Query psy2472
Match_columns 571
No_of_seqs 128 out of 229
Neff 6.9
Searched_HMMs 29240
Date Fri Aug 16 17:10:01 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy2472.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/2472hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3rau_A Tyrosine-protein phosph 87.4 2.5 8.7E-05 43.8 10.4 97 390-489 211-309 (363)
2 3c3r_A Programmed cell death 6 84.8 3.7 0.00013 42.8 10.1 74 389-467 239-312 (380)
3 1zb1_A BRO1 protein; AIP1, BRO 84.6 5.9 0.0002 41.3 11.6 76 390-467 217-294 (392)
4 3r9m_A BRO1 domain-containing 77.6 5.2 0.00018 41.6 8.1 72 390-465 217-288 (376)
5 2xs1_A Programmed cell death 6 75.8 11 0.00038 42.5 10.7 74 389-467 224-297 (704)
6 2rpa_A Katanin P60 ATPase-cont 70.2 17 0.00059 29.0 7.6 59 434-496 16-74 (78)
7 3qwp_A SET and MYND domain-con 60.0 41 0.0014 35.2 10.5 36 430-465 371-406 (429)
8 2v6y_A AAA family ATPase, P60 56.7 42 0.0014 26.8 7.7 39 429-467 10-48 (83)
9 3qww_A SET and MYND domain-con 56.1 1.9E+02 0.0067 30.0 15.3 63 387-465 355-417 (433)
10 2w2u_A Hypothetical P60 katani 52.6 49 0.0017 26.5 7.4 38 430-467 19-56 (83)
11 3ro3_A PINS homolog, G-protein 51.1 28 0.00097 28.5 6.2 61 128-193 101-161 (164)
12 3ro3_A PINS homolog, G-protein 49.7 45 0.0015 27.2 7.3 61 129-194 22-82 (164)
13 4a5x_A MITD1, MIT domain-conta 48.2 71 0.0024 25.7 7.8 33 435-467 21-53 (86)
14 3gw4_A Uncharacterized protein 44.2 58 0.002 28.3 7.5 64 128-196 119-182 (203)
15 2hr2_A Hypothetical protein; a 44.1 79 0.0027 28.5 8.2 64 386-462 71-134 (159)
16 1wfd_A Hypothetical protein 15 43.4 90 0.0031 25.4 7.8 38 430-467 15-52 (93)
17 3ma5_A Tetratricopeptide repea 41.7 30 0.001 27.4 4.6 28 434-461 45-72 (100)
18 2v5f_A Prolyl 4-hydroxylase su 39.7 32 0.0011 27.8 4.6 32 430-461 5-36 (104)
19 4ga2_A E3 SUMO-protein ligase 39.2 29 0.001 29.8 4.5 29 431-459 32-60 (150)
20 4gcn_A Protein STI-1; structur 37.9 65 0.0022 26.6 6.4 57 128-188 54-110 (127)
21 2v6x_A Vacuolar protein sortin 37.7 1.2E+02 0.0041 24.0 7.5 33 435-467 18-50 (85)
22 3ma5_A Tetratricopeptide repea 37.4 32 0.0011 27.2 4.1 26 434-459 11-36 (100)
23 3qww_A SET and MYND domain-con 37.2 60 0.0021 34.0 7.3 62 387-465 313-375 (433)
24 1na3_A Designed protein CTPR2; 37.1 36 0.0012 25.3 4.2 27 433-459 12-38 (91)
25 3n71_A Histone lysine methyltr 34.5 2.6E+02 0.0089 29.6 11.9 62 387-465 324-386 (490)
26 2kc7_A BFR218_protein; tetratr 34.3 37 0.0013 26.1 4.0 26 434-459 39-64 (99)
27 2dl1_A Spartin; SPG20, MIT, st 34.1 2.2E+02 0.0076 24.3 9.5 72 423-496 15-89 (116)
28 2hr2_A Hypothetical protein; a 33.7 86 0.0029 28.2 6.7 33 159-191 9-41 (159)
29 3gw4_A Uncharacterized protein 33.2 1.3E+02 0.0045 25.9 8.0 62 128-193 78-139 (203)
30 3u3w_A Transcriptional activat 32.4 1.9E+02 0.0066 27.2 9.7 31 433-463 157-188 (293)
31 3k9i_A BH0479 protein; putativ 32.3 42 0.0014 27.1 4.1 26 434-459 31-56 (117)
32 3vtx_A MAMA; tetratricopeptide 31.1 39 0.0013 29.3 4.0 25 435-459 10-34 (184)
33 3n71_A Histone lysine methyltr 30.7 5E+02 0.017 27.3 16.4 63 387-465 366-428 (490)
34 1na3_A Designed protein CTPR2; 30.4 54 0.0019 24.3 4.2 26 434-459 47-72 (91)
35 2l6j_A TPR repeat-containing p 30.2 59 0.002 25.1 4.6 24 435-458 9-32 (111)
36 2cpt_A SKD1 protein, vacuolar 29.4 2.4E+02 0.0082 23.9 8.5 32 435-466 23-54 (117)
37 2kat_A Uncharacterized protein 28.5 53 0.0018 26.1 4.1 26 434-459 23-48 (115)
38 3k9i_A BH0479 protein; putativ 28.5 50 0.0017 26.5 4.0 26 434-459 65-90 (117)
39 2kck_A TPR repeat; tetratricop 28.1 56 0.0019 24.9 4.1 26 434-459 44-69 (112)
40 2l6j_A TPR repeat-containing p 27.7 45 0.0015 25.8 3.4 25 434-458 42-66 (111)
41 2crb_A Nuclear receptor bindin 27.2 67 0.0023 26.5 4.2 32 436-467 21-52 (97)
42 2kat_A Uncharacterized protein 27.0 67 0.0023 25.5 4.4 28 434-461 57-84 (115)
43 1elr_A TPR2A-domain of HOP; HO 26.6 2E+02 0.0068 22.2 7.4 58 129-190 51-108 (131)
44 3upv_A Heat shock protein STI1 26.3 78 0.0027 25.4 4.8 25 435-459 43-67 (126)
45 2v5f_A Prolyl 4-hydroxylase su 26.2 1.2E+02 0.0043 24.1 6.0 26 434-459 50-75 (104)
46 1hxi_A PEX5, peroxisome target 26.2 61 0.0021 26.6 4.1 26 434-459 55-80 (121)
47 2xev_A YBGF; tetratricopeptide 26.1 62 0.0021 25.8 4.1 26 434-459 43-68 (129)
48 2kc7_A BFR218_protein; tetratr 25.7 1.6E+02 0.0055 22.1 6.5 53 128-190 12-64 (99)
49 3qky_A Outer membrane assembly 25.4 3.1E+02 0.01 25.0 9.5 28 432-459 150-177 (261)
50 3qwp_A SET and MYND domain-con 25.1 1.2E+02 0.0042 31.5 7.1 31 435-465 334-364 (429)
51 3q15_A PSP28, response regulat 24.8 1.8E+02 0.006 28.6 8.0 31 434-464 340-370 (378)
52 2xcb_A PCRH, regulatory protei 24.8 65 0.0022 26.9 4.1 25 435-459 57-81 (142)
53 2xze_A STAM-binding protein; h 24.7 3.5E+02 0.012 23.8 9.0 43 425-467 34-77 (146)
54 3vtx_A MAMA; tetratricopeptide 24.6 59 0.002 28.0 3.9 26 434-459 145-170 (184)
55 2vgx_A Chaperone SYCD; alterna 24.0 67 0.0023 27.4 4.1 28 434-461 93-120 (148)
56 3rkv_A Putative peptidylprolyl 24.0 1.2E+02 0.0042 25.6 5.8 67 387-459 26-92 (162)
57 3upv_A Heat shock protein STI1 23.9 72 0.0024 25.6 4.1 28 434-461 76-103 (126)
58 3gyz_A Chaperone protein IPGC; 23.8 67 0.0023 28.0 4.1 25 435-459 75-99 (151)
59 4gco_A Protein STI-1; structur 23.8 71 0.0024 26.4 4.1 26 434-459 85-110 (126)
60 4gcn_A Protein STI-1; structur 23.7 1E+02 0.0035 25.3 5.1 24 435-458 88-111 (127)
61 3gyz_A Chaperone protein IPGC; 23.7 68 0.0023 28.0 4.1 26 434-459 108-133 (151)
62 2vgx_A Chaperone SYCD; alterna 23.6 69 0.0024 27.3 4.1 26 434-459 59-84 (148)
63 2xcb_A PCRH, regulatory protei 23.3 72 0.0025 26.6 4.1 28 434-461 90-117 (142)
64 1elr_A TPR2A-domain of HOP; HO 23.3 98 0.0033 24.1 4.8 28 434-461 42-69 (131)
65 1na0_A Designed protein CTPR3; 23.1 83 0.0028 24.3 4.2 24 435-458 14-37 (125)
66 3sz7_A HSC70 cochaperone (SGT) 22.8 1.3E+02 0.0043 25.6 5.7 55 126-191 55-109 (164)
67 3edt_B KLC 2, kinesin light ch 22.7 3.2E+02 0.011 24.4 8.9 67 128-197 55-121 (283)
68 3q49_B STIP1 homology and U bo 22.5 2.3E+02 0.0078 22.5 7.1 29 434-462 81-109 (137)
69 3r9m_A BRO1 domain-containing 22.2 5.2E+02 0.018 26.2 11.1 70 123-194 205-286 (376)
70 2fbn_A 70 kDa peptidylprolyl i 21.9 1.4E+02 0.0048 26.2 6.0 26 434-459 92-117 (198)
71 1a17_A Serine/threonine protei 21.5 2.9E+02 0.01 22.5 7.8 55 130-193 95-149 (166)
72 2lni_A Stress-induced-phosphop 21.2 93 0.0032 24.5 4.2 26 434-459 88-113 (133)
73 2vyi_A SGTA protein; chaperone 21.1 95 0.0032 24.1 4.2 26 434-459 84-109 (131)
74 3bee_A Putative YFRE protein; 20.9 60 0.0021 26.0 2.9 26 162-187 44-69 (93)
75 4g1t_A Interferon-induced prot 20.6 77 0.0026 32.0 4.4 66 128-195 63-128 (472)
76 1na0_A Designed protein CTPR3; 20.4 1E+02 0.0035 23.7 4.2 26 434-459 47-72 (125)
No 1
>3rau_A Tyrosine-protein phosphatase non-receptor type 23; BRO1 domain, hydrolase; 1.95A {Homo sapiens}
Probab=87.37 E-value=2.5 Score=43.78 Aligned_cols=97 Identities=14% Similarity=0.202 Sum_probs=68.7
Q ss_pred hHHHHHHHHHHHHHHHhh--ccCCCCchHHHHHHHHHHHHHHhHhHHHHHHHHHHcCChHHHHHHHHHHHHHHHhhhccC
Q psy2472 390 DLVRLYEIILQNLGELQQ--LSGMEDDAQYQESVEVRTKTYKAFRCFYIAESLAALRRWRDCVALYSRATAYASDAASSL 467 (571)
Q Consensus 390 eivrLyd~ilq~l~ei~e--Lpgv~~D~~l~~~le~~~~~~~A~rc~~lA~~y~~~~k~~EAlaL~~ra~~~~~~a~~~~ 467 (571)
+...+|+.....+..... +.| .-+.++..-+..+..+|+|.=+|+.|......+|+-||++-++.|...+.++.+..
T Consensus 211 q~~~~Y~~a~~~l~~~~~~~~~~-~~~~~w~~~v~~K~~~~~A~A~y~~a~~~~e~~k~GeaIa~L~~A~~~l~~a~~~~ 289 (363)
T 3rau_A 211 QVVDYYKEACRALENPDTASLLG-RIQKDWKKLVQMKIYYFAAVAHLHMGKQAEEQQKFGERVAYFQSALDKLNEAIKLA 289 (363)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHT-THHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhcCccccccc-cccHHHHHHHHHHHHHHHHHHHHHHHHhHHHhhhHHHHHHHHHHHHHHHHHHHHHh
Confidence 355566666555543210 111 12578899999999999999999999999999999999999999999999998754
Q ss_pred CCCCCccchHHHHHHHHHHHhh
Q psy2472 468 PSSGELATLKPELATLEAAIDS 489 (571)
Q Consensus 468 ~~~~~~~~l~~~l~~L~~~i~~ 489 (571)
... +..+...+..+.+.|+.
T Consensus 290 -k~~-~~~~~~~~~~~~~~i~~ 309 (363)
T 3rau_A 290 -KGQ-PDTVQDALRFTMDVIGG 309 (363)
T ss_dssp -TTC-CHHHHHHHHHHHHHHHH
T ss_pred -cCC-chhHHHHHHHHHHHHHH
Confidence 322 33444445555444444
No 2
>3c3r_A Programmed cell death 6-interacting protein; ALIX BRO1 CHMP4C amphipathic-helix, apoptosis, HOST-virus interaction, protein transport, transport; 2.02A {Homo sapiens} PDB: 2oew_A 3c3o_A 3c3q_A
Probab=84.84 E-value=3.7 Score=42.82 Aligned_cols=74 Identities=7% Similarity=0.018 Sum_probs=60.5
Q ss_pred hhHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHhHhHHHHHHHHHHcCChHHHHHHHHHHHHHHHhhhccC
Q psy2472 389 QDLVRLYEIILQNLGELQQLSGMEDDAQYQESVEVRTKTYKAFRCFYIAESLAALRRWRDCVALYSRATAYASDAASSL 467 (571)
Q Consensus 389 ~eivrLyd~ilq~l~ei~eLpgv~~D~~l~~~le~~~~~~~A~rc~~lA~~y~~~~k~~EAlaL~~ra~~~~~~a~~~~ 467 (571)
.+...+|+.....+. +.+ .-+..+..-+..+..+|+|.=+|+.|......+|+.||++.++.|...+.++.+..
T Consensus 239 ~~~~~~Y~~A~~~l~----~~~-~~~~~w~~~v~~K~~~~~A~A~y~~a~~~~e~~k~GeaIa~L~~A~~~l~~a~~~~ 312 (380)
T 3c3r_A 239 NQAADYFGDAFKQCQ----YKD-TLPKEVFPVLAAKHCIMQANAEYHQSILAKQQKKFGEEIARLQHAAELIKTVASRY 312 (380)
T ss_dssp HHHHHHHHHHHHHHT----TCC-CSCTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHc----ccc-cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHh
Confidence 345566777666655 211 12368999999999999999999999999999999999999999999999988755
No 3
>1zb1_A BRO1 protein; AIP1, BRO1 domain, SNF7, trafficking, protein transport; 1.95A {Saccharomyces cerevisiae}
Probab=84.63 E-value=5.9 Score=41.33 Aligned_cols=76 Identities=12% Similarity=0.223 Sum_probs=62.0
Q ss_pred hHHHHHHHHHHHHHHHhhccCC--CCchHHHHHHHHHHHHHHhHhHHHHHHHHHHcCChHHHHHHHHHHHHHHHhhhccC
Q psy2472 390 DLVRLYEIILQNLGELQQLSGM--EDDAQYQESVEVRTKTYKAFRCFYIAESLAALRRWRDCVALYSRATAYASDAASSL 467 (571)
Q Consensus 390 eivrLyd~ilq~l~ei~eLpgv--~~D~~l~~~le~~~~~~~A~rc~~lA~~y~~~~k~~EAlaL~~ra~~~~~~a~~~~ 467 (571)
+...+|+.....+..... ++ .-+..|..-+..+..+|+|.=+|+.|......+|+-||++.++.|.+.+.++.+..
T Consensus 217 ~~~~~Y~~a~~~l~~~~~--~~~~~~~~~w~~~v~~K~~~~~A~A~y~~a~~~~e~~k~GeaIa~L~~A~~~l~~a~~~~ 294 (392)
T 1zb1_A 217 ATCNLFQKCHDFMKEIDD--DVAIYGEPKWKTTVTCKLHFYKSLSAYYHGLHLEEENRVGEAIAFLDFSMQQLISSLPFK 294 (392)
T ss_dssp HHHHHHHHHHHHHHSCCC--TTTSSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTHHHHHHHHHHHHHHHHGGGC
T ss_pred HHHHHHHHHHHHHhhccc--cccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHhh
Confidence 455667777666654320 11 23689999999999999999999999999999999999999999999999988754
No 4
>3r9m_A BRO1 domain-containing protein BROX; protein binding; 1.95A {Homo sapiens} PDB: 3um3_A 3zxp_A 3um2_A 3um1_A 3uly_A 3um0_A
Probab=77.60 E-value=5.2 Score=41.60 Aligned_cols=72 Identities=17% Similarity=0.310 Sum_probs=57.4
Q ss_pred hHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHhHhHHHHHHHHHHcCChHHHHHHHHHHHHHHHhhhc
Q psy2472 390 DLVRLYEIILQNLGELQQLSGMEDDAQYQESVEVRTKTYKAFRCFYIAESLAALRRWRDCVALYSRATAYASDAAS 465 (571)
Q Consensus 390 eivrLyd~ilq~l~ei~eLpgv~~D~~l~~~le~~~~~~~A~rc~~lA~~y~~~~k~~EAlaL~~ra~~~~~~a~~ 465 (571)
+...+|+.....+..+. ++| +..+...+..+..||+|.=+|+.|......+|+-||++-++.|.+.+.++.+
T Consensus 217 q~~~~Y~~a~~~l~~~~--~~i--~~~W~~~v~~K~~~~~A~A~y~~a~~~~~~~k~GeaIa~L~~A~~~l~~a~~ 288 (376)
T 3r9m_A 217 ETANFYQKADHTLSSLE--PAY--SAKWRKYLHLKMCFYTAYAYCYHGETLLASDKCGEAIRSLQEAEKLYAKAEA 288 (376)
T ss_dssp HHHHHHHHHHHHHTTSC--HHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcc--ccc--cHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHH
Confidence 34456665555554321 112 4568889999999999999999999999999999999999999999998875
No 5
>2xs1_A Programmed cell death 6-interacting protein; protein transport-viral protein complex, cell cycle; 2.30A {Homo sapiens} PDB: 2xs8_A 2oev_A 2r05_A 2r02_A 2r03_A 2oex_A 2ojq_A
Probab=75.83 E-value=11 Score=42.48 Aligned_cols=74 Identities=7% Similarity=-0.019 Sum_probs=60.6
Q ss_pred hhHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHhHhHHHHHHHHHHcCChHHHHHHHHHHHHHHHhhhccC
Q psy2472 389 QDLVRLYEIILQNLGELQQLSGMEDDAQYQESVEVRTKTYKAFRCFYIAESLAALRRWRDCVALYSRATAYASDAASSL 467 (571)
Q Consensus 389 ~eivrLyd~ilq~l~ei~eLpgv~~D~~l~~~le~~~~~~~A~rc~~lA~~y~~~~k~~EAlaL~~ra~~~~~~a~~~~ 467 (571)
.+...+|+.....+. +. .. -+..|..-+..+..+|+|.=|||.|......+||.||++.+..|...+.++.+..
T Consensus 224 ~~~~~~Y~~A~~~l~-~~--~~--~~~~w~~~v~~K~~~~~A~A~y~~a~~~~e~~k~GeaIa~L~~A~~~l~~a~~~~ 297 (704)
T 2xs1_A 224 NQAADYFGDAFKQCQ-YK--DT--LPKEVFPVLAAKHCIMQANAEYHQSILAKQQYYFGEEIARLQHAAELIKTVASRY 297 (704)
T ss_dssp HHHHHHHHHHHHHHH-TC--CC--SCTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHc-cc--cc--ccHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhHHHHHHHHHHHHHHHHHHHHHHh
Confidence 345566777766665 21 11 2468999999999999999999999999999999999999999999999888754
No 6
>2rpa_A Katanin P60 ATPase-containing subunit A1; AAA ATPase, ATP-binding, cell cycle, cell division, cytoplas hydrolase, microtubule; NMR {Mus musculus}
Probab=70.16 E-value=17 Score=29.03 Aligned_cols=59 Identities=12% Similarity=0.115 Sum_probs=43.4
Q ss_pred HHHHHHHHHcCChHHHHHHHHHHHHHHHhhhccCCCCCCccchHHHHHHHHHHHhhhHHHHHH
Q psy2472 434 FYIAESLAALRRWRDCVALYSRATAYASDAASSLPSSGELATLKPELATLEAAIDSNKYSALA 496 (571)
Q Consensus 434 ~~lA~~y~~~~k~~EAlaL~~ra~~~~~~a~~~~~~~~~~~~l~~~l~~L~~~i~~~~~~~~A 496 (571)
..+|+-|+..|+|..|+..|+.+.+.+..-...+ . ++.....=..++.+|......++.
T Consensus 16 ~k~ARe~Al~GnYdta~~yY~g~~~qI~k~l~~~-~---d~~~r~kW~~~~~ei~~E~~~Vk~ 74 (78)
T 2rpa_A 16 VKLAREYALLGNYDSAMVYYQGVLDQMNKYLYSV-K---DTHLRQKWQQVWQEINVEAKQVKD 74 (78)
T ss_dssp HHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHTC-S---CHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHhc-C---CHHHHHhHHHHHHHHHHHHHHHHH
Confidence 4689999999999999999999999999766655 2 223335555666666666555554
No 7
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=60.00 E-value=41 Score=35.17 Aligned_cols=36 Identities=3% Similarity=-0.072 Sum_probs=31.2
Q ss_pred hHhHHHHHHHHHHcCChHHHHHHHHHHHHHHHhhhc
Q psy2472 430 AFRCFYIAESLAALRRWRDCVALYSRATAYASDAAS 465 (571)
Q Consensus 430 A~rc~~lA~~y~~~~k~~EAlaL~~ra~~~~~~a~~ 465 (571)
|.-.+.||.+|...|+|.||+.+|.+|+.....+..
T Consensus 371 a~~l~nLa~~~~~~g~~~eA~~~~~~Al~i~~~~lG 406 (429)
T 3qwp_A 371 GVQVMKVGKLQLHQGMFPQAMKNLRLAFDIMRVTHG 406 (429)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcC
Confidence 344458999999999999999999999999997764
No 8
>2v6y_A AAA family ATPase, P60 katanin; MIT, VPS4, archaea, AAA-ATPase, ATP-binding, microtubule INT and trafficking domain, nucleotide-binding; HET: SRT; 2.40A {Sulfolobus solfataricus} PDB: 2v6y_B*
Probab=56.70 E-value=42 Score=26.83 Aligned_cols=39 Identities=15% Similarity=0.110 Sum_probs=32.8
Q ss_pred HhHhHHHHHHHHHHcCChHHHHHHHHHHHHHHHhhhccC
Q psy2472 429 KAFRCFYIAESLAALRRWRDCVALYSRATAYASDAASSL 467 (571)
Q Consensus 429 ~A~rc~~lA~~y~~~~k~~EAlaL~~ra~~~~~~a~~~~ 467 (571)
+|.....-|--.-..|+|.||+.||..|.+.+..+.+.-
T Consensus 10 ~Ai~lv~~Ave~D~~g~y~eAl~lY~~aie~l~~~lk~e 48 (83)
T 2v6y_A 10 MARKYAILAVKADKEGKVEDAITYYKKAIEVLSQIIVLY 48 (83)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHC
Confidence 556666677777889999999999999999999988754
No 9
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=56.05 E-value=1.9e+02 Score=30.05 Aligned_cols=63 Identities=8% Similarity=-0.022 Sum_probs=47.9
Q ss_pred CchhHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHhHhHHHHHHHHHHcCChHHHHHHHHHHHHHHHhhhc
Q psy2472 387 RPQDLVRLYEIILQNLGELQQLSGMEDDAQYQESVEVRTKTYKAFRCFYIAESLAALRRWRDCVALYSRATAYASDAAS 465 (571)
Q Consensus 387 k~~eivrLyd~ilq~l~ei~eLpgv~~D~~l~~~le~~~~~~~A~rc~~lA~~y~~~~k~~EAlaL~~ra~~~~~~a~~ 465 (571)
++.+=..+|.-.|...+.+ ++ .+.++... --..||.+|...|+|.||..+|.+|+.....+..
T Consensus 355 ~~~eA~~~~~~aL~i~~~~--lG--~~Hp~~a~------------~l~nLa~~~~~qg~~~eA~~~~~~Al~i~~~~lG 417 (433)
T 3qww_A 355 DWEGALKYGQKIIKPYSKH--YP--VYSLNVAS------------MWLKLGRLYMGLENKAAGEKALKKAIAIMEVAHG 417 (433)
T ss_dssp CHHHHHHHHHHHHHHHHHH--SC--SSCHHHHH------------HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTC
T ss_pred CHHHHHHHHHHHHHHHHHH--cC--CCChHHHH------------HHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHcC
Confidence 6677788888888887776 22 23344332 2237999999999999999999999999997754
No 10
>2w2u_A Hypothetical P60 katanin; hydrolase transport complex, nucleotide-binding, ESCRT, AAA-ATPase, cytokinesis, ATP-binding; 2.20A {Sulfolobus acidocaldarius}
Probab=52.60 E-value=49 Score=26.54 Aligned_cols=38 Identities=13% Similarity=0.025 Sum_probs=30.9
Q ss_pred hHhHHHHHHHHHHcCChHHHHHHHHHHHHHHHhhhccC
Q psy2472 430 AFRCFYIAESLAALRRWRDCVALYSRATAYASDAASSL 467 (571)
Q Consensus 430 A~rc~~lA~~y~~~~k~~EAlaL~~ra~~~~~~a~~~~ 467 (571)
|.....-|--.-..|+|.||+.+|..|.+.+..+...-
T Consensus 19 Ai~lv~~Ave~D~~g~y~eAl~lY~~aie~l~~alk~e 56 (83)
T 2w2u_A 19 ARKYAINAVKADKEGNAEEAITNYKKAIEVLAQLVSLY 56 (83)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHC
Confidence 44444566667889999999999999999999988754
No 11
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=51.10 E-value=28 Score=28.54 Aligned_cols=61 Identities=16% Similarity=0.214 Sum_probs=40.9
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcCChhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHH
Q psy2472 128 LVSRLRKAASYAVQLQTLCEAEVCDARTKLEAQAYVSWIVGVLHFELKLWKSAMKNLKEAQVVYEK 193 (571)
Q Consensus 128 ~~~RLkKA~~~A~~L~~l~~~~~~d~~t~lEa~AY~~~i~G~l~~E~~~W~~Al~~~~~ar~iy~~ 193 (571)
..+++.+|..+..+..+++...+ +.. ..+......|.+++..+++++|++.|..+..+...
T Consensus 101 ~~~~~~~A~~~~~~a~~~~~~~~-~~~----~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~ 161 (164)
T 3ro3_A 101 LLQDYEKAIDYHLKHLAIAQELK-DRI----GEGRACWSLGNAYTALGNHDQAMHFAEKHLEISRE 161 (164)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHTT-CHH----HHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTT
T ss_pred HHhhHHHHHHHHHHHHHHHHHcc-chH----hHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHH
Confidence 34567778888777777765322 221 22444556788888888888888888888766543
No 12
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=49.69 E-value=45 Score=27.24 Aligned_cols=61 Identities=16% Similarity=0.094 Sum_probs=45.8
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcCChhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Q psy2472 129 VSRLRKAASYAVQLQTLCEAEVCDARTKLEAQAYVSWIVGVLHFELKLWKSAMKNLKEAQVVYEKL 194 (571)
Q Consensus 129 ~~RLkKA~~~A~~L~~l~~~~~~d~~t~lEa~AY~~~i~G~l~~E~~~W~~Al~~~~~ar~iy~~L 194 (571)
.+++.+|..+..+..+++.... +.. ..+...+..|.+++..++|++|+..|..+..++...
T Consensus 22 ~~~~~~A~~~~~~al~~~~~~~-~~~----~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~ 82 (164)
T 3ro3_A 22 LGNFRDAVIAHEQRLLIAKEFG-DKA----AERIAYSNLGNAYIFLGEFETASEYYKKTLLLARQL 82 (164)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHT-CHH----HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred hcCHHHHHHHHHHHHHHHHHhC-Cch----HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHh
Confidence 4567788888888888875432 332 335566678999999999999999999998776654
No 13
>4a5x_A MITD1, MIT domain-containing protein 1; protein transport, ESCRT, cytokinesis, midbody; HET: P15; 1.91A {Homo sapiens}
Probab=48.19 E-value=71 Score=25.70 Aligned_cols=33 Identities=12% Similarity=0.117 Sum_probs=27.1
Q ss_pred HHHHHHHHcCChHHHHHHHHHHHHHHHhhhccC
Q psy2472 435 YIAESLAALRRWRDCVALYSRATAYASDAASSL 467 (571)
Q Consensus 435 ~lA~~y~~~~k~~EAlaL~~ra~~~~~~a~~~~ 467 (571)
.-|--.-..|+|.||+.+|..|.+.+-.+...-
T Consensus 21 ~~Ave~D~~g~y~eAl~lY~~Aie~ll~alk~e 53 (86)
T 4a5x_A 21 KRAVELDSESRYPQALVCYQEGIDLLLQVLKGT 53 (86)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhhC
Confidence 344445788999999999999999999888643
No 14
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=44.25 E-value=58 Score=28.28 Aligned_cols=64 Identities=16% Similarity=0.024 Sum_probs=48.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcCChhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHh
Q psy2472 128 LVSRLRKAASYAVQLQTLCEAEVCDARTKLEAQAYVSWIVGVLHFELKLWKSAMKNLKEAQVVYEKLMS 196 (571)
Q Consensus 128 ~~~RLkKA~~~A~~L~~l~~~~~~d~~t~lEa~AY~~~i~G~l~~E~~~W~~Al~~~~~ar~iy~~L~~ 196 (571)
..+++.+|..+..+...++...+ +... .++.....|.+++..++|++|...|..+-.++..+..
T Consensus 119 ~~g~~~~A~~~~~~al~~~~~~~-~~~~----~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~ 182 (203)
T 3gw4_A 119 HFGDLAGARQEYEKSLVYAQQAD-DQVA----IACAFRGLGDLAQQEKNLLEAQQHWLRARDIFAELED 182 (203)
T ss_dssp HHTCHHHHHHHHHHHHHHHHHTT-CHHH----HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTC
T ss_pred HhCCHHHHHHHHHHHHHHHHhcc-chHH----HHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHHHcCC
Confidence 45677888888888888875332 3322 3445567899999999999999999999888876654
No 15
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=44.09 E-value=79 Score=28.50 Aligned_cols=64 Identities=11% Similarity=0.116 Sum_probs=44.8
Q ss_pred CCchhHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHhHhHHHHHHHHHHcCChHHHHHHHHHHHHHHHh
Q psy2472 386 TRPQDLVRLYEIILQNLGELQQLSGMEDDAQYQESVEVRTKTYKAFRCFYIAESLAALRRWRDCVALYSRATAYASD 462 (571)
Q Consensus 386 ~k~~eivrLyd~ilq~l~ei~eLpgv~~D~~l~~~le~~~~~~~A~rc~~lA~~y~~~~k~~EAlaL~~ra~~~~~~ 462 (571)
-+++|-+.-|+-.|..+..-.++ |++.. ..+++++ |..|.++...|+|.||+.-|++|.+...+
T Consensus 71 gr~~eAl~~~~kAL~l~n~~~e~-----~pd~~------~A~~~~~--~~rG~aL~~lgr~eEAl~~y~kAlel~p~ 134 (159)
T 2hr2_A 71 RSFDEALHSADKALHYFNRRGEL-----NQDEG------KLWISAV--YSRALALDGLGRGAEAMPEFKKVVEMIEE 134 (159)
T ss_dssp TCHHHHHHHHHHHHHHHHHHCCT-----TSTHH------HHHHHHH--HHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhhhccccC-----CCchH------HHHHHHH--HhHHHHHHHCCCHHHHHHHHHHHHhcCCC
Confidence 37888888888888865555444 22211 2222221 35788999999999999999999998764
No 16
>1wfd_A Hypothetical protein 1500032H18; MIT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: a.7.14.1
Probab=43.38 E-value=90 Score=25.42 Aligned_cols=38 Identities=16% Similarity=0.167 Sum_probs=30.4
Q ss_pred hHhHHHHHHHHHHcCChHHHHHHHHHHHHHHHhhhccC
Q psy2472 430 AFRCFYIAESLAALRRWRDCVALYSRATAYASDAASSL 467 (571)
Q Consensus 430 A~rc~~lA~~y~~~~k~~EAlaL~~ra~~~~~~a~~~~ 467 (571)
|.-.+.-|--.-..|+|.||+.+|..|.+.+-.+...-
T Consensus 15 Ai~lv~~Ave~D~~g~y~eAl~~Y~~Aie~l~~alk~e 52 (93)
T 1wfd_A 15 AVAVLKRAVELDAESRYQQALVCYQEGIDMLLQVLKGT 52 (93)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHC
Confidence 44444555666788999999999999999999988744
No 17
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=41.69 E-value=30 Score=27.40 Aligned_cols=28 Identities=18% Similarity=0.328 Sum_probs=25.3
Q ss_pred HHHHHHHHHcCChHHHHHHHHHHHHHHH
Q psy2472 434 FYIAESLAALRRWRDCVALYSRATAYAS 461 (571)
Q Consensus 434 ~~lA~~y~~~~k~~EAlaL~~ra~~~~~ 461 (571)
+.+|.+|...|+|.+|+..|.++.....
T Consensus 45 ~~lg~~~~~~g~~~~A~~~~~~al~l~~ 72 (100)
T 3ma5_A 45 YHLGKLYERLDRTDDAIDTYAQGIEVAR 72 (100)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHhhhh
Confidence 4689999999999999999999998765
No 18
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=39.66 E-value=32 Score=27.77 Aligned_cols=32 Identities=13% Similarity=0.096 Sum_probs=29.2
Q ss_pred hHhHHHHHHHHHHcCChHHHHHHHHHHHHHHH
Q psy2472 430 AFRCFYIAESLAALRRWRDCVALYSRATAYAS 461 (571)
Q Consensus 430 A~rc~~lA~~y~~~~k~~EAlaL~~ra~~~~~ 461 (571)
+.=||.||..+...|.|..|..-|..|.....
T Consensus 5 a~dc~~lG~~~~~~~~y~~A~~W~~~Al~~~~ 36 (104)
T 2v5f_A 5 AEDCFELGKVAYTEADYYHTELWMEQALRQLD 36 (104)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccchHHHHHHHHHHHHhhh
Confidence 44599999999999999999999999998876
No 19
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=39.20 E-value=29 Score=29.78 Aligned_cols=29 Identities=10% Similarity=0.139 Sum_probs=22.0
Q ss_pred HhHHHHHHHHHHcCChHHHHHHHHHHHHH
Q psy2472 431 FRCFYIAESLAALRRWRDCVALYSRATAY 459 (571)
Q Consensus 431 ~rc~~lA~~y~~~~k~~EAlaL~~ra~~~ 459 (571)
...|.||.+|...|+|.+|+..|.++.+.
T Consensus 32 ~~~~~la~~y~~~~~~~~A~~~~~~al~~ 60 (150)
T 4ga2_A 32 IKGFYFAKLYYEAKEYDLAKKYICTYINV 60 (150)
T ss_dssp TTHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 45567888888888888888888877654
No 20
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=37.90 E-value=65 Score=26.62 Aligned_cols=57 Identities=7% Similarity=-0.018 Sum_probs=41.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcCChhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHH
Q psy2472 128 LVSRLRKAASYAVQLQTLCEAEVCDARTKLEAQAYVSWIVGVLHFELKLWKSAMKNLKEAQ 188 (571)
Q Consensus 128 ~~~RLkKA~~~A~~L~~l~~~~~~d~~t~lEa~AY~~~i~G~l~~E~~~W~~Al~~~~~ar 188 (571)
..+++.+|+.+..+.+++..+...+... .+.+-+..|.++...++|+.|++.|..+-
T Consensus 54 ~~~~~~~A~~~~~~al~~~~~~~~~~~~----~a~~~~~lg~~~~~~~~~~~A~~~~~kal 110 (127)
T 4gcn_A 54 EEKKFAECVQFCEKAVEVGRETRADYKL----IAKAMSRAGNAFQKQNDLSLAVQWFHRSL 110 (127)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHTTCCHHH----HHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HhhhHHHHHHHHHHHHHhCcccchhhHH----HHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 4567789999999988886543333322 23334567999999999999999988763
No 21
>2v6x_A Vacuolar protein sorting-associated protein 4; protein transport, vacuole, endosome, transport, ESCRT-III, VPS2, VPS4, SKD1, VPS4B, VPS4A; 1.98A {Saccharomyces cerevisiae}
Probab=37.68 E-value=1.2e+02 Score=24.01 Aligned_cols=33 Identities=15% Similarity=0.100 Sum_probs=26.9
Q ss_pred HHHHHHHHcCChHHHHHHHHHHHHHHHhhhccC
Q psy2472 435 YIAESLAALRRWRDCVALYSRATAYASDAASSL 467 (571)
Q Consensus 435 ~lA~~y~~~~k~~EAlaL~~ra~~~~~~a~~~~ 467 (571)
.-|.-.-..|+|.||+.+|..|.+++-.+...-
T Consensus 18 ~~Av~~D~~g~y~eAl~~Y~~aie~l~~a~k~e 50 (85)
T 2v6x_A 18 QKAIDLDTATQYEEAYTAYYNGLDYLMLALKYE 50 (85)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhC
Confidence 344455678999999999999999999887644
No 22
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=37.36 E-value=32 Score=27.19 Aligned_cols=26 Identities=12% Similarity=0.153 Sum_probs=23.6
Q ss_pred HHHHHHHHHcCChHHHHHHHHHHHHH
Q psy2472 434 FYIAESLAALRRWRDCVALYSRATAY 459 (571)
Q Consensus 434 ~~lA~~y~~~~k~~EAlaL~~ra~~~ 459 (571)
+.+|.+|...|+|.+|+..|.++.+.
T Consensus 11 ~~lg~~~~~~g~~~~A~~~~~~al~~ 36 (100)
T 3ma5_A 11 YALAQEHLKHDNASRALALFEELVET 36 (100)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 47899999999999999999999875
No 23
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=37.16 E-value=60 Score=34.03 Aligned_cols=62 Identities=8% Similarity=0.199 Sum_probs=43.7
Q ss_pred CchhHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHhHhHH-HHHHHHHHcCChHHHHHHHHHHHHHHHhhhc
Q psy2472 387 RPQDLVRLYEIILQNLGELQQLSGMEDDAQYQESVEVRTKTYKAFRCF-YIAESLAALRRWRDCVALYSRATAYASDAAS 465 (571)
Q Consensus 387 k~~eivrLyd~ilq~l~ei~eLpgv~~D~~l~~~le~~~~~~~A~rc~-~lA~~y~~~~k~~EAlaL~~ra~~~~~~a~~ 465 (571)
++.|-+.+|.-.+...+.+ | | .+.+... +++ .||.+|...|+|.||+.+|.+++........
T Consensus 313 ~~~eA~~~~~~~L~i~~~~--l-g-~~Hp~~a-------------~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG 375 (433)
T 3qww_A 313 SPSELLEICELSQEKMSSV--F-E-DSNVYML-------------HMMYQAMGVCLYMQDWEGALKYGQKIIKPYSKHYP 375 (433)
T ss_dssp CHHHHHHHHHHHHHHHTTT--B-C-TTSHHHH-------------HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSC
T ss_pred CHHHHHHHHHHHHHHhhCc--c-C-hhchHHH-------------HHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHcC
Confidence 5677777777666655443 1 1 2233332 333 6899999999999999999999999886654
No 24
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=37.08 E-value=36 Score=25.30 Aligned_cols=27 Identities=7% Similarity=0.303 Sum_probs=21.2
Q ss_pred HHHHHHHHHHcCChHHHHHHHHHHHHH
Q psy2472 433 CFYIAESLAALRRWRDCVALYSRATAY 459 (571)
Q Consensus 433 c~~lA~~y~~~~k~~EAlaL~~ra~~~ 459 (571)
++.+|..|...|+|.+|+..|.++...
T Consensus 12 ~~~la~~~~~~~~~~~A~~~~~~a~~~ 38 (91)
T 1na3_A 12 WYNLGNAYYKQGDYDEAIEYYQKALEL 38 (91)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHccCHHHHHHHHHHHHhc
Confidence 456788888888888888888887754
No 25
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=34.50 E-value=2.6e+02 Score=29.59 Aligned_cols=62 Identities=13% Similarity=0.134 Sum_probs=44.8
Q ss_pred CchhHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHhHhHH-HHHHHHHHcCChHHHHHHHHHHHHHHHhhhc
Q psy2472 387 RPQDLVRLYEIILQNLGELQQLSGMEDDAQYQESVEVRTKTYKAFRCF-YIAESLAALRRWRDCVALYSRATAYASDAAS 465 (571)
Q Consensus 387 k~~eivrLyd~ilq~l~ei~eLpgv~~D~~l~~~le~~~~~~~A~rc~-~lA~~y~~~~k~~EAlaL~~ra~~~~~~a~~ 465 (571)
++.+-+.+|...|...+.+. | .+.+.. .+++ .||.+|...|+|.||..+|.+|+........
T Consensus 324 ~~~eA~~l~~~aL~~~~~~l---g-~~Hp~~-------------a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG 386 (490)
T 3n71_A 324 LYHEVVKLCRECLEKQEPVF---A-DTNLYV-------------LRLLSIASEVLSYLQAYEEASHYARRMVDGYMKLYH 386 (490)
T ss_dssp CHHHHHHHHHHHHHHHTTTB---C-TTSHHH-------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSC
T ss_pred CHHHHHHHHHHHHHHHHHhc---C-CCCHHH-------------HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHcC
Confidence 67888888887776554441 2 233333 2233 6899999999999999999999998886654
No 26
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=34.32 E-value=37 Score=26.10 Aligned_cols=26 Identities=15% Similarity=0.470 Sum_probs=22.9
Q ss_pred HHHHHHHHHcCChHHHHHHHHHHHHH
Q psy2472 434 FYIAESLAALRRWRDCVALYSRATAY 459 (571)
Q Consensus 434 ~~lA~~y~~~~k~~EAlaL~~ra~~~ 459 (571)
+.+|.+|...|+|.+|+..|.++...
T Consensus 39 ~~lg~~~~~~~~~~~A~~~~~~al~~ 64 (99)
T 2kc7_A 39 YLMGNAYRKLGDWQKALNNYQSAIEL 64 (99)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHhc
Confidence 46899999999999999999998854
No 27
>2dl1_A Spartin; SPG20, MIT, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=34.14 E-value=2.2e+02 Score=24.33 Aligned_cols=72 Identities=11% Similarity=0.020 Sum_probs=50.3
Q ss_pred HHHHHHHhHhHHHHHHHHHHcCChHHHHHHHHHHHHHHHhhhccCCCCCCcc---chHHHHHHHHHHHhhhHHHHHH
Q psy2472 423 VRTKTYKAFRCFYIAESLAALRRWRDCVALYSRATAYASDAASSLPSSGELA---TLKPELATLEAAIDSNKYSALA 496 (571)
Q Consensus 423 ~~~~~~~A~rc~~lA~~y~~~~k~~EAlaL~~ra~~~~~~a~~~~~~~~~~~---~l~~~l~~L~~~i~~~~~~~~A 496 (571)
.+..|=+|++|..-|-..-..|+-.+|+.||.+...++..+..-- ... |. .--+....|+..++.....+.-
T Consensus 15 ik~~h~~AF~~Is~AL~~DE~g~k~~Al~lYk~GI~eLe~Gl~I~-~~~-~~~~g~~we~Ar~lq~KM~~nL~~v~~ 89 (116)
T 2dl1_A 15 IREAYKKAFLFVNKGLNTDELGQKEEAKNYYKQGIGHLLRGISIS-SKE-SEHTGPGWESARQMQQKMKETLQNVRT 89 (116)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHSSC-CCC-TTCCCSHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhhhhcCCHHHHHHHHHHHHHHHHHhcccc-ccC-CCCCChhHHHHHHHHHHHHHHHHHHHH
Confidence 466777888888888888888999999999999999999998632 211 11 1115566666666555444443
No 28
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=33.68 E-value=86 Score=28.24 Aligned_cols=33 Identities=15% Similarity=0.123 Sum_probs=28.1
Q ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHH
Q psy2472 159 AQAYVSWIVGVLHFELKLWKSAMKNLKEAQVVY 191 (571)
Q Consensus 159 a~AY~~~i~G~l~~E~~~W~~Al~~~~~ar~iy 191 (571)
++||...-.|..+|..++|++|+..|..|-.+-
T Consensus 9 ~~a~~~~~~G~~l~~~g~~eeAi~~Y~kAL~l~ 41 (159)
T 2hr2_A 9 VGAYLALSDAQRQLVAGEYDEAAANCRRAMEIS 41 (159)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhC
Confidence 478888899999999999999999998876654
No 29
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=33.20 E-value=1.3e+02 Score=25.86 Aligned_cols=62 Identities=11% Similarity=0.084 Sum_probs=45.9
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcCChhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHH
Q psy2472 128 LVSRLRKAASYAVQLQTLCEAEVCDARTKLEAQAYVSWIVGVLHFELKLWKSAMKNLKEAQVVYEK 193 (571)
Q Consensus 128 ~~~RLkKA~~~A~~L~~l~~~~~~d~~t~lEa~AY~~~i~G~l~~E~~~W~~Al~~~~~ar~iy~~ 193 (571)
..+++.+|..+..+..+++...+-+. . ..++..+..|.+++..++|++|+..|..+-.+...
T Consensus 78 ~~g~~~~A~~~~~~al~~~~~~~~~~--~--~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~ 139 (203)
T 3gw4_A 78 MAGNWDAARRCFLEERELLASLPEDP--L--AASANAYEVATVALHFGDLAGARQEYEKSLVYAQQ 139 (203)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHSCCCH--H--HHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHHHHHHHHHcCccH--H--HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHh
Confidence 34577889999888888876432121 1 23455667899999999999999999999777543
No 30
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=32.44 E-value=1.9e+02 Score=27.19 Aligned_cols=31 Identities=13% Similarity=0.027 Sum_probs=27.4
Q ss_pred HH-HHHHHHHHcCChHHHHHHHHHHHHHHHhh
Q psy2472 433 CF-YIAESLAALRRWRDCVALYSRATAYASDA 463 (571)
Q Consensus 433 c~-~lA~~y~~~~k~~EAlaL~~ra~~~~~~a 463 (571)
++ .||.+|...|+|.+|+..|.+|.+.+...
T Consensus 157 ~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~ 188 (293)
T 3u3w_A 157 IENAIANIYAENGYLKKGIDLFEQILKQLEAL 188 (293)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhc
Confidence 45 89999999999999999999999877643
No 31
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=32.34 E-value=42 Score=27.05 Aligned_cols=26 Identities=12% Similarity=0.262 Sum_probs=22.7
Q ss_pred HHHHHHHHHcCChHHHHHHHHHHHHH
Q psy2472 434 FYIAESLAALRRWRDCVALYSRATAY 459 (571)
Q Consensus 434 ~~lA~~y~~~~k~~EAlaL~~ra~~~ 459 (571)
+.+|.+|...|+|.+|+..|.++.+.
T Consensus 31 ~~lg~~~~~~~~~~~A~~~~~~al~~ 56 (117)
T 3k9i_A 31 LGLGSTFRTLGEYRKAEAVLANGVKQ 56 (117)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 37899999999999999999998765
No 32
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=31.15 E-value=39 Score=29.28 Aligned_cols=25 Identities=8% Similarity=0.149 Sum_probs=19.9
Q ss_pred HHHHHHHHcCChHHHHHHHHHHHHH
Q psy2472 435 YIAESLAALRRWRDCVALYSRATAY 459 (571)
Q Consensus 435 ~lA~~y~~~~k~~EAlaL~~ra~~~ 459 (571)
.||.+|...|+|.+|+..|.+|.+.
T Consensus 10 ~lG~~~~~~g~~~~A~~~~~~al~~ 34 (184)
T 3vtx_A 10 DIGDKKRTKGDFDGAIRAYKKVLKA 34 (184)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 5788888888888888888887753
No 33
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=30.67 E-value=5e+02 Score=27.34 Aligned_cols=63 Identities=8% Similarity=-0.033 Sum_probs=46.8
Q ss_pred CchhHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHhHhHHHHHHHHHHcCChHHHHHHHHHHHHHHHhhhc
Q psy2472 387 RPQDLVRLYEIILQNLGELQQLSGMEDDAQYQESVEVRTKTYKAFRCFYIAESLAALRRWRDCVALYSRATAYASDAAS 465 (571)
Q Consensus 387 k~~eivrLyd~ilq~l~ei~eLpgv~~D~~l~~~le~~~~~~~A~rc~~lA~~y~~~~k~~EAlaL~~ra~~~~~~a~~ 465 (571)
++.+=..+|.-.|...+.+ | | .+.++.. .-...||.+|...|+|.||..+|.+|+.....+..
T Consensus 366 ~~~eA~~~~~~aL~i~~~~--l-G-~~Hp~~a------------~~l~nLa~~~~~~G~~~eA~~~~~~Al~i~~~~lG 428 (490)
T 3n71_A 366 AYEEASHYARRMVDGYMKL--Y-H-HNNAQLG------------MAVMRAGLTNWHAGHIEVGHGMICKAYAILLVTHG 428 (490)
T ss_dssp CHHHHHHHHHHHHHHHHHH--S-C-TTCHHHH------------HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTC
T ss_pred CHHHHHHHHHHHHHHHHHH--c-C-CCCHHHH------------HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhC
Confidence 6677778888887776666 2 1 2334432 22236999999999999999999999999997764
No 34
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=30.40 E-value=54 Score=24.25 Aligned_cols=26 Identities=8% Similarity=0.327 Sum_probs=23.0
Q ss_pred HHHHHHHHHcCChHHHHHHHHHHHHH
Q psy2472 434 FYIAESLAALRRWRDCVALYSRATAY 459 (571)
Q Consensus 434 ~~lA~~y~~~~k~~EAlaL~~ra~~~ 459 (571)
+.+|.+|...|+|.+|+..|.++...
T Consensus 47 ~~l~~~~~~~~~~~~A~~~~~~a~~~ 72 (91)
T 1na3_A 47 YNLGNAYYKQGDYDEAIEYYQKALEL 72 (91)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHhc
Confidence 47899999999999999999998764
No 35
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=30.15 E-value=59 Score=25.07 Aligned_cols=24 Identities=21% Similarity=0.241 Sum_probs=14.5
Q ss_pred HHHHHHHHcCChHHHHHHHHHHHH
Q psy2472 435 YIAESLAALRRWRDCVALYSRATA 458 (571)
Q Consensus 435 ~lA~~y~~~~k~~EAlaL~~ra~~ 458 (571)
.+|..|...|+|.+|+..|.++..
T Consensus 9 ~~g~~~~~~~~~~~A~~~~~~al~ 32 (111)
T 2l6j_A 9 EQGNSLFKQGLYREAVHCYDQLIT 32 (111)
T ss_dssp HHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHh
Confidence 456666666666666666665554
No 36
>2cpt_A SKD1 protein, vacuolar sorting protein 4B; MIT, helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.7.14.1
Probab=29.43 E-value=2.4e+02 Score=23.92 Aligned_cols=32 Identities=16% Similarity=0.205 Sum_probs=26.2
Q ss_pred HHHHHHHHcCChHHHHHHHHHHHHHHHhhhcc
Q psy2472 435 YIAESLAALRRWRDCVALYSRATAYASDAASS 466 (571)
Q Consensus 435 ~lA~~y~~~~k~~EAlaL~~ra~~~~~~a~~~ 466 (571)
.-|.-.-..|+|.||+.||..|.+++-.+...
T Consensus 23 ~~Ave~D~ag~y~eAl~lY~~Aie~l~~alk~ 54 (117)
T 2cpt_A 23 SKAAQEDKAGNYEEALQLYQHAVQYFLHVVKY 54 (117)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHccCHHHHHHHHHHHHHHHHHHHHh
Confidence 34445567799999999999999999988864
No 37
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=28.54 E-value=53 Score=26.08 Aligned_cols=26 Identities=12% Similarity=0.287 Sum_probs=18.8
Q ss_pred HHHHHHHHHcCChHHHHHHHHHHHHH
Q psy2472 434 FYIAESLAALRRWRDCVALYSRATAY 459 (571)
Q Consensus 434 ~~lA~~y~~~~k~~EAlaL~~ra~~~ 459 (571)
+.+|.+|...|+|.+|+..|.++...
T Consensus 23 ~~lg~~~~~~g~~~~A~~~~~~al~~ 48 (115)
T 2kat_A 23 FTLGKTYAEHEQFDAALPHLRAALDF 48 (115)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHccCHHHHHHHHHHHHHH
Confidence 35777777778888777777777653
No 38
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=28.49 E-value=50 Score=26.53 Aligned_cols=26 Identities=27% Similarity=0.294 Sum_probs=23.1
Q ss_pred HHHHHHHHHcCChHHHHHHHHHHHHH
Q psy2472 434 FYIAESLAALRRWRDCVALYSRATAY 459 (571)
Q Consensus 434 ~~lA~~y~~~~k~~EAlaL~~ra~~~ 459 (571)
+.+|.+|...|+|.+|+..|.++...
T Consensus 65 ~~l~~~~~~~g~~~~A~~~~~~al~~ 90 (117)
T 3k9i_A 65 VFYAMVLYNLGRYEQGVELLLKIIAE 90 (117)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 36899999999999999999999764
No 39
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=28.08 E-value=56 Score=24.85 Aligned_cols=26 Identities=19% Similarity=0.353 Sum_probs=22.8
Q ss_pred HHHHHHHHHcCChHHHHHHHHHHHHH
Q psy2472 434 FYIAESLAALRRWRDCVALYSRATAY 459 (571)
Q Consensus 434 ~~lA~~y~~~~k~~EAlaL~~ra~~~ 459 (571)
+.+|.+|...|+|.+|+..|.++...
T Consensus 44 ~~~a~~~~~~~~~~~A~~~~~~a~~~ 69 (112)
T 2kck_A 44 LMKGKALYNLERYEEAVDCYNYVINV 69 (112)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHccCHHHHHHHHHHHHHh
Confidence 47899999999999999999988754
No 40
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=27.68 E-value=45 Score=25.79 Aligned_cols=25 Identities=12% Similarity=0.165 Sum_probs=22.1
Q ss_pred HHHHHHHHHcCChHHHHHHHHHHHH
Q psy2472 434 FYIAESLAALRRWRDCVALYSRATA 458 (571)
Q Consensus 434 ~~lA~~y~~~~k~~EAlaL~~ra~~ 458 (571)
+.+|.+|...|+|.+|+..|.++..
T Consensus 42 ~~lg~~~~~~g~~~~A~~~~~~al~ 66 (111)
T 2l6j_A 42 SNKAMALIKLGEYTQAIQMCQQGLR 66 (111)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 4789999999999999999988864
No 41
>2crb_A Nuclear receptor binding factor 2; NRBF-2, MIT domain, helix bundle, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.7.16.1
Probab=27.21 E-value=67 Score=26.52 Aligned_cols=32 Identities=25% Similarity=0.359 Sum_probs=28.2
Q ss_pred HHHHHHHcCChHHHHHHHHHHHHHHHhhhccC
Q psy2472 436 IAESLAALRRWRDCVALYSRATAYASDAASSL 467 (571)
Q Consensus 436 lA~~y~~~~k~~EAlaL~~ra~~~~~~a~~~~ 467 (571)
-|.-+...|+|.||+..+..|..++.+|.+..
T Consensus 21 rAe~ll~~gkydeAIech~kAa~yL~eAmklt 52 (97)
T 2crb_A 21 RADRLLAAGKYEEAISCHRKATTYLSEAMKLT 52 (97)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHhcCCHHHHHHHHHHHHHHHHHHHHhh
Confidence 46777789999999999999999999998743
No 42
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=26.95 E-value=67 Score=25.47 Aligned_cols=28 Identities=11% Similarity=0.113 Sum_probs=25.3
Q ss_pred HHHHHHHHHcCChHHHHHHHHHHHHHHH
Q psy2472 434 FYIAESLAALRRWRDCVALYSRATAYAS 461 (571)
Q Consensus 434 ~~lA~~y~~~~k~~EAlaL~~ra~~~~~ 461 (571)
+.+|.+|...|++.+|...|.++.....
T Consensus 57 ~~la~~~~~~g~~~~A~~~~~~al~~~~ 84 (115)
T 2kat_A 57 KWLGKTLQGQGDRAGARQAWESGLAAAQ 84 (115)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhcc
Confidence 5789999999999999999999988765
No 43
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=26.63 E-value=2e+02 Score=22.17 Aligned_cols=58 Identities=14% Similarity=0.061 Sum_probs=39.9
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcCChhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHH
Q psy2472 129 VSRLRKAASYAVQLQTLCEAEVCDARTKLEAQAYVSWIVGVLHFELKLWKSAMKNLKEAQVV 190 (571)
Q Consensus 129 ~~RLkKA~~~A~~L~~l~~~~~~d~~t~lEa~AY~~~i~G~l~~E~~~W~~Al~~~~~ar~i 190 (571)
..+..+|+.+.....++......+.. ..+...+..|.+++..++|+.|++.|..+..+
T Consensus 51 ~~~~~~A~~~~~~~~~~~~~~~~~~~----~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~ 108 (131)
T 1elr_A 51 KGDYNKCRELCEKAIEVGRENREDYR----QIAKAYARIGNSYFKEEKYKDAIHFYNKSLAE 108 (131)
T ss_dssp HTCHHHHHHHHHHHHHHHHHSTTCHH----HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred hccHHHHHHHHHHHHhhccccchhHH----HHHHHHHHHHHHHHHhccHHHHHHHHHHHHHh
Confidence 45677888888888877543222222 12344567788999999999999998877653
No 44
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=26.29 E-value=78 Score=25.41 Aligned_cols=25 Identities=24% Similarity=0.242 Sum_probs=18.1
Q ss_pred HHHHHHHHcCChHHHHHHHHHHHHH
Q psy2472 435 YIAESLAALRRWRDCVALYSRATAY 459 (571)
Q Consensus 435 ~lA~~y~~~~k~~EAlaL~~ra~~~ 459 (571)
.+|.+|...|+|.+|+..|.++.+.
T Consensus 43 ~~a~~~~~~~~~~~A~~~~~~al~~ 67 (126)
T 3upv_A 43 NRAAALAKLMSFPEAIADCNKAIEK 67 (126)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHHh
Confidence 5777777777777777777777654
No 45
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=26.18 E-value=1.2e+02 Score=24.06 Aligned_cols=26 Identities=8% Similarity=0.068 Sum_probs=23.1
Q ss_pred HHHHHHHHHcCChHHHHHHHHHHHHH
Q psy2472 434 FYIAESLAALRRWRDCVALYSRATAY 459 (571)
Q Consensus 434 ~~lA~~y~~~~k~~EAlaL~~ra~~~ 459 (571)
.++|.+|...|++.+|+.++.++...
T Consensus 50 ~~L~~~~~~~g~~~~A~~~~~~al~l 75 (104)
T 2v5f_A 50 DYLSYAVYQQGDLDKALLLTKKLLEL 75 (104)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHccCHHHHHHHHHHHHhc
Confidence 57899999999999999999998753
No 46
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=26.17 E-value=61 Score=26.60 Aligned_cols=26 Identities=8% Similarity=-0.097 Sum_probs=22.9
Q ss_pred HHHHHHHHHcCChHHHHHHHHHHHHH
Q psy2472 434 FYIAESLAALRRWRDCVALYSRATAY 459 (571)
Q Consensus 434 ~~lA~~y~~~~k~~EAlaL~~ra~~~ 459 (571)
+.+|.+|...|++.+|+..|.+|...
T Consensus 55 ~~lg~~~~~~g~~~~A~~~~~~al~l 80 (121)
T 1hxi_A 55 RSLGLTQAENEKDGLAIIALNHARML 80 (121)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 46899999999999999999988764
No 47
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=26.07 E-value=62 Score=25.82 Aligned_cols=26 Identities=19% Similarity=0.327 Sum_probs=22.7
Q ss_pred HHHHHHHHHcCChHHHHHHHHHHHHH
Q psy2472 434 FYIAESLAALRRWRDCVALYSRATAY 459 (571)
Q Consensus 434 ~~lA~~y~~~~k~~EAlaL~~ra~~~ 459 (571)
+.+|.+|...|+|.+|+..|.++...
T Consensus 43 ~~lg~~~~~~~~~~~A~~~~~~~~~~ 68 (129)
T 2xev_A 43 YWLGESYYATRNFQLAEAQFRDLVSR 68 (129)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhccHHHHHHHHHHHHHH
Confidence 46899999999999999999998764
No 48
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=25.67 E-value=1.6e+02 Score=22.14 Aligned_cols=53 Identities=15% Similarity=0.162 Sum_probs=37.5
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcCChhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHH
Q psy2472 128 LVSRLRKAASYAVQLQTLCEAEVCDARTKLEAQAYVSWIVGVLHFELKLWKSAMKNLKEAQVV 190 (571)
Q Consensus 128 ~~~RLkKA~~~A~~L~~l~~~~~~d~~t~lEa~AY~~~i~G~l~~E~~~W~~Al~~~~~ar~i 190 (571)
..+++.+|+.+..+.+++- +. +.. +..+..|.+++..++|++|+..|..+-.+
T Consensus 12 ~~~~~~~A~~~~~~al~~~--p~-~~~-------~~~~~lg~~~~~~~~~~~A~~~~~~al~~ 64 (99)
T 2kc7_A 12 NQGDIENALQALEEFLQTE--PV-GKD-------EAYYLMGNAYRKLGDWQKALNNYQSAIEL 64 (99)
T ss_dssp HHTCHHHHHHHHHHHHHHC--SS-THH-------HHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHHHHHHC--CC-cHH-------HHHHHHHHHHHHcCCHHHHHHHHHHHHhc
Confidence 3456678888888777652 22 211 25567899999999999999999877544
No 49
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=25.36 E-value=3.1e+02 Score=24.97 Aligned_cols=28 Identities=7% Similarity=0.055 Sum_probs=24.8
Q ss_pred hHHHHHHHHHHcCChHHHHHHHHHHHHH
Q psy2472 432 RCFYIAESLAALRRWRDCVALYSRATAY 459 (571)
Q Consensus 432 rc~~lA~~y~~~~k~~EAlaL~~ra~~~ 459 (571)
..+.+|.+|...|+|.+|+..|.++...
T Consensus 150 ~~~~la~~~~~~g~~~~A~~~~~~~l~~ 177 (261)
T 3qky_A 150 KQYEAARLYERRELYEAAAVTYEAVFDA 177 (261)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHccCHHHHHHHHHHHHHH
Confidence 3578999999999999999999998764
No 50
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=25.07 E-value=1.2e+02 Score=31.45 Aligned_cols=31 Identities=6% Similarity=-0.093 Sum_probs=27.7
Q ss_pred HHHHHHHHcCChHHHHHHHHHHHHHHHhhhc
Q psy2472 435 YIAESLAALRRWRDCVALYSRATAYASDAAS 465 (571)
Q Consensus 435 ~lA~~y~~~~k~~EAlaL~~ra~~~~~~a~~ 465 (571)
.||.+|...|+|.||+.++.+++........
T Consensus 334 ~L~~~y~~~g~~~eA~~~~~~~L~i~~~~lg 364 (429)
T 3qwp_A 334 CAMDACINLGLLEEALFYGTRTMEPYRIFFP 364 (429)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHhhccHHHHHHHHHHHHHhHHHHcC
Confidence 6888899999999999999999999886654
No 51
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=24.83 E-value=1.8e+02 Score=28.63 Aligned_cols=31 Identities=13% Similarity=0.153 Sum_probs=26.6
Q ss_pred HHHHHHHHHcCChHHHHHHHHHHHHHHHhhh
Q psy2472 434 FYIAESLAALRRWRDCVALYSRATAYASDAA 464 (571)
Q Consensus 434 ~~lA~~y~~~~k~~EAlaL~~ra~~~~~~a~ 464 (571)
..+|..|...|+|.+|+..|.++.+.-++..
T Consensus 340 ~~la~~y~~~g~~~~A~~~~~~al~~~~~~~ 370 (378)
T 3q15_A 340 RSAAAVFESSCHFEQAAAFYRKVLKAQEDIL 370 (378)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHh
Confidence 4799999999999999999999988766543
No 52
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=24.79 E-value=65 Score=26.88 Aligned_cols=25 Identities=12% Similarity=0.165 Sum_probs=16.8
Q ss_pred HHHHHHHHcCChHHHHHHHHHHHHH
Q psy2472 435 YIAESLAALRRWRDCVALYSRATAY 459 (571)
Q Consensus 435 ~lA~~y~~~~k~~EAlaL~~ra~~~ 459 (571)
.+|.+|...|+|.+|+..|.++...
T Consensus 57 ~lg~~~~~~g~~~~A~~~~~~al~~ 81 (142)
T 2xcb_A 57 GLGACRQSLGLYEQALQSYSYGALM 81 (142)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHhc
Confidence 4666677777777777777766553
No 53
>2xze_A STAM-binding protein; hydrolase-protein transport complex; 1.75A {Homo sapiens}
Probab=24.70 E-value=3.5e+02 Score=23.81 Aligned_cols=43 Identities=7% Similarity=0.057 Sum_probs=36.1
Q ss_pred HHHHHhHhHH-HHHHHHHHcCChHHHHHHHHHHHHHHHhhhccC
Q psy2472 425 TKTYKAFRCF-YIAESLAALRRWRDCVALYSRATAYASDAASSL 467 (571)
Q Consensus 425 ~~~~~A~rc~-~lA~~y~~~~k~~EAlaL~~ra~~~~~~a~~~~ 467 (571)
..||++.... -.|..|...|....|+.||-|..+.+-+..+.-
T Consensus 34 ~~ylrta~~llr~A~~y~~egd~e~AYily~R~~~L~~e~IpkH 77 (146)
T 2xze_A 34 RRYFRSGVEIIRMASIYSEEGNIEHAFILYNKYITLFIEKLPKH 77 (146)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHTTGGGS
T ss_pred HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHcccC
Confidence 4566666555 889999999999999999999999998777644
No 54
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=24.65 E-value=59 Score=28.04 Aligned_cols=26 Identities=12% Similarity=0.063 Sum_probs=23.4
Q ss_pred HHHHHHHHHcCChHHHHHHHHHHHHH
Q psy2472 434 FYIAESLAALRRWRDCVALYSRATAY 459 (571)
Q Consensus 434 ~~lA~~y~~~~k~~EAlaL~~ra~~~ 459 (571)
+.+|.+|...|++.+|+..|.+|.+.
T Consensus 145 ~~lg~~~~~~g~~~~A~~~~~~al~~ 170 (184)
T 3vtx_A 145 QSIGLAYEGKGLRDEAVKYFKKALEK 170 (184)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHhC
Confidence 36899999999999999999999864
No 55
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=24.03 E-value=67 Score=27.41 Aligned_cols=28 Identities=18% Similarity=0.075 Sum_probs=24.8
Q ss_pred HHHHHHHHHcCChHHHHHHHHHHHHHHH
Q psy2472 434 FYIAESLAALRRWRDCVALYSRATAYAS 461 (571)
Q Consensus 434 ~~lA~~y~~~~k~~EAlaL~~ra~~~~~ 461 (571)
+.+|.+|...|++.+|+..|.++.....
T Consensus 93 ~~lg~~~~~~g~~~~A~~~~~~al~~~p 120 (148)
T 2vgx_A 93 FHAAECLLQXGELAEAESGLFLAQELIA 120 (148)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHCc
Confidence 5789999999999999999999987654
No 56
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=23.95 E-value=1.2e+02 Score=25.57 Aligned_cols=67 Identities=7% Similarity=0.048 Sum_probs=42.8
Q ss_pred CchhHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHhHhHHHHHHHHHHcCChHHHHHHHHHHHHH
Q psy2472 387 RPQDLVRLYEIILQNLGELQQLSGMEDDAQYQESVEVRTKTYKAFRCFYIAESLAALRRWRDCVALYSRATAY 459 (571)
Q Consensus 387 k~~eivrLyd~ilq~l~ei~eLpgv~~D~~l~~~le~~~~~~~A~rc~~lA~~y~~~~k~~EAlaL~~ra~~~ 459 (571)
++.+-+..|...+..+...... +-..|++.. .++- ..+.-.+.+|.+|...|+|.+|+..|.+|...
T Consensus 26 ~~~~A~~~y~~al~~~~~~~~~-~~~~~~~~~-~~~~----~~~~~~~nla~~~~~~~~~~~A~~~~~~al~~ 92 (162)
T 3rkv_A 26 DYKEAIDAYRDALTRLDTLILR-EKPGEPEWV-ELDR----KNIPLYANMSQCYLNIGDLHEAEETSSEVLKR 92 (162)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHT-SCTTSHHHH-HHHH----THHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHhccc-CCCCHHHHH-HHHH----HHHHHHHHHHHHHHhcCcHHHHHHHHHHHHhc
Confidence 7888889999988887766432 112233221 1111 11112236888899999999999999888765
No 57
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=23.95 E-value=72 Score=25.64 Aligned_cols=28 Identities=11% Similarity=0.142 Sum_probs=25.1
Q ss_pred HHHHHHHHHcCChHHHHHHHHHHHHHHH
Q psy2472 434 FYIAESLAALRRWRDCVALYSRATAYAS 461 (571)
Q Consensus 434 ~~lA~~y~~~~k~~EAlaL~~ra~~~~~ 461 (571)
+.+|.+|...|+|.+|+..|.++...-.
T Consensus 76 ~~lg~~~~~~~~~~~A~~~~~~al~~~p 103 (126)
T 3upv_A 76 IRKATAQIAVKEYASALETLDAARTKDA 103 (126)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCHHHHHHHHHHHHHhCc
Confidence 3689999999999999999999998764
No 58
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=23.84 E-value=67 Score=27.99 Aligned_cols=25 Identities=20% Similarity=0.242 Sum_probs=19.7
Q ss_pred HHHHHHHHcCChHHHHHHHHHHHHH
Q psy2472 435 YIAESLAALRRWRDCVALYSRATAY 459 (571)
Q Consensus 435 ~lA~~y~~~~k~~EAlaL~~ra~~~ 459 (571)
.+|.+|...|+|.+|+..|.+|...
T Consensus 75 ~lg~~~~~~g~~~~Ai~~~~~al~l 99 (151)
T 3gyz_A 75 GLAAIYQIKEQFQQAADLYAVAFAL 99 (151)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHccHHHHHHHHHHHHhh
Confidence 5788888888888888888887654
No 59
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=23.76 E-value=71 Score=26.43 Aligned_cols=26 Identities=27% Similarity=0.427 Sum_probs=23.1
Q ss_pred HHHHHHHHHcCChHHHHHHHHHHHHH
Q psy2472 434 FYIAESLAALRRWRDCVALYSRATAY 459 (571)
Q Consensus 434 ~~lA~~y~~~~k~~EAlaL~~ra~~~ 459 (571)
+.+|.+|...|+|.+|+..|.++.+.
T Consensus 85 ~~lg~~~~~~~~~~~A~~~~~~al~l 110 (126)
T 4gco_A 85 IRKAACLVAMREWSKAQRAYEDALQV 110 (126)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHH
Confidence 36899999999999999999998764
No 60
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=23.72 E-value=1e+02 Score=25.33 Aligned_cols=24 Identities=8% Similarity=0.117 Sum_probs=22.1
Q ss_pred HHHHHHHHcCChHHHHHHHHHHHH
Q psy2472 435 YIAESLAALRRWRDCVALYSRATA 458 (571)
Q Consensus 435 ~lA~~y~~~~k~~EAlaL~~ra~~ 458 (571)
.+|.+|...|+|.+|+..|.+|+.
T Consensus 88 ~lg~~~~~~~~~~~A~~~~~kal~ 111 (127)
T 4gcn_A 88 RAGNAFQKQNDLSLAVQWFHRSLS 111 (127)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHh
Confidence 689999999999999999999875
No 61
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=23.72 E-value=68 Score=27.97 Aligned_cols=26 Identities=8% Similarity=0.002 Sum_probs=23.7
Q ss_pred HHHHHHHHHcCChHHHHHHHHHHHHH
Q psy2472 434 FYIAESLAALRRWRDCVALYSRATAY 459 (571)
Q Consensus 434 ~~lA~~y~~~~k~~EAlaL~~ra~~~ 459 (571)
+.+|.+|...|++.+|+..|.+|.+.
T Consensus 108 ~~lg~~~~~lg~~~eA~~~~~~al~l 133 (151)
T 3gyz_A 108 FHTGQCQLRLKAPLKAKECFELVIQH 133 (151)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 46999999999999999999999875
No 62
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=23.61 E-value=69 Score=27.32 Aligned_cols=26 Identities=12% Similarity=0.186 Sum_probs=23.3
Q ss_pred HHHHHHHHHcCChHHHHHHHHHHHHH
Q psy2472 434 FYIAESLAALRRWRDCVALYSRATAY 459 (571)
Q Consensus 434 ~~lA~~y~~~~k~~EAlaL~~ra~~~ 459 (571)
+.+|.+|...|+|.+|+..|.++...
T Consensus 59 ~~lg~~~~~~g~~~~A~~~~~~al~l 84 (148)
T 2vgx_A 59 LGLGACRQAMGQYDLAIHSYSYGAVM 84 (148)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHhc
Confidence 46899999999999999999999765
No 63
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=23.31 E-value=72 Score=26.58 Aligned_cols=28 Identities=25% Similarity=0.180 Sum_probs=25.0
Q ss_pred HHHHHHHHHcCChHHHHHHHHHHHHHHH
Q psy2472 434 FYIAESLAALRRWRDCVALYSRATAYAS 461 (571)
Q Consensus 434 ~~lA~~y~~~~k~~EAlaL~~ra~~~~~ 461 (571)
+.+|.+|...|+|.+|+..|.++.....
T Consensus 90 ~~lg~~~~~~g~~~~A~~~~~~al~~~p 117 (142)
T 2xcb_A 90 FHAAECHLQLGDLDGAESGFYSARALAA 117 (142)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCC
Confidence 4689999999999999999999987765
No 64
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=23.31 E-value=98 Score=24.14 Aligned_cols=28 Identities=14% Similarity=0.145 Sum_probs=21.8
Q ss_pred HHHHHHHHHcCChHHHHHHHHHHHHHHH
Q psy2472 434 FYIAESLAALRRWRDCVALYSRATAYAS 461 (571)
Q Consensus 434 ~~lA~~y~~~~k~~EAlaL~~ra~~~~~ 461 (571)
+.+|.+|...|+|.+|+..|.++.....
T Consensus 42 ~~la~~~~~~~~~~~A~~~~~~~~~~~~ 69 (131)
T 1elr_A 42 TNQAAVYFEKGDYNKCRELCEKAIEVGR 69 (131)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhccHHHHHHHHHHHHhhcc
Confidence 3678888888888888888888877654
No 65
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=23.09 E-value=83 Score=24.26 Aligned_cols=24 Identities=8% Similarity=0.284 Sum_probs=13.0
Q ss_pred HHHHHHHHcCChHHHHHHHHHHHH
Q psy2472 435 YIAESLAALRRWRDCVALYSRATA 458 (571)
Q Consensus 435 ~lA~~y~~~~k~~EAlaL~~ra~~ 458 (571)
.+|..|...|+|.+|+.+|.++..
T Consensus 14 ~~~~~~~~~~~~~~A~~~~~~~~~ 37 (125)
T 1na0_A 14 NLGNAYYKQGDYDEAIEYYQKALE 37 (125)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHH
Confidence 455555555555555555555543
No 66
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=22.77 E-value=1.3e+02 Score=25.55 Aligned_cols=55 Identities=15% Similarity=0.094 Sum_probs=0.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhhcCChhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHH
Q psy2472 126 FHLVSRLRKAASYAVQLQTLCEAEVCDARTKLEAQAYVSWIVGVLHFELKLWKSAMKNLKEAQVVY 191 (571)
Q Consensus 126 ~h~~~RLkKA~~~A~~L~~l~~~~~~d~~t~lEa~AY~~~i~G~l~~E~~~W~~Al~~~~~ar~iy 191 (571)
+....++.+|+.+..+.+++..+. +.+.+..|.+++..++|++|+..|..+-.+.
T Consensus 55 ~~~~g~~~~A~~~~~~al~~~p~~-----------~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~ 109 (164)
T 3sz7_A 55 YSASGQHEKAAEDAELATVVDPKY-----------SKAWSRLGLARFDMADYKGAKEAYEKGIEAE 109 (164)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCTTC-----------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHccCHHHHHHHHHHHHHhCCCC-----------HHHHHHHHHHHHHccCHHHHHHHHHHHHHhC
No 67
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=22.73 E-value=3.2e+02 Score=24.39 Aligned_cols=67 Identities=19% Similarity=0.075 Sum_probs=47.2
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcCChhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhh
Q psy2472 128 LVSRLRKAASYAVQLQTLCEAEVCDARTKLEAQAYVSWIVGVLHFELKLWKSAMKNLKEAQVVYEKLMSA 197 (571)
Q Consensus 128 ~~~RLkKA~~~A~~L~~l~~~~~~d~~t~lEa~AY~~~i~G~l~~E~~~W~~Al~~~~~ar~iy~~L~~~ 197 (571)
..+++.+|..+..+..+++.... ..... ..+......|.+++..++|++|++.|..+-.+++.+...
T Consensus 55 ~~g~~~~A~~~~~~al~~~~~~~-~~~~~--~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~ 121 (283)
T 3edt_B 55 DQNKYKEAAHLLNDALAIREKTL-GKDHP--AVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGK 121 (283)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHHT-CTTCH--HHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCT
T ss_pred HcccHHHHHHHHHHHHHHHHHHc-CCcch--HHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHcCC
Confidence 45677888888888888764321 11111 223344567899999999999999999998888776543
No 68
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=22.53 E-value=2.3e+02 Score=22.49 Aligned_cols=29 Identities=17% Similarity=0.445 Sum_probs=26.0
Q ss_pred HHHHHHHHHcCChHHHHHHHHHHHHHHHh
Q psy2472 434 FYIAESLAALRRWRDCVALYSRATAYASD 462 (571)
Q Consensus 434 ~~lA~~y~~~~k~~EAlaL~~ra~~~~~~ 462 (571)
+.+|.+|...|+|.+|+..|.++......
T Consensus 81 ~~l~~~~~~~~~~~~A~~~~~~a~~~~p~ 109 (137)
T 3q49_B 81 FFLGQCQLEMESYDEAIANLQRAYSLAKE 109 (137)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHChh
Confidence 36899999999999999999999988764
No 69
>3r9m_A BRO1 domain-containing protein BROX; protein binding; 1.95A {Homo sapiens} PDB: 3um3_A 3zxp_A 3um2_A 3um1_A 3uly_A 3um0_A
Probab=22.18 E-value=5.2e+02 Score=26.20 Aligned_cols=70 Identities=23% Similarity=0.202 Sum_probs=45.5
Q ss_pred chhhHHHHHHHHHHHHHHHHHHH---Hhh----hcCChhHHHHHH-----HHHHHHHHHHHHHHHhHHHHHHHHHHHHHH
Q psy2472 123 RKKFHLVSRLRKAASYAVQLQTL---CEA----EVCDARTKLEAQ-----AYVSWIVGVLHFELKLWKSAMKNLKEAQVV 190 (571)
Q Consensus 123 r~R~h~~~RLkKA~~~A~~L~~l---~~~----~~~d~~t~lEa~-----AY~~~i~G~l~~E~~~W~~Al~~~~~ar~i 190 (571)
..+.+++.|| |.+.++...+. +++ ...+|...+++. |++.|-.|....|.+++-+|+..|..|...
T Consensus 205 ~~k~~liAKL--a~q~~~~Y~~a~~~l~~~~~~i~~~W~~~v~~K~~~~~A~A~y~~a~~~~~~~k~GeaIa~L~~A~~~ 282 (376)
T 3r9m_A 205 KHAPGLIAAL--AYETANFYQKADHTLSSLEPAYSAKWRKYLHLKMCFYTAYAYCYHGETLLASDKCGEAIRSLQEAEKL 282 (376)
T ss_dssp TCCHHHHHHH--HHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred CCChHHHHHH--HHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHH
Confidence 3456789998 34433333332 221 112466777776 777788888888888888888888888776
Q ss_pred HHHH
Q psy2472 191 YEKL 194 (571)
Q Consensus 191 y~~L 194 (571)
+..-
T Consensus 283 l~~a 286 (376)
T 3r9m_A 283 YAKA 286 (376)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6544
No 70
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=21.90 E-value=1.4e+02 Score=26.18 Aligned_cols=26 Identities=8% Similarity=0.130 Sum_probs=22.1
Q ss_pred HHHHHHHHHcCChHHHHHHHHHHHHH
Q psy2472 434 FYIAESLAALRRWRDCVALYSRATAY 459 (571)
Q Consensus 434 ~~lA~~y~~~~k~~EAlaL~~ra~~~ 459 (571)
+.+|.+|...|+|.+|+..|.++...
T Consensus 92 ~~la~~~~~~~~~~~A~~~~~~al~~ 117 (198)
T 2fbn_A 92 LNLATCYNKNKDYPKAIDHASKVLKI 117 (198)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHh
Confidence 47888899999999999999888775
No 71
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=21.51 E-value=2.9e+02 Score=22.45 Aligned_cols=55 Identities=13% Similarity=0.084 Sum_probs=26.9
Q ss_pred HHHHHHHHHHHHHHHHHhhhcCChhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHH
Q psy2472 130 SRLRKAASYAVQLQTLCEAEVCDARTKLEAQAYVSWIVGVLHFELKLWKSAMKNLKEAQVVYEK 193 (571)
Q Consensus 130 ~RLkKA~~~A~~L~~l~~~~~~d~~t~lEa~AY~~~i~G~l~~E~~~W~~Al~~~~~ar~iy~~ 193 (571)
++..+|..+-.+..++.. . +. .++..+-.|...+..++|++|++.+..+..+++.
T Consensus 95 ~~~~~A~~~~~~a~~~~p--~-~~------~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~ 149 (166)
T 1a17_A 95 GKFRAALRDYETVVKVKP--H-DK------DAKMKYQECNKIVKQKAFERAIAGDEHKRSVVDS 149 (166)
T ss_dssp TCHHHHHHHHHHHHHHST--T-CH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHhCC--C-CH------HHHHHHHHHHHHHHHHHHHHHHHcccchHHHhcc
Confidence 345555555555554421 1 11 1233334444455566666666666665555543
No 72
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=21.21 E-value=93 Score=24.50 Aligned_cols=26 Identities=19% Similarity=0.367 Sum_probs=23.0
Q ss_pred HHHHHHHHHcCChHHHHHHHHHHHHH
Q psy2472 434 FYIAESLAALRRWRDCVALYSRATAY 459 (571)
Q Consensus 434 ~~lA~~y~~~~k~~EAlaL~~ra~~~ 459 (571)
+.+|.+|...|+|.+|+..|.++...
T Consensus 88 ~~la~~~~~~~~~~~A~~~~~~~~~~ 113 (133)
T 2lni_A 88 TRKAAALEAMKDYTKAMDVYQKALDL 113 (133)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHh
Confidence 46899999999999999999988764
No 73
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=21.11 E-value=95 Score=24.14 Aligned_cols=26 Identities=23% Similarity=0.327 Sum_probs=23.2
Q ss_pred HHHHHHHHHcCChHHHHHHHHHHHHH
Q psy2472 434 FYIAESLAALRRWRDCVALYSRATAY 459 (571)
Q Consensus 434 ~~lA~~y~~~~k~~EAlaL~~ra~~~ 459 (571)
+.+|.+|...|+|.+|+..|.++...
T Consensus 84 ~~~~~~~~~~~~~~~A~~~~~~~~~~ 109 (131)
T 2vyi_A 84 GRMGLALSSLNKHVEAVAYYKKALEL 109 (131)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHhc
Confidence 57899999999999999999998765
No 74
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=20.92 E-value=60 Score=25.97 Aligned_cols=26 Identities=12% Similarity=0.005 Sum_probs=21.8
Q ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHH
Q psy2472 162 YVSWIVGVLHFELKLWKSAMKNLKEA 187 (571)
Q Consensus 162 Y~~~i~G~l~~E~~~W~~Al~~~~~a 187 (571)
-+.++.|..+|+.++|..|+..+...
T Consensus 44 rA~~~lg~~~~~~g~y~~Ai~~w~~~ 69 (93)
T 3bee_A 44 AALSLIANDHFISFRFQEAIDTWVLL 69 (93)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 45678899999999999999877653
No 75
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=20.60 E-value=77 Score=32.00 Aligned_cols=66 Identities=12% Similarity=0.088 Sum_probs=41.9
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcCChhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHH
Q psy2472 128 LVSRLRKAASYAVQLQTLCEAEVCDARTKLEAQAYVSWIVGVLHFELKLWKSAMKNLKEAQVVYEKLM 195 (571)
Q Consensus 128 ~~~RLkKA~~~A~~L~~l~~~~~~d~~t~lEa~AY~~~i~G~l~~E~~~W~~Al~~~~~ar~iy~~L~ 195 (571)
..++..+|+.+=.+=+++......+....--+.+|.. .|.+++.+++|++|+..|..+..|+..+.
T Consensus 63 ~~G~~~eAl~~~~kAl~~~~~~~~~~~~~~~~~~~~n--la~~y~~~g~~~~A~~~~~ka~~i~~~~~ 128 (472)
T 4g1t_A 63 LKGQNEAALECLRKAEELIQQEHADQAEIRSLVTWGN--YAWVYYHMGRLSDVQIYVDKVKHVCEKFS 128 (472)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHHSGGGCTTTTHHHHHH--HHHHHHHTTCHHHHHHHHHHHHHHHHHSC
T ss_pred HCCCHHHHHHHHHHHHHHHHhcCccccchHHHHHHHH--HHHHHHHcCChHHHHHHHHHHHHHhHhcc
Confidence 4456667777766666665433211111101223433 48889999999999999999988877654
No 76
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=20.36 E-value=1e+02 Score=23.70 Aligned_cols=26 Identities=8% Similarity=0.327 Sum_probs=21.2
Q ss_pred HHHHHHHHHcCChHHHHHHHHHHHHH
Q psy2472 434 FYIAESLAALRRWRDCVALYSRATAY 459 (571)
Q Consensus 434 ~~lA~~y~~~~k~~EAlaL~~ra~~~ 459 (571)
+.+|.+|...|+|.+|+.+|.++...
T Consensus 47 ~~la~~~~~~~~~~~A~~~~~~~~~~ 72 (125)
T 1na0_A 47 YNLGNAYYKQGDYDEAIEYYQKALEL 72 (125)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHh
Confidence 46788888889999999988888653
Done!