Query psy2473
Match_columns 213
No_of_seqs 134 out of 1114
Neff 7.9
Searched_HMMs 13730
Date Fri Aug 16 17:11:48 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy2473.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/2473hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1d0xa2 c.37.1.9 (A:2-33,A:80- 100.0 4.4E-59 3.2E-63 436.2 20.0 203 5-213 162-416 (712)
2 d1br2a2 c.37.1.9 (A:80-789) My 100.0 7.3E-58 5.3E-62 428.7 17.7 205 5-213 139-395 (710)
3 d2mysa2 c.37.1.9 (A:4-33,A:80- 100.0 1.4E-57 9.9E-62 430.8 18.9 205 4-213 166-423 (794)
4 d1kk8a2 c.37.1.9 (A:1-28,A:77- 100.0 2E-57 1.4E-61 429.5 20.0 204 5-213 165-421 (789)
5 d1w7ja2 c.37.1.9 (A:63-792) My 100.0 1.2E-56 9.1E-61 421.7 19.5 205 4-213 127-384 (730)
6 d1lkxa_ c.37.1.9 (A:) Myosin S 100.0 9.1E-56 6.6E-60 412.8 18.9 204 5-213 122-387 (684)
7 d2r1jl1 a.35.1.2 (L:3-68) P22 82.1 0.61 4.4E-05 28.0 3.3 42 94-135 7-64 (66)
8 d2croa_ a.35.1.2 (A:) cro 434 80.0 0.48 3.5E-05 28.4 2.3 41 94-135 7-63 (65)
9 d1r69a_ a.35.1.2 (A:) 434 C1 r 79.0 0.54 3.9E-05 27.9 2.2 42 94-135 5-61 (63)
10 d2b5aa1 a.35.1.3 (A:1-77) Regu 75.4 1.4 0.00011 27.0 3.7 41 95-135 15-71 (77)
11 d1b0na2 a.35.1.3 (A:1-68) SinR 74.9 1.7 0.00012 26.0 3.8 23 113-135 41-63 (68)
12 d1y7ya1 a.35.1.3 (A:5-73) Rest 72.5 0.76 5.6E-05 27.8 1.7 40 94-133 13-68 (69)
13 d1u3em2 d.285.1.1 (M:106-174) 71.5 2.9 0.00021 25.1 4.0 33 118-150 32-64 (69)
14 d2icta1 a.35.1.3 (A:8-94) Anti 70.1 2.3 0.00017 26.9 3.7 41 95-135 6-62 (87)
15 d1y9qa1 a.35.1.8 (A:4-82) Prob 69.6 0.96 7E-05 28.0 1.7 42 93-134 11-68 (79)
16 d1utxa_ a.35.1.3 (A:) Putative 66.6 2.6 0.00019 25.0 3.3 23 112-134 39-61 (66)
17 d2fi0a1 a.248.1.1 (A:3-81) Hyp 57.5 3.1 0.00023 26.1 2.4 46 89-140 17-71 (79)
18 d1lmb3_ a.35.1.2 (3:) lambda C 55.6 3.1 0.00023 26.2 2.3 48 88-135 9-73 (87)
19 d1umqa_ a.4.1.12 (A:) Photosyn 51.7 18 0.0013 20.8 5.3 39 89-140 19-57 (60)
20 d2ou3a1 a.287.1.1 (A:1-160) Te 32.9 20 0.0014 24.6 3.8 21 117-137 116-136 (160)
21 d1ufma_ a.4.5.47 (A:) COP9 sig 32.4 15 0.0011 22.8 2.7 22 118-139 32-53 (84)
22 d1u0ma2 c.95.1.2 (A:202-349) P 28.8 21 0.0016 24.3 3.3 45 92-136 46-93 (148)
23 d2ofya1 a.35.1.3 (A:3-84) Puta 27.7 20 0.0014 22.0 2.6 27 113-139 52-78 (82)
24 d1dwka1 a.35.1.4 (A:1-86) Cyan 27.5 32 0.0024 21.5 3.7 23 114-136 53-75 (86)
25 d1au7a1 a.4.1.1 (A:103-160) Pi 27.1 26 0.0019 19.9 3.0 29 113-141 23-51 (58)
26 d1zk8a1 a.4.1.9 (A:6-77) Trans 25.4 58 0.0043 18.6 4.9 45 118-184 25-69 (72)
27 d1u6ea2 c.95.1.2 (A:175-317) K 25.2 32 0.0023 23.3 3.7 40 94-133 53-95 (148)
28 d1sfxa_ a.4.5.50 (A:) Hypothet 24.9 12 0.00085 24.2 1.1 46 92-137 6-55 (109)
29 d1e3oc1 a.4.1.1 (C:104-160) Oc 24.3 32 0.0023 19.4 3.0 29 113-141 22-50 (57)
30 d2auwa1 a.35.1.10 (A:88-154) H 24.2 54 0.0039 19.2 4.1 32 95-139 6-37 (67)
31 d1hnja2 c.95.1.2 (A:175-317) K 24.2 37 0.0027 22.8 3.9 41 94-134 49-92 (143)
32 d2ppxa1 a.35.1.3 (A:30-91) Unc 23.5 54 0.0039 18.5 4.0 33 95-140 4-36 (62)
33 d2oi8a1 a.4.1.9 (A:8-86) Putat 23.4 67 0.0049 18.7 5.1 46 118-185 31-76 (79)
34 d2cqxa1 a.4.1.1 (A:8-66) LAG1 23.4 34 0.0025 19.5 3.0 29 113-141 26-54 (59)
35 d1le8a_ a.4.1.1 (A:) Mating ty 23.3 34 0.0025 18.9 2.9 29 113-141 21-49 (53)
36 d1kska3 d.66.1.5 (A:1-59) Pseu 23.3 52 0.0038 18.4 3.9 33 121-153 6-38 (59)
37 d1lvaa3 a.4.5.35 (A:511-574) C 23.0 44 0.0032 19.2 3.5 41 88-138 5-45 (64)
38 d1l0oc_ a.4.13.2 (C:) SigmaF { 22.2 35 0.0025 19.2 2.8 20 118-137 33-52 (57)
39 d1s7ea1 a.4.1.1 (A:103-152) He 21.8 22 0.0016 19.5 1.8 28 113-140 22-49 (50)
40 d1zyba1 a.4.5.4 (A:148-220) Pr 21.6 31 0.0023 20.4 2.6 20 120-139 31-50 (73)
41 d1wh7a_ a.4.1.1 (A:) ZF-HD hom 21.6 42 0.0031 20.3 3.4 49 89-142 26-74 (80)
42 d2e1oa1 a.4.1.1 (A:8-64) Homeo 21.4 40 0.0029 18.9 3.0 29 113-141 24-52 (57)
43 d1x57a1 a.35.1.12 (A:8-85) End 21.3 29 0.0021 20.7 2.5 17 113-129 45-61 (78)
44 d1wi3a_ a.4.1.1 (A:) DNA-bindi 21.1 37 0.0027 19.9 2.9 32 113-144 32-63 (71)
45 d2a6ca1 a.35.1.13 (A:1-69) HTH 20.9 34 0.0024 19.8 2.7 14 94-107 10-23 (69)
46 d1x2na1 a.4.1.1 (A:6-67) Homeo 20.8 41 0.003 19.3 3.0 28 114-141 30-57 (62)
47 d1sfua_ a.4.5.19 (A:) 34L {Yab 20.7 69 0.0051 19.0 4.1 44 86-138 3-46 (70)
48 d1d1la_ a.35.1.2 (A:) cro lamb 20.5 41 0.003 19.5 2.8 24 120-143 17-41 (61)
49 d1k61a_ a.4.1.1 (A:) mat alpha 20.3 43 0.0031 19.0 3.0 29 113-141 25-53 (60)
50 d2fbqa1 a.4.1.9 (A:2-80) Trans 20.2 79 0.0058 18.3 5.6 47 118-186 26-72 (79)
No 1
>d1d0xa2 c.37.1.9 (A:2-33,A:80-759) Myosin S1, motor domain {Dictyostelium discoideum [TaxId: 44689]}
Probab=100.00 E-value=4.4e-59 Score=436.24 Aligned_cols=203 Identities=38% Similarity=0.587 Sum_probs=190.1
Q ss_pred ccHHHHHhhhhHHHHHhcCcccCCCCCCccccc------CCCC------------Cccch---------hHHHHHHhcCC
Q psy2473 5 GELEQQLLQANPILEAFGNAKTVKNDNSSRFVL------HQSK------------GKSSS---------WKTLTVSSSGA 57 (213)
Q Consensus 5 ~~i~~~i~~~~~iLeaFGnA~T~~N~nSSRfgk------~~~G------------EksRv---------fhiFYqll~g~ 57 (213)
..++++|+++||||||||||||++|+||||||| +..| ||||| |||||||++|+
T Consensus 162 ~~i~~~i~~~n~iLEAFGNAkT~~N~NSSRFGk~~~l~f~~~g~i~ga~i~~yLLEksRvv~~~~gErnfHIFYqll~g~ 241 (712)
T d1d0xa2 162 GVLEQQILQANPILEAFGNAKTTRNNNSSRFGKFIEIQFNNAGFISGASIQSYLLEKSRVVFQSETERNYHIFYQLLAGA 241 (712)
T ss_dssp CHHHHHHHHHHHHHHHHHEECCSSCTTEESSEEEEEEEECTTSCEEEEEEEEECCCGGGGTCCCTTCCSBHHHHHHHHHS
T ss_pred chHHHHHHhhhhHHHHhcCcCcCCCCCccceeEEEEEEEcCCCccccceeEEeccCCceEEeeccccccHHHHHHHHhCC
Confidence 458999999999999999999999999999999 4444 99999 99999999999
Q ss_pred CHHHHhhcccCCCcccccccCCCCC-CCCCchHHHHHHHHHHHHhcCCCcccee------------------------ee
Q psy2473 58 TPEQRKEFILEDPKTYLFLSNGNLP-VPGVDDAVEFQATVQAMNIMGMTNEDYS------------------------AS 112 (213)
Q Consensus 58 ~~~~~~~l~L~~~~~~~yl~~~~~~-~~~~~d~~~f~~l~~al~~lg~~~~e~~------------------------~~ 112 (213)
+++++++|+|.++..|+||+++++. .++++|+++|+.++.||+.|||+++|+. +.
T Consensus 242 ~~~~~~~~~l~~~~~~~yL~~~~~~~~~~~dd~~~f~~~~~al~~lgfs~~e~~~i~~iLaaILhLGNi~F~~~~~~~~~ 321 (712)
T d1d0xa2 242 TAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEFKITRQAMDIVGFSQEEQMSIFKIIAGILHLGNIKFEKGAGEGAV 321 (712)
T ss_dssp CHHHHHHHTCCCGGGCTTTSSSSCCCCTTCCHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHTCCCBCCSSSSCB
T ss_pred CHHHHHHhCCCCchhcccccCCCCcccCCcChHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhhccceEeecCCccee
Confidence 9999999999999999999998765 7899999999999999999999999988 45
Q ss_pred cCChHHHHHHHHHhCCCHHHHHhhhhcceEeeCceeEeecCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccCcc
Q psy2473 113 LPDNTVAQKIAKLLGLSITEMTKAFLKPRIKVGRDFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSLDRTKRQV 192 (213)
Q Consensus 113 ~~~~~~l~~aA~LLgv~~~~L~~~L~~~~~~~~~e~v~~~~~~~~A~~~rDalak~LY~~LF~wIV~~IN~~l~~~~~~~ 192 (213)
+.+++.++.+|+||||++++|.++|+++++.+++|.+++++++++|..+||||||+||++||+|||++||..|.+....
T Consensus 322 i~~~~~l~~~a~LLgv~~~~L~~~L~~~~~~~~~e~i~~~l~~~~A~~~rdalaK~LY~~LF~wiV~~IN~~l~~~~~~- 400 (712)
T d1d0xa2 322 LKDKTALNAASTVFGVNPSVLEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLCQERKA- 400 (712)
T ss_dssp CSCCHHHHHHHHHHTCCHHHHHHHHHSCEEEETTEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSCCS-
T ss_pred cCCHHHHHHHHHHhCCChhHhhhhhcceeeccCCceEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCccc-
Confidence 7788999999999999999999999999999999999999999999999999999999999999999999999876543
Q ss_pred eeeecceeeeeeccCCCccCC
Q psy2473 193 YFKLINRYGIILCFLFQSIVK 213 (213)
Q Consensus 193 ~~~~~d~~GilDifGFE~~~~ 213 (213)
.+||||||||||+|++
T Consensus 401 -----~~IgiLDifGFE~f~~ 416 (712)
T d1d0xa2 401 -----YFIGVLDISGFEIFKV 416 (712)
T ss_dssp -----EEEEEEECCCCCCCSS
T ss_pred -----ceeeeeeccccccccc
Confidence 3789999999999974
No 2
>d1br2a2 c.37.1.9 (A:80-789) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]}
Probab=100.00 E-value=7.3e-58 Score=428.67 Aligned_cols=205 Identities=52% Similarity=0.817 Sum_probs=177.5
Q ss_pred ccHHHHHhhhhHHHHHhcCcccCCCCCCccccc------CCCC------------Cccch---------hHHHHHHhcCC
Q psy2473 5 GELEQQLLQANPILEAFGNAKTVKNDNSSRFVL------HQSK------------GKSSS---------WKTLTVSSSGA 57 (213)
Q Consensus 5 ~~i~~~i~~~~~iLeaFGnA~T~~N~nSSRfgk------~~~G------------EksRv---------fhiFYqll~g~ 57 (213)
..|+++|+++||||||||||||.+|+||||||| +..| ||||| ||||||||+|+
T Consensus 139 ~~i~~~i~~~n~iLeaFGnakT~~N~NSSRfgk~~~l~f~~~g~i~ga~i~~ylLEksRv~~~~~~ErnfHIFY~ll~G~ 218 (710)
T d1br2a2 139 GELEKQLLQANPILEAFGNAKTVKNDNSSRFGKFIRINFDVTGYIVGANIETYLLEKSRAIRQAKDERTFHIFYYLIAGA 218 (710)
T ss_dssp CHHHHHHTTHHHHHHHHHEECCSSCTTEESSEEEEEEEECTTSCEEEEEEEEECCCGGGGTCCCTTCCCBHHHHHHHHHC
T ss_pred chHHHHHHHHHHHHHHhCCCccCCCCCCCCcceeeeeEEcCCCcEEEEEEEEecccCceeeEecCCCCcceeHHHHHcCC
Confidence 369999999999999999999999999999999 5555 99999 99999999999
Q ss_pred CHHHHhhcccCCCcccccccCCCCCCCCCchHHHHHHHHHHHHhcCCCcccee-------------------------ee
Q psy2473 58 TPEQRKEFILEDPKTYLFLSNGNLPVPGVDDAVEFQATVQAMNIMGMTNEDYS-------------------------AS 112 (213)
Q Consensus 58 ~~~~~~~l~L~~~~~~~yl~~~~~~~~~~~d~~~f~~l~~al~~lg~~~~e~~-------------------------~~ 112 (213)
++++++.|+|.++.+|+||+++..++++++|.++|++++.||..|||+++|+. +.
T Consensus 219 ~~~~~~~l~l~~~~~y~yL~~~~~~~~~~~d~~~f~~l~~Al~~lGf~~~e~~~i~~vlaaILhLGni~F~~~~~~~~~~ 298 (710)
T d1br2a2 219 SEQMRNDLLLEGFNNYTFLSNGHVPIPAQQDDEMFQETLEAMTIMGFTEEEQTSILRVVSSVLQLGNIVFKKERNTDQAS 298 (710)
T ss_dssp CHHHHTTTTCCCTTTCTTSTTSCCCCSSCCHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHCCCBCC----CCB
T ss_pred CHHHHHhhhcCChhhceeccCCCcccCCccHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhhcceeeeecccccccc
Confidence 99999999999999999999998889999999999999999999999999987 24
Q ss_pred cCChHHHHHHHHHhCCCHHHHHhhhhcceEeeCceeEeecCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccCcc
Q psy2473 113 LPDNTVAQKIAKLLGLSITEMTKAFLKPRIKVGRDFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSLDRTKRQV 192 (213)
Q Consensus 113 ~~~~~~l~~aA~LLgv~~~~L~~~L~~~~~~~~~e~v~~~~~~~~A~~~rDalak~LY~~LF~wIV~~IN~~l~~~~~~~ 192 (213)
+.+++.++.+|+||||++++|.++|+++++.++++.+++|+++++|..+||+|||+||++||+|||++||.+|.+.....
T Consensus 299 ~~~~~~~~~~a~LLgv~~~~L~~~L~~~~~~~~~e~i~~~l~~~~A~~~rdalak~LY~~LF~wiV~~iN~~l~~~~~~~ 378 (710)
T d1br2a2 299 MPDNTAAQKVCHLMGINVTDFTRSILTPRIKVGRDVVQKAQTKEQADFAIEALAKAKFERLFRWILTRVNKALDKTKRQG 378 (710)
T ss_dssp CSCCHHHHHHHHHHTCCHHHHHHHHHCC----------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC------
T ss_pred ccChHHHHHHHHHhcCCHHHHHhhheeeEEEecCcceecchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccc
Confidence 55678999999999999999999999999999999999999999999999999999999999999999999998755432
Q ss_pred eeeecceeeeeeccCCCccCC
Q psy2473 193 YFKLINRYGIILCFLFQSIVK 213 (213)
Q Consensus 193 ~~~~~d~~GilDifGFE~~~~ 213 (213)
..+||||||||||+|++
T Consensus 379 ----~~~IgiLDifGFE~f~~ 395 (710)
T d1br2a2 379 ----ASFLGILDIAGFEIFEI 395 (710)
T ss_dssp ----CEEEEEEECCCCCCCSS
T ss_pred ----cceeeEEeecCccccCc
Confidence 23789999999999974
No 3
>d2mysa2 c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]}
Probab=100.00 E-value=1.4e-57 Score=430.81 Aligned_cols=205 Identities=39% Similarity=0.596 Sum_probs=190.8
Q ss_pred cccHHHHHhhhhHHHHHhcCcccCCCCCCccccc------CCCC------------Cccch---------hHHHHHHhcC
Q psy2473 4 EGELEQQLLQANPILEAFGNAKTVKNDNSSRFVL------HQSK------------GKSSS---------WKTLTVSSSG 56 (213)
Q Consensus 4 ~~~i~~~i~~~~~iLeaFGnA~T~~N~nSSRfgk------~~~G------------EksRv---------fhiFYqll~g 56 (213)
...|+++|+++||||||||||||++|+||||||| +..| ||||| |||||||++|
T Consensus 166 ~~~i~~~i~~~npiLEAFGNAkT~~N~NSSRFgk~~~l~f~~~g~i~ga~i~~ylLEksRv~~~~~gErnfHIFYqll~g 245 (794)
T d2mysa2 166 QGTLEDQIISANPLLEAFGNAKTVRNDNSSRFGKFIRIHFGATGKLASADIETYLLEKSRVTFQLPAERSYHIFYQIMSN 245 (794)
T ss_dssp -CCHHHHHHHHHHHHHHHHEECCSSCSSEECSEEEEEEEECSSSSEEECCEEEECCCGGGGTCCCTTCCCBHHHHHHTTC
T ss_pred cCcHHHHHHHhhhHHHHhcCCcccccCChhhhheeeeeEECCCCCEeeEEEEEEecCCceEEecCcccccHHHHHHHHcC
Confidence 3579999999999999999999999999999999 4444 99999 9999999999
Q ss_pred CCHHHHhhcccC-CCcccccccCCCCCCCCCchHHHHHHHHHHHHhcCCCcccee-------------------------
Q psy2473 57 ATPEQRKEFILE-DPKTYLFLSNGNLPVPGVDDAVEFQATVQAMNIMGMTNEDYS------------------------- 110 (213)
Q Consensus 57 ~~~~~~~~l~L~-~~~~~~yl~~~~~~~~~~~d~~~f~~l~~al~~lg~~~~e~~------------------------- 110 (213)
+++++++.+.|. ++.+|+||++++...++++|.++|+.++.||+.|||+++|+.
T Consensus 246 ~~~~~~~~~~l~~~~~~y~yl~~~~~~~~~~~d~~~f~~~~~al~~lg~s~~e~~~i~~ilaaILhLGni~f~~~~~~~~ 325 (794)
T d2mysa2 246 KKPELIDMLLITTNPYDYHYVSEGEITVPSIDDQEELMATDSAIDILGFSADEKTAIYKLTGAVMHYGNLKFKQKQREEQ 325 (794)
T ss_dssp SSHHHHHHHTCCSCGGGCGGGCSSCCCCTTCCHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCCEEECTTSCC
T ss_pred CCHHHHHHhccCCCHHHhhhcCCCCcccCCCChHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccceeEeecCCccc
Confidence 999999999995 899999999988888999999999999999999999999987
Q ss_pred eecCChHHHHHHHHHhCCCHHHHHhhhhcceEeeCceeEeecCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccC
Q psy2473 111 ASLPDNTVAQKIAKLLGLSITEMTKAFLKPRIKVGRDFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSLDRTKR 190 (213)
Q Consensus 111 ~~~~~~~~l~~aA~LLgv~~~~L~~~L~~~~~~~~~e~v~~~~~~~~A~~~rDalak~LY~~LF~wIV~~IN~~l~~~~~ 190 (213)
+.+.+++.++.+|+||||++++|.++|+++++.+++|.+++|+++++|..+||+|||+||++||+|||++||..+.+...
T Consensus 326 ~~~~~~~~~~~~a~LLgi~~~~L~~~L~~~~~~~~~e~i~~~l~~~~a~~~rdalaK~LY~~LF~wiV~~IN~~l~~~~~ 405 (794)
T d2mysa2 326 AEPDGTEVADKAAYLMGLNSAELLKALCYPRVGVGNEAVTKGETVSEVHNSVGALAKAVYEKMFLWMVIRINQQLDTKQP 405 (794)
T ss_dssp EEESCSSHHHHHHHHHTCCHHHHHHHHHSCBCCCSSSCCBCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCSSC
T ss_pred ccccchHHHHHHHHHhCCCHHHhhccceeeEEEecccceeeeCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCC
Confidence 45678889999999999999999999999999999999999999999999999999999999999999999999987655
Q ss_pred cceeeecceeeeeeccCCCccCC
Q psy2473 191 QVYFKLINRYGIILCFLFQSIVK 213 (213)
Q Consensus 191 ~~~~~~~d~~GilDifGFE~~~~ 213 (213)
.. .+||||||||||+|++
T Consensus 406 ~~-----~~IgILDifGFE~f~~ 423 (794)
T d2mysa2 406 RQ-----YFIGVLDIAGFEIFDF 423 (794)
T ss_dssp CC-----EEEEEEEEECCCCCSS
T ss_pred cc-----eEEEEeeccccccccc
Confidence 42 3799999999999974
No 4
>d1kk8a2 c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain {Bay scallop (Aequipecten irradians) [TaxId: 31199]}
Probab=100.00 E-value=2e-57 Score=429.48 Aligned_cols=204 Identities=39% Similarity=0.607 Sum_probs=184.9
Q ss_pred ccHHHHHhhhhHHHHHhcCcccCCCCCCccccc------CCCC------------Cccch---------hHHHHHHhcCC
Q psy2473 5 GELEQQLLQANPILEAFGNAKTVKNDNSSRFVL------HQSK------------GKSSS---------WKTLTVSSSGA 57 (213)
Q Consensus 5 ~~i~~~i~~~~~iLeaFGnA~T~~N~nSSRfgk------~~~G------------EksRv---------fhiFYqll~g~ 57 (213)
++|+++|+++||||||||||||++|+||||||| +..| ||||| ||||||||+|+
T Consensus 165 ~~i~~~il~~npiLEAFGNAkT~~N~NSSRFGk~~~l~f~~~g~i~ga~i~~yLLEksRvv~~~~gErnfHIFY~ll~G~ 244 (789)
T d1kk8a2 165 GSLEDQIIQANPVLEAYGNAKTTRNNNSSRFGKFIRIHFGPTGKIAGADIETYLLEKSRVTYQQSAERNYHIFYQICSNA 244 (789)
T ss_dssp CCHHHHHHHHHHHHHHHHEECCSSCTTEESSEEEEEEEECTTSSEEEEEEEEECCCGGGGTCCCTTCCSBHHHHHHTSCS
T ss_pred ccHHHHHHHHhHHHHhccccCCCCCCccCCcceeEEEEECCCCCCccceeEEecCCCceeeecccccchhHHHHHHHcCC
Confidence 469999999999999999999999999999999 4554 99999 99999999999
Q ss_pred CHHHHhhcccC-CCcccccccCCCCCCCCCchHHHHHHHHHHHHhcCCCcccee-------------------------e
Q psy2473 58 TPEQRKEFILE-DPKTYLFLSNGNLPVPGVDDAVEFQATVQAMNIMGMTNEDYS-------------------------A 111 (213)
Q Consensus 58 ~~~~~~~l~L~-~~~~~~yl~~~~~~~~~~~d~~~f~~l~~al~~lg~~~~e~~-------------------------~ 111 (213)
++++++.+.|. ++..|.|+++++..+++++|+++|+.++.||+.|||+++|+. +
T Consensus 245 ~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~d~~~f~~~~~al~~lg~~~~e~~~i~~ilaaILhLGni~F~~~~~~~~~ 324 (789)
T d1kk8a2 245 IPELNDVMLVTPDSGLYSFINQGCLTVDNIDDVEEFKLCDEAFDILGFTKEEKQSMFKCTASILHMGEMKFKQRPREEQA 324 (789)
T ss_dssp SGGGHHHHTCCSCGGGCTTTCSSCSCBTTBCHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCCEEC----CCC
T ss_pred CHHHHHHhCCCCchhhhHhhcCCCcccCCcchHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHhccccceeeccCCcccc
Confidence 99999999996 567899999987778999999999999999999999999987 4
Q ss_pred ecCChHHHHHHHHHhCCCHHHHHhhhhcceEeeCceeEeecCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccCc
Q psy2473 112 SLPDNTVAQKIAKLLGLSITEMTKAFLKPRIKVGRDFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSLDRTKRQ 191 (213)
Q Consensus 112 ~~~~~~~l~~aA~LLgv~~~~L~~~L~~~~~~~~~e~v~~~~~~~~A~~~rDalak~LY~~LF~wIV~~IN~~l~~~~~~ 191 (213)
.+.+++.++.+|+||||++++|.++|+++.+.+++|.+++|+++++|.++||+|||+||++||+|||++||..|.+....
T Consensus 325 ~~~~~~~~~~~a~LLgi~~~~L~~~l~~~~~~~~~e~i~~~l~~~~a~~~rdalaK~lY~~LF~wIV~~IN~~L~~~~~~ 404 (789)
T d1kk8a2 325 ESDGTAEAEKVAFLCGINAGDLLKALLKPKVKVGTEMVTKGQNMNQVVNSVGALAKSLYDRMFNWLVRRVNKTLDTKAKR 404 (789)
T ss_dssp EESCSHHHHHHHHHHTSCHHHHHHHHHSCEEC----CEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_pred ccCChHHHHHHHHHhCCCHHHhhcceeEEEEecccCceecCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCc
Confidence 56788899999999999999999999999999999999999999999999999999999999999999999999875543
Q ss_pred ceeeecceeeeeeccCCCccCC
Q psy2473 192 VYFKLINRYGIILCFLFQSIVK 213 (213)
Q Consensus 192 ~~~~~~d~~GilDifGFE~~~~ 213 (213)
. .+||||||||||+|++
T Consensus 405 ~-----~~IgILDIfGFE~f~~ 421 (789)
T d1kk8a2 405 N-----YYIGVLDIAGFEIFDF 421 (789)
T ss_dssp C-----EEEEEEECCCCCCCSS
T ss_pred c-----eEEEEeecccceecCc
Confidence 2 2689999999999974
No 5
>d1w7ja2 c.37.1.9 (A:63-792) Myosin S1, motor domain {Chicken (Gallus gallus), Va isoform [TaxId: 9031]}
Probab=100.00 E-value=1.2e-56 Score=421.65 Aligned_cols=205 Identities=27% Similarity=0.449 Sum_probs=190.2
Q ss_pred cccHHHHHhhhhHHHHHhcCcccCCCCCCccccc------CCCC------------Cccch---------hHHHHHHhcC
Q psy2473 4 EGELEQQLLQANPILEAFGNAKTVKNDNSSRFVL------HQSK------------GKSSS---------WKTLTVSSSG 56 (213)
Q Consensus 4 ~~~i~~~i~~~~~iLeaFGnA~T~~N~nSSRfgk------~~~G------------EksRv---------fhiFYqll~g 56 (213)
...++++|+++||||||||||||.+|+||||||| +..| ||||| |||||||++|
T Consensus 127 ~~~~~~~i~~~n~ileaFGnAkT~~N~NSSRfgk~~~l~f~~~g~i~ga~i~~ylLEksRv~~~~~~ErnfHIFY~ll~g 206 (730)
T d1w7ja2 127 EANVEEKVLASNPIMESIGNAKTTRNDNSSRFGKYIEIGFDKRYRIIGANMRTYLLEKSRVVFQAEEERNYHIFYQLCAS 206 (730)
T ss_dssp SSCHHHHHHHHHHHHHHHHEECCSSCTTEECSEEEEEEEECTTSCEEEEEEEEECCCGGGGTCCCTTCCSBHHHHHHHHT
T ss_pred cccHHHHHHHHHHHHHHhcccccCCCCCcccceeeeeeeecCCCCEEEEEEEEccccccceeeecCCCCcchhHHHHHcC
Confidence 4579999999999999999999999999999999 4455 99999 9999999999
Q ss_pred CCHHHHhhcccCCCcccccccCCCCC-CCCCchHHHHHHHHHHHHhcCCCcccee-------------------------
Q psy2473 57 ATPEQRKEFILEDPKTYLFLSNGNLP-VPGVDDAVEFQATVQAMNIMGMTNEDYS------------------------- 110 (213)
Q Consensus 57 ~~~~~~~~l~L~~~~~~~yl~~~~~~-~~~~~d~~~f~~l~~al~~lg~~~~e~~------------------------- 110 (213)
++++++++|.+.+++.|+||+++++. .++++|.++|.+++.||+.|||+++|+.
T Consensus 207 ~~~~~~~~l~l~~~~~~~yl~~~~~~~~~~~~d~~~f~~~~~al~~lG~~~ee~~~i~~iLaaILhLGni~f~~~~~~~~ 286 (730)
T d1w7ja2 207 AALPEFKTLRLGNANYFHYTKQGGSPVIDGIDDAKEMVNTRQACTLLGISDSYQMGIFRILAGILHLGNVEFASRDSDSC 286 (730)
T ss_dssp TTSGGGGGGCCCCTTTSHHHHTTSCCCCTTCCHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHTCCCEEEETTEE
T ss_pred CCHHHHHHhCCCChhhhhhhccCCCceeCCcchHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHheeceeEEEecCCcce
Confidence 99999999999999999999998875 7899999999999999999999999887
Q ss_pred eecCChHHHHHHHHHhCCCHHHHHhhhhcceEeeCceeEeecCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccC
Q psy2473 111 ASLPDNTVAQKIAKLLGLSITEMTKAFLKPRIKVGRDFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSLDRTKR 190 (213)
Q Consensus 111 ~~~~~~~~l~~aA~LLgv~~~~L~~~L~~~~~~~~~e~v~~~~~~~~A~~~rDalak~LY~~LF~wIV~~IN~~l~~~~~ 190 (213)
+.+.+.+.++.+|+||||++++|.++|+++++.+++|.+.+|+++.+|..+||+|||+||++||+|||.+||..|.+...
T Consensus 287 ~~~~~~~~l~~~a~LLgv~~~~L~~~l~~~~~~~~~e~i~~~~~~~~a~~~rdalak~lY~~LF~wiv~~iN~~l~~~~~ 366 (730)
T d1w7ja2 287 AIPPKHDPLTIFCDLMGVDYEEMAHWLCHRKLATATETYIKPISKLHAINARDALAKHIYANLFNWIVDHVNKALHSTVK 366 (730)
T ss_dssp ECCTTCHHHHHHHHHHTCCHHHHHHHHSEEEEECSSCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSSC
T ss_pred eecCCHHHHHHHHHhhCCCHHHHHHhhheeeEeeccceeecchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCccc
Confidence 34567889999999999999999999999999999999999999999999999999999999999999999999987554
Q ss_pred cceeeecceeeeeeccCCCccCC
Q psy2473 191 QVYFKLINRYGIILCFLFQSIVK 213 (213)
Q Consensus 191 ~~~~~~~d~~GilDifGFE~~~~ 213 (213)
.. .+||||||||||+|++
T Consensus 367 ~~-----~~IgiLDifGFE~f~~ 384 (730)
T d1w7ja2 367 QH-----SFIGVLDIYGFETFEI 384 (730)
T ss_dssp CS-----EEEEEEECCCCCCCSS
T ss_pred cc-----cccceeeccCCcccCc
Confidence 32 3689999999999974
No 6
>d1lkxa_ c.37.1.9 (A:) Myosin S1, motor domain {Dictyostelium discoideum, class-I myosin MyoE [TaxId: 44689]}
Probab=100.00 E-value=9.1e-56 Score=412.80 Aligned_cols=204 Identities=29% Similarity=0.459 Sum_probs=182.0
Q ss_pred ccHHHHHhhhhHHHHHhcCcccCCCCCCccccc------CCCC------------Cccch---------hHHHHHHhcCC
Q psy2473 5 GELEQQLLQANPILEAFGNAKTVKNDNSSRFVL------HQSK------------GKSSS---------WKTLTVSSSGA 57 (213)
Q Consensus 5 ~~i~~~i~~~~~iLeaFGnA~T~~N~nSSRfgk------~~~G------------EksRv---------fhiFYqll~g~ 57 (213)
..|+++|+++||||||||||||.+|+||||||| +..| ||||| |||||||++|+
T Consensus 122 ~~i~~~i~~~n~iLeaFGNAkT~~N~NSSRfgk~~~l~f~~~g~i~ga~i~~ylLEksRv~~~~~gErnfHIFYqll~g~ 201 (684)
T d1lkxa_ 122 ERISKMLLDSNPLLEAFGNAKTLRNDNSSRFGKYMEMQFNAVGSPIGGKITNYLLEKSRVVGRTQGERSFHIFYQMLKGL 201 (684)
T ss_dssp HHHHHHHHHHHHHHHHHHBBCCSSCSSCBCSEEEEEEEECTTCCEEEEEEEEECCCGGGGTCCCTTCCCBHHHHHHHTTS
T ss_pred chHHHHHHhhhhhhhhcccccccCCCCcCceeeEEEEEecCCCcEeeEEEEEeeecccccccccccccchhhHHHHHhCC
Confidence 458999999999999999999999999999999 4445 99999 99999999999
Q ss_pred CHHHHhhccc-CCCcccccccCCCCC-CCCCchHHHHHHHHHHHHhcCCCcccee-------------------------
Q psy2473 58 TPEQRKEFIL-EDPKTYLFLSNGNLP-VPGVDDAVEFQATVQAMNIMGMTNEDYS------------------------- 110 (213)
Q Consensus 58 ~~~~~~~l~L-~~~~~~~yl~~~~~~-~~~~~d~~~f~~l~~al~~lg~~~~e~~------------------------- 110 (213)
+++++++|++ .++..|+||+++++. .++++|.++|..++.||++|||+++|+.
T Consensus 202 ~~~~~~~l~~~~~~~~y~~l~~~~~~~~~~~dd~~~f~~l~~al~~lg~~~~e~~~i~~ilaaILhLGni~F~~~~~~~~ 281 (684)
T d1lkxa_ 202 SQSKLDELGLTPNAPAYEYLKKSGCFDVSTIDDSGEFKIIVKAMETLGLKESDQNSIWRILAAILHIGNITFAEAAEQRT 281 (684)
T ss_dssp CHHHHHHHTCCSCGGGSHHHHHTTCCCCTTCCHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCCEEEETTC--
T ss_pred CHHHHHhhccCCccchhhhhcCCCCccCCCcChHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhhcceeEeecccccc
Confidence 9999999886 488999999988765 7899999999999999999999999987
Q ss_pred ----eecCChHHHHHHHHHhCCCHHHHHhhhhcceEeeC----ceeEeecCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy2473 111 ----ASLPDNTVAQKIAKLLGLSITEMTKAFLKPRIKVG----RDFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRIN 182 (213)
Q Consensus 111 ----~~~~~~~~l~~aA~LLgv~~~~L~~~L~~~~~~~~----~e~v~~~~~~~~A~~~rDalak~LY~~LF~wIV~~IN 182 (213)
+.+.+++.++.||+||||++++|.++|+.+.+.++ ++.+++|+++++|..+||||||+||++||+|||++||
T Consensus 282 ~~~~~~~~~~~~l~~aa~LLgv~~~~L~~~l~~~~i~~~~~~~~~~i~~~~~~~~A~~~rdalak~LY~~LF~wiv~~IN 361 (684)
T d1lkxa_ 282 GTTTVKVSDTKSLAAAASCLKTDQQSLSIALCYRSISTGVGKRCSVISVPMDCNQAAYSRDALAKALYERLFNWLVSKIN 361 (684)
T ss_dssp --CEEEESSHHHHHHHHHHHTSCHHHHHHHHHBCC----------CCCCBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcceeecCCHHHHHHHHhhcCCCHHHHHhhhheeeeeecccccceEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 34678899999999999999999999999998876 5889999999999999999999999999999999999
Q ss_pred hhcccccCcceeeecceeeeeeccCCCccCC
Q psy2473 183 RSLDRTKRQVYFKLINRYGIILCFLFQSIVK 213 (213)
Q Consensus 183 ~~l~~~~~~~~~~~~d~~GilDifGFE~~~~ 213 (213)
+.|.+..... .+||||||||||+|++
T Consensus 362 ~~L~~~~~~~-----~~IgiLDifGFE~f~~ 387 (684)
T d1lkxa_ 362 TIINCTTEKG-----PVIGILDIYGFEVFQN 387 (684)
T ss_dssp HHHCCCSCCC-----CEEEEEECCCCCCCSS
T ss_pred hhcCCCCccc-----ceEEEeeccCCcCCCC
Confidence 9998765432 3689999999999874
No 7
>d2r1jl1 a.35.1.2 (L:3-68) P22 C2 repressor, DNA-binding domain {Salmonella bacteriophage P22 [TaxId: 10754]}
Probab=82.08 E-value=0.61 Score=27.97 Aligned_cols=42 Identities=12% Similarity=0.083 Sum_probs=28.7
Q ss_pred HHHHHHHhcCCCcccee----------------eecCChHHHHHHHHHhCCCHHHHHh
Q psy2473 94 ATVQAMNIMGMTNEDYS----------------ASLPDNTVAQKIAKLLGLSITEMTK 135 (213)
Q Consensus 94 ~l~~al~~lg~~~~e~~----------------~~~~~~~~l~~aA~LLgv~~~~L~~ 135 (213)
.++..++..|++..+.. ..-++.+.+..+|+.|||+.+.|..
T Consensus 7 rik~~R~~~g~tq~~lA~~~gvs~~~i~~~e~g~~~p~~~~l~~ia~~l~v~~~~Ll~ 64 (66)
T d2r1jl1 7 RIRARRKKLKIRQAALGKMVGVSNVAISQWERSETEPNGENLLALSKALQCSPDYLLK 64 (66)
T ss_dssp HHHHHHHHHTCCHHHHHHHHTSCHHHHHHHHTTSSCCBHHHHHHHHHHTTSCHHHHHH
T ss_pred HHHHHHHHcCCCHHHHHHHHCCCHHHHHHHHcCCCCCCHHHHHHHHHHhCCCHHHHhc
Confidence 35555666666665554 2335778888999999999887753
No 8
>d2croa_ a.35.1.2 (A:) cro 434 {Bacteriophage 434 [TaxId: 10712]}
Probab=80.02 E-value=0.48 Score=28.45 Aligned_cols=41 Identities=12% Similarity=0.015 Sum_probs=27.0
Q ss_pred HHHHHHHhcCCCcccee----------------eecCChHHHHHHHHHhCCCHHHHHh
Q psy2473 94 ATVQAMNIMGMTNEDYS----------------ASLPDNTVAQKIAKLLGLSITEMTK 135 (213)
Q Consensus 94 ~l~~al~~lg~~~~e~~----------------~~~~~~~~l~~aA~LLgv~~~~L~~ 135 (213)
.++.+++..|+++++.. -.. ..+.+..+|+.|||+++.|..
T Consensus 7 rlr~~R~~~gltq~~lA~~~gvs~~ti~~~E~g~~~-~~~~l~~ia~~l~v~~~~Ll~ 63 (65)
T d2croa_ 7 RLKKRRIALKMTQTELATKAGVKQQSIQLIEAGVTK-RPRFLFEIAMALNCDPVWLQY 63 (65)
T ss_dssp HHHHHHHHTTCCHHHHHHHHTSCHHHHHHHHTTCCS-SCTTHHHHHHHTTSCHHHHHH
T ss_pred HHHHHHHHcCCCHHHHHHHHCcCHhHHHHHHCCCCC-CHHHHHHHHHHhCCCHHHHhh
Confidence 45666677777766554 122 235678888888888888753
No 9
>d1r69a_ a.35.1.2 (A:) 434 C1 repressor, DNA-binding domain {Bacteriophage 434 [TaxId: 10712]}
Probab=79.00 E-value=0.54 Score=27.95 Aligned_cols=42 Identities=12% Similarity=0.203 Sum_probs=26.1
Q ss_pred HHHHHHHhcCCCcccee---------------eecCChHHHHHHHHHhCCCHHHHHh
Q psy2473 94 ATVQAMNIMGMTNEDYS---------------ASLPDNTVAQKIAKLLGLSITEMTK 135 (213)
Q Consensus 94 ~l~~al~~lg~~~~e~~---------------~~~~~~~~l~~aA~LLgv~~~~L~~ 135 (213)
.++...+..|++++|.. ..-++.+.+..+|+.|||+++.|..
T Consensus 5 rik~~R~~~g~sq~elA~~~gvs~~~is~~E~g~~~~~~~l~~ia~~l~v~~~~l~~ 61 (63)
T d1r69a_ 5 RVKSKRIQLGLNQAELAQKVGTTQQSIEQLENGKTKRPRFLPELASALGVSVDWLLN 61 (63)
T ss_dssp HHHHHHHHTTCCHHHHHHHHTSCHHHHHHHHTTSCSSCTTHHHHHHHTTCCHHHHHH
T ss_pred HHHHHHHHcCCcHHHHHHHhCcCHHHHHHHHCCCCcCHHHHHHHHHHHCcCHHHHhh
Confidence 34555556666655543 1123455678888888888887753
No 10
>d2b5aa1 a.35.1.3 (A:1-77) Regulatory protein C.BclI {Bacillus caldolyticus [TaxId: 1394]}
Probab=75.37 E-value=1.4 Score=26.98 Aligned_cols=41 Identities=12% Similarity=0.133 Sum_probs=29.1
Q ss_pred HHHHHHhcCCCcccee----------------eecCChHHHHHHHHHhCCCHHHHHh
Q psy2473 95 TVQAMNIMGMTNEDYS----------------ASLPDNTVAQKIAKLLGLSITEMTK 135 (213)
Q Consensus 95 l~~al~~lg~~~~e~~----------------~~~~~~~~l~~aA~LLgv~~~~L~~ 135 (213)
++......|++.++.. ...++.+.+..+|..|||++++|..
T Consensus 15 ik~~R~~~gltq~~lA~~~gis~~~i~~~e~g~~~p~~~~l~~ia~~l~v~~~~l~~ 71 (77)
T d2b5aa1 15 LKKIRTQKGVSQEELADLAGLHRTYISEVERGDRNISLINIHKICAALDIPASTFFR 71 (77)
T ss_dssp HHHHHHHTTCCHHHHHHHHTCCHHHHHHHHTTCSCCBHHHHHHHHHHTTCCHHHHHH
T ss_pred HHHHHHHcCCCHHHHHHHHCCCHHHHHHHHcCCCCCCHHHHHHHHHHhCCCHHHHhc
Confidence 4555555677666554 2346678899999999999988865
No 11
>d1b0na2 a.35.1.3 (A:1-68) SinR repressor, DNA-binding domain {Bacillus subtilis [TaxId: 1423]}
Probab=74.95 E-value=1.7 Score=26.05 Aligned_cols=23 Identities=17% Similarity=0.356 Sum_probs=18.9
Q ss_pred cCChHHHHHHHHHhCCCHHHHHh
Q psy2473 113 LPDNTVAQKIAKLLGLSITEMTK 135 (213)
Q Consensus 113 ~~~~~~l~~aA~LLgv~~~~L~~ 135 (213)
.++.+.+..+|+.|||++++|..
T Consensus 41 ~ps~~~l~~ia~~l~v~~~~l~~ 63 (68)
T d1b0na2 41 NPSIQFLEKVSAVLDVSVHTLLD 63 (68)
T ss_dssp CCCHHHHHHHHHHHTCCHHHHHC
T ss_pred CCCHHHHHHHHHHHCCcHHHHcC
Confidence 35678899999999999988854
No 12
>d1y7ya1 a.35.1.3 (A:5-73) Restriction-modification controller protein C.AhdI {Aeromonas hydrophila [TaxId: 644]}
Probab=72.48 E-value=0.76 Score=27.83 Aligned_cols=40 Identities=15% Similarity=0.129 Sum_probs=25.8
Q ss_pred HHHHHHHhcCCCcccee----------------eecCChHHHHHHHHHhCCCHHHH
Q psy2473 94 ATVQAMNIMGMTNEDYS----------------ASLPDNTVAQKIAKLLGLSITEM 133 (213)
Q Consensus 94 ~l~~al~~lg~~~~e~~----------------~~~~~~~~l~~aA~LLgv~~~~L 133 (213)
.++......|+++++.. -..++.+.+..+|+.|||++++|
T Consensus 13 ~ik~~R~~~gltq~~lA~~~gis~~~i~~~E~g~~~p~~~~l~~ia~~l~v~~~~l 68 (69)
T d1y7ya1 13 RLRELRTAKGLSQETLAFLSGLDRSYVGGVERGQRNVSLVNILKLATALDIEPREL 68 (69)
T ss_dssp HHHHHHHHTTCCHHHHHHHHTCCHHHHHHHHTTCSCCBHHHHHHHHHHTTSCGGGG
T ss_pred HHHHHHHHcCCCHHHHHhHhCCCHHHHHHHHCCCCCCCHHHHHHHHHHhCcCHHHH
Confidence 36666677788876554 12345667777777777776654
No 13
>d1u3em2 d.285.1.1 (M:106-174) Intron-encoded homing endonuclease I-HmuI {Bacteriophage SP01 [TaxId: 10685]}
Probab=71.53 E-value=2.9 Score=25.09 Aligned_cols=33 Identities=18% Similarity=0.130 Sum_probs=26.8
Q ss_pred HHHHHHHHhCCCHHHHHhhhhcceEeeCceeEe
Q psy2473 118 VAQKIAKLLGLSITEMTKAFLKPRIKVGRDFVT 150 (213)
Q Consensus 118 ~l~~aA~LLgv~~~~L~~~L~~~~~~~~~e~v~ 150 (213)
++..||+|||++.....++|.-++..-+|=++.
T Consensus 32 s~~kAaelLGL~r~~Vs~CL~GrrKhh~GfsFe 64 (69)
T d1u3em2 32 STKCACEELGLTRGKVTDVLKGHRIHHKGYTFR 64 (69)
T ss_dssp CHHHHHHHHTCCHHHHHHHHHTSSSCBTTBEEE
T ss_pred hHHHHHHHhCcchhHHHHHhccceeccCCeEEE
Confidence 568999999999999999999877665554443
No 14
>d2icta1 a.35.1.3 (A:8-94) Antitoxin HigA {Escherichia coli [TaxId: 562]}
Probab=70.09 E-value=2.3 Score=26.94 Aligned_cols=41 Identities=10% Similarity=0.201 Sum_probs=28.8
Q ss_pred HHHHHHhcCCCcccee----------------eecCChHHHHHHHHHhCCCHHHHHh
Q psy2473 95 TVQAMNIMGMTNEDYS----------------ASLPDNTVAQKIAKLLGLSITEMTK 135 (213)
Q Consensus 95 l~~al~~lg~~~~e~~----------------~~~~~~~~l~~aA~LLgv~~~~L~~ 135 (213)
+...++..|+++.+.. -...+++.+.++|+.|||+++-+..
T Consensus 6 lke~r~~~glsq~~LA~~lGvs~~~is~ie~g~~~~s~~~~~kla~~lgvs~~~~L~ 62 (87)
T d2icta1 6 IQESLDELNVSLREFARAMEIAPSTASRLLTGKAALTPEMAIKLSVVIGSSPQMWLN 62 (87)
T ss_dssp HHHHHHHHTCCHHHHHHHHTCCHHHHHHHHHTSSCCCHHHHHHHHHHTCSCHHHHHH
T ss_pred HHHHHHHcCCCHHHHHHHHhhcHHHHHHHHHhccCCCHHHHHHHHHHHCcCHHHHHh
Confidence 4455666666665554 2345788889999999999987765
No 15
>d1y9qa1 a.35.1.8 (A:4-82) Probable transcriptional regulator VC1968, N-terminal domain {Vibrio cholerae [TaxId: 666]}
Probab=69.58 E-value=0.96 Score=28.04 Aligned_cols=42 Identities=19% Similarity=0.122 Sum_probs=30.7
Q ss_pred HHHHHHHHhcCCCcccee----------------eecCChHHHHHHHHHhCCCHHHHH
Q psy2473 93 QATVQAMNIMGMTNEDYS----------------ASLPDNTVAQKIAKLLGLSITEMT 134 (213)
Q Consensus 93 ~~l~~al~~lg~~~~e~~----------------~~~~~~~~l~~aA~LLgv~~~~L~ 134 (213)
..++......|++.++.. -..++.+.+..+|+.|||+.++|.
T Consensus 11 ~~lr~~R~~~g~sq~~lA~~~gis~~~i~~~E~g~~~p~~~~l~~ia~~l~v~~~~l~ 68 (79)
T d1y9qa1 11 NQLKNLRKSRGLSLDATAQLTGVSKAMLGQIERGESSPTIATLWKIASGLEASFSAFF 68 (79)
T ss_dssp HHHHHHHHHTTCCHHHHHHHHSSCHHHHHHHHTTCSCCCHHHHHHHHHHHTCCSGGGG
T ss_pred HHHHHHHHHcCCCHHHHHHHHCcchhHHHHHHcCCCCCCHHHHHHHHHHHCCCHHHHh
Confidence 446667777788877665 234577889999999999877764
No 16
>d1utxa_ a.35.1.3 (A:) Putative transcription regulator CylR2 {Enterococcus faecalis [TaxId: 1351]}
Probab=66.55 E-value=2.6 Score=25.00 Aligned_cols=23 Identities=26% Similarity=0.284 Sum_probs=18.7
Q ss_pred ecCChHHHHHHHHHhCCCHHHHH
Q psy2473 112 SLPDNTVAQKIAKLLGLSITEMT 134 (213)
Q Consensus 112 ~~~~~~~l~~aA~LLgv~~~~L~ 134 (213)
..++.+.+..+|+.|||+.++|.
T Consensus 39 ~~p~~~~l~~ia~~l~v~~~~lf 61 (66)
T d1utxa_ 39 YNPSLQLALKIAYYLNTPLEDIF 61 (66)
T ss_dssp CCCCHHHHHHHHHHTTSCHHHHE
T ss_pred CCCCHHHHHHHHHHHCCCHHHHc
Confidence 34677889999999999998874
No 17
>d2fi0a1 a.248.1.1 (A:3-81) Hypothetical protein SPr0485/SP0561 {Streptococcus pneumoniae [TaxId: 1313]}
Probab=57.52 E-value=3.1 Score=26.11 Aligned_cols=46 Identities=11% Similarity=0.217 Sum_probs=37.7
Q ss_pred HHHHHHHHHHHHhcCCCccceeeecCChH---------HHHHHHHHhCCCHHHHHhhhhcc
Q psy2473 89 AVEFQATVQAMNIMGMTNEDYSASLPDNT---------VAQKIAKLLGLSITEMTKAFLKP 140 (213)
Q Consensus 89 ~~~f~~l~~al~~lg~~~~e~~~~~~~~~---------~l~~aA~LLgv~~~~L~~~L~~~ 140 (213)
.++|-++.+-|..+||++ +.+|. .+..+|.+-|++.+.+.+.|-..
T Consensus 17 i~~yPe~~~il~~~GF~~------l~nP~ml~t~gr~~TL~~aa~~~gidl~~~~~~L~~a 71 (79)
T d2fi0a1 17 VDKHPEVLEILVELGFKP------LANPLMRNTVGRKVSLKQGSKLAGTPMDKIVRTLEAN 71 (79)
T ss_dssp HHHCGGGHHHHTTTTCGG------GGSHHHHTTHHHHCBHHHHHHHHTCCHHHHHHHHHHT
T ss_pred HHHChHHHHHHHHcCchh------hCCHHHHHHHhhHccHHHHHHHcCCCHHHHHHHHHHC
Confidence 567888889999999986 66664 46899999999999999988654
No 18
>d1lmb3_ a.35.1.2 (3:) lambda C1 repressor, DNA-binding domain {Bacteriophage lambda [TaxId: 10710]}
Probab=55.64 E-value=3.1 Score=26.20 Aligned_cols=48 Identities=25% Similarity=0.348 Sum_probs=32.6
Q ss_pred hHHHHHHH-HHHHHhcCCCcccee----------------eecCChHHHHHHHHHhCCCHHHHHh
Q psy2473 88 DAVEFQAT-VQAMNIMGMTNEDYS----------------ASLPDNTVAQKIAKLLGLSITEMTK 135 (213)
Q Consensus 88 d~~~f~~l-~~al~~lg~~~~e~~----------------~~~~~~~~l~~aA~LLgv~~~~L~~ 135 (213)
|++.+..+ ..+.+..|+++.+.. -...+.+.+..+|+.|||++++|..
T Consensus 9 ~~~~l~~~i~~~R~~~gltq~~lA~~lgis~~~is~~E~g~~~~s~~~l~~ia~~l~v~~~~~~~ 73 (87)
T d1lmb3_ 9 DARRLKAIYEKKKNELGLSQESVADKMGMGQSGVGALFNGINALNAYNAALLAKILKVSVEEFSP 73 (87)
T ss_dssp HHHHHHHHHHHHHHHHTCCHHHHHHHHTSCHHHHHHHHTTSSCCCHHHHHHHHHHHTSCGGGTCH
T ss_pred HHHHHHHHHHHHHHHcCCCHHHHHHHhCccHHHHHHHHhccCCCcHHHHHHHHHHHCCCHHHHCh
Confidence 44555443 344566788877665 2345678899999999999887753
No 19
>d1umqa_ a.4.1.12 (A:) Photosynthetic apparatus regulatory protein PprA (RegA), DNA-binding domain {Rhodobacter sphaeroides [TaxId: 1063]}
Probab=51.72 E-value=18 Score=20.78 Aligned_cols=39 Identities=10% Similarity=0.202 Sum_probs=31.4
Q ss_pred HHHHHHHHHHHHhcCCCccceeeecCChHHHHHHHHHhCCCHHHHHhhhhcc
Q psy2473 89 AVEFQATVQAMNIMGMTNEDYSASLPDNTVAQKIAKLLGLSITEMTKAFLKP 140 (213)
Q Consensus 89 ~~~f~~l~~al~~lg~~~~e~~~~~~~~~~l~~aA~LLgv~~~~L~~~L~~~ 140 (213)
..+-+.+..+|+..|-. ...+|+.|||+...|..-|-+.
T Consensus 19 ~~Er~~I~~aL~~~~gn-------------~~~aA~~LGIsR~TL~rkmkky 57 (60)
T d1umqa_ 19 RVRWEHIQRIYEMCDRN-------------VSETARRLNMHRRTLQRILAKR 57 (60)
T ss_dssp HHHHHHHHHHHHHTTSC-------------HHHHHHHHTSCHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHhcCc-------------HHHHHHHHCCCHHHHHHHHHHc
Confidence 44567789999988776 5799999999999998776554
No 20
>d2ou3a1 a.287.1.1 (A:1-160) Tellurite resistance protein of COG3793 {Nostoc punctiforme pcc 73102 [TaxId: 63737]}
Probab=32.92 E-value=20 Score=24.56 Aligned_cols=21 Identities=19% Similarity=0.265 Sum_probs=17.9
Q ss_pred HHHHHHHHHhCCCHHHHHhhh
Q psy2473 117 TVAQKIAKLLGLSITEMTKAF 137 (213)
Q Consensus 117 ~~l~~aA~LLgv~~~~L~~~L 137 (213)
+.+..+|..||++.+.+....
T Consensus 116 ~~l~~ia~~Lgi~~~~~~~l~ 136 (160)
T d2ou3a1 116 AKIRKMATILGIKEEIVDQLE 136 (160)
T ss_dssp HHHHHHHHHHTCCHHHHHHHH
T ss_pred HHHHHHHHHcCCCHHHHHHHH
Confidence 468999999999998887755
No 21
>d1ufma_ a.4.5.47 (A:) COP9 signalosome complex subunit 4, GSN4 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=32.41 E-value=15 Score=22.79 Aligned_cols=22 Identities=14% Similarity=0.208 Sum_probs=17.9
Q ss_pred HHHHHHHHhCCCHHHHHhhhhc
Q psy2473 118 VAQKIAKLLGLSITEMTKAFLK 139 (213)
Q Consensus 118 ~l~~aA~LLgv~~~~L~~~L~~ 139 (213)
.++.+|++|++++++++..+..
T Consensus 32 sl~~la~~l~l~~~evE~~l~~ 53 (84)
T d1ufma_ 32 TFEELGALLEIPAAKAEKIASQ 53 (84)
T ss_dssp EHHHHHHHTTSCHHHHHHHHHH
T ss_pred eHHHHHHHHCCCHHHHHHHHHH
Confidence 3779999999999888776653
No 22
>d1u0ma2 c.95.1.2 (A:202-349) Putative polyketide synthase SCO1206 {Streptomyces coelicolor [TaxId: 1902]}
Probab=28.80 E-value=21 Score=24.31 Aligned_cols=45 Identities=9% Similarity=0.084 Sum_probs=36.4
Q ss_pred HHHHHHHHHhcCCCcccee---eecCChHHHHHHHHHhCCCHHHHHhh
Q psy2473 92 FQATVQAMNIMGMTNEDYS---ASLPDNTVAQKIAKLLGLSITEMTKA 136 (213)
Q Consensus 92 f~~l~~al~~lg~~~~e~~---~~~~~~~~l~~aA~LLgv~~~~L~~~ 136 (213)
...+.++|+..|++.++++ .-..+...++.+++-||++++++...
T Consensus 46 ~~~i~~~l~~~g~~~~did~~~~Hq~~~~i~~~i~~~Lgl~~~k~~~s 93 (148)
T d1u0ma2 46 APALKELAGEHGWDASDLDFYIVHAGGPRILDDLSTFLEVDPHAFRFS 93 (148)
T ss_dssp HHHHHHHHHTTSCCSSCCSCCEEECSHHHHHHHHHHHSCSCGGGGHHH
T ss_pred HHHHHHHHHHhCCCHHHCCEEEECCCCHHHHHHHHHHhCCChhhhhHH
Confidence 3446778889999999998 34567778999999999999998653
No 23
>d2ofya1 a.35.1.3 (A:3-84) Putative transcriptional regulator RHA1_ro04071 {Rhodococcus sp. RHA1 [TaxId: 101510]}
Probab=27.75 E-value=20 Score=22.01 Aligned_cols=27 Identities=19% Similarity=0.279 Sum_probs=22.2
Q ss_pred cCChHHHHHHHHHhCCCHHHHHhhhhc
Q psy2473 113 LPDNTVAQKIAKLLGLSITEMTKAFLK 139 (213)
Q Consensus 113 ~~~~~~l~~aA~LLgv~~~~L~~~L~~ 139 (213)
..+.+.+..+|+-|||+.++|......
T Consensus 52 ~ps~~tl~kia~~L~v~~~~Ll~~~~~ 78 (82)
T d2ofya1 52 TPAFFTIAAVARVLDLSLDDVAAVVTF 78 (82)
T ss_dssp SCBHHHHHHHHHHTTCCHHHHHTTCCC
T ss_pred CCCHHHHHHHHHHHCCCHHHHHhhcCC
Confidence 356788999999999999999865443
No 24
>d1dwka1 a.35.1.4 (A:1-86) Cyanase N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=27.47 E-value=32 Score=21.46 Aligned_cols=23 Identities=13% Similarity=0.056 Sum_probs=18.7
Q ss_pred CChHHHHHHHHHhCCCHHHHHhh
Q psy2473 114 PDNTVAQKIAKLLGLSITEMTKA 136 (213)
Q Consensus 114 ~~~~~l~~aA~LLgv~~~~L~~~ 136 (213)
-+++.++.++++||++.+.....
T Consensus 53 l~~~~A~~l~~~L~L~~e~~~~L 75 (86)
T d1dwka1 53 LPADAARLVGAKLDLDEDSILLL 75 (86)
T ss_dssp CCHHHHHHHHHHHTCCHHHHHHH
T ss_pred CCHHHHHHHHHHcCCCHHHHHHH
Confidence 46788999999999998876643
No 25
>d1au7a1 a.4.1.1 (A:103-160) Pit-1 POU homeodomain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=27.07 E-value=26 Score=19.86 Aligned_cols=29 Identities=21% Similarity=0.230 Sum_probs=25.0
Q ss_pred cCChHHHHHHHHHhCCCHHHHHhhhhcce
Q psy2473 113 LPDNTVAQKIAKLLGLSITEMTKAFLKPR 141 (213)
Q Consensus 113 ~~~~~~l~~aA~LLgv~~~~L~~~L~~~~ 141 (213)
.++.+....+|.-||+++.....++.++.
T Consensus 23 ~P~~~~~~~La~~l~l~~~~V~~WFqNrR 51 (58)
T d1au7a1 23 KPSSQEIMRMAEELNLEKEVVRVWFCNRR 51 (58)
T ss_dssp SCCHHHHHHHHHHHTCCHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHhCCCHHHHHHHHHHHh
Confidence 46778899999999999999998887654
No 26
>d1zk8a1 a.4.1.9 (A:6-77) Transcriptional regulator BC5000 {Bacillus cereus [TaxId: 1396]}
Probab=25.35 E-value=58 Score=18.62 Aligned_cols=45 Identities=16% Similarity=0.180 Sum_probs=34.4
Q ss_pred HHHHHHHHhCCCHHHHHhhhhcceEeeCceeEeecCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q psy2473 118 VAQKIAKLLGLSITEMTKAFLKPRIKVGRDFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRS 184 (213)
Q Consensus 118 ~l~~aA~LLgv~~~~L~~~L~~~~~~~~~e~v~~~~~~~~A~~~rDalak~LY~~LF~wIV~~IN~~ 184 (213)
.+..+|+-+||+...+-+.+-. ++.|...+..+.+.++..++-++
T Consensus 25 t~~~Ia~~agvs~~slY~yF~~----------------------k~~L~~~~~~~~~~~~~~~l~~a 69 (72)
T d1zk8a1 25 TLASLAQTLGVRSPSLYNHVKG----------------------LQDVRKNLGIYGIKKLHNRLEEA 69 (72)
T ss_dssp CHHHHHHHHTSCHHHHTTTCSS----------------------HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHhCCCHHHHHHHCcC----------------------HHHHHHHHHHHHHHHHHHHHHHH
Confidence 4678999999998887776644 36788888888888888777654
No 27
>d1u6ea2 c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (FabH) {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=25.19 E-value=32 Score=23.33 Aligned_cols=40 Identities=15% Similarity=0.223 Sum_probs=32.8
Q ss_pred HHHHHHHhcCCCccceeee---cCChHHHHHHHHHhCCCHHHH
Q psy2473 94 ATVQAMNIMGMTNEDYSAS---LPDNTVAQKIAKLLGLSITEM 133 (213)
Q Consensus 94 ~l~~al~~lg~~~~e~~~~---~~~~~~l~~aA~LLgv~~~~L 133 (213)
.+.++|+..|++.++++.. -.+...++.+++-||+++++.
T Consensus 53 ~i~~~L~~~gl~~~dId~~i~Hqa~~~i~~~v~~~lgl~~ek~ 95 (148)
T d1u6ea2 53 VGRRAMDAAGVRPDQIDVFVPHQANSRINELLVKNLQLRPDAV 95 (148)
T ss_dssp HHHHHHHHHTCCGGGCCEEEECCSCHHHHHHHHHHHTCCTTCE
T ss_pred HHHHHHHHcCCCcccccEEEeccccHHHHHHHHHhcCCCchhh
Confidence 3578899999999999843 367788999999999997653
No 28
>d1sfxa_ a.4.5.50 (A:) Hypothetical protein AF2008 {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=24.93 E-value=12 Score=24.16 Aligned_cols=46 Identities=17% Similarity=0.176 Sum_probs=33.3
Q ss_pred HHHHHHHHHhcCCCccceee----ecCChHHHHHHHHHhCCCHHHHHhhh
Q psy2473 92 FQATVQAMNIMGMTNEDYSA----SLPDNTVAQKIAKLLGLSITEMTKAF 137 (213)
Q Consensus 92 f~~l~~al~~lg~~~~e~~~----~~~~~~~l~~aA~LLgv~~~~L~~~L 137 (213)
..++...|..+|+++.|..+ .-.++..+..+|+.+|++......+|
T Consensus 6 ~~~l~~~L~~lGlt~~e~~v~~~L~~~g~~t~~eia~~~~i~~~~v~~~l 55 (109)
T d1sfxa_ 6 LGELVKALEKLSFKPSDVRIYSLLLERGGMRVSEIARELDLSARFVRDRL 55 (109)
T ss_dssp HHHHHHHHHHTCCCHHHHHHHHHHHHHCCBCHHHHHHHHTCCHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHhcCCCCHHHHHHHhCCCcchHHHHH
Confidence 45778889999999988872 11234457789999999986655544
No 29
>d1e3oc1 a.4.1.1 (C:104-160) Oct-1 POU Homeodomain {Human (Homo sapiens) [TaxId: 9606]}
Probab=24.34 E-value=32 Score=19.41 Aligned_cols=29 Identities=21% Similarity=0.189 Sum_probs=25.1
Q ss_pred cCChHHHHHHHHHhCCCHHHHHhhhhcce
Q psy2473 113 LPDNTVAQKIAKLLGLSITEMTKAFLKPR 141 (213)
Q Consensus 113 ~~~~~~l~~aA~LLgv~~~~L~~~L~~~~ 141 (213)
.++.+..+.+|.-||+++.....++.++.
T Consensus 22 ~P~~~~~~~LA~~lgL~~~qV~~WFqNrR 50 (57)
T d1e3oc1 22 KPTSEDITLIAEQLNMEKEVIRVWFSNRR 50 (57)
T ss_dssp SCCHHHHHHHHHHHTCCHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHCCCHHHHHHHHHHHH
Confidence 46778899999999999999999887764
No 30
>d2auwa1 a.35.1.10 (A:88-154) Hypothetical protein NE0471 C-terminal domain {Nitrosomonas europaea [TaxId: 915]}
Probab=24.24 E-value=54 Score=19.21 Aligned_cols=32 Identities=16% Similarity=0.013 Sum_probs=24.1
Q ss_pred HHHHHHhcCCCccceeeecCChHHHHHHHHHhCCCHHHHHhhhhc
Q psy2473 95 TVQAMNIMGMTNEDYSASLPDNTVAQKIAKLLGLSITEMTKAFLK 139 (213)
Q Consensus 95 l~~al~~lg~~~~e~~~~~~~~~~l~~aA~LLgv~~~~L~~~L~~ 139 (213)
+..-.+..|+++ ..+|+.|||+...+.++=.-
T Consensus 6 ~k~~R~~~gltQ-------------~elA~~LGvs~~ti~~yE~G 37 (67)
T d2auwa1 6 FGDWMHRNNLSL-------------TTAAEALGISRRMVSYYRTA 37 (67)
T ss_dssp HHHHHHHTTCCH-------------HHHHHHHTSCHHHHHHHHTT
T ss_pred HHHHHHHcCCCH-------------HHHHHHhCCCHHHHHHHHcC
Confidence 444556677775 67999999999988887654
No 31
>d1hnja2 c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (FabH) {Escherichia coli [TaxId: 562]}
Probab=24.18 E-value=37 Score=22.77 Aligned_cols=41 Identities=12% Similarity=0.199 Sum_probs=33.0
Q ss_pred HHHHHHHhcCCCccceeeec---CChHHHHHHHHHhCCCHHHHH
Q psy2473 94 ATVQAMNIMGMTNEDYSASL---PDNTVAQKIAKLLGLSITEMT 134 (213)
Q Consensus 94 ~l~~al~~lg~~~~e~~~~~---~~~~~l~~aA~LLgv~~~~L~ 134 (213)
-+..+|+..|++.++++..+ .+...++.+++.||+++++..
T Consensus 49 ~i~~~L~~~g~~~~dId~~i~Hq~~~~~~~~~~~~l~l~~~k~~ 92 (143)
T d1hnja2 49 IVDETLAANNLDRSQLDWLVPHQANLRIISATAKKLGMSMDNVV 92 (143)
T ss_dssp HHHHHHHHTTCCGGGCCEEEECCSCHHHHHHHHHHTTCCGGGBC
T ss_pred HHHHHHHHhhhcccccceEEeccCchHHHHHHHHhCccchhhhh
Confidence 35677889999999998433 577889999999999987554
No 32
>d2ppxa1 a.35.1.3 (A:30-91) Uncharacterized protein Atu1735 {Agrobacterium tumefaciens [TaxId: 358]}
Probab=23.53 E-value=54 Score=18.47 Aligned_cols=33 Identities=3% Similarity=-0.015 Sum_probs=23.2
Q ss_pred HHHHHHhcCCCccceeeecCChHHHHHHHHHhCCCHHHHHhhhhcc
Q psy2473 95 TVQAMNIMGMTNEDYSASLPDNTVAQKIAKLLGLSITEMTKAFLKP 140 (213)
Q Consensus 95 l~~al~~lg~~~~e~~~~~~~~~~l~~aA~LLgv~~~~L~~~L~~~ 140 (213)
++..-..+|+++ +.+|+++||+...+.++=.-+
T Consensus 4 ik~~R~~~gltQ-------------~elA~~lGvs~~tvs~~E~G~ 36 (62)
T d2ppxa1 4 IKIIRRALKLTQ-------------EEFSARYHIPLGTLRDWEQGR 36 (62)
T ss_dssp HHHHHHHTTCCH-------------HHHHHHHTCCHHHHHHHHTTS
T ss_pred HHHHHHHcCCCH-------------HHHHHHhCCCHHHHHHHHCCC
Confidence 445556677775 568888999988887766543
No 33
>d2oi8a1 a.4.1.9 (A:8-86) Putative regulatory protein Sco4313 {Streptomyces coelicolor [TaxId: 1902]}
Probab=23.44 E-value=67 Score=18.67 Aligned_cols=46 Identities=15% Similarity=0.207 Sum_probs=35.3
Q ss_pred HHHHHHHHhCCCHHHHHhhhhcceEeeCceeEeecCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhc
Q psy2473 118 VAQKIAKLLGLSITEMTKAFLKPRIKVGRDFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSL 185 (213)
Q Consensus 118 ~l~~aA~LLgv~~~~L~~~L~~~~~~~~~e~v~~~~~~~~A~~~rDalak~LY~~LF~wIV~~IN~~l 185 (213)
.+..+|+-.||+...|-+.+-.+ +.|...++.+.+..+...+-..+
T Consensus 31 t~~~Ia~~agvs~~~~Y~~F~~k----------------------~~L~~~~~~~~~~~~~~~~~~a~ 76 (79)
T d2oi8a1 31 SLNAIAKRMGMSGPALYRYFDGR----------------------DELITELIRDAYRSQADSLRAAA 76 (79)
T ss_dssp CHHHHHHHTTCCHHHHHTTCSSH----------------------HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHhCCCCCchhhhcCCH----------------------HHHHHHHHHHHHHHHHHHHHHHH
Confidence 37789999999999888877554 56777888877777777765554
No 34
>d2cqxa1 a.4.1.1 (A:8-66) LAG1 longevity assurance homolog 5, LASS5 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=23.37 E-value=34 Score=19.47 Aligned_cols=29 Identities=24% Similarity=0.358 Sum_probs=24.6
Q ss_pred cCChHHHHHHHHHhCCCHHHHHhhhhcce
Q psy2473 113 LPDNTVAQKIAKLLGLSITEMTKAFLKPR 141 (213)
Q Consensus 113 ~~~~~~l~~aA~LLgv~~~~L~~~L~~~~ 141 (213)
.++.+..+.+|..||+++.....++-+++
T Consensus 26 yPs~~~~~~LA~~lgls~~qV~~WFqNrR 54 (59)
T d2cqxa1 26 YPDEKRLKGLSKQLDWSVRKIQCWFRHRR 54 (59)
T ss_dssp SCCHHHHHHHHHHTTCCHHHHHHHHHHHH
T ss_pred CcCHHHHHHHHHHHCcCHHHHHHHHHhhh
Confidence 45778889999999999999999887654
No 35
>d1le8a_ a.4.1.1 (A:) Mating type protein A1 Homeodomain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=23.31 E-value=34 Score=18.91 Aligned_cols=29 Identities=17% Similarity=0.277 Sum_probs=24.6
Q ss_pred cCChHHHHHHHHHhCCCHHHHHhhhhcce
Q psy2473 113 LPDNTVAQKIAKLLGLSITEMTKAFLKPR 141 (213)
Q Consensus 113 ~~~~~~l~~aA~LLgv~~~~L~~~L~~~~ 141 (213)
.++.+....+|.-+|+++.....++-+++
T Consensus 21 ~P~~~~~~~LA~~lgl~~~qV~~WFqNrR 49 (53)
T d1le8a_ 21 SLNSKEKEEVAKKCGITPLQVRVWFINKR 49 (53)
T ss_dssp CCCHHHHHHHHHHTTSCHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHCCCHHHHHHHHHhhh
Confidence 46778899999999999999998887654
No 36
>d1kska3 d.66.1.5 (A:1-59) Pseudouridine synthase RsuA N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=23.27 E-value=52 Score=18.38 Aligned_cols=33 Identities=24% Similarity=0.303 Sum_probs=28.6
Q ss_pred HHHHHhCCCHHHHHhhhhcceEeeCceeEeecC
Q psy2473 121 KIAKLLGLSITEMTKAFLKPRIKVGRDFVTKSQ 153 (213)
Q Consensus 121 ~aA~LLgv~~~~L~~~L~~~~~~~~~e~v~~~~ 153 (213)
.+|+...++..+-.+.+....+.+.|+.+.+|.
T Consensus 6 ~l~~~~~~SR~~a~~lI~~g~V~Vng~~v~~~~ 38 (59)
T d1kska3 6 FIAQQLGVSRAIAGREIRGNRVTVDGEIVRNAA 38 (59)
T ss_dssp HHHHHHTCCHHHHHHHHHTTCEEETTEECCCTT
T ss_pred HHHHcCCCCHHHHHHHHHcCcEEECCEEeecCC
Confidence 467778889999999999999999999988775
No 37
>d1lvaa3 a.4.5.35 (A:511-574) C-terminal fragment of elongation factor SelB {Moorella thermoacetica [TaxId: 1525]}
Probab=23.01 E-value=44 Score=19.21 Aligned_cols=41 Identities=7% Similarity=0.079 Sum_probs=32.0
Q ss_pred hHHHHHHHHHHHHhcCCCccceeeecCChHHHHHHHHHhCCCHHHHHhhhh
Q psy2473 88 DAVEFQATVQAMNIMGMTNEDYSASLPDNTVAQKIAKLLGLSITEMTKAFL 138 (213)
Q Consensus 88 d~~~f~~l~~al~~lg~~~~e~~~~~~~~~~l~~aA~LLgv~~~~L~~~L~ 138 (213)
+.+-|+++..++..=||. |..+..+|+-+|++..++...|-
T Consensus 5 q~~l~~~I~~~~~~~g~~----------PP~vrdl~~~l~~~e~~~~~lL~ 45 (64)
T d1lvaa3 5 QKKLLKDLEDKYRVSRWQ----------PPSFKEVAGSFNLDPSELEELLH 45 (64)
T ss_dssp HHHHHHHHHHHHHHHTTS----------CCBHHHHHHHTTCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCC----------CCcHHHHHHHhCCCHHHHHHHHH
Confidence 345688888888888877 45678899999999988877654
No 38
>d1l0oc_ a.4.13.2 (C:) SigmaF {Bacillus stearothermophilus [TaxId: 1422]}
Probab=22.15 E-value=35 Score=19.22 Aligned_cols=20 Identities=30% Similarity=0.355 Sum_probs=17.3
Q ss_pred HHHHHHHHhCCCHHHHHhhh
Q psy2473 118 VAQKIAKLLGLSITEMTKAF 137 (213)
Q Consensus 118 ~l~~aA~LLgv~~~~L~~~L 137 (213)
..+.+|+-||++.+++..+|
T Consensus 33 T~~EiA~~l~~~~e~V~~~l 52 (57)
T d1l0oc_ 33 TVTEIADHLGISPEDVVLAQ 52 (57)
T ss_dssp BHHHHHHHHTSCHHHHHHHH
T ss_pred CHHHHHHHHCcCHHHHHHHH
Confidence 46789999999999998876
No 39
>d1s7ea1 a.4.1.1 (A:103-152) Hepatocyte nuclear factor 6 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=21.82 E-value=22 Score=19.47 Aligned_cols=28 Identities=21% Similarity=0.511 Sum_probs=22.8
Q ss_pred cCChHHHHHHHHHhCCCHHHHHhhhhcc
Q psy2473 113 LPDNTVAQKIAKLLGLSITEMTKAFLKP 140 (213)
Q Consensus 113 ~~~~~~l~~aA~LLgv~~~~L~~~L~~~ 140 (213)
-.+.+..+.+|..||++......++.++
T Consensus 22 ~P~~~~~~~LA~~l~l~~~~V~~WFqNr 49 (50)
T d1s7ea1 22 RPSKELQITISQQLGLELSTVSNFFMNA 49 (50)
T ss_dssp SSTHHHHHHHHTTSCSSSHHHHHHHHHC
T ss_pred CCCHHHHHHHHHHHCcCHHHhhhcCCcC
Confidence 4567788999999999999888877654
No 40
>d1zyba1 a.4.5.4 (A:148-220) Probable transcription regulator BT4300, C-terminal domain {Bacteroides thetaiotaomicron [TaxId: 818]}
Probab=21.59 E-value=31 Score=20.41 Aligned_cols=20 Identities=15% Similarity=0.245 Sum_probs=17.1
Q ss_pred HHHHHHhCCCHHHHHhhhhc
Q psy2473 120 QKIAKLLGLSITEMTKAFLK 139 (213)
Q Consensus 120 ~~aA~LLgv~~~~L~~~L~~ 139 (213)
+.+|+++|++.+.+.++|-.
T Consensus 31 ~elA~~lg~sr~tvsr~l~~ 50 (73)
T d1zyba1 31 DDLARCLDDTRLNISKTLNE 50 (73)
T ss_dssp HHHHHHHTSCHHHHHHHHHH
T ss_pred HHHHHHHCCCHHHHHHHHHH
Confidence 57899999999999888764
No 41
>d1wh7a_ a.4.1.1 (A:) ZF-HD homeobox protein At4g24660 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=21.58 E-value=42 Score=20.26 Aligned_cols=49 Identities=8% Similarity=0.050 Sum_probs=35.7
Q ss_pred HHHHHHHHHHHHhcCCCccceeeecCChHHHHHHHHHhCCCHHHHHhhhhcceE
Q psy2473 89 AVEFQATVQAMNIMGMTNEDYSASLPDNTVAQKIAKLLGLSITEMTKAFLKPRI 142 (213)
Q Consensus 89 ~~~f~~l~~al~~lg~~~~e~~~~~~~~~~l~~aA~LLgv~~~~L~~~L~~~~~ 142 (213)
...-+.|...++.++... .-++.+..+.+|+-|||++..+..++-+++.
T Consensus 26 ~~Q~~~L~~~fe~~~~~~-----~~p~~~~~~~la~~~gl~~~~i~vWFqN~R~ 74 (80)
T d1wh7a_ 26 AEQKEKMLAFAERLGWRI-----QKHDDVAVEQFCAETGVRRQVLKIWMHNNKN 74 (80)
T ss_dssp HHHHHHHHHHHHHHTSCC-----CSSTTHHHHHHHHHSCCCHHHHHHHHHTTSC
T ss_pred HHHHHHHHHHHHHhcccc-----cCcCHHHHHHHHHHHCCCHHHeeeecccCcC
Confidence 344555666667665431 2456788999999999999999999987653
No 42
>d2e1oa1 a.4.1.1 (A:8-64) Homeobox protein prh {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.40 E-value=40 Score=18.93 Aligned_cols=29 Identities=24% Similarity=0.306 Sum_probs=24.2
Q ss_pred cCChHHHHHHHHHhCCCHHHHHhhhhcce
Q psy2473 113 LPDNTVAQKIAKLLGLSITEMTKAFLKPR 141 (213)
Q Consensus 113 ~~~~~~l~~aA~LLgv~~~~L~~~L~~~~ 141 (213)
.++.+....+|..||+++.....++-++.
T Consensus 24 yp~~~~r~~LA~~l~L~~~qV~~WFqNrR 52 (57)
T d2e1oa1 24 YLSPPERKRLAKMLQLSERQVKTWFQNRR 52 (57)
T ss_dssp SCCHHHHHHHHHHTTCCHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHhCCCHHHhhHhhhhhh
Confidence 45677889999999999999988887654
No 43
>d1x57a1 a.35.1.12 (A:8-85) Endothelial differentiation-related factor 1, EDF1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.33 E-value=29 Score=20.70 Aligned_cols=17 Identities=41% Similarity=0.780 Sum_probs=14.1
Q ss_pred cCChHHHHHHHHHhCCC
Q psy2473 113 LPDNTVAQKIAKLLGLS 129 (213)
Q Consensus 113 ~~~~~~l~~aA~LLgv~ 129 (213)
.++.+.+..+|..|||+
T Consensus 45 ~p~~~~l~~la~~l~v~ 61 (78)
T d1x57a1 45 IPNNQVLGKIERAIGLK 61 (78)
T ss_dssp CCCHHHHHHHHHHHTBC
T ss_pred CCCHHHHHHHHHHhCCc
Confidence 46778889999999987
No 44
>d1wi3a_ a.4.1.1 (A:) DNA-binding protein SATB2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.09 E-value=37 Score=19.94 Aligned_cols=32 Identities=25% Similarity=0.399 Sum_probs=26.4
Q ss_pred cCChHHHHHHHHHhCCCHHHHHhhhhcceEee
Q psy2473 113 LPDNTVAQKIAKLLGLSITEMTKAFLKPRIKV 144 (213)
Q Consensus 113 ~~~~~~l~~aA~LLgv~~~~L~~~L~~~~~~~ 144 (213)
.++.+..+.+|..||++...+..++-+++...
T Consensus 32 ~P~~~~~~~La~~lgl~~~qV~~WFqNrR~k~ 63 (71)
T d1wi3a_ 32 YPDQEAIHTLSAQLDLPKHTIIKFFQNQRYHV 63 (71)
T ss_dssp CCCHHHHHHHHHHSCCCHHHHHHHHHHHHHHC
T ss_pred CCCHHHHHHHHHHhCCCHHHHHHHhHhhHhhh
Confidence 35678889999999999999999998776443
No 45
>d2a6ca1 a.35.1.13 (A:1-69) HTH-motif protein NE1354 {Nitrosomonas europaea [TaxId: 915]}
Probab=20.90 E-value=34 Score=19.80 Aligned_cols=14 Identities=14% Similarity=0.140 Sum_probs=8.3
Q ss_pred HHHHHHHhcCCCcc
Q psy2473 94 ATVQAMNIMGMTNE 107 (213)
Q Consensus 94 ~l~~al~~lg~~~~ 107 (213)
.++...+.-|++++
T Consensus 10 ~i~~~r~~~gltq~ 23 (69)
T d2a6ca1 10 VLQEHLRNSGLTQF 23 (69)
T ss_dssp HHHHHHHTTTCCHH
T ss_pred HHHHHHHHcCCCHH
Confidence 45555566677753
No 46
>d1x2na1 a.4.1.1 (A:6-67) Homeobox protein pknox1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.81 E-value=41 Score=19.29 Aligned_cols=28 Identities=21% Similarity=0.433 Sum_probs=24.1
Q ss_pred CChHHHHHHHHHhCCCHHHHHhhhhcce
Q psy2473 114 PDNTVAQKIAKLLGLSITEMTKAFLKPR 141 (213)
Q Consensus 114 ~~~~~l~~aA~LLgv~~~~L~~~L~~~~ 141 (213)
++.+....+|..+|++...+..++.+++
T Consensus 30 Ps~~e~~~La~~~~l~~~qI~~WF~N~R 57 (62)
T d1x2na1 30 PTEDEKKQIAAQTNLTLLQVNNWFINAR 57 (62)
T ss_dssp CCHHHHHHHHHHHTCCHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHCcCHHHhHHHHHHHH
Confidence 5677889999999999999999988753
No 47
>d1sfua_ a.4.5.19 (A:) 34L {Yaba-like disease virus, YLDV [TaxId: 132475]}
Probab=20.74 E-value=69 Score=19.04 Aligned_cols=44 Identities=16% Similarity=0.246 Sum_probs=35.2
Q ss_pred CchHHHHHHHHHHHHhcCCCccceeeecCChHHHHHHHHHhCCCHHHHHhhhh
Q psy2473 86 VDDAVEFQATVQAMNIMGMTNEDYSASLPDNTVAQKIAKLLGLSITEMTKAFL 138 (213)
Q Consensus 86 ~~d~~~f~~l~~al~~lg~~~~e~~~~~~~~~~l~~aA~LLgv~~~~L~~~L~ 138 (213)
.+|.+-|+.++..++.||-++ ...+..+|.=||++..+..+.|.
T Consensus 3 ~~~~~i~~lvk~~l~~L~~~~---------~~tA~~LAk~Lg~~Kk~VNr~LY 46 (70)
T d1sfua_ 3 VNDAEIFSLVKKEVLSLNTND---------YTTAISLSNRLKINKKKINQQLY 46 (70)
T ss_dssp CCSHHHHHHHHHHHHTSCTTC---------EECHHHHHHHTTCCHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHhcCCCC---------CchHHHHHHHhCCCHHHHHHHHH
Confidence 478888999999999998654 22467889999999988888775
No 48
>d1d1la_ a.35.1.2 (A:) cro lambda repressor {Bacteriophage lambda [TaxId: 10710]}
Probab=20.46 E-value=41 Score=19.51 Aligned_cols=24 Identities=33% Similarity=0.336 Sum_probs=19.7
Q ss_pred HHHHHHhCCCHHHHHhhhhc-ceEe
Q psy2473 120 QKIAKLLGLSITEMTKAFLK-PRIK 143 (213)
Q Consensus 120 ~~aA~LLgv~~~~L~~~L~~-~~~~ 143 (213)
..+|+.|||......+++.. |.|.
T Consensus 17 aKaA~~LGv~Q~AIsKAira~R~I~ 41 (61)
T d1d1la_ 17 TKTAKDLGVYQSAINKAIHAGRKIF 41 (61)
T ss_dssp HHHHHHHTCCTHHHHHHHHTTCCEE
T ss_pred HHHHHHcCccHHHHHHHHhcCCeEE
Confidence 57999999999999999984 4443
No 49
>d1k61a_ a.4.1.1 (A:) mat alpha2 Homeodomain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=20.27 E-value=43 Score=18.96 Aligned_cols=29 Identities=17% Similarity=0.114 Sum_probs=24.9
Q ss_pred cCChHHHHHHHHHhCCCHHHHHhhhhcce
Q psy2473 113 LPDNTVAQKIAKLLGLSITEMTKAFLKPR 141 (213)
Q Consensus 113 ~~~~~~l~~aA~LLgv~~~~L~~~L~~~~ 141 (213)
.++.+....+|.-+|+++..+..++.+++
T Consensus 25 yPs~~e~~~La~~~gL~~~qV~~WF~N~R 53 (60)
T d1k61a_ 25 YLDTKGLENLMKNTSLSRIQIKNWVSNRR 53 (60)
T ss_dssp CCCHHHHHHHHHHHCCCHHHHHHHHHHHH
T ss_pred CcCHHHHHHHHHHHCcCHHHHhHHhHhhc
Confidence 36778889999999999999999988764
No 50
>d2fbqa1 a.4.1.9 (A:2-80) Transcriptional regulator PsrA {Pseudomonas aeruginosa [TaxId: 287]}
Probab=20.21 E-value=79 Score=18.27 Aligned_cols=47 Identities=17% Similarity=0.324 Sum_probs=34.3
Q ss_pred HHHHHHHHhCCCHHHHHhhhhcceEeeCceeEeecCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcc
Q psy2473 118 VAQKIAKLLGLSITEMTKAFLKPRIKVGRDFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSLD 186 (213)
Q Consensus 118 ~l~~aA~LLgv~~~~L~~~L~~~~~~~~~e~v~~~~~~~~A~~~rDalak~LY~~LF~wIV~~IN~~l~ 186 (213)
.+..+|+-.||+...+-+.+-.+ +.|...++.+.+..++..+...+.
T Consensus 26 ti~~Ia~~agvs~~s~y~~F~~K----------------------~~l~~~~~~~~~~~~~~~~~~~~~ 72 (79)
T d2fbqa1 26 SLRLITSKAGVNLAAVNYHFGSK----------------------KALIQAVFSRFLGPFCASLEKELD 72 (79)
T ss_dssp CHHHHHHHHTSCHHHHHHHTCSH----------------------HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHCcChhHHHHHCcCH----------------------HHHHHHHHHHHHHHHHHHHHHHHh
Confidence 46789999999999998887654 456666666666666666665553
Done!