BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy2473
(213 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1I84|S Chain S, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment.
pdb|1I84|V Chain V, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment
Length = 1184
Score = 181 bits (458), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 96/230 (41%), Positives = 132/230 (57%), Gaps = 52/230 (22%)
Query: 14 ANPILEAFGNAKTVKNDNSSRF----------------------VLHQSKGXXXXXXXXX 51
ANPILEAFGNAKTVKNDNSSRF +L +S+
Sbjct: 226 ANPILEAFGNAKTVKNDNSSRFGKFIRINFDVTGYIVGANIETYLLEKSRAIRQAKDERT 285
Query: 52 XXX-----XGATPEQRKEFILEDPKTYLFLSNGNLPVPGVDDAVEFQATVQAMNIMGMTN 106
GA+ + R + +LE Y FLSNG++P+P D FQ T++AM IMG T
Sbjct: 286 FHIFYYLIAGASEQMRNDLLLEGFNNYTFLSNGHVPIPAQQDDEMFQETLEAMTIMGFTE 345
Query: 107 EDYS-------------------------ASLPDNTVAQKIAKLLGLSITEMTKAFLKPR 141
E+ + AS+PDNT AQK+ L+G+++T+ T++ L PR
Sbjct: 346 EEQTSILRVVSSVLQLGNIVFKKERNTDQASMPDNTAAQKVCHLMGINVTDFTRSILTPR 405
Query: 142 IKVGRDFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSLDRTKRQ 191
IKVGRD V K+QTKEQ +FA+EA++KA +ER+FRW++ R+N++LD+TKRQ
Sbjct: 406 IKVGRDVVQKAQTKEQADFAIEALAKAKFERLFRWILTRVNKALDKTKRQ 455
>pdb|3DTP|B Chain B, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
Length = 973
Score = 179 bits (455), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 96/230 (41%), Positives = 132/230 (57%), Gaps = 52/230 (22%)
Query: 14 ANPILEAFGNAKTVKNDNSSRF----------------------VLHQSKGXXXXXXXXX 51
ANPILEAFGNAKTVKNDNSSRF +L +S+
Sbjct: 226 ANPILEAFGNAKTVKNDNSSRFGKFIRINFDVTGYIVGANIETYLLEKSRAIRQAKDERT 285
Query: 52 -----XXXXGATPEQRKEFILEDPKTYLFLSNGNLPVPGVDDAVEFQATVQAMNIMGMTN 106
GA+ + R + +LE Y FLSNG++P+P D FQ T++AM IMG T
Sbjct: 286 FHIFYYLIAGASEQMRNDLLLEGFNNYTFLSNGHVPIPAQQDDEMFQETLEAMTIMGFTE 345
Query: 107 EDYS-------------------------ASLPDNTVAQKIAKLLGLSITEMTKAFLKPR 141
E+ + AS+PDNT AQK+ L+G+++T+ T++ L PR
Sbjct: 346 EEQTSILRVVSSVLQLGNIVFKKERNTDQASMPDNTAAQKVCHLMGINVTDFTRSILTPR 405
Query: 142 IKVGRDFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSLDRTKRQ 191
IKVGRD V K+QTKEQ +FA+EA++KA +ER+FRW++ R+N++LD+TKRQ
Sbjct: 406 IKVGRDVVQKAQTKEQADFAIEALAKAKFERLFRWILTRVNKALDKTKRQ 455
>pdb|3DTP|A Chain A, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
Length = 971
Score = 179 bits (455), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 96/230 (41%), Positives = 132/230 (57%), Gaps = 52/230 (22%)
Query: 14 ANPILEAFGNAKTVKNDNSSRF----------------------VLHQSKGXXXXXXXXX 51
ANPILEAFGNAKTVKNDNSSRF +L +S+
Sbjct: 226 ANPILEAFGNAKTVKNDNSSRFGKFIRINFDVTGYIVGANIETYLLEKSRAIRQAKDERT 285
Query: 52 -----XXXXGATPEQRKEFILEDPKTYLFLSNGNLPVPGVDDAVEFQATVQAMNIMGMTN 106
GA+ + R + +LE Y FLSNG++P+P D FQ T++AM IMG T
Sbjct: 286 FHIFYYLIAGASEQMRNDLLLEGFNNYTFLSNGHVPIPAQQDDEMFQETLEAMTIMGFTE 345
Query: 107 EDYS-------------------------ASLPDNTVAQKIAKLLGLSITEMTKAFLKPR 141
E+ + AS+PDNT AQK+ L+G+++T+ T++ L PR
Sbjct: 346 EEQTSILRVVSSVLQLGNIVFKKERNTDQASMPDNTAAQKVCHLMGINVTDFTRSILTPR 405
Query: 142 IKVGRDFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSLDRTKRQ 191
IKVGRD V K+QTKEQ +FA+EA++KA +ER+FRW++ R+N++LD+TKRQ
Sbjct: 406 IKVGRDVVQKAQTKEQADFAIEALAKAKFERLFRWILTRVNKALDKTKRQ 455
>pdb|3J04|A Chain A, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
pdb|3J04|D Chain D, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
Length = 909
Score = 179 bits (455), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 96/230 (41%), Positives = 132/230 (57%), Gaps = 52/230 (22%)
Query: 14 ANPILEAFGNAKTVKNDNSSRF----------------------VLHQSKGXXXXXXXXX 51
ANPILEAFGNAKTVKNDNSSRF +L +S+
Sbjct: 226 ANPILEAFGNAKTVKNDNSSRFGKFIRINFDVTGYIVGANIETYLLEKSRAIRQAKDERT 285
Query: 52 -----XXXXGATPEQRKEFILEDPKTYLFLSNGNLPVPGVDDAVEFQATVQAMNIMGMTN 106
GA+ + R + +LE Y FLSNG++P+P D FQ T++AM IMG T
Sbjct: 286 FHIFYYLIAGASEQMRNDLLLEGFNNYTFLSNGHVPIPAQQDDEMFQETLEAMTIMGFTE 345
Query: 107 EDYS-------------------------ASLPDNTVAQKIAKLLGLSITEMTKAFLKPR 141
E+ + AS+PDNT AQK+ L+G+++T+ T++ L PR
Sbjct: 346 EEQTSILRVVSSVLQLGNIVFKKERNTDQASMPDNTAAQKVCHLMGINVTDFTRSILTPR 405
Query: 142 IKVGRDFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSLDRTKRQ 191
IKVGRD V K+QTKEQ +FA+EA++KA +ER+FRW++ R+N++LD+TKRQ
Sbjct: 406 IKVGRDVVQKAQTKEQADFAIEALAKAKFERLFRWILTRVNKALDKTKRQ 455
>pdb|1BR1|A Chain A, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|C Chain C, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|E Chain E, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|G Chain G, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR4|A Chain A, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|C Chain C, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|E Chain E, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|G Chain G, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
Length = 820
Score = 179 bits (453), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 96/230 (41%), Positives = 132/230 (57%), Gaps = 52/230 (22%)
Query: 14 ANPILEAFGNAKTVKNDNSSRF----------------------VLHQSKGXXXXXXXXX 51
ANPILEAFGNAKTVKNDNSSRF +L +S+
Sbjct: 226 ANPILEAFGNAKTVKNDNSSRFGKFIRINFDVTGYIVGANIETYLLEKSRAIRQAKDERT 285
Query: 52 XXX-----XGATPEQRKEFILEDPKTYLFLSNGNLPVPGVDDAVEFQATVQAMNIMGMTN 106
GA+ + R + +LE Y FLSNG++P+P D FQ T++AM IMG T
Sbjct: 286 FHIFYYLIAGASEQMRNDLLLEGFNNYTFLSNGHVPIPAQQDDEMFQETLEAMTIMGFTE 345
Query: 107 EDYS-------------------------ASLPDNTVAQKIAKLLGLSITEMTKAFLKPR 141
E+ + AS+PDNT AQK+ L+G+++T+ T++ L PR
Sbjct: 346 EEQTSILRVVSSVLQLGNIVFKKERNTDQASMPDNTAAQKVCHLMGINVTDFTRSILTPR 405
Query: 142 IKVGRDFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSLDRTKRQ 191
IKVGRD V K+QTKEQ +FA+EA++KA +ER+FRW++ R+N++LD+TKRQ
Sbjct: 406 IKVGRDVVQKAQTKEQADFAIEALAKAKFERLFRWILTRVNKALDKTKRQ 455
>pdb|1BR2|A Chain A, Smooth Muscle Myosin Motor Domain Complexed With
Mgadp.Alf4
pdb|1BR2|B Chain B, Smooth Muscle Myosin Motor Domain Complexed With
Mgadp.Alf4
pdb|1BR2|C Chain C, Smooth Muscle Myosin Motor Domain Complexed With
Mgadp.Alf4
pdb|1BR2|D Chain D, Smooth Muscle Myosin Motor Domain Complexed With
Mgadp.Alf4
pdb|1BR2|E Chain E, Smooth Muscle Myosin Motor Domain Complexed With
Mgadp.Alf4
pdb|1BR2|F Chain F, Smooth Muscle Myosin Motor Domain Complexed With
Mgadp.Alf4
Length = 791
Score = 179 bits (453), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 96/230 (41%), Positives = 132/230 (57%), Gaps = 52/230 (22%)
Query: 14 ANPILEAFGNAKTVKNDNSSRF----------------------VLHQSKGXXXXXXXXX 51
ANPILEAFGNAKTVKNDNSSRF +L +S+
Sbjct: 226 ANPILEAFGNAKTVKNDNSSRFGKFIRINFDVTGYIVGANIETYLLEKSRAIRQAKDERT 285
Query: 52 -----XXXXGATPEQRKEFILEDPKTYLFLSNGNLPVPGVDDAVEFQATVQAMNIMGMTN 106
GA+ + R + +LE Y FLSNG++P+P D FQ T++AM IMG T
Sbjct: 286 FHIFYYLIAGASEQMRNDLLLEGFNNYTFLSNGHVPIPAQQDDEMFQETLEAMTIMGFTE 345
Query: 107 EDYS-------------------------ASLPDNTVAQKIAKLLGLSITEMTKAFLKPR 141
E+ + AS+PDNT AQK+ L+G+++T+ T++ L PR
Sbjct: 346 EEQTSILRVVSSVLQLGNIVFKKERNTDQASMPDNTAAQKVCHLMGINVTDFTRSILTPR 405
Query: 142 IKVGRDFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSLDRTKRQ 191
IKVGRD V K+QTKEQ +FA+EA++KA +ER+FRW++ R+N++LD+TKRQ
Sbjct: 406 IKVGRDVVQKAQTKEQADFAIEALAKAKFERLFRWILTRVNKALDKTKRQ 455
>pdb|2YCU|A Chain A, Crystal Structure Of Human Non Muscle Myosin 2c In
Pre-power Stroke State
Length = 995
Score = 163 bits (413), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 92/230 (40%), Positives = 129/230 (56%), Gaps = 53/230 (23%)
Query: 14 ANPILEAFGNAKTVKNDNSSRF----------------------VLHQSKGXXXXXXXXX 51
ANPILEAFGNAKTVKNDNSSRF +L +S+
Sbjct: 196 ANPILEAFGNAKTVKNDNSSRFGKFIRINFDVAGYIVGANIETYLLEKSRAIRQAKDECS 255
Query: 52 -----XXXXGATPEQRKEFILEDPKTYLFLSNGNLPVPGVDDAVEFQATVQAMNIMGMTN 106
GA + + + +LE Y FL+NG PG + + FQ T++++ ++G ++
Sbjct: 256 FHIFYQLLGGAGEQLKADLLLEPCSHYRFLTNGPSSSPGQEREL-FQETLESLRVLGFSH 314
Query: 107 EDY-------------------------SASLPDNTVAQKIAKLLGLSITEMTKAFLKPR 141
E+ A++PDNT AQK+ +LLGL +T+ ++A L PR
Sbjct: 315 EEIISMLRMVSAVLQFGNIALKRERNTDQATMPDNTAAQKLCRLLGLGVTDFSRALLTPR 374
Query: 142 IKVGRDFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSLDRTKRQ 191
IKVGRD+V K+QTKEQ +FA+EA++KA YER+FRWLV R+NR+LDR+ RQ
Sbjct: 375 IKVGRDYVQKAQTKEQADFALEALAKATYERLFRWLVLRLNRALDRSPRQ 424
>pdb|2W4A|M Chain M, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4G|M Chain M, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
pdb|2W4H|M Chain M, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
Length = 840
Score = 124 bits (312), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 82/234 (35%), Positives = 114/234 (48%), Gaps = 53/234 (22%)
Query: 14 ANPILEAFGNAKTVKNDNSSRF-----VLHQSKGXXXXXXXXXXXXXGA-----TPEQRK 63
ANP+LEAFGNAKTV+NDNSSRF + + G + P +R
Sbjct: 222 ANPLLEAFGNAKTVRNDNSSRFGKFIRIHFGATGKLASADIETYLLEKSRVTFQLPAERS 281
Query: 64 EFIL------------------EDPKTYLFLSNGNLPVPGVDDAVEFQATVQAMNIMGMT 105
I +P Y ++S G + VP +DD E AT A++I+G +
Sbjct: 282 YHIFYQIMSNKKPELIDMLLITTNPYDYHYVSQGEITVPSIDDQEELMATDSAIDILGFS 341
Query: 106 NEDYSA------------------------SLPDNT-VAQKIAKLLGLSITEMTKAFLKP 140
++ +A + PD T VA K A L+GL+ E+ KA P
Sbjct: 342 ADEKTAIYKLTGAVMHYGNLKFKQKQREEQAEPDGTEVADKAAYLMGLNSAELLKALCYP 401
Query: 141 RIKVGRDFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSLDRTKRQVYF 194
R+KVG +FVTK QT QV +V A++KA YE+MF W+V RIN+ LD + + YF
Sbjct: 402 RVKVGNEFVTKGQTVSQVHNSVGALAKAVYEKMFLWMVIRINQQLDTKQPRQYF 455
>pdb|4DB1|A Chain A, Cardiac Human Myosin S1dc, Beta Isoform Complexed With
Mn-Amppnp
pdb|4DB1|B Chain B, Cardiac Human Myosin S1dc, Beta Isoform Complexed With
Mn-Amppnp
Length = 783
Score = 117 bits (294), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 78/234 (33%), Positives = 112/234 (47%), Gaps = 53/234 (22%)
Query: 14 ANPILEAFGNAKTVKNDNSSRF----------------------VLHQSKGXXXXXXXXX 51
ANP LEAFGNAKTV+NDNSSRF +L +S+
Sbjct: 223 ANPALEAFGNAKTVRNDNSSRFGKFIRIHFGATGKLASADIETYLLEKSRVIFQLKAERD 282
Query: 52 XXXXGATPEQRKEFILE------DPKTYLFLSNGNLPVPGVDDAVEFQATVQAMNIMGMT 105
+K +L+ +P Y F+S G V +DDA E AT A +++G T
Sbjct: 283 YHIFYQILSNKKPELLDMLLITNNPYDYAFISQGETTVASIDDAEELMATDNAFDVLGFT 342
Query: 106 NEDYSA------------------------SLPDNTV-AQKIAKLLGLSITEMTKAFLKP 140
+E+ ++ + PD T A K A L+GL+ ++ K P
Sbjct: 343 SEEKNSMYKLTGAIMHFGNMKFKLKQREEQAEPDGTEEADKSAYLMGLNSADLLKGLCHP 402
Query: 141 RIKVGRDFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSLDRTKRQVYF 194
R+KVG ++VTK Q +QV +A A++KA YERMF W+V RIN +L+ + + YF
Sbjct: 403 RVKVGNEYVTKGQNVQQVIYATGALAKAVYERMFNWMVTRINATLETKQPRQYF 456
>pdb|2OS8|A Chain A, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
pdb|2OTG|A Chain A, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
Length = 840
Score = 116 bits (291), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 81/242 (33%), Positives = 118/242 (48%), Gaps = 54/242 (22%)
Query: 14 ANPILEAFGNAKTVKNDNSSRF----------------------VLHQSK-----GXXXX 46
ANP+LEAFGNAKTV+N+NSSRF +L +S+
Sbjct: 223 ANPVLEAFGNAKTVRNNNSSRFGKFIRIHFGPTGKIAGADIETYLLEKSRVTYQQSAERN 282
Query: 47 XXXXXXXXXGATPEQRK-EFILEDPKTYLFLSNGNLPVPGVDDAVEFQATVQAMNIMGMT 105
A PE + I D Y F++ G L V +DD EF+ +A +I+G T
Sbjct: 283 YHIFYQICSNAIPELNEVMLITPDSGLYSFINQGCLTVDNIDDVEEFKLCDEAFDILGFT 342
Query: 106 NEDYSASL------------------------PDNTV-AQKIAKLLGLSITEMTKAFLKP 140
E+ ++ D T A+K+A L G++ ++ KA LKP
Sbjct: 343 KEEKTSMFKCTASILHMGEMKFKQRPREEQAESDGTAEAEKVAFLCGINAGDLLKALLKP 402
Query: 141 RIKVGRDFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSLD-RTKRQVYFKLINR 199
++KVG + VTK Q +QV +V A+SK+ Y+RMF WLV R+NR+LD + KR Y +++
Sbjct: 403 KVKVGTEMVTKGQNLQQVINSVGALSKSLYDRMFNWLVKRVNRTLDTKAKRNYYIGVLDI 462
Query: 200 YG 201
G
Sbjct: 463 AG 464
>pdb|3I5G|A Chain A, Crystal Structure Of Rigor-Like Squid Myosin S1
pdb|3I5H|A Chain A, The Crystal Structure Of Rigor Like Squid Myosin S1 In The
Absence Of Nucleotide
pdb|3I5I|A Chain A, The Crystal Structure Of Squid Myosin S1 In The Presence
Of So4 2-
pdb|3I5F|A Chain A, Crystal Structure Of Squid Mg.Adp Myosin S1
Length = 839
Score = 115 bits (288), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 75/240 (31%), Positives = 117/240 (48%), Gaps = 52/240 (21%)
Query: 14 ANPILEAFGNAKTVKNDNSSRF----------------------VLHQSK-----GXXXX 46
NP+LEA+GNAKT +N+NSSRF +L +S+
Sbjct: 227 CNPVLEAYGNAKTTRNNNSSRFGKFIRIHFGTQGKIAGADIETYLLEKSRVTYQQSAERN 286
Query: 47 XXXXXXXXXGATPEQ-RKEFILEDPKTYLFLSNGNLPVPGVDDAVEFQATVQAMNIMGMT 105
A PE K + DP Y F++ G L V G+DD E T A +++G T
Sbjct: 287 YHIFYQLLSPAFPENIEKILAVPDPGLYGFINQGTLTVDGIDDEEEMGLTDTAFDVLGFT 346
Query: 106 NED-----------------------YSASLPDNTVAQKIAKLLGLSITEMTKAFLKPRI 142
+E+ A A+K+A LLG++ ++ K LKP+I
Sbjct: 347 DEEKLSMYKCTGCILHLGEMKWKQRGEQAEADGTAEAEKVAFLLGVNAGDLLKCLLKPKI 406
Query: 143 KVGRDFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSLD-RTKRQVYFKLINRYG 201
KVG ++VT+ + K+QV ++ A++K+ Y+RMF WLV R+N++LD + KRQ + +++ G
Sbjct: 407 KVGTEYVTQGRNKDQVTNSIAALAKSLYDRMFNWLVRRVNQTLDTKAKRQFFIGVLDIAG 466
>pdb|2EC6|A Chain A, Placopecten Striated Muscle Myosin Ii
Length = 838
Score = 114 bits (284), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 79/242 (32%), Positives = 117/242 (48%), Gaps = 54/242 (22%)
Query: 14 ANPILEAFGNAKTVKNDNSSRF----------------------VLHQSK-----GXXXX 46
ANP+LEA+GNAKT +N+NSSRF +L +S+
Sbjct: 224 ANPVLEAYGNAKTTRNNNSSRFGKFIRIHFGPTGKIAGADIETYLLEKSRVTYQQSAERN 283
Query: 47 XXXXXXXXXGATPEQRK-EFILEDPKTYLFLSNGNLPVPGVDDAVEFQATVQAMNIMGMT 105
A PE + I D Y F++ G L V +DD EF+ +A +I+G T
Sbjct: 284 YHIFYQICSNAIPELNEVMLITPDSGLYSFINQGCLTVDNIDDVEEFKLCDEAFDILGFT 343
Query: 106 NEDYSASL------------------------PDNTV-AQKIAKLLGLSITEMTKAFLKP 140
E+ ++ D T A+K+A L G++ ++ KA LKP
Sbjct: 344 KEEKTSMFKCTASILHMGEMKFKQRPREEQAESDGTAEAEKVAFLCGINAGDLLKALLKP 403
Query: 141 RIKVGRDFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSLD-RTKRQVYFKLINR 199
++KVG + VTK Q +QV +V A+SK+ Y+RMF WLV R+NR+LD + KR Y +++
Sbjct: 404 KVKVGTEMVTKGQNLQQVINSVGALSKSLYDRMFNWLVKRVNRTLDTKAKRNYYIGVLDI 463
Query: 200 YG 201
G
Sbjct: 464 AG 465
>pdb|1QVI|A Chain A, Crystal Structure Of Scallop Myosin S1 In The Pre-Power
Stroke State To 2.6 Angstrom Resolution: Flexibility And
Function In The Head
pdb|1S5G|A Chain A, Structure Of Scallop Myosin S1 Reveals A Novel Nucleotide
Conformation
pdb|1SR6|A Chain A, Structure Of Nucleotide-free Scallop Myosin S1
Length = 840
Score = 110 bits (274), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 78/242 (32%), Positives = 118/242 (48%), Gaps = 54/242 (22%)
Query: 14 ANPILEAFGNAKTVKNDNSSRF----------------------VLHQSK-----GXXXX 46
ANP+LEA+GNAKT +N+NSSRF +L +S+
Sbjct: 222 ANPVLEAYGNAKTTRNNNSSRFGKFIRIHFGPTGKIAGADIETYLLEKSRVTYQQSAERN 281
Query: 47 XXXXXXXXXGATPEQRKEFIL-EDPKTYLFLSNGNLPVPGVDDAVEFQATVQAMNIMGMT 105
A PE ++ D Y F++ G L V +DD EF+ +A +I+G T
Sbjct: 282 YHIFYQICSNAIPELNDVMLVTPDSGLYSFINQGCLTVDNIDDVEEFKLCDEAFDILGFT 341
Query: 106 NED------YSASL------------------PDNTV-AQKIAKLLGLSITEMTKAFLKP 140
E+ +AS+ D T A+K+A L G++ ++ KA LKP
Sbjct: 342 KEEKQSMFKCTASILHMGEMKFKQRPREEQAESDGTAEAEKVAFLCGINAGDLLKALLKP 401
Query: 141 RIKVGRDFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSLD-RTKRQVYFKLINR 199
++KVG + VTK Q QV +V A++K+ Y+RMF WLV R+N++LD + KR Y +++
Sbjct: 402 KVKVGTEMVTKGQNMNQVVNSVGALAKSLYDRMFNWLVRRVNKTLDTKAKRNYYIGVLDI 461
Query: 200 YG 201
G
Sbjct: 462 AG 463
>pdb|1KK7|A Chain A, Scallop Myosin In The Near Rigor Conformation
pdb|1KK8|A Chain A, Scallop Myosin (S1-Adp-Befx) In The Actin-Detached
Conformation
Length = 837
Score = 110 bits (274), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 78/242 (32%), Positives = 118/242 (48%), Gaps = 54/242 (22%)
Query: 14 ANPILEAFGNAKTVKNDNSSRF----------------------VLHQSK-----GXXXX 46
ANP+LEA+GNAKT +N+NSSRF +L +S+
Sbjct: 222 ANPVLEAYGNAKTTRNNNSSRFGKFIRIHFGPTGKIAGADIETYLLEKSRVTYQQSAERN 281
Query: 47 XXXXXXXXXGATPEQRKEFIL-EDPKTYLFLSNGNLPVPGVDDAVEFQATVQAMNIMGMT 105
A PE ++ D Y F++ G L V +DD EF+ +A +I+G T
Sbjct: 282 YHIFYQICSNAIPELNDVMLVTPDSGLYSFINQGCLTVDNIDDVEEFKLCDEAFDILGFT 341
Query: 106 NED------YSASL------------------PDNTV-AQKIAKLLGLSITEMTKAFLKP 140
E+ +AS+ D T A+K+A L G++ ++ KA LKP
Sbjct: 342 KEEKQSMFKCTASILHMGEMKFKQRPREEQAESDGTAEAEKVAFLCGINAGDLLKALLKP 401
Query: 141 RIKVGRDFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSLD-RTKRQVYFKLINR 199
++KVG + VTK Q QV +V A++K+ Y+RMF WLV R+N++LD + KR Y +++
Sbjct: 402 KVKVGTEMVTKGQNMNQVVNSVGALAKSLYDRMFNWLVRRVNKTLDTKAKRNYYIGVLDI 461
Query: 200 YG 201
G
Sbjct: 462 AG 463
>pdb|1DFK|A Chain A, Nucleotide-Free Scallop Myosin S1-Near Rigor State
Length = 830
Score = 110 bits (274), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 78/242 (32%), Positives = 118/242 (48%), Gaps = 54/242 (22%)
Query: 14 ANPILEAFGNAKTVKNDNSSRF----------------------VLHQSK-----GXXXX 46
ANP+LEA+GNAKT +N+NSSRF +L +S+
Sbjct: 217 ANPVLEAYGNAKTTRNNNSSRFGKFIRIHFGPTGKIAGADIETYLLEKSRVTYQQSAERN 276
Query: 47 XXXXXXXXXGATPEQRKEFIL-EDPKTYLFLSNGNLPVPGVDDAVEFQATVQAMNIMGMT 105
A PE ++ D Y F++ G L V +DD EF+ +A +I+G T
Sbjct: 277 YHIFYQICSNAIPELNDVMLVTPDSGLYSFINQGCLTVDNIDDVEEFKLCDEAFDILGFT 336
Query: 106 NED------YSASL------------------PDNTV-AQKIAKLLGLSITEMTKAFLKP 140
E+ +AS+ D T A+K+A L G++ ++ KA LKP
Sbjct: 337 KEEKQSMFKCTASILHMGEMKFKQRPREEQAESDGTAEAEKVAFLCGINAGDLLKALLKP 396
Query: 141 RIKVGRDFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSLD-RTKRQVYFKLINR 199
++KVG + VTK Q QV +V A++K+ Y+RMF WLV R+N++LD + KR Y +++
Sbjct: 397 KVKVGTEMVTKGQNMNQVVNSVGALAKSLYDRMFNWLVRRVNKTLDTKAKRNYYIGVLDI 456
Query: 200 YG 201
G
Sbjct: 457 AG 458
>pdb|1B7T|A Chain A, Myosin Digested By Papain
pdb|1L2O|A Chain A, Scallop Myosin S1-Adp-P-Pdm In The Actin-Detached
Conformation
pdb|1KQM|A Chain A, Scallop Myosin S1-Amppnp In The Actin-Detached
Conformation
pdb|1KWO|A Chain A, Scallop Myosin S1-Atpgammas-P-Pdm In The Actin-Detached
Conformation
Length = 835
Score = 110 bits (274), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 78/242 (32%), Positives = 118/242 (48%), Gaps = 54/242 (22%)
Query: 14 ANPILEAFGNAKTVKNDNSSRF----------------------VLHQSK-----GXXXX 46
ANP+LEA+GNAKT +N+NSSRF +L +S+
Sbjct: 222 ANPVLEAYGNAKTTRNNNSSRFGKFIRIHFGPTGKIAGADIETYLLEKSRVTYQQSAERN 281
Query: 47 XXXXXXXXXGATPEQRKEFIL-EDPKTYLFLSNGNLPVPGVDDAVEFQATVQAMNIMGMT 105
A PE ++ D Y F++ G L V +DD EF+ +A +I+G T
Sbjct: 282 YHIFYQICSNAIPELNDVMLVTPDSGLYSFINQGCLTVDNIDDVEEFKLCDEAFDILGFT 341
Query: 106 NED------YSASL------------------PDNTV-AQKIAKLLGLSITEMTKAFLKP 140
E+ +AS+ D T A+K+A L G++ ++ KA LKP
Sbjct: 342 KEEKQSMFKCTASILHMGEMKFKQRPREEQAESDGTAEAEKVAFLCGINAGDLLKALLKP 401
Query: 141 RIKVGRDFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSLD-RTKRQVYFKLINR 199
++KVG + VTK Q QV +V A++K+ Y+RMF WLV R+N++LD + KR Y +++
Sbjct: 402 KVKVGTEMVTKGQNMNQVVNSVGALAKSLYDRMFNWLVRRVNKTLDTKAKRNYYIGVLDI 461
Query: 200 YG 201
G
Sbjct: 462 AG 463
>pdb|1DFL|A Chain A, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
pdb|1DFL|B Chain B, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
pdb|2W4T|C Chain C, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4V|C Chain C, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
pdb|2W4W|C Chain C, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
Length = 831
Score = 110 bits (274), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 78/242 (32%), Positives = 118/242 (48%), Gaps = 54/242 (22%)
Query: 14 ANPILEAFGNAKTVKNDNSSRF----------------------VLHQSK-----GXXXX 46
ANP+LEA+GNAKT +N+NSSRF +L +S+
Sbjct: 218 ANPVLEAYGNAKTTRNNNSSRFGKFIRIHFGPTGKIAGADIETYLLEKSRVTYQQSAERN 277
Query: 47 XXXXXXXXXGATPEQRKEFIL-EDPKTYLFLSNGNLPVPGVDDAVEFQATVQAMNIMGMT 105
A PE ++ D Y F++ G L V +DD EF+ +A +I+G T
Sbjct: 278 YHIFYQICSNAIPELNDVMLVTPDSGLYSFINQGCLTVDNIDDVEEFKLCDEAFDILGFT 337
Query: 106 NED------YSASL------------------PDNTV-AQKIAKLLGLSITEMTKAFLKP 140
E+ +AS+ D T A+K+A L G++ ++ KA LKP
Sbjct: 338 KEEKQSMFKCTASILHMGEMKFKQRPREEQAESDGTAEAEKVAFLCGINAGDLLKALLKP 397
Query: 141 RIKVGRDFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSLD-RTKRQVYFKLINR 199
++KVG + VTK Q QV +V A++K+ Y+RMF WLV R+N++LD + KR Y +++
Sbjct: 398 KVKVGTEMVTKGQNMNQVVNSVGALAKSLYDRMFNWLVRRVNKTLDTKAKRNYYIGVLDI 457
Query: 200 YG 201
G
Sbjct: 458 AG 459
>pdb|1M8Q|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|P Chain P, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|J Chain J, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|M Chain M, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|P Chain P, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|J Chain J, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|M Chain M, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|P Chain P, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|J Chain J, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|M Chain M, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|S Chain S, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|J Chain J, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|M Chain M, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|P Chain P, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|J Chain J, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|J Chain J, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|P Chain P, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|J Chain J, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|M Chain M, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|P Chain P, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|J Chain J, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|M Chain M, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|P Chain P, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|J Chain J, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|J Chain J, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|M Chain M, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|P Chain P, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
Length = 840
Score = 108 bits (269), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 74/234 (31%), Positives = 107/234 (45%), Gaps = 53/234 (22%)
Query: 14 ANPILEAFGNAKTVKNDNSSRF-----VLHQSKGXXXXXXXXXXXXXGA-----TPEQRK 63
ANP+LEAFGNA TV+NDNSSRF + + G + P +R
Sbjct: 222 ANPLLEAFGNAXTVRNDNSSRFGXFIRIHFGATGKLASADIETYLLEXSRVTFQLPAERS 281
Query: 64 EFIL------------------EDPKTYLFLSNGNLPVPGVDDAVEFQATVQAMNIMGMT 105
I +P Y ++S G + VP +DD E AT A++I+G +
Sbjct: 282 YHIFYQIMSNXXPELIDMLLITTNPYDYHYVSEGEITVPSIDDQEELMATDSAIDILGFS 341
Query: 106 NEDYSA------------------------SLPDNT-VAQKIAKLLGLSITEMTKAFLKP 140
++ +A + PD T VA A L+GL+ E+ KA P
Sbjct: 342 ADEXTAIYXLTGAVMHYGNLKFXQXQREEQAEPDGTEVADXAAYLMGLNSAELLKALCYP 401
Query: 141 RIKVGRDFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSLDRTKRQVYF 194
R+ VG + VT +T +V +V A++ A YE MF W+V RIN+ LD + + YF
Sbjct: 402 RVGVGNEAVTXGETVSEVHNSVGALAXAVYEXMFLWMVIRINQQLDTKQPRQYF 455
>pdb|2MYS|A Chain A, Myosin Subfragment-1, Alpha Carbon Coordinates Only For
The Two Light Chains
Length = 843
Score = 107 bits (268), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 74/234 (31%), Positives = 107/234 (45%), Gaps = 53/234 (22%)
Query: 14 ANPILEAFGNAKTVKNDNSSRF-----VLHQSKGXXXXXXXXXXXXXGA-----TPEQRK 63
ANP+LEAFGNA TV+NDNSSRF + + G + P +R
Sbjct: 225 ANPLLEAFGNAXTVRNDNSSRFGXFIRIHFGATGKLASADIETYLLEXSRVTFQLPAERS 284
Query: 64 EFIL------------------EDPKTYLFLSNGNLPVPGVDDAVEFQATVQAMNIMGMT 105
I +P Y ++S G + VP +DD E AT A++I+G +
Sbjct: 285 YHIFYQIMSNXXPELIDMLLITTNPYDYHYVSEGEITVPSIDDQEELMATDSAIDILGFS 344
Query: 106 NEDYSA------------------------SLPDNT-VAQKIAKLLGLSITEMTKAFLKP 140
++ +A + PD T VA A L+GL+ E+ KA P
Sbjct: 345 ADEXTAIYXLTGAVMHYGNLKFXQXQREEQAEPDGTEVADXAAYLMGLNSAELLKALCYP 404
Query: 141 RIKVGRDFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSLDRTKRQVYF 194
R+ VG + VT +T +V +V A++ A YE MF W+V RIN+ LD + + YF
Sbjct: 405 RVGVGNEAVTXGETVSEVHNSVGALAXAVYEXMFLWMVIRINQQLDTKQPRQYF 458
>pdb|3MKD|A Chain A, Crystal Structure Of Myosin-2 Dictyostelium Discoideum
Motor Domain S456y Mutant In Complex With
Adp-Orthovanadate
Length = 692
Score = 104 bits (260), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 72/241 (29%), Positives = 114/241 (47%), Gaps = 54/241 (22%)
Query: 14 ANPILEAFGNAKTVKNDNSSRF----------------------------VLHQSKGXXX 45
ANPILEAFGNAKT +N+NSSRF V+ QS+
Sbjct: 217 ANPILEAFGNAKTTRNNNSSRFGKFIEIQFNSAGFISGASIQSYLLEKSRVVFQSE-TER 275
Query: 46 XXXXXXXXXXGATPEQRKEFILEDPKTYLFLS-NGNLPVPGVDDAVEFQATVQAMNIMGM 104
GAT E++K L P+++ +L+ +G + + GV D+ EF+ T QAM+I+G
Sbjct: 276 NYHIFYQLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEFKITRQAMDIVGF 335
Query: 105 TNEDY------------------------SASLPDNTVAQKIAKLLGLSITEMTKAFLKP 140
+ E+ A L D T + + G++ + + KA ++P
Sbjct: 336 SQEEQMSIFKIIAGILHLGNIKFEKGAGEGAVLKDKTALNAASTVFGVNPSVLEKALMEP 395
Query: 141 RIKVGRDFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSLDRTKRQVYFKLINRY 200
RI GRD V + E+ + +A+ KA Y R+F WLV +IN L + ++ + +++ Y
Sbjct: 396 RILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLCQERKAYFIGVLDIY 455
Query: 201 G 201
G
Sbjct: 456 G 456
>pdb|1W9I|A Chain A, Myosin Ii Dictyostelium Discoideum Motor Domain S456y
Bound With Mgadp-Befx
Length = 770
Score = 104 bits (259), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 72/241 (29%), Positives = 114/241 (47%), Gaps = 54/241 (22%)
Query: 14 ANPILEAFGNAKTVKNDNSSRF----------------------------VLHQSKGXXX 45
ANPILEAFGNAKT +N+NSSRF V+ QS+
Sbjct: 218 ANPILEAFGNAKTTRNNNSSRFGKFIEIQFNSAGFISGASIQSYLLEKSRVVFQSE-TER 276
Query: 46 XXXXXXXXXXGATPEQRKEFILEDPKTYLFLS-NGNLPVPGVDDAVEFQATVQAMNIMGM 104
GAT E++K L P+++ +L+ +G + + GV D+ EF+ T QAM+I+G
Sbjct: 277 NYHIFYQLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEFKITRQAMDIVGF 336
Query: 105 TNEDY------------------------SASLPDNTVAQKIAKLLGLSITEMTKAFLKP 140
+ E+ A L D T + + G++ + + KA ++P
Sbjct: 337 SQEEQMSIFKIIAGILHLGNIKFEKGAGEGAVLKDKTALNAASTVFGVNPSVLEKALMEP 396
Query: 141 RIKVGRDFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSLDRTKRQVYFKLINRY 200
RI GRD V + E+ + +A+ KA Y R+F WLV +IN L + ++ + +++ Y
Sbjct: 397 RILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLCQERKAYFIGVLDIY 456
Query: 201 G 201
G
Sbjct: 457 G 457
>pdb|1W9J|A Chain A, Myosin Ii Dictyostelium Discoideum Motor Domain S456y
Bound With Mgadp-Alf4
Length = 770
Score = 104 bits (259), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 72/241 (29%), Positives = 114/241 (47%), Gaps = 54/241 (22%)
Query: 14 ANPILEAFGNAKTVKNDNSSRF----------------------------VLHQSKGXXX 45
ANPILEAFGNAKT +N+NSSRF V+ QS+
Sbjct: 218 ANPILEAFGNAKTTRNNNSSRFGKFIEIQFNSAGFISGASIQSYLLEKSRVVFQSE-TER 276
Query: 46 XXXXXXXXXXGATPEQRKEFILEDPKTYLFLS-NGNLPVPGVDDAVEFQATVQAMNIMGM 104
GAT E++K L P+++ +L+ +G + + GV D+ EF+ T QAM+I+G
Sbjct: 277 NYHIFYQLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEFKITRQAMDIVGF 336
Query: 105 TNEDY------------------------SASLPDNTVAQKIAKLLGLSITEMTKAFLKP 140
+ E+ A L D T + + G++ + + KA ++P
Sbjct: 337 SQEEQMSIFKIIAGILHLGNIKFEKGAGEGAVLKDKTALNAASTVFGVNPSVLEKALMEP 396
Query: 141 RIKVGRDFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSLDRTKRQVYFKLINRY 200
RI GRD V + E+ + +A+ KA Y R+F WLV +IN L + ++ + +++ Y
Sbjct: 397 RILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLCQERKAYFIGVLDIY 456
Query: 201 G 201
G
Sbjct: 457 G 457
>pdb|2Y9E|X Chain X, Structural Basis For The Allosteric Interference Of Myosin
Function By Mutants G680a And G680v Of Dictyostelium
Myosin-2
Length = 758
Score = 101 bits (252), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/234 (31%), Positives = 111/234 (47%), Gaps = 55/234 (23%)
Query: 14 ANPILEAFGNAKTVKNDNSSRF----------------------------VLHQSKGXXX 45
ANPILEAFGNAKT +N+NSSRF V+ QS+
Sbjct: 217 ANPILEAFGNAKTTRNNNSSRFGKFIEIQFNSAGFISGASIQSYLLEKSRVVFQSE-TER 275
Query: 46 XXXXXXXXXXGATPEQRKEFILEDPKTYLFLS-NGNLPVPGVDDAVEFQATVQAMNIMGM 104
GAT E++K L P+++ +L+ +G + + GV D+ EF+ T QAM+I+G
Sbjct: 276 NYHIFYQLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEFKITRQAMDIVGF 335
Query: 105 TNEDY------------------------SASLPDNTVAQKIAKLLGLSITEMTKAFLKP 140
+ E+ A L D T + + G++ + + KA ++P
Sbjct: 336 SQEEQMSIFKIIAGILHLGNIKFEKGAGEGAVLKDKTALNAASTVFGVNPSVLEKALMEP 395
Query: 141 RIKVGRDFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSLDRTKRQVYF 194
RI GRD V + E+ + +A+ KA Y R+F WLV +IN L + +R+ YF
Sbjct: 396 RILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLCQ-ERKAYF 448
>pdb|2Y0R|X Chain X, Structural Basis For The Allosteric Interference Of Myosin
Function By Mutants G680a And G680v Of Dictyostelium
Myosin-2
pdb|2Y8I|X Chain X, Structural Basis For The Allosteric Interference Of Myosin
Function By Mutants G680a And G680v Of Dictyostelium
Myosin-2
Length = 758
Score = 101 bits (252), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/234 (31%), Positives = 111/234 (47%), Gaps = 55/234 (23%)
Query: 14 ANPILEAFGNAKTVKNDNSSRF----------------------------VLHQSKGXXX 45
ANPILEAFGNAKT +N+NSSRF V+ QS+
Sbjct: 217 ANPILEAFGNAKTTRNNNSSRFGKFIEIQFNSAGFISGASIQSYLLEKSRVVFQSE-TER 275
Query: 46 XXXXXXXXXXGATPEQRKEFILEDPKTYLFLS-NGNLPVPGVDDAVEFQATVQAMNIMGM 104
GAT E++K L P+++ +L+ +G + + GV D+ EF+ T QAM+I+G
Sbjct: 276 NYHIFYQLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEFKITRQAMDIVGF 335
Query: 105 TNEDY------------------------SASLPDNTVAQKIAKLLGLSITEMTKAFLKP 140
+ E+ A L D T + + G++ + + KA ++P
Sbjct: 336 SQEEQMSIFKIIAGILHLGNIKFEKGAGEGAVLKDKTALNAASTVFGVNPSVLEKALMEP 395
Query: 141 RIKVGRDFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSLDRTKRQVYF 194
RI GRD V + E+ + +A+ KA Y R+F WLV +IN L + +R+ YF
Sbjct: 396 RILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLCQ-ERKAYF 448
>pdb|1D0X|A Chain A, Dictyostelium Myosin S1dc (Motor Domain Fragment)
Complexed With M-Nitrophenyl Aminoethyldiphosphate
Beryllium Trifluoride.
pdb|1D0Y|A Chain A, Dictyostelium Myosin S1dc (Motor Domain Fragment)
Complexed With O-Nitrophenyl Aminoethyldiphosphate
Beryllium Fluoride.
pdb|1D0Z|A Chain A, Dictyostelium Myosin S1dc (Motor Domain Fragment)
Complexed With P-Nitrophenyl Aminoethyldiphosphate
Beryllium Trifluoride.
pdb|1D1A|A Chain A, Dictyostelium Myosin S1dc (Motor Domain Fragment)
Complexed With O,P-Dinitrophenyl Aminoethyldiphosphate
Beryllium Trifluoride.
pdb|1D1B|A Chain A, Dictyostelium Myosin S1dc (Motor Domain Fragment)
Complexed With O,P-Dinitrophenyl Aminopropyldiphosphate
Beryllium Trifluoride.
pdb|1D1C|A Chain A, Dictyostelium Myosin S1dc (Motor Domain Fragment)
Complexed With N-Methyl-O-Nitrophenyl
Aminoethyldiphosphate Beryllium Trifluoride
Length = 761
Score = 101 bits (252), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/234 (31%), Positives = 111/234 (47%), Gaps = 55/234 (23%)
Query: 14 ANPILEAFGNAKTVKNDNSSRF----------------------------VLHQSKGXXX 45
ANPILEAFGNAKT +N+NSSRF V+ QS+
Sbjct: 218 ANPILEAFGNAKTTRNNNSSRFGKFIEIQFNNAGFISGASIQSYLLEKSRVVFQSE-TER 276
Query: 46 XXXXXXXXXXGATPEQRKEFILEDPKTYLFLS-NGNLPVPGVDDAVEFQATVQAMNIMGM 104
GAT E++K L P+++ +L+ +G + + GV D+ EF+ T QAM+I+G
Sbjct: 277 NYHIFYQLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEFKITRQAMDIVGF 336
Query: 105 TNEDY------------------------SASLPDNTVAQKIAKLLGLSITEMTKAFLKP 140
+ E+ A L D T + + G++ + + KA ++P
Sbjct: 337 SQEEQMSIFKIIAGILHLGNIKFEKGAGEGAVLKDKTALNAASTVFGVNPSVLEKALMEP 396
Query: 141 RIKVGRDFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSLDRTKRQVYF 194
RI GRD V + E+ + +A+ KA Y R+F WLV +IN L + +R+ YF
Sbjct: 397 RILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLCQ-ERKAYF 449
>pdb|1FMV|A Chain A, Crystal Structure Of The Apo Motor Domain Of
Dictyostellium Myosin Ii
pdb|1FMW|A Chain A, Crystal Structure Of The Mgatp Complex For The Motor
Domain Of Dictyostelium Myosin Ii
Length = 761
Score = 101 bits (252), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/234 (31%), Positives = 111/234 (47%), Gaps = 55/234 (23%)
Query: 14 ANPILEAFGNAKTVKNDNSSRF----------------------------VLHQSKGXXX 45
ANPILEAFGNAKT +N+NSSRF V+ QS+
Sbjct: 218 ANPILEAFGNAKTTRNNNSSRFGKFIEIQFNNAGFISGASIQSYLLEKSRVVFQSE-TER 276
Query: 46 XXXXXXXXXXGATPEQRKEFILEDPKTYLFLS-NGNLPVPGVDDAVEFQATVQAMNIMGM 104
GAT E++K L P+++ +L+ +G + + GV D+ EF+ T QAM+I+G
Sbjct: 277 NYHIFYQLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEFKITRQAMDIVGF 336
Query: 105 TNEDY------------------------SASLPDNTVAQKIAKLLGLSITEMTKAFLKP 140
+ E+ A L D T + + G++ + + KA ++P
Sbjct: 337 SQEEQMSIFKIIAGILHLGNIKFEKGAGEGAVLKDKTALNAASTVFGVNPSVLEKALMEP 396
Query: 141 RIKVGRDFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSLDRTKRQVYF 194
RI GRD V + E+ + +A+ KA Y R+F WLV +IN L + +R+ YF
Sbjct: 397 RILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLCQ-ERKAYF 449
>pdb|1MMA|A Chain A, X-Ray Structures Of The Mgadp, Mgatpgammas, And Mgamppnp
Complexes Of The Dictyostelium Discoideum Myosin Motor
Domain
Length = 762
Score = 101 bits (252), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/234 (31%), Positives = 111/234 (47%), Gaps = 55/234 (23%)
Query: 14 ANPILEAFGNAKTVKNDNSSRF----------------------------VLHQSKGXXX 45
ANPILEAFGNAKT +N+NSSRF V+ QS+
Sbjct: 218 ANPILEAFGNAKTTRNNNSSRFGKFIEIQFNNAGFISGASIQSYLLEKSRVVFQSE-TER 276
Query: 46 XXXXXXXXXXGATPEQRKEFILEDPKTYLFLS-NGNLPVPGVDDAVEFQATVQAMNIMGM 104
GAT E++K L P+++ +L+ +G + + GV D+ EF+ T QAM+I+G
Sbjct: 277 NYHIFYQLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEFKITRQAMDIVGF 336
Query: 105 TNEDY------------------------SASLPDNTVAQKIAKLLGLSITEMTKAFLKP 140
+ E+ A L D T + + G++ + + KA ++P
Sbjct: 337 SQEEQMSIFKIIAGILHLGNIKFEKGAGEGAVLKDKTALNAASTVFGVNPSVLEKALMEP 396
Query: 141 RIKVGRDFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSLDRTKRQVYF 194
RI GRD V + E+ + +A+ KA Y R+F WLV +IN L + +R+ YF
Sbjct: 397 RILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLCQ-ERKAYF 449
>pdb|2AKA|A Chain A, Structure Of The Nucleotide-Free Myosin Ii Motor Domain
From Dictyostelium Discoideum Fused To The Gtpase Domain
Of Dynamin 1 From Rattus Norvegicus
Length = 776
Score = 101 bits (252), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/234 (31%), Positives = 111/234 (47%), Gaps = 55/234 (23%)
Query: 14 ANPILEAFGNAKTVKNDNSSRF----------------------------VLHQSKGXXX 45
ANPILEAFGNAKT +N+NSSRF V+ QS+
Sbjct: 229 ANPILEAFGNAKTTRNNNSSRFGKFIEIQFNSAGFISGASIQSYLLEKSRVVFQSE-TER 287
Query: 46 XXXXXXXXXXGATPEQRKEFILEDPKTYLFLS-NGNLPVPGVDDAVEFQATVQAMNIMGM 104
GAT E++K L P+++ +L+ +G + + GV D+ EF+ T QAM+I+G
Sbjct: 288 NYHIFYQLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEFKITRQAMDIVGF 347
Query: 105 TNEDY------------------------SASLPDNTVAQKIAKLLGLSITEMTKAFLKP 140
+ E+ A L D T + + G++ + + KA ++P
Sbjct: 348 SQEEQMSIFKIIAGILHLGNIKFEKGAGEGAVLKDKTALNAASTVFGVNPSVLEKALMEP 407
Query: 141 RIKVGRDFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSLDRTKRQVYF 194
RI GRD V + E+ + +A+ KA Y R+F WLV +IN L + +R+ YF
Sbjct: 408 RILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLCQ-ERKAYF 460
>pdb|1JWY|A Chain A, Crystal Structure Of The Dynamin A Gtpase Domain Complexed
With Gdp, Determined As Myosin Fusion
pdb|1JX2|A Chain A, Crystal Structure Of The Nucleotide-Free Dynamin A Gtpase
Domain, Determined As Myosin Fusion
Length = 776
Score = 101 bits (252), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/234 (31%), Positives = 111/234 (47%), Gaps = 55/234 (23%)
Query: 14 ANPILEAFGNAKTVKNDNSSRF----------------------------VLHQSKGXXX 45
ANPILEAFGNAKT +N+NSSRF V+ QS+
Sbjct: 229 ANPILEAFGNAKTTRNNNSSRFGKFIEIQFNSAGFISGASIQSYLLEKSRVVFQSE-TER 287
Query: 46 XXXXXXXXXXGATPEQRKEFILEDPKTYLFLS-NGNLPVPGVDDAVEFQATVQAMNIMGM 104
GAT E++K L P+++ +L+ +G + + GV D+ EF+ T QAM+I+G
Sbjct: 288 NYHIFYQLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEFKITRQAMDIVGF 347
Query: 105 TNEDY------------------------SASLPDNTVAQKIAKLLGLSITEMTKAFLKP 140
+ E+ A L D T + + G++ + + KA ++P
Sbjct: 348 SQEEQMSIFKIIAGILHLGNIKFEKGAGEGAVLKDKTALNAASTVFGVNPSVLEKALMEP 407
Query: 141 RIKVGRDFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSLDRTKRQVYF 194
RI GRD V + E+ + +A+ KA Y R+F WLV +IN L + +R+ YF
Sbjct: 408 RILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLCQ-ERKAYF 460
>pdb|1W9L|A Chain A, Myosin Ii Dictyostelium Discoideum Motor Domain S456e
Bound With Mgadp-Alf4
Length = 770
Score = 101 bits (252), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/234 (31%), Positives = 111/234 (47%), Gaps = 55/234 (23%)
Query: 14 ANPILEAFGNAKTVKNDNSSRF----------------------------VLHQSKGXXX 45
ANPILEAFGNAKT +N+NSSRF V+ QS+
Sbjct: 218 ANPILEAFGNAKTTRNNNSSRFGKFIEIQFNSAGFISGASIQSYLLEKSRVVFQSE-TER 276
Query: 46 XXXXXXXXXXGATPEQRKEFILEDPKTYLFLS-NGNLPVPGVDDAVEFQATVQAMNIMGM 104
GAT E++K L P+++ +L+ +G + + GV D+ EF+ T QAM+I+G
Sbjct: 277 NYHIFYQLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEFKITRQAMDIVGF 336
Query: 105 TNEDY------------------------SASLPDNTVAQKIAKLLGLSITEMTKAFLKP 140
+ E+ A L D T + + G++ + + KA ++P
Sbjct: 337 SQEEQMSIFKIIAGILHLGNIKFEKGAGEGAVLKDKTALNAASTVFGVNPSVLEKALMEP 396
Query: 141 RIKVGRDFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSLDRTKRQVYF 194
RI GRD V + E+ + +A+ KA Y R+F WLV +IN L + +R+ YF
Sbjct: 397 RILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLCQ-ERKAYF 449
>pdb|1YV3|A Chain A, The Structural Basis Of Blebbistatin Inhibition And
Specificity For Myosin Ii
pdb|3BZ7|A Chain A, Crystal Structures Of (S)-(-)-Blebbistatin Analogs Bound
To Dictyostelium Discoideum Myosin Ii
pdb|3BZ8|A Chain A, Crystal Structures Of (S)-(-)-Blebbistatin Analogs Bound
To Dictyostelium Discoideum Myosin Ii
pdb|3BZ9|A Chain A, Crystal Structures Of (S)-(-)-Blebbistatin Analogs Bound
To Dictyostelium Discoideum Myosin Ii
Length = 762
Score = 101 bits (252), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/234 (31%), Positives = 111/234 (47%), Gaps = 55/234 (23%)
Query: 14 ANPILEAFGNAKTVKNDNSSRF----------------------------VLHQSKGXXX 45
ANPILEAFGNAKT +N+NSSRF V+ QS+
Sbjct: 218 ANPILEAFGNAKTTRNNNSSRFGKFIEIQFNSAGFISGASIQSYLLEKSRVVFQSE-TER 276
Query: 46 XXXXXXXXXXGATPEQRKEFILEDPKTYLFLS-NGNLPVPGVDDAVEFQATVQAMNIMGM 104
GAT E++K L P+++ +L+ +G + + GV D+ EF+ T QAM+I+G
Sbjct: 277 NYHIFYQLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEFKITRQAMDIVGF 336
Query: 105 TNEDY------------------------SASLPDNTVAQKIAKLLGLSITEMTKAFLKP 140
+ E+ A L D T + + G++ + + KA ++P
Sbjct: 337 SQEEQMSIFKIIAGILHLGNIKFEKGAGEGAVLKDKTALNAASTVFGVNPSVLEKALMEP 396
Query: 141 RIKVGRDFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSLDRTKRQVYF 194
RI GRD V + E+ + +A+ KA Y R+F WLV +IN L + +R+ YF
Sbjct: 397 RILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLCQ-ERKAYF 449
>pdb|2JHR|A Chain A, Crystal Structure Of Myosin-2 Motor Domain In Complex With
Adp-Metavanadate And Pentabromopseudilin
pdb|2JJ9|A Chain A, Crystal Structure Of Myosin-2 In Complex With Adp-
Metavanadate
pdb|3MJX|A Chain A, Crystal Structure Of Myosin-2 Motor Domain In Complex With
Adp- Metavanadate And Blebbistatin
Length = 788
Score = 101 bits (251), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 73/234 (31%), Positives = 111/234 (47%), Gaps = 55/234 (23%)
Query: 14 ANPILEAFGNAKTVKNDNSSRF----------------------------VLHQSKGXXX 45
ANPILEAFGNAKT +N+NSSRF V+ QS+
Sbjct: 229 ANPILEAFGNAKTTRNNNSSRFGKFIEIQFNSAGFISGASIQSYLLEKSRVVFQSE-TER 287
Query: 46 XXXXXXXXXXGATPEQRKEFILEDPKTYLFLS-NGNLPVPGVDDAVEFQATVQAMNIMGM 104
GAT E++K L P+++ +L+ +G + + GV D+ EF+ T QAM+I+G
Sbjct: 288 NYHIFYQLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEFKITRQAMDIVGF 347
Query: 105 TNEDY------------------------SASLPDNTVAQKIAKLLGLSITEMTKAFLKP 140
+ E+ A L D T + + G++ + + KA ++P
Sbjct: 348 SQEEQMSIFKIIAGILHLGNIKFEKGAGEGAVLKDKTALNAASTVFGVNPSVLEKALMEP 407
Query: 141 RIKVGRDFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSLDRTKRQVYF 194
RI GRD V + E+ + +A+ KA Y R+F WLV +IN L + +R+ YF
Sbjct: 408 RILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLCQ-ERKAYF 460
>pdb|3MNQ|A Chain A, Crystal Structure Of Myosin-2 Motor Domain In Complex With
Adp- Metavanadate And Resveratrol
Length = 788
Score = 101 bits (251), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 73/234 (31%), Positives = 111/234 (47%), Gaps = 55/234 (23%)
Query: 14 ANPILEAFGNAKTVKNDNSSRF----------------------------VLHQSKGXXX 45
ANPILEAFGNAKT +N+NSSRF V+ QS+
Sbjct: 229 ANPILEAFGNAKTTRNNNSSRFGKFIEIQFNSAGFISGASIQSYLLEKSRVVFQSE-TER 287
Query: 46 XXXXXXXXXXGATPEQRKEFILEDPKTYLFLS-NGNLPVPGVDDAVEFQATVQAMNIMGM 104
GAT E++K L P+++ +L+ +G + + GV D+ EF+ T QAM+I+G
Sbjct: 288 NYHIFYQLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEFKITRQAMDIVGF 347
Query: 105 TNEDY------------------------SASLPDNTVAQKIAKLLGLSITEMTKAFLKP 140
+ E+ A L D T + + G++ + + KA ++P
Sbjct: 348 SQEEQMSIFKIIAGILHLGNIKFEKGAGEGAVLKDKTALNAASTVFGVNPSVLEKALMEP 407
Query: 141 RIKVGRDFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSLDRTKRQVYF 194
RI GRD V + E+ + +A+ KA Y R+F WLV +IN L + +R+ YF
Sbjct: 408 RILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLCQ-ERKAYF 460
>pdb|2XEL|A Chain A, Molecular Mechanism Of Pentachloropseudilin Mediated
Inhibition Of Myosin Motor Activity
pdb|4AE3|A Chain A, Crystal Structure Of Ammosamide 272:myosin-2 Motor Domain
Complex
Length = 776
Score = 101 bits (251), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 73/234 (31%), Positives = 111/234 (47%), Gaps = 55/234 (23%)
Query: 14 ANPILEAFGNAKTVKNDNSSRF----------------------------VLHQSKGXXX 45
ANPILEAFGNAKT +N+NSSRF V+ QS+
Sbjct: 217 ANPILEAFGNAKTTRNNNSSRFGKFIEIQFNSAGFISGASIQSYLLEKSRVVFQSE-TER 275
Query: 46 XXXXXXXXXXGATPEQRKEFILEDPKTYLFLS-NGNLPVPGVDDAVEFQATVQAMNIMGM 104
GAT E++K L P+++ +L+ +G + + GV D+ EF+ T QAM+I+G
Sbjct: 276 NYHIFYQLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEFKITRQAMDIVGF 335
Query: 105 TNEDY------------------------SASLPDNTVAQKIAKLLGLSITEMTKAFLKP 140
+ E+ A L D T + + G++ + + KA ++P
Sbjct: 336 SQEEQMSIFKIIAGILHLGNIKFEKGAGEGAVLKDKTALNAASTVFGVNPSVLEKALMEP 395
Query: 141 RIKVGRDFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSLDRTKRQVYF 194
RI GRD V + E+ + +A+ KA Y R+F WLV +IN L + +R+ YF
Sbjct: 396 RILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLCQ-ERKAYF 448
>pdb|1W9K|A Chain A, Dictyostelium Discoideum Myosin Ii Motor Domain S456e With
Bound Mgadp-Befx
Length = 770
Score = 101 bits (251), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 73/234 (31%), Positives = 110/234 (47%), Gaps = 55/234 (23%)
Query: 14 ANPILEAFGNAKTVKNDNSSRF----------------------------VLHQSKGXXX 45
ANPILEAFGNAKT +N+NSSRF V+ QS+
Sbjct: 218 ANPILEAFGNAKTTRNNNSSRFGKFIEIQFNSAGFISGASIQSYLLEKSRVVFQSE-TER 276
Query: 46 XXXXXXXXXXGATPEQRKEFILEDPKTYLFLS-NGNLPVPGVDDAVEFQATVQAMNIMGM 104
GAT E++K L P+++ +L+ +G + + GV D+ EF+ T QAM+I+G
Sbjct: 277 NYHIFYQLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEFKITRQAMDIVGF 336
Query: 105 TNEDY------------------------SASLPDNTVAQKIAKLLGLSITEMTKAFLKP 140
+ E+ A L D T + + G++ + + KA ++P
Sbjct: 337 SQEEQMSIFKIIAGILHLGNIKFEKGAGEGAVLKDKTALNAASTVFGVNPSVLEKALMEP 396
Query: 141 RIKVGRDFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSLDRTKRQVYF 194
RI GRD V + E+ + +A+ KA Y R+F WLV +IN L +R+ YF
Sbjct: 397 RILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLCE-ERKAYF 449
>pdb|2X9H|A Chain A, Crystal Structure Of Myosin-2 Motor Domain In Complex With
Adp-Metavanadate And Pentachlorocarbazole
Length = 695
Score = 100 bits (249), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 73/234 (31%), Positives = 111/234 (47%), Gaps = 55/234 (23%)
Query: 14 ANPILEAFGNAKTVKNDNSSRF----------------------------VLHQSKGXXX 45
ANPILEAFGNAKT +N+NSSRF V+ QS+
Sbjct: 217 ANPILEAFGNAKTTRNNNSSRFGKFIEIQFNSAGFISGASIQSYLLEKSRVVFQSE-TER 275
Query: 46 XXXXXXXXXXGATPEQRKEFILEDPKTYLFLS-NGNLPVPGVDDAVEFQATVQAMNIMGM 104
GAT E++K L P+++ +L+ +G + + GV D+ EF+ T QAM+I+G
Sbjct: 276 NYHIFYQLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEFKITRQAMDIVGF 335
Query: 105 TNEDY------------------------SASLPDNTVAQKIAKLLGLSITEMTKAFLKP 140
+ E+ A L D T + + G++ + + KA ++P
Sbjct: 336 SQEEQMSIFKIIAGILHLGNIKFEKGAGEGAVLKDKTALNAASTVFGVNPSVLEKALMEP 395
Query: 141 RIKVGRDFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSLDRTKRQVYF 194
RI GRD V + E+ + +A+ KA Y R+F WLV +IN L + +R+ YF
Sbjct: 396 RILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVIKINNVLCQ-ERKAYF 448
>pdb|1MMN|A Chain A, X-Ray Structures Of The Mgadp, Mgatpgammas, And Mgamppnp
Complexes Of The Dictyostelium Discoideum Myosin Motor
Domain
Length = 762
Score = 100 bits (249), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 72/233 (30%), Positives = 110/233 (47%), Gaps = 53/233 (22%)
Query: 14 ANPILEAFGNAKTVKNDNSSRF----------------------VLHQSK-----GXXXX 46
ANPILEAFGNAKT +N+NSSRF +L +S+
Sbjct: 218 ANPILEAFGNAKTTRNNNSSRFGKFIEIQFNNAGFISGASIQSYLLEKSRVVFQSTTERN 277
Query: 47 XXXXXXXXXGATPEQRKEFILEDPKTYLFLS-NGNLPVPGVDDAVEFQATVQAMNIMGMT 105
GAT E++K L P+++ +L+ +G + + GV D EF+ T QAM+I+G +
Sbjct: 278 YHIFYQLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDEEEFKITRQAMDIVGFS 337
Query: 106 NEDY------------------------SASLPDNTVAQKIAKLLGLSITEMTKAFLKPR 141
E+ A L D T + + G++ + + KA ++PR
Sbjct: 338 QEEQMSIFKIIAGILHLGNIKFEKGAGEGAVLKDKTALNAASTVFGVNPSVLEKALMEPR 397
Query: 142 IKVGRDFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSLDRTKRQVYF 194
I GRD V + E+ + +A+ KA Y R+F WLV +IN L ++R+ YF
Sbjct: 398 ILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVL-CSERKAYF 449
>pdb|1LVK|A Chain A, X-Ray Crystal Structure Of The Mg (Dot) 2'(3')-O-(N-
Methylanthraniloyl) Nucleotide Bound To Dictyostelium
Discoideum Myosin Motor Domain
Length = 762
Score = 100 bits (249), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 72/233 (30%), Positives = 110/233 (47%), Gaps = 53/233 (22%)
Query: 14 ANPILEAFGNAKTVKNDNSSRF----------------------VLHQSK-----GXXXX 46
ANPILEAFGNAKT +N+NSSRF +L +S+
Sbjct: 218 ANPILEAFGNAKTTRNNNSSRFGKFIEIQFNNAGFISGASIQSYLLEKSRVVFQSTSERN 277
Query: 47 XXXXXXXXXGATPEQRKEFILEDPKTYLFLS-NGNLPVPGVDDAVEFQATVQAMNIMGMT 105
GAT E++K L P+++ +L+ +G + + GV D EF+ T QAM+I+G +
Sbjct: 278 YHIFYQLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDEDEFKITRQAMDIVGFS 337
Query: 106 NEDY------------------------SASLPDNTVAQKIAKLLGLSITEMTKAFLKPR 141
E+ A L D T + + G++ + + KA ++PR
Sbjct: 338 QEEQMSIFKIIAGILHLGNIKFEKGAGEGAVLKDKTALNAASTVFGVNPSVLEKALMEPR 397
Query: 142 IKVGRDFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSLDRTKRQVYF 194
I GRD V + E+ + +A+ KA Y R+F WLV +IN L ++R+ YF
Sbjct: 398 ILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVL-CSERKAYF 449
>pdb|1MMG|A Chain A, X-Ray Structures Of The Mgadp, Mgatpgammas, And Mgamppnp
Complexes Of The Dictyostelium Discoideum Myosin Motor
Domain
Length = 762
Score = 100 bits (248), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 72/233 (30%), Positives = 110/233 (47%), Gaps = 53/233 (22%)
Query: 14 ANPILEAFGNAKTVKNDNSSRF----------------------VLHQSK-----GXXXX 46
ANPILEAFGNAKT +N+NSSRF +L +S+
Sbjct: 218 ANPILEAFGNAKTTRNNNSSRFGKFIEIQFNNAGFISGASIQSYLLEKSRVVFQSTTERN 277
Query: 47 XXXXXXXXXGATPEQRKEFILEDPKTYLFLS-NGNLPVPGVDDAVEFQATVQAMNIMGMT 105
GAT E++K L P+++ +L+ +G + + GV D EF+ T QAM+I+G +
Sbjct: 278 YHIFYQLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDEDEFKITRQAMDIVGFS 337
Query: 106 NEDY------------------------SASLPDNTVAQKIAKLLGLSITEMTKAFLKPR 141
E+ A L D T + + G++ + + KA ++PR
Sbjct: 338 QEEQMSIFKIIAGILHLGNIKFEKGAGEGAVLKDKTALNAASTVFGVNPSVLEKALMEPR 397
Query: 142 IKVGRDFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSLDRTKRQVYF 194
I GRD V + E+ + +A+ KA Y R+F WLV +IN L ++R+ YF
Sbjct: 398 ILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVL-CSERKAYF 449
>pdb|3MYH|X Chain X, Insights Into The Importance Of Hydrogen Bonding In The
Gamma- Phosphate Binding Pocket Of Myosin: Structural
And Functional Studies Of Ser236
pdb|3MYK|X Chain X, Insights Into The Importance Of Hydrogen Bonding In The
Gamma- Phosphate Binding Pocket Of Myosin: Structural
And Functional Studies Of Ser236
pdb|3MYL|X Chain X, Insights Into The Importance Of Hydrogen Bonding In The
Gamma- Phosphate Binding Pocket Of Myosin: Structural
And Functional Studies Of Ser236
Length = 762
Score = 100 bits (248), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 72/234 (30%), Positives = 111/234 (47%), Gaps = 55/234 (23%)
Query: 14 ANPILEAFGNAKTVKNDNSSRF----------------------------VLHQSKGXXX 45
ANPILEAFGNAKT +N+N+SRF V+ QS+
Sbjct: 218 ANPILEAFGNAKTTRNNNASRFGKFIEIQFNSAGFISGASIQSYLLEKSRVVFQSE-TER 276
Query: 46 XXXXXXXXXXGATPEQRKEFILEDPKTYLFLS-NGNLPVPGVDDAVEFQATVQAMNIMGM 104
GAT E++K L P+++ +L+ +G + + GV D+ EF+ T QAM+I+G
Sbjct: 277 NYHIFYQLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEFKITRQAMDIVGF 336
Query: 105 TNEDY------------------------SASLPDNTVAQKIAKLLGLSITEMTKAFLKP 140
+ E+ A L D T + + G++ + + KA ++P
Sbjct: 337 SQEEQMSIFKIIAGILHLGNIKFEKGAGEGAVLKDKTALNAASTVFGVNPSVLEKALMEP 396
Query: 141 RIKVGRDFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSLDRTKRQVYF 194
RI GRD V + E+ + +A+ KA Y R+F WLV +IN L + +R+ YF
Sbjct: 397 RILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLCQ-ERKAYF 449
>pdb|1MMD|A Chain A, Truncated Head Of Myosin From Dictyostelium Discoideum
Complexed With Mgadp-Bef3
pdb|1MND|A Chain A, Truncated Head Of Myosin From Dictyostelium Discoideum
Complexed With Mgadp-Alf4
pdb|1MNE|A Chain A, Truncated Head Of Myosin From Dictyostelium Discoideum
Complexed With Mg-Pyrophosphate
pdb|1VOM|A Chain A, Complex Between Dictyostelium Myosin And Mgadp And
Vanadate At 1.9a Resolution
Length = 762
Score = 100 bits (248), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 73/234 (31%), Positives = 109/234 (46%), Gaps = 55/234 (23%)
Query: 14 ANPILEAFGNAKTVKNDNSSRF----------------------------VLHQSKGXXX 45
ANPILEAFGNAKT +N+NSSRF V+ QS+
Sbjct: 218 ANPILEAFGNAKTTRNNNSSRFGKFIEIQFNNAGFISGASIQSYLLEKSRVVFQSE-TER 276
Query: 46 XXXXXXXXXXGATPEQRKEFILEDPKTYLFLS-NGNLPVPGVDDAVEFQATVQAMNIMGM 104
GAT E++K L P+++ +L+ +G + + GV D EF+ T QAM+I+G
Sbjct: 277 NYHIFYQLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDEDEFKITRQAMDIVGF 336
Query: 105 TNEDY------------------------SASLPDNTVAQKIAKLLGLSITEMTKAFLKP 140
+ E+ A L D T + + G++ + + KA ++P
Sbjct: 337 SQEEQMSIFKIIAGILHLGNIKFEKGAGEGAVLKDKTALNAASTVFGVNPSVLEKALMEP 396
Query: 141 RIKVGRDFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSLDRTKRQVYF 194
RI GRD V + E+ + +A+ KA Y R+F WLV +IN L ++R YF
Sbjct: 397 RILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVL-CSERAAYF 449
>pdb|2XO8|A Chain A, Crystal Structure Of Myosin-2 In Complex With
Tribromodichloropseudilin
Length = 776
Score = 100 bits (248), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 73/234 (31%), Positives = 111/234 (47%), Gaps = 55/234 (23%)
Query: 14 ANPILEAFGNAKTVKNDNSSRF----------------------------VLHQSKGXXX 45
ANPILEAFGNAKT +N+NSSRF V+ QS+
Sbjct: 217 ANPILEAFGNAKTTRNNNSSRFGKFIEIQFNSAGFISGASIQSYLLEKSRVVFQSE-TER 275
Query: 46 XXXXXXXXXXGATPEQRKEFILEDPKTYLFLS-NGNLPVPGVDDAVEFQATVQAMNIMGM 104
GAT E++K L P+++ +L+ +G + + GV D+ EF+ T QAM+I+G
Sbjct: 276 NYHIFYQLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEFKITRQAMDIVGF 335
Query: 105 TNEDY------------------------SASLPDNTVAQKIAKLLGLSITEMTKAFLKP 140
+ E+ A L D T + + G++ + + KA ++P
Sbjct: 336 SQEEQMSIFKIIAGILHLGNIKFEKGAGEGAVLKDKTALNAASTVFGVNPSVLEKALMEP 395
Query: 141 RIKVGRDFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSLDRTKRQVYF 194
RI GRD V + E+ + +A+ KA Y R+F WLV +IN L + +R+ YF
Sbjct: 396 RILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVIKINNVLCQ-ERKAYF 448
>pdb|1G8X|A Chain A, Structure Of A Genetically Engineered Molecular Motor
pdb|1G8X|B Chain B, Structure Of A Genetically Engineered Molecular Motor
Length = 1010
Score = 98.6 bits (244), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/234 (30%), Positives = 109/234 (46%), Gaps = 55/234 (23%)
Query: 14 ANPILEAFGNAKTVKNDNSSRF----------------------------VLHQSKGXXX 45
ANPILEAFGNAKT +N+NSS F V+ QS+
Sbjct: 218 ANPILEAFGNAKTTRNNNSSEFGKFIEIQFNNAGFISGASIQSYLLEKSRVVFQSE-TER 276
Query: 46 XXXXXXXXXXGATPEQRKEFILEDPKTYLFLS-NGNLPVPGVDDAVEFQATVQAMNIMGM 104
GAT E++K L P+++ +L+ +G + + GV D EF+ T QAM+I+G
Sbjct: 277 NYHIFYQLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDEDEFKITRQAMDIVGF 336
Query: 105 TNEDY------------------------SASLPDNTVAQKIAKLLGLSITEMTKAFLKP 140
+ E+ A L D T + + G++ + + KA ++P
Sbjct: 337 SQEEQMSIFKIIAGILHLGNIKFEKGAGEGAVLKDKTALNAASTVFGVNPSVLEKALMEP 396
Query: 141 RIKVGRDFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSLDRTKRQVYF 194
RI GRD V + E+ + +A+ KA Y R+F WLV +IN L ++R+ YF
Sbjct: 397 RILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVL-CSERKAYF 449
>pdb|1W8J|A Chain A, Crystal Structure Of Myosin V Motor Domain -
Nucleotide-Free
pdb|1W8J|B Chain B, Crystal Structure Of Myosin V Motor Domain -
Nucleotide-Free
pdb|1W8J|C Chain C, Crystal Structure Of Myosin V Motor Domain -
Nucleotide-Free
pdb|1W8J|D Chain D, Crystal Structure Of Myosin V Motor Domain -
Nucleotide-Free
Length = 766
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 94/243 (38%), Gaps = 56/243 (23%)
Query: 14 ANPILEAFGNAKTVKNDNSSRF----------------------------VLHQSKGXXX 45
+NPI+E+ GNAKT +NDNSSRF V+ Q++
Sbjct: 199 SNPIMESIGNAKTTRNDNSSRFGKYIEIGFDKRYRIIGANMRTYLLEKSRVVFQAEEERN 258
Query: 46 XXXXXXXXXXGATPEQRKEFILEDPKTYLFLSNGNLPV-PGVDDAVEFQATVQAMNIMGM 104
A PE K L + + + G PV G+DDA E T QA ++G+
Sbjct: 259 YHIFYQLCASAALPE-FKTLRLGNANYFHYTKQGGSPVIDGIDDAKEMVNTRQACTLLGI 317
Query: 105 TNE-------------------------DYSASLPDNTVAQKIAKLLGLSITEMTKAFLK 139
++ D A P + L+G+ EM
Sbjct: 318 SDSYQMGIFRILAGILHLGNVEFASRDSDSCAIPPKHDPLTIFCDLMGVDYEEMAHWLCH 377
Query: 140 PRIKVGRDFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSLDRT-KRQVYFKLIN 198
++ + K +K A +A++K Y +F W+V+ +N++L T K+ + +++
Sbjct: 378 RKLATATETYIKPISKLHAINARDALAKHIYANLFNWIVDHVNKALHSTVKQHSFIGVLD 437
Query: 199 RYG 201
YG
Sbjct: 438 IYG 440
>pdb|1OE9|A Chain A, Crystal Structure Of Myosin V Motor With Essential Light
Chain - Nucleotide-Free
pdb|1W7I|A Chain A, Crystal Structure Of Myosin V Motor Without Nucleotide
Soaked In 10 Mm Mgadp
pdb|1W7J|A Chain A, Crystal Structure Of Myosin V Motor With Essential Light
Chain + Adp-Befx - Near Rigor
Length = 795
Score = 65.5 bits (158), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 94/243 (38%), Gaps = 56/243 (23%)
Query: 14 ANPILEAFGNAKTVKNDNSSRF----------------------------VLHQSKGXXX 45
+NPI+E+ GNAKT +NDNSSRF V+ Q++
Sbjct: 199 SNPIMESIGNAKTTRNDNSSRFGKYIEIGFDKRYRIIGANMRTYLLEKSRVVFQAEEERN 258
Query: 46 XXXXXXXXXXGATPEQRKEFILEDPKTYLFLSNGNLPV-PGVDDAVEFQATVQAMNIMGM 104
A PE K L + + + G PV G+DDA E T QA ++G+
Sbjct: 259 YHIFYQLCASAALPE-FKTLRLGNANYFHYTKQGGSPVIDGIDDAKEMVNTRQACTLLGI 317
Query: 105 TNE-------------------------DYSASLPDNTVAQKIAKLLGLSITEMTKAFLK 139
++ D A P + L+G+ EM
Sbjct: 318 SDSYQMGIFRILAGILHLGNVEFASRDSDSCAIPPKHDPLTIFCDLMGVDYEEMAHWLCH 377
Query: 140 PRIKVGRDFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSLDRT-KRQVYFKLIN 198
++ + K +K A +A++K Y +F W+V+ +N++L T K+ + +++
Sbjct: 378 RKLATATETYIKPISKLHAINARDALAKHIYANLFNWIVDHVNKALHSTVKQHSFIGVLD 437
Query: 199 RYG 201
YG
Sbjct: 438 IYG 440
>pdb|2DFS|A Chain A, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|M Chain M, 3-D Structure Of Myosin-V Inhibited State
Length = 1080
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 94/243 (38%), Gaps = 56/243 (23%)
Query: 14 ANPILEAFGNAKTVKNDNSSRF----------------------------VLHQSKGXXX 45
+NPI+E+ GNAKT +NDNSSRF V+ Q++
Sbjct: 199 SNPIMESIGNAKTTRNDNSSRFGKYIEIGFDKRYRIIGANMRTYLLEKSRVVFQAEEERN 258
Query: 46 XXXXXXXXXXGATPEQRKEFILEDPKTYLFLSNGNLPV-PGVDDAVEFQATVQAMNIMGM 104
A PE K L + + + G PV G+DDA E T QA ++G+
Sbjct: 259 YHIFYQLCASAALPE-FKTLRLGNANYFHYTKQGGSPVIDGIDDAKEMVNTRQACTLLGI 317
Query: 105 TNE-------------------------DYSASLPDNTVAQKIAKLLGLSITEMTKAFLK 139
++ D A P + L+G+ EM
Sbjct: 318 SDSYQMGIFRILAGILHLGNVEFASRDSDSCAIPPKHDPLTIFCDLMGVDYEEMAHWLCH 377
Query: 140 PRIKVGRDFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSLDRT-KRQVYFKLIN 198
++ + K +K A +A++K Y +F W+V+ +N++L T K+ + +++
Sbjct: 378 RKLATATETYIKPISKLHAINARDALAKHIYANLFNWIVDHVNKALHSTVKQHSFIGVLD 437
Query: 199 RYG 201
YG
Sbjct: 438 IYG 440
>pdb|4A7F|C Chain C, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 3)
pdb|4A7F|G Chain G, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 3)
pdb|4A7F|J Chain J, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 3)
pdb|4A7H|C Chain C, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 2)
pdb|4A7H|I Chain I, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 2)
pdb|4A7H|J Chain J, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 2)
pdb|4A7L|C Chain C, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 1)
pdb|4A7L|G Chain G, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 1)
pdb|4A7L|J Chain J, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 1)
Length = 697
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 96/251 (38%), Gaps = 63/251 (25%)
Query: 14 ANPILEAFGNAKTVKNDNSSRF----------VLHQSKGXXXXXXXXXXXXXGATPEQRK 63
+NP+LEAFGNAKT++NDNSSRF V G G T +R
Sbjct: 139 SNPLLEAFGNAKTLRNDNSSRFGKYMEMQFNAVGSPIGGKITNYLLEKSRVVGRTQGERS 198
Query: 64 EFIL------------------EDPKTYLFL-SNGNLPVPGVDDAVEFQATVQAMNIMGM 104
I + Y +L +G V +DD+ EF+ V+AM +G+
Sbjct: 199 FHIFYQMLKGLSQSKLDELGLTPNAPAYEYLKKSGCFDVSTIDDSGEFKIIVKAMETLGL 258
Query: 105 TNEDYSA-----------------------------SLPDNTVAQKIAKLLGLSITEMTK 135
D ++ + D A L ++
Sbjct: 259 KESDQNSIWRILAAILHIGNITFAEAAEQRTGTTTVKVSDTKSLAAAASCLKTDQQSLSI 318
Query: 136 AFLKPRIKVG----RDFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSLD-RTKR 190
A I G + ++ Q ++ +A++KA YER+F WLV++IN ++ T++
Sbjct: 319 ALCYRSISTGVGKRCEVISVPMDCNQAAYSRDALAKALYERLFNWLVSKINTIINCTTEK 378
Query: 191 QVYFKLINRYG 201
+++ YG
Sbjct: 379 GPVIGILDIYG 389
>pdb|1LKX|A Chain A, Motor Domain Of Myoe, A Class-I Myosin
pdb|1LKX|B Chain B, Motor Domain Of Myoe, A Class-I Myosin
pdb|1LKX|C Chain C, Motor Domain Of Myoe, A Class-I Myosin
pdb|1LKX|D Chain D, Motor Domain Of Myoe, A Class-I Myosin
Length = 697
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 95/251 (37%), Gaps = 63/251 (25%)
Query: 14 ANPILEAFGNAKTVKNDNSSRF----------VLHQSKGXXXXXXXXXXXXXGATPEQRK 63
+NP+LEAFGNAKT++NDNSSRF V G G T +R
Sbjct: 139 SNPLLEAFGNAKTLRNDNSSRFGKYMEMQFNAVGSPIGGKITNYLLEKSRVVGRTQGERS 198
Query: 64 EFIL------------------EDPKTYLFL-SNGNLPVPGVDDAVEFQATVQAMNIMGM 104
I + Y +L +G V +DD+ EF+ V+AM +G+
Sbjct: 199 FHIFYQMLKGLSQSKLDELGLTPNAPAYEYLKKSGCFDVSTIDDSGEFKIIVKAMETLGL 258
Query: 105 TNEDYSA-----------------------------SLPDNTVAQKIAKLLGLSITEMTK 135
D ++ + D A L ++
Sbjct: 259 KESDQNSIWRILAAILHIGNITFAEAAEQRTGTTTVKVSDTKSLAAAASCLKTDQQSLSI 318
Query: 136 AFLKPRIKVG----RDFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSLD-RTKR 190
A I G ++ Q ++ +A++KA YER+F WLV++IN ++ T++
Sbjct: 319 ALCYRSISTGVGKRCSVISVPMDCNQAAYSRDALAKALYERLFNWLVSKINTIINCTTEK 378
Query: 191 QVYFKLINRYG 201
+++ YG
Sbjct: 379 GPVIGILDIYG 389
>pdb|4DBQ|A Chain A, Myosin Vi D179y (md-insert2-cam, Delta-insert1) Post-rigor
State
Length = 788
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 96/234 (41%), Gaps = 63/234 (26%)
Query: 14 ANPILEAFGNAKTVKNDNSSRF----------------------VLHQSK-----GXXXX 46
ANP+LEAFGNAKTV+N+NSSRF +L +S+
Sbjct: 184 ANPLLEAFGNAKTVRNNNSSRFGKFVEIHFNEKSSVVGGFVSHYLLEKSRICVQGKEERN 243
Query: 47 XXXXXXXXXGATPEQRKEFILEDPKTYLFLS-NGNLPVPGVDDAVEFQATVQAMNIMGMT 105
GA+ + R+ L P + +L+ G+L P +DD +F AM +G+
Sbjct: 244 YHIFYRLCAGASEDIRERLHLSSPDNFRYLNRGGSLKDPLLDDHGDFIRMCTAMKKIGLD 303
Query: 106 NEDY--------------------------SASLPDNTVA--QKIAKLLGLSITEMTKAF 137
+E+ +L + + + A+LLGL ++ +
Sbjct: 304 DEEKLDLFRVVAGVLHLGNIDFEEAGSTSGGCNLKNKSTQALEYCAELLGLDQDDL-RVS 362
Query: 138 LKPRIKV-----GRDFVTKSQTK-EQVEFAVEAISKACYERMFRWLVNRINRSL 185
L R+ + + V K K EQ A +A++K Y +F +VNR+N+
Sbjct: 363 LTTRVMLTTAGGAKGTVIKVPLKVEQANNARDALAKTVYSHLFDHVVNRVNQCF 416
>pdb|2VAS|A Chain A, Myosin Vi (Md-Insert2-Cam, Delta-Insert1) Post-Rigor State
pdb|2VB6|A Chain A, Myosin Vi (Md-Insert2-Cam, Delta Insert1) Post-Rigor State
( Crystal Form 2)
Length = 788
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 96/234 (41%), Gaps = 63/234 (26%)
Query: 14 ANPILEAFGNAKTVKNDNSSRF----------------------VLHQSK-----GXXXX 46
ANP+LEAFGNAKTV+N+NSSRF +L +S+
Sbjct: 184 ANPLLEAFGNAKTVRNNNSSRFGKFVEIHFNEKSSVVGGFVSHYLLEKSRICVQGKEERN 243
Query: 47 XXXXXXXXXGATPEQRKEFILEDPKTYLFLS-NGNLPVPGVDDAVEFQATVQAMNIMGMT 105
GA+ + R+ L P + +L+ G+L P +DD +F AM +G+
Sbjct: 244 YHIFYRLCAGASEDIRERLHLSSPDNFRYLNRGGSLKDPLLDDHGDFIRMCTAMKKIGLD 303
Query: 106 NEDY--------------------------SASLPDNTVA--QKIAKLLGLSITEMTKAF 137
+E+ +L + + + A+LLGL ++ +
Sbjct: 304 DEEKLDLFRVVAGVLHLGNIDFEEAGSTSGGCNLKNKSTQALEYCAELLGLDQDDL-RVS 362
Query: 138 LKPRIKV-----GRDFVTKSQTK-EQVEFAVEAISKACYERMFRWLVNRINRSL 185
L R+ + + V K K EQ A +A++K Y +F +VNR+N+
Sbjct: 363 LTTRVMLTTAGGAKGTVIKVPLKVEQANNARDALAKTVYSHLFDHVVNRVNQCF 416
>pdb|2X51|A Chain A, M6 Delta Insert1
Length = 789
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 96/234 (41%), Gaps = 63/234 (26%)
Query: 14 ANPILEAFGNAKTVKNDNSSRF----------------------VLHQSK-----GXXXX 46
ANP+LEAFGNAKTV+N+NSSRF +L +S+
Sbjct: 185 ANPLLEAFGNAKTVRNNNSSRFGKFVEIHFNEKSSVVGGFVSHYLLEKSRICVQGKEERN 244
Query: 47 XXXXXXXXXGATPEQRKEFILEDPKTYLFLS-NGNLPVPGVDDAVEFQATVQAMNIMGMT 105
GA+ + R+ L P + +L+ G+L P +DD +F AM +G+
Sbjct: 245 YHIFYRLCAGASEDIRERLHLSSPDNFRYLNRGGSLKDPLLDDHGDFIRMCTAMKKIGLD 304
Query: 106 NEDY--------------------------SASLPDNTVA--QKIAKLLGLSITEMTKAF 137
+E+ +L + + + A+LLGL ++ +
Sbjct: 305 DEEKLDLFRVVAGVLHLGNIDFEEAGSTSGGCNLKNKSTQALEYCAELLGLDQDDL-RVS 363
Query: 138 LKPRIKV-----GRDFVTKSQTK-EQVEFAVEAISKACYERMFRWLVNRINRSL 185
L R+ + + V K K EQ A +A++K Y +F +VNR+N+
Sbjct: 364 LTTRVMLTTAGGAKGTVIKVPLKVEQANNARDALAKTVYSHLFDHVVNRVNQCF 417
>pdb|3L9I|A Chain A, Myosin Vi Nucleotide-Free (Mdinsert2) L310g Mutant Crystal
Structure
Length = 814
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 97/260 (37%), Gaps = 89/260 (34%)
Query: 14 ANPILEAFGNAKTVKNDNSSRF----------------------VLHQSK-----GXXXX 46
ANP+LEAFGNAKTV+N+NSSRF +L +S+
Sbjct: 184 ANPLLEAFGNAKTVRNNNSSRFGKFVEIHFNEKSSVVGGFVSHYLLEKSRICVQGKEERN 243
Query: 47 XXXXXXXXXGATPEQRKEFILEDPKTYLFLSN---------------------------G 79
GA+ + R+ L P + +L+ G
Sbjct: 244 YHIFYRLCAGASEDIRERLHLSSPDNFRYLNRGCTRYFANKETDKQILQNRKSPEYLKAG 303
Query: 80 NLPVPGVDDAVEFQATVQAMNIMGMTNEDY--------------------------SASL 113
+L PG+DD +F AM +G+ +E+ +L
Sbjct: 304 SLKDPGLDDHGDFIRMCTAMKKIGLDDEEKLDLFRVVAGVLHLGNIDFEEAGSTSGGCNL 363
Query: 114 PDNTVA--QKIAKLLGLSITEMTKAFLKPRIKV-----GRDFVTKSQTK-EQVEFAVEAI 165
+ + + A+LLGL ++ + L R+ + + V K K EQ A +A+
Sbjct: 364 KNKSTQALEYCAELLGLDQDDL-RVSLTTRVMLTTAGGAKGTVIKVPLKVEQANNARDAL 422
Query: 166 SKACYERMFRWLVNRINRSL 185
+K Y +F +VNR+N+
Sbjct: 423 AKTVYSHLFDHVVNRVNQCF 442
>pdb|2BKH|A Chain A, Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Structure
Length = 814
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 19/22 (86%), Positives = 22/22 (100%)
Query: 14 ANPILEAFGNAKTVKNDNSSRF 35
ANP+LEAFGNAKTV+N+NSSRF
Sbjct: 184 ANPLLEAFGNAKTVRNNNSSRF 205
Score = 32.3 bits (72), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 65/154 (42%), Gaps = 35/154 (22%)
Query: 66 ILEDPKTYLFLSNGNLPVPGVDDAVEFQATVQAMNIMGMTNEDY---------------- 109
IL++ K+ +L G+L P +DD +F AM +G+ +E+
Sbjct: 290 ILQNRKSPEYLKAGSLKDPLLDDHGDFIRMCTAMKKIGLDDEEKLDLFRVVAGVLHLGNI 349
Query: 110 ----------SASLPDNTVA--QKIAKLLGLSITEMTKAFLKPRIKV-----GRDFVTKS 152
+L + + + A+LLGL ++ + L R+ + + V K
Sbjct: 350 DFEEAGSTSGGCNLKNKSTQALEYCAELLGLDQDDL-RVSLTTRVMLTTAGGAKGTVIKV 408
Query: 153 QTK-EQVEFAVEAISKACYERMFRWLVNRINRSL 185
K EQ A +A++K Y +F +VNR+N+
Sbjct: 409 PLKVEQANNARDALAKTVYSHLFDHVVNRVNQCF 442
>pdb|2BKI|A Chain A, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
Length = 858
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 19/22 (86%), Positives = 22/22 (100%)
Query: 14 ANPILEAFGNAKTVKNDNSSRF 35
ANP+LEAFGNAKTV+N+NSSRF
Sbjct: 185 ANPLLEAFGNAKTVRNNNSSRF 206
Score = 32.3 bits (72), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 65/154 (42%), Gaps = 35/154 (22%)
Query: 66 ILEDPKTYLFLSNGNLPVPGVDDAVEFQATVQAMNIMGMTNEDY---------------- 109
IL++ K+ +L G+L P +DD +F AM +G+ +E+
Sbjct: 291 ILQNRKSPEYLKAGSLKDPLLDDHGDFIRMCTAMKKIGLDDEEKLDLFRVVAGVLHLGNI 350
Query: 110 ----------SASLPDNTVA--QKIAKLLGLSITEMTKAFLKPRIKV-----GRDFVTKS 152
+L + + + A+LLGL ++ + L R+ + + V K
Sbjct: 351 DFEEAGSTSGGCNLKNKSTQALEYCAELLGLDQDDL-RVSLTTRVMLTTAGGAKGTVIKV 409
Query: 153 QTK-EQVEFAVEAISKACYERMFRWLVNRINRSL 185
K EQ A +A++K Y +F +VNR+N+
Sbjct: 410 PLKVEQANNARDALAKTVYSHLFDHVVNRVNQCF 443
>pdb|4DBP|A Chain A, Myosin Vi Nucleotide-free (mdinsert2) D179y Crystal
Structure
Length = 814
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 19/22 (86%), Positives = 22/22 (100%)
Query: 14 ANPILEAFGNAKTVKNDNSSRF 35
ANP+LEAFGNAKTV+N+NSSRF
Sbjct: 184 ANPLLEAFGNAKTVRNNNSSRF 205
Score = 32.3 bits (72), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 65/154 (42%), Gaps = 35/154 (22%)
Query: 66 ILEDPKTYLFLSNGNLPVPGVDDAVEFQATVQAMNIMGMTNEDY---------------- 109
IL++ K+ +L G+L P +DD +F AM +G+ +E+
Sbjct: 290 ILQNRKSPEYLKAGSLKDPLLDDHGDFIRMCTAMKKIGLDDEEKLDLFRVVAGVLHLGNI 349
Query: 110 ----------SASLPDNTVA--QKIAKLLGLSITEMTKAFLKPRIKV-----GRDFVTKS 152
+L + + + A+LLGL ++ + L R+ + + V K
Sbjct: 350 DFEEAGSTSGGCNLKNKSTQALEYCAELLGLDQDDL-RVSLTTRVMLTTAGGAKGTVIKV 408
Query: 153 QTK-EQVEFAVEAISKACYERMFRWLVNRINRSL 185
K EQ A +A++K Y +F +VNR+N+
Sbjct: 409 PLKVEQANNARDALAKTVYSHLFDHVVNRVNQCF 442
>pdb|4DBR|A Chain A, Myosin Vi D179y (md) Pre-powerstroke State
Length = 786
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 19/22 (86%), Positives = 22/22 (100%)
Query: 14 ANPILEAFGNAKTVKNDNSSRF 35
ANP+LEAFGNAKTV+N+NSSRF
Sbjct: 182 ANPLLEAFGNAKTVRNNNSSRF 203
Score = 32.3 bits (72), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 65/154 (42%), Gaps = 35/154 (22%)
Query: 66 ILEDPKTYLFLSNGNLPVPGVDDAVEFQATVQAMNIMGMTNEDY---------------- 109
IL++ K+ +L G+L P +DD +F AM +G+ +E+
Sbjct: 288 ILQNRKSPEYLKAGSLKDPLLDDHGDFIRMCTAMKKIGLDDEEKLDLFRVVAGVLHLGNI 347
Query: 110 ----------SASLPDNTVA--QKIAKLLGLSITEMTKAFLKPRIKV-----GRDFVTKS 152
+L + + + A+LLGL ++ + L R+ + + V K
Sbjct: 348 DFEEAGSTSGGCNLKNKSTQALEYCAELLGLDQDDL-RVSLTTRVMLTTAGGAKGTVIKV 406
Query: 153 QTK-EQVEFAVEAISKACYERMFRWLVNRINRSL 185
K EQ A +A++K Y +F +VNR+N+
Sbjct: 407 PLKVEQANNARDALAKTVYSHLFDHVVNRVNQCF 440
>pdb|4E7S|A Chain A, Myosin Vi D23r I24r R569e (Md) Pre-Powerstroke State
pdb|4E7S|B Chain B, Myosin Vi D23r I24r R569e (Md) Pre-Powerstroke State
Length = 798
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 19/22 (86%), Positives = 22/22 (100%)
Query: 14 ANPILEAFGNAKTVKNDNSSRF 35
ANP+LEAFGNAKTV+N+NSSRF
Sbjct: 194 ANPLLEAFGNAKTVRNNNSSRF 215
Score = 32.3 bits (72), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 65/154 (42%), Gaps = 35/154 (22%)
Query: 66 ILEDPKTYLFLSNGNLPVPGVDDAVEFQATVQAMNIMGMTNEDY---------------- 109
IL++ K+ +L G+L P +DD +F AM +G+ +E+
Sbjct: 300 ILQNRKSPEYLKAGSLKDPLLDDHGDFIRMCTAMKKIGLDDEEKLDLFRVVAGVLHLGNI 359
Query: 110 ----------SASLPDNTVA--QKIAKLLGLSITEMTKAFLKPRIKV-----GRDFVTKS 152
+L + + + A+LLGL ++ + L R+ + + V K
Sbjct: 360 DFEEAGSTSGGCNLKNKSTQALEYCAELLGLDQDDL-RVSLTTRVMLTTAGGAKGTVIKV 418
Query: 153 QTK-EQVEFAVEAISKACYERMFRWLVNRINRSL 185
K EQ A +A++K Y +F +VNR+N+
Sbjct: 419 PLKVEQANNARDALAKTVYSHLFDHVVNRVNQCF 452
>pdb|4E7Z|A Chain A, Myosin Vi (Md) Pre-Powerstroke State, P21 Crystal Form
pdb|4E7Z|B Chain B, Myosin Vi (Md) Pre-Powerstroke State, P21 Crystal Form
Length = 798
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 19/22 (86%), Positives = 22/22 (100%)
Query: 14 ANPILEAFGNAKTVKNDNSSRF 35
ANP+LEAFGNAKTV+N+NSSRF
Sbjct: 194 ANPLLEAFGNAKTVRNNNSSRF 215
Score = 32.3 bits (72), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 65/154 (42%), Gaps = 35/154 (22%)
Query: 66 ILEDPKTYLFLSNGNLPVPGVDDAVEFQATVQAMNIMGMTNEDY---------------- 109
IL++ K+ +L G+L P +DD +F AM +G+ +E+
Sbjct: 300 ILQNRKSPEYLKAGSLKDPLLDDHGDFIRMCTAMKKIGLDDEEKLDLFRVVAGVLHLGNI 359
Query: 110 ----------SASLPDNTVA--QKIAKLLGLSITEMTKAFLKPRIKV-----GRDFVTKS 152
+L + + + A+LLGL ++ + L R+ + + V K
Sbjct: 360 DFEEAGSTSGGCNLKNKSTQALEYCAELLGLDQDDL-RVSLTTRVMLTTAGGAKGTVIKV 418
Query: 153 QTK-EQVEFAVEAISKACYERMFRWLVNRINRSL 185
K EQ A +A++K Y +F +VNR+N+
Sbjct: 419 PLKVEQANNARDALAKTVYSHLFDHVVNRVNQCF 452
>pdb|2V26|A Chain A, Myosin Vi (Md) Pre-Powerstroke State (Mg.Adp.Vo4)
Length = 784
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 19/22 (86%), Positives = 22/22 (100%)
Query: 14 ANPILEAFGNAKTVKNDNSSRF 35
ANP+LEAFGNAKTV+N+NSSRF
Sbjct: 181 ANPLLEAFGNAKTVRNNNSSRF 202
Score = 32.3 bits (72), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 65/154 (42%), Gaps = 35/154 (22%)
Query: 66 ILEDPKTYLFLSNGNLPVPGVDDAVEFQATVQAMNIMGMTNEDY---------------- 109
IL++ K+ +L G+L P +DD +F AM +G+ +E+
Sbjct: 287 ILQNRKSPEYLKAGSLKDPLLDDHGDFIRMCTAMKKIGLDDEEKLDLFRVVAGVLHLGNI 346
Query: 110 ----------SASLPDNTVA--QKIAKLLGLSITEMTKAFLKPRIKV-----GRDFVTKS 152
+L + + + A+LLGL ++ + L R+ + + V K
Sbjct: 347 DFEEAGSTSGGCNLKNKSTQALEYCAELLGLDQDDL-RVSLTTRVMLTTAGGAKGTVIKV 405
Query: 153 QTK-EQVEFAVEAISKACYERMFRWLVNRINRSL 185
K EQ A +A++K Y +F +VNR+N+
Sbjct: 406 PLKVEQANNARDALAKTVYSHLFDHVVNRVNQCF 439
>pdb|4ANJ|A Chain A, Myosin Vi (Mdinsert2-Gfp Fusion) Pre-Powerstroke State
(Mg.Adp.Alf4)
Length = 1052
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 19/22 (86%), Positives = 22/22 (100%)
Query: 14 ANPILEAFGNAKTVKNDNSSRF 35
ANP+LEAFGNAKTV+N+NSSRF
Sbjct: 185 ANPLLEAFGNAKTVRNNNSSRF 206
Score = 32.3 bits (72), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 65/154 (42%), Gaps = 35/154 (22%)
Query: 66 ILEDPKTYLFLSNGNLPVPGVDDAVEFQATVQAMNIMGMTNEDY---------------- 109
IL++ K+ +L G+L P +DD +F AM +G+ +E+
Sbjct: 291 ILQNRKSPEYLKAGSLKDPLLDDHGDFIRMCTAMKKIGLDDEEKLDLFRVVAGVLHLGNI 350
Query: 110 ----------SASLPDNTVA--QKIAKLLGLSITEMTKAFLKPRIKV-----GRDFVTKS 152
+L + + + A+LLGL ++ + L R+ + + V K
Sbjct: 351 DFEEAGSTSGGCNLKNKSTQALEYCAELLGLDQDDL-RVSLTTRVMLTTAGGAKGTVIKV 409
Query: 153 QTK-EQVEFAVEAISKACYERMFRWLVNRINRSL 185
K EQ A +A++K Y +F +VNR+N+
Sbjct: 410 PLKVEQANNARDALAKTVYSHLFDHVVNRVNQCF 443
>pdb|3L44|A Chain A, Crystal Structure Of Bacillus Anthracis Heml-1, Glutamate
Semialdehyde Aminotransferase
pdb|3L44|B Chain B, Crystal Structure Of Bacillus Anthracis Heml-1, Glutamate
Semialdehyde Aminotransferase
Length = 434
Score = 29.3 bits (64), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 5/64 (7%)
Query: 105 TNEDYSASLPDNTVAQKIAKLLGLSITEMTKAFLKPRIKVGRDFVTKSQTKEQVEFAVEA 164
T EDY A+ +T + K L + E L P K F+T TKE +E+ +EA
Sbjct: 368 TIEDYDAA--QDTDGEXFGKFFKLXLQEGVN--LAPS-KYEAWFLTTEHTKEDIEYTIEA 422
Query: 165 ISKA 168
+ +A
Sbjct: 423 VGRA 426
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.134 0.380
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,847,687
Number of Sequences: 62578
Number of extensions: 159243
Number of successful extensions: 506
Number of sequences better than 100.0: 63
Number of HSP's better than 100.0 without gapping: 61
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 328
Number of HSP's gapped (non-prelim): 137
length of query: 213
length of database: 14,973,337
effective HSP length: 95
effective length of query: 118
effective length of database: 9,028,427
effective search space: 1065354386
effective search space used: 1065354386
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 49 (23.5 bits)