Query psy2480
Match_columns 337
No_of_seqs 139 out of 157
Neff 5.1
Searched_HMMs 29240
Date Fri Aug 16 17:21:20 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy2480.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/2480hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3k40_A Aromatic-L-amino-acid d 99.2 7.1E-11 2.4E-15 117.3 12.3 123 166-325 348-472 (475)
2 4e1o_A HDC, histidine decarbox 99.2 1.2E-10 4.1E-15 115.5 13.0 122 166-324 355-478 (481)
3 3vp6_A Glutamate decarboxylase 99.1 3.6E-10 1.2E-14 113.4 14.3 137 166-326 364-507 (511)
4 2qma_A Diaminobutyrate-pyruvat 99.1 9.5E-10 3.2E-14 108.9 15.5 126 166-324 369-496 (497)
5 2jis_A Cysteine sulfinic acid 99.1 7E-10 2.4E-14 110.6 14.0 131 167-323 377-514 (515)
6 2okj_A Glutamate decarboxylase 99.0 2.4E-09 8.1E-14 106.2 13.7 135 166-324 361-502 (504)
7 1js3_A DDC;, DOPA decarboxylas 99.0 7.8E-09 2.7E-13 101.7 14.7 125 166-327 351-477 (486)
8 2dgk_A GAD-beta, GADB, glutama 98.5 1.1E-06 3.7E-11 85.6 14.3 132 167-326 302-436 (452)
9 3hbx_A GAD 1, glutamate decarb 98.3 5.4E-06 1.9E-10 82.7 13.8 126 173-331 324-451 (502)
10 3mc6_A Sphingosine-1-phosphate 97.3 0.0018 6E-08 63.4 11.6 110 175-326 329-439 (497)
11 3mad_A Sphingosine-1-phosphate 96.8 0.0073 2.5E-07 59.6 11.1 111 174-326 360-471 (514)
12 3vp6_A Glutamate decarboxylase 95.7 0.0068 2.3E-07 60.5 4.4 68 29-117 365-432 (511)
13 1wyu_A Glycine dehydrogenase ( 95.6 0.071 2.4E-06 51.2 10.9 100 181-320 334-436 (438)
14 2fyf_A PSAT, phosphoserine ami 95.3 0.12 4.2E-06 48.5 11.3 99 189-323 296-397 (398)
15 3k40_A Aromatic-L-amino-acid d 95.3 0.018 6.1E-07 56.8 5.5 48 31-78 351-398 (475)
16 4e1o_A HDC, histidine decarbox 94.9 0.02 7E-07 56.3 4.8 49 30-78 357-405 (481)
17 3ffr_A Phosphoserine aminotran 94.9 0.21 7.1E-06 45.3 11.2 104 180-320 255-360 (362)
18 3f9t_A TDC, L-tyrosine decarbo 94.7 0.16 5.6E-06 46.4 10.0 105 173-321 291-395 (397)
19 2okj_A Glutamate decarboxylase 94.5 0.03 1E-06 55.1 4.9 50 30-79 363-412 (504)
20 3nnk_A Ureidoglycine-glyoxylat 94.4 0.27 9.2E-06 45.6 10.9 111 179-325 278-391 (411)
21 3e77_A Phosphoserine aminotran 94.3 0.26 9E-06 47.8 10.9 102 188-322 270-373 (377)
22 2z67_A O-phosphoseryl-tRNA(SEC 94.2 0.11 3.9E-06 50.4 8.0 109 174-320 333-454 (456)
23 2jis_A Cysteine sulfinic acid 94.1 0.041 1.4E-06 54.5 4.7 50 29-78 377-426 (515)
24 3e9k_A Kynureninase; kynurenin 93.8 0.4 1.4E-05 46.2 11.0 110 175-323 340-460 (465)
25 2qma_A Diaminobutyrate-pyruvat 93.7 0.098 3.3E-06 51.3 6.5 47 32-78 373-419 (497)
26 2yrr_A Aminotransferase, class 93.4 0.46 1.6E-05 42.7 10.1 105 180-322 244-351 (353)
27 1iug_A Putative aspartate amin 93.3 0.92 3.1E-05 40.9 12.1 97 189-324 250-348 (352)
28 3zrp_A Serine-pyruvate aminotr 93.3 0.78 2.7E-05 41.8 11.6 111 180-327 255-366 (384)
29 3isl_A Purine catabolism prote 93.2 0.39 1.3E-05 44.6 9.6 111 179-325 278-391 (416)
30 2z9v_A Aspartate aminotransfer 93.2 0.57 2E-05 43.2 10.7 111 180-325 259-372 (392)
31 2dr1_A PH1308 protein, 386AA l 92.8 0.76 2.6E-05 42.0 10.9 100 188-324 278-379 (386)
32 1js3_A DDC;, DOPA decarboxylas 92.4 0.11 3.8E-06 50.6 4.8 47 32-78 355-401 (486)
33 1m32_A 2-aminoethylphosphonate 92.3 1.3 4.5E-05 39.9 11.6 98 189-323 264-364 (366)
34 1t3i_A Probable cysteine desul 92.1 1.3 4.6E-05 40.9 11.6 110 181-325 295-414 (420)
35 1wyu_B Glycine dehydrogenase s 92.1 0.55 1.9E-05 45.8 9.3 111 174-323 327-440 (474)
36 3f0h_A Aminotransferase; RER07 92.0 1 3.5E-05 41.2 10.6 103 181-322 267-372 (376)
37 1kmj_A Selenocysteine lyase; p 92.0 2.7 9.4E-05 38.5 13.6 98 188-324 298-405 (406)
38 2dgk_A GAD-beta, GADB, glutama 91.6 0.26 9E-06 47.4 6.3 45 35-79 309-353 (452)
39 1elu_A L-cysteine/L-cystine C- 91.3 1.6 5.5E-05 39.9 11.1 94 189-320 295-388 (390)
40 4hvk_A Probable cysteine desul 91.3 2.4 8.1E-05 38.3 12.1 104 186-326 251-375 (382)
41 3kgw_A Alanine-glyoxylate amin 91.3 0.92 3.1E-05 41.5 9.4 109 181-325 277-389 (393)
42 3lvm_A Cysteine desulfurase; s 90.9 3 0.0001 38.8 12.7 100 189-327 282-402 (423)
43 1vjo_A Alanine--glyoxylate ami 90.8 1.2 4.2E-05 41.0 9.9 105 181-321 285-392 (393)
44 3m5u_A Phosphoserine aminotran 90.5 1.1 3.7E-05 43.0 9.5 98 188-322 258-358 (361)
45 3hbx_A GAD 1, glutamate decarb 89.7 0.42 1.4E-05 47.3 6.0 44 35-78 324-367 (502)
46 3hl2_A O-phosphoseryl-tRNA(SEC 89.5 0.78 2.7E-05 46.7 7.8 130 170-328 315-465 (501)
47 2c0r_A PSAT, phosphoserine ami 89.3 1.4 4.9E-05 40.3 8.9 99 188-322 260-359 (362)
48 2huf_A Alanine glyoxylate amin 89.2 1.9 6.6E-05 39.6 9.8 105 187-328 279-387 (393)
49 3dzz_A Putative pyridoxal 5'-p 88.2 5.2 0.00018 36.5 12.0 99 187-324 286-389 (391)
50 4eb5_A Probable cysteine desul 87.7 5.7 0.00019 36.1 11.8 103 187-326 252-375 (382)
51 3qm2_A Phosphoserine aminotran 87.7 1.9 6.5E-05 41.7 8.9 97 188-322 285-383 (386)
52 2ch1_A 3-hydroxykynurenine tra 87.5 2.1 7.2E-05 39.4 8.8 112 181-327 272-386 (396)
53 3cai_A Possible aminotransfera 87.3 4.7 0.00016 37.2 11.1 93 189-319 301-404 (406)
54 1v72_A Aldolase; PLP-dependent 87.0 4.2 0.00014 36.6 10.3 95 184-322 257-351 (356)
55 1qz9_A Kynureninase; kynurenin 87.0 7.3 0.00025 36.0 12.3 105 179-323 293-401 (416)
56 2fnu_A Aminotransferase; prote 86.8 2.5 8.6E-05 38.4 8.8 43 175-217 232-274 (375)
57 3nra_A Aspartate aminotransfer 86.7 2.2 7.6E-05 39.4 8.5 99 187-324 303-405 (407)
58 1bw0_A TAT, protein (tyrosine 85.8 9.5 0.00032 35.4 12.4 102 187-323 309-412 (416)
59 2bwn_A 5-aminolevulinate synth 85.1 2.2 7.4E-05 39.6 7.6 97 187-323 298-399 (401)
60 1eg5_A Aminotransferase; PLP-d 84.9 8.2 0.00028 34.9 11.3 102 187-326 256-378 (384)
61 2zyj_A Alpha-aminodipate amino 84.6 13 0.00044 34.4 12.7 97 189-325 290-394 (397)
62 3bc8_A O-phosphoseryl-tRNA(SEC 84.4 0.47 1.6E-05 47.5 2.8 77 139-217 256-347 (450)
63 3dyd_A Tyrosine aminotransfera 84.0 14 0.00046 34.9 12.8 103 187-324 320-424 (427)
64 3gju_A Putative aminotransfera 83.7 13 0.00046 35.5 12.8 41 285-326 418-458 (460)
65 3kax_A Aminotransferase, class 83.4 11 0.00039 34.1 11.6 95 188-321 283-382 (383)
66 2zc0_A Alanine glyoxylate tran 83.2 4.1 0.00014 37.7 8.6 29 295-324 376-404 (407)
67 1svv_A Threonine aldolase; str 82.9 4.5 0.00015 36.3 8.5 95 184-322 261-356 (359)
68 3ke3_A Putative serine-pyruvat 82.7 2.4 8E-05 39.6 6.8 101 186-325 270-377 (379)
69 2dkj_A Serine hydroxymethyltra 82.6 7.9 0.00027 35.6 10.3 99 187-323 277-387 (407)
70 1xi9_A Putative transaminase; 82.5 7.7 0.00026 36.1 10.3 100 185-324 298-403 (406)
71 1j32_A Aspartate aminotransfer 82.1 5.7 0.00019 36.5 9.1 108 177-323 275-386 (388)
72 4dq6_A Putative pyridoxal phos 81.6 14 0.00048 33.6 11.5 94 189-321 292-390 (391)
73 1w23_A Phosphoserine aminotran 80.8 6.3 0.00021 35.6 8.7 98 188-322 259-358 (360)
74 4ffc_A 4-aminobutyrate aminotr 80.5 11 0.00039 36.1 11.0 42 284-325 409-450 (453)
75 3dxv_A Alpha-amino-epsilon-cap 80.2 22 0.00074 33.4 12.6 42 285-326 386-427 (439)
76 3tqx_A 2-amino-3-ketobutyrate 80.2 7.8 0.00027 35.4 9.3 96 188-324 296-396 (399)
77 2gb3_A Aspartate aminotransfer 79.5 15 0.00052 34.2 11.2 110 178-326 283-404 (409)
78 3ftb_A Histidinol-phosphate am 79.4 24 0.00083 31.7 12.2 93 187-323 263-360 (361)
79 1c7n_A Cystalysin; transferase 78.9 13 0.00046 34.1 10.5 99 187-325 290-394 (399)
80 2vi8_A Serine hydroxymethyltra 78.3 16 0.00056 33.4 10.9 101 187-325 276-388 (405)
81 3a9z_A Selenocysteine lyase; P 78.3 3.5 0.00012 38.7 6.3 34 295-328 399-432 (432)
82 4a6r_A Omega transaminase; tra 78.1 10 0.00036 36.3 9.8 33 294-326 419-451 (459)
83 3a2b_A Serine palmitoyltransfe 77.5 8.8 0.0003 35.4 8.8 93 191-324 295-392 (398)
84 3fdb_A Beta C-S lyase, putativ 77.4 13 0.00043 33.8 9.7 97 187-323 274-375 (377)
85 3l8a_A METC, putative aminotra 77.3 13 0.00044 34.9 10.0 96 187-321 320-419 (421)
86 3fkd_A L-threonine-O-3-phospha 76.7 11 0.00037 34.1 9.0 98 190-330 247-348 (350)
87 2w8t_A SPT, serine palmitoyltr 76.6 14 0.00047 34.9 10.0 95 190-324 315-415 (427)
88 3mc6_A Sphingosine-1-phosphate 76.4 2.7 9.2E-05 40.6 5.1 43 36-78 328-371 (497)
89 2bkw_A Alanine-glyoxylate amin 76.4 4.9 0.00017 36.6 6.6 98 188-323 278-383 (385)
90 3oks_A 4-aminobutyrate transam 76.2 21 0.00072 34.1 11.4 39 284-322 411-449 (451)
91 3h14_A Aminotransferase, class 75.6 16 0.00056 33.5 10.0 31 295-327 355-385 (391)
92 1fc4_A 2-amino-3-ketobutyrate 75.5 12 0.0004 34.6 9.0 95 190-325 299-398 (401)
93 3gbx_A Serine hydroxymethyltra 75.3 14 0.00047 34.1 9.4 103 184-324 282-396 (420)
94 3bc8_A O-phosphoseryl-tRNA(SEC 74.9 1.2 3.9E-05 44.7 2.1 45 36-80 301-348 (450)
95 3i5t_A Aminotransferase; pyrid 74.5 15 0.0005 35.8 9.9 40 285-327 418-457 (476)
96 3ffh_A Histidinol-phosphate am 73.9 27 0.00092 31.5 10.9 89 187-320 272-362 (363)
97 3euc_A Histidinol-phosphate am 73.6 10 0.00036 34.4 8.1 88 188-321 274-365 (367)
98 3g0t_A Putative aminotransfera 73.1 41 0.0014 31.2 12.3 98 189-322 333-435 (437)
99 1d2f_A MALY protein; aminotran 72.1 31 0.001 31.6 11.0 97 187-323 286-388 (390)
100 2c81_A Glutamine-2-deoxy-scyll 71.9 32 0.0011 32.0 11.3 31 295-325 384-415 (418)
101 1sff_A 4-aminobutyrate aminotr 71.9 22 0.00077 32.9 10.1 40 285-324 385-424 (426)
102 1yiz_A Kynurenine aminotransfe 70.0 18 0.00061 33.8 9.0 27 294-322 401-427 (429)
103 3qgu_A LL-diaminopimelate amin 69.6 27 0.00093 32.8 10.2 98 188-327 342-443 (449)
104 3nx3_A Acoat, acetylornithine 69.6 24 0.0008 32.5 9.6 29 294-322 365-393 (395)
105 1mdo_A ARNB aminotransferase; 69.5 29 0.00098 31.7 10.1 31 295-325 357-387 (393)
106 3hmu_A Aminotransferase, class 69.4 27 0.00092 33.9 10.4 31 295-325 423-453 (472)
107 2oga_A Transaminase; PLP-depen 69.4 9.6 0.00033 35.5 6.9 31 295-325 367-397 (399)
108 1u08_A Hypothetical aminotrans 68.8 34 0.0012 31.2 10.5 92 188-319 287-385 (386)
109 3ecd_A Serine hydroxymethyltra 68.5 21 0.00072 32.8 9.0 102 185-324 284-397 (425)
110 1gd9_A Aspartate aminotransfer 68.4 18 0.00062 33.1 8.5 96 188-323 286-385 (389)
111 3get_A Histidinol-phosphate am 68.4 46 0.0016 30.0 11.2 90 187-321 274-364 (365)
112 3i4j_A Aminotransferase, class 68.0 20 0.0007 33.5 9.0 32 293-324 397-428 (430)
113 3mad_A Sphingosine-1-phosphate 67.9 4 0.00014 39.9 4.1 44 35-78 359-402 (514)
114 3uwc_A Nucleotide-sugar aminot 67.2 10 0.00034 34.5 6.4 43 175-217 233-276 (374)
115 3op7_A Aminotransferase class 67.2 37 0.0013 30.7 10.3 39 285-325 332-372 (375)
116 3n5m_A Adenosylmethionine-8-am 67.0 21 0.00071 33.8 8.9 29 294-322 422-450 (452)
117 3dod_A Adenosylmethionine-8-am 66.9 64 0.0022 30.5 12.3 31 294-324 413-443 (448)
118 1gc0_A Methionine gamma-lyase; 65.3 19 0.00065 33.6 8.1 118 187-320 260-397 (398)
119 1vp4_A Aminotransferase, putat 65.3 67 0.0023 29.9 12.0 30 295-325 390-419 (425)
120 1bs0_A Protein (8-amino-7-oxon 64.6 19 0.00065 32.8 7.8 26 295-320 358-383 (384)
121 1rv3_A Serine hydroxymethyltra 64.5 37 0.0013 33.0 10.3 102 184-323 318-430 (483)
122 3aow_A Putative uncharacterize 64.4 76 0.0026 30.2 12.4 29 295-324 417-445 (448)
123 2o0r_A RV0858C (N-succinyldiam 64.2 22 0.00074 33.0 8.2 27 295-323 369-395 (411)
124 1lc5_A COBD, L-threonine-O-3-p 63.8 61 0.0021 29.3 11.1 92 189-325 266-361 (364)
125 2cb1_A O-acetyl homoserine sul 63.3 65 0.0022 30.1 11.5 32 186-217 276-307 (412)
126 1jg8_A L-ALLO-threonine aldola 63.1 34 0.0012 30.5 9.1 29 295-323 317-345 (347)
127 1z7d_A Ornithine aminotransfer 62.0 55 0.0019 31.0 10.8 32 293-324 398-429 (433)
128 1s0a_A Adenosylmethionine-8-am 61.6 20 0.00069 33.5 7.6 33 294-326 394-426 (429)
129 3dr4_A Putative perosamine syn 61.6 38 0.0013 31.0 9.3 45 172-217 250-294 (391)
130 3n0l_A Serine hydroxymethyltra 60.6 50 0.0017 30.2 10.0 100 186-323 277-388 (417)
131 2dou_A Probable N-succinyldiam 60.2 74 0.0025 28.8 11.0 90 188-320 281-374 (376)
132 3vax_A Putative uncharacterize 59.9 37 0.0013 30.9 8.9 104 187-322 280-398 (400)
133 3ruy_A Ornithine aminotransfer 58.8 70 0.0024 29.1 10.6 87 191-321 303-391 (392)
134 1fg7_A Histidinol phosphate am 58.6 1.1E+02 0.0036 27.8 12.2 97 178-319 251-353 (356)
135 3piu_A 1-aminocyclopropane-1-c 58.5 1.1E+02 0.0038 28.4 12.1 39 285-324 390-432 (435)
136 1v2d_A Glutamine aminotransfer 57.1 51 0.0018 29.9 9.3 92 187-324 274-371 (381)
137 2x5f_A Aspartate_tyrosine_phen 55.9 1.2E+02 0.004 28.2 11.8 30 294-324 400-429 (430)
138 2ez2_A Beta-tyrosinase, tyrosi 55.8 61 0.0021 30.4 9.9 31 295-325 401-432 (456)
139 1o4s_A Aspartate aminotransfer 55.8 58 0.002 29.9 9.5 24 296-321 363-386 (389)
140 1iay_A ACC synthase 2, 1-amino 55.6 57 0.002 30.3 9.5 99 190-322 323-425 (428)
141 2pb2_A Acetylornithine/succiny 55.3 1.1E+02 0.0036 28.7 11.5 31 294-324 388-418 (420)
142 3tfu_A Adenosylmethionine-8-am 55.1 35 0.0012 32.9 8.2 32 293-324 422-453 (457)
143 1zod_A DGD, 2,2-dialkylglycine 54.1 93 0.0032 28.9 10.8 40 285-324 391-432 (433)
144 3ei9_A LL-diaminopimelate amin 53.1 80 0.0028 29.3 10.1 91 189-321 331-425 (432)
145 2z61_A Probable aspartate amin 53.0 43 0.0015 30.3 8.0 25 295-321 344-368 (370)
146 2x5d_A Probable aminotransfera 52.3 74 0.0025 29.3 9.7 28 295-324 371-398 (412)
147 2oqx_A Tryptophanase; lyase, p 51.5 81 0.0028 29.6 10.0 31 295-325 412-443 (467)
148 3ly1_A Putative histidinol-pho 50.7 60 0.0021 29.0 8.6 89 187-322 260-350 (354)
149 3b8x_A WBDK, pyridoxamine 5-ph 50.4 70 0.0024 29.3 9.1 115 171-318 252-390 (390)
150 1ax4_A Tryptophanase; tryptoph 49.8 43 0.0015 31.5 7.7 30 295-324 411-441 (467)
151 2o1b_A Aminotransferase, class 49.6 1.1E+02 0.0036 28.3 10.3 27 295-323 376-402 (404)
152 2vyc_A Biodegradative arginine 48.8 61 0.0021 33.9 9.3 30 189-218 443-481 (755)
153 3h7f_A Serine hydroxymethyltra 48.5 48 0.0016 31.5 7.9 100 187-323 298-413 (447)
154 3kki_A CAI-1 autoinducer synth 47.6 66 0.0023 29.6 8.5 30 294-323 374-403 (409)
155 3hl2_A O-phosphoseryl-tRNA(SEC 47.2 9 0.00031 39.0 2.6 40 35-74 318-357 (501)
156 1wyu_A Glycine dehydrogenase ( 46.1 18 0.00063 34.2 4.5 39 40-78 331-369 (438)
157 4e3q_A Pyruvate transaminase; 45.9 77 0.0026 31.3 9.1 33 294-326 438-470 (473)
158 3pj0_A LMO0305 protein; struct 45.9 1.2E+02 0.0042 27.0 9.8 94 190-319 257-357 (359)
159 1c4k_A Protein (ornithine deca 45.7 2.4E+02 0.0082 29.4 13.3 29 189-217 417-446 (730)
160 3asa_A LL-diaminopimelate amin 44.7 66 0.0023 29.6 8.0 28 295-324 366-393 (400)
161 2z67_A O-phosphoseryl-tRNA(SEC 44.0 8.6 0.00029 37.0 1.8 43 36-78 333-378 (456)
162 2oat_A Ornithine aminotransfer 43.9 2.1E+02 0.0073 26.9 12.3 30 293-322 408-437 (439)
163 2a7v_A Serine hydroxymethyltra 42.7 89 0.003 31.0 9.0 98 189-324 333-441 (490)
164 2eo5_A 419AA long hypothetical 42.6 64 0.0022 30.1 7.6 30 294-323 388-417 (419)
165 3ihj_A Alanine aminotransferas 42.0 1.1E+02 0.0037 29.8 9.4 29 295-325 466-494 (498)
166 3fvs_A Kynurenine--oxoglutarat 41.8 71 0.0024 29.4 7.7 28 294-323 394-421 (422)
167 2e7j_A SEP-tRNA:Cys-tRNA synth 41.6 13 0.00046 33.5 2.6 31 294-324 338-370 (371)
168 1uu1_A Histidinol-phosphate am 41.0 66 0.0023 28.7 7.2 83 189-319 251-333 (335)
169 3a8u_X Omega-amino acid--pyruv 40.8 2.2E+02 0.0076 26.5 11.2 31 294-324 417-447 (449)
170 3cq5_A Histidinol-phosphate am 40.6 1.4E+02 0.0048 26.9 9.5 86 189-321 280-365 (369)
171 3hdo_A Histidinol-phosphate am 39.9 71 0.0024 28.8 7.3 90 188-322 262-353 (360)
172 3lws_A Aromatic amino acid bet 39.8 1.3E+02 0.0045 26.8 9.0 95 190-320 255-355 (357)
173 1cs1_A CGS, protein (cystathio 37.1 87 0.003 28.7 7.5 26 295-320 358-383 (386)
174 2x3l_A ORN/Lys/Arg decarboxyla 36.0 1.2E+02 0.0043 28.8 8.7 29 295-324 325-353 (446)
175 2ord_A Acoat, acetylornithine 35.7 2.5E+02 0.0086 25.4 12.6 29 294-322 367-395 (397)
176 3frk_A QDTB; aminotransferase, 35.6 55 0.0019 29.7 5.8 41 175-216 232-272 (373)
177 3p1t_A Putative histidinol-pho 35.6 1.6E+02 0.0055 25.8 8.8 87 188-321 246-334 (337)
178 2cjg_A L-lysine-epsilon aminot 35.6 61 0.0021 30.8 6.4 31 294-324 418-448 (449)
179 1b9h_A AHBA synthase, protein 34.9 1.6E+02 0.0056 26.5 9.0 31 187-217 250-280 (388)
180 3bb8_A CDP-4-keto-6-deoxy-D-gl 34.7 1.5E+02 0.0051 27.7 8.9 30 188-217 305-334 (437)
181 2eh6_A Acoat, acetylornithine 32.6 2.7E+02 0.0092 24.8 10.2 85 191-320 290-374 (375)
182 3g7q_A Valine-pyruvate aminotr 31.6 2.9E+02 0.01 25.0 12.0 29 295-325 386-414 (417)
183 3ez1_A Aminotransferase MOCR f 30.4 2.3E+02 0.0079 26.0 9.3 31 294-325 386-416 (423)
184 1vef_A Acetylornithine/acetyl- 29.9 2.4E+02 0.0083 25.5 9.2 28 294-321 367-394 (395)
185 4atq_A 4-aminobutyrate transam 29.7 45 0.0015 32.8 4.4 39 284-322 415-453 (456)
186 4ao9_A Beta-phenylalanine amin 29.4 1.9E+02 0.0066 28.3 8.9 28 301-328 423-450 (454)
187 3ele_A Amino transferase; RER0 28.4 1.5E+02 0.005 26.9 7.4 40 284-325 356-397 (398)
188 3jtx_A Aminotransferase; NP_28 28.2 2.6E+02 0.009 25.1 9.1 25 294-320 370-394 (396)
189 2llz_A Uncharacterized protein 27.2 47 0.0016 26.8 3.2 65 242-320 9-78 (100)
190 2r2n_A Kynurenine/alpha-aminoa 26.2 3.9E+02 0.013 24.6 12.1 28 295-323 396-423 (425)
191 3tcm_A Alanine aminotransferas 25.7 1.4E+02 0.0047 28.9 7.1 29 295-325 467-495 (500)
192 3e2y_A Kynurenine-oxoglutarate 25.6 2.8E+02 0.0097 25.0 8.9 23 295-319 386-408 (410)
193 3acz_A Methionine gamma-lyase; 25.3 2.7E+02 0.0092 25.6 8.8 39 177-217 245-283 (389)
194 1b5p_A Protein (aspartate amin 25.1 2.6E+02 0.009 25.3 8.6 34 285-320 346-381 (385)
195 1o69_A Aminotransferase; struc 24.5 1.6E+02 0.0055 27.0 7.0 29 187-217 243-271 (394)
196 2po3_A 4-dehydrase; external a 24.4 4.2E+02 0.014 24.3 10.1 31 187-217 257-287 (424)
197 3e77_A Phosphoserine aminotran 24.3 1.1E+02 0.0038 29.1 6.0 40 39-78 258-298 (377)
198 3ffr_A Phosphoserine aminotran 24.2 61 0.0021 28.7 3.9 42 38-79 251-292 (362)
199 3b46_A Aminotransferase BNA3; 24.1 1.9E+02 0.0064 27.2 7.5 24 294-319 419-442 (447)
200 1ohv_A 4-aminobutyrate aminotr 22.7 66 0.0023 31.0 4.1 31 294-324 441-471 (472)
201 2rfv_A Methionine gamma-lyase; 22.5 3.5E+02 0.012 24.7 9.0 26 295-320 371-396 (398)
202 3m5u_A Phosphoserine aminotran 22.3 1.2E+02 0.004 28.6 5.7 40 39-78 246-287 (361)
203 1qgn_A Protein (cystathionine 22.2 4.4E+02 0.015 25.3 9.9 107 178-324 301-445 (445)
204 3f9t_A TDC, L-tyrosine decarbo 22.1 53 0.0018 29.4 3.0 43 35-78 291-333 (397)
205 1e5e_A MGL, methionine gamma-l 22.0 2.9E+02 0.0097 25.7 8.3 28 295-326 370-397 (404)
206 4adb_A Succinylornithine trans 21.8 4.4E+02 0.015 23.7 11.9 32 294-325 370-401 (406)
207 3ppl_A Aspartate aminotransfer 20.3 3.3E+02 0.011 25.0 8.3 30 294-324 391-420 (427)
No 1
>3k40_A Aromatic-L-amino-acid decarboxylase; PLP dependent protein, alpha beta protein, alternative splicing, catecholamine biosynthesis, lyase; HET: LLP; 1.75A {Drosophila melanogaster} SCOP: c.67.1.6
Probab=99.20 E-value=7.1e-11 Score=117.34 Aligned_cols=123 Identities=14% Similarity=0.114 Sum_probs=105.4
Q ss_pred cccccccCcchhhHHHHhhChhhHHHHHHHHHHHHHHHHHHHhhCCCeEEeecCCCCCCcceeeeccccCccccccccce
Q psy2480 166 MQTNEKAIALPVWTTLKSMGQTGIQDILTFNFSLVESIRQKLSEYPCLRILSHGPVSGLGLKEVTSQYLPVQTILESVQS 245 (337)
Q Consensus 166 ~q~srr~~AL~lW~~Lq~LG~d~i~~~I~~t~~La~~~~e~L~~~p~LeiL~~~~waglg~v~~~~~~~~~~~~~~~~ls 245 (337)
++.+||++++++|.+|+.+|.+++.+++++..++++++.+.|++.|+++++. +...+
T Consensus 348 ~~~sr~~~~l~l~~al~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~g~~l~~-----------------------~~~~~ 404 (475)
T 3k40_A 348 IPLGRRFRALKLWFVLRLYGVENLQAHIRRHCNFAKQFGDLCVADSRFELAA-----------------------EINMG 404 (475)
T ss_dssp -CCCGGGTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTEEESS-----------------------CCBTT
T ss_pred ccCCCcccHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEec-----------------------CCceE
Confidence 5678999999999999999999999999999999999999999999999997 56789
Q ss_pred eEEEEecCCCCCCCCCcchhhHHHHHHHHHHhhcCCCcceEEEEeeeCc-EEEEEecCCCC-ChhHHHHHHHHHHHHHhh
Q psy2480 246 CVVFQFVPKDAGWGPVPAYYDKLNSWLGQILQRDVPSVSLNLTETAAFG-TVLRICPFECS-SGGDYESFLVCLDAQVYS 323 (337)
Q Consensus 246 vVvFRy~P~~~~~e~~~~y~D~LNswLgqiL~~~~~~~~~~v~et~~~G-~~LRfcplnp~-T~edI~~~v~~L~~~~~i 323 (337)
+|+|++.+. +..|..|.+.|.+.+. +.+..+...| .++|||..++. |.+||+.+++.|++.++.
T Consensus 405 iv~f~~~~~-----------~~~~~~l~~~L~~~g~---~~~~~~~~~g~~~lR~~~~~~~tt~~di~~~~~~i~~~~~~ 470 (475)
T 3k40_A 405 LVCFRLKGS-----------NERNEALLKRINGRGH---IHLVPAKIKDVYFLRMAICSRFTQSEDMEYSWKEVSAAADE 470 (475)
T ss_dssp EEEEEESSC-----------HHHHHHHHHHHHHHTS---CBCEEEEETTEEEEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred EEEEEeCCc-----------hHHHHHHHHHHHhCCc---EEEEeeEECCEEEEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Confidence 999999642 3346666677776655 6677888766 69999999998 799999999999998876
Q ss_pred hh
Q psy2480 324 GS 325 (337)
Q Consensus 324 l~ 325 (337)
+.
T Consensus 471 ~~ 472 (475)
T 3k40_A 471 ME 472 (475)
T ss_dssp HH
T ss_pred Hh
Confidence 54
No 2
>4e1o_A HDC, histidine decarboxylase; lyase; HET: PLP PVH; 1.80A {Homo sapiens}
Probab=99.19 E-value=1.2e-10 Score=115.53 Aligned_cols=122 Identities=11% Similarity=0.132 Sum_probs=104.5
Q ss_pred cccccccCcchhhHHHHhhChhhHHHHHHHHHHHHHHHHHHHhhCCCeEEeecCCCCCCcceeeeccccCccccccccce
Q psy2480 166 MQTNEKAIALPVWTTLKSMGQTGIQDILTFNFSLVESIRQKLSEYPCLRILSHGPVSGLGLKEVTSQYLPVQTILESVQS 245 (337)
Q Consensus 166 ~q~srr~~AL~lW~~Lq~LG~d~i~~~I~~t~~La~~~~e~L~~~p~LeiL~~~~waglg~v~~~~~~~~~~~~~~~~ls 245 (337)
++.+||++++++|.+|+.+|.+++.+++++..++++.+.+.|++.|+++++. +...+
T Consensus 355 ~~~~r~~~~l~~~~al~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~g~~~~~-----------------------~~~~~ 411 (481)
T 4e1o_A 355 IPLSRRFRSVKLWFVIRSFGVKNLQAHVRHGTEMAKYFESLVRNDPSFEIPA-----------------------KRHLG 411 (481)
T ss_dssp SSSCCCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTEECCS-----------------------CCCSS
T ss_pred ccCCCCccHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEec-----------------------CCcee
Confidence 5688999999999999999999999999999999999999999999999987 56789
Q ss_pred eEEEEecCCCCCCCCCcchhhHHHHHHHHHHhhcCCCcceEEEEeeeCc-EEEEEecCCCC-ChhHHHHHHHHHHHHHhh
Q psy2480 246 CVVFQFVPKDAGWGPVPAYYDKLNSWLGQILQRDVPSVSLNLTETAAFG-TVLRICPFECS-SGGDYESFLVCLDAQVYS 323 (337)
Q Consensus 246 vVvFRy~P~~~~~e~~~~y~D~LNswLgqiL~~~~~~~~~~v~et~~~G-~~LRfcplnp~-T~edI~~~v~~L~~~~~i 323 (337)
+|+|++.+. +..|..+.+.|.+.+. +.+..+...| .++|||..++. |.+||+.+++.|++.++.
T Consensus 412 ~v~f~~~~~-----------~~~~~~l~~~L~~~g~---~~~~~~~~~g~~~lR~~~~~~~tt~~di~~~~~~i~~~~~~ 477 (481)
T 4e1o_A 412 LVVFRLKGP-----------NSLTENVLKEIAKAGR---LFLIPATIQDKLIIRFTVTSQFTTRDDILRDWNLIRDAATL 477 (481)
T ss_dssp EEEEEESSC-----------HHHHHHHHHHHHHHCS---SBCEEEEETTEEEEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred EEEEEeCCc-----------hHHHHHHHHHHHhCCe---EEEEeeEECCEEEEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Confidence 999999532 3446666676666654 6677787766 69999999998 799999999999998876
Q ss_pred h
Q psy2480 324 G 324 (337)
Q Consensus 324 l 324 (337)
+
T Consensus 478 l 478 (481)
T 4e1o_A 478 I 478 (481)
T ss_dssp H
T ss_pred H
Confidence 5
No 3
>3vp6_A Glutamate decarboxylase 1; catalytic loop SWAP, lyase; HET: LLP HLD; 2.10A {Homo sapiens} PDB: 2okj_A* 2okk_A*
Probab=99.15 E-value=3.6e-10 Score=113.41 Aligned_cols=137 Identities=13% Similarity=0.205 Sum_probs=106.6
Q ss_pred cccccccCcchhhHHHHhhChhhHHHHHHHHHHHHHHHHHHHhhCCCeEEeecCCCCCCcceeeeccccCccccccccce
Q psy2480 166 MQTNEKAIALPVWTTLKSMGQTGIQDILTFNFSLVESIRQKLSEYPCLRILSHGPVSGLGLKEVTSQYLPVQTILESVQS 245 (337)
Q Consensus 166 ~q~srr~~AL~lW~~Lq~LG~d~i~~~I~~t~~La~~~~e~L~~~p~LeiL~~~~waglg~v~~~~~~~~~~~~~~~~ls 245 (337)
++.+||++++++|.+|+.+|.+++.+++++..+++++|.+.|++.|+++++... ++..+
T Consensus 364 ~~~~r~~~al~~~~al~~~g~~gl~~~~~~~~~~a~~l~~~L~~~pg~~l~~~~---------------------~p~~~ 422 (511)
T 3vp6_A 364 IQCGRHVDIFKFWLMWKAKGTVGFENQINKCLELAEYLYAKIKNREEFEMVFNG---------------------EPEHT 422 (511)
T ss_dssp SCSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCTTEEESSSS---------------------CCSSS
T ss_pred CCCCCchHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEecC---------------------CCCeE
Confidence 567889999999999999999999999999999999999999999999998610 25688
Q ss_pred eEEEEecCCCCCCCC-Cc---chhhHHHHHHHHHHhhcCCCcceEEEEeee-CcE-EEEEecCCCC-ChhHHHHHHHHHH
Q psy2480 246 CVVFQFVPKDAGWGP-VP---AYYDKLNSWLGQILQRDVPSVSLNLTETAA-FGT-VLRICPFECS-SGGDYESFLVCLD 318 (337)
Q Consensus 246 vVvFRy~P~~~~~e~-~~---~y~D~LNswLgqiL~~~~~~~~~~v~et~~-~G~-~LRfcplnp~-T~edI~~~v~~L~ 318 (337)
+|+|+|.|++.+... .. ..++..|..+.+.|.+.+- +.+..+.. +|. ++|+|+.++. |.+||+.+++.|+
T Consensus 423 ~v~f~~~p~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~G~---~~~~~~~~~~~~~~lRi~~~~~~~t~~di~~ll~~i~ 499 (511)
T 3vp6_A 423 NVCFWYIPQSLRGVPDSPQRREKLHKVAPKIKALMMESGT---TMVGYQPQGDKANFFRMVISNPAATQSDIDFLIEEIE 499 (511)
T ss_dssp CEEEEECCGGGSSCCCCHHHHHHHHHHHHHHHHHHHHHTS---CEEEEEEETTEEEEEEECCCCTTCCHHHHHHHHHHHH
T ss_pred EEEEEEeCccccccccchhHHHHHHHHHHHHHHHHHhcCC---EEEEEEEeCCceEEEEEEecCCCCCHHHHHHHHHHHH
Confidence 999999987643111 11 1345666777777777654 56665555 344 8999999998 7999999999999
Q ss_pred HHHhhhhc
Q psy2480 319 AQVYSGSQ 326 (337)
Q Consensus 319 ~~~~il~~ 326 (337)
+.++-|+-
T Consensus 500 ~~~~~~~~ 507 (511)
T 3vp6_A 500 RLGQDLHH 507 (511)
T ss_dssp HHHC----
T ss_pred HHHHhhhh
Confidence 99988764
No 4
>2qma_A Diaminobutyrate-pyruvate transaminase and L-2,4- diaminobutyrate decarboxylase; structural genomics, APC91511.1, glutamate decarboxylase; HET: MSE; 1.81A {Vibrio parahaemolyticus}
Probab=99.11 E-value=9.5e-10 Score=108.86 Aligned_cols=126 Identities=21% Similarity=0.242 Sum_probs=103.3
Q ss_pred cccccccCcchhhHHHHhhChhhHHHHHHHHHHHHHHHHHHHhhCCCeEEeecCCCCCCcceeeeccccCccccccccce
Q psy2480 166 MQTNEKAIALPVWTTLKSMGQTGIQDILTFNFSLVESIRQKLSEYPCLRILSHGPVSGLGLKEVTSQYLPVQTILESVQS 245 (337)
Q Consensus 166 ~q~srr~~AL~lW~~Lq~LG~d~i~~~I~~t~~La~~~~e~L~~~p~LeiL~~~~waglg~v~~~~~~~~~~~~~~~~ls 245 (337)
++.+||++++++|.+++.+|.+++.+++++..+++++|.+.|++.|+++++. ++..+
T Consensus 369 ~~~~r~~~al~~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~-----------------------~~~~~ 425 (497)
T 2qma_A 369 IATTKRFDALKVFMTMQNVGPKALGDMYDHLLAQTLEVADMIRTNDQFELLA-----------------------EPSLS 425 (497)
T ss_dssp -CCSCCCTHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHTCTTEEECS-----------------------CCSSS
T ss_pred CCCCCchhHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEEc-----------------------CCCce
Confidence 3568899999999999999999999999999999999999999999999986 46688
Q ss_pred eEEEEecCCCCCCCCCcchhhHHHHHHHHHHhhcCCCcceEEEEeeeCc-EEEEEecCCCC-ChhHHHHHHHHHHHHHhh
Q psy2480 246 CVVFQFVPKDAGWGPVPAYYDKLNSWLGQILQRDVPSVSLNLTETAAFG-TVLRICPFECS-SGGDYESFLVCLDAQVYS 323 (337)
Q Consensus 246 vVvFRy~P~~~~~e~~~~y~D~LNswLgqiL~~~~~~~~~~v~et~~~G-~~LRfcplnp~-T~edI~~~v~~L~~~~~i 323 (337)
+|+|++.|.+. ..+.+|..+.+.+.+.+- +.+..+..+| .++|||+.++. |.+||+.+++.|++.++.
T Consensus 426 ~v~f~~~~~~~-------~~~~l~~~l~~~l~~~G~---~~~~~~~~~g~~~lRis~~~~~~t~edi~~~~~~l~~~~~~ 495 (497)
T 2qma_A 426 TVLFRATHETA-------DLDELNKALRLEALTRGI---AVLGETIVDGKTALKFTILNPCLTTSDFESLLSKINMLAVE 495 (497)
T ss_dssp EEEEEECCSSS-------CHHHHHHHHHHHHHHHTS---CBCEEEEETTEEEEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEcCCcc-------CHHHHHHHHHHHHHhCCC---EEEEeeEECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHh
Confidence 99999976432 246778777777766654 3344555555 69999998887 799999999999987765
Q ss_pred h
Q psy2480 324 G 324 (337)
Q Consensus 324 l 324 (337)
+
T Consensus 496 ~ 496 (497)
T 2qma_A 496 L 496 (497)
T ss_dssp C
T ss_pred h
Confidence 3
No 5
>2jis_A Cysteine sulfinic acid decarboxylase; pyridoxal phosphate, alternative splicing, pyridoxal phosphate (PLP), structural genomics consortium (SGC); HET: PLP; 1.6A {Homo sapiens}
Probab=99.10 E-value=7e-10 Score=110.64 Aligned_cols=131 Identities=15% Similarity=0.210 Sum_probs=103.4
Q ss_pred ccccccCcchhhHHHHhhChhhHHHHHHHHHHHHHHHHHHHhhCCCeEEeecCCCCCCcceeeeccccCcccccccccee
Q psy2480 167 QTNEKAIALPVWTTLKSMGQTGIQDILTFNFSLVESIRQKLSEYPCLRILSHGPVSGLGLKEVTSQYLPVQTILESVQSC 246 (337)
Q Consensus 167 q~srr~~AL~lW~~Lq~LG~d~i~~~I~~t~~La~~~~e~L~~~p~LeiL~~~~waglg~v~~~~~~~~~~~~~~~~lsv 246 (337)
+.+||++++++|.+++.+|.+++.+++++..++++++.+.|++.|+++++. ++..+.
T Consensus 377 ~~~rr~~al~~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~g~~~~~-----------------------~~~~~~ 433 (515)
T 2jis_A 377 QCGRRVDCLKLWLMWKAQGDQGLERRIDQAFVLARYLVEEMKKREGFELVM-----------------------EPEFVN 433 (515)
T ss_dssp CSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEEESS-----------------------CCSSSE
T ss_pred CCCCcccHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEeC-----------------------CCCeeE
Confidence 678899999999999999999999999999999999999999999999987 355788
Q ss_pred EEEEecCCCCC----CCCCcchhhHHHHHHHHHHhhcCCCcceEEEEeeeCc--EEEEEecCCCC-ChhHHHHHHHHHHH
Q psy2480 247 VVFQFVPKDAG----WGPVPAYYDKLNSWLGQILQRDVPSVSLNLTETAAFG--TVLRICPFECS-SGGDYESFLVCLDA 319 (337)
Q Consensus 247 VvFRy~P~~~~----~e~~~~y~D~LNswLgqiL~~~~~~~~~~v~et~~~G--~~LRfcplnp~-T~edI~~~v~~L~~ 319 (337)
|+|+|.|++.. .+.....++++|..+.+.+.+.+- +.+..+...| .++|+|+.++. |.+||+.+++.|++
T Consensus 434 v~f~~~p~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~G~---~~~~~~~~~~~~~~lRis~~~~~~t~edid~~~~~l~~ 510 (515)
T 2jis_A 434 VCFWFVPPSLRGKQESPDYHERLSKVAPVLKERMVKEGS---MMIGYQPHGTRGNFFRVVVANSALTCADMDFLLNELER 510 (515)
T ss_dssp EEEEECCGGGTTCTTSTTHHHHHHTHHHHHHHHHHHHTS---CEEEEEEETTEEEEEEEECCCTTCCHHHHHHHHHHHHH
T ss_pred EEEEEeCccccccccchhHHHHHHHHHHHHHHHHHhcCC---EEEEEEEECCceEEEEEEeCCCCCCHHHHHHHHHHHHH
Confidence 99999875311 011123455566667777777654 5555555433 59999998886 89999999999998
Q ss_pred HHhh
Q psy2480 320 QVYS 323 (337)
Q Consensus 320 ~~~i 323 (337)
.++.
T Consensus 511 ~~~~ 514 (515)
T 2jis_A 511 LGQD 514 (515)
T ss_dssp HHTT
T ss_pred HHhh
Confidence 7654
No 6
>2okj_A Glutamate decarboxylase 1; PLP-dependent decarboxylase, lyase; HET: LLP PLZ; 2.30A {Homo sapiens} PDB: 2okk_A*
Probab=99.02 E-value=2.4e-09 Score=106.18 Aligned_cols=135 Identities=12% Similarity=0.173 Sum_probs=104.4
Q ss_pred cccccccCcchhhHHHHhhChhhHHHHHHHHHHHHHHHHHHHhhCCCeEEeecCCCCCCcceeeeccccCccccccccce
Q psy2480 166 MQTNEKAIALPVWTTLKSMGQTGIQDILTFNFSLVESIRQKLSEYPCLRILSHGPVSGLGLKEVTSQYLPVQTILESVQS 245 (337)
Q Consensus 166 ~q~srr~~AL~lW~~Lq~LG~d~i~~~I~~t~~La~~~~e~L~~~p~LeiL~~~~waglg~v~~~~~~~~~~~~~~~~ls 245 (337)
++.+||++++++|.+++++|.+++.+++++..++++++.+.|++.|+++++... ++..+
T Consensus 361 ~~~~rr~~~l~~~a~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~---------------------~p~~~ 419 (504)
T 2okj_A 361 IQCGRHVDIFKFWLMWKAKGTVGFENQINKCLELAEYLYAKIKNREEFEMVFNG---------------------EPEHT 419 (504)
T ss_dssp SCSSCBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEESSSS---------------------CCSSS
T ss_pred CCCCCCccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEecC---------------------CCCeE
Confidence 367889999999999999999999999999999999999999999999998610 25678
Q ss_pred eEEEEecCCCCC-CCCC---cchhhHHHHHHHHHHhhcCCCcceEEEEeeeCc--EEEEEecCCCC-ChhHHHHHHHHHH
Q psy2480 246 CVVFQFVPKDAG-WGPV---PAYYDKLNSWLGQILQRDVPSVSLNLTETAAFG--TVLRICPFECS-SGGDYESFLVCLD 318 (337)
Q Consensus 246 vVvFRy~P~~~~-~e~~---~~y~D~LNswLgqiL~~~~~~~~~~v~et~~~G--~~LRfcplnp~-T~edI~~~v~~L~ 318 (337)
.|+|++.|.+.. .+.. .+..+++|..+.+.|.+.+- +.+..+...| .++|+|+.|+. |.+||+.+++.|+
T Consensus 420 ~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~G~---~~~~~~~~~~~~~~lRis~~~~~~t~edi~~~~~~l~ 496 (504)
T 2okj_A 420 NVCFWYIPQSLRGVPDSPQRREKLHKVAPKIKALMMESGT---TMVGYQPQGDKANFFRMVISNPAATQSDIDFLIEEIE 496 (504)
T ss_dssp CEEEEECCGGGSSCCCCHHHHHHHTTHHHHHHHHHHHHTS---CEEEEEEETTEEEEEEECCCCTTCCHHHHHHHHHHHH
T ss_pred EEEEEEeCccccccccchhhHHHHHHHHHHHHHHHHhCCc---EEEEeeEECCceEEEEEEeCCCCCCHHHHHHHHHHHH
Confidence 899999875310 0000 12234567777777777654 5666566654 49999999887 7999999999999
Q ss_pred HHHhhh
Q psy2480 319 AQVYSG 324 (337)
Q Consensus 319 ~~~~il 324 (337)
+.++.+
T Consensus 497 ~~~~~~ 502 (504)
T 2okj_A 497 RLGQDL 502 (504)
T ss_dssp HHHTC-
T ss_pred HHHHHH
Confidence 887653
No 7
>1js3_A DDC;, DOPA decarboxylase; carbidopa, parkinson'S disease, vitamin; HET: PLP 142; 2.25A {Sus scrofa} SCOP: c.67.1.6 PDB: 1js6_A* 3rch_A* 3rbl_A 3rbf_A*
Probab=98.96 E-value=7.8e-09 Score=101.66 Aligned_cols=125 Identities=16% Similarity=0.198 Sum_probs=102.8
Q ss_pred cccccccCcchhhHHHHhhChhhHHHHHHHHHHHHHHHHHHHhhCCCeEEeecCCCCCCcceeeeccccCccccccccce
Q psy2480 166 MQTNEKAIALPVWTTLKSMGQTGIQDILTFNFSLVESIRQKLSEYPCLRILSHGPVSGLGLKEVTSQYLPVQTILESVQS 245 (337)
Q Consensus 166 ~q~srr~~AL~lW~~Lq~LG~d~i~~~I~~t~~La~~~~e~L~~~p~LeiL~~~~waglg~v~~~~~~~~~~~~~~~~ls 245 (337)
++.+||+++++.|.+++.+|.+++.+++++..++++.+.+.|++.|+++++. ++..+
T Consensus 351 ~~~~rr~~~~~~~~al~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~-----------------------~~~~~ 407 (486)
T 1js3_A 351 LPLGRRFRSLKMWFVFRMYGVKGLQAYIRKHVQLSHEFEAFVLQDPRFEVCA-----------------------EVTLG 407 (486)
T ss_dssp SCSCCCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTEEECS-----------------------CCCSS
T ss_pred CCCCCchhHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeC-----------------------CCcee
Confidence 3568899999999999999999999999999999999999999999999986 45688
Q ss_pred eEEEEecCCCCCCCCCcchhhHHHHHHHHHHhhcCCCcceEEEEeeeCc-EEEEEecCCCC-ChhHHHHHHHHHHHHHhh
Q psy2480 246 CVVFQFVPKDAGWGPVPAYYDKLNSWLGQILQRDVPSVSLNLTETAAFG-TVLRICPFECS-SGGDYESFLVCLDAQVYS 323 (337)
Q Consensus 246 vVvFRy~P~~~~~e~~~~y~D~LNswLgqiL~~~~~~~~~~v~et~~~G-~~LRfcplnp~-T~edI~~~v~~L~~~~~i 323 (337)
+|+|++.+. +.+|..+.+.|.+.+. +.+..+..+| .++|+|..++. |.+||+.+++.|++.++.
T Consensus 408 ~v~f~~~~~-----------~~~~~~l~~~L~~~g~---~~~~~~~~~~~~~lRi~~~~~~~t~~di~~~~~~l~~~~~~ 473 (486)
T 1js3_A 408 LVCFRLKGS-----------DGLNEALLERINSARK---IHLVPCRLRGQFVLRFAICSRKVESGHVRLAWEHIRGLAAE 473 (486)
T ss_dssp EEEEEESSC-----------HHHHHHHHHHHHHHTS---CBCEEEEETTEEEEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred EEEEEecCh-----------HHHHHHHHHHHHhcCC---EEEEEEEECCEEEEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Confidence 999998532 3456666676665543 4556666655 69999999986 799999999999998887
Q ss_pred hhcc
Q psy2480 324 GSQG 327 (337)
Q Consensus 324 l~~t 327 (337)
+...
T Consensus 474 ~~~~ 477 (486)
T 1js3_A 474 LLAA 477 (486)
T ss_dssp HHC-
T ss_pred HHhh
Confidence 7654
No 8
>2dgk_A GAD-beta, GADB, glutamate decarboxylase beta; gadbd1-14, autoinhibition, substituted aldamine, lyase; HET: PLP; 1.90A {Escherichia coli} PDB: 2dgm_A* 1pmo_A* 2dgl_A* 1pmm_A* 3fz6_A* 3fz7_A 3fz8_A* 1xey_A*
Probab=98.53 E-value=1.1e-06 Score=85.55 Aligned_cols=132 Identities=13% Similarity=0.060 Sum_probs=95.3
Q ss_pred cccccc-CcchhhHHHHhhChhhHHHHHHHHHHHHHHHHHHHhhCCCeEEeecCCCCCCcceeeeccccCccccccccce
Q psy2480 167 QTNEKA-IALPVWTTLKSMGQTGIQDILTFNFSLVESIRQKLSEYPCLRILSHGPVSGLGLKEVTSQYLPVQTILESVQS 245 (337)
Q Consensus 167 q~srr~-~AL~lW~~Lq~LG~d~i~~~I~~t~~La~~~~e~L~~~p~LeiL~~~~waglg~v~~~~~~~~~~~~~~~~ls 245 (337)
+.+|+. .++..|.+++.+|.+++.+++++..++++++.+.|++.++++++.+.. -.+..+
T Consensus 302 ~~~r~~~~~~~~~aal~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~-------------------~~~~~~ 362 (452)
T 2dgk_A 302 NFSRPAGQVIAQYYEFLRLGREGYTKVQNASYQVAAYLADEIAKLGPYEFICTGR-------------------PDEGIP 362 (452)
T ss_dssp CCSCBCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSEEEEEECC-------------------TTTBSS
T ss_pred CCCChhHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEecCCC-------------------CCCCeE
Confidence 345665 788999999999999999999999999999999999999999986200 015678
Q ss_pred eEEEEecCCCCCCCCCcchhhHHH-HHHHHHHhhcCCCcceEEEEeee-CcEEEEEecCCCCChhHHHHHHHHHHHHHhh
Q psy2480 246 CVVFQFVPKDAGWGPVPAYYDKLN-SWLGQILQRDVPSVSLNLTETAA-FGTVLRICPFECSSGGDYESFLVCLDAQVYS 323 (337)
Q Consensus 246 vVvFRy~P~~~~~e~~~~y~D~LN-swLgqiL~~~~~~~~~~v~et~~-~G~~LRfcplnp~T~edI~~~v~~L~~~~~i 323 (337)
+|+|++.+.... .+| ..+.+.|.+.+-........+.. ++.++|+|..++.|.+||+.+++.|++.++.
T Consensus 363 ~v~f~~~~~~~~---------~~~~~~l~~~L~~~Gi~v~~~~~~~~~~~~~~lRis~~~~~t~e~id~li~~l~~~~~~ 433 (452)
T 2dgk_A 363 AVCFKLKDGEDP---------GYTLYDLSERLRLRGWQVPAFTLGGEATDIVVMRIMCRRGFEMDFAELLLEDYKASLKY 433 (452)
T ss_dssp EEEEEECTTCCC---------SCCHHHHHHHHHHTTCBCCEEECSTTCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHHH
T ss_pred EEEEEecCcccc---------cCCHHHHHHHHHhcCCeeeeeeCCcccCCeEEEEEEecCCCCHHHHHHHHHHHHHHHHH
Confidence 999999653211 112 23444554433321222222233 3479999999999999999999999998877
Q ss_pred hhc
Q psy2480 324 GSQ 326 (337)
Q Consensus 324 l~~ 326 (337)
+..
T Consensus 434 ~~~ 436 (452)
T 2dgk_A 434 LSD 436 (452)
T ss_dssp HHH
T ss_pred HHh
Confidence 654
No 9
>3hbx_A GAD 1, glutamate decarboxylase 1; calmodulin-binding, lyase, pyridoxal phosphate; HET: LLP; 2.67A {Arabidopsis thaliana}
Probab=98.32 E-value=5.4e-06 Score=82.71 Aligned_cols=126 Identities=16% Similarity=0.120 Sum_probs=92.9
Q ss_pred CcchhhHHHHhhChhhHHHHHHHHHHHHHHHHHHHhhCCCeEEeecCCCCCCcceeeeccccCccccccccceeEEEEec
Q psy2480 173 IALPVWTTLKSMGQTGIQDILTFNFSLVESIRQKLSEYPCLRILSHGPVSGLGLKEVTSQYLPVQTILESVQSCVVFQFV 252 (337)
Q Consensus 173 ~AL~lW~~Lq~LG~d~i~~~I~~t~~La~~~~e~L~~~p~LeiL~~~~waglg~v~~~~~~~~~~~~~~~~lsvVvFRy~ 252 (337)
.++..|.+|+.+|.+++.+++++..+++++|.+.|++.++++++.. ++..++|+|++.
T Consensus 324 ~~~a~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~----------------------~~~~~~v~f~~~ 381 (502)
T 3hbx_A 324 QVIAQYYQLIRLGHEGYRNVMENCRENMIVLREGLEKTERFNIVSK----------------------DEGVPLVAFSLK 381 (502)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEECSC----------------------SSSSSEEEEEES
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeC----------------------CCCceEEEEEec
Confidence 6789999999999999999999999999999999999999999971 156889999996
Q ss_pred CCCCCCCCCcchhhHHHH-HHHHHHhhcCCCcceEEEEeee-CcEEEEEecCCCCChhHHHHHHHHHHHHHhhhhccccc
Q psy2480 253 PKDAGWGPVPAYYDKLNS-WLGQILQRDVPSVSLNLTETAA-FGTVLRICPFECSSGGDYESFLVCLDAQVYSGSQGLFH 330 (337)
Q Consensus 253 P~~~~~e~~~~y~D~LNs-wLgqiL~~~~~~~~~~v~et~~-~G~~LRfcplnp~T~edI~~~v~~L~~~~~il~~t~~~ 330 (337)
+... +|. .+.+.|.+.+-........+.. +..++|++.-...|.+|++.+++.|++.++.+...-..
T Consensus 382 ~~~~-----------~~~~~l~~~L~~~Gi~v~~~~~p~~~~~~~~lRisv~~~~t~edid~li~~L~~~l~~l~~~~~~ 450 (502)
T 3hbx_A 382 DSSC-----------HTEFEISDMLRRYGWIVPAYTMPPNAQHITVLRVVIREDFSRTLAERLVIDIEKVMRELDELPSR 450 (502)
T ss_dssp SCSS-----------CCHHHHHHHHHTTTCBCCEEECCTTCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHHHHHTCC--
T ss_pred CCCc-----------CCHHHHHHHHHhCCcEEeeccCCcccCCceEEEEEeCCCCCHHHHHHHHHHHHHHHHHHHhCccc
Confidence 4321 111 3445555443321111112222 34799999888789999999999999998888765444
Q ss_pred c
Q psy2480 331 L 331 (337)
Q Consensus 331 ~ 331 (337)
+
T Consensus 451 ~ 451 (502)
T 3hbx_A 451 V 451 (502)
T ss_dssp -
T ss_pred c
Confidence 4
No 10
>3mc6_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxyl phosphate; HET: LLP; 3.15A {Saccharomyces cerevisiae}
Probab=97.26 E-value=0.0018 Score=63.39 Aligned_cols=110 Identities=15% Similarity=0.167 Sum_probs=80.4
Q ss_pred chhhHHHHhhChhhHHHHHHHHHHHHHHHHHHHhh-CCCeEEeecCCCCCCcceeeeccccCccccccccceeEEEEecC
Q psy2480 175 LPVWTTLKSMGQTGIQDILTFNFSLVESIRQKLSE-YPCLRILSHGPVSGLGLKEVTSQYLPVQTILESVQSCVVFQFVP 253 (337)
Q Consensus 175 L~lW~~Lq~LG~d~i~~~I~~t~~La~~~~e~L~~-~p~LeiL~~~~waglg~v~~~~~~~~~~~~~~~~lsvVvFRy~P 253 (337)
+..|.+++.+|.+++.+++++..++++.+.+.|++ .|+++++. +...+.++|+..
T Consensus 329 ~a~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~~~~g~~~~~-----------------------~~~~~~v~~~~~- 384 (497)
T 3mc6_A 329 VGCWATMVNMGENGYIESCQEIVGAAMKFKKYIQENIPDLDIMG-----------------------NPRYSVISFSSK- 384 (497)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCTTCEECS-----------------------CCCSSEEEEECT-
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEec-----------------------CCCeeEEEEeCC-
Confidence 34999999999999999999999999999999999 69999986 456778888742
Q ss_pred CCCCCCCCcchhhHHHHHHHHHHhhcCCCcceEEEEeeeCcEEEEEecCCCCChhHHHHHHHHHHHHHhhhhc
Q psy2480 254 KDAGWGPVPAYYDKLNSWLGQILQRDVPSVSLNLTETAAFGTVLRICPFECSSGGDYESFLVCLDAQVYSGSQ 326 (337)
Q Consensus 254 ~~~~~e~~~~y~D~LNswLgqiL~~~~~~~~~~v~et~~~G~~LRfcplnp~T~edI~~~v~~L~~~~~il~~ 326 (337)
+.+ ..+ +.+.|.+.+ +.+... ....++|+|+. ..|.+|++++++.|++.++.+..
T Consensus 385 -~~~-------~~~----l~~~L~~~G----i~v~~~-~~~~~~ri~~~-~~t~e~i~~~~~~L~~~l~~~~~ 439 (497)
T 3mc6_A 385 -TLN-------IHE----LSDRLSKKG----WHFNAL-QKPVALHMAFT-RLSAHVVDEICDILRTTVQELKS 439 (497)
T ss_dssp -TTT-------HHH----HHHHHHTTT----CBCEEC-CSSCCEEEECC-TTTTCTHHHHHHHHHHHHHHHTC
T ss_pred -CCC-------HHH----HHHHHHhCC----EEEecC-CCCCeEEEEEe-CCCHHHHHHHHHHHHHHHHHHHh
Confidence 211 122 233443332 222221 12236799888 56899999999999998877654
No 11
>3mad_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxal phosphate; HET: LLP; 2.00A {Symbiobacterium thermophilum} PDB: 3maf_A* 3mau_A* 3mbb_A*
Probab=96.78 E-value=0.0073 Score=59.56 Aligned_cols=111 Identities=14% Similarity=0.202 Sum_probs=80.4
Q ss_pred cchhhHHHHhhChhhHHHHHHHHHHHHHHHHHHHhhCCCeEEeecCCCCCCcceeeeccccCccccccccceeEEEEecC
Q psy2480 174 ALPVWTTLKSMGQTGIQDILTFNFSLVESIRQKLSEYPCLRILSHGPVSGLGLKEVTSQYLPVQTILESVQSCVVFQFVP 253 (337)
Q Consensus 174 AL~lW~~Lq~LG~d~i~~~I~~t~~La~~~~e~L~~~p~LeiL~~~~waglg~v~~~~~~~~~~~~~~~~lsvVvFRy~P 253 (337)
.+..|.+++.+|.+++.+++++..++++++.+.|++.|+++++. +. ..++.|+.
T Consensus 360 ~~a~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~-----------------------~~-~~~~~~~~-- 413 (514)
T 3mad_A 360 SATAWAAMLSLGEEGYLDATRRILQAADRLKAGVRAIPSLKILG-----------------------DP-LWVIAVAS-- 413 (514)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTCEESS-----------------------CC-SSEEEEEC--
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEeC-----------------------CC-eEEEEEeC--
Confidence 46899999999999999999999999999999999999999886 12 33555543
Q ss_pred CCCCCCCCcchhhHHHHHHHHHHhhcCCCcceEEEEeeeCcEEEEEecCCCC-ChhHHHHHHHHHHHHHhhhhc
Q psy2480 254 KDAGWGPVPAYYDKLNSWLGQILQRDVPSVSLNLTETAAFGTVLRICPFECS-SGGDYESFLVCLDAQVYSGSQ 326 (337)
Q Consensus 254 ~~~~~e~~~~y~D~LNswLgqiL~~~~~~~~~~v~et~~~G~~LRfcplnp~-T~edI~~~v~~L~~~~~il~~ 326 (337)
.+.+ .++ +.+.|.+. ++.+ .....+-++|+|+.++. +.++|+++++.|++.++.+..
T Consensus 414 ~~~~-------~~~----l~~~L~~~----Gi~v-~g~~~~~~~Ri~~~~~~~~~e~i~~~l~~L~~~l~~~~~ 471 (514)
T 3mad_A 414 DELN-------IYQ----VMEEMAGR----GWRL-NGLHRPPAFHVALTLRHTEPGVVDRFLADLQDAVAQVRA 471 (514)
T ss_dssp SSSC-------HHH----HHHHHHTT----TCBC-EEETTTTEEEEECCGGGGSTTHHHHHHHHHHHHHHHHHH
T ss_pred CCCC-------HHH----HHHHHHhc----CCEe-ccCCCCCeEEEEEecCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 2221 122 33444333 2334 22223457999998887 579999999999998887654
No 12
>3vp6_A Glutamate decarboxylase 1; catalytic loop SWAP, lyase; HET: LLP HLD; 2.10A {Homo sapiens} PDB: 2okj_A* 2okk_A*
Probab=95.75 E-value=0.0068 Score=60.51 Aligned_cols=68 Identities=19% Similarity=0.389 Sum_probs=56.7
Q ss_pred cHHHHhhchhhHHHHHhcCchhHHHHHHHHHHHHHHHHHhhccCCceEEeecCCCCCCchhhhhhccCCcccccccccee
Q psy2480 29 QTNEKAIALPVWTTLKSMGQTGIQDILTFNFSLVESVRQKLSEYPCLRILSHGPVSGMGLKEVTSQYLPVQTILESVQSC 108 (337)
Q Consensus 29 ~~~~kl~aLplW~alQ~Lg~~~I~~ri~~Af~ls~~l~~~L~~~~~I~ils~~~~~~~~~~d~~~~~~~~~~lfe~~~pv 108 (337)
+...+.+++.+|.+++++|.+++-+++++..++++.+.+.|++.++++++... +-..+.
T Consensus 365 ~~~r~~~al~~~~al~~~g~~gl~~~~~~~~~~a~~l~~~L~~~pg~~l~~~~---------------------~p~~~~ 423 (511)
T 3vp6_A 365 QCGRHVDIFKFWLMWKAKGTVGFENQINKCLELAEYLYAKIKNREEFEMVFNG---------------------EPEHTN 423 (511)
T ss_dssp CSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCTTEEESSSS---------------------CCSSSC
T ss_pred CCCCchHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEecC---------------------CCCeEE
Confidence 33445689999999999999999999999999999999999999999998310 123567
Q ss_pred EEEEeccCC
Q psy2480 109 VVFQFVPKD 117 (337)
Q Consensus 109 vvFqf~~~~ 117 (337)
|+|.|.|..
T Consensus 424 v~f~~~p~~ 432 (511)
T 3vp6_A 424 VCFWYIPQS 432 (511)
T ss_dssp EEEEECCGG
T ss_pred EEEEEeCcc
Confidence 889998875
No 13
>1wyu_A Glycine dehydrogenase (decarboxylating) subunit 1; alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_A* 1wyv_A*
Probab=95.59 E-value=0.071 Score=51.22 Aligned_cols=100 Identities=11% Similarity=0.142 Sum_probs=68.9
Q ss_pred HHhhChhhHHHHHHHHHHHHHHHHHHHhhCCCeEEeecCCCCCCcceeeeccccCccccccccceeEEEEecCCCCCCCC
Q psy2480 181 LKSMGQTGIQDILTFNFSLVESIRQKLSEYPCLRILSHGPVSGLGLKEVTSQYLPVQTILESVQSCVVFQFVPKDAGWGP 260 (337)
Q Consensus 181 Lq~LG~d~i~~~I~~t~~La~~~~e~L~~~p~LeiL~~~~waglg~v~~~~~~~~~~~~~~~~lsvVvFRy~P~~~~~e~ 260 (337)
+..+|.+++.++.++..++++++.+.|++.|+++++.. .....+++|++. .+
T Consensus 334 l~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~----------------------~~~~~~~~~~~~---~~--- 385 (438)
T 1wyu_A 334 LAALGPEGLREVALKSVEMAHKLHALLLEVPGVRPFTP----------------------KPFFNEFALALP---KD--- 385 (438)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTCEECSC----------------------SSBCSEEEEECS---SC---
T ss_pred HHHhCHHHHHHHHHHHHHHHHHHHHHHhcCCCeEECCC----------------------CCeEEEEEEeCC---CC---
Confidence 67788888999999999999999999999999998751 123455667652 11
Q ss_pred CcchhhHHHHHHHHHHhhcCCCcceEE--EEeee-CcEEEEEecCCCCChhHHHHHHHHHHHH
Q psy2480 261 VPAYYDKLNSWLGQILQRDVPSVSLNL--TETAA-FGTVLRICPFECSSGGDYESFLVCLDAQ 320 (337)
Q Consensus 261 ~~~y~D~LNswLgqiL~~~~~~~~~~v--~et~~-~G~~LRfcplnp~T~edI~~~v~~L~~~ 320 (337)
.+++. +.|.+.+ +.+ ..... .+.++|+|+-...|.+||+++++.|++.
T Consensus 386 ----~~~~~----~~L~~~g----i~v~~~~~~~~~~~~lRis~~~~~t~edi~~~~~~l~~~ 436 (438)
T 1wyu_A 386 ----PEAVR----RALAERG----FHGATPVPREYGENLALFAATELHEEEDLLALREALKEV 436 (438)
T ss_dssp ----HHHHH----HHHHHTT----CCCCEECCTTSCSSEEEEECCTTCCHHHHHHHHHHHHHH
T ss_pred ----HHHHH----HHHHHCC----ceeccccccccCCCeEEEEecccCCHHHHHHHHHHHHHH
Confidence 12233 3333322 223 22222 2469999998666999999999999864
No 14
>2fyf_A PSAT, phosphoserine aminotransferase; PLP-dependent enzyme, dimer, structural genomics; HET: PLP; 1.50A {Mycobacterium tuberculosis} PDB: 3vom_A*
Probab=95.33 E-value=0.12 Score=48.52 Aligned_cols=99 Identities=16% Similarity=0.129 Sum_probs=63.9
Q ss_pred HHHHHHHHHHHHHHHHHHHhhCCCeEEeecCCCCCCcceeeeccccCccccccccce-eEEEEecCCCCCCCCCcchhhH
Q psy2480 189 IQDILTFNFSLVESIRQKLSEYPCLRILSHGPVSGLGLKEVTSQYLPVQTILESVQS-CVVFQFVPKDAGWGPVPAYYDK 267 (337)
Q Consensus 189 i~~~I~~t~~La~~~~e~L~~~p~LeiL~~~~waglg~v~~~~~~~~~~~~~~~~ls-vVvFRy~P~~~~~e~~~~y~D~ 267 (337)
+.++.++..++++.+.+.|++.|++++....| +...+ .+.|++ |++.+ .+
T Consensus 296 ~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~--------------------~~~~~~~~~~~~-~~~~~-------~~- 346 (398)
T 2fyf_A 296 LDWAVKRTADSSQRLYSWAQERPYTTPFVTDP--------------------GLRSQVVGTIDF-VDDVD-------AG- 346 (398)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSTTEEESCCSG--------------------GGBCSSEEEEEE-CTTSC-------HH-
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCceeccCCh--------------------hhcCCcEEEEEC-CCCCC-------HH-
Confidence 66778888899999999999999988873101 12345 778887 33322 11
Q ss_pred HHHHHHHHHhhcCCCcceEEEE-ee-eCcEEEEEecCCCCChhHHHHHHHHHHHHHhh
Q psy2480 268 LNSWLGQILQRDVPSVSLNLTE-TA-AFGTVLRICPFECSSGGDYESFLVCLDAQVYS 323 (337)
Q Consensus 268 LNswLgqiL~~~~~~~~~~v~e-t~-~~G~~LRfcplnp~T~edI~~~v~~L~~~~~i 323 (337)
.+.+.|.+.+ +.+.. .. .++.++|+|+-...|.+|++++++.|++.++.
T Consensus 347 ---~l~~~L~~~g----I~v~~g~~~~~~~~iRis~~~~~t~e~i~~~~~~l~~~l~~ 397 (398)
T 2fyf_A 347 ---TVAKILRANG----IVDTEPYRKLGRNQLRVAMFPAVEPDDVSALTECVDWVVER 397 (398)
T ss_dssp ---HHHHHHHHTT----CBCCSCCTTTCSSEEEEECCTTSCHHHHHHHHHHHHHHHHT
T ss_pred ---HHHHHHHHCC----cEEecCcccCCCCEEEEEecCCCCHHHHHHHHHHHHHHHHh
Confidence 2233333321 22211 11 23468999998877999999999999887643
No 15
>3k40_A Aromatic-L-amino-acid decarboxylase; PLP dependent protein, alpha beta protein, alternative splicing, catecholamine biosynthesis, lyase; HET: LLP; 1.75A {Drosophila melanogaster} SCOP: c.67.1.6
Probab=95.27 E-value=0.018 Score=56.81 Aligned_cols=48 Identities=13% Similarity=0.212 Sum_probs=45.2
Q ss_pred HHHhhchhhHHHHHhcCchhHHHHHHHHHHHHHHHHHhhccCCceEEe
Q psy2480 31 NEKAIALPVWTTLKSMGQTGIQDILTFNFSLVESVRQKLSEYPCLRIL 78 (337)
Q Consensus 31 ~~kl~aLplW~alQ~Lg~~~I~~ri~~Af~ls~~l~~~L~~~~~I~il 78 (337)
..+.+++.+|.+++++|.+++-+++++..++++.+.+.|+++++++++
T Consensus 351 sr~~~~l~l~~al~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~g~~l~ 398 (475)
T 3k40_A 351 GRRFRALKLWFVLRLYGVENLQAHIRRHCNFAKQFGDLCVADSRFELA 398 (475)
T ss_dssp CGGGTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTEEES
T ss_pred CCcccHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEe
Confidence 345789999999999999999999999999999999999999999998
No 16
>4e1o_A HDC, histidine decarboxylase; lyase; HET: PLP PVH; 1.80A {Homo sapiens}
Probab=94.93 E-value=0.02 Score=56.32 Aligned_cols=49 Identities=12% Similarity=0.302 Sum_probs=45.4
Q ss_pred HHHHhhchhhHHHHHhcCchhHHHHHHHHHHHHHHHHHhhccCCceEEe
Q psy2480 30 TNEKAIALPVWTTLKSMGQTGIQDILTFNFSLVESVRQKLSEYPCLRIL 78 (337)
Q Consensus 30 ~~~kl~aLplW~alQ~Lg~~~I~~ri~~Af~ls~~l~~~L~~~~~I~il 78 (337)
...+.+++++|.+++++|.+++.+++++..++++.+.+.|++.++++++
T Consensus 357 ~~r~~~~l~~~~al~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~g~~~~ 405 (481)
T 4e1o_A 357 LSRRFRSVKLWFVIRSFGVKNLQAHVRHGTEMAKYFESLVRNDPSFEIP 405 (481)
T ss_dssp SCCCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTEECC
T ss_pred CCCCccHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Confidence 3345689999999999999999999999999999999999999999998
No 17
>3ffr_A Phosphoserine aminotransferase SERC; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP MSE P33; 1.75A {Cytophaga hutchinsonii atcc 33406}
Probab=94.92 E-value=0.21 Score=45.32 Aligned_cols=104 Identities=13% Similarity=0.034 Sum_probs=68.8
Q ss_pred HHHhhChhhHHHHHHHHHHHHHHHHHHHhhCCCeEEeecCCCCCCcceeeeccccCccccccccceeEEEEecCCCCCCC
Q psy2480 180 TLKSMGQTGIQDILTFNFSLVESIRQKLSEYPCLRILSHGPVSGLGLKEVTSQYLPVQTILESVQSCVVFQFVPKDAGWG 259 (337)
Q Consensus 180 ~Lq~LG~d~i~~~I~~t~~La~~~~e~L~~~p~LeiL~~~~waglg~v~~~~~~~~~~~~~~~~lsvVvFRy~P~~~~~e 259 (337)
+++.+..+++.+++++..++++.+.+.+++.|+++++...+ . .....++.|++.. +
T Consensus 255 al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~-----------------~--~~~~~~~~~~~~~---~-- 310 (362)
T 3ffr_A 255 VTGDMLQISADGIRKQTEEKAALINTYIESSKVFSFGVEDA-----------------K--LRSMTTIVANTTM---L-- 310 (362)
T ss_dssp HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCSSEEESSSCG-----------------G--GBCSSEEEEEESS---C--
T ss_pred HHHHHHHccHHHHHHHHHHHHHHHHHHHHHccCceeccCCh-----------------h--hcCCceEEEecCC---C--
Confidence 33334445577888888999999999999999999875111 0 1234567777632 2
Q ss_pred CCcchhhHHHHHHHHHHhhcCCCcceEEEEee--eCcEEEEEecCCCCChhHHHHHHHHHHHH
Q psy2480 260 PVPAYYDKLNSWLGQILQRDVPSVSLNLTETA--AFGTVLRICPFECSSGGDYESFLVCLDAQ 320 (337)
Q Consensus 260 ~~~~y~D~LNswLgqiL~~~~~~~~~~v~et~--~~G~~LRfcplnp~T~edI~~~v~~L~~~ 320 (337)
...+.+.|.+. ++.+.... .++.++|+|+-...+.+||+.+++.|++.
T Consensus 311 ---------~~~~~~~l~~~----gi~~~~g~~~~~~~~iRis~~~~~~~e~i~~l~~~l~~~ 360 (362)
T 3ffr_A 311 ---------PGEINKILEPF----DMAVGAGYGSKKETQIRIANFPAHSLEQVHKLVQTLKEK 360 (362)
T ss_dssp ---------HHHHHHHHGGG----TEEEEECSGGGTTTEEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred ---------HHHHHHHHHHC----CeEEecCccccCCCEEEEECCCCCCHHHHHHHHHHHHHH
Confidence 11233444443 25454322 24469999998877999999999999875
No 18
>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}
Probab=94.70 E-value=0.16 Score=46.43 Aligned_cols=105 Identities=14% Similarity=0.136 Sum_probs=74.9
Q ss_pred CcchhhHHHHhhChhhHHHHHHHHHHHHHHHHHHHhhCCCeEEeecCCCCCCcceeeeccccCccccccccceeEEEEec
Q psy2480 173 IALPVWTTLKSMGQTGIQDILTFNFSLVESIRQKLSEYPCLRILSHGPVSGLGLKEVTSQYLPVQTILESVQSCVVFQFV 252 (337)
Q Consensus 173 ~AL~lW~~Lq~LG~d~i~~~I~~t~~La~~~~e~L~~~p~LeiL~~~~waglg~v~~~~~~~~~~~~~~~~lsvVvFRy~ 252 (337)
..+..|.++..++.+++.+++++..+.++.+.+.|++. +++++. +...+.+.|++.
T Consensus 291 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~-----------------------~~~~~~~~~~~~ 346 (397)
T 3f9t_A 291 GGACTYAVLRYLGREGQRKIVNECMENTLYLYKKLKEN-NFKPVI-----------------------EPILNIVAIEDE 346 (397)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCCBSS-----------------------CCSSSEEEEECT
T ss_pred hHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHC-CCEEEc-----------------------CCCccEEEEEeC
Confidence 45677888888888888899999999999999999998 777665 355677788763
Q ss_pred CCCCCCCCCcchhhHHHHHHHHHHhhcCCCcceEEEEeeeCcEEEEEecCCCCChhHHHHHHHHHHHHH
Q psy2480 253 PKDAGWGPVPAYYDKLNSWLGQILQRDVPSVSLNLTETAAFGTVLRICPFECSSGGDYESFLVCLDAQV 321 (337)
Q Consensus 253 P~~~~~e~~~~y~D~LNswLgqiL~~~~~~~~~~v~et~~~G~~LRfcplnp~T~edI~~~v~~L~~~~ 321 (337)
+ . + .+.+.|.+.+ +.+.... ...++|+++-...|.+||+++++.|++.+
T Consensus 347 ~---~--------~----~~~~~l~~~g----i~v~~~~-~~~~~Ri~~~~~~~~e~i~~~~~~l~~~l 395 (397)
T 3f9t_A 347 D---Y--------K----EVCKKLRDRG----IYVSVCN-CVKALRIVVMPHIKREHIDNFIEILNSIK 395 (397)
T ss_dssp T---H--------H----HHHHHHHHTT----CBCEECS-SSSEEEEECCTTCCHHHHHHHHHHHHHHC
T ss_pred C---H--------H----HHHHHHHhCC----eEEeccC-CCCEEEEEEcCCCCHHHHHHHHHHHHHhh
Confidence 1 1 2 2333443331 3333222 23689999886668999999999998754
No 19
>2okj_A Glutamate decarboxylase 1; PLP-dependent decarboxylase, lyase; HET: LLP PLZ; 2.30A {Homo sapiens} PDB: 2okk_A*
Probab=94.54 E-value=0.03 Score=55.09 Aligned_cols=50 Identities=14% Similarity=0.270 Sum_probs=45.5
Q ss_pred HHHHhhchhhHHHHHhcCchhHHHHHHHHHHHHHHHHHhhccCCceEEee
Q psy2480 30 TNEKAIALPVWTTLKSMGQTGIQDILTFNFSLVESVRQKLSEYPCLRILS 79 (337)
Q Consensus 30 ~~~kl~aLplW~alQ~Lg~~~I~~ri~~Af~ls~~l~~~L~~~~~I~ils 79 (337)
...|.+++++|.+++++|.+++.+++++...+++.+.+.|++.+++++++
T Consensus 363 ~~rr~~~l~~~a~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~ 412 (504)
T 2okj_A 363 CGRHVDIFKFWLMWKAKGTVGFENQINKCLELAEYLYAKIKNREEFEMVF 412 (504)
T ss_dssp SSCBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEESS
T ss_pred CCCCccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEe
Confidence 33456799999999999999999999999999999999999999999983
No 20
>3nnk_A Ureidoglycine-glyoxylate aminotransferase; PLP-dependent; HET: LLP; 2.58A {Klebsiella pneumoniae}
Probab=94.42 E-value=0.27 Score=45.63 Aligned_cols=111 Identities=12% Similarity=0.126 Sum_probs=69.1
Q ss_pred HHHHhhChhhHHHHHHHHHHHHHHHHHHHhhCCCeEEeecCCCCCCcceeeeccccCccccccccceeEEEEecCCCCCC
Q psy2480 179 TTLKSMGQTGIQDILTFNFSLVESIRQKLSEYPCLRILSHGPVSGLGLKEVTSQYLPVQTILESVQSCVVFQFVPKDAGW 258 (337)
Q Consensus 179 ~~Lq~LG~d~i~~~I~~t~~La~~~~e~L~~~p~LeiL~~~~waglg~v~~~~~~~~~~~~~~~~lsvVvFRy~P~~~~~ 258 (337)
.+++.+..+++.+++++..++++.+.+.|++. ++++..... .....++.|++ |++.+
T Consensus 278 ~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~--------------------~~~~~~~~~~~-~~~~~- 334 (411)
T 3nnk_A 278 ECARLILQEGLDYGIARHKLHGDALVKGIQAM-GLETFGDLK--------------------HKMNNVLGVVI-PQGIN- 334 (411)
T ss_dssp HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCBCSCGG--------------------GBCSSEEEEEC-CTTCC-
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc-CCEeCCCcc--------------------cccccEEEEEC-CCCCC-
Confidence 34444455567788888899999999999986 666654100 12345677776 33322
Q ss_pred CCCcchhhHHHHHHHHHHhhcCCCcceEEEEee--eCcEEEEEecCCCC-ChhHHHHHHHHHHHHHhhhh
Q psy2480 259 GPVPAYYDKLNSWLGQILQRDVPSVSLNLTETA--AFGTVLRICPFECS-SGGDYESFLVCLDAQVYSGS 325 (337)
Q Consensus 259 e~~~~y~D~LNswLgqiL~~~~~~~~~~v~et~--~~G~~LRfcplnp~-T~edI~~~v~~L~~~~~il~ 325 (337)
.+++- +.|.+.. ++.+.... ..+.++|+++.... |.+||+++++.|++.+..+.
T Consensus 335 ------~~~l~----~~l~~~~---gi~v~~g~~~~~~~~iRi~~~~~~~~~~~i~~~~~~l~~~l~~~~ 391 (411)
T 3nnk_A 335 ------GDQAR----KLMLEDF---GIEIGTSFGPLHGKVWRIGTMGYNARKDCVMTTLSALEAVLNYLK 391 (411)
T ss_dssp ------HHHHH----HHHHHHH---SEEEEECCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHHHHHHTT
T ss_pred ------HHHHH----HHHHHhc---CeEEeCccCCCCCCEEEEeCccCcCCHHHHHHHHHHHHHHHHHcC
Confidence 12222 3333221 23343322 24469999986655 79999999999999887654
No 21
>3e77_A Phosphoserine aminotransferase; SERC, PLP, structural genomi structural genomics consortium, SGC, amino-acid biosynthesi aminotransferase; HET: PLP; 2.50A {Homo sapiens}
Probab=94.32 E-value=0.26 Score=47.77 Aligned_cols=102 Identities=8% Similarity=0.075 Sum_probs=63.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhCCCeEEeecCCCCCCcceeeeccccCccccccccce-eEEEEecCCCCCCCCCcchhh
Q psy2480 188 GIQDILTFNFSLVESIRQKLSEYPCLRILSHGPVSGLGLKEVTSQYLPVQTILESVQS-CVVFQFVPKDAGWGPVPAYYD 266 (337)
Q Consensus 188 ~i~~~I~~t~~La~~~~e~L~~~p~LeiL~~~~waglg~v~~~~~~~~~~~~~~~~ls-vVvFRy~P~~~~~e~~~~y~D 266 (337)
++-.+.++.-++++++.+.|++.|++++....+ +...+ +|.|++..-+.+ +.
T Consensus 270 G~~~i~~~~~~l~~~l~~~L~~~~g~~~~~~~~--------------------~~rs~~ivsf~~~~~~~~-----~~-- 322 (377)
T 3e77_A 270 GAAAMEKLSSIKSQTIYEIIDNSQGFYVCPVEP--------------------QNRSKMNIPFRIGNAKGD-----DA-- 322 (377)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTSTTSEECCSCG--------------------GGBCSSEEEEEESSTTCC-----HH--
T ss_pred CHHHHHHHHHHHHHHHHHHHHhcCCceecCCCH--------------------HHcCCcEEEEEcCCCCCc-----hh--
Confidence 566777888899999999999999988643101 23455 589998422111 11
Q ss_pred HHHHHHHHHHhhcCCCcceEEEEe-eeCcEEEEEecCCCCChhHHHHHHHHHHHHHh
Q psy2480 267 KLNSWLGQILQRDVPSVSLNLTET-AAFGTVLRICPFECSSGGDYESFLVCLDAQVY 322 (337)
Q Consensus 267 ~LNswLgqiL~~~~~~~~~~v~et-~~~G~~LRfcplnp~T~edI~~~v~~L~~~~~ 322 (337)
+..-+.+.+.+. ++.+... ...| .+|+++.+..|.+||+.+++.|++...
T Consensus 323 -~~~~~l~~l~~~----Gi~~~~g~~~~g-~iRiS~~~~~t~edId~l~~al~~~~~ 373 (377)
T 3e77_A 323 -LEKRFLDKALEL----NMLSLKGHRSVG-GIRASLYNAVTIEDVQKLAAFMKKFLE 373 (377)
T ss_dssp -HHHHHHHHHHHT----TEESCBCCTTTC-SEEEECCTTSCHHHHHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHC----CcEEeCCCCcCC-EEEEECCCCCCHHHHHHHHHHHHHHHH
Confidence 111122333221 1222111 1112 499999887799999999999998764
No 22
>2z67_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine biosynthesis, seven-stranded BETE-strand, PYR 5'-phosphate; HET: PLP; 2.50A {Methanococcus maripaludis} SCOP: c.67.1.9
Probab=94.16 E-value=0.11 Score=50.44 Aligned_cols=109 Identities=9% Similarity=-0.020 Sum_probs=73.9
Q ss_pred cchhhHHHHhhChhhHHHHHHHHHHHHHHHHHHHhhCC---CeEEeecCCCCCCcceeeeccccCccccccccceeEEEE
Q psy2480 174 ALPVWTTLKSMGQTGIQDILTFNFSLVESIRQKLSEYP---CLRILSHGPVSGLGLKEVTSQYLPVQTILESVQSCVVFQ 250 (337)
Q Consensus 174 AL~lW~~Lq~LG~d~i~~~I~~t~~La~~~~e~L~~~p---~LeiL~~~~waglg~v~~~~~~~~~~~~~~~~lsvVvFR 250 (337)
++..|.++..+|.+++.+++++..++++++.+.|++.+ +++++. +. +.|+|+
T Consensus 333 ~~~~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~v~~------------------------~~-~~v~~~ 387 (456)
T 2z67_A 333 VVNTLVSLLSMGSKNYLELVKNQKNSKKLLDELLNDLSKKTGGKFLD------------------------VE-SPIASC 387 (456)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCCBCC------------------------CC-CSSEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCEecC------------------------CC-CeEEEE
Confidence 77899999999999999999999999999999999986 765554 33 778888
Q ss_pred ecCCCCCCCCCcchhhHHHHHHHHHHhhcCCCcceEEE-------Ee---eeCcEEEEEecCCCCChhHHHHHHHHHHHH
Q psy2480 251 FVPKDAGWGPVPAYYDKLNSWLGQILQRDVPSVSLNLT-------ET---AAFGTVLRICPFECSSGGDYESFLVCLDAQ 320 (337)
Q Consensus 251 y~P~~~~~e~~~~y~D~LNswLgqiL~~~~~~~~~~v~-------et---~~~G~~LRfcplnp~T~edI~~~v~~L~~~ 320 (337)
+..++. .++ +.+.|.+.+-. ++-+. .. .....++|+|.---.|.+||+++++.|++.
T Consensus 388 ~~~~~~--------~~~----l~~~L~~~gi~-~~rv~~~~g~f~G~~~~~~~~~~vr~s~~~~~t~eeid~~l~~L~~~ 454 (456)
T 2z67_A 388 ISVNSD--------PVE----IAAKLYNLRVT-GPRGIKKTDHFGNCYLGTYTHDYIVMNAAIGVRTEDIVNSVSKLEKI 454 (456)
T ss_dssp EECSSC--------HHH----HHHHHHHTTEE-SCEEECTTCHHHHTCSSCCSCCEEEEECCTTCCHHHHHHHHHHHHTC
T ss_pred EecccH--------HHH----HHHHHHHcCCC-cceEEeecCccccccccccCcchhhhhhhcCCCHHHHHHHHHHHHHH
Confidence 742211 122 33444433210 12232 00 011247898866556899999999999763
No 23
>2jis_A Cysteine sulfinic acid decarboxylase; pyridoxal phosphate, alternative splicing, pyridoxal phosphate (PLP), structural genomics consortium (SGC); HET: PLP; 1.6A {Homo sapiens}
Probab=94.07 E-value=0.041 Score=54.47 Aligned_cols=50 Identities=16% Similarity=0.378 Sum_probs=46.3
Q ss_pred cHHHHhhchhhHHHHHhcCchhHHHHHHHHHHHHHHHHHhhccCCceEEe
Q psy2480 29 QTNEKAIALPVWTTLKSMGQTGIQDILTFNFSLVESVRQKLSEYPCLRIL 78 (337)
Q Consensus 29 ~~~~kl~aLplW~alQ~Lg~~~I~~ri~~Af~ls~~l~~~L~~~~~I~il 78 (337)
|...|.++|.+|.+++++|.+++.+++++...+++.+.+.|+++++++++
T Consensus 377 ~~~rr~~al~~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~g~~~~ 426 (515)
T 2jis_A 377 QCGRRVDCLKLWLMWKAQGDQGLERRIDQAFVLARYLVEEMKKREGFELV 426 (515)
T ss_dssp CSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEEES
T ss_pred CCCCcccHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEe
Confidence 44556789999999999999999999999999999999999999999998
No 24
>3e9k_A Kynureninase; kynurenine-L-hydrolase, kynurenine hydrolase, pyridoxal-5'-phosphate, inhibitor complex, 3-hydroxy hippur hydroxyhippuric acid, PLP; HET: PLP 3XH; 1.70A {Homo sapiens} PDB: 2hzp_A*
Probab=93.78 E-value=0.4 Score=46.15 Aligned_cols=110 Identities=15% Similarity=0.126 Sum_probs=70.1
Q ss_pred chhhHHHHhhChhhHHHHHHHHHHHHHHHHHHHhhC----------CCeEEeecCCCCCCcceeeeccccCccccccccc
Q psy2480 175 LPVWTTLKSMGQTGIQDILTFNFSLVESIRQKLSEY----------PCLRILSHGPVSGLGLKEVTSQYLPVQTILESVQ 244 (337)
Q Consensus 175 L~lW~~Lq~LG~d~i~~~I~~t~~La~~~~e~L~~~----------p~LeiL~~~~waglg~v~~~~~~~~~~~~~~~~l 244 (337)
..++.++..+...++-++.++..++++.+.+.|++. ++++++.+.+ .+...
T Consensus 340 ~a~~aal~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~p~~-------------------~~~~g 400 (465)
T 3e9k_A 340 CSLHASLEIFKQATMKALRKKSVLLTGYLEYLIKHNYGKDKAATKKPVVNIITPSH-------------------VEERG 400 (465)
T ss_dssp HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCC---------CEEECSCSS-------------------GGGBC
T ss_pred HHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhccccccccCCCCeEEeCCCC-------------------Hhhcc
Confidence 334555555555567788888889999999999886 7888886210 01235
Q ss_pred eeEEEEecCCCCCCCCCcchhhHHHHHHHHHHhhcCCCcceEEEEeeeCcEEEEEecCCCC-ChhHHHHHHHHHHHHHhh
Q psy2480 245 SCVVFQFVPKDAGWGPVPAYYDKLNSWLGQILQRDVPSVSLNLTETAAFGTVLRICPFECS-SGGDYESFLVCLDAQVYS 323 (337)
Q Consensus 245 svVvFRy~P~~~~~e~~~~y~D~LNswLgqiL~~~~~~~~~~v~et~~~G~~LRfcplnp~-T~edI~~~v~~L~~~~~i 323 (337)
+.|.|++. .+ . . .+.+.|.+. ++.+. ....-++||+|.... |.+||+++++.|++.++.
T Consensus 401 ~~~~~~~~-~~-~----~--------~l~~~L~~~----Gi~v~--~~~~~~iRis~~~~~~t~edi~~~~~~l~~~l~~ 460 (465)
T 3e9k_A 401 CQLTITFS-VP-N----K--------DVFQELEKR----GVVCD--KRNPNGIRVAPVPLYNSFHDVYKFTNLLTSILDS 460 (465)
T ss_dssp SCEEEEEC-CT-T----C--------CHHHHHHTT----TEECE--EETTTEEEEBCCTTTCCHHHHHHHHHHHHHHHTC
T ss_pred cEEEEEec-CC-H----H--------HHHHHHHHC----CEEEe--cCCCCEEEEeCcccCCCHHHHHHHHHHHHHHHHh
Confidence 67888874 21 1 1 122344332 13332 123469999997665 899999999999987654
No 25
>2qma_A Diaminobutyrate-pyruvate transaminase and L-2,4- diaminobutyrate decarboxylase; structural genomics, APC91511.1, glutamate decarboxylase; HET: MSE; 1.81A {Vibrio parahaemolyticus}
Probab=93.66 E-value=0.098 Score=51.31 Aligned_cols=47 Identities=17% Similarity=0.289 Sum_probs=44.2
Q ss_pred HHhhchhhHHHHHhcCchhHHHHHHHHHHHHHHHHHhhccCCceEEe
Q psy2480 32 EKAIALPVWTTLKSMGQTGIQDILTFNFSLVESVRQKLSEYPCLRIL 78 (337)
Q Consensus 32 ~kl~aLplW~alQ~Lg~~~I~~ri~~Af~ls~~l~~~L~~~~~I~il 78 (337)
.+.++|.+|.+++++|.+++.+++++...+.+.+.+.|++.++++++
T Consensus 373 r~~~al~~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~ 419 (497)
T 2qma_A 373 KRFDALKVFMTMQNVGPKALGDMYDHLLAQTLEVADMIRTNDQFELL 419 (497)
T ss_dssp CCCTHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHTCTTEEEC
T ss_pred CchhHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEE
Confidence 45689999999999999999999999999999999999999999987
No 26
>2yrr_A Aminotransferase, class V; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; HET: PLP; 1.86A {Thermus thermophilus} PDB: 2yri_A*
Probab=93.40 E-value=0.46 Score=42.74 Aligned_cols=105 Identities=16% Similarity=0.187 Sum_probs=65.2
Q ss_pred HHHhhChhhHHHHHHHHHHHHHHHHHHHhhCCCeEEeecCCCCCCcceeeeccccCccccccccceeEEEEecCCCCCCC
Q psy2480 180 TLKSMGQTGIQDILTFNFSLVESIRQKLSEYPCLRILSHGPVSGLGLKEVTSQYLPVQTILESVQSCVVFQFVPKDAGWG 259 (337)
Q Consensus 180 ~Lq~LG~d~i~~~I~~t~~La~~~~e~L~~~p~LeiL~~~~waglg~v~~~~~~~~~~~~~~~~lsvVvFRy~P~~~~~e 259 (337)
+|+.+..+++.++.++..+.++.+.+.|++. ++++... + .....++.|++ |.+.+
T Consensus 244 al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~-~--------------------~~~~~~~~~~~-~~~~~-- 298 (353)
T 2yrr_A 244 ALDLVLEEGVAARERRAREVYAWVLEELKAR-GFRPYPK-A--------------------SPLPTVLVVRP-PEGVD-- 298 (353)
T ss_dssp HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCEESCS-S--------------------SBCTTEEEEEC-CTTCC--
T ss_pred HHHHHHHhhHHHHHHHHHHHHHHHHHHHHHC-CCccccC-c--------------------cCCCeEEEEEC-CCCCC--
Confidence 3444444556778888889999999999987 8877641 0 01234456776 32222
Q ss_pred CCcchhhHHHHHHHHHHhhcCCCcceEEEEee--eCcEEEEEecCCCCChhHHH-HHHHHHHHHHh
Q psy2480 260 PVPAYYDKLNSWLGQILQRDVPSVSLNLTETA--AFGTVLRICPFECSSGGDYE-SFLVCLDAQVY 322 (337)
Q Consensus 260 ~~~~y~D~LNswLgqiL~~~~~~~~~~v~et~--~~G~~LRfcplnp~T~edI~-~~v~~L~~~~~ 322 (337)
.+ .+.+.|.+. ++.+.... ..+.++|+++....+.+|++ ++++.|++.+.
T Consensus 299 -----~~----~~~~~l~~~----gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~~~l~~~l~ 351 (353)
T 2yrr_A 299 -----AD----RLVRALYAE----GVAVAGGIGPTRGQVLRLGLMGEGARREAYQAFLKALDRALA 351 (353)
T ss_dssp -----HH----HHHHHHHHT----TEECEECCGGGTTTCEEEECSGGGSCHHHHHHHHHHHHHHHH
T ss_pred -----HH----HHHHHHHHC----CEEEeCCccccCCCeEEEecCccCCHHHHHHHHHHHHHHHHh
Confidence 12 233444332 24444333 23458999987667889998 99999987654
No 27
>1iug_A Putative aspartate aminotransferase; wild type, pyridoxal-5'-phosphate form, riken structural genomics/proteomics initiative, RSGI; HET: LLP; 2.20A {Thermus thermophilus} SCOP: c.67.1.3
Probab=93.34 E-value=0.92 Score=40.92 Aligned_cols=97 Identities=9% Similarity=0.039 Sum_probs=63.6
Q ss_pred HHHHHHHHHHHHHHHHHHHhhCCCeEEeecCCCCCCcceeeeccccCccccccccceeEEEEecCCCCCCCCCcchhhHH
Q psy2480 189 IQDILTFNFSLVESIRQKLSEYPCLRILSHGPVSGLGLKEVTSQYLPVQTILESVQSCVVFQFVPKDAGWGPVPAYYDKL 268 (337)
Q Consensus 189 i~~~I~~t~~La~~~~e~L~~~p~LeiL~~~~waglg~v~~~~~~~~~~~~~~~~lsvVvFRy~P~~~~~e~~~~y~D~L 268 (337)
+.++.++..+.++.+.+.|++. ++++... +.....+.|++. ++.+ .+
T Consensus 250 ~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~----------------------~~~~~~~~~~~~-~~~~-------~~-- 296 (352)
T 1iug_A 250 LEEHLALKAWQNALLYGVGEEG-GLRPVPK----------------------RFSPAVAAFYLP-EGVP-------YA-- 296 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHT-TCEESCS----------------------SBCTTCEEEECC-TTCC-------HH--
T ss_pred HHHHHHHHHHHHHHHHHHHHHC-CCccccc----------------------ccCCeEEEEEcC-CCCC-------HH--
Confidence 5677788888999999999987 8887651 013446677763 2221 11
Q ss_pred HHHHHHHHhhcCCCcceEEEEeee--CcEEEEEecCCCCChhHHHHHHHHHHHHHhhh
Q psy2480 269 NSWLGQILQRDVPSVSLNLTETAA--FGTVLRICPFECSSGGDYESFLVCLDAQVYSG 324 (337)
Q Consensus 269 NswLgqiL~~~~~~~~~~v~et~~--~G~~LRfcplnp~T~edI~~~v~~L~~~~~il 324 (337)
.+.+.|.+. ++.+..... .+.++|+++-...|.+|++++++.|++.+..+
T Consensus 297 --~~~~~l~~~----gi~v~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~ 348 (352)
T 1iug_A 297 --RVKEAFAQR----GAVIAGGQGPLKGKVFRLSLMGAYDRYEALGVAGMFREVLEEI 348 (352)
T ss_dssp --HHHHHHHTT----TEECEECCGGGTTTEEEECCCSSCCHHHHHHHHHHHHHHHHHH
T ss_pred --HHHHHHHHC----CEEEEeCCCccCCCEEEEEccccCCHHHHHHHHHHHHHHHHHh
Confidence 233444332 244443332 33589999987778999999999999877654
No 28
>3zrp_A Serine-pyruvate aminotransferase (AGXT); HET: PLP; 1.75A {Sulfolobus solfataricus} PDB: 3zrq_A* 3zrr_A*
Probab=93.27 E-value=0.78 Score=41.84 Aligned_cols=111 Identities=11% Similarity=0.104 Sum_probs=70.3
Q ss_pred HHHhhChhhHHHHHHHHHHHHHHHHHHHhhCCCeEEeecCCCCCCcceeeeccccCccccccccceeEEEEecCCCCCCC
Q psy2480 180 TLKSMGQTGIQDILTFNFSLVESIRQKLSEYPCLRILSHGPVSGLGLKEVTSQYLPVQTILESVQSCVVFQFVPKDAGWG 259 (337)
Q Consensus 180 ~Lq~LG~d~i~~~I~~t~~La~~~~e~L~~~p~LeiL~~~~waglg~v~~~~~~~~~~~~~~~~lsvVvFRy~P~~~~~e 259 (337)
++..+...++.++.++..++++.+.+.|++. ++++....+ . .....++.|++.. .+
T Consensus 255 al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~-----------------~--~~~~~~~~~~~~~--~~-- 310 (384)
T 3zrp_A 255 AFRLIEKEGIENRIKRHTMVASAIRAGLEAL-GLEIVARRP-----------------E--SYSNTVTGVILKV--AD-- 310 (384)
T ss_dssp HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCBSCSSG-----------------G--GBCSSEEEEECSS--SC--
T ss_pred HHHHHHhcCHHHHHHHHHHHHHHHHHHHHHC-CCeEccCcc-----------------c--ccCccEEEEECCC--CC--
Confidence 3444444557788888889999999999988 777665210 0 1124556677632 11
Q ss_pred CCcchhhHHHHHHHHHHhhcCCCcceEEEEeeeCc-EEEEEecCCCCChhHHHHHHHHHHHHHhhhhcc
Q psy2480 260 PVPAYYDKLNSWLGQILQRDVPSVSLNLTETAAFG-TVLRICPFECSSGGDYESFLVCLDAQVYSGSQG 327 (337)
Q Consensus 260 ~~~~y~D~LNswLgqiL~~~~~~~~~~v~et~~~G-~~LRfcplnp~T~edI~~~v~~L~~~~~il~~t 327 (337)
.+ .+.+.|.+. ++.+....... .++|+++....|.+||+++++.|++.+..+...
T Consensus 311 -----~~----~~~~~l~~~----gi~v~~g~~~~~~~iRi~~~~~~~~e~i~~~~~~l~~~l~~~~~~ 366 (384)
T 3zrp_A 311 -----PQ----KVLAGTVNE----GVEFAPGVHPAFKYFRIGHMGWVTPNDAIIAISVIERTLRKLGEP 366 (384)
T ss_dssp -----HH----HHHHHHHTT----TCCCEECCCTTCCEEEEECCSSCCHHHHHHHHHHHHHHHHHHTCC
T ss_pred -----HH----HHHHHHHHC----CEEEecCCCCCcCEEEEeccccCCHHHHHHHHHHHHHHHHHcCCC
Confidence 12 233444333 13333222111 689999888789999999999999998877644
No 29
>3isl_A Purine catabolism protein PUCG; pyridoxalphosphate, PLP dependent enzymes, purine metabolism transaminases, aminotransferases; HET: PLP; 2.06A {Bacillus subtilis}
Probab=93.21 E-value=0.39 Score=44.58 Aligned_cols=111 Identities=11% Similarity=0.169 Sum_probs=67.6
Q ss_pred HHHHhhChhhHHHHHHHHHHHHHHHHHHHhhCCCeEEeecCCCCCCcceeeeccccCccccccccceeEEEEecCCCCCC
Q psy2480 179 TTLKSMGQTGIQDILTFNFSLVESIRQKLSEYPCLRILSHGPVSGLGLKEVTSQYLPVQTILESVQSCVVFQFVPKDAGW 258 (337)
Q Consensus 179 ~~Lq~LG~d~i~~~I~~t~~La~~~~e~L~~~p~LeiL~~~~waglg~v~~~~~~~~~~~~~~~~lsvVvFRy~P~~~~~ 258 (337)
.++..+...++.++.++..++++.+.+.|++. ++++..... .....++.|++ |++.+
T Consensus 278 ~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~--------------------~~~~~~~~~~~-~~~~~- 334 (416)
T 3isl_A 278 EGVRLVLEEGLETRFERHRHHEAALAAGIKAM-GLRLFGDDS--------------------CKMPVVTCVEI-PGGID- 334 (416)
T ss_dssp HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCBCSCGG--------------------GBCTTEEEEEC-CTTCC-
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc-CCEeccCcc--------------------ccCCcEEEEeC-CCCCC-
Confidence 34444445557788888999999999999984 777664100 11245677776 33322
Q ss_pred CCCcchhhHHHHHHHHHHhhcCCCcceEEEEee--eCcEEEEEecCCCCChhH-HHHHHHHHHHHHhhhh
Q psy2480 259 GPVPAYYDKLNSWLGQILQRDVPSVSLNLTETA--AFGTVLRICPFECSSGGD-YESFLVCLDAQVYSGS 325 (337)
Q Consensus 259 e~~~~y~D~LNswLgqiL~~~~~~~~~~v~et~--~~G~~LRfcplnp~T~ed-I~~~v~~L~~~~~il~ 325 (337)
.++ +.+.|.+... +.+.... ..+.++|+++....+.+| |+++++.|++.++.+.
T Consensus 335 ------~~~----l~~~L~~~~g---i~v~~g~~~~~~~~iRi~~~~~~~~~e~i~~~~~~l~~~~~~~~ 391 (416)
T 3isl_A 335 ------GES----VRDMLLAQFG---IEIASSFGPLAGKIWRIGTMGYSCRKENVLFVLAGLEAVLLRHN 391 (416)
T ss_dssp ------HHH----HHHHHHHHHC---EECBCCCSTTTTTEEEEECCGGGCSHHHHHHHHHHHHHHHHHTT
T ss_pred ------HHH----HHHHHHHhCC---EEEecCCCCCCCCEEEEecccCCCcHHHHHHHHHHHHHHHHHcC
Confidence 122 2233322211 2232221 234699999966666555 9999999999887664
No 30
>2z9v_A Aspartate aminotransferase; pyridoxamine, pyruvate; HET: PXM; 1.70A {Mesorhizobium loti} PDB: 2z9u_A* 2z9w_A* 2z9x_A*
Probab=93.21 E-value=0.57 Score=43.19 Aligned_cols=111 Identities=11% Similarity=0.123 Sum_probs=66.2
Q ss_pred HHHhhChhhHHHHHHHHHHHHHHHHHHHhhCCCeEEeecCCCCCCcceeeeccccCccccccccceeEEEEecCCCCCCC
Q psy2480 180 TLKSMGQTGIQDILTFNFSLVESIRQKLSEYPCLRILSHGPVSGLGLKEVTSQYLPVQTILESVQSCVVFQFVPKDAGWG 259 (337)
Q Consensus 180 ~Lq~LG~d~i~~~I~~t~~La~~~~e~L~~~p~LeiL~~~~waglg~v~~~~~~~~~~~~~~~~lsvVvFRy~P~~~~~e 259 (337)
+|+.+...++.++.++..++++.+.+.|++. ++++..+ + .. ....+++.|++ |.+.+
T Consensus 259 al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~-~----------------~~--~~~~~~~~~~~-~~~~~-- 315 (392)
T 2z9v_A 259 ALDLYLNEGPEAVWARHALTAKAMRAGVTAM-GLSVWAA-S----------------DS--IASPTTTAVRT-PDGVD-- 315 (392)
T ss_dssp HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCBSSS-S----------------GG--GBCTTEEEEEC-CTTCC--
T ss_pred HHHHHHhccHHHHHHHHHHHHHHHHHHHHHc-CCeeccC-C----------------cc--ccCCceEEEEC-CCCCC--
Confidence 3333333346677788888899999999887 6665531 0 00 01345677776 32221
Q ss_pred CCcchhhHHHHHHHHHHhhcCCCcceEEEEee--eCcEEEEEecCC-CCChhHHHHHHHHHHHHHhhhh
Q psy2480 260 PVPAYYDKLNSWLGQILQRDVPSVSLNLTETA--AFGTVLRICPFE-CSSGGDYESFLVCLDAQVYSGS 325 (337)
Q Consensus 260 ~~~~y~D~LNswLgqiL~~~~~~~~~~v~et~--~~G~~LRfcpln-p~T~edI~~~v~~L~~~~~il~ 325 (337)
.++ +.+.|.+.. ++.+.... ..+.++|+|++. ..+.+||+++++.|++.+..+.
T Consensus 316 -----~~~----l~~~L~~~~---gi~v~~g~~~~~~~~lRi~~~~~~~~~~~i~~~~~~l~~~~~~~~ 372 (392)
T 2z9v_A 316 -----EKA----LRQAARARY---GVVFSSGRGETLGKLTRIGHMGPTAQPIYAIAALTALGGAMNAAG 372 (392)
T ss_dssp -----HHH----HHHHHHHHH---CEECEECCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHHHHHHTT
T ss_pred -----HHH----HHHHHHhcC---CEEEecCCCCCCCCeEEEeCcccccCHHHHHHHHHHHHHHHHHcC
Confidence 122 233333321 13343332 234689999877 4589999999999998877654
No 31
>2dr1_A PH1308 protein, 386AA long hypothetical serine aminotransferase; PLP, structural genomics, NPPSFA; HET: PLP; 1.90A {Pyrococcus horikoshii}
Probab=92.84 E-value=0.76 Score=42.03 Aligned_cols=100 Identities=13% Similarity=0.093 Sum_probs=63.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhCCCeEEeecCCCCCCcceeeeccccCccccccccceeEEEEecCCCCCCCCCcchhhH
Q psy2480 188 GIQDILTFNFSLVESIRQKLSEYPCLRILSHGPVSGLGLKEVTSQYLPVQTILESVQSCVVFQFVPKDAGWGPVPAYYDK 267 (337)
Q Consensus 188 ~i~~~I~~t~~La~~~~e~L~~~p~LeiL~~~~waglg~v~~~~~~~~~~~~~~~~lsvVvFRy~P~~~~~e~~~~y~D~ 267 (337)
++.++.++..+.++.+.+.|++. ++++..... .....++.|++. .+.+
T Consensus 278 ~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~--------------------~~~~~~~~~~~~-~~~~---------- 325 (386)
T 2dr1_A 278 GKEKWLEMYEKRAKMVREGVREI-GLDILAEPG--------------------HESPTITAVLTP-PGIK---------- 325 (386)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHT-TCCBSSCTT--------------------CBCSSEEEEECC-TTCC----------
T ss_pred CHHHHHHHHHHHHHHHHHHHHHc-CCeeCcCcc--------------------ccCCceEEEEcC-CCCC----------
Confidence 46677888888999999999887 776654100 012456677763 2211
Q ss_pred HHHHHHHHHhhcCCCcceEEEEeee--CcEEEEEecCCCCChhHHHHHHHHHHHHHhhh
Q psy2480 268 LNSWLGQILQRDVPSVSLNLTETAA--FGTVLRICPFECSSGGDYESFLVCLDAQVYSG 324 (337)
Q Consensus 268 LNswLgqiL~~~~~~~~~~v~et~~--~G~~LRfcplnp~T~edI~~~v~~L~~~~~il 324 (337)
...+.+.|.+. ++.+..... .+.++|+|+-...+.+|++++++.|++.+..+
T Consensus 326 -~~~~~~~l~~~----gi~v~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~ 379 (386)
T 2dr1_A 326 -GDEVYEAMRKR----GFELAKGYGSVKEKTFRIGHMGYMKFEDIQEMLDNLREVINEL 379 (386)
T ss_dssp -HHHHHHHHHHT----TEECEECCGGGTTTEEEEECCSSCCHHHHHHHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHC----CeEEecCccccCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHc
Confidence 11233444333 244443322 33589999988779999999999999887654
No 32
>1js3_A DDC;, DOPA decarboxylase; carbidopa, parkinson'S disease, vitamin; HET: PLP 142; 2.25A {Sus scrofa} SCOP: c.67.1.6 PDB: 1js6_A* 3rch_A* 3rbl_A 3rbf_A*
Probab=92.42 E-value=0.11 Score=50.58 Aligned_cols=47 Identities=15% Similarity=0.323 Sum_probs=44.1
Q ss_pred HHhhchhhHHHHHhcCchhHHHHHHHHHHHHHHHHHhhccCCceEEe
Q psy2480 32 EKAIALPVWTTLKSMGQTGIQDILTFNFSLVESVRQKLSEYPCLRIL 78 (337)
Q Consensus 32 ~kl~aLplW~alQ~Lg~~~I~~ri~~Af~ls~~l~~~L~~~~~I~il 78 (337)
.+.+++.+|.+++++|.+++.+++++..++.+.+.+.|+++++++++
T Consensus 355 rr~~~~~~~~al~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~ 401 (486)
T 1js3_A 355 RRFRSLKMWFVFRMYGVKGLQAYIRKHVQLSHEFEAFVLQDPRFEVC 401 (486)
T ss_dssp CCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTEEEC
T ss_pred CchhHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Confidence 35678999999999999999999999999999999999999999998
No 33
>1m32_A 2-aminoethylphosphonate-pyruvate aminotransferase; PLP-dependent aminotransferase fold; HET: PLP; 2.20A {Salmonella typhimurium} SCOP: c.67.1.3
Probab=92.32 E-value=1.3 Score=39.89 Aligned_cols=98 Identities=10% Similarity=0.060 Sum_probs=61.1
Q ss_pred HHHHHHHHHHHHHHHHHHHhhCCCeEEeecCCCCCCcceeeeccccCccccccccce-eEEEEecCC-CCCCCCCcchhh
Q psy2480 189 IQDILTFNFSLVESIRQKLSEYPCLRILSHGPVSGLGLKEVTSQYLPVQTILESVQS-CVVFQFVPK-DAGWGPVPAYYD 266 (337)
Q Consensus 189 i~~~I~~t~~La~~~~e~L~~~p~LeiL~~~~waglg~v~~~~~~~~~~~~~~~~ls-vVvFRy~P~-~~~~e~~~~y~D 266 (337)
+.++.++..+.++.+.+.|++. ++++.... +...+ .+.|++.+. +.+ .+
T Consensus 264 ~~~~~~~~~~~~~~l~~~L~~~-~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~-------~~ 314 (366)
T 1m32_A 264 VAARHQRYQQNQRSLVAGMRAL-GFNTLLDD---------------------ELHSPIITAFYSPEDPQYR-------FS 314 (366)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHT-TCCBSSCG---------------------GGBCSSEEEEECCCCTTCC-------HH
T ss_pred HhHHHHHHHHHHHHHHHHHHHC-CCeeccCc---------------------hhcCceEEEEEcCccCCCC-------HH
Confidence 5667778888899999999887 66655310 02234 677777321 111 12
Q ss_pred HHHHHHHHHHhhcCCCcceEEEEeee-CcEEEEEecCCCCChhHHHHHHHHHHHHHhh
Q psy2480 267 KLNSWLGQILQRDVPSVSLNLTETAA-FGTVLRICPFECSSGGDYESFLVCLDAQVYS 323 (337)
Q Consensus 267 ~LNswLgqiL~~~~~~~~~~v~et~~-~G~~LRfcplnp~T~edI~~~v~~L~~~~~i 323 (337)
.+.+.|.+. ++.+..... .+.++|+++-...+.+||+++++.|++.+..
T Consensus 315 ----~~~~~l~~~----gi~v~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~ 364 (366)
T 1m32_A 315 ----EFYRRLKEQ----GFVIYPGKVSQSDCFRIGNIGEVYAADITALLTAIRTAMYW 364 (366)
T ss_dssp ----HHHHHHHHT----TEECEECCCSSSCEEEEECCSSCCHHHHHHHHHHHHHHCTT
T ss_pred ----HHHHHHHHC----CEEEECCcCCCCCEEEEecCCCCCHHHHHHHHHHHHHHHHh
Confidence 233334332 244444333 3468999988777899999999999886543
No 34
>1t3i_A Probable cysteine desulfurase; PLP-binding enzyme, transferase; HET: 2OS PLP; 1.80A {Synechocystis SP} SCOP: c.67.1.3
Probab=92.08 E-value=1.3 Score=40.89 Aligned_cols=110 Identities=15% Similarity=0.260 Sum_probs=68.9
Q ss_pred HHhhChhhHHHHHHHHHHHHHHHHHHHhhCCCeEEeecCCCCCCcceeeeccccCccccccccceeEEEEecCCCCCCCC
Q psy2480 181 LKSMGQTGIQDILTFNFSLVESIRQKLSEYPCLRILSHGPVSGLGLKEVTSQYLPVQTILESVQSCVVFQFVPKDAGWGP 260 (337)
Q Consensus 181 Lq~LG~d~i~~~I~~t~~La~~~~e~L~~~p~LeiL~~~~waglg~v~~~~~~~~~~~~~~~~lsvVvFRy~P~~~~~e~ 260 (337)
++.+...++.++.++..+.++.+.+.|++.|+++++..... . ....+.+.|++ | +.+
T Consensus 295 l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~---------------~---~~~~~~~~~~~-~-~~~--- 351 (420)
T 1t3i_A 295 VDYLTDLGMENIHNYEVELTHYLWQGLGQIPQLRLYGPNPK---------------H---GDRAALASFNV-A-GLH--- 351 (420)
T ss_dssp HHHHHHHCHHHHHHHHHHHHHHHHHHHHTCTTEEEESCCGG---------------G---SCBCSEEEEEE-T-TBC---
T ss_pred HHHHHHhHHHHHHHHHHHHHHHHHHHHHhCCCeEEeCCCcc---------------c---cccCCEEEEEE-C-CCC---
Confidence 33344445667778888899999999999999998862100 0 01356777876 3 111
Q ss_pred CcchhhHHHHHHHHHHhhcCCCcceEEEEe--------ee-C-cEEEEEecCCCCChhHHHHHHHHHHHHHhhhh
Q psy2480 261 VPAYYDKLNSWLGQILQRDVPSVSLNLTET--------AA-F-GTVLRICPFECSSGGDYESFLVCLDAQVYSGS 325 (337)
Q Consensus 261 ~~~y~D~LNswLgqiL~~~~~~~~~~v~et--------~~-~-G~~LRfcplnp~T~edI~~~v~~L~~~~~il~ 325 (337)
.++ +.+.|.+. ++.+... .. + +.++|+++-...+.+|++.+++.|++.++.+.
T Consensus 352 ----~~~----~~~~l~~~----gi~v~~~~~~~~~~~~~~g~~~~iRis~~~~~~~~~i~~~~~~l~~~~~~~~ 414 (420)
T 1t3i_A 352 ----ASD----VATMVDQD----GIAIRSGHHCTQPLHRLFDASGSARASLYFYNTKEEIDLFLQSLQATIRFFS 414 (420)
T ss_dssp ----HHH----HHHHHHTT----TEECBCSCTTCHHHHHHTTCCCCEEEECCTTCCHHHHHHHHHHHHHHHHHTC
T ss_pred ----HHH----HHHHHHHC----CeEEeeccccchHHHHhcCCCCeEEEecCCCCCHHHHHHHHHHHHHHHHHhc
Confidence 011 22333322 2444332 11 2 45899998866699999999999998877653
No 35
>1wyu_B Glycine dehydrogenase subunit 2 (P-protein); alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_B* 1wyv_B*
Probab=92.06 E-value=0.55 Score=45.80 Aligned_cols=111 Identities=15% Similarity=0.165 Sum_probs=69.6
Q ss_pred cchhhHHHHhhChhhHHHHHHHHHHHHHHHHHHHhhCCCeEEeecCCCCCCcceeeeccccCccccccccceeEEEEecC
Q psy2480 174 ALPVWTTLKSMGQTGIQDILTFNFSLVESIRQKLSEYPCLRILSHGPVSGLGLKEVTSQYLPVQTILESVQSCVVFQFVP 253 (337)
Q Consensus 174 AL~lW~~Lq~LG~d~i~~~I~~t~~La~~~~e~L~~~p~LeiL~~~~waglg~v~~~~~~~~~~~~~~~~lsvVvFRy~P 253 (337)
....|..++.+|.+++.++.++..+.++++.+.|++. +++++.. .......++++ +
T Consensus 327 ~~aa~~~l~~~g~~~l~~~~~~~~~~~~~l~~~L~~~-g~~~~~~----------------------~~~~~~~~~~~-~ 382 (474)
T 1wyu_B 327 LVRAWAYIRTLGLEGLKKAAALAVLNARYLKELLKEK-GYRVPYD----------------------GPSMHEFVAQP-P 382 (474)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCBCSSC----------------------SSCCSCEEEBC-S
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CcEecCC----------------------CCcceEEEEEc-C
Confidence 3445777777899999999999999999999999987 7766321 01111123344 3
Q ss_pred CCCCCCCCcchhhHHHHHHHHHHhhcCCCcceEEEEeee---CcEEEEEecCCCCChhHHHHHHHHHHHHHhh
Q psy2480 254 KDAGWGPVPAYYDKLNSWLGQILQRDVPSVSLNLTETAA---FGTVLRICPFECSSGGDYESFLVCLDAQVYS 323 (337)
Q Consensus 254 ~~~~~e~~~~y~D~LNswLgqiL~~~~~~~~~~v~et~~---~G~~LRfcplnp~T~edI~~~v~~L~~~~~i 323 (337)
.+.+ .+++. +.|.+.+ +.+-.... .+-++|+|+-...|.+||+++++.|++.+..
T Consensus 383 ~~~~-------~~~l~----~~L~~~G----i~~~~~~~~~~~~~~lRis~~~~~t~e~id~~~~~L~~~~~~ 440 (474)
T 1wyu_B 383 EGFR-------ALDLA----KGLLELG----FHPPTVYFPLIVKEALMVEPTETEAKETLEAFAEAMGALLKK 440 (474)
T ss_dssp TTCC-------HHHHH----HHHHHTT----CCCCEESCSTTSTTCEEECCCTTSCHHHHHHHHHHHHHHHTS
T ss_pred CCCC-------HHHHH----HHHHHCC----ccccccccccccCCEEEEEeecCCCHHHHHHHHHHHHHHHHh
Confidence 2221 12333 3332221 11111111 1358999998777999999999999987765
No 36
>3f0h_A Aminotransferase; RER070207000802, structural genomics, JOIN for structural genomics, JCSG; HET: MSE LLP; 1.70A {Eubacterium rectale}
Probab=92.04 E-value=1 Score=41.22 Aligned_cols=103 Identities=14% Similarity=0.177 Sum_probs=61.9
Q ss_pred HHhhChh-hHHHHHHHHHHHHHHHHHHHhhCCCeEEeecCCCCCCcceeeeccccCccccccccceeEEEEecCCCCCCC
Q psy2480 181 LKSMGQT-GIQDILTFNFSLVESIRQKLSEYPCLRILSHGPVSGLGLKEVTSQYLPVQTILESVQSCVVFQFVPKDAGWG 259 (337)
Q Consensus 181 Lq~LG~d-~i~~~I~~t~~La~~~~e~L~~~p~LeiL~~~~waglg~v~~~~~~~~~~~~~~~~lsvVvFRy~P~~~~~e 259 (337)
+..+..+ ++.++.++..++++.+.+.+++.+ +++... .....+++|. |++.+
T Consensus 267 l~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~-~~~~~~----------------------~~~~~~~~~~--~~~~~-- 319 (376)
T 3f0h_A 267 LKEIKKHGGADAEVARIASQAADFRAKIKDLP-FELVSE----------------------SPANGVTSVH--PTTAN-- 319 (376)
T ss_dssp HHHHHHTTHHHHHHHHHHHHHHHHHHHTTTSS-EEECCS----------------------SBBTTEEEEE--ESSSC--
T ss_pred HHHHHHhcCHHHHHHHHHHHHHHHHHHHHHcC-CccCcc----------------------ccCceEEEEe--CCCCC--
Confidence 3333334 467778888889999999988863 665541 1112233333 33322
Q ss_pred CCcchhhHHHHHHHHHHhhcCCCcceEEEEee--eCcEEEEEecCCCCChhHHHHHHHHHHHHHh
Q psy2480 260 PVPAYYDKLNSWLGQILQRDVPSVSLNLTETA--AFGTVLRICPFECSSGGDYESFLVCLDAQVY 322 (337)
Q Consensus 260 ~~~~y~D~LNswLgqiL~~~~~~~~~~v~et~--~~G~~LRfcplnp~T~edI~~~v~~L~~~~~ 322 (337)
.+ .+.+.|.+.+. +.+.... ..+.++|+++-...|.+||+++++.|++.++
T Consensus 320 -----~~----~l~~~l~~~~g---i~v~~g~~~~~~~~lRis~~~~~t~e~i~~~~~~l~~~l~ 372 (376)
T 3f0h_A 320 -----AY----DIFLKLKDEYG---IWICPNGGEMKDTIFRVGHIGALTHEDNTTLVNAFKDLQK 372 (376)
T ss_dssp -----HH----HHHHHHHHHSS---EECEECCGGGTTTCEEEECCSSCCHHHHHHHHHHHHHHHH
T ss_pred -----HH----HHHHHHHHhCC---EEEecCccccCCCEEEEecCCCCCHHHHHHHHHHHHHHHH
Confidence 12 23344444322 3343321 2446999999877899999999999988764
No 37
>1kmj_A Selenocysteine lyase; persulfide perselenide NIFS pyridoxal phosphate, structural PSI, protein structure initiative; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.3 PDB: 1i29_A* 1jf9_A* 1kmk_A* 1c0n_A*
Probab=92.03 E-value=2.7 Score=38.46 Aligned_cols=98 Identities=11% Similarity=0.139 Sum_probs=63.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhCCCeEEeecCCCCCCcceeeeccccCccccccccceeEEEEecCCCCCCCCCcchhhH
Q psy2480 188 GIQDILTFNFSLVESIRQKLSEYPCLRILSHGPVSGLGLKEVTSQYLPVQTILESVQSCVVFQFVPKDAGWGPVPAYYDK 267 (337)
Q Consensus 188 ~i~~~I~~t~~La~~~~e~L~~~p~LeiL~~~~waglg~v~~~~~~~~~~~~~~~~lsvVvFRy~P~~~~~e~~~~y~D~ 267 (337)
++.++.++.-++++.+.+.|++.|+++++.. +...+.+.|++ | +.+ . +
T Consensus 298 ~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~----------------------~~~~~~~~~~~-~-~~~----~---~- 345 (406)
T 1kmj_A 298 GLNNIAEYEQNLMHYALSQLESVPDLTLYGP----------------------QNRLGVIAFNL-G-KHH----A---Y- 345 (406)
T ss_dssp CHHHHHHHHHHHHHHHHHHHTTSTTEEEESC----------------------TTCCSEEEEEE-T-TCC----H---H-
T ss_pred CHHHHHHHHHHHHHHHHHHHhcCCCeEEecC----------------------CCcCCEEEEEE-C-CCC----H---H-
Confidence 4456667777899999999999999988751 01356677775 2 211 0 1
Q ss_pred HHHHHHHHHhhcCCCcceEEEEee---------eC-cEEEEEecCCCCChhHHHHHHHHHHHHHhhh
Q psy2480 268 LNSWLGQILQRDVPSVSLNLTETA---------AF-GTVLRICPFECSSGGDYESFLVCLDAQVYSG 324 (337)
Q Consensus 268 LNswLgqiL~~~~~~~~~~v~et~---------~~-G~~LRfcplnp~T~edI~~~v~~L~~~~~il 324 (337)
.+.+.|.+. ++.+.... .+ ..++|+++-...|.+|++.+++.|++.++.+
T Consensus 346 ---~~~~~l~~~----gi~v~~g~~~~~~~~~~~g~~~~iRis~~~~~t~~~i~~~~~~l~~~~~~l 405 (406)
T 1kmj_A 346 ---DVGSFLDNY----GIAVRTGHHCAMPLMAYYNVPAMCRASLAMYNTHEEVDRLVTGLQRIHRLL 405 (406)
T ss_dssp ---HHHHHHHHT----TEECEEECTTCHHHHHHTTCSCEEEEECCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred ---HHHHHHhhC----CcEEEeccccchHHHHhcCCCCeEEEEeecCCCHHHHHHHHHHHHHHHHhh
Confidence 122333322 24444322 11 2589999987779999999999999877653
No 38
>2dgk_A GAD-beta, GADB, glutamate decarboxylase beta; gadbd1-14, autoinhibition, substituted aldamine, lyase; HET: PLP; 1.90A {Escherichia coli} PDB: 2dgm_A* 1pmo_A* 2dgl_A* 1pmm_A* 3fz6_A* 3fz7_A 3fz8_A* 1xey_A*
Probab=91.57 E-value=0.26 Score=47.42 Aligned_cols=45 Identities=4% Similarity=0.244 Sum_probs=42.3
Q ss_pred hchhhHHHHHhcCchhHHHHHHHHHHHHHHHHHhhccCCceEEee
Q psy2480 35 IALPVWTTLKSMGQTGIQDILTFNFSLVESVRQKLSEYPCLRILS 79 (337)
Q Consensus 35 ~aLplW~alQ~Lg~~~I~~ri~~Af~ls~~l~~~L~~~~~I~ils 79 (337)
.++.+|.++++||.+++.+++++...+.+.+.+.|+++++++++.
T Consensus 309 ~~~~~~aal~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~ 353 (452)
T 2dgk_A 309 QVIAQYYEFLRLGREGYTKVQNASYQVAAYLADEIAKLGPYEFIC 353 (452)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSEEEEE
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEec
Confidence 578899999999999999999999999999999999999999983
No 39
>1elu_A L-cysteine/L-cystine C-S lyase; FES cluster biosynthesis, pyridoxal 5'-phosphate, thiocystei aminoacrylate, enzyme-product complex; HET: PDA; 1.55A {Synechocystis SP} SCOP: c.67.1.3 PDB: 1elq_A* 1n2t_A* 1n31_A*
Probab=91.34 E-value=1.6 Score=39.91 Aligned_cols=94 Identities=16% Similarity=0.157 Sum_probs=61.1
Q ss_pred HHHHHHHHHHHHHHHHHHHhhCCCeEEeecCCCCCCcceeeeccccCccccccccceeEEEEecCCCCCCCCCcchhhHH
Q psy2480 189 IQDILTFNFSLVESIRQKLSEYPCLRILSHGPVSGLGLKEVTSQYLPVQTILESVQSCVVFQFVPKDAGWGPVPAYYDKL 268 (337)
Q Consensus 189 i~~~I~~t~~La~~~~e~L~~~p~LeiL~~~~waglg~v~~~~~~~~~~~~~~~~lsvVvFRy~P~~~~~e~~~~y~D~L 268 (337)
+.++.++..+.++.+.+.|++.|+++++.+. +...+.+.|++. .+.+ .+
T Consensus 295 ~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~---------------------~~~~~~~~~~~~-~~~~-------~~-- 343 (390)
T 1elu_A 295 AEERYQAICQRSEFLWRGLNQLPHVHCLATS---------------------APQAGLVSFTVD-SPLG-------HR-- 343 (390)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSTTEEESCSS---------------------CCSSSEEEEEEC-SSSC-------HH--
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCcEEecCc---------------------cccccEEEEEcC-CCCC-------HH--
Confidence 6677888889999999999999999887510 134567777763 2221 11
Q ss_pred HHHHHHHHhhcCCCcceEEEEeeeCcEEEEEecCCCCChhHHHHHHHHHHHH
Q psy2480 269 NSWLGQILQRDVPSVSLNLTETAAFGTVLRICPFECSSGGDYESFLVCLDAQ 320 (337)
Q Consensus 269 NswLgqiL~~~~~~~~~~v~et~~~G~~LRfcplnp~T~edI~~~v~~L~~~ 320 (337)
.+.+.|.+. ++.+.... ...++|+|+--..+.+|++++++.|++.
T Consensus 344 --~~~~~l~~~----gi~v~~~~-~~~~iRis~~~~~~~~~i~~~~~~l~~~ 388 (390)
T 1elu_A 344 --AIVQKLEEQ----RIYLRTIA-DPDCIRACCHYITDEEEINHLLARLADF 388 (390)
T ss_dssp --HHHHHHHHT----TEECEEET-TTTEEEEECCTTCCHHHHHHHHHHHTTC
T ss_pred --HHHHHHHHC----CEEEEecC-CCCeEEEecccCCCHHHHHHHHHHHHhh
Confidence 233444322 24444332 2358999984445899999999998753
No 40
>4hvk_A Probable cysteine desulfurase 2; transferase and ISCS, transferase; HET: PMP PG4; 1.43A {Archaeoglobus fulgidus} PDB: 4eb7_A* 4eb5_A*
Probab=91.30 E-value=2.4 Score=38.34 Aligned_cols=104 Identities=10% Similarity=0.001 Sum_probs=66.6
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhhCCCeEEeecCCCCCCcceeeeccccCccccccccceeEEEEecCCCCCCCCCcchh
Q psy2480 186 QTGIQDILTFNFSLVESIRQKLSEYPCLRILSHGPVSGLGLKEVTSQYLPVQTILESVQSCVVFQFVPKDAGWGPVPAYY 265 (337)
Q Consensus 186 ~d~i~~~I~~t~~La~~~~e~L~~~p~LeiL~~~~waglg~v~~~~~~~~~~~~~~~~lsvVvFRy~P~~~~~e~~~~y~ 265 (337)
.+.+.++.++..+.++.+.+.|++.|++++..... ......+.|++. +.+ .
T Consensus 251 ~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~--------------------~~~~~~~~~~~~--~~~-------~ 301 (382)
T 4hvk_A 251 AMEWREEAERLRRLRDRIIDNVLKIEESYLNGHPE--------------------KRLPNNVNVRFS--YIE-------G 301 (382)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTSTTEEECSCSS--------------------SBCTTEEEEEET--TCC-------H
T ss_pred HhhHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCcc--------------------ccCCCEEEEEEC--CCC-------H
Confidence 45677888899999999999999999998875210 111246777773 211 1
Q ss_pred hHHHHHHHHHHhhcCCCcceEEEEee---------------e------CcEEEEEecCCCCChhHHHHHHHHHHHHHhhh
Q psy2480 266 DKLNSWLGQILQRDVPSVSLNLTETA---------------A------FGTVLRICPFECSSGGDYESFLVCLDAQVYSG 324 (337)
Q Consensus 266 D~LNswLgqiL~~~~~~~~~~v~et~---------------~------~G~~LRfcplnp~T~edI~~~v~~L~~~~~il 324 (337)
+++- +.|.+.+ +.+.... . ...++|+++-...|.+|++.+++.|++.+..+
T Consensus 302 ~~~~----~~l~~~g----i~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRl~~~~~~t~e~i~~~~~~l~~~~~~~ 373 (382)
T 4hvk_A 302 ESIV----LSLDMAG----IQASTGSACSSKTLQPSHVLMACGLKHEEAHGTLLLTLGRYNTDEDVDRLLEVLPGVIERL 373 (382)
T ss_dssp HHHH----HHHHHTT----CBCBCC--------CCCHHHHHTTCCHHHHHTEEEEECCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHH----HHHHHCC----EEEeeCCccCCCCCcchHHHHHcCCChhhcCCeEEEEcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 2222 2332221 1121110 0 03589999877779999999999999988766
Q ss_pred hc
Q psy2480 325 SQ 326 (337)
Q Consensus 325 ~~ 326 (337)
..
T Consensus 374 ~~ 375 (382)
T 4hvk_A 374 RS 375 (382)
T ss_dssp HH
T ss_pred Hh
Confidence 54
No 41
>3kgw_A Alanine-glyoxylate aminotransferase; AAH25799.1, putative aminotransferase, structural genomics, center for structural genomics, JCSG; HET: PLP; 1.65A {Mus musculus} SCOP: c.67.1.3 PDB: 3kgx_A 3imz_A* 3r9a_A* 1h0c_A* 1j04_A*
Probab=91.27 E-value=0.92 Score=41.49 Aligned_cols=109 Identities=12% Similarity=0.201 Sum_probs=65.8
Q ss_pred HHhhChhhHHHHHHHHHHHHHHHHHHHhhCCCeEEeecCCCCCCcceeeeccccCccccccccc-eeEEEEecCCCCCCC
Q psy2480 181 LKSMGQTGIQDILTFNFSLVESIRQKLSEYPCLRILSHGPVSGLGLKEVTSQYLPVQTILESVQ-SCVVFQFVPKDAGWG 259 (337)
Q Consensus 181 Lq~LG~d~i~~~I~~t~~La~~~~e~L~~~p~LeiL~~~~waglg~v~~~~~~~~~~~~~~~~l-svVvFRy~P~~~~~e 259 (337)
+..+..+++.++.++..+.++.+.+.+++. ++++....+ .... .++.|++ |.+.+
T Consensus 277 l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~--------------------~~~~~~~~~~~~-~~~~~-- 332 (393)
T 3kgw_A 277 LALIAEQGLENCWRRHREATAHLHKHLQEM-GLKFFVKDP--------------------EIRLPTITTVTV-PAGYN-- 332 (393)
T ss_dssp HHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCBSSSSG--------------------GGBCSSEEEEEC-CTTBC--
T ss_pred HHHHHHhhHHHHHHHHHHHHHHHHHHHHHc-CCeeccCCh--------------------hhcCCeEEEEeC-CCCCC--
Confidence 333444567788888899999999999988 676653100 1122 3445665 33222
Q ss_pred CCcchhhHHHHHHHHHHhhcCCCcceEEEEee--eCcEEEEEecCCCC-ChhHHHHHHHHHHHHHhhhh
Q psy2480 260 PVPAYYDKLNSWLGQILQRDVPSVSLNLTETA--AFGTVLRICPFECS-SGGDYESFLVCLDAQVYSGS 325 (337)
Q Consensus 260 ~~~~y~D~LNswLgqiL~~~~~~~~~~v~et~--~~G~~LRfcplnp~-T~edI~~~v~~L~~~~~il~ 325 (337)
.+++- +.|.+... +.+.... ..+.++|+++.... |.+|++++++.|++.++.+.
T Consensus 333 -----~~~~~----~~l~~~~g---i~v~~g~~~~~~~~iRi~~~~~~~~~~~i~~~~~~l~~~l~~~~ 389 (393)
T 3kgw_A 333 -----WRDIV----SYVLDHFS---IEISGGLGPTEERVLRIGLLGYNATTENVDRVAEALREALQHCP 389 (393)
T ss_dssp -----HHHHH----HHHHHHHC---EECBCCCGGGTTTEEEEECCGGGCCHHHHHHHHHHHHHHHHHSC
T ss_pred -----HHHHH----HHHHHhCC---EEEeCCcccCCCCEEEEEecccCCCHHHHHHHHHHHHHHHHhhh
Confidence 12222 33332211 3333222 24469999985554 89999999999999887654
No 42
>3lvm_A Cysteine desulfurase; structural genomics, montreal-kingston bacterial structural genomics initiative, BSGI, transferase; HET: PLP; 2.05A {Escherichia coli} PDB: 3lvk_A* 3lvl_B* 3lvj_A* 1p3w_B*
Probab=90.85 E-value=3 Score=38.81 Aligned_cols=100 Identities=6% Similarity=-0.016 Sum_probs=64.5
Q ss_pred HHHHHHHHHHHHHHHHHHHhhCCCeEEeecCCCCCCcceeeeccccCccccccccceeEEEEecCCCCCCCCCcchhhHH
Q psy2480 189 IQDILTFNFSLVESIRQKLSEYPCLRILSHGPVSGLGLKEVTSQYLPVQTILESVQSCVVFQFVPKDAGWGPVPAYYDKL 268 (337)
Q Consensus 189 i~~~I~~t~~La~~~~e~L~~~p~LeiL~~~~waglg~v~~~~~~~~~~~~~~~~lsvVvFRy~P~~~~~e~~~~y~D~L 268 (337)
+.+++++..++++.+.+.|++.|++++..... ......+.|++. +.+ .+.+
T Consensus 282 ~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~--------------------~~~~~~~~~~~~--~~~-------~~~l 332 (423)
T 3lvm_A 282 MATEMERLRGLRNRLWNGIKDIEEVYLNGDLE--------------------HGAPNILNVSFN--YVE-------GESL 332 (423)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTSTTEEEESCST--------------------TBCTTEEEEEET--TSC-------HHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCEEEeCCcc--------------------ccCCCeEEEEeC--CCC-------HHHH
Confidence 56778888899999999999999999886211 112346777772 211 0122
Q ss_pred HHHHHHHHhhcCCCcceEEEEee---------------------eCcEEEEEecCCCCChhHHHHHHHHHHHHHhhhhcc
Q psy2480 269 NSWLGQILQRDVPSVSLNLTETA---------------------AFGTVLRICPFECSSGGDYESFLVCLDAQVYSGSQG 327 (337)
Q Consensus 269 NswLgqiL~~~~~~~~~~v~et~---------------------~~G~~LRfcplnp~T~edI~~~v~~L~~~~~il~~t 327 (337)
.+.|.+ +.+.... ..+.++|+++-...|.+||+.+++.|++.+..+...
T Consensus 333 ----~~~l~~------i~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~t~e~i~~~~~~l~~~~~~~~~~ 402 (423)
T 3lvm_A 333 ----IMALKD------LAVSSGSACTSASLEPSYVLRALGLNDELAHSSIRFSLGRFTTEEEIDYTIELVRKSIGRLRDL 402 (423)
T ss_dssp ----HHHTTT------EECBCCCC-----CCCCHHHHHHTCCHHHHHTEEEEECCTTCCHHHHHHHHHHHHHHHHHHHTS
T ss_pred ----HHHHhh------heeccCccccCCCccccHHHHHhCCCccccCceEEEECCCCCCHHHHHHHHHHHHHHHHHhhcc
Confidence 222322 1111100 013589999876668999999999999988877653
No 43
>1vjo_A Alanine--glyoxylate aminotransferase; 17130350, ALR1004, STR genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: PLP; 1.70A {Nostoc SP} SCOP: c.67.1.3
Probab=90.85 E-value=1.2 Score=41.04 Aligned_cols=105 Identities=12% Similarity=0.197 Sum_probs=61.6
Q ss_pred HHhhChhhHHHHHHHHHHHHHHHHHHHhhCCCeEEeecCCCCCCcceeeeccccCccccccccceeEEEEecCCCCCCCC
Q psy2480 181 LKSMGQTGIQDILTFNFSLVESIRQKLSEYPCLRILSHGPVSGLGLKEVTSQYLPVQTILESVQSCVVFQFVPKDAGWGP 260 (337)
Q Consensus 181 Lq~LG~d~i~~~I~~t~~La~~~~e~L~~~p~LeiL~~~~waglg~v~~~~~~~~~~~~~~~~lsvVvFRy~P~~~~~e~ 260 (337)
|+.+..+++.++.++..+.++.+.+.|++. ++++..+ + . + ...+++.|++ |.+.+
T Consensus 285 l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~-~-----------------~-~-~~~~~~~~~~-~~~~~--- 339 (393)
T 1vjo_A 285 LRLIAQEGLANCWQRHQKNVEYLWERLEDI-GLSLHVE-K-----------------E-Y-RLPTLTTVCI-PDGVD--- 339 (393)
T ss_dssp HHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCBSSC-G-----------------G-G-BCSSEEEEEC-CTTCC---
T ss_pred HHHHHHccHHHHHHHHHHHHHHHHHHHHHc-CCcccCC-c-----------------c-c-cCCcEEEEEc-CCCCC---
Confidence 333333456677888888999999999887 6766541 0 0 0 1235677776 33322
Q ss_pred CcchhhHHHHHHHHHHhhcCCCcceEEEEeee--CcEEEEEecCCCC-ChhHHHHHHHHHHHHH
Q psy2480 261 VPAYYDKLNSWLGQILQRDVPSVSLNLTETAA--FGTVLRICPFECS-SGGDYESFLVCLDAQV 321 (337)
Q Consensus 261 ~~~y~D~LNswLgqiL~~~~~~~~~~v~et~~--~G~~LRfcplnp~-T~edI~~~v~~L~~~~ 321 (337)
.+ .+.+.|.+.. ++.+..... .+.++|+|+.... +.++++++++.|++.+
T Consensus 340 ----~~----~~~~~l~~~~---gi~v~~g~~~~~~~~iRis~~~~~~~~~~i~~~~~~l~~~l 392 (393)
T 1vjo_A 340 ----GK----AVARRLLNEH---NIEVGGGLGELAGKVWRVGLMGFNSRKESVDQLIPALEQVL 392 (393)
T ss_dssp ----HH----HHHHHHHHHH---CEECEECCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHHHH
T ss_pred ----HH----HHHHHHHhhC---CEEEecCccccCCCEEEEeCCccCChHHHHHHHHHHHHHHh
Confidence 11 2233333321 134443332 3458999976554 5778999999998754
No 44
>3m5u_A Phosphoserine aminotransferase; alpha-beta half sandwich, csgid, amino-acid biosynthesis, cytoplasm, pyridoxal phosphate; HET: MES; 2.15A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=90.54 E-value=1.1 Score=43.01 Aligned_cols=98 Identities=7% Similarity=0.043 Sum_probs=61.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhCCCe-EEeecCCCCCCcceeeeccccCcccccccc-ceeEEEEecCCCCCCCCCcchh
Q psy2480 188 GIQDILTFNFSLVESIRQKLSEYPCL-RILSHGPVSGLGLKEVTSQYLPVQTILESV-QSCVVFQFVPKDAGWGPVPAYY 265 (337)
Q Consensus 188 ~i~~~I~~t~~La~~~~e~L~~~p~L-eiL~~~~waglg~v~~~~~~~~~~~~~~~~-lsvVvFRy~P~~~~~e~~~~y~ 265 (337)
++-.+.++..++++++.+.|++.+++ ++... + +.. ..+|.|.+. .... .
T Consensus 258 G~~~i~~~~~~l~~~l~~~L~~~~g~~~~~~~-~--------------------~~rs~~ivsf~~~-~~~~-------~ 308 (361)
T 3m5u_A 258 GLDKVHEKNSQKATMLYECIDLSNGFYKGHAD-K--------------------KDRSLMNVSFNIA-KNKD-------L 308 (361)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTSTTSEEESSC-G--------------------GGBCSSEEEEEES-SCTT-------H
T ss_pred CHHHHHHHHHHHHHHHHHHHHHCCCeeeccCC-H--------------------HHcCCeEEEEECC-Cchh-------h
Confidence 46677788889999999999999976 54321 0 122 358899883 2111 1
Q ss_pred hHHHHHHHHHHhhcCCCcceEEEEee-eCcEEEEEecCCCCChhHHHHHHHHHHHHHh
Q psy2480 266 DKLNSWLGQILQRDVPSVSLNLTETA-AFGTVLRICPFECSSGGDYESFLVCLDAQVY 322 (337)
Q Consensus 266 D~LNswLgqiL~~~~~~~~~~v~et~-~~G~~LRfcplnp~T~edI~~~v~~L~~~~~ 322 (337)
| .-+.+.|.+. ++.+.... .-| .+|+++.+..|.+||+.+++.|++...
T Consensus 309 ~---~~~~~~L~~~----gI~~~~g~~~~g-~iRiS~~~~~t~edId~l~~al~~~~~ 358 (361)
T 3m5u_A 309 E---PLFVKEAEEA----GMIGLKGHRILG-GIRASIYNALNLDQVKTLCEFMKEFQG 358 (361)
T ss_dssp H---HHHHHHHHHT----TEECCBCCTTTC-SEEEECCTTSCHHHHHHHHHHHHHHHH
T ss_pred h---HHHHHHHHHC----CCEEecCCCccC-eEEEEccCCCCHHHHHHHHHHHHHHHH
Confidence 1 1233444332 12221111 112 499999888899999999999998754
No 45
>3hbx_A GAD 1, glutamate decarboxylase 1; calmodulin-binding, lyase, pyridoxal phosphate; HET: LLP; 2.67A {Arabidopsis thaliana}
Probab=89.73 E-value=0.42 Score=47.32 Aligned_cols=44 Identities=14% Similarity=0.249 Sum_probs=42.3
Q ss_pred hchhhHHHHHhcCchhHHHHHHHHHHHHHHHHHhhccCCceEEe
Q psy2480 35 IALPVWTTLKSMGQTGIQDILTFNFSLVESVRQKLSEYPCLRIL 78 (337)
Q Consensus 35 ~aLplW~alQ~Lg~~~I~~ri~~Af~ls~~l~~~L~~~~~I~il 78 (337)
.++.+|.+++++|.+++.+++++...+++.|.+.|++.++++++
T Consensus 324 ~~~a~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~ 367 (502)
T 3hbx_A 324 QVIAQYYQLIRLGHEGYRNVMENCRENMIVLREGLEKTERFNIV 367 (502)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEE
Confidence 57899999999999999999999999999999999999999998
No 46
>3hl2_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine, sepsecs, protein-RNA complex, alternative splicing, cytoplasm, protein biosynthesis, pyridoxal phosphate, selenium; HET: PLR SEP; 2.81A {Homo sapiens}
Probab=89.55 E-value=0.78 Score=46.71 Aligned_cols=130 Identities=16% Similarity=0.126 Sum_probs=81.9
Q ss_pred cccCcchhhHHHHhhChhhHHHHHHHHHHHHHHHHHHHhhCCC---eEEeecCCCCCCcceeeeccccCcccccccccee
Q psy2480 170 EKAIALPVWTTLKSMGQTGIQDILTFNFSLVESIRQKLSEYPC---LRILSHGPVSGLGLKEVTSQYLPVQTILESVQSC 246 (337)
Q Consensus 170 rr~~AL~lW~~Lq~LG~d~i~~~I~~t~~La~~~~e~L~~~p~---LeiL~~~~waglg~v~~~~~~~~~~~~~~~~lsv 246 (337)
-...++.+|++|+++|.+++.++++..++++++|.+.|++.+. -+++....++..-+.
T Consensus 315 S~Spsldl~~tLL~lGr~Gy~~ll~e~~ela~~L~~~L~~la~~~ge~ll~~~~n~is~a~------------------- 375 (501)
T 3hl2_A 315 SASPSLDVLITLLSLGSNGYKKLLKERKEMFSYLSNQIKKLSEAYNERLLHTPHNPISLAM------------------- 375 (501)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCBCCCTTCSSEEEE-------------------
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhcCCCCCceeEEE-------------------
Confidence 3668899999999999999999999999999999999998764 555542212211111
Q ss_pred EEEEecCCCCCCCCCcchhhHHHHHHHHHHhhcCCCcceEEEEee---eCcEEEE-Eec--------CCC---C---Chh
Q psy2480 247 VVFQFVPKDAGWGPVPAYYDKLNSWLGQILQRDVPSVSLNLTETA---AFGTVLR-ICP--------FEC---S---SGG 308 (337)
Q Consensus 247 VvFRy~P~~~~~e~~~~y~D~LNswLgqiL~~~~~~~~~~v~et~---~~G~~LR-fcp--------lnp---~---T~e 308 (337)
...--+.. . -..++ .||-+|-..+-+|.=.|.... .+|+-+| |.- .-. + +.+
T Consensus 376 ---tl~~~~~~--~----~~~~t-~~gs~Lf~r~vsG~Rvv~~~~~~~i~g~~f~~~g~h~~~~~~~yl~~a~aiG~~~~ 445 (501)
T 3hl2_A 376 ---TLKTLDEH--R----DKAVT-QLGSMLFTRQVSGARVVPLGSMQTVSGYTFRGFMSHTNNYPCAYLNAASAIGMKMQ 445 (501)
T ss_dssp ---ECTTSCTT--T----SCHHH-HHHHHHHHTTCCSCEEECTTCCEEETTEEESSTTTTSSCCSSCEEEEECCTTCCHH
T ss_pred ---eccccccc--c----cccHH-HHHHHHHhcCCCcceeecCCCceEECCeeecCcccCCCCCCchHHHHHHHcCCCHH
Confidence 11100100 0 01233 578888777665544443322 3665444 211 111 1 799
Q ss_pred HHHHHHHHHHHHHhhhhccc
Q psy2480 309 DYESFLVCLDAQVYSGSQGL 328 (337)
Q Consensus 309 dI~~~v~~L~~~~~il~~t~ 328 (337)
||+.|++.|+.....+.+..
T Consensus 446 ~v~~~~~~l~~~~~~~~~~~ 465 (501)
T 3hl2_A 446 DVDLFIKRLDRCLKAVRKER 465 (501)
T ss_dssp HHHHHHHHHHHHHHHHHC--
T ss_pred HHHHHHHHHHHHHHHHHHhh
Confidence 99999999999988776543
No 47
>2c0r_A PSAT, phosphoserine aminotransferase; pyridoxal-5'-phosphate, pyridine serine biosynthesis, amino-acid biosynthesis, pyridoxal phosphate; HET: PLP; 1.2A {Bacillus circulans} SCOP: c.67.1.4 PDB: 1bt4_A* 1w3u_A*
Probab=89.34 E-value=1.4 Score=40.27 Aligned_cols=99 Identities=8% Similarity=0.019 Sum_probs=59.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhCCCe-EEeecCCCCCCcceeeeccccCccccccccceeEEEEecCCCCCCCCCcchhh
Q psy2480 188 GIQDILTFNFSLVESIRQKLSEYPCL-RILSHGPVSGLGLKEVTSQYLPVQTILESVQSCVVFQFVPKDAGWGPVPAYYD 266 (337)
Q Consensus 188 ~i~~~I~~t~~La~~~~e~L~~~p~L-eiL~~~~waglg~v~~~~~~~~~~~~~~~~lsvVvFRy~P~~~~~e~~~~y~D 266 (337)
++-++.++..++++.+.+.|++.+++ ++....+ ....+++.|++. .+.+ ..
T Consensus 260 ~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~-~~~~-------~~ 311 (362)
T 2c0r_A 260 GLEGVQQANRKKASLIYDAIDQSGGFYRGCVDVD--------------------SRSDMNITFRLA-SEEL-------EK 311 (362)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTSTTSSEESSCGG--------------------GBCSSEEEEECS-CHHH-------HH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHcCCccccCCChH--------------------HcCCcEEEEEcC-Ccch-------HH
Confidence 46777888889999999999988755 6653100 112455677762 1111 11
Q ss_pred HHHHHHHHHHhhcCCCcceEEEEeeeCcEEEEEecCCCCChhHHHHHHHHHHHHHh
Q psy2480 267 KLNSWLGQILQRDVPSVSLNLTETAAFGTVLRICPFECSSGGDYESFLVCLDAQVY 322 (337)
Q Consensus 267 ~LNswLgqiL~~~~~~~~~~v~et~~~G~~LRfcplnp~T~edI~~~v~~L~~~~~ 322 (337)
.+.+.|.+. ++.+.......-++|+|+-...|.+||+.+++.|++..+
T Consensus 312 ----~~~~~L~~~----gi~~~~g~~~~~~iRis~~~~~~~e~i~~l~~~l~~~~~ 359 (362)
T 2c0r_A 312 ----EFVKASEQE----GFVGLKGHRSVGGLRASIYNAVPYESCEALVQFMEHFKR 359 (362)
T ss_dssp ----HHHHHHHHT----TEESCBCCTTTCSEEEECCTTSCHHHHHHHHHHHHHHHH
T ss_pred ----HHHHHHHHC----CCeeccCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHH
Confidence 223333322 122211111112699999877789999999999998765
No 48
>2huf_A Alanine glyoxylate aminotransferase; alpha and beta protein, PLP-dependent transferase; HET: LLP; 1.75A {Aedes aegypti} PDB: 2hui_A* 2huu_A*
Probab=89.21 E-value=1.9 Score=39.59 Aligned_cols=105 Identities=10% Similarity=0.154 Sum_probs=62.3
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhCCCeEEeecCCCCCCcceeeeccccCccccccccce-eEEEEecCCCCCCCCCcchh
Q psy2480 187 TGIQDILTFNFSLVESIRQKLSEYPCLRILSHGPVSGLGLKEVTSQYLPVQTILESVQS-CVVFQFVPKDAGWGPVPAYY 265 (337)
Q Consensus 187 d~i~~~I~~t~~La~~~~e~L~~~p~LeiL~~~~waglg~v~~~~~~~~~~~~~~~~ls-vVvFRy~P~~~~~e~~~~y~ 265 (337)
+++.++.++..+.++.+.+.|++. ++++.... ....+ .+.|++. .+.+ .
T Consensus 279 ~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~---------------------~~~~~~~~~~~~~-~~~~-------~ 328 (393)
T 2huf_A 279 EGLPALIARHEDCAKRLYRGLQDA-GFELYADP---------------------KDRLSTVTTIKVP-QGVD-------W 328 (393)
T ss_dssp HCHHHHHHHHHHHHHHHHHHHHHT-TCCBSSCG---------------------GGBCTTEEEEECC-TTCC-------H
T ss_pred hCHHHHHHHHHHHHHHHHHHHHHc-CCeeccCc---------------------cccCCcEEEEEcC-CCCC-------H
Confidence 346667777788899999999887 77665410 01223 6667762 2221 1
Q ss_pred hHHHHHHHHHHhhcCCCcceEEEEee--eCcEEEEEecCCCC-ChhHHHHHHHHHHHHHhhhhccc
Q psy2480 266 DKLNSWLGQILQRDVPSVSLNLTETA--AFGTVLRICPFECS-SGGDYESFLVCLDAQVYSGSQGL 328 (337)
Q Consensus 266 D~LNswLgqiL~~~~~~~~~~v~et~--~~G~~LRfcplnp~-T~edI~~~v~~L~~~~~il~~t~ 328 (337)
++ +.+.|.+.. ++.+.... ..+.++|+++.... +.+|++++++.|++.++.+...+
T Consensus 329 ~~----~~~~L~~~~---gi~v~~g~~~~~~~~~Ri~~~~~~~~~e~i~~~~~~l~~~~~~~~~~~ 387 (393)
T 2huf_A 329 LK----AAQYAMKTY---LVEISGGLGPTAGQVFRIGLMGQNATTERVDRVLQVFQEAVAAVKPDV 387 (393)
T ss_dssp HH----HHHHHHHHH---CEECBCCCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHHHHHHHCC--
T ss_pred HH----HHHHHHHhC---CEEEecCcccccCCEEEEEcccCcCCHHHHHHHHHHHHHHHHHcCCCc
Confidence 22 223332211 13332222 13468999986554 78899999999999888776543
No 49
>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0
Probab=88.23 E-value=5.2 Score=36.53 Aligned_cols=99 Identities=10% Similarity=0.038 Sum_probs=60.5
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhh-CCCeEEeecCCCCCCcceeeeccccCccccccccceeEEEEecCCCCCCCCCcchh
Q psy2480 187 TGIQDILTFNFSLVESIRQKLSE-YPCLRILSHGPVSGLGLKEVTSQYLPVQTILESVQSCVVFQFVPKDAGWGPVPAYY 265 (337)
Q Consensus 187 d~i~~~I~~t~~La~~~~e~L~~-~p~LeiL~~~~waglg~v~~~~~~~~~~~~~~~~lsvVvFRy~P~~~~~e~~~~y~ 265 (337)
+.+.++.+..-+.++.+.+.+++ .|++++... .....+.+++...+.+ .
T Consensus 286 ~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~-------~ 335 (391)
T 3dzz_A 286 DWLRELKQVLRDNFAYAREFLAKEVPEVKVLDS-----------------------NASYLAWVDISALGMN-------A 335 (391)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCTTSEECCC-----------------------CBSSEEEEECGGGCSC-------H
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhCCCcEEecc-----------------------CceEEEEEehhhcCCC-------H
Confidence 44566777778889999999998 899988751 1122233455322222 1
Q ss_pred hHHHHHHHHHHhhcCCCcceEEEEeee----CcEEEEEecCCCCChhHHHHHHHHHHHHHhhh
Q psy2480 266 DKLNSWLGQILQRDVPSVSLNLTETAA----FGTVLRICPFECSSGGDYESFLVCLDAQVYSG 324 (337)
Q Consensus 266 D~LNswLgqiL~~~~~~~~~~v~et~~----~G~~LRfcplnp~T~edI~~~v~~L~~~~~il 324 (337)
++ +.+.|.+.. ++.+..... +..++|+++- .+.++|++.++.|++.+..+
T Consensus 336 ~~----~~~~l~~~~---gi~v~~g~~~~~~~~~~iRis~~--~~~~~i~~~l~~l~~~l~~~ 389 (391)
T 3dzz_A 336 ED----FCKYLREKT---GLIISAGNGYRGNGHEFVRINLA--CPKELVIDGMQRLKQGVLNL 389 (391)
T ss_dssp HH----HHHHHHHHH---CEECEESGGGCTTGGGEEEEECC--SCHHHHHHHHHHHHHHHHTC
T ss_pred HH----HHHHHHHhC---CEEEeCchhhCCCCCCEEEEEec--CCHHHHHHHHHHHHHHHHHh
Confidence 12 223332111 244444332 2369999987 37899999999999887654
No 50
>4eb5_A Probable cysteine desulfurase 2; scaffold, transferase-metal binding protein complex; HET: PLP EPE; 2.53A {Archaeoglobus fulgidus} PDB: 4eb7_A*
Probab=87.70 E-value=5.7 Score=36.05 Aligned_cols=103 Identities=10% Similarity=0.012 Sum_probs=63.8
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhCCCeEEeecCCCCCCcceeeeccccCccccccccceeEEEEecCCCCCCCCCcchhh
Q psy2480 187 TGIQDILTFNFSLVESIRQKLSEYPCLRILSHGPVSGLGLKEVTSQYLPVQTILESVQSCVVFQFVPKDAGWGPVPAYYD 266 (337)
Q Consensus 187 d~i~~~I~~t~~La~~~~e~L~~~p~LeiL~~~~waglg~v~~~~~~~~~~~~~~~~lsvVvFRy~P~~~~~e~~~~y~D 266 (337)
+++.+++++..+.++.+.+.|++.|++++..+.. ....+.+.|++. +.+ .+
T Consensus 252 ~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~--------------------~~~~~~~~~~~~--~~~-------~~ 302 (382)
T 4eb5_A 252 MEWREEAERLRRLRDRIIDNVLKIEESYLNGHPE--------------------KRLPNNVNVRFS--YIE-------GE 302 (382)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTSTTEEECSCSS--------------------SBCTTEEEEEET--TSC-------HH
T ss_pred HhHHHHHHHHHHHHHHHHHHHhhCCCeEEeCCcc--------------------cCCCCEEEEEeC--CcC-------HH
Confidence 4566778888899999999999998988765100 011346777773 221 12
Q ss_pred HHHHHHHHHHhhcCCCcceEEEEee---------------------eCcEEEEEecCCCCChhHHHHHHHHHHHHHhhhh
Q psy2480 267 KLNSWLGQILQRDVPSVSLNLTETA---------------------AFGTVLRICPFECSSGGDYESFLVCLDAQVYSGS 325 (337)
Q Consensus 267 ~LNswLgqiL~~~~~~~~~~v~et~---------------------~~G~~LRfcplnp~T~edI~~~v~~L~~~~~il~ 325 (337)
++- +.|.+. ++.+.... .+..++|+++-...|.+|++++++.|++.++.+.
T Consensus 303 ~~~----~~l~~~----gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~~ 374 (382)
T 4eb5_A 303 SIV----LSLDMA----GIQASTGSACSSKTLQPSHVLMACGLKHEEAHGTLLLTLGRYNTDEDVDRLLEVLPGVIERLR 374 (382)
T ss_dssp HHH----HHHHHH----TCBCBCCCGGGTSSCCCCHHHHHTTCCHHHHTTEEEEECCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHH----HHHHHC----CEEEeccccccCCCCcccHHHHHcCCChhccCCeEEEECCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 222 222221 12222211 1135899996555589999999999999887765
Q ss_pred c
Q psy2480 326 Q 326 (337)
Q Consensus 326 ~ 326 (337)
.
T Consensus 375 ~ 375 (382)
T 4eb5_A 375 S 375 (382)
T ss_dssp H
T ss_pred H
Confidence 4
No 51
>3qm2_A Phosphoserine aminotransferase; structural genomics, center for structural genomics of infec diseases, csgid; 2.25A {Salmonella enterica subsp} PDB: 1bjn_A* 1bjo_A* 3qbo_A*
Probab=87.67 E-value=1.9 Score=41.67 Aligned_cols=97 Identities=11% Similarity=0.035 Sum_probs=57.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhCCCeEEeecCCCCCCcceeeeccccCccccccccc-eeEEEEecCCCCCCCCCcchhh
Q psy2480 188 GIQDILTFNFSLVESIRQKLSEYPCLRILSHGPVSGLGLKEVTSQYLPVQTILESVQ-SCVVFQFVPKDAGWGPVPAYYD 266 (337)
Q Consensus 188 ~i~~~I~~t~~La~~~~e~L~~~p~LeiL~~~~waglg~v~~~~~~~~~~~~~~~~l-svVvFRy~P~~~~~e~~~~y~D 266 (337)
++-.+.++.-++++++.+.|++.+-...... + +..+ .+|+|++..++. |
T Consensus 285 G~~~i~~~~~~l~~~l~~~l~~~~~~~~~~~-~--------------------~~rs~~iv~f~~~~~~~---------~ 334 (386)
T 3qm2_A 285 GVAAMHKINQQKAELLYGVIDNSDFYRNDVA-Q--------------------ANRSRMNVPFQLADNTL---------D 334 (386)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCSSEECCBC-G--------------------GGBCSSEEEEEESSGGG---------H
T ss_pred CHHHHHHHHHHHHHHHHHHHHHCCCcccCCC-H--------------------HHcCceEEEEECCCccc---------c
Confidence 4566677888899999999988732222110 0 1233 589999842111 1
Q ss_pred HHHHHHHHHHhhcCCCcceEEEEe-eeCcEEEEEecCCCCChhHHHHHHHHHHHHHh
Q psy2480 267 KLNSWLGQILQRDVPSVSLNLTET-AAFGTVLRICPFECSSGGDYESFLVCLDAQVY 322 (337)
Q Consensus 267 ~LNswLgqiL~~~~~~~~~~v~et-~~~G~~LRfcplnp~T~edI~~~v~~L~~~~~ 322 (337)
..+.+.|.+. ++.+... ...| .+|+++.+..|.+||+.+++.|++...
T Consensus 335 ---~~~~~~L~~~----gI~~~~g~~~~~-~iRiS~~~~~t~edId~l~~~l~~~~~ 383 (386)
T 3qm2_A 335 ---KVFLEESFAA----GLHALKGHRVVG-GMRASIYNAMPIEGVKALTDFMIDFER 383 (386)
T ss_dssp ---HHHHHHHHHT----TEECCBCCTTTC-SEEEECCTTSCHHHHHHHHHHHHHHHH
T ss_pred ---HHHHHHHHHC----CCEEeCCCCCcC-eEEEEcCCCCCHHHHHHHHHHHHHHHH
Confidence 1122223221 1222111 1112 399999888899999999999998654
No 52
>2ch1_A 3-hydroxykynurenine transaminase; PLP-enzyme, kynurenine pathway, transferase; HET: LLP; 2.4A {Anopheles gambiae} SCOP: c.67.1.3 PDB: 2ch2_A*
Probab=87.49 E-value=2.1 Score=39.40 Aligned_cols=112 Identities=15% Similarity=0.251 Sum_probs=64.7
Q ss_pred HHhhChhhHHHHHHHHHHHHHHHHHHHhhCCCeEEeecCCCCCCcceeeeccccCccccccccceeEEEEecCCCCCCCC
Q psy2480 181 LKSMGQTGIQDILTFNFSLVESIRQKLSEYPCLRILSHGPVSGLGLKEVTSQYLPVQTILESVQSCVVFQFVPKDAGWGP 260 (337)
Q Consensus 181 Lq~LG~d~i~~~I~~t~~La~~~~e~L~~~p~LeiL~~~~waglg~v~~~~~~~~~~~~~~~~lsvVvFRy~P~~~~~e~ 260 (337)
|+.+..+.+.++.++..+.++.+.+.|++. +++++.... + + .....+.|++ |.+.+
T Consensus 272 l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~--------------~----~-~~~~~~~~~~-~~~~~--- 327 (396)
T 2ch1_A 272 LAQIAEEGLENQIKRRIECAQILYEGLGKM-GLDIFVKDP--------------R----H-RLPTVTGIMI-PKGVD--- 327 (396)
T ss_dssp HHHHHHHCHHHHHHHHHHHHHHHHHHHHHH-TCCBSSCSG--------------G----G-BCTTEEEEEC-CTTCC---
T ss_pred HHHHHHhhHHHHHHHHHHHHHHHHHHHHHC-CCeeccCCc--------------c----c-cCCceEEEEc-CCCCC---
Confidence 333334556677888888999999999887 676654100 0 0 1123677776 32222
Q ss_pred CcchhhHHHHHHHHHHhhcCCCcceEEEEee--eCcEEEEEecCCC-CChhHHHHHHHHHHHHHhhhhcc
Q psy2480 261 VPAYYDKLNSWLGQILQRDVPSVSLNLTETA--AFGTVLRICPFEC-SSGGDYESFLVCLDAQVYSGSQG 327 (337)
Q Consensus 261 ~~~y~D~LNswLgqiL~~~~~~~~~~v~et~--~~G~~LRfcplnp-~T~edI~~~v~~L~~~~~il~~t 327 (337)
.++ +.+.|.+.. ++.+.... ..+.++|+|+... .+.+|++++++.|++.+..+...
T Consensus 328 ----~~~----~~~~L~~~~---gi~v~~g~~~~~~~~iRi~~~~~~~~~e~i~~~~~~l~~~l~~~~~~ 386 (396)
T 2ch1_A 328 ----WWK----VSQYAMNNF---SLEVQGGLGPTFGKAWRVGIMGECSTVQKIQFYLYGFKESLKATHPD 386 (396)
T ss_dssp ----HHH----HHHHHHHHH---CBCCBCCCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHHHHHHHCTT
T ss_pred ----HHH----HHHHHHHhC---CEEEecCccccCCCEEEEECCCCcCCHHHHHHHHHHHHHHHHHhCcc
Confidence 122 233332211 12222211 2345899998544 47999999999999988776543
No 53
>3cai_A Possible aminotransferase; RV3778C; 1.80A {Mycobacterium tuberculosis}
Probab=87.28 E-value=4.7 Score=37.23 Aligned_cols=93 Identities=13% Similarity=0.169 Sum_probs=60.1
Q ss_pred HHHHHHHHHHHHHHHHHHHhhCCCeEEeecCCCCCCcceeeeccccCccccccccceeEEEEecCCCCCCCCCcchhhHH
Q psy2480 189 IQDILTFNFSLVESIRQKLSEYPCLRILSHGPVSGLGLKEVTSQYLPVQTILESVQSCVVFQFVPKDAGWGPVPAYYDKL 268 (337)
Q Consensus 189 i~~~I~~t~~La~~~~e~L~~~p~LeiL~~~~waglg~v~~~~~~~~~~~~~~~~lsvVvFRy~P~~~~~e~~~~y~D~L 268 (337)
+.++.++..++++.+.+.|++.|++++.... ....+.+.|++. +.+ .+
T Consensus 301 ~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~---------------------~~~~~~~~~~~~--~~~-------~~-- 348 (406)
T 3cai_A 301 MQSADAYLNRVFDYLMVSLRSLPLVMLIGRP---------------------EAQIPVVSFAVH--KVP-------AD-- 348 (406)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCTTEEECCCC---------------------SSBCSEEEEEET--TBC-------HH--
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCeEEcCCc---------------------cccCCEEEEEEC--CcC-------HH--
Confidence 5567777788999999999999998877510 123456778773 111 12
Q ss_pred HHHHHHHHhhcCCCcceEEEEee-----------eCcEEEEEecCCCCChhHHHHHHHHHHH
Q psy2480 269 NSWLGQILQRDVPSVSLNLTETA-----------AFGTVLRICPFECSSGGDYESFLVCLDA 319 (337)
Q Consensus 269 NswLgqiL~~~~~~~~~~v~et~-----------~~G~~LRfcplnp~T~edI~~~v~~L~~ 319 (337)
.+.+.|.+. ++.+.... .++.++|+++-...|.+||+.+++.|++
T Consensus 349 --~~~~~L~~~----gi~v~~g~~~~~~~~~g~~~~~~~iRis~~~~~t~e~i~~~~~~l~~ 404 (406)
T 3cai_A 349 --RVVQRLADN----GILAIANTGSRVLDVLGVNDVGGAVTVGLAHYSTMAEVDQLVRALAS 404 (406)
T ss_dssp --HHHHHHHHT----TEECEECCSCHHHHHHTTTTTTCCEEEECCTTCCHHHHHHHHHHHHT
T ss_pred --HHHHHHHHC----CcEEecCChHHHHHHcCCCCCCCeEEEEeecCCCHHHHHHHHHHHHH
Confidence 233344331 24443322 1236899998766689999999999875
No 54
>1v72_A Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2.05A {Pseudomonas putida} SCOP: c.67.1.1
Probab=86.96 E-value=4.2 Score=36.57 Aligned_cols=95 Identities=8% Similarity=0.020 Sum_probs=57.6
Q ss_pred hChhhHHHHHHHHHHHHHHHHHHHhhCCCeEEeecCCCCCCcceeeeccccCccccccccceeEEEEecCCCCCCCCCcc
Q psy2480 184 MGQTGIQDILTFNFSLVESIRQKLSEYPCLRILSHGPVSGLGLKEVTSQYLPVQTILESVQSCVVFQFVPKDAGWGPVPA 263 (337)
Q Consensus 184 LG~d~i~~~I~~t~~La~~~~e~L~~~p~LeiL~~~~waglg~v~~~~~~~~~~~~~~~~lsvVvFRy~P~~~~~e~~~~ 263 (337)
+..+...+++++..++++.+.+.+++.++++++. +...+.+.+++.
T Consensus 257 l~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~-----------------------~~~~~~~~~~~~----------- 302 (356)
T 1v72_A 257 LTDDLWLRNARKANAAAQRLAQGLEGLGGVEVLG-----------------------GTEANILFCRLD----------- 302 (356)
T ss_dssp TSTTHHHHHHHHHHHHHHHHHHHHTTCTTEEEES-----------------------CCCSSEEEEEEC-----------
T ss_pred HHhhhHHHHHHHHHHHHHHHHHHHhhCCCcEEcc-----------------------CCCccEEEEEcC-----------
Confidence 3333344567777888999999999889998875 233445556651
Q ss_pred hhhHHHHHHHHHHhhcCCCcceEEEEeeeCcEEEEEecCCCCChhHHHHHHHHHHHHHh
Q psy2480 264 YYDKLNSWLGQILQRDVPSVSLNLTETAAFGTVLRICPFECSSGGDYESFLVCLDAQVY 322 (337)
Q Consensus 264 y~D~LNswLgqiL~~~~~~~~~~v~et~~~G~~LRfcplnp~T~edI~~~v~~L~~~~~ 322 (337)
+++- +.|.+.+ +.+.....++.++|+++--..|.+|++++++.|++.++
T Consensus 303 --~~~~----~~l~~~g----i~v~~g~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~l~ 351 (356)
T 1v72_A 303 --SAMI----DALLKAG----FGFYHDRWGPNVVRFVTSFATTAEDVDHLLNQVRLAAD 351 (356)
T ss_dssp --HHHH----HHHHHTT----CBCBCSSSSTTEEEEECCTTCCHHHHHHHHHHHHHTC-
T ss_pred --HHHH----HHHHhcC----eEEeccccCCCeEEEEecCCCCHHHHHHHHHHHHHHHH
Confidence 1222 2232221 22221112245899995444489999999999987654
No 55
>1qz9_A Kynureninase; kynurenine, tryptophan, PLP, vitamin B6, pyridoxal-5'-phosph hydrolase; HET: PLP P3G; 1.85A {Pseudomonas fluorescens} SCOP: c.67.1.3
Probab=86.95 E-value=7.3 Score=36.04 Aligned_cols=105 Identities=12% Similarity=0.049 Sum_probs=65.9
Q ss_pred HHHHhhChhhHHHHHHHHHHHHHHHHHHHhhC-C--CeEEeecCCCCCCcceeeeccccCccccccccceeEEEEecCCC
Q psy2480 179 TTLKSMGQTGIQDILTFNFSLVESIRQKLSEY-P--CLRILSHGPVSGLGLKEVTSQYLPVQTILESVQSCVVFQFVPKD 255 (337)
Q Consensus 179 ~~Lq~LG~d~i~~~I~~t~~La~~~~e~L~~~-p--~LeiL~~~~waglg~v~~~~~~~~~~~~~~~~lsvVvFRy~P~~ 255 (337)
.+|+.+..+++.++.++..++++.+.+.|++. | ++++..... . ....+.+.|++. +
T Consensus 293 ~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~~~~~~~-----~--------------~~~~~~~~~~~~-~- 351 (416)
T 1qz9_A 293 CGLDVFAQTDMASLRRKSLALTDLFIELVEQRCAAHELTLVTPRE-----H--------------AKRGSHVSFEHP-E- 351 (416)
T ss_dssp HHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHHHTTSCCEECSCSS-----G--------------GGBCSEEEEECT-T-
T ss_pred HHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhccCCCeEEeCCCC-----H--------------HHcCCEEEEecC-C-
Confidence 34444544567778888889999999999885 6 788775200 0 012456777762 1
Q ss_pred CCCCCCcchhhHHHHHHHHHHhhcCCCcceEEEEeeeCcEEEEEecCC-CCChhHHHHHHHHHHHHHhh
Q psy2480 256 AGWGPVPAYYDKLNSWLGQILQRDVPSVSLNLTETAAFGTVLRICPFE-CSSGGDYESFLVCLDAQVYS 323 (337)
Q Consensus 256 ~~~e~~~~y~D~LNswLgqiL~~~~~~~~~~v~et~~~G~~LRfcpln-p~T~edI~~~v~~L~~~~~i 323 (337)
. ++ +.+.|.+. ++.+. ...+.++|+++-+ ..|.+||+++++.|++.+..
T Consensus 352 -~--------~~----l~~~l~~~----gi~~~--~~~~~~lRis~~~~~~t~~~i~~~~~~l~~~~~~ 401 (416)
T 1qz9_A 352 -G--------YA----VIQALIDR----GVIGD--YREPRIMRFGFTPLYTTFTEVWDAVQILGEILDR 401 (416)
T ss_dssp -H--------HH----HHHHHHTT----TEECE--EETTTEEEEECCTTTCCHHHHHHHHHHHHHHHHH
T ss_pred -H--------HH----HHHHHHhC----CcEec--cCCCCeEEEeCcccCCCHHHHHHHHHHHHHHHhc
Confidence 1 22 23334322 23321 1244689999875 45899999999999987654
No 56
>2fnu_A Aminotransferase; protein-product complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PMP UD1; 1.50A {Helicobacter pylori} SCOP: c.67.1.4 PDB: 2fni_A* 2fn6_A*
Probab=86.79 E-value=2.5 Score=38.45 Aligned_cols=43 Identities=7% Similarity=-0.015 Sum_probs=31.4
Q ss_pred chhhHHHHhhChhhHHHHHHHHHHHHHHHHHHHhhCCCeEEee
Q psy2480 175 LPVWTTLKSMGQTGIQDILTFNFSLVESIRQKLSEYPCLRILS 217 (337)
Q Consensus 175 L~lW~~Lq~LG~d~i~~~I~~t~~La~~~~e~L~~~p~LeiL~ 217 (337)
.++..++...+.+.+-+++++..++++.+.+.|++.|++++..
T Consensus 232 ~~~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~ 274 (375)
T 2fnu_A 232 NEIQSALGLSQLKKAPFLMQKREEAALTYDRIFKDNPYFTPLH 274 (375)
T ss_dssp CHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHTTCSSEEESG
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCccccC
Confidence 3343443333445667788888899999999999999988775
No 57
>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides}
Probab=86.69 E-value=2.2 Score=39.40 Aligned_cols=99 Identities=8% Similarity=-0.025 Sum_probs=59.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhCCCeEEeecCCCCCCcceeeeccccCccccccccceeEEEEecCCCCCCCCCcchhh
Q psy2480 187 TGIQDILTFNFSLVESIRQKLSEYPCLRILSHGPVSGLGLKEVTSQYLPVQTILESVQSCVVFQFVPKDAGWGPVPAYYD 266 (337)
Q Consensus 187 d~i~~~I~~t~~La~~~~e~L~~~p~LeiL~~~~waglg~v~~~~~~~~~~~~~~~~lsvVvFRy~P~~~~~e~~~~y~D 266 (337)
+.+.+++++.-+.++.+.+.+++.|+++++.. ..-..+.+++...+.+ .+
T Consensus 303 ~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~-------~~ 352 (407)
T 3nra_A 303 GWMEDRIARHQAIRDELLHVLRGCEGVFARTP-----------------------QAGSYLFPRLPKLAVA-------PA 352 (407)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHTSTTCBCCCC-----------------------SBSSEECCBCCCBSSC-------HH
T ss_pred hHHHHHHHHHHHHHHHHHHHHhcCCCceeccC-----------------------CeeEEEEEeCCCCCCC-------HH
Confidence 34566777778889999999999888877641 1111222233211111 11
Q ss_pred HHHHHHHHHHhhcCCCcceEEEEeee----CcEEEEEecCCCCChhHHHHHHHHHHHHHhhh
Q psy2480 267 KLNSWLGQILQRDVPSVSLNLTETAA----FGTVLRICPFECSSGGDYESFLVCLDAQVYSG 324 (337)
Q Consensus 267 ~LNswLgqiL~~~~~~~~~~v~et~~----~G~~LRfcplnp~T~edI~~~v~~L~~~~~il 324 (337)
+ +.+.|.+.. ++.+..... +..++|+|+-. +.++|+++++.|++.+..+
T Consensus 353 ~----~~~~l~~~~---gi~v~~g~~~~~~~~~~iRis~~~--~~~~i~~~~~~l~~~~~~~ 405 (407)
T 3nra_A 353 E----FVKILRLQA---GVVVTPGTEFSPHTADSVRLNFSQ--DHEAAVAAARRIVTLVERY 405 (407)
T ss_dssp H----HHHHHHHHH---CEECEEGGGTCTTCTTBEEEECCS--CHHHHHHHHHHHHHHHHHH
T ss_pred H----HHHHHHHhC---CEEEeCchhhCCCCCCEEEEEeCC--CHHHHHHHHHHHHHHHHHh
Confidence 2 223332221 244444332 23599999875 8999999999999887654
No 58
>1bw0_A TAT, protein (tyrosine aminotransferase); tyrosine catabolism, pyridoxal-5'-phosphate, PLP; HET: LLP; 2.50A {Trypanosoma cruzi} SCOP: c.67.1.1
Probab=85.80 E-value=9.5 Score=35.43 Aligned_cols=102 Identities=7% Similarity=-0.087 Sum_probs=57.5
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhCCCeEEeecCCCCCCcceeeeccccCccccccccceeEEEEecCCCCCCCCCcchhh
Q psy2480 187 TGIQDILTFNFSLVESIRQKLSEYPCLRILSHGPVSGLGLKEVTSQYLPVQTILESVQSCVVFQFVPKDAGWGPVPAYYD 266 (337)
Q Consensus 187 d~i~~~I~~t~~La~~~~e~L~~~p~LeiL~~~~waglg~v~~~~~~~~~~~~~~~~lsvVvFRy~P~~~~~e~~~~y~D 266 (337)
+.+.++.++.-+.++.+.+.|++.|+++++. +..-..+.+++.+.... +. . ..+
T Consensus 309 ~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~-----------------------~~~~~~~~~~~~~~~~~-~~-~-~~~ 362 (416)
T 1bw0_A 309 EHLDQIVAKIEESAMYLYNHIGECIGLAPTM-----------------------PRGAMYLMSRIDLEKYR-DI-K-TDV 362 (416)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTSTTEEECC-----------------------CCBTTEEEEEECGGGBS-SC-C-SHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCCcccC-----------------------CCeeEEEEEeCCHHHcC-CC-C-CHH
Confidence 3455666777788889999999888888764 11122334455321100 00 0 001
Q ss_pred HHHHHHHHHHhhcCCCcceEEEEeee-C-cEEEEEecCCCCChhHHHHHHHHHHHHHhh
Q psy2480 267 KLNSWLGQILQRDVPSVSLNLTETAA-F-GTVLRICPFECSSGGDYESFLVCLDAQVYS 323 (337)
Q Consensus 267 ~LNswLgqiL~~~~~~~~~~v~et~~-~-G~~LRfcplnp~T~edI~~~v~~L~~~~~i 323 (337)
.+.+.|.+.. ++.+..... + .-++|+|+- .+.++|++.++.|.+.+..
T Consensus 363 ----~~~~~l~~~~---gi~v~~g~~f~~~~~iRis~~--~~~e~l~~~l~~l~~~l~~ 412 (416)
T 1bw0_A 363 ----EFFEKLLEEE---NVQVLPGTIFHAPGFTRLTTT--RPVEVYREAVERIKAFCQR 412 (416)
T ss_dssp ----HHHHHHHHHH---CEECEEGGGGTCTTEEEEECC--SCHHHHHHHHHHHHHHHHH
T ss_pred ----HHHHHHHHHC---CEEEecccccCCCCeEEEEec--CCHHHHHHHHHHHHHHHHH
Confidence 1223332111 244544332 1 248999994 4688999999999887654
No 59
>2bwn_A 5-aminolevulinate synthase; tetrapyrrole biosynthesis, heme biosynthesis, pyridoxal PHOS dependent, transferase, acyltransferase; HET: LLP; 2.1A {Rhodobacter capsulatus} SCOP: c.67.1.4 PDB: 2bwo_A* 2bwp_A*
Probab=85.10 E-value=2.2 Score=39.65 Aligned_cols=97 Identities=11% Similarity=0.092 Sum_probs=57.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhCCCeEEeecCCCCCCcceeeeccccCccccccccceeEEEEecCCCCCCCCCcchhh
Q psy2480 187 TGIQDILTFNFSLVESIRQKLSEYPCLRILSHGPVSGLGLKEVTSQYLPVQTILESVQSCVVFQFVPKDAGWGPVPAYYD 266 (337)
Q Consensus 187 d~i~~~I~~t~~La~~~~e~L~~~p~LeiL~~~~waglg~v~~~~~~~~~~~~~~~~lsvVvFRy~P~~~~~e~~~~y~D 266 (337)
.++.++.++..++++.+.+.|++. +++++. +..+.+.|++. .+. +
T Consensus 298 ~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~------------------------~~~~~~~~~~~-~~~---------~ 342 (401)
T 2bwn_A 298 AEGQKLRDAQQMHAKVLKMRLKAL-GMPIID------------------------HGSHIVPVVIG-DPV---------H 342 (401)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH-TCCBCC------------------------CSSSCEEEECC-CHH---------H
T ss_pred cccHHHHHHHHHHHHHHHHHHHHC-CCcccC------------------------CCCCeEEEEeC-ChH---------H
Confidence 344566777788888999988876 666553 12345666652 110 0
Q ss_pred HHHHHHHHHHhhcCCCcceEEEEeee----Cc-EEEEEecCCCCChhHHHHHHHHHHHHHhh
Q psy2480 267 KLNSWLGQILQRDVPSVSLNLTETAA----FG-TVLRICPFECSSGGDYESFLVCLDAQVYS 323 (337)
Q Consensus 267 ~LNswLgqiL~~~~~~~~~~v~et~~----~G-~~LRfcplnp~T~edI~~~v~~L~~~~~i 323 (337)
...+.+.|.+.. ++.+..... .| .++|+|+-...|.+||+++++.|++.+..
T Consensus 343 --~~~~~~~L~~~~---gi~v~~~~~~~~~~~~~~iRis~~~~~t~~~i~~~~~~l~~~~~~ 399 (401)
T 2bwn_A 343 --TKAVSDMLLSDY---GVYVQPINFPTVPRGTERLRFTPSPVHDLKQIDGLVHAMDLLWAR 399 (401)
T ss_dssp --HHHHHHHHHHHH---CEECCEECTTTSCTTCCEEEECCCTTSCHHHHHHHHHHHHHHC--
T ss_pred --HHHHHHHHHhcC---CEEEeecCCCCCCCCCceEEEEeeCCCCHHHHHHHHHHHHHHHHh
Confidence 112333442111 133333221 24 58999998666999999999999886543
No 60
>1eg5_A Aminotransferase; PLP-dependent enzymes, iron-sulfur-cluster synthesis, C-S BE transferase; HET: PLP; 2.00A {Thermotoga maritima} SCOP: c.67.1.3 PDB: 1ecx_A*
Probab=84.93 E-value=8.2 Score=34.92 Aligned_cols=102 Identities=12% Similarity=0.105 Sum_probs=61.7
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhCCCeEEeecCCCCCCcceeeeccccCccccccccceeEEEEecCCCCCCCCCcchhh
Q psy2480 187 TGIQDILTFNFSLVESIRQKLSEYPCLRILSHGPVSGLGLKEVTSQYLPVQTILESVQSCVVFQFVPKDAGWGPVPAYYD 266 (337)
Q Consensus 187 d~i~~~I~~t~~La~~~~e~L~~~p~LeiL~~~~waglg~v~~~~~~~~~~~~~~~~lsvVvFRy~P~~~~~e~~~~y~D 266 (337)
+.+.+++++..+.++.+.+.|++ ++++++.+.. ....+.+.|++. +.+ .+
T Consensus 256 ~~~~~~~~~~~~~~~~l~~~L~~-~g~~~~~~~~--------------------~~~~~~~~~~~~--~~~-------~~ 305 (384)
T 1eg5_A 256 EELSEAAKHMEKLRSKLVSGLMN-LGAHIITPLE--------------------ISLPNTLSVSFP--NIR-------GS 305 (384)
T ss_dssp HTHHHHHHHHHHHHHHHHHHHHT-TTCEECSCTT--------------------SBCTTEEEEECT--TCC-------HH
T ss_pred HhHHHHHHHHHHHHHHHHHHhCC-CCeEEeCCcc--------------------cCCCCEEEEEeC--CCC-------HH
Confidence 45667788888899999999988 7888765210 012346677763 111 12
Q ss_pred HHHHHHHHHHhhcCCCcceEEEEeee---------------------CcEEEEEecCCCCChhHHHHHHHHHHHHHhhhh
Q psy2480 267 KLNSWLGQILQRDVPSVSLNLTETAA---------------------FGTVLRICPFECSSGGDYESFLVCLDAQVYSGS 325 (337)
Q Consensus 267 ~LNswLgqiL~~~~~~~~~~v~et~~---------------------~G~~LRfcplnp~T~edI~~~v~~L~~~~~il~ 325 (337)
++ .+.|.+. ++.+..... ...++|+++-...|.+||+++++.|++.+..+.
T Consensus 306 ~~----~~~l~~~----gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~~ 377 (384)
T 1eg5_A 306 TL----QNLLSGY----GIYVSTSSACTSKDERLRHVLDAMGVDRRIAQGAIRISLCKYNTEEEVDYFLKKIEEILSFLD 377 (384)
T ss_dssp HH----HHHHHHT----TEECBC------------CHHHHTTCCHHHHHHEEEEECCTTCCHHHHHHHHHHHHHHHHHC-
T ss_pred HH----HHHHhhC----CeEEeccccccCCCCcchHHHHHcCCChhhcCCeEEEECCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 22 2333221 233332110 125899997655689999999999999887664
Q ss_pred c
Q psy2480 326 Q 326 (337)
Q Consensus 326 ~ 326 (337)
.
T Consensus 378 ~ 378 (384)
T 1eg5_A 378 L 378 (384)
T ss_dssp -
T ss_pred h
Confidence 3
No 61
>2zyj_A Alpha-aminodipate aminotransferase; alpha-aminoadipate aminotransferase; HET: PGU; 1.67A {Thermus thermophilus} PDB: 2egy_A* 2dtv_A* 2zg5_A* 2zp7_A* 2z1y_A* 3cbf_A*
Probab=84.58 E-value=13 Score=34.37 Aligned_cols=97 Identities=9% Similarity=0.001 Sum_probs=57.8
Q ss_pred HHHHHHHHHHHHHHHHHHHhh-CC-CeEEeecCCCCCCcceeeeccccCccccccccceeEEEEecCCCCCCCCCcchhh
Q psy2480 189 IQDILTFNFSLVESIRQKLSE-YP-CLRILSHGPVSGLGLKEVTSQYLPVQTILESVQSCVVFQFVPKDAGWGPVPAYYD 266 (337)
Q Consensus 189 i~~~I~~t~~La~~~~e~L~~-~p-~LeiL~~~~waglg~v~~~~~~~~~~~~~~~~lsvVvFRy~P~~~~~e~~~~y~D 266 (337)
+.++.+..-+.++.+.+.+++ .| +++++. +..-..+.+++. .+.+
T Consensus 290 ~~~~~~~~~~~~~~l~~~L~~~~~~g~~~~~-----------------------~~~g~~~~~~~~-~~~~--------- 336 (397)
T 2zyj_A 290 LERVRRVYREKAQAMLHALDREVPKEVRYTR-----------------------PKGGMFVWMELP-KGLS--------- 336 (397)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSCTTSEECC-----------------------CSBSSEEEEECS-TTCC---------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCeEEcc-----------------------CCccEEEEEEcC-CCCC---------
Confidence 334444555667778888876 57 587764 122334556652 2221
Q ss_pred HHHHHHHHHHhhcCCCcceEEEEeee------CcEEEEEecCCCCChhHHHHHHHHHHHHHhhhh
Q psy2480 267 KLNSWLGQILQRDVPSVSLNLTETAA------FGTVLRICPFECSSGGDYESFLVCLDAQVYSGS 325 (337)
Q Consensus 267 ~LNswLgqiL~~~~~~~~~~v~et~~------~G~~LRfcplnp~T~edI~~~v~~L~~~~~il~ 325 (337)
...+.+.|.+. ++.+..... +..++|+|+-.. +.++|+++++.|++.+..+.
T Consensus 337 --~~~~~~~l~~~----gi~v~~g~~f~~~~~~~~~iRis~~~~-~~~~i~~~~~~l~~~l~~~~ 394 (397)
T 2zyj_A 337 --AEGLFRRALEE----NVAFVPGGPFFANGGGENTLRLSYATL-DREGIAEGVRRLGRALKGLL 394 (397)
T ss_dssp --HHHHHHHHHHT----TEEEEESGGGCTTSCCTTEEEEECSSS-CHHHHHHHHHHHHHHHHHHH
T ss_pred --HHHHHHHHHHC----CCEEechHHhcCCCCCCCeEEEEcCCC-CHHHHHHHHHHHHHHHHHHH
Confidence 11233444333 355655432 235899998775 89999999999998776543
No 62
>3bc8_A O-phosphoseryl-tRNA(SEC) selenium transferase; disorder-order transition, phosphate-loop, pyridoxal phospha selenocysteine synthase (SECS, sepsecs); HET: LLP; 1.65A {Mus musculus} SCOP: c.67.1.9 PDB: 3bca_A* 3bcb_A*
Probab=84.35 E-value=0.47 Score=47.53 Aligned_cols=77 Identities=18% Similarity=0.204 Sum_probs=59.0
Q ss_pred CCCcccccchhccccccccccc-CCCCc------c-----ccccccCcchhhHHHHhhChhhHHHHHHHHHHHHHHHHHH
Q psy2480 139 PVPAYYDKLNSWLGFTNIGDDL-STPLS------M-----QTNEKAIALPVWTTLKSMGQTGIQDILTFNFSLVESIRQK 206 (337)
Q Consensus 139 ~~~~~~d~ln~WLG~~~~p~V~-~~~ld------~-----q~srr~~AL~lW~~Lq~LG~d~i~~~I~~t~~La~~~~e~ 206 (337)
..|.+..+.-.||+.+--..+. .+.-+ . +.+. .+|++|.+++++|.+++.+++++.+++++++.+.
T Consensus 256 ~AD~~v~S~HK~l~a~~~~~~l~~rd~~~~~~~~~~~~g~~s~S--psL~l~~~l~~~G~~g~~~~i~~~~~~a~~l~~~ 333 (450)
T 3bc8_A 256 RIDAFVQSLDKNFMVPVGGAIIAGFNEPFIQDISKMYPGRASAS--PSLDVLITLLSLGCSGYRKLLKERKEMFVYLSTQ 333 (450)
T ss_dssp CCCEEEEEHHHHHSCCSSCEEEEESCHHHHHHHHHHSCSCBCSH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEECCccCCCchhccEEEEecCHHHHHHHHHHhhcCCccc--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4566667888888877444444 23211 0 1122 2599999999999999999999999999999999
Q ss_pred HhhCC---CeEEee
Q psy2480 207 LSEYP---CLRILS 217 (337)
Q Consensus 207 L~~~p---~LeiL~ 217 (337)
+++.+ +++++.
T Consensus 334 l~~~~~~~g~~~l~ 347 (450)
T 3bc8_A 334 LKKLAEAHNERLLQ 347 (450)
T ss_dssp HHHHHHHTTCCBCC
T ss_pred HHhhHHhcCceecC
Confidence 99999 998886
No 63
>3dyd_A Tyrosine aminotransferase; PLP, SGC, structural genomics, structural genomics consortium, disease mutation, phenylalani catabolism; HET: PLP; 2.30A {Homo sapiens} PDB: 3pdx_A*
Probab=83.96 E-value=14 Score=34.94 Aligned_cols=103 Identities=11% Similarity=-0.015 Sum_probs=58.9
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhCCCeEEeecCCCCCCcceeeeccccCccccccccceeEEEEecCCCCCCCCCcchhh
Q psy2480 187 TGIQDILTFNFSLVESIRQKLSEYPCLRILSHGPVSGLGLKEVTSQYLPVQTILESVQSCVVFQFVPKDAGWGPVPAYYD 266 (337)
Q Consensus 187 d~i~~~I~~t~~La~~~~e~L~~~p~LeiL~~~~waglg~v~~~~~~~~~~~~~~~~lsvVvFRy~P~~~~~e~~~~y~D 266 (337)
+.+.++.+..-+.++.+.+.|++.|+++++.. .....+.+++.....+... +
T Consensus 320 ~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~p-----------------------~~g~~~~~~l~~~~~~~~~-----~ 371 (427)
T 3dyd_A 320 EFYHNTLSFLKSNADLCYGALAAIPGLRPVRP-----------------------SGAMYLMVGIEMEHFPEFE-----N 371 (427)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHSTTEEEECC-----------------------SBTTEEEEEECGGGCTTCS-----S
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCceecCC-----------------------CeeEEEEEecCHhhcCCCC-----C
Confidence 44556667777788899999999999987741 1122233344211110000 0
Q ss_pred HHHHHHHHHHhhcCCCcceEEEEeee--CcEEEEEecCCCCChhHHHHHHHHHHHHHhhh
Q psy2480 267 KLNSWLGQILQRDVPSVSLNLTETAA--FGTVLRICPFECSSGGDYESFLVCLDAQVYSG 324 (337)
Q Consensus 267 ~LNswLgqiL~~~~~~~~~~v~et~~--~G~~LRfcplnp~T~edI~~~v~~L~~~~~il 324 (337)
...+.+.|.+.. ++.+..... ..-++|+|.- .+.++|++.++.|++.+..+
T Consensus 372 --~~~~~~~l~~~~---gV~v~~g~~~~~~~~iRis~~--~~~e~i~~~l~~l~~~l~~~ 424 (427)
T 3dyd_A 372 --DVEFTERLVAEQ---SVHCLPATCFEYPNFIRVVIT--VPEVMMLEACSRIQEFCEQH 424 (427)
T ss_dssp --HHHHHHHHHHHH---CEECEEGGGGTCTTEEEEESC--SCHHHHHHHHHHHHHHHHHH
T ss_pred --HHHHHHHHHHHC---CEEEECCcccCCCCeEEEEEC--CCHHHHHHHHHHHHHHHHHh
Confidence 011223332222 255554433 2359999964 47899999999999877654
No 64
>3gju_A Putative aminotransferase; pyridoxal phosphate, PLP-dependent transferase-like fold, ST genomics, joint center for structural genomics, JCSG; HET: MSE LLP PLP; 1.55A {Mesorhizobium loti} PDB: 3fcr_A*
Probab=83.69 E-value=13 Score=35.49 Aligned_cols=41 Identities=15% Similarity=0.072 Sum_probs=30.8
Q ss_pred eEEEEeeeCcEEEEEecCCCCChhHHHHHHHHHHHHHhhhhc
Q psy2480 285 LNLTETAAFGTVLRICPFECSSGGDYESFLVCLDAQVYSGSQ 326 (337)
Q Consensus 285 ~~v~et~~~G~~LRfcplnp~T~edI~~~v~~L~~~~~il~~ 326 (337)
+.+.... .+-++||+|--..|.++|+++++.|++.+..+..
T Consensus 418 v~v~~~~-~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~~~~ 458 (460)
T 3gju_A 418 VIGRAMP-QGDILGFAPPLCLTREQADIVVSKTADAVKSVFA 458 (460)
T ss_dssp EECEECS-SSCEEEECCCTTCCHHHHHHHHHHHHHHHHHHHC
T ss_pred eEEecCC-CCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 4444332 3479999987777999999999999998876543
No 65
>3kax_A Aminotransferase, classes I and II; PLP, C-S lyase, transf structural genomics, center for structural genomics of INFE diseases, csgid; HET: LLP MSE PLP; 1.70A {Bacillus anthracis str} PDB: 3t32_A*
Probab=83.45 E-value=11 Score=34.09 Aligned_cols=95 Identities=8% Similarity=-0.013 Sum_probs=57.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHhh-CCCeEEeecCCCCCCcceeeeccccCccccccccceeEEEEecCCCCCCCCCcchhh
Q psy2480 188 GIQDILTFNFSLVESIRQKLSE-YPCLRILSHGPVSGLGLKEVTSQYLPVQTILESVQSCVVFQFVPKDAGWGPVPAYYD 266 (337)
Q Consensus 188 ~i~~~I~~t~~La~~~~e~L~~-~p~LeiL~~~~waglg~v~~~~~~~~~~~~~~~~lsvVvFRy~P~~~~~e~~~~y~D 266 (337)
.+.++.+..-+.++.+.+.+++ .|+++++.. ...-.+.+++...+.+
T Consensus 283 ~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~--------- 330 (383)
T 3kax_A 283 WLNEIRFYIEDNAKFACEYIKDHIPTLSVMKP-----------------------EGSFLLWIDCSALNLS--------- 330 (383)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCTTCEECCC-----------------------SBSSEEEEECGGGCCC---------
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhCCCceEecC-----------------------CceEEEEEEccccCCC---------
Confidence 3556667777888899999987 789888751 1111222454322222
Q ss_pred HHHHHHHHHHhhcCCCcceEEEEeee----CcEEEEEecCCCCChhHHHHHHHHHHHHH
Q psy2480 267 KLNSWLGQILQRDVPSVSLNLTETAA----FGTVLRICPFECSSGGDYESFLVCLDAQV 321 (337)
Q Consensus 267 ~LNswLgqiL~~~~~~~~~~v~et~~----~G~~LRfcplnp~T~edI~~~v~~L~~~~ 321 (337)
...+.+.|.+.. ++.+..... ++.++|+++-+ +.++|++.++.|++.+
T Consensus 331 --~~~~~~~l~~~~---gi~v~~g~~~~~~~~~~iRi~~~~--~~~~i~~~l~~l~~~l 382 (383)
T 3kax_A 331 --QDERTKLLEEKG---KIIVEPGEKYGLGGEEHIGINIGC--PRSVLEEILNRLRHTF 382 (383)
T ss_dssp --HHHHHHHHHHTS---CEECEESGGGCTTCTTEEEEECSS--CHHHHHHHHHHHHHHH
T ss_pred --HHHHHHHHHhhC---CEEeECchhhcCCCCCeEEEEEcC--CHHHHHHHHHHHHHHh
Confidence 112334443222 255555432 23699999774 7899999999988754
No 66
>2zc0_A Alanine glyoxylate transaminase; alanine:glyoxylate aminotransferase, archaea, thermococcus L transferase; HET: PMP; 2.30A {Thermococcus litoralis}
Probab=83.24 E-value=4.1 Score=37.72 Aligned_cols=29 Identities=10% Similarity=-0.106 Sum_probs=25.1
Q ss_pred EEEEEecCCCCChhHHHHHHHHHHHHHhhh
Q psy2480 295 TVLRICPFECSSGGDYESFLVCLDAQVYSG 324 (337)
Q Consensus 295 ~~LRfcplnp~T~edI~~~v~~L~~~~~il 324 (337)
.++|+|+-.. |.+||+++++.|++.+..+
T Consensus 376 ~~iRis~~~~-~~~~i~~~~~~l~~~l~~~ 404 (407)
T 2zc0_A 376 NAIRLNFSRP-SKEEIPIGIKKLAKLYKEK 404 (407)
T ss_dssp TEEEEECSSS-CTTHHHHHHHHHHHHHHHH
T ss_pred CeEEEEeCCC-CHHHHHHHHHHHHHHHHHH
Confidence 5899999777 8999999999999887655
No 67
>1svv_A Threonine aldolase; structural genomics, structural genomics of pathogenic proto SGPP, protein structure initiative, PSI; 2.10A {Leishmania major} SCOP: c.67.1.1
Probab=82.91 E-value=4.5 Score=36.32 Aligned_cols=95 Identities=14% Similarity=0.132 Sum_probs=56.6
Q ss_pred hChhhHHHHHHHHHHHHHHHHHHHhhCCCeEEeecCCCCCCcceeeeccccCccccccccceeEEEEecCCCCCCCCCcc
Q psy2480 184 MGQTGIQDILTFNFSLVESIRQKLSEYPCLRILSHGPVSGLGLKEVTSQYLPVQTILESVQSCVVFQFVPKDAGWGPVPA 263 (337)
Q Consensus 184 LG~d~i~~~I~~t~~La~~~~e~L~~~p~LeiL~~~~waglg~v~~~~~~~~~~~~~~~~lsvVvFRy~P~~~~~e~~~~ 263 (337)
+..+.+.++.++..+.++.+.+.| +.++++++. +...+.+.+++.
T Consensus 261 l~~~~~~~~~~~~~~~~~~l~~~L-~~~~~~~~~-----------------------~~~~~~~~~~~~----------- 305 (359)
T 1svv_A 261 MKDNLFFELGAHSNKMAAILKAGL-EACGIRLAW-----------------------PSASNQLFPILE----------- 305 (359)
T ss_dssp TSTTHHHHHHHHHHHHHHHHHHHH-HHTTCCBSS-----------------------CCSSSEECBEEE-----------
T ss_pred HhhhhHHHHHHHHHHHHHHHHHHh-ccCCeEEcc-----------------------CCccceEEEEcC-----------
Confidence 444455677888888999999999 567777664 122233333331
Q ss_pred hhhHHHHHHHHHHhhcCCCcceEEEEeee-CcEEEEEecCCCCChhHHHHHHHHHHHHHh
Q psy2480 264 YYDKLNSWLGQILQRDVPSVSLNLTETAA-FGTVLRICPFECSSGGDYESFLVCLDAQVY 322 (337)
Q Consensus 264 y~D~LNswLgqiL~~~~~~~~~~v~et~~-~G~~LRfcplnp~T~edI~~~v~~L~~~~~ 322 (337)
+ .+.+.|.+.. ++.+..... +..++|+|+--..+.+||+++++.|++.+.
T Consensus 306 --~----~~~~~l~~~~---gi~v~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~ 356 (359)
T 1svv_A 306 --N----TMIAELNNDF---DMYTVEPLKDGTCIMRLCTSWATEEKECHRFVEVLKRLVA 356 (359)
T ss_dssp --H----HHHHHHTTTE---ECEEEEEETTTEEEEEEECCTTCCHHHHHHHHHHHHHC--
T ss_pred --H----HHHHHHHHhc---CEEEEecccCCCceEEEEccCcCCHHHHHHHHHHHHHHHh
Confidence 1 1223333321 244433322 336999996544589999999999987654
No 68
>3ke3_A Putative serine-pyruvate aminotransferase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP; 2.20A {Psychrobacter arcticus 273-4}
Probab=82.73 E-value=2.4 Score=39.60 Aligned_cols=101 Identities=11% Similarity=0.137 Sum_probs=59.5
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhhCCCeEEeecCCCCCCcceeeeccccCccccccccceeEEEEecCCCCCCCCCcchh
Q psy2480 186 QTGIQDILTFNFSLVESIRQKLSEYPCLRILSHGPVSGLGLKEVTSQYLPVQTILESVQSCVVFQFVPKDAGWGPVPAYY 265 (337)
Q Consensus 186 ~d~i~~~I~~t~~La~~~~e~L~~~p~LeiL~~~~waglg~v~~~~~~~~~~~~~~~~lsvVvFRy~P~~~~~e~~~~y~ 265 (337)
.+++-++.++..++++.+.+.+++. +++++... +...+.+.+-+ +++.+ .
T Consensus 270 ~~g~~~~~~~~~~l~~~l~~~l~~~-g~~~~~~~---------------------~~~~~~i~~~~-~~~~~------~- 319 (379)
T 3ke3_A 270 EIGFDILRDAQWELGNRVRKVLTDK-GIESVAAE---------------------GFEAPGVVVSY-TERDD------M- 319 (379)
T ss_dssp HHCHHHHHHHHHHHHHHHHHHHHHT-TCCBSBCT---------------------TCBCSSEEEEE-CSCHH------H-
T ss_pred HhcHHHHHHHHHHHHHHHHHHHHHc-CCEecCCc---------------------cccCceEEEEc-cCCcc------h-
Confidence 3456677778889999999999887 66665411 11234333222 11111 0
Q ss_pred hHHHHHHHHHHhhcCCCcceEEEEee-------eCcEEEEEecCCCCChhHHHHHHHHHHHHHhhhh
Q psy2480 266 DKLNSWLGQILQRDVPSVSLNLTETA-------AFGTVLRICPFECSSGGDYESFLVCLDAQVYSGS 325 (337)
Q Consensus 266 D~LNswLgqiL~~~~~~~~~~v~et~-------~~G~~LRfcplnp~T~edI~~~v~~L~~~~~il~ 325 (337)
.. .+.|.+. ++.+.... ..+-++|+|+.-..|.+||+++++.|++.++.+.
T Consensus 320 -~~----~~~L~~~----Gi~v~~g~~~~~~~~~~~~~lRis~~~~~t~~di~~~~~~l~~~l~~~~ 377 (379)
T 3ke3_A 320 -HK----GSAFAEA----GLQIAAGVPLKVGEPDNFKTFRLGLFGLDKLTDIDGTVERFEKALDEVL 377 (379)
T ss_dssp -HS----SHHHHHT----TCCCEECCCCSSCCCTTCCEEEEECCSHHHHTCHHHHHHHHHHHHHHHH
T ss_pred -HH----HHHHHHC----CeEEeCCccccccccCcCCEEEEeCCcCCCHHHHHHHHHHHHHHHHHhc
Confidence 00 1222221 23333321 1256899999766699999999999998877654
No 69
>2dkj_A Serine hydroxymethyltransferase; PLP dependent enzyme, structural genomics; HET: PLP; 1.15A {Thermus thermophilus}
Probab=82.64 E-value=7.9 Score=35.62 Aligned_cols=99 Identities=10% Similarity=0.115 Sum_probs=61.8
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhCCCeEEeecCCCCCCcceeeeccccCccccccccceeEEEEecCCCCCCCCCcchhh
Q psy2480 187 TGIQDILTFNFSLVESIRQKLSEYPCLRILSHGPVSGLGLKEVTSQYLPVQTILESVQSCVVFQFVPKDAGWGPVPAYYD 266 (337)
Q Consensus 187 d~i~~~I~~t~~La~~~~e~L~~~p~LeiL~~~~waglg~v~~~~~~~~~~~~~~~~lsvVvFRy~P~~~~~e~~~~y~D 266 (337)
+.+.+++++..+.++.+.+.|++. +++++.. +...+.+.|++.+.+.+ .+
T Consensus 277 ~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~----------------------~~~~~~~~~~~~~~~~~-------~~ 326 (407)
T 2dkj_A 277 PEFKEYSRLVVENAKRLAEELARR-GYRIVTG----------------------GTDNHLFLVDLRPKGLT-------GK 326 (407)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHT-TCEEGGG----------------------SCSSSEEEEECGGGTCC-------HH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHhC-CceeecC----------------------CCCceEEEEECcccCCC-------HH
Confidence 456677888888999999999988 7877641 12345566777432211 12
Q ss_pred HHHHHHHHHHhhcCCCcceEEEEee--------eCcEEEEEecCCC----CChhHHHHHHHHHHHHHhh
Q psy2480 267 KLNSWLGQILQRDVPSVSLNLTETA--------AFGTVLRICPFEC----SSGGDYESFLVCLDAQVYS 323 (337)
Q Consensus 267 ~LNswLgqiL~~~~~~~~~~v~et~--------~~G~~LRfcplnp----~T~edI~~~v~~L~~~~~i 323 (337)
. +.+.|.+. ++.+.... ..+.++|+|+... .|.+|++++++.|++.+..
T Consensus 327 ~----~~~~l~~~----gi~v~~~~~~~~~~~~~~~~~iRis~~~~~~~~~~~~~i~~~~~~l~~~~~~ 387 (407)
T 2dkj_A 327 E----AEERLDAV----GITVNKNAIPFDPKPPRVTSGIRIGTPAITTRGFTPEEMPLVAELIDRALLE 387 (407)
T ss_dssp H----HHHHHHHT----TEECEECCCTTCSSCTTTCSEEEEECHHHHHTTCCGGGHHHHHHHHHHHHHH
T ss_pred H----HHHHHHHc----CceecCCcCccccccccCCCceeeecccccccCCCHHHHHHHHHHHHHHHhc
Confidence 2 23334321 24444321 1134799998542 4899999999999887665
No 70
>1xi9_A Putative transaminase; alanine aminotransferase, southeast collaboratory for structural genomics, secsg; HET: PLP; 2.33A {Pyrococcus furiosus} SCOP: c.67.1.1
Probab=82.51 E-value=7.7 Score=36.09 Aligned_cols=100 Identities=7% Similarity=-0.024 Sum_probs=58.8
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHHhhCCCeEEeecCCCCCCcceeeeccccCccccccccceeEEE-EecCC-CCCCCCCc
Q psy2480 185 GQTGIQDILTFNFSLVESIRQKLSEYPCLRILSHGPVSGLGLKEVTSQYLPVQTILESVQSCVVF-QFVPK-DAGWGPVP 262 (337)
Q Consensus 185 G~d~i~~~I~~t~~La~~~~e~L~~~p~LeiL~~~~waglg~v~~~~~~~~~~~~~~~~lsvVvF-Ry~P~-~~~~e~~~ 262 (337)
+.+.+.++.+...+.++.+.+.|++.|+++++.. .-+.++| ++.+. +.+
T Consensus 298 ~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~------------------------~~~~~~~~~~~~~~~~~----- 348 (406)
T 1xi9_A 298 PMDYLKEYMKKLKERRDYIYKRLNEIPGISTTKP------------------------QGAFYIFPKIEVGPWKN----- 348 (406)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHTSTTEECCCC------------------------CBSSEECCEECSCSCSS-----
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHhCCCCeeecC------------------------CeeEEEEEecCccCCCC-----
Confidence 3344566677778888999999999888877641 1122222 33211 111
Q ss_pred chhhHHHHHHHHHHhhcCCCcceEEEEeee----CcEEEEEecCCCCChhHHHHHHHHHHHHHhhh
Q psy2480 263 AYYDKLNSWLGQILQRDVPSVSLNLTETAA----FGTVLRICPFECSSGGDYESFLVCLDAQVYSG 324 (337)
Q Consensus 263 ~y~D~LNswLgqiL~~~~~~~~~~v~et~~----~G~~LRfcplnp~T~edI~~~v~~L~~~~~il 324 (337)
...+.+.|.+.. ++.+..... +..++|+|+- .+.++|+++++.|++.+..+
T Consensus 349 ------~~~l~~~l~~~~---gi~v~~g~~f~~~~~~~lRis~~--~~~~~i~~~~~~l~~~l~~~ 403 (406)
T 1xi9_A 349 ------DKEFVLDVLHNA---HVLFVHGSGFGEYGAGHFRAVFL--PPIEILEEAMDRFEKFMKER 403 (406)
T ss_dssp ------HHHHHHHHHHHH---CEECEEGGGGCGGGTTBEEEECC--SCHHHHHHHHHHHHHHHHHC
T ss_pred ------HHHHHHHHHHhC---CEEEeCchhcCCCCCCEEEEEec--CCHHHHHHHHHHHHHHHHHH
Confidence 112233332111 244444332 1358999986 67899999999998877654
No 71
>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1
Probab=82.14 E-value=5.7 Score=36.51 Aligned_cols=108 Identities=11% Similarity=0.050 Sum_probs=60.5
Q ss_pred hhHHHHhh--ChhhHHHHHHHHHHHHHHHHHHHhhCCCeEEeecCCCCCCcceeeeccccCccccccccceeEEEEecCC
Q psy2480 177 VWTTLKSM--GQTGIQDILTFNFSLVESIRQKLSEYPCLRILSHGPVSGLGLKEVTSQYLPVQTILESVQSCVVFQFVPK 254 (337)
Q Consensus 177 lW~~Lq~L--G~d~i~~~I~~t~~La~~~~e~L~~~p~LeiL~~~~waglg~v~~~~~~~~~~~~~~~~lsvVvFRy~P~ 254 (337)
.+..+..+ +.+.+.++.++..+.++.+.+.|++.|+++++.. .....+.+++...
T Consensus 275 ~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~-----------------------~~~~~~~~~~~~~ 331 (388)
T 1j32_A 275 QYGAIAAYENSQDCVQEMLAAFAERRRYMLDALNAMPGLECPKP-----------------------DGAFYMFPSIAKT 331 (388)
T ss_dssp HHHHHHHHHSCSHHHHHHHHHHHHHHHHHHHHHHTCTTCBCCCC-----------------------CBTTEECCBCGGG
T ss_pred HHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHhhCCCCcccCC-----------------------CeeEEEEEecCCC
Confidence 33334444 4445667777788889999999999888876641 0000111122110
Q ss_pred CCCCCCCcchhhHHHHHHHHHHhhcCCCcceEEEEeeeC--cEEEEEecCCCCChhHHHHHHHHHHHHHhh
Q psy2480 255 DAGWGPVPAYYDKLNSWLGQILQRDVPSVSLNLTETAAF--GTVLRICPFECSSGGDYESFLVCLDAQVYS 323 (337)
Q Consensus 255 ~~~~e~~~~y~D~LNswLgqiL~~~~~~~~~~v~et~~~--G~~LRfcplnp~T~edI~~~v~~L~~~~~i 323 (337)
+.+ ...+.+.|.+.. ++.+...... ..++|+|+- .+.++|++.++.|++.+..
T Consensus 332 ~~~-----------~~~~~~~l~~~~---gi~v~~g~~~~~~~~iRis~~--~~~~~i~~~~~~l~~~l~~ 386 (388)
T 1j32_A 332 GRS-----------SLDFCSELLDQH---QVATVPGAAFGADDCIRLSYA--TDLDTIKRGMERLEKFLHG 386 (388)
T ss_dssp TCC-----------HHHHHHHHHHHH---CEECEEGGGGTCTTBEEEECC--SCHHHHHHHHHHHHHHHHH
T ss_pred CCC-----------HHHHHHHHHHhC---CEEEeChhhhCCCCcEEEEec--CCHHHHHHHHHHHHHHHHH
Confidence 111 112333333211 2444443321 358999985 4789999999999887654
No 72
>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A*
Probab=81.55 E-value=14 Score=33.60 Aligned_cols=94 Identities=15% Similarity=0.139 Sum_probs=56.8
Q ss_pred HHHHHHHHHHHHHHHHHHHhh-CCCeEEeecCCCCCCcceeeeccccCccccccccceeEEEEecCCCCCCCCCcchhhH
Q psy2480 189 IQDILTFNFSLVESIRQKLSE-YPCLRILSHGPVSGLGLKEVTSQYLPVQTILESVQSCVVFQFVPKDAGWGPVPAYYDK 267 (337)
Q Consensus 189 i~~~I~~t~~La~~~~e~L~~-~p~LeiL~~~~waglg~v~~~~~~~~~~~~~~~~lsvVvFRy~P~~~~~e~~~~y~D~ 267 (337)
+.++.+..-+.++.+.+.+++ .|++++... ...-.+.+++...+.+
T Consensus 292 ~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~---------- 338 (391)
T 4dq6_A 292 LESFLEYLESNIDFAIKYINENMPKLKVRKP-----------------------EGTYLLWVDFSALGLS---------- 338 (391)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCTTSEECCC-----------------------SBSSEEEEECGGGCCC----------
T ss_pred HHHHHHHHHHHHHHHHHHHHhhCCCCEecCC-----------------------CccEEEEEEhhhcCCC----------
Confidence 556667777788889998987 789888751 1112223555321221
Q ss_pred HHHHHHHHHhhcCCCcceEEEEeee----CcEEEEEecCCCCChhHHHHHHHHHHHHH
Q psy2480 268 LNSWLGQILQRDVPSVSLNLTETAA----FGTVLRICPFECSSGGDYESFLVCLDAQV 321 (337)
Q Consensus 268 LNswLgqiL~~~~~~~~~~v~et~~----~G~~LRfcplnp~T~edI~~~v~~L~~~~ 321 (337)
...+.+.|.+... +.+..... ++.++|+|+- .+.++|++.++.|++.+
T Consensus 339 -~~~~~~~l~~~~g---i~v~~g~~~~~~~~~~iRis~~--~~~~~i~~~l~~l~~~l 390 (391)
T 4dq6_A 339 -DEELESILVQKGK---VALNQGNSFGIGGSGYQRINLA--CPRSMLEEALIRIKNAI 390 (391)
T ss_dssp -HHHHHHHHHHTTC---EECEEGGGGCTTCTTEEEEECC--SCHHHHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHhCC---EEeeCchhhCCCCCCeEEEEEc--CCHHHHHHHHHHHHHHh
Confidence 1123344444322 55554332 2368999987 36889999999988754
No 73
>1w23_A Phosphoserine aminotransferase; pyridoxal-5'-phosphate; HET: PGE PLP EPE; 1.08A {Bacillus alcalophilus} SCOP: c.67.1.4 PDB: 2bhx_A* 2bi1_A* 2bi2_A* 2bi3_A* 2bi5_A* 2bi9_A* 2bia_A* 2bie_A* 2big_A*
Probab=80.83 E-value=6.3 Score=35.63 Aligned_cols=98 Identities=9% Similarity=-0.056 Sum_probs=57.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhCCCe-EEeecCCCCCCcceeeeccccCccccccccce-eEEEEecCCCCCCCCCcchh
Q psy2480 188 GIQDILTFNFSLVESIRQKLSEYPCL-RILSHGPVSGLGLKEVTSQYLPVQTILESVQS-CVVFQFVPKDAGWGPVPAYY 265 (337)
Q Consensus 188 ~i~~~I~~t~~La~~~~e~L~~~p~L-eiL~~~~waglg~v~~~~~~~~~~~~~~~~ls-vVvFRy~P~~~~~e~~~~y~ 265 (337)
++.++.++..+.++.+.+.|++.+++ ....+ + +...+ .+.|++. ... ..
T Consensus 259 ~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~-~--------------------~~~~~~~~~~~~~-~~~-------~~ 309 (360)
T 1w23_A 259 GAEAIAKQNEEKAKIIYDTIDESNGFYVGHAE-K--------------------GSRSLMNVTFNLR-NEE-------LN 309 (360)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTTTSSEESSC-G--------------------GGBCSSEEEEECS-SHH-------HH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHccCcccccCC-c--------------------hhccCcEEEEEcC-CCc-------cH
Confidence 45667778888999999999988764 43310 0 11234 6777762 110 01
Q ss_pred hHHHHHHHHHHhhcCCCcceEEEEeeeCcEEEEEecCCCCChhHHHHHHHHHHHHHh
Q psy2480 266 DKLNSWLGQILQRDVPSVSLNLTETAAFGTVLRICPFECSSGGDYESFLVCLDAQVY 322 (337)
Q Consensus 266 D~LNswLgqiL~~~~~~~~~~v~et~~~G~~LRfcplnp~T~edI~~~v~~L~~~~~ 322 (337)
++ +.+.|.+. ++.+........++|+|+-...+.+|++++++.|++.++
T Consensus 310 ~~----~~~~l~~~----gi~~~~~~~~~~~iRis~~~~~~~~~i~~~~~~l~~~~~ 358 (360)
T 1w23_A 310 QQ----FLAKAKEQ----GFVGLNGHRSVGGCRASIYNAVPIDACIALRELMIQFKE 358 (360)
T ss_dssp HH----HHHHHHHT----TEESCBCCTTTCSEEEECCTTSCHHHHHHHHHHHHHHHH
T ss_pred HH----HHHHHHHC----CeeeecCCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHh
Confidence 11 22233322 232221111134799999877789999999999987653
No 74
>4ffc_A 4-aminobutyrate aminotransferase (GABT); structural genomics, niaid, national institute of allergy AN infectious diseases; HET: LLP; 1.80A {Mycobacterium abscessus}
Probab=80.50 E-value=11 Score=36.12 Aligned_cols=42 Identities=14% Similarity=0.232 Sum_probs=32.7
Q ss_pred ceEEEEeeeCcEEEEEecCCCCChhHHHHHHHHHHHHHhhhh
Q psy2480 284 SLNLTETAAFGTVLRICPFECSSGGDYESFLVCLDAQVYSGS 325 (337)
Q Consensus 284 ~~~v~et~~~G~~LRfcplnp~T~edI~~~v~~L~~~~~il~ 325 (337)
++.+......+.++||+|--..|.++|+++++.|++.+..+.
T Consensus 409 Gv~v~~~~~~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~~~ 450 (453)
T 4ffc_A 409 GVLILTCGTFGNVIRLLPPLVIGDDLLDEGITALSDIIRAKA 450 (453)
T ss_dssp TEECCEECTTSCEEEECCCTTCCHHHHHHHHHHHHHHHHHHC
T ss_pred CCEEecCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 355555444567999998777799999999999999877653
No 75
>3dxv_A Alpha-amino-epsilon-caprolactam racemase; fold-TYPE1, pyridoxal-5'-phosphate dependent racemase, pyrid phosphate, isomerase; HET: PLP; 2.21A {Achromobacter obae} PDB: 2zuk_A* 3dxw_A*
Probab=80.18 E-value=22 Score=33.45 Aligned_cols=42 Identities=24% Similarity=0.122 Sum_probs=32.9
Q ss_pred eEEEEeeeCcEEEEEecCCCCChhHHHHHHHHHHHHHhhhhc
Q psy2480 285 LNLTETAAFGTVLRICPFECSSGGDYESFLVCLDAQVYSGSQ 326 (337)
Q Consensus 285 ~~v~et~~~G~~LRfcplnp~T~edI~~~v~~L~~~~~il~~ 326 (337)
+.+......+.++|++|--..|.++++++++.|++.+..+..
T Consensus 386 v~v~~~~~~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~~~~ 427 (439)
T 3dxv_A 386 LVVYYVGMNGNVLEFTPPLTITETDIHKALDLLDRAFSELSA 427 (439)
T ss_dssp EECEEESTTSCEEEECCCTTCCHHHHHHHHHHHHHHHHTGGG
T ss_pred cEEeecCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHhc
Confidence 555554445579999987667999999999999998887754
No 76
>3tqx_A 2-amino-3-ketobutyrate coenzyme A ligase; energy metabolism, transferase; HET: PLP; 2.30A {Coxiella burnetii}
Probab=80.17 E-value=7.8 Score=35.45 Aligned_cols=96 Identities=4% Similarity=0.023 Sum_probs=60.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhCCCeEEeecCCCCCCcceeeeccccCccccccccceeEEEEecCCCCCCCCCcchhhH
Q psy2480 188 GIQDILTFNFSLVESIRQKLSEYPCLRILSHGPVSGLGLKEVTSQYLPVQTILESVQSCVVFQFVPKDAGWGPVPAYYDK 267 (337)
Q Consensus 188 ~i~~~I~~t~~La~~~~e~L~~~p~LeiL~~~~waglg~v~~~~~~~~~~~~~~~~lsvVvFRy~P~~~~~e~~~~y~D~ 267 (337)
.+.++.++..+.++.+.+.+++. +++++. ..-+.+.|++. .+. .
T Consensus 296 ~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~------------------------~~~~~~~~~~~-~~~-------~--- 339 (399)
T 3tqx_A 296 EGPQLRKQLQENSRYFRAGMEKL-GFQLVP------------------------GNHPIIPVMLG-DAQ-------L--- 339 (399)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHH-TCCBCC------------------------CSSSEEEEEEE-CHH-------H---
T ss_pred ccHHHHHHHHHHHHHHHHHHHHc-CCCcCC------------------------CCCCEEEEEeC-CHH-------H---
Confidence 35667777788888888888876 455442 33445566652 110 0
Q ss_pred HHHHHHHHHhhcCCCcceEEEEee----eCc-EEEEEecCCCCChhHHHHHHHHHHHHHhhh
Q psy2480 268 LNSWLGQILQRDVPSVSLNLTETA----AFG-TVLRICPFECSSGGDYESFLVCLDAQVYSG 324 (337)
Q Consensus 268 LNswLgqiL~~~~~~~~~~v~et~----~~G-~~LRfcplnp~T~edI~~~v~~L~~~~~il 324 (337)
...+.+.|.+. ++.+.... ..| .++|+|+-...+.+||+++++.|++.+..+
T Consensus 340 -~~~~~~~l~~~----gi~v~~~~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~ 396 (399)
T 3tqx_A 340 -ATNMADHLLQE----GIYVVGFSYPVVPMGKARIRVQMSAVHTQQQLDRAIEAFGQVGKKL 396 (399)
T ss_dssp -HHHHHHHHHHT----TEECCEECTTTSCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHHHT
T ss_pred -HHHHHHHHHHC----CCEEeeeCCCCCCCCCceEEEEeecCCCHHHHHHHHHHHHHHHHHh
Confidence 12333444442 24444332 223 699999877679999999999999987765
No 77
>2gb3_A Aspartate aminotransferase; TM1698, structural genomics, PSI structure initiative, joint center for structural genomics; HET: LLP; 2.50A {Thermotoga maritima} SCOP: c.67.1.1
Probab=79.53 E-value=15 Score=34.15 Aligned_cols=110 Identities=11% Similarity=-0.012 Sum_probs=63.2
Q ss_pred hHHHHhh--ChhhHHHHHHHHHHHHHHHHHHHhhCCCeEE-eecCCCCCCcceeeeccccCccccccccceeEEEEecCC
Q psy2480 178 WTTLKSM--GQTGIQDILTFNFSLVESIRQKLSEYPCLRI-LSHGPVSGLGLKEVTSQYLPVQTILESVQSCVVFQFVPK 254 (337)
Q Consensus 178 W~~Lq~L--G~d~i~~~I~~t~~La~~~~e~L~~~p~Lei-L~~~~waglg~v~~~~~~~~~~~~~~~~lsvVvFRy~P~ 254 (337)
+.....+ |.+.+.++.+...+.++.+.+.|++. ++++ .. + ..-..+.+++.
T Consensus 283 ~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~--~---------------------~~~~~~~~~~~-- 336 (409)
T 2gb3_A 283 IGSVGLLNLDDSFFDFVRETYRERVETVLKKLEEH-GLKRFTK--P---------------------SGAFYITAELP-- 336 (409)
T ss_dssp HHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHHT-TCCCBCC--C---------------------SBSSEEEEECS--
T ss_pred HHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHc-CceeeeC--C---------------------CeeEEEEEEeC--
Confidence 3334444 44556666777788888999998887 6665 32 1 11112223442
Q ss_pred CCCCCCCcchhhHHHHHHHHHHhhcC--CCcceEEEEeee-------CcEEEEEecCCCCChhHHHHHHHHHHHHHhhhh
Q psy2480 255 DAGWGPVPAYYDKLNSWLGQILQRDV--PSVSLNLTETAA-------FGTVLRICPFECSSGGDYESFLVCLDAQVYSGS 325 (337)
Q Consensus 255 ~~~~e~~~~y~D~LNswLgqiL~~~~--~~~~~~v~et~~-------~G~~LRfcplnp~T~edI~~~v~~L~~~~~il~ 325 (337)
+.+ ...+.+.|.+.. ..-++.+..... ++.++|+|+- .+.++|+++++.|++.+..+.
T Consensus 337 ~~~-----------~~~l~~~l~~~~~~~~~gi~v~~g~~f~~~~~~~~~~iRis~~--~~~e~i~~~~~~l~~~l~~~~ 403 (409)
T 2gb3_A 337 VED-----------AEEFARWMLTDFNMDGETTMVAPLRGFYLTPGLGKKEIRIACV--LEKDLLSRAIDVLMEGLKMFC 403 (409)
T ss_dssp SSC-----------HHHHHHHHHHSCCBTTEEEECEEGGGGCSSTTTTSSEEEEECC--SCHHHHHHHHHHHHHHHHHHH
T ss_pred CCC-----------HHHHHHHHHhccccccCcEEEeCchHhCCCCCCCCCEEEEEeC--CCHHHHHHHHHHHHHHHHHhh
Confidence 211 112334444320 001355554322 2459999977 578999999999998887664
Q ss_pred c
Q psy2480 326 Q 326 (337)
Q Consensus 326 ~ 326 (337)
.
T Consensus 404 ~ 404 (409)
T 2gb3_A 404 S 404 (409)
T ss_dssp C
T ss_pred h
Confidence 4
No 78
>3ftb_A Histidinol-phosphate aminotransferase; structural genomics, PSI, MCSG, protein structure initiative; 2.00A {Clostridium acetobutylicum} SCOP: c.67.1.0
Probab=79.37 E-value=24 Score=31.65 Aligned_cols=93 Identities=12% Similarity=0.122 Sum_probs=58.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhCCCeE-EeecCCCCCCcceeeeccccCccccccccceeEEEEecCCCCCCCCCcchh
Q psy2480 187 TGIQDILTFNFSLVESIRQKLSEYPCLR-ILSHGPVSGLGLKEVTSQYLPVQTILESVQSCVVFQFVPKDAGWGPVPAYY 265 (337)
Q Consensus 187 d~i~~~I~~t~~La~~~~e~L~~~p~Le-iL~~~~waglg~v~~~~~~~~~~~~~~~~lsvVvFRy~P~~~~~e~~~~y~ 265 (337)
+.+.++.+..-+.++.+.+.+++.|+++ +.. ..-+.+.|++.. .+ .
T Consensus 263 ~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~------------------------~~~~~~~~~~~~--~~-------~ 309 (361)
T 3ftb_A 263 NYIEESLLWIKKERKRFIEELNKIGFIKRVFS------------------------PHANFVLCRLEN--IS-------G 309 (361)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHSSSEEEEEC------------------------CSSSEEEEEESS--SC-------H
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCCceecC------------------------CCCeEEEEEcCC--CC-------H
Confidence 3455667777788899999999999998 654 223345566632 11 0
Q ss_pred hHHHHHHHHHHhhcCCCcceEEEEeee----CcEEEEEecCCCCChhHHHHHHHHHHHHHhh
Q psy2480 266 DKLNSWLGQILQRDVPSVSLNLTETAA----FGTVLRICPFECSSGGDYESFLVCLDAQVYS 323 (337)
Q Consensus 266 D~LNswLgqiL~~~~~~~~~~v~et~~----~G~~LRfcplnp~T~edI~~~v~~L~~~~~i 323 (337)
+ .+.+.|.+. ++.+..... ++.++|+++- +.++++.+++.|++..+.
T Consensus 310 ~----~l~~~l~~~----gi~v~~g~~~~~~~~~~iRis~~---~~~~~~~l~~~l~~~~~~ 360 (361)
T 3ftb_A 310 E----KLYDSLLKE----DIVIRRCCNFIGLDDSFVRFAIK---DEKKNTKFLRALKGVENN 360 (361)
T ss_dssp H----HHHHHHHTT----TEECEECTTSTTCCTTEEEEECC---CHHHHHHHHHHHHHHHHT
T ss_pred H----HHHHHHHHC----CeEEeeCccCCCCCCCEEEEEcC---CHHHHHHHHHHHHHHHhc
Confidence 1 233444332 355554432 2359999975 778888888888876543
No 79
>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A*
Probab=78.85 E-value=13 Score=34.08 Aligned_cols=99 Identities=7% Similarity=-0.048 Sum_probs=58.3
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhh-CCCeEEeecCCCCCCcceeeeccccCccccccccceeE-EEEecCCCCCCCCCcch
Q psy2480 187 TGIQDILTFNFSLVESIRQKLSE-YPCLRILSHGPVSGLGLKEVTSQYLPVQTILESVQSCV-VFQFVPKDAGWGPVPAY 264 (337)
Q Consensus 187 d~i~~~I~~t~~La~~~~e~L~~-~p~LeiL~~~~waglg~v~~~~~~~~~~~~~~~~lsvV-vFRy~P~~~~~e~~~~y 264 (337)
+.+.++.+..-+.++.+.+.+++ .|+++++. ..-+.+ .+++...+.+
T Consensus 290 ~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~------------------------~~~~~~~~~~~~~~~~~------- 338 (399)
T 1c7n_A 290 KWLDGCIKVIDKNQRIVKDFFEVNHPEIKAPL------------------------IEGTYLQWIDFRALKMD------- 338 (399)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCTTSBCCC------------------------CSBSSEEEEECGGGCCC-------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhCCCCeEec------------------------CCceEEEEEEcccCCCC-------
Confidence 34455566667788889999988 78887654 112222 3455321111
Q ss_pred hhHHHHHHHHHHhhcCCCcceEEEEeee----CcEEEEEecCCCCChhHHHHHHHHHHHHHhhhh
Q psy2480 265 YDKLNSWLGQILQRDVPSVSLNLTETAA----FGTVLRICPFECSSGGDYESFLVCLDAQVYSGS 325 (337)
Q Consensus 265 ~D~LNswLgqiL~~~~~~~~~~v~et~~----~G~~LRfcplnp~T~edI~~~v~~L~~~~~il~ 325 (337)
...+.+.|.+.. ++.+..... ...++|+|+-.+ .++|++.++.|++.+..+.
T Consensus 339 ----~~~~~~~l~~~~---gi~v~~g~~~~~~~~~~iRis~~~~--~~~l~~~l~~l~~~l~~~~ 394 (399)
T 1c7n_A 339 ----HKAMEEFMIHKA---QIFFDEGYIFGDGGIGFERINLAAP--SSVIQESLERLNKALKDLK 394 (399)
T ss_dssp ----HHHHHHHHHHTT---CCCCEEGGGGCGGGTTEEEEECCSC--HHHHHHHHHHHHHHHHHHC
T ss_pred ----HHHHHHHHHHhC---CEEEeCccccCCCCCCeEEEEeccC--HHHHHHHHHHHHHHHHHHH
Confidence 112334443211 133444332 235899999765 6889999999988877654
No 80
>2vi8_A Serine hydroxymethyltransferase; SHMT, E53Q, FTHF, enzyme memory, pyridoxal phosphate, one-carbon metabolism, PLP-dependent enzymes; HET: PLP; 1.67A {Bacillus stearothermophilus} PDB: 2vi9_A* 2via_A* 2vib_A* 1kkj_A* 1kkp_A* 1kl1_A* 1kl2_A* 1yjs_A* 2w7f_A* 2w7d_A* 2w7e_A* 2w7g_A* 2w7h_A* 1yjz_A* 1yjy_A* 2vgu_A* 2vgs_A* 2vgt_A* 2vgv_A* 2vgw_A* ...
Probab=78.34 E-value=16 Score=33.43 Aligned_cols=101 Identities=6% Similarity=0.067 Sum_probs=62.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhCCCeEEeecCCCCCCcceeeeccccCccccccccceeEEEEecCCCCCCCCCcchhh
Q psy2480 187 TGIQDILTFNFSLVESIRQKLSEYPCLRILSHGPVSGLGLKEVTSQYLPVQTILESVQSCVVFQFVPKDAGWGPVPAYYD 266 (337)
Q Consensus 187 d~i~~~I~~t~~La~~~~e~L~~~p~LeiL~~~~waglg~v~~~~~~~~~~~~~~~~lsvVvFRy~P~~~~~e~~~~y~D 266 (337)
+.+-+++++..+.++.+.+.|++. +++++.+ +...+.+.+++.+.+.+ .+
T Consensus 276 ~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~----------------------~~~~~~~~~~~~~~~~~-------~~ 325 (405)
T 2vi8_A 276 DDFKAYAKRVVDNAKRLASALQNE-GFTLVSG----------------------GTDNHLLLVDLRPQQLT-------GK 325 (405)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHT-TCEEGGG----------------------SCSSSEEEEECGGGTCC-------HH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHhC-CCeEecC----------------------CCCceEEEEEccCCCCC-------HH
Confidence 455677888888999999999988 7887651 12245566676432211 11
Q ss_pred HHHHHHHHHHhhcCCCcceEEEEee-------e-CcEEEEEecCC----CCChhHHHHHHHHHHHHHhhhh
Q psy2480 267 KLNSWLGQILQRDVPSVSLNLTETA-------A-FGTVLRICPFE----CSSGGDYESFLVCLDAQVYSGS 325 (337)
Q Consensus 267 ~LNswLgqiL~~~~~~~~~~v~et~-------~-~G~~LRfcpln----p~T~edI~~~v~~L~~~~~il~ 325 (337)
. +.+.|.+. ++.+.... . .+-++|+|+-. ..+.+|++++++.|++.+..+.
T Consensus 326 ~----~~~~l~~~----gi~v~~g~~~~~~~~~~~~~~iRis~~~~~~~~~~~~~i~~~~~~l~~~~~~~~ 388 (405)
T 2vi8_A 326 T----AEKVLDEV----GITVNKNTIPYDPESPFVTSGIRIGTAAVTTRGFGLEEMDEIAAIIGLVLKNVG 388 (405)
T ss_dssp H----HHHHHHHH----TEECEEECCTTCSSCTTTCSEEEEECHHHHHTTCCHHHHHHHHHHHHHHHTCTT
T ss_pred H----HHHHHHHc----CceeccCcCccccCCCCCCCceEEeeeeeeecCCCHHHHHHHHHHHHHHHhccc
Confidence 2 22333221 24444321 1 22379999765 2379999999999998876553
No 81
>3a9z_A Selenocysteine lyase; PLP, cytoplasm, pyridoxal phosphate, transferase; HET: PLP SLP; 1.55A {Rattus norvegicus} PDB: 3a9x_A* 3a9y_A* 3gzd_A* 3gzc_A* 2hdy_A*
Probab=78.32 E-value=3.5 Score=38.66 Aligned_cols=34 Identities=9% Similarity=0.077 Sum_probs=29.0
Q ss_pred EEEEEecCCCCChhHHHHHHHHHHHHHhhhhccc
Q psy2480 295 TVLRICPFECSSGGDYESFLVCLDAQVYSGSQGL 328 (337)
Q Consensus 295 ~~LRfcplnp~T~edI~~~v~~L~~~~~il~~t~ 328 (337)
.++|+++-...|.+|++++++.|++.+..+..+|
T Consensus 399 ~~iRis~~~~~t~eei~~~~~~l~~~~~~~~~~~ 432 (432)
T 3a9z_A 399 NAVRLSVGRSTTRAEVDLIVQDLKQAVNQLEGPV 432 (432)
T ss_dssp TEEEEECCTTCCHHHHHHHHHHHHHHHHHHHSCC
T ss_pred ceEEEEcCCCCCHHHHHHHHHHHHHHHHHhcCCC
Confidence 5899998766689999999999999988776654
No 82
>4a6r_A Omega transaminase; transferase, PLP-binding enzyme, transaminase fold type I; HET: TA8; 1.35A {Chromobacterium violaceum} PDB: 4a6t_A* 4a6u_A 4a72_A* 4ah3_A*
Probab=78.10 E-value=10 Score=36.27 Aligned_cols=33 Identities=12% Similarity=0.107 Sum_probs=27.7
Q ss_pred cEEEEEecCCCCChhHHHHHHHHHHHHHhhhhc
Q psy2480 294 GTVLRICPFECSSGGDYESFLVCLDAQVYSGSQ 326 (337)
Q Consensus 294 G~~LRfcplnp~T~edI~~~v~~L~~~~~il~~ 326 (337)
|-++||+|--..|.++++++++.|++.+..+..
T Consensus 419 g~~iRi~~~~~~t~e~i~~~l~~l~~~l~~~~~ 451 (459)
T 4a6r_A 419 GDHIVSAPPLVMTRAEVDEMLAVAERCLEEFEQ 451 (459)
T ss_dssp TTEEEECCCTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 368999987777999999999999988876654
No 83
>3a2b_A Serine palmitoyltransferase; vitamin B6-dependent enzyme fold type I, acyltransferase, PY phosphate; HET: PLP; 2.30A {Sphingobacterium multivorum}
Probab=77.47 E-value=8.8 Score=35.42 Aligned_cols=93 Identities=6% Similarity=0.118 Sum_probs=58.0
Q ss_pred HHHHHHHHHHHHHHHHHhhCCCeEEeecCCCCCCcceeeeccccCccccccccceeEEEEecCCCCCCCCCcchhhHHHH
Q psy2480 191 DILTFNFSLVESIRQKLSEYPCLRILSHGPVSGLGLKEVTSQYLPVQTILESVQSCVVFQFVPKDAGWGPVPAYYDKLNS 270 (337)
Q Consensus 191 ~~I~~t~~La~~~~e~L~~~p~LeiL~~~~waglg~v~~~~~~~~~~~~~~~~lsvVvFRy~P~~~~~e~~~~y~D~LNs 270 (337)
++.++.-+.++.+.+.|++. +++++. +..+.+.+++ |.+. + ..
T Consensus 295 ~~~~~~~~~~~~l~~~L~~~-g~~~~~------------------------~~g~~~~~~~-~~~~---------~--~~ 337 (398)
T 3a2b_A 295 EHIEKLWKNTDYAKAQLLDH-GFDLGA------------------------TESPILPIFI-RSNE---------K--TF 337 (398)
T ss_dssp HHHHHHHHHHHHHHHHHHHT-TCCBCS------------------------CCSSEEEEEC-CCHH---------H--HH
T ss_pred HHHHHHHHHHHHHHHHHHhc-CCCcCC------------------------CCCCEEEEEc-CCHH---------H--HH
Confidence 55566667788888888876 665543 1234555665 2111 1 12
Q ss_pred HHHHHHhhcCCCcceEEEEeee-----CcEEEEEecCCCCChhHHHHHHHHHHHHHhhh
Q psy2480 271 WLGQILQRDVPSVSLNLTETAA-----FGTVLRICPFECSSGGDYESFLVCLDAQVYSG 324 (337)
Q Consensus 271 wLgqiL~~~~~~~~~~v~et~~-----~G~~LRfcplnp~T~edI~~~v~~L~~~~~il 324 (337)
.+.+.|.+. ++.+..... +..++|+|+-...+.++++++++.|++.+..+
T Consensus 338 ~l~~~l~~~----gi~v~~~~~~~~~~~~~~iRis~~~~~~~e~i~~~~~~l~~~l~~~ 392 (398)
T 3a2b_A 338 WVTKMLQDD----GVFVNPVVSPAVPAEESLIRFSLMATHTYDQIDEAIEKMVKVFKQA 392 (398)
T ss_dssp HHHHHHHHT----TEECEEECTTTSCGGGCEEEEECCTTCCHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHC----CcEEEeeCCCCCCCCCceEEEEEeCCCCHHHHHHHHHHHHHHHHHh
Confidence 233444433 255554432 23689999987779999999999999887654
No 84
>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae}
Probab=77.38 E-value=13 Score=33.80 Aligned_cols=97 Identities=8% Similarity=0.024 Sum_probs=58.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhh-CCCeEEeecCCCCCCcceeeeccccCccccccccceeEEEEecCCCCCCCCCcchh
Q psy2480 187 TGIQDILTFNFSLVESIRQKLSE-YPCLRILSHGPVSGLGLKEVTSQYLPVQTILESVQSCVVFQFVPKDAGWGPVPAYY 265 (337)
Q Consensus 187 d~i~~~I~~t~~La~~~~e~L~~-~p~LeiL~~~~waglg~v~~~~~~~~~~~~~~~~lsvVvFRy~P~~~~~e~~~~y~ 265 (337)
+.+.++.+..-+.++.+.+.+++ .|++++... .....+.+++...+.+ .+.
T Consensus 274 ~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~----~~~- 325 (377)
T 3fdb_A 274 DFLNQEVAYLKNNHDFLLHEIPKRIPGAKITPM-----------------------QATYLMWIDFRDTTIE----GSP- 325 (377)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSTTCEECCC-----------------------SBCSEEEEECTTSCCC----SCH-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhCCCceEecC-----------------------CeeEEEEEECcccCCC----HHH-
Confidence 34556677778888899999988 889888751 1122233555322222 111
Q ss_pred hHHHHHHHHHHhhcCCCcceEEEEeee----CcEEEEEecCCCCChhHHHHHHHHHHHHHhh
Q psy2480 266 DKLNSWLGQILQRDVPSVSLNLTETAA----FGTVLRICPFECSSGGDYESFLVCLDAQVYS 323 (337)
Q Consensus 266 D~LNswLgqiL~~~~~~~~~~v~et~~----~G~~LRfcplnp~T~edI~~~v~~L~~~~~i 323 (337)
.+.+.+.. ++.+..... .+.++|+|+-. +.++|++.++.|++.+..
T Consensus 326 -------~~~l~~~~---gi~v~~g~~~~~~~~~~~Ris~~~--~~e~i~~~l~~l~~~l~~ 375 (377)
T 3fdb_A 326 -------SEFFIEKA---KVAMNDGAWFGEDGTGFCRLNFAT--SREVLEEAIDRMAKAVSH 375 (377)
T ss_dssp -------HHHHHHHH---CEECEEGGGGCGGGTTEEEEECCS--CHHHHHHHHHHHHHHHTT
T ss_pred -------HHHHHHhC---CEEecCChhccCCCCCEEEEEeCC--CHHHHHHHHHHHHHHHhh
Confidence 12222221 244544432 23699999875 789999999999887654
No 85
>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans}
Probab=77.33 E-value=13 Score=34.89 Aligned_cols=96 Identities=11% Similarity=0.081 Sum_probs=56.5
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhCCCeEEeecCCCCCCcceeeeccccCccccccccceeEEEEecCCCCCCCCCcchhh
Q psy2480 187 TGIQDILTFNFSLVESIRQKLSEYPCLRILSHGPVSGLGLKEVTSQYLPVQTILESVQSCVVFQFVPKDAGWGPVPAYYD 266 (337)
Q Consensus 187 d~i~~~I~~t~~La~~~~e~L~~~p~LeiL~~~~waglg~v~~~~~~~~~~~~~~~~lsvVvFRy~P~~~~~e~~~~y~D 266 (337)
+.+.++.+..-+.++.+.+.+++.|+++++.. ...-.+.+++...+.+. +
T Consensus 320 ~~~~~~~~~~~~~~~~l~~~L~~~~~i~~~~~-----------------------~~~~~~~v~~~~~~~~~-------~ 369 (421)
T 3l8a_A 320 PWLEELKTVIEGNIKLVIKELEAKTKIKVMEP-----------------------EGTYLVWLDFSAYAIAQ-------P 369 (421)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCSCEEECC-----------------------SBSSEEEEECGGGTCCT-------T
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCceEeCC-----------------------CeeEEEEEeccccCCCH-------H
Confidence 33456666677788888888888888888751 11112224443322220 1
Q ss_pred HHHHHHHHHHhhcCCCcceEEEEeee----CcEEEEEecCCCCChhHHHHHHHHHHHHH
Q psy2480 267 KLNSWLGQILQRDVPSVSLNLTETAA----FGTVLRICPFECSSGGDYESFLVCLDAQV 321 (337)
Q Consensus 267 ~LNswLgqiL~~~~~~~~~~v~et~~----~G~~LRfcplnp~T~edI~~~v~~L~~~~ 321 (337)
+ +.+.|.+.. ++.+..... +..++|+++-. +.++|++.++.|++.+
T Consensus 370 ~----l~~~l~~~~---gi~v~~g~~f~~~~~~~iRi~~~~--~~~~i~~~l~~l~~~l 419 (421)
T 3l8a_A 370 Q----LSEKLQNEA---KVVLNDGAHFGKEGKYFARLNVAT--PKNTVQEALSRIISVF 419 (421)
T ss_dssp H----HHHHHHHTT---CEECEEGGGGCGGGTTEEEEECCS--CHHHHHHHHHHHHHHC
T ss_pred H----HHHHHHHhC---CEEEECchhhCCCCCCEEEEEecC--CHHHHHHHHHHHHHHH
Confidence 1 223343222 255554332 23699999773 7899999999998754
No 86
>3fkd_A L-threonine-O-3-phosphate decarboxylase; structural genomic, , structural genomics, PSI-2, protein structure initiative; 2.50A {Porphyromonas gingivalis}
Probab=76.67 E-value=11 Score=34.11 Aligned_cols=98 Identities=8% Similarity=0.027 Sum_probs=56.2
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCCeEEeecCCCCCCcceeeeccccCccccccccceeEEEEecCCCCCCCCCcchhhHHH
Q psy2480 190 QDILTFNFSLVESIRQKLSEYPCLRILSHGPVSGLGLKEVTSQYLPVQTILESVQSCVVFQFVPKDAGWGPVPAYYDKLN 269 (337)
Q Consensus 190 ~~~I~~t~~La~~~~e~L~~~p~LeiL~~~~waglg~v~~~~~~~~~~~~~~~~lsvVvFRy~P~~~~~e~~~~y~D~LN 269 (337)
.+.++...+.++.+.+.+++.|++++.. ...+.+.+++... + .+
T Consensus 247 ~~~~~~~~~~~~~l~~~L~~~~~~~~~~------------------------~~~~~~~~~~~~~--~-------~~--- 290 (350)
T 3fkd_A 247 TLPIRKWQRNTVDFITALNRLDGVEVHP------------------------SGTTFFLLRLKKG--T-------AA--- 290 (350)
T ss_dssp CCCHHHHHHHHHHHHHHHHHSTTEEECC------------------------CSSSEEEEEESSS--C-------HH---
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCcEECC------------------------CCCcEEEEECCCC--C-------HH---
Confidence 3444444588899999999999998753 2233444565322 1 11
Q ss_pred HHHHHHHhhcCCCcceEEEEeee----CcEEEEEecCCCCChhHHHHHHHHHHHHHhhhhccccc
Q psy2480 270 SWLGQILQRDVPSVSLNLTETAA----FGTVLRICPFECSSGGDYESFLVCLDAQVYSGSQGLFH 330 (337)
Q Consensus 270 swLgqiL~~~~~~~~~~v~et~~----~G~~LRfcplnp~T~edI~~~v~~L~~~~~il~~t~~~ 330 (337)
.+.+.|.+.. ++.+..... ++.++|+|+- +.++++.+++.|++....-+.+=.|
T Consensus 291 -~l~~~L~~~~---gi~v~~g~~f~~~~~~~iRis~~---~~~~~~~l~~al~~~~~~~~~~~~~ 348 (350)
T 3fkd_A 291 -ELKKYMLEEY---NMLIRDASNFRGLDESYVRITTQ---RPAQNQLFIKALETFLEKYEGHHHH 348 (350)
T ss_dssp -HHHHHHHHTT---CEECEECTTSTTCCTTEEEEECC---CHHHHHHHHHHHHHHHTC-------
T ss_pred -HHHHHHHHHC---CEEEEeCccCCCCCCCEEEEEcC---CHHHHHHHHHHHHHHHHHhcccccc
Confidence 2334444322 244544432 2459999964 7889999999999887766554333
No 87
>2w8t_A SPT, serine palmitoyltransferase; HET: LLP; 1.25A {Sphingomonas paucimobilis} PDB: 2w8u_A* 2w8w_A* 2xbn_A* 2w8j_A* 2w8v_A* 2jg2_A* 2jgt_A 2x8u_A*
Probab=76.62 E-value=14 Score=34.90 Aligned_cols=95 Identities=13% Similarity=0.053 Sum_probs=60.1
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCCeEEeecCCCCCCcceeeeccccCccccccc-cceeEEEEecCCCCCCCCCcchhhHH
Q psy2480 190 QDILTFNFSLVESIRQKLSEYPCLRILSHGPVSGLGLKEVTSQYLPVQTILES-VQSCVVFQFVPKDAGWGPVPAYYDKL 268 (337)
Q Consensus 190 ~~~I~~t~~La~~~~e~L~~~p~LeiL~~~~waglg~v~~~~~~~~~~~~~~~-~lsvVvFRy~P~~~~~e~~~~y~D~L 268 (337)
.++.++..+.++.+.+.|++. ++++.. +. ..+.+.|++. .. ..
T Consensus 315 ~~~~~~~~~~~~~l~~~L~~~-g~~~~~-----------------------~~~~~~~~~~~~~-~~-------~~---- 358 (427)
T 2w8t_A 315 HEKRERLWSNARALHGGLKAM-GFRLGT-----------------------ETCDSAIVAVMLE-DQ-------EQ---- 358 (427)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH-TCEESC-----------------------SSCCSSEEEEEES-SH-------HH----
T ss_pred HHHHHHHHHHHHHHHHHHHHc-CCcccC-----------------------CCCCCCEEEEEEC-CH-------HH----
Confidence 456677778888888888876 676653 12 3456666662 11 00
Q ss_pred HHHHHHHHhhcCCCcceEEEEeee-----CcEEEEEecCCCCChhHHHHHHHHHHHHHhhh
Q psy2480 269 NSWLGQILQRDVPSVSLNLTETAA-----FGTVLRICPFECSSGGDYESFLVCLDAQVYSG 324 (337)
Q Consensus 269 NswLgqiL~~~~~~~~~~v~et~~-----~G~~LRfcplnp~T~edI~~~v~~L~~~~~il 324 (337)
...+.+.|.+. ++.+..... +.-++|+|+-...|.+||+++++.|++.+..+
T Consensus 359 ~~~l~~~L~~~----Gi~v~~~~~~~~~~~~~~lRi~~~~~~t~e~i~~~~~~l~~~l~~~ 415 (427)
T 2w8t_A 359 AAMMWQALLDG----GLYVNMARPPATPAGTFLLRCSICAEHTPAQIQTVLGMFQAAGRAV 415 (427)
T ss_dssp HHHHHHHHHHT----TEECEEECTTTSCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHC----CeEEeeeCCCCCCCCCeEEEEEeCCCCCHHHHHHHHHHHHHHHHHh
Confidence 12233444433 355554432 23699999886669999999999999887654
No 88
>3mc6_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxyl phosphate; HET: LLP; 3.15A {Saccharomyces cerevisiae}
Probab=76.44 E-value=2.7 Score=40.64 Aligned_cols=43 Identities=21% Similarity=0.388 Sum_probs=40.4
Q ss_pred chhhHHHHHhcCchhHHHHHHHHHHHHHHHHHhhcc-CCceEEe
Q psy2480 36 ALPVWTTLKSMGQTGIQDILTFNFSLVESVRQKLSE-YPCLRIL 78 (337)
Q Consensus 36 aLplW~alQ~Lg~~~I~~ri~~Af~ls~~l~~~L~~-~~~I~il 78 (337)
.+..|.++++||.+++.+++++....++.+.+.|.+ +++++++
T Consensus 328 ~~a~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~~~~g~~~~ 371 (497)
T 3mc6_A 328 VVGCWATMVNMGENGYIESCQEIVGAAMKFKKYIQENIPDLDIM 371 (497)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCTTCEEC
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEe
Confidence 556999999999999999999999999999999999 7999988
No 89
>2bkw_A Alanine-glyoxylate aminotransferase 1; analine-glyoxylate aminotransferase, pyridoxal-5-phosphate, SAD, glycolate pathway; HET: LLP; 2.57A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=76.41 E-value=4.9 Score=36.56 Aligned_cols=98 Identities=9% Similarity=0.069 Sum_probs=57.7
Q ss_pred hHHHHHHHHHHHHHHHHHHH-hhCCCeEEeecCCCCCCcceeeeccccCccccccccceeEEEEecCCCCCCCCCcchhh
Q psy2480 188 GIQDILTFNFSLVESIRQKL-SEYPCLRILSHGPVSGLGLKEVTSQYLPVQTILESVQSCVVFQFVPKDAGWGPVPAYYD 266 (337)
Q Consensus 188 ~i~~~I~~t~~La~~~~e~L-~~~p~LeiL~~~~waglg~v~~~~~~~~~~~~~~~~lsvVvFRy~P~~~~~e~~~~y~D 266 (337)
++.+++++..++++.+.+.| ++. ++++....+ + .....+.+.|++. . . +
T Consensus 278 ~~~~~~~~~~~~~~~l~~~L~~~~-g~~~~~~~~--~----------------~~~~~~~~~~~~~-~--~--------~ 327 (385)
T 2bkw_A 278 GLHKRWDLHREMSDWFKDSLVNGL-QLTSVSRYP--S----------------NMSAHGLTAVYVA-D--P--------P 327 (385)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTTT-CCEESSCSS--S----------------TTBCSSCEEEECS-C--H--------H
T ss_pred cHHHHHHHHHHHHHHHHHHHHHhc-CceecccCc--c----------------cccCCceEEEecC-C--H--------H
Confidence 35566777788999999999 877 777763100 0 0013456777762 1 1 2
Q ss_pred HHHHHHHHHHhhcCCCcceEEEEeee---CcEEEEEecCC--C--CChhHHHHHHHHHHHHHhh
Q psy2480 267 KLNSWLGQILQRDVPSVSLNLTETAA---FGTVLRICPFE--C--SSGGDYESFLVCLDAQVYS 323 (337)
Q Consensus 267 ~LNswLgqiL~~~~~~~~~~v~et~~---~G~~LRfcpln--p--~T~edI~~~v~~L~~~~~i 323 (337)
++ .+.|.+. ++.+..... ...++|+|++. + .|.+|++++++.|++.+..
T Consensus 328 ~~----~~~l~~~----gi~v~~g~~~~~~~~~iRis~~~~~~~~~~~e~i~~~~~~l~~~~~~ 383 (385)
T 2bkw_A 328 DV----IAFLKSH----GVVIAGGIHKDIGPKYIRIGHMGVTACNKNLPYMKNCFDLIKLALQR 383 (385)
T ss_dssp HH----HHHHHHT----TEECBCCCCTTTGGGEEEECCCGGGTSSTTCTHHHHHHHHHHHHTTC
T ss_pred HH----HHHHHHC----CeEEeCCCCcccCCCEEEEEccccccccCCHHHHHHHHHHHHHHHHh
Confidence 22 2333221 233332221 23589999533 2 3899999999999887543
No 90
>3oks_A 4-aminobutyrate transaminase; ssgcid, transferase, seattle structural genomics center for infectious disease; HET: LLP; 1.80A {Mycobacterium smegmatis} PDB: 3r4t_A* 3q8n_A
Probab=76.25 E-value=21 Score=34.15 Aligned_cols=39 Identities=15% Similarity=0.176 Sum_probs=30.5
Q ss_pred ceEEEEeeeCcEEEEEecCCCCChhHHHHHHHHHHHHHh
Q psy2480 284 SLNLTETAAFGTVLRICPFECSSGGDYESFLVCLDAQVY 322 (337)
Q Consensus 284 ~~~v~et~~~G~~LRfcplnp~T~edI~~~v~~L~~~~~ 322 (337)
++.+......+.++||+|--..|.++|+++++.|++.+.
T Consensus 411 Gv~v~~~~~~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~ 449 (451)
T 3oks_A 411 GVIVLSCGTYGNVVRFLPPLSIGDDLLNEGLDVLEEVLR 449 (451)
T ss_dssp TEECEEECTTSCEEEECCCTTCCHHHHHHHHHHHHHHHH
T ss_pred CcEEecCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHh
Confidence 355555544567999998777799999999999988764
No 91
>3h14_A Aminotransferase, classes I and II; YP_167802.1, SPO258 structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Silicibacter pomeroyi dss-3}
Probab=75.62 E-value=16 Score=33.48 Aligned_cols=31 Identities=26% Similarity=0.226 Sum_probs=24.2
Q ss_pred EEEEEecCCCCChhHHHHHHHHHHHHHhhhhcc
Q psy2480 295 TVLRICPFECSSGGDYESFLVCLDAQVYSGSQG 327 (337)
Q Consensus 295 ~~LRfcplnp~T~edI~~~v~~L~~~~~il~~t 327 (337)
.++|+|+-. +.++|++.++.|++.++....+
T Consensus 355 ~~iRis~~~--~~~~i~~~l~~l~~~~~~~~~~ 385 (391)
T 3h14_A 355 GTLRFSYAR--ATADIEEGLDRLEAFMQARGEG 385 (391)
T ss_dssp GEEEEECCS--CHHHHHHHHHHHHHHHHHC---
T ss_pred CeEEEEecC--CHHHHHHHHHHHHHHHHHhccc
Confidence 599999877 6799999999999987765544
No 92
>1fc4_A 2-amino-3-ketobutyrate conenzyme A ligase; 2-amino-3-ketobutyrate COA ligase, pyridoxal phosphate, COEN transferase, structural genomics; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.4
Probab=75.50 E-value=12 Score=34.55 Aligned_cols=95 Identities=6% Similarity=-0.002 Sum_probs=58.7
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCCeEEeecCCCCCCcceeeeccccCccccccccceeEEEEecCCCCCCCCCcchhhHHH
Q psy2480 190 QDILTFNFSLVESIRQKLSEYPCLRILSHGPVSGLGLKEVTSQYLPVQTILESVQSCVVFQFVPKDAGWGPVPAYYDKLN 269 (337)
Q Consensus 190 ~~~I~~t~~La~~~~e~L~~~p~LeiL~~~~waglg~v~~~~~~~~~~~~~~~~lsvVvFRy~P~~~~~e~~~~y~D~LN 269 (337)
.++.++..+.++.+.+.|++. ++++.. ..-+.+.|++. .+. . .
T Consensus 299 ~~~~~~~~~~~~~l~~~L~~~-g~~~~~------------------------~~~~~~~~~~~-~~~-------~----~ 341 (401)
T 1fc4_A 299 SELRDRLWANARQFREQMSAA-GFTLAG------------------------ADHAIIPVMLG-DAV-------V----A 341 (401)
T ss_dssp HHHHHHHHHHHHHHHHHHHHT-TCCBCC------------------------SSSSEEEEEEE-CHH-------H----H
T ss_pred HHHHHHHHHHHHHHHHHHHHc-CCcccC------------------------CCCCEEEEEcC-ChH-------H----H
Confidence 356667778888888888877 555442 23445566662 110 0 1
Q ss_pred HHHHHHHhhcCCCcceEEEEeee-----CcEEEEEecCCCCChhHHHHHHHHHHHHHhhhh
Q psy2480 270 SWLGQILQRDVPSVSLNLTETAA-----FGTVLRICPFECSSGGDYESFLVCLDAQVYSGS 325 (337)
Q Consensus 270 swLgqiL~~~~~~~~~~v~et~~-----~G~~LRfcplnp~T~edI~~~v~~L~~~~~il~ 325 (337)
..+.+.|.+. ++.+..... +..++|+++-...+.+|++++++.|++.++.+.
T Consensus 342 ~~l~~~l~~~----gi~v~~~~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~~ 398 (401)
T 1fc4_A 342 QKFARELQKE----GIYVTGFFYPVVPKGQARIRTQMSAAHTPEQITRAVEAFTRIGKQLG 398 (401)
T ss_dssp HHHHHHHHHT----TEECCEECTTSSCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHC----CcEEeeecCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHHHHHHhC
Confidence 1233344332 244444332 236899998766789999999999999877653
No 93
>3gbx_A Serine hydroxymethyltransferase; structural genomics, IDP01011, serine hydroxymethyltransfera salmonella typhimurium.; HET: MSE; 1.80A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1dfo_A* 3g8m_A* 1eqb_A*
Probab=75.27 E-value=14 Score=34.06 Aligned_cols=103 Identities=7% Similarity=0.018 Sum_probs=61.2
Q ss_pred hChhhHHHHHHHHHHHHHHHHHHHhhCCCeEEeecCCCCCCcceeeeccccCccccccccceeEEEEecCCCCCCCCCcc
Q psy2480 184 MGQTGIQDILTFNFSLVESIRQKLSEYPCLRILSHGPVSGLGLKEVTSQYLPVQTILESVQSCVVFQFVPKDAGWGPVPA 263 (337)
Q Consensus 184 LG~d~i~~~I~~t~~La~~~~e~L~~~p~LeiL~~~~waglg~v~~~~~~~~~~~~~~~~lsvVvFRy~P~~~~~e~~~~ 263 (337)
+..+.+.++.++..+.++.+.+.|.+ .+++++.. +...+.+.+.+.+.+.+
T Consensus 282 ~~~~~~~~~~~~~~~~~~~l~~~L~~-~g~~~~~~----------------------~~~~~~~~~~~~~~~~~------ 332 (420)
T 3gbx_A 282 AMEPEFKVYQQQVAKNAKAMVEVFLN-RGYKVVSG----------------------GTENHLFLLDLVDKNLT------ 332 (420)
T ss_dssp TTSHHHHHHHHHHHHHHHHHHHHHHH-TTCEEGGG----------------------SCSSSEEEEECGGGTCC------
T ss_pred HHhHhHHHHHHHHHHHHHHHHHHHHh-cCCeeccC----------------------CCCCeEEEEEcCCCCCC------
Confidence 33456667788888899999999887 67777641 12334455555443322
Q ss_pred hhhHHHHHHHHHHhhcCCCcceEEEE-------ee-eCcEEEEEecCCC----CChhHHHHHHHHHHHHHhhh
Q psy2480 264 YYDKLNSWLGQILQRDVPSVSLNLTE-------TA-AFGTVLRICPFEC----SSGGDYESFLVCLDAQVYSG 324 (337)
Q Consensus 264 y~D~LNswLgqiL~~~~~~~~~~v~e-------t~-~~G~~LRfcplnp----~T~edI~~~v~~L~~~~~il 324 (337)
...+.+.|.+. ++.+.. .. .....+|+++-.. .++++|+++++.|++.++..
T Consensus 333 -----~~~~~~~l~~~----gi~v~~~~~~~~~~~~~~~~~iRi~~~~~~~~~~~~~~i~~~~~~l~~~l~~~ 396 (420)
T 3gbx_A 333 -----GKEADAALGRA----NITVNKNSVPNDPKSPFVTSGIRIGSPAVTRRGFKEAEVKELAGWMCDVLDNI 396 (420)
T ss_dssp -----HHHHHHHHHHT----TEECEEECCTTCSSCTTTCSEEEEECHHHHHTTCCHHHHHHHHHHHHHHHHTT
T ss_pred -----HHHHHHHHHHC----CcEeccccCCCCccccCCCcceEEecchhcccCCCHHHHHHHHHHHHHHHhCc
Confidence 11222333321 244444 11 1223599987543 26899999999998876553
No 94
>3bc8_A O-phosphoseryl-tRNA(SEC) selenium transferase; disorder-order transition, phosphate-loop, pyridoxal phospha selenocysteine synthase (SECS, sepsecs); HET: LLP; 1.65A {Mus musculus} SCOP: c.67.1.9 PDB: 3bca_A* 3bcb_A*
Probab=74.94 E-value=1.2 Score=44.67 Aligned_cols=45 Identities=24% Similarity=0.330 Sum_probs=41.9
Q ss_pred chhhHHHHHhcCchhHHHHHHHHHHHHHHHHHhhccCC---ceEEeec
Q psy2480 36 ALPVWTTLKSMGQTGIQDILTFNFSLVESVRQKLSEYP---CLRILSH 80 (337)
Q Consensus 36 aLplW~alQ~Lg~~~I~~ri~~Af~ls~~l~~~L~~~~---~I~ils~ 80 (337)
+|.+|.++.++|.+++.+.|++..++++.+.+.|.+++ ++++++.
T Consensus 301 sL~l~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~g~~~l~~ 348 (450)
T 3bc8_A 301 SLDVLITLLSLGCSGYRKLLKERKEMFVYLSTQLKKLAEAHNERLLQT 348 (450)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCBCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhcCceecCC
Confidence 49999999999999999999999999999999999999 9999943
No 95
>3i5t_A Aminotransferase; pyridoxal 5'-phosphate, PSI-2, NYSGXRC, ST genomics, protein structure initiative; HET: PLP; 2.00A {Rhodobacter sphaeroides 2}
Probab=74.51 E-value=15 Score=35.77 Aligned_cols=40 Identities=15% Similarity=0.152 Sum_probs=30.9
Q ss_pred eEEEEeeeCcEEEEEecCCCCChhHHHHHHHHHHHHHhhhhcc
Q psy2480 285 LNLTETAAFGTVLRICPFECSSGGDYESFLVCLDAQVYSGSQG 327 (337)
Q Consensus 285 ~~v~et~~~G~~LRfcplnp~T~edI~~~v~~L~~~~~il~~t 327 (337)
+.+... |-++||+|--..|.++|+++++.|++.+..+...
T Consensus 418 v~v~~~---g~~iRi~p~l~~t~e~i~~~l~~l~~~l~~~~~~ 457 (476)
T 3i5t_A 418 LIVRPL---GDLCVISPPLIISRAQIDEMVAIMRQAITEVSAA 457 (476)
T ss_dssp EECEEE---TTEEEECCCTTCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CEEEec---CCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 445442 3689999876679999999999999988776553
No 96
>3ffh_A Histidinol-phosphate aminotransferase; APC88260, listeria in CLIP11262, structural genomics, PSI-2; 2.31A {Listeria innocua} SCOP: c.67.1.0
Probab=73.90 E-value=27 Score=31.55 Aligned_cols=89 Identities=13% Similarity=0.098 Sum_probs=56.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhCCCeEEeecCCCCCCcceeeeccccCccccccccceeEEEEecCCCCCCCCCcchhh
Q psy2480 187 TGIQDILTFNFSLVESIRQKLSEYPCLRILSHGPVSGLGLKEVTSQYLPVQTILESVQSCVVFQFVPKDAGWGPVPAYYD 266 (337)
Q Consensus 187 d~i~~~I~~t~~La~~~~e~L~~~p~LeiL~~~~waglg~v~~~~~~~~~~~~~~~~lsvVvFRy~P~~~~~e~~~~y~D 266 (337)
+.+.++.+..-+.++.+.+.+++++++++.. ..-+.+.|++.. + .+
T Consensus 272 ~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~------------------------~~~~~~~~~~~~---~-------~~ 317 (363)
T 3ffh_A 272 AFIGECRTSNANGIKQYEAFAKRFEKVKLYP------------------------ANGNFVLIDLGI---E-------AG 317 (363)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCTTCEECC------------------------CCSSEEEEECSS---C-------HH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhCCCceECC------------------------CCCeEEEEECCC---C-------HH
Confidence 3455667777788899999999988888764 222345566521 1 12
Q ss_pred HHHHHHHHHHhhcCCCcceEEEEeeeC--cEEEEEecCCCCChhHHHHHHHHHHHH
Q psy2480 267 KLNSWLGQILQRDVPSVSLNLTETAAF--GTVLRICPFECSSGGDYESFLVCLDAQ 320 (337)
Q Consensus 267 ~LNswLgqiL~~~~~~~~~~v~et~~~--G~~LRfcplnp~T~edI~~~v~~L~~~ 320 (337)
+ +.+.|.+. ++.+...... +.++|+++- |.+|++.+++.|++.
T Consensus 318 ~----~~~~l~~~----gi~v~~g~~~~~~~~iRis~~---~~~~i~~~~~~l~~~ 362 (363)
T 3ffh_A 318 T----IFSYLEKN----GYITRSGAALGFPTAVRITIG---KEEDNSAVIALLEKL 362 (363)
T ss_dssp H----HHHHHHHT----TEECEETTTTTCTTEEEEECC---CHHHHHHHHHHHHHH
T ss_pred H----HHHHHHHC----CeEEEeCccCCCCCeEEEECC---CHHHHHHHHHHHHHh
Confidence 2 22333331 2445443332 359999965 899999999999864
No 97
>3euc_A Histidinol-phosphate aminotransferase 2; YP_297314.1, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 2.05A {Ralstonia eutropha JMP134} SCOP: c.67.1.0
Probab=73.63 E-value=10 Score=34.38 Aligned_cols=88 Identities=8% Similarity=0.081 Sum_probs=56.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhCCCeEEeecCCCCCCcceeeeccccCccccccccceeEEEEecCCCCCCCCCcchhhH
Q psy2480 188 GIQDILTFNFSLVESIRQKLSEYPCLRILSHGPVSGLGLKEVTSQYLPVQTILESVQSCVVFQFVPKDAGWGPVPAYYDK 267 (337)
Q Consensus 188 ~i~~~I~~t~~La~~~~e~L~~~p~LeiL~~~~waglg~v~~~~~~~~~~~~~~~~lsvVvFRy~P~~~~~e~~~~y~D~ 267 (337)
.+.++.++.-+.++.+.+.+++.|++++.. ..-+.+.+++. +
T Consensus 274 ~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~------------------------~~~~~~~~~~~----~---------- 315 (367)
T 3euc_A 274 VLDEQAAQLRAERSRVAEGMAAHGGVTVFP------------------------SAANFLLARVP----D---------- 315 (367)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTSTTCEECC------------------------CSSSEEEEECS----C----------
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCcEECC------------------------CCCeEEEEECC----C----------
Confidence 356777778888999999999999988543 22334445552 1
Q ss_pred HHHHHHHHHhhcCCCcceEEEEeee----CcEEEEEecCCCCChhHHHHHHHHHHHHH
Q psy2480 268 LNSWLGQILQRDVPSVSLNLTETAA----FGTVLRICPFECSSGGDYESFLVCLDAQV 321 (337)
Q Consensus 268 LNswLgqiL~~~~~~~~~~v~et~~----~G~~LRfcplnp~T~edI~~~v~~L~~~~ 321 (337)
...+.+.|.+. ++.+..... ...++|+++- |.+|++++++.|++.+
T Consensus 316 -~~~l~~~l~~~----gi~v~~~~~~~~~~~~~iRis~~---~~~~i~~~~~~l~~~l 365 (367)
T 3euc_A 316 -AAQTFDRLLAR----KVLIKNVSKMHPLLANCLRVTVS---TPEENAQFLEAFAASL 365 (367)
T ss_dssp -HHHHHHHHHTT----TEECEECGGGCGGGTTEEEEECC---CHHHHHHHHHHHHHHT
T ss_pred -HHHHHHHHHHC----CeEEEECCccCCCCCCEEEEecC---CHHHHHHHHHHHHHHh
Confidence 11223334322 355544332 2359999954 8999999999998754
No 98
>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis}
Probab=73.08 E-value=41 Score=31.16 Aligned_cols=98 Identities=11% Similarity=0.085 Sum_probs=57.7
Q ss_pred HHHHHHHHHHHHHHHHHHHhhCCCeEEeecCCCCCCcceeeeccccCcccccc-ccceeEEEEecCCCCCCCCCcchhhH
Q psy2480 189 IQDILTFNFSLVESIRQKLSEYPCLRILSHGPVSGLGLKEVTSQYLPVQTILE-SVQSCVVFQFVPKDAGWGPVPAYYDK 267 (337)
Q Consensus 189 i~~~I~~t~~La~~~~e~L~~~p~LeiL~~~~waglg~v~~~~~~~~~~~~~~-~~lsvVvFRy~P~~~~~e~~~~y~D~ 267 (337)
+.++.++..+.++.+.+.+++. ++++..+ +.+. . + ..-..+.+++. +.+ .++
T Consensus 333 ~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~--~~~~--~-------------~~~~~~~~~~~~~--~~~-------~~~ 385 (437)
T 3g0t_A 333 FRDSVIEYGRKARIMKKMFLDN-GFNIVYD--KDGN--E-------------PLADGFYFTVGYK--GMD-------SSK 385 (437)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTT-TEEESSC--EETT--E-------------ECCSSSEEEEEET--TCC-------HHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHc-CCEEecc--ccCC--C-------------CCceeEEEEEecC--CCC-------HHH
Confidence 5566777778888999999888 7877710 0000 0 1 22334555653 221 122
Q ss_pred HHHHHHHHHhhcCCCcceEEEEeeeCc----EEEEEecCCCCChhHHHHHHHHHHHHHh
Q psy2480 268 LNSWLGQILQRDVPSVSLNLTETAAFG----TVLRICPFECSSGGDYESFLVCLDAQVY 322 (337)
Q Consensus 268 LNswLgqiL~~~~~~~~~~v~et~~~G----~~LRfcplnp~T~edI~~~v~~L~~~~~ 322 (337)
+.+.|.+. ++.+......| .++|+|+-.. +.+||+++++.|++.+.
T Consensus 386 ----l~~~L~~~----gi~v~~~~~~~~~~~~~iRis~~~~-~~e~i~~~~~~l~~~~~ 435 (437)
T 3g0t_A 386 ----LIEKFVRY----GMCAITLKTTGSKRNEAMRICTSLL-PESQFPDLEKRLQMLNA 435 (437)
T ss_dssp ----HHHHHHHT----TEECEESTTTTCCCTTCEEEECSSS-CGGGHHHHHHHHHHHHH
T ss_pred ----HHHHHHHc----CeEEeeccccCCCCCCEEEEEEecC-CHHHHHHHHHHHHHHHh
Confidence 23344332 24455443211 5799998744 99999999999988654
No 99
>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3
Probab=72.06 E-value=31 Score=31.58 Aligned_cols=97 Identities=10% Similarity=0.064 Sum_probs=56.3
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhh-CCCeEEeecCCCCCCcceeeeccccCcccccccccee-EEEEecCCCCCCCCCcch
Q psy2480 187 TGIQDILTFNFSLVESIRQKLSE-YPCLRILSHGPVSGLGLKEVTSQYLPVQTILESVQSC-VVFQFVPKDAGWGPVPAY 264 (337)
Q Consensus 187 d~i~~~I~~t~~La~~~~e~L~~-~p~LeiL~~~~waglg~v~~~~~~~~~~~~~~~~lsv-VvFRy~P~~~~~e~~~~y 264 (337)
+.+.++.+..-+.++.+.+.+++ .|+++++. ..-+. +.+++...+.+
T Consensus 286 ~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~------------------------~~~~~~~~~~~~~~~~~------- 334 (390)
T 1d2f_A 286 PWLDALRIYLKDNLTYIADKMNAAFPELNWQI------------------------PQSTYLAWLDLRPLNID------- 334 (390)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCSSCCCCC------------------------CSBCSEEEEECGGGCCC-------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhCCCCEEec------------------------CCccEEEEEEccccCCC-------
Confidence 34445556666778888888888 78876654 11222 23455321111
Q ss_pred hhHHHHHHHHHHhhcCCCcceEEEEeee----CcEEEEEecCCCCChhHHHHHHHHHHHHHhh
Q psy2480 265 YDKLNSWLGQILQRDVPSVSLNLTETAA----FGTVLRICPFECSSGGDYESFLVCLDAQVYS 323 (337)
Q Consensus 265 ~D~LNswLgqiL~~~~~~~~~~v~et~~----~G~~LRfcplnp~T~edI~~~v~~L~~~~~i 323 (337)
...+.+.|.+.. ++.+..... ..-++|+|+-.+ .+++++.++.|++.+..
T Consensus 335 ----~~~l~~~l~~~~---gi~v~~g~~f~~~~~~~~Ris~~~~--~~~l~~~l~~l~~~l~~ 388 (390)
T 1d2f_A 335 ----DNALQKALIEQE---KVAIMPGYTYGEEGRGFVRLNAGCP--RSKLEKGVAGLINAIRA 388 (390)
T ss_dssp ----HHHHHHHHHHTT---CEECEEGGGGCGGGTTEEEEECCSC--HHHHHHHHHHHHHHHHH
T ss_pred ----HHHHHHHHHHHc---CEEeeCccccCCCCCCeEEEEecCC--HHHHHHHHHHHHHHHHh
Confidence 112334443222 244554432 235899999874 68899999998887654
No 100
>2c81_A Glutamine-2-deoxy-scyllo-inosose aminotransferase; SMAT, butirosin, aminoglycoside antibiotics; HET: PMP; 1.7A {Bacillus circulans} PDB: 2c7t_A*
Probab=71.94 E-value=32 Score=31.96 Aligned_cols=31 Identities=3% Similarity=-0.159 Sum_probs=26.9
Q ss_pred EEEEEecCCCC-ChhHHHHHHHHHHHHHhhhh
Q psy2480 295 TVLRICPFECS-SGGDYESFLVCLDAQVYSGS 325 (337)
Q Consensus 295 ~~LRfcplnp~-T~edI~~~v~~L~~~~~il~ 325 (337)
.+||+++-... |.+||+.+++.|++.++.+.
T Consensus 384 ~~lrl~~~~~~gt~edi~~~~~~l~~~~~~~~ 415 (418)
T 2c81_A 384 QSIVIHHAILLAEPSHLSLLVDAVAELARKFC 415 (418)
T ss_dssp HEEEEEGGGGGSCHHHHHHHHHHHHHHHHTTC
T ss_pred CEEEecCCccCCCHHHHHHHHHHHHHHHHhhc
Confidence 48999988788 99999999999999877653
No 101
>1sff_A 4-aminobutyrate aminotransferase; enzyme complexes; HET: IK2; 1.90A {Escherichia coli} SCOP: c.67.1.4 PDB: 1sf2_A* 1szk_A* 1szu_A* 1szs_A*
Probab=71.93 E-value=22 Score=32.88 Aligned_cols=40 Identities=18% Similarity=0.052 Sum_probs=30.0
Q ss_pred eEEEEeeeCcEEEEEecCCCCChhHHHHHHHHHHHHHhhh
Q psy2480 285 LNLTETAAFGTVLRICPFECSSGGDYESFLVCLDAQVYSG 324 (337)
Q Consensus 285 ~~v~et~~~G~~LRfcplnp~T~edI~~~v~~L~~~~~il 324 (337)
+.+......+-++|+|+--..+.++|+++++.|++.++.+
T Consensus 385 i~v~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~l~~~ 424 (426)
T 1sff_A 385 LILLSCGPYYNVLRILVPLTIEDAQIRQGLEIISQCFDEA 424 (426)
T ss_dssp EECEEESTTSCEEEECCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred cEEecCCCCCCEEEEECCccCCHHHHHHHHHHHHHHHHHH
Confidence 5555544345689999865568999999999999877654
No 102
>1yiz_A Kynurenine aminotransferase; glutamine transaminase; kynurenic acid, mosquito, PLP-enzyme, pyridoxal phosphate, PLP; HET: LLP; 1.55A {Aedes aegypti} SCOP: c.67.1.1 PDB: 1yiy_A* 2r5c_A* 2r5e_A*
Probab=70.00 E-value=18 Score=33.77 Aligned_cols=27 Identities=15% Similarity=0.160 Sum_probs=22.3
Q ss_pred cEEEEEecCCCCChhHHHHHHHHHHHHHh
Q psy2480 294 GTVLRICPFECSSGGDYESFLVCLDAQVY 322 (337)
Q Consensus 294 G~~LRfcplnp~T~edI~~~v~~L~~~~~ 322 (337)
+.++|+|+-+ +.++|+++++.|++.++
T Consensus 401 ~~~iRis~~~--~~e~i~~~l~~l~~~l~ 427 (429)
T 1yiz_A 401 EDFVRYCFFK--KDENLQKAAEILRKWKG 427 (429)
T ss_dssp TTEEEEECCS--CHHHHHHHHHHHHHHSC
T ss_pred CCeEEEEecC--CHHHHHHHHHHHHHhcc
Confidence 3589999974 79999999999987643
No 103
>3qgu_A LL-diaminopimelate aminotransferase; L-lysine, pyridoxal-5' phosphate, chamydomonas reinhardtii; HET: GOL; 1.55A {Chlamydomonas reinhardtii}
Probab=69.63 E-value=27 Score=32.77 Aligned_cols=98 Identities=7% Similarity=0.035 Sum_probs=55.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhCCCeEEeecCCCCCCcceeeeccccCccccccccceeEEEEecCCCCCCCCCcchhhH
Q psy2480 188 GIQDILTFNFSLVESIRQKLSEYPCLRILSHGPVSGLGLKEVTSQYLPVQTILESVQSCVVFQFVPKDAGWGPVPAYYDK 267 (337)
Q Consensus 188 ~i~~~I~~t~~La~~~~e~L~~~p~LeiL~~~~waglg~v~~~~~~~~~~~~~~~~lsvVvFRy~P~~~~~e~~~~y~D~ 267 (337)
.+.++.+.--+.++.+.+.|++. ++++.. +..-..+.+.+. +.+
T Consensus 342 ~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~-----------------------~~~~~~~~~~~~--~~~---------- 385 (449)
T 3qgu_A 342 EMNAMIKFYKENAQILKTTFTEM-GFSVYG-----------------------GDDAPYIWVGFP--GKP---------- 385 (449)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHT-TCCEEE-----------------------SSSSSEEEEECT--TSC----------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHC-CCeeeC-----------------------CCCeeEEEEECC--CCC----------
Confidence 34556666677888888888887 677665 112233444442 221
Q ss_pred HHHHHHHHHhhcCCCcceEEEEeee----CcEEEEEecCCCCChhHHHHHHHHHHHHHhhhhcc
Q psy2480 268 LNSWLGQILQRDVPSVSLNLTETAA----FGTVLRICPFECSSGGDYESFLVCLDAQVYSGSQG 327 (337)
Q Consensus 268 LNswLgqiL~~~~~~~~~~v~et~~----~G~~LRfcplnp~T~edI~~~v~~L~~~~~il~~t 327 (337)
...+.+.|.+.. ++.+..... +.-++|+|... +.++|+++++.|++.+..-+.-
T Consensus 386 -~~~~~~~l~~~~---gI~v~pg~~f~~~~~~~iRis~~~--~~e~i~~~l~~l~~~~~~~~~~ 443 (449)
T 3qgu_A 386 -SWDVFAEILERC---NIVTTPGSGYGPAGEGFVRASAFG--SRENILEAVRRFKEAYGKRNAS 443 (449)
T ss_dssp -HHHHHHHHHHHH---CEECEEGGGGCGGGTTEEEEECCS--CHHHHHHHHHHHHHHHC-----
T ss_pred -HHHHHHHHHHHC---CEEEecchHhCCCCCCeEEEEecC--CHHHHHHHHHHHHHHHHhcCcc
Confidence 112223333322 244444332 23599999533 8999999999999877655443
No 104
>3nx3_A Acoat, acetylornithine aminotransferase; csgid, structural genomics, center for structural genomics O infectious diseases; 1.80A {Campylobacter jejuni subsp}
Probab=69.57 E-value=24 Score=32.51 Aligned_cols=29 Identities=14% Similarity=0.017 Sum_probs=25.0
Q ss_pred cEEEEEecCCCCChhHHHHHHHHHHHHHh
Q psy2480 294 GTVLRICPFECSSGGDYESFLVCLDAQVY 322 (337)
Q Consensus 294 G~~LRfcplnp~T~edI~~~v~~L~~~~~ 322 (337)
+-++||+|--..|.+|++++++.|++.+.
T Consensus 365 ~~~iRi~~~~~~t~e~i~~~l~~l~~~l~ 393 (395)
T 3nx3_A 365 ENDLRFLPPLILQKEHIDEMSEKLRKALK 393 (395)
T ss_dssp TTEEEECCCTTCCHHHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCCCHHHHHHHHHHHHHHHH
Confidence 56999998777799999999999998764
No 105
>1mdo_A ARNB aminotransferase; type 1 aminotransferase fold; HET: MSE PMP; 1.70A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1mdx_A* 1mdz_A*
Probab=69.51 E-value=29 Score=31.66 Aligned_cols=31 Identities=16% Similarity=0.267 Sum_probs=23.6
Q ss_pred EEEEEecCCCCChhHHHHHHHHHHHHHhhhh
Q psy2480 295 TVLRICPFECSSGGDYESFLVCLDAQVYSGS 325 (337)
Q Consensus 295 ~~LRfcplnp~T~edI~~~v~~L~~~~~il~ 325 (337)
.+||+++-...|.+||+.+++.|++..+...
T Consensus 357 ~~lRi~~~~~~t~~~i~~~~~~l~~~~~~~~ 387 (393)
T 1mdo_A 357 RICSLPLFPDMTESDFDRVITALHQIAGQGS 387 (393)
T ss_dssp TEEEECCCTTCCHHHHHHHHHHHHHHHC---
T ss_pred CEEEecCCCCCCHHHHHHHHHHHHHHHhcCC
Confidence 4899986666699999999999998765544
No 106
>3hmu_A Aminotransferase, class III; structural genomics, pyridoxal phosphate, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi}
Probab=69.37 E-value=27 Score=33.91 Aligned_cols=31 Identities=10% Similarity=0.153 Sum_probs=26.1
Q ss_pred EEEEEecCCCCChhHHHHHHHHHHHHHhhhh
Q psy2480 295 TVLRICPFECSSGGDYESFLVCLDAQVYSGS 325 (337)
Q Consensus 295 ~~LRfcplnp~T~edI~~~v~~L~~~~~il~ 325 (337)
-+|||+|--..|.++|+++++.|++.+..+.
T Consensus 423 ~~iRi~p~~~~t~e~i~~~l~~l~~~l~~~~ 453 (472)
T 3hmu_A 423 DRMIISPPLVITPAEIDEMFVRIRKSLDEAQ 453 (472)
T ss_dssp TEEEECCCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 7899998766799999999999988776553
No 107
>2oga_A Transaminase; PLP-dependent enzyme, desosamine, deoxysugars, antibiotics, hydrolase; HET: PGU; 2.05A {Streptomyces venezuelae} PDB: 2oge_A*
Probab=69.37 E-value=9.6 Score=35.49 Aligned_cols=31 Identities=6% Similarity=-0.188 Sum_probs=25.6
Q ss_pred EEEEEecCCCCChhHHHHHHHHHHHHHhhhh
Q psy2480 295 TVLRICPFECSSGGDYESFLVCLDAQVYSGS 325 (337)
Q Consensus 295 ~~LRfcplnp~T~edI~~~v~~L~~~~~il~ 325 (337)
.+||+++-...|.+||+.+++.|++.+..+.
T Consensus 367 ~~lRi~~~~~~t~edi~~~~~~l~~~~~~l~ 397 (399)
T 2oga_A 367 QVLSLPIGPHLERPQALRVIDAVREWAERVD 397 (399)
T ss_dssp HEEEECCSTTCCHHHHHHHHHHHHHHHHSCC
T ss_pred CEEEccCCCCCCHHHHHHHHHHHHHHHHHhc
Confidence 5899986555599999999999999877654
No 108
>1u08_A Hypothetical aminotransferase YBDL; alpha beta protein; HET: PLP; 2.35A {Escherichia coli} SCOP: c.67.1.1
Probab=68.84 E-value=34 Score=31.24 Aligned_cols=92 Identities=12% Similarity=0.061 Sum_probs=52.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhCCCeEEeecCCCCCCcceeeeccccCccccccccceeEEEEecCCC-CCCCCCcchhh
Q psy2480 188 GIQDILTFNFSLVESIRQKLSEYPCLRILSHGPVSGLGLKEVTSQYLPVQTILESVQSCVVFQFVPKD-AGWGPVPAYYD 266 (337)
Q Consensus 188 ~i~~~I~~t~~La~~~~e~L~~~p~LeiL~~~~waglg~v~~~~~~~~~~~~~~~~lsvVvFRy~P~~-~~~e~~~~y~D 266 (337)
.+.++.++.-+.++.+.+.+++. ++++.. +..-..+.+++...+ .+ ..
T Consensus 287 ~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~-----------------------~~~g~~~~~~~~~~~~~~-------~~ 335 (386)
T 1u08_A 287 HYLALPDFYRQKRDILVNALNES-RLEILP-----------------------CEGTYFLLVDYSAVSTLD-------DV 335 (386)
T ss_dssp HHHTHHHHHHHHHHHHHHHTTSS-SCEECC-----------------------CCBSSEEEEECTTTCCSC-------HH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHC-CCeecC-----------------------CCceEEEEEecCCCCCCC-------HH
Confidence 34455666667888888888876 677653 111234556663211 11 11
Q ss_pred HHHHHHHHHHhhcCCCcceEEEEeee------CcEEEEEecCCCCChhHHHHHHHHHHH
Q psy2480 267 KLNSWLGQILQRDVPSVSLNLTETAA------FGTVLRICPFECSSGGDYESFLVCLDA 319 (337)
Q Consensus 267 ~LNswLgqiL~~~~~~~~~~v~et~~------~G~~LRfcplnp~T~edI~~~v~~L~~ 319 (337)
.+.+.|.+.. ++.+..... +..++|+|+-+ +.++|++.++.|++
T Consensus 336 ----~~~~~l~~~~---gi~v~~g~~f~~~~~~~~~iRis~~~--~~~~i~~~~~~l~~ 385 (386)
T 1u08_A 336 ----EFCQWLTQEH---GVAAIPLSVFCADPFPHKLIRLCFAK--KESTLLAAAERLRQ 385 (386)
T ss_dssp ----HHHHHHHHHS---CEECEEGGGGCSSCCCSCEEEEECCS--CHHHHHHHHHHHTT
T ss_pred ----HHHHHHHHhC---CEEEeCchHhCCCCCCCCEEEEEEcC--CHHHHHHHHHHHhh
Confidence 2333333222 244544321 23589999964 78999999998864
No 109
>3ecd_A Serine hydroxymethyltransferase 2; ssgcid, decode, bupsa00008A, one-carbon metabolism, pyridoxa phosphate, structural genomics; 1.60A {Burkholderia pseudomallei}
Probab=68.49 E-value=21 Score=32.82 Aligned_cols=102 Identities=7% Similarity=0.076 Sum_probs=59.9
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHHhhCCCeEEeecCCCCCCcceeeeccccCccccccccceeEEEEecCCCCCCCCCcch
Q psy2480 185 GQTGIQDILTFNFSLVESIRQKLSEYPCLRILSHGPVSGLGLKEVTSQYLPVQTILESVQSCVVFQFVPKDAGWGPVPAY 264 (337)
Q Consensus 185 G~d~i~~~I~~t~~La~~~~e~L~~~p~LeiL~~~~waglg~v~~~~~~~~~~~~~~~~lsvVvFRy~P~~~~~e~~~~y 264 (337)
..+.+.++.++..+.++.+.+.+.+ .+++++.. +.....+.+.+.+.+.+
T Consensus 284 ~~~~~~~~~~~~~~~~~~l~~~L~~-~g~~~~~~----------------------~~~~~~~~~~~~~~~~~------- 333 (425)
T 3ecd_A 284 LTDDFKTYIDRVLANAQALGDVLKA-GGVDLVTG----------------------GTDNHLLLVDLRPKGLK------- 333 (425)
T ss_dssp TSHHHHHHHHHHHHHHHHHHHHHHH-TTCEEGGG----------------------SCSSSEEEEECGGGTCC-------
T ss_pred HHHhHHHHHHHHHHHHHHHHHHHHh-CCCeeccC----------------------CCCceEEEEEeCCCCCC-------
Confidence 3456667888888899999999887 46776641 12234555566443322
Q ss_pred hhHHHHHHHHHHhhcCCCcceEEEEee--------eCcEEEEEecCCCC----ChhHHHHHHHHHHHHHhhh
Q psy2480 265 YDKLNSWLGQILQRDVPSVSLNLTETA--------AFGTVLRICPFECS----SGGDYESFLVCLDAQVYSG 324 (337)
Q Consensus 265 ~D~LNswLgqiL~~~~~~~~~~v~et~--------~~G~~LRfcplnp~----T~edI~~~v~~L~~~~~il 324 (337)
.+ .+.+.|.+. ++.+.... ....++|+++.... +.++|+++++.|++.+...
T Consensus 334 ~~----~~~~~l~~~----gi~v~~~~~p~~~~~~~~~~~iRi~~~~~~~~~~~~e~i~~~~~~l~~~l~~~ 397 (425)
T 3ecd_A 334 GA----QVEQALERA----GITCNKNGIPFDPEKPTITSGIRLGTPAGTTRGFGAAEFREVGRLILEVFEAL 397 (425)
T ss_dssp HH----HHHHHHHHT----TEECEECCCTTCSSCTTTCSEEEEESHHHHHTTCCHHHHHHHHHHHHHHHHHH
T ss_pred HH----HHHHHHHHc----CCEecccccCCCCCCCCCccceeccchhheeccCCHHHHHHHHHHHHHHHhcc
Confidence 01 222333321 23343211 11247999854332 5899999999998877654
No 110
>1gd9_A Aspartate aminotransferase; pyridoxal enzyme, temperature dependence O substrate recognition; HET: PLP; 1.80A {Pyrococcus horikoshii} SCOP: c.67.1.1 PDB: 1gde_A* 1dju_A*
Probab=68.44 E-value=18 Score=33.07 Aligned_cols=96 Identities=8% Similarity=0.072 Sum_probs=55.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhCCCeEEeecCCCCCCcceeeeccccCccccccccceeEEEEecCCCCCCCCCcchhhH
Q psy2480 188 GIQDILTFNFSLVESIRQKLSEYPCLRILSHGPVSGLGLKEVTSQYLPVQTILESVQSCVVFQFVPKDAGWGPVPAYYDK 267 (337)
Q Consensus 188 ~i~~~I~~t~~La~~~~e~L~~~p~LeiL~~~~waglg~v~~~~~~~~~~~~~~~~lsvVvFRy~P~~~~~e~~~~y~D~ 267 (337)
.+.++.+...+.++.+.+.+++. +++++. + ..-..+.+++.+.+.+
T Consensus 286 ~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~--~---------------------~~~~~~~~~~~~~~~~---------- 331 (389)
T 1gd9_A 286 AVEEMRKEYDRRRKLVWKRLNEM-GLPTVK--P---------------------KGAFYIFPRIRDTGLT---------- 331 (389)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHT-TCCCCC--C---------------------CBTTEECCBCGGGTCC----------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHc-CCeecC--C---------------------CeeeEEEEeccCCCCC----------
Confidence 34556666778888888888887 666553 1 0011222344211111
Q ss_pred HHHHHHHHHhhcCCCcceEEEEeee----CcEEEEEecCCCCChhHHHHHHHHHHHHHhh
Q psy2480 268 LNSWLGQILQRDVPSVSLNLTETAA----FGTVLRICPFECSSGGDYESFLVCLDAQVYS 323 (337)
Q Consensus 268 LNswLgqiL~~~~~~~~~~v~et~~----~G~~LRfcplnp~T~edI~~~v~~L~~~~~i 323 (337)
...+.+.|.+.. ++.+..... ++.++|+|+-. +.++|++.++.|++.++.
T Consensus 332 -~~~~~~~l~~~~---gi~v~~g~~~~~~~~~~iRi~~~~--~~~~i~~~l~~l~~~~~~ 385 (389)
T 1gd9_A 332 -SKKFSELMLKEA---RVAVVPGSAFGKAGEGYVRISYAT--AYEKLEEAMDRMERVLKE 385 (389)
T ss_dssp -HHHHHHHHHHHT---CEECEEGGGGCGGGTTBEEEECCS--CHHHHHHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHhC---CEEEeCchhhCCCCCCeEEEEecC--CHHHHHHHHHHHHHHHHh
Confidence 112334443222 244554432 23589999875 889999999999887654
No 111
>3get_A Histidinol-phosphate aminotransferase; NP_281508.1, structural genomics, joint center for structural genomics; HET: LLP MSE; 2.01A {Campylobacter jejuni subsp}
Probab=68.41 E-value=46 Score=29.96 Aligned_cols=90 Identities=18% Similarity=0.244 Sum_probs=55.9
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhCCCeEEeecCCCCCCcceeeeccccCccccccccceeEEEEecCCCCCCCCCcchhh
Q psy2480 187 TGIQDILTFNFSLVESIRQKLSEYPCLRILSHGPVSGLGLKEVTSQYLPVQTILESVQSCVVFQFVPKDAGWGPVPAYYD 266 (337)
Q Consensus 187 d~i~~~I~~t~~La~~~~e~L~~~p~LeiL~~~~waglg~v~~~~~~~~~~~~~~~~lsvVvFRy~P~~~~~e~~~~y~D 266 (337)
+.+.++.+..-+.++.+.+.+++. ++++.. ..-+.+.+++... + .+
T Consensus 274 ~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~------------------------~~~~~~~~~~~~~--~-------~~ 319 (365)
T 3get_A 274 EFTEKTLENNFSQMELYKEFAKKH-NIKIID------------------------SYTNFITYFFDEK--N-------ST 319 (365)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHT-TCEECC------------------------CSSSEEEEECSSS--C-------HH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhC-CCEECC------------------------CCCeEEEEECCCC--C-------HH
Confidence 345566677777888899999888 777653 2223355565321 1 12
Q ss_pred HHHHHHHHHHhhcCCCcceEEEEeeeC-cEEEEEecCCCCChhHHHHHHHHHHHHH
Q psy2480 267 KLNSWLGQILQRDVPSVSLNLTETAAF-GTVLRICPFECSSGGDYESFLVCLDAQV 321 (337)
Q Consensus 267 ~LNswLgqiL~~~~~~~~~~v~et~~~-G~~LRfcplnp~T~edI~~~v~~L~~~~ 321 (337)
+ +.+.|.+. ++.+...... ..++|+|+- +.+|++++++.|++.+
T Consensus 320 ~----~~~~l~~~----gi~v~~g~~~~~~~iRis~~---~~~~i~~l~~~l~~~l 364 (365)
T 3get_A 320 D----LSEKLLKK----GIIIRNLKSYGLNAIRITIG---TSYENEKFFTEFDKIL 364 (365)
T ss_dssp H----HHHHHHTT----TEECEECGGGTCSEEEEECC---CHHHHHHHHHHHHHHH
T ss_pred H----HHHHHHHC----CEEEEECccCCCCEEEEEcC---CHHHHHHHHHHHHHHh
Confidence 2 23344332 3555544432 369999965 8899999999998754
No 112
>3i4j_A Aminotransferase, class III; structural GENOMICS,NYSGXRC, target 11246C, deino radiodurans, pyridoxal phosphate, transfe PSI-2; 1.70A {Deinococcus radiodurans}
Probab=68.04 E-value=20 Score=33.50 Aligned_cols=32 Identities=16% Similarity=0.162 Sum_probs=25.7
Q ss_pred CcEEEEEecCCCCChhHHHHHHHHHHHHHhhh
Q psy2480 293 FGTVLRICPFECSSGGDYESFLVCLDAQVYSG 324 (337)
Q Consensus 293 ~G~~LRfcplnp~T~edI~~~v~~L~~~~~il 324 (337)
++.++|++|--..|.++++++++.|++.+..+
T Consensus 397 ~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~~ 428 (430)
T 3i4j_A 397 RGDHLLLGPPLSITAAEVDGLLALLAGALEDV 428 (430)
T ss_dssp --CEEEECCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHHHHHHHHh
Confidence 35689999876679999999999999887654
No 113
>3mad_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxal phosphate; HET: LLP; 2.00A {Symbiobacterium thermophilum} PDB: 3maf_A* 3mau_A* 3mbb_A*
Probab=67.94 E-value=4 Score=39.85 Aligned_cols=44 Identities=20% Similarity=0.478 Sum_probs=41.2
Q ss_pred hchhhHHHHHhcCchhHHHHHHHHHHHHHHHHHhhccCCceEEe
Q psy2480 35 IALPVWTTLKSMGQTGIQDILTFNFSLVESVRQKLSEYPCLRIL 78 (337)
Q Consensus 35 ~aLplW~alQ~Lg~~~I~~ri~~Af~ls~~l~~~L~~~~~I~il 78 (337)
..+..|.+++++|.+++.+++++.....+.+.+.|+++++++++
T Consensus 359 ~~~a~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~ 402 (514)
T 3mad_A 359 LSATAWAAMLSLGEEGYLDATRRILQAADRLKAGVRAIPSLKIL 402 (514)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTCEES
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEe
Confidence 46789999999999999999999999999999999999999987
No 114
>3uwc_A Nucleotide-sugar aminotransferase; lipopolysaccharide biosynthesis; HET: MSE PMP; 1.80A {Coxiella burnetii}
Probab=67.22 E-value=10 Score=34.52 Aligned_cols=43 Identities=5% Similarity=0.006 Sum_probs=31.7
Q ss_pred chhhHHHHhhChhhHHHHHHHHHHHHHHHHHHHhhCCC-eEEee
Q psy2480 175 LPVWTTLKSMGQTGIQDILTFNFSLVESIRQKLSEYPC-LRILS 217 (337)
Q Consensus 175 L~lW~~Lq~LG~d~i~~~I~~t~~La~~~~e~L~~~p~-LeiL~ 217 (337)
.++..++.....+.+.+++++.-++++.+.+.+++.++ +++..
T Consensus 233 ~~~~aa~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~ 276 (374)
T 3uwc_A 233 DTIQAVIANRLMNQLETITEKRRGIAHLYDQSFVDLSEFIDVPV 276 (374)
T ss_dssp CHHHHHHHHHHGGGHHHHHHHHHHHHHHHHHHTGGGTTTEECCC
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeEEecc
Confidence 44444554444566777888888999999999999988 87753
No 115
>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89} PDB: 3p6k_A*
Probab=67.18 E-value=37 Score=30.72 Aligned_cols=39 Identities=13% Similarity=-0.109 Sum_probs=27.1
Q ss_pred eEEEEeeeC--cEEEEEecCCCCChhHHHHHHHHHHHHHhhhh
Q psy2480 285 LNLTETAAF--GTVLRICPFECSSGGDYESFLVCLDAQVYSGS 325 (337)
Q Consensus 285 ~~v~et~~~--G~~LRfcplnp~T~edI~~~v~~L~~~~~il~ 325 (337)
+.+...... ..++|+|+-.+ .++|++.++.|++.+..+.
T Consensus 332 i~v~~g~~~~~~~~iRi~~~~~--~~~i~~~l~~l~~~l~~~~ 372 (375)
T 3op7_A 332 VLLVPGNRFERDGYVRLGFACE--QETLIKGLEKLSQFLRRFD 372 (375)
T ss_dssp EECEEGGGGTCTTEEEECCCSC--HHHHHHHHHHHHHHHGGGC
T ss_pred EEEeChhhhCCCCeEEEEecCC--HHHHHHHHHHHHHHHHHHh
Confidence 445544432 35999996543 4899999999998877653
No 116
>3n5m_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, csgid; 2.05A {Bacillus anthracis}
Probab=66.99 E-value=21 Score=33.85 Aligned_cols=29 Identities=14% Similarity=0.165 Sum_probs=25.0
Q ss_pred cEEEEEecCCCCChhHHHHHHHHHHHHHh
Q psy2480 294 GTVLRICPFECSSGGDYESFLVCLDAQVY 322 (337)
Q Consensus 294 G~~LRfcplnp~T~edI~~~v~~L~~~~~ 322 (337)
+-++||+|--..|.++|+++++.|++.+.
T Consensus 422 ~~~iRi~~~~~~t~e~i~~~l~~l~~~l~ 450 (452)
T 3n5m_A 422 NNILTLAPPLVISSEEIAFVIGTLKTAME 450 (452)
T ss_dssp CCEEEECCCTTCCHHHHHHHHHHHHHHHT
T ss_pred CCEEEEECCCCCCHHHHHHHHHHHHHHHH
Confidence 46899998777799999999999998765
No 117
>3dod_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, biotin biosynthesis, pyridoxal phosphate, adenosyl-L-methionine; HET: PLP; 1.90A {Bacillus subtilis} SCOP: c.67.1.0 PDB: 3drd_A 3du4_A*
Probab=66.91 E-value=64 Score=30.46 Aligned_cols=31 Identities=13% Similarity=0.247 Sum_probs=26.4
Q ss_pred cEEEEEecCCCCChhHHHHHHHHHHHHHhhh
Q psy2480 294 GTVLRICPFECSSGGDYESFLVCLDAQVYSG 324 (337)
Q Consensus 294 G~~LRfcplnp~T~edI~~~v~~L~~~~~il 324 (337)
|-++|++|--..|.+||+++++.|++.+..+
T Consensus 413 ~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~~ 443 (448)
T 3dod_A 413 GDVIAFLPPLASTAEELSEMVAIMKQAIHEV 443 (448)
T ss_dssp TTEEEECCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence 4789999866669999999999999887755
No 118
>1gc0_A Methionine gamma-lyase; pyridoxal-5'-phosphate; HET: LLP; 1.70A {Pseudomonas putida} SCOP: c.67.1.3 PDB: 1gc2_A* 1pg8_A* 1ukj_A* 2o7c_A*
Probab=65.32 E-value=19 Score=33.65 Aligned_cols=118 Identities=9% Similarity=0.098 Sum_probs=58.0
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhCCCeEEeecCCCCCCcceeeeccccCccccccccceeEEEEecCCCCCCCCCcchhh
Q psy2480 187 TGIQDILTFNFSLVESIRQKLSEYPCLRILSHGPVSGLGLKEVTSQYLPVQTILESVQSCVVFQFVPKDAGWGPVPAYYD 266 (337)
Q Consensus 187 d~i~~~I~~t~~La~~~~e~L~~~p~LeiL~~~~waglg~v~~~~~~~~~~~~~~~~lsvVvFRy~P~~~~~e~~~~y~D 266 (337)
+.+..+++...+.++.+.+.+++.|.++-+-.........++++... +....+++.|++... . +
T Consensus 260 ~~~~~~~~~~~~~~~~l~~~L~~~~~v~~v~~~~l~~~~~~~~~~~~------~~~~~~~~~~~l~~~--~--------~ 323 (398)
T 1gc0_A 260 KTLNLRMDRHCANAQVLAEFLARQPQVELIHYPGLASFPQYTLARQQ------MSQPGGMIAFELKGG--I--------G 323 (398)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHTCTTEEEEEEC----------------------CCTTEEEEEETTH--H--------H
T ss_pred chHHHHHHHHHHHHHHHHHHHhcCCCeeEEECCCCCCCcCHHHHHhh------CCCCceEEEEEECCC--H--------H
Confidence 34556777888888999999999888765432111111122333221 123577888887421 0 1
Q ss_pred HHHHHHHH--HHhhcCCCcce-EEEEe--------------eeC---cEEEEEecCCCCChhHHHHHHHHHHHH
Q psy2480 267 KLNSWLGQ--ILQRDVPSVSL-NLTET--------------AAF---GTVLRICPFECSSGGDYESFLVCLDAQ 320 (337)
Q Consensus 267 ~LNswLgq--iL~~~~~~~~~-~v~et--------------~~~---G~~LRfcplnp~T~edI~~~v~~L~~~ 320 (337)
.....+.+ +..+....+++ .++.. ... ..+||+|+-...+.++|+.+.+.|++.
T Consensus 324 ~~~~~l~~~~i~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRis~g~~~~~~~i~~l~~al~~~ 397 (398)
T 1gc0_A 324 AGRRFMNALQLFSRAVSLGDAESLAQHPASMTHSSYTPEERAHYGISEGLVRLSVGLEDIDDLLADVQQALKAS 397 (398)
T ss_dssp HHHHHHHHCSSSEECSCCSCSSCEEECGGGTTTSSSCHHHHHHTTCCTTEEEEECCSSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCceeccCCCCcceeeecccccccccCCHHHHHhcCCCCCeEEEEeCcCCHHHHHHHHHHHHHhc
Confidence 11111111 11111100111 00000 011 359999998766899999999988763
No 119
>1vp4_A Aminotransferase, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE PLP; 1.82A {Thermotoga maritima} SCOP: c.67.1.1
Probab=65.26 E-value=67 Score=29.91 Aligned_cols=30 Identities=10% Similarity=-0.078 Sum_probs=25.1
Q ss_pred EEEEEecCCCCChhHHHHHHHHHHHHHhhhh
Q psy2480 295 TVLRICPFECSSGGDYESFLVCLDAQVYSGS 325 (337)
Q Consensus 295 ~~LRfcplnp~T~edI~~~v~~L~~~~~il~ 325 (337)
-++|+|+-.. +.++|+++++.|++.+..+.
T Consensus 390 ~~iRis~~~~-~~e~i~~~l~~l~~~l~~~~ 419 (425)
T 1vp4_A 390 PSMRLSFCLP-PDEKIVEGIKRLREVVLEYG 419 (425)
T ss_dssp SEEEEECSSS-CHHHHHHHHHHHHHHHHHHH
T ss_pred CeEEEEeCCC-CHHHHHHHHHHHHHHHHHHH
Confidence 5899998764 89999999999998876554
No 120
>1bs0_A Protein (8-amino-7-oxonanoate synthase); PLP-dependent acyl-COA synthase, biotin biosynthesis, 8-AMIN oxonanoate synthase; 1.65A {Escherichia coli} SCOP: c.67.1.4 PDB: 2g6w_A* 1dje_A* 1dj9_A*
Probab=64.65 E-value=19 Score=32.85 Aligned_cols=26 Identities=19% Similarity=0.224 Sum_probs=22.4
Q ss_pred EEEEEecCCCCChhHHHHHHHHHHHH
Q psy2480 295 TVLRICPFECSSGGDYESFLVCLDAQ 320 (337)
Q Consensus 295 ~~LRfcplnp~T~edI~~~v~~L~~~ 320 (337)
.++|+++-...|.+||+++++.|++.
T Consensus 358 ~~~Ri~~~~~~~~~~i~~~~~~l~~~ 383 (384)
T 1bs0_A 358 ARLRLTLTAAHEMQDIDRLLEVLHGN 383 (384)
T ss_dssp EEECCBCCTTCCHHHHHHHHHHHHHH
T ss_pred ceEEEEEcCCCCHHHHHHHHHHHHhh
Confidence 69999987666899999999999864
No 121
>1rv3_A Serine hydroxymethyltransferase, cytosolic; one-carbon metabolism; HET: GLY PLP; 2.40A {Oryctolagus cuniculus} SCOP: c.67.1.4 PDB: 1rv4_A* 1rvu_A* 1rvy_A* 1ls3_A* 1cj0_A* 1bj4_A* 1eji_A*
Probab=64.52 E-value=37 Score=32.98 Aligned_cols=102 Identities=11% Similarity=0.110 Sum_probs=59.8
Q ss_pred hChhhHHHHHHHHHHHHHHHHHHHhhCCCeEEeecCCCCCCcceeeeccccCccccccccceeEEEEecCCCCCCCCCcc
Q psy2480 184 MGQTGIQDILTFNFSLVESIRQKLSEYPCLRILSHGPVSGLGLKEVTSQYLPVQTILESVQSCVVFQFVPKDAGWGPVPA 263 (337)
Q Consensus 184 LG~d~i~~~I~~t~~La~~~~e~L~~~p~LeiL~~~~waglg~v~~~~~~~~~~~~~~~~lsvVvFRy~P~~~~~e~~~~ 263 (337)
+..+++.++.++..+.++.+.+.|.+. +++++.. | .....+.+.+.+.+.+
T Consensus 318 ~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~----~------------------~~~~~~~v~~~~~g~~------ 368 (483)
T 1rv3_A 318 AMTPEFKEYQRQVVANCRALSAALVEL-GYKIVTG----G------------------SDNHLILVDLRSKGTD------ 368 (483)
T ss_dssp HTSHHHHHHHHHHHHHHHHHHHHHHHT-TCEEGGG----S------------------CSSSEEEEEGGGGTCC------
T ss_pred HhChhHHHHHHHHHHHHHHHHHHHHhc-CCEeccC----C------------------CCCceEEEeccCCCCC------
Confidence 334567788888889999999999987 8888751 0 0011223344333322
Q ss_pred hhhHHHHHHHHHHhhcCCCcceEEE----Eee---eCcEEEEEecCCCC----ChhHHHHHHHHHHHHHhh
Q psy2480 264 YYDKLNSWLGQILQRDVPSVSLNLT----ETA---AFGTVLRICPFECS----SGGDYESFLVCLDAQVYS 323 (337)
Q Consensus 264 y~D~LNswLgqiL~~~~~~~~~~v~----et~---~~G~~LRfcplnp~----T~edI~~~v~~L~~~~~i 323 (337)
.+. +.+.|.+ . ++.+. ... .+..++|+++-... +++|++++++.|++.+..
T Consensus 369 -~~~----~~~~L~~-~---gI~v~~~~~pg~~~~~~~~~iRis~~~~~t~g~~~edi~~~~~~l~~~l~~ 430 (483)
T 1rv3_A 369 -GGR----AEKVLEA-C---SIACNKNTCPGDKSALRPSGLRLGTPALTSRGLLEKDFQKVAHFIHRGIEL 430 (483)
T ss_dssp -HHH----HHHHHHH-T---TEECEEECCSSCSCTTSCCEEEEECHHHHHTTCCHHHHHHHHHHHHHHHHH
T ss_pred -HHH----HHHHHHh-C---CcEEecCCCCCCCcCCCCceEEeecCCcccCCCCHHHHHHHHHHHHHHHHh
Confidence 012 2233332 1 23333 111 12248999976432 499999999999887654
No 122
>3aow_A Putative uncharacterized protein PH0207; protein-PLP-AKG triple complex, schiff-base linkage, kynuren aminotransferase; HET: PLP AKG; 1.56A {Pyrococcus horikoshii} PDB: 3aov_A* 3ath_A* 3av7_A* 1x0m_A 1wst_A*
Probab=64.43 E-value=76 Score=30.18 Aligned_cols=29 Identities=7% Similarity=-0.044 Sum_probs=23.9
Q ss_pred EEEEEecCCCCChhHHHHHHHHHHHHHhhh
Q psy2480 295 TVLRICPFECSSGGDYESFLVCLDAQVYSG 324 (337)
Q Consensus 295 ~~LRfcplnp~T~edI~~~v~~L~~~~~il 324 (337)
-++|+|+-.. +.++|++.++.|.+.+...
T Consensus 417 ~~iRls~~~~-~~e~i~~~~~~L~~~l~~~ 445 (448)
T 3aow_A 417 NTMRLNFTYV-DEDKIMEGIKRLAETIKEE 445 (448)
T ss_dssp SEEEEECSSS-CTHHHHHHHHHHHHHHHHH
T ss_pred CEEEEEeCCC-CHHHHHHHHHHHHHHHHHH
Confidence 5899997653 8999999999998877544
No 123
>2o0r_A RV0858C (N-succinyldiaminopimelate aminotransfera; PLP-binding enzyme, lysine biosynthesis, aminotransferase, S genomics; HET: LLP; 2.00A {Mycobacterium tuberculosis}
Probab=64.17 E-value=22 Score=33.04 Aligned_cols=27 Identities=7% Similarity=0.058 Sum_probs=21.1
Q ss_pred EEEEEecCCCCChhHHHHHHHHHHHHHhh
Q psy2480 295 TVLRICPFECSSGGDYESFLVCLDAQVYS 323 (337)
Q Consensus 295 ~~LRfcplnp~T~edI~~~v~~L~~~~~i 323 (337)
.++|+|+-+ +.+||+++++.|++.++.
T Consensus 369 ~~iRis~~~--~~e~i~~~~~~l~~~~~~ 395 (411)
T 2o0r_A 369 HLVRFTFCK--RDDTLDEAIRRLSVLAER 395 (411)
T ss_dssp GCEEEECCS--CHHHHHHHHHHHGGGGC-
T ss_pred CeEEEEecC--CHHHHHHHHHHHHHHHhc
Confidence 589999864 788999999998775443
No 124
>1lc5_A COBD, L-threonine-O-3-phosphate decarboxylase; PLP-dependent decarboxylase cobalamin, lyase; 1.46A {Salmonella enterica} SCOP: c.67.1.1 PDB: 1lc7_A* 1lc8_A* 1lkc_A*
Probab=63.78 E-value=61 Score=29.28 Aligned_cols=92 Identities=14% Similarity=0.125 Sum_probs=52.8
Q ss_pred HHHHHHHHHHHHHHHHHHHhhCCCeEEeecCCCCCCcceeeeccccCccccccccceeEEEEecCCCCCCCCCcchhhHH
Q psy2480 189 IQDILTFNFSLVESIRQKLSEYPCLRILSHGPVSGLGLKEVTSQYLPVQTILESVQSCVVFQFVPKDAGWGPVPAYYDKL 268 (337)
Q Consensus 189 i~~~I~~t~~La~~~~e~L~~~p~LeiL~~~~waglg~v~~~~~~~~~~~~~~~~lsvVvFRy~P~~~~~e~~~~y~D~L 268 (337)
+.++.+..-+.++.+.+.+++.|++++.. ..-+.+.|++. .+ . ++
T Consensus 266 ~~~~~~~~~~~~~~l~~~L~~~~~~~~~~------------------------~~g~~~~~~~~-~~-~--------~~- 310 (364)
T 1lc5_A 266 QQATWHWLREEGARFYQALCQLPLLTVYP------------------------GRANYLLLRCE-RE-D--------ID- 310 (364)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTSTTEEECC------------------------CSSSEEEEEES-CT-T--------CC-
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCEECC------------------------CCCeEEEEECC-Cc-H--------HH-
Confidence 44455555677888999999888888753 11233445552 21 1 11
Q ss_pred HHHHHHHHhhcCCCcceEEEEeee----CcEEEEEecCCCCChhHHHHHHHHHHHHHhhhh
Q psy2480 269 NSWLGQILQRDVPSVSLNLTETAA----FGTVLRICPFECSSGGDYESFLVCLDAQVYSGS 325 (337)
Q Consensus 269 NswLgqiL~~~~~~~~~~v~et~~----~G~~LRfcplnp~T~edI~~~v~~L~~~~~il~ 325 (337)
+.+.|.+. ++.+..... ++-++|+|+. +.+|++++++.|++.++.+.
T Consensus 311 ---l~~~l~~~----gi~v~~g~~~~~~~~~~iRis~~---~~~~~~~l~~~l~~~~~~~~ 361 (364)
T 1lc5_A 311 ---LQRRLLTQ----RILIRSCANYPGLDSRYYRVAIR---SAAQNERLLAALRNVLTGIA 361 (364)
T ss_dssp ---HHHHHHTT----TEECEECTTSTTCCTTEEEEECC---CHHHHHHHHHHHHHHC----
T ss_pred ---HHHHHHHC----CcEEeeCcccCCCCCCEEEEEeC---CHHHHHHHHHHHHHHhhccc
Confidence 22333321 355554432 2358999953 68889999999988766553
No 125
>2cb1_A O-acetyl homoserine sulfhydrylase; PLP enzyme, lyase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: LLP; 2.0A {Thermus thermophilus}
Probab=63.35 E-value=65 Score=30.12 Aligned_cols=32 Identities=9% Similarity=0.050 Sum_probs=26.5
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhhCCCeEEee
Q psy2480 186 QTGIQDILTFNFSLVESIRQKLSEYPCLRILS 217 (337)
Q Consensus 186 ~d~i~~~I~~t~~La~~~~e~L~~~p~LeiL~ 217 (337)
-+.+.+++++..++++++.+.|.+.|+++.+.
T Consensus 276 l~~l~~~~~~~~~~~~~l~~~L~~~~~v~~v~ 307 (412)
T 2cb1_A 276 LETVALRVARMSETARFLAERLQGHPKVKALR 307 (412)
T ss_dssp GGGHHHHHHHHHHHHHHHHHHHHTCTTCSEEE
T ss_pred CchHHHHHHHHHHHHHHHHHHHHcCCCeeEEE
Confidence 35566778888899999999999999998774
No 126
>1jg8_A L-ALLO-threonine aldolase; glycine biosynthesis, pyridoxal-5'- phosphate, calcium binding site, structural genomics, PSI; HET: LLP; 1.80A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1lw4_A* 1lw5_A* 1m6s_A* 2fm1_A*
Probab=63.10 E-value=34 Score=30.53 Aligned_cols=29 Identities=21% Similarity=0.195 Sum_probs=23.2
Q ss_pred EEEEEecCCCCChhHHHHHHHHHHHHHhh
Q psy2480 295 TVLRICPFECSSGGDYESFLVCLDAQVYS 323 (337)
Q Consensus 295 ~~LRfcplnp~T~edI~~~v~~L~~~~~i 323 (337)
.++|+++--..+.+|++++++.|++.+..
T Consensus 317 ~~iRl~~~~~~~~e~i~~~~~~l~~~l~~ 345 (347)
T 1jg8_A 317 TEIRLVTHKDVSRNDIEEALNIFEKLFRK 345 (347)
T ss_dssp TEEEEECCTTSCHHHHHHHHHHHHHHHHH
T ss_pred CeEEEEeCCCCCHHHHHHHHHHHHHHHHh
Confidence 47999875445899999999999887653
No 127
>1z7d_A Ornithine aminotransferase; structural genomics consortium, SGC, malaria; 2.10A {Plasmodium yoelii yoelii} SCOP: c.67.1.4 PDB: 3lg0_A 3ntj_A
Probab=61.97 E-value=55 Score=30.98 Aligned_cols=32 Identities=13% Similarity=0.124 Sum_probs=26.0
Q ss_pred CcEEEEEecCCCCChhHHHHHHHHHHHHHhhh
Q psy2480 293 FGTVLRICPFECSSGGDYESFLVCLDAQVYSG 324 (337)
Q Consensus 293 ~G~~LRfcplnp~T~edI~~~v~~L~~~~~il 324 (337)
++-++|++|--..|.+||+++++.|++.+..+
T Consensus 398 ~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~~ 429 (433)
T 1z7d_A 398 HDKTIRLTPPLCITKEQLDECTEIIVKTVKFF 429 (433)
T ss_dssp TTTEEEECCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCcCCCHHHHHHHHHHHHHHHHHH
Confidence 35689999855559999999999999877654
No 128
>1s0a_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; fold type I, subclass II, homodimer; HET: LLP; 1.71A {Escherichia coli} SCOP: c.67.1.4 PDB: 1qj5_A* 1mlz_A* 1qj3_A* 1mly_A* 1s06_A* 1s08_A* 1s09_A* 1s07_A* 1mgv_A* 1dty_A*
Probab=61.64 E-value=20 Score=33.52 Aligned_cols=33 Identities=9% Similarity=0.124 Sum_probs=26.5
Q ss_pred cEEEEEecCCCCChhHHHHHHHHHHHHHhhhhc
Q psy2480 294 GTVLRICPFECSSGGDYESFLVCLDAQVYSGSQ 326 (337)
Q Consensus 294 G~~LRfcplnp~T~edI~~~v~~L~~~~~il~~ 326 (337)
+.++|++|--..|.+||+++++.|++.++.+..
T Consensus 394 ~~~iRis~~~~~t~e~i~~~~~~l~~~~~~~~~ 426 (429)
T 1s0a_A 394 GKLIYLMPPYIILPQQLQRLTAAVNRAVQDETF 426 (429)
T ss_dssp TTEEEECCCTTCCHHHHHHHHHHHHHHTSSGGG
T ss_pred CCEEEEECCCCCCHHHHHHHHHHHHHHHHhhhc
Confidence 458999976566899999999999987765543
No 129
>3dr4_A Putative perosamine synthetase; deoxysugar, pyridoxal phosphate, aspartate aminotransferase, O-antigen; HET: G4M; 1.60A {Caulobacter crescentus} PDB: 3dr7_A* 3bn1_A*
Probab=61.60 E-value=38 Score=31.02 Aligned_cols=45 Identities=13% Similarity=0.048 Sum_probs=31.8
Q ss_pred cCcchhhHHHHhhChhhHHHHHHHHHHHHHHHHHHHhhCCCeEEee
Q psy2480 172 AIALPVWTTLKSMGQTGIQDILTFNFSLVESIRQKLSEYPCLRILS 217 (337)
Q Consensus 172 ~~AL~lW~~Lq~LG~d~i~~~I~~t~~La~~~~e~L~~~p~LeiL~ 217 (337)
.+...+..++.....+.+-+++++.-++++.+.+.+++. ++++..
T Consensus 250 ~~~~~l~aa~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~ 294 (391)
T 3dr4_A 250 YRMTNIQAAIGLAQLERVDEHLAARERVVGWYEQKLARL-GNRVTK 294 (391)
T ss_dssp CBCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHGGG-TTSEEC
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC-CccccC
Confidence 344444444444444566778888888999999999988 887765
No 130
>3n0l_A Serine hydroxymethyltransferase; alpha beta class, 3-layer(ABA) sandwich, CSGI transferase, structural genomics; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=60.65 E-value=50 Score=30.23 Aligned_cols=100 Identities=8% Similarity=0.038 Sum_probs=58.7
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhhCCCeEEeecCCCCCCcceeeeccccCccccccccceeEEEEecCCCCCCCCCcchh
Q psy2480 186 QTGIQDILTFNFSLVESIRQKLSEYPCLRILSHGPVSGLGLKEVTSQYLPVQTILESVQSCVVFQFVPKDAGWGPVPAYY 265 (337)
Q Consensus 186 ~d~i~~~I~~t~~La~~~~e~L~~~p~LeiL~~~~waglg~v~~~~~~~~~~~~~~~~lsvVvFRy~P~~~~~e~~~~y~ 265 (337)
.+.+.++.++..+.++.+.+.+++ .+++++.. ......+.+.+.+.+.+
T Consensus 277 ~~~~~~~~~~~~~~~~~l~~~L~~-~g~~~~~~----------------------~~~~~~~~~~~~~~~~~-------- 325 (417)
T 3n0l_A 277 SDEWKVYAKQVRTNAQVLANVLMD-RKFKLVSD----------------------GTDNHLVLMSFLDREFS-------- 325 (417)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHH-TTCEEGGG----------------------SCSSSEEEEECTTSSSC--------
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHh-CCceeccC----------------------CCCceEEEEEcccCCCC--------
Confidence 355667777888888999999988 67777641 12233455555544432
Q ss_pred hHHHHHHHHHHhhcCCCcceEEEEee--------eCcEEEEEecCCC----CChhHHHHHHHHHHHHHhh
Q psy2480 266 DKLNSWLGQILQRDVPSVSLNLTETA--------AFGTVLRICPFEC----SSGGDYESFLVCLDAQVYS 323 (337)
Q Consensus 266 D~LNswLgqiL~~~~~~~~~~v~et~--------~~G~~LRfcplnp----~T~edI~~~v~~L~~~~~i 323 (337)
...+.+.|.+. ++.+.... .....+|+++... .+++||+++++.|++.+..
T Consensus 326 ---~~~~~~~l~~~----gi~v~~~~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~~i~~~~~~l~~~l~~ 388 (417)
T 3n0l_A 326 ---GKDADLALGNA----GITANKNTVPGEIRSPFITSGLRLGTPALTARGFKEKEMEIVSNYIADILDD 388 (417)
T ss_dssp ---HHHHHHHHHHT----TEECEECCCTTCCSCTTTCSEEEEECHHHHHTTCCHHHHHHHHHHHHHHHHT
T ss_pred ---HHHHHHHHHHc----CeEEeccccCCCCcccCCCCeeEecCHHHhhCCCCHHHHHHHHHHHHHHHhc
Confidence 11222333321 23333221 1224689886432 2689999999999987654
No 131
>2dou_A Probable N-succinyldiaminopimelate aminotransfera; PLP-dependent enzyme, structural genomics, NPPSFA; HET: EPE; 2.30A {Thermus thermophilus}
Probab=60.16 E-value=74 Score=28.78 Aligned_cols=90 Identities=10% Similarity=0.043 Sum_probs=51.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhCCCeEEeecCCCCCCcceeeeccccCccccccccceeEEEEecCCCCCCCCCcchhhH
Q psy2480 188 GIQDILTFNFSLVESIRQKLSEYPCLRILSHGPVSGLGLKEVTSQYLPVQTILESVQSCVVFQFVPKDAGWGPVPAYYDK 267 (337)
Q Consensus 188 ~i~~~I~~t~~La~~~~e~L~~~p~LeiL~~~~waglg~v~~~~~~~~~~~~~~~~lsvVvFRy~P~~~~~e~~~~y~D~ 267 (337)
.+.++.+..-+.++.+.+.|++. +++.. +..-..+.+++ |.+.+
T Consensus 281 ~~~~~~~~~~~~~~~l~~~L~~~--~~~~~-----------------------~~~~~~~~~~~-~~~~~---------- 324 (376)
T 2dou_A 281 VVRGYARVYRERALGMAEALKGV--LSLLP-----------------------PRATMYLWGRL-PEGVD---------- 324 (376)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTT--SEECC-----------------------CCBSSEEEEEC-CTTCC----------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHh--cCccC-----------------------CCeeEEEEEEC-CCCCC----------
Confidence 34455556667788888888876 55543 11111244555 22211
Q ss_pred HHHHHHHHHhhcCCCcceEEEEeee----CcEEEEEecCCCCChhHHHHHHHHHHHH
Q psy2480 268 LNSWLGQILQRDVPSVSLNLTETAA----FGTVLRICPFECSSGGDYESFLVCLDAQ 320 (337)
Q Consensus 268 LNswLgqiL~~~~~~~~~~v~et~~----~G~~LRfcplnp~T~edI~~~v~~L~~~ 320 (337)
...+.+.|.+. ++.+..... ++.++|+|+-. +.++|+++++.|++.
T Consensus 325 -~~~~~~~l~~~----gi~v~~g~~f~~~~~~~~Ris~~~--~~~~i~~~l~~l~~~ 374 (376)
T 2dou_A 325 -DLEFGLRLVER----GVALAPGRGFGPGGKGFVRIALVR--PLEELLEAAKRIREA 374 (376)
T ss_dssp -HHHHHHHHHHT----TEECEEGGGGCGGGTTEEEEECCS--CHHHHHHHHHHHHHT
T ss_pred -HHHHHHHHHHC----CEEEcCchhhCCCCCCeEEEEecC--CHHHHHHHHHHHHHH
Confidence 11233444433 255554332 23589999864 789999999988764
No 132
>3vax_A Putative uncharacterized protein DNDA; desulfurase, transferase; HET: PLP; 2.40A {Streptomyces lividans}
Probab=59.91 E-value=37 Score=30.94 Aligned_cols=104 Identities=12% Similarity=0.038 Sum_probs=46.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhCCCeEEeecCCCCCCcceeeeccccCccccccccceeEEEEecCCCCCCCCCcchhh
Q psy2480 187 TGIQDILTFNFSLVESIRQKLSEYPCLRILSHGPVSGLGLKEVTSQYLPVQTILESVQSCVVFQFVPKDAGWGPVPAYYD 266 (337)
Q Consensus 187 d~i~~~I~~t~~La~~~~e~L~~~p~LeiL~~~~waglg~v~~~~~~~~~~~~~~~~lsvVvFRy~P~~~~~e~~~~y~D 266 (337)
+.+.++.++..+.++.+.+.++ .+++++..... ......+.|++. +.+ ..+..+
T Consensus 280 ~~~~~~~~~~~~~~~~l~~~L~-~~~~~~~~~~~--------------------~~~~~~~~~~~~--~~~---~~~l~~ 333 (400)
T 3vax_A 280 AEHAQWQVAAQDLRSRLLAGLA-STSFQVNGDQD--------------------HVVPHILNLSFE--DVD---AEAFLV 333 (400)
T ss_dssp HSHHHHHHHHHHHHHHHHHHHT-TTTCEECSCTT--------------------SBCTTEEEEECT--TCC---HHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHhhC-CCCEEEeCCcc--------------------cCCCCEEEEEeC--CCC---HHHHHH
Confidence 4566788888889999999999 89998876211 111346677653 221 012233
Q ss_pred HHHHHHHHHHhhcCCCcceEEEEe-------------e-eCcEEEEEec-CCCCChhHHHHHHHHHHHHHh
Q psy2480 267 KLNSWLGQILQRDVPSVSLNLTET-------------A-AFGTVLRICP-FECSSGGDYESFLVCLDAQVY 322 (337)
Q Consensus 267 ~LNswLgqiL~~~~~~~~~~v~et-------------~-~~G~~LRfcp-lnp~T~edI~~~v~~L~~~~~ 322 (337)
.|. ..+.-+.+. ..-... + ..+.++|+++ -...|.+||+++++.|++.++
T Consensus 334 ~L~---~gi~v~~g~---~~~~~~~~~~~~~~~~g~~~~~~~~~iRls~~~~~~t~e~i~~~~~~l~~~~~ 398 (400)
T 3vax_A 334 TLK---DLVAVATGS---ASTSASFTPSHVLRAMGLPEEAASKSLRFSWTPGQATDLDVEELARGVAKLKP 398 (400)
T ss_dssp HHH---HHHHHTTTT---EEEEEEECCHHHHHTTTCCHHHHTSEEEEEEEEC-------------------
T ss_pred HHh---cCcEEEecc---cccCCCCCccHHHHHcCCCccccCceEEEEccCCCCCHHHHHHHHHHHHHHhc
Confidence 332 123333332 111110 0 0136899999 555589999999999987653
No 133
>3ruy_A Ornithine aminotransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha and beta protein; HET: LLP; 2.65A {Bacillus anthracis} SCOP: c.67.1.0
Probab=58.79 E-value=70 Score=29.13 Aligned_cols=87 Identities=18% Similarity=0.165 Sum_probs=52.4
Q ss_pred HHHHHHHHHHHHHHHHHhhC--CCeEEeecCCCCCCcceeeeccccCccccccccceeEEEEecCCCCCCCCCcchhhHH
Q psy2480 191 DILTFNFSLVESIRQKLSEY--PCLRILSHGPVSGLGLKEVTSQYLPVQTILESVQSCVVFQFVPKDAGWGPVPAYYDKL 268 (337)
Q Consensus 191 ~~I~~t~~La~~~~e~L~~~--p~LeiL~~~~waglg~v~~~~~~~~~~~~~~~~lsvVvFRy~P~~~~~e~~~~y~D~L 268 (337)
++.++.-+.++.+.+.+++. +.+.... ..-+.+.|.+.. .. +
T Consensus 303 ~~~~~~~~~~~~l~~~L~~~~~~~~~~~~------------------------~~g~~~~~~~~~--~~--------~-- 346 (392)
T 3ruy_A 303 KLTERSLQLGEKLVGQLKEIDNPMITEVR------------------------GKGLFIGIELNE--PA--------R-- 346 (392)
T ss_dssp THHHHHHHHHHHHHHHHTTCCCTTEEEEE------------------------EETTEEEEEESS--CS--------H--
T ss_pred hHHHHHHHHHHHHHHHHHHhcCCCceEEE------------------------eeeeEEEEEEcc--hH--------H--
Confidence 44566667888888888876 3333332 334556666532 11 1
Q ss_pred HHHHHHHHhhcCCCcceEEEEeeeCcEEEEEecCCCCChhHHHHHHHHHHHHH
Q psy2480 269 NSWLGQILQRDVPSVSLNLTETAAFGTVLRICPFECSSGGDYESFLVCLDAQV 321 (337)
Q Consensus 269 NswLgqiL~~~~~~~~~~v~et~~~G~~LRfcplnp~T~edI~~~v~~L~~~~ 321 (337)
.+.+.|.+. ++.+.. .++.++|++|--..|.+|++++++.|++.+
T Consensus 347 --~l~~~l~~~----gi~v~~--~~~~~iRi~~~~~~~~~~i~~~~~~l~~~l 391 (392)
T 3ruy_A 347 --PYCEQLKAA----GLLCKE--THENVIRIAPPLVISEEDLEWAFQKIKAVL 391 (392)
T ss_dssp --HHHHHHHTT----TEECCC--BTTTEEEECCCTTCCHHHHHHHHHHHHHHH
T ss_pred --HHHHHHHHC----CcEEec--CCCCEEEEECCCCCCHHHHHHHHHHHHHHh
Confidence 223334322 233332 234699999866669999999999998754
No 134
>1fg7_A Histidinol phosphate aminotransferase; HISC, histidine biosynthesis, pyridoxal PH montreal-kingston bacterial structural genomics initiative; HET: PMP; 1.50A {Escherichia coli} SCOP: c.67.1.1 PDB: 1fg3_A* 1gew_A* 1gex_A* 1gey_A* 1iji_A*
Probab=58.61 E-value=1.1e+02 Score=27.79 Aligned_cols=97 Identities=15% Similarity=0.198 Sum_probs=55.7
Q ss_pred hHHHHhhChhh---HHHHHHHHHHHHHHHHHHHhhCCCeEEeecCCCCCCcceeeeccccCccccccccceeEEEEecCC
Q psy2480 178 WTTLKSMGQTG---IQDILTFNFSLVESIRQKLSEYPCLRILSHGPVSGLGLKEVTSQYLPVQTILESVQSCVVFQFVPK 254 (337)
Q Consensus 178 W~~Lq~LG~d~---i~~~I~~t~~La~~~~e~L~~~p~LeiL~~~~waglg~v~~~~~~~~~~~~~~~~lsvVvFRy~P~ 254 (337)
+..+..+...+ +.++.+..-+.++.+.+.+++.+++..+. +..-+.+.+++.
T Consensus 251 ~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~-----------------------~~~~~~~~~~~~-- 305 (356)
T 1fg7_A 251 DIAAQALSPQGIVAMRERVAQIIAEREYLIAALKEIPCVEQVF-----------------------DSETNYILARFK-- 305 (356)
T ss_dssp HHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTEEEEC-----------------------CCSSSEEEEEET--
T ss_pred HHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEC-----------------------CCCCeEEEEECC--
Confidence 34444554434 55666777788889999999888643332 122334555652
Q ss_pred CCCCCCCcchhhHHHHHHHHHHhhcCCCcceEEEE-eeeCc--EEEEEecCCCCChhHHHHHHHHHHH
Q psy2480 255 DAGWGPVPAYYDKLNSWLGQILQRDVPSVSLNLTE-TAAFG--TVLRICPFECSSGGDYESFLVCLDA 319 (337)
Q Consensus 255 ~~~~e~~~~y~D~LNswLgqiL~~~~~~~~~~v~e-t~~~G--~~LRfcplnp~T~edI~~~v~~L~~ 319 (337)
+ .++ +.+.|.+. ++.+.. ....| -++|+|+- +.+|++++++.|++
T Consensus 306 --~-------~~~----l~~~L~~~----gI~v~~~g~~~~~~~~iRis~~---~~~e~~~~~~~l~~ 353 (356)
T 1fg7_A 306 --A-------SSA----VFKSLWDQ----GIILRDQNKQPSLSGCLRITVG---TREESQRVIDALRA 353 (356)
T ss_dssp --T-------HHH----HHHHHHHT----TEECEECTTSTTCTTEEEEECC---CHHHHHHHHHHHHT
T ss_pred --C-------HHH----HHHHHHHC----CEEEEECCCCCCCCCeEEEEeC---CHHHHHHHHHHHHh
Confidence 1 012 22333221 244544 22212 38999985 68999999998875
No 135
>3piu_A 1-aminocyclopropane-1-carboxylate synthase; fruit ripening, ethylene biosynthesis, lyase, pyridoxal 5'-P binding; HET: LLP PLR; 1.35A {Malus domestica} SCOP: c.67.1.4 PDB: 1m4n_A* 1m7y_A* 1ynu_A* 1b8g_A*
Probab=58.50 E-value=1.1e+02 Score=28.43 Aligned_cols=39 Identities=18% Similarity=0.122 Sum_probs=28.9
Q ss_pred eEEEEeee----CcEEEEEecCCCCChhHHHHHHHHHHHHHhhh
Q psy2480 285 LNLTETAA----FGTVLRICPFECSSGGDYESFLVCLDAQVYSG 324 (337)
Q Consensus 285 ~~v~et~~----~G~~LRfcplnp~T~edI~~~v~~L~~~~~il 324 (337)
+.+..... +..++|+|+-.. +.++|+++++.|++.++.+
T Consensus 390 i~v~~g~~~~~~~~~~iRi~~~~~-~~e~i~~~l~~l~~~l~~~ 432 (435)
T 3piu_A 390 LNISPGSSCHCTEPGWFRVCFANL-PERTLDLAMQRLKAFVGEY 432 (435)
T ss_dssp EECEEGGGGTCSSTTEEEEECSSS-CHHHHHHHHHHHHHHHHHH
T ss_pred EEEeCCcccCCCCCCEEEEEeeCC-CHHHHHHHHHHHHHHHHHH
Confidence 55555432 235999998544 8999999999999887654
No 136
>1v2d_A Glutamine aminotransferase; PLP, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.90A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1v2e_A* 1v2f_A*
Probab=57.06 E-value=51 Score=29.92 Aligned_cols=92 Identities=12% Similarity=0.013 Sum_probs=54.3
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhCCCeEEeecCCCCCCcceeeeccccCccccccccceeEEEEecCCCCCCCCCcchhh
Q psy2480 187 TGIQDILTFNFSLVESIRQKLSEYPCLRILSHGPVSGLGLKEVTSQYLPVQTILESVQSCVVFQFVPKDAGWGPVPAYYD 266 (337)
Q Consensus 187 d~i~~~I~~t~~La~~~~e~L~~~p~LeiL~~~~waglg~v~~~~~~~~~~~~~~~~lsvVvFRy~P~~~~~e~~~~y~D 266 (337)
+.+.++.++..+.++.+.+.|++ .++++... ..-..+.+++. +. |
T Consensus 274 ~~~~~~~~~~~~~~~~l~~~L~~-~g~~~~~~-----------------------~~~~~~~~~~~-~~----------~ 318 (381)
T 1v2d_A 274 GFYEALREGYRRRRDLLAGGLRA-MGLRVYVP-----------------------EGTYFLMAELP-GW----------D 318 (381)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHH-TTCCEECC-----------------------SBSSEEEEECT-TC----------C
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH-CCCEecCC-----------------------CcceEEEEecC-hH----------h
Confidence 33456667777888899999888 47777641 11223445552 11 1
Q ss_pred HHHHHHHHHHhhcCCCcceEEEEeee------CcEEEEEecCCCCChhHHHHHHHHHHHHHhhh
Q psy2480 267 KLNSWLGQILQRDVPSVSLNLTETAA------FGTVLRICPFECSSGGDYESFLVCLDAQVYSG 324 (337)
Q Consensus 267 ~LNswLgqiL~~~~~~~~~~v~et~~------~G~~LRfcplnp~T~edI~~~v~~L~~~~~il 324 (337)
+. +.+.+. ++.+..... ++.++|+|+-. +.+||+++++.|++.+..+
T Consensus 319 -~~----~~l~~~----gi~v~~g~~~~~~~~~~~~iRi~~~~--~~~~i~~~~~~l~~~l~~~ 371 (381)
T 1v2d_A 319 -AF----RLVEEA----RVALIPASAFYLEDPPKDLFRFAFCK--TEEELHLALERLGRVVNSP 371 (381)
T ss_dssp -HH----HHHHHT----CEECEEGGGGCSSSCCTTEEEEECCS--CHHHHHHHHHHHHHHC---
T ss_pred -HH----HHHHhC----CEEEecchHhCCCCCCCCEEEEEeCC--CHHHHHHHHHHHHHHHhhc
Confidence 11 222221 244544332 23599999876 8999999999998876554
No 137
>2x5f_A Aspartate_tyrosine_phenylalanine pyridoxal-5' phosphate-dependent aminotransferase...; HET: PLP EPE; 1.80A {Staphylococcus aureus}
Probab=55.90 E-value=1.2e+02 Score=28.16 Aligned_cols=30 Identities=13% Similarity=0.020 Sum_probs=24.4
Q ss_pred cEEEEEecCCCCChhHHHHHHHHHHHHHhhh
Q psy2480 294 GTVLRICPFECSSGGDYESFLVCLDAQVYSG 324 (337)
Q Consensus 294 G~~LRfcplnp~T~edI~~~v~~L~~~~~il 324 (337)
..++|+|+-. .+.++|+++++.|++.+..+
T Consensus 400 ~~~iRis~~~-~~~e~i~~~~~~l~~~l~~~ 429 (430)
T 2x5f_A 400 ATDIRIAFSC-VEKDDIPHVFDSIAKAIDDL 429 (430)
T ss_dssp SSEEEEEGGG-SCGGGHHHHHHHHHHHHHHH
T ss_pred CCeEEEEEec-CCHHHHHHHHHHHHHHHHhc
Confidence 3589999884 38899999999999877654
No 138
>2ez2_A Beta-tyrosinase, tyrosine phenol-lyase; PLP-dependent enzyme, pyridoxal-5'-phosphate, domain lyase; 1.85A {Citrobacter freundii} PDB: 2ez1_A 2vlf_A* 2vlh_A* 2yct_A* 1tpl_A 2tpl_A* 2ycn_A* 2yhk_A* 2ycp_A* 1c7g_A*
Probab=55.83 E-value=61 Score=30.38 Aligned_cols=31 Identities=3% Similarity=-0.152 Sum_probs=25.9
Q ss_pred EEEEEecCCC-CChhHHHHHHHHHHHHHhhhh
Q psy2480 295 TVLRICPFEC-SSGGDYESFLVCLDAQVYSGS 325 (337)
Q Consensus 295 ~~LRfcplnp-~T~edI~~~v~~L~~~~~il~ 325 (337)
-++|+|+-.. .+.+||+++++.|++.+....
T Consensus 401 ~~iRis~~~~~~t~e~i~~~~~~l~~~l~~~~ 432 (456)
T 2ez2_A 401 ETVRLTIPRRVYTYAHMDVVADGIIKLYQHKE 432 (456)
T ss_dssp CEEEEECCTTTCCHHHHHHHHHHHHHHHHTGG
T ss_pred CeEEEEeCCCCCCHHHHHHHHHHHHHHHhhhh
Confidence 5799998776 589999999999998876644
No 139
>1o4s_A Aspartate aminotransferase; TM1255, structural genomics, JCS protein structure initiative, joint center for structural G transferase; HET: PLP; 1.90A {Thermotoga maritima} SCOP: c.67.1.1
Probab=55.81 E-value=58 Score=29.87 Aligned_cols=24 Identities=13% Similarity=0.016 Sum_probs=20.5
Q ss_pred EEEEecCCCCChhHHHHHHHHHHHHH
Q psy2480 296 VLRICPFECSSGGDYESFLVCLDAQV 321 (337)
Q Consensus 296 ~LRfcplnp~T~edI~~~v~~L~~~~ 321 (337)
++|+|+-+ +.++|++.++.|++.+
T Consensus 363 ~~Ris~~~--~~~~l~~~l~~l~~~l 386 (389)
T 1o4s_A 363 FVRLSFAT--SIERLTEALDRIEDFL 386 (389)
T ss_dssp EEEEECCS--CHHHHHHHHHHHHHHH
T ss_pred eEEEEEeC--CHHHHHHHHHHHHHHH
Confidence 89999875 8889999999988754
No 140
>1iay_A ACC synthase 2, 1-aminocyclopropane-1-carboxylate synthase 2; protein-cofactor-inhibitor complex, V6-dependent enzyme, LYA; HET: PLP AVG; 2.70A {Solanum lycopersicum} SCOP: c.67.1.4 PDB: 1iax_A*
Probab=55.57 E-value=57 Score=30.29 Aligned_cols=99 Identities=14% Similarity=0.111 Sum_probs=55.7
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCCeEEeecCCCCCCcceeeeccccCccccccccceeEEEEecCCCCCCCCCcchhhHHH
Q psy2480 190 QDILTFNFSLVESIRQKLSEYPCLRILSHGPVSGLGLKEVTSQYLPVQTILESVQSCVVFQFVPKDAGWGPVPAYYDKLN 269 (337)
Q Consensus 190 ~~~I~~t~~La~~~~e~L~~~p~LeiL~~~~waglg~v~~~~~~~~~~~~~~~~lsvVvFRy~P~~~~~e~~~~y~D~LN 269 (337)
.++.+...+.++.+.+.|++. +++++. +..-..+.+++...... .. .+. .
T Consensus 323 ~~~~~~~~~~~~~l~~~L~~~-g~~~~~-----------------------~~~g~~~~~~~~~~~~~----~~-~~~-~ 372 (428)
T 1iay_A 323 RESAMRLGKRHKHFTNGLEVV-GIKCLK-----------------------NNAGLFCWMDLRPLLRE----ST-FDS-E 372 (428)
T ss_dssp HHHHHHHHHHHHHHHHHHHHT-TCCBCC-----------------------CSSSSEEEEECGGGCSS----SS-HHH-H
T ss_pred HHHHHHHHHHHHHHHHHHHhc-CCcccC-----------------------CCeeEEEEEechhhcCC----Cc-hhH-H
Confidence 345566667788888888887 565543 11122344555321111 00 010 1
Q ss_pred HHHHHHHhhcCCCcceEEEEeee-C---cEEEEEecCCCCChhHHHHHHHHHHHHHh
Q psy2480 270 SWLGQILQRDVPSVSLNLTETAA-F---GTVLRICPFECSSGGDYESFLVCLDAQVY 322 (337)
Q Consensus 270 swLgqiL~~~~~~~~~~v~et~~-~---G~~LRfcplnp~T~edI~~~v~~L~~~~~ 322 (337)
..+.+.|.+... +.+..... + +-++|+|+- ..+.++++++++.|++.+.
T Consensus 373 ~~l~~~l~~~~g---i~v~~~~~~~~~~~~~iRis~~-~~~~e~i~~~~~~l~~~l~ 425 (428)
T 1iay_A 373 MSLWRVIINDVK---LNVSPGSSFECQEPGWFRVCFA-NMDDGTVDIALARIRRFVG 425 (428)
T ss_dssp HHHHHHHHHTSC---EECEEGGGGTCSSSSEEEEECS-SSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCC---EEEeCchhhCCCCCCEEEEEEe-cCCHHHHHHHHHHHHHHHh
Confidence 123444443322 55554432 1 248999997 4589999999999988764
No 141
>2pb2_A Acetylornithine/succinyldiaminopimelate aminotran; ARGD, pyridoxal 5'-phosphate, arginine metabolism, lysine biosynthesis, gabaculine; HET: PLP; 1.91A {Salmonella typhimurium} PDB: 2pb0_A*
Probab=55.31 E-value=1.1e+02 Score=28.72 Aligned_cols=31 Identities=16% Similarity=0.108 Sum_probs=25.1
Q ss_pred cEEEEEecCCCCChhHHHHHHHHHHHHHhhh
Q psy2480 294 GTVLRICPFECSSGGDYESFLVCLDAQVYSG 324 (337)
Q Consensus 294 G~~LRfcplnp~T~edI~~~v~~L~~~~~il 324 (337)
+.++|++|--..|.+||+++++.|++.++.+
T Consensus 388 ~~~iRl~~~~~~t~eei~~~~~~l~~~l~~~ 418 (420)
T 2pb2_A 388 ADVMRFAPSLVVEEADIHEGMQRFAQAVGKV 418 (420)
T ss_dssp TTEEEECCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence 4589999844458999999999999877654
No 142
>3tfu_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; transferase, transferase-transferase inhibitor complex; HET: PL8; 1.94A {Mycobacterium tuberculosis} PDB: 3tft_A* 3bv0_A* 3lv2_A*
Probab=55.13 E-value=35 Score=32.91 Aligned_cols=32 Identities=6% Similarity=-0.001 Sum_probs=26.7
Q ss_pred CcEEEEEecCCCCChhHHHHHHHHHHHHHhhh
Q psy2480 293 FGTVLRICPFECSSGGDYESFLVCLDAQVYSG 324 (337)
Q Consensus 293 ~G~~LRfcplnp~T~edI~~~v~~L~~~~~il 324 (337)
.|-++||+|--..|.+||+++++.|++.+..+
T Consensus 422 ~~~~lRi~p~~~~t~eei~~~l~~L~~~l~~~ 453 (457)
T 3tfu_A 422 FRNLVYAMPPYICTPAEITQITSAMVEVARLV 453 (457)
T ss_dssp BTTEEEECCCTTCCHHHHHHHHHHHHHHHHHC
T ss_pred cCCEEEEECCCCCCHHHHHHHHHHHHHHHHHh
Confidence 34689999876779999999999999987654
No 143
>1zod_A DGD, 2,2-dialkylglycine decarboxylase; pyridoxal, cesium, lyase; HET: MES PLP; 1.80A {Burkholderia cepacia} SCOP: c.67.1.4 PDB: 1dka_A* 1m0o_A* 1m0p_A* 1m0n_A* 1zc9_A* 1zob_A* 1m0q_A* 2dkb_A* 1dgd_A* 1dge_A* 1d7u_A* 1d7s_A* 1d7r_A* 1d7v_A* 1z3z_A*
Probab=54.09 E-value=93 Score=28.86 Aligned_cols=40 Identities=23% Similarity=0.208 Sum_probs=29.8
Q ss_pred eEEEEeeeCc--EEEEEecCCCCChhHHHHHHHHHHHHHhhh
Q psy2480 285 LNLTETAAFG--TVLRICPFECSSGGDYESFLVCLDAQVYSG 324 (337)
Q Consensus 285 ~~v~et~~~G--~~LRfcplnp~T~edI~~~v~~L~~~~~il 324 (337)
+.+......| -++|++|--..|.++|+++++.|++.+..+
T Consensus 391 v~v~~~~~~~~~~~lRi~~~~~~t~~~i~~~l~~l~~~l~~~ 432 (433)
T 1zod_A 391 LSMNIVQLPGMGGVFRIAPPLTVSEDEIDLGLSLLGQAIERA 432 (433)
T ss_dssp EECCEECCTTSCCEEEECCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred CeEeccCCCCCCCEEEEECCcCCCHHHHHHHHHHHHHHHHHh
Confidence 5555544434 799998766668999999999999876543
No 144
>3ei9_A LL-diaminopimelate aminotransferase; lysine biosynthesis, pyridoxal 5' phosphat external aldimine, chloroplast, pyridox phosphate; HET: PL6; 1.55A {Arabidopsis thaliana} PDB: 3ei8_A* 3eib_A* 3ei6_A* 2z1z_A* 3ei5_A* 2z20_A* 3ei7_A 3eia_A*
Probab=53.08 E-value=80 Score=29.30 Aligned_cols=91 Identities=8% Similarity=0.032 Sum_probs=51.9
Q ss_pred HHHHHHHHHHHHHHHHHHHhhCCCeEEeecCCCCCCcceeeeccccCccccccccceeEEEEecCCCCCCCCCcchhhHH
Q psy2480 189 IQDILTFNFSLVESIRQKLSEYPCLRILSHGPVSGLGLKEVTSQYLPVQTILESVQSCVVFQFVPKDAGWGPVPAYYDKL 268 (337)
Q Consensus 189 i~~~I~~t~~La~~~~e~L~~~p~LeiL~~~~waglg~v~~~~~~~~~~~~~~~~lsvVvFRy~P~~~~~e~~~~y~D~L 268 (337)
+.++.+.--+.++.+.+.+++. ++++.. +.....+.+.+. +.+
T Consensus 331 ~~~~~~~~~~~~~~l~~~L~~~-g~~~~~-----------------------~~~~~~~~~~~~--~~~----------- 373 (432)
T 3ei9_A 331 MHKVIGFYKENTNIIIDTFTSL-GYDVYG-----------------------GKNAPYVWVHFP--NQS----------- 373 (432)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHT-TCCEEE-----------------------CSSSSEEEEECT--TSC-----------
T ss_pred HHHHHHHHHHHHHHHHHHHHHC-CceecC-----------------------CCcceEEEEECC--CCC-----------
Confidence 4455566667778888888877 677664 122233445542 211
Q ss_pred HHHHHHHHhhcCCCcceEEEEeee----CcEEEEEecCCCCChhHHHHHHHHHHHHH
Q psy2480 269 NSWLGQILQRDVPSVSLNLTETAA----FGTVLRICPFECSSGGDYESFLVCLDAQV 321 (337)
Q Consensus 269 NswLgqiL~~~~~~~~~~v~et~~----~G~~LRfcplnp~T~edI~~~v~~L~~~~ 321 (337)
...+.+.+.+.. ++.+..... +.-++|+|..+ +.++|++.++.|++.-
T Consensus 374 ~~~~~~~ll~~~---gv~v~~g~~f~~~~~~~iRis~~~--~~e~l~~~l~rl~~~~ 425 (432)
T 3ei9_A 374 SWDVFAEILEKT---HVVTTPGSGFGPGGEGFVRVSAFG--HRENILEACRRFKQLY 425 (432)
T ss_dssp HHHHHHHHHHHH---CEECEEGGGGCGGGTTEEEEECCS--CHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHC---CEEEeCchHhCCCCCCEEEEEecC--CHHHHHHHHHHHHHHh
Confidence 011223332222 244544332 23589999633 7899999999988753
No 145
>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii}
Probab=52.98 E-value=43 Score=30.34 Aligned_cols=25 Identities=16% Similarity=0.056 Sum_probs=21.1
Q ss_pred EEEEEecCCCCChhHHHHHHHHHHHHH
Q psy2480 295 TVLRICPFECSSGGDYESFLVCLDAQV 321 (337)
Q Consensus 295 ~~LRfcplnp~T~edI~~~v~~L~~~~ 321 (337)
-++|+|+- .+.++|++.++.|++.+
T Consensus 344 ~~~Ri~~~--~~~~~i~~~~~~l~~~l 368 (370)
T 2z61_A 344 NYIRISYA--NSYENIKEGLERIKEFL 368 (370)
T ss_dssp SBEEEECC--SCHHHHHHHHHHHHHHH
T ss_pred CEEEEEEe--CCHHHHHHHHHHHHHHH
Confidence 58999998 47889999999988754
No 146
>2x5d_A Probable aminotransferase; HET: LLP PLP; 2.25A {Pseudomonas aeruginosa}
Probab=52.28 E-value=74 Score=29.33 Aligned_cols=28 Identities=11% Similarity=0.101 Sum_probs=23.7
Q ss_pred EEEEEecCCCCChhHHHHHHHHHHHHHhhh
Q psy2480 295 TVLRICPFECSSGGDYESFLVCLDAQVYSG 324 (337)
Q Consensus 295 ~~LRfcplnp~T~edI~~~v~~L~~~~~il 324 (337)
-++|+|+-. +.++|++.++.|++.+..+
T Consensus 371 ~~iRis~~~--~~~~l~~~l~~l~~~l~~~ 398 (412)
T 2x5d_A 371 DHVRFALIE--NRDRLRQAVRGIKAMFRAD 398 (412)
T ss_dssp TEEEEECCS--CHHHHHHHHHHHHHHHHHT
T ss_pred CeEEEEecC--CHHHHHHHHHHHHHHHHhc
Confidence 589999976 7889999999998887654
No 147
>2oqx_A Tryptophanase; lyase, pyridoxal phosphate, tryptophan catabolism; HET: CME EPE; 1.90A {Escherichia coli} SCOP: c.67.1.2 PDB: 2c44_A 2v1p_A* 2v0y_A*
Probab=51.54 E-value=81 Score=29.56 Aligned_cols=31 Identities=6% Similarity=0.061 Sum_probs=27.1
Q ss_pred EEEEEecCCC-CChhHHHHHHHHHHHHHhhhh
Q psy2480 295 TVLRICPFEC-SSGGDYESFLVCLDAQVYSGS 325 (337)
Q Consensus 295 ~~LRfcplnp-~T~edI~~~v~~L~~~~~il~ 325 (337)
.++||++-.. .|.+||+++++.|++.+..+.
T Consensus 412 ~~iRl~~~~~~~t~e~i~~~~~~l~~~l~~~~ 443 (467)
T 2oqx_A 412 ELLRLTIPRATYTQTHMDFIIEAFKHVKENAA 443 (467)
T ss_dssp CEEEECCCTTTSCHHHHHHHHHHHHHHHHSGG
T ss_pred CeEEEEecCCCCCHHHHHHHHHHHHHHHhhhh
Confidence 5899999887 799999999999999887654
No 148
>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica}
Probab=50.67 E-value=60 Score=28.96 Aligned_cols=89 Identities=13% Similarity=-0.030 Sum_probs=53.3
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhCCCeEEeecCCCCCCcceeeeccccCccccccccceeEEEEecCCCCCCCCCcchhh
Q psy2480 187 TGIQDILTFNFSLVESIRQKLSEYPCLRILSHGPVSGLGLKEVTSQYLPVQTILESVQSCVVFQFVPKDAGWGPVPAYYD 266 (337)
Q Consensus 187 d~i~~~I~~t~~La~~~~e~L~~~p~LeiL~~~~waglg~v~~~~~~~~~~~~~~~~lsvVvFRy~P~~~~~e~~~~y~D 266 (337)
+.+.++.++.-+.++.+.+.+++. ++++.. ..-+.+.+++.. + .+
T Consensus 260 ~~~~~~~~~~~~~~~~l~~~l~~~-~~~~~~------------------------~~~~~~~~~~~~---~-------~~ 304 (354)
T 3ly1_A 260 AFITYSKKSNDVSRQILLKALEDL-KLPYLP------------------------SEGNFVFHQLVV---P-------LK 304 (354)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH-TCCBCC------------------------CCSSEEEEECSS---C-------HH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHC-CCeECC------------------------CCceEEEEECCC---C-------HH
Confidence 345566677777888888888876 555442 122334555532 1 12
Q ss_pred HHHHHHHHHHhhcCCCcceEEEEeee--CcEEEEEecCCCCChhHHHHHHHHHHHHHh
Q psy2480 267 KLNSWLGQILQRDVPSVSLNLTETAA--FGTVLRICPFECSSGGDYESFLVCLDAQVY 322 (337)
Q Consensus 267 ~LNswLgqiL~~~~~~~~~~v~et~~--~G~~LRfcplnp~T~edI~~~v~~L~~~~~ 322 (337)
+ +.+.|.+. ++.+. ... .+.++|+|.. |.+|++++++.|++.++
T Consensus 305 ~----~~~~l~~~----gi~v~-g~~~~~~~~iRis~~---~~~~i~~~~~~l~~~l~ 350 (354)
T 3ly1_A 305 D----YQTHMADA----GVLIG-RAFPPADNWCRISLG---TPQEMQWVADTMREFRK 350 (354)
T ss_dssp H----HHHHHHHT----TEECC-CCCTTCTTEEEEECC---CHHHHHHHHHHHHHHHH
T ss_pred H----HHHHHHHC----CEEEe-ecCCCCCCEEEEEcC---CHHHHHHHHHHHHHHHH
Confidence 2 22333331 24444 222 2359999964 78999999999998765
No 149
>3b8x_A WBDK, pyridoxamine 5-phosphate-dependent dehydrase; aspartate aminotransferase, colitose, perosamine, O-antigen, pyridoxal phosphate,; HET: G4M; 1.70A {Escherichia coli} PDB: 2gms_A* 2gmu_A* 2r0t_A* 3gr9_A*
Probab=50.36 E-value=70 Score=29.25 Aligned_cols=115 Identities=10% Similarity=0.058 Sum_probs=0.0
Q ss_pred ccCcchhhHHHHhhChhhHHHHHHHHHHHHHHHHHHHhhCCCeEEeecCCCCCCcceeeeccccCccccccccceeEEEE
Q psy2480 171 KAIALPVWTTLKSMGQTGIQDILTFNFSLVESIRQKLSEYPCLRILSHGPVSGLGLKEVTSQYLPVQTILESVQSCVVFQ 250 (337)
Q Consensus 171 r~~AL~lW~~Lq~LG~d~i~~~I~~t~~La~~~~e~L~~~p~LeiL~~~~waglg~v~~~~~~~~~~~~~~~~lsvVvFR 250 (337)
+...+..++.+..+ +.+-+++++..++++.+.+.|++.|++++..... ....-.+.++
T Consensus 252 ~~~~~~aa~~l~~l--~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~--------------------~~~~~~~~i~ 309 (390)
T 3b8x_A 252 RPLEMSGAIGIEQL--KKLPRFISVRRKNAEYFLDKFKDHPYLDVQQETG--------------------ESSWFGFSFI 309 (390)
T ss_dssp CCCHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHTTCSSEEECCCCS--------------------BCCCCEEEEE
T ss_pred CcCHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCC--------------------CcccEEEEEE
Q ss_pred ecCC-CCCCCCCcchhhHHHHHHHHHHhhcCCCcce----EEEEe-eeCc------------------EEEEEecCCCCC
Q psy2480 251 FVPK-DAGWGPVPAYYDKLNSWLGQILQRDVPSVSL----NLTET-AAFG------------------TVLRICPFECSS 306 (337)
Q Consensus 251 y~P~-~~~~e~~~~y~D~LNswLgqiL~~~~~~~~~----~v~et-~~~G------------------~~LRfcplnp~T 306 (337)
+.++ +.+ ...+.+.|.+.+=.... .++.. .... ..||++.-...|
T Consensus 310 ~~~~~~~~-----------~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~t 378 (390)
T 3b8x_A 310 IKKDSGVI-----------RKQLVENLNSAGIECRPIVTGNFLKNTDVLKYFDYTVHNNVDNAEYLDKNGLFVGNHQIEL 378 (390)
T ss_dssp ECTTSCCC-----------HHHHHHHHHHTTBCCBCSTTSSGGGCHHHHTTCEEEESSCCHHHHHHHHHEEEEECCSSCC
T ss_pred ecCcCccc-----------HHHHHHHHHHCCCCeeeecCCchhhcchhhhcCCCCCcCCChHHHHHhcCEEEeeCCCCCC
Q ss_pred hhHHHHHHHHHH
Q psy2480 307 GGDYESFLVCLD 318 (337)
Q Consensus 307 ~edI~~~v~~L~ 318 (337)
.+||+.+++.|+
T Consensus 379 ~~di~~i~~~l~ 390 (390)
T 3b8x_A 379 FDEIDYLREVLK 390 (390)
T ss_dssp HHHHHHHHHHTC
T ss_pred HHHHHHHHHhhC
No 150
>1ax4_A Tryptophanase; tryptophan biosynthesis, tryptophan indole-lyase, pyridoxal 5'-phosphate, monovalent cation binding site; HET: LLP; 2.10A {Proteus vulgaris} SCOP: c.67.1.2
Probab=49.78 E-value=43 Score=31.51 Aligned_cols=30 Identities=7% Similarity=-0.095 Sum_probs=25.1
Q ss_pred EEEEEecCCC-CChhHHHHHHHHHHHHHhhh
Q psy2480 295 TVLRICPFEC-SSGGDYESFLVCLDAQVYSG 324 (337)
Q Consensus 295 ~~LRfcplnp-~T~edI~~~v~~L~~~~~il 324 (337)
.++|||+-.. .|.+||+++++.|++.+..+
T Consensus 411 ~~iRls~~~~~~t~e~i~~~~~~l~~~~~~~ 441 (467)
T 1ax4_A 411 EFMRLTIARRVYTNDHMDYIADALIGLKEKF 441 (467)
T ss_dssp CEEEEECCTTSSCHHHHHHHHHHHHTTHHHH
T ss_pred ceEEEecccccCCHHHHHHHHHHHHHHHHhh
Confidence 5999998754 58999999999999877664
No 151
>2o1b_A Aminotransferase, class I; aminotrasferase; HET: PLP; 1.95A {Staphylococcus aureus}
Probab=49.56 E-value=1.1e+02 Score=28.35 Aligned_cols=27 Identities=15% Similarity=0.132 Sum_probs=22.1
Q ss_pred EEEEEecCCCCChhHHHHHHHHHHHHHhh
Q psy2480 295 TVLRICPFECSSGGDYESFLVCLDAQVYS 323 (337)
Q Consensus 295 ~~LRfcplnp~T~edI~~~v~~L~~~~~i 323 (337)
-++|+|+-. +.++|++.++.|++.++.
T Consensus 376 ~~iRis~~~--~~e~l~~~l~~l~~~l~~ 402 (404)
T 2o1b_A 376 RYVRISLAL--DDQKLDEAAIRLTELAYL 402 (404)
T ss_dssp TEEEEECCS--CTTHHHHHHHHHHGGGGG
T ss_pred CeEEEEEcC--CHHHHHHHHHHHHHHHHh
Confidence 589999976 678999999998876553
No 152
>2vyc_A Biodegradative arginine decarboxylase; pyridoxal phosphate, PLP-dependent E lyase, acid resistance; HET: LLP; 2.4A {Escherichia coli}
Probab=48.83 E-value=61 Score=33.92 Aligned_cols=30 Identities=7% Similarity=-0.036 Sum_probs=25.6
Q ss_pred HHHHHHHHHHHHHHHHHHHhhCCC---------eEEeec
Q psy2480 189 IQDILTFNFSLVESIRQKLSEYPC---------LRILSH 218 (337)
Q Consensus 189 i~~~I~~t~~La~~~~e~L~~~p~---------LeiL~~ 218 (337)
..+++++..++++.+++.+++.++ ++++.+
T Consensus 443 g~~~~~~~~~~a~~~r~~L~~l~~~~~~~~~~~~~~~~~ 481 (755)
T 2vyc_A 443 GLSLTQEVIDEAVDFRQAMARLYKEFTADGSWFFKPWNK 481 (755)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCEESSC
T ss_pred HHHHHHHHHHHHHHHHHHHHhccccccccccceeeccCc
Confidence 457889999999999999999888 887763
No 153
>3h7f_A Serine hydroxymethyltransferase 1; cytoplasm, one-carbon metabolism, pyridoxal phosphate, structural genomics; HET: LLP; 1.50A {Mycobacterium tuberculosis}
Probab=48.53 E-value=48 Score=31.48 Aligned_cols=100 Identities=10% Similarity=0.075 Sum_probs=55.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhC----CCeEEeecCCCCCCcceeeeccccCccccccccceeEEEEecCCCCCCCCCc
Q psy2480 187 TGIQDILTFNFSLVESIRQKLSEY----PCLRILSHGPVSGLGLKEVTSQYLPVQTILESVQSCVVFQFVPKDAGWGPVP 262 (337)
Q Consensus 187 d~i~~~I~~t~~La~~~~e~L~~~----p~LeiL~~~~waglg~v~~~~~~~~~~~~~~~~lsvVvFRy~P~~~~~e~~~ 262 (337)
+.+.++.++..+.++.+.+.|++. ++++++.. ......+.+.+.+.+.+ .
T Consensus 298 ~~~~~~~~~~~~~~~~l~~~L~~~~~~~~g~~~~~~----------------------~~~~~~~~~~~~~~~~~----~ 351 (447)
T 3h7f_A 298 PEFADRQRRTLSGARIIADRLMAPDVAKAGVSVVSG----------------------GTDVHLVLVDLRDSPLD----G 351 (447)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTSHHHHHTTCEEGGG----------------------SCSSSEEEEECTTSSCC----H
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccccCCCeEEecC----------------------CCCCCEEEEEcCCCCCC----H
Confidence 355667777888888888888766 57777641 11223444555444322 0
Q ss_pred chhhHHHHHHHHHHhhcCCCcceEEE----Ee----eeCcEEEEEecCCC----CChhHHHHHHHHHHHHHhh
Q psy2480 263 AYYDKLNSWLGQILQRDVPSVSLNLT----ET----AAFGTVLRICPFEC----SSGGDYESFLVCLDAQVYS 323 (337)
Q Consensus 263 ~y~D~LNswLgqiL~~~~~~~~~~v~----et----~~~G~~LRfcplnp----~T~edI~~~v~~L~~~~~i 323 (337)
+. +.+.|.+. ++.+. .. .....++|+++-.. .+++||+++++.|++.+..
T Consensus 352 ---~~----~~~~l~~~----GI~v~~~~i~~~~~~p~~~~~lRig~~~~~~~~~~~eei~~~~~~l~~~l~~ 413 (447)
T 3h7f_A 352 ---QA----AEDLLHEV----GITVNRNAVPNDPRPPMVTSGLRIGTPALATRGFGDTEFTEVADIIATALAT 413 (447)
T ss_dssp ---HH----HHHHHHHT----TEECBC-------------CEEEEECHHHHHHTCCHHHHHHHHHHHHHHHHS
T ss_pred ---HH----HHHHHHHC----CeEEecccCCCCCCCCCCCCceeccCHHHhhCCCCHHHHHHHHHHHHHHHhc
Confidence 11 22233321 12222 11 12234799976433 2689999999999887654
No 154
>3kki_A CAI-1 autoinducer synthase; quorum sensing, CQSA, P virulence, acyltransferase, aminotransferase, pyridoxal PHO transferase; HET: PLP; 1.80A {Vibrio cholerae} PDB: 3hqt_A* 2wk9_A* 2wk8_A* 2wka_A* 2wk7_A
Probab=47.61 E-value=66 Score=29.63 Aligned_cols=30 Identities=7% Similarity=0.052 Sum_probs=25.8
Q ss_pred cEEEEEecCCCCChhHHHHHHHHHHHHHhh
Q psy2480 294 GTVLRICPFECSSGGDYESFLVCLDAQVYS 323 (337)
Q Consensus 294 G~~LRfcplnp~T~edI~~~v~~L~~~~~i 323 (337)
..++||++-...|.+||+++++.|++.++.
T Consensus 374 ~~~iRi~~~~~~t~e~i~~~~~~l~~~l~~ 403 (409)
T 3kki_A 374 KNIIRLSLNSDVNDEQIAKIIEVCSDAVNY 403 (409)
T ss_dssp CEEEEEECCTTCCHHHHHHHHHHHHHHHHH
T ss_pred CcEEEEEccCCCCHHHHHHHHHHHHHHHhc
Confidence 479999988777999999999999987654
No 155
>3hl2_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine, sepsecs, protein-RNA complex, alternative splicing, cytoplasm, protein biosynthesis, pyridoxal phosphate, selenium; HET: PLR SEP; 2.81A {Homo sapiens}
Probab=47.16 E-value=9 Score=38.97 Aligned_cols=40 Identities=20% Similarity=0.295 Sum_probs=36.9
Q ss_pred hchhhHHHHHhcCchhHHHHHHHHHHHHHHHHHhhccCCc
Q psy2480 35 IALPVWTTLKSMGQTGIQDILTFNFSLVESVRQKLSEYPC 74 (337)
Q Consensus 35 ~aLplW~alQ~Lg~~~I~~ri~~Af~ls~~l~~~L~~~~~ 74 (337)
.++-+|.+|++||++|..+.++...++.+.+.+.|++++.
T Consensus 318 psldl~~tLL~lGr~Gy~~ll~e~~ela~~L~~~L~~la~ 357 (501)
T 3hl2_A 318 PSLDVLITLLSLGSNGYKKLLKERKEMFSYLSNQIKKLSE 357 (501)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4566999999999999999999999999999999999876
No 156
>1wyu_A Glycine dehydrogenase (decarboxylating) subunit 1; alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_A* 1wyv_A*
Probab=46.13 E-value=18 Score=34.22 Aligned_cols=39 Identities=18% Similarity=0.336 Sum_probs=34.9
Q ss_pred HHHHHhcCchhHHHHHHHHHHHHHHHHHhhccCCceEEe
Q psy2480 40 WTTLKSMGQTGIQDILTFNFSLVESVRQKLSEYPCLRIL 78 (337)
Q Consensus 40 W~alQ~Lg~~~I~~ri~~Af~ls~~l~~~L~~~~~I~il 78 (337)
|..+.++|.+++.++.++...+.+.+.+.|++++++++.
T Consensus 331 a~~l~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~g~~~~ 369 (438)
T 1wyu_A 331 AMYLAALGPEGLREVALKSVEMAHKLHALLLEVPGVRPF 369 (438)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTCEEC
T ss_pred HHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEC
Confidence 444888999999999999999999999999999999988
No 157
>4e3q_A Pyruvate transaminase; aminotransferase, transferase; HET: PMP; 1.90A {Vibrio fluvialis} PDB: 4e3r_A* 3nui_A
Probab=45.93 E-value=77 Score=31.26 Aligned_cols=33 Identities=12% Similarity=0.184 Sum_probs=26.3
Q ss_pred cEEEEEecCCCCChhHHHHHHHHHHHHHhhhhc
Q psy2480 294 GTVLRICPFECSSGGDYESFLVCLDAQVYSGSQ 326 (337)
Q Consensus 294 G~~LRfcplnp~T~edI~~~v~~L~~~~~il~~ 326 (337)
|-++||+|=-..|.+||+++++.|++.++.+-+
T Consensus 438 g~~i~l~PPL~it~~eid~~~~~l~~al~~v~a 470 (473)
T 4e3q_A 438 GQSVVLCPPFILTEAQMDEMFDKLEKALDKVFA 470 (473)
T ss_dssp TTEEEECCCTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 457899984445899999999999998877654
No 158
>3pj0_A LMO0305 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, lyase; HET: LLP MSE; 1.80A {Listeria monocytogenes}
Probab=45.89 E-value=1.2e+02 Score=26.96 Aligned_cols=94 Identities=9% Similarity=0.154 Sum_probs=55.2
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCCeEEeecCCCCCCcceeeeccccCccccccccceeEEEEecCCCCCCCCCcchhhHHH
Q psy2480 190 QDILTFNFSLVESIRQKLSEYPCLRILSHGPVSGLGLKEVTSQYLPVQTILESVQSCVVFQFVPKDAGWGPVPAYYDKLN 269 (337)
Q Consensus 190 ~~~I~~t~~La~~~~e~L~~~p~LeiL~~~~waglg~v~~~~~~~~~~~~~~~~lsvVvFRy~P~~~~~e~~~~y~D~LN 269 (337)
.+++++..+.++.+.+.|++.|++++... +...+.+.|++..++. ...+.+.
T Consensus 257 ~~~~~~~~~~~~~l~~~L~~~~g~~~~~~----------------------~~~~~~~~~~~~~~~~------~~~~~l~ 308 (359)
T 3pj0_A 257 IGKMAEYFEAAKGLAERFNSCSGVKTVPE----------------------VPVSNMFHVYFENSAD------EIGAILT 308 (359)
T ss_dssp GGGHHHHHHHHHHHHHHHHTSTTEEEESS----------------------SCSSSEEEEEESSCHH------HHHHHHH
T ss_pred HHHhHHHHHHHHHHHHHHhhCCCceeecc----------------------CCcceEEEEEecCccc------hhHHHHH
Confidence 36677778888999999999999988631 2344556666632210 0112222
Q ss_pred HHHHHHHhhcCCCcceEEEEee---eCc-EEEEEecCCCC---ChhHHHHHHHHHHH
Q psy2480 270 SWLGQILQRDVPSVSLNLTETA---AFG-TVLRICPFECS---SGGDYESFLVCLDA 319 (337)
Q Consensus 270 swLgqiL~~~~~~~~~~v~et~---~~G-~~LRfcplnp~---T~edI~~~v~~L~~ 319 (337)
+.+.+. ++.+.... ..| .++|++.-.+. +.+++++.++.|.+
T Consensus 309 ----~~l~~~----GV~v~~g~~~~~~~~~~~r~~i~~~~~~~~~e~l~~~l~~l~~ 357 (359)
T 3pj0_A 309 ----KIQDET----GVGISGYLQEKSADVCAFEVSVGDAFAEIPAKNLELVFRCLEK 357 (359)
T ss_dssp ----HHHHHH----CEECCSCCEEEETTEEEEEEECCTTGGGSCHHHHHHHHHHHHH
T ss_pred ----HHHHhc----CcEecCCccccCCCceEEEEEecCccccCCHHHHHHHHHHHHh
Confidence 333221 13333221 234 58999886653 67888888887765
No 159
>1c4k_A Protein (ornithine decarboxylase); lyase; HET: PLP GTP; 2.70A {Lactobacillus SP} SCOP: c.23.1.4 c.67.1.5 d.125.1.1 PDB: 1ord_A*
Probab=45.75 E-value=2.4e+02 Score=29.45 Aligned_cols=29 Identities=14% Similarity=0.012 Sum_probs=25.1
Q ss_pred HHHHHHHHHHHHHHHHHHHhh-CCCeEEee
Q psy2480 189 IQDILTFNFSLVESIRQKLSE-YPCLRILS 217 (337)
Q Consensus 189 i~~~I~~t~~La~~~~e~L~~-~p~LeiL~ 217 (337)
-.+++++..++++.+.+.+++ .++++++.
T Consensus 417 g~~~~~~~~~~a~~lr~~L~~~i~g~~v~~ 446 (730)
T 1c4k_A 417 GRKLWHDLLITTIEARKKLIKAGSMFRPFV 446 (730)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCSSEESS
T ss_pred hHHHHHHHHHHHHHHHHHHhhhCCCeEEcc
Confidence 356788899999999999998 89999975
No 160
>3asa_A LL-diaminopimelate aminotransferase; PLP dependent aminotransferase; 2.05A {Chlamydia trachomatis} PDB: 3asb_A*
Probab=44.70 E-value=66 Score=29.59 Aligned_cols=28 Identities=11% Similarity=-0.051 Sum_probs=19.0
Q ss_pred EEEEEecCCCCChhHHHHHHHHHHHHHhhh
Q psy2480 295 TVLRICPFECSSGGDYESFLVCLDAQVYSG 324 (337)
Q Consensus 295 ~~LRfcplnp~T~edI~~~v~~L~~~~~il 324 (337)
.++|+|. ..+.++|+++++.|++.++..
T Consensus 366 ~~iRis~--~~~~e~i~~~l~~l~~~~~~~ 393 (400)
T 3asa_A 366 GFVRFSS--LGKREDILAACERLQMAPALQ 393 (400)
T ss_dssp TCEEEEC--CSCHHHHHHHHHHHHC-----
T ss_pred CEEEEEe--eCCHHHHHHHHHHHHHHHHhh
Confidence 5899993 237899999999998776543
No 161
>2z67_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine biosynthesis, seven-stranded BETE-strand, PYR 5'-phosphate; HET: PLP; 2.50A {Methanococcus maripaludis} SCOP: c.67.1.9
Probab=43.98 E-value=8.6 Score=37.05 Aligned_cols=43 Identities=14% Similarity=0.184 Sum_probs=38.9
Q ss_pred chhhHHHHHhcCchhHHHHHHHHHHHHHHHHHhhccCC---ceEEe
Q psy2480 36 ALPVWTTLKSMGQTGIQDILTFNFSLVESVRQKLSEYP---CLRIL 78 (337)
Q Consensus 36 aLplW~alQ~Lg~~~I~~ri~~Af~ls~~l~~~L~~~~---~I~il 78 (337)
++.+|.++.++|.+++.+++++...+.+.+.+.|++++ ++++.
T Consensus 333 ~~~~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~v~ 378 (456)
T 2z67_A 333 VVNTLVSLLSMGSKNYLELVKNQKNSKKLLDELLNDLSKKTGGKFL 378 (456)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCCBC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCEec
Confidence 77899999999999999999999999999999999986 66555
No 162
>2oat_A Ornithine aminotransferase; 5-fluoromethylornithine, PLP-dependent ENZ pyridoxal phosphate; HET: PFM; 1.95A {Homo sapiens} SCOP: c.67.1.4 PDB: 1oat_A* 2byj_A* 2byl_A* 1gbn_A* 2can_A*
Probab=43.89 E-value=2.1e+02 Score=26.93 Aligned_cols=30 Identities=10% Similarity=0.282 Sum_probs=24.5
Q ss_pred CcEEEEEecCCCCChhHHHHHHHHHHHHHh
Q psy2480 293 FGTVLRICPFECSSGGDYESFLVCLDAQVY 322 (337)
Q Consensus 293 ~G~~LRfcplnp~T~edI~~~v~~L~~~~~ 322 (337)
++-++|++|--..|.+||+++++.|++.+.
T Consensus 408 ~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~ 437 (439)
T 2oat_A 408 HGDIIRFAPPLVIKEDELRESIEIINKTIL 437 (439)
T ss_dssp SSSEEEECCCTTCCHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECccCCCHHHHHHHHHHHHHHHH
Confidence 356899998555589999999999988764
No 163
>2a7v_A Serine hydroxymethyltransferase; structural genomics, structural genomics consortium, SGC; 2.04A {Homo sapiens} PDB: 3ou5_A
Probab=42.65 E-value=89 Score=30.95 Aligned_cols=98 Identities=14% Similarity=0.175 Sum_probs=58.7
Q ss_pred HHHHHHHHHHHHHHHHHHHhhCCCeEEeecCCCCCCcceeeeccccCccccccccceeEEEEecCCCCCCCCCcchhhHH
Q psy2480 189 IQDILTFNFSLVESIRQKLSEYPCLRILSHGPVSGLGLKEVTSQYLPVQTILESVQSCVVFQFVPKDAGWGPVPAYYDKL 268 (337)
Q Consensus 189 i~~~I~~t~~La~~~~e~L~~~p~LeiL~~~~waglg~v~~~~~~~~~~~~~~~~lsvVvFRy~P~~~~~e~~~~y~D~L 268 (337)
..++.++-.+.++.+.+.|.+. +++++.. ......+.+.+.+.+.+ .++
T Consensus 333 ~~~~~~~~~~na~~L~~~L~~~-G~~v~~~----------------------~t~t~lv~vdl~~~g~~-------~~~- 381 (490)
T 2a7v_A 333 FREYSLQVLKNARAMADALLER-GYSLVSG----------------------GTDNHLVLVDLRPKGLD-------GAR- 381 (490)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHT-TCEEGGG----------------------SCSSSEEEEECTTTTCC-------HHH-
T ss_pred HHHHHHHHHHHHHHHHHHHHHc-CcEEecC----------------------CCCCeEEEEEeCCCCCC-------HHH-
Confidence 3456677788899999998885 8888751 12234566666554432 022
Q ss_pred HHHHHHHHhhcCCCcceEEEEee-------eCcEEEEEec--CCCC--ChhHHHHHHHHHHHHHhhh
Q psy2480 269 NSWLGQILQRDVPSVSLNLTETA-------AFGTVLRICP--FECS--SGGDYESFLVCLDAQVYSG 324 (337)
Q Consensus 269 NswLgqiL~~~~~~~~~~v~et~-------~~G~~LRfcp--lnp~--T~edI~~~v~~L~~~~~il 324 (337)
+.+.|.+. ++.+.... ....-||++. +..+ +++|++.+++.|.+.+...
T Consensus 382 ---~~~~L~~~----GI~v~~~~~p~d~~p~~~~~iRig~~a~t~~g~~~~d~~~~~~~i~~~l~~~ 441 (490)
T 2a7v_A 382 ---AERVLELV----SITANKNTCPGDRSAITPGGLRLGAPALTSRQFREDDFRRVVDFIDEGVNIG 441 (490)
T ss_dssp ---HHHHHHHT----TEECEEECCTTCCCSSSCSEEEEESHHHHHTTCCHHHHHHHHHHHHHHHHHH
T ss_pred ---HHHHHHhC----CeEEecCccCCCCCCCCCCceEecccccccCCCCHHHHHHHHHHHHHHHHhh
Confidence 22344322 23333211 1224699966 4444 7999999999998877653
No 164
>2eo5_A 419AA long hypothetical aminotransferase; PLP enzyme, structural genomics, NPPSFA, N project on protein structural and functional analyses; HET: PLP; 1.90A {Sulfolobus tokodaii}
Probab=42.58 E-value=64 Score=30.13 Aligned_cols=30 Identities=17% Similarity=0.104 Sum_probs=24.5
Q ss_pred cEEEEEecCCCCChhHHHHHHHHHHHHHhh
Q psy2480 294 GTVLRICPFECSSGGDYESFLVCLDAQVYS 323 (337)
Q Consensus 294 G~~LRfcplnp~T~edI~~~v~~L~~~~~i 323 (337)
+-++|++|--..|.++++++++.|++.++.
T Consensus 388 ~~~lRis~~~~~t~e~i~~~l~~l~~~l~~ 417 (419)
T 2eo5_A 388 RSAIRVIPPLVISEEEAKQGLDILKKVIKV 417 (419)
T ss_dssp TTEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCCCHHHHHHHHHHHHHHHHh
Confidence 458999875555899999999999987654
No 165
>3ihj_A Alanine aminotransferase 2; helix, structural genomics, structural genomics consortium, pyridoxal phosphate; HET: PLP; 2.30A {Homo sapiens}
Probab=41.97 E-value=1.1e+02 Score=29.77 Aligned_cols=29 Identities=7% Similarity=-0.064 Sum_probs=23.6
Q ss_pred EEEEEecCCCCChhHHHHHHHHHHHHHhhhh
Q psy2480 295 TVLRICPFECSSGGDYESFLVCLDAQVYSGS 325 (337)
Q Consensus 295 ~~LRfcplnp~T~edI~~~v~~L~~~~~il~ 325 (337)
.++|+|.. .+.++++++++.|.+....+.
T Consensus 466 ~~~Ris~~--~~~e~l~~~i~~L~~~~~~~~ 494 (498)
T 3ihj_A 466 YHFRMTIL--PPVEKLKTVLQKVKDFHINFL 494 (498)
T ss_dssp CBEEEECC--SCHHHHHHHHHHHHHHHHHHH
T ss_pred CEEEEEeC--CCHHHHHHHHHHHHHHHHHHH
Confidence 48999995 578999999999988776543
No 166
>3fvs_A Kynurenine--oxoglutarate transaminase 1; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: LLP; 1.50A {Homo sapiens} SCOP: c.67.1.1 PDB: 3fvu_A* 3fvx_A* 1w7l_A* 1w7m_A* 1w7n_A*
Probab=41.76 E-value=71 Score=29.36 Aligned_cols=28 Identities=11% Similarity=0.122 Sum_probs=23.1
Q ss_pred cEEEEEecCCCCChhHHHHHHHHHHHHHhh
Q psy2480 294 GTVLRICPFECSSGGDYESFLVCLDAQVYS 323 (337)
Q Consensus 294 G~~LRfcplnp~T~edI~~~v~~L~~~~~i 323 (337)
..++|+|+-. +.++|++.++.|++.++.
T Consensus 394 ~~~iRis~~~--~~e~i~~~l~~l~~~l~~ 421 (422)
T 3fvs_A 394 DHYIRFCFVK--DEATLQAMDEKLRKWKVE 421 (422)
T ss_dssp CSEEEEECCC--CHHHHHHHHHHHHHHHHC
T ss_pred CCeEEEEecC--CHHHHHHHHHHHHHHHhh
Confidence 3699999665 999999999999987653
No 167
>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A*
Probab=41.60 E-value=13 Score=33.47 Aligned_cols=31 Identities=10% Similarity=-0.037 Sum_probs=25.4
Q ss_pred cEEEE-EecCCC-CChhHHHHHHHHHHHHHhhh
Q psy2480 294 GTVLR-ICPFEC-SSGGDYESFLVCLDAQVYSG 324 (337)
Q Consensus 294 G~~LR-fcplnp-~T~edI~~~v~~L~~~~~il 324 (337)
..++| +|+-.. .+.+||+.+++.|++.+..+
T Consensus 338 ~~~iRii~~~~~~~~~~~i~~~~~~l~~~~~~~ 370 (371)
T 2e7j_A 338 PGLTRYFKLSTYGLSDEEVDYVLNAFKEIIEKY 370 (371)
T ss_dssp TTCCSEEEEECTTCCHHHHHHHHHHHHHHHHHC
T ss_pred CCceEEEEeeccCCCHHHHHHHHHHHHHHHHhc
Confidence 35799 998776 68999999999999876643
No 168
>1uu1_A Histidinol-phosphate aminotransferase; histidine biosynthesis, pyridoxal phosphate, complete proteome; HET: PMP HSA; 2.38A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1uu0_A 1h1c_A* 1uu2_A* 2f8j_A*
Probab=40.98 E-value=66 Score=28.72 Aligned_cols=83 Identities=19% Similarity=0.202 Sum_probs=47.5
Q ss_pred HHHHHHHHHHHHHHHHHHHhhCCCeEEeecCCCCCCcceeeeccccCccccccccceeEEEEecCCCCCCCCCcchhhHH
Q psy2480 189 IQDILTFNFSLVESIRQKLSEYPCLRILSHGPVSGLGLKEVTSQYLPVQTILESVQSCVVFQFVPKDAGWGPVPAYYDKL 268 (337)
Q Consensus 189 i~~~I~~t~~La~~~~e~L~~~p~LeiL~~~~waglg~v~~~~~~~~~~~~~~~~lsvVvFRy~P~~~~~e~~~~y~D~L 268 (337)
+.++.++.-+.++.+.+.+++. ++++.. ...+.+.|++. . . |
T Consensus 251 ~~~~~~~~~~~~~~l~~~L~~~-g~~~~~------------------------~~~~~~~~~~~-~-~---------~-- 292 (335)
T 1uu1_A 251 FEERTKFIVEERERMKSALREM-GYRITD------------------------SRGNFVFVFME-K-E---------E-- 292 (335)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH-TCCBCC------------------------CCSSEEEEECC-T-H---------H--
T ss_pred HHHHHHHHHHHHHHHHHHHHHC-CcEEcC------------------------CCCeEEEEECC-C-C---------C--
Confidence 4455666667788888888876 555322 12234445542 1 1 1
Q ss_pred HHHHHHHHhhcCCCcceEEEEeeeCcEEEEEecCCCCChhHHHHHHHHHHH
Q psy2480 269 NSWLGQILQRDVPSVSLNLTETAAFGTVLRICPFECSSGGDYESFLVCLDA 319 (337)
Q Consensus 269 NswLgqiL~~~~~~~~~~v~et~~~G~~LRfcplnp~T~edI~~~v~~L~~ 319 (337)
...+.+.|.+. ++.+.. .+-++|+|+- +.+|++++++.|++
T Consensus 293 ~~~~~~~l~~~----gi~v~~---~~~~iRis~~---~~~~i~~~~~~l~~ 333 (335)
T 1uu1_A 293 KERLLEHLRTK----NVAVRS---FREGVRITIG---KREENDMILRELEV 333 (335)
T ss_dssp HHHHHHHHHHH----TEEEEE---ETTEEEEECC---CHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHC----CEEEEE---CCCeEEEEeC---CHHHHHHHHHHHHh
Confidence 11233444332 355555 2348999973 46789999988875
No 169
>3a8u_X Omega-amino acid--pyruvate aminotransferase; large pleated sheet, transaminase, pyridox phosphate; HET: PLP; 1.40A {Pseudomonas putida}
Probab=40.80 E-value=2.2e+02 Score=26.51 Aligned_cols=31 Identities=16% Similarity=0.172 Sum_probs=25.1
Q ss_pred cEEEEEecCCCCChhHHHHHHHHHHHHHhhh
Q psy2480 294 GTVLRICPFECSSGGDYESFLVCLDAQVYSG 324 (337)
Q Consensus 294 G~~LRfcplnp~T~edI~~~v~~L~~~~~il 324 (337)
|-++|++|--..|.+||+++++.|++.++.+
T Consensus 417 g~~iRis~~~~~t~~~i~~~l~~l~~~l~~~ 447 (449)
T 3a8u_X 417 GDTLQFGPTFNSKPQDLDRLFDAVGEVLNKL 447 (449)
T ss_dssp TTEEEECCCTTCCHHHHHHHHHHHHHHHHHC
T ss_pred CCEEEEECCCcCCHHHHHHHHHHHHHHHHHH
Confidence 3689999855558999999999999876643
No 170
>3cq5_A Histidinol-phosphate aminotransferase; PLP, PMP, amino-acid biosynthesis, histidine biosynthesis, pyridoxal phosphate; HET: PMP; 1.80A {Corynebacterium glutamicum} PDB: 3cq6_A* 3cq4_A
Probab=40.56 E-value=1.4e+02 Score=26.91 Aligned_cols=86 Identities=12% Similarity=0.042 Sum_probs=50.1
Q ss_pred HHHHHHHHHHHHHHHHHHHhhCCCeEEeecCCCCCCcceeeeccccCccccccccceeEEEEecCCCCCCCCCcchhhHH
Q psy2480 189 IQDILTFNFSLVESIRQKLSEYPCLRILSHGPVSGLGLKEVTSQYLPVQTILESVQSCVVFQFVPKDAGWGPVPAYYDKL 268 (337)
Q Consensus 189 i~~~I~~t~~La~~~~e~L~~~p~LeiL~~~~waglg~v~~~~~~~~~~~~~~~~lsvVvFRy~P~~~~~e~~~~y~D~L 268 (337)
+.++.++.-+.++.+.+.+++ +++++.. ...+.+.|++. .+ .++
T Consensus 280 ~~~~~~~~~~~~~~l~~~L~~-~g~~~~~------------------------~~~~~~~~~~~---~~-------~~~- 323 (369)
T 3cq5_A 280 TLGTVEKLSVERVRVAARLEE-LGYAVVP------------------------SESNFVFFGDF---SD-------QHA- 323 (369)
T ss_dssp HHTHHHHHHHHHHHHHHHHHH-HTCEEEC------------------------CSSSEEEEECC---SS-------HHH-
T ss_pred HHHHHHHHHHHHHHHHHHHHh-CCCEECC------------------------CCCeEEEEECC---CC-------HHH-
Confidence 445556666778888888877 4677653 22344556652 11 012
Q ss_pred HHHHHHHHhhcCCCcceEEEEeeeCcEEEEEecCCCCChhHHHHHHHHHHHHH
Q psy2480 269 NSWLGQILQRDVPSVSLNLTETAAFGTVLRICPFECSSGGDYESFLVCLDAQV 321 (337)
Q Consensus 269 NswLgqiL~~~~~~~~~~v~et~~~G~~LRfcplnp~T~edI~~~v~~L~~~~ 321 (337)
+.+.|.+. ++.+.... ...++|+|+- +.+|++++++.|++.+
T Consensus 324 ---l~~~l~~~----gi~v~~~~-~~~~iRis~~---~~~~i~~~~~~l~~~~ 365 (369)
T 3cq5_A 324 ---AWQAFLDR----GVLIRDVG-IAGHLRTTIG---VPEENDAFLDAAAEII 365 (369)
T ss_dssp ---HHHHHHHT----TEECBCCS-CTTEEEEECC---CHHHHHHHHHHHHHHH
T ss_pred ---HHHHHHHC----CEEEEECC-CCCeEEEEeC---CHHHHHHHHHHHHHHH
Confidence 22333221 23333221 1248999986 7899999999998764
No 171
>3hdo_A Histidinol-phosphate aminotransferase; PSI-II, histidinol-phosphate aminotrans structural genomics, protein structure initiative; 1.61A {Geobacter metallireducens gs-15}
Probab=39.88 E-value=71 Score=28.77 Aligned_cols=90 Identities=11% Similarity=-0.010 Sum_probs=53.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhCCCeEEeecCCCCCCcceeeeccccCccccccccceeEEEEecCCCCCCCCCcchhhH
Q psy2480 188 GIQDILTFNFSLVESIRQKLSEYPCLRILSHGPVSGLGLKEVTSQYLPVQTILESVQSCVVFQFVPKDAGWGPVPAYYDK 267 (337)
Q Consensus 188 ~i~~~I~~t~~La~~~~e~L~~~p~LeiL~~~~waglg~v~~~~~~~~~~~~~~~~lsvVvFRy~P~~~~~e~~~~y~D~ 267 (337)
.+.++.+..-+.++.+.+.+++. ++++.. ...+.+.|++. +.+ .++
T Consensus 262 ~~~~~~~~~~~~~~~l~~~L~~~-~~~~~~------------------------~~~~~~~~~~~--~~~-------~~~ 307 (360)
T 3hdo_A 262 YLSECCRRIRETREWFTTELRSI-GYDVIP------------------------SQGNYLFATPP--DRD-------GKR 307 (360)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHT-TCEECC------------------------CSSSEEEEECT--TCC-------HHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHC-CCEEcC------------------------CCccEEEEECC--CCC-------HHH
Confidence 34566677777888899988887 777653 22333445442 211 122
Q ss_pred HHHHHHHHHhhcCCCcceEEEEeee--CcEEEEEecCCCCChhHHHHHHHHHHHHHh
Q psy2480 268 LNSWLGQILQRDVPSVSLNLTETAA--FGTVLRICPFECSSGGDYESFLVCLDAQVY 322 (337)
Q Consensus 268 LNswLgqiL~~~~~~~~~~v~et~~--~G~~LRfcplnp~T~edI~~~v~~L~~~~~ 322 (337)
+.+.|.+. ++.+..... ..-++|+|+- +.+|++.+++.|++..+
T Consensus 308 ----l~~~l~~~----gi~v~~~~~~~~~~~iRis~~---~~~e~~~l~~al~~~~~ 353 (360)
T 3hdo_A 308 ----VYDGLYAR----KVLVRHFSDPLLAHGMRISIG---TREEMEQTLAALKEIGE 353 (360)
T ss_dssp ----HHHHHHHT----TEECBCCCSTTTTTSEEEECC---CHHHHHHHHHHHHHHHC
T ss_pred ----HHHHHHHC----CEEEEECCCCCCCCEEEEEcC---CHHHHHHHHHHHHHHhc
Confidence 22333322 233333222 2258999965 89999999999886543
No 172
>3lws_A Aromatic amino acid beta-eliminating lyase/threonine aldolase; structural genomics, joint center for structural genomics, JCSG; HET: LLP MSE; 2.00A {Exiguobacterium sibiricum}
Probab=39.80 E-value=1.3e+02 Score=26.80 Aligned_cols=95 Identities=11% Similarity=0.100 Sum_probs=54.8
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCCeEEeecCCCCCCcceeeeccccCccccccccceeEEEEecCCCCCCCCCcchhhHHH
Q psy2480 190 QDILTFNFSLVESIRQKLSEYPCLRILSHGPVSGLGLKEVTSQYLPVQTILESVQSCVVFQFVPKDAGWGPVPAYYDKLN 269 (337)
Q Consensus 190 ~~~I~~t~~La~~~~e~L~~~p~LeiL~~~~waglg~v~~~~~~~~~~~~~~~~lsvVvFRy~P~~~~~e~~~~y~D~LN 269 (337)
.+++++..+.++.+.+.|++.|++++... +...+.+.+++.... ....+++-
T Consensus 255 ~~~~~~~~~~~~~l~~~L~~~~g~~~~~~----------------------~~~~~~~~~~~~~~~------~~~~~~~~ 306 (357)
T 3lws_A 255 KDRMGQYYEQAKQLAEQFNALPGVHTTPE----------------------VPVSNMFHLHFDGQA------ADISPKLE 306 (357)
T ss_dssp TTCHHHHHHHHHHHHHHHHTSTTEEEESS----------------------SCSSSEEEEEEESCH------HHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCeeccC----------------------CCcceEEEEEecCCh------HHHHHHHH
Confidence 34555567778889999999999998531 244556666763211 00112222
Q ss_pred HHHHHHHhhcCCCcceEEEEee---eCcEEEEEecCCCC---ChhHHHHHHHHHHHH
Q psy2480 270 SWLGQILQRDVPSVSLNLTETA---AFGTVLRICPFECS---SGGDYESFLVCLDAQ 320 (337)
Q Consensus 270 swLgqiL~~~~~~~~~~v~et~---~~G~~LRfcplnp~---T~edI~~~v~~L~~~ 320 (337)
+.|.+. ++.+.... .+..++|++.-... +.+++++.++.|.+.
T Consensus 307 ----~~l~~~----Gi~v~~g~~~~~~~~~~r~~i~~~~~~~~~~~l~~al~~l~~a 355 (357)
T 3lws_A 307 ----QVQEET----GLGFVGYLVDKDGYCSTEISVGDAYGELDQQTRDAGFARLRQA 355 (357)
T ss_dssp ----HHHHHH----CEESCSCCEECSSEEEEEEEBCTTGGGSCHHHHHHHHHHHHHH
T ss_pred ----HHHHhc----CeEEecccccCCCceEEEEEecchhhhcCHHHHHHHHHHHHHh
Confidence 333222 12222211 23368999876653 678888888887764
No 173
>1cs1_A CGS, protein (cystathionine gamma-synthase); lyase, LLP-dependent enzymes, methionine biosynthesis; HET: LLP DHD; 1.50A {Escherichia coli} SCOP: c.67.1.3
Probab=37.06 E-value=87 Score=28.68 Aligned_cols=26 Identities=19% Similarity=0.018 Sum_probs=20.7
Q ss_pred EEEEEecCCCCChhHHHHHHHHHHHH
Q psy2480 295 TVLRICPFECSSGGDYESFLVCLDAQ 320 (337)
Q Consensus 295 ~~LRfcplnp~T~edI~~~v~~L~~~ 320 (337)
-++|+++-...+.++|+.+.+.|++.
T Consensus 358 ~~iRis~~~~~~~~~i~~l~~al~~~ 383 (386)
T 1cs1_A 358 TLLRISTGIEDGEDLIADLENGFRAA 383 (386)
T ss_dssp TEEEEECCSSCHHHHHHHHHHHHHHH
T ss_pred CeEEEEEccCCHHHHHHHHHHHHHHh
Confidence 58999988755788888888887764
No 174
>2x3l_A ORN/Lys/Arg decarboxylase family protein; lyase; HET: LLP; 2.00A {Staphylococcus aureus}
Probab=36.00 E-value=1.2e+02 Score=28.82 Aligned_cols=29 Identities=10% Similarity=-0.247 Sum_probs=23.9
Q ss_pred EEEEEecCCCCChhHHHHHHHHHHHHHhhh
Q psy2480 295 TVLRICPFECSSGGDYESFLVCLDAQVYSG 324 (337)
Q Consensus 295 ~~LRfcplnp~T~edI~~~v~~L~~~~~il 324 (337)
.++||++-...|.+|+ ++++.|++..+.+
T Consensus 325 ~~iRi~~~~~~t~e~i-~l~~aL~~~~~~~ 353 (446)
T 2x3l_A 325 YQALAILPLWHHDDTY-LFDSLLRKIEDMI 353 (446)
T ss_dssp SCEEEECCCCCTTCCC-CHHHHHHHHHTCC
T ss_pred CEEEEEeecCCCHHHH-HHHHHHHHHHHhh
Confidence 5899998655688999 9999999887655
No 175
>2ord_A Acoat, acetylornithine aminotransferase; TM1785, acetylornithine aminotransferase (EC 2.6.1.11) (ACOA structural genomics; HET: MSE PLP; 1.40A {Thermotoga maritima MSB8} PDB: 2e54_A*
Probab=35.73 E-value=2.5e+02 Score=25.42 Aligned_cols=29 Identities=14% Similarity=0.147 Sum_probs=23.4
Q ss_pred cEEEEEecCCCCChhHHHHHHHHHHHHHh
Q psy2480 294 GTVLRICPFECSSGGDYESFLVCLDAQVY 322 (337)
Q Consensus 294 G~~LRfcplnp~T~edI~~~v~~L~~~~~ 322 (337)
..++|+||--..+.+|++++++.|++.+.
T Consensus 367 ~~~iRis~~~~~~~e~i~~~~~~l~~~l~ 395 (397)
T 2ord_A 367 NNTIRFLPPLTVEYGEIDLAVETLKKVLQ 395 (397)
T ss_dssp TTEEEECCCTTCCHHHHHHHHHHHHHHHH
T ss_pred CCEEEEECCcCCCHHHHHHHHHHHHHHHh
Confidence 45899997444589999999999988654
No 176
>3frk_A QDTB; aminotransferase, sugar-modification, natural porduct; HET: TQP; 2.15A {Thermoanaerobacteriumthermosaccharolyticum}
Probab=35.65 E-value=55 Score=29.71 Aligned_cols=41 Identities=2% Similarity=-0.132 Sum_probs=27.7
Q ss_pred chhhHHHHhhChhhHHHHHHHHHHHHHHHHHHHhhCCCeEEe
Q psy2480 175 LPVWTTLKSMGQTGIQDILTFNFSLVESIRQKLSEYPCLRIL 216 (337)
Q Consensus 175 L~lW~~Lq~LG~d~i~~~I~~t~~La~~~~e~L~~~p~LeiL 216 (337)
..+..++.....+.+-++.++.-++++.+.+.+++.+ +++.
T Consensus 232 ~~~~aa~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~ 272 (373)
T 3frk_A 232 DELQAGFLRVKLKYLDKWNEERRKIAQKYIAGINNPN-VIIP 272 (373)
T ss_dssp CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHCCCTT-EECC
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCc-eEec
Confidence 3444444333345666777888889999999998887 6653
No 177
>3p1t_A Putative histidinol-phosphate aminotransferase; PLP-dependent transferase-like, structural genomics, joint C structural genomics, JCSG; HET: TLA; 2.60A {Burkholderia pseudomallei}
Probab=35.61 E-value=1.6e+02 Score=25.81 Aligned_cols=87 Identities=15% Similarity=0.225 Sum_probs=52.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhCCCeEEeecCCCCCCcceeeeccccCccccccccceeEEEEecCCCCCCCCCcchhhH
Q psy2480 188 GIQDILTFNFSLVESIRQKLSEYPCLRILSHGPVSGLGLKEVTSQYLPVQTILESVQSCVVFQFVPKDAGWGPVPAYYDK 267 (337)
Q Consensus 188 ~i~~~I~~t~~La~~~~e~L~~~p~LeiL~~~~waglg~v~~~~~~~~~~~~~~~~lsvVvFRy~P~~~~~e~~~~y~D~ 267 (337)
.+.+.+++..+.++.+.+.+++. ++++.. ...+.+.|+.. ++ +.
T Consensus 246 ~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~------------------------~~~~~~~~~~~-~~----------~~ 289 (337)
T 3p1t_A 246 AREAHIAKTLAQRRRVADALRGL-GYRVAS------------------------SEANFVLVENA-AG----------ER 289 (337)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHT-TCCBCC------------------------CSSSEEEEECT-TT----------HH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHC-cCEECC------------------------CCCeEEEEEcC-CH----------HH
Confidence 35566777777888888888887 565543 22334445441 11 11
Q ss_pred HHHHHHHHHhhcCCCcceEEEEeeeCc--EEEEEecCCCCChhHHHHHHHHHHHHH
Q psy2480 268 LNSWLGQILQRDVPSVSLNLTETAAFG--TVLRICPFECSSGGDYESFLVCLDAQV 321 (337)
Q Consensus 268 LNswLgqiL~~~~~~~~~~v~et~~~G--~~LRfcplnp~T~edI~~~v~~L~~~~ 321 (337)
+.+.|.+. ++.+......| -++|+|+- +.+|++.+++.|++..
T Consensus 290 ----~~~~l~~~----gi~v~~g~~~~~~~~iRis~~---~~~~~~~l~~al~~~~ 334 (337)
T 3p1t_A 290 ----TLRFLRER----GIQVKDAGQFGLHHHIRISIG---REEDNDRLLAALAEYS 334 (337)
T ss_dssp ----HHHHHHHT----TEECEEGGGGTCCSEEEEECC---CHHHHHHHHHHHHHHT
T ss_pred ----HHHHHHHC----CeEEEECccCCCCCeEEEecC---CHHHHHHHHHHHHHHh
Confidence 22333322 35555544322 49999965 7899999999998754
No 178
>2cjg_A L-lysine-epsilon aminotransferase; internal aldimine, pyridoxal phosphate, PLP, RV3290C, lysine amino transferase; HET: PMP; 1.95A {Mycobacterium tuberculosis} PDB: 2cjd_A* 2cin_A* 2cjh_A* 2jjg_A* 2jje_A* 2jjh_A* 2jjf_A
Probab=35.61 E-value=61 Score=30.82 Aligned_cols=31 Identities=10% Similarity=0.116 Sum_probs=25.3
Q ss_pred cEEEEEecCCCCChhHHHHHHHHHHHHHhhh
Q psy2480 294 GTVLRICPFECSSGGDYESFLVCLDAQVYSG 324 (337)
Q Consensus 294 G~~LRfcplnp~T~edI~~~v~~L~~~~~il 324 (337)
.-++||+|--..|.+||+++++.|++.+..+
T Consensus 418 ~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~~ 448 (449)
T 2cjg_A 418 ADTVRFRPPLTVSTAEIDAAIAAVRSALPVV 448 (449)
T ss_dssp TTEEEECCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCCCHHHHHHHHHHHHHHHHHh
Confidence 3689999755568999999999999876543
No 179
>1b9h_A AHBA synthase, protein (3-amino-5-hydroxybenzoic acid synthase); rifamycin biosynthesis (RIFD gene); HET: PLP; 2.00A {Amycolatopsis mediterranei} SCOP: c.67.1.4 PDB: 1b9i_A*
Probab=34.86 E-value=1.6e+02 Score=26.54 Aligned_cols=31 Identities=3% Similarity=-0.045 Sum_probs=24.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhCCCeEEee
Q psy2480 187 TGIQDILTFNFSLVESIRQKLSEYPCLRILS 217 (337)
Q Consensus 187 d~i~~~I~~t~~La~~~~e~L~~~p~LeiL~ 217 (337)
+.+.+++++--+.++.+.+.|++.|++++..
T Consensus 250 ~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~ 280 (388)
T 1b9h_A 250 ARLDEQIAVRDERWTLLSRLLGAIDGVVPQG 280 (388)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHTSTTCEECC
T ss_pred HHHHHHHHHHHHHHHHHHHHhccCCCccccC
Confidence 3455667777778999999999999988775
No 180
>3bb8_A CDP-4-keto-6-deoxy-D-glucose-3-dehydrase; aspartate aminotransferase fold, oxidoreductase; HET: PLP; 2.35A {Yersinia pseudotuberculosis} PDB: 3bcx_A
Probab=34.71 E-value=1.5e+02 Score=27.74 Aligned_cols=30 Identities=10% Similarity=0.109 Sum_probs=23.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhCCCeEEee
Q psy2480 188 GIQDILTFNFSLVESIRQKLSEYPCLRILS 217 (337)
Q Consensus 188 ~i~~~I~~t~~La~~~~e~L~~~p~LeiL~ 217 (337)
.+.+.+++..++++++.+.|++.+++.++.
T Consensus 305 ~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~ 334 (437)
T 3bb8_A 305 RIEEFVEKRKANFKYLKDALQSCADFIELP 334 (437)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGGTTTEECC
T ss_pred HHHHHHHHHHHHHHHHHHHhhccCCccccC
Confidence 345667777888999999999988876653
No 181
>2eh6_A Acoat, acetylornithine aminotransferase; ARGD, structural genomics, NPPSFA, national project on prote structural and functional analyses; HET: PLP; 1.90A {Aquifex aeolicus}
Probab=32.56 E-value=2.7e+02 Score=24.80 Aligned_cols=85 Identities=14% Similarity=0.091 Sum_probs=50.6
Q ss_pred HHHHHHHHHHHHHHHHHhhCCCeEEeecCCCCCCcceeeeccccCccccccccceeEEEEecCCCCCCCCCcchhhHHHH
Q psy2480 191 DILTFNFSLVESIRQKLSEYPCLRILSHGPVSGLGLKEVTSQYLPVQTILESVQSCVVFQFVPKDAGWGPVPAYYDKLNS 270 (337)
Q Consensus 191 ~~I~~t~~La~~~~e~L~~~p~LeiL~~~~waglg~v~~~~~~~~~~~~~~~~lsvVvFRy~P~~~~~e~~~~y~D~LNs 270 (337)
++.++.-+.++.+.+.+++.+. ..+. ..-..+.|++. .+ . ++
T Consensus 290 ~~~~~~~~~~~~l~~~L~~~~~-~~~~------------------------~~g~~~~~~~~-~~-~--------~~--- 331 (375)
T 2eh6_A 290 KLLPHVREVGNYFKEKLKELGK-GKVK------------------------GRGLMLGLELE-RE-C--------KD--- 331 (375)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTS-SEEE------------------------EETTEEEEECS-SC-C--------HH---
T ss_pred HHHHHHHHHHHHHHHHHHHHhc-CCce------------------------EEEEEEEEEEc-Cc-H--------HH---
Confidence 5666777788888888887764 1121 22344556652 11 1 22
Q ss_pred HHHHHHhhcCCCcceEEEEeeeCcEEEEEecCCCCChhHHHHHHHHHHHH
Q psy2480 271 WLGQILQRDVPSVSLNLTETAAFGTVLRICPFECSSGGDYESFLVCLDAQ 320 (337)
Q Consensus 271 wLgqiL~~~~~~~~~~v~et~~~G~~LRfcplnp~T~edI~~~v~~L~~~ 320 (337)
+.+.|.+. ++.+... ++.++|+++--..+.+|++++++.|++.
T Consensus 332 -~~~~l~~~----gi~~~~~--~~~~iRi~~~~~~~~~~i~~~~~~l~~~ 374 (375)
T 2eh6_A 332 -YVLKALEK----GLLINCT--AGKVLRFLPPLIIQKEHIDRAISVLREI 374 (375)
T ss_dssp -HHHHHHHT----TEECEEE--TTTEEEECCCTTCCHHHHHHHHHHHHHH
T ss_pred -HHHHHHHC----CCEEecC--CCCEEEEECCCCCCHHHHHHHHHHHHHh
Confidence 22333321 2444332 3458999985555899999999999764
No 182
>3g7q_A Valine-pyruvate aminotransferase; NP_462565.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Salmonella typhimurium}
Probab=31.65 E-value=2.9e+02 Score=24.97 Aligned_cols=29 Identities=10% Similarity=0.054 Sum_probs=24.5
Q ss_pred EEEEEecCCCCChhHHHHHHHHHHHHHhhhh
Q psy2480 295 TVLRICPFECSSGGDYESFLVCLDAQVYSGS 325 (337)
Q Consensus 295 ~~LRfcplnp~T~edI~~~v~~L~~~~~il~ 325 (337)
.++|+|+-. +.++|++.++.|.+.+..+.
T Consensus 386 ~~iRis~~~--~~~~i~~~~~~l~~~l~~~~ 414 (417)
T 3g7q_A 386 QCMRMNYVP--EPDKIEAGVKILAEEIERAW 414 (417)
T ss_dssp GEEEEESCS--CHHHHHHHHHHHHHHHHHHH
T ss_pred CeEEEEecC--CHHHHHHHHHHHHHHHHHHH
Confidence 499999964 89999999999998876553
No 183
>3ez1_A Aminotransferase MOCR family; YP_604413.1, struct genomics, joint center for structural genomics, JCSG; 2.60A {Deinococcus geothermalis dsm 11300}
Probab=30.41 E-value=2.3e+02 Score=25.96 Aligned_cols=31 Identities=13% Similarity=0.155 Sum_probs=25.4
Q ss_pred cEEEEEecCCCCChhHHHHHHHHHHHHHhhhh
Q psy2480 294 GTVLRICPFECSSGGDYESFLVCLDAQVYSGS 325 (337)
Q Consensus 294 G~~LRfcplnp~T~edI~~~v~~L~~~~~il~ 325 (337)
.-++|+|+-.. +.++|++.++.|++.+..+.
T Consensus 386 ~~~iRis~~~~-~~~~i~~~~~~l~~~l~~~~ 416 (423)
T 3ez1_A 386 NRNLRLAPTRP-PVEEVRTAMQVVAACIRLAT 416 (423)
T ss_dssp SCEEEECCSSS-CHHHHHHHHHHHHHHHHHHH
T ss_pred CCeEEEEcCCC-CHHHHHHHHHHHHHHHHHHH
Confidence 36999999555 99999999999998876553
No 184
>1vef_A Acetylornithine/acetyl-lysine aminotransferase; PLP, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: PLP; 1.35A {Thermus thermophilus} SCOP: c.67.1.4 PDB: 1wkg_A* 1wkh_A*
Probab=29.94 E-value=2.4e+02 Score=25.46 Aligned_cols=28 Identities=25% Similarity=0.259 Sum_probs=22.5
Q ss_pred cEEEEEecCCCCChhHHHHHHHHHHHHH
Q psy2480 294 GTVLRICPFECSSGGDYESFLVCLDAQV 321 (337)
Q Consensus 294 G~~LRfcplnp~T~edI~~~v~~L~~~~ 321 (337)
+.++|+|+--..+.+|++++++.|++.+
T Consensus 367 ~~~iRi~~~~~~~~~~i~~~~~~l~~~l 394 (395)
T 1vef_A 367 PTVIRFLPPLVIEKEDLERVVEAVRAVL 394 (395)
T ss_dssp TTEEEECCCTTCCHHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCCCCHHHHHHHHHHHHHHh
Confidence 4689999754458999999999998753
No 185
>4atq_A 4-aminobutyrate transaminase; transferase; HET: PLP; 2.75A {Arthrobacter aurescens} PDB: 4atp_A*
Probab=29.68 E-value=45 Score=32.76 Aligned_cols=39 Identities=21% Similarity=0.208 Sum_probs=30.1
Q ss_pred ceEEEEeeeCcEEEEEecCCCCChhHHHHHHHHHHHHHh
Q psy2480 284 SLNLTETAAFGTVLRICPFECSSGGDYESFLVCLDAQVY 322 (337)
Q Consensus 284 ~~~v~et~~~G~~LRfcplnp~T~edI~~~v~~L~~~~~ 322 (337)
++.+.....+|-+|||+|=-..|.++|+++++.|++.++
T Consensus 415 Gvl~~~~g~~~~~irl~PpL~it~~~id~~l~~l~~al~ 453 (456)
T 4atq_A 415 GVIILTCGTYGNVIRLLPPLVISDELLIDGLEVLAAAIK 453 (456)
T ss_dssp TEECEEECTTSCEEEECCCTTCCHHHHHHHHHHHHHHHH
T ss_pred CCEEEecCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHH
Confidence 355555555778999998655689999999999988765
No 186
>4ao9_A Beta-phenylalanine aminotransferase; HET: PLP; 1.50A {Variovorax paradoxus} PDB: 4aoa_A*
Probab=29.42 E-value=1.9e+02 Score=28.29 Aligned_cols=28 Identities=7% Similarity=0.030 Sum_probs=22.1
Q ss_pred cCCCCChhHHHHHHHHHHHHHhhhhccc
Q psy2480 301 PFECSSGGDYESFLVCLDAQVYSGSQGL 328 (337)
Q Consensus 301 plnp~T~edI~~~v~~L~~~~~il~~t~ 328 (337)
+..+-|.+||+++++.|++.+..+.+.+
T Consensus 423 ~s~~~T~~dId~~l~al~~~l~~~~a~l 450 (454)
T 4ao9_A 423 LSLPLTDADIDRYVAAIGSFIGGHGALL 450 (454)
T ss_dssp CCTTCCHHHHHHHHHHHHHHHHHSGGGS
T ss_pred EeCCCCHHHHHHHHHHHHHHHHhccccC
Confidence 3333489999999999999998876654
No 187
>3ele_A Amino transferase; RER070207001803, structural genomics, JOI for structural genomics, JCSG; HET: MSE PLP; 2.10A {Eubacterium rectale}
Probab=28.37 E-value=1.5e+02 Score=26.93 Aligned_cols=40 Identities=8% Similarity=0.012 Sum_probs=29.4
Q ss_pred ceEEEEeeeC--cEEEEEecCCCCChhHHHHHHHHHHHHHhhhh
Q psy2480 284 SLNLTETAAF--GTVLRICPFECSSGGDYESFLVCLDAQVYSGS 325 (337)
Q Consensus 284 ~~~v~et~~~--G~~LRfcplnp~T~edI~~~v~~L~~~~~il~ 325 (337)
++.+...... .-++|+|+- .+.++|+++++.|++.++.+.
T Consensus 356 gi~v~~g~~~~~~~~iRis~~--~~~e~i~~~l~~l~~~l~~~~ 397 (398)
T 3ele_A 356 DVLIVAADGFGCPGWVRISYC--VDREMIKHSMPAFEKIYKKYN 397 (398)
T ss_dssp TEECEESGGGTCTTEEEEECC--SCHHHHHHHHHHHHHHHHHHC
T ss_pred CEEEeCccccCCCCeEEEEec--CCHHHHHHHHHHHHHHHHHhh
Confidence 3666655432 249999984 489999999999998877653
No 188
>3jtx_A Aminotransferase; NP_283882.1, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; HET: LLP MES; 1.91A {Neisseria meningitidis Z2491}
Probab=28.22 E-value=2.6e+02 Score=25.09 Aligned_cols=25 Identities=8% Similarity=-0.104 Sum_probs=20.9
Q ss_pred cEEEEEecCCCCChhHHHHHHHHHHHH
Q psy2480 294 GTVLRICPFECSSGGDYESFLVCLDAQ 320 (337)
Q Consensus 294 G~~LRfcplnp~T~edI~~~v~~L~~~ 320 (337)
..++|+|+-. +.++|++.++.|++.
T Consensus 370 ~~~iRis~~~--~~~~i~~~l~~l~~~ 394 (396)
T 3jtx_A 370 EGYVRIALVA--DVATCVKAAEDIVSL 394 (396)
T ss_dssp TTEEEEECCS--CHHHHHHHHHHHHHH
T ss_pred CCeEEEEEcC--CHHHHHHHHHHHHHH
Confidence 3599999765 899999999998864
No 189
>2llz_A Uncharacterized protein YJDK; RNAse, biofilm, unknown function; NMR {Escherichia coli}
Probab=27.20 E-value=47 Score=26.77 Aligned_cols=65 Identities=9% Similarity=0.057 Sum_probs=40.9
Q ss_pred ccceeEEEEecCCCCCCCCCcchhhHHHHHHHHHHhhcCCCcceEEEEeeeCcE-----EEEEecCCCCChhHHHHHHHH
Q psy2480 242 SVQSCVVFQFVPKDAGWGPVPAYYDKLNSWLGQILQRDVPSVSLNLTETAAFGT-----VLRICPFECSSGGDYESFLVC 316 (337)
Q Consensus 242 ~~lsvVvFRy~P~~~~~e~~~~y~D~LNswLgqiL~~~~~~~~~~v~et~~~G~-----~LRfcplnp~T~edI~~~v~~ 316 (337)
-..=||.|+|-+++ .....+||+ .+.+.+- ..+=++.+|. .-.|..+.+-..+||+.+++.
T Consensus 9 ~~~YVVTf~y~e~~------Lt~~~eL~~----~lt~aGF----~ttl~D~~G~pHeLgtNsFgliS~l~~~ev~~La~~ 74 (100)
T 2llz_A 9 FNTYVVSFDYPSSY------SSVFLRLRS----LMYDMNF----SSIVADEYGIPRQLNENSFAITTSLAASEIEDLIRL 74 (100)
T ss_dssp CCCEEEEEECCGGG------HHHHHHHHH----HHHHTTE----ESEEECSSSCEEECTTTEEEECCCSCHHHHHHHHHH
T ss_pred ceEEEEEEEecccc------hHHHHHHHH----HHHhCCc----eeEeecCCCCceeccccceeeeccCCHHHHHHHHHH
Confidence 34568999996444 334556664 5655554 2333334553 346777777789999999887
Q ss_pred HHHH
Q psy2480 317 LDAQ 320 (337)
Q Consensus 317 L~~~ 320 (337)
|-+.
T Consensus 75 L~e~ 78 (100)
T 2llz_A 75 KCLD 78 (100)
T ss_dssp GGGT
T ss_pred HHHh
Confidence 7553
No 190
>2r2n_A Kynurenine/alpha-aminoadipate aminotransferase mitochondrial; alpha & beta protein, PLP-dependent transferase, aminotransf mitochondrion; HET: PMP KYN; 1.95A {Homo sapiens} PDB: 2qlr_A* 3dc1_A* 3ue8_A* 2vgz_A* 2xh1_A*
Probab=26.19 E-value=3.9e+02 Score=24.62 Aligned_cols=28 Identities=14% Similarity=0.064 Sum_probs=23.0
Q ss_pred EEEEEecCCCCChhHHHHHHHHHHHHHhh
Q psy2480 295 TVLRICPFECSSGGDYESFLVCLDAQVYS 323 (337)
Q Consensus 295 ~~LRfcplnp~T~edI~~~v~~L~~~~~i 323 (337)
.++|+|+-. .+.++|+++++.|++.+..
T Consensus 396 ~~iRis~~~-~~~~~i~~~~~~l~~~l~~ 423 (425)
T 2r2n_A 396 PYLRASFSS-ASPEQMDVAFQVLAQLIKE 423 (425)
T ss_dssp CEEEEECSS-CCHHHHHHHHHHHHHHHHH
T ss_pred CEEEEEeCC-CCHHHHHHHHHHHHHHHHH
Confidence 589999763 4899999999999887653
No 191
>3tcm_A Alanine aminotransferase 2; pyridoxal phosphate (PLP)-binding; HET: DCS; 2.71A {Hordeum vulgare}
Probab=25.73 E-value=1.4e+02 Score=28.92 Aligned_cols=29 Identities=3% Similarity=-0.131 Sum_probs=23.6
Q ss_pred EEEEEecCCCCChhHHHHHHHHHHHHHhhhh
Q psy2480 295 TVLRICPFECSSGGDYESFLVCLDAQVYSGS 325 (337)
Q Consensus 295 ~~LRfcplnp~T~edI~~~v~~L~~~~~il~ 325 (337)
.++|+|+. .+.++|+++++.|.+..+.+.
T Consensus 467 ~~iRis~~--~~~e~i~~~i~~l~~~~~~~~ 495 (500)
T 3tcm_A 467 WHFRCTIL--PQEDKIPAVISRFTVFHEAFM 495 (500)
T ss_dssp CBEEEESC--SCTTTHHHHHHHHHHHHHHHH
T ss_pred CEEEEEEC--CCHHHHHHHHHHHHHHHHHHH
Confidence 48999998 678889999999988776554
No 192
>3e2y_A Kynurenine-oxoglutarate transaminase 3; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: GLN PMP; 2.26A {Mus musculus} SCOP: c.67.1.0 PDB: 2zjg_A* 3e2f_A* 3e2z_A*
Probab=25.65 E-value=2.8e+02 Score=25.02 Aligned_cols=23 Identities=13% Similarity=0.287 Sum_probs=19.4
Q ss_pred EEEEEecCCCCChhHHHHHHHHHHH
Q psy2480 295 TVLRICPFECSSGGDYESFLVCLDA 319 (337)
Q Consensus 295 ~~LRfcplnp~T~edI~~~v~~L~~ 319 (337)
-++|+|.-. +.++|++.++.|++
T Consensus 386 ~~iRis~~~--~~e~l~~~l~~l~~ 408 (410)
T 3e2y_A 386 KLVRFCFIK--KDSTLDAAEEIFRA 408 (410)
T ss_dssp TEEEEECCC--CHHHHHHHHHHHHT
T ss_pred CEEEEEEcC--CHHHHHHHHHHHHh
Confidence 589999544 99999999999875
No 193
>3acz_A Methionine gamma-lyase; L-methionine; HET: LLP; 1.97A {Entamoeba histolytica} PDB: 3aej_A* 3ael_A* 3aem_A* 3aen_A* 3aeo_A* 3aep_A*
Probab=25.29 E-value=2.7e+02 Score=25.62 Aligned_cols=39 Identities=5% Similarity=0.035 Sum_probs=27.2
Q ss_pred hhHHHHhhChhhHHHHHHHHHHHHHHHHHHHhhCCCeEEee
Q psy2480 177 VWTTLKSMGQTGIQDILTFNFSLVESIRQKLSEYPCLRILS 217 (337)
Q Consensus 177 lW~~Lq~LG~d~i~~~I~~t~~La~~~~e~L~~~p~LeiL~ 217 (337)
-|..++.+ +.+..+++...+.++.+.+.+++.+.++-+-
T Consensus 245 ~~~~~~~l--~~l~~r~~~~~~~~~~l~~~l~~~~~v~~~~ 283 (389)
T 3acz_A 245 AFLCARGM--KTLPIRMQIHMENGLKVAKFLEQHEKIVKVN 283 (389)
T ss_dssp HHHHHHHH--TTHHHHHHHHHHHHHHHHHHHHHCTTEEEEE
T ss_pred HHHHHcCc--cHHHHHHHHHHHHHHHHHHHHHcCCCeeEEE
Confidence 34444443 3455677788888899999999998877664
No 194
>1b5p_A Protein (aspartate aminotransferase); pyridoxal enzyme; HET: PLP; 1.80A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1gck_A* 1b5o_A* 5bj4_A* 1gc4_A* 1gc3_A* 1bkg_A* 5bj3_A* 1bjw_A*
Probab=25.13 E-value=2.6e+02 Score=25.29 Aligned_cols=34 Identities=12% Similarity=0.068 Sum_probs=22.0
Q ss_pred eEEEEeeeC--cEEEEEecCCCCChhHHHHHHHHHHHH
Q psy2480 285 LNLTETAAF--GTVLRICPFECSSGGDYESFLVCLDAQ 320 (337)
Q Consensus 285 ~~v~et~~~--G~~LRfcplnp~T~edI~~~v~~L~~~ 320 (337)
+.+...... .-++|+|.- .+.++|++.++.|++.
T Consensus 346 v~v~~g~~f~~~~~iRis~~--~~~~~i~~~l~~l~~~ 381 (385)
T 1b5p_A 346 VAVVPGTDFAAFGHVRLSYA--TSEENLRKALERFARV 381 (385)
T ss_dssp EECEESGGGTCTTEEEEECC--SCHHHHHHHHHHGGGG
T ss_pred eEEecccccCCCCeEEEEec--CCHHHHHHHHHHHHHH
Confidence 545544332 248999975 4677888888777654
No 195
>1o69_A Aminotransferase; structural genomics, unknown function; HET: X04; 1.84A {Campylobacter jejuni} SCOP: c.67.1.4 PDB: 1o62_A 1o61_A*
Probab=24.48 E-value=1.6e+02 Score=27.00 Aligned_cols=29 Identities=17% Similarity=0.233 Sum_probs=21.8
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhCCCeEEee
Q psy2480 187 TGIQDILTFNFSLVESIRQKLSEYPCLRILS 217 (337)
Q Consensus 187 d~i~~~I~~t~~La~~~~e~L~~~p~LeiL~ 217 (337)
+.+.+++++..++++.+.+.|++. +++..
T Consensus 243 ~~l~~~~~~~~~~~~~l~~~L~~~--~~~~~ 271 (394)
T 1o69_A 243 EVLEQRVLKKREIYEWYKEFLGEY--FSFLD 271 (394)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHTTT--EECCC
T ss_pred HHHHHHHHHHHHHHHHHHHHhccc--ccccC
Confidence 345667888888999999999877 55543
No 196
>2po3_A 4-dehydrase; external aldimine, PLP, aminotransferase, TDP-sugar; HET: T4K; 2.10A {Streptomyces venezuelae}
Probab=24.35 E-value=4.2e+02 Score=24.34 Aligned_cols=31 Identities=13% Similarity=0.269 Sum_probs=24.3
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhCCCeEEee
Q psy2480 187 TGIQDILTFNFSLVESIRQKLSEYPCLRILS 217 (337)
Q Consensus 187 d~i~~~I~~t~~La~~~~e~L~~~p~LeiL~ 217 (337)
+.+.++.++..++++.+.+.+++.|++++..
T Consensus 257 ~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~ 287 (424)
T 2po3_A 257 DAFPEVIDRNRRNHAAYREHLADLPGVLVAD 287 (424)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCSCTTEEECC
T ss_pred HHHHHHHHHHHHHHHHHHHHhccCCCccccC
Confidence 4455677777788888999999888888875
No 197
>3e77_A Phosphoserine aminotransferase; SERC, PLP, structural genomi structural genomics consortium, SGC, amino-acid biosynthesi aminotransferase; HET: PLP; 2.50A {Homo sapiens}
Probab=24.30 E-value=1.1e+02 Score=29.14 Aligned_cols=40 Identities=5% Similarity=0.061 Sum_probs=32.0
Q ss_pred hHHHHHhcCch-hHHHHHHHHHHHHHHHHHhhccCCceEEe
Q psy2480 39 VWTTLKSMGQT-GIQDILTFNFSLVESVRQKLSEYPCLRIL 78 (337)
Q Consensus 39 lW~alQ~Lg~~-~I~~ri~~Af~ls~~l~~~L~~~~~I~il 78 (337)
+=.+++++-.. |+-.+.++--.+++.+++.|++++++++.
T Consensus 258 l~~al~~l~~~GG~~~i~~~~~~l~~~l~~~L~~~~g~~~~ 298 (377)
T 3e77_A 258 MGLVLEWIKNNGGAAAMEKLSSIKSQTIYEIIDNSQGFYVC 298 (377)
T ss_dssp HHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTSTTSEEC
T ss_pred HHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhcCCceec
Confidence 33556666566 67777788889999999999999999875
No 198
>3ffr_A Phosphoserine aminotransferase SERC; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP MSE P33; 1.75A {Cytophaga hutchinsonii atcc 33406}
Probab=24.16 E-value=61 Score=28.73 Aligned_cols=42 Identities=7% Similarity=-0.095 Sum_probs=34.7
Q ss_pred hhHHHHHhcCchhHHHHHHHHHHHHHHHHHhhccCCceEEee
Q psy2480 38 PVWTTLKSMGQTGIQDILTFNFSLVESVRQKLSEYPCLRILS 79 (337)
Q Consensus 38 plW~alQ~Lg~~~I~~ri~~Af~ls~~l~~~L~~~~~I~ils 79 (337)
-++.+++.+...++.+++++.....+.+.+.|++++++++..
T Consensus 251 ~~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~ 292 (362)
T 3ffr_A 251 LLGKVTGDMLQISADGIRKQTEEKAALINTYIESSKVFSFGV 292 (362)
T ss_dssp HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCSSEEESS
T ss_pred HHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHccCceecc
Confidence 356667766666788888888899999999999999999983
No 199
>3b46_A Aminotransferase BNA3; kynurenine aminotransferase, LLP, PLP, cytoplasm, mitochondrion, pyridoxal phosphate; HET: LLP; 2.00A {Saccharomyces cerevisiae}
Probab=24.06 E-value=1.9e+02 Score=27.16 Aligned_cols=24 Identities=17% Similarity=0.166 Sum_probs=20.2
Q ss_pred cEEEEEecCCCCChhHHHHHHHHHHH
Q psy2480 294 GTVLRICPFECSSGGDYESFLVCLDA 319 (337)
Q Consensus 294 G~~LRfcplnp~T~edI~~~v~~L~~ 319 (337)
+.++|+|+-. +.++|++.++.|++
T Consensus 419 ~~~iRls~~~--~~e~l~~~~~~l~~ 442 (447)
T 3b46_A 419 ENLLRFAVCK--DDAYLENAVERLKL 442 (447)
T ss_dssp TTEEEEECCS--CHHHHHHHHHHGGG
T ss_pred CCEEEEEEeC--CHHHHHHHHHHHHH
Confidence 4589999975 78999999998876
No 200
>1ohv_A 4-aminobutyrate aminotransferase; PLP-dependent enzyme, 4- AMIN acid, antiepileptic drug target; HET: PLP; 2.3A {Sus scrofa} SCOP: c.67.1.4 PDB: 1ohw_A* 1ohy_A*
Probab=22.73 E-value=66 Score=31.02 Aligned_cols=31 Identities=13% Similarity=0.037 Sum_probs=26.5
Q ss_pred cEEEEEecCCCCChhHHHHHHHHHHHHHhhh
Q psy2480 294 GTVLRICPFECSSGGDYESFLVCLDAQVYSG 324 (337)
Q Consensus 294 G~~LRfcplnp~T~edI~~~v~~L~~~~~il 324 (337)
.-+|||+|--..|.+||+++++.|++.+..+
T Consensus 441 ~~~iRi~~~~~~t~e~i~~~~~~l~~~l~~~ 471 (472)
T 1ohv_A 441 DKSIRFRPTLVFRDHHAHLFLNIFSDILADF 471 (472)
T ss_dssp TTEEEECCCTTCCHHHHHHHHHHHHHHHHTC
T ss_pred CCEEEEECCCCCCHHHHHHHHHHHHHHHHhc
Confidence 3599999887779999999999999877654
No 201
>2rfv_A Methionine gamma-lyase; pyridoxal-5'-phosphate, PLP-dependent enzyme; HET: LLP; 1.35A {Citrobacter freundii} PDB: 1y4i_A* 3jwa_A* 3jw9_A* 3jwb_A* 3mkj_A*
Probab=22.52 E-value=3.5e+02 Score=24.65 Aligned_cols=26 Identities=4% Similarity=-0.061 Sum_probs=21.9
Q ss_pred EEEEEecCCCCChhHHHHHHHHHHHH
Q psy2480 295 TVLRICPFECSSGGDYESFLVCLDAQ 320 (337)
Q Consensus 295 ~~LRfcplnp~T~edI~~~v~~L~~~ 320 (337)
.++|+|+-...+.++|+.+.+.|++.
T Consensus 371 ~~iRls~~~~~~~~~i~~l~~al~~~ 396 (398)
T 2rfv_A 371 GLIRLSVGLEDPEDIINDLEHAIRKA 396 (398)
T ss_dssp TEEEEECCSSCHHHHHHHHHHHHHHH
T ss_pred CeEEEEecCCCHHHHHHHHHHHHHhh
Confidence 59999998766899999999988753
No 202
>3m5u_A Phosphoserine aminotransferase; alpha-beta half sandwich, csgid, amino-acid biosynthesis, cytoplasm, pyridoxal phosphate; HET: MES; 2.15A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=22.28 E-value=1.2e+02 Score=28.64 Aligned_cols=40 Identities=5% Similarity=-0.052 Sum_probs=30.7
Q ss_pred hHHHHHhcCch-hHHHHHHHHHHHHHHHHHhhccCCce-EEe
Q psy2480 39 VWTTLKSMGQT-GIQDILTFNFSLVESVRQKLSEYPCL-RIL 78 (337)
Q Consensus 39 lW~alQ~Lg~~-~I~~ri~~Af~ls~~l~~~L~~~~~I-~il 78 (337)
+-.|++++-.. |+-.+.++--.+++.+++.|++++++ ++.
T Consensus 246 l~~al~~l~~~gG~~~i~~~~~~l~~~l~~~L~~~~g~~~~~ 287 (361)
T 3m5u_A 246 FNLEMDWLLNQGGLDKVHEKNSQKATMLYECIDLSNGFYKGH 287 (361)
T ss_dssp HHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHTSTTSEEES
T ss_pred HHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHHCCCeeecc
Confidence 44566666555 67777777889999999999999987 554
No 203
>1qgn_A Protein (cystathionine gamma-synthase); methionine biosynthesis, pyridoxal 5'-phosphate, gamma-famil; HET: PLP; 2.90A {Nicotiana tabacum} SCOP: c.67.1.3 PDB: 1i41_A* 1i48_A* 1i43_A*
Probab=22.17 E-value=4.4e+02 Score=25.31 Aligned_cols=107 Identities=10% Similarity=0.007 Sum_probs=0.0
Q ss_pred hHHHHhhChhhHHHHHHHHHHHHHHHHHHHhhCCCeEEeecCCCCCCcceeeeccccCccccccc---------------
Q psy2480 178 WTTLKSMGQTGIQDILTFNFSLVESIRQKLSEYPCLRILSHGPVSGLGLKEVTSQYLPVQTILES--------------- 242 (337)
Q Consensus 178 W~~Lq~LG~d~i~~~I~~t~~La~~~~e~L~~~p~LeiL~~~~waglg~v~~~~~~~~~~~~~~~--------------- 242 (337)
|..++.+ +.+..+++...+.++.+.+.|++.|.++-+. .+
T Consensus 301 ~~~~~~l--~~l~~r~~~~~~~a~~l~~~L~~~p~v~~v~-----------------------~p~l~~~p~~~~~~~~~ 355 (445)
T 1qgn_A 301 YLIIRGM--KTLHLRVQQQNSTALRMAEILEAHPKVRHVY-----------------------YPGLQSHPEHHIAKKQM 355 (445)
T ss_dssp HHHHHHG--GGHHHHHHHHHHHHHHHHHHHHTCTTEEEEE-----------------------CTTSSSSTTHHHHHHHC
T ss_pred HHHHHhH--HHHHHHHHHHHHHHHHHHHHHhcCCCceEEE-----------------------CCCCCCCchHHHHHHhc
Q ss_pred --cceeEEEEecCCCCCCCCCcchhhHHHHHHHHHH---hhcCCCcceEEEEee------------------eCcEEEEE
Q psy2480 243 --VQSCVVFQFVPKDAGWGPVPAYYDKLNSWLGQIL---QRDVPSVSLNLTETA------------------AFGTVLRI 299 (337)
Q Consensus 243 --~lsvVvFRy~P~~~~~e~~~~y~D~LNswLgqiL---~~~~~~~~~~v~et~------------------~~G~~LRf 299 (337)
.-+++.|++...... ...+.+.| .-....+++.-.-.- ...-+||+
T Consensus 356 ~g~g~ivsf~l~~~~~~-----------~~~~l~~l~~~~i~~s~G~~~sl~~~p~~~~h~~~~~~~~~~~g~~~~~iRl 424 (445)
T 1qgn_A 356 TGFGGAVSFEVDGDLLT-----------TAKFVDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSDRAKYGIMDNLVRF 424 (445)
T ss_dssp SCCCSEEEEEESSCHHH-----------HHHHHHHCSSSEECSCCCSSSCEEECHHHHHSTTSCHHHHHTTTCCSSEEEE
T ss_pred cCCCcEEEEEECCCHHH-----------HHHHHHhCCCceEeccCCCCceeeecccccccccCCHHHHHhcCCCCCeEEE
Q ss_pred ecCCCCChhHHHHHHHHHHHHHhhh
Q psy2480 300 CPFECSSGGDYESFLVCLDAQVYSG 324 (337)
Q Consensus 300 cplnp~T~edI~~~v~~L~~~~~il 324 (337)
+.- .||++.+++.|++.++.+
T Consensus 425 SvG----~Edid~li~~L~~al~~~ 445 (445)
T 1qgn_A 425 SFG----VEDFDDLKADILQALDSI 445 (445)
T ss_dssp ECC----SSCHHHHHHHHHHHHHHC
T ss_pred Eec----cCCHHHHHHHHHHHHhhC
No 204
>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}
Probab=22.11 E-value=53 Score=29.43 Aligned_cols=43 Identities=16% Similarity=0.207 Sum_probs=38.2
Q ss_pred hchhhHHHHHhcCchhHHHHHHHHHHHHHHHHHhhccCCceEEe
Q psy2480 35 IALPVWTTLKSMGQTGIQDILTFNFSLVESVRQKLSEYPCLRIL 78 (337)
Q Consensus 35 ~aLplW~alQ~Lg~~~I~~ri~~Af~ls~~l~~~L~~~~~I~il 78 (337)
..+..|.+++.++.+++.+++++.....+.+.+.|+++ ++++.
T Consensus 291 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~ 333 (397)
T 3f9t_A 291 GGACTYAVLRYLGREGQRKIVNECMENTLYLYKKLKEN-NFKPV 333 (397)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCCBS
T ss_pred hHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHC-CCEEE
Confidence 46788999999999999999999999999999999998 77655
No 205
>1e5e_A MGL, methionine gamma-lyase; methionine biosynthesis, PLP-dependent enzymes, C-S gamma lyase; HET: PPJ; 2.18A {Trichomonas vaginalis} SCOP: c.67.1.3 PDB: 1e5f_A*
Probab=21.96 E-value=2.9e+02 Score=25.69 Aligned_cols=28 Identities=7% Similarity=0.049 Sum_probs=21.9
Q ss_pred EEEEEecCCCCChhHHHHHHHHHHHHHhhhhc
Q psy2480 295 TVLRICPFECSSGGDYESFLVCLDAQVYSGSQ 326 (337)
Q Consensus 295 ~~LRfcplnp~T~edI~~~v~~L~~~~~il~~ 326 (337)
-++|+++-. +|++.+++.|++.++.+..
T Consensus 370 ~~iRis~g~----e~~~~li~~l~~al~~~~~ 397 (404)
T 1e5e_A 370 GMIRLSVGI----EDADELIADFKQGLDALLR 397 (404)
T ss_dssp TEEEEECCS----SCHHHHHHHHHHHHHHHHC
T ss_pred CeEEEEeCC----CCHHHHHHHHHHHHHHHHH
Confidence 489999876 8899999998887665443
No 206
>4adb_A Succinylornithine transaminase; transferase, PLP enzymes, aminotransferase; HET: PLP; 2.20A {Escherichia coli} PDB: 4adc_A* 4add_A* 4ade_A
Probab=21.83 E-value=4.4e+02 Score=23.67 Aligned_cols=32 Identities=22% Similarity=0.109 Sum_probs=26.6
Q ss_pred cEEEEEecCCCCChhHHHHHHHHHHHHHhhhh
Q psy2480 294 GTVLRICPFECSSGGDYESFLVCLDAQVYSGS 325 (337)
Q Consensus 294 G~~LRfcplnp~T~edI~~~v~~L~~~~~il~ 325 (337)
+.++|++|--..|.+||+++++.|++.+..+.
T Consensus 370 ~~~iRi~~~~~~~~e~i~~~~~~l~~~l~~~~ 401 (406)
T 4adb_A 370 GNVVRFAPALNVSEEEVTTGLDRFAAACEHFV 401 (406)
T ss_dssp TTEEEECCCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCeEEEECCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 46999987666689999999999999887654
No 207
>3ppl_A Aspartate aminotransferase; dimer, PLP-dependent transferase-like fold structural genomics, joint center for structural genomics; HET: MSE PLP UNL; 1.25A {Corynebacterium glutamicum}
Probab=20.29 E-value=3.3e+02 Score=25.01 Aligned_cols=30 Identities=17% Similarity=0.090 Sum_probs=24.8
Q ss_pred cEEEEEecCCCCChhHHHHHHHHHHHHHhhh
Q psy2480 294 GTVLRICPFECSSGGDYESFLVCLDAQVYSG 324 (337)
Q Consensus 294 G~~LRfcplnp~T~edI~~~v~~L~~~~~il 324 (337)
..++|+|+-.. +.++|++.++.|.+.+..+
T Consensus 391 ~~~~Ris~~~~-~~~~i~~~~~~l~~~l~~~ 420 (427)
T 3ppl_A 391 NKNLRLAPSLP-PVEELEVAMDGVATCVLLA 420 (427)
T ss_dssp SCEEEECCSSS-CHHHHHHHHHHHHHHHHHH
T ss_pred CCeEEEECCCC-CHHHHHHHHHHHHHHHHHH
Confidence 36999999555 8999999999998877654
Done!