Your job contains 1 sequence.
>psy2472
MVTEGNIAENEDNAVKVQPKETPAAKPKVVYTIEILKIIKDAQQQHGLRHGDYQRYRGYC
TRRIRRLRKTLHLPQGDKRHFKKREVTEQHLKDEKFIYIPLMLAERAWGYAMQLRQEANT
EPRKKFHLVSRLRKAASYAVQLQTLCEAEVCDARTKLEAQAYVSWIVGVLHFELKLWKSA
MKNLKEAQVVYEKLMSALNEEDALLYKQKVEELTPSLRYCAYNIGDQAGIEDLMQLRSQT
HGDLLHSLDSLMIQSKEHSAEVLSEVSWRGRSVAVRSERVRVFLLAERSLDASLGQAGAD
KIELLESHLMDCKDAIQVIKEEVKQDPNSKNRTQGSGLSSLQYLHSYLMYIRLERTIQRN
LLLAQQAKDNLKTAGNGQQPSEGKKTRPQDLVRLYEIILQNLGELQQLSGMEDDAQYQES
VEVRTKTYKAFRCFYIAESLAALRRWRDCVALYSRATAYASDAASSLPSSGELATLKPEL
ATLEAAIDSNKYSALAYSVLGTEGTPDTEPGTVAKPGAKLKKVPLAERLGEYYEDPSLAS
KSPNVIKLPPDMQPIPAKPLFFDLAQNQLEF
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy2472
(571 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0035947 - symbol:Srp68 "Signal recognition particl... 1374 1.9e-140 1
ZFIN|ZDB-GENE-040831-3 - symbol:srp68 "signal recognition... 1147 2.1e-116 1
UNIPROTKB|F1P0P4 - symbol:SRP68 "Uncharacterized protein"... 1146 2.7e-116 1
MGI|MGI:1917447 - symbol:Srp68 "signal recognition partic... 1134 5.0e-115 1
UNIPROTKB|A6QQW3 - symbol:SRP68 "Uncharacterized protein"... 1133 6.4e-115 1
UNIPROTKB|F1PI42 - symbol:SRP68 "Signal recognition parti... 1131 1.0e-114 1
UNIPROTKB|Q00004 - symbol:SRP68 "Signal recognition parti... 1131 1.0e-114 1
UNIPROTKB|Q9UHB9 - symbol:SRP68 "Signal recognition parti... 1127 2.8e-114 1
UNIPROTKB|F1RW08 - symbol:SRP68 "Uncharacterized protein"... 1117 3.2e-113 1
UNIPROTKB|G3V1U4 - symbol:SRP68 "Signal recognition parti... 988 2.4e-108 2
RGD|1305376 - symbol:Srp68 "signal recognition particle 6... 987 5.0e-108 2
UNIPROTKB|F5H5Y3 - symbol:SRP68 "Signal recognition parti... 1024 2.3e-103 1
TAIR|locus:2156181 - symbol:AT5G61970 species:3702 "Arabi... 593 1.1e-57 1
WB|WBGene00010097 - symbol:F55C5.8 species:6239 "Caenorha... 576 6.8e-56 1
ASPGD|ASPL0000011229 - symbol:AN4043 species:162425 "Emer... 229 9.9e-32 2
DICTYBASE|DDB_G0285821 - symbol:srp68 "signal recognition... 278 5.2e-31 2
UNIPROTKB|G4NF58 - symbol:MGG_04190 "Uncharacterized prot... 180 4.2e-21 2
POMBASE|SPCC1682.05c - symbol:srp68 "signal recognition p... 154 1.3e-07 1
>FB|FBgn0035947 [details] [associations]
symbol:Srp68 "Signal recognition particle protein 68"
species:7227 "Drosophila melanogaster" [GO:0005786 "signal
recognition particle, endoplasmic reticulum targeting"
evidence=ISS] [GO:0008312 "7S RNA binding" evidence=ISS]
[GO:0006614 "SRP-dependent cotranslational protein targeting to
membrane" evidence=ISS] [GO:0003729 "mRNA binding" evidence=ISS]
[GO:0005047 "signal recognition particle binding" evidence=IEA]
[GO:0030942 "endoplasmic reticulum signal peptide binding"
evidence=IEA] InterPro:IPR026258 PIRSF:PIRSF038995 EMBL:AE014296
GO:GO:0008312 GO:GO:0006614 GO:GO:0005786 GO:GO:0005047
GO:GO:0030942 eggNOG:NOG325632 GeneTree:ENSGT00390000011856
KO:K03107 CTD:6730 EMBL:AY058698 RefSeq:NP_648273.1 UniGene:Dm.899
DIP:DIP-22114N IntAct:Q9VSS2 MINT:MINT-825472 STRING:Q9VSS2
PaxDb:Q9VSS2 PRIDE:Q9VSS2 EnsemblMetazoa:FBtr0076517 GeneID:39028
KEGG:dme:Dmel_CG5064 UCSC:CG5064-RA FlyBase:FBgn0035947
InParanoid:Q9VSS2 OMA:KAAMEAF OrthoDB:EOG4WPZHW PhylomeDB:Q9VSS2
GenomeRNAi:39028 NextBio:811546 Bgee:Q9VSS2 GermOnline:CG5064
Uniprot:Q9VSS2
Length = 604
Score = 1374 (488.7 bits), Expect = 1.9e-140, P = 1.9e-140
Identities = 293/577 (50%), Positives = 382/577 (66%)
Query: 7 IAENEDNAVKVQPK-ET-PAAKPKVVYTIEILKIIKDAQQQHGLRHGDYQXXXXXXXXXX 64
+ E+ N VQ K ET P A+P ++T+EIL +IKDAQQQHGLRHGD+Q
Sbjct: 3 VQEDNPNTGDVQEKTETAPVAEPSKIFTVEILHMIKDAQQQHGLRHGDFQRYRGYCSRRI 62
Query: 65 XXXXKTLHLPQGDKRHFKKREVTEQHLK----DEKFIYIPLMLAERAWGYAMQLRQEANT 120
K L PQGDKRHFK+R+VT L DE+FI+IPL+ AERAW YAMQL+QE+NT
Sbjct: 63 RRLRKALKYPQGDKRHFKRRDVTIGQLTGKKADERFIHIPLICAERAWAYAMQLKQESNT 122
Query: 121 EPRKKFHLVSRLRKAASYAVQLQTLCEAEVCDARTKLEAQAYVSWIVGVLHFELKLWKSA 180
EPRK+FHLV++LR+A YA+QLQ LC E DARTKLE +AYV+W+ G LHFEL+LWK+A
Sbjct: 123 EPRKRFHLVNKLRRACFYALQLQELCNTEAFDARTKLECEAYVAWMHGTLHFELQLWKTA 182
Query: 181 MKNLKEAQVVYEKLMSALNEEDALLYKQKVEELTPSLRYCAYNI-GDQAG--IEDLMQLR 237
++LK AQVVYE L AL E++ LY+ KV E TP+LRYCAYNI G +G I+++++LR
Sbjct: 183 GEHLKRAQVVYENLGKALPEDEQELYRAKVNEFTPNLRYCAYNISGGASGGKIDEILELR 242
Query: 238 SQTHGDLLHSLDSLMIQSKEHSAEVLSEVSWXXXXXXXXXXXXXXFLLAERSLDASLGQA 297
+Q +L +LD L+ Q+K S+E L + W FLL+ + LD SL +
Sbjct: 243 AQ---GVLENLDVLVSQTKTESSEGLQTIDWRGRKVTVRPEKVRLFLLSAQELDKSLAKT 299
Query: 298 GAD--KIELLESHLMDCKDAIQVIKEEVKQDPNSKNRTQGSGLSSLQYLHSYLMYIRLER 355
KIEL+E LMDCKDAIQ +++E+KQDP ++ T G +S +QYL +YL YIR R
Sbjct: 300 TKQDAKIELIERILMDCKDAIQAVRDEIKQDPKLRSLTTGQTVSGVQYLLAYLSYIRHSR 359
Query: 356 TIQRNLLLAQQAKDNLKTAG--NGQQPSEGKKTRPQDLVRLYEIILQNLGELQQLSGMED 413
T+QRNL L +QAK N + Q +GK+ RPQDL RLYEIILQN+ E+QQ++G+ED
Sbjct: 360 TLQRNLCLVEQAKLNFYDPNLQSQQNVGDGKRVRPQDLARLYEIILQNVTEMQQINGLED 419
Query: 414 DAQYQESVEVRTKTYKAFRCFYIAESLAALRRWRDCVALYSRATAYASDAASSLPSSGEL 473
DA YQ VE T+KAFRC+YIA +L +++W++ VALY RA+ YA++A SS E
Sbjct: 420 DATYQSEVENLAITFKAFRCYYIALTLIDIKKWKEAVALYERASNYATEALKG-KSSPEF 478
Query: 474 ATLKPELATLEAAIDSNKYSALAYSVLXXXXXXXXXXXXVAKPGAKLKKVPLAERLGEYY 533
L+ EL + +AID K+SA AYSVL ++ K PL ERL Y
Sbjct: 479 Q-LQEELKKVVSAIDGCKFSAHAYSVLEDDNSEESGTTTKSQKTTK----PLYERLSLYK 533
Query: 534 EDPSLASKSPNVIKLPPDMQPIPAKPLFFDLAQNQLE 570
ED SL +K+PNV KL PDM+PIP KP+FFDLA +E
Sbjct: 534 EDQSLHTKAPNVFKLTPDMEPIPCKPIFFDLAMTYVE 570
>ZFIN|ZDB-GENE-040831-3 [details] [associations]
symbol:srp68 "signal recognition particle 68"
species:7955 "Danio rerio" [GO:0005047 "signal recognition particle
binding" evidence=IEA] [GO:0008312 "7S RNA binding" evidence=IEA]
[GO:0005786 "signal recognition particle, endoplasmic reticulum
targeting" evidence=IEA] [GO:0030942 "endoplasmic reticulum signal
peptide binding" evidence=IEA] [GO:0006614 "SRP-dependent
cotranslational protein targeting to membrane" evidence=IEA]
InterPro:IPR026258 PIRSF:PIRSF038995 ZFIN:ZDB-GENE-040831-3
GO:GO:0008312 GO:GO:0006614 GO:GO:0005786 GO:GO:0005047
GO:GO:0030942 GeneTree:ENSGT00390000011856 EMBL:CR450715
IPI:IPI00495779 Ensembl:ENSDART00000124948 Bgee:F1QI99
Uniprot:F1QI99
Length = 617
Score = 1147 (408.8 bits), Expect = 2.1e-116, P = 2.1e-116
Identities = 246/572 (43%), Positives = 343/572 (59%)
Query: 11 EDNAVKVQPKETPAAKPKVVYTI--EILKIIKDAQQQHGLRHGDYQXXXXXXXXXXXXXX 68
E N VK+ P + + +I EIL+IIKD+QQQHGLRHGDYQ
Sbjct: 28 EQNGVKM-PSTEENKENSIDQSIGLEILQIIKDSQQQHGLRHGDYQRYRGYCSRRLRRLR 86
Query: 69 KTLHLPQGDKRHFKKREVTEQHLKDEKFIYIPLMLAERAWGYAMQLRQEANTEPRKKFHL 128
K L G++ F ++VT + L D +++ + LM AERAW YAMQL+QEANTEPRK+FHL
Sbjct: 87 KALGFKMGNRHKFTGKKVTVEMLSDNRYLLLVLMEAERAWSYAMQLKQEANTEPRKRFHL 146
Query: 129 VSRLRKAASYAVQLQTLCEAEVCDARTKLEAQAYVSWIVGVLHFELKLWKSAMKNLKEAQ 188
+ RLRKAA + QL+ LCE+ DA+TKLEAQAY +++ G++ FEL+ WKSAM+ +
Sbjct: 147 LGRLRKAAKHGDQLEKLCESPNVDAKTKLEAQAYTAYLTGMVQFELQEWKSAMEAFNNCK 206
Query: 189 VVYEKLMSALNEEDALLYKQKVEELTPSLRYCAYNIGDQAGIEDLMQLRSQTHGD---LL 245
+YEKL SA EE A+LY Q+VEE++P++RYCAYNIGDQ I DLMQ+R G +
Sbjct: 207 TIYEKLASAFTEEQAVLYHQRVEEISPNIRYCAYNIGDQNAINDLMQMRLSAGGGGGMMA 266
Query: 246 HSLDSLMIQSKEHSAEVLSEVSWXXXXXXXXXXXXXXFLLAERSLDASLGQAGAD--KIE 303
L+SL+ Q++ A V+SEV W FLL +A++ QA + K
Sbjct: 267 EKLESLITQTRAKQAAVMSEVEWRGRTVPIKIDKARIFLLGLADNEAAITQADNEETKEH 326
Query: 304 LLESHLMDCKDAIQVIKEEVKQDPNSKNRT----QGSGLSSLQYLHSYLMYIRLERTIQR 359
L ES L +C+D IQ ++EE++ D + R + S +S+LQYLHSYL YI+L ++R
Sbjct: 327 LYESLLAECRDTIQAVREELRTDVKQRERATDVAESSKVSNLQYLHSYLTYIKLWTVVKR 386
Query: 360 NLLLAQQAKDNLKTAGNGQQPSEGKK-TRPQDLVRLYEIILQNLGELQQLSGMEDDAQYQ 418
N +A + LK Q E K+ RPQDL+RLY+IILQ+L EL L G+E+D +Q
Sbjct: 387 NESMAHSLQTKLKEP----QTDENKRGPRPQDLIRLYDIILQSLAELSSLQGLEEDHTFQ 442
Query: 419 ESVEVRTKTYKAFRCFYIAESLAALRRWRDCVALYSRATAYASDAASSLPS-SGELATLK 477
+ + ++T YKA+RCFYIA+S +++W + + LY R Y + S S S L L
Sbjct: 443 KELSLKTLVYKAYRCFYIAQSYVLVKKWSEALVLYERVLKYTKEVQSKAKSLSNNLKDL- 501
Query: 478 PELATLEAAIDSNKYSALAYSVLXXXXXXXXXXXXVAKPGAKLKKVPLAERLGEYYEDPS 537
P++ L A +++ KYS A ++L K PL++RL + D +
Sbjct: 502 PDVQELIAEVNAEKYSLQAAAILDTEDIAELPSQQQIKD-----TTPLSDRLDNFRLDSN 556
Query: 538 LASKSPNVIKLPPDMQPIPAKPLFFDLAQNQL 569
L SK PN+++ PPD QPIP KPLFFDLA N +
Sbjct: 557 LLSKQPNLVQFPPDFQPIPCKPLFFDLALNHV 588
>UNIPROTKB|F1P0P4 [details] [associations]
symbol:SRP68 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005047 "signal recognition particle binding"
evidence=IEA] [GO:0005786 "signal recognition particle, endoplasmic
reticulum targeting" evidence=IEA] [GO:0006614 "SRP-dependent
cotranslational protein targeting to membrane" evidence=IEA]
[GO:0008312 "7S RNA binding" evidence=IEA] [GO:0030942 "endoplasmic
reticulum signal peptide binding" evidence=IEA] [GO:0042493
"response to drug" evidence=IEA] InterPro:IPR026258
PIRSF:PIRSF038995 GO:GO:0042493 GO:GO:0008312 GO:GO:0006614
GO:GO:0005786 GO:GO:0005047 GO:GO:0030942
GeneTree:ENSGT00390000011856 OMA:KAAMEAF EMBL:AADN02029956
IPI:IPI00574214 Ensembl:ENSGALT00000003210 Uniprot:F1P0P4
Length = 602
Score = 1146 (408.5 bits), Expect = 2.7e-116, P = 2.7e-116
Identities = 247/579 (42%), Positives = 360/579 (62%)
Query: 5 GNIAENEDNAVKVQPKETPAAKPKVVYTIEILKIIKDAQQQHGLRHGDYQXXXXXXXXXX 64
G EN++N +P T A +EIL+I+K++QQQHGLRHGD+Q
Sbjct: 10 GGAEENKENE---RPAGTRADGLSDSLGLEILQIVKESQQQHGLRHGDFQRYRGYCSRRL 66
Query: 65 XXXXKTLHLPQGDKRHFKKREVTEQHLKDEKFIYIPLMLAERAWGYAMQLRQEANTEPRK 124
KTL+ G++ F ++VTE+ L D +++ + LM AERAW YAMQL+QEANTEPRK
Sbjct: 67 RRLRKTLNFKMGNRHKFTGKKVTEEILSDNRYLLLILMDAERAWSYAMQLKQEANTEPRK 126
Query: 125 KFHLVSRLRKAASYAVQLQTLCEAEVCDARTKLEAQAYVSWIVGVLHFELKLWKSAMKNL 184
+FHL+SRLRKA +A +L+ LCE+ DA+TKLEAQAY++++ G+L FE + WK+AM+
Sbjct: 127 RFHLLSRLRKAVKHAEELERLCESNRVDAKTKLEAQAYMAYLTGMLRFEHQEWKAAMEAF 186
Query: 185 KEAQVVYEKLMSALNEEDALLYKQKVEELTPSLRYCAYNIGDQAGIEDLMQLRSQ---TH 241
+ + +YEKL +A EE A+LY Q+VEE++P++RYCAYNIGDQ+ + +LMQ+R + T
Sbjct: 187 NKCKTIYEKLANAFTEEQAVLYNQRVEEISPNIRYCAYNIGDQSAMNELMQMRLRSGGTE 246
Query: 242 GDLLHSLDSLMIQSKEHSAEVLSEVSWXXXXXXXXXXXXXXFLLAERSLDASLGQAGADK 301
G L L++L+ Q++ A +SEV W FLL +A++ QA ++
Sbjct: 247 GLLAEKLEALITQTRAKQAATMSEVEWRGRTVPVKIDKVRIFLLGLADNEAAIVQAENEE 306
Query: 302 IE--LLESHLMDCKDAIQVIKEEVKQDPNSKNRT-QG-SG-LSSLQYLHSYLMYIRLERT 356
L ES L +C+DAIQ ++E++K D + + +G SG +S++QYLHSYL YI+L
Sbjct: 307 TRERLFESLLSECRDAIQAVREDLKPDQKQREHSLEGDSGKVSNIQYLHSYLTYIKLSTA 366
Query: 357 IQRNLLLAQQAKDNLKTAGNGQQPSE--GKKT-RPQDLVRLYEIILQNLGELQQLSGMED 413
I+RN +A+ +L+ A QQ SE GK+T RPQDL+RLY+IILQNL EL QL G+E+
Sbjct: 367 IKRNESMAK----SLQKALLQQQRSEEDGKRTPRPQDLIRLYDIILQNLVELTQLPGLEE 422
Query: 414 DAQYQESVEVRTKTYKAFRCFYIAESLAALRRWRDCVALYSRATAYASDAASSLPS-SGE 472
D +Q+ + ++T YKA+RCF+IA+S +++W + + LY R YA + S + +
Sbjct: 423 DKSFQKEIGLKTLVYKAYRCFFIAQSYVLVKKWSEALVLYERVLKYAGEVQSGAGAFTNS 482
Query: 473 LATLKPELATLEAAIDSNKYSALAYSVLXXXXXXXXXXXXVAKPGAKLKKVPLAERLGEY 532
L L P++ L +++ KYS A ++L K G PL+ER +
Sbjct: 483 LKEL-PDVQDLITQVNAEKYSLQAAAILDANDNHETESPSQVKDGK-----PLSERFETF 536
Query: 533 YEDPSLASKSPNVIKLPPDMQPIPAKPLFFDLAQNQLEF 571
DPSL SK +++ PP QPIP KPLFFDLA N + F
Sbjct: 537 CLDPSLVSKQVSLVHFPPGFQPIPCKPLFFDLALNHVAF 575
>MGI|MGI:1917447 [details] [associations]
symbol:Srp68 "signal recognition particle 68" species:10090
"Mus musculus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005047
"signal recognition particle binding" evidence=ISO] [GO:0005634
"nucleus" evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005786 "signal
recognition particle, endoplasmic reticulum targeting"
evidence=ISO] [GO:0006614 "SRP-dependent cotranslational protein
targeting to membrane" evidence=IEA] [GO:0008312 "7S RNA binding"
evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
[GO:0030942 "endoplasmic reticulum signal peptide binding"
evidence=IEA] [GO:0042493 "response to drug" evidence=ISO]
InterPro:IPR026258 PIRSF:PIRSF038995 MGI:MGI:1917447 GO:GO:0005730
GO:GO:0042493 EMBL:CH466558 EMBL:AL669925 GO:GO:0008312
EMBL:AL645861 GO:GO:0006614 GO:GO:0005786 GO:GO:0005047
GO:GO:0030942 eggNOG:NOG325632 GeneTree:ENSGT00390000011856
KO:K03107 CTD:6730 HOGENOM:HOG000231195 HOVERGEN:HBG059793
OrthoDB:EOG4V9TQB OMA:KAAMEAF EMBL:AK033010 EMBL:BC070422
IPI:IPI00222977 RefSeq:NP_666144.3 UniGene:Mm.29655
ProteinModelPortal:Q8BMA6 STRING:Q8BMA6 PhosphoSite:Q8BMA6
PaxDb:Q8BMA6 PRIDE:Q8BMA6 Ensembl:ENSMUST00000021133 GeneID:217337
KEGG:mmu:217337 InParanoid:A2AAN1 NextBio:375773 Bgee:Q8BMA6
CleanEx:MM_SRP68 Genevestigator:Q8BMA6
GermOnline:ENSMUSG00000020780 Uniprot:Q8BMA6
Length = 625
Score = 1134 (404.2 bits), Expect = 5.0e-115, P = 5.0e-115
Identities = 246/580 (42%), Positives = 351/580 (60%)
Query: 5 GNIAENEDNAVKVQPKETPAAKPKV--VYTIEILKIIKDAQQQHGLRHGDYQXXXXXXXX 62
G A ++N +P A + ++EIL+IIK++QQQHGLRHGD+Q
Sbjct: 29 GRSAGGDENKENERPSAGSKANKEFGDSLSLEILQIIKESQQQHGLRHGDFQRYRGYCSR 88
Query: 63 XXXXXXKTLHLPQGDKRHFKKREVTEQHLKDEKFIYIPLMLAERAWGYAMQLRQEANTEP 122
KTL+ G++ F ++VTE+ L D +++ + LM AERAW YAMQL+QEANTEP
Sbjct: 89 RQRRLRKTLNFKMGNRHKFTGKKVTEELLTDNRYLLLVLMDAERAWSYAMQLKQEANTEP 148
Query: 123 RKKFHLVSRLRKAASYAVQLQTLCEAEVCDARTKLEAQAYVSWIVGVLHFELKLWKSAMK 182
RK+FHL+SRLRKA +A +L+ LCE+ DA+TKLEAQAY +++ G+L FE + WKSA++
Sbjct: 149 RKRFHLLSRLRKAVKHAEELERLCESNRVDAKTKLEAQAYTAYLSGMLRFEHQEWKSAIE 208
Query: 183 NLKEAQVVYEKLMSALNEEDALLYKQKVEELTPSLRYCAYNIGDQAGIEDLMQLRSQ--- 239
+ + +YEKL SA EE A+LY Q+VEE++P++RYCAYNIGDQ+ I +LMQ+R +
Sbjct: 209 AFNKCKTIYEKLASAFTEEQAVLYNQRVEEISPNIRYCAYNIGDQSAINELMQMRLRSGG 268
Query: 240 THGDLLHSLDSLMIQSKEHSAEVLSEVSWXXXXXXXXXXXXXXFLLAERSLDASLGQAGA 299
T G L L++L+ Q++ A +SEV W FLL +A++ QA +
Sbjct: 269 TEGLLAEKLEALITQTRAKQAATMSEVEWRGRTVPVKIDKVRIFLLGLADNEAAIVQAES 328
Query: 300 D--KIELLESHLMDCKDAIQVIKEEVKQDPNSKNRT-QG-SG-LSSLQYLHSYLMYIRLE 354
+ K L ES L +C+DA+Q ++EE+K D ++ G SG +S+LQYLHSYL YI+L
Sbjct: 329 EETKERLFESMLSECRDALQAVREELKPDQKQRDYALDGESGKVSNLQYLHSYLTYIKLS 388
Query: 355 RTIQRNLLLAQQAKDNLKTAGNGQQPSEGKKT--RPQDLVRLYEIILQNLGELQQLSGME 412
I+RN +A+ L A QQP + K RPQDL+RLY+IILQNL EL QL G+E
Sbjct: 389 TAIRRNENMAK----GLHRALLQQQPEDDSKRSPRPQDLIRLYDIILQNLVELLQLPGLE 444
Query: 413 DDAQYQESVEVRTKTYKAFRCFYIAESLAALRRWRDCVALYSRATAYASDAAS-SLPSSG 471
+D +Q+ + ++T +KA+RCF+IA+S +++W + + LY R YA++ +S S
Sbjct: 445 EDRTFQKEISLKTLVFKAYRCFFIAQSYVLVKKWSEALVLYDRVLKYANEVSSHGGASKN 504
Query: 472 ELATLKPELATLEAAIDSNKYSALAYSVLXXXXXXXXXXXXVAKPGAKLKKVPLAERLGE 531
L L P++ L + S K S A ++L K PL ER
Sbjct: 505 SLKDL-PDVQELITQVRSEKCSLQAAAILDANDSHQTDTSSQVKDNT-----PLVERFES 558
Query: 532 YYEDPSLASKSPNVIKLPPDMQPIPAKPLFFDLAQNQLEF 571
+ DPSL +K N++ PP QPIP KPLFFDLA N + F
Sbjct: 559 FCLDPSLVTKQANLVHFPPGFQPIPCKPLFFDLALNHVAF 598
>UNIPROTKB|A6QQW3 [details] [associations]
symbol:SRP68 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042493 "response to drug" evidence=IEA] [GO:0030942
"endoplasmic reticulum signal peptide binding" evidence=IEA]
[GO:0008312 "7S RNA binding" evidence=IEA] [GO:0006614
"SRP-dependent cotranslational protein targeting to membrane"
evidence=IEA] [GO:0005786 "signal recognition particle, endoplasmic
reticulum targeting" evidence=IEA] [GO:0005047 "signal recognition
particle binding" evidence=IEA] InterPro:IPR026258
PIRSF:PIRSF038995 GO:GO:0042493 GO:GO:0008312 GO:GO:0006614
GO:GO:0005786 GO:GO:0005047 GO:GO:0030942 eggNOG:NOG325632
GeneTree:ENSGT00390000011856 KO:K03107 CTD:6730
HOGENOM:HOG000231195 HOVERGEN:HBG059793 OrthoDB:EOG4V9TQB
OMA:KAAMEAF EMBL:DAAA02049506 EMBL:BC150016 IPI:IPI00914500
RefSeq:NP_001094649.2 UniGene:Bt.59984 STRING:A6QQW3
Ensembl:ENSBTAT00000012161 GeneID:538777 KEGG:bta:538777
InParanoid:A6QQW3 NextBio:20877573 Uniprot:A6QQW3
Length = 623
Score = 1133 (403.9 bits), Expect = 6.4e-115, P = 6.4e-115
Identities = 246/580 (42%), Positives = 348/580 (60%)
Query: 5 GNIAENEDNAVKVQPKETPAAKPKV--VYTIEILKIIKDAQQQHGLRHGDYQXXXXXXXX 62
G A E+N +P A + ++EIL+IIK++QQQHGLRHGD+Q
Sbjct: 27 GRSAGGEENKENERPSAGSKAHKEFGDSLSLEILQIIKESQQQHGLRHGDFQRYRGYCSR 86
Query: 63 XXXXXXKTLHLPQGDKRHFKKREVTEQHLKDEKFIYIPLMLAERAWGYAMQLRQEANTEP 122
KTL+ G++ F ++VTE L D +++ + LM AERAW YAMQL+QEANTEP
Sbjct: 87 RQRRLRKTLNFKMGNRHKFTGKKVTEDLLTDNRYLLLVLMDAERAWSYAMQLKQEANTEP 146
Query: 123 RKKFHLVSRLRKAASYAVQLQTLCEAEVCDARTKLEAQAYVSWIVGVLHFELKLWKSAMK 182
RK+FHL+SRLRKA +A +L+ LCE+ DA+TKLEAQAY +++ G+L FE + WK+A++
Sbjct: 147 RKRFHLLSRLRKAVKHAEELERLCESNRVDAKTKLEAQAYTAYLSGMLRFEHQEWKAAIE 206
Query: 183 NLKEAQVVYEKLMSALNEEDALLYKQKVEELTPSLRYCAYNIGDQAGIEDLMQLRSQ--- 239
+ + +YEKL SA EE A+LY Q+VEE++P++RYCAYNIGDQ+ I +LMQ+R +
Sbjct: 207 AFNKCKTIYEKLASAFTEEQAVLYNQRVEEISPNIRYCAYNIGDQSAINELMQMRLRSGG 266
Query: 240 THGDLLHSLDSLMIQSKEHSAEVLSEVSWXXXXXXXXXXXXXXFLLAERSLDASLGQAGA 299
T G L L++L+ Q++ A +SEV W FLL +A++ QA +
Sbjct: 267 TEGLLAEKLEALITQTRAKQAATMSEVEWRGRTVPVKIDKVRIFLLGLADNEAAIAQAES 326
Query: 300 D--KIELLESHLMDCKDAIQVIKEEVKQDPNSKNRTQG--SG-LSSLQYLHSYLMYIRLE 354
+ K L ES L +C+DAIQ ++EE+K D ++ SG +S+LQYLHSYL YI+L
Sbjct: 327 EETKERLFESMLSECRDAIQAVREELKSDQKQRDYALDVESGKVSNLQYLHSYLTYIKLS 386
Query: 355 RTIQRNLLLAQQAKDNLKTAGNGQQPSEGKKT--RPQDLVRLYEIILQNLGELQQLSGME 412
I+RN +A+ L+ A QQP + K RPQDL+RLY+IILQNL EL QL G+E
Sbjct: 387 TAIKRNENMAK----GLQKALLQQQPEDDSKRAPRPQDLIRLYDIILQNLVELLQLPGLE 442
Query: 413 DDAQYQESVEVRTKTYKAFRCFYIAESLAALRRWRDCVALYSRATAYASDAASSLPS-SG 471
+D +Q+ + ++T YKA+RCF+IA+S +++W + + LY R YA + S +
Sbjct: 443 EDRAFQKEIGLKTLVYKAYRCFFIAQSYVLVKKWNEALVLYDRVLKYADEVNSDAGAFKN 502
Query: 472 ELATLKPELATLEAAIDSNKYSALAYSVLXXXXXXXXXXXXVAKPGAKLKKVPLAERLGE 531
L L P++ L + S K S A ++L K PL ER
Sbjct: 503 SLKDL-PDVQELITQVRSEKCSLQAAAILDTNDAHQTETSSQVKDNK-----PLVERFET 556
Query: 532 YYEDPSLASKSPNVIKLPPDMQPIPAKPLFFDLAQNQLEF 571
+ DPSL +K N++ PP QPIP KPLFFDLA N + F
Sbjct: 557 FCLDPSLVTKQANLVHFPPGFQPIPCKPLFFDLALNHVAF 596
>UNIPROTKB|F1PI42 [details] [associations]
symbol:SRP68 "Signal recognition particle 68 kDa protein"
species:9615 "Canis lupus familiaris" [GO:0030942 "endoplasmic
reticulum signal peptide binding" evidence=IEA] [GO:0008312 "7S RNA
binding" evidence=IEA] [GO:0006614 "SRP-dependent cotranslational
protein targeting to membrane" evidence=IEA] [GO:0005786 "signal
recognition particle, endoplasmic reticulum targeting"
evidence=IEA] [GO:0005047 "signal recognition particle binding"
evidence=IEA] InterPro:IPR026258 PIRSF:PIRSF038995 GO:GO:0008312
GO:GO:0006614 GO:GO:0005786 GO:GO:0005047 GO:GO:0030942
GeneTree:ENSGT00390000011856 OMA:KAAMEAF EMBL:AAEX03006287
Ensembl:ENSCAFT00000008082 Uniprot:F1PI42
Length = 618
Score = 1131 (403.2 bits), Expect = 1.0e-114, P = 1.0e-114
Identities = 247/580 (42%), Positives = 353/580 (60%)
Query: 5 GNIAENEDNAVKVQPKETPAAKPKV--VYTIEILKIIKDAQQQHGLRHGDYQXXXXXXXX 62
G A E+N +P A + ++EIL+IIK++QQQHGLRHGD+Q
Sbjct: 23 GRGAGGEENKENERPSAGSKANREFGDSLSLEILQIIKESQQQHGLRHGDFQRYRGYCSR 82
Query: 63 XXXXXXKTLHLPQGDKRHFKKREVTEQHLKDEKFIYIPLMLAERAWGYAMQLRQEANTEP 122
KTL+ G++ F ++VTE L D +++ + LM AERAW YAMQL+QEANTEP
Sbjct: 83 RQRRLRKTLNFKMGNRHKFTGKKVTEDLLTDNRYLLLVLMDAERAWSYAMQLKQEANTEP 142
Query: 123 RKKFHLVSRLRKAASYAVQLQTLCEAEVCDARTKLEAQAYVSWIVGVLHFELKLWKSAMK 182
RK+FHL+SRLRKA +A +L+ LCE+ DA+TKLEAQAY +++ G+L FE + WK+A++
Sbjct: 143 RKRFHLLSRLRKAVKHAEELERLCESNRVDAKTKLEAQAYTAYLSGMLRFEHQEWKAAIE 202
Query: 183 NLKEAQVVYEKLMSALNEEDALLYKQKVEELTPSLRYCAYNIGDQAGIEDLMQLRSQ--- 239
+ + +YEKL SA EE A+LY Q+VEE++P++RYCAYNIGDQ+ I +LMQ+R +
Sbjct: 203 AFNKCKTIYEKLASAFTEEQAVLYNQRVEEISPNIRYCAYNIGDQSAINELMQMRLRSGG 262
Query: 240 THGDLLHSLDSLMIQSKEHSAEVLSEVSWXXXXXXXXXXXXXXFLLAERSLDASLGQAGA 299
T G L L++L+ Q++ A +SEV W FLL +A++ QA +
Sbjct: 263 TEGLLAEKLEALITQTRAKQAATMSEVEWRGRTVPVKIDKVRIFLLGLADNEAAIAQAES 322
Query: 300 D--KIELLESHLMDCKDAIQVIKEEVKQDPNSKNRT-QG-SG-LSSLQYLHSYLMYIRLE 354
+ K L ES L +C+DAIQ ++EE+K D ++ T G SG +S+LQYLHSYL YI+L
Sbjct: 323 EETKERLFESMLSECRDAIQAVREELKPDQKQRDYTLDGESGKVSNLQYLHSYLTYIKLS 382
Query: 355 RTIQRNLLLAQQAKDNLKTAGNGQQPS-EGKKT-RPQDLVRLYEIILQNLGELQQLSGME 412
I+RN +A+ + L+ QQP E K++ RPQDL+RLY+IILQNL EL QL G+E
Sbjct: 383 TAIRRNENMAKGLQKALQ-----QQPEDESKRSPRPQDLIRLYDIILQNLVELLQLPGLE 437
Query: 413 DDAQYQESVEVRTKTYKAFRCFYIAESLAALRRWRDCVALYSRATAYASDAASSLPS-SG 471
+D +Q+ + ++T +KA+RCF+IA+S +++W + + LY R YA++ S +
Sbjct: 438 EDRAFQKEIGLKTLVFKAYRCFFIAQSYVLVKKWSEALVLYDRVLKYANEVNSDAGAFRN 497
Query: 472 ELATLKPELATLEAAIDSNKYSALAYSVLXXXXXXXXXXXXVAKPGAKLKKVPLAERLGE 531
L L P++ L + S K S A ++L K PL ER
Sbjct: 498 SLKDL-PDVQELITQVRSEKCSLQAAAILDASDSHQPETSSQVKDNK-----PLVERFET 551
Query: 532 YYEDPSLASKSPNVIKLPPDMQPIPAKPLFFDLAQNQLEF 571
+ DPSL +K N++ PP QPIP KPLFFDLA N + F
Sbjct: 552 FCLDPSLVTKQANLVHFPPGFQPIPCKPLFFDLALNHVAF 591
>UNIPROTKB|Q00004 [details] [associations]
symbol:SRP68 "Signal recognition particle 68 kDa protein"
species:9615 "Canis lupus familiaris" [GO:0005829 "cytosol"
evidence=TAS] [GO:0005730 "nucleolus" evidence=IEA] [GO:0042493
"response to drug" evidence=IEA] [GO:0005786 "signal recognition
particle, endoplasmic reticulum targeting" evidence=IEA]
[GO:0030942 "endoplasmic reticulum signal peptide binding"
evidence=IEA] [GO:0008312 "7S RNA binding" evidence=IEA]
[GO:0006614 "SRP-dependent cotranslational protein targeting to
membrane" evidence=IEA] [GO:0005047 "signal recognition particle
binding" evidence=IEA] Reactome:REACT_86357 InterPro:IPR026258
PIRSF:PIRSF038995 GO:GO:0005829 GO:GO:0005730 GO:GO:0042493
GO:GO:0008312 GO:GO:0006614 GO:GO:0005786 Reactome:REACT_146484
GO:GO:0005047 GO:GO:0030942 eggNOG:NOG325632 KO:K03107 EMBL:X53744
PIR:A58947 RefSeq:NP_001003271.2 UniGene:Cfa.3809 STRING:Q00004
PRIDE:Q00004 GeneID:403952 KEGG:cfa:403952 CTD:6730
HOGENOM:HOG000231195 HOVERGEN:HBG059793 InParanoid:Q00004
OrthoDB:EOG4V9TQB NextBio:20817442 Uniprot:Q00004
Length = 622
Score = 1131 (403.2 bits), Expect = 1.0e-114, P = 1.0e-114
Identities = 247/580 (42%), Positives = 353/580 (60%)
Query: 5 GNIAENEDNAVKVQPKETPAAKPKV--VYTIEILKIIKDAQQQHGLRHGDYQXXXXXXXX 62
G A E+N +P A + ++EIL+IIK++QQQHGLRHGD+Q
Sbjct: 27 GRGAGGEENKENERPSAGSKANREFGDSLSLEILQIIKESQQQHGLRHGDFQRYRGYCSR 86
Query: 63 XXXXXXKTLHLPQGDKRHFKKREVTEQHLKDEKFIYIPLMLAERAWGYAMQLRQEANTEP 122
KTL+ G++ F ++VTE L D +++ + LM AERAW YAMQL+QEANTEP
Sbjct: 87 RQRRLRKTLNFKMGNRHKFTGKKVTEDLLTDNRYLLLVLMDAERAWSYAMQLKQEANTEP 146
Query: 123 RKKFHLVSRLRKAASYAVQLQTLCEAEVCDARTKLEAQAYVSWIVGVLHFELKLWKSAMK 182
RK+FHL+SRLRKA +A +L+ LCE+ DA+TKLEAQAY +++ G+L FE + WK+A++
Sbjct: 147 RKRFHLLSRLRKAVKHAEELERLCESNRVDAKTKLEAQAYTAYLSGMLRFEHQEWKAAIE 206
Query: 183 NLKEAQVVYEKLMSALNEEDALLYKQKVEELTPSLRYCAYNIGDQAGIEDLMQLRSQ--- 239
+ + +YEKL SA EE A+LY Q+VEE++P++RYCAYNIGDQ+ I +LMQ+R +
Sbjct: 207 AFNKCKTIYEKLASAFTEEQAVLYNQRVEEISPNIRYCAYNIGDQSAINELMQMRLRSGG 266
Query: 240 THGDLLHSLDSLMIQSKEHSAEVLSEVSWXXXXXXXXXXXXXXFLLAERSLDASLGQAGA 299
T G L L++L+ Q++ A +SEV W FLL +A++ QA +
Sbjct: 267 TEGLLAEKLEALITQTRAKQAATMSEVEWRGRTVPVKIDKVRIFLLGLADNEAAIAQAES 326
Query: 300 D--KIELLESHLMDCKDAIQVIKEEVKQDPNSKNRT-QG-SG-LSSLQYLHSYLMYIRLE 354
+ K L ES L +C+DAIQ ++EE+K D ++ T G SG +S+LQYLHSYL YI+L
Sbjct: 327 EETKERLFESMLSECRDAIQAVREELKPDQKQRDYTLDGESGKVSNLQYLHSYLTYIKLS 386
Query: 355 RTIQRNLLLAQQAKDNLKTAGNGQQPS-EGKKT-RPQDLVRLYEIILQNLGELQQLSGME 412
I+RN +A+ + L+ QQP E K++ RPQDL+RLY+IILQNL EL QL G+E
Sbjct: 387 TAIRRNENMAKGLQKALQ-----QQPEDESKRSPRPQDLIRLYDIILQNLVELLQLPGLE 441
Query: 413 DDAQYQESVEVRTKTYKAFRCFYIAESLAALRRWRDCVALYSRATAYASDAASSLPS-SG 471
+D +Q+ + ++T +KA+RCF+IA+S +++W + + LY R YA++ S +
Sbjct: 442 EDRAFQKEIGLKTLVFKAYRCFFIAQSYVLVKKWSEALVLYDRVLKYANEVNSDAGAFRN 501
Query: 472 ELATLKPELATLEAAIDSNKYSALAYSVLXXXXXXXXXXXXVAKPGAKLKKVPLAERLGE 531
L L P++ L + S K S A ++L K PL ER
Sbjct: 502 SLKDL-PDVQELITQVRSEKCSLQAAAILDASDSHQPETSSQVKDNK-----PLVERFET 555
Query: 532 YYEDPSLASKSPNVIKLPPDMQPIPAKPLFFDLAQNQLEF 571
+ DPSL +K N++ PP QPIP KPLFFDLA N + F
Sbjct: 556 FCLDPSLVTKQANLVHFPPGFQPIPCKPLFFDLALNHVAF 595
>UNIPROTKB|Q9UHB9 [details] [associations]
symbol:SRP68 "Signal recognition particle 68 kDa protein"
species:9606 "Homo sapiens" [GO:0008312 "7S RNA binding"
evidence=IEA] [GO:0030942 "endoplasmic reticulum signal peptide
binding" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005786 "signal recognition particle, endoplasmic reticulum
targeting" evidence=IDA] [GO:0042493 "response to drug"
evidence=IDA] [GO:0005047 "signal recognition particle binding"
evidence=IPI] [GO:0005783 "endoplasmic reticulum" evidence=TAS]
[GO:0005840 "ribosome" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0006412 "translation" evidence=TAS] [GO:0006614
"SRP-dependent cotranslational protein targeting to membrane"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0044267 "cellular protein metabolic process" evidence=TAS]
[GO:0005737 "cytoplasm" evidence=IDA] Reactome:REACT_71
Reactome:REACT_17015 InterPro:IPR026258 PIRSF:PIRSF038995
GO:GO:0005783 GO:GO:0005829 GO:GO:0005730 GO:GO:0042493
GO:GO:0006412 GO:GO:0005840 EMBL:CH471099 TCDB:3.A.5.9.1
GO:GO:0008312 GO:GO:0006614 GO:GO:0005786 GO:GO:0005047
GO:GO:0030942 eggNOG:NOG325632 KO:K03107 CTD:6730
HOGENOM:HOG000231195 HOVERGEN:HBG059793 OrthoDB:EOG4V9TQB
OMA:KAAMEAF EMBL:AF195951 EMBL:AK074698 EMBL:AK097962 EMBL:BC020238
IPI:IPI00102936 IPI:IPI00168388 RefSeq:NP_001247432.1
RefSeq:NP_055045.2 UniGene:Hs.514495 ProteinModelPortal:Q9UHB9
IntAct:Q9UHB9 STRING:Q9UHB9 PhosphoSite:Q9UHB9 DMDM:37154869
PaxDb:Q9UHB9 PeptideAtlas:Q9UHB9 PRIDE:Q9UHB9
Ensembl:ENST00000307877 GeneID:6730 KEGG:hsa:6730 UCSC:uc002jqk.1
GeneCards:GC17M074035 HGNC:HGNC:11302 HPA:HPA023303 MIM:604858
neXtProt:NX_Q9UHB9 PharmGKB:PA36126 InParanoid:Q9UHB9
PhylomeDB:Q9UHB9 ChiTaRS:Srp68 GenomeRNAi:6730 NextBio:26254
ArrayExpress:Q9UHB9 Bgee:Q9UHB9 CleanEx:HS_SRP68
Genevestigator:Q9UHB9 GermOnline:ENSG00000167881 Uniprot:Q9UHB9
Length = 627
Score = 1127 (401.8 bits), Expect = 2.8e-114, P = 2.8e-114
Identities = 247/580 (42%), Positives = 354/580 (61%)
Query: 5 GNIAENEDNAVKVQPKETPAAKPKV--VYTIEILKIIKDAQQQHGLRHGDYQXXXXXXXX 62
G A E+N +P A + ++EIL+IIK++QQQHGLRHGD+Q
Sbjct: 30 GRGAGGEENKENERPSAGSKANKEFGDSLSLEILQIIKESQQQHGLRHGDFQRYRGYCSR 89
Query: 63 XXXXXXKTLHLPQGDKRHFKKREVTEQHLKDEKFIYIPLMLAERAWGYAMQLRQEANTEP 122
KTL+ G++ F ++VTE+ L D +++ + LM AERAW YAMQL+QEANTEP
Sbjct: 90 RQRRLRKTLNFKMGNRHKFTGKKVTEELLTDNRYLLLVLMDAERAWSYAMQLKQEANTEP 149
Query: 123 RKKFHLVSRLRKAASYAVQLQTLCEAEVCDARTKLEAQAYVSWIVGVLHFELKLWKSAMK 182
RK+FHL+SRLRKA +A +L+ LCE+ DA+TKLEAQAY +++ G+L FE + WK+A++
Sbjct: 150 RKRFHLLSRLRKAVKHAEELERLCESNRVDAKTKLEAQAYTAYLSGMLRFEHQEWKAAIE 209
Query: 183 NLKEAQVVYEKLMSALNEEDALLYKQKVEELTPSLRYCAYNIGDQAGIEDLMQLRSQ--- 239
+ + +YEKL SA EE A+LY Q+VEE++P++RYCAYNIGDQ+ I +LMQ+R +
Sbjct: 210 AFNKCKTIYEKLASAFTEEQAVLYNQRVEEISPNIRYCAYNIGDQSAINELMQMRLRSGG 269
Query: 240 THGDLLHSLDSLMIQSKEHSAEVLSEVSWXXXXXXXXXXXXXXFLLAERSLDASLGQAGA 299
T G L L++L+ Q++ A +SEV W FLL +A++ QA +
Sbjct: 270 TEGLLAEKLEALITQTRAKQAATMSEVEWRGRTVPVKIDKVRIFLLGLADNEAAIVQAES 329
Query: 300 D--KIELLESHLMDCKDAIQVIKEEVKQDPNSKNRT-QGS-G-LSSLQYLHSYLMYIRLE 354
+ K L ES L +C+DAIQV++EE+K D ++ +G G +S+LQYLHSYL YI+L
Sbjct: 330 EETKERLFESMLSECRDAIQVVREELKPDQKQRDYILEGEPGKVSNLQYLHSYLTYIKLS 389
Query: 355 RTIQRNLLLAQQAKDNLKTAGNGQQPSEGKKT--RPQDLVRLYEIILQNLGELQQLSGME 412
I+RN +A+ L+ A QQP + K RPQDL+RLY+IILQNL EL QL G+E
Sbjct: 390 TAIKRNENMAK----GLQRALLQQQPEDDSKRSPRPQDLIRLYDIILQNLVELLQLPGLE 445
Query: 413 DDAQYQESVEVRTKTYKAFRCFYIAESLAALRRWRDCVALYSRATAYASDAASSLPS-SG 471
+D +Q+ + ++T +KA+RCF+IA+S +++W + + LY R YA++ S +
Sbjct: 446 EDKAFQKEIGLKTLVFKAYRCFFIAQSYVLVKKWSEALVLYDRVLKYANEVNSDAGAFKN 505
Query: 472 ELATLKPELATLEAAIDSNKYSALAYSVLXXXXXXXXXXXXVAKPGAKLKKVPLAERLGE 531
L L P++ L + S K S A ++L + K K PL ER
Sbjct: 506 SLKDL-PDVQELITQVRSEKCSLQAAAILDANDAHQTET---SSSQVKDNK-PLVERFET 560
Query: 532 YYEDPSLASKSPNVIKLPPDMQPIPAKPLFFDLAQNQLEF 571
+ DPSL +K N++ PP QPIP KPLFFDLA N + F
Sbjct: 561 FCLDPSLVTKQANLVHFPPGFQPIPCKPLFFDLALNHVAF 600
>UNIPROTKB|F1RW08 [details] [associations]
symbol:SRP68 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0042493 "response to drug" evidence=IEA] [GO:0030942
"endoplasmic reticulum signal peptide binding" evidence=IEA]
[GO:0008312 "7S RNA binding" evidence=IEA] [GO:0006614
"SRP-dependent cotranslational protein targeting to membrane"
evidence=IEA] [GO:0005786 "signal recognition particle, endoplasmic
reticulum targeting" evidence=IEA] [GO:0005047 "signal recognition
particle binding" evidence=IEA] InterPro:IPR026258
PIRSF:PIRSF038995 GO:GO:0042493 GO:GO:0008312 GO:GO:0006614
GO:GO:0005786 GO:GO:0005047 GO:GO:0030942
GeneTree:ENSGT00390000011856 OMA:KAAMEAF EMBL:CU928029
EMBL:CU694895 EMBL:FP680578 Ensembl:ENSSSCT00000018716
Uniprot:F1RW08
Length = 624
Score = 1117 (398.3 bits), Expect = 3.2e-113, P = 3.2e-113
Identities = 246/582 (42%), Positives = 352/582 (60%)
Query: 5 GNIAENEDNAVKVQPKETPAAKPKV--VYTIEILKIIKDAQQQHGLRHGDYQXXXXXXXX 62
G A E+N +P A + ++EIL+IIK++QQQHGLRHGD+Q
Sbjct: 26 GRGAGGEENKENERPSAGSKANKEFGDSLSLEILQIIKESQQQHGLRHGDFQRYRGYCSR 85
Query: 63 XXXXXXKTLHLPQGDKRHFKKREVTEQHLKDEKFIYIPLMLAERAWGYAMQLRQEANTEP 122
KTL+ G++ F ++VTE L D +++ + LM AERAW YAMQL+QEANTEP
Sbjct: 86 RQRRLRKTLNFKMGNRHKFTGKKVTEDLLTDNRYLLLVLMDAERAWSYAMQLKQEANTEP 145
Query: 123 RKKFHLVSRLRKAASYAVQLQTLCEAEVCDARTKLEAQAYVSWIVGVLHFELKLWKSAMK 182
RK+FHL+SRLRKA +A +L+ LCE+ DA+TKLEAQAY +++ G+L FE + WK+A++
Sbjct: 146 RKRFHLLSRLRKAVKHAEELERLCESNRVDAKTKLEAQAYTAYLSGMLRFEHQEWKAAIE 205
Query: 183 NLKEAQVVYEKLMSALNEEDALLYKQKVEELTPSLRYCAYNIGDQAGIEDLMQLRSQ--- 239
+ + +YEKL SA EE A+LY Q+VEE++P++RYCAYNIGDQ+ I +LMQ+R +
Sbjct: 206 AFNKCKTIYEKLASAFTEEQAVLYNQRVEEISPNIRYCAYNIGDQSAINELMQMRLRSGG 265
Query: 240 THGDLLHSLDSLMIQSKEHSAEVLSEVSWXXXXXXXXXXXXXXFLLAERSLDASLGQAGA 299
T G L L++L+ Q++ A +SEV W FLL +A++ QA +
Sbjct: 266 TEGLLAEKLEALITQTRAKQAATMSEVEWRGRAVPVKVDRVRIFLLGLADNEAAIAQAES 325
Query: 300 D--KIELLESHLMDCKDAIQVIKEEVKQDPNSKNRT-QG-SG-LSSLQYLHSYLMYIRLE 354
+ K L ES L +C+DAIQ ++EE+K D ++ G SG +S+LQYLHSYL YI+L
Sbjct: 326 EETKERLFESMLSECRDAIQAVREELKPDQKQRDYPLDGESGKVSNLQYLHSYLTYIKLS 385
Query: 355 RTIQRNLLLAQQAKDNLKTAGNGQQPSE-GKKT-RPQDLVRLYEIILQNLGELQQLSGME 412
I+RN +A+ L+ A QQP + GK++ RPQDL+RLY+IILQNL EL QL G+E
Sbjct: 386 TAIKRNENMAR----GLQKALLQQQPEDDGKRSPRPQDLIRLYDIILQNLVELLQLPGLE 441
Query: 413 DDAQYQESVEVRTKTYKAF--RCFYIAESLAALRRWRDCVALYSRATAYASDAASSLPS- 469
+D +Q+ + ++T YKA+ RCF+IA+S +++W + + LY R YA + S +
Sbjct: 442 EDRAFQKEIGLKTLVYKAYSVRCFFIAQSYVLVKKWSEALVLYDRVLKYADEVNSDAGAF 501
Query: 470 SGELATLKPELATLEAAIDSNKYSALAYSVLXXXXXXXXXXXXVAKPGAKLKKVPLAERL 529
L L P++ L + + S K A ++L K PL ER
Sbjct: 502 KNSLKDL-PDVLELISQVRSEKCCLQAAAILDTNDPQQTETSSQVKDNK-----PLVERF 555
Query: 530 GEYYEDPSLASKSPNVIKLPPDMQPIPAKPLFFDLAQNQLEF 571
+ DPSL +K N++ PP QP+P KPLFFDLA N + F
Sbjct: 556 ETFCLDPSLVTKQANLVHFPPGFQPVPCKPLFFDLALNHVAF 597
>UNIPROTKB|G3V1U4 [details] [associations]
symbol:SRP68 "Signal recognition particle 68 kDa protein"
species:9606 "Homo sapiens" [GO:0005047 "signal recognition
particle binding" evidence=IEA] [GO:0005786 "signal recognition
particle, endoplasmic reticulum targeting" evidence=IEA]
[GO:0006614 "SRP-dependent cotranslational protein targeting to
membrane" evidence=IEA] [GO:0008312 "7S RNA binding" evidence=IEA]
[GO:0030942 "endoplasmic reticulum signal peptide binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR026258 PIRSF:PIRSF038995 GO:GO:0005737 EMBL:CH471099
EMBL:AC040980 GO:GO:0008312 GO:GO:0006614 GO:GO:0005786
GO:GO:0005047 GO:GO:0030942 KO:K03107 CTD:6730 UniGene:Hs.514495
GeneID:6730 KEGG:hsa:6730 HGNC:HGNC:11302 ChiTaRS:Srp68
RefSeq:NP_001247431.1 Ensembl:ENST00000539137 ArrayExpress:G3V1U4
Bgee:G3V1U4 Uniprot:G3V1U4
Length = 589
Score = 988 (352.9 bits), Expect = 2.4e-108, Sum P(2) = 2.4e-108
Identities = 214/488 (43%), Positives = 306/488 (62%)
Query: 95 KFIYIPLMLAERAWGYAMQLRQEANTEPRKKFHLVSRLRKAASYAVQLQTLCEAEVCDAR 154
+++ + LM AERAW YAMQL+QEANTEPRK+FHL+SRLRKA +A +L+ LCE+ DA+
Sbjct: 84 RYLLLVLMDAERAWSYAMQLKQEANTEPRKRFHLLSRLRKAVKHAEELERLCESNRVDAK 143
Query: 155 TKLEAQAYVSWIVGVLHFELKLWKSAMKNLKEAQVVYEKLMSALNEEDALLYKQKVEELT 214
TKLEAQAY +++ G+L FE + WK+A++ + + +YEKL SA EE A+LY Q+VEE++
Sbjct: 144 TKLEAQAYTAYLSGMLRFEHQEWKAAIEAFNKCKTIYEKLASAFTEEQAVLYNQRVEEIS 203
Query: 215 PSLRYCAYNIGDQAGIEDLMQLRSQ---THGDLLHSLDSLMIQSKEHSAEVLSEVSWXXX 271
P++RYCAYNIGDQ+ I +LMQ+R + T G L L++L+ Q++ A +SEV W
Sbjct: 204 PNIRYCAYNIGDQSAINELMQMRLRSGGTEGLLAEKLEALITQTRAKQAATMSEVEWRGR 263
Query: 272 XXXXXXXXXXXFLLAERSLDASLGQAGAD--KIELLESHLMDCKDAIQVIKEEVKQDPNS 329
FLL +A++ QA ++ K L ES L +C+DAIQV++EE+K D
Sbjct: 264 TVPVKIDKVRIFLLGLADNEAAIVQAESEETKERLFESMLSECRDAIQVVREELKPDQKQ 323
Query: 330 KNRT-QGS-G-LSSLQYLHSYLMYIRLERTIQRNLLLAQQAKDNLKTAGNGQQPSEGKKT 386
++ +G G +S+LQYLHSYL YI+L I+RN +A+ L+ A QQP + K
Sbjct: 324 RDYILEGEPGKVSNLQYLHSYLTYIKLSTAIKRNENMAK----GLQRALLQQQPEDDSKR 379
Query: 387 --RPQDLVRLYEIILQNLGELQQLSGMEDDAQYQESVEVRTKTYKAFRCFYIAESLAALR 444
RPQDL+RLY+IILQNL EL QL G+E+D +Q+ + ++T +KA+RCF+IA+S ++
Sbjct: 380 SPRPQDLIRLYDIILQNLVELLQLPGLEEDKAFQKEIGLKTLVFKAYRCFFIAQSYVLVK 439
Query: 445 RWRDCVALYSRATAYASDAASSLPS-SGELATLKPELATLEAAIDSNKYSALAYSVLXXX 503
+W + + LY R YA++ S + L L P++ L + S K S A ++L
Sbjct: 440 KWSEALVLYDRVLKYANEVNSDAGAFKNSLKDL-PDVQELITQVRSEKCSLQAAAILDAN 498
Query: 504 XXXXXXXXXVAKPGAKLKKVPLAERLGEYYEDPSLASKSPNVIKLPPDMQPIPAKPLFFD 563
+ K K PL ER + DPSL +K N++ PP QPIP KPLFFD
Sbjct: 499 DAHQTET---SSSQVKDNK-PLVERFETFCLDPSLVTKQANLVHFPPGFQPIPCKPLFFD 554
Query: 564 LAQNQLEF 571
LA N + F
Sbjct: 555 LALNHVAF 562
Score = 103 (41.3 bits), Expect = 2.4e-108, Sum P(2) = 2.4e-108
Identities = 23/52 (44%), Positives = 32/52 (61%)
Query: 5 GNIAENEDNAVKVQPKETPAAKPKV--VYTIEILKIIKDAQQQHGLRHGDYQ 54
G A E+N +P A + ++EIL+IIK++QQQHGLRHGD+Q
Sbjct: 30 GRGAGGEENKENERPSAGSKANKEFGDSLSLEILQIIKESQQQHGLRHGDFQ 81
>RGD|1305376 [details] [associations]
symbol:Srp68 "signal recognition particle 68" species:10116
"Rattus norvegicus" [GO:0005047 "signal recognition particle
binding" evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005786 "signal recognition particle, endoplasmic reticulum
targeting" evidence=IEA;ISO] [GO:0006614 "SRP-dependent
cotranslational protein targeting to membrane" evidence=IEA]
[GO:0008312 "7S RNA binding" evidence=IEA] [GO:0030942 "endoplasmic
reticulum signal peptide binding" evidence=IEA] [GO:0042493
"response to drug" evidence=ISO] InterPro:IPR026258
PIRSF:PIRSF038995 RGD:1305376 GO:GO:0008312 GO:GO:0006614
GO:GO:0005786 GO:GO:0005047 GO:GO:0030942 IPI:IPI00210212
Ensembl:ENSRNOT00000028875 ArrayExpress:D3ZVL3 Uniprot:D3ZVL3
Length = 587
Score = 987 (352.5 bits), Expect = 5.0e-108, Sum P(2) = 5.0e-108
Identities = 213/488 (43%), Positives = 303/488 (62%)
Query: 95 KFIYIPLMLAERAWGYAMQLRQEANTEPRKKFHLVSRLRKAASYAVQLQTLCEAEVCDAR 154
+++ + LM AERAW YAMQL+QEANTEPRK+FHL+SRLRKA +A +L+ LCE+ DA+
Sbjct: 83 RYLLLVLMDAERAWSYAMQLKQEANTEPRKRFHLLSRLRKAVKHAEELERLCESSRVDAK 142
Query: 155 TKLEAQAYVSWIVGVLHFELKLWKSAMKNLKEAQVVYEKLMSALNEEDALLYKQKVEELT 214
TKLEAQAY +++ G+L FE + WK+A++ + +YEKL SA EE A+LY Q+VEE++
Sbjct: 143 TKLEAQAYTAYLSGMLRFEHQEWKAAIEAFNRCKTIYEKLASAFTEEQAVLYNQRVEEIS 202
Query: 215 PSLRYCAYNIGDQAGIEDLMQLRSQ---THGDLLHSLDSLMIQSKEHSAEVLSEVSWXXX 271
P++RYCAYNIGDQ+ I +LMQ+R + T G L L++L+ Q++ A +SEV W
Sbjct: 203 PNIRYCAYNIGDQSAINELMQMRLRSGGTEGLLAEKLEALITQTRAKQAATMSEVEWRGR 262
Query: 272 XXXXXXXXXXXFLLAERSLDASLGQAGAD--KIELLESHLMDCKDAIQVIKEEVKQDPNS 329
FLL +A++ QA ++ K L ES L +C+DA+Q ++EE+K D
Sbjct: 263 TVPVKIDKVRIFLLGLADNEAAIVQAESEETKERLFESMLSECRDALQAVREELKPDQKQ 322
Query: 330 KNRT-QG-SG-LSSLQYLHSYLMYIRLERTIQRNLLLAQQAKDNLKTAGNGQQPSEGKKT 386
++ T G SG +S+LQYLHSYL YI+L I+RN +A+ L A QQP + K
Sbjct: 323 RDYTVDGESGKVSNLQYLHSYLTYIKLSTAIRRNENMAK----GLHRALLQQQPEDDSKR 378
Query: 387 --RPQDLVRLYEIILQNLGELQQLSGMEDDAQYQESVEVRTKTYKAFRCFYIAESLAALR 444
RPQDL+RLY+IILQNL EL QL G+E+D +Q+ + ++T +KA+RCF+IA+S ++
Sbjct: 379 SPRPQDLIRLYDIILQNLVELLQLPGLEEDRTFQKEIGLKTLVFKAYRCFFIAQSYVLVK 438
Query: 445 RWRDCVALYSRATAYASDAASSLPS-SGELATLKPELATLEAAIDSNKYSALAYSVLXXX 503
+W + + LY R YAS+ +S + L L P++ L + S K S A ++L
Sbjct: 439 KWSEALVLYDRVLKYASEVSSHGGAFKNSLKDL-PDVQELITQVRSEKCSLQAAAILDAN 497
Query: 504 XXXXXXXXXVAKPGAKLKKVPLAERLGEYYEDPSLASKSPNVIKLPPDMQPIPAKPLFFD 563
K PL ER + DPSL +K +++ PP QPIP KPLFFD
Sbjct: 498 ESHQTDTASQVKDNT-----PLVERFETFCLDPSLVTKQASLVHFPPGFQPIPCKPLFFD 552
Query: 564 LAQNQLEF 571
LA N + F
Sbjct: 553 LALNHVAF 560
Score = 101 (40.6 bits), Expect = 5.0e-108, Sum P(2) = 5.0e-108
Identities = 21/52 (40%), Positives = 32/52 (61%)
Query: 5 GNIAENEDNAVKVQPKETPAAKPKV--VYTIEILKIIKDAQQQHGLRHGDYQ 54
G A ++N +P A + ++EIL++IK++QQQHGLRHGD+Q
Sbjct: 29 GRSAGGDENKENERPSAGSKANKEFGDSLSLEILQVIKESQQQHGLRHGDFQ 80
>UNIPROTKB|F5H5Y3 [details] [associations]
symbol:SRP68 "Signal recognition particle 68 kDa protein"
species:9606 "Homo sapiens" [GO:0005047 "signal recognition
particle binding" evidence=IEA] [GO:0005786 "signal recognition
particle, endoplasmic reticulum targeting" evidence=IEA]
[GO:0006614 "SRP-dependent cotranslational protein targeting to
membrane" evidence=IEA] [GO:0008312 "7S RNA binding" evidence=IEA]
[GO:0030942 "endoplasmic reticulum signal peptide binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR026258 PIRSF:PIRSF038995 GO:GO:0005737 EMBL:AC040980
GO:GO:0008312 GO:GO:0006614 GO:GO:0005786 GO:GO:0005047
GO:GO:0030942 HGNC:HGNC:11302 ChiTaRS:Srp68 IPI:IPI01015006
Ensembl:ENST00000355113 ArrayExpress:F5H5Y3 Bgee:F5H5Y3
Uniprot:F5H5Y3
Length = 526
Score = 1024 (365.5 bits), Expect = 2.3e-103, P = 2.3e-103
Identities = 221/507 (43%), Positives = 318/507 (62%)
Query: 76 GDKRHFKKREVTEQHLKDEKFIYIPLMLAERAWGYAMQLRQEANTEPRKKFHLVSRLRKA 135
G++ F ++VTE+ L D +++ + LM AERAW YAMQL+QEANTEPRK+FHL+SRLRKA
Sbjct: 2 GNRHKFTGKKVTEELLTDNRYLLLVLMDAERAWSYAMQLKQEANTEPRKRFHLLSRLRKA 61
Query: 136 ASYAVQLQTLCEAEVCDARTKLEAQAYVSWIVGVLHFELKLWKSAMKNLKEAQVVYEKLM 195
+A +L+ LCE+ DA+TKLEAQAY +++ G+L FE + WK+A++ + + +YEKL
Sbjct: 62 VKHAEELERLCESNRVDAKTKLEAQAYTAYLSGMLRFEHQEWKAAIEAFNKCKTIYEKLA 121
Query: 196 SALNEEDALLYKQKVEELTPSLRYCAYNIGDQAGIEDLMQLRSQ---THGDLLHSLDSLM 252
SA EE A+LY Q+VEE++P++RYCAYNIGDQ+ I +LMQ+R + T G L L++L+
Sbjct: 122 SAFTEEQAVLYNQRVEEISPNIRYCAYNIGDQSAINELMQMRLRSGGTEGLLAEKLEALI 181
Query: 253 IQSKEHSAEVLSEVSWXXXXXXXXXXXXXXFLLAERSLDASLGQAGAD--KIELLESHLM 310
Q++ A +SEV W FLL +A++ QA ++ K L ES L
Sbjct: 182 TQTRAKQAATMSEVEWRGRTVPVKIDKVRIFLLGLADNEAAIVQAESEETKERLFESMLS 241
Query: 311 DCKDAIQVIKEEVKQDPNSKNRT-QGS-G-LSSLQYLHSYLMYIRLERTIQRNLLLAQQA 367
+C+DAIQV++EE+K D ++ +G G +S+LQYLHSYL YI+L I+RN +A+
Sbjct: 242 ECRDAIQVVREELKPDQKQRDYILEGEPGKVSNLQYLHSYLTYIKLSTAIKRNENMAK-- 299
Query: 368 KDNLKTAGNGQQPSEGKKT--RPQDLVRLYEIILQNLGELQQLSGMEDDAQYQESVEVRT 425
L+ A QQP + K RPQDL+RLY+IILQNL EL QL G+E+D +Q+ + ++T
Sbjct: 300 --GLQRALLQQQPEDDSKRSPRPQDLIRLYDIILQNLVELLQLPGLEEDKAFQKEIGLKT 357
Query: 426 KTYKAFRCFYIAESLAALRRWRDCVALYSRATAYASDAASSLPS-SGELATLKPELATLE 484
+KA+RCF+IA+S +++W + + LY R YA++ S + L L P++ L
Sbjct: 358 LVFKAYRCFFIAQSYVLVKKWSEALVLYDRVLKYANEVNSDAGAFKNSLKDL-PDVQELI 416
Query: 485 AAIDSNKYSALAYSVLXXXXXXXXXXXXVAKPGAKLKKVPLAERLGEYYEDPSLASKSPN 544
+ S K S A ++L + K K PL ER + DPSL +K N
Sbjct: 417 TQVRSEKCSLQAAAILDANDAHQTET---SSSQVKDNK-PLVERFETFCLDPSLVTKQAN 472
Query: 545 VIKLPPDMQPIPAKPLFFDLAQNQLEF 571
++ PP QPIP KPLFFDLA N + F
Sbjct: 473 LVHFPPGFQPIPCKPLFFDLALNHVAF 499
>TAIR|locus:2156181 [details] [associations]
symbol:AT5G61970 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0005829 "cytosol"
evidence=IDA] InterPro:IPR026258 PIRSF:PIRSF038995 GO:GO:0005829
EMBL:CP002688 GenomeReviews:BA000015_GR EMBL:AB022212 GO:GO:0008312
GO:GO:0006614 GO:GO:0005786 GO:GO:0005047 GO:GO:0030942
eggNOG:NOG325632 KO:K03107 HOGENOM:HOG000231195 OMA:KAAMEAF
EMBL:AY051002 EMBL:AY079306 IPI:IPI00539653 RefSeq:NP_568947.1
UniGene:At.20648 STRING:Q9FH46 PaxDb:Q9FH46 PRIDE:Q9FH46
EnsemblPlants:AT5G61970.1 GeneID:836318 KEGG:ath:AT5G61970
TAIR:At5g61970 InParanoid:Q9FH46 PhylomeDB:Q9FH46
ProtClustDB:CLSN2690063 ArrayExpress:Q9FH46 Genevestigator:Q9FH46
Uniprot:Q9FH46
Length = 605
Score = 593 (213.8 bits), Expect = 1.1e-57, P = 1.1e-57
Identities = 168/588 (28%), Positives = 295/588 (50%)
Query: 9 ENEDNAVKVQ-PKETPAAKPKVVYTIEILKIIKDAQQQHGLRHGDYQXXXXXXXXXXXXX 67
++E +A+++ PK + + ++I +L+++K +Q QHGLRHGDY
Sbjct: 5 QSEISAMEIDDPKSESSDQILPRFSINVLQLMKSSQAQHGLRHGDYARYRRYCSARLRRL 64
Query: 68 XKTLHLPQGDKRHFKKREVTEQHLKDEKFIYIPLMLAERAWGYAMQLRQEAN-TEPRKKF 126
K+L G + + +R + E + D +F+++ +AERAW +AM+ RQ + R++
Sbjct: 65 YKSLKFTHG-RGKYTRRAILESTVTDVRFLHVVFYMAERAWSHAMEKRQLPDGPNARQRI 123
Query: 127 HLVSRLRKAASYAVQLQTLCEAEVCDARTKLEAQAYVSWIVGVLHFEL-KLWKSAMKNLK 185
+LV RLRKA +A +LC + D+RT LEA+AY S++ G L FE + W++ + K
Sbjct: 124 YLVGRLRKAVKWASLFSSLCSIKT-DSRTSLEAEAYASYMKGTLLFEQDQNWETGLACFK 182
Query: 186 EAQVVYEKLMSALNEEDALLYKQKVEELTPSLRYCAYNIG-DQAGIEDLMQLRSQTHG-- 242
A+ VYE+L + E+ +L +++VEEL PS+RYC + IG +L+Q+ + G
Sbjct: 183 NARAVYEELGKYGDLENQVLCRERVEELEPSIRYCLHKIGKSNLQTSELLQI-GEMEGPA 241
Query: 243 -DLLHS-LDSLMIQSKEHSAEVLSEVSWXXXXXXXXXXXXXXFLLAERSLDASLGQAGAD 300
DL + +++ M +++ A L+E SW +L + L+ L A+
Sbjct: 242 LDLFKAKIEAAMEEARSQQAASLTEFSWLGYRFPVSNPKSRVSILKAQELEKELQSPTAE 301
Query: 301 KIELLESHLMDCK--DAIQVIKEEVKQDPNSKNRTQGSGLSSLQYLHSYLMYIRLERTIQ 358
+ + + K A + ++ D S + S L L + + +RTI+
Sbjct: 302 SLPAEKKLTIFDKLFTAYHDARNTIRSDLVSAGNAE-SVKDDLNGLDKAVGAVLGQRTIE 360
Query: 359 RNLLLAQQAKDNLKTAGNGQQPSEGKKTRPQDLVRLYEIILQNLGELQQL--SGME---D 413
RN LL + AK L + K TRP++LVRLY+++LQN+ +L L SG + +
Sbjct: 361 RNQLLVKVAKSKLNRK---RDDKNDKVTRPEELVRLYDLLLQNVADLSDLISSGRDRKPE 417
Query: 414 DAQYQESVEVRTKTYKAFRCFYIAESLAALRRWRDCVALYSRATAYASDAASSLPSSGEL 473
+ ++E + + ++A RCFY+A+S + + + ALYSRA + A DA + S +
Sbjct: 418 EIAFEEECQRTSLAFRAERCFYLAKSYSLAGKRAEAFALYSRARSLAEDALNKFQSIAKK 477
Query: 474 --ATLKPELATLEAAIDSNKYSALAYSVLXXXXXXXXXXXXVA-----KPGAKLKKVPLA 526
T++ EL TL +N A ++ ++ A++++ L
Sbjct: 478 DEGTIQ-ELKTLIKECRANSCIEHATGIMEEERAPENLSNRMSTISLNNTAAQVEEKYLL 536
Query: 527 ERLGEYYEDP---SLASKSPNVIKLPPDMQPIPAKPLFFDLAQNQLEF 571
++L + YE S +P + + PP +Q IP P+ DLA N ++F
Sbjct: 537 DKL-DVYESAVGDSNTKTAPKIERFPPALQSIPRNPIVLDLAYNCIDF 583
>WB|WBGene00010097 [details] [associations]
symbol:F55C5.8 species:6239 "Caenorhabditis elegans"
[GO:0000003 "reproduction" evidence=IMP] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040002 "collagen and
cuticulin-based cuticle development" evidence=IMP] [GO:0040018
"positive regulation of multicellular organism growth"
evidence=IMP] [GO:0040035 "hermaphrodite genitalia development"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] InterPro:IPR026258 PIRSF:PIRSF038995 GO:GO:0009792
GO:GO:0006898 GO:GO:0040007 GO:GO:0002119 GO:GO:0040018
GO:GO:0040035 Gene3D:1.25.40.280 InterPro:IPR004328 GO:GO:0040002
EMBL:Z78198 GO:GO:0008312 GO:GO:0006614 GO:GO:0005786 GO:GO:0005047
GO:GO:0030942 PIR:T22716 RefSeq:NP_506083.1
ProteinModelPortal:Q20822 STRING:Q20822 PaxDb:Q20822
EnsemblMetazoa:F55C5.8.1 EnsemblMetazoa:F55C5.8.2 GeneID:179686
KEGG:cel:CELE_F55C5.8 UCSC:F55C5.8 CTD:179686 WormBase:F55C5.8
eggNOG:NOG325632 GeneTree:ENSGT00390000011856 HOGENOM:HOG000022449
InParanoid:Q20822 KO:K03107 OMA:LEFLKMN NextBio:906454
Uniprot:Q20822
Length = 622
Score = 576 (207.8 bits), Expect = 6.8e-56, P = 6.8e-56
Identities = 169/562 (30%), Positives = 274/562 (48%)
Query: 32 TIEILKIIKDAQQQHGLRHGDYQXXXXXXXXXXXXXXKTLHLPQGD------KRHFKKRE 85
T+ IL+++KDAQQQHGLRHGDY K L K F K+
Sbjct: 19 TVHILQVVKDAQQQHGLRHGDYARYRKYCAAKLERMRKALKFTNSHNCQKKRKAKFVKKW 78
Query: 86 VTEQHLKDEKFIYIPLMLAERAWGYAM--QLRQEANTEP-RKKFHLVSRLRKAASYAVQL 142
++ + +++ +F+ + +ER + AM ++ E N E RKKF +++ LRKA +A L
Sbjct: 79 LSVESVQNVQFLNFGIFESERRYAEAMIDKITLEDNPEKSRKKFSMINSLRKAVLHATNL 138
Query: 143 QTLC-EAEVCDARTKLEAQAYVSWIVGVLHFELKLWKSAMKNLKEAQVVYEKLMSALNEE 201
+ + E+E DA TKLEAQAY +W+ G+ FE + W+ A ++LK A+ VYEKL A N
Sbjct: 139 EKIVQESERFDAPTKLEAQAYAAWMRGMCSFESRNWQKASESLKLAKTVYEKLAEATNNT 198
Query: 202 D-ALLYKQKVEELTPSLRYCAYNIGDQAG----IEDLMQLRSQTHGDLLHSLDSLMIQSK 256
+ ++K + E+ P LR C +NI + G + +LM+LR Q S+D L+ + +
Sbjct: 199 TLSSIFKGRCREIQPQLRLCEFNIAESPGAVGTMTELMELRMQMGEGGDSSVDKLISEMR 258
Query: 257 EHSAEV-LSEVSWXXXXXXXXXXXXXXFLLAERSLDASLGQAGADKIELLESHLMDCKDA 315
+ + + W + + + L Q K E + D
Sbjct: 259 ASATSAEVVTIEWGGAKSTVDDEKAKQVVQEWKQTEVELAQCQTPK-EKMALFEKATADT 317
Query: 316 IQVIKEEVKQDPNSKNRTQGSGLSSLQYLHSYLMYIRLERTIQRNLLLAQQAKDNLKTAG 375
I + + D + ++ + + LQ + +YL ++++ T R L + DN K
Sbjct: 318 RDAI-DRIS-DIIRRKSSENADTTVLQSIKAYLEFLKMNGTASRYLAII----DNTK--- 368
Query: 376 NGQQPSEGKKTRPQDLVRLYEIILQNLGELQQLSGMEDDAQYQESVEVRTKTYKAFRCFY 435
SE KK++PQDL+RLY+ +++ E+ ++ G + D ++ EV+ + Y+AFRCFY
Sbjct: 369 -----SE-KKSKPQDLLRLYDSVIEIYKEVAEIPGADHDKNLIQAFEVKVEYYRAFRCFY 422
Query: 436 IAESLAALRRWRDCVALYSRATAYASDAASSLPS--SGELATLKPE--LATLEAAIDSNK 491
+A S +AL ++ + AL+ R + DA L S T + + L L + ++S K
Sbjct: 423 MASSYSALHKYSEAAALFDRTVSRVQDAEGKLKKLKSSSFITNETQSSLNELRSEVESAK 482
Query: 492 YSALAYSVLXXXXXXXXXXXXVAKPGAKLKKVPLAERLGEYYE-DP--SLASKSP-NVIK 547
+ A + L +AK + K PL E + E+ + D SL K V
Sbjct: 483 VTVRA-ARLASAAGDVKTDSELAKI---IDKRPLLETVNEWRQWDVRNSLKDKKTIPVAS 538
Query: 548 LPPDMQPIPAKPLFFDLAQNQL 569
LPP P+P KP+FFDLA L
Sbjct: 539 LPPAFIPMPNKPIFFDLANFHL 560
>ASPGD|ASPL0000011229 [details] [associations]
symbol:AN4043 species:162425 "Emericella nidulans"
[GO:0034399 "nuclear periphery" evidence=IEA] [GO:0005786 "signal
recognition particle, endoplasmic reticulum targeting"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0005048
"signal sequence binding" evidence=IEA] [GO:0045047 "protein
targeting to ER" evidence=IEA] InterPro:IPR026258 PIRSF:PIRSF038995
EMBL:BN001302 EMBL:AACD01000065 GO:GO:0008312 GO:GO:0006614
GO:GO:0005786 GO:GO:0005047 GO:GO:0030942 eggNOG:NOG325632
KO:K03107 OMA:LEFLKMN OrthoDB:EOG4CC794 RefSeq:XP_661647.1
EnsemblFungi:CADANIAT00004639 GeneID:2873463 KEGG:ani:AN4043.2
HOGENOM:HOG000211745 Uniprot:Q5B5Y7
Length = 621
Score = 229 (85.7 bits), Expect = 9.9e-32, Sum P(2) = 9.9e-32
Identities = 78/300 (26%), Positives = 136/300 (45%)
Query: 290 LDASLGQAGA--DKIELLESHLMDCKDAIQVIKEEVKQDPNSKNRTQGSGLSSLQYLHSY 347
L+A G + + DK +S ++ +DA+ K + + + SLQ +
Sbjct: 289 LNAPEGNSASAKDKAAAYDSVIIASQDAVDATKTAIDDLASEGVDPSDKRMQSLQITRTA 348
Query: 348 LMYIRLERTIQRNLLLA------------QQAKDNLKTAGNGQQPSEGKKTRPQDLVRLY 395
+ Y + + RN +L +Q+ N K +PS K TR ++ V LY
Sbjct: 349 VNYALVGWRVGRNRVLCGENDGITFEPSRRQSPKNKKATSEHDEPSGKKLTRLRERVVLY 408
Query: 396 EIILQNLGELQQLSGMEDDAQYQESVEVRTKTYKAFRCFYIAESLAALRRWRDCVALYSR 455
+ LQ++ + +L G+ D+ + + +E + ++A R I S A L + ++ +AL+S+
Sbjct: 409 DSTLQSIEFILELPGVAADSDFVQELEAKRTYFRALRSLTIGRSHALLGKSQNALALFSQ 468
Query: 456 ATAYASDAASSLPSSGELATL---KPELATLEAAIDSNKYSALAYSVLXXXXXXXXXXXX 512
A + AS AA+S+ S+ P L+ A S ++ A
Sbjct: 469 ALSLASKAAASIQSTANTGMDIDGPPRLSIFPAQASSLEHELRALVTKYQGLVTLESISA 528
Query: 513 VAKPGAK-LKKVPLAERLGEYYEDPSLASKSPNVIKLPPDMQPIPAKPLFFDLAQNQLEF 571
+ K + PL ERL EY D SL N++ PP+++PIP KPLF D+A N +++
Sbjct: 529 QEQSSNKSTPQRPLVERLHEYAGD-SLDLN--NLVPYPPEIRPIPVKPLFLDVAWNYIDY 585
Score = 197 (74.4 bits), Expect = 9.9e-32, Sum P(2) = 9.9e-32
Identities = 58/197 (29%), Positives = 99/197 (50%)
Query: 42 AQQQHGLRHGDYQXXXXXXXXXXXXXXKTLH--LPQGDKRHFKKREVTEQHLKDEKF-IY 98
A+++ L GDY K L P+G +++ K ++ Q + + ++
Sbjct: 9 ARREEVLVAGDYNAYRAHTTRKLHNIRKKLGQTTPKG-RKYTSKPPISAQAVGENAANVH 67
Query: 99 IPLMLAERAWGYAMQLRQEANTEPRKKF-------HLVSRLRKAASYAVQLQTLCEAEVC 151
+ L+ AERAW AM ++ + +P K H++SRL KAA YA QL L E +
Sbjct: 68 VLLLSAERAWAQAMHMKSTHSADPSAKGITGAARRHIISRLSKAAGYANQLVGLLEDKSG 127
Query: 152 DARTK---LEAQAYVSWIVGVLHFELKLWKSAMKNLKEAQVVYEKLMSALNEEDALLYKQ 208
T LEA+AY+S ++G ++ E + W+ ++N ++V+Y L A + DA ++
Sbjct: 128 SGATDVDVLEARAYLSSLMGAIYLEKRNWEQCLRNYSVSRVIYTALGQAA-KRDA--FRD 184
Query: 209 KVE-ELTPSLRYCAYNI 224
+ + PSLRY AY +
Sbjct: 185 LMSGNIDPSLRYAAYQM 201
>DICTYBASE|DDB_G0285821 [details] [associations]
symbol:srp68 "signal recognition particle 68 kDa
subunit" species:44689 "Dictyostelium discoideum" [GO:0030942
"endoplasmic reticulum signal peptide binding" evidence=IEA]
[GO:0008312 "7S RNA binding" evidence=IEA] [GO:0006614
"SRP-dependent cotranslational protein targeting to membrane"
evidence=IEA;ISS] [GO:0005786 "signal recognition particle,
endoplasmic reticulum targeting" evidence=IEA;ISS] [GO:0005047
"signal recognition particle binding" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR026258
PIRSF:PIRSF038995 dictyBase:DDB_G0285821 GenomeReviews:CM000153_GR
EMBL:AAFI02000080 GO:GO:0008312 GO:GO:0006614 GO:GO:0005786
GO:GO:0005047 GO:GO:0030942 eggNOG:NOG325632 KO:K03107 OMA:LEFLKMN
RefSeq:XP_001134536.1 STRING:Q1ZXE8 PRIDE:Q1ZXE8
EnsemblProtists:DDB0232383 GeneID:8625304 KEGG:ddi:DDB_G0285821
ProtClustDB:CLSZ2454931 Uniprot:Q1ZXE8
Length = 614
Score = 278 (102.9 bits), Expect = 5.2e-31, Sum P(2) = 5.2e-31
Identities = 73/256 (28%), Positives = 122/256 (47%)
Query: 15 VKVQPKETPAAKPKVVYTIEILKIIKDAQQQHGLRHGDYQXXXXXXXXXXXXXXKTLHLP 74
+ PKE PK + ++IL + +Q Q GLR DY+ L
Sbjct: 5 ISTSPKEDV---PKEKFHLDILNFSQTSQIQFGLRLQDYKKYRQYCSKRIQRLRSQLRKQ 61
Query: 75 QGDKRHFKKREV----TEQHLKDEKFIYIPLMLAERAWGYAMQLRQ--EANTEPRKKFHL 128
G K + K + TE+ + D +++ I L+ ERAW YAM L+ E + + R FH+
Sbjct: 62 YGKKNYVNKIVLNGGETEKQINDVRYLQISLLKTERAWSYAMDLKAQFEKDNDSRIGFHM 121
Query: 129 VSRLRKAASYAVQLQTLCEAEVCDARTKLEAQAYVSWIVGVLHFELKLWKSAMKNLKEAQ 188
R KA+ + QL LC+ V D T +EA AY SW+ L + +K A++ + ++
Sbjct: 122 NRRFGKASRNSTQLYELCKL-VADQYTIIEAHAYSSWMASSLSLTKQDFKKALEEINISK 180
Query: 189 VVYEKLMSALNEEDALLYKQKVEELTPSLRYCAYNIGDQAGIEDLMQLRSQTHGDLLHSL 248
+YEKL + LY++++EE P +R+C YN+ ++ + + + T + SL
Sbjct: 181 TIYEKLSEQGDHSQKELYQKRIEETEPIIRFCLYNLKNEKNTSNKVSQNTLTI--IEQSL 238
Query: 249 DSLMIQSKEHSAEVLS 264
+ L Q + + S
Sbjct: 239 EELKNQENKKKSSTSS 254
Score = 136 (52.9 bits), Expect = 5.2e-31, Sum P(2) = 5.2e-31
Identities = 61/279 (21%), Positives = 126/279 (45%)
Query: 308 HLMDCKDAIQVIKEEVKQ--DPNSKNRTQGSGLS--SLQYLHSYLMYIRLERTIQRNLLL 363
+L++C+ ++K ++ N KN++ S + S + L +Y+MY +++ +RN +L
Sbjct: 322 NLINCET---IVKNDLSTLVRVNLKNKSVKSEIEEQSTRILLAYIMYHKMKYLYERNSIL 378
Query: 364 A---QQAKDNLKTAGNGQQPSEGKKTRPQDLVRL--YEI-ILQNLGELQQLSGMEDDAQY 417
Q+ D K + + + KK DLVRL +++ + + E + ++ A+
Sbjct: 379 ITMMQRVLDGEKVDESAIK-KKVKKVTWNDLVRLSTHQVKVYTIMSESRDTDSNKEIARD 437
Query: 418 QESVEVRTKTYKAFRCFYIAESLAALRRWRDCVALYSRATAYASDAASSLPSSGELAT-- 475
Q++ + K+ R +YIA LA ++ + +A+ R + + + ++
Sbjct: 438 QDAQLI---LLKSIRLYYIAVCLAKSLKFSETMAVLDRVLTNIQNVRKTNTKNQQILNDT 494
Query: 476 --LKPELATLEAAIDSNKY-SALAYSVLXXXXXXXXXXXXVAKPGAKLKKVPLAERLGEY 532
L+ + + I +N + L+ + + K L L +
Sbjct: 495 NELESNIKKQRSQIHANSFIQQLSENQDLKNQMSSLSIGGITTASGKSND--LISGLDSF 552
Query: 533 YEDPSLASKSPNVIKLPPDMQPIPAKPLFFDLAQNQLEF 571
D S ++ +++LPP +QP+ AKP+FFDLA N + F
Sbjct: 553 --DTSFLTEK-KLVQLPPQLQPVQAKPIFFDLAFNSVTF 588
>UNIPROTKB|G4NF58 [details] [associations]
symbol:MGG_04190 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR026258 PIRSF:PIRSF038995 EMBL:CM001236 GO:GO:0008312
GO:GO:0006614 GO:GO:0005786 GO:GO:0005047 GO:GO:0030942 KO:K03107
RefSeq:XP_003719633.1 EnsemblFungi:MGG_04190T0 GeneID:2677397
KEGG:mgr:MGG_04190 Uniprot:G4NF58
Length = 615
Score = 180 (68.4 bits), Expect = 4.2e-21, Sum P(2) = 4.2e-21
Identities = 53/203 (26%), Positives = 101/203 (49%)
Query: 33 IEILKIIKDAQQQHGLRHGDYQXXXXXXXXXXXXXXKTLHLPQGDK-RHFKKREVTEQHL 91
++I +I +++Q + G Y K L++ + ++ + ++T + +
Sbjct: 1 MDITTLIVSSREQ-AMLEGGYSAYRTQLAGRLRNCRKRLNIATKSRAKYHAQPQLTPEAV 59
Query: 92 KDEK-FIYIPLMLAERAWGYAMQLRQEANTEPRK------KFHLVSRLRKAASYAVQLQT 144
+ K ++++ +M AERAW +AM ++ A+ K + H+VSRL KAA A QL
Sbjct: 60 AENKEYLHLQIMTAERAWAHAMTMKS-AHAADNKGITGSTRSHIVSRLHKAARTAEQLAE 118
Query: 145 LCEAEVCDARTK--LEAQAYVSWIVGVLHFELKLWKSAMKNLKEAQVVYEKLMSALNEED 202
+ E A LEA+AY + + G E W+ +++ A+++Y L S +++D
Sbjct: 119 VLGGEGSGANQTDVLEARAYAALLRGAEQLEKHSWEECLRSYSIARIIYSALASE-SKKD 177
Query: 203 ALLYKQKVEE-LTPSLRYCAYNI 224
+K + E + PS+RY AY +
Sbjct: 178 T--FKDLLSETIDPSIRYAAYQL 198
Score = 148 (57.2 bits), Expect = 4.2e-21, Sum P(2) = 4.2e-21
Identities = 77/311 (24%), Positives = 132/311 (42%)
Query: 285 LAERSLDASLG--QAGADKIELLESHLMDCKDAIQVIKEEVKQDPNSKNRTQGSGLSSLQ 342
LAE+ SL + A ++L + D DA + +E+K D ++ S + SL
Sbjct: 278 LAEKLSAGSLSPKEMAAAYDDVLAAS-QDSVDATKQAIDELKADGVTQG---DSRMQSLA 333
Query: 343 YLHSYLMYIRLERTIQRNLLLAQQ---AKDNLKTAGNGQQ-PSEGKKTRPQ------DLV 392
+ + Y + I RN +L+ + A T N ++ P++G+ RP+ L
Sbjct: 334 VTRTAVNYEMISWRIGRNRVLSGERDGAVVQKHTHSNKRRKPNDGEAERPKPEPVGRQLA 393
Query: 393 RL------YEIILQNLGELQQLSGMEDDAQYQESVEVRTKTYKAFRCFYIAESLAALRRW 446
RL Y+ I+Q+L +++L G+ D + + + ++A +C I S A +
Sbjct: 394 RLKEKTVLYDGIMQSLESIKELPGVAADDELSARLNATSSYFEALKCLAIGRSHAIVGNL 453
Query: 447 RDCVALYSRATAYASDAASSLPSSGELATLKPELATLEAAI-DSNKYSALAYSVLXXXXX 505
+ +AL A A A S+L A P L ++ + D L +
Sbjct: 454 VNSLALIKHALEQAQVAVSTLGKPSGSANA-PSLRNIDVSPQDVQSLGELLEGEVQRYRA 512
Query: 506 XXXXXXXVAKPGAKLKKV-----PLAERLGEYYEDPSLASKSPNVIKLPPDMQPIPAKPL 560
+ K G K+ PLA++L Y P+ N++ PP + IP KP+
Sbjct: 513 LVDIDN-MRKEG-KITATDDRLQPLADKLSRY---PARDVDLQNIVAYPPALGVIPMKPI 567
Query: 561 FFDLAQNQLEF 571
F DLA N +E+
Sbjct: 568 FLDLAFNYIEY 578
>POMBASE|SPCC1682.05c [details] [associations]
symbol:srp68 "signal recognition particle subunit
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005047
"signal recognition particle binding" evidence=IEA] [GO:0005786
"signal recognition particle, endoplasmic reticulum targeting"
evidence=ISO] [GO:0005829 "cytosol" evidence=IDA] [GO:0006617
"SRP-dependent cotranslational protein targeting to membrane,
signal sequence recognition" evidence=ISO] [GO:0008312 "7S RNA
binding" evidence=IEA] [GO:0030942 "endoplasmic reticulum signal
peptide binding" evidence=ISO] InterPro:IPR026258 PIRSF:PIRSF038995
PomBase:SPCC1682.05c GO:GO:0005829 EMBL:CU329672
GenomeReviews:CU329672_GR GO:GO:0008312 GO:GO:0005786 GO:GO:0006617
GO:GO:0005047 GO:GO:0030942 eggNOG:NOG325632 KO:K03107 PIR:T41062
RefSeq:NP_587798.1 STRING:O74436 EnsemblFungi:SPCC1682.05c.1
GeneID:2539391 KEGG:spo:SPCC1682.05c OMA:NEANGAS OrthoDB:EOG4CC794
NextBio:20800555 Uniprot:O74436
Length = 597
Score = 154 (59.3 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 89/418 (21%), Positives = 173/418 (41%)
Query: 80 HFKKREVTEQHLKDEKFIYIPLMLAERAWGYAMQLRQEANTEPRKKFHLVSRLRKAASYA 139
H +R + D+++ I L A+RA+ + LR ++ H + RL++A +
Sbjct: 95 HITQRGGKPKSSVDKRYAEILLFNADRAFQQFVFLRSS------QRRHALRRLKRADQFG 148
Query: 140 VQLQTLCEAEVC-DARTKLEAQAYVSWIVGVLHFELKLWKSAMKNLKEAQV---VYEKLM 195
+L + A C D LEA A+ +I G L++E + W+ ++ +++ V + +
Sbjct: 149 KELVSFTNAFDCNDHIFYLEAIAFAKYIEGTLNYEKRDWEGSLSAFSISRLSFLVLQNKI 208
Query: 196 SALNEEDALLYKQKVEELTPSLRYCAYNIG--DQAGIEDLMQLRSQTHGD--LLH--SLD 249
L E + + + ++ +LRY A G +Q D++ L S + + H S+D
Sbjct: 209 DTLAEHEKSVLGELQNQIDSNLRYVAQRTGLQNQTKSLDILMLSSIPKDEEVIQHVNSVD 268
Query: 250 SLMIQ---SKEHSAEVLSEVSWXXXXXXXXXXXXXXFLLAERSLDASLGQAGADKIELLE 306
S ++Q ++ S + ++ + W L A + S G + + LL
Sbjct: 269 SEILQMTGDEQDSLQTITVIEWRDQRVKIEHPDVVLALYAIHDVKNSPGTIDSKRDRLLA 328
Query: 307 SHLMDCKDAIQVIKEEVKQDPNSKNRTQGSGLSSLQYLHSYLMYIRLERTIQRNLLLAQQ 366
+ ++ + + + + K +T L ++YL Y + IQR+L +
Sbjct: 329 AWAR-AEEITKSVLDNTGLEDEQKFQT-------LSICYTYLAYNVVLLRIQRDLAVEN- 379
Query: 367 AKDNLKTAGNGQQPSEGKKTRPQDLVRLYEIILQNLGELQQLSGMEDDAQYQESVEVRTK 426
D+ A Q S LY+ I++N+ ++L G+ D +E +
Sbjct: 380 --DSELVASQAQLRSRQS---------LYDSIIKNIEIAKELPGIARDTGMTAQLEAQIS 428
Query: 427 TYKAFRCFYIAESLAALRRWRDCVALYSRATAYASDAASSLPSSGELATLKPELATLE 484
K+ RC IA++ A + +A+ RA +Y L + E KP L +
Sbjct: 429 LAKSKRCQAIADAYQAQDKLAS-LAMCVRAASYLQQVNDILRNFEE----KPHLIAFD 481
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.315 0.130 0.364 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 571 531 0.00092 119 3 11 23 0.42 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 18
No. of states in DFA: 611 (65 KB)
Total size of DFA: 286 KB (2150 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:07
No. of threads or processors used: 24
Search cpu time: 47.72u 0.07s 47.79t Elapsed: 00:00:31
Total cpu time: 47.73u 0.07s 47.80t Elapsed: 00:00:38
Start: Thu Aug 15 11:38:53 2013 End: Thu Aug 15 11:39:31 2013