BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy2490
(64 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|357624655|gb|EHJ75351.1| hypothetical protein KGM_09231 [Danaus plexippus]
Length = 143
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/46 (71%), Positives = 40/46 (86%)
Query: 17 KYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
K+ +D+SKVPKI+E D+ E+FVRGSGPGG AV K +NCVVLTHIPT
Sbjct: 25 KHTIDFSKVPKINECDLTEQFVRGSGPGGSAVNKNSNCVVLTHIPT 70
>gi|307170845|gb|EFN62956.1| Uncharacterized protein C12orf65-like protein [Camponotus
floridanus]
Length = 138
Score = 74.3 bits (181), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 32/46 (69%), Positives = 37/46 (80%)
Query: 17 KYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
K LDYSKVPK+DE D++E+F+RGSGPGGQA KTNN V L H PT
Sbjct: 20 KRHLDYSKVPKLDEADLEEKFIRGSGPGGQATNKTNNAVSLKHKPT 65
>gi|332030644|gb|EGI70332.1| Uncharacterized protein C12orf65-like protein [Acromyrmex
echinatior]
Length = 163
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/48 (66%), Positives = 40/48 (83%), Gaps = 1/48 (2%)
Query: 15 FRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
F++Y LDYS VPK+DE D++E+F+RGSGPGGQA KTNN V+L H PT
Sbjct: 44 FKRY-LDYSNVPKLDEIDLEEQFIRGSGPGGQATNKTNNAVLLKHKPT 90
>gi|195334889|ref|XP_002034109.1| GM21684 [Drosophila sechellia]
gi|194126079|gb|EDW48122.1| GM21684 [Drosophila sechellia]
Length = 146
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 45/64 (70%), Gaps = 1/64 (1%)
Query: 1 MSIFRRHLSLASSLFR-KYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTH 59
+ + R L+L R K +LDYS+ P + E DI+E F+RGSGPGGQAV KT+NCV L H
Sbjct: 2 LRVLVRFLALPPPAVRCKSNLDYSRFPALQESDIEETFMRGSGPGGQAVNKTSNCVFLRH 61
Query: 60 IPTD 63
+PT+
Sbjct: 62 LPTN 65
>gi|195488245|ref|XP_002092233.1| GE11778 [Drosophila yakuba]
gi|194178334|gb|EDW91945.1| GE11778 [Drosophila yakuba]
Length = 146
Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/59 (57%), Positives = 43/59 (72%), Gaps = 1/59 (1%)
Query: 6 RHLSLASSLFR-KYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTD 63
R L+L R K +LDYS+ P + E DI+E F+RGSGPGGQAV KT+NCV L H+PT+
Sbjct: 7 RFLALPQPAVRCKSNLDYSRFPALQESDIEETFMRGSGPGGQAVNKTSNCVFLRHLPTN 65
>gi|24654113|ref|NP_725560.1| CG30100 [Drosophila melanogaster]
gi|21627121|gb|AAM68513.1| CG30100 [Drosophila melanogaster]
gi|157816290|gb|ABV82139.1| AT22563p2 [Drosophila melanogaster]
Length = 146
Score = 72.8 bits (177), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/59 (57%), Positives = 44/59 (74%), Gaps = 1/59 (1%)
Query: 6 RHLSLASSLFR-KYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTD 63
R L+L + R K +LDYS+ P + E DI+E F+RGSGPGGQAV KT+NCV L H+PT+
Sbjct: 7 RFLALPPTAVRCKSNLDYSRFPVLQESDIEETFMRGSGPGGQAVNKTSNCVFLRHLPTN 65
>gi|198456857|ref|XP_001360468.2| GA15649 [Drosophila pseudoobscura pseudoobscura]
gi|198135777|gb|EAL25043.2| GA15649 [Drosophila pseudoobscura pseudoobscura]
Length = 181
Score = 72.8 bits (177), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 38/45 (84%)
Query: 19 DLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTD 63
+LDYS+ PK+ E +I+E F+RGSGPGGQAV KT+NCV L H+PT+
Sbjct: 60 NLDYSRYPKLQESEIEETFMRGSGPGGQAVNKTSNCVFLRHLPTN 104
>gi|195121186|ref|XP_002005101.1| GI19248 [Drosophila mojavensis]
gi|193910169|gb|EDW09036.1| GI19248 [Drosophila mojavensis]
Length = 141
Score = 72.8 bits (177), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/57 (59%), Positives = 41/57 (71%), Gaps = 3/57 (5%)
Query: 9 SLASSLFR---KYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
SL+S+L R LDYS+ P + E DI+E +RGSGPGGQAV KTNNCV L H+PT
Sbjct: 10 SLSSNLCRLASNAHLDYSRYPTLQESDIEETLMRGSGPGGQAVNKTNNCVFLRHLPT 66
>gi|195150095|ref|XP_002015990.1| GL10726 [Drosophila persimilis]
gi|194109837|gb|EDW31880.1| GL10726 [Drosophila persimilis]
Length = 181
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 38/45 (84%)
Query: 19 DLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTD 63
+LDYS+ PK+ E +I+E F+RGSGPGGQAV KT+NCV L H+PT+
Sbjct: 60 NLDYSRYPKLQESEIEETFMRGSGPGGQAVNKTSNCVFLRHLPTN 104
>gi|194882555|ref|XP_001975376.1| GG20592 [Drosophila erecta]
gi|190658563|gb|EDV55776.1| GG20592 [Drosophila erecta]
Length = 148
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/59 (57%), Positives = 43/59 (72%), Gaps = 1/59 (1%)
Query: 6 RHLSLASSLFR-KYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTD 63
R L+L R K +LDYS+ P + E DI+E F+RGSGPGGQAV KT+NCV L H+PT+
Sbjct: 7 RFLALPPPAVRCKSNLDYSRFPALQESDIEETFMRGSGPGGQAVNKTSNCVFLRHLPTN 65
>gi|195558953|ref|XP_002077323.1| GD20369 [Drosophila simulans]
gi|194202425|gb|EDX16001.1| GD20369 [Drosophila simulans]
Length = 146
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 30/47 (63%), Positives = 38/47 (80%)
Query: 17 KYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTD 63
K +LDYS+ P + E DI+E F+RGSGPGGQAV KT+NCV L H+PT+
Sbjct: 19 KSNLDYSRFPALQESDIEETFMRGSGPGGQAVNKTSNCVFLRHLPTN 65
>gi|350412608|ref|XP_003489703.1| PREDICTED: probable peptide chain release factor C12orf65
homolog, mitochondrial-like [Bombus impatiens]
Length = 172
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 31/50 (62%), Positives = 40/50 (80%), Gaps = 2/50 (4%)
Query: 15 FRKYD--LDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
++ Y+ LDYSKVP+++E D+QE+ VRGSGPGGQA KTNN V+L H PT
Sbjct: 50 YKSYNRFLDYSKVPRLEENDLQEQHVRGSGPGGQATNKTNNAVILKHKPT 99
>gi|307197489|gb|EFN78723.1| Uncharacterized protein C12orf65-like protein [Harpegnathos
saltator]
Length = 165
Score = 72.0 bits (175), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 31/48 (64%), Positives = 40/48 (83%), Gaps = 1/48 (2%)
Query: 15 FRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+++Y LDYS +PK++E D++E+FVRGSGPGGQA KTNN VVL H PT
Sbjct: 46 YKRY-LDYSNLPKLEEADLKEQFVRGSGPGGQATNKTNNAVVLKHKPT 92
>gi|195382982|ref|XP_002050205.1| GJ20325 [Drosophila virilis]
gi|195404316|ref|XP_002060447.1| GJ15534 [Drosophila virilis]
gi|194145002|gb|EDW61398.1| GJ20325 [Drosophila virilis]
gi|194156312|gb|EDW71496.1| GJ15534 [Drosophila virilis]
Length = 142
Score = 71.2 bits (173), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 33/57 (57%), Positives = 41/57 (71%), Gaps = 3/57 (5%)
Query: 9 SLASSLFR---KYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+L+S+L R LDYS+ P + E DI+E +RGSGPGGQAV KTNNCV L H+PT
Sbjct: 10 ALSSNLCRLASTAHLDYSRYPSLQESDIEETLLRGSGPGGQAVNKTNNCVFLRHLPT 66
>gi|195029889|ref|XP_001987804.1| GH22113 [Drosophila grimshawi]
gi|193903804|gb|EDW02671.1| GH22113 [Drosophila grimshawi]
Length = 148
Score = 70.9 bits (172), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 29/43 (67%), Positives = 34/43 (79%)
Query: 20 LDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
LDYS+ P + E DI+E +RGSGPGGQAV KTNNCV L H+PT
Sbjct: 26 LDYSRYPSLQESDIEETLMRGSGPGGQAVNKTNNCVFLRHLPT 68
>gi|157131147|ref|XP_001662139.1| hypothetical protein AaeL_AAEL012009 [Aedes aegypti]
gi|157137107|ref|XP_001663890.1| hypothetical protein AaeL_AAEL013711 [Aedes aegypti]
gi|108869799|gb|EAT34024.1| AAEL013711-PA [Aedes aegypti]
gi|108871632|gb|EAT35857.1| AAEL012009-PA [Aedes aegypti]
Length = 142
Score = 70.9 bits (172), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 41/55 (74%), Gaps = 1/55 (1%)
Query: 9 SLASSLFR-KYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
S S L R K +D SKVP + + D++E FVRGSGPGGQAVAKTNN VVLTH PT
Sbjct: 13 SFRSPLIRWKTTIDTSKVPALRDDDLEETFVRGSGPGGQAVAKTNNKVVLTHKPT 67
>gi|380018586|ref|XP_003693208.1| PREDICTED: probable peptide chain release factor C12orf65
homolog, mitochondrial-like [Apis florea]
Length = 148
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 29/43 (67%), Positives = 37/43 (86%)
Query: 20 LDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
LDYS+VPK++E D+QE+FV+GSGPGGQA KT+N +VL H PT
Sbjct: 33 LDYSRVPKLEESDLQEQFVKGSGPGGQATNKTSNAIVLKHKPT 75
>gi|224924358|gb|ACN69129.1| mitochondrial polypeptide chain release factor [Stomoxys
calcitrans]
Length = 183
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 39/49 (79%)
Query: 15 FRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTD 63
+ LDYS+ P ++E+D++E F RGSGPGGQA+ KT+NCV+L H+PT+
Sbjct: 49 LKHQQLDYSRYPTLNEEDLEETFTRGSGPGGQALNKTSNCVLLRHLPTN 97
>gi|332373588|gb|AEE61935.1| unknown [Dendroctonus ponderosae]
Length = 138
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 49/65 (75%), Gaps = 5/65 (7%)
Query: 3 IFRR-HLSLASSLFR----KYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVL 57
+F+R L + S FR K +DYS+VP ++E+D++E+ V+GSGPGGQ V+KT++C+VL
Sbjct: 1 MFQRLRLVVCSVNFRLLSSKKHIDYSQVPALNEQDLEEKQVKGSGPGGQKVSKTSSCIVL 60
Query: 58 THIPT 62
HIPT
Sbjct: 61 KHIPT 65
>gi|189241033|ref|XP_971712.2| PREDICTED: similar to AGAP012195-PA [Tribolium castaneum]
Length = 132
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/53 (56%), Positives = 41/53 (77%)
Query: 10 LASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
L S+ R +DYS+VP++ E +++E+ VRGSGPGGQA KT+NCVVL H+PT
Sbjct: 7 LIFSIVRFKHIDYSRVPQLVESELEEQHVRGSGPGGQATNKTSNCVVLKHVPT 59
>gi|194757281|ref|XP_001960893.1| GF13589 [Drosophila ananassae]
gi|190622191|gb|EDV37715.1| GF13589 [Drosophila ananassae]
Length = 141
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/44 (65%), Positives = 35/44 (79%)
Query: 20 LDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTD 63
LDYS+ P + E DI+E F RGSGPGGQAV KT+NCV L H+PT+
Sbjct: 24 LDYSRYPTLQESDIEETFTRGSGPGGQAVNKTSNCVFLRHLPTN 67
>gi|270013378|gb|EFA09826.1| hypothetical protein TcasGA2_TC011973 [Tribolium castaneum]
Length = 179
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/53 (56%), Positives = 41/53 (77%)
Query: 10 LASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
L S+ R +DYS+VP++ E +++E+ VRGSGPGGQA KT+NCVVL H+PT
Sbjct: 54 LIFSIVRFKHIDYSRVPQLVESELEEQHVRGSGPGGQATNKTSNCVVLKHVPT 106
>gi|322801028|gb|EFZ21809.1| hypothetical protein SINV_15156 [Solenopsis invicta]
Length = 220
Score = 69.3 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 30/46 (65%), Positives = 38/46 (82%)
Query: 17 KYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
K+ LDYS VPK++E D++E+F+RGSGPGGQA KTNN V+L H PT
Sbjct: 102 KHYLDYSNVPKLNEADLEEQFIRGSGPGGQATNKTNNAVLLKHKPT 147
>gi|328791281|ref|XP_003251540.1| PREDICTED: peptide chain release factor 2-like [Apis mellifera]
Length = 178
Score = 68.9 bits (167), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 28/43 (65%), Positives = 36/43 (83%)
Query: 20 LDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
LDYS+VPK++E D+QE+FV+G GPGGQA KT+N +VL H PT
Sbjct: 63 LDYSRVPKLEESDLQEQFVKGCGPGGQATNKTSNAIVLKHKPT 105
>gi|170049046|ref|XP_001853980.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167870988|gb|EDS34371.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 142
Score = 68.9 bits (167), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/46 (67%), Positives = 38/46 (82%)
Query: 17 KYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
K +D SKVP + ++D++E FVRGSGPGGQ+VAKTNN VVLTH PT
Sbjct: 22 KTTIDVSKVPVLRDEDLEEAFVRGSGPGGQSVAKTNNKVVLTHKPT 67
>gi|383847184|ref|XP_003699235.1| PREDICTED: probable peptide chain release factor C12orf65
homolog, mitochondrial-like [Megachile rotundata]
Length = 162
Score = 67.8 bits (164), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 27/43 (62%), Positives = 36/43 (83%)
Query: 20 LDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
LDY+ VPK++E D++E+FV+GSGPGGQA KT+N VV+ H PT
Sbjct: 47 LDYTNVPKLEESDLEEQFVKGSGPGGQATNKTSNAVVIKHKPT 89
>gi|118792472|ref|XP_320337.3| AGAP012195-PA [Anopheles gambiae str. PEST]
gi|116116915|gb|EAA00473.4| AGAP012195-PA [Anopheles gambiae str. PEST]
Length = 151
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/43 (67%), Positives = 38/43 (88%)
Query: 20 LDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+D+S++P + ++D++E FVRGSGPGGQAVAKTNN VVLTH PT
Sbjct: 32 VDHSRLPVLRDEDLEESFVRGSGPGGQAVAKTNNKVVLTHKPT 74
>gi|390353656|ref|XP_798467.3| PREDICTED: probable peptide chain release factor C12orf65 homolog,
mitochondrial-like [Strongylocentrotus purpuratus]
Length = 223
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/40 (67%), Positives = 35/40 (87%)
Query: 23 SKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
SK+P + E++++E+FVRGSGPGGQA KT+NCVVL HIPT
Sbjct: 94 SKLPDLKEEELEEQFVRGSGPGGQATNKTSNCVVLKHIPT 133
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 18/29 (62%), Positives = 25/29 (86%)
Query: 23 SKVPKIDEKDIQERFVRGSGPGGQAVAKT 51
SK+P + E++++E+FVRGSGPGGQA KT
Sbjct: 38 SKLPDLKEEELEEQFVRGSGPGGQATNKT 66
>gi|193599082|ref|XP_001946758.1| PREDICTED: probable peptide chain release factor C12orf65
homolog, mitochondrial-like isoform 1 [Acyrthosiphon
pisum]
gi|328703300|ref|XP_003242163.1| PREDICTED: probable peptide chain release factor C12orf65
homolog, mitochondrial-like [Acyrthosiphon pisum]
gi|328703303|ref|XP_003242164.1| PREDICTED: probable peptide chain release factor C12orf65
homolog, mitochondrial-like [Acyrthosiphon pisum]
Length = 150
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/55 (56%), Positives = 41/55 (74%), Gaps = 1/55 (1%)
Query: 9 SLASSLF-RKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
S++ +LF +K +D SKVP I+E +++E FV+GSGPGG AV K NCVVL H PT
Sbjct: 21 SISLTLFNKKQTIDRSKVPIINENELEEMFVKGSGPGGSAVNKNANCVVLKHKPT 75
>gi|346474116|gb|AEO36902.1| hypothetical protein [Amblyomma maculatum]
Length = 163
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 36/45 (80%)
Query: 18 YDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+ +D SKVP ++E+D+ E+FV GSGPGGQAV K +NCVVL H PT
Sbjct: 37 HSIDRSKVPVLNEEDLVEQFVHGSGPGGQAVNKLSNCVVLCHTPT 81
>gi|312370878|gb|EFR19185.1| hypothetical protein AND_22936 [Anopheles darlingi]
Length = 225
Score = 65.9 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 32/49 (65%), Positives = 39/49 (79%), Gaps = 1/49 (2%)
Query: 14 LFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+F K +D S+VP + E D++E FVRGSGPGGQ+VAKTNN VVLTH PT
Sbjct: 101 MFSK-SIDNSRVPVLQEDDLEESFVRGSGPGGQSVAKTNNKVVLTHKPT 148
>gi|410923066|ref|XP_003975003.1| PREDICTED: probable peptide chain release factor C12orf65
homolog, mitochondrial-like [Takifugu rubripes]
Length = 167
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 39/60 (65%)
Query: 3 IFRRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+ R H S LF +P ++E D++E+FVRGSGPGGQA KT+NCVVL HIP+
Sbjct: 26 LLRPHPSGLPCLFAASKKGLIDLPILNEDDLEEQFVRGSGPGGQATNKTSNCVVLKHIPS 85
>gi|391344326|ref|XP_003746452.1| PREDICTED: probable peptide chain release factor C12orf65 homolog,
mitochondrial-like [Metaseiulus occidentalis]
Length = 207
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/43 (67%), Positives = 35/43 (81%)
Query: 20 LDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+D S+VP I E+DI E+FV+GSGPGGQ+V KT NCVVL H PT
Sbjct: 65 VDKSRVPVIGEEDIIEQFVKGSGPGGQSVNKTVNCVVLCHRPT 107
>gi|213514146|ref|NP_001134302.1| CL065 protein [Salmo salar]
gi|209732210|gb|ACI66974.1| C12orf65 homolog [Salmo salar]
Length = 166
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/42 (64%), Positives = 34/42 (80%)
Query: 21 DYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
DY +P ++E ++ E+FVRGSGPGGQA KT+NCVVL HIPT
Sbjct: 44 DYIDLPVLNEDELDEQFVRGSGPGGQATNKTSNCVVLRHIPT 85
>gi|209736218|gb|ACI68978.1| C12orf65 homolog [Salmo salar]
Length = 166
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/42 (64%), Positives = 34/42 (80%)
Query: 21 DYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
DY +P ++E ++ E+FVRGSGPGGQA KT+NCVVL HIPT
Sbjct: 44 DYIDLPVLNEDELDEQFVRGSGPGGQATNKTSNCVVLRHIPT 85
>gi|156552109|ref|XP_001605206.1| PREDICTED: probable peptide chain release factor C12orf65
homolog, mitochondrial-like [Nasonia vitripennis]
Length = 159
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 39/54 (72%)
Query: 9 SLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
S S K +D SKVPKI+E D++ ++VRGSGPGGQ+ KT+N VV+ H+PT
Sbjct: 26 SAQQSYSMKSRIDTSKVPKINEDDLEIQYVRGSGPGGQSTNKTSNNVVMKHLPT 79
>gi|427783107|gb|JAA57005.1| Putative translational termination [Rhipicephalus pulchellus]
Length = 163
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 35/45 (77%)
Query: 18 YDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+ +D SKVP + E+D+ E+F+ GSGPGGQAV K +NCV+L H PT
Sbjct: 38 HRIDRSKVPVLKEEDVVEQFIHGSGPGGQAVNKLSNCVMLCHTPT 82
>gi|229368188|gb|ACQ59074.1| C12orf65 homolog [Anoplopoma fimbria]
Length = 169
Score = 62.4 bits (150), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 26/42 (61%), Positives = 33/42 (78%)
Query: 21 DYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
D +P +DE +++E+FVRGSGPGGQA KT NCVVL HIP+
Sbjct: 47 DLIDLPVLDEDELEEQFVRGSGPGGQATNKTGNCVVLKHIPS 88
>gi|187607772|ref|NP_001119948.1| uncharacterized protein LOC100004874 [Danio rerio]
gi|162416112|sp|A5WUX7.1|CL065_DANRE RecName: Full=Probable peptide chain release factor C12orf65
homolog, mitochondrial; Flags: Precursor
Length = 156
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 38/47 (80%), Gaps = 3/47 (6%)
Query: 16 RKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+KY ++ +P + E++++E+FVRGSGPGGQA KT+NCVVL HIP+
Sbjct: 33 KKYQIE---LPVVHEEELEEQFVRGSGPGGQATNKTSNCVVLRHIPS 76
>gi|189519733|ref|XP_001340041.2| PREDICTED: probable peptide chain release factor C12orf65
homolog, mitochondrial [Danio rerio]
Length = 156
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 38/47 (80%), Gaps = 3/47 (6%)
Query: 16 RKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+KY ++ +P + E++++E+FVRGSGPGGQA KT+NCVVL HIP+
Sbjct: 33 KKYQIE---LPVVHEEELEEQFVRGSGPGGQATNKTSNCVVLRHIPS 76
>gi|449476622|ref|XP_002189696.2| PREDICTED: probable peptide chain release factor C12orf65
homolog, mitochondrial [Taeniopygia guttata]
Length = 162
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 25/36 (69%), Positives = 30/36 (83%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+I E D++E+FVRG GPGGQA KTNNCVVL HIP+
Sbjct: 52 EISEADLEEQFVRGDGPGGQATNKTNNCVVLKHIPS 87
>gi|432873961|ref|XP_004072403.1| PREDICTED: probable peptide chain release factor C12orf65
homolog, mitochondrial-like [Oryzias latipes]
Length = 168
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 26/42 (61%), Positives = 33/42 (78%)
Query: 21 DYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
D + P + E +++E+FVRGSGPGGQA KT+NCVVL HIPT
Sbjct: 45 DLTDFPVLVEDELEEQFVRGSGPGGQATNKTSNCVVLKHIPT 86
>gi|225717004|gb|ACO14348.1| C12orf65 homolog [Esox lucius]
Length = 167
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 26/42 (61%), Positives = 33/42 (78%)
Query: 21 DYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
DY +P ++E ++ E+FVRGSGPGGQA KT+NCVVL H PT
Sbjct: 45 DYIDLPALNEDELDEQFVRGSGPGGQATNKTSNCVVLRHNPT 86
>gi|225715830|gb|ACO13761.1| C12orf65 homolog [Esox lucius]
Length = 167
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 26/42 (61%), Positives = 33/42 (78%)
Query: 21 DYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
DY +P ++E ++ E+FVRGSGPGGQA KT+NCVVL H PT
Sbjct: 45 DYIDLPALNEDELDEQFVRGSGPGGQATNKTSNCVVLRHNPT 86
>gi|47226435|emb|CAG08451.1| unnamed protein product [Tetraodon nigroviridis]
Length = 156
Score = 60.8 bits (146), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 25/37 (67%), Positives = 32/37 (86%)
Query: 26 PKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
P ++E D++E+FVRGSGPGGQA KT+NCVVL HIP+
Sbjct: 52 PVLNEDDLEEQFVRGSGPGGQATNKTSNCVVLKHIPS 88
>gi|156374287|ref|XP_001629739.1| predicted protein [Nematostella vectensis]
gi|156216746|gb|EDO37676.1| predicted protein [Nematostella vectensis]
Length = 95
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/41 (63%), Positives = 31/41 (75%)
Query: 22 YSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
Y V K+ E+DI+ERFV+G G GGQ V KTNNCV L H+PT
Sbjct: 1 YYHVVKLQEEDIEERFVKGWGKGGQKVNKTNNCVELRHVPT 41
>gi|348528334|ref|XP_003451673.1| PREDICTED: probable peptide chain release factor C12orf65
homolog, mitochondrial-like [Oreochromis niloticus]
Length = 162
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/42 (61%), Positives = 33/42 (78%)
Query: 21 DYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
D +P + E +++E+FVRGSGPGGQA KT+NCVVL HIPT
Sbjct: 40 DLIDLPVLVEDELEEQFVRGSGPGGQATNKTSNCVVLKHIPT 81
>gi|410976508|ref|XP_003994662.1| PREDICTED: probable peptide chain release factor C12orf65
homolog, mitochondrial [Felis catus]
Length = 167
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/38 (63%), Positives = 32/38 (84%)
Query: 25 VPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+P +DE D++E+FV+G GPGGQA KT+NCVVL HIP+
Sbjct: 53 LPPLDESDLEEQFVKGHGPGGQATNKTSNCVVLKHIPS 90
>gi|156343066|ref|XP_001621028.1| hypothetical protein NEMVEDRAFT_v1g7994 [Nematostella vectensis]
gi|156206594|gb|EDO28928.1| predicted protein [Nematostella vectensis]
Length = 87
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/41 (63%), Positives = 31/41 (75%)
Query: 22 YSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
Y V K+ E+DI+ERFV+G G GGQ V KTNNCV L H+PT
Sbjct: 1 YYHVVKLQEEDIEERFVKGWGKGGQKVNKTNNCVELRHVPT 41
>gi|355735813|gb|AES11793.1| hypothetical protein [Mustela putorius furo]
Length = 153
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 23/42 (54%), Positives = 34/42 (80%)
Query: 21 DYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
D +P ++E+D++E+FV+G GPGGQA KT+NCVVL H+P+
Sbjct: 36 DRPALPPLEERDLEEQFVKGHGPGGQATNKTSNCVVLRHVPS 77
>gi|291414256|ref|XP_002723382.1| PREDICTED: hypothetical protein [Oryctolagus cuniculus]
Length = 165
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 22/42 (52%), Positives = 34/42 (80%)
Query: 21 DYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
++ +P +DE +++E+FV+G GPGGQA KT+NCVVL H+P+
Sbjct: 48 EWPPLPPLDENELREQFVKGHGPGGQATNKTSNCVVLKHVPS 89
>gi|402888030|ref|XP_003907380.1| PREDICTED: probable peptide chain release factor C12orf65
homolog, mitochondrial isoform 1 [Papio anubis]
gi|402888032|ref|XP_003907381.1| PREDICTED: probable peptide chain release factor C12orf65
homolog, mitochondrial isoform 2 [Papio anubis]
gi|402888034|ref|XP_003907382.1| PREDICTED: probable peptide chain release factor C12orf65
homolog, mitochondrial isoform 3 [Papio anubis]
gi|402888036|ref|XP_003907383.1| PREDICTED: probable peptide chain release factor C12orf65
homolog, mitochondrial isoform 4 [Papio anubis]
Length = 169
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/42 (57%), Positives = 33/42 (78%)
Query: 21 DYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
DY + +DE +++E+FV+G GPGGQA KT+NCVVL HIP+
Sbjct: 51 DYPALLSLDENELEEQFVKGHGPGGQATNKTSNCVVLKHIPS 92
>gi|355564798|gb|EHH21298.1| hypothetical protein EGK_04319, partial [Macaca mulatta]
gi|355786636|gb|EHH66819.1| hypothetical protein EGM_03875, partial [Macaca fascicularis]
Length = 165
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/42 (57%), Positives = 33/42 (78%)
Query: 21 DYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
DY + +DE +++E+FV+G GPGGQA KT+NCVVL HIP+
Sbjct: 47 DYPALLSLDENELEEQFVKGHGPGGQATNKTSNCVVLKHIPS 88
>gi|395513828|ref|XP_003761124.1| PREDICTED: probable peptide chain release factor C12orf65
homolog, mitochondrial-like [Sarcophilus harrisii]
Length = 185
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/35 (68%), Positives = 30/35 (85%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
++E D++E+FV+G GPGGQA KTNNCVVL HIPT
Sbjct: 53 LNETDLEEQFVKGHGPGGQATNKTNNCVVLKHIPT 87
>gi|395846771|ref|XP_003796067.1| PREDICTED: probable peptide chain release factor C12orf65
homolog, mitochondrial [Otolemur garnettii]
Length = 183
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/35 (68%), Positives = 30/35 (85%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+DE D++E+FV+G GPGGQA KTNNCVVL HIP+
Sbjct: 55 LDENDLKEQFVKGHGPGGQATNKTNNCVVLKHIPS 89
>gi|297263790|ref|XP_001097466.2| PREDICTED: uncharacterized protein C12orf65-like isoform 1
[Macaca mulatta]
gi|297263792|ref|XP_002798863.1| PREDICTED: uncharacterized protein C12orf65-like isoform 2
[Macaca mulatta]
Length = 122
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/42 (57%), Positives = 33/42 (78%)
Query: 21 DYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
DY + +DE +++E+FV+G GPGGQA KT+NCVVL HIP+
Sbjct: 51 DYPALLSLDENELEEQFVKGHGPGGQATNKTSNCVVLKHIPS 92
>gi|55639161|ref|XP_509459.1| PREDICTED: probable peptide chain release factor C12orf65
homolog, mitochondrial isoform 5 [Pan troglodytes]
gi|114647627|ref|XP_001169334.1| PREDICTED: probable peptide chain release factor C12orf65
homolog, mitochondrial isoform 1 [Pan troglodytes]
gi|114647631|ref|XP_001169383.1| PREDICTED: probable peptide chain release factor C12orf65
homolog, mitochondrial isoform 3 [Pan troglodytes]
gi|332840720|ref|XP_003314049.1| PREDICTED: probable peptide chain release factor C12orf65
homolog, mitochondrial [Pan troglodytes]
gi|332840723|ref|XP_003314050.1| PREDICTED: probable peptide chain release factor C12orf65
homolog, mitochondrial [Pan troglodytes]
gi|410047478|ref|XP_003952395.1| PREDICTED: probable peptide chain release factor C12orf65
homolog, mitochondrial [Pan troglodytes]
gi|410206856|gb|JAA00647.1| chromosome 12 open reading frame 65 [Pan troglodytes]
gi|410206858|gb|JAA00648.1| chromosome 12 open reading frame 65 [Pan troglodytes]
gi|410253958|gb|JAA14946.1| chromosome 12 open reading frame 65 [Pan troglodytes]
gi|410253960|gb|JAA14947.1| chromosome 12 open reading frame 65 [Pan troglodytes]
gi|410253962|gb|JAA14948.1| chromosome 12 open reading frame 65 [Pan troglodytes]
gi|410253964|gb|JAA14949.1| chromosome 12 open reading frame 65 [Pan troglodytes]
gi|410291932|gb|JAA24566.1| chromosome 12 open reading frame 65 [Pan troglodytes]
gi|410291934|gb|JAA24567.1| chromosome 12 open reading frame 65 [Pan troglodytes]
gi|410291936|gb|JAA24568.1| chromosome 12 open reading frame 65 [Pan troglodytes]
gi|410291938|gb|JAA24569.1| chromosome 12 open reading frame 65 [Pan troglodytes]
gi|410336993|gb|JAA37443.1| chromosome 12 open reading frame 65 [Pan troglodytes]
Length = 166
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/42 (57%), Positives = 33/42 (78%)
Query: 21 DYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
DY + +DE +++E+FV+G GPGGQA KT+NCVVL HIP+
Sbjct: 48 DYPALLSLDENELEEQFVKGHGPGGQATNKTSNCVVLKHIPS 89
>gi|397481889|ref|XP_003812169.1| PREDICTED: probable peptide chain release factor C12orf65
homolog, mitochondrial isoform 1 [Pan paniscus]
gi|397481891|ref|XP_003812170.1| PREDICTED: probable peptide chain release factor C12orf65
homolog, mitochondrial isoform 2 [Pan paniscus]
gi|397481893|ref|XP_003812171.1| PREDICTED: probable peptide chain release factor C12orf65
homolog, mitochondrial isoform 3 [Pan paniscus]
gi|397481895|ref|XP_003812172.1| PREDICTED: probable peptide chain release factor C12orf65
homolog, mitochondrial isoform 4 [Pan paniscus]
gi|397481897|ref|XP_003812173.1| PREDICTED: probable peptide chain release factor C12orf65
homolog, mitochondrial isoform 5 [Pan paniscus]
gi|426374551|ref|XP_004054135.1| PREDICTED: probable peptide chain release factor C12orf65
homolog, mitochondrial isoform 1 [Gorilla gorilla
gorilla]
gi|426374553|ref|XP_004054136.1| PREDICTED: probable peptide chain release factor C12orf65
homolog, mitochondrial isoform 2 [Gorilla gorilla
gorilla]
gi|426374555|ref|XP_004054137.1| PREDICTED: probable peptide chain release factor C12orf65
homolog, mitochondrial isoform 3 [Gorilla gorilla
gorilla]
gi|426374557|ref|XP_004054138.1| PREDICTED: probable peptide chain release factor C12orf65
homolog, mitochondrial isoform 4 [Gorilla gorilla
gorilla]
gi|426374559|ref|XP_004054139.1| PREDICTED: probable peptide chain release factor C12orf65
homolog, mitochondrial isoform 5 [Gorilla gorilla
gorilla]
gi|426374561|ref|XP_004054140.1| PREDICTED: probable peptide chain release factor C12orf65
homolog, mitochondrial isoform 6 [Gorilla gorilla
gorilla]
Length = 166
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/42 (57%), Positives = 33/42 (78%)
Query: 21 DYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
DY + +DE +++E+FV+G GPGGQA KT+NCVVL HIP+
Sbjct: 48 DYPALLSLDENELEEQFVKGHGPGGQATNKTSNCVVLKHIPS 89
>gi|332254315|ref|XP_003276272.1| PREDICTED: probable peptide chain release factor C12orf65
homolog, mitochondrial isoform 1 [Nomascus leucogenys]
gi|332254317|ref|XP_003276273.1| PREDICTED: probable peptide chain release factor C12orf65
homolog, mitochondrial isoform 2 [Nomascus leucogenys]
gi|332254319|ref|XP_003276274.1| PREDICTED: probable peptide chain release factor C12orf65
homolog, mitochondrial isoform 3 [Nomascus leucogenys]
gi|332254321|ref|XP_003276275.1| PREDICTED: probable peptide chain release factor C12orf65
homolog, mitochondrial isoform 4 [Nomascus leucogenys]
gi|441630234|ref|XP_004089518.1| PREDICTED: probable peptide chain release factor C12orf65
homolog, mitochondrial [Nomascus leucogenys]
gi|441630241|ref|XP_004089519.1| PREDICTED: probable peptide chain release factor C12orf65
homolog, mitochondrial [Nomascus leucogenys]
Length = 166
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/42 (57%), Positives = 33/42 (78%)
Query: 21 DYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
DY + +DE +++E+FV+G GPGGQA KT+NCVVL HIP+
Sbjct: 48 DYPALLSLDENELEEQFVKGHGPGGQATNKTSNCVVLKHIPS 89
>gi|22748627|ref|NP_689482.1| probable peptide chain release factor C12orf65, mitochondrial
[Homo sapiens]
gi|219879802|ref|NP_001137377.1| probable peptide chain release factor C12orf65, mitochondrial
[Homo sapiens]
gi|303304971|ref|NP_001181924.1| probable peptide chain release factor C12orf65, mitochondrial
[Homo sapiens]
gi|74733574|sp|Q9H3J6.1|CL065_HUMAN RecName: Full=Probable peptide chain release factor C12orf65,
mitochondrial; Flags: Precursor
gi|12002002|gb|AAG43144.1|AF061733_1 My030 protein [Homo sapiens]
gi|17390320|gb|AAH18145.1| Chromosome 12 open reading frame 65 [Homo sapiens]
gi|21755354|dbj|BAC04665.1| unnamed protein product [Homo sapiens]
gi|38382804|gb|AAH62329.1| Chromosome 12 open reading frame 65 [Homo sapiens]
gi|119618802|gb|EAW98396.1| hypothetical protein FLJ38663, isoform CRA_b [Homo sapiens]
gi|312152346|gb|ADQ32685.1| chromosome 12 open reading frame 65 [synthetic construct]
Length = 166
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/42 (57%), Positives = 33/42 (78%)
Query: 21 DYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
DY + +DE +++E+FV+G GPGGQA KT+NCVVL HIP+
Sbjct: 48 DYPALLSLDENELEEQFVKGHGPGGQATNKTSNCVVLKHIPS 89
>gi|403281775|ref|XP_003932353.1| PREDICTED: probable peptide chain release factor C12orf65
homolog, mitochondrial [Saimiri boliviensis
boliviensis]
Length = 170
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/42 (57%), Positives = 33/42 (78%)
Query: 21 DYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
DY + +DE +++E+FV+G GPGGQA KT+NCVVL HIP+
Sbjct: 48 DYPALLSLDENELEEQFVKGHGPGGQATNKTSNCVVLKHIPS 89
>gi|296213216|ref|XP_002753183.1| PREDICTED: probable peptide chain release factor C12orf65,
mitochondrial [Callithrix jacchus]
Length = 170
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/42 (57%), Positives = 33/42 (78%)
Query: 21 DYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
DY + +DE +++E+FV+G GPGGQA KT+NCVVL HIP+
Sbjct: 48 DYPALLSLDENELEEQFVKGHGPGGQATNKTSNCVVLKHIPS 89
>gi|73995153|ref|XP_543374.2| PREDICTED: uncharacterized protein LOC486249 [Canis lupus
familiaris]
Length = 440
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/42 (57%), Positives = 33/42 (78%)
Query: 21 DYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
D +P +DE +++E+FV+G GPGGQA KT+NCVVL HIP+
Sbjct: 322 DRPALPLLDESELEEQFVKGHGPGGQATNKTSNCVVLKHIPS 363
>gi|18089197|gb|AAH20885.1| C12orf65 protein [Homo sapiens]
gi|119618801|gb|EAW98395.1| hypothetical protein FLJ38663, isoform CRA_a [Homo sapiens]
Length = 119
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/42 (57%), Positives = 33/42 (78%)
Query: 21 DYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
DY + +DE +++E+FV+G GPGGQA KT+NCVVL HIP+
Sbjct: 48 DYPALLSLDENELEEQFVKGHGPGGQATNKTSNCVVLKHIPS 89
>gi|297693340|ref|XP_002823976.1| PREDICTED: probable peptide chain release factor C12orf65
homolog, mitochondrial isoform 3 [Pongo abelii]
gi|297693344|ref|XP_002823978.1| PREDICTED: probable peptide chain release factor C12orf65
homolog, mitochondrial isoform 5 [Pongo abelii]
Length = 166
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 24/42 (57%), Positives = 33/42 (78%)
Query: 21 DYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
DY + +DE +++E+FV+G GPGGQA KT+NCVVL HIP+
Sbjct: 48 DYPALLYLDENELEEQFVKGHGPGGQATNKTSNCVVLKHIPS 89
>gi|291239031|ref|XP_002739431.1| PREDICTED: C12orf65 homolog [Saccoglossus kowalevskii]
Length = 160
Score = 58.9 bits (141), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 24/36 (66%), Positives = 31/36 (86%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+I+E ++ E+FVRGSGPGGQA KT+NCVVL HIP+
Sbjct: 50 EINEDELDEQFVRGSGPGGQATNKTSNCVVLKHIPS 85
>gi|195426674|ref|XP_002061432.1| GK20726 [Drosophila willistoni]
gi|194157517|gb|EDW72418.1| GK20726 [Drosophila willistoni]
Length = 167
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 24/34 (70%), Positives = 29/34 (85%)
Query: 30 EKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTD 63
E DI+E F+RGSGPGGQAV KT+NCV L H+PT+
Sbjct: 57 ESDIEETFMRGSGPGGQAVNKTSNCVFLRHLPTN 90
>gi|403172972|ref|XP_003332081.2| hypothetical protein PGTG_13448 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375170075|gb|EFP87662.2| hypothetical protein PGTG_13448 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 110
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/38 (65%), Positives = 30/38 (78%)
Query: 25 VPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+P +DE ++ E+FVRGSGPGGQAV KTNN V L H PT
Sbjct: 35 IPPLDENELIEQFVRGSGPGGQAVNKTNNAVSLIHKPT 72
>gi|344258847|gb|EGW14951.1| Uncharacterized protein C12orf65-like [Cricetulus griseus]
Length = 101
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 23/42 (54%), Positives = 32/42 (76%)
Query: 21 DYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
DY + + E +++E+FV+G GPGGQA KTNNCVVL H+P+
Sbjct: 47 DYPALLPLHESELEEQFVKGHGPGGQATNKTNNCVVLKHVPS 88
>gi|405957865|gb|EKC24043.1| Uncharacterized protein C12orf65-like protein [Crassostrea gigas]
Length = 372
Score = 58.5 bits (140), Expect = 5e-07, Method: Composition-based stats.
Identities = 24/39 (61%), Positives = 32/39 (82%)
Query: 24 KVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
K P+I E+D++E V+GSGPGGQ+V KT+NCVVL H P+
Sbjct: 48 KFPEILERDLEESIVKGSGPGGQSVNKTSNCVVLLHKPS 86
>gi|344297379|ref|XP_003420376.1| PREDICTED: hypothetical protein LOC100663086 [Loxodonta africana]
Length = 377
Score = 58.5 bits (140), Expect = 5e-07, Method: Composition-based stats.
Identities = 23/38 (60%), Positives = 32/38 (84%)
Query: 25 VPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+P +DE +++E+FV+G GPGGQA KT+NCVVL HIP+
Sbjct: 263 LPALDESELEEQFVKGHGPGGQATNKTSNCVVLKHIPS 300
>gi|327276060|ref|XP_003222789.1| PREDICTED: probable peptide chain release factor C12orf65,
mitochondrial-like [Anolis carolinensis]
Length = 197
Score = 58.2 bits (139), Expect = 6e-07, Method: Composition-based stats.
Identities = 23/35 (65%), Positives = 31/35 (88%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
++E D++E+FVRGSGPGGQA KT+NCVVL H+P+
Sbjct: 88 LNEADLEEQFVRGSGPGGQATNKTSNCVVLKHLPS 122
>gi|354496365|ref|XP_003510297.1| PREDICTED: probable peptide chain release factor C12orf65
homolog, mitochondrial-like [Cricetulus griseus]
Length = 180
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 23/42 (54%), Positives = 32/42 (76%)
Query: 21 DYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
DY + + E +++E+FV+G GPGGQA KTNNCVVL H+P+
Sbjct: 47 DYPALLPLHESELEEQFVKGHGPGGQATNKTNNCVVLKHVPS 88
>gi|351698556|gb|EHB01475.1| hypothetical protein GW7_03140 [Heterocephalus glaber]
Length = 186
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 22/42 (52%), Positives = 34/42 (80%)
Query: 21 DYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
D++ + +DE +++E+FV+G GPGGQA KT+NCVVL H+P+
Sbjct: 51 DHTSLLPLDESELEEQFVKGHGPGGQATNKTSNCVVLKHLPS 92
>gi|33859720|ref|NP_082586.1| probable peptide chain release factor C12orf65 homolog,
mitochondrial isoform b [Mus musculus]
gi|26333153|dbj|BAC30294.1| unnamed protein product [Mus musculus]
gi|148687648|gb|EDL19595.1| RIKEN cDNA 2810006K23, isoform CRA_a [Mus musculus]
Length = 128
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 22/42 (52%), Positives = 33/42 (78%)
Query: 21 DYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
DY + ++E +++E+FV+G GPGGQA KT+NCVVL H+P+
Sbjct: 51 DYPALLPLNESELEEQFVKGHGPGGQATNKTSNCVVLKHVPS 92
>gi|406909990|gb|EKD50121.1| peptide chain release factor [uncultured bacterium]
Length = 192
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 28/35 (80%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
IDEKDI ERF+RGSG GGQ + KT+NCV L H PT
Sbjct: 94 IDEKDIIERFIRGSGKGGQKINKTSNCVQLVHTPT 128
>gi|74180243|dbj|BAE24439.1| unnamed protein product [Mus musculus]
Length = 152
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/42 (52%), Positives = 33/42 (78%)
Query: 21 DYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
DY + ++E +++E+FV+G GPGGQA KT+NCVVL H+P+
Sbjct: 51 DYPALLPLNESELEEQFVKGHGPGGQATNKTSNCVVLKHVPS 92
>gi|197927088|ref|NP_001102535.2| uncharacterized protein LOC498179 [Rattus norvegicus]
gi|392352516|ref|XP_003751231.1| PREDICTED: probable peptide chain release factor C12orf65
homolog, mitochondrial-like [Rattus norvegicus]
gi|195539878|gb|AAI68187.1| RGD1563482 protein [Rattus norvegicus]
Length = 181
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/42 (52%), Positives = 33/42 (78%)
Query: 21 DYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
DY + ++E +++E+FV+G GPGGQA KT+NCVVL H+P+
Sbjct: 48 DYPALLPLNESELEEQFVKGHGPGGQATNKTSNCVVLKHVPS 89
>gi|393245369|gb|EJD52879.1| hypothetical protein AURDEDRAFT_157434 [Auricularia delicata
TFB-10046 SS5]
Length = 328
Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 25/38 (65%), Positives = 30/38 (78%)
Query: 25 VPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
VP ++E D+ E FVRGSGPGGQ++ KT NCV LTH PT
Sbjct: 185 VPTLNEDDLDEAFVRGSGPGGQSINKTRNCVQLTHRPT 222
>gi|334327146|ref|XP_001375022.2| PREDICTED: probable peptide chain release factor C12orf65
homolog, mitochondrial-like [Monodelphis domestica]
Length = 138
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/35 (62%), Positives = 31/35 (88%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
++E+D++E+FV+G GPGGQA KT+NCVVL HIP+
Sbjct: 20 LNERDLEEQFVKGHGPGGQATNKTSNCVVLKHIPS 54
>gi|449279303|gb|EMC86938.1| hypothetical protein A306_04532 [Columba livia]
Length = 162
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/35 (65%), Positives = 29/35 (82%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+ E +++E+FVRG GPGGQA KTNNCVVL HIP+
Sbjct: 53 LTEAELKEQFVRGDGPGGQATNKTNNCVVLKHIPS 87
>gi|74198326|dbj|BAB28408.3| unnamed protein product [Mus musculus]
Length = 142
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/42 (52%), Positives = 33/42 (78%)
Query: 21 DYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
DY + ++E +++E+FV+G GPGGQA KT+NCVVL H+P+
Sbjct: 51 DYPALLPLNESELEEQFVKGHGPGGQATNKTSNCVVLKHVPS 92
>gi|197927090|ref|NP_001128189.1| probable peptide chain release factor C12orf65 homolog,
mitochondrial isoform a [Mus musculus]
gi|81895172|sp|Q80VP5.1|CL065_MOUSE RecName: Full=Probable peptide chain release factor C12orf65
homolog, mitochondrial; Flags: Precursor
gi|28422444|gb|AAH46909.1| RIKEN cDNA 2810006K23 gene [Mus musculus]
gi|148687649|gb|EDL19596.1| RIKEN cDNA 2810006K23, isoform CRA_b [Mus musculus]
Length = 184
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/42 (52%), Positives = 33/42 (78%)
Query: 21 DYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
DY + ++E +++E+FV+G GPGGQA KT+NCVVL H+P+
Sbjct: 51 DYPALLPLNESELEEQFVKGHGPGGQATNKTSNCVVLKHVPS 92
>gi|440898325|gb|ELR49850.1| hypothetical protein M91_19035, partial [Bos grunniens mutus]
Length = 165
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 21/35 (60%), Positives = 31/35 (88%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+DE++++E+FV+G GPGGQA KT+NCVVL H+P+
Sbjct: 55 LDERELEEQFVKGHGPGGQATNKTSNCVVLRHVPS 89
>gi|332375198|gb|AEE62740.1| unknown [Dendroctonus ponderosae]
Length = 139
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 38/60 (63%), Gaps = 5/60 (8%)
Query: 8 LSLASSLFRKY-----DLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
LS S+ R Y +D + P +DE D++E+ +RGSGPGG ++ T +CV+L HIPT
Sbjct: 7 LSYTRSIVRWYSSMRKQIDLTCFPTLDECDLEEQHIRGSGPGGSKISTTCSCVLLKHIPT 66
>gi|400260483|pdb|2RSM|A Chain A, Solution Structure And Sirna-Mediated Knockdown Analysis
Of The Mitochondrial Disease-Related Protein C12orf65
(Ict2)
Length = 115
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/42 (52%), Positives = 33/42 (78%)
Query: 21 DYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
DY + ++E +++E+FV+G GPGGQA KT+NCVVL H+P+
Sbjct: 36 DYPALLPLNESELEEQFVKGHGPGGQATNKTSNCVVLKHVPS 77
>gi|149063270|gb|EDM13593.1| rCG21417, isoform CRA_a [Rattus norvegicus]
Length = 220
Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 22/42 (52%), Positives = 33/42 (78%)
Query: 21 DYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
DY + ++E +++E+FV+G GPGGQA KT+NCVVL H+P+
Sbjct: 87 DYPALLPLNESELEEQFVKGHGPGGQATNKTSNCVVLKHVPS 128
>gi|61886963|ref|XP_584238.1| PREDICTED: uncharacterized protein LOC507595 [Bos taurus]
gi|297484729|ref|XP_002694521.1| PREDICTED: uncharacterized protein LOC507595 [Bos taurus]
gi|296478551|tpg|DAA20666.1| TPA: chromosome 12 open reading frame 65 ortholog [Bos taurus]
Length = 172
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 21/35 (60%), Positives = 31/35 (88%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+DE++++E+FV+G GPGGQA KT+NCVVL H+P+
Sbjct: 55 LDERELEEQFVKGHGPGGQATNKTSNCVVLRHVPS 89
>gi|431912146|gb|ELK14284.1| hypothetical protein PAL_GLEAN10008800 [Pteropus alecto]
Length = 169
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/35 (62%), Positives = 30/35 (85%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+DE +++E+FV+G GPGGQA KT+NCVVL HIP+
Sbjct: 40 LDESELEEQFVKGHGPGGQATNKTSNCVVLKHIPS 74
>gi|406695093|gb|EKC98408.1| hypothetical protein A1Q2_07422 [Trichosporon asahii var. asahii
CBS 8904]
Length = 260
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 24/43 (55%), Positives = 32/43 (74%)
Query: 20 LDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
L +VP +DE +++E+FVRG GPGGQA+ KTN+ V L H PT
Sbjct: 114 LSRHQVPDLDESELEEKFVRGRGPGGQAINKTNSSVSLLHKPT 156
>gi|196010673|ref|XP_002115201.1| hypothetical protein TRIADDRAFT_28629 [Trichoplax adhaerens]
gi|190582584|gb|EDV22657.1| hypothetical protein TRIADDRAFT_28629 [Trichoplax adhaerens]
Length = 125
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/42 (57%), Positives = 31/42 (73%)
Query: 21 DYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+Y +I KDI+E FV+GSGPGGQ V K++NCV+L H PT
Sbjct: 14 NYYAQSQIPTKDIEESFVKGSGPGGQKVNKSSNCVILKHKPT 55
>gi|154757477|gb|AAI51776.1| C17H12ORF65 protein [Bos taurus]
Length = 143
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 21/35 (60%), Positives = 31/35 (88%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+DE++++E+FV+G GPGGQA KT+NCVVL H+P+
Sbjct: 55 LDERELEEQFVKGHGPGGQATNKTSNCVVLRHVPS 89
>gi|409082683|gb|EKM83041.1| hypothetical protein AGABI1DRAFT_111562, partial [Agaricus bisporus
var. burnettii JB137-S8]
Length = 263
Score = 56.2 bits (134), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/38 (63%), Positives = 30/38 (78%)
Query: 25 VPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
VP++ E+D++E FVRGSGPGGQ+V KT N V L H PT
Sbjct: 160 VPELREEDLEESFVRGSGPGGQSVNKTENNVQLLHKPT 197
>gi|401885354|gb|EJT49473.1| hypothetical protein A1Q1_01377 [Trichosporon asahii var. asahii
CBS 2479]
Length = 232
Score = 56.2 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 23/38 (60%), Positives = 30/38 (78%)
Query: 25 VPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
VP +DE +++E+FVRG GPGGQA+ KTN+ V L H PT
Sbjct: 91 VPDLDESELEEKFVRGRGPGGQAINKTNSSVSLLHKPT 128
>gi|395330192|gb|EJF62576.1| hypothetical protein DICSQDRAFT_57884 [Dichomitus squalens LYAD-421
SS1]
Length = 280
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/38 (60%), Positives = 30/38 (78%)
Query: 25 VPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+P++ E+D++E FVRGSGPGGQ+V KT N V L H PT
Sbjct: 164 LPELKEEDLEESFVRGSGPGGQSVNKTENNVQLLHKPT 201
>gi|417396497|gb|JAA45282.1| Putative mitochondrial polypeptide chain release factor [Desmodus
rotundus]
Length = 171
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/42 (52%), Positives = 33/42 (78%)
Query: 21 DYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
D+ + +DE +++E+FV+G GPGGQA KT+NCVVL H+P+
Sbjct: 45 DHPVLLPLDEGELEEQFVKGHGPGGQATNKTSNCVVLKHVPS 86
>gi|326929619|ref|XP_003210956.1| PREDICTED: probable peptide chain release factor C12orf65,
mitochondrial-like [Meleagris gallopavo]
Length = 165
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 32/39 (82%)
Query: 24 KVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
++ ++ E +++E+FVRG GPGGQA KT+NCVVL H+P+
Sbjct: 52 QLVQLTEAELKEQFVRGDGPGGQATNKTSNCVVLKHVPS 90
>gi|242223756|ref|XP_002477455.1| predicted protein [Postia placenta Mad-698-R]
gi|220722947|gb|EED77345.1| predicted protein [Postia placenta Mad-698-R]
Length = 275
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/38 (60%), Positives = 30/38 (78%)
Query: 25 VPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
VP++ E+D++E FVRGSGPGGQ++ KT N V L H PT
Sbjct: 164 VPELKEEDLEEAFVRGSGPGGQSINKTENNVQLLHKPT 201
>gi|355390285|ref|NP_001239017.1| probable peptide chain release factor C12orf65, mitochondrial
[Gallus gallus]
Length = 164
Score = 55.8 bits (133), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 21/36 (58%), Positives = 30/36 (83%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
++ E +++E+FVRG GPGGQA KT+NCVVL H+P+
Sbjct: 52 ELTEAELKEQFVRGDGPGGQATNKTSNCVVLKHVPS 87
>gi|194042870|ref|XP_001928322.1| PREDICTED: probable peptide chain release factor C12orf65,
mitochondrial-like [Sus scrofa]
Length = 202
Score = 55.5 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 23/42 (54%), Positives = 33/42 (78%)
Query: 21 DYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
D + +DE++++E+FV+G GPGGQA KT+NCVVL HIP+
Sbjct: 48 DRPALLSLDERELEEQFVKGHGPGGQATNKTSNCVVLRHIPS 89
>gi|389749198|gb|EIM90375.1| hypothetical protein STEHIDRAFT_154200 [Stereum hirsutum FP-91666
SS1]
Length = 270
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/38 (60%), Positives = 29/38 (76%)
Query: 25 VPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+P++ E D++E FVRGSGPGGQ+V KT N V L H PT
Sbjct: 162 IPELKESDLEENFVRGSGPGGQSVNKTENNVQLLHKPT 199
>gi|345323062|ref|XP_001507092.2| PREDICTED: probable peptide chain release factor C12orf65,
mitochondrial-like [Ornithorhynchus anatinus]
Length = 173
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 21/35 (60%), Positives = 30/35 (85%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
++E +++E+FV+G GPGGQA KT+NCVVL HIP+
Sbjct: 55 LNESELEEQFVKGHGPGGQATNKTSNCVVLKHIPS 89
>gi|298713472|emb|CBJ27027.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 191
Score = 55.5 bits (132), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 21/33 (63%), Positives = 28/33 (84%)
Query: 30 EKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
++DI+ERFV+GSGPGGQ + K NCV LTH+P+
Sbjct: 39 DEDIEERFVKGSGPGGQKINKVRNCVQLTHVPS 71
>gi|242214518|ref|XP_002473081.1| predicted protein [Postia placenta Mad-698-R]
gi|220727819|gb|EED81727.1| predicted protein [Postia placenta Mad-698-R]
Length = 268
Score = 55.5 bits (132), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 23/38 (60%), Positives = 30/38 (78%)
Query: 25 VPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
VP++ E+D++E FVRGSGPGGQ++ KT N V L H PT
Sbjct: 159 VPELKEEDLEEAFVRGSGPGGQSINKTENNVQLLHKPT 196
>gi|187736226|ref|YP_001878338.1| peptide chain release factor [Akkermansia muciniphila ATCC
BAA-835]
gi|187426278|gb|ACD05557.1| peptide chain release factor [Akkermansia muciniphila ATCC
BAA-835]
Length = 120
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/35 (68%), Positives = 27/35 (77%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
I E+D++E FVRGSG GGQ V KTNNCV L H PT
Sbjct: 19 IREQDLEESFVRGSGRGGQKVNKTNNCVYLRHTPT 53
>gi|302690942|ref|XP_003035150.1| hypothetical protein SCHCODRAFT_52216 [Schizophyllum commune H4-8]
gi|300108846|gb|EFJ00248.1| hypothetical protein SCHCODRAFT_52216 [Schizophyllum commune H4-8]
Length = 257
Score = 55.1 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 25/39 (64%), Positives = 31/39 (79%)
Query: 24 KVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
KVP++ E+D++E FVRGSGPGGQA+ KT N V L H PT
Sbjct: 149 KVPELREEDLEESFVRGSGPGGQAINKTANNVQLVHKPT 187
>gi|118396926|ref|XP_001030799.1| Peptidyl-tRNA hydrolase domain containing protein [Tetrahymena
thermophila]
gi|89285114|gb|EAR83136.1| Peptidyl-tRNA hydrolase domain containing protein [Tetrahymena
thermophila SB210]
Length = 636
Score = 55.1 bits (131), Expect = 6e-06, Method: Composition-based stats.
Identities = 24/37 (64%), Positives = 31/37 (83%)
Query: 26 PKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
P+IDEKD++ +FV+GSGPGGQ+V KT+N VL H PT
Sbjct: 520 PQIDEKDLEWKFVKGSGPGGQSVNKTSNNAVLIHKPT 556
>gi|321255196|ref|XP_003193341.1| hypothetical protein CGB_D1860W [Cryptococcus gattii WM276]
gi|317459811|gb|ADV21554.1| Hypothetical protein CGB_D1860W [Cryptococcus gattii WM276]
Length = 316
Score = 54.7 bits (130), Expect = 6e-06, Method: Composition-based stats.
Identities = 24/36 (66%), Positives = 30/36 (83%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+I E +++ERFVRG GPGGQA+ KTN+ V LTHIPT
Sbjct: 127 EIPEDELEERFVRGRGPGGQAINKTNSSVSLTHIPT 162
>gi|339237345|ref|XP_003380227.1| nicotinamide phosphoribosyltransferase [Trichinella spiralis]
gi|316976972|gb|EFV60157.1| nicotinamide phosphoribosyltransferase [Trichinella spiralis]
Length = 544
Score = 54.7 bits (130), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 37/58 (63%), Gaps = 4/58 (6%)
Query: 8 LSLASSLFRKYDL---DYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+SL +F++ + DY P ++E D++E+FV G GPGGQ V K NCV L H+PT
Sbjct: 392 ISLLGGIFQRCSISRKDYP-FPPLEEPDLEEKFVSGHGPGGQNVNKRQNCVFLRHVPT 448
>gi|164655297|ref|XP_001728779.1| hypothetical protein MGL_4114 [Malassezia globosa CBS 7966]
gi|159102663|gb|EDP41565.1| hypothetical protein MGL_4114 [Malassezia globosa CBS 7966]
Length = 248
Score = 54.7 bits (130), Expect = 7e-06, Method: Composition-based stats.
Identities = 25/42 (59%), Positives = 33/42 (78%), Gaps = 1/42 (2%)
Query: 24 KVP-KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTDS 64
K+P +DE+DI+ERF+RGSGPGGQA+ K + V L HIPT +
Sbjct: 125 KMPIDLDERDIRERFIRGSGPGGQAINKLSTNVELVHIPTST 166
>gi|71022895|ref|XP_761677.1| hypothetical protein UM05530.1 [Ustilago maydis 521]
gi|46101154|gb|EAK86387.1| hypothetical protein UM05530.1 [Ustilago maydis 521]
Length = 713
Score = 54.7 bits (130), Expect = 7e-06, Method: Composition-based stats.
Identities = 26/49 (53%), Positives = 34/49 (69%), Gaps = 6/49 (12%)
Query: 16 RKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTDS 64
RKY L +DEKD+ E+F+RGSGPGGQA+ K + V LTH+PT +
Sbjct: 594 RKYPL------TLDEKDLAEKFIRGSGPGGQAINKLSTNVQLTHLPTGT 636
>gi|409046443|gb|EKM55923.1| hypothetical protein PHACADRAFT_93577 [Phanerochaete carnosa
HHB-10118-sp]
Length = 278
Score = 54.3 bits (129), Expect = 9e-06, Method: Composition-based stats.
Identities = 23/39 (58%), Positives = 31/39 (79%)
Query: 24 KVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
K+P++ E+DI+E FVRGSGPGGQ++ KT N V L H P+
Sbjct: 162 KIPELKEEDIEETFVRGSGPGGQSINKTENNVQLVHKPS 200
>gi|426247198|ref|XP_004017373.1| PREDICTED: probable peptide chain release factor C12orf65
homolog, mitochondrial [Ovis aries]
Length = 177
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 30/35 (85%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
++E +++E+FV+G GPGGQA KT+NCVVL H+P+
Sbjct: 55 LNEHELEEQFVKGHGPGGQATNKTSNCVVLRHVPS 89
>gi|402225296|gb|EJU05357.1| hypothetical protein DACRYDRAFT_92714 [Dacryopinax sp. DJM-731 SS1]
Length = 263
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 22/39 (56%), Positives = 31/39 (79%)
Query: 24 KVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
++P + +D++E FVRGSGPGGQA+ KT++CV L H PT
Sbjct: 142 ELPVLKAEDLEESFVRGSGPGGQAINKTSSCVSLIHRPT 180
>gi|134115677|ref|XP_773552.1| hypothetical protein CNBI1660 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50256178|gb|EAL18905.1| hypothetical protein CNBI1660 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 315
Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 23/36 (63%), Positives = 30/36 (83%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+I E +++ERFV+G GPGGQA+ KTN+ V LTHIPT
Sbjct: 126 EIPEDELEERFVKGRGPGGQAINKTNSSVSLTHIPT 161
>gi|336367117|gb|EGN95462.1| hypothetical protein SERLA73DRAFT_186477 [Serpula lacrymans var.
lacrymans S7.3]
gi|336379836|gb|EGO20990.1| hypothetical protein SERLADRAFT_475544 [Serpula lacrymans var.
lacrymans S7.9]
Length = 266
Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 23/39 (58%), Positives = 31/39 (79%)
Query: 24 KVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
K+P++ E+DI+E FVRGSGPGGQ++ KT N V + H PT
Sbjct: 156 KIPELREEDIEESFVRGSGPGGQSINKTENNVQIIHKPT 194
>gi|405119599|gb|AFR94371.1| hypothetical protein CNAG_05106 [Cryptococcus neoformans var.
grubii H99]
Length = 315
Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 23/36 (63%), Positives = 30/36 (83%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+I E +++ERFV+G GPGGQA+ KTN+ V LTHIPT
Sbjct: 126 EIAEDELEERFVKGRGPGGQAINKTNSSVSLTHIPT 161
>gi|452825605|gb|EME32601.1| bacterial peptide chain release factor-like protein [Galdieria
sulphuraria]
Length = 223
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/36 (55%), Positives = 29/36 (80%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
++ E+D+ E+F+RG GPGGQ++ KT +CVVL H PT
Sbjct: 98 ELREQDLDEKFIRGGGPGGQSINKTESCVVLVHKPT 133
>gi|403416990|emb|CCM03690.1| predicted protein [Fibroporia radiculosa]
Length = 1597
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/38 (60%), Positives = 29/38 (76%)
Query: 25 VPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
VP++ E D++E FVRGSGPGGQ++ KT N V L H PT
Sbjct: 155 VPQLKEVDLEESFVRGSGPGGQSINKTENNVQLLHKPT 192
>gi|443925843|gb|ELU44604.1| RF-1 domain-containing protein [Rhizoctonia solani AG-1 IA]
Length = 266
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/38 (57%), Positives = 31/38 (81%)
Query: 25 VPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+P++ E+D++E FVRGSGPGGQA+ KT++ V L H PT
Sbjct: 136 IPELREEDLEEMFVRGSGPGGQAINKTSSSVSLIHRPT 173
>gi|443898234|dbj|GAC75571.1| hypothetical protein PANT_16d00044 [Pseudozyma antarctica T-34]
Length = 412
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 26/49 (53%), Positives = 34/49 (69%), Gaps = 6/49 (12%)
Query: 16 RKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTDS 64
RKY L +DE+D+ E+FVRGSGPGGQA+ K + V LTH+PT +
Sbjct: 297 RKYPL------TLDERDLAEKFVRGSGPGGQAINKLSTNVQLTHLPTGT 339
>gi|388856138|emb|CCF50318.1| uncharacterized protein [Ustilago hordei]
Length = 422
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 26/49 (53%), Positives = 34/49 (69%), Gaps = 6/49 (12%)
Query: 16 RKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTDS 64
RKY L +DEKD+ E+F+RGSGPGGQA+ K + V L+HIPT +
Sbjct: 306 RKYPL------TLDEKDLAEKFIRGSGPGGQAINKLSTNVQLSHIPTGT 348
>gi|440801524|gb|ELR22542.1| peptidyltRNA hydrolase domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 327
Score = 52.8 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 19/41 (46%), Positives = 31/41 (75%)
Query: 22 YSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+ K ++ E +++E+F++G GPGGQ + KTN+CV L H+PT
Sbjct: 77 FEKTRQVAESELEEKFIKGGGPGGQKINKTNSCVYLKHLPT 117
>gi|392595661|gb|EIW84984.1| hypothetical protein CONPUDRAFT_87482 [Coniophora puteana
RWD-64-598 SS2]
Length = 263
Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 24/38 (63%), Positives = 30/38 (78%)
Query: 25 VPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
VP++ E+DI+E FVRGSGPGGQ++ KT N V L H PT
Sbjct: 152 VPELKEEDIEESFVRGSGPGGQSINKTENNVQLLHKPT 189
>gi|169854029|ref|XP_001833692.1| hypothetical protein CC1G_03909 [Coprinopsis cinerea okayama7#130]
gi|116505342|gb|EAU88237.1| hypothetical protein CC1G_03909 [Coprinopsis cinerea okayama7#130]
Length = 264
Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 23/38 (60%), Positives = 30/38 (78%)
Query: 25 VPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
VP++ E+D++E FVRGSGPGGQ++ KT N V L H PT
Sbjct: 155 VPELKEEDLEESFVRGSGPGGQSINKTENNVQLLHKPT 192
>gi|343426408|emb|CBQ69938.1| conserved hypothetical protein [Sporisorium reilianum SRZ2]
Length = 415
Score = 52.4 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 21/37 (56%), Positives = 30/37 (81%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTDS 64
+DE+D+ E+F+RGSGPGGQA+ K + V LTH+PT +
Sbjct: 301 LDERDLAEKFIRGSGPGGQAINKLSTNVQLTHLPTGT 337
>gi|392567655|gb|EIW60830.1| hypothetical protein TRAVEDRAFT_36415 [Trametes versicolor
FP-101664 SS1]
Length = 277
Score = 52.4 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 24/38 (63%), Positives = 29/38 (76%)
Query: 25 VPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
VP++ E D++E FVRGSGPGGQ+V KT N V L H PT
Sbjct: 161 VPELKEADLEESFVRGSGPGGQSVNKTENNVQLLHKPT 198
>gi|219111103|ref|XP_002177303.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217411838|gb|EEC51766.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 491
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/39 (56%), Positives = 29/39 (74%)
Query: 24 KVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
++P+++E D+ E FVRGSGPGGQ KT+N V L H PT
Sbjct: 384 ELPELNEDDLTETFVRGSGPGGQKTNKTSNKVALLHGPT 422
>gi|392577361|gb|EIW70490.1| hypothetical protein TREMEDRAFT_60995 [Tremella mesenterica DSM
1558]
Length = 146
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 21/36 (58%), Positives = 28/36 (77%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+I E D++ERF +G GPGGQA+ KTN+ V L H+PT
Sbjct: 2 EIPESDLEERFDKGRGPGGQAINKTNSAVSLIHLPT 37
>gi|390598412|gb|EIN07810.1| hypothetical protein PUNSTDRAFT_88482, partial [Punctularia
strigosozonata HHB-11173 SS5]
Length = 246
Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 23/37 (62%), Positives = 29/37 (78%)
Query: 26 PKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
P++ E+D++E FVRG GPGGQA+ KTNN V L H PT
Sbjct: 152 PELREEDLEESFVRGHGPGGQAINKTNNNVQLIHKPT 188
>gi|406968596|gb|EKD93410.1| Class I peptide chain release factor [uncultured bacterium]
Length = 138
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/38 (57%), Positives = 30/38 (78%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTDS 64
KI +DI E+FVRGSG GGQ + KT++CVVL H+P+ +
Sbjct: 19 KILPEDISEQFVRGSGAGGQKINKTSSCVVLKHLPSGT 56
>gi|170094760|ref|XP_001878601.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164647055|gb|EDR11300.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 294
Score = 52.0 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 26/50 (52%), Positives = 35/50 (70%), Gaps = 1/50 (2%)
Query: 13 SLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
S +K L S +P++ E+D++E FVRGSGPGGQ++ KT N V L H PT
Sbjct: 172 SALKKAHLQRS-IPELREEDLEETFVRGSGPGGQSINKTENNVQLLHKPT 220
>gi|449019728|dbj|BAM83130.1| similar to bacterial peptide chain release factor [Cyanidioschyzon
merolae strain 10D]
Length = 205
Score = 52.0 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 20/36 (55%), Positives = 29/36 (80%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+++E D++E FV+G GPGGQ V KT++CV+L H PT
Sbjct: 98 ELNEADLEETFVKGGGPGGQKVNKTSSCVILRHTPT 133
>gi|50545671|ref|XP_500374.1| YALI0B01144p [Yarrowia lipolytica]
gi|49646240|emb|CAG82589.1| YALI0B01144p [Yarrowia lipolytica CLIB122]
Length = 154
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 28/37 (75%)
Query: 26 PKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
PK+DE +I+E F+RGSGPGGQ + + + +THIPT
Sbjct: 26 PKVDENEIRESFIRGSGPGGQCINRRSTRCQITHIPT 62
>gi|393220459|gb|EJD05945.1| hypothetical protein FOMMEDRAFT_145291 [Fomitiporia mediterranea
MF3/22]
Length = 299
Score = 51.6 bits (122), Expect = 7e-05, Method: Composition-based stats.
Identities = 22/37 (59%), Positives = 30/37 (81%)
Query: 26 PKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
P+++E D++E FVRGSGPGGQ++ KT+N V L H PT
Sbjct: 189 PELNEADLEESFVRGSGPGGQSINKTSNNVQLLHKPT 225
>gi|171914371|ref|ZP_02929841.1| Class I peptide chain release factor [Verrucomicrobium spinosum
DSM 4136]
Length = 141
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 29/35 (82%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
I E+D++E F+RG+G GGQ + KT++ VVLTH+PT
Sbjct: 24 IREEDLEETFIRGTGAGGQKINKTSSTVVLTHVPT 58
>gi|449543486|gb|EMD34462.1| hypothetical protein CERSUDRAFT_117318, partial [Ceriporiopsis
subvermispora B]
Length = 224
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 22/39 (56%), Positives = 31/39 (79%)
Query: 24 KVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
++P++ E+DI+E FVRGSGPGGQ++ KT N V L H P+
Sbjct: 109 QIPELREEDIEETFVRGSGPGGQSINKTENNVQLLHKPS 147
>gi|449683013|ref|XP_002163246.2| PREDICTED: probable peptide chain release factor C12orf65
homolog, mitochondrial-like, partial [Hydra
magnipapillata]
Length = 132
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 26/35 (74%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+ E D QE+F++GSGPGGQ + KT+NCV L H T
Sbjct: 29 LKESDFQEKFIKGSGPGGQKINKTSNCVELKHDAT 63
>gi|449300516|gb|EMC96528.1| hypothetical protein BAUCODRAFT_47992, partial [Baudoinia
compniacensis UAMH 10762]
Length = 111
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 28/37 (75%)
Query: 26 PKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
PKI E DI E F++GSGPGGQ + KT++ V + HIPT
Sbjct: 6 PKIVETDITESFLKGSGPGGQKINKTSSAVQIKHIPT 42
>gi|145550427|ref|XP_001460892.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124428723|emb|CAK93495.1| unnamed protein product [Paramecium tetraurelia]
Length = 723
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 22/45 (48%), Positives = 34/45 (75%), Gaps = 1/45 (2%)
Query: 19 DLDYSKVP-KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
++ S+ P +I + D++ +F++G GPGGQA+ KT+NCV LTH PT
Sbjct: 603 EMKMSRKPVEIHQTDLEWKFIKGGGPGGQAINKTSNCVQLTHTPT 647
>gi|256085783|ref|XP_002579092.1| hypothetical protein [Schistosoma mansoni]
gi|360043221|emb|CCD78633.1| hypothetical protein Smp_079810 [Schistosoma mansoni]
Length = 155
Score = 51.2 bits (121), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 22/34 (64%), Positives = 26/34 (76%)
Query: 29 DEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+E D+ E V GSGPGGQ++ KT NCVVL HIPT
Sbjct: 31 NECDLSEMAVLGSGPGGQSINKTANCVVLKHIPT 64
>gi|348678380|gb|EGZ18197.1| hypothetical protein PHYSODRAFT_383672 [Phytophthora sojae]
Length = 96
Score = 51.2 bits (121), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 26/35 (74%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+ E D+ E FV+GSG GGQ + K NCV+LTH+PT
Sbjct: 1 LREADLDESFVKGSGKGGQKINKVRNCVLLTHVPT 35
>gi|56753039|gb|AAW24729.1| SJCHGC03759 protein [Schistosoma japonicum]
Length = 163
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 24/42 (57%), Positives = 29/42 (69%), Gaps = 1/42 (2%)
Query: 22 YSKVPKI-DEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
YSK + +E D+ E FVRG GPGGQ++ T NCVVL H PT
Sbjct: 33 YSKNQWLFNECDLSEMFVRGWGPGGQSINTTANCVVLKHEPT 74
>gi|453087926|gb|EMF15967.1| hypothetical protein SEPMUDRAFT_81256 [Mycosphaerella populorum
SO2202]
Length = 198
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/35 (62%), Positives = 27/35 (77%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
I EKDI E F++GSGPGGQ + KT++ V L HIPT
Sbjct: 43 ISEKDIIESFLKGSGPGGQKINKTSSAVQLKHIPT 77
>gi|341881935|gb|EGT37870.1| hypothetical protein CAEBREN_31848 [Caenorhabditis brenneri]
Length = 131
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 36/62 (58%), Gaps = 5/62 (8%)
Query: 3 IFRRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+FRR ++ + Y K P++ ++D +++++ G GPGGQ V N V LTHIPT
Sbjct: 1 MFRRMMATPKQKLKNY-----KFPEVRKEDCEQKYISGWGPGGQKVNTAQNAVQLTHIPT 55
Query: 63 DS 64
+
Sbjct: 56 GT 57
>gi|242781170|ref|XP_002479747.1| peptidyl-tRNA hydrolase domain protein [Talaromyces stipitatus
ATCC 10500]
gi|218719894|gb|EED19313.1| peptidyl-tRNA hydrolase domain protein [Talaromyces stipitatus
ATCC 10500]
Length = 174
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 36/61 (59%), Gaps = 5/61 (8%)
Query: 6 RHLSLASSLFRKYDLDYSKV----PKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIP 61
R L L SLF Y K PK+D+KDI +++G+GPGGQ + KTN+ V L H P
Sbjct: 18 RRLQL-RSLFSTYPARAVKQLPPRPKLDDKDITGSYLKGTGPGGQKINKTNSAVQLIHKP 76
Query: 62 T 62
T
Sbjct: 77 T 77
>gi|68489326|ref|XP_711504.1| hypothetical protein CaO19.12943 [Candida albicans SC5314]
gi|68489375|ref|XP_711480.1| hypothetical protein CaO19.5488 [Candida albicans SC5314]
gi|46432785|gb|EAK92252.1| hypothetical protein CaO19.5488 [Candida albicans SC5314]
gi|46432811|gb|EAK92277.1| hypothetical protein CaO19.12943 [Candida albicans SC5314]
gi|238882388|gb|EEQ46026.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 171
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 39/67 (58%), Gaps = 13/67 (19%)
Query: 8 LSLASSLFRKYDLDYSKVPK-----------IDEKDIQERFVRGS-GPGGQAVAKTNNCV 55
++L SLF L Y +PK I E+DI+E+F+ G GPGGQ + KTN+ V
Sbjct: 5 INLFRSLFTSNSLKYG-IPKKNKLPPRPKHLIKEEDIEEKFLHGGRGPGGQKINKTNSKV 63
Query: 56 VLTHIPT 62
LTHIPT
Sbjct: 64 QLTHIPT 70
>gi|336257871|ref|XP_003343757.1| hypothetical protein SMAC_04415 [Sordaria macrospora k-hell]
gi|380091615|emb|CCC10747.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 250
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 20/38 (52%), Positives = 30/38 (78%)
Query: 26 PKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTD 63
PK+ E +++E +++GSGPGGQ + KTN+ V L HIPT+
Sbjct: 81 PKLPEDELEEVYLKGSGPGGQKINKTNSAVQLRHIPTN 118
>gi|85101373|ref|XP_961134.1| hypothetical protein NCU04174 [Neurospora crassa OR74A]
gi|16944642|emb|CAD11402.1| conserved hypothetical protein [Neurospora crassa]
gi|28922674|gb|EAA31898.1| predicted protein [Neurospora crassa OR74A]
Length = 172
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 30/38 (78%)
Query: 26 PKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTD 63
PK+ E +++E +++GSGPGGQ + KTN+ V L HIPT+
Sbjct: 5 PKLPEDELEEVYLKGSGPGGQKINKTNSAVQLRHIPTN 42
>gi|336472220|gb|EGO60380.1| hypothetical protein NEUTE1DRAFT_97551 [Neurospora tetrasperma
FGSC 2508]
gi|350294560|gb|EGZ75645.1| hypothetical protein NEUTE2DRAFT_126599 [Neurospora tetrasperma
FGSC 2509]
Length = 168
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 30/38 (78%)
Query: 26 PKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTD 63
PK+ E +++E +++GSGPGGQ + KTN+ V L HIPT+
Sbjct: 5 PKLPEDELEEVYLKGSGPGGQKINKTNSAVQLRHIPTN 42
>gi|51245661|ref|YP_065545.1| peptide chain release factor 2 [Desulfotalea psychrophila LSv54]
gi|50876698|emb|CAG36538.1| probable peptide chain release factor 2 [Desulfotalea psychrophila
LSv54]
Length = 285
Score = 50.4 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/58 (46%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S AS + +LD + IDEKD++ R SG GGQ V KT++ + LTH+PT
Sbjct: 131 RRHTSFASVMVMP-ELDNTVDVDIDEKDLRVDTYRASGAGGQHVNKTDSAIRLTHLPT 187
>gi|451994802|gb|EMD87271.1| hypothetical protein COCHEDRAFT_1184107 [Cochliobolus
heterostrophus C5]
Length = 165
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/37 (56%), Positives = 28/37 (75%)
Query: 26 PKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
P +DE D+ E F++GSGPGGQ + KT++ V L HIPT
Sbjct: 23 PVLDESDLIENFLKGSGPGGQKINKTSSAVQLKHIPT 59
>gi|85860191|ref|YP_462393.1| peptide chain release factor [Syntrophus aciditrophicus SB]
gi|85723282|gb|ABC78225.1| peptide chain release factor [Syntrophus aciditrophicus SB]
Length = 136
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/35 (60%), Positives = 25/35 (71%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
I E D++E F+R SGPGGQ V KT CV L H+PT
Sbjct: 20 ISEDDLRETFIRSSGPGGQNVNKTATCVYLVHLPT 54
>gi|320037150|gb|EFW19088.1| hypothetical protein CPSG_04634 [Coccidioides posadasii str.
Silveira]
Length = 172
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 38/60 (63%), Gaps = 3/60 (5%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTDS 64
RR LS +++L K P IDE +I +++GSGPGGQ + KT++ V L H+PT++
Sbjct: 23 RRPLSSSNALAAK---QMPPRPTIDESEITGTYLKGSGPGGQKINKTSSAVQLIHLPTNT 79
>gi|373852836|ref|ZP_09595636.1| Class I peptide chain release factor [Opitutaceae bacterium TAV5]
gi|391229432|ref|ZP_10265638.1| protein chain release factor B [Opitutaceae bacterium TAV1]
gi|372475065|gb|EHP35075.1| Class I peptide chain release factor [Opitutaceae bacterium TAV5]
gi|391219093|gb|EIP97513.1| protein chain release factor B [Opitutaceae bacterium TAV1]
Length = 136
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 32/52 (61%), Gaps = 9/52 (17%)
Query: 20 LDYSKVPKIDEK---------DIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+D S +I E+ D++ERFVRGSGPGGQ + KT++ V L H PT
Sbjct: 1 MDVSGQSQIQERLDALGVLPGDVEERFVRGSGPGGQKINKTSSTVCLRHAPT 52
>gi|154148037|ref|YP_001406088.1| peptide chain release factor 2 [Campylobacter hominis ATCC BAA-381]
gi|238686699|sp|A7I0P7.1|RF2_CAMHC RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|153804046|gb|ABS51053.1| peptide chain release factor 2 [Campylobacter hominis ATCC BAA-381]
Length = 364
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 28/59 (47%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTD 63
RRH S AS + +LD IDEKD++ + R SG GGQ V KT + V +THIPT+
Sbjct: 211 RRHTSFASVVVSP-ELDDDIQINIDEKDLRIDYYRSSGAGGQHVNKTESAVRITHIPTN 268
>gi|119467602|ref|XP_001257607.1| peptidyl-tRNA hydrolase domain protein [Neosartorya fischeri NRRL
181]
gi|119405759|gb|EAW15710.1| peptidyl-tRNA hydrolase domain protein [Neosartorya fischeri NRRL
181]
Length = 208
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 38/62 (61%), Gaps = 9/62 (14%)
Query: 4 FRRHLSLASSLFRKYDLDYSKVP---KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHI 60
RR +LASSL K ++P KID+ D+ +++G+GPGGQ + KTN+ V L H
Sbjct: 32 LRRSFTLASSLSAK------QLPPRLKIDDADLTVSYLKGTGPGGQKINKTNSAVQLIHK 85
Query: 61 PT 62
PT
Sbjct: 86 PT 87
>gi|212526542|ref|XP_002143428.1| peptidyl-tRNA hydrolase domain protein [Talaromyces marneffei
ATCC 18224]
gi|210072826|gb|EEA26913.1| peptidyl-tRNA hydrolase domain protein [Talaromyces marneffei
ATCC 18224]
Length = 177
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 28/37 (75%)
Query: 26 PKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
PK+D+KDI +++G+GPGGQ + KTN+ V L H PT
Sbjct: 39 PKLDDKDITGSYLKGTGPGGQKINKTNSAVQLIHKPT 75
>gi|46125917|ref|XP_387512.1| hypothetical protein FG07336.1 [Gibberella zeae PH-1]
Length = 189
Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 26/33 (78%)
Query: 30 EKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
E +I+E +V+GSGPGGQ + KTN+ V L H+PT
Sbjct: 44 ESEIEESYVKGSGPGGQKINKTNSAVQLKHVPT 76
>gi|408396484|gb|EKJ75641.1| hypothetical protein FPSE_04142 [Fusarium pseudograminearum
CS3096]
Length = 189
Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 26/33 (78%)
Query: 30 EKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
E +I+E +V+GSGPGGQ + KTN+ V L H+PT
Sbjct: 44 ESEIEESYVKGSGPGGQKINKTNSAVQLKHVPT 76
>gi|260785096|ref|XP_002587599.1| hypothetical protein BRAFLDRAFT_95745 [Branchiostoma floridae]
gi|229272748|gb|EEN43610.1| hypothetical protein BRAFLDRAFT_95745 [Branchiostoma floridae]
Length = 177
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/26 (73%), Positives = 21/26 (80%)
Query: 37 FVRGSGPGGQAVAKTNNCVVLTHIPT 62
F RG GPGGQA KTNNCV+L H+PT
Sbjct: 75 FQRGWGPGGQATNKTNNCVLLKHVPT 100
>gi|341881932|gb|EGT37867.1| hypothetical protein CAEBREN_16253 [Caenorhabditis brenneri]
Length = 421
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 22/63 (34%), Positives = 37/63 (58%), Gaps = 5/63 (7%)
Query: 2 SIFRRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIP 61
++FRR ++ + Y K P++ ++D +++++ G GPGGQ V N V LTHIP
Sbjct: 6 AMFRRMMATPKQKLKNY-----KFPEVRKEDCEQKYISGWGPGGQKVNTAQNAVQLTHIP 60
Query: 62 TDS 64
T +
Sbjct: 61 TGT 63
>gi|156064005|ref|XP_001597924.1| hypothetical protein SS1G_00010 [Sclerotinia sclerotiorum 1980]
gi|154690872|gb|EDN90610.1| hypothetical protein SS1G_00010 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 201
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 26/61 (42%), Positives = 38/61 (62%), Gaps = 2/61 (3%)
Query: 2 SIFRRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIP 61
SI +R + ++L++K D + IDE + E F+ GSGPGGQ + KT++ V L HIP
Sbjct: 35 SIIKRSICSTTTLWKKKMPD--RPAPIDEAEFTEVFLHGSGPGGQKINKTSSAVQLKHIP 92
Query: 62 T 62
T
Sbjct: 93 T 93
>gi|58257471|gb|AAW69357.1| peptide chain release factor-like protein [Magnaporthe grisea]
gi|440470023|gb|ELQ39112.1| peptidyl-tRNA hydrolase domain-containing protein [Magnaporthe
oryzae Y34]
gi|440489487|gb|ELQ69136.1| peptidyl-tRNA hydrolase domain-containing protein [Magnaporthe
oryzae P131]
Length = 195
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 26/33 (78%)
Query: 30 EKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
E +I+E F++GSGPGGQ + KTN+ V L HIPT
Sbjct: 67 ETEIEESFLKGSGPGGQKINKTNSAVQLKHIPT 99
>gi|389644480|ref|XP_003719872.1| peptidyl-tRNA hydrolase domain-containing protein [Magnaporthe
oryzae 70-15]
gi|351639641|gb|EHA47505.1| peptidyl-tRNA hydrolase domain-containing protein [Magnaporthe
oryzae 70-15]
Length = 201
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 26/33 (78%)
Query: 30 EKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
E +I+E F++GSGPGGQ + KTN+ V L HIPT
Sbjct: 73 ETEIEESFLKGSGPGGQKINKTNSAVQLKHIPT 105
>gi|70984320|ref|XP_747675.1| peptidyl-tRNA hydrolase domain protein [Aspergillus fumigatus
Af293]
gi|66845302|gb|EAL85637.1| peptidyl-tRNA hydrolase domain protein [Aspergillus fumigatus
Af293]
gi|159122461|gb|EDP47582.1| peptidyl-tRNA hydrolase domain protein [Aspergillus fumigatus
A1163]
Length = 208
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 38/62 (61%), Gaps = 9/62 (14%)
Query: 4 FRRHLSLASSLFRKYDLDYSKVP---KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHI 60
RR +LASSL K ++P KID+ D+ +++G+GPGGQ + KTN+ V L H
Sbjct: 32 LRRSFTLASSLSAK------QLPPRLKIDDADLTVSYLKGTGPGGQKINKTNSAVQLIHK 85
Query: 61 PT 62
PT
Sbjct: 86 PT 87
>gi|301064303|ref|ZP_07204737.1| peptide chain release factor 2 [delta proteobacterium NaphS2]
gi|300441582|gb|EFK05913.1| peptide chain release factor 2 [delta proteobacterium NaphS2]
Length = 326
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 27/59 (45%), Positives = 39/59 (66%), Gaps = 3/59 (5%)
Query: 5 RRHLSLAS-SLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S AS S+ + DLD + ++DE D++ R SGPGGQ V KT++ + +TH+PT
Sbjct: 173 RRHTSFASVSVLPEVDLDINI--EVDENDLRIDTYRASGPGGQHVNKTSSAIRITHLPT 229
>gi|157870704|ref|XP_001683902.1| peptide chain release factor-like protein [Leishmania major strain
Friedlin]
gi|68126969|emb|CAJ05291.1| peptide chain release factor-like protein [Leishmania major strain
Friedlin]
Length = 439
Score = 48.9 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 20/35 (57%), Positives = 26/35 (74%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+ E D + FVRGSGPGGQ + ++NCVVLTH P+
Sbjct: 286 VHENDCKIDFVRGSGPGGQGMQSSSNCVVLTHKPS 320
>gi|326469360|gb|EGD93369.1| peptidyl-tRNA hydrolase [Trichophyton tonsurans CBS 112818]
gi|326483473|gb|EGE07483.1| hypothetical protein TEQG_06610 [Trichophyton equinum CBS 127.97]
Length = 191
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 29/39 (74%)
Query: 26 PKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTDS 64
P IDE +I +++GSGPGGQ + KT++ V L HIPT++
Sbjct: 47 PTIDESEITGTYLKGSGPGGQKINKTSSAVQLIHIPTNT 85
>gi|398016586|ref|XP_003861481.1| peptide chain release factor-like protein [Leishmania donovani]
gi|322499707|emb|CBZ34781.1| peptide chain release factor-like protein [Leishmania donovani]
Length = 439
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 20/35 (57%), Positives = 26/35 (74%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+ E D + FVRGSGPGGQ + ++NCVVLTH P+
Sbjct: 286 VHESDCKIDFVRGSGPGGQGMQSSSNCVVLTHKPS 320
>gi|146088922|ref|XP_001466182.1| peptide chain release factor-like protein [Leishmania infantum
JPCM5]
gi|134070284|emb|CAM68621.1| peptide chain release factor-like protein [Leishmania infantum
JPCM5]
Length = 439
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 20/35 (57%), Positives = 26/35 (74%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+ E D + FVRGSGPGGQ + ++NCVVLTH P+
Sbjct: 286 VHESDCKIDFVRGSGPGGQGMQSSSNCVVLTHKPS 320
>gi|392869399|gb|EJB11744.1| hypothetical protein CIMG_10212 [Coccidioides immitis RS]
Length = 172
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 29/39 (74%)
Query: 26 PKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTDS 64
P IDE +I +++GSGPGGQ + KT++ V L H+PT++
Sbjct: 41 PTIDESEITGTYLKGSGPGGQKINKTSSAVQLIHLPTNT 79
>gi|401423431|ref|XP_003876202.1| peptide chain release factor-like protein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322492443|emb|CBZ27717.1| peptide chain release factor-like protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 439
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 20/35 (57%), Positives = 26/35 (74%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+ E D + FVRGSGPGGQ + ++NCVVLTH P+
Sbjct: 286 VHESDCKIDFVRGSGPGGQGMQSSSNCVVLTHKPS 320
>gi|308271179|emb|CBX27788.1| Peptide chain release factor 2 [uncultured Desulfobacterium sp.]
Length = 344
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+RH S AS +F +LD S IDEKD++ R SG GGQ V KT++ + +TH+PT
Sbjct: 189 KRHTSFAS-VFVYPELDNSIEIDIDEKDLRIDIFRSSGAGGQHVNKTSSAIRITHLPT 245
>gi|258570383|ref|XP_002543995.1| predicted protein [Uncinocarpus reesii 1704]
gi|237904265|gb|EEP78666.1| predicted protein [Uncinocarpus reesii 1704]
Length = 162
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 29/39 (74%)
Query: 26 PKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTDS 64
P IDE +I +++GSGPGGQ + KT++ V L H+PT++
Sbjct: 40 PTIDESEITGSYLKGSGPGGQKINKTSSAVQLIHLPTNT 78
>gi|303324301|ref|XP_003072138.1| Peptidyl-tRNA hydrolase domain containing protein [Coccidioides
posadasii C735 delta SOWgp]
gi|240111848|gb|EER29993.1| Peptidyl-tRNA hydrolase domain containing protein [Coccidioides
posadasii C735 delta SOWgp]
Length = 136
Score = 48.5 bits (114), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 29/39 (74%)
Query: 26 PKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTDS 64
P IDE +I +++GSGPGGQ + KT++ V L H+PT++
Sbjct: 5 PTIDESEITGTYLKGSGPGGQKINKTSSAVQLIHLPTNT 43
>gi|154338826|ref|XP_001565635.1| peptide chain release factor-like protein [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134062687|emb|CAM39130.1| peptide chain release factor-like protein [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 302
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 20/35 (57%), Positives = 26/35 (74%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+ E D + FVRGSGPGGQ + ++NCVVLTH P+
Sbjct: 149 VHESDCKIDFVRGSGPGGQGMQSSSNCVVLTHKPS 183
>gi|452986667|gb|EME86423.1| hypothetical protein MYCFIDRAFT_162030, partial [Pseudocercospora
fijiensis CIRAD86]
Length = 141
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 27/35 (77%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
I E DI+E F++G+GPGGQ + KT++ V L H+PT
Sbjct: 3 IPESDIEESFLKGTGPGGQKINKTSSAVQLKHLPT 37
>gi|322421630|ref|YP_004200853.1| class I peptide chain release factor [Geobacter sp. M18]
gi|320128017|gb|ADW15577.1| Class I peptide chain release factor [Geobacter sp. M18]
Length = 143
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 27/35 (77%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+ EKD++ERFV SG GGQ V K+++CV L HIP+
Sbjct: 23 VAEKDLEERFVHASGRGGQHVNKSSSCVYLKHIPS 57
>gi|325185474|emb|CCA19957.1| unnamed protein product putative [Albugo laibachii Nc14]
Length = 152
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 25/33 (75%)
Query: 30 EKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
E+D+ E+FV+GSG GGQ + K NCV+L H PT
Sbjct: 38 EEDLNEQFVKGSGKGGQKINKVRNCVLLKHSPT 70
>gi|348678390|gb|EGZ18207.1| hypothetical protein PHYSODRAFT_383105 [Phytophthora sojae]
Length = 103
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 25/35 (71%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+ E D+ E FV+GSG GGQ + K NCV+LTH+ T
Sbjct: 1 LREADLDESFVKGSGKGGQKINKVRNCVLLTHVTT 35
>gi|324521421|gb|ADY47851.1| Peptide chain release factor [Ascaris suum]
Length = 141
Score = 48.5 bits (114), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 26/37 (70%)
Query: 26 PKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
P+I +D +++F+ GSGPGGQ V N V+L HIPT
Sbjct: 35 PEIRREDCEQKFISGSGPGGQKVNTAQNAVMLKHIPT 71
>gi|348554383|ref|XP_003463005.1| PREDICTED: probable peptide chain release factor C12orf65,
mitochondrial-like [Cavia porcellus]
Length = 182
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 19/27 (70%), Positives = 23/27 (85%)
Query: 36 RFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+FV+G GPGGQA KTNNCVVL H+P+
Sbjct: 63 QFVKGHGPGGQATNKTNNCVVLKHVPS 89
>gi|295398527|ref|ZP_06808561.1| peptide chain release factor RF2 [Aerococcus viridans ATCC 11563]
gi|294973250|gb|EFG49043.1| peptide chain release factor RF2 [Aerococcus viridans ATCC 11563]
Length = 353
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 27/58 (46%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S AS LD + +IDE DI+ R SG GGQ + KT++ V LTH+PT
Sbjct: 195 RRHTSFASVEIMPV-LDQNTEIEIDESDIEMDVFRASGAGGQHINKTSSAVRLTHVPT 251
>gi|347836659|emb|CCD51231.1| hypothetical protein [Botryotinia fuckeliana]
Length = 159
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/35 (60%), Positives = 25/35 (71%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
IDE D E F+ GSGPGGQ + KT++ V L HIPT
Sbjct: 8 IDEADFTEVFLHGSGPGGQKINKTSSAVQLKHIPT 42
>gi|392901269|ref|NP_001255661.1| Protein T23B5.4, isoform a [Caenorhabditis elegans]
gi|313004791|emb|CAE17950.2| Protein T23B5.4, isoform a [Caenorhabditis elegans]
Length = 133
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 5/64 (7%)
Query: 1 MSIFRRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHI 60
++ RR L+ + Y K P + ++D +++++ G GPGGQ V N V LTH+
Sbjct: 5 WTLIRRMLATPKQKLKNY-----KFPDVRKEDCEQKYISGWGPGGQKVNTAQNAVQLTHL 59
Query: 61 PTDS 64
PT +
Sbjct: 60 PTGT 63
>gi|241951644|ref|XP_002418544.1| conserved hypothetical protein [Candida dubliniensis CD36]
gi|223641883|emb|CAX43846.1| conserved hypothetical protein [Candida dubliniensis CD36]
Length = 171
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 39/67 (58%), Gaps = 13/67 (19%)
Query: 8 LSLASSLFRKYDLDYSKVPK-----------IDEKDIQERFVRGS-GPGGQAVAKTNNCV 55
++L SLF L Y +PK I E+D++E+F+ G GPGGQ + K+N+ V
Sbjct: 5 INLFRSLFTSNSLKYG-IPKKNKLPPRPKHLIKEEDLEEKFLHGGRGPGGQKINKSNSKV 63
Query: 56 VLTHIPT 62
LTHIPT
Sbjct: 64 QLTHIPT 70
>gi|451945828|ref|YP_007466423.1| bacterial peptide chain release factor 2 (bRF-2) [Desulfocapsa
sulfexigens DSM 10523]
gi|451905176|gb|AGF76770.1| bacterial peptide chain release factor 2 (bRF-2) [Desulfocapsa
sulfexigens DSM 10523]
Length = 330
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 26/58 (44%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S AS + +LD + IDEKD++ R SG GGQ V KT++ + +THIP+
Sbjct: 176 RRHTSFASVMVMP-ELDDTIDVDIDEKDLRVDTYRASGSGGQHVNKTDSAIRITHIPS 232
>gi|444724902|gb|ELW65488.1| hypothetical protein TREES_T100008977 [Tupaia chinensis]
Length = 214
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 19/27 (70%), Positives = 23/27 (85%)
Query: 36 RFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+FV+G GPGGQA KT+NCVVL HIP+
Sbjct: 111 QFVKGHGPGGQATNKTSNCVVLKHIPS 137
>gi|406988411|gb|EKE08419.1| hypothetical protein ACD_17C00173G0003 [uncultured bacterium]
Length = 130
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 26/35 (74%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+ E D+ E+F+ G+G GGQ + KT+NCV L H+PT
Sbjct: 16 LQEGDLIEKFILGTGKGGQKINKTSNCVYLKHLPT 50
>gi|452845154|gb|EME47087.1| hypothetical protein DOTSEDRAFT_85667 [Dothistroma septosporum
NZE10]
Length = 191
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 26/35 (74%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
I E DI E F++GSGPGGQ + KT++ V L H+PT
Sbjct: 41 IPETDITESFLKGSGPGGQKINKTSSAVQLKHLPT 75
>gi|367038745|ref|XP_003649753.1| hypothetical protein THITE_2125932 [Thielavia terrestris NRRL
8126]
gi|346997014|gb|AEO63417.1| hypothetical protein THITE_2125932 [Thielavia terrestris NRRL
8126]
Length = 223
Score = 47.8 bits (112), Expect = 8e-04, Method: Composition-based stats.
Identities = 20/33 (60%), Positives = 26/33 (78%)
Query: 30 EKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
E +I+E F++GSGPGGQ + KTN+ V L HIPT
Sbjct: 23 ESEIEETFIKGSGPGGQKINKTNSAVQLRHIPT 55
>gi|171694017|ref|XP_001911933.1| hypothetical protein [Podospora anserina S mat+]
gi|170946957|emb|CAP73761.1| unnamed protein product [Podospora anserina S mat+]
Length = 187
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 27/34 (79%)
Query: 30 EKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTD 63
E +I+E F++GSGPGGQ + KTN+ V + H+PT+
Sbjct: 10 ESEIEESFLKGSGPGGQKINKTNSAVQIKHLPTN 43
>gi|358401406|gb|EHK50712.1| hypothetical protein TRIATDRAFT_18591, partial [Trichoderma
atroviride IMI 206040]
Length = 140
Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 25/31 (80%)
Query: 32 DIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+I+E +++GSGPGGQ + KTN+ V L HIPT
Sbjct: 15 EIEESYLKGSGPGGQKINKTNSAVQLKHIPT 45
>gi|302911185|ref|XP_003050437.1| hypothetical protein NECHADRAFT_84770 [Nectria haematococca mpVI
77-13-4]
gi|256731374|gb|EEU44724.1| hypothetical protein NECHADRAFT_84770 [Nectria haematococca mpVI
77-13-4]
Length = 186
Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 26/33 (78%)
Query: 30 EKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
E +I+E +V+GSGPGGQ + KTN+ V L HIPT
Sbjct: 45 EFEIEESYVKGSGPGGQKINKTNSAVQLKHIPT 77
>gi|384501006|gb|EIE91497.1| hypothetical protein RO3G_16208 [Rhizopus delemar RA 99-880]
Length = 166
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 30/47 (63%), Gaps = 7/47 (14%)
Query: 23 SKVPKIDEK-------DIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
SK PK + K D+ E FV+GSGPGGQ + K ++CV L HIPT
Sbjct: 32 SKTPKQERKKIVLRDEDLIETFVKGSGPGGQCINKRSSCVDLRHIPT 78
>gi|338732935|ref|YP_004671408.1| putative peptide chain release factor 1 [Simkania negevensis Z]
gi|336482318|emb|CCB88917.1| putative peptide chain release factor 1 [Simkania negevensis Z]
Length = 138
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/35 (60%), Positives = 25/35 (71%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
I E D+ E+F+ GSG GGQ V KT +CV L HIPT
Sbjct: 20 IREDDLLEKFILGSGKGGQKVNKTASCVYLKHIPT 54
>gi|380494985|emb|CCF32737.1| RF-1 domain-containing protein [Colletotrichum higginsianum]
Length = 186
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
Query: 12 SSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
S+ +K+++ P D DI+E +++GSGPGGQ + KT++ V L HIPT
Sbjct: 58 SAALKKHEMPPRPRPPPD-SDIEESYLKGSGPGGQKINKTSSAVQLKHIPT 107
>gi|406912966|gb|EKD52465.1| hypothetical protein ACD_62C00013G0003 [uncultured bacterium]
Length = 137
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 24/30 (80%)
Query: 33 IQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
++E F+RGSG GGQ + KTN+CV LTH P+
Sbjct: 26 LREEFIRGSGAGGQKINKTNSCVQLTHTPS 55
>gi|344232760|gb|EGV64633.1| hypothetical protein CANTEDRAFT_120400 [Candida tenuis ATCC
10573]
Length = 164
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/36 (61%), Positives = 28/36 (77%), Gaps = 1/36 (2%)
Query: 28 IDEKDIQERFVRG-SGPGGQAVAKTNNCVVLTHIPT 62
I E+DI+E F++G SGPGGQ + KTN+ V L HIPT
Sbjct: 39 IKEEDIEESFIKGGSGPGGQKINKTNSKVQLKHIPT 74
>gi|448517215|ref|XP_003867740.1| hypothetical protein CORT_0B05940 [Candida orthopsilosis Co
90-125]
gi|380352079|emb|CCG22303.1| hypothetical protein CORT_0B05940 [Candida orthopsilosis]
Length = 180
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/36 (58%), Positives = 27/36 (75%), Gaps = 1/36 (2%)
Query: 28 IDEKDIQERFVRGS-GPGGQAVAKTNNCVVLTHIPT 62
+ E+DIQE F++G GPGGQ + KTN+ V LTH PT
Sbjct: 33 VKEEDIQESFIKGGRGPGGQKINKTNSKVQLTHKPT 68
>gi|322697002|gb|EFY88787.1| peptidyl-tRNA hydrolase domain protein [Metarhizium acridum CQMa
102]
Length = 187
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 25/31 (80%)
Query: 32 DIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+I+E F++GSGPGGQ + KTN+ V L H+PT
Sbjct: 44 EIEESFLKGSGPGGQKINKTNSAVQLKHVPT 74
>gi|322705423|gb|EFY97009.1| peptidyl-tRNA hydrolase domain protein [Metarhizium anisopliae
ARSEF 23]
Length = 182
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 25/31 (80%)
Query: 32 DIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+I+E F++GSGPGGQ + KTN+ V L H+PT
Sbjct: 44 EIEESFLKGSGPGGQKINKTNSAVQLKHVPT 74
>gi|340522855|gb|EGR53088.1| hypothetical protein TRIREDRAFT_124322 [Trichoderma reesei QM6a]
Length = 220
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 26/33 (78%)
Query: 30 EKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+ +I+E +++GSGPGGQ + KTN+ V L HIPT
Sbjct: 49 DSEIEESYLKGSGPGGQKINKTNSAVQLKHIPT 81
>gi|308481019|ref|XP_003102715.1| hypothetical protein CRE_29955 [Caenorhabditis remanei]
gi|308260801|gb|EFP04754.1| hypothetical protein CRE_29955 [Caenorhabditis remanei]
Length = 162
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 30/48 (62%)
Query: 17 KYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTDS 64
K L K P++ ++D +++++ G GPGGQ V N V LTH+PT +
Sbjct: 16 KQKLKGYKFPEVRKEDCEQKYISGWGPGGQKVNTAQNAVQLTHLPTGT 63
>gi|88606704|ref|YP_505023.1| peptide chain release factor 1 [Anaplasma phagocytophilum HZ]
gi|119361507|sp|Q2GKS8.1|RF1_ANAPZ RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|88597767|gb|ABD43237.1| peptide chain release factor 1 [Anaplasma phagocytophilum HZ]
Length = 359
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/36 (58%), Positives = 27/36 (75%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
KIDEKD++ R SGPGGQ+V T++ V +THIPT
Sbjct: 216 KIDEKDLRIDVYRSSGPGGQSVNTTDSAVRITHIPT 251
>gi|424821164|ref|ZP_18246202.1| Peptide chain release factor 2 [Campylobacter fetus subsp.
venerealis NCTC 10354]
gi|342327943|gb|EGU24427.1| Peptide chain release factor 2 [Campylobacter fetus subsp.
venerealis NCTC 10354]
Length = 369
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 26/58 (44%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S SS+ ++D +I+EKD++ + R SG GGQ V KT + V +THIPT
Sbjct: 211 RRHTSF-SSVMVSPEVDDDIAIEIEEKDLRLDYYRASGAGGQHVNKTESAVRITHIPT 267
>gi|118475480|ref|YP_892510.1| peptide chain release factor 2 [Campylobacter fetus subsp. fetus
82-40]
gi|166223624|sp|A0RQM7.1|RF2_CAMFF RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|118414706|gb|ABK83126.1| peptide chain release factor 2 [Campylobacter fetus subsp. fetus
82-40]
Length = 369
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 26/58 (44%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S SS+ ++D +I+EKD++ + R SG GGQ V KT + V +THIPT
Sbjct: 211 RRHTSF-SSVMVSPEVDDDIAIEIEEKDLRLDYYRASGAGGQHVNKTESAVRITHIPT 267
>gi|327309086|ref|XP_003239234.1| peptidyl-tRNA hydrolase [Trichophyton rubrum CBS 118892]
gi|326459490|gb|EGD84943.1| peptidyl-tRNA hydrolase [Trichophyton rubrum CBS 118892]
Length = 190
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 29/39 (74%)
Query: 26 PKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTDS 64
P ID+ +I +++GSGPGGQ + KT++ V L HIPT++
Sbjct: 47 PTIDDSEITGTYLKGSGPGGQKINKTSSAVQLIHIPTNT 85
>gi|194214381|ref|XP_001492966.2| PREDICTED: probable peptide chain release factor C12orf65,
mitochondrial-like [Equus caballus]
Length = 166
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/42 (52%), Positives = 33/42 (78%)
Query: 21 DYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
D +P ++E +++E+FV+G GPGGQA KT+NCVVL H+P+
Sbjct: 48 DRPALPSLEESELEEQFVKGHGPGGQATNKTSNCVVLKHMPS 89
>gi|114776305|ref|ZP_01451350.1| peptide chain release factor 2 [Mariprofundus ferrooxydans PV-1]
gi|114553135|gb|EAU55533.1| peptide chain release factor 2 [Mariprofundus ferrooxydans PV-1]
Length = 372
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 25/59 (42%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTD 63
RRH S AS +F D++ ID D++ R SG GGQ + KT++ V LTH+PT+
Sbjct: 213 RRHTSFAS-VFAYPDIEKDIEIDIDPSDVRTDTYRASGAGGQHINKTDSAVRLTHVPTN 270
>gi|353234841|emb|CCA66862.1| related to polypeptide chain release factors [Piriformospora indica
DSM 11827]
Length = 265
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 28/39 (71%)
Query: 24 KVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
++P ++E D++E FV+G GPGGQ + K + V L HIP+
Sbjct: 157 EIPALNEDDLEESFVKGGGPGGQCINKRSTNVDLLHIPS 195
>gi|346322815|gb|EGX92413.1| peptidyl-tRNA hydrolase domain protein [Cordyceps militaris CM01]
Length = 170
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 25/31 (80%)
Query: 32 DIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
D++E +++GSGPGGQ + KTN+ V L HIPT
Sbjct: 44 DLEESYLKGSGPGGQKINKTNSAVQLKHIPT 74
>gi|85859385|ref|YP_461587.1| peptide chain release factor 2 [Syntrophus aciditrophicus SB]
gi|85722476|gb|ABC77419.1| bacterial peptide Chain Release Factor 2 (RF-2) [Syntrophus
aciditrophicus SB]
Length = 279
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 26/58 (44%), Positives = 38/58 (65%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S AS +F +++ V +IDEKD++ R +G GGQ V KT++ V +TH+PT
Sbjct: 127 RRHTSFAS-VFVYPEVNDEIVVEIDEKDLRIDTYRSTGAGGQHVNKTDSAVRITHMPT 183
>gi|315053701|ref|XP_003176225.1| hypothetical protein MGYG_00314 [Arthroderma gypseum CBS 118893]
gi|311338071|gb|EFQ97273.1| hypothetical protein MGYG_00314 [Arthroderma gypseum CBS 118893]
Length = 192
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 29/39 (74%)
Query: 26 PKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTDS 64
P ID+ +I +++GSGPGGQ + KT++ V L HIPT++
Sbjct: 47 PTIDDSEITGTYLKGSGPGGQKINKTSSAVQLIHIPTNT 85
>gi|254995073|ref|ZP_05277263.1| peptide chain release factor 1 [Anaplasma marginale str.
Mississippi]
Length = 359
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/36 (58%), Positives = 27/36 (75%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
KIDEKD++ R SGPGGQ+V T++ V +THIPT
Sbjct: 216 KIDEKDLRIDVYRSSGPGGQSVNTTDSAVRITHIPT 251
>gi|400598659|gb|EJP66368.1| RF-1 domain-containing protein [Beauveria bassiana ARSEF 2860]
Length = 200
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 25/31 (80%)
Query: 32 DIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+++E F++GSGPGGQ + KTN+ V L HIPT
Sbjct: 40 ELEESFLKGSGPGGQKINKTNSAVQLKHIPT 70
>gi|56416889|ref|YP_153963.1| peptide chain release factor 1 [Anaplasma marginale str. St.
Maries]
gi|222475254|ref|YP_002563670.1| peptide chain release factor 1 [Anaplasma marginale str. Florida]
gi|255003238|ref|ZP_05278202.1| peptide chain release factor 1 [Anaplasma marginale str. Puerto
Rico]
gi|255004365|ref|ZP_05279166.1| peptide chain release factor 1 [Anaplasma marginale str. Virginia]
gi|81599140|sp|Q5PAH2.1|RF1_ANAMM RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|254790858|sp|B9KIV2.1|RF1_ANAMF RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|56388121|gb|AAV86708.1| peptide chain release factor 1 [Anaplasma marginale str. St.
Maries]
gi|222419391|gb|ACM49414.1| peptide chain release factor 1 (prfA) [Anaplasma marginale str.
Florida]
Length = 359
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/36 (58%), Positives = 27/36 (75%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
KIDEKD++ R SGPGGQ+V T++ V +THIPT
Sbjct: 216 KIDEKDLRIDVYRSSGPGGQSVNTTDSAVRITHIPT 251
>gi|269958696|ref|YP_003328483.1| peptide chain release factor 1 [Anaplasma centrale str. Israel]
gi|269848525|gb|ACZ49169.1| peptide chain release factor 1 [Anaplasma centrale str. Israel]
Length = 359
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/36 (58%), Positives = 27/36 (75%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
KIDEKD++ R SGPGGQ+V T++ V +THIPT
Sbjct: 216 KIDEKDLRIDVYRSSGPGGQSVNTTDSAVRITHIPT 251
>gi|253702397|ref|YP_003023586.1| class I peptide chain release factor [Geobacter sp. M21]
gi|251777247|gb|ACT19828.1| Class I peptide chain release factor [Geobacter sp. M21]
Length = 132
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 26/35 (74%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+ E+ I+ERFV SG GGQ V K+++CV L H+PT
Sbjct: 23 VSEQQIEERFVHASGRGGQHVNKSSSCVYLKHLPT 57
>gi|148266078|ref|YP_001232784.1| class I peptide chain release factor [Geobacter uraniireducens
Rf4]
gi|146399578|gb|ABQ28211.1| Class I peptide chain release factor [Geobacter uraniireducens
Rf4]
Length = 127
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 25/35 (71%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+ E+DI E+F+R SG GGQ V KT+ CV L H PT
Sbjct: 23 VREEDIDEQFIRSSGKGGQHVNKTSTCVYLKHKPT 57
>gi|407404213|gb|EKF29770.1| peptide chain release factor 1, putative [Trypanosoma cruzi
marinkellei]
Length = 459
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 25/35 (71%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+ E D + FVRGSGPGGQ + ++N V LTHIP+
Sbjct: 306 VHENDCKIEFVRGSGPGGQGMQSSSNAVCLTHIPS 340
>gi|197120075|ref|YP_002140502.1| peptidyl-tRNA hydrolase-like protein [Geobacter bemidjiensis Bem]
gi|197089435|gb|ACH40706.1| peptidyl-tRNA hydrolase-related protein [Geobacter bemidjiensis
Bem]
Length = 132
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 26/35 (74%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+ E+ I+ERFV SG GGQ V K+++CV L H+PT
Sbjct: 23 VSEQQIEERFVHASGRGGQHVNKSSSCVYLKHLPT 57
>gi|90020863|ref|YP_526690.1| peptide chain release factor 2 [Saccharophagus degradans 2-40]
gi|89950463|gb|ABD80478.1| bacterial peptide chain release factor 2 (bRF-2) [Saccharophagus
degradans 2-40]
Length = 347
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 26/58 (44%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S SS+F ++D + +I++ D++E R SG GGQ V KT++ V LTH PT
Sbjct: 194 RRHTSF-SSVFVSPEIDDNIDIEINKADVREDTYRASGAGGQHVNKTDSAVRLTHAPT 250
>gi|358389669|gb|EHK27261.1| hypothetical protein TRIVIDRAFT_63025 [Trichoderma virens Gv29-8]
Length = 197
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 26/33 (78%)
Query: 30 EKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+ +I+E +++GSGPGGQ + KTN+ V L HIPT
Sbjct: 47 DSEIEESYLKGSGPGGQKINKTNSAVQLKHIPT 79
>gi|386747633|ref|YP_006220841.1| peptide chain release factor 2 [Helicobacter cetorum MIT 99-5656]
gi|384553875|gb|AFI05631.1| peptide chain release factor 2 [Helicobacter cetorum MIT 99-5656]
Length = 363
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 26/58 (44%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+RH S AS +LD +IDEKD++ + R SG GGQ V KT + V +TH PT
Sbjct: 211 KRHTSFASVQISP-ELDDGIDIEIDEKDVRYDYYRASGAGGQHVNKTESAVRITHFPT 267
>gi|71650872|ref|XP_814125.1| peptide chain release factor 1 [Trypanosoma cruzi strain CL Brener]
gi|70879071|gb|EAN92274.1| peptide chain release factor 1, putative [Trypanosoma cruzi]
Length = 456
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 19/35 (54%), Positives = 25/35 (71%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+ E D + FVRGSGPGGQ + ++N V LTHIP+
Sbjct: 303 VHENDCKIEFVRGSGPGGQGMQSSSNAVCLTHIPS 337
>gi|71393327|ref|XP_802218.1| peptide chain release factor 1 [Trypanosoma cruzi strain CL Brener]
gi|70859733|gb|EAN80772.1| peptide chain release factor 1, putative [Trypanosoma cruzi]
Length = 270
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 25/35 (71%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+ E D + FVRGSGPGGQ + ++N V LTHIP+
Sbjct: 117 VHENDCKIEFVRGSGPGGQGMQSSSNAVCLTHIPS 151
>gi|209964906|ref|YP_002297821.1| peptide chain release factor 2 PrfB [Rhodospirillum centenum SW]
gi|209958372|gb|ACI99008.1| peptide chain release factor 2 PrfB [Rhodospirillum centenum SW]
Length = 319
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 27/58 (46%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S AS +D V +I+EKD++ R SG GGQ V KT++ V LTH+PT
Sbjct: 156 RRHTSFASVSVTPV-IDDRIVVEINEKDVKVDTYRSSGAGGQHVNKTDSAVRLTHLPT 212
>gi|424862952|ref|ZP_18286865.1| peptide chain release factor 2 [SAR86 cluster bacterium SAR86A]
gi|400757573|gb|EJP71784.1| peptide chain release factor 2 [SAR86 cluster bacterium SAR86A]
Length = 365
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 28/58 (48%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S AS +F ++D S I++ DI+ R SG GGQ V KT++ V LTHIPT
Sbjct: 212 RRHTSFAS-VFISPEVDDSIEININKADIRTDTYRASGAGGQHVNKTDSAVRLTHIPT 268
>gi|146421313|ref|XP_001486606.1| hypothetical protein PGUG_02277 [Meyerozyma guilliermondii ATCC
6260]
Length = 171
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 40/63 (63%), Gaps = 4/63 (6%)
Query: 6 RHLSLASSLFR---KYDLDYSKVPKIDEKDIQERFVRGS-GPGGQAVAKTNNCVVLTHIP 61
RH+S + LF+ K +L I E++I+E F++G GPGGQ + K+N+ V LTHIP
Sbjct: 12 RHISTSGHLFKLLKKNELPPRPKWLIVEEEIKEVFLKGGRGPGGQKINKSNSKVQLTHIP 71
Query: 62 TDS 64
T +
Sbjct: 72 TGT 74
>gi|407846678|gb|EKG02695.1| peptide chain release factor 1, putative [Trypanosoma cruzi]
Length = 459
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 19/35 (54%), Positives = 25/35 (71%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+ E D + FVRGSGPGGQ + ++N V LTHIP+
Sbjct: 306 VHENDCKIEFVRGSGPGGQGMQSSSNAVCLTHIPS 340
>gi|398407371|ref|XP_003855151.1| hypothetical protein MYCGRDRAFT_37496 [Zymoseptoria tritici
IPO323]
gi|339475035|gb|EGP90127.1| hypothetical protein MYCGRDRAFT_37496 [Zymoseptoria tritici
IPO323]
Length = 178
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 26/35 (74%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
I E DI E F++GSGPGGQ + KT++ V L H+PT
Sbjct: 40 IVESDITEAFLKGSGPGGQKINKTSSAVQLKHLPT 74
>gi|295666315|ref|XP_002793708.1| hypothetical protein PAAG_04618 [Paracoccidioides sp. 'lutzii'
Pb01]
gi|226278002|gb|EEH33568.1| hypothetical protein PAAG_04618 [Paracoccidioides sp. 'lutzii'
Pb01]
Length = 175
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 27/37 (72%)
Query: 26 PKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
PK++ +I +++GSGPGGQA+ KTN+ V L H PT
Sbjct: 42 PKLNPAEITGTYLKGSGPGGQAINKTNSAVQLIHKPT 78
>gi|389582206|dbj|GAB64761.1| polypeptide chain release factor 2 [Plasmodium cynomolgi strain B]
Length = 192
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 36/55 (65%), Gaps = 4/55 (7%)
Query: 7 HLSLASSLFRKYDLDYSKVPKID--EKDIQERFVRGSGPGGQAVAKTNNCVVLTH 59
HL+ S K++L K+ I +KDI+E FV+G+G GGQ V KTNNCV++ +
Sbjct: 49 HLNKPSQ--NKFELIRKKLEGIGVFQKDIEESFVKGTGKGGQKVNKTNNCVMIRY 101
>gi|190346160|gb|EDK38179.2| hypothetical protein PGUG_02277 [Meyerozyma guilliermondii ATCC
6260]
Length = 171
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 40/63 (63%), Gaps = 4/63 (6%)
Query: 6 RHLSLASSLFR---KYDLDYSKVPKIDEKDIQERFVRGS-GPGGQAVAKTNNCVVLTHIP 61
RH+S + LF+ K +L I E++I+E F++G GPGGQ + K+N+ V LTHIP
Sbjct: 12 RHISTSGHLFKLLKKNELPPRPKWLIVEEEIKEVFLKGGRGPGGQKINKSNSKVQLTHIP 71
Query: 62 TDS 64
T +
Sbjct: 72 TGT 74
>gi|310792386|gb|EFQ27913.1| RF-1 domain-containing protein [Glomerella graminicola M1.001]
Length = 193
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
Query: 12 SSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
S+ +K+++ P D +I+E +++GSGPGGQ + KT++ V L HIPT
Sbjct: 33 SAALKKHEMPPRPKPPPD-SEIEESYLKGSGPGGQKINKTSSAVQLKHIPT 82
>gi|239614579|gb|EEQ91566.1| conserved hypothetical protein [Ajellomyces dermatitidis ER-3]
Length = 196
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 18/37 (48%), Positives = 27/37 (72%)
Query: 26 PKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
PK+D ++ +++G+GPGGQA+ KTN+ V L H PT
Sbjct: 35 PKLDPSEVTGSYLKGTGPGGQAINKTNSAVQLIHKPT 71
>gi|268537314|ref|XP_002633793.1| Hypothetical protein CBG03485 [Caenorhabditis briggsae]
Length = 137
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 5/64 (7%)
Query: 1 MSIFRRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHI 60
++FRR + + Y K P++ + D +++++ G GPGGQ V N V LTH
Sbjct: 5 WAMFRRTFATPRQKLKGY-----KFPEVKKDDCEQKYISGWGPGGQKVNTAQNAVQLTHR 59
Query: 61 PTDS 64
PT +
Sbjct: 60 PTGT 63
>gi|288817909|ref|YP_003432256.1| peptide chain release factor RF-2 [Hydrogenobacter thermophilus
TK-6]
gi|384128671|ref|YP_005511284.1| peptide chain release factor 2 [Hydrogenobacter thermophilus TK-6]
gi|288787308|dbj|BAI69055.1| peptide chain release factor RF-2 [Hydrogenobacter thermophilus
TK-6]
gi|308751508|gb|ADO44991.1| peptide chain release factor 2 [Hydrogenobacter thermophilus TK-6]
Length = 369
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 30/66 (45%), Positives = 33/66 (50%), Gaps = 17/66 (25%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEK--------DIQERFVRGSGPGGQAVAKTNNCVV 56
RRH S AS S VP+IDEK DIQ R SG GGQ V KT+ V
Sbjct: 209 RRHTSFAS---------VSVVPQIDEKINIEIREEDIQMETFRASGAGGQYVNKTDTAVR 259
Query: 57 LTHIPT 62
+ HIPT
Sbjct: 260 IRHIPT 265
>gi|428172636|gb|EKX41543.1| hypothetical protein GUITHDRAFT_141811 [Guillardia theta CCMP2712]
Length = 215
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/31 (67%), Positives = 25/31 (80%)
Query: 32 DIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
DIQE+FVRGSG GGQ + KT + V +THIPT
Sbjct: 109 DIQEQFVRGSGRGGQKMNKTASKVRITHIPT 139
>gi|327355568|gb|EGE84425.1| peptidyl-tRNA hydrolase domain-containing protein [Ajellomyces
dermatitidis ATCC 18188]
Length = 184
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 27/37 (72%)
Query: 26 PKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
PK+D ++ +++G+GPGGQA+ KTN+ V L H PT
Sbjct: 35 PKLDPSEVTGSYLKGTGPGGQAINKTNSAVQLIHKPT 71
>gi|320587327|gb|EFW99807.1| peptidyl-tRNA hydrolase domain containing protein [Grosmannia
clavigera kw1407]
Length = 149
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 25/33 (75%)
Query: 30 EKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
E +I+E FV+G+GPGGQ + KTN+ V L H PT
Sbjct: 52 EDEIEEMFVKGTGPGGQKINKTNSAVQLIHRPT 84
>gi|240280457|gb|EER43961.1| conserved hypothetical protein [Ajellomyces capsulatus H143]
Length = 186
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 27/37 (72%)
Query: 26 PKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
PK+D ++ +++G+GPGGQA+ KTN+ V L H PT
Sbjct: 35 PKLDPSEVTGSYLKGTGPGGQAINKTNSAVQLIHKPT 71
>gi|428164896|gb|EKX33906.1| hypothetical protein GUITHDRAFT_119889 [Guillardia theta
CCMP2712]
Length = 168
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 34/57 (59%), Gaps = 9/57 (15%)
Query: 15 FRKYDLDYSKVP----KIDE-----KDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+ +D+ KV KI+E ++I+E FVRGSG GGQ + KT N V + H+PT
Sbjct: 24 YHNFDISQGKVDALFDKIEELGIKLEEIEESFVRGSGAGGQKINKTANNVQMKHLPT 80
>gi|326330854|ref|ZP_08197155.1| peptide chain release factor 2 [Nocardioidaceae bacterium Broad-1]
gi|325951384|gb|EGD43423.1| peptide chain release factor 2 [Nocardioidaceae bacterium Broad-1]
Length = 372
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 21/38 (55%), Positives = 27/38 (71%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTDS 64
+IDE DI+ R SGPGGQ+V T++ V LTHIPT +
Sbjct: 232 EIDENDIKVDVYRSSGPGGQSVNTTDSAVRLTHIPTGT 269
>gi|324997823|ref|ZP_08118935.1| peptide chain release factor 2 [Pseudonocardia sp. P1]
Length = 368
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 21/36 (58%), Positives = 26/36 (72%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+IDEKD++ R SGPGGQ V T++ V LTHIPT
Sbjct: 231 EIDEKDLRVDVFRASGPGGQGVNTTDSAVRLTHIPT 266
>gi|451846562|gb|EMD59871.1| hypothetical protein COCSADRAFT_40352 [Cochliobolus sativus
ND90Pr]
Length = 183
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 25/33 (75%)
Query: 30 EKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
E D+ E F++GSGPGGQ + KT++ V L HIPT
Sbjct: 45 ESDLIENFLKGSGPGGQKINKTSSAVQLKHIPT 77
>gi|424864042|ref|ZP_18287949.1| peptide chain release factor 2 [SAR86 cluster bacterium SAR86B]
gi|400759902|gb|EJP74080.1| peptide chain release factor 2 [SAR86 cluster bacterium SAR86B]
Length = 365
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 28/58 (48%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S AS +F ++D S I DI+ R SG GGQ V KT++ V LTHIPT
Sbjct: 212 RRHTSFAS-VFISPEIDDSIEINISNADIRTDTYRASGAGGQHVNKTDSAVRLTHIPT 268
>gi|326803667|ref|YP_004321485.1| peptide chain release factor 1 [Aerococcus urinae ACS-120-V-Col10a]
gi|326651316|gb|AEA01499.1| peptide chain release factor 1 [Aerococcus urinae ACS-120-V-Col10a]
Length = 360
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 24/44 (54%), Positives = 30/44 (68%), Gaps = 4/44 (9%)
Query: 19 DLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
DLD+ +IDEKDI+ R SG GGQ V KT++ V +THIPT
Sbjct: 211 DLDF----EIDEKDIRTDIYRASGAGGQHVNKTSSAVRMTHIPT 250
>gi|376295313|ref|YP_005166543.1| Peptide chain release factor 2 [Desulfovibrio desulfuricans ND132]
gi|323457874|gb|EGB13739.1| Peptide chain release factor 2 [Desulfovibrio desulfuricans ND132]
Length = 372
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 25/58 (43%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S AS D+D + ++ ++D++ R SGPGGQ+V KT++ V +THIPT
Sbjct: 212 RRHTSFASVDVYP-DMDENIEIEVKDEDLRIDTFRSSGPGGQSVNKTSSAVRITHIPT 268
>gi|347736698|ref|ZP_08869272.1| peptide chain release factor 2 PrfB [Azospirillum amazonense Y2]
gi|346919737|gb|EGY01135.1| peptide chain release factor 2 PrfB [Azospirillum amazonense Y2]
Length = 319
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 27/58 (46%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S SS+ +D V +I+EKD++ R SG GGQ V KT++ V LTH+PT
Sbjct: 156 RRHTSF-SSVSVTPVIDDKIVVEINEKDVRVDTYRASGAGGQHVNKTDSAVRLTHMPT 212
>gi|261196175|ref|XP_002624491.1| conserved hypothetical protein [Ajellomyces dermatitidis
SLH14081]
gi|239587624|gb|EEQ70267.1| conserved hypothetical protein [Ajellomyces dermatitidis
SLH14081]
Length = 196
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 18/37 (48%), Positives = 27/37 (72%)
Query: 26 PKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
PK+D ++ +++G+GPGGQA+ KTN+ V L H PT
Sbjct: 35 PKLDPSEVTGSYLKGTGPGGQAINKTNSAVQLIHKPT 71
>gi|406860457|gb|EKD13515.1| peptidyl-tRNA hydrolase domain protein [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 134
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 26/35 (74%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+DE + E F++GSGPGGQ + KT++ V L H+PT
Sbjct: 8 VDESEFTEVFLKGSGPGGQKINKTSSAVQLKHLPT 42
>gi|68067771|ref|XP_675820.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|68077037|ref|XP_680438.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56495222|emb|CAI02598.1| conserved hypothetical protein [Plasmodium berghei]
gi|56501376|emb|CAI04754.1| hypothetical protein PB001267.02.0 [Plasmodium berghei]
Length = 147
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 36/56 (64%), Gaps = 2/56 (3%)
Query: 10 LASSLFRKYDLDYSKVPKID--EKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTD 63
L +SL K D+ K+ I K+I+E F++G+G GGQ V KTNNCV++ + T+
Sbjct: 5 LKNSLNDKLDIINKKLQDIGICPKNIEETFIKGTGKGGQKVNKTNNCVMIKYDRTN 60
>gi|226293278|gb|EEH48698.1| hypothetical protein PADG_04777 [Paracoccidioides brasiliensis
Pb18]
Length = 177
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 27/37 (72%)
Query: 26 PKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
PK++ ++ +++GSGPGGQA+ KTN+ V L H PT
Sbjct: 42 PKLNPAEVTGTYLKGSGPGGQAINKTNSAVQLIHKPT 78
>gi|88657945|ref|YP_507408.1| peptide chain release factor 1 [Ehrlichia chaffeensis str.
Arkansas]
gi|119361539|sp|Q2GGM5.1|RF1_EHRCR RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|88599402|gb|ABD44871.1| peptide chain release factor 1 [Ehrlichia chaffeensis str.
Arkansas]
Length = 359
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/36 (55%), Positives = 27/36 (75%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
KIDEKD++ R SGPGGQ+V T++ V +THIP+
Sbjct: 216 KIDEKDLRIDVYRSSGPGGQSVNTTDSAVRITHIPS 251
>gi|256545449|ref|ZP_05472811.1| peptide chain release factor 2, programmed [Anaerococcus vaginalis
ATCC 51170]
gi|256398845|gb|EEU12460.1| peptide chain release factor 2, programmed [Anaerococcus vaginalis
ATCC 51170]
Length = 369
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 28/59 (47%), Positives = 37/59 (62%), Gaps = 3/59 (5%)
Query: 5 RRHLSLAS-SLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S AS +F + + D S +ID KD++ R SG GGQ V KT++ V +THIPT
Sbjct: 213 RRHTSFASVDIFPELNDDMSV--EIDPKDLRIDTYRASGAGGQHVNKTDSAVRITHIPT 269
>gi|182414215|ref|YP_001819281.1| class I peptide chain release factor [Opitutus terrae PB90-1]
gi|177841429|gb|ACB75681.1| Class I peptide chain release factor [Opitutus terrae PB90-1]
Length = 131
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/32 (59%), Positives = 25/32 (78%)
Query: 31 KDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+++ ERFVRGSGPGGQ + KT++ V L H PT
Sbjct: 19 EEVDERFVRGSGPGGQKINKTSSTVWLRHGPT 50
>gi|73667063|ref|YP_303079.1| class I peptide chain release factor domain-containing protein
[Ehrlichia canis str. Jake]
gi|72394204|gb|AAZ68481.1| Class I peptide chain release factor domain [Ehrlichia canis str.
Jake]
Length = 173
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/36 (55%), Positives = 27/36 (75%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
KIDEKD++ R SGPGGQ+V T++ V +THIP+
Sbjct: 41 KIDEKDLRIDVYRSSGPGGQSVNTTDSAVRITHIPS 76
>gi|73667064|ref|YP_303080.1| peptide chain release factor 1 [Ehrlichia canis str. Jake]
gi|119361538|sp|Q3YS23.1|RF1_EHRCJ RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|72394205|gb|AAZ68482.1| bacterial peptide chain release factor 1 (bRF-1) [Ehrlichia canis
str. Jake]
Length = 359
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/36 (55%), Positives = 27/36 (75%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
KIDEKD++ R SGPGGQ+V T++ V +THIP+
Sbjct: 216 KIDEKDLRIDVYRSSGPGGQSVNTTDSAVRITHIPS 251
>gi|57239178|ref|YP_180314.1| peptide chain release factor 1 [Ehrlichia ruminantium str.
Welgevonden]
gi|58579136|ref|YP_197348.1| peptide chain release factor 1 [Ehrlichia ruminantium str.
Welgevonden]
gi|58617189|ref|YP_196388.1| peptide chain release factor 1 [Ehrlichia ruminantium str. Gardel]
gi|75432752|sp|Q5FGZ2.1|RF1_EHRRG RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|81557311|sp|Q5HB80.1|RF1_EHRRW RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|57161257|emb|CAH58178.1| peptide release factor 1 [Ehrlichia ruminantium str. Welgevonden]
gi|58416801|emb|CAI27914.1| Peptide chain release factor 1 (RF-1) [Ehrlichia ruminantium str.
Gardel]
gi|58417762|emb|CAI26966.1| Peptide chain release factor 1 (RF-1) [Ehrlichia ruminantium str.
Welgevonden]
Length = 359
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/36 (55%), Positives = 27/36 (75%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
KIDEKD++ R SGPGGQ+V T++ V +THIP+
Sbjct: 216 KIDEKDLRIDVYRSSGPGGQSVNTTDSAVRITHIPS 251
>gi|118581341|ref|YP_902591.1| class I peptide chain release factor [Pelobacter propionicus DSM
2379]
gi|118504051|gb|ABL00534.1| Class I peptide chain release factor [Pelobacter propionicus DSM
2379]
Length = 117
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 27/35 (77%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+ E+D++E+FVR SG GGQ V KT++ V L HIP+
Sbjct: 23 VREEDLEEQFVRSSGSGGQHVNKTSSSVFLRHIPS 57
>gi|325849490|ref|ZP_08170771.1| peptide chain release factor 2 [Anaerococcus hydrogenalis
ACS-025-V-Sch4]
gi|325480110|gb|EGC83185.1| peptide chain release factor 2 [Anaerococcus hydrogenalis
ACS-025-V-Sch4]
Length = 369
Score = 45.8 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 28/59 (47%), Positives = 37/59 (62%), Gaps = 3/59 (5%)
Query: 5 RRHLSLAS-SLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S AS +F + + D S +ID KD++ R SG GGQ V KT++ V +THIPT
Sbjct: 213 RRHTSFASIDIFPELNDDMSV--EIDPKDLRIDTYRASGAGGQHVNKTDSAVRITHIPT 269
>gi|212697040|ref|ZP_03305168.1| hypothetical protein ANHYDRO_01605 [Anaerococcus hydrogenalis DSM
7454]
gi|212675815|gb|EEB35422.1| hypothetical protein ANHYDRO_01605 [Anaerococcus hydrogenalis DSM
7454]
Length = 238
Score = 45.8 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 28/59 (47%), Positives = 37/59 (62%), Gaps = 3/59 (5%)
Query: 5 RRHLSLAS-SLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S AS +F + + D S +ID KD++ R SG GGQ V KT++ V +THIPT
Sbjct: 83 RRHTSFASIDIFPELNDDMSV--EIDPKDLRIDTYRASGAGGQHVNKTDSAVRITHIPT 139
>gi|108804456|ref|YP_644393.1| peptide chain release factor 2 [Rubrobacter xylanophilus DSM 9941]
gi|108765699|gb|ABG04581.1| bacterial peptide chain release factor 2 (bRF-2) [Rubrobacter
xylanophilus DSM 9941]
Length = 366
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 27/58 (46%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S AS D +V +IDEKD++ R SG GGQ V KT++ V +TH+PT
Sbjct: 207 RRHTSFASVAVAPAIDDAVEV-EIDEKDLKVDTYRASGAGGQHVNKTDSAVRITHLPT 263
>gi|189196084|ref|XP_001934380.1| peptidyl-tRNA hydrolase domain containing protein [Pyrenophora
tritici-repentis Pt-1C-BFP]
gi|187980259|gb|EDU46885.1| peptidyl-tRNA hydrolase domain containing protein [Pyrenophora
tritici-repentis Pt-1C-BFP]
Length = 175
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 37/65 (56%), Gaps = 4/65 (6%)
Query: 1 MSIFRRHLSLASSLFRKYDLDYSKVPK---IDEKDIQERFVRGSGPGGQAVAKTNNCVVL 57
M IF R L L L + L +P + + D+ E F++GSGPGGQ + KT++ V L
Sbjct: 1 MRIFAR-LPLHRPLHTSHPLLSKSLPPRVPLPDSDLIENFLKGSGPGGQKINKTSSAVQL 59
Query: 58 THIPT 62
HIPT
Sbjct: 60 KHIPT 64
>gi|331695045|ref|YP_004331284.1| peptide chain release factor 2 [Pseudonocardia dioxanivorans
CB1190]
gi|326949734|gb|AEA23431.1| Peptide chain release factor 2 [Pseudonocardia dioxanivorans
CB1190]
Length = 369
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 21/35 (60%), Positives = 25/35 (71%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
IDEKD++ R SGPGGQ V T++ V LTHIPT
Sbjct: 232 IDEKDLRVDVYRSSGPGGQGVNTTDSAVRLTHIPT 266
>gi|154277694|ref|XP_001539684.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150413269|gb|EDN08652.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 187
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 27/37 (72%)
Query: 26 PKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
PK+D ++ +++G+GPGGQA+ KTN+ V L H PT
Sbjct: 35 PKLDLSEVTGSYLKGTGPGGQAINKTNSAVQLIHKPT 71
>gi|340781058|ref|YP_004747665.1| peptide chain release factor 2 [Acidithiobacillus caldus SM-1]
gi|340555211|gb|AEK56965.1| peptide chain release factor 2 [Acidithiobacillus caldus SM-1]
Length = 349
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 27/58 (46%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S AS +F ++D S +I+ D++ R SG GGQ V KT++ V LTHIPT
Sbjct: 196 RRHTSFAS-VFVYPEIDDSFEIEINPADLKVDTYRASGAGGQHVNKTDSAVRLTHIPT 252
>gi|255020528|ref|ZP_05292592.1| peptide chain release factor 2 [Acidithiobacillus caldus ATCC
51756]
gi|254970048|gb|EET27546.1| peptide chain release factor 2 [Acidithiobacillus caldus ATCC
51756]
Length = 349
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 27/58 (46%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S AS +F ++D S +I+ D++ R SG GGQ V KT++ V LTHIPT
Sbjct: 196 RRHTSFAS-VFVYPEIDDSFEIEINPADLKVDTYRASGAGGQHVNKTDSAVRLTHIPT 252
>gi|225683891|gb|EEH22175.1| predicted protein [Paracoccidioides brasiliensis Pb03]
Length = 247
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 27/37 (72%)
Query: 26 PKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
PK++ ++ +++GSGPGGQA+ KTN+ V L H PT
Sbjct: 114 PKLNPAEVTGTYLKGSGPGGQAINKTNSAVQLIHKPT 150
>gi|222053782|ref|YP_002536144.1| class I peptide chain release factor [Geobacter daltonii FRC-32]
gi|221563071|gb|ACM19043.1| Class I peptide chain release factor [Geobacter daltonii FRC-32]
Length = 139
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 25/35 (71%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+ E+D+ E+F+R SG GGQ V KT+ CV L H PT
Sbjct: 23 VREEDLDEQFIRSSGKGGQHVNKTSTCVYLRHRPT 57
>gi|375091094|ref|ZP_09737395.1| peptide chain release factor 2 [Helcococcus kunzii ATCC 51366]
gi|374564456|gb|EHR35749.1| peptide chain release factor 2 [Helcococcus kunzii ATCC 51366]
Length = 349
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 26/58 (44%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S AS ++D+ +IDEKD++ R SG GGQ V T++ V +THIPT
Sbjct: 192 RRHTSFASVDVYP-EIDHDTEIEIDEKDLRIDTYRSSGAGGQHVNTTDSAVRITHIPT 248
>gi|221052668|ref|XP_002261057.1| Polypeptide chain release factor 2 [Plasmodium knowlesi strain H]
gi|194247061|emb|CAQ38245.1| Polypeptide chain release factor 2, putative [Plasmodium knowlesi
strain H]
Length = 186
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 18/29 (62%), Positives = 24/29 (82%)
Query: 31 KDIQERFVRGSGPGGQAVAKTNNCVVLTH 59
KDI+E FV+G+G GGQ V KTNNCV++ +
Sbjct: 67 KDIEETFVKGTGKGGQKVNKTNNCVMIKY 95
>gi|374587319|ref|ZP_09660411.1| bacterial peptide chain release factor 2 (bRF-2) [Leptonema illini
DSM 21528]
gi|373876180|gb|EHQ08174.1| bacterial peptide chain release factor 2 (bRF-2) [Leptonema illini
DSM 21528]
Length = 391
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 27/58 (46%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S AS +LD S I+EKD++ R SG GGQ V KT++ + +THIPT
Sbjct: 224 RRHTSFASVHISP-ELDDSVNVLIEEKDLRVDTYRASGAGGQHVNKTDSAIRITHIPT 280
>gi|340914850|gb|EGS18191.1| putative translation release factor [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 231
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 19/33 (57%), Positives = 25/33 (75%)
Query: 30 EKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
E +I+E F++GSGPGGQ + KTN+ V L H PT
Sbjct: 86 ESEIEESFLKGSGPGGQKINKTNSAVQLRHTPT 118
>gi|68171785|ref|ZP_00545129.1| Peptide chain release factor 1 [Ehrlichia chaffeensis str. Sapulpa]
gi|67998796|gb|EAM85504.1| Peptide chain release factor 1 [Ehrlichia chaffeensis str. Sapulpa]
Length = 311
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/36 (55%), Positives = 27/36 (75%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
KIDEKD++ R SGPGGQ+V T++ V +THIP+
Sbjct: 168 KIDEKDLRIDVYRSSGPGGQSVNTTDSAVRITHIPS 203
>gi|433602857|ref|YP_007035226.1| Peptide chain release factor 2 [Saccharothrix espanaensis DSM
44229]
gi|407880710|emb|CCH28353.1| Peptide chain release factor 2 [Saccharothrix espanaensis DSM
44229]
Length = 365
Score = 45.4 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 21/35 (60%), Positives = 25/35 (71%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
IDEKD++ R SGPGGQ V T++ V LTHIPT
Sbjct: 232 IDEKDLRVDVYRSSGPGGQGVNTTDSAVRLTHIPT 266
>gi|345560671|gb|EGX43796.1| hypothetical protein AOL_s00215g532 [Arthrobotrys oligospora ATCC
24927]
Length = 234
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 37/66 (56%), Gaps = 12/66 (18%)
Query: 6 RHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGG---------QAVAKTNNCVV 56
R LS + LF+K PK+DE DI+E+F++GSGPG + KT++ V
Sbjct: 31 RPLSSTTLLFKK---QMPPRPKVDENDIEEKFLKGSGPGMVFPHDADYIEEQNKTSSAVQ 87
Query: 57 LTHIPT 62
L HIPT
Sbjct: 88 LRHIPT 93
>gi|410663249|ref|YP_006915620.1| peptide chain release factor 2 [Simiduia agarivorans SA1 = DSM
21679]
gi|409025606|gb|AFU97890.1| peptide chain release factor 2 [Simiduia agarivorans SA1 = DSM
21679]
Length = 248
Score = 45.4 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 25/60 (41%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTDS 64
RRH S SS+F ++D + I+ D++ R SG GGQ V KT++ V LTH+PT++
Sbjct: 95 RRHTSF-SSVFVSPEIDDNFEIDINPADVRTDTYRASGAGGQHVNKTDSAVRLTHVPTNT 153
>gi|442805591|ref|YP_007373740.1| peptide chain release factor 2 [Clostridium stercorarium subsp.
stercorarium DSM 8532]
gi|442741441|gb|AGC69130.1| peptide chain release factor 2 [Clostridium stercorarium subsp.
stercorarium DSM 8532]
Length = 339
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 27/58 (46%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S AS D ++ ID +DI+ R SG GGQ V KT++ V LTHIPT
Sbjct: 183 RRHTSFASMEVLPVMNDSDEI-HIDPEDIKMDVFRASGAGGQHVNKTSSAVRLTHIPT 239
>gi|78485070|ref|YP_390995.1| peptide chain release factor 2 [Thiomicrospira crunogena XCL-2]
gi|78363356|gb|ABB41321.1| bacterial peptide chain release factor 2 (bRF-2) [Thiomicrospira
crunogena XCL-2]
Length = 332
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 25/60 (41%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTDS 64
RRH S AS +F ++D S +I+ D++ R SG GGQ V KT + V +TH+PT++
Sbjct: 179 RRHTSFAS-VFISPEIDDSFEVEINPADLRIDVYRASGAGGQHVNKTESAVRITHLPTNT 237
>gi|242279065|ref|YP_002991194.1| hypothetical protein Desal_1593 [Desulfovibrio salexigens DSM 2638]
gi|242121959|gb|ACS79655.1| hypothetical protein Desal_1593 [Desulfovibrio salexigens DSM 2638]
Length = 372
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 25/60 (41%), Positives = 37/60 (61%), Gaps = 3/60 (5%)
Query: 5 RRHLSLAS-SLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTD 63
RRH S AS ++ + D ++ ++DI+ R SGPGGQ V KTN+ V +TH+PT+
Sbjct: 212 RRHTSFASVDVYPEISQDIEI--EVKDEDIRLDVFRASGPGGQHVNKTNSAVRITHLPTN 269
>gi|119715500|ref|YP_922465.1| peptide chain release factor 2 [Nocardioides sp. JS614]
gi|119536161|gb|ABL80778.1| bacterial peptide chain release factor 2 (bRF-2) [Nocardioides sp.
JS614]
Length = 375
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 20/36 (55%), Positives = 25/36 (69%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+IDE DI+ R GPGGQ+V T++ V LTHIPT
Sbjct: 235 EIDENDIRTDVFRSGGPGGQSVNTTDSAVRLTHIPT 270
>gi|72386553|ref|XP_843701.1| peptide chain release factor 1 [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
gi|62175752|gb|AAX69880.1| peptide chain release factor 1, putative [Trypanosoma brucei]
gi|70800233|gb|AAZ10142.1| peptide chain release factor 1, putative [Trypanosoma brucei brucei
strain 927/4 GUTat10.1]
Length = 459
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 24/35 (68%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+ EKD FVRGSGPGGQ + ++N V LTH P+
Sbjct: 306 VHEKDCNIEFVRGSGPGGQGMQSSSNAVCLTHKPS 340
>gi|257459323|ref|ZP_05624436.1| peptide chain release factor 2 [Campylobacter gracilis RM3268]
gi|257443252|gb|EEV18382.1| peptide chain release factor 2 [Campylobacter gracilis RM3268]
Length = 365
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 26/58 (44%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S SS+ +L+ I+EKDI+ R SG GGQ + KT + V +THIPT
Sbjct: 211 RRHTSF-SSVMVSPELNDDIEINIEEKDIRVDVFRASGAGGQHINKTESAVRITHIPT 267
>gi|114569792|ref|YP_756472.1| class I peptide chain release factor [Maricaulis maris MCS10]
gi|114340254|gb|ABI65534.1| Class I peptide chain release factor [Maricaulis maris MCS10]
Length = 139
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 23/30 (76%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVL 57
IDE +I+ERF+R SGPGGQ V KT + V L
Sbjct: 9 IDEAEIEERFIRASGPGGQHVNKTESAVQL 38
>gi|91775149|ref|YP_544905.1| peptide chain release factor 2 [Methylobacillus flagellatus KT]
gi|91709136|gb|ABE49064.1| bacterial peptide chain release factor 2 (bRF-2) [Methylobacillus
flagellatus KT]
Length = 354
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 39/60 (65%), Gaps = 1/60 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTDS 64
RRH S AS +F ++D S V +I+ D++ R SG GGQ + KT++ V +TH+PT++
Sbjct: 201 RRHTSFAS-VFVYPEVDDSIVVEINPADLRIDTYRASGAGGQHINKTDSAVRITHLPTNT 259
>gi|406601462|emb|CCH46912.1| Peptide chain release factor 1 [Wickerhamomyces ciferrii]
Length = 397
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 24/35 (68%)
Query: 26 PKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHI 60
P IDE + E F++G GPGGQ + KTN+ V L HI
Sbjct: 151 PTIDESEFTEVFIKGGGPGGQKINKTNSKVQLKHI 185
>gi|149245034|ref|XP_001527051.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
gi|146449445|gb|EDK43701.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
Length = 172
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/36 (55%), Positives = 28/36 (77%), Gaps = 1/36 (2%)
Query: 28 IDEKDIQERFVRG-SGPGGQAVAKTNNCVVLTHIPT 62
I+E +++E+F+ G SGPGGQ + KTN+ V LTH PT
Sbjct: 32 INEDELEEKFLHGGSGPGGQKINKTNSKVQLTHKPT 67
>gi|169597527|ref|XP_001792187.1| hypothetical protein SNOG_01549 [Phaeosphaeria nodorum SN15]
gi|160707538|gb|EAT91198.2| hypothetical protein SNOG_01549 [Phaeosphaeria nodorum SN15]
Length = 236
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 21/39 (53%), Positives = 29/39 (74%), Gaps = 1/39 (2%)
Query: 24 KVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+VP + + DI E+F+ GSGPGGQ + KT++ V L HIPT
Sbjct: 38 RVP-LPDSDIIEKFLHGSGPGGQKINKTSSAVQLKHIPT 75
>gi|354543716|emb|CCE40438.1| hypothetical protein CPAR2_104740 [Candida parapsilosis]
Length = 177
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/36 (55%), Positives = 27/36 (75%), Gaps = 1/36 (2%)
Query: 28 IDEKDIQERFVRGS-GPGGQAVAKTNNCVVLTHIPT 62
I E++I+E F++G GPGGQ + KTN+ V LTH PT
Sbjct: 32 IKEEEIEESFIKGGRGPGGQKINKTNSKVQLTHKPT 67
>gi|82539988|ref|XP_724342.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23478956|gb|EAA15907.1| hypothetical protein [Plasmodium yoelii yoelii]
Length = 172
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 36/56 (64%), Gaps = 2/56 (3%)
Query: 10 LASSLFRKYDLDYSKVPKID--EKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTD 63
L +SL K D+ K+ I K+I+E F++G+G GGQ V KTNNCV++ + T+
Sbjct: 52 LKNSLNDKLDIINKKLQDIGICPKNIEETFIKGTGKGGQKVNKTNNCVMIKYDRTN 107
>gi|224369062|ref|YP_002603226.1| hypothetical protein HRM2_19610 [Desulfobacterium autotrophicum
HRM2]
gi|223691779|gb|ACN15062.1| hypothetical protein HRM2_19610 [Desulfobacterium autotrophicum
HRM2]
Length = 118
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 27/35 (77%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
I++ DI+E+FV+GSG GGQ V KT+ V L H+PT
Sbjct: 21 INKADIEEKFVKGSGRGGQKVNKTSVAVFLRHLPT 55
>gi|330941932|ref|XP_003306099.1| hypothetical protein PTT_19132 [Pyrenophora teres f. teres 0-1]
gi|311316572|gb|EFQ85807.1| hypothetical protein PTT_19132 [Pyrenophora teres f. teres 0-1]
Length = 205
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 29/39 (74%), Gaps = 1/39 (2%)
Query: 24 KVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+VP + + D+ E F++GSGPGGQ + KT++ V L HIPT
Sbjct: 22 RVP-LPDSDLIENFLKGSGPGGQKINKTSSAVQLKHIPT 59
>gi|449136635|ref|ZP_21772010.1| peptide chain release factor 2 [Rhodopirellula europaea 6C]
gi|448884728|gb|EMB15205.1| peptide chain release factor 2 [Rhodopirellula europaea 6C]
Length = 337
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 21/46 (45%), Positives = 32/46 (69%)
Query: 19 DLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTDS 64
++D S I++KD++E R SG GGQ V KT++ + LTHIPT++
Sbjct: 183 EIDDSIEVNIEKKDVREDTYRASGAGGQHVNKTDSAIRLTHIPTNT 228
>gi|320355124|ref|YP_004196463.1| peptide chain release factor 2 (bRF-2) [Desulfobulbus propionicus
DSM 2032]
gi|320123626|gb|ADW19172.1| bacterial peptide chain release factor 2 (bRF-2) [Desulfobulbus
propionicus DSM 2032]
Length = 369
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 25/58 (43%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S AS + +LD +I++KDI+ R SG GGQ V KT++ + +TH PT
Sbjct: 215 RRHTSFASVMVMP-ELDDDVEIEINDKDIRIDTYRASGSGGQHVNKTDSAIRITHFPT 271
>gi|343924877|ref|ZP_08764414.1| peptide chain release factor 2 [Gordonia alkanivorans NBRC 16433]
gi|343765223|dbj|GAA11340.1| peptide chain release factor 2 [Gordonia alkanivorans NBRC 16433]
Length = 373
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 20/35 (57%), Positives = 25/35 (71%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+DE DI+ R SGPGGQ+V T++ V LTHIPT
Sbjct: 237 VDENDIKVDVYRSSGPGGQSVNTTDSAVRLTHIPT 271
>gi|404257492|ref|ZP_10960817.1| peptide chain release factor 2 [Gordonia namibiensis NBRC 108229]
gi|403403887|dbj|GAB99226.1| peptide chain release factor 2 [Gordonia namibiensis NBRC 108229]
Length = 373
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 20/35 (57%), Positives = 25/35 (71%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+DE DI+ R SGPGGQ+V T++ V LTHIPT
Sbjct: 237 VDENDIKVDVYRSSGPGGQSVNTTDSAVRLTHIPT 271
>gi|152991276|ref|YP_001356998.1| peptide chain release factor 2 [Nitratiruptor sp. SB155-2]
gi|166225114|sp|A6Q582.1|RF2_NITSB RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|151423137|dbj|BAF70641.1| peptide chain release factor 2 [Nitratiruptor sp. SB155-2]
Length = 368
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 27/59 (45%), Positives = 37/59 (62%), Gaps = 3/59 (5%)
Query: 5 RRHLSLASSLFR-KYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S AS + + D D + V I++KDI+ R SG GGQ V KT++ + +THIPT
Sbjct: 211 RRHTSFASVMVSPEVDDDINIV--IEDKDIRVDTYRASGAGGQHVNKTDSAIRITHIPT 267
>gi|255994191|ref|ZP_05427326.1| peptide chain release factor 2 [Eubacterium saphenum ATCC 49989]
gi|255993859|gb|EEU03948.1| peptide chain release factor 2 [Eubacterium saphenum ATCC 49989]
Length = 320
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 26/58 (44%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S AS ++ KV KID+KD++ R SG GGQ V KT++ V + H+PT
Sbjct: 163 RRHTSFASVDVIP-EIKTDKVIKIDDKDLRIDKFRASGAGGQHVNKTDSAVRIIHLPT 219
>gi|407277743|ref|ZP_11106213.1| peptide chain release factor 2 [Rhodococcus sp. P14]
Length = 374
Score = 44.7 bits (104), Expect = 0.008, Method: Composition-based stats.
Identities = 20/35 (57%), Positives = 25/35 (71%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+DE DI+ R SGPGGQ+V T++ V LTHIPT
Sbjct: 235 VDENDIRVDVYRSSGPGGQSVNTTDSAVRLTHIPT 269
>gi|409390739|ref|ZP_11242451.1| peptide chain release factor 2 [Gordonia rubripertincta NBRC
101908]
gi|403199116|dbj|GAB85685.1| peptide chain release factor 2 [Gordonia rubripertincta NBRC
101908]
Length = 373
Score = 44.7 bits (104), Expect = 0.008, Method: Composition-based stats.
Identities = 20/35 (57%), Positives = 25/35 (71%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+DE DI+ R SGPGGQ+V T++ V LTHIPT
Sbjct: 237 VDENDIKVDVYRSSGPGGQSVNTTDSAVRLTHIPT 271
>gi|345562081|gb|EGX45153.1| hypothetical protein AOL_s00173g254 [Arthrobotrys oligospora ATCC
24927]
Length = 434
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 29/46 (63%)
Query: 17 KYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+Y D + +ID KD++ +R SG GGQ V +T + V +THIPT
Sbjct: 268 EYGTDDDPLAQIDMKDVKTDVMRASGAGGQHVNRTESAVRMTHIPT 313
>gi|343473565|emb|CCD14577.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 474
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 24/35 (68%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
I E+D FVRGSGPGGQ + ++N V LTH P+
Sbjct: 291 IHEEDCNIEFVRGSGPGGQGMQSSSNAVCLTHRPS 325
>gi|363419407|ref|ZP_09307508.1| peptide chain release factor 2 [Rhodococcus pyridinivorans AK37]
gi|359737492|gb|EHK86424.1| peptide chain release factor 2 [Rhodococcus pyridinivorans AK37]
Length = 372
Score = 44.7 bits (104), Expect = 0.008, Method: Composition-based stats.
Identities = 20/35 (57%), Positives = 25/35 (71%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
IDE D++ R SGPGGQ+V T++ V LTHIPT
Sbjct: 235 IDENDVRVDVYRSSGPGGQSVNTTDSAVRLTHIPT 269
>gi|295798158|emb|CAX69014.1| peptide chain release factor class A (=1), fragment [uncultured
bacterium]
Length = 170
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 18/32 (56%), Positives = 22/32 (68%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTH 59
I E D++ERFVR GPGGQ + K + CV L H
Sbjct: 53 IREPDLEERFVRSRGPGGQNINKVSTCVYLKH 84
>gi|342180140|emb|CCC89616.1| putative peptide chain release factor 1 [Trypanosoma congolense
IL3000]
Length = 444
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 24/35 (68%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
I E+D FVRGSGPGGQ + ++N V LTH P+
Sbjct: 291 IHEEDCNIEFVRGSGPGGQGMQSSSNAVCLTHRPS 325
>gi|404216093|ref|YP_006670288.1| Protein chain release factor B [Gordonia sp. KTR9]
gi|403646892|gb|AFR50132.1| Protein chain release factor B [Gordonia sp. KTR9]
Length = 371
Score = 44.7 bits (104), Expect = 0.008, Method: Composition-based stats.
Identities = 20/35 (57%), Positives = 25/35 (71%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+DE DI+ R SGPGGQ+V T++ V LTHIPT
Sbjct: 235 VDENDIKVDVYRSSGPGGQSVNTTDSAVRLTHIPT 269
>gi|377572554|ref|ZP_09801639.1| peptide chain release factor 2 [Gordonia terrae NBRC 100016]
gi|377530326|dbj|GAB46804.1| peptide chain release factor 2 [Gordonia terrae NBRC 100016]
Length = 371
Score = 44.7 bits (104), Expect = 0.008, Method: Composition-based stats.
Identities = 20/35 (57%), Positives = 25/35 (71%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+DE DI+ R SGPGGQ+V T++ V LTHIPT
Sbjct: 235 VDENDIKVDVYRSSGPGGQSVNTTDSAVRLTHIPT 269
>gi|453077037|ref|ZP_21979799.1| peptide chain release factor 2 [Rhodococcus triatomae BKS 15-14]
gi|452760158|gb|EME18500.1| peptide chain release factor 2 [Rhodococcus triatomae BKS 15-14]
Length = 367
Score = 44.3 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 20/35 (57%), Positives = 25/35 (71%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
IDE D++ R SGPGGQ+V T++ V LTHIPT
Sbjct: 231 IDENDVRVDVYRSSGPGGQSVNTTDSAVRLTHIPT 265
>gi|392574783|gb|EIW67918.1| hypothetical protein TREMEDRAFT_63806 [Tremella mesenterica DSM
1558]
Length = 394
Score = 44.3 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 23/58 (39%), Positives = 31/58 (53%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
R H S A+ + D P +D KD++ +R G GGQ V KT + V LTH+PT
Sbjct: 222 RVHTSTAAVVILPIYPDLPDAPLVDPKDVKTEVMRSRGAGGQHVNKTESAVRLTHLPT 279
>gi|389736450|ref|ZP_10190000.1| peptide chain release factor 2 [Rhodanobacter sp. 115]
gi|388439329|gb|EIL95917.1| peptide chain release factor 2 [Rhodanobacter sp. 115]
Length = 257
Score = 44.3 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 25/60 (41%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTDS 64
RRH S +S+F ++D S I+ D++ R SG GGQ V KT + V +THIPT++
Sbjct: 95 RRHTSF-TSVFVSPEVDDSIEIDINPADLRTDVYRSSGAGGQHVNKTESAVRITHIPTNT 153
>gi|392373755|ref|YP_003205588.1| peptide chain release factor 2 (RF-2) [Candidatus Methylomirabilis
oxyfera]
gi|258591448|emb|CBE67749.1| Peptide chain release factor 2 (RF-2) [Candidatus Methylomirabilis
oxyfera]
Length = 334
Score = 44.3 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 25/59 (42%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTD 63
RRH S AS +F ++D + ID+KD++ R SG GGQ V T++ V +TH+PT+
Sbjct: 173 RRHTSFAS-VFVYPEIDETIDVAIDDKDLRIDTYRSSGAGGQHVNVTDSAVRITHLPTN 230
>gi|124267958|ref|YP_001021962.1| peptide chain release factor 2 [Methylibium petroleiphilum PM1]
gi|124260733|gb|ABM95727.1| bacterial peptide chain release factor 2 (bRF-2) [Methylibium
petroleiphilum PM1]
Length = 355
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 6 RHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RH S AS LF ++D S +I+ D++ R SG GGQ + KT++ V LTHIPT
Sbjct: 203 RHTSFAS-LFVYPEVDDSIEIEINPADVRTDTFRASGAGGQHINKTDSAVRLTHIPT 258
>gi|121595079|ref|YP_986975.1| peptide chain release factor 2 [Acidovorax sp. JS42]
gi|222111422|ref|YP_002553686.1| hypothetical protein Dtpsy_2248 [Acidovorax ebreus TPSY]
gi|229576664|sp|A1W9H4.1|RF2_ACISJ RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|254790913|sp|B9MBK7.1|RF2_DIAST RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|120607159|gb|ABM42899.1| bacterial peptide chain release factor 2 (bRF-2) [Acidovorax sp.
JS42]
gi|221730866|gb|ACM33686.1| conserved hypothetical protein [Acidovorax ebreus TPSY]
Length = 367
Score = 44.3 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 26/57 (45%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 6 RHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RH S AS LF ++D S I+ D++ R SG GGQ + KT++ V LTHIPT
Sbjct: 215 RHTSFAS-LFVYPEIDDSIEININPSDVRTDTYRASGAGGQHINKTDSAVRLTHIPT 270
>gi|156094577|ref|XP_001613325.1| hypothetical protein [Plasmodium vivax Sal-1]
gi|148802199|gb|EDL43598.1| hypothetical protein, conserved [Plasmodium vivax]
Length = 196
Score = 44.3 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 24/57 (42%), Positives = 35/57 (61%), Gaps = 2/57 (3%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKID--EKDIQERFVRGSGPGGQAVAKTNNCVVLTH 59
R L + S K++L K+ I KDI+E F++G+G GGQ V KTNNCV++ +
Sbjct: 49 RLRLHVNKSYQNKFELISKKLEGIGVFPKDIEETFIKGTGKGGQKVNKTNNCVMIRY 105
>gi|319762196|ref|YP_004126133.1| peptide chain release factor 2 [Alicycliphilus denitrificans BC]
gi|330825983|ref|YP_004389286.1| hypothetical protein Alide2_3440 [Alicycliphilus denitrificans
K601]
gi|317116757|gb|ADU99245.1| Peptide chain release factor 2 [Alicycliphilus denitrificans BC]
gi|329311355|gb|AEB85770.1| hypothetical protein Alide2_3440 [Alicycliphilus denitrificans
K601]
Length = 367
Score = 44.3 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 26/57 (45%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 6 RHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RH S AS LF ++D S I+ D++ R SG GGQ + KT++ V LTHIPT
Sbjct: 215 RHTSFAS-LFVYPEVDDSIEININPADVRTDTYRASGAGGQHINKTDSAVRLTHIPT 270
>gi|189485401|ref|YP_001956342.1| peptidyl-tRNA hydrolase-like protein [uncultured Termite group 1
bacterium phylotype Rs-D17]
gi|170287360|dbj|BAG13881.1| peptidyl-tRNA hydrolase-like protein [uncultured Termite group 1
bacterium phylotype Rs-D17]
Length = 136
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 24/36 (66%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
K+ E DI+E+F+R SG GGQ V K + V L H PT
Sbjct: 22 KVQESDIEEKFIRSSGKGGQNVNKVSTTVYLKHYPT 57
>gi|429859250|gb|ELA34038.1| peptidyl-trna hydrolase domain protein [Colletotrichum
gloeosporioides Nara gc5]
Length = 204
Score = 44.3 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 18/33 (54%), Positives = 26/33 (78%)
Query: 30 EKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+ DI+E +++GSGPGGQ + KT++ V L HIPT
Sbjct: 70 DSDIEESYLKGSGPGGQKINKTSSAVQLKHIPT 102
>gi|453383221|dbj|GAC82508.1| peptide chain release factor 2 [Gordonia paraffinivorans NBRC
108238]
Length = 373
Score = 44.3 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 20/35 (57%), Positives = 25/35 (71%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
IDE D++ R SGPGGQ+V T++ V LTHIPT
Sbjct: 237 IDENDLKVDVYRSSGPGGQSVNTTDSAVRLTHIPT 271
>gi|332525328|ref|ZP_08401493.1| hypothetical protein RBXJA2T_05833 [Rubrivivax benzoatilyticus JA2]
gi|332108602|gb|EGJ09826.1| hypothetical protein RBXJA2T_05833 [Rubrivivax benzoatilyticus JA2]
Length = 248
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 6 RHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RH S AS LF ++D S +I+ D++ R SG GGQ + KT++ V LTHIPT
Sbjct: 96 RHTSFAS-LFVYPEVDDSIEIEINPADVRTDTFRASGAGGQHINKTDSAVRLTHIPT 151
>gi|149927857|ref|ZP_01916108.1| peptide chain release factor 2 [Limnobacter sp. MED105]
gi|149823479|gb|EDM82710.1| peptide chain release factor 2 [Limnobacter sp. MED105]
Length = 304
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 6 RHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RH S AS LF ++D S +I+ D++ R SG GGQ + KT++ V LTHIPT
Sbjct: 152 RHTSFAS-LFVYPEVDDSFEIEINPADVRTDTYRASGAGGQHINKTDSAVRLTHIPT 207
>gi|340793648|ref|YP_004759111.1| peptide chain release factor RF-2 [Corynebacterium variabile DSM
44702]
gi|340533558|gb|AEK36038.1| peptide chain release factor RF-2 [Corynebacterium variabile DSM
44702]
Length = 377
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 20/35 (57%), Positives = 25/35 (71%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
IDE D++ R SGPGGQ+V T++ V LTHIPT
Sbjct: 238 IDENDVRVDVYRSSGPGGQSVNTTDSAVRLTHIPT 272
>gi|395008186|ref|ZP_10391871.1| peptide chain release factor 2 [Acidovorax sp. CF316]
gi|394313821|gb|EJE50786.1| peptide chain release factor 2 [Acidovorax sp. CF316]
Length = 299
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 26/57 (45%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 6 RHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RH S AS LF ++D S I+ D++ R SG GGQ + KT++ V LTHIPT
Sbjct: 147 RHTSFAS-LFVYPEIDDSIQIDINPSDVRTDTYRASGAGGQHINKTDSAVRLTHIPT 202
>gi|389714676|ref|ZP_10187249.1| peptide chain release factor 2 [Acinetobacter sp. HA]
gi|388609652|gb|EIM38799.1| peptide chain release factor 2 [Acinetobacter sp. HA]
Length = 310
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S S++F ++D + +I+ D++ R SG GGQ + KT++ V LTHIPT
Sbjct: 157 RRHTSF-SAVFVSPEVDDNIEIEINPSDVRTDTYRASGAGGQHINKTDSAVRLTHIPT 213
>gi|120610527|ref|YP_970205.1| peptide chain release factor 2 [Acidovorax citrulli AAC00-1]
gi|120588991|gb|ABM32431.1| bacterial peptide chain release factor 2 (bRF-2) [Acidovorax
citrulli AAC00-1]
Length = 300
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 6 RHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RH S AS LF ++D S I+ D++ R SG GGQ + KT++ V LTHIPT
Sbjct: 148 RHTSFAS-LFVYPEIDDSIEININPADVRTDTFRASGAGGQHINKTDSAVRLTHIPT 203
>gi|326316598|ref|YP_004234270.1| peptide chain release factor 2 [Acidovorax avenae subsp. avenae
ATCC 19860]
gi|323373434|gb|ADX45703.1| Peptide chain release factor 2 [Acidovorax avenae subsp. avenae
ATCC 19860]
Length = 367
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 6 RHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RH S AS LF ++D S I+ D++ R SG GGQ + KT++ V LTHIPT
Sbjct: 215 RHTSFAS-LFVYPEIDDSIEININPADVRTDTFRASGAGGQHINKTDSAVRLTHIPT 270
>gi|227486641|ref|ZP_03916957.1| peptide chain release factor RF2 [Anaerococcus lactolyticus ATCC
51172]
gi|227235353|gb|EEI85368.1| peptide chain release factor RF2 [Anaerococcus lactolyticus ATCC
51172]
Length = 329
Score = 44.3 bits (103), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 36/59 (61%), Gaps = 3/59 (5%)
Query: 5 RRHLSLAS-SLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S +S +F + D D S +ID D++ R SG GGQ V KT++ V +THIPT
Sbjct: 173 RRHTSFSSVDVFPELDEDTS--IEIDPSDLRIDTYRASGAGGQHVNKTDSAVRITHIPT 229
>gi|365096484|ref|ZP_09331076.1| hypothetical protein KYG_20198 [Acidovorax sp. NO-1]
gi|363413864|gb|EHL21053.1| hypothetical protein KYG_20198 [Acidovorax sp. NO-1]
Length = 248
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 6 RHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RH S AS LF ++D S I+ D++ R SG GGQ + KT++ V LTHIPT
Sbjct: 96 RHTSFAS-LFVYPEIDDSIEININPADVRTDTYRASGAGGQHINKTDSAVRLTHIPT 151
>gi|453049954|gb|EME97515.1| peptide chain release factor 2 [Streptomyces mobaraensis NBRC 13819
= DSM 40847]
Length = 368
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 20/36 (55%), Positives = 25/36 (69%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+IDE D++ R SGPGGQ V T++ V LTHIPT
Sbjct: 232 EIDESDLRVDVYRSSGPGGQGVNTTDSAVRLTHIPT 267
>gi|374313947|ref|YP_005060376.1| peptide chain release factor 2 [Serratia symbiotica str. 'Cinara
cedri']
gi|363988173|gb|AEW44364.1| peptide chain release factor 2 [Serratia symbiotica str. 'Cinara
cedri']
Length = 330
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTD 63
RRH S SS+F +LD + KI+ D++ R SG GGQ V KT + V +TH+PT+
Sbjct: 176 RRHTSF-SSVFIYPELDDNVDIKINSTDLRIDVYRASGAGGQHVNKTESAVRITHLPTN 233
>gi|256375089|ref|YP_003098749.1| peptide chain release factor 2 [Actinosynnema mirum DSM 43827]
gi|255919392|gb|ACU34903.1| peptide chain release factor 2 [Actinosynnema mirum DSM 43827]
Length = 367
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 20/36 (55%), Positives = 26/36 (72%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+IDEK+++ R SGPGGQ V T++ V LTHIPT
Sbjct: 231 EIDEKELRVDVYRSSGPGGQGVNTTDSAVRLTHIPT 266
>gi|241765770|ref|ZP_04763713.1| peptide chain release factor 2 [Acidovorax delafieldii 2AN]
gi|241364339|gb|EER59478.1| peptide chain release factor 2 [Acidovorax delafieldii 2AN]
Length = 300
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 26/57 (45%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 6 RHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RH S AS LF ++D S I+ D++ R SG GGQ + KT++ V LTHIPT
Sbjct: 148 RHTSFAS-LFVYPEIDDSIQIDINPADVRTDTYRASGAGGQHINKTDSAVRLTHIPT 203
>gi|312140591|ref|YP_004007927.1| peptide chain release factor prfb [Rhodococcus equi 103S]
gi|325675787|ref|ZP_08155471.1| peptide chain release factor RF2 [Rhodococcus equi ATCC 33707]
gi|311889930|emb|CBH49247.1| peptide chain release factor PrfB [Rhodococcus equi 103S]
gi|325553758|gb|EGD23436.1| peptide chain release factor RF2 [Rhodococcus equi ATCC 33707]
Length = 367
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 19/35 (54%), Positives = 25/35 (71%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
IDE D++ R SGPGGQ+V T++ V LTH+PT
Sbjct: 231 IDENDVRVDVYRSSGPGGQSVNTTDSAVRLTHVPT 265
>gi|261326766|emb|CBH09739.1| peptide chain release factor 1, putative [Trypanosoma brucei
gambiense DAL972]
Length = 459
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 24/35 (68%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+ E+D FVRGSGPGGQ + ++N V LTH P+
Sbjct: 306 VHERDCNIEFVRGSGPGGQGMQSSSNAVCLTHKPS 340
>gi|444915267|ref|ZP_21235402.1| Peptide chain release factor 2 [Cystobacter fuscus DSM 2262]
gi|444713682|gb|ELW54577.1| Peptide chain release factor 2 [Cystobacter fuscus DSM 2262]
Length = 319
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 29/44 (65%)
Query: 19 DLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
++D S I EKDI+ +F+RG G GGQ V KT++ L H+PT
Sbjct: 170 EVDDSIQIDIPEKDIELKFIRGGGAGGQKVNKTSSTAQLRHLPT 213
>gi|257054828|ref|YP_003132660.1| peptide chain release factor 2 [Saccharomonospora viridis DSM
43017]
gi|256584700|gb|ACU95833.1| bacterial peptide chain release factor 2 (bRF-2) [Saccharomonospora
viridis DSM 43017]
Length = 368
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 25/60 (41%), Positives = 36/60 (60%), Gaps = 5/60 (8%)
Query: 5 RRHLSLA--SSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RR S A L ++D+ ++P EKDI+ R SGPGGQ+V T++ V +TH+PT
Sbjct: 210 RRQTSFAHVEVLPEVEEIDHVEIP---EKDIRVDVYRSSGPGGQSVNTTDSAVRITHLPT 266
>gi|32474334|ref|NP_867328.1| peptide chain release factor 2 [Rhodopirellula baltica SH 1]
gi|417300696|ref|ZP_12087893.1| peptide chain release factor 2 [Rhodopirellula baltica WH47]
gi|421613631|ref|ZP_16054704.1| peptide chain release factor 2 [Rhodopirellula baltica SH28]
gi|440716673|ref|ZP_20897177.1| Peptide chain release factor 2 [Rhodopirellula baltica SWK14]
gi|32444872|emb|CAD74874.1| peptide chain release factor 2 (RF-2) [Rhodopirellula baltica SH 1]
gi|327543020|gb|EGF29467.1| peptide chain release factor 2 [Rhodopirellula baltica WH47]
gi|408495590|gb|EKK00176.1| peptide chain release factor 2 [Rhodopirellula baltica SH28]
gi|436438170|gb|ELP31730.1| Peptide chain release factor 2 [Rhodopirellula baltica SWK14]
Length = 337
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 20/46 (43%), Positives = 32/46 (69%)
Query: 19 DLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTDS 64
++D S +++KD++E R SG GGQ V KT++ + LTHIPT++
Sbjct: 183 EIDDSIEVNVEKKDVREDTYRASGAGGQHVNKTDSAIRLTHIPTNT 228
>gi|333915124|ref|YP_004488856.1| peptide chain release factor 2 [Delftia sp. Cs1-4]
gi|333745324|gb|AEF90501.1| Peptide chain release factor 2 [Delftia sp. Cs1-4]
Length = 367
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 25/57 (43%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 6 RHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RH S AS LF ++D S +I+ D++ R SG GGQ + KT++ V LTH+PT
Sbjct: 215 RHTSFAS-LFVYPEIDDSIQIEINPSDVRTDTYRASGAGGQHINKTDSAVRLTHMPT 270
>gi|237786018|ref|YP_002906723.1| peptide chain release factor 2 [Corynebacterium kroppenstedtii DSM
44385]
gi|237758930|gb|ACR18180.1| peptide chain release factor RF-2 [Corynebacterium kroppenstedtii
DSM 44385]
Length = 379
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 20/35 (57%), Positives = 25/35 (71%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
IDE D++ R SGPGGQ+V T++ V LTHIPT
Sbjct: 239 IDENDVRVDVYRSSGPGGQSVNTTDSAVRLTHIPT 273
>gi|264679119|ref|YP_003279026.1| peptide chain release factor 2 [Comamonas testosteroni CNB-2]
gi|262209632|gb|ACY33730.1| peptide chain release factor 2 [Comamonas testosteroni CNB-2]
Length = 299
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 6 RHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RH S SSLF ++D S I+ D++ R SG GGQ + KT++ V LTHIPT
Sbjct: 147 RHTSF-SSLFVYPEIDDSIEININPSDVRTDTYRASGAGGQHINKTDSAVRLTHIPT 202
>gi|338535949|ref|YP_004669283.1| peptide chain release factor 2 [Myxococcus fulvus HW-1]
gi|337262045|gb|AEI68205.1| peptide chain release factor 2 [Myxococcus fulvus HW-1]
Length = 302
Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 19/35 (54%), Positives = 25/35 (71%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
I EKDI+ +F+RG G GGQ V KT++ L H+PT
Sbjct: 161 IPEKDIELKFIRGGGAGGQKVNKTSSTAQLRHLPT 195
>gi|225374519|ref|ZP_03751740.1| hypothetical protein ROSEINA2194_00134 [Roseburia inulinivorans DSM
16841]
gi|225213757|gb|EEG96111.1| hypothetical protein ROSEINA2194_00134 [Roseburia inulinivorans DSM
16841]
Length = 358
Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 21/36 (58%), Positives = 25/36 (69%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+IDEKDI+ R SG GGQ V T++ V LTHIPT
Sbjct: 214 QIDEKDIRIDVCRASGAGGQCVNTTDSAVRLTHIPT 249
>gi|389808265|ref|ZP_10204675.1| peptide chain release factor 2 [Rhodanobacter thiooxydans LCS2]
gi|388443143|gb|EIL99302.1| peptide chain release factor 2 [Rhodanobacter thiooxydans LCS2]
Length = 329
Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 24/60 (40%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTDS 64
RRH S +S+F ++D S I+ D++ R SG GGQ V KT + V +TH+PT++
Sbjct: 167 RRHTSF-TSVFVSPEVDDSIEIDINPADLKTDVYRSSGAGGQHVNKTESAVRITHVPTNT 225
>gi|302524557|ref|ZP_07276899.1| peptide chain release factor 2 [Streptomyces sp. AA4]
gi|302433452|gb|EFL05268.1| peptide chain release factor 2 [Streptomyces sp. AA4]
Length = 376
Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 21/35 (60%), Positives = 25/35 (71%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
I EKDI+ R SGPGGQ+V T++ V LTHIPT
Sbjct: 241 IPEKDIRVDVYRSSGPGGQSVNTTDSAVRLTHIPT 275
>gi|441513034|ref|ZP_20994866.1| peptide chain release factor 2 [Gordonia amicalis NBRC 100051]
gi|441452015|dbj|GAC52827.1| peptide chain release factor 2 [Gordonia amicalis NBRC 100051]
Length = 371
Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 19/35 (54%), Positives = 25/35 (71%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+DE D++ R SGPGGQ+V T++ V LTHIPT
Sbjct: 235 VDENDVKVDVYRSSGPGGQSVNTTDSAVRLTHIPT 269
>gi|34496516|ref|NP_900731.1| peptide chain release factor 2 [Chromobacterium violaceum ATCC
12472]
gi|34102370|gb|AAQ58736.1| peptide chain release factor RF-2 [Chromobacterium violaceum ATCC
12472]
Length = 299
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S SS+F ++D S I+ D++ R SG GGQ + KT++ V LTHIPT
Sbjct: 146 RRHTSF-SSVFVYPEVDDSFEIDINPADVRTDTYRASGAGGQHINKTDSAVRLTHIPT 202
>gi|408792601|ref|ZP_11204211.1| peptide chain release factor 2 [Leptospira meyeri serovar Hardjo
str. Went 5]
gi|408464011|gb|EKJ87736.1| peptide chain release factor 2 [Leptospira meyeri serovar Hardjo
str. Went 5]
Length = 375
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S AS ++ ++D I+EKD++ R SG GGQ V T++ V +THIPT
Sbjct: 213 RRHTSFAS-VYVTPEVDDDIQVNIEEKDLRVDVYRSSGAGGQHVNTTDSAVRITHIPT 269
>gi|375107033|ref|ZP_09753294.1| peptide chain release factor 2 [Burkholderiales bacterium
JOSHI_001]
gi|374667764|gb|EHR72549.1| peptide chain release factor 2 [Burkholderiales bacterium
JOSHI_001]
Length = 367
Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 26/57 (45%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 6 RHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RH S AS LF ++D S I+ D++ R SG GGQ + KT++ V LTHIPT
Sbjct: 215 RHTSFAS-LFVYPEVDDSIEIDINPADVRTDTFRASGAGGQHINKTDSAVRLTHIPT 270
>gi|221066286|ref|ZP_03542391.1| peptide chain release factor 2 [Comamonas testosteroni KF-1]
gi|220711309|gb|EED66677.1| peptide chain release factor 2 [Comamonas testosteroni KF-1]
Length = 299
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 6 RHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RH S SSLF ++D S I+ D++ R SG GGQ + KT++ V LTHIPT
Sbjct: 147 RHTSF-SSLFVYPEIDDSIEININPSDVRTDTYRASGAGGQHINKTDSAVRLTHIPT 202
>gi|315499977|ref|YP_004088780.1| peptide chain release factor 2 [Asticcacaulis excentricus CB 48]
gi|315417989|gb|ADU14629.1| peptide chain release factor 2 [Asticcacaulis excentricus CB 48]
Length = 373
Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 26/58 (44%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S AS +D + V I+ D++ R SG GGQ V KT++ V LTHIPT
Sbjct: 210 RRHTSFASVWVYPV-VDDTIVIDINPADVRTDTYRASGAGGQHVNKTDSAVRLTHIPT 266
>gi|183219678|ref|YP_001837674.1| peptide chain release factor 2 [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Paris)']
gi|189909814|ref|YP_001961369.1| peptide chain release factor 2 [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Ames)']
gi|167774490|gb|ABZ92791.1| Peptide chain release factor 2 [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Ames)']
gi|167778100|gb|ABZ96398.1| Peptide chain release factor 2 [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Paris)']
Length = 375
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S AS ++ ++D I+EKD++ R SG GGQ V T++ V +THIPT
Sbjct: 213 RRHTSFAS-VYVTPEVDDDIQVNIEEKDLRVDVYRSSGAGGQHVNTTDSAVRITHIPT 269
>gi|398810951|ref|ZP_10569759.1| peptide chain release factor 2 [Variovorax sp. CF313]
gi|398081762|gb|EJL72533.1| peptide chain release factor 2 [Variovorax sp. CF313]
Length = 300
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 6 RHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RH S AS +F ++D S +I+ D++ R SG GGQ + KT++ V LTHIPT
Sbjct: 148 RHTSFAS-IFVYPEIDDSIEIEINPSDVRTDTFRASGAGGQHINKTDSAVRLTHIPT 203
>gi|404497824|ref|YP_006721930.1| peptidyl-tRNA hydrolase-like protein [Geobacter metallireducens
GS-15]
gi|418067860|ref|ZP_12705190.1| Class I peptide chain release factor [Geobacter metallireducens
RCH3]
gi|78195424|gb|ABB33191.1| peptidyl-tRNA hydrolase-related protein [Geobacter
metallireducens GS-15]
gi|373558039|gb|EHP84404.1| Class I peptide chain release factor [Geobacter metallireducens
RCH3]
Length = 121
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 23/35 (65%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+ E D++E FVR SG GGQ V KT CV + H PT
Sbjct: 25 VAEADLEESFVRSSGAGGQHVNKTATCVQIKHRPT 59
>gi|377563641|ref|ZP_09792980.1| peptide chain release factor 2 [Gordonia sputi NBRC 100414]
gi|377529088|dbj|GAB38145.1| peptide chain release factor 2 [Gordonia sputi NBRC 100414]
Length = 371
Score = 43.9 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 19/35 (54%), Positives = 25/35 (71%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+DE D++ R SGPGGQ+V T++ V LTHIPT
Sbjct: 235 VDENDVKVDVYRSSGPGGQSVNTTDSAVRLTHIPT 269
>gi|329896805|ref|ZP_08271721.1| peptide chain release factor 2 [gamma proteobacterium IMCC3088]
gi|328921560|gb|EGG28940.1| peptide chain release factor 2 [gamma proteobacterium IMCC3088]
Length = 321
Score = 43.9 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 25/58 (43%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S AS +F ++D + +I+ D++ R SG GGQ V KT++ V LTH+PT
Sbjct: 167 RRHTSFAS-VFVSPEIDDNIEIEINPADLRVDTYRASGAGGQHVNKTDSAVRLTHLPT 223
>gi|441523265|ref|ZP_21004893.1| peptide chain release factor 2 [Gordonia sihwensis NBRC 108236]
gi|441457115|dbj|GAC62854.1| peptide chain release factor 2 [Gordonia sihwensis NBRC 108236]
Length = 370
Score = 43.9 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 19/35 (54%), Positives = 25/35 (71%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
IDE D++ R SGPGGQ+V T++ V LTH+PT
Sbjct: 235 IDENDVRVDVYRSSGPGGQSVNTTDSAVRLTHVPT 269
>gi|68535523|ref|YP_250228.1| peptide chain release factor 2 [Corynebacterium jeikeium K411]
gi|260579727|ref|ZP_05847586.1| peptide chain release factor 2 [Corynebacterium jeikeium ATCC
43734]
gi|68263122|emb|CAI36610.1| peptide chain release factor RF-2 [Corynebacterium jeikeium K411]
gi|258602157|gb|EEW15475.1| peptide chain release factor 2 [Corynebacterium jeikeium ATCC
43734]
Length = 377
Score = 43.9 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 19/35 (54%), Positives = 25/35 (71%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
IDE D++ R SGPGGQ+V T++ V LTH+PT
Sbjct: 238 IDENDVRVDVYRSSGPGGQSVNTTDSAVRLTHVPT 272
>gi|386392849|ref|ZP_10077630.1| peptide chain release factor 2 [Desulfovibrio sp. U5L]
gi|385733727|gb|EIG53925.1| peptide chain release factor 2 [Desulfovibrio sp. U5L]
Length = 366
Score = 43.9 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 24/60 (40%), Positives = 36/60 (60%), Gaps = 3/60 (5%)
Query: 5 RRHLSLAS-SLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTD 63
RRH S AS ++ LD + E+D++ R SGPGGQ V KT++ + +TH+PT+
Sbjct: 211 RRHTSFASVDVYPDAGLDIDI--DVKEEDLRVDVFRASGPGGQHVNKTSSAIRITHLPTN 268
>gi|441507575|ref|ZP_20989501.1| peptide chain release factor 2 [Gordonia aichiensis NBRC 108223]
gi|441448651|dbj|GAC47462.1| peptide chain release factor 2 [Gordonia aichiensis NBRC 108223]
Length = 371
Score = 43.9 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 19/35 (54%), Positives = 25/35 (71%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+DE D++ R SGPGGQ+V T++ V LTHIPT
Sbjct: 235 VDENDVKVDVYRSSGPGGQSVNTTDSAVRLTHIPT 269
>gi|326383344|ref|ZP_08205032.1| peptide chain release factor 2 [Gordonia neofelifaecis NRRL
B-59395]
gi|326198094|gb|EGD55280.1| peptide chain release factor 2 [Gordonia neofelifaecis NRRL
B-59395]
Length = 370
Score = 43.9 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 19/35 (54%), Positives = 25/35 (71%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
IDE D++ R SGPGGQ+V T++ V LTH+PT
Sbjct: 235 IDENDVRVDVYRSSGPGGQSVNTTDSAVRLTHVPT 269
>gi|452851241|ref|YP_007492925.1| Peptide chain release factor 2 (fragment) [Desulfovibrio
piezophilus]
gi|451894895|emb|CCH47774.1| Peptide chain release factor 2 (fragment) [Desulfovibrio
piezophilus]
Length = 303
Score = 43.9 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S AS D+D ++ ++D++ R SGPGGQ+V KT++ V +TH+PT
Sbjct: 144 RRHTSFASVDVYP-DMDDDIEIEVKDEDLRIDTFRSSGPGGQSVNKTSSAVRITHLPT 200
>gi|299529204|ref|ZP_07042649.1| peptide chain release factor 2 [Comamonas testosteroni S44]
gi|418531227|ref|ZP_13097144.1| peptide chain release factor 2 [Comamonas testosteroni ATCC 11996]
gi|298722827|gb|EFI63739.1| peptide chain release factor 2 [Comamonas testosteroni S44]
gi|371451729|gb|EHN64764.1| peptide chain release factor 2 [Comamonas testosteroni ATCC 11996]
Length = 248
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 6 RHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RH S SSLF ++D S I+ D++ R SG GGQ + KT++ V LTHIPT
Sbjct: 96 RHTSF-SSLFVYPEIDDSIEININPSDVRTDTYRASGAGGQHINKTDSAVRLTHIPT 151
>gi|171058449|ref|YP_001790798.1| peptide chain release factor 2 [Leptothrix cholodnii SP-6]
gi|170775894|gb|ACB34033.1| peptide chain release factor 2 [Leptothrix cholodnii SP-6]
Length = 300
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 6 RHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RH S AS LF ++D S I+ D++ R SG GGQ + KT++ V LTHIPT
Sbjct: 148 RHTSFAS-LFVYPEVDDSIEIDINPADVRTDTFRASGAGGQHINKTDSAVRLTHIPT 203
>gi|377562090|ref|ZP_09791505.1| peptide chain release factor 2 [Gordonia otitidis NBRC 100426]
gi|377520760|dbj|GAB36670.1| peptide chain release factor 2 [Gordonia otitidis NBRC 100426]
Length = 371
Score = 43.9 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 19/35 (54%), Positives = 25/35 (71%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+DE D++ R SGPGGQ+V T++ V LTHIPT
Sbjct: 235 VDENDVKVDVYRSSGPGGQSVNTTDSAVRLTHIPT 269
>gi|365133245|ref|ZP_09342629.1| peptide chain release factor 2 [Subdoligranulum sp. 4_3_54A2FAA]
gi|363616055|gb|EHL67509.1| peptide chain release factor 2 [Subdoligranulum sp. 4_3_54A2FAA]
Length = 370
Score = 43.9 bits (102), Expect = 0.014, Method: Composition-based stats.
Identities = 26/58 (44%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S AS L +LD + +I +DI+ R SG GGQ + KT++ V L HIPT
Sbjct: 212 RRHTSFAS-LEVMPELDDAITVEIKPEDIKMEVFRSSGAGGQHINKTSSAVRLIHIPT 268
>gi|229491026|ref|ZP_04384859.1| peptide chain release factor 2 [Rhodococcus erythropolis SK121]
gi|453069985|ref|ZP_21973238.1| peptide chain release factor 2 [Rhodococcus qingshengii BKS 20-40]
gi|259585230|sp|C0ZXD0.1|RF2_RHOE4 RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|226184911|dbj|BAH33015.1| peptide chain release factor 2 [Rhodococcus erythropolis PR4]
gi|229322142|gb|EEN87930.1| peptide chain release factor 2 [Rhodococcus erythropolis SK121]
gi|452762530|gb|EME20826.1| peptide chain release factor 2 [Rhodococcus qingshengii BKS 20-40]
Length = 368
Score = 43.9 bits (102), Expect = 0.014, Method: Composition-based stats.
Identities = 20/36 (55%), Positives = 26/36 (72%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+I+E DI+ R SGPGGQ+V T++ V LTHIPT
Sbjct: 230 EINENDIRVDVYRSSGPGGQSVNTTDSAVRLTHIPT 265
>gi|57241933|ref|ZP_00369873.1| peptide chain release factor 2 [Campylobacter upsaliensis RM3195]
gi|57017125|gb|EAL53906.1| peptide chain release factor 2 [Campylobacter upsaliensis RM3195]
Length = 368
Score = 43.9 bits (102), Expect = 0.014, Method: Composition-based stats.
Identities = 28/59 (47%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTD 63
RRH S SS+ +LD +I+EKD++ F R SG GGQ V KT + V +THIPT+
Sbjct: 211 RRHTSF-SSVMVSPELDDDIEIEIEEKDLRIDFYRASGAGGQHVNKTESAVRITHIPTN 268
>gi|383757704|ref|YP_005436689.1| peptide chain release factor RF-2 PrfB [Rubrivivax gelatinosus
IL144]
gi|381378373|dbj|BAL95190.1| peptide chain release factor RF-2 PrfB [Rubrivivax gelatinosus
IL144]
Length = 351
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 6 RHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RH S AS LF ++D S I+ D++ R SG GGQ + KT++ V LTHIPT
Sbjct: 199 RHTSFAS-LFVYPEVDDSIEIDINPADVRTDTFRASGAGGQHINKTDSAVRLTHIPT 254
>gi|420156842|ref|ZP_14663682.1| peptide chain release factor 2 [Clostridium sp. MSTE9]
gi|394756852|gb|EJF39911.1| peptide chain release factor 2 [Clostridium sp. MSTE9]
Length = 375
Score = 43.9 bits (102), Expect = 0.014, Method: Composition-based stats.
Identities = 26/58 (44%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S AS L ++D +I DI+ + R SG GGQ V KT++ V LTH PT
Sbjct: 212 RRHTSFAS-LEVMPEIDSDTSVEISPDDIEMQVYRASGAGGQKVNKTSSAVRLTHKPT 268
>gi|344924433|ref|ZP_08777894.1| protein chain release factor B [Candidatus Odyssella
thessalonicensis L13]
Length = 367
Score = 43.9 bits (102), Expect = 0.014, Method: Composition-based stats.
Identities = 24/59 (40%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTD 63
RRH S AS ++ ++D S ++EKD++ R SG GGQ V KT + + +TH+PT+
Sbjct: 210 RRHTSFAS-VWVYPEIDDSIDIVVEEKDLRIDTYRASGAGGQHVNKTESAIRITHLPTN 267
>gi|347820566|ref|ZP_08874000.1| peptide chain release factor 2 [Verminephrobacter aporrectodeae
subsp. tuberculatae At4]
Length = 248
Score = 43.5 bits (101), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 6 RHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RH S AS LF ++D S I+ D++ R SG GGQ + KT++ V LTHIPT
Sbjct: 96 RHTSFAS-LFVYPEIDDSIQIDINPADVRTDTFRASGAGGQHINKTDSAVRLTHIPT 151
>gi|262203335|ref|YP_003274543.1| peptide chain release factor 2 [Gordonia bronchialis DSM 43247]
gi|262086682|gb|ACY22650.1| peptide chain release factor 2 [Gordonia bronchialis DSM 43247]
Length = 371
Score = 43.5 bits (101), Expect = 0.014, Method: Composition-based stats.
Identities = 19/35 (54%), Positives = 25/35 (71%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
IDE D++ R SGPGGQ+V T++ V LTH+PT
Sbjct: 235 IDENDVKVDVYRSSGPGGQSVNTTDSAVRLTHLPT 269
>gi|374287369|ref|YP_005034454.1| peptide chain release factor 2 [Bacteriovorax marinus SJ]
gi|301165910|emb|CBW25483.1| peptide chain release factor 2 [Bacteriovorax marinus SJ]
Length = 358
Score = 43.5 bits (101), Expect = 0.014, Method: Composition-based stats.
Identities = 24/60 (40%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTDS 64
RRH S SS+F ++D + +I +KD++ R G GGQ+V T++ V +THIPT++
Sbjct: 195 RRHTSF-SSIFVSPEIDDNIEIEILDKDLKIDVYRSGGAGGQSVNTTDSAVRITHIPTNT 253
>gi|239816762|ref|YP_002945672.1| hypothetical protein Vapar_3791 [Variovorax paradoxus S110]
gi|259585247|sp|C5CUX0.1|RF2_VARPS RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|239803339|gb|ACS20406.1| conserved hypothetical protein [Variovorax paradoxus S110]
Length = 367
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 6 RHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RH S AS +F ++D S +I+ D++ R SG GGQ + KT++ V LTHIPT
Sbjct: 215 RHTSFAS-IFVYPEIDDSIEIEINPADVRTDTFRASGAGGQHINKTDSAVRLTHIPT 270
>gi|288956982|ref|YP_003447323.1| peptide chain release factor RF-1 [Azospirillum sp. B510]
gi|288909290|dbj|BAI70779.1| peptide chain release factor RF-1 [Azospirillum sp. B510]
Length = 361
Score = 43.5 bits (101), Expect = 0.015, Method: Composition-based stats.
Identities = 19/35 (54%), Positives = 26/35 (74%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
IDEKD++ R SGPGGQ+V T++ V +TH+PT
Sbjct: 220 IDEKDLRIDVFRSSGPGGQSVNTTDSAVRITHLPT 254
>gi|399545708|ref|YP_006559016.1| peptide chain release factor 2 [Marinobacter sp. BSs20148]
gi|399161040|gb|AFP31603.1| Peptide chain release factor 2 [Marinobacter sp. BSs20148]
Length = 351
Score = 43.5 bits (101), Expect = 0.015, Method: Composition-based stats.
Identities = 26/58 (44%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S SS+F ++D S V +I+ D++ R SG GGQ V +T + V LTH PT
Sbjct: 198 RRHTSF-SSVFVAPEVDDSIVIEINPADLRVDVYRASGAGGQHVNRTESAVRLTHNPT 254
>gi|344925034|ref|ZP_08778495.1| peptide chain release factor h [Candidatus Odyssella
thessalonicensis L13]
Length = 209
Score = 43.5 bits (101), Expect = 0.015, Method: Composition-based stats.
Identities = 19/36 (52%), Positives = 25/36 (69%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
K+ EKD + VR SGPGGQ V KT + + +TH+PT
Sbjct: 107 KLVEKDCDIKAVRASGPGGQHVNKTESAIQITHLPT 142
>gi|417071544|ref|ZP_11950184.1| peptide chain release factor 1, partial [Lactobacillus rhamnosus
MTCC 5462]
gi|328463686|gb|EGF35274.1| peptide chain release factor 1 [Lactobacillus rhamnosus MTCC
5462]
Length = 198
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 21/36 (58%), Positives = 25/36 (69%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
KID KDI+ R SG GGQ V KT++ V +THIPT
Sbjct: 56 KIDPKDIRTDVYRSSGAGGQHVNKTSSAVRMTHIPT 91
>gi|325266606|ref|ZP_08133283.1| peptide chain release factor RF2 [Kingella denitrificans ATCC
33394]
gi|324982049|gb|EGC17684.1| peptide chain release factor RF2 [Kingella denitrificans ATCC
33394]
Length = 367
Score = 43.5 bits (101), Expect = 0.015, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+RH S AS +F ++D S +I+ D++ R SG GGQ + KT++ V +THIPT
Sbjct: 214 KRHTSFAS-VFVYPEVDDSFEVEINPADVRTDTYRASGAGGQHINKTDSAVRMTHIPT 270
>gi|297568438|ref|YP_003689782.1| hypothetical protein DaAHT2_0457 [Desulfurivibrio alkaliphilus
AHT2]
gi|296924353|gb|ADH85163.1| conserved hypothetical protein [Desulfurivibrio alkaliphilus AHT2]
Length = 368
Score = 43.5 bits (101), Expect = 0.015, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 38/58 (65%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S AS +F +LD + +I++KD++ R SG GGQ V KT++ + +TH+P+
Sbjct: 214 RRHTSFAS-VFIFPELDDNIEVEINDKDLRIDTYRASGAGGQHVNKTSSAIRITHLPS 270
>gi|58584615|ref|YP_198188.1| peptide chain release factor 1 [Wolbachia endosymbiont strain TRS
of Brugia malayi]
gi|75497913|sp|Q5GSS8.1|RF1_WOLTR RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|58418931|gb|AAW70946.1| Protein chain release factor A [Wolbachia endosymbiont strain TRS
of Brugia malayi]
Length = 359
Score = 43.5 bits (101), Expect = 0.015, Method: Composition-based stats.
Identities = 19/37 (51%), Positives = 28/37 (75%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTD 63
KI+EKD++ R SGPGGQ+V T++ V +TH+PT+
Sbjct: 217 KIEEKDLRIDVYRSSGPGGQSVNTTDSAVRVTHLPTE 253
>gi|315638344|ref|ZP_07893523.1| peptide chain release factor RF2 [Campylobacter upsaliensis JV21]
gi|315481555|gb|EFU72180.1| peptide chain release factor RF2 [Campylobacter upsaliensis JV21]
Length = 370
Score = 43.5 bits (101), Expect = 0.015, Method: Composition-based stats.
Identities = 28/59 (47%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTD 63
RRH S SS+ +LD +I+EKD++ F R SG GGQ V KT + V +THIPT+
Sbjct: 211 RRHTSF-SSVMVSPELDDDIEIEIEEKDLRIDFYRASGAGGQHVNKTESAVRITHIPTN 268
>gi|330813117|ref|YP_004357356.1| peptide chain release factor 1 [Candidatus Pelagibacter sp.
IMCC9063]
gi|327486212|gb|AEA80617.1| peptide chain release factor 1 [Candidatus Pelagibacter sp.
IMCC9063]
Length = 357
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 25/36 (69%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
KIDE D++ R GPGGQ+V T++ V +THIPT
Sbjct: 215 KIDENDLRIDVFRSGGPGGQSVNTTDSAVRITHIPT 250
>gi|407791982|ref|ZP_11139057.1| peptide chain release factor 2 [Gallaecimonas xiamenensis 3-C-1]
gi|407198458|gb|EKE68492.1| peptide chain release factor 2 [Gallaecimonas xiamenensis 3-C-1]
Length = 293
Score = 43.5 bits (101), Expect = 0.015, Method: Composition-based stats.
Identities = 24/60 (40%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTDS 64
RRH S AS +F ++D S +I+ D++ R SG GGQ V +T + V +TH+PT++
Sbjct: 140 RRHTSFAS-VFLSPEVDDSVNIEINPADLRIDVYRASGAGGQHVNRTESAVRITHMPTNT 198
>gi|402820806|ref|ZP_10870370.1| hypothetical protein IMCC14465_16040 [alpha proteobacterium
IMCC14465]
gi|402510452|gb|EJW20717.1| hypothetical protein IMCC14465_16040 [alpha proteobacterium
IMCC14465]
Length = 355
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 27/36 (75%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+I+EKD++ R SGPGGQ+V T++ V +TH+PT
Sbjct: 212 QIEEKDLRVDVFRASGPGGQSVNTTDSAVRITHLPT 247
>gi|169607138|ref|XP_001796989.1| hypothetical protein SNOG_06624 [Phaeosphaeria nodorum SN15]
gi|160707160|gb|EAT86455.2| hypothetical protein SNOG_06624 [Phaeosphaeria nodorum SN15]
Length = 294
Score = 43.5 bits (101), Expect = 0.015, Method: Composition-based stats.
Identities = 20/37 (54%), Positives = 27/37 (72%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTDS 64
ID+K+I+ +R SG GGQ V KT + V LTHIPT++
Sbjct: 143 IDQKEIKLEVMRASGAGGQHVNKTESAVRLTHIPTNT 179
>gi|408409663|ref|ZP_11180947.1| Peptide chain release factor 2 [Lactobacillus sp. 66c]
gi|407876173|emb|CCK82753.1| Peptide chain release factor 2 [Lactobacillus sp. 66c]
Length = 332
Score = 43.5 bits (101), Expect = 0.016, Method: Composition-based stats.
Identities = 26/58 (44%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S AS ++D S +ID KD++ R SG GGQ + KT++ V +THIPT
Sbjct: 172 RRHTSFASVEVIP-EVDDSINIEIDPKDLRIDVYRSSGAGGQHINKTSSAVRITHIPT 228
>gi|70934187|ref|XP_738357.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56514509|emb|CAH83815.1| conserved hypothetical protein [Plasmodium chabaudi chabaudi]
Length = 194
Score = 43.5 bits (101), Expect = 0.016, Method: Composition-based stats.
Identities = 24/56 (42%), Positives = 36/56 (64%), Gaps = 2/56 (3%)
Query: 10 LASSLFRKYDLDYSKVPKID--EKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTD 63
L +SL K D+ K+ I K+I+E F++G+G GGQ V KTNNCV++ + T+
Sbjct: 53 LKNSLNDKLDIINKKLQDIGICPKNIEETFIKGTGKGGQKVNKTNNCVMIKYDRTN 108
>gi|345872419|ref|ZP_08824354.1| peptide chain release factor 2 [Thiorhodococcus drewsii AZ1]
gi|343918967|gb|EGV29724.1| peptide chain release factor 2 [Thiorhodococcus drewsii AZ1]
Length = 365
Score = 43.5 bits (101), Expect = 0.016, Method: Composition-based stats.
Identities = 25/58 (43%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S AS LF ++D S +I+ D++ R SG GGQ V +T + V +TH+PT
Sbjct: 212 RRHTSFAS-LFVSPEVDDSVEIEINPADLRIDVYRASGAGGQHVNRTESAVRITHMPT 268
>gi|340052569|emb|CCC46850.1| putative peptide chain release factor 1, fragment [Trypanosoma
vivax Y486]
Length = 334
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 23/35 (65%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
I E D FVRGSGPGGQ + ++N V LTH P+
Sbjct: 181 IHESDCAIEFVRGSGPGGQGMQSSSNAVCLTHKPS 215
>gi|21242619|ref|NP_642201.1| peptide chain release factor 2 [Xanthomonas axonopodis pv. citri
str. 306]
gi|21108083|gb|AAM36737.1| peptide chain release factor 2 [Xanthomonas axonopodis pv. citri
str. 306]
Length = 329
Score = 43.5 bits (101), Expect = 0.016, Method: Composition-based stats.
Identities = 24/60 (40%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTDS 64
RRH S +S+F ++D + I+ D++ R SG GGQ V KT + V +THIPT++
Sbjct: 167 RRHTSF-TSVFVSPEVDDNIEIDINPADLRTDVYRSSGAGGQHVNKTESAVRITHIPTNT 225
>gi|357417571|ref|YP_004930591.1| peptide chain release factor 2 [Pseudoxanthomonas spadix BD-a59]
gi|355335149|gb|AER56550.1| peptide chain release factor 2 [Pseudoxanthomonas spadix BD-a59]
Length = 286
Score = 43.5 bits (101), Expect = 0.016, Method: Composition-based stats.
Identities = 24/60 (40%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTDS 64
RRH S +S+F ++D + I+ D++ R SG GGQ V KT + V +THIPT++
Sbjct: 124 RRHTSF-TSVFVSPEIDDNIQIDINPADLRTDVYRSSGAGGQHVNKTESAVRITHIPTNT 182
>gi|320528516|ref|ZP_08029673.1| peptide chain release factor 2 [Solobacterium moorei F0204]
gi|320131102|gb|EFW23675.1| peptide chain release factor 2 [Solobacterium moorei F0204]
Length = 350
Score = 43.5 bits (101), Expect = 0.016, Method: Composition-based stats.
Identities = 24/59 (40%), Positives = 37/59 (62%), Gaps = 3/59 (5%)
Query: 5 RRHLSLAS-SLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S AS + +++ D +ID+KD+ +R SG GGQ + KT++ V +THIP+
Sbjct: 192 RRHTSFASVEIMPEFEDDLEI--EIDDKDLDIITMRASGAGGQHINKTDSAVRMTHIPS 248
>gi|442322136|ref|YP_007362157.1| peptide chain release factor 2 [Myxococcus stipitatus DSM 14675]
gi|441489778|gb|AGC46473.1| peptide chain release factor 2 [Myxococcus stipitatus DSM 14675]
Length = 373
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 24/35 (68%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
I EKDI +F+RG G GGQ V KT++ L H+PT
Sbjct: 232 IPEKDIDLKFIRGGGAGGQKVNKTSSTAQLRHLPT 266
>gi|392378185|ref|YP_004985344.1| peptide chain release factor 1 [Azospirillum brasilense Sp245]
gi|356879666|emb|CCD00592.1| peptide chain release factor 1 [Azospirillum brasilense Sp245]
Length = 357
Score = 43.5 bits (101), Expect = 0.016, Method: Composition-based stats.
Identities = 19/35 (54%), Positives = 26/35 (74%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
IDEKD++ R SGPGGQ+V T++ V +TH+PT
Sbjct: 216 IDEKDLRIDVFRSSGPGGQSVNTTDSAVRITHLPT 250
>gi|304392719|ref|ZP_07374659.1| class I peptide chain release factor [Ahrensia sp. R2A130]
gi|303295349|gb|EFL89709.1| class I peptide chain release factor [Ahrensia sp. R2A130]
Length = 159
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 24/37 (64%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTDS 64
I E DI+ERFV+ GPGGQAV K + V L P D+
Sbjct: 30 ISESDIEERFVQAGGPGGQAVNKLSTAVQLRFNPRDA 66
>gi|39995653|ref|NP_951604.1| peptidyl-tRNA hydrolase-like protein [Geobacter sulfurreducens
PCA]
gi|409911111|ref|YP_006889576.1| peptidyl-tRNA hydrolase-like protein [Geobacter sulfurreducens
KN400]
gi|39982416|gb|AAR33877.1| peptidyl-tRNA hydrolase-related protein [Geobacter sulfurreducens
PCA]
gi|298504676|gb|ADI83399.1| peptidyl-tRNA hydrolase-related protein [Geobacter sulfurreducens
KN400]
Length = 126
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 23/35 (65%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+ E D++E FVR SG GGQ V KT CV + H PT
Sbjct: 25 VSEADLEETFVRSSGAGGQHVNKTATCVQIRHRPT 59
>gi|325925182|ref|ZP_08186595.1| bacterial peptide chain release factor 2 (bRF-2) [Xanthomonas
perforans 91-118]
gi|346724799|ref|YP_004851468.1| peptide chain release factor 2 [Xanthomonas axonopodis pv.
citrumelo F1]
gi|325544436|gb|EGD15806.1| bacterial peptide chain release factor 2 (bRF-2) [Xanthomonas
perforans 91-118]
gi|346649546|gb|AEO42170.1| peptide chain release factor 2 [Xanthomonas axonopodis pv.
citrumelo F1]
Length = 329
Score = 43.5 bits (101), Expect = 0.016, Method: Composition-based stats.
Identities = 24/60 (40%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTDS 64
RRH S +S+F ++D + I+ D++ R SG GGQ V KT + V +THIPT++
Sbjct: 167 RRHTSF-TSVFVSPEVDDNIEIDINPADLRTDVYRSSGAGGQHVNKTESAVRITHIPTNT 225
>gi|225025532|ref|ZP_03714724.1| hypothetical protein EIKCOROL_02432 [Eikenella corrodens ATCC
23834]
gi|224941678|gb|EEG22887.1| hypothetical protein EIKCOROL_02432 [Eikenella corrodens ATCC
23834]
Length = 367
Score = 43.5 bits (101), Expect = 0.016, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+RH S AS +F ++D S +I+ D++ R SG GGQ + KT++ V +THIPT
Sbjct: 214 KRHTSFAS-VFVYPEVDDSFEVEINPADVRTDTFRASGAGGQHINKTDSAVRMTHIPT 270
>gi|150865855|ref|XP_001385239.2| hypothetical protein PICST_60261 [Scheffersomyces stipitis CBS
6054]
gi|149387111|gb|ABN67210.2| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 156
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 28/36 (77%), Gaps = 1/36 (2%)
Query: 28 IDEKDIQERFVRGS-GPGGQAVAKTNNCVVLTHIPT 62
I E+++ E+F++G GPGGQ + K+N+ V LTH+PT
Sbjct: 17 IKEEELDEKFLKGGRGPGGQKINKSNSKVQLTHLPT 52
>gi|160898706|ref|YP_001564288.1| peptide chain release factor 2 [Delftia acidovorans SPH-1]
gi|160364290|gb|ABX35903.1| peptide chain release factor 2 [Delftia acidovorans SPH-1]
Length = 386
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 6 RHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RH S AS LF ++D S +I+ D++ R SG GGQ + KT++ V LTH+PT
Sbjct: 234 RHTSFAS-LFVYPEIDDSIQIEINPSDVRTDTYRASGAGGQHINKTDSAVRLTHMPT 289
>gi|453366616|dbj|GAC77990.1| peptide chain release factor 2 [Gordonia malaquae NBRC 108250]
Length = 370
Score = 43.5 bits (101), Expect = 0.017, Method: Composition-based stats.
Identities = 19/35 (54%), Positives = 25/35 (71%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
IDE D++ R SGPGGQ+V T++ V LTH+PT
Sbjct: 235 IDENDLRVDVYRSSGPGGQSVNTTDSAVRLTHVPT 269
>gi|21231300|ref|NP_637217.1| peptide chain release factor 2 [Xanthomonas campestris pv.
campestris str. ATCC 33913]
gi|66768648|ref|YP_243410.1| peptide chain release factor 2 [Xanthomonas campestris pv.
campestris str. 8004]
gi|188991534|ref|YP_001903544.1| peptide chain release factor 2 [Xanthomonas campestris pv.
campestris str. B100]
gi|21112954|gb|AAM41141.1| putative peptide release factor 2 [Xanthomonas campestris pv.
campestris str. ATCC 33913]
gi|66573980|gb|AAY49390.1| putative peptide release factor 2 [Xanthomonas campestris pv.
campestris str. 8004]
gi|167733294|emb|CAP51493.1| peptide chain release factor 2 [Xanthomonas campestris pv.
campestris]
Length = 313
Score = 43.5 bits (101), Expect = 0.017, Method: Composition-based stats.
Identities = 24/60 (40%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTDS 64
RRH S +S+F ++D + I+ D++ R SG GGQ V KT + V +THIPT++
Sbjct: 151 RRHTSF-TSVFVSPEVDDNIEIDINPADLRTDVYRSSGAGGQHVNKTESAVRITHIPTNT 209
>gi|58582496|ref|YP_201512.1| peptide chain release factor 2 [Xanthomonas oryzae pv. oryzae KACC
10331]
gi|84624384|ref|YP_451756.1| peptide chain release factor 2 [Xanthomonas oryzae pv. oryzae MAFF
311018]
gi|188575993|ref|YP_001912922.1| peptide chain release factor 2 [Xanthomonas oryzae pv. oryzae
PXO99A]
gi|58427090|gb|AAW76127.1| peptide chain release factor 2 [Xanthomonas oryzae pv. oryzae KACC
10331]
gi|84368324|dbj|BAE69482.1| peptide chain release factor 2 [Xanthomonas oryzae pv. oryzae MAFF
311018]
gi|188520445|gb|ACD58390.1| peptide chain release factor 2 [Xanthomonas oryzae pv. oryzae
PXO99A]
Length = 329
Score = 43.5 bits (101), Expect = 0.017, Method: Composition-based stats.
Identities = 24/60 (40%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTDS 64
RRH S +S+F ++D + I+ D++ R SG GGQ V KT + V +THIPT++
Sbjct: 167 RRHTSF-TSVFVSPEVDDNIEIDINPADLRTDVYRSSGAGGQHVNKTESAVRITHIPTNT 225
>gi|418517897|ref|ZP_13084053.1| peptide chain release factor 2 [Xanthomonas axonopodis pv.
malvacearum str. GSPB1386]
gi|410705368|gb|EKQ63842.1| peptide chain release factor 2 [Xanthomonas axonopodis pv.
malvacearum str. GSPB1386]
Length = 329
Score = 43.5 bits (101), Expect = 0.017, Method: Composition-based stats.
Identities = 24/60 (40%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTDS 64
RRH S +S+F ++D + I+ D++ R SG GGQ V KT + V +THIPT++
Sbjct: 167 RRHTSF-TSVFVSPEVDDNIEIDINPADLRTDVYRSSGAGGQHVNKTESAVRITHIPTNT 225
>gi|418522793|ref|ZP_13088824.1| peptide chain release factor 2 [Xanthomonas axonopodis pv.
malvacearum str. GSPB2388]
gi|410700783|gb|EKQ59325.1| peptide chain release factor 2 [Xanthomonas axonopodis pv.
malvacearum str. GSPB2388]
Length = 329
Score = 43.5 bits (101), Expect = 0.017, Method: Composition-based stats.
Identities = 24/60 (40%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTDS 64
RRH S +S+F ++D + I+ D++ R SG GGQ V KT + V +THIPT++
Sbjct: 167 RRHTSF-TSVFVSPEVDDNIEIDINPADLRTDVYRSSGAGGQHVNKTESAVRITHIPTNT 225
>gi|385143334|emb|CCH24373.1| peptide chain release factor 1 [Corynebacterium glutamicum K051]
Length = 358
Score = 43.5 bits (101), Expect = 0.017, Method: Composition-based stats.
Identities = 20/37 (54%), Positives = 26/37 (70%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTD 63
+IDEKDI+ R SG GGQ V T++ V +TH+PTD
Sbjct: 217 EIDEKDIRVDVYRSSGKGGQGVNTTDSAVRITHLPTD 253
>gi|381171598|ref|ZP_09880741.1| peptide chain release factor 2 [Xanthomonas citri pv.
mangiferaeindicae LMG 941]
gi|380687971|emb|CCG37228.1| peptide chain release factor 2 [Xanthomonas citri pv.
mangiferaeindicae LMG 941]
Length = 329
Score = 43.5 bits (101), Expect = 0.017, Method: Composition-based stats.
Identities = 24/60 (40%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTDS 64
RRH S +S+F ++D + I+ D++ R SG GGQ V KT + V +THIPT++
Sbjct: 167 RRHTSF-TSVFVSPEVDDNIEIDINPADLRTDVYRSSGAGGQHVNKTESAVRITHIPTNT 225
>gi|390992975|ref|ZP_10263181.1| peptide chain release factor 2 [Xanthomonas axonopodis pv. punicae
str. LMG 859]
gi|372552290|emb|CCF70156.1| peptide chain release factor 2 [Xanthomonas axonopodis pv. punicae
str. LMG 859]
Length = 329
Score = 43.5 bits (101), Expect = 0.017, Method: Composition-based stats.
Identities = 24/60 (40%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTDS 64
RRH S +S+F ++D + I+ D++ R SG GGQ V KT + V +THIPT++
Sbjct: 167 RRHTSF-TSVFVSPEVDDNIEIDINPADLRTDVYRSSGAGGQHVNKTESAVRITHIPTNT 225
>gi|325922147|ref|ZP_08183937.1| bacterial peptide chain release factor 2 (bRF-2) [Xanthomonas
gardneri ATCC 19865]
gi|325547382|gb|EGD18446.1| bacterial peptide chain release factor 2 (bRF-2) [Xanthomonas
gardneri ATCC 19865]
Length = 329
Score = 43.5 bits (101), Expect = 0.017, Method: Composition-based stats.
Identities = 24/60 (40%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTDS 64
RRH S +S+F ++D + I+ D++ R SG GGQ V KT + V +THIPT++
Sbjct: 167 RRHTSF-TSVFVSPEVDDNIEIDINPADLRTDVYRSSGAGGQHVNKTESAVRITHIPTNT 225
>gi|325916711|ref|ZP_08178968.1| bacterial peptide chain release factor 2 (bRF-2) [Xanthomonas
vesicatoria ATCC 35937]
gi|325537060|gb|EGD08799.1| bacterial peptide chain release factor 2 (bRF-2) [Xanthomonas
vesicatoria ATCC 35937]
Length = 329
Score = 43.5 bits (101), Expect = 0.017, Method: Composition-based stats.
Identities = 24/60 (40%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTDS 64
RRH S +S+F ++D + I+ D++ R SG GGQ V KT + V +THIPT++
Sbjct: 167 RRHTSF-TSVFVSPEVDDNIEIDINPADLRTDVYRSSGAGGQHVNKTESAVRITHIPTNT 225
>gi|260947746|ref|XP_002618170.1| hypothetical protein CLUG_01629 [Clavispora lusitaniae ATCC
42720]
gi|238848042|gb|EEQ37506.1| hypothetical protein CLUG_01629 [Clavispora lusitaniae ATCC
42720]
Length = 180
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Query: 9 SLASSLFRKYDLDYSKVPKIDEKDIQERFVRGS-GPGGQAVAKTNNCVVLTHIPT 62
SLA + +K L + I E++I E F++G GPGGQ + K+N+ V LTH PT
Sbjct: 30 SLALGIPKKNKLPPRPLWLIKEEEIDEEFLKGGRGPGGQKINKSNSKVQLTHKPT 84
>gi|398803760|ref|ZP_10562778.1| peptide chain release factor 2 [Polaromonas sp. CF318]
gi|398096013|gb|EJL86344.1| peptide chain release factor 2 [Polaromonas sp. CF318]
Length = 355
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 6 RHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RH S AS +F ++D S +I+ D++ R SG GGQ + KT++ V LTHIPT
Sbjct: 203 RHTSFAS-VFVYPEIDDSIEIEINPADVRTDTFRASGAGGQHINKTDSAVRLTHIPT 258
>gi|374293217|ref|YP_005040252.1| peptide chain release factor 1 [Azospirillum lipoferum 4B]
gi|357425156|emb|CBS88039.1| peptide chain release factor 1 [Azospirillum lipoferum 4B]
Length = 374
Score = 43.5 bits (101), Expect = 0.017, Method: Composition-based stats.
Identities = 19/35 (54%), Positives = 26/35 (74%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
IDEKD++ R SGPGGQ+V T++ V +TH+PT
Sbjct: 233 IDEKDLRIDVFRSSGPGGQSVNTTDSAVRITHLPT 267
>gi|302878965|ref|YP_003847529.1| hypothetical protein Galf_1754 [Gallionella capsiferriformans ES-2]
gi|302581754|gb|ADL55765.1| hypothetical protein Galf_1754 [Gallionella capsiferriformans ES-2]
Length = 367
Score = 43.5 bits (101), Expect = 0.017, Method: Composition-based stats.
Identities = 25/59 (42%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTD 63
RRH S SS+F ++D S +I+ D++ R SG GGQ + KT++ V +THIPT+
Sbjct: 214 RRHTSF-SSVFVYPEVDDSIEIEINPADLRVDTYRASGAGGQHINKTDSAVRITHIPTN 271
>gi|409350602|ref|ZP_11233660.1| Peptide chain release factor 2 [Lactobacillus equicursoris CIP
110162]
gi|407877313|emb|CCK85718.1| Peptide chain release factor 2 [Lactobacillus equicursoris CIP
110162]
Length = 332
Score = 43.5 bits (101), Expect = 0.017, Method: Composition-based stats.
Identities = 25/58 (43%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S AS D+ + +ID KD++ R SG GGQ + KT++ V +THIPT
Sbjct: 172 RRHTSFASVEVIPEVDDFINI-EIDPKDLRIDVYRSSGAGGQHINKTSSAVRITHIPT 228
>gi|167041273|gb|ABZ06029.1| putative peptidyl-tRNA hydrolase domain protein [uncultured marine
microorganism HF4000_005D21]
gi|167045778|gb|ABZ10424.1| putative peptidyl-tRNA hydrolase domain protein [uncultured marine
bacterium HF4000_APKG3108]
Length = 358
Score = 43.5 bits (101), Expect = 0.017, Method: Composition-based stats.
Identities = 19/36 (52%), Positives = 27/36 (75%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
KI+EKD++ R SGPGGQ+V T++ V +TH+PT
Sbjct: 215 KINEKDLRIDVFRSSGPGGQSVNTTDSAVRITHLPT 250
>gi|134097701|ref|YP_001103362.1| peptide chain release factor 2 [Saccharopolyspora erythraea NRRL
2338]
gi|291006339|ref|ZP_06564312.1| putative peptide chain release factor 2 [Saccharopolyspora
erythraea NRRL 2338]
gi|166225115|sp|A4F8R2.1|RF2_SACEN RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|133910324|emb|CAM00437.1| putative peptide chain release factor 2 [Saccharopolyspora
erythraea NRRL 2338]
Length = 367
Score = 43.5 bits (101), Expect = 0.017, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 30/44 (68%), Gaps = 3/44 (6%)
Query: 19 DLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+ D+ ++P EKDI+ R SGPGGQ+V T++ V +THIPT
Sbjct: 226 ETDHVEIP---EKDIRVDVFRSSGPGGQSVNTTDSAVRITHIPT 266
>gi|126667155|ref|ZP_01738129.1| peptide chain release factor 2 [Marinobacter sp. ELB17]
gi|126628311|gb|EAZ98934.1| peptide chain release factor 2 [Marinobacter sp. ELB17]
Length = 351
Score = 43.5 bits (101), Expect = 0.017, Method: Composition-based stats.
Identities = 26/58 (44%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S SS+F ++D S V +I+ D++ R SG GGQ V +T + V LTH PT
Sbjct: 198 RRHTSF-SSVFVAPEVDDSFVIEINPADLRVDVYRASGAGGQHVNRTESAVRLTHNPT 254
>gi|354613403|ref|ZP_09031324.1| Peptide chain release factor 2 [Saccharomonospora paurometabolica
YIM 90007]
gi|353222233|gb|EHB86550.1| Peptide chain release factor 2 [Saccharomonospora paurometabolica
YIM 90007]
Length = 368
Score = 43.5 bits (101), Expect = 0.018, Method: Composition-based stats.
Identities = 25/60 (41%), Positives = 36/60 (60%), Gaps = 5/60 (8%)
Query: 5 RRHLSLA--SSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RR S A L ++D+ ++P EKDI+ R SGPGGQ+V T++ V +TH+PT
Sbjct: 210 RRQTSFAHVEVLPEVAEVDHVEIP---EKDIRVDVYRSSGPGGQSVNTTDSAVRITHLPT 266
>gi|294624919|ref|ZP_06703574.1| peptide chain release factor 2 [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
gi|294666711|ref|ZP_06731947.1| peptide chain release factor 2 [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
gi|292600798|gb|EFF44880.1| peptide chain release factor 2 [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
gi|292603536|gb|EFF46951.1| peptide chain release factor 2 [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
Length = 313
Score = 43.5 bits (101), Expect = 0.018, Method: Composition-based stats.
Identities = 24/60 (40%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTDS 64
RRH S +S+F ++D + I+ D++ R SG GGQ V KT + V +THIPT++
Sbjct: 151 RRHTSF-TSVFVSPEVDDNIEIDINPADLRTDVYRSSGAGGQHVNKTESAVRITHIPTNT 209
>gi|297172687|gb|ADI23654.1| protein chain release factor B [uncultured Gemmatimonadales
bacterium HF4000_15H13]
Length = 328
Score = 43.5 bits (101), Expect = 0.018, Method: Composition-based stats.
Identities = 26/58 (44%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S AS +F +D S +I++ D++ R SG GGQ V KT++ V LTH PT
Sbjct: 172 RRHTSFAS-VFIYPQVDDSIEIEINDDDLRVDTYRASGAGGQHVNKTDSAVRLTHAPT 228
>gi|183221718|ref|YP_001839714.1| putative translation release factor [Leptospira biflexa serovar
Patoc strain 'Patoc 1 (Paris)']
gi|167780140|gb|ABZ98438.1| Putative translation release factor [Leptospira biflexa serovar
Patoc strain 'Patoc 1 (Paris)']
Length = 110
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 24/35 (68%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
I E D++E+FV+ SG GGQ V K VVL H+PT
Sbjct: 6 IRESDLKEQFVKASGKGGQNVNKVATAVVLLHLPT 40
>gi|329850508|ref|ZP_08265353.1| peptide chain release factor 2 [Asticcacaulis biprosthecum C19]
gi|328840823|gb|EGF90394.1| peptide chain release factor 2 [Asticcacaulis biprosthecum C19]
Length = 358
Score = 43.5 bits (101), Expect = 0.018, Method: Composition-based stats.
Identities = 25/58 (43%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S AS +D + V I+ D++ R SG GGQ + KT++ V LTHIPT
Sbjct: 195 RRHTSFASVWVYPV-VDDTIVIDINPADVRTDTYRASGAGGQHINKTDSAVRLTHIPT 251
>gi|328952688|ref|YP_004370022.1| hypothetical protein Desac_0974 [Desulfobacca acetoxidans DSM
11109]
gi|328453012|gb|AEB08841.1| hypothetical protein Desac_0974 [Desulfobacca acetoxidans DSM
11109]
Length = 369
Score = 43.5 bits (101), Expect = 0.018, Method: Composition-based stats.
Identities = 26/58 (44%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S A+ +F + D + EKD++ R SG GGQ V KT++ V LTHIPT
Sbjct: 213 RRHTSFAA-VFVYPEADEDIQIDLQEKDLRIDTFRASGAGGQHVNKTSSAVRLTHIPT 269
>gi|66805655|ref|XP_636549.1| class I peptide chain release factor [Dictyostelium discoideum AX4]
gi|60464924|gb|EAL63039.1| class I peptide chain release factor [Dictyostelium discoideum AX4]
Length = 424
Score = 43.5 bits (101), Expect = 0.018, Method: Composition-based stats.
Identities = 25/58 (43%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+RH S AS + D K+ ID KD+ +R SG GGQ V KT + V + HIPT
Sbjct: 268 KRHTSFASVVVYPISDDSIKI-NIDPKDLHFETLRSSGAGGQHVNKTESAVRIVHIPT 324
>gi|357632575|ref|ZP_09130453.1| Peptide chain release factor 2 [Desulfovibrio sp. FW1012B]
gi|357581129|gb|EHJ46462.1| Peptide chain release factor 2 [Desulfovibrio sp. FW1012B]
Length = 366
Score = 43.5 bits (101), Expect = 0.018, Method: Composition-based stats.
Identities = 24/59 (40%), Positives = 35/59 (59%), Gaps = 3/59 (5%)
Query: 5 RRHLSLAS-SLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S AS ++ LD + E+D++ R SGPGGQ V KT++ + +TH+PT
Sbjct: 211 RRHTSFASVDVYPDAGLDIDI--DVKEEDLRVDVFRASGPGGQHVNKTSSAIRITHLPT 267
>gi|256821963|ref|YP_003145926.1| peptide chain release factor 2 [Kangiella koreensis DSM 16069]
gi|256795502|gb|ACV26158.1| bacterial peptide chain release factor 2 (bRF- 2) [Kangiella
koreensis DSM 16069]
Length = 365
Score = 43.1 bits (100), Expect = 0.019, Method: Composition-based stats.
Identities = 25/58 (43%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S AS +F ++D S +++ D++ R SG GGQ V KT++ + LTHIPT
Sbjct: 212 RRHTSFAS-VFVYPEVDDSIDIEVNPADLRVDTYRASGAGGQHVNKTDSAIRLTHIPT 268
>gi|359420531|ref|ZP_09212466.1| peptide chain release factor 2 [Gordonia araii NBRC 100433]
gi|358243528|dbj|GAB10535.1| peptide chain release factor 2 [Gordonia araii NBRC 100433]
Length = 374
Score = 43.1 bits (100), Expect = 0.019, Method: Composition-based stats.
Identities = 19/35 (54%), Positives = 25/35 (71%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
IDE D++ R SGPGGQ+V T++ V LTH+PT
Sbjct: 235 IDENDLKVDVYRSSGPGGQSVNTTDSAVRLTHLPT 269
>gi|384427751|ref|YP_005637110.1| peptide chain release factor 2 [Xanthomonas campestris pv. raphani
756C]
gi|341936853|gb|AEL06992.1| peptide chain release factor 2 [Xanthomonas campestris pv. raphani
756C]
Length = 360
Score = 43.1 bits (100), Expect = 0.019, Method: Composition-based stats.
Identities = 24/60 (40%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTDS 64
RRH S +S+F ++D + I+ D++ R SG GGQ V KT + V +THIPT++
Sbjct: 198 RRHTSF-TSVFVSPEVDDNIEIDINPADLRTDVYRSSGAGGQHVNKTESAVRITHIPTNT 256
>gi|189911793|ref|YP_001963348.1| peptidyl-tRNA hydrolase [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Ames)']
gi|167776469|gb|ABZ94770.1| Peptidyl-tRNA hydrolase [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Ames)']
Length = 131
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 24/35 (68%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
I E D++E+FV+ SG GGQ V K VVL H+PT
Sbjct: 27 IRESDLKEQFVKASGKGGQNVNKVATAVVLLHLPT 61
>gi|406909367|gb|EKD49636.1| peptide chain release factor 1, partial [uncultured bacterium]
Length = 154
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 28/38 (73%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTDS 64
KID +DI+ R SGPGGQ+V T++ V +TH+PT++
Sbjct: 14 KIDPQDIRIDVFRSSGPGGQSVNTTDSAVRVTHLPTNT 51
>gi|405119283|gb|AFR94056.1| peptide chain release factor 1 [Cryptococcus neoformans var. grubii
H99]
Length = 471
Score = 43.1 bits (100), Expect = 0.019, Method: Composition-based stats.
Identities = 22/58 (37%), Positives = 32/58 (55%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
R H S + + D ++ P +D KD++ +R G GGQ V +T + V LTHIPT
Sbjct: 299 RIHTSTVAVIVLPMYPDTAEAPLVDPKDVRIDVMRARGAGGQHVNRTESAVRLTHIPT 356
>gi|193078655|gb|ABO13705.2| peptide chain release factor 2 [Acinetobacter baumannii ATCC 17978]
Length = 305
Score = 43.1 bits (100), Expect = 0.019, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S S++F ++D + I+ D++ R SG GGQ + KT++ V LTHIPT
Sbjct: 157 RRHTSF-SAVFISPEVDDNIEIDINPSDVRTDTYRASGAGGQHINKTDSAVRLTHIPT 213
>gi|167772028|ref|ZP_02444081.1| hypothetical protein ANACOL_03402 [Anaerotruncus colihominis DSM
17241]
gi|167665826|gb|EDS09956.1| peptide chain release factor 2 [Anaerotruncus colihominis DSM
17241]
Length = 374
Score = 43.1 bits (100), Expect = 0.019, Method: Composition-based stats.
Identities = 26/59 (44%), Positives = 36/59 (61%), Gaps = 3/59 (5%)
Query: 5 RRHLSLAS-SLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S AS + + D+S +I+ +DI+ R SG GGQ + KT++ V LTHIPT
Sbjct: 212 RRHTSFASVEVLPELPDDHSV--EINPEDIKMDVFRSSGAGGQHINKTSSAVRLTHIPT 268
>gi|433676518|ref|ZP_20508618.1| peptide chain release factor 2 [Xanthomonas translucens pv.
translucens DSM 18974]
gi|430818380|emb|CCP38921.1| peptide chain release factor 2 [Xanthomonas translucens pv.
translucens DSM 18974]
Length = 364
Score = 43.1 bits (100), Expect = 0.020, Method: Composition-based stats.
Identities = 24/59 (40%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTD 63
RRH S +S+F ++D + +I+ D++ R SG GGQ V KT + V +THIPT+
Sbjct: 202 RRHTSF-TSVFVSPEVDDNIDIEINPADLRTDVYRSSGAGGQHVNKTESAVRITHIPTN 259
>gi|227529549|ref|ZP_03959598.1| peptide chain release factor RF2 [Lactobacillus vaginalis ATCC
49540]
gi|227350508|gb|EEJ40799.1| peptide chain release factor RF2 [Lactobacillus vaginalis ATCC
49540]
Length = 356
Score = 43.1 bits (100), Expect = 0.020, Method: Composition-based stats.
Identities = 26/58 (44%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S AS +LD S ID D++ R SG GGQ + KT + V +THIPT
Sbjct: 196 RRHTSFASVDVMP-ELDESVNIDIDPSDLRVDTFRSSGAGGQHINKTESAVRITHIPT 252
>gi|58260798|ref|XP_567809.1| hypothetical protein CNK01240 [Cryptococcus neoformans var.
neoformans JEC21]
gi|134117261|ref|XP_772857.1| hypothetical protein CNBK2280 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50255475|gb|EAL18210.1| hypothetical protein CNBK2280 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57229890|gb|AAW46292.1| hypothetical protein CNK01240 [Cryptococcus neoformans var.
neoformans JEC21]
Length = 480
Score = 43.1 bits (100), Expect = 0.020, Method: Composition-based stats.
Identities = 22/58 (37%), Positives = 32/58 (55%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
R H S + + D ++ P +D KD++ +R G GGQ V +T + V LTHIPT
Sbjct: 308 RIHTSTVAVIVLPMYPDTAEAPLVDPKDVRIDVMRARGAGGQHVNRTESAVRLTHIPT 365
>gi|445461523|ref|ZP_21448782.1| peptide chain release factor 2 [Acinetobacter baumannii OIFC047]
gi|444771247|gb|ELW95378.1| peptide chain release factor 2 [Acinetobacter baumannii OIFC047]
Length = 328
Score = 43.1 bits (100), Expect = 0.021, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S S++F ++D + I+ D++ R SG GGQ + KT++ V LTHIPT
Sbjct: 175 RRHTSF-SAVFISPEVDDNIEIDINPSDVRTDTYRASGAGGQHINKTDSAVRLTHIPT 231
>gi|295689553|ref|YP_003593246.1| hypothetical protein Cseg_2164 [Caulobacter segnis ATCC 21756]
gi|295431456|gb|ADG10628.1| conserved hypothetical protein [Caulobacter segnis ATCC 21756]
Length = 373
Score = 43.1 bits (100), Expect = 0.021, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S AS+ D ++ +I+ D++ R SG GGQ + KT++ V LTHIPT
Sbjct: 210 RRHTSFASAWVYPVVDDTIEI-EINPADVRTDTYRASGAGGQHINKTDSAVRLTHIPT 266
>gi|383454655|ref|YP_005368644.1| peptide chain release factor 2 [Corallococcus coralloides DSM 2259]
gi|380733978|gb|AFE09980.1| peptide chain release factor 2 [Corallococcus coralloides DSM 2259]
Length = 319
Score = 43.1 bits (100), Expect = 0.021, Method: Composition-based stats.
Identities = 20/44 (45%), Positives = 29/44 (65%)
Query: 19 DLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
++D S + EKDI+ +F+RG G GGQ V KT++ L H+PT
Sbjct: 169 EVDDSIQIDLPEKDIELKFIRGGGAGGQKVNKTSSTAQLRHLPT 212
>gi|300775389|ref|ZP_07085251.1| probable peptide chain release factor H [Chryseobacterium gleum
ATCC 35910]
gi|300506129|gb|EFK37265.1| probable peptide chain release factor H [Chryseobacterium gleum
ATCC 35910]
Length = 232
Score = 43.1 bits (100), Expect = 0.021, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 34/62 (54%)
Query: 2 SIFRRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIP 61
S FR+ ++ ++L+ K+ +EKDI+ + R G GGQ V K N V THIP
Sbjct: 81 STFRKLHKRSNWFIGIFELENVKMIDFNEKDIRFQTARSQGSGGQNVNKVNTAVRATHIP 140
Query: 62 TD 63
T+
Sbjct: 141 TN 142
>gi|169634751|ref|YP_001708487.1| peptide chain release factor 2 [Acinetobacter baumannii SDF]
gi|169153543|emb|CAP02711.1| peptide chain release factor 2 [Acinetobacter baumannii]
Length = 310
Score = 43.1 bits (100), Expect = 0.021, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S S++F ++D + I+ D++ R SG GGQ + KT++ V LTHIPT
Sbjct: 157 RRHTSF-SAVFISPEVDDNIEIDINPSDVRTDTYRASGAGGQHINKTDSAVRLTHIPT 213
>gi|54288338|gb|AAV31626.1| predicted protein chain release factor A [uncultured alpha
proteobacterium EBAC2C11]
Length = 335
Score = 43.1 bits (100), Expect = 0.021, Method: Composition-based stats.
Identities = 18/36 (50%), Positives = 26/36 (72%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+IDE D++ R SGPGGQ+V T++ V +TH+PT
Sbjct: 216 RIDESDLRVDVFRASGPGGQSVNTTDSAVRITHLPT 251
>gi|418070392|ref|ZP_12707667.1| peptide chain release factor 1 [Lactobacillus rhamnosus R0011]
gi|357539812|gb|EHJ23829.1| peptide chain release factor 1 [Lactobacillus rhamnosus R0011]
Length = 359
Score = 43.1 bits (100), Expect = 0.021, Method: Composition-based stats.
Identities = 21/36 (58%), Positives = 25/36 (69%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
KID KDI+ R SG GGQ V KT++ V +THIPT
Sbjct: 217 KIDPKDIRTDVYRSSGAGGQHVNKTSSAVRMTHIPT 252
>gi|319795017|ref|YP_004156657.1| hypothetical protein Varpa_4378 [Variovorax paradoxus EPS]
gi|315597480|gb|ADU38546.1| hypothetical protein Varpa_4378 [Variovorax paradoxus EPS]
Length = 367
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 6 RHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RH S AS +F ++D S I+ D++ R SG GGQ + KT++ V LTHIPT
Sbjct: 215 RHTSFAS-IFVYPEIDDSIEIDINPSDVRTDTFRASGAGGQHINKTDSAVRLTHIPT 270
>gi|196230546|ref|ZP_03129408.1| Class I peptide chain release factor [Chthoniobacter flavus
Ellin428]
gi|196225476|gb|EDY19984.1| Class I peptide chain release factor [Chthoniobacter flavus
Ellin428]
Length = 132
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 25/36 (69%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
K++ D +E+F R SGPGGQ V K + V+L H+P+
Sbjct: 19 KLELADFEEKFSRSSGPGGQHVNKVSTAVMLRHVPS 54
>gi|348170778|ref|ZP_08877672.1| putative peptide chain release factor 2 [Saccharopolyspora spinosa
NRRL 18395]
Length = 368
Score = 43.1 bits (100), Expect = 0.021, Method: Composition-based stats.
Identities = 20/35 (57%), Positives = 25/35 (71%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
I EKDI+ R SGPGGQ+V T++ V +THIPT
Sbjct: 232 IPEKDIRVDVFRSSGPGGQSVNTTDSAVRITHIPT 266
>gi|424794119|ref|ZP_18220136.1| peptide chain release factor 2 [Xanthomonas translucens pv.
graminis ART-Xtg29]
gi|422796165|gb|EKU24724.1| peptide chain release factor 2 [Xanthomonas translucens pv.
graminis ART-Xtg29]
Length = 338
Score = 43.1 bits (100), Expect = 0.022, Method: Composition-based stats.
Identities = 24/59 (40%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTD 63
RRH S +S+F ++D + +I+ D++ R SG GGQ V KT + V +THIPT+
Sbjct: 176 RRHTSF-TSVFVSPEVDDNIDIEINPADLRTDVYRSSGAGGQHVNKTESAVRITHIPTN 233
>gi|321264047|ref|XP_003196741.1| peptide chain release factor 1, mitochondrial precursor
[Cryptococcus gattii WM276]
gi|317463218|gb|ADV24954.1| Peptide chain release factor 1, mitochondrial precursor, putative
[Cryptococcus gattii WM276]
Length = 476
Score = 43.1 bits (100), Expect = 0.022, Method: Composition-based stats.
Identities = 22/58 (37%), Positives = 32/58 (55%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
R H S + + D ++ P +D KD++ +R G GGQ V +T + V LTHIPT
Sbjct: 304 RIHTSTVAVIVLPMYPDTAEAPLVDPKDVRIDVMRARGAGGQHVNRTESAVRLTHIPT 361
>gi|441516620|ref|ZP_20998368.1| peptide chain release factor 2 [Gordonia hirsuta DSM 44140 = NBRC
16056]
gi|441456673|dbj|GAC56329.1| peptide chain release factor 2 [Gordonia hirsuta DSM 44140 = NBRC
16056]
Length = 372
Score = 43.1 bits (100), Expect = 0.022, Method: Composition-based stats.
Identities = 19/35 (54%), Positives = 25/35 (71%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
IDE +++ R SGPGGQ+V T++ V LTHIPT
Sbjct: 235 IDENEVKVDVYRSSGPGGQSVNTTDSAVRLTHIPT 269
>gi|405374674|ref|ZP_11029053.1| Peptide chain release factor 2 protein [Chondromyces apiculatus DSM
436]
gi|397086839|gb|EJJ17928.1| Peptide chain release factor 2 protein [Myxococcus sp. (contaminant
ex DSM 436)]
Length = 359
Score = 43.1 bits (100), Expect = 0.022, Method: Composition-based stats.
Identities = 20/44 (45%), Positives = 29/44 (65%)
Query: 19 DLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
++D S + EKDI+ +F+RG G GGQ V KT++ L H+PT
Sbjct: 209 EVDDSIQIDLPEKDIELKFIRGGGAGGQKVNKTSSTAQLRHLPT 252
>gi|375136401|ref|YP_004997051.1| peptide chain release factor 2 [Acinetobacter calcoaceticus PHEA-2]
gi|427426361|ref|ZP_18916419.1| peptide chain release factor 2 [Acinetobacter baumannii WC-136]
gi|325123846|gb|ADY83369.1| peptide chain release factor 2 [Acinetobacter calcoaceticus PHEA-2]
gi|425696822|gb|EKU66520.1| peptide chain release factor 2 [Acinetobacter baumannii WC-136]
Length = 310
Score = 43.1 bits (100), Expect = 0.022, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S S++F ++D + I+ D++ R SG GGQ + KT++ V LTHIPT
Sbjct: 157 RRHTSF-SAVFISPEVDDNIEIDINPSDVRTDTYRASGAGGQHINKTDSAVRLTHIPT 213
>gi|7688054|emb|CAB89696.1| putative peptide release factor 2 [Xanthomonas campestris pv.
campestris]
Length = 374
Score = 43.1 bits (100), Expect = 0.022, Method: Composition-based stats.
Identities = 24/60 (40%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTDS 64
RRH S +S+F ++D + I+ D++ R SG GGQ V KT + V +THIPT++
Sbjct: 212 RRHTSF-TSVFVSPEVDDNIEIDINPADLRTDVYRSSGAGGQHVNKTESAVRITHIPTNT 270
>gi|424743687|ref|ZP_18171994.1| peptide chain release factor 2 [Acinetobacter baumannii WC-141]
gi|422943202|gb|EKU38226.1| peptide chain release factor 2 [Acinetobacter baumannii WC-141]
Length = 310
Score = 43.1 bits (100), Expect = 0.022, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S S++F ++D + I+ D++ R SG GGQ + KT++ V LTHIPT
Sbjct: 157 RRHTSF-SAVFISPEVDDNIEIDINPSDVRTDTYRASGAGGQHINKTDSAVRLTHIPT 213
>gi|78047471|ref|YP_363646.1| peptide chain release factor 2 [Xanthomonas campestris pv.
vesicatoria str. 85-10]
gi|123585257|sp|Q3BUB7.1|RF2_XANC5 RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|78035901|emb|CAJ23592.1| peptide chain release factor 2 [Xanthomonas campestris pv.
vesicatoria str. 85-10]
Length = 374
Score = 43.1 bits (100), Expect = 0.022, Method: Composition-based stats.
Identities = 24/60 (40%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTDS 64
RRH S +S+F ++D + I+ D++ R SG GGQ V KT + V +THIPT++
Sbjct: 212 RRHTSF-TSVFVSPEVDDNIEIDINPADLRTDVYRSSGAGGQHVNKTESAVRITHIPTNT 270
>gi|384419206|ref|YP_005628566.1| peptide chain release factor 2, programmed frameshift [Xanthomonas
oryzae pv. oryzicola BLS256]
gi|353462119|gb|AEQ96398.1| peptide chain release factor 2, programmed frameshift [Xanthomonas
oryzae pv. oryzicola BLS256]
Length = 374
Score = 43.1 bits (100), Expect = 0.022, Method: Composition-based stats.
Identities = 24/60 (40%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTDS 64
RRH S +S+F ++D + I+ D++ R SG GGQ V KT + V +THIPT++
Sbjct: 212 RRHTSF-TSVFVSPEVDDNIEIDINPADLRTDVYRSSGAGGQHVNKTESAVRITHIPTNT 270
>gi|317153200|ref|YP_004121248.1| peptide chain release factor 2 [Desulfovibrio aespoeensis Aspo-2]
gi|316943451|gb|ADU62502.1| peptide chain release factor 2 [Desulfovibrio aespoeensis Aspo-2]
Length = 391
Score = 43.1 bits (100), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S AS D+D ++ ++D++ R SGPGGQ+V KT++ V +TH+PT
Sbjct: 231 RRHTSFASVDVYP-DMDDDIEIEVRDEDLRIDVFRSSGPGGQSVNKTSSAVRITHLPT 287
>gi|88608013|ref|YP_506293.1| peptide chain release factor 1 [Neorickettsia sennetsu str.
Miyayama]
gi|119361566|sp|Q2GE03.1|RF1_NEOSM RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|88600182|gb|ABD45650.1| peptide chain release factor 1 [Neorickettsia sennetsu str.
Miyayama]
Length = 367
Score = 43.1 bits (100), Expect = 0.022, Method: Composition-based stats.
Identities = 19/36 (52%), Positives = 27/36 (75%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
KI++KD++ R SGPGGQ+V T++ V +THIPT
Sbjct: 217 KINDKDLRIDVYRSSGPGGQSVNTTDSAVRITHIPT 252
>gi|389796765|ref|ZP_10199816.1| peptide chain release factor 2 [Rhodanobacter sp. 116-2]
gi|388448290|gb|EIM04275.1| peptide chain release factor 2 [Rhodanobacter sp. 116-2]
Length = 329
Score = 43.1 bits (100), Expect = 0.022, Method: Composition-based stats.
Identities = 24/60 (40%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTDS 64
RRH S +S+F ++D +I+ D++ R SG GGQ V KT + V +THIPT++
Sbjct: 167 RRHTSF-TSVFVSPEVDDDIDIEINPADLRTDVYRSSGAGGQHVNKTESAVRITHIPTNT 225
>gi|372489474|ref|YP_005029039.1| peptide chain release factor 2 [Dechlorosoma suillum PS]
gi|359356027|gb|AEV27198.1| peptide chain release factor 2 [Dechlorosoma suillum PS]
Length = 367
Score = 43.1 bits (100), Expect = 0.023, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S +S+F ++D S I+ D++ R SG GGQ + KT++ V LTH+PT
Sbjct: 214 RRHTSF-TSVFVYPEVDDSIEIDINPADVRTDTYRASGAGGQHINKTDSAVRLTHVPT 270
>gi|293610588|ref|ZP_06692888.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|292826932|gb|EFF85297.1| conserved hypothetical protein [Acinetobacter sp. SH024]
Length = 337
Score = 43.1 bits (100), Expect = 0.023, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S S++F ++D + I+ D++ R SG GGQ + KT++ V LTHIPT
Sbjct: 184 RRHTSF-SAVFISPEVDDNIEIDINPSDVRTDTYRASGAGGQHINKTDSAVRLTHIPT 240
>gi|169794367|ref|YP_001712160.1| peptide chain release factor 2 [Acinetobacter baumannii AYE]
gi|184159830|ref|YP_001848169.1| protein chain release factor B [Acinetobacter baumannii ACICU]
gi|213159055|ref|YP_002321053.1| peptide chain release factor 2 [Acinetobacter baumannii AB0057]
gi|215481924|ref|YP_002324106.1| peptide chain release factor 2 [Acinetobacter baumannii AB307-0294]
gi|239503845|ref|ZP_04663155.1| peptide chain release factor 2 [Acinetobacter baumannii AB900]
gi|260557921|ref|ZP_05830134.1| peptide chain release factor 2 [Acinetobacter baumannii ATCC 19606
= CIP 70.34]
gi|332854818|ref|ZP_08435581.1| peptide chain release factor 2 [Acinetobacter baumannii 6013150]
gi|332868948|ref|ZP_08438507.1| peptide chain release factor 2 [Acinetobacter baumannii 6013113]
gi|332872826|ref|ZP_08440791.1| peptide chain release factor 2 [Acinetobacter baumannii 6014059]
gi|384133522|ref|YP_005516134.1| Peptide chain release factor 2 [Acinetobacter baumannii 1656-2]
gi|384144951|ref|YP_005527661.1| peptide chain release factor 2 [Acinetobacter baumannii MDR-ZJ06]
gi|385239256|ref|YP_005800595.1| protein chain release factor B [Acinetobacter baumannii
TCDC-AB0715]
gi|387122251|ref|YP_006288133.1| peptide chain release factor 2 [Acinetobacter baumannii MDR-TJ]
gi|403673338|ref|ZP_10935639.1| peptide chain release factor 2 [Acinetobacter sp. NCTC 10304]
gi|407930737|ref|YP_006846380.1| peptide chain release factor 2 [Acinetobacter baumannii TYTH-1]
gi|416147598|ref|ZP_11601906.1| protein chain release factor B [Acinetobacter baumannii AB210]
gi|417546134|ref|ZP_12197220.1| peptide chain release factor 2 [Acinetobacter baumannii OIFC032]
gi|417555593|ref|ZP_12206662.1| peptide chain release factor 2 [Acinetobacter baumannii Naval-81]
gi|417562196|ref|ZP_12213075.1| peptide chain release factor 2 [Acinetobacter baumannii OIFC137]
gi|417565700|ref|ZP_12216574.1| peptide chain release factor 2 [Acinetobacter baumannii OIFC143]
gi|417571032|ref|ZP_12221889.1| peptide chain release factor 2 [Acinetobacter baumannii OIFC189]
gi|417575100|ref|ZP_12225953.1| peptide chain release factor 2 [Acinetobacter baumannii Canada
BC-5]
gi|417577540|ref|ZP_12228385.1| peptide chain release factor 2 [Acinetobacter baumannii Naval-17]
gi|417870802|ref|ZP_12515752.1| peptide chain release factor 2 [Acinetobacter baumannii ABNIH1]
gi|417875352|ref|ZP_12520170.1| peptide chain release factor 2 [Acinetobacter baumannii ABNIH2]
gi|417880345|ref|ZP_12524876.1| peptide chain release factor 2 [Acinetobacter baumannii ABNIH3]
gi|417883372|ref|ZP_12527619.1| peptide chain release factor 2 [Acinetobacter baumannii ABNIH4]
gi|421199654|ref|ZP_15656815.1| peptide chain release factor 2 [Acinetobacter baumannii OIFC109]
gi|421202950|ref|ZP_15660094.1| peptide chain release factor 2 [Acinetobacter baumannii AC12]
gi|421455580|ref|ZP_15904924.1| peptide chain release factor 2 [Acinetobacter baumannii IS-123]
gi|421533389|ref|ZP_15979674.1| peptide chain release factor 2 [Acinetobacter baumannii AC30]
gi|421620857|ref|ZP_16061785.1| peptide chain release factor 2 [Acinetobacter baumannii OIFC074]
gi|421624181|ref|ZP_16065054.1| peptide chain release factor 2 [Acinetobacter baumannii OIFC098]
gi|421627847|ref|ZP_16068644.1| peptide chain release factor 2 [Acinetobacter baumannii OIFC180]
gi|421635323|ref|ZP_16075926.1| peptide chain release factor 2 [Acinetobacter baumannii Naval-13]
gi|421641896|ref|ZP_16082427.1| peptide chain release factor 2 [Acinetobacter baumannii IS-235]
gi|421647811|ref|ZP_16088222.1| peptide chain release factor 2 [Acinetobacter baumannii IS-251]
gi|421650431|ref|ZP_16090808.1| peptide chain release factor 2 [Acinetobacter baumannii OIFC0162]
gi|421654733|ref|ZP_16095060.1| peptide chain release factor 2 [Acinetobacter baumannii Naval-72]
gi|421661054|ref|ZP_16101235.1| peptide chain release factor 2 [Acinetobacter baumannii Naval-83]
gi|421662907|ref|ZP_16103061.1| peptide chain release factor 2 [Acinetobacter baumannii OIFC110]
gi|421668323|ref|ZP_16108363.1| peptide chain release factor 2 [Acinetobacter baumannii OIFC087]
gi|421670137|ref|ZP_16110146.1| peptide chain release factor 2 [Acinetobacter baumannii OIFC099]
gi|421673544|ref|ZP_16113481.1| peptide chain release factor 2 [Acinetobacter baumannii OIFC065]
gi|421680027|ref|ZP_16119890.1| peptide chain release factor 2 [Acinetobacter baumannii OIFC111]
gi|421688727|ref|ZP_16128425.1| peptide chain release factor 2 [Acinetobacter baumannii IS-143]
gi|421690142|ref|ZP_16129813.1| peptide chain release factor 2 [Acinetobacter baumannii IS-116]
gi|421693578|ref|ZP_16133211.1| peptide chain release factor 2 [Acinetobacter baumannii WC-692]
gi|421698204|ref|ZP_16137746.1| peptide chain release factor 2 [Acinetobacter baumannii IS-58]
gi|421705095|ref|ZP_16144536.1| peptide chain release factor 2 [Acinetobacter baumannii ZWS1122]
gi|421708874|ref|ZP_16148247.1| peptide chain release factor 2 [Acinetobacter baumannii ZWS1219]
gi|421789880|ref|ZP_16226124.1| peptide chain release factor 2 [Acinetobacter baumannii Naval-82]
gi|421790676|ref|ZP_16226875.1| peptide chain release factor 2 [Acinetobacter baumannii Naval-2]
gi|421795108|ref|ZP_16231193.1| peptide chain release factor 2 [Acinetobacter baumannii Naval-21]
gi|421799333|ref|ZP_16235326.1| peptide chain release factor 2 [Acinetobacter baumannii Canada BC1]
gi|421803995|ref|ZP_16239907.1| peptide chain release factor 2 [Acinetobacter baumannii WC-A-694]
gi|421807395|ref|ZP_16243256.1| peptide chain release factor 2 [Acinetobacter baumannii OIFC035]
gi|424050619|ref|ZP_17788155.1| peptide chain release factor 2 [Acinetobacter baumannii Ab11111]
gi|424058316|ref|ZP_17795813.1| peptide chain release factor 2 [Acinetobacter baumannii Ab33333]
gi|424061791|ref|ZP_17799278.1| peptide chain release factor 2 [Acinetobacter baumannii Ab44444]
gi|425748146|ref|ZP_18866134.1| peptide chain release factor 2 [Acinetobacter baumannii WC-348]
gi|425754104|ref|ZP_18871971.1| peptide chain release factor 2 [Acinetobacter baumannii Naval-113]
gi|445410551|ref|ZP_21432867.1| peptide chain release factor 2 [Acinetobacter baumannii Naval-57]
gi|445450928|ref|ZP_21444622.1| peptide chain release factor 2 [Acinetobacter baumannii WC-A-92]
gi|445470724|ref|ZP_21451656.1| peptide chain release factor 2 [Acinetobacter baumannii OIFC338]
gi|445484703|ref|ZP_21456738.1| peptide chain release factor 2 [Acinetobacter baumannii Naval-78]
gi|445489834|ref|ZP_21458842.1| peptide chain release factor 2 [Acinetobacter baumannii AA-014]
gi|169147294|emb|CAM85155.1| peptide chain release factor 2 [Acinetobacter baumannii AYE]
gi|183211424|gb|ACC58822.1| Protein chain release factor B [Acinetobacter baumannii ACICU]
gi|213058215|gb|ACJ43117.1| peptide chain release factor 2 [Acinetobacter baumannii AB0057]
gi|213988530|gb|ACJ58829.1| peptide chain release factor 2 [Acinetobacter baumannii AB307-0294]
gi|260408712|gb|EEX02017.1| peptide chain release factor 2 [Acinetobacter baumannii ATCC 19606
= CIP 70.34]
gi|322509742|gb|ADX05196.1| Peptide chain release factor 2 [Acinetobacter baumannii 1656-2]
gi|323519757|gb|ADX94138.1| protein chain release factor B [Acinetobacter baumannii
TCDC-AB0715]
gi|332727820|gb|EGJ59224.1| peptide chain release factor 2 [Acinetobacter baumannii 6013150]
gi|332732991|gb|EGJ64193.1| peptide chain release factor 2 [Acinetobacter baumannii 6013113]
gi|332738987|gb|EGJ69849.1| peptide chain release factor 2 [Acinetobacter baumannii 6014059]
gi|333365506|gb|EGK47520.1| protein chain release factor B [Acinetobacter baumannii AB210]
gi|342225429|gb|EGT90427.1| peptide chain release factor 2 [Acinetobacter baumannii ABNIH3]
gi|342226136|gb|EGT91111.1| peptide chain release factor 2 [Acinetobacter baumannii ABNIH2]
gi|342226869|gb|EGT91822.1| peptide chain release factor 2 [Acinetobacter baumannii ABNIH1]
gi|342235921|gb|EGU00477.1| peptide chain release factor 2 [Acinetobacter baumannii ABNIH4]
gi|347595444|gb|AEP08165.1| peptide chain release factor 2 [Acinetobacter baumannii MDR-ZJ06]
gi|385876743|gb|AFI93838.1| peptide chain release factor 2 [Acinetobacter baumannii MDR-TJ]
gi|395524778|gb|EJG12867.1| peptide chain release factor 2 [Acinetobacter baumannii OIFC137]
gi|395551480|gb|EJG17489.1| peptide chain release factor 2 [Acinetobacter baumannii OIFC189]
gi|395557456|gb|EJG23457.1| peptide chain release factor 2 [Acinetobacter baumannii OIFC143]
gi|395564651|gb|EJG26302.1| peptide chain release factor 2 [Acinetobacter baumannii OIFC109]
gi|395570761|gb|EJG31423.1| peptide chain release factor 2 [Acinetobacter baumannii Naval-17]
gi|398327426|gb|EJN43560.1| peptide chain release factor 2 [Acinetobacter baumannii AC12]
gi|400205833|gb|EJO36813.1| peptide chain release factor 2 [Acinetobacter baumannii Canada
BC-5]
gi|400211818|gb|EJO42780.1| peptide chain release factor 2 [Acinetobacter baumannii IS-123]
gi|400384022|gb|EJP42700.1| peptide chain release factor 2 [Acinetobacter baumannii OIFC032]
gi|400392010|gb|EJP59057.1| peptide chain release factor 2 [Acinetobacter baumannii Naval-81]
gi|404560484|gb|EKA65727.1| peptide chain release factor 2 [Acinetobacter baumannii IS-143]
gi|404564414|gb|EKA69593.1| peptide chain release factor 2 [Acinetobacter baumannii IS-116]
gi|404570215|gb|EKA75292.1| peptide chain release factor 2 [Acinetobacter baumannii WC-692]
gi|404572504|gb|EKA77546.1| peptide chain release factor 2 [Acinetobacter baumannii IS-58]
gi|404665558|gb|EKB33520.1| peptide chain release factor 2 [Acinetobacter baumannii Ab33333]
gi|404669372|gb|EKB37265.1| peptide chain release factor 2 [Acinetobacter baumannii Ab11111]
gi|404675518|gb|EKB43217.1| peptide chain release factor 2 [Acinetobacter baumannii Ab44444]
gi|407189188|gb|EKE60416.1| peptide chain release factor 2 [Acinetobacter baumannii ZWS1122]
gi|407189602|gb|EKE60828.1| peptide chain release factor 2 [Acinetobacter baumannii ZWS1219]
gi|407899318|gb|AFU36149.1| peptide chain release factor 2 [Acinetobacter baumannii TYTH-1]
gi|408510504|gb|EKK12166.1| peptide chain release factor 2 [Acinetobacter baumannii Naval-72]
gi|408510949|gb|EKK12608.1| peptide chain release factor 2 [Acinetobacter baumannii OIFC0162]
gi|408514648|gb|EKK16254.1| peptide chain release factor 2 [Acinetobacter baumannii IS-235]
gi|408516005|gb|EKK17584.1| peptide chain release factor 2 [Acinetobacter baumannii IS-251]
gi|408699717|gb|EKL45192.1| peptide chain release factor 2 [Acinetobacter baumannii OIFC074]
gi|408701749|gb|EKL47171.1| peptide chain release factor 2 [Acinetobacter baumannii OIFC098]
gi|408702875|gb|EKL48283.1| peptide chain release factor 2 [Acinetobacter baumannii Naval-13]
gi|408703358|gb|EKL48756.1| peptide chain release factor 2 [Acinetobacter baumannii Naval-83]
gi|408709733|gb|EKL54974.1| peptide chain release factor 2 [Acinetobacter baumannii OIFC180]
gi|408713935|gb|EKL59090.1| peptide chain release factor 2 [Acinetobacter baumannii OIFC110]
gi|409988821|gb|EKO44989.1| peptide chain release factor 2 [Acinetobacter baumannii AC30]
gi|410380761|gb|EKP33341.1| peptide chain release factor 2 [Acinetobacter baumannii OIFC087]
gi|410385762|gb|EKP38246.1| peptide chain release factor 2 [Acinetobacter baumannii OIFC065]
gi|410386695|gb|EKP39163.1| peptide chain release factor 2 [Acinetobacter baumannii OIFC099]
gi|410390375|gb|EKP42768.1| peptide chain release factor 2 [Acinetobacter baumannii OIFC111]
gi|410397005|gb|EKP49259.1| peptide chain release factor 2 [Acinetobacter baumannii Naval-82]
gi|410402189|gb|EKP54313.1| peptide chain release factor 2 [Acinetobacter baumannii Naval-21]
gi|410405301|gb|EKP57342.1| peptide chain release factor 2 [Acinetobacter baumannii Naval-2]
gi|410409888|gb|EKP61810.1| peptide chain release factor 2 [Acinetobacter baumannii Canada BC1]
gi|410412461|gb|EKP64320.1| peptide chain release factor 2 [Acinetobacter baumannii WC-A-694]
gi|410417037|gb|EKP68808.1| peptide chain release factor 2 [Acinetobacter baumannii OIFC035]
gi|425491692|gb|EKU57972.1| peptide chain release factor 2 [Acinetobacter baumannii WC-348]
gi|425497497|gb|EKU63603.1| peptide chain release factor 2 [Acinetobacter baumannii Naval-113]
gi|444755677|gb|ELW80253.1| peptide chain release factor 2 [Acinetobacter baumannii WC-A-92]
gi|444766276|gb|ELW90551.1| peptide chain release factor 2 [Acinetobacter baumannii AA-014]
gi|444767702|gb|ELW91948.1| peptide chain release factor 2 [Acinetobacter baumannii Naval-78]
gi|444772678|gb|ELW96793.1| peptide chain release factor 2 [Acinetobacter baumannii OIFC338]
gi|444779724|gb|ELX03697.1| peptide chain release factor 2 [Acinetobacter baumannii Naval-57]
gi|452952896|gb|EME58320.1| peptide chain release factor 2 [Acinetobacter baumannii MSP4-16]
Length = 310
Score = 43.1 bits (100), Expect = 0.023, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S S++F ++D + I+ D++ R SG GGQ + KT++ V LTHIPT
Sbjct: 157 RRHTSF-SAVFISPEVDDNIEIDINPSDVRTDTYRASGAGGQHINKTDSAVRLTHIPT 213
>gi|188997267|ref|YP_001931518.1| peptide chain release factor 2 [Sulfurihydrogenibium sp. YO3AOP1]
gi|229576671|sp|B2V5M0.1|RF2_SULSY RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|188932334|gb|ACD66964.1| peptide chain release factor 2 [Sulfurihydrogenibium sp. YO3AOP1]
Length = 369
Score = 43.1 bits (100), Expect = 0.023, Method: Composition-based stats.
Identities = 28/59 (47%), Positives = 38/59 (64%), Gaps = 3/59 (5%)
Query: 5 RRHLSL-ASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S A S+ + D D KV +I+E+D++ R SG GGQ V KT++ V +THIPT
Sbjct: 211 RRHTSFSAVSVIPEIDEDI-KV-EINEEDLRIDTYRASGAGGQHVNKTDSAVRITHIPT 267
>gi|225630064|ref|YP_002726855.1| peptide chain release factor 1 [Wolbachia sp. wRi]
gi|225592045|gb|ACN95064.1| peptide chain release factor 1 [Wolbachia sp. wRi]
Length = 357
Score = 43.1 bits (100), Expect = 0.023, Method: Composition-based stats.
Identities = 19/36 (52%), Positives = 27/36 (75%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
KI+EKD++ R SGPGGQ+V T++ V +TH+PT
Sbjct: 215 KIEEKDLRIDVYRSSGPGGQSVNTTDSAVRVTHLPT 250
>gi|199597587|ref|ZP_03211016.1| Protein chain release factor A [Lactobacillus rhamnosus HN001]
gi|258508166|ref|YP_003170917.1| peptide chain release factor 1 [Lactobacillus rhamnosus GG]
gi|258539381|ref|YP_003173880.1| peptide chain release factor 1 [Lactobacillus rhamnosus Lc 705]
gi|385827838|ref|YP_005865610.1| peptide chain release factor [Lactobacillus rhamnosus GG]
gi|385835027|ref|YP_005872801.1| peptide chain release factor 1 [Lactobacillus rhamnosus ATCC 8530]
gi|199591610|gb|EDY99687.1| Protein chain release factor A [Lactobacillus rhamnosus HN001]
gi|257148093|emb|CAR87066.1| Peptide chain release factor 1 [Lactobacillus rhamnosus GG]
gi|257151057|emb|CAR90029.1| Peptide chain release factor 1 [Lactobacillus rhamnosus Lc 705]
gi|259649483|dbj|BAI41645.1| peptide chain release factor [Lactobacillus rhamnosus GG]
gi|355394518|gb|AER63948.1| peptide chain release factor 1 [Lactobacillus rhamnosus ATCC 8530]
Length = 359
Score = 43.1 bits (100), Expect = 0.023, Method: Composition-based stats.
Identities = 21/36 (58%), Positives = 25/36 (69%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
KID KDI+ R SG GGQ V KT++ V +THIPT
Sbjct: 217 KIDPKDIRTDVYRSSGAGGQHVNKTSSAVRMTHIPT 252
>gi|395491365|ref|ZP_10422944.1| peptide chain release factor 1 [Sphingomonas sp. PAMC 26617]
Length = 357
Score = 43.1 bits (100), Expect = 0.024, Method: Composition-based stats.
Identities = 19/36 (52%), Positives = 26/36 (72%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
KID+KD++ R SGPGGQ+V T++ V + HIPT
Sbjct: 215 KIDDKDLRIDVYRSSGPGGQSVNTTDSAVRIVHIPT 250
>gi|319935038|ref|ZP_08009481.1| peptide chain release factor 2 [Coprobacillus sp. 29_1]
gi|319810056|gb|EFW06425.1| peptide chain release factor 2 [Coprobacillus sp. 29_1]
Length = 371
Score = 43.1 bits (100), Expect = 0.024, Method: Composition-based stats.
Identities = 24/59 (40%), Positives = 36/59 (61%), Gaps = 3/59 (5%)
Query: 5 RRHLSLAS-SLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S AS + ++D D +ID+ D++ R SG GGQ + KT++ + +THIPT
Sbjct: 211 RRHTSFASVDVMPEFDNDIEI--EIDQNDLRIDTYRASGAGGQHINKTDSAIRITHIPT 267
>gi|404251678|ref|ZP_10955646.1| peptide chain release factor 1 [Sphingomonas sp. PAMC 26621]
Length = 357
Score = 43.1 bits (100), Expect = 0.024, Method: Composition-based stats.
Identities = 19/36 (52%), Positives = 26/36 (72%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
KID+KD++ R SGPGGQ+V T++ V + HIPT
Sbjct: 215 KIDDKDLRIDVYRSSGPGGQSVNTTDSAVRIVHIPT 250
>gi|329120730|ref|ZP_08249392.1| peptide chain release factor RF2 [Neisseria bacilliformis ATCC
BAA-1200]
gi|327460527|gb|EGF06863.1| peptide chain release factor RF2 [Neisseria bacilliformis ATCC
BAA-1200]
Length = 417
Score = 43.1 bits (100), Expect = 0.024, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+RH S AS +F ++D S +I+ D++ R SG GGQ + KT++ V +THIPT
Sbjct: 264 KRHTSFAS-VFVYPEVDDSFEIEINPADLRTDTYRASGAGGQHINKTDSAVRITHIPT 320
>gi|90413184|ref|ZP_01221180.1| putative peptide chain release factor 2 [Photobacterium profundum
3TCK]
gi|90325875|gb|EAS42327.1| putative peptide chain release factor 2 [Photobacterium profundum
3TCK]
Length = 353
Score = 43.1 bits (100), Expect = 0.024, Method: Composition-based stats.
Identities = 24/59 (40%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTD 63
RRH S AS+ F ++D + V I+ D++ R SG GGQ V T + V +TH+PT+
Sbjct: 200 RRHTSFASA-FVYPEIDDNIVIDINPSDLRIDVYRASGAGGQHVNTTESAVRITHVPTN 257
>gi|436841995|ref|YP_007326373.1| Peptide chain release factor 2 [Desulfovibrio hydrothermalis AM13 =
DSM 14728]
gi|432170901|emb|CCO24272.1| Peptide chain release factor 2 [Desulfovibrio hydrothermalis AM13 =
DSM 14728]
Length = 311
Score = 42.7 bits (99), Expect = 0.024, Method: Composition-based stats.
Identities = 25/60 (41%), Positives = 36/60 (60%), Gaps = 3/60 (5%)
Query: 5 RRHLSLAS-SLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTD 63
RRH S AS ++ + D +I ++DI+ R SGPGGQ V KTN+ V +TH+ T+
Sbjct: 151 RRHTSFASVDVYPEISQDIEI--EIKDEDIRLDVFRASGPGGQHVNKTNSAVRITHLATN 208
>gi|42520141|ref|NP_966056.1| peptide chain release factor 1 [Wolbachia endosymbiont of
Drosophila melanogaster]
gi|58698355|ref|ZP_00373269.1| peptide chain release factor 1 [Wolbachia endosymbiont of
Drosophila ananassae]
gi|81652805|sp|Q73IC2.1|RF1_WOLPM RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|42409878|gb|AAS13990.1| peptide chain release factor 1 [Wolbachia endosymbiont of
Drosophila melanogaster]
gi|58535109|gb|EAL59194.1| peptide chain release factor 1 [Wolbachia endosymbiont of
Drosophila ananassae]
Length = 359
Score = 42.7 bits (99), Expect = 0.024, Method: Composition-based stats.
Identities = 19/36 (52%), Positives = 27/36 (75%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
KI+EKD++ R SGPGGQ+V T++ V +TH+PT
Sbjct: 217 KIEEKDLRIDVYRSSGPGGQSVNTTDSAVRVTHLPT 252
>gi|402496738|ref|YP_006555998.1| peptide chain release factor 1 [Wolbachia endosymbiont of
Onchocerca ochengi]
gi|398650011|emb|CCF78181.1| peptide chain release factor 1 [Wolbachia endosymbiont of
Onchocerca ochengi]
Length = 373
Score = 42.7 bits (99), Expect = 0.024, Method: Composition-based stats.
Identities = 19/36 (52%), Positives = 27/36 (75%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
KI+EKD++ R SGPGGQ+V T++ V +TH+PT
Sbjct: 231 KIEEKDLRIDVYRSSGPGGQSVNTTDSAVRVTHLPT 266
>gi|289207525|ref|YP_003459591.1| peptide chain release factor 1 [Thioalkalivibrio sp. K90mix]
gi|288943156|gb|ADC70855.1| peptide chain release factor 1 [Thioalkalivibrio sp. K90mix]
Length = 361
Score = 42.7 bits (99), Expect = 0.024, Method: Composition-based stats.
Identities = 20/44 (45%), Positives = 29/44 (65%)
Query: 19 DLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+LD ++P I+ D++ R SG GGQ V KT++ V LTH+PT
Sbjct: 210 ELDEVEMPDINPADLRVDTFRASGAGGQHVNKTDSAVRLTHLPT 253
>gi|16126117|ref|NP_420681.1| peptide chain release factor 2 [Caulobacter crescentus CB15]
gi|221234887|ref|YP_002517323.1| peptide chain release factor 2 [Caulobacter crescentus NA1000]
gi|24638156|sp|Q9A752.1|RF2_CAUCR RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|254790910|sp|B8GWM3.1|RF2_CAUCN RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|13423319|gb|AAK23849.1| peptide chain release factor 2 [Caulobacter crescentus CB15]
gi|220964059|gb|ACL95415.1| bacterial peptide chain Release factor 2 (RF-2) [Caulobacter
crescentus NA1000]
Length = 371
Score = 42.7 bits (99), Expect = 0.024, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S AS+ D ++ +I+ D++ R SG GGQ + KT++ V LTHIPT
Sbjct: 207 RRHTSFASAWVYPVVDDNIEI-EINPSDVRTDTYRASGAGGQHINKTDSAVRLTHIPT 263
>gi|423080184|ref|ZP_17068815.1| peptide chain release factor 1, partial [Lactobacillus rhamnosus
ATCC 21052]
gi|357543845|gb|EHJ25858.1| peptide chain release factor 1, partial [Lactobacillus rhamnosus
ATCC 21052]
Length = 381
Score = 42.7 bits (99), Expect = 0.025, Method: Composition-based stats.
Identities = 21/36 (58%), Positives = 25/36 (69%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
KID KDI+ R SG GGQ V KT++ V +THIPT
Sbjct: 239 KIDPKDIRTDVYRSSGAGGQHVNKTSSAVRMTHIPT 274
>gi|335041017|ref|ZP_08534135.1| Peptide chain release factor 1 [Caldalkalibacillus thermarum
TA2.A1]
gi|334179167|gb|EGL81814.1| Peptide chain release factor 1 [Caldalkalibacillus thermarum
TA2.A1]
Length = 356
Score = 42.7 bits (99), Expect = 0.025, Method: Composition-based stats.
Identities = 21/36 (58%), Positives = 25/36 (69%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+IDEKDI+ SGPGGQ+V T + V LTHIPT
Sbjct: 214 EIDEKDIRVDVFCSSGPGGQSVNTTQSAVRLTHIPT 249
>gi|294084599|ref|YP_003551357.1| protein chain release factor B [Candidatus Puniceispirillum marinum
IMCC1322]
gi|292664172|gb|ADE39273.1| Protein chain release factor B [Candidatus Puniceispirillum marinum
IMCC1322]
Length = 369
Score = 42.7 bits (99), Expect = 0.025, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTD 63
RRH S AS+ D ++ ++++KD++ R SG GGQ V KT++ + +TH+PT+
Sbjct: 210 RRHTSFASAWVYPVVDDNIEI-EVEDKDLRIDTYRASGAGGQHVNKTDSAIRITHLPTN 267
>gi|229551967|ref|ZP_04440692.1| peptide chain release factor RF1 [Lactobacillus rhamnosus LMS2-1]
gi|229314702|gb|EEN80675.1| peptide chain release factor RF1 [Lactobacillus rhamnosus LMS2-1]
Length = 386
Score = 42.7 bits (99), Expect = 0.025, Method: Composition-based stats.
Identities = 21/36 (58%), Positives = 25/36 (69%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
KID KDI+ R SG GGQ V KT++ V +THIPT
Sbjct: 244 KIDPKDIRTDVYRSSGAGGQHVNKTSSAVRMTHIPT 279
>gi|162312297|ref|NP_596474.2| peptide release factor (predicted) [Schizosaccharomyces pombe
972h-]
gi|212288570|sp|Q9Y811.2|YONI_SCHPO RecName: Full=Uncharacterized peptide chain release factor-like
protein C1105.18c, mitochondrial; Flags: Precursor
gi|157310457|emb|CAB50981.2| peptide release factor (predicted) [Schizosaccharomyces pombe]
Length = 162
Score = 42.7 bits (99), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 27/39 (69%)
Query: 24 KVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
++ ++ E+DI+E F+ G GPGGQ + KT+ + HIPT
Sbjct: 43 QLERLQEEDIEETFICGKGPGGQKINKTSIVAQVKHIPT 81
>gi|451341196|ref|ZP_21911663.1| Peptide chain release factor 2 [Amycolatopsis azurea DSM 43854]
gi|449415922|gb|EMD21722.1| Peptide chain release factor 2 [Amycolatopsis azurea DSM 43854]
Length = 370
Score = 42.7 bits (99), Expect = 0.025, Method: Composition-based stats.
Identities = 20/35 (57%), Positives = 25/35 (71%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
I EKDI+ R SGPGGQ+V T++ V +THIPT
Sbjct: 235 IPEKDIRVDVYRSSGPGGQSVNTTDSAVRITHIPT 269
>gi|54307774|ref|YP_128794.1| peptide chain release factor 2 [Photobacterium profundum SS9]
gi|46912197|emb|CAG18992.1| putative peptide chain release factor 2 [Photobacterium profundum
SS9]
Length = 353
Score = 42.7 bits (99), Expect = 0.025, Method: Composition-based stats.
Identities = 24/59 (40%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTD 63
RRH S AS+ F ++D + V I+ D++ R SG GGQ V T + V +TH+PT+
Sbjct: 200 RRHTSFASA-FVYPEIDDNIVIDINPSDLRIDVYRASGAGGQHVNTTESAVRITHVPTN 257
>gi|406913515|gb|EKD52895.1| peptide chain release factor 1 [uncultured bacterium]
Length = 306
Score = 42.7 bits (99), Expect = 0.025, Method: Composition-based stats.
Identities = 18/36 (50%), Positives = 24/36 (66%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
++ E+D++ +F R GPGGQ V K N V LTH PT
Sbjct: 170 EVKEQDLEWQFTRAGGPGGQNVNKVNTAVRLTHKPT 205
>gi|148543602|ref|YP_001270972.1| peptide chain release factor 2 [Lactobacillus reuteri DSM 20016]
gi|184153010|ref|YP_001841351.1| peptide chain release factor 2 [Lactobacillus reuteri JCM 1112]
gi|227363435|ref|ZP_03847559.1| peptide chain release factor RF2 [Lactobacillus reuteri MM2-3]
gi|325681956|ref|ZP_08161474.1| peptide chain release factor RF2 [Lactobacillus reuteri MM4-1A]
gi|148530636|gb|ABQ82635.1| bacterial peptide chain release factor 2 (bRF-2) [Lactobacillus
reuteri DSM 20016]
gi|183224354|dbj|BAG24871.1| peptide chain release factor 2 [Lactobacillus reuteri JCM 1112]
gi|227071535|gb|EEI09834.1| peptide chain release factor RF2 [Lactobacillus reuteri MM2-3]
gi|324978600|gb|EGC15549.1| peptide chain release factor RF2 [Lactobacillus reuteri MM4-1A]
Length = 332
Score = 42.7 bits (99), Expect = 0.025, Method: Composition-based stats.
Identities = 26/58 (44%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S AS +LD S ID D++ R SG GGQ + KT + V +THIPT
Sbjct: 172 RRHTSFASVDVMP-ELDDSVEVDIDPSDLRVDTFRSSGAGGQHINKTESAVRITHIPT 228
>gi|408421449|ref|YP_006762863.1| peptide chain release factor 2 [Desulfobacula toluolica Tol2]
gi|405108662|emb|CCK82159.1| predicted peptide chain release factor 2, related to PrfB
[Desulfobacula toluolica Tol2]
Length = 266
Score = 42.7 bits (99), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+RH S AS D K+ IDE D++ R SG GGQ V KT++ V +TH+PT
Sbjct: 114 KRHTSFASVFVYPEIKDEIKID-IDESDLRIDVYRASGAGGQHVNKTSSAVRITHLPT 170
>gi|444320065|ref|XP_004180689.1| hypothetical protein TBLA_0E01100 [Tetrapisispora blattae CBS
6284]
gi|387513732|emb|CCH61170.1| hypothetical protein TBLA_0E01100 [Tetrapisispora blattae CBS
6284]
Length = 171
Score = 42.7 bits (99), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 37/69 (53%), Gaps = 14/69 (20%)
Query: 8 LSLASSLFRKYDLDYSKV----------PKI---DEKDIQERFVRGS-GPGGQAVAKTNN 53
+ + L R +++ KV PK+ DE DI+E F+ G GPGGQ + KTN+
Sbjct: 8 VRITKPLCRNFNIQNGKVLIKKNKFPPRPKLGADDENDIEETFLHGGRGPGGQKINKTNS 67
Query: 54 CVVLTHIPT 62
V L H+P+
Sbjct: 68 KVQLKHLPS 76
>gi|383649036|ref|ZP_09959442.1| peptide chain release factor 1 [Sphingomonas elodea ATCC 31461]
Length = 357
Score = 42.7 bits (99), Expect = 0.026, Method: Composition-based stats.
Identities = 18/36 (50%), Positives = 26/36 (72%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+ID+KD++ R SGPGGQ V T++ V +TH+PT
Sbjct: 215 QIDDKDLRIDIYRASGPGGQGVNTTDSAVRITHLPT 250
>gi|291439311|ref|ZP_06578701.1| peptide chain release factor 2 [Streptomyces ghanaensis ATCC 14672]
gi|291342206|gb|EFE69162.1| peptide chain release factor 2 [Streptomyces ghanaensis ATCC 14672]
Length = 368
Score = 42.7 bits (99), Expect = 0.026, Method: Composition-based stats.
Identities = 19/35 (54%), Positives = 24/35 (68%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
IDE D++ R SGPGGQ V T++ V +THIPT
Sbjct: 233 IDESDLRVDVYRSSGPGGQGVNTTDSAVRITHIPT 267
>gi|289663374|ref|ZP_06484955.1| peptide chain release factor 2, partial [Xanthomonas campestris pv.
vasculorum NCPPB 702]
gi|289668830|ref|ZP_06489905.1| peptide chain release factor 2, partial [Xanthomonas campestris pv.
musacearum NCPPB 4381]
Length = 276
Score = 42.7 bits (99), Expect = 0.026, Method: Composition-based stats.
Identities = 24/60 (40%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTDS 64
RRH S +S+F ++D + I+ D++ R SG GGQ V KT + V +THIPT++
Sbjct: 114 RRHTSF-TSVFVSPEVDDNIEIDINPADLRTDVYRSSGAGGQHVNKTESAVRITHIPTNT 172
>gi|421769637|ref|ZP_16206343.1| Peptide chain release factor 1 [Lactobacillus rhamnosus LRHMDP2]
gi|421771458|ref|ZP_16208118.1| Peptide chain release factor 1 [Lactobacillus rhamnosus LRHMDP3]
gi|411184142|gb|EKS51276.1| Peptide chain release factor 1 [Lactobacillus rhamnosus LRHMDP2]
gi|411186044|gb|EKS53170.1| Peptide chain release factor 1 [Lactobacillus rhamnosus LRHMDP3]
Length = 386
Score = 42.7 bits (99), Expect = 0.026, Method: Composition-based stats.
Identities = 21/36 (58%), Positives = 25/36 (69%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
KID KDI+ R SG GGQ V KT++ V +THIPT
Sbjct: 244 KIDPKDIRTDVYRSSGAGGQHVNKTSSAVRMTHIPT 279
>gi|342215025|ref|ZP_08707694.1| peptide chain release factor 2 [Veillonella sp. oral taxon 780 str.
F0422]
gi|341590131|gb|EGS33380.1| peptide chain release factor 2 [Veillonella sp. oral taxon 780 str.
F0422]
Length = 330
Score = 42.7 bits (99), Expect = 0.026, Method: Composition-based stats.
Identities = 24/61 (39%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Query: 2 SIFRRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIP 61
S RRH S + ++D + +D KD+Q R SG GGQ + KT++ V +THIP
Sbjct: 169 SAARRHTSFCAVDVMP-EIDETVEINLDMKDVQVDTYRASGAGGQHINKTDSAVRMTHIP 227
Query: 62 T 62
T
Sbjct: 228 T 228
>gi|401882221|gb|EJT46489.1| hypothetical protein A1Q1_04921 [Trichosporon asahii var. asahii
CBS 2479]
gi|406701426|gb|EKD04572.1| hypothetical protein A1Q2_01144 [Trichosporon asahii var. asahii
CBS 8904]
Length = 379
Score = 42.7 bits (99), Expect = 0.027, Method: Composition-based stats.
Identities = 21/58 (36%), Positives = 31/58 (53%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
R H S + + D + P +D KD++ +R G GGQ V KT + + LTH+PT
Sbjct: 207 RVHTSTITVIVNPIYPDKPEAPLVDPKDVRTDVMRAGGAGGQHVNKTESAIRLTHLPT 264
>gi|395242683|ref|ZP_10419679.1| Peptide chain release factor 2 [Lactobacillus pasteurii CRBIP
24.76]
gi|394479931|emb|CCI85919.1| Peptide chain release factor 2 [Lactobacillus pasteurii CRBIP
24.76]
Length = 332
Score = 42.7 bits (99), Expect = 0.027, Method: Composition-based stats.
Identities = 25/58 (43%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S AS ++D S +ID KD++ R SG GGQ + KT++ V +TH+PT
Sbjct: 172 RRHTSFASVEVIP-EVDDSIDIEIDPKDLRIDVFRSSGAGGQHINKTSSAVRITHLPT 228
>gi|393770687|ref|ZP_10359165.1| putative peptide chain release factor [Novosphingobium sp. Rr 2-17]
gi|392723794|gb|EIZ81181.1| putative peptide chain release factor [Novosphingobium sp. Rr 2-17]
Length = 173
Score = 42.7 bits (99), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 28/37 (75%)
Query: 26 PKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
P++ ++DI+ + +R SGPGGQ V KT++ V TH+PT
Sbjct: 71 PELRDEDIRYQTLRASGPGGQHVNKTDSAVRATHLPT 107
>gi|365960564|ref|YP_004942131.1| peptide chain release factor-like protein [Flavobacterium columnare
ATCC 49512]
gi|365737245|gb|AEW86338.1| peptide chain release factor-like protein [Flavobacterium columnare
ATCC 49512]
Length = 249
Score = 42.7 bits (99), Expect = 0.027, Method: Composition-based stats.
Identities = 21/61 (34%), Positives = 34/61 (55%)
Query: 2 SIFRRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIP 61
S FR+ + +++ + +P EKDIQ + +R SG GGQ V K ++ + TH+P
Sbjct: 100 STFRKFHKRKNWFIGIFEVPLTILPTFSEKDIQYQAMRSSGAGGQHVNKVSSAIRATHLP 159
Query: 62 T 62
T
Sbjct: 160 T 160
>gi|357590811|ref|ZP_09129477.1| peptide chain release factor 2 [Corynebacterium nuruki S6-4]
Length = 374
Score = 42.7 bits (99), Expect = 0.027, Method: Composition-based stats.
Identities = 19/35 (54%), Positives = 25/35 (71%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
IDE +++ R SGPGGQ+V T++ V LTHIPT
Sbjct: 235 IDENEVRVDVYRSSGPGGQSVNTTDSAVRLTHIPT 269
>gi|352081995|ref|ZP_08952818.1| peptide chain release factor 2 [Rhodanobacter sp. 2APBS1]
gi|351682133|gb|EHA65239.1| peptide chain release factor 2 [Rhodanobacter sp. 2APBS1]
Length = 367
Score = 42.7 bits (99), Expect = 0.027, Method: Composition-based stats.
Identities = 24/60 (40%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTDS 64
RRH S +S+F ++D +I+ D++ R SG GGQ V KT + V +THIPT++
Sbjct: 205 RRHTSF-TSVFVSPEVDDDIDIEINPADLRTDVYRSSGAGGQHVNKTESAVRITHIPTNT 263
>gi|258651861|ref|YP_003201017.1| peptide chain release factor 2 [Nakamurella multipartita DSM 44233]
gi|258555086|gb|ACV78028.1| peptide chain release factor 2 [Nakamurella multipartita DSM 44233]
Length = 369
Score = 42.7 bits (99), Expect = 0.027, Method: Composition-based stats.
Identities = 18/35 (51%), Positives = 25/35 (71%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+DEKD++ R SGPGGQ V T++ V +TH+PT
Sbjct: 230 VDEKDLRVDVYRSSGPGGQGVNTTDSAVRITHLPT 264
>gi|393722766|ref|ZP_10342693.1| peptide chain release factor 1 [Sphingomonas sp. PAMC 26605]
Length = 357
Score = 42.7 bits (99), Expect = 0.027, Method: Composition-based stats.
Identities = 19/36 (52%), Positives = 26/36 (72%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
KID+KD++ R SGPGGQ+V T++ V + HIPT
Sbjct: 215 KIDDKDLRIDVYRSSGPGGQSVNTTDSAVRIVHIPT 250
>gi|332531395|ref|ZP_08407299.1| hypothetical protein HGR_15544 [Hylemonella gracilis ATCC 19624]
gi|332039064|gb|EGI75486.1| hypothetical protein HGR_15544 [Hylemonella gracilis ATCC 19624]
Length = 248
Score = 42.7 bits (99), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 6 RHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RH S AS +F ++D + +I+ D++ R SG GGQ + KT++ V LTHIPT
Sbjct: 96 RHTSFAS-IFVYPEIDDTIEIEINPADVRTDTFRASGAGGQHINKTDSAVRLTHIPT 151
>gi|350563997|ref|ZP_08932816.1| peptide chain release factor 2 [Thioalkalimicrobium aerophilum AL3]
gi|349777997|gb|EGZ32356.1| peptide chain release factor 2 [Thioalkalimicrobium aerophilum AL3]
Length = 352
Score = 42.7 bits (99), Expect = 0.027, Method: Composition-based stats.
Identities = 24/60 (40%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTDS 64
RRH S AS +F ++D + I+ D++ R SG GGQ V KT + V +TH+PT++
Sbjct: 199 RRHTSFAS-VFISPEVDDNVEIDINPADLRIDVYRASGAGGQHVNKTESAVRITHLPTNT 257
>gi|297621679|ref|YP_003709816.1| peptide chain release factor 1 [Waddlia chondrophila WSU 86-1044]
gi|297376980|gb|ADI38810.1| putative peptide chain release factor 1 [Waddlia chondrophila WSU
86-1044]
gi|337292999|emb|CCB90997.1| putative peptide chain release factor 1 [Waddlia chondrophila
2032/99]
Length = 139
Score = 42.7 bits (99), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 24/35 (68%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
I +D+ E+F+ GSG GGQ V KT +CV L H P+
Sbjct: 20 IRNEDLTEKFILGSGKGGQKVNKTASCVYLKHEPS 54
>gi|386718400|ref|YP_006184726.1| peptide chain release factor 2 programmed frameshift-containing,
partial [Stenotrophomonas maltophilia D457]
gi|424668609|ref|ZP_18105634.1| peptide chain release factor 2 [Stenotrophomonas maltophilia
Ab55555]
gi|384077962|emb|CCH12551.1| Peptide chain release factor 2 programmed frameshift-containing
[Stenotrophomonas maltophilia D457]
gi|401068871|gb|EJP77395.1| peptide chain release factor 2 [Stenotrophomonas maltophilia
Ab55555]
gi|456735757|gb|EMF60483.1| Peptide chain release factor 2, programmed frameshift-containing
[Stenotrophomonas maltophilia EPM1]
Length = 308
Score = 42.7 bits (99), Expect = 0.027, Method: Composition-based stats.
Identities = 24/59 (40%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTD 63
RRH S +S+F ++D + I+ D++ R SG GGQ V KT + V +THIPT+
Sbjct: 146 RRHTSF-TSVFVSPEIDDNIDITINPADLRTDVYRSSGAGGQHVNKTESAVRITHIPTN 203
>gi|366086231|ref|ZP_09452716.1| peptide chain release factor 1 [Lactobacillus zeae KCTC 3804]
Length = 359
Score = 42.7 bits (99), Expect = 0.027, Method: Composition-based stats.
Identities = 21/36 (58%), Positives = 25/36 (69%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
KID KDI+ R SG GGQ V KT++ V +THIPT
Sbjct: 217 KIDPKDIRTDVYRSSGAGGQHVNKTSSAVRMTHIPT 252
>gi|71908457|ref|YP_286044.1| peptide chain release factor 2 [Dechloromonas aromatica RCB]
gi|71848078|gb|AAZ47574.1| bacterial peptide chain release factor 2 (bRF-2) [Dechloromonas
aromatica RCB]
Length = 325
Score = 42.7 bits (99), Expect = 0.028, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S +S+F ++D S I+ D++ R SG GGQ + KT++ V LTH+PT
Sbjct: 172 RRHTSF-TSVFVFPEVDDSIEININPADVRTDTYRASGAGGQHINKTDSAVRLTHVPT 228
>gi|254796771|ref|YP_003081607.1| peptide chain release factor 1 [Neorickettsia risticii str.
Illinois]
gi|254590013|gb|ACT69375.1| peptide chain release factor 1 [Neorickettsia risticii str.
Illinois]
Length = 367
Score = 42.7 bits (99), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 27/36 (75%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
KI++KD++ R SGPGGQ+V T++ V +THIPT
Sbjct: 217 KINDKDLRIDVYRSSGPGGQSVNTTDSAVRVTHIPT 252
>gi|108759158|ref|YP_632896.1| peptide chain release factor 2 [Myxococcus xanthus DK 1622]
gi|108463038|gb|ABF88223.1| peptide chain release factor 2 [Myxococcus xanthus DK 1622]
Length = 373
Score = 42.7 bits (99), Expect = 0.028, Method: Composition-based stats.
Identities = 19/35 (54%), Positives = 24/35 (68%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
I EKDI +F+RG G GGQ V KT++ L H+PT
Sbjct: 232 IPEKDIDLKFIRGGGAGGQKVNKTSSTAQLRHLPT 266
>gi|254521932|ref|ZP_05133987.1| peptide chain release factor 2 [Stenotrophomonas sp. SKA14]
gi|219719523|gb|EED38048.1| peptide chain release factor 2 [Stenotrophomonas sp. SKA14]
Length = 308
Score = 42.7 bits (99), Expect = 0.028, Method: Composition-based stats.
Identities = 24/59 (40%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTD 63
RRH S +S+F ++D + I+ D++ R SG GGQ V KT + V +THIPT+
Sbjct: 146 RRHTSF-TSVFVSPEIDDNIDITINPADLRTDVYRSSGAGGQHVNKTESAVRITHIPTN 203
>gi|423336076|ref|ZP_17313827.1| peptide chain release factor 2 [Lactobacillus reuteri ATCC 53608]
gi|337729279|emb|CCC04406.1| peptide chain release factor 2 [Lactobacillus reuteri ATCC 53608]
Length = 332
Score = 42.7 bits (99), Expect = 0.028, Method: Composition-based stats.
Identities = 26/58 (44%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S AS +LD S ID D++ R SG GGQ + KT + V +THIPT
Sbjct: 172 RRHTSFASVDVMP-ELDDSVEVDIDPSDLRVDTFRSSGAGGQHINKTESAVRITHIPT 228
>gi|227545120|ref|ZP_03975169.1| peptide chain release factor RF2 [Lactobacillus reuteri CF48-3A]
gi|338203931|ref|YP_004650076.1| peptide chain release factor RF2 [Lactobacillus reuteri SD2112]
gi|227184908|gb|EEI64979.1| peptide chain release factor RF2 [Lactobacillus reuteri CF48-3A]
gi|336449171|gb|AEI57786.1| peptide chain release factor RF2 [Lactobacillus reuteri SD2112]
Length = 332
Score = 42.7 bits (99), Expect = 0.028, Method: Composition-based stats.
Identities = 26/58 (44%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S AS +LD S ID D++ R SG GGQ + KT + V +THIPT
Sbjct: 172 RRHTSFASVDVMP-ELDDSVEVDIDPSDLRVDTFRSSGAGGQHINKTESAVRITHIPT 228
>gi|358458583|ref|ZP_09168791.1| Peptide chain release factor 2 [Frankia sp. CN3]
gi|357078106|gb|EHI87557.1| Peptide chain release factor 2 [Frankia sp. CN3]
Length = 367
Score = 42.7 bits (99), Expect = 0.029, Method: Composition-based stats.
Identities = 18/36 (50%), Positives = 26/36 (72%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTD 63
ID+KD++ R SGPGGQ V T++ V +TH+PT+
Sbjct: 228 IDDKDLRIDIFRSSGPGGQGVNTTDSAVRITHLPTN 263
>gi|260223373|emb|CBA33874.1| Peptide chain release factor 2 [Curvibacter putative symbiont of
Hydra magnipapillata]
Length = 342
Score = 42.7 bits (99), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 6 RHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RH S AS +F ++D S I+ D++ R SG GGQ + KT++ V LTHIPT
Sbjct: 190 RHTSFAS-VFVYPEIDDSIEIDINPADVRTDTFRASGAGGQHINKTDSAVRLTHIPT 245
>gi|111220808|ref|YP_711602.1| peptide chain release factor 2 [Frankia alni ACN14a]
gi|111148340|emb|CAJ60012.1| peptide chain release factor RF-2 [Frankia alni ACN14a]
Length = 369
Score = 42.7 bits (99), Expect = 0.029, Method: Composition-based stats.
Identities = 18/36 (50%), Positives = 26/36 (72%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTD 63
ID+KD++ R SGPGGQ V T++ V +TH+PT+
Sbjct: 231 IDDKDLRIDIFRSSGPGGQGVNTTDSAVRITHLPTN 266
>gi|418475196|ref|ZP_13044622.1| peptide chain release factor 2 [Streptomyces coelicoflavus ZG0656]
gi|371544193|gb|EHN72927.1| peptide chain release factor 2 [Streptomyces coelicoflavus ZG0656]
Length = 352
Score = 42.7 bits (99), Expect = 0.029, Method: Composition-based stats.
Identities = 19/36 (52%), Positives = 25/36 (69%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+IDE +++ R SGPGGQ V T++ V LTHIPT
Sbjct: 216 EIDESELRVDVYRSSGPGGQGVNTTDSAVRLTHIPT 251
>gi|345854356|ref|ZP_08807192.1| peptide chain release factor 2 [Streptomyces zinciresistens K42]
gi|345634189|gb|EGX55860.1| peptide chain release factor 2 [Streptomyces zinciresistens K42]
Length = 368
Score = 42.7 bits (99), Expect = 0.029, Method: Composition-based stats.
Identities = 19/36 (52%), Positives = 25/36 (69%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+IDE +++ R SGPGGQ V T++ V LTHIPT
Sbjct: 232 EIDESELRVDVYRSSGPGGQGVNTTDSAVRLTHIPT 267
>gi|408822688|ref|ZP_11207578.1| peptide chain release factor 2 [Pseudomonas geniculata N1]
Length = 308
Score = 42.7 bits (99), Expect = 0.030, Method: Composition-based stats.
Identities = 24/59 (40%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTD 63
RRH S +S+F ++D + I+ D++ R SG GGQ V KT + V +THIPT+
Sbjct: 146 RRHTSF-TSVFVSPEIDDNIDITINPADLRTDVYRSSGAGGQHVNKTESAVRITHIPTN 203
>gi|385678972|ref|ZP_10052900.1| peptide chain release factor RF-2 [Amycolatopsis sp. ATCC 39116]
Length = 367
Score = 42.7 bits (99), Expect = 0.030, Method: Composition-based stats.
Identities = 19/36 (52%), Positives = 26/36 (72%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+I EKDI+ R SGPGGQ+V T++ V +TH+PT
Sbjct: 231 EIPEKDIRVDVFRSSGPGGQSVNTTDSAVRITHLPT 266
>gi|359408232|ref|ZP_09200704.1| peptide chain release factor 2 [SAR116 cluster alpha
proteobacterium HIMB100]
gi|356676989|gb|EHI49338.1| peptide chain release factor 2 [SAR116 cluster alpha
proteobacterium HIMB100]
Length = 369
Score = 42.7 bits (99), Expect = 0.030, Method: Composition-based stats.
Identities = 23/59 (38%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTD 63
RRH S AS ++ ++D + +++EKD++ R SG GGQ V T++ + +THIPT+
Sbjct: 210 RRHTSFAS-VWIYPEVDDNIDIQLEEKDLRVDTYRASGAGGQHVNTTDSAIRITHIPTN 267
>gi|148255578|ref|YP_001240163.1| peptide chain release factor 2 [Bradyrhizobium sp. BTAi1]
gi|146407751|gb|ABQ36257.1| bacterial peptide chain release factor 2 (bRF-2) [Bradyrhizobium
sp. BTAi1]
Length = 323
Score = 42.7 bits (99), Expect = 0.030, Method: Composition-based stats.
Identities = 27/59 (45%), Positives = 35/59 (59%), Gaps = 3/59 (5%)
Query: 5 RRHLSLAS-SLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S +S ++F D D K+ I E D++ +R G GGQ V KT + V LTHIPT
Sbjct: 156 RRHTSFSSVAIFPVVD-DSIKI-DIKESDVRTDTMRSGGAGGQHVNKTESAVRLTHIPT 212
>gi|158317542|ref|YP_001510050.1| peptide chain release factor 2 [Frankia sp. EAN1pec]
gi|158112947|gb|ABW15144.1| peptide chain release factor 2 [Frankia sp. EAN1pec]
Length = 386
Score = 42.7 bits (99), Expect = 0.030, Method: Composition-based stats.
Identities = 18/36 (50%), Positives = 26/36 (72%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTD 63
IDEK+++ R SGPGGQ V T++ V +TH+PT+
Sbjct: 248 IDEKELRIDIFRSSGPGGQGVNTTDSAVRITHLPTN 283
>gi|429743488|ref|ZP_19277042.1| peptide chain release factor 2 [Neisseria sp. oral taxon 020 str.
F0370]
gi|429165271|gb|EKY07336.1| peptide chain release factor 2 [Neisseria sp. oral taxon 020 str.
F0370]
Length = 367
Score = 42.7 bits (99), Expect = 0.030, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+RH S AS +F ++D S +I+ D++ R SG GGQ + KT++ V +THIPT
Sbjct: 214 KRHTSFAS-VFVYPEVDDSFEVEINPADLRTDTYRASGAGGQHINKTDSAVRITHIPT 270
>gi|399028185|ref|ZP_10729488.1| putative peptide chain release factor H [Flavobacterium sp. CF136]
gi|398074262|gb|EJL65413.1| putative peptide chain release factor H [Flavobacterium sp. CF136]
Length = 213
Score = 42.7 bits (99), Expect = 0.030, Method: Composition-based stats.
Identities = 23/61 (37%), Positives = 34/61 (55%)
Query: 2 SIFRRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIP 61
S FR+ + ++++ S +I E DIQ + +R SG GGQ V K ++ V THIP
Sbjct: 81 SQFRKFHKRKNWFIGIFEIEKSTATEIFENDIQYQAMRSSGAGGQHVNKVSSAVRATHIP 140
Query: 62 T 62
T
Sbjct: 141 T 141
>gi|351732342|ref|ZP_08950033.1| hypothetical protein AradN_21307 [Acidovorax radicis N35]
Length = 248
Score = 42.7 bits (99), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 6 RHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RH S AS LF ++D S I+ D++ R SG GGQ + KT++ V LTH+PT
Sbjct: 96 RHTSFAS-LFVYPEIDDSIQIDINPADVRTDTYRASGAGGQHINKTDSAVRLTHMPT 151
>gi|410694058|ref|YP_003624680.1| Peptide chain release factor 2 (RF-2) [Thiomonas sp. 3As]
gi|294340483|emb|CAZ88864.1| Peptide chain release factor 2 (RF-2) [Thiomonas sp. 3As]
Length = 331
Score = 42.7 bits (99), Expect = 0.031, Method: Composition-based stats.
Identities = 25/57 (43%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 6 RHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RH S AS +F ++D S I+ D++ R SG GGQ + KT++ V LTHIPT
Sbjct: 179 RHTSFAS-VFVYPEVDDSIEIDINPADVRTDTFRASGAGGQHINKTDSAVRLTHIPT 234
>gi|85715460|ref|ZP_01046441.1| peptide chain release factor 2 [Nitrobacter sp. Nb-311A]
gi|85697655|gb|EAQ35531.1| peptide chain release factor 2 [Nitrobacter sp. Nb-311A]
Length = 322
Score = 42.7 bits (99), Expect = 0.031, Method: Composition-based stats.
Identities = 27/59 (45%), Positives = 35/59 (59%), Gaps = 3/59 (5%)
Query: 5 RRHLSLAS-SLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S +S ++F D D K+ I E D++ +R G GGQ V KT + V LTHIPT
Sbjct: 156 RRHTSFSSVAIFPVVD-DSIKI-DIKESDVRTDTMRSGGAGGQHVNKTESAVRLTHIPT 212
>gi|319760398|ref|YP_004124336.1| peptide chain release factor 2 [Candidatus Blochmannia vafer str.
BVAF]
gi|318039112|gb|ADV33662.1| peptide chain release factor 2 [Candidatus Blochmannia vafer str.
BVAF]
Length = 265
Score = 42.7 bits (99), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTD 63
RRH S AS +F +LD + I +D++ R SG GGQ V +T + V +THIPT+
Sbjct: 109 RRHTSFAS-IFVYPELDDNITINIRPEDLRVDVYRASGAGGQHVNRTESAVRVTHIPTN 166
>gi|383788715|ref|YP_005473284.1| peptide chain release factor 2 [Caldisericum exile AZM16c01]
gi|381364352|dbj|BAL81181.1| peptide chain release factor 2 [Caldisericum exile AZM16c01]
Length = 363
Score = 42.7 bits (99), Expect = 0.031, Method: Composition-based stats.
Identities = 26/58 (44%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S A DL + +IDEKD++ R SG GGQ V K V +THIPT
Sbjct: 209 RRHTSFALVEVVP-DLGEVEDIEIDEKDLKIEIFRASGHGGQNVQKVETAVRITHIPT 265
>gi|334143923|ref|YP_004537079.1| hypothetical protein Thicy_0828 [Thioalkalimicrobium cyclicum ALM1]
gi|333964834|gb|AEG31600.1| hypothetical protein Thicy_0828 [Thioalkalimicrobium cyclicum ALM1]
Length = 364
Score = 42.7 bits (99), Expect = 0.031, Method: Composition-based stats.
Identities = 24/60 (40%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTDS 64
RRH S AS +F ++D + I+ D++ R SG GGQ V KT + V +TH+PT++
Sbjct: 211 RRHTSFAS-VFISPEVDDNVEIDINPADLRIDVYRASGAGGQHVNKTESAVRITHLPTNT 269
>gi|345015595|ref|YP_004817949.1| peptide chain release factor 2 [Streptomyces violaceusniger Tu
4113]
gi|344041944|gb|AEM87669.1| Peptide chain release factor 2 [Streptomyces violaceusniger Tu
4113]
Length = 370
Score = 42.7 bits (99), Expect = 0.031, Method: Composition-based stats.
Identities = 19/36 (52%), Positives = 25/36 (69%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+IDE +++ R SGPGGQ V T++ V LTHIPT
Sbjct: 232 EIDESELRVDVYRSSGPGGQGVNTTDSAVRLTHIPT 267
>gi|331000229|ref|ZP_08323913.1| peptide chain release factor 2 [Parasutterella excrementihominis
YIT 11859]
gi|329572395|gb|EGG54048.1| peptide chain release factor 2 [Parasutterella excrementihominis
YIT 11859]
Length = 280
Score = 42.7 bits (99), Expect = 0.031, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S AS +F ++D S +++ D++ R SG GGQ + KT++ V +THIPT
Sbjct: 127 RRHTSFAS-VFVVPEVDDSFEIEVNPADLRIDTFRASGAGGQHIQKTDSAVRITHIPT 183
>gi|303257507|ref|ZP_07343519.1| peptide chain release factor 2 [Burkholderiales bacterium 1_1_47]
gi|302859477|gb|EFL82556.1| peptide chain release factor 2 [Burkholderiales bacterium 1_1_47]
Length = 348
Score = 42.7 bits (99), Expect = 0.031, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S AS +F ++D S +++ D++ R SG GGQ + KT++ V +THIPT
Sbjct: 195 RRHTSFAS-VFVVPEVDDSFEIEVNPADLRIDTFRASGAGGQHIQKTDSAVRITHIPT 251
>gi|338974709|ref|ZP_08630067.1| peptide chain release factor 2 [Bradyrhizobiaceae bacterium SG-6C]
gi|338232304|gb|EGP07436.1| peptide chain release factor 2 [Bradyrhizobiaceae bacterium SG-6C]
Length = 322
Score = 42.4 bits (98), Expect = 0.032, Method: Composition-based stats.
Identities = 27/59 (45%), Positives = 35/59 (59%), Gaps = 3/59 (5%)
Query: 5 RRHLSLAS-SLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S +S ++F D D K+ I E D++ +R G GGQ V KT + V LTHIPT
Sbjct: 156 RRHTSFSSVAIFPVVD-DSIKI-DIKEADVRTDTMRSGGAGGQHVNKTESAVRLTHIPT 212
>gi|126643323|ref|YP_001086307.1| peptide chain release factor 2 [Acinetobacter baumannii ATCC 17978]
Length = 278
Score = 42.4 bits (98), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S S++F ++D + I+ D++ R SG GGQ + KT++ V LTHIPT
Sbjct: 130 RRHTSF-SAVFISPEVDDNIEIDINPSDVRTDTYRASGAGGQHINKTDSAVRLTHIPT 186
>gi|389783420|ref|ZP_10194792.1| peptide chain release factor 2 [Rhodanobacter spathiphylli B39]
gi|388434683|gb|EIL91617.1| peptide chain release factor 2 [Rhodanobacter spathiphylli B39]
Length = 364
Score = 42.4 bits (98), Expect = 0.032, Method: Composition-based stats.
Identities = 24/60 (40%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTDS 64
RRH S +S+F ++D I+ D++ R SG GGQ V KT + V +THIPT++
Sbjct: 202 RRHTSF-TSVFVSPEVDDDIEIDINPADLKTDVYRSSGAGGQHVNKTESAVRITHIPTNT 260
>gi|353241377|emb|CCA73196.1| related to MRF1-peptide chain release factor, mitochondrial
[Piriformospora indica DSM 11827]
Length = 456
Score = 42.4 bits (98), Expect = 0.032, Method: Composition-based stats.
Identities = 19/35 (54%), Positives = 24/35 (68%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+DEKD++ +R G GGQ V KT + V LTHIPT
Sbjct: 313 VDEKDVKVEVMRARGAGGQHVNKTESAVRLTHIPT 347
>gi|344207289|ref|YP_004792430.1| peptide chain release factor 2 [Stenotrophomonas maltophilia JV3]
gi|343778651|gb|AEM51204.1| peptide chain release factor 2 [Stenotrophomonas maltophilia JV3]
Length = 374
Score = 42.4 bits (98), Expect = 0.032, Method: Composition-based stats.
Identities = 24/59 (40%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTD 63
RRH S +S+F ++D + I+ D++ R SG GGQ V KT + V +THIPT+
Sbjct: 212 RRHTSF-TSVFVSPEIDDNIDITINPADLRTDVYRSSGAGGQHVNKTESAVRITHIPTN 269
>gi|329296879|ref|ZP_08254215.1| peptide chain release factor 1 [Plautia stali symbiont]
Length = 293
Score = 42.4 bits (98), Expect = 0.032, Method: Composition-based stats.
Identities = 25/59 (42%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTD 63
RRH S SS+F ++D S +I+ D++ R SG GGQ V KT + V +TH+PT+
Sbjct: 140 RRHTSF-SSVFIYPEVDDSIDIEINPADLRIDVYRASGAGGQHVNKTESAVRITHLPTN 197
>gi|297194069|ref|ZP_06911467.1| peptide chain release factor 2 [Streptomyces pristinaespiralis ATCC
25486]
gi|297152097|gb|EDY64812.2| peptide chain release factor 2 [Streptomyces pristinaespiralis ATCC
25486]
Length = 340
Score = 42.4 bits (98), Expect = 0.032, Method: Composition-based stats.
Identities = 19/36 (52%), Positives = 25/36 (69%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+IDE +++ R SGPGGQ V T++ V LTHIPT
Sbjct: 204 EIDESELRVDVYRASGPGGQGVNTTDSAVRLTHIPT 239
>gi|194365600|ref|YP_002028210.1| peptide chain release factor 2 [Stenotrophomonas maltophilia
R551-3]
gi|238693429|sp|B4SHV0.1|RF2_STRM5 RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|194348404|gb|ACF51527.1| conserved hypothetical protein [Stenotrophomonas maltophilia
R551-3]
Length = 374
Score = 42.4 bits (98), Expect = 0.032, Method: Composition-based stats.
Identities = 24/59 (40%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTD 63
RRH S +S+F ++D + I+ D++ R SG GGQ V KT + V +THIPT+
Sbjct: 212 RRHTSF-TSVFVSPEIDDNIDITINPADLRTDVYRSSGAGGQHVNKTESAVRITHIPTN 269
>gi|21221417|ref|NP_627196.1| peptide chain release factor 2 [Streptomyces coelicolor A3(2)]
gi|289771299|ref|ZP_06530677.1| peptide chain release factor 2 [Streptomyces lividans TK24]
gi|19864260|sp|Q53915.2|RF2_STRCO RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|6912002|emb|CAB72218.1| chain release factor 2 [Streptomyces coelicolor A3(2)]
gi|289701498|gb|EFD68927.1| peptide chain release factor 2 [Streptomyces lividans TK24]
Length = 368
Score = 42.4 bits (98), Expect = 0.032, Method: Composition-based stats.
Identities = 19/36 (52%), Positives = 25/36 (69%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+IDE +++ R SGPGGQ V T++ V LTHIPT
Sbjct: 232 EIDESELRVDVYRSSGPGGQGVNTTDSAVRLTHIPT 267
>gi|121608134|ref|YP_995941.1| peptide chain release factor 2 [Verminephrobacter eiseniae EF01-2]
gi|121552774|gb|ABM56923.1| bacterial peptide chain release factor 2 (bRF-2) [Verminephrobacter
eiseniae EF01-2]
Length = 381
Score = 42.4 bits (98), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 6 RHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RH S AS LF ++D S I+ D++ R SG GGQ + KT++ V LTH+PT
Sbjct: 229 RHTSFAS-LFVYPEIDDSIQIDINPADVRTDTFRSSGAGGQHINKTDSAVRLTHLPT 284
>gi|58696790|ref|ZP_00372322.1| peptide chain release factor 2 [Wolbachia endosymbiont of
Drosophila simulans]
gi|58698424|ref|ZP_00373334.1| peptide chain release factor 2 [Wolbachia endosymbiont of
Drosophila ananassae]
gi|58698511|ref|ZP_00373415.1| peptide chain release factor 2 [Wolbachia endosymbiont of
Drosophila ananassae]
gi|225630212|ref|YP_002727003.1| Protein chain release factor B [Wolbachia sp. wRi]
gi|58534979|gb|EAL59074.1| peptide chain release factor 2 [Wolbachia endosymbiont of
Drosophila ananassae]
gi|58535047|gb|EAL59136.1| peptide chain release factor 2 [Wolbachia endosymbiont of
Drosophila ananassae]
gi|58537012|gb|EAL60158.1| peptide chain release factor 2 [Wolbachia endosymbiont of
Drosophila simulans]
gi|225592193|gb|ACN95212.1| Protein chain release factor B [Wolbachia sp. wRi]
Length = 336
Score = 42.4 bits (98), Expect = 0.033, Method: Composition-based stats.
Identities = 25/58 (43%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+RH S AS D + +DEKD++ R SG GGQ V KT + V +THIPT
Sbjct: 182 KRHTSFASVGVTPVIEDSIDI-AVDEKDLKIDTYRASGAGGQHVNKTESAVRITHIPT 238
>gi|414167018|ref|ZP_11423248.1| peptide chain release factor 2 [Afipia clevelandensis ATCC 49720]
gi|410892296|gb|EKS40091.1| peptide chain release factor 2 [Afipia clevelandensis ATCC 49720]
Length = 322
Score = 42.4 bits (98), Expect = 0.033, Method: Composition-based stats.
Identities = 27/59 (45%), Positives = 35/59 (59%), Gaps = 3/59 (5%)
Query: 5 RRHLSLAS-SLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S +S ++F D D K+ I E D++ +R G GGQ V KT + V LTHIPT
Sbjct: 156 RRHTSFSSVAIFPVVD-DSIKI-DIKEADVRTDTMRSGGAGGQHVNKTESAVRLTHIPT 212
>gi|333374725|ref|ZP_08466560.1| peptide chain release factor RF2 [Kingella kingae ATCC 23330]
gi|381400380|ref|ZP_09925350.1| peptide chain release factor 2 [Kingella kingae PYKK081]
gi|332974657|gb|EGK11574.1| peptide chain release factor RF2 [Kingella kingae ATCC 23330]
gi|380834600|gb|EIC14435.1| peptide chain release factor 2 [Kingella kingae PYKK081]
Length = 367
Score = 42.4 bits (98), Expect = 0.033, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+RH S SS+F ++D S +I+ D++ R SG GGQ + KT++ V +THIPT
Sbjct: 214 KRHTSF-SSVFVYPEVDDSFEVEINPADLRTDTYRASGAGGQHINKTDSAVRITHIPT 270
>gi|329936498|ref|ZP_08286234.1| peptide chain release factor 2 [Streptomyces griseoaurantiacus
M045]
gi|329304013|gb|EGG47895.1| peptide chain release factor 2 [Streptomyces griseoaurantiacus
M045]
Length = 368
Score = 42.4 bits (98), Expect = 0.033, Method: Composition-based stats.
Identities = 19/36 (52%), Positives = 25/36 (69%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+IDE +++ R SGPGGQ V T++ V LTHIPT
Sbjct: 232 EIDESELRVDVYRSSGPGGQGVNTTDSAVRLTHIPT 267
>gi|225847994|ref|YP_002728157.1| peptide chain release factor 2 [Sulfurihydrogenibium azorense
Az-Fu1]
gi|225644274|gb|ACN99324.1| peptide chain release factor 2 [Sulfurihydrogenibium azorense
Az-Fu1]
Length = 370
Score = 42.4 bits (98), Expect = 0.033, Method: Composition-based stats.
Identities = 27/59 (45%), Positives = 39/59 (66%), Gaps = 3/59 (5%)
Query: 5 RRHLSLAS-SLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S A+ S+ + D + KV +I+E+D++ R SG GGQ V KT++ V +THIPT
Sbjct: 211 RRHTSFAAVSVIPEIDEEI-KV-EINEEDLRIDTFRASGAGGQHVNKTDSAVRITHIPT 267
>gi|295395219|ref|ZP_06805427.1| peptide chain release factor RF2 [Brevibacterium mcbrellneri ATCC
49030]
gi|294971981|gb|EFG47848.1| peptide chain release factor RF2 [Brevibacterium mcbrellneri ATCC
49030]
Length = 376
Score = 42.4 bits (98), Expect = 0.033, Method: Composition-based stats.
Identities = 18/35 (51%), Positives = 25/35 (71%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
IDE D++ R SGPGGQ+V T++ V +TH+PT
Sbjct: 232 IDENDLRIDVFRSSGPGGQSVNTTDSAVRITHVPT 266
>gi|302551795|ref|ZP_07304137.1| peptide chain release factor 2 [Streptomyces viridochromogenes DSM
40736]
gi|302469413|gb|EFL32506.1| peptide chain release factor 2 [Streptomyces viridochromogenes DSM
40736]
Length = 368
Score = 42.4 bits (98), Expect = 0.033, Method: Composition-based stats.
Identities = 19/36 (52%), Positives = 25/36 (69%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+IDE +++ R SGPGGQ V T++ V LTHIPT
Sbjct: 232 EIDESELRVDVYRSSGPGGQGVNTTDSAVRLTHIPT 267
>gi|121703728|ref|XP_001270128.1| peptidyl-tRNA hydrolase domain protein [Aspergillus clavatus NRRL
1]
gi|119398272|gb|EAW08702.1| peptidyl-tRNA hydrolase domain protein [Aspergillus clavatus NRRL
1]
Length = 203
Score = 42.4 bits (98), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 26/36 (72%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
KI++ D+ +++G+GPGGQ + KTN+ V L H PT
Sbjct: 45 KINDADLTISYLKGTGPGGQKINKTNSAVQLIHKPT 80
>gi|92117370|ref|YP_577099.1| peptide chain release factor 2 [Nitrobacter hamburgensis X14]
gi|91800264|gb|ABE62639.1| bacterial peptide chain release factor 2 (bRF-2) [Nitrobacter
hamburgensis X14]
Length = 322
Score = 42.4 bits (98), Expect = 0.034, Method: Composition-based stats.
Identities = 27/59 (45%), Positives = 35/59 (59%), Gaps = 3/59 (5%)
Query: 5 RRHLSLAS-SLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S +S ++F D D K+ I E D++ +R G GGQ V KT + V LTHIPT
Sbjct: 156 RRHTSFSSVAIFPVVD-DSIKI-DIKESDVRTDTMRSGGAGGQHVNKTESAVRLTHIPT 212
>gi|223936544|ref|ZP_03628455.1| Class I peptide chain release factor [bacterium Ellin514]
gi|223894708|gb|EEF61158.1| Class I peptide chain release factor [bacterium Ellin514]
Length = 120
Score = 42.4 bits (98), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 26/40 (65%)
Query: 24 KVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTD 63
K+ ++E +++E F R SGPGGQ V K V L H+PT+
Sbjct: 3 KIFALNEAELEETFSRSSGPGGQNVNKVATRVTLRHLPTN 42
>gi|414173271|ref|ZP_11428034.1| peptide chain release factor 2 [Afipia broomeae ATCC 49717]
gi|410891923|gb|EKS39719.1| peptide chain release factor 2 [Afipia broomeae ATCC 49717]
Length = 322
Score = 42.4 bits (98), Expect = 0.034, Method: Composition-based stats.
Identities = 27/59 (45%), Positives = 35/59 (59%), Gaps = 3/59 (5%)
Query: 5 RRHLSLAS-SLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S +S ++F D D K+ I E D++ +R G GGQ V KT + V LTHIPT
Sbjct: 156 RRHTSFSSVAIFPVVD-DSIKI-DIKESDVRTDTMRSGGAGGQHVNKTESAVRLTHIPT 212
>gi|418054365|ref|ZP_12692421.1| Class I peptide chain release factor [Hyphomicrobium
denitrificans 1NES1]
gi|353211990|gb|EHB77390.1| Class I peptide chain release factor [Hyphomicrobium
denitrificans 1NES1]
Length = 139
Score = 42.4 bits (98), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 22/30 (73%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVL 57
IDE +I+ERF+R SGPGGQ V K + V L
Sbjct: 9 IDEAEIEERFIRASGPGGQNVNKVSTAVEL 38
>gi|399216586|emb|CCF73273.1| unnamed protein product [Babesia microti strain RI]
Length = 1420
Score = 42.4 bits (98), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 30/49 (61%), Gaps = 4/49 (8%)
Query: 15 FRKYDLDYSKVP----KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTH 59
FR ++ Y P + + +E+F++GSGPGGQ + K+++CV L H
Sbjct: 22 FRLTNIKYLNKPIFTNSLKADEFEEKFIKGSGPGGQKINKSSSCVQLIH 70
>gi|300023998|ref|YP_003756609.1| class I peptide chain release factor [Hyphomicrobium
denitrificans ATCC 51888]
gi|299525819|gb|ADJ24288.1| Class I peptide chain release factor [Hyphomicrobium
denitrificans ATCC 51888]
Length = 139
Score = 42.4 bits (98), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 23/31 (74%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVL 57
+IDE +I+ERF+R SGPGGQ V K + V L
Sbjct: 8 EIDEAEIEERFIRASGPGGQNVNKVSTAVEL 38
>gi|1402638|dbj|BAA13170.1| PrfB [Streptomyces coelicolor]
Length = 368
Score = 42.4 bits (98), Expect = 0.034, Method: Composition-based stats.
Identities = 19/36 (52%), Positives = 25/36 (69%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+IDE +++ R SGPGGQ V T++ V LTHIPT
Sbjct: 232 EIDESELRVDVYRSSGPGGQGVNTTDSAVRLTHIPT 267
>gi|425735918|ref|ZP_18854229.1| peptide chain release factor 2 [Brevibacterium casei S18]
gi|425479152|gb|EKU46332.1| peptide chain release factor 2 [Brevibacterium casei S18]
Length = 372
Score = 42.4 bits (98), Expect = 0.034, Method: Composition-based stats.
Identities = 18/36 (50%), Positives = 26/36 (72%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
++DE D++ R SGPGGQ+V T++ V +THIPT
Sbjct: 232 EVDENDLRIDVYRSSGPGGQSVNTTDSAVRITHIPT 267
>gi|99035041|ref|ZP_01314835.1| hypothetical protein Wendoof_01000330 [Wolbachia endosymbiont of
Drosophila willistoni TSC#14030-0811.24]
Length = 336
Score = 42.4 bits (98), Expect = 0.034, Method: Composition-based stats.
Identities = 25/58 (43%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+RH S AS D + +DEKD++ R SG GGQ V KT + V +THIPT
Sbjct: 182 KRHTSFASVGVTPVIEDSIDI-AVDEKDLKIDTYRASGAGGQHVNKTESAVRITHIPT 238
>gi|56552405|ref|YP_163244.1| peptide chain release factor 1 [Zymomonas mobilis subsp. mobilis
ZM4]
gi|260753918|ref|YP_003226811.1| peptide chain release factor 1 [Zymomonas mobilis subsp. mobilis
NCIMB 11163]
gi|384412513|ref|YP_005621878.1| peptide chain release factor 1 [Zymomonas mobilis subsp. mobilis
ATCC 10988]
gi|81598182|sp|Q5NMC7.1|RF1_ZYMMO RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|56543979|gb|AAV90133.1| peptide chain release factor 1 [Zymomonas mobilis subsp. mobilis
ZM4]
gi|258553281|gb|ACV76227.1| peptide chain release factor 1 [Zymomonas mobilis subsp. mobilis
NCIMB 11163]
gi|335932887|gb|AEH63427.1| peptide chain release factor 1 [Zymomonas mobilis subsp. mobilis
ATCC 10988]
Length = 358
Score = 42.4 bits (98), Expect = 0.035, Method: Composition-based stats.
Identities = 18/35 (51%), Positives = 26/35 (74%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
IDE+D++ R SGPGGQ+V T++ V +THIP+
Sbjct: 216 IDERDLRIDIFRSSGPGGQSVNTTDSAVRITHIPS 250
>gi|397677429|ref|YP_006518967.1| peptide chain release factor 1 [Zymomonas mobilis subsp. mobilis
ATCC 29191]
gi|395398118|gb|AFN57445.1| Peptide chain release factor 1 [Zymomonas mobilis subsp. mobilis
ATCC 29191]
Length = 358
Score = 42.4 bits (98), Expect = 0.035, Method: Composition-based stats.
Identities = 18/35 (51%), Positives = 26/35 (74%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
IDE+D++ R SGPGGQ+V T++ V +THIP+
Sbjct: 216 IDERDLRIDIFRSSGPGGQSVNTTDSAVRITHIPS 250
>gi|224543374|ref|ZP_03683913.1| hypothetical protein CATMIT_02574 [Catenibacterium mitsuokai DSM
15897]
gi|224523701|gb|EEF92806.1| peptide chain release factor 2 [Catenibacterium mitsuokai DSM
15897]
Length = 371
Score = 42.4 bits (98), Expect = 0.035, Method: Composition-based stats.
Identities = 25/60 (41%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTDS 64
RRH S AS +LD ID K+++ R SG GGQ + KT++ V +THIPT++
Sbjct: 211 RRHTSFASVEVSP-ELDDDIEITIDPKNLRIDTYRASGAGGQHINKTDSAVRITHIPTNT 269
>gi|171463253|ref|YP_001797366.1| peptide chain release factor 2 [Polynucleobacter necessarius subsp.
necessarius STIR1]
gi|171192791|gb|ACB43752.1| peptide chain release factor 2 [Polynucleobacter necessarius subsp.
necessarius STIR1]
Length = 349
Score = 42.4 bits (98), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 6 RHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RH S AS ++ ++D S +++ DI+ R SG GGQ + KT++ V LTHIPT
Sbjct: 197 RHTSFAS-IYVYPEIDDSIEIEVNPADIRTDTYRASGAGGQHINKTDSAVRLTHIPT 252
>gi|94264473|ref|ZP_01288261.1| Peptide chain release factor 2 [delta proteobacterium MLMS-1]
gi|93455104|gb|EAT05328.1| Peptide chain release factor 2 [delta proteobacterium MLMS-1]
Length = 303
Score = 42.4 bits (98), Expect = 0.035, Method: Composition-based stats.
Identities = 23/58 (39%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S AS +F +L ++++KD++ R SG GGQ V KT++ + +TH+PT
Sbjct: 150 RRHTSFAS-VFIFPELTDDIAVEVNDKDLRIDTFRASGAGGQHVNKTSSAIRITHLPT 206
>gi|121603978|ref|YP_981307.1| peptide chain release factor 2 [Polaromonas naphthalenivorans CJ2]
gi|120592947|gb|ABM36386.1| bacterial peptide chain release factor 2 (bRF-2) [Polaromonas
naphthalenivorans CJ2]
Length = 347
Score = 42.4 bits (98), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 6 RHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RH S AS +F ++D S I+ D++ R SG GGQ + KT++ V LTHIPT
Sbjct: 195 RHTSFAS-VFVYPEIDDSIEIDINPADVRTDTYRASGAGGQHINKTDSAVRLTHIPT 250
>gi|402496775|ref|YP_006556035.1| protein chain release factor B [Wolbachia endosymbiont of
Onchocerca ochengi]
gi|398650048|emb|CCF78218.1| protein chain release factor B [Wolbachia endosymbiont of
Onchocerca ochengi]
Length = 284
Score = 42.4 bits (98), Expect = 0.036, Method: Composition-based stats.
Identities = 25/58 (43%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+RH S AS D + +DEKD++ R SG GGQ V KT + V +THIPT
Sbjct: 130 KRHTSFASVGVTPVIEDSIDI-AVDEKDLRIDTYRASGAGGQHVNKTESAVRITHIPT 186
>gi|296140715|ref|YP_003647958.1| peptide chain release factor 2 [Tsukamurella paurometabola DSM
20162]
gi|296028849|gb|ADG79619.1| peptide chain release factor 2 [Tsukamurella paurometabola DSM
20162]
Length = 371
Score = 42.4 bits (98), Expect = 0.036, Method: Composition-based stats.
Identities = 18/35 (51%), Positives = 25/35 (71%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+DE +++ R SGPGGQ+V T++ V LTHIPT
Sbjct: 235 VDENEVRVDVYRSSGPGGQSVNTTDSAVRLTHIPT 269
>gi|441190704|ref|ZP_20970707.1| peptide chain release factor 2 [Streptomyces rimosus subsp. rimosus
ATCC 10970]
gi|440613705|gb|ELQ77097.1| peptide chain release factor 2 [Streptomyces rimosus subsp. rimosus
ATCC 10970]
Length = 370
Score = 42.4 bits (98), Expect = 0.036, Method: Composition-based stats.
Identities = 19/36 (52%), Positives = 25/36 (69%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+IDE +++ R SGPGGQ V T++ V LTHIPT
Sbjct: 232 EIDESELRVDVYRSSGPGGQGVNTTDSAVRLTHIPT 267
>gi|366053902|ref|ZP_09451624.1| peptide chain release factor 2 [Lactobacillus suebicus KCTC 3549]
Length = 332
Score = 42.4 bits (98), Expect = 0.036, Method: Composition-based stats.
Identities = 25/58 (43%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S AS +LD S I + D++ R SG GGQ + KT++ V +THIPT
Sbjct: 172 RRHTSFASVDVMP-ELDDSTNVDISDDDLRVDVFRSSGAGGQHINKTSSAVRITHIPT 228
>gi|163783151|ref|ZP_02178145.1| peptide chain release factor RF-2 [Hydrogenivirga sp. 128-5-R1-1]
gi|159881485|gb|EDP74995.1| peptide chain release factor RF-2 [Hydrogenivirga sp. 128-5-R1-1]
Length = 367
Score = 42.4 bits (98), Expect = 0.036, Method: Composition-based stats.
Identities = 27/66 (40%), Positives = 34/66 (51%), Gaps = 17/66 (25%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDE--------KDIQERFVRGSGPGGQAVAKTNNCVV 56
RRH S A+ S +P+IDE +D++ R SG GGQ V KT+ V
Sbjct: 208 RRHTSFAA---------VSVMPQIDEDINIEVRDEDLKIETFRASGAGGQYVNKTDTAVR 258
Query: 57 LTHIPT 62
LTHIPT
Sbjct: 259 LTHIPT 264
>gi|312199813|ref|YP_004019874.1| peptide chain release factor 2 [Frankia sp. EuI1c]
gi|311231149|gb|ADP84004.1| peptide chain release factor 2 [Frankia sp. EuI1c]
Length = 367
Score = 42.4 bits (98), Expect = 0.036, Method: Composition-based stats.
Identities = 18/35 (51%), Positives = 25/35 (71%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
ID+KD++ R SGPGGQ V T++ V +TH+PT
Sbjct: 228 IDDKDLRVDIFRSSGPGGQGVNTTDSAVRITHLPT 262
>gi|119715986|ref|YP_922951.1| peptide chain release factor 1 [Nocardioides sp. JS614]
gi|166223579|sp|A1SHH9.1|RF1_NOCSJ RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|119536647|gb|ABL81264.1| bacterial peptide chain release factor 1 (bRF-1) [Nocardioides sp.
JS614]
Length = 357
Score = 42.4 bits (98), Expect = 0.036, Method: Composition-based stats.
Identities = 18/36 (50%), Positives = 26/36 (72%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+IDE D++ R SGPGGQ+V T++ V +TH+PT
Sbjct: 215 QIDENDLRIDVFRSSGPGGQSVNTTDSAVRITHLPT 250
>gi|30249212|ref|NP_841282.1| peptide chain release factor 2 [Nitrosomonas europaea ATCC 19718]
gi|30180531|emb|CAD85140.1| Peptide chain release factor 2 [Nitrosomonas europaea ATCC 19718]
Length = 347
Score = 42.4 bits (98), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S AS +F ++D S I+ D++ R SG GGQ + KT++ V +THIPT
Sbjct: 194 RRHTSFAS-VFVYPEVDDSIEIDINPADLRVDTFRASGAGGQHINKTDSAVRITHIPT 250
>gi|302544934|ref|ZP_07297276.1| peptide chain release factor 2 [Streptomyces hygroscopicus ATCC
53653]
gi|302462552|gb|EFL25645.1| peptide chain release factor 2 [Streptomyces himastatinicus ATCC
53653]
Length = 370
Score = 42.4 bits (98), Expect = 0.037, Method: Composition-based stats.
Identities = 19/36 (52%), Positives = 25/36 (69%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+IDE +++ R SGPGGQ V T++ V LTHIPT
Sbjct: 232 EIDESELRIDVYRSSGPGGQGVNTTDSAVRLTHIPT 267
>gi|256842745|ref|ZP_05548233.1| peptide chain release factor 2 [Lactobacillus crispatus 125-2-CHN]
gi|256614165|gb|EEU19366.1| peptide chain release factor 2 [Lactobacillus crispatus 125-2-CHN]
Length = 354
Score = 42.4 bits (98), Expect = 0.037, Method: Composition-based stats.
Identities = 25/58 (43%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S AS ++D S ID KD++ R SG GGQ + KT++ V +TH+PT
Sbjct: 194 RRHTSFASVEVIP-EVDDSIQIDIDPKDLRVDVYRSSGAGGQHINKTSSAVRITHLPT 250
>gi|90580579|ref|ZP_01236384.1| putative peptide chain release factor 2 [Photobacterium angustum
S14]
gi|90438237|gb|EAS63423.1| putative peptide chain release factor 2 [Photobacterium angustum
S14]
Length = 353
Score = 42.4 bits (98), Expect = 0.037, Method: Composition-based stats.
Identities = 24/59 (40%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTD 63
RRH S AS+ F ++D + V I+ D++ R SG GGQ V T + V +TH+PT+
Sbjct: 200 RRHTSFASA-FVYPEIDDNIVIDINPSDLRIDVYRASGAGGQHVNTTESAVRITHLPTN 257
>gi|114331309|ref|YP_747531.1| peptide chain release factor 2 [Nitrosomonas eutropha C91]
gi|114308323|gb|ABI59566.1| bacterial peptide chain release factor 2 (bRF-2) [Nitrosomonas
eutropha C91]
Length = 348
Score = 42.4 bits (98), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S AS +F ++D S I+ D++ R SG GGQ + KT++ V +THIPT
Sbjct: 195 RRHTSFAS-VFVYPEVDDSIEIDINPADLRVDTYRASGAGGQHINKTDSAVRITHIPT 251
>gi|253827969|ref|ZP_04870854.1| peptide chain release factor 2 [Helicobacter canadensis MIT
98-5491]
gi|313142536|ref|ZP_07804729.1| peptide chain release factor 2 [Helicobacter canadensis MIT
98-5491]
gi|253511375|gb|EES90034.1| peptide chain release factor 2 [Helicobacter canadensis MIT
98-5491]
gi|313131567|gb|EFR49184.1| peptide chain release factor 2 [Helicobacter canadensis MIT
98-5491]
Length = 363
Score = 42.4 bits (98), Expect = 0.037, Method: Composition-based stats.
Identities = 23/58 (39%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+RH S AS ++D + +I+EKD++ R SG GGQ + KT + + +THIPT
Sbjct: 209 KRHTSFASVQVTP-EIDDNISIEIEEKDLRIDTYRASGAGGQHINKTESAIRITHIPT 265
>gi|421466491|ref|ZP_15915170.1| peptide chain release factor 2 [Acinetobacter radioresistens
WC-A-157]
gi|400203271|gb|EJO34264.1| peptide chain release factor 2 [Acinetobacter radioresistens
WC-A-157]
Length = 351
Score = 42.4 bits (98), Expect = 0.038, Method: Composition-based stats.
Identities = 23/58 (39%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S S++F ++D + I+ D++ R SG GGQ + KT++ V LTH+PT
Sbjct: 198 RRHTSF-SAVFVSPEVDDNIEIDINPSDVRTDTYRASGAGGQHINKTDSAVRLTHMPT 254
>gi|378731006|gb|EHY57465.1| peptide chain release factor RF-2 [Exophiala dermatitidis
NIH/UT8656]
Length = 314
Score = 42.4 bits (98), Expect = 0.038, Method: Composition-based stats.
Identities = 16/37 (43%), Positives = 26/37 (70%)
Query: 26 PKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
P + + +I +++G+GPGGQ + KTN+ LTH+PT
Sbjct: 180 PTLPDSEIHHVYLKGTGPGGQKINKTNSAAQLTHLPT 216
>gi|269128206|ref|YP_003301576.1| peptide chain release factor 2 [Thermomonospora curvata DSM 43183]
gi|268313164|gb|ACY99538.1| peptide chain release factor 2 [Thermomonospora curvata DSM 43183]
Length = 378
Score = 42.4 bits (98), Expect = 0.038, Method: Composition-based stats.
Identities = 18/36 (50%), Positives = 25/36 (69%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
++DE D++ R SGPGGQ V T++ V +THIPT
Sbjct: 232 EVDENDLRIDVYRSSGPGGQGVNTTDSAVRITHIPT 267
>gi|115380059|ref|ZP_01467103.1| peptide chain release factor 2, programmed [Stigmatella aurantiaca
DW4/3-1]
gi|115362934|gb|EAU62125.1| peptide chain release factor 2, programmed [Stigmatella aurantiaca
DW4/3-1]
Length = 309
Score = 42.4 bits (98), Expect = 0.038, Method: Composition-based stats.
Identities = 20/45 (44%), Positives = 29/45 (64%)
Query: 19 DLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTD 63
++D S I EKD + +F+RG G GGQ V KT++ L H+PT+
Sbjct: 159 EVDDSIRIDIPEKDYELKFIRGGGAGGQKVNKTSSTAQLRHLPTN 203
>gi|452993792|emb|CCQ94608.1| Peptide chain release factor 2 [Clostridium ultunense Esp]
Length = 346
Score = 42.4 bits (98), Expect = 0.038, Method: Composition-based stats.
Identities = 26/59 (44%), Positives = 35/59 (59%), Gaps = 3/59 (5%)
Query: 5 RRHLSLAS-SLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S AS ++ + D D +I+E DI+ R SG GGQ V T++ V +THIPT
Sbjct: 191 RRHTSFASIDIYPELDDDMDI--EINESDIKIDTYRASGAGGQHVNTTDSAVRVTHIPT 247
>gi|429759674|ref|ZP_19292170.1| peptide chain release factor 2 [Veillonella atypica KON]
gi|429179264|gb|EKY20520.1| peptide chain release factor 2 [Veillonella atypica KON]
Length = 330
Score = 42.4 bits (98), Expect = 0.038, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S A+ ++D + ID KD+Q R SG GGQ + KT++ V +TH PT
Sbjct: 172 RRHTSFAAVDVMP-EIDDTVEINIDMKDVQVDTYRASGAGGQHINKTDSAVRMTHKPT 228
>gi|255320321|ref|ZP_05361506.1| peptide chain release factor 2 [Acinetobacter radioresistens SK82]
gi|421856199|ref|ZP_16288568.1| peptide chain release factor 2 [Acinetobacter radioresistens DSM
6976 = NBRC 102413]
gi|255302760|gb|EET81992.1| peptide chain release factor 2 [Acinetobacter radioresistens SK82]
gi|403188449|dbj|GAB74769.1| peptide chain release factor 2 [Acinetobacter radioresistens DSM
6976 = NBRC 102413]
Length = 351
Score = 42.4 bits (98), Expect = 0.038, Method: Composition-based stats.
Identities = 23/58 (39%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S S++F ++D + I+ D++ R SG GGQ + KT++ V LTH+PT
Sbjct: 198 RRHTSF-SAVFVSPEVDDNIEIDINPSDVRTDTYRASGAGGQHINKTDSAVRLTHMPT 254
>gi|227514375|ref|ZP_03944424.1| peptide chain release factor RF2 [Lactobacillus fermentum ATCC
14931]
gi|227087241|gb|EEI22553.1| peptide chain release factor RF2 [Lactobacillus fermentum ATCC
14931]
Length = 355
Score = 42.4 bits (98), Expect = 0.039, Method: Composition-based stats.
Identities = 26/61 (42%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Query: 2 SIFRRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIP 61
S RRH S AS LD S +ID D++ R SG GGQ + KT + V +TH+P
Sbjct: 192 SAARRHTSFASVDVMPI-LDESIEVEIDPSDLRVDTFRASGAGGQHINKTESAVRITHLP 250
Query: 62 T 62
T
Sbjct: 251 T 251
>gi|184154810|ref|YP_001843150.1| peptide chain release factor 2 [Lactobacillus fermentum IFO 3956]
gi|183226154|dbj|BAG26670.1| peptide chain release factor 2 [Lactobacillus fermentum IFO 3956]
Length = 355
Score = 42.4 bits (98), Expect = 0.039, Method: Composition-based stats.
Identities = 26/61 (42%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Query: 2 SIFRRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIP 61
S RRH S AS LD S +ID D++ R SG GGQ + KT + V +TH+P
Sbjct: 192 SAARRHTSFASVDVMPI-LDESIEVEIDPSDLRVDTFRASGAGGQHINKTESAVRITHLP 250
Query: 62 T 62
T
Sbjct: 251 T 251
>gi|89072535|ref|ZP_01159107.1| putative peptide chain release factor 2 [Photobacterium sp. SKA34]
gi|89051639|gb|EAR57092.1| putative peptide chain release factor 2 [Photobacterium sp. SKA34]
Length = 353
Score = 42.4 bits (98), Expect = 0.039, Method: Composition-based stats.
Identities = 24/59 (40%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTD 63
RRH S AS+ F ++D + V I+ D++ R SG GGQ V T + V +TH+PT+
Sbjct: 200 RRHTSFASA-FVYPEIDDNIVIDINPSDLRIDVYRASGAGGQHVNTTESAVRITHLPTN 257
>gi|338708566|ref|YP_004662767.1| peptide chain release factor 1 [Zymomonas mobilis subsp. pomaceae
ATCC 29192]
gi|336295370|gb|AEI38477.1| peptide chain release factor 1 [Zymomonas mobilis subsp. pomaceae
ATCC 29192]
Length = 358
Score = 42.4 bits (98), Expect = 0.039, Method: Composition-based stats.
Identities = 18/35 (51%), Positives = 26/35 (74%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
IDE+D++ R SGPGGQ+V T++ V +THIP+
Sbjct: 216 IDERDLRIDIFRSSGPGGQSVNTTDSAVRITHIPS 250
>gi|336124996|ref|YP_004567044.1| peptide Chain Release factor [Vibrio anguillarum 775]
gi|335342719|gb|AEH34002.1| Bacterial Peptide Chain Release Factor [Vibrio anguillarum 775]
Length = 329
Score = 42.4 bits (98), Expect = 0.039, Method: Composition-based stats.
Identities = 24/60 (40%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTDS 64
RRH S AS+ F ++D + I+ D++ R SG GGQ V T + V +THIPT++
Sbjct: 176 RRHTSFASA-FIYPEIDENIAIDINPADLRIDVYRASGAGGQHVNTTESAVRITHIPTNT 234
>gi|336118678|ref|YP_004573449.1| peptide chain release factor 1 [Microlunatus phosphovorus NM-1]
gi|334686461|dbj|BAK36046.1| peptide chain release factor 1 [Microlunatus phosphovorus NM-1]
Length = 360
Score = 42.4 bits (98), Expect = 0.039, Method: Composition-based stats.
Identities = 23/58 (39%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
R H S A L +++ S+ +IDE D++ R SGPGGQ V T++ V +TH+P+
Sbjct: 197 RVHTSAAGVLVMP-EIEESEGVEIDENDLRIDVYRSSGPGGQGVNTTDSAVRITHLPS 253
>gi|118473158|ref|YP_886446.1| peptide chain release factor 2 [Mycobacterium smegmatis str. MC2
155]
gi|399986457|ref|YP_006566806.1| peptide chain release factor 2 [Mycobacterium smegmatis str. MC2
155]
gi|166225108|sp|A0QU58.1|RF2_MYCS2 RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|118174445|gb|ABK75341.1| peptide chain release factor 2 [Mycobacterium smegmatis str. MC2
155]
gi|399231018|gb|AFP38511.1| Peptide chain release factor 2 [Mycobacterium smegmatis str. MC2
155]
Length = 368
Score = 42.4 bits (98), Expect = 0.039, Method: Composition-based stats.
Identities = 20/36 (55%), Positives = 25/36 (69%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+I E DI+ R SGPGGQ+V T++ V LTHIPT
Sbjct: 231 EIPENDIRVDVYRSSGPGGQSVNTTDSAVRLTHIPT 266
>gi|297171258|gb|ADI22265.1| protein chain release factor B [uncultured Gemmatimonadales
bacterium HF0200_36I24]
gi|297171357|gb|ADI22361.1| protein chain release factor B [uncultured nuHF2 cluster bacterium
HF0500_02A10]
Length = 334
Score = 42.4 bits (98), Expect = 0.039, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S AS D ++ +I E D++ R SG GGQ V KT++ + +THIPT
Sbjct: 172 RRHTSFASVFIYPLVDDEIEI-EIAESDLRVDTFRASGAGGQHVNKTDSAIRITHIPT 228
>gi|310822818|ref|YP_003955176.1| peptide chain release factor 2 [Stigmatella aurantiaca DW4/3-1]
gi|309395890|gb|ADO73349.1| Peptide chain release factor 2 [Stigmatella aurantiaca DW4/3-1]
Length = 380
Score = 42.4 bits (98), Expect = 0.039, Method: Composition-based stats.
Identities = 20/45 (44%), Positives = 29/45 (64%)
Query: 19 DLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTD 63
++D S I EKD + +F+RG G GGQ V KT++ L H+PT+
Sbjct: 230 EVDDSIRIDIPEKDYELKFIRGGGAGGQKVNKTSSTAQLRHLPTN 274
>gi|398785517|ref|ZP_10548476.1| peptide chain release factor 2 [Streptomyces auratus AGR0001]
gi|396994386|gb|EJJ05426.1| peptide chain release factor 2 [Streptomyces auratus AGR0001]
Length = 368
Score = 42.4 bits (98), Expect = 0.040, Method: Composition-based stats.
Identities = 19/36 (52%), Positives = 25/36 (69%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+IDE +++ R SGPGGQ V T++ V LTHIPT
Sbjct: 232 EIDESELRVDVYRSSGPGGQGVNTTDSAVRLTHIPT 267
>gi|365893623|ref|ZP_09431793.1| Peptide chain release factor 2 (RF-2) [Bradyrhizobium sp. STM 3843]
gi|365425557|emb|CCE04335.1| Peptide chain release factor 2 (RF-2) [Bradyrhizobium sp. STM 3843]
Length = 323
Score = 42.4 bits (98), Expect = 0.040, Method: Composition-based stats.
Identities = 27/59 (45%), Positives = 34/59 (57%), Gaps = 3/59 (5%)
Query: 5 RRHLSLAS-SLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S +S +F D D K+ I E D++ +R G GGQ V KT + V LTHIPT
Sbjct: 156 RRHTSFSSVQIFPVID-DSIKI-DIKESDVRTDTMRSGGAGGQHVNKTESAVRLTHIPT 212
>gi|226226590|ref|YP_002760696.1| peptide chain release factor 1 [Gemmatimonas aurantiaca T-27]
gi|226089781|dbj|BAH38226.1| peptide chain release factor 1 [Gemmatimonas aurantiaca T-27]
Length = 356
Score = 42.4 bits (98), Expect = 0.040, Method: Composition-based stats.
Identities = 18/36 (50%), Positives = 27/36 (75%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+I++KD++ R SGPGGQ+V T++ V +THIPT
Sbjct: 217 RIEDKDLRIDVFRSSGPGGQSVNTTDSAVRITHIPT 252
>gi|227487967|ref|ZP_03918283.1| peptide chain release factor 1 [Corynebacterium glucuronolyticum
ATCC 51867]
gi|227542608|ref|ZP_03972657.1| peptide chain release factor 1 [Corynebacterium glucuronolyticum
ATCC 51866]
gi|227092058|gb|EEI27370.1| peptide chain release factor 1 [Corynebacterium glucuronolyticum
ATCC 51867]
gi|227181806|gb|EEI62778.1| peptide chain release factor 1 [Corynebacterium glucuronolyticum
ATCC 51866]
Length = 358
Score = 42.4 bits (98), Expect = 0.040, Method: Composition-based stats.
Identities = 20/36 (55%), Positives = 25/36 (69%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+IDEKDI+ R SG GGQ V T++ V LTH+PT
Sbjct: 217 EIDEKDIRVDVYRSSGKGGQGVNTTDSAVRLTHLPT 252
>gi|422574352|ref|ZP_16649906.1| peptide chain release factor 1 [Propionibacterium acnes HL044PA1]
gi|314927458|gb|EFS91289.1| peptide chain release factor 1 [Propionibacterium acnes HL044PA1]
Length = 388
Score = 42.4 bits (98), Expect = 0.040, Method: Composition-based stats.
Identities = 22/44 (50%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Query: 19 DLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
D+D ++V ID DI+ R SGPGGQ V T++ V LTH+PT
Sbjct: 235 DVDETEV-DIDPADIRVDVYRSSGPGGQGVNTTDSAVRLTHLPT 277
>gi|422439333|ref|ZP_16516156.1| peptide chain release factor 1 [Propionibacterium acnes HL037PA3]
gi|422470819|ref|ZP_16547319.1| peptide chain release factor 1 [Propionibacterium acnes HL037PA2]
gi|313837661|gb|EFS75375.1| peptide chain release factor 1 [Propionibacterium acnes HL037PA2]
gi|314972601|gb|EFT16698.1| peptide chain release factor 1 [Propionibacterium acnes HL037PA3]
Length = 388
Score = 42.4 bits (98), Expect = 0.040, Method: Composition-based stats.
Identities = 22/44 (50%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Query: 19 DLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
D+D ++V ID DI+ R SGPGGQ V T++ V LTH+PT
Sbjct: 235 DVDETEV-DIDPADIRVDVYRSSGPGGQGVNTTDSAVRLTHLPT 277
>gi|262380518|ref|ZP_06073672.1| peptide chain release factor 2 [Acinetobacter radioresistens SH164]
gi|262297964|gb|EEY85879.1| peptide chain release factor 2 [Acinetobacter radioresistens SH164]
Length = 310
Score = 42.4 bits (98), Expect = 0.040, Method: Composition-based stats.
Identities = 23/58 (39%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S S++F ++D + I+ D++ R SG GGQ + KT++ V LTH+PT
Sbjct: 157 RRHTSF-SAVFVSPEVDDNIEIDINPSDVRTDTYRASGAGGQHINKTDSAVRLTHMPT 213
>gi|52840422|ref|YP_094221.1| peptide chain release factor [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
gi|378776125|ref|YP_005184555.1| peptide chain release factor [Legionella pneumophila subsp.
pneumophila ATCC 43290]
gi|52627533|gb|AAU26274.1| peptide chain release factor [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
gi|364506932|gb|AEW50456.1| peptide chain release factor [Legionella pneumophila subsp.
pneumophila ATCC 43290]
Length = 136
Score = 42.4 bits (98), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 24/35 (68%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
I E D+ E+F+ GSG GGQ + KT + V L H+PT
Sbjct: 19 IYETDLSEKFILGSGKGGQKLHKTASTVYLKHLPT 53
>gi|418460746|ref|ZP_13031834.1| peptide chain release factor 2 [Saccharomonospora azurea SZMC
14600]
gi|359739213|gb|EHK88085.1| peptide chain release factor 2 [Saccharomonospora azurea SZMC
14600]
Length = 368
Score = 42.4 bits (98), Expect = 0.041, Method: Composition-based stats.
Identities = 19/36 (52%), Positives = 26/36 (72%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+I EKDI+ R SGPGGQ+V T++ V +TH+PT
Sbjct: 231 EIPEKDIRVDVYRSSGPGGQSVNTTDSAVRITHLPT 266
>gi|303229877|ref|ZP_07316653.1| peptide chain release factor 2 [Veillonella atypica
ACS-134-V-Col7a]
gi|303232076|ref|ZP_07318779.1| peptide chain release factor 2 [Veillonella atypica ACS-049-V-Sch6]
gi|401679864|ref|ZP_10811788.1| peptide chain release factor 2 [Veillonella sp. ACP1]
gi|302513182|gb|EFL55221.1| peptide chain release factor 2 [Veillonella atypica ACS-049-V-Sch6]
gi|302515433|gb|EFL57399.1| peptide chain release factor 2 [Veillonella atypica
ACS-134-V-Col7a]
gi|400218991|gb|EJO49862.1| peptide chain release factor 2 [Veillonella sp. ACP1]
Length = 330
Score = 42.4 bits (98), Expect = 0.041, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S A+ ++D + ID KD+Q R SG GGQ + KT++ V +TH PT
Sbjct: 172 RRHTSFAAVDVMP-EIDDTVEINIDMKDVQVDTYRASGAGGQHINKTDSAVRMTHKPT 228
>gi|397662732|ref|YP_006504270.1| Peptide chain release factor [Legionella pneumophila subsp.
pneumophila]
gi|395126143|emb|CCD04323.1| Peptide chain release factor [Legionella pneumophila subsp.
pneumophila]
Length = 136
Score = 42.4 bits (98), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 24/35 (68%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
I E D+ E+F+ GSG GGQ + KT + V L H+PT
Sbjct: 19 IYETDLSEKFILGSGKGGQKLHKTASTVYLKHLPT 53
>gi|381164618|ref|ZP_09873848.1| peptide chain release factor 2 [Saccharomonospora azurea NA-128]
gi|379256523|gb|EHY90449.1| peptide chain release factor 2 [Saccharomonospora azurea NA-128]
Length = 368
Score = 42.4 bits (98), Expect = 0.041, Method: Composition-based stats.
Identities = 19/36 (52%), Positives = 26/36 (72%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+I EKDI+ R SGPGGQ+V T++ V +TH+PT
Sbjct: 231 EIPEKDIRVDVYRSSGPGGQSVNTTDSAVRITHLPT 266
>gi|284048024|ref|YP_003398363.1| peptide chain release factor 2 [Acidaminococcus fermentans DSM
20731]
gi|283952245|gb|ADB47048.1| peptide chain release factor 2 [Acidaminococcus fermentans DSM
20731]
Length = 366
Score = 42.4 bits (98), Expect = 0.041, Method: Composition-based stats.
Identities = 23/58 (39%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S A+ +LD + ++ D++ + R SG GGQ V KT++ V +THIPT
Sbjct: 211 RRHTSFAAVDVMP-ELDETVEVNLNMDDVRVDYYRASGAGGQHVNKTSSAVRMTHIPT 267
>gi|410088017|ref|ZP_11284716.1| Peptide chain release factor 2 [Morganella morganii SC01]
gi|455740159|ref|YP_007506425.1| Peptide chain release factor 2 [Morganella morganii subsp. morganii
KT]
gi|409765540|gb|EKN49647.1| Peptide chain release factor 2 [Morganella morganii SC01]
gi|455421722|gb|AGG32052.1| Peptide chain release factor 2 [Morganella morganii subsp. morganii
KT]
Length = 299
Score = 42.0 bits (97), Expect = 0.041, Method: Composition-based stats.
Identities = 27/58 (46%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S SS F ++D +I+ DI+ R SG GGQ V KT + V LTHIPT
Sbjct: 146 RRHTSF-SSAFIYPEVDDDIDIEINPADIRIDVYRASGAGGQHVNKTESAVRLTHIPT 202
>gi|374587364|ref|ZP_09660456.1| bacterial peptide chain release factor 1 (bRF-1) [Leptonema illini
DSM 21528]
gi|373876225|gb|EHQ08219.1| bacterial peptide chain release factor 1 (bRF-1) [Leptonema illini
DSM 21528]
Length = 364
Score = 42.0 bits (97), Expect = 0.041, Method: Composition-based stats.
Identities = 20/36 (55%), Positives = 25/36 (69%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
++DEKD++ R SG GGQ V KT + V LTHIPT
Sbjct: 218 ELDEKDLRVDVYRASGAGGQHVNKTESAVRLTHIPT 253
>gi|359772386|ref|ZP_09275815.1| peptide chain release factor 2 [Gordonia effusa NBRC 100432]
gi|359310486|dbj|GAB18593.1| peptide chain release factor 2 [Gordonia effusa NBRC 100432]
Length = 371
Score = 42.0 bits (97), Expect = 0.041, Method: Composition-based stats.
Identities = 19/35 (54%), Positives = 25/35 (71%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
I+E D++ R SGPGGQ+V T++ V LTHIPT
Sbjct: 235 INENDLRVDVYRSSGPGGQSVNTTDSAVRLTHIPT 269
>gi|260663162|ref|ZP_05864054.1| peptide chain release factor 2 [Lactobacillus fermentum 28-3-CHN]
gi|260552354|gb|EEX25405.1| peptide chain release factor 2 [Lactobacillus fermentum 28-3-CHN]
Length = 332
Score = 42.0 bits (97), Expect = 0.042, Method: Composition-based stats.
Identities = 26/61 (42%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Query: 2 SIFRRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIP 61
S RRH S AS LD S +ID D++ R SG GGQ + KT + V +TH+P
Sbjct: 169 SAARRHTSFASVDVMPI-LDESIEVEIDPSDLRVDTFRASGAGGQHINKTESAVRITHLP 227
Query: 62 T 62
T
Sbjct: 228 T 228
>gi|160931692|ref|ZP_02079086.1| hypothetical protein CLOLEP_00523 [Clostridium leptum DSM 753]
gi|156869337|gb|EDO62709.1| peptide chain release factor 2 [Clostridium leptum DSM 753]
Length = 374
Score = 42.0 bits (97), Expect = 0.042, Method: Composition-based stats.
Identities = 26/58 (44%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S AS L +++ +I +DI+ R SG GGQ V KT++ V LTHIPT
Sbjct: 212 RRHTSFAS-LEVMPEINEDVEVEIAPEDIKMDVYRASGAGGQKVNKTSSAVRLTHIPT 268
>gi|54296203|ref|YP_122572.1| hypothetical protein lpp0229 [Legionella pneumophila str. Paris]
gi|397665850|ref|YP_006507387.1| Peptide chain release factor [Legionella pneumophila subsp.
pneumophila]
gi|53749988|emb|CAH11376.1| hypothetical protein lpp0229 [Legionella pneumophila str. Paris]
gi|395129261|emb|CCD07491.1| Peptide chain release factor [Legionella pneumophila subsp.
pneumophila]
Length = 136
Score = 42.0 bits (97), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 24/35 (68%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
I E D+ E+F+ GSG GGQ + KT + V L H+PT
Sbjct: 19 IYETDLSEKFILGSGKGGQKLHKTASTVYLKHLPT 53
>gi|421895161|ref|ZP_16325636.1| peptide chain release factor 2 [Pediococcus pentosaceus IE-3]
gi|385271930|emb|CCG91008.1| peptide chain release factor 2 [Pediococcus pentosaceus IE-3]
Length = 332
Score = 42.0 bits (97), Expect = 0.042, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S AS +LD S I++ D++ R SG GGQ + KT++ V +TH+PT
Sbjct: 172 RRHTSFASVDVMP-ELDDSVEVNINQDDLRVDVYRSSGAGGQHINKTSSAVRITHLPT 228
>gi|291538249|emb|CBL11360.1| bacterial peptide chain release factor 1 (bRF-1) [Roseburia
intestinalis XB6B4]
Length = 358
Score = 42.0 bits (97), Expect = 0.042, Method: Composition-based stats.
Identities = 20/36 (55%), Positives = 25/36 (69%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+ID+KDI+ R SG GGQ V T++ V LTHIPT
Sbjct: 214 QIDDKDIRIDVCRASGAGGQCVNTTDSAVRLTHIPT 249
>gi|288923233|ref|ZP_06417373.1| peptide chain release factor 2 [Frankia sp. EUN1f]
gi|288345407|gb|EFC79796.1| peptide chain release factor 2 [Frankia sp. EUN1f]
Length = 366
Score = 42.0 bits (97), Expect = 0.042, Method: Composition-based stats.
Identities = 18/35 (51%), Positives = 25/35 (71%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
IDEK+++ R SGPGGQ V T++ V +TH+PT
Sbjct: 228 IDEKELRIDIFRSSGPGGQGVNTTDSAVRITHLPT 262
>gi|240147055|ref|ZP_04745656.1| peptide chain release factor 1 [Roseburia intestinalis L1-82]
gi|257200778|gb|EEU99062.1| peptide chain release factor 1 [Roseburia intestinalis L1-82]
gi|291535754|emb|CBL08866.1| bacterial peptide chain release factor 1 (bRF-1) [Roseburia
intestinalis M50/1]
Length = 357
Score = 42.0 bits (97), Expect = 0.042, Method: Composition-based stats.
Identities = 20/36 (55%), Positives = 25/36 (69%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+ID+KDI+ R SG GGQ V T++ V LTHIPT
Sbjct: 214 QIDDKDIRIDVCRASGAGGQCVNTTDSAVRLTHIPT 249
>gi|374853598|dbj|BAL56502.1| peptide chain release factor RF-2 [uncultured alpha
proteobacterium]
Length = 336
Score = 42.0 bits (97), Expect = 0.043, Method: Composition-based stats.
Identities = 25/58 (43%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S AS +D +ID KD++ R SG GGQ V +T++ V +THIPT
Sbjct: 156 RRHTSFASVWVWPV-VDEDVEIEIDPKDLRIDTYRASGAGGQHVNRTDSAVRITHIPT 212
>gi|227877191|ref|ZP_03995265.1| peptide chain release factor RF2 [Lactobacillus crispatus JV-V01]
gi|256848945|ref|ZP_05554379.1| peptide chain release factor 2 [Lactobacillus crispatus MV-1A-US]
gi|262045712|ref|ZP_06018676.1| peptide chain release factor 2 [Lactobacillus crispatus MV-3A-US]
gi|293380190|ref|ZP_06626272.1| peptide chain release factor 2 [Lactobacillus crispatus 214-1]
gi|295692545|ref|YP_003601155.1| peptide chain release factor 2 [Lactobacillus crispatus ST1]
gi|423317948|ref|ZP_17295845.1| peptide chain release factor 2 [Lactobacillus crispatus FB049-03]
gi|423321288|ref|ZP_17299160.1| peptide chain release factor 2 [Lactobacillus crispatus FB077-07]
gi|227863245|gb|EEJ70690.1| peptide chain release factor RF2 [Lactobacillus crispatus JV-V01]
gi|256714484|gb|EEU29471.1| peptide chain release factor 2 [Lactobacillus crispatus MV-1A-US]
gi|260573671|gb|EEX30227.1| peptide chain release factor 2 [Lactobacillus crispatus MV-3A-US]
gi|290923234|gb|EFE00155.1| peptide chain release factor 2 [Lactobacillus crispatus 214-1]
gi|295030651|emb|CBL50130.1| Peptide chain release factor 2 [Lactobacillus crispatus ST1]
gi|405596284|gb|EKB69629.1| peptide chain release factor 2 [Lactobacillus crispatus FB077-07]
gi|405597327|gb|EKB70600.1| peptide chain release factor 2 [Lactobacillus crispatus FB049-03]
Length = 332
Score = 42.0 bits (97), Expect = 0.043, Method: Composition-based stats.
Identities = 25/58 (43%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S AS ++D S ID KD++ R SG GGQ + KT++ V +TH+PT
Sbjct: 172 RRHTSFASVEVIP-EVDDSIQIDIDPKDLRVDVYRSSGAGGQHINKTSSAVRITHLPT 228
>gi|148555445|ref|YP_001263027.1| peptide chain release factor 1 [Sphingomonas wittichii RW1]
gi|166223608|sp|A5V9C3.1|RF1_SPHWW RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|148500635|gb|ABQ68889.1| bacterial peptide chain release factor 1 (bRF-1) [Sphingomonas
wittichii RW1]
Length = 360
Score = 42.0 bits (97), Expect = 0.043, Method: Composition-based stats.
Identities = 18/35 (51%), Positives = 26/35 (74%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
ID+KD++ R SGPGGQ+V T++ V +TH+PT
Sbjct: 218 IDDKDLRIDVYRSSGPGGQSVNTTDSAVRITHLPT 252
>gi|116492233|ref|YP_803968.1| peptide chain release factor 2 [Pediococcus pentosaceus ATCC 25745]
gi|116102383|gb|ABJ67526.1| bacterial peptide chain release factor 2 (bRF-2) [Pediococcus
pentosaceus ATCC 25745]
Length = 343
Score = 42.0 bits (97), Expect = 0.043, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S AS +LD S I++ D++ R SG GGQ + KT++ V +TH+PT
Sbjct: 183 RRHTSFASVDVMP-ELDDSVEVNINQDDLRVDVYRSSGAGGQHINKTSSAVRITHLPT 239
>gi|23013715|ref|ZP_00053581.1| COG1186: Protein chain release factor B [Magnetospirillum
magnetotacticum MS-1]
Length = 139
Score = 42.0 bits (97), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 21/30 (70%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVL 57
IDEK+I+E FVR SGPGGQ V K V L
Sbjct: 10 IDEKEIEESFVRSSGPGGQNVNKVETAVQL 39
>gi|358447048|ref|ZP_09157584.1| peptide chain release factor 1 [Corynebacterium casei UCMA 3821]
gi|356607022|emb|CCE55939.1| peptide chain release factor 1 [Corynebacterium casei UCMA 3821]
Length = 358
Score = 42.0 bits (97), Expect = 0.043, Method: Composition-based stats.
Identities = 20/35 (57%), Positives = 24/35 (68%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
IDEKDI+ R SG GGQ V T++ V LTH+PT
Sbjct: 218 IDEKDIRVDVYRSSGKGGQGVNTTDSAVRLTHLPT 252
>gi|294791755|ref|ZP_06756903.1| peptide chain release factor 2 [Veillonella sp. 6_1_27]
gi|294793616|ref|ZP_06758753.1| peptide chain release factor 2 [Veillonella sp. 3_1_44]
gi|416999056|ref|ZP_11939725.1| peptide chain release factor 2 [Veillonella parvula
ACS-068-V-Sch12]
gi|294455186|gb|EFG23558.1| peptide chain release factor 2 [Veillonella sp. 3_1_44]
gi|294456985|gb|EFG25347.1| peptide chain release factor 2 [Veillonella sp. 6_1_27]
gi|333977209|gb|EGL78068.1| peptide chain release factor 2 [Veillonella parvula
ACS-068-V-Sch12]
Length = 330
Score = 42.0 bits (97), Expect = 0.043, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S A+ ++D + ID KD+Q R SG GGQ + KT++ V +TH PT
Sbjct: 172 RRHTSFAAVDVMP-EIDDTVEINIDMKDVQVDTYRASGAGGQHINKTDSAVRMTHKPT 228
>gi|282848898|ref|ZP_06258288.1| peptide chain release factor 2 [Veillonella parvula ATCC 17745]
gi|282581403|gb|EFB86796.1| peptide chain release factor 2 [Veillonella parvula ATCC 17745]
Length = 330
Score = 42.0 bits (97), Expect = 0.043, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S A+ ++D + ID KD+Q R SG GGQ + KT++ V +TH PT
Sbjct: 172 RRHTSFAAVDVMP-EIDDTVEINIDMKDVQVDTYRASGAGGQHINKTDSAVRMTHKPT 228
>gi|269797862|ref|YP_003311762.1| peptide chain release factor 2 [Veillonella parvula DSM 2008]
gi|269094491|gb|ACZ24482.1| bacterial peptide chain release factor 2 (bRF- 2) [Veillonella
parvula DSM 2008]
Length = 368
Score = 42.0 bits (97), Expect = 0.043, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S A+ ++D + ID KD+Q R SG GGQ + KT++ V +TH PT
Sbjct: 210 RRHTSFAAVDVMP-EIDDTVEINIDMKDVQVDTYRASGAGGQHINKTDSAVRMTHKPT 266
>gi|392944575|ref|ZP_10310217.1| peptide chain release factor 2 [Frankia sp. QA3]
gi|392287869|gb|EIV93893.1| peptide chain release factor 2 [Frankia sp. QA3]
Length = 366
Score = 42.0 bits (97), Expect = 0.044, Method: Composition-based stats.
Identities = 18/35 (51%), Positives = 25/35 (71%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
ID+KD++ R SGPGGQ V T++ V +TH+PT
Sbjct: 228 IDDKDLRIDIFRSSGPGGQGVNTTDSAVRITHLPT 262
>gi|384564721|ref|ZP_10011825.1| peptide chain release factor 2 [Saccharomonospora glauca K62]
gi|384520575|gb|EIE97770.1| peptide chain release factor 2 [Saccharomonospora glauca K62]
Length = 368
Score = 42.0 bits (97), Expect = 0.044, Method: Composition-based stats.
Identities = 19/36 (52%), Positives = 26/36 (72%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+I EKDI+ R SGPGGQ+V T++ V +TH+PT
Sbjct: 231 EIPEKDIRVDVYRSSGPGGQSVNTTDSAVRITHLPT 266
>gi|316934390|ref|YP_004109372.1| peptide chain release factor 2 [Rhodopseudomonas palustris DX-1]
gi|315602104|gb|ADU44639.1| peptide chain release factor 2 [Rhodopseudomonas palustris DX-1]
Length = 376
Score = 42.0 bits (97), Expect = 0.044, Method: Composition-based stats.
Identities = 27/59 (45%), Positives = 34/59 (57%), Gaps = 3/59 (5%)
Query: 5 RRHLSLAS-SLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S +S +F D D K+ I E D++ +R G GGQ V KT + V LTHIPT
Sbjct: 210 RRHTSFSSVQIFPVID-DSIKI-DIKESDVRTDTMRSGGAGGQHVNKTESAVRLTHIPT 266
>gi|86739504|ref|YP_479904.1| peptide chain release factor 2 [Frankia sp. CcI3]
gi|123751448|sp|Q2JEW7.1|RF2_FRASC RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|86566366|gb|ABD10175.1| bacterial peptide chain release factor 2 (bRF-2) [Frankia sp. CcI3]
Length = 366
Score = 42.0 bits (97), Expect = 0.044, Method: Composition-based stats.
Identities = 18/35 (51%), Positives = 25/35 (71%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
ID+KD++ R SGPGGQ V T++ V +TH+PT
Sbjct: 228 IDDKDLRIDIFRSSGPGGQGVNTTDSAVRITHLPT 262
>gi|403252111|ref|ZP_10918424.1| protein chain release factor B [actinobacterium SCGC AAA027-L06]
gi|402914638|gb|EJX35648.1| protein chain release factor B [actinobacterium SCGC AAA027-L06]
Length = 368
Score = 42.0 bits (97), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S A ++ S +I+EKD++ R SGPGGQ V T++ V +TH+P+
Sbjct: 212 RRHTSFAGVEVVPV-VEQSDHIEIEEKDLRVDVYRSSGPGGQGVNTTDSAVRITHLPS 268
>gi|327398507|ref|YP_004339376.1| peptide chain release factor 2 [Hippea maritima DSM 10411]
gi|327181136|gb|AEA33317.1| peptide chain release factor 2 [Hippea maritima DSM 10411]
Length = 359
Score = 42.0 bits (97), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S AS D +++ ID KD++ R SG GGQ V KT++ + +THIPT
Sbjct: 204 RRHTSFASVSVLPEINDDTEID-IDPKDLKIDTFRASGAGGQHVNKTDSAIRITHIPT 260
>gi|304414309|ref|ZP_07395677.1| peptide chain release factor 2 [Candidatus Regiella insecticola
LSR1]
gi|304283523|gb|EFL91919.1| peptide chain release factor 2 [Candidatus Regiella insecticola
LSR1]
Length = 344
Score = 42.0 bits (97), Expect = 0.044, Method: Composition-based stats.
Identities = 25/59 (42%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTD 63
RRH S SS F ++D +I+ D++ R SG GGQ V KT + V +THIPT+
Sbjct: 191 RRHTSF-SSAFVYPEIDDKVNIEINPADLRIDVYRASGAGGQHVNKTESAVRITHIPTN 248
>gi|50086456|ref|YP_047966.1| peptide chain release factor 2 [Acinetobacter sp. ADP1]
gi|49532432|emb|CAG70144.1| peptide chain release factor 2 [Acinetobacter sp. ADP1]
Length = 337
Score = 42.0 bits (97), Expect = 0.045, Method: Composition-based stats.
Identities = 23/58 (39%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S S++F ++D + +I+ D++ R SG GGQ + KT++ V LTH PT
Sbjct: 184 RRHTSF-SAVFVSPEIDDNIEIEINPADVRTDTYRASGAGGQHINKTDSAVRLTHAPT 240
>gi|336420906|ref|ZP_08601067.1| peptide chain release factor 1 [Lachnospiraceae bacterium
5_1_57FAA]
gi|336003925|gb|EGN34001.1| peptide chain release factor 1 [Lachnospiraceae bacterium
5_1_57FAA]
Length = 356
Score = 42.0 bits (97), Expect = 0.045, Method: Composition-based stats.
Identities = 20/36 (55%), Positives = 25/36 (69%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+IDEKDI+ +R SG GGQ V T++ V LTH PT
Sbjct: 214 QIDEKDIRIDVMRASGNGGQCVNTTDSAVRLTHYPT 249
>gi|313893701|ref|ZP_07827268.1| peptide chain release factor 2 [Veillonella sp. oral taxon 158 str.
F0412]
gi|313441715|gb|EFR60140.1| peptide chain release factor 2 [Veillonella sp. oral taxon 158 str.
F0412]
Length = 330
Score = 42.0 bits (97), Expect = 0.045, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S A+ ++D + ID KD+Q R SG GGQ + KT++ V +TH PT
Sbjct: 172 RRHTSFAAVDVMP-EIDDTVEINIDMKDVQVDTYRASGAGGQHINKTDSAVRMTHKPT 228
>gi|406039111|ref|ZP_11046466.1| peptide chain release factor 2 [Acinetobacter ursingii DSM 16037 =
CIP 107286]
Length = 310
Score = 42.0 bits (97), Expect = 0.045, Method: Composition-based stats.
Identities = 23/58 (39%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S S++F ++D + +I+ D++ R SG GGQ + KT++ V LTH PT
Sbjct: 157 RRHTSF-SAVFVSPEIDDNIEIEINPSDVRTDTYRASGAGGQHINKTDSAVRLTHAPT 213
>gi|357022173|ref|ZP_09084402.1| peptide chain release factor 2 [Mycobacterium thermoresistibile
ATCC 19527]
gi|356478095|gb|EHI11234.1| peptide chain release factor 2 [Mycobacterium thermoresistibile
ATCC 19527]
Length = 375
Score = 42.0 bits (97), Expect = 0.045, Method: Composition-based stats.
Identities = 19/35 (54%), Positives = 24/35 (68%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
I E D++ R SGPGGQ+V T++ V LTHIPT
Sbjct: 234 IPESDVRVDVYRSSGPGGQSVNTTDSAVRLTHIPT 268
>gi|417809962|ref|ZP_12456643.1| peptide chain release factor 2 [Lactobacillus salivarius GJ-24]
gi|335350886|gb|EGM52382.1| peptide chain release factor 2 [Lactobacillus salivarius GJ-24]
Length = 355
Score = 42.0 bits (97), Expect = 0.045, Method: Composition-based stats.
Identities = 25/58 (43%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S AS +LD S ++ +DI+ R SG GGQ + KT++ V L HIPT
Sbjct: 195 RRHTSFASVNVMP-ELDDSVEVELRPEDIKMEVFRASGAGGQHINKTSSAVRLIHIPT 251
>gi|262277608|ref|ZP_06055401.1| peptide chain release factor 1 [alpha proteobacterium HIMB114]
gi|262224711|gb|EEY75170.1| peptide chain release factor 1 [alpha proteobacterium HIMB114]
Length = 355
Score = 42.0 bits (97), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 26/36 (72%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
KIDE +++ R SGPGGQ+V T++ V +THIP+
Sbjct: 215 KIDENELRIDVFRSSGPGGQSVNTTDSAVRITHIPS 250
>gi|408531516|emb|CCK29690.1| Peptide chain release factor 2 [Streptomyces davawensis JCM 4913]
Length = 352
Score = 42.0 bits (97), Expect = 0.045, Method: Composition-based stats.
Identities = 19/35 (54%), Positives = 24/35 (68%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
IDE +++ R SGPGGQ V T++ V LTHIPT
Sbjct: 217 IDESELRVDVYRSSGPGGQGVNTTDSAVRLTHIPT 251
>gi|347538825|ref|YP_004846249.1| peptide chain release factor 2 [Pseudogulbenkiania sp. NH8B]
gi|345642002|dbj|BAK75835.1| peptide chain release factor 2 [Pseudogulbenkiania sp. NH8B]
Length = 355
Score = 42.0 bits (97), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S SS+F ++D S V +I+ D++ R SG GGQ + KT++ V +TH PT
Sbjct: 202 RRHTSF-SSVFVYPEVDDSFVIEINPADLRVDTYRASGAGGQHINKTDSAVRITHNPT 258
>gi|374989282|ref|YP_004964777.1| peptide chain release factor 2 [Streptomyces bingchenggensis BCW-1]
gi|297159934|gb|ADI09646.1| peptide chain release factor 2 [Streptomyces bingchenggensis BCW-1]
Length = 383
Score = 42.0 bits (97), Expect = 0.045, Method: Composition-based stats.
Identities = 19/36 (52%), Positives = 25/36 (69%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+IDE +++ R SGPGGQ V T++ V LTHIPT
Sbjct: 245 EIDESELRIDVYRSSGPGGQGVNTTDSAVRLTHIPT 280
>gi|260771797|ref|ZP_05880715.1| peptide chain release factor 2 [Vibrio metschnikovii CIP 69.14]
gi|260613089|gb|EEX38290.1| peptide chain release factor 2 [Vibrio metschnikovii CIP 69.14]
Length = 320
Score = 42.0 bits (97), Expect = 0.045, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTDS 64
RRH S AS+ F ++D + I+ D++ R SG GGQ V T + V +TH+PT++
Sbjct: 167 RRHTSFASA-FVYPEIDENIAVDINPADLRIDVYRASGAGGQHVNTTESAVRITHVPTNT 225
>gi|167759398|ref|ZP_02431525.1| hypothetical protein CLOSCI_01745 [Clostridium scindens ATCC 35704]
gi|167662955|gb|EDS07085.1| peptide chain release factor 1 [Clostridium scindens ATCC 35704]
Length = 356
Score = 42.0 bits (97), Expect = 0.045, Method: Composition-based stats.
Identities = 20/36 (55%), Positives = 25/36 (69%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+IDEKDI+ +R SG GGQ V T++ V LTH PT
Sbjct: 214 QIDEKDIRIDVMRASGNGGQCVNTTDSAVRLTHYPT 249
>gi|218885659|ref|YP_002434980.1| peptide chain release factor 2 [Desulfovibrio vulgaris str.
'Miyazaki F']
gi|65736690|dbj|BAD98502.1| peptide release factor 2 [Desulfovibrio vulgaris]
gi|218756613|gb|ACL07512.1| Peptide chain release factor 2 [Desulfovibrio vulgaris str.
'Miyazaki F']
Length = 376
Score = 42.0 bits (97), Expect = 0.045, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S AS D+ I E D++ R SGPGGQ+V T++ V +TH+PT
Sbjct: 217 RRHTSFASVDVIP-DVGQEITVDIKETDLRIDIFRSSGPGGQSVNTTSSAVRITHLPT 273
>gi|406945537|gb|EKD76997.1| hypothetical protein ACD_42C00506G0002 [uncultured bacterium]
Length = 350
Score = 42.0 bits (97), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTDS 64
RRH S AS +F +++ +I+ D++ R SG GGQ V KT++ + +THIPT++
Sbjct: 198 RRHTSFAS-VFISPEINDDIQIEINMADVRVDTFRASGAGGQHVNKTDSAIRMTHIPTNT 256
>gi|395239462|ref|ZP_10417341.1| Peptide chain release factor RF2 [Lactobacillus gigeriorum CRBIP
24.85]
gi|394476369|emb|CCI87318.1| Peptide chain release factor RF2 [Lactobacillus gigeriorum CRBIP
24.85]
Length = 332
Score = 42.0 bits (97), Expect = 0.046, Method: Composition-based stats.
Identities = 25/58 (43%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S AS ++D S ID KD++ R SG GGQ + KT++ V +TH+PT
Sbjct: 172 RRHTSFASVEVIP-EVDDSIKIDIDPKDLRIDVYRSSGAGGQHINKTSSAVRITHLPT 228
>gi|262199727|ref|YP_003270936.1| peptide chain release factor 1 [Haliangium ochraceum DSM 14365]
gi|262083074|gb|ACY19043.1| peptide chain release factor 1 [Haliangium ochraceum DSM 14365]
Length = 363
Score = 42.0 bits (97), Expect = 0.046, Method: Composition-based stats.
Identities = 18/36 (50%), Positives = 27/36 (75%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
K++EKD++ R SGPGGQ+V T++ V +TH+PT
Sbjct: 220 KLEEKDLRIDVYRSSGPGGQSVNTTDSAVRVTHLPT 255
>gi|418021321|ref|ZP_12660430.1| peptide chain release factor 2 [Candidatus Regiella insecticola
R5.15]
gi|347603329|gb|EGY28185.1| peptide chain release factor 2 [Candidatus Regiella insecticola
R5.15]
Length = 299
Score = 42.0 bits (97), Expect = 0.046, Method: Composition-based stats.
Identities = 25/59 (42%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTD 63
RRH S SS F ++D +I+ D++ R SG GGQ V KT + V +THIPT+
Sbjct: 146 RRHTSF-SSAFVYPEIDDKVNIEINPADLRIDVYRASGAGGQHVNKTESAVRITHIPTN 203
>gi|422845304|ref|ZP_16892014.1| peptide chain release factor RF2 [Lactobacillus delbrueckii subsp.
lactis DSM 20072]
gi|325684476|gb|EGD26640.1| peptide chain release factor RF2 [Lactobacillus delbrueckii subsp.
lactis DSM 20072]
Length = 332
Score = 42.0 bits (97), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S AS ++D S ID KD++ R SG GGQ + KT++ V +THIPT
Sbjct: 172 RRHTSFASVEVIP-EVDDSIEIDIDPKDLRIDVYRSSGAGGQHINKTSSAVRITHIPT 228
>gi|300813058|ref|ZP_07093436.1| peptide chain release factor 2 [Lactobacillus delbrueckii subsp.
bulgaricus PB2003/044-T3-4]
gi|313123317|ref|YP_004033576.1| bacterial peptide chain release factor 2 (brf-2) [Lactobacillus
delbrueckii subsp. bulgaricus ND02]
gi|300495899|gb|EFK31043.1| peptide chain release factor 2 [Lactobacillus delbrueckii subsp.
bulgaricus PB2003/044-T3-4]
gi|312279880|gb|ADQ60599.1| Bacterial peptide chain release factor 2 (BRF-2) [Lactobacillus
delbrueckii subsp. bulgaricus ND02]
Length = 332
Score = 42.0 bits (97), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S AS ++D S ID KD++ R SG GGQ + KT++ V +THIPT
Sbjct: 172 RRHTSFASVEVIP-EVDDSIEIDIDPKDLRIDVYRSSGAGGQHINKTSSAVRITHIPT 228
>gi|385811987|ref|YP_005848378.1| peptide chain release factor RF2 [Lactobacillus fermentum CECT
5716]
gi|299782886|gb|ADJ40884.1| Peptide chain release factor RF2 [Lactobacillus fermentum CECT
5716]
Length = 332
Score = 42.0 bits (97), Expect = 0.046, Method: Composition-based stats.
Identities = 26/61 (42%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Query: 2 SIFRRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIP 61
S RRH S AS LD S +ID D++ R SG GGQ + KT + V +TH+P
Sbjct: 169 SAARRHTSFASVDVMPI-LDESIEVEIDPSDLRVDTFRASGAGGQHINKTESAVRITHLP 227
Query: 62 T 62
T
Sbjct: 228 T 228
>gi|197105302|ref|YP_002130679.1| peptide chain release factor 2 [Phenylobacterium zucineum HLK1]
gi|238690157|sp|B4RCR3.1|RF2_PHEZH RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|196478722|gb|ACG78250.1| peptide chain release factor 2 [Phenylobacterium zucineum HLK1]
Length = 369
Score = 42.0 bits (97), Expect = 0.046, Method: Composition-based stats.
Identities = 25/58 (43%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S AS D ++ +I+ D++ R SG GGQ V KT++ V LTHIPT
Sbjct: 207 RRHTSFASVWVYPVIDDNIEI-EINPADVRTDTYRASGAGGQHVNKTDSAVRLTHIPT 263
>gi|148358384|ref|YP_001249591.1| peptide chain release factor [Legionella pneumophila str. Corby]
gi|296105734|ref|YP_003617434.1| peptide chain release factor [Legionella pneumophila 2300/99
Alcoy]
gi|148280157|gb|ABQ54245.1| peptide chain release factor [Legionella pneumophila str. Corby]
gi|295647635|gb|ADG23482.1| peptide chain release factor [Legionella pneumophila 2300/99
Alcoy]
Length = 136
Score = 42.0 bits (97), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 24/35 (68%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
I E D+ E+F+ GSG GGQ + KT + V L H+PT
Sbjct: 19 IYETDLSEKFILGSGKGGQKLHKTASTVYLKHLPT 53
>gi|12642654|gb|AAK00335.1|AF320250_8 RF2 [Lactobacillus delbrueckii]
Length = 371
Score = 42.0 bits (97), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S AS ++D S ID KD++ R SG GGQ + KT++ V +THIPT
Sbjct: 211 RRHTSFASVEVIP-EVDDSIEIDIDPKDLRIDVYRSSGAGGQHINKTSSAVRITHIPT 267
>gi|104773716|ref|YP_618696.1| peptide chain release factor 2 [Lactobacillus delbrueckii subsp.
bulgaricus ATCC 11842]
gi|116513713|ref|YP_812619.1| protein chain release factor B [Lactobacillus delbrueckii subsp.
bulgaricus ATCC BAA-365]
gi|385815329|ref|YP_005851720.1| peptide chain release factor 2 [Lactobacillus delbrueckii subsp.
bulgaricus 2038]
gi|418029072|ref|ZP_12667620.1| hypothetical protein LDBUL1632_00414 [Lactobacillus delbrueckii
subsp. bulgaricus CNCM I-1632]
gi|418035446|ref|ZP_12673903.1| hypothetical protein LDBUL1519_00603 [Lactobacillus delbrueckii
subsp. bulgaricus CNCM I-1519]
gi|103422797|emb|CAI97438.1| Peptide chain release factor 2 (RF-2) [Lactobacillus delbrueckii
subsp. bulgaricus ATCC 11842]
gi|116093028|gb|ABJ58181.1| bacterial peptide chain release factor 2 (bRF-2) [Lactobacillus
delbrueckii subsp. bulgaricus ATCC BAA-365]
gi|325125366|gb|ADY84696.1| peptide chain release factor 2 [Lactobacillus delbrueckii subsp.
bulgaricus 2038]
gi|354690435|gb|EHE90383.1| hypothetical protein LDBUL1519_00603 [Lactobacillus delbrueckii
subsp. bulgaricus CNCM I-1519]
gi|354690790|gb|EHE90732.1| hypothetical protein LDBUL1632_00414 [Lactobacillus delbrueckii
subsp. bulgaricus CNCM I-1632]
Length = 332
Score = 42.0 bits (97), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S AS ++D S ID KD++ R SG GGQ + KT++ V +THIPT
Sbjct: 172 RRHTSFASVEVIP-EVDDSIEIDIDPKDLRIDVYRSSGAGGQHINKTSSAVRITHIPT 228
>gi|432343023|ref|ZP_19592235.1| peptide chain release factor 2 [Rhodococcus wratislaviensis IFP
2016]
gi|430771944|gb|ELB87760.1| peptide chain release factor 2 [Rhodococcus wratislaviensis IFP
2016]
Length = 368
Score = 42.0 bits (97), Expect = 0.046, Method: Composition-based stats.
Identities = 18/35 (51%), Positives = 25/35 (71%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
++E D++ R SGPGGQ+V T++ V LTHIPT
Sbjct: 231 VNENDVRVDVYRSSGPGGQSVNTTDSAVRLTHIPT 265
>gi|384101336|ref|ZP_10002375.1| peptide chain release factor 2 [Rhodococcus imtechensis RKJ300]
gi|419964746|ref|ZP_14480699.1| peptide chain release factor 2 [Rhodococcus opacus M213]
gi|383840890|gb|EID80185.1| peptide chain release factor 2 [Rhodococcus imtechensis RKJ300]
gi|414569858|gb|EKT80598.1| peptide chain release factor 2 [Rhodococcus opacus M213]
Length = 368
Score = 42.0 bits (97), Expect = 0.046, Method: Composition-based stats.
Identities = 18/35 (51%), Positives = 25/35 (71%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
++E D++ R SGPGGQ+V T++ V LTHIPT
Sbjct: 231 VNENDVRVDVYRSSGPGGQSVNTTDSAVRLTHIPT 265
>gi|372268591|ref|ZP_09504639.1| peptide chain release factor 2 [Alteromonas sp. S89]
Length = 248
Score = 42.0 bits (97), Expect = 0.046, Method: Composition-based stats.
Identities = 23/58 (39%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S +S+F ++D + ++D+ ++E R SG GGQ V KT++ V LTHI +
Sbjct: 95 RRHTSF-TSVFVSPEIDDNIEIEVDKSQVREDTYRASGAGGQHVNKTDSAVRLTHIES 151
>gi|424851867|ref|ZP_18276264.1| peptide chain release factor 2 [Rhodococcus opacus PD630]
gi|356666532|gb|EHI46603.1| peptide chain release factor 2 [Rhodococcus opacus PD630]
Length = 371
Score = 42.0 bits (97), Expect = 0.046, Method: Composition-based stats.
Identities = 18/35 (51%), Positives = 25/35 (71%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
++E D++ R SGPGGQ+V T++ V LTHIPT
Sbjct: 234 VNENDVRVDVYRSSGPGGQSVNTTDSAVRLTHIPT 268
>gi|340618771|ref|YP_004737224.1| peptide chain release factor 1 [Zobellia galactanivorans]
gi|339733568|emb|CAZ96945.1| Peptide chain release factor 1 [Zobellia galactanivorans]
Length = 358
Score = 42.0 bits (97), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 33/58 (56%), Gaps = 2/58 (3%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
R H S A+ + D+ +ID KD++ F SGPGGQ+V T + V LTHIPT
Sbjct: 194 RVHTSAATVMVLPEAEDFD--VQIDPKDVRIDFFCSSGPGGQSVNTTYSAVRLTHIPT 249
>gi|299133776|ref|ZP_07026970.1| peptide chain release factor 2 [Afipia sp. 1NLS2]
gi|298591612|gb|EFI51813.1| peptide chain release factor 2 [Afipia sp. 1NLS2]
Length = 322
Score = 42.0 bits (97), Expect = 0.046, Method: Composition-based stats.
Identities = 26/59 (44%), Positives = 35/59 (59%), Gaps = 3/59 (5%)
Query: 5 RRHLSLAS-SLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S +S ++F +D S I+E D++ +R G GGQ V KT + V LTHIPT
Sbjct: 156 RRHTSFSSIAIFPV--VDNSIKIDINESDVRVDTMRSGGAGGQHVNKTESAVRLTHIPT 212
>gi|227893185|ref|ZP_04010990.1| peptide chain release factor RF2 [Lactobacillus ultunensis DSM
16047]
gi|227865051|gb|EEJ72472.1| peptide chain release factor RF2 [Lactobacillus ultunensis DSM
16047]
Length = 332
Score = 42.0 bits (97), Expect = 0.046, Method: Composition-based stats.
Identities = 25/58 (43%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S AS ++D S ID KD++ R SG GGQ + KT++ V +TH+PT
Sbjct: 172 RRHTSFASVEVIP-EVDDSIKIDIDPKDLRIDVYRSSGAGGQHINKTSSAVRITHLPT 228
>gi|111023366|ref|YP_706338.1| peptide chain release factor 2 [Rhodococcus jostii RHA1]
gi|397736801|ref|ZP_10503479.1| peptide chain release factor 2 [Rhodococcus sp. JVH1]
gi|123339715|sp|Q0S2Q6.1|RF2_RHOSR RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|110822896|gb|ABG98180.1| peptide chain release factor RF2 [Rhodococcus jostii RHA1]
gi|396927382|gb|EJI94613.1| peptide chain release factor 2 [Rhodococcus sp. JVH1]
Length = 368
Score = 42.0 bits (97), Expect = 0.046, Method: Composition-based stats.
Identities = 18/35 (51%), Positives = 25/35 (71%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
++E D++ R SGPGGQ+V T++ V LTHIPT
Sbjct: 231 VNENDVRVDVYRSSGPGGQSVNTTDSAVRLTHIPT 265
>gi|224824516|ref|ZP_03697623.1| peptide chain release factor 2 [Pseudogulbenkiania ferrooxidans
2002]
gi|224603009|gb|EEG09185.1| peptide chain release factor 2 [Pseudogulbenkiania ferrooxidans
2002]
Length = 349
Score = 42.0 bits (97), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S SS+F ++D S V +I+ D++ R SG GGQ + KT++ V +TH PT
Sbjct: 196 RRHTSF-SSVFVYPEVDDSFVIEINPADLRVDTYRASGAGGQHINKTDSAVRITHNPT 252
>gi|311107121|ref|YP_003979974.1| peptide chain release factor [Achromobacter xylosoxidans A8]
gi|310761810|gb|ADP17259.1| peptide chain release factor 2 [Achromobacter xylosoxidans A8]
Length = 300
Score = 42.0 bits (97), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 6 RHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RH S AS +F ++D S +++ D++ R SG GGQ + KT++ V LTHIPT
Sbjct: 148 RHTSFAS-VFVYPEVDESFEVEVNPADLRVDTYRASGAGGQHINKTDSAVRLTHIPT 203
>gi|256848105|ref|ZP_05553549.1| peptide chain release factor 2 [Lactobacillus coleohominis
101-4-CHN]
gi|256715165|gb|EEU30142.1| peptide chain release factor 2 [Lactobacillus coleohominis
101-4-CHN]
Length = 332
Score = 42.0 bits (97), Expect = 0.047, Method: Composition-based stats.
Identities = 25/58 (43%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S AS +LD S ID D++ R SG GGQ + KT + V +TH+PT
Sbjct: 172 RRHTSFASVDVMP-ELDESVEVDIDPSDLRVDTFRSSGAGGQHINKTESAVRITHLPT 228
>gi|90962160|ref|YP_536076.1| peptide chain release factor 2 [Lactobacillus salivarius UCC118]
gi|301301257|ref|ZP_07207412.1| peptide chain release factor 2 [Lactobacillus salivarius
ACS-116-V-Col5a]
gi|90821354|gb|ABD99993.1| Bacterial Peptide Chain Release Factor 2 [Lactobacillus salivarius
UCC118]
gi|300851133|gb|EFK78862.1| peptide chain release factor 2 [Lactobacillus salivarius
ACS-116-V-Col5a]
Length = 355
Score = 42.0 bits (97), Expect = 0.048, Method: Composition-based stats.
Identities = 25/58 (43%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S AS +LD S ++ +DI+ R SG GGQ + KT++ V L HIPT
Sbjct: 195 RRHTSFASVNVMP-ELDDSVEVELRPEDIKMEVFRASGAGGQHINKTSSAVRLIHIPT 251
>gi|384084121|ref|ZP_09995296.1| peptide chain release factor 2 [Acidithiobacillus thiooxidans ATCC
19377]
Length = 293
Score = 42.0 bits (97), Expect = 0.048, Method: Composition-based stats.
Identities = 23/58 (39%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S AS +F ++D S +I+ D++ R SG GGQ V KT++ + +TH+P+
Sbjct: 140 RRHTSFAS-VFIYPEIDDSFEIEINPADLKVDTYRASGAGGQHVNKTDSAIRITHVPS 196
>gi|347731253|ref|ZP_08864352.1| peptide chain release factor 2 [Desulfovibrio sp. A2]
gi|347519960|gb|EGY27106.1| peptide chain release factor 2 [Desulfovibrio sp. A2]
Length = 373
Score = 42.0 bits (97), Expect = 0.048, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S AS D+ I E D++ R SGPGGQ+V T++ V +TH+PT
Sbjct: 214 RRHTSFASVDVIP-DVGQEITVDIKEADLRIDIFRSSGPGGQSVNTTSSAVRITHLPT 270
>gi|385840722|ref|YP_005864046.1| Bacterial Peptide Chain Release Factor 2 [Lactobacillus salivarius
CECT 5713]
gi|300214843|gb|ADJ79259.1| Bacterial Peptide Chain Release Factor 2 [Lactobacillus salivarius
CECT 5713]
Length = 355
Score = 42.0 bits (97), Expect = 0.048, Method: Composition-based stats.
Identities = 25/58 (43%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S AS +LD S ++ +DI+ R SG GGQ + KT++ V L HIPT
Sbjct: 195 RRHTSFASVNVMP-ELDDSVEVELRPEDIKMEVFRASGAGGQHINKTSSAVRLIHIPT 251
>gi|293606108|ref|ZP_06688473.1| peptide chain release factor RF2 [Achromobacter piechaudii ATCC
43553]
gi|292815563|gb|EFF74679.1| peptide chain release factor RF2 [Achromobacter piechaudii ATCC
43553]
Length = 300
Score = 42.0 bits (97), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 6 RHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RH S AS +F ++D S +++ D++ R SG GGQ + KT++ V LTHIPT
Sbjct: 148 RHTSFAS-VFVYPEVDESFEVEVNPADLRVDTYRASGAGGQHINKTDSAVRLTHIPT 203
>gi|238019424|ref|ZP_04599850.1| hypothetical protein VEIDISOL_01293 [Veillonella dispar ATCC 17748]
gi|237864123|gb|EEP65413.1| hypothetical protein VEIDISOL_01293 [Veillonella dispar ATCC 17748]
Length = 330
Score = 42.0 bits (97), Expect = 0.048, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S A+ ++D + ID KD+Q R SG GGQ + KT++ V +TH PT
Sbjct: 172 RRHTSFAAVDVMP-EIDDTVEINIDMKDVQVDTYRASGAGGQHINKTDSAVRMTHRPT 228
>gi|227891182|ref|ZP_04008987.1| peptide chain release factor 2 [Lactobacillus salivarius ATCC
11741]
gi|227867056|gb|EEJ74477.1| peptide chain release factor 2 [Lactobacillus salivarius ATCC
11741]
Length = 355
Score = 42.0 bits (97), Expect = 0.048, Method: Composition-based stats.
Identities = 25/58 (43%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S AS +LD S ++ +DI+ R SG GGQ + KT++ V L HIPT
Sbjct: 195 RRHTSFASVNVMP-ELDDSVEVELRPEDIKMEVFRASGAGGQHINKTSSAVRLIHIPT 251
>gi|226365870|ref|YP_002783653.1| peptide chain release factor 2 [Rhodococcus opacus B4]
gi|254790919|sp|C1B1L3.1|RF2_RHOOB RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|226244360|dbj|BAH54708.1| peptide chain release factor 2 [Rhodococcus opacus B4]
Length = 368
Score = 42.0 bits (97), Expect = 0.048, Method: Composition-based stats.
Identities = 18/35 (51%), Positives = 25/35 (71%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
++E D++ R SGPGGQ+V T++ V LTHIPT
Sbjct: 231 VNENDVRVDVYRSSGPGGQSVNTTDSAVRLTHIPT 265
>gi|406705909|ref|YP_006756262.1| peptide chain release factor 2 (bRF-2) [alpha proteobacterium
HIMB5]
gi|406651685|gb|AFS47085.1| bacterial peptide chain release factor 2 (bRF-2) [alpha
proteobacterium HIMB5]
Length = 327
Score = 42.0 bits (97), Expect = 0.048, Method: Composition-based stats.
Identities = 26/58 (44%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S AS + KV +I EKD++ R SG GGQ V T++ V +THIPT
Sbjct: 172 RRHTSFASVWIYPMVDENIKV-EIQEKDLRIDTYRSSGAGGQHVNTTDSAVRITHIPT 228
>gi|334563502|ref|ZP_08516493.1| peptide chain release factor 2 [Corynebacterium bovis DSM 20582]
Length = 373
Score = 42.0 bits (97), Expect = 0.048, Method: Composition-based stats.
Identities = 18/35 (51%), Positives = 25/35 (71%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
IDE +++ R SGPGGQ+V T++ V LTH+PT
Sbjct: 235 IDENEVRVDVYRSSGPGGQSVNTTDSAVRLTHVPT 269
>gi|239988119|ref|ZP_04708783.1| peptide chain release factor 2 [Streptomyces roseosporus NRRL
11379]
Length = 352
Score = 42.0 bits (97), Expect = 0.048, Method: Composition-based stats.
Identities = 18/36 (50%), Positives = 25/36 (69%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+IDE +++ R SGPGGQ V T++ V LTH+PT
Sbjct: 216 EIDESELRVDVYRSSGPGGQGVNTTDSAVRLTHLPT 251
>gi|297588165|ref|ZP_06946809.1| peptide chain release factor RF2 [Finegoldia magna ATCC 53516]
gi|297574854|gb|EFH93574.1| peptide chain release factor RF2 [Finegoldia magna ATCC 53516]
Length = 329
Score = 42.0 bits (97), Expect = 0.048, Method: Composition-based stats.
Identities = 26/59 (44%), Positives = 36/59 (61%), Gaps = 3/59 (5%)
Query: 5 RRHLSLAS-SLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S AS +F ++ S +ID+KD++ R SG GGQ V T++ V +THIPT
Sbjct: 176 RRHTSFASVDVFP--EIKDSHNIQIDDKDLKVDTYRASGAGGQHVNMTDSAVRITHIPT 232
>gi|443627028|ref|ZP_21111430.1| putative Peptide chain release factor 2 [Streptomyces
viridochromogenes Tue57]
gi|443339445|gb|ELS53685.1| putative Peptide chain release factor 2 [Streptomyces
viridochromogenes Tue57]
Length = 368
Score = 42.0 bits (97), Expect = 0.049, Method: Composition-based stats.
Identities = 18/36 (50%), Positives = 25/36 (69%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+IDE D++ R SGPGGQ V T++ V +TH+PT
Sbjct: 232 EIDESDLRIDVYRSSGPGGQGVNTTDSAVRITHLPT 267
>gi|297183483|gb|ADI19614.1| protein chain release factor a [uncultured SAR11 cluster bacterium
HF0770_37D02]
Length = 358
Score = 42.0 bits (97), Expect = 0.049, Method: Composition-based stats.
Identities = 18/36 (50%), Positives = 27/36 (75%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
KI+EKD++ R SGPGGQ+V T++ V +TH+P+
Sbjct: 215 KINEKDLRIDVFRSSGPGGQSVNTTDSAVRITHLPS 250
>gi|254455525|ref|ZP_05068954.1| peptide chain release factor 1 [Candidatus Pelagibacter sp.
HTCC7211]
gi|207082527|gb|EDZ59953.1| peptide chain release factor 1 [Candidatus Pelagibacter sp.
HTCC7211]
Length = 357
Score = 42.0 bits (97), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 25/36 (69%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
KI+E D++ R GPGGQ+V T++ V +THIPT
Sbjct: 215 KINEADLRIDVFRAGGPGGQSVNTTDSAVRITHIPT 250
>gi|15606882|ref|NP_214263.1| peptide chain release factor 2 [Aquifex aeolicus VF5]
gi|6225943|sp|O67695.1|RF2_AQUAE RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|2984119|gb|AAC07656.1| peptide chain release factor RF-2 [Aquifex aeolicus VF5]
Length = 373
Score = 42.0 bits (97), Expect = 0.049, Method: Composition-based stats.
Identities = 26/66 (39%), Positives = 34/66 (51%), Gaps = 17/66 (25%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDE--------KDIQERFVRGSGPGGQAVAKTNNCVV 56
RRH S A+ S +P+IDE +D++ R SG GGQ V KT+ V
Sbjct: 210 RRHTSFAA---------VSVMPQIDEDIKIEIKPEDLKIETFRASGAGGQYVNKTDTAVR 260
Query: 57 LTHIPT 62
+THIPT
Sbjct: 261 ITHIPT 266
>gi|414162831|ref|ZP_11419078.1| peptide chain release factor 2 [Afipia felis ATCC 53690]
gi|410880611|gb|EKS28451.1| peptide chain release factor 2 [Afipia felis ATCC 53690]
Length = 322
Score = 42.0 bits (97), Expect = 0.049, Method: Composition-based stats.
Identities = 26/59 (44%), Positives = 35/59 (59%), Gaps = 3/59 (5%)
Query: 5 RRHLSLAS-SLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S +S ++F +D S I+E D++ +R G GGQ V KT + V LTHIPT
Sbjct: 156 RRHTSFSSIAIFPV--VDNSIKIDINESDVRVDTMRSGGAGGQHVNKTESAVRLTHIPT 212
>gi|338737792|ref|YP_004674754.1| Class I peptide chain release factor domain [Hyphomicrobium sp.
MC1]
gi|337758355|emb|CCB64180.1| Class I peptide chain release factor domain [Hyphomicrobium sp.
MC1]
Length = 139
Score = 42.0 bits (97), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 22/30 (73%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVL 57
IDE +++ERFVR SGPGGQ V K + V L
Sbjct: 9 IDEAELEERFVRASGPGGQNVNKVSTAVEL 38
>gi|417788605|ref|ZP_12436288.1| peptide chain release factor 2 [Lactobacillus salivarius NIAS840]
gi|334308782|gb|EGL99768.1| peptide chain release factor 2 [Lactobacillus salivarius NIAS840]
Length = 355
Score = 42.0 bits (97), Expect = 0.049, Method: Composition-based stats.
Identities = 25/58 (43%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S AS +LD S ++ +DI+ R SG GGQ + KT++ V L HIPT
Sbjct: 195 RRHTSFASVNVMP-ELDDSVEVELRPEDIKMEVFRASGAGGQHINKTSSAVRLIHIPT 251
>gi|330919897|ref|XP_003298803.1| hypothetical protein PTT_09620 [Pyrenophora teres f. teres 0-1]
gi|311327840|gb|EFQ93110.1| hypothetical protein PTT_09620 [Pyrenophora teres f. teres 0-1]
Length = 416
Score = 42.0 bits (97), Expect = 0.049, Method: Composition-based stats.
Identities = 19/37 (51%), Positives = 26/37 (70%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTDS 64
ID K+++ +R SG GGQ V KT + V LTHIPT++
Sbjct: 265 IDPKEVKLEVMRASGAGGQHVNKTESAVRLTHIPTNT 301
>gi|408419576|ref|YP_006760990.1| class I peptide chain release factor [Desulfobacula toluolica
Tol2]
gi|405106789|emb|CCK80286.1| class I peptide chain release factor [Desulfobacula toluolica
Tol2]
Length = 118
Score = 42.0 bits (97), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 26/36 (72%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTD 63
I ++DI+E+F++ SG GGQ V K+N+ V L H T+
Sbjct: 20 IQKEDIEEKFIKSSGRGGQKVNKSNSAVFLKHKKTN 55
>gi|393223039|gb|EJD08523.1| release factor [Fomitiporia mediterranea MF3/22]
Length = 404
Score = 42.0 bits (97), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 23/34 (67%)
Query: 29 DEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
D+KDI+ +R G GGQ V KT + V LTHIPT
Sbjct: 261 DQKDIKIEVMRARGAGGQHVNKTESAVRLTHIPT 294
>gi|347527834|ref|YP_004834581.1| putative peptide chain release factor [Sphingobium sp. SYK-6]
gi|345136515|dbj|BAK66124.1| putative peptide chain release factor [Sphingobium sp. SYK-6]
Length = 205
Score = 42.0 bits (97), Expect = 0.050, Method: Composition-based stats.
Identities = 19/47 (40%), Positives = 32/47 (68%), Gaps = 1/47 (2%)
Query: 16 RKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
R + +D ++ P + ++DI+ + R SGPGGQ V KT++ V TH+P+
Sbjct: 94 RPFRID-AQSPDLRDEDIRYQTFRASGPGGQHVNKTDSAVRATHLPS 139
>gi|313884513|ref|ZP_07818274.1| peptide chain release factor 2 [Eremococcus coleocola
ACS-139-V-Col8]
gi|312620297|gb|EFR31725.1| peptide chain release factor 2 [Eremococcus coleocola
ACS-139-V-Col8]
Length = 341
Score = 42.0 bits (97), Expect = 0.050, Method: Composition-based stats.
Identities = 25/58 (43%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S AS + ++D S +I+ DI+ R SG GGQ + KT++ V +THIPT
Sbjct: 183 RRHTSFAS-IEVTPEMDDSIEIEINPDDIRVDTYRASGAGGQHINKTSSAVRITHIPT 239
>gi|242309101|ref|ZP_04808256.1| peptide chain release factor 2 [Helicobacter pullorum MIT 98-5489]
gi|239524525|gb|EEQ64391.1| peptide chain release factor 2 [Helicobacter pullorum MIT 98-5489]
Length = 364
Score = 42.0 bits (97), Expect = 0.050, Method: Composition-based stats.
Identities = 23/58 (39%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+RH S AS ++D + +I+EKD++ R SG GGQ + KT + + +THIPT
Sbjct: 209 KRHTSFASVQVTP-EIDDNIEIEIEEKDLRIDTYRASGAGGQHINKTESAIRITHIPT 265
>gi|305664895|ref|YP_003861182.1| peptide chain release factor 1 [Maribacter sp. HTCC2170]
gi|88707725|gb|EAQ99965.1| peptide chain release factor 1 [Maribacter sp. HTCC2170]
Length = 358
Score = 42.0 bits (97), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 33/58 (56%), Gaps = 2/58 (3%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
R H S A+ + D+ +ID KD++ F SGPGGQ+V T + V LTHIPT
Sbjct: 194 RVHTSAATVMVLPEAEDFD--VQIDPKDVRIDFFCSSGPGGQSVNTTYSAVRLTHIPT 249
>gi|254479978|ref|ZP_05093226.1| peptide chain release factor 2 [marine gamma proteobacterium
HTCC2148]
gi|214039540|gb|EEB80199.1| peptide chain release factor 2 [marine gamma proteobacterium
HTCC2148]
Length = 310
Score = 42.0 bits (97), Expect = 0.050, Method: Composition-based stats.
Identities = 25/58 (43%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S SS+F ++D + +I+ D++ R SG GGQ V KT++ V LTH PT
Sbjct: 157 RRHTSF-SSVFVSPEIDDNIEIEINPADLRVDTYRASGAGGQHVNKTDSAVRLTHNPT 213
>gi|407009068|gb|EKE24289.1| hypothetical protein ACD_6C00170G0001 [uncultured bacterium]
Length = 349
Score = 42.0 bits (97), Expect = 0.050, Method: Composition-based stats.
Identities = 23/58 (39%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S S++F ++D + +I+ D++ R SG GGQ + KT++ V LTH PT
Sbjct: 196 RRHTSF-SAVFVSPEVDDNIEIEINPSDVRTDTYRASGAGGQHINKTDSAVRLTHAPT 252
>gi|75675907|ref|YP_318328.1| peptide chain release factor 2 [Nitrobacter winogradskyi Nb-255]
gi|74420777|gb|ABA04976.1| bacterial peptide chain release factor 2 (bRF-2) [Nitrobacter
winogradskyi Nb-255]
Length = 322
Score = 42.0 bits (97), Expect = 0.051, Method: Composition-based stats.
Identities = 26/59 (44%), Positives = 35/59 (59%), Gaps = 3/59 (5%)
Query: 5 RRHLSLAS-SLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S +S ++F D D K+ I E D++ +R G GGQ V KT + V LTH+PT
Sbjct: 156 RRHTSFSSVAIFPVVD-DSIKI-DIKESDVRTDTMRSGGAGGQHVNKTESAVRLTHVPT 212
>gi|406998514|gb|EKE16445.1| hypothetical protein ACD_11C00017G0035 [uncultured bacterium]
Length = 331
Score = 42.0 bits (97), Expect = 0.051, Method: Composition-based stats.
Identities = 19/38 (50%), Positives = 27/38 (71%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTDS 64
KI+EKD++ R SG GGQ+V T++ V +THIPT +
Sbjct: 196 KIEEKDLRVDVYRSSGAGGQSVNTTDSAVRVTHIPTGT 233
>gi|251771888|gb|EES52462.1| peptide chain release factor 2 [Leptospirillum ferrodiazotrophum]
Length = 294
Score = 42.0 bits (97), Expect = 0.051, Method: Composition-based stats.
Identities = 25/58 (43%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S AS +F +++ +I ++DI+ R S GGQ V KT++ V LTHIPT
Sbjct: 124 RRHTSFAS-VFVYPEIEGEVTVEIRDEDIRIDTFRASSAGGQHVNKTSSAVRLTHIPT 180
>gi|218666919|ref|YP_002424975.1| peptide chain release factor 2, programmed frameshift
[Acidithiobacillus ferrooxidans ATCC 23270]
gi|226739123|sp|B7J4M2.1|RF2_ACIF2 RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|218519132|gb|ACK79718.1| peptide chain release factor 2, programmed frameshift
[Acidithiobacillus ferrooxidans ATCC 23270]
Length = 365
Score = 42.0 bits (97), Expect = 0.051, Method: Composition-based stats.
Identities = 23/58 (39%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S AS +F ++D S I+ D++ R SG GGQ V KT++ + +TH+P+
Sbjct: 212 RRHTSFAS-VFVYPEIDDSFEVDINPADLKVDTYRASGAGGQHVNKTDSAIRITHVPS 268
>gi|83945459|ref|ZP_00957806.1| peptidyl-tRNA hydrolase [Oceanicaulis sp. HTCC2633]
gi|83851035|gb|EAP88893.1| peptidyl-tRNA hydrolase [Oceanicaulis alexandrii HTCC2633]
Length = 137
Score = 42.0 bits (97), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 20/30 (66%), Positives = 21/30 (70%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVL 57
IDE I ERFVR SGPGGQ V KT + V L
Sbjct: 9 IDESLITERFVRSSGPGGQHVNKTESAVQL 38
>gi|334129644|ref|ZP_08503448.1| Peptide chain release factor 2 [Methyloversatilis universalis FAM5]
gi|333445329|gb|EGK73271.1| Peptide chain release factor 2 [Methyloversatilis universalis FAM5]
Length = 320
Score = 42.0 bits (97), Expect = 0.052, Method: Composition-based stats.
Identities = 23/58 (39%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S SS+F ++D S I+ D++ R SG GGQ + KT++ + +TH+PT
Sbjct: 167 RRHTSF-SSVFVYPEVDDSIEVDINPADLRVDTFRASGAGGQHINKTDSAIRITHVPT 223
>gi|418961684|ref|ZP_13513569.1| peptide chain release factor 2 [Lactobacillus salivarius SMXD51]
gi|380343779|gb|EIA32127.1| peptide chain release factor 2 [Lactobacillus salivarius SMXD51]
Length = 333
Score = 42.0 bits (97), Expect = 0.052, Method: Composition-based stats.
Identities = 25/58 (43%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S AS +LD S ++ +DI+ R SG GGQ + KT++ V L HIPT
Sbjct: 173 RRHTSFASVNVMP-ELDDSVEVELRPEDIKMEVFRASGAGGQHINKTSSAVRLIHIPT 229
>gi|424057671|ref|ZP_17795188.1| peptide chain release factor 2 [Acinetobacter nosocomialis Ab22222]
gi|425743117|ref|ZP_18861210.1| peptide chain release factor 2 [Acinetobacter baumannii WC-487]
gi|445438568|ref|ZP_21441391.1| peptide chain release factor 2 [Acinetobacter baumannii OIFC021]
gi|407440187|gb|EKF46705.1| peptide chain release factor 2 [Acinetobacter nosocomialis Ab22222]
gi|425484581|gb|EKU50982.1| peptide chain release factor 2 [Acinetobacter baumannii WC-487]
gi|444752899|gb|ELW77569.1| peptide chain release factor 2 [Acinetobacter baumannii OIFC021]
Length = 310
Score = 42.0 bits (97), Expect = 0.053, Method: Composition-based stats.
Identities = 23/58 (39%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S S++F ++D + I+ D++ R SG GGQ + KT++ V LTHIP+
Sbjct: 157 RRHTSF-SAVFISPEVDDNIEIDINPSDVRTDTYRASGAGGQHINKTDSAVRLTHIPS 213
>gi|375093798|ref|ZP_09740063.1| peptide chain release factor 2 [Saccharomonospora marina XMU15]
gi|374654531|gb|EHR49364.1| peptide chain release factor 2 [Saccharomonospora marina XMU15]
Length = 384
Score = 42.0 bits (97), Expect = 0.053, Method: Composition-based stats.
Identities = 21/42 (50%), Positives = 28/42 (66%), Gaps = 3/42 (7%)
Query: 21 DYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
D+ VP EKDI+ R SGPGGQ+V T++ V +TH+PT
Sbjct: 244 DHVDVP---EKDIRVDVYRSSGPGGQSVNTTDSAVRITHLPT 282
>gi|350636142|gb|EHA24502.1| hypothetical protein ASPNIDRAFT_137541 [Aspergillus niger ATCC
1015]
Length = 139
Score = 42.0 bits (97), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 25/36 (69%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
KI + D+ +++G+GPGGQ + KTN+ V + H PT
Sbjct: 27 KIQDADVTVSYLKGTGPGGQKINKTNSAVQIIHKPT 62
>gi|297181318|gb|ADI17509.1| protein chain release factor b [uncultured bacterium HF0130_06E03]
Length = 325
Score = 42.0 bits (97), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S AS +F D+D + ++D++ R G GGQ V KT++ V +TH+PT
Sbjct: 172 RRHTSFAS-VFVYPDVDDDIEVDLKDEDLKIEVYRAGGAGGQHVNKTSSAVRITHVPT 228
>gi|262377202|ref|ZP_06070427.1| peptide chain release factor 2 [Acinetobacter lwoffii SH145]
gi|262307940|gb|EEY89078.1| peptide chain release factor 2 [Acinetobacter lwoffii SH145]
Length = 310
Score = 42.0 bits (97), Expect = 0.053, Method: Composition-based stats.
Identities = 23/58 (39%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S S++F ++D + +I+ D++ R SG GGQ + KT++ V LTH PT
Sbjct: 157 RRHTSF-SAVFVSPEVDDNIEIEINPSDVRTDTYRASGAGGQHINKTDSAVRLTHAPT 213
>gi|145250303|ref|XP_001396665.1| peptidyl-tRNA hydrolase domain protein [Aspergillus niger CBS
513.88]
gi|134082184|emb|CAL00939.1| unnamed protein product [Aspergillus niger]
Length = 198
Score = 42.0 bits (97), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 25/36 (69%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
KI + D+ +++G+GPGGQ + KTN+ V + H PT
Sbjct: 44 KIQDADVTVSYLKGTGPGGQKINKTNSAVQIIHKPT 79
>gi|297172547|gb|ADI23517.1| protein chain release factor B [uncultured Gemmatimonadales
bacterium HF0770_41L09]
Length = 331
Score = 42.0 bits (97), Expect = 0.054, Method: Composition-based stats.
Identities = 25/58 (43%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S AS D ++ IDE D++ R SG GGQ V KT++ V +TH PT
Sbjct: 172 RRHTSFASVFIYPLVEDGIEI-DIDESDLRIDTYRASGAGGQHVNKTDSAVRITHEPT 228
>gi|291445100|ref|ZP_06584490.1| peptide chain release factor 2 [Streptomyces roseosporus NRRL
15998]
gi|291348047|gb|EFE74951.1| peptide chain release factor 2 [Streptomyces roseosporus NRRL
15998]
Length = 368
Score = 42.0 bits (97), Expect = 0.054, Method: Composition-based stats.
Identities = 18/36 (50%), Positives = 25/36 (69%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+IDE +++ R SGPGGQ V T++ V LTH+PT
Sbjct: 232 EIDESELRVDVYRSSGPGGQGVNTTDSAVRLTHLPT 267
>gi|209885116|ref|YP_002288973.1| peptide chain release factor 2 [Oligotropha carboxidovorans OM5]
gi|337741256|ref|YP_004632984.1| peptide chain release factor 2 [Oligotropha carboxidovorans OM5]
gi|386030272|ref|YP_005951047.1| peptide chain release factor 2 [Oligotropha carboxidovorans OM4]
gi|209873312|gb|ACI93108.1| peptide chain release factor 2 [Oligotropha carboxidovorans OM5]
gi|336095340|gb|AEI03166.1| peptide chain release factor 2 [Oligotropha carboxidovorans OM4]
gi|336098920|gb|AEI06743.1| peptide chain release factor 2 [Oligotropha carboxidovorans OM5]
Length = 322
Score = 42.0 bits (97), Expect = 0.054, Method: Composition-based stats.
Identities = 26/59 (44%), Positives = 35/59 (59%), Gaps = 3/59 (5%)
Query: 5 RRHLSLAS-SLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S +S ++F +D S I+E D++ +R G GGQ V KT + V LTHIPT
Sbjct: 156 RRHTSFSSIAIFPV--VDNSIKIDINESDVRVDTMRSGGAGGQHVNKTESAVRLTHIPT 212
>gi|260550208|ref|ZP_05824421.1| peptide chain release factor 2 [Acinetobacter sp. RUH2624]
gi|260406736|gb|EEX00216.1| peptide chain release factor 2 [Acinetobacter sp. RUH2624]
Length = 310
Score = 41.6 bits (96), Expect = 0.054, Method: Composition-based stats.
Identities = 23/58 (39%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S S++F ++D + I+ D++ R SG GGQ + KT++ V LTHIP+
Sbjct: 157 RRHTSF-SAVFISPEVDDNIEIDINPSDVRTDTYRASGAGGQHINKTDSAVRLTHIPS 213
>gi|411005038|ref|ZP_11381367.1| peptide chain release factor 2 [Streptomyces globisporus C-1027]
Length = 368
Score = 41.6 bits (96), Expect = 0.054, Method: Composition-based stats.
Identities = 18/36 (50%), Positives = 25/36 (69%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+IDE +++ R SGPGGQ V T++ V LTH+PT
Sbjct: 232 EIDESELRVDVYRSSGPGGQGVNTTDSAVRLTHLPT 267
>gi|417778830|ref|ZP_12426630.1| peptide chain release factor 2 [Leptospira weilii str. 2006001853]
gi|410781090|gb|EKR65669.1| peptide chain release factor 2 [Leptospira weilii str. 2006001853]
Length = 367
Score = 41.6 bits (96), Expect = 0.054, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S S + ++D KI+EKDI+ R SG GGQ V T++ V +TH+P+
Sbjct: 214 RRHTSFVS-VHVSPEIDDEIDIKIEEKDIRVDVYRSSGAGGQHVNTTDSAVRITHLPS 270
>gi|418720338|ref|ZP_13279536.1| peptide chain release factor 2 [Leptospira borgpetersenii str. UI
09149]
gi|418735369|ref|ZP_13291780.1| peptide chain release factor 2 [Leptospira borgpetersenii serovar
Castellonis str. 200801910]
gi|421094064|ref|ZP_15554785.1| peptide chain release factor 2 [Leptospira borgpetersenii str.
200801926]
gi|410363205|gb|EKP14237.1| peptide chain release factor 2 [Leptospira borgpetersenii str.
200801926]
gi|410743316|gb|EKQ92059.1| peptide chain release factor 2 [Leptospira borgpetersenii str. UI
09149]
gi|410748990|gb|EKR01883.1| peptide chain release factor 2 [Leptospira borgpetersenii serovar
Castellonis str. 200801910]
gi|456890986|gb|EMG01739.1| peptide chain release factor 2 [Leptospira borgpetersenii str.
200701203]
Length = 367
Score = 41.6 bits (96), Expect = 0.054, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S S + ++D KI+EKDI+ R SG GGQ V T++ V +TH+P+
Sbjct: 214 RRHTSFVS-VHVSPEIDDEIDIKIEEKDIRVDVYRSSGAGGQHVNTTDSAVRITHLPS 270
>gi|345000024|ref|YP_004802878.1| peptide chain release factor 2 [Streptomyces sp. SirexAA-E]
gi|344315650|gb|AEN10338.1| peptide chain release factor 2 [Streptomyces sp. SirexAA-E]
Length = 352
Score = 41.6 bits (96), Expect = 0.054, Method: Composition-based stats.
Identities = 18/36 (50%), Positives = 25/36 (69%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+IDE +++ R SGPGGQ V T++ V LTH+PT
Sbjct: 216 EIDESELRVDVYRSSGPGGQGVNTTDSAVRLTHLPT 251
>gi|302534760|ref|ZP_07287102.1| peptide chain release factor 2 [Streptomyces sp. C]
gi|302443655|gb|EFL15471.1| peptide chain release factor 2 [Streptomyces sp. C]
Length = 369
Score = 41.6 bits (96), Expect = 0.054, Method: Composition-based stats.
Identities = 18/36 (50%), Positives = 25/36 (69%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+IDE +++ R SGPGGQ V T++ V +THIPT
Sbjct: 232 EIDESELRVDVYRASGPGGQGVNTTDSAVRITHIPT 267
>gi|153854177|ref|ZP_01995485.1| hypothetical protein DORLON_01476 [Dorea longicatena DSM 13814]
gi|149753226|gb|EDM63157.1| peptide chain release factor 1 [Dorea longicatena DSM 13814]
Length = 358
Score = 41.6 bits (96), Expect = 0.054, Method: Composition-based stats.
Identities = 20/36 (55%), Positives = 25/36 (69%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+IDEKDI+ +R SG GGQ V T++ V LTH PT
Sbjct: 214 QIDEKDIRIDVMRASGNGGQCVNTTDSAVRLTHYPT 249
>gi|116329128|ref|YP_798848.1| peptide chain release factor 2 [Leptospira borgpetersenii serovar
Hardjo-bovis str. L550]
gi|116330263|ref|YP_799981.1| peptide chain release factor 2 [Leptospira borgpetersenii serovar
Hardjo-bovis str. JB197]
gi|122281974|sp|Q04V47.1|RF2_LEPBJ RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|122283090|sp|Q04YD0.1|RF2_LEPBL RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|116121872|gb|ABJ79915.1| Peptide chain release factor 2 [Leptospira borgpetersenii serovar
Hardjo-bovis str. L550]
gi|116123952|gb|ABJ75223.1| Peptide chain release factor 2 [Leptospira borgpetersenii serovar
Hardjo-bovis str. JB197]
Length = 367
Score = 41.6 bits (96), Expect = 0.054, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S S + ++D KI+EKDI+ R SG GGQ V T++ V +TH+P+
Sbjct: 214 RRHTSFVS-VHVSPEIDDEIDIKIEEKDIRVDVYRSSGAGGQHVNTTDSAVRITHLPS 270
>gi|365861270|ref|ZP_09401044.1| peptide chain release factor 2 [Streptomyces sp. W007]
gi|364009264|gb|EHM30230.1| peptide chain release factor 2 [Streptomyces sp. W007]
Length = 368
Score = 41.6 bits (96), Expect = 0.055, Method: Composition-based stats.
Identities = 18/36 (50%), Positives = 25/36 (69%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+IDE +++ R SGPGGQ V T++ V LTH+PT
Sbjct: 232 EIDESELRVDVYRSSGPGGQGVNTTDSAVRLTHLPT 267
>gi|395204882|ref|ZP_10395822.1| peptide chain release factor 1 [Propionibacterium humerusii P08]
gi|328907544|gb|EGG27310.1| peptide chain release factor 1 [Propionibacterium humerusii P08]
Length = 361
Score = 41.6 bits (96), Expect = 0.055, Method: Composition-based stats.
Identities = 22/44 (50%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Query: 19 DLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
D+D ++V ID DI+ R SGPGGQ V T++ V LTH+PT
Sbjct: 208 DVDETEV-DIDPADIRVDVYRSSGPGGQGVNTTDSAVRLTHLPT 250
>gi|357413121|ref|YP_004924857.1| peptide chain release factor 2 [Streptomyces flavogriseus ATCC
33331]
gi|320010490|gb|ADW05340.1| peptide chain release factor 2 [Streptomyces flavogriseus ATCC
33331]
Length = 368
Score = 41.6 bits (96), Expect = 0.055, Method: Composition-based stats.
Identities = 18/36 (50%), Positives = 25/36 (69%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+IDE +++ R SGPGGQ V T++ V LTH+PT
Sbjct: 232 EIDESELRVDVYRSSGPGGQGVNTTDSAVRLTHLPT 267
>gi|182438348|ref|YP_001826067.1| peptide chain release factor 2 [Streptomyces griseus subsp. griseus
NBRC 13350]
gi|326778999|ref|ZP_08238264.1| Peptide chain release factor 2 [Streptomyces griseus XylebKG-1]
gi|238688991|sp|B1VV08.1|RF2_STRGG RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|178466864|dbj|BAG21384.1| putative peptide chain release factor 2 [Streptomyces griseus
subsp. griseus NBRC 13350]
gi|326659332|gb|EGE44178.1| Peptide chain release factor 2 [Streptomyces griseus XylebKG-1]
Length = 368
Score = 41.6 bits (96), Expect = 0.055, Method: Composition-based stats.
Identities = 18/36 (50%), Positives = 25/36 (69%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+IDE +++ R SGPGGQ V T++ V LTH+PT
Sbjct: 232 EIDESELRVDVYRSSGPGGQGVNTTDSAVRLTHLPT 267
>gi|88812905|ref|ZP_01128149.1| hypothetical protein NB231_00155 [Nitrococcus mobilis Nb-231]
gi|88789827|gb|EAR20950.1| hypothetical protein NB231_00155 [Nitrococcus mobilis Nb-231]
Length = 325
Score = 41.6 bits (96), Expect = 0.055, Method: Composition-based stats.
Identities = 23/58 (39%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S A+ +F +LD + +I+ D++ R SG GGQ V +T + V +TH+PT
Sbjct: 172 RRHTSFAA-VFVSPELDDAVEVEINPADLRIDVYRASGAGGQHVNRTESAVRITHMPT 228
>gi|410447401|ref|ZP_11301497.1| peptide chain release factor 2 [SAR86 cluster bacterium SAR86E]
gi|409979676|gb|EKO36434.1| peptide chain release factor 2 [SAR86 cluster bacterium SAR86E]
Length = 347
Score = 41.6 bits (96), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S AS +F ++D S + + D++ R SG GGQ V KT++ V LTH PT
Sbjct: 194 RRHTSFAS-VFISPEIDESIEVEFNPADVRIDTYRASGAGGQHVNKTDSAVRLTHGPT 250
>gi|50304901|ref|XP_452406.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49641539|emb|CAH01257.1| KLLA0C04642p [Kluyveromyces lactis]
Length = 168
Score = 41.6 bits (96), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 25/34 (73%), Gaps = 1/34 (2%)
Query: 30 EKDIQERFVRGS-GPGGQAVAKTNNCVVLTHIPT 62
E+DI+E+F+ G GPGGQ + K N+ V L H+PT
Sbjct: 45 ERDIEEKFLHGGRGPGGQKINKCNSKVQLRHVPT 78
>gi|377821217|ref|YP_004977588.1| peptide chain release factor 2 [Burkholderia sp. YI23]
gi|357936052|gb|AET89611.1| peptide chain release factor 2 [Burkholderia sp. YI23]
Length = 406
Score = 41.6 bits (96), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 6 RHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RH S SS+F ++D S +I+ DI+ R SG GGQ + KT++ V LTH PT
Sbjct: 254 RHTSF-SSVFVYPEIDDSIEIEINPADIRTDTYRASGAGGQHINKTDSAVRLTHAPT 309
>gi|257066737|ref|YP_003152993.1| peptide chain release factor 2 [Anaerococcus prevotii DSM 20548]
gi|256798617|gb|ACV29272.1| bacterial peptide chain release factor 2 (bRF- 2) [Anaerococcus
prevotii DSM 20548]
Length = 367
Score = 41.6 bits (96), Expect = 0.056, Method: Composition-based stats.
Identities = 27/59 (45%), Positives = 35/59 (59%), Gaps = 3/59 (5%)
Query: 5 RRHLSLAS-SLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S AS +F +LD + ID D++ R SG GGQ V KT++ V +THIPT
Sbjct: 214 RRHTSFASVDVFP--ELDENIELDIDPSDLRIDTYRASGAGGQHVNKTDSAVRITHIPT 270
>gi|373457567|ref|ZP_09549334.1| Peptide chain release factor 2 [Caldithrix abyssi DSM 13497]
gi|371719231|gb|EHO41002.1| Peptide chain release factor 2 [Caldithrix abyssi DSM 13497]
Length = 367
Score = 41.6 bits (96), Expect = 0.056, Method: Composition-based stats.
Identities = 23/58 (39%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S AS +F ++D + +I+ D++ R SG GGQ V KT++ + +TH+PT
Sbjct: 210 RRHTSFAS-VFVIPEIDENIDVEINPSDLRIDTYRASGAGGQHVNKTDSAIRITHLPT 266
>gi|421494497|ref|ZP_15941844.1| PRFB [Morganella morganii subsp. morganii KT]
gi|400191236|gb|EJO24385.1| PRFB [Morganella morganii subsp. morganii KT]
Length = 248
Score = 41.6 bits (96), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S SS F ++D +I+ DI+ R SG GGQ V KT + V LTHIPT
Sbjct: 95 RRHTSF-SSAFIYPEVDDDIDIEINPADIRIDVYRASGAGGQHVNKTESAVRLTHIPT 151
>gi|302037377|ref|YP_003797699.1| peptide chain release factor 2 [Candidatus Nitrospira defluvii]
gi|300605441|emb|CBK41774.1| Peptide chain release factor 2 (RF-2) [Candidatus Nitrospira
defluvii]
Length = 377
Score = 41.6 bits (96), Expect = 0.057, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S AS +F +L+ ID+KD++ R G GGQ V K + +THIPT
Sbjct: 207 RRHTSFAS-VFVYPELEDDVQVVIDDKDLRVDTFRAGGAGGQNVNKVETAIRITHIPT 263
>gi|116748170|ref|YP_844857.1| peptide chain release factor 2 [Syntrophobacter fumaroxidans MPOB]
gi|116697234|gb|ABK16422.1| bacterial peptide chain release factor 2 (bRF-2) [Syntrophobacter
fumaroxidans MPOB]
Length = 312
Score = 41.6 bits (96), Expect = 0.057, Method: Composition-based stats.
Identities = 25/66 (37%), Positives = 35/66 (53%), Gaps = 17/66 (25%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEK--------DIQERFVRGSGPGGQAVAKTNNCVV 56
RRH S A+ L +P++DEK D++ R SG GGQ V KT++ V
Sbjct: 148 RRHTSFAAVLV---------IPEVDEKIEVEIKQADLRIDTYRASGAGGQHVNKTSSAVR 198
Query: 57 LTHIPT 62
+TH+PT
Sbjct: 199 ITHLPT 204
>gi|417986507|ref|ZP_12627075.1| peptide chain release factor 1 [Lactobacillus casei 32G]
gi|410525562|gb|EKQ00462.1| peptide chain release factor 1 [Lactobacillus casei 32G]
Length = 359
Score = 41.6 bits (96), Expect = 0.057, Method: Composition-based stats.
Identities = 20/36 (55%), Positives = 25/36 (69%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
KID KDI+ R SG GGQ V KT++ V +THIP+
Sbjct: 217 KIDPKDIRTDVYRSSGAGGQHVNKTSSAVRMTHIPS 252
>gi|251792741|ref|YP_003007467.1| peptide chain release factor 1 [Aggregatibacter aphrophilus NJ8700]
gi|416892929|ref|ZP_11924253.1| peptide chain release factor 1 [Aggregatibacter aphrophilus ATCC
33389]
gi|422336286|ref|ZP_16417259.1| peptide chain release factor 1 [Aggregatibacter aphrophilus F0387]
gi|247534134|gb|ACS97380.1| peptide chain release factor 1 [Aggregatibacter aphrophilus NJ8700]
gi|347814627|gb|EGY31276.1| peptide chain release factor 1 [Aggregatibacter aphrophilus ATCC
33389]
gi|353346472|gb|EHB90757.1| peptide chain release factor 1 [Aggregatibacter aphrophilus F0387]
Length = 360
Score = 41.6 bits (96), Expect = 0.057, Method: Composition-based stats.
Identities = 19/44 (43%), Positives = 30/44 (68%)
Query: 19 DLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+L S++P+I+ D++ R SG GGQ + KT++ V +THIPT
Sbjct: 208 ELPESEMPEINPSDLRIDTYRASGAGGQHINKTDSAVRITHIPT 251
>gi|421100863|ref|ZP_15561482.1| peptide chain release factor 2 [Leptospira borgpetersenii str.
200901122]
gi|410796048|gb|EKR98188.1| peptide chain release factor 2 [Leptospira borgpetersenii str.
200901122]
Length = 367
Score = 41.6 bits (96), Expect = 0.058, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S S + ++D KI+EKDI+ R SG GGQ V T++ V +TH+P+
Sbjct: 214 RRHTSFVS-VHVSPEIDDEIDIKIEEKDIRVDVYRSSGAGGQHVNTTDSAVRITHLPS 270
>gi|373450066|ref|ZP_09542138.1| Peptide chain release factor 2 (RF-2) [Wolbachia pipientis wAlbB]
gi|371932728|emb|CCE77126.1| Peptide chain release factor 2 (RF-2) [Wolbachia pipientis wAlbB]
Length = 337
Score = 41.6 bits (96), Expect = 0.058, Method: Composition-based stats.
Identities = 25/58 (43%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+RH S AS D + +DEKD++ R SG GGQ V KT + V +THIPT
Sbjct: 184 KRHTSFASVGVTPVIEDSIDI-VVDEKDLKIDTYRASGAGGQHVNKTESAVRITHIPT 240
>gi|375137430|ref|YP_004998079.1| peptide chain release factor 2 [Mycobacterium rhodesiae NBB3]
gi|359818051|gb|AEV70864.1| peptide chain release factor 2 [Mycobacterium rhodesiae NBB3]
Length = 371
Score = 41.6 bits (96), Expect = 0.058, Method: Composition-based stats.
Identities = 19/36 (52%), Positives = 25/36 (69%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+I E D++ R SGPGGQ+V T++ V LTHIPT
Sbjct: 234 EIPESDVRVDVYRSSGPGGQSVNTTDSAVRLTHIPT 269
>gi|238020780|ref|ZP_04601206.1| hypothetical protein GCWU000324_00670 [Kingella oralis ATCC 51147]
gi|237867760|gb|EEP68766.1| hypothetical protein GCWU000324_00670 [Kingella oralis ATCC 51147]
Length = 367
Score = 41.6 bits (96), Expect = 0.058, Method: Composition-based stats.
Identities = 23/58 (39%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+RH S AS +F ++D S +I+ D++ R SG GGQ + KT++ V +TH+PT
Sbjct: 214 KRHTSFAS-VFVYPEVDDSFEIEINPADLRTDTYRASGAGGQHINKTDSAVRITHLPT 270
>gi|116494651|ref|YP_806385.1| peptide chain release factor 1 [Lactobacillus casei ATCC 334]
gi|191638150|ref|YP_001987316.1| peptide chain release factor 1 [Lactobacillus casei BL23]
gi|227535366|ref|ZP_03965415.1| peptide chain release factor RF1 [Lactobacillus paracasei subsp.
paracasei ATCC 25302]
gi|239631748|ref|ZP_04674779.1| peptide chain release factor 1 [Lactobacillus paracasei subsp.
paracasei 8700:2]
gi|301066209|ref|YP_003788232.1| protein chain release factor A [Lactobacillus casei str. Zhang]
gi|385819853|ref|YP_005856240.1| peptide chain release factor 1 (bRF-1) [Lactobacillus casei LC2W]
gi|385823050|ref|YP_005859392.1| peptide chain release factor 1 (bRF-1) [Lactobacillus casei BD-II]
gi|409997016|ref|YP_006751417.1| peptide chain release factor 1 [Lactobacillus casei W56]
gi|417980467|ref|ZP_12621147.1| peptide chain release factor 1 [Lactobacillus casei 12A]
gi|417983234|ref|ZP_12623873.1| peptide chain release factor 1 [Lactobacillus casei 21/1]
gi|417989400|ref|ZP_12629906.1| peptide chain release factor 1 [Lactobacillus casei A2-362]
gi|417992673|ref|ZP_12633026.1| peptide chain release factor 1 [Lactobacillus casei CRF28]
gi|417996010|ref|ZP_12636295.1| peptide chain release factor 1 [Lactobacillus casei M36]
gi|418001796|ref|ZP_12641927.1| peptide chain release factor 1 [Lactobacillus casei UCD174]
gi|418004869|ref|ZP_12644875.1| peptide chain release factor 1 [Lactobacillus casei UW1]
gi|418010581|ref|ZP_12650356.1| peptide chain release factor 1 [Lactobacillus casei Lc-10]
gi|418012422|ref|ZP_12652138.1| peptide chain release factor 1 [Lactobacillus casei Lpc-37]
gi|122263928|sp|Q03A29.1|RF1_LACC3 RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|238693030|sp|B3WDK7.1|RF1_LACCB RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|116104801|gb|ABJ69943.1| bacterial peptide chain release factor 1 (bRF-1) [Lactobacillus
casei ATCC 334]
gi|190712452|emb|CAQ66458.1| Peptide chain release factor 1 (RF-1) [Lactobacillus casei BL23]
gi|227186962|gb|EEI67029.1| peptide chain release factor RF1 [Lactobacillus paracasei subsp.
paracasei ATCC 25302]
gi|239526213|gb|EEQ65214.1| peptide chain release factor 1 [Lactobacillus paracasei subsp.
paracasei 8700:2]
gi|300438616|gb|ADK18382.1| Protein chain release factor A [Lactobacillus casei str. Zhang]
gi|327382180|gb|AEA53656.1| bacterial peptide chain release factor 1 (bRF-1) [Lactobacillus
casei LC2W]
gi|327385377|gb|AEA56851.1| bacterial peptide chain release factor 1 (bRF-1) [Lactobacillus
casei BD-II]
gi|406358028|emb|CCK22298.1| Peptide chain release factor 1 [Lactobacillus casei W56]
gi|410524790|gb|EKP99697.1| peptide chain release factor 1 [Lactobacillus casei 12A]
gi|410528654|gb|EKQ03502.1| peptide chain release factor 1 [Lactobacillus casei 21/1]
gi|410532874|gb|EKQ07569.1| peptide chain release factor 1 [Lactobacillus casei CRF28]
gi|410536163|gb|EKQ10763.1| peptide chain release factor 1 [Lactobacillus casei M36]
gi|410538489|gb|EKQ13042.1| peptide chain release factor 1 [Lactobacillus casei A2-362]
gi|410545609|gb|EKQ19899.1| peptide chain release factor 1 [Lactobacillus casei UCD174]
gi|410548440|gb|EKQ22641.1| peptide chain release factor 1 [Lactobacillus casei UW1]
gi|410553821|gb|EKQ27814.1| peptide chain release factor 1 [Lactobacillus casei Lc-10]
gi|410556839|gb|EKQ30698.1| peptide chain release factor 1 [Lactobacillus casei Lpc-37]
Length = 359
Score = 41.6 bits (96), Expect = 0.058, Method: Composition-based stats.
Identities = 20/36 (55%), Positives = 25/36 (69%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
KID KDI+ R SG GGQ V KT++ V +THIP+
Sbjct: 217 KIDPKDIRTDVYRSSGAGGQHVNKTSSAVRMTHIPS 252
>gi|374292279|ref|YP_005039314.1| putative Class I peptide chain release factor [Azospirillum
lipoferum 4B]
gi|357424218|emb|CBS87085.1| putative Class I peptide chain release factor [Azospirillum
lipoferum 4B]
Length = 139
Score = 41.6 bits (96), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 22/30 (73%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVL 57
+DE ++QE FVR SGPGGQ V KT + V L
Sbjct: 10 LDESELQEEFVRASGPGGQHVNKTESAVQL 39
>gi|353328587|ref|ZP_08970914.1| protein chain release factor B [Wolbachia endosymbiont wVitB of
Nasonia vitripennis]
Length = 337
Score = 41.6 bits (96), Expect = 0.058, Method: Composition-based stats.
Identities = 25/58 (43%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+RH S AS D + +DEKD++ R SG GGQ V KT + V +THIPT
Sbjct: 184 KRHTSFASVGVTPVIEDSIDI-VVDEKDLKIDTYRASGAGGQHVNKTESAVRITHIPT 240
>gi|310829208|ref|YP_003961565.1| peptide chain release factor 2 [Eubacterium limosum KIST612]
gi|308740942|gb|ADO38602.1| peptide chain release factor 2 [Eubacterium limosum KIST612]
Length = 310
Score = 41.6 bits (96), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S AS L ++D S +I+ DI+ R SG GGQ V KT++ + +THIPT
Sbjct: 153 RRHTSFAS-LDVTPEVDDSVEIEINPDDIRVDTYRASGAGGQHVNKTSSAIRITHIPT 209
>gi|227499885|ref|ZP_03929978.1| peptide chain release factor RF2 [Anaerococcus tetradius ATCC
35098]
gi|227217994|gb|EEI83267.1| peptide chain release factor RF2 [Anaerococcus tetradius ATCC
35098]
Length = 333
Score = 41.6 bits (96), Expect = 0.058, Method: Composition-based stats.
Identities = 27/59 (45%), Positives = 35/59 (59%), Gaps = 3/59 (5%)
Query: 5 RRHLSLAS-SLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S AS +F +LD + ID D++ R SG GGQ V KT++ V +THIPT
Sbjct: 178 RRHTSFASVDVFP--ELDDNLEIDIDPSDLRIDTYRASGAGGQHVNKTDSAVRITHIPT 234
>gi|431931671|ref|YP_007244717.1| protein chain release factor B [Thioflavicoccus mobilis 8321]
gi|431829974|gb|AGA91087.1| protein chain release factor B [Thioflavicoccus mobilis 8321]
Length = 139
Score = 41.6 bits (96), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 23/35 (65%), Gaps = 2/35 (5%)
Query: 25 VPKI--DEKDIQERFVRGSGPGGQAVAKTNNCVVL 57
PKI DE+D++ERFVR GPGGQ V K V L
Sbjct: 5 TPKIALDERDLEERFVRSPGPGGQNVNKVATAVQL 39
>gi|344199097|ref|YP_004783423.1| peptide chain release factor 2 [Acidithiobacillus ferrivorans SS3]
gi|343774541|gb|AEM47097.1| peptide chain release factor 2 [Acidithiobacillus ferrivorans SS3]
Length = 365
Score = 41.6 bits (96), Expect = 0.059, Method: Composition-based stats.
Identities = 23/58 (39%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S AS +F ++D S I+ D++ R SG GGQ V KT++ + +TH+P+
Sbjct: 212 RRHTSFAS-VFIYPEIDDSFEVDINPADLKVDTYRASGAGGQHVNKTDSAIRITHVPS 268
>gi|189425837|ref|YP_001953014.1| class I peptide chain release factor [Geobacter lovleyi SZ]
gi|189422096|gb|ACD96494.1| Class I peptide chain release factor [Geobacter lovleyi SZ]
Length = 124
Score = 41.6 bits (96), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 27/35 (77%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+ E++++E+FVR SG GGQ + KT++ V + H+PT
Sbjct: 25 VKEEELEEQFVRASGRGGQHLNKTSSAVQVRHLPT 59
>gi|388580888|gb|EIM21200.1| release factor [Wallemia sebi CBS 633.66]
Length = 306
Score = 41.6 bits (96), Expect = 0.059, Method: Composition-based stats.
Identities = 19/34 (55%), Positives = 23/34 (67%)
Query: 29 DEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
DEKD++ +R G GGQ V KT + V LTHIPT
Sbjct: 162 DEKDVRVEVMRARGAGGQHVNKTESAVRLTHIPT 195
>gi|227495018|ref|ZP_03925334.1| peptide chain release factor 1 [Actinomyces coleocanis DSM 15436]
gi|226831470|gb|EEH63853.1| peptide chain release factor 1 [Actinomyces coleocanis DSM 15436]
Length = 369
Score = 41.6 bits (96), Expect = 0.059, Method: Composition-based stats.
Identities = 18/35 (51%), Positives = 25/35 (71%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
ID+ D++ R SGPGGQ+V T++ V +THIPT
Sbjct: 224 IDQNDLRIDVFRSSGPGGQSVNTTDSAVRITHIPT 258
>gi|417998865|ref|ZP_12639079.1| peptide chain release factor 1 [Lactobacillus casei T71499]
gi|410540195|gb|EKQ14713.1| peptide chain release factor 1 [Lactobacillus casei T71499]
Length = 359
Score = 41.6 bits (96), Expect = 0.060, Method: Composition-based stats.
Identities = 20/36 (55%), Positives = 25/36 (69%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
KID KDI+ R SG GGQ V KT++ V +THIP+
Sbjct: 217 KIDPKDIRTDVYRSSGAGGQHVNKTSSAVRMTHIPS 252
>gi|406989550|gb|EKE09321.1| hypothetical protein ACD_16C00192G0003 [uncultured bacterium]
Length = 337
Score = 41.6 bits (96), Expect = 0.060, Method: Composition-based stats.
Identities = 23/58 (39%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S AS D + +I++KD++ R SG GGQ V KT++ + +TH+PT
Sbjct: 180 RRHTSFASVWVYPEVEDTIDI-QIEDKDLRIDTYRASGAGGQHVNKTDSAIRITHLPT 236
>gi|295836903|ref|ZP_06823836.1| peptide chain release factor 2 [Streptomyces sp. SPB74]
gi|295826265|gb|EFG64762.1| peptide chain release factor 2 [Streptomyces sp. SPB74]
Length = 371
Score = 41.6 bits (96), Expect = 0.060, Method: Composition-based stats.
Identities = 18/36 (50%), Positives = 25/36 (69%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+IDE +++ R SGPGGQ V T++ V LTH+PT
Sbjct: 232 EIDESELRVDVYRSSGPGGQGVNTTDSAVRLTHLPT 267
>gi|87120696|ref|ZP_01076589.1| peptide chain release factor 2, programmed frameshift [Marinomonas
sp. MED121]
gi|86163924|gb|EAQ65196.1| peptide chain release factor 2, programmed frameshift [Marinomonas
sp. MED121]
Length = 293
Score = 41.6 bits (96), Expect = 0.060, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S AS +F ++D + I+ D++ R SG GGQ V T++ V +THIPT
Sbjct: 140 RRHTSFAS-VFLSPEIDDNVEIDINPADLRTDTYRSSGAGGQHVNTTDSAVRITHIPT 196
>gi|307198741|gb|EFN79544.1| Peptide chain release factor 1-like, mitochondrial [Harpegnathos
saltator]
Length = 362
Score = 41.6 bits (96), Expect = 0.061, Method: Composition-based stats.
Identities = 19/35 (54%), Positives = 25/35 (71%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
I+E+D++ R SG GGQ V KTN+ V +THIPT
Sbjct: 211 INERDLKIETKRASGSGGQHVNKTNSAVRITHIPT 245
>gi|291561383|emb|CBL40182.1| bacterial peptide chain release factor 1 (bRF-1)
[butyrate-producing bacterium SS3/4]
Length = 357
Score = 41.6 bits (96), Expect = 0.061, Method: Composition-based stats.
Identities = 20/35 (57%), Positives = 25/35 (71%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
ID+KDI+ +R SG GGQ V T++ V LTHIPT
Sbjct: 215 IDDKDIRIDVMRASGNGGQCVNTTDSAVRLTHIPT 249
>gi|291453772|ref|ZP_06593162.1| peptide chain release factor 2 [Streptomyces albus J1074]
gi|359149446|ref|ZP_09182456.1| peptide chain release factor 2 [Streptomyces sp. S4]
gi|421740172|ref|ZP_16178444.1| bacterial peptide chain release factor 2 (bRF-2) [Streptomyces sp.
SM8]
gi|291356721|gb|EFE83623.1| peptide chain release factor 2 [Streptomyces albus J1074]
gi|406691412|gb|EKC95161.1| bacterial peptide chain release factor 2 (bRF-2) [Streptomyces sp.
SM8]
Length = 371
Score = 41.6 bits (96), Expect = 0.061, Method: Composition-based stats.
Identities = 18/36 (50%), Positives = 25/36 (69%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+IDE +++ R SGPGGQ V T++ V LTH+PT
Sbjct: 232 EIDESELRVDVYRSSGPGGQGVNTTDSAVRLTHLPT 267
>gi|377832078|ref|ZP_09815042.1| peptide chain release factor RF2 [Lactobacillus mucosae LM1]
gi|377554085|gb|EHT15800.1| peptide chain release factor RF2 [Lactobacillus mucosae LM1]
Length = 355
Score = 41.6 bits (96), Expect = 0.061, Method: Composition-based stats.
Identities = 25/58 (43%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S AS +LD S ID D++ R SG GGQ + KT + V +TH+PT
Sbjct: 195 RRHTSFASVDVMP-ELDDSVQIDIDPSDLRVDTFRSSGAGGQHINKTESAVRITHLPT 251
>gi|365875883|ref|ZP_09415408.1| peptide chain release factor-like protein [Elizabethkingia
anophelis Ag1]
gi|442587519|ref|ZP_21006335.1| peptide chain release factor-like protein [Elizabethkingia
anophelis R26]
gi|365756395|gb|EHM98309.1| peptide chain release factor-like protein [Elizabethkingia
anophelis Ag1]
gi|442562690|gb|ELR79909.1| peptide chain release factor-like protein [Elizabethkingia
anophelis R26]
Length = 232
Score = 41.6 bits (96), Expect = 0.061, Method: Composition-based stats.
Identities = 22/61 (36%), Positives = 33/61 (54%)
Query: 2 SIFRRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIP 61
S FR+ ++ ++++ ++ DEKDIQ + R G GGQ V K N V TH+P
Sbjct: 81 STFRKLHKRSNWFVGVFEIEDAEEIYFDEKDIQFQTTRSQGSGGQNVNKVNTAVRATHLP 140
Query: 62 T 62
T
Sbjct: 141 T 141
>gi|213019226|ref|ZP_03335033.1| protein chain release factor b [Wolbachia endosymbiont of Culex
quinquefasciatus JHB]
gi|212995335|gb|EEB55976.1| protein chain release factor b [Wolbachia endosymbiont of Culex
quinquefasciatus JHB]
Length = 337
Score = 41.6 bits (96), Expect = 0.061, Method: Composition-based stats.
Identities = 25/58 (43%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+RH S AS D + +DEKD++ R SG GGQ V KT + V +THIPT
Sbjct: 184 KRHTSFASVGVTPVIEDSIDI-VVDEKDLKIDTYRASGAGGQHVNKTESAVRITHIPT 240
>gi|190571741|ref|YP_001976099.1| protein chain release factor b [Wolbachia endosymbiont of Culex
quinquefasciatus Pel]
gi|190358013|emb|CAQ55482.1| protein chain release factor b [Wolbachia endosymbiont of Culex
quinquefasciatus Pel]
Length = 335
Score = 41.6 bits (96), Expect = 0.061, Method: Composition-based stats.
Identities = 25/58 (43%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+RH S AS D + +DEKD++ R SG GGQ V KT + V +THIPT
Sbjct: 182 KRHTSFASVGVTPVIEDSIDI-VVDEKDLKIDTYRASGAGGQHVNKTESAVRITHIPT 238
>gi|440632293|gb|ELR02212.1| hypothetical protein GMDG_01005 [Geomyces destructans 20631-21]
Length = 168
Score = 41.6 bits (96), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 25/35 (71%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+ E++ E F+ GSGPGGQ + KT++ V L H+PT
Sbjct: 39 LPEEEFTEAFLCGSGPGGQKINKTSSAVQLKHLPT 73
>gi|297693942|ref|XP_002824259.1| PREDICTED: peptide chain release factor 1, mitochondrial isoform 2
[Pongo abelii]
Length = 445
Score = 41.6 bits (96), Expect = 0.062, Method: Composition-based stats.
Identities = 19/36 (52%), Positives = 24/36 (66%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
K+D KD++ R GPGGQ V KT++ V L HIPT
Sbjct: 294 KLDPKDLRIDTFRAKGPGGQHVNKTDSAVRLVHIPT 329
>gi|146340475|ref|YP_001205523.1| peptide chain release factor 2 [Bradyrhizobium sp. ORS 278]
gi|146193281|emb|CAL77297.1| Peptide chain release factor 2 (RF-2) [Bradyrhizobium sp. ORS 278]
Length = 323
Score = 41.6 bits (96), Expect = 0.062, Method: Composition-based stats.
Identities = 27/59 (45%), Positives = 34/59 (57%), Gaps = 3/59 (5%)
Query: 5 RRHLSLAS-SLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S +S +F D D K+ I E D++ +R G GGQ V KT + V LTHIPT
Sbjct: 156 RRHTSFSSVQIFPVID-DSIKI-DIKESDVRVDTMRSGGAGGQHVNKTESAVRLTHIPT 212
>gi|418007783|ref|ZP_12647657.1| peptide chain release factor 1 [Lactobacillus casei UW4]
gi|410548165|gb|EKQ22380.1| peptide chain release factor 1 [Lactobacillus casei UW4]
Length = 359
Score = 41.6 bits (96), Expect = 0.062, Method: Composition-based stats.
Identities = 20/36 (55%), Positives = 25/36 (69%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
KID KDI+ R SG GGQ V KT++ V +THIP+
Sbjct: 217 KIDPKDIRTDVYRSSGAGGQHVNKTSSAVRMTHIPS 252
>gi|413958362|ref|ZP_11397601.1| peptide chain release factor 2 [Burkholderia sp. SJ98]
gi|413940942|gb|EKS72902.1| peptide chain release factor 2 [Burkholderia sp. SJ98]
Length = 248
Score = 41.6 bits (96), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 6 RHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RH S SS+F ++D S +I+ DI+ R SG GGQ + KT++ V LTH PT
Sbjct: 96 RHTSF-SSVFVYPEIDDSIEIEINPADIRTDTYRASGAGGQHINKTDSAVRLTHAPT 151
>gi|367477693|ref|ZP_09477040.1| Peptide chain release factor 2 (RF-2) [Bradyrhizobium sp. ORS 285]
gi|365270143|emb|CCD89508.1| Peptide chain release factor 2 (RF-2) [Bradyrhizobium sp. ORS 285]
Length = 323
Score = 41.6 bits (96), Expect = 0.062, Method: Composition-based stats.
Identities = 27/59 (45%), Positives = 34/59 (57%), Gaps = 3/59 (5%)
Query: 5 RRHLSLAS-SLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S +S +F D D K+ I E D++ +R G GGQ V KT + V LTHIPT
Sbjct: 156 RRHTSFSSVQIFPVID-DSIKI-DIKESDVRVDTMRSGGAGGQHVNKTESAVRLTHIPT 212
>gi|328768224|gb|EGF78271.1| hypothetical protein BATDEDRAFT_90766 [Batrachochytrium
dendrobatidis JAM81]
Length = 177
Score = 41.6 bits (96), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 22/33 (66%)
Query: 30 EKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
E D+ E+F +GSGPGGQ + K + V L H PT
Sbjct: 68 ETDLVEKFTKGSGPGGQKINKCKHSVQLWHTPT 100
>gi|206889859|ref|YP_002249325.1| peptide chain release factor [Thermodesulfovibrio yellowstonii
DSM 11347]
gi|206741797|gb|ACI20854.1| peptide chain release factor [Thermodesulfovibrio yellowstonii
DSM 11347]
Length = 114
Score = 41.6 bits (96), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 25/35 (71%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
I E DI+E+F++ SG GGQ + KT+ V L HIP+
Sbjct: 23 IKESDIEEKFIKCSGHGGQKLNKTSTGVYLKHIPS 57
>gi|195952400|ref|YP_002120690.1| peptide chain release factor 2 [Hydrogenobaculum sp. Y04AAS1]
gi|195932012|gb|ACG56712.1| peptide chain release factor 2 [Hydrogenobaculum sp. Y04AAS1]
Length = 375
Score = 41.6 bits (96), Expect = 0.062, Method: Composition-based stats.
Identities = 25/58 (43%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S AS L +++ +I E+D++ R SG GGQ V KT+ V +THIPT
Sbjct: 208 RRHTSFASVLVVP-EVNEDVNIEIKEEDLRIDTYRASGAGGQYVNKTDTAVRITHIPT 264
>gi|378718798|ref|YP_005283687.1| peptide chain release factor 2 [Gordonia polyisoprenivorans VH2]
gi|375753501|gb|AFA74321.1| peptide chain release factor 2 [Gordonia polyisoprenivorans VH2]
Length = 371
Score = 41.6 bits (96), Expect = 0.063, Method: Composition-based stats.
Identities = 18/35 (51%), Positives = 25/35 (71%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
IDE +++ R SGPGGQ+V T++ V LTH+PT
Sbjct: 235 IDENELKVDVYRSSGPGGQSVNTTDSAVRLTHLPT 269
>gi|302560365|ref|ZP_07312707.1| peptide chain release factor 2 [Streptomyces griseoflavus Tu4000]
gi|302477983|gb|EFL41076.1| peptide chain release factor 2 [Streptomyces griseoflavus Tu4000]
Length = 368
Score = 41.6 bits (96), Expect = 0.063, Method: Composition-based stats.
Identities = 18/36 (50%), Positives = 25/36 (69%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+IDE +++ R SGPGGQ V T++ V LTH+PT
Sbjct: 232 EIDESELRVDVYRSSGPGGQGVNTTDSAVRLTHLPT 267
>gi|440696583|ref|ZP_20879039.1| peptide chain release factor 2 [Streptomyces turgidiscabies Car8]
gi|440281166|gb|ELP68825.1| peptide chain release factor 2 [Streptomyces turgidiscabies Car8]
Length = 368
Score = 41.6 bits (96), Expect = 0.063, Method: Composition-based stats.
Identities = 18/36 (50%), Positives = 25/36 (69%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+IDE +++ R SGPGGQ V T++ V LTH+PT
Sbjct: 232 EIDESELRVDVYRSSGPGGQGVNTTDSAVRLTHLPT 267
>gi|410463281|ref|ZP_11316810.1| peptide chain release factor 2 [Desulfovibrio magneticus str.
Maddingley MBC34]
gi|409983589|gb|EKO39949.1| peptide chain release factor 2 [Desulfovibrio magneticus str.
Maddingley MBC34]
Length = 285
Score = 41.6 bits (96), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 36/60 (60%), Gaps = 3/60 (5%)
Query: 5 RRHLSLAS-SLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTD 63
RRH S AS ++ +D ++ E D++ R SGPGGQ V KT++ + +TH+PT+
Sbjct: 126 RRHTSFASVDVYPDAGVDID--IEVKEDDLRVDVFRASGPGGQHVNKTSSAIRITHLPTN 183
>gi|377809277|ref|YP_005004498.1| peptide chain release factor 2 [Pediococcus claussenii ATCC
BAA-344]
gi|361056018|gb|AEV94822.1| peptide chain release factor 2 [Pediococcus claussenii ATCC
BAA-344]
Length = 332
Score = 41.6 bits (96), Expect = 0.063, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S AS +LD S I+ D++ R SG GGQ + KT++ V +TH+PT
Sbjct: 172 RRHTSFASVDVMP-ELDESVEVNINPDDLRVDVYRSSGAGGQHINKTSSAVRITHLPT 228
>gi|359769543|ref|ZP_09273301.1| peptide chain release factor 2 [Gordonia polyisoprenivorans NBRC
16320]
gi|359313059|dbj|GAB26134.1| peptide chain release factor 2 [Gordonia polyisoprenivorans NBRC
16320]
Length = 371
Score = 41.6 bits (96), Expect = 0.063, Method: Composition-based stats.
Identities = 18/35 (51%), Positives = 25/35 (71%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
IDE +++ R SGPGGQ+V T++ V LTH+PT
Sbjct: 235 IDENELKVDVYRSSGPGGQSVNTTDSAVRLTHLPT 269
>gi|452943243|ref|YP_007499408.1| peptide chain release factor 2 [Hydrogenobaculum sp. HO]
gi|452881661|gb|AGG14365.1| peptide chain release factor 2 [Hydrogenobaculum sp. HO]
Length = 375
Score = 41.6 bits (96), Expect = 0.064, Method: Composition-based stats.
Identities = 25/58 (43%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S AS L +++ +I E+D++ R SG GGQ V KT+ V +THIPT
Sbjct: 208 RRHTSFASVLVVP-EVNEDVNIEIKEEDLRIDTYRASGAGGQYVNKTDTAVRITHIPT 264
>gi|328948955|ref|YP_004366292.1| hypothetical protein Tresu_2126 [Treponema succinifaciens DSM 2489]
gi|328449279|gb|AEB14995.1| hypothetical protein Tresu_2126 [Treponema succinifaciens DSM 2489]
Length = 381
Score = 41.6 bits (96), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S AS ++ LD S ID KD++ R G GGQ V KT + V THIPT
Sbjct: 213 RRHTSFAS-VYVFPVLDDSIEVNIDPKDLRVDTYRSGGKGGQHVNKTESAVRFTHIPT 269
>gi|297182635|gb|ADI18793.1| protein chain release factor a [uncultured SAR11 cluster bacterium
HF4000_37C10]
Length = 358
Score = 41.6 bits (96), Expect = 0.064, Method: Composition-based stats.
Identities = 18/35 (51%), Positives = 26/35 (74%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
I+EKD++ R SGPGGQ+V T++ V +TH+PT
Sbjct: 216 INEKDLRIDVFRSSGPGGQSVNTTDSAVRITHLPT 250
>gi|302521474|ref|ZP_07273816.1| peptide chain release factor 2 [Streptomyces sp. SPB78]
gi|318056789|ref|ZP_07975512.1| peptide chain release factor 2 [Streptomyces sp. SA3_actG]
gi|318081122|ref|ZP_07988454.1| peptide chain release factor 2 [Streptomyces sp. SA3_actF]
gi|302430369|gb|EFL02185.1| peptide chain release factor 2 [Streptomyces sp. SPB78]
Length = 371
Score = 41.6 bits (96), Expect = 0.064, Method: Composition-based stats.
Identities = 18/36 (50%), Positives = 25/36 (69%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+IDE +++ R SGPGGQ V T++ V LTH+PT
Sbjct: 232 EIDESELRVDVYRSSGPGGQGVNTTDSAVRLTHLPT 267
>gi|239907246|ref|YP_002953987.1| peptide chain release factor 2 [Desulfovibrio magneticus RS-1]
gi|239797112|dbj|BAH76101.1| peptide chain release factor 2 [Desulfovibrio magneticus RS-1]
Length = 285
Score = 41.6 bits (96), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 36/60 (60%), Gaps = 3/60 (5%)
Query: 5 RRHLSLAS-SLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTD 63
RRH S AS ++ +D ++ E D++ R SGPGGQ V KT++ + +TH+PT+
Sbjct: 126 RRHTSFASVDVYPDAGVDID--IEVKEDDLRVDVFRASGPGGQHVNKTSSAIRITHLPTN 183
>gi|353327645|ref|ZP_08969972.1| peptide chain release factor 1 [Wolbachia endosymbiont wVitB of
Nasonia vitripennis]
Length = 363
Score = 41.6 bits (96), Expect = 0.064, Method: Composition-based stats.
Identities = 18/36 (50%), Positives = 27/36 (75%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+I+EKD++ R SGPGGQ+V T++ V +TH+PT
Sbjct: 217 EIEEKDLRIDVYRSSGPGGQSVNTTDSAVRVTHLPT 252
>gi|294812911|ref|ZP_06771554.1| Peptide chain release factor 2 [Streptomyces clavuligerus ATCC
27064]
gi|326441313|ref|ZP_08216047.1| peptide chain release factor 2 [Streptomyces clavuligerus ATCC
27064]
gi|294325510|gb|EFG07153.1| Peptide chain release factor 2 [Streptomyces clavuligerus ATCC
27064]
Length = 368
Score = 41.6 bits (96), Expect = 0.064, Method: Composition-based stats.
Identities = 18/36 (50%), Positives = 25/36 (69%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+IDE +++ R SGPGGQ V T++ V +THIPT
Sbjct: 232 EIDETELRVDVYRASGPGGQGVNTTDSAVRITHIPT 267
>gi|444336071|ref|ZP_21150664.1| peptide chain release factor 1 [Aggregatibacter
actinomycetemcomitans serotype a str. A160]
gi|443548771|gb|ELT57931.1| peptide chain release factor 1 [Aggregatibacter
actinomycetemcomitans serotype a str. A160]
Length = 340
Score = 41.6 bits (96), Expect = 0.065, Method: Composition-based stats.
Identities = 19/44 (43%), Positives = 30/44 (68%)
Query: 19 DLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+L S++P+I+ D++ R SG GGQ + KT++ V +THIPT
Sbjct: 188 ELPESEMPEINPADLRIDTYRASGAGGQHINKTDSAVRITHIPT 231
>gi|46580270|ref|YP_011078.1| peptide chain release factor 2, programmed frameshift, partial
[Desulfovibrio vulgaris str. Hildenborough]
gi|387153304|ref|YP_005702240.1| hypothetical protein Deval_1446 [Desulfovibrio vulgaris RCH1]
gi|46449687|gb|AAS96337.1| peptide chain release factor 2, programmed frameshift
[Desulfovibrio vulgaris str. Hildenborough]
gi|311233748|gb|ADP86602.1| hypothetical protein Deval_1446 [Desulfovibrio vulgaris RCH1]
Length = 371
Score = 41.6 bits (96), Expect = 0.065, Method: Composition-based stats.
Identities = 28/62 (45%), Positives = 35/62 (56%), Gaps = 9/62 (14%)
Query: 5 RRHLSLASSLFRKYDL--DYSKVPKIDEKDIQERF--VRGSGPGGQAVAKTNNCVVLTHI 60
RRH S AS D+ D + KI+ KD R R SGPGGQ+V T++ V +THI
Sbjct: 212 RRHTSFAS-----VDVIPDVGQDIKIEIKDTDLRIDVFRSSGPGGQSVNTTSSAVRVTHI 266
Query: 61 PT 62
PT
Sbjct: 267 PT 268
>gi|387771142|ref|ZP_10127309.1| peptide chain release factor 1 [Pasteurella bettyae CCUG 2042]
gi|386902613|gb|EIJ67449.1| peptide chain release factor 1 [Pasteurella bettyae CCUG 2042]
Length = 360
Score = 41.6 bits (96), Expect = 0.065, Method: Composition-based stats.
Identities = 19/44 (43%), Positives = 30/44 (68%)
Query: 19 DLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+L S++P+I+ D++ R SG GGQ + KT++ V +THIPT
Sbjct: 208 ELPESEMPEINPADLRIDTYRASGAGGQHINKTDSAVRITHIPT 251
>gi|337278673|ref|YP_004618144.1| peptide chain release factor 2 [Ramlibacter tataouinensis TTB310]
gi|334729749|gb|AEG92125.1| candidate peptide chain release factor 2 [Ramlibacter tataouinensis
TTB310]
Length = 300
Score = 41.6 bits (96), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 6 RHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RH S AS +F ++D S I+ D++ R SG GGQ + KT++ V LTH+PT
Sbjct: 148 RHTSFAS-VFVYPEVDDSVEININPADVRVDTFRASGAGGQHINKTDSAVRLTHVPT 203
>gi|315634081|ref|ZP_07889370.1| peptide chain release factor RF1 [Aggregatibacter segnis ATCC
33393]
gi|315477331|gb|EFU68074.1| peptide chain release factor RF1 [Aggregatibacter segnis ATCC
33393]
Length = 360
Score = 41.6 bits (96), Expect = 0.065, Method: Composition-based stats.
Identities = 19/44 (43%), Positives = 30/44 (68%)
Query: 19 DLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+L S++P+I+ D++ R SG GGQ + KT++ V +THIPT
Sbjct: 208 ELPESEMPEINPSDLRIDTYRASGAGGQHINKTDSAVRITHIPT 251
>gi|294629650|ref|ZP_06708210.1| peptide chain release factor 2 [Streptomyces sp. e14]
gi|292832983|gb|EFF91332.1| peptide chain release factor 2 [Streptomyces sp. e14]
Length = 371
Score = 41.6 bits (96), Expect = 0.065, Method: Composition-based stats.
Identities = 18/36 (50%), Positives = 25/36 (69%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+IDE +++ R SGPGGQ V T++ V LTH+PT
Sbjct: 232 EIDESELRVDVYRSSGPGGQGVNTTDSAVRLTHLPT 267
>gi|120602348|ref|YP_966748.1| peptide chain release factor 2 [Desulfovibrio vulgaris DP4]
gi|120562577|gb|ABM28321.1| bacterial peptide chain release factor 2 (bRF-2) [Desulfovibrio
vulgaris DP4]
Length = 310
Score = 41.6 bits (96), Expect = 0.065, Method: Composition-based stats.
Identities = 28/62 (45%), Positives = 35/62 (56%), Gaps = 9/62 (14%)
Query: 5 RRHLSLASSLFRKYDL--DYSKVPKIDEKDIQERF--VRGSGPGGQAVAKTNNCVVLTHI 60
RRH S AS D+ D + KI+ KD R R SGPGGQ+V T++ V +THI
Sbjct: 151 RRHTSFAS-----VDVIPDVGQDIKIEIKDTDLRIDVFRSSGPGGQSVNTTSSAVRVTHI 205
Query: 61 PT 62
PT
Sbjct: 206 PT 207
>gi|74317541|ref|YP_315281.1| hypothetical protein Tbd_1523 [Thiobacillus denitrificans ATCC
25259]
gi|74057036|gb|AAZ97476.1| conserved hypothetical protein [Thiobacillus denitrificans ATCC
25259]
Length = 141
Score = 41.6 bits (96), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 24/31 (77%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVL 57
++DE++IQE FVR SGPGGQ V K ++ V L
Sbjct: 9 ELDEREIQEDFVRASGPGGQNVNKVSSAVQL 39
>gi|373450051|ref|ZP_09542126.1| peptide chain release factor 1 [Wolbachia pipientis wAlbB]
gi|371932744|emb|CCE77114.1| peptide chain release factor 1 [Wolbachia pipientis wAlbB]
Length = 363
Score = 41.6 bits (96), Expect = 0.065, Method: Composition-based stats.
Identities = 18/36 (50%), Positives = 27/36 (75%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+I+EKD++ R SGPGGQ+V T++ V +TH+PT
Sbjct: 217 EIEEKDLRIDVYRSSGPGGQSVNTTDSAVRVTHLPT 252
>gi|365882317|ref|ZP_09421564.1| Peptide chain release factor 2 (RF-2) [Bradyrhizobium sp. ORS 375]
gi|365289374|emb|CCD94095.1| Peptide chain release factor 2 (RF-2) [Bradyrhizobium sp. ORS 375]
Length = 323
Score = 41.6 bits (96), Expect = 0.065, Method: Composition-based stats.
Identities = 27/59 (45%), Positives = 34/59 (57%), Gaps = 3/59 (5%)
Query: 5 RRHLSLAS-SLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S +S +F D D K+ I E D++ +R G GGQ V KT + V LTHIPT
Sbjct: 156 RRHTSFSSVQIFPVID-DSIKI-DIKESDVRVDTMRSGGAGGQHVNKTESAVRLTHIPT 212
>gi|359684765|ref|ZP_09254766.1| peptide chain release factor 2 [Leptospira santarosai str.
2000030832]
Length = 335
Score = 41.6 bits (96), Expect = 0.065, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S S + ++D KI+EKDI+ R SG GGQ V T++ V +TH+P+
Sbjct: 214 RRHTSFVS-VHVSPEIDDEIDIKIEEKDIRVDVYRSSGAGGQHVNTTDSAVRITHLPS 270
>gi|358374060|dbj|GAA90655.1| peptidyl-tRNA hydrolase domain protein [Aspergillus kawachii IFO
4308]
Length = 204
Score = 41.6 bits (96), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 25/36 (69%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
KI + D+ +++G+GPGGQ + KTN+ V + H PT
Sbjct: 45 KIQDADVTISYLKGTGPGGQKINKTNSAVQIIHKPT 80
>gi|190570518|ref|YP_001974876.1| peptide chain release factor 1 [Wolbachia endosymbiont of Culex
quinquefasciatus Pel]
gi|213019274|ref|ZP_03335081.1| peptide chain release factor 1 [Wolbachia endosymbiont of Culex
quinquefasciatus JHB]
gi|238054477|sp|B3CL87.1|RF1_WOLPP RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|190356790|emb|CAQ54152.1| peptide chain release factor 1 [Wolbachia endosymbiont of Culex
quinquefasciatus Pel]
gi|212995383|gb|EEB56024.1| peptide chain release factor 1 [Wolbachia endosymbiont of Culex
quinquefasciatus JHB]
Length = 363
Score = 41.6 bits (96), Expect = 0.065, Method: Composition-based stats.
Identities = 18/36 (50%), Positives = 27/36 (75%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+I+EKD++ R SGPGGQ+V T++ V +TH+PT
Sbjct: 217 EIEEKDLRIDVYRSSGPGGQSVNTTDSAVRVTHLPT 252
>gi|386395566|ref|ZP_10080344.1| peptide chain release factor 2 [Bradyrhizobium sp. WSM1253]
gi|385736192|gb|EIG56388.1| peptide chain release factor 2 [Bradyrhizobium sp. WSM1253]
Length = 376
Score = 41.6 bits (96), Expect = 0.066, Method: Composition-based stats.
Identities = 27/59 (45%), Positives = 35/59 (59%), Gaps = 3/59 (5%)
Query: 5 RRHLSLAS-SLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S +S ++F D D K+ I E D++ +R G GGQ V KT + V LTHIPT
Sbjct: 210 RRHTSFSSVAVFPVID-DTIKI-DIKESDVRVDTMRSGGAGGQHVNKTESAVRLTHIPT 266
>gi|374575227|ref|ZP_09648323.1| peptide chain release factor 2 [Bradyrhizobium sp. WSM471]
gi|374423548|gb|EHR03081.1| peptide chain release factor 2 [Bradyrhizobium sp. WSM471]
Length = 376
Score = 41.6 bits (96), Expect = 0.066, Method: Composition-based stats.
Identities = 27/59 (45%), Positives = 35/59 (59%), Gaps = 3/59 (5%)
Query: 5 RRHLSLAS-SLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S +S ++F D D K+ I E D++ +R G GGQ V KT + V LTHIPT
Sbjct: 210 RRHTSFSSVAVFPVID-DTIKI-DIKESDVRVDTMRSGGAGGQHVNKTESAVRLTHIPT 266
>gi|416062788|ref|ZP_11581489.1| peptide chain release factor 1 [Aggregatibacter
actinomycetemcomitans serotype e str. SCC393]
gi|347996927|gb|EGY37965.1| peptide chain release factor 1 [Aggregatibacter
actinomycetemcomitans serotype e str. SCC393]
Length = 361
Score = 41.6 bits (96), Expect = 0.066, Method: Composition-based stats.
Identities = 19/44 (43%), Positives = 30/44 (68%)
Query: 19 DLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+L S++P+I+ D++ R SG GGQ + KT++ V +THIPT
Sbjct: 209 ELPESEMPEINPADLRIDTYRASGAGGQHINKTDSAVRITHIPT 252
>gi|333024883|ref|ZP_08452947.1| putative peptide chain release factor 2 [Streptomyces sp. Tu6071]
gi|332744735|gb|EGJ75176.1| putative peptide chain release factor 2 [Streptomyces sp. Tu6071]
Length = 373
Score = 41.6 bits (96), Expect = 0.066, Method: Composition-based stats.
Identities = 18/36 (50%), Positives = 25/36 (69%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+IDE +++ R SGPGGQ V T++ V LTH+PT
Sbjct: 234 EIDESELRVDVYRSSGPGGQGVNTTDSAVRLTHLPT 269
>gi|379009567|ref|YP_005267380.1| peptide chain release factor RF-2 [Wigglesworthia glossinidia
endosymbiont of Glossina morsitans morsitans (Yale
colony)]
gi|375158091|gb|AFA41157.1| peptide chain release factor RF-2 [Wigglesworthia glossinidia
endosymbiont of Glossina morsitans morsitans (Yale
colony)]
Length = 283
Score = 41.6 bits (96), Expect = 0.067, Method: Composition-based stats.
Identities = 24/59 (40%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTD 63
+RH S AS +F D+D + I+ DI+ R SG GGQ V +T + V +TH+PT+
Sbjct: 130 KRHTSFAS-VFVYPDIDQNIKININFADIRIDVYRASGAGGQHVNRTESAVRITHLPTN 187
>gi|416050688|ref|ZP_11577064.1| peptide chain release factor 1 [Aggregatibacter
actinomycetemcomitans serotype e str. SC1083]
gi|418465106|ref|ZP_13036043.1| peptide chain release factor 1 [Aggregatibacter
actinomycetemcomitans RhAA1]
gi|347993878|gb|EGY35207.1| peptide chain release factor 1 [Aggregatibacter
actinomycetemcomitans serotype e str. SC1083]
gi|359756038|gb|EHK90197.1| peptide chain release factor 1 [Aggregatibacter
actinomycetemcomitans RhAA1]
Length = 360
Score = 41.6 bits (96), Expect = 0.067, Method: Composition-based stats.
Identities = 19/44 (43%), Positives = 30/44 (68%)
Query: 19 DLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+L S++P+I+ D++ R SG GGQ + KT++ V +THIPT
Sbjct: 208 ELPESEMPEINPADLRIDTYRASGAGGQHINKTDSAVRITHIPT 251
>gi|387121893|ref|YP_006287776.1| peptide chain release factor 1 [Aggregatibacter
actinomycetemcomitans D7S-1]
gi|415763957|ref|ZP_11482264.1| peptide chain release factor 1 [Aggregatibacter
actinomycetemcomitans D17P-3]
gi|416040612|ref|ZP_11574456.1| peptide chain release factor 1 [Aggregatibacter
actinomycetemcomitans serotype a str. H5P1]
gi|416043980|ref|ZP_11574838.1| peptide chain release factor 1 [Aggregatibacter
actinomycetemcomitans serotype d str. I63B]
gi|429733897|ref|ZP_19267949.1| peptide chain release factor 1 [Aggregatibacter
actinomycetemcomitans Y4]
gi|347993566|gb|EGY34917.1| peptide chain release factor 1 [Aggregatibacter
actinomycetemcomitans serotype a str. H5P1]
gi|347996676|gb|EGY37735.1| peptide chain release factor 1 [Aggregatibacter
actinomycetemcomitans serotype d str. I63B]
gi|348654424|gb|EGY70048.1| peptide chain release factor 1 [Aggregatibacter
actinomycetemcomitans D17P-3]
gi|385876385|gb|AFI87944.1| peptide chain release factor 1 [Aggregatibacter
actinomycetemcomitans D7S-1]
gi|429154077|gb|EKX96831.1| peptide chain release factor 1 [Aggregatibacter
actinomycetemcomitans Y4]
Length = 360
Score = 41.6 bits (96), Expect = 0.067, Method: Composition-based stats.
Identities = 19/44 (43%), Positives = 30/44 (68%)
Query: 19 DLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+L S++P+I+ D++ R SG GGQ + KT++ V +THIPT
Sbjct: 208 ELPESEMPEINPADLRIDTYRASGAGGQHINKTDSAVRITHIPT 251
>gi|29831645|ref|NP_826279.1| peptide chain release factor 2 [Streptomyces avermitilis MA-4680]
gi|81717933|sp|Q82D82.1|RF2_STRAW RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|29608761|dbj|BAC72814.1| putative peptide chain release factor 2 [Streptomyces avermitilis
MA-4680]
Length = 368
Score = 41.6 bits (96), Expect = 0.067, Method: Composition-based stats.
Identities = 18/36 (50%), Positives = 25/36 (69%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+IDE +++ R SGPGGQ V T++ V LTH+PT
Sbjct: 232 EIDESELRVDVYRSSGPGGQGVNTTDSAVRLTHLPT 267
>gi|373488399|ref|ZP_09579064.1| bacterial peptide chain release factor 2 (bRF-2) [Holophaga foetida
DSM 6591]
gi|372006724|gb|EHP07356.1| bacterial peptide chain release factor 2 (bRF-2) [Holophaga foetida
DSM 6591]
Length = 368
Score = 41.6 bits (96), Expect = 0.067, Method: Composition-based stats.
Identities = 23/58 (39%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S A+ ++ +LD + I +KD++ R SG GGQ V +T + V TH+PT
Sbjct: 209 RRHTSFAA-VYVSPELDDTINVDIPDKDLRIDVFRASGAGGQHVNRTESAVRFTHLPT 265
>gi|358339953|dbj|GAA47915.1| peptide chain release factor 1 [Clonorchis sinensis]
Length = 446
Score = 41.6 bits (96), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 24/35 (68%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+ E+D+ F R SG GGQ V +T++ V LTHIPT
Sbjct: 291 LPERDLSWAFFRASGAGGQHVNRTDSAVRLTHIPT 325
>gi|416068899|ref|ZP_11582975.1| peptide chain release factor 1 [Aggregatibacter
actinomycetemcomitans serotype f str. D18P1]
gi|348000526|gb|EGY41306.1| peptide chain release factor 1 [Aggregatibacter
actinomycetemcomitans serotype f str. D18P1]
Length = 360
Score = 41.6 bits (96), Expect = 0.067, Method: Composition-based stats.
Identities = 19/44 (43%), Positives = 30/44 (68%)
Query: 19 DLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+L S++P+I+ D++ R SG GGQ + KT++ V +THIPT
Sbjct: 208 ELPESEMPEINPADLRIDTYRASGAGGQHINKTDSAVRITHIPT 251
>gi|290959957|ref|YP_003491139.1| peptide chain release factor 2 [Streptomyces scabiei 87.22]
gi|260649483|emb|CBG72598.1| peptide chain release factor 2 [Streptomyces scabiei 87.22]
Length = 368
Score = 41.6 bits (96), Expect = 0.067, Method: Composition-based stats.
Identities = 18/36 (50%), Positives = 25/36 (69%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+IDE +++ R SGPGGQ V T++ V LTH+PT
Sbjct: 232 EIDESELRVDVYRSSGPGGQGVNTTDSAVRLTHLPT 267
>gi|258405989|ref|YP_003198731.1| hypothetical protein Dret_1869 [Desulfohalobium retbaense DSM 5692]
gi|257798216|gb|ACV69153.1| hypothetical protein Dret_1869 [Desulfohalobium retbaense DSM 5692]
Length = 371
Score = 41.6 bits (96), Expect = 0.067, Method: Composition-based stats.
Identities = 22/58 (37%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S AS D ++ ++++DI+ R SGPGGQ V KT++ + +TH P+
Sbjct: 212 RRHTSFASVDVYPEAADDIEI-DVNDEDIRVDVFRSSGPGGQNVNKTSSAIRITHFPS 268
>gi|237807749|ref|YP_002892189.1| peptide chain release factor 2 [Tolumonas auensis DSM 9187]
gi|259585231|sp|C4LCN9.1|RF2_TOLAT RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|237500010|gb|ACQ92603.1| hypothetical protein Tola_0975 [Tolumonas auensis DSM 9187]
Length = 365
Score = 41.6 bits (96), Expect = 0.067, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTDS 64
RRH S S+ F ++D +I+ D++ R SG GGQ V +T + V +THIPT++
Sbjct: 212 RRHTSFCSA-FVYPEIDEDVEIEINPADLRIDVYRASGAGGQHVNRTESAVRITHIPTNT 270
>gi|312142853|ref|YP_003994299.1| peptide chain release factor 2 [Halanaerobium hydrogeniformans]
gi|311903504|gb|ADQ13945.1| peptide chain release factor 2 [Halanaerobium hydrogeniformans]
Length = 346
Score = 41.6 bits (96), Expect = 0.068, Method: Composition-based stats.
Identities = 26/58 (44%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S AS +LD IDE D++ R SG GGQ V KT++ V +TH PT
Sbjct: 190 RRHTSFASVDVLP-ELDDELEVDIDENDLRIETYRASGAGGQHVNKTDSAVRITHQPT 246
>gi|256833004|ref|YP_003161731.1| peptide chain release factor 1 [Jonesia denitrificans DSM 20603]
gi|256686535|gb|ACV09428.1| peptide chain release factor 1 [Jonesia denitrificans DSM 20603]
Length = 361
Score = 41.6 bits (96), Expect = 0.068, Method: Composition-based stats.
Identities = 18/36 (50%), Positives = 26/36 (72%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+ID+ D++ R SGPGGQ+V T++ V +THIPT
Sbjct: 219 EIDQNDLRIDVYRSSGPGGQSVNTTDSAVRITHIPT 254
>gi|456355221|dbj|BAM89666.1| peptide chain release factor 2 [Agromonas oligotrophica S58]
Length = 323
Score = 41.6 bits (96), Expect = 0.068, Method: Composition-based stats.
Identities = 27/59 (45%), Positives = 34/59 (57%), Gaps = 3/59 (5%)
Query: 5 RRHLSLAS-SLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S +S +F D D K+ I E D++ +R G GGQ V KT + V LTHIPT
Sbjct: 156 RRHTSFSSVQIFPVID-DSIKI-DIKESDVRVDTMRSGGAGGQHVNKTESAVRLTHIPT 212
>gi|400294570|gb|AFP81706.1| bacterial peptide chain release factor 2 [Lactobacillus brevis]
Length = 343
Score = 41.6 bits (96), Expect = 0.068, Method: Composition-based stats.
Identities = 25/58 (43%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S AS +LD S +I+ D++ R SG GGQ V KT++ V +TH+PT
Sbjct: 183 RRHTSFASVDVLP-ELDDSVDVEINPADLKVDVYRASGAGGQHVNKTSSAVRITHLPT 239
>gi|297620931|ref|YP_003709068.1| Peptide chain release factor 1 [Waddlia chondrophila WSU 86-1044]
gi|297376232|gb|ADI38062.1| Peptide chain release factor 1 [Waddlia chondrophila WSU 86-1044]
gi|337293247|emb|CCB91238.1| peptide chain release factor 1 [Waddlia chondrophila 2032/99]
Length = 354
Score = 41.6 bits (96), Expect = 0.068, Method: Composition-based stats.
Identities = 20/36 (55%), Positives = 25/36 (69%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+IDEKD++ R SG GGQ V T++ V LTHIPT
Sbjct: 215 QIDEKDLRVDTYRASGAGGQHVNTTDSAVRLTHIPT 250
>gi|288958700|ref|YP_003449041.1| hypothetical protein AZL_018590 [Azospirillum sp. B510]
gi|288911008|dbj|BAI72497.1| hypothetical protein AZL_018590 [Azospirillum sp. B510]
Length = 140
Score = 41.6 bits (96), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 21/30 (70%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVL 57
+DE ++QE FVR SGPGGQ V KT V L
Sbjct: 10 LDESELQEEFVRASGPGGQHVNKTETAVQL 39
>gi|456385063|gb|EMF50641.1| prfB protein [Streptomyces bottropensis ATCC 25435]
Length = 368
Score = 41.6 bits (96), Expect = 0.069, Method: Composition-based stats.
Identities = 18/36 (50%), Positives = 25/36 (69%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+IDE +++ R SGPGGQ V T++ V LTH+PT
Sbjct: 232 EIDESELRVDVYRSSGPGGQGVNTTDSAVRLTHLPT 267
>gi|297200074|ref|ZP_06917471.1| peptide chain release factor 2 [Streptomyces sviceus ATCC 29083]
gi|297147562|gb|EDY54581.2| peptide chain release factor 2 [Streptomyces sviceus ATCC 29083]
Length = 368
Score = 41.6 bits (96), Expect = 0.069, Method: Composition-based stats.
Identities = 18/36 (50%), Positives = 25/36 (69%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+IDE +++ R SGPGGQ V T++ V LTH+PT
Sbjct: 232 EIDESELRVDVYRSSGPGGQGVNTTDSAVRLTHLPT 267
>gi|256828464|ref|YP_003157192.1| peptide chain release factor 2 [Desulfomicrobium baculatum DSM
4028]
gi|256577640|gb|ACU88776.1| bacterial peptide chain release factor 2 (bRF- 2) [Desulfomicrobium
baculatum DSM 4028]
Length = 369
Score = 41.6 bits (96), Expect = 0.069, Method: Composition-based stats.
Identities = 24/59 (40%), Positives = 35/59 (59%), Gaps = 3/59 (5%)
Query: 5 RRHLSLAS-SLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S AS ++ D +I ++D++ R SGPGGQ+V T++ V +THIPT
Sbjct: 212 RRHTSFASVDVYPDAGQDIEI--EIRDEDVRVDIFRSSGPGGQSVNTTDSAVRVTHIPT 268
>gi|116493078|ref|YP_804813.1| peptide chain release factor 1 [Pediococcus pentosaceus ATCC 25745]
gi|421894487|ref|ZP_16324975.1| peptide chain release factor 1 [Pediococcus pentosaceus IE-3]
gi|116103228|gb|ABJ68371.1| bacterial peptide chain release factor 1 (bRF-1) [Pediococcus
pentosaceus ATCC 25745]
gi|385272577|emb|CCG90347.1| peptide chain release factor 1 [Pediococcus pentosaceus IE-3]
Length = 359
Score = 41.6 bits (96), Expect = 0.069, Method: Composition-based stats.
Identities = 18/36 (50%), Positives = 26/36 (72%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+ID+KDI+ R SG GGQ + KT++ V +TH+PT
Sbjct: 216 EIDQKDIRTDVYRSSGAGGQHINKTSSAVRMTHLPT 251
>gi|455649556|gb|EMF28360.1| peptide chain release factor 2 [Streptomyces gancidicus BKS 13-15]
Length = 368
Score = 41.6 bits (96), Expect = 0.069, Method: Composition-based stats.
Identities = 18/36 (50%), Positives = 25/36 (69%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+IDE +++ R SGPGGQ V T++ V LTH+PT
Sbjct: 232 EIDESELRVDVYRSSGPGGQGVNTTDSAVRLTHLPT 267
>gi|443673635|ref|ZP_21138693.1| Peptide chain release factor 2 [Rhodococcus sp. AW25M09]
gi|443413822|emb|CCQ17031.1| Peptide chain release factor 2 [Rhodococcus sp. AW25M09]
Length = 370
Score = 41.6 bits (96), Expect = 0.069, Method: Composition-based stats.
Identities = 19/36 (52%), Positives = 25/36 (69%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+I E D++ R SGPGGQ+V T++ V LTHIPT
Sbjct: 234 EIPEGDVRVDVYRSSGPGGQSVNTTDSAVRLTHIPT 269
>gi|426375274|ref|XP_004054469.1| PREDICTED: peptide chain release factor 1, mitochondrial [Gorilla
gorilla gorilla]
Length = 445
Score = 41.6 bits (96), Expect = 0.069, Method: Composition-based stats.
Identities = 19/36 (52%), Positives = 24/36 (66%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
K+D KD++ R GPGGQ V KT++ V L HIPT
Sbjct: 294 KLDPKDLRIDTFRAKGPGGQHVNKTDSAVRLVHIPT 329
>gi|394987702|ref|ZP_10380541.1| peptide chain release factor 2 [Sulfuricella denitrificans skB26]
gi|393792921|dbj|GAB70180.1| peptide chain release factor 2 [Sulfuricella denitrificans skB26]
Length = 376
Score = 41.6 bits (96), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTD 63
RRH S SS+F ++D S +I+ D++ R SG GGQ + KT++ + +TH+PT+
Sbjct: 222 RRHTSF-SSVFIYPEVDDSIEVEINPADLRIDTFRASGAGGQHINKTDSAIRITHLPTN 279
>gi|366086467|ref|ZP_09452952.1| peptide chain release factor 2 [Lactobacillus zeae KCTC 3804]
Length = 332
Score = 41.6 bits (96), Expect = 0.069, Method: Composition-based stats.
Identities = 25/58 (43%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S AS +LD S I +D++ R SG GGQ + KT++ V L HIPT
Sbjct: 172 RRHTSFASVDVMP-ELDNSIQVDIRPEDVKMEVFRSSGAGGQHINKTSSAVRLIHIPT 228
>gi|365539549|ref|ZP_09364724.1| peptide Chain Release factor [Vibrio ordalii ATCC 33509]
Length = 248
Score = 41.6 bits (96), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTDS 64
RRH S AS+ F ++D + I+ D++ R SG GGQ V T + V +THIPT++
Sbjct: 95 RRHTSFASA-FIYPEIDENIAIDINPADLRIDVYRASGAGGQHVNTTESAVRITHIPTNT 153
>gi|317133128|ref|YP_004092442.1| peptide chain release factor 2 [Ethanoligenens harbinense YUAN-3]
gi|315471107|gb|ADU27711.1| peptide chain release factor 2 [Ethanoligenens harbinense YUAN-3]
Length = 377
Score = 41.6 bits (96), Expect = 0.069, Method: Composition-based stats.
Identities = 25/58 (43%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S AS ++D S I +DI+ R SG GGQ + KT++ V LTH+PT
Sbjct: 215 RRHTSFASVEVMP-EIDDSIEVDIRPEDIKMDVFRSSGAGGQHINKTSSAVRLTHLPT 271
>gi|237755833|ref|ZP_04584431.1| peptide chain release factor 2 [Sulfurihydrogenibium yellowstonense
SS-5]
gi|237691998|gb|EEP61008.1| peptide chain release factor 2 [Sulfurihydrogenibium yellowstonense
SS-5]
Length = 369
Score = 41.6 bits (96), Expect = 0.069, Method: Composition-based stats.
Identities = 27/59 (45%), Positives = 37/59 (62%), Gaps = 3/59 (5%)
Query: 5 RRHLSL-ASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S A S+ + D D KV +I+E+D++ R G GGQ V KT++ V +THIPT
Sbjct: 211 RRHTSFSAVSVIPEIDEDI-KV-EINEEDLRIDTYRAGGAGGQHVNKTDSAVRITHIPT 267
>gi|315655086|ref|ZP_07907988.1| peptide chain release factor RF2 [Mobiluncus curtisii ATCC 51333]
gi|315490567|gb|EFU80190.1| peptide chain release factor RF2 [Mobiluncus curtisii ATCC 51333]
Length = 376
Score = 41.6 bits (96), Expect = 0.070, Method: Composition-based stats.
Identities = 21/42 (50%), Positives = 28/42 (66%), Gaps = 3/42 (7%)
Query: 21 DYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
D+ +VP E DI+ R SGPGGQ+V T++ V LTH+PT
Sbjct: 233 DHIEVP---ESDIKIDVFRSSGPGGQSVNTTDSAVRLTHLPT 271
>gi|218133361|ref|ZP_03462165.1| hypothetical protein BACPEC_01226 [[Bacteroides] pectinophilus ATCC
43243]
gi|217992234|gb|EEC58238.1| peptide chain release factor 1 [[Bacteroides] pectinophilus ATCC
43243]
Length = 363
Score = 41.6 bits (96), Expect = 0.070, Method: Composition-based stats.
Identities = 20/36 (55%), Positives = 25/36 (69%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+IDEKDI+ +R SG GGQ V T++ V LTH PT
Sbjct: 220 QIDEKDIRIDVMRASGNGGQCVNTTDSAVRLTHYPT 255
>gi|440232230|ref|YP_007346023.1| bacterial peptide chain release factor 2 (bRF-2) [Serratia
marcescens FGI94]
gi|440053935|gb|AGB83838.1| bacterial peptide chain release factor 2 (bRF-2) [Serratia
marcescens FGI94]
Length = 365
Score = 41.2 bits (95), Expect = 0.071, Method: Composition-based stats.
Identities = 24/59 (40%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTD 63
RRH S SS+F ++D + +I+ D++ R SG GGQ V KT + V +TH+PT+
Sbjct: 212 RRHTSF-SSVFVYPEVDDNIDIEINPADLRIDVYRASGAGGQHVNKTESAVRITHLPTN 269
>gi|365886879|ref|ZP_09425776.1| Peptide chain release factor 2 (RF-2) [Bradyrhizobium sp. STM 3809]
gi|365337572|emb|CCD98307.1| Peptide chain release factor 2 (RF-2) [Bradyrhizobium sp. STM 3809]
Length = 323
Score = 41.2 bits (95), Expect = 0.071, Method: Composition-based stats.
Identities = 27/59 (45%), Positives = 34/59 (57%), Gaps = 3/59 (5%)
Query: 5 RRHLSLAS-SLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S +S +F D D K+ I E D++ +R G GGQ V KT + V LTHIPT
Sbjct: 156 RRHTSFSSVQIFPVID-DSIKI-DIKESDVRVDTMRSGGAGGQHVNKTESAVRLTHIPT 212
>gi|297171663|gb|ADI22657.1| protein chain release factor B [uncultured Gemmatimonadales
bacterium HF0500_22O06]
Length = 356
Score = 41.2 bits (95), Expect = 0.071, Method: Composition-based stats.
Identities = 25/58 (43%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S AS D ++ IDE D++ R SG GGQ V KT++ V +TH PT
Sbjct: 197 RRHTSFASVFIYPLVEDGIEI-DIDESDLRIDTYRASGAGGQHVNKTDSAVRITHEPT 253
>gi|296136248|ref|YP_003643490.1| hypothetical protein Tint_1790 [Thiomonas intermedia K12]
gi|295796370|gb|ADG31160.1| conserved hypothetical protein [Thiomonas intermedia K12]
Length = 367
Score = 41.2 bits (95), Expect = 0.071, Method: Composition-based stats.
Identities = 24/57 (42%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 6 RHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RH S AS +F ++D S I+ D++ R SG GGQ + KT++ V LTH+PT
Sbjct: 215 RHTSFAS-VFVYPEVDDSIEIDINPADVRTDTFRASGAGGQHINKTDSAVRLTHMPT 270
>gi|254372144|ref|ZP_04987636.1| peptide chain release factor 2 [Francisella tularensis subsp.
novicida GA99-3549]
gi|151569874|gb|EDN35528.1| peptide chain release factor 2 [Francisella novicida GA99-3549]
Length = 325
Score = 41.2 bits (95), Expect = 0.071, Method: Composition-based stats.
Identities = 24/59 (40%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTD 63
+RH S AS +F ++D +I+ D++ R SG GGQ V KT++ V +THIPT+
Sbjct: 172 KRHTSFAS-VFISPEVDDDIDIEINPADLRVDTYRASGAGGQHVNKTDSAVRITHIPTN 229
>gi|167646537|ref|YP_001684200.1| peptide chain release factor 2 [Caulobacter sp. K31]
gi|189039999|sp|B0SXB7.1|RF2_CAUSK RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|167348967|gb|ABZ71702.1| peptide chain release factor 2 [Caulobacter sp. K31]
Length = 367
Score = 41.2 bits (95), Expect = 0.071, Method: Composition-based stats.
Identities = 23/58 (39%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+RH S AS+ D ++ I+ D++ R SG GGQ + KT++ V LTHIPT
Sbjct: 207 KRHTSFASAWVYPVVDDTIEI-DINPSDVRTDTYRASGAGGQHINKTDSAVRLTHIPT 263
>gi|392415431|ref|YP_006452036.1| bacterial peptide chain release factor 2 (bRF-2) [Mycobacterium
chubuense NBB4]
gi|390615207|gb|AFM16357.1| bacterial peptide chain release factor 2 (bRF-2) [Mycobacterium
chubuense NBB4]
Length = 372
Score = 41.2 bits (95), Expect = 0.071, Method: Composition-based stats.
Identities = 19/35 (54%), Positives = 24/35 (68%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
I E D++ R SGPGGQ+V T++ V LTHIPT
Sbjct: 235 IPESDVRVDVYRSSGPGGQSVNTTDSAVRLTHIPT 269
>gi|385792095|ref|YP_005825071.1| hypothetical protein [Francisella cf. novicida Fx1]
gi|328676241|gb|AEB27111.1| Peptide chain release factor 2 [Francisella cf. novicida Fx1]
Length = 325
Score = 41.2 bits (95), Expect = 0.071, Method: Composition-based stats.
Identities = 24/59 (40%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTD 63
+RH S AS +F ++D +I+ D++ R SG GGQ V KT++ V +THIPT+
Sbjct: 172 KRHTSFAS-VFISPEVDDDIDIEINPADLRVDTYRASGAGGQHVNKTDSAVRITHIPTN 229
>gi|208780604|ref|ZP_03247943.1| peptide chain release factor 2 [Francisella novicida FTG]
gi|254373627|ref|ZP_04989111.1| peptide chain release factor 2 [Francisella novicida GA99-3548]
gi|151571349|gb|EDN37003.1| peptide chain release factor 2 [Francisella novicida GA99-3548]
gi|208743579|gb|EDZ89884.1| peptide chain release factor 2 [Francisella novicida FTG]
Length = 325
Score = 41.2 bits (95), Expect = 0.071, Method: Composition-based stats.
Identities = 24/59 (40%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTD 63
+RH S AS +F ++D +I+ D++ R SG GGQ V KT++ V +THIPT+
Sbjct: 172 KRHTSFAS-VFISPEVDDDIDIEINPADLRVDTYRASGAGGQHVNKTDSAVRITHIPTN 229
>gi|149374726|ref|ZP_01892500.1| peptide chain release factor 2 [Marinobacter algicola DG893]
gi|149361429|gb|EDM49879.1| peptide chain release factor 2 [Marinobacter algicola DG893]
Length = 351
Score = 41.2 bits (95), Expect = 0.071, Method: Composition-based stats.
Identities = 25/58 (43%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S SS+F ++D S +I+ D++ R SG GGQ V +T + V LTH PT
Sbjct: 198 RRHTSF-SSVFVSPEVDDSFEIEINPADLRVDVYRASGAGGQHVNRTESAVRLTHNPT 254
>gi|118496781|ref|YP_897831.1| peptide chain release factor 2 [Francisella novicida U112]
gi|194324538|ref|ZP_03058310.1| peptide chain release factor 2 [Francisella novicida FTE]
gi|118422687|gb|ABK89077.1| peptide chain release factor 2 [Francisella novicida U112]
gi|194321373|gb|EDX18859.1| peptide chain release factor 2 [Francisella tularensis subsp.
novicida FTE]
Length = 325
Score = 41.2 bits (95), Expect = 0.071, Method: Composition-based stats.
Identities = 24/59 (40%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTD 63
+RH S AS +F ++D +I+ D++ R SG GGQ V KT++ V +THIPT+
Sbjct: 172 KRHTSFAS-VFISPEVDDDIDIEINPADLRVDTYRASGAGGQHVNKTDSAVRITHIPTN 229
>gi|403174865|ref|XP_003333780.2| hypothetical protein PGTG_15540 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375171351|gb|EFP89361.2| hypothetical protein PGTG_15540 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 308
Score = 41.2 bits (95), Expect = 0.072, Method: Composition-based stats.
Identities = 20/36 (55%), Positives = 24/36 (66%)
Query: 29 DEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTDS 64
DEKDI+ +R G GGQ V KT + V LTHIPT +
Sbjct: 158 DEKDIKLETMRSQGAGGQHVNKTESAVRLTHIPTGT 193
>gi|315657060|ref|ZP_07909945.1| peptide chain release factor RF2 [Mobiluncus curtisii subsp.
holmesii ATCC 35242]
gi|315492452|gb|EFU82058.1| peptide chain release factor RF2 [Mobiluncus curtisii subsp.
holmesii ATCC 35242]
Length = 376
Score = 41.2 bits (95), Expect = 0.072, Method: Composition-based stats.
Identities = 21/42 (50%), Positives = 28/42 (66%), Gaps = 3/42 (7%)
Query: 21 DYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
D+ +VP E DI+ R SGPGGQ+V T++ V LTH+PT
Sbjct: 233 DHIEVP---ESDIKIDVFRSSGPGGQSVNTTDSAVRLTHLPT 271
>gi|260438934|ref|ZP_05792750.1| peptide chain release factor 1 [Butyrivibrio crossotus DSM 2876]
gi|292808585|gb|EFF67790.1| peptide chain release factor 1 [Butyrivibrio crossotus DSM 2876]
Length = 358
Score = 41.2 bits (95), Expect = 0.072, Method: Composition-based stats.
Identities = 20/36 (55%), Positives = 25/36 (69%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+IDEKDI+ +R SG GGQ V T++ V LTH PT
Sbjct: 214 QIDEKDIRIDVMRASGNGGQCVNTTDSAVRLTHYPT 249
>gi|395773704|ref|ZP_10454219.1| peptide chain release factor 2 [Streptomyces acidiscabies 84-104]
Length = 368
Score = 41.2 bits (95), Expect = 0.073, Method: Composition-based stats.
Identities = 18/36 (50%), Positives = 25/36 (69%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+IDE +++ R SGPGGQ V T++ V LTH+PT
Sbjct: 232 EIDESELRVDVYRSSGPGGQGVNTTDSAVRLTHLPT 267
>gi|380512649|ref|ZP_09856056.1| peptide chain release factor 2 [Xanthomonas sacchari NCPPB 4393]
Length = 302
Score = 41.2 bits (95), Expect = 0.073, Method: Composition-based stats.
Identities = 23/58 (39%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S +S+F ++D + I+ D++ R SG GGQ V KT + V +TH+PT
Sbjct: 140 RRHTSF-TSVFVSPEVDDNIDIDINPADLKTDVYRSSGAGGQHVNKTESAVRITHVPT 196
>gi|385330508|ref|YP_005884459.1| peptide chain release factor 2 [Marinobacter adhaerens HP15]
gi|311693658|gb|ADP96531.1| peptide chain release factor 2 [Marinobacter adhaerens HP15]
Length = 351
Score = 41.2 bits (95), Expect = 0.073, Method: Composition-based stats.
Identities = 25/58 (43%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S SS+F ++D S +I+ D++ R SG GGQ V +T + V LTH PT
Sbjct: 198 RRHTSF-SSVFVSPEVDDSFEIEINPADLRVDVYRASGAGGQHVNRTESAVRLTHNPT 254
>gi|390630292|ref|ZP_10258277.1| Peptide chain release factor 2 [Weissella confusa LBAE C39-2]
gi|390484411|emb|CCF30625.1| Peptide chain release factor 2 [Weissella confusa LBAE C39-2]
Length = 371
Score = 41.2 bits (95), Expect = 0.074, Method: Composition-based stats.
Identities = 25/58 (43%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S S + +LD S I+ D++ R SG GGQ + KT++ V LTHIPT
Sbjct: 211 RRHTSFVS-IDVMPELDDSVEVDINPADVKMDVYRASGAGGQHINKTSSAVRLTHIPT 267
>gi|304389757|ref|ZP_07371716.1| peptide chain release factor RF2 [Mobiluncus curtisii subsp.
curtisii ATCC 35241]
gi|304326933|gb|EFL94172.1| peptide chain release factor RF2 [Mobiluncus curtisii subsp.
curtisii ATCC 35241]
Length = 376
Score = 41.2 bits (95), Expect = 0.074, Method: Composition-based stats.
Identities = 21/42 (50%), Positives = 28/42 (66%), Gaps = 3/42 (7%)
Query: 21 DYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
D+ +VP E DI+ R SGPGGQ+V T++ V LTH+PT
Sbjct: 233 DHIEVP---ESDIKIDVFRSSGPGGQSVNTTDSAVRLTHLPT 271
>gi|433646380|ref|YP_007291382.1| bacterial peptide chain release factor 2 (bRF-2) [Mycobacterium
smegmatis JS623]
gi|433296157|gb|AGB21977.1| bacterial peptide chain release factor 2 (bRF-2) [Mycobacterium
smegmatis JS623]
Length = 368
Score = 41.2 bits (95), Expect = 0.074, Method: Composition-based stats.
Identities = 19/35 (54%), Positives = 24/35 (68%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
I E D++ R SGPGGQ+V T++ V LTHIPT
Sbjct: 232 IPESDVRVDVYRSSGPGGQSVNTTDSAVRLTHIPT 266
>gi|375335765|ref|ZP_09777109.1| peptide chain release factor 2 [Succinivibrionaceae bacterium WG-1]
Length = 248
Score = 41.2 bits (95), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S S+ F D+D I+ D++ R SG GGQ + KT++ V +THIPT
Sbjct: 95 RRHTSFCSA-FVYPDVDEHIEVTINPADLRIDIYRASGAGGQHINKTDSAVRITHIPT 151
>gi|166032746|ref|ZP_02235575.1| hypothetical protein DORFOR_02461 [Dorea formicigenerans ATCC
27755]
gi|346306711|ref|ZP_08848865.1| peptide chain release factor 1 [Dorea formicigenerans 4_6_53AFAA]
gi|166027103|gb|EDR45860.1| peptide chain release factor 1 [Dorea formicigenerans ATCC 27755]
gi|345908069|gb|EGX77737.1| peptide chain release factor 1 [Dorea formicigenerans 4_6_53AFAA]
Length = 376
Score = 41.2 bits (95), Expect = 0.074, Method: Composition-based stats.
Identities = 20/35 (57%), Positives = 24/35 (68%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
IDEKDI+ +R SG GGQ V T++ V LTH PT
Sbjct: 235 IDEKDIRIDVMRASGNGGQCVNTTDSAVRLTHYPT 269
>gi|88856358|ref|ZP_01131017.1| peptide chain release factor 2 [marine actinobacterium PHSC20C1]
gi|88814442|gb|EAR24305.1| peptide chain release factor 2 [marine actinobacterium PHSC20C1]
Length = 368
Score = 41.2 bits (95), Expect = 0.074, Method: Composition-based stats.
Identities = 18/43 (41%), Positives = 29/43 (67%)
Query: 20 LDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
++ + V ++ E DI+ R SGPGGQ+V T++ V +TH+PT
Sbjct: 225 IETTDVVEVPENDIRVDVFRSSGPGGQSVNTTDSAVRITHLPT 267
>gi|52425247|ref|YP_088384.1| peptide chain release factor 1 [Mannheimia succiniciproducens
MBEL55E]
gi|61214602|sp|Q65TB1.1|RF1_MANSM RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|52307299|gb|AAU37799.1| PrfA protein [Mannheimia succiniciproducens MBEL55E]
Length = 360
Score = 41.2 bits (95), Expect = 0.075, Method: Composition-based stats.
Identities = 19/44 (43%), Positives = 30/44 (68%)
Query: 19 DLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+L S++P+I+ D++ R SG GGQ + KT++ V +THIPT
Sbjct: 208 ELPESEMPEINPADLRIDTYRASGAGGQHINKTDSAVRITHIPT 251
>gi|400977221|ref|ZP_10804452.1| chain release factor 2 [Salinibacterium sp. PAMC 21357]
Length = 368
Score = 41.2 bits (95), Expect = 0.075, Method: Composition-based stats.
Identities = 18/43 (41%), Positives = 29/43 (67%)
Query: 20 LDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
++ + V ++ E DI+ R SGPGGQ+V T++ V +TH+PT
Sbjct: 225 IETTDVVEVPENDIRVDVFRSSGPGGQSVNTTDSAVRITHLPT 267
>gi|328852030|gb|EGG01179.1| hypothetical protein MELLADRAFT_92698 [Melampsora larici-populina
98AG31]
Length = 177
Score = 41.2 bits (95), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 27/43 (62%), Gaps = 2/43 (4%)
Query: 6 RHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAV 48
R + SSLF L K+ K++E D+ E FVRGSGPGGQ +
Sbjct: 18 RSIQTTSSLFLPSKL--PKIQKLNESDLIEEFVRGSGPGGQCI 58
>gi|422320027|ref|ZP_16401095.1| peptide chain release factor 2 [Achromobacter xylosoxidans C54]
gi|317405230|gb|EFV85568.1| peptide chain release factor 2 [Achromobacter xylosoxidans C54]
Length = 386
Score = 41.2 bits (95), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 6 RHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RH S AS +F ++D S +++ D++ R SG GGQ + KT++ V LTHIPT
Sbjct: 234 RHTSFAS-VFVYPEVDDSFEVEVNPADLRVDTYRASGAGGQHINKTDSAVRLTHIPT 289
>gi|336177179|ref|YP_004582554.1| peptide chain release factor 2 [Frankia symbiont of Datisca
glomerata]
gi|334858159|gb|AEH08633.1| Peptide chain release factor 2 [Frankia symbiont of Datisca
glomerata]
Length = 366
Score = 41.2 bits (95), Expect = 0.075, Method: Composition-based stats.
Identities = 17/37 (45%), Positives = 27/37 (72%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTD 63
+ID+K+++ R SGPGGQ V T++ V +TH+PT+
Sbjct: 227 EIDDKELRIDIFRSSGPGGQGVNTTDSAVRITHLPTN 263
>gi|429768972|ref|ZP_19301100.1| peptide chain release factor 2 [Brevundimonas diminuta 470-4]
gi|429188323|gb|EKY29211.1| peptide chain release factor 2 [Brevundimonas diminuta 470-4]
Length = 300
Score = 41.2 bits (95), Expect = 0.075, Method: Composition-based stats.
Identities = 25/60 (41%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTDS 64
+RH S AS +D S I+ D++ R SG GGQ V KT++ V LTHIPT++
Sbjct: 140 KRHTSFASIGVSPV-VDDSIEIDINPSDVRTDTYRASGAGGQHVNKTDSAVRLTHIPTNT 198
>gi|383643884|ref|ZP_09956290.1| peptide chain release factor 2 [Streptomyces chartreusis NRRL
12338]
Length = 368
Score = 41.2 bits (95), Expect = 0.075, Method: Composition-based stats.
Identities = 18/35 (51%), Positives = 24/35 (68%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
IDE +++ R SGPGGQ V T++ V +THIPT
Sbjct: 233 IDESELRVDVYRSSGPGGQGVNTTDSAVRITHIPT 267
>gi|354594597|ref|ZP_09012636.1| peptide chain release factor 2 [Commensalibacter intestini A911]
gi|353672273|gb|EHD13973.1| peptide chain release factor 2 [Commensalibacter intestini A911]
Length = 348
Score = 41.2 bits (95), Expect = 0.075, Method: Composition-based stats.
Identities = 23/58 (39%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S AS +D S I+E D++ R SG GGQ + KT + + +TH+PT
Sbjct: 182 RRHTSFASVWVYPV-IDDSIQIDINESDLKVDTYRASGAGGQHINKTESAIRITHVPT 238
>gi|332878808|ref|ZP_08446523.1| putative peptide chain release factor H [Capnocytophaga sp. oral
taxon 329 str. F0087]
gi|332683159|gb|EGJ56041.1| putative peptide chain release factor H [Capnocytophaga sp. oral
taxon 329 str. F0087]
Length = 235
Score = 41.2 bits (95), Expect = 0.075, Method: Composition-based stats.
Identities = 21/61 (34%), Positives = 32/61 (52%)
Query: 2 SIFRRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIP 61
S FR+ ++ ++LD + E+D+Q + R G GGQ V K N+ V TH+P
Sbjct: 82 STFRKFHQRSNWYIGVFELDQLQRQSFSERDVQFQTTRSQGNGGQNVNKVNSAVRATHLP 141
Query: 62 T 62
T
Sbjct: 142 T 142
>gi|145485050|ref|XP_001428534.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124395620|emb|CAK61136.1| unnamed protein product [Paramecium tetraurelia]
Length = 390
Score = 41.2 bits (95), Expect = 0.076, Method: Composition-based stats.
Identities = 16/35 (45%), Positives = 25/35 (71%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+ +KD++ ++R SGPGGQ V KT + +TH+PT
Sbjct: 240 LSDKDLRYEYMRASGPGGQHVNKTESACRITHVPT 274
>gi|50287521|ref|XP_446190.1| hypothetical protein [Candida glabrata CBS 138]
gi|49525497|emb|CAG59114.1| unnamed protein product [Candida glabrata]
Length = 187
Score = 41.2 bits (95), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 29/42 (69%), Gaps = 4/42 (9%)
Query: 26 PKID---EKDIQERFVRG-SGPGGQAVAKTNNCVVLTHIPTD 63
PK D E DI+E+F+ G +GPGGQ + K N+ V + H+P++
Sbjct: 41 PKFDASMEADIEEKFLHGGTGPGGQKINKCNSKVQIKHVPSN 82
>gi|386386064|ref|ZP_10071263.1| peptide chain release factor 2 [Streptomyces tsukubaensis
NRRL18488]
gi|385666472|gb|EIF90016.1| peptide chain release factor 2 [Streptomyces tsukubaensis
NRRL18488]
Length = 368
Score = 41.2 bits (95), Expect = 0.077, Method: Composition-based stats.
Identities = 18/36 (50%), Positives = 25/36 (69%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+IDE +++ R SGPGGQ V T++ V +THIPT
Sbjct: 232 EIDESELRIDVYRASGPGGQGVNTTDSAVRITHIPT 267
>gi|357973917|ref|ZP_09137888.1| peptide chain release factor 1 [Sphingomonas sp. KC8]
Length = 361
Score = 41.2 bits (95), Expect = 0.077, Method: Composition-based stats.
Identities = 17/36 (47%), Positives = 27/36 (75%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+ID+KD++ R SGPGGQ+V T++ V +TH+P+
Sbjct: 217 QIDDKDLRIDVYRSSGPGGQSVNTTDSAVRITHLPS 252
>gi|345452686|gb|AEN94556.1| peptide chain release factor 2 beta subunit [Francisella
halioticida]
Length = 325
Score = 41.2 bits (95), Expect = 0.077, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTDS 64
+RH S AS +F ++D + +I+ D++ R SG GGQ V KT++ V +TH+PT++
Sbjct: 172 KRHTSFAS-VFISPEVDDNIDIEINPADLRIDTYRASGAGGQHVNKTDSAVRITHVPTNT 230
>gi|262370876|ref|ZP_06064200.1| peptide chain release factor 2 [Acinetobacter johnsonii SH046]
gi|262314238|gb|EEY95281.1| peptide chain release factor 2 [Acinetobacter johnsonii SH046]
Length = 310
Score = 41.2 bits (95), Expect = 0.077, Method: Composition-based stats.
Identities = 23/58 (39%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S S++F ++D + I+ D++ R SG GGQ + KT++ V LTH PT
Sbjct: 157 RRHTSF-SAVFVSPEVDDNIEIDINPSDVRTDTYRASGAGGQHINKTDSAVRLTHAPT 213
>gi|241895046|ref|ZP_04782342.1| peptide chain release factor 2 [Weissella paramesenteroides ATCC
33313]
gi|241871764|gb|EER75515.1| peptide chain release factor 2 [Weissella paramesenteroides ATCC
33313]
Length = 396
Score = 41.2 bits (95), Expect = 0.077, Method: Composition-based stats.
Identities = 25/58 (43%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S S + +LD S I+ D++ R SG GGQ + KT++ V LTHIPT
Sbjct: 236 RRHTSFVS-IDVMPELDDSVEVDINPADVKMDVYRASGAGGQHINKTSSAVRLTHIPT 292
>gi|120402908|ref|YP_952737.1| peptide chain release factor 2 [Mycobacterium vanbaalenii PYR-1]
gi|166225112|sp|A1T6D1.1|RF2_MYCVP RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|119955726|gb|ABM12731.1| bacterial peptide chain release factor 2 (bRF-2) [Mycobacterium
vanbaalenii PYR-1]
Length = 368
Score = 41.2 bits (95), Expect = 0.077, Method: Composition-based stats.
Identities = 19/36 (52%), Positives = 25/36 (69%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+I E D++ R SGPGGQ+V T++ V LTHIPT
Sbjct: 231 EIPEGDVRVDVYRSSGPGGQSVNTTDSAVRLTHIPT 266
>gi|238787318|ref|ZP_04631117.1| Peptide chain release factor 2 [Yersinia frederiksenii ATCC 33641]
gi|238724580|gb|EEQ16221.1| Peptide chain release factor 2 [Yersinia frederiksenii ATCC 33641]
Length = 347
Score = 41.2 bits (95), Expect = 0.077, Method: Composition-based stats.
Identities = 25/59 (42%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTD 63
RRH S SS F ++D +I+ D++ R SG GGQ V KT + V +THIPT+
Sbjct: 194 RRHTSF-SSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQHVNKTESAVRITHIPTN 251
>gi|269469023|gb|EEZ80587.1| protein chain release factor B [uncultured SUP05 cluster bacterium]
Length = 364
Score = 41.2 bits (95), Expect = 0.077, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTDS 64
+RH S SS+F ++D + I+ D++ R SG GGQ V KT + V +TH+PT++
Sbjct: 211 KRHTSF-SSVFVSPEIDDNIEININPSDLRIDTYRASGAGGQHVNKTESAVRITHLPTNT 269
>gi|298346504|ref|YP_003719191.1| peptide subunit release factor RF2 [Mobiluncus curtisii ATCC 43063]
gi|298236565|gb|ADI67697.1| peptide chain release factor RF2 [Mobiluncus curtisii ATCC 43063]
Length = 376
Score = 41.2 bits (95), Expect = 0.077, Method: Composition-based stats.
Identities = 21/42 (50%), Positives = 28/42 (66%), Gaps = 3/42 (7%)
Query: 21 DYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
D+ +VP E DI+ R SGPGGQ+V T++ V LTH+PT
Sbjct: 233 DHIEVP---ESDIKIDVFRSSGPGGQSVNTTDSAVRLTHLPT 271
>gi|212710038|ref|ZP_03318166.1| hypothetical protein PROVALCAL_01091 [Providencia alcalifaciens DSM
30120]
gi|212687245|gb|EEB46773.1| hypothetical protein PROVALCAL_01091 [Providencia alcalifaciens DSM
30120]
Length = 329
Score = 41.2 bits (95), Expect = 0.077, Method: Composition-based stats.
Identities = 25/59 (42%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTD 63
RRH S SS F ++D +I+ D++ R SG GGQ V KT + V +THIPT+
Sbjct: 176 RRHTSF-SSAFIYPEVDDDIDIEINPADLRIDVYRASGAGGQHVNKTESAVRITHIPTN 233
>gi|357389817|ref|YP_004904657.1| putative peptide chain release factor 2 [Kitasatospora setae
KM-6054]
gi|311896293|dbj|BAJ28701.1| putative peptide chain release factor 2 [Kitasatospora setae
KM-6054]
Length = 351
Score = 41.2 bits (95), Expect = 0.078, Method: Composition-based stats.
Identities = 18/35 (51%), Positives = 24/35 (68%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
IDE D++ R SGPGGQ V T++ V +TH+PT
Sbjct: 217 IDEGDLRIDVYRASGPGGQGVNTTDSAVRITHLPT 251
>gi|187932243|ref|YP_001892228.1| peptide chain release factor 2 [Francisella tularensis subsp.
mediasiatica FSC147]
gi|187713152|gb|ACD31449.1| peptide chain release factor 2 [Francisella tularensis subsp.
mediasiatica FSC147]
Length = 325
Score = 41.2 bits (95), Expect = 0.078, Method: Composition-based stats.
Identities = 24/59 (40%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTD 63
+RH S AS +F ++D +I+ D++ R SG GGQ V KT++ V +THIPT+
Sbjct: 172 KRHTSFAS-VFISPEVDDDIDIEINPTDLRVDTYRASGAGGQHVNKTDSAVRITHIPTN 229
>gi|167750196|ref|ZP_02422323.1| hypothetical protein EUBSIR_01170 [Eubacterium siraeum DSM 15702]
gi|167656758|gb|EDS00888.1| peptide chain release factor 2 [Eubacterium siraeum DSM 15702]
gi|291556130|emb|CBL33247.1| bacterial peptide chain release factor 2 (bRF-2) [Eubacterium
siraeum V10Sc8a]
Length = 370
Score = 41.2 bits (95), Expect = 0.078, Method: Composition-based stats.
Identities = 26/61 (42%), Positives = 33/61 (54%), Gaps = 7/61 (11%)
Query: 5 RRHLSLASSLFR---KYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIP 61
RRH S AS D+D +I E +I+ R SG GGQ V KT++ V +THIP
Sbjct: 212 RRHTSFASVEVMPEINEDIDI----EISEDEIKMDVYRASGAGGQKVNKTSSAVRITHIP 267
Query: 62 T 62
T
Sbjct: 268 T 268
>gi|120555185|ref|YP_959536.1| peptide chain release factor 2 [Marinobacter aquaeolei VT8]
gi|387813369|ref|YP_005428851.1| peptide chain release factor 2 [Marinobacter hydrocarbonoclasticus
ATCC 49840]
gi|120325034|gb|ABM19349.1| bacterial peptide chain release factor 2 (bRF-2) [Marinobacter
aquaeolei VT8]
gi|381338381|emb|CCG94428.1| peptide chain release factor RF-2 [Marinobacter
hydrocarbonoclasticus ATCC 49840]
Length = 310
Score = 41.2 bits (95), Expect = 0.078, Method: Composition-based stats.
Identities = 25/58 (43%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S SS+F ++D S +I+ D++ R SG GGQ V +T + V LTH PT
Sbjct: 157 RRHTSF-SSVFVSPEVDDSFEIEINPADLRVDVYRASGAGGQHVNRTESAVRLTHNPT 213
>gi|387130322|ref|YP_006293212.1| peptide chain release factor 2 [Methylophaga sp. JAM7]
gi|386271611|gb|AFJ02525.1| Peptide chain release factor 2 [Methylophaga sp. JAM7]
Length = 348
Score = 41.2 bits (95), Expect = 0.079, Method: Composition-based stats.
Identities = 24/60 (40%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTDS 64
RRH S AS +F ++D + I+ D++ R SG GGQ V T++ V +THIPT++
Sbjct: 195 RRHTSFAS-VFVYPEVDDTIEIDINPADLRVDTYRSSGAGGQHVNTTDSAVRITHIPTNT 253
>gi|423018559|ref|ZP_17009280.1| peptide chain release factor 2 [Achromobacter xylosoxidans AXX-A]
gi|338778321|gb|EGP42796.1| peptide chain release factor 2 [Achromobacter xylosoxidans AXX-A]
Length = 248
Score = 41.2 bits (95), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 6 RHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RH S AS +F ++D S +++ D++ R SG GGQ + KT++ V LTHIPT
Sbjct: 96 RHTSFAS-VFVYPEVDDSFEVEVNPADLRVDTYRASGAGGQHINKTDSAVRLTHIPT 151
>gi|292487146|ref|YP_003530016.1| peptide chain release factor 1 [Erwinia amylovora CFBP1430]
gi|428784074|ref|ZP_19001567.1| Peptide chain release factor 1 (RF-1) [Erwinia amylovora ACW56400]
gi|291552563|emb|CBA19608.1| Peptide chain release factor 1 (RF-1) [Erwinia amylovora CFBP1430]
gi|312171251|emb|CBX79510.1| Peptide chain release factor 1 (RF-1) [Erwinia amylovora ATCC
BAA-2158]
gi|426277789|gb|EKV55514.1| Peptide chain release factor 1 (RF-1) [Erwinia amylovora ACW56400]
Length = 332
Score = 41.2 bits (95), Expect = 0.079, Method: Composition-based stats.
Identities = 24/59 (40%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTD 63
RRH S SS+F ++D + +I+ D++ R SG GGQ V KT + V +TH+PT+
Sbjct: 179 RRHTSF-SSVFIYPEVDDNIDIEINPADLRIDVYRASGAGGQHVNKTESAVRITHLPTN 236
>gi|291531340|emb|CBK96925.1| bacterial peptide chain release factor 2 (bRF-2) [Eubacterium
siraeum 70/3]
Length = 370
Score = 41.2 bits (95), Expect = 0.079, Method: Composition-based stats.
Identities = 26/61 (42%), Positives = 33/61 (54%), Gaps = 7/61 (11%)
Query: 5 RRHLSLASSLFR---KYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIP 61
RRH S AS D+D +I E +I+ R SG GGQ V KT++ V +THIP
Sbjct: 212 RRHTSFASVEVMPEINEDIDI----EISEDEIKMDVYRASGAGGQKVNKTSSAVRITHIP 267
Query: 62 T 62
T
Sbjct: 268 T 268
>gi|336314940|ref|ZP_08569854.1| peptide chain release factor 2 [Rheinheimera sp. A13L]
gi|335880767|gb|EGM78652.1| peptide chain release factor 2 [Rheinheimera sp. A13L]
Length = 320
Score = 41.2 bits (95), Expect = 0.079, Method: Composition-based stats.
Identities = 23/59 (38%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTD 63
RRH S AS +F ++D +I+ D++ R SG GGQ V +T++ V +TH+PT+
Sbjct: 167 RRHTSFAS-VFVAPEVDDDIEIEINPADLRIDTYRASGAGGQHVNRTDSAVRITHLPTN 224
>gi|320540119|ref|ZP_08039774.1| peptide chain release factor RF-2 [Serratia symbiotica str. Tucson]
gi|320029785|gb|EFW11809.1| peptide chain release factor RF-2 [Serratia symbiotica str. Tucson]
Length = 325
Score = 41.2 bits (95), Expect = 0.079, Method: Composition-based stats.
Identities = 24/59 (40%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTD 63
RRH S SS+F ++D +I+ D++ R SG GGQ V KT + V +TH+PT+
Sbjct: 172 RRHTSF-SSVFIYPEVDDDIDMEINPADLRIDVYRASGAGGQHVNKTESAVRITHLPTN 229
>gi|385787269|ref|YP_005818378.1| peptide chain release factor 2 [Erwinia sp. Ejp617]
gi|310766541|gb|ADP11491.1| peptide chain release factor 2 [Erwinia sp. Ejp617]
Length = 300
Score = 41.2 bits (95), Expect = 0.079, Method: Composition-based stats.
Identities = 24/59 (40%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTD 63
RRH S SS+F ++D + +I+ D++ R SG GGQ V KT + V +TH+PT+
Sbjct: 147 RRHTSF-SSVFIYPEVDDNIDIEINPADLRIDVYRASGAGGQHVNKTESAVRITHLPTN 204
>gi|387872531|ref|YP_005803915.1| peptide chain release factor 1 (RF-1) [Erwinia pyrifoliae DSM
12163]
gi|283479628|emb|CAY75544.1| Peptide chain release factor 1 (RF-1) [Erwinia pyrifoliae DSM
12163]
Length = 310
Score = 41.2 bits (95), Expect = 0.079, Method: Composition-based stats.
Identities = 24/59 (40%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTD 63
RRH S SS+F ++D + +I+ D++ R SG GGQ V KT + V +TH+PT+
Sbjct: 157 RRHTSF-SSVFIYPEVDDNIDIEINPADLRIDVYRASGAGGQHVNKTESAVRITHLPTN 214
>gi|213963016|ref|ZP_03391275.1| putative peptide chain release factor H [Capnocytophaga sputigena
Capno]
gi|213954357|gb|EEB65680.1| putative peptide chain release factor H [Capnocytophaga sputigena
Capno]
Length = 230
Score = 41.2 bits (95), Expect = 0.079, Method: Composition-based stats.
Identities = 21/61 (34%), Positives = 32/61 (52%)
Query: 2 SIFRRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIP 61
S FR+ ++ ++LD + E+D+Q + R G GGQ V K N+ V TH+P
Sbjct: 82 STFRKFHQRSNWYIGVFELDQLQRQTFSERDVQFQTTRSQGNGGQNVNKVNSAVRATHLP 141
Query: 62 T 62
T
Sbjct: 142 T 142
>gi|409358684|ref|ZP_11237043.1| peptide chain release factor 2 [Dietzia alimentaria 72]
Length = 369
Score = 41.2 bits (95), Expect = 0.080, Method: Composition-based stats.
Identities = 18/35 (51%), Positives = 24/35 (68%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
I E D++ R SGPGGQ+V T++ V LTH+PT
Sbjct: 231 IPENDVRVDVYRSSGPGGQSVNTTDSAVRLTHVPT 265
>gi|388457040|ref|ZP_10139335.1| hypothetical protein FdumT_10727 [Fluoribacter dumoffii Tex-KL]
Length = 134
Score = 41.2 bits (95), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 27/42 (64%)
Query: 21 DYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
D+ ++ E D+ E+F+ GSG GGQ + KT + V L HIP+
Sbjct: 12 DFMAKLQVHETDLIEKFIIGSGKGGQKLHKTASTVYLKHIPS 53
>gi|340779042|ref|ZP_08698985.1| peptide chain release factor 1 [Acetobacter aceti NBRC 14818]
Length = 352
Score = 41.2 bits (95), Expect = 0.080, Method: Composition-based stats.
Identities = 19/36 (52%), Positives = 25/36 (69%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+IDEKD++ R SG GGQ V KT + V +TH+PT
Sbjct: 210 QIDEKDLRIDVYRASGAGGQHVNKTESAVRITHLPT 245
>gi|39997376|ref|NP_953327.1| peptide chain release factor 2 [Geobacter sulfurreducens PCA]
gi|409912720|ref|YP_006891185.1| peptide chain release factor 2 [Geobacter sulfurreducens KN400]
gi|39984267|gb|AAR35654.1| peptide chain release factor 2 [Geobacter sulfurreducens PCA]
gi|307634992|gb|ADI85036.2| peptide chain release factor 2 [Geobacter sulfurreducens KN400]
Length = 372
Score = 41.2 bits (95), Expect = 0.081, Method: Composition-based stats.
Identities = 25/58 (43%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S AS +F +++ KI E D++ R SG GGQ V T++ V LTH+PT
Sbjct: 210 RRHTSFAS-VFVFPEIEDDIEIKIAESDLRVDTYRSSGAGGQHVNTTDSAVRLTHLPT 266
>gi|374851785|dbj|BAL54735.1| peptide chain release factor RF-2 [uncultured beta proteobacterium]
Length = 293
Score = 41.2 bits (95), Expect = 0.081, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S AS +F ++D +I+ D++ R SG GGQ V +T++ V +THIPT
Sbjct: 129 RRHTSFAS-VFVYPEIDDKIEVEINPADLRIDTYRASGAGGQHVNRTDSAVRITHIPT 185
>gi|389843547|ref|YP_006345627.1| peptide chain release factor 2 [Mesotoga prima MesG1.Ag.4.2]
gi|387858293|gb|AFK06384.1| peptide chain release factor 2 [Mesotoga prima MesG1.Ag.4.2]
Length = 370
Score = 41.2 bits (95), Expect = 0.081, Method: Composition-based stats.
Identities = 26/61 (42%), Positives = 38/61 (62%), Gaps = 7/61 (11%)
Query: 5 RRHLSLAS-SLFRKYDLDYSKVPKID--EKDIQERFVRGSGPGGQAVAKTNNCVVLTHIP 61
RRH S AS S+F + D +VP+I+ +D++ R G GGQ V KT++ V +TH+P
Sbjct: 209 RRHTSFASVSVFPEMD----EVPEIEIRPEDLKIDTYRSGGAGGQHVNKTDSAVRITHLP 264
Query: 62 T 62
T
Sbjct: 265 T 265
>gi|291544247|emb|CBL17356.1| bacterial peptide chain release factor 2 (bRF-2) [Ruminococcus
champanellensis 18P13]
Length = 375
Score = 41.2 bits (95), Expect = 0.081, Method: Composition-based stats.
Identities = 25/58 (43%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S A+ L ++D S I +D++ R SG GGQ + KT++ V LTHIPT
Sbjct: 212 RRHTSFAA-LEVMPEIDDSMEVDIRLEDVKMDVFRSSGAGGQHINKTSSAVRLTHIPT 268
>gi|223982761|ref|ZP_03632989.1| hypothetical protein HOLDEFILI_00263 [Holdemania filiformis DSM
12042]
gi|223965261|gb|EEF69545.1| hypothetical protein HOLDEFILI_00263 [Holdemania filiformis DSM
12042]
Length = 327
Score = 41.2 bits (95), Expect = 0.081, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S AS D ++ IDE+D+ +R SG GGQ + KT++ V +TH PT
Sbjct: 172 RRHTSFASLDVMPQFSDEIEI-TIDERDLDVVTMRASGAGGQHINKTDSAVRMTHKPT 228
>gi|383820469|ref|ZP_09975725.1| peptide chain release factor 2 [Mycobacterium phlei RIVM601174]
gi|383334859|gb|EID13292.1| peptide chain release factor 2 [Mycobacterium phlei RIVM601174]
Length = 368
Score = 41.2 bits (95), Expect = 0.081, Method: Composition-based stats.
Identities = 19/35 (54%), Positives = 24/35 (68%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
I E D++ R SGPGGQ+V T++ V LTHIPT
Sbjct: 232 IPETDVRVDVYRSSGPGGQSVNTTDSAVRLTHIPT 266
>gi|343508550|ref|ZP_08745886.1| peptide chain release factor RF-2 [Vibrio ichthyoenteri ATCC
700023]
gi|342793258|gb|EGU29062.1| peptide chain release factor RF-2 [Vibrio ichthyoenteri ATCC
700023]
Length = 310
Score = 41.2 bits (95), Expect = 0.081, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTDS 64
RRH S AS+ F ++D + I+ D++ R SG GGQ V T + V +TH+PT++
Sbjct: 157 RRHTSFASA-FIYPEIDDNITIDINPSDLRIDVYRASGAGGQHVNTTESAVRITHVPTNT 215
>gi|297182853|gb|ADI19004.1| protein chain release factor a [uncultured alpha proteobacterium
HF0070_05I22]
Length = 334
Score = 41.2 bits (95), Expect = 0.081, Method: Composition-based stats.
Identities = 18/35 (51%), Positives = 25/35 (71%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
IDE D++ R SGPGGQ+V T++ V +TH+PT
Sbjct: 217 IDENDLRIDVFRSSGPGGQSVNTTDSAVRITHMPT 251
>gi|238763213|ref|ZP_04624178.1| Peptide chain release factor 2 [Yersinia kristensenii ATCC 33638]
gi|238698486|gb|EEP91238.1| Peptide chain release factor 2 [Yersinia kristensenii ATCC 33638]
Length = 289
Score = 41.2 bits (95), Expect = 0.081, Method: Composition-based stats.
Identities = 25/59 (42%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTD 63
RRH S SS F ++D +I+ D++ R SG GGQ V KT + V +THIPT+
Sbjct: 136 RRHTSF-SSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQHVNKTESAVRITHIPTN 193
>gi|83858490|ref|ZP_00952012.1| peptide chain release factor 2 [Oceanicaulis sp. HTCC2633]
gi|83853313|gb|EAP91165.1| peptide chain release factor 2 [Oceanicaulis sp. HTCC2633]
Length = 316
Score = 41.2 bits (95), Expect = 0.081, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S AS D ++ +I++KD++ R SG GGQ + KT++ V LTH PT
Sbjct: 156 RRHTSFASVWTYPLVDDTIEI-EIEDKDVRVDTYRASGAGGQHINKTDSAVRLTHEPT 212
>gi|343509734|ref|ZP_08746996.1| peptide chain release factor RF-2 [Vibrio scophthalmi LMG 19158]
gi|343514929|ref|ZP_08751994.1| peptide chain release factor RF-2 [Vibrio sp. N418]
gi|342799295|gb|EGU34870.1| peptide chain release factor RF-2 [Vibrio sp. N418]
gi|342803531|gb|EGU38881.1| peptide chain release factor RF-2 [Vibrio scophthalmi LMG 19158]
Length = 310
Score = 41.2 bits (95), Expect = 0.082, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTDS 64
RRH S AS+ F ++D + I+ D++ R SG GGQ V T + V +TH+PT++
Sbjct: 157 RRHTSFASA-FIYPEIDDNITIDINPSDLRIDVYRASGAGGQHVNTTESAVRITHVPTNT 215
>gi|342216427|ref|ZP_08709074.1| peptide chain release factor 1 [Peptoniphilus sp. oral taxon 375
str. F0436]
gi|341587317|gb|EGS30717.1| peptide chain release factor 1 [Peptoniphilus sp. oral taxon 375
str. F0436]
Length = 354
Score = 41.2 bits (95), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 26/36 (72%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+IDE +++ + R SG GGQ+V T++ V LTHIPT
Sbjct: 214 EIDETEVRVDYFRSSGHGGQSVNTTDSAVRLTHIPT 249
>gi|335044433|ref|ZP_08537458.1| protein chain release factor B [Methylophaga aminisulfidivorans MP]
gi|333787679|gb|EGL53563.1| protein chain release factor B [Methylophaga aminisulfidivorans MP]
Length = 348
Score = 41.2 bits (95), Expect = 0.082, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTDS 64
RRH S AS +F ++D + I+ D++ R SG GGQ V T++ V +TH+PT++
Sbjct: 195 RRHTSFAS-VFVYPEVDDTIEIDINPADLRTDTYRSSGAGGQHVNTTDSAVRITHVPTNT 253
>gi|24638154|sp|Q8ZHK4.1|RF2_YERPE RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|115346673|emb|CAL19556.1| peptide chain release factor 2 [Yersinia pestis CO92]
Length = 366
Score = 41.2 bits (95), Expect = 0.082, Method: Composition-based stats.
Identities = 25/59 (42%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTD 63
RRH S SS F ++D +I+ D++ R SG GGQ V KT + V +THIPT+
Sbjct: 213 RRHTSF-SSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQHVNKTESAVRITHIPTN 270
>gi|84393962|ref|ZP_00992702.1| peptide chain release factor 2 [Vibrio splendidus 12B01]
gi|84375406|gb|EAP92313.1| peptide chain release factor 2 [Vibrio splendidus 12B01]
Length = 303
Score = 41.2 bits (95), Expect = 0.082, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTDS 64
RRH S AS+ F ++D + I+ D++ R SG GGQ V T + V +TH+PT++
Sbjct: 150 RRHTSFASA-FIYPEIDDNITIDINPSDLRIDVYRASGAGGQHVNTTESAVRITHVPTNT 208
>gi|238796545|ref|ZP_04640052.1| Peptide chain release factor 2 [Yersinia mollaretii ATCC 43969]
gi|238719523|gb|EEQ11332.1| Peptide chain release factor 2 [Yersinia mollaretii ATCC 43969]
Length = 303
Score = 41.2 bits (95), Expect = 0.082, Method: Composition-based stats.
Identities = 25/59 (42%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTD 63
RRH S SS F ++D +I+ D++ R SG GGQ V KT + V +THIPT+
Sbjct: 150 RRHTSF-SSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQHVNKTESAVRITHIPTN 207
>gi|406912333|gb|EKD51968.1| hypothetical protein ACD_62C00149G0002 [uncultured bacterium]
Length = 312
Score = 41.2 bits (95), Expect = 0.083, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S S +F ++ +I E+D++ +R SG GGQ V KT++ V LTH PT
Sbjct: 156 RRHTSFCS-VFVYAQVNDDIDIQIKEEDLEFEAIRASGAGGQKVNKTSSAVRLTHKPT 212
>gi|393720641|ref|ZP_10340568.1| peptide chain release factor 1 [Sphingomonas echinoides ATCC 14820]
Length = 357
Score = 41.2 bits (95), Expect = 0.083, Method: Composition-based stats.
Identities = 18/36 (50%), Positives = 26/36 (72%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
KI++KD++ R SGPGGQ+V T++ V + HIPT
Sbjct: 215 KIEDKDLRIDIYRSSGPGGQSVNTTDSAVRIVHIPT 250
>gi|392382647|ref|YP_005031844.1| putative Class I peptide chain release factor domain protein
[Azospirillum brasilense Sp245]
gi|356877612|emb|CCC98454.1| putative Class I peptide chain release factor domain protein
[Azospirillum brasilense Sp245]
Length = 139
Score = 41.2 bits (95), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 23/30 (76%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVL 57
+DE ++QE F+R SGPGGQ V KT++ V L
Sbjct: 10 LDESELQESFIRASGPGGQHVNKTDSAVQL 39
>gi|336431245|ref|ZP_08611099.1| peptide chain release factor 1 [Lachnospiraceae bacterium
2_1_58FAA]
gi|336020167|gb|EGN49884.1| peptide chain release factor 1 [Lachnospiraceae bacterium
2_1_58FAA]
Length = 356
Score = 41.2 bits (95), Expect = 0.083, Method: Composition-based stats.
Identities = 20/35 (57%), Positives = 24/35 (68%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
IDEKDI+ +R SG GGQ V T++ V LTH PT
Sbjct: 215 IDEKDIRIDVMRASGNGGQCVNTTDSAVRLTHYPT 249
>gi|332638053|ref|ZP_08416916.1| peptide chain release factor 2 [Weissella cibaria KACC 11862]
Length = 332
Score = 41.2 bits (95), Expect = 0.083, Method: Composition-based stats.
Identities = 25/58 (43%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S S + +LD S I+ D++ R SG GGQ + KT++ V LTHIPT
Sbjct: 172 RRHTSFVS-IDVMPELDDSVDVDINPADVKMDVYRASGAGGQHINKTSSAVRLTHIPT 228
>gi|325285304|ref|YP_004261094.1| peptide chain release factor 1 [Cellulophaga lytica DSM 7489]
gi|324320758|gb|ADY28223.1| Peptide chain release factor 1 [Cellulophaga lytica DSM 7489]
Length = 358
Score = 41.2 bits (95), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 33/58 (56%), Gaps = 2/58 (3%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
R H S A+ + D+ +ID KD++ F SGPGGQ+V T + V LTH+PT
Sbjct: 194 RVHTSAATVMVLPEAEDFD--VQIDPKDVRIDFFCSSGPGGQSVNTTYSAVRLTHVPT 249
>gi|255280026|ref|ZP_05344581.1| peptide chain release factor 1 [Bryantella formatexigens DSM 14469]
gi|255269117|gb|EET62322.1| peptide chain release factor 1 [Marvinbryantia formatexigens DSM
14469]
Length = 357
Score = 41.2 bits (95), Expect = 0.083, Method: Composition-based stats.
Identities = 20/35 (57%), Positives = 24/35 (68%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
IDEKDI+ +R SG GGQ V T++ V LTH PT
Sbjct: 215 IDEKDIRIDVMRASGNGGQCVNTTDSAVRLTHYPT 249
>gi|154502573|ref|ZP_02039633.1| hypothetical protein RUMGNA_00386 [Ruminococcus gnavus ATCC 29149]
gi|153796765|gb|EDN79185.1| peptide chain release factor 1 [Ruminococcus gnavus ATCC 29149]
Length = 356
Score = 41.2 bits (95), Expect = 0.083, Method: Composition-based stats.
Identities = 20/35 (57%), Positives = 24/35 (68%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
IDEKDI+ +R SG GGQ V T++ V LTH PT
Sbjct: 215 IDEKDIRIDVMRASGNGGQCVNTTDSAVRLTHYPT 249
>gi|19552424|ref|NP_600426.1| peptide chain release factor 1 [Corynebacterium glutamicum ATCC
13032]
gi|62390088|ref|YP_225490.1| peptide chain release factor 1 [Corynebacterium glutamicum ATCC
13032]
gi|145295339|ref|YP_001138160.1| peptide chain release factor 1 [Corynebacterium glutamicum R]
gi|417970006|ref|ZP_12610941.1| peptide chain release factor 1 [Corynebacterium glutamicum S9114]
gi|24418635|sp|Q8NR57.1|RF1_CORGL RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|166223553|sp|A4QDG1.1|RF1_CORGB RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|21323967|dbj|BAB98593.1| Protein chain release factor A [Corynebacterium glutamicum ATCC
13032]
gi|41325424|emb|CAF19904.1| PEPTIDE CHAIN RELEASE FACTOR 1 (RF-1) [Corynebacterium glutamicum
ATCC 13032]
gi|140845259|dbj|BAF54258.1| hypothetical protein [Corynebacterium glutamicum R]
gi|344045688|gb|EGV41358.1| peptide chain release factor 1 [Corynebacterium glutamicum S9114]
Length = 358
Score = 41.2 bits (95), Expect = 0.083, Method: Composition-based stats.
Identities = 19/36 (52%), Positives = 25/36 (69%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+IDEKDI+ R SG GGQ V T++ V +TH+PT
Sbjct: 217 EIDEKDIRVDVYRSSGKGGQGVNTTDSAVRITHLPT 252
>gi|425773906|gb|EKV12231.1| hypothetical protein PDIG_45560 [Penicillium digitatum PHI26]
gi|425782408|gb|EKV20318.1| hypothetical protein PDIP_17500 [Penicillium digitatum Pd1]
Length = 188
Score = 41.2 bits (95), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 38/61 (62%), Gaps = 4/61 (6%)
Query: 6 RHLSLASSLFRKYDLDYSK-VP---KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIP 61
R L+ + LF + + +K +P KI++ DI +++G+GPGGQ + KTN+ V + H P
Sbjct: 12 RTLAAPARLFSQTPIVPAKPLPPRLKINDADISISYLKGTGPGGQKINKTNSAVQIIHKP 71
Query: 62 T 62
+
Sbjct: 72 S 72
>gi|420545423|ref|ZP_15043556.1| peptide chain release factor 2 [Yersinia pestis PY-01]
gi|420550737|ref|ZP_15048304.1| peptide chain release factor 2 [Yersinia pestis PY-02]
gi|420561835|ref|ZP_15058077.1| peptide chain release factor 2 [Yersinia pestis PY-04]
gi|420566864|ref|ZP_15062618.1| peptide chain release factor 2 [Yersinia pestis PY-05]
gi|420572518|ref|ZP_15067754.1| peptide chain release factor 2 [Yersinia pestis PY-06]
gi|420577839|ref|ZP_15072567.1| peptide chain release factor 2 [Yersinia pestis PY-07]
gi|420583190|ref|ZP_15077436.1| peptide chain release factor 2 [Yersinia pestis PY-08]
gi|420588324|ref|ZP_15082067.1| peptide chain release factor 2 [Yersinia pestis PY-09]
gi|420593653|ref|ZP_15086870.1| peptide chain release factor 2 [Yersinia pestis PY-10]
gi|420599350|ref|ZP_15091964.1| peptide chain release factor 2 [Yersinia pestis PY-11]
gi|420604826|ref|ZP_15096854.1| peptide chain release factor 2 [Yersinia pestis PY-12]
gi|420610169|ref|ZP_15101695.1| peptide chain release factor 2 [Yersinia pestis PY-13]
gi|420620886|ref|ZP_15111158.1| peptide chain release factor 2 [Yersinia pestis PY-15]
gi|420625954|ref|ZP_15115751.1| peptide chain release factor 2 [Yersinia pestis PY-16]
gi|420673706|ref|ZP_15158856.1| peptide chain release factor 2 [Yersinia pestis PY-46]
gi|420695473|ref|ZP_15178256.1| peptide chain release factor 2 [Yersinia pestis PY-53]
gi|420712171|ref|ZP_15192530.1| peptide chain release factor 2 [Yersinia pestis PY-56]
gi|420717547|ref|ZP_15197257.1| peptide chain release factor 2 [Yersinia pestis PY-58]
gi|420723169|ref|ZP_15202078.1| peptide chain release factor 2 [Yersinia pestis PY-59]
gi|420728820|ref|ZP_15207118.1| peptide chain release factor 2 [Yersinia pestis PY-60]
gi|420733870|ref|ZP_15211667.1| peptide chain release factor 2 [Yersinia pestis PY-61]
gi|420750456|ref|ZP_15226240.1| peptide chain release factor 2 [Yersinia pestis PY-65]
gi|420766829|ref|ZP_15240326.1| peptide chain release factor 2 [Yersinia pestis PY-72]
gi|420771821|ref|ZP_15244806.1| peptide chain release factor 2 [Yersinia pestis PY-76]
gi|420777187|ref|ZP_15249622.1| peptide chain release factor 2 [Yersinia pestis PY-88]
gi|420782706|ref|ZP_15254454.1| peptide chain release factor 2 [Yersinia pestis PY-89]
gi|420793563|ref|ZP_15264122.1| peptide chain release factor 2 [Yersinia pestis PY-91]
gi|420798701|ref|ZP_15268747.1| peptide chain release factor 2 [Yersinia pestis PY-92]
gi|420820172|ref|ZP_15288103.1| peptide chain release factor 2 [Yersinia pestis PY-96]
gi|420825262|ref|ZP_15292656.1| peptide chain release factor 2 [Yersinia pestis PY-98]
gi|420831064|ref|ZP_15297897.1| peptide chain release factor 2 [Yersinia pestis PY-99]
gi|420841033|ref|ZP_15306908.1| peptide chain release factor 2 [Yersinia pestis PY-101]
gi|420846653|ref|ZP_15311986.1| peptide chain release factor 2 [Yersinia pestis PY-102]
gi|420857571|ref|ZP_15321439.1| peptide chain release factor 2 [Yersinia pestis PY-113]
gi|391431308|gb|EIQ92895.1| peptide chain release factor 2 [Yersinia pestis PY-01]
gi|391432134|gb|EIQ93606.1| peptide chain release factor 2 [Yersinia pestis PY-02]
gi|391447156|gb|EIR07102.1| peptide chain release factor 2 [Yersinia pestis PY-04]
gi|391447870|gb|EIR07739.1| peptide chain release factor 2 [Yersinia pestis PY-05]
gi|391451145|gb|EIR10666.1| peptide chain release factor 2 [Yersinia pestis PY-06]
gi|391463331|gb|EIR21745.1| peptide chain release factor 2 [Yersinia pestis PY-07]
gi|391464408|gb|EIR22694.1| peptide chain release factor 2 [Yersinia pestis PY-08]
gi|391466689|gb|EIR24739.1| peptide chain release factor 2 [Yersinia pestis PY-09]
gi|391480228|gb|EIR36921.1| peptide chain release factor 2 [Yersinia pestis PY-10]
gi|391480965|gb|EIR37547.1| peptide chain release factor 2 [Yersinia pestis PY-11]
gi|391481099|gb|EIR37667.1| peptide chain release factor 2 [Yersinia pestis PY-12]
gi|391495377|gb|EIR50481.1| peptide chain release factor 2 [Yersinia pestis PY-13]
gi|391496106|gb|EIR51089.1| peptide chain release factor 2 [Yersinia pestis PY-15]
gi|391511231|gb|EIR64669.1| peptide chain release factor 2 [Yersinia pestis PY-16]
gi|391559978|gb|EIS08662.1| peptide chain release factor 2 [Yersinia pestis PY-46]
gi|391575630|gb|EIS22296.1| peptide chain release factor 2 [Yersinia pestis PY-53]
gi|391591054|gb|EIS35681.1| peptide chain release factor 2 [Yersinia pestis PY-56]
gi|391604368|gb|EIS47387.1| peptide chain release factor 2 [Yersinia pestis PY-60]
gi|391605263|gb|EIS48172.1| peptide chain release factor 2 [Yersinia pestis PY-58]
gi|391606316|gb|EIS49062.1| peptide chain release factor 2 [Yersinia pestis PY-59]
gi|391618866|gb|EIS60215.1| peptide chain release factor 2 [Yersinia pestis PY-61]
gi|391630386|gb|EIS70150.1| peptide chain release factor 2 [Yersinia pestis PY-65]
gi|391644248|gb|EIS82274.1| peptide chain release factor 2 [Yersinia pestis PY-72]
gi|391654117|gb|EIS90982.1| peptide chain release factor 2 [Yersinia pestis PY-76]
gi|391660475|gb|EIS96628.1| peptide chain release factor 2 [Yersinia pestis PY-88]
gi|391665239|gb|EIT00845.1| peptide chain release factor 2 [Yersinia pestis PY-89]
gi|391672266|gb|EIT07101.1| peptide chain release factor 2 [Yersinia pestis PY-91]
gi|391686662|gb|EIT20060.1| peptide chain release factor 2 [Yersinia pestis PY-92]
gi|391703002|gb|EIT34824.1| peptide chain release factor 2 [Yersinia pestis PY-96]
gi|391703599|gb|EIT35334.1| peptide chain release factor 2 [Yersinia pestis PY-98]
gi|391713504|gb|EIT44273.1| peptide chain release factor 2 [Yersinia pestis PY-99]
gi|391719572|gb|EIT49659.1| peptide chain release factor 2 [Yersinia pestis PY-101]
gi|391730376|gb|EIT59211.1| peptide chain release factor 2 [Yersinia pestis PY-102]
gi|391736725|gb|EIT64689.1| peptide chain release factor 2 [Yersinia pestis PY-113]
Length = 289
Score = 41.2 bits (95), Expect = 0.083, Method: Composition-based stats.
Identities = 25/59 (42%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTD 63
RRH S SS F ++D +I+ D++ R SG GGQ V KT + V +THIPT+
Sbjct: 136 RRHTSF-SSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQHVNKTESAVRITHIPTN 193
>gi|332160509|ref|YP_004297086.1| peptide chain release factor 2 [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|386311453|ref|YP_006007509.1| peptide chain release factor 2; programmed frameshift-containing,
partial [Yersinia enterocolitica subsp. palearctica Y11]
gi|433551553|ref|ZP_20507595.1| Peptide chain release factor 2; programmed frameshift-containing
[Yersinia enterocolitica IP 10393]
gi|318607022|emb|CBY28520.1| peptide chain release factor 2; programmed frameshift-containing
[Yersinia enterocolitica subsp. palearctica Y11]
gi|325664739|gb|ADZ41383.1| peptide chain release factor 2 [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|330863446|emb|CBX73565.1| peptide chain release factor 2 [Yersinia enterocolitica W22703]
gi|431787735|emb|CCO70635.1| Peptide chain release factor 2; programmed frameshift-containing
[Yersinia enterocolitica IP 10393]
Length = 289
Score = 41.2 bits (95), Expect = 0.083, Method: Composition-based stats.
Identities = 25/59 (42%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTD 63
RRH S SS F ++D +I+ D++ R SG GGQ V KT + V +THIPT+
Sbjct: 136 RRHTSF-SSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQHVNKTESAVRITHIPTN 193
>gi|306820781|ref|ZP_07454406.1| peptide chain release factor RF2 [Eubacterium yurii subsp.
margaretiae ATCC 43715]
gi|304551171|gb|EFM39137.1| peptide chain release factor RF2 [Eubacterium yurii subsp.
margaretiae ATCC 43715]
Length = 316
Score = 41.2 bits (95), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+RH S AS +LD S +I+ KD++ R SG GGQ V KT + + +THIPT
Sbjct: 161 KRHTSFASVDVLP-ELDDSIKVEINPKDLKVDTYRSSGAGGQHVNKTESAIRITHIPT 217
>gi|262280476|ref|ZP_06058260.1| peptide chain release factor 2 [Acinetobacter calcoaceticus
RUH2202]
gi|262258254|gb|EEY76988.1| peptide chain release factor 2 [Acinetobacter calcoaceticus
RUH2202]
Length = 310
Score = 41.2 bits (95), Expect = 0.083, Method: Composition-based stats.
Identities = 23/58 (39%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S S++F ++D + I+ D++ R SG GGQ + KT++ V LTH PT
Sbjct: 157 RRHTSF-SAVFISPEVDDNIEIDINPSDVRTDTYRASGAGGQHINKTDSAVRLTHTPT 213
>gi|238752991|ref|ZP_04614450.1| Peptide chain release factor 2 [Yersinia rohdei ATCC 43380]
gi|238708779|gb|EEQ01038.1| Peptide chain release factor 2 [Yersinia rohdei ATCC 43380]
Length = 310
Score = 41.2 bits (95), Expect = 0.083, Method: Composition-based stats.
Identities = 25/59 (42%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTD 63
RRH S SS F ++D +I+ D++ R SG GGQ V KT + V +THIPT+
Sbjct: 157 RRHTSF-SSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQHVNKTESAVRITHIPTN 214
>gi|123443573|ref|YP_001007546.1| peptide chain release factor 2 [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|166225120|sp|A1JPL5.1|RF2_YERE8 RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|122090534|emb|CAL13403.1| peptide chain release factor 2 [Yersinia enterocolitica subsp.
enterocolitica 8081]
Length = 365
Score = 41.2 bits (95), Expect = 0.083, Method: Composition-based stats.
Identities = 25/59 (42%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTD 63
RRH S SS F ++D +I+ D++ R SG GGQ V KT + V +THIPT+
Sbjct: 212 RRHTSF-SSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQHVNKTESAVRITHIPTN 269
>gi|84494447|ref|ZP_00993566.1| peptide chain release factor 2 [Janibacter sp. HTCC2649]
gi|84383940|gb|EAP99820.1| peptide chain release factor 2 [Janibacter sp. HTCC2649]
Length = 370
Score = 41.2 bits (95), Expect = 0.083, Method: Composition-based stats.
Identities = 18/38 (47%), Positives = 26/38 (68%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTDS 64
+I E D++ R SGPGGQ+V T++ V +THIPT +
Sbjct: 231 EIPENDLKIDVFRSSGPGGQSVNTTDSAVRMTHIPTGT 268
>gi|383316952|ref|YP_005377794.1| peptide chain release factor 2 [Frateuria aurantia DSM 6220]
gi|379044056|gb|AFC86112.1| peptide chain release factor 2 [Frateuria aurantia DSM 6220]
Length = 374
Score = 41.2 bits (95), Expect = 0.084, Method: Composition-based stats.
Identities = 23/58 (39%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S +S+F ++D I+ D++ R SG GGQ V KT + V +TH+PT
Sbjct: 212 RRHTSF-TSVFVSPEVDDDIEIDINPADLRTDVYRSSGAGGQHVNKTESAVRITHVPT 268
>gi|358451292|ref|ZP_09161726.1| peptide chain release factor 2 [Marinobacter manganoxydans MnI7-9]
gi|357224525|gb|EHJ03056.1| peptide chain release factor 2 [Marinobacter manganoxydans MnI7-9]
Length = 248
Score = 41.2 bits (95), Expect = 0.084, Method: Composition-based stats.
Identities = 25/58 (43%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S SS+F ++D S +I+ D++ R SG GGQ V +T + V LTH PT
Sbjct: 95 RRHTSF-SSVFVSPEVDDSFEIEINPADLRVDVYRASGAGGQHVNRTESAVRLTHNPT 151
>gi|227874895|ref|ZP_03993048.1| peptide chain release factor RF2 [Mobiluncus mulieris ATCC 35243]
gi|306818191|ref|ZP_07451922.1| peptide chain release factor RF2 [Mobiluncus mulieris ATCC 35239]
gi|307701756|ref|ZP_07638770.1| peptide chain release factor 2 [Mobiluncus mulieris FB024-16]
gi|227844670|gb|EEJ54826.1| peptide chain release factor RF2 [Mobiluncus mulieris ATCC 35243]
gi|304649155|gb|EFM46449.1| peptide chain release factor RF2 [Mobiluncus mulieris ATCC 35239]
gi|307613014|gb|EFN92269.1| peptide chain release factor 2 [Mobiluncus mulieris FB024-16]
Length = 378
Score = 41.2 bits (95), Expect = 0.084, Method: Composition-based stats.
Identities = 21/42 (50%), Positives = 27/42 (64%), Gaps = 3/42 (7%)
Query: 21 DYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
D+ VP E DI+ R SGPGGQ+V T++ V LTH+PT
Sbjct: 237 DHIDVP---ESDIKIDVFRSSGPGGQSVNTTDSAVRLTHLPT 275
>gi|150260100|ref|ZP_01916828.1| peptide chain release factor 2 [Yersinia pestis CA88-4125]
gi|153948098|ref|YP_001399866.1| peptide chain release factor 2 [Yersinia pseudotuberculosis IP
31758]
gi|218928062|ref|YP_002345937.1| peptide chain release factor 2 [Yersinia pestis CO92]
gi|229837575|ref|ZP_04457737.1| Peptide chain release factor 2 [Yersinia pestis Pestoides A]
gi|229840798|ref|ZP_04460957.1| Peptide chain release factor 2 [Yersinia pestis biovar Orientalis
str. PEXU2]
gi|229842643|ref|ZP_04462798.1| Peptide chain release factor 2 [Yersinia pestis biovar Orientalis
str. India 195]
gi|229903704|ref|ZP_04518817.1| Peptide chain release factor 2 [Yersinia pestis Nepal516]
gi|257168082|ref|NP_670572.2| peptide chain release factor 2 [Yersinia pestis KIM10+]
gi|384413531|ref|YP_005622893.1| Peptide chain release factor 2 [Yersinia pestis biovar Medievalis
str. Harbin 35]
gi|166977375|sp|A7FF38.1|RF2_YERP3 RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|149289508|gb|EDM39585.1| peptide chain release factor 2 [Yersinia pestis CA88-4125]
gi|152959593|gb|ABS47054.1| peptide chain release factor 2 [Yersinia pseudotuberculosis IP
31758]
gi|229679474|gb|EEO75577.1| Peptide chain release factor 2 [Yersinia pestis Nepal516]
gi|229690953|gb|EEO83007.1| Peptide chain release factor 2 [Yersinia pestis biovar Orientalis
str. India 195]
gi|229697164|gb|EEO87211.1| Peptide chain release factor 2 [Yersinia pestis biovar Orientalis
str. PEXU2]
gi|229704263|gb|EEO91274.1| Peptide chain release factor 2 [Yersinia pestis Pestoides A]
gi|320014035|gb|ADV97606.1| Peptide chain release factor 2 [Yersinia pestis biovar Medievalis
str. Harbin 35]
Length = 365
Score = 41.2 bits (95), Expect = 0.084, Method: Composition-based stats.
Identities = 25/59 (42%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTD 63
RRH S SS F ++D +I+ D++ R SG GGQ V KT + V +THIPT+
Sbjct: 212 RRHTSF-SSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQHVNKTESAVRITHIPTN 269
>gi|51597475|ref|YP_071666.1| peptide chain release factor 2 [Yersinia pseudotuberculosis IP
32953]
gi|81638630|sp|Q666T2.1|RF2_YERPS RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|51590757|emb|CAH22402.1| Peptide chain release factor 2 [Yersinia pseudotuberculosis IP
32953]
Length = 366
Score = 41.2 bits (95), Expect = 0.085, Method: Composition-based stats.
Identities = 25/59 (42%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTD 63
RRH S SS F ++D +I+ D++ R SG GGQ V KT + V +THIPT+
Sbjct: 213 RRHTSF-SSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQHVNKTESAVRITHIPTN 270
>gi|326204357|ref|ZP_08194215.1| peptide chain release factor 2 [Clostridium papyrosolvens DSM 2782]
gi|325985389|gb|EGD46227.1| peptide chain release factor 2 [Clostridium papyrosolvens DSM 2782]
Length = 373
Score = 41.2 bits (95), Expect = 0.085, Method: Composition-based stats.
Identities = 23/58 (39%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S AS+ +LD + I+ D++ R SG GGQ + KT++ + +THIPT
Sbjct: 212 RRHTSFASADVMP-ELDDTIEININPDDLRVDTYRASGAGGQHINKTDSAIRITHIPT 268
>gi|291542843|emb|CBL15953.1| bacterial peptide chain release factor 2 (bRF-2) [Ruminococcus
bromii L2-63]
Length = 372
Score = 41.2 bits (95), Expect = 0.085, Method: Composition-based stats.
Identities = 26/58 (44%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S SSL ++ I +DI+ R SG GGQ V KT++ V LTHIPT
Sbjct: 212 RRHTSF-SSLEVMPEIAKDTEVHIPPEDIKMDVYRASGAGGQKVNKTSSAVRLTHIPT 268
>gi|238917365|ref|YP_002930882.1| peptide chain release factor RF-1 [Eubacterium eligens ATCC 27750]
gi|259585239|sp|C4Z1S4.1|RF1_EUBE2 RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|238872725|gb|ACR72435.1| peptide chain release factor RF-1 [Eubacterium eligens ATCC 27750]
Length = 357
Score = 41.2 bits (95), Expect = 0.085, Method: Composition-based stats.
Identities = 20/35 (57%), Positives = 24/35 (68%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
IDEKDI+ +R SG GGQ V T++ V LTH PT
Sbjct: 215 IDEKDIRIDVMRASGNGGQCVNTTDSAVRLTHYPT 249
>gi|238754561|ref|ZP_04615915.1| Peptide chain release factor 2 [Yersinia ruckeri ATCC 29473]
gi|238707192|gb|EEP99555.1| Peptide chain release factor 2 [Yersinia ruckeri ATCC 29473]
Length = 310
Score = 41.2 bits (95), Expect = 0.085, Method: Composition-based stats.
Identities = 25/59 (42%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTD 63
RRH S SS F ++D +I+ D++ R SG GGQ V KT + V +THIPT+
Sbjct: 157 RRHTSF-SSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQHVNKTESAVRITHIPTN 214
>gi|297559304|ref|YP_003678278.1| peptide chain release factor 1 [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
gi|296843752|gb|ADH65772.1| peptide chain release factor 1 [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
Length = 356
Score = 41.2 bits (95), Expect = 0.085, Method: Composition-based stats.
Identities = 18/36 (50%), Positives = 26/36 (72%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+I EKD++ R SGPGGQ+V T++ V +TH+PT
Sbjct: 213 EIHEKDLRVDVYRSSGPGGQSVNTTDSAVRITHLPT 248
>gi|259909551|ref|YP_002649907.1| peptide chain release factor 2 [Erwinia pyrifoliae Ep1/96]
gi|224965173|emb|CAX56705.1| peptide chain release factor 2 [Erwinia pyrifoliae Ep1/96]
Length = 293
Score = 41.2 bits (95), Expect = 0.085, Method: Composition-based stats.
Identities = 24/59 (40%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTD 63
RRH S SS+F ++D + +I+ D++ R SG GGQ V KT + V +TH+PT+
Sbjct: 140 RRHTSF-SSVFIYPEVDDNIDIEINPADLRIDVYRASGAGGQHVNKTESAVRITHLPTN 197
>gi|238783657|ref|ZP_04627677.1| Peptide chain release factor 2 [Yersinia bercovieri ATCC 43970]
gi|238715370|gb|EEQ07362.1| Peptide chain release factor 2 [Yersinia bercovieri ATCC 43970]
Length = 289
Score = 41.2 bits (95), Expect = 0.085, Method: Composition-based stats.
Identities = 25/59 (42%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTD 63
RRH S SS F ++D +I+ D++ R SG GGQ V KT + V +THIPT+
Sbjct: 136 RRHTSF-SSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQHVNKTESAVRITHIPTN 193
>gi|45443320|ref|NP_994859.1| peptide chain release factor 2 [Yersinia pestis biovar Microtus
str. 91001]
gi|108806377|ref|YP_650293.1| peptide chain release factor 2 [Yersinia pestis Antiqua]
gi|108813248|ref|YP_649015.1| peptide chain release factor 2 [Yersinia pestis Nepal516]
gi|145597933|ref|YP_001162009.1| peptide chain release factor 2 [Yersinia pestis Pestoides F]
gi|170023172|ref|YP_001719677.1| peptide chain release factor 2 [Yersinia pseudotuberculosis YPIII]
gi|186896595|ref|YP_001873707.1| peptide chain release factor 2 [Yersinia pseudotuberculosis PB1/+]
gi|270487483|ref|ZP_06204557.1| peptide chain release factor 2 [Yersinia pestis KIM D27]
gi|294502944|ref|YP_003567006.1| peptide chain release factor RF-2 [Yersinia pestis Z176003]
gi|384121383|ref|YP_005504003.1| peptide chain release factor RF-2 [Yersinia pestis D106004]
gi|384125255|ref|YP_005507869.1| peptide chain release factor RF-2 [Yersinia pestis D182038]
gi|384137119|ref|YP_005519821.1| peptide chain release factor 2 [Yersinia pestis A1122]
gi|420556224|ref|ZP_15053171.1| peptide chain release factor 2 [Yersinia pestis PY-03]
gi|420615454|ref|ZP_15106384.1| peptide chain release factor 2 [Yersinia pestis PY-14]
gi|420631123|ref|ZP_15120428.1| peptide chain release factor 2 [Yersinia pestis PY-19]
gi|420636228|ref|ZP_15124995.1| peptide chain release factor 2 [Yersinia pestis PY-25]
gi|420641830|ref|ZP_15130049.1| peptide chain release factor 2 [Yersinia pestis PY-29]
gi|420646922|ref|ZP_15134716.1| peptide chain release factor 2 [Yersinia pestis PY-32]
gi|420652597|ref|ZP_15139813.1| peptide chain release factor 2 [Yersinia pestis PY-34]
gi|420658104|ref|ZP_15144766.1| peptide chain release factor 2 [Yersinia pestis PY-36]
gi|420663439|ref|ZP_15149542.1| peptide chain release factor 2 [Yersinia pestis PY-42]
gi|420668422|ref|ZP_15154048.1| peptide chain release factor 2 [Yersinia pestis PY-45]
gi|420679225|ref|ZP_15163867.1| peptide chain release factor 2 [Yersinia pestis PY-47]
gi|420684479|ref|ZP_15168584.1| peptide chain release factor 2 [Yersinia pestis PY-48]
gi|420689675|ref|ZP_15173188.1| peptide chain release factor 2 [Yersinia pestis PY-52]
gi|420700814|ref|ZP_15182857.1| peptide chain release factor 2 [Yersinia pestis PY-54]
gi|420706853|ref|ZP_15187724.1| peptide chain release factor 2 [Yersinia pestis PY-55]
gi|420739326|ref|ZP_15216592.1| peptide chain release factor 2 [Yersinia pestis PY-63]
gi|420744630|ref|ZP_15221286.1| peptide chain release factor 2 [Yersinia pestis PY-64]
gi|420755652|ref|ZP_15230794.1| peptide chain release factor 2 [Yersinia pestis PY-66]
gi|420761628|ref|ZP_15235633.1| peptide chain release factor 2 [Yersinia pestis PY-71]
gi|420788103|ref|ZP_15259198.1| peptide chain release factor 2 [Yersinia pestis PY-90]
gi|420804052|ref|ZP_15273560.1| peptide chain release factor 2 [Yersinia pestis PY-93]
gi|420809276|ref|ZP_15278291.1| peptide chain release factor 2 [Yersinia pestis PY-94]
gi|420815027|ref|ZP_15283446.1| peptide chain release factor 2 [Yersinia pestis PY-95]
gi|420835888|ref|ZP_15302248.1| peptide chain release factor 2 [Yersinia pestis PY-100]
gi|420852046|ref|ZP_15316751.1| peptide chain release factor 2 [Yersinia pestis PY-103]
gi|421762331|ref|ZP_16199129.1| peptide chain release factor 2 [Yersinia pestis INS]
gi|21960210|gb|AAM86823.1|AE013928_8 peptide chain release factor RF-2 [Yersinia pestis KIM10+]
gi|45438189|gb|AAS63736.1| peptide chain release factor RF-2 [Yersinia pestis biovar Microtus
str. 91001]
gi|108776896|gb|ABG19415.1| bacterial peptide chain release factor 2 (bRF-2) [Yersinia pestis
Nepal516]
gi|108778290|gb|ABG12348.1| bacterial peptide chain release factor 2 (bRF-2) [Yersinia pestis
Antiqua]
gi|145209629|gb|ABP39036.1| bacterial peptide chain release factor 2 (bRF-2) [Yersinia pestis
Pestoides F]
gi|169749706|gb|ACA67224.1| peptide chain release factor 2 [Yersinia pseudotuberculosis YPIII]
gi|186699621|gb|ACC90250.1| peptide chain release factor 2 [Yersinia pseudotuberculosis PB1/+]
gi|262360979|gb|ACY57700.1| peptide chain release factor RF-2 [Yersinia pestis D106004]
gi|262364919|gb|ACY61476.1| peptide chain release factor RF-2 [Yersinia pestis D182038]
gi|270335987|gb|EFA46764.1| peptide chain release factor 2 [Yersinia pestis KIM D27]
gi|294353403|gb|ADE63744.1| peptide chain release factor RF-2 [Yersinia pestis Z176003]
gi|342852248|gb|AEL70801.1| peptide chain release factor 2 [Yersinia pestis A1122]
gi|391434575|gb|EIQ95752.1| peptide chain release factor 2 [Yersinia pestis PY-03]
gi|391499349|gb|EIR53974.1| peptide chain release factor 2 [Yersinia pestis PY-14]
gi|391512445|gb|EIR65761.1| peptide chain release factor 2 [Yersinia pestis PY-19]
gi|391515407|gb|EIR68396.1| peptide chain release factor 2 [Yersinia pestis PY-25]
gi|391526679|gb|EIR78683.1| peptide chain release factor 2 [Yersinia pestis PY-29]
gi|391529681|gb|EIR81344.1| peptide chain release factor 2 [Yersinia pestis PY-34]
gi|391530601|gb|EIR82164.1| peptide chain release factor 2 [Yersinia pestis PY-32]
gi|391543417|gb|EIR93747.1| peptide chain release factor 2 [Yersinia pestis PY-36]
gi|391545288|gb|EIR95397.1| peptide chain release factor 2 [Yersinia pestis PY-42]
gi|391546075|gb|EIR96098.1| peptide chain release factor 2 [Yersinia pestis PY-45]
gi|391560888|gb|EIS09477.1| peptide chain release factor 2 [Yersinia pestis PY-47]
gi|391562581|gb|EIS10976.1| peptide chain release factor 2 [Yersinia pestis PY-48]
gi|391575125|gb|EIS21896.1| peptide chain release factor 2 [Yersinia pestis PY-52]
gi|391587534|gb|EIS32683.1| peptide chain release factor 2 [Yersinia pestis PY-55]
gi|391588913|gb|EIS33871.1| peptide chain release factor 2 [Yersinia pestis PY-54]
gi|391619569|gb|EIS60818.1| peptide chain release factor 2 [Yersinia pestis PY-63]
gi|391627112|gb|EIS67359.1| peptide chain release factor 2 [Yersinia pestis PY-64]
gi|391641821|gb|EIS80173.1| peptide chain release factor 2 [Yersinia pestis PY-71]
gi|391645360|gb|EIS83246.1| peptide chain release factor 2 [Yersinia pestis PY-66]
gi|391667025|gb|EIT02401.1| peptide chain release factor 2 [Yersinia pestis PY-90]
gi|391685184|gb|EIT18748.1| peptide chain release factor 2 [Yersinia pestis PY-93]
gi|391687714|gb|EIT20998.1| peptide chain release factor 2 [Yersinia pestis PY-94]
gi|391699385|gb|EIT31584.1| peptide chain release factor 2 [Yersinia pestis PY-95]
gi|391719270|gb|EIT49398.1| peptide chain release factor 2 [Yersinia pestis PY-100]
gi|391733091|gb|EIT61542.1| peptide chain release factor 2 [Yersinia pestis PY-103]
gi|411177466|gb|EKS47480.1| peptide chain release factor 2 [Yersinia pestis INS]
Length = 310
Score = 41.2 bits (95), Expect = 0.085, Method: Composition-based stats.
Identities = 25/59 (42%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTD 63
RRH S SS F ++D +I+ D++ R SG GGQ V KT + V +THIPT+
Sbjct: 157 RRHTSF-SSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQHVNKTESAVRITHIPTN 214
>gi|410667011|ref|YP_006919382.1| peptide chain release factor 2 [Thermacetogenium phaeum DSM 12270]
gi|409104758|gb|AFV10883.1| peptide chain release factor 2 [Thermacetogenium phaeum DSM 12270]
Length = 314
Score = 41.2 bits (95), Expect = 0.085, Method: Composition-based stats.
Identities = 24/59 (40%), Positives = 35/59 (59%), Gaps = 3/59 (5%)
Query: 5 RRHLSLAS-SLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S AS + + + D +I+ D++ R SGPGGQ V KT++ V +TH+PT
Sbjct: 158 RRHTSFASVDVIPQVEADTEI--EINPDDLRIDTYRASGPGGQYVNKTDSAVRITHLPT 214
>gi|418245203|ref|ZP_12871610.1| peptide chain release factor 1 [Corynebacterium glutamicum ATCC
14067]
gi|354510611|gb|EHE83533.1| peptide chain release factor 1 [Corynebacterium glutamicum ATCC
14067]
Length = 358
Score = 41.2 bits (95), Expect = 0.085, Method: Composition-based stats.
Identities = 19/36 (52%), Positives = 25/36 (69%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+IDEKDI+ R SG GGQ V T++ V +TH+PT
Sbjct: 217 EIDEKDIRVDVYRSSGKGGQGVNTTDSAVRITHLPT 252
>gi|343492185|ref|ZP_08730558.1| peptide chain release factor 2 [Vibrio nigripulchritudo ATCC 27043]
gi|342827525|gb|EGU61913.1| peptide chain release factor 2 [Vibrio nigripulchritudo ATCC 27043]
Length = 248
Score = 41.2 bits (95), Expect = 0.085, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTDS 64
RRH S AS+ F ++D + I+ D++ R SG GGQ V T + V +TH+PT++
Sbjct: 95 RRHTSFASA-FVYPEIDENIAIDINPADLRIDVYRASGAGGQHVNTTESAVRITHLPTNT 153
>gi|313201599|ref|YP_004040257.1| peptide chain release factor 1 [Methylovorus sp. MP688]
gi|312440915|gb|ADQ85021.1| peptide chain release factor 1 [Methylovorus sp. MP688]
Length = 347
Score = 41.2 bits (95), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 39/61 (63%), Gaps = 3/61 (4%)
Query: 5 RRHLSLAS-SLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTD 63
RRH S AS S+F ++D S +I+ D++ R SG GGQ + KT++ V +TH+PT+
Sbjct: 194 RRHTSFASVSVFP--EVDDSIEVEINPADLRIDTYRASGAGGQHINKTDSAVRITHLPTN 251
Query: 64 S 64
+
Sbjct: 252 T 252
>gi|269976501|ref|ZP_06183486.1| peptide chain release factor 2 [Mobiluncus mulieris 28-1]
gi|269935302|gb|EEZ91851.1| peptide chain release factor 2 [Mobiluncus mulieris 28-1]
Length = 378
Score = 41.2 bits (95), Expect = 0.086, Method: Composition-based stats.
Identities = 21/42 (50%), Positives = 27/42 (64%), Gaps = 3/42 (7%)
Query: 21 DYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
D+ VP E DI+ R SGPGGQ+V T++ V LTH+PT
Sbjct: 237 DHIDVP---ESDIKIDVFRSSGPGGQSVNTTDSAVRLTHLPT 275
>gi|392549205|ref|ZP_10296342.1| peptide chain release factor 2 [Pseudoalteromonas rubra ATCC 29570]
Length = 248
Score = 41.2 bits (95), Expect = 0.087, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTDS 64
RRH S AS+ F ++D + I+ D++ R SG GGQ V +T + V +TH+PT++
Sbjct: 95 RRHTSFASA-FVYPEIDDNIEIDINPADLRIDVYRASGAGGQHVNRTESAVRITHLPTNT 153
>gi|332983173|ref|YP_004464614.1| peptide chain release factor 2 (bRF-2) [Mahella australiensis 50-1
BON]
gi|332700851|gb|AEE97792.1| bacterial peptide chain release factor 2 (bRF-2) [Mahella
australiensis 50-1 BON]
Length = 353
Score = 41.2 bits (95), Expect = 0.087, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S AS +LD + +I+ +D++ R SG GGQ V KT + + +THIPT
Sbjct: 194 RRHTSFASVDVMP-ELDDDEGVEINPEDLKIDTYRSSGAGGQHVNKTESAIRITHIPT 250
>gi|300783176|ref|YP_003763467.1| peptide chain release factor RF-2 [Amycolatopsis mediterranei U32]
gi|384146402|ref|YP_005529218.1| peptide chain release factor RF-2 [Amycolatopsis mediterranei S699]
gi|399535062|ref|YP_006547724.1| peptide chain release factor RF-2 [Amycolatopsis mediterranei S699]
gi|299792690|gb|ADJ43065.1| peptide chain release factor RF-2 [Amycolatopsis mediterranei U32]
gi|340524556|gb|AEK39761.1| peptide chain release factor RF-2 [Amycolatopsis mediterranei S699]
gi|398315832|gb|AFO74779.1| peptide chain release factor RF-2 [Amycolatopsis mediterranei S699]
Length = 357
Score = 41.2 bits (95), Expect = 0.087, Method: Composition-based stats.
Identities = 18/35 (51%), Positives = 25/35 (71%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+ EKDI+ R SGPGGQ+V T++ V +TH+PT
Sbjct: 224 VAEKDIRVDVYRSSGPGGQSVNTTDSAVRITHLPT 258
>gi|410634722|ref|ZP_11345355.1| peptide chain release factor 2 [Glaciecola arctica BSs20135]
gi|410145765|dbj|GAC22222.1| peptide chain release factor 2 [Glaciecola arctica BSs20135]
Length = 349
Score = 41.2 bits (95), Expect = 0.088, Method: Composition-based stats.
Identities = 24/59 (40%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTD 63
RRH S AS +F ++D +ID D++ R SG GGQ V +T++ V +TH PT+
Sbjct: 196 RRHTSFAS-VFAYPEVDDDIEIEIDPSDLRIDTYRASGAGGQHVNRTDSAVRITHEPTN 253
>gi|406830835|ref|ZP_11090429.1| hypothetical protein SpalD1_04332 [Schlesneria paludicola DSM
18645]
Length = 336
Score = 41.2 bits (95), Expect = 0.088, Method: Composition-based stats.
Identities = 18/36 (50%), Positives = 25/36 (69%)
Query: 29 DEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTDS 64
D K I+E R SG GGQ V KT++ + LTH+PT++
Sbjct: 198 DPKVIREDICRASGAGGQKVNKTDSAIRLTHLPTNA 233
>gi|402310432|ref|ZP_10829398.1| peptide chain release factor 2 [Eubacterium sp. AS15]
gi|400368884|gb|EJP21891.1| peptide chain release factor 2 [Eubacterium sp. AS15]
Length = 316
Score = 41.2 bits (95), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+RH S AS +LD S +I+ KD++ R SG GGQ V KT + + +THIPT
Sbjct: 161 KRHTSFASVDVLP-ELDDSINVEINPKDLKVDTYRSSGAGGQHVNKTESAIRITHIPT 217
>gi|385834799|ref|YP_005872573.1| peptide chain release factor 2 [Lactobacillus rhamnosus ATCC 8530]
gi|355394290|gb|AER63720.1| peptide chain release factor 2 [Lactobacillus rhamnosus ATCC 8530]
Length = 332
Score = 41.2 bits (95), Expect = 0.088, Method: Composition-based stats.
Identities = 25/58 (43%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S AS +LD S I +DI+ R SG GGQ + KT++ V L H+PT
Sbjct: 172 RRHTSFASVDVMP-ELDNSIEVDIRPEDIKMEVFRSSGAGGQHINKTSSAVRLIHLPT 228
>gi|417931626|ref|ZP_12574991.1| peptide chain release factor 1 [Propionibacterium acnes
SK182B-JCVI]
gi|340775569|gb|EGR97622.1| peptide chain release factor 1 [Propionibacterium acnes
SK182B-JCVI]
Length = 361
Score = 41.2 bits (95), Expect = 0.088, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Query: 19 DLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
D+D ++V ID D++ R SGPGGQ V T++ V LTH+PT
Sbjct: 208 DVDETEV-DIDPADVRVDVYRSSGPGGQGVNTTDSAVRLTHLPT 250
>gi|269794320|ref|YP_003313775.1| peptide chain release factor 1 [Sanguibacter keddieii DSM 10542]
gi|269096505|gb|ACZ20941.1| bacterial peptide chain release factor 1 (bRF-1) [Sanguibacter
keddieii DSM 10542]
Length = 361
Score = 41.2 bits (95), Expect = 0.088, Method: Composition-based stats.
Identities = 17/36 (47%), Positives = 26/36 (72%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+ID+ D++ R SGPGGQ+V T++ V +TH+PT
Sbjct: 219 EIDQNDLRIDVYRSSGPGGQSVNTTDSAVRITHVPT 254
>gi|199597236|ref|ZP_03210667.1| Protein chain release factor B [Lactobacillus rhamnosus HN001]
gi|229551742|ref|ZP_04440467.1| peptide chain release factor RF2 [Lactobacillus rhamnosus LMS2-1]
gi|258539140|ref|YP_003173639.1| peptide chain release factor B-like protein [Lactobacillus
rhamnosus Lc 705]
gi|418070186|ref|ZP_12707461.1| peptide chain release factor 2 [Lactobacillus rhamnosus R0011]
gi|421769338|ref|ZP_16206045.1| Peptide chain release factor 2 [Lactobacillus rhamnosus LRHMDP2]
gi|421772379|ref|ZP_16209035.1| Peptide chain release factor 2 [Lactobacillus rhamnosus LRHMDP3]
gi|423079069|ref|ZP_17067744.1| peptide chain release factor 2 [Lactobacillus rhamnosus ATCC 21052]
gi|199591752|gb|EDY99827.1| Protein chain release factor B [Lactobacillus rhamnosus HN001]
gi|229314873|gb|EEN80846.1| peptide chain release factor RF2 [Lactobacillus rhamnosus LMS2-1]
gi|257150816|emb|CAR89788.1| Peptide chain release factor 2 [Lactobacillus rhamnosus Lc 705]
gi|357539606|gb|EHJ23623.1| peptide chain release factor 2 [Lactobacillus rhamnosus R0011]
gi|357548203|gb|EHJ30074.1| peptide chain release factor 2 [Lactobacillus rhamnosus ATCC 21052]
gi|411183947|gb|EKS51082.1| Peptide chain release factor 2 [Lactobacillus rhamnosus LRHMDP3]
gi|411184469|gb|EKS51601.1| Peptide chain release factor 2 [Lactobacillus rhamnosus LRHMDP2]
Length = 332
Score = 41.2 bits (95), Expect = 0.088, Method: Composition-based stats.
Identities = 25/58 (43%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S AS +LD S I +DI+ R SG GGQ + KT++ V L H+PT
Sbjct: 172 RRHTSFASVDVMP-ELDNSIEVDIRPEDIKMEVFRSSGAGGQHINKTSSAVRLIHLPT 228
>gi|37527422|ref|NP_930766.1| peptide chain release factor 2 [Photorhabdus luminescens subsp.
laumondii TTO1]
gi|36786857|emb|CAE15922.1| Peptide chain release factor 2 (RF-2) [Photorhabdus luminescens
subsp. laumondii TTO1]
Length = 310
Score = 41.2 bits (95), Expect = 0.088, Method: Composition-based stats.
Identities = 25/59 (42%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTD 63
RRH S SS F ++D +I+ D++ R SG GGQ V KT + V +THIPT+
Sbjct: 157 RRHTSF-SSAFIYPEVDDDIDIEINPADLRIDVYRASGAGGQHVNKTESAVRITHIPTN 214
>gi|387885884|ref|YP_006316183.1| peptide chain release factor 2 [Francisella noatunensis subsp.
orientalis str. Toba 04]
gi|386870700|gb|AFJ42707.1| peptide chain release factor 2 [Francisella noatunensis subsp.
orientalis str. Toba 04]
Length = 325
Score = 41.2 bits (95), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTD 63
+RH S AS +F ++D +I+ D++ R SG GGQ V KT++ V +THIPT+
Sbjct: 172 KRHTSFAS-VFISPEVDDDIDIEINPADLRVDTYRASGAGGQHVNKTDSAVRITHIPTN 229
>gi|374611917|ref|ZP_09684700.1| peptide chain release factor 2 [Mycobacterium tusciae JS617]
gi|373548561|gb|EHP75252.1| peptide chain release factor 2 [Mycobacterium tusciae JS617]
Length = 371
Score = 41.2 bits (95), Expect = 0.088, Method: Composition-based stats.
Identities = 19/35 (54%), Positives = 24/35 (68%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
I E D++ R SGPGGQ+V T++ V LTHIPT
Sbjct: 235 IPEGDVRVDVYRSSGPGGQSVNTTDSAVRLTHIPT 269
>gi|400535590|ref|ZP_10799126.1| peptide chain release factor 2 [Mycobacterium colombiense CECT
3035]
gi|400330633|gb|EJO88130.1| peptide chain release factor 2 [Mycobacterium colombiense CECT
3035]
Length = 370
Score = 41.2 bits (95), Expect = 0.088, Method: Composition-based stats.
Identities = 19/35 (54%), Positives = 24/35 (68%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
I E D++ R SGPGGQ+V T++ V LTHIPT
Sbjct: 234 IPEGDVRVDVYRSSGPGGQSVNTTDSAVRLTHIPT 268
>gi|290954114|ref|ZP_06558735.1| peptide chain release factor 2 [Francisella tularensis subsp.
holarctica URFT1]
Length = 241
Score = 41.2 bits (95), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTD 63
+RH S AS +F ++D +I+ D++ R SG GGQ V KT++ V +THIPT+
Sbjct: 88 KRHTSFAS-VFISPEVDDDIDIEINPADLRVDTYRASGAGGQHVNKTDSAVRITHIPTN 145
>gi|385793953|ref|YP_005830359.1| peptide chain release factor 2 [Francisella tularensis subsp.
tularensis NE061598]
gi|282158488|gb|ADA77879.1| peptide chain release factor 2 [Francisella tularensis subsp.
tularensis NE061598]
Length = 248
Score = 41.2 bits (95), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTD 63
+RH S AS +F ++D +I+ D++ R SG GGQ V KT++ V +THIPT+
Sbjct: 95 KRHTSFAS-VFISPEVDDDIDIEINPTDLRVDTYRASGAGGQHVNKTDSAVRITHIPTN 152
>gi|254876005|ref|ZP_05248715.1| peptide chain release factor [Francisella philomiragia subsp.
philomiragia ATCC 25015]
gi|254842026|gb|EET20440.1| peptide chain release factor [Francisella philomiragia subsp.
philomiragia ATCC 25015]
Length = 325
Score = 41.2 bits (95), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTD 63
+RH S AS +F ++D +I+ D++ R SG GGQ V KT++ V +THIPT+
Sbjct: 172 KRHTSFAS-VFISPEVDDDIDIEINPADLRVDTYRASGAGGQHVNKTDSAVRITHIPTN 229
>gi|225624841|gb|ACN96555.1| PrfB [Francisella noatunensis subsp. orientalis]
Length = 294
Score = 41.2 bits (95), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTD 63
+RH S AS +F ++D +I+ D++ R SG GGQ V KT++ V +THIPT+
Sbjct: 172 KRHTSFAS-VFISPEVDDDIDIEINPADLRVDTYRASGAGGQHVNKTDSAVRITHIPTN 229
>gi|253988706|ref|YP_003040062.1| peptide chain release factor 2 (rf-2) [Photorhabdus asymbiotica]
gi|211637969|emb|CAR66597.1| peptide chain release factor 2 (rf-2) [Photorhabdus asymbiotica
subsp. asymbiotica ATCC 43949]
gi|253780156|emb|CAQ83317.1| peptide chain release factor 2 (rf-2) [Photorhabdus asymbiotica]
Length = 310
Score = 41.2 bits (95), Expect = 0.088, Method: Composition-based stats.
Identities = 25/59 (42%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTD 63
RRH S SS F ++D +I+ D++ R SG GGQ V KT + V +THIPT+
Sbjct: 157 RRHTSF-SSAFIYPEVDDDIDIEINPADLRIDVYRASGAGGQHVNKTESAVRITHIPTN 214
>gi|86147405|ref|ZP_01065718.1| peptide chain release factor 2 [Vibrio sp. MED222]
gi|218708550|ref|YP_002416171.1| peptide chain release factor 2 [Vibrio splendidus LGP32]
gi|85834833|gb|EAQ52978.1| peptide chain release factor 2 [Vibrio sp. MED222]
gi|218321569|emb|CAV17521.1| Peptide chain release factor 2 [Vibrio splendidus LGP32]
Length = 303
Score = 41.2 bits (95), Expect = 0.088, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTDS 64
RRH S AS+ F ++D + I+ D++ R SG GGQ V T + V +TH+PT++
Sbjct: 150 RRHTSFASA-FIYPEIDDNITIDINPSDLRIDVYRASGAGGQHVNTTESAVRITHVPTNT 208
>gi|403050473|ref|ZP_10904957.1| peptide chain release factor 2 [Acinetobacter bereziniae LMG 1003]
gi|445418200|ref|ZP_21434831.1| peptide chain release factor 2 [Acinetobacter sp. WC-743]
gi|444760889|gb|ELW85318.1| peptide chain release factor 2 [Acinetobacter sp. WC-743]
Length = 310
Score = 41.2 bits (95), Expect = 0.089, Method: Composition-based stats.
Identities = 23/58 (39%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S S++F ++D + I+ D++ R SG GGQ + KT++ V LTH PT
Sbjct: 157 RRHTSF-SAVFVSPEVDDNIEIDINPADVRTDTYRASGAGGQHINKTDSAVRLTHAPT 213
>gi|392412307|ref|YP_006448914.1| bacterial peptide chain release factor 1 (bRF-1) [Desulfomonile
tiedjei DSM 6799]
gi|390625443|gb|AFM26650.1| bacterial peptide chain release factor 1 (bRF-1) [Desulfomonile
tiedjei DSM 6799]
Length = 359
Score = 41.2 bits (95), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 26/36 (72%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTD 63
ID KD++ R SGPGGQ+V T++ V +TH+PT+
Sbjct: 217 IDPKDLKIDVYRSSGPGGQSVNTTDSAVRVTHLPTN 252
>gi|271962992|ref|YP_003337188.1| peptide chain release factor 2 [Streptosporangium roseum DSM 43021]
gi|270506167|gb|ACZ84445.1| peptide chain release factor 2 [Streptosporangium roseum DSM 43021]
Length = 372
Score = 41.2 bits (95), Expect = 0.089, Method: Composition-based stats.
Identities = 18/35 (51%), Positives = 24/35 (68%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
I+E D++ R SGPGGQ V T++ V LTH+PT
Sbjct: 233 INEDDLRVDVYRSSGPGGQGVNTTDSAVRLTHLPT 267
>gi|150388626|ref|YP_001318675.1| peptide chain release factor 2 [Alkaliphilus metalliredigens QYMF]
gi|149948488|gb|ABR47016.1| peptide chain release factor 2 [Alkaliphilus metalliredigens QYMF]
Length = 329
Score = 41.2 bits (95), Expect = 0.089, Method: Composition-based stats.
Identities = 25/58 (43%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+RH S AS +LD S +I+ D++ R SG GGQ V KT++ V +THIPT
Sbjct: 171 KRHTSFASVDVMP-ELDDSIEVEINPNDLKIDTYRASGAGGQHVNKTDSAVRITHIPT 227
>gi|254557155|ref|YP_003063572.1| peptide chain release factor 1 [Lactobacillus plantarum JDM1]
gi|300766721|ref|ZP_07076638.1| peptide chain release factor RF1 [Lactobacillus plantarum subsp.
plantarum ATCC 14917]
gi|308181160|ref|YP_003925288.1| peptide chain release factor 1 [Lactobacillus plantarum subsp.
plantarum ST-III]
gi|380033087|ref|YP_004890078.1| peptide chain release factor 1 [Lactobacillus plantarum WCFS1]
gi|418275886|ref|ZP_12891209.1| peptide chain release factor 1 [Lactobacillus plantarum subsp.
plantarum NC8]
gi|448821870|ref|YP_007415032.1| Peptide chain release factor 1 [Lactobacillus plantarum ZJ316]
gi|32171522|sp|Q88UT2.1|RF1_LACPL RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|254046082|gb|ACT62875.1| peptide chain release factor 1 [Lactobacillus plantarum JDM1]
gi|300495821|gb|EFK30972.1| peptide chain release factor RF1 [Lactobacillus plantarum subsp.
plantarum ATCC 14917]
gi|308046651|gb|ADN99194.1| peptide chain release factor 1 [Lactobacillus plantarum subsp.
plantarum ST-III]
gi|342242330|emb|CCC79564.1| peptide chain release factor 1 [Lactobacillus plantarum WCFS1]
gi|376009437|gb|EHS82766.1| peptide chain release factor 1 [Lactobacillus plantarum subsp.
plantarum NC8]
gi|448275367|gb|AGE39886.1| Peptide chain release factor 1 [Lactobacillus plantarum ZJ316]
Length = 360
Score = 41.2 bits (95), Expect = 0.090, Method: Composition-based stats.
Identities = 18/35 (51%), Positives = 25/35 (71%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
ID+KDI+ R SG GGQ + KT++ V +TH+PT
Sbjct: 218 IDQKDIRTDVFRSSGAGGQHINKTSSAVRMTHLPT 252
>gi|359449287|ref|ZP_09238784.1| peptide chain release factor 2 [Pseudoalteromonas sp. BSi20480]
gi|358044936|dbj|GAA75033.1| peptide chain release factor 2 [Pseudoalteromonas sp. BSi20480]
Length = 283
Score = 41.2 bits (95), Expect = 0.090, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTDS 64
RRH S AS+ F ++D + I+ D++ R SG GGQ V T + V +TH+PT++
Sbjct: 130 RRHTSFASA-FVYPEIDDNIEIDINPSDLRIDVYRASGAGGQHVNTTESAVRITHVPTNT 188
>gi|387823735|ref|YP_005823206.1| Peptide chain release factor 2 [Francisella cf. novicida 3523]
gi|328675334|gb|AEB28009.1| Peptide chain release factor 2 [Francisella cf. novicida 3523]
Length = 325
Score = 41.2 bits (95), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTD 63
+RH S AS +F ++D +I+ D++ R SG GGQ V KT++ V +THIPT+
Sbjct: 172 KRHTSFAS-VFISPEVDDDIDIEINPADLRVDTYRASGAGGQHVNKTDSAVRITHIPTN 229
>gi|292900474|ref|YP_003539843.1| peptide chain release factor 2 [Erwinia amylovora ATCC 49946]
gi|291200322|emb|CBJ47450.1| peptide chain release factor 2 [Erwinia amylovora ATCC 49946]
Length = 365
Score = 41.2 bits (95), Expect = 0.090, Method: Composition-based stats.
Identities = 24/59 (40%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTD 63
RRH S SS+F ++D + +I+ D++ R SG GGQ V KT + V +TH+PT+
Sbjct: 212 RRHTSF-SSVFIYPEVDDNIDIEINPADLRIDVYRASGAGGQHVNKTESAVRITHLPTN 269
>gi|258507895|ref|YP_003170646.1| peptide chain release factor 2 [Lactobacillus rhamnosus GG]
gi|385827576|ref|YP_005865348.1| protein chain release factor B [Lactobacillus rhamnosus GG]
gi|257147822|emb|CAR86795.1| Peptide chain release factor 2 [Lactobacillus rhamnosus GG]
gi|259649221|dbj|BAI41383.1| protein chain release factor B [Lactobacillus rhamnosus GG]
Length = 332
Score = 41.2 bits (95), Expect = 0.090, Method: Composition-based stats.
Identities = 25/58 (43%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S AS +LD S I +DI+ R SG GGQ + KT++ V L H+PT
Sbjct: 172 RRHTSFASVDVMP-ELDNSIEVDIRPEDIKMEVFRSSGAGGQHINKTSSAVRLIHLPT 228
>gi|195973764|gb|ACG63447.1| peptide chain release factor 2 [Francisella philomiragia]
Length = 294
Score = 41.2 bits (95), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTD 63
+RH S AS +F ++D +I+ D++ R SG GGQ V KT++ V +THIPT+
Sbjct: 172 KRHTSFAS-VFISPEVDDDIDIEINPADLRVDTYRASGAGGQHVNKTDSAVRITHIPTN 229
>gi|213964464|ref|ZP_03392664.1| peptide chain release factor 1 [Corynebacterium amycolatum SK46]
gi|213952657|gb|EEB64039.1| peptide chain release factor 1 [Corynebacterium amycolatum SK46]
Length = 357
Score = 41.2 bits (95), Expect = 0.090, Method: Composition-based stats.
Identities = 19/36 (52%), Positives = 25/36 (69%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+IDEKD++ R SG GGQ V T++ V LTH+PT
Sbjct: 217 QIDEKDLRVDVYRSSGKGGQGVNTTDSAVRLTHLPT 252
>gi|433448893|ref|ZP_20411758.1| peptide chain release factor 2 [Weissella ceti NC36]
gi|429539282|gb|ELA07319.1| peptide chain release factor 2 [Weissella ceti NC36]
Length = 332
Score = 41.2 bits (95), Expect = 0.091, Method: Composition-based stats.
Identities = 25/58 (43%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S S + +LD S I+ D++ R SG GGQ + KT++ V LTHIPT
Sbjct: 172 RRHTSFVS-IDVMPELDDSVEVDINPADVKMDVYRASGAGGQHINKTSSAVRLTHIPT 228
>gi|89257152|ref|YP_514514.1| peptide chain release factor 2 [Francisella tularensis subsp.
holarctica LVS]
gi|115315491|ref|YP_764214.1| peptide chain release factor 2 [Francisella tularensis subsp.
holarctica OSU18]
gi|156503377|ref|YP_001429442.1| peptide chain release factor 2 [Francisella tularensis subsp.
holarctica FTNF002-00]
gi|254368376|ref|ZP_04984394.1| peptide chain release factor 2 [Francisella tularensis subsp.
holarctica 257]
gi|254368387|ref|ZP_04984404.1| peptide chain release factor 2 [Francisella tularensis subsp.
holarctica FSC022]
gi|422939390|ref|YP_007012537.1| peptide chain release factor 2 [Francisella tularensis subsp.
holarctica FSC200]
gi|89144983|emb|CAJ80343.1| peptide chain release factor 2 [Francisella tularensis subsp.
holarctica LVS]
gi|115130390|gb|ABI83577.1| peptide chain release factor B [Francisella tularensis subsp.
holarctica OSU18]
gi|134254184|gb|EBA53278.1| peptide chain release factor 2 [Francisella tularensis subsp.
holarctica 257]
gi|156253980|gb|ABU62486.1| peptide chain release factor 2 [Francisella tularensis subsp.
holarctica FTNF002-00]
gi|157121281|gb|EDO65482.1| peptide chain release factor 2 [Francisella tularensis subsp.
holarctica FSC022]
gi|407294541|gb|AFT93447.1| peptide chain release factor 2 [Francisella tularensis subsp.
holarctica FSC200]
Length = 325
Score = 41.2 bits (95), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTD 63
+RH S AS +F ++D +I+ D++ R SG GGQ V KT++ V +THIPT+
Sbjct: 172 KRHTSFAS-VFISPEVDDDIDIEINPADLRVDTYRASGAGGQHVNKTDSAVRITHIPTN 229
>gi|422009493|ref|ZP_16356476.1| peptide chain release factor 2 [Providencia rettgeri Dmel1]
gi|414093311|gb|EKT54983.1| peptide chain release factor 2 [Providencia rettgeri Dmel1]
Length = 293
Score = 41.2 bits (95), Expect = 0.091, Method: Composition-based stats.
Identities = 25/59 (42%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTD 63
RRH S SS F ++D +I+ D++ R SG GGQ V KT + V +THIPT+
Sbjct: 140 RRHTSF-SSAFIYPEVDDDIDIEINPADLRIDVYRASGAGGQHVNKTESAVRITHIPTN 197
>gi|383772216|ref|YP_005451282.1| peptide chain release factor 2 [Bradyrhizobium sp. S23321]
gi|381360340|dbj|BAL77170.1| peptide chain release factor 2 [Bradyrhizobium sp. S23321]
Length = 322
Score = 41.2 bits (95), Expect = 0.091, Method: Composition-based stats.
Identities = 27/59 (45%), Positives = 34/59 (57%), Gaps = 3/59 (5%)
Query: 5 RRHLSLAS-SLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S +S +F D D K+ I E D++ +R G GGQ V KT + V LTHIPT
Sbjct: 156 RRHTSFSSVQVFPVID-DSIKI-DIKESDVRVDTMRSGGAGGQHVNKTESAVRLTHIPT 212
>gi|56707356|ref|YP_169252.1| peptide chain release factor 2 [Francisella tularensis subsp.
tularensis SCHU S4]
gi|110669826|ref|YP_666383.1| peptide chain release factor 2 [Francisella tularensis subsp.
tularensis FSC198]
gi|254370940|ref|ZP_04986945.1| peptide chain release factor 2 [Francisella tularensis subsp.
tularensis FSC033]
gi|254874190|ref|ZP_05246900.1| peptide chain release factor 2 [Francisella tularensis subsp.
tularensis MA00-2987]
gi|379716556|ref|YP_005304892.1| Peptide chain release factor 2 [Francisella tularensis subsp.
tularensis TIGB03]
gi|379725239|ref|YP_005317425.1| peptide chain release factor 2 [Francisella tularensis subsp.
tularensis TI0902]
gi|54112809|gb|AAV29038.1| NT02FT0149 [synthetic construct]
gi|56603848|emb|CAG44824.1| peptide chain release factor 2 [Francisella tularensis subsp.
tularensis SCHU S4]
gi|110320159|emb|CAL08207.1| peptide chain release factor 2 [Francisella tularensis subsp.
tularensis FSC198]
gi|151569183|gb|EDN34837.1| peptide chain release factor 2 [Francisella tularensis subsp.
tularensis FSC033]
gi|254840189|gb|EET18625.1| peptide chain release factor 2 [Francisella tularensis subsp.
tularensis MA00-2987]
gi|377826688|gb|AFB79936.1| Peptide chain release factor 2 [Francisella tularensis subsp.
tularensis TI0902]
gi|377828233|gb|AFB78312.1| Peptide chain release factor 2 [Francisella tularensis subsp.
tularensis TIGB03]
Length = 325
Score = 41.2 bits (95), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTD 63
+RH S AS +F ++D +I+ D++ R SG GGQ V KT++ V +THIPT+
Sbjct: 172 KRHTSFAS-VFISPEVDDDIDIEINPTDLRVDTYRASGAGGQHVNKTDSAVRITHIPTN 229
>gi|421754807|ref|ZP_16191771.1| peptide chain release factor 2 [Francisella tularensis subsp.
tularensis 80700075]
gi|409090287|gb|EKM90308.1| peptide chain release factor 2 [Francisella tularensis subsp.
tularensis 80700075]
Length = 308
Score = 41.2 bits (95), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTD 63
+RH S AS +F ++D +I+ D++ R SG GGQ V KT++ V +THIPT+
Sbjct: 155 KRHTSFAS-VFISPEVDDDIDIEINPTDLRVDTYRASGAGGQHVNKTDSAVRITHIPTN 212
>gi|296119521|ref|ZP_06838079.1| peptide chain release factor 1 [Corynebacterium ammoniagenes DSM
20306]
gi|295967404|gb|EFG80671.1| peptide chain release factor 1 [Corynebacterium ammoniagenes DSM
20306]
Length = 358
Score = 41.2 bits (95), Expect = 0.091, Method: Composition-based stats.
Identities = 19/35 (54%), Positives = 24/35 (68%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
IDEKD++ R SG GGQ V T++ V LTH+PT
Sbjct: 218 IDEKDLRVDVYRSSGKGGQGVNTTDSAVRLTHLPT 252
>gi|195973770|gb|ACG63450.1| peptide chain release factor 2 [Francisella philomiragia]
Length = 294
Score = 41.2 bits (95), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTD 63
+RH S AS +F ++D +I+ D++ R SG GGQ V KT++ V +THIPT+
Sbjct: 172 KRHTSFAS-VFISPEVDDDIDIEINPADLRVDTYRASGAGGQHVNKTDSAVRITHIPTN 229
>gi|195973766|gb|ACG63448.1| peptide chain release factor 2 [Francisella philomiragia]
Length = 294
Score = 41.2 bits (95), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTD 63
+RH S AS +F ++D +I+ D++ R SG GGQ V KT++ V +THIPT+
Sbjct: 172 KRHTSFAS-VFISPEVDDDIDIEINPADLRVDTYRASGAGGQHVNKTDSAVRITHIPTN 229
>gi|429752822|ref|ZP_19285658.1| putative peptide chain release factor H [Capnocytophaga sp. oral
taxon 326 str. F0382]
gi|429175650|gb|EKY17081.1| putative peptide chain release factor H [Capnocytophaga sp. oral
taxon 326 str. F0382]
Length = 230
Score = 40.8 bits (94), Expect = 0.092, Method: Composition-based stats.
Identities = 21/61 (34%), Positives = 32/61 (52%)
Query: 2 SIFRRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIP 61
S FR+ ++ ++LD + E+D+Q + R G GGQ V K N+ V TH+P
Sbjct: 82 STFRKFHQRSNWYIGVFELDQLQRQTFSERDVQFQTTRSQGNGGQNVNKVNSAVRATHLP 141
Query: 62 T 62
T
Sbjct: 142 T 142
>gi|339625258|ref|ZP_08661047.1| peptide chain release factor 1 [Fructobacillus fructosus KCTC 3544]
Length = 359
Score = 40.8 bits (94), Expect = 0.092, Method: Composition-based stats.
Identities = 19/35 (54%), Positives = 24/35 (68%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
ID KD++E R SG GGQ V KT++ + LTH PT
Sbjct: 217 IDPKDVREDVYRASGAGGQHVNKTSSAIRLTHEPT 251
>gi|325002820|ref|ZP_08123932.1| peptide chain release factor 1 [Pseudonocardia sp. P1]
Length = 358
Score = 40.8 bits (94), Expect = 0.092, Method: Composition-based stats.
Identities = 25/58 (43%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
R H S A L D D + +IDEKDI+ R SG GGQ+V T++ V +TH+P+
Sbjct: 193 RIHTSAAGVLVFP-DADETPDVEIDEKDIRVDVFRASGHGGQSVNTTDSAVRITHLPS 249
>gi|315924849|ref|ZP_07921066.1| peptide chain release factor RF2 [Pseudoramibacter alactolyticus
ATCC 23263]
gi|315621748|gb|EFV01712.1| peptide chain release factor RF2 [Pseudoramibacter alactolyticus
ATCC 23263]
Length = 369
Score = 40.8 bits (94), Expect = 0.092, Method: Composition-based stats.
Identities = 25/58 (43%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S AS L ++D S +I+ DI+ R SG GGQ V KT++ + +TH+PT
Sbjct: 209 RRHTSFAS-LDVTPEVDDSVEIEINPDDIRVDTYRSSGAGGQHVNKTSSAIRITHLPT 265
>gi|195973762|gb|ACG63446.1| peptide chain release factor 2 [Francisella philomiragia subsp.
philomiragia ATCC 25015]
gi|195973768|gb|ACG63449.1| peptide chain release factor 2 [Francisella philomiragia]
Length = 294
Score = 40.8 bits (94), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTD 63
+RH S AS +F ++D +I+ D++ R SG GGQ V KT++ V +THIPT+
Sbjct: 172 KRHTSFAS-VFISPEVDDDIDIEINPADLRVDTYRASGAGGQHVNKTDSAVRITHIPTN 229
>gi|188534903|ref|YP_001908700.1| peptide chain release factor 2 [Erwinia tasmaniensis Et1/99]
gi|188029945|emb|CAO97829.1| Putative peptide chain release factor 2 [Erwinia tasmaniensis
Et1/99]
Length = 300
Score = 40.8 bits (94), Expect = 0.092, Method: Composition-based stats.
Identities = 24/59 (40%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTD 63
RRH S SS+F ++D + +I+ D++ R SG GGQ V KT + V +TH+PT+
Sbjct: 147 RRHTSF-SSVFIYPEVDDNIDIEINPADLRIDVYRASGAGGQHVNKTESAVRITHLPTN 204
>gi|392542982|ref|ZP_10290119.1| peptide chain release factor 2 [Pseudoalteromonas piscicida JCM
20779]
gi|409201543|ref|ZP_11229746.1| peptide chain release factor 2 [Pseudoalteromonas flavipulchra JG1]
Length = 248
Score = 40.8 bits (94), Expect = 0.093, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTDS 64
RRH S AS +F ++D + I+ D++ R SG GGQ V +T + V +TH+PT++
Sbjct: 95 RRHTSFAS-VFVYPEIDDNIEIDINPADLRIDVYRASGAGGQHVNRTESAVRITHLPTNT 153
>gi|350569217|ref|ZP_08937613.1| peptide chain release factor RF1 [Propionibacterium avidum ATCC
25577]
gi|348660035|gb|EGY76745.1| peptide chain release factor RF1 [Propionibacterium avidum ATCC
25577]
Length = 372
Score = 40.8 bits (94), Expect = 0.093, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Query: 19 DLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
D+D ++V ID D++ R SGPGGQ V T++ V LTH+PT
Sbjct: 218 DVDETEV-DIDPADVRVDVYRSSGPGGQGVNTTDSAVRLTHLPT 260
>gi|427414371|ref|ZP_18904561.1| peptide chain release factor 2 [Veillonella ratti ACS-216-V-Col6b]
gi|425714747|gb|EKU77750.1| peptide chain release factor 2 [Veillonella ratti ACS-216-V-Col6b]
Length = 330
Score = 40.8 bits (94), Expect = 0.094, Method: Composition-based stats.
Identities = 22/58 (37%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S A+ ++D + +D KD++ R SG GGQ + KT++ + +THIPT
Sbjct: 172 RRHTSFAAVDVMP-EIDDTVDIHLDMKDVRVDTYRASGAGGQHINKTDSAIRMTHIPT 228
>gi|410612434|ref|ZP_11323512.1| peptide chain release factor 2 [Glaciecola psychrophila 170]
gi|410167976|dbj|GAC37401.1| peptide chain release factor 2 [Glaciecola psychrophila 170]
Length = 349
Score = 40.8 bits (94), Expect = 0.094, Method: Composition-based stats.
Identities = 24/59 (40%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTD 63
RRH S AS+ F ++D +ID D++ R SG GGQ V +T++ V +TH PT+
Sbjct: 196 RRHTSFASA-FAYPEVDDDIEIEIDPSDLRIDTYRASGAGGQHVNRTDSAVRITHEPTN 253
>gi|359426085|ref|ZP_09217172.1| peptide chain release factor 2 [Gordonia amarae NBRC 15530]
gi|358238562|dbj|GAB06754.1| peptide chain release factor 2 [Gordonia amarae NBRC 15530]
Length = 371
Score = 40.8 bits (94), Expect = 0.094, Method: Composition-based stats.
Identities = 19/35 (54%), Positives = 24/35 (68%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
I E D++ R SGPGGQ+V T++ V LTHIPT
Sbjct: 235 IAETDLRVDVYRSSGPGGQSVNTTDSAVRLTHIPT 269
>gi|167626878|ref|YP_001677378.1| peptide chain release factor 2 [Francisella philomiragia subsp.
philomiragia ATCC 25017]
gi|167596879|gb|ABZ86877.1| peptide chain release factor 2 [Francisella philomiragia subsp.
philomiragia ATCC 25017]
Length = 346
Score = 40.8 bits (94), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTD 63
+RH S AS +F ++D +I+ D++ R SG GGQ V KT++ V +THIPT+
Sbjct: 193 KRHTSFAS-VFISPEVDDDIDIEINPADLRVDTYRASGAGGQHVNKTDSAVRITHIPTN 250
>gi|27379419|ref|NP_770948.1| peptide chain release factor 2 [Bradyrhizobium japonicum USDA 110]
gi|27352570|dbj|BAC49573.1| peptide chain release factor 2 [Bradyrhizobium japonicum USDA 110]
Length = 322
Score = 40.8 bits (94), Expect = 0.094, Method: Composition-based stats.
Identities = 27/59 (45%), Positives = 34/59 (57%), Gaps = 3/59 (5%)
Query: 5 RRHLSLAS-SLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S +S +F D D K+ I E D++ +R G GGQ V KT + V LTHIPT
Sbjct: 156 RRHTSFSSVQVFPVID-DSIKI-DIKESDVRVDTMRSGGAGGQHVNKTESAVRLTHIPT 212
>gi|374583718|ref|ZP_09656812.1| peptide chain release factor 2 [Desulfosporosinus youngiae DSM
17734]
gi|374419800|gb|EHQ92235.1| peptide chain release factor 2 [Desulfosporosinus youngiae DSM
17734]
Length = 368
Score = 40.8 bits (94), Expect = 0.094, Method: Composition-based stats.
Identities = 23/59 (38%), Positives = 35/59 (59%), Gaps = 2/59 (3%)
Query: 5 RRHLSLAS-SLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S AS + + D ++P ID +D++ R G GGQ V KT++ + +TH+PT
Sbjct: 210 RRHTSFASVDVIPEVAEDNDEIP-IDAEDLRIDTYRSGGAGGQHVNKTDSAIRITHLPT 267
>gi|365825155|ref|ZP_09367113.1| peptide chain release factor 1 [Actinomyces graevenitzii C83]
gi|365258530|gb|EHM88536.1| peptide chain release factor 1 [Actinomyces graevenitzii C83]
Length = 363
Score = 40.8 bits (94), Expect = 0.094, Method: Composition-based stats.
Identities = 23/58 (39%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
R H S A+ +F ++D +ID D++ R SGPGGQ+V T++ V +TH+PT
Sbjct: 200 RVHTS-AAGVFVMPEVDDPGEIEIDPNDLRIDVFRSSGPGGQSVNTTDSAVRITHLPT 256
>gi|302380960|ref|ZP_07269421.1| peptide chain release factor 2 [Finegoldia magna ACS-171-V-Col3]
gi|302311181|gb|EFK93201.1| peptide chain release factor 2 [Finegoldia magna ACS-171-V-Col3]
Length = 329
Score = 40.8 bits (94), Expect = 0.094, Method: Composition-based stats.
Identities = 25/59 (42%), Positives = 36/59 (61%), Gaps = 3/59 (5%)
Query: 5 RRHLSLAS-SLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S AS +F + ++ +ID+KD++ R SG GGQ V T++ V +THIPT
Sbjct: 176 RRHTSFASVDVFPEIKDNHDI--QIDDKDLKIDTYRASGAGGQHVNMTDSAVRITHIPT 232
>gi|291326803|ref|ZP_06125920.2| peptide chain release factor 2 [Providencia rettgeri DSM 1131]
gi|291312658|gb|EFE53111.1| peptide chain release factor 2 [Providencia rettgeri DSM 1131]
Length = 320
Score = 40.8 bits (94), Expect = 0.094, Method: Composition-based stats.
Identities = 25/59 (42%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTD 63
RRH S SS F ++D +I+ D++ R SG GGQ V KT + V +THIPT+
Sbjct: 167 RRHTSF-SSAFIYPEVDDDIDIEINPADLRIDVYRASGAGGQHVNKTESAVRITHIPTN 224
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.320 0.136 0.392
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,009,840,317
Number of Sequences: 23463169
Number of extensions: 31703148
Number of successful extensions: 78360
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 4949
Number of HSP's successfully gapped in prelim test: 703
Number of HSP's that attempted gapping in prelim test: 73380
Number of HSP's gapped (non-prelim): 5675
length of query: 64
length of database: 8,064,228,071
effective HSP length: 36
effective length of query: 28
effective length of database: 7,219,553,987
effective search space: 202147511636
effective search space used: 202147511636
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 69 (31.2 bits)