFMDRPPNDTLMASLYE 886
Query: 105 LYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLL 139
L++LGA+D G LT +G+ M+ P+ P +K+++
Sbjct: 887 LWTLGALDNFGKLTT-LGKKMSLFPMDPSLSKLII 920
Score = 104 (41.7 bits), Expect = 3.4e-47, Sum P(3) = 3.4e-47
Identities = 20/43 (46%), Positives = 31/43 (72%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILMECSRK 43
MT+G+L+ ++EKYSVI++D+ HER++ TDILM +K
Sbjct: 588 MTDGVLLRESLMQNNLEKYSVIIMDEAHERSLNTDILMGLLKK 630
Score = 48 (22.0 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 8/19 (42%), Positives = 16/19 (84%)
Query: 434 IIGILKQYHNQREDLKLLI 452
++G+LK+ ++R D+KLL+
Sbjct: 624 LMGLLKKVLSRRRDIKLLV 642
>UNIPROTKB|F1NHI3 [details] [associations]
symbol:DHX15 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005689 "U12-type spliceosomal complex"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00650000093246 OMA:TVLQIHA
GO:GO:0005689 EMBL:AADN02015408 EMBL:AADN02015409 EMBL:AADN02015410
IPI:IPI00577528 Ensembl:ENSGALT00000023259 Uniprot:F1NHI3
Length = 762
Score = 305 (112.4 bits), Expect = 4.2e-47, Sum P(4) = 4.2e-47
Identities = 70/190 (36%), Positives = 112/190 (58%)
Query: 347 KRTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYYSNDPVVNYVQGVV 406
+R LK+I+ SAT+DA + Q Y N +L++ G +PV ++Y+ +P +Y++ +
Sbjct: 249 QRADLKVIVMSATLDAGKF-QIY----FDNCPLLTIPGRTHPVEIFYTPEPERDYLEAAI 303
Query: 407 DTAIKIHE-SMPVGDILAFVIGLEQIEHIIGILKQYHNQREDL-----KLLILPMHGSLP 460
T I+IH GD+L F+ G E+I+ K+ + +DL + I+P++ +LP
Sbjct: 304 RTVIQIHMCEEEEGDLLLFLTGQEEIDEAC---KRIKREIDDLGPEVGDIKIIPLYSTLP 360
Query: 461 NNEQIKVFRPTPRAM------RKIVIATNIAETSITIPGIVYVIDPGFVKARWFNPNTLT 514
+Q ++F P P RK+V++TNIAETS+TI G+V+VIDPGF K + +NP
Sbjct: 361 PQQQQRIFEPPPPKKQNGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRV 420
Query: 515 NSLVVVPISK 524
SL+V ISK
Sbjct: 421 ESLLVTAISK 430
Score = 285 (105.4 bits), Expect = 3.5e-38, Sum P(2) = 3.5e-38
Identities = 51/97 (52%), Positives = 76/97 (78%)
Query: 601 IGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTKIKYMTEGILMREMM 660
+ T+PRR++ S+A RV++E+ LG VGY+IRF+DC++ T +KYMT+G+L+RE M
Sbjct: 155 VACTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAK-TILKYMTDGMLLREAM 213
Query: 661 TDPLLRKYSVIMLDEVHERTIFTDILMGLLKKILKDK 697
DPLL +Y VI+LDE HERT+ TDILMG+LK++++ +
Sbjct: 214 NDPLLERYGVIILDEAHERTLATDILMGVLKEVVRQR 250
Score = 210 (79.0 bits), Expect = 4.2e-47, Sum P(4) = 4.2e-47
Identities = 46/150 (30%), Positives = 81/150 (54%)
Query: 700 DFECSDEIASILSLLQVQDIFIKPSSGALSLKARVLRRNFEVEQGDLLTLLNIFKFYEKQ 759
D+ CS+E+ SI ++L V F++P+ + +R F GD LTLLN++ +++
Sbjct: 547 DYNCSNEVLSITAMLSVPQCFVRPTEAKKAADEAKMR--FAHIDGDHLTLLNVYHAFKQN 604
Query: 760 ENKKQFCHKYFFNYKVLKRAAELKNQMILLLKKSSIPL----VTSPRNTNAVLKCLTNGF 815
Q+C+ F NY+ L A ++ Q+ ++ + ++P TS + K L G+
Sbjct: 605 HESVQWCYDNFINYRSLMSADNVRQQLSRIMDRFNLPRRSTDFTSRDYYINIRKALVTGY 664
Query: 816 FSNAAYLHYSGVYRTVRGNEDLYIHPSSVL 845
F A+L +G Y TV+ N+ + +HPS+VL
Sbjct: 665 FMQVAHLERTGHYLTVKDNQVVQLHPSTVL 694
Score = 197 (74.4 bits), Expect = 1.3e-35, Sum P(3) = 1.3e-35
Identities = 45/100 (45%), Positives = 67/100 (67%)
Query: 43 KFSRLYTEASF-SQLNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRVA 101
K RLYTE ++ +++ + T PE+ R+ L S VLQLK LGI +++ F F PP + L A
Sbjct: 447 KCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMRA 506
Query: 102 LELLYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLLSS 141
LELL L A++ +G+LT+ +G MAE PL P AK++++S
Sbjct: 507 LELLNYLAALNDDGDLTE-LGSMMAEFPLDPQLAKMVIAS 545
Score = 114 (45.2 bits), Expect = 4.2e-47, Sum P(4) = 4.2e-47
Identities = 21/38 (55%), Positives = 30/38 (78%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILM 38
MT+G+L+ +DP +E+Y VI+LD+ HERT+ TDILM
Sbjct: 203 MTDGMLLREAMNDPLLERYGVIILDEAHERTLATDILM 240
Score = 51 (23.0 bits), Expect = 4.7e-20, Sum P(4) = 4.7e-20
Identities = 8/20 (40%), Positives = 16/20 (80%)
Query: 434 IIGILKQYHNQREDLKLLIL 453
++G+LK+ QR DLK++++
Sbjct: 239 LMGVLKEVVRQRADLKVIVM 258
Score = 38 (18.4 bits), Expect = 1.1e-29, Sum P(3) = 1.1e-29
Identities = 7/17 (41%), Positives = 9/17 (52%)
Query: 581 VFFSFFQYLLEAGWCYD 597
V+ +F Q WCYD
Sbjct: 597 VYHAFKQNHESVQWCYD 613
Score = 37 (18.1 bits), Expect = 4.2e-47, Sum P(4) = 4.2e-47
Identities = 10/26 (38%), Positives = 13/26 (50%)
Query: 650 MTE-GILMREMMTDPLLRKYSVIMLD 674
+TE G +M E DP L K + D
Sbjct: 522 LTELGSMMAEFPLDPQLAKMVIASCD 547
>UNIPROTKB|A5D7D9 [details] [associations]
symbol:DHX15 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005689 "U12-type spliceosomal complex" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 KO:K12820
GeneTree:ENSGT00650000093246 OMA:TVLQIHA CTD:1665
HOVERGEN:HBG039428 OrthoDB:EOG4K6G3N GO:GO:0005689
EMBL:DAAA02017121 EMBL:BC140520 IPI:IPI00709068
RefSeq:NP_001091487.1 UniGene:Bt.58909 Ensembl:ENSBTAT00000011714
GeneID:512327 KEGG:bta:512327 InParanoid:A5D7D9 NextBio:20870343
Uniprot:A5D7D9
Length = 795
Score = 306 (112.8 bits), Expect = 4.6e-47, Sum P(4) = 4.6e-47
Identities = 70/190 (36%), Positives = 113/190 (59%)
Query: 347 KRTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYYSNDPVVNYVQGVV 406
+R+ LK+I+ SAT+DA + Q Y N +L++ G +PV ++Y+ +P +Y++ +
Sbjct: 282 QRSDLKVIVMSATLDAGKF-QIY----FDNCPLLTIPGRTHPVEIFYTPEPERDYLEAAI 336
Query: 407 DTAIKIHE-SMPVGDILAFVIGLEQIEHIIGILKQYHNQREDL-----KLLILPMHGSLP 460
T I+IH GD+L F+ G E+I+ K+ + +DL + I+P++ +LP
Sbjct: 337 RTVIQIHMCEEEEGDLLLFLTGQEEIDEAC---KRIKREVDDLGPEVGDIKIIPLYSTLP 393
Query: 461 NNEQIKVFRPTPRAM------RKIVIATNIAETSITIPGIVYVIDPGFVKARWFNPNTLT 514
+Q ++F P P RK+V++TNIAETS+TI G+V+VIDPGF K + +NP
Sbjct: 394 PQQQQRIFEPPPPKKQNGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRV 453
Query: 515 NSLVVVPISK 524
SL+V ISK
Sbjct: 454 ESLLVTAISK 463
Score = 285 (105.4 bits), Expect = 4.2e-38, Sum P(2) = 4.2e-38
Identities = 51/97 (52%), Positives = 76/97 (78%)
Query: 601 IGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTKIKYMTEGILMREMM 660
+ T+PRR++ S+A RV++E+ LG VGY+IRF+DC++ T +KYMT+G+L+RE M
Sbjct: 188 VACTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAK-TILKYMTDGMLLREAM 246
Query: 661 TDPLLRKYSVIMLDEVHERTIFTDILMGLLKKILKDK 697
DPLL +Y VI+LDE HERT+ TDILMG+LK++++ +
Sbjct: 247 NDPLLERYGVIILDEAHERTLATDILMGVLKEVVRQR 283
Score = 210 (79.0 bits), Expect = 4.6e-47, Sum P(4) = 4.6e-47
Identities = 46/150 (30%), Positives = 81/150 (54%)
Query: 700 DFECSDEIASILSLLQVQDIFIKPSSGALSLKARVLRRNFEVEQGDLLTLLNIFKFYEKQ 759
D+ CS+E+ SI ++L V F++P+ + +R F GD LTLLN++ +++
Sbjct: 580 DYNCSNEVLSITAMLSVPQCFVRPTEAKKAADEAKMR--FAHIDGDHLTLLNVYHAFKQN 637
Query: 760 ENKKQFCHKYFFNYKVLKRAAELKNQMILLLKKSSIPL----VTSPRNTNAVLKCLTNGF 815
Q+C+ F NY+ L A ++ Q+ ++ + ++P TS + K L G+
Sbjct: 638 HESVQWCYDNFINYRSLMSADNVRQQLSRIMDRFNLPRRSTDFTSRDYYINIRKALVTGY 697
Query: 816 FSNAAYLHYSGVYRTVRGNEDLYIHPSSVL 845
F A+L +G Y TV+ N+ + +HPS+VL
Sbjct: 698 FMQVAHLERTGHYLTVKDNQVVQLHPSTVL 727
Score = 197 (74.4 bits), Expect = 1.6e-35, Sum P(3) = 1.6e-35
Identities = 45/100 (45%), Positives = 67/100 (67%)
Query: 43 KFSRLYTEASF-SQLNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRVA 101
K RLYTE ++ +++ + T PE+ R+ L S VLQLK LGI +++ F F PP + L A
Sbjct: 480 KCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMRA 539
Query: 102 LELLYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLLSS 141
LELL L A++ +G+LT+ +G MAE PL P AK++++S
Sbjct: 540 LELLNYLAALNDDGDLTE-LGSMMAEFPLDPQLAKMVIAS 578
Score = 114 (45.2 bits), Expect = 4.6e-47, Sum P(4) = 4.6e-47
Identities = 21/38 (55%), Positives = 30/38 (78%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILM 38
MT+G+L+ +DP +E+Y VI+LD+ HERT+ TDILM
Sbjct: 236 MTDGMLLREAMNDPLLERYGVIILDEAHERTLATDILM 273
Score = 52 (23.4 bits), Expect = 4.8e-20, Sum P(4) = 4.8e-20
Identities = 8/20 (40%), Positives = 16/20 (80%)
Query: 434 IIGILKQYHNQREDLKLLIL 453
++G+LK+ QR DLK++++
Sbjct: 272 LMGVLKEVVRQRSDLKVIVM 291
Score = 38 (18.4 bits), Expect = 1.1e-29, Sum P(3) = 1.1e-29
Identities = 7/17 (41%), Positives = 9/17 (52%)
Query: 581 VFFSFFQYLLEAGWCYD 597
V+ +F Q WCYD
Sbjct: 630 VYHAFKQNHESVQWCYD 646
Score = 37 (18.1 bits), Expect = 4.6e-47, Sum P(4) = 4.6e-47
Identities = 10/26 (38%), Positives = 13/26 (50%)
Query: 650 MTE-GILMREMMTDPLLRKYSVIMLD 674
+TE G +M E DP L K + D
Sbjct: 555 LTELGSMMAEFPLDPQLAKMVIASCD 580
>UNIPROTKB|E2R2U3 [details] [associations]
symbol:DHX15 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005689 "U12-type spliceosomal complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 KO:K12820 GeneTree:ENSGT00650000093246 OMA:TVLQIHA
CTD:1665 GO:GO:0005689 EMBL:AAEX03002593 EMBL:AAEX03002594
RefSeq:XP_851535.1 Ensembl:ENSCAFT00000026155 GeneID:488856
KEGG:cfa:488856 NextBio:20862139 Uniprot:E2R2U3
Length = 795
Score = 306 (112.8 bits), Expect = 4.6e-47, Sum P(4) = 4.6e-47
Identities = 70/190 (36%), Positives = 113/190 (59%)
Query: 347 KRTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYYSNDPVVNYVQGVV 406
+R+ LK+I+ SAT+DA + Q Y N +L++ G +PV ++Y+ +P +Y++ +
Sbjct: 282 QRSDLKVIVMSATLDAGKF-QIY----FDNCPLLTIPGRTHPVEIFYTPEPERDYLEAAI 336
Query: 407 DTAIKIHE-SMPVGDILAFVIGLEQIEHIIGILKQYHNQREDL-----KLLILPMHGSLP 460
T I+IH GD+L F+ G E+I+ K+ + +DL + I+P++ +LP
Sbjct: 337 RTVIQIHMCEEEEGDLLLFLTGQEEIDEAC---KRIKREVDDLGPEVGDIKIIPLYSTLP 393
Query: 461 NNEQIKVFRPTPRAM------RKIVIATNIAETSITIPGIVYVIDPGFVKARWFNPNTLT 514
+Q ++F P P RK+V++TNIAETS+TI G+V+VIDPGF K + +NP
Sbjct: 394 PQQQQRIFEPPPPKKQNGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRV 453
Query: 515 NSLVVVPISK 524
SL+V ISK
Sbjct: 454 ESLLVTAISK 463
Score = 285 (105.4 bits), Expect = 4.2e-38, Sum P(2) = 4.2e-38
Identities = 51/97 (52%), Positives = 76/97 (78%)
Query: 601 IGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTKIKYMTEGILMREMM 660
+ T+PRR++ S+A RV++E+ LG VGY+IRF+DC++ T +KYMT+G+L+RE M
Sbjct: 188 VACTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAK-TILKYMTDGMLLREAM 246
Query: 661 TDPLLRKYSVIMLDEVHERTIFTDILMGLLKKILKDK 697
DPLL +Y VI+LDE HERT+ TDILMG+LK++++ +
Sbjct: 247 NDPLLERYGVIILDEAHERTLATDILMGVLKEVVRQR 283
Score = 210 (79.0 bits), Expect = 4.6e-47, Sum P(4) = 4.6e-47
Identities = 46/150 (30%), Positives = 81/150 (54%)
Query: 700 DFECSDEIASILSLLQVQDIFIKPSSGALSLKARVLRRNFEVEQGDLLTLLNIFKFYEKQ 759
D+ CS+E+ SI ++L V F++P+ + +R F GD LTLLN++ +++
Sbjct: 580 DYNCSNEVLSITAMLSVPQCFVRPTEAKKAADEAKMR--FAHIDGDHLTLLNVYHAFKQN 637
Query: 760 ENKKQFCHKYFFNYKVLKRAAELKNQMILLLKKSSIPL----VTSPRNTNAVLKCLTNGF 815
Q+C+ F NY+ L A ++ Q+ ++ + ++P TS + K L G+
Sbjct: 638 HESVQWCYDNFINYRSLMSADNVRQQLSRIMDRFNLPRRSTDFTSRDYYINIRKALVTGY 697
Query: 816 FSNAAYLHYSGVYRTVRGNEDLYIHPSSVL 845
F A+L +G Y TV+ N+ + +HPS+VL
Sbjct: 698 FMQVAHLERTGHYLTVKDNQVVQLHPSTVL 727
Score = 197 (74.4 bits), Expect = 1.6e-35, Sum P(3) = 1.6e-35
Identities = 45/100 (45%), Positives = 67/100 (67%)
Query: 43 KFSRLYTEASF-SQLNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRVA 101
K RLYTE ++ +++ + T PE+ R+ L S VLQLK LGI +++ F F PP + L A
Sbjct: 480 KCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMRA 539
Query: 102 LELLYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLLSS 141
LELL L A++ +G+LT+ +G MAE PL P AK++++S
Sbjct: 540 LELLNYLAALNDDGDLTE-LGSMMAEFPLDPQLAKMVIAS 578
Score = 114 (45.2 bits), Expect = 4.6e-47, Sum P(4) = 4.6e-47
Identities = 21/38 (55%), Positives = 30/38 (78%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILM 38
MT+G+L+ +DP +E+Y VI+LD+ HERT+ TDILM
Sbjct: 236 MTDGMLLREAMNDPLLERYGVIILDEAHERTLATDILM 273
Score = 52 (23.4 bits), Expect = 4.8e-20, Sum P(4) = 4.8e-20
Identities = 8/20 (40%), Positives = 16/20 (80%)
Query: 434 IIGILKQYHNQREDLKLLIL 453
++G+LK+ QR DLK++++
Sbjct: 272 LMGVLKEVVRQRSDLKVIVM 291
Score = 38 (18.4 bits), Expect = 1.1e-29, Sum P(3) = 1.1e-29
Identities = 7/17 (41%), Positives = 9/17 (52%)
Query: 581 VFFSFFQYLLEAGWCYD 597
V+ +F Q WCYD
Sbjct: 630 VYHAFKQNHESVQWCYD 646
Score = 37 (18.1 bits), Expect = 4.6e-47, Sum P(4) = 4.6e-47
Identities = 10/26 (38%), Positives = 13/26 (50%)
Query: 650 MTE-GILMREMMTDPLLRKYSVIMLD 674
+TE G +M E DP L K + D
Sbjct: 555 LTELGSMMAEFPLDPQLAKMVIASCD 580
>UNIPROTKB|O43143 [details] [associations]
symbol:DHX15 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX15" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0003724 "RNA helicase
activity" evidence=TAS] [GO:0008380 "RNA splicing" evidence=IC]
[GO:0005689 "U12-type spliceosomal complex" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 EMBL:AB001636 GO:GO:0005524 GO:GO:0005730
GO:GO:0008380 GO:GO:0006397 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 GO:GO:0003724
KO:K12820 OMA:TVLQIHA EMBL:AF279891 EMBL:BC035974 IPI:IPI00396435
PIR:JC5785 RefSeq:NP_001349.2 UniGene:Hs.696074
ProteinModelPortal:O43143 SMR:O43143 DIP:DIP-38211N IntAct:O43143
MINT:MINT-5003827 STRING:O43143 PhosphoSite:O43143
SWISS-2DPAGE:O43143 PaxDb:O43143 PRIDE:O43143
Ensembl:ENST00000336812 GeneID:1665 KEGG:hsa:1665 UCSC:uc003gqx.3
CTD:1665 GeneCards:GC04M024519 HGNC:HGNC:2738 HPA:HPA047047
MIM:603403 neXtProt:NX_O43143 PharmGKB:PA27204 HOVERGEN:HBG039428
InParanoid:O43143 OrthoDB:EOG4K6G3N GenomeRNAi:1665 NextBio:6852
ArrayExpress:O43143 Bgee:O43143 CleanEx:HS_DHX15
Genevestigator:O43143 GermOnline:ENSG00000109606 GO:GO:0005689
Uniprot:O43143
Length = 795
Score = 306 (112.8 bits), Expect = 4.6e-47, Sum P(4) = 4.6e-47
Identities = 70/190 (36%), Positives = 113/190 (59%)
Query: 347 KRTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYYSNDPVVNYVQGVV 406
+R+ LK+I+ SAT+DA + Q Y N +L++ G +PV ++Y+ +P +Y++ +
Sbjct: 282 QRSDLKVIVMSATLDAGKF-QIY----FDNCPLLTIPGRTHPVEIFYTPEPERDYLEAAI 336
Query: 407 DTAIKIHE-SMPVGDILAFVIGLEQIEHIIGILKQYHNQREDL-----KLLILPMHGSLP 460
T I+IH GD+L F+ G E+I+ K+ + +DL + I+P++ +LP
Sbjct: 337 RTVIQIHMCEEEEGDLLLFLTGQEEIDEAC---KRIKREVDDLGPEVGDIKIIPLYSTLP 393
Query: 461 NNEQIKVFRPTPRAM------RKIVIATNIAETSITIPGIVYVIDPGFVKARWFNPNTLT 514
+Q ++F P P RK+V++TNIAETS+TI G+V+VIDPGF K + +NP
Sbjct: 394 PQQQQRIFEPPPPKKQNGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRV 453
Query: 515 NSLVVVPISK 524
SL+V ISK
Sbjct: 454 ESLLVTAISK 463
Score = 285 (105.4 bits), Expect = 4.2e-38, Sum P(2) = 4.2e-38
Identities = 51/97 (52%), Positives = 76/97 (78%)
Query: 601 IGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTKIKYMTEGILMREMM 660
+ T+PRR++ S+A RV++E+ LG VGY+IRF+DC++ T +KYMT+G+L+RE M
Sbjct: 188 VACTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAK-TILKYMTDGMLLREAM 246
Query: 661 TDPLLRKYSVIMLDEVHERTIFTDILMGLLKKILKDK 697
DPLL +Y VI+LDE HERT+ TDILMG+LK++++ +
Sbjct: 247 NDPLLERYGVIILDEAHERTLATDILMGVLKEVVRQR 283
Score = 210 (79.0 bits), Expect = 4.6e-47, Sum P(4) = 4.6e-47
Identities = 46/150 (30%), Positives = 81/150 (54%)
Query: 700 DFECSDEIASILSLLQVQDIFIKPSSGALSLKARVLRRNFEVEQGDLLTLLNIFKFYEKQ 759
D+ CS+E+ SI ++L V F++P+ + +R F GD LTLLN++ +++
Sbjct: 580 DYNCSNEVLSITAMLSVPQCFVRPTEAKKAADEAKMR--FAHIDGDHLTLLNVYHAFKQN 637
Query: 760 ENKKQFCHKYFFNYKVLKRAAELKNQMILLLKKSSIPL----VTSPRNTNAVLKCLTNGF 815
Q+C+ F NY+ L A ++ Q+ ++ + ++P TS + K L G+
Sbjct: 638 HESVQWCYDNFINYRSLMSADNVRQQLSRIMDRFNLPRRSTDFTSRDYYINIRKALVTGY 697
Query: 816 FSNAAYLHYSGVYRTVRGNEDLYIHPSSVL 845
F A+L +G Y TV+ N+ + +HPS+VL
Sbjct: 698 FMQVAHLERTGHYLTVKDNQVVQLHPSTVL 727
Score = 197 (74.4 bits), Expect = 1.6e-35, Sum P(3) = 1.6e-35
Identities = 45/100 (45%), Positives = 67/100 (67%)
Query: 43 KFSRLYTEASF-SQLNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRVA 101
K RLYTE ++ +++ + T PE+ R+ L S VLQLK LGI +++ F F PP + L A
Sbjct: 480 KCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMRA 539
Query: 102 LELLYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLLSS 141
LELL L A++ +G+LT+ +G MAE PL P AK++++S
Sbjct: 540 LELLNYLAALNDDGDLTE-LGSMMAEFPLDPQLAKMVIAS 578
Score = 114 (45.2 bits), Expect = 4.6e-47, Sum P(4) = 4.6e-47
Identities = 21/38 (55%), Positives = 30/38 (78%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILM 38
MT+G+L+ +DP +E+Y VI+LD+ HERT+ TDILM
Sbjct: 236 MTDGMLLREAMNDPLLERYGVIILDEAHERTLATDILM 273
Score = 52 (23.4 bits), Expect = 4.8e-20, Sum P(4) = 4.8e-20
Identities = 8/20 (40%), Positives = 16/20 (80%)
Query: 434 IIGILKQYHNQREDLKLLIL 453
++G+LK+ QR DLK++++
Sbjct: 272 LMGVLKEVVRQRSDLKVIVM 291
Score = 38 (18.4 bits), Expect = 1.1e-29, Sum P(3) = 1.1e-29
Identities = 7/17 (41%), Positives = 9/17 (52%)
Query: 581 VFFSFFQYLLEAGWCYD 597
V+ +F Q WCYD
Sbjct: 630 VYHAFKQNHESVQWCYD 646
Score = 37 (18.1 bits), Expect = 4.6e-47, Sum P(4) = 4.6e-47
Identities = 10/26 (38%), Positives = 13/26 (50%)
Query: 650 MTE-GILMREMMTDPLLRKYSVIMLD 674
+TE G +M E DP L K + D
Sbjct: 555 LTELGSMMAEFPLDPQLAKMVIASCD 580
>UNIPROTKB|F1S5A8 [details] [associations]
symbol:DHX15 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005689 "U12-type spliceosomal complex" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00650000093246 OMA:TVLQIHA GO:GO:0005689
EMBL:CU633303 Ensembl:ENSSSCT00000009580 Uniprot:F1S5A8
Length = 795
Score = 306 (112.8 bits), Expect = 4.6e-47, Sum P(4) = 4.6e-47
Identities = 70/190 (36%), Positives = 113/190 (59%)
Query: 347 KRTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYYSNDPVVNYVQGVV 406
+R+ LK+I+ SAT+DA + Q Y N +L++ G +PV ++Y+ +P +Y++ +
Sbjct: 282 QRSDLKVIVMSATLDAGKF-QIY----FDNCPLLTIPGRTHPVEIFYTPEPERDYLEAAI 336
Query: 407 DTAIKIHE-SMPVGDILAFVIGLEQIEHIIGILKQYHNQREDL-----KLLILPMHGSLP 460
T I+IH GD+L F+ G E+I+ K+ + +DL + I+P++ +LP
Sbjct: 337 RTVIQIHMCEEEEGDLLLFLTGQEEIDEAC---KRIKREVDDLGPEVGDIKIIPLYSTLP 393
Query: 461 NNEQIKVFRPTPRAM------RKIVIATNIAETSITIPGIVYVIDPGFVKARWFNPNTLT 514
+Q ++F P P RK+V++TNIAETS+TI G+V+VIDPGF K + +NP
Sbjct: 394 PQQQQRIFEPPPPKKQNGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRV 453
Query: 515 NSLVVVPISK 524
SL+V ISK
Sbjct: 454 ESLLVTAISK 463
Score = 285 (105.4 bits), Expect = 4.2e-38, Sum P(2) = 4.2e-38
Identities = 51/97 (52%), Positives = 76/97 (78%)
Query: 601 IGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTKIKYMTEGILMREMM 660
+ T+PRR++ S+A RV++E+ LG VGY+IRF+DC++ T +KYMT+G+L+RE M
Sbjct: 188 VACTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAK-TILKYMTDGMLLREAM 246
Query: 661 TDPLLRKYSVIMLDEVHERTIFTDILMGLLKKILKDK 697
DPLL +Y VI+LDE HERT+ TDILMG+LK++++ +
Sbjct: 247 NDPLLERYGVIILDEAHERTLATDILMGVLKEVVRQR 283
Score = 210 (79.0 bits), Expect = 4.6e-47, Sum P(4) = 4.6e-47
Identities = 46/150 (30%), Positives = 81/150 (54%)
Query: 700 DFECSDEIASILSLLQVQDIFIKPSSGALSLKARVLRRNFEVEQGDLLTLLNIFKFYEKQ 759
D+ CS+E+ SI ++L V F++P+ + +R F GD LTLLN++ +++
Sbjct: 580 DYNCSNEVLSITAMLSVPQCFVRPTEAKKAADEAKMR--FAHIDGDHLTLLNVYHAFKQN 637
Query: 760 ENKKQFCHKYFFNYKVLKRAAELKNQMILLLKKSSIPL----VTSPRNTNAVLKCLTNGF 815
Q+C+ F NY+ L A ++ Q+ ++ + ++P TS + K L G+
Sbjct: 638 HESVQWCYDNFINYRSLMSADNVRQQLSRIMDRFNLPRRSTDFTSRDYYINIRKALVTGY 697
Query: 816 FSNAAYLHYSGVYRTVRGNEDLYIHPSSVL 845
F A+L +G Y TV+ N+ + +HPS+VL
Sbjct: 698 FMQVAHLERTGHYLTVKDNQVVQLHPSTVL 727
Score = 197 (74.4 bits), Expect = 1.6e-35, Sum P(3) = 1.6e-35
Identities = 45/100 (45%), Positives = 67/100 (67%)
Query: 43 KFSRLYTEASF-SQLNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRVA 101
K RLYTE ++ +++ + T PE+ R+ L S VLQLK LGI +++ F F PP + L A
Sbjct: 480 KCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMRA 539
Query: 102 LELLYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLLSS 141
LELL L A++ +G+LT+ +G MAE PL P AK++++S
Sbjct: 540 LELLNYLAALNDDGDLTE-LGSMMAEFPLDPQLAKMVIAS 578
Score = 114 (45.2 bits), Expect = 4.6e-47, Sum P(4) = 4.6e-47
Identities = 21/38 (55%), Positives = 30/38 (78%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILM 38
MT+G+L+ +DP +E+Y VI+LD+ HERT+ TDILM
Sbjct: 236 MTDGMLLREAMNDPLLERYGVIILDEAHERTLATDILM 273
Score = 52 (23.4 bits), Expect = 4.8e-20, Sum P(4) = 4.8e-20
Identities = 8/20 (40%), Positives = 16/20 (80%)
Query: 434 IIGILKQYHNQREDLKLLIL 453
++G+LK+ QR DLK++++
Sbjct: 272 LMGVLKEVVRQRSDLKVIVM 291
Score = 38 (18.4 bits), Expect = 1.1e-29, Sum P(3) = 1.1e-29
Identities = 7/17 (41%), Positives = 9/17 (52%)
Query: 581 VFFSFFQYLLEAGWCYD 597
V+ +F Q WCYD
Sbjct: 630 VYHAFKQNHESVQWCYD 646
Score = 37 (18.1 bits), Expect = 4.6e-47, Sum P(4) = 4.6e-47
Identities = 10/26 (38%), Positives = 13/26 (50%)
Query: 650 MTE-GILMREMMTDPLLRKYSVIMLD 674
+TE G +M E DP L K + D
Sbjct: 555 LTELGSMMAEFPLDPQLAKMVIASCD 580
>MGI|MGI:1099786 [details] [associations]
symbol:Dhx15 "DEAH (Asp-Glu-Ala-His) box polypeptide 15"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005689 "U12-type spliceosomal complex" evidence=ISO]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
MGI:MGI:1099786 GO:GO:0005524 GO:GO:0005730 GO:GO:0008380
GO:GO:0006397 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 KO:K12820 OMA:TVLQIHA CTD:1665
HOVERGEN:HBG039428 OrthoDB:EOG4K6G3N GO:GO:0005689 EMBL:AF017153
EMBL:BC003745 IPI:IPI00128818 RefSeq:NP_031865.2 UniGene:Mm.993
ProteinModelPortal:O35286 SMR:O35286 STRING:O35286
PhosphoSite:O35286 PaxDb:O35286 PRIDE:O35286
Ensembl:ENSMUST00000031061 GeneID:13204 KEGG:mmu:13204
InParanoid:O35286 NextBio:283358 Bgee:O35286 CleanEx:MM_DHX15
Genevestigator:O35286 GermOnline:ENSMUSG00000029169 Uniprot:O35286
Length = 795
Score = 306 (112.8 bits), Expect = 4.6e-47, Sum P(4) = 4.6e-47
Identities = 70/190 (36%), Positives = 113/190 (59%)
Query: 347 KRTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYYSNDPVVNYVQGVV 406
+R+ LK+I+ SAT+DA + Q Y N +L++ G +PV ++Y+ +P +Y++ +
Sbjct: 282 QRSDLKVIVMSATLDAGKF-QIY----FDNCPLLTIPGRTHPVEIFYTPEPERDYLEAAI 336
Query: 407 DTAIKIHE-SMPVGDILAFVIGLEQIEHIIGILKQYHNQREDL-----KLLILPMHGSLP 460
T I+IH GD+L F+ G E+I+ K+ + +DL + I+P++ +LP
Sbjct: 337 RTVIQIHMCEEEEGDLLLFLTGQEEIDEAC---KRIKREVDDLGPEVGDIKIIPLYSTLP 393
Query: 461 NNEQIKVFRPTPRAM------RKIVIATNIAETSITIPGIVYVIDPGFVKARWFNPNTLT 514
+Q ++F P P RK+V++TNIAETS+TI G+V+VIDPGF K + +NP
Sbjct: 394 PQQQQRIFEPPPPKKQNGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRV 453
Query: 515 NSLVVVPISK 524
SL+V ISK
Sbjct: 454 ESLLVTAISK 463
Score = 285 (105.4 bits), Expect = 4.2e-38, Sum P(2) = 4.2e-38
Identities = 51/97 (52%), Positives = 76/97 (78%)
Query: 601 IGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTKIKYMTEGILMREMM 660
+ T+PRR++ S+A RV++E+ LG VGY+IRF+DC++ T +KYMT+G+L+RE M
Sbjct: 188 VACTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAK-TILKYMTDGMLLREAM 246
Query: 661 TDPLLRKYSVIMLDEVHERTIFTDILMGLLKKILKDK 697
DPLL +Y VI+LDE HERT+ TDILMG+LK++++ +
Sbjct: 247 NDPLLERYGVIILDEAHERTLATDILMGVLKEVVRQR 283
Score = 210 (79.0 bits), Expect = 4.6e-47, Sum P(4) = 4.6e-47
Identities = 46/150 (30%), Positives = 81/150 (54%)
Query: 700 DFECSDEIASILSLLQVQDIFIKPSSGALSLKARVLRRNFEVEQGDLLTLLNIFKFYEKQ 759
D+ CS+E+ SI ++L V F++P+ + +R F GD LTLLN++ +++
Sbjct: 580 DYNCSNEVLSITAMLSVPQCFVRPTEAKKAADEAKMR--FAHIDGDHLTLLNVYHAFKQN 637
Query: 760 ENKKQFCHKYFFNYKVLKRAAELKNQMILLLKKSSIPL----VTSPRNTNAVLKCLTNGF 815
Q+C+ F NY+ L A ++ Q+ ++ + ++P TS + K L G+
Sbjct: 638 HESVQWCYDNFINYRSLMSADNVRQQLSRIMDRFNLPRRSTDFTSRDYYINIRKALVTGY 697
Query: 816 FSNAAYLHYSGVYRTVRGNEDLYIHPSSVL 845
F A+L +G Y TV+ N+ + +HPS+VL
Sbjct: 698 FMQVAHLERTGHYLTVKDNQVVQLHPSTVL 727
Score = 197 (74.4 bits), Expect = 1.6e-35, Sum P(3) = 1.6e-35
Identities = 45/100 (45%), Positives = 67/100 (67%)
Query: 43 KFSRLYTEASF-SQLNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRVA 101
K RLYTE ++ +++ + T PE+ R+ L S VLQLK LGI +++ F F PP + L A
Sbjct: 480 KCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMRA 539
Query: 102 LELLYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLLSS 141
LELL L A++ +G+LT+ +G MAE PL P AK++++S
Sbjct: 540 LELLNYLAALNDDGDLTE-LGSMMAEFPLDPQLAKMVIAS 578
Score = 114 (45.2 bits), Expect = 4.6e-47, Sum P(4) = 4.6e-47
Identities = 21/38 (55%), Positives = 30/38 (78%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILM 38
MT+G+L+ +DP +E+Y VI+LD+ HERT+ TDILM
Sbjct: 236 MTDGMLLREAMNDPLLERYGVIILDEAHERTLATDILM 273
Score = 52 (23.4 bits), Expect = 4.8e-20, Sum P(4) = 4.8e-20
Identities = 8/20 (40%), Positives = 16/20 (80%)
Query: 434 IIGILKQYHNQREDLKLLIL 453
++G+LK+ QR DLK++++
Sbjct: 272 LMGVLKEVVRQRSDLKVIVM 291
Score = 38 (18.4 bits), Expect = 1.1e-29, Sum P(3) = 1.1e-29
Identities = 7/17 (41%), Positives = 9/17 (52%)
Query: 581 VFFSFFQYLLEAGWCYD 597
V+ +F Q WCYD
Sbjct: 630 VYHAFKQNHESVQWCYD 646
Score = 37 (18.1 bits), Expect = 4.6e-47, Sum P(4) = 4.6e-47
Identities = 10/26 (38%), Positives = 13/26 (50%)
Query: 650 MTE-GILMREMMTDPLLRKYSVIMLD 674
+TE G +M E DP L K + D
Sbjct: 555 LTELGSMMAEFPLDPQLAKMVIASCD 580
>RGD|1308072 [details] [associations]
symbol:Dhx15 "DEAH (Asp-Glu-Ala-His) box polypeptide 15"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005689 "U12-type
spliceosomal complex" evidence=IEA;ISO] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 RGD:1308072 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K12820 GeneTree:ENSGT00650000093246
OMA:TVLQIHA CTD:1665 OrthoDB:EOG4K6G3N GO:GO:0005689 EMBL:CH473963
IPI:IPI00361832 RefSeq:NP_001178526.1 UniGene:Rn.55597
Ensembl:ENSRNOT00000005126 GeneID:289693 KEGG:rno:289693
NextBio:630162 Uniprot:D3ZD97
Length = 795
Score = 306 (112.8 bits), Expect = 4.6e-47, Sum P(4) = 4.6e-47
Identities = 70/190 (36%), Positives = 113/190 (59%)
Query: 347 KRTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYYSNDPVVNYVQGVV 406
+R+ LK+I+ SAT+DA + Q Y N +L++ G +PV ++Y+ +P +Y++ +
Sbjct: 282 QRSDLKVIVMSATLDAGKF-QIY----FDNCPLLTIPGRTHPVEIFYTPEPERDYLEAAI 336
Query: 407 DTAIKIHE-SMPVGDILAFVIGLEQIEHIIGILKQYHNQREDL-----KLLILPMHGSLP 460
T I+IH GD+L F+ G E+I+ K+ + +DL + I+P++ +LP
Sbjct: 337 RTVIQIHMCEEEEGDLLLFLTGQEEIDEAC---KRIKREVDDLGPEVGDIKIIPLYSTLP 393
Query: 461 NNEQIKVFRPTPRAM------RKIVIATNIAETSITIPGIVYVIDPGFVKARWFNPNTLT 514
+Q ++F P P RK+V++TNIAETS+TI G+V+VIDPGF K + +NP
Sbjct: 394 PQQQQRIFEPPPPKKQNGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRV 453
Query: 515 NSLVVVPISK 524
SL+V ISK
Sbjct: 454 ESLLVTAISK 463
Score = 285 (105.4 bits), Expect = 4.2e-38, Sum P(2) = 4.2e-38
Identities = 51/97 (52%), Positives = 76/97 (78%)
Query: 601 IGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTKIKYMTEGILMREMM 660
+ T+PRR++ S+A RV++E+ LG VGY+IRF+DC++ T +KYMT+G+L+RE M
Sbjct: 188 VACTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAK-TILKYMTDGMLLREAM 246
Query: 661 TDPLLRKYSVIMLDEVHERTIFTDILMGLLKKILKDK 697
DPLL +Y VI+LDE HERT+ TDILMG+LK++++ +
Sbjct: 247 NDPLLERYGVIILDEAHERTLATDILMGVLKEVVRQR 283
Score = 210 (79.0 bits), Expect = 4.6e-47, Sum P(4) = 4.6e-47
Identities = 46/150 (30%), Positives = 81/150 (54%)
Query: 700 DFECSDEIASILSLLQVQDIFIKPSSGALSLKARVLRRNFEVEQGDLLTLLNIFKFYEKQ 759
D+ CS+E+ SI ++L V F++P+ + +R F GD LTLLN++ +++
Sbjct: 580 DYNCSNEVLSITAMLSVPQCFVRPTEAKKAADEAKMR--FAHIDGDHLTLLNVYHAFKQN 637
Query: 760 ENKKQFCHKYFFNYKVLKRAAELKNQMILLLKKSSIPL----VTSPRNTNAVLKCLTNGF 815
Q+C+ F NY+ L A ++ Q+ ++ + ++P TS + K L G+
Sbjct: 638 HESVQWCYDNFINYRSLMSADNVRQQLSRIMDRFNLPRRSTDFTSRDYYINIRKALVTGY 697
Query: 816 FSNAAYLHYSGVYRTVRGNEDLYIHPSSVL 845
F A+L +G Y TV+ N+ + +HPS+VL
Sbjct: 698 FMQVAHLERTGHYLTVKDNQVVQLHPSTVL 727
Score = 197 (74.4 bits), Expect = 1.6e-35, Sum P(3) = 1.6e-35
Identities = 45/100 (45%), Positives = 67/100 (67%)
Query: 43 KFSRLYTEASF-SQLNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRVA 101
K RLYTE ++ +++ + T PE+ R+ L S VLQLK LGI +++ F F PP + L A
Sbjct: 480 KCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMRA 539
Query: 102 LELLYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLLSS 141
LELL L A++ +G+LT+ +G MAE PL P AK++++S
Sbjct: 540 LELLNYLAALNDDGDLTE-LGSMMAEFPLDPQLAKMVIAS 578
Score = 114 (45.2 bits), Expect = 4.6e-47, Sum P(4) = 4.6e-47
Identities = 21/38 (55%), Positives = 30/38 (78%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILM 38
MT+G+L+ +DP +E+Y VI+LD+ HERT+ TDILM
Sbjct: 236 MTDGMLLREAMNDPLLERYGVIILDEAHERTLATDILM 273
Score = 52 (23.4 bits), Expect = 4.8e-20, Sum P(4) = 4.8e-20
Identities = 8/20 (40%), Positives = 16/20 (80%)
Query: 434 IIGILKQYHNQREDLKLLIL 453
++G+LK+ QR DLK++++
Sbjct: 272 LMGVLKEVVRQRSDLKVIVM 291
Score = 38 (18.4 bits), Expect = 1.1e-29, Sum P(3) = 1.1e-29
Identities = 7/17 (41%), Positives = 9/17 (52%)
Query: 581 VFFSFFQYLLEAGWCYD 597
V+ +F Q WCYD
Sbjct: 630 VYHAFKQNHESVQWCYD 646
Score = 37 (18.1 bits), Expect = 4.6e-47, Sum P(4) = 4.6e-47
Identities = 10/26 (38%), Positives = 13/26 (50%)
Query: 650 MTE-GILMREMMTDPLLRKYSVIMLD 674
+TE G +M E DP L K + D
Sbjct: 555 LTELGSMMAEFPLDPQLAKMVIASCD 580
>ASPGD|ASPL0000014477 [details] [associations]
symbol:AN4032 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 EMBL:BN001302
EMBL:AACD01000065 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 KO:K12815 OMA:PSRSTWE OrthoDB:EOG4GQTD2
RefSeq:XP_661636.1 EnsemblFungi:CADANIAT00004650 GeneID:2873454
KEGG:ani:AN4032.2 Uniprot:Q5B5Z8
Length = 924
Score = 312 (114.9 bits), Expect = 9.9e-47, Sum P(3) = 9.9e-47
Identities = 66/179 (36%), Positives = 104/179 (58%)
Query: 347 KRTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYYSNDPVVNYVQGVV 406
+R LKLI++SAT++AE +F+ A + G +PV V++S P +YV V
Sbjct: 330 RRRDLKLIVTSATMNAERFSRFFG-----GAPEFIIPGRTFPVDVHFSRTPCEDYVDSAV 384
Query: 407 DTAIKIHESMPVGDILAFVIGLEQIEHIIGILKQYHNQREDL-KLLILPMHGSLPNNEQI 465
+ IH S GDIL F+ G E IE ++ + D KL ILP++ +P +Q
Sbjct: 385 KQVLAIHVSQGPGDILVFMTGQEDIEATCELVDERLKLLNDPPKLSILPIYSQMPAEQQA 444
Query: 466 KVFRPTPRAMRKIVIATNIAETSITIPGIVYVIDPGFVKARWFNPNTLTNSLVVVPISK 524
K+F +RK+++ATNIAETS+T+ GI++V+D G+ K + +NP ++L + PIS+
Sbjct: 445 KIFERAAPGVRKVIVATNIAETSLTVDGIMFVVDSGYSKLKVYNPKMGMDTLQITPISQ 503
Score = 294 (108.6 bits), Expect = 3.6e-22, P = 3.6e-22
Identities = 61/116 (52%), Positives = 81/116 (69%)
Query: 587 QYLLEAGWCYDTKLIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTK 646
Q+L E G+ +IG T+PRR++ S+A RVSEE+ LG VGY IRF+DCT + T
Sbjct: 223 QFLYEDGYA-KFGMIGCTQPRRVAAMSVAKRVSEEMEVDLGDLVGYAIRFEDCTGPN-TA 280
Query: 647 IKYMTEGILMREMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKILKDKERDFE 702
IKYMT+G+L+RE + L KYS I++DE HER + TD+LMGLLKKIL + RD +
Sbjct: 281 IKYMTDGVLLRESLVQTDLDKYSCIIMDEAHERALNTDVLMGLLKKILA-RRRDLK 335
Score = 220 (82.5 bits), Expect = 9.9e-47, Sum P(3) = 9.9e-47
Identities = 61/236 (25%), Positives = 118/236 (50%)
Query: 618 VSEELRTTLGHTVGYTIRFDDCTTEDVTKIKYMTEGILMREMMTDPLLRKYSVIMLDEVH 677
+ E RT+L +TV + +D+ +M +E ++ L +S+ LD +
Sbjct: 539 IPEIQRTSLSNTV---LLLKSLGVKDLLDFDFMDPP--PQETISTSLFELWSLGALDNLG 593
Query: 678 ERTIF----TDILMGL-LKKILKDKERDFECSDEIASILSLLQVQDIFIKPSSGALSLKA 732
+ T T M L K++ + CS+E+ +I+S+L V ++F +P A
Sbjct: 594 DLTHLGRQMTPFPMDPPLAKLIITAAEQYGCSEEMLTIVSMLSVPNVFYRPKERQEESDA 653
Query: 733 RVLRRNFEVEQGDLLTLLNIFKFYEKQENKKQFCHKYFFNYKVLKRAAELKNQMILLLKK 792
R F V + D LTLL+++ ++ +C K+F + K L+RA E+++Q+ ++
Sbjct: 654 A--REKFFVPESDHLTLLHVYTQWKSNGYSDHWCTKHFLHAKTLRRAKEVRDQLNDIMVM 711
Query: 793 SSIPLVTSPRNTNAVLKCLTNGFFSNAAYLHYSGVYRTVRGNEDLYIHPSSVLYTL 848
+PL++ + + + KC+ +GF+ AA + G + +R + + +HP+S LY L
Sbjct: 712 QKLPLISCGTDWDEIRKCICSGFYHQAARVKGIGEFINLRTSVSMALHPTSALYGL 767
Score = 194 (73.4 bits), Expect = 9.8e-16, Sum P(2) = 9.8e-16
Identities = 44/111 (39%), Positives = 70/111 (63%)
Query: 43 KFSRLYTEASF-SQLNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRVA 101
K RLYTE ++ +++ T PE+QRT LS+ VL LK+LG+ ++L F F PPP + + +
Sbjct: 520 KAYRLYTEVAYKNEMYLQTIPEIQRTSLSNTVLLLKSLGVKDLLDFDFMDPPPQETISTS 579
Query: 102 LELLYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLLSSGSVLDSAVEIL 152
L L+SLGA+D G+LT +G M P+ P AK+++++ + E+L
Sbjct: 580 LFELWSLGALDNLGDLTH-LGRQMTPFPMDPPLAKLIITAAEQYGCSEEML 629
Score = 93 (37.8 bits), Expect = 9.9e-47, Sum P(3) = 9.9e-47
Identities = 17/43 (39%), Positives = 28/43 (65%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILMECSRK 43
MT+G+L+ ++KYS I++D+ HER + TD+LM +K
Sbjct: 284 MTDGVLLRESLVQTDLDKYSCIIMDEAHERALNTDVLMGLLKK 326
Score = 45 (20.9 bits), Expect = 1.5e-13, Sum P(2) = 1.5e-13
Identities = 8/19 (42%), Positives = 15/19 (78%)
Query: 434 IIGILKQYHNQREDLKLLI 452
++G+LK+ +R DLKL++
Sbjct: 320 LMGLLKKILARRRDLKLIV 338
>DICTYBASE|DDB_G0285843 [details] [associations]
symbol:helD "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=ISS] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISS] [GO:0000375 "RNA splicing, via
transesterification reactions" evidence=ISS] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 dictyBase:DDB_G0285843 GO:GO:0005524
GenomeReviews:CM000153_GR GO:GO:0005681 GO:GO:0003676
EMBL:AAFI02000082 GO:GO:0000398 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
KO:K12815 RefSeq:XP_638016.1 EnsemblProtists:DDB0191460
GeneID:8625367 KEGG:ddi:DDB_G0285843 InParanoid:Q54MH4
ProtClustDB:CLSZ2846702 Uniprot:Q54MH4
Length = 1387
Score = 327 (120.2 bits), Expect = 2.7e-46, Sum P(3) = 2.7e-46
Identities = 76/222 (34%), Positives = 116/222 (52%)
Query: 347 KRTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYYSNDPVVNYVQGVV 406
+R +KLI++SAT+D+++ F+ + + ++ G +PV V +S P +YV V
Sbjct: 801 RRYDMKLIVTSATMDSKKFSMFFG-----DVPVFTIPGRTFPVDVLWSKTPCEDYVDSAV 855
Query: 407 DTAIKIHESMPVGDILAFVIGLEQIEHIIGILKQYHNQR--EDLKLLILPMHGSLPNNEQ 464
+ IH + VGDIL F+ G E IE +++ Q + L +LP++ LP++ Q
Sbjct: 856 KQILSIHVTQGVGDILVFMTGQEDIETTCATVEERIKQLGPQAPPLTLLPIYSQLPSDMQ 915
Query: 465 IKVFRPTPRAMRKIVIATNIAETSITIPGIVYVIDPGFVKARWFNPNTLTNSLVVVPISK 524
K+F RK +IATNIAETS+T+ GI+YVID G+ K + +NP +SL V PISK
Sbjct: 916 AKIFEKADNGSRKCIIATNIAETSLTVDGILYVIDTGYCKLKVYNPRVGMDSLQVTPISK 975
Query: 525 XXXXXXXXXXXXXXXXHVYRKNFMYNR-LFIHFCVSRNIPTI 565
YR +Y F + + NIP I
Sbjct: 976 ANANQRSGRAGRTGPGRCYR---LYTESAFKYELMDNNIPEI 1014
Score = 314 (115.6 bits), Expect = 9.6e-37, Sum P(3) = 9.6e-37
Identities = 61/108 (56%), Positives = 82/108 (75%)
Query: 587 QYLLEAGWCYDTKLIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTK 646
QYL E G+ K IG T+PRR++ S+A RVSEE+ TLG+ VGY+IRF+DCT+ + T
Sbjct: 694 QYLYEDGYSKFGK-IGCTQPRRVAAVSVAKRVSEEMSVTLGNEVGYSIRFEDCTSNE-TA 751
Query: 647 IKYMTEGILMREMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKIL 694
IKYMT+GIL+RE DP L KYS I++DE HER++ TD+L G+LKK++
Sbjct: 752 IKYMTDGILLRESFNDPNLDKYSAIIMDEAHERSLNTDVLFGILKKVM 799
Score = 201 (75.8 bits), Expect = 1.6e-32, Sum P(3) = 1.6e-32
Identities = 41/95 (43%), Positives = 64/95 (67%)
Query: 46 RLYTEASFS-QLNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRVALEL 104
RLYTE++F +L + PE+QRT L + VL LK++G+ N+L F F PPP N+ ++
Sbjct: 995 RLYTESAFKYELMDNNIPEIQRTNLGNVVLNLKSMGVKNLLDFDFMDPPPQDNILNSMYQ 1054
Query: 105 LYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLL 139
L+ LGA+D G +T P+G+ M+E PL P +K+++
Sbjct: 1055 LWVLGALDDQGQIT-PLGKRMSEFPLDPPLSKMVI 1088
Score = 185 (70.2 bits), Expect = 2.7e-46, Sum P(3) = 2.7e-46
Identities = 36/146 (24%), Positives = 82/146 (56%)
Query: 703 CSDEIASILSLLQVQDIFIKPSSGALSLKARVLRRNFEVEQGDLLTLLNIFKFYEKQENK 762
C +I +I+S+L + +F +P GA ++ R F V + D LTLL++++ ++
Sbjct: 1095 CGQDIVTIVSMLSMPSVFYRPK-GAEE-ESDASREKFFVPESDHLTLLHVYQQWKINNYS 1152
Query: 763 KQFCHKYFFNYKVLKRAAELKNQMILLLKKSSIPLVTSPRNTNAVLKCLTNGFFSNAAYL 822
Q+C +++ + K +++ E++ Q++ ++ + + + + N + + K +T+ +F ++A +
Sbjct: 1153 SQWCAEHYIHIKAMRKVREVRGQLLDIMVQHDMKVESCGSNWDIIRKAITSSYFHHSAKI 1212
Query: 823 HYSGVYRTVRGNEDLYIHPSSVLYTL 848
G Y +R ++HP+S LY L
Sbjct: 1213 KGIGEYVNMRNGMPCFLHPTSALYGL 1238
Score = 116 (45.9 bits), Expect = 2.7e-46, Sum P(3) = 2.7e-46
Identities = 22/49 (44%), Positives = 35/49 (71%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILMECSRK-FSRLY 48
MT+GIL+ +DP+++KYS I++D+ HER++ TD+L +K SR Y
Sbjct: 755 MTDGILLRESFNDPNLDKYSAIIMDEAHERSLNTDVLFGILKKVMSRRY 803
Score = 46 (21.3 bits), Expect = 1.5e-08, Sum P(3) = 1.5e-08
Identities = 8/19 (42%), Positives = 15/19 (78%)
Query: 434 IIGILKQYHNQREDLKLLI 452
+ GILK+ ++R D+KL++
Sbjct: 791 LFGILKKVMSRRYDMKLIV 809
Score = 38 (18.4 bits), Expect = 3.6e-38, Sum P(3) = 3.6e-38
Identities = 9/17 (52%), Positives = 9/17 (52%)
Query: 265 EFLTEMGCRMDFEYISR 281
EFL GCR D I R
Sbjct: 657 EFLPIFGCRNDLMKIIR 673
Score = 38 (18.4 bits), Expect = 5.2e-31, Sum P(3) = 5.2e-31
Identities = 9/19 (47%), Positives = 13/19 (68%)
Query: 690 LKKILKDKERDFE-CSDEI 707
+KK LKDK+R + D+I
Sbjct: 1279 IKKSLKDKKRKLDPIKDKI 1297
>WB|WBGene00018967 [details] [associations]
symbol:F56D2.6 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0016246 "RNA interference" evidence=IMP] [GO:0006898
"receptor-mediated endocytosis" evidence=IMP] [GO:0002009
"morphogenesis of an epithelium" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0042127
"regulation of cell proliferation" evidence=IMP] [GO:0040020
"regulation of meiosis" evidence=IMP] [GO:0040022 "feminization of
hermaphroditic germ-line" evidence=IMP] [GO:0007281 "germ cell
development" evidence=IMP] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 GO:GO:0005739 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0002009 GO:GO:0006898
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 GO:GO:0016246
GO:GO:0008380 GO:GO:0006397 GO:GO:0040011 GO:GO:0003676
GO:GO:0042127 GO:GO:0040035 GO:GO:0007281 GO:GO:0040020
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0030686
GO:GO:0006364 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 GO:GO:0040022 HOGENOM:HOG000175261 EMBL:FO080358
KO:K12820 PIR:T16482 RefSeq:NP_741147.1 ProteinModelPortal:Q20875
SMR:Q20875 STRING:Q20875 PaxDb:Q20875 PRIDE:Q20875
EnsemblMetazoa:F56D2.6a.1 EnsemblMetazoa:F56D2.6a.2 GeneID:175771
KEGG:cel:CELE_F56D2.6 UCSC:F56D2.6a CTD:175771 WormBase:F56D2.6a
GeneTree:ENSGT00650000093246 InParanoid:Q20875 OMA:TVLQIHA
NextBio:889592 ArrayExpress:Q20875 Uniprot:Q20875
Length = 739
Score = 292 (107.8 bits), Expect = 1.1e-45, Sum P(3) = 1.1e-45
Identities = 70/186 (37%), Positives = 108/186 (58%)
Query: 348 RTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYYSNDPVVNYVQGVVD 407
R +K++I SAT+DA + +++ + +LSV G +PV ++++ + +Y++ +
Sbjct: 227 RADIKVVIMSATLDAGKFQRYFE-----DCPLLSVPGRTFPVEIFFTPNAEKDYLEAAIR 281
Query: 408 TAIKIHESMPV-GDILAFVIGLEQIEHIIG-ILKQYHNQREDLKLL-ILPMHGSLPNNEQ 464
T I+IH V GDIL F+ G E+IE I ++ D L +P++ +LP Q
Sbjct: 282 TVIQIHMVEEVEGDILLFLTGQEEIEEACKRIDREIQALGADAGALSCIPLYSTLPPAAQ 341
Query: 465 IKVFRPTP------RAMRKIVIATNIAETSITIPGIVYVIDPGFVKARWFNPNTLTNSLV 518
++F P P RK VI+TNIAETS+TI G+V+VIDPGF K + +NP SL+
Sbjct: 342 QRIFEPAPPNRPNGAISRKCVISTNIAETSLTIDGVVFVIDPGFSKQKVYNPRIRVESLL 401
Query: 519 VVPISK 524
V PISK
Sbjct: 402 VCPISK 407
Score = 289 (106.8 bits), Expect = 8.2e-22, P = 8.2e-22
Identities = 53/99 (53%), Positives = 77/99 (77%)
Query: 599 KLIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTKIKYMTEGILMRE 658
+L+ T+PRR++ S+A RV+EE+ LG VGY+IRF+DC +E T +KY T+G+L+RE
Sbjct: 130 RLVACTQPRRVAAMSVATRVAEEMDVVLGQEVGYSIRFEDCISER-TVLKYCTDGMLLRE 188
Query: 659 MMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKILKDK 697
M PLL KY V++LDE HERT+ TDILMGL+K+I++++
Sbjct: 189 AMNSPLLDKYKVLILDEAHERTLATDILMGLIKEIVRNR 227
Score = 217 (81.4 bits), Expect = 1.1e-45, Sum P(3) = 1.1e-45
Identities = 66/234 (28%), Positives = 115/234 (49%)
Query: 620 EELRTTLGHTVGYTIRFDDCTTEDVTKIKYMTEGILMREMMTDPLLRKYSVIMLD-EVHE 678
E LR+ LG V ++ TED+ +M M LL I D E+ E
Sbjct: 445 EILRSNLGSVV---LQLKKLGTEDLVHFDFMDPPAPETLMRALELLNYLQAINDDGELTE 501
Query: 679 R-TIFTDILMG--LLKKILKDKERDFECSDEIASILSLLQVQDIFIKPSSGALSLKARVL 735
++ + + L K ++ E CS+EI SI ++L V +++P+ + +A
Sbjct: 502 LGSLMAEFPLDPQLAKMLITSTE--LNCSNEILSITAMLSVPQCWVRPNE--MRTEADEA 557
Query: 736 RRNFEVEQGDLLTLLNIFKFYEKQENKKQFCHKYFFNYKVLKRAAELKNQMILLLKKSSI 795
+ F GD LTLLN++ +++ + Q+C+ F NY+ +K A ++ Q+ ++ K ++
Sbjct: 558 KARFAHIDGDHLTLLNVYHSFKQNQEDPQWCYDNFINYRTMKTADTVRTQLSRVMDKYNL 617
Query: 796 PLVTSPRNTNA----VLKCLTNGFFSNAAYLHYSGVYRTVRGNEDLYIHPSSVL 845
V++ + + K L GFF A+L SG Y TV+ N+ + +HPS+VL
Sbjct: 618 RRVSTDFKSRDYYLNIRKALVAGFFMQVAHLERSGHYVTVKDNQLVNLHPSTVL 671
Score = 201 (75.8 bits), Expect = 1.2e-17, Sum P(3) = 1.2e-17
Identities = 50/111 (45%), Positives = 72/111 (64%)
Query: 43 KFSRLYTEASF-SQLNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRVA 101
K RLYTE ++ S++ + T PE+ R+ L S VLQLK LG +++ F F PP + L A
Sbjct: 424 KCFRLYTETAYGSEMQDQTYPEILRSNLGSVVLQLKKLGTEDLVHFDFMDPPAPETLMRA 483
Query: 102 LELLYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLLSSGSVLDSAVEIL 152
LELL L A++ +G LT+ +G MAE PL P AK+L++S + L+ + EIL
Sbjct: 484 LELLNYLQAINDDGELTE-LGSLMAEFPLDPQLAKMLITS-TELNCSNEIL 532
Score = 102 (41.0 bits), Expect = 1.1e-45, Sum P(3) = 1.1e-45
Identities = 19/45 (42%), Positives = 31/45 (68%)
Query: 2 TEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILMECSRKFSR 46
T+G+L+ + P ++KY V++LD+ HERT+ TDILM ++ R
Sbjct: 181 TDGMLLREAMNSPLLDKYKVLILDEAHERTLATDILMGLIKEIVR 225
Score = 44 (20.5 bits), Expect = 1.1e-27, Sum P(3) = 1.1e-27
Identities = 12/41 (29%), Positives = 20/41 (48%)
Query: 581 VFFSFFQYLLEAGWCYDTKLIGITEPRRISVTSLANRVSEE 621
V+ SF Q + WCYD + T +V + +RV ++
Sbjct: 574 VYHSFKQNQEDPQWCYDNFINYRTMKTADTVRTQLSRVMDK 614
Score = 41 (19.5 bits), Expect = 4.1e-13, Sum P(2) = 4.1e-13
Identities = 6/20 (30%), Positives = 15/20 (75%)
Query: 434 IIGILKQYHNQREDLKLLIL 453
++G++K+ R D+K++I+
Sbjct: 216 LMGLIKEIVRNRADIKVVIM 235
>UNIPROTKB|Q20875 [details] [associations]
symbol:F56D2.6 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase F56D2.6" species:6239 "Caenorhabditis
elegans" [GO:0030686 "90S preribosome" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0005739
"mitochondrion" evidence=ISS] [GO:0006364 "rRNA processing"
evidence=ISS] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 GO:GO:0005739 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0002009 GO:GO:0006898
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 GO:GO:0016246
GO:GO:0008380 GO:GO:0006397 GO:GO:0040011 GO:GO:0003676
GO:GO:0042127 GO:GO:0040035 GO:GO:0007281 GO:GO:0040020
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0030686
GO:GO:0006364 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 GO:GO:0040022 HOGENOM:HOG000175261 EMBL:FO080358
KO:K12820 PIR:T16482 RefSeq:NP_741147.1 ProteinModelPortal:Q20875
SMR:Q20875 STRING:Q20875 PaxDb:Q20875 PRIDE:Q20875
EnsemblMetazoa:F56D2.6a.1 EnsemblMetazoa:F56D2.6a.2 GeneID:175771
KEGG:cel:CELE_F56D2.6 UCSC:F56D2.6a CTD:175771 WormBase:F56D2.6a
GeneTree:ENSGT00650000093246 InParanoid:Q20875 OMA:TVLQIHA
NextBio:889592 ArrayExpress:Q20875 Uniprot:Q20875
Length = 739
Score = 292 (107.8 bits), Expect = 1.1e-45, Sum P(3) = 1.1e-45
Identities = 70/186 (37%), Positives = 108/186 (58%)
Query: 348 RTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYYSNDPVVNYVQGVVD 407
R +K++I SAT+DA + +++ + +LSV G +PV ++++ + +Y++ +
Sbjct: 227 RADIKVVIMSATLDAGKFQRYFE-----DCPLLSVPGRTFPVEIFFTPNAEKDYLEAAIR 281
Query: 408 TAIKIHESMPV-GDILAFVIGLEQIEHIIG-ILKQYHNQREDLKLL-ILPMHGSLPNNEQ 464
T I+IH V GDIL F+ G E+IE I ++ D L +P++ +LP Q
Sbjct: 282 TVIQIHMVEEVEGDILLFLTGQEEIEEACKRIDREIQALGADAGALSCIPLYSTLPPAAQ 341
Query: 465 IKVFRPTP------RAMRKIVIATNIAETSITIPGIVYVIDPGFVKARWFNPNTLTNSLV 518
++F P P RK VI+TNIAETS+TI G+V+VIDPGF K + +NP SL+
Sbjct: 342 QRIFEPAPPNRPNGAISRKCVISTNIAETSLTIDGVVFVIDPGFSKQKVYNPRIRVESLL 401
Query: 519 VVPISK 524
V PISK
Sbjct: 402 VCPISK 407
Score = 289 (106.8 bits), Expect = 8.2e-22, P = 8.2e-22
Identities = 53/99 (53%), Positives = 77/99 (77%)
Query: 599 KLIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTKIKYMTEGILMRE 658
+L+ T+PRR++ S+A RV+EE+ LG VGY+IRF+DC +E T +KY T+G+L+RE
Sbjct: 130 RLVACTQPRRVAAMSVATRVAEEMDVVLGQEVGYSIRFEDCISER-TVLKYCTDGMLLRE 188
Query: 659 MMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKILKDK 697
M PLL KY V++LDE HERT+ TDILMGL+K+I++++
Sbjct: 189 AMNSPLLDKYKVLILDEAHERTLATDILMGLIKEIVRNR 227
Score = 217 (81.4 bits), Expect = 1.1e-45, Sum P(3) = 1.1e-45
Identities = 66/234 (28%), Positives = 115/234 (49%)
Query: 620 EELRTTLGHTVGYTIRFDDCTTEDVTKIKYMTEGILMREMMTDPLLRKYSVIMLD-EVHE 678
E LR+ LG V ++ TED+ +M M LL I D E+ E
Sbjct: 445 EILRSNLGSVV---LQLKKLGTEDLVHFDFMDPPAPETLMRALELLNYLQAINDDGELTE 501
Query: 679 R-TIFTDILMG--LLKKILKDKERDFECSDEIASILSLLQVQDIFIKPSSGALSLKARVL 735
++ + + L K ++ E CS+EI SI ++L V +++P+ + +A
Sbjct: 502 LGSLMAEFPLDPQLAKMLITSTE--LNCSNEILSITAMLSVPQCWVRPNE--MRTEADEA 557
Query: 736 RRNFEVEQGDLLTLLNIFKFYEKQENKKQFCHKYFFNYKVLKRAAELKNQMILLLKKSSI 795
+ F GD LTLLN++ +++ + Q+C+ F NY+ +K A ++ Q+ ++ K ++
Sbjct: 558 KARFAHIDGDHLTLLNVYHSFKQNQEDPQWCYDNFINYRTMKTADTVRTQLSRVMDKYNL 617
Query: 796 PLVTSPRNTNA----VLKCLTNGFFSNAAYLHYSGVYRTVRGNEDLYIHPSSVL 845
V++ + + K L GFF A+L SG Y TV+ N+ + +HPS+VL
Sbjct: 618 RRVSTDFKSRDYYLNIRKALVAGFFMQVAHLERSGHYVTVKDNQLVNLHPSTVL 671
Score = 201 (75.8 bits), Expect = 1.2e-17, Sum P(3) = 1.2e-17
Identities = 50/111 (45%), Positives = 72/111 (64%)
Query: 43 KFSRLYTEASF-SQLNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRVA 101
K RLYTE ++ S++ + T PE+ R+ L S VLQLK LG +++ F F PP + L A
Sbjct: 424 KCFRLYTETAYGSEMQDQTYPEILRSNLGSVVLQLKKLGTEDLVHFDFMDPPAPETLMRA 483
Query: 102 LELLYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLLSSGSVLDSAVEIL 152
LELL L A++ +G LT+ +G MAE PL P AK+L++S + L+ + EIL
Sbjct: 484 LELLNYLQAINDDGELTE-LGSLMAEFPLDPQLAKMLITS-TELNCSNEIL 532
Score = 102 (41.0 bits), Expect = 1.1e-45, Sum P(3) = 1.1e-45
Identities = 19/45 (42%), Positives = 31/45 (68%)
Query: 2 TEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILMECSRKFSR 46
T+G+L+ + P ++KY V++LD+ HERT+ TDILM ++ R
Sbjct: 181 TDGMLLREAMNSPLLDKYKVLILDEAHERTLATDILMGLIKEIVR 225
Score = 44 (20.5 bits), Expect = 1.1e-27, Sum P(3) = 1.1e-27
Identities = 12/41 (29%), Positives = 20/41 (48%)
Query: 581 VFFSFFQYLLEAGWCYDTKLIGITEPRRISVTSLANRVSEE 621
V+ SF Q + WCYD + T +V + +RV ++
Sbjct: 574 VYHSFKQNQEDPQWCYDNFINYRTMKTADTVRTQLSRVMDK 614
Score = 41 (19.5 bits), Expect = 4.1e-13, Sum P(2) = 4.1e-13
Identities = 6/20 (30%), Positives = 15/20 (75%)
Query: 434 IIGILKQYHNQREDLKLLIL 453
++G++K+ R D+K++I+
Sbjct: 216 LMGLIKEIVRNRADIKVVIM 235
>ASPGD|ASPL0000070923 [details] [associations]
symbol:AN4721 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003029 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00575
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003723
EMBL:BN001303 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 EMBL:AACD01000080 GO:GO:0008026
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316 KO:K12818
OMA:NAWCYEN OrthoDB:EOG45TGW9 RefSeq:XP_662325.1
ProteinModelPortal:Q5B409 EnsemblFungi:CADANIAT00005708
GeneID:2872518 KEGG:ani:AN4721.2 Uniprot:Q5B409
Length = 1241
Score = 357 (130.7 bits), Expect = 3.1e-45, Sum P(2) = 3.1e-45
Identities = 96/272 (35%), Positives = 146/272 (53%)
Query: 257 VACSCTVVEFLTEMGCRMDFEYISRGYMFRKGRMKILVSKIFKMSQGK-PSDSGVEPISQ 315
VA E+GC++ E GY R +KI M+ G + ++P +
Sbjct: 633 VAAMSVAKRVAEEVGCKLGAEV---GYTIRFEDCTSPETKIKYMTDGMLQREVLLDPDLK 689
Query: 316 SYLVELSILAPGGQDVIGEDMKAFAEQLKPLKRT-QLKLIISSATVDAEEICQFYNISAS 374
Y V + L + I D+ F LKR L+LI++SAT+DA++ +++
Sbjct: 690 KYSVIM--LDEAHERTIATDV-LFGLLKTTLKRRPDLRLIVTSATLDADKFSEYFY---- 742
Query: 375 SNATILSVKGHLYPVSVYYSNDPVVNYVQGVVDTAIKIHESMPVGDILAFVIGLEQIEHI 434
I S+ G +PV + YS +P +Y+ + T ++IH + P GD+L F+ G E+I+
Sbjct: 743 -GCPIFSIPGRTFPVEIMYSKEPESDYLDAALITVMQIHLTEPPGDMLLFLTGQEEIDTA 801
Query: 435 IGILKQYHNQREDL--KLLILPMHGSLPNNEQIKVFRPTPRAMRKIVIATNIAETSITIP 492
IL + +L+ILP++ +LP+ Q ++F P P RK+VIATNIAETSITI
Sbjct: 802 CEILYERMKALGPSVPELVILPVYSALPSEMQSRIFDPAPPGGRKVVIATNIAETSITID 861
Query: 493 GIVYVIDPGFVKARWFNPNTLTNSLVVVPISK 524
I YVIDPGFVK + ++P +SLVV PIS+
Sbjct: 862 NIYYVIDPGFVKQKAYDPKLGMDSLVVTPISQ 893
Score = 342 (125.4 bits), Expect = 1.4e-43, Sum P(2) = 1.4e-43
Identities = 68/109 (62%), Positives = 85/109 (77%)
Query: 587 QYLLEAGWCYDTKLIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTK 646
QYL EAGW + +IG T+PRR++ S+A RV+EE+ LG VGYTIRF+DCT+ + TK
Sbjct: 612 QYLAEAGWA-NKGIIGCTQPRRVAAMSVAKRVAEEVGCKLGAEVGYTIRFEDCTSPE-TK 669
Query: 647 IKYMTEGILMREMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKILK 695
IKYMT+G+L RE++ DP L+KYSVIMLDE HERTI TD+L GLLK LK
Sbjct: 670 IKYMTDGMLQREVLLDPDLKKYSVIMLDEAHERTIATDVLFGLLKTTLK 718
Score = 221 (82.9 bits), Expect = 1.6e-36, Sum P(3) = 1.6e-36
Identities = 47/100 (47%), Positives = 67/100 (67%)
Query: 43 KFSRLYTEASF-SQLNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRVA 101
K RLYTEA++ S++ T P++QR LS +L LKA+GI+++L F F PPP + A
Sbjct: 910 KCFRLYTEAAYQSEMLPTTIPDIQRQNLSHTILMLKAMGINDLLHFDFMDPPPTNTMLTA 969
Query: 102 LELLYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLLSS 141
LE LY+L A+D G LT+ +G MA+ P+ P AKVL++S
Sbjct: 970 LEELYALSALDDEGLLTR-LGRKMADFPMEPALAKVLIAS 1008
Score = 209 (78.6 bits), Expect = 3.1e-45, Sum P(2) = 3.1e-45
Identities = 42/147 (28%), Positives = 82/147 (55%)
Query: 700 DFECSDEIASILSLLQVQDIFIKPSSGALSLKARVLRRNFEVEQGDLLTLLNIFKFYEKQ 759
D CS+E+ SI+++L +Q +F +P +A + F GD LTLLN++ +++
Sbjct: 1010 DMGCSEEMLSIVAMLSIQSVFYRPKEK--QQQADQKKAKFHDPHGDHLTLLNVYNAWKRS 1067
Query: 760 ENKKQFCHKYFFNYKVLKRAAELKNQMILLLKKSSIPLVTSPRNTNAVLKCLTNGFFSNA 819
+C++ F + ++RA +++ Q++ ++++ +V+ RNT V + L GFF N+
Sbjct: 1068 GFSNAWCYENFIQARQIRRAQDVRQQLLGIMQRYHHKIVSCGRNTTKVRQALCTGFFRNS 1127
Query: 820 AYLHYSGVYRTVRGNEDLYIHPSSVLY 846
A Y+T+ +Y+HPSS ++
Sbjct: 1128 ARKDPQEGYKTLVEGTPVYMHPSSAMF 1154
Score = 108 (43.1 bits), Expect = 1.6e-36, Sum P(3) = 1.6e-36
Identities = 22/37 (59%), Positives = 28/37 (75%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDIL 37
MT+G+L DP ++KYSVIMLD+ HERTI TD+L
Sbjct: 673 MTDGMLQREVLLDPDLKKYSVIMLDEAHERTIATDVL 709
Score = 53 (23.7 bits), Expect = 3.6e-12, Sum P(3) = 3.6e-12
Identities = 14/64 (21%), Positives = 32/64 (50%)
Query: 46 RLYTEASFS-QLNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRVALEL 104
+L E ++ + +CT PE + ++ +LQ + L ++ ++S A +A ++
Sbjct: 649 KLGAEVGYTIRFEDCTSPETKIKYMTDGMLQREVLLDPDLKKYSVIMLDEAHERTIATDV 708
Query: 105 LYSL 108
L+ L
Sbjct: 709 LFGL 712
Score = 40 (19.1 bits), Expect = 8.9e-18, Sum P(3) = 8.9e-18
Identities = 9/27 (33%), Positives = 16/27 (59%)
Query: 137 VLLSSGSVLDSAVEILLHRLRGLCDNV 163
+ L+ +D+A EIL R++ L +V
Sbjct: 790 LFLTGQEEIDTACEILYERMKALGPSV 816
Score = 37 (18.1 bits), Expect = 9.3e-19, Sum P(3) = 9.3e-19
Identities = 4/13 (30%), Positives = 12/13 (92%)
Query: 432 EHIIGILKQYHNQ 444
+ ++GI+++YH++
Sbjct: 1092 QQLLGIMQRYHHK 1104
>TAIR|locus:2095989 [details] [associations]
symbol:AT3G62310 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003724 "RNA
helicase activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0009560 "embryo sac egg
cell differentiation" evidence=RCA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005829 GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0005730 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 EMBL:AL162507 KO:K12820
ProtClustDB:CLSN2683587 OMA:TVLQIHA EMBL:AY120782 EMBL:BT010331
IPI:IPI00540868 PIR:T48023 RefSeq:NP_191790.1 UniGene:At.34140
UniGene:At.4777 ProteinModelPortal:Q9LZQ9 SMR:Q9LZQ9 IntAct:Q9LZQ9
PaxDb:Q9LZQ9 PRIDE:Q9LZQ9 EnsemblPlants:AT3G62310.1 GeneID:825404
KEGG:ath:AT3G62310 TAIR:At3g62310 InParanoid:Q9LZQ9
PhylomeDB:Q9LZQ9 ArrayExpress:Q9LZQ9 Genevestigator:Q9LZQ9
Uniprot:Q9LZQ9
Length = 726
Score = 352 (129.0 bits), Expect = 3.9e-45, Sum P(2) = 3.9e-45
Identities = 85/224 (37%), Positives = 131/224 (58%)
Query: 311 EPISQSYLVELSILAPGGQDVIGEDMKAFAEQLKPLK-RTQLKLIISSATVDAEEICQFY 369
+P+ + Y V IL + + D+ F + LK R LKL++ SAT++AE+ ++
Sbjct: 175 DPLLERYKV--IILDEAHERTLATDV-LFGLLKEVLKNRPDLKLVVMSATLEAEKFQDYF 231
Query: 370 NISASSNATILSVKGHLYPVSVYYSNDPVVNYVQGVVDTAIKIHESMPVGDILAFVIGLE 429
S A ++ V G L+PV ++Y+ +P +Y++ + T ++IH P GDIL F+ G E
Sbjct: 232 -----SGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPPGDILVFLTGEE 286
Query: 430 QIEHIIG-ILKQYHNQREDL-KLLILPMHGSLPNNEQIKVFRPTPRAM-------RKIVI 480
+IE I K+ N + + + ++P++ +LP Q K+F P P + RKIV+
Sbjct: 287 EIEDACRKINKEVGNLGDQVGPIKVVPLYSTLPPAMQQKIFDPAPEPVTEGGPPGRKIVV 346
Query: 481 ATNIAETSITIPGIVYVIDPGFVKARWFNPNTLTNSLVVVPISK 524
+TNIAETS+TI GIVYVIDPGF K + +NP SL+V PISK
Sbjct: 347 STNIAETSLTIDGIVYVIDPGFAKQKVYNPRIRVESLLVSPISK 390
Score = 302 (111.4 bits), Expect = 3.0e-23, P = 3.0e-23
Identities = 62/132 (46%), Positives = 94/132 (71%)
Query: 600 LIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTKIKYMTEGILMREM 659
L+G T+PRR++ S++ RV+EE+ T+G VGY+IRF+DC++ T +KY+T+G+L+RE
Sbjct: 114 LVGCTQPRRVAAMSVSRRVAEEMDVTIGEEVGYSIRFEDCSSPR-TVLKYLTDGMLLREA 172
Query: 660 MTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKILKDKERDFECSDEIASILSLLQVQDI 719
M DPLL +Y VI+LDE HERT+ TD+L GLLK++LK++ D + +++ L + QD
Sbjct: 173 MADPLLERYKVIILDEAHERTLATDVLFGLLKEVLKNRP-DLKLV-VMSATLEAEKFQDY 230
Query: 720 FIKPSSGALSLK 731
F SGA +K
Sbjct: 231 F----SGAPLMK 238
Score = 211 (79.3 bits), Expect = 1.7e-29, Sum P(2) = 1.7e-29
Identities = 50/100 (50%), Positives = 65/100 (65%)
Query: 43 KFSRLYTEASFSQ-LNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRVA 101
K RLYTE SF+ L T PE+ R+ L++ VL LK LGI +++ F F PP + L A
Sbjct: 407 KCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRA 466
Query: 102 LELLYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLLSS 141
LE+L LGA+D +GNLTK GE M+E PL P AK+L+ S
Sbjct: 467 LEVLNYLGALDDDGNLTK-TGEIMSEFPLDPQMAKMLIVS 505
Score = 204 (76.9 bits), Expect = 3.9e-45, Sum P(2) = 3.9e-45
Identities = 41/150 (27%), Positives = 85/150 (56%)
Query: 700 DFECSDEIASILSLLQVQDIFIKPSSGALSLKARVLRRNFEVEQGDLLTLLNIFKFYEKQ 759
+F CS+EI S+ ++L V + FI+P + A + F +GD LTLLN++ +++
Sbjct: 507 EFNCSNEILSVSAMLSVPNCFIRPREAQKA--ADEAKARFGHIEGDHLTLLNVYHAFKQN 564
Query: 760 ENKKQFCHKYFFNYKVLKRAAELKNQMILLLKKSSIPLVTSPRNTNA----VLKCLTNGF 815
+C++ F N + +K A ++ Q++ ++ + ++ + ++ N+ + K + G+
Sbjct: 565 NEDPNWCYENFINNRAMKSADNVRQQLVRIMSRFNLKMCSTDFNSRDYYINIRKAMLAGY 624
Query: 816 FSNAAYLHYSGVYRTVRGNEDLYIHPSSVL 845
F A+L +G Y TV+ N+ +++HPS+ L
Sbjct: 625 FMQVAHLERTGHYLTVKDNQVVHLHPSNCL 654
Score = 111 (44.1 bits), Expect = 5.3e-19, Sum P(2) = 5.3e-19
Identities = 36/139 (25%), Positives = 64/139 (46%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILMECSRKFSRLYTEASFSQLNECT 60
+T+G+L+ DP +E+Y VI+LD+ HERT+ TD+L ++ + + ++
Sbjct: 163 LTDGMLLREAMADPLLERYKVIILDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATL 222
Query: 61 PPEMQRTELSSAVLQLKALG-IHNILRFSFPSPPPAQNLRVALELLYSLGAMDVNGN-LT 118
E + S A L +K G +H + F + P L A+ + + + G+ L
Sbjct: 223 EAEKFQDYFSGAPL-MKVPGRLHPVEIF-YTQEPERDYLEAAIRTVVQIHMCEPPGDILV 280
Query: 119 KPVGETMAEMPLHPIHAKV 137
GE E I+ +V
Sbjct: 281 FLTGEEEIEDACRKINKEV 299
Score = 37 (18.1 bits), Expect = 1.3e-27, Sum P(2) = 1.3e-27
Identities = 6/17 (35%), Positives = 10/17 (58%)
Query: 581 VFFSFFQYLLEAGWCYD 597
V+ +F Q + WCY+
Sbjct: 557 VYHAFKQNNEDPNWCYE 573
>POMBASE|SPAC2G11.11c [details] [associations]
symbol:prh1 "ATP-dependent RNA helicase Prh1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=ISM]
[GO:0005730 "nucleolus" evidence=ISO;IDA] [GO:0042254 "ribosome
biogenesis" evidence=ISO] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
PomBase:SPAC2G11.11c GO:GO:0005524 EMBL:CU329670 GO:GO:0005730
GenomeReviews:CU329670_GR GO:GO:0006397 GO:GO:0042254 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 HOGENOM:HOG000175261
KO:K14781 OrthoDB:EOG4F7RTB EMBL:D13249 PIR:S35546 PIR:S62466
RefSeq:NP_593091.1 ProteinModelPortal:Q03319
EnsemblFungi:SPAC2G11.11c.1 GeneID:2541750 KEGG:spo:SPAC2G11.11c
OMA:MANDTTI NextBio:20802841 Uniprot:Q03319
Length = 719
Score = 339 (124.4 bits), Expect = 9.8e-45, Sum P(2) = 9.8e-45
Identities = 91/280 (32%), Positives = 140/280 (50%)
Query: 269 EMGCRMDFEYISRGYMFRKGRMKILVSKIFKMSQGKPSDSGV-EPISQSYLVELSILAPG 327
E GCR+ E + GY R ++I ++ G + +PI Y IL
Sbjct: 164 EQGCRLG-EQV--GYSIRFDDTTSKKTRIKYLTDGMLLRELINDPILSQY--HTLILDEA 218
Query: 328 GQDVIGEDMK-AFAEQLKPLKRTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHL 386
+ + DM F +++ KR L++II SAT++AE +F++ A I + G
Sbjct: 219 HERTLMTDMLLGFVKKIIK-KRPALRVIIMSATLNAERFSEFFD-----GAEICYISGRQ 272
Query: 387 YPVSVYYSNDPVVNYVQGVVDTAIKIHESMPVGDILAFVIGLEQIEHIIGILKQYHNQR- 445
YPV ++Y+ P +Y+ + T ++H +P GDIL F+ G ++IE + ++K Y Q
Sbjct: 273 YPVQIHYTYTPEPDYLDACLRTIFQLHTKLPPGDILVFLTGQDEIEALEALIKSYSKQLP 332
Query: 446 EDL-KLLILPMHGSLPNNEQIKVFRPTPRAMRKIVIATNIAETSITIPGIVYVIDPGFVK 504
+L ++ P+ SLP +Q++VF P RK+V++TNIAETS+TI GI YVID G K
Sbjct: 333 SNLPQIQACPLFASLPQEQQLQVFLPALANHRKVVLSTNIAETSVTISGIRYVIDTGLAK 392
Query: 505 ARWFNPNTLTNSLVVVPISKXXXXXXXXXXXXXXXXHVYR 544
+ FN SL V PIS+ YR
Sbjct: 393 IKQFNSKLGLESLTVQPISQSAAMQRSGRAGREAAGQCYR 432
Score = 280 (103.6 bits), Expect = 7.4e-21, P = 7.4e-21
Identities = 53/111 (47%), Positives = 80/111 (72%)
Query: 587 QYLLEAGWCYDTKLIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTK 646
Q+L E + + + IT+PRR++ +LA RV+ E LG VGY+IRFDD TT T+
Sbjct: 131 QFLNECPYAQEG-CVAITQPRRVAAVNLAKRVAAEQGCRLGEQVGYSIRFDD-TTSKKTR 188
Query: 647 IKYMTEGILMREMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKILKDK 697
IKY+T+G+L+RE++ DP+L +Y ++LDE HERT+ TD+L+G +KKI+K +
Sbjct: 189 IKYLTDGMLLRELINDPILSQYHTLILDEAHERTLMTDMLLGFVKKIIKKR 239
Score = 214 (80.4 bits), Expect = 9.8e-45, Sum P(2) = 9.8e-45
Identities = 63/212 (29%), Positives = 104/212 (49%)
Query: 643 DVTKIKYMTEGILMREMMTDPLLRKYSVIMLDEV-HERTI-FTDILMGLLKKILKD--KE 698
DV YM +E + L YS+ LD+ H + + L+ LL + +
Sbjct: 469 DVINFHYMDPP--SKEGLLRALEHLYSIGALDDNGHINDLGYQMSLIPLLPSLARAVLAA 526
Query: 699 RDFECSDEIASILSLLQVQDIFIKPSSGA-LSLKARVLRRNFEVEQGDLLTLLNIFKFY- 756
R+ C E+ ++S L +F+ P +++AR+ F +GDLLT LN + Y
Sbjct: 527 REHNCLSEVIDVVSCLSTDSMFLFPQEKRDEAIEARL---KFLHSEGDLLTCLNALRQYL 583
Query: 757 -EKQENKKQFCHKYFFNYKVLKRAAELKNQMILLLKKSSIPLVTSPR-NTNAVLKCLTNG 814
+++KQ+C + F N + LK +++ Q+ K L +SP N+ +L +G
Sbjct: 584 ESSHDSRKQWCSQNFINRRALKTILDIRKQLREHCLKDGWELNSSPEVNSENLLLSFLSG 643
Query: 815 FFSNAAYLHYSGVYRTVRGNEDLYIHPSSVLY 846
+ +N A LH G YRT+ GN+ + IHPSS L+
Sbjct: 644 YITNTALLHPDGSYRTIIGNQTISIHPSSSLF 675
Score = 194 (73.4 bits), Expect = 4.7e-16, Sum P(2) = 4.7e-16
Identities = 43/103 (41%), Positives = 68/103 (66%)
Query: 39 ECSRKFSRLYTEASFSQLNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNL 98
E + + R+YTEA F +L + T PE++R +LS AVL LKA G ++++ F + PP + L
Sbjct: 425 EAAGQCYRIYTEADFDKLPKETIPEIKRIDLSQAVLTLKARGQNDVINFHYMDPPSKEGL 484
Query: 99 RVALELLYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLLSS 141
ALE LYS+GA+D NG++ +G M+ +PL P A+ +L++
Sbjct: 485 LRALEHLYSIGALDDNGHIND-LGYQMSLIPLLPSLARAVLAA 526
Score = 93 (37.8 bits), Expect = 3.1e-18, Sum P(2) = 3.1e-18
Identities = 16/43 (37%), Positives = 30/43 (69%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILMECSRK 43
+T+G+L+ +DP + +Y ++LD+ HERT+ TD+L+ +K
Sbjct: 192 LTDGMLLRELINDPILSQYHTLILDEAHERTLMTDMLLGFVKK 234
>TAIR|locus:2065210 [details] [associations]
symbol:AT2G47250 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0009941 "chloroplast envelope" evidence=IDA]
[GO:0016020 "membrane" evidence=IDA] [GO:0005829 "cytosol"
evidence=RCA] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0016020 GO:GO:0008380
GO:GO:0006397 GO:GO:0009941 GO:GO:0003676 EMBL:AC002337
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
EMBL:AY128301 EMBL:BT004534 IPI:IPI00540033 PIR:H84912
RefSeq:NP_182247.1 UniGene:At.36388 ProteinModelPortal:O22899
SMR:O22899 PaxDb:O22899 PRIDE:O22899 EnsemblPlants:AT2G47250.1
GeneID:819338 KEGG:ath:AT2G47250 GeneFarm:1798 TAIR:At2g47250
InParanoid:O22899 KO:K12820 OMA:XEIDEAC PhylomeDB:O22899
ProtClustDB:CLSN2683587 Genevestigator:O22899 GermOnline:AT2G47250
Uniprot:O22899
Length = 729
Score = 350 (128.3 bits), Expect = 1.4e-44, Sum P(2) = 1.4e-44
Identities = 85/224 (37%), Positives = 132/224 (58%)
Query: 311 EPISQSYLVELSILAPGGQDVIGEDMKAFAEQLKPLK-RTQLKLIISSATVDAEEICQFY 369
+P+ + Y V IL + + D+ F + L+ R LKL++ SAT++AE+ +++
Sbjct: 179 DPLLERYKV--IILDEAHERTLATDV-LFGLLKEVLRNRPDLKLVVMSATLEAEKFQEYF 235
Query: 370 NISASSNATILSVKGHLYPVSVYYSNDPVVNYVQGVVDTAIKIHESMPVGDILAFVIGLE 429
S A ++ V G L+PV ++Y+ +P +Y++ + T ++IH P GDIL F+ G E
Sbjct: 236 -----SGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPPGDILVFLTGEE 290
Query: 430 QIEHIIG-ILKQYHNQREDL-KLLILPMHGSLPNNEQIKVFRPTP-------RAMRKIVI 480
+IE I K+ N + + + ++P++ +LP Q K+F P P A RKIV+
Sbjct: 291 EIEDACRKINKEVSNLGDQVGPVKVVPLYSTLPPAMQQKIFDPAPVPLTEGGPAGRKIVV 350
Query: 481 ATNIAETSITIPGIVYVIDPGFVKARWFNPNTLTNSLVVVPISK 524
+TNIAETS+TI GIVYVIDPGF K + +NP SL+V PISK
Sbjct: 351 STNIAETSLTIDGIVYVIDPGFAKQKVYNPRIRVESLLVSPISK 394
Score = 296 (109.3 bits), Expect = 1.6e-38, Sum P(2) = 1.6e-38
Identities = 51/98 (52%), Positives = 79/98 (80%)
Query: 600 LIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTKIKYMTEGILMREM 659
L+G T+PRR++ S++ RV++E+ ++G VGY+IRF+DCT+ T +KY+T+G+L+RE
Sbjct: 118 LVGCTQPRRVAAMSVSRRVADEMDVSIGEEVGYSIRFEDCTSSR-TMLKYLTDGMLLREA 176
Query: 660 MTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKILKDK 697
M DPLL +Y VI+LDE HERT+ TD+L GLLK++L+++
Sbjct: 177 MADPLLERYKVIILDEAHERTLATDVLFGLLKEVLRNR 214
Score = 207 (77.9 bits), Expect = 1.0e-28, Sum P(2) = 1.0e-28
Identities = 49/100 (49%), Positives = 64/100 (64%)
Query: 43 KFSRLYTEASFSQ-LNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRVA 101
K RLYTE SF+ L T PE+ R+ L++ VL LK LGI +++ F F PP + L A
Sbjct: 411 KCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRA 470
Query: 102 LELLYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLLSS 141
LE+L LGA+D GNLTK GE M+E PL P +K+L+ S
Sbjct: 471 LEVLNYLGALDDEGNLTK-TGEIMSEFPLDPQMSKMLIVS 509
Score = 201 (75.8 bits), Expect = 1.4e-44, Sum P(2) = 1.4e-44
Identities = 41/150 (27%), Positives = 83/150 (55%)
Query: 700 DFECSDEIASILSLLQVQDIFIKPSSGALSLKARVLRRNFEVEQGDLLTLLNIFKFYEKQ 759
+F CS+EI S+ ++L V + F++P + A + F GD LTLLN++ Y++
Sbjct: 511 EFNCSNEILSVSAMLSVPNCFVRPREAQKA--ADEAKARFGHIDGDHLTLLNVYHAYKQN 568
Query: 760 ENKKQFCHKYFFNYKVLKRAAELKNQMILLLKKSSIPLVTSPRNTNA----VLKCLTNGF 815
+C + F N + +K A ++ Q++ ++ + ++ + ++ N+ + K + G+
Sbjct: 569 NEDPNWCFENFVNNRAMKSADNVRQQLVRIMSRFNLKMCSTDFNSRDYYVNIRKAMLAGY 628
Query: 816 FSNAAYLHYSGVYRTVRGNEDLYIHPSSVL 845
F A+L +G Y TV+ N+ +++HPS+ L
Sbjct: 629 FMQVAHLERTGHYLTVKDNQVVHLHPSNCL 658
Score = 114 (45.2 bits), Expect = 5.6e-19, Sum P(2) = 5.6e-19
Identities = 37/139 (26%), Positives = 64/139 (46%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILMECSRKFSRLYTEASFSQLNECT 60
+T+G+L+ DP +E+Y VI+LD+ HERT+ TD+L ++ R + ++
Sbjct: 167 LTDGMLLREAMADPLLERYKVIILDEAHERTLATDVLFGLLKEVLRNRPDLKLVVMSATL 226
Query: 61 PPEMQRTELSSAVLQLKALG-IHNILRFSFPSPPPAQNLRVALELLYSLGAMDVNGN-LT 118
E + S A L +K G +H + F + P L A+ + + + G+ L
Sbjct: 227 EAEKFQEYFSGAPL-MKVPGRLHPVEIF-YTQEPERDYLEAAIRTVVQIHMCEPPGDILV 284
Query: 119 KPVGETMAEMPLHPIHAKV 137
GE E I+ +V
Sbjct: 285 FLTGEEEIEDACRKINKEV 303
>UNIPROTKB|F1S3A8 [details] [associations]
symbol:DHX38 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104877 EMBL:CU914723
Ensembl:ENSSSCT00000003045 OMA:IATIPEI Uniprot:F1S3A8
Length = 766
Score = 332 (121.9 bits), Expect = 1.7e-44, Sum P(3) = 1.7e-44
Identities = 68/179 (37%), Positives = 111/179 (62%)
Query: 347 KRTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYYSNDPVVNYVQGVV 406
+R+ LKLI++SAT+DAE+ F+ N I + G +PV + +S P +YV+ V
Sbjct: 213 RRSDLKLIVTSATMDAEKFASFFG-----NVPIFHIPGRTFPVDILFSKTPQEDYVEAAV 267
Query: 407 DTAIKIHESMPVGDILAFVIGLEQIEHIIGILKQYHNQREDLKLL-ILPMHGSLPNNEQI 465
++++H S GDIL F+ G E IE + ++ + E+ L +LP++ LP++ Q
Sbjct: 268 KQSLQVHLSGAPGDILIFMPGQEDIEVTSDQIVEHLEELENAPALAVLPIYSQLPSDLQA 327
Query: 466 KVFRPTPRAMRKIVIATNIAETSITIPGIVYVIDPGFVKARWFNPNTLTNSLVVVPISK 524
K+F+ P +RK ++ATNIAETS+T+ GI++VID G+ K + FNP ++L + PIS+
Sbjct: 328 KIFQKAPDGVRKCIVATNIAETSLTVDGIMFVIDSGYCKLKVFNPRIGMDALQIYPISQ 386
Score = 285 (105.4 bits), Expect = 1.3e-34, Sum P(2) = 1.3e-34
Identities = 57/108 (52%), Positives = 79/108 (73%)
Query: 587 QYLLEAGWCYDTKLIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTK 646
QYL E G+ D +IG T+PRR++ S+A RVSEE+ LG VGY IRF+DCT+E T
Sbjct: 106 QYLHEDGYT-DYGMIGCTQPRRVAAMSVAKRVSEEMGGNLGEEVGYAIRFEDCTSES-TL 163
Query: 647 IKYMTEGILMREMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKIL 694
IKYMT+GIL+RE + + L YS I++DE HER++ TD+L GLL++++
Sbjct: 164 IKYMTDGILLRESLREADLDHYSAIIMDEAHERSLNTDVLFGLLREVV 211
Score = 202 (76.2 bits), Expect = 6.2e-30, Sum P(3) = 6.2e-30
Identities = 47/109 (43%), Positives = 71/109 (65%)
Query: 46 RLYTEASF-SQLNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRVALEL 104
RLYT++++ ++L T PE+QRT L++ VL LK+LG+ ++L+F F PPP N+ ++
Sbjct: 406 RLYTQSAYKNELLTTTVPEIQRTNLANVVLLLKSLGVQDLLQFHFMDPPPEDNMLNSMYQ 465
Query: 105 LYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLLSSGSVLDSAVEILL 153
L+ LGA+D G LT G M E PL P +K+L+ S + S+ EILL
Sbjct: 466 LWILGALDNTGGLTS-TGRLMVEFPLDPALSKMLIVSCDMGCSS-EILL 512
Score = 176 (67.0 bits), Expect = 1.7e-44, Sum P(3) = 1.7e-44
Identities = 40/147 (27%), Positives = 75/147 (51%)
Query: 700 DFECSDEIASILSLLQVQDIFIKPSSGALSLKARVLRRNFEVEQGDLLTLLNIFKFYEKQ 759
D CS EI I+S+L V IF +P ++ +R F V + D LT LN++ ++
Sbjct: 503 DMGCSSEILLIVSMLSVPAIFYRPKGR--EEESDQIREKFAVPESDHLTYLNVYLQWKNN 560
Query: 760 ENKKQFCHKYFFNYKVLKRAAELKNQMILLLKKSSIPLVTSPRNTNAVLKCLTNGFFSNA 819
+C+ +F + K +++ E++ Q+ ++ + + L + + + V KC+ +F A
Sbjct: 561 NYSTIWCNDHFIHAKAMRKVREVRAQLKDIMVQQRMSLASCGTDWDIVRKCICAAYFHQA 620
Query: 820 AYLHYSGVYRTVRGNEDLYIHPSSVLY 846
A L G Y +R ++HP+S L+
Sbjct: 621 AKLKGIGEYVNIRTGMPCHLHPTSSLF 647
Score = 89 (36.4 bits), Expect = 1.7e-44, Sum P(3) = 1.7e-44
Identities = 16/43 (37%), Positives = 28/43 (65%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILMECSRK 43
MT+GIL+ + ++ YS I++D+ HER++ TD+L R+
Sbjct: 167 MTDGILLRESLREADLDHYSAIIMDEAHERSLNTDVLFGLLRE 209
Score = 42 (19.8 bits), Expect = 1.5e-30, Sum P(3) = 1.5e-30
Identities = 18/56 (32%), Positives = 25/56 (44%)
Query: 653 GILMREMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKIL-KDKERDFECSDEI 707
G LM E DP L K ++ D I + M + I + K R+ E SD+I
Sbjct: 482 GRLMVEFPLDPALSKMLIVSCDMGCSSEILLIVSMLSVPAIFYRPKGREEE-SDQI 536
Score = 42 (19.8 bits), Expect = 9.4e-09, Sum P(2) = 9.4e-09
Identities = 7/19 (36%), Positives = 14/19 (73%)
Query: 434 IIGILKQYHNQREDLKLLI 452
+ G+L++ +R DLKL++
Sbjct: 203 LFGLLREVVARRSDLKLIV 221
>ASPGD|ASPL0000052850 [details] [associations]
symbol:AN1363 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:BN001308 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 KO:K13117
EMBL:AACD01000018 OrthoDB:EOG4BGD47 RefSeq:XP_658967.1
EnsemblFungi:CADANIAT00001248 GeneID:2877144 KEGG:ani:AN1363.2
OMA:VAEEMRC Uniprot:Q5BDL7
Length = 670
Score = 344 (126.2 bits), Expect = 4.0e-44, Sum P(2) = 4.0e-44
Identities = 63/109 (57%), Positives = 90/109 (82%)
Query: 587 QYLLEAGWCYDTKLIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTK 646
QYL +AGWC + K I +T+PRR++ T++A RV+EE+R LG VGY+IRF+D T+ +T+
Sbjct: 57 QYLDQAGWCTEGKAIAVTQPRRVAATTVAARVAEEMRCKLGEDVGYSIRFEDRTSA-MTR 115
Query: 647 IKYMTEGILMREMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKILK 695
IK++T+G+L+RE + DPLL +YSVIM+DE HER++ TDIL+G+LKKILK
Sbjct: 116 IKFLTDGMLLREALVDPLLSRYSVIMVDEAHERSLSTDILLGILKKILK 164
Score = 330 (121.2 bits), Expect = 1.6e-42, Sum P(2) = 1.6e-42
Identities = 91/282 (32%), Positives = 144/282 (51%)
Query: 257 VACSCTVVEFLTEMGCRMDFEYISRGYMFRKGRMKILVSKIFKMSQGKP-SDSGVEPISQ 315
VA + EM C++ + GY R +++I ++ G ++ V+P+
Sbjct: 79 VAATTVAARVAEEMRCKLGEDV---GYSIRFEDRTSAMTRIKFLTDGMLLREALVDPLLS 135
Query: 316 SYLVELSILAPGGQDVIGEDMKAFAEQLKPLKRT-QLKLIISSATVDAEEICQFY----- 369
Y V + + + + D+ K LKR +L++I+SSAT+ AE+ +++
Sbjct: 136 RYSVIM--VDEAHERSLSTDI-LLGILKKILKRRPELRIIVSSATLQAEDFLRYFAGDES 192
Query: 370 ----NISASSNA-TILSVKGHLYPVSVYYSNDPVVNYVQGVVDTAIKIHESMPVGDILAF 424
N N I+S++G +YPV + NYV+ V T IH GDIL F
Sbjct: 193 QQGPNGEVGGNTGKIISIEGRMYPVDTLFLESAAENYVERSVKTVFDIHLQEGEGDILIF 252
Query: 425 VIGLEQIEHIIGILKQYHN--QREDLKLLILPMHGSLPNNEQIKVFRPTPRAMRKIVIAT 482
+ G E+IE I ++ + + LL LP++ L ++Q+ VF P P RK+V++T
Sbjct: 253 LTGREEIETAIQLISERATTLHPKSQSLLPLPLYAGLTTDQQMYVFEPAPENTRKVVVST 312
Query: 483 NIAETSITIPGIVYVIDPGFVKARWFNPNTLTNSLVVVPISK 524
NIAE S+TI GIVYV+D GF K R ++P+T +L VPISK
Sbjct: 313 NIAEASVTINGIVYVVDCGFAKLRAYDPSTGIETLTAVPISK 354
Score = 254 (94.5 bits), Expect = 7.1e-40, Sum P(3) = 7.1e-40
Identities = 54/101 (53%), Positives = 72/101 (71%)
Query: 43 KFSRLYTEASFSQLNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRVAL 102
K RLYT+ ++ QL + T PE+QR+ L+ ++QLKALGI NI+RF F + PPA + A
Sbjct: 371 KCFRLYTQHAYEQLPDATIPEIQRSNLAPVIMQLKALGIDNIVRFDFLTSPPADLVIRAF 430
Query: 103 ELLYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLLSSGS 143
ELLYSLGA+D LTKP+G MAE+ + P+ AKVLLS+ S
Sbjct: 431 ELLYSLGAIDDYAKLTKPLGMRMAELAVDPMMAKVLLSAQS 471
Score = 201 (75.8 bits), Expect = 4.0e-44, Sum P(2) = 4.0e-44
Identities = 50/170 (29%), Positives = 93/170 (54%)
Query: 689 LLKKILKDKERDFECSDEIASILSLLQVQD-IFIKPSSGALSLKARVLRRNFEVEQGDLL 747
++ K+L + F C EI +I +++ +Q ++++ S ++ RR F VE+GD L
Sbjct: 461 MMAKVLLSAQ-SFGCLSEILTIAAMVSLQGAVWVQHDGDKKSSESS--RRKFAVEEGDHL 517
Query: 748 TLLNIFK-FYEKQENKKQFCHKYFFNYKVLKRAAELKNQMILLLKKSSIPL-VTSPRNTN 805
T LN+++ F K + + ++C NY+ L RA ++ Q+ L++ I + T P + N
Sbjct: 518 TYLNVYQAFVTKGKKESKWCRDNLLNYRSLLRAVSVRAQLKRYLERFGIQVDETFPSHYN 577
Query: 806 A---------VLKCLTNGFFSNAAYLHYSGVYRTVRGNEDLYIHPSSVLY 846
+ +CLT G+F++AA + G ++TV G L+ HPSS+++
Sbjct: 578 KSDLSKPAEKIQRCLTTGYFAHAARMQPDGTFKTVSGGMTLHAHPSSLMF 627
Score = 101 (40.6 bits), Expect = 7.1e-40, Sum P(3) = 7.1e-40
Identities = 19/43 (44%), Positives = 31/43 (72%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILMECSRK 43
+T+G+L+ DP + +YSVIM+D+ HER++ TDIL+ +K
Sbjct: 119 LTDGMLLREALVDPLLSRYSVIMVDEAHERSLSTDILLGILKK 161
>UNIPROTKB|F1NWM3 [details] [associations]
symbol:DHX40 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 OMA:LYGSMPT EMBL:AADN02025787
IPI:IPI00583149 Ensembl:ENSGALT00000008234 Uniprot:F1NWM3
Length = 730
Score = 316 (116.3 bits), Expect = 3.5e-39, Sum P(2) = 3.5e-39
Identities = 64/134 (47%), Positives = 94/134 (70%)
Query: 587 QYLLEAGWCYDTKLIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTK 646
+YL EAG IG+T+PRR++ S+A RV+EE+ LG VGY +RFDDC++E+ T
Sbjct: 36 KYLYEAGLAQHGA-IGVTQPRRVATISVAQRVAEEMGCALGSVVGYQVRFDDCSSEE-TA 93
Query: 647 IKYMTEGILMREMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKI-LKDKERDFECSD 705
IKYMT+G L+R ++ DPLL KYS+I+LDE HER++ TDIL GLLKK+ L++K +
Sbjct: 94 IKYMTDGCLLRHILADPLLSKYSIIILDEAHERSLSTDILFGLLKKLFLQNKPPGRKTEM 153
Query: 706 EIASILSLLQVQDI 719
++ + + L+V +
Sbjct: 154 KVVVMSATLEVDKL 167
Score = 306 (112.8 bits), Expect = 4.5e-44, Sum P(3) = 4.5e-44
Identities = 80/245 (32%), Positives = 127/245 (51%)
Query: 337 KAFAEQLKPLKRTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYYSN- 395
K F + P ++T++K+++ SAT++ +++ +F+ + ++L + G YPV + N
Sbjct: 139 KLFLQNKPPGRKTEMKVVVMSATLEVDKLSEFFG-----HCSVLHIPGRSYPVKEIFCNL 193
Query: 396 ----DPVVN-YVQGVVDTAIKIHESMPVGDILAFVIGLEQIEHIIGIL-KQ-----YHNQ 444
D + YV V + IH + P GDIL F+ G +IE +L K+ Y +
Sbjct: 194 LSPRDTGSSAYVTEAVKVTLDIHLNEPEGDILVFLTGQIEIEKACDLLFKKAESIDYRYE 253
Query: 445 REDLK---LLILPMHGSLPNNEQIKVFRPTPRAMRKIVIATNIAETSITIPGIVYVIDPG 501
D LLILP++GS+ ++Q ++F P P+ +RK V++TNIA TS+TI G+ YV+D G
Sbjct: 254 VHDRSIEGLLILPLYGSMSTDQQKRIFLPAPKGIRKCVVSTNIAATSLTIEGVRYVVDSG 313
Query: 502 FVKARWFNPNTLTNSLVVVPISKXXXXXXXXXXXXXXXXHVYRKNFMYNRLFIHFCV-SR 560
FVK NP + L VVPISK YR +Y+ F C+
Sbjct: 314 FVKQLNHNPRVGLDILEVVPISKSEAMQRAGRAGRTSSGKSYR---LYSTEFWEQCMPDH 370
Query: 561 NIPTI 565
+P I
Sbjct: 371 TVPEI 375
Score = 186 (70.5 bits), Expect = 4.5e-44, Sum P(3) = 4.5e-44
Identities = 45/159 (28%), Positives = 79/159 (49%)
Query: 697 KERDFECSDEIASILSLLQVQDIFIKPSSGALSLKARVLRRNFEVEQG---DLLTLLNIF 753
K +C D + I ++L V+++FI+P +A + + + G D TLLNIF
Sbjct: 452 KAASLDCEDMLLPIAAMLSVENVFIRPGDPQKQKEAELQHQELSSQVGGCNDFATLLNIF 511
Query: 754 KFYEKQENKKQFCHKYFFNYKVLKRAAELKNQMILLLKK----SSIPLVT-SPRNTNAVL 808
+ + ++ +CHKY+ +++ +K A ++ Q+ + K P T T +
Sbjct: 512 EQCKASKSPSAWCHKYWIHWRAVKSALSVEKQLREITSKLKQLPDFPKETFEGSRTELLR 571
Query: 809 KCLTNGFFSNAAYLHYSGVYRTVRGNEDL-YIHPSSVLY 846
+CL G+F N A + + T+ G+ + YIHPSS LY
Sbjct: 572 RCLCAGYFINVARRSAARTFCTMDGHGSIVYIHPSSTLY 610
Score = 147 (56.8 bits), Expect = 1.3e-26, Sum P(3) = 1.3e-26
Identities = 35/107 (32%), Positives = 64/107 (59%)
Query: 41 SRKFSRLYTEASFSQ-LNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLR 99
S K RLY+ + Q + + T PE++RT L+S +L LK L +H+++RF + P +++
Sbjct: 351 SGKSYRLYSTEFWEQCMPDHTVPEIKRTSLTSVILTLKCLSVHDVIRFPYLDRPEERHIL 410
Query: 100 VALELLYSLGAMDVN--GNLTKPVGETMAEMPLHPIHAKVLLSSGSV 144
AL+ LY A+D G++T+ +GE + + PL P + ++ + S+
Sbjct: 411 EALKQLYQCDAIDRTRRGHVTR-LGEFLVQFPLPPNLSCAVIKAASL 456
Score = 102 (41.0 bits), Expect = 4.5e-44, Sum P(3) = 4.5e-44
Identities = 20/43 (46%), Positives = 30/43 (69%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILMECSRK 43
MT+G L+ + DP + KYS+I+LD+ HER++ TDIL +K
Sbjct: 97 MTDGCLLRHILADPLLSKYSIIILDEAHERSLSTDILFGLLKK 139
Score = 38 (18.4 bits), Expect = 2.1e-15, Sum P(3) = 2.1e-15
Identities = 14/52 (26%), Positives = 28/52 (53%)
Query: 649 YMTEGILMREMMTDPLLRKY-SVIMLDEVHERTIFTDILMGLLKKILKDKER 699
++T G + E D L +K S+ EVH+R+I +++ L + D+++
Sbjct: 227 FLT-GQIEIEKACDLLFKKAESIDYRYEVHDRSIEGLLILPLYGSMSTDQQK 277
>GENEDB_PFALCIPARUM|PF10_0294 [details] [associations]
symbol:PF10_0294 "RNA helicase, putative"
species:5833 "Plasmodium falciparum" [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0008380 "RNA splicing"
evidence=ISS] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008380 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 EMBL:AE014185 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316 KO:K12818
HSSP:P05055 RefSeq:XP_001347578.1 ProteinModelPortal:Q8IJA4
IntAct:Q8IJA4 MINT:MINT-1724156 EnsemblProtists:PF10_0294:mRNA
GeneID:810451 KEGG:pfa:PF10_0294 EuPathDB:PlasmoDB:PF3D7_1030100
OMA:HRHSKEH ProtClustDB:CLSZ2433181 Uniprot:Q8IJA4
Length = 1290
Score = 338 (124.0 bits), Expect = 5.2e-44, Sum P(3) = 5.2e-44
Identities = 82/221 (37%), Positives = 127/221 (57%)
Query: 311 EPISQSYLVELS--ILAPGGQDVIGEDMKAFAEQLKPL--KRTQLKLIISSATVDAEEIC 366
E +S + L + S IL + I D+ F LK + KR KLI++SAT+DAE+
Sbjct: 735 ETLSDTLLTKYSFIILDEAHERTISTDI-LFC-LLKDVVRKRADFKLIVTSATLDAEKFS 792
Query: 367 QFYNISASSNATILSVKGHLYPVSVYYSNDPVVNYVQGVVDTAIKIHESMPVGDILAFVI 426
++ N+ I ++ G ++PV + +S +P +YV+ + T + IH + GDIL F+
Sbjct: 793 TYF-----FNSPIFTIPGKIFPVEILHSKEPESDYVEASLITVLNIHLNEHPGDILVFLT 847
Query: 427 GLEQIEHIIGILKQYHNQREDLK---LLILPMHGSLPNNEQIKVFRPTPRAMRKIVIATN 483
G ++I IL + + E + L+ILP++ SLP+ Q +F P P RK ++ATN
Sbjct: 848 GQDEINTACEILHERMKKLESMSPPPLIILPIYSSLPSEMQSVIFEPAPPGCRKCILATN 907
Query: 484 IAETSITIPGIVYVIDPGFVKARWFNPNTLTNSLVVVPISK 524
IAE S+TI GI +VIDPGF K + ++ +SL+V PISK
Sbjct: 908 IAEASLTIDGIFFVIDPGFCKIKKYDSKRDMDSLIVAPISK 948
Score = 311 (114.5 bits), Expect = 5.1e-41, Sum P(3) = 5.1e-41
Identities = 64/116 (55%), Positives = 85/116 (73%)
Query: 587 QYLLEAGWCYDTKLIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTK 646
QYL EA + + ++G T+PRR++ S+A RVSEE LG VGY+IRFDDCT+ D T
Sbjct: 666 QYLHEANYT-EKGIVGCTQPRRVAAMSIAKRVSEEFGCILGQEVGYSIRFDDCTSND-TI 723
Query: 647 IKYMTEGILMREMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKILKDKERDFE 702
IKY+T+G+L+RE ++D LL KYS I+LDE HERTI TDIL LLK +++ K DF+
Sbjct: 724 IKYLTDGMLLRETLSDTLLTKYSFIILDEAHERTISTDILFCLLKDVVR-KRADFK 778
Score = 229 (85.7 bits), Expect = 5.2e-44, Sum P(3) = 5.2e-44
Identities = 50/162 (30%), Positives = 91/162 (56%)
Query: 690 LKKILKDKERDFECSDEIASILSLLQVQDIFIKPSSGALSLKARVLRRNFEVEQGDLLTL 749
L KIL +F C+D++ +I+S+L VQ+IF +P + AL + + F + QGDL+T
Sbjct: 1056 LSKILLTS-LNFNCTDDVVTIVSMLSVQNIFYRPQNKALLADKK--KNKFIMPQGDLITY 1112
Query: 750 LNIFKFYEKQENKKQFCHKYFFNYKVLKRAAELKNQMILLLKKSSIPLVTSPRNTNA--- 806
LNI+ +++ +CH+ F + LKRA +++ QM+ + +K + + S +A
Sbjct: 1113 LNIYNKWKENSFSNYWCHENFIQSRALKRAQDVRKQMLSIFEKYNYQVKKSTSKNDATKY 1172
Query: 807 --VLKCLTNGFFSNAAYLHYSGVYRTVRGNEDLYIHPSSVLY 846
+ K + +G+F++ Y T+ N+ ++IHPSS L+
Sbjct: 1173 VNICKSICSGYFNHVCKRDTQQGYTTLLTNQQVFIHPSSTLF 1214
Score = 211 (79.3 bits), Expect = 3.4e-36, Sum P(3) = 3.4e-36
Identities = 48/100 (48%), Positives = 67/100 (67%)
Query: 43 KFSRLYTEASF-SQLNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRVA 101
K RLYTE ++ ++++E + PE+QR L S VL LKALGI++ L F F P + L +
Sbjct: 965 KCYRLYTEEAYKNEMSEMSVPEIQRINLGSIVLLLKALGINDFLHFDFMDSPSVETLIHS 1024
Query: 102 LELLYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLLSS 141
LE LY LGA+D NG LTK +G+ MA P+ P +K+LL+S
Sbjct: 1025 LENLYYLGALDDNGYLTK-LGKKMANFPMEPNLSKILLTS 1063
Score = 95 (38.5 bits), Expect = 3.4e-36, Sum P(3) = 3.4e-36
Identities = 21/43 (48%), Positives = 28/43 (65%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILMECSRK 43
+T+G+L+ D + KYS I+LD+ HERTI TDIL C K
Sbjct: 727 LTDGMLLRETLSDTLLTKYSFIILDEAHERTISTDILF-CLLK 768
Score = 40 (19.1 bits), Expect = 1.6e-18, Sum P(3) = 1.6e-18
Identities = 10/29 (34%), Positives = 16/29 (55%)
Query: 131 HPIHAKVLLSSGSVLDSAVEILLHRLRGL 159
HP V L+ +++A EIL R++ L
Sbjct: 838 HPGDILVFLTGQDEINTACEILHERMKKL 866
Score = 38 (18.4 bits), Expect = 1.0e-12, Sum P(3) = 1.0e-12
Identities = 16/81 (19%), Positives = 34/81 (41%)
Query: 30 RTIFTDILMECSRKFSRLY-TEASFS-QLNECTPPEMQRTELSSAVLQLKALGIHNILRF 87
R I S +F + E +S + ++CT + L+ +L + L + ++
Sbjct: 686 RVAAMSIAKRVSEEFGCILGQEVGYSIRFDDCTSNDTIIKYLTDGMLLRETLSDTLLTKY 745
Query: 88 SFPSPPPAQNLRVALELLYSL 108
SF A ++ ++L+ L
Sbjct: 746 SFIILDEAHERTISTDILFCL 766
Score = 37 (18.1 bits), Expect = 5.2e-44, Sum P(3) = 5.2e-44
Identities = 15/53 (28%), Positives = 23/53 (43%)
Query: 138 LLSSGSVLDSAVEILLHRLRGLCDNVDSGPETFHDHEMCFSIRGNQTQPLLLR 190
L+ SG V D E + + + L +D E D E I N+ +P L+
Sbjct: 473 LIKSGVVFD---ENIRNEYKNL--KID---EKIEDEEDIIEIEVNEKEPAFLK 517
>UNIPROTKB|Q8IJA4 [details] [associations]
symbol:PF10_0294 "RNA helicase, putative" species:36329
"Plasmodium falciparum 3D7" [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008380 "RNA splicing" evidence=ISS]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008380 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 EMBL:AE014185 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316 KO:K12818
HSSP:P05055 RefSeq:XP_001347578.1 ProteinModelPortal:Q8IJA4
IntAct:Q8IJA4 MINT:MINT-1724156 EnsemblProtists:PF10_0294:mRNA
GeneID:810451 KEGG:pfa:PF10_0294 EuPathDB:PlasmoDB:PF3D7_1030100
OMA:HRHSKEH ProtClustDB:CLSZ2433181 Uniprot:Q8IJA4
Length = 1290
Score = 338 (124.0 bits), Expect = 5.2e-44, Sum P(3) = 5.2e-44
Identities = 82/221 (37%), Positives = 127/221 (57%)
Query: 311 EPISQSYLVELS--ILAPGGQDVIGEDMKAFAEQLKPL--KRTQLKLIISSATVDAEEIC 366
E +S + L + S IL + I D+ F LK + KR KLI++SAT+DAE+
Sbjct: 735 ETLSDTLLTKYSFIILDEAHERTISTDI-LFC-LLKDVVRKRADFKLIVTSATLDAEKFS 792
Query: 367 QFYNISASSNATILSVKGHLYPVSVYYSNDPVVNYVQGVVDTAIKIHESMPVGDILAFVI 426
++ N+ I ++ G ++PV + +S +P +YV+ + T + IH + GDIL F+
Sbjct: 793 TYF-----FNSPIFTIPGKIFPVEILHSKEPESDYVEASLITVLNIHLNEHPGDILVFLT 847
Query: 427 GLEQIEHIIGILKQYHNQREDLK---LLILPMHGSLPNNEQIKVFRPTPRAMRKIVIATN 483
G ++I IL + + E + L+ILP++ SLP+ Q +F P P RK ++ATN
Sbjct: 848 GQDEINTACEILHERMKKLESMSPPPLIILPIYSSLPSEMQSVIFEPAPPGCRKCILATN 907
Query: 484 IAETSITIPGIVYVIDPGFVKARWFNPNTLTNSLVVVPISK 524
IAE S+TI GI +VIDPGF K + ++ +SL+V PISK
Sbjct: 908 IAEASLTIDGIFFVIDPGFCKIKKYDSKRDMDSLIVAPISK 948
Score = 311 (114.5 bits), Expect = 5.1e-41, Sum P(3) = 5.1e-41
Identities = 64/116 (55%), Positives = 85/116 (73%)
Query: 587 QYLLEAGWCYDTKLIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTK 646
QYL EA + + ++G T+PRR++ S+A RVSEE LG VGY+IRFDDCT+ D T
Sbjct: 666 QYLHEANYT-EKGIVGCTQPRRVAAMSIAKRVSEEFGCILGQEVGYSIRFDDCTSND-TI 723
Query: 647 IKYMTEGILMREMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKILKDKERDFE 702
IKY+T+G+L+RE ++D LL KYS I+LDE HERTI TDIL LLK +++ K DF+
Sbjct: 724 IKYLTDGMLLRETLSDTLLTKYSFIILDEAHERTISTDILFCLLKDVVR-KRADFK 778
Score = 229 (85.7 bits), Expect = 5.2e-44, Sum P(3) = 5.2e-44
Identities = 50/162 (30%), Positives = 91/162 (56%)
Query: 690 LKKILKDKERDFECSDEIASILSLLQVQDIFIKPSSGALSLKARVLRRNFEVEQGDLLTL 749
L KIL +F C+D++ +I+S+L VQ+IF +P + AL + + F + QGDL+T
Sbjct: 1056 LSKILLTS-LNFNCTDDVVTIVSMLSVQNIFYRPQNKALLADKK--KNKFIMPQGDLITY 1112
Query: 750 LNIFKFYEKQENKKQFCHKYFFNYKVLKRAAELKNQMILLLKKSSIPLVTSPRNTNA--- 806
LNI+ +++ +CH+ F + LKRA +++ QM+ + +K + + S +A
Sbjct: 1113 LNIYNKWKENSFSNYWCHENFIQSRALKRAQDVRKQMLSIFEKYNYQVKKSTSKNDATKY 1172
Query: 807 --VLKCLTNGFFSNAAYLHYSGVYRTVRGNEDLYIHPSSVLY 846
+ K + +G+F++ Y T+ N+ ++IHPSS L+
Sbjct: 1173 VNICKSICSGYFNHVCKRDTQQGYTTLLTNQQVFIHPSSTLF 1214
Score = 211 (79.3 bits), Expect = 3.4e-36, Sum P(3) = 3.4e-36
Identities = 48/100 (48%), Positives = 67/100 (67%)
Query: 43 KFSRLYTEASF-SQLNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRVA 101
K RLYTE ++ ++++E + PE+QR L S VL LKALGI++ L F F P + L +
Sbjct: 965 KCYRLYTEEAYKNEMSEMSVPEIQRINLGSIVLLLKALGINDFLHFDFMDSPSVETLIHS 1024
Query: 102 LELLYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLLSS 141
LE LY LGA+D NG LTK +G+ MA P+ P +K+LL+S
Sbjct: 1025 LENLYYLGALDDNGYLTK-LGKKMANFPMEPNLSKILLTS 1063
Score = 95 (38.5 bits), Expect = 3.4e-36, Sum P(3) = 3.4e-36
Identities = 21/43 (48%), Positives = 28/43 (65%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILMECSRK 43
+T+G+L+ D + KYS I+LD+ HERTI TDIL C K
Sbjct: 727 LTDGMLLRETLSDTLLTKYSFIILDEAHERTISTDILF-CLLK 768
Score = 40 (19.1 bits), Expect = 1.6e-18, Sum P(3) = 1.6e-18
Identities = 10/29 (34%), Positives = 16/29 (55%)
Query: 131 HPIHAKVLLSSGSVLDSAVEILLHRLRGL 159
HP V L+ +++A EIL R++ L
Sbjct: 838 HPGDILVFLTGQDEINTACEILHERMKKL 866
Score = 38 (18.4 bits), Expect = 1.0e-12, Sum P(3) = 1.0e-12
Identities = 16/81 (19%), Positives = 34/81 (41%)
Query: 30 RTIFTDILMECSRKFSRLY-TEASFS-QLNECTPPEMQRTELSSAVLQLKALGIHNILRF 87
R I S +F + E +S + ++CT + L+ +L + L + ++
Sbjct: 686 RVAAMSIAKRVSEEFGCILGQEVGYSIRFDDCTSNDTIIKYLTDGMLLRETLSDTLLTKY 745
Query: 88 SFPSPPPAQNLRVALELLYSL 108
SF A ++ ++L+ L
Sbjct: 746 SFIILDEAHERTISTDILFCL 766
Score = 37 (18.1 bits), Expect = 5.2e-44, Sum P(3) = 5.2e-44
Identities = 15/53 (28%), Positives = 23/53 (43%)
Query: 138 LLSSGSVLDSAVEILLHRLRGLCDNVDSGPETFHDHEMCFSIRGNQTQPLLLR 190
L+ SG V D E + + + L +D E D E I N+ +P L+
Sbjct: 473 LIKSGVVFD---ENIRNEYKNL--KID---EKIEDEEDIIEIEVNEKEPAFLK 517
>ZFIN|ZDB-GENE-040426-1144 [details] [associations]
symbol:dhx38 "DEAH (Asp-Glu-Ala-His) box
polypeptide 38" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 ZFIN:ZDB-GENE-040426-1144 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
HOVERGEN:HBG039428 KO:K12815 CTD:9785 OrthoDB:EOG4Z62MS
EMBL:BC063744 IPI:IPI00493120 RefSeq:NP_957170.1 UniGene:Dr.38854
ProteinModelPortal:Q6P404 STRING:Q6P404 PRIDE:Q6P404 GeneID:393850
KEGG:dre:393850 NextBio:20814835 ArrayExpress:Q6P404 Bgee:Q6P404
Uniprot:Q6P404
Length = 1258
Score = 331 (121.6 bits), Expect = 8.4e-44, Sum P(3) = 8.4e-44
Identities = 76/221 (34%), Positives = 123/221 (55%)
Query: 347 KRTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYYSNDPVVNYVQGVV 406
+R+ LKLI++SAT+D+++ F+ N I + G +PV + +S P +YV+ V
Sbjct: 705 RRSDLKLIVTSATMDSDKFASFFG-----NVPIFHIPGRTFPVDILFSKTPQEDYVEAAV 759
Query: 407 DTAIKIHESMPVGDILAFVIGLEQIEHIIG-ILKQYHNQREDLKLLILPMHGSLPNNEQI 465
A++IH S VGDIL F+ G E IE I+++ + L +LP++ LP++ Q
Sbjct: 760 KQALQIHLSGMVGDILIFMPGQEDIEVTSDQIVERLADLENAPALAVLPIYSQLPSDLQA 819
Query: 466 KVFRPTPRAMRKIVIATNIAETSITIPGIVYVIDPGFVKARWFNPNTLTNSLVVVPISKX 525
K+F+ P +RK ++ATNIAETS+T+ GI++V+D G+ K + FNP ++L V PIS+
Sbjct: 820 KIFQKAPDGVRKCIVATNIAETSLTVDGIMFVVDSGYCKLKVFNPRIGMDALQVYPISQA 879
Query: 526 XXXXXXXXXXXXXXXHVYRKNFMYNR-LFIHFCVSRNIPTI 565
YR +Y + F + ++ IP I
Sbjct: 880 NANQRAGRAGRTGPGQCYR---LYTQSAFKNEMLTTTIPEI 917
Score = 282 (104.3 bits), Expect = 2.7e-34, Sum P(2) = 2.7e-34
Identities = 54/108 (50%), Positives = 79/108 (73%)
Query: 587 QYLLEAGWCYDTKLIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTK 646
QYL E G+ ++G T+PRR++ S+A RVSEE+ + LG VGY IRF+DCT+E T
Sbjct: 598 QYLHEDGYT-SYGMVGCTQPRRVAAMSVAKRVSEEMNSNLGEEVGYAIRFEDCTSEK-TM 655
Query: 647 IKYMTEGILMREMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKIL 694
IKYMT+GIL+RE + + L YS +++DE HER++ TD+L GLL++++
Sbjct: 656 IKYMTDGILLRESLRESDLDHYSAVIMDEAHERSLNTDVLFGLLREVV 703
Score = 204 (76.9 bits), Expect = 6.8e-30, Sum P(3) = 6.8e-30
Identities = 47/109 (43%), Positives = 71/109 (65%)
Query: 46 RLYTEASF-SQLNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRVALEL 104
RLYT+++F +++ T PE+QRT L++ VL LK+LG+ ++L F F PPP N+ ++
Sbjct: 898 RLYTQSAFKNEMLTTTIPEIQRTNLANVVLLLKSLGVQDLLLFHFMDPPPEDNMLNSMYQ 957
Query: 105 LYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLLSSGSVLDSAVEILL 153
L+ LGA+D G LT P G M E PL P +K+L+ S + SA +IL+
Sbjct: 958 LWILGALDNTGALT-PTGRLMVEFPLDPALSKMLIVSCDMSCSA-DILI 1004
Score = 183 (69.5 bits), Expect = 8.4e-44, Sum P(3) = 8.4e-44
Identities = 41/147 (27%), Positives = 76/147 (51%)
Query: 700 DFECSDEIASILSLLQVQDIFIKPSSGALSLKARVLRRNFEVEQGDLLTLLNIFKFYEKQ 759
D CS +I I+S+L V IF +P G +V R F V + D LT LN++ ++
Sbjct: 995 DMSCSADILIIVSMLSVPSIFYRPK-GREEESDQV-REKFSVPESDHLTYLNVYLQWKNN 1052
Query: 760 ENKKQFCHKYFFNYKVLKRAAELKNQMILLLKKSSIPLVTSPRNTNAVLKCLTNGFFSNA 819
+C+ +F + K +++ E++ Q+ ++ + + L++ + + + KC+ +F A
Sbjct: 1053 NYSSIWCNDHFIHTKAMRKVREVRAQLKDIMVQQKMNLISCGSDWDVIRKCICAAYFHQA 1112
Query: 820 AYLHYSGVYRTVRGNEDLYIHPSSVLY 846
A L G Y VR ++HP+S L+
Sbjct: 1113 AKLKGIGEYVNVRTGMPCHLHPTSALF 1139
Score = 88 (36.0 bits), Expect = 8.4e-44, Sum P(3) = 8.4e-44
Identities = 15/43 (34%), Positives = 28/43 (65%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILMECSRK 43
MT+GIL+ + ++ YS +++D+ HER++ TD+L R+
Sbjct: 659 MTDGILLRESLRESDLDHYSAVIMDEAHERSLNTDVLFGLLRE 701
Score = 45 (20.9 bits), Expect = 3.0e-09, Sum P(2) = 3.0e-09
Identities = 7/19 (36%), Positives = 15/19 (78%)
Query: 434 IIGILKQYHNQREDLKLLI 452
+ G+L++ ++R DLKL++
Sbjct: 695 LFGLLREVVSRRSDLKLIV 713
Score = 44 (20.5 bits), Expect = 2.3e-29, Sum P(3) = 2.3e-29
Identities = 18/62 (29%), Positives = 27/62 (43%)
Query: 653 GILMREMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKIL-KDKERDFECSDEIASIL 711
G LM E DP L K ++ D I + M + I + K R+ E SD++
Sbjct: 974 GRLMVEFPLDPALSKMLIVSCDMSCSADILIIVSMLSVPSIFYRPKGREEE-SDQVREKF 1032
Query: 712 SL 713
S+
Sbjct: 1033 SV 1034
>FB|FBgn0026713 [details] [associations]
symbol:l(1)G0007 "lethal (1) G0007" species:7227 "Drosophila
melanogaster" [GO:0008026 "ATP-dependent helicase activity"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=ISS] [GO:0005681 "spliceosomal complex" evidence=ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0000381 "regulation of alternative mRNA
splicing, via spliceosome" evidence=IMP] [GO:0002121 "inter-male
aggressive behavior" evidence=IMP] [GO:0007476 "imaginal
disc-derived wing morphogenesis" evidence=IMP] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:AE014298 GO:GO:0005681 GO:GO:0003676 GO:GO:0002121
GO:GO:0007476 GO:GO:0000398 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
GO:GO:0000381 KO:K12815 GeneTree:ENSGT00700000104877 OMA:PSRSTWE
UniGene:Dm.4249 GeneID:32373 KEGG:dme:Dmel_CG32604
FlyBase:FBgn0026713 ChiTaRS:l(1)G0007 GenomeRNAi:32373
NextBio:778160 EMBL:AY058553 RefSeq:NP_572947.1 SMR:Q9VY54
MINT:MINT-334469 STRING:Q9VY54 EnsemblMetazoa:FBtr0073900
UCSC:CG32604-RA InParanoid:Q9VY54 Uniprot:Q9VY54
Length = 1222
Score = 310 (114.2 bits), Expect = 1.0e-43, Sum P(3) = 1.0e-43
Identities = 65/179 (36%), Positives = 110/179 (61%)
Query: 347 KRTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYYSNDPVVNYVQGVV 406
+R LKLI++SAT+D+ + F+ N ++ G +PV V +S + +YV+ V
Sbjct: 676 RRHDLKLIVTSATMDSSKFATFFG-----NVPTFTIPGRTFPVDVMFSKNTCEDYVESAV 730
Query: 407 DTAIKIHESMPVGDILAFVIGLEQIEHIIGILKQYHNQREDLKLL-ILPMHGSLPNNEQI 465
A+++H + GD+L F+ G E IE +L++ + ++ L ILP++ LP++ Q
Sbjct: 731 KQALQVHLTPNEGDMLIFMPGQEDIEVTCEVLEERLAEIDNAPALSILPIYSQLPSDLQA 790
Query: 466 KVFRPTPRAMRKIVIATNIAETSITIPGIVYVIDPGFVKARWFNPNTLTNSLVVVPISK 524
K+F+ + +RK V+ATNIAETS+T+ GI+YVID G+ K + +NP ++L + PIS+
Sbjct: 791 KIFQKSSDGLRKCVVATNIAETSLTVDGIIYVIDSGYCKLKVYNPRIGMDALQIYPISQ 849
Score = 296 (109.3 bits), Expect = 1.8e-36, Sum P(2) = 1.8e-36
Identities = 59/108 (54%), Positives = 80/108 (74%)
Query: 587 QYLLEAGWCYDTKLIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTK 646
QYL E G+ +IG T+PRR++ S+A RVS+E+ T LG VGY IRF+DCT+E T
Sbjct: 569 QYLHEDGYS-KRGMIGCTQPRRVAAMSVAKRVSDEMDTQLGEDVGYAIRFEDCTSER-TV 626
Query: 647 IKYMTEGILMREMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKIL 694
IKYMT+GIL+RE + DP L YS I++DE HER++ TD+L GLL++I+
Sbjct: 627 IKYMTDGILLRESLRDPELDSYSAIIMDEAHERSLSTDVLFGLLREIV 674
Score = 191 (72.3 bits), Expect = 1.1e-30, Sum P(3) = 1.1e-30
Identities = 46/109 (42%), Positives = 69/109 (63%)
Query: 46 RLYTEASFS-QLNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRVALEL 104
RLYT+ + +L T PE+QRT L++ VL LK+LG+ ++L+F F PPP N+ +L
Sbjct: 869 RLYTQRQYKDELLALTVPEIQRTNLANTVLLLKSLGVVDLLQFHFMDPPPQDNILNSLYQ 928
Query: 105 LYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLLSSGSVLDSAVEILL 153
L+ LGA+D G LT +G MAE PL P ++L+ + + SA E+L+
Sbjct: 929 LWILGALDHTGALTT-LGRQMAEFPLDPPQCQMLIVACRMGCSA-EVLI 975
Score = 189 (71.6 bits), Expect = 1.0e-43, Sum P(3) = 1.0e-43
Identities = 40/146 (27%), Positives = 81/146 (55%)
Query: 703 CSDEIASILSLLQVQDIFIKPSSGALSLKARVLRRNFEVEQGDLLTLLNIFKFYEKQENK 762
CS E+ I+S+L V IF +P G +A +R F+ + D LT LN+++ + +
Sbjct: 969 CSAEVLIIVSMLSVPSIFYRPK-GRED-EADGVREKFQRPESDHLTYLNVYQQWRQNNYS 1026
Query: 763 KQFCHKYFFNYKVLKRAAELKNQMILLLKKSSIPLVTSPRNTNAVLKCLTNGFFSNAAYL 822
+C+++F + K +++ E++ Q+ ++ + ++ +++ + + V KC+ + +F AA L
Sbjct: 1027 STWCNEHFIHIKAMRKVREVRQQLKDIMTQQNLSVISCGIDWDIVRKCICSAYFYQAARL 1086
Query: 823 HYSGVYRTVRGNEDLYIHPSSVLYTL 848
G Y +R ++HP+S LY L
Sbjct: 1087 KGIGEYVNLRTGMPCHLHPTSALYGL 1112
Score = 103 (41.3 bits), Expect = 1.0e-43, Sum P(3) = 1.0e-43
Identities = 18/43 (41%), Positives = 29/43 (67%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILMECSRK 43
MT+GIL+ DP ++ YS I++D+ HER++ TD+L R+
Sbjct: 630 MTDGILLRESLRDPELDSYSAIIMDEAHERSLSTDVLFGLLRE 672
Score = 42 (19.8 bits), Expect = 1.1e-08, Sum P(3) = 1.1e-08
Identities = 7/19 (36%), Positives = 14/19 (73%)
Query: 434 IIGILKQYHNQREDLKLLI 452
+ G+L++ +R DLKL++
Sbjct: 666 LFGLLREIVARRHDLKLIV 684
Score = 38 (18.4 bits), Expect = 3.7e-15, Sum P(3) = 3.7e-15
Identities = 21/73 (28%), Positives = 33/73 (45%)
Query: 341 EQLKPLKRTQLKLIISSATVDAEE----ICQFYNISASSNATI---LSVK-G---HLYPV 389
+QLK + TQ L + S +D + IC Y A+ I ++++ G HL+P
Sbjct: 1048 QQLKDIM-TQQNLSVISCGIDWDIVRKCICSAYFYQAARLKGIGEYVNLRTGMPCHLHPT 1106
Query: 390 SVYYSNDPVVNYV 402
S Y +YV
Sbjct: 1107 SALYGLGTTPDYV 1119
Score = 37 (18.1 bits), Expect = 7.6e-15, Sum P(3) = 7.6e-15
Identities = 8/20 (40%), Positives = 10/20 (50%)
Query: 561 NIPTIPNDPKDVKCDVMFHK 580
N+PT + DVMF K
Sbjct: 700 NVPTFTIPGRTFPVDVMFSK 719
>DICTYBASE|DDB_G0285213 [details] [associations]
symbol:dhx15 "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA;ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 dictyBase:DDB_G0285213 GO:GO:0005524
GenomeReviews:CM000153_GR GO:GO:0008380 GO:GO:0006397 GO:GO:0005681
GO:GO:0003676 EMBL:AAFI02000076 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 KO:K12820 OMA:TVLQIHA RefSeq:XP_638323.1
ProteinModelPortal:Q54NJ4 EnsemblProtists:DDB0233403 GeneID:8624993
KEGG:ddi:DDB_G0285213 Uniprot:Q54NJ4
Length = 727
Score = 336 (123.3 bits), Expect = 1.6e-43, Sum P(2) = 1.6e-43
Identities = 87/254 (34%), Positives = 139/254 (54%)
Query: 274 MDFEYISR-GYMFRKGRMKILVSKIFKMSQGKP-SDSGVEPISQSYLVELSILAPGGQDV 331
MDFE GY R + + + ++ G +S +P Y ++ IL +
Sbjct: 147 MDFELGEEVGYSIRFEELSSARTFMKYLTDGMLLRESMSDPTLNKY--DVIILDEAHERT 204
Query: 332 IGEDMKAFAEQLKPLKRTQ-LKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVS 390
+ D+ F LKR + LKLI+ SAT++A + +++ NA ++ V G L+PV
Sbjct: 205 LSTDI-LFGLIKDILKRRKDLKLIVMSATLEAGKFQKYFE-----NAPLIKVPGRLHPVE 258
Query: 391 VYYSNDPVVNYVQGVVDTAIKIHESMPVGDILAFVIGLEQIEHIIGILKQYHNQREDLKL 450
++Y+ + +Y++ V T I IH + GDIL F+ G E+IE +++ +R +
Sbjct: 259 IFYTEEAAKDYLESAVRTVIDIHTNEGTGDILVFLTGEEEIEDTCAKIQRETRERGLPPM 318
Query: 451 LILPMHGSLPNNEQIKVFRPTPRAMRKIVIATNIAETSITIPGIVYVIDPGFVKARWFNP 510
LP++ SLP +Q K+F RK +++TNIAETS+TI GIV+V+DPGF K + +NP
Sbjct: 319 KTLPLYSSLPIYQQSKIFDTCKE--RKCIVSTNIAETSLTIDGIVFVVDPGFSKQKTYNP 376
Query: 511 NTLTNSLVVVPISK 524
+ SL+V PISK
Sbjct: 377 RSRVESLLVAPISK 390
Score = 301 (111.0 bits), Expect = 1.3e-39, Sum P(2) = 1.3e-39
Identities = 58/116 (50%), Positives = 87/116 (75%)
Query: 587 QYLLEAGWCYDTKLIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTK 646
Q++++AG K++G+T+PRR++ S+A RVSEE+ LG VGY+IRF++ ++ T
Sbjct: 112 QFVVDAGLIRPGKMVGVTQPRRVAAISVAKRVSEEMDFELGEEVGYSIRFEELSSAR-TF 170
Query: 647 IKYMTEGILMREMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKILKDKERDFE 702
+KY+T+G+L+RE M+DP L KY VI+LDE HERT+ TDIL GL+K ILK + +D +
Sbjct: 171 MKYLTDGMLLRESMSDPTLNKYDVIILDEAHERTLSTDILFGLIKDILK-RRKDLK 225
Score = 206 (77.6 bits), Expect = 1.6e-43, Sum P(2) = 1.6e-43
Identities = 47/173 (27%), Positives = 91/173 (52%)
Query: 689 LLKKILKDKERDFECSDEIASILSLLQVQDIFIKPSSGALSLKARVLRRNFEVEQGDLLT 748
L K ++ ER CS+EI +I ++L + F++P + +A +++F+ GD LT
Sbjct: 498 LSKMLIVSAERS--CSNEILTIAAMLSAPNCFMRPKDNRI--EADSAKKSFDHFDGDHLT 553
Query: 749 LLNIFKFYEKQENKKQFCHKYFFNYKVLKRAAELKNQMILLLKKSSIPLVTSPRNTNA-- 806
+LN++ ++K +C+ F N++ +K+A +++Q+ +L + +PLV+ N+
Sbjct: 554 MLNVYHSFKKNGEDPTWCYDNFLNHRAIKQADSVRSQLARILTRFKLPLVSGDVNSKFYY 613
Query: 807 --VLKCLTNGFFSNAAYLHYSGVYRTVRGNEDLYIHPSSVLYTLQQPQCTHLE 857
+ KC+ GFF A +Y T+ + + HPS+ L T + C + E
Sbjct: 614 ENIKKCIAAGFFMQVAKCEKKNIYFTLGDEQSVIFHPSTGL-TRRPEFCIYNE 665
Score = 192 (72.6 bits), Expect = 5.2e-34, Sum P(3) = 5.2e-34
Identities = 45/100 (45%), Positives = 64/100 (64%)
Query: 43 KFSRLYTEASFSQLN-ECTPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRVA 101
K RLYTE +F +L + T PE+ R+ L+S VLQL LG+ +++ F F PP L A
Sbjct: 407 KCFRLYTEKAFKELMIQQTHPEILRSNLASVVLQLLKLGVVDLVHFDFMDPPVPDTLIRA 466
Query: 102 LELLYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLLSS 141
LE+L+ LGA+D G LT+ +G M+E PL P +K+L+ S
Sbjct: 467 LEVLHYLGALDDEGQLTE-IGSIMSEFPLDPQLSKMLIVS 505
Score = 107 (42.7 bits), Expect = 5.2e-34, Sum P(3) = 5.2e-34
Identities = 19/37 (51%), Positives = 28/37 (75%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDIL 37
+T+G+L+ DP++ KY VI+LD+ HERT+ TDIL
Sbjct: 174 LTDGMLLRESMSDPTLNKYDVIILDEAHERTLSTDIL 210
Score = 40 (19.1 bits), Expect = 4.0e-26, Sum P(2) = 4.0e-26
Identities = 11/35 (31%), Positives = 16/35 (45%)
Query: 650 MTE-GILMREMMTDPLLRKYSVIMLDEVHERTIFT 683
+TE G +M E DP L K ++ + I T
Sbjct: 482 LTEIGSIMSEFPLDPQLSKMLIVSAERSCSNEILT 516
Score = 38 (18.4 bits), Expect = 6.4e-26, Sum P(2) = 6.4e-26
Identities = 8/20 (40%), Positives = 11/20 (55%)
Query: 581 VFFSFFQYLLEAGWCYDTKL 600
V+ SF + + WCYD L
Sbjct: 557 VYHSFKKNGEDPTWCYDNFL 576
>FB|FBgn0033160 [details] [associations]
symbol:CG11107 species:7227 "Drosophila melanogaster"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0000398
"mRNA splicing, via spliceosome" evidence=IC;ISS] [GO:0005681
"spliceosomal complex" evidence=ISS] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
[GO:0071011 "precatalytic spliceosome" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 EMBL:AE013599
GO:GO:0005524 GO:GO:0022008 GO:GO:0003676 GO:GO:0071011
GO:GO:0000398 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 GO:GO:0016779 KO:K12820 GeneTree:ENSGT00650000093246
OMA:TVLQIHA EMBL:AY058484 RefSeq:NP_610269.1 UniGene:Dm.4189
SMR:Q7K3M5 STRING:Q7K3M5 EnsemblMetazoa:FBtr0088966 GeneID:35654
KEGG:dme:Dmel_CG11107 UCSC:CG11107-RA FlyBase:FBgn0033160
InParanoid:Q7K3M5 OrthoDB:EOG4D254T GenomeRNAi:35654 NextBio:794560
Uniprot:Q7K3M5
Length = 729
Score = 337 (123.7 bits), Expect = 2.5e-43, Sum P(2) = 2.5e-43
Identities = 74/187 (39%), Positives = 119/187 (63%)
Query: 347 KRTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYYSNDPVVNYVQGVV 406
+R+ LKL++ SAT+DA + Q+++ NA ++ V G +PV ++Y+ +P +Y++ +
Sbjct: 215 QRSDLKLVVMSATLDAGKFQQYFD-----NAPLMKVPGRTHPVEIFYTPEPERDYLEAAI 269
Query: 407 DTAIKIHESMPV-GDILAFVIGLEQIEHIIGILK-QYHNQREDL-KLLILPMHGSLPNNE 463
T I+IH + GDIL F+ G E+IE +K + N ++ +L +P++ +LP N
Sbjct: 270 RTVIQIHMCEEIEGDILMFLTGQEEIEEACKRIKREIDNLGSEIGELKCIPLYSTLPPNL 329
Query: 464 QIKVFRPTPR-----AM-RKIVIATNIAETSITIPGIVYVIDPGFVKARWFNPNTLTNSL 517
Q ++F P P A+ RK+V++TNIAETS+TI G+V+VIDPGF K + +NP SL
Sbjct: 330 QQRIFEPAPPPNANGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESL 389
Query: 518 VVVPISK 524
+V PISK
Sbjct: 390 LVSPISK 396
Score = 300 (110.7 bits), Expect = 3.5e-39, Sum P(2) = 3.5e-39
Identities = 57/110 (51%), Positives = 81/110 (73%)
Query: 594 WCYD------TKLIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTKI 647
WC D K + T+PRR++ S+A RVSEE+ LG VGY+IRF+DC+T T +
Sbjct: 108 WCVDFAVSKGRKGVSCTQPRRVAAMSVAQRVSEEMDVKLGEEVGYSIRFEDCSTAK-TLL 166
Query: 648 KYMTEGILMREMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKILKDK 697
KYMT+G+L+RE M+DP+L +Y VI+LDE HERT+ TDILMG+LK++++ +
Sbjct: 167 KYMTDGMLLREAMSDPMLDQYQVILLDEAHERTLATDILMGVLKEVIRQR 216
Score = 205 (77.2 bits), Expect = 1.0e-28, Sum P(2) = 1.0e-28
Identities = 47/100 (47%), Positives = 66/100 (66%)
Query: 43 KFSRLYTEASF-SQLNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRVA 101
K RLYTE +F +++ + T PE+ R+ L + VLQLK LGI +++ F F PP + L A
Sbjct: 413 KCFRLYTEKAFKNEMQDNTYPEILRSNLGTVVLQLKKLGIDDLVHFDFMDPPAPETLMRA 472
Query: 102 LELLYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLLSS 141
LELL L A+D +GNLT +G M+E PL P AK+L++S
Sbjct: 473 LELLNYLAALDDDGNLTD-LGAVMSEFPLDPQLAKMLIAS 511
Score = 203 (76.5 bits), Expect = 2.5e-43, Sum P(2) = 2.5e-43
Identities = 44/148 (29%), Positives = 80/148 (54%)
Query: 703 CSDEIASILSLLQVQDIFIKPSSGALSLKARVLRRNFEVEQGDLLTLLNIFKFYEKQENK 762
CS+EI SI ++L V F++P+ + +R F GD LTLLN++ +++
Sbjct: 516 CSNEILSITAMLSVPQCFVRPNEAKKAADEAKMR--FAHIDGDHLTLLNVYHAFKQSSED 573
Query: 763 KQFCHKYFFNYKVLKRAAELKNQMILL-----LKKSSIPLVTSPRNTNAVLKCLTNGFFS 817
+C++ F N++ LK A ++ Q+ + L+++S + N + K L GFF
Sbjct: 574 PNWCYENFINFRSLKSADNVRQQLARIMDRFNLRRTSTEFTSKDYYVN-IRKALVQGFFM 632
Query: 818 NAAYLHYSGVYRTVRGNEDLYIHPSSVL 845
A+L +G Y T++ N+++ +HPS+ L
Sbjct: 633 QVAHLERTGYYLTIKDNQNVQLHPSTCL 660
Score = 111 (44.1 bits), Expect = 6.9e-19, Sum P(2) = 6.9e-19
Identities = 29/93 (31%), Positives = 48/93 (51%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILMECSRKFSRLYTEASFSQLNECT 60
MT+G+L+ DP +++Y VI+LD+ HERT+ TDILM ++ R ++ ++
Sbjct: 169 MTDGMLLREAMSDPMLDQYQVILLDEAHERTLATDILMGVLKEVIRQRSDLKLVVMSATL 228
Query: 61 PPEMQRTELSSAVLQLKALG-IHNILRFSFPSP 92
+ +A L +K G H + F P P
Sbjct: 229 DAGKFQQYFDNAPL-MKVPGRTHPVEIFYTPEP 260
Score = 54 (24.1 bits), Expect = 5.8e-13, Sum P(2) = 5.8e-13
Identities = 9/20 (45%), Positives = 16/20 (80%)
Query: 434 IIGILKQYHNQREDLKLLIL 453
++G+LK+ QR DLKL+++
Sbjct: 205 LMGVLKEVIRQRSDLKLVVM 224
Score = 41 (19.5 bits), Expect = 1.3e-11, Sum P(2) = 1.3e-11
Identities = 13/55 (23%), Positives = 26/55 (47%)
Query: 59 CTPPEMQRTELSSAVLQLKALGIHNIL------RFSFPSPPPAQNLRVALELLYS 107
C + + L S + +LK + +++ L R P+PPP N + +++ S
Sbjct: 299 CKRIKREIDNLGSEIGELKCIPLYSTLPPNLQQRIFEPAPPPNANGAIGRKVVVS 353
Score = 38 (18.4 bits), Expect = 5.1e-26, Sum P(2) = 5.1e-26
Identities = 6/17 (35%), Positives = 10/17 (58%)
Query: 581 VFFSFFQYLLEAGWCYD 597
V+ +F Q + WCY+
Sbjct: 563 VYHAFKQSSEDPNWCYE 579
>UNIPROTKB|Q92620 [details] [associations]
symbol:DHX38 "Pre-mRNA-splicing factor ATP-dependent RNA
helicase PRP16" species:9606 "Homo sapiens" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC;IDA;TAS]
[GO:0005634 "nucleus" evidence=NAS] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0006369 "termination of RNA polymerase II
transcription" evidence=TAS] [GO:0006406 "mRNA export from nucleus"
evidence=TAS] [GO:0008380 "RNA splicing" evidence=TAS] [GO:0010467
"gene expression" evidence=TAS] [GO:0031124 "mRNA 3'-end
processing" evidence=TAS] Reactome:REACT_71 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 EMBL:AC004682
GO:GO:0005524 GO:GO:0005654 Reactome:REACT_1675 GO:GO:0003676
GO:GO:0006406 GO:GO:0000398 GO:GO:0071013 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:CH471166 Reactome:REACT_1788
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 GO:GO:0006369 GO:GO:0031124 Reactome:REACT_78
HOVERGEN:HBG039428 KO:K12815 OMA:PSRSTWE CTD:9785 EMBL:AF038391
EMBL:D86977 EMBL:BC004235 EMBL:BC008340 IPI:IPI00294211
RefSeq:NP_054722.2 UniGene:Hs.151218 ProteinModelPortal:Q92620
SMR:Q92620 IntAct:Q92620 STRING:Q92620 PhosphoSite:Q92620
DMDM:85700389 PaxDb:Q92620 PeptideAtlas:Q92620 PRIDE:Q92620
DNASU:9785 Ensembl:ENST00000268482 GeneID:9785 KEGG:hsa:9785
UCSC:uc002fcb.3 GeneCards:GC16P072127 HGNC:HGNC:17211 HPA:HPA041347
MIM:605584 neXtProt:NX_Q92620 PharmGKB:PA27225 InParanoid:Q92620
OrthoDB:EOG4Z62MS PhylomeDB:Q92620 ChiTaRS:DHX38 GenomeRNAi:9785
NextBio:36846 ArrayExpress:Q92620 Bgee:Q92620 CleanEx:HS_DHX38
Genevestigator:Q92620 GermOnline:ENSG00000140829 Uniprot:Q92620
Length = 1227
Score = 331 (121.6 bits), Expect = 3.2e-43, Sum P(3) = 3.2e-43
Identities = 68/179 (37%), Positives = 111/179 (62%)
Query: 347 KRTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYYSNDPVVNYVQGVV 406
+R+ LKLI++SAT+DAE+ F+ N I + G +PV + +S P +YV+ V
Sbjct: 674 RRSDLKLIVTSATMDAEKFAAFFG-----NVPIFHIPGRTFPVDILFSKTPQEDYVEAAV 728
Query: 407 DTAIKIHESMPVGDILAFVIGLEQIEHIIGILKQYHNQREDLKLL-ILPMHGSLPNNEQI 465
++++H S GDIL F+ G E IE + ++ + E+ L +LP++ LP++ Q
Sbjct: 729 KQSLQVHLSGAPGDILIFMPGQEDIEVTSDQIVEHLEELENAPALAVLPIYSQLPSDLQA 788
Query: 466 KVFRPTPRAMRKIVIATNIAETSITIPGIVYVIDPGFVKARWFNPNTLTNSLVVVPISK 524
K+F+ P +RK ++ATNIAETS+T+ GI++VID G+ K + FNP ++L + PIS+
Sbjct: 789 KIFQKAPDGVRKCIVATNIAETSLTVDGIMFVIDSGYCKLKVFNPRIGMDALQIYPISQ 847
Score = 286 (105.7 bits), Expect = 5.0e-34, Sum P(2) = 5.0e-34
Identities = 57/108 (52%), Positives = 80/108 (74%)
Query: 587 QYLLEAGWCYDTKLIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTK 646
QYL E G+ D +IG T+PRR++ S+A RVSEE+ LG VGY IRF+DCT+E+ T
Sbjct: 567 QYLHEDGYT-DYGMIGCTQPRRVAAMSVAKRVSEEMGGNLGEEVGYAIRFEDCTSEN-TL 624
Query: 647 IKYMTEGILMREMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKIL 694
IKYMT+GIL+RE + + L YS I++DE HER++ TD+L GLL++++
Sbjct: 625 IKYMTDGILLRESLREADLDHYSAIIMDEAHERSLNTDVLFGLLREVV 672
Score = 202 (76.2 bits), Expect = 4.3e-29, Sum P(3) = 4.3e-29
Identities = 47/109 (43%), Positives = 71/109 (65%)
Query: 46 RLYTEASF-SQLNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRVALEL 104
RLYT++++ ++L T PE+QRT L++ VL LK+LG+ ++L+F F PPP N+ ++
Sbjct: 867 RLYTQSAYKNELLTTTVPEIQRTNLANVVLLLKSLGVQDLLQFHFMDPPPEDNMLNSMYQ 926
Query: 105 LYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLLSSGSVLDSAVEILL 153
L+ LGA+D G LT G M E PL P +K+L+ S + S+ EILL
Sbjct: 927 LWILGALDNTGGLTS-TGRLMVEFPLDPALSKMLIVSCDMGCSS-EILL 973
Score = 176 (67.0 bits), Expect = 3.2e-43, Sum P(3) = 3.2e-43
Identities = 40/147 (27%), Positives = 75/147 (51%)
Query: 700 DFECSDEIASILSLLQVQDIFIKPSSGALSLKARVLRRNFEVEQGDLLTLLNIFKFYEKQ 759
D CS EI I+S+L V IF +P ++ +R F V + D LT LN++ ++
Sbjct: 964 DMGCSSEILLIVSMLSVPAIFYRPKGR--EEESDQIREKFAVPESDHLTYLNVYLQWKNN 1021
Query: 760 ENKKQFCHKYFFNYKVLKRAAELKNQMILLLKKSSIPLVTSPRNTNAVLKCLTNGFFSNA 819
+C+ +F + K +++ E++ Q+ ++ + + L + + + V KC+ +F A
Sbjct: 1022 NYSTIWCNDHFIHAKAMRKVREVRAQLKDIMVQQRMSLASCGTDWDIVRKCICAAYFHQA 1081
Query: 820 AYLHYSGVYRTVRGNEDLYIHPSSVLY 846
A L G Y +R ++HP+S L+
Sbjct: 1082 AKLKGIGEYVNIRTGMPCHLHPTSSLF 1108
Score = 89 (36.4 bits), Expect = 3.2e-43, Sum P(3) = 3.2e-43
Identities = 16/43 (37%), Positives = 28/43 (65%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILMECSRK 43
MT+GIL+ + ++ YS I++D+ HER++ TD+L R+
Sbjct: 628 MTDGILLRESLREADLDHYSAIIMDEAHERSLNTDVLFGLLRE 670
Score = 42 (19.8 bits), Expect = 2.7e-29, Sum P(3) = 2.7e-29
Identities = 18/56 (32%), Positives = 25/56 (44%)
Query: 653 GILMREMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKIL-KDKERDFECSDEI 707
G LM E DP L K ++ D I + M + I + K R+ E SD+I
Sbjct: 943 GRLMVEFPLDPALSKMLIVSCDMGCSSEILLIVSMLSVPAIFYRPKGREEE-SDQI 997
Score = 42 (19.8 bits), Expect = 3.2e-08, Sum P(2) = 3.2e-08
Identities = 7/19 (36%), Positives = 14/19 (73%)
Query: 434 IIGILKQYHNQREDLKLLI 452
+ G+L++ +R DLKL++
Sbjct: 664 LFGLLREVVARRSDLKLIV 682
>CGD|CAL0005059 [details] [associations]
symbol:orf19.2818 species:5476 "Candida albicans" [GO:0071007
"U2-type catalytic step 2 spliceosome" evidence=IEA] [GO:0000386
"second spliceosomal transesterification activity" evidence=IEA]
[GO:0008186 "RNA-dependent ATPase activity" evidence=IEA]
[GO:0000350 "generation of catalytic spliceosome for second
transesterification step" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 CGD:CAL0005059
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:AACQ01000080 EMBL:AACQ01000079 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K12815
RefSeq:XP_715749.1 RefSeq:XP_715799.1 STRING:Q5A227 GeneID:3642531
GeneID:3642595 KEGG:cal:CaO19.10336 KEGG:cal:CaO19.2818
Uniprot:Q5A227
Length = 1070
Score = 299 (110.3 bits), Expect = 3.4e-43, Sum P(3) = 3.4e-43
Identities = 71/186 (38%), Positives = 108/186 (58%)
Query: 347 KRTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYYSNDPVVNYVQGVV 406
KR LKLI++SAT++A +F+ ++ + + G +PV V+++ D ++YV+ V
Sbjct: 508 KRKDLKLIVTSATMNANRFTKFFGVAPQFH-----IPGRTFPVEVFFNRDVNMDYVEMAV 562
Query: 407 DTAIKIH--------ESMPVGDILAFVIGLEQIEHIIGILKQYHNQREDLKLL-ILPMHG 457
+ IH + GDIL F+ G E IE ++K+ N ED L I P++
Sbjct: 563 KQVLTIHLGRWNADNNNANDGDILVFMTGQEDIEITCDLIKEKLNLLEDPPPLDIFPIYS 622
Query: 458 SLPNNEQIKVFRPTPRAMRKIVIATNIAETSITIPGIVYVIDPGFVKARWFNPNTLTNSL 517
++P + Q K+F T RK+V+ATNIAETS+T+ GI YVID G VK + +NP ++L
Sbjct: 623 TMPQDLQKKIFNKTNLQRRKVVVATNIAETSLTVDGIKYVIDCGLVKVKVYNPKLGMDTL 682
Query: 518 VVVPIS 523
VVPIS
Sbjct: 683 QVVPIS 688
Score = 288 (106.4 bits), Expect = 2.1e-21, P = 2.1e-21
Identities = 55/106 (51%), Positives = 77/106 (72%)
Query: 597 DTKLIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTKIKYMTEGILM 656
+ ++I T+PRR++ S+A RVSEE+ LG VGY+IRF+D T T IKYMTEGIL+
Sbjct: 409 EKRIIACTQPRRVAAMSVAKRVSEEMNCKLGEEVGYSIRFEDKTDNKKTVIKYMTEGILL 468
Query: 657 REMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKILKDKERDFE 702
RE++ DP+L YS I++DE HER++ TDIL+GL K +L K +D +
Sbjct: 469 REILADPMLANYSCIIMDEAHERSLNTDILLGLFKNLLA-KRKDLK 513
Score = 199 (75.1 bits), Expect = 3.4e-43, Sum P(3) = 3.4e-43
Identities = 56/183 (30%), Positives = 96/183 (52%)
Query: 677 HERTIFTDILMGLLKKILKDKERDFECSDEIASILSLLQVQDIFIKPSSGALSLKARVLR 736
H T F I L K IL + +F CS+E+ +I+++L V +IF +P A +A + R
Sbjct: 787 HSMTQFP-IEPTLAKLILLSTQPEFHCSEEVVTIVAMLSVPNIFNRPKERAN--EADMAR 843
Query: 737 RNFEVEQGDLLTLLNIFKFYEKQENK--------KQFCHKYFFNYKVLKRAAELKNQMIL 788
F + + D LTLLN+F + NK +C+K F K L RA ++K+Q++L
Sbjct: 844 EKFIISESDHLTLLNVFNQWNINLNKFKGNYTKINNWCNKNFLQLKSLYRAKDIKHQLML 903
Query: 789 LLKKSSIPLVTSPRNTNAVLKCLTNGFFSNAAYL---HYSGVYRTVRGNED---LYIHPS 842
++KK+ + ++ S + + + KCL F+ +A L + +G V +++HP+
Sbjct: 904 IMKKNKLAILKS-KTDDDIRKCLCASFYQQSAKLTKMNLNGQPEFVNLRHSYMKMFLHPT 962
Query: 843 SVL 845
S L
Sbjct: 963 SSL 965
Score = 164 (62.8 bits), Expect = 1.4e-28, Sum P(3) = 1.4e-28
Identities = 41/98 (41%), Positives = 61/98 (62%)
Query: 46 RLYTE-ASFSQLNECTP-PEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRVALE 103
RLYTE A+ P PE+QR+ LS+ +L LK+L +++I F F PPP L +L
Sbjct: 709 RLYTEKATEPDSMYVQPIPEIQRSNLSNIMLLLKSLKVNDINSFPFLDPPPKDLLNCSLY 768
Query: 104 LLYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLLSS 141
L+++GA+D G LTK +G +M + P+ P AK++L S
Sbjct: 769 DLWAIGALDNLGELTK-LGHSMTQFPIEPTLAKLILLS 805
Score = 97 (39.2 bits), Expect = 3.4e-43, Sum P(3) = 3.4e-43
Identities = 19/38 (50%), Positives = 27/38 (71%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILM 38
MTEGIL+ DP + YS I++D+ HER++ TDIL+
Sbjct: 462 MTEGILLREILADPMLANYSCIIMDEAHERSLNTDILL 499
Score = 44 (20.5 bits), Expect = 3.1e-16, Sum P(3) = 3.1e-16
Identities = 11/40 (27%), Positives = 21/40 (52%)
Query: 434 IIGILKQYHNQREDLKLLILPMHGSLPNNEQIKVFRPTPR 473
++G+ K +R+DLKL++ ++ N K F P+
Sbjct: 498 LLGLFKNLLAKRKDLKLIVTS--ATMNANRFTKFFGVAPQ 535
>UNIPROTKB|E2RC56 [details] [associations]
symbol:DHX38 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 KO:K12815 OMA:PSRSTWE CTD:9785
EMBL:AAEX03004090 RefSeq:XP_536800.2 ProteinModelPortal:E2RC56
Ensembl:ENSCAFT00000032225 GeneID:479669 KEGG:cfa:479669
NextBio:20854813 Uniprot:E2RC56
Length = 1226
Score = 331 (121.6 bits), Expect = 4.0e-43, Sum P(3) = 4.0e-43
Identities = 68/179 (37%), Positives = 111/179 (62%)
Query: 347 KRTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYYSNDPVVNYVQGVV 406
+R+ LKLI++SAT+DAE+ F+ N I + G +PV + +S P +YV+ V
Sbjct: 673 RRSDLKLIVTSATMDAEKFAAFFG-----NVPIFHIPGRTFPVDILFSKTPQEDYVEAAV 727
Query: 407 DTAIKIHESMPVGDILAFVIGLEQIEHIIGILKQYHNQREDLKLL-ILPMHGSLPNNEQI 465
++++H S GDIL F+ G E IE + ++ + E+ L +LP++ LP++ Q
Sbjct: 728 KQSLQVHLSGAPGDILIFMPGQEDIEVTSDQIVEHLEELENAPALAVLPIYSQLPSDLQA 787
Query: 466 KVFRPTPRAMRKIVIATNIAETSITIPGIVYVIDPGFVKARWFNPNTLTNSLVVVPISK 524
K+F+ P +RK ++ATNIAETS+T+ GI++VID G+ K + FNP ++L + PIS+
Sbjct: 788 KIFQKAPDGVRKCIVATNIAETSLTVDGIMFVIDSGYCKLKVFNPRIGMDALQIYPISQ 846
Score = 285 (105.4 bits), Expect = 6.4e-34, Sum P(2) = 6.4e-34
Identities = 56/108 (51%), Positives = 80/108 (74%)
Query: 587 QYLLEAGWCYDTKLIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTK 646
QYL E G+ D +IG T+PRR++ S+A RVSEE+ LG VGY IRF+DCT+E+ T
Sbjct: 566 QYLHEDGYT-DYGMIGCTQPRRVAAMSVAKRVSEEMGGNLGEEVGYAIRFEDCTSEN-TL 623
Query: 647 IKYMTEGILMREMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKIL 694
IKYMT+GIL+RE + + L YS +++DE HER++ TD+L GLL++++
Sbjct: 624 IKYMTDGILLRESLREADLDHYSAVIMDEAHERSLNTDVLFGLLREVV 671
Score = 202 (76.2 bits), Expect = 5.4e-29, Sum P(3) = 5.4e-29
Identities = 47/109 (43%), Positives = 71/109 (65%)
Query: 46 RLYTEASF-SQLNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRVALEL 104
RLYT++++ ++L T PE+QRT L++ VL LK+LG+ ++L+F F PPP N+ ++
Sbjct: 866 RLYTQSAYKNELLTTTVPEIQRTNLANVVLLLKSLGVQDLLQFHFMDPPPEDNMLNSMYQ 925
Query: 105 LYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLLSSGSVLDSAVEILL 153
L+ LGA+D G LT G M E PL P +K+L+ S + S+ EILL
Sbjct: 926 LWILGALDNTGGLTS-TGRLMVEFPLDPALSKMLIVSCDMGCSS-EILL 972
Score = 176 (67.0 bits), Expect = 4.0e-43, Sum P(3) = 4.0e-43
Identities = 40/147 (27%), Positives = 75/147 (51%)
Query: 700 DFECSDEIASILSLLQVQDIFIKPSSGALSLKARVLRRNFEVEQGDLLTLLNIFKFYEKQ 759
D CS EI I+S+L V IF +P ++ +R F V + D LT LN++ ++
Sbjct: 963 DMGCSSEILLIVSMLSVPAIFYRPKGR--EEESDQIREKFAVPESDHLTYLNVYLQWKNN 1020
Query: 760 ENKKQFCHKYFFNYKVLKRAAELKNQMILLLKKSSIPLVTSPRNTNAVLKCLTNGFFSNA 819
+C+ +F + K +++ E++ Q+ ++ + + L + + + V KC+ +F A
Sbjct: 1021 NYSTIWCNDHFIHAKAMRKVREVRAQLKDIMVQQRMSLASCGTDWDIVRKCICAAYFHQA 1080
Query: 820 AYLHYSGVYRTVRGNEDLYIHPSSVLY 846
A L G Y +R ++HP+S L+
Sbjct: 1081 AKLKGIGEYVNIRTGMPCHLHPTSSLF 1107
Score = 88 (36.0 bits), Expect = 4.0e-43, Sum P(3) = 4.0e-43
Identities = 15/43 (34%), Positives = 28/43 (65%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILMECSRK 43
MT+GIL+ + ++ YS +++D+ HER++ TD+L R+
Sbjct: 627 MTDGILLRESLREADLDHYSAVIMDEAHERSLNTDVLFGLLRE 669
Score = 42 (19.8 bits), Expect = 3.4e-29, Sum P(3) = 3.4e-29
Identities = 18/56 (32%), Positives = 25/56 (44%)
Query: 653 GILMREMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKIL-KDKERDFECSDEI 707
G LM E DP L K ++ D I + M + I + K R+ E SD+I
Sbjct: 942 GRLMVEFPLDPALSKMLIVSCDMGCSSEILLIVSMLSVPAIFYRPKGREEE-SDQI 996
Score = 42 (19.8 bits), Expect = 3.2e-08, Sum P(2) = 3.2e-08
Identities = 7/19 (36%), Positives = 14/19 (73%)
Query: 434 IIGILKQYHNQREDLKLLI 452
+ G+L++ +R DLKL++
Sbjct: 663 LFGLLREVVARRSDLKLIV 681
>UNIPROTKB|Q17R09 [details] [associations]
symbol:DHX38 "Pre-mRNA-splicing factor ATP-dependent RNA
helicase PRP16" species:9913 "Bos taurus" [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008380 GO:GO:0006397
GO:GO:0005681 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 HOVERGEN:HBG039428 KO:K12815
EMBL:BC118085 IPI:IPI00690755 RefSeq:NP_001069266.1
UniGene:Bt.42896 ProteinModelPortal:Q17R09 STRING:Q17R09
PRIDE:Q17R09 GeneID:520046 KEGG:bta:520046 CTD:9785
NextBio:20873012 Uniprot:Q17R09
Length = 1227
Score = 332 (121.9 bits), Expect = 6.4e-43, Sum P(3) = 6.4e-43
Identities = 68/179 (37%), Positives = 111/179 (62%)
Query: 347 KRTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYYSNDPVVNYVQGVV 406
+R+ LKLI++SAT+DAE+ F+ N I + G +PV + +S P +YV+ V
Sbjct: 674 RRSDLKLIVTSATMDAEKFASFFG-----NVPIFHIPGRTFPVDILFSKTPQEDYVEAAV 728
Query: 407 DTAIKIHESMPVGDILAFVIGLEQIEHIIGILKQYHNQREDLKLL-ILPMHGSLPNNEQI 465
++++H S GDIL F+ G E IE + ++ + E+ L +LP++ LP++ Q
Sbjct: 729 KQSLQVHLSGAPGDILIFMPGQEDIEVTSDQIVEHLEELENAPALAVLPIYSQLPSDLQA 788
Query: 466 KVFRPTPRAMRKIVIATNIAETSITIPGIVYVIDPGFVKARWFNPNTLTNSLVVVPISK 524
K+F+ P +RK ++ATNIAETS+T+ GI++VID G+ K + FNP ++L + PIS+
Sbjct: 789 KIFQKAPDGVRKCIVATNIAETSLTVDGIMFVIDSGYCKLKVFNPRIGMDALQIYPISQ 847
Score = 285 (105.4 bits), Expect = 2.5e-32, Sum P(3) = 2.5e-32
Identities = 57/108 (52%), Positives = 79/108 (73%)
Query: 587 QYLLEAGWCYDTKLIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTK 646
QYL E G+ D +IG T+PRR++ S+A RVSEE+ LG VGY IRF+DCT+E T
Sbjct: 567 QYLHEDGYT-DYGMIGCTQPRRVAAMSVAKRVSEEMGGNLGEEVGYAIRFEDCTSES-TL 624
Query: 647 IKYMTEGILMREMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKIL 694
IKYMT+GIL+RE + + L YS I++DE HER++ TD+L GLL++++
Sbjct: 625 IKYMTDGILLRESLREADLDHYSAIIMDEAHERSLNTDVLFGLLREVV 672
Score = 202 (76.2 bits), Expect = 1.1e-28, Sum P(3) = 1.1e-28
Identities = 47/109 (43%), Positives = 71/109 (65%)
Query: 46 RLYTEASF-SQLNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRVALEL 104
RLYT++++ ++L T PE+QRT L++ VL LK+LG+ ++L+F F PPP N+ ++
Sbjct: 867 RLYTQSAYKNELLTTTVPEIQRTNLANVVLLLKSLGVQDLLQFHFMDPPPEDNMLNSMYQ 926
Query: 105 LYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLLSSGSVLDSAVEILL 153
L+ LGA+D G LT G M E PL P +K+L+ S + S+ EILL
Sbjct: 927 LWILGALDNTGGLTS-TGRLMVEFPLDPALSKMLIVSCDMGCSS-EILL 973
Score = 172 (65.6 bits), Expect = 6.4e-43, Sum P(3) = 6.4e-43
Identities = 39/147 (26%), Positives = 75/147 (51%)
Query: 700 DFECSDEIASILSLLQVQDIFIKPSSGALSLKARVLRRNFEVEQGDLLTLLNIFKFYEKQ 759
D CS EI I+S+L V IF +P ++ +R F V + D L+ LN++ ++
Sbjct: 964 DMGCSSEILLIVSMLSVPAIFYRPKGR--EEESDQIREKFAVPESDHLSYLNVYLQWKNN 1021
Query: 760 ENKKQFCHKYFFNYKVLKRAAELKNQMILLLKKSSIPLVTSPRNTNAVLKCLTNGFFSNA 819
+C+ +F + K +++ E++ Q+ ++ + + L + + + V KC+ +F A
Sbjct: 1022 NYSTIWCNDHFIHAKAMRKVREVRAQLKDIMVQQRMSLASCGTDWDIVRKCICAAYFHQA 1081
Query: 820 AYLHYSGVYRTVRGNEDLYIHPSSVLY 846
A L G Y +R ++HP+S L+
Sbjct: 1082 AKLKGIGEYVNIRTGMPCHLHPTSSLF 1108
Score = 89 (36.4 bits), Expect = 6.4e-43, Sum P(3) = 6.4e-43
Identities = 16/43 (37%), Positives = 28/43 (65%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILMECSRK 43
MT+GIL+ + ++ YS I++D+ HER++ TD+L R+
Sbjct: 628 MTDGILLRESLREADLDHYSAIIMDEAHERSLNTDVLFGLLRE 670
Score = 42 (19.8 bits), Expect = 2.0e-29, Sum P(3) = 2.0e-29
Identities = 18/56 (32%), Positives = 25/56 (44%)
Query: 653 GILMREMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKIL-KDKERDFECSDEI 707
G LM E DP L K ++ D I + M + I + K R+ E SD+I
Sbjct: 943 GRLMVEFPLDPALSKMLIVSCDMGCSSEILLIVSMLSVPAIFYRPKGREEE-SDQI 997
Score = 42 (19.8 bits), Expect = 6.9e-07, Sum P(3) = 6.9e-07
Identities = 7/19 (36%), Positives = 14/19 (73%)
Query: 434 IIGILKQYHNQREDLKLLI 452
+ G+L++ +R DLKL++
Sbjct: 664 LFGLLREVVARRSDLKLIV 682
Score = 37 (18.1 bits), Expect = 1.6e-37, Sum P(3) = 1.6e-37
Identities = 10/20 (50%), Positives = 12/20 (60%)
Query: 146 DSAVEILLHRLRGLCDNVDS 165
DS + LHRL G +VDS
Sbjct: 3 DSGEDASLHRLEGT--DVDS 20
>RGD|1310345 [details] [associations]
symbol:Dhx38 "DEAH (Asp-Glu-Ala-His) box polypeptide 38"
species:10116 "Rattus norvegicus" [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISO] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA;ISO] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 RGD:1310345
GO:GO:0005524 GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00700000104421 OrthoDB:EOG4Z62MS
IPI:IPI00371467 PRIDE:D4A321 Ensembl:ENSRNOT00000019810
UCSC:RGD:1310345 Uniprot:D4A321
Length = 1228
Score = 328 (120.5 bits), Expect = 6.8e-43, Sum P(3) = 6.8e-43
Identities = 67/179 (37%), Positives = 111/179 (62%)
Query: 347 KRTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYYSNDPVVNYVQGVV 406
+R+ LKLI++SAT+DA++ F+ N I + G +PV + +S P +YV+ V
Sbjct: 675 RRSDLKLIVTSATMDADKFAAFFG-----NVPIFHIPGRTFPVDILFSKTPQEDYVEAAV 729
Query: 407 DTAIKIHESMPVGDILAFVIGLEQIEHIIGILKQYHNQREDLKLL-ILPMHGSLPNNEQI 465
++++H S GDIL F+ G E IE + ++ + E+ L +LP++ LP++ Q
Sbjct: 730 KQSLQVHLSGAPGDILIFMPGQEDIEVTSDQIVEHLEELENAPALAVLPIYSQLPSDLQA 789
Query: 466 KVFRPTPRAMRKIVIATNIAETSITIPGIVYVIDPGFVKARWFNPNTLTNSLVVVPISK 524
K+F+ P +RK ++ATNIAETS+T+ GI++VID G+ K + FNP ++L + PIS+
Sbjct: 790 KIFQKAPDGVRKCIVATNIAETSLTVDGIMFVIDSGYCKLKVFNPRIGMDALQIYPISQ 848
Score = 283 (104.7 bits), Expect = 1.1e-33, Sum P(2) = 1.1e-33
Identities = 56/108 (51%), Positives = 80/108 (74%)
Query: 587 QYLLEAGWCYDTKLIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTK 646
QYL + G+ D +IG T+PRR++ S+A RVSEE+ LG VGY IRF+DCT+E+ T
Sbjct: 568 QYLHQDGYT-DYGMIGCTQPRRVAAMSVAKRVSEEMGGNLGEEVGYAIRFEDCTSEN-TL 625
Query: 647 IKYMTEGILMREMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKIL 694
IKYMT+GIL+RE + + L YS I++DE HER++ TD+L GLL++++
Sbjct: 626 IKYMTDGILLRESLREADLDHYSAIIMDEAHERSLNTDVLFGLLREVV 673
Score = 202 (76.2 bits), Expect = 4.3e-29, Sum P(3) = 4.3e-29
Identities = 47/109 (43%), Positives = 71/109 (65%)
Query: 46 RLYTEASF-SQLNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRVALEL 104
RLYT++++ ++L T PE+QRT L++ VL LK+LG+ ++L+F F PPP N+ ++
Sbjct: 868 RLYTQSAYKNELLTTTVPEIQRTNLANVVLLLKSLGVQDLLQFHFMDPPPEDNMLNSMYQ 927
Query: 105 LYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLLSSGSVLDSAVEILL 153
L+ LGA+D G LT G M E PL P +K+L+ S + S+ EILL
Sbjct: 928 LWILGALDNTGGLTS-TGRLMVEFPLDPALSKMLIVSCDMGCSS-EILL 974
Score = 176 (67.0 bits), Expect = 6.8e-43, Sum P(3) = 6.8e-43
Identities = 40/147 (27%), Positives = 75/147 (51%)
Query: 700 DFECSDEIASILSLLQVQDIFIKPSSGALSLKARVLRRNFEVEQGDLLTLLNIFKFYEKQ 759
D CS EI I+S+L V IF +P ++ +R F V + D LT LN++ ++
Sbjct: 965 DMGCSSEILLIVSMLSVPAIFYRPKGR--EEESDQIREKFAVPESDHLTYLNVYLQWKNN 1022
Query: 760 ENKKQFCHKYFFNYKVLKRAAELKNQMILLLKKSSIPLVTSPRNTNAVLKCLTNGFFSNA 819
+C+ +F + K +++ E++ Q+ ++ + + L + + + V KC+ +F A
Sbjct: 1023 NYSTIWCNDHFIHAKAMRKVREVRAQLKDIMVQQRMSLASCGTDWDIVRKCICAAYFHQA 1082
Query: 820 AYLHYSGVYRTVRGNEDLYIHPSSVLY 846
A L G Y +R ++HP+S L+
Sbjct: 1083 AKLKGIGEYVNIRTGMPCHLHPTSSLF 1109
Score = 89 (36.4 bits), Expect = 6.8e-43, Sum P(3) = 6.8e-43
Identities = 16/43 (37%), Positives = 28/43 (65%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILMECSRK 43
MT+GIL+ + ++ YS I++D+ HER++ TD+L R+
Sbjct: 629 MTDGILLRESLREADLDHYSAIIMDEAHERSLNTDVLFGLLRE 671
Score = 42 (19.8 bits), Expect = 5.7e-29, Sum P(3) = 5.7e-29
Identities = 18/56 (32%), Positives = 25/56 (44%)
Query: 653 GILMREMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKIL-KDKERDFECSDEI 707
G LM E DP L K ++ D I + M + I + K R+ E SD+I
Sbjct: 944 GRLMVEFPLDPALSKMLIVSCDMGCSSEILLIVSMLSVPAIFYRPKGREEE-SDQI 998
Score = 42 (19.8 bits), Expect = 3.2e-08, Sum P(2) = 3.2e-08
Identities = 7/19 (36%), Positives = 14/19 (73%)
Query: 434 IIGILKQYHNQREDLKLLI 452
+ G+L++ +R DLKL++
Sbjct: 665 LFGLLREVVARRSDLKLIV 683
>FB|FBgn0032194 [details] [associations]
symbol:CG4901 species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0000390 "spliceosomal complex disassembly" evidence=ISS]
[GO:0005681 "spliceosomal complex" evidence=ISS] [GO:0004386
"helicase activity" evidence=ISS] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0022008 "neurogenesis" evidence=IMP] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:AE014134 GO:GO:0022008 GO:GO:0006200 GO:GO:0003676
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 OMA:APDYFRR EMBL:AY113491
RefSeq:NP_609356.2 UniGene:Dm.10854 SMR:Q9VL25 MINT:MINT-898830
STRING:Q9VL25 EnsemblMetazoa:FBtr0079947 GeneID:34357
KEGG:dme:Dmel_CG4901 UCSC:CG4901-RA FlyBase:FBgn0032194
InParanoid:Q9VL25 OrthoDB:EOG4MW6N5 GenomeRNAi:34357 NextBio:788096
Uniprot:Q9VL25
Length = 694
Score = 296 (109.3 bits), Expect = 4.8e-41, Sum P(2) = 4.8e-41
Identities = 56/113 (49%), Positives = 86/113 (76%)
Query: 587 QYLLEAGWCYDTKLIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTK 646
Q+LL AG+ + +IGIT+PRR++ ++A RV++EL T+G TVGYT+RF+D T+ TK
Sbjct: 103 QFLLLAGYAKNG-MIGITQPRRVAAITVARRVAQELNGTIGDTVGYTVRFEDVTSR-ATK 160
Query: 647 IKYMTEGILMREMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKILKDKER 699
I+++T+G+L+RE + D LL KYSVI+LDE HERT+ D+L G++K K++ +
Sbjct: 161 IRFLTDGVLLRESIKDRLLLKYSVIILDEAHERTVNADLLFGIVKDAQKERRK 213
Score = 267 (99.0 bits), Expect = 3.1e-42, Sum P(4) = 3.1e-42
Identities = 66/198 (33%), Positives = 109/198 (55%)
Query: 330 DVIGEDMKAFAEQLKPLKRTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPV 389
D++ +K ++ + K LK++++SAT+D + ++N + ++G YPV
Sbjct: 198 DLLFGIVKDAQKERRKQKLANLKVVVTSATMDIDHFGNYFNCKG------MYLEGRTYPV 251
Query: 390 SVYYSNDPVVNYVQGVVDTAIKIHESMPVG-DILAFVIGLEQIEHIIGILKQYH--NQRE 446
V ++ + +Y+ V+ T IH + P D+L F+ G E+IE + ++Q +
Sbjct: 252 RVMHTKEEHEDYIHTVLVTLFHIHRTTPKNHDVLIFLTGQEEIESLAQQIRQLAKIDTTG 311
Query: 447 DLKLLILPMHGSLPNNEQIKVFRPTPRAMRKIVIATNIAETSITIPGIVYVIDPGFVKAR 506
L + ++ L +Q++ F PTP +RK+++ATNIAETSITIPGI VID GFVK +
Sbjct: 312 TTDLRVFTLYAQLSQGKQLECFVPTPANVRKVILATNIAETSITIPGIRCVIDCGFVKEK 371
Query: 507 WFNPNTLTNSLVVVPISK 524
FN + L V ISK
Sbjct: 372 SFNTVDGLDVLKSVRISK 389
Score = 224 (83.9 bits), Expect = 3.1e-42, Sum P(4) = 3.1e-42
Identities = 52/151 (34%), Positives = 80/151 (52%)
Query: 701 FECSDEIASILSLLQVQDIFIKPSSGALSLKARVLRRNFEVEQGDLLTLLNIFKFYEKQE 760
F C +EI S++S+L +F+ S+ + A + F+ + GD LTLLN+F + K E
Sbjct: 507 FGCMEEILSLVSVLSSDHVFV--SNSEKNEMAALAHAKFQSKHGDHLTLLNVFNGFLKSE 564
Query: 761 NKKQFCHKYFFNYKVLKRAAELKNQMILLLKKSSIPLVTSPRNTNAVLKCLTNGFFSNAA 820
K +CH + N + L A ++ Q+ + + + L +S + + KC+ NGFF N A
Sbjct: 565 KPKMWCHDNYLNLRSLTYARNVRRQLREISEHLHLALNSSD-DIEMLKKCILNGFFENIA 623
Query: 821 YLHYSGVYRTVRGNEDLYIHPSSVLYTLQQP 851
L G Y T GN IHPSSVL+ +P
Sbjct: 624 VLQRDGFYITASGNIRSKIHPSSVLHGKYKP 654
Score = 150 (57.9 bits), Expect = 4.3e-30, Sum P(3) = 4.3e-30
Identities = 38/99 (38%), Positives = 55/99 (55%)
Query: 46 RLYTEASFSQLNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRVALELL 105
R YT+A + T PE+ RT +S VLQL AL I + F F PP LR A + L
Sbjct: 409 RAYTKAEMDSFADATQPEILRTNPTSMVLQLLALDI-DCNNFDFLDPPLEDGLRSAYKSL 467
Query: 106 YSLGAMDV-NGNLTKPVGETMAEMPLHPIHAKVLLSSGS 143
+LGA+ + + P+G M + PL P ++K+LL++ S
Sbjct: 468 DALGAIKTGDDSYITPLGRQMVQYPLDPKYSKLLLTASS 506
Score = 91 (37.1 bits), Expect = 3.1e-42, Sum P(4) = 3.1e-42
Identities = 17/37 (45%), Positives = 26/37 (70%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDIL 37
+T+G+L+ D + KYSVI+LD+ HERT+ D+L
Sbjct: 164 LTDGVLLRESIKDRLLLKYSVIILDEAHERTVNADLL 200
Score = 38 (18.4 bits), Expect = 3.1e-42, Sum P(4) = 3.1e-42
Identities = 11/25 (44%), Positives = 16/25 (64%)
Query: 649 YMTEGILMREMMTDPLLRKYSVIML 673
Y+T L R+M+ PL KYS ++L
Sbjct: 480 YITP--LGRQMVQYPLDPKYSKLLL 502
>DICTYBASE|DDB_G0270110 [details] [associations]
symbol:dhx33 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
dictyBase:DDB_G0270110 GO:GO:0005524 EMBL:AAFI02000005
GenomeReviews:CM000150_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K14781 RefSeq:XP_646548.1
EnsemblProtists:DDB0233404 GeneID:8617514 KEGG:ddi:DDB_G0270110
InParanoid:Q55CD3 OMA:EICINRE Uniprot:Q55CD3
Length = 730
Score = 327 (120.2 bits), Expect = 8.2e-32, Sum P(2) = 8.2e-32
Identities = 110/412 (26%), Positives = 190/412 (46%)
Query: 347 KRTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYYSNDPVVNYVQGVV 406
K+ LK+II SAT+DAE Q++N NA +L ++G +PV +YY+ + +YV +
Sbjct: 218 KKNPLKIIIMSATLDAELFSQYFN-----NAPVLYIEGRQFPVQIYYTEEIQKDYVDAAL 272
Query: 407 DTAIKIH------------ESMPVGDILAFVIGLEQIEHIIGILKQYHNQRE--DLKLLI 452
T ++IH E GDIL F+ G ++IE++ +L + L++
Sbjct: 273 ITVLQIHIAHLTDKSINKEEEEDGGDILVFLTGRDEIENLEKLLLDRIPRLPVGSKDLIV 332
Query: 453 LPMHGSLPNNEQIKVFRPTPRAMRKIVIATNIAETSITIPGIVYVIDPGFVKARWFNPNT 512
P+ +LP +Q+KVF P+ RK+++ATNIAETS+TI GI YV+D G VK++ FNP
Sbjct: 333 CPIFSALPQEQQMKVFEKAPKGSRKVILATNIAETSLTINGIRYVVDSGAVKSKIFNPKI 392
Query: 513 LTNSLVVVPISKXXXXXXXXXXXXXXXXHVYRKNFMYNRLFIHFCVSRNIP-----TIPN 567
+SL ++PISK YR +Y + + +IP I N
Sbjct: 393 GIDSLNIIPISKASAKQRTGRAGREFEGKCYR---LYTQETFEKLDTSSIPEIKRSNIAN 449
Query: 568 DPKDVKCDVMFHKVFFSFFQYLLEAGWCYDTKLIGITEP--RRISVTSLANRVSE-ELRT 624
+K + + F F + A +L+ + S+T L +++ L
Sbjct: 450 VILQLKTIGINDILSFDFLESPPVASVIKSLELLFCLDAISDNGSLTELGKKMALFPLDP 509
Query: 625 TLGHTVGYTIRFDDCTTEDVTKIKYMT-EGILMREMMTDPLLRKYSVIMLDEVHERTIFT 683
T+ +I F+ C+ E + I ++ E I + I + F
Sbjct: 510 MYSKTLIKSIEFE-CSEEVLIIISILSVESIFFTPKEKKKEVEDVKKIFFSPDGDHITFL 568
Query: 684 DILMGLLKKILKDKERDFECSDEIASILSLLQVQDIFIKPSSGALSLKARVL 735
++ K K +++ C D ++ S+++V ++F + +SLK ++
Sbjct: 569 NVFREFQKS--KPQQQQQWCFDHFINLKSMIKVLNVFEQLVKYCISLKLPIV 618
Score = 310 (114.2 bits), Expect = 4.4e-42, Sum P(2) = 4.4e-42
Identities = 63/113 (55%), Positives = 82/113 (72%)
Query: 587 QYLLEAGWCYDTKLIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTK 646
QYL E G+ D +I IT+PRR++ S++ RVS+E+ LG VGY +RFDD T E TK
Sbjct: 108 QYLYENGY-KDNGIIAITQPRRVAAVSISKRVSQEMGVELGDQVGYCVRFDDKTNEK-TK 165
Query: 647 IKYMTEGILMREMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKILKDKER 699
+KYMT+G+L+RE M D L KYSVI+LDE HERT+ TD+L GLLK I K +E+
Sbjct: 166 LKYMTDGMLVREAMLDSSLSKYSVIILDEAHERTLNTDVLFGLLKSIQKRREK 218
Score = 220 (82.5 bits), Expect = 4.4e-42, Sum P(2) = 4.4e-42
Identities = 47/158 (29%), Positives = 87/158 (55%)
Query: 697 KERDFECSDEIASILSLLQVQDIFIKPSSGALSLKARVLRRNFEVEQGDLLTLLNIFKFY 756
K +FECS+E+ I+S+L V+ IF P ++ +++ F GD +T LN+F+ +
Sbjct: 517 KSIEFECSEEVLIIISILSVESIFFTPKEKKKEVED--VKKIFFSPDGDHITFLNVFREF 574
Query: 757 EKQ--ENKKQFCHKYFFNYKVLKRAAELKNQMILLLKKSSIPLVTSPRNTNAVLKCLTNG 814
+K + ++Q+C +F N K + + + Q++ +P+V+ + + + K G
Sbjct: 575 QKSKPQQQQQWCFDHFINLKSMIKVLNVFEQLVKYCISLKLPIVSCGSDFDRIKKSFIGG 634
Query: 815 FFSNAAYLHYSGVYRTVRGNEDLYIHPSSVLYTLQQPQ 852
FF N A L Y+T+ N+++ IHP+S L+ Q+PQ
Sbjct: 635 FFLNTAILQPDKKYKTMVDNKEIQIHPTSFLFD-QKPQ 671
Score = 207 (77.9 bits), Expect = 8.9e-31, Sum P(2) = 8.9e-31
Identities = 46/138 (33%), Positives = 84/138 (60%)
Query: 16 VEKYSVIMLDKVHERTIFTDILMECSRKFSRLYTEASFSQLNECTPPEMQRTELSSAVLQ 75
++ ++I + K + E K RLYT+ +F +L+ + PE++R+ +++ +LQ
Sbjct: 394 IDSLNIIPISKASAKQRTGRAGREFEGKCYRLYTQETFEKLDTSSIPEIKRSNIANVILQ 453
Query: 76 LKALGIHNILRFSFPSPPPAQNLRVALELLYSLGAMDVNGNLTKPVGETMAEMPLHPIHA 135
LK +GI++IL F F PP ++ +LELL+ L A+ NG+LT+ +G+ MA PL P+++
Sbjct: 454 LKTIGINDILSFDFLESPPVASVIKSLELLFCLDAISDNGSLTE-LGKKMALFPLDPMYS 512
Query: 136 KVLLSSGSVLDSAVEILL 153
K L+ S + + E+L+
Sbjct: 513 KTLIKSIE-FECSEEVLI 529
Score = 104 (41.7 bits), Expect = 8.2e-32, Sum P(2) = 8.2e-32
Identities = 20/37 (54%), Positives = 28/37 (75%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDIL 37
MT+G+L+ D S+ KYSVI+LD+ HERT+ TD+L
Sbjct: 169 MTDGMLVREAMLDSSLSKYSVIILDEAHERTLNTDVL 205
>ASPGD|ASPL0000001852 [details] [associations]
symbol:AN6085 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005730
"nucleolus" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 EMBL:BN001301 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 OMA:PGQEEID EnsemblFungi:CADANIAT00006930
Uniprot:C8V2M2
Length = 824
Score = 287 (106.1 bits), Expect = 9.0e-41, Sum P(3) = 9.0e-41
Identities = 66/189 (34%), Positives = 101/189 (53%)
Query: 351 LKLIISSATVDAEEICQFY------------NISASSNATILSVKGHLYPVSVYYSNDPV 398
LK ++ SAT D E + +F+ S + +KG +PV YS +PV
Sbjct: 322 LKAVVMSATADMESLQEFFVEGYKARELQKEEKSEKDGIAVCHIKGRQFPVKTIYSPEPV 381
Query: 399 VNYVQGVVDTAIKIHESMPV-GDILAFVIGLEQIEHIIGILKQYHNQREDL--KLLILPM 455
++V + +IH P+ GDIL F+ G E +E + ++ +Y + K+ +LP+
Sbjct: 382 HDFVDAALKVIFQIHYKEPIPGDILVFLTGQETVEALENLVNEYATGMDPSLPKIQVLPL 441
Query: 456 HGSLPNNEQIKVFRPTPRAMRKIVIATNIAETSITIPGIVYVIDPGFVKARWFNPNTLTN 515
+LP Q +VF P P RKI++ATNIAETS+T+ G+ YV+D G K + F +
Sbjct: 442 FAALPQAAQQRVFVPAPPRTRKIILATNIAETSVTVSGVRYVVDCGKAKIKQFRTRLGLD 501
Query: 516 SLVVVPISK 524
SL+V PISK
Sbjct: 502 SLLVKPISK 510
Score = 245 (91.3 bits), Expect = 2.0e-29, Sum P(4) = 2.0e-29
Identities = 48/102 (47%), Positives = 73/102 (71%)
Query: 601 IGITEPRRISVTSLANRVSEELRTTLGHT-----VGYTIRFDDCTTEDVTKIKYMTEGIL 655
I IT+PRR++ SLA RV+EE+ T LG + VGY++RFD + T++K++TEG+L
Sbjct: 213 IAITQPRRVAAISLARRVAEEMGTPLGSSSPASKVGYSVRFDTSVSPS-TRVKFLTEGML 271
Query: 656 MREMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKILKDK 697
++EM+ DP L KYS I++DEVHER + D++MG L+ ++ K
Sbjct: 272 LQEMLHDPWLTKYSAIVVDEVHERGVNVDLVMGFLRNLVSGK 313
Score = 180 (68.4 bits), Expect = 6.2e-29, Sum P(3) = 6.2e-29
Identities = 38/96 (39%), Positives = 60/96 (62%)
Query: 46 RLYTEASFSQLNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRVALELL 105
RLYTE + L+E PE+ R +LS A+L +KA G+ N++ F F + PP + L AL L
Sbjct: 530 RLYTEKDYLALDEVNTPEILRCDLSQAILNMKARGVDNVIEFPFLTRPPREALEKALLQL 589
Query: 106 YSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLLSS 141
S+ A+D G +++ G +A++PL P +VLL++
Sbjct: 590 LSIEALDETGKISE-TGSHIAKLPLTPTLGRVLLAA 624
Score = 179 (68.1 bits), Expect = 9.0e-41, Sum P(3) = 9.0e-41
Identities = 45/161 (27%), Positives = 85/161 (52%)
Query: 700 DF--ECSDEIASILSLLQVQDIFIKPSSGALSLKARVLRRNFEVEQGDLLTLLNIFKFYE 757
DF +C ++ I+S L V++IF+ +S A RR+ +GD LT+L + Y
Sbjct: 626 DFGPDCLTDVIDIISCLSVENIFLNTTSEEKKEAAEAARRDLYRREGDHLTMLATVRAYA 685
Query: 758 KQE-NKKQFCHKYFFNYKVLKRAAELKNQMILLLKKSSI-PLVTSPRNTNA--------- 806
+ ++K + ++ +++ ++ +++ Q+ +++ + P T R++++
Sbjct: 686 SENTDRKAWAERHLVSHRAMQSVMDVRKQLTAQCRQAKLLPSPTESRDSDSSSIREPSPV 745
Query: 807 -VLKCLTNGFFSNAAYLHYSGVYRTVRGNEDLYIHPSSVLY 846
+LK GF +N A L G YRTV GN+ + IHPSSVL+
Sbjct: 746 FILKSFLRGFATNTARLVPDGSYRTVVGNQTVAIHPSSVLF 786
Score = 101 (40.6 bits), Expect = 9.0e-41, Sum P(3) = 9.0e-41
Identities = 18/38 (47%), Positives = 29/38 (76%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILM 38
+TEG+L++ HDP + KYS I++D+VHER + D++M
Sbjct: 266 LTEGMLLQEMLHDPWLTKYSAIVVDEVHERGVNVDLVM 303
Score = 42 (19.8 bits), Expect = 2.0e-29, Sum P(4) = 2.0e-29
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 587 QYLLEAGWCYDTKLIGITE 605
Q+L++ WC TK + E
Sbjct: 182 QFLVDESWCRPTKTTIVQE 200
Score = 37 (18.1 bits), Expect = 4.0e-34, Sum P(3) = 4.0e-34
Identities = 8/16 (50%), Positives = 9/16 (56%)
Query: 332 IGEDMKAFAEQLKPLK 347
+ ED EQ KPLK
Sbjct: 10 VDEDAAPIVEQGKPLK 25
>UNIPROTKB|F1MVJ1 [details] [associations]
symbol:DHX38 "Pre-mRNA-splicing factor ATP-dependent RNA
helicase PRP16" species:9913 "Bos taurus" [GO:0071013 "catalytic
step 2 spliceosome" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00700000104421 OMA:PSRSTWE
IPI:IPI00690755 EMBL:DAAA02046748 EMBL:DAAA02046749
Ensembl:ENSBTAT00000045480 ArrayExpress:F1MVJ1 Uniprot:F1MVJ1
Length = 1226
Score = 312 (114.9 bits), Expect = 1.0e-40, Sum P(3) = 1.0e-40
Identities = 65/179 (36%), Positives = 109/179 (60%)
Query: 347 KRTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYYSNDPVVNYVQGVV 406
+R+ LKLI++SAT+DAE+ F+ N I + G +PV + +S P +YV+ V
Sbjct: 674 RRSDLKLIVTSATMDAEKFASFFG-----NVPIFHIPGRTFPVDILFSKTPQEDYVEAAV 728
Query: 407 DTAIKIHESMPVGDILAFVIGLEQIEHIIGILKQYHNQREDLKLL-ILPMHGSLPNNEQI 465
++++H S GDIL F+ G E IE + ++ + E+ L +LP++ LP++ Q
Sbjct: 729 KQSLQVHLSGAPGDILIFMPGQEDIEVTSDQIVEHLEELENAPALAVLPIYSQLPSDLQA 788
Query: 466 KVFRPTPRAMRKIVIATNIAETSITIPGIVYVIDPGFVKARWFNPNTLTNSLVVVPISK 524
K+F+ P +RK ++ATNIAETS+T+ GI++VID G+ K + +P+ + L ++ I K
Sbjct: 789 KIFQKAPDGVRKCIVATNIAETSLTVDGIMFVIDSGYCKLKVSSPSLGGSDLKIMEIQK 847
Score = 285 (105.4 bits), Expect = 2.5e-32, Sum P(3) = 2.5e-32
Identities = 57/108 (52%), Positives = 79/108 (73%)
Query: 587 QYLLEAGWCYDTKLIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTK 646
QYL E G+ D +IG T+PRR++ S+A RVSEE+ LG VGY IRF+DCT+E T
Sbjct: 567 QYLHEDGYT-DYGMIGCTQPRRVAAMSVAKRVSEEMGGNLGEEVGYAIRFEDCTSES-TL 624
Query: 647 IKYMTEGILMREMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKIL 694
IKYMT+GIL+RE + + L YS I++DE HER++ TD+L GLL++++
Sbjct: 625 IKYMTDGILLRESLREADLDHYSAIIMDEAHERSLNTDVLFGLLREVV 672
Score = 204 (76.9 bits), Expect = 1.0e-24, Sum P(2) = 1.0e-24
Identities = 51/134 (38%), Positives = 82/134 (61%)
Query: 21 VIMLDKVHERTIFTDILMECSRKFSRLYTEASF-SQLNECTPPEMQRTELSSAVLQLKAL 79
++ + K+ ++ I T S + RLYT++++ ++L T PE+QRT L++ VL LK+L
Sbjct: 842 IMEIQKI-QKNINTGCSGCTSPRCCRLYTQSAYKNELLTTTVPEIQRTNLANVVLLLKSL 900
Query: 80 GIHNILRFSFPSPPPAQNLRVALELLYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLL 139
G+ ++L+F F PPP N+ ++ L+ LGA+D G LT G M E PL P +K+L+
Sbjct: 901 GVQDLLQFHFMDPPPEDNMLNSMYQLWILGALDNTGGLTS-TGRLMVEFPLDPALSKMLI 959
Query: 140 SSGSVLDSAVEILL 153
S + S+ EILL
Sbjct: 960 VSCDMGCSS-EILL 972
Score = 172 (65.6 bits), Expect = 1.0e-40, Sum P(3) = 1.0e-40
Identities = 39/147 (26%), Positives = 75/147 (51%)
Query: 700 DFECSDEIASILSLLQVQDIFIKPSSGALSLKARVLRRNFEVEQGDLLTLLNIFKFYEKQ 759
D CS EI I+S+L V IF +P ++ +R F V + D L+ LN++ ++
Sbjct: 963 DMGCSSEILLIVSMLSVPAIFYRPKGR--EEESDQIREKFAVPESDHLSYLNVYLQWKNN 1020
Query: 760 ENKKQFCHKYFFNYKVLKRAAELKNQMILLLKKSSIPLVTSPRNTNAVLKCLTNGFFSNA 819
+C+ +F + K +++ E++ Q+ ++ + + L + + + V KC+ +F A
Sbjct: 1021 NYSTIWCNDHFIHAKAMRKVREVRAQLKDIMVQQRMSLASCGTDWDIVRKCICAAYFHQA 1080
Query: 820 AYLHYSGVYRTVRGNEDLYIHPSSVLY 846
A L G Y +R ++HP+S L+
Sbjct: 1081 AKLKGIGEYVNIRTGMPCHLHPTSSLF 1107
Score = 89 (36.4 bits), Expect = 1.0e-40, Sum P(3) = 1.0e-40
Identities = 16/43 (37%), Positives = 28/43 (65%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILMECSRK 43
MT+GIL+ + ++ YS I++D+ HER++ TD+L R+
Sbjct: 628 MTDGILLRESLREADLDHYSAIIMDEAHERSLNTDVLFGLLRE 670
Score = 42 (19.8 bits), Expect = 3.2e-27, Sum P(3) = 3.2e-27
Identities = 18/56 (32%), Positives = 25/56 (44%)
Query: 653 GILMREMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKIL-KDKERDFECSDEI 707
G LM E DP L K ++ D I + M + I + K R+ E SD+I
Sbjct: 942 GRLMVEFPLDPALSKMLIVSCDMGCSSEILLIVSMLSVPAIFYRPKGREEE-SDQI 996
Score = 42 (19.8 bits), Expect = 6.9e-07, Sum P(3) = 6.9e-07
Identities = 7/19 (36%), Positives = 14/19 (73%)
Query: 434 IIGILKQYHNQREDLKLLI 452
+ G+L++ +R DLKL++
Sbjct: 664 LFGLLREVVARRSDLKLIV 682
Score = 37 (18.1 bits), Expect = 2.7e-35, Sum P(3) = 2.7e-35
Identities = 10/20 (50%), Positives = 12/20 (60%)
Query: 146 DSAVEILLHRLRGLCDNVDS 165
DS + LHRL G +VDS
Sbjct: 3 DSGEDASLHRLEGT--DVDS 20
>SGD|S000005294 [details] [associations]
symbol:PRP2 "RNA-dependent ATPase in the DEAH-box family"
species:4932 "Saccharomyces cerevisiae" [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0008186 "RNA-dependent ATPase
activity" evidence=IDA] [GO:0071006 "U2-type catalytic step 1
spliceosome" evidence=IMP;IDA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0000349 "generation of catalytic spliceosome for
first transesterification step" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 SGD:S000005294
GO:GO:0005524 GO:GO:0005634 EMBL:BK006947 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:X77395
GO:GO:0000349 eggNOG:COG1643 GeneTree:ENSGT00700000104393
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
OrthoDB:EOG4SBJ63 GO:GO:0008186 EMBL:X55936 EMBL:X55999 EMBL:Z71626
PIR:S12334 RefSeq:NP_014408.1 ProteinModelPortal:P20095 SMR:P20095
DIP:DIP-3961N IntAct:P20095 MINT:MINT-496813 STRING:P20095
PaxDb:P20095 EnsemblFungi:YNR011C GeneID:855745 KEGG:sce:YNR011C
CYGD:YNR011c KO:K12814 OMA:DDKIHIN NextBio:980148
Genevestigator:P20095 GermOnline:YNR011C Uniprot:P20095
Length = 876
Score = 367 (134.2 bits), Expect = 2.3e-40, Sum P(3) = 2.3e-40
Identities = 77/182 (42%), Positives = 118/182 (64%)
Query: 347 KRTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYYSNDPVVNYVQGVV 406
+R LKL+ISSAT++A++ +F++ N I +V G YPV ++Y+ P NY+ +
Sbjct: 368 QRPTLKLLISSATMNAKKFSEFFD-----NCPIFNVPGRRYPVDIHYTLQPEANYIHAAI 422
Query: 407 DTAIKIH--ESMPVGDILAFVIGLEQIEHIIGILKQYHNQ--REDLKLLILPMHGSLPNN 462
T +IH +S+P GDIL F+ G E+IE L++ ++ +++I P++ +LP
Sbjct: 423 TTIFQIHTTQSLP-GDILVFLTGQEEIERTKTKLEEIMSKLGSRTKQMIITPIYANLPQE 481
Query: 463 EQIKVFRPTPRAMRKIVIATNIAETSITIPGIVYVIDPGFVKARWFNPNTLTNSLVVVPI 522
+Q+K+F+PTP RK+V+ATNIAETS+TI GI YVIDPGFVK + P+T L+ VP
Sbjct: 482 QQLKIFQPTPENCRKVVLATNIAETSLTIDGIRYVIDPGFVKENSYVPSTGMTQLLTVPC 541
Query: 523 SK 524
S+
Sbjct: 542 SR 543
Score = 312 (114.9 bits), Expect = 1.2e-28, Sum P(2) = 1.2e-28
Identities = 63/112 (56%), Positives = 83/112 (74%)
Query: 587 QYLLEAGWCYDTKL-IGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVT 645
QYL+E G+ KL I IT+PRR++ TS+A RV++E+ LG VGY IRF+D TT + T
Sbjct: 258 QYLVEDGFTDQGKLQIAITQPRRVAATSVAARVADEMNVVLGKEVGYQIRFEDKTTPNKT 317
Query: 646 KIKYMTEGILMREMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKILKDK 697
+KYMT+G+L+RE +TD L KYS IM+DE HERT+ TDIL+GLLK IL +
Sbjct: 318 VLKYMTDGMLLREFLTDSKLSKYSCIMIDEAHERTLATDILIGLLKDILPQR 369
Score = 167 (63.8 bits), Expect = 3.0e-18, Sum P(3) = 3.0e-18
Identities = 39/102 (38%), Positives = 61/102 (59%)
Query: 43 KFSRLYTEASFSQLNECTP-PEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRVA 101
K R++T+ S+ E P PE+ RT LS+ VL L +LG+ ++++F P LR +
Sbjct: 560 KCFRIFTKWSYLHELELMPKPEITRTNLSNTVLLLLSLGVTDLIKFPLMDKPSIPTLRKS 619
Query: 102 LELLYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLLSSGS 143
LE LY LGA++ G +T+ +G+ M E P P AKVL ++ +
Sbjct: 620 LENLYILGALNSKGTITR-LGKMMCEFPCEPEFAKVLYTAAT 660
Score = 98 (39.6 bits), Expect = 2.3e-40, Sum P(3) = 2.3e-40
Identities = 19/38 (50%), Positives = 27/38 (71%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILM 38
MT+G+L+ D + KYS IM+D+ HERT+ TDIL+
Sbjct: 322 MTDGMLLREFLTDSKLSKYSCIMIDEAHERTLATDILI 359
Score = 93 (37.8 bits), Expect = 2.3e-40, Sum P(3) = 2.3e-40
Identities = 39/156 (25%), Positives = 74/156 (47%)
Query: 705 DEIASILSLL-QVQDIFIKPSSGALSLKARVLRRNFEVEQGDLLTLLNIFKFYEKQENKK 763
+E +I+S+L + +FI A A VL EVE +L L IF + + +
Sbjct: 669 EECLTIVSMLHETPSLFIGQKRDAA---ASVLS---EVESDHIL-YLEIFNQWRNSKFSR 721
Query: 764 QFCHKYFFNYKVLKRAAELKNQM------ILLLKKSS---IPLVTSPRNTNA-VLKCLTN 813
+C + +K + R ++NQ+ + L++K+ + + NA + +C +
Sbjct: 722 SWCQDHKIQFKTMLRVRNIRNQLFRCSEKVGLVEKNDQARMKIGNIAGYINARITRCFIS 781
Query: 814 GFFSNAAYLHYSGVYRTV---RGNEDLYIHPSSVLY 846
GF N L +G Y+T+ G ++ +HP+S+L+
Sbjct: 782 GFPMNIVQLGPTG-YQTMGRSSGGLNVSVHPTSILF 816
Score = 46 (21.3 bits), Expect = 1.2e-05, Sum P(3) = 1.2e-05
Identities = 11/19 (57%), Positives = 13/19 (68%)
Query: 434 IIGILKQYHNQREDLKLLI 452
+IG+LK QR LKLLI
Sbjct: 358 LIGLLKDILPQRPTLKLLI 376
Score = 41 (19.5 bits), Expect = 5.9e-35, Sum P(3) = 5.9e-35
Identities = 12/53 (22%), Positives = 26/53 (49%)
Query: 571 DVKCD-VMFHKVFFSFFQYLLEAGWCYDTKLIGITEPRRISVTSLANRVSEEL 622
+V+ D +++ ++F + WC D K+ T R ++ + R SE++
Sbjct: 699 EVESDHILYLEIFNQWRNSKFSRSWCQDHKIQFKTMLRVRNIRNQLFRCSEKV 751
>UNIPROTKB|E1C094 [details] [associations]
symbol:E1C094 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 EMBL:AADN02054197 EMBL:AADN02054196
IPI:IPI00591998 Ensembl:ENSGALT00000001141 Uniprot:E1C094
Length = 1164
Score = 297 (109.6 bits), Expect = 4.3e-40, Sum P(3) = 4.3e-40
Identities = 60/161 (37%), Positives = 99/161 (61%)
Query: 347 KRTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYYSNDPVVNYVQGVV 406
+R+ LKL+++SAT+DA++ F+ N I + G +PV + +S P +YV+ V
Sbjct: 677 RRSDLKLVVTSATMDADKFASFFG-----NVPIFHIPGRTFPVDILFSKTPQEDYVEAAV 731
Query: 407 DTAIKIHESMPVGDILAFVIGLEQIEHIIGILKQYHNQREDLKLL-ILPMHGSLPNNEQI 465
A+++H S GDIL F+ G E IE + ++ + E L +LP++ LP++ Q
Sbjct: 732 KQALQVHLSGAPGDILVFMPGQEDIEVTSEQIVEHLEELEKAPALAVLPIYSQLPSDLQA 791
Query: 466 KVFRPTPRAMRKIVIATNIAETSITIPGIVYVIDPGFVKAR 506
K+F+ P +RK ++ATNIAETS+T+ GI++VID G+ K +
Sbjct: 792 KIFQKAPDGVRKCIVATNIAETSLTVDGIMFVIDSGYCKLK 832
Score = 287 (106.1 bits), Expect = 1.3e-34, Sum P(2) = 1.3e-34
Identities = 57/108 (52%), Positives = 80/108 (74%)
Query: 587 QYLLEAGWCYDTKLIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTK 646
QYL E G+ D +IG T+PRR++ S+A RVSEE+ LG VGY IRF+DCT+E+ T
Sbjct: 570 QYLHEDGYT-DYGMIGCTQPRRVAAMSVAKRVSEEMGVRLGEEVGYAIRFEDCTSEN-TI 627
Query: 647 IKYMTEGILMREMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKIL 694
IKYMT+GIL+RE + + L YS I++DE HER++ TD+L GLL++++
Sbjct: 628 IKYMTDGILLRESLREADLDNYSAIIMDEAHERSLNTDVLFGLLREVV 675
Score = 180 (68.4 bits), Expect = 4.3e-40, Sum P(3) = 4.3e-40
Identities = 42/147 (28%), Positives = 76/147 (51%)
Query: 700 DFECSDEIASILSLLQVQDIFIKPSSGALSLKARVLRRNFEVEQGDLLTLLNIFKFYEKQ 759
D CS EI I+S+L V IF +P G +V R F V + D LT LN++ ++
Sbjct: 901 DMGCSSEILLIVSMLSVPAIFYRPK-GREEESDQV-REKFAVPESDHLTYLNVYLQWKNN 958
Query: 760 ENKKQFCHKYFFNYKVLKRAAELKNQMILLLKKSSIPLVTSPRNTNAVLKCLTNGFFSNA 819
+C+++F + K +++ E++ Q+ ++ + + L + + + V KC+ +F A
Sbjct: 959 NYSTLWCNQHFIHAKAMRKVREVRAQLKDIMVQQRMSLASCGTDWDVVRKCICAAYFHQA 1018
Query: 820 AYLHYSGVYRTVRGNEDLYIHPSSVLY 846
A L G Y +R ++HP+S L+
Sbjct: 1019 AKLKGIGEYVNIRTGMPCHLHPTSSLF 1045
Score = 90 (36.7 bits), Expect = 4.3e-40, Sum P(3) = 4.3e-40
Identities = 16/43 (37%), Positives = 28/43 (65%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILMECSRK 43
MT+GIL+ + ++ YS I++D+ HER++ TD+L R+
Sbjct: 631 MTDGILLRESLREADLDNYSAIIMDEAHERSLNTDVLFGLLRE 673
Score = 47 (21.6 bits), Expect = 1.2e-13, Sum P(3) = 1.2e-13
Identities = 14/32 (43%), Positives = 19/32 (59%)
Query: 122 GETMAEMPLHPIHAKVLLSSGSVLDSAVEILL 153
G M E PL P +K+L+ S + S+ EILL
Sbjct: 880 GRQMVEFPLDPALSKMLIVSCDMGCSS-EILL 910
Score = 41 (19.5 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 7/19 (36%), Positives = 14/19 (73%)
Query: 434 IIGILKQYHNQREDLKLLI 452
+ G+L++ +R DLKL++
Sbjct: 667 LFGLLREVVARRSDLKLVV 685
>UNIPROTKB|F1NY80 [details] [associations]
symbol:F1NY80 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0071013 "catalytic step
2 spliceosome" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GeneTree:ENSGT00700000104421 OMA:PSRSTWE
EMBL:AADN02054197 EMBL:AADN02054196 IPI:IPI00821409
Ensembl:ENSGALT00000038723 Uniprot:F1NY80
Length = 1170
Score = 297 (109.6 bits), Expect = 4.4e-40, Sum P(3) = 4.4e-40
Identities = 60/161 (37%), Positives = 99/161 (61%)
Query: 347 KRTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYYSNDPVVNYVQGVV 406
+R+ LKL+++SAT+DA++ F+ N I + G +PV + +S P +YV+ V
Sbjct: 680 RRSDLKLVVTSATMDADKFASFFG-----NVPIFHIPGRTFPVDILFSKTPQEDYVEAAV 734
Query: 407 DTAIKIHESMPVGDILAFVIGLEQIEHIIGILKQYHNQREDLKLL-ILPMHGSLPNNEQI 465
A+++H S GDIL F+ G E IE + ++ + E L +LP++ LP++ Q
Sbjct: 735 KQALQVHLSGAPGDILVFMPGQEDIEVTSEQIVEHLEELEKAPALAVLPIYSQLPSDLQA 794
Query: 466 KVFRPTPRAMRKIVIATNIAETSITIPGIVYVIDPGFVKAR 506
K+F+ P +RK ++ATNIAETS+T+ GI++VID G+ K +
Sbjct: 795 KIFQKAPDGVRKCIVATNIAETSLTVDGIMFVIDSGYCKLK 835
Score = 287 (106.1 bits), Expect = 1.3e-34, Sum P(2) = 1.3e-34
Identities = 57/108 (52%), Positives = 80/108 (74%)
Query: 587 QYLLEAGWCYDTKLIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTK 646
QYL E G+ D +IG T+PRR++ S+A RVSEE+ LG VGY IRF+DCT+E+ T
Sbjct: 573 QYLHEDGYT-DYGMIGCTQPRRVAAMSVAKRVSEEMGVRLGEEVGYAIRFEDCTSEN-TI 630
Query: 647 IKYMTEGILMREMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKIL 694
IKYMT+GIL+RE + + L YS I++DE HER++ TD+L GLL++++
Sbjct: 631 IKYMTDGILLRESLREADLDNYSAIIMDEAHERSLNTDVLFGLLREVV 678
Score = 180 (68.4 bits), Expect = 4.4e-40, Sum P(3) = 4.4e-40
Identities = 42/147 (28%), Positives = 76/147 (51%)
Query: 700 DFECSDEIASILSLLQVQDIFIKPSSGALSLKARVLRRNFEVEQGDLLTLLNIFKFYEKQ 759
D CS EI I+S+L V IF +P G +V R F V + D LT LN++ ++
Sbjct: 907 DMGCSSEILLIVSMLSVPAIFYRPK-GREEESDQV-REKFAVPESDHLTYLNVYLQWKNN 964
Query: 760 ENKKQFCHKYFFNYKVLKRAAELKNQMILLLKKSSIPLVTSPRNTNAVLKCLTNGFFSNA 819
+C+++F + K +++ E++ Q+ ++ + + L + + + V KC+ +F A
Sbjct: 965 NYSTLWCNQHFIHAKAMRKVREVRAQLKDIMVQQRMSLASCGTDWDVVRKCICAAYFHQA 1024
Query: 820 AYLHYSGVYRTVRGNEDLYIHPSSVLY 846
A L G Y +R ++HP+S L+
Sbjct: 1025 AKLKGIGEYVNIRTGMPCHLHPTSSLF 1051
Score = 90 (36.7 bits), Expect = 4.4e-40, Sum P(3) = 4.4e-40
Identities = 16/43 (37%), Positives = 28/43 (65%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILMECSRK 43
MT+GIL+ + ++ YS I++D+ HER++ TD+L R+
Sbjct: 634 MTDGILLRESLREADLDNYSAIIMDEAHERSLNTDVLFGLLRE 676
Score = 65 (27.9 bits), Expect = 1.8e-15, Sum P(3) = 1.8e-15
Identities = 28/88 (31%), Positives = 42/88 (47%)
Query: 66 RTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRVALELLYSLGAMDVNGNLTKPVGETM 125
+ ++S L + ++ F + S P L+ AL L +S G G LT G M
Sbjct: 833 KLKVSKGFLYCSWISGTGLIEF-YGSEPAFHWLQSALLLPFS-GGFIPPGGLTS-TGRQM 889
Query: 126 AEMPLHPIHAKVLLSSGSVLDSAVEILL 153
E PL P +K+L+ S + S+ EILL
Sbjct: 890 VEFPLDPALSKMLIVSCDMGCSS-EILL 916
Score = 41 (19.5 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 7/19 (36%), Positives = 14/19 (73%)
Query: 434 IIGILKQYHNQREDLKLLI 452
+ G+L++ +R DLKL++
Sbjct: 670 LFGLLREVVARRSDLKLVV 688
>GENEDB_PFALCIPARUM|MAL13P1.322 [details] [associations]
symbol:MAL13P1.322 "splicing factor,
putative" species:5833 "Plasmodium falciparum" [GO:0000398 "mRNA
splicing, via spliceosome" evidence=ISS] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISS] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0000398 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
EMBL:AL844509 HOGENOM:HOG000175261 KO:K12815 RefSeq:XP_002809102.1
ProteinModelPortal:C0H5K5 EnsemblProtists:MAL13P1.322:mRNA
GeneID:813888 KEGG:pfa:MAL13P1.322 EuPathDB:PlasmoDB:PF3D7_1364300
OMA:YFHNAAK ProtClustDB:CLSZ2500787 Uniprot:C0H5K5
Length = 1151
Score = 287 (106.1 bits), Expect = 2.6e-38, Sum P(2) = 2.6e-38
Identities = 58/107 (54%), Positives = 80/107 (74%)
Query: 587 QYLLEAGWCYDTKLIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTK 646
QYL E G+ + +I T+PRR++ S+A RVS E+ +G VGYTIRF+D TT+D TK
Sbjct: 514 QYLYEEGY-HRNGIICCTQPRRVAAVSVAYRVSYEMNVDIGSLVGYTIRFEDNTTKD-TK 571
Query: 647 IKYMTEGILMREMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKI 693
I+Y+T+GIL+RE + D L KYSVI++DE HER+I TD+L+G+LK I
Sbjct: 572 IRYVTDGILLRETLNDKELDKYSVIIMDEAHERSINTDVLLGILKNI 618
Score = 215 (80.7 bits), Expect = 1.1e-39, Sum P(4) = 1.1e-39
Identities = 47/150 (31%), Positives = 81/150 (54%)
Query: 699 RDFECSDEIASILSLLQVQDIFIKPSSGALSLKARVLRRNFEVEQGDLLTLLNIFKFYEK 758
++F+C+ EI I+S+L IF++ S++++ + F V + D LTLLNI+ +
Sbjct: 960 QNFQCTKEILIIVSMLSSPSIFLESKENNESIESK--KEKFTVPESDHLTLLNIYLQWRS 1017
Query: 759 QENKKQFCHKYFFNYKVLKRAAELKNQMILLLKKSSIPLVTSPRNTNAVLKCLTNGFFSN 818
+C K F YK L +A E+ +Q+I ++K +I V+ + K + +G+F N
Sbjct: 1018 HNYSYSWCTKNFIQYKALNKAKEVYSQLIDIIKTLNIKNVSCDNKWELIRKTICSGYFHN 1077
Query: 819 AAYLHYSGVYRTVRGNEDLYIHPSSVLYTL 848
AA L Y +R N ++HP+S LY +
Sbjct: 1078 AAKLKSFSEYINLRTNVSCHVHPNSSLYNI 1107
Score = 164 (62.8 bits), Expect = 1.0e-30, Sum P(3) = 1.0e-30
Identities = 41/109 (37%), Positives = 64/109 (58%)
Query: 46 RLYTEASF-SQLNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRVALEL 104
RLYTE +F L + PE+QR+ LS+ VL LK+L + N+ F F P +++ +L
Sbjct: 864 RLYTENTFLCDLYQNNIPEIQRSNLSNVVLLLKSLHVQNLFEFDFIDVPSKESIINSLHE 923
Query: 105 LYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLLSSGSVLDSAVEILL 153
L+ LGA++ GNLT +G M + PL P +K+++ S + EIL+
Sbjct: 924 LWVLGAINNEGNLTD-IGRKMVQFPLDPPLSKIVIYSQN-FQCTKEILI 970
Score = 154 (59.3 bits), Expect = 1.1e-39, Sum P(4) = 1.1e-39
Identities = 39/115 (33%), Positives = 58/115 (50%)
Query: 452 ILPMHGSLPNNEQIKVFRPTPRAMRKIVIATNIAETSITIPGIVYVIDPGFVKARWFNPN 511
I P++ L + +Q K+F+ +RKI+++TNIAETS+T+ GI YVID G+ K + +N
Sbjct: 774 IFPIYSQLSSEQQSKIFKKYD--LRKIIVSTNIAETSLTLDGIKYVIDTGYCKLKVYNQT 831
Query: 512 TLTNSLVVVPISKXXXXXXXXXXXXXXXXHVYRKNFMYNR-LFIHFCVSRNIPTI 565
+ L V PIS+ YR +Y F+ NIP I
Sbjct: 832 IGMDVLQVTPISQANANQRSGRAGRTGAGICYR---LYTENTFLCDLYQNNIPEI 883
Score = 142 (55.0 bits), Expect = 1.1e-39, Sum P(4) = 1.1e-39
Identities = 38/110 (34%), Positives = 58/110 (52%)
Query: 346 LKRTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYYSNDPVVNYVQGV 405
LKR LKLI++SAT+DA++ F+ NA I +++G + V + Y P +Y++
Sbjct: 620 LKRNDLKLIVTSATIDAKKFSAFFG-----NAPIYNIQGRTFKVHIEYLRTPCNDYIECA 674
Query: 406 VDTAIKIHES-----MPVGDILAFVIGLEQIEHIIGILKQ-YHNQREDLK 449
V AI+IH S GDIL F+ G E I +L + ++ E K
Sbjct: 675 VQKAIQIHVSDNNYDNNFGDILIFMTGQEDINATCYLLSERFYEVYESYK 724
Score = 102 (41.0 bits), Expect = 1.1e-39, Sum P(4) = 1.1e-39
Identities = 18/38 (47%), Positives = 30/38 (78%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILM 38
+T+GIL+ +D ++KYSVI++D+ HER+I TD+L+
Sbjct: 575 VTDGILLRETLNDKELDKYSVIIMDEAHERSINTDVLL 612
Score = 50 (22.7 bits), Expect = 2.6e-24, Sum P(3) = 2.6e-24
Identities = 20/88 (22%), Positives = 38/88 (43%)
Query: 369 YNISASSNATILSVKGHLYPVSVYYSNDPVVNYV-QGVVDTAIKIHESMPVGDILAFVIG 427
Y +S N I S+ G+ + D + YV G++ + + ++
Sbjct: 542 YRVSYEMNVDIGSLVGYTIRFEDNTTKDTKIRYVTDGILLRETLNDKELDKYSVIIMDEA 601
Query: 428 LEQ---IEHIIGILKQYHNQREDLKLLI 452
E+ + ++GILK +R DLKL++
Sbjct: 602 HERSINTDVLLGILKNICLKRNDLKLIV 629
>UNIPROTKB|C0H5K5 [details] [associations]
symbol:MAL13P1.322 "Splicing factor, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0000398 "mRNA
splicing, via spliceosome" evidence=ISS] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISS] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0000398 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
EMBL:AL844509 HOGENOM:HOG000175261 KO:K12815 RefSeq:XP_002809102.1
ProteinModelPortal:C0H5K5 EnsemblProtists:MAL13P1.322:mRNA
GeneID:813888 KEGG:pfa:MAL13P1.322 EuPathDB:PlasmoDB:PF3D7_1364300
OMA:YFHNAAK ProtClustDB:CLSZ2500787 Uniprot:C0H5K5
Length = 1151
Score = 287 (106.1 bits), Expect = 2.6e-38, Sum P(2) = 2.6e-38
Identities = 58/107 (54%), Positives = 80/107 (74%)
Query: 587 QYLLEAGWCYDTKLIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTK 646
QYL E G+ + +I T+PRR++ S+A RVS E+ +G VGYTIRF+D TT+D TK
Sbjct: 514 QYLYEEGY-HRNGIICCTQPRRVAAVSVAYRVSYEMNVDIGSLVGYTIRFEDNTTKD-TK 571
Query: 647 IKYMTEGILMREMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKI 693
I+Y+T+GIL+RE + D L KYSVI++DE HER+I TD+L+G+LK I
Sbjct: 572 IRYVTDGILLRETLNDKELDKYSVIIMDEAHERSINTDVLLGILKNI 618
Score = 215 (80.7 bits), Expect = 1.1e-39, Sum P(4) = 1.1e-39
Identities = 47/150 (31%), Positives = 81/150 (54%)
Query: 699 RDFECSDEIASILSLLQVQDIFIKPSSGALSLKARVLRRNFEVEQGDLLTLLNIFKFYEK 758
++F+C+ EI I+S+L IF++ S++++ + F V + D LTLLNI+ +
Sbjct: 960 QNFQCTKEILIIVSMLSSPSIFLESKENNESIESK--KEKFTVPESDHLTLLNIYLQWRS 1017
Query: 759 QENKKQFCHKYFFNYKVLKRAAELKNQMILLLKKSSIPLVTSPRNTNAVLKCLTNGFFSN 818
+C K F YK L +A E+ +Q+I ++K +I V+ + K + +G+F N
Sbjct: 1018 HNYSYSWCTKNFIQYKALNKAKEVYSQLIDIIKTLNIKNVSCDNKWELIRKTICSGYFHN 1077
Query: 819 AAYLHYSGVYRTVRGNEDLYIHPSSVLYTL 848
AA L Y +R N ++HP+S LY +
Sbjct: 1078 AAKLKSFSEYINLRTNVSCHVHPNSSLYNI 1107
Score = 164 (62.8 bits), Expect = 1.0e-30, Sum P(3) = 1.0e-30
Identities = 41/109 (37%), Positives = 64/109 (58%)
Query: 46 RLYTEASF-SQLNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRVALEL 104
RLYTE +F L + PE+QR+ LS+ VL LK+L + N+ F F P +++ +L
Sbjct: 864 RLYTENTFLCDLYQNNIPEIQRSNLSNVVLLLKSLHVQNLFEFDFIDVPSKESIINSLHE 923
Query: 105 LYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLLSSGSVLDSAVEILL 153
L+ LGA++ GNLT +G M + PL P +K+++ S + EIL+
Sbjct: 924 LWVLGAINNEGNLTD-IGRKMVQFPLDPPLSKIVIYSQN-FQCTKEILI 970
Score = 154 (59.3 bits), Expect = 1.1e-39, Sum P(4) = 1.1e-39
Identities = 39/115 (33%), Positives = 58/115 (50%)
Query: 452 ILPMHGSLPNNEQIKVFRPTPRAMRKIVIATNIAETSITIPGIVYVIDPGFVKARWFNPN 511
I P++ L + +Q K+F+ +RKI+++TNIAETS+T+ GI YVID G+ K + +N
Sbjct: 774 IFPIYSQLSSEQQSKIFKKYD--LRKIIVSTNIAETSLTLDGIKYVIDTGYCKLKVYNQT 831
Query: 512 TLTNSLVVVPISKXXXXXXXXXXXXXXXXHVYRKNFMYNR-LFIHFCVSRNIPTI 565
+ L V PIS+ YR +Y F+ NIP I
Sbjct: 832 IGMDVLQVTPISQANANQRSGRAGRTGAGICYR---LYTENTFLCDLYQNNIPEI 883
Score = 142 (55.0 bits), Expect = 1.1e-39, Sum P(4) = 1.1e-39
Identities = 38/110 (34%), Positives = 58/110 (52%)
Query: 346 LKRTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYYSNDPVVNYVQGV 405
LKR LKLI++SAT+DA++ F+ NA I +++G + V + Y P +Y++
Sbjct: 620 LKRNDLKLIVTSATIDAKKFSAFFG-----NAPIYNIQGRTFKVHIEYLRTPCNDYIECA 674
Query: 406 VDTAIKIHES-----MPVGDILAFVIGLEQIEHIIGILKQ-YHNQREDLK 449
V AI+IH S GDIL F+ G E I +L + ++ E K
Sbjct: 675 VQKAIQIHVSDNNYDNNFGDILIFMTGQEDINATCYLLSERFYEVYESYK 724
Score = 102 (41.0 bits), Expect = 1.1e-39, Sum P(4) = 1.1e-39
Identities = 18/38 (47%), Positives = 30/38 (78%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILM 38
+T+GIL+ +D ++KYSVI++D+ HER+I TD+L+
Sbjct: 575 VTDGILLRETLNDKELDKYSVIIMDEAHERSINTDVLL 612
Score = 50 (22.7 bits), Expect = 2.6e-24, Sum P(3) = 2.6e-24
Identities = 20/88 (22%), Positives = 38/88 (43%)
Query: 369 YNISASSNATILSVKGHLYPVSVYYSNDPVVNYV-QGVVDTAIKIHESMPVGDILAFVIG 427
Y +S N I S+ G+ + D + YV G++ + + ++
Sbjct: 542 YRVSYEMNVDIGSLVGYTIRFEDNTTKDTKIRYVTDGILLRETLNDKELDKYSVIIMDEA 601
Query: 428 LEQ---IEHIIGILKQYHNQREDLKLLI 452
E+ + ++GILK +R DLKL++
Sbjct: 602 HERSINTDVLLGILKNICLKRNDLKLIV 629
>FB|FBgn0026873 [details] [associations]
symbol:MED18 "Mediator complex subunit 18" species:7227
"Drosophila melanogaster" [GO:0001104 "RNA polymerase II
transcription cofactor activity" evidence=IC;IMP] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0016592 "mediator complex" evidence=IDA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=IEA;IC] [GO:0005634 "nucleus" evidence=IDA]
InterPro:IPR019095 Pfam:PF09637 EMBL:AE014298 EMBL:AL021106
GO:GO:0016592 GO:GO:0001104 eggNOG:NOG262405 KO:K15135 CTD:54797
GeneTree:ENSGT00390000003312 OMA:VQLEKID EMBL:AY119167
EMBL:BT071807 PIR:T12679 RefSeq:NP_569948.3 UniGene:Dm.11084
ProteinModelPortal:Q9XZT1 DIP:DIP-17703N IntAct:Q9XZT1
MINT:MINT-280891 STRING:Q9XZT1 PaxDb:Q9XZT1 PRIDE:Q9XZT1
EnsemblMetazoa:FBtr0070308 GeneID:31140 KEGG:dme:Dmel_CG14802
FlyBase:FBgn0026873 InParanoid:Q9XZT1 OrthoDB:EOG431ZF1
PhylomeDB:Q9XZT1 GenomeRNAi:31140 NextBio:772108 Bgee:Q9XZT1
Uniprot:Q9XZT1
Length = 217
Score = 429 (156.1 bits), Expect = 2.0e-39, P = 2.0e-39
Identities = 89/147 (60%), Positives = 112/147 (76%)
Query: 209 QPEMG-PLLLRVRRALDFPDMPYQLRYIGQPEMGVGDKARPTIVRSSIDVACSCTVVEFL 267
QP PLLLRVRRAL D P+Q+RY+G PE+ D RPT+VRS +D AC+ ++EFL
Sbjct: 68 QPNANQPLLLRVRRALG-RDAPFQMRYLGNPEV---DLRRPTLVRSCMDCACTNGILEFL 123
Query: 268 TEMGCRMDFEYISRGYMFRKGRMKILVSKIFKMSQGKPSDSGVEPISQSYLVELSILAPG 327
TEMG R++FEYI++GYMFRKGRMKI VSK+ K+ GK D EPISQSY+VELS++AP
Sbjct: 124 TEMGFRLEFEYIAKGYMFRKGRMKITVSKLIKIVPGKQQDMANEPISQSYIVELSVVAPT 183
Query: 328 GQDVIGEDMKAFAEQLKPLKRTQLKLI 354
GQ+ +GE+M+ FAEQLKPL QL+ I
Sbjct: 184 GQENVGEEMRVFAEQLKPL--VQLEKI 208
Score = 250 (93.1 bits), Expect = 3.6e-20, P = 3.6e-20
Identities = 52/84 (61%), Positives = 63/84 (75%)
Query: 139 LSSGSVLDSAVEILLHRLRGLCDNVDSGPETFHDHEMCFSIRG-NQTQPLLLRVRRALDF 197
L GS+LDSAVE L+HRL+GLCDNVD+ PE FHD E+C S+R N QPLLLRVRRAL
Sbjct: 26 LLQGSILDSAVEHLMHRLKGLCDNVDTSPEPFHDLEVCMSLRQPNANQPLLLRVRRALG- 84
Query: 198 PDMPYQLRYIGQPEMG---PLLLR 218
D P+Q+RY+G PE+ P L+R
Sbjct: 85 RDAPFQMRYLGNPEVDLRRPTLVR 108
>UNIPROTKB|C9JR60 [details] [associations]
symbol:DHX40 "Probable ATP-dependent RNA helicase DHX40"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
RefSeq:NP_001159773.1 UniGene:Hs.29403 GeneID:79665 KEGG:hsa:79665
CTD:79665 HGNC:HGNC:18018 ChiTaRS:DHX40 OrthoDB:EOG48PMJH
EMBL:AC091271 EMBL:AC004167 IPI:IPI00952676
ProteinModelPortal:C9JR60 STRING:C9JR60 Ensembl:ENST00000425628
ArrayExpress:C9JR60 Uniprot:C9JR60
Length = 702
Score = 288 (106.4 bits), Expect = 1.0e-38, Sum P(3) = 1.0e-38
Identities = 82/252 (32%), Positives = 126/252 (50%)
Query: 330 DVIGEDMKAFAEQLKPLKRTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPV 389
D++ +K ++ P ++ LK+++ SAT++ ++ F+ N I + G LYPV
Sbjct: 106 DILFGLLKKLFQEKSPNRKEHLKVVVMSATMELAKLSAFFG-----NCPIFDIPGRLYPV 160
Query: 390 SVYYSN--DPV----VNYVQGVVDTAIKIHESMPVGDILAFVIGLEQIEHIIGILKQ--- 440
+ N P Y+Q +V + IH + GDIL F+ G +IE +L Q
Sbjct: 161 REKFCNLIGPRDRENTAYIQAIVKVTMDIHLNEMAGDILVFLTGQFEIEKSCELLFQMAE 220
Query: 441 ---YHNQREDLKL---LILPMHGSLPNNEQIKVFRPTPRAMRKIVIATNIAETSITIPGI 494
Y +D L LILP +GS+ ++Q ++F P P +RK VI+TNI+ TS+TI GI
Sbjct: 221 SVDYDYDVQDTTLDGLLILPCYGSMTTDQQRRIFLPPPPGIRKCVISTNISATSLTIDGI 280
Query: 495 VYVIDPGFVKARWFNPNTLTNSLVVVPISKXXXXXXXXXXXXXXXXHVYRKNFMYNRLFI 554
YV+D GFVK NP + L VVPISK +R +Y++ F
Sbjct: 281 RYVVDGGFVKQLNHNPRLGLDILEVVPISKSEALQRSGRAGRTSSGKCFR---IYSKDFW 337
Query: 555 HFCVSRN-IPTI 565
+ C+ + IP I
Sbjct: 338 NQCMPDHVIPEI 349
Score = 171 (65.3 bits), Expect = 2.6e-19, Sum P(2) = 2.6e-19
Identities = 32/53 (60%), Positives = 43/53 (81%)
Query: 645 TKIKYMTEGILMREMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKILKDK 697
T IKYMT+G L++ ++ DP L K+SVI+LDE HERT+ TDIL GLLKK+ ++K
Sbjct: 67 TAIKYMTDGCLLKHILGDPNLTKFSVIILDEAHERTLTTDILFGLLKKLFQEK 119
Score = 165 (63.1 bits), Expect = 5.3e-25, Sum P(3) = 5.3e-25
Identities = 43/117 (36%), Positives = 69/117 (58%)
Query: 41 SRKFSRLYTEASFSQLNECTP----PEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQ 96
S K R+Y++ + N+C P PE++RT L+S VL LK L IH+++RF + PP +
Sbjct: 325 SGKCFRIYSKDFW---NQCMPDHVIPEIKRTSLTSVVLTLKCLAIHDVIRFPYLDPPNER 381
Query: 97 NLRVALELLYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLLSSGSVLDSAVEILL 153
+ AL+ LY A+D +G++T+ +G +M E PL P H + + LD ++LL
Sbjct: 382 LILEALKQLYQCDAIDRSGHVTR-LGLSMVEFPLPP-HLTCAVIKAASLDCE-DLLL 435
Score = 148 (57.2 bits), Expect = 1.0e-38, Sum P(3) = 1.0e-38
Identities = 43/159 (27%), Positives = 74/159 (46%)
Query: 697 KERDFECSDEIASILSLLQVQDIFIKPSSGALSLKARVLRRNFEVEQG---DLLTLLNIF 753
K +C D + I ++L V+++FI+P +A R + G D TL IF
Sbjct: 424 KAASLDCEDLLLPIAAMLSVENVFIRPVDPEYQKEAEQRHRELAAKAGGFNDFATLAVIF 483
Query: 754 KFYEKQENKKQFCHKYFFNYKVLKRAAELKNQMILLLKK----SSIPLVTSPRNTNAVLK 809
+ + +C K++ +++ L A ++ Q+ L++K S P T + VL+
Sbjct: 484 EQCKSSGAPASWCQKHWIHWRCLFSAFRVEAQLRELIRKLKQQSDFPKETFEGPKHEVLR 543
Query: 810 -CLTNGFFSNAAYLHYSGVYRTVRGN-EDLYIHPSSVLY 846
CL G+F N A + T+ G ++IHPSS L+
Sbjct: 544 RCLCAGYFKNVARRSVGRTFCTMDGRGSPVHIHPSSALH 582
Score = 107 (42.7 bits), Expect = 1.0e-38, Sum P(3) = 1.0e-38
Identities = 24/52 (46%), Positives = 36/52 (69%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILMECSRKFSRLYTEAS 52
MT+G L+++ DP++ K+SVI+LD+ HERT+ TDIL +K L+ E S
Sbjct: 72 MTDGCLLKHILGDPNLTKFSVIILDEAHERTLTTDILFGLLKK---LFQEKS 120
>ZFIN|ZDB-GENE-080507-1 [details] [associations]
symbol:dhx40 "DEAH (Asp-Glu-Ala-His) box polypeptide
40" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
ZFIN:ZDB-GENE-080507-1 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GeneTree:ENSGT00700000104421
EMBL:CR848791 EMBL:CU861501 IPI:IPI00507978
Ensembl:ENSDART00000101707 Uniprot:E7F7R7
Length = 734
Score = 313 (115.2 bits), Expect = 2.0e-34, Sum P(2) = 2.0e-34
Identities = 60/133 (45%), Positives = 94/133 (70%)
Query: 587 QYLLEAGWCYDTKLIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTK 646
QYL +AG + + IG+T+PRR++ ++A RVS E++ LG VGY +RFDDC+T+D T
Sbjct: 53 QYLYKAGLSRNGR-IGVTQPRRVAAITVAQRVSSEMQVRLGEEVGYQVRFDDCSTKD-TM 110
Query: 647 IKYMTEGILMREMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKILKDKERDFECSDE 706
IKYMT+G L+RE++ DP L +YS+++LDE HER++ TD+L+GLLKK L R + +
Sbjct: 111 IKYMTDGCLLREILADPSLTQYSIVILDEAHERSLNTDVLLGLLKKTLLKGSRGNKTPLK 170
Query: 707 IASILSLLQVQDI 719
+ + + L+ + +
Sbjct: 171 VVVMSATLETEKL 183
Score = 296 (109.3 bits), Expect = 1.9e-38, Sum P(3) = 1.9e-38
Identities = 79/235 (33%), Positives = 122/235 (51%)
Query: 348 RTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYYSN-----DPVVN-Y 401
+T LK+++ SAT++ E++ FY N + ++ G YPV + N D + Y
Sbjct: 166 KTPLKVVVMSATLETEKLSSFYG-----NCPVFTIPGRTYPVKETFCNLIGPKDKESSVY 220
Query: 402 VQGVVDTAIKIHESMPVGDILAFVIGLEQIEHIIGILKQ--------Y--HNQREDLKLL 451
V+ VV + +H + GDIL F+ G +IE +L + Y H++ D LL
Sbjct: 221 VKEVVKMTLDVHTNEAAGDILVFLTGQSEIEKACDLLFEKAEILDYRYDVHDRSVD-GLL 279
Query: 452 ILPMHGSLPNNEQIKVFRPTPRAMRKIVIATNIAETSITIPGIVYVIDPGFVKARWFNPN 511
IL ++GS+P ++Q ++F+P P+ +RK V+ATNIA TS+TI GI Y++D GFVK N
Sbjct: 280 ILSLYGSMPTDQQRQIFQPAPKGVRKCVVATNIAATSLTIDGIRYIVDSGFVKQLNHNSR 339
Query: 512 TLTNSLVVVPISKXXXXXXXXXXXXXXXXHVYRKNFMYNRLFIHFCVSR-NIPTI 565
+ L VVPISK +R +Y++ F C+ IP I
Sbjct: 340 VGLDILEVVPISKSEAQQRAGRAGRTAAGKCFR---IYSKDFWDTCMPEYTIPEI 391
Score = 169 (64.5 bits), Expect = 2.5e-24, Sum P(3) = 2.5e-24
Identities = 38/103 (36%), Positives = 61/103 (59%)
Query: 43 KFSRLYTEASFSQ-LNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRVA 101
K R+Y++ + + E T PE+QRT L+S +L LK LG+H+++RF + P + + A
Sbjct: 369 KCFRIYSKDFWDTCMPEYTIPEIQRTSLTSVILTLKCLGVHDVIRFPYLDCPEERFILTA 428
Query: 102 LELLYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLLSSGSV 144
L+ LY A+D G +TK +G M E PL P + LL + ++
Sbjct: 429 LKQLYQYDAIDRRGEVTK-LGRLMVEFPLPPNLTRALLKAAAL 470
Score = 144 (55.7 bits), Expect = 1.9e-38, Sum P(3) = 1.9e-38
Identities = 43/153 (28%), Positives = 76/153 (49%)
Query: 703 CSDEIASILSLLQVQDIFIKPSSGALSLKARVLRRNFEVEQG---DLLTLLNIFKFYEKQ 759
C D + + ++L V++IFI+P +A V + G D L LL +F+
Sbjct: 472 CEDIMLPVAAMLSVENIFIRPGKPEKQKEAEVRHKEIAACSGGSNDFLMLLCVFEKCRAS 531
Query: 760 ENKKQFCHKYFFNYKVLKRAAELKNQM--ILL-LKKSS-IPLVTSPRNTNAVLK-CLTNG 814
EN +C + + +++ +K A ++ Q+ ILL LK+ P + + +L+ CL G
Sbjct: 532 ENPSAWCKENWIHWRAVKSAFSVETQLREILLRLKQQKDFPHERFEGSRSELLRQCLCLG 591
Query: 815 FFSNAAYLHYSGVYRTVRGN-EDLYIHPSSVLY 846
+F+N A + T+ G+ + IHPSS L+
Sbjct: 592 YFTNVARRSIGKSFCTMDGHGSSVLIHPSSCLF 624
Score = 101 (40.6 bits), Expect = 1.9e-38, Sum P(3) = 1.9e-38
Identities = 18/43 (41%), Positives = 31/43 (72%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILMECSRK 43
MT+G L+ DPS+ +YS+++LD+ HER++ TD+L+ +K
Sbjct: 114 MTDGCLLREILADPSLTQYSIVILDEAHERSLNTDVLLGLLKK 156
Score = 42 (19.8 bits), Expect = 3.5e-11, Sum P(3) = 3.5e-11
Identities = 24/108 (22%), Positives = 43/108 (39%)
Query: 593 GWCYDTKLIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTKIKYMTE 652
G C + G T P + + +L +E + V T+ D T E I
Sbjct: 188 GNCPVFTIPGRTYPVKETFCNLIGPKDKESSVYVKEVVKMTL--DVHTNEAAGDILVFLT 245
Query: 653 GILMREMMTDPLLRKYSVIMLD-EVHERTIFTDILMGLLKKILKDKER 699
G E D L K ++ +VH+R++ +++ L + D++R
Sbjct: 246 GQSEIEKACDLLFEKAEILDYRYDVHDRSVDGLLILSLYGSMPTDQQR 293
Score = 37 (18.1 bits), Expect = 2.3e-13, Sum P(3) = 2.3e-13
Identities = 6/18 (33%), Positives = 13/18 (72%)
Query: 209 QPEMGPLLLRVRRALDFP 226
+ ++ +LLR+++ DFP
Sbjct: 555 ETQLREILLRLKQQKDFP 572
>UNIPROTKB|Q08DS9 [details] [associations]
symbol:DHX40 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
HOVERGEN:HBG039428 GeneTree:ENSGT00700000104421 CTD:79665
OMA:LYGSMPT EMBL:DAAA02048338 EMBL:BC123581 IPI:IPI00715479
RefSeq:NP_001070365.1 UniGene:Bt.63706 Ensembl:ENSBTAT00000023753
GeneID:533484 KEGG:bta:533484 InParanoid:Q08DS9 NextBio:20876051
Uniprot:Q08DS9
Length = 779
Score = 315 (115.9 bits), Expect = 5.9e-35, Sum P(2) = 5.9e-35
Identities = 59/111 (53%), Positives = 87/111 (78%)
Query: 587 QYLLEAGWCYDTKLIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTK 646
+YL EAG+ +IG+T+PR+++ S+A RV+EE++ TLG VGY +RFDDC++++ T
Sbjct: 88 KYLYEAGFSQHG-MIGVTQPRKVAAISVAQRVAEEMKCTLGSKVGYQVRFDDCSSKE-TA 145
Query: 647 IKYMTEGILMREMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKILKDK 697
IKYMT+G L++ ++ DP L K+SVI+LDE HERT+ TDIL GLLKK+ ++K
Sbjct: 146 IKYMTDGCLLKHILGDPNLTKFSVIILDEAHERTLTTDILFGLLKKLFQEK 196
Score = 288 (106.4 bits), Expect = 2.0e-38, Sum P(3) = 2.0e-38
Identities = 82/252 (32%), Positives = 126/252 (50%)
Query: 330 DVIGEDMKAFAEQLKPLKRTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPV 389
D++ +K ++ P ++ LK+++ SAT++ ++ F+ N I + G LYPV
Sbjct: 183 DILFGLLKKLFQEKSPNRKEHLKVVVMSATMELAKLSAFFG-----NCPIFDIPGRLYPV 237
Query: 390 SVYYSN--DPV----VNYVQGVVDTAIKIHESMPVGDILAFVIGLEQIEHIIGILKQ--- 440
+ N P Y+Q +V + IH + GDIL F+ G +IE +L Q
Sbjct: 238 REKFCNLIGPRDRENTAYIQAIVKVTMDIHLNEMAGDILVFLTGQFEIEKSCELLFQMAE 297
Query: 441 ---YHNQREDLKL---LILPMHGSLPNNEQIKVFRPTPRAMRKIVIATNIAETSITIPGI 494
Y +D L LILP +GS+ ++Q ++F P P +RK VI+TNI+ TS+TI GI
Sbjct: 298 SVDYDYDVQDTTLDGLLILPCYGSMTTDQQRRIFLPPPPGIRKCVISTNISATSLTIDGI 357
Query: 495 VYVIDPGFVKARWFNPNTLTNSLVVVPISKXXXXXXXXXXXXXXXXHVYRKNFMYNRLFI 554
YV+D GFVK NP + L VVPISK +R +Y++ F
Sbjct: 358 RYVVDGGFVKQLNHNPRLGLDILEVVPISKSEALQRSGRAGRTSSGKCFR---IYSKDFW 414
Query: 555 HFCVSRN-IPTI 565
+ C+ + IP I
Sbjct: 415 NQCMPDHVIPEI 426
Score = 165 (63.1 bits), Expect = 8.1e-25, Sum P(3) = 8.1e-25
Identities = 43/117 (36%), Positives = 69/117 (58%)
Query: 41 SRKFSRLYTEASFSQLNECTP----PEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQ 96
S K R+Y++ + N+C P PE++RT L+S VL LK L IH+++RF + PP +
Sbjct: 402 SGKCFRIYSKDFW---NQCMPDHVIPEIKRTSLTSVVLTLKCLAIHDVIRFPYLDPPNER 458
Query: 97 NLRVALELLYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLLSSGSVLDSAVEILL 153
+ AL+ LY A+D +G++T+ +G +M E PL P H + + LD ++LL
Sbjct: 459 LILEALKQLYQCDAIDRSGHVTR-LGLSMVEFPLPP-HLTCAVIKAASLDCE-DLLL 512
Score = 148 (57.2 bits), Expect = 2.0e-38, Sum P(3) = 2.0e-38
Identities = 43/159 (27%), Positives = 74/159 (46%)
Query: 697 KERDFECSDEIASILSLLQVQDIFIKPSSGALSLKARVLRRNFEVEQG---DLLTLLNIF 753
K +C D + I ++L V+++FI+P +A R + G D TL IF
Sbjct: 501 KAASLDCEDLLLPIAAMLSVENVFIRPVDPEYQKEAEQRHRELAAKAGGFNDFATLAVIF 560
Query: 754 KFYEKQENKKQFCHKYFFNYKVLKRAAELKNQMILLLKK----SSIPLVTSPRNTNAVLK 809
+ + +C K++ +++ L A ++ Q+ L++K S P T + VL+
Sbjct: 561 EQCKSSGAPASWCQKHWIHWRCLFSAFRVEAQLRELIRKLKQQSDFPRETFEGPKHEVLR 620
Query: 810 -CLTNGFFSNAAYLHYSGVYRTVRGN-EDLYIHPSSVLY 846
CL G+F N A + T+ G ++IHPSS L+
Sbjct: 621 RCLCAGYFKNVARRSVGRTFCTMDGRGSPVHIHPSSALH 659
Score = 107 (42.7 bits), Expect = 2.0e-38, Sum P(3) = 2.0e-38
Identities = 24/52 (46%), Positives = 36/52 (69%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILMECSRKFSRLYTEAS 52
MT+G L+++ DP++ K+SVI+LD+ HERT+ TDIL +K L+ E S
Sbjct: 149 MTDGCLLKHILGDPNLTKFSVIILDEAHERTLTTDILFGLLKK---LFQEKS 197
Score = 38 (18.4 bits), Expect = 2.9e-31, Sum P(3) = 2.9e-31
Identities = 11/54 (20%), Positives = 23/54 (42%)
Query: 55 QLNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRVALELLYSL 108
+ ++C+ E ++ L LG N+ +FS A + ++L+ L
Sbjct: 135 RFDDCSSKETAIKYMTDGCLLKHILGDPNLTKFSVIILDEAHERTLTTDILFGL 188
>UNIPROTKB|Q8IX18 [details] [associations]
symbol:DHX40 "Probable ATP-dependent RNA helicase DHX40"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOVERGEN:HBG039428 EMBL:AF461690 EMBL:AF260270
EMBL:AK025713 EMBL:AK095681 EMBL:BC024187 EMBL:AL832510
EMBL:AF319521 IPI:IPI00410110 IPI:IPI00797226 IPI:IPI01010408
RefSeq:NP_001159773.1 RefSeq:NP_078888.4 UniGene:Hs.29403
ProteinModelPortal:Q8IX18 SMR:Q8IX18 IntAct:Q8IX18 STRING:Q8IX18
PhosphoSite:Q8IX18 DMDM:116247771 PaxDb:Q8IX18 PRIDE:Q8IX18
DNASU:79665 Ensembl:ENST00000251241 GeneID:79665 KEGG:hsa:79665
UCSC:uc002ixn.2 CTD:79665 GeneCards:GC17P057642 HGNC:HGNC:18018
HPA:HPA044350 MIM:607570 neXtProt:NX_Q8IX18 PharmGKB:PA27227
InParanoid:Q8IX18 OMA:LYGSMPT PhylomeDB:Q8IX18 ChiTaRS:DHX40
GenomeRNAi:79665 NextBio:68866 ArrayExpress:Q8IX18 Bgee:Q8IX18
CleanEx:HS_DHX40 Genevestigator:Q8IX18 GermOnline:ENSG00000108406
Uniprot:Q8IX18
Length = 779
Score = 315 (115.9 bits), Expect = 5.9e-35, Sum P(2) = 5.9e-35
Identities = 59/111 (53%), Positives = 87/111 (78%)
Query: 587 QYLLEAGWCYDTKLIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTK 646
+YL EAG+ +IG+T+PR+++ S+A RV+EE++ TLG VGY +RFDDC++++ T
Sbjct: 88 KYLYEAGFSQHG-MIGVTQPRKVAAISVAQRVAEEMKCTLGSKVGYQVRFDDCSSKE-TA 145
Query: 647 IKYMTEGILMREMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKILKDK 697
IKYMT+G L++ ++ DP L K+SVI+LDE HERT+ TDIL GLLKK+ ++K
Sbjct: 146 IKYMTDGCLLKHILGDPNLTKFSVIILDEAHERTLTTDILFGLLKKLFQEK 196
Score = 288 (106.4 bits), Expect = 2.0e-38, Sum P(3) = 2.0e-38
Identities = 82/252 (32%), Positives = 126/252 (50%)
Query: 330 DVIGEDMKAFAEQLKPLKRTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPV 389
D++ +K ++ P ++ LK+++ SAT++ ++ F+ N I + G LYPV
Sbjct: 183 DILFGLLKKLFQEKSPNRKEHLKVVVMSATMELAKLSAFFG-----NCPIFDIPGRLYPV 237
Query: 390 SVYYSN--DPV----VNYVQGVVDTAIKIHESMPVGDILAFVIGLEQIEHIIGILKQ--- 440
+ N P Y+Q +V + IH + GDIL F+ G +IE +L Q
Sbjct: 238 REKFCNLIGPRDRENTAYIQAIVKVTMDIHLNEMAGDILVFLTGQFEIEKSCELLFQMAE 297
Query: 441 ---YHNQREDLKL---LILPMHGSLPNNEQIKVFRPTPRAMRKIVIATNIAETSITIPGI 494
Y +D L LILP +GS+ ++Q ++F P P +RK VI+TNI+ TS+TI GI
Sbjct: 298 SVDYDYDVQDTTLDGLLILPCYGSMTTDQQRRIFLPPPPGIRKCVISTNISATSLTIDGI 357
Query: 495 VYVIDPGFVKARWFNPNTLTNSLVVVPISKXXXXXXXXXXXXXXXXHVYRKNFMYNRLFI 554
YV+D GFVK NP + L VVPISK +R +Y++ F
Sbjct: 358 RYVVDGGFVKQLNHNPRLGLDILEVVPISKSEALQRSGRAGRTSSGKCFR---IYSKDFW 414
Query: 555 HFCVSRN-IPTI 565
+ C+ + IP I
Sbjct: 415 NQCMPDHVIPEI 426
Score = 165 (63.1 bits), Expect = 8.1e-25, Sum P(3) = 8.1e-25
Identities = 43/117 (36%), Positives = 69/117 (58%)
Query: 41 SRKFSRLYTEASFSQLNECTP----PEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQ 96
S K R+Y++ + N+C P PE++RT L+S VL LK L IH+++RF + PP +
Sbjct: 402 SGKCFRIYSKDFW---NQCMPDHVIPEIKRTSLTSVVLTLKCLAIHDVIRFPYLDPPNER 458
Query: 97 NLRVALELLYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLLSSGSVLDSAVEILL 153
+ AL+ LY A+D +G++T+ +G +M E PL P H + + LD ++LL
Sbjct: 459 LILEALKQLYQCDAIDRSGHVTR-LGLSMVEFPLPP-HLTCAVIKAASLDCE-DLLL 512
Score = 148 (57.2 bits), Expect = 2.0e-38, Sum P(3) = 2.0e-38
Identities = 43/159 (27%), Positives = 74/159 (46%)
Query: 697 KERDFECSDEIASILSLLQVQDIFIKPSSGALSLKARVLRRNFEVEQG---DLLTLLNIF 753
K +C D + I ++L V+++FI+P +A R + G D TL IF
Sbjct: 501 KAASLDCEDLLLPIAAMLSVENVFIRPVDPEYQKEAEQRHRELAAKAGGFNDFATLAVIF 560
Query: 754 KFYEKQENKKQFCHKYFFNYKVLKRAAELKNQMILLLKK----SSIPLVTSPRNTNAVLK 809
+ + +C K++ +++ L A ++ Q+ L++K S P T + VL+
Sbjct: 561 EQCKSSGAPASWCQKHWIHWRCLFSAFRVEAQLRELIRKLKQQSDFPKETFEGPKHEVLR 620
Query: 810 -CLTNGFFSNAAYLHYSGVYRTVRGN-EDLYIHPSSVLY 846
CL G+F N A + T+ G ++IHPSS L+
Sbjct: 621 RCLCAGYFKNVARRSVGRTFCTMDGRGSPVHIHPSSALH 659
Score = 107 (42.7 bits), Expect = 2.0e-38, Sum P(3) = 2.0e-38
Identities = 24/52 (46%), Positives = 36/52 (69%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILMECSRKFSRLYTEAS 52
MT+G L+++ DP++ K+SVI+LD+ HERT+ TDIL +K L+ E S
Sbjct: 149 MTDGCLLKHILGDPNLTKFSVIILDEAHERTLTTDILFGLLKK---LFQEKS 197
Score = 38 (18.4 bits), Expect = 2.9e-31, Sum P(3) = 2.9e-31
Identities = 11/54 (20%), Positives = 23/54 (42%)
Query: 55 QLNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRVALELLYSL 108
+ ++C+ E ++ L LG N+ +FS A + ++L+ L
Sbjct: 135 RFDDCSSKETAIKYMTDGCLLKHILGDPNLTKFSVIILDEAHERTLTTDILFGL 188
>UNIPROTKB|F1S235 [details] [associations]
symbol:LOC100519272 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 OMA:LYGSMPT EMBL:CU694896
RefSeq:XP_003131712.1 Ensembl:ENSSSCT00000019229 GeneID:100519272
KEGG:ssc:100519272 Uniprot:F1S235
Length = 779
Score = 315 (115.9 bits), Expect = 5.9e-35, Sum P(2) = 5.9e-35
Identities = 59/111 (53%), Positives = 87/111 (78%)
Query: 587 QYLLEAGWCYDTKLIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTK 646
+YL EAG+ +IG+T+PR+++ S+A RV+EE++ TLG VGY +RFDDC++++ T
Sbjct: 88 KYLYEAGFSQHG-MIGVTQPRKVAAISVAQRVAEEMKCTLGSKVGYQVRFDDCSSKE-TA 145
Query: 647 IKYMTEGILMREMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKILKDK 697
IKYMT+G L++ ++ DP L K+SVI+LDE HERT+ TDIL GLLKK+ ++K
Sbjct: 146 IKYMTDGCLLKHILGDPNLTKFSVIILDEAHERTLTTDILFGLLKKLFQEK 196
Score = 288 (106.4 bits), Expect = 2.0e-38, Sum P(3) = 2.0e-38
Identities = 82/252 (32%), Positives = 126/252 (50%)
Query: 330 DVIGEDMKAFAEQLKPLKRTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPV 389
D++ +K ++ P ++ LK+++ SAT++ ++ F+ N I + G LYPV
Sbjct: 183 DILFGLLKKLFQEKSPNRKEHLKVVVMSATMELAKLSAFFG-----NCPIFDIPGRLYPV 237
Query: 390 SVYYSN--DPV----VNYVQGVVDTAIKIHESMPVGDILAFVIGLEQIEHIIGILKQ--- 440
+ N P Y+Q +V + IH + GDIL F+ G +IE +L Q
Sbjct: 238 REKFCNLIGPRDRENTAYIQAIVKVTMDIHLNEMAGDILVFLTGQFEIEKSCELLFQMAE 297
Query: 441 ---YHNQREDLKL---LILPMHGSLPNNEQIKVFRPTPRAMRKIVIATNIAETSITIPGI 494
Y +D L LILP +GS+ ++Q ++F P P +RK VI+TNI+ TS+TI GI
Sbjct: 298 SVDYDYDVQDTTLDGLLILPCYGSMTTDQQRRIFLPPPPGIRKCVISTNISATSLTIDGI 357
Query: 495 VYVIDPGFVKARWFNPNTLTNSLVVVPISKXXXXXXXXXXXXXXXXHVYRKNFMYNRLFI 554
YV+D GFVK NP + L VVPISK +R +Y++ F
Sbjct: 358 RYVVDGGFVKQLNHNPRLGLDILEVVPISKSEALQRSGRAGRTSSGKCFR---IYSKDFW 414
Query: 555 HFCVSRN-IPTI 565
+ C+ + IP I
Sbjct: 415 NQCMPDHVIPEI 426
Score = 165 (63.1 bits), Expect = 8.1e-25, Sum P(3) = 8.1e-25
Identities = 43/117 (36%), Positives = 69/117 (58%)
Query: 41 SRKFSRLYTEASFSQLNECTP----PEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQ 96
S K R+Y++ + N+C P PE++RT L+S VL LK L IH+++RF + PP +
Sbjct: 402 SGKCFRIYSKDFW---NQCMPDHVIPEIKRTSLTSVVLTLKCLAIHDVIRFPYLDPPNER 458
Query: 97 NLRVALELLYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLLSSGSVLDSAVEILL 153
+ AL+ LY A+D +G++T+ +G +M E PL P H + + LD ++LL
Sbjct: 459 LILEALKQLYQCDAIDRSGHVTR-LGLSMVEFPLPP-HLTCAVIKAASLDCE-DLLL 512
Score = 148 (57.2 bits), Expect = 2.0e-38, Sum P(3) = 2.0e-38
Identities = 43/159 (27%), Positives = 74/159 (46%)
Query: 697 KERDFECSDEIASILSLLQVQDIFIKPSSGALSLKARVLRRNFEVEQG---DLLTLLNIF 753
K +C D + I ++L V+++FI+P +A R + G D TL IF
Sbjct: 501 KAASLDCEDLLLPIAAMLSVENVFIRPVDPEYQKEAEQRHRELAAKAGGFNDFATLAVIF 560
Query: 754 KFYEKQENKKQFCHKYFFNYKVLKRAAELKNQMILLLKK----SSIPLVTSPRNTNAVLK 809
+ + +C K++ +++ L A ++ Q+ L++K S P T + VL+
Sbjct: 561 EQCKSSGAPASWCQKHWIHWRCLFSAFRVEAQLRELIRKLKQQSDFPRETFEGPKHEVLR 620
Query: 810 -CLTNGFFSNAAYLHYSGVYRTVRGN-EDLYIHPSSVLY 846
CL G+F N A + T+ G ++IHPSS L+
Sbjct: 621 RCLCAGYFKNVARRSVGRTFCTMDGRGSPVHIHPSSALH 659
Score = 107 (42.7 bits), Expect = 2.0e-38, Sum P(3) = 2.0e-38
Identities = 24/52 (46%), Positives = 36/52 (69%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILMECSRKFSRLYTEAS 52
MT+G L+++ DP++ K+SVI+LD+ HERT+ TDIL +K L+ E S
Sbjct: 149 MTDGCLLKHILGDPNLTKFSVIILDEAHERTLTTDILFGLLKK---LFQEKS 197
Score = 38 (18.4 bits), Expect = 2.9e-31, Sum P(3) = 2.9e-31
Identities = 11/54 (20%), Positives = 23/54 (42%)
Query: 55 QLNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRVALELLYSL 108
+ ++C+ E ++ L LG N+ +FS A + ++L+ L
Sbjct: 135 RFDDCSSKETAIKYMTDGCLLKHILGDPNLTKFSVIILDEAHERTLTTDILFGL 188
>UNIPROTKB|J9NVQ3 [details] [associations]
symbol:DHX40 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 OMA:LYGSMPT EMBL:AAEX03006584
EMBL:AAEX03006585 Ensembl:ENSCAFT00000048714 Uniprot:J9NVQ3
Length = 857
Score = 310 (114.2 bits), Expect = 3.1e-34, Sum P(2) = 3.1e-34
Identities = 58/111 (52%), Positives = 86/111 (77%)
Query: 587 QYLLEAGWCYDTKLIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTK 646
+YL EAG+ +IG+T+PR+++ S+A RV+EE++ LG VGY +RFDDC++++ T
Sbjct: 166 KYLYEAGFSQHG-MIGVTQPRKVAAISVAQRVAEEMKCALGSKVGYQVRFDDCSSKE-TA 223
Query: 647 IKYMTEGILMREMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKILKDK 697
IKYMT+G L++ ++ DP L K+SVI+LDE HERT+ TDIL GLLKK+ ++K
Sbjct: 224 IKYMTDGCLLKHILGDPNLTKFSVIILDEAHERTLTTDILFGLLKKLFQEK 274
Score = 288 (106.4 bits), Expect = 3.5e-38, Sum P(3) = 3.5e-38
Identities = 82/252 (32%), Positives = 126/252 (50%)
Query: 330 DVIGEDMKAFAEQLKPLKRTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPV 389
D++ +K ++ P ++ LK+++ SAT++ ++ F+ N I + G LYPV
Sbjct: 261 DILFGLLKKLFQEKSPNRKEHLKVVVMSATMELAKLSAFFG-----NCPIFDIPGRLYPV 315
Query: 390 SVYYSN--DPV----VNYVQGVVDTAIKIHESMPVGDILAFVIGLEQIEHIIGILKQ--- 440
+ N P Y+Q +V + IH + GDIL F+ G +IE +L Q
Sbjct: 316 REKFCNLIGPRDRENTAYIQAIVKVTMDIHLNEMAGDILVFLTGQFEIEKSCELLFQMAE 375
Query: 441 ---YHNQREDLKL---LILPMHGSLPNNEQIKVFRPTPRAMRKIVIATNIAETSITIPGI 494
Y +D L LILP +GS+ ++Q ++F P P +RK VI+TNI+ TS+TI GI
Sbjct: 376 SVDYDYDVQDTTLDGLLILPCYGSMTTDQQRRIFLPPPPGIRKCVISTNISATSLTIDGI 435
Query: 495 VYVIDPGFVKARWFNPNTLTNSLVVVPISKXXXXXXXXXXXXXXXXHVYRKNFMYNRLFI 554
YV+D GFVK NP + L VVPISK +R +Y++ F
Sbjct: 436 RYVVDGGFVKQLNHNPRLGLDILEVVPISKSEALQRSGRAGRTSSGKCFR---IYSKDFW 492
Query: 555 HFCVSRN-IPTI 565
+ C+ + IP I
Sbjct: 493 NQCMPDHVIPEI 504
Score = 165 (63.1 bits), Expect = 1.2e-24, Sum P(3) = 1.2e-24
Identities = 43/117 (36%), Positives = 69/117 (58%)
Query: 41 SRKFSRLYTEASFSQLNECTP----PEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQ 96
S K R+Y++ + N+C P PE++RT L+S VL LK L IH+++RF + PP +
Sbjct: 480 SGKCFRIYSKDFW---NQCMPDHVIPEIKRTSLTSVVLTLKCLAIHDVIRFPYLDPPNER 536
Query: 97 NLRVALELLYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLLSSGSVLDSAVEILL 153
+ AL+ LY A+D +G++T+ +G +M E PL P H + + LD ++LL
Sbjct: 537 LILEALKQLYQCDAIDRSGHVTR-LGLSMVEFPLPP-HLTCAVIKAASLDCE-DLLL 590
Score = 148 (57.2 bits), Expect = 3.5e-38, Sum P(3) = 3.5e-38
Identities = 43/159 (27%), Positives = 74/159 (46%)
Query: 697 KERDFECSDEIASILSLLQVQDIFIKPSSGALSLKARVLRRNFEVEQG---DLLTLLNIF 753
K +C D + I ++L V+++FI+P +A R + G D TL IF
Sbjct: 579 KAASLDCEDLLLPIAAMLSVENVFIRPVDPEYQKEAEQRHRELAAKAGGFNDFATLAVIF 638
Query: 754 KFYEKQENKKQFCHKYFFNYKVLKRAAELKNQMILLLKK----SSIPLVTSPRNTNAVLK 809
+ + +C K++ +++ L A ++ Q+ L++K S P T + VL+
Sbjct: 639 EQCKSSGAPASWCQKHWIHWRCLFSAFRVEAQLRELIRKLKQQSDFPRETFEGPKHEVLR 698
Query: 810 -CLTNGFFSNAAYLHYSGVYRTVRGN-EDLYIHPSSVLY 846
CL G+F N A + T+ G ++IHPSS L+
Sbjct: 699 RCLCAGYFKNVARRSVGRTFCTMDGRGSPVHIHPSSALH 737
Score = 107 (42.7 bits), Expect = 3.5e-38, Sum P(3) = 3.5e-38
Identities = 24/52 (46%), Positives = 36/52 (69%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILMECSRKFSRLYTEAS 52
MT+G L+++ DP++ K+SVI+LD+ HERT+ TDIL +K L+ E S
Sbjct: 227 MTDGCLLKHILGDPNLTKFSVIILDEAHERTLTTDILFGLLKK---LFQEKS 275
Score = 38 (18.4 bits), Expect = 5.0e-31, Sum P(3) = 5.0e-31
Identities = 11/54 (20%), Positives = 23/54 (42%)
Query: 55 QLNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRVALELLYSL 108
+ ++C+ E ++ L LG N+ +FS A + ++L+ L
Sbjct: 213 RFDDCSSKETAIKYMTDGCLLKHILGDPNLTKFSVIILDEAHERTLTTDILFGL 266
>RGD|1359618 [details] [associations]
symbol:Dhx40 "DEAH (Asp-Glu-Ala-His) box polypeptide 40"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1359618 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 HOVERGEN:HBG039428
GeneTree:ENSGT00700000104421 CTD:79665 OMA:LYGSMPT
OrthoDB:EOG48PMJH EMBL:BC083821 IPI:IPI00369962
RefSeq:NP_001005873.1 UniGene:Rn.29182 ProteinModelPortal:Q5XI69
PhosphoSite:Q5XI69 Ensembl:ENSRNOT00000006926 GeneID:287595
KEGG:rno:287595 InParanoid:Q5XI69 NextBio:626568
ArrayExpress:Q5XI69 Genevestigator:Q5XI69
GermOnline:ENSRNOG00000004549 Uniprot:Q5XI69
Length = 779
Score = 320 (117.7 bits), Expect = 3.4e-35, Sum P(2) = 3.4e-35
Identities = 60/111 (54%), Positives = 87/111 (78%)
Query: 587 QYLLEAGWCYDTKLIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTK 646
+YL EAG+ +IG+T+PR+++ S+A RV+EE++ TLG VGY +RFDDC++++ T
Sbjct: 88 KYLYEAGFSQHG-MIGVTQPRKVAAISVAQRVAEEMKCTLGSKVGYQVRFDDCSSKE-TA 145
Query: 647 IKYMTEGILMREMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKILKDK 697
IKYMT+G L++ ++ DP L K+SVI+LDE HERT+ TDIL GLLKK+ +DK
Sbjct: 146 IKYMTDGCLLKHILGDPNLNKFSVIILDEAHERTLTTDILFGLLKKLFQDK 196
Score = 286 (105.7 bits), Expect = 7.0e-38, Sum P(3) = 7.0e-38
Identities = 82/252 (32%), Positives = 125/252 (49%)
Query: 330 DVIGEDMKAFAEQLKPLKRTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPV 389
D++ +K + P ++ LK+++ SAT++ ++ F+ N I + G LYPV
Sbjct: 183 DILFGLLKKLFQDKSPNRKEHLKVVVMSATMELAKLSAFFG-----NCPIFDIPGRLYPV 237
Query: 390 SVYYSN--DPV----VNYVQGVVDTAIKIHESMPVGDILAFVIGLEQIEHIIGILKQ--- 440
+ N P Y+Q +V + IH + GDIL F+ G +IE +L Q
Sbjct: 238 REKFCNLIGPRDRENTAYIQAIVKVTMDIHLNEMAGDILVFLTGQFEIEKSCELLFQMAE 297
Query: 441 ---YHNQREDLKL---LILPMHGSLPNNEQIKVFRPTPRAMRKIVIATNIAETSITIPGI 494
Y +D L LILP +GS+ ++Q ++F P P +RK VI+TNI+ TS+TI GI
Sbjct: 298 SVDYDYDVQDTTLDGLLILPCYGSMTTDQQRRIFLPPPPGIRKCVISTNISATSLTIDGI 357
Query: 495 VYVIDPGFVKARWFNPNTLTNSLVVVPISKXXXXXXXXXXXXXXXXHVYRKNFMYNRLFI 554
YV+D GFVK NP + L VVPISK +R +Y++ F
Sbjct: 358 RYVVDGGFVKQLNHNPRLGLDILEVVPISKSEALQRSGRAGRTASGKCFR---IYSKDFW 414
Query: 555 HFCVSRN-IPTI 565
+ C+ + IP I
Sbjct: 415 NQCMPDHVIPEI 426
Score = 164 (62.8 bits), Expect = 2.1e-24, Sum P(3) = 2.1e-24
Identities = 43/117 (36%), Positives = 69/117 (58%)
Query: 41 SRKFSRLYTEASFSQLNECTP----PEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQ 96
S K R+Y++ + N+C P PE++RT L+S VL LK L IH+++RF + PP +
Sbjct: 402 SGKCFRIYSKDFW---NQCMPDHVIPEIKRTSLTSVVLTLKCLAIHDVIRFPYLDPPNER 458
Query: 97 NLRVALELLYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLLSSGSVLDSAVEILL 153
+ AL+ LY A+D +G++T+ +G +M E PL P H + + LD ++LL
Sbjct: 459 LILEALKQLYQCDAIDRSGHVTR-LGLSMVEFPLPP-HLTCAVIRAASLDCE-DLLL 512
Score = 145 (56.1 bits), Expect = 7.0e-38, Sum P(3) = 7.0e-38
Identities = 42/154 (27%), Positives = 73/154 (47%)
Query: 702 ECSDEIASILSLLQVQDIFIKPSSGALSLKARVLRRNFEVEQG---DLLTLLNIFKFYEK 758
+C D + I ++L V+++FI+P +A R + G D TL IF+ +
Sbjct: 506 DCEDLLLPIAAMLSVENVFIRPVDPEYQKEAEQKHRELAAKAGGFNDFATLAVIFEQCKS 565
Query: 759 QENKKQFCHKYFFNYKVLKRAAELKNQMILLLKK----SSIPLVTSPRNTNAVLK-CLTN 813
+C K++ +++ L A ++ Q+ L++K S P T + VL+ CL
Sbjct: 566 SGAPASWCQKHWIHWRCLFSAFRVEAQLRELIRKLKQQSDFPRETFEGPKHEVLRRCLCA 625
Query: 814 GFFSNAAYLHYSGVYRTVRGN-EDLYIHPSSVLY 846
G+F N A + T+ G ++IHPSS L+
Sbjct: 626 GYFKNVARRSVGRTFCTMDGRGSPVHIHPSSALH 659
Score = 107 (42.7 bits), Expect = 7.0e-38, Sum P(3) = 7.0e-38
Identities = 21/43 (48%), Positives = 32/43 (74%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILMECSRK 43
MT+G L+++ DP++ K+SVI+LD+ HERT+ TDIL +K
Sbjct: 149 MTDGCLLKHILGDPNLNKFSVIILDEAHERTLTTDILFGLLKK 191
>MGI|MGI:1914737 [details] [associations]
symbol:Dhx40 "DEAH (Asp-Glu-Ala-His) box polypeptide 40"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 MGI:MGI:1914737
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 EMBL:AL592222 HOVERGEN:HBG039428
GeneTree:ENSGT00700000104421 CTD:79665 OMA:LYGSMPT EMBL:AK004610
EMBL:AK010512 EMBL:AK031000 EMBL:AK075991 EMBL:AL596111
EMBL:BC058276 IPI:IPI00453964 RefSeq:NP_080467.3 UniGene:Mm.260627
ProteinModelPortal:Q6PE54 SMR:Q6PE54 STRING:Q6PE54
PhosphoSite:Q6PE54 PaxDb:Q6PE54 PRIDE:Q6PE54
Ensembl:ENSMUST00000018569 GeneID:67487 KEGG:mmu:67487
UCSC:uc007ktc.1 InParanoid:Q6PE54 OrthoDB:EOG48PMJH NextBio:324718
Bgee:Q6PE54 CleanEx:MM_DHX40 Genevestigator:Q6PE54
GermOnline:ENSMUSG00000018425 Uniprot:Q6PE54
Length = 779
Score = 319 (117.4 bits), Expect = 4.4e-35, Sum P(2) = 4.4e-35
Identities = 60/111 (54%), Positives = 87/111 (78%)
Query: 587 QYLLEAGWCYDTKLIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTK 646
+YL EAG+ +IG+T+PR+++ S+A RV+EE++ TLG VGY +RFDDC++++ T
Sbjct: 88 KYLYEAGFSQHG-MIGVTQPRKVAAISVAQRVAEEMKCTLGSKVGYQVRFDDCSSKE-TA 145
Query: 647 IKYMTEGILMREMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKILKDK 697
IKYMT+G L++ ++ DP L K+SVI+LDE HERT+ TDIL GLLKK+ +DK
Sbjct: 146 IKYMTDGCLLKHILGDPNLSKFSVIILDEAHERTLTTDILFGLLKKLFQDK 196
Score = 285 (105.4 bits), Expect = 9.0e-38, Sum P(3) = 9.0e-38
Identities = 82/252 (32%), Positives = 124/252 (49%)
Query: 330 DVIGEDMKAFAEQLKPLKRTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPV 389
D++ +K + P ++ LK+++ SAT++ ++ F+ N I + G LYPV
Sbjct: 183 DILFGLLKKLFQDKSPNRKEHLKVVVMSATMELAKLSAFFG-----NCPIFDIPGRLYPV 237
Query: 390 SVYYSN--DPV----VNYVQGVVDTAIKIHESMPVGDILAFVIGLEQIEHIIGILKQ--- 440
+ N P Y+Q +V + IH + GDIL F+ G +IE +L Q
Sbjct: 238 REKFCNLIGPRDRENTAYIQAIVKVTMDIHLNEMAGDILVFLTGQFEIEKSCELLFQMAE 297
Query: 441 ---YHNQREDLKL---LILPMHGSLPNNEQIKVFRPTPRAMRKIVIATNIAETSITIPGI 494
Y +D L LILP +GS+ ++Q ++F P P +RK VI+TNI+ TS+TI GI
Sbjct: 298 SVDYDYDVQDTTLDGLLILPCYGSMTTDQQRRIFLPPPPGIRKCVISTNISATSLTIDGI 357
Query: 495 VYVIDPGFVKARWFNPNTLTNSLVVVPISKXXXXXXXXXXXXXXXXHVYRKNFMYNRLFI 554
YV+D GFVK NP + L VVPISK +R +Y++ F
Sbjct: 358 RYVVDGGFVKQLNHNPRLGLDILEVVPISKSEALQRSGRAGRTASGKCFR---IYSKEFW 414
Query: 555 HFCVSRN-IPTI 565
C+ + IP I
Sbjct: 415 SQCMPDHVIPEI 426
Score = 166 (63.5 bits), Expect = 1.3e-24, Sum P(3) = 1.3e-24
Identities = 44/117 (37%), Positives = 69/117 (58%)
Query: 41 SRKFSRLYTEASFSQLNECTP----PEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQ 96
S K R+Y++ +SQ C P PE++RT L+S VL LK L IH+++RF + PP +
Sbjct: 402 SGKCFRIYSKEFWSQ---CMPDHVIPEIKRTSLTSVVLTLKCLAIHDVIRFPYLDPPNER 458
Query: 97 NLRVALELLYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLLSSGSVLDSAVEILL 153
+ AL+ LY A+D +G++T+ +G +M E PL P H + + LD ++LL
Sbjct: 459 LILEALKQLYQCDAIDRSGHVTR-LGLSMVEFPLPP-HLTCAVIRAASLDCE-DLLL 512
Score = 145 (56.1 bits), Expect = 9.0e-38, Sum P(3) = 9.0e-38
Identities = 42/154 (27%), Positives = 73/154 (47%)
Query: 702 ECSDEIASILSLLQVQDIFIKPSSGALSLKARVLRRNFEVEQG---DLLTLLNIFKFYEK 758
+C D + I ++L V+++FI+P +A R + G D TL IF+ +
Sbjct: 506 DCEDLLLPIAAMLSVENVFIRPVDPEYQKEAEQRHRELAAKAGGFNDFATLAVIFEQCKS 565
Query: 759 QENKKQFCHKYFFNYKVLKRAAELKNQMILLLKK----SSIPLVTSPRNTNAVLK-CLTN 813
+C K++ +++ L A ++ Q+ L++K S P T + VL+ CL
Sbjct: 566 SGAPASWCQKHWIHWRCLFSAFRVEAQLRELIRKLKQQSDFPRETFEGPKHEVLRRCLCA 625
Query: 814 GFFSNAAYLHYSGVYRTVRGN-EDLYIHPSSVLY 846
G+F N A + T+ G ++IHPSS L+
Sbjct: 626 GYFKNVARRSVGRTFCTMDGRGSPVHIHPSSALH 659
Score = 107 (42.7 bits), Expect = 9.0e-38, Sum P(3) = 9.0e-38
Identities = 21/43 (48%), Positives = 32/43 (74%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILMECSRK 43
MT+G L+++ DP++ K+SVI+LD+ HERT+ TDIL +K
Sbjct: 149 MTDGCLLKHILGDPNLSKFSVIILDEAHERTLTTDILFGLLKK 191
Score = 37 (18.1 bits), Expect = 1.7e-30, Sum P(3) = 1.7e-30
Identities = 11/54 (20%), Positives = 23/54 (42%)
Query: 55 QLNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRVALELLYSL 108
+ ++C+ E ++ L LG N+ +FS A + ++L+ L
Sbjct: 135 RFDDCSSKETAIKYMTDGCLLKHILGDPNLSKFSVIILDEAHERTLTTDILFGL 188
>GENEDB_PFALCIPARUM|PFL1525c [details] [associations]
symbol:PFL1525c "pre-mRNA splicing factor RNA
helicase, putative" species:5833 "Plasmodium falciparum"
[GO:0051726 "regulation of cell cycle" evidence=ISS] [GO:0008380
"RNA splicing" evidence=ISS] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008380 GO:GO:0005681
GO:GO:0003676 GO:GO:0051726 EMBL:AE014188 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 HOGENOM:HOG000175261 KO:K01509 RefSeq:XP_001350711.1
ProteinModelPortal:Q8I5A4 IntAct:Q8I5A4 MINT:MINT-1581184
PRIDE:Q8I5A4 EnsemblProtists:PFL1525c:mRNA GeneID:811357
KEGG:pfa:PFL1525c EuPathDB:PlasmoDB:PF3D7_1231600
ProtClustDB:CLSZ2514931 Uniprot:Q8I5A4
Length = 1168
Score = 233 (87.1 bits), Expect = 5.8e-29, Sum P(2) = 5.8e-29
Identities = 47/112 (41%), Positives = 74/112 (66%)
Query: 587 QYLLEAGWCYDTKLIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTK 646
QYL E + +I T+PRRI+ ++ANRV+EE+ +G VGY IRF + T+E TK
Sbjct: 473 QYLYECKYHMYGNII-CTQPRRIACIAIANRVAEEMNVKIGKEVGYVIRFQNKTSE-ATK 530
Query: 647 IKYMTEGILMREMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKILKDKE 698
I YMT+G+ +R ++ +P L SV+++DE HER + TD+++ ++K I +E
Sbjct: 531 IMYMTDGMFLRLLLYNPTLEDISVLIIDEAHERALHTDVILPIVKDICNFRE 582
Score = 207 (77.9 bits), Expect = 1.3e-29, Sum P(3) = 1.3e-29
Identities = 48/110 (43%), Positives = 69/110 (62%)
Query: 43 KFSRLYTEASFSQLNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRVAL 102
K RL+T+ SF L++ + PE+QR E+SS +L LK+LG+ +I+ F F PP + L
Sbjct: 868 KCFRLFTKKSFIDLSDNSIPEIQRCEISSMILLLKSLGMDDIINFDFLDPPSPIVIIKGL 927
Query: 103 ELLYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLLSSGSVLDSAVEIL 152
ELLYSLGA++ GNLT+ G MAE P +K++LS+ + EIL
Sbjct: 928 ELLYSLGALNDEGNLTR-TGRKMAEFPTDVKSSKMILSAAEKYNCVDEIL 976
Score = 182 (69.1 bits), Expect = 2.3e-37, Sum P(4) = 2.3e-37
Identities = 48/162 (29%), Positives = 85/162 (52%)
Query: 691 KKILKDKERDFECSDEIASILSLL-QVQDIFIKPSSGALSLKARVLRRNFEVEQG-DLLT 748
K IL E+ + C DEI ++ S+L +IF G +A +++ F +E G D L
Sbjct: 960 KMILSAAEK-YNCVDEILNVASMLTHANNIFYV-QKGK-EKEAENIKKMFIIEGGGDFLL 1016
Query: 749 LLNIFKFYEKQENKKQFCHKYFFNYKVLKRAAELKNQMILLLKKSSIPLVT----SPRNT 804
LNI+K E+ FC+ +F Y L + ++K Q++ + +K IP+ T + +
Sbjct: 1017 FLNIYKQCEENNFSTSFCYDHFLQYHTLIKVKDVKTQLLSICEKIDIPITTCGIENHESI 1076
Query: 805 NAVLKCLTNGFFSNAAYLHYSGVYRTVRGNEDLYIHPSSVLY 846
N + K + + FF+NAA + ++ N+ + I+P+SVL+
Sbjct: 1077 NNIKKSIVSAFFTNAALPVNKTELKIIKLNQVVSIYPNSVLF 1118
Score = 178 (67.7 bits), Expect = 2.3e-37, Sum P(4) = 2.3e-37
Identities = 44/123 (35%), Positives = 70/123 (56%)
Query: 348 RTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYYSNDPVVNYVQGVVD 407
R ++++ISSAT+DAE+I ++N A I V G Y V +YY+ + NY+ +V
Sbjct: 581 RENIRVVISSATLDAEKISTYFNC-----APIFYVPGRKYNVDIYYTINNESNYISAIVI 635
Query: 408 TAIKIHESMPVGDILAFVIGLEQIEHIIGILKQYHNQREDL--KLLILPMHGSLPNNEQI 465
T ++IH + GDIL F+ G +IE + L+ N+ L+ILP++ SLP Q
Sbjct: 636 TILQIHITQGKGDILVFLPGQYEIELVQQELENKLNELAPKYRNLVILPIYSSLPVEYQA 695
Query: 466 KVF 468
++F
Sbjct: 696 RIF 698
Score = 151 (58.2 bits), Expect = 2.3e-37, Sum P(4) = 2.3e-37
Identities = 31/62 (50%), Positives = 41/62 (66%)
Query: 463 EQIKVFRPTPRAMRKIVIATNIAETSITIPGIVYVIDPGFVKARWFNPNTLTNSLVVVPI 522
E++K + RKI+++TNI ETSITI IVYVID G K + +NPN+ SLV +P
Sbjct: 790 EELKRINTNNKIRRKIILSTNICETSITIDNIVYVIDSGLCKQKIYNPNSGIESLVTLPC 849
Query: 523 SK 524
SK
Sbjct: 850 SK 851
Score = 82 (33.9 bits), Expect = 2.3e-37, Sum P(4) = 2.3e-37
Identities = 13/38 (34%), Positives = 28/38 (73%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILM 38
MT+G+ + ++P++E SV+++D+ HER + TD+++
Sbjct: 534 MTDGMFLRLLLYNPTLEDISVLIIDEAHERALHTDVIL 571
Score = 37 (18.1 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
Identities = 9/27 (33%), Positives = 17/27 (62%)
Query: 494 IVYVIDPGFVKARWFNPNTLTNSLVVV 520
I+Y+ D F++ +NP TL + V++
Sbjct: 531 IMYMTDGMFLRLLLYNP-TLEDISVLI 556
>UNIPROTKB|Q8I5A4 [details] [associations]
symbol:PFL1525c "Pre-mRNA splicing factor RNA helicase,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0005681
"spliceosomal complex" evidence=ISS] [GO:0008380 "RNA splicing"
evidence=ISS] [GO:0051726 "regulation of cell cycle" evidence=ISS]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0008380 GO:GO:0005681 GO:GO:0003676
GO:GO:0051726 EMBL:AE014188 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 KO:K01509 RefSeq:XP_001350711.1
ProteinModelPortal:Q8I5A4 IntAct:Q8I5A4 MINT:MINT-1581184
PRIDE:Q8I5A4 EnsemblProtists:PFL1525c:mRNA GeneID:811357
KEGG:pfa:PFL1525c EuPathDB:PlasmoDB:PF3D7_1231600
ProtClustDB:CLSZ2514931 Uniprot:Q8I5A4
Length = 1168
Score = 233 (87.1 bits), Expect = 5.8e-29, Sum P(2) = 5.8e-29
Identities = 47/112 (41%), Positives = 74/112 (66%)
Query: 587 QYLLEAGWCYDTKLIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTK 646
QYL E + +I T+PRRI+ ++ANRV+EE+ +G VGY IRF + T+E TK
Sbjct: 473 QYLYECKYHMYGNII-CTQPRRIACIAIANRVAEEMNVKIGKEVGYVIRFQNKTSE-ATK 530
Query: 647 IKYMTEGILMREMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKILKDKE 698
I YMT+G+ +R ++ +P L SV+++DE HER + TD+++ ++K I +E
Sbjct: 531 IMYMTDGMFLRLLLYNPTLEDISVLIIDEAHERALHTDVILPIVKDICNFRE 582
Score = 207 (77.9 bits), Expect = 1.3e-29, Sum P(3) = 1.3e-29
Identities = 48/110 (43%), Positives = 69/110 (62%)
Query: 43 KFSRLYTEASFSQLNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRVAL 102
K RL+T+ SF L++ + PE+QR E+SS +L LK+LG+ +I+ F F PP + L
Sbjct: 868 KCFRLFTKKSFIDLSDNSIPEIQRCEISSMILLLKSLGMDDIINFDFLDPPSPIVIIKGL 927
Query: 103 ELLYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLLSSGSVLDSAVEIL 152
ELLYSLGA++ GNLT+ G MAE P +K++LS+ + EIL
Sbjct: 928 ELLYSLGALNDEGNLTR-TGRKMAEFPTDVKSSKMILSAAEKYNCVDEIL 976
Score = 182 (69.1 bits), Expect = 2.3e-37, Sum P(4) = 2.3e-37
Identities = 48/162 (29%), Positives = 85/162 (52%)
Query: 691 KKILKDKERDFECSDEIASILSLL-QVQDIFIKPSSGALSLKARVLRRNFEVEQG-DLLT 748
K IL E+ + C DEI ++ S+L +IF G +A +++ F +E G D L
Sbjct: 960 KMILSAAEK-YNCVDEILNVASMLTHANNIFYV-QKGK-EKEAENIKKMFIIEGGGDFLL 1016
Query: 749 LLNIFKFYEKQENKKQFCHKYFFNYKVLKRAAELKNQMILLLKKSSIPLVT----SPRNT 804
LNI+K E+ FC+ +F Y L + ++K Q++ + +K IP+ T + +
Sbjct: 1017 FLNIYKQCEENNFSTSFCYDHFLQYHTLIKVKDVKTQLLSICEKIDIPITTCGIENHESI 1076
Query: 805 NAVLKCLTNGFFSNAAYLHYSGVYRTVRGNEDLYIHPSSVLY 846
N + K + + FF+NAA + ++ N+ + I+P+SVL+
Sbjct: 1077 NNIKKSIVSAFFTNAALPVNKTELKIIKLNQVVSIYPNSVLF 1118
Score = 178 (67.7 bits), Expect = 2.3e-37, Sum P(4) = 2.3e-37
Identities = 44/123 (35%), Positives = 70/123 (56%)
Query: 348 RTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYYSNDPVVNYVQGVVD 407
R ++++ISSAT+DAE+I ++N A I V G Y V +YY+ + NY+ +V
Sbjct: 581 RENIRVVISSATLDAEKISTYFNC-----APIFYVPGRKYNVDIYYTINNESNYISAIVI 635
Query: 408 TAIKIHESMPVGDILAFVIGLEQIEHIIGILKQYHNQREDL--KLLILPMHGSLPNNEQI 465
T ++IH + GDIL F+ G +IE + L+ N+ L+ILP++ SLP Q
Sbjct: 636 TILQIHITQGKGDILVFLPGQYEIELVQQELENKLNELAPKYRNLVILPIYSSLPVEYQA 695
Query: 466 KVF 468
++F
Sbjct: 696 RIF 698
Score = 151 (58.2 bits), Expect = 2.3e-37, Sum P(4) = 2.3e-37
Identities = 31/62 (50%), Positives = 41/62 (66%)
Query: 463 EQIKVFRPTPRAMRKIVIATNIAETSITIPGIVYVIDPGFVKARWFNPNTLTNSLVVVPI 522
E++K + RKI+++TNI ETSITI IVYVID G K + +NPN+ SLV +P
Sbjct: 790 EELKRINTNNKIRRKIILSTNICETSITIDNIVYVIDSGLCKQKIYNPNSGIESLVTLPC 849
Query: 523 SK 524
SK
Sbjct: 850 SK 851
Score = 82 (33.9 bits), Expect = 2.3e-37, Sum P(4) = 2.3e-37
Identities = 13/38 (34%), Positives = 28/38 (73%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILM 38
MT+G+ + ++P++E SV+++D+ HER + TD+++
Sbjct: 534 MTDGMFLRLLLYNPTLEDISVLIIDEAHERALHTDVIL 571
Score = 37 (18.1 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
Identities = 9/27 (33%), Positives = 17/27 (62%)
Query: 494 IVYVIDPGFVKARWFNPNTLTNSLVVV 520
I+Y+ D F++ +NP TL + V++
Sbjct: 531 IMYMTDGMFLRLLLYNP-TLEDISVLI 556
>GENEDB_PFALCIPARUM|PF08_0042 [details] [associations]
symbol:PF08_0042 "ATP-dependent RNA helicase
prh1, putative" species:5833 "Plasmodium falciparum" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0004004 HOGENOM:HOG000175261 KO:K01509
EMBL:AL844507 RefSeq:XP_001349312.1 ProteinModelPortal:Q8IB47
EnsemblProtists:PF08_0042:mRNA GeneID:2655493 KEGG:pfa:PF08_0042
EuPathDB:PlasmoDB:PF3D7_0821300 ProtClustDB:CLSZ2515096
Uniprot:Q8IB47
Length = 867
Score = 251 (93.4 bits), Expect = 1.9e-28, Sum P(3) = 1.9e-28
Identities = 49/104 (47%), Positives = 80/104 (76%)
Query: 597 DTKLIGITEPRRISVTSLANRVSEEL-RTTLGHTVGYTIRFDDCTTEDVTKIKYMTEGIL 655
+ K + I+ PRR++ ++A RVS+E+ R +G+ VGYTIRF + + D T+IK++T+GIL
Sbjct: 68 EKKKMLISLPRRVATITVAERVSKEMKRGDIGNYVGYTIRFKNVCS-DKTRIKFVTDGIL 126
Query: 656 MREMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKILKDKER 699
+RE+M DPLL+KY ++LDE+HER+I TD+L+G K +L+ +++
Sbjct: 127 IREIMNDPLLKKYKFLILDEIHERSIRTDVLLGYTKILLQKRKK 170
Score = 191 (72.3 bits), Expect = 1.3e-36, Sum P(6) = 1.3e-36
Identities = 41/93 (44%), Positives = 54/93 (58%)
Query: 452 ILPMHGSLPNNEQIKVFRPTPRAMRKIVIATNIAETSITIPGIVYVIDPGFVKARWFNPN 511
IL ++ SLPN +Q +F P P RK++++TNIAETS+TIP I YVID G VK ++F+ N
Sbjct: 402 ILQLYSSLPNKKQKVIFEPVPPNTRKVILSTNIAETSVTIPNIKYVIDSGKVKIKYFDVN 461
Query: 512 TLTNSLVVVPISKXXXXXXXXXXXXXXXXHVYR 544
+N L V ISK VYR
Sbjct: 462 RGSNVLRVTQISKDSAIQRSGRAGREAPGQVYR 494
Score = 176 (67.0 bits), Expect = 2.8e-26, Sum P(4) = 2.8e-26
Identities = 35/96 (36%), Positives = 61/96 (63%)
Query: 46 RLYTEASFSQLNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRVALELL 105
R+YT+ + +N PE+ R++L+ L+LKA+ I+N L F+FP P + + ++L
Sbjct: 494 RIYTKEEYENMNPFLIPEIFRSDLTQIYLELKAMNINNPLEFNFPENPRKELFVHSAKML 553
Query: 106 YSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLLSS 141
+ + A+D+N NLT +G+ + PL+PI+A +LL S
Sbjct: 554 FKINAIDMNNNLTD-LGKKLCLFPLNPIYANILLCS 588
Score = 141 (54.7 bits), Expect = 1.3e-36, Sum P(6) = 1.3e-36
Identities = 38/119 (31%), Positives = 61/119 (51%)
Query: 734 VLRRNFEVEQGDLLTLLNIFKFYEKQE--NKKQFCHKYFFNYKVLKRAAELKNQMILLLK 791
V RR GD LTLL+IF +++ + KK FC+ Y N ++L++ ++K Q++ ++K
Sbjct: 703 VARRKLIHPDGDHLTLLHIFYLWQEADIKEKKHFCNIYALNNEILQQVEKIKIQLLEIMK 762
Query: 792 ---KSSIPLVTSPRNTNAVLKCLTNG-FFSNAAYLHYSGVYRTVRGNEDLYIHPSSVLY 846
K IP + +L CL FF+ A + VY + + IHPSS L+
Sbjct: 763 NKMKIEIPKKLHMHKWDQILICLCKACFFNIAKSTSNTNVYINLVNKTKIRIHPSSTLF 821
Score = 106 (42.4 bits), Expect = 1.3e-36, Sum P(6) = 1.3e-36
Identities = 22/67 (32%), Positives = 39/67 (58%)
Query: 347 KRTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYYSNDPVVNYVQGVV 406
KR ++K+I+ SAT D QF+N N I+++ L+ +++YY + +Y+ VV
Sbjct: 167 KRKKIKIILMSATFDINIFNQFFN-----NPPIITIPHKLHKITIYYPRRNIEDYILSVV 221
Query: 407 DTAIKIH 413
T ++IH
Sbjct: 222 STILQIH 228
Score = 102 (41.0 bits), Expect = 1.3e-36, Sum P(6) = 1.3e-36
Identities = 18/38 (47%), Positives = 30/38 (78%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILM 38
+T+GILI +DP ++KY ++LD++HER+I TD+L+
Sbjct: 121 VTDGILIREIMNDPLLKKYKFLILDEIHERSIRTDVLL 158
Score = 60 (26.2 bits), Expect = 1.3e-36, Sum P(6) = 1.3e-36
Identities = 11/22 (50%), Positives = 16/22 (72%)
Query: 700 DFECSDEIASILSLLQVQDIFI 721
+F C DEIA+I++LL IF+
Sbjct: 590 EFNCIDEIATIVALLNCDSIFL 611
Score = 59 (25.8 bits), Expect = 1.3e-36, Sum P(6) = 1.3e-36
Identities = 14/35 (40%), Positives = 22/35 (62%)
Query: 406 VDTAIKIHESMPVGDILAFVIGLEQIEHIIGILKQ 440
++ IK E +GDIL F+ G E+IE + +LK+
Sbjct: 304 INEDIKKTEDKSLGDILVFLPGQEEIEMVNIMLKE 338
Score = 39 (18.8 bits), Expect = 3.4e-12, Sum P(4) = 3.4e-12
Identities = 9/25 (36%), Positives = 15/25 (60%)
Query: 371 ISASSNATILSVKGHLYPVSVYYSN 395
I ++N T L K L+P++ Y+N
Sbjct: 559 IDMNNNLTDLGKKLCLFPLNPIYAN 583
>UNIPROTKB|Q8IB47 [details] [associations]
symbol:PF08_0042 "ATP-dependent RNA helicase prh1,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0004004 HOGENOM:HOG000175261 KO:K01509
EMBL:AL844507 RefSeq:XP_001349312.1 ProteinModelPortal:Q8IB47
EnsemblProtists:PF08_0042:mRNA GeneID:2655493 KEGG:pfa:PF08_0042
EuPathDB:PlasmoDB:PF3D7_0821300 ProtClustDB:CLSZ2515096
Uniprot:Q8IB47
Length = 867
Score = 251 (93.4 bits), Expect = 1.9e-28, Sum P(3) = 1.9e-28
Identities = 49/104 (47%), Positives = 80/104 (76%)
Query: 597 DTKLIGITEPRRISVTSLANRVSEEL-RTTLGHTVGYTIRFDDCTTEDVTKIKYMTEGIL 655
+ K + I+ PRR++ ++A RVS+E+ R +G+ VGYTIRF + + D T+IK++T+GIL
Sbjct: 68 EKKKMLISLPRRVATITVAERVSKEMKRGDIGNYVGYTIRFKNVCS-DKTRIKFVTDGIL 126
Query: 656 MREMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKILKDKER 699
+RE+M DPLL+KY ++LDE+HER+I TD+L+G K +L+ +++
Sbjct: 127 IREIMNDPLLKKYKFLILDEIHERSIRTDVLLGYTKILLQKRKK 170
Score = 191 (72.3 bits), Expect = 1.3e-36, Sum P(6) = 1.3e-36
Identities = 41/93 (44%), Positives = 54/93 (58%)
Query: 452 ILPMHGSLPNNEQIKVFRPTPRAMRKIVIATNIAETSITIPGIVYVIDPGFVKARWFNPN 511
IL ++ SLPN +Q +F P P RK++++TNIAETS+TIP I YVID G VK ++F+ N
Sbjct: 402 ILQLYSSLPNKKQKVIFEPVPPNTRKVILSTNIAETSVTIPNIKYVIDSGKVKIKYFDVN 461
Query: 512 TLTNSLVVVPISKXXXXXXXXXXXXXXXXHVYR 544
+N L V ISK VYR
Sbjct: 462 RGSNVLRVTQISKDSAIQRSGRAGREAPGQVYR 494
Score = 176 (67.0 bits), Expect = 2.8e-26, Sum P(4) = 2.8e-26
Identities = 35/96 (36%), Positives = 61/96 (63%)
Query: 46 RLYTEASFSQLNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRVALELL 105
R+YT+ + +N PE+ R++L+ L+LKA+ I+N L F+FP P + + ++L
Sbjct: 494 RIYTKEEYENMNPFLIPEIFRSDLTQIYLELKAMNINNPLEFNFPENPRKELFVHSAKML 553
Query: 106 YSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLLSS 141
+ + A+D+N NLT +G+ + PL+PI+A +LL S
Sbjct: 554 FKINAIDMNNNLTD-LGKKLCLFPLNPIYANILLCS 588
Score = 141 (54.7 bits), Expect = 1.3e-36, Sum P(6) = 1.3e-36
Identities = 38/119 (31%), Positives = 61/119 (51%)
Query: 734 VLRRNFEVEQGDLLTLLNIFKFYEKQE--NKKQFCHKYFFNYKVLKRAAELKNQMILLLK 791
V RR GD LTLL+IF +++ + KK FC+ Y N ++L++ ++K Q++ ++K
Sbjct: 703 VARRKLIHPDGDHLTLLHIFYLWQEADIKEKKHFCNIYALNNEILQQVEKIKIQLLEIMK 762
Query: 792 ---KSSIPLVTSPRNTNAVLKCLTNG-FFSNAAYLHYSGVYRTVRGNEDLYIHPSSVLY 846
K IP + +L CL FF+ A + VY + + IHPSS L+
Sbjct: 763 NKMKIEIPKKLHMHKWDQILICLCKACFFNIAKSTSNTNVYINLVNKTKIRIHPSSTLF 821
Score = 106 (42.4 bits), Expect = 1.3e-36, Sum P(6) = 1.3e-36
Identities = 22/67 (32%), Positives = 39/67 (58%)
Query: 347 KRTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYYSNDPVVNYVQGVV 406
KR ++K+I+ SAT D QF+N N I+++ L+ +++YY + +Y+ VV
Sbjct: 167 KRKKIKIILMSATFDINIFNQFFN-----NPPIITIPHKLHKITIYYPRRNIEDYILSVV 221
Query: 407 DTAIKIH 413
T ++IH
Sbjct: 222 STILQIH 228
Score = 102 (41.0 bits), Expect = 1.3e-36, Sum P(6) = 1.3e-36
Identities = 18/38 (47%), Positives = 30/38 (78%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILM 38
+T+GILI +DP ++KY ++LD++HER+I TD+L+
Sbjct: 121 VTDGILIREIMNDPLLKKYKFLILDEIHERSIRTDVLL 158
Score = 60 (26.2 bits), Expect = 1.3e-36, Sum P(6) = 1.3e-36
Identities = 11/22 (50%), Positives = 16/22 (72%)
Query: 700 DFECSDEIASILSLLQVQDIFI 721
+F C DEIA+I++LL IF+
Sbjct: 590 EFNCIDEIATIVALLNCDSIFL 611
Score = 59 (25.8 bits), Expect = 1.3e-36, Sum P(6) = 1.3e-36
Identities = 14/35 (40%), Positives = 22/35 (62%)
Query: 406 VDTAIKIHESMPVGDILAFVIGLEQIEHIIGILKQ 440
++ IK E +GDIL F+ G E+IE + +LK+
Sbjct: 304 INEDIKKTEDKSLGDILVFLPGQEEIEMVNIMLKE 338
Score = 39 (18.8 bits), Expect = 3.4e-12, Sum P(4) = 3.4e-12
Identities = 9/25 (36%), Positives = 15/25 (60%)
Query: 371 ISASSNATILSVKGHLYPVSVYYSN 395
I ++N T L K L+P++ Y+N
Sbjct: 559 IDMNNNLTDLGKKLCLFPLNPIYAN 583
>UNIPROTKB|E2RPC8 [details] [associations]
symbol:DHX40 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 EMBL:AAEX03006584 EMBL:AAEX03006585
Ensembl:ENSCAFT00000027962 Uniprot:E2RPC8
Length = 781
Score = 310 (114.2 bits), Expect = 1.6e-32, Sum P(2) = 1.6e-32
Identities = 58/111 (52%), Positives = 86/111 (77%)
Query: 587 QYLLEAGWCYDTKLIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTK 646
+YL EAG+ +IG+T+PR+++ S+A RV+EE++ LG VGY +RFDDC++++ T
Sbjct: 88 KYLYEAGFSQHG-MIGVTQPRKVAAISVAQRVAEEMKCALGSKVGYQVRFDDCSSKE-TA 145
Query: 647 IKYMTEGILMREMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKILKDK 697
IKYMT+G L++ ++ DP L K+SVI+LDE HERT+ TDIL GLLKK+ ++K
Sbjct: 146 IKYMTDGCLLKHILGDPNLTKFSVIILDEAHERTLTTDILFGLLKKLFQEK 196
Score = 288 (106.4 bits), Expect = 1.5e-36, Sum P(3) = 1.5e-36
Identities = 82/252 (32%), Positives = 126/252 (50%)
Query: 330 DVIGEDMKAFAEQLKPLKRTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPV 389
D++ +K ++ P ++ LK+++ SAT++ ++ F+ N I + G LYPV
Sbjct: 183 DILFGLLKKLFQEKSPNRKEHLKVVVMSATMELAKLSAFFG-----NCPIFDIPGRLYPV 237
Query: 390 SVYYSN--DPV----VNYVQGVVDTAIKIHESMPVGDILAFVIGLEQIEHIIGILKQ--- 440
+ N P Y+Q +V + IH + GDIL F+ G +IE +L Q
Sbjct: 238 REKFCNLIGPRDRENTAYIQAIVKVTMDIHLNEMAGDILVFLTGQFEIEKSCELLFQMAE 297
Query: 441 ---YHNQREDLKL---LILPMHGSLPNNEQIKVFRPTPRAMRKIVIATNIAETSITIPGI 494
Y +D L LILP +GS+ ++Q ++F P P +RK VI+TNI+ TS+TI GI
Sbjct: 298 SVDYDYDVQDTTLDGLLILPCYGSMTTDQQRRIFLPPPPGIRKCVISTNISATSLTIDGI 357
Query: 495 VYVIDPGFVKARWFNPNTLTNSLVVVPISKXXXXXXXXXXXXXXXXHVYRKNFMYNRLFI 554
YV+D GFVK NP + L VVPISK +R +Y++ F
Sbjct: 358 RYVVDGGFVKQLNHNPRLGLDILEVVPISKSEALQRSGRAGRTSSGKCFR---IYSKDFW 414
Query: 555 HFCVSRN-IPTI 565
+ C+ + IP I
Sbjct: 415 NQCMPDHVIPEI 426
Score = 165 (63.1 bits), Expect = 5.9e-23, Sum P(3) = 5.9e-23
Identities = 43/117 (36%), Positives = 69/117 (58%)
Query: 41 SRKFSRLYTEASFSQLNECTP----PEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQ 96
S K R+Y++ + N+C P PE++RT L+S VL LK L IH+++RF + PP +
Sbjct: 402 SGKCFRIYSKDFW---NQCMPDHVIPEIKRTSLTSVVLTLKCLAIHDVIRFPYLDPPNER 458
Query: 97 NLRVALELLYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLLSSGSVLDSAVEILL 153
+ AL+ LY A+D +G++T+ +G +M E PL P H + + LD ++LL
Sbjct: 459 LILEALKQLYQCDAIDRSGHVTR-LGLSMVEFPLPP-HLTCAVIKAASLDCE-DLLL 512
Score = 130 (50.8 bits), Expect = 1.5e-36, Sum P(3) = 1.5e-36
Identities = 40/159 (25%), Positives = 72/159 (45%)
Query: 697 KERDFECSDEIASILSLLQVQDIFIKPSSGALSLKARVLRRNFEVEQG---DLLTLLNIF 753
K +C D + I ++L V+++FI+P +A R + G D TL IF
Sbjct: 501 KAASLDCEDLLLPIAAMLSVENVFIRPVDPEYQKEAEQRHRELAAKAGGFNDFATLAVIF 560
Query: 754 KFYEKQENKKQFCHKYFFNYKVLKRAAELKNQMILLLKK----SSIPLVTSPRNTNAVLK 809
+ + +C K++ +++ L A ++ Q+ L++K S P T + VL+
Sbjct: 561 EQCKSSGAPASWCQKHWIHWRCLFSAFRVEAQLRELIRKLKQQSDFPRETFEGPKHEVLR 620
Query: 810 -CLTNGFFSNAAYLHYSGVYRTVRGN-EDLYIHPSSVLY 846
CL G+F N A + T+ G ++IH + L+
Sbjct: 621 RCLCAGYFKNVARRSVGRTFCTMDGRGSPVHIHQNCKLH 659
Score = 107 (42.7 bits), Expect = 1.5e-36, Sum P(3) = 1.5e-36
Identities = 24/52 (46%), Positives = 36/52 (69%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILMECSRKFSRLYTEAS 52
MT+G L+++ DP++ K+SVI+LD+ HERT+ TDIL +K L+ E S
Sbjct: 149 MTDGCLLKHILGDPNLTKFSVIILDEAHERTLTTDILFGLLKK---LFQEKS 197
Score = 38 (18.4 bits), Expect = 2.2e-29, Sum P(3) = 2.2e-29
Identities = 11/54 (20%), Positives = 23/54 (42%)
Query: 55 QLNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRVALELLYSL 108
+ ++C+ E ++ L LG N+ +FS A + ++L+ L
Sbjct: 135 RFDDCSSKETAIKYMTDGCLLKHILGDPNLTKFSVIILDEAHERTLTTDILFGL 188
>UNIPROTKB|I3LU50 [details] [associations]
symbol:I3LU50 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
Pfam:PF00271 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 PROSITE:PS51192
GO:GO:0008026 GeneTree:ENSGT00700000104421
Ensembl:ENSSSCT00000026672 OMA:GHEVAFS Uniprot:I3LU50
Length = 265
Score = 332 (121.9 bits), Expect = 1.2e-35, Sum P(2) = 1.2e-35
Identities = 68/179 (37%), Positives = 111/179 (62%)
Query: 347 KRTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYYSNDPVVNYVQGVV 406
+R+ LKLI++SAT+DAE+ F+ N I + G +PV + +S P +YV+ V
Sbjct: 84 RRSDLKLIVTSATMDAEKFASFFG-----NVPIFHIPGRTFPVDILFSKTPQEDYVEAAV 138
Query: 407 DTAIKIHESMPVGDILAFVIGLEQIEHIIGILKQYHNQREDLKLL-ILPMHGSLPNNEQI 465
++++H S GDIL F+ G E IE + ++ + E+ L +LP++ LP++ Q
Sbjct: 139 KQSLQVHLSGAPGDILIFMPGQEDIEVTSDQIVEHLEELENAPALAVLPIYSQLPSDLQA 198
Query: 466 KVFRPTPRAMRKIVIATNIAETSITIPGIVYVIDPGFVKARWFNPNTLTNSLVVVPISK 524
K+F+ P +RK ++ATNIAETS+T+ GI++VID G+ K + FNP ++L + PIS+
Sbjct: 199 KIFQKAPDGVRKCIVATNIAETSLTVDGIMFVIDSGYCKLKVFNPRIGMDALQIYPISQ 257
Score = 231 (86.4 bits), Expect = 3.9e-18, P = 3.9e-18
Identities = 45/82 (54%), Positives = 62/82 (75%)
Query: 613 SLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTKIKYMTEGILMREMMTDPLLRKYSVIM 672
S+A RVSEE+ LG VGY IRF+DCT+E T IKYMT+GIL+RE + + L YS I+
Sbjct: 2 SVAKRVSEEMGGNLGEEVGYAIRFEDCTSES-TLIKYMTDGILLRESLREADLDHYSAII 60
Query: 673 LDEVHERTIFTDILMGLLKKIL 694
+DE HER++ TD+L GLL++++
Sbjct: 61 MDEAHERSLNTDVLFGLLREVV 82
Score = 89 (36.4 bits), Expect = 1.2e-35, Sum P(2) = 1.2e-35
Identities = 16/43 (37%), Positives = 28/43 (65%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILMECSRK 43
MT+GIL+ + ++ YS I++D+ HER++ TD+L R+
Sbjct: 38 MTDGILLRESLREADLDHYSAIIMDEAHERSLNTDVLFGLLRE 80
>ZFIN|ZDB-GENE-040426-1276 [details] [associations]
symbol:med18 "mediator of RNA polymerase II
transcription, subunit 18 homolog (yeast)" species:7955 "Danio
rerio" [GO:0001104 "RNA polymerase II transcription cofactor
activity" evidence=IEA] [GO:0016592 "mediator complex"
evidence=IEA] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] InterPro:IPR019095 Pfam:PF09637
ZFIN:ZDB-GENE-040426-1276 GO:GO:0016592 GO:GO:0001104
eggNOG:NOG262405 KO:K15135 CTD:54797 GeneTree:ENSGT00390000003312
HOGENOM:HOG000037435 HOVERGEN:HBG105560 OMA:VQLEKID
OrthoDB:EOG46Q6TJ EMBL:BC053113 IPI:IPI00503419 RefSeq:NP_956629.1
UniGene:Dr.19506 ProteinModelPortal:Q7T3H7 STRING:Q7T3H7
PRIDE:Q7T3H7 Ensembl:ENSDART00000060447 GeneID:393306
KEGG:dre:393306 InParanoid:Q7T3H7 NextBio:20814358 Bgee:Q7T3H7
Uniprot:Q7T3H7
Length = 208
Score = 383 (139.9 bits), Expect = 1.8e-34, P = 1.8e-34
Identities = 83/174 (47%), Positives = 121/174 (69%)
Query: 178 SIRGNQTQPLLLRVRRALDF--PDM--PYQLRYIGQPEMG-PLLLRVRRALDFPDMPYQL 232
S+ + LL R+R D P+ ++L Y+ + + G P +LR RR+L P +P+ L
Sbjct: 26 SVLDQSLESLLHRLRGLCDNMEPESFADHELVYLLKGQQGNPFILRARRSLLDPSVPWHL 85
Query: 233 RYIGQPEMGVGDKARPTIVRSSIDVACSCTVVEFLTEMGCRMDFEYISRGYMFRKGRMKI 292
RY+GQPE VGDK+R +VR+ +DVA S ++ +FL EMG RMD E++++G +FRKG MK+
Sbjct: 86 RYLGQPE--VGDKSRHALVRNCVDVAASHSLPDFLNEMGFRMDHEFVAKGQVFRKGVMKV 143
Query: 293 LVSKIFKMSQGKPSDSGVEPISQSYLVELSILAPGGQDVIGEDMKAFAEQLKPL 346
+VSK+ ++ +D+ EP+S SYLVELS+LAP GQD + EDM++FAEQLKPL
Sbjct: 144 VVSKLSRVLVPGNTDN-TEPLSLSYLVELSVLAPAGQDTVSEDMRSFAEQLKPL 196
Score = 226 (84.6 bits), Expect = 1.3e-17, P = 1.3e-17
Identities = 42/75 (56%), Positives = 57/75 (76%)
Query: 139 LSSGSVLDSAVEILLHRLRGLCDNVDSGPETFHDHEMCFSIRGNQTQPLLLRVRRALDFP 198
L GSVLD ++E LLHRLRGLCDN++ PE+F DHE+ + ++G Q P +LR RR+L P
Sbjct: 22 LLQGSVLDQSLESLLHRLRGLCDNME--PESFADHELVYLLKGQQGNPFILRARRSLLDP 79
Query: 199 DMPYQLRYIGQPEMG 213
+P+ LRY+GQPE+G
Sbjct: 80 SVPWHLRYLGQPEVG 94
>UNIPROTKB|G4NBP1 [details] [associations]
symbol:MGG_00523 "Pre-mRNA-splicing factor ATP-dependent
RNA helicase PRP2" species:242507 "Magnaporthe oryzae 70-15"
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:CM001235 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 RefSeq:XP_003718533.1 EnsemblFungi:MGG_00523T0
GeneID:2674513 KEGG:mgr:MGG_00523 Uniprot:G4NBP1
Length = 803
Score = 270 (100.1 bits), Expect = 3.8e-34, Sum P(3) = 3.8e-34
Identities = 71/187 (37%), Positives = 102/187 (54%)
Query: 351 LKLIISSATVDAEEICQFYNI-------SASSNATI---LSVKGHLYPVSVYYSNDPVVN 400
LK++ SAT + E + F++I A S+ L ++G +PV + +S PV
Sbjct: 301 LKVVAMSATANIETLENFFSIPQDDRKAKAESDGKAEQTLKIEGRQFPVEIIHSPKPVPV 360
Query: 401 YVQGVVDTAIKIHESMPV-GDILAFVIGLEQIEHIIGILKQYH-NQREDL-KLLILPMHG 457
VV T KIH P+ GDIL F+ G E IE I ++++Y D+ K+ LP+ G
Sbjct: 361 LADEVVKTVFKIHCGEPLPGDILVFLYGQEPIEEIQRLIEEYAATLASDVPKIKALPLFG 420
Query: 458 SLPNNEQIKVFRPTPRAMRKIVIATNIAETSITIPGIVYVIDPGFVKARWFNPNTLTNSL 517
L Q FRP +RK+V+ATNIAETS+T+PG+ YVID G K + + + SL
Sbjct: 421 QLSMEAQHTAFRPLKGRVRKVVLATNIAETSVTVPGVRYVIDTGKSKMKQYRASLGLESL 480
Query: 518 VVVPISK 524
+V ISK
Sbjct: 481 LVDAISK 487
Score = 218 (81.8 bits), Expect = 1.4e-22, Sum P(2) = 1.4e-22
Identities = 48/113 (42%), Positives = 76/113 (67%)
Query: 600 LIGITEPRRISVTSLANRVSEELRTTL---GHT----------VGYTIRFDDCTTEDVTK 646
+I +T+PRR++ T+LA+RV+ E T L G + VGY++RFD + TK
Sbjct: 182 MIAVTQPRRVAATTLAHRVAREAGTPLQPSGTSGAKPGAAEGLVGYSVRFDHNVPKG-TK 240
Query: 647 IKYMTEGILMREMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKILKDKER 699
IK++TEG+L++E++ DP LR+YS +++DEVHER I D+L G LK++L ++
Sbjct: 241 IKFLTEGMLLQELLHDPSLRQYSAVVVDEVHERGIDVDLLCGFLKQMLLSPDK 293
Score = 143 (55.4 bits), Expect = 3.3e-20, Sum P(3) = 3.3e-20
Identities = 39/133 (29%), Positives = 66/133 (49%)
Query: 39 ECSRKFSRLYTEASFSQLNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNL 98
E K RLYTE + ++ + PE+ R + A L + A G+ ++L F P +
Sbjct: 500 EAPGKCYRLYTEDVYKEMRDADLPEILRNNVREAALIMMARGVDDLLTFPLMDTPKISRM 559
Query: 99 RVALELLYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLLSSGSVLDSAVEILLHRLRG 158
A+ L LGA+D G +T+ +G+ MA +P+ +VLL++ S A + LL +
Sbjct: 560 EKAMVQLNILGAIDDEGAITE-LGKKMARLPVAAPLGRVLLAAAS---PAYDCLLEVI-D 614
Query: 159 LCDNVDSGPETFH 171
+ + G + FH
Sbjct: 615 IISCISGGDDIFH 627
Score = 132 (51.5 bits), Expect = 3.8e-34, Sum P(3) = 3.8e-34
Identities = 42/170 (24%), Positives = 73/170 (42%)
Query: 701 FECSDEIASILSLLQV-QDIFIKPSSGALSLKARVLRRNFEVEQGDLLTLLNIFKFYEKQ 759
++C E+ I+S + DIF + S + RR +GDL+ L + Y +
Sbjct: 606 YDCLLEVIDIISCISGGDDIFHQLQSEEAREEVEEYRRELRRREGDLMVYLTTMQMYTAE 665
Query: 760 ENKK-QFCHKYFFNYKVLKRAAELKNQMILLLKKSSI----------PLVT-SPRNTNAV 807
+ + ++C K N + +++A ++ Q+ L + P V SP +
Sbjct: 666 NSDRTEWCKKRKINLRTMRQALNIRRQLRSLCVSEGMLTEKPPPDPQPFVPLSPEAAETI 725
Query: 808 LKCLTNGFFSNAAYLHYSGVYRTVRGNEDLYIHPSSVLYTLQQPQCTHLE 857
KC GF ++ A L Y T +G + IHPSS L+ ++ LE
Sbjct: 726 TKCFMKGFCTSTAMLAPDLSYVTSQGKHVVAIHPSSSLHGQKKEAIMFLE 775
Score = 102 (41.0 bits), Expect = 3.8e-34, Sum P(3) = 3.8e-34
Identities = 18/37 (48%), Positives = 29/37 (78%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDIL 37
+TEG+L++ HDPS+ +YS +++D+VHER I D+L
Sbjct: 244 LTEGMLLQELLHDPSLRQYSAVVVDEVHERGIDVDLL 280
>TAIR|locus:2010549 [details] [associations]
symbol:AT1G27900 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0006310 "DNA recombination"
evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0007126 "meiosis" evidence=RCA] [GO:0007131 "reciprocal meiotic
recombination" evidence=RCA] [GO:0010332 "response to gamma
radiation" evidence=RCA] [GO:0010413 "glucuronoxylan metabolic
process" evidence=RCA] [GO:0032204 "regulation of telomere
maintenance" evidence=RCA] [GO:0033044 "regulation of chromosome
organization" evidence=RCA] [GO:0042138 "meiotic DNA double-strand
break formation" evidence=RCA] [GO:0043247 "telomere maintenance in
response to DNA damage" evidence=RCA] [GO:0045132 "meiotic
chromosome segregation" evidence=RCA] [GO:0045492 "xylan
biosynthetic process" evidence=RCA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003593 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 EMBL:CP002684
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 KO:K12818 EMBL:AY054692
EMBL:AY128718 IPI:IPI00545738 RefSeq:NP_564296.1 UniGene:At.25438
ProteinModelPortal:Q93Y16 SMR:Q93Y16 PaxDb:Q93Y16 PRIDE:Q93Y16
EnsemblPlants:AT1G27900.1 GeneID:839683 KEGG:ath:AT1G27900
TAIR:At1g27900 InParanoid:Q93Y16 OMA:NCRRFIV PhylomeDB:Q93Y16
ProtClustDB:CLSN2688039 ArrayExpress:Q93Y16 Genevestigator:Q93Y16
Uniprot:Q93Y16
Length = 700
Score = 367 (134.2 bits), Expect = 8.3e-34, Sum P(2) = 8.3e-34
Identities = 81/220 (36%), Positives = 131/220 (59%)
Query: 311 EPISQSYLVELS--ILAPGGQDVIGED-MKAFAEQLKPLKRTQLKLIISSATVDAEEICQ 367
E +S L + S IL + + D + ++L ++ + K++I+SAT+D E++ +
Sbjct: 108 ESLSNPMLDDYSVIILDEAHERSLNTDILLGLVKRLVRIRASNFKVLITSATLDGEKVSE 167
Query: 368 FYNISASSNATILSVKGHLYPVSVYYSNDPVVNYVQGVVDTAIKIHESMPVGDILAFVIG 427
F+ S +L+V G LYPV + YS + V+Y++ + AI IH P GDIL F+ G
Sbjct: 168 FF-----SGCPVLNVPGKLYPVEILYSKERPVSYIESSLKVAIDIHVREPEGDILIFMTG 222
Query: 428 LEQIEHIIGILKQYHNQRED---LKLLILPMHGSLPNNEQIKVFRPTPRAMRKIVIATNI 484
+ IE ++ L++ + + +I P+HGSLP Q++VF P P R+ +++TNI
Sbjct: 223 QDDIEKLVSRLEEKVRSLAEGSCMDAIIYPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNI 282
Query: 485 AETSITIPGIVYVIDPGFVKARWFNPNTLTNSLVVVPISK 524
AETS+T+ G+VYVID G+VK R +NP++ SL V+ ISK
Sbjct: 283 AETSLTVDGVVYVIDSGYVKQRQYNPSSGMFSLDVIQISK 322
Score = 282 (104.3 bits), Expect = 4.2e-21, P = 4.2e-21
Identities = 52/103 (50%), Positives = 81/103 (78%)
Query: 600 LIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTKIKYMTEGILMREM 659
+I IT+PRR++ S+A RV++EL LG VGY IRF+D TT T+IKY+T+G+L+RE
Sbjct: 51 VIAITQPRRVAAVSVARRVAQELDVPLGEDVGYAIRFEDRTTSK-TRIKYLTDGVLLRES 109
Query: 660 MTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKILKDKERDFE 702
+++P+L YSVI+LDE HER++ TDIL+GL+K++++ + +F+
Sbjct: 110 LSNPMLDDYSVIILDEAHERSLNTDILLGLVKRLVRIRASNFK 152
Score = 169 (64.5 bits), Expect = 7.9e-09, P = 7.9e-09
Identities = 48/153 (31%), Positives = 82/153 (53%)
Query: 7 IENDDHDPSVEKYS--VIMLDKVHERTIFTDILMECSRKFSRLYTEASF-SQLNECTPPE 63
++ ++PS +S VI + KV K RLY A + + T PE
Sbjct: 301 VKQRQYNPSSGMFSLDVIQISKVQANQRAGRAGRTRPGKCYRLYPLAVYRDDFLDATIPE 360
Query: 64 MQRTELSSAVLQLKALGIHNI--LRFSFPSPPPAQNLRVALELLYSLGAMDVNGNLTKPV 121
+QRT L+ +VL LK+L + +I L+F F P +++L AL+ LY + A+D NG +T+ +
Sbjct: 361 IQRTSLAGSVLYLKSLDLPDIDILKFDFLDAPSSESLEDALKQLYFIDAIDENGAITR-I 419
Query: 122 GETMAEMPLHPIHAKVLLSSGSV--LDSAVEIL 152
G TM+++PL P ++ L+ + L A+ ++
Sbjct: 420 GRTMSDLPLEPSLSRTLIEANETGCLSQALTVV 452
Score = 114 (45.2 bits), Expect = 4.8e-06, Sum P(2) = 4.8e-06
Identities = 37/152 (24%), Positives = 72/152 (47%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILMECSRKFSRLYTEASFSQL-NEC 59
+T+G+L+ +P ++ YSVI+LD+ HER++ TDIL+ ++ R+ ++F L
Sbjct: 100 LTDGVLLRESLSNPMLDDYSVIILDEAHERSLNTDILLGLVKRLVRIRA-SNFKVLITSA 158
Query: 60 TPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRVALELLYSLGAMDVNGN-LT 118
T + +E S L G + + P + +L++ + + G+ L
Sbjct: 159 TLDGEKVSEFFSGCPVLNVPGKLYPVEILYSKERPVSYIESSLKVAIDIHVREPEGDILI 218
Query: 119 KPVGETMAEMPLHPIHAKVL-LSSGSVLDSAV 149
G+ E + + KV L+ GS +D+ +
Sbjct: 219 FMTGQDDIEKLVSRLEEKVRSLAEGSCMDAII 250
Score = 79 (32.9 bits), Expect = 8.3e-34, Sum P(2) = 8.3e-34
Identities = 52/250 (20%), Positives = 107/250 (42%)
Query: 618 VSEELRTTLGHTVGYTIRFDDCTTEDVTKIKYMTEGILMREMMTDPLLRKYSVIMLDEVH 677
+ E RT+L +V Y ++ D D+ K ++ E + D L + Y + +DE
Sbjct: 358 IPEIQRTSLAGSVLY-LKSLDLPDIDILKFDFLDAP--SSESLEDALKQLYFIDAIDENG 414
Query: 678 ERT----IFTDILM--GLLKKILKDKERDFECSDEIASILSLLQVQDIFIKPSSGALSLK 731
T +D+ + L + +++ E C + +++++L + + P+ S K
Sbjct: 415 AITRIGRTMSDLPLEPSLSRTLIEANETG--CLSQALTVVAMLSAETTLL-PARSKPSEK 471
Query: 732 ARVLRRNFEVEQG----DLLTLLNIFKFYEKQENKKQFCHKYFFNYKVLKRAAELKNQMI 787
R + + G D + LL IF+ +++ +C + + + +++ Q+
Sbjct: 472 KRKHDEDSNLPNGSGYGDHIQLLQIFESWDRTNYDPVWCKENGMQVRGMVFVKDVRRQLC 531
Query: 788 LLLKKSSIPLV--------TSPRNTNAVLK---CLTNGFFSNAAYLHYSGVYRTVRGNED 836
+++K S + +S R+ L+ C+ N L ++G YRT+
Sbjct: 532 QIMQKISKDRLEVGADGRKSSSRDDYRKLRKALCVGNANQIAERMLRHNG-YRTLSFQSQ 590
Query: 837 LY-IHPSSVL 845
L +HPSSVL
Sbjct: 591 LVQVHPSSVL 600
>UNIPROTKB|C9JEW8 [details] [associations]
symbol:DHX40 "Probable ATP-dependent RNA helicase DHX40"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 HGNC:HGNC:18018 ChiTaRS:DHX40 EMBL:AC091271
EMBL:AC004167 IPI:IPI00789290 ProteinModelPortal:C9JEW8 SMR:C9JEW8
STRING:C9JEW8 Ensembl:ENST00000451169 ArrayExpress:C9JEW8
Bgee:C9JEW8 Uniprot:C9JEW8
Length = 731
Score = 302 (111.4 bits), Expect = 1.2e-33, Sum P(2) = 1.2e-33
Identities = 54/98 (55%), Positives = 80/98 (81%)
Query: 600 LIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTKIKYMTEGILMREM 659
+IG+T+PR+++ S+A RV+EE++ TLG VGY +RFDDC++++ T IKYMT+G L++ +
Sbjct: 1 MIGVTQPRKVAAISVAQRVAEEMKCTLGSKVGYQVRFDDCSSKE-TAIKYMTDGCLLKHI 59
Query: 660 MTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKILKDK 697
+ DP L K+SVI+LDE HERT+ TDIL GLLKK+ ++K
Sbjct: 60 LGDPNLTKFSVIILDEAHERTLTTDILFGLLKKLFQEK 97
Score = 165 (63.1 bits), Expect = 6.3e-25, Sum P(3) = 6.3e-25
Identities = 43/117 (36%), Positives = 69/117 (58%)
Query: 41 SRKFSRLYTEASFSQLNECTP----PEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQ 96
S K R+Y++ + N+C P PE++RT L+S VL LK L IH+++RF + PP +
Sbjct: 354 SGKCFRIYSKDFW---NQCMPDHVIPEIKRTSLTSVVLTLKCLAIHDVIRFPYLDPPNER 410
Query: 97 NLRVALELLYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLLSSGSVLDSAVEILL 153
+ AL+ LY A+D +G++T+ +G +M E PL P H + + LD ++LL
Sbjct: 411 LILEALKQLYQCDAIDRSGHVTR-LGLSMVEFPLPP-HLTCAVIKAASLDCE-DLLL 464
Score = 162 (62.1 bits), Expect = 1.3e-24, Sum P(3) = 1.3e-24
Identities = 41/105 (39%), Positives = 57/105 (54%)
Query: 462 NEQIKVFRPTPRAMRKIVIATNIAETSITIPGIVYVIDPGFVKARWFNPNTLTNSLVVVP 521
N+Q ++F P P +RK VI+TNI+ TS+TI GI YV+D GFVK NP + L VVP
Sbjct: 277 NQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEVVP 336
Query: 522 ISKXXXXXXXXXXXXXXXXHVYRKNFMYNRLFIHFCVSRN-IPTI 565
ISK +R +Y++ F + C+ + IP I
Sbjct: 337 ISKSEALQRSGRAGRTSSGKCFR---IYSKDFWNQCMPDHVIPEI 378
Score = 148 (57.2 bits), Expect = 1.2e-33, Sum P(2) = 1.2e-33
Identities = 43/159 (27%), Positives = 74/159 (46%)
Query: 697 KERDFECSDEIASILSLLQVQDIFIKPSSGALSLKARVLRRNFEVEQG---DLLTLLNIF 753
K +C D + I ++L V+++FI+P +A R + G D TL IF
Sbjct: 453 KAASLDCEDLLLPIAAMLSVENVFIRPVDPEYQKEAEQRHRELAAKAGGFNDFATLAVIF 512
Query: 754 KFYEKQENKKQFCHKYFFNYKVLKRAAELKNQMILLLKK----SSIPLVTSPRNTNAVLK 809
+ + +C K++ +++ L A ++ Q+ L++K S P T + VL+
Sbjct: 513 EQCKSSGAPASWCQKHWIHWRCLFSAFRVEAQLRELIRKLKQQSDFPKETFEGPKHEVLR 572
Query: 810 -CLTNGFFSNAAYLHYSGVYRTVRGN-EDLYIHPSSVLY 846
CL G+F N A + T+ G ++IHPSS L+
Sbjct: 573 RCLCAGYFKNVARRSVGRTFCTMDGRGSPVHIHPSSALH 611
Score = 148 (57.2 bits), Expect = 4.5e-23, Sum P(3) = 4.5e-23
Identities = 51/183 (27%), Positives = 83/183 (45%)
Query: 330 DVIGEDMKAFAEQLKPLKRTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPV 389
D++ +K ++ P ++ LK+++ SAT++ ++ F+ N I + G LYPV
Sbjct: 84 DILFGLLKKLFQEKSPNRKEHLKVVVMSATMELAKLSAFFG-----NCPIFDIPGRLYPV 138
Query: 390 SVYYSN--DPV----VNYVQGVVDTAIKIHESMPVGDILAFVIGLEQIEHIIGILKQ--- 440
+ N P Y+Q +V + IH + GDIL F+ G +IE +L Q
Sbjct: 139 REKFCNLIGPRDRENTAYIQAIVKVTMDIHLNEMAGDILVFLTGQFEIEKSCELLFQMAE 198
Query: 441 ---YHNQREDLKL---LILPMHGSLPNNEQIKVFRPTPRAMRKIVIATNIAETSITIPGI 494
Y +D L LILP +GS+ Q + T + K + + T +TI GI
Sbjct: 199 SVDYDYDVQDTTLDGLLILPCYGSMTTVSQTSLTFVTHIQIMKQISENQHSLTGLTIAGI 258
Query: 495 VYV 497
V
Sbjct: 259 TGV 261
Score = 107 (42.7 bits), Expect = 6.3e-25, Sum P(3) = 6.3e-25
Identities = 24/52 (46%), Positives = 36/52 (69%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILMECSRKFSRLYTEAS 52
MT+G L+++ DP++ K+SVI+LD+ HERT+ TDIL +K L+ E S
Sbjct: 50 MTDGCLLKHILGDPNLTKFSVIILDEAHERTLTTDILFGLLKK---LFQEKS 98
Score = 38 (18.4 bits), Expect = 1.7e-17, Sum P(3) = 1.7e-17
Identities = 11/54 (20%), Positives = 23/54 (42%)
Query: 55 QLNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRVALELLYSL 108
+ ++C+ E ++ L LG N+ +FS A + ++L+ L
Sbjct: 36 RFDDCSSKETAIKYMTDGCLLKHILGDPNLTKFSVIILDEAHERTLTTDILFGL 89
>UNIPROTKB|Q5THQ9 [details] [associations]
symbol:DHX35 "Probable ATP-dependent RNA helicase DHX35"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR002464
PROSITE:PS00690 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 EMBL:AL023803
UniGene:Hs.444520 HGNC:HGNC:15861 IPI:IPI01009669 SMR:Q5THQ9
Ensembl:ENST00000441485 HOGENOM:HOG000202213 HOVERGEN:HBG079487
Uniprot:Q5THQ9
Length = 302
Score = 375 (137.1 bits), Expect = 1.3e-33, P = 1.3e-33
Identities = 67/112 (59%), Positives = 90/112 (80%)
Query: 586 FQYLLEAGWCYDTKLIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVT 645
F+YL EAGW + +++G+T+PRR++ ++A RV+EE LGH VGY IRFDDCT + T
Sbjct: 53 FKYLAEAGWTAEGRVVGVTQPRRVAAVTVAGRVAEERGAVLGHEVGYCIRFDDCTDQLAT 112
Query: 646 KIKYMTEGILMREMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKILKDK 697
+IK++T+G+L+REMM DPLL KYSVIMLDE HERT++TDI +GLLKKI K +
Sbjct: 113 RIKFLTDGMLVREMMVDPLLTKYSVIMLDEAHERTLYTDIAIGLLKKIQKKR 164
Score = 255 (94.8 bits), Expect = 8.9e-30, Sum P(2) = 8.9e-30
Identities = 53/140 (37%), Positives = 90/140 (64%)
Query: 347 KRTQLKLIISSATVDAEEICQFYNISASSN-----ATILSVKGHLYPVSVYYSNDPVVNY 401
KR L+LI++SAT+DA++ F+N + +S+ IL+V+G +PV ++Y PV +Y
Sbjct: 163 KRGDLRLIVASATLDADKFRDFFNQNETSDPARDTCVILTVEGRTFPVDIFYLQSPVPDY 222
Query: 402 VQGVVDTAIKIHESMPVGDILAFVIGLEQIEHIIGILKQYHNQ--REDLK--LLILPMHG 457
++ V+T +KIH++ GD+LAF+ G E++E ++ +L + R +K L +LPM+
Sbjct: 223 IKSTVETVVKIHQTEGDGDVLAFLTGQEEVETVVSMLIEQARALARTGMKRHLRVLPMYA 282
Query: 458 SLPNNEQIKVFRPTPRAMRK 477
LP+ EQ+KVF R++RK
Sbjct: 283 GLPSFEQMKVFERVSRSVRK 302
Score = 112 (44.5 bits), Expect = 8.9e-30, Sum P(2) = 8.9e-30
Identities = 21/46 (45%), Positives = 32/46 (69%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILMECSRKFSR 46
+T+G+L+ DP + KYSVIMLD+ HERT++TDI + +K +
Sbjct: 117 LTDGMLVREMMVDPLLTKYSVIMLDEAHERTLYTDIAIGLLKKIQK 162
>UNIPROTKB|Q9BUE0 [details] [associations]
symbol:MED18 "Mediator of RNA polymerase II transcription
subunit 18" species:9606 "Homo sapiens" [GO:0001104 "RNA polymerase
II transcription cofactor activity" evidence=IEA] [GO:0016592
"mediator complex" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR019095 Pfam:PF09637 Reactome:REACT_111045
EMBL:CH471059 EMBL:AL353622 GO:GO:0016592 GO:GO:0001104
eggNOG:NOG262405 KO:K15135 CTD:54797 HOVERGEN:HBG105560 OMA:VQLEKID
OrthoDB:EOG46Q6TJ EMBL:AB107222 EMBL:AK000052 EMBL:BC002694
IPI:IPI00305986 RefSeq:NP_001120822.1 RefSeq:NP_060108.2
UniGene:Hs.479911 ProteinModelPortal:Q9BUE0 IntAct:Q9BUE0
STRING:Q9BUE0 PhosphoSite:Q9BUE0 DMDM:74752353 PaxDb:Q9BUE0
PeptideAtlas:Q9BUE0 PRIDE:Q9BUE0 DNASU:54797
Ensembl:ENST00000373842 Ensembl:ENST00000398997 GeneID:54797
KEGG:hsa:54797 UCSC:uc001bpt.4 GeneCards:GC01P028666
H-InvDB:HIX0000293 HGNC:HGNC:25944 HPA:HPA027429 MIM:612384
neXtProt:NX_Q9BUE0 PharmGKB:PA134884523 InParanoid:Q9BUE0
PhylomeDB:Q9BUE0 GenomeRNAi:54797 NextBio:57479 ArrayExpress:Q9BUE0
Bgee:Q9BUE0 CleanEx:HS_MED18 Genevestigator:Q9BUE0 Uniprot:Q9BUE0
Length = 208
Score = 368 (134.6 bits), Expect = 7.7e-33, P = 7.7e-33
Identities = 80/175 (45%), Positives = 120/175 (68%)
Query: 178 SIRGNQTQPLLLRVRRALDF--PD--MPYQLRYI--GQPEMGPLLLRVRRALDFPDMPYQ 231
S+ + + L+ R+R D P+ + +++ ++ GQ + P +LR RR++D P+
Sbjct: 26 SVLDHSLESLIHRLRGLCDNMEPETFLDHEMVFLLKGQ-QASPFVLRARRSMDRAGAPWH 84
Query: 232 LRYIGQPEMGVGDKARPTIVRSSIDVACSCTVVEFLTEMGCRMDFEYISRGYMFRKGRMK 291
LRY+GQPEMG DK R +VR+ +D+A S + +FL EMG RMD E++++G++FRKG MK
Sbjct: 85 LRYLGQPEMG--DKNRHALVRNCVDIATSENLTDFLMEMGFRMDHEFVAKGHLFRKGIMK 142
Query: 292 ILVSKIFKMSQGKPSDSGVEPISQSYLVELSILAPGGQDVIGEDMKAFAEQLKPL 346
I+V KIF++ +DS E +S SYLVELS++AP GQD++ +DMK FAEQLKPL
Sbjct: 143 IMVYKIFRILVPGNTDS-TEALSLSYLVELSVVAPAGQDMVSDDMKNFAEQLKPL 196
Score = 235 (87.8 bits), Expect = 1.4e-18, P = 1.4e-18
Identities = 47/90 (52%), Positives = 61/90 (67%)
Query: 124 TMAEMPLHPIHAKVLLSSGSVLDSAVEILLHRLRGLCDNVDSGPETFHDHEMCFSIRGNQ 183
TM + I+ L GSVLD ++E L+HRLRGLCDN++ PETF DHEM F ++G Q
Sbjct: 7 TMMPVTGGTINMMEYLLQGSVLDHSLESLIHRLRGLCDNME--PETFLDHEMVFLLKGQQ 64
Query: 184 TQPLLLRVRRALDFPDMPYQLRYIGQPEMG 213
P +LR RR++D P+ LRY+GQPEMG
Sbjct: 65 ASPFVLRARRSMDRAGAPWHLRYLGQPEMG 94
>UNIPROTKB|Q0VCD4 [details] [associations]
symbol:MED18 "Mediator of RNA polymerase II transcription
subunit 18" species:9913 "Bos taurus" [GO:0016592 "mediator
complex" evidence=IEA] [GO:0001104 "RNA polymerase II transcription
cofactor activity" evidence=IEA] InterPro:IPR019095 Pfam:PF09637
GO:GO:0016592 GO:GO:0001104 eggNOG:NOG262405 KO:K15135
EMBL:BC120223 IPI:IPI00713723 RefSeq:NP_001069703.1
UniGene:Bt.27848 ProteinModelPortal:Q0VCD4 STRING:Q0VCD4
Ensembl:ENSBTAT00000003468 GeneID:540695 KEGG:bta:540695 CTD:54797
GeneTree:ENSGT00390000003312 HOGENOM:HOG000037435
HOVERGEN:HBG105560 InParanoid:Q0VCD4 OMA:VQLEKID OrthoDB:EOG46Q6TJ
NextBio:20878779 Uniprot:Q0VCD4
Length = 208
Score = 365 (133.5 bits), Expect = 1.6e-32, P = 1.6e-32
Identities = 80/175 (45%), Positives = 120/175 (68%)
Query: 178 SIRGNQTQPLLLRVRRALDF--PD--MPYQLRYI--GQPEMGPLLLRVRRALDFPDMPYQ 231
S+ + + L+ R+R D P+ + +++ ++ GQ + P +LR RR+LD P+
Sbjct: 26 SVLDHSLESLIHRLRGLCDNMEPETFVDHEMVFLLKGQ-QASPFVLRARRSLDRAGAPWH 84
Query: 232 LRYIGQPEMGVGDKARPTIVRSSIDVACSCTVVEFLTEMGCRMDFEYISRGYMFRKGRMK 291
LRY+GQPEMG DK R +VR+ +D+A S + +FL EMG RMD E+++RG++FRKG MK
Sbjct: 85 LRYLGQPEMG--DKNRHALVRNCVDIATSENLTDFLMEMGFRMDHEFVARGHLFRKGIMK 142
Query: 292 ILVSKIFKMSQGKPSDSGVEPISQSYLVELSILAPGGQDVIGEDMKAFAEQLKPL 346
I+V KIF++ +D+ E +S SYLVELS++AP GQD++ +DM+ FAEQLKPL
Sbjct: 143 IVVYKIFRILVPGNTDN-TEALSLSYLVELSVVAPAGQDMVSDDMRNFAEQLKPL 196
Score = 237 (88.5 bits), Expect = 8.8e-19, P = 8.8e-19
Identities = 48/90 (53%), Positives = 61/90 (67%)
Query: 124 TMAEMPLHPIHAKVLLSSGSVLDSAVEILLHRLRGLCDNVDSGPETFHDHEMCFSIRGNQ 183
TM + I+ L GSVLD ++E L+HRLRGLCDN++ PETF DHEM F ++G Q
Sbjct: 7 TMMPVTGGTINMMEYLLQGSVLDHSLESLIHRLRGLCDNME--PETFVDHEMVFLLKGQQ 64
Query: 184 TQPLLLRVRRALDFPDMPYQLRYIGQPEMG 213
P +LR RR+LD P+ LRY+GQPEMG
Sbjct: 65 ASPFVLRARRSLDRAGAPWHLRYLGQPEMG 94
>UNIPROTKB|I3LR60 [details] [associations]
symbol:MED18 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016592 "mediator complex" evidence=IEA] [GO:0001104
"RNA polymerase II transcription cofactor activity" evidence=IEA]
InterPro:IPR019095 Pfam:PF09637 GO:GO:0016592 GO:GO:0001104
KO:K15135 GeneTree:ENSGT00390000003312 OMA:VQLEKID EMBL:FP312758
RefSeq:XP_003356288.1 Ensembl:ENSSSCT00000028982 GeneID:100621177
KEGG:ssc:100621177 Uniprot:I3LR60
Length = 208
Score = 364 (133.2 bits), Expect = 2.1e-32, P = 2.1e-32
Identities = 79/175 (45%), Positives = 120/175 (68%)
Query: 178 SIRGNQTQPLLLRVRRALDF--PD--MPYQLRYI--GQPEMGPLLLRVRRALDFPDMPYQ 231
S+ + + L+ R+R D P+ + +++ ++ GQ + P +LR RR++D P+
Sbjct: 26 SVLDHSLESLIHRLRGLCDNMEPETFLDHEMVFLLKGQ-QASPFVLRARRSMDRTGAPWH 84
Query: 232 LRYIGQPEMGVGDKARPTIVRSSIDVACSCTVVEFLTEMGCRMDFEYISRGYMFRKGRMK 291
LRY+GQPEMG DK R +VR+ +D+A S + +FL EMG RMD E++++G++FRKG MK
Sbjct: 85 LRYLGQPEMG--DKNRHALVRNCVDIATSENLTDFLMEMGFRMDHEFVAKGHLFRKGIMK 142
Query: 292 ILVSKIFKMSQGKPSDSGVEPISQSYLVELSILAPGGQDVIGEDMKAFAEQLKPL 346
I+V KIF++ +DS E +S SYLVELS++AP GQD++ +DM+ FAEQLKPL
Sbjct: 143 IVVYKIFRILVPGNTDS-TEALSLSYLVELSVVAPAGQDMVSDDMRNFAEQLKPL 196
Score = 235 (87.8 bits), Expect = 1.4e-18, P = 1.4e-18
Identities = 47/90 (52%), Positives = 61/90 (67%)
Query: 124 TMAEMPLHPIHAKVLLSSGSVLDSAVEILLHRLRGLCDNVDSGPETFHDHEMCFSIRGNQ 183
TM + I+ L GSVLD ++E L+HRLRGLCDN++ PETF DHEM F ++G Q
Sbjct: 7 TMMPVTGGTINMMEYLLQGSVLDHSLESLIHRLRGLCDNME--PETFLDHEMVFLLKGQQ 64
Query: 184 TQPLLLRVRRALDFPDMPYQLRYIGQPEMG 213
P +LR RR++D P+ LRY+GQPEMG
Sbjct: 65 ASPFVLRARRSMDRTGAPWHLRYLGQPEMG 94
>UNIPROTKB|J9P4L8 [details] [associations]
symbol:MED18 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016592 "mediator complex" evidence=IEA]
[GO:0001104 "RNA polymerase II transcription cofactor activity"
evidence=IEA] InterPro:IPR019095 Pfam:PF09637 GO:GO:0016592
GO:GO:0001104 KO:K15135 CTD:54797 GeneTree:ENSGT00390000003312
OMA:VQLEKID EMBL:AAEX03001701 EMBL:AAEX03001702 RefSeq:XP_544460.1
Ensembl:ENSCAFT00000048413 GeneID:487334 KEGG:cfa:487334
Uniprot:J9P4L8
Length = 208
Score = 364 (133.2 bits), Expect = 2.1e-32, P = 2.1e-32
Identities = 79/175 (45%), Positives = 120/175 (68%)
Query: 178 SIRGNQTQPLLLRVRRALDF--PD--MPYQLRYI--GQPEMGPLLLRVRRALDFPDMPYQ 231
S+ + + L+ R+R D P+ + +++ ++ GQ + P +LR RR++D P+
Sbjct: 26 SVLDHSLESLIHRLRGLCDNMEPETFLDHEMVFLLKGQ-QASPFVLRARRSMDRGGAPWH 84
Query: 232 LRYIGQPEMGVGDKARPTIVRSSIDVACSCTVVEFLTEMGCRMDFEYISRGYMFRKGRMK 291
LRY+GQPEMG DK R +VR+ +D+A S + +FL EMG RMD E++++G++FRKG MK
Sbjct: 85 LRYLGQPEMG--DKNRHALVRNCVDIATSENLTDFLMEMGFRMDHEFVAKGHLFRKGIMK 142
Query: 292 ILVSKIFKMSQGKPSDSGVEPISQSYLVELSILAPGGQDVIGEDMKAFAEQLKPL 346
I+V KIF++ +DS E +S SYLVELS++AP GQD++ +DM+ FAEQLKPL
Sbjct: 143 IMVYKIFRILVPGNTDS-TEALSLSYLVELSVVAPAGQDMVSDDMRNFAEQLKPL 196
Score = 234 (87.4 bits), Expect = 1.9e-18, P = 1.9e-18
Identities = 47/90 (52%), Positives = 61/90 (67%)
Query: 124 TMAEMPLHPIHAKVLLSSGSVLDSAVEILLHRLRGLCDNVDSGPETFHDHEMCFSIRGNQ 183
TM + I+ L GSVLD ++E L+HRLRGLCDN++ PETF DHEM F ++G Q
Sbjct: 7 TMMPVTGGTINMMEYLLQGSVLDHSLESLIHRLRGLCDNME--PETFLDHEMVFLLKGQQ 64
Query: 184 TQPLLLRVRRALDFPDMPYQLRYIGQPEMG 213
P +LR RR++D P+ LRY+GQPEMG
Sbjct: 65 ASPFVLRARRSMDRGGAPWHLRYLGQPEMG 94
>MGI|MGI:1914469 [details] [associations]
symbol:Med18 "mediator of RNA polymerase II transcription,
subunit 18 homolog (yeast)" species:10090 "Mus musculus"
[GO:0001104 "RNA polymerase II transcription cofactor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0016592 "mediator complex" evidence=ISA;IDA]
InterPro:IPR019095 Pfam:PF09637 MGI:MGI:1914469 GO:GO:0005654
Reactome:REACT_127416 EMBL:AL805897 Reactome:REACT_27166
GO:GO:0016592 GO:GO:0001104 eggNOG:NOG262405 KO:K15135 CTD:54797
GeneTree:ENSGT00390000003312 HOGENOM:HOG000037435
HOVERGEN:HBG105560 OMA:VQLEKID OrthoDB:EOG46Q6TJ EMBL:AK012886
EMBL:AK159696 EMBL:BC068306 IPI:IPI00112230 RefSeq:NP_080315.1
UniGene:Mm.45929 ProteinModelPortal:Q9CZ82 IntAct:Q9CZ82
STRING:Q9CZ82 PhosphoSite:Q9CZ82 PaxDb:Q9CZ82 PRIDE:Q9CZ82
Ensembl:ENSMUST00000102567 GeneID:67219 KEGG:mmu:67219
UCSC:uc008vbi.2 InParanoid:Q9CZ82 NextBio:323916 Bgee:Q9CZ82
Genevestigator:Q9CZ82 Uniprot:Q9CZ82
Length = 208
Score = 363 (132.8 bits), Expect = 2.6e-32, P = 2.6e-32
Identities = 78/175 (44%), Positives = 120/175 (68%)
Query: 178 SIRGNQTQPLLLRVRRALDF--PD--MPYQLRYI--GQPEMGPLLLRVRRALDFPDMPYQ 231
S+ + + L+ R+R D P+ + +++ ++ GQ + P +LR RR++D P+
Sbjct: 26 SVLDHSLESLIHRLRGLCDNMEPETFLDHEMVFLLKGQ-QASPFVLRARRSMDRAGAPWH 84
Query: 232 LRYIGQPEMGVGDKARPTIVRSSIDVACSCTVVEFLTEMGCRMDFEYISRGYMFRKGRMK 291
LRY+GQPEMG DK R +VR+ +D+A S + +FL EMG RMD E++++G++FRKG MK
Sbjct: 85 LRYLGQPEMG--DKNRHALVRNCVDIATSENLTDFLMEMGFRMDHEFVAKGHLFRKGIMK 142
Query: 292 ILVSKIFKMSQGKPSDSGVEPISQSYLVELSILAPGGQDVIGEDMKAFAEQLKPL 346
++V KIF++ +DS E +S SYLVELS++AP GQD++ +DM+ FAEQLKPL
Sbjct: 143 VVVYKIFRILVPGNTDS-TEALSLSYLVELSVVAPAGQDMVSDDMRNFAEQLKPL 196
Score = 235 (87.8 bits), Expect = 1.4e-18, P = 1.4e-18
Identities = 47/90 (52%), Positives = 61/90 (67%)
Query: 124 TMAEMPLHPIHAKVLLSSGSVLDSAVEILLHRLRGLCDNVDSGPETFHDHEMCFSIRGNQ 183
TM + I+ L GSVLD ++E L+HRLRGLCDN++ PETF DHEM F ++G Q
Sbjct: 7 TMMPVTGGTINMMEYLLQGSVLDHSLESLIHRLRGLCDNME--PETFLDHEMVFLLKGQQ 64
Query: 184 TQPLLLRVRRALDFPDMPYQLRYIGQPEMG 213
P +LR RR++D P+ LRY+GQPEMG
Sbjct: 65 ASPFVLRARRSMDRAGAPWHLRYLGQPEMG 94
>SGD|S000001561 [details] [associations]
symbol:DHR2 "Predominantly nucleolar DEAH-box ATP-dependent
RNA helicase" species:4932 "Saccharomyces cerevisiae" [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0003724 "RNA helicase activity"
evidence=IDA] [GO:0042254 "ribosome biogenesis" evidence=IDA;TAS]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 SGD:S000001561 GO:GO:0005524 GO:GO:0005730
EMBL:BK006944 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 GeneTree:ENSGT00700000104393
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
GO:GO:0003724 GO:GO:0000462 EMBL:AF005090 EMBL:L15328 EMBL:X75560
EMBL:Z28078 PIR:S37903 RefSeq:NP_012845.1 ProteinModelPortal:P36009
SMR:P36009 DIP:DIP-6424N IntAct:P36009 MINT:MINT-677951
STRING:P36009 PaxDb:P36009 PeptideAtlas:P36009 EnsemblFungi:YKL078W
GeneID:853784 KEGG:sce:YKL078W CYGD:YKL078w KO:K14781 OMA:PGQEEID
OrthoDB:EOG4F7RTB NextBio:974906 Genevestigator:P36009
GermOnline:YKL078W Uniprot:P36009
Length = 735
Score = 279 (103.3 bits), Expect = 2.3e-31, Sum P(4) = 2.3e-31
Identities = 69/199 (34%), Positives = 114/199 (57%)
Query: 331 VIGEDMKAFAEQLKPLKRTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVS 390
V+ + + F + L R L++I+ SAT+ AE+ +F+N NA IL V+G + V
Sbjct: 210 VLTDLILGFLKSLIQGPRPDLRIIVMSATLQAEKFSEFFN-----NAPILFVEGRKFDVK 264
Query: 391 VYYSNDPVVNYVQGVVDTAIKIHESMPVGDILAFVIGLEQIEHIIGILKQ---YHNQRED 447
YY P + V V+ I+I++ +GDIL F+ G E+I+ + I+++ Y +
Sbjct: 265 QYYLKAPTDDIVDAVIRCCIQINQGEELGDILCFLPGQEEIDKAVTIMEKIAKYVSDEAP 324
Query: 448 LKLLI-LPMHGSLPNNEQIKVFRPTPRAMRKIVIATNIAETSITIPGIVYVIDPGFVKAR 506
+ L++ P++ +LP +Q VF P RK+V +TNIAETS+TI G+ +V+D G K +
Sbjct: 325 VPLIVPYPLYAALPAVQQSLVFAPIKGFKRKVVFSTNIAETSVTISGVKFVVDSGLRKVK 384
Query: 507 -WFNPNTLTNSLVVVPISK 524
W + L +L+ VPIS+
Sbjct: 385 VWRHQLGLA-TLLTVPISQ 402
Score = 274 (101.5 bits), Expect = 5.2e-26, Sum P(3) = 5.2e-26
Identities = 54/117 (46%), Positives = 84/117 (71%)
Query: 587 QYLLEAGWCYDTKL---IGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTED 643
Q++LE YDTK I +T+PRR++ +LA RV++E LG VGY++RFD+ TT
Sbjct: 116 QFVLEK--LYDTKKHGSIAVTQPRRVAAINLATRVAQEHGCKLGEQVGYSVRFDNTTTTR 173
Query: 644 VTKIKYMTEGILMREMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKILKDKERD 700
T++KY+T+G+L+RE+M + LR+YSVI++DE HERT+ TD+++G LK +++ D
Sbjct: 174 -TRLKYLTDGMLLRELMMNSDLREYSVIVIDEAHERTVLTDLILGFLKSLIQGPRPD 229
Score = 171 (65.3 bits), Expect = 2.6e-19, Sum P(4) = 2.6e-19
Identities = 39/116 (33%), Positives = 69/116 (59%)
Query: 39 ECSRKFSRLYTEASFSQLNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNL 98
E K RLY E+ + +L + + PE+ R++++S VL LK G+ ++L +++ P + +
Sbjct: 415 ESEGKSFRLYCESDYVKLPKQSEPEIARSDVTSPVLMLKRYGVDDLLNWTWFENPGKEAI 474
Query: 99 RVALELLYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLLSSGSV--LDSAVEIL 152
+ L+ LY LGA+D G +TK G+ MA +PL P + VL+ + V L ++I+
Sbjct: 475 VMGLQELYELGALDTRGKITKR-GQQMALLPLQPHLSSVLIKASEVGCLSQVIDIV 529
Score = 87 (35.7 bits), Expect = 2.3e-31, Sum P(4) = 2.3e-31
Identities = 14/38 (36%), Positives = 28/38 (73%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILM 38
+T+G+L+ + + +YSVI++D+ HERT+ TD+++
Sbjct: 179 LTDGMLLRELMMNSDLREYSVIVIDEAHERTVLTDLIL 216
Score = 85 (35.0 bits), Expect = 2.3e-31, Sum P(4) = 2.3e-31
Identities = 18/40 (45%), Positives = 22/40 (55%)
Query: 807 VLKCLTNGFFSNAAYLHYSGVYRTVRGNEDLYIHPSSVLY 846
+LKC GF N A YRTV E + IHPSS+L+
Sbjct: 645 ILKCFLTGFIKNTAIGMPDRSYRTVSTGEPISIHPSSMLF 684
Score = 64 (27.6 bits), Expect = 2.3e-31, Sum P(4) = 2.3e-31
Identities = 26/111 (23%), Positives = 50/111 (45%)
Query: 697 KERDFECSDEIASILSLLQVQDIFIKPSSGALSL--KARVLRRNFEVEQGDLLTLLNIFK 754
K + C ++ I+S L V+++ + PS + R+ N GDL+ L +F
Sbjct: 515 KASEVGCLSQVIDIVSCLSVENLLLNPSPEERDEVNERRLSLCNAGKRYGDLIMLKELFD 574
Query: 755 --FYE--KQEN----KKQFCHKYFFNYKVLKRAAELKNQMILLLKK--SSI 795
FYE K ++ + +C + + K +++Q+ + K+ SSI
Sbjct: 575 IYFYELGKSQDASSERNDWCKGLCISIRGFKNVIRVRDQLRVYCKRLFSSI 625
>UNIPROTKB|O83538 [details] [associations]
symbol:TP_0526 "ATP-dependent helicase (HrpA)"
species:243276 "Treponema pallidum subsp. pallidum str. Nichols"
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:AE000520
GenomeReviews:AE000520_GR PIR:H71312 RefSeq:NP_218966.1
ProteinModelPortal:O83538 IntAct:O83538 GeneID:2610764
KEGG:tpa:TP0526 PATRIC:20531093 OMA:WEYRERF ProtClustDB:CLSK507866
Uniprot:O83538
Length = 668
Score = 254 (94.5 bits), Expect = 1.5e-27, Sum P(2) = 1.5e-27
Identities = 55/122 (45%), Positives = 84/122 (68%)
Query: 589 LLEAGWCYDTKLIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTKIK 648
L EAG+ + IG+T+PRRI+V S++ +++++ VGY +RF+D T + TKIK
Sbjct: 44 LHEAGY-NEGGAIGVTQPRRIAVLSVSEFIAKQVLHVQPGIVGYKMRFEDHTDVE-TKIK 101
Query: 649 YMTEGILMREMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKILKDKERDFECSDEIA 708
MT+GIL++EM DPLL KYS+IM+DE HER++ D ++GLLK++L+ + DF A
Sbjct: 102 VMTDGILLQEMKLDPLLSKYSIIMVDEAHERSLNIDFILGLLKRVLQQRH-DFRIVISSA 160
Query: 709 SI 710
+I
Sbjct: 161 TI 162
Score = 225 (84.3 bits), Expect = 7.1e-30, Sum P(3) = 7.1e-30
Identities = 64/188 (34%), Positives = 99/188 (52%)
Query: 347 KRTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYYS--NDPVVNYVQ- 403
+R +++ISSAT++ +++N ++ + YPV+V + + P + +
Sbjct: 149 QRHDFRIVISSATINTAMFSRYFN-----ECPVIKIDAVAYPVTVIFDPPDTPASTHTKE 203
Query: 404 ---GVVDTAIKIHE----SMPVGDILAFVIGLEQIEHIIGILKQYHNQREDLKLLILPMH 456
+++ + I E S G IL F+ G I++ I L ++R KL +LP++
Sbjct: 204 AEAALLEKIVCIVERVIASRDKGAILIFLPGERSIKNCITRLS---HERWFRKLFLLPLY 260
Query: 457 GSLPNNEQIKVFRPTPRAMRKIVIATNIAETSITIPGIVYVIDPGFVKARWFNPNTLTNS 516
G L EQ +VF P RK+VIATNIAETSITI + VID G VK +NP + T S
Sbjct: 261 GRLSKEEQEQVFNRAPFGKRKVVIATNIAETSITIDDVTTVIDSGLVKLNSYNPLSYTAS 320
Query: 517 LVVVPISK 524
L PIS+
Sbjct: 321 LDETPISQ 328
Score = 141 (54.7 bits), Expect = 1.3e-20, Sum P(3) = 1.3e-20
Identities = 32/96 (33%), Positives = 55/96 (57%)
Query: 46 RLYTEASFSQLNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRVALELL 105
RLY+ F Q T E+ RT+LS V+++ LGIH+ F F SPP + A + L
Sbjct: 348 RLYSRDDFEQREPYTLEEIYRTDLSEVVMRMAELGIHDFEHFDFISPPGTHGIIGAEDTL 407
Query: 106 YSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLLSS 141
LGA++ + +L++ +G+ M PL P +++++ +
Sbjct: 408 RLLGALEDDRSLSE-IGKMMCLFPLGPRQSRMIVEA 442
Score = 139 (54.0 bits), Expect = 7.1e-30, Sum P(3) = 7.1e-30
Identities = 28/116 (24%), Positives = 54/116 (46%)
Query: 731 KARVLRRNFEVEQGDLLTLLNIFKFYEKQENKKQFCHKYFFNYKVLKRAAELKNQMILLL 790
K + F GD ++ L I++ Y ++ NK FC ++ + +++ + +K Q+ L++
Sbjct: 475 KTKKAHGTFSDPMGDFVSFLRIYRAYAQENNKHSFCQHFYLDERIMAEISNIKEQLELIV 534
Query: 791 KKSSIPLVTSPRNTNAVLKCLTNGFFSNAAYLHYSGVYRTVRGNEDLYIHPSSVLY 846
PL+T L C+ G + YR++ E ++IHP S +Y
Sbjct: 535 SGMGFPLLTGG-TVEEYLICVGTGMIQFVCVQEHRDSYRSLTA-ECIHIHPGSCVY 588
Score = 98 (39.6 bits), Expect = 7.1e-30, Sum P(3) = 7.1e-30
Identities = 17/38 (44%), Positives = 28/38 (73%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILM 38
MT+GIL++ DP + KYS+IM+D+ HER++ D ++
Sbjct: 103 MTDGILLQEMKLDPLLSKYSIIMVDEAHERSLNIDFIL 140
Score = 50 (22.7 bits), Expect = 8.7e-06, Sum P(2) = 8.7e-06
Identities = 9/22 (40%), Positives = 16/22 (72%)
Query: 431 IEHIIGILKQYHNQREDLKLLI 452
I+ I+G+LK+ QR D +++I
Sbjct: 136 IDFILGLLKRVLQQRHDFRIVI 157
Score = 44 (20.5 bits), Expect = 1.0e-10, Sum P(3) = 1.0e-10
Identities = 13/57 (22%), Positives = 27/57 (47%)
Query: 425 VIGLEQIEHIIGILKQYHNQREDLKLLILPMHGSLPNNEQIKVFRPTPRAMRKIVIA 481
+IG E ++G L+ + E K++ L G + ++ R P ++ ++IA
Sbjct: 400 IIGAEDTLRLLGALEDDRSLSEIGKMMCLFPLGPRQSRMIVEALRRYPHSIDDVLIA 456
>UNIPROTKB|Q05BE5 [details] [associations]
symbol:DHX33 "DEAH (Asp-Glu-Ala-His) box polypeptide 33,
isoform CRA_c" species:9606 "Homo sapiens" [GO:0004386 "helicase
activity" evidence=IEA] InterPro:IPR007502 Pfam:PF04408
SMART:SM00847 EMBL:CH471108 GO:GO:0004386 InterPro:IPR011709
Pfam:PF07717 HOGENOM:HOG000175261 EMBL:AC004148 UniGene:Hs.250456
HGNC:HGNC:16718 ChiTaRS:DHX33 EMBL:BC050409 IPI:IPI00789223
SMR:Q05BE5 Ensembl:ENST00000433302 UCSC:uc010clf.3
HOVERGEN:HBG082280 Uniprot:Q05BE5
Length = 483
Score = 227 (85.0 bits), Expect = 2.9e-29, Sum P(2) = 2.9e-29
Identities = 50/153 (32%), Positives = 85/153 (55%)
Query: 701 FECSDEIASILSLLQVQDIFIKPSSGALSLKARVLRRNFEVEQGDLLTLLNIFKFYEKQE 760
F C++EI +I+SLL V + P S ++ +R+ F +GD +TLLNI++ ++
Sbjct: 292 FHCTEEILTIVSLLSVDSVLHNPPSRREEVQG--VRKKFISSEGDHMTLLNIYRTFKNLG 349
Query: 761 NKKQFCHKYFFNYKVLKRAAELKNQMILLLKKSSIPLVTSPRNTNAVLKCLTNGFFSNAA 820
K +C + F N K + AE++ Q+ + K S+P+ +S + +V +CL + F + A
Sbjct: 350 GNKDWCKENFVNSKNMTLVAEVRAQLRDICLKMSMPIASSRGDVESVRRCLAHSLFMSTA 409
Query: 821 YLHYSGVYRTVRGNEDLYIHPSSVLYTLQQPQC 853
L G Y T ++ + IHPSSVL+ + P C
Sbjct: 410 ELQPDGTYATTDTHQPVAIHPSSVLFHCK-PAC 441
Score = 178 (67.7 bits), Expect = 2.9e-29, Sum P(2) = 2.9e-29
Identities = 41/98 (41%), Positives = 59/98 (60%)
Query: 46 RLYTEASFSQLNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRVALELL 105
RLYTE F + ++ T PE+QR L+S +LQL A+ + N+L F F S P +++ A+ L
Sbjct: 192 RLYTEDEFEKFDKMTVPEIQRCNLASVMLQLLAMKVPNVLTFDFMSKPSPDHIQAAIAQL 251
Query: 106 YSLGAMD-VNGNLT-KPVGETMAEMPLHPIHAKVLLSS 141
LGA++ + LT P+G MA PL P AK +L S
Sbjct: 252 DLLGALEHKDDQLTLTPMGRKMAAFPLEPKFAKTILMS 289
Score = 37 (18.1 bits), Expect = 1.5e-14, Sum P(2) = 1.5e-14
Identities = 6/15 (40%), Positives = 10/15 (66%)
Query: 563 PTIPNDPKDVKCDVM 577
P++P PKD +V+
Sbjct: 151 PSLPRGPKDSGLEVL 165
>RGD|1307239 [details] [associations]
symbol:Dhx33 "DEAH (Asp-Glu-Ala-His) box polypeptide 33"
species:10116 "Rattus norvegicus" [GO:0000182 "rDNA binding"
evidence=ISO] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005654 "nucleoplasm" evidence=ISO] [GO:0005730 "nucleolus"
evidence=ISO] [GO:0033613 "activating transcription factor binding"
evidence=ISO] [GO:0045943 "positive regulation of transcription
from RNA polymerase I promoter" evidence=ISO] InterPro:IPR007502
Pfam:PF04408 SMART:SM00847 RGD:1307239 GO:GO:0004386
InterPro:IPR011709 Pfam:PF07717 IPI:IPI00952339
Ensembl:ENSRNOT00000068255 UCSC:RGD:1307239 Uniprot:D3ZWE8
Length = 475
Score = 224 (83.9 bits), Expect = 4.0e-28, Sum P(2) = 4.0e-28
Identities = 49/153 (32%), Positives = 87/153 (56%)
Query: 701 FECSDEIASILSLLQVQDIFIKPSSGALSLKARVLRRNFEVEQGDLLTLLNIFKFYEKQE 760
F C++EI +I+SLL V + P + +++ +R+ F +GD +TLLNI++ ++
Sbjct: 284 FHCTEEILTIVSLLSVDSVLYNPPARRDEVQS--VRKKFISSEGDHITLLNIYRTFKNIG 341
Query: 761 NKKQFCHKYFFNYKVLKRAAELKNQMILLLKKSSIPLVTSPRNTNAVLKCLTNGFFSNAA 820
K +C + F N K + AE++ Q+ + K S+P+++S + +V +CL + F + A
Sbjct: 342 GNKDWCKENFVNSKNMLLVAEVRAQLRDICLKMSMPIMSSRGDMESVRRCLAHSLFMSTA 401
Query: 821 YLHYSGVYRTVRGNEDLYIHPSSVLYTLQQPQC 853
L G Y T ++ + IHPSSVL+ + P C
Sbjct: 402 ELQPDGTYATTDTHQPVAIHPSSVLFHCK-PAC 433
Score = 170 (64.9 bits), Expect = 4.0e-28, Sum P(2) = 4.0e-28
Identities = 42/100 (42%), Positives = 58/100 (58%)
Query: 46 RLYTEASFSQLNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRVALELL 105
RLYTE F + + PE+QR L+S +LQL A+ + N+L F F S P ++ A+ L
Sbjct: 184 RLYTEDEFDKFEKMAAPEIQRCNLASVMLQLLAMKVPNVLTFDFMSRPSPDHIEAAIAQL 243
Query: 106 YSLGAMDVNGN---LTKPVGETMAEMPLHPIHAK-VLLSS 141
LGA++ + LT P+G MA PL P AK +LLSS
Sbjct: 244 DLLGALEHKDDQLALT-PIGRKMAAFPLEPKFAKTILLSS 282
>UNIPROTKB|J3KSW6 [details] [associations]
symbol:DHX40 "Probable ATP-dependent RNA helicase DHX40"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR002464
InterPro:IPR011545 Pfam:PF00270 PROSITE:PS00690 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 HGNC:HGNC:18018 ChiTaRS:DHX40 EMBL:AC091271
EMBL:AC004167 Ensembl:ENST00000580030 Uniprot:J3KSW6
Length = 268
Score = 315 (115.9 bits), Expect = 3.8e-27, P = 3.8e-27
Identities = 59/111 (53%), Positives = 87/111 (78%)
Query: 587 QYLLEAGWCYDTKLIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTK 646
+YL EAG+ +IG+T+PR+++ S+A RV+EE++ TLG VGY +RFDDC++++ T
Sbjct: 68 KYLYEAGFSQHG-MIGVTQPRKVAAISVAQRVAEEMKCTLGSKVGYQVRFDDCSSKE-TA 125
Query: 647 IKYMTEGILMREMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKILKDK 697
IKYMT+G L++ ++ DP L K+SVI+LDE HERT+ TDIL GLLKK+ ++K
Sbjct: 126 IKYMTDGCLLKHILGDPNLTKFSVIILDEAHERTLTTDILFGLLKKLFQEK 176
Score = 119 (46.9 bits), Expect = 0.00094, Sum P(2) = 0.00094
Identities = 31/109 (28%), Positives = 54/109 (49%)
Query: 330 DVIGEDMKAFAEQLKPLKRTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPV 389
D++ +K ++ P ++ LK+++ SAT++ ++ F+ N I + G LYPV
Sbjct: 163 DILFGLLKKLFQEKSPNRKEHLKVVVMSATMELAKLSAFFG-----NCPIFDIPGRLYPV 217
Query: 390 SVYYSN--DPV----VNYVQGVVDTAIKIHESMPVGDILAFVIGLEQIE 432
+ N P Y+Q +V + IH + GDIL F+ G +IE
Sbjct: 218 REKFCNLIGPRDRENTAYIQAIVKVTMDIHLNEMAGDILVFLTGQFEIE 266
Score = 38 (18.4 bits), Expect = 0.00094, Sum P(2) = 0.00094
Identities = 11/54 (20%), Positives = 23/54 (42%)
Query: 55 QLNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRVALELLYSL 108
+ ++C+ E ++ L LG N+ +FS A + ++L+ L
Sbjct: 115 RFDDCSSKETAIKYMTDGCLLKHILGDPNLTKFSVIILDEAHERTLTTDILFGL 168
>WB|WBGene00020263 [details] [associations]
symbol:T05E8.3 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0040035 "hermaphrodite genitalia development"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0007413
"axonal fasciculation" evidence=IMP] [GO:0040011 "locomotion"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0006898 GO:GO:0040010
GO:GO:0040011 GO:GO:0003676 GO:GO:0040035 GO:GO:0007413
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
GeneTree:ENSGT00700000104241 EMBL:FO080463 PIR:T29623
RefSeq:NP_491604.3 ProteinModelPortal:O01598 SMR:O01598
STRING:O01598 PaxDb:O01598 EnsemblMetazoa:T05E8.3 GeneID:172199
KEGG:cel:CELE_T05E8.3 UCSC:T05E8.3 CTD:172199 WormBase:T05E8.3
InParanoid:O01598 OMA:KEGCIME NextBio:874451 Uniprot:O01598
Length = 856
Score = 270 (100.1 bits), Expect = 5.9e-27, Sum P(3) = 5.9e-27
Identities = 77/226 (34%), Positives = 116/226 (51%)
Query: 351 LKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYYSNDPVVN-------YVQ 403
L+LII SAT+ AE+ ++N NA ++ V G +P+ V++ N P +N YV
Sbjct: 311 LRLIIMSATLQAEKFQSYFN-----NAKVVLVAGRTFPIEVFHVN-PKINKSFSSTDYVY 364
Query: 404 GVVDTAIKIHESMPVG-DILAFVIGLEQIEHIIGILKQYHNQ---REDLKLLILPMHGSL 459
V +H + P G DIL F+ G E+IE + L + + D+ L+ +P++ +L
Sbjct: 365 NAVICVKYVHLTEPKGRDILVFLTGSEEIEAVASQLAELNGSLPASADV-LMPVPLYAAL 423
Query: 460 PNNEQIKVFRPTPRAMRKIVIATNIAETSITIPGIVYVIDPGFVKARWFNPNTLTNSLVV 519
+Q + FR TP+ RK++I+TNIAETS+TIPGI VID G VK + F + L V
Sbjct: 424 RPEKQKEAFRKTPQGARKVIISTNIAETSVTIPGIRVVIDSGKVKTKRFEAFNRIDVLKV 483
Query: 520 VPISKXXXXXXXXXXXXXXXXHVYRKNFMYNRLFIHFCVSRNIPTI 565
+SK YR +Y+R H + N+P I
Sbjct: 484 HNVSKAQAKQRAGRAGRDAPGKCYR---LYSREDFHKFEAENMPEI 526
Score = 246 (91.7 bits), Expect = 1.4e-19, Sum P(2) = 1.4e-19
Identities = 45/100 (45%), Positives = 75/100 (75%)
Query: 601 IGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTKIKYMTEGILMREMM 660
I +T+PRR++ SLA+RV+ E+ T +G VGY +RF++ T TKI+YMT+GI++R+ +
Sbjct: 209 IAVTQPRRVAAISLASRVATEMGTNIGGIVGYHVRFENATCHK-TKIEYMTDGIVLRKAL 267
Query: 661 TDPLLRKYSVIMLDEVHERTIFTDILMGLLKKILKDKERD 700
PLL KYS +++DE HER++ +D+LM +L++ +D+ R+
Sbjct: 268 VSPLLDKYSCVIIDEAHERSLHSDVLMCILRQC-QDQRRE 306
Score = 136 (52.9 bits), Expect = 2.1e-12, Sum P(3) = 2.1e-12
Identities = 39/118 (33%), Positives = 60/118 (50%)
Query: 43 KFSRLYTEASFSQLNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRVAL 102
K RLY+ F + PE+ R LS+ L+L LG+ N R PP N+ AL
Sbjct: 505 KCYRLYSREDFHKFEAENMPEILRCNLSATFLELMKLGMKNPHRLKLIDPPETDNINAAL 564
Query: 103 ELLYSLGAM-DVNGNLTK----PVGETMAEMPLHPIHAKVLLSS---GSVLDSAVEIL 152
L SLGA+ VN + +K +G+ PL P HA++L + G +++ A++I+
Sbjct: 565 LELTSLGAIRPVNSDRSKFALTEMGDAFCMYPLPPDHARILFQAQKEGCIME-AIKIV 621
Score = 91 (37.1 bits), Expect = 5.9e-27, Sum P(3) = 5.9e-27
Identities = 15/38 (39%), Positives = 28/38 (73%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILM 38
MT+GI++ P ++KYS +++D+ HER++ +D+LM
Sbjct: 257 MTDGIVLRKALVSPLLDKYSCVIIDEAHERSLHSDVLM 294
Score = 75 (31.5 bits), Expect = 5.9e-27, Sum P(3) = 5.9e-27
Identities = 26/96 (27%), Positives = 44/96 (45%)
Query: 754 KFYEKQENK--KQFCHKYFFNYKVLKRAAELKNQMILLLKKSSIPLVTSPRNTNAVLKCL 811
K E++ N+ ++FC+ N + LK A+ ++ Q+ + + + T + + K L
Sbjct: 688 KSLEREYNQTIRKFCNDNMINEQHLKTASMIEEQLKQIAIEQKVTFSTCGADFMKMRKAL 747
Query: 812 TNGFFSNAA-YLHYSGVYRT-VRGNEDLYIHPSSVL 845
G F N+ Y YR + L IHPSS L
Sbjct: 748 ALGMFLNSCEYDRQEDRYRLMINPAITLKIHPSSCL 783
Score = 68 (29.0 bits), Expect = 3.1e-26, Sum P(3) = 3.1e-26
Identities = 22/91 (24%), Positives = 41/91 (45%)
Query: 692 KILKDKERDFECSDEIASILSLLQVQDIFIKPSSGALSLKARVLRRNFEVEQGDLLTLLN 751
+IL +++ C E I++ +Q +F +RR FE +GD +TLL
Sbjct: 603 RILFQAQKE-GCIMEAIKIVAAMQTDALFSGAGDSKSDADVDRIRRRFETREGDHITLLK 661
Query: 752 IF----KFYEKQENKKQFCHKYFFNYKVLKR 778
+ +F+++ K + +Y K L+R
Sbjct: 662 LVLVTNQFFDQLNKKTESDARYGKANKSLER 692
>CGD|CAL0002969 [details] [associations]
symbol:orf19.107 species:5476 "Candida albicans" [GO:0005730
"nucleolus" evidence=IEA] [GO:0003724 "RNA helicase activity"
evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
CGD:CAL0002969 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 KO:K14781 EMBL:AACQ01000106 RefSeq:XP_714316.1
GeneID:3644014 KEGG:cal:CaO19.107 Uniprot:Q59XP9
Length = 831
Score = 313 (115.2 bits), Expect = 3.1e-26, Sum P(2) = 3.1e-26
Identities = 90/294 (30%), Positives = 149/294 (50%)
Query: 257 VACSCTVVEFLTEMGCRMDFEYISRGYMFRKGRMKILVSKIFKMSQGKPSDSGVEPISQS 316
VA + E GC++ + GY R M +K+ ++ G E + S
Sbjct: 235 VAAASLAARVSEEYGCKLGQDV---GYQVRFTNMTNRQTKLKYLTDGMLLR---EIMLDS 288
Query: 317 YLVELS--ILAPGGQDVIGEDM-KAFAEQLKPL-KRTQLKLIISSATVDAEEICQFYNIS 372
L + S IL + I D+ F +Q+ KR LK+++ SAT++AE F+
Sbjct: 289 NLTKYSTIILDEAHERTILTDLIMGFLKQIITSGKRKDLKIVVMSATLNAELFSNFFG-- 346
Query: 373 ASSNATILSVKGHLYPVSVYYSNDPVVNYVQGVVDTAIKIHESMPVGDILAFVIGLEQIE 432
NA IL ++G +YPVS +Y + + V ++ + I+I+ + P GD+L F+ G E+I+
Sbjct: 347 ---NAPILYIEGKMYPVSQFYLDAESEDIVDTMIRSIIQINLNEPEGDVLCFLPGQEEID 403
Query: 433 HIIGILKQYHNQ--REDLKLLILPMHGSLPNNEQIKVFRPTPRAMRKIVIATNIAETSIT 490
+ + L+Q Q RE ++ LP++ +L +Q K+F P+ RK+++ATNIAETSIT
Sbjct: 404 NCVKSLEQLAPQLPREAPLIVPLPLYAALSPGQQSKIFEKLPKGRRKVILATNIAETSIT 463
Query: 491 IPGIVYVIDPGFVKARWFNPNTLTNSLVVVPISKXXXXXXXXXXXXXXXXHVYR 544
+ G+ YVID G K + + N ++L+ PIS+ V+R
Sbjct: 464 VSGVKYVIDSGLRKIKVWKHNLGLSTLLTTPISQASARQRAGRAGRESEGKVFR 517
Score = 285 (105.4 bits), Expect = 3.7e-23, Sum P(2) = 3.7e-23
Identities = 56/105 (53%), Positives = 76/105 (72%)
Query: 599 KLIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTKIKYMTEGILMRE 658
K+IG+T+PRR++ SLA RVSEE LG VGY +RF + T TK+KY+T+G+L+RE
Sbjct: 225 KMIGVTQPRRVAAASLAARVSEEYGCKLGQDVGYQVRFTNMTNRQ-TKLKYLTDGMLLRE 283
Query: 659 MMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKILKD-KERDFE 702
+M D L KYS I+LDE HERTI TD++MG LK+I+ K +D +
Sbjct: 284 IMLDSNLTKYSTIILDEAHERTILTDLIMGFLKQIITSGKRKDLK 328
Score = 140 (54.3 bits), Expect = 7.0e-13, Sum P(3) = 7.0e-13
Identities = 37/115 (32%), Positives = 65/115 (56%)
Query: 39 ECSRKFSRLYTEASFSQLNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNL 98
E K RLY E+++ L + E++R ++ VL LK LG+ ++L +S+ P +
Sbjct: 510 ESEGKVFRLYPESTYMALPKQQESEIKRNDIILPVLTLKKLGVDDLLNWSWLEYPGQDAI 569
Query: 99 RVALELLYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLLSSGS--VLDSAVEI 151
AL LY+LGA++ +G +T +G M+ +PL P + VL+++ VL ++I
Sbjct: 570 LSALNTLYTLGALNDSGKVTT-LGYKMSILPLPPQLSVVLITAAEFGVLSPVIDI 623
Score = 98 (39.6 bits), Expect = 7.0e-13, Sum P(3) = 7.0e-13
Identities = 18/38 (47%), Positives = 28/38 (73%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILM 38
+T+G+L+ D ++ KYS I+LD+ HERTI TD++M
Sbjct: 275 LTDGMLLREIMLDSNLTKYSTIILDEAHERTILTDLIM 312
Score = 68 (29.0 bits), Expect = 3.1e-26, Sum P(2) = 3.1e-26
Identities = 14/43 (32%), Positives = 25/43 (58%)
Query: 744 GDLLTLLNIFKFYEKQENKKQFCHKYFFNYKVLKRAAELKNQM 786
GDL+ L F+ Y+ Q K++C + F++K K ++K Q+
Sbjct: 659 GDLIALYEYFQAYQAQG--KEWCKELAFSFKGFKNVEKIKYQL 699
Score = 59 (25.8 bits), Expect = 2.7e-25, Sum P(2) = 2.7e-25
Identities = 23/99 (23%), Positives = 42/99 (42%)
Query: 753 FKFYEKQENKKQFCHKYFFNYKVLKRAAEL----KNQMILLLKKSSIPLVTSPR-NTNAV 807
FK ++ E K +Y +K+ L KN+ + L+ T + + ++
Sbjct: 686 FKGFKNVEKIKYQLQEYMMT--TIKQDDSLTNAEKNKQLAKLRAQLDNEETDKQLDVPSI 743
Query: 808 LKCLTNGFFSNAAYLHYSGVYRTVRGNEDLYIHPSSVLY 846
LK G+ +N A +RT + + +HPSS L+
Sbjct: 744 LKSFLKGYITNTAVGMPDRSFRTFNTGQLISVHPSSTLF 782
Score = 43 (20.2 bits), Expect = 1.5e-20, Sum P(2) = 1.5e-20
Identities = 14/42 (33%), Positives = 20/42 (47%)
Query: 785 QMILLLKKSSIPLVTSPRNTNAVLKCLTNGFFSNAAYLHYSG 826
Q+I K+ + +V NA L +N FF NA L+ G
Sbjct: 317 QIITSGKRKDLKIVVMSATLNAEL--FSN-FFGNAPILYIEG 355
>UNIPROTKB|B4DVG8 [details] [associations]
symbol:DHX38 "Uncharacterized protein" species:9606 "Homo
sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 GO:GO:0004386
InterPro:IPR011709 Pfam:PF07717 HOGENOM:HOG000175261 EMBL:AC009087
UniGene:Hs.151218 HGNC:HGNC:17211 ChiTaRS:DHX38 EMBL:AK301074
IPI:IPI00909589 SMR:B4DVG8 STRING:B4DVG8 Ensembl:ENST00000536867
UCSC:uc010vmp.2 HOVERGEN:HBG093770 Uniprot:B4DVG8
Length = 539
Score = 202 (76.2 bits), Expect = 5.0e-26, Sum P(2) = 5.0e-26
Identities = 47/109 (43%), Positives = 71/109 (65%)
Query: 46 RLYTEASF-SQLNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRVALEL 104
RLYT++++ ++L T PE+QRT L++ VL LK+LG+ ++L+F F PPP N+ ++
Sbjct: 179 RLYTQSAYKNELLTTTVPEIQRTNLANVVLLLKSLGVQDLLQFHFMDPPPEDNMLNSMYQ 238
Query: 105 LYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLLSSGSVLDSAVEILL 153
L+ LGA+D G LT G M E PL P +K+L+ S + S+ EILL
Sbjct: 239 LWILGALDNTGGLTS-TGRLMVEFPLDPALSKMLIVSCDMGCSS-EILL 285
Score = 176 (67.0 bits), Expect = 5.0e-26, Sum P(2) = 5.0e-26
Identities = 40/147 (27%), Positives = 75/147 (51%)
Query: 700 DFECSDEIASILSLLQVQDIFIKPSSGALSLKARVLRRNFEVEQGDLLTLLNIFKFYEKQ 759
D CS EI I+S+L V IF +P ++ +R F V + D LT LN++ ++
Sbjct: 276 DMGCSSEILLIVSMLSVPAIFYRPKGR--EEESDQIREKFAVPESDHLTYLNVYLQWKNN 333
Query: 760 ENKKQFCHKYFFNYKVLKRAAELKNQMILLLKKSSIPLVTSPRNTNAVLKCLTNGFFSNA 819
+C+ +F + K +++ E++ Q+ ++ + + L + + + V KC+ +F A
Sbjct: 334 NYSTIWCNDHFIHAKAMRKVREVRAQLKDIMVQQRMSLASCGTDWDIVRKCICAAYFHQA 393
Query: 820 AYLHYSGVYRTVRGNEDLYIHPSSVLY 846
A L G Y +R ++HP+S L+
Sbjct: 394 AKLKGIGEYVNIRTGMPCHLHPTSSLF 420
Score = 160 (61.4 bits), Expect = 1.8e-21, Sum P(2) = 1.8e-21
Identities = 29/62 (46%), Positives = 45/62 (72%)
Query: 463 EQIKVFRPTPRAMRKIVIATNIAETSITIPGIVYVIDPGFVKARWFNPNTLTNSLVVVPI 522
+Q K+F+ P +RK ++ATNIAETS+T+ GI++VID G+ K + FNP ++L + PI
Sbjct: 98 DQAKIFQKAPDGVRKCIVATNIAETSLTVDGIMFVIDSGYCKLKVFNPRIGMDALQIYPI 157
Query: 523 SK 524
S+
Sbjct: 158 SQ 159
Score = 42 (19.8 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 18/56 (32%), Positives = 25/56 (44%)
Query: 653 GILMREMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKIL-KDKERDFECSDEI 707
G LM E DP L K ++ D I + M + I + K R+ E SD+I
Sbjct: 255 GRLMVEFPLDPALSKMLIVSCDMGCSSEILLIVSMLSVPAIFYRPKGREEE-SDQI 309
>UNIPROTKB|J3KTK0 [details] [associations]
symbol:DHX40 "Probable ATP-dependent RNA helicase DHX40"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR002464
InterPro:IPR011545 Pfam:PF00270 PROSITE:PS00690 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 HGNC:HGNC:18018 ChiTaRS:DHX40 EMBL:AC091271
EMBL:AC004167 Ensembl:ENST00000584385 Uniprot:J3KTK0
Length = 173
Score = 302 (111.4 bits), Expect = 9.5e-26, P = 9.5e-26
Identities = 54/98 (55%), Positives = 80/98 (81%)
Query: 600 LIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTKIKYMTEGILMREM 659
+IG+T+PR+++ S+A RV+EE++ TLG VGY +RFDDC++++ T IKYMT+G L++ +
Sbjct: 44 MIGVTQPRKVAAISVAQRVAEEMKCTLGSKVGYQVRFDDCSSKE-TAIKYMTDGCLLKHI 102
Query: 660 MTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKILKDK 697
+ DP L K+SVI+LDE HERT+ TDIL GLLKK+ ++K
Sbjct: 103 LGDPNLTKFSVIILDEAHERTLTTDILFGLLKKLFQEK 140
>DICTYBASE|DDB_G0268212 [details] [associations]
symbol:DDB_G0268212 "putative DEAD/DEAH box helicase"
species:44689 "Dictyostelium discoideum" [GO:0004386 "helicase
activity" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR007502 Pfam:PF04408
SMART:SM00847 dictyBase:DDB_G0268212 GO:GO:0005524
EMBL:AAFI02000003 GO:GO:0004386 InterPro:IPR014001 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 RefSeq:XP_647649.1
ProteinModelPortal:Q55F84 IntAct:Q55F84 EnsemblProtists:DDB0233906
GeneID:8616466 KEGG:ddi:DDB_G0268212 Uniprot:Q55F84
Length = 455
Score = 227 (85.0 bits), Expect = 9.6e-26, Sum P(2) = 9.6e-26
Identities = 43/95 (45%), Positives = 70/95 (73%)
Query: 599 KLIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTKIKYMTEGILMRE 658
K I TE +R + LA VS+++ +G TVGY IRF++ + + +KIK++T+G+L+RE
Sbjct: 42 KTIVCTEAKRSNAIKLAELVSKQMNEQVGKTVGYGIRFEEKVSNE-SKIKFITDGLLVRE 100
Query: 659 MMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKI 693
M+ DPLL YS++++D+V ER++ TD+L+ LLKK+
Sbjct: 101 MIVDPLLNNYSILIIDQVDERSLSTDLLLALLKKL 135
Score = 143 (55.4 bits), Expect = 9.6e-26, Sum P(2) = 9.6e-26
Identities = 44/166 (26%), Positives = 84/166 (50%)
Query: 689 LLKKILKDKERDFECSDEIASILSLLQVQ---DIFIKPSSGALSLKARVLRRNFEVEQGD 745
+ K++ + E+ CS++I +I+S+L + D+FI + LS A + Q D
Sbjct: 264 IYSKVIIESEK-LGCSEQILNIISMLLINNKNDLFI---NSKLSSSALI------DSQSD 313
Query: 746 LLTLLNIFKFYEKQENKKQFCHKYFFNYKVLKRAAELKNQMILLLKKSSIPLVT------ 799
LTLLN++ + + +C+ N++ ++ ++KNQ++ L K S+ L++
Sbjct: 314 HLTLLNVYNSFISNKCSPIWCNDNQINFQTIQTVQQIKNQLLNCLTKVSVKLLSCNDDGS 373
Query: 800 -SPRNTNAVLKCLTNGFFSNAAYLHYSGVYRT-VRGNEDLYIHPSS 843
S ++T+ + K +GFF+N A Y T V + +HP+S
Sbjct: 374 SSKQSTDHIKKSFLSGFFNNVAKSTTDNSYETIVEPIRKVLLHPTS 419
Score = 122 (48.0 bits), Expect = 8.2e-19, Sum P(3) = 8.2e-19
Identities = 31/88 (35%), Positives = 52/88 (59%)
Query: 60 TPPEMQRTE-LSSAVLQLKALGIHNILRFSFPSPPPAQNLRVALELLYSLGAMDVN---G 115
T PE+++ + L+ +LQLK+ I N+ F + P + + +L L+ LGA+ N G
Sbjct: 186 TTPEIEKCKNLTPFILQLKSFNIDNLKSFEMITSPSLELINQSLNELFRLGAISSNQDNG 245
Query: 116 N--LTKPVGETMAEMPLHPIHAKVLLSS 141
+ LT +G TM +PL PI++KV++ S
Sbjct: 246 SSKLTS-IGNTMVGLPLEPIYSKVIIES 272
Score = 88 (36.0 bits), Expect = 8.2e-19, Sum P(3) = 8.2e-19
Identities = 15/43 (34%), Positives = 30/43 (69%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILMECSRK 43
+T+G+L+ DP + YS++++D+V ER++ TD+L+ +K
Sbjct: 92 ITDGLLVREMIVDPLLNNYSILIIDQVDERSLSTDLLLALLKK 134
Score = 48 (22.0 bits), Expect = 2.9e-11, Sum P(3) = 2.9e-11
Identities = 14/41 (34%), Positives = 23/41 (56%)
Query: 342 QLKPLKRTQLKLIISSAT-VDAEEICQFYNISASSNATILS 381
++ KR LK++I ++T +A EI F+ S N + LS
Sbjct: 136 EISTTKRPDLKIVILTSTNSNANEIKNFFG---SDNVSTLS 173
Score = 44 (20.5 bits), Expect = 1.4e-08, Sum P(3) = 1.4e-08
Identities = 16/45 (35%), Positives = 23/45 (51%)
Query: 350 QLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYYS 394
Q+ IIS ++ + F N SS+A I S HL ++VY S
Sbjct: 280 QILNIISMLLINNKNDL-FINSKLSSSALIDSQSDHLTLLNVYNS 323
Score = 40 (19.1 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 13/38 (34%), Positives = 21/38 (55%)
Query: 434 IIGILKQYH---NQREDLKLLILPMHGSLPNNEQIKVF 468
++ +LK+ +R DLK++IL S N +IK F
Sbjct: 128 LLALLKKLEISTTKRPDLKIVILTSTNS--NANEIKNF 163
>UNIPROTKB|Q9KS77 [details] [associations]
symbol:VC1382 "ATP-dependent helicase HrpA" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0004386
"helicase activity" evidence=ISS] [GO:0008152 "metabolic process"
evidence=ISS] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR010222 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GenomeReviews:AE003852_GR GO:GO:0003676 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K03578 OMA:TYQFEPG
ProtClustDB:PRK11131 InterPro:IPR024590 Pfam:PF11898
TIGRFAMs:TIGR01967 EMBL:AE004217 PIR:F82207 RefSeq:NP_231026.2
ProteinModelPortal:Q9KS77 DNASU:2614836 GeneID:2614836
KEGG:vch:VC1382 PATRIC:20081832 Uniprot:Q9KS77
Length = 1309
Score = 256 (95.2 bits), Expect = 9.6e-26, Sum P(3) = 9.6e-26
Identities = 70/193 (36%), Positives = 108/193 (55%)
Query: 339 FAEQLKPLKRTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYY----- 393
+ +QL P +R LK+II+SAT+D E + + SNA I+ V G YPV V Y
Sbjct: 222 YLKQLLP-RRPDLKVIITSATIDPERFSKHF-----SNAPIIEVSGRTYPVEVRYRPLAG 275
Query: 394 --SNDPVVNYVQGVVDTAIKIHESMPVGDILAFVIGLEQIEHIIGILKQYHNQREDLKLL 451
++ + ++G+ ++ + +GDIL F+ G +I L + N R D +
Sbjct: 276 DDDSESDRDQLEGIFQAVDELCDE-GLGDILIFMNGEREIRDTADALSK-RNLR-DTE-- 330
Query: 452 ILPMHGSLPNNEQIKVFRPTPRAMRKIVIATNIAETSITIPGIVYVIDPGFVKARWFNPN 511
I+P++ L EQ K+F+P A R+IV+ATN+AETS+T+PGI YVIDPG + ++
Sbjct: 331 IVPLYARLSAGEQNKIFQP--HAGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYR 388
Query: 512 TLTNSLVVVPISK 524
T L + PIS+
Sbjct: 389 TKVQRLPIEPISQ 401
Score = 240 (89.5 bits), Expect = 5.1e-21, Sum P(2) = 5.1e-21
Identities = 46/95 (48%), Positives = 67/95 (70%)
Query: 600 LIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTKIKYMTEGILMREM 659
LIG T+PRR++ S+ANR++EE+ T LG VGY +RF D D T+IK MT+GIL+ E+
Sbjct: 134 LIGHTQPRRLAARSVANRIAEEMETELGGFVGYKVRFTD-QISDQTQIKLMTDGILLAEI 192
Query: 660 MTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKIL 694
D L +Y I++DE HER++ D ++G LK++L
Sbjct: 193 QNDRFLNQYDTIIIDEAHERSLNIDFILGYLKQLL 227
Score = 153 (58.9 bits), Expect = 1.1e-14, Sum P(3) = 1.1e-14
Identities = 40/113 (35%), Positives = 64/113 (56%)
Query: 46 RLYTEASFSQLNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRVALELL 105
RLY+E F E T PE+ RT L+S +LQ+ ALG+ +I F F P +N++ + LL
Sbjct: 421 RLYSEEDFLSRPEFTDPEILRTNLASVILQMTALGLGDIEAFPFVEAPDKRNIQDGVRLL 480
Query: 106 YSLGAM-----DVNGNLTKPVGETMAEMPLHPIHAKVLLSSGSVLDSAVEILL 153
LGA+ D LT+ G+ +A +P+ P A+++L + S L E+++
Sbjct: 481 EELGAINDQIKDPKKRLTES-GKQLARLPIDPRLARMVLEA-SKLGCLKEVMI 531
Score = 100 (40.3 bits), Expect = 9.6e-26, Sum P(3) = 9.6e-26
Identities = 40/157 (25%), Positives = 66/157 (42%)
Query: 703 CSDEIASILSLLQVQDIFIKPSSGALSLKARVLRRNFEVEQGDLLTLLNIFKFYEKQEN- 761
C E+ I S L +QD +PS S + R F E D LTL+N++ + +Q+
Sbjct: 525 CLKEVMIIASALSIQDPRERPSDKQQSADDK--HRRFNHEDSDFLTLVNLWHYIGQQQKA 582
Query: 762 --KKQF---CHKYFFNYKVLKRAAELKNQMILLLKKSSIPLVTSPRNTNAVLKCLTNGFF 816
QF C + NY ++ ++ Q+ ++ L P + +AV + G
Sbjct: 583 LTSNQFRRQCKLDYLNYLRVREWQDVYTQLHQSTREMGFKLNDEPGSYHAVHSAILVGLL 642
Query: 817 SNAAYLHYS-GVYRTVRGNEDLYIHPSSVLYTLQQPQ 852
S+ Y R N I P+S L+ +QP+
Sbjct: 643 SHIGMKDQEKNEYHGAR-NARFNIFPASGLFK-KQPK 677
Score = 77 (32.2 bits), Expect = 9.6e-26, Sum P(3) = 9.6e-26
Identities = 13/38 (34%), Positives = 25/38 (65%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILM 38
MT+GIL+ +D + +Y I++D+ HER++ D ++
Sbjct: 183 MTDGILLAEIQNDRFLNQYDTIIIDEAHERSLNIDFIL 220
Score = 38 (18.4 bits), Expect = 2.1e-08, Sum P(3) = 2.1e-08
Identities = 14/61 (22%), Positives = 24/61 (39%)
Query: 310 VEPISQSYLVELSILAPGGQDVIGEDMKAFAEQLKPLKRTQLKLIISSATVDAEEICQFY 369
++P+ + S L G + K L ++ + K VD EE+ QFY
Sbjct: 751 IDPVLSREIFIRSALVEGDWETKHAFFKQNRALLAEVEELEHKSRRRDILVDDEELFQFY 810
Query: 370 N 370
+
Sbjct: 811 D 811
Score = 38 (18.4 bits), Expect = 2.1e-08, Sum P(3) = 2.1e-08
Identities = 23/86 (26%), Positives = 39/86 (45%)
Query: 423 AFVIGLEQIEHIIGILKQ----YHNQREDLKLLILPMHGSLPNNEQIKVFRPTPRAMRKI 478
A ++GL + HI G+ Q YH R + + I P G +F+ P K
Sbjct: 636 AILVGL--LSHI-GMKDQEKNEYHGAR-NARFNIFPASG---------LFKKQP----KW 678
Query: 479 VIATNIAETSITIPGIVYVIDPGFVK 504
V++ + ETS +V I+P +++
Sbjct: 679 VMSAELVETSKLWARVVAKIEPDWIE 704
>TIGR_CMR|VC_1382 [details] [associations]
symbol:VC_1382 "ATP-dependent helicase HrpA" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0004386 "helicase activity"
evidence=ISS] [GO:0008152 "metabolic process" evidence=ISS]
InterPro:IPR001650 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR010222 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GenomeReviews:AE003852_GR GO:GO:0003676
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K03578 OMA:TYQFEPG
ProtClustDB:PRK11131 InterPro:IPR024590 Pfam:PF11898
TIGRFAMs:TIGR01967 EMBL:AE004217 PIR:F82207 RefSeq:NP_231026.2
ProteinModelPortal:Q9KS77 DNASU:2614836 GeneID:2614836
KEGG:vch:VC1382 PATRIC:20081832 Uniprot:Q9KS77
Length = 1309
Score = 256 (95.2 bits), Expect = 9.6e-26, Sum P(3) = 9.6e-26
Identities = 70/193 (36%), Positives = 108/193 (55%)
Query: 339 FAEQLKPLKRTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYY----- 393
+ +QL P +R LK+II+SAT+D E + + SNA I+ V G YPV V Y
Sbjct: 222 YLKQLLP-RRPDLKVIITSATIDPERFSKHF-----SNAPIIEVSGRTYPVEVRYRPLAG 275
Query: 394 --SNDPVVNYVQGVVDTAIKIHESMPVGDILAFVIGLEQIEHIIGILKQYHNQREDLKLL 451
++ + ++G+ ++ + +GDIL F+ G +I L + N R D +
Sbjct: 276 DDDSESDRDQLEGIFQAVDELCDE-GLGDILIFMNGEREIRDTADALSK-RNLR-DTE-- 330
Query: 452 ILPMHGSLPNNEQIKVFRPTPRAMRKIVIATNIAETSITIPGIVYVIDPGFVKARWFNPN 511
I+P++ L EQ K+F+P A R+IV+ATN+AETS+T+PGI YVIDPG + ++
Sbjct: 331 IVPLYARLSAGEQNKIFQP--HAGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYR 388
Query: 512 TLTNSLVVVPISK 524
T L + PIS+
Sbjct: 389 TKVQRLPIEPISQ 401
Score = 240 (89.5 bits), Expect = 5.1e-21, Sum P(2) = 5.1e-21
Identities = 46/95 (48%), Positives = 67/95 (70%)
Query: 600 LIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTKIKYMTEGILMREM 659
LIG T+PRR++ S+ANR++EE+ T LG VGY +RF D D T+IK MT+GIL+ E+
Sbjct: 134 LIGHTQPRRLAARSVANRIAEEMETELGGFVGYKVRFTD-QISDQTQIKLMTDGILLAEI 192
Query: 660 MTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKIL 694
D L +Y I++DE HER++ D ++G LK++L
Sbjct: 193 QNDRFLNQYDTIIIDEAHERSLNIDFILGYLKQLL 227
Score = 153 (58.9 bits), Expect = 1.1e-14, Sum P(3) = 1.1e-14
Identities = 40/113 (35%), Positives = 64/113 (56%)
Query: 46 RLYTEASFSQLNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRVALELL 105
RLY+E F E T PE+ RT L+S +LQ+ ALG+ +I F F P +N++ + LL
Sbjct: 421 RLYSEEDFLSRPEFTDPEILRTNLASVILQMTALGLGDIEAFPFVEAPDKRNIQDGVRLL 480
Query: 106 YSLGAM-----DVNGNLTKPVGETMAEMPLHPIHAKVLLSSGSVLDSAVEILL 153
LGA+ D LT+ G+ +A +P+ P A+++L + S L E+++
Sbjct: 481 EELGAINDQIKDPKKRLTES-GKQLARLPIDPRLARMVLEA-SKLGCLKEVMI 531
Score = 100 (40.3 bits), Expect = 9.6e-26, Sum P(3) = 9.6e-26
Identities = 40/157 (25%), Positives = 66/157 (42%)
Query: 703 CSDEIASILSLLQVQDIFIKPSSGALSLKARVLRRNFEVEQGDLLTLLNIFKFYEKQEN- 761
C E+ I S L +QD +PS S + R F E D LTL+N++ + +Q+
Sbjct: 525 CLKEVMIIASALSIQDPRERPSDKQQSADDK--HRRFNHEDSDFLTLVNLWHYIGQQQKA 582
Query: 762 --KKQF---CHKYFFNYKVLKRAAELKNQMILLLKKSSIPLVTSPRNTNAVLKCLTNGFF 816
QF C + NY ++ ++ Q+ ++ L P + +AV + G
Sbjct: 583 LTSNQFRRQCKLDYLNYLRVREWQDVYTQLHQSTREMGFKLNDEPGSYHAVHSAILVGLL 642
Query: 817 SNAAYLHYS-GVYRTVRGNEDLYIHPSSVLYTLQQPQ 852
S+ Y R N I P+S L+ +QP+
Sbjct: 643 SHIGMKDQEKNEYHGAR-NARFNIFPASGLFK-KQPK 677
Score = 77 (32.2 bits), Expect = 9.6e-26, Sum P(3) = 9.6e-26
Identities = 13/38 (34%), Positives = 25/38 (65%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILM 38
MT+GIL+ +D + +Y I++D+ HER++ D ++
Sbjct: 183 MTDGILLAEIQNDRFLNQYDTIIIDEAHERSLNIDFIL 220
Score = 38 (18.4 bits), Expect = 2.1e-08, Sum P(3) = 2.1e-08
Identities = 14/61 (22%), Positives = 24/61 (39%)
Query: 310 VEPISQSYLVELSILAPGGQDVIGEDMKAFAEQLKPLKRTQLKLIISSATVDAEEICQFY 369
++P+ + S L G + K L ++ + K VD EE+ QFY
Sbjct: 751 IDPVLSREIFIRSALVEGDWETKHAFFKQNRALLAEVEELEHKSRRRDILVDDEELFQFY 810
Query: 370 N 370
+
Sbjct: 811 D 811
Score = 38 (18.4 bits), Expect = 2.1e-08, Sum P(3) = 2.1e-08
Identities = 23/86 (26%), Positives = 39/86 (45%)
Query: 423 AFVIGLEQIEHIIGILKQ----YHNQREDLKLLILPMHGSLPNNEQIKVFRPTPRAMRKI 478
A ++GL + HI G+ Q YH R + + I P G +F+ P K
Sbjct: 636 AILVGL--LSHI-GMKDQEKNEYHGAR-NARFNIFPASG---------LFKKQP----KW 678
Query: 479 VIATNIAETSITIPGIVYVIDPGFVK 504
V++ + ETS +V I+P +++
Sbjct: 679 VMSAELVETSKLWARVVAKIEPDWIE 704
>UNIPROTKB|F1NH89 [details] [associations]
symbol:LOC768812 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR001650 PROSITE:PS51194
GO:GO:0005524 GO:GO:0003676 GO:GO:0004386 InterPro:IPR014001
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GeneTree:ENSGT00650000093246 OMA:LACEQDI EMBL:AADN02057061
EMBL:AADN02057062 IPI:IPI00683398 Ensembl:ENSGALT00000023318
Uniprot:F1NH89
Length = 764
Score = 217 (81.4 bits), Expect = 1.1e-25, Sum P(2) = 1.1e-25
Identities = 40/82 (48%), Positives = 60/82 (73%)
Query: 614 LANRVSEELRTTLGHTVGYTIRFDDCTTEDVTKIKYMTEGILMREMMTDPLLRKYSVIML 673
LA R ++E+ +GH VGY + F+ C T + T ++Y T+ +L REMM+ PLL Y VI+L
Sbjct: 136 LALRAADEMDVNIGHEVGYFVPFESCCTAE-TILRYCTDDMLQREMMSAPLLNSYGVIIL 194
Query: 674 DEVHERTIFTDILMGLLKKILK 695
D+VHERT+ TD+L+G+LK +L+
Sbjct: 195 DDVHERTVPTDVLLGVLKHVLR 216
Score = 162 (62.1 bits), Expect = 1.1e-25, Sum P(2) = 1.1e-25
Identities = 47/166 (28%), Positives = 78/166 (46%)
Query: 701 FECSDEIASILSLLQVQDIFIKPSSGALSLKARVLRRNFEVEQGDLLTLLNIFK-FYEKQ 759
F C E+ I LL + F+ SG + A R F GD TL+N+F F E
Sbjct: 512 FTCHTEVLPIHVLLHAPNCFLHTPSGTEEI-ALTCWRKFSHPAGDHFTLINVFNAFREAS 570
Query: 760 ENK-------KQFCHKYFFNYKVLKRAAELKNQMILLLKKSSIPLVT----SPRNTNAVL 808
N +++C YF + L+ A ++ +++ ++K+ +P+ SP NT ++
Sbjct: 571 TNSAGQCCSNEKWCRNYFLSCSALRMAEMIRAELVEIMKRIELPISAPDFGSPENTLSIK 630
Query: 809 KCLTNGFFSNAAY-LHYSGVYRTVRGNEDLYIHP-SSVLYTLQQPQ 852
K L +G+F A + SG Y + + +HP SS YT + P+
Sbjct: 631 KALLSGYFMQIARDVDGSGNYLMLTHRQVAKLHPFSSYYYTRRSPE 676
Score = 120 (47.3 bits), Expect = 1.5e-18, Sum P(3) = 1.5e-18
Identities = 42/185 (22%), Positives = 89/185 (48%)
Query: 348 RTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYYSNDPVVNYVQGVVD 407
R L+L+I +A + ++ F + ++ V+ VY + P +++ +
Sbjct: 218 RPALRLVILTAPHMSSKLQDF-----CGSVPLIRVENEHQAEVVYTCSMPKDHFLSAL-R 271
Query: 408 TAIKIHESMPVGDILAFVIGLEQIEHIIGILKQYH-NQREDL-KLLILPMHGSL------ 459
++H + GDI+ F+ + I+ +++Q N DL +L+ +P++ +
Sbjct: 272 LLFELHHTKEKGDIVIFLACEQDIDKAYQMIRQEQSNSNPDLGELIPVPLYPTRNDLIPK 331
Query: 460 PNNEQIKVFRPTPRAMRKIVIATNIAETSITIPGIVYVIDPGFVKARWFNPNTLTNSLVV 519
PN ++ K ++ + RK+++ T+ + I I I +VID G + + +NP +S+
Sbjct: 332 PNQDKQKCYQ---KYRRKVLLTTSSGGSLIRIKNITFVIDVGVERRKVYNPRIRADSVTT 388
Query: 520 VPISK 524
PISK
Sbjct: 389 QPISK 393
Score = 77 (32.2 bits), Expect = 1.5e-18, Sum P(3) = 1.5e-18
Identities = 14/25 (56%), Positives = 19/25 (76%)
Query: 14 PSVEKYSVIMLDKVHERTIFTDILM 38
P + Y VI+LD VHERT+ TD+L+
Sbjct: 184 PLLNSYGVIILDDVHERTVPTDVLL 208
Score = 38 (18.4 bits), Expect = 3.3e-10, Sum P(3) = 3.3e-10
Identities = 8/20 (40%), Positives = 13/20 (65%)
Query: 434 IIGILKQYHNQREDLKLLIL 453
++G+LK R L+L+IL
Sbjct: 207 LLGVLKHVLRARPALRLVIL 226
>UNIPROTKB|H9KZI9 [details] [associations]
symbol:LOC100858239 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00575 PROSITE:PS00690
PROSITE:PS50126 GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR022967 SMART:SM00316
GeneTree:ENSGT00700000104241 EMBL:AADN02006936
Ensembl:ENSGALT00000013764 OMA:CRERERG Uniprot:H9KZI9
Length = 692
Score = 321 (118.1 bits), Expect = 2.2e-25, P = 2.2e-25
Identities = 66/116 (56%), Positives = 86/116 (74%)
Query: 587 QYLLEAGWCYDTKLIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTK 646
QYL EAG+ K IG T+PRR++ S+A RVSEE LG VGYTIRF+DCT+ + T
Sbjct: 510 QYLAEAGYTSRGK-IGCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPE-TV 567
Query: 647 IKYMTEGILMREMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKILKDKERDFE 702
IKYMT+G+L+RE + DP L +Y++IMLDE HERTI TD+L GLLKK ++ K +D +
Sbjct: 568 IKYMTDGMLLRECLIDPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQ-KRQDMK 622
Score = 130 (50.8 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 26/81 (32%), Positives = 47/81 (58%)
Query: 347 KRTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYYSNDPVVNYVQGVV 406
KR +KLI++SAT+DA + Q++ A I ++ G YPV + Y+ +P +Y+ +
Sbjct: 617 KRQDMKLIVTSATLDAVKFSQYFY-----EAPIFTIPGRTYPVEILYTKEPETDYLDASL 671
Query: 407 DTAIKIHESMPVGDILAFVIG 427
T ++IH + P G+ + + G
Sbjct: 672 ITVMQIHLTEPPGEWIVMIHG 692
Score = 106 (42.4 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 20/43 (46%), Positives = 30/43 (69%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILMECSRK 43
MT+G+L+ DP + +Y++IMLD+ HERTI TD+L +K
Sbjct: 571 MTDGMLLRECLIDPDLTQYAIIMLDEAHERTIHTDVLFGLLKK 613
>UNIPROTKB|P43329 [details] [associations]
symbol:hrpA species:83333 "Escherichia coli K-12"
[GO:0004386 "helicase activity" evidence=IEA;IMP] [GO:0009451 "RNA
modification" evidence=IMP] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0006397 "mRNA processing"
evidence=IMP] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR010222 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0006397 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:D42105
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
GO:GO:0009451 PIR:H64892 RefSeq:NP_415931.4 RefSeq:YP_489680.1
ProteinModelPortal:P43329 SMR:P43329 DIP:DIP-9937N IntAct:P43329
MINT:MINT-1229564 PRIDE:P43329 EnsemblBacteria:EBESCT00000000014
EnsemblBacteria:EBESCT00000015011 GeneID:12932513 GeneID:948444
KEGG:ecj:Y75_p1389 KEGG:eco:b1413 PATRIC:32118112 EchoBASE:EB2772
EcoGene:EG12936 HOGENOM:HOG000247272 KO:K03578 OMA:TYQFEPG
ProtClustDB:PRK11131 BioCyc:EcoCyc:G6732-MONOMER
BioCyc:ECOL316407:JW5905-MONOMER Genevestigator:P43329
InterPro:IPR024590 Pfam:PF11898 TIGRFAMs:TIGR01967 Uniprot:P43329
Length = 1300
Score = 265 (98.3 bits), Expect = 3.5e-25, Sum P(3) = 3.5e-25
Identities = 68/192 (35%), Positives = 108/192 (56%)
Query: 339 FAEQLKPLKRTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYY----- 393
+ ++L P +R LK+II+SAT+D E + +N NA I+ V G YPV V Y
Sbjct: 212 YLKELLP-RRPDLKIIITSATIDPERFSRHFN-----NAPIIEVSGRTYPVEVRYRPIVE 265
Query: 394 -SNDPVVNYVQGVVDTAIKIHESMPVGDILAFVIGLEQIEHIIGILKQYHNQREDLKLLI 452
++D + +Q + D ++ + GDIL F+ G +I L + + + + I
Sbjct: 266 EADDTERDQLQAIFDAVDELSQESH-GDILIFMSGEREIRDTADALNKLNLRHTE----I 320
Query: 453 LPMHGSLPNNEQIKVFRPTPRAMRKIVIATNIAETSITIPGIVYVIDPGFVKARWFNPNT 512
LP++ L N+EQ +VF+ + R+IV+ATN+AETS+T+PGI YVIDPG + ++ T
Sbjct: 321 LPLYARLSNSEQNRVFQS--HSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRT 378
Query: 513 LTNSLVVVPISK 524
L + PIS+
Sbjct: 379 KVQRLPIEPISQ 390
Score = 235 (87.8 bits), Expect = 5.0e-19, Sum P(2) = 5.0e-19
Identities = 44/95 (46%), Positives = 69/95 (72%)
Query: 600 LIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTKIKYMTEGILMREM 659
LIG T+PRR++ ++ANR++EEL+T G +GY +RF D +++ T +K MT+GIL+ E+
Sbjct: 124 LIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDN-TMVKLMTDGILLAEI 182
Query: 660 MTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKIL 694
D LL +Y I++DE HER++ D L+G LK++L
Sbjct: 183 QQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELL 217
Score = 159 (61.0 bits), Expect = 7.3e-10, Sum P(2) = 7.3e-10
Identities = 50/147 (34%), Positives = 77/147 (52%)
Query: 46 RLYTEASFSQLNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRVALELL 105
RLY+E F E T PE+ RT L+S +LQ+ ALG+ +I F F P +N++ + LL
Sbjct: 410 RLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLL 469
Query: 106 YSLGAM--DVNGNLTK--PVGETMAEMPLHPIHAKVLLSS---GSV-----LDSAVEILL 153
LGA+ D + K P+G ++++P+ P A+++L + G V + SA+ I
Sbjct: 470 EELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQD 529
Query: 154 HRLRGLCDNVDSGPET---FHDHEMCF 177
R R + D + E FHD E F
Sbjct: 530 PRERPM-DKQQASDEKHRRFHDKESDF 555
Score = 86 (35.3 bits), Expect = 3.5e-25, Sum P(3) = 3.5e-25
Identities = 31/150 (20%), Positives = 59/150 (39%)
Query: 703 CSDEIASILSLLQVQDIFIKPSSGALSLKARVLRRNFEVEQGDLLTLLNIFKFYEKQENK 762
C E I S L +QD +P + + R F ++ D L +N++ + +Q+
Sbjct: 514 CVREAMIITSALSIQDPRERPMDKQQASDEK--HRRFHDKESDFLAFVNLWNYLGEQQKA 571
Query: 763 ------KQFCHKYFFNYKVLKRAAELKNQMILLLKKSSIPLVTSPRNTNAVLKCLTNGFF 816
++ C + NY ++ ++ Q+ ++K+ IP+ + P + L G
Sbjct: 572 LSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEYREIHIALLTGLL 631
Query: 817 SNAAYLHYSGVYRTVRGNEDLYIHPSSVLY 846
S+ T N I P S L+
Sbjct: 632 SHIGMKDADKQEYTGARNARFSIFPGSGLF 661
Score = 76 (31.8 bits), Expect = 3.5e-25, Sum P(3) = 3.5e-25
Identities = 14/38 (36%), Positives = 24/38 (63%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILM 38
MT+GIL+ D + +Y I++D+ HER++ D L+
Sbjct: 173 MTDGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLL 210
>TAIR|locus:2147785 [details] [associations]
symbol:AT5G14900 species:3702 "Arabidopsis thaliana"
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] InterPro:IPR007502 Pfam:PF04408 SMART:SM00847
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0004386
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 HOGENOM:HOG000175261
KO:K12820 EMBL:AL391146 OMA:IRTVTHI IPI:IPI00537280 PIR:T51435
RefSeq:NP_196994.1 UniGene:At.65514 ProteinModelPortal:Q9LFR5
SMR:Q9LFR5 EnsemblPlants:AT5G14900.1 GeneID:831342
KEGG:ath:AT5G14900 TAIR:At5g14900 InParanoid:Q9LFR5
PhylomeDB:Q9LFR5 ProtClustDB:CLSN2916823 Genevestigator:Q9LFR5
Uniprot:Q9LFR5
Length = 301
Score = 201 (75.8 bits), Expect = 5.1e-25, Sum P(2) = 5.1e-25
Identities = 48/151 (31%), Positives = 79/151 (52%)
Query: 701 FECSDEIASILSLLQVQDIFIKPSSGALSLKARVLRRNFEVEQGDLLTLLNIFKFYEKQE 760
F CS+EI SI ++L V + FI+P G A + +F GD LTLLN+F + +
Sbjct: 78 FNCSNEILSISAMLSVPNCFIRPR-GEAQKAADEAKSSFAHIDGDHLTLLNLFHAFLQNN 136
Query: 761 NKKQFCHKYFFNYKVLKRAAELKNQMILLLKKSSIPLVTSPRNTNA----VLKCLTNGFF 816
+C F NY+ +K A ++ Q++ ++ + I L + N+ + K L G+F
Sbjct: 137 QDPNWCCTKFINYRAMKSAVSVREQLVRIMLRFQIKLCSPDFNSRDYYVNIRKALLAGYF 196
Query: 817 SNAAYLHYSGVYRTVRGNED--LYIHPSSVL 845
A+L +G Y T R +D +++HPS+ L
Sbjct: 197 MQVAHLERTGHYLTFRDKDDQVVHLHPSNCL 227
Score = 149 (57.5 bits), Expect = 5.1e-25, Sum P(2) = 5.1e-25
Identities = 35/75 (46%), Positives = 46/75 (61%)
Query: 67 TELSSAVLQLKALGIHNILRFSFPSPPPAQNLRVALELLYSLGAMDVNGNLTKPVGETMA 126
T L++ VL LK L + N++RF P L AL+ LY LGA+D + NLTK GE M+
Sbjct: 2 TNLANTVLTLKGLSVKNLVRFDLIDSPAPDTLARALDDLYHLGALDDDCNLTK-TGEMMS 60
Query: 127 EMPLHPIHAKVLLSS 141
E PL P AK+L+ S
Sbjct: 61 EFPLDPQMAKMLIVS 75
>UNIPROTKB|F1SDM5 [details] [associations]
symbol:DHX32 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0004386 "helicase activity" evidence=IEA]
InterPro:IPR007502 Pfam:PF04408 SMART:SM00847 GO:GO:0004386
InterPro:IPR011709 Pfam:PF07717 GeneTree:ENSGT00650000093246
OMA:LACEQDI EMBL:CT841550 Ensembl:ENSSSCT00000011756 Uniprot:F1SDM5
Length = 742
Score = 220 (82.5 bits), Expect = 6.8e-25, Sum P(2) = 6.8e-25
Identities = 42/91 (46%), Positives = 64/91 (70%)
Query: 604 TEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTKIKYMTEGILMREMMTDP 663
T+ + + LA RV++E+ +GH VGY I F++C T + T ++Y T+ +L REMM++P
Sbjct: 116 TQVHKQTAVQLALRVADEMDVNIGHEVGYVIPFENCCTSE-TILRYCTDDMLQREMMSNP 174
Query: 664 LLRKYSVIMLDEVHERTIFTDILMGLLKKIL 694
L Y VI+LD+V ER+I TD+L+GLLK +L
Sbjct: 175 FLGSYGVIILDDVQERSIATDVLLGLLKDVL 205
Score = 151 (58.2 bits), Expect = 6.8e-25, Sum P(2) = 6.8e-25
Identities = 47/177 (26%), Positives = 85/177 (48%)
Query: 689 LLKKILKDKERDFECSDEIASILSLLQVQDIFIKPSSGALSLKARVLRRNFEVEQGDLLT 748
L K IL E F+C DE+ +I +++ + F SGA +A + F +GD T
Sbjct: 492 LSKSILASCE--FDCVDEMLTIAAMVTAPNCFSHLPSGA-EAEALTCWKTFLHPEGDHFT 548
Query: 749 LLNIFKFYE-------KQENKKQFCHKYFFNYKVLKRAAELKNQMILLLKKSSIPLVT-- 799
L+N++K ++ + +++CH YF N L+ A ++ +++ ++K+ +P
Sbjct: 549 LVNLYKAFQDVTLNSTSEHCVEKWCHDYFLNCSALRMADVIRAELLEIIKRIELPYAEPA 608
Query: 800 --SPRNTNAVLKCLTNGFFSNAAY-LHYSGVYRTVRGNEDLYIHPSSVL-YTLQQPQ 852
S NT + K L +G+F A + SG Y + + +HP S T + P+
Sbjct: 609 FGSKENTLNIKKALLSGYFMQIARDVDGSGNYLMLTHKQVAQLHPLSCYSVTKKMPE 665
Score = 136 (52.9 bits), Expect = 1.3e-17, Sum P(4) = 1.3e-17
Identities = 52/189 (27%), Positives = 91/189 (48%)
Query: 346 LKRTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYYSNDPVVNYVQGV 405
L R +LKLII+S+ + +Y N ++ V PV V Y + ++ V
Sbjct: 206 LARPELKLIINSSPHLISTLSSYYG-----NVPLIEVTSKR-PVEVVYLSGAQKEALEAV 259
Query: 406 VDTAIKIHESMPVGDILAFVIGLEQIEHIIGILKQYH-NQREDL-KLLILPMHGSLPNNE 463
+ +IH S GDI+ F+ + IE I+ Q N DL +L+++P++ P E
Sbjct: 260 LRLIFEIHHSGEEGDIVVFLACEQDIEKAYEIVCQEGTNLNPDLGELVVVPLY---PK-E 315
Query: 464 QIKVFRPTPRA-------MRKIVIATNIAETSITIPGIVYVIDPGFVKARW-FNPNTLTN 515
+ +F+P A R++V+ + E+ I + +VID G + + ++P +
Sbjct: 316 KCALFKPNDEAEKRCQVYQRRVVLTASSGESLIWSNTVRFVIDVGVERRKKVYSPRIRAD 375
Query: 516 SLVVVPISK 524
SLV+ PIS+
Sbjct: 376 SLVLQPISQ 384
Score = 128 (50.1 bits), Expect = 2.6e-17, Sum P(3) = 2.6e-17
Identities = 38/102 (37%), Positives = 56/102 (54%)
Query: 41 SRKFSRLYTEASFSQ-LNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLR 99
S K LY+E S+ + P EMQ L+S VL +K + I + F + P ++L
Sbjct: 399 SGKLFCLYSEEFASKDMRPLKPAEMQHANLTSMVLFMKRVDIAGLGHCDFMNRPAPESLM 458
Query: 100 VALELLYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLLSS 141
ALE L L A+D +GNL++ G M+E PL P +K +L+S
Sbjct: 459 QALEDLDYLAALDNDGNLSE-FGIIMSEFPLDPQLSKSILAS 499
Score = 68 (29.0 bits), Expect = 1.3e-17, Sum P(4) = 1.3e-17
Identities = 15/37 (40%), Positives = 23/37 (62%)
Query: 2 TEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILM 38
T+ +L +P + Y VI+LD V ER+I TD+L+
Sbjct: 162 TDDMLQREMMSNPFLGSYGVIILDDVQERSIATDVLL 198
Score = 38 (18.4 bits), Expect = 7.3e-08, Sum P(4) = 7.3e-08
Identities = 8/19 (42%), Positives = 13/19 (68%)
Query: 434 IIGILKQYHNQREDLKLLI 452
++G+LK R +LKL+I
Sbjct: 197 LLGLLKDVLLARPELKLII 215
Score = 37 (18.1 bits), Expect = 1.3e-17, Sum P(4) = 1.3e-17
Identities = 8/15 (53%), Positives = 9/15 (60%)
Query: 653 GILMREMMTDPLLRK 667
GI+M E DP L K
Sbjct: 480 GIIMSEFPLDPQLSK 494
>UNIPROTKB|Q7L7V1 [details] [associations]
symbol:DHX32 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX32" species:9606 "Homo sapiens"
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] InterPro:IPR007502
Pfam:PF04408 PROSITE:PS51194 SMART:SM00847 GO:GO:0005739
GO:GO:0005524 GO:GO:0005634 EMBL:CH471066 GO:GO:0004386
InterPro:IPR014001 PROSITE:PS51192 EMBL:AY064247 EMBL:AL360176
UniGene:Hs.370292 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
HOVERGEN:HBG039428 EMBL:AF427340 EMBL:AF427341 EMBL:AY064250
EMBL:AK001556 EMBL:AK001751 EMBL:AK024869 EMBL:BC002473
EMBL:BC037925 EMBL:BC068471 EMBL:AL162051 IPI:IPI00334601
IPI:IPI00644447 PIR:T47184 RefSeq:NP_060650.2
ProteinModelPortal:Q7L7V1 SMR:Q7L7V1 IntAct:Q7L7V1 STRING:Q7L7V1
PhosphoSite:Q7L7V1 DMDM:74759011 PRIDE:Q7L7V1 DNASU:55760
Ensembl:ENST00000284688 Ensembl:ENST00000284690
Ensembl:ENST00000368721 Ensembl:ENST00000415732 GeneID:55760
KEGG:hsa:55760 UCSC:uc001lje.1 UCSC:uc001ljf.1 CTD:55760
GeneCards:GC10M127515 HGNC:HGNC:16717 HPA:HPA048872 MIM:607960
neXtProt:NX_Q7L7V1 PharmGKB:PA27219 InParanoid:Q7L7V1 OMA:LACEQDI
OrthoDB:EOG4N30NF PhylomeDB:Q7L7V1 ChiTaRS:DHX32 GenomeRNAi:55760
NextBio:60779 Bgee:Q7L7V1 Genevestigator:Q7L7V1 Uniprot:Q7L7V1
Length = 743
Score = 231 (86.4 bits), Expect = 7.7e-25, Sum P(2) = 7.7e-25
Identities = 43/91 (47%), Positives = 66/91 (72%)
Query: 604 TEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTKIKYMTEGILMREMMTDP 663
T+ + +V LA RV++E+ +GH VGY I F++C T + T ++Y T+ +L REMM++P
Sbjct: 116 TQVHKQTVVQLALRVADEMDVNIGHEVGYVIPFENCCTNE-TILRYCTDDMLQREMMSNP 174
Query: 664 LLRKYSVIMLDEVHERTIFTDILMGLLKKIL 694
L Y VI+LD++HER+I TD+L+GLLK +L
Sbjct: 175 FLGSYGVIILDDIHERSIATDVLLGLLKDVL 205
Score = 176 (67.0 bits), Expect = 2.4e-21, Sum P(4) = 2.4e-21
Identities = 53/187 (28%), Positives = 94/187 (50%)
Query: 346 LKRTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYYSNDPVVNYVQGV 405
L R +LKLII+S+ ++ +Y N ++ VK +PV V Y ++ + + +
Sbjct: 206 LARPELKLIINSSPHLISKLNSYYG-----NVPVIEVKNK-HPVEVVYLSEAQKDSFESI 259
Query: 406 VDTAIKIHESMPVGDILAFVIGLEQIEHIIGILKQYHNQREDL-KLLILPMHGSLPNNEQ 464
+ +IH S GDI+ F+ + IE + + Q N DL +L+++P++ P E+
Sbjct: 260 LRLIFEIHHSGEKGDIVVFLACEQDIEKVCETVYQGSNLNPDLGELVVVPLY---PK-EK 315
Query: 465 IKVFRPTPRA-------MRKIVIATNIAETSITIPGIVYVIDPGFVKARWFNPNTLTNSL 517
+F+P R++V+ T+ E I + +VID G + + +NP NSL
Sbjct: 316 CSLFKPLDETEKRCQVYQRRVVLTTSSGEFLIWSNSVRFVIDVGVERRKVYNPRIRANSL 375
Query: 518 VVVPISK 524
V+ PIS+
Sbjct: 376 VMQPISQ 382
Score = 145 (56.1 bits), Expect = 1.7e-15, Sum P(2) = 1.7e-15
Identities = 49/144 (34%), Positives = 73/144 (50%)
Query: 12 HDPSVEKYSVIMLD-KVHERTIFTDIL-MECSRKFSRLYTEASFSQ-LNECTPPEMQRTE 68
++P + S++M + I IL S KF LYTE S+ + P EMQ
Sbjct: 366 YNPRIRANSLVMQPISQSQAEIRKQILGSSSSGKFFCLYTEEFASKDMTPLKPAEMQEAN 425
Query: 69 LSSAVLQLKALGIHNILRFSFPSPPPAQNLRVALELLYSLGAMDVNGNLTKPVGETMAEM 128
L+S VL +K + I + F + P ++L ALE L L A+D +GNL++ G M+E
Sbjct: 426 LTSMVLFMKRIDIAGLGHCDFMNRPAPESLMQALEDLDYLAALDNDGNLSE-FGIIMSEF 484
Query: 129 PLHPIHAKVLLSSGSVLDSAVEIL 152
PL P +K +L+S D E+L
Sbjct: 485 PLDPQLSKSILASCE-FDCVDEVL 507
Score = 139 (54.0 bits), Expect = 7.7e-25, Sum P(2) = 7.7e-25
Identities = 47/177 (26%), Positives = 82/177 (46%)
Query: 689 LLKKILKDKERDFECSDEIASILSLLQVQDIFIKPSSGALSLKARVLRRNFEVEQGDLLT 748
L K IL E F+C DE+ +I +++ + F GA A + F +GD T
Sbjct: 490 LSKSILASCE--FDCVDEVLTIAAMVTAPNCFSHVPHGAEEA-ALTCWKTFLHPEGDHFT 546
Query: 749 LLNIFKFYEKQE-NK------KQFCHKYFFNYKVLKRAAELKNQMILLLKKSSIPLVT-- 799
L++I+K Y+ N +++C YF N L+ A ++ +++ ++K+ +P
Sbjct: 547 LISIYKAYQDTTLNSSSEYCVEKWCRDYFLNCSALRMADVIRAELLEIIKRIELPYAEPA 606
Query: 800 --SPRNTNAVLKCLTNGFFSNAAY-LHYSGVYRTVRGNEDLYIHP-SSVLYTLQQPQ 852
S NT + K L +G+F A + SG Y + + +HP S T + P+
Sbjct: 607 FGSKENTLNIKKALLSGYFMQIARDVDGSGNYLMLTHKQVAQLHPLSGYSITKKMPE 663
Score = 75 (31.5 bits), Expect = 2.4e-21, Sum P(4) = 2.4e-21
Identities = 15/37 (40%), Positives = 24/37 (64%)
Query: 2 TEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILM 38
T+ +L +P + Y VI+LD +HER+I TD+L+
Sbjct: 162 TDDMLQREMMSNPFLGSYGVIILDDIHERSIATDVLL 198
Score = 38 (18.4 bits), Expect = 2.7e-07, Sum P(4) = 2.7e-07
Identities = 8/19 (42%), Positives = 13/19 (68%)
Query: 434 IIGILKQYHNQREDLKLLI 452
++G+LK R +LKL+I
Sbjct: 197 LLGLLKDVLLARPELKLII 215
Score = 37 (18.1 bits), Expect = 2.4e-21, Sum P(4) = 2.4e-21
Identities = 8/15 (53%), Positives = 9/15 (60%)
Query: 653 GILMREMMTDPLLRK 667
GI+M E DP L K
Sbjct: 478 GIIMSEFPLDPQLSK 492
>UNIPROTKB|A7MBI4 [details] [associations]
symbol:DHX32 "DHX32 protein" species:9913 "Bos taurus"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] InterPro:IPR007502 Pfam:PF04408
SMART:SM00847 GO:GO:0005524 GO:GO:0004386 InterPro:IPR014001
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
HOGENOM:HOG000175261 GeneTree:ENSGT00650000093246
HOVERGEN:HBG039428 CTD:55760 OMA:LACEQDI OrthoDB:EOG4N30NF
EMBL:DAAA02059534 EMBL:DAAA02059535 EMBL:DAAA02059536 EMBL:BC151578
IPI:IPI00715161 RefSeq:NP_001094614.1 UniGene:Bt.44006
Ensembl:ENSBTAT00000007619 GeneID:532978 KEGG:bta:532978
InParanoid:A7MBI4 NextBio:20875863 Uniprot:A7MBI4
Length = 744
Score = 224 (83.9 bits), Expect = 2.2e-24, Sum P(2) = 2.2e-24
Identities = 41/91 (45%), Positives = 65/91 (71%)
Query: 604 TEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTKIKYMTEGILMREMMTDP 663
T+ + + LA RV++E+ +GH VGY I F++C T + T ++Y T+ +L REMM++P
Sbjct: 116 TQVHKPTAVQLALRVADEMDVNIGHEVGYVIPFENCCTSE-TILRYCTDDMLQREMMSNP 174
Query: 664 LLRKYSVIMLDEVHERTIFTDILMGLLKKIL 694
L Y VI+LD++HER++ TD+L+GLLK +L
Sbjct: 175 FLGSYGVIILDDIHERSMATDVLLGLLKDVL 205
Score = 156 (60.0 bits), Expect = 3.7e-19, Sum P(4) = 3.7e-19
Identities = 52/188 (27%), Positives = 91/188 (48%)
Query: 346 LKRTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYYSNDPVVNYVQGV 405
L R +LKLII+S+ ++ +Y N ++ VK +PV Y + + +
Sbjct: 206 LARPELKLIINSSPHLINKLSSYYG-----NVPLIQVKNK-HPVEAVYLSGAQKESFESI 259
Query: 406 VDTAIKIHESMPVGDILAFVIGLEQIEHIIGILKQY-HNQREDL-KLLILPMHGSLPNNE 463
+ +IH S GDI+ F+ + IE I+ Q N DL +L+++P++ P E
Sbjct: 260 LRLIFEIHHSGEKGDIVVFLACEQDIEKAYEIVCQEGSNLNPDLGELVVVPLY---PK-E 315
Query: 464 QIKVFRPT-------PRAMRKIVIATNIAETSITIPGIVYVIDPGFVKARWFNPNTLTNS 516
+ +F+P P R++V+ + E+ I + +VID G + + +NP +S
Sbjct: 316 KCALFKPNDETEKRCPVYQRRVVLTASSGESLICSNTVKFVIDVGVERRKVYNPRIRADS 375
Query: 517 LVVVPISK 524
LV PIS+
Sbjct: 376 LVTQPISQ 383
Score = 142 (55.0 bits), Expect = 2.2e-24, Sum P(2) = 2.2e-24
Identities = 45/167 (26%), Positives = 78/167 (46%)
Query: 689 LLKKILKDKERDFECSDEIASILSLLQVQDIFIKPSSGALSLKARVLRRNFEVEQGDLLT 748
L K IL E F+C DE+ +I +++ + F GA A + F GD T
Sbjct: 491 LSKSILASCE--FDCVDEMLTIAAMVTAPNCFSHLPRGAEEA-ALSCWKTFLHPDGDHFT 547
Query: 749 LLNIFKFYE-------KQENKKQFCHKYFFNYKVLKRAAELKNQMILLLKKSSIPLVT-- 799
L+NI+K Y+ + +++CH YF N L+ A ++ +++ ++K+ +P
Sbjct: 548 LINIYKAYQDMTLNAASEHCVEKWCHDYFLNCSALRTAEVIRAELLEIIKRIELPYTEPA 607
Query: 800 --SPRNTNAVLKCLTNGFFSNAAY-LHYSGVYRTVRGNEDLYIHPSS 843
S NT + K L +G+F A + +G Y + + +HP S
Sbjct: 608 FGSKENTLNIKKALLSGYFMQIARDVDGAGNYLMLTHKQVAQLHPLS 654
Score = 128 (50.1 bits), Expect = 9.6e-17, Sum P(3) = 9.6e-17
Identities = 38/102 (37%), Positives = 56/102 (54%)
Query: 41 SRKFSRLYTEASFSQ-LNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLR 99
S K LY+E S+ + P EMQ L+S VL +K + I + F + P ++L
Sbjct: 398 SGKLFCLYSEEFASRDMQPLKPAEMQEANLTSMVLFMKRVDIAGLGHCDFMNRPAPESLM 457
Query: 100 VALELLYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLLSS 141
ALE L L A+D +GNL++ G M+E PL P +K +L+S
Sbjct: 458 QALEDLDYLAALDNDGNLSE-FGIIMSEFPLDPQLSKSILAS 498
Score = 72 (30.4 bits), Expect = 3.7e-19, Sum P(4) = 3.7e-19
Identities = 14/37 (37%), Positives = 24/37 (64%)
Query: 2 TEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILM 38
T+ +L +P + Y VI+LD +HER++ TD+L+
Sbjct: 162 TDDMLQREMMSNPFLGSYGVIILDDIHERSMATDVLL 198
Score = 38 (18.4 bits), Expect = 2.6e-07, Sum P(4) = 2.6e-07
Identities = 8/19 (42%), Positives = 13/19 (68%)
Query: 434 IIGILKQYHNQREDLKLLI 452
++G+LK R +LKL+I
Sbjct: 197 LLGLLKDVLLARPELKLII 215
Score = 37 (18.1 bits), Expect = 3.7e-19, Sum P(4) = 3.7e-19
Identities = 8/15 (53%), Positives = 9/15 (60%)
Query: 653 GILMREMMTDPLLRK 667
GI+M E DP L K
Sbjct: 479 GIIMSEFPLDPQLSK 493
>TAIR|locus:2142459 [details] [associations]
symbol:AT5G10370 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0004386
"helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR002867
InterPro:IPR004087 InterPro:IPR007087 InterPro:IPR007502
InterPro:IPR011545 InterPro:IPR015880 Pfam:PF00270 Pfam:PF00271
Pfam:PF01485 Pfam:PF04408 PROSITE:PS00028 PROSITE:PS00690
PROSITE:PS50089 PROSITE:PS51194 SMART:SM00184 SMART:SM00322
SMART:SM00355 SMART:SM00490 SMART:SM00647 SMART:SM00847
Pfam:PF00097 Prosite:PS00518 GO:GO:0005524 EMBL:CP002688
GO:GO:0046872 GO:GO:0008270 GO:GO:0003723 GO:GO:0005622
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K12818 IPI:IPI00548793
RefSeq:NP_196599.2 UniGene:At.49004 PRIDE:F4KGU4
EnsemblPlants:AT5G10370.1 GeneID:830901 KEGG:ath:AT5G10370
OMA:HQEPEIR ArrayExpress:F4KGU4 Uniprot:F4KGU4
Length = 1775
Score = 260 (96.6 bits), Expect = 6.4e-24, Sum P(3) = 6.4e-24
Identities = 71/193 (36%), Positives = 107/193 (55%)
Query: 343 LKPL--KRTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYYS-NDP-- 397
LK L +R L+L+I SAT DA+++ Q++ + IL V G +PV + YS +D
Sbjct: 443 LKKLLSRRIDLRLVIMSATADAKQLSQYF-----FSCGILLVNGRNFPVEIVYSPSDTEE 497
Query: 398 ------VVNYVQGVVDTAIKIHESMPVGDILAFVIGLEQIEHIIGILKQYHNQREDLKLL 451
+ +YV VV A++IH++ G ILAF+ ++E +++ +
Sbjct: 498 NSVVGGIASYVGDVVKMAVEIHKTEKEGTILAFLTSQAEVEWAC---ERFITP----SAI 550
Query: 452 ILPMHGSLPNNEQIKVFRPTPRAMRKIVIATNIAETSITIPGIVYVIDPGFVKARWFNPN 511
LP+HG L EQ +VF+ P RK++ ATNIAETS+TIPG+ YVID G VK + P
Sbjct: 551 ALPLHGKLSFEEQFRVFQNHP-GRRKVIFATNIAETSLTIPGVKYVIDSGMVKESKYEPR 609
Query: 512 TLTNSLVVVPISK 524
T + L V +S+
Sbjct: 610 TGMSILKVCRVSQ 622
Score = 173 (66.0 bits), Expect = 9.6e-09, P = 9.6e-09
Identities = 41/110 (37%), Positives = 68/110 (61%)
Query: 587 QYLLEAGWCYDTKLIGITEPRRISVTSLANRVSEELRTTLG-HTVGYTIRFDDCTTEDVT 645
Q+L ++G ++ T+PR+I+ +LA+RV EE +TV T F +TE+++
Sbjct: 341 QFLADSGVAASESIV-CTQPRKIAAMTLADRVREESSGCYEENTVSCTPTFS--STEEIS 397
Query: 646 -KIKYMTEGILMREMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKIL 694
K+ YMT+ L++ M D L S +++DE HER++ TD+L+ LLKK+L
Sbjct: 398 SKVVYMTDNCLLQHYMKDRSLSGISCVIIDEAHERSLNTDLLLALLKKLL 447
Score = 135 (52.6 bits), Expect = 2.1e-06, Sum P(3) = 2.1e-06
Identities = 33/97 (34%), Positives = 57/97 (58%)
Query: 46 RLYTEASFSQLNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRVALELL 105
RLY++ F +N PE++R L A+L++ ALG++NI F+F P + + +A++ L
Sbjct: 642 RLYSKNDFDSMNLNQEPEIRRVHLGVALLRMLALGVNNIAEFNFVDAPVPEAIAMAVQNL 701
Query: 106 YSLGAM-DVNG--NLTKPVGETMAEMPLHPIHAKVLL 139
LGA+ + NG LT+ G + ++ L P K++L
Sbjct: 702 VQLGAVVEKNGVHELTQE-GHCLVKLGLEPKLGKLIL 737
Score = 85 (35.0 bits), Expect = 6.4e-24, Sum P(3) = 6.4e-24
Identities = 51/214 (23%), Positives = 93/214 (43%)
Query: 659 MMTDPLLRKYSVIMLDEVHERTIFTDIL--MGL---LKKILKDKERDFECSDEIASILSL 713
M L++ +V+ + VHE T L +GL L K++ R + I +
Sbjct: 696 MAVQNLVQLGAVVEKNGVHELTQEGHCLVKLGLEPKLGKLILGCFRHRMGKEGIVLAAVM 755
Query: 714 LQVQDIFIKPSSGALSLKARVLRRNFEVEQGDLLTLLNIFKFYEK--QENKKQFCHKYFF 771
IF + + +KA L+ F + GDL TLL+++K + +E + ++C +
Sbjct: 756 ANASSIFCRVGNFDDKMKADRLKVQFCNQNGDLFTLLSVYKEWASLPRERRNKWCWENSL 815
Query: 772 NYKVLKRAAELKNQMILLLKKSSIPLVTSPR----NTNAVLK-------CLTNGFFSNAA 820
N K ++R + ++ + +++ + LV SP N N K + N A
Sbjct: 816 NAKSMRRCEDTVKELEICIERE-LTLV-SPSYWVWNPNEGTKHDKHLKMVILASLAENVA 873
Query: 821 -YLHYSGV-YRTVRGNEDLYIHPS-SVLYTLQQP 851
Y Y+ + Y + + +HPS S+L Q+P
Sbjct: 874 MYTGYNQLGYEVALTGQQVQLHPSCSLLAFGQKP 907
Score = 75 (31.5 bits), Expect = 6.4e-24, Sum P(3) = 6.4e-24
Identities = 14/43 (32%), Positives = 28/43 (65%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILMECSRK 43
MT+ L+++ D S+ S +++D+ HER++ TD+L+ +K
Sbjct: 403 MTDNCLLQHYMKDRSLSGISCVIIDEAHERSLNTDLLLALLKK 445
Score = 43 (20.2 bits), Expect = 1.3e-19, Sum P(3) = 1.3e-19
Identities = 26/93 (27%), Positives = 42/93 (45%)
Query: 608 RISVTSLANRVSEELRTTLGHTV-GYTIRFDDCTTEDVTKIKYMTEGI-LMREMMTDPLL 665
R+ +T+ A R E+R L + G I T V + +GI LMR++ +
Sbjct: 1383 RVKITAYATRPVAEMRRELEELLRGRPINHPGFTRR-VLQHLMSRDGINLMRKIQQET-- 1439
Query: 666 RKYSVIMLDEVHERTIFTDILMGLLKKILKDKE 698
Y I+LD H T+ + G +KI K ++
Sbjct: 1440 ETY--ILLDR-HNLTVR---ICGTSEKIAKAEQ 1466
>UNIPROTKB|F1PER1 [details] [associations]
symbol:DHX32 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] InterPro:IPR007502
Pfam:PF04408 SMART:SM00847 GO:GO:0005524 GO:GO:0004386
InterPro:IPR014001 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GeneTree:ENSGT00650000093246 CTD:55760 OMA:LACEQDI
EMBL:AAEX03015636 RefSeq:XP_003433686.1 Ensembl:ENSCAFT00000020520
GeneID:100685023 KEGG:cfa:100685023 Uniprot:F1PER1
Length = 745
Score = 221 (82.9 bits), Expect = 7.6e-24, Sum P(2) = 7.6e-24
Identities = 41/91 (45%), Positives = 64/91 (70%)
Query: 604 TEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTKIKYMTEGILMREMMTDP 663
T+ + + LA RV++E+ +GH VGY I F++C + + T ++Y T+ +L REMM+ P
Sbjct: 116 TQVHKPTAVQLALRVADEMDVNIGHEVGYMIPFENCCSSE-TILRYCTDDMLQREMMSSP 174
Query: 664 LLRKYSVIMLDEVHERTIFTDILMGLLKKIL 694
L Y VI+LD++HER+I TD+L+GLLK +L
Sbjct: 175 FLGNYGVIILDDIHERSIATDVLLGLLKDVL 205
Score = 163 (62.4 bits), Expect = 6.4e-20, Sum P(4) = 6.4e-20
Identities = 53/188 (28%), Positives = 93/188 (49%)
Query: 346 LKRTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYYSNDPVVNYVQGV 405
L R +LKLII+S+ ++ +Y N ++ VK +PV V Y + ++ +
Sbjct: 206 LARPELKLIINSSPHLISKLSSYYG-----NVPLIEVKKQ-HPVEVVYLSGAQKESLESI 259
Query: 406 VDTAIKIHESMPVGDILAFVIGLEQIEHIIGILKQY-HNQREDL-KLLILPMHGSLPNNE 463
+ +IH+S GDI+ F+ + IE I+ Q N DL +L+++P++ P E
Sbjct: 260 LRLIFEIHQSGEKGDIVVFLACEQDIEKAYEIVCQEGSNLNPDLGELVVVPLY---PK-E 315
Query: 464 QIKVFRPTPRA-------MRKIVIATNIAETSITIPGIVYVIDPGFVKARWFNPNTLTNS 516
+ +F+P R++V+ + E+ I + +VID G + + +NP NS
Sbjct: 316 KCALFKPNDETEKRCQVYQRRVVLTASSGESLIWSNTVRFVIDVGVERRKVYNPRIRANS 375
Query: 517 LVVVPISK 524
LV PIS+
Sbjct: 376 LVTQPISQ 383
Score = 140 (54.3 bits), Expect = 7.6e-24, Sum P(2) = 7.6e-24
Identities = 47/177 (26%), Positives = 82/177 (46%)
Query: 689 LLKKILKDKERDFECSDEIASILSLLQVQDIFIKPSSGALSLKARVLRRNFEVEQGDLLT 748
L K IL E F+C +E+ +I +++ + F GA A + F +GD T
Sbjct: 491 LSKSILASCE--FDCVEEMLTIAAMVTAPNCFSNLPHGAEEA-ALTCWKTFLHPEGDHFT 547
Query: 749 LLNIFKFYE-------KQENKKQFCHKYFFNYKVLKRAAELKNQMILLLKKSSIPLVT-- 799
L+NI+K Y+ +++CH YF N L+ A ++ +++ ++K+ +P
Sbjct: 548 LINIYKAYQDIALNSTSDHCVEKWCHDYFLNCCALRMADVIRAELLEIVKRIELPCAEPA 607
Query: 800 --SPRNTNAVLKCLTNGFFSNAAY-LHYSGVYRTVRGNEDLYIHP-SSVLYTLQQPQ 852
S N + K L +G+F A + SG Y + + +HP SS T + P+
Sbjct: 608 FGSKENALNIKKALLSGYFMQIARDVDGSGNYLMLTHKQVAQLHPLSSYSITKKMPE 664
Score = 129 (50.5 bits), Expect = 7.8e-17, Sum P(3) = 7.8e-17
Identities = 41/113 (36%), Positives = 60/113 (53%)
Query: 41 SRKFSRLYTEASFSQ-LNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLR 99
S K LY+E S+ + P EMQ L+S VL +K + I + F + P ++L
Sbjct: 398 SGKLFCLYSEEFASKDMRPLKPAEMQEANLTSMVLFMKRVDIAGLGHCDFMNRPAPESLM 457
Query: 100 VALELLYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLLSSGSVLDSAVEIL 152
ALE L L A+D +GNL++ G M+E PL P +K +L+S D E+L
Sbjct: 458 QALEDLDYLAALDNDGNLSE-FGIIMSEFPLDPQLSKSILASCE-FDCVEEML 508
Score = 74 (31.1 bits), Expect = 6.4e-20, Sum P(4) = 6.4e-20
Identities = 15/37 (40%), Positives = 23/37 (62%)
Query: 2 TEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILM 38
T+ +L P + Y VI+LD +HER+I TD+L+
Sbjct: 162 TDDMLQREMMSSPFLGNYGVIILDDIHERSIATDVLL 198
Score = 38 (18.4 bits), Expect = 2.7e-07, Sum P(4) = 2.7e-07
Identities = 8/19 (42%), Positives = 13/19 (68%)
Query: 434 IIGILKQYHNQREDLKLLI 452
++G+LK R +LKL+I
Sbjct: 197 LLGLLKDVLLARPELKLII 215
Score = 37 (18.1 bits), Expect = 6.4e-20, Sum P(4) = 6.4e-20
Identities = 8/15 (53%), Positives = 9/15 (60%)
Query: 653 GILMREMMTDPLLRK 667
GI+M E DP L K
Sbjct: 479 GIIMSEFPLDPQLSK 493
>RGD|1311740 [details] [associations]
symbol:Dhx32 "DEAH (Asp-Glu-Ala-His) box polypeptide 32"
species:10116 "Rattus norvegicus" [GO:0004386 "helicase activity"
evidence=IEA] InterPro:IPR007502 Pfam:PF04408 SMART:SM00847
RGD:1311740 GO:GO:0004386 InterPro:IPR011709 Pfam:PF07717
GeneTree:ENSGT00650000093246 CTD:55760 OMA:LACEQDI
OrthoDB:EOG4N30NF EMBL:CH473953 IPI:IPI00366073
RefSeq:NP_001123511.1 UniGene:Rn.162500 Ensembl:ENSRNOT00000024655
GeneID:361667 KEGG:rno:361667 UCSC:RGD:1311740 NextBio:677165
Uniprot:D3ZGJ0
Length = 751
Score = 226 (84.6 bits), Expect = 1.2e-23, Sum P(2) = 1.2e-23
Identities = 47/112 (41%), Positives = 73/112 (65%)
Query: 604 TEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTKIKYMTEGILMREMMTDP 663
T+ + + LA RV++E+ +GH VGY I F++C T + T ++Y T+ +L REMM++P
Sbjct: 123 TQVHKQTAVQLALRVADEMDVNIGHEVGYVIPFENCCTTE-TILRYCTDDMLQREMMSNP 181
Query: 664 LLRKYSVIMLDEVHERTIFTDILMGLLKKIL---KDKERDFECSDEIASILS 712
L Y VI+LD+VHER++ TD+L+GLLK +L + + CS + S LS
Sbjct: 182 FLGSYGVIILDDVHERSLATDVLLGLLKDVLLARPELKLIINCSPFLISRLS 233
Score = 168 (64.2 bits), Expect = 1.8e-16, Sum P(3) = 1.8e-16
Identities = 54/188 (28%), Positives = 93/188 (49%)
Query: 346 LKRTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYYSNDPVVNYVQGV 405
L R +LKLII+ + + +Y N +L V+ +PV V Y + + + V
Sbjct: 213 LARPELKLIINCSPFLISRLSSYYG-----NVPLLEVRNK-HPVEVVYLSGAQKDPFESV 266
Query: 406 VDTAIKIHESMPVGDILAFVIGLEQIEHIIGILKQY-HNQREDL-KLLILPMHGSLPNNE 463
V +IH S GD++ F+ + IE I+ Q N D+ +L+++P++ P E
Sbjct: 267 VRLIFEIHRSGEQGDVVVFLACEQDIEKTYEIVCQEGSNLNPDVGELVVIPLY---PK-E 322
Query: 464 QIKVFRPTPR-------AMRKIVIATNIAETSITIPGIVYVIDPGFVKARWFNPNTLTNS 516
+ +FRP + R++V+ T+ E+ I + +VID G + + +NP NS
Sbjct: 323 KCSLFRPVDETEKRCQASQRRVVLTTSCGESLIWSHTVRFVIDVGLERRQVYNPRIRANS 382
Query: 517 LVVVPISK 524
LV+ PIS+
Sbjct: 383 LVLQPISQ 390
Score = 137 (53.3 bits), Expect = 5.3e-14, Sum P(2) = 5.3e-14
Identities = 40/102 (39%), Positives = 57/102 (55%)
Query: 41 SRKFSRLYTEASFSQ-LNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLR 99
S K LYTE S+ + P EMQ L+S VL +K + I + R F + P ++L
Sbjct: 405 SGKLFCLYTEEFASKDMRPLKPAEMQEANLTSMVLFMKRVDIAGLGRCDFMNRPAPESLM 464
Query: 100 VALELLYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLLSS 141
ALE L L A+D +GNL++ G M+E PL P +K +L+S
Sbjct: 465 QALEDLDYLAALDNDGNLSE-FGIIMSEFPLDPQLSKSILAS 505
Score = 133 (51.9 bits), Expect = 1.2e-23, Sum P(2) = 1.2e-23
Identities = 46/177 (25%), Positives = 81/177 (45%)
Query: 689 LLKKILKDKERDFECSDEIASILSLLQVQDIFIKPSSGALSLKARVLRRNFEVEQGDLLT 748
L K IL E F+C DE+ +I +++ F+ GA A + F +GD T
Sbjct: 498 LSKSILASCE--FDCVDEMLTIAAMVTAPSCFLHVPHGAEEA-AVTCWKTFLHPEGDHFT 554
Query: 749 LLNIFKFYE----KQENK---KQFCHKYFFNYKVLKRAAELKNQMILLLKKSSIPLVT-- 799
L+NI+ Y+ N+ + +CH F + L+ A ++ +++ ++K+ +P
Sbjct: 555 LINIYNAYQDTVLNSANEHCVETWCHNCFLSCSALRMADVIRAELLEIIKRIELPYAEPA 614
Query: 800 --SPRNTNAVLKCLTNGFFSNAAY-LHYSGVYRTVRGNEDLYIHP-SSVLYTLQQPQ 852
S N + K L +G+F A + SG Y + + +HP SS T + P+
Sbjct: 615 FGSQENGLNIKKALLSGYFMQIARDVDGSGNYLMLTHKQVAQLHPLSSYAITKKMPE 671
Score = 77 (32.2 bits), Expect = 4.6e-07, Sum P(3) = 4.6e-07
Identities = 24/82 (29%), Positives = 39/82 (47%)
Query: 2 TEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILMECSRKFSRLYTEASFSQLNECTP 61
T+ +L +P + Y VI+LD VHER++ TD+L+ + L + C+P
Sbjct: 169 TDDMLQREMMSNPFLGSYGVIILDDVHERSLATDVLLGLLKDV--LLARPELKLIINCSP 226
Query: 62 PEMQRTELSSAVLQLKALGIHN 83
+ R LSS + L + N
Sbjct: 227 FLISR--LSSYYGNVPLLEVRN 246
Score = 37 (18.1 bits), Expect = 1.8e-16, Sum P(3) = 1.8e-16
Identities = 8/15 (53%), Positives = 9/15 (60%)
Query: 653 GILMREMMTDPLLRK 667
GI+M E DP L K
Sbjct: 486 GIIMSEFPLDPQLSK 500
>UNIPROTKB|Q8EEY1 [details] [associations]
symbol:hrpA "ATP-dependent helicase HrpA" species:211586
"Shewanella oneidensis MR-1" [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR010222 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000247272 KO:K03578
OMA:TYQFEPG InterPro:IPR024590 Pfam:PF11898 TIGRFAMs:TIGR01967
RefSeq:NP_717826.1 ProteinModelPortal:Q8EEY1 GeneID:1169965
KEGG:son:SO_2229 PATRIC:23524089 ProtClustDB:CLSK906644
Uniprot:Q8EEY1
Length = 1293
Score = 248 (92.4 bits), Expect = 1.5e-23, Sum P(3) = 1.5e-23
Identities = 68/183 (37%), Positives = 100/183 (54%)
Query: 347 KRTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYY-----SNDPVVNY 401
KR LK+II+SAT+D E + +N NA I+ V G YPV Y + ++
Sbjct: 218 KRPDLKIIITSATIDVERFSKHFN-----NAPIIEVSGRTYPVETRYRPLVQDTEADLDQ 272
Query: 402 VQGVVDTAIKIHESMPVGDILAFVIGLEQIEHIIGILKQYHNQREDLKLLILPMHGSLPN 461
++G+ A+ + +GDIL F+ G +I L + N R D + ILP++ L
Sbjct: 273 IEGIF-AAVDELVAEGLGDILIFMNGEREIRDTAEQLNR-RNYR-DTE--ILPLYARLSY 327
Query: 462 NEQIKVFRPTPRAMRKIVIATNIAETSITIPGIVYVIDPGFVKARWFNPNTLTNSLVVVP 521
EQ KVF + R+IV+ATN+AETS+T+PGI YVIDPG + ++ T L + P
Sbjct: 328 GEQSKVF--SSHTGRRIVLATNVAETSLTVPGIRYVIDPGTARISRYSYRTKVQRLPIEP 385
Query: 522 ISK 524
IS+
Sbjct: 386 ISQ 388
Score = 227 (85.0 bits), Expect = 1.8e-18, Sum P(2) = 1.8e-18
Identities = 44/97 (45%), Positives = 69/97 (71%)
Query: 601 IGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTKIKYMTEGILMREMM 660
IG T+PRR++ S+A+RV+EEL++ LG VG+ +RF D + + IK MT+GIL+ E+
Sbjct: 124 IGHTQPRRLAARSVASRVAEELQSPLGEVVGFKVRFADALKSE-SYIKLMTDGILLAELT 182
Query: 661 TDPLLRKYSVIMLDEVHERTIFTDILMGLLKKILKDK 697
+D L +Y I++DE HER++ D ++G LK+ILK +
Sbjct: 183 SDRYLDQYDTIIIDEAHERSLNIDFILGYLKQILKKR 219
Score = 155 (59.6 bits), Expect = 1.4e-13, Sum P(3) = 1.4e-13
Identities = 35/98 (35%), Positives = 58/98 (59%)
Query: 46 RLYTEASFSQLNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRVALELL 105
RLY EA F+ T PE+ RT L+S +LQ+ A+G+ +I F F PP +++R LL
Sbjct: 408 RLYDEADFNNRPAFTDPEILRTNLASVILQMLAIGLGDIAAFPFIEPPDPRHIRDGFLLL 467
Query: 106 YSLGAM-DVNGNLT-KPVGETMAEMPLHPIHAKVLLSS 141
L A+ GN+ P+G ++++P+ P A++++ S
Sbjct: 468 EELQAVKQQKGNIVLTPLGRQLSQIPVDPRLARMVIES 505
Score = 89 (36.4 bits), Expect = 1.5e-23, Sum P(3) = 1.5e-23
Identities = 33/149 (22%), Positives = 65/149 (43%)
Query: 703 CSDEIASILSLLQVQDIFIKPSSGALSLKARVLRRNFEVEQGDLLTLLNIFKFYEKQENK 762
C +E+ I S L +QD +P + + R F Q D ++ +N+++ ++Q+ +
Sbjct: 510 CLNEVLVIASGLSIQDPRERPMDKKQA--SDEAHRRFADPQSDFVSWVNLWQHLKEQQKE 567
Query: 763 ---KQF---CHKYFFNYKVLKRAAELKNQMILLLKKSSIPLVTSPRNTNAVLKCLTNGFF 816
QF C + Y ++ +L Q+ + L +P N +A+ + L +G
Sbjct: 568 LSASQFRKKCRDEYLAYLRVREWQDLYTQLKQAVHDLKWRLNDTPANYDALHRALLSGLL 627
Query: 817 SNAAYLHYSGVYRTVRGNEDLYIHPSSVL 845
S+ + + Y R N ++ P S L
Sbjct: 628 SHIGFKDNNNEYLGAR-NRKFFVFPGSPL 655
Score = 75 (31.5 bits), Expect = 1.5e-23, Sum P(3) = 1.5e-23
Identities = 13/38 (34%), Positives = 25/38 (65%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILM 38
MT+GIL+ D +++Y I++D+ HER++ D ++
Sbjct: 172 MTDGILLAELTSDRYLDQYDTIIIDEAHERSLNIDFIL 209
Score = 46 (21.3 bits), Expect = 3.9e-19, Sum P(3) = 3.9e-19
Identities = 28/141 (19%), Positives = 63/141 (44%)
Query: 644 VTKIKYMTEGILMREMMTDPLLRKYSVIMLDEVHERTIF--TDILMGL-LKKILKDKERD 700
+ ++ + G+ +++ P+ +K + DE H R +D + + L + LK+++++
Sbjct: 511 LNEVLVIASGLSIQDPRERPMDKKQAS---DEAHRRFADPQSDFVSWVNLWQHLKEQQKE 567
Query: 701 F-------ECSDEIASILSLLQVQDIFIKPSSGALSLKARV--LRRNFEVEQGDLLT-LL 750
+C DE + L + + QD++ + LK R+ N++ LL+ LL
Sbjct: 568 LSASQFRKKCRDEYLAYLRVREWQDLYTQLKQAVHDLKWRLNDTPANYDALHRALLSGLL 627
Query: 751 NIFKFYEKQENKKQFCHKYFF 771
+ F + ++ FF
Sbjct: 628 SHIGFKDNNNEYLGARNRKFF 648
Score = 40 (19.1 bits), Expect = 1.6e-18, Sum P(3) = 1.6e-18
Identities = 9/37 (24%), Positives = 21/37 (56%)
Query: 715 QVQDIFIKPSSGALSLKARVLRRNFEVEQGDLLTLLN 751
+++ +++P + L +K L +FE +QG ++ N
Sbjct: 681 KIEPEWLEPLAAHL-IKKNHLEPHFEAKQGSVIAFEN 716
>TIGR_CMR|SO_2229 [details] [associations]
symbol:SO_2229 "ATP-dependent helicase HrpA" species:211586
"Shewanella oneidensis MR-1" [GO:0008150 "biological_process"
evidence=ND] [GO:0008026 "ATP-dependent helicase activity"
evidence=ISS] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR010222 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000247272 KO:K03578
OMA:TYQFEPG InterPro:IPR024590 Pfam:PF11898 TIGRFAMs:TIGR01967
RefSeq:NP_717826.1 ProteinModelPortal:Q8EEY1 GeneID:1169965
KEGG:son:SO_2229 PATRIC:23524089 ProtClustDB:CLSK906644
Uniprot:Q8EEY1
Length = 1293
Score = 248 (92.4 bits), Expect = 1.5e-23, Sum P(3) = 1.5e-23
Identities = 68/183 (37%), Positives = 100/183 (54%)
Query: 347 KRTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYY-----SNDPVVNY 401
KR LK+II+SAT+D E + +N NA I+ V G YPV Y + ++
Sbjct: 218 KRPDLKIIITSATIDVERFSKHFN-----NAPIIEVSGRTYPVETRYRPLVQDTEADLDQ 272
Query: 402 VQGVVDTAIKIHESMPVGDILAFVIGLEQIEHIIGILKQYHNQREDLKLLILPMHGSLPN 461
++G+ A+ + +GDIL F+ G +I L + N R D + ILP++ L
Sbjct: 273 IEGIF-AAVDELVAEGLGDILIFMNGEREIRDTAEQLNR-RNYR-DTE--ILPLYARLSY 327
Query: 462 NEQIKVFRPTPRAMRKIVIATNIAETSITIPGIVYVIDPGFVKARWFNPNTLTNSLVVVP 521
EQ KVF + R+IV+ATN+AETS+T+PGI YVIDPG + ++ T L + P
Sbjct: 328 GEQSKVF--SSHTGRRIVLATNVAETSLTVPGIRYVIDPGTARISRYSYRTKVQRLPIEP 385
Query: 522 ISK 524
IS+
Sbjct: 386 ISQ 388
Score = 227 (85.0 bits), Expect = 1.8e-18, Sum P(2) = 1.8e-18
Identities = 44/97 (45%), Positives = 69/97 (71%)
Query: 601 IGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTKIKYMTEGILMREMM 660
IG T+PRR++ S+A+RV+EEL++ LG VG+ +RF D + + IK MT+GIL+ E+
Sbjct: 124 IGHTQPRRLAARSVASRVAEELQSPLGEVVGFKVRFADALKSE-SYIKLMTDGILLAELT 182
Query: 661 TDPLLRKYSVIMLDEVHERTIFTDILMGLLKKILKDK 697
+D L +Y I++DE HER++ D ++G LK+ILK +
Sbjct: 183 SDRYLDQYDTIIIDEAHERSLNIDFILGYLKQILKKR 219
Score = 155 (59.6 bits), Expect = 1.4e-13, Sum P(3) = 1.4e-13
Identities = 35/98 (35%), Positives = 58/98 (59%)
Query: 46 RLYTEASFSQLNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRVALELL 105
RLY EA F+ T PE+ RT L+S +LQ+ A+G+ +I F F PP +++R LL
Sbjct: 408 RLYDEADFNNRPAFTDPEILRTNLASVILQMLAIGLGDIAAFPFIEPPDPRHIRDGFLLL 467
Query: 106 YSLGAM-DVNGNLT-KPVGETMAEMPLHPIHAKVLLSS 141
L A+ GN+ P+G ++++P+ P A++++ S
Sbjct: 468 EELQAVKQQKGNIVLTPLGRQLSQIPVDPRLARMVIES 505
Score = 89 (36.4 bits), Expect = 1.5e-23, Sum P(3) = 1.5e-23
Identities = 33/149 (22%), Positives = 65/149 (43%)
Query: 703 CSDEIASILSLLQVQDIFIKPSSGALSLKARVLRRNFEVEQGDLLTLLNIFKFYEKQENK 762
C +E+ I S L +QD +P + + R F Q D ++ +N+++ ++Q+ +
Sbjct: 510 CLNEVLVIASGLSIQDPRERPMDKKQA--SDEAHRRFADPQSDFVSWVNLWQHLKEQQKE 567
Query: 763 ---KQF---CHKYFFNYKVLKRAAELKNQMILLLKKSSIPLVTSPRNTNAVLKCLTNGFF 816
QF C + Y ++ +L Q+ + L +P N +A+ + L +G
Sbjct: 568 LSASQFRKKCRDEYLAYLRVREWQDLYTQLKQAVHDLKWRLNDTPANYDALHRALLSGLL 627
Query: 817 SNAAYLHYSGVYRTVRGNEDLYIHPSSVL 845
S+ + + Y R N ++ P S L
Sbjct: 628 SHIGFKDNNNEYLGAR-NRKFFVFPGSPL 655
Score = 75 (31.5 bits), Expect = 1.5e-23, Sum P(3) = 1.5e-23
Identities = 13/38 (34%), Positives = 25/38 (65%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILM 38
MT+GIL+ D +++Y I++D+ HER++ D ++
Sbjct: 172 MTDGILLAELTSDRYLDQYDTIIIDEAHERSLNIDFIL 209
Score = 46 (21.3 bits), Expect = 3.9e-19, Sum P(3) = 3.9e-19
Identities = 28/141 (19%), Positives = 63/141 (44%)
Query: 644 VTKIKYMTEGILMREMMTDPLLRKYSVIMLDEVHERTIF--TDILMGL-LKKILKDKERD 700
+ ++ + G+ +++ P+ +K + DE H R +D + + L + LK+++++
Sbjct: 511 LNEVLVIASGLSIQDPRERPMDKKQAS---DEAHRRFADPQSDFVSWVNLWQHLKEQQKE 567
Query: 701 F-------ECSDEIASILSLLQVQDIFIKPSSGALSLKARV--LRRNFEVEQGDLLT-LL 750
+C DE + L + + QD++ + LK R+ N++ LL+ LL
Sbjct: 568 LSASQFRKKCRDEYLAYLRVREWQDLYTQLKQAVHDLKWRLNDTPANYDALHRALLSGLL 627
Query: 751 NIFKFYEKQENKKQFCHKYFF 771
+ F + ++ FF
Sbjct: 628 SHIGFKDNNNEYLGARNRKFF 648
Score = 40 (19.1 bits), Expect = 1.6e-18, Sum P(3) = 1.6e-18
Identities = 9/37 (24%), Positives = 21/37 (56%)
Query: 715 QVQDIFIKPSSGALSLKARVLRRNFEVEQGDLLTLLN 751
+++ +++P + L +K L +FE +QG ++ N
Sbjct: 681 KIEPEWLEPLAAHL-IKKNHLEPHFEAKQGSVIAFEN 716
>ZFIN|ZDB-GENE-030131-4505 [details] [associations]
symbol:dhx37 "DEAH (Asp-Glu-Ala-His) box
polypeptide 37" species:7955 "Danio rerio" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
ZFIN:ZDB-GENE-030131-4505 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GeneTree:ENSGT00550000074985 KO:K14780
CTD:57647 HOVERGEN:HBG051356 OMA:AKLQPRT EMBL:CABZ01014508
EMBL:CABZ01038687 EMBL:CABZ01038688 EMBL:CABZ01038689
EMBL:CABZ01038690 EMBL:CABZ01038691 EMBL:CABZ01038692
EMBL:CABZ01038693 EMBL:CABZ01038694 EMBL:CABZ01038695
EMBL:CABZ01038696 EMBL:CU469504 EMBL:FP085395 IPI:IPI00488738
RefSeq:NP_001076473.2 UniGene:Dr.79711 Ensembl:ENSDART00000090731
Ensembl:ENSDART00000127153 GeneID:100009635 KEGG:dre:100009635
NextBio:20787816 Uniprot:B8JLP0
Length = 1152
Score = 275 (101.9 bits), Expect = 1.7e-19, Sum P(3) = 1.7e-19
Identities = 55/114 (48%), Positives = 86/114 (75%)
Query: 587 QYLLEAGWCYDTKLIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTK 646
Q+L EAG+ +IG+TEPRR++ S+++RV+ E+ + G V Y IR++ TE+ TK
Sbjct: 287 QFLYEAGFASSGGIIGVTEPRRVAAISMSHRVATEMNLSSG-VVSYQIRYEGNVTEN-TK 344
Query: 647 IKYMTEGILMREMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKI--LKDKE 698
IK MT+G+L++E+ D LL+KYSVI++DE HER+++TDIL+GLL +I L++K+
Sbjct: 345 IKVMTDGVLLKEIQRDFLLQKYSVIIIDEAHERSVYTDILIGLLSRIVPLRNKK 398
Score = 189 (71.6 bits), Expect = 4.9e-23, Sum P(5) = 4.9e-23
Identities = 42/105 (40%), Positives = 58/105 (55%)
Query: 442 HNQRED--LKLLILPMHGSLPNNEQIKVFRPTPRAMRKIVIATNIAETSITIPGIVYVID 499
H ++ D + L +LP++ L +Q KVFRP P R V+ATN+AETS+TIPGI YV+D
Sbjct: 570 HEEKADPSIPLYVLPLYSLLAPEQQAKVFRPPPAGSRLCVVATNVAETSLTIPGIKYVVD 629
Query: 500 PGFVKARWFNPNTLTNSLVVVPISKXXXXXXXXXXXXXXXXHVYR 544
G VK R+++ T +S V IS+ H YR
Sbjct: 630 CGRVKKRFYDRVTGVSSFKVTWISQASANQRAGRAGRTEPGHCYR 674
Score = 144 (55.7 bits), Expect = 6.2e-12, Sum P(4) = 6.2e-12
Identities = 38/107 (35%), Positives = 58/107 (54%)
Query: 46 RLYTEASFSQLNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRVALELL 105
RLY+ A F + + E+ R + VLQ+K L I ++ F FP+PP ++ L A ELL
Sbjct: 674 RLYSSAVFGDFSLFSEAEITRRPVEDLVLQMKDLNIEKVVNFPFPTPPSSEALIAAEELL 733
Query: 106 YSLGAMDV---NGNLTK-----------PVGETMAEMPLHPIHAKVL 138
SLGA++ +G L++ P+G MA P+ P +AK+L
Sbjct: 734 ISLGALEKPARHGRLSEMEKARLSCPISPLGRAMAAFPVAPRYAKML 780
Score = 107 (42.7 bits), Expect = 4.9e-23, Sum P(5) = 4.9e-23
Identities = 18/38 (47%), Positives = 31/38 (81%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILM 38
MT+G+L++ D ++KYSVI++D+ HER+++TDIL+
Sbjct: 348 MTDGVLLKEIQRDFLLQKYSVIIIDEAHERSVYTDILI 385
Score = 104 (41.7 bits), Expect = 4.9e-23, Sum P(5) = 4.9e-23
Identities = 30/113 (26%), Positives = 55/113 (48%)
Query: 343 LKPLKRTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYYSN-DPVVNY 401
L+ K +KLII SAT+ E+ + + SS ++ V+ + V+V+++ P+ +Y
Sbjct: 394 LRNKKGLPMKLIIMSATLRVEDFTENKRLF-SSPPPVIKVEARQFAVTVHFNKRTPMDDY 452
Query: 402 VQGVVDTAIKIHESMPVGDILAFVIGLEQIEHIIGILKQ---YHNQREDLKLL 451
KIH +P G IL F+ G ++ + L++ Y RE ++
Sbjct: 453 TGETFRKICKIHRMLPPGGILVFLTGQAEVHSVCRRLRKAFPYKPNREHTDMM 505
Score = 47 (21.6 bits), Expect = 4.9e-23, Sum P(5) = 4.9e-23
Identities = 10/28 (35%), Positives = 18/28 (64%)
Query: 824 YSGVYRTVRGNEDLYIHPSSVLY-TLQQ 850
+ Y+T ++ ++IHPSS L+ TL +
Sbjct: 943 WRNAYKTPLLDDPVFIHPSSALHKTLPE 970
Score = 47 (21.6 bits), Expect = 4.9e-23, Sum P(5) = 4.9e-23
Identities = 12/43 (27%), Positives = 18/43 (41%)
Query: 744 GDLLTLLNIFKFYEKQENKKQFCHKYFFNYKVLKRAAELKNQM 786
GDL+ LL E QFC + +K + L+ Q+
Sbjct: 845 GDLMVLLGAVGACEFAGLTPQFCEENGLRFKAMLEIRRLRGQL 887
>TIGR_CMR|CPS_2243 [details] [associations]
symbol:CPS_2243 "ATP-dependent helicase HrpA"
species:167879 "Colwellia psychrerythraea 34H" [GO:0004386
"helicase activity" evidence=ISS] [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
InterPro:IPR001650 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR010222 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 EMBL:CP000083
GenomeReviews:CP000083_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000247272 KO:K03578 OMA:TYQFEPG
InterPro:IPR024590 Pfam:PF11898 TIGRFAMs:TIGR01967
RefSeq:YP_268968.1 ProteinModelPortal:Q482P9 STRING:Q482P9
GeneID:3518699 KEGG:cps:CPS_2243 PATRIC:21467591
BioCyc:CPSY167879:GI48-2313-MONOMER Uniprot:Q482P9
Length = 1375
Score = 251 (93.4 bits), Expect = 6.2e-22, Sum P(2) = 6.2e-22
Identities = 54/105 (51%), Positives = 73/105 (69%)
Query: 590 LEAGWCYDTKLIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTKIKY 649
LE G D LIG T+PRRI+ ++ANR++EEL T LG VGY +RF+D +E + IK
Sbjct: 137 LELGRGVDG-LIGHTQPRRIAARTVANRIAEELGTKLGEQVGYKVRFNDQVSEQ-SYIKL 194
Query: 650 MTEGILMREMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKIL 694
MT+GIL+ EM D LL KY I++DE HER++ D ++G LK+IL
Sbjct: 195 MTDGILLAEMQRDRLLLKYDTIIIDEAHERSLNIDFILGYLKQIL 239
Score = 233 (87.1 bits), Expect = 5.8e-23, Sum P(3) = 5.8e-23
Identities = 61/192 (31%), Positives = 102/192 (53%)
Query: 346 LKRTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYYS--NDPVV---- 399
+KR LKLII+SAT+D + + ++ A I+ V G +PV + Y ND V
Sbjct: 240 IKRPDLKLIITSATIDPQRFAKHFSSKNGLPAPIIEVSGRTFPVEMRYRPLNDRAVIDDD 299
Query: 400 -------NYVQGVVDTAIKIHESMPVGDILAFVIGLEQIEHIIGILKQYHNQREDLKLLI 452
+ + G++ ++ + GDIL F+ G +I L + + + + +
Sbjct: 300 DQSPQEVDIISGILSAVDELSDCGN-GDILVFLNGEREIRDTAAALVKANLRHTN----V 354
Query: 453 LPMHGSLPNNEQIKVFRPTPRAMRKIVIATNIAETSITIPGIVYVIDPGFVKARWFNPNT 512
LP++ L +EQ ++F+P + R IV+ATN+AETS+T+PGI YVIDPG + ++ T
Sbjct: 355 LPLYARLTVSEQNQIFKP--HSGRNIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRT 412
Query: 513 LTNSLVVVPISK 524
L + P+S+
Sbjct: 413 KVQRLPIEPVSQ 424
Score = 119 (46.9 bits), Expect = 8.1e-11, Sum P(3) = 8.1e-11
Identities = 36/111 (32%), Positives = 56/111 (50%)
Query: 46 RLYTEASFSQLNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRVALELL 105
RLY+E + E T PE+ RT L++ +LQ+ AL + +I F F P +N+ + LL
Sbjct: 444 RLYSEDDYKSRAEFTDPEILRTNLATVILQMHALDLGDIANFPFVEAPDNRNITDGVRLL 503
Query: 106 YSLGAM------DVNGN---------LTKPVGETMAEMPLHPIHAKVLLSS 141
+ A+ D N LTK G +A+ P+ P AK+++SS
Sbjct: 504 EEIAAVESIENADKNAKGKASSTATQLTKS-GRLLAKFPIDPRLAKMVVSS 553
Score = 98 (39.6 bits), Expect = 5.8e-23, Sum P(3) = 5.8e-23
Identities = 29/106 (27%), Positives = 55/106 (51%)
Query: 700 DFECSDEIASILSLLQVQDIFIKPSSGALSLKARVLRRNFEVEQGDLLTLLNIFKFYEKQ 759
+F C ++I I+S L +QD +P L R F+ + D ++LLN++++ +Q
Sbjct: 555 EFGCIEQILIIVSALSIQDPRERPHEKQ-QLSDEKHNR-FKDKSSDFISLLNLWQYINEQ 612
Query: 760 EN---KKQF---CHKYFFNYKVLKRAAELKNQMILLLKKSSIPLVT 799
+ + QF C + F +Y L+ ++ +Q+ L LK+ I L +
Sbjct: 613 KKDLTQNQFRKLCQREFLSYVRLREWQDIFSQLKLTLKEQQITLTS 658
Score = 77 (32.2 bits), Expect = 5.8e-23, Sum P(3) = 5.8e-23
Identities = 14/38 (36%), Positives = 24/38 (63%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILM 38
MT+GIL+ D + KY I++D+ HER++ D ++
Sbjct: 195 MTDGILLAEMQRDRLLLKYDTIIIDEAHERSLNIDFIL 232
Score = 38 (18.4 bits), Expect = 8.1e-05, Sum P(3) = 8.1e-05
Identities = 17/66 (25%), Positives = 30/66 (45%)
Query: 386 LYPVSVYYSNDPVVNYVQGVVDTAIKIHESMPVGDILA---FVIGLEQIEHIIGILKQYH 442
LY +S+ N ++ V I I E++ GD + F+ +Q+ I L+Q
Sbjct: 794 LYGLSIVSKRKINFNVIEPVTCREIFIREALVNGDCVIKEKFLSKNQQLVESIEELEQKA 853
Query: 443 NQREDL 448
+R+ L
Sbjct: 854 RRRDFL 859
Score = 37 (18.1 bits), Expect = 1.1e-16, Sum P(3) = 1.1e-16
Identities = 11/30 (36%), Positives = 14/30 (46%)
Query: 691 KKILKDKERDFECSDEIASILSLLQVQDIF 720
KK L + C E S + L + QDIF
Sbjct: 613 KKDLTQNQFRKLCQREFLSYVRLREWQDIF 642
>MGI|MGI:2141813 [details] [associations]
symbol:Dhx32 "DEAH (Asp-Glu-Ala-His) box polypeptide 32"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR007502 Pfam:PF04408 PROSITE:PS51194 SMART:SM00847
MGI:MGI:2141813 GO:GO:0005739 GO:GO:0005524 GO:GO:0005634
GO:GO:0004386 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 HOGENOM:HOG000175261 GeneTree:ENSGT00650000093246
HOVERGEN:HBG039428 CTD:55760 OMA:LACEQDI OrthoDB:EOG4N30NF
ChiTaRS:DHX32 EMBL:AY065980 EMBL:AK033624 EMBL:AK169005
EMBL:AK172504 EMBL:BC006911 EMBL:BC022920 IPI:IPI00127679
IPI:IPI00830523 RefSeq:NP_598702.1 UniGene:Mm.199223
ProteinModelPortal:Q8BZS9 SMR:Q8BZS9 PaxDb:Q8BZS9 PRIDE:Q8BZS9
Ensembl:ENSMUST00000033290 Ensembl:ENSMUST00000063669 GeneID:101437
KEGG:mmu:101437 UCSC:uc009kdj.1 InParanoid:Q8BZS9 NextBio:354922
Bgee:Q8BZS9 CleanEx:MM_DHX32 Genevestigator:Q8BZS9 Uniprot:Q8BZS9
Length = 744
Score = 227 (85.0 bits), Expect = 7.8e-23, Sum P(3) = 7.8e-23
Identities = 47/112 (41%), Positives = 73/112 (65%)
Query: 604 TEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTKIKYMTEGILMREMMTDP 663
T+ + + LA RV++E+ +GH VGY I F++C T + T ++Y T+ +L REMM++P
Sbjct: 116 TQAHKQTAVQLALRVADEMDVNIGHEVGYVIPFENCCTTE-TILRYCTDDMLQREMMSNP 174
Query: 664 LLRKYSVIMLDEVHERTIFTDILMGLLKKIL---KDKERDFECSDEIASILS 712
L Y VI+LD+VHER++ TD+L+GLLK +L + + CS + S LS
Sbjct: 175 FLGSYGVIILDDVHERSLATDVLLGLLKDVLLARPELKLIVNCSPLLTSKLS 226
Score = 161 (61.7 bits), Expect = 3.6e-15, Sum P(4) = 3.6e-15
Identities = 49/188 (26%), Positives = 93/188 (49%)
Query: 346 LKRTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYYSNDPVVNYVQGV 405
L R +LKLI++ + + ++ +Y + ++ V+ +PV V Y + + + V
Sbjct: 206 LARPELKLIVNCSPLLTSKLSSYYG-----DVPVIEVRNK-HPVEVVYLSGAQKDSFESV 259
Query: 406 VDTAIKIHESMPVGDILAFVIGLEQIEHIIGILKQY-HNQREDL-KLLILPMHGSLPNNE 463
+ +IH S GD++ F+ + IE ++ Q N D+ L+++P++ P E
Sbjct: 260 IRLIFEIHRSGEKGDVVVFLACEQDIEKTYELVCQEGSNLNPDVGDLVVIPLY---PK-E 315
Query: 464 QIKVFRPTPRA-------MRKIVIATNIAETSITIPGIVYVIDPGFVKARWFNPNTLTNS 516
+ +FRP R++V+ T+ E+ I + +VID G + + +NP NS
Sbjct: 316 KCSLFRPVDETEKRCQVYQRRVVLTTSCGESLIWSHTVKFVIDVGLERRQVYNPRIRANS 375
Query: 517 LVVVPISK 524
LV+ PIS+
Sbjct: 376 LVLQPISQ 383
Score = 137 (53.3 bits), Expect = 8.4e-14, Sum P(2) = 8.4e-14
Identities = 40/102 (39%), Positives = 57/102 (55%)
Query: 41 SRKFSRLYTEASFSQ-LNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLR 99
S K LYTE S+ + P EMQ L+S VL +K + I + R F + P ++L
Sbjct: 398 SGKLFCLYTEEFASKDMRPLKPAEMQEANLTSMVLFMKRVDIAGLGRCDFMNRPAPESLM 457
Query: 100 VALELLYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLLSS 141
ALE L L A+D +GNL++ G M+E PL P +K +L+S
Sbjct: 458 QALEDLDYLAALDNDGNLSE-FGIIMSEFPLDPQLSKSILAS 498
Score = 131 (51.2 bits), Expect = 7.8e-23, Sum P(3) = 7.8e-23
Identities = 45/177 (25%), Positives = 81/177 (45%)
Query: 689 LLKKILKDKERDFECSDEIASILSLLQVQDIFIKPSSGALSLKARVLRRNFEVEQGDLLT 748
L K IL E F+C DE+ +I +++ F+ GA A + F +GD T
Sbjct: 491 LSKSILASCE--FDCVDEMLTIAAMVTAPSCFLHVPHGAEEA-AVTCWKTFLHPEGDHFT 547
Query: 749 LLNIFKFYE----KQENK---KQFCHKYFFNYKVLKRAAELKNQMILLLKKSSIPLVT-- 799
L+N++ Y+ N+ + +CH F + L+ A ++ +++ ++K+ +P
Sbjct: 548 LINVYNAYQDTVLNSANEHCVEMWCHDCFLSCSALRMADVIRAELLEIIKRIELPYAEPA 607
Query: 800 --SPRNTNAVLKCLTNGFFSNAAY-LHYSGVYRTVRGNEDLYIHP-SSVLYTLQQPQ 852
S N + K L +G+F A + SG Y + + +HP SS T + P+
Sbjct: 608 FGSKENGLNIKKALLSGYFMQIARDVDGSGNYLMLTHKQVAQLHPLSSYSITKKMPE 664
Score = 78 (32.5 bits), Expect = 5.7e-07, Sum P(3) = 5.7e-07
Identities = 22/82 (26%), Positives = 40/82 (48%)
Query: 2 TEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILMECSRKFSRLYTEASFSQLNECTP 61
T+ +L +P + Y VI+LD VHER++ TD+L+ + L + C+P
Sbjct: 162 TDDMLQREMMSNPFLGSYGVIILDDVHERSLATDVLLGLLKDV--LLARPELKLIVNCSP 219
Query: 62 PEMQRTELSSAVLQLKALGIHN 83
+ ++LSS + + + N
Sbjct: 220 --LLTSKLSSYYGDVPVIEVRN 239
Score = 38 (18.4 bits), Expect = 7.8e-23, Sum P(3) = 7.8e-23
Identities = 12/46 (26%), Positives = 19/46 (41%)
Query: 161 DNVDSGPETFHDHEMCFSIRGNQTQPLLLRVRRALDFPDMPYQLRY 206
D+ ++ PE + E S G++ L F +PY RY
Sbjct: 7 DHPNASPEKRYFPESLDSSDGDEEGVLACEDLELNPFDGLPYSSRY 52
Score = 37 (18.1 bits), Expect = 3.6e-15, Sum P(4) = 3.6e-15
Identities = 8/15 (53%), Positives = 9/15 (60%)
Query: 653 GILMREMMTDPLLRK 667
GI+M E DP L K
Sbjct: 479 GIIMSEFPLDPQLSK 493
>RGD|1306837 [details] [associations]
symbol:Dhx37 "DEAH (Asp-Glu-Ala-His) box polypeptide 37"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
RGD:1306837 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00550000074985 KO:K14780 CTD:57647
OMA:AKLQPRT OrthoDB:EOG4P2Q1J IPI:IPI00391385 RefSeq:NP_001099396.2
UniGene:Rn.24493 Ensembl:ENSRNOT00000030823 GeneID:288647
KEGG:rno:288647 UCSC:RGD:1306837 NextBio:628468 ArrayExpress:D4A1R0
Uniprot:D4A1R0
Length = 1150
Score = 270 (100.1 bits), Expect = 2.1e-19, Sum P(2) = 2.1e-19
Identities = 50/109 (45%), Positives = 82/109 (75%)
Query: 587 QYLLEAGWCYDTKLIGITEPRRISVTSLANRVSEELRTTLGH-TVGYTIRFDDCTTEDVT 645
Q+L EAG+ + +IG+TEPRR++ +++ RV++E+ L H V Y IR++ TE+ T
Sbjct: 283 QFLYEAGYSSEDSIIGVTEPRRVAAVAMSQRVAKEMN--LSHRVVSYQIRYEGNVTEE-T 339
Query: 646 KIKYMTEGILMREMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKIL 694
+IK+MT+G+L++E+ D LL KY V+++DE HER+++TDIL+GLL +I+
Sbjct: 340 RIKFMTDGVLLKEIQKDFLLLKYKVVIIDEAHERSVYTDILLGLLSRIV 388
Score = 176 (67.0 bits), Expect = 2.5e-22, Sum P(5) = 2.5e-22
Identities = 39/97 (40%), Positives = 54/97 (55%)
Query: 448 LKLLILPMHGSLPNNEQIKVFRPTPRAMRKIVIATNIAETSITIPGIVYVIDPGFVKARW 507
L L +LP++ L +Q +VF+P P R VIATN+AETS+TIPGI YV+D G VK R+
Sbjct: 579 LPLHVLPLYSLLAPEKQAQVFKPPPEGTRLCVIATNVAETSLTIPGIKYVVDCGKVKKRY 638
Query: 508 FNPNTLTNSLVVVPISKXXXXXXXXXXXXXXXXHVYR 544
++ T +S V +S+ H YR
Sbjct: 639 YDRVTGVSSFRVTWVSQASADQRAGRAGRTEPGHCYR 675
Score = 156 (60.0 bits), Expect = 1.1e-13, Sum P(4) = 1.1e-13
Identities = 39/110 (35%), Positives = 57/110 (51%)
Query: 46 RLYTEASFSQLNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRVALELL 105
RLY+ A F + PPE+ R + +LQ+KAL I ++ F FP+PP + L A ELL
Sbjct: 675 RLYSSAVFGDFEQFPPPEITRRPVEDLILQMKALNIEKVINFPFPTPPSVEALIAAEELL 734
Query: 106 YSLGAMDVN-----------GNLTKPV---GETMAEMPLHPIHAKVLLSS 141
+LGA+ L+ P+ G TM+ P+ P +AK+L S
Sbjct: 735 IALGALQAPPKQERMKKLQMSQLSCPITALGRTMSTFPVAPRYAKMLALS 784
Score = 106 (42.4 bits), Expect = 2.5e-22, Sum P(5) = 2.5e-22
Identities = 26/99 (26%), Positives = 50/99 (50%)
Query: 343 LKPLKRTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYYSN-DPVVNY 401
L+ + LKL+I SAT+ E+ Q + + ++ V+ +PV+V+++ P+ +Y
Sbjct: 390 LRAKRHLPLKLLIMSATLRVEDFTQNQRLFTTP-PPVIKVESRQFPVTVHFNKRTPLDDY 448
Query: 402 VQGVVDTAIKIHESMPVGDILAFVIGLEQIEHIIGILKQ 440
KIH +P G IL F+ G ++ + L++
Sbjct: 449 SGECFRKVCKIHRMLPAGGILVFLTGQAEVHALCRRLRK 487
Score = 97 (39.2 bits), Expect = 2.5e-22, Sum P(5) = 2.5e-22
Identities = 16/38 (42%), Positives = 29/38 (76%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILM 38
MT+G+L++ D + KY V+++D+ HER+++TDIL+
Sbjct: 344 MTDGVLLKEIQKDFLLLKYKVVIIDEAHERSVYTDILL 381
Score = 57 (25.1 bits), Expect = 2.5e-22, Sum P(5) = 2.5e-22
Identities = 26/135 (19%), Positives = 54/135 (40%)
Query: 655 LMREMMTDPLLRKYS-VIMLDEVHERTIFTDILMGLL--KKILKDKERDFECSDEIASIL 711
L R M T P+ +Y+ ++ L + H +T ++ + +++ ++ +R +E+A +
Sbjct: 764 LGRTMSTFPVAPRYAKMLALSQQHGCLPYTIAIVAAMTVRELFEELDRPAASEEELAELK 823
Query: 712 SLLQVQDIFIKPSSGALSLKARVLRRNFEVEQGDLLTLLNIFKFYEKQENKKQFCHKYFF 771
+ +K + ++ GDL+ LL E QFC
Sbjct: 824 GR----------RTRVAQMKRTWAGQGASLKLGDLMVLLGAVGACEYAGCSPQFCQANGL 873
Query: 772 NYKVLKRAAELKNQM 786
YK + L+ Q+
Sbjct: 874 RYKAMLEIRRLRGQL 888
Score = 52 (23.4 bits), Expect = 2.5e-22, Sum P(5) = 2.5e-22
Identities = 9/23 (39%), Positives = 16/23 (69%)
Query: 824 YSGVYRTVRGNEDLYIHPSSVLY 846
+ Y+T ++ ++IHPSSVL+
Sbjct: 944 WKNAYKTPLLDDPVFIHPSSVLF 966
>UNIPROTKB|E7EWK3 [details] [associations]
symbol:DHX36 "Probable ATP-dependent RNA helicase DHX36"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IEA] [GO:0009615
"response to virus" evidence=IEA] [GO:0043330 "response to
exogenous dsRNA" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0009615 GO:GO:0003725
EMBL:AC018452 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 GO:GO:0043330
EMBL:AC134026 HGNC:HGNC:14410 IPI:IPI00945848
ProteinModelPortal:E7EWK3 SMR:E7EWK3 Ensembl:ENST00000481941
ArrayExpress:E7EWK3 Bgee:E7EWK3 Uniprot:E7EWK3
Length = 797
Score = 205 (77.2 bits), Expect = 2.5e-22, Sum P(4) = 2.5e-22
Identities = 54/156 (34%), Positives = 75/156 (48%)
Query: 419 GDILAFVIGLEQIEHIIGILKQYHNQREDLKLLILPMHGSLPNNEQIKVFRPTPRAMRKI 478
G IL F+ G + I + +L + D K LI+P+H +P Q +VF+ TP +RKI
Sbjct: 403 GAILVFLPGWDNISTLHDLLMSQVMFKSD-KFLIIPLHSLMPTVNQTQVFKRTPPGVRKI 461
Query: 479 VIATNIAETSITIPGIVYVIDPGFVKARWFNPNTLTNSLVVVPISKXXXXXXXXXXXXXX 538
VIATNIAETSITI +VYVID G +K F+ +++ +SK
Sbjct: 462 VIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRKGRAGRVQ 521
Query: 539 XXHVYRKNFMYNRLFIHFCVSRNIPTIPNDPKDVKC 574
H Y +YN L +P I P + C
Sbjct: 522 PGHCYH---LYNGLRASLLDDYQLPEILRTPLEELC 554
Score = 169 (64.5 bits), Expect = 7.1e-12, Sum P(2) = 7.1e-12
Identities = 37/93 (39%), Positives = 56/93 (60%)
Query: 604 TEPRRISVTSLANRVSEELRTTLG--HTVGYTIRFDDCTTEDVTKIKYMTEGILMREMMT 661
T+PRRIS S+A RV+ E + G ++ GY IR I Y T GI+++ + +
Sbjct: 176 TQPRRISAISVAERVAAERAESCGSGNSTGYQIRLQSRLPRKQGSILYCTTGIILQWLQS 235
Query: 662 DPLLRKYSVIMLDEVHERTIFTDILMGLLKKIL 694
DP L S I+LDE+HER + +D+LM ++K +L
Sbjct: 236 DPYLSSVSHIVLDEIHERNLQSDVLMTVVKDLL 268
Score = 105 (42.0 bits), Expect = 2.0e-08, Sum P(3) = 2.0e-08
Identities = 30/95 (31%), Positives = 47/95 (49%)
Query: 47 LYTEASFSQLNECTPPEMQRTELSSAVLQLKALGIHNILRF--SFPSPPPAQNLRVALEL 104
LY S L++ PE+ RT L LQ+K L + I F PP + + +++
Sbjct: 528 LYNGLRASLLDDYQLPEILRTPLEELCLQIKILRLGGIAYFLSRLMDPPSNEAVLLSIRH 587
Query: 105 LYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLL 139
L L A+D LT P+G +A +P+ P K++L
Sbjct: 588 LMELNALDKQEELT-PLGVHLARLPVEPHIGKMIL 621
Score = 80 (33.2 bits), Expect = 2.5e-22, Sum P(4) = 2.5e-22
Identities = 24/91 (26%), Positives = 43/91 (47%)
Query: 701 FECSDEIASILSLLQVQDIFIKPSSGALSLKARVLRRNFEVE-QGDLLTLLNIFKFYEKQ 759
F C D + +I + L +D F+ P AR R+ + + D LT++N F+ +E+
Sbjct: 626 FCCLDPVLTIAASLSFKDPFVIPLGKEKIADAR--RKELAKDTRSDHLTVVNAFEGWEEA 683
Query: 760 ENK-----KQFCHKYFFNYKVLKRAAELKNQ 785
+ K +C +YF + L+ +K Q
Sbjct: 684 RRRGFRYEKDYCWEYFLSSNTLQMLHNMKGQ 714
Score = 78 (32.5 bits), Expect = 2.5e-22, Sum P(4) = 2.5e-22
Identities = 15/37 (40%), Positives = 25/37 (67%)
Query: 2 TEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILM 38
T GI+++ DP + S I+LD++HER + +D+LM
Sbjct: 225 TTGIILQWLQSDPYLSSVSHIVLDEIHERNLQSDVLM 261
Score = 73 (30.8 bits), Expect = 2.5e-22, Sum P(4) = 2.5e-22
Identities = 17/57 (29%), Positives = 32/57 (56%)
Query: 348 RTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYYSNDPV--VNYV 402
R+ LK+I+ SAT++AE+ +++ N ++ + G +PV Y D + + YV
Sbjct: 271 RSDLKVILMSATLNAEKFSEYFG-----NCPMIHIPGFTFPVVEYLLEDVIEKIRYV 322
>UNIPROTKB|Q05B79 [details] [associations]
symbol:DHX36 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043330 "response to exogenous dsRNA" evidence=IEA]
[GO:0009615 "response to virus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0009615 GO:GO:0003725 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GO:GO:0043330 HOGENOM:HOG000247063
GeneTree:ENSGT00550000074257 CTD:170506 HOVERGEN:HBG081438
KO:K14442 OMA:RIRNRSY OrthoDB:EOG4K6G3J EMBL:DAAA02002574
EMBL:DAAA02002573 EMBL:BC122652 IPI:IPI00686397
RefSeq:NP_001073720.1 UniGene:Bt.103344 Ensembl:ENSBTAT00000008082
GeneID:509583 KEGG:bta:509583 InParanoid:Q05B79 NextBio:20869030
Uniprot:Q05B79
Length = 1010
Score = 204 (76.9 bits), Expect = 2.9e-22, Sum P(4) = 2.9e-22
Identities = 53/156 (33%), Positives = 75/156 (48%)
Query: 419 GDILAFVIGLEQIEHIIGILKQYHNQREDLKLLILPMHGSLPNNEQIKVFRPTPRAMRKI 478
G IL F+ G + I + +L + D K +I+P+H +P Q +VF+ TP +RKI
Sbjct: 491 GAILVFLPGWDNISTLHDLLMSQVMFKSD-KFIIIPLHSLMPTVNQTQVFKRTPPGVRKI 549
Query: 479 VIATNIAETSITIPGIVYVIDPGFVKARWFNPNTLTNSLVVVPISKXXXXXXXXXXXXXX 538
VIATNIAETSITI +VYVID G +K F+ +++ +SK
Sbjct: 550 VIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRKGRAGRVQ 609
Query: 539 XXHVYRKNFMYNRLFIHFCVSRNIPTIPNDPKDVKC 574
H Y +YN L +P I P + C
Sbjct: 610 PGHCYH---LYNSLRASLLDDYQLPEILRTPLEELC 642
Score = 167 (63.8 bits), Expect = 2.5e-12, Sum P(2) = 2.5e-12
Identities = 37/93 (39%), Positives = 56/93 (60%)
Query: 604 TEPRRISVTSLANRVSEELRTTLGH--TVGYTIRFDDCTTEDVTKIKYMTEGILMREMMT 661
T+PRRIS S+A RV+ E + G+ + GY IR I Y T GI+++ + +
Sbjct: 264 TQPRRISAISVAERVAAERAESCGNGNSTGYQIRLQSRLPRKQGSILYCTTGIILQWLQS 323
Query: 662 DPLLRKYSVIMLDEVHERTIFTDILMGLLKKIL 694
DP L S I+LDE+HER + +D+LM ++K +L
Sbjct: 324 DPHLSSVSHIVLDEIHERNLQSDVLMTVVKDLL 356
Score = 110 (43.8 bits), Expect = 1.3e-09, Sum P(3) = 1.3e-09
Identities = 30/95 (31%), Positives = 48/95 (50%)
Query: 47 LYTEASFSQLNECTPPEMQRTELSSAVLQLKALGIHNILRF--SFPSPPPAQNLRVALEL 104
LY S L++ PE+ RT L LQ+K L + I F PP + + ++++
Sbjct: 616 LYNSLRASLLDDYQLPEILRTPLEELCLQIKILRLGGIAHFLSRLMDPPSNEAVLLSIKH 675
Query: 105 LYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLL 139
L L A+D LT P+G +A +P+ P K++L
Sbjct: 676 LMELNALDKQEELT-PLGVHLARLPVEPHIGKMIL 709
Score = 89 (36.4 bits), Expect = 2.9e-22, Sum P(4) = 2.9e-22
Identities = 26/91 (28%), Positives = 44/91 (48%)
Query: 701 FECSDEIASILSLLQVQDIFIKPSSGALSLKARVLRRNFEVE-QGDLLTLLNIFKFYEKQ 759
F C D + +I + L +D F+ P AR R+ + + D LT++N FK +EK
Sbjct: 714 FCCLDPVLTIAASLSFKDPFVIPLGKEKVADAR--RKELAKDTKSDHLTVVNAFKGWEKA 771
Query: 760 ENK-----KQFCHKYFFNYKVLKRAAELKNQ 785
+ + K +C +YF + L+ +K Q
Sbjct: 772 KQRGFRYEKDYCWEYFLSSNTLQMLHNMKGQ 802
Score = 79 (32.9 bits), Expect = 2.9e-22, Sum P(4) = 2.9e-22
Identities = 15/37 (40%), Positives = 25/37 (67%)
Query: 2 TEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILM 38
T GI+++ DP + S I+LD++HER + +D+LM
Sbjct: 313 TTGIILQWLQSDPHLSSVSHIVLDEIHERNLQSDVLM 349
Score = 69 (29.3 bits), Expect = 2.9e-22, Sum P(4) = 2.9e-22
Identities = 16/57 (28%), Positives = 31/57 (54%)
Query: 348 RTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYYSNDPV--VNYV 402
R LK+++ SAT++AE+ +++ N ++ + G +PV Y D + + YV
Sbjct: 359 RPDLKVVLMSATLNAEKFSEYFG-----NCPMIHIPGFTFPVVEYLLEDIIEKIRYV 410
>MGI|MGI:1919412 [details] [associations]
symbol:Dhx36 "DEAH (Asp-Glu-Ala-His) box polypeptide 36"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IDA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0009615 "response to virus"
evidence=IMP] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0043330 "response to exogenous dsRNA" evidence=IMP]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
MGI:MGI:1919412 GO:GO:0005524 GO:GO:0005634 GO:GO:0009615
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GO:GO:0043330 EMBL:CH466530 HOGENOM:HOG000247063
GeneTree:ENSGT00550000074257 CTD:170506 HOVERGEN:HBG081438
KO:K14442 OMA:RIRNRSY OrthoDB:EOG4K6G3J EMBL:AF448804 EMBL:AC114424
EMBL:AK129373 EMBL:AK013031 IPI:IPI00351266 RefSeq:NP_082412.2
UniGene:Mm.224233 ProteinModelPortal:Q8VHK9 DIP:DIP-48576N
STRING:Q8VHK9 PhosphoSite:Q8VHK9 PaxDb:Q8VHK9 PRIDE:Q8VHK9
Ensembl:ENSMUST00000029336 GeneID:72162 KEGG:mmu:72162
UCSC:uc008pjn.2 InParanoid:Q8VHK9 ChiTaRS:DHX36 NextBio:335597
CleanEx:MM_DHX36 Genevestigator:Q8VHK9
GermOnline:ENSMUSG00000027770 Uniprot:Q8VHK9
Length = 1001
Score = 206 (77.6 bits), Expect = 3.4e-22, Sum P(4) = 3.4e-22
Identities = 54/156 (34%), Positives = 75/156 (48%)
Query: 419 GDILAFVIGLEQIEHIIGILKQYHNQREDLKLLILPMHGSLPNNEQIKVFRPTPRAMRKI 478
G IL F+ G + I + +L + D K LI+P+H +P Q +VF+ TP +RKI
Sbjct: 482 GAILVFLPGWDNISTLHDLLMSQVMFKSD-KFLIIPLHSLMPTVNQTQVFKKTPPGVRKI 540
Query: 479 VIATNIAETSITIPGIVYVIDPGFVKARWFNPNTLTNSLVVVPISKXXXXXXXXXXXXXX 538
VIATNIAETSITI +VYVID G +K F+ +++ +SK
Sbjct: 541 VIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRKGRAGRVQ 600
Query: 539 XXHVYRKNFMYNRLFIHFCVSRNIPTIPNDPKDVKC 574
H Y +YN L +P I P + C
Sbjct: 601 PGHCYH---LYNGLRASLLDDYQLPEILRTPLEELC 633
Score = 161 (61.7 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 36/93 (38%), Positives = 55/93 (59%)
Query: 604 TEPRRISVTSLANRVSEELRTTLGH--TVGYTIRFDDCTTEDVTKIKYMTEGILMREMMT 661
T+PRRIS S+A RV+ E + G+ + GY IR I Y T GI+++ + +
Sbjct: 255 TQPRRISAISVAERVATERAESCGNGNSTGYQIRLQSRLPRKQGSILYCTTGIILQWLQS 314
Query: 662 DPLLRKYSVIMLDEVHERTIFTDILMGLLKKIL 694
D L S I+LDE+HER + +D+LM ++K +L
Sbjct: 315 DSRLSSVSHIVLDEIHERNLQSDVLMTVIKDLL 347
Score = 105 (42.0 bits), Expect = 3.4e-08, Sum P(3) = 3.4e-08
Identities = 30/95 (31%), Positives = 48/95 (50%)
Query: 47 LYTEASFSQLNECTPPEMQRTELSSAVLQLKALGIHNILRF--SFPSPPPAQNLRVALEL 104
LY S L++ PE+ RT L LQ+K L + I F PP + + ++++
Sbjct: 607 LYNGLRASLLDDYQLPEILRTPLEELCLQIKILRLGGIAYFLSRLMDPPSNEAVVLSIKH 666
Query: 105 LYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLL 139
L L A+D LT P+G +A +P+ P K++L
Sbjct: 667 LMELSALDKQEELT-PLGVHLARLPVEPHIGKMIL 700
Score = 88 (36.0 bits), Expect = 3.4e-22, Sum P(4) = 3.4e-22
Identities = 29/112 (25%), Positives = 51/112 (45%)
Query: 701 FECSDEIASILSLLQVQDIFIKPSSGALSLKARVLRRNFEVE-QGDLLTLLNIFKFYEKQ 759
F C D + +I + L +D F+ P AR R+ E + D LT++N F+ +E+
Sbjct: 705 FCCLDPVLTIAASLSFKDPFVIPLGKEKIADAR--RKELAKETRSDHLTVVNAFEGWEEA 762
Query: 760 ENK-----KQFCHKYFFNYKVLKRAAELKNQMILLLKKSSIPLVTSPRNTNA 806
+ + K +C +YF + L+ +K Q L + SP++ A
Sbjct: 763 KRRGFRYEKDYCWEYFLSSNTLQMLHNMKGQFAEHLLGAGFVSSRSPKDPKA 814
Score = 75 (31.5 bits), Expect = 3.4e-22, Sum P(4) = 3.4e-22
Identities = 20/68 (29%), Positives = 37/68 (54%)
Query: 348 RTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYYSNDPVVNYVQGVVD 407
R+ LK+I+ SAT++AE+ +++ N ++ + G +PV Y D ++ ++ V D
Sbjct: 350 RSDLKVILMSATLNAEKFSEYFG-----NCPMIHIPGFTFPVVEYLLED-IIEKIRYVPD 403
Query: 408 TAIKIHES 415
K H S
Sbjct: 404 Q--KEHRS 409
Score = 71 (30.1 bits), Expect = 3.4e-22, Sum P(4) = 3.4e-22
Identities = 14/37 (37%), Positives = 24/37 (64%)
Query: 2 TEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILM 38
T GI+++ D + S I+LD++HER + +D+LM
Sbjct: 304 TTGIILQWLQSDSRLSSVSHIVLDEIHERNLQSDVLM 340
>TAIR|locus:2125211 [details] [associations]
symbol:AT4G01020 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0003723
"RNA binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR002867
InterPro:IPR004087 InterPro:IPR007087 InterPro:IPR007502
InterPro:IPR011545 InterPro:IPR015880 Pfam:PF00270 Pfam:PF00271
Pfam:PF01485 Pfam:PF04408 PROSITE:PS00028 PROSITE:PS00690
PROSITE:PS50089 PROSITE:PS50157 PROSITE:PS51194 SMART:SM00184
SMART:SM00322 SMART:SM00355 SMART:SM00490 SMART:SM00647
SMART:SM00847 Pfam:PF00097 Prosite:PS00518 GO:GO:0005524
GO:GO:0009507 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0046872
GO:GO:0008270 GO:GO:0003723 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 HSSP:P38398 GO:GO:0008026
EMBL:AL161491 EMBL:AL080237 KO:K12818 PIR:T10542 IPI:IPI00547897
RefSeq:NP_567206.1 UniGene:At.42970 ProteinModelPortal:P0CE10
SMR:P0CE10 PRIDE:P0CE10 EnsemblPlants:AT4G01020.1 GeneID:826439
KEGG:ath:AT4G01020 GeneFarm:1806 TAIR:At4g01020
HOGENOM:HOG000084497 PhylomeDB:P0CE10 Uniprot:P0CE10
Length = 1787
Score = 246 (91.7 bits), Expect = 4.3e-22, Sum P(3) = 4.3e-22
Identities = 68/187 (36%), Positives = 100/187 (53%)
Query: 347 KRTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYYS-----NDPVV-- 399
+R L+L+I SAT DA ++ Q+ + IL V G +PV + YS + VV
Sbjct: 446 RRIDLRLVIMSATADANQLSQYL-----FDCGILHVNGRNFPVEIVYSPSGTEENSVVGR 500
Query: 400 --NYVQGVVDTAIKIHESMPVGDILAFVIGLEQIEHIIGILKQYHNQREDLKLLILPMHG 457
+Y VV A++IH++ G ILAF+ ++E +++ + LP+HG
Sbjct: 501 IASYAGDVVKMAVEIHKTEKEGTILAFLTSQAEVEWAC---ERFVAP----SAIALPLHG 553
Query: 458 SLPNNEQIKVFRPTPRAMRKIVIATNIAETSITIPGIVYVIDPGFVKARWFNPNTLTNSL 517
L EQ VF+ P RK++ ATNIAETS+TIPG+ YVID G VK + P T + L
Sbjct: 554 KLSFEEQFMVFQNYP-GRRKVIFATNIAETSLTIPGVKYVIDSGMVKESKYEPRTGMSIL 612
Query: 518 VVVPISK 524
V +S+
Sbjct: 613 KVCQVSQ 619
Score = 166 (63.5 bits), Expect = 1.3e-10, Sum P(2) = 1.3e-10
Identities = 39/110 (35%), Positives = 67/110 (60%)
Query: 587 QYLLEAGWCYDTKLIGITEPRRISVTSLANRVSEELRTTLG-HTVGYTIRFDDCTTEDVT 645
Q+L ++G ++ T+PR+I+ +L +RV EE +TV T F +TE+++
Sbjct: 338 QFLADSGVAASESIV-CTQPRKIAAMTLTDRVREESSGCYEENTVSCTPTFS--STEEIS 394
Query: 646 -KIKYMTEGILMREMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKIL 694
K+ YMT+ L++ M D L S +++DE HER++ TD+L+ LL+K+L
Sbjct: 395 SKVVYMTDNCLLQHYMKDRSLSGISCVIIDEAHERSLNTDLLLALLRKLL 444
Score = 135 (52.6 bits), Expect = 2.6e-10, Sum P(3) = 2.6e-10
Identities = 34/97 (35%), Positives = 55/97 (56%)
Query: 46 RLYTEASFSQLNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRVALELL 105
RLY++ F +N PE++R L A+L++ ALGI NI F F P + + +A++ L
Sbjct: 639 RLYSKTDFDSMNLNQEPEIRRVHLGVALLRMLALGIDNIAAFEFVDAPVPEAIAMAIQNL 698
Query: 106 YSLGAM-DVNG--NLTKPVGETMAEMPLHPIHAKVLL 139
LGA+ + NG LT+ G + ++ L P K++L
Sbjct: 699 VQLGAVVEKNGVLELTQE-GHCLVKLGLEPKLGKLIL 734
Score = 79 (32.9 bits), Expect = 4.3e-22, Sum P(3) = 4.3e-22
Identities = 37/161 (22%), Positives = 75/161 (46%)
Query: 707 IASILSLLQVQDIFIKPSSGALSLKARVLRRNFEVEQGDLLTLLNIFKFYEK--QENKKQ 764
+A++++ IF + + +KA L+ F + GDL TLL+++K + ++ + +
Sbjct: 748 LAAVMA--NASSIFCRVGNFDDKMKADRLKVQFCNDNGDLFTLLSVYKEWASLPRDRRNK 805
Query: 765 FCHKYFFNYKVLKRAAELKNQMILLLKKSSIPLVTSPR----NTNAVLK-------CLTN 813
+C + N K ++R + ++ + +++ + LV SP N N K +
Sbjct: 806 WCWENSLNAKSMRRCEDTVKELEICIERE-LTLV-SPSYWVWNPNEGTKHDKYLKMVILA 863
Query: 814 GFFSNAA-YLHYSGV-YRTVRGNEDLYIHPS-SVLYTLQQP 851
N A Y Y + Y ++ + +HPS S+L Q+P
Sbjct: 864 SLAENVAMYTGYDQLGYEVALTSQQVQLHPSCSLLAFGQKP 904
Score = 78 (32.5 bits), Expect = 4.3e-22, Sum P(3) = 4.3e-22
Identities = 15/43 (34%), Positives = 28/43 (65%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILMECSRK 43
MT+ L+++ D S+ S +++D+ HER++ TD+L+ RK
Sbjct: 400 MTDNCLLQHYMKDRSLSGISCVIIDEAHERSLNTDLLLALLRK 442
Score = 45 (20.9 bits), Expect = 1.3e-18, Sum P(3) = 1.3e-18
Identities = 26/93 (27%), Positives = 42/93 (45%)
Query: 608 RISVTSLANRVSEELRTTLGHTV-GYTIRFDDCTTEDVTKIKYMTEGI-LMREMMTDPLL 665
R+ +T+ A R E+R L + G I T V + +GI LMR++ +
Sbjct: 1380 RVKITAYATRPVAEMRRELEELLRGKPINHPGFTPRVVQHLM-SRDGINLMRKIQQET-- 1436
Query: 666 RKYSVIMLDEVHERTIFTDILMGLLKKILKDKE 698
Y I+LD H T+ + G +KI K ++
Sbjct: 1437 ETY--ILLDR-HNLTVR---ICGTSEKIAKAEQ 1463
>UNIPROTKB|F5H3Y4 [details] [associations]
symbol:DHX37 "Probable ATP-dependent RNA helicase DHX37"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 IPI:IPI00217630 HGNC:HGNC:17210
EMBL:AC093719 ProteinModelPortal:F5H3Y4 SMR:F5H3Y4
Ensembl:ENST00000544745 ArrayExpress:F5H3Y4 Bgee:F5H3Y4
Uniprot:F5H3Y4
Length = 962
Score = 263 (97.6 bits), Expect = 1.5e-19, Sum P(3) = 1.5e-19
Identities = 54/138 (39%), Positives = 94/138 (68%)
Query: 587 QYLLEAGWCYDTKLIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTK 646
Q+L EAG+ + +IG+TEPRR++ +++ RV++E+ + V Y IR++ TE+ T+
Sbjct: 74 QFLYEAGFSSEDSIIGVTEPRRVAAVAMSQRVAKEMNLSQ-RVVSYQIRYEGNVTEE-TR 131
Query: 647 IKYMTEGILMREMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKILKDK-ERDFECSD 705
IK+MT+G+L++E+ D LL +Y V+++DE HER+++TDIL+GLL +I+ + +R+
Sbjct: 132 IKFMTDGVLLKEIQKDFLLLRYKVVIIDEAHERSVYTDILIGLLSRIVTLRAKRNLPLKL 191
Query: 706 EIASILSLLQVQDIFIKP 723
I S + L+V+D P
Sbjct: 192 LIMS--ATLRVEDFTQNP 207
Score = 175 (66.7 bits), Expect = 5.3e-22, Sum P(5) = 5.3e-22
Identities = 38/97 (39%), Positives = 54/97 (55%)
Query: 448 LKLLILPMHGSLPNNEQIKVFRPTPRAMRKIVIATNIAETSITIPGIVYVIDPGFVKARW 507
L L +LP++ L +Q +VF+P P R V+ATN+AETS+TIPGI YV+D G VK R+
Sbjct: 373 LPLHVLPLYSLLAPEKQAQVFKPPPEGTRLCVVATNVAETSLTIPGIKYVVDCGKVKKRY 432
Query: 508 FNPNTLTNSLVVVPISKXXXXXXXXXXXXXXXXHVYR 544
++ T +S V +S+ H YR
Sbjct: 433 YDRVTGVSSFRVTWVSQASADQRAGRAGRTEPGHCYR 469
Score = 159 (61.0 bits), Expect = 1.7e-13, Sum P(4) = 1.7e-13
Identities = 39/110 (35%), Positives = 57/110 (51%)
Query: 46 RLYTEASFSQLNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRVALELL 105
RLY+ A F + PPE+ R + +LQ+KAL + ++ F FP+PP + L A ELL
Sbjct: 469 RLYSSAVFGDFEQFPPPEITRRPVEDLILQMKALNVEKVINFPFPTPPSVEALLAAEELL 528
Query: 106 YSLGAMDV-----------NGNLTKPV---GETMAEMPLHPIHAKVLLSS 141
+LGA+ L+ P+ G TMA P+ P +AK+L S
Sbjct: 529 IALGALQPPQKAERVKQLQENRLSCPITALGRTMATFPVAPRYAKMLALS 578
Score = 108 (43.1 bits), Expect = 5.3e-22, Sum P(5) = 5.3e-22
Identities = 27/99 (27%), Positives = 50/99 (50%)
Query: 343 LKPLKRTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYYSN-DPVVNY 401
L+ + LKL+I SAT+ E+ Q + A ++ V+ +PV+V+++ P+ +Y
Sbjct: 181 LRAKRNLPLKLLIMSATLRVEDFTQNPRLFAKP-PPVIKVESRQFPVTVHFNKRTPLEDY 239
Query: 402 VQGVVDTAIKIHESMPVGDILAFVIGLEQIEHIIGILKQ 440
KIH +P G IL F+ G ++ + L++
Sbjct: 240 SGECFRKVCKIHRMLPAGGILVFLTGQAEVHALCRRLRK 278
Score = 93 (37.8 bits), Expect = 5.3e-22, Sum P(5) = 5.3e-22
Identities = 15/38 (39%), Positives = 29/38 (76%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILM 38
MT+G+L++ D + +Y V+++D+ HER+++TDIL+
Sbjct: 135 MTDGVLLKEIQKDFLLLRYKVVIIDEAHERSVYTDILI 172
Score = 53 (23.7 bits), Expect = 5.3e-22, Sum P(5) = 5.3e-22
Identities = 13/43 (30%), Positives = 17/43 (39%)
Query: 744 GDLLTLLNIFKFYEKQENKKQFCHKYFFNYKVLKRAAELKNQM 786
GDL+ LL E QFC YK + L+ Q+
Sbjct: 640 GDLMVLLGAVGACEYASCTPQFCEANGLRYKAMMEIRRLRGQL 682
Score = 51 (23.0 bits), Expect = 5.3e-22, Sum P(5) = 5.3e-22
Identities = 9/23 (39%), Positives = 16/23 (69%)
Query: 824 YSGVYRTVRGNEDLYIHPSSVLY 846
+ Y+T ++ ++IHPSSVL+
Sbjct: 738 WRNAYKTPLLDDPVFIHPSSVLF 760
Score = 42 (19.8 bits), Expect = 2.0e-15, Sum P(5) = 2.0e-15
Identities = 17/67 (25%), Positives = 28/67 (41%)
Query: 298 FKMSQGKPSDSGVEPISQSYLVELSILAPGGQDVIGEDMKAFAEQLKPLKRTQLKLIISS 357
FK S+ + + E + Q L S+L G D ED +A ++ + + L L +
Sbjct: 304 FKKSRARAKKARAEVLPQINLDHYSVLPAGEGD---EDREAEVDEEEGALDSDLDLDLGD 360
Query: 358 ATVDAEE 364
D E
Sbjct: 361 GGQDGGE 367
>UNIPROTKB|G4NGS5 [details] [associations]
symbol:MGG_04040 "DEAH box polypeptide 37" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
EMBL:CM001236 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K14780
RefSeq:XP_003719802.1 ProteinModelPortal:G4NGS5
EnsemblFungi:MGG_04040T0 GeneID:2677154 KEGG:mgr:MGG_04040
Uniprot:G4NGS5
Length = 1185
Score = 257 (95.5 bits), Expect = 6.7e-22, Sum P(3) = 6.7e-22
Identities = 54/113 (47%), Positives = 80/113 (70%)
Query: 587 QYLLEAGW-CYDTK---LIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTE 642
Q+L EAG+ D+ +IGIT+PRR++ S++ RV+EEL VGY IRF+ +
Sbjct: 392 QFLFEAGYGSPDSPTPGMIGITQPRRVAAVSMSKRVAEELGDH-SQKVGYQIRFEGTVNK 450
Query: 643 DVTKIKYMTEGILMREMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKILK 695
D T +K+MT+G+L+RE+ D LRKYS I++DE HER++ TDIL+G+L +I+K
Sbjct: 451 D-TAVKFMTDGVLLREVAQDLALRKYSAIVVDEAHERSVNTDILIGMLSRIIK 502
Score = 176 (67.0 bits), Expect = 1.0e-20, Sum P(4) = 1.0e-20
Identities = 47/140 (33%), Positives = 68/140 (48%)
Query: 449 KLLILPMHGSLPNNEQIKVFRPTPRAMRKIVIATNIAETSITIPGIVYVIDPGFVKARWF 508
++ +LP++ LP EQ++VF P P R +V+ATN+AETS+TIPGI YV D G K R +
Sbjct: 674 RMHVLPLYSLLPTKEQLRVFEPPPDGSRLVVLATNVAETSLTIPGIRYVFDSGRSKERKY 733
Query: 509 NPNTLTNSLVVVPISKXXXXXXXXXXXXXXXXHVYR--KNFMYNRLFIHFCVSRNIPT-I 565
+ T S V ISK H +R + +Y R F + + T +
Sbjct: 734 DQLTGVQSFEVGWISKASANQREGRAGRTGPGHCWRLYSSAVYERDLDEFALPELLRTSL 793
Query: 566 PNDPKDVKCDVMFHKVFFSF 585
+K + H V F F
Sbjct: 794 EGVVLQLKSMNLQHVVNFPF 813
Score = 163 (62.4 bits), Expect = 8.0e-12, Sum P(3) = 8.0e-12
Identities = 36/95 (37%), Positives = 59/95 (62%)
Query: 46 RLYTEASFSQ-LNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRVALEL 104
RLY+ A + + L+E PE+ RT L VLQLK++ + +++ F FP+PP +L + +L
Sbjct: 769 RLYSSAVYERDLDEFALPELLRTSLEGVVLQLKSMNLQHVVNFPFPTPPERDSLVKSEKL 828
Query: 105 LYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLL 139
L + A+ G +T+ VG TM+ PL P +++LL
Sbjct: 829 LKYISAVSEEGRVTQ-VGYTMSIFPLSPRFSRILL 862
Score = 118 (46.6 bits), Expect = 1.0e-20, Sum P(4) = 1.0e-20
Identities = 28/93 (30%), Positives = 51/93 (54%)
Query: 351 LKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYYSNDPVVNYVQGVVDTAI 410
LKL+I SAT+ E++ + N+ A+ +L V+G YPV+++++ +YV+
Sbjct: 517 LKLVIMSATLRIEDLTENKNLFATP-PPVLEVEGRQYPVTLHFARKTHHDYVEEAFRKIS 575
Query: 411 KIHESMPVGDILAFVIGLEQIEHIIGILKQYHN 443
+ H+ +P G +L F+ G +I + LK N
Sbjct: 576 RGHKKLPPGGMLVFLTGQNEITQLSKRLKLQFN 608
Score = 112 (44.5 bits), Expect = 4.2e-20, Sum P(4) = 4.2e-20
Identities = 30/94 (31%), Positives = 52/94 (55%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILMECSRKFSRLYTEASFSQLNECT 60
MT+G+L+ D ++ KYS I++D+ HER++ TDIL+ + +L A +Q +
Sbjct: 457 MTDGVLLREVAQDLALRKYSAIVVDEAHERSVNTDILIGMLSRIIKL--RAEMAQEDPTV 514
Query: 61 PPEMQRTELSSAVLQLKALGIHNILRFSFPSPPP 94
P + + SA L+++ L + L F +PPP
Sbjct: 515 KP--LKLVIMSATLRIEDLTENKNL---FATPPP 543
Score = 91 (37.1 bits), Expect = 6.7e-22, Sum P(3) = 6.7e-22
Identities = 22/81 (27%), Positives = 44/81 (54%)
Query: 718 DIFIKPSSGALSLKARVLRRNFEV--EQGDLLTLLNIFKFYEKQENKKQFCHKYFFNYKV 775
DI + A+ + + +NF ++ D + +L + + + +K +C +F +KV
Sbjct: 909 DIQAETKQAAIRRQFNAVNKNFCFLDDKSDAIKMLQVLGEFAHEPTEK-WCESHFVRFKV 967
Query: 776 LKRAAELKNQMILLLKKSSIP 796
LK A +L+ Q++ LLK ++IP
Sbjct: 968 LKEAQKLRQQIVQLLK-TNIP 987
Score = 46 (21.3 bits), Expect = 6.7e-22, Sum P(3) = 6.7e-22
Identities = 9/17 (52%), Positives = 11/17 (64%)
Query: 837 LYIHPSSVLYTLQQPQC 853
+YIHPSS L L +C
Sbjct: 1066 VYIHPSSPLAHLSTSEC 1082
Score = 37 (18.1 bits), Expect = 2.3e-16, Sum P(3) = 2.3e-16
Identities = 12/48 (25%), Positives = 22/48 (45%)
Query: 718 DIFIKPSSGALSLKARVLRRNFEVEQGDLLTLLNIFKFYEKQENKKQF 765
DI I S + L+A + + + V+ L+ + + + ENK F
Sbjct: 491 DILIGMLSRIIKLRAEMAQEDPTVKPLKLVIMSATLRIEDLTENKNLF 538
>UNIPROTKB|B0V0F8 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR002464 InterPro:IPR011545
Pfam:PF00270 PROSITE:PS00690 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
HOVERGEN:HBG039428 HGNC:HGNC:2739 OrthoDB:EOG4VHK5Q EMBL:CR759873
IPI:IPI00894081 SMR:B0V0F8 Ensembl:ENST00000450902 Uniprot:B0V0F8
Length = 669
Score = 288 (106.4 bits), Expect = 8.4e-22, P = 8.4e-22
Identities = 54/109 (49%), Positives = 79/109 (72%)
Query: 587 QYLLEAGWCYDTKLIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTK 646
QYL E G+ I T+PRR++ S+A RV+ E+ LG+ VGY+IRF+DCT+E T
Sbjct: 434 QYLFEEGYTNKGMKIACTQPRRVAAMSVAARVAREMGVKLGNEVGYSIRFEDCTSER-TV 492
Query: 647 IKYMTEGILMREMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKILK 695
++YMT+G+L+RE +++P L YSV+M+DE HERT+ TDIL GL+K + +
Sbjct: 493 LRYMTDGMLLREFLSEPDLASYSVVMVDEAHERTLHTDILFGLIKDVAR 541
Score = 212 (79.7 bits), Expect = 3.7e-19, Sum P(2) = 3.7e-19
Identities = 42/132 (31%), Positives = 80/132 (60%)
Query: 348 RTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYYSNDPVVNYVQGVVD 407
R +LK++++SAT+D F++ +A + + G +PV ++Y+ P +Y++ V
Sbjct: 543 RPELKVLVASATMDTARFSTFFD-----DAPVFRIPGRRFPVDIFYTKAPEADYLEACVV 597
Query: 408 TAIKIHESMPVGDILAFVIGLEQIEHIIGILKQYHNQ--REDLKLLILPMHGSLPNNEQI 465
+ ++IH + P GDIL F+ G E+IE +L+ + + +LL+LP++ +LP++ Q
Sbjct: 598 SVLQIHVTQPPGDILVFLTGQEEIEAACEMLQDRCRRLGSKIRELLVLPIYANLPSDMQA 657
Query: 466 KVFRPTPRAMRK 477
++F+PTP RK
Sbjct: 658 RIFQPTPPGARK 669
Score = 103 (41.3 bits), Expect = 3.7e-19, Sum P(2) = 3.7e-19
Identities = 20/50 (40%), Positives = 31/50 (62%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILMECSRKFSRLYTE 50
MT+G+L+ +P + YSV+M+D+ HERT+ TDIL + +R E
Sbjct: 496 MTDGMLLREFLSEPDLASYSVVMVDEAHERTLHTDILFGLIKDVARFRPE 545
>UNIPROTKB|Q9H2U1 [details] [associations]
symbol:DHX36 "Probable ATP-dependent RNA helicase DHX36"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IEA] [GO:0009615
"response to virus" evidence=IEA] [GO:0043330 "response to
exogenous dsRNA" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
EMBL:CH471052 GO:GO:0009615 GO:GO:0003725 EMBL:AC018452
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 GO:GO:0043330
HOGENOM:HOG000247063 EMBL:AF217190 EMBL:AJ577133 EMBL:AJ577134
EMBL:AK314435 EMBL:AC134026 EMBL:BC036035 EMBL:AB040921
IPI:IPI00027415 IPI:IPI00217760 IPI:IPI00784170 PIR:D56236
RefSeq:NP_001107869.1 RefSeq:NP_065916.2 UniGene:Hs.446270
ProteinModelPortal:Q9H2U1 SMR:Q9H2U1 IntAct:Q9H2U1
MINT:MINT-3066797 STRING:Q9H2U1 PhosphoSite:Q9H2U1 DMDM:74762733
PaxDb:Q9H2U1 PRIDE:Q9H2U1 DNASU:170506 Ensembl:ENST00000308361
Ensembl:ENST00000329463 Ensembl:ENST00000496811 GeneID:170506
KEGG:hsa:170506 UCSC:uc003ezy.4 UCSC:uc003ezz.4 UCSC:uc010hvq.3
CTD:170506 GeneCards:GC03M153990 HGNC:HGNC:14410 HPA:HPA035399
MIM:612767 neXtProt:NX_Q9H2U1 PharmGKB:PA27223 HOVERGEN:HBG081438
InParanoid:Q9H2U1 KO:K14442 OMA:RIRNRSY OrthoDB:EOG4K6G3J
PhylomeDB:Q9H2U1 GenomeRNAi:170506 NextBio:88959
ArrayExpress:Q9H2U1 Bgee:Q9H2U1 CleanEx:HS_DHX36
Genevestigator:Q9H2U1 GermOnline:ENSG00000174953 Uniprot:Q9H2U1
Length = 1008
Score = 205 (77.2 bits), Expect = 9.3e-22, Sum P(4) = 9.3e-22
Identities = 54/156 (34%), Positives = 75/156 (48%)
Query: 419 GDILAFVIGLEQIEHIIGILKQYHNQREDLKLLILPMHGSLPNNEQIKVFRPTPRAMRKI 478
G IL F+ G + I + +L + D K LI+P+H +P Q +VF+ TP +RKI
Sbjct: 489 GAILVFLPGWDNISTLHDLLMSQVMFKSD-KFLIIPLHSLMPTVNQTQVFKRTPPGVRKI 547
Query: 479 VIATNIAETSITIPGIVYVIDPGFVKARWFNPNTLTNSLVVVPISKXXXXXXXXXXXXXX 538
VIATNIAETSITI +VYVID G +K F+ +++ +SK
Sbjct: 548 VIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRKGRAGRVQ 607
Query: 539 XXHVYRKNFMYNRLFIHFCVSRNIPTIPNDPKDVKC 574
H Y +YN L +P I P + C
Sbjct: 608 PGHCYH---LYNGLRASLLDDYQLPEILRTPLEELC 640
Score = 169 (64.5 bits), Expect = 1.3e-11, Sum P(2) = 1.3e-11
Identities = 37/93 (39%), Positives = 56/93 (60%)
Query: 604 TEPRRISVTSLANRVSEELRTTLG--HTVGYTIRFDDCTTEDVTKIKYMTEGILMREMMT 661
T+PRRIS S+A RV+ E + G ++ GY IR I Y T GI+++ + +
Sbjct: 262 TQPRRISAISVAERVAAERAESCGSGNSTGYQIRLQSRLPRKQGSILYCTTGIILQWLQS 321
Query: 662 DPLLRKYSVIMLDEVHERTIFTDILMGLLKKIL 694
DP L S I+LDE+HER + +D+LM ++K +L
Sbjct: 322 DPYLSSVSHIVLDEIHERNLQSDVLMTVVKDLL 354
Score = 105 (42.0 bits), Expect = 4.4e-08, Sum P(3) = 4.4e-08
Identities = 30/95 (31%), Positives = 47/95 (49%)
Query: 47 LYTEASFSQLNECTPPEMQRTELSSAVLQLKALGIHNILRF--SFPSPPPAQNLRVALEL 104
LY S L++ PE+ RT L LQ+K L + I F PP + + +++
Sbjct: 614 LYNGLRASLLDDYQLPEILRTPLEELCLQIKILRLGGIAYFLSRLMDPPSNEAVLLSIRH 673
Query: 105 LYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLL 139
L L A+D LT P+G +A +P+ P K++L
Sbjct: 674 LMELNALDKQEELT-PLGVHLARLPVEPHIGKMIL 707
Score = 80 (33.2 bits), Expect = 9.3e-22, Sum P(4) = 9.3e-22
Identities = 24/91 (26%), Positives = 43/91 (47%)
Query: 701 FECSDEIASILSLLQVQDIFIKPSSGALSLKARVLRRNFEVE-QGDLLTLLNIFKFYEKQ 759
F C D + +I + L +D F+ P AR R+ + + D LT++N F+ +E+
Sbjct: 712 FCCLDPVLTIAASLSFKDPFVIPLGKEKIADAR--RKELAKDTRSDHLTVVNAFEGWEEA 769
Query: 760 ENK-----KQFCHKYFFNYKVLKRAAELKNQ 785
+ K +C +YF + L+ +K Q
Sbjct: 770 RRRGFRYEKDYCWEYFLSSNTLQMLHNMKGQ 800
Score = 78 (32.5 bits), Expect = 9.3e-22, Sum P(4) = 9.3e-22
Identities = 15/37 (40%), Positives = 25/37 (67%)
Query: 2 TEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILM 38
T GI+++ DP + S I+LD++HER + +D+LM
Sbjct: 311 TTGIILQWLQSDPYLSSVSHIVLDEIHERNLQSDVLM 347
Score = 73 (30.8 bits), Expect = 9.3e-22, Sum P(4) = 9.3e-22
Identities = 17/57 (29%), Positives = 32/57 (56%)
Query: 348 RTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYYSNDPV--VNYV 402
R+ LK+I+ SAT++AE+ +++ N ++ + G +PV Y D + + YV
Sbjct: 357 RSDLKVILMSATLNAEKFSEYFG-----NCPMIHIPGFTFPVVEYLLEDVIEKIRYV 408
>FB|FBgn0032883 [details] [associations]
symbol:CG9323 species:7227 "Drosophila melanogaster"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0004386 "helicase activity" evidence=ISS] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0002151 "G-quadruplex RNA binding"
evidence=IDA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 EMBL:AE014134 GO:GO:0002151
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
GeneTree:ENSGT00550000074257 KO:K14442 EMBL:AY095176
RefSeq:NP_610056.1 UniGene:Dm.11353 SMR:Q8SWT2 MINT:MINT-935813
EnsemblMetazoa:FBtr0081459 GeneID:35339 KEGG:dme:Dmel_CG9323
UCSC:CG9323-RA FlyBase:FBgn0032883 InParanoid:Q8SWT2 OMA:PLGMHLA
OrthoDB:EOG4HQC07 GenomeRNAi:35339 NextBio:793041 Uniprot:Q8SWT2
Length = 942
Score = 224 (83.9 bits), Expect = 2.8e-17, Sum P(2) = 2.8e-17
Identities = 45/100 (45%), Positives = 67/100 (67%)
Query: 595 CYDTKLIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTKIKYMTEGI 654
C + I T+PRRIS ++A VS E +LG++VGY IR + + I Y T G+
Sbjct: 199 CASSCRIICTQPRRISAIAIAEWVSYERCESLGNSVGYQIRLESRKARERASITYCTTGV 258
Query: 655 LMREMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKIL 694
L++++ +DPL+ SV++LDE+HER++ TD+LMGLLK IL
Sbjct: 259 LLQQLQSDPLMHNLSVLILDEIHERSVETDLLMGLLKVIL 298
Score = 183 (69.5 bits), Expect = 1.5e-21, Sum P(4) = 1.5e-21
Identities = 46/123 (37%), Positives = 67/123 (54%)
Query: 405 VVDTAIKIHESMPVGDILAFVIGLEQIEHIIGIL---KQYHNQREDLKLLILPMHGSLPN 461
+ D I E+ P G IL F+ G ++I + IL K QR + + P+H + +
Sbjct: 409 IADLVYYICENEPEGAILVFLPGYDKISQLYNILDKPKTSKGQRWRDHMAVFPLHSLMQS 468
Query: 462 NEQIKVFRPTPRAMRKIVIATNIAETSITIPGIVYVIDPGFVKARWFNPNTLTNSLVVVP 521
EQ VFR P RK++I+T IAETS+TI +VYVI+ G KA ++ T SL V
Sbjct: 469 GEQQAVFRRPPAGQRKVIISTIIAETSVTIDDVVYVINSGRTKATNYDIETNIQSLDEVW 528
Query: 522 ISK 524
++K
Sbjct: 529 VTK 531
Score = 131 (51.2 bits), Expect = 3.9e-12, Sum P(3) = 3.9e-12
Identities = 31/97 (31%), Positives = 58/97 (59%)
Query: 47 LYTEASFSQLNECTPPEMQRTELSSAVLQLKALGIHNILRF--SFPSPPPAQNLRVALEL 104
L++ A ++++ PE+ R++L S +L LK L I + RF + + P + +++ +EL
Sbjct: 552 LFSRAREDRMDDIPTPEILRSKLESIILSLKLLHIDDPYRFLQTLINAPNPEAIKMGVEL 611
Query: 105 LYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLLSS 141
L + A+D G LT P+G +A++P+ P K++L S
Sbjct: 612 LKRIEALDQTGTLT-PLGMHLAKLPIDPQMGKMILMS 647
Score = 93 (37.8 bits), Expect = 1.5e-21, Sum P(4) = 1.5e-21
Identities = 16/37 (43%), Positives = 27/37 (72%)
Query: 2 TEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILM 38
T G+L++ DP + SV++LD++HER++ TD+LM
Sbjct: 255 TTGVLLQQLQSDPLMHNLSVLILDEIHERSVETDLLM 291
Score = 81 (33.6 bits), Expect = 1.5e-21, Sum P(4) = 1.5e-21
Identities = 18/56 (32%), Positives = 31/56 (55%)
Query: 348 RTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYYSNDPV--VNY 401
R LK+I+ SATV ++ C ++N N + ++G ++PV + Y D + NY
Sbjct: 301 RPDLKVILMSATVREQDFCDYFN-----NCPMFRIEGVMFPVKMLYLEDVLSKTNY 351
Score = 77 (32.2 bits), Expect = 1.5e-21, Sum P(4) = 1.5e-21
Identities = 35/137 (25%), Positives = 59/137 (43%)
Query: 701 FECSDEIASILSLLQVQDIFIKPSSGALSLKARVLRRNFEVEQGDLLTLLN-IFKFYEKQ 759
F C D I S + L + F P G S + RR + D L + N I + + +
Sbjct: 650 FCCLDPITSAAAALSFKSPFYSPL-GKESRVDEIKRRMARNMRSDHLMVHNTIIAYRDSR 708
Query: 760 EN--KKQFCHKYFFNYKVLKRAAELKNQMILLL------KKSSIPLVTSPRNTNAV--LK 809
+ ++ FC+K F + L++ +KNQ LL S+ S +N+ + L+
Sbjct: 709 YSHAERDFCYKNFLSSMTLQQLERMKNQFSELLYNYKFLASSNCKDAASNKNSEKIPLLR 768
Query: 810 CLTN-GFFSNAAYLHYS 825
+ G + N A+L S
Sbjct: 769 AIIGAGLYPNMAHLRKS 785
>UNIPROTKB|Q8IY37 [details] [associations]
symbol:DHX37 "Probable ATP-dependent RNA helicase DHX37"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000201240 KO:K14780 EMBL:BC002575 EMBL:BC037964
EMBL:AB040950 IPI:IPI00217630 RefSeq:NP_116045.2 UniGene:Hs.107382
ProteinModelPortal:Q8IY37 SMR:Q8IY37 IntAct:Q8IY37 STRING:Q8IY37
PhosphoSite:Q8IY37 DMDM:38257651 PaxDb:Q8IY37 PRIDE:Q8IY37
Ensembl:ENST00000308736 GeneID:57647 KEGG:hsa:57647 UCSC:uc001ugy.3
CTD:57647 GeneCards:GC12M125431 HGNC:HGNC:17210 HPA:HPA047607
neXtProt:NX_Q8IY37 PharmGKB:PA27224 HOVERGEN:HBG051356
InParanoid:Q8IY37 OMA:AKLQPRT OrthoDB:EOG4P2Q1J PhylomeDB:Q8IY37
GenomeRNAi:57647 NextBio:64382 ArrayExpress:Q8IY37 Bgee:Q8IY37
CleanEx:HS_DHX37 Genevestigator:Q8IY37 GermOnline:ENSG00000150990
Uniprot:Q8IY37
Length = 1157
Score = 263 (97.6 bits), Expect = 5.1e-19, Sum P(4) = 5.1e-19
Identities = 54/138 (39%), Positives = 94/138 (68%)
Query: 587 QYLLEAGWCYDTKLIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTK 646
Q+L EAG+ + +IG+TEPRR++ +++ RV++E+ + V Y IR++ TE+ T+
Sbjct: 287 QFLYEAGFSSEDSIIGVTEPRRVAAVAMSQRVAKEMNLSQ-RVVSYQIRYEGNVTEE-TR 344
Query: 647 IKYMTEGILMREMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKILKDK-ERDFECSD 705
IK+MT+G+L++E+ D LL +Y V+++DE HER+++TDIL+GLL +I+ + +R+
Sbjct: 345 IKFMTDGVLLKEIQKDFLLLRYKVVIIDEAHERSVYTDILIGLLSRIVTLRAKRNLPLKL 404
Query: 706 EIASILSLLQVQDIFIKP 723
I S + L+V+D P
Sbjct: 405 LIMS--ATLRVEDFTQNP 420
Score = 175 (66.7 bits), Expect = 1.6e-21, Sum P(5) = 1.6e-21
Identities = 38/97 (39%), Positives = 54/97 (55%)
Query: 448 LKLLILPMHGSLPNNEQIKVFRPTPRAMRKIVIATNIAETSITIPGIVYVIDPGFVKARW 507
L L +LP++ L +Q +VF+P P R V+ATN+AETS+TIPGI YV+D G VK R+
Sbjct: 586 LPLHVLPLYSLLAPEKQAQVFKPPPEGTRLCVVATNVAETSLTIPGIKYVVDCGKVKKRY 645
Query: 508 FNPNTLTNSLVVVPISKXXXXXXXXXXXXXXXXHVYR 544
++ T +S V +S+ H YR
Sbjct: 646 YDRVTGVSSFRVTWVSQASADQRAGRAGRTEPGHCYR 682
Score = 159 (61.0 bits), Expect = 4.1e-13, Sum P(4) = 4.1e-13
Identities = 39/110 (35%), Positives = 57/110 (51%)
Query: 46 RLYTEASFSQLNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRVALELL 105
RLY+ A F + PPE+ R + +LQ+KAL + ++ F FP+PP + L A ELL
Sbjct: 682 RLYSSAVFGDFEQFPPPEITRRPVEDLILQMKALNVEKVINFPFPTPPSVEALLAAEELL 741
Query: 106 YSLGAMDV-----------NGNLTKPV---GETMAEMPLHPIHAKVLLSS 141
+LGA+ L+ P+ G TMA P+ P +AK+L S
Sbjct: 742 IALGALQPPQKAERVKQLQENRLSCPITALGRTMATFPVAPRYAKMLALS 791
Score = 108 (43.1 bits), Expect = 1.6e-21, Sum P(5) = 1.6e-21
Identities = 27/99 (27%), Positives = 50/99 (50%)
Query: 343 LKPLKRTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYYSN-DPVVNY 401
L+ + LKL+I SAT+ E+ Q + A ++ V+ +PV+V+++ P+ +Y
Sbjct: 394 LRAKRNLPLKLLIMSATLRVEDFTQNPRLFAKP-PPVIKVESRQFPVTVHFNKRTPLEDY 452
Query: 402 VQGVVDTAIKIHESMPVGDILAFVIGLEQIEHIIGILKQ 440
KIH +P G IL F+ G ++ + L++
Sbjct: 453 SGECFRKVCKIHRMLPAGGILVFLTGQAEVHALCRRLRK 491
Score = 93 (37.8 bits), Expect = 1.6e-21, Sum P(5) = 1.6e-21
Identities = 15/38 (39%), Positives = 29/38 (76%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILM 38
MT+G+L++ D + +Y V+++D+ HER+++TDIL+
Sbjct: 348 MTDGVLLKEIQKDFLLLRYKVVIIDEAHERSVYTDILI 385
Score = 53 (23.7 bits), Expect = 1.6e-21, Sum P(5) = 1.6e-21
Identities = 13/43 (30%), Positives = 17/43 (39%)
Query: 744 GDLLTLLNIFKFYEKQENKKQFCHKYFFNYKVLKRAAELKNQM 786
GDL+ LL E QFC YK + L+ Q+
Sbjct: 853 GDLMVLLGAVGACEYASCTPQFCEANGLRYKAMMEIRRLRGQL 895
Score = 51 (23.0 bits), Expect = 1.6e-21, Sum P(5) = 1.6e-21
Identities = 9/23 (39%), Positives = 16/23 (69%)
Query: 824 YSGVYRTVRGNEDLYIHPSSVLY 846
+ Y+T ++ ++IHPSSVL+
Sbjct: 951 WRNAYKTPLLDDPVFIHPSSVLF 973
Score = 42 (19.8 bits), Expect = 6.0e-15, Sum P(5) = 6.0e-15
Identities = 17/67 (25%), Positives = 28/67 (41%)
Query: 298 FKMSQGKPSDSGVEPISQSYLVELSILAPGGQDVIGEDMKAFAEQLKPLKRTQLKLIISS 357
FK S+ + + E + Q L S+L G D ED +A ++ + + L L +
Sbjct: 517 FKKSRARAKKARAEVLPQINLDHYSVLPAGEGD---EDREAEVDEEEGALDSDLDLDLGD 573
Query: 358 ATVDAEE 364
D E
Sbjct: 574 GGQDGGE 580
Score = 41 (19.5 bits), Expect = 5.1e-19, Sum P(4) = 5.1e-19
Identities = 14/47 (29%), Positives = 21/47 (44%)
Query: 90 PSPPPAQNLRVALELLYSLGAMDVNGNLTKPVGETMAEMPLHPIHAK 136
P PPP Q + LE +L +D + L P G+ + P+ K
Sbjct: 25 PEPPPVQ---LELEDKDTLKGVDASNALVLP-GKKKKKTKAPPLSKK 67
>UNIPROTKB|E1BNQ2 [details] [associations]
symbol:DHX37 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074985 KO:K14780 CTD:57647 EMBL:DAAA02045204
IPI:IPI00698261 RefSeq:NP_001192890.1 UniGene:Bt.8113 PRIDE:E1BNQ2
Ensembl:ENSBTAT00000027206 GeneID:529207 KEGG:bta:529207
OMA:ANCRDAL NextBio:20874985 Uniprot:E1BNQ2
Length = 1155
Score = 272 (100.8 bits), Expect = 3.7e-19, Sum P(3) = 3.7e-19
Identities = 50/113 (44%), Positives = 84/113 (74%)
Query: 587 QYLLEAGWCYDTKLIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTK 646
Q+L EAG+ D +IG+TEPRR++ +++ RV++E+ + V Y IR++ TE+ T+
Sbjct: 285 QFLYEAGYSSDNSVIGVTEPRRVAAVAMSQRVAKEMNLS-PRVVSYQIRYEGNVTEE-TR 342
Query: 647 IKYMTEGILMREMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKILKDKER 699
IK+MT+G+L++E+ D LL KY V+++DE HER+++TDIL+GLL +I+ +E+
Sbjct: 343 IKFMTDGVLLKEIQKDFLLLKYKVVIIDEAHERSVYTDILIGLLSRIVCLREK 395
Score = 170 (64.9 bits), Expect = 1.8e-21, Sum P(5) = 1.8e-21
Identities = 38/97 (39%), Positives = 53/97 (54%)
Query: 448 LKLLILPMHGSLPNNEQIKVFRPTPRAMRKIVIATNIAETSITIPGIVYVIDPGFVKARW 507
L L +LP++ L +Q +VF+P P R V+ATN+AETS+TIPGI YV+D G VK R
Sbjct: 584 LPLHVLPLYSLLAPEKQAQVFQPPPEGTRLCVVATNVAETSLTIPGIKYVVDCGKVKKRH 643
Query: 508 FNPNTLTNSLVVVPISKXXXXXXXXXXXXXXXXHVYR 544
++ T +S V +S+ H YR
Sbjct: 644 YDRVTGVSSFRVTWVSQASADQRAGRAGRTEPGHCYR 680
Score = 160 (61.4 bits), Expect = 6.5e-14, Sum P(4) = 6.5e-14
Identities = 40/110 (36%), Positives = 57/110 (51%)
Query: 46 RLYTEASFSQLNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRVALELL 105
RLY+ A F + PPE+ R + +LQ+KAL I ++ F FP+PP + L A ELL
Sbjct: 680 RLYSSAVFGDFEKYPPPEITRRPVEDLILQMKALNIEKVINFPFPTPPSVEALIAAEELL 739
Query: 106 YSLGAMDV-----------NGNLTKPV---GETMAEMPLHPIHAKVLLSS 141
+LGA+ L+ P+ G TMA P+ P +AK+L S
Sbjct: 740 IALGALQAPPKTERVKQLQRSRLSCPITELGRTMATFPVAPRYAKMLALS 789
Score = 106 (42.4 bits), Expect = 1.8e-21, Sum P(5) = 1.8e-21
Identities = 26/99 (26%), Positives = 49/99 (49%)
Query: 343 LKPLKRTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYYSN-DPVVNY 401
L+ + LKL+I SAT+ E+ Q + ++ V+ +PV+V+++ P+ +Y
Sbjct: 392 LREKRHLPLKLLIMSATLRVEDFTQNQRLFTQP-PPVIKVESRQFPVTVHFNKRTPLEDY 450
Query: 402 VQGVVDTAIKIHESMPVGDILAFVIGLEQIEHIIGILKQ 440
KIH +P G IL F+ G ++ + L++
Sbjct: 451 SGECFRKVCKIHRMLPAGGILVFLTGQAEVHALCRRLRR 489
Score = 96 (38.9 bits), Expect = 1.8e-21, Sum P(5) = 1.8e-21
Identities = 16/38 (42%), Positives = 29/38 (76%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILM 38
MT+G+L++ D + KY V+++D+ HER+++TDIL+
Sbjct: 346 MTDGVLLKEIQKDFLLLKYKVVIIDEAHERSVYTDILI 383
Score = 56 (24.8 bits), Expect = 1.8e-21, Sum P(5) = 1.8e-21
Identities = 32/139 (23%), Positives = 58/139 (41%)
Query: 655 LMREMMTDPLLRKYS-VIMLDEVHERTIFTDILMGLL--KKILKDKERDFECSDEIASIL 711
L R M T P+ +Y+ ++ L H +T ++ + +++ ++ +R +E+A +
Sbjct: 769 LGRTMATFPVAPRYAKMLALSRQHGCLPYTITIVAAMTVRELFEELDRPAASDEELARLK 828
Query: 712 S----LLQVQDIFIKPSSGALSLKARVLRRNFEVEQGDLLTLLNIFKFYEKQENKKQFCH 767
+ Q++ I+ GA SLK GDL+ LL E QFC
Sbjct: 829 GKRARVAQMKRIWA--GQGA-SLKL-----------GDLMVLLGAVGACEYAGCSPQFCE 874
Query: 768 KYFFNYKVLKRAAELKNQM 786
YK + L+ Q+
Sbjct: 875 ANGLRYKAMMEIRRLRGQL 893
Score = 52 (23.4 bits), Expect = 1.8e-21, Sum P(5) = 1.8e-21
Identities = 9/23 (39%), Positives = 16/23 (69%)
Query: 824 YSGVYRTVRGNEDLYIHPSSVLY 846
+ Y+T ++ ++IHPSSVL+
Sbjct: 949 WKNAYKTPLLDDPVFIHPSSVLF 971
Score = 42 (19.8 bits), Expect = 3.7e-19, Sum P(3) = 3.7e-19
Identities = 14/47 (29%), Positives = 22/47 (46%)
Query: 90 PSPPPAQNLRVALELLYSLGAMDVNGNLTKPVGETMAEMPLHPIHAK 136
P PPP +R+ LE +L +D + L P G+ + P+ K
Sbjct: 25 PEPPP---VRLELEDKDTLKGVDASNALVLP-GKKKKKTKAPPLSKK 67
Score = 41 (19.5 bits), Expect = 6.6e-19, Sum P(4) = 6.6e-19
Identities = 23/96 (23%), Positives = 40/96 (41%)
Query: 591 EAGWCYDTKLIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTKIKYM 650
EAG D K+ P VT L V+ LG + ++ +D +D K Y
Sbjct: 903 EAGLFVDPKM---QPPNEDQVTYLRQIVT----AGLGDHLARKVQSEDLV-DDKWKNAYK 954
Query: 651 TEGILMREMMTDPLLRKYSVIMLDEVHERTIFTDIL 686
T ++ DP+ S ++ E+ E ++ +I+
Sbjct: 955 TP------LLDDPVFIHPSSVLFKELPEFVVYQEIV 984
>WB|WBGene00015525 [details] [associations]
symbol:rha-2 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0008340 "determination
of adult lifespan" evidence=IMP] [GO:0016246 "RNA interference"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] [GO:0071688 "striated muscle myosin thick filament
assembly" evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008340 GO:GO:0009792
GO:GO:0006898 GO:GO:0040007 GO:GO:0040010 GO:GO:0002119
GO:GO:0016246 GO:GO:0071688 GO:GO:0000003 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074985 HOGENOM:HOG000201240 KO:K14780
OMA:AKLQPRT EMBL:FO080280 PIR:H88533 RefSeq:NP_498895.1
UniGene:Cel.10874 ProteinModelPortal:P34305 SMR:P34305
IntAct:P34305 STRING:P34305 PaxDb:P34305 EnsemblMetazoa:C06E1.10
GeneID:176207 KEGG:cel:CELE_C06E1.10 UCSC:C06E1.10 CTD:176207
WormBase:C06E1.10 InParanoid:P34305 NextBio:891582 Uniprot:P34305
Length = 1148
Score = 259 (96.2 bits), Expect = 1.5e-17, Sum P(3) = 1.5e-17
Identities = 50/108 (46%), Positives = 78/108 (72%)
Query: 587 QYLLEAGWCYDTKLIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTK 646
Q+L EAG+ + +LIGITEPRR++ ++A RV EL V Y IR++ T + T
Sbjct: 271 QFLYEAGYASEGELIGITEPRRVAAIAMAQRVGVELAKP--DEVSYQIRYEG-TRSETTN 327
Query: 647 IKYMTEGILMREMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKIL 694
I +MT+G+LM+EM D +L+KYSVI++DE HER++++D+L+G+L +I+
Sbjct: 328 ILFMTDGVLMKEMEQDVMLKKYSVILIDEAHERSMYSDVLIGMLSRIV 375
Score = 172 (65.6 bits), Expect = 2.1e-21, Sum P(5) = 2.1e-21
Identities = 44/122 (36%), Positives = 59/122 (48%)
Query: 450 LLILPMHGSLPNNEQIKVFRPTPRAMRKIVIATNIAETSITIPGIVYVIDPGFVKARWFN 509
L LP++ L +Q +VF TP MR VI+TN+AETS+TIPG+ YVID GF K R ++
Sbjct: 575 LYCLPLYSLLSMGKQRRVFDETPAGMRLCVISTNVAETSLTIPGVKYVIDGGFEKRRLYD 634
Query: 510 PNTLTNSLVVVPISKXXXXXXXXXXXXXXXXHVYRKNFMYNRLFIHFCVSRNIPTIPNDP 569
T + V IS+ H YR +Y+ V P I + P
Sbjct: 635 SITGVSRFAVCRISQASGDQRAGRAGRISAGHAYR---LYSSAVYQDFVKFADPEILSKP 691
Query: 570 KD 571
D
Sbjct: 692 AD 693
Score = 124 (48.7 bits), Expect = 2.3e-09, Sum P(4) = 2.3e-09
Identities = 35/100 (35%), Positives = 51/100 (51%)
Query: 46 RLYTEASFSQLNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRVALELL 105
RLY+ A + + PE+ VL LK++ I ++ F FPS P Q L A + L
Sbjct: 669 RLYSSAVYQDFVKFADPEILSKPADQLVLHLKSMNIVKVVNFPFPSAPDEQMLESAEKRL 728
Query: 106 YSLGAMDV---NGN----LTKPVGETMAEMPLHPIHAKVL 138
LGA+ NG +TK +G+T+A PL P +AK +
Sbjct: 729 CRLGALSESTKNGKTEARITK-LGKTLAVFPLAPSYAKFI 767
Score = 111 (44.1 bits), Expect = 2.1e-21, Sum P(5) = 2.1e-21
Identities = 25/90 (27%), Positives = 46/90 (51%)
Query: 351 LKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYYSNDPVVNYVQGVVDTAI 410
L+L+I SAT+ ++ + ++ V +PVSV++ +Y+
Sbjct: 385 LRLVIMSATLRLDDFTH-KKLFPLLTPKVIKVDARQFPVSVHFEKRTPDDYIASAFRKTC 443
Query: 411 KIHESMPVGDILAFVIGLEQIEHIIGILKQ 440
+IHE++P G IL FV G +++ +I LK+
Sbjct: 444 RIHETLPPGAILVFVTGQHEVKQLITKLKK 473
Score = 104 (41.7 bits), Expect = 2.1e-21, Sum P(5) = 2.1e-21
Identities = 16/38 (42%), Positives = 32/38 (84%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILM 38
MT+G+L++ + D ++KYSVI++D+ HER++++D+L+
Sbjct: 331 MTDGVLMKEMEQDVMLKKYSVILIDEAHERSMYSDVLI 368
Score = 49 (22.3 bits), Expect = 2.1e-21, Sum P(5) = 2.1e-21
Identities = 13/50 (26%), Positives = 23/50 (46%)
Query: 744 GDLLTLLNIFKFYEKQENKKQFCHKYFFNYKVLKRAAELKNQMILLLKKS 793
GDL L++ E+ + + C K K L A +L+ Q+ ++ S
Sbjct: 830 GDLKVLMHAASVAEQIKYNARECEKVGLRVKALVEARKLRQQLTNIVNAS 879
Score = 46 (21.3 bits), Expect = 5.9e-21, Sum P(4) = 5.9e-21
Identities = 29/122 (23%), Positives = 60/122 (49%)
Query: 565 IPNDPKDVKCDVMFHKVFFSFFQYLLEAGWCYDTKLIGITEPRRISVTSLANRVSEELRT 624
+PN+ + V D+M ++ +F+ F LL+ G ++ KL T P+ ++ S + +L+
Sbjct: 1026 LPNENRSVPHDIMMYR-YFALF--LLD-GLVFE-KLKEYT-PKLLAPPSTMVKSWAKLQK 1079
Query: 625 TLGHTVGYTIRFDDCTTEDVTKIKYM-TEGILMREMMT---DPLLRKYSVIMLD-EVHER 679
+ I + TT K +++ E L+ E + + + ++ S++ E HE+
Sbjct: 1080 RTEMLLNKLIE-KEVTTRSSLKEQWLKNENWLLEEYLEWVPESVHQQISLMWPPLEDHEK 1138
Query: 680 TI 681
TI
Sbjct: 1139 TI 1140
Score = 43 (20.2 bits), Expect = 2.1e-21, Sum P(5) = 2.1e-21
Identities = 9/27 (33%), Positives = 16/27 (59%)
Query: 826 GVYRTVRGNEDLYIHPSSVLYTLQQPQ 852
G Y T ++I P SV++T ++P+
Sbjct: 931 GAYETTLIKGHVFIDPCSVVFT-EEPE 956
>POMBASE|SPAPB1A10.06c [details] [associations]
symbol:SPAPB1A10.06c "ATP-dependent RNA helicase Dhr1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=IEA] [GO:0003724 "RNA helicase activity"
evidence=ISO] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISM] [GO:0005524 "ATP binding" evidence=ISM] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0030490 "maturation of SSU-rRNA" evidence=ISO] [GO:0032040
"small-subunit processome" evidence=ISO] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 PomBase:SPAPB1A10.06c
GO:GO:0005524 EMBL:CU329670 GO:GO:0005730 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 GO:GO:0032040
GO:GO:0030490 HOGENOM:HOG000201240 KO:K14780 OMA:HQLKREE
OrthoDB:EOG4KM2B8 EMBL:AB027915 RefSeq:NP_593520.1
ProteinModelPortal:Q9HDY4 STRING:Q9HDY4
EnsemblFungi:SPAPB1A10.06c.1 GeneID:2543371 KEGG:spo:SPAPB1A10.06c
NextBio:20804386 Uniprot:Q9HDY4
Length = 1183
Score = 263 (97.6 bits), Expect = 2.5e-21, Sum P(2) = 2.5e-21
Identities = 60/132 (45%), Positives = 85/132 (64%)
Query: 587 QYLLEAGWCYDTK----LIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTE 642
Q+L EAG+ +I IT+PRR++ S+A RVSEEL T V Y IRFD
Sbjct: 433 QFLFEAGFSSPESENPGMIAITQPRRVAAVSIAKRVSEEL-TGFSSKVSYQIRFDSTINP 491
Query: 643 DVTKIKYMTEGILMREMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKILKDKERDFE 702
D T IK+MT+GIL+RE+ +D LL YS +++DE HER++ TDIL+GLL +I++ + R+
Sbjct: 492 D-TAIKFMTDGILLRELSSDFLLTAYSAVIVDEAHERSVNTDILLGLLSRIVRLR-REMS 549
Query: 703 CSDEIASILSLL 714
SD+ L L+
Sbjct: 550 KSDQKVKPLKLI 561
Score = 170 (64.9 bits), Expect = 2.5e-11, Sum P(2) = 2.5e-11
Identities = 42/95 (44%), Positives = 58/95 (61%)
Query: 46 RLYTEASF-SQLNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRVALEL 104
RLY+ A F S + PE+ RT + S VLQ+K + I NI F FP+ P L +L+L
Sbjct: 796 RLYSSAVFDSSFPLHSLPEILRTPVESIVLQMKNMNIDNIANFPFPTSPGRSRLEKSLKL 855
Query: 105 LYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLL 139
L +LGA+D G LTK +GE M+ PL P +K+L+
Sbjct: 856 LSNLGAIDSEGVLTK-LGEQMSLFPLSPRFSKMLI 889
Score = 165 (63.1 bits), Expect = 3.5e-19, Sum P(3) = 3.5e-19
Identities = 37/99 (37%), Positives = 49/99 (49%)
Query: 446 EDLKLLILPMHGSLPNNEQIKVFRPTPRAMRKIVIATNIAETSITIPGIVYVIDPGFVKA 505
E + +LP++ L +Q+KVF +P R ++ATN+AETSITIP I YV+D G K
Sbjct: 698 ESEPMYVLPLYSLLTTEDQMKVFDSSPEGHRMCIVATNVAETSITIPNIRYVVDCGKAKE 757
Query: 506 RWFNPNTLTNSLVVVPISKXXXXXXXXXXXXXXXXHVYR 544
R +N T V ISK H YR
Sbjct: 758 RVYNEKTSVQKFEVRWISKANADQRAGRAGRTGPGHCYR 796
Score = 129 (50.5 bits), Expect = 3.5e-19, Sum P(3) = 3.5e-19
Identities = 30/106 (28%), Positives = 56/106 (52%)
Query: 335 DMKAFAEQLKPLKRTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYYS 394
+M +++KPLK LII SAT+ + + + S I+ + YPVS++++
Sbjct: 547 EMSKSDQKVKPLK-----LIIMSATLRVTDFSE-NKLLFSVPPPIIKIDARQYPVSIHFN 600
Query: 395 NDPVVNYVQGVVDTAIKIHESMPVGDILAFVIGLEQIEHIIGILKQ 440
+Y+Q D IH+ +P G IL F+ G +++E + +L++
Sbjct: 601 RTTKPDYLQDAFDKVCLIHKRLPAGSILVFLTGQQEVEQLCQMLRK 646
Score = 105 (42.0 bits), Expect = 1.0e-16, Sum P(3) = 1.0e-16
Identities = 31/92 (33%), Positives = 48/92 (52%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILMECSRKFSRLYTEASFSQLNECT 60
MT+GIL+ D + YS +++D+ HER++ TDIL+ + RL E S S +
Sbjct: 498 MTDGILLRELSSDFLLTAYSAVIVDEAHERSVNTDILLGLLSRIVRLRREMSKSD-QKVK 556
Query: 61 PPEMQRTELSSAVLQLKALGIHNILRFSFPSP 92
P ++ + SA L++ N L FS P P
Sbjct: 557 PLKLI---IMSATLRVTDFS-ENKLLFSVPPP 584
Score = 78 (32.5 bits), Expect = 2.5e-21, Sum P(2) = 2.5e-21
Identities = 30/107 (28%), Positives = 49/107 (45%)
Query: 747 LTLLNIFKFYEKQENKKQFCHKYFFNYKVLKRAAELKNQMILLLK-------KSSIPLVT 799
L+LL+ Y+ +K++FC + + K L+ L+ Q+I LLK K L
Sbjct: 971 LSLLSAVCAYDYASDKRKFCKENYLREKALEEVTNLRKQIIGLLKRYMVRVEKEFFKLQL 1030
Query: 800 SPRNTNAVLKCLTNGFFSNAAYLHYSGVY-RTVRGNEDLYIHPSSVL 845
P T+ +K L F +AY+ +Y + RG L+ S V+
Sbjct: 1031 KPP-TSVQIKALRQ--FIASAYIDQVALYDKEKRGYVTLFPSGSEVV 1074
Score = 48 (22.0 bits), Expect = 3.1e-08, Sum P(2) = 3.1e-08
Identities = 15/40 (37%), Positives = 22/40 (55%)
Query: 432 EHIIGILKQY--HNQREDLKLLILPMHGSLPNNEQIKVFR 469
+ IIG+LK+Y ++E KL + P P + QIK R
Sbjct: 1008 KQIIGLLKRYMVRVEKEFFKLQLKP-----PTSVQIKALR 1042
Score = 44 (20.5 bits), Expect = 0.00028, Sum P(3) = 0.00028
Identities = 28/127 (22%), Positives = 54/127 (42%)
Query: 262 TVVEFLT-----EMGCRMDFEYISRGYMFRKGRMKILVSKIFKMSQGKPSDSGVEPISQS 316
+++ FLT E C+M + R + K R +I+VS+ + + S E I Q
Sbjct: 626 SILVFLTGQQEVEQLCQMLRKRFVRSFRPLKSRARIVVSRKTMSVENEDLQSETEDIDQ- 684
Query: 317 YLVELSILAPGGQDVIGEDMKAFAEQLKPLKRTQLKLIISSATVDAEEICQFYNISASSN 376
V S + D E M + L L T+ ++ + ++ + +C A ++
Sbjct: 685 --VPTSSSSSVTYDDESEPM--YVLPLYSLLTTEDQMKVFDSSPEGHRMCIVATNVAETS 740
Query: 377 ATILSVK 383
TI +++
Sbjct: 741 ITIPNIR 747
Score = 37 (18.1 bits), Expect = 4.8e-17, Sum P(2) = 4.8e-17
Identities = 16/70 (22%), Positives = 33/70 (47%)
Query: 703 CSDEIASILSLLQVQDIFIKPSSGALSLKARVLRRNFEVEQGDLLTLLNIFKFYEKQENK 762
C + +++S L + +F+ S L A +N E+ DL+ + + +K+E K
Sbjct: 896 CLPYVIALVSALSINQLFVSKQS--LLYDAH--DKNSRSEETDLI---DDDEIKQKEEYK 948
Query: 763 KQFCHKYFFN 772
+ + +FN
Sbjct: 949 NRM--RGYFN 956
>RGD|1308767 [details] [associations]
symbol:Dhx36 "DEAH (Asp-Glu-Ala-His) box polypeptide 36"
species:10116 "Rattus norvegicus" [GO:0003725 "double-stranded RNA
binding" evidence=IEA;ISO] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0009615 "response to virus" evidence=IEA;ISO]
[GO:0043330 "response to exogenous dsRNA" evidence=IEA;ISO]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1308767 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0009615
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 GO:GO:0043330
GeneTree:ENSGT00550000074257 CTD:170506 KO:K14442 OMA:RIRNRSY
OrthoDB:EOG4K6G3J EMBL:CH474003 IPI:IPI00367998
RefSeq:NP_001101148.1 UniGene:Rn.2744 Ensembl:ENSRNOT00000019824
GeneID:310461 KEGG:rno:310461 UCSC:RGD:1308767 NextBio:662035
Uniprot:D4A2Z8
Length = 1000
Score = 203 (76.5 bits), Expect = 2.9e-21, Sum P(4) = 2.9e-21
Identities = 53/156 (33%), Positives = 75/156 (48%)
Query: 419 GDILAFVIGLEQIEHIIGILKQYHNQREDLKLLILPMHGSLPNNEQIKVFRPTPRAMRKI 478
G IL F+ G + I + +L + D + LI+P+H +P Q +VF+ TP +RKI
Sbjct: 481 GAILVFLPGWDNISTLHDLLMSQVMFKSD-RFLIIPLHSLMPTVNQTQVFKKTPPGVRKI 539
Query: 479 VIATNIAETSITIPGIVYVIDPGFVKARWFNPNTLTNSLVVVPISKXXXXXXXXXXXXXX 538
VIATNIAETSITI +VYVID G +K F+ +++ +SK
Sbjct: 540 VIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRKGRAGRVQ 599
Query: 539 XXHVYRKNFMYNRLFIHFCVSRNIPTIPNDPKDVKC 574
H Y +YN L +P I P + C
Sbjct: 600 PGHCYH---LYNGLRASLLDDYQLPEILRTPLEELC 632
Score = 161 (61.7 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 36/93 (38%), Positives = 55/93 (59%)
Query: 604 TEPRRISVTSLANRVSEELRTTLGH--TVGYTIRFDDCTTEDVTKIKYMTEGILMREMMT 661
T+PRRIS S+A RV+ E + G+ + GY IR I Y T GI+++ + +
Sbjct: 254 TQPRRISAISVAERVAAERAESCGNGNSTGYQIRLQSRLPRKQGSILYCTTGIILQWLQS 313
Query: 662 DPLLRKYSVIMLDEVHERTIFTDILMGLLKKIL 694
D L S I+LDE+HER + +D+LM ++K +L
Sbjct: 314 DSRLSSVSHIVLDEIHERNLQSDVLMTVIKDLL 346
Score = 105 (42.0 bits), Expect = 3.4e-08, Sum P(3) = 3.4e-08
Identities = 30/95 (31%), Positives = 48/95 (50%)
Query: 47 LYTEASFSQLNECTPPEMQRTELSSAVLQLKALGIHNILRF--SFPSPPPAQNLRVALEL 104
LY S L++ PE+ RT L LQ+K L + I F PP + + ++++
Sbjct: 606 LYNGLRASLLDDYQLPEILRTPLEELCLQIKILRLGGIAYFLSRLMDPPSDEAVVLSIKH 665
Query: 105 LYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLL 139
L L A+D LT P+G +A +P+ P K++L
Sbjct: 666 LMELSALDKQEELT-PLGVHLARLPVEPHIGKMIL 699
Score = 88 (36.0 bits), Expect = 2.9e-21, Sum P(4) = 2.9e-21
Identities = 29/112 (25%), Positives = 51/112 (45%)
Query: 701 FECSDEIASILSLLQVQDIFIKPSSGALSLKARVLRRNFEVE-QGDLLTLLNIFKFYEKQ 759
F C D + +I + L +D F+ P AR R+ E + D LT++N F+ +E+
Sbjct: 704 FCCLDPVLTIAASLSFKDPFVIPLGKEKIADAR--RKELAKETRSDHLTVVNAFEGWEEA 761
Query: 760 ENK-----KQFCHKYFFNYKVLKRAAELKNQMILLLKKSSIPLVTSPRNTNA 806
+ + K +C +YF + L+ +K Q L + SP++ A
Sbjct: 762 KRRGFRYEKDYCWEYFLSSNTLQMLHNMKGQFAEHLLGAGFVSSRSPKDPKA 813
Score = 71 (30.1 bits), Expect = 2.9e-21, Sum P(4) = 2.9e-21
Identities = 14/37 (37%), Positives = 24/37 (64%)
Query: 2 TEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILM 38
T GI+++ D + S I+LD++HER + +D+LM
Sbjct: 303 TTGIILQWLQSDSRLSSVSHIVLDEIHERNLQSDVLM 339
Score = 69 (29.3 bits), Expect = 2.9e-21, Sum P(4) = 2.9e-21
Identities = 15/49 (30%), Positives = 28/49 (57%)
Query: 348 RTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYYSND 396
R+ LK+I+ SAT++AE+ +++ N ++ + G +PV Y D
Sbjct: 349 RSDLKVILMSATLNAEKFSEYFG-----NCPMIHIPGFTFPVVEYLLED 392
>FB|FBgn0001330 [details] [associations]
symbol:kz "kurz" species:7227 "Drosophila melanogaster"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS;NAS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0004386 "helicase activity"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0022008 "neurogenesis"
evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0022008 EMBL:AE014298
GO:GO:0003723 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AL009195 GeneTree:ENSGT00550000074985 KO:K14780
OMA:AKLQPRT EMBL:X64418 PIR:T13424 RefSeq:NP_476591.1 UniGene:Dm.33
ProteinModelPortal:O46072 SMR:O46072 STRING:O46072 PaxDb:O46072
PRIDE:O46072 EnsemblMetazoa:FBtr0070419 GeneID:31205
KEGG:dme:Dmel_CG3228 UCSC:CG3228-RA CTD:31205 FlyBase:FBgn0001330
InParanoid:O46072 OrthoDB:EOG4SN03P PhylomeDB:O46072
GenomeRNAi:31205 NextBio:772445 Bgee:O46072 GermOnline:CG3228
Uniprot:O46072
Length = 1192
Score = 264 (98.0 bits), Expect = 9.4e-19, P = 9.4e-19
Identities = 53/108 (49%), Positives = 79/108 (73%)
Query: 587 QYLLEAGWCYDTKLIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTK 646
Q+L EAG+ K+IG+TEPRR++ +++ RV+ E+ V Y IRF+ T T+
Sbjct: 295 QFLYEAGYAQH-KMIGVTEPRRVAAIAMSKRVAHEMNLPESE-VSYLIRFEGNVTP-ATR 351
Query: 647 IKYMTEGILMREMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKIL 694
IK+MT+G+L++E+ TD LL KYSVI+LDE HER+++TDIL+GLL +I+
Sbjct: 352 IKFMTDGVLLKEIETDFLLSKYSVIILDEAHERSVYTDILVGLLSRIV 399
Score = 164 (62.8 bits), Expect = 8.2e-21, Sum P(3) = 8.2e-21
Identities = 38/109 (34%), Positives = 56/109 (51%)
Query: 450 LLILPMHGSLPNNEQIKVFRPTPRAMRKIVIATNIAETSITIPGIVYVIDPGFVKARWFN 509
L +LP++ L + +Q ++F P P R V++TN+AETS+TIP I YV+D G K R ++
Sbjct: 617 LWVLPLYSLLSSEKQNRIFLPVPDGCRLCVVSTNVAETSLTIPHIKYVVDCGRQKTRLYD 676
Query: 510 PNTLTNSLVVVPISKXXXXXXXXXXXXXXXXHVYR--KNFMYNRLFIHF 556
T ++ VV SK H YR + +YN F F
Sbjct: 677 KLTGVSAFVVTYTSKASADQRAGRAGRISAGHCYRLYSSAVYNDCFEDF 725
Score = 127 (49.8 bits), Expect = 9.3e-10, Sum P(2) = 9.3e-10
Identities = 32/104 (30%), Positives = 55/104 (52%)
Query: 46 RLYTEASFSQ-LNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRVALEL 104
RLY+ A ++ + + P++Q+ + +LQ++ +GI ++ F FPSPP L+ A
Sbjct: 711 RLYSSAVYNDCFEDFSQPDIQKKPVEDLMLQMRCMGIDRVVHFPFPSPPDQVQLQAAERR 770
Query: 105 LYSLGAMDV----NGNLTKPV---GETMAEMPLHPIHAKVLLSS 141
L LGA++V N +L V G ++ P+ P K+L S
Sbjct: 771 LIVLGALEVAKTENTDLPPAVTRLGHVISRFPVAPRFGKMLALS 814
Score = 117 (46.2 bits), Expect = 8.2e-21, Sum P(3) = 8.2e-21
Identities = 32/108 (29%), Positives = 56/108 (51%)
Query: 342 QLKPL--KRTQ-LKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYYSNDPV 398
++ PL KR Q LKLII SAT+ + + + +L V+ +PV++++
Sbjct: 397 RIVPLRHKRGQPLKLIIMSATLRVSDFTENTRLFKIP-PPLLKVEARQFPVTIHFQKRTP 455
Query: 399 VNYVQGVVDTAIKIHESMPVGDILAFVIGLEQIEHIIGILKQ---YHN 443
+YV +KIH +P G IL FV G +++ ++ L++ YH+
Sbjct: 456 DDYVAEAYRKTLKIHNKLPEGGILIFVTGQQEVNQLVRKLRRTFPYHH 503
Score = 107 (42.7 bits), Expect = 8.2e-21, Sum P(3) = 8.2e-21
Identities = 19/38 (50%), Positives = 31/38 (81%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILM 38
MT+G+L++ + D + KYSVI+LD+ HER+++TDIL+
Sbjct: 355 MTDGVLLKEIETDFLLSKYSVIILDEAHERSVYTDILV 392
>TAIR|locus:2007003 [details] [associations]
symbol:FAS4 "FASCIATED STEM 4" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
EMBL:CP002684 GO:GO:0005524 GO:GO:0003676 EMBL:AC051630
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000201240 KO:K14780
IPI:IPI00531863 PIR:E86457 RefSeq:NP_174605.1 UniGene:At.39951
ProteinModelPortal:Q9C813 SMR:Q9C813 STRING:Q9C813 PRIDE:Q9C813
EnsemblPlants:AT1G33390.1 GeneID:840232 KEGG:ath:AT1G33390
TAIR:At1g33390 InParanoid:Q9C813 OMA:EVQWISK PhylomeDB:Q9C813
ProtClustDB:CLSN2693169 Genevestigator:Q9C813 Uniprot:Q9C813
Length = 1237
Score = 268 (99.4 bits), Expect = 9.2e-21, Sum P(2) = 9.2e-21
Identities = 56/121 (46%), Positives = 88/121 (72%)
Query: 587 QYLLEAGWC---YDTK--LIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTT 641
Q+L EAG+ + ++ +IGIT+PRR++V + A RV+ EL LG VG+ +R+D
Sbjct: 276 QFLYEAGFGSKQFSSRSGIIGITQPRRVAVLATAKRVAFELGVRLGKEVGFQVRYDKKIG 335
Query: 642 EDVTKIKYMTEGILMREMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKILKDKERDF 701
E+ + IK+MT+GIL+RE+ D LLR+YSVI+LDE HER++ TDIL+G+L +++K ++ +
Sbjct: 336 EN-SSIKFMTDGILLREIQNDFLLRRYSVIILDEAHERSLNTDILIGMLTRVIKIRQEYY 394
Query: 702 E 702
E
Sbjct: 395 E 395
Score = 171 (65.3 bits), Expect = 2.7e-17, Sum P(3) = 2.7e-17
Identities = 44/134 (32%), Positives = 67/134 (50%)
Query: 439 KQYHNQREDLKLLILPMHGSLPNNEQIKVFRPTPRAMRKIVIATNIAETSITIPGIVYVI 498
+Q N+ KL +LP++ L Q++VF + R +V+ATN+AETS+TIPGI YV+
Sbjct: 636 EQVKNKFSPGKLRVLPLYAMLSPAAQLRVFEEVEKEERLVVVATNVAETSLTIPGIKYVV 695
Query: 499 DPGFVKARWFNPNTLTNSLVVVPISKXXXXXXXXXXXXXXXXHVYRKNFMYNR-LFIHFC 557
D G VK + ++ T S V IS+ H YR +Y+ +F +
Sbjct: 696 DTGRVKVKNYDSKTGMESYEVDWISQASASQRAGRAGRTGPGHCYR---LYSSAVFSNIF 752
Query: 558 VSRNIPTIPNDPKD 571
++P I P D
Sbjct: 753 EESSLPEIMKVPVD 766
Score = 170 (64.9 bits), Expect = 3.0e-10, Sum P(2) = 3.0e-10
Identities = 35/96 (36%), Positives = 58/96 (60%)
Query: 46 RLYTEASFSQL-NECTPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRVALEL 104
RLY+ A FS + E + PE+ + + +L +K++ I + F FP+PP +R A
Sbjct: 741 RLYSSAVFSNIFEESSLPEIMKVPVDGVILLMKSMNIPKVENFPFPTPPEPSAIREAERC 800
Query: 105 LYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLLS 140
L +L A+D NG LT P+G+ M+ P+ P H+++LL+
Sbjct: 801 LKALEALDSNGGLT-PLGKAMSHYPMSPRHSRMLLT 835
Score = 115 (45.5 bits), Expect = 2.7e-17, Sum P(3) = 2.7e-17
Identities = 26/93 (27%), Positives = 50/93 (53%)
Query: 349 TQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYYSNDP-VVNYVQGVVD 407
T LKLI+ SAT+ E+ + + ++ V YPV++++S +V+Y+
Sbjct: 414 TPLKLILMSATLRVEDFVSGKRLFPNI-PPLIEVPTRQYPVTIHFSKKTEIVDYIGEAYK 472
Query: 408 TAIKIHESMPVGDILAFVIGLEQIEHIIGILKQ 440
+ IH+ +P G IL FV G +++++ L++
Sbjct: 473 KVMSIHKKLPQGGILVFVTGQREVDYLCEKLRK 505
Score = 106 (42.4 bits), Expect = 2.2e-16, Sum P(3) = 2.2e-16
Identities = 33/101 (32%), Positives = 52/101 (51%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILMECSRKFSRL----YTEASFS-Q 55
MT+GIL+ +D + +YSVI+LD+ HER++ TDIL+ + ++ Y E S Q
Sbjct: 343 MTDGILLREIQNDFLLRRYSVIILDEAHERSLNTDILIGMLTRVIKIRQEYYEEQQKSLQ 402
Query: 56 LNECTPPEMQRTELSSAVLQLKALGIHNIL--RFSFPSPPP 94
E Q T L +L L + + + + FP+ PP
Sbjct: 403 SGGTVTSECQITPLK-LILMSATLRVEDFVSGKRLFPNIPP 442
Score = 68 (29.0 bits), Expect = 9.2e-21, Sum P(2) = 9.2e-21
Identities = 16/60 (26%), Positives = 27/60 (45%)
Query: 731 KARVLRRNFEVEQGDLLTLLNIFKFYEKQENKKQFCHKYFFNYKVLKRAAELKNQMILLL 790
K + R F D LT+ +E EN FC + K + ++LK+Q++ L+
Sbjct: 902 KIKAARDRFSNPSSDALTVAYALHSFEVSENGMGFCEANGLHLKTMDEMSKLKDQLLRLV 961
>UNIPROTKB|B0V0F7 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR002464 PROSITE:PS00690
GO:GO:0005524 GO:GO:0003676 eggNOG:COG1643 GO:GO:0008026
HGNC:HGNC:2739 EMBL:CR759873 IPI:IPI00894447 SMR:B0V0F7
Ensembl:ENST00000456005 UCSC:uc011elj.1 Uniprot:B0V0F7
Length = 188
Score = 212 (79.7 bits), Expect = 1.4e-20, Sum P(2) = 1.4e-20
Identities = 42/132 (31%), Positives = 80/132 (60%)
Query: 348 RTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYYSNDPVVNYVQGVVD 407
R +LK++++SAT+D F++ +A + + G +PV ++Y+ P +Y++ V
Sbjct: 62 RPELKVLVASATMDTARFSTFFD-----DAPVFRIPGRRFPVDIFYTKAPEADYLEACVV 116
Query: 408 TAIKIHESMPVGDILAFVIGLEQIEHIIGILKQYHNQ--REDLKLLILPMHGSLPNNEQI 465
+ ++IH + P GDIL F+ G E+IE +L+ + + +LL+LP++ +LP++ Q
Sbjct: 117 SVLQIHVTQPPGDILVFLTGQEEIEAACEMLQDRCRRLGSKIRELLVLPIYANLPSDMQA 176
Query: 466 KVFRPTPRAMRK 477
++F+PTP RK
Sbjct: 177 RIFQPTPPGARK 188
Score = 68 (29.0 bits), Expect = 1.4e-20, Sum P(2) = 1.4e-20
Identities = 14/36 (38%), Positives = 21/36 (58%)
Query: 15 SVEKYSVIMLDKVHERTIFTDILMECSRKFSRLYTE 50
S + V+M+D+ HERT+ TDIL + +R E
Sbjct: 29 SPSQLGVVMVDEAHERTLHTDILFGLIKDVARFRPE 64
>UNIPROTKB|F6V8H1 [details] [associations]
symbol:DHX36 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 OMA:RIRNRSY Ensembl:ENSCAFT00000013769
EMBL:AAEX03013695 Uniprot:F6V8H1
Length = 1122
Score = 203 (76.5 bits), Expect = 2.7e-20, Sum P(4) = 2.7e-20
Identities = 53/156 (33%), Positives = 75/156 (48%)
Query: 419 GDILAFVIGLEQIEHIIGILKQYHNQREDLKLLILPMHGSLPNNEQIKVFRPTPRAMRKI 478
G IL F+ G + I + +L + D + LI+P+H +P Q +VF+ TP +RKI
Sbjct: 603 GAILVFLPGWDNISTLHDLLMSQVMFKSD-RFLIIPLHSLMPTVNQTQVFKKTPPGVRKI 661
Query: 479 VIATNIAETSITIPGIVYVIDPGFVKARWFNPNTLTNSLVVVPISKXXXXXXXXXXXXXX 538
VIATNIAETSITI +VYVID G +K F+ +++ +SK
Sbjct: 662 VIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRKGRAGRVQ 721
Query: 539 XXHVYRKNFMYNRLFIHFCVSRNIPTIPNDPKDVKC 574
H Y +YN L +P I P + C
Sbjct: 722 PGHCYH---LYNGLRASLLDDYQLPEILRTPLEELC 754
Score = 160 (61.4 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 36/93 (38%), Positives = 55/93 (59%)
Query: 604 TEPRRISVTSLANRVSEELRTTLGH--TVGYTIRFDDCTTEDVTKIKYMTEGILMREMMT 661
T+PRRIS S+A RV+ E + G+ + GY IR I Y T GI+++ + +
Sbjct: 376 TQPRRISAISVAERVAAERAESCGNGNSTGYQIRLQSRLPRKQGSILYCTTGIILQWLQS 435
Query: 662 DPLLRKYSVIMLDEVHERTIFTDILMGLLKKIL 694
D L S I+LDE+HER + +D+LM ++K +L
Sbjct: 436 DSHLSSVSHIVLDEIHERNLQSDVLMTVIKDLL 468
Score = 107 (42.7 bits), Expect = 1.9e-07, Sum P(3) = 1.9e-07
Identities = 30/95 (31%), Positives = 48/95 (50%)
Query: 47 LYTEASFSQLNECTPPEMQRTELSSAVLQLKALGIHNILRF--SFPSPPPAQNLRVALEL 104
LY S L++ PE+ RT L LQ+K L + I F PP + + ++++
Sbjct: 728 LYNGLRASLLDDYQLPEILRTPLEELCLQIKILRLGGIAYFLSRLMDPPSDEAVSLSIKH 787
Query: 105 LYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLL 139
L L A+D LT P+G +A +P+ P K++L
Sbjct: 788 LMELNALDKQEELT-PLGVHLARLPVEPHIGKMIL 821
Score = 80 (33.2 bits), Expect = 2.7e-20, Sum P(4) = 2.7e-20
Identities = 24/91 (26%), Positives = 43/91 (47%)
Query: 701 FECSDEIASILSLLQVQDIFIKPSSGALSLKARVLRRNFEVE-QGDLLTLLNIFKFYEKQ 759
F C D + +I + L +D F+ P AR R+ + + D LT++N F+ +E+
Sbjct: 826 FCCLDPVLTIAASLSFKDPFVIPLGKEKIADAR--RKELAKDTKSDHLTVVNAFEGWEEA 883
Query: 760 ENK-----KQFCHKYFFNYKVLKRAAELKNQ 785
+ K +C +YF + L+ +K Q
Sbjct: 884 RRRGFRYEKDYCWEYFLSSNTLQMLHNMKGQ 914
Score = 71 (30.1 bits), Expect = 2.7e-20, Sum P(4) = 2.7e-20
Identities = 14/37 (37%), Positives = 24/37 (64%)
Query: 2 TEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILM 38
T GI+++ D + S I+LD++HER + +D+LM
Sbjct: 425 TTGIILQWLQSDSHLSSVSHIVLDEIHERNLQSDVLM 461
Score = 70 (29.7 bits), Expect = 2.7e-20, Sum P(4) = 2.7e-20
Identities = 17/57 (29%), Positives = 31/57 (54%)
Query: 348 RTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYYSNDPV--VNYV 402
R LK+I+ SAT++AE+ +++ N ++ + G +PV Y D + + YV
Sbjct: 471 RPDLKVILMSATLNAEKFSEYFG-----NCPMIHIPGFTFPVVEYLLEDIIEKIRYV 522
>WB|WBGene00022433 [details] [associations]
symbol:Y108F1.5 species:6239 "Caenorhabditis elegans"
[GO:0004386 "helicase activity" evidence=IEA] InterPro:IPR000210
InterPro:IPR007502 InterPro:IPR013069 Pfam:PF00651 Pfam:PF04408
SMART:SM00225 SMART:SM00847 Gene3D:3.30.710.10 InterPro:IPR011333
SUPFAM:SSF54695 GO:GO:0004386 eggNOG:COG1643 EMBL:FO080095
GeneTree:ENSGT00390000016595 RefSeq:NP_872264.1 UniGene:Cel.28964
ProteinModelPortal:Q8MXK2 SMR:Q8MXK2 STRING:Q8MXK2
EnsemblMetazoa:Y108F1.5 GeneID:353490 KEGG:cel:CELE_Y108F1.5
UCSC:Y108F1.5 CTD:353490 WormBase:Y108F1.5 InParanoid:Q8MXK2
NextBio:953851 Uniprot:Q8MXK2
Length = 330
Score = 193 (73.0 bits), Expect = 2.8e-20, Sum P(2) = 2.8e-20
Identities = 41/105 (39%), Positives = 69/105 (65%)
Query: 697 KERDFECSDEIASILSLLQVQDIFIKPSSGALSLKARVLRRNFEVEQGDLLTLLNIF-KF 755
K +F C E+ +I++++Q+QD+FI P +A V+R+ F VE+G+ +T+LN+F KF
Sbjct: 43 KSAEFGCFTEMVTIVAMMQIQDVFITPYRQRH--QADVIRKKFAVEEGNHITMLNVFTKF 100
Query: 756 YEKQENKKQFCHKYFFNYKVLKRAAELKNQMILLLKKSSIPLVTS 800
E +KK +C +F NY+ L RA +++Q++ LLK+ I V+S
Sbjct: 101 VENGRSKK-WCSDHFVNYRGLMRADNVRSQLVRLLKRFEIEKVSS 144
Score = 119 (46.9 bits), Expect = 2.8e-20, Sum P(2) = 2.8e-20
Identities = 24/40 (60%), Positives = 29/40 (72%)
Query: 102 LELLYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLLSS 141
LELLY+LGA+D LT P+G MAE PL P+H+K LL S
Sbjct: 5 LELLYALGAIDETSQLTSPLGLQMAEFPLPPMHSKCLLKS 44
>DICTYBASE|DDB_G0287351 [details] [associations]
symbol:dhx37 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=ISS] [GO:0005732 "small nucleolar ribonucleoprotein
complex" evidence=ISS] [GO:0005730 "nucleolus" evidence=ISS]
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 dictyBase:DDB_G0287351
GO:GO:0005524 GO:GO:0005730 GenomeReviews:CM000154_GR GO:GO:0003676
GO:GO:0042254 EMBL:AAFI02000100 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GO:GO:0003724 KO:K14780 GO:GO:0005732
RefSeq:XP_637255.1 STRING:Q54KG8 EnsemblProtists:DDB0235265
GeneID:8626085 KEGG:ddi:DDB_G0287351 InParanoid:Q54KG8 OMA:HERNLNT
Uniprot:Q54KG8
Length = 1461
Score = 272 (100.8 bits), Expect = 3.6e-20, Sum P(2) = 3.6e-20
Identities = 56/113 (49%), Positives = 77/113 (68%)
Query: 587 QYLLEAGWCYDTK-----LIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTT 641
Q+L E+G+ + +IG+T+PRR++ S A RV+EEL G VGY IR+D
Sbjct: 440 QFLYESGFGHRESGDFPGIIGVTQPRRVAAVSTAKRVAEELNVEFGKEVGYQIRYDKKLD 499
Query: 642 EDVTKIKYMTEGILMREMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKIL 694
V KIK+MT+GILMRE+ TD LL +YS I++DE HER + TDIL+GLL +I+
Sbjct: 500 SSVNKIKFMTDGILMREVQTDFLLSQYSSILIDEAHERNLNTDILIGLLSRIV 552
Score = 186 (70.5 bits), Expect = 2.9e-19, Sum P(3) = 2.9e-19
Identities = 44/121 (36%), Positives = 65/121 (53%)
Query: 450 LLILPMHGSLPNNEQIKVFRPTPRAMRKIVIATNIAETSITIPGIVYVIDPGFVKARWFN 509
L +LP++ +LP ++Q++VF+ P R +V+ATN+AETS+TIP I YV+D G VK R++N
Sbjct: 846 LFVLPLYSTLPTSKQMRVFQTPPLGSRLVVVATNLAETSLTIPNIKYVVDTGRVKQRYYN 905
Query: 510 PNTLTNSLVVVPISKXXXXXXXXXXXXXXXXHVYR--KNFMYNRLFIHFCVSRNIPTIPN 567
+ +S V SK H YR + ++N F F I IP
Sbjct: 906 KDNGISSFEVGWTSKASADQRAGRAGRTGPGHCYRIYSSAVFNDHFQQFS-KPEILMIPI 964
Query: 568 D 568
D
Sbjct: 965 D 965
Score = 165 (63.1 bits), Expect = 9.9e-09, Sum P(2) = 9.9e-09
Identities = 33/95 (34%), Positives = 57/95 (60%)
Query: 46 RLYTEASFSQ-LNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRVALEL 104
R+Y+ A F+ + + PE+ + +LQ+K++GI I F FP+PP +L++AL
Sbjct: 940 RIYSSAVFNDHFQQFSKPEILMIPIDGMILQMKSMGIQKITGFPFPTPPDESSLKLALRT 999
Query: 105 LYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLL 139
L +LGA++V +G M++ P+ P H+K+LL
Sbjct: 1000 LINLGALEVKTFSITELGMKMSQFPVSPRHSKMLL 1034
Score = 129 (50.5 bits), Expect = 2.9e-19, Sum P(3) = 2.9e-19
Identities = 26/91 (28%), Positives = 54/91 (59%)
Query: 351 LKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYYSNDP-VVNYVQGVVDTA 409
LKL++ SAT+ E+ + + S ++++ +PV+++++ +VNY+
Sbjct: 580 LKLVVMSATLRVEDFTKNKTLF-SRPPPVINIPTRQFPVTIHFNKKTELVNYIDECYKKV 638
Query: 410 IKIHESMPVGDILAFVIGLEQIEHIIGILKQ 440
+KIH+++P G IL FV G ++IE++ L++
Sbjct: 639 VKIHKNLPSGGILVFVTGKQEIEYLCSKLRR 669
Score = 89 (36.4 bits), Expect = 3.6e-15, Sum P(3) = 3.6e-15
Identities = 30/106 (28%), Positives = 54/106 (50%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILMECSRKF----SRLYTEA-SFSQ 55
MT+GIL+ D + +YS I++D+ HER + TDIL+ + +LY ++ + ++
Sbjct: 508 MTDGILMREVQTDFLLSQYSSILIDEAHERNLNTDILIGLLSRIVPLRKKLYLKSLATNK 567
Query: 56 LNECTPPEM---QRTELSSAVLQLKALGIHNILRFSFPSPPPAQNL 98
N +M + + SA L+++ + L F PPP N+
Sbjct: 568 ANGTIGVDMIYPLKLVVMSATLRVEDFTKNKTL---FSRPPPVINI 610
Score = 60 (26.2 bits), Expect = 3.6e-20, Sum P(2) = 3.6e-20
Identities = 27/107 (25%), Positives = 47/107 (43%)
Query: 690 LKKILKDKERDFECSD--EIASILSLLQVQDIFIKPSSGALSLKARVLR---RNFEVEQG 744
LK+ + + + E D E I S Q + FI+ + LR R + ++
Sbjct: 1059 LKEAYEANQNNDENDDNNEKQQIDSSSQSEKEFIEKEKEERQKHLQRLRNSMRKWLHKES 1118
Query: 745 DLLTLLNIFKFYEKQENKK-----QFCHKYFFNYKVLKRAAELKNQM 786
DLL++L + Y+ Q K FC + F N K + +L++Q+
Sbjct: 1119 DLLSILKVVGAYDYQIRKSPKDIDHFCSQNFLNTKSMSEIHKLRHQL 1165
Score = 46 (21.3 bits), Expect = 8.0e-18, Sum P(3) = 8.0e-18
Identities = 12/32 (37%), Positives = 20/32 (62%)
Query: 691 KKILKDKERDFECSDEIASILSLLQVQDIFIK 722
K +L +E + C I +I+S+L V+D F+K
Sbjct: 1031 KMLLLGQEHN--CLPYIIAIVSILTVKDPFLK 1060
>ZFIN|ZDB-GENE-030131-4078 [details] [associations]
symbol:dhx57 "DEAH (Asp-Glu-Ala-Asp/His) box
polypeptide 57" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR000571 InterPro:IPR001650 InterPro:IPR006575
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00642 Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103
PROSITE:PS51194 SMART:SM00356 SMART:SM00490 SMART:SM00847
ZFIN:ZDB-GENE-030131-4078 GO:GO:0005524 GO:GO:0008270 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GeneTree:ENSGT00550000074257
EMBL:BX248102 EMBL:AL935288 EMBL:CT998560 IPI:IPI00513320
Ensembl:ENSDART00000080351 ArrayExpress:F1QCB1 Bgee:F1QCB1
Uniprot:F1QCB1
Length = 1430
Score = 203 (76.5 bits), Expect = 1.1e-19, Sum P(5) = 1.1e-19
Identities = 76/275 (27%), Positives = 121/275 (44%)
Query: 399 VNYVQGVVDTAIKIHESMPVGDILAFVIGLEQIEHIIGILK--QYHNQREDLKLLILPMH 456
++ V+ +++ + S P G +L F+ GL +I+ + L+ + N R + ++ P+H
Sbjct: 871 MDLVESLLEWIVDGDHSYPPGAVLVFLPGLAEIKQLYEQLQSNRMFNNRRTNRCVVYPLH 930
Query: 457 GSLPNNEQIKVFRPTPRAMRKIVIATNIAETSITIPGIVYVIDPGFVKARWFNPNTLTNS 516
SL N EQ VF + KI+I+TNIAETS+TI +VYVID G +K + ++ + S
Sbjct: 931 SSLSNEEQQAVFTRPQNGVTKIIISTNIAETSVTIDDVVYVIDSGRMKEKRYDASRSMES 990
Query: 517 LVVVPISKXXXXXXXXXXXXXXXXHVYRKNFMYNRLFIHFCVSRNIPTIPNDPKDVKC-- 574
L V +S+ + F +R F H + +P I P + C
Sbjct: 991 LEDVWVSRANALQRKGRAGRVASGVCFHL-FTSHR-FEHHLSQQQLPEIQRVPLEQLCLR 1048
Query: 575 ----DVMFHKVFFSFFQYLLEAGWCYDTKLIGITEPRRISVTSLANRVSEELRTTLGHTV 630
+V + S F L+E T+ G E + + +L EE T LG +
Sbjct: 1049 VKVLEVFAERPLDSVFSQLIEP----PTE--GSLEAAKQRLCALGALTDEESLTPLGWHL 1102
Query: 631 GYTIRFDDCTTEDVTKIKYMTEGILMREMMTDPLL 665
C DV K M G + R + DP L
Sbjct: 1103 A-------CLPVDVRIGKLMLLGAIFRCL--DPAL 1128
Score = 183 (69.5 bits), Expect = 1.6e-10, Sum P(3) = 1.6e-10
Identities = 36/91 (39%), Positives = 60/91 (65%)
Query: 604 TEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTKIKYMTEGILMREMMTDP 663
T+PRRIS ++A RV++E LGH+ GY IR + + +T++ + T G+L+R + DP
Sbjct: 638 TQPRRISAIAVATRVAQERAEALGHSTGYQIRLETVRSS-ITRLMFCTTGVLLRRLEGDP 696
Query: 664 LLRKYSVIMLDEVHERTIFTDILMGLLKKIL 694
L + +++DEVHERT +D L+ +LK ++
Sbjct: 697 ELSGVTHVIVDEVHERTEESDFLLLVLKDLI 727
Score = 86 (35.3 bits), Expect = 1.1e-19, Sum P(5) = 1.1e-19
Identities = 18/53 (33%), Positives = 31/53 (58%)
Query: 346 LKRTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYYSNDPV 398
+KRT LK+I+ SAT++AE Q++N N + + G +PV ++ D +
Sbjct: 728 VKRTDLKVIMMSATLNAELFSQYFN-----NCPCIHIPGRTFPVEQFFLEDAI 775
Score = 70 (29.7 bits), Expect = 1.1e-19, Sum P(5) = 1.1e-19
Identities = 13/37 (35%), Positives = 24/37 (64%)
Query: 2 TEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILM 38
T G+L+ + DP + + +++D+VHERT +D L+
Sbjct: 684 TTGVLLRRLEGDPELSGVTHVIVDEVHERTEESDFLL 720
Score = 68 (29.0 bits), Expect = 1.1e-19, Sum P(5) = 1.1e-19
Identities = 30/119 (25%), Positives = 46/119 (38%)
Query: 701 FECSDEIASILSLLQVQDIFIKPSSGALSLKARVLRRNFEVEQGDLLTLLNIFKFY--EK 758
F C D +I + L + F+ P + L F + D L L+ +K +
Sbjct: 1121 FRCLDPALTIAASLAFKSPFVSPWDKREEANEKKLA--FSLANSDHLALMQAYKGWCNAA 1178
Query: 759 QENKK---QFCHKYFFNYKVLKRAAELKNQMILLLKKSSIPLVTSPRNTNAVLKCLTNG 814
Q K Q+C + F + + L+ A LK Q LL S I V + K + G
Sbjct: 1179 QSGFKAGYQYCRENFLSIRGLQEIACLKRQFAELL--SDIGFVKDGLKARVIEKMSSKG 1235
Score = 38 (18.4 bits), Expect = 1.1e-19, Sum P(5) = 1.1e-19
Identities = 7/20 (35%), Positives = 14/20 (70%)
Query: 837 LYIHPSSVLYTLQQPQCTHL 856
++IHPSSV ++++ +L
Sbjct: 1306 VHIHPSSVNFSVRHYDSPYL 1325
>CGD|CAL0004556 [details] [associations]
symbol:orf19.2090 species:5476 "Candida albicans" [GO:0030686
"90S preribosome" evidence=IEA] [GO:0032040 "small-subunit
processome" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0000462 "maturation
of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=IEA] [GO:0003724 "RNA helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 CGD:CAL0004556 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:AACQ01000031
EMBL:AACQ01000030 KO:K14780 RefSeq:XP_719536.1 RefSeq:XP_719660.1
STRING:Q5ACX7 GeneID:3638741 GeneID:3638820 KEGG:cal:CaO19.2090
KEGG:cal:CaO19.9637 Uniprot:Q5ACX7
Length = 1263
Score = 270 (100.1 bits), Expect = 1.7e-19, Sum P(2) = 1.7e-19
Identities = 61/137 (44%), Positives = 90/137 (65%)
Query: 587 QYLLEAGW---CYDTK--LIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTT 641
Q+L EAG+ +D +IG+T+PRR++ S+A RV EL GH VGY IRFD
Sbjct: 478 QFLYEAGFGNLLHDLYPGMIGVTQPRRVAAVSMAERVGSELGDH-GHRVGYQIRFDTTIK 536
Query: 642 ----EDVTKIKYMTEGILMREMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKILKDK 697
E+ T +K+MT+G+L+REMMTD LL KYS I++DE HER I TDIL+G+L +++K +
Sbjct: 537 NEGKENGTALKFMTDGVLLREMMTDFLLAKYSAIIIDEAHERNINTDILIGMLTRVVKLR 596
Query: 698 ERDFECSDEIASILSLL 714
+ + + ++ L L+
Sbjct: 597 RKYHKENPQLYKPLKLI 613
Score = 180 (68.4 bits), Expect = 1.9e-14, Sum P(3) = 1.9e-14
Identities = 53/172 (30%), Positives = 79/172 (45%)
Query: 400 NYVQGVVDTAIKIHESMPVGDILAFVIGLEQIEHIIGILKQYHNQREDL-KLLILPMHGS 458
N Q V D + +S G + + G E E G + ++ ++ L +LP++
Sbjct: 721 NVQQEVEDVDFSV-QSGDAGILDDYEEGEENEEEEEGFEESIDSKESEVGPLYVLPLYSL 779
Query: 459 LPNNEQIKVFRPTPRAMRKIVIATNIAETSITIPGIVYVIDPGFVKARWFNPNTLTNSLV 518
LP +Q+KVF P R ++ATN+AETS+TIPGI YV+D G K R +N S
Sbjct: 780 LPTKQQMKVFEDPPPGSRICIVATNVAETSLTIPGIRYVVDCGRSKERKYNQENGVQSFE 839
Query: 519 VVPISKXXXXXXXXXXXXXXXXHVYRKNFMYNR-LFIHFCVSRNIPTIPNDP 569
V +SK H YR +Y+ +F F ++P I P
Sbjct: 840 VDWVSKASANQRAGRAGRTGPGHCYR---LYSSAVFEDFFPQFSVPEILRMP 888
Score = 158 (60.7 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 37/95 (38%), Positives = 53/95 (55%)
Query: 46 RLYTEASFSQL-NECTPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRVALEL 104
RLY+ A F + + PE+ R S VL +K++GI I F FP+PP +L+ A EL
Sbjct: 865 RLYSSAVFEDFFPQFSVPEILRMPFESIVLSMKSMGIDQIANFPFPTPPDRFSLKKAEEL 924
Query: 105 LYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLL 139
L LGA+D +G+ M+ PL P AK+L+
Sbjct: 925 LVILGALDKEQKQITDLGKKMSLFPLSPRFAKILI 959
Score = 92 (37.4 bits), Expect = 1.9e-14, Sum P(3) = 1.9e-14
Identities = 29/99 (29%), Positives = 50/99 (50%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILMECSRKFSRLYTEASFSQLNECT 60
MT+G+L+ D + KYS I++D+ HER I TDIL+ + +L + + N
Sbjct: 549 MTDGVLLREMMTDFLLAKYSAIIIDEAHERNINTDILIGMLTRVVKL--RRKYHKENPQL 606
Query: 61 PPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLR 99
++ + SA L++ + L F +PPP N++
Sbjct: 607 YKPLKLI-IMSATLRVSDFSENPAL---FKTPPPIINVQ 641
Score = 54 (24.1 bits), Expect = 1.7e-19, Sum P(2) = 1.7e-19
Identities = 24/99 (24%), Positives = 48/99 (48%)
Query: 702 ECSDEIASILSLLQVQDIFIKPSS--GALSLKAR-VLRRNF--------EVE-QGDLLTL 749
EC I +I+S L V D FI + G ++ +AR R F +++ + + L
Sbjct: 965 ECLSYIIAIVSALSVGDPFIGENELVGNMNDEARREFRTKFYHSRALFSKLDASSNCMML 1024
Query: 750 LNIFKFYEK--QENKKQFCHKYFFNYKVLKRAAELKNQM 786
L+ Y+ +E + F K++ +K+++ +L+ Q+
Sbjct: 1025 LSAVCAYDHVPKEEQNGFLQKHYLRHKMMEEIQKLRKQV 1063
>UNIPROTKB|E1C550 [details] [associations]
symbol:DHX36 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003725
"double-stranded RNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0009615
"response to virus" evidence=IEA] [GO:0043330 "response to
exogenous dsRNA" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0003725 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GO:GO:0043330 GeneTree:ENSGT00550000074257
OMA:GRIAYND EMBL:AADN02021100 IPI:IPI00601151
Ensembl:ENSGALT00000016841 Uniprot:E1C550
Length = 985
Score = 199 (75.1 bits), Expect = 1.9e-19, Sum P(4) = 1.9e-19
Identities = 51/156 (32%), Positives = 75/156 (48%)
Query: 419 GDILAFVIGLEQIEHIIGILKQYHNQREDLKLLILPMHGSLPNNEQIKVFRPTPRAMRKI 478
G IL F+ G + I + +L + D + +I+P+H +P Q +VF+ TP +RKI
Sbjct: 470 GAILVFLPGWDNISTLHDLLMSQVMFKSD-RFIIIPLHSLMPTVNQTQVFKKTPPGVRKI 528
Query: 479 VIATNIAETSITIPGIVYVIDPGFVKARWFNPNTLTNSLVVVPISKXXXXXXXXXXXXXX 538
VIATNIAETSITI +V+VID G +K F+ +++ +SK
Sbjct: 529 VIATNIAETSITIDDVVFVIDGGKIKETHFDTQNNISTMAAEWVSKANAKQRKGRAGRVQ 588
Query: 539 XXHVYRKNFMYNRLFIHFCVSRNIPTIPNDPKDVKC 574
H Y +YN L +P I P + C
Sbjct: 589 PGHCYH---LYNGLRASLLDDYQLPEILRTPLEELC 621
Score = 160 (61.4 bits), Expect = 2.9e-10, Sum P(2) = 2.9e-10
Identities = 35/93 (37%), Positives = 54/93 (58%)
Query: 604 TEPRRISVTSLANRVSEELRTTLGH--TVGYTIRFDDCTTEDVTKIKYMTEGILMREMMT 661
T+PRRIS S+A RV+ E G+ + GY IR I Y T GI+++ + +
Sbjct: 243 TQPRRISAISVAERVAAERAEACGNGKSTGYQIRLQSRLPRKQGSILYCTTGIVLQWLQS 302
Query: 662 DPLLRKYSVIMLDEVHERTIFTDILMGLLKKIL 694
D L S ++LDE+HER + +D+LM ++K +L
Sbjct: 303 DKHLSSISHVVLDEIHERNLQSDVLMSIIKDLL 335
Score = 108 (43.1 bits), Expect = 4.0e-07, Sum P(3) = 4.0e-07
Identities = 31/95 (32%), Positives = 46/95 (48%)
Query: 47 LYTEASFSQLNECTPPEMQRTELSSAVLQLKALGIHNILRF--SFPSPPPAQNLRVALEL 104
LY S L++ PE+ RT L LQ+K L + I F PP + +A+
Sbjct: 595 LYNGLRASLLDDYQLPEILRTPLEELCLQIKILKLGGIAYFLSKLMDPPSRDAVMLAINH 654
Query: 105 LYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLL 139
L L A+D LT P+G +A +P+ P K++L
Sbjct: 655 LMELNALDRQEELT-PLGVHLARLPVEPHIGKMIL 688
Score = 76 (31.8 bits), Expect = 1.9e-19, Sum P(4) = 1.9e-19
Identities = 24/91 (26%), Positives = 41/91 (45%)
Query: 701 FECSDEIASILSLLQVQDIFIKPSSGALSLKARVLRRNFEVE-QGDLLTLLNIFKFYEKQ 759
F C D + +I + L +D F+ P AR R+ + D LT++N F +E+
Sbjct: 693 FCCLDPVLTIAASLSFKDPFVIPLGKEKVADAR--RKELSKNTKSDHLTVVNAFTGWEET 750
Query: 760 ENK-----KQFCHKYFFNYKVLKRAAELKNQ 785
+ K +C +YF + L+ +K Q
Sbjct: 751 RRRGFRTEKDYCWEYFLSPNTLQMLHNMKGQ 781
Score = 69 (29.3 bits), Expect = 1.9e-19, Sum P(4) = 1.9e-19
Identities = 13/37 (35%), Positives = 24/37 (64%)
Query: 2 TEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILM 38
T GI+++ D + S ++LD++HER + +D+LM
Sbjct: 292 TTGIVLQWLQSDKHLSSISHVVLDEIHERNLQSDVLM 328
Score = 69 (29.3 bits), Expect = 1.9e-19, Sum P(4) = 1.9e-19
Identities = 15/51 (29%), Positives = 29/51 (56%)
Query: 348 RTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYYSNDPV 398
R LK+I+ SAT++AE+ ++++ N ++ + G +PV Y D +
Sbjct: 338 RLDLKVILMSATLNAEKFSEYFD-----NCPMIHIPGFTFPVVEYLLEDVI 383
>UNIPROTKB|E2RHZ3 [details] [associations]
symbol:DHX37 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074985 KO:K14780 CTD:57647 OMA:AKLQPRT
EMBL:AAEX03014623 RefSeq:XP_534640.2 Ensembl:ENSCAFT00000011159
GeneID:477442 KEGG:cfa:477442 NextBio:20852918 Uniprot:E2RHZ3
Length = 1149
Score = 270 (100.1 bits), Expect = 2.1e-19, Sum P(2) = 2.1e-19
Identities = 49/108 (45%), Positives = 81/108 (75%)
Query: 587 QYLLEAGWCYDTKLIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTK 646
Q+L EAG+ D +IGITEPRR++ +++ RV++E+ + V Y IR++ TE+ T+
Sbjct: 281 QFLYEAGYSSDNSIIGITEPRRVAAVAMSQRVAKEMNLSQ-RVVSYQIRYEGNVTEE-TR 338
Query: 647 IKYMTEGILMREMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKIL 694
IK+MT+G+L++E+ D LL +Y V+++DE HER+++TDIL+GLL +I+
Sbjct: 339 IKFMTDGVLLKEIQKDFLLLRYKVVLIDEAHERSVYTDILIGLLSRIV 386
Score = 170 (64.9 bits), Expect = 3.4e-16, Sum P(4) = 3.4e-16
Identities = 38/97 (39%), Positives = 53/97 (54%)
Query: 448 LKLLILPMHGSLPNNEQIKVFRPTPRAMRKIVIATNIAETSITIPGIVYVIDPGFVKARW 507
L L +LP++ L +Q +VF+P P R V+ATN+AETS+TIPGI YV+D G VK R
Sbjct: 580 LPLHVLPLYSLLAPEKQAQVFQPPPEGTRLCVVATNVAETSLTIPGIKYVVDCGKVKKRH 639
Query: 508 FNPNTLTNSLVVVPISKXXXXXXXXXXXXXXXXHVYR 544
++ T +S V +S+ H YR
Sbjct: 640 YDRVTGVSSFRVTWVSQASADQRAGRAGRTEPGHCYR 676
Score = 158 (60.7 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 41/110 (37%), Positives = 57/110 (51%)
Query: 46 RLYTEASFSQLNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRVALELL 105
RLY+ A FS + PPE+ R + +LQ+KAL I ++ F FP+PP + L A ELL
Sbjct: 676 RLYSSAVFSDFEQFPPPEITRRPVEDLILQMKALNIEKVINFPFPTPPSVEALIAAEELL 735
Query: 106 YSLGAMDVNGN-----------LTKPV---GETMAEMPLHPIHAKVLLSS 141
+LGA+ L P+ G TMA P+ P +AK+L S
Sbjct: 736 IALGALQAPQKTESVKQLQRSWLGCPITALGRTMATFPVAPRYAKMLALS 785
Score = 106 (42.4 bits), Expect = 3.4e-16, Sum P(4) = 3.4e-16
Identities = 28/106 (26%), Positives = 52/106 (49%)
Query: 343 LKPLKRTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYYSN-DPVVNY 401
L+ + LKL+I SAT+ E+ Q + ++ V+ +PV+V+++ P+ +Y
Sbjct: 388 LRAKRHLPLKLLIMSATLRVEDFTQNQRLFPQP-PPVIKVESRQFPVTVHFNKRTPLEDY 446
Query: 402 VQGVVDTAIKIHESMPVGDILAFVIGLEQIEHIIGILKQY--HNQR 445
KIH +P G IL F+ G ++ + L++ H +R
Sbjct: 447 SGECFRKVCKIHRMLPAGGILVFLTGQAEVHALCRRLRRAFPHTRR 492
Score = 95 (38.5 bits), Expect = 4.3e-15, Sum P(4) = 4.3e-15
Identities = 28/94 (29%), Positives = 52/94 (55%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILMECSRKFSRLYTEASFSQLNECT 60
MT+G+L++ D + +Y V+++D+ HER+++TDIL+ SR+ + + L
Sbjct: 342 MTDGVLLKEIQKDFLLLRYKVVLIDEAHERSVYTDILIGL---LSRIVSLRAKRHL---- 394
Query: 61 PPEMQRTELSSAVLQLKALGIHNILRFSFPSPPP 94
P ++ + SA L+++ + L FP PPP
Sbjct: 395 PLKLL---IMSATLRVEDFTQNQRL---FPQPPP 422
Score = 58 (25.5 bits), Expect = 3.4e-16, Sum P(4) = 3.4e-16
Identities = 45/195 (23%), Positives = 80/195 (41%)
Query: 599 KLIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTKIKYMTEGI---- 654
K+I P SV +L +EEL LG ++ TE V +++ G
Sbjct: 713 KVINFPFPTPPSVEALI--AAEELLIALG-----ALQAPQ-KTESVKQLQRSWLGCPITA 764
Query: 655 LMREMMTDPLLRKYS-VIMLDEVHERTIFTDILMGLL--KKILKDKERDFECSDEIASIL 711
L R M T P+ +Y+ ++ L H + ++ + +++ ++ +R SDE
Sbjct: 765 LGRTMATFPVAPRYAKMLALSRQHGCLPYAITIVAAMTVRELFEELDRP-AASDE----- 818
Query: 712 SLLQVQDIFIKPSSGALSLKARVLRRNFEVEQGDLLTLLNIFKFYEKQENKKQFCHKYFF 771
L Q++D K + A +K + ++ GD++ LL E QFC
Sbjct: 819 ELGQLKD---KRARVA-QMKRIWAGQGASLKLGDIMVLLGAVGACEYSGRSPQFCEANGL 874
Query: 772 NYKVLKRAAELKNQM 786
YK + L+ Q+
Sbjct: 875 RYKAMMEIRRLRGQL 889
Score = 52 (23.4 bits), Expect = 2.1e-19, Sum P(2) = 2.1e-19
Identities = 9/23 (39%), Positives = 16/23 (69%)
Query: 824 YSGVYRTVRGNEDLYIHPSSVLY 846
+ Y+T ++ ++IHPSSVL+
Sbjct: 945 WKNAYKTPLLDDPVFIHPSSVLF 967
Score = 41 (19.5 bits), Expect = 1.2e-13, Sum P(3) = 1.2e-13
Identities = 23/96 (23%), Positives = 40/96 (41%)
Query: 591 EAGWCYDTKLIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTKIKYM 650
EAG D K+ P VT L V+ LG + ++ +D +D K Y
Sbjct: 899 EAGLFMDPKM---QPPSESQVTYLRQIVA----AGLGDHLARRVQSEDLL-DDKWKNAYK 950
Query: 651 TEGILMREMMTDPLLRKYSVIMLDEVHERTIFTDIL 686
T ++ DP+ S ++ E+ E ++ +I+
Sbjct: 951 TP------LLDDPVFIHPSSVLFKELPEFVVYQEIM 980
>UNIPROTKB|E1C9C2 [details] [associations]
symbol:DHX37 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074985 OMA:AKLQPRT EMBL:AADN02034854
IPI:IPI00601367 Ensembl:ENSGALT00000004688 Uniprot:E1C9C2
Length = 1145
Score = 275 (101.9 bits), Expect = 4.9e-19, Sum P(4) = 4.9e-19
Identities = 54/114 (47%), Positives = 85/114 (74%)
Query: 587 QYLLEAGWCYDTKLIGITEPRRISVTSLANRVSEELRTTLGH-TVGYTIRFDDCTTEDVT 645
Q+L EAG+ +IGITEPRR++ S++ RV++E+ L H V Y IR++ TT++ T
Sbjct: 277 QFLYEAGYTSSNGIIGITEPRRVAAVSMSQRVAKEMN--LSHRVVSYQIRYEGNTTDE-T 333
Query: 646 KIKYMTEGILMREMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKILKDKER 699
+IK+MT+G+L++E+ D LL KY VI++DE HER+++TDIL+GLL +I+ +E+
Sbjct: 334 QIKFMTDGVLLKEVQKDFLLSKYKVIIIDEAHERSMYTDILIGLLSRIVPLREK 387
Score = 184 (69.8 bits), Expect = 4.3e-17, Sum P(4) = 4.3e-17
Identities = 49/145 (33%), Positives = 70/145 (48%)
Query: 400 NYVQGVVDTAIKIHESMPVGDILAFVIGLEQIEHIIGILKQYHNQREDLKLLILPMHGSL 459
NY VD + ++ DI + L+ + G ++ L L +LP++ L
Sbjct: 530 NYAVVPVDEGDEDRDAETDDDIAGSDVDLDLGD---GDSEEEEKSDSSLPLYVLPLYSLL 586
Query: 460 PNNEQIKVFRPTPRAMRKIVIATNIAETSITIPGIVYVIDPGFVKARWFNPNTLTNSLVV 519
+Q KVFRP P R V+ATN+AETS+TIPGI YV+D G VK R+++ T +S V
Sbjct: 587 APEKQAKVFRPPPPGTRLCVVATNVAETSLTIPGIKYVVDCGKVKKRFYDKITGVSSFRV 646
Query: 520 VPISKXXXXXXXXXXXXXXXXHVYR 544
IS+ H YR
Sbjct: 647 TWISQASANQRAGRAGRTEPGHCYR 671
Score = 161 (61.7 bits), Expect = 1.2e-14, Sum P(4) = 1.2e-14
Identities = 39/110 (35%), Positives = 59/110 (53%)
Query: 46 RLYTEASFSQLNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRVALELL 105
RLY+ A F + + PE+ + + +LQ+KAL I ++ F FP+PPP + L A ELL
Sbjct: 671 RLYSSAVFMDFEKFSAPEITKRPVEDLILQMKALNIEKVINFPFPTPPPTEALAAAEELL 730
Query: 106 YSLGAMD---VNGNLTK-----------PVGETMAEMPLHPIHAKVLLSS 141
+LGA+ + G L + P+G MA P+ P +AK+L S
Sbjct: 731 IALGALKEPPMTGRLKEQQAAKLSCPISPLGRVMATFPVAPRYAKMLALS 780
Score = 109 (43.4 bits), Expect = 3.5e-09, Sum P(4) = 3.5e-09
Identities = 29/99 (29%), Positives = 50/99 (50%)
Query: 343 LKPLKRTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYYSND-PVVNY 401
L+ K LKLII SAT+ E+ + + A + +L V +PV+V+++ P+ +Y
Sbjct: 384 LREKKGLPLKLIIMSATLRVEDFTENTRLFAGT-PPVLQVDARQFPVTVHFNKKTPLDDY 442
Query: 402 VQGVVDTAIKIHESMPVGDILAFVIGLEQIEHIIGILKQ 440
KIH +P G IL F+ G ++ + L++
Sbjct: 443 SGECFRKVCKIHRMLPSGGILVFLTGQAEVHSLCRRLRK 481
Score = 98 (39.6 bits), Expect = 4.3e-17, Sum P(4) = 4.3e-17
Identities = 17/38 (44%), Positives = 29/38 (76%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILM 38
MT+G+L++ D + KY VI++D+ HER+++TDIL+
Sbjct: 338 MTDGVLLKEVQKDFLLSKYKVIIIDEAHERSMYTDILI 375
Score = 56 (24.8 bits), Expect = 4.9e-19, Sum P(4) = 4.9e-19
Identities = 11/29 (37%), Positives = 19/29 (65%)
Query: 824 YSGVYRTVRGNEDLYIHPSSVLYTLQQPQ 852
+ Y+T ++ ++IHPSSVL+ Q P+
Sbjct: 940 WKNAYKTALLDDPVFIHPSSVLFK-QLPE 967
Score = 56 (24.8 bits), Expect = 4.3e-17, Sum P(4) = 4.3e-17
Identities = 29/134 (21%), Positives = 56/134 (41%)
Query: 655 LMREMMTDPLLRKYS-VIMLDEVHERTIFTDILMGLLKKILKDKERDFECSDEIASILSL 713
L R M T P+ +Y+ ++ L H+ +T ++ + +E FE D A+
Sbjct: 760 LGRVMATFPVAPRYAKMLALSRQHDCLPYTITIVSAMTV----REL-FEEFDRPAAS--- 811
Query: 714 LQVQDIFIKPSSGALSLKARVLRRNFEVEQ-GDLLTLLNIFKFYEKQENKKQFCHKYFFN 772
+ + + +K G L R+ +++ GDL+ +L E +FC +
Sbjct: 812 -EEETVKLKGKKGRLVQMQRIWAGQGSLQKLGDLMVMLGAVGACEYSGCTPKFCEENGLR 870
Query: 773 YKVLKRAAELKNQM 786
YK + L+ Q+
Sbjct: 871 YKAMLEIRRLRGQL 884
Score = 38 (18.4 bits), Expect = 4.9e-19, Sum P(4) = 4.9e-19
Identities = 7/13 (53%), Positives = 10/13 (76%)
Query: 696 DKERDFECSDEIA 708
D++RD E D+IA
Sbjct: 540 DEDRDAETDDDIA 552
Score = 38 (18.4 bits), Expect = 4.9e-19, Sum P(4) = 4.9e-19
Identities = 10/48 (20%), Positives = 24/48 (50%)
Query: 96 QNLRVALELLYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLLSSGS 143
Q + ++LLY+ + + G + +P + + + P + K+ SG+
Sbjct: 105 QASQAEMKLLYTTSKLGIGGRMYQP--KRVLQEPGTAVPEKIRSISGA 150
>UNIPROTKB|E2RTK4 [details] [associations]
symbol:DHX34 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 InterPro:IPR015880 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00355 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008270 GO:GO:0003676
GO:GO:0005622 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 EMBL:AAEX03000836
Ensembl:ENSCAFT00000006692 Uniprot:E2RTK4
Length = 1140
Score = 228 (85.3 bits), Expect = 2.0e-18, Sum P(2) = 2.0e-18
Identities = 48/108 (44%), Positives = 72/108 (66%)
Query: 587 QYLLEAGWCYDTKLIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTK 646
QYLL AG+ + + T+PRRI+ SLA RVS E + G VGY IRF+ T TK
Sbjct: 196 QYLLAAGFSH----VACTQPRRIACISLAKRVSFESLSQYGSQVGYQIRFESTRTA-ATK 250
Query: 647 IKYMTEGILMREMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKIL 694
I ++T G+L+R++ +P L +Y V+++DEVHER + D L+G+L+++L
Sbjct: 251 IVFLTVGLLLRQIQREPSLPQYQVLIVDEVHERHLHNDFLLGVLRRLL 298
Score = 221 (82.9 bits), Expect = 1.1e-17, Sum P(2) = 1.1e-17
Identities = 73/263 (27%), Positives = 132/263 (50%)
Query: 273 RMDFEYISR-----GYMFRKGRMKILVSKIFKMSQGKP-SDSGVEPISQSYLVELSILAP 326
R+ FE +S+ GY R + +KI ++ G EP Y V L +
Sbjct: 222 RVSFESLSQYGSQVGYQIRFESTRTAATKIVFLTVGLLLRQIQREPSLPQYQV-LIVDEV 280
Query: 327 GGQDVIGEDMKAFAEQLKPLKRTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHL 386
+ + + + +L P KR LK+I+ SAT++ ++ A ++ V G L
Sbjct: 281 HERHLHNDFLLGVLRRLLP-KRPDLKVILMSATINISLFSSYFG-----TAPVVQVPGRL 334
Query: 387 YPVSVYYSN---DPVVNYVQGVVDTA--IKIHESM----PV---GDILAFVIGLEQIEHI 434
+P++V Y +PV + + + D +++ E++ P GD+L F+ G+ +I +
Sbjct: 335 FPITVVYQPQEAEPVASKSEKL-DPGPFLRVLEAIDNKYPPEERGDLLVFLSGMAEISSV 393
Query: 435 IGILKQYHNQREDLKLLILPMHGSLPNNEQIKVFRPTPRAMRKIVIATNIAETSITIPGI 494
+ + Y ++ + + ++LP+H +L +Q KVF P +RK +++TNIAETS+TI GI
Sbjct: 394 LEAAQTYASRTQ--RWVVLPLHSALSVADQDKVFDVAPPGVRKCILSTNIAETSVTIDGI 451
Query: 495 VYVIDPGFVKARWFNPNTLTNSL 517
+V+D G VK ++P + L
Sbjct: 452 RFVVDSGKVKEMGYDPQAKLHRL 474
Score = 152 (58.6 bits), Expect = 2.2e-14, Sum P(3) = 2.2e-14
Identities = 35/107 (32%), Positives = 59/107 (55%)
Query: 46 RLYTEASFSQLNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRVALELL 105
RLY E+ + PE++R L + VLQ+K++ + + F F PPP +L A+ L
Sbjct: 501 RLYAESDYDAFAPYPVPEIRRVALDALVLQMKSMSVGDPRTFPFIEPPPPASLETAILYL 560
Query: 106 YSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLLSSGSVLDSAVEIL 152
GA+D + LT P+G +A++P+ + K+L+ GS+ A +L
Sbjct: 561 QDQGALDSSEALT-PIGSLLAQLPVDVVIGKMLIL-GSMFHLAEPVL 605
Score = 87 (35.7 bits), Expect = 2.2e-14, Sum P(3) = 2.2e-14
Identities = 15/43 (34%), Positives = 28/43 (65%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILMECSRK 43
+T G+L+ +PS+ +Y V+++D+VHER + D L+ R+
Sbjct: 254 LTVGLLLRQIQREPSLPQYQVLIVDEVHERHLHNDFLLGVLRR 296
Score = 86 (35.3 bits), Expect = 2.0e-18, Sum P(2) = 2.0e-18
Identities = 27/97 (27%), Positives = 47/97 (48%)
Query: 701 FECSDEIASILSLLQVQDIFIKPSSGALSLKARVLRRNFEVEQGDLLTLLNIFKFY---- 756
F ++ + +I + L VQ F + S + + RR E +QGD TL N+F +
Sbjct: 598 FHLAEPVLTIAAALSVQSPFTR--SAQSNPECAAARRPLESDQGDPFTLFNVFNAWVQVK 655
Query: 757 -EKQENKKQFC-HKYFFNYKVLKRAAELKNQMILLLK 791
E+ N +++C H+ ++ L A L+ Q LL+
Sbjct: 656 SERSRNSRKWCRHRGIEEHR-LYEMANLRRQFKELLE 691
>UNIPROTKB|E2RTK2 [details] [associations]
symbol:DHX34 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 InterPro:IPR015880 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00355 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008270 GO:GO:0003676
GO:GO:0005622 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 OMA:DSDQVFH
GeneTree:ENSGT00700000104421 EMBL:AAEX03000836
Ensembl:ENSCAFT00000006694 Uniprot:E2RTK2
Length = 1177
Score = 228 (85.3 bits), Expect = 2.2e-18, Sum P(2) = 2.2e-18
Identities = 48/108 (44%), Positives = 72/108 (66%)
Query: 587 QYLLEAGWCYDTKLIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTK 646
QYLL AG+ + + T+PRRI+ SLA RVS E + G VGY IRF+ T TK
Sbjct: 201 QYLLAAGFSH----VACTQPRRIACISLAKRVSFESLSQYGSQVGYQIRFESTRTA-ATK 255
Query: 647 IKYMTEGILMREMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKIL 694
I ++T G+L+R++ +P L +Y V+++DEVHER + D L+G+L+++L
Sbjct: 256 IVFLTVGLLLRQIQREPSLPQYQVLIVDEVHERHLHNDFLLGVLRRLL 303
Score = 221 (82.9 bits), Expect = 1.2e-17, Sum P(2) = 1.2e-17
Identities = 73/263 (27%), Positives = 132/263 (50%)
Query: 273 RMDFEYISR-----GYMFRKGRMKILVSKIFKMSQGKP-SDSGVEPISQSYLVELSILAP 326
R+ FE +S+ GY R + +KI ++ G EP Y V L +
Sbjct: 227 RVSFESLSQYGSQVGYQIRFESTRTAATKIVFLTVGLLLRQIQREPSLPQYQV-LIVDEV 285
Query: 327 GGQDVIGEDMKAFAEQLKPLKRTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHL 386
+ + + + +L P KR LK+I+ SAT++ ++ A ++ V G L
Sbjct: 286 HERHLHNDFLLGVLRRLLP-KRPDLKVILMSATINISLFSSYFG-----TAPVVQVPGRL 339
Query: 387 YPVSVYYSN---DPVVNYVQGVVDTA--IKIHESM----PV---GDILAFVIGLEQIEHI 434
+P++V Y +PV + + + D +++ E++ P GD+L F+ G+ +I +
Sbjct: 340 FPITVVYQPQEAEPVASKSEKL-DPGPFLRVLEAIDNKYPPEERGDLLVFLSGMAEISSV 398
Query: 435 IGILKQYHNQREDLKLLILPMHGSLPNNEQIKVFRPTPRAMRKIVIATNIAETSITIPGI 494
+ + Y ++ + + ++LP+H +L +Q KVF P +RK +++TNIAETS+TI GI
Sbjct: 399 LEAAQTYASRTQ--RWVVLPLHSALSVADQDKVFDVAPPGVRKCILSTNIAETSVTIDGI 456
Query: 495 VYVIDPGFVKARWFNPNTLTNSL 517
+V+D G VK ++P + L
Sbjct: 457 RFVVDSGKVKEMGYDPQAKLHRL 479
Score = 152 (58.6 bits), Expect = 2.5e-14, Sum P(3) = 2.5e-14
Identities = 35/107 (32%), Positives = 59/107 (55%)
Query: 46 RLYTEASFSQLNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRVALELL 105
RLY E+ + PE++R L + VLQ+K++ + + F F PPP +L A+ L
Sbjct: 506 RLYAESDYDAFAPYPVPEIRRVALDALVLQMKSMSVGDPRTFPFIEPPPPASLETAILYL 565
Query: 106 YSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLLSSGSVLDSAVEIL 152
GA+D + LT P+G +A++P+ + K+L+ GS+ A +L
Sbjct: 566 QDQGALDSSEALT-PIGSLLAQLPVDVVIGKMLIL-GSMFHLAEPVL 610
Score = 87 (35.7 bits), Expect = 2.5e-14, Sum P(3) = 2.5e-14
Identities = 15/43 (34%), Positives = 28/43 (65%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILMECSRK 43
+T G+L+ +PS+ +Y V+++D+VHER + D L+ R+
Sbjct: 259 LTVGLLLRQIQREPSLPQYQVLIVDEVHERHLHNDFLLGVLRR 301
Score = 86 (35.3 bits), Expect = 2.2e-18, Sum P(2) = 2.2e-18
Identities = 27/97 (27%), Positives = 47/97 (48%)
Query: 701 FECSDEIASILSLLQVQDIFIKPSSGALSLKARVLRRNFEVEQGDLLTLLNIFKFY---- 756
F ++ + +I + L VQ F + S + + RR E +QGD TL N+F +
Sbjct: 603 FHLAEPVLTIAAALSVQSPFTR--SAQSNPECAAARRPLESDQGDPFTLFNVFNAWVQVK 660
Query: 757 -EKQENKKQFC-HKYFFNYKVLKRAAELKNQMILLLK 791
E+ N +++C H+ ++ L A L+ Q LL+
Sbjct: 661 SERSRNSRKWCRHRGIEEHR-LYEMANLRRQFKELLE 696
>SGD|S000004735 [details] [associations]
symbol:ECM16 "Essential DEAH-box ATP-dependent RNA helicase
specific to U3 snoRNP" species:4932 "Saccharomyces cerevisiae"
[GO:0005730 "nucleolus" evidence=IEA;IDA] [GO:0000462 "maturation
of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=IMP] [GO:0042254 "ribosome biogenesis"
evidence=IEA;IDA;TAS] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0032040
"small-subunit processome" evidence=IDA] [GO:0030686 "90S
preribosome" evidence=IDA] [GO:0003724 "RNA helicase activity"
evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 SGD:S000004735 GO:GO:0005739 GO:GO:0005524
GO:GO:0005730 GO:GO:0003723 EMBL:BK006946 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0030686 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0032040 GO:GO:0008026
GO:GO:0003724 GO:GO:0000462 EMBL:Z48622 PIR:S53058
RefSeq:NP_013847.1 ProteinModelPortal:Q04217 SMR:Q04217
DIP:DIP-6722N IntAct:Q04217 MINT:MINT-614026 STRING:Q04217
PaxDb:Q04217 PeptideAtlas:Q04217 PRIDE:Q04217 EnsemblFungi:YMR128W
GeneID:855158 KEGG:sce:YMR128W CYGD:YMR128w
GeneTree:ENSGT00550000074985 HOGENOM:HOG000201240 KO:K14780
OMA:HQLKREE OrthoDB:EOG4KM2B8 NextBio:978575 Genevestigator:Q04217
GermOnline:YMR128W Uniprot:Q04217
Length = 1267
Score = 271 (100.5 bits), Expect = 2.4e-18, Sum P(2) = 2.4e-18
Identities = 58/114 (50%), Positives = 80/114 (70%)
Query: 587 QYLLEAGW-CYDTK----LIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTT 641
Q+L EAG+ D+ ++GIT+PRR++ S+A RV+ EL GH VGY IRFD
Sbjct: 426 QFLYEAGFGAEDSPDYPGMVGITQPRRVAAVSMAERVANELGDH-GHKVGYQIRFDSTAK 484
Query: 642 EDVTKIKYMTEGILMREMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKILK 695
ED TK+K+MT+G+L+REMM D L KYS I++DE HER I TDIL+G+L + ++
Sbjct: 485 ED-TKVKFMTDGVLLREMMHDFKLTKYSSIIIDEAHERNINTDILIGMLSRCVR 537
Score = 177 (67.4 bits), Expect = 2.8e-17, Sum P(3) = 2.8e-17
Identities = 36/95 (37%), Positives = 52/95 (54%)
Query: 450 LLILPMHGSLPNNEQIKVFRPTPRAMRKIVIATNIAETSITIPGIVYVIDPGFVKARWFN 509
L +LP++ LP EQ++VF+ P+ R ++ATN+AETS+TIPG+ YV+D G K R +N
Sbjct: 729 LYVLPLYSLLPTKEQMRVFQKPPQGSRLCIVATNVAETSLTIPGVRYVVDSGRSKERKYN 788
Query: 510 PNTLTNSLVVVPISKXXXXXXXXXXXXXXXXHVYR 544
+ S V +SK H YR
Sbjct: 789 ESNGVQSFEVGWVSKASANQRSGRAGRTGPGHCYR 823
Score = 174 (66.3 bits), Expect = 5.6e-08, Sum P(2) = 5.6e-08
Identities = 40/97 (41%), Positives = 59/97 (60%)
Query: 46 RLYTEASFSQ-LNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRVALEL 104
RLY+ A F + + PE+ R + S VLQ+K++ IHNI+ F FP+PP L A++L
Sbjct: 823 RLYSSAVFEHDFEQFSKPEILRMPVESIVLQMKSMAIHNIINFPFPTPPDRVALSKAIQL 882
Query: 105 LYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLLSS 141
L LGA+D +T+ G+ M+ PL P +K+LL S
Sbjct: 883 LQYLGALDNKEMITED-GKKMSLFPLSPRFSKMLLVS 918
Score = 135 (52.6 bits), Expect = 2.8e-17, Sum P(3) = 2.8e-17
Identities = 29/105 (27%), Positives = 55/105 (52%)
Query: 336 MKAFAEQLKPLKRTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYYSN 395
++A + P++ +LKLII SAT+ + + + + +L V +PVS++++
Sbjct: 538 LRAKLHKENPIEHKKLKLIIMSATLRVSDFSENKTLFPIA-PPVLQVDARQFPVSIHFNR 596
Query: 396 DPVVNYVQGVVDTAIKIHESMPVGDILAFVIGLEQIEHIIGILKQ 440
NY KIH+ +P G IL F+ G ++I H++ L++
Sbjct: 597 RTAFNYTDEAFRKTCKIHQKLPPGAILVFLTGQQEITHMVKRLRK 641
Score = 110 (43.8 bits), Expect = 9.9e-15, Sum P(3) = 9.9e-15
Identities = 33/96 (34%), Positives = 52/96 (54%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILMECSRKFSRLYTEASFSQLNECT 60
MT+G+L+ HD + KYS I++D+ HER I TDIL+ + RL ++L++
Sbjct: 492 MTDGVLLREMMHDFKLTKYSSIIIDEAHERNINTDILIGMLSRCVRLR-----AKLHKEN 546
Query: 61 PPEMQRTEL--SSAVLQLKALGIHNILRFSFPSPPP 94
P E ++ +L SA L++ + L FP PP
Sbjct: 547 PIEHKKLKLIIMSATLRVSDFSENKTL---FPIAPP 579
Score = 42 (19.8 bits), Expect = 2.4e-18, Sum P(2) = 2.4e-18
Identities = 13/28 (46%), Positives = 16/28 (57%)
Query: 824 YSGVYRTVRGN-ED--LYIHPSSVLYTL 848
Y V T N ED +YIHP+S+L L
Sbjct: 1117 YIPVLATRTPNIEDCFVYIHPTSILNNL 1144
>MGI|MGI:1918973 [details] [associations]
symbol:Dhx34 "DEAH (Asp-Glu-Ala-His) box polypeptide 34"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005622
"intracellular" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 InterPro:IPR015880
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00355 SMART:SM00490 SMART:SM00847
MGI:MGI:1918973 GO:GO:0005524 GO:GO:0008270 GO:GO:0003723
GO:GO:0005622 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
CTD:9704 HOGENOM:HOG000232193 ChiTaRS:DHX34 EMBL:AK129062
EMBL:AK004733 IPI:IPI00113303 RefSeq:NP_082159.3 UniGene:Mm.75259
ProteinModelPortal:Q9DBV3 SMR:Q9DBV3 PhosphoSite:Q9DBV3
PaxDb:Q9DBV3 PRIDE:Q9DBV3 Ensembl:ENSMUST00000094816
Ensembl:ENSMUST00000163968 GeneID:71723 KEGG:mmu:71723
GeneTree:ENSGT00700000104421 HOVERGEN:HBG051355 NextBio:334335
Bgee:Q9DBV3 CleanEx:MM_DHX34 Genevestigator:Q9DBV3
GermOnline:ENSMUSG00000006019 Uniprot:Q9DBV3
Length = 1145
Score = 224 (83.9 bits), Expect = 2.7e-18, Sum P(2) = 2.7e-18
Identities = 47/111 (42%), Positives = 72/111 (64%)
Query: 587 QYLLEAGWCYDTKLIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTK 646
QYLL AG+ + + T+PRRI+ SLA RV E + G VGY IRF+ T TK
Sbjct: 199 QYLLAAGFSH----VACTQPRRIACISLAKRVGFESLSQYGSQVGYQIRFES-TRSAATK 253
Query: 647 IKYMTEGILMREMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKILKDK 697
I ++T G+L+R++ +P L +Y V+++DEVHER + D L+G+L+++L +
Sbjct: 254 IVFLTVGLLLRQIQREPSLPQYQVLIVDEVHERHLHNDFLLGVLQRLLPQR 304
Score = 212 (79.7 bits), Expect = 5.2e-17, Sum P(2) = 5.2e-17
Identities = 70/255 (27%), Positives = 130/255 (50%)
Query: 273 RMDFEYISR-----GYMFRKGRMKILVSKIFKMSQGKP-SDSGVEPISQSYLVELSILAP 326
R+ FE +S+ GY R + +KI ++ G EP Y V L +
Sbjct: 225 RVGFESLSQYGSQVGYQIRFESTRSAATKIVFLTVGLLLRQIQREPSLPQYQV-LIVDEV 283
Query: 327 GGQDVIGEDMKAFAEQLKPLKRTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHL 386
+ + + + ++L P +R LK+I+ SAT++ ++ S+A ++ V G L
Sbjct: 284 HERHLHNDFLLGVLQRLLP-QRPDLKVILMSATINISLFSSYF-----SHAPVVQVPGRL 337
Query: 387 YPVSVYYSN---DPVVNYVQGVVDTA-IKIHESM----PV---GDILAFVIGLEQIEHII 435
+P++V Y D + + + +++ E++ P GD+L F+ G+ +I ++
Sbjct: 338 FPITVVYQPQEADQTASKSEKLDPRPFLRVLEAIDNKYPPEERGDLLVFLSGMAEITTVL 397
Query: 436 GILKQYHNQREDLKLLILPMHGSLPNNEQIKVFRPTPRAMRKIVIATNIAETSITIPGIV 495
+ Y + + + ++LP+H +L ++Q KVF P +RK +++TNIAETS+TI GI
Sbjct: 398 DAAQAYASLTQ--RWVVLPLHSALSVSDQDKVFDVAPAGVRKCILSTNIAETSVTIDGIR 455
Query: 496 YVIDPGFVKARWFNP 510
+V+D G VK ++P
Sbjct: 456 FVVDSGKVKEMSYDP 470
Score = 150 (57.9 bits), Expect = 2.9e-14, Sum P(3) = 2.9e-14
Identities = 34/107 (31%), Positives = 59/107 (55%)
Query: 46 RLYTEASFSQLNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRVALELL 105
RLY E+ + PE++R L + VLQ+K++ + + F F PPP ++ A+ L
Sbjct: 504 RLYAESDYDAFAPYPVPEIRRVALDALVLQMKSMSVGDPRTFPFIEPPPPASVETAILYL 563
Query: 106 YSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLLSSGSVLDSAVEIL 152
GA+D + LT P+G +A++P+ + K+L+ GS+ A +L
Sbjct: 564 QEQGALDSSEALT-PIGSLLAQLPVDVVIGKMLIL-GSMFSLAEPVL 608
Score = 89 (36.4 bits), Expect = 2.7e-18, Sum P(2) = 2.7e-18
Identities = 27/96 (28%), Positives = 44/96 (45%)
Query: 701 FECSDEIASILSLLQVQDIFIKPSSGALSLKARVLRRNFEVEQGDLLTLLNIFKFY---- 756
F ++ + +I + L VQ F + S +L RR E +QGD TL N+F +
Sbjct: 601 FSLAEPVLTIAAALSVQSPFTR--SAQSNLDCATARRPLESDQGDPFTLFNVFNAWVQVK 658
Query: 757 -EKQENKKQFCHKYFFNYKVLKRAAELKNQMILLLK 791
E+ N +++C + L A L+ Q LL+
Sbjct: 659 SERSGNSRKWCRRRGVEEHRLYEMANLRRQFKELLE 694
Score = 85 (35.0 bits), Expect = 2.9e-14, Sum P(3) = 2.9e-14
Identities = 14/38 (36%), Positives = 26/38 (68%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILM 38
+T G+L+ +PS+ +Y V+++D+VHER + D L+
Sbjct: 257 LTVGLLLRQIQREPSLPQYQVLIVDEVHERHLHNDFLL 294
>FB|FBgn0052533 [details] [associations]
symbol:CG32533 species:7227 "Drosophila melanogaster"
[GO:0004386 "helicase activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=ISS] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:AE014298 GO:GO:0006200 GO:GO:0003676
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
OMA:DSDQVFH GeneTree:ENSGT00700000104421 EMBL:AY058623
RefSeq:NP_728244.1 UniGene:Dm.4145 SMR:Q9VWI5
EnsemblMetazoa:FBtr0074786 GeneID:32933 KEGG:dme:Dmel_CG32533
UCSC:CG32533-RA FlyBase:FBgn0052533 InParanoid:Q9VWI5
OrthoDB:EOG4V9S5G GenomeRNAi:32933 NextBio:781096 Uniprot:Q9VWI5
Length = 1139
Score = 223 (83.6 bits), Expect = 5.4e-18, Sum P(3) = 5.4e-18
Identities = 60/181 (33%), Positives = 93/181 (51%)
Query: 348 RTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYYSNDPVVNYVQGV-- 405
R QLKLI+ SAT++ E F+ A ++ V G L+P+ + Y P + G
Sbjct: 286 RPQLKLILMSATINVE---LFHGYFGEEGARLVQVPGRLFPIKLRYLPPPALELKAGQAT 342
Query: 406 --------VDTA--IK----IHESMPV---GDILAFVIGLEQIEHIIGILKQYHNQREDL 448
+D A ++ I + P GD+L FV G+ +IE ++ + +Y E
Sbjct: 343 SKRSQRNRIDPAPFVQVLSLIDQQYPTSERGDVLIFVSGVNEIESVVEAVHEYAT--EQT 400
Query: 449 KLLILPMHGSLPNNEQIKVFRPTPRAMRKIVIATNIAETSITIPGIVYVIDPGFVKARWF 508
L+LP+H +Q KVF P MRK +++TNIAETS+T+ G+ +V+D G VK F
Sbjct: 401 HWLVLPLHSGQAIADQSKVFDYAPEGMRKCIVSTNIAETSLTVDGVRFVVDSGKVKEMNF 460
Query: 509 N 509
+
Sbjct: 461 D 461
Score = 200 (75.5 bits), Expect = 2.7e-12, Sum P(2) = 2.7e-12
Identities = 42/109 (38%), Positives = 68/109 (62%)
Query: 587 QYLLEAGWCYDTKLIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTK 646
QYL + G+ + I T+PRR++ SL RV+ EL G V + IRF+ T+ +T
Sbjct: 181 QYLYDFGY----RSIACTQPRRLACVSLCKRVAHELLDDYGSRVAFQIRFERSRTK-LTN 235
Query: 647 IKYMTEGILMREMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKILK 695
I ++TEG+L+R++ L +Y ++LDE+HER +F D L+G+ K +L+
Sbjct: 236 ILFITEGLLLRQLAVAANLDQYDALILDEIHERNLFGDFLLGVTKCLLR 284
Score = 118 (46.6 bits), Expect = 7.3e-07, Sum P(3) = 7.3e-07
Identities = 29/107 (27%), Positives = 53/107 (49%)
Query: 46 RLYTEASFSQLNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRVALELL 105
RLYT ++ PE+ R L + +LQ+ ++G+ ++ F F P + + + L
Sbjct: 496 RLYTAEQYNAFEAYPTPEIYRVPLDTMLLQMVSMGLPDVRAFPFIEAPETERIEQTILAL 555
Query: 106 YSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLLSSGSVLDSAVEIL 152
A+ V +T P+G ++A +P+ K+LL GSV ++L
Sbjct: 556 KQHCALSVEEKIT-PLGRSLANLPVELSIGKMLLM-GSVFPEVEQLL 600
Score = 78 (32.5 bits), Expect = 5.4e-18, Sum P(3) = 5.4e-18
Identities = 13/38 (34%), Positives = 26/38 (68%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILM 38
+TEG+L+ ++++Y ++LD++HER +F D L+
Sbjct: 239 ITEGLLLRQLAVAANLDQYDALILDEIHERNLFGDFLL 276
Score = 56 (24.8 bits), Expect = 5.4e-18, Sum P(3) = 5.4e-18
Identities = 17/93 (18%), Positives = 44/93 (47%)
Query: 705 DEIASILSLLQVQDIFIKPSSGALSLKARVLRR--NFEVEQGDLLTLLNIFKFYE----K 758
+++ ++ ++L VQ+ P + R +R + E + GDL TL+ ++ + +
Sbjct: 597 EQLLTLAAMLSVQN----PLTNRAHTDQRCVRERESLESDHGDLFTLVRLYNVWVQLKMR 652
Query: 759 QENKKQFCHKYFFNYKVLKRAAELKNQMILLLK 791
++ +Q+C + + +L+ Q +L+
Sbjct: 653 RDGTRQWCRRLGIEEQRFYEVTKLRQQFQRILE 685
>UNIPROTKB|Q14147 [details] [associations]
symbol:DHX34 "Probable ATP-dependent RNA helicase DHX34"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 InterPro:IPR015880 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00355
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0008270
GO:GO:0003723 GO:GO:0005622 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:D50924 EMBL:AC008754 EMBL:AK297692
IPI:IPI00382739 RefSeq:NP_055496.2 UniGene:Hs.151706
ProteinModelPortal:Q14147 SMR:Q14147 IntAct:Q14147
PhosphoSite:Q14147 DMDM:311033371 PaxDb:Q14147 PRIDE:Q14147
DNASU:9704 Ensembl:ENST00000328771 GeneID:9704 KEGG:hsa:9704
UCSC:uc010xyn.2 CTD:9704 GeneCards:GC19P047853 HGNC:HGNC:16719
HPA:HPA042159 HPA:HPA043558 neXtProt:NX_Q14147 PharmGKB:PA27221
HOGENOM:HOG000232193 OMA:DSDQVFH OrthoDB:EOG4GB75B PhylomeDB:Q14147
ChiTaRS:DHX34 GenomeRNAi:9704 NextBio:36469 Bgee:Q14147
CleanEx:HS_DHX34 Genevestigator:Q14147 GermOnline:ENSG00000134815
Uniprot:Q14147
Length = 1143
Score = 223 (83.6 bits), Expect = 5.8e-17, Sum P(3) = 5.8e-17
Identities = 47/108 (43%), Positives = 71/108 (65%)
Query: 587 QYLLEAGWCYDTKLIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTK 646
QYLL AG+ + + T+PRRI+ SLA RV E + G VGY IRF+ T TK
Sbjct: 197 QYLLAAGFSH----VACTQPRRIACISLAKRVGFESLSQYGSQVGYQIRFES-TRSAATK 251
Query: 647 IKYMTEGILMREMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKIL 694
I ++T G+L+R++ +P L +Y V+++DEVHER + D L+G+L+++L
Sbjct: 252 IVFLTVGLLLRQIQREPSLPQYEVLIVDEVHERHLHNDFLLGVLQRLL 299
Score = 221 (82.9 bits), Expect = 9.1e-18, Sum P(2) = 9.1e-18
Identities = 76/258 (29%), Positives = 130/258 (50%)
Query: 273 RMDFEYISR-----GYMFRKGRMKILVSKIFKMSQGKP-SDSGVEPISQSYLVELSILAP 326
R+ FE +S+ GY R + +KI ++ G EP Y E+ I+
Sbjct: 223 RVGFESLSQYGSQVGYQIRFESTRSAATKIVFLTVGLLLRQIQREPSLPQY--EVLIVDE 280
Query: 327 GGQDVIGED-MKAFAEQLKPLKRTQLKLIISSATVDAEEICQFYNISASSNATILSVKGH 385
+ + D + ++L P R LK+I+ SAT++ ++ SNA ++ V G
Sbjct: 281 VHERHLHNDFLLGVLQRLLPT-RPDLKVILMSATINISLFSSYF-----SNAPVVQVPGR 334
Query: 386 LYPVSVYYSN---DPVVNYVQGVVDTA-IKIHESM----PV---GDILAFVIGLEQIEHI 434
L+P++V Y +P + + + +++ ES+ P GD+L F+ G+ +I +
Sbjct: 335 LFPITVVYQPQEAEPTTSKSEKLDPRPFLRVLESIDHKYPPEERGDLLVFLSGMAEISAV 394
Query: 435 IGILKQY--HNQREDLKLLILPMHGSLPNNEQIKVFRPTPRAMRKIVIATNIAETSITIP 492
+ + Y H QR ++LP+H +L +Q KVF P +RK +++TNIAETS+TI
Sbjct: 395 LEAAQTYASHTQR----WVVLPLHSALSVADQDKVFDVAPPGVRKCILSTNIAETSVTID 450
Query: 493 GIVYVIDPGFVKARWFNP 510
GI +V+D G VK ++P
Sbjct: 451 GIRFVVDSGKVKEMSYDP 468
Score = 154 (59.3 bits), Expect = 1.8e-14, Sum P(3) = 1.8e-14
Identities = 38/108 (35%), Positives = 61/108 (56%)
Query: 46 RLYTEASFSQLNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRVALELL 105
RLY E+ + PE++R L S VLQ+K++ + + F F PPP +L A+ L
Sbjct: 502 RLYAESDYDAFAPYPVPEIRRVALDSLVLQMKSMSVGDPRTFPFIEPPPPASLETAILYL 561
Query: 106 YSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLLSSGSVLDSAVEILL 153
GA+D + LT P+G +A++P+ + K+L+ GS+ S VE +L
Sbjct: 562 RDQGALDSSEALT-PIGSLLAQLPVDVVIGKMLIL-GSMF-SLVEPVL 606
Score = 87 (35.7 bits), Expect = 9.1e-18, Sum P(2) = 9.1e-18
Identities = 27/96 (28%), Positives = 43/96 (44%)
Query: 701 FECSDEIASILSLLQVQDIFIKPSSGALSLKARVLRRNFEVEQGDLLTLLNIFKFY---- 756
F + + +I + L VQ F + S S + RR E +QGD TL N+F +
Sbjct: 599 FSLVEPVLTIAAALSVQSPFTR--SAQSSPECAAARRPLESDQGDPFTLFNVFNAWVQVK 656
Query: 757 -EKQENKKQFCHKYFFNYKVLKRAAELKNQMILLLK 791
E+ N +++C + L A L+ Q LL+
Sbjct: 657 SERSRNSRKWCRRRGIEEHRLYEMANLRRQFKELLE 692
Score = 85 (35.0 bits), Expect = 1.8e-14, Sum P(3) = 1.8e-14
Identities = 14/38 (36%), Positives = 26/38 (68%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILM 38
+T G+L+ +PS+ +Y V+++D+VHER + D L+
Sbjct: 255 LTVGLLLRQIQREPSLPQYEVLIVDEVHERHLHNDFLL 292
Score = 37 (18.1 bits), Expect = 5.8e-17, Sum P(3) = 5.8e-17
Identities = 11/37 (29%), Positives = 18/37 (48%)
Query: 317 YLVELSILAPG--GQDVIGEDMKAFAEQLKPLKRTQL 351
Y + LS+L P G +G + A E++ +R L
Sbjct: 104 YRINLSVLGPATRGSQGLGRHLPA--ERVAEFRRALL 138
>UNIPROTKB|Q608K8 [details] [associations]
symbol:MCA1482 "ATP-dependent helicase HrpA" species:243233
"Methylococcus capsulatus str. Bath" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR010222
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 EMBL:AE017282 GenomeReviews:AE017282_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000247272 KO:K03578
OMA:TYQFEPG InterPro:IPR024590 Pfam:PF11898 TIGRFAMs:TIGR01967
RefSeq:YP_113939.1 ProteinModelPortal:Q608K8 GeneID:3104911
KEGG:mca:MCA1482 PATRIC:22606802 Uniprot:Q608K8
Length = 1294
Score = 236 (88.1 bits), Expect = 9.8e-18, Sum P(3) = 9.8e-18
Identities = 65/195 (33%), Positives = 106/195 (54%)
Query: 339 FAEQLKPLKRTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYY----- 393
+ + L P +R LKL+I+SAT+D E + ++ NA I+ V G YPV + Y
Sbjct: 209 YLKWLLP-RRHDLKLVITSATIDPERFSRHFD-----NAPIVRVPGRTYPVEIRYRPPDS 262
Query: 394 ----SNDPVVNYVQGVVDTAIKIHESMPVGDILAFVIGLEQIEHIIGILKQYHNQREDLK 449
S++ Q ++D ++H GDIL F+ G +I L+++H D +
Sbjct: 263 AEEESDETERGEQQAILDAVDELHREN-TGDILIFLSGEREIRDTAESLRKHHPA--DCE 319
Query: 450 LLILPMHGSLPNNEQIKVFRPTPRAMRKIVIATNIAETSITIPGIVYVIDPGFVKARWFN 509
+LP++ L +EQ K+F+P R R+IV+ATN+AETS+T+PGI VID G+ + ++
Sbjct: 320 --VLPLYSRLTVSEQEKIFKPHGR--RRIVLATNVAETSLTVPGIRGVIDAGYARISRYS 375
Query: 510 PNTLTNSLVVVPISK 524
+ L + IS+
Sbjct: 376 HRSKLQRLPIEKISR 390
Score = 227 (85.0 bits), Expect = 1.1e-13, Sum P(2) = 1.1e-13
Identities = 46/94 (48%), Positives = 65/94 (69%)
Query: 601 IGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTKIKYMTEGILMREMM 660
IG T+PRRI+ S+A R+++EL+ LG TVGY +RF D T D + IK MT+GIL+ E
Sbjct: 122 IGHTQPRRIAARSVAARIADELKRPLGETVGYKVRFHDQTRPD-SLIKLMTDGILLAETQ 180
Query: 661 TDPLLRKYSVIMLDEVHERTIFTDILMGLLKKIL 694
TD L +Y +++DE HER++ D L+G LK +L
Sbjct: 181 TDRFLDQYDTLIVDEAHERSLNIDFLLGYLKWLL 214
Score = 167 (63.8 bits), Expect = 2.1e-10, Sum P(3) = 2.1e-10
Identities = 36/95 (37%), Positives = 56/95 (58%)
Query: 46 RLYTEASFSQLNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRVALELL 105
RLY+E F E T PE+ RT L++ +LQ+KAL + +I F F PP + +R L L
Sbjct: 410 RLYSEQDFLNRPEFTDPEILRTNLAAVILQMKALNLGDIRVFPFVEPPDERLVRDGLRTL 469
Query: 106 YSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLLS 140
+ A+D G LT+ +G +A +P+ P ++LL+
Sbjct: 470 QEINALDAQGRLTE-LGRRLARLPVDPRLGRILLA 503
Score = 77 (32.2 bits), Expect = 9.8e-18, Sum P(3) = 9.8e-18
Identities = 13/38 (34%), Positives = 25/38 (65%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILM 38
MT+GIL+ D +++Y +++D+ HER++ D L+
Sbjct: 170 MTDGILLAETQTDRFLDQYDTLIVDEAHERSLNIDFLL 207
Score = 43 (20.2 bits), Expect = 9.8e-18, Sum P(3) = 9.8e-18
Identities = 8/26 (30%), Positives = 17/26 (65%)
Query: 772 NYKVLKRAAELKNQMILLLKKSSIPL 797
+++V ++AAE + +L+L + I L
Sbjct: 807 SFEVWRKAAERREPRLLMLSREDITL 832
Score = 38 (18.4 bits), Expect = 6.9e-10, Sum P(3) = 6.9e-10
Identities = 10/20 (50%), Positives = 11/20 (55%)
Query: 220 RRALDFPDMP--YQLRYIGQ 237
RR DF D+P Y R GQ
Sbjct: 1012 RRVWDFDDLPTTYSGRVDGQ 1031
>WB|WBGene00009922 [details] [associations]
symbol:F52B5.3 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] InterPro:IPR001374 InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF01424 Pfam:PF04408 PROSITE:PS51061 PROSITE:PS51194
SMART:SM00393 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0009792 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 GeneTree:ENSGT00700000104393
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:Z75541
PIR:T22493 RefSeq:NP_492260.1 ProteinModelPortal:Q20644 SMR:Q20644
STRING:Q20644 PaxDb:Q20644 EnsemblMetazoa:F52B5.3 GeneID:172615
KEGG:cel:CELE_F52B5.3 UCSC:F52B5.3 CTD:172615 WormBase:F52B5.3
InParanoid:Q20644 OMA:NSMPETQ NextBio:876269 Uniprot:Q20644
Length = 1425
Score = 207 (77.9 bits), Expect = 1.5e-17, Sum P(3) = 1.5e-17
Identities = 47/143 (32%), Positives = 84/143 (58%)
Query: 384 GHLYPVSVYYSNDPVVNYVQGVVDTAIKIHESMPV-GDILAFVIGLEQIEHIIGILKQYH 442
G Y + S++ V+YV ++D I+ PV G IL F+ G E I+ ++ + +
Sbjct: 611 GEKYNLFYGSSSNNSVDYV--LLDQVIQYLADSPVFGTILVFLPGYEDIQQMLKAIDCWK 668
Query: 443 NQREDLK-LLILPMHGSLPNNEQIKVFRPTPRAMRKIVIATNIAETSITIPGIVYVIDPG 501
N +++K +++LP+H + + +F+ P+ RKI++ATNIAE SITI +++V+D G
Sbjct: 669 NSLKNMKNVIVLPLHSQMTSINHGDIFKSVPKDTRKIILATNIAEASITIEDVIFVVDTG 728
Query: 502 FVKARWFNPNTLTNSLVVVPISK 524
VK + F+ ++L V PI++
Sbjct: 729 KVKEKSFDHEAKLSTLTVKPIAR 751
Score = 196 (74.1 bits), Expect = 2.5e-11, P = 2.5e-11
Identities = 53/165 (32%), Positives = 92/165 (55%)
Query: 603 ITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTKIKYMTEGILMREMMTD 662
+T+PRRI+ S+A RV+ E +G TVGY +R D ++D T + Y T G+L+R + +D
Sbjct: 233 VTQPRRIAAISIAERVARERGEPIGRTVGYQVRLDSRRSDD-TVLTYCTTGVLLRMLTSD 291
Query: 663 PLLRKYSVIMLDEVHERTIFTDILMGLLKKILKDKERDFECSDEIASILSLLQV-QDIFI 721
P+ + I++DE+HER I TD L+ L++ LK + D + A+I +Q+ + F
Sbjct: 292 PVASGITHIVMDEIHEREINTDYLLIALRECLKMRP-DLKVILMSATIEGNMQLFSNYFE 350
Query: 722 KPSSGALSLKARVLR-RNFEVEQGDLLTLLNIFKFYEKQENKKQF 765
S + +++R + F ++Q +L + Y+ E+K F
Sbjct: 351 NHSMDVIRIESRAFDVKVFYLDQ--ILAMTG----YQPPESKAFF 389
Score = 81 (33.6 bits), Expect = 1.5e-17, Sum P(3) = 1.5e-17
Identities = 29/121 (23%), Positives = 62/121 (51%)
Query: 702 ECSDEIASILSLLQVQDIFIKPSSGALSLKARVLRRNFEVEQGDLLT-LLNIF---KFYE 757
+C I ++++LL ++ ++ S L++++ FE+ Q DL LL I +F
Sbjct: 900 KCLTPIVNLVALLASREPYVLALSEDRDLQSKM---KFEMAQQDLSDHLLYIRLCNEFCS 956
Query: 758 KQENKK-QFCHKYFFNYKVLKRAAELKNQMILLLKKSSIPLVTSPRNTNAVLKCLTNGFF 816
K +++ QFC +F N+ ++ + Q++ L ++ + ++ R+ VL LT+ F
Sbjct: 957 KNNSQQNQFCRDHFLNFSTMRMVQGTRRQLLRELVRAKLINISPNRD---VLTVLTDHHF 1013
Query: 817 S 817
+
Sbjct: 1014 N 1014
Score = 69 (29.3 bits), Expect = 1.5e-17, Sum P(3) = 1.5e-17
Identities = 15/42 (35%), Positives = 24/42 (57%)
Query: 2 TEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILMECSRK 43
T G+L+ DP + I++D++HER I TD L+ R+
Sbjct: 280 TTGVLLRMLTSDPVASGITHIVMDEIHEREINTDYLLIALRE 321
Score = 59 (25.8 bits), Expect = 1.6e-16, Sum P(3) = 1.6e-16
Identities = 24/97 (24%), Positives = 43/97 (44%)
Query: 297 IFKMSQGKPSDSGVEPISQSYLVELSILAPGGQDVIGEDMKAFAEQLKPLKRTQLKLIIS 356
+ +M P SG+ I + E I D + + A E LK R LK+I+
Sbjct: 284 LLRMLTSDPVASGITHIVMDEIHEREI----NTDYL---LIALRECLK--MRPDLKVILM 334
Query: 357 SATVDAEEICQFYNISASSNATILSVKGHLYPVSVYY 393
SAT++ + F N + + ++ ++ + V V+Y
Sbjct: 335 SATIEGN-MQLFSNYFENHSMDVIRIESRAFDVKVFY 370
Score = 47 (21.6 bits), Expect = 4.5e-14, Sum P(3) = 4.5e-14
Identities = 10/33 (30%), Positives = 17/33 (51%)
Query: 744 GDLLTLLNIFKFYEKQENKKQFCHKYFFNYKVL 776
G L+LL + ++Y + KK CH +K +
Sbjct: 1146 GASLSLLKLDEWYNVRSVKKNLCHFLRLRHKFM 1178
>UNIPROTKB|E1BJ90 [details] [associations]
symbol:DHX34 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 InterPro:IPR015880
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00355 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 GO:GO:0005622 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 OMA:DSDQVFH GeneTree:ENSGT00700000104421
EMBL:DAAA02047415 IPI:IPI00713665 UniGene:Bt.42016
Ensembl:ENSBTAT00000008999 NextBio:20867826 Uniprot:E1BJ90
Length = 1146
Score = 225 (84.3 bits), Expect = 2.3e-17, Sum P(3) = 2.3e-17
Identities = 48/111 (43%), Positives = 71/111 (63%)
Query: 587 QYLLEAGWCYDTKLIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTK 646
QYLL AG + + T+PRRI+ SLA RV E + G VGY IRF+ T TK
Sbjct: 197 QYLLAAGCSH----VACTQPRRIACISLAKRVGFESLSQYGSQVGYQIRFES-TRSAATK 251
Query: 647 IKYMTEGILMREMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKILKDK 697
I ++T G+L+R+M +P L +Y V+++DEVHER + D L+G+L+++L +
Sbjct: 252 IVFLTVGLLLRQMQREPSLPQYQVLIVDEVHERHLHNDFLLGVLQRLLPQR 302
Score = 214 (80.4 bits), Expect = 5.1e-17, Sum P(2) = 5.1e-17
Identities = 72/257 (28%), Positives = 129/257 (50%)
Query: 273 RMDFEYISR-----GYMFRKGRMKILVSKIFKMSQGKP-SDSGVEPISQSYLVELSILAP 326
R+ FE +S+ GY R + +KI ++ G EP Y V L +
Sbjct: 223 RVGFESLSQYGSQVGYQIRFESTRSAATKIVFLTVGLLLRQMQREPSLPQYQV-LIVDEV 281
Query: 327 GGQDVIGEDMKAFAEQLKPLKRTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHL 386
+ + + + ++L P +R LK+++ SAT++ ++ NA ++ V G L
Sbjct: 282 HERHLHNDFLLGVLQRLLP-QRPDLKVVLMSATINISLFSSYFG-----NAPVVQVPGRL 335
Query: 387 YPVSVYYSN---DPVVNYVQGVVDTA-IKIHESM----PV---GDILAFVIGLEQIEHII 435
+P++V Y +P + + + +++ E++ P GD+L F+ G+ +I ++
Sbjct: 336 FPITVVYQPQEAEPTTSKSEKLDPRPFLRVLEAIDNKYPPEERGDLLVFLSGMAEISAVL 395
Query: 436 GILKQY--HNQREDLKLLILPMHGSLPNNEQIKVFRPTPRAMRKIVIATNIAETSITIPG 493
+ Y H QR ++LP+H +L +Q KVF P +RK +++TNIAETS+TI G
Sbjct: 396 EPAQAYASHTQR----WVVLPLHSALSVADQDKVFDVAPPGVRKCILSTNIAETSVTIDG 451
Query: 494 IVYVIDPGFVKARWFNP 510
I +V+D G VK ++P
Sbjct: 452 IRFVVDSGKVKEMSYDP 468
Score = 151 (58.2 bits), Expect = 3.7e-14, Sum P(3) = 3.7e-14
Identities = 35/107 (32%), Positives = 59/107 (55%)
Query: 46 RLYTEASFSQLNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRVALELL 105
RLY E+ + PE++R L + VLQ+K++ + + F F PPP +L A+ L
Sbjct: 502 RLYAESDYDAFAPYPVPEIRRVALDALVLQMKSMSVGDPRTFPFIEPPPPTSLETAILYL 561
Query: 106 YSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLLSSGSVLDSAVEIL 152
GA+D + LT P+G +A++P+ + K+L+ GS+ A +L
Sbjct: 562 RDQGALDSSEALT-PIGSLLAQLPVDVVIGKMLIL-GSMFHLAEPVL 606
Score = 87 (35.7 bits), Expect = 2.3e-17, Sum P(3) = 2.3e-17
Identities = 28/97 (28%), Positives = 48/97 (49%)
Query: 701 FECSDEIASILSLLQVQDIFIKPSSGALSLKARVLRRNFEVEQGDLLTLLNIFKFY---- 756
F ++ + +I + L VQ F + S + + RR E +QGD TLLN+F +
Sbjct: 599 FHLAEPVLTIAAALSVQTPFTR--SAQSNPECAATRRPLESDQGDPFTLLNVFNTWVQVK 656
Query: 757 -EKQENKKQFC-HKYFFNYKVLKRAAELKNQMILLLK 791
E+ N +++C H+ ++ L A L+ Q LL+
Sbjct: 657 SERGRNSRKWCRHRGIEEHR-LYEMANLRRQFKELLE 692
Score = 85 (35.0 bits), Expect = 3.7e-14, Sum P(3) = 3.7e-14
Identities = 14/38 (36%), Positives = 26/38 (68%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILM 38
+T G+L+ +PS+ +Y V+++D+VHER + D L+
Sbjct: 255 LTVGLLLRQMQREPSLPQYQVLIVDEVHERHLHNDFLL 292
Score = 39 (18.8 bits), Expect = 2.3e-17, Sum P(3) = 2.3e-17
Identities = 9/35 (25%), Positives = 16/35 (45%)
Query: 317 YLVELSILAPGGQDVIGEDMKAFAEQLKPLKRTQL 351
Y + LS+L P +D G + E+ ++ L
Sbjct: 104 YRINLSVLGPDARDSRGPGRRLPPERASEFRQALL 138
>ZFIN|ZDB-GENE-061207-30 [details] [associations]
symbol:dhx34 "DEAH (Asp-Glu-Ala-His) box polypeptide
34" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=IMP] [GO:0009790 "embryo
development" evidence=IMP] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR015880
Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194 SMART:SM00355
SMART:SM00490 SMART:SM00847 ZFIN:ZDB-GENE-061207-30 GO:GO:0005524
GO:GO:0000184 GO:GO:0008270 GO:GO:0003676 GO:GO:0005622
GO:GO:0009790 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
CTD:9704 HOGENOM:HOG000232193 OMA:DSDQVFH OrthoDB:EOG4GB75B
GeneTree:ENSGT00700000104421 HOVERGEN:HBG051355 EMBL:BX908775
IPI:IPI00503372 RefSeq:NP_001121805.1 UniGene:Dr.50626
Ensembl:ENSDART00000086943 GeneID:555838 KEGG:dre:555838
InParanoid:A2BIE5 NextBio:20881188 Uniprot:A2BIE5
Length = 1150
Score = 214 (80.4 bits), Expect = 3.9e-13, Sum P(3) = 3.9e-13
Identities = 48/108 (44%), Positives = 68/108 (62%)
Query: 587 QYLLEAGWCYDTKLIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTK 646
QYLL +G I T+PRRI+ SLA RVS E G VGY IRF+ T TK
Sbjct: 197 QYLLASG----INNIACTQPRRIACISLAKRVSFESLNQYGSKVGYQIRFETSRTL-ATK 251
Query: 647 IKYMTEGILMREMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKIL 694
+ ++TEG+L+R++ D L +Y V+++DEVHER + D L+G+L+ +L
Sbjct: 252 LLFLTEGLLLRQIQQDASLGQYQVLIVDEVHERHLHCDFLLGVLRSLL 299
Score = 212 (79.7 bits), Expect = 2.3e-17, Sum P(4) = 2.3e-17
Identities = 62/190 (32%), Positives = 99/190 (52%)
Query: 348 RTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYYSNDPVVNYVQGV-- 405
R L+L++ SAT++ + ++N +A +L V G L+P+ V Y P V
Sbjct: 302 RPDLRLVLMSATINIKLFSSYFN-----DAPVLQVPGRLFPIQVIYQPIPPEEQVSRSEK 356
Query: 406 VDTA--IKIHESM----PV---GDILAFVIGLEQIEHIIGILKQY--HNQREDLKLLILP 454
+D +++ + + P GD+L F+ G+ +I I + Y H QR ++LP
Sbjct: 357 LDPRPYLRVLQGIDQRYPQEERGDLLLFLSGVAEISTIQEACQTYATHTQR----WIVLP 412
Query: 455 MHGSLPNNEQIKVFRPTPRAMRKIVIATNIAETSITIPGIVYVIDPGFVKARWFNPNTLT 514
+H +L +Q KVF P +RK +I+TNIAETS+TI G+ +V+D G VK F+P
Sbjct: 413 LHSTLSLAQQDKVFDIAPPGVRKCIISTNIAETSVTIDGVRFVVDSGKVKEMSFDPKAKM 472
Query: 515 NSLVVVPISK 524
L IS+
Sbjct: 473 QRLQEFWISR 482
Score = 169 (64.5 bits), Expect = 8.8e-13, Sum P(4) = 8.8e-13
Identities = 36/107 (33%), Positives = 63/107 (58%)
Query: 46 RLYTEASFSQLNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRVALELL 105
RLY+E+ + PE+ R L S +LQ+K++G+ + F+F PPPA +++ A+ L
Sbjct: 502 RLYSESDYDAFAPYPVPEIHRVALDSLILQMKSMGLGDPRTFTFIDPPPASSIQTAVTYL 561
Query: 106 YSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLLSSGSVLDSAVEIL 152
GA+D +G LT +G +A++P+ + K+L+ GSV + +L
Sbjct: 562 REQGALDEHGELTS-IGRLLAQLPVDVVIGKMLVL-GSVFNLVEPVL 606
Score = 87 (35.7 bits), Expect = 2.3e-17, Sum P(4) = 2.3e-17
Identities = 17/47 (36%), Positives = 28/47 (59%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILMECSRKFSRL 47
+TEG+L+ D S+ +Y V+++D+VHER + D L+ R L
Sbjct: 255 LTEGLLLRQIQQDASLGQYQVLIVDEVHERHLHCDFLLGVLRSLLSL 301
Score = 54 (24.1 bits), Expect = 2.3e-17, Sum P(4) = 2.3e-17
Identities = 19/100 (19%), Positives = 40/100 (40%)
Query: 701 FECSDEIASILSLLQVQDIFIKPSSGALSLKARVLRRNFEVEQGDLLTLLNIFKFY---- 756
F + + ++ + L VQ F++ S + R+ GD TL+N F +
Sbjct: 599 FNLVEPVLTVAAALSVQSPFLR--SAQHNPDCSTARQPLNSNHGDPFTLMNTFNAWVQVK 656
Query: 757 -EKQENKKQFCHKYFFNYKVLKRAAELKNQMILLLKKSSI 795
++ +++C + + L L+ Q LL+ +
Sbjct: 657 ADRGSGSRKWCRRRGLEEQRLYEMVNLRRQFKELLRSHGL 696
Score = 42 (19.8 bits), Expect = 2.3e-17, Sum P(4) = 2.3e-17
Identities = 12/39 (30%), Positives = 19/39 (48%)
Query: 818 NAAYLHYSGVYRTVRGNEDLYIHPSSVLYTLQQPQCTHL 856
NA V+ T R + + IHP+SV + P+ H+
Sbjct: 828 NATRKDSDQVFHT-RNKQGVVIHPTSVFAS--DPEVLHV 863
>UNIPROTKB|F1RLY9 [details] [associations]
symbol:DHX34 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 InterPro:IPR015880
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00355 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 GO:GO:0005622 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 CTD:9704 OMA:DSDQVFH GeneTree:ENSGT00700000104421
EMBL:FP102420 RefSeq:XP_003127294.1 Ensembl:ENSSSCT00000003454
GeneID:100515780 KEGG:ssc:100515780 Uniprot:F1RLY9
Length = 1146
Score = 221 (82.9 bits), Expect = 4.4e-14, Sum P(3) = 4.4e-14
Identities = 47/108 (43%), Positives = 70/108 (64%)
Query: 587 QYLLEAGWCYDTKLIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTK 646
QYLL AG+ + + T+PRRI+ SLA RV E + G VGY IRF+ T TK
Sbjct: 197 QYLLAAGFSH----VACTQPRRIACISLAKRVGLESLSQYGSQVGYQIRFES-TRSAATK 251
Query: 647 IKYMTEGILMREMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKIL 694
I ++T G+L+R + +P L +Y V+++DEVHER + D L+G+L+++L
Sbjct: 252 IVFLTVGLLLRHVQREPTLPQYRVLIVDEVHERHLHNDFLLGVLQRLL 299
Score = 212 (79.7 bits), Expect = 5.3e-17, Sum P(3) = 5.3e-17
Identities = 59/181 (32%), Positives = 101/181 (55%)
Query: 341 EQLKPLKRTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYYSN---DP 397
++L P +R LK+I+ SATV+ ++ A ++ V G L+P++V Y +P
Sbjct: 296 QRLLP-RRPDLKVILMSATVNTSLFSAYFG-----QAPVVQVPGRLFPITVVYQPQEAEP 349
Query: 398 VVNYVQGVVDTA-IKIHESM----PV---GDILAFVIGLEQIEHIIGILKQYHNQREDLK 449
+ ++ + I++ E++ P GD+L F+ GL +I ++ Q H +R +
Sbjct: 350 TASTLEKLDPRPFIRVLEAIDSKYPPEERGDLLVFLSGLAEIGAVLEAA-QAHARRSG-R 407
Query: 450 LLILPMHGSLPNNEQIKVFRPTPRAMRKIVIATNIAETSITIPGIVYVIDPGFVKARWFN 509
++LP+H +L Q KVF P +RK +++TNIAETS+TI GI +V+D G VK ++
Sbjct: 408 WVVLPLHSTLSVAAQDKVFDVAPPGVRKCILSTNIAETSVTIDGIRFVVDSGKVKEMSYD 467
Query: 510 P 510
P
Sbjct: 468 P 468
Score = 160 (61.4 bits), Expect = 1.9e-11, Sum P(3) = 1.9e-11
Identities = 38/107 (35%), Positives = 61/107 (57%)
Query: 46 RLYTEASFSQLNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRVALELL 105
RLY E+ + PE++R L + VLQ+K++ + + F F PPPA +L A+ L
Sbjct: 502 RLYAESDYDAFAPYPVPEIRRVALDALVLQMKSMSVGDPRTFPFIEPPPAASLETAILYL 561
Query: 106 YSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLLSSGSVLDSAVEIL 152
GA+D + LT P+G +A++P+ + K+L+ GSVL A +L
Sbjct: 562 RDQGALDGSEALT-PIGSLLAQLPVDIVIGKMLVL-GSVLHLAEPVL 606
Score = 82 (33.9 bits), Expect = 5.3e-17, Sum P(3) = 5.3e-17
Identities = 13/38 (34%), Positives = 27/38 (71%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILM 38
+T G+L+ + +P++ +Y V+++D+VHER + D L+
Sbjct: 255 LTVGLLLRHVQREPTLPQYRVLIVDEVHERHLHNDFLL 292
Score = 54 (24.1 bits), Expect = 5.3e-17, Sum P(3) = 5.3e-17
Identities = 21/93 (22%), Positives = 39/93 (41%)
Query: 704 SDEIASILSLLQVQDIFIKPSSGALSLKARVLRRNFEVEQGDLLTLLNIFKFY-----EK 758
++ + +I + L VQ F + + R L E + GD TL N+F + ++
Sbjct: 602 AEPVLTIAAALSVQSPFTRSTRSNPKCAWRAL----ESDHGDPFTLFNVFNNWVQVKSDR 657
Query: 759 QENKKQFCHKYFFNYKVLKRAAELKNQMILLLK 791
+++C + L A L+ Q LL+
Sbjct: 658 STKSRRWCRREGIEEHRLYEMANLRRQFKELLE 690
Score = 44 (20.5 bits), Expect = 4.4e-14, Sum P(3) = 4.4e-14
Identities = 9/17 (52%), Positives = 10/17 (58%)
Query: 317 YLVELSILAPGGQDVIG 333
Y + LSIL P QD G
Sbjct: 104 YRINLSILGPDAQDARG 120
>UNIPROTKB|E2QX71 [details] [associations]
symbol:DHX57 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000571
InterPro:IPR001650 InterPro:IPR006575 InterPro:IPR007502
InterPro:IPR009060 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00642 Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103
PROSITE:PS51194 SMART:SM00356 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0008270 GO:GO:0003676 InterPro:IPR015940
SMART:SM00165 PROSITE:PS50030 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 SUPFAM:SSF46934 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00550000074257 CTD:90957 KO:K13026
OMA:RAYKGWQ EMBL:AAEX03010868 RefSeq:XP_540155.1
Ensembl:ENSCAFT00000010087 GeneID:483040 KEGG:cfa:483040
Uniprot:E2QX71
Length = 1382
Score = 182 (69.1 bits), Expect = 8.0e-17, Sum P(5) = 8.0e-17
Identities = 50/175 (28%), Positives = 84/175 (48%)
Query: 402 VQGVVDTAIKIHESMPVGDILAFVIGLEQIEHIIGILKQ--YHNQREDLKLLILPMHGSL 459
++ +++ + S P G IL F+ GL +I+ + L+ N R + ++ P+H SL
Sbjct: 827 IEALLEWIVDGKHSYPPGAILVFLPGLAEIKMLYEQLQSNSLFNNRRSHRCVVHPLHSSL 886
Query: 460 PNNEQIKVFRPTPRAMRKIVIATNIAETSITIPGIVYVIDPGFVKARWFNPNTLTNSLVV 519
+ EQ VF P + KI+I+TNIAETSITI +VYVID G +K + ++ + SL
Sbjct: 887 SSEEQQAVFVKPPVGVTKIIISTNIAETSITIDDVVYVIDSGKMKEKRYDASKGMESLED 946
Query: 520 VPISKXXXXXXXXXXXXXXXXHVYRKNFMYNRLFIHFCVSRNIPTIPNDPKDVKC 574
+S+ + + + F H + + +P I P + C
Sbjct: 947 TFVSQANALQRKGRAGRVASGVCF--HLFTSHHFNHQLLKQQLPEIQRVPLEQLC 999
Score = 176 (67.0 bits), Expect = 1.6e-10, Sum P(3) = 1.6e-10
Identities = 39/91 (42%), Positives = 59/91 (64%)
Query: 604 TEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTKIKYMTEGILMREMMTDP 663
T+PRRIS S+A RV++E +G TVGY IR + + T++ Y T G+L+R + D
Sbjct: 595 TQPRRISAISVAERVAKERTERVGLTVGYQIRLESVKSS-ATRLLYCTTGVLLRRLEGDT 653
Query: 664 LLRKYSVIMLDEVHERTIFTDILMGLLKKIL 694
L+ + I++DEVHERT +D L+ +LK I+
Sbjct: 654 SLQGVTHIIVDEVHERTEESDFLLLVLKDIV 684
Score = 99 (39.9 bits), Expect = 4.2e-05, Sum P(4) = 4.2e-05
Identities = 39/114 (34%), Positives = 59/114 (51%)
Query: 47 LYTEASFS-QLNECTPPEMQRTELSSAVLQLKALGI---HNILR-FS-FPSPPPAQNLRV 100
L+T F+ QL + PE+QR L L++K L + HN+ FS PP +LR
Sbjct: 972 LFTSHHFNHQLLKQQLPEIQRVPLEQLCLRIKILEMFSTHNLQSVFSRLIEPPHTDSLRA 1031
Query: 101 ALELLYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLLSSGSV---LDSAVEI 151
+ L LGA+ + LT P+G +A +P+ K++L GS+ LD A+ I
Sbjct: 1032 SKIRLRDLGALTPDEKLT-PLGYHLASLPVDVRIGKLMLF-GSIFRCLDPALTI 1083
Score = 74 (31.1 bits), Expect = 8.0e-17, Sum P(5) = 8.0e-17
Identities = 25/95 (26%), Positives = 40/95 (42%)
Query: 701 FECSDEIASILSLLQVQDIFIKPSSGALSLKARVLRRNFEVEQGDLLTLLNIFKFYE--K 758
F C D +I + L + F+ P + L F D L LL +K ++
Sbjct: 1074 FRCLDPALTIAASLAFKSPFVSPWDKKEEANQKKLE--FAFANSDYLALLRAYKGWQLSM 1131
Query: 759 QENKK---QFCHKYFFNYKVLKRAAELKNQMILLL 790
+E + +C + F + +VL+ A LK Q LL
Sbjct: 1132 KEGMRASYNYCRQNFLSGRVLQEMASLKRQFTELL 1166
Score = 73 (30.8 bits), Expect = 8.0e-17, Sum P(5) = 8.0e-17
Identities = 17/59 (28%), Positives = 34/59 (57%)
Query: 346 LKRTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYYSNDP--VVNYV 402
L+R L++I+ SAT++AE +++ S+ ++++ G +PV ++ D V YV
Sbjct: 685 LQRPNLQVILMSATLNAELFSEYF-----SSCPVITIPGRTFPVDQFFLEDAIAVTRYV 738
Score = 69 (29.3 bits), Expect = 8.0e-17, Sum P(5) = 8.0e-17
Identities = 14/37 (37%), Positives = 25/37 (67%)
Query: 2 TEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILM 38
T G+L+ + D S++ + I++D+VHERT +D L+
Sbjct: 641 TTGVLLRRLEGDTSLQGVTHIIVDEVHERTEESDFLL 677
Score = 42 (19.8 bits), Expect = 2.5e-07, Sum P(3) = 2.5e-07
Identities = 15/69 (21%), Positives = 32/69 (46%)
Query: 694 LKDKERDFECS-DEIASILSLLQVQDIFIKPSSGA--LSLKARVLRRNFEVEQGDLLTLL 750
L + R C + S LS + Q +F+KP G + + + + ++ D++ ++
Sbjct: 868 LFNNRRSHRCVVHPLHSSLSSEEQQAVFVKPPVGVTKIIISTNIAETSITID--DVVYVI 925
Query: 751 NIFKFYEKQ 759
+ K EK+
Sbjct: 926 DSGKMKEKR 934
Score = 39 (18.8 bits), Expect = 8.0e-17, Sum P(5) = 8.0e-17
Identities = 7/13 (53%), Positives = 11/13 (84%)
Query: 837 LYIHPSSVLYTLQ 849
++IHPSSV Y ++
Sbjct: 1258 VHIHPSSVNYQVR 1270
Score = 38 (18.4 bits), Expect = 1.7e-13, Sum P(4) = 1.7e-13
Identities = 12/40 (30%), Positives = 21/40 (52%)
Query: 772 NYKVLKRAAELKNQMILLL----KKSSIPLVTSPRNTNAV 807
+++V + EL+ ++ LL K SI L T PR + +
Sbjct: 1333 SHQVAELVKELRCELDQLLQDKIKNPSIDLCTCPRGSRII 1372
>MGI|MGI:2136388 [details] [associations]
symbol:Dqx1 "DEAQ RNA-dependent ATPase" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006200 "ATP catabolic
process" evidence=ISA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISA]
InterPro:IPR001650 InterPro:IPR007502 Pfam:PF04408 PROSITE:PS51194
SMART:SM00847 MGI:MGI:2136388 GO:GO:0005524 GO:GO:0005634
GO:GO:0003676 GO:GO:0016887 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 HOGENOM:HOG000175261 GeneTree:ENSGT00650000093246
HOVERGEN:HBG039428 CTD:165545 KO:K14433 OMA:CGQAVQA
OrthoDB:EOG4548Z3 EMBL:AF318278 EMBL:BC048936 EMBL:BC075680
IPI:IPI00125675 IPI:IPI00844713 RefSeq:NP_291084.1
UniGene:Mm.140332 ProteinModelPortal:Q924H9 SMR:Q924H9
PhosphoSite:Q924H9 PRIDE:Q924H9 Ensembl:ENSMUST00000077502
GeneID:93838 KEGG:mmu:93838 UCSC:uc009cmc.1 UCSC:uc009cmd.1
InParanoid:Q924H9 NextBio:351693 Bgee:Q924H9 CleanEx:MM_DQX1
Genevestigator:Q924H9 Uniprot:Q924H9
Length = 718
Score = 174 (66.3 bits), Expect = 1.1e-16, Sum P(2) = 1.1e-16
Identities = 35/105 (33%), Positives = 68/105 (64%)
Query: 587 QYLLEAGWCYDTKLIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTK 646
++ L G + T + +T+P ++ SLA+RV++E+ TLGH +GY+I +DCT + T
Sbjct: 83 EFALARG--FQTGQVTVTQPYPLAAMSLASRVADEMDLTLGHEIGYSIPQEDCTGPN-TM 139
Query: 647 IKYMTEGILMREMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLK 691
+++ + + ++E+ + +SV++LDE ER++ +D+L GLL+
Sbjct: 140 LRFCWDRLFLQEVASTRGPGAWSVLILDEAQERSVASDLLQGLLR 184
Score = 120 (47.3 bits), Expect = 1.1e-16, Sum P(2) = 1.1e-16
Identities = 35/136 (25%), Positives = 67/136 (49%)
Query: 689 LLKKILKDKERDFECSDEIASILSLLQVQDIFIKPSSGALSLKARVLRRNFEVEQGDLLT 748
L K +L E F C DE+ ++ ++L F +P LS LRR E GD +
Sbjct: 474 LAKALLASCE--FNCVDEMLTLAAMLTAAPGFTRPP---LSAGEAALRRALEHADGDHSS 528
Query: 749 LLNIFKFYEKQENKKQFCHKYFFNYKVLKRAAELKNQMILLLKKSSIPLVT----SPRNT 804
L+ +++ + + + +C N++ L +A +L+ +++ L+++ +PL S +N
Sbjct: 529 LIQVYEAFVQSGADEAWCQARGLNWESLCQARKLRAELVELMQRIELPLSQPAFGSEQNR 588
Query: 805 NAVLKCLTNGFFSNAA 820
+ K L +G+F A
Sbjct: 589 RDLQKALLSGYFLKVA 604
Score = 107 (42.7 bits), Expect = 5.7e-10, Sum P(3) = 5.7e-10
Identities = 39/143 (27%), Positives = 64/143 (44%)
Query: 388 PVSVYYSNDPVVNYVQGVVDTAIKI--HESMPVGDILAFVIGLEQI----EHIIGILKQY 441
P Y P + V+ +++ E P GD+L ++ E+I E + G +
Sbjct: 229 PTLAYKDTVPT-DLVEAACQAVLELCQQEEAP-GDVLVYLPSEEEISLCCESLSGEMGTL 286
Query: 442 HNQREDLKLLILPMHGSLPNNEQIKVFRPTPRAMRKIVIATNIAETSITIPGIVYVIDPG 501
+ +LP+H Q V+ T ++RKIV+ +A+ S ++P I +VID G
Sbjct: 287 AVPGPPPR--VLPLHPGCAQAIQT-VYEDTDVSVRKIVVTHWLADFSFSLPSIQHVIDSG 343
Query: 502 FVKARWFNPNTLTNSLVVVPISK 524
+NP S V+ PISK
Sbjct: 344 LELRSVYNPRIRAESQVLRPISK 366
Score = 86 (35.3 bits), Expect = 7.3e-08, Sum P(3) = 7.3e-08
Identities = 33/97 (34%), Positives = 48/97 (49%)
Query: 46 RLYTEASFSQLNECTP-PEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRVALEL 104
RLY++++ P P++ LSS VL L I F P + L ALE
Sbjct: 386 RLYSKSTLELEAPPLPHPKVCEENLSSLVLLLMRKQIAEPGECHFLDRPAPEALMRALED 445
Query: 105 LYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLLSS 141
L L A++ +G L+ +G ++E PL P AK LL+S
Sbjct: 446 LDYLAALNDDGELSD-LGVILSEFPLPPELAKALLAS 481
Score = 49 (22.3 bits), Expect = 5.7e-10, Sum P(3) = 5.7e-10
Identities = 8/19 (42%), Positives = 16/19 (84%)
Query: 19 YSVIMLDKVHERTIFTDIL 37
+SV++LD+ ER++ +D+L
Sbjct: 161 WSVLILDEAQERSVASDLL 179
>UNIPROTKB|E1B9N7 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005739 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 OMA:WLLYQEK GeneTree:ENSGT00550000074257
EMBL:DAAA02050346 IPI:IPI00907457 Ensembl:ENSBTAT00000013897
ArrayExpress:E1B9N7 Uniprot:E1B9N7
Length = 1367
Score = 179 (68.1 bits), Expect = 7.2e-11, Sum P(3) = 7.2e-11
Identities = 41/99 (41%), Positives = 62/99 (62%)
Query: 604 TEPRRISVTSLANRVSEELRTTLG-----HTVGYTIRFDDCTTEDVTKIKYMTEGILMRE 658
T+PRRIS SLA RV +EL G GY IR + +E T++ Y T G+L+R+
Sbjct: 625 TQPRRISAVSLATRVCDELGCENGPGGKNSLCGYQIRMESRASES-TRLLYCTTGVLLRK 683
Query: 659 MMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKILKDK 697
+ D LL S +++DEVHER++ +D L+ +LK+IL+ +
Sbjct: 684 LQEDGLLTNVSHVIVDEVHERSVQSDFLLIILKEILQKR 722
Score = 173 (66.0 bits), Expect = 1.1e-16, Sum P(5) = 1.1e-16
Identities = 46/156 (29%), Positives = 73/156 (46%)
Query: 419 GDILAFVIGLEQIEHIIGILKQYHNQREDLKLLILPMHGSLPNNEQIKVFRPTPRAMRKI 478
G +L F+ GL I+ + +L + + ++ +H L +Q F P+ +RKI
Sbjct: 865 GAVLIFLPGLAHIQQLYDLLSTDRRFFSE-RYKVIALHSILSTQDQAAAFTLPPQGVRKI 923
Query: 479 VIATNIAETSITIPGIVYVIDPGFVKARWFNPNTLTNSLVVVPISKXXXXXXXXXXXXXX 538
V+ATNIAET ITIP +V+VID G K ++ ++ +SLV +SK
Sbjct: 924 VLATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQGRAGRVR 983
Query: 539 XXHVYRKNFMYNRLFIHFCVSRNIPTIPNDPKDVKC 574
+R MY R + ++P I P + C
Sbjct: 984 DGFCFR---MYTRERFEGFMDYSVPEILRVPLEELC 1016
Score = 92 (37.4 bits), Expect = 0.00048, Sum P(4) = 0.00048
Identities = 25/96 (26%), Positives = 46/96 (47%)
Query: 46 RLYTEASFSQLNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPS--PPPAQNLRVALE 103
R+YT F + + PE+ R L L + + + F + PP Q + A+
Sbjct: 989 RMYTRERFEGFMDYSVPEILRVPLEELCLHIMKCNLGSPEDFLSKALDPPQLQVISNAMN 1048
Query: 104 LLYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLL 139
LL +GA ++N P+G+ +A +P++ K+L+
Sbjct: 1049 LLRKIGACELNEPKLTPLGQHLAALPVNVKIGKMLI 1084
Score = 85 (35.0 bits), Expect = 1.1e-16, Sum P(5) = 1.1e-16
Identities = 19/50 (38%), Positives = 29/50 (58%)
Query: 347 KRTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYYSND 396
KR+ L LI+ SATVD E+ ++ ++ IL + G YPV V++ D
Sbjct: 721 KRSDLHLILMSATVDCEKFSTYF-----THCPILRISGRSYPVEVFHLED 765
Score = 75 (31.5 bits), Expect = 1.1e-16, Sum P(5) = 1.1e-16
Identities = 25/97 (25%), Positives = 48/97 (49%)
Query: 701 FECSDEIASILSLLQVQDIFIKPSSGALSLKARVLRRNFEVEQGDLLTLLNIFKFYEK-- 758
F C D +A++ +++ + FI P G +A + + + D LT+ N + ++K
Sbjct: 1089 FGCLDPVATLAAVMTEKSPFITPI-GRKD-EADLAKSALAMADSDHLTIYNAYLGWKKAR 1146
Query: 759 QE----NKKQFCHKYFFNYKVLKRAAELKNQMILLLK 791
QE ++ +C K F N L ++K ++I L+K
Sbjct: 1147 QEGGYRSEIAYCRKNFLNRTSLLTLEDVKQELIKLVK 1183
Score = 65 (27.9 bits), Expect = 1.1e-16, Sum P(5) = 1.1e-16
Identities = 12/37 (32%), Positives = 23/37 (62%)
Query: 2 TEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILM 38
T G+L+ D + S +++D+VHER++ +D L+
Sbjct: 676 TTGVLLRKLQEDGLLTNVSHVIVDEVHERSVQSDFLL 712
Score = 38 (18.4 bits), Expect = 1.1e-16, Sum P(5) = 1.1e-16
Identities = 17/55 (30%), Positives = 24/55 (43%)
Query: 806 AVLKC-LTNGFFSNAAYLHYSG----------VYRTVRGNEDLYIHPSSVLYTLQ 849
A+LK LT G + N + Y+ + T +G +HPSSV LQ
Sbjct: 1211 ALLKAVLTAGLYDNVGKIIYTKSVDITEKLACIVETAQGKAQ--VHPSSVNRDLQ 1263
>UNIPROTKB|Q3ZBE0 [details] [associations]
symbol:DQX1 "ATP-dependent RNA helicase DQX1" species:9913
"Bos taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] InterPro:IPR007502 Pfam:PF04408 PROSITE:PS51194
SMART:SM00847 GO:GO:0005524 GO:GO:0005634 GO:GO:0004386
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
HOGENOM:HOG000175261 GeneTree:ENSGT00650000093246
HOVERGEN:HBG039428 EMBL:BC103411 IPI:IPI00704154
RefSeq:NP_001030399.1 UniGene:Bt.49583 PRIDE:Q3ZBE0
Ensembl:ENSBTAT00000033191 GeneID:517947 KEGG:bta:517947 CTD:165545
InParanoid:Q3ZBE0 KO:K14433 OMA:CGQAVQA OrthoDB:EOG4548Z3
NextBio:20872543 Uniprot:Q3ZBE0
Length = 719
Score = 169 (64.5 bits), Expect = 1.1e-16, Sum P(2) = 1.1e-16
Identities = 36/105 (34%), Positives = 66/105 (62%)
Query: 587 QYLLEAGWCYDTKLIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTK 646
+++L G + + +T+P ++ SLA RV++E+ TLGH VGY+I +DCT D T
Sbjct: 86 EFVLARG--FQKGWVTVTQPYPLAALSLALRVADEMDLTLGHEVGYSIPQEDCTGPD-TL 142
Query: 647 IKYMTEGILMREMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLK 691
+++ + +L++E+ + V++LDE ER++ +D+L GLL+
Sbjct: 143 LRFCWDRLLLQEVASTRGTGARGVLILDEAQERSVASDLLQGLLR 187
Score = 125 (49.1 bits), Expect = 1.1e-16, Sum P(2) = 1.1e-16
Identities = 36/136 (26%), Positives = 67/136 (49%)
Query: 689 LLKKILKDKERDFECSDEIASILSLLQVQDIFIKPSSGALSLKARVLRRNFEVEQGDLLT 748
L K +L E F+C DE+ ++ ++L F +P A + LRR E GD +
Sbjct: 476 LAKALLASCE--FDCVDEMLTLAAMLTAAPGFTRPPVCA---EEAALRRALEHVDGDHSS 530
Query: 749 LLNIFKFYEKQENKKQFCHKYFFNYKVLKRAAELKNQMILLLKKSSIPLVT----SPRNT 804
L+ +++ + + K +C N+ L +A +L+ +++ L+++ +PL S RN
Sbjct: 531 LIQVYEAFIQSGADKAWCQARGLNWAALCQARKLRGELLELMQRIELPLSQPAFGSERNR 590
Query: 805 NAVLKCLTNGFFSNAA 820
+ K L +G+F A
Sbjct: 591 RDLQKALVSGYFLKVA 606
Score = 112 (44.5 bits), Expect = 2.1e-10, Sum P(3) = 2.1e-10
Identities = 38/142 (26%), Positives = 64/142 (45%)
Query: 388 PVSVYYSNDPVVNYVQGVVDTAIK-IHESMPVGDILAFVIGLEQI----EHIIGILKQYH 442
P VY + P + V ++ E P GD+L ++ E+I E + ++
Sbjct: 232 PTPVYRDSLPA-DRVDAACQAVLEWCQEEAP-GDVLVYLPSEEEISLCCESLSRKVRSLE 289
Query: 443 NQREDLKLLILPMHGSLPNNEQIKVFRPTPRAMRKIVIATNIAETSITIPGIVYVIDPGF 502
NQ + +LP+H Q V+ T RK+V+ +A+ S ++P I +VID G
Sbjct: 290 NQGPPPR--VLPLHPGCGQAVQA-VYEDTESGARKVVVTHWLADFSFSLPSIRHVIDSGL 346
Query: 503 VKARWFNPNTLTNSLVVVPISK 524
++P S V+ P+SK
Sbjct: 347 ELRSVYSPQIRAESQVLRPVSK 368
Score = 92 (37.4 bits), Expect = 2.2e-08, Sum P(3) = 2.2e-08
Identities = 36/97 (37%), Positives = 50/97 (51%)
Query: 47 LYTEASFSQLNE-CTP-PEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRVALEL 104
LY + SF +L P P + LSS +L LK I + F P + L ALE
Sbjct: 389 LYPK-SFLELEAPYLPQPRVWAENLSSLMLLLKRRQIAEPGKCHFLDRPAPEALMQALED 447
Query: 105 LYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLLSS 141
L L A+D +G+L+ +G ++E PL P AK LL+S
Sbjct: 448 LDYLAALDDDGDLSD-LGVILSEFPLAPELAKALLAS 483
Score = 43 (20.2 bits), Expect = 2.1e-10, Sum P(3) = 2.1e-10
Identities = 7/17 (41%), Positives = 14/17 (82%)
Query: 21 VIMLDKVHERTIFTDIL 37
V++LD+ ER++ +D+L
Sbjct: 166 VLILDEAQERSVASDLL 182
>RGD|2318361 [details] [associations]
symbol:Dhx29 "DEAH (Asp-Glu-Ala-His) box polypeptide 29"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=ISO] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 RGD:2318361
GO:GO:0005739 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 OrthoDB:EOG43FGW2 GeneTree:ENSGT00550000074257
IPI:IPI00372028 Ensembl:ENSRNOT00000013854 Uniprot:D3ZHW0
Length = 1366
Score = 181 (68.8 bits), Expect = 2.8e-11, Sum P(3) = 2.8e-11
Identities = 42/99 (42%), Positives = 62/99 (62%)
Query: 604 TEPRRISVTSLANRVSEELRTTLG-----HTVGYTIRFDDCTTEDVTKIKYMTEGILMRE 658
T+PRRIS SLA RV EEL G GY IR + +E T++ Y T G+L+R+
Sbjct: 628 TQPRRISAVSLATRVCEELGCEGGPGGRNSLCGYQIRMESRASES-TRLLYCTTGVLLRK 686
Query: 659 MMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKILKDK 697
+ D LL S +++DEVHER++ +D L+ +LK+IL+ +
Sbjct: 687 LQEDGLLADVSHVIVDEVHERSVQSDFLLVILKEILQKR 725
Score = 172 (65.6 bits), Expect = 1.5e-16, Sum P(4) = 1.5e-16
Identities = 47/159 (29%), Positives = 77/159 (48%)
Query: 419 GDILAFVIGLEQIEHIIGIL---KQYHNQREDLKLLILPMHGSLPNNEQIKVFRPTPRAM 475
G +L F+ GL I+ + +L ++++++R L + +H L +Q F P +
Sbjct: 868 GAVLIFLPGLAHIQQLYDLLSNDRRFYSERYQL----IALHSVLSTQDQAAAFMLPPPGV 923
Query: 476 RKIVIATNIAETSITIPGIVYVIDPGFVKARWFNPNTLTNSLVVVPISKXXXXXXXXXXX 535
RKIV+ATNIAET ITIP +V+VID G K ++ ++ +SLV +SK
Sbjct: 924 RKIVLATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQGRAG 983
Query: 536 XXXXXHVYRKNFMYNRLFIHFCVSRNIPTIPNDPKDVKC 574
+R +Y R + ++P I P + C
Sbjct: 984 RVRDGFCFR---LYTRERFEGFLEYSVPEILRVPLEELC 1019
Score = 88 (36.0 bits), Expect = 0.00079, Sum P(3) = 0.00079
Identities = 27/96 (28%), Positives = 43/96 (44%)
Query: 46 RLYTEASFSQLNECTPPEMQRTELSSAVLQLKA--LGIHNILRFSFPSPPPAQNLRVALE 103
RLYT F E + PE+ R L L + LG PP Q + A+
Sbjct: 992 RLYTRERFEGFLEYSVPEILRVPLEELCLHIMKCDLGSPEDFLSKALDPPQPQVISNAMN 1051
Query: 104 LLYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLL 139
LL +GA + + P+G+ +A +P++ K+L+
Sbjct: 1052 LLRKIGACEPSEPKLTPLGQHLAALPVNVKIGKMLI 1087
Score = 84 (34.6 bits), Expect = 1.5e-16, Sum P(4) = 1.5e-16
Identities = 19/52 (36%), Positives = 31/52 (59%)
Query: 347 KRTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYYSNDPV 398
KR+ L LI+ SATVD+++ ++ ++ IL + G YPV V++ D V
Sbjct: 724 KRSDLHLILMSATVDSDKFSTYF-----THCPILRISGRSYPVEVFHLEDIV 770
Score = 73 (30.8 bits), Expect = 1.5e-16, Sum P(4) = 1.5e-16
Identities = 24/106 (22%), Positives = 52/106 (49%)
Query: 701 FECSDEIASILSLLQVQDIFIKPSSGALSLKARVLRRNFEVEQGDLLTLLNIFKFYEK-- 758
F C + +A++ +++ + FI P G +A + + + V D LT+ N + ++K
Sbjct: 1092 FGCLEPVATLAAVMTEKSPFITPI-GRKD-EADLAKSSLAVADSDHLTIYNAYLGWKKAQ 1149
Query: 759 QE----NKKQFCHKYFFNYKVLKRAAELKNQMILLLKKSSIPLVTS 800
QE ++ +C + F N L ++K +++ L++ + TS
Sbjct: 1150 QEGGFRSEISYCQRNFLNRTSLLTLEDVKQELMKLVRAAGFSSSTS 1195
Score = 64 (27.6 bits), Expect = 1.5e-16, Sum P(4) = 1.5e-16
Identities = 12/37 (32%), Positives = 23/37 (62%)
Query: 2 TEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILM 38
T G+L+ D + S +++D+VHER++ +D L+
Sbjct: 679 TTGVLLRKLQEDGLLADVSHVIVDEVHERSVQSDFLL 715
Score = 42 (19.8 bits), Expect = 2.8e-11, Sum P(3) = 2.8e-11
Identities = 9/27 (33%), Positives = 15/27 (55%)
Query: 421 ILAFVIGLEQIEHIIGILKQYHNQRED 447
IL VI + + IIG++ ++ Q D
Sbjct: 83 ILKVVINNKLEQRIIGVINEHKKQNND 109
Score = 38 (18.4 bits), Expect = 9.3e-08, Sum P(3) = 9.3e-08
Identities = 10/39 (25%), Positives = 21/39 (53%)
Query: 755 FYEKQENKKQFCHKYFFNYKVLKRAAELKNQMILLLKKS 793
FY+K ++ Q+ Y +K+ +L ++++ L KS
Sbjct: 825 FYQKYSSRTQYAVLYMNPHKI---NLDLILELLVYLDKS 860
>UNIPROTKB|Q7Z478 [details] [associations]
symbol:DHX29 "ATP-dependent RNA helicase DHX29"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003743 "translation initiation factor
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005739
GO:GO:0005524 GO:GO:0003743 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AY036974 EMBL:BC056219 EMBL:AL834496
EMBL:BX648101 EMBL:BX648269 EMBL:AL079292 EMBL:AF070639
IPI:IPI00217413 RefSeq:NP_061903.2 UniGene:Hs.740463
ProteinModelPortal:Q7Z478 SMR:Q7Z478 IntAct:Q7Z478
MINT:MINT-1376685 STRING:Q7Z478 PhosphoSite:Q7Z478 DMDM:110278938
PaxDb:Q7Z478 PeptideAtlas:Q7Z478 PRIDE:Q7Z478
Ensembl:ENST00000251636 GeneID:54505 KEGG:hsa:54505 UCSC:uc003jpx.3
CTD:54505 GeneCards:GC05M054552 H-InvDB:HIX0004866 HGNC:HGNC:15815
HPA:HPA038317 HPA:HPA038318 MIM:612720 neXtProt:NX_Q7Z478
PharmGKB:PA27215 HOGENOM:HOG000247063 HOVERGEN:HBG081436
InParanoid:Q7Z478 OMA:WLLYQEK OrthoDB:EOG43FGW2 PhylomeDB:Q7Z478
ChiTaRS:DHX29 GenomeRNAi:54505 NextBio:56869 Bgee:Q7Z478
CleanEx:HS_DHX29 Genevestigator:Q7Z478 GermOnline:ENSG00000067248
Uniprot:Q7Z478
Length = 1369
Score = 183 (69.5 bits), Expect = 5.5e-11, Sum P(3) = 5.5e-11
Identities = 42/99 (42%), Positives = 62/99 (62%)
Query: 604 TEPRRISVTSLANRVSEELRTTLG-----HTVGYTIRFDDCTTEDVTKIKYMTEGILMRE 658
T+PRRIS SLANRV +EL G GY IR + E T++ Y T G+L+R+
Sbjct: 628 TQPRRISAVSLANRVCDELGCENGPGGRNSLCGYQIRMESRACES-TRLLYCTTGVLLRK 686
Query: 659 MMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKILKDK 697
+ D LL S +++DEVHER++ +D L+ +LK+IL+ +
Sbjct: 687 LQEDGLLSNVSHVIVDEVHERSVQSDFLLIILKEILQKR 725
Score = 173 (66.0 bits), Expect = 1.5e-16, Sum P(4) = 1.5e-16
Identities = 47/159 (29%), Positives = 77/159 (48%)
Query: 419 GDILAFVIGLEQIEHIIGIL---KQYHNQREDLKLLILPMHGSLPNNEQIKVFRPTPRAM 475
G +L F+ GL I+ + +L ++++++R ++ +H L +Q F P +
Sbjct: 868 GAVLIFLPGLAHIQQLYDLLSNDRRFYSERYK----VIALHSILSTQDQAAAFTLPPPGV 923
Query: 476 RKIVIATNIAETSITIPGIVYVIDPGFVKARWFNPNTLTNSLVVVPISKXXXXXXXXXXX 535
RKIV+ATNIAET ITIP +V+VID G K ++ ++ +SLV +SK
Sbjct: 924 RKIVLATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQGRAG 983
Query: 536 XXXXXHVYRKNFMYNRLFIHFCVSRNIPTIPNDPKDVKC 574
+R MY R + ++P I P + C
Sbjct: 984 RVRDGFCFR---MYTRERFEGFMDYSVPEILRVPLEELC 1019
Score = 92 (37.4 bits), Expect = 0.00061, Sum P(3) = 0.00061
Identities = 25/96 (26%), Positives = 46/96 (47%)
Query: 46 RLYTEASFSQLNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPS--PPPAQNLRVALE 103
R+YT F + + PE+ R L L + + + F + PP Q + A+
Sbjct: 992 RMYTRERFEGFMDYSVPEILRVPLEELCLHIMKCNLGSPEDFLSKALDPPQLQVISNAMN 1051
Query: 104 LLYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLL 139
LL +GA ++N P+G+ +A +P++ K+L+
Sbjct: 1052 LLRKIGACELNEPKLTPLGQHLAALPVNVKIGKMLI 1087
Score = 86 (35.3 bits), Expect = 1.5e-16, Sum P(4) = 1.5e-16
Identities = 19/50 (38%), Positives = 30/50 (60%)
Query: 347 KRTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYYSND 396
KR+ L LI+ SATVD+E+ ++ ++ IL + G YPV V++ D
Sbjct: 724 KRSDLHLILMSATVDSEKFSTYF-----THCPILRISGRSYPVEVFHLED 768
Score = 68 (29.0 bits), Expect = 1.5e-16, Sum P(4) = 1.5e-16
Identities = 24/106 (22%), Positives = 50/106 (47%)
Query: 701 FECSDEIASILSLLQVQDIFIKPSSGALSLKARVLRRNFEVEQGDLLTLLNIFKFYEK-- 758
F C D +A++ +++ + F P G +A + + + D LT+ N + ++K
Sbjct: 1092 FGCLDPVATLAAVMTEKSPFTTPI-GRKD-EADLAKSALAMADSDHLTIYNAYLGWKKAR 1149
Query: 759 QE----NKKQFCHKYFFNYKVLKRAAELKNQMILLLKKSSIPLVTS 800
QE ++ +C + F N L ++K ++I L+K + T+
Sbjct: 1150 QEGGYRSEITYCRRNFLNRTSLLTLEDVKQELIKLVKAAGFSSSTT 1195
Score = 66 (28.3 bits), Expect = 1.5e-16, Sum P(4) = 1.5e-16
Identities = 12/37 (32%), Positives = 23/37 (62%)
Query: 2 TEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILM 38
T G+L+ D + S +++D+VHER++ +D L+
Sbjct: 679 TTGVLLRKLQEDGLLSNVSHVIVDEVHERSVQSDFLL 715
Score = 42 (19.8 bits), Expect = 5.5e-11, Sum P(3) = 5.5e-11
Identities = 9/27 (33%), Positives = 15/27 (55%)
Query: 421 ILAFVIGLEQIEHIIGILKQYHNQRED 447
IL VI + + IIG++ ++ Q D
Sbjct: 85 ILKVVINNKLEQRIIGVINEHKKQNND 111
>WB|WBGene00021365 [details] [associations]
symbol:smgl-2 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0010171 "body morphogenesis"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] [GO:0032940 "secretion by cell" evidence=IMP]
InterPro:IPR001650 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0009792 GO:GO:0006898 GO:GO:0040007 GO:GO:0002119
GO:GO:0032940 GO:GO:0010171 GO:GO:0040011 GO:GO:0003676
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GeneTree:ENSGT00700000104421 EMBL:FO081788 RefSeq:NP_500405.3
ProteinModelPortal:Q9N437 SMR:Q9N437 PaxDb:Q9N437
EnsemblMetazoa:Y37E11AM.1 GeneID:177135 KEGG:cel:CELE_Y37E11AM.1
UCSC:Y37E11AM.1 CTD:177135 WormBase:Y37E11AM.1 InParanoid:Q9N437
OMA:LRADVMC NextBio:895494 Uniprot:Q9N437
Length = 1018
Score = 196 (74.1 bits), Expect = 1.7e-16, Sum P(3) = 1.7e-16
Identities = 63/193 (32%), Positives = 94/193 (48%)
Query: 347 KRTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYYSNDPVVNYVQGV- 405
KR LKLI+ SAT++ + ++ A ++ V G L+P+ V + P+ ++
Sbjct: 212 KRDDLKLILMSATINLDLFKGYFE-----GAPVVQVPGRLFPIDVRWH--PIKQFIDQSD 264
Query: 406 -----VDTA--IKIHE-------SMPVGDILAFVIGLEQIEHIIGILKQYHNQREDLKLL 451
+D +KI E S GD L F+ G+ +I + LK Y +
Sbjct: 265 KKTHKIDPEPYLKILELIDKQFPSTQRGDALIFLNGVAEISMVAEHLKNYAELTNGW--I 322
Query: 452 ILPMHGSLPNNEQIKVFRPTPRAMRKIVIATNIAETSITIPGIVYVIDPGFVKARWFNPN 511
IL +H +L EQ KVF P +RK +++TN+AETS+TI GI +VID G V P
Sbjct: 323 ILMLHSTLSVEEQDKVFDQAPVGIRKCILSTNVAETSVTIDGIRFVIDSGKVNLIKHEPG 382
Query: 512 TLTNSLVVVPISK 524
T T L +SK
Sbjct: 383 TGTQKLTEFWVSK 395
Score = 153 (58.9 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 28/61 (45%), Positives = 45/61 (73%)
Query: 638 DCTTEDVTKIKYMTEGILMREMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKILKDK 697
+ T TK+ ++TEG+L+R+M D LL KY+VI+LDEVHER + +D+L+GLL+ + +
Sbjct: 154 ETTKSQKTKLLFLTEGLLLRQMEKDSLLEKYNVIILDEVHERHLTSDLLIGLLRDLCTKR 213
Query: 698 E 698
+
Sbjct: 214 D 214
Score = 100 (40.3 bits), Expect = 1.7e-16, Sum P(3) = 1.7e-16
Identities = 18/38 (47%), Positives = 30/38 (78%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILM 38
+TEG+L+ + D +EKY+VI+LD+VHER + +D+L+
Sbjct: 166 LTEGLLLRQMEKDSLLEKYNVIILDEVHERHLTSDLLI 203
Score = 89 (36.4 bits), Expect = 7.3e-05, Sum P(3) = 7.3e-05
Identities = 40/147 (27%), Positives = 70/147 (47%)
Query: 46 RLYTEASFSQLNECTPPEMQRTELSSAVLQLKALGIHNILR-FSFPSPPPAQNLRVALEL 104
RLY++ F ++++ T E+ R L L++ +L + R F F P L LE+
Sbjct: 415 RLYSQEQFEKMDDFTVSEINRVSLQEMALKMISLNLGLDPRTFPFIEKPSEDVLNEGLEV 474
Query: 105 LYSLGAM--DVNGNLT-KPVGETMAEMPLH-PIHAKVLLSSGSVLDSAVEILLHRLRGLC 160
L + D LT +G ++++P+ PI AK+L+ G V+D +E++L GL
Sbjct: 475 LKFQRVLRSDRGDILTLTALGNMVSKLPVEVPI-AKMLVY-GCVVDE-LEVMLTVAAGLS 531
Query: 161 DNVDSGPETFHDHEMCFSIRGNQTQPL 187
++ + E+ R + T PL
Sbjct: 532 VQSPFTNRSYRELEIV-ERRASLTSPL 557
Score = 46 (21.3 bits), Expect = 1.7e-16, Sum P(3) = 1.7e-16
Identities = 18/59 (30%), Positives = 29/59 (49%)
Query: 705 DEIASILSL---LQVQDIFIKPSSGALSLKARVLRRNFEVEQGDLLTLLNIFKFYEKQE 760
DE+ +L++ L VQ F S L + R R + GD TL++IF+ + Q+
Sbjct: 518 DELEVMLTVAAGLSVQSPFTNRSYRELEIVER--RASLTSPLGDPFTLISIFREWVLQK 574
Score = 42 (19.8 bits), Expect = 7.3e-05, Sum P(3) = 7.3e-05
Identities = 30/113 (26%), Positives = 51/113 (45%)
Query: 244 DKARPTIVRSSIDVACSCTV--VEFLTEMGCRMDFEYISRGYMFRKGRMKILVSKIFKMS 301
D +IV I+VA V + LT +G + G + ++ + LV + F+
Sbjct: 881 DLLNQSIVEKGIEVAVRRNVHPPKVLTGIGI-----HSPDGGIDKEEDVDDLVQR-FERD 934
Query: 302 QGKPSDSGVEPIS-QSYLVEL--SILAPGGQDVIGEDMKAFAEQLKPLKRTQL 351
Q + E + Q L EL ++ P +D+I E AE+LK LK+ ++
Sbjct: 935 QEPVHSAREEELEDQKVLDELRADVMCPPTRDMIEE-----AEKLKELKKKEI 982
Score = 38 (18.4 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 9/20 (45%), Positives = 13/20 (65%)
Query: 776 LKRAAELKNQMILLLKKSSI 795
LK AEL N I+L+ S++
Sbjct: 311 LKNYAELTNGWIILMLHSTL 330
>FB|FBgn0030246 [details] [associations]
symbol:CG1582 species:7227 "Drosophila melanogaster"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0004386 "helicase activity" evidence=ISS] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000571 InterPro:IPR001650 InterPro:IPR006575
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00642 Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:AE014298 GO:GO:0008270 GO:GO:0006200 GO:GO:0003676
GO:GO:0004386 Gene3D:3.10.110.10 InterPro:IPR016135 SUPFAM:SSF54495
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 KO:K13026 EMBL:AY119481
RefSeq:NP_572663.1 UniGene:Dm.11248 SMR:Q9VZ55
EnsemblMetazoa:FBtr0073403 GeneID:32021 KEGG:dme:Dmel_CG1582
UCSC:CG1582-RA FlyBase:FBgn0030246 InParanoid:Q9VZ55 OMA:IFQCLDS
OrthoDB:EOG4RJDGG ChiTaRS:CG1582 GenomeRNAi:32021 NextBio:776414
Uniprot:Q9VZ55
Length = 1288
Score = 199 (75.1 bits), Expect = 1.7e-10, Sum P(2) = 1.7e-10
Identities = 54/165 (32%), Positives = 93/165 (56%)
Query: 604 TEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTKIKYMTEGILMREMMTDP 663
T+PRR+S +A RV+ E +G VGY IR ++ ++ T++ + T GIL+R + +DP
Sbjct: 515 TQPRRLSAIGVAERVAAERLDRIGQLVGYQIRLENKVSQS-TRLSFCTTGILLRRLASDP 573
Query: 664 LLRKYSVIMLDEVHERTIFTDILMGLLKKILKDKERDFECSDEIASILSLLQVQDIFIKP 723
LL + +++DEVHER+ +D L+ +LK +L+++ +D + A++ + L D F
Sbjct: 574 LLGSVTHVIVDEVHERSEESDFLLLILKNLLRER-KDLKVILMSATLNAAL-FSDYF--- 628
Query: 724 SSGALSLKARVLRRNFEVEQGDLLTLLNIFKFYEKQENKKQFCHK 768
GA L + R F V+Q L +L + F + + K +C K
Sbjct: 629 -GGAPVLD--IPGRTFPVQQLFLEDILEMSDFVMEYDTK--YCRK 668
Score = 177 (67.4 bits), Expect = 1.8e-16, Sum P(5) = 1.8e-16
Identities = 45/140 (32%), Positives = 75/140 (53%)
Query: 390 SVYYSNDPVVN--YVQGVVDTAIKIHESMP-VGDILAFVIGLEQIEHIIGIL--KQYHNQ 444
S+Y +N ++ V+ ++ P G IL F+ G +I+ + L +
Sbjct: 721 SIYLMEPMTINPELIESVLKYIVEGSHDWPREGTILIFLPGFGEIQSVHDSLLDNALFSP 780
Query: 445 REDLKLLILPMHGSLPNNEQIKVFRPTPRAMRKIVIATNIAETSITIPGIVYVIDPGFVK 504
R K +++P+H +L +Q VF+ P RKIV++TNIAETS+TI V+V+D G +K
Sbjct: 781 RAG-KFILVPLHSALSGEDQALVFKKAPPGKRKIVLSTNIAETSVTIDDCVFVVDCGLMK 839
Query: 505 ARWFNPNTLTNSLVVVPISK 524
+ F+ N SL +V +S+
Sbjct: 840 EKCFDSNRNMESLDLVWVSR 859
Score = 94 (38.1 bits), Expect = 1.8e-16, Sum P(5) = 1.8e-16
Identities = 30/119 (25%), Positives = 57/119 (47%)
Query: 701 FECSDEIASILSLLQVQDIFIKPSSGALSLKARVLRRNFEVEQGDLLTLLNIFKFY---E 757
F+C D + +I + L + F+ P + +A +R F + D LT+LN ++ +
Sbjct: 982 FQCLDSVLTIAACLSNKSPFVSPLNKRT--EADKCKRMFALGNSDHLTVLNAYRKWLDVA 1039
Query: 758 KQEN---KKQFCHKYFFNYKVLKRAAELKNQMI-LLLKKSSIPLVTSPRNTNAVLKCLT 812
++ N + + ++F + L+ A+LK Q + LL+ +P+ R NA LT
Sbjct: 1040 RRGNYAASRNYASEHFLSLNTLETIADLKYQYLELLVSIGFVPIDVPRRRKNACDNILT 1098
Score = 87 (35.7 bits), Expect = 1.7e-05, Sum P(4) = 1.7e-05
Identities = 34/113 (30%), Positives = 50/113 (44%)
Query: 47 LYTEASFSQLNECTP-PEMQRTELSSAVLQLKAL---GIHNILRFSFPS--PPPAQNLRV 100
LYT + P PE+QR L VL++K L N L + P ++
Sbjct: 880 LYTSYRYQYHILAQPVPEIQRVPLEQIVLRIKTLQTFASRNTLSVLLETLEAPTEDSVLG 939
Query: 101 ALELLYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLLSSG--SVLDSAVEI 151
AL L +GA+D LT P+G +A +P+ K++L LDS + I
Sbjct: 940 ALTRLRDVGALDAEDQLT-PLGHHLAALPVDVRIGKLMLYGAIFQCLDSVLTI 991
Score = 62 (26.9 bits), Expect = 1.8e-16, Sum P(5) = 1.8e-16
Identities = 13/37 (35%), Positives = 23/37 (62%)
Query: 2 TEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILM 38
T GIL+ DP + + +++D+VHER+ +D L+
Sbjct: 561 TTGILLRRLASDPLLGSVTHVIVDEVHERSEESDFLL 597
Score = 58 (25.5 bits), Expect = 1.8e-16, Sum P(5) = 1.8e-16
Identities = 14/50 (28%), Positives = 25/50 (50%)
Query: 347 KRTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYYSND 396
+R LK+I+ SAT++A ++ A +L + G +PV + D
Sbjct: 606 ERKDLKVILMSATLNAALFSDYFG-----GAPVLDIPGRTFPVQQLFLED 650
Score = 41 (19.5 bits), Expect = 1.8e-16, Sum P(5) = 1.8e-16
Identities = 10/22 (45%), Positives = 15/22 (68%)
Query: 823 HYSGVYRTVRGNEDLYIHPSSV 844
H+ ++T RG+ + IHPSSV
Sbjct: 1150 HHDLRFKT-RGDGYVKIHPSSV 1170
Score = 38 (18.4 bits), Expect = 6.5e-11, Sum P(4) = 6.5e-11
Identities = 6/9 (66%), Positives = 8/9 (88%)
Query: 586 FQYLLEAGW 594
F +LLE+GW
Sbjct: 1223 FLFLLESGW 1231
>UNIPROTKB|F1SLN0 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 EMBL:CU929534
Ensembl:ENSSSCT00000018413 Uniprot:F1SLN0
Length = 1367
Score = 179 (68.1 bits), Expect = 1.8e-10, Sum P(3) = 1.8e-10
Identities = 41/99 (41%), Positives = 62/99 (62%)
Query: 604 TEPRRISVTSLANRVSEELRTTLG-----HTVGYTIRFDDCTTEDVTKIKYMTEGILMRE 658
T+PRRIS SLA RV +EL G GY IR + +E T++ Y T G+L+R+
Sbjct: 625 TQPRRISAVSLATRVCDELGCENGPGGKNSLCGYQIRMESRASES-TRLLYCTTGVLLRK 683
Query: 659 MMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKILKDK 697
+ D LL S +++DEVHER++ +D L+ +LK+IL+ +
Sbjct: 684 LQEDGLLTNVSHVIVDEVHERSVQSDFLLIILKEILQKR 722
Score = 173 (66.0 bits), Expect = 1.8e-16, Sum P(4) = 1.8e-16
Identities = 46/156 (29%), Positives = 73/156 (46%)
Query: 419 GDILAFVIGLEQIEHIIGILKQYHNQREDLKLLILPMHGSLPNNEQIKVFRPTPRAMRKI 478
G +L F+ GL I+ + +L + + ++ +H L +Q F P+ +RKI
Sbjct: 868 GAVLIFLPGLAHIQQLYDLLSTDRRFFSE-RYKVIALHSILSTQDQAAAFTLPPQGVRKI 926
Query: 479 VIATNIAETSITIPGIVYVIDPGFVKARWFNPNTLTNSLVVVPISKXXXXXXXXXXXXXX 538
V+ATNIAET ITIP +V+VID G K ++ ++ +SLV +SK
Sbjct: 927 VLATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQGRAGRVR 986
Query: 539 XXHVYRKNFMYNRLFIHFCVSRNIPTIPNDPKDVKC 574
+R MY R + ++P I P + C
Sbjct: 987 DGFCFR---MYTRERFEGFMDYSVPEILRVPLEELC 1019
Score = 92 (37.4 bits), Expect = 0.00077, Sum P(3) = 0.00076
Identities = 25/96 (26%), Positives = 46/96 (47%)
Query: 46 RLYTEASFSQLNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPS--PPPAQNLRVALE 103
R+YT F + + PE+ R L L + + + F + PP Q + A+
Sbjct: 992 RMYTRERFEGFMDYSVPEILRVPLEELCLHIMKCNLGSPEDFLSKALDPPQLQVISNAMH 1051
Query: 104 LLYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLL 139
LL +GA ++N P+G+ +A +P++ K+L+
Sbjct: 1052 LLRKIGACELNEPKLTPLGQHLAALPVNVKIGKMLI 1087
Score = 86 (35.3 bits), Expect = 1.8e-16, Sum P(4) = 1.8e-16
Identities = 19/50 (38%), Positives = 30/50 (60%)
Query: 347 KRTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYYSND 396
KR+ L LI+ SATVD+E+ ++ ++ IL + G YPV V++ D
Sbjct: 721 KRSDLHLILMSATVDSEKFSTYF-----THCPILRISGRSYPVEVFHLED 765
Score = 68 (29.0 bits), Expect = 1.8e-16, Sum P(4) = 1.8e-16
Identities = 35/142 (24%), Positives = 62/142 (43%)
Query: 701 FECSDEIASILSLLQVQDIFIKPSSGALSLKARVLRRNFEVEQGDLLTLLNIFKFYEK-- 758
F C D +A++ +++ + F P G +A + + + D LT+ N + ++K
Sbjct: 1092 FGCLDPVATLAAVMTEKSPFTTPI-GRKD-EADLAKSALAMADSDHLTIYNAYLGWKKAQ 1149
Query: 759 QE----NKKQFCHKYFFNYKVLKRAAELKNQMILLLKKSSIPLVT---SPRNTN------ 805
QE ++ +C + F N L E+K + LLK + T S R +
Sbjct: 1150 QEGGYRSEIAYCRRNFLNRTSLLTLEEIKRRRTTLLKLIFYSIKTYYSSSRASQTLSFQE 1209
Query: 806 -AVLKC-LTNGFFSNAAYLHYS 825
A+LK LT G + N + Y+
Sbjct: 1210 IALLKAVLTAGLYDNVGKIIYT 1231
Score = 65 (27.9 bits), Expect = 1.8e-16, Sum P(4) = 1.8e-16
Identities = 12/37 (32%), Positives = 23/37 (62%)
Query: 2 TEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILM 38
T G+L+ D + S +++D+VHER++ +D L+
Sbjct: 676 TTGVLLRKLQEDGLLTNVSHVIVDEVHERSVQSDFLL 712
Score = 41 (19.5 bits), Expect = 1.8e-10, Sum P(3) = 1.8e-10
Identities = 9/27 (33%), Positives = 15/27 (55%)
Query: 421 ILAFVIGLEQIEHIIGILKQYHNQRED 447
IL VI + + IIG++ ++ Q D
Sbjct: 83 ILKVVINNKLEQKIIGVINEHKKQNND 109
Score = 40 (19.1 bits), Expect = 3.6e-07, Sum P(4) = 3.6e-07
Identities = 16/63 (25%), Positives = 29/63 (46%)
Query: 713 LLQVQDIFIKPSSGALSLKARVLRRNFEVEQGDLLTLLNIFKFYEKQENKKQFCHKYFFN 772
L + ++I I +S A +K + V+ G T ++ FY+K N+ Q Y
Sbjct: 785 LEEEEEITINVTSKAGGIKK--YQEYIPVQTG---TSADLNPFYQKYSNRTQHAILYMNP 839
Query: 773 YKV 775
+K+
Sbjct: 840 HKI 842
Score = 38 (18.4 bits), Expect = 1.9e-13, Sum P(4) = 1.9e-13
Identities = 17/55 (30%), Positives = 24/55 (43%)
Query: 806 AVLKC-LTNGFFSNAAYLHYSG----------VYRTVRGNEDLYIHPSSVLYTLQ 849
A+LK LT G + N + Y+ + T +G +HPSSV LQ
Sbjct: 1211 ALLKAVLTAGLYDNVGKIIYTKSVDVTEKLACIVETAQGKAQ--VHPSSVNRDLQ 1263
>UNIPROTKB|G4MZR9 [details] [associations]
symbol:MGG_07059 "Pre-mRNA-splicing factor ATP-dependent
RNA helicase prp22" species:242507 "Magnaporthe oryzae 70-15"
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR006575 InterPro:IPR007502
InterPro:IPR009060 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 Pfam:PF05773 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00591 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR015940 SMART:SM00165 Gene3D:3.10.110.10
InterPro:IPR016135 SUPFAM:SSF54495 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:CM001232 SUPFAM:SSF46934 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 RefSeq:XP_003715240.1
ProteinModelPortal:G4MZR9 EnsemblFungi:MGG_07059T0 GeneID:2682944
KEGG:mgr:MGG_07059 Uniprot:G4MZR9
Length = 1404
Score = 177 (67.4 bits), Expect = 1.9e-16, Sum P(5) = 1.9e-16
Identities = 45/110 (40%), Positives = 63/110 (57%)
Query: 399 VNYVQGVVDTAIKIHESMPV----GDILAFVIGLEQIEHIIGILKQYHNQREDLKLLILP 454
+NY +V+T I + + G IL F+ G+ +I G+L+ + L +LP
Sbjct: 865 INY-NLLVETTEAIDNELSLAQKSGGILIFLPGVAEINRACGMLRSLNC------LHVLP 917
Query: 455 MHGSLPNNEQIKVFRPTPRAMRKIVIATNIAETSITIPGIVYVIDPGFVK 504
+H SL EQ KVF P P RK+V+ATN+AETSITI I+ V+D G VK
Sbjct: 918 LHASLETKEQRKVFVPPPSGKRKVVVATNVAETSITIDDIIVVVDTGKVK 967
Score = 174 (66.3 bits), Expect = 1.3e-11, Sum P(3) = 1.3e-11
Identities = 41/108 (37%), Positives = 67/108 (62%)
Query: 603 ITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTKIKYMTEGILMREMMT- 661
+T+PRRIS LA+RVS+E + +G VGY IR + T T+I ++T G+L+R +
Sbjct: 687 VTQPRRISALGLADRVSDERCSQVGQEVGYIIR-GESRTGPKTRITFVTTGVLLRRLQVS 745
Query: 662 -----DPL--LRKYSVIMLDEVHERTIFTDILMGLLKKILKDKERDFE 702
D + L S +++DEVHER++ TD L+ +++ +LK + RD +
Sbjct: 746 GGRVEDVVASLADVSHVVIDEVHERSLDTDFLLSIIRDVLKQR-RDLK 792
Score = 84 (34.6 bits), Expect = 1.9e-16, Sum P(5) = 1.9e-16
Identities = 26/94 (27%), Positives = 42/94 (44%)
Query: 701 FECSDEIASILSLLQV-QDIFIKPSSGALSLKARVLRRNFEVEQGDLLTLLNIFKFYE-- 757
F C ++ S+ +LL + +F+ P +AR R F GDLLT L F+ ++
Sbjct: 1105 FGCLEDCVSVAALLSSGRGVFVSPPDKRD--QAREARARFAAGDGDLLTDLRAFQAWDAM 1162
Query: 758 ------KQENKKQFCHKYFFNYKVLKRAAELKNQ 785
+Q + + FC F +Y L A + Q
Sbjct: 1163 MRDPSVQQRHVRSFCDDNFLSYLTLSDVASARTQ 1196
Score = 73 (30.8 bits), Expect = 1.9e-16, Sum P(5) = 1.9e-16
Identities = 16/57 (28%), Positives = 30/57 (52%)
Query: 347 KRTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYYSNDPVVNYVQ 403
+R LKL++ SAT+D+ ++ + + + G +PV+ YY +D V+ Q
Sbjct: 787 QRRDLKLVLMSATLDSATFASYF-VQDGIRVGQVEIAGRTFPVTDYYLDD-VIRMTQ 841
Score = 58 (25.5 bits), Expect = 1.9e-16, Sum P(5) = 1.9e-16
Identities = 12/33 (36%), Positives = 21/33 (63%)
Query: 10 DDHDPSVEKYSVIMLDKVHERTIFTDILMECSR 42
+D S+ S +++D+VHER++ TD L+ R
Sbjct: 750 EDVVASLADVSHVVIDEVHERSLDTDFLLSIIR 782
Score = 42 (19.8 bits), Expect = 1.9e-16, Sum P(5) = 1.9e-16
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 812 TNGFFSNAAYLHYSGVYRT 830
+ GF NAA+L Y + T
Sbjct: 1294 SQGFSGNAAFLSYFSIIST 1312
Score = 41 (19.5 bits), Expect = 2.4e-16, Sum P(5) = 2.4e-16
Identities = 7/16 (43%), Positives = 11/16 (68%)
Query: 834 NEDLYIHPSSVLYTLQ 849
N +++HPSS L+ Q
Sbjct: 1280 NGRVFVHPSSTLFDSQ 1295
>UNIPROTKB|E2RNT3 [details] [associations]
symbol:DHX9 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070937 "CRD-mediated mRNA stability complex"
evidence=IEA] [GO:0070934 "CRD-mediated mRNA stabilization"
evidence=IEA] [GO:0034605 "cellular response to heat" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0007623
"circadian rhythm" evidence=IEA] [GO:0005813 "centrosome"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0001085
"RNA polymerase II transcription factor binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003725 "double-stranded RNA
binding" evidence=IEA] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00358 SMART:SM00490
SMART:SM00847 InterPro:IPR014720 GO:GO:0005524 GO:GO:0005813
GO:GO:0034605 GO:GO:0005730 Gene3D:3.30.160.20 GO:GO:0030529
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 CTD:1660 KO:K13184 GO:GO:0070937
OMA:DDWIRLQ GO:GO:0070934 EMBL:AAEX03005146 EMBL:AAEX03005147
RefSeq:XP_537154.2 Ensembl:ENSCAFT00000020976 GeneID:480032
KEGG:cfa:480032 NextBio:20855120 Uniprot:E2RNT3
Length = 1276
Score = 174 (66.3 bits), Expect = 2.1e-16, Sum P(4) = 2.1e-16
Identities = 43/120 (35%), Positives = 68/120 (56%)
Query: 405 VVDTAIKIHESMPV-GDILAFVIGLEQIEHIIGILKQYHNQREDL---KLLILPMHGSLP 460
+++ +K E++ V G +L F+ G ++I ++++ D + ILP+H +P
Sbjct: 637 LIEALLKYIETLNVPGAVLVFLPGW----NLIYTMQKHLEMNPDFGSHRYQILPLHSQIP 692
Query: 461 NNEQIKVFRPTPRAMRKIVIATNIAETSITIPGIVYVIDPGFVKARWFNP-NTLTNSLVV 519
EQ KVF P P + K++++TNIAETSITI +VYVID K + F N +TN V
Sbjct: 693 REEQRKVFDPVPAGVTKVILSTNIAETSITINDVVYVIDSCKQKVKLFTAHNNMTNYATV 752
Score = 163 (62.4 bits), Expect = 1.1e-10, Sum P(3) = 1.1e-10
Identities = 34/95 (35%), Positives = 58/95 (61%)
Query: 601 IGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTKIKYMTEGILMREMM 660
I +T+PRRIS S+A RV+ E G + GY++RF+ I + T G+L+R++
Sbjct: 441 IVVTQPRRISAVSVAERVAYERGEEPGKSCGYSVRFESVLPRPYASIMFCTVGVLLRKLE 500
Query: 661 TDPLLRKYSVIMLDEVHERTIFTDILMGLLKKILK 695
+R S +++DE+HER I TD L+ +L+ +++
Sbjct: 501 AG--IRGISHVIVDEIHERDINTDFLLVVLRDVVQ 533
Score = 120 (47.3 bits), Expect = 2.1e-07, Sum P(3) = 2.1e-07
Identities = 32/95 (33%), Positives = 48/95 (50%)
Query: 47 LYTEASFSQLNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPS--PPPAQNLRVALEL 104
L + A F +L PEM RT L L +K L + I +F + PPP + A
Sbjct: 777 LCSRARFERLETHMTPEMFRTPLHEIALSIKLLRLGGIGQFLAKAIEPPPLDAVIEAEHT 836
Query: 105 LYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLL 139
L L A+D N LT P+G +A++P+ P K+++
Sbjct: 837 LRELDALDANDELT-PLGRILAKLPIEPRFGKMMI 870
Score = 77 (32.2 bits), Expect = 2.1e-16, Sum P(4) = 2.1e-16
Identities = 14/47 (29%), Positives = 26/47 (55%)
Query: 350 QLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYYSND 396
++++++ SAT+D C+++ N I+ V G YPV Y+ D
Sbjct: 537 EVRIVLMSATIDTSMFCEYF-----FNCPIIEVYGRTYPVQEYFLED 578
Score = 76 (31.8 bits), Expect = 2.1e-16, Sum P(4) = 2.1e-16
Identities = 35/126 (27%), Positives = 53/126 (42%)
Query: 735 LRRNFEVEQ-GDLLTLLNIFKFYEK-----QENKKQFCHKYFFNYKVLKRAAELKNQMIL 788
+ RNF + D + LL++F+ ++ +E + +FC N L+ E K Q+
Sbjct: 904 IHRNFAGNRFSDHVALLSVFQAWDDARMGGEEAEIRFCEHKRLNMATLRMTWEAKVQLKE 963
Query: 789 LLKKSSIP---LVTS------P-RNTNAVLKCLTNGFFSNAAYLHYSGVYRTVRGNEDLY 838
+L S P L+T P N + V+ L G + N Y T G L
Sbjct: 964 ILINSGFPEDCLLTQVFTNTGPDNNLDVVISLLAFGVYPNVCYHKEKRKILTTEGRNAL- 1022
Query: 839 IHPSSV 844
IH SSV
Sbjct: 1023 IHKSSV 1028
Score = 63 (27.2 bits), Expect = 2.1e-16, Sum P(4) = 2.1e-16
Identities = 15/49 (30%), Positives = 26/49 (53%)
Query: 2 TEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILMECSRKFSRLYTE 50
T G+L+ + + S +++D++HER I TD L+ R + Y E
Sbjct: 491 TVGVLLRK--LEAGIRGISHVIVDEIHERDINTDFLLVVLRDVVQAYPE 537
Score = 51 (23.0 bits), Expect = 3.4e-15, Sum P(4) = 3.4e-15
Identities = 19/67 (28%), Positives = 32/67 (47%)
Query: 62 PEMQRTELSSAVLQLKALGIHNILRFSFPSPP-PAQNLRVAL-ELLYSLGAMDVNGNLTK 119
P+ R+ ++ + +K LG R + AQ+ ++L LY LG ++ LTK
Sbjct: 206 PDHNRSFIAEMTIYIKQLGRRIFAREHGSNKKLAAQSCALSLVRQLYHLGVIEAYSGLTK 265
Query: 120 PV-GETM 125
GET+
Sbjct: 266 KKEGETV 272
>TAIR|locus:2039280 [details] [associations]
symbol:AT2G35920 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0004386
"helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0006499
"N-terminal protein myristoylation" evidence=RCA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:CP002685 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 KO:K14442 OMA:RIRNRSY IPI:IPI00520060
RefSeq:NP_850255.1 UniGene:At.27892 ProteinModelPortal:F4ILR7
SMR:F4ILR7 PRIDE:F4ILR7 EnsemblPlants:AT2G35920.1 GeneID:818165
KEGG:ath:AT2G35920 Uniprot:F4ILR7
Length = 995
Score = 184 (69.8 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 38/98 (38%), Positives = 63/98 (64%)
Query: 597 DTKLIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTKIKYMTEGILM 656
D +I T+PRRIS S+A+R+S E ++G +VGY IR + D T++ + T G+L+
Sbjct: 277 DCNII-CTQPRRISAISVASRISAERGESIGESVGYQIRLES-KRSDQTRLLFCTTGVLL 334
Query: 657 REMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKIL 694
R ++ DP L S +++DE+HER + D L+ +L+ +L
Sbjct: 335 RRLIEDPNLTNVSHLLVDEIHERGMNEDFLLIILRDLL 372
Score = 183 (69.5 bits), Expect = 2.2e-16, Sum P(4) = 2.2e-16
Identities = 52/159 (32%), Positives = 78/159 (49%)
Query: 419 GDILAFVIGLEQIEHIIGILKQYHNQREDLKLLILPMHGSLPNNEQIKVF-RPTPRAMRK 477
G IL F+ G ++I ++ + + + K L+LP+HGS+P Q ++F RP P RK
Sbjct: 504 GAILVFLTGWDEISKLLEKINMNNFLGDSSKFLVLPLHGSMPTVNQREIFDRPPPNK-RK 562
Query: 478 IVIATNIAETSITIPGIVYVIDPGFVKARWFNPNTLTNSLVVVP--ISKXXXXXXXXXXX 535
IV+ATNIAE+SITI +VYV+D G KA+ + + L ++P ISK
Sbjct: 563 IVLATNIAESSITIDDVVYVVDCG--KAKETSYDALNKVACLLPSWISKASAHQRRGRAG 620
Query: 536 XXXXXHVYRKNFMYNRLFIHFCVSRNIPTIPNDPKDVKC 574
YR +Y ++ +P I P C
Sbjct: 621 RVQAGVCYR---LYPKVIYDAFPQYQLPEIIRTPLQELC 656
Score = 110 (43.8 bits), Expect = 8.0e-07, Sum P(3) = 8.0e-07
Identities = 31/96 (32%), Positives = 51/96 (53%)
Query: 46 RLYTEASFSQLNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPS--PPPAQNLRVALE 103
RLY + + + PE+ RT L L +K+L + +I F + PP A + A+E
Sbjct: 629 RLYPKVIYDAFPQYQLPEIIRTPLQELCLHIKSLQVGSIGSFLAKALQPPDALAVENAIE 688
Query: 104 LLYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLL 139
LL ++GA++ LT P+G + +P+ P K+LL
Sbjct: 689 LLKTIGALNDVEELT-PLGRHLCTLPVDPNIGKMLL 723
Score = 74 (31.1 bits), Expect = 2.2e-16, Sum P(4) = 2.2e-16
Identities = 37/158 (23%), Positives = 64/158 (40%)
Query: 701 FECSDEIASILSLLQVQDIFIKPSSGALSLKARVLRRNFEVEQ-GDLLTLLNIFKFYEKQ 759
F+C + +I + L + F+ P + +A +R F + D + LL ++ Y
Sbjct: 728 FQCVNPALTIAAALAYRSPFVLPLNR--KEEADEAKRYFAGDSCSDHIALLKAYEGYRDA 785
Query: 760 E---NKKQFCHKYFFNYKVLKRAAELKNQMILLLKKSSIPLVTSPRNTNA-------VLK 809
+ N+K FC + F + L+ +++NQ + LL + P N +
Sbjct: 786 KRGGNEKDFCWQNFLSPVTLRMMEDMRNQFLDLLSDIGFVDKSKPNAYNQYSYDMEMISA 845
Query: 810 CLTNGFFSNAAYLHYSGVYRTVRGNEDLY---IHPSSV 844
L G + N G RT ++L IHP SV
Sbjct: 846 VLCAGLYPNVVQCKRRGK-RTAFYTKELGKVDIHPGSV 882
Score = 66 (28.3 bits), Expect = 2.2e-16, Sum P(4) = 2.2e-16
Identities = 12/37 (32%), Positives = 23/37 (62%)
Query: 2 TEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILM 38
T G+L+ DP++ S +++D++HER + D L+
Sbjct: 329 TTGVLLRRLIEDPNLTNVSHLLVDEIHERGMNEDFLL 365
Score = 61 (26.5 bits), Expect = 2.2e-16, Sum P(4) = 2.2e-16
Identities = 17/66 (25%), Positives = 33/66 (50%)
Query: 332 IGED-MKAFAEQLKPLKRTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVS 390
+ ED + L P +R L+LI+ SAT++A+ ++ N+ + + G +PV+
Sbjct: 359 MNEDFLLIILRDLLP-RRPDLRLILMSATINADMFSTYFG-----NSPTMHIPGFTFPVA 412
Query: 391 VYYSND 396
+ D
Sbjct: 413 ELFLED 418
>UNIPROTKB|H7BXY3 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HGNC:HGNC:16716 EMBL:AC139667 EMBL:AC026318
ProteinModelPortal:H7BXY3 SMR:H7BXY3 PRIDE:H7BXY3
Ensembl:ENST00000348968 Bgee:H7BXY3 Uniprot:H7BXY3
Length = 1166
Score = 190 (71.9 bits), Expect = 2.4e-16, Sum P(3) = 2.4e-16
Identities = 63/229 (27%), Positives = 103/229 (44%)
Query: 405 VVDTAIKIHESMPVGDILAFVIGLEQIEHIIGILKQYHNQREDLKLLILPMHGSLPNNEQ 464
V D + I G IL F+ G ++I+ + L++ E K LILP+H ++P +Q
Sbjct: 627 VTDLVLHIDARGEPGGILCFLPGWQEIKGVQQRLQEALGMHES-KYLILPVHSNIPMMDQ 685
Query: 465 IKVFRPTPRAMRKIVIATNIAETSITIPGIVYVIDPGFVKARWFNPNTLTNSLVVVPISK 524
+F+ P +RKIV+ATNIAETSITI IV+V+D G K ++ T + L V +S+
Sbjct: 686 KAIFQQPPVGVRKIVLATNIAETSITINDIVHVVDSGLHKEERYDLKTKVSCLETVWVSR 745
Query: 525 XXXXXXXXXXXXXXXXHVYRKNFMYNRLFIHFCVSRNIPTIPNDP-KDVKCDVMFHKVFF 583
Y ++ R + V +P I P +++ H
Sbjct: 746 ANVIQRRGRAGRCQSGFAYH---LFPRSRLEKMVPFQVPEILRTPLENLVLQAKIHMPEK 802
Query: 584 SFFQYLLEAGWCYDTKLIGITEPRRISVTSLANRVSEELRTTLGHTVGY 632
+ ++L +A D+ I + I + + E TTLG + +
Sbjct: 803 TAVEFLSKA---VDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLAH 848
Score = 177 (67.4 bits), Expect = 3.6e-08, Sum P(2) = 3.6e-08
Identities = 38/89 (42%), Positives = 56/89 (62%)
Query: 603 ITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTKIKYMTEGILMREMMTD 662
IT+PRRIS S+A RVS EL +L VG+ +R + + + T GIL+R++ ++
Sbjct: 460 ITQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPSRGGALLFCTVGILLRKLQSN 519
Query: 663 PLLRKYSVIMLDEVHERTIFTDILMGLLK 691
P L S +++DEVHER + TD L+ LLK
Sbjct: 520 PSLEGVSHVIVDEVHERDVNTDFLLILLK 548
Score = 83 (34.3 bits), Expect = 2.4e-16, Sum P(3) = 2.4e-16
Identities = 18/46 (39%), Positives = 28/46 (60%)
Query: 2 TEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILMECSRKFSRL 47
T GIL+ +PS+E S +++D+VHER + TD L+ + RL
Sbjct: 508 TVGILLRKLQSNPSLEGVSHVIVDEVHERDVNTDFLLILLKGLQRL 553
Score = 70 (29.7 bits), Expect = 2.4e-16, Sum P(3) = 2.4e-16
Identities = 18/56 (32%), Positives = 29/56 (51%)
Query: 343 LKPLKRTQ--LKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYYSND 396
LK L+R L+L++ SAT D E +++ ++ V G +YPV +Y D
Sbjct: 547 LKGLQRLNPALRLVLMSATGDNERFSRYFG-----GCPVIKVPGFMYPVKEHYLED 597
Score = 40 (19.1 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 10/40 (25%), Positives = 20/40 (50%)
Query: 345 PLKRTQLKLIISSATVD--AEEICQFYNISASSNATILSV 382
PL + L +I AT A+ + QF+ + + + L++
Sbjct: 215 PLPKNLLAKVIQIATSSSTAKNLMQFHTVGTKTKLSTLTL 254
>UNIPROTKB|Q6P158 [details] [associations]
symbol:DHX57 "Putative ATP-dependent RNA helicase DHX57"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000571
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR006575
InterPro:IPR007502 InterPro:IPR009060 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00642 Pfam:PF04408 Pfam:PF05773
PROSITE:PS00690 PROSITE:PS50103 PROSITE:PS51194 SMART:SM00356
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0046872
GO:GO:0008270 GO:GO:0003676 InterPro:IPR015940 PROSITE:PS50030
EMBL:AC018693 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
SUPFAM:SSF46934 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AK057423 EMBL:BC053623 EMBL:BC060778
EMBL:BC065278 EMBL:BC131534 EMBL:AF283512 IPI:IPI00168885
IPI:IPI00399364 IPI:IPI00749029 RefSeq:NP_945314.1
UniGene:Hs.468226 ProteinModelPortal:Q6P158 SMR:Q6P158
IntAct:Q6P158 STRING:Q6P158 PhosphoSite:Q6P158 DMDM:94710252
PaxDb:Q6P158 PeptideAtlas:Q6P158 PRIDE:Q6P158
Ensembl:ENST00000295373 GeneID:90957 KEGG:hsa:90957 UCSC:uc002rre.3
UCSC:uc002rrg.3 CTD:90957 GeneCards:GC02M039025 HGNC:HGNC:20086
HPA:HPA036160 neXtProt:NX_Q6P158 PharmGKB:PA134919698
HOVERGEN:HBG080658 InParanoid:Q6P158 KO:K13026 OMA:RAYKGWQ
OrthoDB:EOG4ZS929 PhylomeDB:Q6P158 ChiTaRS:DHX57 GenomeRNAi:90957
NextBio:77048 ArrayExpress:Q6P158 Bgee:Q6P158 CleanEx:HS_DHX57
Genevestigator:Q6P158 GermOnline:ENSG00000163214 Uniprot:Q6P158
Length = 1386
Score = 184 (69.8 bits), Expect = 2.4e-16, Sum P(5) = 2.4e-16
Identities = 53/179 (29%), Positives = 90/179 (50%)
Query: 402 VQGVVDTAIKIHESMPVGDILAFVIGLEQIEHIIGILKQ---YHNQREDLKLLILPMHGS 458
++ +++ + S P G IL F+ GL +I+ + L+ ++N+R + + +I P+H S
Sbjct: 831 IEALLEWIVDGKHSYPPGAILVFLPGLAEIKMLYEQLQSNSLFNNRRSN-RCVIHPLHSS 889
Query: 459 LPNNEQIKVFRPTPRAMRKIVIATNIAETSITIPGIVYVIDPGFVKARWFNPNTLTNSLV 518
L + EQ VF P + KI+I+TNIAETSITI +VYVID G +K + ++ + SL
Sbjct: 890 LSSEEQQAVFVKPPAGVTKIIISTNIAETSITIDDVVYVIDSGKMKEKRYDASKGMESLE 949
Query: 519 VVPISKXXXXXXXXXXXXXXXX---HVYRKNFMYNRLFIHFCVSRNIPTIPNDPKDVKC 574
+S+ H++ + YN H + + +P I P + C
Sbjct: 950 DTFVSQANALQRKGRAGRVASGVCFHLFTSHH-YN----HQLLKQQLPEIQRVPLEQLC 1003
Score = 182 (69.1 bits), Expect = 8.7e-12, Sum P(4) = 8.7e-12
Identities = 40/94 (42%), Positives = 60/94 (63%)
Query: 604 TEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTKIKYMTEGILMREMMTDP 663
T+PRRIS S+A RV++E +G TVGY IR + + T++ Y T G+L+R + D
Sbjct: 599 TQPRRISAISVAERVAKERAERVGLTVGYQIRLESVKSS-ATRLLYCTTGVLLRRLEGDT 657
Query: 664 LLRKYSVIMLDEVHERTIFTDILMGLLKKILKDK 697
L+ S I++DEVHERT +D L+ +LK I+ +
Sbjct: 658 ALQGVSHIIVDEVHERTEESDFLLLVLKDIVSQR 691
Score = 96 (38.9 bits), Expect = 0.00010, Sum P(4) = 0.00010
Identities = 38/114 (33%), Positives = 59/114 (51%)
Query: 47 LYTEASFS-QLNECTPPEMQRTELSSAVLQLKALGI---HNILR-FS-FPSPPPAQNLRV 100
L+T ++ QL + PE+QR L L++K L + HN+ FS PP +LR
Sbjct: 976 LFTSHHYNHQLLKQQLPEIQRVPLEQLCLRIKILEMFSAHNLQSVFSRLIEPPHTDSLRA 1035
Query: 101 ALELLYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLLSSGSV---LDSAVEI 151
+ L LGA+ + LT P+G +A +P+ K++L GS+ LD A+ I
Sbjct: 1036 SKIRLRDLGALTPDERLT-PLGYHLASLPVDVRIGKLMLF-GSIFRCLDPALTI 1087
Score = 73 (30.8 bits), Expect = 2.4e-16, Sum P(5) = 2.4e-16
Identities = 25/95 (26%), Positives = 40/95 (42%)
Query: 701 FECSDEIASILSLLQVQDIFIKPSSGALSLKARVLRRNFEVEQGDLLTLLNIFKFYE--K 758
F C D +I + L + F+ P + L F D L LL +K ++
Sbjct: 1078 FRCLDPALTIAASLAFKSPFVSPWDKKEEANQKKLE--FAFANSDYLALLQAYKGWQLST 1135
Query: 759 QENKK---QFCHKYFFNYKVLKRAAELKNQMILLL 790
+E + +C + F + +VL+ A LK Q LL
Sbjct: 1136 KEGVRASYNYCRQNFLSGRVLQEMASLKRQFTELL 1170
Score = 69 (29.3 bits), Expect = 2.4e-16, Sum P(5) = 2.4e-16
Identities = 14/37 (37%), Positives = 25/37 (67%)
Query: 2 TEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILM 38
T G+L+ + D +++ S I++D+VHERT +D L+
Sbjct: 645 TTGVLLRRLEGDTALQGVSHIIVDEVHERTEESDFLL 681
Score = 67 (28.6 bits), Expect = 2.4e-16, Sum P(5) = 2.4e-16
Identities = 16/58 (27%), Positives = 32/58 (55%)
Query: 347 KRTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYYSNDP--VVNYV 402
+R L++I+ SAT++AE ++N + ++++ G +PV ++ D V YV
Sbjct: 690 QRPGLQVILMSATLNAELFSDYFN-----SCPVITIPGRTFPVDQFFLEDAIAVTRYV 742
Score = 51 (23.0 bits), Expect = 8.7e-12, Sum P(4) = 8.7e-12
Identities = 33/123 (26%), Positives = 56/123 (45%)
Query: 383 KGHLYP-----VSVYYSND--PV---VNYVQGVVDTAIKIHE-SMPVGDILAFVIGLEQI 431
K H YP V+ Y +N+ P+ ++ + + D A+ E S PV + + + LE+
Sbjct: 361 KDHKYPYQAPLVAFYSTNENLPLACRLHISEFLYDKALTFAETSEPV--VYSLITLLEEE 418
Query: 432 EHIIGILKQYHNQREDLKLLILPMHGSLPNNEQIKVFRPTPRAMRKIVIATNIAETSITI 491
I+ +L H++ D + LP+ P+ +I P A K VI N + S I
Sbjct: 419 SEIVKLLTNTHHKYSDPPVNFLPV----PSRTRIN--NP---ACHKTVIPNN-SFVSNQI 468
Query: 492 PGI 494
P +
Sbjct: 469 PEV 471
Score = 43 (20.2 bits), Expect = 8.0e-09, Sum P(4) = 8.0e-09
Identities = 12/53 (22%), Positives = 28/53 (52%)
Query: 709 SILSLLQVQDIFIKPSSGA--LSLKARVLRRNFEVEQGDLLTLLNIFKFYEKQ 759
S LS + Q +F+KP +G + + + + ++ D++ +++ K EK+
Sbjct: 888 SSLSSEEQQAVFVKPPAGVTKIIISTNIAETSITID--DVVYVIDSGKMKEKR 938
Score = 39 (18.8 bits), Expect = 2.4e-16, Sum P(5) = 2.4e-16
Identities = 7/13 (53%), Positives = 11/13 (84%)
Query: 837 LYIHPSSVLYTLQ 849
++IHPSSV Y ++
Sbjct: 1262 VHIHPSSVNYQVR 1274
Score = 38 (18.4 bits), Expect = 4.3e-13, Sum P(4) = 4.3e-13
Identities = 12/40 (30%), Positives = 21/40 (52%)
Query: 772 NYKVLKRAAELKNQMILLL----KKSSIPLVTSPRNTNAV 807
+++V + EL+ ++ LL K SI L T PR + +
Sbjct: 1337 SHQVAELVKELRCELDQLLQDKIKNPSIDLCTCPRGSRII 1376
>UNIPROTKB|Q7L2E3 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0003682 "chromatin binding"
evidence=IDA] [GO:0042645 "mitochondrial nucleoid" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005739 "mitochondrion"
evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003682
GO:GO:0003723 GO:GO:0042645 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 CTD:22907 HOGENOM:HOG000112212 HOVERGEN:HBG081437
KO:K13185 OrthoDB:EOG4VHK5M EMBL:AB020697 EMBL:AK002076
EMBL:AK291266 EMBL:BC014237 EMBL:BC015029 EMBL:BC020126
EMBL:BC038417 IPI:IPI00411733 IPI:IPI00926109 IPI:IPI00927809
PIR:E56236 RefSeq:NP_055781.2 RefSeq:NP_619520.1 UniGene:Hs.517948
PDB:2DB2 PDBsum:2DB2 ProteinModelPortal:Q7L2E3 SMR:Q7L2E3
IntAct:Q7L2E3 MINT:MINT-1186537 STRING:Q7L2E3 PhosphoSite:Q7L2E3
DMDM:74758997 PaxDb:Q7L2E3 PRIDE:Q7L2E3 DNASU:22907
Ensembl:ENST00000445061 Ensembl:ENST00000446256
Ensembl:ENST00000457607 GeneID:22907 KEGG:hsa:22907 UCSC:uc003crt.3
UCSC:uc003cru.3 GeneCards:GC03P047844 HGNC:HGNC:16716 HPA:HPA034806
neXtProt:NX_Q7L2E3 PharmGKB:PA27217 InParanoid:Q7L2E3 OMA:LHKEERY
PhylomeDB:Q7L2E3 EvolutionaryTrace:Q7L2E3 GenomeRNAi:22907
NextBio:43571 ArrayExpress:Q7L2E3 Bgee:Q7L2E3 CleanEx:HS_DHX30
Genevestigator:Q7L2E3 Uniprot:Q7L2E3
Length = 1194
Score = 190 (71.9 bits), Expect = 2.6e-16, Sum P(3) = 2.6e-16
Identities = 63/229 (27%), Positives = 103/229 (44%)
Query: 405 VVDTAIKIHESMPVGDILAFVIGLEQIEHIIGILKQYHNQREDLKLLILPMHGSLPNNEQ 464
V D + I G IL F+ G ++I+ + L++ E K LILP+H ++P +Q
Sbjct: 655 VTDLVLHIDARGEPGGILCFLPGWQEIKGVQQRLQEALGMHES-KYLILPVHSNIPMMDQ 713
Query: 465 IKVFRPTPRAMRKIVIATNIAETSITIPGIVYVIDPGFVKARWFNPNTLTNSLVVVPISK 524
+F+ P +RKIV+ATNIAETSITI IV+V+D G K ++ T + L V +S+
Sbjct: 714 KAIFQQPPVGVRKIVLATNIAETSITINDIVHVVDSGLHKEERYDLKTKVSCLETVWVSR 773
Query: 525 XXXXXXXXXXXXXXXXHVYRKNFMYNRLFIHFCVSRNIPTIPNDP-KDVKCDVMFHKVFF 583
Y ++ R + V +P I P +++ H
Sbjct: 774 ANVIQRRGRAGRCQSGFAYH---LFPRSRLEKMVPFQVPEILRTPLENLVLQAKIHMPEK 830
Query: 584 SFFQYLLEAGWCYDTKLIGITEPRRISVTSLANRVSEELRTTLGHTVGY 632
+ ++L +A D+ I + I + + E TTLG + +
Sbjct: 831 TAVEFLSKA---VDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLAH 876
Score = 177 (67.4 bits), Expect = 3.8e-08, Sum P(2) = 3.8e-08
Identities = 38/89 (42%), Positives = 56/89 (62%)
Query: 603 ITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTKIKYMTEGILMREMMTD 662
IT+PRRIS S+A RVS EL +L VG+ +R + + + T GIL+R++ ++
Sbjct: 488 ITQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPSRGGALLFCTVGILLRKLQSN 547
Query: 663 PLLRKYSVIMLDEVHERTIFTDILMGLLK 691
P L S +++DEVHER + TD L+ LLK
Sbjct: 548 PSLEGVSHVIVDEVHERDVNTDFLLILLK 576
Score = 83 (34.3 bits), Expect = 2.6e-16, Sum P(3) = 2.6e-16
Identities = 18/46 (39%), Positives = 28/46 (60%)
Query: 2 TEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILMECSRKFSRL 47
T GIL+ +PS+E S +++D+VHER + TD L+ + RL
Sbjct: 536 TVGILLRKLQSNPSLEGVSHVIVDEVHERDVNTDFLLILLKGLQRL 581
Score = 70 (29.7 bits), Expect = 2.6e-16, Sum P(3) = 2.6e-16
Identities = 18/56 (32%), Positives = 29/56 (51%)
Query: 343 LKPLKRTQ--LKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYYSND 396
LK L+R L+L++ SAT D E +++ ++ V G +YPV +Y D
Sbjct: 575 LKGLQRLNPALRLVLMSATGDNERFSRYFG-----GCPVIKVPGFMYPVKEHYLED 625
Score = 40 (19.1 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 10/40 (25%), Positives = 20/40 (50%)
Query: 345 PLKRTQLKLIISSATVD--AEEICQFYNISASSNATILSV 382
PL + L +I AT A+ + QF+ + + + L++
Sbjct: 243 PLPKNLLAKVIQIATSSSTAKNLMQFHTVGTKTKLSTLTL 282
>TAIR|locus:2196255 [details] [associations]
symbol:AT1G58050 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0004386
"helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:AC079604
IPI:IPI00531251 PIR:F96613 RefSeq:NP_176102.1 UniGene:At.52250
ProteinModelPortal:Q9C6G0 SMR:Q9C6G0 PaxDb:Q9C6G0 PRIDE:Q9C6G0
EnsemblPlants:AT1G58050.1 GeneID:842172 KEGG:ath:AT1G58050
TAIR:At1g58050 HOGENOM:HOG000240812 InParanoid:Q9C6G0 OMA:ISPENED
PhylomeDB:Q9C6G0 ProtClustDB:CLSN2679369 Genevestigator:Q9C6G0
Uniprot:Q9C6G0
Length = 1417
Score = 207 (77.9 bits), Expect = 2.8e-16, Sum P(4) = 2.8e-16
Identities = 52/136 (38%), Positives = 79/136 (58%)
Query: 390 SVYYSNDPVVNYVQGVVDTAI-KIHESMPVGDILAFVIGLEQIEHIIGILKQYHNQREDL 448
S+ Y VV+Y +++ I I ++ G IL F+ G+ +I ++ L + R
Sbjct: 855 SIKYIASAVVDY--DLLEELICHIDDTCEEGAILVFLPGMSEINMLLNRLAASYRFRGAS 912
Query: 449 KLLILPMHGSLPNNEQIKVFRPTPRAMRKIVIATNIAETSITIPGIVYVIDPGFVKARWF 508
+LP+H S+ + EQ KVF P+ +RK++IATNIAETSITI +VYVID G K +
Sbjct: 913 GDWLLPLHSSIASTEQKKVFLRPPKGIRKVIIATNIAETSITIEDVVYVIDSGKHKENRY 972
Query: 509 NPNTLTNSLVVVPISK 524
NP+ +S+V +SK
Sbjct: 973 NPHKKLSSMVEDWVSK 988
Score = 134 (52.2 bits), Expect = 0.00057, Sum P(2) = 0.00057
Identities = 34/101 (33%), Positives = 60/101 (59%)
Query: 604 TEPRRISVTSLANRVSEE-LRTTLGH---TVGYTIRFDDCTTEDVTKIKYMTEGILMREM 659
T+PR I+V A RV++E G V Y +R + + D T++ + T GIL+R++
Sbjct: 652 TQPRAITV---AQRVADERCEPPPGFDNSVVAYQVRHQNARS-DKTRLLFCTTGILLRKL 707
Query: 660 MTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKILKDKERD 700
+ D L+ + I++DEVHER++ D L+ +LK +++ + D
Sbjct: 708 VGDTTLKDVTHIIVDEVHERSLMGDFLLIILKSLIEKQSWD 748
Score = 118 (46.6 bits), Expect = 0.00055, Sum P(3) = 0.00055
Identities = 36/102 (35%), Positives = 56/102 (54%)
Query: 44 FSRLYTEASFSQL-NECTPPEMQRTELSSAVLQLKALGIHNILRF-SFPSPPPAQN-LRV 100
FS LYT F +L PEM R L L +K LG+ I F S PP+++ +
Sbjct: 1007 FS-LYTRHRFEKLMRPYQVPEMLRVPLVELCLHIKLLGLGQIKPFLSKALEPPSESAINS 1065
Query: 101 ALELLYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLLSSG 142
A+ LL+ +GA++ + LT P+G +A++P+ + K+LL G
Sbjct: 1066 AILLLHKVGALEGDEELT-PLGHHLAKLPVDLLIGKMLLYGG 1106
Score = 74 (31.1 bits), Expect = 2.8e-16, Sum P(4) = 2.8e-16
Identities = 15/47 (31%), Positives = 28/47 (59%)
Query: 350 QLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYYSND 396
+LK+I+ SATVDA + +++ I++ +G +PV+ Y+ D
Sbjct: 753 KLKVILMSATVDAHQFSRYFG-----QCPIITAQGRTHPVTTYFLED 794
Score = 63 (27.2 bits), Expect = 2.8e-16, Sum P(4) = 2.8e-16
Identities = 13/37 (35%), Positives = 24/37 (64%)
Query: 2 TEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILM 38
T GIL+ D +++ + I++D+VHER++ D L+
Sbjct: 699 TTGILLRKLVGDTTLKDVTHIIVDEVHERSLMGDFLL 735
Score = 45 (20.9 bits), Expect = 2.8e-16, Sum P(4) = 2.8e-16
Identities = 11/40 (27%), Positives = 20/40 (50%)
Query: 763 KQFCHKYFFNYKVLKRAAELKNQMILLLKKSSIPLVTSPR 802
+ FC F N V++ E + + +LL + I L+ P+
Sbjct: 1187 ESFCESKFLNSSVMRMMRERRVEFGMLL--ADIGLINLPK 1224
>UNIPROTKB|E1C388 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005739 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 CTD:54505 OMA:WLLYQEK
GeneTree:ENSGT00550000074257 EMBL:AADN02054528 EMBL:AADN02054529
EMBL:AADN02054530 IPI:IPI00580778 RefSeq:XP_424728.2
UniGene:Gga.12357 Ensembl:ENSGALT00000023700 GeneID:427136
KEGG:gga:427136 NextBio:20828443 Uniprot:E1C388
Length = 1372
Score = 186 (70.5 bits), Expect = 3.9e-11, Sum P(4) = 3.9e-11
Identities = 43/96 (44%), Positives = 60/96 (62%)
Query: 604 TEPRRISVTSLANRVSEELRTTLG-----HTVGYTIRFDDCTTEDVTKIKYMTEGILMRE 658
T+PRRIS SLA RV EEL G GY IR + T E T++ Y T G+L+R+
Sbjct: 629 TQPRRISAVSLATRVCEELGCESGPGGKNSLCGYQIRMESRTGE-ATRLLYCTTGVLLRK 687
Query: 659 MMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKIL 694
+ D LL S +++DEVHER++ +D L+ +LK+IL
Sbjct: 688 LQEDGLLSSISHVIVDEVHERSVHSDFLLVILKEIL 723
Score = 162 (62.1 bits), Expect = 3.4e-16, Sum P(4) = 3.4e-16
Identities = 46/158 (29%), Positives = 74/158 (46%)
Query: 419 GDILAFVIGLEQIEHIIGILKQYHNQREDL--KLLILPMHGSLPNNEQIKVFRPTPRAMR 476
G +L F+ GL I+ + ++ ++R L + ++ +H L +Q F P +R
Sbjct: 869 GAVLIFLPGLAHIQQLYDLIST--DRRFSLCDRHRLIALHSVLSTQDQAAAFTVPPLGVR 926
Query: 477 KIVIATNIAETSITIPGIVYVIDPGFVKARWFNPNTLTNSLVVVPISKXXXXXXXXXXXX 536
KIV+ATNIAET ITIP +V+VID G K ++ ++ +SL +SK
Sbjct: 927 KIVLATNIAETGITIPDVVFVIDSGRTKENRYHESSQMSSLEETFVSKASALQRQGRAGR 986
Query: 537 XXXXHVYRKNFMYNRLFIHFCVSRNIPTIPNDPKDVKC 574
+R MY R + ++P I P + C
Sbjct: 987 VRDGFCFR---MYTRDRFESFMEYSVPEILRVPLEELC 1021
Score = 92 (37.4 bits), Expect = 0.00016, Sum P(3) = 0.00016
Identities = 26/96 (27%), Positives = 45/96 (46%)
Query: 46 RLYTEASFSQLNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPS--PPPAQNLRVALE 103
R+YT F E + PE+ R L L + + + F + PP Q + A+
Sbjct: 994 RMYTRDRFESFMEYSVPEILRVPLEELCLHIMKCNLGSPEDFLSRALDPPQPQVIGNAMN 1053
Query: 104 LLYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLL 139
LL +GA +N P+G+ +A +P++ K+L+
Sbjct: 1054 LLRKIGACQLNEPKLTPLGQHLAALPVNVKIGKMLI 1089
Score = 88 (36.0 bits), Expect = 3.4e-16, Sum P(4) = 3.4e-16
Identities = 19/52 (36%), Positives = 31/52 (59%)
Query: 347 KRTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYYSNDPV 398
KR+ L LI+ SATVD+E+ ++ ++ IL + G YPV V++ D +
Sbjct: 725 KRSDLHLILMSATVDSEKFSSYF-----AHCPILRISGRSYPVEVFHVEDVI 771
Score = 72 (30.4 bits), Expect = 3.4e-16, Sum P(4) = 3.4e-16
Identities = 32/153 (20%), Positives = 67/153 (43%)
Query: 701 FECSDEIASILSLLQVQDIFIKPSSGALSLKARVLRRNFEVEQGDLLTLLNIFKFYEK-- 758
F C D +A++ +++ + F P G +A + + + + D LT+ N + ++K
Sbjct: 1094 FGCLDPVATLAAVMTEKSPFTTPI-GRKD-EADLAKSSIALAVSDHLTIYNAYLGWKKAR 1151
Query: 759 QEN----KKQFCHKYFFNYKVLKRAAELKNQMILLLKKSSIPLVTSPRNTNAVLKCLTNG 814
QE + +C + F N L ++K ++I L++ + T+ + NG
Sbjct: 1152 QEGGHRAEMTYCRRNFLNRTSLLTLEDVKQELIKLVRAAGFTAPTTQHRLDG------NG 1205
Query: 815 FFSNAAYLHYSGVYRTVRGNEDLYIHPSSVLYT 847
+ + LH + + V LY + ++YT
Sbjct: 1206 GTQSLS-LHEIALLKAVL-TAGLYDNVGKIMYT 1236
Score = 68 (29.0 bits), Expect = 3.4e-16, Sum P(4) = 3.4e-16
Identities = 12/37 (32%), Positives = 23/37 (62%)
Query: 2 TEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILM 38
T G+L+ D + S +++D+VHER++ +D L+
Sbjct: 680 TTGVLLRKLQEDGLLSSISHVIVDEVHERSVHSDFLL 716
Score = 40 (19.1 bits), Expect = 2.9e-13, Sum P(5) = 2.9e-13
Identities = 7/18 (38%), Positives = 13/18 (72%)
Query: 58 ECTPPEMQRTELSSAVLQ 75
+ TPP+ Q T L+ ++L+
Sbjct: 333 KATPPQPQETTLNLSLLE 350
Score = 40 (19.1 bits), Expect = 2.9e-13, Sum P(5) = 2.9e-13
Identities = 21/75 (28%), Positives = 32/75 (42%)
Query: 192 RRALDFPDMPYQLR-YIGQPEMGPLLLRVRRALDFPDMPYQLRYIGQPEMGVGDKARPTI 250
+ LD + Y R + G+ L+ R+ +FP P + +G K R +
Sbjct: 364 KEPLDIRNFDYSARSWTGKSPKQFLIDWCRK--NFPKSPNPA--FEKVPVGRYWKCRVRV 419
Query: 251 VRSSIDVACSC-TVV 264
RSS DV C T+V
Sbjct: 420 TRSSDDVMTMCPTIV 434
Score = 37 (18.1 bits), Expect = 1.1e-12, Sum P(4) = 1.1e-12
Identities = 17/55 (30%), Positives = 24/55 (43%)
Query: 806 AVLKC-LTNGFFSNAAYLHYSG----------VYRTVRGNEDLYIHPSSVLYTLQ 849
A+LK LT G + N + Y+ + T +G +HPSSV LQ
Sbjct: 1216 ALLKAVLTAGLYDNVGKIMYTKSVDITEKLACLVETAQGKAQ--VHPSSVNRDLQ 1268
>UNIPROTKB|I3LHZ6 [details] [associations]
symbol:DHX9 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003725
"double-stranded RNA binding" evidence=IEA] InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00358 SMART:SM00490 SMART:SM00847 InterPro:IPR014720
GO:GO:0005524 Gene3D:3.30.160.20 GO:GO:0005622 GO:GO:0003725
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GeneTree:ENSGT00550000074257 OMA:DDWIRLQ
Ensembl:ENSSSCT00000025297 Uniprot:I3LHZ6
Length = 1274
Score = 171 (65.3 bits), Expect = 3.5e-16, Sum P(4) = 3.5e-16
Identities = 45/121 (37%), Positives = 67/121 (55%)
Query: 405 VVDTAIKIHESMPV-GDILAFVIGLEQI----EHIIGILKQYHNQREDLKLLILPMHGSL 459
+++ +K E++ V G +L F+ G I +H+ + + N R ILP+H +
Sbjct: 628 LIEALLKYIETLNVPGAVLVFLPGWNLIYTMQKHL-EMNPHFGNHRYQ----ILPLHSQI 682
Query: 460 PNNEQIKVFRPTPRAMRKIVIATNIAETSITIPGIVYVIDPGFVKARWFNP-NTLTNSLV 518
P EQ KVF P P + K++++TNIAETSITI +VYVID K + F N +TN
Sbjct: 683 PREEQRKVFDPVPAGVTKVILSTNIAETSITINDVVYVIDSCKQKVKLFTAHNNMTNYAT 742
Query: 519 V 519
V
Sbjct: 743 V 743
Score = 161 (61.7 bits), Expect = 1.4e-10, Sum P(3) = 1.4e-10
Identities = 34/95 (35%), Positives = 58/95 (61%)
Query: 601 IGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTKIKYMTEGILMREMM 660
I +T+PRRIS S+A RV+ E G + GY++RF+ I + T G+L+R++
Sbjct: 436 IVVTQPRRISAVSVAERVAYERGEEPGKSCGYSVRFESILPRPHASIMFCTVGVLLRKLE 495
Query: 661 TDPLLRKYSVIMLDEVHERTIFTDILMGLLKKILK 695
+R S +++DE+HER I TD L+ +L+ +++
Sbjct: 496 AG--IRGISHVIVDEIHERDINTDFLLVVLRDVVQ 528
Score = 120 (47.3 bits), Expect = 1.6e-07, Sum P(3) = 1.6e-07
Identities = 32/95 (33%), Positives = 48/95 (50%)
Query: 47 LYTEASFSQLNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPS--PPPAQNLRVALEL 104
L + A F +L PEM RT L L +K L + I +F + PPP + A
Sbjct: 768 LCSRARFDRLETHMTPEMFRTPLHEIALSIKLLRLGGIGQFLAKAIEPPPLDAVIEAEHT 827
Query: 105 LYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLL 139
L L A+D N LT P+G +A++P+ P K+++
Sbjct: 828 LRELDALDANDELT-PLGRILAKLPIEPRFGKMMI 861
Score = 77 (32.2 bits), Expect = 3.5e-16, Sum P(4) = 3.5e-16
Identities = 14/47 (29%), Positives = 26/47 (55%)
Query: 350 QLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYYSND 396
++++++ SAT+D C+++ N I+ V G YPV Y+ D
Sbjct: 532 EVRIVLMSATIDTSMFCEYF-----FNCPIIEVYGRTYPVQEYFLED 573
Score = 77 (32.2 bits), Expect = 3.5e-16, Sum P(4) = 3.5e-16
Identities = 43/160 (26%), Positives = 65/160 (40%)
Query: 701 FECSDEIASILSLLQVQDIFIKPSSGALSLKARVLRRNFEVEQ-GDLLTLLNIFKFYEK- 758
F D I +I + + FI S G + + RNF + D + LL++F+ ++
Sbjct: 866 FYVGDAICTISAATCFPEPFI--SEGK---RLGYIHRNFAGNRFSDHVALLSVFQAWDDA 920
Query: 759 ----QENKKQFCHKYFFNYKVLKRAAELKNQMILLLKKSSIP---LVTS------P-RNT 804
+E + +FC N L+ E K Q+ +L S P L+T P N
Sbjct: 921 RMGGEEAEIRFCEHKRLNMATLRMTWEAKVQLKEILINSGFPEDCLLTQVFTNTGPDNNL 980
Query: 805 NAVLKCLTNGFFSNAAYLHYSGVYRTVRGNEDLYIHPSSV 844
+ V+ L G + N Y T G L IH SSV
Sbjct: 981 DVVISLLAFGVYPNVCYHKEKRKILTTEGRNAL-IHKSSV 1019
Score = 63 (27.2 bits), Expect = 3.5e-16, Sum P(4) = 3.5e-16
Identities = 15/49 (30%), Positives = 26/49 (53%)
Query: 2 TEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILMECSRKFSRLYTE 50
T G+L+ + + S +++D++HER I TD L+ R + Y E
Sbjct: 486 TVGVLLRK--LEAGIRGISHVIVDEIHERDINTDFLLVVLRDVVQAYPE 532
Score = 51 (23.0 bits), Expect = 5.5e-15, Sum P(4) = 5.5e-15
Identities = 19/67 (28%), Positives = 32/67 (47%)
Query: 62 PEMQRTELSSAVLQLKALGIHNILRFSFPSPP-PAQNLRVAL-ELLYSLGAMDVNGNLTK 119
P+ R+ ++ + +K LG R + AQ+ ++L LY LG ++ LTK
Sbjct: 201 PDHNRSFIAEMTIYIKQLGRRIFAREHGSNKKLAAQSCALSLVRQLYHLGVIEAYSGLTK 260
Query: 120 PV-GETM 125
GET+
Sbjct: 261 KKEGETV 267
>UNIPROTKB|J9P264 [details] [associations]
symbol:DHX30 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AAEX03012236 Ensembl:ENSCAFT00000047330
Uniprot:J9P264
Length = 1219
Score = 189 (71.6 bits), Expect = 3.6e-16, Sum P(3) = 3.6e-16
Identities = 62/229 (27%), Positives = 103/229 (44%)
Query: 405 VVDTAIKIHESMPVGDILAFVIGLEQIEHIIGILKQYHNQREDLKLLILPMHGSLPNNEQ 464
V D + I G IL F+ G ++I+ + L++ E K LILP+H ++P +Q
Sbjct: 686 VTDLVLHIDARGEPGGILCFLPGWQEIKGVQQRLQEALGMHES-KYLILPVHSNIPMMDQ 744
Query: 465 IKVFRPTPRAMRKIVIATNIAETSITIPGIVYVIDPGFVKARWFNPNTLTNSLVVVPISK 524
+F+ P +RKIV+ATNIAETSIT+ IV+V+D G K ++ T + L V +S+
Sbjct: 745 KAIFQQPPVGVRKIVLATNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCLETVWVSR 804
Query: 525 XXXXXXXXXXXXXXXXHVYRKNFMYNRLFIHFCVSRNIPTIPNDP-KDVKCDVMFHKVFF 583
Y ++ R + V +P I P +++ H
Sbjct: 805 ANVIQRRGRAGRCQSGFAYH---LFPRSRLEKMVPFQVPEILRTPLENLVLQAKIHMPEK 861
Query: 584 SFFQYLLEAGWCYDTKLIGITEPRRISVTSLANRVSEELRTTLGHTVGY 632
+ ++L +A D+ I + I + + E TTLG + +
Sbjct: 862 TAVEFLSKA---VDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLAH 907
Score = 176 (67.0 bits), Expect = 3.2e-08, Sum P(2) = 3.2e-08
Identities = 38/89 (42%), Positives = 56/89 (62%)
Query: 603 ITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTKIKYMTEGILMREMMTD 662
IT+PRRIS S+A RVS EL +L VG+ +R + + + T GIL+R++ ++
Sbjct: 516 ITQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCTVGILLRKLQSN 575
Query: 663 PLLRKYSVIMLDEVHERTIFTDILMGLLK 691
P L S +++DEVHER + TD L+ LLK
Sbjct: 576 PSLEGVSHVIVDEVHERDVNTDFLLILLK 604
Score = 83 (34.3 bits), Expect = 3.6e-16, Sum P(3) = 3.6e-16
Identities = 18/46 (39%), Positives = 28/46 (60%)
Query: 2 TEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILMECSRKFSRL 47
T GIL+ +PS+E S +++D+VHER + TD L+ + RL
Sbjct: 564 TVGILLRKLQSNPSLEGVSHVIVDEVHERDVNTDFLLILLKGLQRL 609
Score = 70 (29.7 bits), Expect = 3.6e-16, Sum P(3) = 3.6e-16
Identities = 18/56 (32%), Positives = 29/56 (51%)
Query: 343 LKPLKRTQ--LKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYYSND 396
LK L+R L+L++ SAT D E +++ ++ V G +YPV +Y D
Sbjct: 603 LKGLQRLNPALRLVLMSATGDNERFSRYFG-----GCPVIKVPGFMYPVKEHYLED 653
Score = 42 (19.8 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 14/59 (23%), Positives = 27/59 (45%)
Query: 327 GGQDVIGEDMKAFAEQLK-PLKRTQLKLIISSATVD--AEEICQFYNISASSNATILSV 382
GG + +D A + PL + L +I AT A+ + QF+ + + + L++
Sbjct: 252 GGSFEMTDDDSAIRALTQFPLPKNLLAKVIQIATSSSTAKNLMQFHTVGTKTKLSTLTL 310
>GENEDB_PFALCIPARUM|MAL13P1.14 [details] [associations]
symbol:MAL13P1.14 "ATP-dependent DEAD box
helicase, putative" species:5833 "Plasmodium falciparum"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 EMBL:AL844509
KO:K01509 RefSeq:XP_001349754.1 ProteinModelPortal:Q8IET8
IntAct:Q8IET8 MINT:MINT-1557718 EnsemblProtists:MAL13P1.14:mRNA
GeneID:813690 KEGG:pfa:MAL13P1.14 EuPathDB:PlasmoDB:PF3D7_1302700
HOGENOM:HOG000280744 OMA:HERSINM ProtClustDB:CLSZ2515444
Uniprot:Q8IET8
Length = 1566
Score = 247 (92.0 bits), Expect = 4.8e-16, Sum P(3) = 4.8e-16
Identities = 58/124 (46%), Positives = 83/124 (66%)
Query: 587 QYLLEAGWCYDTKLIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTK 646
Q+L E G+ + IGIT+PR+I+V S+ NR+++EL + GY IRF+ +K
Sbjct: 493 QFLYEYGFTSNDYFIGITQPRKIAVKSICNRLNDELNEEI---CGYQIRFEKSYFLKHSK 549
Query: 647 IKYMTEGILMREMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLK---KILKDKERDFEC 703
IK MTEGIL++E+M+D +L KYSVI+LDE HER+I DI++G+L KI D +F+
Sbjct: 550 IKVMTEGILLKEIMSDFILSKYSVIILDEAHERSINMDIIIGILSIISKIRNDNYYNFK- 608
Query: 704 SDEI 707
SD I
Sbjct: 609 SDII 612
Score = 110 (43.8 bits), Expect = 3.6e-11, Sum P(5) = 3.6e-11
Identities = 25/75 (33%), Positives = 43/75 (57%)
Query: 450 LLILPMHGSLPNNEQIKVFRPTPRAMRKIVIATNIAETSITIPGIVYVIDPGFVKARWFN 509
L + ++ LP +Q+++F R +++TNIAETS+T+P I YVID G K + ++
Sbjct: 882 LKVFKLYSKLPMKDQMELFHNPKENERVCILSTNIAETSLTLPNIRYVIDCGKEKRKIYS 941
Query: 510 PNTLTNSLVVVPISK 524
+ ++ ISK
Sbjct: 942 NLNDYSYYIIDNISK 956
Score = 96 (38.9 bits), Expect = 3.6e-11, Sum P(5) = 3.6e-11
Identities = 22/61 (36%), Positives = 37/61 (60%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILMECSRKFSRLYTEASFSQLNECT 60
MTEGIL++ D + KYSVI+LD+ HER+I DI++ S++ + ++ ++
Sbjct: 553 MTEGILLKEIMSDFILSKYSVIILDEAHERSINMDIIIGILSIISKIRNDNYYNFKSDII 612
Query: 61 P 61
P
Sbjct: 613 P 613
Score = 86 (35.3 bits), Expect = 3.6e-11, Sum P(5) = 3.6e-11
Identities = 24/88 (27%), Positives = 44/88 (50%)
Query: 351 LKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYYSNDPVVNYVQGVVDTAI 410
+K+II SAT++ + F N N T +++ V ++ + +YV+ I
Sbjct: 614 IKIIIMSATINDNNL--FQN-KIFQNFTTVNIPTQKVQVIDHFLSYTPKDYVEEAKRKII 670
Query: 411 KIHESMPVGDILAFVIGLEQIEHIIGIL 438
+IH+ +P G IL F+ E+I + +L
Sbjct: 671 QIHKKLPQGSILVFLTSQEEIYRLYNML 698
Score = 52 (23.4 bits), Expect = 4.8e-16, Sum P(3) = 4.8e-16
Identities = 15/55 (27%), Positives = 28/55 (50%)
Query: 738 NFEVE-QGDLLTLLNIF-KFYEKQENKKQFCHKYFFNYKVLKRAAELKNQMILLL 790
NF+ + D+L LNI KFY ++ + + C + K + +L N +I ++
Sbjct: 1246 NFKEQFDNDILFYLNICTKFYFSKD-RNETCQIMHLDKKKMNELLKLSNHLIKII 1299
Score = 43 (20.2 bits), Expect = 4.8e-16, Sum P(3) = 4.8e-16
Identities = 10/19 (52%), Positives = 12/19 (63%)
Query: 828 YRTVRGNEDLYIHPSSVLY 846
Y T N +YI+ SSVLY
Sbjct: 1361 YITQNMNMPIYINSSSVLY 1379
Score = 39 (18.8 bits), Expect = 1.0e-14, Sum P(3) = 1.0e-14
Identities = 12/37 (32%), Positives = 16/37 (43%)
Query: 750 LNIFKFYEKQENKKQFCHKYFFNYKVLKRAAELKNQM 786
L +FK Y K K Q + F N K +R L +
Sbjct: 882 LKVFKLYSKLPMKDQM--ELFHNPKENERVCILSTNI 916
>UNIPROTKB|Q8IET8 [details] [associations]
symbol:MAL13P1.14 "ATP dependent DEAD-box helicase,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 EMBL:AL844509
KO:K01509 RefSeq:XP_001349754.1 ProteinModelPortal:Q8IET8
IntAct:Q8IET8 MINT:MINT-1557718 EnsemblProtists:MAL13P1.14:mRNA
GeneID:813690 KEGG:pfa:MAL13P1.14 EuPathDB:PlasmoDB:PF3D7_1302700
HOGENOM:HOG000280744 OMA:HERSINM ProtClustDB:CLSZ2515444
Uniprot:Q8IET8
Length = 1566
Score = 247 (92.0 bits), Expect = 4.8e-16, Sum P(3) = 4.8e-16
Identities = 58/124 (46%), Positives = 83/124 (66%)
Query: 587 QYLLEAGWCYDTKLIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTK 646
Q+L E G+ + IGIT+PR+I+V S+ NR+++EL + GY IRF+ +K
Sbjct: 493 QFLYEYGFTSNDYFIGITQPRKIAVKSICNRLNDELNEEI---CGYQIRFEKSYFLKHSK 549
Query: 647 IKYMTEGILMREMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLK---KILKDKERDFEC 703
IK MTEGIL++E+M+D +L KYSVI+LDE HER+I DI++G+L KI D +F+
Sbjct: 550 IKVMTEGILLKEIMSDFILSKYSVIILDEAHERSINMDIIIGILSIISKIRNDNYYNFK- 608
Query: 704 SDEI 707
SD I
Sbjct: 609 SDII 612
Score = 110 (43.8 bits), Expect = 3.6e-11, Sum P(5) = 3.6e-11
Identities = 25/75 (33%), Positives = 43/75 (57%)
Query: 450 LLILPMHGSLPNNEQIKVFRPTPRAMRKIVIATNIAETSITIPGIVYVIDPGFVKARWFN 509
L + ++ LP +Q+++F R +++TNIAETS+T+P I YVID G K + ++
Sbjct: 882 LKVFKLYSKLPMKDQMELFHNPKENERVCILSTNIAETSLTLPNIRYVIDCGKEKRKIYS 941
Query: 510 PNTLTNSLVVVPISK 524
+ ++ ISK
Sbjct: 942 NLNDYSYYIIDNISK 956
Score = 96 (38.9 bits), Expect = 3.6e-11, Sum P(5) = 3.6e-11
Identities = 22/61 (36%), Positives = 37/61 (60%)
Query: 1 MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILMECSRKFSRLYTEASFSQLNECT 60
MTEGIL++ D + KYSVI+LD+ HER+I DI++ S++ + ++ ++
Sbjct: 553 MTEGILLKEIMSDFILSKYSVIILDEAHERSINMDIIIGILSIISKIRNDNYYNFKSDII 612
Query: 61 P 61
P
Sbjct: 613 P 613
Score = 86 (35.3 bits), Expect = 3.6e-11, Sum P(5) = 3.6e-11
Identities = 24/88 (27%), Positives = 44/88 (50%)
Query: 351 LKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYYSNDPVVNYVQGVVDTAI 410
+K+II SAT++ + F N N T +++ V ++ + +YV+ I
Sbjct: 614 IKIIIMSATINDNNL--FQN-KIFQNFTTVNIPTQKVQVIDHFLSYTPKDYVEEAKRKII 670
Query: 411 KIHESMPVGDILAFVIGLEQIEHIIGIL 438
+IH+ +P G IL F+ E+I + +L
Sbjct: 671 QIHKKLPQGSILVFLTSQEEIYRLYNML 698
Score = 52 (23.4 bits), Expect = 4.8e-16, Sum P(3) = 4.8e-16
Identities = 15/55 (27%), Positives = 28/55 (50%)
Query: 738 NFEVE-QGDLLTLLNIF-KFYEKQENKKQFCHKYFFNYKVLKRAAELKNQMILLL 790
NF+ + D+L LNI KFY ++ + + C + K + +L N +I ++
Sbjct: 1246 NFKEQFDNDILFYLNICTKFYFSKD-RNETCQIMHLDKKKMNELLKLSNHLIKII 1299
Score = 43 (20.2 bits), Expect = 4.8e-16, Sum P(3) = 4.8e-16
Identities = 10/19 (52%), Positives = 12/19 (63%)
Query: 828 YRTVRGNEDLYIHPSSVLY 846
Y T N +YI+ SSVLY
Sbjct: 1361 YITQNMNMPIYINSSSVLY 1379
Score = 39 (18.8 bits), Expect = 1.0e-14, Sum P(3) = 1.0e-14
Identities = 12/37 (32%), Positives = 16/37 (43%)
Query: 750 LNIFKFYEKQENKKQFCHKYFFNYKVLKRAAELKNQM 786
L +FK Y K K Q + F N K +R L +
Sbjct: 882 LKVFKLYSKLPMKDQM--ELFHNPKENERVCILSTNI 916
>UNIPROTKB|Q8TE96 [details] [associations]
symbol:DQX1 "ATP-dependent RNA helicase DQX1" species:9606
"Homo sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001650 InterPro:IPR007502 Pfam:PF04408 PROSITE:PS51194
SMART:SM00847 GO:GO:0005524 GO:GO:0005634 GO:GO:0003676
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 HOGENOM:HOG000175261
EMBL:AC005041 HOVERGEN:HBG039428 CTD:165545 KO:K14433 OMA:CGQAVQA
OrthoDB:EOG4548Z3 EMBL:AK074337 EMBL:AK092420 EMBL:BC075018
IPI:IPI00385794 IPI:IPI00843897 IPI:IPI00844595 RefSeq:NP_598376.2
UniGene:Hs.191705 ProteinModelPortal:Q8TE96 SMR:Q8TE96
STRING:Q8TE96 PhosphoSite:Q8TE96 DMDM:145558898 PaxDb:Q8TE96
PRIDE:Q8TE96 Ensembl:ENST00000393951 Ensembl:ENST00000404568
GeneID:165545 KEGG:hsa:165545 UCSC:uc010yrw.2 GeneCards:GC02M074745
H-InvDB:HIX0200286 HGNC:HGNC:20410 HPA:HPA039158 neXtProt:NX_Q8TE96
PharmGKB:PA134916600 InParanoid:Q8TE96 GenomeRNAi:165545
NextBio:88548 ArrayExpress:Q8TE96 Bgee:Q8TE96 CleanEx:HS_DQX1
Genevestigator:Q8TE96 Uniprot:Q8TE96
Length = 717
Score = 163 (62.4 bits), Expect = 5.0e-16, Sum P(2) = 5.0e-16
Identities = 34/97 (35%), Positives = 62/97 (63%)
Query: 601 IGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTKIKYMTEGILMREMM 660
+ +T+P ++ SLA RV++E+ TLGH VGY+I +DCT + T +++ + +L++E+
Sbjct: 98 VTVTQPYPLAARSLALRVADEMDLTLGHEVGYSIPQEDCTGPN-TLLRFCWDRLLLQEVA 156
Query: 661 TDPLLRKYSVIMLDEVHERTIFTDILMGLLKKILKDK 697
+ + V++LDE ER++ +D L GLL+ +K
Sbjct: 157 STRGTGAWGVLVLDEAQERSVASDSLQGLLQDARLEK 193
Score = 125 (49.1 bits), Expect = 5.0e-16, Sum P(2) = 5.0e-16
Identities = 35/136 (25%), Positives = 68/136 (50%)
Query: 689 LLKKILKDKERDFECSDEIASILSLLQVQDIFIKPSSGALSLKARVLRRNFEVEQGDLLT 748
L K +L E F+C DE+ ++ ++L F +P LS + LRR E GD +
Sbjct: 474 LAKALLASCE--FDCVDEMLTLAAMLTAAPGFTRPP---LSAEEAALRRALEHTDGDHSS 528
Query: 749 LLNIFKFYEKQENKKQFCHKYFFNYKVLKRAAELKNQMILLLKKSSIPLVT----SPRNT 804
L+ +++ + + + +C N+ L +A +L+ +++ L+++ +PL S +N
Sbjct: 529 LIQVYEAFIQSGADEAWCQARGLNWAALCQAHKLRGELLELMQRIELPLSLPAFGSEQNR 588
Query: 805 NAVLKCLTNGFFSNAA 820
+ K L +G+F A
Sbjct: 589 RDLQKALVSGYFLKVA 604
Score = 99 (39.9 bits), Expect = 6.8e-09, Sum P(3) = 6.8e-09
Identities = 36/140 (25%), Positives = 62/140 (44%)
Query: 388 PVSVYYSNDPVVNYVQGVVDTAIKI-HESMPVGDILAFVIGLEQIEHIIGILKQYHNQR- 445
P +Y+ P + V+ +++ + +P GD+L F+ E+I L +
Sbjct: 232 PSPIYWDTIPP-DRVEAACQAVLELCRKELP-GDVLVFLPSEEEISLCCESLSREVESLL 289
Query: 446 -EDLKLLILPMHGSLPNNEQIKVFRPTPRAMRKIVIATNIAETSITIPGIVYVIDPGFVK 504
+ L +LP+H Q V+ RK+V+ +A+ S ++P I +VID G
Sbjct: 290 LQGLPPRVLPLHPDCGRAVQA-VYEDMDA--RKVVVTHWLADFSFSLPSIQHVIDSGLEL 346
Query: 505 ARWFNPNTLTNSLVVVPISK 524
+NP V+ PISK
Sbjct: 347 RSVYNPRIRAEFQVLRPISK 366
Score = 98 (39.6 bits), Expect = 8.5e-09, Sum P(3) = 8.5e-09
Identities = 38/98 (38%), Positives = 50/98 (51%)
Query: 47 LYTEASFSQLNECTP---PEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRVALE 103
LY + SF +L E P P + LSS VL LK I F P + L ALE
Sbjct: 387 LYPK-SFLEL-EAPPLPQPRVCEENLSSLVLLLKRRQIAEPGECHFLDQPAPEALMQALE 444
Query: 104 LLYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLLSS 141
L L A+D +G+L+ +G ++E PL P AK LL+S
Sbjct: 445 DLDYLAALDDDGDLSD-LGVILSEFPLAPELAKALLAS 481
Score = 41 (19.5 bits), Expect = 6.8e-09, Sum P(3) = 6.8e-09
Identities = 7/19 (36%), Positives = 14/19 (73%)
Query: 19 YSVIMLDKVHERTIFTDIL 37
+ V++LD+ ER++ +D L
Sbjct: 164 WGVLVLDEAQERSVASDSL 182
>RGD|1591766 [details] [associations]
symbol:Dqx1 "DEAQ box RNA-dependent ATPase 1" species:10116
"Rattus norvegicus" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 Pfam:PF04408 PROSITE:PS51194 SMART:SM00847
RGD:1591766 GO:GO:0005524 GO:GO:0003676 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:CH473957
InterPro:IPR011709 Pfam:PF07717 GeneTree:ENSGT00650000093246
CTD:165545 KO:K14433 OMA:CGQAVQA OrthoDB:EOG4548Z3 IPI:IPI00194915
RefSeq:NP_001102877.1 UniGene:Rn.154059 Ensembl:ENSRNOT00000011002
GeneID:680434 KEGG:rno:680434 UCSC:RGD:1591766 NextBio:718702
Uniprot:D4A474
Length = 717
Score = 174 (66.3 bits), Expect = 5.7e-16, Sum P(2) = 5.7e-16
Identities = 35/105 (33%), Positives = 68/105 (64%)
Query: 587 QYLLEAGWCYDTKLIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTK 646
++ L G + T + +T+P ++ SLA+RV++E+ TLGH +GY+I +DCT + T
Sbjct: 83 EFALARG--FQTGQVTVTQPYPLAAMSLASRVADEMDLTLGHEIGYSIPQEDCTGPN-TM 139
Query: 647 IKYMTEGILMREMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLK 691
+++ + + ++E+ + +SV++LDE ER++ +D+L GLL+
Sbjct: 140 LRFCWDRLFLQEVASTRGPGAWSVLVLDEAQERSVASDLLQGLLR 184
Score = 113 (44.8 bits), Expect = 5.7e-16, Sum P(2) = 5.7e-16
Identities = 33/136 (24%), Positives = 66/136 (48%)
Query: 689 LLKKILKDKERDFECSDEIASILSLLQVQDIFIKPSSGALSLKARVLRRNFEVEQGDLLT 748
L K +L E F C DE+ ++ ++L F +P L LRR E GD +
Sbjct: 474 LAKALLASCE--FNCVDEMLTLAAMLTAAPGFTRPP---LCAGEAALRRGLEHADGDHSS 528
Query: 749 LLNIFKFYEKQENKKQFCHKYFFNYKVLKRAAELKNQMILLLKKSSIPLVT----SPRNT 804
L+ +++ + + + +C +++ L +A +L+ +++ L+++ +PL S +N
Sbjct: 529 LIQVYEAFVQSGADETWCQARGLSWEALCQARKLRAELLELMQRIELPLSLPAFGSEQNR 588
Query: 805 NAVLKCLTNGFFSNAA 820
+ K L +G+F A
Sbjct: 589 RDLQKALLSGYFLKVA 604
Score = 98 (39.6 bits), Expect = 2.5e-08, Sum P(3) = 2.5e-08
Identities = 35/97 (36%), Positives = 50/97 (51%)
Query: 46 RLYTEASFSQLNECTP-PEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRVALEL 104
RLY++++ P P++ LSS VL LK I F P + L ALE
Sbjct: 386 RLYSKSTLDLEAPPLPHPKVCEENLSSLVLLLKRKQIAEPGECHFLDRPAPEALMQALED 445
Query: 105 LYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLLSS 141
L L A+D +G+L+ +G ++E PL P AK LL+S
Sbjct: 446 LDYLAALDDDGDLSD-LGIILSEFPLPPELAKALLAS 481
Score = 97 (39.2 bits), Expect = 3.1e-08, Sum P(3) = 3.1e-08
Identities = 38/141 (26%), Positives = 61/141 (43%)
Query: 388 PVSVYYSNDPVVNYVQGVVDTAIKI--HESMPVGDILAFVIGLEQIEHIIGILKQYHNQR 445
P Y P + V+ +++ E P GD+L ++ E+I L +
Sbjct: 229 PTLTYKDTVPA-DLVEAACQAVLELCQREEAP-GDVLVYLPSEEEISLCCESLSREMGML 286
Query: 446 EDLKLL--ILPMHGSLPNNEQIKVFRPTPRAMRKIVIATNIAETSITIPGIVYVIDPGFV 503
L +LP+H Q V+ T ++RKIV+ +A+ S ++P I +VID G
Sbjct: 287 AVPGPLPRVLPLHPGCGQAIQT-VYEDTDVSVRKIVVTHWLADFSFSLPFIQHVIDSGLE 345
Query: 504 KARWFNPNTLTNSLVVVPISK 524
+NP S V+ ISK
Sbjct: 346 LRSVYNPRIRAESQVLRRISK 366
Score = 49 (22.3 bits), Expect = 2.5e-08, Sum P(3) = 2.5e-08
Identities = 8/19 (42%), Positives = 16/19 (84%)
Query: 19 YSVIMLDKVHERTIFTDIL 37
+SV++LD+ ER++ +D+L
Sbjct: 161 WSVLVLDEAQERSVASDLL 179
>UNIPROTKB|E2RID8 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 CTD:54505
GeneTree:ENSGT00550000074257 EMBL:AAEX03001437 RefSeq:XP_535238.2
Ensembl:ENSCAFT00000010821 GeneID:478060 KEGG:cfa:478060
NextBio:20853441 Uniprot:E2RID8
Length = 1367
Score = 179 (68.1 bits), Expect = 2.9e-10, Sum P(3) = 2.9e-10
Identities = 41/99 (41%), Positives = 62/99 (62%)
Query: 604 TEPRRISVTSLANRVSEELRTTLG-----HTVGYTIRFDDCTTEDVTKIKYMTEGILMRE 658
T+PRRIS SLA RV +EL G GY IR + +E T++ Y T G+L+R+
Sbjct: 625 TQPRRISAVSLATRVCDELGCENGPGGRNSLCGYQIRMESRASES-TRLLYCTTGVLLRK 683
Query: 659 MMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKILKDK 697
+ D LL S +++DEVHER++ +D L+ +LK+IL+ +
Sbjct: 684 LQEDGLLTNVSHVIVDEVHERSVQSDFLLIILKEILQKR 722
Score = 170 (64.9 bits), Expect = 6.1e-16, Sum P(4) = 6.1e-16
Identities = 46/156 (29%), Positives = 72/156 (46%)
Query: 419 GDILAFVIGLEQIEHIIGILKQYHNQREDLKLLILPMHGSLPNNEQIKVFRPTPRAMRKI 478
G +L F+ GL I+ + +L + + ++ +H L +Q F P +RKI
Sbjct: 865 GAVLIFLPGLAHIQQLYDLLSTDRRFFSE-RYKVIALHSILSTQDQAAAFTLPPPGVRKI 923
Query: 479 VIATNIAETSITIPGIVYVIDPGFVKARWFNPNTLTNSLVVVPISKXXXXXXXXXXXXXX 538
V+ATNIAET ITIP +V+VID G K ++ ++ +SLV +SK
Sbjct: 924 VLATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQGRAGRVR 983
Query: 539 XXHVYRKNFMYNRLFIHFCVSRNIPTIPNDPKDVKC 574
+R MY R + ++P I P + C
Sbjct: 984 DGFCFR---MYTRERFEGFMDYSVPEILRVPLEELC 1016
Score = 87 (35.7 bits), Expect = 6.1e-16, Sum P(4) = 6.1e-16
Identities = 20/52 (38%), Positives = 31/52 (59%)
Query: 347 KRTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYYSNDPV 398
KR+ L LI+ SATVD+E+ ++ ++ IL + G YPV V++ D V
Sbjct: 721 KRSDLHLILMSATVDSEKFSTYF-----THCPILRISGRSYPVEVFHLEDIV 767
Score = 65 (27.9 bits), Expect = 6.1e-16, Sum P(4) = 6.1e-16
Identities = 12/37 (32%), Positives = 23/37 (62%)
Query: 2 TEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILM 38
T G+L+ D + S +++D+VHER++ +D L+
Sbjct: 676 TTGVLLRKLQEDGLLTNVSHVIVDEVHERSVQSDFLL 712
Score = 65 (27.9 bits), Expect = 6.1e-16, Sum P(4) = 6.1e-16
Identities = 23/106 (21%), Positives = 50/106 (47%)
Query: 701 FECSDEIASILSLLQVQDIFIKPSSGALSLKARVLRRNFEVEQGDLLTLLNIFKFYEK-- 758
F C D +A++ +++ + F P G +A + + + D LT+ N + ++K
Sbjct: 1089 FGCLDPVATLAAVMTEKSPFTTPI-GRKD-EADLAKSALAMADSDHLTIYNAYLGWKKAR 1146
Query: 759 QE----NKKQFCHKYFFNYKVLKRAAELKNQMILLLKKSSIPLVTS 800
QE ++ +C + F N L ++K +++ L+K + T+
Sbjct: 1147 QEGGYRSEIAYCRRNFLNRTSLLTLEDVKQELMKLVKAAGFSSSTT 1192
Score = 42 (19.8 bits), Expect = 2.9e-10, Sum P(3) = 2.9e-10
Identities = 9/27 (33%), Positives = 15/27 (55%)
Query: 421 ILAFVIGLEQIEHIIGILKQYHNQRED 447
IL VI + + IIG++ ++ Q D
Sbjct: 83 ILKVVINHKLEQRIIGVINEHKKQNND 109
Score = 37 (18.1 bits), Expect = 1.9e-07, Sum P(3) = 1.9e-07
Identities = 7/21 (33%), Positives = 11/21 (52%)
Query: 755 FYEKQENKKQFCHKYFFNYKV 775
FY+K N+ Q Y +K+
Sbjct: 822 FYQKYSNRTQHAILYMNPHKI 842
>UNIPROTKB|J9P6V4 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 OMA:WLLYQEK
GeneTree:ENSGT00550000074257 EMBL:AAEX03001437
Ensembl:ENSCAFT00000043416 Uniprot:J9P6V4
Length = 1369
Score = 179 (68.1 bits), Expect = 2.9e-10, Sum P(3) = 2.9e-10
Identities = 41/99 (41%), Positives = 62/99 (62%)
Query: 604 TEPRRISVTSLANRVSEELRTTLG-----HTVGYTIRFDDCTTEDVTKIKYMTEGILMRE 658
T+PRRIS SLA RV +EL G GY IR + +E T++ Y T G+L+R+
Sbjct: 625 TQPRRISAVSLATRVCDELGCENGPGGRNSLCGYQIRMESRASES-TRLLYCTTGVLLRK 683
Query: 659 MMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKILKDK 697
+ D LL S +++DEVHER++ +D L+ +LK+IL+ +
Sbjct: 684 LQEDGLLTNVSHVIVDEVHERSVQSDFLLIILKEILQKR 722
Score = 170 (64.9 bits), Expect = 6.1e-16, Sum P(4) = 6.1e-16
Identities = 46/156 (29%), Positives = 72/156 (46%)
Query: 419 GDILAFVIGLEQIEHIIGILKQYHNQREDLKLLILPMHGSLPNNEQIKVFRPTPRAMRKI 478
G +L F+ GL I+ + +L + + ++ +H L +Q F P +RKI
Sbjct: 868 GAVLIFLPGLAHIQQLYDLLSTDRRFFSE-RYKVIALHSILSTQDQAAAFTLPPPGVRKI 926
Query: 479 VIATNIAETSITIPGIVYVIDPGFVKARWFNPNTLTNSLVVVPISKXXXXXXXXXXXXXX 538
V+ATNIAET ITIP +V+VID G K ++ ++ +SLV +SK
Sbjct: 927 VLATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQGRAGRVR 986
Query: 539 XXHVYRKNFMYNRLFIHFCVSRNIPTIPNDPKDVKC 574
+R MY R + ++P I P + C
Sbjct: 987 DGFCFR---MYTRERFEGFMDYSVPEILRVPLEELC 1019
Score = 87 (35.7 bits), Expect = 6.1e-16, Sum P(4) = 6.1e-16
Identities = 20/52 (38%), Positives = 31/52 (59%)
Query: 347 KRTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYYSNDPV 398
KR+ L LI+ SATVD+E+ ++ ++ IL + G YPV V++ D V
Sbjct: 721 KRSDLHLILMSATVDSEKFSTYF-----THCPILRISGRSYPVEVFHLEDIV 767
Score = 65 (27.9 bits), Expect = 6.1e-16, Sum P(4) = 6.1e-16
Identities = 12/37 (32%), Positives = 23/37 (62%)
Query: 2 TEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILM 38
T G+L+ D + S +++D+VHER++ +D L+
Sbjct: 676 TTGVLLRKLQEDGLLTNVSHVIVDEVHERSVQSDFLL 712
Score = 65 (27.9 bits), Expect = 6.1e-16, Sum P(4) = 6.1e-16
Identities = 23/106 (21%), Positives = 50/106 (47%)
Query: 701 FECSDEIASILSLLQVQDIFIKPSSGALSLKARVLRRNFEVEQGDLLTLLNIFKFYEK-- 758
F C D +A++ +++ + F P G +A + + + D LT+ N + ++K
Sbjct: 1092 FGCLDPVATLAAVMTEKSPFTTPI-GRKD-EADLAKSALAMADSDHLTIYNAYLGWKKAR 1149
Query: 759 QE----NKKQFCHKYFFNYKVLKRAAELKNQMILLLKKSSIPLVTS 800
QE ++ +C + F N L ++K +++ L+K + T+
Sbjct: 1150 QEGGYRSEIAYCRRNFLNRTSLLTLEDVKQELMKLVKAAGFSSSTT 1195
Score = 42 (19.8 bits), Expect = 2.9e-10, Sum P(3) = 2.9e-10
Identities = 9/27 (33%), Positives = 15/27 (55%)
Query: 421 ILAFVIGLEQIEHIIGILKQYHNQRED 447
IL VI + + IIG++ ++ Q D
Sbjct: 83 ILKVVINHKLEQRIIGVINEHKKQNND 109
Score = 37 (18.1 bits), Expect = 1.9e-07, Sum P(3) = 1.9e-07
Identities = 7/21 (33%), Positives = 11/21 (52%)
Query: 755 FYEKQENKKQFCHKYFFNYKV 775
FY+K N+ Q Y +K+
Sbjct: 822 FYQKYSNRTQHAILYMNPHKI 842
>UNIPROTKB|E2QXW1 [details] [associations]
symbol:DQX1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0004386 "helicase activity" evidence=IEA]
InterPro:IPR007502 Pfam:PF04408 SMART:SM00847 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 InterPro:IPR011709 Pfam:PF07717
GeneTree:ENSGT00650000093246 CTD:165545 KO:K14433 OMA:CGQAVQA
EMBL:AAEX03010965 RefSeq:XP_532994.2 Ensembl:ENSCAFT00000013395
GeneID:475784 KEGG:cfa:475784 NextBio:20851558 Uniprot:E2QXW1
Length = 719
Score = 164 (62.8 bits), Expect = 8.1e-16, Sum P(2) = 8.1e-16
Identities = 33/91 (36%), Positives = 60/91 (65%)
Query: 601 IGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTKIKYMTEGILMREMM 660
+ +T+P ++ SLA RV++E+ TLG VGY+I +DCT D T +++ + +L++E+
Sbjct: 98 VTVTQPYPLAALSLAVRVADEMDLTLGQEVGYSIPQEDCTGPD-TLLRFCWDRLLLQEVA 156
Query: 661 TDPLLRKYSVIMLDEVHERTIFTDILMGLLK 691
+ + V++LDE ER++ +D+L GLL+
Sbjct: 157 STRGTGAWGVLVLDEAQERSVASDLLQGLLR 187
Score = 122 (48.0 bits), Expect = 8.1e-16, Sum P(2) = 8.1e-16
Identities = 35/136 (25%), Positives = 67/136 (49%)
Query: 689 LLKKILKDKERDFECSDEIASILSLLQVQDIFIKPSSGALSLKARVLRRNFEVEQGDLLT 748
L K +L E F+C DE+ ++ ++L F P LS + LRR E GD +
Sbjct: 476 LAKALLASCE--FDCVDEMLTLAAMLTAAPGFTHPP---LSAEEAALRRALEHADGDHSS 530
Query: 749 LLNIFKFYEKQENKKQFCHKYFFNYKVLKRAAELKNQMILLLKKSSIPLVT----SPRNT 804
L+ +++ + + + +C N+ L +A +L+ +++ L+++ +PL S +N
Sbjct: 531 LIQVYEAFIQSGADEAWCQARGLNWAALCQAQKLRGELLELMQQIELPLSQPAFGSEQNR 590
Query: 805 NAVLKCLTNGFFSNAA 820
+ K L +G+F A
Sbjct: 591 RDLQKALVSGYFLKVA 606
Score = 105 (42.0 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 38/97 (39%), Positives = 48/97 (49%)
Query: 47 LYTEASFSQLNE--CTPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRVALEL 104
LY E SF +L PP + LS VL LK I F P + L ALE
Sbjct: 389 LYPE-SFLELEAPLLPPPRVCEENLSPMVLLLKRRQIAEPGECHFLDRPAPEALMQALED 447
Query: 105 LYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLLSS 141
L L A+D +GNL+ +G ++E PL P AK LL+S
Sbjct: 448 LDYLAALDDDGNLSD-LGVILSEFPLPPELAKALLAS 483
Score = 102 (41.0 bits), Expect = 1.8e-09, Sum P(3) = 1.8e-09
Identities = 42/157 (26%), Positives = 68/157 (43%)
Query: 376 NATILSV-KGH-LYPVSVYYSNDPVVNYVQGVVDTAIKIHESMPVGDILAFVIGLEQIEH 433
N TI+ V +G P VY P + V+ +++ GD+L + L E
Sbjct: 218 NPTIVHVPRGPGACPTPVYRDIVPT-DRVEAACQAVLELCAKEAPGDVLVY---LPSEEE 273
Query: 434 IIGILKQYHNQREDLKLL-----ILPMH-GSLPNNEQIKVFRPTPRAMRKIVIATNIAET 487
I+ + + E L L +LP+H G P + + RK+V+ +A+
Sbjct: 274 ILQCCESLSREVEPLALRGPPPRVLPLHPGHGPAVQA--AYEDIDLGARKVVVTHWLADF 331
Query: 488 SITIPGIVYVIDPGFVKARWFNPNTLTNSLVVVPISK 524
S ++P I +VID G +NP S V+ PIS+
Sbjct: 332 SFSLPSIRHVIDSGLELRSVYNPQIRAESQVLRPISR 368
Score = 47 (21.6 bits), Expect = 1.8e-09, Sum P(3) = 1.8e-09
Identities = 12/47 (25%), Positives = 26/47 (55%)
Query: 19 YSVIMLDKVHERTIFTDILMECSRKFSRLYTEASFSQLNECTPPEMQ 65
+ V++LD+ ER++ +D+L R ++L S++ T P ++
Sbjct: 164 WGVLVLDEAQERSVASDLLQGLLRN-AKLGNLPGDSRVVVVTDPALE 209
>TAIR|locus:2008144 [details] [associations]
symbol:AT1G48650 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0003723
"RNA binding" evidence=IEA] [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00358 SMART:SM00490 SMART:SM00847 InterPro:IPR014720
EMBL:CP002684 GO:GO:0005524 Gene3D:3.30.160.20 GO:GO:0005622
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K14442
IPI:IPI00938568 RefSeq:NP_001154411.1 UniGene:At.22775
ProteinModelPortal:F4HYJ6 SMR:F4HYJ6 PRIDE:F4HYJ6
EnsemblPlants:AT1G48650.2 GeneID:841287 KEGG:ath:AT1G48650
OMA:GRIAYND Uniprot:F4HYJ6
Length = 1206
Score = 193 (73.0 bits), Expect = 8.4e-16, Sum P(3) = 8.4e-16
Identities = 68/199 (34%), Positives = 104/199 (52%)
Query: 330 DVIGEDMKAFAEQLKPLKRTQLKLIISSATVDAEEICQF--YNISASSNATILSVKGHLY 387
D GE+ K + Q K + + K +ISSA DA E F YN + + S
Sbjct: 505 DDYGEE-KTWKMQ-KQAQFKKRKSLISSAVEDALEAADFKGYNFRTRDSLSCWS------ 556
Query: 388 PVSVYYSNDPVVNYVQGVVDTAIKIHESMPVGDILAFVIGLEQIEHIIGILKQYHNQRED 447
P S+ + N ++ V+ +K P G +L F+ G + I + L+ + +
Sbjct: 557 PDSIGF------NLIENVLCHIVK--GERP-GAVLVFMTGWDDINSLKNQLEAHSLLGDP 607
Query: 448 LKLLILPMHGSLPNNEQIKVFRPTPRAMRKIVIATNIAETSITIPGIVYVIDPGFVKARW 507
K+L+L HGS+ ++EQ +F P +RKIV+ATN+AETSITI +VYVID G KA+
Sbjct: 608 NKVLLLACHGSMASSEQRLIFDRPPEGIRKIVLATNMAETSITINDVVYVIDCG--KAKE 665
Query: 508 FNPNTLTNSLVVVP--ISK 524
+ + L N+ ++P ISK
Sbjct: 666 TSYDALNNTPCLLPSWISK 684
Score = 167 (63.8 bits), Expect = 1.9e-12, Sum P(2) = 1.9e-12
Identities = 33/91 (36%), Positives = 58/91 (63%)
Query: 604 TEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTKIKYMTEGILMREMMTDP 663
T+PRRIS S++ RV+ E +G +VGY +R + D T++ + T G+L+R ++ D
Sbjct: 354 TQPRRISAISVSERVAAERGEQIGESVGYKVRLEGMRGRD-TRLLFCTTGVLLRRLLVDR 412
Query: 664 LLRKYSVIMLDEVHERTIFTDILMGLLKKIL 694
L+ + +++DE+HER + D L+ +LK +L
Sbjct: 413 SLKGVTHVVVDEIHERGMNEDFLLIVLKDLL 443
Score = 140 (54.3 bits), Expect = 3.5e-10, Sum P(3) = 3.5e-10
Identities = 37/103 (35%), Positives = 61/103 (59%)
Query: 39 ECSRKFSRLYTEASFSQLNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPS--PPPAQ 96
EC + R EA F+ + PE+ RT L S LQ+K+LG+ +I F + PP A
Sbjct: 701 ECYHLYPRCVYEA-FADYQQ---PELLRTPLQSLCLQIKSLGLGSISEFLSRALQPPEAL 756
Query: 97 NLRVALELLYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLL 139
+++ A+E L +GA+D + NLT P+G+ ++ +P+ P K+L+
Sbjct: 757 SVQNAVEYLKIIGALDDDENLT-PLGKNLSMLPVEPKLGKMLI 798
Score = 92 (37.4 bits), Expect = 8.4e-16, Sum P(3) = 8.4e-16
Identities = 29/99 (29%), Positives = 49/99 (49%)
Query: 701 FECSDEIASILSLLQVQDIFIKPSSGALSLKARVLRRNFEV-EQGDLLTLL---NIFKFY 756
F C D + ++++ L V+D F+ P L A R F + D LTL+ N +K
Sbjct: 803 FNCLDPVMTVVAGLSVRDPFLMPFDKK-DL-AETARSKFSGRDYSDHLTLVRAYNGWKDA 860
Query: 757 EKQENKKQFCHKYFFNYKVLKRAAELKNQMILLLKKSSI 795
E+ + +C K F + + LK ++ Q LLK++S+
Sbjct: 861 ERTHSGYDYCWKNFLSSQTLKAMDSMRKQFFNLLKEASL 899
Score = 53 (23.7 bits), Expect = 8.4e-16, Sum P(3) = 8.4e-16
Identities = 11/37 (29%), Positives = 23/37 (62%)
Query: 2 TEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILM 38
T G+L+ D S++ + +++D++HER + D L+
Sbjct: 400 TTGVLLRRLLVDRSLKGVTHVVVDEIHERGMNEDFLL 436
>UNIPROTKB|F1N1A2 [details] [associations]
symbol:DHX57 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000571 InterPro:IPR001650
InterPro:IPR006575 InterPro:IPR007502 InterPro:IPR009060
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00642
Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103 PROSITE:PS51194
SMART:SM00356 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 InterPro:IPR015940 PROSITE:PS50030
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 SUPFAM:SSF46934
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 OMA:RAYKGWQ EMBL:DAAA02030601
EMBL:DAAA02030599 EMBL:DAAA02030600 IPI:IPI00709831
Ensembl:ENSBTAT00000019540 ArrayExpress:F1N1A2 Uniprot:F1N1A2
Length = 1382
Score = 177 (67.4 bits), Expect = 1.2e-10, Sum P(3) = 1.2e-10
Identities = 39/91 (42%), Positives = 59/91 (64%)
Query: 604 TEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTKIKYMTEGILMREMMTDP 663
T+PRRIS S+A RV++E +G TVGY IR + + T++ Y T G+L+R + D
Sbjct: 592 TQPRRISAISVAERVAKERAERVGLTVGYQIRLESVKSS-ATRLLYCTTGVLLRRLEGDT 650
Query: 664 LLRKYSVIMLDEVHERTIFTDILMGLLKKIL 694
L+ + I++DEVHERT +D L+ +LK I+
Sbjct: 651 ALQGVTHIIVDEVHERTEESDFLLLVLKDIV 681
Score = 174 (66.3 bits), Expect = 8.8e-16, Sum P(5) = 8.8e-16
Identities = 49/159 (30%), Positives = 80/159 (50%)
Query: 419 GDILAFVIGLEQIEHIIGILKQ---YHNQREDLKLLILPMHGSLPNNEQIKVFRPTPRAM 475
G IL F+ GL +I+ + L+ ++N+R + + +I P+H SL + EQ VF P +
Sbjct: 843 GAILVFLPGLAEIKMLYEQLQSNSLFNNRRSN-RCVIHPLHSSLSSEEQQAVFVKPPMGV 901
Query: 476 RKIVIATNIAETSITIPGIVYVIDPGFVKARWFNPNTLTNSLVVVPISKXXXXXXXXXXX 535
KI+I+TNIAETSITI +VYVID G +K + ++ + SL +S+
Sbjct: 902 TKIIISTNIAETSITIDDVVYVIDSGKMKEKRYDASKGMESLEDTFVSQANALQRKGRAG 961
Query: 536 XXXXXHVYRKNFMYNRLFIHFCVSRNIPTIPNDPKDVKC 574
+ + + F H + + +P I P + C
Sbjct: 962 RVASGVCF--HLFTSHHFNHQLLKQQLPEIQRVPLEQLC 998
Score = 100 (40.3 bits), Expect = 6.4e-05, Sum P(4) = 6.4e-05
Identities = 39/114 (34%), Positives = 60/114 (52%)
Query: 47 LYTEASFS-QLNECTPPEMQRTELSSAVLQLKALGI---HNILR-FS-FPSPPPAQNLRV 100
L+T F+ QL + PE+QR L L++K L + HN+ F+ PP A +LR
Sbjct: 971 LFTSHHFNHQLLKQQLPEIQRVPLEQLCLRIKILEMFSTHNLQSVFARLIEPPHADSLRA 1030
Query: 101 ALELLYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLLSSGSV---LDSAVEI 151
+ L LGA+ + LT P+G +A +P+ K++L GS+ LD A+ I
Sbjct: 1031 SKIRLRDLGALTPDETLT-PLGYHLASLPVDVRIGKLMLF-GSIFRCLDPALTI 1082
Score = 74 (31.1 bits), Expect = 8.8e-16, Sum P(5) = 8.8e-16
Identities = 17/59 (28%), Positives = 34/59 (57%)
Query: 346 LKRTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYYSNDP--VVNYV 402
L+R L++I+ SAT++AE +++N + ++++ G +PV ++ D V YV
Sbjct: 682 LQRPTLQVILMSATLNAELFSEYFN-----SCPVITIPGRTFPVDQFFLEDAIAVTRYV 735
Score = 74 (31.1 bits), Expect = 8.8e-16, Sum P(5) = 8.8e-16
Identities = 25/95 (26%), Positives = 40/95 (42%)
Query: 701 FECSDEIASILSLLQVQDIFIKPSSGALSLKARVLRRNFEVEQGDLLTLLNIFKFYE--K 758
F C D +I + L + F+ P + L F D L LL +K ++
Sbjct: 1073 FRCLDPALTIAASLAFKSPFVSPWDKKEEANQKKLE--FAFANSDYLALLRAYKGWQLSM 1130
Query: 759 QENKK---QFCHKYFFNYKVLKRAAELKNQMILLL 790
+E + +C + F + +VL+ A LK Q LL
Sbjct: 1131 KEGMRASYNYCRQNFLSGRVLQEMASLKRQFTELL 1165
Score = 66 (28.3 bits), Expect = 8.8e-16, Sum P(5) = 8.8e-16
Identities = 13/37 (35%), Positives = 25/37 (67%)
Query: 2 TEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILM 38
T G+L+ + D +++ + I++D+VHERT +D L+
Sbjct: 638 TTGVLLRRLEGDTALQGVTHIIVDEVHERTEESDFLL 674
Score = 41 (19.5 bits), Expect = 2.5e-07, Sum P(3) = 2.5e-07
Identities = 12/53 (22%), Positives = 27/53 (50%)
Query: 709 SILSLLQVQDIFIKPSSGA--LSLKARVLRRNFEVEQGDLLTLLNIFKFYEKQ 759
S LS + Q +F+KP G + + + + ++ D++ +++ K EK+
Sbjct: 883 SSLSSEEQQAVFVKPPMGVTKIIISTNIAETSITID--DVVYVIDSGKMKEKR 933
Score = 39 (18.8 bits), Expect = 8.8e-16, Sum P(5) = 8.8e-16
Identities = 7/13 (53%), Positives = 11/13 (84%)
Query: 837 LYIHPSSVLYTLQ 849
++IHPSSV Y ++
Sbjct: 1258 VHIHPSSVNYQVR 1270
Score = 38 (18.4 bits), Expect = 1.9e-12, Sum P(4) = 1.9e-12
Identities = 12/40 (30%), Positives = 21/40 (52%)
Query: 772 NYKVLKRAAELKNQMILLL----KKSSIPLVTSPRNTNAV 807
+++V + EL+ ++ LL K SI L T PR + +
Sbjct: 1333 SHQVAELVKELRCELDQLLQDKIKNPSIDLCTCPRGSRII 1372
>UNIPROTKB|Q5R607 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9601 "Pongo abelii" [GO:0003682 "chromatin binding"
evidence=ISS] [GO:0042645 "mitochondrial nucleoid" evidence=ISS]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003682 GO:GO:0003723
GO:GO:0042645 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 CTD:22907
HOVERGEN:HBG081437 KO:K13185 EMBL:CR858337 EMBL:CR860693
RefSeq:NP_001125306.1 UniGene:Pab.19257 ProteinModelPortal:Q5R607
SMR:Q5R607 PRIDE:Q5R607 GeneID:100172205 KEGG:pon:100172205
InParanoid:Q5R607 Uniprot:Q5R607
Length = 1194
Score = 185 (70.2 bits), Expect = 8.9e-16, Sum P(3) = 8.9e-16
Identities = 62/229 (27%), Positives = 102/229 (44%)
Query: 405 VVDTAIKIHESMPVGDILAFVIGLEQIEHIIGILKQYHNQREDLKLLILPMHGSLPNNEQ 464
V D + I G IL F+ G ++I+ + L++ E K LILP+H ++P +Q
Sbjct: 655 VTDLVLHIDARGEPGGILCFLPGWQEIKGVQQRLQEALGMHES-KYLILPVHSNIPMMDQ 713
Query: 465 IKVFRPTPRAMRKIVIATNIAETSITIPGIVYVIDPGFVKARWFNPNTLTNSLVVVPISK 524
+F+ P +RKIV+ATNIAETS TI IV+V+D G K ++ T + L V +S+
Sbjct: 714 KAIFQQPPVGVRKIVLATNIAETSTTINDIVHVVDSGLHKEERYDLKTKVSCLETVWVSR 773
Query: 525 XXXXXXXXXXXXXXXXHVYRKNFMYNRLFIHFCVSRNIPTIPNDP-KDVKCDVMFHKVFF 583
Y ++ R + V +P I P +++ H
Sbjct: 774 ANVIQRRGRAGRCQSGFAYH---LFPRSRLEKMVPFQVPEILRTPLENLVLQAKIHMPEK 830
Query: 584 SFFQYLLEAGWCYDTKLIGITEPRRISVTSLANRVSEELRTTLGHTVGY 632
+ ++L +A D+ I + I + + E TTLG + +
Sbjct: 831 TAVEFLSKA---VDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLAH 876
Score = 176 (67.0 bits), Expect = 4.8e-08, Sum P(2) = 4.8e-08
Identities = 38/89 (42%), Positives = 56/89 (62%)
Query: 603 ITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTKIKYMTEGILMREMMTD 662
IT+PRRIS S+A RVS EL +L VG+ +R + + + T GIL+R++ ++
Sbjct: 488 ITQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCTVGILLRKLQSN 547
Query: 663 PLLRKYSVIMLDEVHERTIFTDILMGLLK 691
P L S +++DEVHER + TD L+ LLK
Sbjct: 548 PSLEGVSHVIVDEVHERDVNTDFLLILLK 576
Score = 83 (34.3 bits), Expect = 8.9e-16, Sum P(3) = 8.9e-16
Identities = 18/46 (39%), Positives = 28/46 (60%)
Query: 2 TEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILMECSRKFSRL 47
T GIL+ +PS+E S +++D+VHER + TD L+ + RL
Sbjct: 536 TVGILLRKLQSNPSLEGVSHVIVDEVHERDVNTDFLLILLKGLQRL 581
Score = 70 (29.7 bits), Expect = 8.9e-16, Sum P(3) = 8.9e-16
Identities = 18/56 (32%), Positives = 29/56 (51%)
Query: 343 LKPLKRTQ--LKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYYSND 396
LK L+R L+L++ SAT D E +++ ++ V G +YPV +Y D
Sbjct: 575 LKGLQRLNPALRLVLMSATGDNERFSRYFG-----GCPVIKVPGFMYPVKEHYLED 625
Score = 40 (19.1 bits), Expect = 5.4e-09, Sum P(2) = 5.4e-09
Identities = 10/40 (25%), Positives = 20/40 (50%)
Query: 345 PLKRTQLKLIISSATVD--AEEICQFYNISASSNATILSV 382
PL + L +I AT A+ + QF+ + + + L++
Sbjct: 243 PLPKNLLAKVIQIATSSSTAKNLMQFHTVGTKTKLSTLTL 282
>UNIPROTKB|Q5R874 [details] [associations]
symbol:DHX9 "ATP-dependent RNA helicase A" species:9601
"Pongo abelii" [GO:0030529 "ribonucleoprotein complex"
evidence=ISS] [GO:0070937 "CRD-mediated mRNA stability complex"
evidence=ISS] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00358 SMART:SM00490
SMART:SM00847 InterPro:IPR014720 GO:GO:0005524 GO:GO:0005813
GO:GO:0034605 GO:GO:0005730 GO:GO:0003677 Gene3D:3.30.160.20
GO:GO:0030529 GO:GO:0003725 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 CTD:1660 HOVERGEN:HBG039429 KO:K13184
OrthoDB:EOG4HHP1J GO:GO:0070937 OMA:DDWIRLQ GO:GO:0070934
EMBL:CR859880 RefSeq:XP_002809755.1 UniGene:Pab.8432
ProteinModelPortal:Q5R874 SMR:Q5R874 PRIDE:Q5R874
Ensembl:ENSPPYT00000000510 GeneID:100449914 KEGG:pon:100449914
InParanoid:Q5R874 Uniprot:Q5R874
Length = 1269
Score = 167 (63.8 bits), Expect = 1.1e-15, Sum P(4) = 1.1e-15
Identities = 43/117 (36%), Positives = 65/117 (55%)
Query: 405 VVDTAIKIHESMPV-GDILAFVIGLEQIEHIIGILKQYHNQREDLKLLILPMHGSLPNNE 463
+++ +K E++ V G +L F+ G I + L+ + + ILP+H +P E
Sbjct: 636 LIEALLKYIETLNVPGAVLVFLPGWNLIYTMQKHLEMNPHFGSH-RYQILPLHSQIPREE 694
Query: 464 QIKVFRPTPRAMRKIVIATNIAETSITIPGIVYVIDPGFVKARWFNP-NTLTNSLVV 519
Q KVF P P + K++++TNIAETSITI +VYVID K + F N +TN V
Sbjct: 695 QRKVFDPVPVGVTKVILSTNIAETSITINDVVYVIDSCKQKVKLFTAHNNMTNYATV 751
Score = 160 (61.4 bits), Expect = 2.2e-10, Sum P(3) = 2.2e-10
Identities = 34/95 (35%), Positives = 58/95 (61%)
Query: 601 IGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTKIKYMTEGILMREMM 660
I +T+PRRIS S+A RV+ E G + GY++RF+ I + T G+L+R++
Sbjct: 440 IVVTQPRRISAVSVAERVAFERGEEPGKSCGYSVRFESILPRPHASIMFCTVGVLLRKLE 499
Query: 661 TDPLLRKYSVIMLDEVHERTIFTDILMGLLKKILK 695
+R S +++DE+HER I TD L+ +L+ +++
Sbjct: 500 AG--IRGISHVIVDEIHERDINTDFLLVVLRDVVQ 532
Score = 120 (47.3 bits), Expect = 2.0e-07, Sum P(3) = 2.0e-07
Identities = 32/95 (33%), Positives = 48/95 (50%)
Query: 47 LYTEASFSQLNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPS--PPPAQNLRVALEL 104
L + A F +L PEM RT L L +K L + I +F + PPP + A
Sbjct: 776 LCSRARFERLETHMTPEMFRTPLHEIALSIKLLRLGGIGQFLAKAIEPPPLDAVIEAEHT 835
Query: 105 LYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLL 139
L L A+D N LT P+G +A++P+ P K+++
Sbjct: 836 LRELDALDANDELT-PLGRILAKLPIEPRFGKMMI 869
Score = 77 (32.2 bits), Expect = 1.1e-15, Sum P(4) = 1.1e-15
Identities = 14/47 (29%), Positives = 26/47 (55%)
Query: 350 QLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYYSND 396
++++++ SAT+D C+++ N I+ V G YPV Y+ D
Sbjct: 536 EVRIVLMSATIDTSMFCEYF-----FNCPIIEVYGRTYPVQEYFLED 577
Score = 76 (31.8 bits), Expect = 1.1e-15, Sum P(4) = 1.1e-15
Identities = 35/126 (27%), Positives = 53/126 (42%)
Query: 735 LRRNFEVEQ-GDLLTLLNIFKFYEK-----QENKKQFCHKYFFNYKVLKRAAELKNQMIL 788
+ RNF + D + LL++F+ ++ +E + +FC N L+ E K Q+
Sbjct: 903 IHRNFAGNRFSDHVALLSVFQAWDDARMGGEEAEIRFCEHKRLNMATLRMTWEAKVQLKE 962
Query: 789 LLKKSSIP---LVTS------P-RNTNAVLKCLTNGFFSNAAYLHYSGVYRTVRGNEDLY 838
+L S P L+T P N + V+ L G + N Y T G L
Sbjct: 963 ILINSGFPEDCLLTQVFTNTGPDNNLDVVISLLAFGVYPNVCYHKEKRKILTTEGRNAL- 1021
Query: 839 IHPSSV 844
IH SSV
Sbjct: 1022 IHKSSV 1027
Score = 63 (27.2 bits), Expect = 1.1e-15, Sum P(4) = 1.1e-15
Identities = 15/49 (30%), Positives = 26/49 (53%)
Query: 2 TEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILMECSRKFSRLYTE 50
T G+L+ + + S +++D++HER I TD L+ R + Y E
Sbjct: 490 TVGVLLRK--LEAGIRGISHVIVDEIHERDINTDFLLVVLRDVVQAYPE 536
Score = 51 (23.0 bits), Expect = 1.8e-14, Sum P(4) = 1.8e-14
Identities = 19/67 (28%), Positives = 32/67 (47%)
Query: 62 PEMQRTELSSAVLQLKALGIHNILRFSFPSPP-PAQNLRVAL-ELLYSLGAMDVNGNLTK 119
P+ R+ ++ + +K LG R + AQ+ ++L LY LG ++ LTK
Sbjct: 205 PDHNRSFIAEMTIYIKQLGRRIFAREHGSNKKLAAQSCALSLVRQLYHLGVVEAYSGLTK 264
Query: 120 PV-GETM 125
GET+
Sbjct: 265 KKEGETV 271
>UNIPROTKB|Q08211 [details] [associations]
symbol:DHX9 "ATP-dependent RNA helicase A" species:9606
"Homo sapiens" [GO:0003725 "double-stranded RNA binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0007623 "circadian rhythm"
evidence=IEA] [GO:0034605 "cellular response to heat" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005813
"centrosome" evidence=IDA] [GO:0070937 "CRD-mediated mRNA stability
complex" evidence=IDA] [GO:0070934 "CRD-mediated mRNA
stabilization" evidence=IMP] [GO:0030529 "ribonucleoprotein
complex" evidence=IDA] [GO:0003724 "RNA helicase activity"
evidence=TAS] [GO:0004003 "ATP-dependent DNA helicase activity"
evidence=TAS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=TAS] [GO:0005737 "cytoplasm" evidence=TAS] [GO:0000398
"mRNA splicing, via spliceosome" evidence=TAS] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0008380 "RNA splicing"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0001085 "RNA polymerase II transcription factor binding"
evidence=IPI] Reactome:REACT_71 InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00358 SMART:SM00490 SMART:SM00847 InterPro:IPR014720
GO:GO:0005524 GO:GO:0005813 GO:GO:0005654 GO:GO:0034605
GO:GO:0005730 GO:GO:0003677 Reactome:REACT_1675 Gene3D:3.30.160.20
EMBL:CH471067 GO:GO:0030529 GO:GO:0003725 GO:GO:0004003
GO:GO:0000398 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000247063 CTD:1660 HOVERGEN:HBG039429 KO:K13184
OrthoDB:EOG4HHP1J GO:GO:0070937 OMA:DDWIRLQ EMBL:L13848 EMBL:U03643
EMBL:Y10658 EMBL:AB451248 EMBL:AB451372 EMBL:AL355999 EMBL:AL662837
EMBL:BC025245 EMBL:BC058896 EMBL:BC107881 EMBL:BC137136
IPI:IPI00844578 RefSeq:NP_001348.2 UniGene:Hs.191518 PDB:3LLM
PDBsum:3LLM ProteinModelPortal:Q08211 SMR:Q08211 DIP:DIP-31504N
IntAct:Q08211 MINT:MINT-5000572 STRING:Q08211 PhosphoSite:Q08211
DMDM:116241330 SWISS-2DPAGE:Q08211 PaxDb:Q08211 PRIDE:Q08211
Ensembl:ENST00000367549 GeneID:1660 KEGG:hsa:1660 UCSC:uc001gpr.3
GeneCards:GC01P182808 H-InvDB:HIX0001404 H-InvDB:HIX0149309
HGNC:HGNC:2750 HPA:CAB011819 HPA:HPA028050 MIM:603115
neXtProt:NX_Q08211 PharmGKB:PA27232 InParanoid:Q08211
GenomeRNAi:1660 NextBio:6832 PMAP-CutDB:Q08211 ArrayExpress:Q08211
Bgee:Q08211 CleanEx:HS_DHX9 Genevestigator:Q08211
GermOnline:ENSG00000135829 GO:GO:0070934 Uniprot:Q08211
Length = 1270
Score = 167 (63.8 bits), Expect = 1.1e-15, Sum P(4) = 1.1e-15
Identities = 43/117 (36%), Positives = 65/117 (55%)
Query: 405 VVDTAIKIHESMPV-GDILAFVIGLEQIEHIIGILKQYHNQREDLKLLILPMHGSLPNNE 463
+++ +K E++ V G +L F+ G I + L+ + + ILP+H +P E
Sbjct: 636 LIEALLKYIETLNVPGAVLVFLPGWNLIYTMQKHLEMNPHFGSH-RYQILPLHSQIPREE 694
Query: 464 QIKVFRPTPRAMRKIVIATNIAETSITIPGIVYVIDPGFVKARWFNP-NTLTNSLVV 519
Q KVF P P + K++++TNIAETSITI +VYVID K + F N +TN V
Sbjct: 695 QRKVFDPVPVGVTKVILSTNIAETSITINDVVYVIDSCKQKVKLFTAHNNMTNYATV 751
Score = 160 (61.4 bits), Expect = 2.2e-10, Sum P(3) = 2.2e-10
Identities = 34/95 (35%), Positives = 58/95 (61%)
Query: 601 IGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTKIKYMTEGILMREMM 660
I +T+PRRIS S+A RV+ E G + GY++RF+ I + T G+L+R++
Sbjct: 440 IVVTQPRRISAVSVAERVAFERGEEPGKSCGYSVRFESILPRPHASIMFCTVGVLLRKLE 499
Query: 661 TDPLLRKYSVIMLDEVHERTIFTDILMGLLKKILK 695
+R S +++DE+HER I TD L+ +L+ +++
Sbjct: 500 AG--IRGISHVIVDEIHERDINTDFLLVVLRDVVQ 532
Score = 120 (47.3 bits), Expect = 2.1e-07, Sum P(3) = 2.1e-07
Identities = 32/95 (33%), Positives = 48/95 (50%)
Query: 47 LYTEASFSQLNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPS--PPPAQNLRVALEL 104
L + A F +L PEM RT L L +K L + I +F + PPP + A
Sbjct: 776 LCSRARFERLETHMTPEMFRTPLHEIALSIKLLRLGGIGQFLAKAIEPPPLDAVIEAEHT 835
Query: 105 LYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLL 139
L L A+D N LT P+G +A++P+ P K+++
Sbjct: 836 LRELDALDANDELT-PLGRILAKLPIEPRFGKMMI 869
Score = 77 (32.2 bits), Expect = 1.1e-15, Sum P(4) = 1.1e-15
Identities = 14/47 (29%), Positives = 26/47 (55%)
Query: 350 QLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYYSND 396
++++++ SAT+D C+++ N I+ V G YPV Y+ D
Sbjct: 536 EVRIVLMSATIDTSMFCEYF-----FNCPIIEVYGRTYPVQEYFLED 577
Score = 76 (31.8 bits), Expect = 1.1e-15, Sum P(4) = 1.1e-15
Identities = 35/126 (27%), Positives = 53/126 (42%)
Query: 735 LRRNFEVEQ-GDLLTLLNIFKFYEK-----QENKKQFCHKYFFNYKVLKRAAELKNQMIL 788
+ RNF + D + LL++F+ ++ +E + +FC N L+ E K Q+
Sbjct: 903 IHRNFAGNRFSDHVALLSVFQAWDDARMGGEEAEIRFCEHKRLNMATLRMTWEAKVQLKE 962
Query: 789 LLKKSSIP---LVTS------P-RNTNAVLKCLTNGFFSNAAYLHYSGVYRTVRGNEDLY 838
+L S P L+T P N + V+ L G + N Y T G L
Sbjct: 963 ILINSGFPEDCLLTQVFTNTGPDNNLDVVISLLAFGVYPNVCYHKEKRKILTTEGRNAL- 1021
Query: 839 IHPSSV 844
IH SSV
Sbjct: 1022 IHKSSV 1027
Score = 63 (27.2 bits), Expect = 1.1e-15, Sum P(4) = 1.1e-15
Identities = 15/49 (30%), Positives = 26/49 (53%)
Query: 2 TEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILMECSRKFSRLYTE 50
T G+L+ + + S +++D++HER I TD L+ R + Y E
Sbjct: 490 TVGVLLRK--LEAGIRGISHVIVDEIHERDINTDFLLVVLRDVVQAYPE 536
Score = 51 (23.0 bits), Expect = 1.8e-14, Sum P(4) = 1.8e-14
Identities = 19/67 (28%), Positives = 32/67 (47%)
Query: 62 PEMQRTELSSAVLQLKALGIHNILRFSFPSPP-PAQNLRVAL-ELLYSLGAMDVNGNLTK 119
P+ R+ ++ + +K LG R + AQ+ ++L LY LG ++ LTK
Sbjct: 205 PDHNRSFIAEMTIYIKQLGRRIFAREHGSNKKLAAQSCALSLVRQLYHLGVVEAYSGLTK 264
Query: 120 PV-GETM 125
GET+
Sbjct: 265 KKEGETV 271
>UNIPROTKB|F5GZS0 [details] [associations]
symbol:DHX36 "Probable ATP-dependent RNA helicase DHX36"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0003676
EMBL:AC018452 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:AC134026
HGNC:HGNC:14410 IPI:IPI00922725 ProteinModelPortal:F5GZS0
SMR:F5GZS0 PRIDE:F5GZS0 Ensembl:ENST00000544526 ArrayExpress:F5GZS0
Bgee:F5GZS0 Uniprot:F5GZS0
Length = 994
Score = 169 (64.5 bits), Expect = 1.3e-11, Sum P(2) = 1.3e-11
Identities = 37/93 (39%), Positives = 56/93 (60%)
Query: 604 TEPRRISVTSLANRVSEELRTTLG--HTVGYTIRFDDCTTEDVTKIKYMTEGILMREMMT 661
T+PRRIS S+A RV+ E + G ++ GY IR I Y T GI+++ + +
Sbjct: 262 TQPRRISAISVAERVAAERAESCGSGNSTGYQIRLQSRLPRKQGSILYCTTGIILQWLQS 321
Query: 662 DPLLRKYSVIMLDEVHERTIFTDILMGLLKKIL 694
DP L S I+LDE+HER + +D+LM ++K +L
Sbjct: 322 DPYLSSVSHIVLDEIHERNLQSDVLMTVVKDLL 354
Score = 148 (57.2 bits), Expect = 1.2e-15, Sum P(4) = 1.2e-15
Identities = 39/109 (35%), Positives = 52/109 (47%)
Query: 466 KVFRPTPRAMRKIVIATNIAETSITIPGIVYVIDPGFVKARWFNPNTLTNSLVVVPISKX 525
+VF+ TP +RKIVIATNIAETSITI +VYVID G +K F+ +++ +SK
Sbjct: 521 QVFKRTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKA 580
Query: 526 XXXXXXXXXXXXXXXHVYRKNFMYNRLFIHFCVSRNIPTIPNDPKDVKC 574
H Y +YN L +P I P + C
Sbjct: 581 NAKQRKGRAGRVQPGHCYH---LYNGLRASLLDDYQLPEILRTPLEELC 626
Score = 105 (42.0 bits), Expect = 4.2e-08, Sum P(3) = 4.2e-08
Identities = 30/95 (31%), Positives = 47/95 (49%)
Query: 47 LYTEASFSQLNECTPPEMQRTELSSAVLQLKALGIHNILRF--SFPSPPPAQNLRVALEL 104
LY S L++ PE+ RT L LQ+K L + I F PP + + +++
Sbjct: 600 LYNGLRASLLDDYQLPEILRTPLEELCLQIKILRLGGIAYFLSRLMDPPSNEAVLLSIRH 659
Query: 105 LYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLL 139
L L A+D LT P+G +A +P+ P K++L
Sbjct: 660 LMELNALDKQEELT-PLGVHLARLPVEPHIGKMIL 693
Score = 80 (33.2 bits), Expect = 1.2e-15, Sum P(4) = 1.2e-15
Identities = 24/91 (26%), Positives = 43/91 (47%)
Query: 701 FECSDEIASILSLLQVQDIFIKPSSGALSLKARVLRRNFEVE-QGDLLTLLNIFKFYEKQ 759
F C D + +I + L +D F+ P AR R+ + + D LT++N F+ +E+
Sbjct: 698 FCCLDPVLTIAASLSFKDPFVIPLGKEKIADAR--RKELAKDTRSDHLTVVNAFEGWEEA 755
Query: 760 ENK-----KQFCHKYFFNYKVLKRAAELKNQ 785
+ K +C +YF + L+ +K Q
Sbjct: 756 RRRGFRYEKDYCWEYFLSSNTLQMLHNMKGQ 786
Score = 78 (32.5 bits), Expect = 1.2e-15, Sum P(4) = 1.2e-15
Identities = 15/37 (40%), Positives = 25/37 (67%)
Query: 2 TEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILM 38
T GI+++ DP + S I+LD++HER + +D+LM
Sbjct: 311 TTGIILQWLQSDPYLSSVSHIVLDEIHERNLQSDVLM 347
Score = 73 (30.8 bits), Expect = 1.2e-15, Sum P(4) = 1.2e-15
Identities = 17/57 (29%), Positives = 32/57 (56%)
Query: 348 RTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYYSNDPV--VNYV 402
R+ LK+I+ SAT++AE+ +++ N ++ + G +PV Y D + + YV
Sbjct: 357 RSDLKVILMSATLNAEKFSEYFG-----NCPMIHIPGFTFPVVEYLLEDVIEKIRYV 408
Score = 38 (18.4 bits), Expect = 1.3e-08, Sum P(3) = 1.3e-08
Identities = 7/24 (29%), Positives = 16/24 (66%)
Query: 430 QIEHIIGILKQYHNQREDLKLLIL 453
Q + ++ ++K N R DLK++++
Sbjct: 342 QSDVLMTVVKDLLNFRSDLKVILM 365
>RGD|1308548 [details] [associations]
symbol:Dhx9 "DEAH (Asp-Glu-Ala-His) box polypeptide 9"
species:10116 "Rattus norvegicus" [GO:0001085 "RNA polymerase II
transcription factor binding" evidence=IEA;ISO] [GO:0003725
"double-stranded RNA binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0005813 "centrosome"
evidence=IEA;ISO] [GO:0007623 "circadian rhythm" evidence=IEA;ISO]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA;ISO]
[GO:0034605 "cellular response to heat" evidence=IEA;ISO]
[GO:0070934 "CRD-mediated mRNA stabilization" evidence=IEA;ISO]
[GO:0070937 "CRD-mediated mRNA stability complex" evidence=IEA;ISO]
InterPro:IPR001159 InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137
PROSITE:PS51194 SMART:SM00358 SMART:SM00490 SMART:SM00847
InterPro:IPR014720 RGD:1308548 GO:GO:0005524 Gene3D:3.30.160.20
GO:GO:0005622 GO:GO:0003725 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 CTD:1660 KO:K13184 OrthoDB:EOG4HHP1J
EMBL:CH473958 IPI:IPI00947663 RefSeq:NP_001100654.1
UniGene:Rn.107359 Ensembl:ENSRNOT00000064860 GeneID:304859
KEGG:rno:304859 UCSC:RGD:1308548 NextBio:653729 Uniprot:D4A9D6
Length = 1174
Score = 171 (65.3 bits), Expect = 1.2e-15, Sum P(4) = 1.2e-15
Identities = 43/117 (36%), Positives = 66/117 (56%)
Query: 405 VVDTAIKIHESMPV-GDILAFVIGLEQIEHIIGILKQYHNQREDLKLLILPMHGSLPNNE 463
+++ +K E++ V G +L F+ G I + L+ ++ + ILP+H +P E
Sbjct: 639 LIEALLKYIETLNVPGAVLVFLPGWNLIYTMQKHLEN-NSHFGSHRYQILPLHSQIPREE 697
Query: 464 QIKVFRPTPRAMRKIVIATNIAETSITIPGIVYVIDPGFVKARWFNP-NTLTNSLVV 519
Q KVF P P + K++++TNIAETSITI +VYVID K + F N +TN V
Sbjct: 698 QRKVFDPVPDGVTKVILSTNIAETSITINDVVYVIDSCKQKVKLFTAHNNMTNYATV 754
Score = 157 (60.3 bits), Expect = 6.8e-10, Sum P(3) = 6.8e-10
Identities = 33/94 (35%), Positives = 57/94 (60%)
Query: 601 IGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTKIKYMTEGILMREMM 660
I +T+PRRIS ++A RV+ E G + GY++RF+ I + T G+L+R++
Sbjct: 443 IVVTQPRRISAVAVAERVAYERGEEPGKSCGYSVRFESILPRPHASIMFCTVGVLLRKLE 502
Query: 661 TDPLLRKYSVIMLDEVHERTIFTDILMGLLKKIL 694
+R S +++DE+HER I TD L+ +L+ ++
Sbjct: 503 AG--IRGISHVIVDEIHERDINTDFLLVVLRDVV 534
Score = 120 (47.3 bits), Expect = 2.0e-07, Sum P(3) = 2.0e-07
Identities = 32/95 (33%), Positives = 48/95 (50%)
Query: 47 LYTEASFSQLNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPS--PPPAQNLRVALEL 104
L + A F +L PEM RT L L +K L + I +F + PPP + A
Sbjct: 779 LCSRARFDRLETHMTPEMFRTPLHEIALSIKLLRLGGIGQFLAKAIEPPPLDAVIEAEHT 838
Query: 105 LYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLL 139
L L A+D N LT P+G +A++P+ P K+++
Sbjct: 839 LRELDALDANDELT-PLGRILAKLPIEPRFGKMMI 872
Score = 78 (32.5 bits), Expect = 1.2e-15, Sum P(4) = 1.2e-15
Identities = 35/126 (27%), Positives = 54/126 (42%)
Query: 735 LRRNFEVEQ-GDLLTLLNIFKFYEK-----QENKKQFCHKYFFNYKVLKRAAELKNQMIL 788
+ RNF + D + LL++F+ ++ +E + +FC + N L+ E K Q+
Sbjct: 906 IHRNFAGNRFSDHVALLSVFQAWDDARMSGEEAEIRFCEQKRLNMATLRMTWEAKVQLKE 965
Query: 789 LLKKSSIP---LVTS------P-RNTNAVLKCLTNGFFSNAAYLHYSGVYRTVRGNEDLY 838
+L S P L+T P N + V+ L G + N Y T G L
Sbjct: 966 ILINSGFPEDCLLTQVFTNTGPDNNLDVVISLLAFGVYPNVCYHKEKRKILTTEGRNAL- 1024
Query: 839 IHPSSV 844
IH SSV
Sbjct: 1025 IHKSSV 1030
Score = 72 (30.4 bits), Expect = 1.2e-15, Sum P(4) = 1.2e-15
Identities = 13/47 (27%), Positives = 26/47 (55%)
Query: 350 QLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYYSND 396
++++++ SAT+D C+++ N I+ V G +PV Y+ D
Sbjct: 539 EVRIVLMSATIDTTMFCEYF-----FNCPIIEVYGRTFPVQEYFLED 580
Score = 60 (26.2 bits), Expect = 1.2e-15, Sum P(4) = 1.2e-15
Identities = 15/49 (30%), Positives = 25/49 (51%)
Query: 2 TEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILMECSRKFSRLYTE 50
T G+L+ + + S +++D++HER I TD L+ R Y E
Sbjct: 493 TVGVLLRK--LEAGIRGISHVIVDEIHERDINTDFLLVVLRDVVLAYPE 539
Score = 46 (21.3 bits), Expect = 3.0e-14, Sum P(4) = 3.0e-14
Identities = 16/60 (26%), Positives = 28/60 (46%)
Query: 62 PEMQRTELSSAVLQLKALGIHNILRFSFPSPP-PAQNLRVAL-ELLYSLGAMDVNGNLTK 119
P+ R+ ++ + +K LG R + AQ+ ++L LY LG ++ LTK
Sbjct: 208 PDHNRSFIAEMTIYIKQLGRRIFAREHGSNKKLAAQSCALSLVRQLYHLGVIEAYSGLTK 267
>UNIPROTKB|H7C109 [details] [associations]
symbol:DHX57 "Putative ATP-dependent RNA helicase DHX57"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
GO:GO:0004386 EMBL:AC018693 InterPro:IPR011709 Pfam:PF07717
HGNC:HGNC:20086 ChiTaRS:DHX57 Ensembl:ENST00000452978
Uniprot:H7C109
Length = 665
Score = 184 (69.8 bits), Expect = 2.2e-15, Sum P(3) = 2.2e-15
Identities = 53/179 (29%), Positives = 90/179 (50%)
Query: 402 VQGVVDTAIKIHESMPVGDILAFVIGLEQIEHIIGILKQ---YHNQREDLKLLILPMHGS 458
++ +++ + S P G IL F+ GL +I+ + L+ ++N+R + + +I P+H S
Sbjct: 155 IEALLEWIVDGKHSYPPGAILVFLPGLAEIKMLYEQLQSNSLFNNRRSN-RCVIHPLHSS 213
Query: 459 LPNNEQIKVFRPTPRAMRKIVIATNIAETSITIPGIVYVIDPGFVKARWFNPNTLTNSLV 518
L + EQ VF P + KI+I+TNIAETSITI +VYVID G +K + ++ + SL
Sbjct: 214 LSSEEQQAVFVKPPAGVTKIIISTNIAETSITIDDVVYVIDSGKMKEKRYDASKGMESLE 273
Query: 519 VVPISKXXXXXXXXXXXXXXXX---HVYRKNFMYNRLFIHFCVSRNIPTIPNDPKDVKC 574
+S+ H++ + YN H + + +P I P + C
Sbjct: 274 DTFVSQANALQRKGRAGRVASGVCFHLFTSHH-YN----HQLLKQQLPEIQRVPLEQLC 327
Score = 73 (30.8 bits), Expect = 2.2e-15, Sum P(3) = 2.2e-15
Identities = 25/95 (26%), Positives = 40/95 (42%)
Query: 701 FECSDEIASILSLLQVQDIFIKPSSGALSLKARVLRRNFEVEQGDLLTLLNIFKFYE--K 758
F C D +I + L + F+ P + L F D L LL +K ++
Sbjct: 402 FRCLDPALTIAASLAFKSPFVSPWDKKEEANQKKLE--FAFANSDYLALLQAYKGWQLST 459
Query: 759 QENKK---QFCHKYFFNYKVLKRAAELKNQMILLL 790
+E + +C + F + +VL+ A LK Q LL
Sbjct: 460 KEGVRASYNYCRQNFLSGRVLQEMASLKRQFTELL 494
Score = 67 (28.6 bits), Expect = 2.2e-15, Sum P(3) = 2.2e-15
Identities = 16/58 (27%), Positives = 32/58 (55%)
Query: 347 KRTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYYSNDP--VVNYV 402
+R L++I+ SAT++AE ++N + ++++ G +PV ++ D V YV
Sbjct: 14 QRPGLQVILMSATLNAELFSDYFN-----SCPVITIPGRTFPVDQFFLEDAIAVTRYV 66
Score = 38 (18.4 bits), Expect = 8.1e-12, Sum P(3) = 8.1e-12
Identities = 12/40 (30%), Positives = 21/40 (52%)
Query: 772 NYKVLKRAAELKNQMILLL----KKSSIPLVTSPRNTNAV 807
+++V + EL+ ++ LL K SI L T PR + +
Sbjct: 616 SHQVAELVKELRCELDQLLQDKIKNPSIDLCTCPRGSRII 655
>DICTYBASE|DDB_G0275313 [details] [associations]
symbol:dhx9 "ATP-dependent RNA helicase"
species:44689 "Dictyostelium discoideum" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0004003
"ATP-dependent DNA helicase activity" evidence=ISS] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00358 SMART:SM00490
SMART:SM00847 dictyBase:DDB_G0275313 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GenomeReviews:CM000151_GR EMBL:AAFI02000013
GO:GO:0003725 GO:GO:0004003 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 RefSeq:XP_643861.1 ProteinModelPortal:Q869Z1
EnsemblProtists:DDB0233740 GeneID:8619912 KEGG:ddi:DDB_G0275313
InParanoid:Q869Z1 OMA:CEYLLEN Uniprot:Q869Z1
Length = 1472
Score = 202 (76.2 bits), Expect = 1.3e-14, Sum P(2) = 1.3e-14
Identities = 44/96 (45%), Positives = 60/96 (62%)
Query: 601 IGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTKIKYMTEGILMREMM 660
I +T+PRRISV A R++ E +G TVGY IRFD+ +K+ T GIL++ M
Sbjct: 769 IVMTQPRRISVLGAAERMAYERLEKVGDTVGYQIRFDNVQPLGTSKLLVCTPGILLKRMY 828
Query: 661 TDPLLRKYSVIMLDEVHERTIFTDILMGLLKKILKD 696
+D L S + +DEVHER I TD L+ +LKK+L D
Sbjct: 829 SDMKLHNVSHLFIDEVHERDIHTDFLLIILKKLLAD 864
Score = 186 (70.5 bits), Expect = 2.3e-15, Sum P(3) = 2.3e-15
Identities = 56/173 (32%), Positives = 88/173 (50%)
Query: 351 LKLIISSATVDAEEICQFYNISASSNATI---LSVKGHLYPVSVYYSNDPVVNY------ 401
L++I+ SAT+D + ++ T ++ + L +S NDP ++Y
Sbjct: 868 LRVILMSATMDNSLVSAYFGTCPVIKLTSYHHIAQEYFLEDISKQL-NDPTISYRDEQSD 926
Query: 402 -------VQGVVDTAIKIHESMPVGDILAFVIGLEQIEHIIGILKQYHNQREDLKLLILP 454
+Q +V K+ S IL F+ G E I +++++ R + + LILP
Sbjct: 927 DVDHEMILQLIVHIVTKV-SSTSEDSILIFLPGWEDISQTRELMRRHPMLRNENEFLILP 985
Query: 455 MHGSLPNNEQIKVFRPTPRAMRKIVIATNIAETSITIPGIVYVIDPGFVKARW 507
+H S+ Q KVF P +RKIV++TNIAETSITI +VYVID VK ++
Sbjct: 986 LHSSVSMQLQAKVFEKPPPKIRKIVLSTNIAETSITINDVVYVIDSAKVKLKY 1038
Score = 106 (42.4 bits), Expect = 5.9e-07, Sum P(3) = 5.9e-07
Identities = 27/89 (30%), Positives = 50/89 (56%)
Query: 53 FSQLNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPS--PPPAQNLRVALELLYSLGA 110
++ L E EM+R L LQ+K L + +++ F + PP +++ A+ LL LGA
Sbjct: 1083 YNTLEEFQLSEMRRMPLHELCLQVKVLVLGDVIGFLSEALEPPETKSIDNAINLLIDLGA 1142
Query: 111 MDVNGNLTKPVGETMAEMPLHPIHAKVLL 139
++ N LT P+G ++ +P+ P K+++
Sbjct: 1143 LNANQELT-PLGLQLSFIPVDPRIGKMII 1170
Score = 79 (32.9 bits), Expect = 2.3e-15, Sum P(3) = 2.3e-15
Identities = 30/124 (24%), Positives = 60/124 (48%)
Query: 743 QGDLLTLLNIFKFYEKQE---NKKQFCHKYFFNYKVLKRAAELKNQMILLLKKSSI---- 795
Q D L+ LNIF + + + Q+C F + +L++ ++K Q++ + I
Sbjct: 1236 QSDHLSFLNIFNGWLQSRMDGTEDQYCQD-FLSIPLLQQILKVKKQLLSTINDLGIINAQ 1294
Query: 796 ---PLVTSP---RNTNA--VLKCLT-NGFFSNAAYLHYSGVYRTVRGNEDLYIHPSSVLY 846
V + N+N +++ + +G F N A ++T+ +E+ ++HPSS++Y
Sbjct: 1295 LRDGFVNNSFFNENSNNLDIIRAIICSGLFPNIARQRKKREFKTL--SENTFLHPSSIVY 1352
Query: 847 TLQQ 850
L Q
Sbjct: 1353 NLFQ 1356
Score = 72 (30.4 bits), Expect = 2.3e-15, Sum P(3) = 2.3e-15
Identities = 16/42 (38%), Positives = 24/42 (57%)
Query: 2 TEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILMECSRK 43
T GIL++ D + S + +D+VHER I TD L+ +K
Sbjct: 819 TPGILLKRMYSDMKLHNVSHLFIDEVHERDIHTDFLLIILKK 860
>MGI|MGI:108177 [details] [associations]
symbol:Dhx9 "DEAH (Asp-Glu-Ala-His) box polypeptide 9"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0001085 "RNA polymerase II transcription factor
binding" evidence=ISO] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005813 "centrosome" evidence=ISO]
[GO:0007623 "circadian rhythm" evidence=IMP] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0030529 "ribonucleoprotein
complex" evidence=ISO] [GO:0034605 "cellular response to heat"
evidence=IDA] [GO:0070934 "CRD-mediated mRNA stabilization"
evidence=ISO] [GO:0070937 "CRD-mediated mRNA stability complex"
evidence=ISO] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00358 SMART:SM00490
SMART:SM00847 InterPro:IPR014720 MGI:MGI:108177 GO:GO:0005524
GO:GO:0034605 GO:GO:0005730 GO:GO:0003677 GO:GO:0007623
Gene3D:3.30.160.20 GO:GO:0030529 GO:GO:0003725 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000247063 CTD:1660
HOVERGEN:HBG039429 KO:K13184 OrthoDB:EOG4HHP1J GO:GO:0070937
EMBL:U91922 EMBL:AF023530 EMBL:AY512925 EMBL:BC089159 EMBL:AK013423
EMBL:U92080 IPI:IPI00339468 IPI:IPI00607914 IPI:IPI00875791
RefSeq:NP_031868.2 UniGene:Mm.20000 PDB:1UIL PDB:1WHQ PDB:2RS6
PDB:2RS7 PDBsum:1UIL PDBsum:1WHQ PDBsum:2RS6 PDBsum:2RS7
ProteinModelPortal:O70133 SMR:O70133 IntAct:O70133 STRING:O70133
PhosphoSite:O70133 PaxDb:O70133 PRIDE:O70133 GeneID:13211
KEGG:mmu:13211 UCSC:uc007czy.1 InParanoid:O70133 ChiTaRS:DHX9
EvolutionaryTrace:O70133 NextBio:283382 CleanEx:MM_DHX9
Genevestigator:O70133 GermOnline:ENSMUSG00000042699 Uniprot:O70133
Length = 1380
Score = 171 (65.3 bits), Expect = 2.5e-15, Sum P(4) = 2.5e-15
Identities = 43/117 (36%), Positives = 66/117 (56%)
Query: 405 VVDTAIKIHESMPV-GDILAFVIGLEQIEHIIGILKQYHNQREDLKLLILPMHGSLPNNE 463
+++ +K E++ V G +L F+ G I + L+ ++ + ILP+H +P E
Sbjct: 638 LIEALLKYIETLNVPGAVLVFLPGWNLIYTMQKHLEN-NSHFGSHRYQILPLHSQIPREE 696
Query: 464 QIKVFRPTPRAMRKIVIATNIAETSITIPGIVYVIDPGFVKARWFNP-NTLTNSLVV 519
Q KVF P P + K++++TNIAETSITI +VYVID K + F N +TN V
Sbjct: 697 QRKVFDPVPDGVTKVILSTNIAETSITINDVVYVIDSCKQKVKLFTAHNNMTNYATV 753
Score = 157 (60.3 bits), Expect = 1.2e-09, Sum P(3) = 1.2e-09
Identities = 33/94 (35%), Positives = 57/94 (60%)
Query: 601 IGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTKIKYMTEGILMREMM 660
I +T+PRRIS ++A RV+ E G + GY++RF+ I + T G+L+R++
Sbjct: 442 IVVTQPRRISAVAVAERVAYERGEEPGKSCGYSVRFESILPRPHASIMFCTVGVLLRKLE 501
Query: 661 TDPLLRKYSVIMLDEVHERTIFTDILMGLLKKIL 694
+R S +++DE+HER I TD L+ +L+ ++
Sbjct: 502 AG--IRGISHVIVDEIHERDINTDFLLVVLRDVV 533
Score = 121 (47.7 bits), Expect = 2.6e-07, Sum P(3) = 2.6e-07
Identities = 32/95 (33%), Positives = 48/95 (50%)
Query: 47 LYTEASFSQLNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPS--PPPAQNLRVALEL 104
L + A F +L PEM RT L L +K L + I +F + PPP + A
Sbjct: 778 LCSRARFDRLETHMTPEMFRTPLHEIALSIKLLRLGGIGQFLAKAIEPPPLDAIIEAEHT 837
Query: 105 LYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLL 139
L L A+D N LT P+G +A++P+ P K+++
Sbjct: 838 LRELDALDANDELT-PLGRILAKLPIEPRFGKMMI 871
Score = 78 (32.5 bits), Expect = 2.5e-15, Sum P(4) = 2.5e-15
Identities = 35/126 (27%), Positives = 54/126 (42%)
Query: 735 LRRNFEVEQ-GDLLTLLNIFKFYEK-----QENKKQFCHKYFFNYKVLKRAAELKNQMIL 788
+ RNF + D + LL++F+ ++ +E + +FC + N L+ E K Q+
Sbjct: 905 IHRNFAGNRFSDHVALLSVFQAWDDARMSGEEAEIRFCEQKRLNMATLRMTWEAKVQLKE 964
Query: 789 LLKKSSIP---LVTS------P-RNTNAVLKCLTNGFFSNAAYLHYSGVYRTVRGNEDLY 838
+L S P L+T P N + V+ L G + N Y T G L
Sbjct: 965 ILINSGFPEDCLLTQVFTNTGPDNNLDVVISLLAFGVYPNVCYHKEKRKILTTEGRNAL- 1023
Query: 839 IHPSSV 844
IH SSV
Sbjct: 1024 IHKSSV 1029
Score = 72 (30.4 bits), Expect = 2.5e-15, Sum P(4) = 2.5e-15
Identities = 13/47 (27%), Positives = 26/47 (55%)
Query: 350 QLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYYSND 396
++++++ SAT+D C+++ N I+ V G +PV Y+ D
Sbjct: 538 EVRIVLMSATIDTTMFCEYF-----FNCPIIEVYGRTFPVQEYFLED 579
Score = 60 (26.2 bits), Expect = 2.5e-15, Sum P(4) = 2.5e-15
Identities = 15/49 (30%), Positives = 25/49 (51%)
Query: 2 TEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILMECSRKFSRLYTE 50
T G+L+ + + S +++D++HER I TD L+ R Y E
Sbjct: 492 TVGVLLRK--LEAGIRGISHVIVDEIHERDINTDFLLVVLRDVVLAYPE 538
Score = 46 (21.3 bits), Expect = 6.3e-14, Sum P(4) = 6.3e-14
Identities = 16/60 (26%), Positives = 28/60 (46%)
Query: 62 PEMQRTELSSAVLQLKALGIHNILRFSFPSPP-PAQNLRVAL-ELLYSLGAMDVNGNLTK 119
P+ R+ ++ + +K LG R + AQ+ ++L LY LG ++ LTK
Sbjct: 207 PDHNRSFIAEMTIYIKQLGRRIFAREHGSNKKLAAQSCALSLVRQLYHLGVIEAYSGLTK 266
>UNIPROTKB|E1C9G0 [details] [associations]
symbol:DHX57 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR000571 InterPro:IPR001650
InterPro:IPR006575 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00642 Pfam:PF04408 Pfam:PF05773
PROSITE:PS50103 PROSITE:PS51194 SMART:SM00356 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008270 GO:GO:0003676
InterPro:IPR015940 SMART:SM00165 PROSITE:PS50030 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00550000074257 OMA:RAYKGWQ
EMBL:AADN02041257 EMBL:AADN02041258 EMBL:AADN02041259
EMBL:AADN02041260 IPI:IPI00679513 Ensembl:ENSGALT00000023376
Uniprot:E1C9G0
Length = 1380
Score = 198 (74.8 bits), Expect = 2.8e-15, Sum P(4) = 2.8e-15
Identities = 58/212 (27%), Positives = 100/212 (47%)
Query: 368 FYNISASSNATILSVKGHLYPVSVYYSNDPVVNYVQGVVDTAIKIHESMPVGDILAFVIG 427
F + S+ N T+L +SV + + ++ +++ + S P G +L F+ G
Sbjct: 796 FLSFSSGVNKTVLKT------MSVMDLDKVNLELIEALLEWIVDGKHSYPPGAVLIFLPG 849
Query: 428 LEQIEHIIGILKQ--YHNQREDLKLLILPMHGSLPNNEQIKVFRPTPRAMRKIVIATNIA 485
L +I+ + L+ N R + ++ P+H SL + EQ VF P + KI+I+TNIA
Sbjct: 850 LAEIKMLYEQLQSNALFNNRHSKRCVVYPLHSSLSSEEQQSVFLRPPAGVIKIIISTNIA 909
Query: 486 ETSITIPGIVYVIDPGFVKARWFNPNTLTNSLVVVPISKXXXXXXXXXXXXXXXX---HV 542
ETS+TI +VYVID G +K + ++P+ SL +S+ H+
Sbjct: 910 ETSVTIDDVVYVIDSGKMKEKRYDPSKGMESLEDTFVSRANALQRKGRAGRVASGVCFHL 969
Query: 543 YRKNFMYNRLFIHFCVSRNIPTIPNDPKDVKC 574
+ + YN H + + +P I P + C
Sbjct: 970 FSSHH-YN----HQLIKQQLPEIQRVPLEQLC 996
Score = 175 (66.7 bits), Expect = 7.3e-11, Sum P(4) = 7.3e-11
Identities = 38/91 (41%), Positives = 59/91 (64%)
Query: 604 TEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTKIKYMTEGILMREMMTDP 663
T+PRRIS S+A RV++E +G TVGY IR + + T++ Y T G+L+R + D
Sbjct: 592 TQPRRISAISVAERVAKERTERVGVTVGYQIRLESVKSS-ATRLLYCTTGVLLRRLEGDL 650
Query: 664 LLRKYSVIMLDEVHERTIFTDILMGLLKKIL 694
L+ + +++DEVHERT +D L+ +LK I+
Sbjct: 651 TLQGITHVIVDEVHERTEESDFLLLVLKDIM 681
Score = 91 (37.1 bits), Expect = 0.00033, Sum P(4) = 0.00033
Identities = 31/99 (31%), Positives = 51/99 (51%)
Query: 62 PEMQRTELSSAVLQLKAL------GIHNILRFSFPSPPPAQNLRVALELLYSLGAMDVNG 115
PE+QR L L++K L +H++L PP ++LR + L LGA+ +
Sbjct: 985 PEIQRVPLEQLCLRIKILEMFSAQSLHSVLS-RLIEPPRTESLRASKLRLQDLGALTADE 1043
Query: 116 NLTKPVGETMAEMPLHPIHAKVLLSSGSV---LDSAVEI 151
LT P+G +A +P+ K++L G++ LD A+ I
Sbjct: 1044 KLT-PLGYHLASLPVDVRIGKLMLF-GTIFRCLDPALTI 1080
Score = 79 (32.9 bits), Expect = 2.8e-15, Sum P(4) = 2.8e-15
Identities = 26/95 (27%), Positives = 40/95 (42%)
Query: 701 FECSDEIASILSLLQVQDIFIKPSSGALSLKARVLRRNFEVEQGDLLTLLNIFKFY---- 756
F C D +I + L + F+ P + L +F V D L LL +K +
Sbjct: 1071 FRCLDPALTIAASLAFKSPFVSPWDKREEANKKKL--DFAVGNSDYLALLQAYKGWRLST 1128
Query: 757 -EKQENKKQFCHKYFFNYKVLKRAAELKNQMILLL 790
E + +C + F + +VL+ A LK Q LL
Sbjct: 1129 KEGSQASYNYCRENFLSGRVLQEIASLKRQFTELL 1163
Score = 63 (27.2 bits), Expect = 2.8e-15, Sum P(4) = 2.8e-15
Identities = 12/37 (32%), Positives = 25/37 (67%)
Query: 2 TEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILM 38
T G+L+ + D +++ + +++D+VHERT +D L+
Sbjct: 638 TTGVLLRRLEGDLTLQGITHVIVDEVHERTEESDFLL 674
Score = 44 (20.5 bits), Expect = 2.0e-07, Sum P(4) = 2.0e-07
Identities = 12/51 (23%), Positives = 25/51 (49%)
Query: 709 SILSLLQVQDIFIKPSSGALSLKARVLRRNFEVEQGDLLTLLNIFKFYEKQ 759
S LS + Q +F++P +G + + V D++ +++ K EK+
Sbjct: 881 SSLSSEEQQSVFLRPPAGVIKIIISTNIAETSVTIDDVVYVIDSGKMKEKR 931
Score = 43 (20.2 bits), Expect = 2.8e-13, Sum P(4) = 2.8e-13
Identities = 7/13 (53%), Positives = 12/13 (92%)
Query: 357 SATVDAEEICQFY 369
+AT +++EIC+FY
Sbjct: 295 TATQNSKEICKFY 307
Score = 39 (18.8 bits), Expect = 2.8e-15, Sum P(4) = 2.8e-15
Identities = 8/20 (40%), Positives = 13/20 (65%)
Query: 837 LYIHPSSVLYTLQQPQCTHL 856
++IHPSSV Y + + +L
Sbjct: 1256 VHIHPSSVNYQTRHFESPYL 1275
>UNIPROTKB|F1M8G5 [details] [associations]
symbol:Dhx57 "Protein Dhx57" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR000571 InterPro:IPR001650
InterPro:IPR006575 InterPro:IPR007502 InterPro:IPR009060
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00642
Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103 PROSITE:PS51194
SMART:SM00356 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 InterPro:IPR015940 SMART:SM00165
PROSITE:PS50030 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
SUPFAM:SSF46934 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
RGD:1310340 NextBio:689608 IPI:IPI00391644
Ensembl:ENSRNOT00000037714 ArrayExpress:F1M8G5 Uniprot:F1M8G5
Length = 1338
Score = 182 (69.1 bits), Expect = 3.2e-15, Sum P(5) = 3.2e-15
Identities = 53/178 (29%), Positives = 85/178 (47%)
Query: 402 VQGVVDTAIKIHESMPVGDILAFVIGLEQIEHIIGILKQ--YHNQREDLKLLILPMHGSL 459
++ +++ + S P G IL F+ GL +I+ + L+ N R + +I P+H SL
Sbjct: 783 IEALLEWIVDGKHSYPPGAILVFLPGLAEIKMLYEQLQSNSLFNNRRSHRCVIHPLHSSL 842
Query: 460 PNNEQIKVFRPTPRAMRKIVIATNIAETSITIPGIVYVIDPGFVKARWFNPNTLTNSLVV 519
+ EQ VF P + KI+I+TNIAETSITI +VYVID G +K + ++ SL
Sbjct: 843 SSEEQQAVFVKPPLGVTKIIISTNIAETSITIDDVVYVIDSGKMKEKRYDAGKGMESLED 902
Query: 520 VPISKXXXXXXXXXXXXXXXX---HVYRKNFMYNRLFIHFCVSRNIPTIPNDPKDVKC 574
+S+ H++ + YN H + + +P I P + C
Sbjct: 903 TFVSQANALQRKGRAGRVASGVCFHLFTSHH-YN----HQLLKQQLPEIQRVPLEQLC 955
Score = 178 (67.7 bits), Expect = 3.4e-10, Sum P(3) = 3.4e-10
Identities = 39/94 (41%), Positives = 60/94 (63%)
Query: 604 TEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTKIKYMTEGILMREMMTDP 663
T+PRRIS S+A RV++E +G TVGY IR + + T++ Y T G+L+R + D
Sbjct: 550 TQPRRISAISVAERVAKERAERVGLTVGYQIRLESVKSS-ATRLLYCTTGVLLRRLEGDA 608
Query: 664 LLRKYSVIMLDEVHERTIFTDILMGLLKKILKDK 697
L+ + I++DEVHERT +D L+ +LK I+ +
Sbjct: 609 TLQGVTHIIVDEVHERTEESDFLLLVLKDIVMQR 642
Score = 97 (39.2 bits), Expect = 0.00042, Sum P(4) = 0.00042
Identities = 38/114 (33%), Positives = 59/114 (51%)
Query: 47 LYTEASFS-QLNECTPPEMQRTELSSAVLQLKALGI---HNILR-FS-FPSPPPAQNLRV 100
L+T ++ QL + PE+QR L L++K L + HN+ FS PP +LR
Sbjct: 928 LFTSHHYNHQLLKQQLPEIQRVPLEQLCLRIKILEMFSTHNLQSVFSRLIEPPHVDSLRA 987
Query: 101 ALELLYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLLSSGSV---LDSAVEI 151
+ L LGA+ + LT P+G +A +P+ K++L GS+ LD A+ I
Sbjct: 988 SKVRLRDLGALTPDEKLT-PLGYHLASLPVDVRIGKLMLL-GSIFRCLDPALTI 1039
Score = 68 (29.0 bits), Expect = 3.2e-15, Sum P(5) = 3.2e-15
Identities = 24/95 (25%), Positives = 40/95 (42%)
Query: 701 FECSDEIASILSLLQVQDIFIKPSSGALSLKARVLRRNFEVEQGDLLTLLNIFKFYE--K 758
F C D +I + L + F+ P + L F D L LL +K ++
Sbjct: 1030 FRCLDPALTIAASLAFKSPFVSPWDKKEEANQKKLE--FAFANSDYLALLCAYKGWQLST 1087
Query: 759 QENKK---QFCHKYFFNYKVLKRAAELKNQMILLL 790
+E+ + +C + F + + L+ A LK Q LL
Sbjct: 1088 KESARASYNYCRQNFLSGRTLQEMASLKRQFTELL 1122
Score = 66 (28.3 bits), Expect = 3.2e-15, Sum P(5) = 3.2e-15
Identities = 13/37 (35%), Positives = 25/37 (67%)
Query: 2 TEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILM 38
T G+L+ + D +++ + I++D+VHERT +D L+
Sbjct: 596 TTGVLLRRLEGDATLQGVTHIIVDEVHERTEESDFLL 632
Score = 65 (27.9 bits), Expect = 3.2e-15, Sum P(5) = 3.2e-15
Identities = 16/59 (27%), Positives = 32/59 (54%)
Query: 346 LKRTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYYSNDP--VVNYV 402
++R L++I+ SAT+DA +++ S ++++ G +PV ++ D V YV
Sbjct: 640 MQRATLQVILMSATLDAGLFSKYF-----SYCPVITIPGRAFPVDQFFLEDALAVTRYV 693
Score = 42 (19.8 bits), Expect = 1.4e-07, Sum P(3) = 1.4e-07
Identities = 15/69 (21%), Positives = 32/69 (46%)
Query: 694 LKDKERDFECS-DEIASILSLLQVQDIFIKPSSGA--LSLKARVLRRNFEVEQGDLLTLL 750
L + R C + S LS + Q +F+KP G + + + + ++ D++ ++
Sbjct: 824 LFNNRRSHRCVIHPLHSSLSSEEQQAVFVKPPLGVTKIIISTNIAETSITID--DVVYVI 881
Query: 751 NIFKFYEKQ 759
+ K EK+
Sbjct: 882 DSGKMKEKR 890
Score = 39 (18.8 bits), Expect = 3.2e-15, Sum P(5) = 3.2e-15
Identities = 7/13 (53%), Positives = 11/13 (84%)
Query: 837 LYIHPSSVLYTLQ 849
++IHPSSV Y ++
Sbjct: 1214 VHIHPSSVNYQVR 1226
>UNIPROTKB|G5E5N3 [details] [associations]
symbol:DHX9 "ATP-dependent RNA helicase A" species:9913
"Bos taurus" [GO:0070937 "CRD-mediated mRNA stability complex"
evidence=IEA] [GO:0070934 "CRD-mediated mRNA stabilization"
evidence=IEA] [GO:0034605 "cellular response to heat" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0007623
"circadian rhythm" evidence=IEA] [GO:0005813 "centrosome"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0001085
"RNA polymerase II transcription factor binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003725 "double-stranded RNA
binding" evidence=IEA] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00358 SMART:SM00490
SMART:SM00847 InterPro:IPR014720 GO:GO:0005524 GO:GO:0005813
GO:GO:0034605 GO:GO:0005730 Gene3D:3.30.160.20 GO:GO:0030529
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 UniGene:Bt.5544 GO:GO:0070937
OMA:DDWIRLQ GO:GO:0070934 EMBL:DAAA02043563 EMBL:DAAA02043564
Ensembl:ENSBTAT00000026409 Uniprot:G5E5N3
Length = 1287
Score = 165 (63.1 bits), Expect = 3.9e-15, Sum P(4) = 3.9e-15
Identities = 35/69 (50%), Positives = 44/69 (63%)
Query: 452 ILPMHGSLPNNEQIKVFRPTPRAMRKIVIATNIAETSITIPGIVYVIDPGFVKARWFNP- 510
ILP+H +P EQ KVF P P + KI+++TNIAETSITI +VYVID K + F
Sbjct: 680 ILPLHSQIPREEQRKVFDPVPSGVTKIILSTNIAETSITINDVVYVIDSCKQKVKLFTAH 739
Query: 511 NTLTNSLVV 519
N +TN V
Sbjct: 740 NNMTNYATV 748
Score = 161 (61.7 bits), Expect = 3.6e-10, Sum P(3) = 3.6e-10
Identities = 34/95 (35%), Positives = 58/95 (61%)
Query: 601 IGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTKIKYMTEGILMREMM 660
I +T+PRRIS S+A RV+ E G + GY++RF+ I + T G+L+R++
Sbjct: 437 IVVTQPRRISAVSVAERVAYERGEEPGKSCGYSVRFESILPRPHASIMFCTVGVLLRKLE 496
Query: 661 TDPLLRKYSVIMLDEVHERTIFTDILMGLLKKILK 695
+R S +++DE+HER I TD L+ +L+ +++
Sbjct: 497 AG--IRGISHVIVDEIHERDINTDFLLVVLRDVVQ 529
Score = 120 (47.3 bits), Expect = 1.7e-07, Sum P(3) = 1.7e-07
Identities = 32/95 (33%), Positives = 48/95 (50%)
Query: 47 LYTEASFSQLNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPS--PPPAQNLRVALEL 104
L + A F +L PEM RT L L +K L + I +F + PPP + A
Sbjct: 773 LCSRARFERLETHMTPEMFRTPLHEIALSIKLLRLGGIGQFLAKAIEPPPLDAVIEAEHT 832
Query: 105 LYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLL 139
L L A+D N LT P+G +A++P+ P K+++
Sbjct: 833 LRELDALDANDELT-PLGRILAKLPIEPRFGKMMI 866
Score = 77 (32.2 bits), Expect = 3.9e-15, Sum P(4) = 3.9e-15
Identities = 43/160 (26%), Positives = 65/160 (40%)
Query: 701 FECSDEIASILSLLQVQDIFIKPSSGALSLKARVLRRNFEVEQ-GDLLTLLNIFKFYEK- 758
F D I +I + + FI S G + + RNF + D + LL++F+ ++
Sbjct: 871 FYVGDAICTISAATCFPEPFI--SEGK---RLGYIHRNFAGNRFSDHVALLSVFQAWDDA 925
Query: 759 ----QENKKQFCHKYFFNYKVLKRAAELKNQMILLLKKSSIP---LVTS------P-RNT 804
+E + +FC N L+ E K Q+ +L S P L+T P N
Sbjct: 926 RMGGEEAEIRFCEHKRLNMATLRMTWEAKVQLKEILINSGFPEECLLTQVFTNTGPDNNL 985
Query: 805 NAVLKCLTNGFFSNAAYLHYSGVYRTVRGNEDLYIHPSSV 844
+ V+ L G + N Y T G L IH SSV
Sbjct: 986 DVVISLLAFGVYPNVCYHKEKRKILTTEGRNAL-IHKSSV 1024
Score = 73 (30.8 bits), Expect = 3.9e-15, Sum P(4) = 3.9e-15
Identities = 13/47 (27%), Positives = 26/47 (55%)
Query: 350 QLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYYSND 396
++++++ SAT+D C+++ N I+ V G +PV Y+ D
Sbjct: 533 EVRIVLMSATIDTSMFCEYF-----FNCPIIEVYGRTFPVQEYFLED 574
Score = 63 (27.2 bits), Expect = 3.9e-15, Sum P(4) = 3.9e-15
Identities = 15/49 (30%), Positives = 26/49 (53%)
Query: 2 TEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILMECSRKFSRLYTE 50
T G+L+ + + S +++D++HER I TD L+ R + Y E
Sbjct: 487 TVGVLLRK--LEAGIRGISHVIVDEIHERDINTDFLLVVLRDVVQAYPE 533
Score = 47 (21.6 bits), Expect = 1.6e-13, Sum P(4) = 1.6e-13
Identities = 18/67 (26%), Positives = 32/67 (47%)
Query: 62 PEMQRTELSSAVLQLKALGIHNILRFSFPSPP-PAQNLRVAL-ELLYSLGAMDVNGNLTK 119
P+ R+ ++ + +K +G R + AQ+ ++L LY LG ++ LTK
Sbjct: 202 PDHNRSFIAEMTIYIKQIGRRIFAREHGSNKKLAAQSCALSLVRQLYHLGVIEPYSGLTK 261
Query: 120 PV-GETM 125
GET+
Sbjct: 262 KKEGETV 268
>UNIPROTKB|Q28141 [details] [associations]
symbol:DHX9 "ATP-dependent RNA helicase A" species:9913
"Bos taurus" [GO:0070937 "CRD-mediated mRNA stability complex"
evidence=ISS] [GO:0030529 "ribonucleoprotein complex" evidence=ISS]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003725
"double-stranded RNA binding" evidence=IEA] InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00358 SMART:SM00490 SMART:SM00847 InterPro:IPR014720
GO:GO:0005524 GO:GO:0005730 GO:GO:0003677 Gene3D:3.30.160.20
GO:GO:0030529 GO:GO:0003725 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000247063 EMBL:X82829 IPI:IPI00714708
PIR:I46032 RefSeq:NP_776461.1 UniGene:Bt.5544
ProteinModelPortal:Q28141 SMR:Q28141 STRING:Q28141 PRIDE:Q28141
GeneID:281115 KEGG:bta:281115 CTD:1660 HOVERGEN:HBG039429
InParanoid:Q28141 KO:K13184 OrthoDB:EOG4HHP1J NextBio:20805185
GO:GO:0070937 Uniprot:Q28141
Length = 1287
Score = 165 (63.1 bits), Expect = 3.9e-15, Sum P(4) = 3.9e-15
Identities = 35/69 (50%), Positives = 44/69 (63%)
Query: 452 ILPMHGSLPNNEQIKVFRPTPRAMRKIVIATNIAETSITIPGIVYVIDPGFVKARWFNP- 510
ILP+H +P EQ KVF P P + KI+++TNIAETSITI +VYVID K + F
Sbjct: 680 ILPLHSQIPREEQRKVFDPVPSGVTKIILSTNIAETSITINDVVYVIDSCKQKVKLFTAH 739
Query: 511 NTLTNSLVV 519
N +TN V
Sbjct: 740 NNMTNYATV 748
Score = 161 (61.7 bits), Expect = 3.6e-10, Sum P(3) = 3.6e-10
Identities = 34/95 (35%), Positives = 58/95 (61%)
Query: 601 IGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTKIKYMTEGILMREMM 660
I +T+PRRIS S+A RV+ E G + GY++RF+ I + T G+L+R++
Sbjct: 437 IVVTQPRRISAVSVAERVAYERGEEPGKSCGYSVRFESILPRPHASIMFCTVGVLLRKLE 496
Query: 661 TDPLLRKYSVIMLDEVHERTIFTDILMGLLKKILK 695
+R S +++DE+HER I TD L+ +L+ +++
Sbjct: 497 AG--IRGISHVIVDEIHERDINTDFLLVVLRDVVQ 529
Score = 120 (47.3 bits), Expect = 1.7e-07, Sum P(3) = 1.7e-07
Identities = 32/95 (33%), Positives = 48/95 (50%)
Query: 47 LYTEASFSQLNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPS--PPPAQNLRVALEL 104
L + A F +L PEM RT L L +K L + I +F + PPP + A
Sbjct: 773 LCSRARFERLETHMTPEMFRTPLHEIALSIKLLRLGGIGQFLAKAIEPPPLDAVIEAEHT 832
Query: 105 LYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLL 139
L L A+D N LT P+G +A++P+ P K+++
Sbjct: 833 LRELDALDANDELT-PLGRILAKLPIEPRFGKMMI 866
Score = 77 (32.2 bits), Expect = 3.9e-15, Sum P(4) = 3.9e-15
Identities = 43/160 (26%), Positives = 65/160 (40%)
Query: 701 FECSDEIASILSLLQVQDIFIKPSSGALSLKARVLRRNFEVEQ-GDLLTLLNIFKFYEK- 758
F D I +I + + FI S G + + RNF + D + LL++F+ ++
Sbjct: 871 FYVGDAICTISAATCFPEPFI--SEGK---RLGYIHRNFAGNRFSDHVALLSVFQAWDDA 925
Query: 759 ----QENKKQFCHKYFFNYKVLKRAAELKNQMILLLKKSSIP---LVTS------P-RNT 804
+E + +FC N L+ E K Q+ +L S P L+T P N
Sbjct: 926 RMGGEEAEIRFCEHKRLNMATLRMTWEAKVQLKEILINSGFPEECLLTQVFTNTGPDNNL 985
Query: 805 NAVLKCLTNGFFSNAAYLHYSGVYRTVRGNEDLYIHPSSV 844
+ V+ L G + N Y T G L IH SSV
Sbjct: 986 DVVISLLAFGVYPNVCYHKEKRKILTTEGRNAL-IHKSSV 1024
Score = 73 (30.8 bits), Expect = 3.9e-15, Sum P(4) = 3.9e-15
Identities = 13/47 (27%), Positives = 26/47 (55%)
Query: 350 QLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYYSND 396
++++++ SAT+D C+++ N I+ V G +PV Y+ D
Sbjct: 533 EVRIVLMSATIDTSMFCEYF-----FNCPIIEVYGRTFPVQEYFLED 574
Score = 63 (27.2 bits), Expect = 3.9e-15, Sum P(4) = 3.9e-15
Identities = 15/49 (30%), Positives = 26/49 (53%)
Query: 2 TEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILMECSRKFSRLYTE 50
T G+L+ + + S +++D++HER I TD L+ R + Y E
Sbjct: 487 TVGVLLRK--LEAGIRGISHVIVDEIHERDINTDFLLVVLRDVVQAYPE 533
Score = 47 (21.6 bits), Expect = 1.6e-13, Sum P(4) = 1.6e-13
Identities = 18/67 (26%), Positives = 32/67 (47%)
Query: 62 PEMQRTELSSAVLQLKALGIHNILRFSFPSPP-PAQNLRVAL-ELLYSLGAMDVNGNLTK 119
P+ R+ ++ + +K +G R + AQ+ ++L LY LG ++ LTK
Sbjct: 202 PDHNRSFIAEMTIYIKQIGRRIFAREHGSNKKLAAQSCALSLVRQLYHLGVIEPYSGLTK 261
Query: 120 PV-GETM 125
GET+
Sbjct: 262 KKEGETV 268
>UNIPROTKB|F1LSC4 [details] [associations]
symbol:Dhx57 "Protein Dhx57" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR000571 InterPro:IPR001650
InterPro:IPR006575 InterPro:IPR007502 InterPro:IPR009060
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00642
Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103 PROSITE:PS51194
SMART:SM00356 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 InterPro:IPR015940 SMART:SM00165
PROSITE:PS50030 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
SUPFAM:SSF46934 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 CTD:90957 KO:K13026 OMA:RAYKGWQ
IPI:IPI00369334 RefSeq:NP_001178836.1 UniGene:Rn.15951
Ensembl:ENSRNOT00000037705 GeneID:366532 KEGG:rno:366532
RGD:1310340 NextBio:689608 ArrayExpress:F1LSC4 Uniprot:F1LSC4
Length = 1391
Score = 182 (69.1 bits), Expect = 4.0e-15, Sum P(5) = 4.0e-15
Identities = 53/178 (29%), Positives = 85/178 (47%)
Query: 402 VQGVVDTAIKIHESMPVGDILAFVIGLEQIEHIIGILKQ--YHNQREDLKLLILPMHGSL 459
++ +++ + S P G IL F+ GL +I+ + L+ N R + +I P+H SL
Sbjct: 836 IEALLEWIVDGKHSYPPGAILVFLPGLAEIKMLYEQLQSNSLFNNRRSHRCVIHPLHSSL 895
Query: 460 PNNEQIKVFRPTPRAMRKIVIATNIAETSITIPGIVYVIDPGFVKARWFNPNTLTNSLVV 519
+ EQ VF P + KI+I+TNIAETSITI +VYVID G +K + ++ SL
Sbjct: 896 SSEEQQAVFVKPPLGVTKIIISTNIAETSITIDDVVYVIDSGKMKEKRYDAGKGMESLED 955
Query: 520 VPISKXXXXXXXXXXXXXXXX---HVYRKNFMYNRLFIHFCVSRNIPTIPNDPKDVKC 574
+S+ H++ + YN H + + +P I P + C
Sbjct: 956 TFVSQANALQRKGRAGRVASGVCFHLFTSHH-YN----HQLLKQQLPEIQRVPLEQLC 1008
Score = 178 (67.7 bits), Expect = 3.9e-10, Sum P(3) = 3.9e-10
Identities = 39/94 (41%), Positives = 60/94 (63%)
Query: 604 TEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTKIKYMTEGILMREMMTDP 663
T+PRRIS S+A RV++E +G TVGY IR + + T++ Y T G+L+R + D
Sbjct: 603 TQPRRISAISVAERVAKERAERVGLTVGYQIRLESVKSS-ATRLLYCTTGVLLRRLEGDA 661
Query: 664 LLRKYSVIMLDEVHERTIFTDILMGLLKKILKDK 697
L+ + I++DEVHERT +D L+ +LK I+ +
Sbjct: 662 TLQGVTHIIVDEVHERTEESDFLLLVLKDIVMQR 695
Score = 97 (39.2 bits), Expect = 0.00049, Sum P(4) = 0.00049
Identities = 38/114 (33%), Positives = 59/114 (51%)
Query: 47 LYTEASFS-QLNECTPPEMQRTELSSAVLQLKALGI---HNILR-FS-FPSPPPAQNLRV 100
L+T ++ QL + PE+QR L L++K L + HN+ FS PP +LR
Sbjct: 981 LFTSHHYNHQLLKQQLPEIQRVPLEQLCLRIKILEMFSTHNLQSVFSRLIEPPHVDSLRA 1040
Query: 101 ALELLYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLLSSGSV---LDSAVEI 151
+ L LGA+ + LT P+G +A +P+ K++L GS+ LD A+ I
Sbjct: 1041 SKVRLRDLGALTPDEKLT-PLGYHLASLPVDVRIGKLMLL-GSIFRCLDPALTI 1092
Score = 68 (29.0 bits), Expect = 4.0e-15, Sum P(5) = 4.0e-15
Identities = 24/95 (25%), Positives = 40/95 (42%)
Query: 701 FECSDEIASILSLLQVQDIFIKPSSGALSLKARVLRRNFEVEQGDLLTLLNIFKFYE--K 758
F C D +I + L + F+ P + L F D L LL +K ++
Sbjct: 1083 FRCLDPALTIAASLAFKSPFVSPWDKKEEANQKKLE--FAFANSDYLALLCAYKGWQLST 1140
Query: 759 QENKK---QFCHKYFFNYKVLKRAAELKNQMILLL 790
+E+ + +C + F + + L+ A LK Q LL
Sbjct: 1141 KESARASYNYCRQNFLSGRTLQEMASLKRQFTELL 1175
Score = 66 (28.3 bits), Expect = 4.0e-15, Sum P(5) = 4.0e-15
Identities = 13/37 (35%), Positives = 25/37 (67%)
Query: 2 TEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILM 38
T G+L+ + D +++ + I++D+VHERT +D L+
Sbjct: 649 TTGVLLRRLEGDATLQGVTHIIVDEVHERTEESDFLL 685
Score = 65 (27.9 bits), Expect = 4.0e-15, Sum P(5) = 4.0e-15
Identities = 16/59 (27%), Positives = 32/59 (54%)
Query: 346 LKRTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYYSNDP--VVNYV 402
++R L++I+ SAT+DA +++ S ++++ G +PV ++ D V YV
Sbjct: 693 MQRATLQVILMSATLDAGLFSKYF-----SYCPVITIPGRAFPVDQFFLEDALAVTRYV 746
Score = 42 (19.8 bits), Expect = 1.6e-07, Sum P(3) = 1.6e-07
Identities = 15/69 (21%), Positives = 32/69 (46%)
Query: 694 LKDKERDFECS-DEIASILSLLQVQDIFIKPSSGA--LSLKARVLRRNFEVEQGDLLTLL 750
L + R C + S LS + Q +F+KP G + + + + ++ D++ ++
Sbjct: 877 LFNNRRSHRCVIHPLHSSLSSEEQQAVFVKPPLGVTKIIISTNIAETSITID--DVVYVI 934
Query: 751 NIFKFYEKQ 759
+ K EK+
Sbjct: 935 DSGKMKEKR 943
Score = 39 (18.8 bits), Expect = 4.0e-15, Sum P(5) = 4.0e-15
Identities = 7/13 (53%), Positives = 11/13 (84%)
Query: 837 LYIHPSSVLYTLQ 849
++IHPSSV Y ++
Sbjct: 1267 VHIHPSSVNYQVR 1279
>DICTYBASE|DDB_G0267516 [details] [associations]
symbol:dhx57 "RWD domain-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR006575
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 Pfam:PF05773 PROSITE:PS00690 PROSITE:PS50908
PROSITE:PS51194 SMART:SM00490 SMART:SM00591 SMART:SM00847
dictyBase:DDB_G0267516 GO:GO:0005524 GenomeReviews:CM000150_GR
EMBL:AAFI02000003 GO:GO:0003676 InterPro:IPR015940 PROSITE:PS50030
Gene3D:3.10.110.10 InterPro:IPR016135 SUPFAM:SSF54495
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K13026
RefSeq:XP_647095.1 ProteinModelPortal:Q55GT9
EnsemblProtists:DDB0235268 GeneID:8615899 KEGG:ddi:DDB_G0267516
OMA:EVHERST Uniprot:Q55GT9
Length = 1451
Score = 152 (58.6 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 40/122 (32%), Positives = 71/122 (58%)
Query: 604 TEPRRISVTSLANRVSEE-----LRTTLGHTVGYTIRFDDCTTEDVTKIKYMTEGILMRE 658
T+PRRIS +A RVS E + ++G VGY IR + ++ T++ + T GIL+R
Sbjct: 680 TQPRRISAIGVAERVSYEWNCGTVENSIGGLVGYQIRNESKRSQS-TRLLFCTTGILLRR 738
Query: 659 MMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKILKDKERDFECSDEIASILSLLQVQD 718
++ + S I++DEVHER+ D L+ +L++I+ K +D + +++ L+ Q+ +
Sbjct: 739 ILDVSNISDLSHIIIDEVHERSTDNDFLLIILREIIS-KRKDLKII-LMSATLNAKQIAN 796
Query: 719 IF 720
F
Sbjct: 797 YF 798
Score = 147 (56.8 bits), Expect = 4.2e-15, Sum P(4) = 4.2e-15
Identities = 42/101 (41%), Positives = 54/101 (53%)
Query: 421 ILAFVIGLEQIEHIIGIL-KQYHNQREDL--KLLILPMHGSLPNNEQIKVFRPTPRAMRK 477
IL FV GL I + L K E + ++ +P+H SL +Q KVF P K
Sbjct: 900 ILVFVPGLSDILELCSRLGKPISTFTEAICQRIWCVPLHSSLSPKDQQKVFEKAPNGRVK 959
Query: 478 IVIATNIAETSITIPGIVYVIDPGFVKARWFNPNTLTNSLV 518
+VIATNIAETSITI + V+D G V FN T NS++
Sbjct: 960 VVIATNIAETSITIEDVEIVVDCGRVNQMTFNSIT-GNSVM 999
Score = 89 (36.4 bits), Expect = 4.2e-15, Sum P(4) = 4.2e-15
Identities = 20/56 (35%), Positives = 34/56 (60%)
Query: 347 KRTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYYSND--PVVN 400
KR LK+I+ SAT++A++I ++ + S I S+ G +PV Y N+ P++N
Sbjct: 776 KRKDLKIILMSATLNAKQIANYFKCTDDS---IFSIPGFTFPVKNIYINEVLPLIN 828
Score = 89 (36.4 bits), Expect = 4.2e-15, Sum P(4) = 4.2e-15
Identities = 25/95 (26%), Positives = 45/95 (47%)
Query: 701 FECSDEIASILSLLQVQDIFIKPSSGALSLKARVLRRNFEVEQGDLLTLLNIFKFYEK-- 758
F C D I +I + L + F+ P + R + + Q D TL+N + + K
Sbjct: 1133 FRCLDPILTIAATLNYKSPFLNPPDKTI----RPMDKFSSPNQSDHQTLINAYNSWRKSI 1188
Query: 759 QE-NKKQFCHKYFFNYKVLKRAAELKNQMILLLKK 792
Q+ N+ QFC + + + L+ +LK Q + +L +
Sbjct: 1189 QDGNEYQFCRENYLSIPTLRTIQDLKLQFVEILSE 1223
Score = 81 (33.6 bits), Expect = 0.00075, Sum P(3) = 0.00075
Identities = 26/104 (25%), Positives = 51/104 (49%)
Query: 46 RLYTEASFSQLNECTPPEMQRTELSSAVLQLKAL-------GIHNILRFSFPSPPPAQNL 98
+++T++ SQL + PE+ RT L L +K I + L + PP ++ +
Sbjct: 1026 KVFTKSMESQLQDQDTPEILRTSLQQLCLHVKLFLKNNKNTTIQDFLNRAI-EPPSSEQI 1084
Query: 99 RVALELLYSLGAMDVNGNLTK---PVGETMAEMPLHPIHAKVLL 139
+ ++ L S+ A+ +N + P+G +A +P+ K+LL
Sbjct: 1085 QSSINELISIDALKINQQQQQELTPLGYHLASLPVDVYIGKMLL 1128
Score = 56 (24.8 bits), Expect = 4.2e-15, Sum P(4) = 4.2e-15
Identities = 13/37 (35%), Positives = 21/37 (56%)
Query: 2 TEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILM 38
T GIL+ ++ S I++D+VHER+ D L+
Sbjct: 731 TTGILLRRILDVSNISDLSHIIIDEVHERSTDNDFLL 767
>UNIPROTKB|F1RLG0 [details] [associations]
symbol:YTHDC2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR002110 InterPro:IPR001650
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS50088
PROSITE:PS51194 SMART:SM00248 SMART:SM00490 SMART:SM00847
GO:GO:0005524 Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796
SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0003676 GO:GO:0004386
InterPro:IPR014001 PROSITE:PS51192 GeneTree:ENSGT00700000104393
InterPro:IPR011709 Pfam:PF07717 InterPro:IPR007275 Pfam:PF04146
PROSITE:PS50882 OMA:RAFWESS EMBL:CU462841
Ensembl:ENSSSCT00000015529 Uniprot:F1RLG0
Length = 1151
Score = 161 (61.7 bits), Expect = 5.2e-15, Sum P(3) = 5.2e-15
Identities = 48/166 (28%), Positives = 85/166 (51%)
Query: 367 QFYNISASS----NATILSVKGHLYPVSVYYSNDPVVNYVQGVVDTAIKIHESMPVGDIL 422
+F N+ SS N + LS + + ++S D + ++ I S G +L
Sbjct: 287 EFGNLDESSLVQTNGSDLSAEDRELLKAYHHSFDDEKVDLDLIMHLLYNICHSCDAGAVL 346
Query: 423 AFVIGLEQI----EHIIGILKQYHNQREDLKLLILPMHGSLPNNEQIKVFRPTPRAMRKI 478
F+ G ++I + I+ K++ + + + +H ++ ++Q KV + P +RKI
Sbjct: 347 IFLPGYDEIVGLRDRILFDDKRFADNTHS-RYQVFMLHSNMQTSDQKKVLKNPPAGVRKI 405
Query: 479 VIATNIAETSITIPGIVYVIDPGFVKARWFNPNTLTNSLVVVPISK 524
+++TNIAETSIT+ +V+VID G VK + F+ L +V ISK
Sbjct: 406 ILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISK 451
Score = 117 (46.2 bits), Expect = 2.4e-10, Sum P(3) = 2.4e-10
Identities = 37/104 (35%), Positives = 54/104 (51%)
Query: 40 CSRKFSRLYTEASFSQLNECTPPEMQRTELSSAVLQLKALGIHN--ILRFSF--PSPPPA 95
C R FSRL F + E PE+ R L L K L N I F P PPPA
Sbjct: 469 CFRLFSRL----RFQNMLEFQTPELLRMPLQELCLHTKLLAPVNCPIADFLMKAPEPPPA 524
Query: 96 QNLRVALELLYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLL 139
+R A+++L ++ AMD +LT+ +G +A++P+ P K++L
Sbjct: 525 LIVRNAVQMLKTIDAMDAWEDLTE-LGYHLADLPVEPHLGKMVL 567
Score = 114 (45.2 bits), Expect = 5.2e-15, Sum P(3) = 5.2e-15
Identities = 42/165 (25%), Positives = 72/165 (43%)
Query: 702 ECSDEIASILSLLQVQDIFIKPSSGALSLKARVLRRNFEVEQ-GDLLTLLNIFKFYEKQE 760
+C D I +I L +D F+ P+ + A + R+ F D + LL F+ ++K
Sbjct: 573 KCLDPILTIACTLAYRDPFVLPTQASQKRAAMLCRKRFTAGTFSDHMALLRAFQAWQKAR 632
Query: 761 N---KKQFCHKYFFNYKVLKRAAELKNQMILLLKKSSIPLVTSPR-----NTN----AVL 808
+ ++ FC K F + ++ ++ Q++ L+ S NTN AV+
Sbjct: 633 SDGWERAFCEKNFLSQATMEIIIGMRTQLLGQLRASGFVRARGGGDIRDVNTNSENWAVV 692
Query: 809 KC-LTNGFFSNAAYLHYSGVYRTVRGNEDLYIHPSSVLYTLQQPQ 852
K L G + N ++ V T + + HP+SVL QPQ
Sbjct: 693 KAALVAGMYPNLVHVDRENVVLTGPKEKKVRFHPTSVL---SQPQ 734
Score = 92 (37.4 bits), Expect = 7.2e-07, Sum P(2) = 7.2e-07
Identities = 19/52 (36%), Positives = 33/52 (63%)
Query: 645 TKIKYMTEGILMREMMT-DPLLRKYSVIMLDEVHERTIFTDILMGLLKKILK 695
T + + T G+L+R +M D L + +++DEVHER F+D L+ L+ +L+
Sbjct: 6 TLLTFCTNGVLLRTLMAGDSTLSTVTHVIVDEVHERDRFSDFLLTKLRDLLQ 57
Score = 56 (24.8 bits), Expect = 5.2e-15, Sum P(3) = 5.2e-15
Identities = 12/38 (31%), Positives = 23/38 (60%)
Query: 2 TEGILIEN-DDHDPSVEKYSVIMLDKVHERTIFTDILM 38
T G+L+ D ++ + +++D+VHER F+D L+
Sbjct: 12 TNGVLLRTLMAGDSTLSTVTHVIVDEVHERDRFSDFLL 49
>UNIPROTKB|I3LQ47 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005739 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 OMA:WLLYQEK GeneTree:ENSGT00550000074257
EMBL:CU929534 Ensembl:ENSSSCT00000025611 Uniprot:I3LQ47
Length = 1370
Score = 179 (68.1 bits), Expect = 6.0e-09, Sum P(3) = 6.0e-09
Identities = 41/99 (41%), Positives = 62/99 (62%)
Query: 604 TEPRRISVTSLANRVSEELRTTLG-----HTVGYTIRFDDCTTEDVTKIKYMTEGILMRE 658
T+PRRIS SLA RV +EL G GY IR + +E T++ Y T G+L+R+
Sbjct: 625 TQPRRISAVSLATRVCDELGCENGPGGKNSLCGYQIRMESRASES-TRLLYCTTGVLLRK 683
Query: 659 MMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKILKDK 697
+ D LL S +++DEVHER++ +D L+ +LK+IL+ +
Sbjct: 684 LQEDGLLTNVSHVIVDEVHERSVQSDFLLIILKEILQKR 722
Score = 173 (66.0 bits), Expect = 6.0e-15, Sum P(4) = 6.0e-15
Identities = 46/156 (29%), Positives = 73/156 (46%)
Query: 419 GDILAFVIGLEQIEHIIGILKQYHNQREDLKLLILPMHGSLPNNEQIKVFRPTPRAMRKI 478
G +L F+ GL I+ + +L + + ++ +H L +Q F P+ +RKI
Sbjct: 868 GAVLIFLPGLAHIQQLYDLLSTDRRFFSE-RYKVIALHSILSTQDQAAAFTLPPQGVRKI 926
Query: 479 VIATNIAETSITIPGIVYVIDPGFVKARWFNPNTLTNSLVVVPISKXXXXXXXXXXXXXX 538
V+ATNIAET ITIP +V+VID G K ++ ++ +SLV +SK
Sbjct: 927 VLATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQGRAGRVR 986
Query: 539 XXHVYRKNFMYNRLFIHFCVSRNIPTIPNDPKDVKC 574
+R MY R + ++P I P + C
Sbjct: 987 DGFCFR---MYTRERFEGFMDYSVPEILRVPLEELC 1019
Score = 86 (35.3 bits), Expect = 6.0e-15, Sum P(4) = 6.0e-15
Identities = 19/50 (38%), Positives = 30/50 (60%)
Query: 347 KRTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYYSND 396
KR+ L LI+ SATVD+E+ ++ ++ IL + G YPV V++ D
Sbjct: 721 KRSDLHLILMSATVDSEKFSTYF-----THCPILRISGRSYPVEVFHLED 765
Score = 65 (27.9 bits), Expect = 6.0e-15, Sum P(4) = 6.0e-15
Identities = 12/37 (32%), Positives = 23/37 (62%)
Query: 2 TEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILM 38
T G+L+ D + S +++D+VHER++ +D L+
Sbjct: 676 TTGVLLRKLQEDGLLTNVSHVIVDEVHERSVQSDFLL 712
Score = 53 (23.7 bits), Expect = 6.0e-15, Sum P(4) = 6.0e-15
Identities = 20/100 (20%), Positives = 46/100 (46%)
Query: 701 FECSDEIASILSLLQVQDIFIKPSSGALSLKARVLRRNFEVEQGDLLTLLNIFKFYEK-- 758
F C D +A++ +++ + F P G +A + + + D LT+ N + ++K
Sbjct: 1092 FGCLDPVATLAAVMTEKSPFTTPI-GRKD-EADLAKSALAMADSDHLTIYNAYLGWKKAQ 1149
Query: 759 QE----NKKQFCHKYFFNYKVLKRAAELKNQMILLLKKSS 794
QE ++ +C + F N L + ++ L+ +++
Sbjct: 1150 QEGGYRSEIAYCRRNFLNRTSLLTLERRRTTLLKLMNENA 1189
Score = 49 (22.3 bits), Expect = 1.5e-14, Sum P(4) = 1.5e-14
Identities = 33/115 (28%), Positives = 48/115 (41%)
Query: 736 RRNFEVEQGDLLTLLNIFKFYEKQENKKQFCHKYF-FNYKVLKRAAELKNQMILLLKKSS 794
RRNF + + LLTL K N+ F H + F + + + L Q I LLK
Sbjct: 1162 RRNF-LNRTSLLTLERRRTTLLKLMNENAFTHIFIAFTFYSSRASQTLSFQEIALLKA-- 1218
Query: 795 IPLVTSPRNTNAVLKCLTNGFFSNAAYLHYSGVYRTVRGNEDLYIHPSSVLYTLQ 849
++T+ N V K + L + + T +G +HPSSV LQ
Sbjct: 1219 --VLTAGLYDN-VGKIIYTKSVDVTEKL--ACIVETAQGKAQ--VHPSSVNRDLQ 1266
Score = 41 (19.5 bits), Expect = 6.0e-09, Sum P(3) = 6.0e-09
Identities = 9/27 (33%), Positives = 15/27 (55%)
Query: 421 ILAFVIGLEQIEHIIGILKQYHNQRED 447
IL VI + + IIG++ ++ Q D
Sbjct: 83 ILKVVINNKLEQKIIGVINEHKKQNND 109
Score = 40 (19.1 bits), Expect = 1.2e-07, Sum P(3) = 1.2e-07
Identities = 16/63 (25%), Positives = 29/63 (46%)
Query: 713 LLQVQDIFIKPSSGALSLKARVLRRNFEVEQGDLLTLLNIFKFYEKQENKKQFCHKYFFN 772
L + ++I I +S A +K + V+ G T ++ FY+K N+ Q Y
Sbjct: 785 LEEEEEITINVTSKAGGIKK--YQEYIPVQTG---TSADLNPFYQKYSNRTQHAILYMNP 839
Query: 773 YKV 775
+K+
Sbjct: 840 HKI 842
>CGD|CAL0005664 [details] [associations]
symbol:orf19.6818 species:5476 "Candida albicans" [GO:0005829
"cytosol" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR006575 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
Pfam:PF05773 PROSITE:PS00690 PROSITE:PS50908 PROSITE:PS51194
SMART:SM00490 SMART:SM00591 SMART:SM00847 CGD:CAL0005664
GO:GO:0005524 GO:GO:0003676 Gene3D:3.10.110.10 InterPro:IPR016135
SUPFAM:SSF54495 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
EMBL:AACQ01000029 EMBL:AACQ01000028 RefSeq:XP_719795.1
RefSeq:XP_719912.1 ProteinModelPortal:Q5ADM3 GeneID:3638543
GeneID:3638643 KEGG:cal:CaO19.14110 KEGG:cal:CaO19.6818
Uniprot:Q5ADM3
Length = 1370
Score = 187 (70.9 bits), Expect = 1.9e-11, Sum P(4) = 1.9e-11
Identities = 41/103 (39%), Positives = 68/103 (66%)
Query: 596 YDTKLIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTKIKYMTEGIL 655
+ TK+I T+PRR+S SLA+R+S+E +G GY IR ++ T+ + T+I + T G+L
Sbjct: 620 FTTKII-CTQPRRLSAVSLADRISKERVDEVGSETGYIIRGENKTSSN-TRITFATTGVL 677
Query: 656 MREMMTDP---LLRKYSVIMLDEVHERTIFTDILMGLLKKILK 695
+R + + +L+ I++DEVHER++ D L+ LLKK++K
Sbjct: 678 LRMLQSSKKNGVLKNIGYILIDEVHERSVDADFLLILLKKMIK 720
Score = 185 (70.2 bits), Expect = 6.8e-15, Sum P(5) = 6.8e-15
Identities = 46/124 (37%), Positives = 69/124 (55%)
Query: 395 NDPVVNYVQGVVDTAIKIHESMPVGDILAFVIGLEQIEHIIGILKQYHNQREDLKLLILP 454
N ++ +V +D + E+ G IL F+ G+ +I I K+ N+ D K + LP
Sbjct: 798 NYELIAHVTRFIDKRLT-QEAKQDGSILIFLPGVLEISSTI---KEI-NKSSDNKFMALP 852
Query: 455 MHGSLPNNEQIKVFRPTPRAMRKIVIATNIAETSITIPGIVYVIDPGFVKARWFNPNTLT 514
+H L + EQ +F+ P+ RK+V++TNIAETSITIP V VID G K +F+ T
Sbjct: 853 LHSGLTSAEQKSIFKTAPKGKRKVVVSTNIAETSITIPDCVAVIDTGKSKNLFFDHKLNT 912
Query: 515 NSLV 518
L+
Sbjct: 913 TKLI 916
Score = 124 (48.7 bits), Expect = 1.4e-06, Sum P(4) = 1.4e-06
Identities = 32/95 (33%), Positives = 55/95 (57%)
Query: 47 LYTEASFSQLNECTPPEMQRTELSSAVLQLKALGIHNILRF--SFPSPPPAQNLRVALEL 104
LYT+ +F + + PE++RT L + L +K++GI N+ F S P +L A +
Sbjct: 943 LYTKETFEAMQKQPIPEIKRTRLENLYLVVKSMGISNVNEFLSSGLDAPDKSSLDKANQF 1002
Query: 105 LYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLL 139
L+ +GA+ N +LTK +G ++ +P P AK+L+
Sbjct: 1003 LHEIGALQEN-SLTK-LGNYISYLPTDPQSAKLLI 1035
Score = 74 (31.1 bits), Expect = 6.8e-15, Sum P(5) = 6.8e-15
Identities = 27/123 (21%), Positives = 51/123 (41%)
Query: 701 FECSDEIASILSLLQVQDIFIKPSSGALSLKARVLRRNFEVEQGDLLTLLNIFKFYEKQE 760
F C D ++ ++ FI LK +++ F QGD +++ N + Y +
Sbjct: 1040 FGCLDICLTLAAISSTGSPFINSYEQRDKLKQ--IQKKFGNGQGDFISMANAYNAYMSNK 1097
Query: 761 NKKQFCHKYFFNYKVLKRAAELKNQMILLLKKSSIP--LVTSPRNTNAVLKCLTNGFFSN 818
+K+ F + + +Y +K ++Q + LL + + N NA L G +
Sbjct: 1098 SKR-FLTENYLSYTTIKDITSTRSQYLSLLVELGFVNRKLDDSCNKNAENWPLIRGIIAG 1156
Query: 819 AAY 821
A Y
Sbjct: 1157 AFY 1159
Score = 61 (26.5 bits), Expect = 6.8e-15, Sum P(5) = 6.8e-15
Identities = 13/44 (29%), Positives = 23/44 (52%)
Query: 350 QLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYY 393
+LK+I+ SAT+ + F+ T L ++G YP+ +Y
Sbjct: 724 KLKIILLSATISVDTFINFFE----KPLTPLHIEGRTYPIQDFY 763
Score = 55 (24.4 bits), Expect = 6.8e-15, Sum P(5) = 6.8e-15
Identities = 12/45 (26%), Positives = 26/45 (57%)
Query: 2 TEGILI---ENDDHDPSVEKYSVIMLDKVHERTIFTDILMECSRK 43
T G+L+ ++ + ++ I++D+VHER++ D L+ +K
Sbjct: 673 TTGVLLRMLQSSKKNGVLKNIGYILIDEVHERSVDADFLLILLKK 717
Score = 42 (19.8 bits), Expect = 6.8e-15, Sum P(5) = 6.8e-15
Identities = 7/10 (70%), Positives = 10/10 (100%)
Query: 837 LYIHPSSVLY 846
++IHPSSVL+
Sbjct: 1204 VFIHPSSVLF 1213
Score = 38 (18.4 bits), Expect = 1.9e-11, Sum P(4) = 1.9e-11
Identities = 17/70 (24%), Positives = 32/70 (45%)
Query: 386 LYPVSVY--YSNDPVVNYVQGVVDTAIKIHESMPVGDILAFVIGLEQIEHIIGILKQYHN 443
L P+ Y YS N + +V T + +H + ++ ++ + II + Y N
Sbjct: 107 LIPIKFYPNYSPKETTNEARHMVATFV-LHR-------INYIKNMKMLLPII--FRDYWN 156
Query: 444 QREDLKLLIL 453
+ ED +L +L
Sbjct: 157 ELEDERLKLL 166
>UNIPROTKB|Q5ADM3 [details] [associations]
symbol:CaO19.14110 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR006575 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
Pfam:PF05773 PROSITE:PS00690 PROSITE:PS50908 PROSITE:PS51194
SMART:SM00490 SMART:SM00591 SMART:SM00847 CGD:CAL0005664
GO:GO:0005524 GO:GO:0003676 Gene3D:3.10.110.10 InterPro:IPR016135
SUPFAM:SSF54495 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
EMBL:AACQ01000029 EMBL:AACQ01000028 RefSeq:XP_719795.1
RefSeq:XP_719912.1 ProteinModelPortal:Q5ADM3 GeneID:3638543
GeneID:3638643 KEGG:cal:CaO19.14110 KEGG:cal:CaO19.6818
Uniprot:Q5ADM3
Length = 1370
Score = 187 (70.9 bits), Expect = 1.9e-11, Sum P(4) = 1.9e-11
Identities = 41/103 (39%), Positives = 68/103 (66%)
Query: 596 YDTKLIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTKIKYMTEGIL 655
+ TK+I T+PRR+S SLA+R+S+E +G GY IR ++ T+ + T+I + T G+L
Sbjct: 620 FTTKII-CTQPRRLSAVSLADRISKERVDEVGSETGYIIRGENKTSSN-TRITFATTGVL 677
Query: 656 MREMMTDP---LLRKYSVIMLDEVHERTIFTDILMGLLKKILK 695
+R + + +L+ I++DEVHER++ D L+ LLKK++K
Sbjct: 678 LRMLQSSKKNGVLKNIGYILIDEVHERSVDADFLLILLKKMIK 720
Score = 185 (70.2 bits), Expect = 6.8e-15, Sum P(5) = 6.8e-15
Identities = 46/124 (37%), Positives = 69/124 (55%)
Query: 395 NDPVVNYVQGVVDTAIKIHESMPVGDILAFVIGLEQIEHIIGILKQYHNQREDLKLLILP 454
N ++ +V +D + E+ G IL F+ G+ +I I K+ N+ D K + LP
Sbjct: 798 NYELIAHVTRFIDKRLT-QEAKQDGSILIFLPGVLEISSTI---KEI-NKSSDNKFMALP 852
Query: 455 MHGSLPNNEQIKVFRPTPRAMRKIVIATNIAETSITIPGIVYVIDPGFVKARWFNPNTLT 514
+H L + EQ +F+ P+ RK+V++TNIAETSITIP V VID G K +F+ T
Sbjct: 853 LHSGLTSAEQKSIFKTAPKGKRKVVVSTNIAETSITIPDCVAVIDTGKSKNLFFDHKLNT 912
Query: 515 NSLV 518
L+
Sbjct: 913 TKLI 916
Score = 124 (48.7 bits), Expect = 1.4e-06, Sum P(4) = 1.4e-06
Identities = 32/95 (33%), Positives = 55/95 (57%)
Query: 47 LYTEASFSQLNECTPPEMQRTELSSAVLQLKALGIHNILRF--SFPSPPPAQNLRVALEL 104
LYT+ +F + + PE++RT L + L +K++GI N+ F S P +L A +
Sbjct: 943 LYTKETFEAMQKQPIPEIKRTRLENLYLVVKSMGISNVNEFLSSGLDAPDKSSLDKANQF 1002
Query: 105 LYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLL 139
L+ +GA+ N +LTK +G ++ +P P AK+L+
Sbjct: 1003 LHEIGALQEN-SLTK-LGNYISYLPTDPQSAKLLI 1035
Score = 74 (31.1 bits), Expect = 6.8e-15, Sum P(5) = 6.8e-15
Identities = 27/123 (21%), Positives = 51/123 (41%)
Query: 701 FECSDEIASILSLLQVQDIFIKPSSGALSLKARVLRRNFEVEQGDLLTLLNIFKFYEKQE 760
F C D ++ ++ FI LK +++ F QGD +++ N + Y +
Sbjct: 1040 FGCLDICLTLAAISSTGSPFINSYEQRDKLKQ--IQKKFGNGQGDFISMANAYNAYMSNK 1097
Query: 761 NKKQFCHKYFFNYKVLKRAAELKNQMILLLKKSSIP--LVTSPRNTNAVLKCLTNGFFSN 818
+K+ F + + +Y +K ++Q + LL + + N NA L G +
Sbjct: 1098 SKR-FLTENYLSYTTIKDITSTRSQYLSLLVELGFVNRKLDDSCNKNAENWPLIRGIIAG 1156
Query: 819 AAY 821
A Y
Sbjct: 1157 AFY 1159
Score = 61 (26.5 bits), Expect = 6.8e-15, Sum P(5) = 6.8e-15
Identities = 13/44 (29%), Positives = 23/44 (52%)
Query: 350 QLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYY 393
+LK+I+ SAT+ + F+ T L ++G YP+ +Y
Sbjct: 724 KLKIILLSATISVDTFINFFE----KPLTPLHIEGRTYPIQDFY 763
Score = 55 (24.4 bits), Expect = 6.8e-15, Sum P(5) = 6.8e-15
Identities = 12/45 (26%), Positives = 26/45 (57%)
Query: 2 TEGILI---ENDDHDPSVEKYSVIMLDKVHERTIFTDILMECSRK 43
T G+L+ ++ + ++ I++D+VHER++ D L+ +K
Sbjct: 673 TTGVLLRMLQSSKKNGVLKNIGYILIDEVHERSVDADFLLILLKK 717
Score = 42 (19.8 bits), Expect = 6.8e-15, Sum P(5) = 6.8e-15
Identities = 7/10 (70%), Positives = 10/10 (100%)
Query: 837 LYIHPSSVLY 846
++IHPSSVL+
Sbjct: 1204 VFIHPSSVLF 1213
Score = 38 (18.4 bits), Expect = 1.9e-11, Sum P(4) = 1.9e-11
Identities = 17/70 (24%), Positives = 32/70 (45%)
Query: 386 LYPVSVY--YSNDPVVNYVQGVVDTAIKIHESMPVGDILAFVIGLEQIEHIIGILKQYHN 443
L P+ Y YS N + +V T + +H + ++ ++ + II + Y N
Sbjct: 107 LIPIKFYPNYSPKETTNEARHMVATFV-LHR-------INYIKNMKMLLPII--FRDYWN 156
Query: 444 QREDLKLLIL 453
+ ED +L +L
Sbjct: 157 ELEDERLKLL 166
>MGI|MGI:2147067 [details] [associations]
symbol:Dhx57 "DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR000571 InterPro:IPR001650
InterPro:IPR006575 InterPro:IPR007502 InterPro:IPR009060
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00642
Pfam:PF04408 Pfam:PF05773 PROSITE:PS00690 PROSITE:PS50103
PROSITE:PS51194 SMART:SM00356 SMART:SM00490 SMART:SM00847
MGI:MGI:2147067 GO:GO:0005524 GO:GO:0046872 GO:GO:0008270
GO:GO:0003676 InterPro:IPR015940 SMART:SM00165 PROSITE:PS50030
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 SUPFAM:SSF46934
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 CTD:90957 HOVERGEN:HBG080658 KO:K13026
OMA:RAYKGWQ OrthoDB:EOG4ZS929 EMBL:AK035344 EMBL:AK053628
EMBL:AK162192 EMBL:BC026474 EMBL:BC062952 EMBL:BC065169
EMBL:BC066091 IPI:IPI00420351 IPI:IPI00453609 IPI:IPI00752611
IPI:IPI00753147 IPI:IPI00755243 RefSeq:NP_001157231.1
RefSeq:NP_945180.2 UniGene:Mm.12412 ProteinModelPortal:Q6P5D3
SMR:Q6P5D3 PhosphoSite:Q6P5D3 PaxDb:Q6P5D3 PRIDE:Q6P5D3
Ensembl:ENSMUST00000038166 Ensembl:ENSMUST00000086555 GeneID:106794
KEGG:mmu:106794 UCSC:uc008dqx.2 UCSC:uc008dqy.2 UCSC:uc008dqz.2
UCSC:uc008dra.2 UCSC:uc008drb.1 InParanoid:Q6P5D3 NextBio:358388
Bgee:Q6P5D3 CleanEx:MM_DHX57 Genevestigator:Q6P5D3
GermOnline:ENSMUSG00000035051 Uniprot:Q6P5D3
Length = 1388
Score = 179 (68.1 bits), Expect = 8.1e-15, Sum P(5) = 8.1e-15
Identities = 51/178 (28%), Positives = 85/178 (47%)
Query: 402 VQGVVDTAIKIHESMPVGDILAFVIGLEQIEHIIGILKQ--YHNQREDLKLLILPMHGSL 459
++ +++ + + P G +L F+ GL +I+ + L+ N R + +I P+H SL
Sbjct: 833 IEALLEWIVDGKHAYPPGAVLVFLPGLAEIKMLYEQLQSNSLFNNRRSHRCVIHPLHSSL 892
Query: 460 PNNEQIKVFRPTPRAMRKIVIATNIAETSITIPGIVYVIDPGFVKARWFNPNTLTNSLVV 519
+ EQ VF P + KI+I+TNIAETSITI +VYVID G +K + ++ SL
Sbjct: 893 SSEEQQAVFVKPPMGVTKIIISTNIAETSITIDDVVYVIDSGKMKEKRYDAGKGMESLED 952
Query: 520 VPISKXXXXXXXXXXXXXXXX---HVYRKNFMYNRLFIHFCVSRNIPTIPNDPKDVKC 574
+S+ H++ + YN H + + +P I P + C
Sbjct: 953 TFVSQANALQRKGRAGRVASGVCFHLFTSHH-YN----HQLLKQQLPEIQRVPLEQLC 1005
Score = 178 (67.7 bits), Expect = 3.9e-10, Sum P(3) = 3.9e-10
Identities = 39/94 (41%), Positives = 60/94 (63%)
Query: 604 TEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTKIKYMTEGILMREMMTDP 663
T+PRRIS S+A RV++E +G TVGY IR + + T++ Y T G+L+R + D
Sbjct: 600 TQPRRISAISVAERVAKERAERVGLTVGYQIRLESVKSS-ATRLLYCTTGVLLRRLEGDA 658
Query: 664 LLRKYSVIMLDEVHERTIFTDILMGLLKKILKDK 697
L+ + I++DEVHERT +D L+ +LK I+ +
Sbjct: 659 TLQGVTHIIVDEVHERTEESDFLLLVLKDIVMQR 692
Score = 96 (38.9 bits), Expect = 0.00061, Sum P(4) = 0.00061
Identities = 38/114 (33%), Positives = 59/114 (51%)
Query: 47 LYTEASFS-QLNECTPPEMQRTELSSAVLQLKALGI---HNILR-FS-FPSPPPAQNLRV 100
L+T ++ QL + PE+QR L L++K L + HN+ FS PP +LR
Sbjct: 978 LFTSHHYNHQLLKQQLPEIQRVPLEQLCLRIKILEMFSTHNLQSVFSRLIEPPHIDSLRA 1037
Query: 101 ALELLYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLLSSGSV---LDSAVEI 151
+ L LGA+ + LT P+G +A +P+ K++L GS+ LD A+ I
Sbjct: 1038 SKVRLRDLGALTPDEKLT-PLGYHLASLPVDVRIGKLMLL-GSIFRCLDPALTI 1089
Score = 68 (29.0 bits), Expect = 8.1e-15, Sum P(5) = 8.1e-15
Identities = 24/95 (25%), Positives = 40/95 (42%)
Query: 701 FECSDEIASILSLLQVQDIFIKPSSGALSLKARVLRRNFEVEQGDLLTLLNIFKFYE--K 758
F C D +I + L + F+ P + L F D L LL +K ++
Sbjct: 1080 FRCLDPALTIAASLAFKSPFVSPWDKKEEANQKKLE--FAFANSDYLALLCAYKGWQLST 1137
Query: 759 QENKK---QFCHKYFFNYKVLKRAAELKNQMILLL 790
+E+ + +C + F + + L+ A LK Q LL
Sbjct: 1138 KESARASYNYCRQNFLSGRTLQEMASLKRQFTELL 1172
Score = 66 (28.3 bits), Expect = 8.1e-15, Sum P(5) = 8.1e-15
Identities = 13/37 (35%), Positives = 25/37 (67%)
Query: 2 TEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILM 38
T G+L+ + D +++ + I++D+VHERT +D L+
Sbjct: 646 TTGVLLRRLEGDATLQGVTHIIVDEVHERTEESDFLL 682
Score = 65 (27.9 bits), Expect = 8.1e-15, Sum P(5) = 8.1e-15
Identities = 16/59 (27%), Positives = 32/59 (54%)
Query: 346 LKRTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYYSNDP--VVNYV 402
++R L++I+ SAT+DA +++ S ++++ G +PV ++ D V YV
Sbjct: 690 MQRATLQVILMSATLDAGLFSKYF-----SYCPVITIPGRAFPVDQFFLEDALAVTRYV 743
Score = 43 (20.2 bits), Expect = 1.3e-07, Sum P(3) = 1.3e-07
Identities = 15/69 (21%), Positives = 32/69 (46%)
Query: 694 LKDKERDFECS-DEIASILSLLQVQDIFIKPSSGA--LSLKARVLRRNFEVEQGDLLTLL 750
L + R C + S LS + Q +F+KP G + + + + ++ D++ ++
Sbjct: 874 LFNNRRSHRCVIHPLHSSLSSEEQQAVFVKPPMGVTKIIISTNIAETSITID--DVVYVI 931
Query: 751 NIFKFYEKQ 759
+ K EK+
Sbjct: 932 DSGKMKEKR 940
Score = 39 (18.8 bits), Expect = 8.1e-15, Sum P(5) = 8.1e-15
Identities = 7/13 (53%), Positives = 11/13 (84%)
Query: 837 LYIHPSSVLYTLQ 849
++IHPSSV Y ++
Sbjct: 1264 VHIHPSSVNYQVR 1276
>UNIPROTKB|I3LG95 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 EMBL:CU929534
Ensembl:ENSSSCT00000030291 Uniprot:I3LG95
Length = 1370
Score = 179 (68.1 bits), Expect = 1.2e-08, Sum P(4) = 1.2e-08
Identities = 41/99 (41%), Positives = 62/99 (62%)
Query: 604 TEPRRISVTSLANRVSEELRTTLG-----HTVGYTIRFDDCTTEDVTKIKYMTEGILMRE 658
T+PRRIS SLA RV +EL G GY IR + +E T++ Y T G+L+R+
Sbjct: 625 TQPRRISAVSLATRVCDELGCENGPGGKNSLCGYQIRMESRASES-TRLLYCTTGVLLRK 683
Query: 659 MMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKILKDK 697
+ D LL S +++DEVHER++ +D L+ +LK+IL+ +
Sbjct: 684 LQEDGLLTNVSHVIVDEVHERSVQSDFLLIILKEILQKR 722
Score = 173 (66.0 bits), Expect = 8.3e-15, Sum P(5) = 8.3e-15
Identities = 46/156 (29%), Positives = 73/156 (46%)
Query: 419 GDILAFVIGLEQIEHIIGILKQYHNQREDLKLLILPMHGSLPNNEQIKVFRPTPRAMRKI 478
G +L F+ GL I+ + +L + + ++ +H L +Q F P+ +RKI
Sbjct: 868 GAVLIFLPGLAHIQQLYDLLSTDRRFFSE-RYKVIALHSILSTQDQAAAFTLPPQGVRKI 926
Query: 479 VIATNIAETSITIPGIVYVIDPGFVKARWFNPNTLTNSLVVVPISKXXXXXXXXXXXXXX 538
V+ATNIAET ITIP +V+VID G K ++ ++ +SLV +SK
Sbjct: 927 VLATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQGRAGRVR 986
Query: 539 XXHVYRKNFMYNRLFIHFCVSRNIPTIPNDPKDVKC 574
+R MY R + ++P I P + C
Sbjct: 987 DGFCFR---MYTRERFEGFMDYSVPEILRVPLEELC 1019
Score = 86 (35.3 bits), Expect = 8.3e-15, Sum P(5) = 8.3e-15
Identities = 19/50 (38%), Positives = 30/50 (60%)
Query: 347 KRTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYYSND 396
KR+ L LI+ SATVD+E+ ++ ++ IL + G YPV V++ D
Sbjct: 721 KRSDLHLILMSATVDSEKFSTYF-----THCPILRISGRSYPVEVFHLED 765
Score = 65 (27.9 bits), Expect = 8.3e-15, Sum P(5) = 8.3e-15
Identities = 12/37 (32%), Positives = 23/37 (62%)
Query: 2 TEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILM 38
T G+L+ D + S +++D+VHER++ +D L+
Sbjct: 676 TTGVLLRKLQEDGLLTNVSHVIVDEVHERSVQSDFLL 712
Score = 55 (24.4 bits), Expect = 8.3e-15, Sum P(5) = 8.3e-15
Identities = 21/89 (23%), Positives = 41/89 (46%)
Query: 701 FECSDEIASILSLLQVQDIFIKPSSGALSLKARVLRRNFEVEQGDLLTLLNIFKFYEK-- 758
F C D +A++ +++ + F P G +A + + + D LT+ N + ++K
Sbjct: 1092 FGCLDPVATLAAVMTEKSPFTTPI-GRKD-EADLAKSALAMADSDHLTIYNAYLGWKKAQ 1149
Query: 759 QE----NKKQFCHKYFFNYKVLKRAAELK 783
QE ++ +C + F N L E+K
Sbjct: 1150 QEGGYRSEIAYCRRNFLNRTSLLTLEEIK 1178
Score = 41 (19.5 bits), Expect = 1.2e-08, Sum P(4) = 1.2e-08
Identities = 9/27 (33%), Positives = 15/27 (55%)
Query: 421 ILAFVIGLEQIEHIIGILKQYHNQRED 447
IL VI + + IIG++ ++ Q D
Sbjct: 83 ILKVVINNKLEQKIIGVINEHKKQNND 109
Score = 40 (19.1 bits), Expect = 3.6e-07, Sum P(4) = 3.6e-07
Identities = 16/63 (25%), Positives = 29/63 (46%)
Query: 713 LLQVQDIFIKPSSGALSLKARVLRRNFEVEQGDLLTLLNIFKFYEKQENKKQFCHKYFFN 772
L + ++I I +S A +K + V+ G T ++ FY+K N+ Q Y
Sbjct: 785 LEEEEEITINVTSKAGGIKK--YQEYIPVQTG---TSADLNPFYQKYSNRTQHAILYMNP 839
Query: 773 YKV 775
+K+
Sbjct: 840 HKI 842
Score = 38 (18.4 bits), Expect = 8.3e-15, Sum P(5) = 8.3e-15
Identities = 17/55 (30%), Positives = 24/55 (43%)
Query: 806 AVLKC-LTNGFFSNAAYLHYSG----------VYRTVRGNEDLYIHPSSVLYTLQ 849
A+LK LT G + N + Y+ + T +G +HPSSV LQ
Sbjct: 1214 ALLKAVLTAGLYDNVGKIIYTKSVDVTEKLACIVETAQGKAQ--VHPSSVNRDLQ 1266
>UNIPROTKB|E2QTL7 [details] [associations]
symbol:DHX36 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
Ensembl:ENSCAFT00000013769 Uniprot:E2QTL7
Length = 988
Score = 160 (61.4 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 36/93 (38%), Positives = 55/93 (59%)
Query: 604 TEPRRISVTSLANRVSEELRTTLGH--TVGYTIRFDDCTTEDVTKIKYMTEGILMREMMT 661
T+PRRIS S+A RV+ E + G+ + GY IR I Y T GI+++ + +
Sbjct: 256 TQPRRISAISVAERVAAERAESCGNGNSTGYQIRLQSRLPRKQGSILYCTTGIILQWLQS 315
Query: 662 DPLLRKYSVIMLDEVHERTIFTDILMGLLKKIL 694
D L S I+LDE+HER + +D+LM ++K +L
Sbjct: 316 DSHLSSVSHIVLDEIHERNLQSDVLMTVIKDLL 348
Score = 149 (57.5 bits), Expect = 9.1e-15, Sum P(4) = 9.1e-15
Identities = 39/109 (35%), Positives = 52/109 (47%)
Query: 466 KVFRPTPRAMRKIVIATNIAETSITIPGIVYVIDPGFVKARWFNPNTLTNSLVVVPISKX 525
+VF+ TP +RKIVIATNIAETSITI +VYVID G +K F+ +++ +SK
Sbjct: 515 QVFKKTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKA 574
Query: 526 XXXXXXXXXXXXXXXHVYRKNFMYNRLFIHFCVSRNIPTIPNDPKDVKC 574
H Y +YN L +P I P + C
Sbjct: 575 NAKQRKGRAGRVQPGHCYH---LYNGLRASLLDDYQLPEILRTPLEELC 620
Score = 107 (42.7 bits), Expect = 1.3e-07, Sum P(3) = 1.3e-07
Identities = 30/95 (31%), Positives = 48/95 (50%)
Query: 47 LYTEASFSQLNECTPPEMQRTELSSAVLQLKALGIHNILRF--SFPSPPPAQNLRVALEL 104
LY S L++ PE+ RT L LQ+K L + I F PP + + ++++
Sbjct: 594 LYNGLRASLLDDYQLPEILRTPLEELCLQIKILRLGGIAYFLSRLMDPPSDEAVSLSIKH 653
Query: 105 LYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLL 139
L L A+D LT P+G +A +P+ P K++L
Sbjct: 654 LMELNALDKQEELT-PLGVHLARLPVEPHIGKMIL 687
Score = 80 (33.2 bits), Expect = 9.1e-15, Sum P(4) = 9.1e-15
Identities = 24/91 (26%), Positives = 43/91 (47%)
Query: 701 FECSDEIASILSLLQVQDIFIKPSSGALSLKARVLRRNFEVE-QGDLLTLLNIFKFYEKQ 759
F C D + +I + L +D F+ P AR R+ + + D LT++N F+ +E+
Sbjct: 692 FCCLDPVLTIAASLSFKDPFVIPLGKEKIADAR--RKELAKDTKSDHLTVVNAFEGWEEA 749
Query: 760 ENK-----KQFCHKYFFNYKVLKRAAELKNQ 785
+ K +C +YF + L+ +K Q
Sbjct: 750 RRRGFRYEKDYCWEYFLSSNTLQMLHNMKGQ 780
Score = 71 (30.1 bits), Expect = 9.1e-15, Sum P(4) = 9.1e-15
Identities = 14/37 (37%), Positives = 24/37 (64%)
Query: 2 TEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILM 38
T GI+++ D + S I+LD++HER + +D+LM
Sbjct: 305 TTGIILQWLQSDSHLSSVSHIVLDEIHERNLQSDVLM 341
Score = 70 (29.7 bits), Expect = 9.1e-15, Sum P(4) = 9.1e-15
Identities = 17/57 (29%), Positives = 31/57 (54%)
Query: 348 RTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYYSNDPV--VNYV 402
R LK+I+ SAT++AE+ +++ N ++ + G +PV Y D + + YV
Sbjct: 351 RPDLKVILMSATLNAEKFSEYFG-----NCPMIHIPGFTFPVVEYLLEDIIEKIRYV 402
Score = 38 (18.4 bits), Expect = 1.0e-08, Sum P(3) = 1.0e-08
Identities = 7/24 (29%), Positives = 16/24 (66%)
Query: 430 QIEHIIGILKQYHNQREDLKLLIL 453
Q + ++ ++K N R DLK++++
Sbjct: 336 QSDVLMTVIKDLLNFRPDLKVILM 359
>UNIPROTKB|G4MR96 [details] [associations]
symbol:MGG_04709 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
EMBL:CM001231 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 RefSeq:XP_003710833.1
EnsemblFungi:MGG_04709T0 GeneID:2677908 KEGG:mgr:MGG_04709
Uniprot:G4MR96
Length = 1504
Score = 183 (69.5 bits), Expect = 5.0e-14, Sum P(2) = 5.0e-14
Identities = 47/105 (44%), Positives = 69/105 (65%)
Query: 604 TEPRRISVTSLANRVSEEL---RTTLGHT---VGYTIRFDDCTTEDVTKIKYMTEGILMR 657
TEPRRIS SLA RVSEEL R LG + VGY+IR + T+ + T++ + T GI+MR
Sbjct: 744 TEPRRISAISLARRVSEELGEGRNDLGTSRSLVGYSIRLEANTSRE-TRLVFATTGIVMR 802
Query: 658 EMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKILKDKERDFE 702
+ LR + ++LDEVHER+I +D L+ +LKK++ + +D +
Sbjct: 803 MLEGSNDLRDITHLVLDEVHERSIDSDFLLIVLKKLMT-RRKDLK 846
Score = 148 (57.2 bits), Expect = 9.8e-15, Sum P(4) = 9.8e-15
Identities = 37/104 (35%), Positives = 57/104 (54%)
Query: 421 ILAFVIGLEQIEHIIGILKQYHNQREDLKLLILPMHGSLPNNEQIKVFRPTPRAMRKIVI 480
IL F+ G+ +I + +L + +++ L+ P+H ++ EQ F P MRKIV+
Sbjct: 970 ILVFLPGIAEIRTLNDLLLGDRSFQQNW--LVYPLHSTIATEEQEAAFLVPPHGMRKIVL 1027
Query: 481 ATNIAETSITIPGIVYVIDPGFVKARWFNPNTLTNSLVVVPISK 524
ATNIAET ITIP + VID G + F+ + L+ IS+
Sbjct: 1028 ATNIAETGITIPDVTCVIDTGKHREMRFDERRQMSRLIDTFISR 1071
Score = 101 (40.6 bits), Expect = 2.6e-06, Sum P(3) = 2.6e-06
Identities = 31/96 (32%), Positives = 50/96 (52%)
Query: 62 PEMQRTELSSAVLQLKAL---GIHNILRFSFPSPPPAQNLRVALELLYSLGAMDVNGNLT 118
PEM R L +++K GI L + PP A+N+R A++ L + A+ +LT
Sbjct: 1108 PEMLRLSLQDLAIRVKICKIGGIEETLSKAL-DPPSAKNIRRAIDALIDVRALTQGEDLT 1166
Query: 119 KPVGETMAEMPLHPIHAKVLLSSGSV---LDSAVEI 151
P+G +A +PL K++L GS+ LD A+ +
Sbjct: 1167 -PLGNQLARLPLDVFLGKLILL-GSIFKCLDMAITV 1200
Score = 93 (37.8 bits), Expect = 9.8e-15, Sum P(4) = 9.8e-15
Identities = 28/113 (24%), Positives = 51/113 (45%)
Query: 701 FECSDEIASILSLLQVQDIFIKPSSGALSLKARVLRRNFEVEQGDLLTLLNIFKFYEK-- 758
F+C D ++ ++L + F+ P G S +A +R F D+LT+ N + +++
Sbjct: 1191 FKCLDMAITVAAILSSKSPFVAPF-GQRS-QADTVRLGFRRGDSDILTVYNAYLSWKRVC 1248
Query: 759 ------QENKKQFCHKYFFNYKVLKRAAELKNQMILLLKKSSIPLVTSPRNTN 805
+ QFC K F + + L +LK Q+++ L S +T N
Sbjct: 1249 LAATGNSSQEFQFCRKNFLSQQTLANIEDLKGQLLVSLVDSKFLSMTEDERKN 1301
Score = 80 (33.2 bits), Expect = 9.8e-15, Sum P(4) = 9.8e-15
Identities = 21/58 (36%), Positives = 32/58 (55%)
Query: 343 LKPL--KRTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYYSNDPV 398
LK L +R LK+++ SATVDA+ + + A +L+V G +PV V + D V
Sbjct: 835 LKKLMTRRKDLKVVLMSATVDADRFSNYLD-----GAPVLNVPGRTFPVQVNFLEDAV 887
Score = 57 (25.1 bits), Expect = 9.8e-15, Sum P(4) = 9.8e-15
Identities = 13/42 (30%), Positives = 25/42 (59%)
Query: 2 TEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILMECSRK 43
T GI++ + + + ++LD+VHER+I +D L+ +K
Sbjct: 796 TTGIVMRMLEGSNDLRDITHLVLDEVHERSIDSDFLLIVLKK 837
>UNIPROTKB|Q68FK8 [details] [associations]
symbol:dhx9 "ATP-dependent RNA helicase A-like protein"
species:8355 "Xenopus laevis" [GO:0070937 "CRD-mediated mRNA
stability complex" evidence=ISS] InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00358 SMART:SM00490 SMART:SM00847 InterPro:IPR014720
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 Gene3D:3.30.160.20
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 CTD:1660
HOVERGEN:HBG039429 KO:K13184 GO:GO:0070937 EMBL:BC079701
RefSeq:NP_001087383.1 UniGene:Xl.55621 ProteinModelPortal:Q68FK8
SMR:Q68FK8 PRIDE:Q68FK8 GeneID:447207 KEGG:xla:447207
Xenbase:XB-GENE-967780 Uniprot:Q68FK8
Length = 1262
Score = 166 (63.5 bits), Expect = 1.1e-14, Sum P(4) = 1.1e-14
Identities = 43/117 (36%), Positives = 65/117 (55%)
Query: 405 VVDTAIKIHESMPV-GDILAFVIGLEQIEHIIGILKQYHNQREDLKLLILPMHGSLPNNE 463
+++ +K E++ V G +L F+ G I + L+ + ILP+H +P +E
Sbjct: 638 LIEALLKYIETLNVPGAVLVFLPGWNLIYAMQKHLEMNPHFGSH-SYCILPLHSQIPRDE 696
Query: 464 QIKVFRPTPRAMRKIVIATNIAETSITIPGIVYVIDPGFVKARWFNP-NTLTNSLVV 519
Q KVF P P + K++++TNIAETSITI +VYVID K + F N +TN V
Sbjct: 697 QRKVFDPVPDGIIKVILSTNIAETSITINDVVYVIDSCKQKVKLFTSHNNMTNYATV 753
Score = 163 (62.4 bits), Expect = 8.4e-10, Sum P(2) = 8.4e-10
Identities = 33/95 (34%), Positives = 60/95 (63%)
Query: 601 IGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTKIKYMTEGILMREMM 660
I +T+PRRIS S+A RV+ E +G + GY++RF+ + + T G+L+R++
Sbjct: 442 IVVTQPRRISAVSVAERVAFERGEEIGKSCGYSVRFESVLPRPHASMLFCTVGVLLRKLE 501
Query: 661 TDPLLRKYSVIMLDEVHERTIFTDILMGLLKKILK 695
+ +R S +++DE+HER I TD L+ +L+ +++
Sbjct: 502 SG--IRGISHVIVDEIHERDINTDFLLVVLRDVIQ 534
Score = 113 (44.8 bits), Expect = 8.4e-06, Sum P(3) = 8.4e-06
Identities = 31/95 (32%), Positives = 48/95 (50%)
Query: 47 LYTEASFSQLNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPS--PPPAQNLRVALEL 104
L ++A F +L PE+ RT L L +K L + I F + PPP + A
Sbjct: 778 LCSKARFDKLETHLTPEIFRTPLHEVALSIKLLRLGGIGHFLSKAIEPPPLDAVIEAEHT 837
Query: 105 LYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLL 139
L L A+D N LT P+G +A++P+ P K+++
Sbjct: 838 LRELDALDSNDELT-PLGRILAKLPIEPRLGKMMI 871
Score = 77 (32.2 bits), Expect = 1.1e-14, Sum P(4) = 1.1e-14
Identities = 15/47 (31%), Positives = 26/47 (55%)
Query: 350 QLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYYSND 396
++++I+ SAT+D C+++ N I+ V G +PV YY D
Sbjct: 538 EIRVILMSATIDTSMFCEYF-----FNCPIIEVFGRTFPVQEYYLED 579
Score = 71 (30.1 bits), Expect = 1.1e-14, Sum P(4) = 1.1e-14
Identities = 33/126 (26%), Positives = 53/126 (42%)
Query: 735 LRRNFEVEQ-GDLLTLLNIFKFYEK-----QENKKQFCHKYFFNYKVLKRAAELKNQMIL 788
+ RNF + D + LL++F+ ++ ++ + +FC N L+ E K Q+
Sbjct: 905 VHRNFAGNRFSDHVALLSVFQAWDDARMGGEDAETRFCEHKRLNMATLRMTWEAKVQLKD 964
Query: 789 LLKKSSIP---LV------TSP-RNTNAVLKCLTNGFFSNAAYLHYSGVYRTVRGNEDLY 838
+L + P L+ T P N + V+ L G + N Y T G L
Sbjct: 965 ILVNAGFPEECLMNQVFNNTGPDNNLDVVISLLAFGVYPNVCYHKEKRKILTTEGRNAL- 1023
Query: 839 IHPSSV 844
IH SSV
Sbjct: 1024 IHKSSV 1029
Score = 59 (25.8 bits), Expect = 1.1e-14, Sum P(4) = 1.1e-14
Identities = 14/49 (28%), Positives = 26/49 (53%)
Query: 2 TEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILMECSRKFSRLYTE 50
T G+L+ + + S +++D++HER I TD L+ R + + E
Sbjct: 492 TVGVLLRK--LESGIRGISHVIVDEIHERDINTDFLLVVLRDVIQAFPE 538
WARNING: HSPs involving 68 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.323 0.138 0.406 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 858 842 0.00081 122 3 11 22 0.49 33
37 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 318
No. of states in DFA: 617 (66 KB)
Total size of DFA: 383 KB (2187 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 77.89u 0.09s 77.98t Elapsed: 00:00:33
Total cpu time: 78.01u 0.09s 78.10t Elapsed: 00:00:33
Start: Thu Aug 15 11:37:10 2013 End: Thu Aug 15 11:37:43 2013
WARNINGS ISSUED: 2