BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy2492
(162 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|307197489|gb|EFN78723.1| Uncharacterized protein C12orf65-like protein [Harpegnathos
saltator]
Length = 165
Score = 141 bits (355), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 67/111 (60%), Positives = 89/111 (80%)
Query: 47 YSTIPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTA 106
YS +PK++E D++E+FVRGSGPGGQA KTNN VVL H PTGIV+KCH++RSL +N+K A
Sbjct: 52 YSNLPKLEEADLKEQFVRGSGPGGQATNKTNNAVVLKHKPTGIVVKCHETRSLWDNQKRA 111
Query: 107 RELLVAQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKLDALKKAWKERE 157
RELLV + D +N E S+ AQIR I +K+RA +E K++KL +KKA++ERE
Sbjct: 112 RELLVTKLDNLLNKEHSIEAQIRAIQQKQRACKECKRKKLAEMKKAFQERE 162
>gi|312370878|gb|EFR19185.1| hypothetical protein AND_22936 [Anopheles darlingi]
Length = 225
Score = 140 bits (354), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 74/153 (48%), Positives = 102/153 (66%), Gaps = 8/153 (5%)
Query: 5 IVMWPMRDRNLAGIRLLESQVTITRELRNDGYHRNLVSNIDIYSTIPKIDEKDIQERFVR 64
+++WP +R + TIT G R +ID S +P + E D++E FVR
Sbjct: 74 LLLWPT-----IAVRASTATTTITNAY--SGGWRMFSKSID-NSRVPVLQEDDLEESFVR 125
Query: 65 GSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVAQWDVQVNGEDSL 124
GSGPGGQ+VAKTNN VVLTH PTG+V++CH SRSL ENR+ AR+LLV + D +NGE S+
Sbjct: 126 GSGPGGQSVAKTNNKVVLTHKPTGLVVQCHTSRSLFENRRIARQLLVTKLDQLINGEQSV 185
Query: 125 NAQIRRIDEKRRATQEQKKRKLDALKKAWKERE 157
AQ +R+D++++ ++K +L A KKAWKERE
Sbjct: 186 EAQRQRLDQRKQTEAARRKMRLQAKKKAWKERE 218
>gi|332030644|gb|EGI70332.1| Uncharacterized protein C12orf65-like protein [Acromyrmex
echinatior]
Length = 163
Score = 134 bits (338), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 64/128 (50%), Positives = 95/128 (74%), Gaps = 5/128 (3%)
Query: 30 ELRNDGYHRNLVSNIDIYSTIPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 89
++RN + R L YS +PK+DE D++E+F+RGSGPGGQA KTNN V+L H PTG+
Sbjct: 38 QVRNKSFKRYLD-----YSNVPKLDEIDLEEQFIRGSGPGGQATNKTNNAVLLKHKPTGL 92
Query: 90 VIKCHQSRSLSENRKTARELLVAQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKLDAL 149
V+KCH++RS +N+K ARE+LV + D +N E S+ AQI +++K +A +E K++KL+ +
Sbjct: 93 VVKCHETRSQWDNKKRAREILVTKLDNLLNKERSIEAQIHALEKKEQARKEYKRKKLNEM 152
Query: 150 KKAWKERE 157
KKA++ERE
Sbjct: 153 KKAFRERE 160
>gi|157131147|ref|XP_001662139.1| hypothetical protein AaeL_AAEL012009 [Aedes aegypti]
gi|157137107|ref|XP_001663890.1| hypothetical protein AaeL_AAEL013711 [Aedes aegypti]
gi|108869799|gb|EAT34024.1| AAEL013711-PA [Aedes aegypti]
gi|108871632|gb|EAT35857.1| AAEL012009-PA [Aedes aegypti]
Length = 142
Score = 134 bits (337), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 66/110 (60%), Positives = 84/110 (76%)
Query: 48 STIPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTAR 107
S +P + + D++E FVRGSGPGGQAVAKTNN VVLTH PTGIVI+CH SRSL +NR+ AR
Sbjct: 28 SKVPALRDDDLEETFVRGSGPGGQAVAKTNNKVVLTHKPTGIVIQCHSSRSLFKNREEAR 87
Query: 108 ELLVAQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKLDALKKAWKERE 157
LLVA+ D NG+ S+ AQ RRID+K+ + +++ K +KKAWKERE
Sbjct: 88 RLLVAKLDELENGDQSVEAQQRRIDQKKHSEAARRRSKRQEMKKAWKERE 137
>gi|332373588|gb|AEE61935.1| unknown [Dendroctonus ponderosae]
Length = 138
Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 57/112 (50%), Positives = 89/112 (79%)
Query: 47 YSTIPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTA 106
YS +P ++E+D++E+ V+GSGPGGQ V+KT++C+VL HIPTGIV+KC ++RS+ +N+K A
Sbjct: 25 YSQVPALNEQDLEEKQVKGSGPGGQKVSKTSSCIVLKHIPTGIVVKCQETRSVLQNKKIA 84
Query: 107 RELLVAQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKLDALKKAWKERED 158
R L+ + D +NGE+S+ AQI+R++ K+R EQK+ KL+ LK+ WKE ++
Sbjct: 85 RLHLITKLDNTINGENSVEAQIKRLENKKRGCNEQKREKLNQLKQKWKELQN 136
>gi|307170845|gb|EFN62956.1| Uncharacterized protein C12orf65-like protein [Camponotus
floridanus]
Length = 138
Score = 133 bits (335), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 62/127 (48%), Positives = 95/127 (74%), Gaps = 5/127 (3%)
Query: 31 LRNDGYHRNLVSNIDIYSTIPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIV 90
+R+ Y R+L YS +PK+DE D++E+F+RGSGPGGQA KTNN V L H PTG+V
Sbjct: 14 VRSKSYKRHLD-----YSKVPKLDEADLEEKFIRGSGPGGQATNKTNNAVSLKHKPTGLV 68
Query: 91 IKCHQSRSLSENRKTARELLVAQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKLDALK 150
+KCH++RSL +N+K ARE+++ + D +N E S+ AQIR +++K+++ +E K+++L +K
Sbjct: 69 VKCHETRSLWDNKKRAREIMITKLDNLLNKEYSIEAQIRGLEKKQQSQKENKRKRLTEMK 128
Query: 151 KAWKERE 157
KA+ ERE
Sbjct: 129 KAFHERE 135
>gi|322801028|gb|EFZ21809.1| hypothetical protein SINV_15156 [Solenopsis invicta]
Length = 220
Score = 133 bits (334), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 58/111 (52%), Positives = 87/111 (78%)
Query: 47 YSTIPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTA 106
YS +PK++E D++E+F+RGSGPGGQA KTNN V+L H PTG ++KCH++RS +N+K A
Sbjct: 107 YSNVPKLNEADLEEQFIRGSGPGGQATNKTNNAVLLKHKPTGFIVKCHETRSQWDNKKRA 166
Query: 107 RELLVAQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKLDALKKAWKERE 157
RE+L+ + D +N E S+ AQIR ++EK++ +E K++K D +KKA++ERE
Sbjct: 167 REILITKLDNLLNKERSIEAQIRALEEKQQTRKEYKRKKRDEMKKAFRERE 217
>gi|189241033|ref|XP_971712.2| PREDICTED: similar to AGAP012195-PA [Tribolium castaneum]
Length = 132
Score = 132 bits (333), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 58/112 (51%), Positives = 87/112 (77%)
Query: 47 YSTIPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTA 106
YS +P++ E +++E+ VRGSGPGGQA KT+NCVVL H+PTG+V+KCH++RSL +NRK A
Sbjct: 19 YSRVPQLVESELEEQHVRGSGPGGQATNKTSNCVVLKHVPTGLVVKCHETRSLDQNRKKA 78
Query: 107 RELLVAQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKLDALKKAWKERED 158
R+ LV + D +NG+ S+ AQ+R I++K +E+K+ +L+ LK WK+RE+
Sbjct: 79 RQYLVTKLDNLLNGDQSVEAQMREIEKKNTLNKERKRERLNKLKAEWKKREN 130
>gi|270013378|gb|EFA09826.1| hypothetical protein TcasGA2_TC011973 [Tribolium castaneum]
Length = 179
Score = 132 bits (333), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 58/112 (51%), Positives = 87/112 (77%)
Query: 47 YSTIPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTA 106
YS +P++ E +++E+ VRGSGPGGQA KT+NCVVL H+PTG+V+KCH++RSL +NRK A
Sbjct: 66 YSRVPQLVESELEEQHVRGSGPGGQATNKTSNCVVLKHVPTGLVVKCHETRSLDQNRKKA 125
Query: 107 RELLVAQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKLDALKKAWKERED 158
R+ LV + D +NG+ S+ AQ+R I++K +E+K+ +L+ LK WK+RE+
Sbjct: 126 RQYLVTKLDNLLNGDQSVEAQMREIEKKNTLNKERKRERLNKLKAEWKKREN 177
>gi|357624655|gb|EHJ75351.1| hypothetical protein KGM_09231 [Danaus plexippus]
Length = 143
Score = 128 bits (322), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 64/111 (57%), Positives = 85/111 (76%)
Query: 47 YSTIPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTA 106
+S +PKI+E D+ E+FVRGSGPGG AV K +NCVVLTHIPTGIVIKCH SRS ENRK A
Sbjct: 30 FSKVPKINECDLTEQFVRGSGPGGSAVNKNSNCVVLTHIPTGIVIKCHTSRSQDENRKMA 89
Query: 107 RELLVAQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKLDALKKAWKERE 157
R++L+A+ D +NG++S+ +Q + I+E R E KK+K +K+ WK+RE
Sbjct: 90 RDMLIAKLDDIINGKNSVESQKKMIEENRFKKVEYKKKKRAEIKEKWKKRE 140
>gi|193599082|ref|XP_001946758.1| PREDICTED: probable peptide chain release factor C12orf65 homolog,
mitochondrial-like isoform 1 [Acyrthosiphon pisum]
gi|328703300|ref|XP_003242163.1| PREDICTED: probable peptide chain release factor C12orf65 homolog,
mitochondrial-like [Acyrthosiphon pisum]
gi|328703303|ref|XP_003242164.1| PREDICTED: probable peptide chain release factor C12orf65 homolog,
mitochondrial-like [Acyrthosiphon pisum]
Length = 150
Score = 126 bits (316), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 62/111 (55%), Positives = 80/111 (72%)
Query: 48 STIPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTAR 107
S +P I+E +++E FV+GSGPGG AV K NCVVL H PTGIVIKCH+SR + +NRK AR
Sbjct: 36 SKVPIINENELEEMFVKGSGPGGSAVNKNANCVVLKHKPTGIVIKCHESRCVEDNRKMAR 95
Query: 108 ELLVAQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKLDALKKAWKERED 158
E L + DV NG +S+ AQ + I EK+ A +E K++KL+ LKK W ERE
Sbjct: 96 EKLAIKLDVIENGNNSVEAQKKAIIEKKNAQKEWKRKKLETLKKDWIERES 146
>gi|195558953|ref|XP_002077323.1| GD20369 [Drosophila simulans]
gi|194202425|gb|EDX16001.1| GD20369 [Drosophila simulans]
Length = 146
Score = 125 bits (315), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 58/116 (50%), Positives = 84/116 (72%), Gaps = 1/116 (0%)
Query: 42 SNIDIYSTIPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSE 101
SN+D YS P + E DI+E F+RGSGPGGQAV KT+NCV L H+PT I +KCH R S+
Sbjct: 20 SNLD-YSRFPALQESDIEETFMRGSGPGGQAVNKTSNCVFLRHLPTNITVKCHTHRLASK 78
Query: 102 NRKTARELLVAQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKLDALKKAWKERE 157
NR AR+LL+ + DV +NGE S+ AQI+ ++++ + +++ KL +KK+W++RE
Sbjct: 79 NRVEARKLLLEKLDVHLNGEHSIAAQIKAQEQRKSTERRRRQEKLQEMKKSWQDRE 134
>gi|195334889|ref|XP_002034109.1| GM21684 [Drosophila sechellia]
gi|194126079|gb|EDW48122.1| GM21684 [Drosophila sechellia]
Length = 146
Score = 125 bits (315), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 58/116 (50%), Positives = 84/116 (72%), Gaps = 1/116 (0%)
Query: 42 SNIDIYSTIPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSE 101
SN+D YS P + E DI+E F+RGSGPGGQAV KT+NCV L H+PT I +KCH R S+
Sbjct: 20 SNLD-YSRFPALQESDIEETFMRGSGPGGQAVNKTSNCVFLRHLPTNITVKCHTHRLASK 78
Query: 102 NRKTARELLVAQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKLDALKKAWKERE 157
NR AR+LL+ + DV +NGE S+ AQI+ ++++ + +++ KL +KK+W++RE
Sbjct: 79 NRVEARKLLLEKLDVHLNGEHSIAAQIKAQEQRKSTERRRRQEKLQEMKKSWQDRE 134
>gi|195488245|ref|XP_002092233.1| GE11778 [Drosophila yakuba]
gi|194178334|gb|EDW91945.1| GE11778 [Drosophila yakuba]
Length = 146
Score = 125 bits (314), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 57/116 (49%), Positives = 84/116 (72%), Gaps = 1/116 (0%)
Query: 42 SNIDIYSTIPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSE 101
SN+D YS P + E DI+E F+RGSGPGGQAV KT+NCV L H+PT I +KCH R S+
Sbjct: 20 SNLD-YSRFPALQESDIEETFMRGSGPGGQAVNKTSNCVFLRHLPTNITVKCHTHRLASK 78
Query: 102 NRKTARELLVAQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKLDALKKAWKERE 157
NR AR+LL+ + DV +NGE S+ AQ++ ++++ + +++ KL +KK+W++RE
Sbjct: 79 NRVEARKLLLEKLDVHLNGEHSIAAQVKAQEQRKSTERRRRQEKLQEMKKSWQDRE 134
>gi|195121186|ref|XP_002005101.1| GI19248 [Drosophila mojavensis]
gi|193910169|gb|EDW09036.1| GI19248 [Drosophila mojavensis]
Length = 141
Score = 124 bits (312), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 59/119 (49%), Positives = 83/119 (69%), Gaps = 1/119 (0%)
Query: 40 LVSNIDI-YSTIPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRS 98
L SN + YS P + E DI+E +RGSGPGGQAV KTNNCV L H+PTGI +KCH R
Sbjct: 18 LASNAHLDYSRYPTLQESDIEETLMRGSGPGGQAVNKTNNCVFLRHLPTGITVKCHLHRL 77
Query: 99 LSENRKTARELLVAQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKLDALKKAWKERE 157
S+NR AR++L+ + DV +NGE S+ AQ + +D+K+ +++++ KL +KK W+ RE
Sbjct: 78 ASKNRIEARKILLEKLDVHLNGEKSIAAQQKALDQKKSTERKRRQGKLQEMKKNWQNRE 136
>gi|24654113|ref|NP_725560.1| CG30100 [Drosophila melanogaster]
gi|21627121|gb|AAM68513.1| CG30100 [Drosophila melanogaster]
gi|157816290|gb|ABV82139.1| AT22563p2 [Drosophila melanogaster]
Length = 146
Score = 124 bits (312), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 57/116 (49%), Positives = 84/116 (72%), Gaps = 1/116 (0%)
Query: 42 SNIDIYSTIPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSE 101
SN+D YS P + E DI+E F+RGSGPGGQAV KT+NCV L H+PT I +KCH R S+
Sbjct: 20 SNLD-YSRFPVLQESDIEETFMRGSGPGGQAVNKTSNCVFLRHLPTNITVKCHTHRLASK 78
Query: 102 NRKTARELLVAQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKLDALKKAWKERE 157
NR AR+LL+ + DV +NGE S+ AQ++ ++++ + +++ KL +KK+W++RE
Sbjct: 79 NRVEARKLLLEKLDVHLNGEHSIAAQVKAQEQRKSTERRRRQEKLQEMKKSWQDRE 134
>gi|170049046|ref|XP_001853980.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167870988|gb|EDS34371.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 142
Score = 124 bits (310), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 61/116 (52%), Positives = 87/116 (75%), Gaps = 1/116 (0%)
Query: 42 SNIDIYSTIPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSE 101
+ ID+ S +P + ++D++E FVRGSGPGGQ+VAKTNN VVLTH PTGIVI+CH SRSL +
Sbjct: 23 TTIDV-SKVPVLRDEDLEEAFVRGSGPGGQSVAKTNNKVVLTHKPTGIVIQCHSSRSLFK 81
Query: 102 NRKTARELLVAQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKLDALKKAWKERE 157
NR+ AR LL+ + D NG+ S+ AQ ++I+ K+ + ++K K LK++WK+RE
Sbjct: 82 NREEARRLLILKLDELENGDQSVEAQRQKIEAKKHSETTRRKMKRQELKRSWKDRE 137
>gi|195029889|ref|XP_001987804.1| GH22113 [Drosophila grimshawi]
gi|193903804|gb|EDW02671.1| GH22113 [Drosophila grimshawi]
Length = 148
Score = 124 bits (310), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 57/122 (46%), Positives = 84/122 (68%), Gaps = 1/122 (0%)
Query: 37 HRNLVSNIDI-YSTIPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQ 95
HR +N + YS P + E DI+E +RGSGPGGQAV KTNNCV L H+PTG+ +KCH
Sbjct: 17 HRLASNNAHLDYSRYPSLQESDIEETLMRGSGPGGQAVNKTNNCVFLRHLPTGLTVKCHL 76
Query: 96 SRSLSENRKTARELLVAQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKLDALKKAWKE 155
R S+NR AR++L+ + D +NGE S+ AQ++ D+K+ + +++++ KL +KK W+
Sbjct: 77 HRLASKNRIEARKILLDKLDAHLNGEQSIAAQLKVFDQKKSSERKRRQGKLQEMKKMWQS 136
Query: 156 RE 157
RE
Sbjct: 137 RE 138
>gi|332375198|gb|AEE62740.1| unknown [Dendroctonus ponderosae]
Length = 139
Score = 124 bits (310), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 55/123 (44%), Positives = 88/123 (71%), Gaps = 1/123 (0%)
Query: 36 YHRNLVSNIDIYSTIPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQ 95
++ ++ ID+ + P +DE D++E+ +RGSGPGG ++ T +CV+L HIPTG+V+KC +
Sbjct: 16 WYSSMRKQIDL-TCFPTLDECDLEEQHIRGSGPGGSKISTTCSCVLLKHIPTGLVVKCQE 74
Query: 96 SRSLSENRKTARELLVAQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKLDALKKAWKE 155
+R L +NRK AR L+ + D+ +NGE+S+ AQ R+ R+A+ +QKK K+ LK+ WKE
Sbjct: 75 TRFLEQNRKRARLNLLTKLDIHLNGENSVQAQTARLQANRKASMDQKKEKIRELKRMWKE 134
Query: 156 RED 158
RE+
Sbjct: 135 REN 137
>gi|194757281|ref|XP_001960893.1| GF13589 [Drosophila ananassae]
gi|190622191|gb|EDV37715.1| GF13589 [Drosophila ananassae]
Length = 141
Score = 123 bits (309), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 60/112 (53%), Positives = 82/112 (73%), Gaps = 2/112 (1%)
Query: 47 YSTIPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTA 106
YS P + E DI+E F RGSGPGGQAV KT+NCV L H+PT I IKCH R S+NR A
Sbjct: 26 YSRYPTLQESDIEETFTRGSGPGGQAVNKTSNCVFLRHLPTNITIKCHTHRLASKNRVEA 85
Query: 107 RELLVAQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKR-KLDALKKAWKERE 157
R+LL+ + D +NGE+S+ AQI ++ E+R++T+ ++++ KL LKK W+ERE
Sbjct: 86 RKLLLEKLDAHLNGENSIAAQI-KVQEQRKSTERRRRQNKLQELKKNWQERE 136
>gi|195150095|ref|XP_002015990.1| GL10726 [Drosophila persimilis]
gi|194109837|gb|EDW31880.1| GL10726 [Drosophila persimilis]
Length = 181
Score = 123 bits (308), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 56/117 (47%), Positives = 83/117 (70%), Gaps = 1/117 (0%)
Query: 41 VSNIDIYSTIPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLS 100
+N+D YS PK+ E +I+E F+RGSGPGGQAV KT+NCV L H+PT I IKCH R S
Sbjct: 58 TANLD-YSRYPKLQESEIEETFMRGSGPGGQAVNKTSNCVFLRHLPTNITIKCHTHRLAS 116
Query: 101 ENRKTARELLVAQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKLDALKKAWKERE 157
+NR AR+LL+ + D NGE+S+ AQI+ +++++ + +++ K+ +K W+ERE
Sbjct: 117 KNRVEARKLLLDKLDAHFNGENSIAAQIKVLEQRKSTERRRRQGKMQEMKTRWQERE 173
>gi|198456857|ref|XP_001360468.2| GA15649 [Drosophila pseudoobscura pseudoobscura]
gi|198135777|gb|EAL25043.2| GA15649 [Drosophila pseudoobscura pseudoobscura]
Length = 181
Score = 122 bits (307), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 56/117 (47%), Positives = 82/117 (70%), Gaps = 1/117 (0%)
Query: 41 VSNIDIYSTIPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLS 100
+N+D YS PK+ E +I+E F+RGSGPGGQAV KT+NCV L H+PT I IKCH R S
Sbjct: 58 TANLD-YSRYPKLQESEIEETFMRGSGPGGQAVNKTSNCVFLRHLPTNITIKCHTHRLAS 116
Query: 101 ENRKTARELLVAQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKLDALKKAWKERE 157
+NR AR+LL+ + D NGE+S+ AQI+ ++ ++ + +++ K+ +K W+ERE
Sbjct: 117 KNRVEARKLLLDKLDAHFNGENSIAAQIKVLEHRKSTERRRRQGKMQEMKTRWQERE 173
>gi|118792472|ref|XP_320337.3| AGAP012195-PA [Anopheles gambiae str. PEST]
gi|116116915|gb|EAA00473.4| AGAP012195-PA [Anopheles gambiae str. PEST]
Length = 151
Score = 122 bits (306), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 65/120 (54%), Positives = 92/120 (76%)
Query: 38 RNLVSNIDIYSTIPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSR 97
R +S + +S +P + ++D++E FVRGSGPGGQAVAKTNN VVLTH PTGIV++CH +R
Sbjct: 25 RRCLSKVVDHSRLPVLRDEDLEESFVRGSGPGGQAVAKTNNKVVLTHKPTGIVVQCHTTR 84
Query: 98 SLSENRKTARELLVAQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKLDALKKAWKERE 157
SL ENR+ AR++L+ + D NG+ S+ AQ++RI+ K++ ++K+KL A KKAWKERE
Sbjct: 85 SLFENRREARKMLIGKLDQLYNGDQSVEAQLQRIEAKKQTETARRKQKLQAKKKAWKERE 144
>gi|194882555|ref|XP_001975376.1| GG20592 [Drosophila erecta]
gi|190658563|gb|EDV55776.1| GG20592 [Drosophila erecta]
Length = 148
Score = 122 bits (306), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 56/116 (48%), Positives = 83/116 (71%), Gaps = 1/116 (0%)
Query: 42 SNIDIYSTIPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSE 101
SN+D YS P + E DI+E F+RGSGPGGQAV KT+NCV L H+PT I +KCH R S+
Sbjct: 20 SNLD-YSRFPALQESDIEETFMRGSGPGGQAVNKTSNCVFLRHLPTNITVKCHTHRLASK 78
Query: 102 NRKTARELLVAQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKLDALKKAWKERE 157
NR AR+LL+ + DV +NGE S+ Q++ ++++ + +++ KL +KK+W++RE
Sbjct: 79 NRVEARKLLLEKLDVHLNGEHSIATQVKAQEQRKSTERRRRQEKLLEMKKSWQDRE 134
>gi|195382982|ref|XP_002050205.1| GJ20325 [Drosophila virilis]
gi|195404316|ref|XP_002060447.1| GJ15534 [Drosophila virilis]
gi|194145002|gb|EDW61398.1| GJ20325 [Drosophila virilis]
gi|194156312|gb|EDW71496.1| GJ15534 [Drosophila virilis]
Length = 142
Score = 122 bits (306), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 55/111 (49%), Positives = 79/111 (71%)
Query: 47 YSTIPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTA 106
YS P + E DI+E +RGSGPGGQAV KTNNCV L H+PTGI +KCH R S+NR A
Sbjct: 26 YSRYPSLQESDIEETLLRGSGPGGQAVNKTNNCVFLRHLPTGITVKCHLHRLASKNRIEA 85
Query: 107 RELLVAQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKLDALKKAWKERE 157
R++L+ + D +NGE S+ AQ + +D+K+ + +++++ KL +KK W+ RE
Sbjct: 86 RKILLDKLDAHLNGEQSIAAQQKVLDQKKSSERKRRQGKLQEMKKTWQSRE 136
>gi|350412608|ref|XP_003489703.1| PREDICTED: probable peptide chain release factor C12orf65 homolog,
mitochondrial-like [Bombus impatiens]
Length = 172
Score = 122 bits (305), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 70/139 (50%), Positives = 94/139 (67%), Gaps = 9/139 (6%)
Query: 20 LLESQVTITRELRNDGYHRNLVSNIDIYSTIPKIDEKDIQERFVRGSGPGGQAVAKTNNC 79
LL SQ +++R Y+R L YS +P+++E D+QE+ VRGSGPGGQA KTNN
Sbjct: 41 LLNSQ----KQIRYKSYNRFLD-----YSKVPRLEENDLQEQHVRGSGPGGQATNKTNNA 91
Query: 80 VVLTHIPTGIVIKCHQSRSLSENRKTARELLVAQWDVQVNGEDSLNAQIRRIDEKRRATQ 139
V+L H PTG+VIKCHQ+RSL +NR ARE+L+ + D VNG DSL +Q R+ +K +
Sbjct: 92 VILKHKPTGLVIKCHQTRSLEQNRNIAREILLRKLDNLVNGLDSLESQQERLMKKDSIKK 151
Query: 140 EQKKRKLDALKKAWKERED 158
QKK+KL LK + ERE+
Sbjct: 152 RQKKKKLADLKNKFMEREN 170
>gi|224924358|gb|ACN69129.1| mitochondrial polypeptide chain release factor [Stomoxys
calcitrans]
Length = 183
Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 51/108 (47%), Positives = 81/108 (75%)
Query: 47 YSTIPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTA 106
YS P ++E+D++E F RGSGPGGQA+ KT+NCV+L H+PT IV+KCH RS +NR A
Sbjct: 56 YSRYPTLNEEDLEETFTRGSGPGGQALNKTSNCVLLRHLPTNIVVKCHIHRSAQKNRVEA 115
Query: 107 RELLVAQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKLDALKKAWK 154
R++L+ + D Q+NGE S+ +Q+++++ K+ A ++++ KL +K+ WK
Sbjct: 116 RKILLEKLDAQLNGEYSIQSQLKQLENKKSAERKRRXTKLQEMKQKWK 163
>gi|346474116|gb|AEO36902.1| hypothetical protein [Amblyomma maculatum]
Length = 163
Score = 119 bits (298), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 56/110 (50%), Positives = 81/110 (73%)
Query: 48 STIPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTAR 107
S +P ++E+D+ E+FV GSGPGGQAV K +NCVVL H PTGIV++CH++R L ENRK AR
Sbjct: 42 SKVPVLNEEDLVEQFVHGSGPGGQAVNKLSNCVVLCHTPTGIVVRCHEARLLHENRKLAR 101
Query: 108 ELLVAQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKLDALKKAWKERE 157
++L+ + D +NG+ S+ AQ RI +++R ++K KL LKK + ER+
Sbjct: 102 KMLLEKLDDHINGDMSVAAQKLRIKKEKRRKLDRKNEKLRELKKQFMERQ 151
>gi|380018586|ref|XP_003693208.1| PREDICTED: probable peptide chain release factor C12orf65 homolog,
mitochondrial-like [Apis florea]
Length = 148
Score = 118 bits (296), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 62/130 (47%), Positives = 94/130 (72%), Gaps = 5/130 (3%)
Query: 29 RELRNDGYHRNLVSNIDIYSTIPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTG 88
+++R Y R L YS +PK++E D+QE+FV+GSGPGGQA KT+N +VL H PTG
Sbjct: 22 KQIRYKSYKRFLD-----YSRVPKLEESDLQEQFVKGSGPGGQATNKTSNAIVLKHKPTG 76
Query: 89 IVIKCHQSRSLSENRKTARELLVAQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKLDA 148
+V+KCH++RSL +NRK AR++L+ + D VNG++SL Q ++ ++ ++QKK+KL+
Sbjct: 77 LVVKCHETRSLDQNRKIARKILLTRLDNLVNGQNSLQNQKEQLMKRDSIKKKQKKKKLED 136
Query: 149 LKKAWKERED 158
LK A+ ERE+
Sbjct: 137 LKNAFVEREN 146
>gi|427783107|gb|JAA57005.1| Putative translational termination [Rhipicephalus pulchellus]
Length = 163
Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 66/158 (41%), Positives = 96/158 (60%), Gaps = 7/158 (4%)
Query: 1 MMIKIVMWPMRDRNLAGIRLLESQVTITRELR-NDGYHRNLVSNIDIYSTIPKIDEKDIQ 59
M+ +V R G+R L + + G HR ID S +P + E+D+
Sbjct: 1 MLAGLVGTAGRQTLTGGLRALCPRTVAAATIECTRGAHR-----ID-RSKVPVLKEEDVV 54
Query: 60 ERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVAQWDVQVN 119
E+F+ GSGPGGQAV K +NCV+L H PTGIV++CH+SR L ENRK AR++LV + D +N
Sbjct: 55 EQFIHGSGPGGQAVNKLSNCVMLCHTPTGIVVRCHESRLLHENRKLARKMLVEKLDEHLN 114
Query: 120 GEDSLNAQIRRIDEKRRATQEQKKRKLDALKKAWKERE 157
G+ S++AQ RI + +R ++K KL LK+ + ER+
Sbjct: 115 GDMSVSAQKLRIKQDKRRKLDRKNEKLRELKRQFLERQ 152
>gi|195426674|ref|XP_002061432.1| GK20726 [Drosophila willistoni]
gi|194157517|gb|EDW72418.1| GK20726 [Drosophila willistoni]
Length = 167
Score = 114 bits (286), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 52/107 (48%), Positives = 77/107 (71%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
E DI+E F+RGSGPGGQAV KT+NCV L H+PT + IKCH R S+NR AR+LL+
Sbjct: 55 FKESDIEETFMRGSGPGGQAVNKTSNCVFLRHLPTNLTIKCHTHRLASKNRIEARKLLLE 114
Query: 113 QWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKLDALKKAWKEREDR 159
+ D +NGE+S+ AQI+ ++++ +++++ KL +KK W+ERE +
Sbjct: 115 KLDEHLNGENSIAAQIKGQEQRKSLERKRRQNKLQEMKKKWQERESK 161
>gi|440898325|gb|ELR49850.1| hypothetical protein M91_19035, partial [Bos grunniens mutus]
Length = 165
Score = 112 bits (280), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 55/103 (53%), Positives = 79/103 (76%), Gaps = 2/103 (1%)
Query: 49 TIPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARE 108
T+ +DE++++E+FV+G GPGGQA KT+NCVVL H+P+GIV+KCHQ+RS+ +NRK AR
Sbjct: 51 TLLSLDERELEEQFVKGHGPGGQATNKTSNCVVLRHVPSGIVVKCHQTRSVDQNRKLARR 110
Query: 109 LLVAQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKLDALKK 151
+L + DV NGE+SL + +R EKR+ QE+KKR + L+K
Sbjct: 111 ILQEKVDVFYNGENSLVCREKREAEKRK--QERKKRAKETLEK 151
>gi|61886963|ref|XP_584238.1| PREDICTED: uncharacterized protein LOC507595 [Bos taurus]
gi|297484729|ref|XP_002694521.1| PREDICTED: uncharacterized protein LOC507595 [Bos taurus]
gi|296478551|tpg|DAA20666.1| TPA: chromosome 12 open reading frame 65 ortholog [Bos taurus]
Length = 172
Score = 112 bits (280), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 55/103 (53%), Positives = 79/103 (76%), Gaps = 2/103 (1%)
Query: 49 TIPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARE 108
T+ +DE++++E+FV+G GPGGQA KT+NCVVL H+P+GIV+KCHQ+RS+ +NRK AR
Sbjct: 51 TLLSLDERELEEQFVKGHGPGGQATNKTSNCVVLRHVPSGIVVKCHQTRSVDQNRKLARR 110
Query: 109 LLVAQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKLDALKK 151
+L + DV NGE+SL + +R EKR+ QE+KKR + L+K
Sbjct: 111 ILQEKVDVFYNGENSLVCREKREAEKRK--QERKKRAKETLEK 151
>gi|156552109|ref|XP_001605206.1| PREDICTED: probable peptide chain release factor C12orf65 homolog,
mitochondrial-like [Nasonia vitripennis]
Length = 159
Score = 112 bits (280), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 52/117 (44%), Positives = 88/117 (75%), Gaps = 1/117 (0%)
Query: 39 NLVSNIDIYSTIPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRS 98
++ S ID S +PKI+E D++ ++VRGSGPGGQ+ KT+N VV+ H+PTG+VIKCH++RS
Sbjct: 32 SMKSRIDT-SKVPKINEDDLEIQYVRGSGPGGQSTNKTSNNVVMKHLPTGLVIKCHETRS 90
Query: 99 LSENRKTARELLVAQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKLDALKKAWKE 155
++N K A+E L+ + D+ NGED++ Q +++ K+ + ++++++K ALK ++KE
Sbjct: 91 QTQNLKIAKEKLINKLDLLYNGEDAVENQKKKLLAKKTSEKQRRQKKRAALKASFKE 147
>gi|194042870|ref|XP_001928322.1| PREDICTED: probable peptide chain release factor C12orf65,
mitochondrial-like [Sus scrofa]
Length = 202
Score = 110 bits (274), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 54/99 (54%), Positives = 76/99 (76%), Gaps = 2/99 (2%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
+DE++++E+FV+G GPGGQA KT+NCVVL HIP+GIV+KCHQ+RS+ +NRK AR +L
Sbjct: 55 LDERELEEQFVKGHGPGGQATNKTSNCVVLRHIPSGIVVKCHQTRSVDQNRKLARRILQE 114
Query: 113 QWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKLDALKK 151
+ DV NGE+S + +R EKR+ QE+KKR + L+K
Sbjct: 115 KVDVFYNGENSPVYKEKREAEKRK--QERKKRAKETLEK 151
>gi|355735813|gb|AES11793.1| hypothetical protein [Mustela putorius furo]
Length = 153
Score = 108 bits (271), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 50/97 (51%), Positives = 74/97 (76%), Gaps = 2/97 (2%)
Query: 48 STIPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTAR 107
+P ++E+D++E+FV+G GPGGQA KT+NCVVL H+P+GIV+KCHQ+RS+ +NRK AR
Sbjct: 38 PALPPLEERDLEEQFVKGHGPGGQATNKTSNCVVLRHVPSGIVVKCHQTRSVDQNRKLAR 97
Query: 108 ELLVAQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKR 144
++L + D+ NGE+SL + ++ E R QE+KKR
Sbjct: 98 KILQEKLDIFYNGENSLVYKEKQ--EAERKKQERKKR 132
>gi|383847184|ref|XP_003699235.1| PREDICTED: probable peptide chain release factor C12orf65 homolog,
mitochondrial-like [Megachile rotundata]
Length = 162
Score = 108 bits (271), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 55/112 (49%), Positives = 85/112 (75%)
Query: 47 YSTIPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTA 106
Y+ +PK++E D++E+FV+GSGPGGQA KT+N VV+ H PTG+ +KCH++RSL +NRK A
Sbjct: 49 YTNVPKLEESDLEEQFVKGSGPGGQATNKTSNAVVIKHKPTGLTVKCHETRSLDKNRKIA 108
Query: 107 RELLVAQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKLDALKKAWKERED 158
RELL+ + D +NGE SL Q ++ +K ++QK++KL LK+ +++RE+
Sbjct: 109 RELLLTKLDNLINGERSLQNQELQLQQKDSLKRKQKQKKLARLKEEFQKREN 160
>gi|426247198|ref|XP_004017373.1| PREDICTED: probable peptide chain release factor C12orf65 homolog,
mitochondrial [Ovis aries]
Length = 177
Score = 108 bits (270), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 53/103 (51%), Positives = 78/103 (75%), Gaps = 2/103 (1%)
Query: 49 TIPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARE 108
T+ ++E +++E+FV+G GPGGQA KT+NCVVL H+P+GIV+KCHQ+RS+ +NRK AR
Sbjct: 51 TLLSLNEHELEEQFVKGHGPGGQATNKTSNCVVLRHVPSGIVVKCHQTRSVDQNRKLARR 110
Query: 109 LLVAQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKLDALKK 151
+L + DV NG++SL + +R EKR+ QE+KKR + L+K
Sbjct: 111 ILQEKVDVFYNGKNSLVCREKREAEKRK--QERKKRAKETLEK 151
>gi|449476622|ref|XP_002189696.2| PREDICTED: probable peptide chain release factor C12orf65 homolog,
mitochondrial [Taeniopygia guttata]
Length = 162
Score = 108 bits (269), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 57/105 (54%), Positives = 76/105 (72%), Gaps = 4/105 (3%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
I E D++E+FVRG GPGGQA KTNNCVVL HIP+GIV+KCHQ+RSL +NRK ARE+L
Sbjct: 53 ISEADLEEQFVRGDGPGGQATNKTNNCVVLKHIPSGIVVKCHQTRSLEKNRKIAREILQE 112
Query: 113 QWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKLDAL--KKAWKE 155
+ + GEDS + ++ EK++ QE+K+R + L KK +KE
Sbjct: 113 KVYLFYKGEDSDVFKEKKASEKQK--QEKKRRAKENLERKKLFKE 155
>gi|328791281|ref|XP_003251540.1| PREDICTED: peptide chain release factor 2-like [Apis mellifera]
Length = 178
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 56/112 (50%), Positives = 84/112 (75%)
Query: 47 YSTIPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTA 106
YS +PK++E D+QE+FV+G GPGGQA KT+N +VL H PTG+V+KCH++RSL +NRK A
Sbjct: 65 YSRVPKLEESDLQEQFVKGCGPGGQATNKTSNAIVLKHKPTGLVVKCHETRSLDQNRKIA 124
Query: 107 RELLVAQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKLDALKKAWKERED 158
R++L+ + D VN ++SL Q ++ ++ ++QKK+KL LK A+ ERE+
Sbjct: 125 RKILLTRLDNLVNDQNSLQNQKEQLMKRDSIKKKQKKKKLQDLKNAFVEREN 176
>gi|213514146|ref|NP_001134302.1| CL065 protein [Salmo salar]
gi|209732210|gb|ACI66974.1| C12orf65 homolog [Salmo salar]
Length = 166
Score = 106 bits (264), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 54/121 (44%), Positives = 83/121 (68%), Gaps = 8/121 (6%)
Query: 47 YSTIPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTA 106
Y +P ++E ++ E+FVRGSGPGGQA KT+NCVVL HIPTGIV+KCHQ+RS+ NRK A
Sbjct: 45 YIDLPVLNEDELDEQFVRGSGPGGQATNKTSNCVVLRHIPTGIVVKCHQTRSVETNRKRA 104
Query: 107 RELLVAQWDVQVNGEDS------LNAQIRRIDEKRRATQEQKKRKL--DALKKAWKERED 158
R+++ + +V GE+S + R+ D++++A + +K++L +AL +K +D
Sbjct: 105 RQIMREKLEVTYKGEESDILKNKKESIQRKQDKRKKANENLEKKRLFKEALMTDYKPGDD 164
Query: 159 R 159
R
Sbjct: 165 R 165
>gi|395513828|ref|XP_003761124.1| PREDICTED: probable peptide chain release factor C12orf65 homolog,
mitochondrial-like [Sarcophilus harrisii]
Length = 185
Score = 105 bits (263), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 47/84 (55%), Positives = 66/84 (78%), Gaps = 1/84 (1%)
Query: 40 LVSNIDIYSTIPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSL 99
+ S ++ ++ +P ++E D++E+FV+G GPGGQA KTNNCVVL HIPTGIV+KCHQ+RS+
Sbjct: 41 VASKMESHALLP-LNETDLEEQFVKGHGPGGQATNKTNNCVVLKHIPTGIVVKCHQTRSV 99
Query: 100 SENRKTARELLVAQWDVQVNGEDS 123
+NRK ARE+L + D+ GEDS
Sbjct: 100 DQNRKLAREILQGKVDLFYRGEDS 123
>gi|344297379|ref|XP_003420376.1| PREDICTED: hypothetical protein LOC100663086 [Loxodonta africana]
Length = 377
Score = 105 bits (263), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 45/76 (59%), Positives = 63/76 (82%)
Query: 49 TIPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARE 108
++P +DE +++E+FV+G GPGGQA KT+NCVVL HIP+GIV+KCHQ+RS+ +NRK AR+
Sbjct: 262 SLPALDESELEEQFVKGHGPGGQATNKTSNCVVLKHIPSGIVVKCHQTRSVDQNRKLARK 321
Query: 109 LLVAQWDVQVNGEDSL 124
+L + DV NGE+SL
Sbjct: 322 ILQEKVDVFCNGENSL 337
>gi|391344326|ref|XP_003746452.1| PREDICTED: probable peptide chain release factor C12orf65 homolog,
mitochondrial-like [Metaseiulus occidentalis]
Length = 207
Score = 105 bits (262), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 51/95 (53%), Positives = 70/95 (73%)
Query: 48 STIPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTAR 107
S +P I E+DI E+FV+GSGPGGQ+V KT NCVVL H PTG+V++CH+SR +NR+ AR
Sbjct: 68 SRVPVIGEEDIIEQFVKGSGPGGQSVNKTVNCVVLCHRPTGVVVRCHESRLQHQNRRMAR 127
Query: 108 ELLVAQWDVQVNGEDSLNAQIRRIDEKRRATQEQK 142
+LLV + D +NGE S+ Q RI+ +R+ EQ+
Sbjct: 128 QLLVEKVDDFINGEMSVRNQKIRIERERKIKAEQR 162
>gi|291239031|ref|XP_002739431.1| PREDICTED: C12orf65 homolog [Saccoglossus kowalevskii]
Length = 160
Score = 105 bits (261), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 53/118 (44%), Positives = 81/118 (68%), Gaps = 4/118 (3%)
Query: 45 DIYSTIPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRK 104
+I + +I+E ++ E+FVRGSGPGGQA KT+NCVVL HIP+GI +KCHQ+RS S+NR+
Sbjct: 43 NISKLLVEINEDELDEQFVRGSGPGGQATNKTSNCVVLKHIPSGITVKCHQTRSQSKNRE 102
Query: 105 TARELLVAQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKR----KLDALKKAWKERED 158
+R +L + DV G++S+ ++ +EKRR +++K + KL A K + E +D
Sbjct: 103 LSRRILREKLDVFYKGDESIIVIEKKKEEKRRQEKKRKSKVRLEKLKAFKASLNEDDD 160
>gi|410976508|ref|XP_003994662.1| PREDICTED: probable peptide chain release factor C12orf65 homolog,
mitochondrial [Felis catus]
Length = 167
Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 45/77 (58%), Positives = 62/77 (80%)
Query: 48 STIPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTAR 107
+ +P +DE D++E+FV+G GPGGQA KT+NCVVL HIP+GIV+KCHQ+RS+ +NRK AR
Sbjct: 51 ALLPPLDESDLEEQFVKGHGPGGQATNKTSNCVVLKHIPSGIVVKCHQTRSVDQNRKLAR 110
Query: 108 ELLVAQWDVQVNGEDSL 124
+L + D+ NGE+SL
Sbjct: 111 IILQEKVDIFYNGENSL 127
>gi|334327146|ref|XP_001375022.2| PREDICTED: probable peptide chain release factor C12orf65 homolog,
mitochondrial-like [Monodelphis domestica]
Length = 138
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 45/79 (56%), Positives = 64/79 (81%), Gaps = 1/79 (1%)
Query: 45 DIYSTIPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRK 104
D ++ +P ++E+D++E+FV+G GPGGQA KT+NCVVL HIP+GIV+KCHQ+RS+ +NRK
Sbjct: 13 DAHNLLP-LNERDLEEQFVKGHGPGGQATNKTSNCVVLKHIPSGIVVKCHQTRSVDQNRK 71
Query: 105 TARELLVAQWDVQVNGEDS 123
ARE+L + D+ GEDS
Sbjct: 72 LAREILQGKVDLFYRGEDS 90
>gi|55639161|ref|XP_509459.1| PREDICTED: probable peptide chain release factor C12orf65 homolog,
mitochondrial isoform 5 [Pan troglodytes]
gi|114647627|ref|XP_001169334.1| PREDICTED: probable peptide chain release factor C12orf65 homolog,
mitochondrial isoform 1 [Pan troglodytes]
gi|114647631|ref|XP_001169383.1| PREDICTED: probable peptide chain release factor C12orf65 homolog,
mitochondrial isoform 3 [Pan troglodytes]
gi|332840720|ref|XP_003314049.1| PREDICTED: probable peptide chain release factor C12orf65 homolog,
mitochondrial [Pan troglodytes]
gi|332840723|ref|XP_003314050.1| PREDICTED: probable peptide chain release factor C12orf65 homolog,
mitochondrial [Pan troglodytes]
gi|410047478|ref|XP_003952395.1| PREDICTED: probable peptide chain release factor C12orf65 homolog,
mitochondrial [Pan troglodytes]
gi|410206856|gb|JAA00647.1| chromosome 12 open reading frame 65 [Pan troglodytes]
gi|410206858|gb|JAA00648.1| chromosome 12 open reading frame 65 [Pan troglodytes]
gi|410253958|gb|JAA14946.1| chromosome 12 open reading frame 65 [Pan troglodytes]
gi|410253960|gb|JAA14947.1| chromosome 12 open reading frame 65 [Pan troglodytes]
gi|410253962|gb|JAA14948.1| chromosome 12 open reading frame 65 [Pan troglodytes]
gi|410253964|gb|JAA14949.1| chromosome 12 open reading frame 65 [Pan troglodytes]
gi|410291932|gb|JAA24566.1| chromosome 12 open reading frame 65 [Pan troglodytes]
gi|410291934|gb|JAA24567.1| chromosome 12 open reading frame 65 [Pan troglodytes]
gi|410291936|gb|JAA24568.1| chromosome 12 open reading frame 65 [Pan troglodytes]
gi|410291938|gb|JAA24569.1| chromosome 12 open reading frame 65 [Pan troglodytes]
gi|410336993|gb|JAA37443.1| chromosome 12 open reading frame 65 [Pan troglodytes]
Length = 166
Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 49/99 (49%), Positives = 74/99 (74%), Gaps = 5/99 (5%)
Query: 47 YSTIPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTA 106
Y + +DE +++E+FV+G GPGGQA KT+NCVVL HIP+GIV+KCHQ+RS+ +NRK A
Sbjct: 49 YPALLSLDENELEEQFVKGHGPGGQATNKTSNCVVLKHIPSGIVVKCHQTRSVDQNRKLA 108
Query: 107 RELLVAQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRK 145
R++L + DV NGE N+ + + EK+ A +++++RK
Sbjct: 109 RKILQEKVDVFYNGE---NSPVHK--EKQEAVKKKQERK 142
>gi|410923066|ref|XP_003975003.1| PREDICTED: probable peptide chain release factor C12orf65 homolog,
mitochondrial-like [Takifugu rubripes]
Length = 167
Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 48/103 (46%), Positives = 75/103 (72%), Gaps = 6/103 (5%)
Query: 50 IPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTAREL 109
+P ++E D++E+FVRGSGPGGQA KT+NCVVL HIP+G+V+KCHQ+RS+ NRK ARE+
Sbjct: 48 LPILNEDDLEEQFVRGSGPGGQATNKTSNCVVLKHIPSGVVVKCHQTRSVDINRKRAREI 107
Query: 110 LVAQWDVQVNGEDS------LNAQIRRIDEKRRATQEQKKRKL 146
+ + DV GE S +++R+ D++R+ + ++++L
Sbjct: 108 MKEKLDVLQKGELSEVILKKKESELRKQDKRRKVNENLERKRL 150
>gi|73995153|ref|XP_543374.2| PREDICTED: uncharacterized protein LOC486249 [Canis lupus
familiaris]
Length = 440
Score = 103 bits (257), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 43/76 (56%), Positives = 62/76 (81%)
Query: 49 TIPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARE 108
+P +DE +++E+FV+G GPGGQA KT+NCVVL HIP+GIV+KCHQ+RS+ +NRK AR+
Sbjct: 325 ALPLLDESELEEQFVKGHGPGGQATNKTSNCVVLKHIPSGIVVKCHQTRSVDQNRKLARQ 384
Query: 109 LLVAQWDVQVNGEDSL 124
+L + D+ NGE+S+
Sbjct: 385 ILQEKVDIFYNGENSI 400
>gi|395846771|ref|XP_003796067.1| PREDICTED: probable peptide chain release factor C12orf65 homolog,
mitochondrial [Otolemur garnettii]
Length = 183
Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 45/71 (63%), Positives = 59/71 (83%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
+DE D++E+FV+G GPGGQA KTNNCVVL HIP+GIVIKCHQ+RS+ +NRK AR++L
Sbjct: 55 LDENDLKEQFVKGHGPGGQATNKTNNCVVLKHIPSGIVIKCHQTRSVDQNRKLARKILQE 114
Query: 113 QWDVQVNGEDS 123
+ D+ NGE+S
Sbjct: 115 KVDIFYNGENS 125
>gi|348528334|ref|XP_003451673.1| PREDICTED: probable peptide chain release factor C12orf65 homolog,
mitochondrial-like [Oreochromis niloticus]
Length = 162
Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 53/101 (52%), Positives = 68/101 (67%), Gaps = 5/101 (4%)
Query: 50 IPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTAREL 109
+P + E +++E+FVRGSGPGGQA KT+NCVVL HIPTGIV+KCHQ+RS+ NRK ARE+
Sbjct: 44 LPVLVEDELEEQFVRGSGPGGQATNKTSNCVVLKHIPTGIVVKCHQTRSVDINRKRAREI 103
Query: 110 LVAQWDVQVNGEDS-----LNAQIRRIDEKRRATQEQKKRK 145
+ + DV GE S + R EKRR E +RK
Sbjct: 104 MREKLDVAYKGELSEVVTKKKESVLRKQEKRRKANENLERK 144
>gi|209736218|gb|ACI68978.1| C12orf65 homolog [Salmo salar]
Length = 166
Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 53/120 (44%), Positives = 81/120 (67%), Gaps = 8/120 (6%)
Query: 47 YSTIPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTA 106
Y +P ++E ++ E+FVRGSGPGGQA KT+NCVVL HIPTGIV+KCHQ+RS+ NRK A
Sbjct: 45 YIDLPVLNEDELDEQFVRGSGPGGQATNKTSNCVVLRHIPTGIVVKCHQTRSVETNRKRA 104
Query: 107 RELLVAQWDVQVNGEDS------LNAQIRRIDEKRRATQEQKKRKL--DALKKAWKERED 158
R ++ + +V GE+S + R+ D++++A + +K++L +AL +K +D
Sbjct: 105 RRIMREKLEVTYKGEESDILKNKKESIQRKQDKRKKANENLEKKRLFKEALMTDYKPGDD 164
>gi|402888030|ref|XP_003907380.1| PREDICTED: probable peptide chain release factor C12orf65 homolog,
mitochondrial isoform 1 [Papio anubis]
gi|402888032|ref|XP_003907381.1| PREDICTED: probable peptide chain release factor C12orf65 homolog,
mitochondrial isoform 2 [Papio anubis]
gi|402888034|ref|XP_003907382.1| PREDICTED: probable peptide chain release factor C12orf65 homolog,
mitochondrial isoform 3 [Papio anubis]
gi|402888036|ref|XP_003907383.1| PREDICTED: probable peptide chain release factor C12orf65 homolog,
mitochondrial isoform 4 [Papio anubis]
Length = 169
Score = 102 bits (254), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 44/77 (57%), Positives = 61/77 (79%)
Query: 47 YSTIPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTA 106
Y + +DE +++E+FV+G GPGGQA KT+NCVVL HIP+GIV+KCHQ+RS+ +NRK A
Sbjct: 52 YPALLSLDENELEEQFVKGHGPGGQATNKTSNCVVLKHIPSGIVVKCHQTRSVDQNRKLA 111
Query: 107 RELLVAQWDVQVNGEDS 123
R++L + DV NGE+S
Sbjct: 112 RKILQEKVDVFYNGENS 128
>gi|405957865|gb|EKC24043.1| Uncharacterized protein C12orf65-like protein [Crassostrea gigas]
Length = 372
Score = 102 bits (254), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 48/86 (55%), Positives = 67/86 (77%), Gaps = 2/86 (2%)
Query: 50 IPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTAREL 109
P+I E+D++E V+GSGPGGQ+V KT+NCVVL H P+GIV+KCH +RSL++NR+ AREL
Sbjct: 49 FPEILERDLEESIVKGSGPGGQSVNKTSNCVVLLHKPSGIVVKCHHTRSLAKNREIAREL 108
Query: 110 LVAQWDVQVNGEDSLNAQIRRIDEKR 135
L + D +NG++S AQ+ + EKR
Sbjct: 109 LQEKLDESINGKNSYLAQV--MQEKR 132
>gi|355564798|gb|EHH21298.1| hypothetical protein EGK_04319, partial [Macaca mulatta]
gi|355786636|gb|EHH66819.1| hypothetical protein EGM_03875, partial [Macaca fascicularis]
Length = 165
Score = 102 bits (253), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 44/77 (57%), Positives = 61/77 (79%)
Query: 47 YSTIPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTA 106
Y + +DE +++E+FV+G GPGGQA KT+NCVVL HIP+GIV+KCHQ+RS+ +NRK A
Sbjct: 48 YPALLSLDENELEEQFVKGHGPGGQATNKTSNCVVLKHIPSGIVVKCHQTRSVDQNRKLA 107
Query: 107 RELLVAQWDVQVNGEDS 123
R++L + DV NGE+S
Sbjct: 108 RKILQEKVDVFYNGENS 124
>gi|291414256|ref|XP_002723382.1| PREDICTED: hypothetical protein [Oryctolagus cuniculus]
Length = 165
Score = 102 bits (253), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 62/78 (79%)
Query: 47 YSTIPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTA 106
+ +P +DE +++E+FV+G GPGGQA KT+NCVVL H+P+GIV+KCHQ+RS+ +NRK A
Sbjct: 49 WPPLPPLDENELREQFVKGHGPGGQATNKTSNCVVLKHVPSGIVVKCHQTRSVDQNRKLA 108
Query: 107 RELLVAQWDVQVNGEDSL 124
R +L + DV +GE+SL
Sbjct: 109 RRILQEKVDVFYHGENSL 126
>gi|397481889|ref|XP_003812169.1| PREDICTED: probable peptide chain release factor C12orf65 homolog,
mitochondrial isoform 1 [Pan paniscus]
gi|397481891|ref|XP_003812170.1| PREDICTED: probable peptide chain release factor C12orf65 homolog,
mitochondrial isoform 2 [Pan paniscus]
gi|397481893|ref|XP_003812171.1| PREDICTED: probable peptide chain release factor C12orf65 homolog,
mitochondrial isoform 3 [Pan paniscus]
gi|397481895|ref|XP_003812172.1| PREDICTED: probable peptide chain release factor C12orf65 homolog,
mitochondrial isoform 4 [Pan paniscus]
gi|397481897|ref|XP_003812173.1| PREDICTED: probable peptide chain release factor C12orf65 homolog,
mitochondrial isoform 5 [Pan paniscus]
gi|426374551|ref|XP_004054135.1| PREDICTED: probable peptide chain release factor C12orf65 homolog,
mitochondrial isoform 1 [Gorilla gorilla gorilla]
gi|426374553|ref|XP_004054136.1| PREDICTED: probable peptide chain release factor C12orf65 homolog,
mitochondrial isoform 2 [Gorilla gorilla gorilla]
gi|426374555|ref|XP_004054137.1| PREDICTED: probable peptide chain release factor C12orf65 homolog,
mitochondrial isoform 3 [Gorilla gorilla gorilla]
gi|426374557|ref|XP_004054138.1| PREDICTED: probable peptide chain release factor C12orf65 homolog,
mitochondrial isoform 4 [Gorilla gorilla gorilla]
gi|426374559|ref|XP_004054139.1| PREDICTED: probable peptide chain release factor C12orf65 homolog,
mitochondrial isoform 5 [Gorilla gorilla gorilla]
gi|426374561|ref|XP_004054140.1| PREDICTED: probable peptide chain release factor C12orf65 homolog,
mitochondrial isoform 6 [Gorilla gorilla gorilla]
Length = 166
Score = 102 bits (253), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 44/77 (57%), Positives = 61/77 (79%)
Query: 47 YSTIPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTA 106
Y + +DE +++E+FV+G GPGGQA KT+NCVVL HIP+GIV+KCHQ+RS+ +NRK A
Sbjct: 49 YPALLSLDENELEEQFVKGHGPGGQATNKTSNCVVLKHIPSGIVVKCHQTRSVDQNRKLA 108
Query: 107 RELLVAQWDVQVNGEDS 123
R++L + DV NGE+S
Sbjct: 109 RKILQEKVDVFYNGENS 125
>gi|332254315|ref|XP_003276272.1| PREDICTED: probable peptide chain release factor C12orf65 homolog,
mitochondrial isoform 1 [Nomascus leucogenys]
gi|332254317|ref|XP_003276273.1| PREDICTED: probable peptide chain release factor C12orf65 homolog,
mitochondrial isoform 2 [Nomascus leucogenys]
gi|332254319|ref|XP_003276274.1| PREDICTED: probable peptide chain release factor C12orf65 homolog,
mitochondrial isoform 3 [Nomascus leucogenys]
gi|332254321|ref|XP_003276275.1| PREDICTED: probable peptide chain release factor C12orf65 homolog,
mitochondrial isoform 4 [Nomascus leucogenys]
gi|441630234|ref|XP_004089518.1| PREDICTED: probable peptide chain release factor C12orf65 homolog,
mitochondrial [Nomascus leucogenys]
gi|441630241|ref|XP_004089519.1| PREDICTED: probable peptide chain release factor C12orf65 homolog,
mitochondrial [Nomascus leucogenys]
Length = 166
Score = 102 bits (253), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 44/77 (57%), Positives = 61/77 (79%)
Query: 47 YSTIPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTA 106
Y + +DE +++E+FV+G GPGGQA KT+NCVVL HIP+GIV+KCHQ+RS+ +NRK A
Sbjct: 49 YPALLSLDENELEEQFVKGHGPGGQATNKTSNCVVLKHIPSGIVVKCHQTRSVDQNRKLA 108
Query: 107 RELLVAQWDVQVNGEDS 123
R++L + DV NGE+S
Sbjct: 109 RKILQEKVDVFYNGENS 125
>gi|22748627|ref|NP_689482.1| probable peptide chain release factor C12orf65, mitochondrial [Homo
sapiens]
gi|219879802|ref|NP_001137377.1| probable peptide chain release factor C12orf65, mitochondrial [Homo
sapiens]
gi|303304971|ref|NP_001181924.1| probable peptide chain release factor C12orf65, mitochondrial [Homo
sapiens]
gi|74733574|sp|Q9H3J6.1|CL065_HUMAN RecName: Full=Probable peptide chain release factor C12orf65,
mitochondrial; Flags: Precursor
gi|12002002|gb|AAG43144.1|AF061733_1 My030 protein [Homo sapiens]
gi|17390320|gb|AAH18145.1| Chromosome 12 open reading frame 65 [Homo sapiens]
gi|21755354|dbj|BAC04665.1| unnamed protein product [Homo sapiens]
gi|38382804|gb|AAH62329.1| Chromosome 12 open reading frame 65 [Homo sapiens]
gi|119618802|gb|EAW98396.1| hypothetical protein FLJ38663, isoform CRA_b [Homo sapiens]
gi|312152346|gb|ADQ32685.1| chromosome 12 open reading frame 65 [synthetic construct]
Length = 166
Score = 102 bits (253), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 44/77 (57%), Positives = 61/77 (79%)
Query: 47 YSTIPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTA 106
Y + +DE +++E+FV+G GPGGQA KT+NCVVL HIP+GIV+KCHQ+RS+ +NRK A
Sbjct: 49 YPALLSLDENELEEQFVKGHGPGGQATNKTSNCVVLKHIPSGIVVKCHQTRSVDQNRKLA 108
Query: 107 RELLVAQWDVQVNGEDS 123
R++L + DV NGE+S
Sbjct: 109 RKILQEKVDVFYNGENS 125
>gi|403281775|ref|XP_003932353.1| PREDICTED: probable peptide chain release factor C12orf65 homolog,
mitochondrial [Saimiri boliviensis boliviensis]
Length = 170
Score = 101 bits (252), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 44/77 (57%), Positives = 61/77 (79%)
Query: 47 YSTIPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTA 106
Y + +DE +++E+FV+G GPGGQA KT+NCVVL HIP+GIV+KCHQ+RS+ +NRK A
Sbjct: 49 YPALLSLDENELEEQFVKGHGPGGQATNKTSNCVVLKHIPSGIVVKCHQTRSVDQNRKLA 108
Query: 107 RELLVAQWDVQVNGEDS 123
R++L + DV NGE+S
Sbjct: 109 RKILQEKVDVFYNGENS 125
>gi|390353656|ref|XP_798467.3| PREDICTED: probable peptide chain release factor C12orf65 homolog,
mitochondrial-like [Strongylocentrotus purpuratus]
Length = 223
Score = 101 bits (252), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 45/86 (52%), Positives = 65/86 (75%)
Query: 46 IYSTIPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKT 105
I S +P + E++++E+FVRGSGPGGQA KT+NCVVL HIPTG+V+KCHQ+RS SEN+K
Sbjct: 92 IRSKLPDLKEEELEEQFVRGSGPGGQATNKTSNCVVLKHIPTGLVVKCHQTRSQSENQKI 151
Query: 106 ARELLVAQWDVQVNGEDSLNAQIRRI 131
AR L+ + D ++ + S +Q ++
Sbjct: 152 ARLLMKERLDQHLHADQSAISQYQQT 177
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 25/31 (80%)
Query: 46 IYSTIPKIDEKDIQERFVRGSGPGGQAVAKT 76
I S +P + E++++E+FVRGSGPGGQA KT
Sbjct: 36 IRSKLPDLKEEELEEQFVRGSGPGGQATNKT 66
>gi|297693340|ref|XP_002823976.1| PREDICTED: probable peptide chain release factor C12orf65 homolog,
mitochondrial isoform 3 [Pongo abelii]
gi|297693344|ref|XP_002823978.1| PREDICTED: probable peptide chain release factor C12orf65 homolog,
mitochondrial isoform 5 [Pongo abelii]
Length = 166
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 44/77 (57%), Positives = 61/77 (79%)
Query: 47 YSTIPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTA 106
Y + +DE +++E+FV+G GPGGQA KT+NCVVL HIP+GIV+KCHQ+RS+ +NRK A
Sbjct: 49 YPALLYLDENELEEQFVKGHGPGGQATNKTSNCVVLKHIPSGIVVKCHQTRSVDQNRKLA 108
Query: 107 RELLVAQWDVQVNGEDS 123
R++L + DV NGE+S
Sbjct: 109 RKILQEKVDVFYNGENS 125
>gi|154757477|gb|AAI51776.1| C17H12ORF65 protein [Bos taurus]
Length = 143
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 46/86 (53%), Positives = 66/86 (76%)
Query: 48 STIPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTAR 107
T+ +DE++++E+FV+G GPGGQA KT+NCVVL H+P+GIV+KCHQ+RS+ +NRK AR
Sbjct: 50 PTLLSLDERELEEQFVKGHGPGGQATNKTSNCVVLRHVPSGIVVKCHQTRSVDQNRKLAR 109
Query: 108 ELLVAQWDVQVNGEDSLNAQIRRIDE 133
+L + DV NGE+SL + +R E
Sbjct: 110 RILQEKVDVFYNGENSLVCREKREAE 135
>gi|449279303|gb|EMC86938.1| hypothetical protein A306_04532 [Columba livia]
Length = 162
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 45/76 (59%), Positives = 59/76 (77%)
Query: 48 STIPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTAR 107
S + + E +++E+FVRG GPGGQA KTNNCVVL HIP+GIV+KCHQ+RS+ +NRK AR
Sbjct: 48 SNLLGLTEAELKEQFVRGDGPGGQATNKTNNCVVLKHIPSGIVVKCHQTRSVEQNRKIAR 107
Query: 108 ELLVAQWDVQVNGEDS 123
E+L + D+ GEDS
Sbjct: 108 EILQEKVDLFYKGEDS 123
>gi|296213216|ref|XP_002753183.1| PREDICTED: probable peptide chain release factor C12orf65,
mitochondrial [Callithrix jacchus]
Length = 170
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 43/77 (55%), Positives = 61/77 (79%)
Query: 47 YSTIPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTA 106
Y + +DE +++E+FV+G GPGGQA KT+NCVVL HIP+GIV+KCHQ+RS+ +NRK A
Sbjct: 49 YPALLSLDENELEEQFVKGHGPGGQATNKTSNCVVLKHIPSGIVVKCHQTRSVDQNRKLA 108
Query: 107 RELLVAQWDVQVNGEDS 123
R++L + D+ NGE+S
Sbjct: 109 RKILQEKVDIFYNGENS 125
>gi|351698556|gb|EHB01475.1| hypothetical protein GW7_03140 [Heterocephalus glaber]
Length = 186
Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 42/77 (54%), Positives = 62/77 (80%)
Query: 47 YSTIPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTA 106
++++ +DE +++E+FV+G GPGGQA KT+NCVVL H+P+G+V+KCHQ+RS+ NRK A
Sbjct: 52 HTSLLPLDESELEEQFVKGHGPGGQATNKTSNCVVLKHLPSGLVVKCHQTRSVDHNRKLA 111
Query: 107 RELLVAQWDVQVNGEDS 123
R++L + DV NGEDS
Sbjct: 112 RKILQEKVDVFYNGEDS 128
>gi|187607772|ref|NP_001119948.1| uncharacterized protein LOC100004874 [Danio rerio]
gi|162416112|sp|A5WUX7.1|CL065_DANRE RecName: Full=Probable peptide chain release factor C12orf65
homolog, mitochondrial; Flags: Precursor
Length = 156
Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 50/107 (46%), Positives = 74/107 (69%), Gaps = 7/107 (6%)
Query: 50 IPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTAREL 109
+P + E++++E+FVRGSGPGGQA KT+NCVVL HIP+GIV+KCH++RS+ NRK ARE+
Sbjct: 39 LPVVHEEELEEQFVRGSGPGGQATNKTSNCVVLRHIPSGIVVKCHETRSVDLNRKRAREI 98
Query: 110 LVAQWDVQVNGEDS-----LNAQIRRIDEKRRATQE--QKKRKLDAL 149
L + +V GE+S +++ +KRR E +KKR+ +
Sbjct: 99 LREKLEVAYKGEESELLKMKKESMQKKQDKRRKVNENIEKKRRFKEM 145
>gi|189519733|ref|XP_001340041.2| PREDICTED: probable peptide chain release factor C12orf65 homolog,
mitochondrial [Danio rerio]
Length = 156
Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 50/107 (46%), Positives = 74/107 (69%), Gaps = 7/107 (6%)
Query: 50 IPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTAREL 109
+P + E++++E+FVRGSGPGGQA KT+NCVVL HIP+GIV+KCH++RS+ NRK ARE+
Sbjct: 39 LPVVHEEELEEQFVRGSGPGGQATNKTSNCVVLRHIPSGIVVKCHETRSVDLNRKRAREI 98
Query: 110 LVAQWDVQVNGEDS-----LNAQIRRIDEKRRATQE--QKKRKLDAL 149
L + +V GE+S +++ +KRR E +KKR+ +
Sbjct: 99 LREKLEVAYKGEESELLKMKKESMQKKQDKRRKVNENIEKKRRFKEM 145
>gi|354496365|ref|XP_003510297.1| PREDICTED: probable peptide chain release factor C12orf65 homolog,
mitochondrial-like [Cricetulus griseus]
Length = 180
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 43/77 (55%), Positives = 60/77 (77%)
Query: 47 YSTIPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTA 106
Y + + E +++E+FV+G GPGGQA KTNNCVVL H+P+GIV+KCHQ+RS+ +NRK A
Sbjct: 48 YPALLPLHESELEEQFVKGHGPGGQATNKTNNCVVLKHVPSGIVVKCHQTRSVDQNRKIA 107
Query: 107 RELLVAQWDVQVNGEDS 123
R++L + DV NGE+S
Sbjct: 108 RKILQEKVDVFYNGENS 124
>gi|197927088|ref|NP_001102535.2| uncharacterized protein LOC498179 [Rattus norvegicus]
gi|392352516|ref|XP_003751231.1| PREDICTED: probable peptide chain release factor C12orf65 homolog,
mitochondrial-like [Rattus norvegicus]
gi|195539878|gb|AAI68187.1| RGD1563482 protein [Rattus norvegicus]
Length = 181
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 42/77 (54%), Positives = 61/77 (79%)
Query: 47 YSTIPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTA 106
Y + ++E +++E+FV+G GPGGQA KT+NCVVL H+P+GIV+KCHQ+RS+ +NRK A
Sbjct: 49 YPALLPLNESELEEQFVKGHGPGGQATNKTSNCVVLKHVPSGIVVKCHQTRSVDQNRKMA 108
Query: 107 RELLVAQWDVQVNGEDS 123
R++L + DV NGE+S
Sbjct: 109 RKILQEKVDVFYNGENS 125
>gi|149063270|gb|EDM13593.1| rCG21417, isoform CRA_a [Rattus norvegicus]
Length = 220
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 42/77 (54%), Positives = 61/77 (79%)
Query: 47 YSTIPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTA 106
Y + ++E +++E+FV+G GPGGQA KT+NCVVL H+P+GIV+KCHQ+RS+ +NRK A
Sbjct: 88 YPALLPLNESELEEQFVKGHGPGGQATNKTSNCVVLKHVPSGIVVKCHQTRSVDQNRKMA 147
Query: 107 RELLVAQWDVQVNGEDS 123
R++L + DV NGE+S
Sbjct: 148 RKILQEKVDVFYNGENS 164
>gi|431912146|gb|ELK14284.1| hypothetical protein PAL_GLEAN10008800 [Pteropus alecto]
Length = 169
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 43/72 (59%), Positives = 60/72 (83%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
+DE +++E+FV+G GPGGQA KT+NCVVL HIP+G+V+KCHQ+RS+ +NRK AR++L
Sbjct: 40 LDESELEEQFVKGHGPGGQATNKTSNCVVLKHIPSGLVVKCHQTRSVDQNRKLARKILQE 99
Query: 113 QWDVQVNGEDSL 124
+ DV NGE+SL
Sbjct: 100 KVDVFYNGENSL 111
>gi|229368188|gb|ACQ59074.1| C12orf65 homolog [Anoplopoma fimbria]
Length = 169
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 47/103 (45%), Positives = 74/103 (71%), Gaps = 6/103 (5%)
Query: 50 IPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTAREL 109
+P +DE +++E+FVRGSGPGGQA KT NCVVL HIP+G V+KCHQ+RS+ NRK AR++
Sbjct: 51 LPVLDEDELEEQFVRGSGPGGQATNKTGNCVVLKHIPSGTVVKCHQTRSVDINRKRARDI 110
Query: 110 LVAQWDVQVNGEDS------LNAQIRRIDEKRRATQEQKKRKL 146
+ + DV GE S +++R+ +++R+A + ++++L
Sbjct: 111 MREKLDVVYKGELSEIIVKKKESELRKQEKRRKANENLERKRL 153
>gi|47226435|emb|CAG08451.1| unnamed protein product [Tetraodon nigroviridis]
Length = 156
Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 47/102 (46%), Positives = 74/102 (72%), Gaps = 6/102 (5%)
Query: 51 PKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELL 110
P ++E D++E+FVRGSGPGGQA KT+NCVVL HIP+GIV+KCHQ+RS+ NRK AR+++
Sbjct: 52 PVLNEDDLEEQFVRGSGPGGQATNKTSNCVVLKHIPSGIVVKCHQTRSVDINRKRARDIM 111
Query: 111 VAQWDVQVNGEDS------LNAQIRRIDEKRRATQEQKKRKL 146
+ DV GE S +++R+ D++++ + ++++L
Sbjct: 112 REKLDVLQKGELSEILVKKKESELRKQDKRKKVNENLERKRL 153
>gi|156374287|ref|XP_001629739.1| predicted protein [Nematostella vectensis]
gi|156216746|gb|EDO37676.1| predicted protein [Nematostella vectensis]
Length = 95
Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 54/99 (54%), Positives = 71/99 (71%), Gaps = 5/99 (5%)
Query: 47 YSTIPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTA 106
Y + K+ E+DI+ERFV+G G GGQ V KTNNCV L H+PTGI CHQ+RSL+ NR A
Sbjct: 1 YYHVVKLQEEDIEERFVKGWGKGGQKVNKTNNCVELRHVPTGI---CHQTRSLTRNRSIA 57
Query: 107 RELLVAQWDVQVNGEDSLNA-QIRRIDEKRRATQEQKKR 144
RELL+ Q D NG+DS A QI +I +KR+AT ++++
Sbjct: 58 RELLLNQLDQLYNGKDSKAAIQIAKI-KKRKATYARRRK 95
>gi|74198326|dbj|BAB28408.3| unnamed protein product [Mus musculus]
Length = 142
Score = 99.8 bits (247), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 42/77 (54%), Positives = 61/77 (79%)
Query: 47 YSTIPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTA 106
Y + ++E +++E+FV+G GPGGQA KT+NCVVL H+P+GIV+KCHQ+RS+ +NRK A
Sbjct: 52 YPALLPLNESELEEQFVKGHGPGGQATNKTSNCVVLKHVPSGIVVKCHQTRSVDQNRKIA 111
Query: 107 RELLVAQWDVQVNGEDS 123
R++L + DV NGE+S
Sbjct: 112 RKVLQEKVDVFYNGENS 128
>gi|326929619|ref|XP_003210956.1| PREDICTED: probable peptide chain release factor C12orf65,
mitochondrial-like [Meleagris gallopavo]
Length = 165
Score = 99.8 bits (247), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 74/122 (60%), Gaps = 21/122 (17%)
Query: 20 LLESQVTITRELRNDGYHRNLVSNIDIYSTIP------------------KIDEKDIQER 61
L E + LR+DG R+L+ + + +P ++ E +++E+
Sbjct: 8 LYECSELVHLRLRSDGTQRSLMEDA---AAVPEPGALSVGSRERSSLQLVQLTEAELKEQ 64
Query: 62 FVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVAQWDVQVNGE 121
FVRG GPGGQA KT+NCVVL H+P+GIV+KCHQ+RS+ +NRK ARE+L + D+ GE
Sbjct: 65 FVRGDGPGGQATNKTSNCVVLKHVPSGIVVKCHQTRSVEKNRKIAREILQEKVDLFYKGE 124
Query: 122 DS 123
+S
Sbjct: 125 ES 126
>gi|197927090|ref|NP_001128189.1| probable peptide chain release factor C12orf65 homolog,
mitochondrial isoform a [Mus musculus]
gi|81895172|sp|Q80VP5.1|CL065_MOUSE RecName: Full=Probable peptide chain release factor C12orf65
homolog, mitochondrial; Flags: Precursor
gi|28422444|gb|AAH46909.1| RIKEN cDNA 2810006K23 gene [Mus musculus]
gi|148687649|gb|EDL19596.1| RIKEN cDNA 2810006K23, isoform CRA_b [Mus musculus]
Length = 184
Score = 99.8 bits (247), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 42/77 (54%), Positives = 61/77 (79%)
Query: 47 YSTIPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTA 106
Y + ++E +++E+FV+G GPGGQA KT+NCVVL H+P+GIV+KCHQ+RS+ +NRK A
Sbjct: 52 YPALLPLNESELEEQFVKGHGPGGQATNKTSNCVVLKHVPSGIVVKCHQTRSVDQNRKIA 111
Query: 107 RELLVAQWDVQVNGEDS 123
R++L + DV NGE+S
Sbjct: 112 RKVLQEKVDVFYNGENS 128
>gi|74180243|dbj|BAE24439.1| unnamed protein product [Mus musculus]
Length = 152
Score = 99.4 bits (246), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 42/77 (54%), Positives = 61/77 (79%)
Query: 47 YSTIPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTA 106
Y + ++E +++E+FV+G GPGGQA KT+NCVVL H+P+GIV+KCHQ+RS+ +NRK A
Sbjct: 52 YPALLPLNESELEEQFVKGHGPGGQATNKTSNCVVLKHVPSGIVVKCHQTRSVDQNRKIA 111
Query: 107 RELLVAQWDVQVNGEDS 123
R++L + DV NGE+S
Sbjct: 112 RKVLQEKVDVFYNGENS 128
>gi|432873961|ref|XP_004072403.1| PREDICTED: probable peptide chain release factor C12orf65 homolog,
mitochondrial-like [Oryzias latipes]
Length = 168
Score = 99.4 bits (246), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 45/74 (60%), Positives = 57/74 (77%)
Query: 50 IPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTAREL 109
P + E +++E+FVRGSGPGGQA KT+NCVVL HIPTGIV+KCHQ+RS+ NRK ARE+
Sbjct: 49 FPVLVEDELEEQFVRGSGPGGQATNKTSNCVVLKHIPTGIVVKCHQTRSVDINRKRAREI 108
Query: 110 LVAQWDVQVNGEDS 123
+ + DV GE S
Sbjct: 109 MREKLDVAYKGELS 122
>gi|327276060|ref|XP_003222789.1| PREDICTED: probable peptide chain release factor C12orf65,
mitochondrial-like [Anolis carolinensis]
Length = 197
Score = 99.0 bits (245), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 43/71 (60%), Positives = 57/71 (80%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
++E D++E+FVRGSGPGGQA KT+NCVVL H+P+GIV+KCHQ+RS+ +NRK AR +L
Sbjct: 88 LNEADLEEQFVRGSGPGGQATNKTSNCVVLKHLPSGIVVKCHQTRSVEQNRKKARTILQE 147
Query: 113 QWDVQVNGEDS 123
+ DV GE S
Sbjct: 148 KVDVFYKGESS 158
>gi|225717004|gb|ACO14348.1| C12orf65 homolog [Esox lucius]
Length = 167
Score = 98.6 bits (244), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 56/121 (46%), Positives = 77/121 (63%), Gaps = 8/121 (6%)
Query: 47 YSTIPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTA 106
Y +P ++E ++ E+FVRGSGPGGQA KT+NCVVL H PTGIV+KCHQ+RS+ NRK A
Sbjct: 46 YIDLPALNEDELDEQFVRGSGPGGQATNKTSNCVVLRHNPTGIVVKCHQTRSVETNRKRA 105
Query: 107 RELLVAQWDVQVNGEDS-----LNAQIRRIDEKRRATQEQ--KKRKL-DALKKAWKERED 158
R+++ + +V GE+S I+R +KR+ E KKR +AL K +D
Sbjct: 106 RQIMREKLEVIYKGEESDILKNKKESIQRKQDKRKKANENLVKKRLFKEALMADSKSVDD 165
Query: 159 R 159
R
Sbjct: 166 R 166
>gi|417396497|gb|JAA45282.1| Putative mitochondrial polypeptide chain release factor [Desmodus
rotundus]
Length = 171
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 41/78 (52%), Positives = 63/78 (80%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
+DE +++E+FV+G GPGGQA KT+NCVVL H+P+G+V+KCHQ+RS+ +NRK AR+++
Sbjct: 52 LDEGELEEQFVKGHGPGGQATNKTSNCVVLKHVPSGLVVKCHQTRSVDQNRKIARKIMQE 111
Query: 113 QWDVQVNGEDSLNAQIRR 130
+ D+ NGE+SL + +R
Sbjct: 112 KVDIFYNGENSLAHREKR 129
>gi|355390285|ref|NP_001239017.1| probable peptide chain release factor C12orf65, mitochondrial
[Gallus gallus]
Length = 164
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 42/72 (58%), Positives = 58/72 (80%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
++ E +++E+FVRG GPGGQA KT+NCVVL H+P+GIV+KCHQ+RS+ +NRK ARE+L
Sbjct: 52 ELTEAELKEQFVRGDGPGGQATNKTSNCVVLKHVPSGIVVKCHQTRSVEKNRKIAREILQ 111
Query: 112 AQWDVQVNGEDS 123
+ D+ GEDS
Sbjct: 112 EKVDLFYKGEDS 123
>gi|345323062|ref|XP_001507092.2| PREDICTED: probable peptide chain release factor C12orf65,
mitochondrial-like [Ornithorhynchus anatinus]
Length = 173
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/110 (46%), Positives = 77/110 (70%), Gaps = 7/110 (6%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
++E +++E+FV+G GPGGQA KT+NCVVL HIP+GIV+KCHQ+RS+ +NRK ARE+L
Sbjct: 55 LNESELEEQFVKGHGPGGQATNKTSNCVVLKHIPSGIVVKCHQTRSVDQNRKKAREILQE 114
Query: 113 QWDVQVNGEDSLNAQIRRIDEKRRATQE-------QKKRKLDALKKAWKE 155
+ D+ GE+S + +R EK + ++ +KK+ L L+KA +E
Sbjct: 115 KVDIFYKGENSYIFKAKREAEKNKREKKRKAKEILEKKKHLKELQKACQE 164
>gi|225715830|gb|ACO13761.1| C12orf65 homolog [Esox lucius]
Length = 167
Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 43/77 (55%), Positives = 59/77 (76%)
Query: 47 YSTIPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTA 106
Y +P ++E ++ E+FVRGSGPGGQA KT+NCVVL H PTGIV+KCHQ+RS+ NRK A
Sbjct: 46 YIDLPALNEDELDEQFVRGSGPGGQATNKTSNCVVLRHNPTGIVVKCHQTRSVETNRKRA 105
Query: 107 RELLVAQWDVQVNGEDS 123
R+++ + +V GE+S
Sbjct: 106 RQIMREKLEVIYKGEES 122
>gi|156343066|ref|XP_001621028.1| hypothetical protein NEMVEDRAFT_v1g7994 [Nematostella vectensis]
gi|156206594|gb|EDO28928.1| predicted protein [Nematostella vectensis]
Length = 87
Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 50/90 (55%), Positives = 64/90 (71%), Gaps = 4/90 (4%)
Query: 47 YSTIPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTA 106
Y + K+ E+DI+ERFV+G G GGQ V KTNNCV L H+PTGI CHQ+RSL+ NR A
Sbjct: 1 YYHVVKLQEEDIEERFVKGWGKGGQKVNKTNNCVELRHVPTGI---CHQTRSLTRNRSIA 57
Query: 107 RELLVAQWDVQVNGEDSLNA-QIRRIDEKR 135
RELL+ Q D NG+DS A QI +I +++
Sbjct: 58 RELLLNQLDQLYNGKDSKAAIQIAKIKKRK 87
>gi|400260483|pdb|2RSM|A Chain A, Solution Structure And Sirna-Mediated Knockdown Analysis
Of The Mitochondrial Disease-Related Protein C12orf65
(Ict2)
Length = 115
Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 40/77 (51%), Positives = 58/77 (75%)
Query: 47 YSTIPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTA 106
Y + ++E +++E+FV+G GPGGQA KT+NCVVL H+P+GIV+KCHQ+RS+ +NRK A
Sbjct: 37 YPALLPLNESELEEQFVKGHGPGGQATNKTSNCVVLKHVPSGIVVKCHQTRSVDQNRKIA 96
Query: 107 RELLVAQWDVQVNGEDS 123
R++L + DV N S
Sbjct: 97 RKVLQEKVDVFYNSGPS 113
>gi|56753039|gb|AAW24729.1| SJCHGC03759 protein [Schistosoma japonicum]
Length = 163
Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 49/105 (46%), Positives = 66/105 (62%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
+E D+ E FVRG GPGGQ++ T NCVVL H PTGI++KC SR L +NR+ AR L
Sbjct: 40 FNECDLSEMFVRGWGPGGQSINTTANCVVLKHEPTGIMVKCQDSRELEKNRELARRRLND 99
Query: 113 QWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKLDALKKAWKERE 157
+ DV NGE+S QI R + + + +K A K+A+K+RE
Sbjct: 100 KLDVHFNGENSRIQQIHRQQKLKENQSYLRSKKRLAAKQAFKKRE 144
>gi|194214381|ref|XP_001492966.2| PREDICTED: probable peptide chain release factor C12orf65,
mitochondrial-like [Equus caballus]
Length = 166
Score = 92.4 bits (228), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 43/75 (57%), Positives = 62/75 (82%)
Query: 50 IPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTAREL 109
+P ++E +++E+FV+G GPGGQA KT+NCVVL H+P+GIV+KCHQ+RS+ +NRK AR++
Sbjct: 52 LPSLEESELEEQFVKGHGPGGQATNKTSNCVVLKHMPSGIVVKCHQTRSVDQNRKLARKI 111
Query: 110 LVAQWDVQVNGEDSL 124
L + DV NGE+SL
Sbjct: 112 LQEKVDVFYNGENSL 126
>gi|260785096|ref|XP_002587599.1| hypothetical protein BRAFLDRAFT_95745 [Branchiostoma floridae]
gi|229272748|gb|EEN43610.1| hypothetical protein BRAFLDRAFT_95745 [Branchiostoma floridae]
Length = 177
Score = 91.7 bits (226), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 47/101 (46%), Positives = 69/101 (68%), Gaps = 4/101 (3%)
Query: 62 FVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVAQWDVQVNGE 121
F RG GPGGQA KTNNCV+L H+PTGIV+KCHQ+RSL ENRK AR+ + + D+ + G+
Sbjct: 75 FQRGWGPGGQATNKTNNCVLLKHVPTGIVVKCHQTRSLDENRKIARQHMREKLDLHLKGQ 134
Query: 122 DS-LNAQIRRIDEKRRATQEQKKRKLD---ALKKAWKERED 158
+S L + R + K+R +++ + L+ A K+ +E +D
Sbjct: 135 ESELVKEKRELAIKKREKRKKANKNLEKKRAFKQLLQESDD 175
>gi|367038745|ref|XP_003649753.1| hypothetical protein THITE_2125932 [Thielavia terrestris NRRL 8126]
gi|346997014|gb|AEO63417.1| hypothetical protein THITE_2125932 [Thielavia terrestris NRRL 8126]
Length = 223
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 62/91 (68%)
Query: 55 EKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVAQW 114
E +I+E F++GSGPGGQ + KTN+ V L HIPTGIV+K +RS S+NR AR+LL A+
Sbjct: 23 ESEIEETFIKGSGPGGQKINKTNSAVQLRHIPTGIVVKSQATRSRSQNRAIARQLLAARL 82
Query: 115 DVQVNGEDSLNAQIRRIDEKRRATQEQKKRK 145
D VNG S A + + KR A++ +K R+
Sbjct: 83 DELVNGAQSRTAIVSEVKRKRAASRAKKSRR 113
>gi|348554383|ref|XP_003463005.1| PREDICTED: probable peptide chain release factor C12orf65,
mitochondrial-like [Cavia porcellus]
Length = 182
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 39/63 (61%), Positives = 52/63 (82%)
Query: 61 RFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVAQWDVQVNG 120
+FV+G GPGGQA KTNNCVVL H+P+G+V+KCHQ+RS+ +NRK AR++L + DV NG
Sbjct: 63 QFVKGHGPGGQATNKTNNCVVLKHVPSGLVVKCHQTRSVDQNRKLARKILQEKVDVFYNG 122
Query: 121 EDS 123
E+S
Sbjct: 123 ENS 125
>gi|212526542|ref|XP_002143428.1| peptidyl-tRNA hydrolase domain protein [Talaromyces marneffei ATCC
18224]
gi|210072826|gb|EEA26913.1| peptidyl-tRNA hydrolase domain protein [Talaromyces marneffei ATCC
18224]
Length = 177
Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/103 (46%), Positives = 71/103 (68%), Gaps = 1/103 (0%)
Query: 51 PKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELL 110
PK+D+KDI +++G+GPGGQ + KTN+ V L H PTGIV+K +RS S+N+K A+E+L
Sbjct: 39 PKLDDKDITGSYLKGTGPGGQKINKTNSAVQLIHKPTGIVVKSQATRSRSQNQKIAKEIL 98
Query: 111 VAQWDVQVNGEDSLNAQIRRIDEKRRATQEQKK-RKLDALKKA 152
A+ +V GE S A + +KR+A+ +KK RK AL++A
Sbjct: 99 AAKVEVLEKGEQSREAIKNALKKKRKASSMKKKRRKYRALEEA 141
>gi|58257471|gb|AAW69357.1| peptide chain release factor-like protein [Magnaporthe grisea]
gi|440470023|gb|ELQ39112.1| peptidyl-tRNA hydrolase domain-containing protein [Magnaporthe
oryzae Y34]
gi|440489487|gb|ELQ69136.1| peptidyl-tRNA hydrolase domain-containing protein [Magnaporthe
oryzae P131]
Length = 195
Score = 89.7 bits (221), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/100 (48%), Positives = 67/100 (67%), Gaps = 4/100 (4%)
Query: 55 EKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVAQW 114
E +I+E F++GSGPGGQ + KTN+ V L HIPTGIV+KC ++RS +NRK AR+LL +
Sbjct: 67 ETEIEESFLKGSGPGGQKINKTNSAVQLKHIPTGIVVKCQETRSRDQNRKIARQLLATRL 126
Query: 115 DVQVNGEDSLNAQIRRIDEKRRATQEQKK----RKLDALK 150
D NG+ S +A + K+RA+ +K RKL+A K
Sbjct: 127 DDLNNGDQSRSAIVGAHKVKKRASAAKKSARKYRKLEAEK 166
>gi|389644480|ref|XP_003719872.1| peptidyl-tRNA hydrolase domain-containing protein [Magnaporthe
oryzae 70-15]
gi|351639641|gb|EHA47505.1| peptidyl-tRNA hydrolase domain-containing protein [Magnaporthe
oryzae 70-15]
Length = 201
Score = 89.7 bits (221), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 48/100 (48%), Positives = 67/100 (67%), Gaps = 4/100 (4%)
Query: 55 EKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVAQW 114
E +I+E F++GSGPGGQ + KTN+ V L HIPTGIV+KC ++RS +NRK AR+LL +
Sbjct: 73 ETEIEESFLKGSGPGGQKINKTNSAVQLKHIPTGIVVKCQETRSRDQNRKIARQLLATRL 132
Query: 115 DVQVNGEDSLNAQIRRIDEKRRATQEQKK----RKLDALK 150
D NG+ S +A + K+RA+ +K RKL+A K
Sbjct: 133 DDLNNGDQSRSAIVGAHKVKKRASAAKKSARKYRKLEAEK 172
>gi|196010673|ref|XP_002115201.1| hypothetical protein TRIADDRAFT_28629 [Trichoplax adhaerens]
gi|190582584|gb|EDV22657.1| hypothetical protein TRIADDRAFT_28629 [Trichoplax adhaerens]
Length = 125
Score = 89.7 bits (221), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 49/105 (46%), Positives = 68/105 (64%), Gaps = 1/105 (0%)
Query: 47 YSTIPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTA 106
Y +I KDI+E FV+GSGPGGQ V K++NCV+L H PTGIVIKCHQSRS NR A
Sbjct: 15 YYAQSQIPTKDIEESFVKGSGPGGQKVNKSSNCVILKHKPTGIVIKCHQSRSQYHNRIIA 74
Query: 107 RELLVAQWDVQVNGEDSLNAQIRRIDEKRRATQE-QKKRKLDALK 150
R+LL + + N ++ + ++++ T + + KRKL+ LK
Sbjct: 75 RQLLKDKIEASQNCSNNSQEKKFLKQKRKKMTSKIRSKRKLEILK 119
>gi|444724902|gb|ELW65488.1| hypothetical protein TREES_T100008977 [Tupaia chinensis]
Length = 214
Score = 89.4 bits (220), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 40/63 (63%), Positives = 52/63 (82%)
Query: 61 RFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVAQWDVQVNG 120
+FV+G GPGGQA KT+NCVVL HIP+GIV+KCHQ+RS+ +NRK AR++L + DV NG
Sbjct: 111 QFVKGHGPGGQATNKTSNCVVLKHIPSGIVVKCHQTRSVDQNRKLARKILQEKVDVFYNG 170
Query: 121 EDS 123
E+S
Sbjct: 171 ENS 173
>gi|242781170|ref|XP_002479747.1| peptidyl-tRNA hydrolase domain protein [Talaromyces stipitatus ATCC
10500]
gi|218719894|gb|EED19313.1| peptidyl-tRNA hydrolase domain protein [Talaromyces stipitatus ATCC
10500]
Length = 174
Score = 89.0 bits (219), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 48/103 (46%), Positives = 69/103 (66%), Gaps = 1/103 (0%)
Query: 51 PKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELL 110
PK+D+KDI +++G+GPGGQ + KTN+ V L H PTGIV+K +RS S+N+K ARE+L
Sbjct: 41 PKLDDKDITGSYLKGTGPGGQKINKTNSAVQLIHKPTGIVVKSQATRSRSQNQKIAREIL 100
Query: 111 VAQWDVQVNGEDSLNAQIRRIDEKRRATQEQKK-RKLDALKKA 152
A+ + GE S A + KR+A+ +KK RK AL++A
Sbjct: 101 AAKVEELEKGEQSREAIKNALKRKRKASSMKKKRRKYRALEEA 143
>gi|340522855|gb|EGR53088.1| hypothetical protein TRIREDRAFT_124322 [Trichoderma reesei QM6a]
Length = 220
Score = 88.6 bits (218), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 44/116 (37%), Positives = 70/116 (60%), Gaps = 11/116 (9%)
Query: 41 VSNIDIYSTIPKID-----------EKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 89
+ + +ST+P + + +I+E +++GSGPGGQ + KTN+ V L HIPTGI
Sbjct: 24 IPKLSFFSTLPPLQKNLPPRPKPPPDSEIEESYLKGSGPGGQKINKTNSAVQLKHIPTGI 83
Query: 90 VIKCHQSRSLSENRKTARELLVAQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRK 145
V+K +RS S+NRK ARE+L + D NG+ S +A + + +KR + +K R+
Sbjct: 84 VVKSQATRSRSQNRKLAREILAQRIDELTNGDHSRSAIVGAVKKKRADSAAKKSRR 139
>gi|336257871|ref|XP_003343757.1| hypothetical protein SMAC_04415 [Sordaria macrospora k-hell]
gi|380091615|emb|CCC10747.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 250
Score = 88.6 bits (218), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 39/73 (53%), Positives = 56/73 (76%)
Query: 51 PKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELL 110
PK+ E +++E +++GSGPGGQ + KTN+ V L HIPT IVIKC ++RS ++NRK ARE+L
Sbjct: 81 PKLPEDELEEVYLKGSGPGGQKINKTNSAVQLRHIPTNIVIKCQETRSRTQNRKLAREIL 140
Query: 111 VAQWDVQVNGEDS 123
A+ D +NG+ S
Sbjct: 141 AAKVDFHLNGDKS 153
>gi|85101373|ref|XP_961134.1| hypothetical protein NCU04174 [Neurospora crassa OR74A]
gi|16944642|emb|CAD11402.1| conserved hypothetical protein [Neurospora crassa]
gi|28922674|gb|EAA31898.1| predicted protein [Neurospora crassa OR74A]
Length = 172
Score = 88.6 bits (218), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 39/73 (53%), Positives = 57/73 (78%)
Query: 51 PKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELL 110
PK+ E +++E +++GSGPGGQ + KTN+ V L HIPT IVIKC ++RS ++NRK ARE+L
Sbjct: 5 PKLPEDELEEVYLKGSGPGGQKINKTNSAVQLRHIPTNIVIKCQETRSRTQNRKLAREIL 64
Query: 111 VAQWDVQVNGEDS 123
A+ D+ +NG+ S
Sbjct: 65 AAKVDLFLNGDKS 77
>gi|336472220|gb|EGO60380.1| hypothetical protein NEUTE1DRAFT_97551 [Neurospora tetrasperma FGSC
2508]
gi|350294560|gb|EGZ75645.1| hypothetical protein NEUTE2DRAFT_126599 [Neurospora tetrasperma
FGSC 2509]
Length = 168
Score = 88.2 bits (217), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 39/73 (53%), Positives = 57/73 (78%)
Query: 51 PKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELL 110
PK+ E +++E +++GSGPGGQ + KTN+ V L HIPT IVIKC ++RS ++NRK ARE+L
Sbjct: 5 PKLPEDELEEVYLKGSGPGGQKINKTNSAVQLRHIPTNIVIKCQETRSRTQNRKLAREIL 64
Query: 111 VAQWDVQVNGEDS 123
A+ D+ +NG+ S
Sbjct: 65 AAKVDLFLNGDKS 77
>gi|393245369|gb|EJD52879.1| hypothetical protein AURDEDRAFT_157434 [Auricularia delicata
TFB-10046 SS5]
Length = 328
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/103 (41%), Positives = 63/103 (61%), Gaps = 2/103 (1%)
Query: 19 RLLESQVTITRELRNDGYHRNL--VSNIDIYSTIPKIDEKDIQERFVRGSGPGGQAVAKT 76
+L ES++ + NL + + +P ++E D+ E FVRGSGPGGQ++ KT
Sbjct: 152 KLTESELALLSNTDASAAQVNLSMLKKLAAARAVPTLNEDDLDEAFVRGSGPGGQSINKT 211
Query: 77 NNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVAQWDVQVN 119
NCV LTH PTG+ + C +RSL++NR+ AR L+ + D QVN
Sbjct: 212 RNCVQLTHRPTGLRVDCQMTRSLADNRRIARIWLLRKLDEQVN 254
>gi|393907104|gb|EFO19652.2| hypothetical protein LOAG_08838 [Loa loa]
Length = 152
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/107 (42%), Positives = 67/107 (62%)
Query: 49 TIPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARE 108
T P I +D ++ + G GPGGQ V T N V + H+PTGIV++ HQSR L EN + A+E
Sbjct: 27 TFPVIRSEDCVQKIISGWGPGGQKVNMTRNAVTIKHVPTGIVVRVHQSRLLQENIEIAQE 86
Query: 109 LLVAQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKLDALKKAWKE 155
L D +NGE+S +AQ+ R++ +R A ++KK + LKK + +
Sbjct: 87 RLKHAVDRYLNGENSYDAQLERMERERGAMNKRKKAVIRDLKKMYSQ 133
>gi|452825605|gb|EME32601.1| bacterial peptide chain release factor-like protein [Galdieria
sulphuraria]
Length = 223
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/109 (44%), Positives = 73/109 (66%), Gaps = 7/109 (6%)
Query: 55 EKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVAQW 114
E+D+ E+F+RG GPGGQ++ KT +CVVL H PTGI +KC +SRS NR+ AR+ L +
Sbjct: 101 EQDLDEKFIRGGGPGGQSINKTESCVVLVHKPTGIWVKCQESRSQFRNRQIARQRLKEKI 160
Query: 115 DVQVNGEDSLNAQ-IRRIDEKRRATQEQKKRKLDALKKAWKEREDRRNT 162
D+ GE+S AQ I +I RA + +++K A+KK +K +++R +
Sbjct: 161 DLYYRGEESKVAQKIAKI----RARKANRRKK--AIKKHYKSKKEREQS 203
>gi|449019728|dbj|BAM83130.1| similar to bacterial peptide chain release factor [Cyanidioschyzon
merolae strain 10D]
Length = 205
Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/108 (44%), Positives = 70/108 (64%), Gaps = 5/108 (4%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
+++E D++E FV+G GPGGQ V KT++CV+L H PTGIVI+C RS +NR+ AR LL
Sbjct: 98 ELNEADLEETFVKGGGPGGQKVNKTSSCVILRHTPTGIVIRCQAFRSQFQNRQEARRLLA 157
Query: 112 AQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKLDALKKAWKEREDR 159
+ D+Q+ GE S +Q E R ++KR+ +KK +K R D+
Sbjct: 158 RKLDLQLRGEASQVSQ-----EIARIRARKRKRQQRVMKKYFKSRSDQ 200
>gi|339237345|ref|XP_003380227.1| nicotinamide phosphoribosyltransferase [Trichinella spiralis]
gi|316976972|gb|EFV60157.1| nicotinamide phosphoribosyltransferase [Trichinella spiralis]
Length = 544
Score = 87.8 bits (216), Expect = 1e-15, Method: Composition-based stats.
Identities = 44/109 (40%), Positives = 66/109 (60%)
Query: 51 PKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELL 110
P ++E D++E+FV G GPGGQ V K NCV L H+PTG+ +K H+ R L NR AR L
Sbjct: 412 PPLEEPDLEEKFVSGHGPGGQNVNKRQNCVFLRHVPTGLSVKVHEDRLLQRNRIIARVRL 471
Query: 111 VAQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKLDALKKAWKEREDR 159
+ D +NGE+S A + +++ + K+RK +K+ KER+ +
Sbjct: 472 QEKLDQLLNGENSFLALKAKELKQKSLKAQWKRRKGREMKRLAKERQQQ 520
>gi|256085783|ref|XP_002579092.1| hypothetical protein [Schistosoma mansoni]
gi|360043221|emb|CCD78633.1| hypothetical protein Smp_079810 [Schistosoma mansoni]
Length = 155
Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/77 (55%), Positives = 52/77 (67%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
+E D+ E V GSGPGGQ++ KT NCVVL HIPTGIV+KC SR L NR AR+ L
Sbjct: 30 FNECDLSEMAVLGSGPGGQSINKTANCVVLKHIPTGIVVKCQDSRELERNRILARQRLND 89
Query: 113 QWDVQVNGEDSLNAQIR 129
+ DV NGE+S Q+R
Sbjct: 90 KLDVHFNGENSRIEQLR 106
>gi|340914850|gb|EGS18191.1| putative translation release factor [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 231
Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 40/77 (51%), Positives = 53/77 (68%)
Query: 55 EKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVAQW 114
E +I+E F++GSGPGGQ + KTN+ V L H PTGIV+KC +RS +NRK ARELL +
Sbjct: 86 ESEIEESFLKGSGPGGQKINKTNSAVQLRHTPTGIVVKCQATRSREQNRKIARELLAQKL 145
Query: 115 DVQVNGEDSLNAQIRRI 131
D +NG+ S A + I
Sbjct: 146 DELINGDKSRTAIVSEI 162
>gi|242223756|ref|XP_002477455.1| predicted protein [Postia placenta Mad-698-R]
gi|220722947|gb|EED77345.1| predicted protein [Postia placenta Mad-698-R]
Length = 275
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 36/70 (51%), Positives = 52/70 (74%)
Query: 50 IPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTAREL 109
+P++ E+D++E FVRGSGPGGQ++ KT N V L H PTG+ + C ++RSLS+NRK AR +
Sbjct: 164 VPELKEEDLEEAFVRGSGPGGQSINKTENNVQLLHKPTGLRVSCQETRSLSQNRKLARRI 223
Query: 110 LVAQWDVQVN 119
L+ + D N
Sbjct: 224 LLGKLDALYN 233
>gi|389749198|gb|EIM90375.1| hypothetical protein STEHIDRAFT_154200 [Stereum hirsutum FP-91666
SS1]
Length = 270
Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 39/70 (55%), Positives = 50/70 (71%)
Query: 50 IPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTAREL 109
IP++ E D++E FVRGSGPGGQ+V KT N V L H PTGI + CH++RSL +NR AR+
Sbjct: 162 IPELKESDLEENFVRGSGPGGQSVNKTENNVQLLHKPTGIRVTCHETRSLEQNRTIARKK 221
Query: 110 LVAQWDVQVN 119
L+ Q D N
Sbjct: 222 LLNQLDQLAN 231
>gi|242214518|ref|XP_002473081.1| predicted protein [Postia placenta Mad-698-R]
gi|220727819|gb|EED81727.1| predicted protein [Postia placenta Mad-698-R]
Length = 268
Score = 85.9 bits (211), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 36/70 (51%), Positives = 52/70 (74%)
Query: 50 IPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTAREL 109
+P++ E+D++E FVRGSGPGGQ++ KT N V L H PTG+ + C ++RSLS+NRK AR +
Sbjct: 159 VPELKEEDLEEAFVRGSGPGGQSINKTENNVQLLHKPTGLRVSCQETRSLSQNRKLARRI 218
Query: 110 LVAQWDVQVN 119
L+ + D N
Sbjct: 219 LLGKLDALYN 228
>gi|395330192|gb|EJF62576.1| hypothetical protein DICSQDRAFT_57884 [Dichomitus squalens LYAD-421
SS1]
Length = 280
Score = 85.5 bits (210), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 37/70 (52%), Positives = 52/70 (74%)
Query: 50 IPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTAREL 109
+P++ E+D++E FVRGSGPGGQ+V KT N V L H PTGI + C ++RSL +NRK AR++
Sbjct: 164 LPELKEEDLEESFVRGSGPGGQSVNKTENNVQLLHKPTGIRVTCQETRSLMQNRKLARKI 223
Query: 110 LVAQWDVQVN 119
L+ + D N
Sbjct: 224 LLDKLDALFN 233
>gi|392567655|gb|EIW60830.1| hypothetical protein TRAVEDRAFT_36415 [Trametes versicolor
FP-101664 SS1]
Length = 277
Score = 85.5 bits (210), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 36/70 (51%), Positives = 51/70 (72%)
Query: 50 IPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTAREL 109
+P++ E D++E FVRGSGPGGQ+V KT N V L H PTG+ + C ++RSL +NRK AR++
Sbjct: 161 VPELKEADLEESFVRGSGPGGQSVNKTENNVQLLHKPTGLRVACQETRSLQQNRKIARKI 220
Query: 110 LVAQWDVQVN 119
L+ + D N
Sbjct: 221 LLGKLDALYN 230
>gi|145550427|ref|XP_001460892.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124428723|emb|CAK93495.1| unnamed protein product [Paramecium tetraurelia]
Length = 723
Score = 85.5 bits (210), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 51/72 (70%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
I + D++ +F++G GPGGQA+ KT+NCV LTH PTGI IKC +SR L N+ A + L
Sbjct: 613 IHQTDLEWKFIKGGGPGGQAINKTSNCVQLTHTPTGIQIKCQKSRDLETNKNYAIKALKE 672
Query: 113 QWDVQVNGEDSL 124
+ D Q+NG +SL
Sbjct: 673 KLDEQINGTNSL 684
>gi|324521421|gb|ADY47851.1| Peptide chain release factor [Ascaris suum]
Length = 141
Score = 85.1 bits (209), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 45/109 (41%), Positives = 69/109 (63%), Gaps = 5/109 (4%)
Query: 49 TIPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARE 108
P+I +D +++F+ GSGPGGQ V N V+L HIPTGIV+K H+SR L +N + A E
Sbjct: 33 VFPEIRREDCEQKFISGSGPGGQKVNTAQNAVMLKHIPTGIVVKVHESRLLPKNIEIAYE 92
Query: 109 LLVAQW--DVQVNGEDSLNAQIRRIDEKRRATQEQKKRKLDALKKAWKE 155
L ++ D VN E Q+++++ RA +E+ KRK +AL++ +E
Sbjct: 93 RLRLKYALDRHVNKEKCYEEQLKKLE---RAKEEKLKRKREALRQMKRE 138
>gi|449543486|gb|EMD34462.1| hypothetical protein CERSUDRAFT_117318, partial [Ceriporiopsis
subvermispora B]
Length = 224
Score = 85.1 bits (209), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 38/70 (54%), Positives = 52/70 (74%)
Query: 50 IPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTAREL 109
IP++ E+DI+E FVRGSGPGGQ++ KT N V L H P+G+ + C ++RSLS+NRK AR L
Sbjct: 110 IPELREEDIEETFVRGSGPGGQSINKTENNVQLLHKPSGLRVSCQETRSLSQNRKLARRL 169
Query: 110 LVAQWDVQVN 119
L+ + D N
Sbjct: 170 LLQKLDTLQN 179
>gi|169854029|ref|XP_001833692.1| hypothetical protein CC1G_03909 [Coprinopsis cinerea okayama7#130]
gi|116505342|gb|EAU88237.1| hypothetical protein CC1G_03909 [Coprinopsis cinerea okayama7#130]
Length = 264
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 37/70 (52%), Positives = 52/70 (74%)
Query: 50 IPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTAREL 109
+P++ E+D++E FVRGSGPGGQ++ KT N V L H PTGI + C ++RSLS+NRK AR+
Sbjct: 155 VPELKEEDLEESFVRGSGPGGQSINKTENNVQLLHKPTGIRVSCQETRSLSQNRKIARKR 214
Query: 110 LVAQWDVQVN 119
L+ + D N
Sbjct: 215 LLEKLDKLAN 224
>gi|448517215|ref|XP_003867740.1| hypothetical protein CORT_0B05940 [Candida orthopsilosis Co 90-125]
gi|380352079|emb|CCG22303.1| hypothetical protein CORT_0B05940 [Candida orthopsilosis]
Length = 180
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/131 (40%), Positives = 73/131 (55%), Gaps = 13/131 (9%)
Query: 38 RNLVSNIDIYSTIPK-----------IDEKDIQERFVRGS-GPGGQAVAKTNNCVVLTHI 85
R L + IPK + E+DIQE F++G GPGGQ + KTN+ V LTH
Sbjct: 7 RRLTTTAPTLYAIPKKNKLPPRPKWLVKEEDIQESFIKGGRGPGGQKINKTNSKVQLTHK 66
Query: 86 PTGIVIKCHQSRSLSENRKTARELLVAQWDVQVNGEDSLNAQIRRIDEKRRATQEQKK-R 144
PTGIV+ C +RS +NRK ARE+L + D N E S NA + +K + ++ +K R
Sbjct: 67 PTGIVVTCQATRSQEQNRKKAREILALKLDDLYNPETSRNALLTERAQKVKQSKAKKSNR 126
Query: 145 KLDALKKAWKE 155
K AL +A +E
Sbjct: 127 KYRALNEAKEE 137
>gi|325185474|emb|CCA19957.1| unnamed protein product putative [Albugo laibachii Nc14]
Length = 152
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/92 (46%), Positives = 63/92 (68%), Gaps = 4/92 (4%)
Query: 55 EKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVAQW 114
E+D+ E+FV+GSG GGQ + K NCV+L H PTGI ++C ++R L +NR+ AR+LL +
Sbjct: 38 EEDLNEQFVKGSGKGGQKINKVRNCVLLKHSPTGIQVRCQKTRCLDDNRRIARKLLTEKL 97
Query: 115 DVQVNGEDSL-NAQIRRIDEK---RRATQEQK 142
D NGE S+ N +I++I ++ RRA QK
Sbjct: 98 DDLYNGEKSVRNQKIQKIQKRKANRRAKATQK 129
>gi|302690942|ref|XP_003035150.1| hypothetical protein SCHCODRAFT_52216 [Schizophyllum commune H4-8]
gi|300108846|gb|EFJ00248.1| hypothetical protein SCHCODRAFT_52216 [Schizophyllum commune H4-8]
Length = 257
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 37/70 (52%), Positives = 53/70 (75%)
Query: 50 IPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTAREL 109
+P++ E+D++E FVRGSGPGGQA+ KT N V L H PTGI + C ++RSL +NRK AR++
Sbjct: 150 VPELREEDLEESFVRGSGPGGQAINKTANNVQLVHKPTGIRVVCQETRSLEQNRKRARKI 209
Query: 110 LVAQWDVQVN 119
++A+ D N
Sbjct: 210 MIAKLDQLYN 219
>gi|347836659|emb|CCD51231.1| hypothetical protein [Botryotinia fuckeliana]
Length = 159
Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/110 (40%), Positives = 72/110 (65%), Gaps = 3/110 (2%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
IDE D E F+ GSGPGGQ + KT++ V L HIPTG+V+K +RS ++NRK AR++L
Sbjct: 8 IDEADFTEVFLHGSGPGGQKINKTSSAVQLKHIPTGMVLKVQATRSRTQNRKIARQMLAE 67
Query: 113 QWDVQVNGEDSLNAQIRRIDEKRRAT---QEQKKRKLDALKKAWKEREDR 159
+ ++ G++S A + +KR+++ + ++K +L A +KA K ED+
Sbjct: 68 RLELLEKGKESRVAIVGETKKKRKSSAVKKSKRKYRLLAEEKAMKAGEDK 117
>gi|403416990|emb|CCM03690.1| predicted protein [Fibroporia radiculosa]
Length = 1597
Score = 84.3 bits (207), Expect = 2e-14, Method: Composition-based stats.
Identities = 37/70 (52%), Positives = 51/70 (72%)
Query: 50 IPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTAREL 109
+P++ E D++E FVRGSGPGGQ++ KT N V L H PTGI + C ++RSLS+NRK AR +
Sbjct: 155 VPQLKEVDLEESFVRGSGPGGQSINKTENNVQLLHKPTGIRVACQETRSLSQNRKLARRV 214
Query: 110 LVAQWDVQVN 119
L+ + D N
Sbjct: 215 LLDKLDAYYN 224
>gi|348678380|gb|EGZ18197.1| hypothetical protein PHYSODRAFT_383672 [Phytophthora sojae]
Length = 96
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 49/66 (74%)
Query: 55 EKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVAQW 114
E D+ E FV+GSG GGQ + K NCV+LTH+PTG+ ++C ++RSL NR+ AR+LL+ +
Sbjct: 3 EADLDESFVKGSGKGGQKINKVRNCVLLTHVPTGLQVRCQKTRSLDGNRRAARKLLLQKL 62
Query: 115 DVQVNG 120
D VNG
Sbjct: 63 DDHVNG 68
>gi|408396484|gb|EKJ75641.1| hypothetical protein FPSE_04142 [Fusarium pseudograminearum CS3096]
Length = 189
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 55/79 (69%)
Query: 55 EKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVAQW 114
E +I+E +V+GSGPGGQ + KTN+ V L H+PTGIV+K +RS +NRK ARELL +
Sbjct: 44 ESEIEESYVKGSGPGGQKINKTNSAVQLKHVPTGIVVKSQATRSRDQNRKHARELLAQRV 103
Query: 115 DVQVNGEDSLNAQIRRIDE 133
D NG+ S +A + R+ E
Sbjct: 104 DELRNGDQSRSAIVGRVKE 122
>gi|171694017|ref|XP_001911933.1| hypothetical protein [Podospora anserina S mat+]
gi|170946957|emb|CAP73761.1| unnamed protein product [Podospora anserina S mat+]
Length = 187
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/91 (45%), Positives = 60/91 (65%)
Query: 55 EKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVAQW 114
E +I+E F++GSGPGGQ + KTN+ V + H+PT IVIKC +RS S+NRK AR++L +
Sbjct: 10 ESEIEESFLKGSGPGGQKINKTNSAVQIKHLPTNIVIKCQATRSRSQNRKIARDILAERL 69
Query: 115 DVQVNGEDSLNAQIRRIDEKRRATQEQKKRK 145
D NG S A + + +KR + +K R+
Sbjct: 70 DELYNGSQSRVAIVGSVKKKRADSAAKKSRR 100
>gi|409046443|gb|EKM55923.1| hypothetical protein PHACADRAFT_93577 [Phanerochaete carnosa
HHB-10118-sp]
Length = 278
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 52/66 (78%)
Query: 50 IPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTAREL 109
IP++ E+DI+E FVRGSGPGGQ++ KT N V L H P+GI + C ++RSL++NRK AR++
Sbjct: 163 IPELKEEDIEETFVRGSGPGGQSINKTENNVQLVHKPSGIRVTCQETRSLTQNRKIARKI 222
Query: 110 LVAQWD 115
L+ + D
Sbjct: 223 LLDKLD 228
>gi|46125917|ref|XP_387512.1| hypothetical protein FG07336.1 [Gibberella zeae PH-1]
Length = 189
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 55/79 (69%)
Query: 55 EKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVAQW 114
E +I+E +V+GSGPGGQ + KTN+ V L H+PTGIV+K +RS +NRK ARELL +
Sbjct: 44 ESEIEESYVKGSGPGGQKINKTNSAVQLKHVPTGIVVKSQATRSRDQNRKHARELLAQRV 103
Query: 115 DVQVNGEDSLNAQIRRIDE 133
D NG+ S +A + R+ E
Sbjct: 104 DELRNGDQSRSAIVGRVKE 122
>gi|449683013|ref|XP_002163246.2| PREDICTED: probable peptide chain release factor C12orf65 homolog,
mitochondrial-like, partial [Hydra magnipapillata]
Length = 132
Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/95 (44%), Positives = 63/95 (66%), Gaps = 3/95 (3%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
+ E D QE+F++GSGPGGQ + KT+NCV L H TGI++KC ++RSL NR ARE L+
Sbjct: 29 LKESDFQEKFIKGSGPGGQKINKTSNCVELKHDATGIIVKCQETRSLERNRVIARERLLE 88
Query: 113 QWDVQVNGEDSLNAQIRRIDEKRRATQE-QKKRKL 146
+ N +S Q +R+D K++ + ++KR+L
Sbjct: 89 KLRFLYNPSES--KQQQRLDAKQKQEKNIERKRRL 121
>gi|406860457|gb|EKD13515.1| peptidyl-tRNA hydrolase domain protein [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 134
Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 71/113 (62%), Gaps = 4/113 (3%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
+DE + E F++GSGPGGQ + KT++ V L H+PTG+V+K +RS ++NRK ARE+L
Sbjct: 8 VDESEFTEVFLKGSGPGGQKINKTSSAVQLKHLPTGLVLKVQATRSRTQNRKIAREMLAE 67
Query: 113 QWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRK----LDALKKAWKEREDRRN 161
+ + G+ S A +R +KR+++ +K R+ LD LK +E + +N
Sbjct: 68 RVEELEKGKQSRVAVVRETKQKRKSSAVKKSRRKYRLLDELKMKGQEAVNEKN 120
>gi|449300516|gb|EMC96528.1| hypothetical protein BAUCODRAFT_47992, partial [Baudoinia
compniacensis UAMH 10762]
Length = 111
Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 40/76 (52%), Positives = 52/76 (68%)
Query: 51 PKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELL 110
PKI E DI E F++GSGPGGQ + KT++ V + HIPTGIV+K ++RS NRK AR+LL
Sbjct: 6 PKIVETDITESFLKGSGPGGQKINKTSSAVQIKHIPTGIVVKSQETRSRELNRKFARQLL 65
Query: 111 VAQWDVQVNGEDSLNA 126
+ D NG+ S A
Sbjct: 66 AEKLDQLENGDQSRTA 81
>gi|409082683|gb|EKM83041.1| hypothetical protein AGABI1DRAFT_111562, partial [Agaricus bisporus
var. burnettii JB137-S8]
Length = 263
Score = 82.4 bits (202), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 50/66 (75%)
Query: 50 IPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTAREL 109
+P++ E+D++E FVRGSGPGGQ+V KT N V L H PTGI + C +RSL +NRK AR++
Sbjct: 160 VPELREEDLEESFVRGSGPGGQSVNKTENNVQLLHKPTGIRVACQDTRSLVQNRKIARKI 219
Query: 110 LVAQWD 115
L+ + D
Sbjct: 220 LLERLD 225
>gi|348678390|gb|EGZ18207.1| hypothetical protein PHYSODRAFT_383105 [Phytophthora sojae]
Length = 103
Score = 82.4 bits (202), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 40/94 (42%), Positives = 59/94 (62%), Gaps = 4/94 (4%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
+ E D+ E FV+GSG GGQ + K NCV+LTH+ TG+ ++C ++RSL NR+ AR+LL+
Sbjct: 1 LREADLDESFVKGSGKGGQKINKVRNCVLLTHVTTGLQVRCQKTRSLDGNRRAARKLLLQ 60
Query: 113 QWDVQVNGEDSLNAQ----IRRIDEKRRATQEQK 142
+ D NG S ++ +RR RRA + K
Sbjct: 61 KLDDHANGALSKRSEKIERLRRKKASRRAKSKHK 94
>gi|390598412|gb|EIN07810.1| hypothetical protein PUNSTDRAFT_88482, partial [Punctularia
strigosozonata HHB-11173 SS5]
Length = 246
Score = 82.4 bits (202), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 37/69 (53%), Positives = 50/69 (72%)
Query: 51 PKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELL 110
P++ E+D++E FVRG GPGGQA+ KTNN V L H PTGI + C Q+RSL NR+ AR++L
Sbjct: 152 PELREEDLEESFVRGHGPGGQAINKTNNNVQLIHKPTGIRVTCQQTRSLDLNRRYARQIL 211
Query: 111 VAQWDVQVN 119
+ + D N
Sbjct: 212 LDKLDQLAN 220
>gi|312084786|ref|XP_003144416.1| hypothetical protein LOAG_08838 [Loa loa]
Length = 140
Score = 82.0 bits (201), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 45/107 (42%), Positives = 64/107 (59%), Gaps = 9/107 (8%)
Query: 49 TIPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARE 108
T PKI + G GPGGQ V T N V + H+PTGIV++ HQSR L EN + A+E
Sbjct: 27 TFPKI---------ISGWGPGGQKVNMTRNAVTIKHVPTGIVVRVHQSRLLQENIEIAQE 77
Query: 109 LLVAQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKLDALKKAWKE 155
L D +NGE+S +AQ+ R++ +R A ++KK + LKK + +
Sbjct: 78 RLKHAVDRYLNGENSYDAQLERMERERGAMNKRKKAVIRDLKKMYSQ 124
>gi|392595661|gb|EIW84984.1| hypothetical protein CONPUDRAFT_87482 [Coniophora puteana
RWD-64-598 SS2]
Length = 263
Score = 82.0 bits (201), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 37/68 (54%), Positives = 48/68 (70%)
Query: 49 TIPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARE 108
T+P++ E+DI+E FVRGSGPGGQ++ KT N V L H PTGI + C ++RSL NR AR
Sbjct: 151 TVPELKEEDIEESFVRGSGPGGQSINKTENNVQLLHKPTGIRVSCQETRSLQTNRMLARR 210
Query: 109 LLVAQWDV 116
L + DV
Sbjct: 211 RLTEKLDV 218
>gi|358389669|gb|EHK27261.1| hypothetical protein TRIVIDRAFT_63025 [Trichoderma virens Gv29-8]
Length = 197
Score = 81.6 bits (200), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 55/77 (71%)
Query: 55 EKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVAQW 114
+ +I+E +++GSGPGGQ + KTN+ V L HIPTGIV+K +RS S+NRK ARE+L +
Sbjct: 47 DSEIEESYLKGSGPGGQKINKTNSAVQLKHIPTGIVVKSQATRSRSQNRKLAREILAQRV 106
Query: 115 DVQVNGEDSLNAQIRRI 131
D +NG+ S +A + I
Sbjct: 107 DEFINGDQSRSAVVGAI 123
>gi|298713472|emb|CBJ27027.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 191
Score = 81.6 bits (200), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 60/92 (65%), Gaps = 1/92 (1%)
Query: 55 EKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVAQW 114
++DI+ERFV+GSGPGGQ + K NCV LTH+P+G+ + C SR L NR AR+ L +
Sbjct: 39 DEDIEERFVKGSGPGGQKINKVRNCVQLTHVPSGVSVSCQDSRELHANRHIARKRLKEKV 98
Query: 115 DVQVNGEDS-LNAQIRRIDEKRRATQEQKKRK 145
+ Q+ G DS + +I +I K+ +Q + + K
Sbjct: 99 EFQLMGADSKVGRRINKIRNKKARSQRKSRLK 130
>gi|322705423|gb|EFY97009.1| peptidyl-tRNA hydrolase domain protein [Metarhizium anisopliae
ARSEF 23]
Length = 182
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/67 (55%), Positives = 50/67 (74%)
Query: 57 DIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVAQWDV 116
+I+E F++GSGPGGQ + KTN+ V L H+PTGIV+K +RS S+NRK ARELL + D
Sbjct: 44 EIEESFLKGSGPGGQKINKTNSAVQLKHVPTGIVVKSQATRSRSQNRKHARELLAQKVDD 103
Query: 117 QVNGEDS 123
++GE S
Sbjct: 104 LLHGEQS 110
>gi|402594635|gb|EJW88561.1| hypothetical protein WUBG_00526 [Wuchereria bancrofti]
Length = 144
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 63/99 (63%)
Query: 57 DIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVAQWDV 116
DI ++ + G GPGGQ V T N V + H+PTG+V++ HQSR L EN + A E L D
Sbjct: 8 DIFQKVISGWGPGGQKVNMTKNAVTIKHVPTGVVVRVHQSRLLQENIEIALERLKHAVDR 67
Query: 117 QVNGEDSLNAQIRRIDEKRRATQEQKKRKLDALKKAWKE 155
+NGE+S +AQ+ R++ +R A ++K+ + +KK + +
Sbjct: 68 HLNGENSYDAQLERMERERGARNKRKRAVIREMKKIYAQ 106
>gi|322697002|gb|EFY88787.1| peptidyl-tRNA hydrolase domain protein [Metarhizium acridum CQMa
102]
Length = 187
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/67 (55%), Positives = 50/67 (74%)
Query: 57 DIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVAQWDV 116
+I+E F++GSGPGGQ + KTN+ V L H+PTGIV+K +RS S+NRK ARELL + D
Sbjct: 44 EIEESFLKGSGPGGQKINKTNSAVQLKHVPTGIVVKSQATRSRSQNRKHARELLAQKVDD 103
Query: 117 QVNGEDS 123
++GE S
Sbjct: 104 LLHGEQS 110
>gi|358401406|gb|EHK50712.1| hypothetical protein TRIATDRAFT_18591, partial [Trichoderma
atroviride IMI 206040]
Length = 140
Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/69 (52%), Positives = 50/69 (72%)
Query: 55 EKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVAQW 114
+ +I+E +++GSGPGGQ + KTN+ V L HIPTGIV+K +RS S+NRK ARE+L +
Sbjct: 13 DSEIEESYLKGSGPGGQKINKTNSAVQLKHIPTGIVVKSQATRSRSQNRKQAREILAQKV 72
Query: 115 DVQVNGEDS 123
D NG+ S
Sbjct: 73 DEFFNGDQS 81
>gi|336367117|gb|EGN95462.1| hypothetical protein SERLA73DRAFT_186477 [Serpula lacrymans var.
lacrymans S7.3]
gi|336379836|gb|EGO20990.1| hypothetical protein SERLADRAFT_475544 [Serpula lacrymans var.
lacrymans S7.9]
Length = 266
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 49/66 (74%)
Query: 50 IPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTAREL 109
IP++ E+DI+E FVRGSGPGGQ++ KT N V + H PTG+ + C ++RSL NRK AR +
Sbjct: 157 IPELREEDIEESFVRGSGPGGQSINKTENNVQIIHKPTGLRVTCQETRSLQTNRKLARRI 216
Query: 110 LVAQWD 115
L+ + D
Sbjct: 217 LLEKLD 222
>gi|170094760|ref|XP_001878601.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164647055|gb|EDR11300.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 294
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 53/79 (67%)
Query: 37 HRNLVSNIDIYSTIPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQS 96
H + + + +IP++ E+D++E FVRGSGPGGQ++ KT N V L H PTG+ + C +
Sbjct: 170 HYSALKKAHLQRSIPELREEDLEETFVRGSGPGGQSINKTENNVQLLHKPTGLRVSCQDT 229
Query: 97 RSLSENRKTARELLVAQWD 115
RSLS NRK AR L+ + D
Sbjct: 230 RSLSLNRKLARRWLLEKLD 248
>gi|406601462|emb|CCH46912.1| Peptide chain release factor 1 [Wickerhamomyces ciferrii]
Length = 397
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/125 (36%), Positives = 70/125 (56%), Gaps = 4/125 (3%)
Query: 35 GYHRNLVSNIDIYSTIPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCH 94
G HR ++ + P IDE + E F++G GPGGQ + KTN+ V L HI GIV+ C
Sbjct: 135 GPHRRIIVRPNRLPPRPTIDESEFTEVFIKGGGPGGQKINKTNSKVQLKHIEYGIVVDCQ 194
Query: 95 QSRSLSENRKTARELLVAQWDV----QVNGEDSLNAQIRRIDEKRRATQEQKKRKLDALK 150
++RS +NRK ARE L + D + N + +L A R+ + R E+ + K++ LK
Sbjct: 195 ETRSREQNRKIAREKLALEVDAIRNPKFNRKIALEAFERKKAKLAREKTERSREKMEKLK 254
Query: 151 KAWKE 155
+ +E
Sbjct: 255 RQKEE 259
>gi|440632293|gb|ELR02212.1| hypothetical protein GMDG_01005 [Geomyces destructans 20631-21]
Length = 168
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/98 (43%), Positives = 64/98 (65%), Gaps = 1/98 (1%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
+ E++ E F+ GSGPGGQ + KT++ V L H+PTGIV+K +RS S+NRK ARELL
Sbjct: 39 LPEEEFTEAFLCGSGPGGQKINKTSSAVQLKHLPTGIVLKVQATRSRSQNRKIARELLAE 98
Query: 113 QWDVQVNGEDSLNAQIRRIDEKRRATQEQK-KRKLDAL 149
+ ++ G +S A + + KR+++ +K KRK AL
Sbjct: 99 RVELLEKGAESRVAIVGNVKAKRKSSATKKSKRKYKAL 136
>gi|327355568|gb|EGE84425.1| peptidyl-tRNA hydrolase domain-containing protein [Ajellomyces
dermatitidis ATCC 18188]
Length = 184
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/100 (42%), Positives = 65/100 (65%), Gaps = 1/100 (1%)
Query: 51 PKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELL 110
PK+D ++ +++G+GPGGQA+ KTN+ V L H PTGIV+K +RS ++N+K A +L
Sbjct: 35 PKLDPSEVTGSYLKGTGPGGQAINKTNSAVQLIHKPTGIVVKSQATRSRTQNQKIAMGIL 94
Query: 111 VAQWDVQVNGEDSLNAQIRRIDEKRRATQEQK-KRKLDAL 149
+ ++Q+ GE S A KR+A++E+K KRK L
Sbjct: 95 AEKVELQLKGEKSRAAIKAETKRKRKASREKKAKRKYRKL 134
>gi|213401645|ref|XP_002171595.1| peptide release factor [Schizosaccharomyces japonicus yFS275]
gi|211999642|gb|EEB05302.1| peptide release factor [Schizosaccharomyces japonicus yFS275]
Length = 144
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/117 (37%), Positives = 63/117 (53%), Gaps = 7/117 (5%)
Query: 13 RNLAGIRLLESQVTITRELRNDGYHRNLVSNIDIYSTIPKIDEKDIQERFVRGSGPGGQA 72
+ L G RL ES I R ++ V I + E D+ E F+RG GPGGQ
Sbjct: 2 KRLFGWRLFESMAFIARR-------QSFVYPAFIQQRFYHLVEADLDETFIRGHGPGGQK 54
Query: 73 VAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVAQWDVQVNGEDSLNAQIR 129
+ KT+ L H P+G++++C ++RS +NRK AR+ L + D+ NGE S AQ R
Sbjct: 55 INKTSIVCQLRHKPSGLIVRCQETRSREQNRKIARKRLAEKLDLLANGEKSRLAQDR 111
>gi|429859250|gb|ELA34038.1| peptidyl-trna hydrolase domain protein [Colletotrichum
gloeosporioides Nara gc5]
Length = 204
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/72 (52%), Positives = 52/72 (72%)
Query: 55 EKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVAQW 114
+ DI+E +++GSGPGGQ + KT++ V L HIPTGIV+K +RS S+NRK ARELL +
Sbjct: 70 DSDIEESYLKGSGPGGQKINKTSSAVQLKHIPTGIVVKSQATRSRSQNRKIARELLAQKL 129
Query: 115 DVQVNGEDSLNA 126
D NG+ S +A
Sbjct: 130 DDLQNGDQSRSA 141
>gi|261196175|ref|XP_002624491.1| conserved hypothetical protein [Ajellomyces dermatitidis SLH14081]
gi|239587624|gb|EEQ70267.1| conserved hypothetical protein [Ajellomyces dermatitidis SLH14081]
Length = 196
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/100 (42%), Positives = 65/100 (65%), Gaps = 1/100 (1%)
Query: 51 PKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELL 110
PK+D ++ +++G+GPGGQA+ KTN+ V L H PTGIV+K +RS ++N+K A +L
Sbjct: 35 PKLDPSEVTGSYLKGTGPGGQAINKTNSAVQLIHKPTGIVVKSQATRSRTQNQKIAMGIL 94
Query: 111 VAQWDVQVNGEDSLNAQIRRIDEKRRATQEQK-KRKLDAL 149
+ ++Q+ GE S A KR+A++E+K KRK L
Sbjct: 95 AEKVELQLKGEKSRAAIKAETKRKRKASREKKAKRKYRKL 134
>gi|321255196|ref|XP_003193341.1| hypothetical protein CGB_D1860W [Cryptococcus gattii WM276]
gi|317459811|gb|ADV21554.1| Hypothetical protein CGB_D1860W [Cryptococcus gattii WM276]
Length = 316
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 48/65 (73%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
+I E +++ERFVRG GPGGQA+ KTN+ V LTHIPTGI ++ +RS ENRK AR +L
Sbjct: 127 EIPEDELEERFVRGRGPGGQAINKTNSSVSLTHIPTGIRVQAQPTRSREENRKVARRILA 186
Query: 112 AQWDV 116
+ +V
Sbjct: 187 ERLEV 191
>gi|239614579|gb|EEQ91566.1| conserved hypothetical protein [Ajellomyces dermatitidis ER-3]
Length = 196
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/100 (42%), Positives = 65/100 (65%), Gaps = 1/100 (1%)
Query: 51 PKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELL 110
PK+D ++ +++G+GPGGQA+ KTN+ V L H PTGIV+K +RS ++N+K A +L
Sbjct: 35 PKLDPSEVTGSYLKGTGPGGQAINKTNSAVQLIHKPTGIVVKSQATRSRTQNQKIAMGIL 94
Query: 111 VAQWDVQVNGEDSLNAQIRRIDEKRRATQEQK-KRKLDAL 149
+ ++Q+ GE S A KR+A++E+K KRK L
Sbjct: 95 AEKVELQLKGEKSRAAIKAETKRKRKASREKKAKRKYRKL 134
>gi|320587327|gb|EFW99807.1| peptidyl-tRNA hydrolase domain containing protein [Grosmannia
clavigera kw1407]
Length = 149
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 59/91 (64%)
Query: 55 EKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVAQW 114
E +I+E FV+G+GPGGQ + KTN+ V L H PTGIV+K +RS S+NR AR++L A+
Sbjct: 52 EDEIEEMFVKGTGPGGQKINKTNSAVQLIHRPTGIVVKSQATRSRSQNRTIARQVLAARL 111
Query: 115 DVQVNGEDSLNAQIRRIDEKRRATQEQKKRK 145
D NG S A + +++A+ +K R+
Sbjct: 112 DELHNGSQSRTAIVADSKRRKKASASKKSRR 142
>gi|346322815|gb|EGX92413.1| peptidyl-tRNA hydrolase domain protein [Cordyceps militaris CM01]
Length = 170
Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 59/89 (66%)
Query: 57 DIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVAQWDV 116
D++E +++GSGPGGQ + KTN+ V L HIPTGIV+K +RS ++NRK AR++L + D
Sbjct: 44 DLEESYLKGSGPGGQKINKTNSAVQLKHIPTGIVVKSQATRSRAQNRKHARDILAQRLDD 103
Query: 117 QVNGEDSLNAQIRRIDEKRRATQEQKKRK 145
NG +S + + +KR + +K R+
Sbjct: 104 LENGPESRAGIVGAVRKKRADSAAKKSRR 132
>gi|258570383|ref|XP_002543995.1| predicted protein [Uncinocarpus reesii 1704]
gi|237904265|gb|EEP78666.1| predicted protein [Uncinocarpus reesii 1704]
Length = 162
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 46/121 (38%), Positives = 71/121 (58%), Gaps = 6/121 (4%)
Query: 43 NIDIYSTIPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSEN 102
N+ P IDE +I +++GSGPGGQ + KT++ V L H+PT V+K +RS S+N
Sbjct: 32 NVKQMPARPTIDESEITGSYLKGSGPGGQKINKTSSAVQLIHLPTNTVVKSQATRSRSQN 91
Query: 103 RKTARELLVAQWDVQVNGEDSLNAQIRRIDEKRRATQEQK-KRKLDALKKAWKEREDRRN 161
RK A ++L + ++ G S A + + +KR+A++ +K KRK AL E E RR
Sbjct: 92 RKIALQILAEKVELLQKGGQSRAAIVAQTKQKRKASKTKKSKRKYRAL-----EEEKRRR 146
Query: 162 T 162
+
Sbjct: 147 S 147
>gi|134115677|ref|XP_773552.1| hypothetical protein CNBI1660 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50256178|gb|EAL18905.1| hypothetical protein CNBI1660 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 315
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 48/65 (73%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
+I E +++ERFV+G GPGGQA+ KTN+ V LTHIPTGI ++ +RS ENRK AR +L
Sbjct: 126 EIPEDELEERFVKGRGPGGQAINKTNSSVSLTHIPTGIRVQAQPTRSREENRKVARRILA 185
Query: 112 AQWDV 116
+ +V
Sbjct: 186 ERLEV 190
>gi|380494985|emb|CCF32737.1| RF-1 domain-containing protein [Colletotrichum higginsianum]
Length = 186
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 52/72 (72%)
Query: 55 EKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVAQW 114
+ DI+E +++GSGPGGQ + KT++ V L HIPTGIV+K +RS ++NRK ARE+L +
Sbjct: 75 DSDIEESYLKGSGPGGQKINKTSSAVQLKHIPTGIVVKSQATRSRTQNRKIAREILAQKI 134
Query: 115 DVQVNGEDSLNA 126
D NGE S +A
Sbjct: 135 DDLQNGEQSRSA 146
>gi|302911185|ref|XP_003050437.1| hypothetical protein NECHADRAFT_84770 [Nectria haematococca mpVI
77-13-4]
gi|256731374|gb|EEU44724.1| hypothetical protein NECHADRAFT_84770 [Nectria haematococca mpVI
77-13-4]
Length = 186
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 54/77 (70%)
Query: 55 EKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVAQW 114
E +I+E +V+GSGPGGQ + KTN+ V L HIPTGIV+K +RS +NRK ARELL +
Sbjct: 45 EFEIEESYVKGSGPGGQKINKTNSAVQLKHIPTGIVVKSQATRSRDQNRKHARELLAQRV 104
Query: 115 DVQVNGEDSLNAQIRRI 131
D NG+ S +A + ++
Sbjct: 105 DEFHNGDQSRSAIVGQV 121
>gi|219111103|ref|XP_002177303.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217411838|gb|EEC51766.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 491
Score = 79.0 bits (193), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 51/74 (68%)
Query: 50 IPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTAREL 109
+P+++E D+ E FVRGSGPGGQ KT+N V L H PT + ++C +RSL +NRK AR+
Sbjct: 385 LPELNEDDLTETFVRGSGPGGQKTNKTSNKVALLHGPTQLRVECQDTRSLQQNRKIARKR 444
Query: 110 LVAQWDVQVNGEDS 123
L A+ D +NG S
Sbjct: 445 LRAKLDEFLNGNQS 458
>gi|384501006|gb|EIE91497.1| hypothetical protein RO3G_16208 [Rhizopus delemar RA 99-880]
Length = 166
Score = 79.0 bits (193), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 49/66 (74%)
Query: 55 EKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVAQW 114
++D+ E FV+GSGPGGQ + K ++CV L HIPTGI ++C QSRSL++NR AR+LL +
Sbjct: 46 DEDLIETFVKGSGPGGQCINKRSSCVDLRHIPTGIRVQCQQSRSLADNRGIARKLLREKL 105
Query: 115 DVQVNG 120
D NG
Sbjct: 106 DELENG 111
>gi|150865855|ref|XP_001385239.2| hypothetical protein PICST_60261 [Scheffersomyces stipitis CBS
6054]
gi|149387111|gb|ABN67210.2| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 156
Score = 78.6 bits (192), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 46/103 (44%), Positives = 63/103 (61%), Gaps = 9/103 (8%)
Query: 53 IDEKDIQERFVRGS-GPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
I E+++ E+F++G GPGGQ + K+N+ V LTH+PTGIV+ C SRS NRK ARE+L
Sbjct: 17 IKEEELDEKFLKGGRGPGGQKINKSNSKVQLTHLPTGIVVTCQYSRSQESNRKRAREILA 76
Query: 112 AQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKR------KLDA 148
+ D N E S NA + D K + Q + K+ KLDA
Sbjct: 77 LKLDDLNNPETSRNAVVN--DRKTKVKQSKSKKANRKYTKLDA 117
>gi|405119599|gb|AFR94371.1| hypothetical protein CNAG_05106 [Cryptococcus neoformans var.
grubii H99]
Length = 315
Score = 78.6 bits (192), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 48/65 (73%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
+I E +++ERFV+G GPGGQA+ KTN+ V LTHIPTGI ++ +RS ENRK AR +L
Sbjct: 126 EIAEDELEERFVKGRGPGGQAINKTNSSVSLTHIPTGIRVQAQPTRSREENRKVARRILA 185
Query: 112 AQWDV 116
+ +V
Sbjct: 186 ERLEV 190
>gi|392869399|gb|EJB11744.1| hypothetical protein CIMG_10212 [Coccidioides immitis RS]
Length = 172
Score = 78.6 bits (192), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 63/100 (63%), Gaps = 1/100 (1%)
Query: 51 PKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELL 110
P IDE +I +++GSGPGGQ + KT++ V L H+PT V+K +RS S+NRK A ++L
Sbjct: 41 PTIDESEITGTYLKGSGPGGQKINKTSSAVQLIHLPTNTVVKSQATRSRSQNRKIALQIL 100
Query: 111 VAQWDVQVNGEDSLNAQIRRIDEKRRATQEQK-KRKLDAL 149
+ ++ G++S A + KR+A+ +K KRK AL
Sbjct: 101 AEKVELLQKGDESRAAIVAETKRKRKASMTKKSKRKYRAL 140
>gi|320037150|gb|EFW19088.1| hypothetical protein CPSG_04634 [Coccidioides posadasii str.
Silveira]
Length = 172
Score = 78.6 bits (192), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 63/100 (63%), Gaps = 1/100 (1%)
Query: 51 PKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELL 110
P IDE +I +++GSGPGGQ + KT++ V L H+PT V+K +RS S+NRK A ++L
Sbjct: 41 PTIDESEITGTYLKGSGPGGQKINKTSSAVQLIHLPTNTVVKSQATRSRSQNRKIALQIL 100
Query: 111 VAQWDVQVNGEDSLNAQIRRIDEKRRATQEQK-KRKLDAL 149
+ ++ G++S A + KR+A+ +K KRK AL
Sbjct: 101 AEKVELLQKGDESRAAIVAETKRKRKASMTKKSKRKYRAL 140
>gi|303324301|ref|XP_003072138.1| Peptidyl-tRNA hydrolase domain containing protein [Coccidioides
posadasii C735 delta SOWgp]
gi|240111848|gb|EER29993.1| Peptidyl-tRNA hydrolase domain containing protein [Coccidioides
posadasii C735 delta SOWgp]
Length = 136
Score = 78.6 bits (192), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 63/100 (63%), Gaps = 1/100 (1%)
Query: 51 PKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELL 110
P IDE +I +++GSGPGGQ + KT++ V L H+PT V+K +RS S+NRK A ++L
Sbjct: 5 PTIDESEITGTYLKGSGPGGQKINKTSSAVQLIHLPTNTVVKSQATRSRSQNRKIALQIL 64
Query: 111 VAQWDVQVNGEDSLNAQIRRIDEKRRATQEQK-KRKLDAL 149
+ ++ G++S A + KR+A+ +K KRK AL
Sbjct: 65 AEKVELLQKGDESRAAIVAETKRKRKASMTKKSKRKYRAL 104
>gi|354543716|emb|CCE40438.1| hypothetical protein CPAR2_104740 [Candida parapsilosis]
Length = 177
Score = 78.6 bits (192), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 43/103 (41%), Positives = 58/103 (56%), Gaps = 12/103 (11%)
Query: 36 YHRNLVSNIDIYSTIPK-----------IDEKDIQERFVRGS-GPGGQAVAKTNNCVVLT 83
Y L + + IPK I E++I+E F++G GPGGQ + KTN+ V LT
Sbjct: 4 YPTRLFTTARALNAIPKKNKLPPRPKWLIKEEEIEESFIKGGRGPGGQKINKTNSKVQLT 63
Query: 84 HIPTGIVIKCHQSRSLSENRKTARELLVAQWDVQVNGEDSLNA 126
H PTGIV+ C +RS +NRK ARE+L + D N + S NA
Sbjct: 64 HKPTGIVVTCQATRSQEQNRKKAREILALKLDDLYNPKTSRNA 106
>gi|393220459|gb|EJD05945.1| hypothetical protein FOMMEDRAFT_145291 [Fomitiporia mediterranea
MF3/22]
Length = 299
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 48/67 (71%)
Query: 49 TIPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARE 108
T P+++E D++E FVRGSGPGGQ++ KT+N V L H PTGI + C ++RSL NR AR
Sbjct: 187 TKPELNEADLEESFVRGSGPGGQSINKTSNNVQLLHKPTGIRVTCQETRSLQTNRMIARR 246
Query: 109 LLVAQWD 115
L+ + D
Sbjct: 247 NLIEKLD 253
>gi|406909990|gb|EKD50121.1| peptide chain release factor [uncultured bacterium]
Length = 192
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/110 (40%), Positives = 67/110 (60%), Gaps = 4/110 (3%)
Query: 37 HRNLVSNIDIYSTIPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQS 96
H L++ ++T+ IDEKDI ERF+RGSG GGQ + KT+NCV L H PTG I+C QS
Sbjct: 79 HVKLLALSQRFATL-GIDEKDIIERFIRGSGKGGQKINKTSNCVQLVHTPTGRCIRCQQS 137
Query: 97 RSLSENRKTARELLVAQWDVQVNG---EDSLNAQIRRIDEKRRATQEQKK 143
R +ENR AR L Q + ++ + + I+++ E+ R + ++K
Sbjct: 138 RDRNENRYLARCSLADQIENEMTSALLKQARQTHIKQVAERVRLSHLRRK 187
>gi|443925843|gb|ELU44604.1| RF-1 domain-containing protein [Rhizoctonia solani AG-1 IA]
Length = 266
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/62 (54%), Positives = 49/62 (79%)
Query: 50 IPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTAREL 109
IP++ E+D++E FVRGSGPGGQA+ KT++ V L H PTGI ++C +RS +NRK AR++
Sbjct: 136 IPELREEDLEEMFVRGSGPGGQAINKTSSSVSLIHRPTGIRVQCQATRSREQNRKIARKI 195
Query: 110 LV 111
+V
Sbjct: 196 MV 197
>gi|170575451|ref|XP_001893249.1| hypothetical protein Bm1_08890 [Brugia malayi]
gi|158600871|gb|EDP37928.1| hypothetical protein Bm1_08890 [Brugia malayi]
Length = 116
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 60/95 (63%)
Query: 61 RFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVAQWDVQVNG 120
+ + G GPGGQ V T N V + H+PTG+V++ HQSR L EN + A E L D +NG
Sbjct: 7 KVISGWGPGGQKVNMTKNAVTIKHVPTGVVVRVHQSRLLQENIEIALERLKHAVDRHLNG 66
Query: 121 EDSLNAQIRRIDEKRRATQEQKKRKLDALKKAWKE 155
E+S +AQ+ R++ +R A ++K+ + +KK + +
Sbjct: 67 ENSYDAQLERMERERGAKNKRKRAVIREMKKIYAQ 101
>gi|353234841|emb|CCA66862.1| related to polypeptide chain release factors [Piriformospora indica
DSM 11827]
Length = 265
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 49/70 (70%)
Query: 50 IPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTAREL 109
IP ++E D++E FV+G GPGGQ + K + V L HIP+G+ I+C ++RSL ENR+ AR+L
Sbjct: 158 IPALNEDDLEESFVKGGGPGGQCINKRSTNVDLLHIPSGLRIQCQETRSLQENRRIARKL 217
Query: 110 LVAQWDVQVN 119
L + D N
Sbjct: 218 LARKLDELYN 227
>gi|50545671|ref|XP_500374.1| YALI0B01144p [Yarrowia lipolytica]
gi|49646240|emb|CAG82589.1| YALI0B01144p [Yarrowia lipolytica CLIB122]
Length = 154
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 49/74 (66%)
Query: 38 RNLVSNIDIYSTIPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSR 97
R L+ PK+DE +I+E F+RGSGPGGQ + + + +THIPTG+V+ ++R
Sbjct: 13 RALLKKTPQMPPRPKVDENEIRESFIRGSGPGGQCINRRSTRCQITHIPTGLVVSSQKTR 72
Query: 98 SLSENRKTARELLV 111
SL ENRK AR++L
Sbjct: 73 SLEENRKIARQILA 86
>gi|403172972|ref|XP_003332081.2| hypothetical protein PGTG_13448 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375170075|gb|EFP87662.2| hypothetical protein PGTG_13448 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 110
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/62 (58%), Positives = 43/62 (69%)
Query: 50 IPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTAREL 109
IP +DE ++ E+FVRGSGPGGQAV KTNN V L H PTGI ++ H RS NR AR +
Sbjct: 35 IPPLDENELIEQFVRGSGPGGQAVNKTNNAVSLIHKPTGIRVQAHTHRSREANRNQARRV 94
Query: 110 LV 111
L
Sbjct: 95 LA 96
>gi|344232760|gb|EGV64633.1| hypothetical protein CANTEDRAFT_120400 [Candida tenuis ATCC 10573]
Length = 164
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/72 (52%), Positives = 50/72 (69%), Gaps = 1/72 (1%)
Query: 53 IDEKDIQERFVRG-SGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
I E+DI+E F++G SGPGGQ + KTN+ V L HIPTGIV+ SRS +NR+ ARE+L
Sbjct: 39 IKEEDIEESFIKGGSGPGGQKINKTNSKVQLKHIPTGIVVTSQHSRSQEQNRQKAREILA 98
Query: 112 AQWDVQVNGEDS 123
+ D+ NG S
Sbjct: 99 EKLDLMENGPKS 110
>gi|118396926|ref|XP_001030799.1| Peptidyl-tRNA hydrolase domain containing protein [Tetrahymena
thermophila]
gi|89285114|gb|EAR83136.1| Peptidyl-tRNA hydrolase domain containing protein [Tetrahymena
thermophila SB210]
Length = 636
Score = 77.4 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 38/73 (52%), Positives = 54/73 (73%)
Query: 51 PKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELL 110
P+IDEKD++ +FV+GSGPGGQ+V KT+N VL H PTGI ++ H SR L +N++ + L
Sbjct: 520 PQIDEKDLEWKFVKGSGPGGQSVNKTSNNAVLIHKPTGIQVRSHASRELDKNKQYCMKQL 579
Query: 111 VAQWDVQVNGEDS 123
+ DV +NGE+S
Sbjct: 580 SEKLDVLINGENS 592
>gi|401423431|ref|XP_003876202.1| peptide chain release factor-like protein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322492443|emb|CBZ27717.1| peptide chain release factor-like protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 439
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 50/75 (66%), Gaps = 7/75 (9%)
Query: 46 IYSTIPKID-------EKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRS 98
+++ +P +D E D + FVRGSGPGGQ + ++NCVVLTH P+GI +KCHQSRS
Sbjct: 272 VFTMMPVLDPVSVDVHESDCKIDFVRGSGPGGQGMQSSSNCVVLTHKPSGISVKCHQSRS 331
Query: 99 LSENRKTARELLVAQ 113
N++ A +++ Q
Sbjct: 332 ALGNKELALQMVAQQ 346
>gi|157870704|ref|XP_001683902.1| peptide chain release factor-like protein [Leishmania major strain
Friedlin]
gi|68126969|emb|CAJ05291.1| peptide chain release factor-like protein [Leishmania major strain
Friedlin]
Length = 439
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 50/75 (66%), Gaps = 7/75 (9%)
Query: 46 IYSTIPKID-------EKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRS 98
+++ +P +D E D + FVRGSGPGGQ + ++NCVVLTH P+GI +KCHQSRS
Sbjct: 272 VFTMMPVLDPVSVDVHENDCKIDFVRGSGPGGQGMQSSSNCVVLTHKPSGISVKCHQSRS 331
Query: 99 LSENRKTARELLVAQ 113
N++ A +++ Q
Sbjct: 332 ALGNKELALQMVAQQ 346
>gi|400598659|gb|EJP66368.1| RF-1 domain-containing protein [Beauveria bassiana ARSEF 2860]
Length = 200
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 59/91 (64%)
Query: 55 EKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVAQW 114
+ +++E F++GSGPGGQ + KTN+ V L HIPTGIV+K +RS S+NRK ARE+L +
Sbjct: 38 DSELEESFLKGSGPGGQKINKTNSAVQLKHIPTGIVVKSQATRSRSQNRKHAREILAQKL 97
Query: 115 DVQVNGEDSLNAQIRRIDEKRRATQEQKKRK 145
D G +S + + +KR + +K R+
Sbjct: 98 DDLRRGGESRANIVGAVKKKRADSAAKKSRR 128
>gi|402225296|gb|EJU05357.1| hypothetical protein DACRYDRAFT_92714 [Dacryopinax sp. DJM-731 SS1]
Length = 263
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 50/70 (71%)
Query: 50 IPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTAREL 109
+P + +D++E FVRGSGPGGQA+ KT++CV L H PTGI + +RS +NRK AR++
Sbjct: 143 LPVLKAEDLEESFVRGSGPGGQAINKTSSCVSLIHRPTGIRVLAQPTRSRQQNRKIARKI 202
Query: 110 LVAQWDVQVN 119
L+ + D +N
Sbjct: 203 LLDKLDQLMN 212
>gi|295666315|ref|XP_002793708.1| hypothetical protein PAAG_04618 [Paracoccidioides sp. 'lutzii'
Pb01]
gi|226278002|gb|EEH33568.1| hypothetical protein PAAG_04618 [Paracoccidioides sp. 'lutzii'
Pb01]
Length = 175
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 61/95 (64%)
Query: 51 PKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELL 110
PK++ +I +++GSGPGGQA+ KTN+ V L H PTGIV+K +RS ++N+K A +L
Sbjct: 42 PKLNPAEITGTYLKGSGPGGQAINKTNSAVQLIHKPTGIVVKSQATRSRTQNQKIAMGIL 101
Query: 111 VAQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRK 145
+ ++ + G+ S A + +KR+A +K R+
Sbjct: 102 AEKVELHLKGDKSRAAIVAETKKKRKARSVKKARR 136
>gi|407846678|gb|EKG02695.1| peptide chain release factor 1, putative [Trypanosoma cruzi]
Length = 459
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 33/61 (54%), Positives = 44/61 (72%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
+ E D + FVRGSGPGGQ + ++N V LTHIP+GI +KCHQSRS N++TA +L+
Sbjct: 306 VHENDCKIEFVRGSGPGGQGMQSSSNAVCLTHIPSGISVKCHQSRSALGNKETALQLVAQ 365
Query: 113 Q 113
Q
Sbjct: 366 Q 366
>gi|146088922|ref|XP_001466182.1| peptide chain release factor-like protein [Leishmania infantum
JPCM5]
gi|134070284|emb|CAM68621.1| peptide chain release factor-like protein [Leishmania infantum
JPCM5]
Length = 439
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 51/79 (64%), Gaps = 7/79 (8%)
Query: 46 IYSTIPKID-------EKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRS 98
+++ +P +D E D + FVRGSGPGGQ + ++NCVVLTH P+GI +KCHQSRS
Sbjct: 272 VFTMMPVLDPVSVDVHESDCKIDFVRGSGPGGQGMQSSSNCVVLTHKPSGISVKCHQSRS 331
Query: 99 LSENRKTARELLVAQWDVQ 117
N++ A + + Q VQ
Sbjct: 332 ALGNKELALQTVAQQILVQ 350
>gi|71393327|ref|XP_802218.1| peptide chain release factor 1 [Trypanosoma cruzi strain CL Brener]
gi|70859733|gb|EAN80772.1| peptide chain release factor 1, putative [Trypanosoma cruzi]
Length = 270
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 45/65 (69%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
+ E D + FVRGSGPGGQ + ++N V LTHIP+GI +KCHQSRS N++TA +L+
Sbjct: 117 VHENDCKIEFVRGSGPGGQGMQSSSNAVCLTHIPSGISVKCHQSRSALGNKETALQLVAQ 176
Query: 113 QWDVQ 117
Q Q
Sbjct: 177 QLLAQ 181
>gi|398016586|ref|XP_003861481.1| peptide chain release factor-like protein [Leishmania donovani]
gi|322499707|emb|CBZ34781.1| peptide chain release factor-like protein [Leishmania donovani]
Length = 439
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 51/79 (64%), Gaps = 7/79 (8%)
Query: 46 IYSTIPKID-------EKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRS 98
+++ +P +D E D + FVRGSGPGGQ + ++NCVVLTH P+GI +KCHQSRS
Sbjct: 272 VFTMMPVLDPVSVDVHESDCKIDFVRGSGPGGQGMQSSSNCVVLTHKPSGISVKCHQSRS 331
Query: 99 LSENRKTARELLVAQWDVQ 117
N++ A + + Q VQ
Sbjct: 332 ALGNKELALQTVAQQILVQ 350
>gi|452986667|gb|EME86423.1| hypothetical protein MYCFIDRAFT_162030, partial [Pseudocercospora
fijiensis CIRAD86]
Length = 141
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/111 (40%), Positives = 64/111 (57%), Gaps = 6/111 (5%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
I E DI+E F++G+GPGGQ + KT++ V L H+PTGIV+K +RS +NRK AR +L
Sbjct: 3 IPESDIEESFLKGTGPGGQKINKTSSAVQLKHLPTGIVVKNQATRSREQNRKNARRILGE 62
Query: 113 QWDVQVNGEDSLNAQIRRIDEKRRATQEQKK-----RKLDALKKAWKERED 158
+ + G S A ++ E+R+ KK RKLD A K +D
Sbjct: 63 KLEDMEKGPLSRTA-LKAEKERRKKASASKKARRKYRKLDEANAASKSEDD 112
>gi|406968596|gb|EKD93410.1| Class I peptide chain release factor [uncultured bacterium]
Length = 138
Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 70/111 (63%), Gaps = 1/111 (0%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
KI +DI E+FVRGSG GGQ + KT++CVVL H+P+G ++C + R S+NR +A +LL+
Sbjct: 19 KILPEDISEQFVRGSGAGGQKINKTSSCVVLKHLPSGTEVRCQKHREQSKNRLSAYKLLI 78
Query: 112 AQWDVQVNGEDSLNA-QIRRIDEKRRATQEQKKRKLDALKKAWKEREDRRN 161
+ + +V G S +I +I +++R ++ K K+ KK E++ R
Sbjct: 79 LKIEDKVLGAKSERMKKIHKIIKQQRKRSKRAKEKVLQAKKLQTEKKQSRK 129
>gi|310792386|gb|EFQ27913.1| RF-1 domain-containing protein [Glomerella graminicola M1.001]
Length = 193
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 52/72 (72%)
Query: 55 EKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVAQW 114
+ +I+E +++GSGPGGQ + KT++ V L HIPTG+V+K +RS ++NRK ARE+L +
Sbjct: 50 DSEIEESYLKGSGPGGQKINKTSSAVQLKHIPTGVVVKSQATRSRTQNRKIAREILAQKL 109
Query: 115 DVQVNGEDSLNA 126
D NG+ S +A
Sbjct: 110 DDLQNGDQSRSA 121
>gi|187736226|ref|YP_001878338.1| peptide chain release factor [Akkermansia muciniphila ATCC BAA-835]
gi|187426278|gb|ACD05557.1| peptide chain release factor [Akkermansia muciniphila ATCC BAA-835]
Length = 120
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 36/59 (61%), Positives = 40/59 (67%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
I E+D++E FVRGSG GGQ V KTNNCV L H PTGI +KCH RS NR AR L
Sbjct: 19 IREQDLEESFVRGSGRGGQKVNKTNNCVYLRHTPTGIAVKCHADRSRELNRFLARRELC 77
>gi|326469360|gb|EGD93369.1| peptidyl-tRNA hydrolase [Trichophyton tonsurans CBS 112818]
gi|326483473|gb|EGE07483.1| hypothetical protein TEQG_06610 [Trichophyton equinum CBS 127.97]
Length = 191
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 50/76 (65%)
Query: 51 PKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELL 110
P IDE +I +++GSGPGGQ + KT++ V L HIPT V+KC +RS S+NRK A+ +L
Sbjct: 47 PTIDESEITGTYLKGSGPGGQKINKTSSAVQLIHIPTNTVVKCQATRSQSQNRKIAKRIL 106
Query: 111 VAQWDVQVNGEDSLNA 126
+ ++ GE S A
Sbjct: 107 AEKIELLEKGEQSRAA 122
>gi|226293278|gb|EEH48698.1| hypothetical protein PADG_04777 [Paracoccidioides brasiliensis
Pb18]
Length = 177
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 61/95 (64%)
Query: 51 PKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELL 110
PK++ ++ +++GSGPGGQA+ KTN+ V L H PTGIV+K +RS ++N+K A +L
Sbjct: 42 PKLNPAEVTGTYLKGSGPGGQAINKTNSAVQLIHKPTGIVVKSQATRSRTQNQKIAMGIL 101
Query: 111 VAQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRK 145
+ ++ + G+ S A + +KR+A +K R+
Sbjct: 102 AEKVELHLKGDKSRAAIVAETKKKRKARSVKKARR 136
>gi|149245034|ref|XP_001527051.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
gi|146449445|gb|EDK43701.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
Length = 172
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 52/74 (70%), Gaps = 1/74 (1%)
Query: 53 IDEKDIQERFVRG-SGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
I+E +++E+F+ G SGPGGQ + KTN+ V LTH PTGIV+ C +SRS +NRK ARE+L
Sbjct: 32 INEDELEEKFLHGGSGPGGQKINKTNSKVQLTHKPTGIVVSCQESRSQDQNRKKAREILA 91
Query: 112 AQWDVQVNGEDSLN 125
+ + N + S N
Sbjct: 92 LKLEDIQNPQGSRN 105
>gi|268537314|ref|XP_002633793.1| Hypothetical protein CBG03485 [Caenorhabditis briggsae]
Length = 137
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 65/112 (58%)
Query: 50 IPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTAREL 109
P++ + D +++++ G GPGGQ V N V LTH PTG V+K H+SR L +N + A E
Sbjct: 24 FPEVKKDDCEQKYISGWGPGGQKVNTAQNAVQLTHRPTGTVVKVHESRLLPKNIEIAFER 83
Query: 110 LVAQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKLDALKKAWKEREDRRN 161
+ D Q+NG++ Q++R+ + + +K+ + KK +K+ + +N
Sbjct: 84 MKVVLDRQINGDNCYEEQLKRLQQAKEVKANKKRDQARKEKKVFKKELEEKN 135
>gi|392577361|gb|EIW70490.1| hypothetical protein TREMEDRAFT_60995 [Tremella mesenterica DSM
1558]
Length = 146
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 51/81 (62%), Gaps = 7/81 (8%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTAR---- 107
+I E D++ERF +G GPGGQA+ KTN+ V L H+PTGI ++ +RS ENRK AR
Sbjct: 2 EIPESDLEERFDKGRGPGGQAINKTNSAVSLIHLPTGIRVQAQPTRSREENRKAARRILA 61
Query: 108 ---ELLVAQWDVQVNGEDSLN 125
ELL AQ + D++N
Sbjct: 62 EKLELLSAQKAFEEASSDNIN 82
>gi|68489326|ref|XP_711504.1| hypothetical protein CaO19.12943 [Candida albicans SC5314]
gi|68489375|ref|XP_711480.1| hypothetical protein CaO19.5488 [Candida albicans SC5314]
gi|46432785|gb|EAK92252.1| hypothetical protein CaO19.5488 [Candida albicans SC5314]
gi|46432811|gb|EAK92277.1| hypothetical protein CaO19.12943 [Candida albicans SC5314]
gi|238882388|gb|EEQ46026.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 171
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 58/101 (57%), Gaps = 12/101 (11%)
Query: 38 RNLVSNIDIYSTIPK-----------IDEKDIQERFVRGS-GPGGQAVAKTNNCVVLTHI 85
R+L ++ + IPK I E+DI+E+F+ G GPGGQ + KTN+ V LTHI
Sbjct: 9 RSLFTSNSLKYGIPKKNKLPPRPKHLIKEEDIEEKFLHGGRGPGGQKINKTNSKVQLTHI 68
Query: 86 PTGIVIKCHQSRSLSENRKTARELLVAQWDVQVNGEDSLNA 126
PTG+V+ C +RS +NR ARE L + D N S NA
Sbjct: 69 PTGMVVSCQATRSQEQNRAIAREKLALKLDDFYNPGTSRNA 109
>gi|398407371|ref|XP_003855151.1| hypothetical protein MYCGRDRAFT_37496 [Zymoseptoria tritici IPO323]
gi|339475035|gb|EGP90127.1| hypothetical protein MYCGRDRAFT_37496 [Zymoseptoria tritici IPO323]
Length = 178
Score = 75.9 bits (185), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 33/58 (56%), Positives = 45/58 (77%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELL 110
I E DI E F++GSGPGGQ + KT++ V L H+PTGIV+KC ++RS ++NRK AR +L
Sbjct: 40 IVESDITEAFLKGSGPGGQKINKTSSAVQLKHLPTGIVVKCQETRSRAQNRKLARRIL 97
>gi|225683891|gb|EEH22175.1| predicted protein [Paracoccidioides brasiliensis Pb03]
Length = 247
Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 61/95 (64%)
Query: 51 PKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELL 110
PK++ ++ +++GSGPGGQA+ KTN+ V L H PTGIV+K +RS ++N+K A +L
Sbjct: 114 PKLNPAEVTGTYLKGSGPGGQAINKTNSAVQLIHKPTGIVVKSQATRSRTQNQKIAMGIL 173
Query: 111 VAQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRK 145
+ ++ + G+ S A + +KR+A +K R+
Sbjct: 174 AEKVELHLKGDKSRAAIVAETKKKRKARSVKKARR 208
>gi|154338826|ref|XP_001565635.1| peptide chain release factor-like protein [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134062687|emb|CAM39130.1| peptide chain release factor-like protein [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 302
Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 49/75 (65%), Gaps = 7/75 (9%)
Query: 46 IYSTIPKID-------EKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRS 98
+++ +P +D E D + FVRGSGPGGQ + ++NCVVLTH P+GI +KCHQ RS
Sbjct: 135 VFTLMPVLDPVSVDVHESDCKIDFVRGSGPGGQGMQSSSNCVVLTHKPSGISVKCHQCRS 194
Query: 99 LSENRKTARELLVAQ 113
N++ A +++ Q
Sbjct: 195 ALGNKELALQMVAQQ 209
>gi|406695093|gb|EKC98408.1| hypothetical protein A1Q2_07422 [Trichosporon asahii var. asahii
CBS 8904]
Length = 260
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 49/67 (73%)
Query: 50 IPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTAREL 109
+P +DE +++E+FVRG GPGGQA+ KTN+ V L H PTGI I+ +RS ++NR AR++
Sbjct: 119 VPDLDESELEEKFVRGRGPGGQAINKTNSSVSLLHKPTGIRIQSQPTRSRAQNRVIARQI 178
Query: 110 LVAQWDV 116
L + D+
Sbjct: 179 LKERLDL 185
>gi|401885354|gb|EJT49473.1| hypothetical protein A1Q1_01377 [Trichosporon asahii var. asahii
CBS 2479]
Length = 232
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 49/67 (73%)
Query: 50 IPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTAREL 109
+P +DE +++E+FVRG GPGGQA+ KTN+ V L H PTGI I+ +RS ++NR AR++
Sbjct: 91 VPDLDESELEEKFVRGRGPGGQAINKTNSSVSLLHKPTGIRIQSQPTRSRAQNRVIARQI 150
Query: 110 LVAQWDV 116
L + D+
Sbjct: 151 LKERLDL 157
>gi|407404213|gb|EKF29770.1| peptide chain release factor 1, putative [Trypanosoma cruzi
marinkellei]
Length = 459
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/61 (52%), Positives = 43/61 (70%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
+ E D + FVRGSGPGGQ + ++N V LTHIP+GI +KCHQSRS N++ A +L+
Sbjct: 306 VHENDCKIEFVRGSGPGGQGMQSSSNAVCLTHIPSGISVKCHQSRSALGNKEIALQLVAQ 365
Query: 113 Q 113
Q
Sbjct: 366 Q 366
>gi|296423832|ref|XP_002841456.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295637696|emb|CAZ85647.1| unnamed protein product [Tuber melanosporum]
Length = 237
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 70/129 (54%), Gaps = 27/129 (20%)
Query: 51 PKIDEKDIQERFVRGSGPGGQ-----------------------AVAKTNNCVVLTHIPT 87
P + E++I+E F++GSGPGGQ AV KT++ V L H+PT
Sbjct: 46 PSVKEEEIEESFLKGSGPGGQKSESQYPLHCMLLRTHVTPGNISAVNKTSSAVQLKHLPT 105
Query: 88 GIVIKCHQSRSLSENRKTARELLVAQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKR--- 144
GIV+K +RS S+NRK AR++L + + G +S + D +R+A++ +K +
Sbjct: 106 GIVVKSQATRSRSQNRKIARKILAEKLEFMERGTESRVGALAERDRRRKASKTKKAKRKY 165
Query: 145 -KLDALKKA 152
KL+A K A
Sbjct: 166 AKLEADKGA 174
>gi|392901269|ref|NP_001255661.1| Protein T23B5.4, isoform a [Caenorhabditis elegans]
gi|313004791|emb|CAE17950.2| Protein T23B5.4, isoform a [Caenorhabditis elegans]
Length = 133
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 51/82 (62%)
Query: 50 IPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTAREL 109
P + ++D +++++ G GPGGQ V N V LTH+PTG V+K H+SR L +N A E
Sbjct: 24 FPDVRKEDCEQKYISGWGPGGQKVNTAQNAVQLTHLPTGTVLKVHESRLLPKNIDIAFER 83
Query: 110 LVAQWDVQVNGEDSLNAQIRRI 131
+ D Q+NGE+ Q++R+
Sbjct: 84 MKFVLDRQINGENCYEEQLKRL 105
>gi|71650872|ref|XP_814125.1| peptide chain release factor 1 [Trypanosoma cruzi strain CL Brener]
gi|70879071|gb|EAN92274.1| peptide chain release factor 1, putative [Trypanosoma cruzi]
Length = 456
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/61 (52%), Positives = 43/61 (70%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
+ E D + FVRGSGPGGQ + ++N V LTHIP+GI +KCHQSRS N++ A +L+
Sbjct: 303 VHENDCKIEFVRGSGPGGQGMQSSSNAVCLTHIPSGISVKCHQSRSALGNKEIALQLVAQ 362
Query: 113 Q 113
Q
Sbjct: 363 Q 363
>gi|241951644|ref|XP_002418544.1| conserved hypothetical protein [Candida dubliniensis CD36]
gi|223641883|emb|CAX43846.1| conserved hypothetical protein [Candida dubliniensis CD36]
Length = 171
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 58/101 (57%), Gaps = 12/101 (11%)
Query: 38 RNLVSNIDIYSTIPK-----------IDEKDIQERFVRGS-GPGGQAVAKTNNCVVLTHI 85
R+L ++ + IPK I E+D++E+F+ G GPGGQ + K+N+ V LTHI
Sbjct: 9 RSLFTSNSLKYGIPKKNKLPPRPKHLIKEEDLEEKFLHGGRGPGGQKINKSNSKVQLTHI 68
Query: 86 PTGIVIKCHQSRSLSENRKTARELLVAQWDVQVNGEDSLNA 126
PTG+V+ C +RS +NR ARE L + D N S NA
Sbjct: 69 PTGMVVSCQATRSQEQNRAIAREKLALKLDDYYNPGTSRNA 109
>gi|341881932|gb|EGT37867.1| hypothetical protein CAEBREN_16253 [Caenorhabditis brenneri]
Length = 421
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 50/80 (62%)
Query: 50 IPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTAREL 109
P++ ++D +++++ G GPGGQ V N V LTHIPTG V+K H+SR L +N A E
Sbjct: 24 FPEVRKEDCEQKYISGWGPGGQKVNTAQNAVQLTHIPTGTVVKVHESRLLPKNIDIAFER 83
Query: 110 LVAQWDVQVNGEDSLNAQIR 129
+ D Q+NGE+ Q++
Sbjct: 84 MKFVLDRQINGENCYEEQLK 103
>gi|345560671|gb|EGX43796.1| hypothetical protein AOL_s00215g532 [Arthrobotrys oligospora ATCC
24927]
Length = 234
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 56/90 (62%), Gaps = 9/90 (10%)
Query: 51 PKIDEKDIQERFVRGSGPGG---------QAVAKTNNCVVLTHIPTGIVIKCHQSRSLSE 101
PK+DE DI+E+F++GSGPG + KT++ V L HIPTGIV+K ++RS +
Sbjct: 48 PKVDENDIEEKFLKGSGPGMVFPHDADYIEEQNKTSSAVQLRHIPTGIVVKSQETRSREQ 107
Query: 102 NRKTARELLVAQWDVQVNGEDSLNAQIRRI 131
NRK AR+LL ++ + GE S N I +
Sbjct: 108 NRKIARQLLASKLEDIEKGEQSRNNVINEV 137
>gi|171914371|ref|ZP_02929841.1| Class I peptide chain release factor [Verrucomicrobium spinosum DSM
4136]
Length = 141
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 64/104 (61%), Gaps = 10/104 (9%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
I E+D++E F+RG+G GGQ + KT++ VVLTH+PTG+ ++C + RS S NR ARE L +
Sbjct: 24 IREEDLEETFIRGTGAGGQKINKTSSTVVLTHVPTGLEVRCQRERSQSLNRVVAREELCS 83
Query: 113 QWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKLDALKKAWKER 156
+ E+ L A + +RR E+KKR+ + KER
Sbjct: 84 KL------EERLAA----VKLERRNEVEKKKRQNRKRPRGLKER 117
>gi|452845154|gb|EME47087.1| hypothetical protein DOTSEDRAFT_85667 [Dothistroma septosporum
NZE10]
Length = 191
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 44/58 (75%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELL 110
I E DI E F++GSGPGGQ + KT++ V L H+PTGIV+K ++RS +NR+TAR +L
Sbjct: 41 IPETDITESFLKGSGPGGQKINKTSSAVQLKHLPTGIVVKSQETRSREQNRRTARRIL 98
>gi|327309086|ref|XP_003239234.1| peptidyl-tRNA hydrolase [Trichophyton rubrum CBS 118892]
gi|326459490|gb|EGD84943.1| peptidyl-tRNA hydrolase [Trichophyton rubrum CBS 118892]
Length = 190
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 50/76 (65%)
Query: 51 PKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELL 110
P ID+ +I +++GSGPGGQ + KT++ V L HIPT V+KC +RS S+NRK A+ +L
Sbjct: 47 PTIDDSEITGTYLKGSGPGGQKINKTSSAVQLIHIPTNTVVKCQATRSQSQNRKIAKRIL 106
Query: 111 VAQWDVQVNGEDSLNA 126
+ ++ GE S A
Sbjct: 107 AEKIELLEKGEQSRAA 122
>gi|453087926|gb|EMF15967.1| hypothetical protein SEPMUDRAFT_81256 [Mycosphaerella populorum
SO2202]
Length = 198
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/58 (58%), Positives = 43/58 (74%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELL 110
I EKDI E F++GSGPGGQ + KT++ V L HIPTGIV+K +RS +NRK AR +L
Sbjct: 43 ISEKDIIESFLKGSGPGGQKINKTSSAVQLKHIPTGIVVKNQATRSRDQNRKNARRIL 100
>gi|315053701|ref|XP_003176225.1| hypothetical protein MGYG_00314 [Arthroderma gypseum CBS 118893]
gi|311338071|gb|EFQ97273.1| hypothetical protein MGYG_00314 [Arthroderma gypseum CBS 118893]
Length = 192
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 52/81 (64%)
Query: 51 PKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELL 110
P ID+ +I +++GSGPGGQ + KT++ V L HIPT V+KC +RS S+NRK A+ +L
Sbjct: 47 PTIDDSEITGTYLKGSGPGGQKINKTSSAVQLIHIPTNTVVKCQATRSQSQNRKIAKRIL 106
Query: 111 VAQWDVQVNGEDSLNAQIRRI 131
+ ++ GE S A + +
Sbjct: 107 AEKIELLEKGEQSRAAIVNNV 127
>gi|240280457|gb|EER43961.1| conserved hypothetical protein [Ajellomyces capsulatus H143]
Length = 186
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 51/73 (69%)
Query: 51 PKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELL 110
PK+D ++ +++G+GPGGQA+ KTN+ V L H PTGIV+K +RS ++N+K A +L
Sbjct: 35 PKLDPSEVTGSYLKGTGPGGQAINKTNSAVQLIHKPTGIVVKSQATRSRTQNQKIAMGIL 94
Query: 111 VAQWDVQVNGEDS 123
+ ++Q+ GE S
Sbjct: 95 AEKVELQLKGEQS 107
>gi|341881935|gb|EGT37870.1| hypothetical protein CAEBREN_31848 [Caenorhabditis brenneri]
Length = 131
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 50/80 (62%)
Query: 50 IPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTAREL 109
P++ ++D +++++ G GPGGQ V N V LTHIPTG V+K H+SR L +N A E
Sbjct: 18 FPEVRKEDCEQKYISGWGPGGQKVNTAQNAVQLTHIPTGTVVKVHESRLLPKNIDIAFER 77
Query: 110 LVAQWDVQVNGEDSLNAQIR 129
+ D Q+NGE+ Q++
Sbjct: 78 MKFVLDRQINGENCYEEQLK 97
>gi|322421630|ref|YP_004200853.1| class I peptide chain release factor [Geobacter sp. M18]
gi|320128017|gb|ADW15577.1| Class I peptide chain release factor [Geobacter sp. M18]
Length = 143
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 47/68 (69%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
+ EKD++ERFV SG GGQ V K+++CV L HIP+G+ +KC +SRS S NR AR LL+
Sbjct: 23 VAEKDLEERFVHASGRGGQHVNKSSSCVYLKHIPSGLEVKCMESRSQSLNRFLARRLLLE 82
Query: 113 QWDVQVNG 120
+ + G
Sbjct: 83 KLEGAGGG 90
>gi|119467602|ref|XP_001257607.1| peptidyl-tRNA hydrolase domain protein [Neosartorya fischeri NRRL
181]
gi|119405759|gb|EAW15710.1| peptidyl-tRNA hydrolase domain protein [Neosartorya fischeri NRRL
181]
Length = 208
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 56/89 (62%), Gaps = 2/89 (2%)
Query: 40 LVSNIDIYSTIP--KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSR 97
L S++ P KID+ D+ +++G+GPGGQ + KTN+ V L H PTGIV+K +R
Sbjct: 38 LASSLSAKQLPPRLKIDDADLTVSYLKGTGPGGQKINKTNSAVQLIHKPTGIVVKSQATR 97
Query: 98 SLSENRKTARELLVAQWDVQVNGEDSLNA 126
S S+N K AR++L + + + G+ S NA
Sbjct: 98 SRSQNEKIARQILADKVEELLKGDASRNA 126
>gi|399216586|emb|CCF73273.1| unnamed protein product [Babesia microti strain RI]
Length = 1420
Score = 73.2 bits (178), Expect = 3e-11, Method: Composition-based stats.
Identities = 44/108 (40%), Positives = 65/108 (60%), Gaps = 9/108 (8%)
Query: 43 NIDIYSTIPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSEN 102
N I++ K DE +E+F++GSGPGGQ + K+++CV L H +V+KC Q+R+L EN
Sbjct: 31 NKPIFTNSLKADE--FEEKFIKGSGPGGQKINKSSSCVQLIHKKYPLVVKCQQTRNLQEN 88
Query: 103 RKTARELL------VAQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKR 144
R ARE+L + + + V SL Q RRI + A +E+KKR
Sbjct: 89 RIIAREILQKKIFSIEKEEKMVGINLSLKEQ-RRILKLSDAEKERKKR 135
>gi|156064005|ref|XP_001597924.1| hypothetical protein SS1G_00010 [Sclerotinia sclerotiorum 1980]
gi|154690872|gb|EDN90610.1| hypothetical protein SS1G_00010 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 201
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 50/71 (70%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
IDE + E F+ GSGPGGQ + KT++ V L HIPTG+V+K +RS ++NRK AR++L
Sbjct: 59 IDEAEFTEVFLHGSGPGGQKINKTSSAVQLKHIPTGMVLKVQATRSRTQNRKIARQMLAE 118
Query: 113 QWDVQVNGEDS 123
+ ++ G++S
Sbjct: 119 RVELLEKGKES 129
>gi|154277694|ref|XP_001539684.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150413269|gb|EDN08652.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 187
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 51/73 (69%)
Query: 51 PKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELL 110
PK+D ++ +++G+GPGGQA+ KTN+ V L H PTGIV+K +RS ++N+K A +L
Sbjct: 35 PKLDLSEVTGSYLKGTGPGGQAINKTNSAVQLIHKPTGIVVKSQATRSRTQNQKIAMGIL 94
Query: 111 VAQWDVQVNGEDS 123
+ ++Q+ GE S
Sbjct: 95 AEKVELQLKGEQS 107
>gi|406912966|gb|EKD52465.1| hypothetical protein ACD_62C00013G0003 [uncultured bacterium]
Length = 137
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/104 (38%), Positives = 65/104 (62%), Gaps = 1/104 (0%)
Query: 58 IQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVAQWD-V 116
++E F+RGSG GGQ + KTN+CV LTH P+GIVI+C +RS +NR AR +L + + +
Sbjct: 26 LREEFIRGSGAGGQKINKTNSCVQLTHTPSGIVIRCQHTRSREQNRFFARRILCERLEAI 85
Query: 117 QVNGEDSLNAQIRRIDEKRRATQEQKKRKLDALKKAWKEREDRR 160
Q+ + ++ RI ++R + K K+ + KK E++ +R
Sbjct: 86 QLGKKSEKEKRLHRIRAQKRRRSRRAKDKMLSSKKFQGEKKKQR 129
>gi|50304901|ref|XP_452406.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49641539|emb|CAH01257.1| KLLA0C04642p [Kluyveromyces lactis]
Length = 168
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 54/81 (66%), Gaps = 7/81 (8%)
Query: 55 EKDIQERFVRGS-GPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELL--- 110
E+DI+E+F+ G GPGGQ + K N+ V L H+PTGIV+ C +RS +NRK ARE L
Sbjct: 45 ERDIEEKFLHGGRGPGGQKINKCNSKVQLRHVPTGIVVDCQATRSRDQNRKIAREKLALR 104
Query: 111 VAQWDVQVNGEDSLNAQIRRI 131
+AQW+ NG+ + ++ +I
Sbjct: 105 LAQWE---NGDQPIERELAKI 122
>gi|70984320|ref|XP_747675.1| peptidyl-tRNA hydrolase domain protein [Aspergillus fumigatus
Af293]
gi|66845302|gb|EAL85637.1| peptidyl-tRNA hydrolase domain protein [Aspergillus fumigatus
Af293]
gi|159122461|gb|EDP47582.1| peptidyl-tRNA hydrolase domain protein [Aspergillus fumigatus
A1163]
Length = 208
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 56/90 (62%), Gaps = 2/90 (2%)
Query: 39 NLVSNIDIYSTIP--KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQS 96
L S++ P KID+ D+ +++G+GPGGQ + KTN+ V L H PTGIV+K +
Sbjct: 37 TLASSLSAKQLPPRLKIDDADLTVSYLKGTGPGGQKINKTNSAVQLIHKPTGIVVKSQAT 96
Query: 97 RSLSENRKTARELLVAQWDVQVNGEDSLNA 126
RS S+N K AR++L + + + G+ S NA
Sbjct: 97 RSRSQNEKIARQILADKVEELLKGDASRNA 126
>gi|328852030|gb|EGG01179.1| hypothetical protein MELLADRAFT_92698 [Melampsora larici-populina
98AG31]
Length = 177
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/127 (37%), Positives = 70/127 (55%), Gaps = 22/127 (17%)
Query: 41 VSNIDIYSTIPKI---DEKDIQERFVRGSGPGGQAV-----------------AKTNN-C 79
S++ + S +PKI +E D+ E FVRGSGPGGQ + KTN
Sbjct: 23 TSSLFLPSKLPKIQKLNESDLIEEFVRGSGPGGQCINSLSFSQNMLMDDSCILKKTNFIS 82
Query: 80 VVLTHIPTGIVIKCHQSRSLSENRKTARELLVAQWDVQVN-GEDSLNAQIRRIDEKRRAT 138
V L H PTGI ++CH RS NRK AR++L + D+ +N G+ L + ++ +K+RA
Sbjct: 83 VSLIHKPTGIRVQCHAQRSRESNRKEARKILSEKVDLFLNPGKSKLEFKWQKARDKKRAK 142
Query: 139 QEQKKRK 145
Q+KR+
Sbjct: 143 IRQRKRR 149
>gi|71022895|ref|XP_761677.1| hypothetical protein UM05530.1 [Ustilago maydis 521]
gi|46101154|gb|EAK86387.1| hypothetical protein UM05530.1 [Ustilago maydis 521]
Length = 713
Score = 72.4 bits (176), Expect = 6e-11, Method: Composition-based stats.
Identities = 32/69 (46%), Positives = 46/69 (66%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
+DEKD+ E+F+RGSGPGGQA+ K + V LTH+PTG + C ++RS NR+ AR +
Sbjct: 600 LDEKDLAEKFIRGSGPGGQAINKLSTNVQLTHLPTGTKVTCQETRSRDRNRELARRRMSL 659
Query: 113 QWDVQVNGE 121
+ V G+
Sbjct: 660 TLEKLVRGD 668
>gi|255945923|ref|XP_002563729.1| Pc20g12440 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211588464|emb|CAP86573.1| Pc20g12440 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 186
Score = 72.4 bits (176), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 56/97 (57%), Gaps = 11/97 (11%)
Query: 38 RNLVSNIDIYSTIP-----------KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIP 86
R L + ++S P KI + DI +++G+GPGGQ + KTN+ V + H P
Sbjct: 12 RTLAAPARLFSQTPIVPAKPLPPRLKISDADISISYLKGTGPGGQKINKTNSAVQIIHKP 71
Query: 87 TGIVIKCHQSRSLSENRKTARELLVAQWDVQVNGEDS 123
+G+V+KC +RS S+N K AR LL + + NG++S
Sbjct: 72 SGVVVKCQATRSQSQNAKIARSLLADKIEALENGDNS 108
>gi|70934187|ref|XP_738357.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56514509|emb|CAH83815.1| conserved hypothetical protein [Plasmodium chabaudi chabaudi]
Length = 194
Score = 72.4 bits (176), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 70/114 (61%), Gaps = 13/114 (11%)
Query: 56 KDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTG---IVIKCHQSRSLSENRKTARELLVA 112
K+I+E F++G+G GGQ V KTNNCV++ + T IVIKCH+ R L +NR ARELL
Sbjct: 76 KNIEETFIKGTGKGGQKVNKTNNCVMIKYDRTNDDKIVIKCHKYRCLQQNRVYARELLYE 135
Query: 113 QWDVQVNG---EDSLNAQIRRIDEKR---RATQEQKKRKLDALKKAWKEREDRR 160
+ +N ED +N QI + EKR + T+ +K R ++ KK + + DR+
Sbjct: 136 KI-TSINNKAKEDIIN-QIEK--EKRQILKLTEAEKNRSINYKKKRSEIKSDRQ 185
>gi|388856138|emb|CCF50318.1| uncharacterized protein [Ustilago hordei]
Length = 422
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 46/69 (66%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
+DEKD+ E+F+RGSGPGGQA+ K + V L+HIPTG + C ++RS NR+ AR L
Sbjct: 312 LDEKDLAEKFIRGSGPGGQAINKLSTNVQLSHIPTGTKVTCQETRSRDRNRELARRRLSL 371
Query: 113 QWDVQVNGE 121
+ + GE
Sbjct: 372 TLEKLLRGE 380
>gi|451994802|gb|EMD87271.1| hypothetical protein COCHEDRAFT_1184107 [Cochliobolus
heterostrophus C5]
Length = 165
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 36/73 (49%), Positives = 49/73 (67%)
Query: 51 PKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELL 110
P +DE D+ E F++GSGPGGQ + KT++ V L HIPTGIV+K +RS NRK AR +L
Sbjct: 23 PVLDESDLIENFLKGSGPGGQKINKTSSAVQLKHIPTGIVVKYQDTRSREINRKMARRIL 82
Query: 111 VAQWDVQVNGEDS 123
+ + GED+
Sbjct: 83 QDRIEELELGEDA 95
>gi|425773906|gb|EKV12231.1| hypothetical protein PDIG_45560 [Penicillium digitatum PHI26]
gi|425782408|gb|EKV20318.1| hypothetical protein PDIP_17500 [Penicillium digitatum Pd1]
Length = 188
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 57/97 (58%), Gaps = 11/97 (11%)
Query: 38 RNLVSNIDIYSTIP-----------KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIP 86
R L + ++S P KI++ DI +++G+GPGGQ + KTN+ V + H P
Sbjct: 12 RTLAAPARLFSQTPIVPAKPLPPRLKINDADISISYLKGTGPGGQKINKTNSAVQIIHKP 71
Query: 87 TGIVIKCHQSRSLSENRKTARELLVAQWDVQVNGEDS 123
+G+VIKC +RS S+N K AR LL + + + G++S
Sbjct: 72 SGVVIKCQATRSQSQNAKIARSLLADRVEAREKGDNS 108
>gi|389582206|dbj|GAB64761.1| polypeptide chain release factor 2 [Plasmodium cynomolgi strain B]
Length = 192
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 43/102 (42%), Positives = 66/102 (64%), Gaps = 8/102 (7%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTG----IVIKCHQSRSLSENRKTARE 108
+ +KDI+E FV+G+G GGQ V KTNNCV++ + +G IVIKCH+ R L +NR ARE
Sbjct: 70 VFQKDIEESFVKGTGKGGQKVNKTNNCVMIRY-DSGEGEKIVIKCHKYRCLQKNRIYARE 128
Query: 109 LLVAQ-WDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKLDAL 149
LL + ++ N ED++ +I + EKRR + + K +++
Sbjct: 129 LLYDKITSIRDNLEDAITHEIEK--EKRRVLKPTDREKRESI 168
>gi|221052668|ref|XP_002261057.1| Polypeptide chain release factor 2 [Plasmodium knowlesi strain H]
gi|194247061|emb|CAQ38245.1| Polypeptide chain release factor 2, putative [Plasmodium knowlesi
strain H]
Length = 186
Score = 72.0 bits (175), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 45/110 (40%), Positives = 67/110 (60%), Gaps = 6/110 (5%)
Query: 56 KDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTG---IVIKCHQSRSLSENRKTARELLVA 112
KDI+E FV+G+G GGQ V KTNNCV++ + IVIKCH+ R L +NR ARELL
Sbjct: 67 KDIEETFVKGTGKGGQKVNKTNNCVMIKYDSGNGEKIVIKCHKYRCLQKNRIYARELLYD 126
Query: 113 Q-WDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKLDALKKAWKEREDRRN 161
+ ++ N ED++ +I + EKRR + + K +++K + E + N
Sbjct: 127 KITSMRENLEDAIIHEIEK--EKRRVLKPTDREKSESIKYKKRRSEVKNN 174
>gi|72386553|ref|XP_843701.1| peptide chain release factor 1 [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
gi|62175752|gb|AAX69880.1| peptide chain release factor 1, putative [Trypanosoma brucei]
gi|70800233|gb|AAZ10142.1| peptide chain release factor 1, putative [Trypanosoma brucei brucei
strain 927/4 GUTat10.1]
Length = 459
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 42/61 (68%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
+ EKD FVRGSGPGGQ + ++N V LTH P+GI +KCHQSRS N++ A +++
Sbjct: 306 VHEKDCNIEFVRGSGPGGQGMQSSSNAVCLTHKPSGISVKCHQSRSALGNKELALQMVAQ 365
Query: 113 Q 113
Q
Sbjct: 366 Q 366
>gi|363750438|ref|XP_003645436.1| hypothetical protein Ecym_3111 [Eremothecium cymbalariae
DBVPG#7215]
gi|356889070|gb|AET38619.1| Hypothetical protein Ecym_3111 [Eremothecium cymbalariae
DBVPG#7215]
Length = 186
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/117 (37%), Positives = 70/117 (59%), Gaps = 18/117 (15%)
Query: 55 EKDIQERFVRGS-GPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVAQ 113
E++++E F+ G GPGGQ + K N+ V L H+P+GIV++C ++RS NRK AR+ L A+
Sbjct: 57 EQEVEETFLHGGRGPGGQKINKCNSKVQLKHLPSGIVVECQETRSRENNRKLARQKLAAK 116
Query: 114 WDVQVNGEDSLN---------AQIRRIDEKRRATQEQKKRKLDALKKAWKEREDRRN 161
+ NG+ +L AQ +R K ++ Q+ ++ KLD+L ED+RN
Sbjct: 117 IAIWNNGDKALERDLALQQWVAQGKRSKHK-KSRQKHEQAKLDSL-------EDKRN 165
>gi|260947746|ref|XP_002618170.1| hypothetical protein CLUG_01629 [Clavispora lusitaniae ATCC 42720]
gi|238848042|gb|EEQ37506.1| hypothetical protein CLUG_01629 [Clavispora lusitaniae ATCC 42720]
Length = 180
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 50/75 (66%), Gaps = 1/75 (1%)
Query: 53 IDEKDIQERFVRGS-GPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
I E++I E F++G GPGGQ + K+N+ V LTH PTGIV+ C SRS +NRK ARE+L
Sbjct: 49 IKEEEIDEEFLKGGRGPGGQKINKSNSKVQLTHKPTGIVVTCQYSRSQEQNRKKAREILA 108
Query: 112 AQWDVQVNGEDSLNA 126
+ + + E+S A
Sbjct: 109 LKLEELQDPENSRTA 123
>gi|378731006|gb|EHY57465.1| peptide chain release factor RF-2 [Exophiala dermatitidis
NIH/UT8656]
Length = 314
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 50/73 (68%)
Query: 51 PKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELL 110
P + + +I +++G+GPGGQ + KTN+ LTH+PTGIV+KC +RS ++N + A+ LL
Sbjct: 180 PTLPDSEIHHVYLKGTGPGGQKINKTNSAAQLTHLPTGIVVKCQATRSRAQNHEIAKRLL 239
Query: 111 VAQWDVQVNGEDS 123
+ ++ G++S
Sbjct: 240 AEKVELLQKGDES 252
>gi|156094577|ref|XP_001613325.1| hypothetical protein [Plasmodium vivax Sal-1]
gi|148802199|gb|EDL43598.1| hypothetical protein, conserved [Plasmodium vivax]
Length = 196
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/98 (41%), Positives = 62/98 (63%), Gaps = 6/98 (6%)
Query: 56 KDIQERFVRGSGPGGQAVAKTNNCVVLTHIP---TGIVIKCHQSRSLSENRKTARELLVA 112
KDI+E F++G+G GGQ V KTNNCV++ + I+IKCH+ R L +NR ARELL
Sbjct: 77 KDIEETFIKGTGKGGQKVNKTNNCVMIRYASGEGEKIIIKCHKHRCLQKNRIYARELLYD 136
Query: 113 Q-WDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKLDAL 149
+ V+ N ED++ +I + EKRR + + K +++
Sbjct: 137 KITSVRDNLEDAITHEIEK--EKRRVLKPTDREKRESI 172
>gi|253702397|ref|YP_003023586.1| class I peptide chain release factor [Geobacter sp. M21]
gi|251777247|gb|ACT19828.1| Class I peptide chain release factor [Geobacter sp. M21]
Length = 132
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/59 (54%), Positives = 43/59 (72%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
+ E+ I+ERFV SG GGQ V K+++CV L H+PTG+ +KC +SRS S NR AR LL+
Sbjct: 23 VSEQQIEERFVHASGRGGQHVNKSSSCVYLKHLPTGVEVKCMESRSQSLNRFLARRLLL 81
>gi|443898234|dbj|GAC75571.1| hypothetical protein PANT_16d00044 [Pseudozyma antarctica T-34]
Length = 412
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 41/55 (74%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTAR 107
+DE+D+ E+FVRGSGPGGQA+ K + V LTH+PTG + C ++RS NR+ AR
Sbjct: 303 LDERDLAEKFVRGSGPGGQAINKLSTNVQLTHLPTGTRLTCQETRSRDRNRELAR 357
>gi|440801524|gb|ELR22542.1| peptidyltRNA hydrolase domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 327
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 42/59 (71%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELL 110
++ E +++E+F++G GPGGQ + KTN+CV L H+PTG+ +KC + R NR AR +L
Sbjct: 82 QVAESELEEKFIKGGGPGGQKINKTNSCVYLKHLPTGLEVKCQEQRERGRNRVIARRIL 140
>gi|343426408|emb|CBQ69938.1| conserved hypothetical protein [Sporisorium reilianum SRZ2]
Length = 415
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 46/69 (66%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
+DE+D+ E+F+RGSGPGGQA+ K + V LTH+PTG + C ++RS NR+ AR +
Sbjct: 301 LDERDLAEKFIRGSGPGGQAINKLSTNVQLTHLPTGTKVTCQETRSRDRNRELARRRMSL 360
Query: 113 QWDVQVNGE 121
+ V GE
Sbjct: 361 TLEKLVRGE 369
>gi|146421313|ref|XP_001486606.1| hypothetical protein PGUG_02277 [Meyerozyma guilliermondii ATCC
6260]
Length = 171
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 51/78 (65%), Gaps = 1/78 (1%)
Query: 53 IDEKDIQERFVRGS-GPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
I E++I+E F++G GPGGQ + K+N+ V LTHIPTG V+ C SRS +NRK ARE+L
Sbjct: 37 IVEEEIKEVFLKGGRGPGGQKINKSNSKVQLTHIPTGTVVTCQYSRSQEQNRKKAREILA 96
Query: 112 AQWDVQVNGEDSLNAQIR 129
+ + N + A +R
Sbjct: 97 LKLEELQNPQGCRTAVLR 114
>gi|190346160|gb|EDK38179.2| hypothetical protein PGUG_02277 [Meyerozyma guilliermondii ATCC
6260]
Length = 171
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 51/78 (65%), Gaps = 1/78 (1%)
Query: 53 IDEKDIQERFVRGS-GPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
I E++I+E F++G GPGGQ + K+N+ V LTHIPTG V+ C SRS +NRK ARE+L
Sbjct: 37 IVEEEIKEVFLKGGRGPGGQKINKSNSKVQLTHIPTGTVVTCQYSRSQEQNRKKAREILA 96
Query: 112 AQWDVQVNGEDSLNAQIR 129
+ + N + A +R
Sbjct: 97 LKLEELQNPQGCRTAVLR 114
>gi|197120075|ref|YP_002140502.1| peptidyl-tRNA hydrolase-like protein [Geobacter bemidjiensis Bem]
gi|197089435|gb|ACH40706.1| peptidyl-tRNA hydrolase-related protein [Geobacter bemidjiensis
Bem]
Length = 132
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/59 (54%), Positives = 43/59 (72%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
+ E+ I+ERFV SG GGQ V K+++CV L H+PTG+ +KC +SRS S NR AR LL+
Sbjct: 23 VSEQQIEERFVHASGRGGQHVNKSSSCVYLKHLPTGVEVKCMESRSQSLNRFLARRLLL 81
>gi|358374060|dbj|GAA90655.1| peptidyl-tRNA hydrolase domain protein [Aspergillus kawachii IFO
4308]
Length = 204
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 49/72 (68%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
KI + D+ +++G+GPGGQ + KTN+ V + H PTG+V+K +RS S+N K AR+LL
Sbjct: 45 KIQDADVTISYLKGTGPGGQKINKTNSAVQIIHKPTGVVVKSQATRSRSQNEKIARQLLA 104
Query: 112 AQWDVQVNGEDS 123
+ + +NG+ S
Sbjct: 105 DKVEELLNGDQS 116
>gi|261326766|emb|CBH09739.1| peptide chain release factor 1, putative [Trypanosoma brucei
gambiense DAL972]
Length = 459
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 42/61 (68%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
+ E+D FVRGSGPGGQ + ++N V LTH P+GI +KCHQSRS N++ A +++
Sbjct: 306 VHERDCNIEFVRGSGPGGQGMQSSSNAVCLTHKPSGISVKCHQSRSALGNKELALQMVAQ 365
Query: 113 Q 113
Q
Sbjct: 366 Q 366
>gi|340052569|emb|CCC46850.1| putative peptide chain release factor 1, fragment [Trypanosoma
vivax Y486]
Length = 334
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 41/61 (67%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
I E D FVRGSGPGGQ + ++N V LTH P+GI +KCHQSRS N++ A +++
Sbjct: 181 IHESDCAIEFVRGSGPGGQGMQSSSNAVCLTHKPSGISVKCHQSRSALGNKELALQMVAQ 240
Query: 113 Q 113
Q
Sbjct: 241 Q 241
>gi|288817909|ref|YP_003432256.1| peptide chain release factor RF-2 [Hydrogenobacter thermophilus
TK-6]
gi|384128671|ref|YP_005511284.1| peptide chain release factor 2 [Hydrogenobacter thermophilus TK-6]
gi|288787308|dbj|BAI69055.1| peptide chain release factor RF-2 [Hydrogenobacter thermophilus
TK-6]
gi|308751508|gb|ADO44991.1| peptide chain release factor 2 [Hydrogenobacter thermophilus TK-6]
Length = 369
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 57/103 (55%), Gaps = 17/103 (16%)
Query: 48 STIPKIDEK--------DIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSL 99
S +P+IDEK DIQ R SG GGQ V KT+ V + HIPTGI + C Q RS
Sbjct: 218 SVVPQIDEKINIEIREEDIQMETFRASGAGGQYVNKTDTAVRIRHIPTGITVSCQQERSQ 277
Query: 100 SENRKTARELLVAQWDVQVNGEDSLNAQIRRIDEKRRATQEQK 142
+NR A ELL A+ ++++++EK++A + +K
Sbjct: 278 FQNRLKALELLKAKL---------YQLELQKLEEKKKALEGEK 311
>gi|406988411|gb|EKE08419.1| hypothetical protein ACD_17C00173G0003 [uncultured bacterium]
Length = 130
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 46/71 (64%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
+ E D+ E+F+ G+G GGQ + KT+NCV L H+PTGI IKC ++RS NR AR L
Sbjct: 16 LQEGDLIEKFILGTGKGGQKINKTSNCVYLKHLPTGIEIKCQKTRSQKLNRLYARRALCE 75
Query: 113 QWDVQVNGEDS 123
+ ++ + E S
Sbjct: 76 EVEMGLLQEKS 86
>gi|338732935|ref|YP_004671408.1| putative peptide chain release factor 1 [Simkania negevensis Z]
gi|336482318|emb|CCB88917.1| putative peptide chain release factor 1 [Simkania negevensis Z]
Length = 138
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 45/76 (59%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
I E D+ E+F+ GSG GGQ V KT +CV L HIPT I +KC Q RS NR AR L
Sbjct: 20 IREDDLLEKFILGSGKGGQKVNKTASCVYLKHIPTHIEVKCQQDRSREMNRFLARRELCE 79
Query: 113 QWDVQVNGEDSLNAQI 128
Q +++ E + Q+
Sbjct: 80 QIASKIHQEKTAKKQL 95
>gi|163783151|ref|ZP_02178145.1| peptide chain release factor RF-2 [Hydrogenivirga sp. 128-5-R1-1]
gi|159881485|gb|EDP74995.1| peptide chain release factor RF-2 [Hydrogenivirga sp. 128-5-R1-1]
Length = 367
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/74 (48%), Positives = 46/74 (62%), Gaps = 8/74 (10%)
Query: 48 STIPKIDE--------KDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSL 99
S +P+IDE +D++ R SG GGQ V KT+ V LTHIPTGIV+ C Q RS
Sbjct: 217 SVMPQIDEDINIEVRDEDLKIETFRASGAGGQYVNKTDTAVRLTHIPTGIVVSCQQERSQ 276
Query: 100 SENRKTARELLVAQ 113
+NR+ A ELL A+
Sbjct: 277 FQNRRKALELLKAK 290
>gi|164655297|ref|XP_001728779.1| hypothetical protein MGL_4114 [Malassezia globosa CBS 7966]
gi|159102663|gb|EDP41565.1| hypothetical protein MGL_4114 [Malassezia globosa CBS 7966]
Length = 248
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 42/58 (72%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELL 110
+DE+DI+ERF+RGSGPGGQA+ K + V L HIPT I C +RS ++NR+ AR L
Sbjct: 130 LDERDIRERFIRGSGPGGQAINKLSTNVELVHIPTSTRITCQLTRSRAQNRELARRQL 187
>gi|295798158|emb|CAX69014.1| peptide chain release factor class A (=1), fragment [uncultured
bacterium]
Length = 170
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 57/105 (54%), Gaps = 5/105 (4%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
I E D++ERFVR GPGGQ + K + CV L H +GI IKC R+ S NR AR LLV+
Sbjct: 53 IREPDLEERFVRSRGPGGQNINKVSTCVYLKHRTSGIEIKCQSQRTQSANRIAARALLVS 112
Query: 113 QWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKLDALKKAWKERE 157
+ + + + R + E+ R T R + A KK + +E
Sbjct: 113 KIEQEAAALSQRQKKQRFLIERARRT-----RTISAKKKVRENKE 152
>gi|342180140|emb|CCC89616.1| putative peptide chain release factor 1 [Trypanosoma congolense
IL3000]
Length = 444
Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 41/61 (67%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
I E+D FVRGSGPGGQ + ++N V LTH P+GI +KCHQSRS N++ A + +
Sbjct: 291 IHEEDCNIEFVRGSGPGGQGMQSSSNAVCLTHRPSGISVKCHQSRSALGNKELALQTVAQ 350
Query: 113 Q 113
Q
Sbjct: 351 Q 351
>gi|397662732|ref|YP_006504270.1| Peptide chain release factor [Legionella pneumophila subsp.
pneumophila]
gi|395126143|emb|CCD04323.1| Peptide chain release factor [Legionella pneumophila subsp.
pneumophila]
Length = 136
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 50/87 (57%), Gaps = 7/87 (8%)
Query: 41 VSNIDIYSTIPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLS 100
+SN+ IY T D+ E+F+ GSG GGQ + KT + V L H+PTG+ +KC +SRS
Sbjct: 14 MSNLHIYET-------DLSEKFILGSGKGGQKLHKTASTVYLKHLPTGMEVKCQESRSRE 66
Query: 101 ENRKTARELLVAQWDVQVNGEDSLNAQ 127
+NR AR+ L + + E + Q
Sbjct: 67 DNRYFARQRLCEKLQAVFSDEKTKTQQ 93
>gi|68067771|ref|XP_675820.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|68077037|ref|XP_680438.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56495222|emb|CAI02598.1| conserved hypothetical protein [Plasmodium berghei]
gi|56501376|emb|CAI04754.1| hypothetical protein PB001267.02.0 [Plasmodium berghei]
Length = 147
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/105 (43%), Positives = 65/105 (61%), Gaps = 13/105 (12%)
Query: 56 KDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTG---IVIKCHQSRSLSENRKTARELLVA 112
K+I+E F++G+G GGQ V KTNNCV++ + T IVIKCH+ R L +NR ARELL
Sbjct: 28 KNIEETFIKGTGKGGQKVNKTNNCVMIKYDRTNDDKIVIKCHKYRCLQQNRVYARELLYD 87
Query: 113 QWDVQVNG---EDSLNAQIRRIDEKR---RATQEQKKRKLDALKK 151
+ +N ED +N QI + EKR + T+ +K R ++ KK
Sbjct: 88 KI-TSINNKAKEDIIN-QIEK--EKRQILKLTESEKNRSINYKKK 128
>gi|297263790|ref|XP_001097466.2| PREDICTED: uncharacterized protein C12orf65-like isoform 1 [Macaca
mulatta]
gi|297263792|ref|XP_002798863.1| PREDICTED: uncharacterized protein C12orf65-like isoform 2 [Macaca
mulatta]
Length = 122
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 29/53 (54%), Positives = 39/53 (73%)
Query: 47 YSTIPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSL 99
Y + +DE +++E+FV+G GPGGQA KT+NCVVL HIP+GIV+K R L
Sbjct: 52 YPALLSLDENELEEQFVKGHGPGGQATNKTSNCVVLKHIPSGIVVKVDNRRPL 104
>gi|444915267|ref|ZP_21235402.1| Peptide chain release factor 2 [Cystobacter fuscus DSM 2262]
gi|444713682|gb|ELW54577.1| Peptide chain release factor 2 [Cystobacter fuscus DSM 2262]
Length = 319
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 70/133 (52%), Gaps = 19/133 (14%)
Query: 21 LESQVTITRELRNDGYHRNL-----VSNIDIYSTIPK-----IDEKDIQERFVRGSGPGG 70
L+++V + R +R + N +++D+Y + I EKDI+ +F+RG G GG
Sbjct: 137 LKAEVGVHRLVRISPFDANARRQTAFASVDVYPEVDDSIQIDIPEKDIELKFIRGGGAGG 196
Query: 71 QAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVAQWDVQVNGEDSLNAQIRR 130
Q V KT++ L H+PTGI+I C RS S N+ A ++L + +++R
Sbjct: 197 QKVNKTSSTAQLRHLPTGIIITCQTERSQSANKDMAFKILRGRL---------YELEMKR 247
Query: 131 IDEKRRATQEQKK 143
+ +R A + QKK
Sbjct: 248 REAERDAAEAQKK 260
>gi|294658124|ref|XP_460455.2| DEHA2F02090p [Debaryomyces hansenii CBS767]
gi|202952893|emb|CAG88762.2| DEHA2F02090p [Debaryomyces hansenii CBS767]
Length = 180
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 55/101 (54%), Gaps = 12/101 (11%)
Query: 38 RNLVSNIDIYSTIPK-----------IDEKDIQERFVRGS-GPGGQAVAKTNNCVVLTHI 85
R VS + IPK I E++I E F++G GPGGQ + K+N+ V LTH
Sbjct: 12 RCFVSTSYVNYAIPKKNKMPPRPKWLIVEEEIDEAFLKGGRGPGGQKINKSNSKVQLTHK 71
Query: 86 PTGIVIKCHQSRSLSENRKTARELLVAQWDVQVNGEDSLNA 126
PTG+V+ C SRS +NRK ARE+L + D N E A
Sbjct: 72 PTGLVVTCQYSRSQEQNRKRAREILALKLDELQNPEGCRTA 112
>gi|18089197|gb|AAH20885.1| C12orf65 protein [Homo sapiens]
gi|119618801|gb|EAW98395.1| hypothetical protein FLJ38663, isoform CRA_a [Homo sapiens]
Length = 119
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 29/53 (54%), Positives = 39/53 (73%)
Query: 47 YSTIPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSL 99
Y + +DE +++E+FV+G GPGGQA KT+NCVVL HIP+GIV+K R L
Sbjct: 49 YPALLSLDENELEEQFVKGHGPGGQATNKTSNCVVLKHIPSGIVVKVDHRRPL 101
>gi|451846562|gb|EMD59871.1| hypothetical protein COCSADRAFT_40352 [Cochliobolus sativus ND90Pr]
Length = 183
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 46/69 (66%)
Query: 55 EKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVAQW 114
E D+ E F++GSGPGGQ + KT++ V L HIPTGIV+K +RS NRK AR +L +
Sbjct: 45 ESDLIENFLKGSGPGGQKINKTSSAVQLKHIPTGIVVKYQDTRSREINRKMARRILQDRI 104
Query: 115 DVQVNGEDS 123
+ GED+
Sbjct: 105 EEMELGEDA 113
>gi|350636142|gb|EHA24502.1| hypothetical protein ASPNIDRAFT_137541 [Aspergillus niger ATCC
1015]
Length = 139
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 49/72 (68%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
KI + D+ +++G+GPGGQ + KTN+ V + H PTG+V+K +RS S+N K AR+LL
Sbjct: 27 KIQDADVTVSYLKGTGPGGQKINKTNSAVQIIHKPTGVVVKSQATRSRSQNEKIARQLLA 86
Query: 112 AQWDVQVNGEDS 123
+ + ++G+ S
Sbjct: 87 DKVEELLHGDQS 98
>gi|145250303|ref|XP_001396665.1| peptidyl-tRNA hydrolase domain protein [Aspergillus niger CBS
513.88]
gi|134082184|emb|CAL00939.1| unnamed protein product [Aspergillus niger]
Length = 198
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 50/75 (66%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
KI + D+ +++G+GPGGQ + KTN+ V + H PTG+V+K +RS S+N K AR+LL
Sbjct: 44 KIQDADVTVSYLKGTGPGGQKINKTNSAVQIIHKPTGVVVKSQATRSRSQNEKIARQLLA 103
Query: 112 AQWDVQVNGEDSLNA 126
+ + ++G+ S A
Sbjct: 104 DKVEELLHGDQSRAA 118
>gi|373852836|ref|ZP_09595636.1| Class I peptide chain release factor [Opitutaceae bacterium TAV5]
gi|391229432|ref|ZP_10265638.1| protein chain release factor B [Opitutaceae bacterium TAV1]
gi|372475065|gb|EHP35075.1| Class I peptide chain release factor [Opitutaceae bacterium TAV5]
gi|391219093|gb|EIP97513.1| protein chain release factor B [Opitutaceae bacterium TAV1]
Length = 136
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 42/63 (66%), Gaps = 4/63 (6%)
Query: 44 IDIYSTIPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENR 103
+D +P D++ERFVRGSGPGGQ + KT++ V L H PTG+ ++C + RS + NR
Sbjct: 13 LDALGVLPG----DVEERFVRGSGPGGQKINKTSSTVCLRHAPTGVEVRCQRERSQAANR 68
Query: 104 KTA 106
+ A
Sbjct: 69 EAA 71
>gi|383454655|ref|YP_005368644.1| peptide chain release factor 2 [Corallococcus coralloides DSM 2259]
gi|380733978|gb|AFE09980.1| peptide chain release factor 2 [Corallococcus coralloides DSM 2259]
Length = 319
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 59/103 (57%), Gaps = 16/103 (15%)
Query: 21 LESQVTITRELRNDGYHRNL-----VSNIDIYSTIPKID--------EKDIQERFVRGSG 67
L+++V + R +R + N +++D+Y P++D EKDI+ +F+RG G
Sbjct: 136 LKAEVGVHRLVRISPFDANARRQTAFASVDVY---PEVDDSIQIDLPEKDIELKFIRGGG 192
Query: 68 PGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELL 110
GGQ V KT++ L H+PTGI+I C RS S N+ A ++L
Sbjct: 193 AGGQKVNKTSSTAQLRHLPTGIIITCQTERSQSANKDMAFKIL 235
>gi|392901267|ref|NP_001255660.1| Protein T23B5.4, isoform b [Caenorhabditis elegans]
gi|313004792|emb|CBY25203.1| Protein T23B5.4, isoform b [Caenorhabditis elegans]
Length = 149
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 60/105 (57%), Gaps = 6/105 (5%)
Query: 57 DIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVAQWDV 116
+ ++++ G GPGGQ V N V LTH+PTG V+K H+SR L +N A E + D
Sbjct: 47 NFFQKYISGWGPGGQKVNTAQNAVQLTHLPTGTVLKVHESRLLPKNIDIAFERMKFVLDR 106
Query: 117 QVNGEDSLNAQIRRIDEKRRATQEQKKRKLDALKKAWKEREDRRN 161
Q+NGE+ Q++R+ + +E+K K +A KE+E +N
Sbjct: 107 QINGENCYEEQLKRL----QIAKEEKSNKRRV--QARKEKESYKN 145
>gi|54296203|ref|YP_122572.1| hypothetical protein lpp0229 [Legionella pneumophila str. Paris]
gi|397665850|ref|YP_006507387.1| Peptide chain release factor [Legionella pneumophila subsp.
pneumophila]
gi|53749988|emb|CAH11376.1| hypothetical protein lpp0229 [Legionella pneumophila str. Paris]
gi|395129261|emb|CCD07491.1| Peptide chain release factor [Legionella pneumophila subsp.
pneumophila]
Length = 136
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 50/87 (57%), Gaps = 7/87 (8%)
Query: 41 VSNIDIYSTIPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLS 100
++N+ IY T D+ E+F+ GSG GGQ + KT + V L H+PTG+ +KC +SRS
Sbjct: 14 MTNLHIYET-------DLSEKFILGSGKGGQKLHKTASTVYLKHLPTGMEVKCQESRSRE 66
Query: 101 ENRKTARELLVAQWDVQVNGEDSLNAQ 127
+NR AR+ L + + E + Q
Sbjct: 67 DNRYFARQRLCEKLQAVFSDEKTKTQQ 93
>gi|52840422|ref|YP_094221.1| peptide chain release factor [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
gi|378776125|ref|YP_005184555.1| peptide chain release factor [Legionella pneumophila subsp.
pneumophila ATCC 43290]
gi|52627533|gb|AAU26274.1| peptide chain release factor [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
gi|364506932|gb|AEW50456.1| peptide chain release factor [Legionella pneumophila subsp.
pneumophila ATCC 43290]
Length = 136
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 50/87 (57%), Gaps = 7/87 (8%)
Query: 41 VSNIDIYSTIPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLS 100
++N+ IY T D+ E+F+ GSG GGQ + KT + V L H+PTG+ +KC +SRS
Sbjct: 14 MTNLHIYET-------DLSEKFILGSGKGGQKLHKTASTVYLKHLPTGMEVKCQESRSRE 66
Query: 101 ENRKTARELLVAQWDVQVNGEDSLNAQ 127
+NR AR+ L + + E + Q
Sbjct: 67 DNRYFARQRLCEKLQAVFSDEKTKTQQ 93
>gi|148358384|ref|YP_001249591.1| peptide chain release factor [Legionella pneumophila str. Corby]
gi|296105734|ref|YP_003617434.1| peptide chain release factor [Legionella pneumophila 2300/99 Alcoy]
gi|148280157|gb|ABQ54245.1| peptide chain release factor [Legionella pneumophila str. Corby]
gi|295647635|gb|ADG23482.1| peptide chain release factor [Legionella pneumophila 2300/99 Alcoy]
Length = 136
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 50/87 (57%), Gaps = 7/87 (8%)
Query: 41 VSNIDIYSTIPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLS 100
++N+ IY T D+ E+F+ GSG GGQ + KT + V L H+PTG+ +KC +SRS
Sbjct: 14 MTNLHIYET-------DLSEKFILGSGKGGQKLHKTASTVYLKHLPTGMEVKCQESRSRE 66
Query: 101 ENRKTARELLVAQWDVQVNGEDSLNAQ 127
+NR AR+ L + + E + Q
Sbjct: 67 DNRYFARQRLCEKLQAVFSDEKTKTQQ 93
>gi|433602857|ref|YP_007035226.1| Peptide chain release factor 2 [Saccharothrix espanaensis DSM
44229]
gi|407880710|emb|CCH28353.1| Peptide chain release factor 2 [Saccharothrix espanaensis DSM
44229]
Length = 365
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/61 (52%), Positives = 41/61 (67%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
IDEKD++ R SGPGGQ V T++ V LTHIPTGIV+ C RS +N+ TA +L A
Sbjct: 232 IDEKDLRVDVYRSSGPGGQGVNTTDSAVRLTHIPTGIVVSCQNERSQLQNKATAMAVLQA 291
Query: 113 Q 113
+
Sbjct: 292 K 292
>gi|82539988|ref|XP_724342.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23478956|gb|EAA15907.1| hypothetical protein [Plasmodium yoelii yoelii]
Length = 172
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/61 (54%), Positives = 43/61 (70%), Gaps = 3/61 (4%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTG---IVIKCHQSRSLSENRKTAREL 109
I K+I+E F++G+G GGQ V KTNNCV++ + T IVIKCH+ R L +NR AREL
Sbjct: 72 ICPKNIEETFIKGTGKGGQKVNKTNNCVMIKYDRTNDDKIVIKCHKYRCLQQNRVYAREL 131
Query: 110 L 110
L
Sbjct: 132 L 132
>gi|405374674|ref|ZP_11029053.1| Peptide chain release factor 2 protein [Chondromyces apiculatus DSM
436]
gi|397086839|gb|EJJ17928.1| Peptide chain release factor 2 protein [Myxococcus sp. (contaminant
ex DSM 436)]
Length = 359
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 59/103 (57%), Gaps = 16/103 (15%)
Query: 21 LESQVTITRELRNDGYHRNL-----VSNIDIYSTIPKID--------EKDIQERFVRGSG 67
L+++V + R +R + N +++D+Y P++D EKDI+ +F+RG G
Sbjct: 176 LKAEVGVHRLVRISPFDANARRQTAFASVDVY---PEVDDSIQIDLPEKDIELKFIRGGG 232
Query: 68 PGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELL 110
GGQ V KT++ L H+PTGI+I C RS S N+ A ++L
Sbjct: 233 AGGQKVNKTSSTAQLRHLPTGIIITCQTERSQSANKDMAFKIL 275
>gi|343473565|emb|CCD14577.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 474
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 41/61 (67%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
I E+D FVRGSGPGGQ + ++N V LTH P+GI +KCHQSRS N++ + + +
Sbjct: 291 IHEEDCNIEFVRGSGPGGQGMQSSSNAVCLTHRPSGISVKCHQSRSALGNKELSLQTVAQ 350
Query: 113 Q 113
Q
Sbjct: 351 Q 351
>gi|442805591|ref|YP_007373740.1| peptide chain release factor 2 [Clostridium stercorarium subsp.
stercorarium DSM 8532]
gi|442741441|gb|AGC69130.1| peptide chain release factor 2 [Clostridium stercorarium subsp.
stercorarium DSM 8532]
Length = 339
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/61 (52%), Positives = 42/61 (68%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
ID +DI+ R SG GGQ V KT++ V LTHIPTGIV+ C RS +NR+TA ++L A
Sbjct: 205 IDPEDIKMDVFRASGAGGQHVNKTSSAVRLTHIPTGIVVTCQNERSQHQNRETAMKMLYA 264
Query: 113 Q 113
+
Sbjct: 265 K 265
>gi|338535949|ref|YP_004669283.1| peptide chain release factor 2 [Myxococcus fulvus HW-1]
gi|337262045|gb|AEI68205.1| peptide chain release factor 2 [Myxococcus fulvus HW-1]
Length = 302
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 57/100 (57%), Gaps = 10/100 (10%)
Query: 21 LESQVTITRELRNDGYHRNL-----VSNIDIYSTIPK-----IDEKDIQERFVRGSGPGG 70
L+++V + R +R + N +++D+Y + I EKDI+ +F+RG G GG
Sbjct: 119 LKAEVGVHRLVRISPFDANARRQTAFASVDVYPEVDDTIQIDIPEKDIELKFIRGGGAGG 178
Query: 71 QAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELL 110
Q V KT++ L H+PTGI+I C RS S N+ A ++L
Sbjct: 179 QKVNKTSSTAQLRHLPTGIIITCQTERSQSANKDMAFKIL 218
>gi|169597527|ref|XP_001792187.1| hypothetical protein SNOG_01549 [Phaeosphaeria nodorum SN15]
gi|160707538|gb|EAT91198.2| hypothetical protein SNOG_01549 [Phaeosphaeria nodorum SN15]
Length = 236
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 49/71 (69%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
+ + DI E+F+ GSGPGGQ + KT++ V L HIPTGIV+K +RS + NRK AR++L
Sbjct: 41 LPDSDIIEKFLHGSGPGGQKINKTSSAVQLKHIPTGIVVKYQDTRSRTVNRKMARKILQE 100
Query: 113 QWDVQVNGEDS 123
+ + G+D+
Sbjct: 101 RIEEAELGDDA 111
>gi|121703728|ref|XP_001270128.1| peptidyl-tRNA hydrolase domain protein [Aspergillus clavatus NRRL
1]
gi|119398272|gb|EAW08702.1| peptidyl-tRNA hydrolase domain protein [Aspergillus clavatus NRRL
1]
Length = 203
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 50/75 (66%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
KI++ D+ +++G+GPGGQ + KTN+ V L H PTG+V+K +RS S+N K AR++L
Sbjct: 45 KINDADLTISYLKGTGPGGQKINKTNSAVQLIHKPTGLVVKSQATRSRSQNEKIARQILA 104
Query: 112 AQWDVQVNGEDSLNA 126
+ + G++S A
Sbjct: 105 DKVEELQKGDESRRA 119
>gi|156837376|ref|XP_001642715.1| hypothetical protein Kpol_345p5 [Vanderwaltozyma polyspora DSM
70294]
gi|156113276|gb|EDO14857.1| hypothetical protein Kpol_345p5 [Vanderwaltozyma polyspora DSM
70294]
Length = 162
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 58/99 (58%), Gaps = 17/99 (17%)
Query: 51 PKIDEK---DIQERFVRGS-GPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTA 106
PK +E+ + E F+ G GPGGQ + K+N+ V L HIPTGIV++C ++RS +NRK A
Sbjct: 26 PKFNEQLETECTESFMHGGRGPGGQKINKSNSKVQLKHIPTGIVVECQETRSRDQNRKIA 85
Query: 107 RELLVAQWD-----VQVNGEDSLNAQIRRIDEKRRATQE 140
RE + + ++VNGE I E+ +A QE
Sbjct: 86 REKMALAIERFRNGIEVNGEV--------ISEREKAVQE 116
>gi|85860191|ref|YP_462393.1| peptide chain release factor [Syntrophus aciditrophicus SB]
gi|85723282|gb|ABC78225.1| peptide chain release factor [Syntrophus aciditrophicus SB]
Length = 136
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 35/50 (70%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSEN 102
I E D++E F+R SGPGGQ V KT CV L H+PTG+ +KC Q RS + N
Sbjct: 20 ISEDDLRETFIRSSGPGGQNVNKTATCVYLVHLPTGLSVKCQQDRSQTVN 69
>gi|344302814|gb|EGW33088.1| hypothetical protein SPAPADRAFT_60397 [Spathaspora passalidarum
NRRL Y-27907]
Length = 185
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 61/101 (60%), Gaps = 12/101 (11%)
Query: 41 VSNIDIYSTIPK-----------IDEKDIQERFVRG-SGPGGQAVAKTNNCVVLTHIPTG 88
+++ + STIPK + E +I+E F++G +G GGQ + KTN+ V LTH+PTG
Sbjct: 31 LTSTAVVSTIPKKNKMPPRPLWLVKEDEIKEVFIKGGTGAGGQKINKTNSKVQLTHLPTG 90
Query: 89 IVIKCHQSRSLSENRKTARELLVAQWDVQVNGEDSLNAQIR 129
IV+ C SRS +NRK ARELL + + N E NA ++
Sbjct: 91 IVVTCQYSRSQEQNRKRARELLALKLEELENPESCRNAVLK 131
>gi|255718823|ref|XP_002555692.1| KLTH0G15158p [Lachancea thermotolerans]
gi|238937076|emb|CAR25255.1| KLTH0G15158p [Lachancea thermotolerans CBS 6340]
Length = 155
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 49/71 (69%), Gaps = 7/71 (9%)
Query: 51 PKID---EKDIQERFVRGS-GPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTA 106
PK+ E +++E+F+ G GPGGQ + K N+ V L H+P+GIV++C ++RS +NRK A
Sbjct: 26 PKLSTQMETELEEKFLHGGRGPGGQKINKCNSKVQLKHLPSGIVVECQETRSRDQNRKLA 85
Query: 107 RELL---VAQW 114
RE L +AQW
Sbjct: 86 REKLALRIAQW 96
>gi|442322136|ref|YP_007362157.1| peptide chain release factor 2 [Myxococcus stipitatus DSM 14675]
gi|441489778|gb|AGC46473.1| peptide chain release factor 2 [Myxococcus stipitatus DSM 14675]
Length = 373
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 56/100 (56%), Gaps = 10/100 (10%)
Query: 21 LESQVTITRELRNDGYHRNL-----VSNIDIYSTIPK-----IDEKDIQERFVRGSGPGG 70
L+++V + R +R + N +++D+Y + I EKDI +F+RG G GG
Sbjct: 190 LKAEVGVHRLVRISPFDANARRQTAFASVDVYPEVDDTIQIDIPEKDIDLKFIRGGGAGG 249
Query: 71 QAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELL 110
Q V KT++ L H+PTGI+I C RS S N+ A ++L
Sbjct: 250 QKVNKTSSTAQLRHLPTGIIITCQTERSQSANKDMAFKIL 289
>gi|453049954|gb|EME97515.1| peptide chain release factor 2 [Streptomyces mobaraensis NBRC 13819
= DSM 40847]
Length = 368
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 56/99 (56%), Gaps = 20/99 (20%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
+IDE D++ R SGPGGQ V T++ V LTHIPTGIV+ C RS +N+ TA +L
Sbjct: 232 EIDESDLRVDVYRSSGPGGQGVNTTDSAVRLTHIPTGIVVSCQNERSQIQNKATAMNVLQ 291
Query: 112 AQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKLDALK 150
A ++ E+RR ++++ K+DALK
Sbjct: 292 A-----------------KLLERRR---QEEQAKMDALK 310
>gi|108759158|ref|YP_632896.1| peptide chain release factor 2 [Myxococcus xanthus DK 1622]
gi|108463038|gb|ABF88223.1| peptide chain release factor 2 [Myxococcus xanthus DK 1622]
Length = 373
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 56/100 (56%), Gaps = 10/100 (10%)
Query: 21 LESQVTITRELRNDGYHRNL-----VSNIDIYSTIPK-----IDEKDIQERFVRGSGPGG 70
L+++V + R +R + N +++D+Y + I EKDI +F+RG G GG
Sbjct: 190 LKAEVGVHRLVRISPFDANARRQTAFASVDVYPEVDDTIQIDIPEKDIDLKFIRGGGAGG 249
Query: 71 QAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELL 110
Q V KT++ L H+PTGI+I C RS S N+ A ++L
Sbjct: 250 QKVNKTSSTAQLRHLPTGIIITCQTERSQSANKDMAFKIL 289
>gi|330941932|ref|XP_003306099.1| hypothetical protein PTT_19132 [Pyrenophora teres f. teres 0-1]
gi|311316572|gb|EFQ85807.1| hypothetical protein PTT_19132 [Pyrenophora teres f. teres 0-1]
Length = 205
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 47/71 (66%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
+ + D+ E F++GSGPGGQ + KT++ V L HIPTGIV+K +RS NRK AR +L
Sbjct: 25 LPDSDLIENFLKGSGPGGQKINKTSSAVQLKHIPTGIVVKYQDTRSREINRKMARRILQD 84
Query: 113 QWDVQVNGEDS 123
+ + GED+
Sbjct: 85 RIEELQLGEDA 95
>gi|291439311|ref|ZP_06578701.1| peptide chain release factor 2 [Streptomyces ghanaensis ATCC 14672]
gi|291342206|gb|EFE69162.1| peptide chain release factor 2 [Streptomyces ghanaensis ATCC 14672]
Length = 368
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 55/98 (56%), Gaps = 20/98 (20%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
IDE D++ R SGPGGQ V T++ V +THIPTGIV+ C RS +NR TA +L A
Sbjct: 233 IDESDLRVDVYRSSGPGGQGVNTTDSAVRITHIPTGIVVSCQNERSQIQNRATAMNVLQA 292
Query: 113 QWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKLDALK 150
++ E+RR ++++ K+DALK
Sbjct: 293 -----------------KLLERRR---QEEQAKMDALK 310
>gi|331695045|ref|YP_004331284.1| peptide chain release factor 2 [Pseudonocardia dioxanivorans
CB1190]
gi|326949734|gb|AEA23431.1| Peptide chain release factor 2 [Pseudonocardia dioxanivorans
CB1190]
Length = 369
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/61 (52%), Positives = 41/61 (67%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
IDEKD++ R SGPGGQ V T++ V LTHIPTGIV+ C RS +N+ TA +L A
Sbjct: 232 IDEKDLRVDVYRSSGPGGQGVNTTDSAVRLTHIPTGIVVSCQNERSQIQNKATAMVVLQA 291
Query: 113 Q 113
+
Sbjct: 292 K 292
>gi|50287521|ref|XP_446190.1| hypothetical protein [Candida glabrata CBS 138]
gi|49525497|emb|CAG59114.1| unnamed protein product [Candida glabrata]
Length = 187
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 62/100 (62%), Gaps = 5/100 (5%)
Query: 51 PKID---EKDIQERFVRG-SGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTA 106
PK D E DI+E+F+ G +GPGGQ + K N+ V + H+P+ IV+ C +RS +NRK A
Sbjct: 41 PKFDASMEADIEEKFLHGGTGPGGQKINKCNSKVQIKHVPSNIVVTCQATRSRDQNRKIA 100
Query: 107 RELLVAQWDV-QVNGEDSLNAQIRRIDEKRRATQEQKKRK 145
RE L + + Q+ E N+ ++ + E+ +A E K+++
Sbjct: 101 REKLALELERWQLGQEKDGNSGVQVMTEREQALLEWKRQQ 140
>gi|170289255|ref|YP_001739493.1| peptide chain release factor 1 [Thermotoga sp. RQ2]
gi|281412857|ref|YP_003346936.1| peptide chain release factor 1 [Thermotoga naphthophila RKU-10]
gi|170176758|gb|ACB09810.1| peptide chain release factor 1 [Thermotoga sp. RQ2]
gi|281373960|gb|ADA67522.1| peptide chain release factor 1 [Thermotoga naphthophila RKU-10]
Length = 342
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 64/117 (54%), Gaps = 7/117 (5%)
Query: 3 IKIVMWPMRDRNLAGIRLLESQVTITRELRNDGYHRNLVSNIDIYSTIPKIDEKDIQER- 61
I+ V++ ++ +N GI ES V + + + ++ + +P+I+EKDI+ R
Sbjct: 136 IREVVFFVKGKNAYGILKYESGVHRVQRIPVTESGGRIHTSTATVAVLPEIEEKDIEIRP 195
Query: 62 ------FVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
R SG GGQ V KT + V +THIPTGIV+ C RS +NR+TA +L A
Sbjct: 196 EDLKIETFRASGHGGQYVNKTESAVRITHIPTGIVVSCQNERSQYQNRQTALRILRA 252
>gi|256375089|ref|YP_003098749.1| peptide chain release factor 2 [Actinosynnema mirum DSM 43827]
gi|255919392|gb|ACU34903.1| peptide chain release factor 2 [Actinosynnema mirum DSM 43827]
Length = 367
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 42/62 (67%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
+IDEK+++ R SGPGGQ V T++ V LTHIPTGIV+ C RS +N+ TA +L
Sbjct: 231 EIDEKELRVDVYRSSGPGGQGVNTTDSAVRLTHIPTGIVVSCQNERSQLQNKATAMAVLQ 290
Query: 112 AQ 113
A+
Sbjct: 291 AK 292
>gi|444320065|ref|XP_004180689.1| hypothetical protein TBLA_0E01100 [Tetrapisispora blattae CBS 6284]
gi|387513732|emb|CCH61170.1| hypothetical protein TBLA_0E01100 [Tetrapisispora blattae CBS 6284]
Length = 171
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 45/69 (65%), Gaps = 4/69 (5%)
Query: 47 YSTIPKI---DEKDIQERFVRGS-GPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSEN 102
+ PK+ DE DI+E F+ G GPGGQ + KTN+ V L H+P+G++I C ++RS + N
Sbjct: 32 FPPRPKLGADDENDIEETFLHGGRGPGGQKINKTNSKVQLKHLPSGVIITCQETRSRARN 91
Query: 103 RKTARELLV 111
R ARE L
Sbjct: 92 RDIAREKLA 100
>gi|189196084|ref|XP_001934380.1| peptidyl-tRNA hydrolase domain containing protein [Pyrenophora
tritici-repentis Pt-1C-BFP]
gi|187980259|gb|EDU46885.1| peptidyl-tRNA hydrolase domain containing protein [Pyrenophora
tritici-repentis Pt-1C-BFP]
Length = 175
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 51/78 (65%), Gaps = 4/78 (5%)
Query: 37 HRNLVSNIDIYS-TIPK---IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIK 92
HR L ++ + S ++P + + D+ E F++GSGPGGQ + KT++ V L HIPTGIV+K
Sbjct: 10 HRPLHTSHPLLSKSLPPRVPLPDSDLIENFLKGSGPGGQKINKTSSAVQLKHIPTGIVVK 69
Query: 93 CHQSRSLSENRKTARELL 110
+RS NRK AR +L
Sbjct: 70 YQDTRSREINRKMARRIL 87
>gi|398785517|ref|ZP_10548476.1| peptide chain release factor 2 [Streptomyces auratus AGR0001]
gi|396994386|gb|EJJ05426.1| peptide chain release factor 2 [Streptomyces auratus AGR0001]
Length = 368
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 64/123 (52%), Gaps = 25/123 (20%)
Query: 33 NDGYHRNLVSNIDIYSTIPK-----IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 87
N G + + +++ + K IDE +++ R SGPGGQ V T++ V LTHIPT
Sbjct: 208 NQGRRQTSFAGVEVLPVVEKTDHIEIDESELRVDVYRSSGPGGQGVNTTDSAVRLTHIPT 267
Query: 88 GIVIKCHQSRSLSENRKTARELLVAQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKLD 147
GIV+ C RS +N+ TA +L A ++ E+RR ++++ K+D
Sbjct: 268 GIVVSCQNERSQIQNKATAMNVLQA-----------------KLLERRR---QEEQAKMD 307
Query: 148 ALK 150
ALK
Sbjct: 308 ALK 310
>gi|383643884|ref|ZP_09956290.1| peptide chain release factor 2 [Streptomyces chartreusis NRRL
12338]
Length = 368
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 62/123 (50%), Gaps = 25/123 (20%)
Query: 33 NDGYHRNLVSNIDIYSTIPKIDEKDIQER-----FVRGSGPGGQAVAKTNNCVVLTHIPT 87
N G + + ++I + + D DI E R SGPGGQ V T++ V +THIPT
Sbjct: 208 NQGRRQTSFAGVEILPVVEQSDHVDIDESELRVDVYRSSGPGGQGVNTTDSAVRITHIPT 267
Query: 88 GIVIKCHQSRSLSENRKTARELLVAQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKLD 147
GIV+ C RS +NR TA +L A ++ E+RR ++++ K+D
Sbjct: 268 GIVVSCQNERSQIQNRATAMNVLQA-----------------KLLERRR---QEEQAKMD 307
Query: 148 ALK 150
ALK
Sbjct: 308 ALK 310
>gi|324997823|ref|ZP_08118935.1| peptide chain release factor 2 [Pseudonocardia sp. P1]
Length = 368
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 42/62 (67%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
+IDEKD++ R SGPGGQ V T++ V LTHIPTGIV+ C RS +N+ +A +L
Sbjct: 231 EIDEKDLRVDVFRASGPGGQGVNTTDSAVRLTHIPTGIVVACQNERSQLQNKASAMVVLQ 290
Query: 112 AQ 113
A+
Sbjct: 291 AK 292
>gi|388457040|ref|ZP_10139335.1| hypothetical protein FdumT_10727 [Fluoribacter dumoffii Tex-KL]
Length = 134
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 46/76 (60%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
++ E D+ E+F+ GSG GGQ + KT + V L HIP+G+ IKC +SRS +NR AR L
Sbjct: 18 QVHETDLIEKFIIGSGKGGQKLHKTASTVYLKHIPSGLEIKCQESRSREDNRYFARIRLC 77
Query: 112 AQWDVQVNGEDSLNAQ 127
+ QV E + Q
Sbjct: 78 EKLHSQVTDEKTKEQQ 93
>gi|328768224|gb|EGF78271.1| hypothetical protein BATDEDRAFT_90766 [Batrachochytrium
dendrobatidis JAM81]
Length = 177
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 64/105 (60%), Gaps = 1/105 (0%)
Query: 55 EKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVAQW 114
E D+ E+F +GSGPGGQ + K + V L H PTG+ ++ + R L+ NR+ AR+LL+ +
Sbjct: 68 ETDLVEKFTKGSGPGGQKINKCKHSVQLWHTPTGLFVETQRFRELASNRREARKLLLLKL 127
Query: 115 DVQVNGEDSLNAQIRRIDEKRRATQEQK-KRKLDALKKAWKERED 158
D Q+NG+ S A +R A Q+Q+ K+K L + +++ D
Sbjct: 128 DQQINGDVSKLAVKLDKHHRRVAKQKQRSKKKYGGLNGSPRDKTD 172
>gi|189485401|ref|YP_001956342.1| peptidyl-tRNA hydrolase-like protein [uncultured Termite group 1
bacterium phylotype Rs-D17]
gi|170287360|dbj|BAG13881.1| peptidyl-tRNA hydrolase-like protein [uncultured Termite group 1
bacterium phylotype Rs-D17]
Length = 136
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 49/88 (55%), Gaps = 9/88 (10%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
K+ E DI+E+F+R SG GGQ V K + V L H PTGI +KC + R NR AR LL
Sbjct: 22 KVQESDIEEKFIRSSGKGGQNVNKVSTTVYLKHYPTGIEVKCRRERIQGLNRFFARRLLA 81
Query: 112 AQWDVQVNGEDSLNAQIRRIDEKRRATQ 139
+ + +V G RI EKR+ +
Sbjct: 82 EKIEEKVLG---------RISEKRQKIE 100
>gi|33859720|ref|NP_082586.1| probable peptide chain release factor C12orf65 homolog,
mitochondrial isoform b [Mus musculus]
gi|26333153|dbj|BAC30294.1| unnamed protein product [Mus musculus]
gi|148687648|gb|EDL19595.1| RIKEN cDNA 2810006K23, isoform CRA_a [Mus musculus]
Length = 128
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 47/80 (58%), Gaps = 4/80 (5%)
Query: 47 YSTIPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTA 106
Y + ++E +++E+FV+G GPGGQA KT+NCVVL H+P+GIV+K E R A
Sbjct: 52 YPALLPLNESELEEQFVKGHGPGGQATNKTSNCVVLKHVPSGIVVKVETG---GEPRSAA 108
Query: 107 RELLVAQWDVQVNGEDSLNA 126
+QW D+ N+
Sbjct: 109 TAGF-SQWACPFWHGDTANS 127
>gi|408531516|emb|CCK29690.1| Peptide chain release factor 2 [Streptomyces davawensis JCM 4913]
Length = 352
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 62/123 (50%), Gaps = 25/123 (20%)
Query: 33 NDGYHRNLVSNIDIYSTIPKIDEKDIQER-----FVRGSGPGGQAVAKTNNCVVLTHIPT 87
N G + + +++ + + D DI E R SGPGGQ V T++ V LTHIPT
Sbjct: 192 NQGRRQTSFAGVEVLPVVEQTDHIDIDESELRVDVYRSSGPGGQGVNTTDSAVRLTHIPT 251
Query: 88 GIVIKCHQSRSLSENRKTARELLVAQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKLD 147
GIV+ C RS +N+ TA +L A ++ E+RR ++++ K+D
Sbjct: 252 GIVVSCQNERSQIQNKATAMNVLQA-----------------KLLERRR---QEEQAKMD 291
Query: 148 ALK 150
ALK
Sbjct: 292 ALK 294
>gi|302544934|ref|ZP_07297276.1| peptide chain release factor 2 [Streptomyces hygroscopicus ATCC
53653]
gi|302462552|gb|EFL25645.1| peptide chain release factor 2 [Streptomyces himastatinicus ATCC
53653]
Length = 370
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 55/99 (55%), Gaps = 20/99 (20%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
+IDE +++ R SGPGGQ V T++ V LTHIPTGIV+ C RS +NR TA +L
Sbjct: 232 EIDESELRIDVYRSSGPGGQGVNTTDSAVRLTHIPTGIVVSCQNERSQIQNRATAMNVL- 290
Query: 112 AQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKLDALK 150
Q + +D +R ++++ K+DALK
Sbjct: 291 ---------------QAKLLDRRR----QEEQAKMDALK 310
>gi|148266078|ref|YP_001232784.1| class I peptide chain release factor [Geobacter uraniireducens Rf4]
gi|146399578|gb|ABQ28211.1| Class I peptide chain release factor [Geobacter uraniireducens Rf4]
Length = 127
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/59 (57%), Positives = 41/59 (69%), Gaps = 1/59 (1%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTA-RELL 110
+ E+DI E+F+R SG GGQ V KT+ CV L H PTGI +KC + RS S NR A RELL
Sbjct: 23 VREEDIDEQFIRSSGKGGQHVNKTSTCVYLKHKPTGIEVKCMRERSQSLNRFLARRELL 81
>gi|401411785|ref|XP_003885340.1| hypothetical protein NCLIV_057350 [Neospora caninum Liverpool]
gi|325119759|emb|CBZ55312.1| hypothetical protein NCLIV_057350 [Neospora caninum Liverpool]
Length = 427
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 57/108 (52%), Gaps = 17/108 (15%)
Query: 39 NLVSNIDIYSTIPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRS 98
NL ID+ KID F+R SGPGGQ+V K+ V +TH PTG+ + C +++S
Sbjct: 259 NLEDKIDLSPPTLKID-------FMRASGPGGQSVNKSETAVRITHKPTGVSVHCMRTQS 311
Query: 99 LSENRKTARELLVAQWDVQVNGEDSLNAQIRRIDEKR-RATQEQKKRK 145
+EN+ A ELL AQ L +R+ E+R RA QK K
Sbjct: 312 QTENKNLALELLRAQL---------LQQMMRKASEERGRAIDAQKGSK 350
>gi|108804456|ref|YP_644393.1| peptide chain release factor 2 [Rubrobacter xylanophilus DSM 9941]
gi|108765699|gb|ABG04581.1| bacterial peptide chain release factor 2 (bRF-2) [Rubrobacter
xylanophilus DSM 9941]
Length = 366
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 43/61 (70%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
+IDEKD++ R SG GGQ V KT++ V +TH+PTGIV++C RS +NR+TA +L
Sbjct: 228 EIDEKDLKVDTYRASGAGGQHVNKTDSAVRITHLPTGIVVQCQNERSQHQNRETALRVLK 287
Query: 112 A 112
A
Sbjct: 288 A 288
>gi|403253693|ref|ZP_10919994.1| peptide chain release factor 1 [Thermotoga sp. EMP]
gi|402811227|gb|EJX25715.1| peptide chain release factor 1 [Thermotoga sp. EMP]
Length = 342
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 64/117 (54%), Gaps = 7/117 (5%)
Query: 3 IKIVMWPMRDRNLAGIRLLESQVTITRELRNDGYHRNLVSNIDIYSTIPKIDEKDIQER- 61
IK V++ ++ +N GI ES V + + + ++ + +P+I+EKDI+ R
Sbjct: 136 IKEVVFFVKGKNAYGILKYESGVHRVQRVPVTESGGRIHTSTATVAVLPEIEEKDIEIRP 195
Query: 62 ------FVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
R SG GGQ V KT + V +TH+PTGIV+ C RS +N++TA +L A
Sbjct: 196 EDLKIETFRASGHGGQYVNKTESAVRITHLPTGIVVSCQNERSQYQNKQTALRILRA 252
>gi|329936498|ref|ZP_08286234.1| peptide chain release factor 2 [Streptomyces griseoaurantiacus
M045]
gi|329304013|gb|EGG47895.1| peptide chain release factor 2 [Streptomyces griseoaurantiacus
M045]
Length = 368
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 64/123 (52%), Gaps = 25/123 (20%)
Query: 33 NDGYHRNLVSNIDIYSTIPK-----IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 87
N G + + ++I + + IDE +++ R SGPGGQ V T++ V LTHIPT
Sbjct: 208 NQGRRQTSFAGVEILPVVEQTDHVEIDESELRVDVYRSSGPGGQGVNTTDSAVRLTHIPT 267
Query: 88 GIVIKCHQSRSLSENRKTARELLVAQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKLD 147
GIV+ C RS +N+ TA +L A ++ E+RR ++++ K+D
Sbjct: 268 GIVVSCQNERSQIQNKATAMNVLQA-----------------KLLERRR---QEEQAKMD 307
Query: 148 ALK 150
ALK
Sbjct: 308 ALK 310
>gi|162312297|ref|NP_596474.2| peptide release factor (predicted) [Schizosaccharomyces pombe
972h-]
gi|212288570|sp|Q9Y811.2|YONI_SCHPO RecName: Full=Uncharacterized peptide chain release factor-like
protein C1105.18c, mitochondrial; Flags: Precursor
gi|157310457|emb|CAB50981.2| peptide release factor (predicted) [Schizosaccharomyces pombe]
Length = 162
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 54/83 (65%), Gaps = 1/83 (1%)
Query: 50 IPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTAREL 109
+ ++ E+DI+E F+ G GPGGQ + KT+ + HIPTGI+++ +RS +NR AR+
Sbjct: 44 LERLQEEDIEETFICGKGPGGQKINKTSIVAQVKHIPTGIIVRSQDTRSREQNRCIARKR 103
Query: 110 LVAQWDVQVNGEDSLNA-QIRRI 131
L + D +G DSL A +++RI
Sbjct: 104 LTEKVDEFKHGNDSLLARKVQRI 126
>gi|344258847|gb|EGW14951.1| Uncharacterized protein C12orf65-like [Cricetulus griseus]
Length = 101
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 37/52 (71%)
Query: 47 YSTIPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRS 98
Y + + E +++E+FV+G GPGGQA KTNNCVVL H+P+GIV+K S
Sbjct: 48 YPALLPLHESELEEQFVKGHGPGGQATNKTNNCVVLKHVPSGIVVKVDSGGS 99
>gi|377572554|ref|ZP_09801639.1| peptide chain release factor 2 [Gordonia terrae NBRC 100016]
gi|377530326|dbj|GAB46804.1| peptide chain release factor 2 [Gordonia terrae NBRC 100016]
Length = 371
Score = 65.5 bits (158), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 55/98 (56%), Gaps = 20/98 (20%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
+DE DI+ R SGPGGQ+V T++ V LTHIPTGIV+ C +S +N+ +A +L
Sbjct: 235 VDENDIKVDVYRSSGPGGQSVNTTDSAVRLTHIPTGIVVTCQNEKSQLQNKASAMRVL-- 292
Query: 113 QWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKLDALK 150
Q + +D KR ++++ +LDALK
Sbjct: 293 --------------QAKLLDRKR----QEERAELDALK 312
>gi|404216093|ref|YP_006670288.1| Protein chain release factor B [Gordonia sp. KTR9]
gi|403646892|gb|AFR50132.1| Protein chain release factor B [Gordonia sp. KTR9]
Length = 371
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 55/98 (56%), Gaps = 20/98 (20%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
+DE DI+ R SGPGGQ+V T++ V LTHIPTGIV+ C +S +N+ +A +L
Sbjct: 235 VDENDIKVDVYRSSGPGGQSVNTTDSAVRLTHIPTGIVVTCQNEKSQLQNKASAMRVL-- 292
Query: 113 QWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKLDALK 150
Q + +D KR ++++ +LDALK
Sbjct: 293 --------------QAKLLDRKR----QEERAELDALK 312
>gi|54293184|ref|YP_125599.1| hypothetical protein lpl0230 [Legionella pneumophila str. Lens]
gi|53753016|emb|CAH14459.1| hypothetical protein lpl0230 [Legionella pneumophila str. Lens]
Length = 136
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 49/87 (56%), Gaps = 7/87 (8%)
Query: 41 VSNIDIYSTIPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLS 100
++N+ IY T D+ E+F+ SG GGQ + KT + V L H+PTG+ +KC +SRS
Sbjct: 14 MTNLHIYET-------DLSEKFILSSGKGGQKLHKTASTVYLKHLPTGMEVKCQESRSRE 66
Query: 101 ENRKTARELLVAQWDVQVNGEDSLNAQ 127
+NR AR+ L + + E + Q
Sbjct: 67 DNRYFARQRLCEKLQAVFSDEKTKTQQ 93
>gi|21221417|ref|NP_627196.1| peptide chain release factor 2 [Streptomyces coelicolor A3(2)]
gi|289771299|ref|ZP_06530677.1| peptide chain release factor 2 [Streptomyces lividans TK24]
gi|19864260|sp|Q53915.2|RF2_STRCO RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|6912002|emb|CAB72218.1| chain release factor 2 [Streptomyces coelicolor A3(2)]
gi|289701498|gb|EFD68927.1| peptide chain release factor 2 [Streptomyces lividans TK24]
Length = 368
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 64/123 (52%), Gaps = 25/123 (20%)
Query: 33 NDGYHRNLVSNIDIYSTIPK-----IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 87
N G + + ++I + + IDE +++ R SGPGGQ V T++ V LTHIPT
Sbjct: 208 NQGRRQTSFAGVEILPVVEQTDHIEIDESELRVDVYRSSGPGGQGVNTTDSAVRLTHIPT 267
Query: 88 GIVIKCHQSRSLSENRKTARELLVAQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKLD 147
GIV+ C RS +N+ TA +L A ++ E+RR ++++ K+D
Sbjct: 268 GIVVSCQNERSQIQNKATAMNVLQA-----------------KLLERRR---QEEQAKMD 307
Query: 148 ALK 150
ALK
Sbjct: 308 ALK 310
>gi|15606882|ref|NP_214263.1| peptide chain release factor 2 [Aquifex aeolicus VF5]
gi|6225943|sp|O67695.1|RF2_AQUAE RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|2984119|gb|AAC07656.1| peptide chain release factor RF-2 [Aquifex aeolicus VF5]
Length = 373
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 45/74 (60%), Gaps = 8/74 (10%)
Query: 48 STIPKIDE--------KDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSL 99
S +P+IDE +D++ R SG GGQ V KT+ V +THIPTGI + C Q RS
Sbjct: 219 SVMPQIDEDIKIEIKPEDLKIETFRASGAGGQYVNKTDTAVRITHIPTGITVSCQQERSQ 278
Query: 100 SENRKTARELLVAQ 113
+N++ A ELL A+
Sbjct: 279 YQNKRKALELLKAK 292
>gi|386747633|ref|YP_006220841.1| peptide chain release factor 2 [Helicobacter cetorum MIT 99-5656]
gi|384553875|gb|AFI05631.1| peptide chain release factor 2 [Helicobacter cetorum MIT 99-5656]
Length = 363
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 41/59 (69%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELL 110
+IDEKD++ + R SG GGQ V KT + V +TH PTGIV++C RS +N+ +A ++L
Sbjct: 232 EIDEKDVRYDYYRASGAGGQHVNKTESAVRITHFPTGIVVQCQNDRSQHKNKASALKML 290
>gi|237786018|ref|YP_002906723.1| peptide chain release factor 2 [Corynebacterium kroppenstedtii DSM
44385]
gi|237758930|gb|ACR18180.1| peptide chain release factor RF-2 [Corynebacterium kroppenstedtii
DSM 44385]
Length = 379
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 50/88 (56%), Gaps = 5/88 (5%)
Query: 31 LRNDGYHRNLVSNIDIYSTIPK-----IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHI 85
N G + + +++ + K IDE D++ R SGPGGQ+V T++ V LTHI
Sbjct: 212 FDNQGRRQTSFAEVEVLPVVEKTDHIDIDENDVRVDVYRSSGPGGQSVNTTDSAVRLTHI 271
Query: 86 PTGIVIKCHQSRSLSENRKTARELLVAQ 113
PTGIV+ C +S +N+ +A +L A+
Sbjct: 272 PTGIVVTCQNEKSQIQNKASAMRVLAAK 299
>gi|1402638|dbj|BAA13170.1| PrfB [Streptomyces coelicolor]
Length = 368
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 64/123 (52%), Gaps = 25/123 (20%)
Query: 33 NDGYHRNLVSNIDIYSTIPK-----IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 87
N G + + ++I + + IDE +++ R SGPGGQ V T++ V LTHIPT
Sbjct: 208 NQGRRQTSFAGVEILPVVEQTDHIEIDESELRVDVYRSSGPGGQGVNTTDSAVRLTHIPT 267
Query: 88 GIVIKCHQSRSLSENRKTARELLVAQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKLD 147
GIV+ C RS +N+ TA +L A ++ E+RR ++++ K+D
Sbjct: 268 GIVVSCQNERSQIQNKATAMNVLQA-----------------KLLERRR---QEEQAKMD 307
Query: 148 ALK 150
ALK
Sbjct: 308 ALK 310
>gi|452943243|ref|YP_007499408.1| peptide chain release factor 2 [Hydrogenobaculum sp. HO]
gi|452881661|gb|AGG14365.1| peptide chain release factor 2 [Hydrogenobaculum sp. HO]
Length = 375
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 54/88 (61%), Gaps = 9/88 (10%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
+I E+D++ R SG GGQ V KT+ V +THIPTGIV+ C Q RS +NR+ A E+L
Sbjct: 229 EIKEEDLRIDTYRASGAGGQYVNKTDTAVRITHIPTGIVVACQQERSQIQNRRKAMEMLK 288
Query: 112 AQWDVQVNGEDSLNAQIRRIDEKRRATQ 139
A+ ++++I+EK+++ +
Sbjct: 289 ARL---------YQLELQKIEEKKKSLE 307
>gi|145596156|ref|YP_001160453.1| peptide chain release factor 1 [Salinispora tropica CNB-440]
gi|145305493|gb|ABP56075.1| bacterial peptide chain release factor 1 (bRF-1) [Salinispora
tropica CNB-440]
Length = 362
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 50/90 (55%), Gaps = 6/90 (6%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKT------A 106
ID +++ R SGPGGQ+V T++ V +TH+PTGIV+ C +S +NR+ A
Sbjct: 217 IDPNELRIDVFRSSGPGGQSVNTTDSAVRITHLPTGIVVSCQNEKSQLQNREQAMRILRA 276
Query: 107 RELLVAQWDVQVNGEDSLNAQIRRIDEKRR 136
R L VAQ D+ AQ+R +D R
Sbjct: 277 RLLAVAQEQADAAASDARKAQVRTVDRSER 306
>gi|269128206|ref|YP_003301576.1| peptide chain release factor 2 [Thermomonospora curvata DSM 43183]
gi|268313164|gb|ACY99538.1| peptide chain release factor 2 [Thermomonospora curvata DSM 43183]
Length = 378
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 49/86 (56%), Gaps = 5/86 (5%)
Query: 33 NDGYHRNLVSNIDIYSTIPK-----IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 87
N G + + +D+ + + +DE D++ R SGPGGQ V T++ V +THIPT
Sbjct: 208 NQGRRQTSFAGLDVVPVVEQSDHVEVDENDLRIDVYRSSGPGGQGVNTTDSAVRITHIPT 267
Query: 88 GIVIKCHQSRSLSENRKTARELLVAQ 113
GIV+ C RS +N+ TA +L A+
Sbjct: 268 GIVVSCQNERSQLQNKATAMAVLKAK 293
>gi|195952400|ref|YP_002120690.1| peptide chain release factor 2 [Hydrogenobaculum sp. Y04AAS1]
gi|195932012|gb|ACG56712.1| peptide chain release factor 2 [Hydrogenobaculum sp. Y04AAS1]
Length = 375
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 55/91 (60%), Gaps = 9/91 (9%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
+I E+D++ R SG GGQ V KT+ V +THIPTGIV+ C Q RS +NR+ A E+L
Sbjct: 229 EIKEEDLRIDTYRASGAGGQYVNKTDTAVRITHIPTGIVVACQQERSQIQNRRKAMEMLK 288
Query: 112 AQWDVQVNGEDSLNAQIRRIDEKRRATQEQK 142
A+ ++++I+EK+++ + K
Sbjct: 289 ARL---------YQLELQKIEEKKKSLEGPK 310
>gi|418475196|ref|ZP_13044622.1| peptide chain release factor 2 [Streptomyces coelicoflavus ZG0656]
gi|371544193|gb|EHN72927.1| peptide chain release factor 2 [Streptomyces coelicoflavus ZG0656]
Length = 352
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 64/123 (52%), Gaps = 25/123 (20%)
Query: 33 NDGYHRNLVSNIDIYSTIPK-----IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 87
N G + + ++I + + IDE +++ R SGPGGQ V T++ V LTHIPT
Sbjct: 192 NQGRRQTSFAGVEILPVVEQTDHIEIDESELRVDVYRSSGPGGQGVNTTDSAVRLTHIPT 251
Query: 88 GIVIKCHQSRSLSENRKTARELLVAQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKLD 147
GIV+ C RS +N+ TA +L A ++ E+RR ++++ K+D
Sbjct: 252 GIVVSCQNERSQIQNKATAMNVLQA-----------------KLLERRR---QEEQAKMD 291
Query: 148 ALK 150
ALK
Sbjct: 292 ALK 294
>gi|302551795|ref|ZP_07304137.1| peptide chain release factor 2 [Streptomyces viridochromogenes DSM
40736]
gi|302469413|gb|EFL32506.1| peptide chain release factor 2 [Streptomyces viridochromogenes DSM
40736]
Length = 368
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 56/99 (56%), Gaps = 20/99 (20%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
+IDE +++ R SGPGGQ V T++ V LTHIPTGIV+ C RS +N+ TA +L
Sbjct: 232 EIDESELRVDVYRSSGPGGQGVNTTDSAVRLTHIPTGIVVSCQNERSQIQNKATAMNVLQ 291
Query: 112 AQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKLDALK 150
A ++ E+RR ++++ K+DALK
Sbjct: 292 A-----------------KLLERRR---QEEQAKMDALK 310
>gi|159039554|ref|YP_001538807.1| peptide chain release factor 1 [Salinispora arenicola CNS-205]
gi|157918389|gb|ABV99816.1| peptide chain release factor 1 [Salinispora arenicola CNS-205]
Length = 362
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 50/90 (55%), Gaps = 6/90 (6%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKT------A 106
ID +++ R SGPGGQ+V T++ V +TH+PTGIV+ C +S +NR+ A
Sbjct: 217 IDPNELRIDVFRSSGPGGQSVNTTDSAVRITHLPTGIVVSCQNEKSQLQNREQALRILRA 276
Query: 107 RELLVAQWDVQVNGEDSLNAQIRRIDEKRR 136
R L VAQ D+ AQ+R +D R
Sbjct: 277 RLLAVAQEQADAAASDARKAQVRTVDRSER 306
>gi|118581341|ref|YP_902591.1| class I peptide chain release factor [Pelobacter propionicus DSM
2379]
gi|118504051|gb|ABL00534.1| Class I peptide chain release factor [Pelobacter propionicus DSM
2379]
Length = 117
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 49/79 (62%), Gaps = 3/79 (3%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
+ E+D++E+FVR SG GGQ V KT++ V L HIP+GI + + RS S NR AR L+
Sbjct: 23 VREEDLEEQFVRSSGSGGQHVNKTSSSVFLRHIPSGICVSASRERSQSVNRFLARRELLE 82
Query: 113 QWDVQVNGEDSLNAQIRRI 131
+ + Q E ++RRI
Sbjct: 83 RIEAQTGAE---TGEMRRI 98
>gi|51245661|ref|YP_065545.1| peptide chain release factor 2 [Desulfotalea psychrophila LSv54]
gi|50876698|emb|CAG36538.1| probable peptide chain release factor 2 [Desulfotalea psychrophila
LSv54]
Length = 285
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 43/61 (70%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
IDEKD++ R SG GGQ V KT++ + LTH+PTG+V++C RS N++ A ++L+A
Sbjct: 153 IDEKDLRVDTYRASGAGGQHVNKTDSAIRLTHLPTGVVVQCQNERSQHRNKEMAMKMLIA 212
Query: 113 Q 113
Q
Sbjct: 213 Q 213
>gi|119715986|ref|YP_922951.1| peptide chain release factor 1 [Nocardioides sp. JS614]
gi|166223579|sp|A1SHH9.1|RF1_NOCSJ RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|119536647|gb|ABL81264.1| bacterial peptide chain release factor 1 (bRF-1) [Nocardioides sp.
JS614]
Length = 357
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 51/91 (56%), Gaps = 6/91 (6%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTA----- 106
+IDE D++ R SGPGGQ+V T++ V +TH+PTGIV+ C +S +NR+ A
Sbjct: 215 QIDENDLRIDVFRSSGPGGQSVNTTDSAVRITHLPTGIVVSCQNEKSQLQNREQAMRILR 274
Query: 107 -RELLVAQWDVQVNGEDSLNAQIRRIDEKRR 136
R L AQ ++ +Q+R +D R
Sbjct: 275 SRLLAAAQEKADAEAGEARRSQVRTVDRSER 305
>gi|441190704|ref|ZP_20970707.1| peptide chain release factor 2 [Streptomyces rimosus subsp. rimosus
ATCC 10970]
gi|440613705|gb|ELQ77097.1| peptide chain release factor 2 [Streptomyces rimosus subsp. rimosus
ATCC 10970]
Length = 370
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 56/99 (56%), Gaps = 20/99 (20%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
+IDE +++ R SGPGGQ V T++ V LTHIPTGIV+ C RS +N+ TA +L
Sbjct: 232 EIDESELRVDVYRSSGPGGQGVNTTDSAVRLTHIPTGIVVSCQNERSQIQNKATAMNVLQ 291
Query: 112 AQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKLDALK 150
A ++ E+RR ++++ K+DALK
Sbjct: 292 A-----------------KLLERRR---QEEQAKMDALK 310
>gi|375091094|ref|ZP_09737395.1| peptide chain release factor 2 [Helcococcus kunzii ATCC 51366]
gi|374564456|gb|EHR35749.1| peptide chain release factor 2 [Helcococcus kunzii ATCC 51366]
Length = 349
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 66/121 (54%), Gaps = 12/121 (9%)
Query: 3 IKIVMWPMRDRNLAGIRLLESQVTITRELRNDGYHRNL-----VSNIDIYSTIP-----K 52
IK V ++ +N G L+++ + R +R + N +++D+Y I +
Sbjct: 156 IKSVTLMVKGKNAYG--YLKAERGVHRLVRISPFDSNARRHTSFASVDVYPEIDHDTEIE 213
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
IDEKD++ R SG GGQ V T++ V +THIPTG+ + C RS +NR+TA +L A
Sbjct: 214 IDEKDLRIDTYRSSGAGGQHVNTTDSAVRITHIPTGVTVSCQTERSQIQNRETAMSMLKA 273
Query: 113 Q 113
+
Sbjct: 274 K 274
>gi|118475480|ref|YP_892510.1| peptide chain release factor 2 [Campylobacter fetus subsp. fetus
82-40]
gi|166223624|sp|A0RQM7.1|RF2_CAMFF RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|118414706|gb|ABK83126.1| peptide chain release factor 2 [Campylobacter fetus subsp. fetus
82-40]
Length = 369
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 29/59 (49%), Positives = 42/59 (71%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELL 110
+I+EKD++ + R SG GGQ V KT + V +THIPTGIV++C RS +N+ TA ++L
Sbjct: 232 EIEEKDLRLDYYRASGAGGQHVNKTESAVRITHIPTGIVVQCQNDRSQHKNKATAMKML 290
>gi|357038237|ref|ZP_09100035.1| Peptide chain release factor 2 [Desulfotomaculum gibsoniae DSM
7213]
gi|355359812|gb|EHG07572.1| Peptide chain release factor 2 [Desulfotomaculum gibsoniae DSM
7213]
Length = 329
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 53/79 (67%), Gaps = 1/79 (1%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
+ID +D++ R G GGQ V KT++ V +TH+PTGIV++C RS NR TA +LL
Sbjct: 193 QIDPEDLKIDTYRSGGAGGQHVNKTDSAVRITHLPTGIVVQCQNERSQLSNRNTAMKLLK 252
Query: 112 AQ-WDVQVNGEDSLNAQIR 129
A+ +D+++ +D+ AQ+R
Sbjct: 253 AKLFDLEMQKKDAELAQMR 271
>gi|424821164|ref|ZP_18246202.1| Peptide chain release factor 2 [Campylobacter fetus subsp.
venerealis NCTC 10354]
gi|342327943|gb|EGU24427.1| Peptide chain release factor 2 [Campylobacter fetus subsp.
venerealis NCTC 10354]
Length = 369
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 29/59 (49%), Positives = 42/59 (71%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELL 110
+I+EKD++ + R SG GGQ V KT + V +THIPTGIV++C RS +N+ TA ++L
Sbjct: 232 EIEEKDLRLDYYRASGAGGQHVNKTESAVRITHIPTGIVVQCQNDRSQHKNKATAMKML 290
>gi|340793648|ref|YP_004759111.1| peptide chain release factor RF-2 [Corynebacterium variabile DSM
44702]
gi|340533558|gb|AEK36038.1| peptide chain release factor RF-2 [Corynebacterium variabile DSM
44702]
Length = 377
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 41/61 (67%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
IDE D++ R SGPGGQ+V T++ V LTHIPTGIV+ C +S +N+ +A +L A
Sbjct: 238 IDENDVRVDVYRSSGPGGQSVNTTDSAVRLTHIPTGIVVTCQNEKSQIQNKASAMRVLAA 297
Query: 113 Q 113
+
Sbjct: 298 K 298
>gi|289549137|ref|YP_003474125.1| peptide chain release factor 2 [Thermocrinis albus DSM 14484]
gi|289182754|gb|ADC89998.1| peptide chain release factor 2 [Thermocrinis albus DSM 14484]
Length = 372
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 56/103 (54%), Gaps = 17/103 (16%)
Query: 48 STIPKIDE--------KDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSL 99
+ +P+IDE +DI+ R SG GGQ V KT+ V + H PTGIV+ C Q RS
Sbjct: 218 TVVPQIDESINIEIREEDIEMETFRASGAGGQYVNKTDTAVRIRHKPTGIVVTCQQERSQ 277
Query: 100 SENRKTARELLVAQWDVQVNGEDSLNAQIRRIDEKRRATQEQK 142
+NR A ELL A+ +++ ++EK+RA + +K
Sbjct: 278 YQNRMKALELLKAKL---------YQLKLQELEEKKRALEGEK 311
>gi|254582148|ref|XP_002497059.1| ZYRO0D14476p [Zygosaccharomyces rouxii]
gi|238939951|emb|CAR28126.1| ZYRO0D14476p [Zygosaccharomyces rouxii]
Length = 155
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Query: 55 EKDIQERFVRGS-GPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
E +E+F+ G GPGGQ + K N+ V L H+PTGIV++C Q+RS +NRK ARE L
Sbjct: 31 ESQCEEKFLHGGRGPGGQKINKCNSKVQLKHLPTGIVVECQQTRSRDQNRKIAREKLA 88
>gi|443627028|ref|ZP_21111430.1| putative Peptide chain release factor 2 [Streptomyces
viridochromogenes Tue57]
gi|443339445|gb|ELS53685.1| putative Peptide chain release factor 2 [Streptomyces
viridochromogenes Tue57]
Length = 368
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 56/99 (56%), Gaps = 20/99 (20%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
+IDE D++ R SGPGGQ V T++ V +TH+PTGIV+ C RS +N+ TA +L
Sbjct: 232 EIDESDLRIDVYRSSGPGGQGVNTTDSAVRITHLPTGIVVSCQNERSQIQNKATAMNVLQ 291
Query: 112 AQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKLDALK 150
A ++ E+RR ++++ K+DALK
Sbjct: 292 A-----------------KLLERRR---QEEQAKMDALK 310
>gi|294629650|ref|ZP_06708210.1| peptide chain release factor 2 [Streptomyces sp. e14]
gi|292832983|gb|EFF91332.1| peptide chain release factor 2 [Streptomyces sp. e14]
Length = 371
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 64/123 (52%), Gaps = 25/123 (20%)
Query: 33 NDGYHRNLVSNIDIYSTIPK-----IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 87
N G + + ++I + + IDE +++ R SGPGGQ V T++ V LTH+PT
Sbjct: 208 NQGRRQTSFAGVEILPVVEQTDHIEIDESELRVDVYRSSGPGGQGVNTTDSAVRLTHLPT 267
Query: 88 GIVIKCHQSRSLSENRKTARELLVAQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKLD 147
GIV+ C RS +N+ TA +L A ++ E+RR ++++ K+D
Sbjct: 268 GIVVSCQNERSQIQNKATAMNVLQA-----------------KLLERRR---QEEQAKMD 307
Query: 148 ALK 150
ALK
Sbjct: 308 ALK 310
>gi|345854356|ref|ZP_08807192.1| peptide chain release factor 2 [Streptomyces zinciresistens K42]
gi|345634189|gb|EGX55860.1| peptide chain release factor 2 [Streptomyces zinciresistens K42]
Length = 368
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 56/99 (56%), Gaps = 20/99 (20%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
+IDE +++ R SGPGGQ V T++ V LTHIPTGIV+ C RS +N+ TA +L
Sbjct: 232 EIDESELRVDVYRSSGPGGQGVNTTDSAVRLTHIPTGIVVSCQNERSQIQNKATAMNVLQ 291
Query: 112 AQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKLDALK 150
A ++ E+RR QE++ R +DALK
Sbjct: 292 A-----------------KLLERRR--QEEQAR-MDALK 310
>gi|297588165|ref|ZP_06946809.1| peptide chain release factor RF2 [Finegoldia magna ATCC 53516]
gi|297574854|gb|EFH93574.1| peptide chain release factor RF2 [Finegoldia magna ATCC 53516]
Length = 329
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 49/78 (62%), Gaps = 5/78 (6%)
Query: 41 VSNIDIYSTIP-----KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQ 95
+++D++ I +ID+KD++ R SG GGQ V T++ V +THIPTG+ ++C
Sbjct: 181 FASVDVFPEIKDSHNIQIDDKDLKVDTYRASGAGGQHVNMTDSAVRITHIPTGVTVQCQT 240
Query: 96 SRSLSENRKTARELLVAQ 113
RS NRK A ++L+A+
Sbjct: 241 ERSQIANRKYAMDMLIAK 258
>gi|383807635|ref|ZP_09963195.1| chain release factor 2 [Candidatus Aquiluna sp. IMCC13023]
gi|383298989|gb|EIC91604.1| chain release factor 2 [Candidatus Aquiluna sp. IMCC13023]
Length = 367
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 56/105 (53%), Gaps = 16/105 (15%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
+I + DI+ R SGPGGQ+V T++ V +TH PTGIV+ C +S +N+ +A +L
Sbjct: 230 EIPDSDIRIDVFRSSGPGGQSVNTTDSAVRITHTPTGIVVSCQNEKSQLQNKASAMRVL- 288
Query: 112 AQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKLDALKKAWKER 156
Q + +D +RRA E++K +K +W E+
Sbjct: 289 ---------------QSKLLDAQRRADNEKRKELAGDVKASWGEQ 318
>gi|255725070|ref|XP_002547464.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
gi|240135355|gb|EER34909.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
Length = 172
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 57/102 (55%), Gaps = 12/102 (11%)
Query: 37 HRNLVSNIDIYSTIPKIDE-----------KDIQERFVRGS-GPGGQAVAKTNNCVVLTH 84
R L ++ ++ IPKI++ ++++E+F+ G GPGGQ + K N+ V L H
Sbjct: 9 QRQLSTSTRVFYAIPKINKLPPRPKHLIKEEELEEKFLHGGRGPGGQKINKCNSKVQLKH 68
Query: 85 IPTGIVIKCHQSRSLSENRKTARELLVAQWDVQVNGEDSLNA 126
IPTGIVI C +RS +NR ARE L + D N S N+
Sbjct: 69 IPTGIVIDCQATRSKEQNRAIAREKLALKLDDYYNPGTSRNS 110
>gi|238494178|ref|XP_002378325.1| peptidyl-tRNA hydrolase domain protein [Aspergillus flavus
NRRL3357]
gi|317148917|ref|XP_003190253.1| peptidyl-tRNA hydrolase domain protein [Aspergillus oryzae RIB40]
gi|220694975|gb|EED51318.1| peptidyl-tRNA hydrolase domain protein [Aspergillus flavus
NRRL3357]
Length = 176
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 47/72 (65%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
K+ + D+ +++G+GPGGQ + KTN+ V L H PTG+V+K +RS S+N K AR+LL
Sbjct: 40 KLHDADLTISYLKGTGPGGQKINKTNSAVQLIHKPTGLVVKSQATRSRSQNEKIARQLLA 99
Query: 112 AQWDVQVNGEDS 123
+ + G+ S
Sbjct: 100 DKVEQLEKGDQS 111
>gi|302560365|ref|ZP_07312707.1| peptide chain release factor 2 [Streptomyces griseoflavus Tu4000]
gi|302477983|gb|EFL41076.1| peptide chain release factor 2 [Streptomyces griseoflavus Tu4000]
Length = 368
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 64/123 (52%), Gaps = 25/123 (20%)
Query: 33 NDGYHRNLVSNIDIYSTIPK-----IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 87
N G + + ++I + + IDE +++ R SGPGGQ V T++ V LTH+PT
Sbjct: 208 NQGRRQTSFAGVEILPVVEQTDHIEIDESELRVDVYRSSGPGGQGVNTTDSAVRLTHLPT 267
Query: 88 GIVIKCHQSRSLSENRKTARELLVAQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKLD 147
GIV+ C RS +N+ TA +L A ++ E+RR ++++ K+D
Sbjct: 268 GIVVSCQNERSQIQNKATAMNVLQA-----------------KLLERRR---QEEQAKMD 307
Query: 148 ALK 150
ALK
Sbjct: 308 ALK 310
>gi|374989282|ref|YP_004964777.1| peptide chain release factor 2 [Streptomyces bingchenggensis BCW-1]
gi|297159934|gb|ADI09646.1| peptide chain release factor 2 [Streptomyces bingchenggensis BCW-1]
Length = 383
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 64/123 (52%), Gaps = 25/123 (20%)
Query: 33 NDGYHRNLVSNIDIYSTIPK-----IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 87
N G + + +++ + K IDE +++ R SGPGGQ V T++ V LTHIPT
Sbjct: 221 NQGRRQTSFAGVEVLPVVEKTDHIEIDESELRIDVYRSSGPGGQGVNTTDSAVRLTHIPT 280
Query: 88 GIVIKCHQSRSLSENRKTARELLVAQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKLD 147
GIV+ C RS +N+ +A +L A ++ E+RR ++++ K+D
Sbjct: 281 GIVVSCQNERSQIQNKASAMNVLQA-----------------KLLERRR---QEEQAKMD 320
Query: 148 ALK 150
ALK
Sbjct: 321 ALK 323
>gi|242279065|ref|YP_002991194.1| hypothetical protein Desal_1593 [Desulfovibrio salexigens DSM 2638]
gi|242121959|gb|ACS79655.1| hypothetical protein Desal_1593 [Desulfovibrio salexigens DSM 2638]
Length = 372
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 72/138 (52%), Gaps = 19/138 (13%)
Query: 10 MRDRNLAGIRLLESQVTITRELR-----NDGYHRNLVSNIDIYSTIPK-----IDEKDIQ 59
+R L L+ + I R +R G +++D+Y I + + ++DI+
Sbjct: 181 LRIEGLYAYGFLKGEAGIHRLIRISPFDASGRRHTSFASVDVYPEISQDIEIEVKDEDIR 240
Query: 60 ERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVAQWDVQVN 119
R SGPGGQ V KTN+ V +TH+PT IV++C +S +N++TA ++L ++ Q
Sbjct: 241 LDVFRASGPGGQHVNKTNSAVRITHLPTNIVVQCQNEKSQLKNKETAMKVLKSRLYEQ-- 298
Query: 120 GEDSLNAQIRRIDEKRRA 137
+++R +E +RA
Sbjct: 299 -------ELKRQEESKRA 309
>gi|45201377|ref|NP_986947.1| AGR281Cp [Ashbya gossypii ATCC 10895]
gi|44986311|gb|AAS54771.1| AGR281Cp [Ashbya gossypii ATCC 10895]
gi|374110197|gb|AEY99102.1| FAGR281Cp [Ashbya gossypii FDAG1]
Length = 176
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 41/59 (69%), Gaps = 1/59 (1%)
Query: 55 EKDIQERFVRGS-GPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
E I+E+F+ G GPGGQ + K N+ V L H+P+GIVI+C +RS +NRK ARE L A
Sbjct: 50 EASIEEKFLHGGRGPGGQKINKCNSKVQLRHVPSGIVIECQATRSREQNRKLAREKLAA 108
>gi|455649556|gb|EMF28360.1| peptide chain release factor 2 [Streptomyces gancidicus BKS 13-15]
Length = 368
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 56/99 (56%), Gaps = 20/99 (20%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
+IDE +++ R SGPGGQ V T++ V LTH+PTGIV+ C RS +N+ TA +L
Sbjct: 232 EIDESELRVDVYRSSGPGGQGVNTTDSAVRLTHLPTGIVVSCQNERSQIQNKATAMNVLQ 291
Query: 112 AQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKLDALK 150
A ++ E+RR ++++ K+DALK
Sbjct: 292 A-----------------KLLERRR---QEEQAKMDALK 310
>gi|367468573|ref|ZP_09468428.1| Peptide chain release factor 2 [Patulibacter sp. I11]
gi|365816357|gb|EHN11400.1| Peptide chain release factor 2 [Patulibacter sp. I11]
Length = 375
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 43/62 (69%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
+I ++D++ R SG GGQ V KT++ V LTHIPTGIV+ C Q RS S N+ TA ++L
Sbjct: 231 EIKDEDLRVDTYRASGAGGQHVNKTDSAVRLTHIPTGIVVACQQERSQSANKMTAMKMLY 290
Query: 112 AQ 113
A+
Sbjct: 291 AK 292
>gi|148270549|ref|YP_001245009.1| peptide chain release factor 1 [Thermotoga petrophila RKU-1]
gi|147736093|gb|ABQ47433.1| bacterial peptide chain release factor 1 (bRF-1) [Thermotoga
petrophila RKU-1]
Length = 342
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 64/117 (54%), Gaps = 7/117 (5%)
Query: 3 IKIVMWPMRDRNLAGIRLLESQVTITRELRNDGYHRNLVSNIDIYSTIPKIDEKDIQER- 61
I+ V++ ++ +N GI ES V + + + ++ + +P+I+EKDI+ R
Sbjct: 136 IREVVFFVKGKNAYGILKYESGVHRVQRVPVTESGGRIHTSTATVAVLPEIEEKDIEIRP 195
Query: 62 ------FVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
R SG GGQ V KT + V +TH+PTGIV+ C RS +N++TA +L A
Sbjct: 196 EDLKIETFRASGHGGQYVNKTESAVRITHLPTGIVVSCQNERSQYQNKQTALRILRA 252
>gi|222053782|ref|YP_002536144.1| class I peptide chain release factor [Geobacter daltonii FRC-32]
gi|221563071|gb|ACM19043.1| Class I peptide chain release factor [Geobacter daltonii FRC-32]
Length = 139
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 39/59 (66%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
+ E+D+ E+F+R SG GGQ V KT+ CV L H PTGI +KC RS S NR AR L+
Sbjct: 23 VREEDLDEQFIRSSGKGGQHVNKTSTCVYLRHRPTGIEVKCMAERSQSLNRFLARRQLL 81
>gi|15644115|ref|NP_229164.1| peptide chain release factor 1 [Thermotoga maritima MSB8]
gi|418045420|ref|ZP_12683515.1| peptide chain release factor 1 [Thermotoga maritima MSB8]
gi|7388056|sp|Q9X183.1|RF1_THEMA RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|52695394|pdb|1RQ0|A Chain A, Crystal Structure Of Peptide Releasing Factor 1
gi|52695395|pdb|1RQ0|B Chain B, Crystal Structure Of Peptide Releasing Factor 1
gi|52695396|pdb|1RQ0|C Chain C, Crystal Structure Of Peptide Releasing Factor 1
gi|4981923|gb|AAD36433.1|AE001790_5 peptide chain release factor RF-1 [Thermotoga maritima MSB8]
gi|351676305|gb|EHA59458.1| peptide chain release factor 1 [Thermotoga maritima MSB8]
Length = 342
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 64/117 (54%), Gaps = 7/117 (5%)
Query: 3 IKIVMWPMRDRNLAGIRLLESQVTITRELRNDGYHRNLVSNIDIYSTIPKIDEKDIQER- 61
I+ V++ ++ +N GI ES V + + + ++ + +P+I+EKDI+ R
Sbjct: 136 IREVVFFVKGKNAYGILKYESGVHRVQRVPVTESGGRIHTSTATVAVLPEIEEKDIEIRP 195
Query: 62 ------FVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
R SG GGQ V KT + V +TH+PTGIV+ C RS +N++TA +L A
Sbjct: 196 EDLKIETFRASGHGGQYVNKTESAVRITHLPTGIVVSCQNERSQYQNKQTALRILRA 252
>gi|116493078|ref|YP_804813.1| peptide chain release factor 1 [Pediococcus pentosaceus ATCC 25745]
gi|421894487|ref|ZP_16324975.1| peptide chain release factor 1 [Pediococcus pentosaceus IE-3]
gi|116103228|gb|ABJ68371.1| bacterial peptide chain release factor 1 (bRF-1) [Pediococcus
pentosaceus ATCC 25745]
gi|385272577|emb|CCG90347.1| peptide chain release factor 1 [Pediococcus pentosaceus IE-3]
Length = 359
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 50/78 (64%), Gaps = 2/78 (2%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
+ID+KDI+ R SG GGQ + KT++ V +TH+PTGIV+ RS +NR+ A +L
Sbjct: 216 EIDQKDIRTDVYRSSGAGGQHINKTSSAVRMTHLPTGIVVAMQDERSQQQNREKAMRILK 275
Query: 112 AQ-WD-VQVNGEDSLNAQ 127
A+ +D Q ED+ NA+
Sbjct: 276 ARVYDYYQTQEEDAYNAE 293
>gi|297621679|ref|YP_003709816.1| peptide chain release factor 1 [Waddlia chondrophila WSU 86-1044]
gi|297376980|gb|ADI38810.1| putative peptide chain release factor 1 [Waddlia chondrophila WSU
86-1044]
gi|337292999|emb|CCB90997.1| putative peptide chain release factor 1 [Waddlia chondrophila
2032/99]
Length = 139
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 41/66 (62%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
I +D+ E+F+ GSG GGQ V KT +CV L H P+GI IKC RS NR AR LL
Sbjct: 20 IRNEDLTEKFILGSGKGGQKVNKTASCVYLKHEPSGIEIKCQLERSRELNRFYARRLLCE 79
Query: 113 QWDVQV 118
+ + ++
Sbjct: 80 KIEEKI 85
>gi|93279782|pdb|2FVO|A Chain A, Docking Of The Modified Rf1 X-ray Structure Into The Low
Resolution Cryo-em Map Of E.coli 70s Ribosome Bound With
Rf1
Length = 333
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 64/117 (54%), Gaps = 7/117 (5%)
Query: 3 IKIVMWPMRDRNLAGIRLLESQVTITRELRNDGYHRNLVSNIDIYSTIPKIDEKDIQER- 61
I+ V++ ++ +N GI ES V + + + ++ + +P+I+EKDI+ R
Sbjct: 136 IREVVFFVKGKNAYGILKYESGVHRVQRVPVTESGGRIHTSTATVAVLPEIEEKDIEIRP 195
Query: 62 ------FVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
R SG GGQ V KT + V +TH+PTGIV+ C RS +N++TA +L A
Sbjct: 196 EDLKIETFRASGHGGQYVNKTESAVRITHLPTGIVVSCQNERSQYQNKQTALRILRA 252
>gi|395773704|ref|ZP_10454219.1| peptide chain release factor 2 [Streptomyces acidiscabies 84-104]
Length = 368
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 56/99 (56%), Gaps = 20/99 (20%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
+IDE +++ R SGPGGQ V T++ V LTH+PTGIV+ C RS +N+ TA +L
Sbjct: 232 EIDESELRVDVYRSSGPGGQGVNTTDSAVRLTHLPTGIVVSCQNERSQIQNKATAMNVLQ 291
Query: 112 AQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKLDALK 150
A ++ E+RR ++++ K+DALK
Sbjct: 292 A-----------------KLLERRR---QEEQAKMDALK 310
>gi|404257492|ref|ZP_10960817.1| peptide chain release factor 2 [Gordonia namibiensis NBRC 108229]
gi|403403887|dbj|GAB99226.1| peptide chain release factor 2 [Gordonia namibiensis NBRC 108229]
Length = 373
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 41/61 (67%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
+DE DI+ R SGPGGQ+V T++ V LTHIPTGIV+ C +S +N+ +A +L A
Sbjct: 237 VDENDIKVDVYRSSGPGGQSVNTTDSAVRLTHIPTGIVVTCQNEKSQLQNKASAMRVLQA 296
Query: 113 Q 113
+
Sbjct: 297 K 297
>gi|347736698|ref|ZP_08869272.1| peptide chain release factor 2 PrfB [Azospirillum amazonense Y2]
gi|346919737|gb|EGY01135.1| peptide chain release factor 2 PrfB [Azospirillum amazonense Y2]
Length = 319
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 43/63 (68%)
Query: 50 IPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTAREL 109
+ +I+EKD++ R SG GGQ V KT++ V LTH+PTGIV+ C Q RS +NR A ++
Sbjct: 175 VVEINEKDVRVDTYRASGAGGQHVNKTDSAVRLTHMPTGIVVACQQERSQHKNRSKAWDM 234
Query: 110 LVA 112
L A
Sbjct: 235 LRA 237
>gi|304439754|ref|ZP_07399652.1| peptide chain release factor RF2 [Peptoniphilus duerdenii ATCC
BAA-1640]
gi|304371741|gb|EFM25349.1| peptide chain release factor RF2 [Peptoniphilus duerdenii ATCC
BAA-1640]
Length = 368
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 50/78 (64%), Gaps = 5/78 (6%)
Query: 41 VSNIDIYSTIPKIDEKDIQERFV-----RGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQ 95
S++D+Y + +++ DI+ + R SG GGQ V T++ V +THIPTG+V++C
Sbjct: 218 FSSVDVYPELEDVEDVDIKPEDLKIDTYRSSGAGGQHVNTTDSAVRITHIPTGVVVQCQN 277
Query: 96 SRSLSENRKTARELLVAQ 113
RS +NR+TA +LL A+
Sbjct: 278 ERSQIQNRETAMKLLKAK 295
>gi|297194069|ref|ZP_06911467.1| peptide chain release factor 2 [Streptomyces pristinaespiralis ATCC
25486]
gi|297152097|gb|EDY64812.2| peptide chain release factor 2 [Streptomyces pristinaespiralis ATCC
25486]
Length = 340
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 64/123 (52%), Gaps = 25/123 (20%)
Query: 33 NDGYHRNLVSNIDIYSTIPK-----IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 87
N G + + +++ + K IDE +++ R SGPGGQ V T++ V LTHIPT
Sbjct: 180 NQGRRQTSFAGVEVLPVVEKTDHIEIDESELRVDVYRASGPGGQGVNTTDSAVRLTHIPT 239
Query: 88 GIVIKCHQSRSLSENRKTARELLVAQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKLD 147
GIV+ C RS +N+ +A +L A ++ E+RR QE++ R +D
Sbjct: 240 GIVVSCQNERSQIQNKASAMNVLQA-----------------KLLERRR--QEEQAR-MD 279
Query: 148 ALK 150
ALK
Sbjct: 280 ALK 282
>gi|209964906|ref|YP_002297821.1| peptide chain release factor 2 PrfB [Rhodospirillum centenum SW]
gi|209958372|gb|ACI99008.1| peptide chain release factor 2 PrfB [Rhodospirillum centenum SW]
Length = 319
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 43/63 (68%)
Query: 50 IPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTAREL 109
+ +I+EKD++ R SG GGQ V KT++ V LTH+PTGIV+ C Q RS +NR A ++
Sbjct: 175 VVEINEKDVKVDTYRSSGAGGQHVNKTDSAVRLTHLPTGIVVACQQERSQHKNRAKAWDM 234
Query: 110 LVA 112
L A
Sbjct: 235 LRA 237
>gi|409390739|ref|ZP_11242451.1| peptide chain release factor 2 [Gordonia rubripertincta NBRC
101908]
gi|403199116|dbj|GAB85685.1| peptide chain release factor 2 [Gordonia rubripertincta NBRC
101908]
Length = 373
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 41/61 (67%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
+DE DI+ R SGPGGQ+V T++ V LTHIPTGIV+ C +S +N+ +A +L A
Sbjct: 237 VDENDIKVDVYRSSGPGGQSVNTTDSAVRLTHIPTGIVVTCQNEKSQLQNKASAMRVLQA 296
Query: 113 Q 113
+
Sbjct: 297 K 297
>gi|303235160|ref|ZP_07321780.1| peptide chain release factor 2 [Finegoldia magna BVS033A4]
gi|302493752|gb|EFL53538.1| peptide chain release factor 2 [Finegoldia magna BVS033A4]
Length = 329
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 49/78 (62%), Gaps = 5/78 (6%)
Query: 41 VSNIDIYSTIP-----KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQ 95
+++D++ I +ID+KD++ R SG GGQ V T++ V +THIPTG+ ++C
Sbjct: 181 FASVDVFPEIKDNHDIQIDDKDLKIDTYRASGAGGQHVNMTDSAVRITHIPTGVTVQCQT 240
Query: 96 SRSLSENRKTARELLVAQ 113
RS NRK A ++L+A+
Sbjct: 241 ERSQIANRKYAMDMLIAK 258
>gi|302380960|ref|ZP_07269421.1| peptide chain release factor 2 [Finegoldia magna ACS-171-V-Col3]
gi|302311181|gb|EFK93201.1| peptide chain release factor 2 [Finegoldia magna ACS-171-V-Col3]
Length = 329
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 49/78 (62%), Gaps = 5/78 (6%)
Query: 41 VSNIDIYSTIP-----KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQ 95
+++D++ I +ID+KD++ R SG GGQ V T++ V +THIPTG+ ++C
Sbjct: 181 FASVDVFPEIKDNHDIQIDDKDLKIDTYRASGAGGQHVNMTDSAVRITHIPTGVTVQCQT 240
Query: 96 SRSLSENRKTARELLVAQ 113
RS NRK A ++L+A+
Sbjct: 241 ERSQIANRKYAMDMLIAK 258
>gi|169825227|ref|YP_001692838.1| peptide chain release factor B [Finegoldia magna ATCC 29328]
gi|417924978|ref|ZP_12568405.1| peptide chain release factor 2 [Finegoldia magna
SY403409CC001050417]
gi|167832032|dbj|BAG08948.1| peptide chain release factor B [Finegoldia magna ATCC 29328]
gi|341592275|gb|EGS35161.1| peptide chain release factor 2 [Finegoldia magna
SY403409CC001050417]
Length = 324
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 49/78 (62%), Gaps = 5/78 (6%)
Query: 41 VSNIDIYSTIP-----KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQ 95
+++D++ I +ID+KD++ R SG GGQ V T++ V +THIPTG+ ++C
Sbjct: 176 FASVDVFPEIKDNHDIQIDDKDLKIDTYRASGAGGQHVNMTDSAVRITHIPTGVTVQCQT 235
Query: 96 SRSLSENRKTARELLVAQ 113
RS NRK A ++L+A+
Sbjct: 236 ERSQIANRKYAMDMLIAK 253
>gi|402078884|gb|EJT74149.1| peptidyl-tRNA hydrolase domain-containing protein [Gaeumannomyces
graminis var. tritici R3-111a-1]
Length = 167
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/52 (57%), Positives = 37/52 (71%)
Query: 75 KTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVAQWDVQVNGEDSLNA 126
KTN+ V L HIPTG+V+KC +RS +NRK AR+LL A+ DV NGE S A
Sbjct: 40 KTNSAVQLKHIPTGLVVKCQATRSRDQNRKIARDLLAAKLDVMFNGEQSRQA 91
>gi|343924877|ref|ZP_08764414.1| peptide chain release factor 2 [Gordonia alkanivorans NBRC 16433]
gi|343765223|dbj|GAA11340.1| peptide chain release factor 2 [Gordonia alkanivorans NBRC 16433]
Length = 373
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 41/61 (67%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
+DE DI+ R SGPGGQ+V T++ V LTHIPTGIV+ C +S +N+ +A +L A
Sbjct: 237 VDENDIKVDVYRSSGPGGQSVNTTDSAVRLTHIPTGIVVTCQNEKSQLQNKASAMRVLQA 296
Query: 113 Q 113
+
Sbjct: 297 K 297
>gi|72162878|ref|YP_290535.1| peptide chain release factor 2 [Thermobifida fusca YX]
gi|71916610|gb|AAZ56512.1| bacterial peptide chain release factor 2 (bRF-2) [Thermobifida
fusca YX]
Length = 375
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 41/62 (66%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
+IDE +++ R SGPGGQ V T++ V +TH+PTGIV+ C RS +NR TA +L
Sbjct: 232 EIDESELRIDVYRSSGPGGQGVNTTDSAVRITHLPTGIVVSCQNERSQLQNRATAMSILQ 291
Query: 112 AQ 113
A+
Sbjct: 292 AK 293
>gi|452993792|emb|CCQ94608.1| Peptide chain release factor 2 [Clostridium ultunense Esp]
Length = 346
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 48/78 (61%), Gaps = 5/78 (6%)
Query: 41 VSNIDIYSTIP-----KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQ 95
++IDIY + +I+E DI+ R SG GGQ V T++ V +THIPTGI+++C
Sbjct: 196 FASIDIYPELDDDMDIEINESDIKIDTYRASGAGGQHVNTTDSAVRVTHIPTGIIVQCQN 255
Query: 96 SRSLSENRKTARELLVAQ 113
RS NR TA ++L A+
Sbjct: 256 ERSQHSNRLTAMKMLKAK 273
>gi|404497824|ref|YP_006721930.1| peptidyl-tRNA hydrolase-like protein [Geobacter metallireducens
GS-15]
gi|418067860|ref|ZP_12705190.1| Class I peptide chain release factor [Geobacter metallireducens
RCH3]
gi|78195424|gb|ABB33191.1| peptidyl-tRNA hydrolase-related protein [Geobacter metallireducens
GS-15]
gi|373558039|gb|EHP84404.1| Class I peptide chain release factor [Geobacter metallireducens
RCH3]
Length = 121
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/60 (55%), Positives = 40/60 (66%), Gaps = 1/60 (1%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTA-RELLV 111
+ E D++E FVR SG GGQ V KT CV + H PTGI +KC + RS S NR A RE+LV
Sbjct: 25 VAEADLEESFVRSSGAGGQHVNKTATCVQIKHRPTGIEVKCMKDRSQSVNRFLARREILV 84
>gi|345015595|ref|YP_004817949.1| peptide chain release factor 2 [Streptomyces violaceusniger Tu
4113]
gi|344041944|gb|AEM87669.1| Peptide chain release factor 2 [Streptomyces violaceusniger Tu
4113]
Length = 370
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 56/99 (56%), Gaps = 20/99 (20%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
+IDE +++ R SGPGGQ V T++ V LTHIPTGIV+ C RS +N+ +A +L
Sbjct: 232 EIDESELRVDVYRSSGPGGQGVNTTDSAVRLTHIPTGIVVSCQNERSQIQNKASAMNVLQ 291
Query: 112 AQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKLDALK 150
A ++ E+RR ++++ K+DALK
Sbjct: 292 A-----------------KLLERRR---QEEQAKMDALK 310
>gi|271962992|ref|YP_003337188.1| peptide chain release factor 2 [Streptosporangium roseum DSM 43021]
gi|270506167|gb|ACZ84445.1| peptide chain release factor 2 [Streptosporangium roseum DSM 43021]
Length = 372
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 44/83 (53%), Gaps = 5/83 (6%)
Query: 33 NDGYHRNLVSNIDIYSTIPKIDEKDIQER-----FVRGSGPGGQAVAKTNNCVVLTHIPT 87
N G + + +D+ + D DI E R SGPGGQ V T++ V LTH+PT
Sbjct: 208 NQGRRQTSFAGVDVVPVVETTDHIDINEDDLRVDVYRSSGPGGQGVNTTDSAVRLTHLPT 267
Query: 88 GIVIKCHQSRSLSENRKTARELL 110
GIV+ C RS +N+ TA +L
Sbjct: 268 GIVVSCQNERSQLQNKATAMAVL 290
>gi|453383221|dbj|GAC82508.1| peptide chain release factor 2 [Gordonia paraffinivorans NBRC
108238]
Length = 373
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 41/61 (67%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
IDE D++ R SGPGGQ+V T++ V LTHIPTGIV+ C +S +N+ +A +L A
Sbjct: 237 IDENDLKVDVYRSSGPGGQSVNTTDSAVRLTHIPTGIVVTCQNEKSQLQNKASAMRVLQA 296
Query: 113 Q 113
+
Sbjct: 297 K 297
>gi|426375274|ref|XP_004054469.1| PREDICTED: peptide chain release factor 1, mitochondrial [Gorilla
gorilla gorilla]
Length = 445
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 59/105 (56%), Gaps = 14/105 (13%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
K+D KD++ R GPGGQ V KT++ V L HIPTG+V++C Q RS +N++ A +L
Sbjct: 294 KLDPKDLRIDTFRAKGPGGQHVNKTDSAVRLVHIPTGLVVECQQERSQIKNKEIAFRVLR 353
Query: 112 AQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKLDALKKAWKER 156
A+ Q+ I++ +R Q+Q RKL +A ER
Sbjct: 354 ARLYQQI------------IEKDKR--QQQSARKLQVGTRAQSER 384
>gi|115380059|ref|ZP_01467103.1| peptide chain release factor 2, programmed [Stigmatella aurantiaca
DW4/3-1]
gi|115362934|gb|EAU62125.1| peptide chain release factor 2, programmed [Stigmatella aurantiaca
DW4/3-1]
Length = 309
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 69/133 (51%), Gaps = 19/133 (14%)
Query: 21 LESQVTITRELRNDGYHRNL-----VSNIDIYSTIPK-----IDEKDIQERFVRGSGPGG 70
L+++V + R +R + N +++D+Y + I EKD + +F+RG G GG
Sbjct: 126 LKAEVGVHRLVRISPFDANARRQTAFASVDVYPEVDDSIRIDIPEKDYELKFIRGGGAGG 185
Query: 71 QAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVAQWDVQVNGEDSLNAQIRR 130
Q V KT++ L H+PT I+I C RS S N+ A ++L A+ ++++
Sbjct: 186 QKVNKTSSTAQLRHLPTNILITCQTERSQSANKDMAFKILRARL---------YELELKK 236
Query: 131 IDEKRRATQEQKK 143
+ +R A + QKK
Sbjct: 237 REAERDAAEAQKK 249
>gi|117928939|ref|YP_873490.1| peptide chain release factor 2 [Acidothermus cellulolyticus 11B]
gi|166223620|sp|A0LVP4.1|RF2_ACIC1 RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|117649402|gb|ABK53504.1| bacterial peptide chain release factor 2 (bRF-2) [Acidothermus
cellulolyticus 11B]
Length = 369
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 43/77 (55%), Gaps = 5/77 (6%)
Query: 41 VSNIDIYSTIPKIDEKDIQER-----FVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQ 95
+ +D+ + K D DI E R SGPGGQ V T++ V +TH+PTGIV+ C
Sbjct: 216 FAGVDVVPVVEKTDHIDIPEDEIRVDVFRSSGPGGQGVNTTDSAVRITHLPTGIVVTCQN 275
Query: 96 SRSLSENRKTARELLVA 112
RS +NR TA +L A
Sbjct: 276 ERSQLQNRATAMMVLQA 292
>gi|441513034|ref|ZP_20994866.1| peptide chain release factor 2 [Gordonia amicalis NBRC 100051]
gi|441452015|dbj|GAC52827.1| peptide chain release factor 2 [Gordonia amicalis NBRC 100051]
Length = 371
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 41/61 (67%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
+DE D++ R SGPGGQ+V T++ V LTHIPTGIV+ C +S +N+ +A +L A
Sbjct: 235 VDENDVKVDVYRSSGPGGQSVNTTDSAVRLTHIPTGIVVTCQNEKSQLQNKASAMRVLQA 294
Query: 113 Q 113
+
Sbjct: 295 K 295
>gi|441507575|ref|ZP_20989501.1| peptide chain release factor 2 [Gordonia aichiensis NBRC 108223]
gi|441448651|dbj|GAC47462.1| peptide chain release factor 2 [Gordonia aichiensis NBRC 108223]
Length = 371
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 41/61 (67%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
+DE D++ R SGPGGQ+V T++ V LTHIPTGIV+ C +S +N+ +A +L A
Sbjct: 235 VDENDVKVDVYRSSGPGGQSVNTTDSAVRLTHIPTGIVVTCQNEKSQLQNKASAMRVLQA 294
Query: 113 Q 113
+
Sbjct: 295 K 295
>gi|377563641|ref|ZP_09792980.1| peptide chain release factor 2 [Gordonia sputi NBRC 100414]
gi|377529088|dbj|GAB38145.1| peptide chain release factor 2 [Gordonia sputi NBRC 100414]
Length = 371
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 41/61 (67%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
+DE D++ R SGPGGQ+V T++ V LTHIPTGIV+ C +S +N+ +A +L A
Sbjct: 235 VDENDVKVDVYRSSGPGGQSVNTTDSAVRLTHIPTGIVVTCQNEKSQLQNKASAMRVLQA 294
Query: 113 Q 113
+
Sbjct: 295 K 295
>gi|152991276|ref|YP_001356998.1| peptide chain release factor 2 [Nitratiruptor sp. SB155-2]
gi|166225114|sp|A6Q582.1|RF2_NITSB RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|151423137|dbj|BAF70641.1| peptide chain release factor 2 [Nitratiruptor sp. SB155-2]
Length = 368
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 41/58 (70%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELL 110
I++KDI+ R SG GGQ V KT++ + +THIPTGIV++C RS +NR TA ++L
Sbjct: 233 IEDKDIRVDTYRASGAGGQHVNKTDSAIRITHIPTGIVVQCQNDRSQHKNRATAMKML 290
>gi|377562090|ref|ZP_09791505.1| peptide chain release factor 2 [Gordonia otitidis NBRC 100426]
gi|377520760|dbj|GAB36670.1| peptide chain release factor 2 [Gordonia otitidis NBRC 100426]
Length = 371
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 41/61 (67%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
+DE D++ R SGPGGQ+V T++ V LTHIPTGIV+ C +S +N+ +A +L A
Sbjct: 235 VDENDVKVDVYRSSGPGGQSVNTTDSAVRLTHIPTGIVVTCQNEKSQLQNKASAMRVLQA 294
Query: 113 Q 113
+
Sbjct: 295 K 295
>gi|256390407|ref|YP_003111971.1| peptide chain release factor 1 [Catenulispora acidiphila DSM 44928]
gi|256356633|gb|ACU70130.1| peptide chain release factor 1 [Catenulispora acidiphila DSM 44928]
Length = 356
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 53/91 (58%), Gaps = 6/91 (6%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKT------ 105
+I+ D++ R SGPGGQ+V T++ V +TH+PTG+V+ C +S +N+++
Sbjct: 214 EINANDLRIDVFRSSGPGGQSVNTTDSAVRITHLPTGVVVSCQNEKSQLQNKESAMRILR 273
Query: 106 ARELLVAQWDVQVNGEDSLNAQIRRIDEKRR 136
AR L VAQ + D+ +QIR +D R
Sbjct: 274 ARLLAVAQEEADREASDTRKSQIRTMDRSER 304
>gi|19552028|ref|NP_600030.1| peptide chain release factor 2 [Corynebacterium glutamicum ATCC
13032]
gi|62389691|ref|YP_225093.1| peptide chain release factor 2 [Corynebacterium glutamicum ATCC
13032]
gi|145294961|ref|YP_001137782.1| peptide chain release factor 2 [Corynebacterium glutamicum R]
gi|418246625|ref|ZP_12873019.1| peptide chain release factor 2 [Corynebacterium glutamicum ATCC
14067]
gi|24638152|sp|Q8NS78.1|RF2_CORGL RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|166223627|sp|A4QCD3.1|RF2_CORGB RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|21323567|dbj|BAB98194.1| Protein chain release factor B [Corynebacterium glutamicum ATCC
13032]
gi|41325026|emb|CAF19507.1| PEPTIDE CHAIN RELEASE FACTOR 2 [Corynebacterium glutamicum ATCC
13032]
gi|140844881|dbj|BAF53880.1| hypothetical protein [Corynebacterium glutamicum R]
gi|354509240|gb|EHE82175.1| peptide chain release factor 2 [Corynebacterium glutamicum ATCC
14067]
Length = 368
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 50/88 (56%), Gaps = 5/88 (5%)
Query: 31 LRNDGYHRNLVSNIDIYSTIPKIDEKDIQERFVR-----GSGPGGQAVAKTNNCVVLTHI 85
N G + + +++ + K+D DI + VR SGPGGQ+V T++ V LTHI
Sbjct: 203 FDNQGRRQTSFAEVEVLPVVEKVDSIDIPDADVRVDVYRSSGPGGQSVNTTDSAVRLTHI 262
Query: 86 PTGIVIKCHQSRSLSENRKTARELLVAQ 113
PTGIV+ C +S +N+ +A +L A+
Sbjct: 263 PTGIVVTCQNEKSQIQNKASAMRVLQAK 290
>gi|417971945|ref|ZP_12612861.1| peptide chain release factor 2 [Corynebacterium glutamicum S9114]
gi|344043699|gb|EGV39387.1| peptide chain release factor 2 [Corynebacterium glutamicum S9114]
Length = 368
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 50/88 (56%), Gaps = 5/88 (5%)
Query: 31 LRNDGYHRNLVSNIDIYSTIPKIDEKDIQERFVR-----GSGPGGQAVAKTNNCVVLTHI 85
N G + + +++ + K+D DI + VR SGPGGQ+V T++ V LTHI
Sbjct: 203 FDNQGRRQTSFAEVEVLPVVEKVDSIDIPDADVRVDVYRSSGPGGQSVNTTDSAVRLTHI 262
Query: 86 PTGIVIKCHQSRSLSENRKTARELLVAQ 113
PTGIV+ C +S +N+ +A +L A+
Sbjct: 263 PTGIVVTCQNEKSQIQNKASAMRVLQAK 290
>gi|297693942|ref|XP_002824259.1| PREDICTED: peptide chain release factor 1, mitochondrial isoform 2
[Pongo abelii]
Length = 445
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 59/105 (56%), Gaps = 14/105 (13%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
K+D KD++ R GPGGQ V KT++ V L HIPTG+V++C Q RS +N++ A +L
Sbjct: 294 KLDPKDLRIDTFRAKGPGGQHVNKTDSAVRLVHIPTGLVVECQQERSQIKNKEIAFRVLR 353
Query: 112 AQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKLDALKKAWKER 156
A+ Q+ I++ +R Q+Q RKL +A ER
Sbjct: 354 ARLYQQI------------IEKDKR--QQQSARKLQVGTRAQSER 384
>gi|294142153|ref|YP_003558131.1| peptide chain release factor 1 [Shewanella violacea DSS12]
gi|293328622|dbj|BAJ03353.1| peptide chain release factor 1 [Shewanella violacea DSS12]
Length = 361
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 55/96 (57%), Gaps = 15/96 (15%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
KI+ D++ R SG GGQ V KT++ + LTHIP+GIV++C RS +NR A +
Sbjct: 218 KINPADLKVDTFRASGAGGQHVNKTDSAIRLTHIPSGIVVECQDQRSQHKNRAQAMSV-- 275
Query: 112 AQWDVQVNGEDSLNAQIRRI-DEKRRATQEQKKRKL 146
L+A+I+ + DEKRR+ +E +R L
Sbjct: 276 ------------LSARIQAVEDEKRRSAEETTRRNL 299
>gi|385142948|emb|CCH23987.1| peptide chain release factor 2 [Corynebacterium glutamicum K051]
Length = 368
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 50/88 (56%), Gaps = 5/88 (5%)
Query: 31 LRNDGYHRNLVSNIDIYSTIPKIDEKDIQERFVR-----GSGPGGQAVAKTNNCVVLTHI 85
N G + + +++ + K+D DI + VR SGPGGQ+V T++ V LTHI
Sbjct: 203 FDNQGRRQTSFAEVEVLPVVEKVDSIDIPDADVRVDVYRSSGPGGQSVNTTDSAVRLTHI 262
Query: 86 PTGIVIKCHQSRSLSENRKTARELLVAQ 113
PTGIV+ C +S +N+ +A +L A+
Sbjct: 263 PTGIVVTCQNEKSQIQNKASAMRVLQAK 290
>gi|403252111|ref|ZP_10918424.1| protein chain release factor B [actinobacterium SCGC AAA027-L06]
gi|402914638|gb|EJX35648.1| protein chain release factor B [actinobacterium SCGC AAA027-L06]
Length = 368
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 40/59 (67%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELL 110
+I+EKD++ R SGPGGQ V T++ V +TH+P+GIV+ C RS +NR TA +L
Sbjct: 233 EIEEKDLRVDVYRSSGPGGQGVNTTDSAVRITHLPSGIVVSCQNERSQIQNRATAMAVL 291
>gi|213964464|ref|ZP_03392664.1| peptide chain release factor 1 [Corynebacterium amycolatum SK46]
gi|213952657|gb|EEB64039.1| peptide chain release factor 1 [Corynebacterium amycolatum SK46]
Length = 357
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 52/91 (57%), Gaps = 6/91 (6%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
+IDEKD++ R SG GGQ V T++ V LTH+PTG+V+ C + RS +N+ A ++L
Sbjct: 217 QIDEKDLRVDVYRSSGKGGQGVNTTDSAVRLTHLPTGLVVTCQKERSQIQNKARAMQVLA 276
Query: 112 A------QWDVQVNGEDSLNAQIRRIDEKRR 136
A + ++ D +Q+R +D R
Sbjct: 277 ARLQQMKEEEIAEAASDQRKSQVRNMDRSER 307
>gi|297172687|gb|ADI23654.1| protein chain release factor B [uncultured Gemmatimonadales
bacterium HF4000_15H13]
Length = 328
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 43/61 (70%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
+I++ D++ R SG GGQ V KT++ V LTH PTGIV++C Q RS +NR TA ++L+
Sbjct: 193 EINDDDLRVDTYRASGAGGQHVNKTDSAVRLTHAPTGIVVQCQQERSQHKNRATAMKMLL 252
Query: 112 A 112
A
Sbjct: 253 A 253
>gi|258651861|ref|YP_003201017.1| peptide chain release factor 2 [Nakamurella multipartita DSM 44233]
gi|258555086|gb|ACV78028.1| peptide chain release factor 2 [Nakamurella multipartita DSM 44233]
Length = 369
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 39/58 (67%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELL 110
+DEKD++ R SGPGGQ V T++ V +TH+PTGIV+ C RS +N+ +A +L
Sbjct: 230 VDEKDLRVDVYRSSGPGGQGVNTTDSAVRITHLPTGIVVSCQNERSQIQNKASAMAVL 287
>gi|376295313|ref|YP_005166543.1| Peptide chain release factor 2 [Desulfovibrio desulfuricans ND132]
gi|323457874|gb|EGB13739.1| Peptide chain release factor 2 [Desulfovibrio desulfuricans ND132]
Length = 372
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 71/142 (50%), Gaps = 25/142 (17%)
Query: 14 NLAGIRLLESQVTITRELR-----NDGYHRNLVSNIDIYSTIPKIDE--------KDIQE 60
L LL+ + + R +R + G +++D+Y P +DE +D++
Sbjct: 185 GLFAYGLLKGETGVHRLIRISPFDSSGRRHTSFASVDVY---PDMDENIEIEVKDEDLRI 241
Query: 61 RFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVAQWDVQVNG 120
R SGPGGQ+V KT++ V +THIPTGIV +C +S N+ TA L+ A+
Sbjct: 242 DTFRSSGPGGQSVNKTSSAVRITHIPTGIVAQCQNEKSQHRNKATALRLVKARL------ 295
Query: 121 EDSLNAQIRRIDEKRRATQEQK 142
++++I+E RR + K
Sbjct: 296 ---YERELKKIEESRRQDYQAK 314
>gi|297562654|ref|YP_003681628.1| peptide chain release factor 2 [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
gi|296847102|gb|ADH69122.1| peptide chain release factor 2 [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
Length = 372
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 41/62 (66%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
+ID+ D++ R SGPGGQ V T++ V +TH+PTGIV+ C RS +N+ TA +L
Sbjct: 232 EIDDGDLRVDVYRSSGPGGQGVNTTDSAVRITHLPTGIVVSCQNERSQLQNKATAMSMLQ 291
Query: 112 AQ 113
A+
Sbjct: 292 AK 293
>gi|357590811|ref|ZP_09129477.1| peptide chain release factor 2 [Corynebacterium nuruki S6-4]
Length = 374
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 49/88 (55%), Gaps = 5/88 (5%)
Query: 31 LRNDGYHRNLVSNIDIYSTIPKIDEKDIQERFVR-----GSGPGGQAVAKTNNCVVLTHI 85
N G + + +++ + + D DI E VR SGPGGQ+V T++ V LTHI
Sbjct: 208 FDNQGRRQTSFAEVEVLPVVEQSDHVDIDENEVRVDVYRSSGPGGQSVNTTDSAVRLTHI 267
Query: 86 PTGIVIKCHQSRSLSENRKTARELLVAQ 113
PTGIV+ C +S +N+ +A +L A+
Sbjct: 268 PTGIVVTCQNEKSQIQNKASAMRVLAAK 295
>gi|295398527|ref|ZP_06808561.1| peptide chain release factor RF2 [Aerococcus viridans ATCC 11563]
gi|294973250|gb|EFG49043.1| peptide chain release factor RF2 [Aerococcus viridans ATCC 11563]
Length = 353
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 41/62 (66%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
+IDE DI+ R SG GGQ + KT++ V LTH+PTGIV+ RS +NR TA ++L
Sbjct: 216 EIDESDIEMDVFRASGAGGQHINKTSSAVRLTHVPTGIVVASQGQRSQFQNRDTAMKMLQ 275
Query: 112 AQ 113
A+
Sbjct: 276 AK 277
>gi|310822818|ref|YP_003955176.1| peptide chain release factor 2 [Stigmatella aurantiaca DW4/3-1]
gi|309395890|gb|ADO73349.1| Peptide chain release factor 2 [Stigmatella aurantiaca DW4/3-1]
Length = 380
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 69/133 (51%), Gaps = 19/133 (14%)
Query: 21 LESQVTITRELRNDGYHRNL-----VSNIDIYSTIPK-----IDEKDIQERFVRGSGPGG 70
L+++V + R +R + N +++D+Y + I EKD + +F+RG G GG
Sbjct: 197 LKAEVGVHRLVRISPFDANARRQTAFASVDVYPEVDDSIRIDIPEKDYELKFIRGGGAGG 256
Query: 71 QAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVAQWDVQVNGEDSLNAQIRR 130
Q V KT++ L H+PT I+I C RS S N+ A ++L A+ ++++
Sbjct: 257 QKVNKTSSTAQLRHLPTNILITCQTERSQSANKDMAFKILRARL---------YELELKK 307
Query: 131 IDEKRRATQEQKK 143
+ +R A + QKK
Sbjct: 308 REAERDAAEAQKK 320
>gi|295836903|ref|ZP_06823836.1| peptide chain release factor 2 [Streptomyces sp. SPB74]
gi|295826265|gb|EFG64762.1| peptide chain release factor 2 [Streptomyces sp. SPB74]
Length = 371
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 41/62 (66%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
+IDE +++ R SGPGGQ V T++ V LTH+PTGIV+ C RS +N+ TA +L
Sbjct: 232 EIDESELRVDVYRSSGPGGQGVNTTDSAVRLTHLPTGIVVSCQNERSQIQNKATAMNVLQ 291
Query: 112 AQ 113
A+
Sbjct: 292 AK 293
>gi|302524557|ref|ZP_07276899.1| peptide chain release factor 2 [Streptomyces sp. AA4]
gi|302433452|gb|EFL05268.1| peptide chain release factor 2 [Streptomyces sp. AA4]
Length = 376
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 40/60 (66%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
I EKDI+ R SGPGGQ+V T++ V LTHIPTGIV+ C +S +N+ A ++L A
Sbjct: 241 IPEKDIRVDVYRSSGPGGQSVNTTDSAVRLTHIPTGIVVSCQNEKSQLQNKAAAMKVLQA 300
>gi|308481019|ref|XP_003102715.1| hypothetical protein CRE_29955 [Caenorhabditis remanei]
gi|308260801|gb|EFP04754.1| hypothetical protein CRE_29955 [Caenorhabditis remanei]
Length = 162
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 51/94 (54%), Gaps = 14/94 (14%)
Query: 50 IPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIK--------------CHQ 95
P++ ++D +++++ G GPGGQ V N V LTH+PTG V+K H+
Sbjct: 24 FPEVRKEDCEQKYISGWGPGGQKVNTAQNAVQLTHLPTGTVLKVLRFFFTISFNFHQVHE 83
Query: 96 SRSLSENRKTARELLVAQWDVQVNGEDSLNAQIR 129
SR L +N + A E + D Q+NGE+ Q++
Sbjct: 84 SRLLPKNIEIAFERMKFVLDRQINGENCYEEQLK 117
>gi|366992948|ref|XP_003676239.1| hypothetical protein NCAS_0D02970 [Naumovozyma castellii CBS 4309]
gi|342302105|emb|CCC69878.1| hypothetical protein NCAS_0D02970 [Naumovozyma castellii CBS 4309]
Length = 156
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 60/105 (57%), Gaps = 9/105 (8%)
Query: 55 EKDIQERFVRGS-GPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVAQ 113
E +I+E+F+ G G GGQ + K N+ V L H+PTGI++ C ++RS +NRK AR+ L
Sbjct: 30 EDEIEEKFLHGGRGAGGQKINKCNSKVQLKHVPTGIIVSCQETRSRDQNRKLARDKLALA 89
Query: 114 WDVQVNGEDSLN--------AQIRRIDEKRRATQEQKKRKLDALK 150
+ +G S N A R +++R+ + + + K D++K
Sbjct: 90 LERHKSGGTSSNWVPTVREAALNERARQQKRSKERKSRAKYDSVK 134
>gi|291453772|ref|ZP_06593162.1| peptide chain release factor 2 [Streptomyces albus J1074]
gi|359149446|ref|ZP_09182456.1| peptide chain release factor 2 [Streptomyces sp. S4]
gi|421740172|ref|ZP_16178444.1| bacterial peptide chain release factor 2 (bRF-2) [Streptomyces sp.
SM8]
gi|291356721|gb|EFE83623.1| peptide chain release factor 2 [Streptomyces albus J1074]
gi|406691412|gb|EKC95161.1| bacterial peptide chain release factor 2 (bRF-2) [Streptomyces sp.
SM8]
Length = 371
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 64/123 (52%), Gaps = 25/123 (20%)
Query: 33 NDGYHRNLVSNIDIYSTIPK-----IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 87
N G + + +++ + + IDE +++ R SGPGGQ V T++ V LTH+PT
Sbjct: 208 NQGRRQTSFAGVEVLPVVEQTDHIEIDESELRVDVYRSSGPGGQGVNTTDSAVRLTHLPT 267
Query: 88 GIVIKCHQSRSLSENRKTARELLVAQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKLD 147
GIV+ C RS +N+ +A +L A ++ E+RR ++++ K+D
Sbjct: 268 GIVVSCQNERSQIQNKASAMNVLQA-----------------KLLERRR---QEEQAKMD 307
Query: 148 ALK 150
ALK
Sbjct: 308 ALK 310
>gi|262203335|ref|YP_003274543.1| peptide chain release factor 2 [Gordonia bronchialis DSM 43247]
gi|262086682|gb|ACY22650.1| peptide chain release factor 2 [Gordonia bronchialis DSM 43247]
Length = 371
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 41/61 (67%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
IDE D++ R SGPGGQ+V T++ V LTH+PTGIV+ C +S +N+ +A +L A
Sbjct: 235 IDENDVKVDVYRSSGPGGQSVNTTDSAVRLTHLPTGIVVTCQNEKSQLQNKASAMRVLQA 294
Query: 113 Q 113
+
Sbjct: 295 K 295
>gi|357632575|ref|ZP_09130453.1| Peptide chain release factor 2 [Desulfovibrio sp. FW1012B]
gi|357581129|gb|EHJ46462.1| Peptide chain release factor 2 [Desulfovibrio sp. FW1012B]
Length = 366
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 65/110 (59%), Gaps = 11/110 (10%)
Query: 20 LLESQVTITRELR-----NDGYHRNLVSNIDIYSTIP-----KIDEKDIQERFVRGSGPG 69
LL+++ I R +R + G +++D+Y + E+D++ R SGPG
Sbjct: 190 LLDAEKGIHRLIRISPFDSSGRRHTSFASVDVYPDAGLDIDIDVKEEDLRVDVFRASGPG 249
Query: 70 GQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVAQ-WDVQV 118
GQ V KT++ + +TH+PTGIV++C +S NR++A ++L A+ +D+++
Sbjct: 250 GQHVNKTSSAIRITHLPTGIVVQCQNEKSQHRNRESAMKVLKARLYDLEL 299
>gi|300781422|ref|ZP_07091276.1| peptide chain release factor RF1 [Corynebacterium genitalium ATCC
33030]
gi|300533129|gb|EFK54190.1| peptide chain release factor RF1 [Corynebacterium genitalium ATCC
33030]
Length = 360
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 42/63 (66%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
IDEKD++ R SG GGQ V T++ V +TH+PTGIV+ C + RS +NR A ++L A
Sbjct: 220 IDEKDLRVDVYRSSGKGGQGVNTTDSAVRITHLPTGIVVTCQKERSQIQNRARAMQVLQA 279
Query: 113 QWD 115
+ D
Sbjct: 280 RLD 282
>gi|68535523|ref|YP_250228.1| peptide chain release factor 2 [Corynebacterium jeikeium K411]
gi|260579727|ref|ZP_05847586.1| peptide chain release factor 2 [Corynebacterium jeikeium ATCC
43734]
gi|68263122|emb|CAI36610.1| peptide chain release factor RF-2 [Corynebacterium jeikeium K411]
gi|258602157|gb|EEW15475.1| peptide chain release factor 2 [Corynebacterium jeikeium ATCC
43734]
Length = 377
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 41/61 (67%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
IDE D++ R SGPGGQ+V T++ V LTH+PTGIV+ C +S +N+ +A +L A
Sbjct: 238 IDENDVRVDVYRSSGPGGQSVNTTDSAVRLTHVPTGIVVTCQNEKSQIQNKASAMRVLQA 297
Query: 113 Q 113
+
Sbjct: 298 K 298
>gi|335041017|ref|ZP_08534135.1| Peptide chain release factor 1 [Caldalkalibacillus thermarum
TA2.A1]
gi|334179167|gb|EGL81814.1| Peptide chain release factor 1 [Caldalkalibacillus thermarum
TA2.A1]
Length = 356
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 50/80 (62%), Gaps = 1/80 (1%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
+IDEKDI+ SGPGGQ+V T + V LTHIPTGIV+ C +S +N++ A ++L
Sbjct: 214 EIDEKDIRVDVFCSSGPGGQSVNTTQSAVRLTHIPTGIVVSCQDEKSQHKNKEKAMKILR 273
Query: 112 AQ-WDVQVNGEDSLNAQIRR 130
A+ +D + + A IR+
Sbjct: 274 ARVYDKYLQEAQNEYASIRK 293
>gi|298528152|ref|ZP_07015556.1| hypothetical protein Dthio_PD3135 [Desulfonatronospira
thiodismutans ASO3-1]
gi|298511804|gb|EFI35706.1| hypothetical protein Dthio_PD3135 [Desulfonatronospira
thiodismutans ASO3-1]
Length = 368
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 59/104 (56%), Gaps = 10/104 (9%)
Query: 20 LLESQVTITRELR-----NDGYHRNLVSNIDIYSTIP-----KIDEKDIQERFVRGSGPG 69
LL+S+ I R +R G +++D+Y + ++ E+D++ + SGPG
Sbjct: 192 LLKSERGIHRLIRISPFDASGRRHTSFASVDVYPQVSDDINIEVKEEDMRVDVFKASGPG 251
Query: 70 GQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVAQ 113
GQ V KT++ + +TH+PTGIV++C RS NR A ++L A+
Sbjct: 252 GQHVNKTSSAIRITHMPTGIVVQCQSERSQRRNRDAALKILKAK 295
>gi|452851241|ref|YP_007492925.1| Peptide chain release factor 2 (fragment) [Desulfovibrio
piezophilus]
gi|451894895|emb|CCH47774.1| Peptide chain release factor 2 (fragment) [Desulfovibrio
piezophilus]
Length = 303
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 72/140 (51%), Gaps = 19/140 (13%)
Query: 14 NLAGIRLLESQVTITRELR-----NDGYHRNLVSNIDIYSTIP-----KIDEKDIQERFV 63
L LL+ + + R +R + G +++D+Y + ++ ++D++
Sbjct: 117 GLYAYGLLKGEAGVHRLIRISPFDSSGRRHTSFASVDVYPDMDDDIEIEVKDEDLRIDTF 176
Query: 64 RGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVAQWDVQVNGEDS 123
R SGPGGQ+V KT++ V +TH+PTGIV +C +S N+ TA L+ A+
Sbjct: 177 RSSGPGGQSVNKTSSAVRITHLPTGIVAQCQNEKSQHRNKATALRLVKARL--------- 227
Query: 124 LNAQIRRIDEKRRATQEQKK 143
++++I++ RR E K+
Sbjct: 228 YELELKKIEDSRRQEYESKE 247
>gi|448823366|ref|YP_007416531.1| peptide chain release factor RF-1 [Corynebacterium urealyticum DSM
7111]
gi|448276863|gb|AGE36287.1| peptide chain release factor RF-1 [Corynebacterium urealyticum DSM
7111]
Length = 371
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 41/61 (67%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
+IDEKDI+ R SG GGQ V T++ V +TH+PTG+V+ C + RS +NR A ++L
Sbjct: 230 EIDEKDIRVDVYRSSGKGGQGVNTTDSAVRITHLPTGVVVTCQKERSQIQNRARAMQVLA 289
Query: 112 A 112
A
Sbjct: 290 A 290
>gi|410866577|ref|YP_006981188.1| Peptide chain release factor 2 [Propionibacterium acidipropionici
ATCC 4875]
gi|410823218|gb|AFV89833.1| Peptide chain release factor 2 [Propionibacterium acidipropionici
ATCC 4875]
Length = 368
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 59/126 (46%), Gaps = 22/126 (17%)
Query: 33 NDGYHRNLVSNIDIYSTIPKIDEKDIQERFVR-----GSGPGGQAVAKTNNCVVLTHIPT 87
N G + + +++ + + D DI E +R SGPGGQ V T++ V LTH+PT
Sbjct: 208 NQGRRQTSFAGVEVLPVVEETDHVDIPEADLRVDVFHASGPGGQGVNTTDSAVRLTHLPT 267
Query: 88 GIVIKCHQSRSLSENRKTARELLVAQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKLD 147
GIV+ C RS +N+ A +L A ++ EK RA QE + L
Sbjct: 268 GIVVSCQNERSQIQNKAAALRVLQA-----------------KLLEKARAEQEAEMNSLK 310
Query: 148 ALKKAW 153
+ +W
Sbjct: 311 SEGNSW 316
>gi|418070392|ref|ZP_12707667.1| peptide chain release factor 1 [Lactobacillus rhamnosus R0011]
gi|357539812|gb|EHJ23829.1| peptide chain release factor 1 [Lactobacillus rhamnosus R0011]
Length = 359
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 38/59 (64%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELL 110
KID KDI+ R SG GGQ V KT++ V +THIPTGIV+ RS ENR A ++L
Sbjct: 217 KIDPKDIRTDVYRSSGAGGQHVNKTSSAVRMTHIPTGIVVSMQDERSQQENRARAMQIL 275
>gi|257459323|ref|ZP_05624436.1| peptide chain release factor 2 [Campylobacter gracilis RM3268]
gi|257443252|gb|EEV18382.1| peptide chain release factor 2 [Campylobacter gracilis RM3268]
Length = 365
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 40/58 (68%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELL 110
I+EKDI+ R SG GGQ + KT + V +THIPTGIV+ C RS +N++TA ++L
Sbjct: 233 IEEKDIRVDVFRASGAGGQHINKTESAVRITHIPTGIVVNCQNDRSQHKNKETAMKVL 290
>gi|357399593|ref|YP_004911518.1| Peptide chain release factor 2 [Streptomyces cattleya NRRL 8057 =
DSM 46488]
gi|386355632|ref|YP_006053878.1| peptide chain release factor 2 [Streptomyces cattleya NRRL 8057 =
DSM 46488]
gi|337766002|emb|CCB74713.1| Peptide chain release factor 2 [Streptomyces cattleya NRRL 8057 =
DSM 46488]
gi|365806140|gb|AEW94356.1| peptide chain release factor 2 [Streptomyces cattleya NRRL 8057 =
DSM 46488]
Length = 368
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 56/99 (56%), Gaps = 20/99 (20%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
+IDE +++ R SGPGGQ V T++ V +TH+PTGIV+ C RS +NR +A +L
Sbjct: 232 EIDESELRIDVYRSSGPGGQGVNTTDSAVRITHLPTGIVVSCQNERSQIQNRASAMNVLQ 291
Query: 112 AQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKLDALK 150
A ++ E+RR ++++ K+DALK
Sbjct: 292 A-----------------KLLERRR---QEEQAKMDALK 310
>gi|172040385|ref|YP_001800099.1| peptide chain release factor 1 [Corynebacterium urealyticum DSM
7109]
gi|171851689|emb|CAQ04665.1| peptide chain release factor RF-1 [Corynebacterium urealyticum DSM
7109]
Length = 371
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 41/61 (67%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
+IDEKDI+ R SG GGQ V T++ V +TH+PTG+V+ C + RS +NR A ++L
Sbjct: 230 EIDEKDIRVDVYRSSGKGGQGVNTTDSAVRITHLPTGVVVTCQKERSQIQNRARAMQVLA 289
Query: 112 A 112
A
Sbjct: 290 A 290
>gi|163750755|ref|ZP_02157990.1| peptide chain release factor 1 [Shewanella benthica KT99]
gi|161329450|gb|EDQ00444.1| peptide chain release factor 1 [Shewanella benthica KT99]
Length = 361
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 54/96 (56%), Gaps = 15/96 (15%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
KI+ D++ R SG GGQ V KT++ + LTHIP+GIV++C RS +NR A +L
Sbjct: 218 KINPADLKVDTFRASGAGGQHVNKTDSAIRLTHIPSGIVVECQDQRSQHKNRAQAMSVLT 277
Query: 112 AQWDVQVNGEDSLNAQIRRI-DEKRRATQEQKKRKL 146
A+I+ + DEKRR+ +E +R L
Sbjct: 278 --------------ARIQAVEDEKRRSVEETTRRNL 299
>gi|199597587|ref|ZP_03211016.1| Protein chain release factor A [Lactobacillus rhamnosus HN001]
gi|258508166|ref|YP_003170917.1| peptide chain release factor 1 [Lactobacillus rhamnosus GG]
gi|258539381|ref|YP_003173880.1| peptide chain release factor 1 [Lactobacillus rhamnosus Lc 705]
gi|385827838|ref|YP_005865610.1| peptide chain release factor [Lactobacillus rhamnosus GG]
gi|385835027|ref|YP_005872801.1| peptide chain release factor 1 [Lactobacillus rhamnosus ATCC 8530]
gi|199591610|gb|EDY99687.1| Protein chain release factor A [Lactobacillus rhamnosus HN001]
gi|257148093|emb|CAR87066.1| Peptide chain release factor 1 [Lactobacillus rhamnosus GG]
gi|257151057|emb|CAR90029.1| Peptide chain release factor 1 [Lactobacillus rhamnosus Lc 705]
gi|259649483|dbj|BAI41645.1| peptide chain release factor [Lactobacillus rhamnosus GG]
gi|355394518|gb|AER63948.1| peptide chain release factor 1 [Lactobacillus rhamnosus ATCC 8530]
Length = 359
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 38/59 (64%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELL 110
KID KDI+ R SG GGQ V KT++ V +THIPTGIV+ RS ENR A ++L
Sbjct: 217 KIDPKDIRTDVYRSSGAGGQHVNKTSSAVRMTHIPTGIVVSMQDERSQQENRARAMQIL 275
>gi|453077037|ref|ZP_21979799.1| peptide chain release factor 2 [Rhodococcus triatomae BKS 15-14]
gi|452760158|gb|EME18500.1| peptide chain release factor 2 [Rhodococcus triatomae BKS 15-14]
Length = 367
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 41/61 (67%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
IDE D++ R SGPGGQ+V T++ V LTHIPTGIV+ C +S +N+ +A +L A
Sbjct: 231 IDENDVRVDVYRSSGPGGQSVNTTDSAVRLTHIPTGIVVTCQNEKSQLQNKVSAMRVLQA 290
Query: 113 Q 113
+
Sbjct: 291 K 291
>gi|421769637|ref|ZP_16206343.1| Peptide chain release factor 1 [Lactobacillus rhamnosus LRHMDP2]
gi|421771458|ref|ZP_16208118.1| Peptide chain release factor 1 [Lactobacillus rhamnosus LRHMDP3]
gi|411184142|gb|EKS51276.1| Peptide chain release factor 1 [Lactobacillus rhamnosus LRHMDP2]
gi|411186044|gb|EKS53170.1| Peptide chain release factor 1 [Lactobacillus rhamnosus LRHMDP3]
Length = 386
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 38/59 (64%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELL 110
KID KDI+ R SG GGQ V KT++ V +THIPTGIV+ RS ENR A ++L
Sbjct: 244 KIDPKDIRTDVYRSSGAGGQHVNKTSSAVRMTHIPTGIVVSMQDERSQQENRARAMQIL 302
>gi|182414215|ref|YP_001819281.1| class I peptide chain release factor [Opitutus terrae PB90-1]
gi|177841429|gb|ACB75681.1| Class I peptide chain release factor [Opitutus terrae PB90-1]
Length = 131
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 48/75 (64%), Gaps = 10/75 (13%)
Query: 56 KDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVAQWD 115
+++ ERFVRGSGPGGQ + KT++ V L H PTG+ ++C RS + NR+ VA W+
Sbjct: 19 EEVDERFVRGSGPGGQKINKTSSTVWLRHGPTGVEVRCQAERSQAANRE------VAWWE 72
Query: 116 VQVNGEDSLNAQIRR 130
+ + L A++RR
Sbjct: 73 LC----EKLEARVRR 83
>gi|429194272|ref|ZP_19186373.1| peptide chain release factor 2 [Streptomyces ipomoeae 91-03]
gi|428670028|gb|EKX68950.1| peptide chain release factor 2 [Streptomyces ipomoeae 91-03]
Length = 368
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 56/99 (56%), Gaps = 20/99 (20%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
+IDE +++ R SGPGGQ V T++ V +TH+PTGIV+ C RS +N+ TA +L
Sbjct: 232 EIDESELRIDVYRSSGPGGQGVNTTDSAVRITHLPTGIVVSCQNERSQIQNKATAMNVLQ 291
Query: 112 AQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKLDALK 150
A ++ E+RR ++++ K+DALK
Sbjct: 292 A-----------------KLLERRR---QEEQAKMDALK 310
>gi|29831645|ref|NP_826279.1| peptide chain release factor 2 [Streptomyces avermitilis MA-4680]
gi|81717933|sp|Q82D82.1|RF2_STRAW RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|29608761|dbj|BAC72814.1| putative peptide chain release factor 2 [Streptomyces avermitilis
MA-4680]
Length = 368
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 63/123 (51%), Gaps = 25/123 (20%)
Query: 33 NDGYHRNLVSNIDIYSTIP-----KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 87
N G + + ++I + +IDE +++ R SGPGGQ V T++ V LTH+PT
Sbjct: 208 NQGRRQTSFAGVEILPVVETTDHIEIDESELRVDVYRSSGPGGQGVNTTDSAVRLTHLPT 267
Query: 88 GIVIKCHQSRSLSENRKTARELLVAQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKLD 147
GIV+ C RS +N+ +A +L Q + +D +R ++++ K+D
Sbjct: 268 GIVVSCQNERSQIQNKASAMNVL----------------QAKLLDRRR----QEEQAKMD 307
Query: 148 ALK 150
ALK
Sbjct: 308 ALK 310
>gi|359420531|ref|ZP_09212466.1| peptide chain release factor 2 [Gordonia araii NBRC 100433]
gi|358243528|dbj|GAB10535.1| peptide chain release factor 2 [Gordonia araii NBRC 100433]
Length = 374
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 41/61 (67%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
IDE D++ R SGPGGQ+V T++ V LTH+PTGIV+ C +S +N+ +A +L A
Sbjct: 235 IDENDLKVDVYRSSGPGGQSVNTTDSAVRLTHLPTGIVVTCQNEKSQLQNKASAMRVLQA 294
Query: 113 Q 113
+
Sbjct: 295 K 295
>gi|116620705|ref|YP_822861.1| peptide chain release factor 2 [Candidatus Solibacter usitatus
Ellin6076]
gi|116223867|gb|ABJ82576.1| bacterial peptide chain release factor 2 (bRF-2) [Candidatus
Solibacter usitatus Ellin6076]
Length = 322
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/120 (35%), Positives = 64/120 (53%), Gaps = 12/120 (10%)
Query: 3 IKIVMWPMRDRNLAGIRLLESQVTITRELRNDGYHRNLVSNIDIYSTI--PKIDEK---D 57
IK V + + N G LL+S++ + R +R + N + S P++D++ D
Sbjct: 118 IKSVTFEVNGENAYG--LLQSEIGVHRLVRISPFDANARRHTSFASVFVFPQVDDEIKID 175
Query: 58 IQER-----FVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
IQ++ R SG GGQ V T++ V +TH PTGIV++C RS +NR TA + L A
Sbjct: 176 IQDKDLRIDTFRASGAGGQHVNMTDSAVRITHFPTGIVVQCQNERSQHKNRATAMKQLRA 235
>gi|423080184|ref|ZP_17068815.1| peptide chain release factor 1, partial [Lactobacillus rhamnosus
ATCC 21052]
gi|357543845|gb|EHJ25858.1| peptide chain release factor 1, partial [Lactobacillus rhamnosus
ATCC 21052]
Length = 381
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 38/59 (64%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELL 110
KID KDI+ R SG GGQ V KT++ V +THIPTGIV+ RS ENR A ++L
Sbjct: 239 KIDPKDIRTDVYRSSGAGGQHVNKTSSAVRMTHIPTGIVVSMQDERSQQENRARAMQIL 297
>gi|153874211|ref|ZP_02002515.1| Peptide chain release factor 1 [Beggiatoa sp. PS]
gi|152069325|gb|EDN67485.1| Peptide chain release factor 1 [Beggiatoa sp. PS]
Length = 361
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 38/56 (67%)
Query: 57 DIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
DI+E R SG GGQ V KT++ + LTH+PTGIVI+C RS +NR A+ LL A
Sbjct: 223 DIREDTFRASGAGGQHVNKTDSAIRLTHLPTGIVIECQDERSQHKNRARAKSLLQA 278
>gi|342218161|ref|ZP_08710786.1| peptide chain release factor 1 [Megasphaera sp. UPII 135-E]
gi|341590869|gb|EGS34095.1| peptide chain release factor 1 [Megasphaera sp. UPII 135-E]
Length = 360
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 40/60 (66%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
+D KD++ + R SG GGQ V KT++ V +THIPTGIV++C RS ENR A +L A
Sbjct: 218 LDMKDVRIDYFRASGAGGQHVNKTSSAVRMTHIPTGIVVECQDERSQLENRAKALRVLKA 277
>gi|229551967|ref|ZP_04440692.1| peptide chain release factor RF1 [Lactobacillus rhamnosus LMS2-1]
gi|229314702|gb|EEN80675.1| peptide chain release factor RF1 [Lactobacillus rhamnosus LMS2-1]
Length = 386
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 38/59 (64%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELL 110
KID KDI+ R SG GGQ V KT++ V +THIPTGIV+ RS ENR A ++L
Sbjct: 244 KIDPKDIRTDVYRSSGAGGQHVNKTSSAVRMTHIPTGIVVSMQDERSQQENRARAMQIL 302
>gi|407277743|ref|ZP_11106213.1| peptide chain release factor 2 [Rhodococcus sp. P14]
Length = 374
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 41/61 (67%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
+DE DI+ R SGPGGQ+V T++ V LTHIPTGIV+ C +S +N+ +A +L A
Sbjct: 235 VDENDIRVDVYRSSGPGGQSVNTTDSAVRLTHIPTGIVVTCQNEKSQLQNKVSAMRVLQA 294
Query: 113 Q 113
+
Sbjct: 295 K 295
>gi|403508387|ref|YP_006640025.1| peptide chain release factor 2 [Nocardiopsis alba ATCC BAA-2165]
gi|402801847|gb|AFR09257.1| peptide chain release factor 2 [Nocardiopsis alba ATCC BAA-2165]
Length = 370
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 41/62 (66%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
+IDE +++ R SGPGGQ V T++ V +TH+PTGIV+ C RS +N+ TA +L
Sbjct: 232 EIDETELRVDVYRSSGPGGQGVNTTDSAVRITHMPTGIVVSCQNERSQLQNKATAMSMLQ 291
Query: 112 AQ 113
A+
Sbjct: 292 AK 293
>gi|386840528|ref|YP_006245586.1| peptide chain release factor 2 [Streptomyces hygroscopicus subsp.
jinggangensis 5008]
gi|374100829|gb|AEY89713.1| peptide chain release factor 2 [Streptomyces hygroscopicus subsp.
jinggangensis 5008]
gi|451793821|gb|AGF63870.1| peptide chain release factor 2 [Streptomyces hygroscopicus subsp.
jinggangensis TL01]
Length = 368
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 56/99 (56%), Gaps = 20/99 (20%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
+IDE +++ R SGPGGQ V T++ V +TH+PTGIV+ C RS +N+ TA +L
Sbjct: 232 EIDESELRIDVYRSSGPGGQGVNTTDSAVRITHLPTGIVVSCQNERSQIQNKATAMNVLQ 291
Query: 112 AQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKLDALK 150
A ++ E+RR ++++ K+DALK
Sbjct: 292 A-----------------KLLERRR---QEEQAKMDALK 310
>gi|374308692|ref|YP_005055123.1| peptide chain release factor 2 [Filifactor alocis ATCC 35896]
gi|291167022|gb|EFE29068.1| peptide chain release factor 2 [Filifactor alocis ATCC 35896]
Length = 338
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 40/61 (65%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
ID D++ R SG GGQ V KT++ V +THIPTGIVI C RS NR+TA ++L +
Sbjct: 203 IDTNDLKIDTYRASGAGGQHVNKTDSAVRITHIPTGIVITCQNERSQHSNRETAMKMLFS 262
Query: 113 Q 113
+
Sbjct: 263 K 263
>gi|256380143|ref|YP_003103803.1| peptide chain release factor 1 [Actinosynnema mirum DSM 43827]
gi|255924446|gb|ACU39957.1| peptide chain release factor 1 [Actinosynnema mirum DSM 43827]
Length = 354
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 52/91 (57%), Gaps = 6/91 (6%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELL- 110
+ID+KD++ R SG GGQ+V T++ V +TH+PTGIV+ C RS +N+ A ++L
Sbjct: 214 EIDDKDLRVDVFRSSGKGGQSVNTTDSAVRITHLPTGIVVSCQNERSQLQNKARAMQVLQ 273
Query: 111 -----VAQWDVQVNGEDSLNAQIRRIDEKRR 136
+A+ Q D+ Q+R +D R
Sbjct: 274 ARLQALAEEKAQQEASDARRTQVRTVDRSER 304
>gi|366086231|ref|ZP_09452716.1| peptide chain release factor 1 [Lactobacillus zeae KCTC 3804]
Length = 359
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 38/59 (64%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELL 110
KID KDI+ R SG GGQ V KT++ V +THIPTGIV+ RS ENR A ++L
Sbjct: 217 KIDPKDIRTDVYRSSGAGGQHVNKTSSAVRMTHIPTGIVVSMQDERSQQENRARALQIL 275
>gi|433609099|ref|YP_007041468.1| Peptide chain release factor 1 [Saccharothrix espanaensis DSM
44229]
gi|407886952|emb|CCH34595.1| Peptide chain release factor 1 [Saccharothrix espanaensis DSM
44229]
Length = 455
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 51/91 (56%), Gaps = 6/91 (6%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELL- 110
+IDE D++ R SG GGQ+V T++ V +TH+PTGIV+ C RS +N+ A ++L
Sbjct: 315 EIDENDLRVDVFRSSGKGGQSVNTTDSAVRITHLPTGIVVSCQNERSQLQNKARAMQVLQ 374
Query: 111 -----VAQWDVQVNGEDSLNAQIRRIDEKRR 136
+A+ Q D+ QIR +D R
Sbjct: 375 SRLQVLAEEKAQQEASDARRTQIRTVDRSER 405
>gi|308271179|emb|CBX27788.1| Peptide chain release factor 2 [uncultured Desulfobacterium sp.]
Length = 344
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 40/58 (68%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELL 110
IDEKD++ R SG GGQ V KT++ + +TH+PTGIV++C Q RS +N+ A +L
Sbjct: 211 IDEKDLRIDIFRSSGAGGQHVNKTSSAIRITHLPTGIVVQCQQERSQHKNKDMAMSVL 268
>gi|367002890|ref|XP_003686179.1| hypothetical protein TPHA_0F02650 [Tetrapisispora phaffii CBS 4417]
gi|357524479|emb|CCE63745.1| hypothetical protein TPHA_0F02650 [Tetrapisispora phaffii CBS 4417]
Length = 168
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 40/62 (64%), Gaps = 1/62 (1%)
Query: 55 EKDIQERFVRGS-GPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVAQ 113
E + E F+ G GPGGQ + K N+ V L H+PTG+V+ C ++RS +NRK ARE L +
Sbjct: 37 ENECVEAFMHGGRGPGGQKINKCNSKVQLKHLPTGVVVSCQETRSREQNRKIAREKLALE 96
Query: 114 WD 115
D
Sbjct: 97 LD 98
>gi|441516620|ref|ZP_20998368.1| peptide chain release factor 2 [Gordonia hirsuta DSM 44140 = NBRC
16056]
gi|441456673|dbj|GAC56329.1| peptide chain release factor 2 [Gordonia hirsuta DSM 44140 = NBRC
16056]
Length = 372
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 41/61 (67%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
IDE +++ R SGPGGQ+V T++ V LTHIPTGIV+ C +S +N+ +A +L A
Sbjct: 235 IDENEVKVDVYRSSGPGGQSVNTTDSAVRLTHIPTGIVVTCQNEKSQLQNKVSAMRVLAA 294
Query: 113 Q 113
+
Sbjct: 295 K 295
>gi|365990351|ref|XP_003672005.1| hypothetical protein NDAI_0I01930 [Naumovozyma dairenensis CBS 421]
gi|343770779|emb|CCD26762.1| hypothetical protein NDAI_0I01930 [Naumovozyma dairenensis CBS 421]
Length = 185
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 42/62 (67%), Gaps = 1/62 (1%)
Query: 55 EKDIQERFVRGS-GPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVAQ 113
EK+ +E+F+ G GPGGQ + K N+ V L H+PTG+ I C ++RS +NRK ARE + +
Sbjct: 35 EKECEEKFMHGGRGPGGQKINKCNSKVQLRHMPTGLSISCQETRSREQNRKIAREKMALE 94
Query: 114 WD 115
+
Sbjct: 95 LE 96
>gi|297200074|ref|ZP_06917471.1| peptide chain release factor 2 [Streptomyces sviceus ATCC 29083]
gi|297147562|gb|EDY54581.2| peptide chain release factor 2 [Streptomyces sviceus ATCC 29083]
Length = 368
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 49/86 (56%), Gaps = 5/86 (5%)
Query: 33 NDGYHRNLVSNIDIYSTIPK-----IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 87
N G + + ++I + + IDE +++ R SGPGGQ V T++ V LTH+PT
Sbjct: 208 NQGRRQTSFAGVEILPVVEQTDHIEIDESELRVDVYRSSGPGGQGVNTTDSAVRLTHLPT 267
Query: 88 GIVIKCHQSRSLSENRKTARELLVAQ 113
GIV+ C RS +N+ +A +L A+
Sbjct: 268 GIVVSCQNERSQIQNKASAMNVLQAK 293
>gi|410074963|ref|XP_003955064.1| hypothetical protein KAFR_0A04930 [Kazachstania africana CBS 2517]
gi|372461646|emb|CCF55929.1| hypothetical protein KAFR_0A04930 [Kazachstania africana CBS 2517]
Length = 156
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 44/67 (65%), Gaps = 2/67 (2%)
Query: 51 PKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELL 110
P ++ + ++ G GPGGQ + KTN+ V L HIPTGIV+KC ++RS NR+ ARE +
Sbjct: 30 PDLEPQCVEAFMHGGRGPGGQKINKTNSKVELRHIPTGIVVKCQETRSRERNRQIAREKM 89
Query: 111 VAQWDVQ 117
+++Q
Sbjct: 90 A--YEIQ 94
>gi|417071544|ref|ZP_11950184.1| peptide chain release factor 1, partial [Lactobacillus rhamnosus
MTCC 5462]
gi|328463686|gb|EGF35274.1| peptide chain release factor 1 [Lactobacillus rhamnosus MTCC 5462]
Length = 198
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 38/59 (64%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELL 110
KID KDI+ R SG GGQ V KT++ V +THIPTGIV+ RS ENR A ++L
Sbjct: 56 KIDPKDIRTDVYRSSGAGGQHVNKTSSAVRMTHIPTGIVVSMQDERSQQENRARAMQIL 114
>gi|302534760|ref|ZP_07287102.1| peptide chain release factor 2 [Streptomyces sp. C]
gi|302443655|gb|EFL15471.1| peptide chain release factor 2 [Streptomyces sp. C]
Length = 369
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 56/99 (56%), Gaps = 20/99 (20%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
+IDE +++ R SGPGGQ V T++ V +THIPTGIV+ C RS +N+ +A +L
Sbjct: 232 EIDESELRVDVYRASGPGGQGVNTTDSAVRITHIPTGIVVSCQNERSQIQNKASAMNVLQ 291
Query: 112 AQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKLDALK 150
A ++ E+RR QE++ R +DALK
Sbjct: 292 A-----------------KLLERRR--QEEQAR-MDALK 310
>gi|170728014|ref|YP_001762040.1| peptide chain release factor 1 [Shewanella woodyi ATCC 51908]
gi|238688639|sp|B1KDU3.1|RF1_SHEWM RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|169813361|gb|ACA87945.1| peptide chain release factor 1 [Shewanella woodyi ATCC 51908]
Length = 361
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 56/96 (58%), Gaps = 15/96 (15%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
+I++ D++ R SG GGQ V KT++ + +THIPTGIV++C RS +NR A +
Sbjct: 218 EINKADLKVDTFRASGAGGQHVNKTDSAIRITHIPTGIVVECQDQRSQHKNRAQAMSV-- 275
Query: 112 AQWDVQVNGEDSLNAQIRRI-DEKRRATQEQKKRKL 146
L+A+I+ + DEKRR+ +E +R L
Sbjct: 276 ------------LSARIQAVEDEKRRSEEESTRRNL 299
>gi|440696583|ref|ZP_20879039.1| peptide chain release factor 2 [Streptomyces turgidiscabies Car8]
gi|440281166|gb|ELP68825.1| peptide chain release factor 2 [Streptomyces turgidiscabies Car8]
Length = 368
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 49/86 (56%), Gaps = 5/86 (5%)
Query: 33 NDGYHRNLVSNIDIYSTIPK-----IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 87
N G + + ++I + + IDE +++ R SGPGGQ V T++ V LTH+PT
Sbjct: 208 NQGRRQTSFAGVEILPVVEQTDHIEIDESELRVDVYRSSGPGGQGVNTTDSAVRLTHLPT 267
Query: 88 GIVIKCHQSRSLSENRKTARELLVAQ 113
GIV+ C RS +N+ +A +L A+
Sbjct: 268 GIVVSCQNERSQIQNKASAMNVLQAK 293
>gi|448118553|ref|XP_004203527.1| Piso0_001138 [Millerozyma farinosa CBS 7064]
gi|448120959|ref|XP_004204110.1| Piso0_001138 [Millerozyma farinosa CBS 7064]
gi|359384395|emb|CCE79099.1| Piso0_001138 [Millerozyma farinosa CBS 7064]
gi|359384978|emb|CCE78513.1| Piso0_001138 [Millerozyma farinosa CBS 7064]
Length = 190
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 58/101 (57%), Gaps = 5/101 (4%)
Query: 62 FVRGS-GPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVAQWDVQVNG 120
F++G GPGGQ + KTN+ V L H PT IV+ C SRS +NRK ARE+L + + N
Sbjct: 62 FIKGGRGPGGQKINKTNSKVQLRHKPTNIVVTCQYSRSQEQNRKKAREILALKLEELENP 121
Query: 121 EDSLNAQIR----RIDEKRRATQEQKKRKLDALKKAWKERE 157
E A ++ ++ + + +K +K++ ++ KE+E
Sbjct: 122 EHCRTAVLKERESKVKQNKMKKSTRKYKKIEEERQLQKEKE 162
>gi|167625123|ref|YP_001675417.1| peptide chain release factor 1 [Shewanella halifaxensis HAW-EB4]
gi|189039991|sp|B0TR27.1|RF1_SHEHH RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|167355145|gb|ABZ77758.1| peptide chain release factor 1 [Shewanella halifaxensis HAW-EB4]
Length = 361
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 55/96 (57%), Gaps = 15/96 (15%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
+I++ D++ R SG GGQ V KT++ + +THIPTGIV++C RS +NR A +L
Sbjct: 218 EINKADLKVDTFRASGAGGQHVNKTDSAIRITHIPTGIVVECQDQRSQHKNRAQAMSVLA 277
Query: 112 AQWDVQVNGEDSLNAQIRRI-DEKRRATQEQKKRKL 146
A+I+ + DEKRR+ +E +R L
Sbjct: 278 --------------ARIQAVEDEKRRSAEESTRRNL 299
>gi|406912333|gb|EKD51968.1| hypothetical protein ACD_62C00149G0002 [uncultured bacterium]
Length = 312
Score = 62.4 bits (150), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 44/68 (64%), Gaps = 5/68 (7%)
Query: 43 NIDIYSTIPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSEN 102
+IDI +I E+D++ +R SG GGQ V KT++ V LTH PTGIV++C RS +N
Sbjct: 173 DIDI-----QIKEEDLEFEAIRASGAGGQKVNKTSSAVRLTHKPTGIVVRCQTERSQHQN 227
Query: 103 RKTARELL 110
R TA +L
Sbjct: 228 RATAMNML 235
>gi|389862939|ref|YP_006365179.1| peptide chain release factor 2 [Modestobacter marinus]
gi|388485142|emb|CCH86686.1| Peptide chain release factor 2 [Modestobacter marinus]
Length = 370
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 46/85 (54%), Gaps = 5/85 (5%)
Query: 33 NDGYHRNLVSNIDIYSTIPKIDEKDIQER-----FVRGSGPGGQAVAKTNNCVVLTHIPT 87
N G + + +++ + + D DI E R SGPGGQ+V T++ V +THIPT
Sbjct: 207 NQGRRQTSFAGVEVLPVVEQTDHVDIPENEIRVDVFRSSGPGGQSVNTTDSAVRMTHIPT 266
Query: 88 GIVIKCHQSRSLSENRKTARELLVA 112
GIV+ C +S +NR A +L A
Sbjct: 267 GIVVSCQNEKSQIQNRAAALRVLQA 291
>gi|409358684|ref|ZP_11237043.1| peptide chain release factor 2 [Dietzia alimentaria 72]
Length = 369
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 61/119 (51%), Gaps = 8/119 (6%)
Query: 3 IKIVMWPMRDRNLAGIRLLES---QVTITRELRNDGYHRNLVSNIDIYSTIPKIDEKDIQ 59
IK + +RD + G +E ++ N G + + +++ + +D DI
Sbjct: 173 IKSATFVVRDPYMYGTLSVEQGTHRLVRISPFDNQGRRQTSFAEVEVLPVVETVDSIDIP 232
Query: 60 ERFVR-----GSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVAQ 113
E VR SGPGGQ+V T++ V LTH+PTGIV+ C +S +N+ A ++L A+
Sbjct: 233 ENDVRVDVYRSSGPGGQSVNTTDSAVRLTHVPTGIVVTCQNEKSQLQNKVAAMKVLQAK 291
>gi|384564721|ref|ZP_10011825.1| peptide chain release factor 2 [Saccharomonospora glauca K62]
gi|384520575|gb|EIE97770.1| peptide chain release factor 2 [Saccharomonospora glauca K62]
Length = 368
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 43/62 (69%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
+I EKDI+ R SGPGGQ+V T++ V +TH+PTGIV+ C +S +N+ +A ++L
Sbjct: 231 EIPEKDIRVDVYRSSGPGGQSVNTTDSAVRITHLPTGIVVSCQNEKSQLQNKASAMKVLQ 290
Query: 112 AQ 113
A+
Sbjct: 291 AK 292
>gi|297620931|ref|YP_003709068.1| Peptide chain release factor 1 [Waddlia chondrophila WSU 86-1044]
gi|297376232|gb|ADI38062.1| Peptide chain release factor 1 [Waddlia chondrophila WSU 86-1044]
gi|337293247|emb|CCB91238.1| peptide chain release factor 1 [Waddlia chondrophila 2032/99]
Length = 354
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/62 (51%), Positives = 40/62 (64%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
+IDEKD++ R SG GGQ V T++ V LTHIPTGIV C + RS +NR A LL
Sbjct: 215 QIDEKDLRVDTYRASGAGGQHVNTTDSAVRLTHIPTGIVAYCSEERSQHKNRDKAMRLLK 274
Query: 112 AQ 113
A+
Sbjct: 275 AK 276
>gi|296268776|ref|YP_003651408.1| peptide chain release factor 2 [Thermobispora bispora DSM 43833]
gi|296091563|gb|ADG87515.1| peptide chain release factor 2 [Thermobispora bispora DSM 43833]
Length = 378
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 46/78 (58%), Gaps = 5/78 (6%)
Query: 41 VSNIDIYSTIPKIDEKDIQERFVR-----GSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQ 95
+ +D+ + + D+ +I E +R SGPGGQ V T++ V +TH+PTGIV+ C
Sbjct: 216 FAGVDVMPVVEQTDDIEINEDEIRIDVYRSSGPGGQGVNTTDSAVRITHLPTGIVVSCQN 275
Query: 96 SRSLSENRKTARELLVAQ 113
RS +NR TA +L A+
Sbjct: 276 ERSQLQNRATAMAVLKAK 293
>gi|312140591|ref|YP_004007927.1| peptide chain release factor prfb [Rhodococcus equi 103S]
gi|325675787|ref|ZP_08155471.1| peptide chain release factor RF2 [Rhodococcus equi ATCC 33707]
gi|311889930|emb|CBH49247.1| peptide chain release factor PrfB [Rhodococcus equi 103S]
gi|325553758|gb|EGD23436.1| peptide chain release factor RF2 [Rhodococcus equi ATCC 33707]
Length = 367
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 41/61 (67%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
IDE D++ R SGPGGQ+V T++ V LTH+PTGIV+ C +S +N+ +A +L A
Sbjct: 231 IDENDVRVDVYRSSGPGGQSVNTTDSAVRLTHVPTGIVVTCQNEKSQLQNKVSAMRVLQA 290
Query: 113 Q 113
+
Sbjct: 291 K 291
>gi|257054828|ref|YP_003132660.1| peptide chain release factor 2 [Saccharomonospora viridis DSM
43017]
gi|256584700|gb|ACU95833.1| bacterial peptide chain release factor 2 (bRF-2) [Saccharomonospora
viridis DSM 43017]
Length = 368
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 50/78 (64%), Gaps = 5/78 (6%)
Query: 41 VSNIDIYSTIPKID-----EKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQ 95
+++++ + +ID EKDI+ R SGPGGQ+V T++ V +TH+PTGIV+ C
Sbjct: 215 FAHVEVLPEVEEIDHVEIPEKDIRVDVYRSSGPGGQSVNTTDSAVRITHLPTGIVVSCQN 274
Query: 96 SRSLSENRKTARELLVAQ 113
+S +N+ +A ++L A+
Sbjct: 275 EKSQLQNKASAMKVLQAK 292
>gi|453366616|dbj|GAC77990.1| peptide chain release factor 2 [Gordonia malaquae NBRC 108250]
Length = 370
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 39/60 (65%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
IDE D++ R SGPGGQ+V T++ V LTH+PTGIV+ C +S +N+ A +L A
Sbjct: 235 IDENDLRVDVYRSSGPGGQSVNTTDSAVRLTHVPTGIVVTCQNEKSQLQNKAAAMRVLQA 294
>gi|418460746|ref|ZP_13031834.1| peptide chain release factor 2 [Saccharomonospora azurea SZMC
14600]
gi|359739213|gb|EHK88085.1| peptide chain release factor 2 [Saccharomonospora azurea SZMC
14600]
Length = 368
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 43/62 (69%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
+I EKDI+ R SGPGGQ+V T++ V +TH+PTGIV+ C +S +N+ +A ++L
Sbjct: 231 EIPEKDIRVDVYRSSGPGGQSVNTTDSAVRITHLPTGIVVSCQNEKSQLQNKASAMKVLQ 290
Query: 112 AQ 113
A+
Sbjct: 291 AK 292
>gi|290959957|ref|YP_003491139.1| peptide chain release factor 2 [Streptomyces scabiei 87.22]
gi|260649483|emb|CBG72598.1| peptide chain release factor 2 [Streptomyces scabiei 87.22]
Length = 368
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 41/62 (66%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
+IDE +++ R SGPGGQ V T++ V LTH+PTGIV+ C RS +N+ +A +L
Sbjct: 232 EIDESELRVDVYRSSGPGGQGVNTTDSAVRLTHLPTGIVVSCQNERSQIQNKASAMNVLQ 291
Query: 112 AQ 113
A+
Sbjct: 292 AK 293
>gi|157962943|ref|YP_001502977.1| peptide chain release factor 1 [Shewanella pealeana ATCC 700345]
gi|189039992|sp|A8H7A5.1|RF1_SHEPA RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|157847943|gb|ABV88442.1| peptide chain release factor 1 [Shewanella pealeana ATCC 700345]
Length = 361
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 55/96 (57%), Gaps = 15/96 (15%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
+I++ D++ R SG GGQ V KT++ + +THIPTGIV++C RS +NR A +L
Sbjct: 218 EINKADLKVDTFRASGAGGQHVNKTDSAIRITHIPTGIVVECQDQRSQHKNRAQAMSVLA 277
Query: 112 AQWDVQVNGEDSLNAQIRRI-DEKRRATQEQKKRKL 146
A+I+ + DEKRR+ +E +R L
Sbjct: 278 --------------ARIQAVEDEKRRSAEESTRRNL 299
>gi|402496775|ref|YP_006556035.1| protein chain release factor B [Wolbachia endosymbiont of
Onchocerca ochengi]
gi|398650048|emb|CCF78218.1| protein chain release factor B [Wolbachia endosymbiont of
Onchocerca ochengi]
Length = 284
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 40/58 (68%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELL 110
+DEKD++ R SG GGQ V KT + V +THIPTG++I+C SRS +N+ A +LL
Sbjct: 152 VDEKDLRIDTYRASGAGGQHVNKTESAVRITHIPTGVIIQCQNSRSQHQNKNEALKLL 209
>gi|39995653|ref|NP_951604.1| peptidyl-tRNA hydrolase-like protein [Geobacter sulfurreducens PCA]
gi|409911111|ref|YP_006889576.1| peptidyl-tRNA hydrolase-like protein [Geobacter sulfurreducens
KN400]
gi|39982416|gb|AAR33877.1| peptidyl-tRNA hydrolase-related protein [Geobacter sulfurreducens
PCA]
gi|298504676|gb|ADI83399.1| peptidyl-tRNA hydrolase-related protein [Geobacter sulfurreducens
KN400]
Length = 126
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 36/55 (65%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTAR 107
+ E D++E FVR SG GGQ V KT CV + H PTGI +KC + RS S NR AR
Sbjct: 25 VSEADLEETFVRSSGAGGQHVNKTATCVQIRHRPTGIEVKCMKDRSQSVNRFLAR 79
>gi|363419407|ref|ZP_09307508.1| peptide chain release factor 2 [Rhodococcus pyridinivorans AK37]
gi|359737492|gb|EHK86424.1| peptide chain release factor 2 [Rhodococcus pyridinivorans AK37]
Length = 372
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 40/61 (65%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
IDE D++ R SGPGGQ+V T++ V LTHIPTGIV+ C +S +N+ A +L A
Sbjct: 235 IDENDVRVDVYRSSGPGGQSVNTTDSAVRLTHIPTGIVVTCQNEKSQLQNKVAAMRVLQA 294
Query: 113 Q 113
+
Sbjct: 295 K 295
>gi|333989938|ref|YP_004522552.1| peptide chain release factor 1 [Mycobacterium sp. JDM601]
gi|333485906|gb|AEF35298.1| peptide chain release factor 1 PrfA [Mycobacterium sp. JDM601]
Length = 358
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 49/90 (54%), Gaps = 6/90 (6%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELL-- 110
IDE D++ R SG GGQ V T++ V LTH+PTGIV+ C RS +N+ A ++L
Sbjct: 218 IDESDLRVDVYRSSGKGGQGVNTTDSAVRLTHLPTGIVVTCQNERSQLQNKARALQVLAA 277
Query: 111 ----VAQWDVQVNGEDSLNAQIRRIDEKRR 136
+A+ Q + +QIR +D R
Sbjct: 278 RLQALAEEQAQADASADRASQIRTVDRSER 307
>gi|259506494|ref|ZP_05749396.1| peptide chain release factor 2 [Corynebacterium efficiens YS-314]
gi|259165914|gb|EEW50468.1| peptide chain release factor 2 [Corynebacterium efficiens YS-314]
Length = 387
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 50/86 (58%), Gaps = 5/86 (5%)
Query: 33 NDGYHRNLVSNIDIYSTIPKIDEKDIQERFVR-----GSGPGGQAVAKTNNCVVLTHIPT 87
N G + + +++ + ++D DI + VR SGPGGQ+V T++ V LTHIPT
Sbjct: 225 NQGRRQTSFAEVEVLPVVEQVDSIDIPDSEVRVDVYRSSGPGGQSVNTTDSAVRLTHIPT 284
Query: 88 GIVIKCHQSRSLSENRKTARELLVAQ 113
GIV+ C +S +N+ +A +L A+
Sbjct: 285 GIVVTCQNEKSQIQNKASAMRVLQAK 310
>gi|320355124|ref|YP_004196463.1| peptide chain release factor 2 (bRF-2) [Desulfobulbus propionicus
DSM 2032]
gi|320123626|gb|ADW19172.1| bacterial peptide chain release factor 2 (bRF-2) [Desulfobulbus
propionicus DSM 2032]
Length = 369
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 42/61 (68%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
+I++KDI+ R SG GGQ V KT++ + +TH PTGIV++C RS N+ TA ++L+
Sbjct: 236 EINDKDIRIDTYRASGSGGQHVNKTDSAIRITHFPTGIVVQCQNERSQHSNKATAMKMLM 295
Query: 112 A 112
A
Sbjct: 296 A 296
>gi|294812911|ref|ZP_06771554.1| Peptide chain release factor 2 [Streptomyces clavuligerus ATCC
27064]
gi|326441313|ref|ZP_08216047.1| peptide chain release factor 2 [Streptomyces clavuligerus ATCC
27064]
gi|294325510|gb|EFG07153.1| Peptide chain release factor 2 [Streptomyces clavuligerus ATCC
27064]
Length = 368
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 56/99 (56%), Gaps = 20/99 (20%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
+IDE +++ R SGPGGQ V T++ V +THIPTGIV+ C RS +N+ +A +L
Sbjct: 232 EIDETELRVDVYRASGPGGQGVNTTDSAVRITHIPTGIVVSCQNERSQIQNKASAMNVLQ 291
Query: 112 AQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKLDALK 150
A ++ E+RR QE++ R +DALK
Sbjct: 292 A-----------------KLLERRR--QEEQAR-MDALK 310
>gi|374262094|ref|ZP_09620667.1| hypothetical protein LDG_7072 [Legionella drancourtii LLAP12]
gi|363537502|gb|EHL30923.1| hypothetical protein LDG_7072 [Legionella drancourtii LLAP12]
Length = 135
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 45/75 (60%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
I+E + E+F+ GSG GGQ + KT + V L H+P+GI IKC +SRS NR AR L
Sbjct: 19 INEDSLIEKFIIGSGKGGQKLHKTASTVYLKHVPSGIEIKCQESRSREGNRYFARVRLCE 78
Query: 113 QWDVQVNGEDSLNAQ 127
++ ++ E + Q
Sbjct: 79 KYHAIISDEKTKEQQ 93
>gi|357413121|ref|YP_004924857.1| peptide chain release factor 2 [Streptomyces flavogriseus ATCC
33331]
gi|320010490|gb|ADW05340.1| peptide chain release factor 2 [Streptomyces flavogriseus ATCC
33331]
Length = 368
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 41/62 (66%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
+IDE +++ R SGPGGQ V T++ V LTH+PTGIV+ C RS +N+ +A +L
Sbjct: 232 EIDESELRVDVYRSSGPGGQGVNTTDSAVRLTHLPTGIVVSCQNERSQIQNKASAMNVLQ 291
Query: 112 AQ 113
A+
Sbjct: 292 AK 293
>gi|456385063|gb|EMF50641.1| prfB protein [Streptomyces bottropensis ATCC 25435]
Length = 368
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 41/62 (66%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
+IDE +++ R SGPGGQ V T++ V LTH+PTGIV+ C RS +N+ +A +L
Sbjct: 232 EIDESELRVDVYRSSGPGGQGVNTTDSAVRLTHLPTGIVVSCQNERSQIQNKASAMNVLQ 291
Query: 112 AQ 113
A+
Sbjct: 292 AK 293
>gi|381164618|ref|ZP_09873848.1| peptide chain release factor 2 [Saccharomonospora azurea NA-128]
gi|379256523|gb|EHY90449.1| peptide chain release factor 2 [Saccharomonospora azurea NA-128]
Length = 368
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 43/62 (69%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
+I EKDI+ R SGPGGQ+V T++ V +TH+PTGIV+ C +S +N+ +A ++L
Sbjct: 231 EIPEKDIRVDVYRSSGPGGQSVNTTDSAVRITHLPTGIVVSCQNEKSQLQNKASAMKVLQ 290
Query: 112 AQ 113
A+
Sbjct: 291 AK 292
>gi|291445100|ref|ZP_06584490.1| peptide chain release factor 2 [Streptomyces roseosporus NRRL
15998]
gi|291348047|gb|EFE74951.1| peptide chain release factor 2 [Streptomyces roseosporus NRRL
15998]
Length = 368
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 41/62 (66%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
+IDE +++ R SGPGGQ V T++ V LTH+PTGIV+ C RS +N+ +A +L
Sbjct: 232 EIDESELRVDVYRSSGPGGQGVNTTDSAVRLTHLPTGIVVSCQNERSQIQNKASAMNVLQ 291
Query: 112 AQ 113
A+
Sbjct: 292 AK 293
>gi|418245203|ref|ZP_12871610.1| peptide chain release factor 1 [Corynebacterium glutamicum ATCC
14067]
gi|354510611|gb|EHE83533.1| peptide chain release factor 1 [Corynebacterium glutamicum ATCC
14067]
Length = 358
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 41/61 (67%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
+IDEKDI+ R SG GGQ V T++ V +TH+PTG+V+ C + RS +NR A ++L
Sbjct: 217 EIDEKDIRVDVYRSSGKGGQGVNTTDSAVRITHLPTGLVVTCQKERSQIQNRARAMQVLA 276
Query: 112 A 112
A
Sbjct: 277 A 277
>gi|25027367|ref|NP_737421.1| peptide chain release factor 2 [Corynebacterium efficiens YS-314]
gi|23492648|dbj|BAC17621.1| putative translation releasing factor RF-2 [Corynebacterium
efficiens YS-314]
Length = 389
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 50/86 (58%), Gaps = 5/86 (5%)
Query: 33 NDGYHRNLVSNIDIYSTIPKIDEKDIQERFVR-----GSGPGGQAVAKTNNCVVLTHIPT 87
N G + + +++ + ++D DI + VR SGPGGQ+V T++ V LTHIPT
Sbjct: 227 NQGRRQTSFAEVEVLPVVEQVDSIDIPDSEVRVDVYRSSGPGGQSVNTTDSAVRLTHIPT 286
Query: 88 GIVIKCHQSRSLSENRKTARELLVAQ 113
GIV+ C +S +N+ +A +L A+
Sbjct: 287 GIVVTCQNEKSQIQNKASAMRVLQAK 312
>gi|365861270|ref|ZP_09401044.1| peptide chain release factor 2 [Streptomyces sp. W007]
gi|364009264|gb|EHM30230.1| peptide chain release factor 2 [Streptomyces sp. W007]
Length = 368
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 41/62 (66%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
+IDE +++ R SGPGGQ V T++ V LTH+PTGIV+ C RS +N+ +A +L
Sbjct: 232 EIDESELRVDVYRSSGPGGQGVNTTDSAVRLTHLPTGIVVSCQNERSQIQNKASAMNVLQ 291
Query: 112 AQ 113
A+
Sbjct: 292 AK 293
>gi|19552424|ref|NP_600426.1| peptide chain release factor 1 [Corynebacterium glutamicum ATCC
13032]
gi|62390088|ref|YP_225490.1| peptide chain release factor 1 [Corynebacterium glutamicum ATCC
13032]
gi|145295339|ref|YP_001138160.1| peptide chain release factor 1 [Corynebacterium glutamicum R]
gi|417970006|ref|ZP_12610941.1| peptide chain release factor 1 [Corynebacterium glutamicum S9114]
gi|24418635|sp|Q8NR57.1|RF1_CORGL RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|166223553|sp|A4QDG1.1|RF1_CORGB RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|21323967|dbj|BAB98593.1| Protein chain release factor A [Corynebacterium glutamicum ATCC
13032]
gi|41325424|emb|CAF19904.1| PEPTIDE CHAIN RELEASE FACTOR 1 (RF-1) [Corynebacterium glutamicum
ATCC 13032]
gi|140845259|dbj|BAF54258.1| hypothetical protein [Corynebacterium glutamicum R]
gi|344045688|gb|EGV41358.1| peptide chain release factor 1 [Corynebacterium glutamicum S9114]
Length = 358
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 41/61 (67%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
+IDEKDI+ R SG GGQ V T++ V +TH+PTG+V+ C + RS +NR A ++L
Sbjct: 217 EIDEKDIRVDVYRSSGKGGQGVNTTDSAVRITHLPTGLVVTCQKERSQIQNRARAMQVLA 276
Query: 112 A 112
A
Sbjct: 277 A 277
>gi|134097701|ref|YP_001103362.1| peptide chain release factor 2 [Saccharopolyspora erythraea NRRL
2338]
gi|291006339|ref|ZP_06564312.1| putative peptide chain release factor 2 [Saccharopolyspora
erythraea NRRL 2338]
gi|166225115|sp|A4F8R2.1|RF2_SACEN RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|133910324|emb|CAM00437.1| putative peptide chain release factor 2 [Saccharopolyspora
erythraea NRRL 2338]
Length = 367
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 64/125 (51%), Gaps = 25/125 (20%)
Query: 33 NDGYHRNLVSNIDIYSTIPKID-----EKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 87
N G + + +++ + + D EKDI+ R SGPGGQ+V T++ V +THIPT
Sbjct: 207 NQGRRQTSFAGVEVLPVVEETDHVEIPEKDIRVDVFRSSGPGGQSVNTTDSAVRITHIPT 266
Query: 88 GIVIKCHQSRSLSENRKTARELLVAQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKLD 147
GIV+ C +S +N+ A +L Q + + +K+ EQ++ +LD
Sbjct: 267 GIVVSCQNEKSQLQNKAAALRVL----------------QSKLLAKKK----EQERAELD 306
Query: 148 ALKKA 152
ALK +
Sbjct: 307 ALKDS 311
>gi|336310167|ref|ZP_08565139.1| peptide chain release factor 1 [Shewanella sp. HN-41]
gi|335865897|gb|EGM70888.1| peptide chain release factor 1 [Shewanella sp. HN-41]
Length = 363
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 54/97 (55%), Gaps = 15/97 (15%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
I+ D++ R SG GGQ V KT++ + +THIPTGIV++C RS +NR A +L
Sbjct: 219 INPADLKVDTFRSSGAGGQHVNKTDSAIRITHIPTGIVVECQDQRSQHKNRAQAMSVLA- 277
Query: 113 QWDVQVNGEDSLNAQIRRI-DEKRRATQEQKKRKLDA 148
A+I+ + DEKRR+ +E +R L A
Sbjct: 278 -------------ARIQAVEDEKRRSAEESTRRSLVA 301
>gi|333024883|ref|ZP_08452947.1| putative peptide chain release factor 2 [Streptomyces sp. Tu6071]
gi|332744735|gb|EGJ75176.1| putative peptide chain release factor 2 [Streptomyces sp. Tu6071]
Length = 373
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 41/62 (66%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
+IDE +++ R SGPGGQ V T++ V LTH+PTGIV+ C RS +N+ +A +L
Sbjct: 234 EIDESELRVDVYRSSGPGGQGVNTTDSAVRLTHLPTGIVVSCQNERSQIQNKASAMNVLQ 293
Query: 112 AQ 113
A+
Sbjct: 294 AK 295
>gi|289207525|ref|YP_003459591.1| peptide chain release factor 1 [Thioalkalivibrio sp. K90mix]
gi|288943156|gb|ADC70855.1| peptide chain release factor 1 [Thioalkalivibrio sp. K90mix]
Length = 361
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 40/63 (63%)
Query: 50 IPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTAREL 109
+P I+ D++ R SG GGQ V KT++ V LTH+PTGIV++C + RS +NR A
Sbjct: 216 MPDINPADLRVDTFRASGAGGQHVNKTDSAVRLTHLPTGIVVECQEERSQHKNRAKAMTY 275
Query: 110 LVA 112
L A
Sbjct: 276 LAA 278
>gi|342215025|ref|ZP_08707694.1| peptide chain release factor 2 [Veillonella sp. oral taxon 780 str.
F0422]
gi|341590131|gb|EGS33380.1| peptide chain release factor 2 [Veillonella sp. oral taxon 780 str.
F0422]
Length = 330
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 54/88 (61%), Gaps = 9/88 (10%)
Query: 50 IPKIDE--------KDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSE 101
+P+IDE KD+Q R SG GGQ + KT++ V +THIPTGIV++C RS +
Sbjct: 183 MPEIDETVEINLDMKDVQVDTYRASGAGGQHINKTDSAVRMTHIPTGIVVQCQSERSQIQ 242
Query: 102 NRKTARELLVAQ-WDVQVNGEDSLNAQI 128
NR+ +LL A+ +++++ + L Q+
Sbjct: 243 NREQCLKLLRAKLFELELEKQAELKEQL 270
>gi|329897171|ref|ZP_08271911.1| Peptide chain release factor 1 [gamma proteobacterium IMCC3088]
gi|328921326|gb|EGG28720.1| Peptide chain release factor 1 [gamma proteobacterium IMCC3088]
Length = 361
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 52/95 (54%), Gaps = 13/95 (13%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
+I++ DI+ R SG GGQ V KT++ + +TH+PTGIV++C RS +NR A LL
Sbjct: 218 EINKADIRVDTFRASGAGGQHVNKTDSAIRITHLPTGIVVECQDERSQHKNRARAMSLLQ 277
Query: 112 AQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKL 146
A+ D +EK + Q Q++R L
Sbjct: 278 AKLDTAA-------------EEKAASEQAQERRNL 299
>gi|302521474|ref|ZP_07273816.1| peptide chain release factor 2 [Streptomyces sp. SPB78]
gi|318056789|ref|ZP_07975512.1| peptide chain release factor 2 [Streptomyces sp. SA3_actG]
gi|318081122|ref|ZP_07988454.1| peptide chain release factor 2 [Streptomyces sp. SA3_actF]
gi|302430369|gb|EFL02185.1| peptide chain release factor 2 [Streptomyces sp. SPB78]
Length = 371
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 41/62 (66%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
+IDE +++ R SGPGGQ V T++ V LTH+PTGIV+ C RS +N+ +A +L
Sbjct: 232 EIDESELRVDVYRSSGPGGQGVNTTDSAVRLTHLPTGIVVSCQNERSQIQNKASAMNVLQ 291
Query: 112 AQ 113
A+
Sbjct: 292 AK 293
>gi|224369062|ref|YP_002603226.1| hypothetical protein HRM2_19610 [Desulfobacterium autotrophicum
HRM2]
gi|223691779|gb|ACN15062.1| hypothetical protein HRM2_19610 [Desulfobacterium autotrophicum
HRM2]
Length = 118
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 44/71 (61%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
I++ DI+E+FV+GSG GGQ V KT+ V L H+PTGI +KC RS NR A LV
Sbjct: 21 INKADIEEKFVKGSGRGGQKVNKTSVAVFLRHLPTGITVKCGSERSQHLNRFLALRRLVD 80
Query: 113 QWDVQVNGEDS 123
+ + + G +
Sbjct: 81 RIEACMTGMEG 91
>gi|325266606|ref|ZP_08133283.1| peptide chain release factor RF2 [Kingella denitrificans ATCC
33394]
gi|324982049|gb|EGC17684.1| peptide chain release factor RF2 [Kingella denitrificans ATCC
33394]
Length = 367
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 68/133 (51%), Gaps = 19/133 (14%)
Query: 20 LLESQVTITRELRNDGYHRNLVSNIDIYSTI--PKIDEK--------DIQERFVRGSGPG 69
LL ++ + R +R + N + S P++D+ D++ R SG G
Sbjct: 193 LLRTETGVHRLVRYSPFDSNNKRHTSFASVFVYPEVDDSFEVEINPADVRTDTYRASGAG 252
Query: 70 GQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVAQWDVQVNGEDSLNAQIR 129
GQ + KT++ V +THIPTGIV++ SRS ENR+ E+L A+ ++R
Sbjct: 253 GQHINKTDSAVRMTHIPTGIVVQSQNSRSQHENRRVCEEMLRAKL---------FELEMR 303
Query: 130 RIDEKRRATQEQK 142
+ +E+++A +E K
Sbjct: 304 KRNEEKQALEEGK 316
>gi|225025532|ref|ZP_03714724.1| hypothetical protein EIKCOROL_02432 [Eikenella corrodens ATCC
23834]
gi|224941678|gb|EEG22887.1| hypothetical protein EIKCOROL_02432 [Eikenella corrodens ATCC
23834]
Length = 367
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 69/133 (51%), Gaps = 19/133 (14%)
Query: 20 LLESQVTITRELRNDGYHRNLVSNIDIYSTI--PKIDEK--------DIQERFVRGSGPG 69
LL ++ + R +R+ + N + S P++D+ D++ R SG G
Sbjct: 193 LLRTETGVHRLVRHSPFDSNNKRHTSFASVFVYPEVDDSFEVEINPADVRTDTFRASGAG 252
Query: 70 GQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVAQWDVQVNGEDSLNAQIR 129
GQ + KT++ V +THIPTGIV++ SRS +NR+ E+L A+ ++R
Sbjct: 253 GQHINKTDSAVRMTHIPTGIVVQSQNSRSQHDNRRVCEEMLRAKL---------FELEMR 303
Query: 130 RIDEKRRATQEQK 142
+ +E+++A +E K
Sbjct: 304 KRNEEKQALEEGK 316
>gi|182438348|ref|YP_001826067.1| peptide chain release factor 2 [Streptomyces griseus subsp. griseus
NBRC 13350]
gi|326778999|ref|ZP_08238264.1| Peptide chain release factor 2 [Streptomyces griseus XylebKG-1]
gi|238688991|sp|B1VV08.1|RF2_STRGG RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|178466864|dbj|BAG21384.1| putative peptide chain release factor 2 [Streptomyces griseus
subsp. griseus NBRC 13350]
gi|326659332|gb|EGE44178.1| Peptide chain release factor 2 [Streptomyces griseus XylebKG-1]
Length = 368
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 41/62 (66%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
+IDE +++ R SGPGGQ V T++ V LTH+PTGIV+ C RS +N+ +A +L
Sbjct: 232 EIDESELRVDVYRSSGPGGQGVNTTDSAVRLTHLPTGIVVSCQNERSQIQNKASAMNVLQ 291
Query: 112 AQ 113
A+
Sbjct: 292 AK 293
>gi|312199813|ref|YP_004019874.1| peptide chain release factor 2 [Frankia sp. EuI1c]
gi|311231149|gb|ADP84004.1| peptide chain release factor 2 [Frankia sp. EuI1c]
Length = 367
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 40/61 (65%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
ID+KD++ R SGPGGQ V T++ V +TH+PTGIV+ C RS +N+ A +L A
Sbjct: 228 IDDKDLRVDIFRSSGPGGQGVNTTDSAVRITHLPTGIVVTCQNERSQLQNKAAAMVVLQA 287
Query: 113 Q 113
+
Sbjct: 288 K 288
>gi|239988119|ref|ZP_04708783.1| peptide chain release factor 2 [Streptomyces roseosporus NRRL
11379]
Length = 352
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 41/62 (66%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
+IDE +++ R SGPGGQ V T++ V LTH+PTGIV+ C RS +N+ +A +L
Sbjct: 216 EIDESELRVDVYRSSGPGGQGVNTTDSAVRLTHLPTGIVVSCQNERSQIQNKASAMNVLQ 275
Query: 112 AQ 113
A+
Sbjct: 276 AK 277
>gi|24375323|ref|NP_719366.1| peptide chain release factor 1 PrfA [Shewanella oneidensis MR-1]
gi|32171552|sp|Q8EAR3.1|RF1_SHEON RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|24350136|gb|AAN56810.1| peptide chain release factor 1 PrfA [Shewanella oneidensis MR-1]
Length = 363
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 54/97 (55%), Gaps = 15/97 (15%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
I+ D++ R SG GGQ V KT++ + +THIPTGIV++C RS +NR A +L
Sbjct: 219 INPADLKVDTFRSSGAGGQHVNKTDSAIRITHIPTGIVVECQDQRSQHKNRAQAMSVLA- 277
Query: 113 QWDVQVNGEDSLNAQIRRI-DEKRRATQEQKKRKLDA 148
A+I+ + DEKRR+ +E +R L A
Sbjct: 278 -------------ARIQAVEDEKRRSAEESTRRSLVA 301
>gi|411005038|ref|ZP_11381367.1| peptide chain release factor 2 [Streptomyces globisporus C-1027]
Length = 368
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 41/62 (66%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
+IDE +++ R SGPGGQ V T++ V LTH+PTGIV+ C RS +N+ +A +L
Sbjct: 232 EIDESELRVDVYRSSGPGGQGVNTTDSAVRLTHLPTGIVVSCQNERSQIQNKASAMNVLQ 291
Query: 112 AQ 113
A+
Sbjct: 292 AK 293
>gi|160876841|ref|YP_001556157.1| peptide chain release factor 1 [Shewanella baltica OS195]
gi|378710055|ref|YP_005274949.1| peptide chain release factor 1 [Shewanella baltica OS678]
gi|418022167|ref|ZP_12661154.1| Peptide chain release factor 1 [Shewanella baltica OS625]
gi|189039990|sp|A9L2D4.1|RF1_SHEB9 RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|160862363|gb|ABX50897.1| peptide chain release factor 1 [Shewanella baltica OS195]
gi|315269044|gb|ADT95897.1| peptide chain release factor 1 [Shewanella baltica OS678]
gi|353538392|gb|EHC07947.1| Peptide chain release factor 1 [Shewanella baltica OS625]
Length = 363
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 54/97 (55%), Gaps = 15/97 (15%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
I+ D++ R SG GGQ V KT++ + +THIPTGIV++C RS +NR A +L
Sbjct: 219 INPADLKVDTFRSSGAGGQHVNKTDSAIRITHIPTGIVVECQDQRSQHKNRAQAMSVLA- 277
Query: 113 QWDVQVNGEDSLNAQIRRI-DEKRRATQEQKKRKLDA 148
A+I+ + DEKRR+ +E +R L A
Sbjct: 278 -------------ARIQAVEDEKRRSAEESTRRSLVA 301
>gi|120600166|ref|YP_964740.1| peptide chain release factor 1 [Shewanella sp. W3-18-1]
gi|146291906|ref|YP_001182330.1| peptide chain release factor 1 [Shewanella putrefaciens CN-32]
gi|386312572|ref|YP_006008737.1| peptide chain release factor 1 [Shewanella putrefaciens 200]
gi|166223604|sp|A4Y3J8.1|RF1_SHEPC RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|166223606|sp|A1RNE1.1|RF1_SHESW RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|120560259|gb|ABM26186.1| bacterial peptide chain release factor 1 (bRF-1) [Shewanella sp.
W3-18-1]
gi|145563596|gb|ABP74531.1| bacterial peptide chain release factor 1 (bRF-1) [Shewanella
putrefaciens CN-32]
gi|319425197|gb|ADV53271.1| peptide chain release factor 1 [Shewanella putrefaciens 200]
Length = 363
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 54/97 (55%), Gaps = 15/97 (15%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
I+ D++ R SG GGQ V KT++ + +THIPTGIV++C RS +NR A +L
Sbjct: 219 INPADLKVDTFRSSGAGGQHVNKTDSAIRITHIPTGIVVECQDQRSQHKNRAQAMSVLA- 277
Query: 113 QWDVQVNGEDSLNAQIRRI-DEKRRATQEQKKRKLDA 148
A+I+ + DEKRR+ +E +R L A
Sbjct: 278 -------------ARIQAVEDEKRRSAEESTRRSLVA 301
>gi|348170778|ref|ZP_08877672.1| putative peptide chain release factor 2 [Saccharopolyspora spinosa
NRRL 18395]
Length = 368
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 47/83 (56%), Gaps = 5/83 (6%)
Query: 33 NDGYHRNLVSNIDIYSTIPKID-----EKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 87
N G + + +++ + + D EKDI+ R SGPGGQ+V T++ V +THIPT
Sbjct: 207 NQGRRQTSFAGVEVLPVVEETDHVDIPEKDIRVDVFRSSGPGGQSVNTTDSAVRITHIPT 266
Query: 88 GIVIKCHQSRSLSENRKTARELL 110
GIV+ C +S +N+ A +L
Sbjct: 267 GIVVSCQNEKSQLQNKAAAMRVL 289
>gi|145593537|ref|YP_001157834.1| peptide chain release factor 2 [Salinispora tropica CNB-440]
gi|189040004|sp|A4X3K6.1|RF2_SALTO RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|145302874|gb|ABP53456.1| bacterial peptide chain release factor 2 (bRF-2) [Salinispora
tropica CNB-440]
Length = 373
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 49/85 (57%), Gaps = 5/85 (5%)
Query: 33 NDGYHRNLVSNIDIYSTIPKIDEKDIQE---RF--VRGSGPGGQAVAKTNNCVVLTHIPT 87
N G + + +++ + + D DI E RF R SGPGGQ+V T++ V +THIPT
Sbjct: 208 NQGRRQTSFAGVEVLPVVEQTDHIDIPENEMRFDVYRSSGPGGQSVNTTDSAVRITHIPT 267
Query: 88 GIVIKCHQSRSLSENRKTARELLVA 112
GIV+ C +S +N+ +A +L A
Sbjct: 268 GIVVTCQNEKSQLQNKASALRVLQA 292
>gi|113971503|ref|YP_735296.1| peptide chain release factor 1 [Shewanella sp. MR-4]
gi|114046304|ref|YP_736854.1| peptide chain release factor 1 [Shewanella sp. MR-7]
gi|119361605|sp|Q0HFC8.1|RF1_SHESM RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|119361606|sp|Q0HYK8.1|RF1_SHESR RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|113886187|gb|ABI40239.1| bacterial peptide chain release factor 1 (bRF-1) [Shewanella sp.
MR-4]
gi|113887746|gb|ABI41797.1| bacterial peptide chain release factor 1 (bRF-1) [Shewanella sp.
MR-7]
Length = 363
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 54/97 (55%), Gaps = 15/97 (15%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
I+ D++ R SG GGQ V KT++ + +THIPTGIV++C RS +NR A +L
Sbjct: 219 INPADLKVDTFRSSGAGGQHVNKTDSAIRITHIPTGIVVECQDQRSQHKNRAQAMSVLA- 277
Query: 113 QWDVQVNGEDSLNAQIRRI-DEKRRATQEQKKRKLDA 148
A+I+ + DEKRR+ +E +R L A
Sbjct: 278 -------------ARIQAVEDEKRRSAEESTRRSLVA 301
>gi|374587319|ref|ZP_09660411.1| bacterial peptide chain release factor 2 (bRF-2) [Leptonema illini
DSM 21528]
gi|373876180|gb|EHQ08174.1| bacterial peptide chain release factor 2 (bRF-2) [Leptonema illini
DSM 21528]
Length = 391
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 41/60 (68%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
I+EKD++ R SG GGQ V KT++ + +THIPTGIV++C RS +NR A ++L A
Sbjct: 246 IEEKDLRVDTYRASGAGGQHVNKTDSAIRITHIPTGIVVQCQNERSQHKNRDRAMKMLKA 305
>gi|387138177|ref|YP_005694156.1| Peptide chain release factor 2 (RF-2) [Corynebacterium
pseudotuberculosis CIP 52.97]
gi|389849923|ref|YP_006352158.1| Peptide chain release factor 2 (RF-2) [Corynebacterium
pseudotuberculosis 258]
gi|349734655|gb|AEQ06133.1| Peptide chain release factor 2 (RF-2) [Corynebacterium
pseudotuberculosis CIP 52.97]
gi|388247229|gb|AFK16220.1| Peptide chain release factor 2 (RF-2) [Corynebacterium
pseudotuberculosis 258]
Length = 366
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 49/86 (56%), Gaps = 5/86 (5%)
Query: 33 NDGYHRNLVSNIDIYSTIPKIDEKDIQERFVR-----GSGPGGQAVAKTNNCVVLTHIPT 87
N G + + I++ + + D DI + VR SGPGGQ+V T++ V LTHIPT
Sbjct: 205 NQGRRQTSFAEIEVLPVVEQTDHIDIPDSEVRMDVYRSSGPGGQSVNTTDSAVRLTHIPT 264
Query: 88 GIVIKCHQSRSLSENRKTARELLVAQ 113
GIV+ C +S +N+ +A +L A+
Sbjct: 265 GIVVTCQNEKSQIQNKASAMRVLQAK 290
>gi|300857995|ref|YP_003782978.1| peptide chain release factor RF-2 [Corynebacterium
pseudotuberculosis FRC41]
gi|375288161|ref|YP_005122702.1| peptide chain release factor 2 (RF-2) [Corynebacterium
pseudotuberculosis 3/99-5]
gi|384504178|ref|YP_005680848.1| Peptide chain release factor 2 (RF-2) [Corynebacterium
pseudotuberculosis 1002]
gi|384506270|ref|YP_005682939.1| Peptide chain release factor 2 (RF-2) [Corynebacterium
pseudotuberculosis C231]
gi|384508358|ref|YP_005685026.1| Peptide chain release factor 2 (RF-2) [Corynebacterium
pseudotuberculosis I19]
gi|384510450|ref|YP_005690028.1| Peptide chain release factor 2 (RF-2) [Corynebacterium
pseudotuberculosis PAT10]
gi|385807033|ref|YP_005843430.1| Peptide chain release factor 2 (RF-2) [Corynebacterium
pseudotuberculosis 267]
gi|387136117|ref|YP_005692097.1| peptide chain release factor 2 (RF-2) [Corynebacterium
pseudotuberculosis 42/02-A]
gi|300685449|gb|ADK28371.1| peptide chain release factor RF-2 [Corynebacterium
pseudotuberculosis FRC41]
gi|302205723|gb|ADL10065.1| Peptide chain release factor 2 (RF-2) [Corynebacterium
pseudotuberculosis C231]
gi|302330275|gb|ADL20469.1| Peptide chain release factor 2 (RF-2) [Corynebacterium
pseudotuberculosis 1002]
gi|308275958|gb|ADO25857.1| Peptide chain release factor 2 (RF-2) [Corynebacterium
pseudotuberculosis I19]
gi|341824389|gb|AEK91910.1| Peptide chain release factor 2 (RF-2) [Corynebacterium
pseudotuberculosis PAT10]
gi|348606562|gb|AEP69835.1| Peptide chain release factor 2 (RF-2) [Corynebacterium
pseudotuberculosis 42/02-A]
gi|371575450|gb|AEX39053.1| Peptide chain release factor 2 (RF-2) [Corynebacterium
pseudotuberculosis 3/99-5]
gi|383804426|gb|AFH51505.1| Peptide chain release factor 2 (RF-2) [Corynebacterium
pseudotuberculosis 267]
Length = 366
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 49/86 (56%), Gaps = 5/86 (5%)
Query: 33 NDGYHRNLVSNIDIYSTIPKIDEKDIQERFVR-----GSGPGGQAVAKTNNCVVLTHIPT 87
N G + + I++ + + D DI + VR SGPGGQ+V T++ V LTHIPT
Sbjct: 205 NQGRRQTSFAEIEVLPVVEQTDHIDIPDSEVRVDVYRSSGPGGQSVNTTDSAVRLTHIPT 264
Query: 88 GIVIKCHQSRSLSENRKTARELLVAQ 113
GIV+ C +S +N+ +A +L A+
Sbjct: 265 GIVVTCQNEKSQIQNKASAMRVLQAK 290
>gi|117919221|ref|YP_868413.1| peptide chain release factor 1 [Shewanella sp. ANA-3]
gi|166223605|sp|A0KT88.1|RF1_SHESA RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|117611553|gb|ABK47007.1| bacterial peptide chain release factor 1 (bRF-1) [Shewanella sp.
ANA-3]
Length = 363
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 54/97 (55%), Gaps = 15/97 (15%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
I+ D++ R SG GGQ V KT++ + +THIPTGIV++C RS +NR A +L
Sbjct: 219 INPADLKVDTFRSSGAGGQHVNKTDSAIRITHIPTGIVVECQDQRSQHKNRAQAMSVLA- 277
Query: 113 QWDVQVNGEDSLNAQIRRI-DEKRRATQEQKKRKLDA 148
A+I+ + DEKRR+ +E +R L A
Sbjct: 278 -------------ARIQAVEDEKRRSAEESTRRSLVA 301
>gi|119715500|ref|YP_922465.1| peptide chain release factor 2 [Nocardioides sp. JS614]
gi|119536161|gb|ABL80778.1| bacterial peptide chain release factor 2 (bRF-2) [Nocardioides sp.
JS614]
Length = 375
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 37/55 (67%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTA 106
+IDE DI+ R GPGGQ+V T++ V LTHIPTGIV+ C +S +N+ +A
Sbjct: 235 EIDENDIRTDVFRSGGPGGQSVNTTDSAVRLTHIPTGIVVSCQNEKSQLQNKASA 289
>gi|386386064|ref|ZP_10071263.1| peptide chain release factor 2 [Streptomyces tsukubaensis
NRRL18488]
gi|385666472|gb|EIF90016.1| peptide chain release factor 2 [Streptomyces tsukubaensis
NRRL18488]
Length = 368
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 56/99 (56%), Gaps = 20/99 (20%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
+IDE +++ R SGPGGQ V T++ V +THIPTGIV+ C RS +N+ +A +L
Sbjct: 232 EIDESELRIDVYRASGPGGQGVNTTDSAVRITHIPTGIVVSCQNERSQIQNKASAMNVLQ 291
Query: 112 AQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKLDALK 150
A ++ E+RR QE++ R +DALK
Sbjct: 292 A-----------------KLLERRR--QEEQAR-MDALK 310
>gi|222100202|ref|YP_002534770.1| peptide chain release factor 1 [Thermotoga neapolitana DSM 4359]
gi|221572592|gb|ACM23404.1| Peptide chain release factor 1 [Thermotoga neapolitana DSM 4359]
Length = 349
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 44/70 (62%), Gaps = 7/70 (10%)
Query: 50 IPKIDEKDIQER-------FVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSEN 102
+P+I+E+DI+ R R SG GGQ V KT + V +THIPTGIV+ C RS +N
Sbjct: 190 LPEIEERDIEIRPEDLKIETFRASGHGGQYVNKTESAVRITHIPTGIVVSCQNERSQYQN 249
Query: 103 RKTARELLVA 112
++TA +L A
Sbjct: 250 KQTALRILRA 259
>gi|441523265|ref|ZP_21004893.1| peptide chain release factor 2 [Gordonia sihwensis NBRC 108236]
gi|441457115|dbj|GAC62854.1| peptide chain release factor 2 [Gordonia sihwensis NBRC 108236]
Length = 370
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 40/61 (65%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
IDE D++ R SGPGGQ+V T++ V LTH+PTGIV+ C +S +N+ A +L A
Sbjct: 235 IDENDVRVDVYRSSGPGGQSVNTTDSAVRLTHVPTGIVVTCQNEKSQLQNKVAAMRVLQA 294
Query: 113 Q 113
+
Sbjct: 295 K 295
>gi|374853598|dbj|BAL56502.1| peptide chain release factor RF-2 [uncultured alpha
proteobacterium]
Length = 336
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 40/61 (65%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
+ID KD++ R SG GGQ V +T++ V +THIPTGIV++C RS NR TA +L
Sbjct: 177 EIDPKDLRIDTYRASGAGGQHVNRTDSAVRITHIPTGIVVQCQNDRSQHRNRATAMAMLK 236
Query: 112 A 112
A
Sbjct: 237 A 237
>gi|376253852|ref|YP_005142311.1| peptide chain release factor 2 [Corynebacterium diphtheriae PW8]
gi|372116936|gb|AEX69406.1| peptide chain release factor 2 [Corynebacterium diphtheriae PW8]
Length = 369
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 49/86 (56%), Gaps = 5/86 (5%)
Query: 33 NDGYHRNLVSNIDIYSTIPKIDEKDIQERFVR-----GSGPGGQAVAKTNNCVVLTHIPT 87
N G + + I++ + + D DI + VR SGPGGQ+V T++ V LTHIPT
Sbjct: 206 NQGRRQTSFAEIEVLPVVEQTDHIDIPDSEVRVDVYRSSGPGGQSVNTTDSAVRLTHIPT 265
Query: 88 GIVIKCHQSRSLSENRKTARELLVAQ 113
GIV+ C +S +N+ +A +L A+
Sbjct: 266 GIVVTCQNEKSQIQNKASAMRVLQAK 291
>gi|350565918|ref|ZP_08934640.1| peptide chain release factor RF2 [Peptoniphilus indolicus ATCC
29427]
gi|348663296|gb|EGY79887.1| peptide chain release factor RF2 [Peptoniphilus indolicus ATCC
29427]
Length = 348
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 49/81 (60%), Gaps = 11/81 (13%)
Query: 41 VSNIDIYSTIPKID--------EKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIK 92
S++D+Y P+ID +D++ R SG GGQ V T++ V +THIPTGIV++
Sbjct: 196 FSSVDVY---PQIDGAVEVEIRAEDLKVDTYRSSGAGGQHVNTTDSAVRITHIPTGIVVQ 252
Query: 93 CHQSRSLSENRKTARELLVAQ 113
C RS +NR+TA +L A+
Sbjct: 253 CQNERSQIQNRETAMNMLKAK 273
>gi|157376591|ref|YP_001475191.1| peptide chain release factor 1 [Shewanella sediminis HAW-EB3]
gi|189039993|sp|A8FYZ0.1|RF1_SHESH RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|157318965|gb|ABV38063.1| peptide chain release factor 1 [Shewanella sediminis HAW-EB3]
Length = 361
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 55/96 (57%), Gaps = 15/96 (15%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
+I++ D++ R SG GGQ V KT++ + LTHIP+GIV++C RS +NR A +L
Sbjct: 218 EINKGDLKVDTFRASGAGGQHVNKTDSAIRLTHIPSGIVVECQDQRSQHKNRAQAMSVLT 277
Query: 112 AQWDVQVNGEDSLNAQIRRI-DEKRRATQEQKKRKL 146
A+I+ + DEKRR+ +E +R L
Sbjct: 278 --------------ARIQAVEDEKRRSAEESTRRNL 299
>gi|424864710|ref|ZP_18288613.1| peptide chain release factor 1 [SAR86 cluster bacterium SAR86B]
gi|400759456|gb|EJP73638.1| peptide chain release factor 1 [SAR86 cluster bacterium SAR86B]
Length = 361
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 41/62 (66%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
ID+ D++ R SG GGQ V KT++ V LTHIPTG+V++C RS +N++ A LL A
Sbjct: 219 IDKNDLRVDTFRASGAGGQHVNKTDSAVRLTHIPTGLVVECQDGRSQHKNKEKALSLLAA 278
Query: 113 QW 114
+
Sbjct: 279 KL 280
>gi|357389817|ref|YP_004904657.1| putative peptide chain release factor 2 [Kitasatospora setae
KM-6054]
gi|311896293|dbj|BAJ28701.1| putative peptide chain release factor 2 [Kitasatospora setae
KM-6054]
Length = 351
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 40/61 (65%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
IDE D++ R SGPGGQ V T++ V +TH+PTGIV+ C RS +N+ +A +L A
Sbjct: 217 IDEGDLRIDVYRASGPGGQGVNTTDSAVRITHLPTGIVVSCQNERSQIQNKASAMNVLQA 276
Query: 113 Q 113
+
Sbjct: 277 K 277
>gi|270159507|ref|ZP_06188163.1| putative peptide chain release factor [Legionella longbeachae
D-4968]
gi|289165692|ref|YP_003455830.1| hypothetical protein LLO_2370 [Legionella longbeachae NSW150]
gi|269987846|gb|EEZ94101.1| putative peptide chain release factor [Legionella longbeachae
D-4968]
gi|288858865|emb|CBJ12787.1| putative unknown proteins [Legionella longbeachae NSW150]
Length = 134
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 38/55 (69%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTAR 107
I+E D+ E+F+ GSG GGQ + KT + V L H P+G+ IKC +SRS +NR AR
Sbjct: 19 INEADLIEKFILGSGKGGQKLHKTASTVYLKHEPSGLEIKCQESRSREDNRYFAR 73
>gi|153002121|ref|YP_001367802.1| peptide chain release factor 1 [Shewanella baltica OS185]
gi|166223602|sp|A6WSF0.1|RF1_SHEB8 RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|151366739|gb|ABS09739.1| peptide chain release factor 1 [Shewanella baltica OS185]
Length = 363
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 54/97 (55%), Gaps = 15/97 (15%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
I+ D++ R SG GGQ V KT++ + +THIPTGIV++C RS +NR A +L
Sbjct: 219 INPADLKVDTFRSSGAGGQHVNKTDSAIRITHIPTGIVVECQDQRSQHKNRAQAMSVLA- 277
Query: 113 QWDVQVNGEDSLNAQIRRI-DEKRRATQEQKKRKLDA 148
A+I+ + DEKRR+ +E +R L A
Sbjct: 278 -------------ARIQAVEDEKRRSAEESTRRSLVA 301
>gi|326383344|ref|ZP_08205032.1| peptide chain release factor 2 [Gordonia neofelifaecis NRRL
B-59395]
gi|326198094|gb|EGD55280.1| peptide chain release factor 2 [Gordonia neofelifaecis NRRL
B-59395]
Length = 370
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 40/61 (65%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
IDE D++ R SGPGGQ+V T++ V LTH+PTGIV+ C +S +N+ A +L A
Sbjct: 235 IDENDVRVDVYRSSGPGGQSVNTTDSAVRLTHVPTGIVVTCQNEKSQLQNKVAAMRVLQA 294
Query: 113 Q 113
+
Sbjct: 295 K 295
>gi|376248040|ref|YP_005139984.1| peptide chain release factor 2 [Corynebacterium diphtheriae HC04]
gi|372114608|gb|AEX80666.1| peptide chain release factor 2 [Corynebacterium diphtheriae HC04]
Length = 405
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 49/86 (56%), Gaps = 5/86 (5%)
Query: 33 NDGYHRNLVSNIDIYSTIPKIDEKDIQERFVR-----GSGPGGQAVAKTNNCVVLTHIPT 87
N G + + I++ + + D DI + VR SGPGGQ+V T++ V LTHIPT
Sbjct: 226 NQGRRQTSFAEIEVLPVVEQTDHIDIPDSEVRVDVYRSSGPGGQSVNTTDSAVRLTHIPT 285
Query: 88 GIVIKCHQSRSLSENRKTARELLVAQ 113
GIV+ C +S +N+ +A +L A+
Sbjct: 286 GIVVTCQNEKSQIQNKASAMRVLQAK 311
>gi|376242385|ref|YP_005133237.1| peptide chain release factor 2 [Corynebacterium diphtheriae CDCE
8392]
gi|372105627|gb|AEX71689.1| peptide chain release factor 2 [Corynebacterium diphtheriae CDCE
8392]
Length = 369
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 49/86 (56%), Gaps = 5/86 (5%)
Query: 33 NDGYHRNLVSNIDIYSTIPKIDEKDIQERFVR-----GSGPGGQAVAKTNNCVVLTHIPT 87
N G + + I++ + + D DI + VR SGPGGQ+V T++ V LTHIPT
Sbjct: 206 NQGRRQTSFAEIEVLPVVEQTDHIDIPDSEVRVDVYRSSGPGGQSVNTTDSAVRLTHIPT 265
Query: 88 GIVIKCHQSRSLSENRKTARELLVAQ 113
GIV+ C +S +N+ +A +L A+
Sbjct: 266 GIVVTCQNEKSQIQNKASAMRVLQAK 291
>gi|220933707|ref|YP_002512606.1| peptide chain release factor 1 [Thioalkalivibrio sulfidophilus
HL-EbGr7]
gi|254790905|sp|B8GLA1.1|RF1_THISH RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|219995017|gb|ACL71619.1| peptide chain release factor 1 [Thioalkalivibrio sulfidophilus
HL-EbGr7]
Length = 361
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 41/63 (65%)
Query: 51 PKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELL 110
P+I+ D++ R SG GGQ V KT++ + LTH+PTGIV++C RS +NR A LL
Sbjct: 217 PEINPADLRVDTYRASGAGGQHVNKTDSAIRLTHLPTGIVVECQDERSQHKNRARAMSLL 276
Query: 111 VAQ 113
A+
Sbjct: 277 AAK 279
>gi|392297787|gb|EIW08886.1| hypothetical protein CENPK1137D_656 [Saccharomyces cerevisiae
CEN.PK113-7D]
Length = 155
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 46/75 (61%), Gaps = 5/75 (6%)
Query: 55 EKDIQERFVRGS-GPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTAR----EL 109
E E+F+ G GPGGQ + K N+ V L H PTGIV++C ++RS +NRK AR
Sbjct: 34 EAQCTEKFLHGGRGPGGQKINKCNSKVQLRHEPTGIVVECQETRSREQNRKLARLKLARE 93
Query: 110 LVAQWDVQVNGEDSL 124
L A +D ++ E++L
Sbjct: 94 LAASYDTMLSREEAL 108
>gi|392400126|ref|YP_006436726.1| peptide chain release factor 2 (RF-2) [Corynebacterium
pseudotuberculosis Cp162]
gi|390531204|gb|AFM06933.1| Peptide chain release factor 2 (RF-2) [Corynebacterium
pseudotuberculosis Cp162]
Length = 366
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 49/86 (56%), Gaps = 5/86 (5%)
Query: 33 NDGYHRNLVSNIDIYSTIPKIDEKDIQERFVR-----GSGPGGQAVAKTNNCVVLTHIPT 87
N G + + I++ + + D DI + VR SGPGGQ+V T++ V LTHIPT
Sbjct: 205 NQGRRQTSFAEIEVLPVVEQTDHIDIPDSEVRVDVYRSSGPGGQSVNTTDSAVRLTHIPT 264
Query: 88 GIVIKCHQSRSLSENRKTARELLVAQ 113
GIV+ C +S +N+ +A +L A+
Sbjct: 265 GIVVTCQNEKSQIQNKASAMRVLQAK 290
>gi|386739917|ref|YP_006213097.1| Peptide chain release factor 2 (RF-2) [Corynebacterium
pseudotuberculosis 31]
gi|384476611|gb|AFH90407.1| Peptide chain release factor 2 (RF-2) [Corynebacterium
pseudotuberculosis 31]
Length = 366
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 49/86 (56%), Gaps = 5/86 (5%)
Query: 33 NDGYHRNLVSNIDIYSTIPKIDEKDIQERFVR-----GSGPGGQAVAKTNNCVVLTHIPT 87
N G + + I++ + + D DI + VR SGPGGQ+V T++ V LTHIPT
Sbjct: 205 NQGRRQTSFAEIEVLPVVEQTDHIDIPDSEVRVDVYRSSGPGGQSVNTTDSAVRLTHIPT 264
Query: 88 GIVIKCHQSRSLSENRKTARELLVAQ 113
GIV+ C +S +N+ +A +L A+
Sbjct: 265 GIVVTCQNEKSQIQNKASAMRVLQAK 290
>gi|38233352|ref|NP_939119.1| peptide chain release factor 2 [Corynebacterium diphtheriae NCTC
13129]
gi|375292628|ref|YP_005127167.1| peptide chain release factor 2 [Corynebacterium diphtheriae INCA
402]
gi|376289900|ref|YP_005162147.1| peptide chain release factor 2 [Corynebacterium diphtheriae C7
(beta)]
gi|376292796|ref|YP_005164470.1| peptide chain release factor 2 [Corynebacterium diphtheriae HC02]
gi|76363349|sp|Q6NIM2.1|RF2_CORDI RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|38199612|emb|CAE49268.1| peptide chain release factor 2 [Corynebacterium diphtheriae]
gi|371582299|gb|AEX45965.1| peptide chain release factor 2 [Corynebacterium diphtheriae INCA
402]
gi|372103296|gb|AEX66893.1| peptide chain release factor 2 [Corynebacterium diphtheriae C7
(beta)]
gi|372110119|gb|AEX76179.1| peptide chain release factor 2 [Corynebacterium diphtheriae HC02]
Length = 369
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 49/88 (55%), Gaps = 5/88 (5%)
Query: 31 LRNDGYHRNLVSNIDIYSTIPKIDEKDIQERFVR-----GSGPGGQAVAKTNNCVVLTHI 85
N G + + I++ + + D DI + VR SGPGGQ+V T++ V LTHI
Sbjct: 204 FDNQGRRQTSFAEIEVLPVVEQTDHIDIPDSEVRVDVYRSSGPGGQSVNTTDSAVRLTHI 263
Query: 86 PTGIVIKCHQSRSLSENRKTARELLVAQ 113
PTGIV+ C +S +N+ +A +L A+
Sbjct: 264 PTGIVVTCQNEKSQIQNKASAMRVLQAK 291
>gi|419860362|ref|ZP_14383006.1| peptide chain release factor 2 [Corynebacterium diphtheriae bv.
intermedius str. NCTC 5011]
gi|387983171|gb|EIK56662.1| peptide chain release factor 2 [Corynebacterium diphtheriae bv.
intermedius str. NCTC 5011]
Length = 369
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 49/88 (55%), Gaps = 5/88 (5%)
Query: 31 LRNDGYHRNLVSNIDIYSTIPKIDEKDIQERFVR-----GSGPGGQAVAKTNNCVVLTHI 85
N G + + I++ + + D DI + VR SGPGGQ+V T++ V LTHI
Sbjct: 204 FDNQGRRQTSFAEIEVLPVVEQTDHIDIPDSEVRVDVYRSSGPGGQSVNTTDSAVRLTHI 263
Query: 86 PTGIVIKCHQSRSLSENRKTARELLVAQ 113
PTGIV+ C +S +N+ +A +L A+
Sbjct: 264 PTGIVVTCQNEKSQIQNKASAMRVLQAK 291
>gi|376250835|ref|YP_005137716.1| peptide chain release factor 2 [Corynebacterium diphtheriae HC03]
gi|372112339|gb|AEX78398.1| peptide chain release factor 2 [Corynebacterium diphtheriae HC03]
Length = 369
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 49/88 (55%), Gaps = 5/88 (5%)
Query: 31 LRNDGYHRNLVSNIDIYSTIPKIDEKDIQERFVR-----GSGPGGQAVAKTNNCVVLTHI 85
N G + + I++ + + D DI + VR SGPGGQ+V T++ V LTHI
Sbjct: 204 FDNQGRRQTSFAEIEVLPVVEQTDHIDIPDSEVRVDVYRSSGPGGQSVNTTDSAVRLTHI 263
Query: 86 PTGIVIKCHQSRSLSENRKTARELLVAQ 113
PTGIV+ C +S +N+ +A +L A+
Sbjct: 264 PTGIVVTCQNEKSQIQNKASAMRVLQAK 291
>gi|376287261|ref|YP_005159827.1| peptide chain release factor 2 [Corynebacterium diphtheriae BH8]
gi|371584595|gb|AEX48260.1| peptide chain release factor 2 [Corynebacterium diphtheriae BH8]
Length = 369
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 49/88 (55%), Gaps = 5/88 (5%)
Query: 31 LRNDGYHRNLVSNIDIYSTIPKIDEKDIQERFVR-----GSGPGGQAVAKTNNCVVLTHI 85
N G + + I++ + + D DI + VR SGPGGQ+V T++ V LTHI
Sbjct: 204 FDNQGRRQTSFAEIEVLPVVEQTDHIDIPDSEVRVDVYRSSGPGGQSVNTTDSAVRLTHI 263
Query: 86 PTGIVIKCHQSRSLSENRKTARELLVAQ 113
PTGIV+ C +S +N+ +A +L A+
Sbjct: 264 PTGIVVTCQNEKSQIQNKASAMRVLQAK 291
>gi|375290410|ref|YP_005124950.1| peptide chain release factor 2 [Corynebacterium diphtheriae 241]
gi|376245243|ref|YP_005135482.1| peptide chain release factor 2 [Corynebacterium diphtheriae HC01]
gi|371580081|gb|AEX43748.1| peptide chain release factor 2 [Corynebacterium diphtheriae 241]
gi|372107873|gb|AEX73934.1| peptide chain release factor 2 [Corynebacterium diphtheriae HC01]
Length = 369
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 49/88 (55%), Gaps = 5/88 (5%)
Query: 31 LRNDGYHRNLVSNIDIYSTIPKIDEKDIQERFVR-----GSGPGGQAVAKTNNCVVLTHI 85
N G + + I++ + + D DI + VR SGPGGQ+V T++ V LTHI
Sbjct: 204 FDNQGRRQTSFAEIEVLPVVEQTDHIDIPDSEVRVDVYRSSGPGGQSVNTTDSAVRLTHI 263
Query: 86 PTGIVIKCHQSRSLSENRKTARELLVAQ 113
PTGIV+ C +S +N+ +A +L A+
Sbjct: 264 PTGIVVTCQNEKSQIQNKASAMRVLQAK 291
>gi|158321505|ref|YP_001514012.1| peptide chain release factor 2 [Alkaliphilus oremlandii OhILAs]
gi|158141704|gb|ABW20016.1| peptide chain release factor 2 [Alkaliphilus oremlandii OhILAs]
Length = 340
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 43/62 (69%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
+I+ D++ R SG GGQ V KT++ V +THIPTGIV++C RS NR+TA ++L+
Sbjct: 203 QINPNDLRIDTYRASGSGGQHVNKTDSAVRITHIPTGIVVQCQNERSQHSNRETAMKMLI 262
Query: 112 AQ 113
++
Sbjct: 263 SK 264
>gi|376284273|ref|YP_005157483.1| peptide chain release factor 2 [Corynebacterium diphtheriae 31A]
gi|371577788|gb|AEX41456.1| peptide chain release factor 2 [Corynebacterium diphtheriae 31A]
Length = 369
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 49/88 (55%), Gaps = 5/88 (5%)
Query: 31 LRNDGYHRNLVSNIDIYSTIPKIDEKDIQERFVR-----GSGPGGQAVAKTNNCVVLTHI 85
N G + + I++ + + D DI + VR SGPGGQ+V T++ V LTHI
Sbjct: 204 FDNQGRRQTSFAEIEVLPVVEQTDHIDIPDSEVRVDVYRSSGPGGQSVNTTDSAVRLTHI 263
Query: 86 PTGIVIKCHQSRSLSENRKTARELLVAQ 113
PTGIV+ C +S +N+ +A +L A+
Sbjct: 264 PTGIVVTCQNEKSQIQNKASAMRVLQAK 291
>gi|325849490|ref|ZP_08170771.1| peptide chain release factor 2 [Anaerococcus hydrogenalis
ACS-025-V-Sch4]
gi|325480110|gb|EGC83185.1| peptide chain release factor 2 [Anaerococcus hydrogenalis
ACS-025-V-Sch4]
Length = 369
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 50/78 (64%), Gaps = 5/78 (6%)
Query: 41 VSNIDIYSTIP-----KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQ 95
++IDI+ + +ID KD++ R SG GGQ V KT++ V +THIPTG++
Sbjct: 218 FASIDIFPELNDDMSVEIDPKDLRIDTYRASGAGGQHVNKTDSAVRITHIPTGVIASSQA 277
Query: 96 SRSLSENRKTARELLVAQ 113
RS ++N++TA +LL+A+
Sbjct: 278 ERSQTQNKETAMKLLLAK 295
>gi|422439333|ref|ZP_16516156.1| peptide chain release factor 1 [Propionibacterium acnes HL037PA3]
gi|422470819|ref|ZP_16547319.1| peptide chain release factor 1 [Propionibacterium acnes HL037PA2]
gi|313837661|gb|EFS75375.1| peptide chain release factor 1 [Propionibacterium acnes HL037PA2]
gi|314972601|gb|EFT16698.1| peptide chain release factor 1 [Propionibacterium acnes HL037PA3]
Length = 388
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 41/69 (59%)
Query: 45 DIYSTIPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRK 104
D+ T ID DI+ R SGPGGQ V T++ V LTH+PTGIV+ C RS +N+
Sbjct: 235 DVDETEVDIDPADIRVDVYRSSGPGGQGVNTTDSAVRLTHLPTGIVVSCQNERSQLQNKA 294
Query: 105 TARELLVAQ 113
A +L A+
Sbjct: 295 EAMRMLRAK 303
>gi|163795148|ref|ZP_02189116.1| Protein chain release factor B [alpha proteobacterium BAL199]
gi|159179546|gb|EDP64075.1| Protein chain release factor B [alpha proteobacterium BAL199]
Length = 322
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 54/90 (60%), Gaps = 9/90 (10%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
+++KD++ R SG GGQ V +T++ + +TH+P+GIV++C RS NR TA E+L A
Sbjct: 178 VEDKDLKVDTYRASGAGGQHVNRTDSAIRITHLPSGIVVQCQADRSQHRNRATAMEMLKA 237
Query: 113 QWDVQVNGEDSLNAQIRRIDEKRRATQEQK 142
+ A+++R +E+ AT+ K
Sbjct: 238 RL---------YEAELKRREEEASATEATK 258
>gi|345000024|ref|YP_004802878.1| peptide chain release factor 2 [Streptomyces sp. SirexAA-E]
gi|344315650|gb|AEN10338.1| peptide chain release factor 2 [Streptomyces sp. SirexAA-E]
Length = 352
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 41/62 (66%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
+IDE +++ R SGPGGQ V T++ V LTH+PTGIV+ C RS +N+ +A +L
Sbjct: 216 EIDESELRVDVYRSSGPGGQGVNTTDSAVRLTHLPTGIVVSCQNERSQIQNKASAMNVLQ 275
Query: 112 AQ 113
A+
Sbjct: 276 AK 277
>gi|303233066|ref|ZP_07319741.1| peptide chain release factor 2 [Atopobium vaginae PB189-T1-4]
gi|302480841|gb|EFL43926.1| peptide chain release factor 2 [Atopobium vaginae PB189-T1-4]
Length = 420
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 60/109 (55%), Gaps = 13/109 (11%)
Query: 17 GIR---LLESQVTITRELR---NDGYHR--NLVSNIDIYSTIPK-----IDEKDIQERFV 63
G+R +L+++ + R +R D HR + +++ +P+ I+ +D++
Sbjct: 234 GVRAYGMLKAEAGVHRLVRISPTDAKHRRQTTFAGVEVIPVLPEETDVEINPQDVRVDVF 293
Query: 64 RGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
SGPGGQ V T++ V LTH+P+GIV+ C RS +N+ A E+L A
Sbjct: 294 HASGPGGQGVNTTDSAVRLTHMPSGIVVSCQNERSQLQNKAAAMEILKA 342
>gi|297202390|ref|ZP_06919787.1| peptide chain release factor 1 [Streptomyces sviceus ATCC 29083]
gi|197710089|gb|EDY54123.1| peptide chain release factor 1 [Streptomyces sviceus ATCC 29083]
Length = 358
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 51/87 (58%), Gaps = 6/87 (6%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTA----- 106
+I+ D++ R SGPGGQ+V T++ V +THIPTG+V C +S +N++ A
Sbjct: 218 EINPNDLRIDVYRSSGPGGQSVNTTDSAVRITHIPTGVVASCQNEKSQLQNKEQALRILR 277
Query: 107 -RELLVAQWDVQVNGEDSLNAQIRRID 132
R L AQ + + N D+ +Q+R +D
Sbjct: 278 SRLLAAAQEEAERNAADARRSQVRTVD 304
>gi|269797862|ref|YP_003311762.1| peptide chain release factor 2 [Veillonella parvula DSM 2008]
gi|269094491|gb|ACZ24482.1| bacterial peptide chain release factor 2 (bRF- 2) [Veillonella
parvula DSM 2008]
Length = 368
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 49/77 (63%), Gaps = 1/77 (1%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
ID KD+Q R SG GGQ + KT++ V +TH PTGIV++C RS +NR+ A LL A
Sbjct: 232 IDMKDVQVDTYRASGAGGQHINKTDSAVRMTHKPTGIVVQCQTQRSQMQNREQALRLLRA 291
Query: 113 Q-WDVQVNGEDSLNAQI 128
+ +++++ + L QI
Sbjct: 292 KLFELELEKQAELKEQI 308
>gi|118464752|ref|YP_880755.1| peptide chain release factor 1 [Mycobacterium avium 104]
gi|166223570|sp|A0QCW7.1|RF1_MYCA1 RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|118166039|gb|ABK66936.1| peptide chain release factor 1 [Mycobacterium avium 104]
Length = 357
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 52/91 (57%), Gaps = 6/91 (6%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
+IDE D++ R SG GGQ V T++ V +TH+PTG+V+ C RS +N+ A ++L
Sbjct: 217 QIDESDLRIDVFRSSGKGGQGVNTTDSAVRITHLPTGVVVTCQNERSQLQNKARALQVLA 276
Query: 112 AQWDV----QVNGEDSLN--AQIRRIDEKRR 136
A+ Q + E S + +QIR +D R
Sbjct: 277 ARLQAMAEEQASAEASADRASQIRTVDRSER 307
>gi|41408560|ref|NP_961396.1| peptide chain release factor 1 [Mycobacterium avium subsp.
paratuberculosis K-10]
gi|254774338|ref|ZP_05215854.1| peptide chain release factor 1 [Mycobacterium avium subsp. avium
ATCC 25291]
gi|417747546|ref|ZP_12396012.1| peptide chain release factor 1 [Mycobacterium avium subsp.
paratuberculosis S397]
gi|440776169|ref|ZP_20955020.1| peptide chain release factor 1 [Mycobacterium avium subsp.
paratuberculosis S5]
gi|61214644|sp|Q73X48.1|RF1_MYCPA RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|41396918|gb|AAS04779.1| PrfA [Mycobacterium avium subsp. paratuberculosis K-10]
gi|336460910|gb|EGO39793.1| peptide chain release factor 1 [Mycobacterium avium subsp.
paratuberculosis S397]
gi|436723884|gb|ELP47660.1| peptide chain release factor 1 [Mycobacterium avium subsp.
paratuberculosis S5]
Length = 357
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 52/91 (57%), Gaps = 6/91 (6%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
+IDE D++ R SG GGQ V T++ V +TH+PTG+V+ C RS +N+ A ++L
Sbjct: 217 QIDESDLRIDVFRSSGKGGQGVNTTDSAVRITHLPTGVVVTCQNERSQLQNKARALQVLA 276
Query: 112 AQWDV----QVNGEDSLN--AQIRRIDEKRR 136
A+ Q + E S + +QIR +D R
Sbjct: 277 ARLQAMAEEQASAEASADRASQIRTVDRSER 307
>gi|294791755|ref|ZP_06756903.1| peptide chain release factor 2 [Veillonella sp. 6_1_27]
gi|294793616|ref|ZP_06758753.1| peptide chain release factor 2 [Veillonella sp. 3_1_44]
gi|416999056|ref|ZP_11939725.1| peptide chain release factor 2 [Veillonella parvula
ACS-068-V-Sch12]
gi|294455186|gb|EFG23558.1| peptide chain release factor 2 [Veillonella sp. 3_1_44]
gi|294456985|gb|EFG25347.1| peptide chain release factor 2 [Veillonella sp. 6_1_27]
gi|333977209|gb|EGL78068.1| peptide chain release factor 2 [Veillonella parvula
ACS-068-V-Sch12]
Length = 330
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 49/77 (63%), Gaps = 1/77 (1%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
ID KD+Q R SG GGQ + KT++ V +TH PTGIV++C RS +NR+ A LL A
Sbjct: 194 IDMKDVQVDTYRASGAGGQHINKTDSAVRMTHKPTGIVVQCQTQRSQMQNREQALRLLRA 253
Query: 113 Q-WDVQVNGEDSLNAQI 128
+ +++++ + L QI
Sbjct: 254 KLFELELEKQAELKEQI 270
>gi|406998514|gb|EKE16445.1| hypothetical protein ACD_11C00017G0035 [uncultured bacterium]
Length = 331
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 49/76 (64%), Gaps = 2/76 (2%)
Query: 40 LVSNIDIYSTIP--KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSR 97
LV + I S I KI+EKD++ R SG GGQ+V T++ V +THIPTG V+ C R
Sbjct: 182 LVEILPIISEISEVKIEEKDLRVDVYRSSGAGGQSVNTTDSAVRVTHIPTGTVVTCQNER 241
Query: 98 SLSENRKTARELLVAQ 113
S +N+++A ++L A+
Sbjct: 242 SQLQNKESAMKILKAK 257
>gi|417986507|ref|ZP_12627075.1| peptide chain release factor 1 [Lactobacillus casei 32G]
gi|410525562|gb|EKQ00462.1| peptide chain release factor 1 [Lactobacillus casei 32G]
Length = 359
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 38/59 (64%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELL 110
KID KDI+ R SG GGQ V KT++ V +THIP+GIV+ RS ENR A ++L
Sbjct: 217 KIDPKDIRTDVYRSSGAGGQHVNKTSSAVRMTHIPSGIVVSMQDERSQQENRARAMQIL 275
>gi|418720338|ref|ZP_13279536.1| peptide chain release factor 2 [Leptospira borgpetersenii str. UI
09149]
gi|418735369|ref|ZP_13291780.1| peptide chain release factor 2 [Leptospira borgpetersenii serovar
Castellonis str. 200801910]
gi|421094064|ref|ZP_15554785.1| peptide chain release factor 2 [Leptospira borgpetersenii str.
200801926]
gi|410363205|gb|EKP14237.1| peptide chain release factor 2 [Leptospira borgpetersenii str.
200801926]
gi|410743316|gb|EKQ92059.1| peptide chain release factor 2 [Leptospira borgpetersenii str. UI
09149]
gi|410748990|gb|EKR01883.1| peptide chain release factor 2 [Leptospira borgpetersenii serovar
Castellonis str. 200801910]
gi|456890986|gb|EMG01739.1| peptide chain release factor 2 [Leptospira borgpetersenii str.
200701203]
Length = 367
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 41/61 (67%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
KI+EKDI+ R SG GGQ V T++ V +TH+P+GIV+ C RS +NR TA ++L
Sbjct: 235 KIEEKDIRVDVYRSSGAGGQHVNTTDSAVRITHLPSGIVVACQNERSQIKNRDTAFKMLK 294
Query: 112 A 112
A
Sbjct: 295 A 295
>gi|419716581|ref|ZP_14243977.1| peptide chain release factor 1 [Mycobacterium abscessus M94]
gi|382940867|gb|EIC65189.1| peptide chain release factor 1 [Mycobacterium abscessus M94]
Length = 356
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 50/91 (54%), Gaps = 6/91 (6%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELL- 110
+IDE D++ R SG GGQ V T++ V +TH+PTGIV+ C RS +N+ A ++L
Sbjct: 216 QIDESDLRIDVYRSSGKGGQGVNTTDSAVRITHLPTGIVVTCQNERSQLQNKARAMQVLA 275
Query: 111 -----VAQWDVQVNGEDSLNAQIRRIDEKRR 136
+A+ Q + +QIR +D R
Sbjct: 276 ARLQALAEEQAQADASAGRASQIRTVDRSER 306
>gi|383786439|ref|YP_005471008.1| peptide chain release factor 1 (bRF-1) [Fervidobacterium
pennivorans DSM 9078]
gi|383109286|gb|AFG34889.1| bacterial peptide chain release factor 1 (bRF-1) [Fervidobacterium
pennivorans DSM 9078]
Length = 349
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 43/70 (61%), Gaps = 5/70 (7%)
Query: 41 VSNIDIYSTIPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLS 100
+ ++DIY ID KDI+ R SG GGQ V KT + V +TH+PTGIV+ C RS
Sbjct: 195 IKDVDIY-----IDPKDIRIDTYRASGAGGQYVNKTESAVRITHLPTGIVVTCQSERSQH 249
Query: 101 ENRKTARELL 110
+N++ A +L
Sbjct: 250 QNKEKAMMVL 259
>gi|282848898|ref|ZP_06258288.1| peptide chain release factor 2 [Veillonella parvula ATCC 17745]
gi|282581403|gb|EFB86796.1| peptide chain release factor 2 [Veillonella parvula ATCC 17745]
Length = 330
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 49/77 (63%), Gaps = 1/77 (1%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
ID KD+Q R SG GGQ + KT++ V +TH PTGIV++C RS +NR+ A LL A
Sbjct: 194 IDMKDVQVDTYRASGAGGQHINKTDSAVRMTHKPTGIVVQCQTQRSQMQNREQALRLLRA 253
Query: 113 Q-WDVQVNGEDSLNAQI 128
+ +++++ + L QI
Sbjct: 254 KLFELELEKQAELKEQI 270
>gi|116494651|ref|YP_806385.1| peptide chain release factor 1 [Lactobacillus casei ATCC 334]
gi|191638150|ref|YP_001987316.1| peptide chain release factor 1 [Lactobacillus casei BL23]
gi|227535366|ref|ZP_03965415.1| peptide chain release factor RF1 [Lactobacillus paracasei subsp.
paracasei ATCC 25302]
gi|239631748|ref|ZP_04674779.1| peptide chain release factor 1 [Lactobacillus paracasei subsp.
paracasei 8700:2]
gi|301066209|ref|YP_003788232.1| protein chain release factor A [Lactobacillus casei str. Zhang]
gi|385819853|ref|YP_005856240.1| peptide chain release factor 1 (bRF-1) [Lactobacillus casei LC2W]
gi|385823050|ref|YP_005859392.1| peptide chain release factor 1 (bRF-1) [Lactobacillus casei BD-II]
gi|409997016|ref|YP_006751417.1| peptide chain release factor 1 [Lactobacillus casei W56]
gi|417980467|ref|ZP_12621147.1| peptide chain release factor 1 [Lactobacillus casei 12A]
gi|417983234|ref|ZP_12623873.1| peptide chain release factor 1 [Lactobacillus casei 21/1]
gi|417989400|ref|ZP_12629906.1| peptide chain release factor 1 [Lactobacillus casei A2-362]
gi|417992673|ref|ZP_12633026.1| peptide chain release factor 1 [Lactobacillus casei CRF28]
gi|417996010|ref|ZP_12636295.1| peptide chain release factor 1 [Lactobacillus casei M36]
gi|418001796|ref|ZP_12641927.1| peptide chain release factor 1 [Lactobacillus casei UCD174]
gi|418004869|ref|ZP_12644875.1| peptide chain release factor 1 [Lactobacillus casei UW1]
gi|418010581|ref|ZP_12650356.1| peptide chain release factor 1 [Lactobacillus casei Lc-10]
gi|418012422|ref|ZP_12652138.1| peptide chain release factor 1 [Lactobacillus casei Lpc-37]
gi|122263928|sp|Q03A29.1|RF1_LACC3 RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|238693030|sp|B3WDK7.1|RF1_LACCB RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|116104801|gb|ABJ69943.1| bacterial peptide chain release factor 1 (bRF-1) [Lactobacillus
casei ATCC 334]
gi|190712452|emb|CAQ66458.1| Peptide chain release factor 1 (RF-1) [Lactobacillus casei BL23]
gi|227186962|gb|EEI67029.1| peptide chain release factor RF1 [Lactobacillus paracasei subsp.
paracasei ATCC 25302]
gi|239526213|gb|EEQ65214.1| peptide chain release factor 1 [Lactobacillus paracasei subsp.
paracasei 8700:2]
gi|300438616|gb|ADK18382.1| Protein chain release factor A [Lactobacillus casei str. Zhang]
gi|327382180|gb|AEA53656.1| bacterial peptide chain release factor 1 (bRF-1) [Lactobacillus
casei LC2W]
gi|327385377|gb|AEA56851.1| bacterial peptide chain release factor 1 (bRF-1) [Lactobacillus
casei BD-II]
gi|406358028|emb|CCK22298.1| Peptide chain release factor 1 [Lactobacillus casei W56]
gi|410524790|gb|EKP99697.1| peptide chain release factor 1 [Lactobacillus casei 12A]
gi|410528654|gb|EKQ03502.1| peptide chain release factor 1 [Lactobacillus casei 21/1]
gi|410532874|gb|EKQ07569.1| peptide chain release factor 1 [Lactobacillus casei CRF28]
gi|410536163|gb|EKQ10763.1| peptide chain release factor 1 [Lactobacillus casei M36]
gi|410538489|gb|EKQ13042.1| peptide chain release factor 1 [Lactobacillus casei A2-362]
gi|410545609|gb|EKQ19899.1| peptide chain release factor 1 [Lactobacillus casei UCD174]
gi|410548440|gb|EKQ22641.1| peptide chain release factor 1 [Lactobacillus casei UW1]
gi|410553821|gb|EKQ27814.1| peptide chain release factor 1 [Lactobacillus casei Lc-10]
gi|410556839|gb|EKQ30698.1| peptide chain release factor 1 [Lactobacillus casei Lpc-37]
Length = 359
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 38/59 (64%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELL 110
KID KDI+ R SG GGQ V KT++ V +THIP+GIV+ RS ENR A ++L
Sbjct: 217 KIDPKDIRTDVYRSSGAGGQHVNKTSSAVRMTHIPSGIVVSMQDERSQQENRARAMQIL 275
>gi|451341196|ref|ZP_21911663.1| Peptide chain release factor 2 [Amycolatopsis azurea DSM 43854]
gi|449415922|gb|EMD21722.1| Peptide chain release factor 2 [Amycolatopsis azurea DSM 43854]
Length = 370
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 40/60 (66%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
I EKDI+ R SGPGGQ+V T++ V +THIPTG+V+ C +S +N+ A ++L A
Sbjct: 235 IPEKDIRVDVYRSSGPGGQSVNTTDSAVRITHIPTGVVVSCQNEKSQLQNKAAAMKVLQA 294
>gi|417998865|ref|ZP_12639079.1| peptide chain release factor 1 [Lactobacillus casei T71499]
gi|410540195|gb|EKQ14713.1| peptide chain release factor 1 [Lactobacillus casei T71499]
Length = 359
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 38/59 (64%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELL 110
KID KDI+ R SG GGQ V KT++ V +THIP+GIV+ RS ENR A ++L
Sbjct: 217 KIDPKDIRTDVYRSSGAGGQHVNKTSSAVRMTHIPSGIVVSMQDERSQQENRARAMQIL 275
>gi|229491026|ref|ZP_04384859.1| peptide chain release factor 2 [Rhodococcus erythropolis SK121]
gi|453069985|ref|ZP_21973238.1| peptide chain release factor 2 [Rhodococcus qingshengii BKS 20-40]
gi|259585230|sp|C0ZXD0.1|RF2_RHOE4 RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|226184911|dbj|BAH33015.1| peptide chain release factor 2 [Rhodococcus erythropolis PR4]
gi|229322142|gb|EEN87930.1| peptide chain release factor 2 [Rhodococcus erythropolis SK121]
gi|452762530|gb|EME20826.1| peptide chain release factor 2 [Rhodococcus qingshengii BKS 20-40]
Length = 368
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 42/62 (67%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
+I+E DI+ R SGPGGQ+V T++ V LTHIPTGIV+ C +S +N+ +A +L
Sbjct: 230 EINENDIRVDVYRSSGPGGQSVNTTDSAVRLTHIPTGIVVTCQNEKSQLQNKVSAMRVLQ 289
Query: 112 AQ 113
A+
Sbjct: 290 AK 291
>gi|383819873|ref|ZP_09975137.1| peptide chain release factor 1 [Mycobacterium phlei RIVM601174]
gi|383336000|gb|EID14412.1| peptide chain release factor 1 [Mycobacterium phlei RIVM601174]
Length = 355
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 51/91 (56%), Gaps = 6/91 (6%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
+IDE D++ R SG GGQ V T++ V +TH+PTGIV+ C RS +N+ A ++L
Sbjct: 215 QIDENDLRIDVYRSSGKGGQGVNTTDSAVRITHLPTGIVVTCQNERSQLQNKARAMQVLA 274
Query: 112 AQWDV----QVNGEDSLN--AQIRRIDEKRR 136
A+ Q E S + +QIR +D R
Sbjct: 275 ARLQALAEEQAQAEASADRASQIRTVDRSER 305
>gi|374587364|ref|ZP_09660456.1| bacterial peptide chain release factor 1 (bRF-1) [Leptonema illini
DSM 21528]
gi|373876225|gb|EHQ08219.1| bacterial peptide chain release factor 1 (bRF-1) [Leptonema illini
DSM 21528]
Length = 364
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/59 (49%), Positives = 39/59 (66%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELL 110
++DEKD++ R SG GGQ V KT + V LTHIPTG+V+ C RS +NR A ++L
Sbjct: 218 ELDEKDLRVDVYRASGAGGQHVNKTESAVRLTHIPTGLVVTCQDERSQHKNRAKAMKVL 276
>gi|359684765|ref|ZP_09254766.1| peptide chain release factor 2 [Leptospira santarosai str.
2000030832]
Length = 335
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 41/61 (67%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
KI+EKDI+ R SG GGQ V T++ V +TH+P+GIV+ C RS +NR TA ++L
Sbjct: 235 KIEEKDIRVDVYRSSGAGGQHVNTTDSAVRITHLPSGIVVACQNERSQIKNRDTAFKMLK 294
Query: 112 A 112
A
Sbjct: 295 A 295
>gi|126172944|ref|YP_001049093.1| peptide chain release factor 1 [Shewanella baltica OS155]
gi|217974700|ref|YP_002359451.1| peptide chain release factor 1 [Shewanella baltica OS223]
gi|386339746|ref|YP_006036112.1| Peptide chain release factor 1 [Shewanella baltica OS117]
gi|166223601|sp|A3D0G1.1|RF1_SHEB5 RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|254790896|sp|B8E815.1|RF1_SHEB2 RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|125996149|gb|ABN60224.1| bacterial peptide chain release factor 1 (bRF-1) [Shewanella
baltica OS155]
gi|217499835|gb|ACK48028.1| peptide chain release factor 1 [Shewanella baltica OS223]
gi|334862147|gb|AEH12618.1| Peptide chain release factor 1 [Shewanella baltica OS117]
Length = 363
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 54/97 (55%), Gaps = 15/97 (15%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
I+ D++ R SG GGQ V KT++ + +THIPTGIV++C RS +NR A +L
Sbjct: 219 INPADLKVDTFRSSGAGGQHVNKTDSAIRITHIPTGIVVECQDQRSQHKNRAQAMSVLA- 277
Query: 113 QWDVQVNGEDSLNAQIRRI-DEKRRATQEQKKRKLDA 148
A+I+ + DEKRR+ +E +R L A
Sbjct: 278 -------------ARIQALEDEKRRSAEESTRRSLVA 301
>gi|418007783|ref|ZP_12647657.1| peptide chain release factor 1 [Lactobacillus casei UW4]
gi|410548165|gb|EKQ22380.1| peptide chain release factor 1 [Lactobacillus casei UW4]
Length = 359
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 38/59 (64%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELL 110
KID KDI+ R SG GGQ V KT++ V +THIP+GIV+ RS ENR A ++L
Sbjct: 217 KIDPKDIRTDVYRSSGAGGQHVNKTSSAVRMTHIPSGIVVSMQDERSQQENRARAMQIL 275
>gi|254557155|ref|YP_003063572.1| peptide chain release factor 1 [Lactobacillus plantarum JDM1]
gi|300766721|ref|ZP_07076638.1| peptide chain release factor RF1 [Lactobacillus plantarum subsp.
plantarum ATCC 14917]
gi|308181160|ref|YP_003925288.1| peptide chain release factor 1 [Lactobacillus plantarum subsp.
plantarum ST-III]
gi|380033087|ref|YP_004890078.1| peptide chain release factor 1 [Lactobacillus plantarum WCFS1]
gi|418275886|ref|ZP_12891209.1| peptide chain release factor 1 [Lactobacillus plantarum subsp.
plantarum NC8]
gi|448821870|ref|YP_007415032.1| Peptide chain release factor 1 [Lactobacillus plantarum ZJ316]
gi|32171522|sp|Q88UT2.1|RF1_LACPL RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|254046082|gb|ACT62875.1| peptide chain release factor 1 [Lactobacillus plantarum JDM1]
gi|300495821|gb|EFK30972.1| peptide chain release factor RF1 [Lactobacillus plantarum subsp.
plantarum ATCC 14917]
gi|308046651|gb|ADN99194.1| peptide chain release factor 1 [Lactobacillus plantarum subsp.
plantarum ST-III]
gi|342242330|emb|CCC79564.1| peptide chain release factor 1 [Lactobacillus plantarum WCFS1]
gi|376009437|gb|EHS82766.1| peptide chain release factor 1 [Lactobacillus plantarum subsp.
plantarum NC8]
gi|448275367|gb|AGE39886.1| Peptide chain release factor 1 [Lactobacillus plantarum ZJ316]
Length = 360
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 39/60 (65%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
ID+KDI+ R SG GGQ + KT++ V +TH+PTGIV+ RS +NR A E+L A
Sbjct: 218 IDQKDIRTDVFRSSGAGGQHINKTSSAVRMTHLPTGIVVSMQDQRSQQQNRAKAMEILRA 277
>gi|227487967|ref|ZP_03918283.1| peptide chain release factor 1 [Corynebacterium glucuronolyticum
ATCC 51867]
gi|227542608|ref|ZP_03972657.1| peptide chain release factor 1 [Corynebacterium glucuronolyticum
ATCC 51866]
gi|227092058|gb|EEI27370.1| peptide chain release factor 1 [Corynebacterium glucuronolyticum
ATCC 51867]
gi|227181806|gb|EEI62778.1| peptide chain release factor 1 [Corynebacterium glucuronolyticum
ATCC 51866]
Length = 358
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 41/61 (67%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
+IDEKDI+ R SG GGQ V T++ V LTH+PTGI++ C + RS +N+ A ++L
Sbjct: 217 EIDEKDIRVDVYRSSGKGGQGVNTTDSAVRLTHLPTGIIVTCQKERSQIQNKARAMQVLQ 276
Query: 112 A 112
A
Sbjct: 277 A 277
>gi|15606216|ref|NP_213594.1| peptide chain release factor 1 [Aquifex aeolicus VF5]
gi|6225940|sp|O67032.1|RF1_AQUAE RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|2983407|gb|AAC06991.1| peptide chain release factor RF-1 [Aquifex aeolicus VF5]
Length = 362
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 58/115 (50%), Gaps = 20/115 (17%)
Query: 18 IRLLESQVTITRELRNDGYHR-----------NLVSNIDIYSTIPKIDEKDIQ------- 59
I L+E + +R G HR + ++ + +P++DE DI+
Sbjct: 166 IALIEGEGAYSRLKYESGVHRVQRVPVTESSGRIHTSTATVAVLPEVDETDIKIKPEELK 225
Query: 60 -ERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVAQ 113
E F R SG GGQ V T V +THIPTGIV++C RS +N++ A ++L A+
Sbjct: 226 IETF-RASGAGGQYVNTTETAVRITHIPTGIVVQCQDERSQFQNKQKALKILYAK 279
>gi|421100863|ref|ZP_15561482.1| peptide chain release factor 2 [Leptospira borgpetersenii str.
200901122]
gi|410796048|gb|EKR98188.1| peptide chain release factor 2 [Leptospira borgpetersenii str.
200901122]
Length = 367
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 41/61 (67%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
KI+EKDI+ R SG GGQ V T++ V +TH+P+GIV+ C RS +NR TA ++L
Sbjct: 235 KIEEKDIRVDVYRSSGAGGQHVNTTDSAVRITHLPSGIVVACQNERSQIKNRDTAFKMLK 294
Query: 112 A 112
A
Sbjct: 295 A 295
>gi|303229877|ref|ZP_07316653.1| peptide chain release factor 2 [Veillonella atypica
ACS-134-V-Col7a]
gi|303232076|ref|ZP_07318779.1| peptide chain release factor 2 [Veillonella atypica ACS-049-V-Sch6]
gi|401679864|ref|ZP_10811788.1| peptide chain release factor 2 [Veillonella sp. ACP1]
gi|302513182|gb|EFL55221.1| peptide chain release factor 2 [Veillonella atypica ACS-049-V-Sch6]
gi|302515433|gb|EFL57399.1| peptide chain release factor 2 [Veillonella atypica
ACS-134-V-Col7a]
gi|400218991|gb|EJO49862.1| peptide chain release factor 2 [Veillonella sp. ACP1]
Length = 330
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 49/77 (63%), Gaps = 1/77 (1%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
ID KD+Q R SG GGQ + KT++ V +TH PTGIV++C RS +NR+ A LL A
Sbjct: 194 IDMKDVQVDTYRASGAGGQHINKTDSAVRMTHKPTGIVVQCQSQRSQMQNREQALRLLRA 253
Query: 113 Q-WDVQVNGEDSLNAQI 128
+ +++++ + L QI
Sbjct: 254 KLFELELEKQAELKEQI 270
>gi|256372525|ref|YP_003110349.1| peptide chain release factor 2 [Acidimicrobium ferrooxidans DSM
10331]
gi|256009109|gb|ACU54676.1| peptide chain release factor 2 [Acidimicrobium ferrooxidans DSM
10331]
Length = 369
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 56/98 (57%), Gaps = 20/98 (20%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
IDEKD++ R SG GGQ V T++ V +TH+PTGIV+ C RS +NR A ++LV+
Sbjct: 231 IDEKDLRIDTYRSSGAGGQHVNVTDSAVRITHLPTGIVVSCQNERSQLQNRAKAMQILVS 290
Query: 113 QWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKLDALK 150
+++++RR E+++ +LDAL
Sbjct: 291 -----------------KLEQRRR---EEQRAQLDALS 308
>gi|418746900|ref|ZP_13303213.1| peptide chain release factor 2 [Leptospira santarosai str. CBC379]
gi|410792132|gb|EKR90074.1| peptide chain release factor 2 [Leptospira santarosai str. CBC379]
gi|456873403|gb|EMF88778.1| peptide chain release factor 2 [Leptospira santarosai str. ST188]
Length = 367
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 41/61 (67%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
KI+EKDI+ R SG GGQ V T++ V +TH+P+GIV+ C RS +NR TA ++L
Sbjct: 235 KIEEKDIRVDVYRSSGAGGQHVNTTDSAVRITHLPSGIVVACQNERSQIKNRDTAFKMLK 294
Query: 112 A 112
A
Sbjct: 295 A 295
>gi|410450201|ref|ZP_11304243.1| peptide chain release factor 2 [Leptospira sp. Fiocruz LV3954]
gi|410015960|gb|EKO78050.1| peptide chain release factor 2 [Leptospira sp. Fiocruz LV3954]
Length = 367
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 41/61 (67%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
KI+EKDI+ R SG GGQ V T++ V +TH+P+GIV+ C RS +NR TA ++L
Sbjct: 235 KIEEKDIRVDVYRSSGAGGQHVNTTDSAVRITHLPSGIVVACQNERSQIKNRDTAFKMLK 294
Query: 112 A 112
A
Sbjct: 295 A 295
>gi|408678448|ref|YP_006878275.1| Peptide chain release factor 2 [Streptomyces venezuelae ATCC 10712]
gi|328882777|emb|CCA56016.1| Peptide chain release factor 2 [Streptomyces venezuelae ATCC 10712]
Length = 367
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 49/86 (56%), Gaps = 5/86 (5%)
Query: 33 NDGYHRNLVSNIDIYSTIP-----KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 87
N G + + ++I + +IDE +++ R SGPGGQ V T++ V +TH+PT
Sbjct: 208 NQGRRQTSFAGVEILPVVESSDHVEIDESELRVDVYRASGPGGQGVNTTDSAVRITHLPT 267
Query: 88 GIVIKCHQSRSLSENRKTARELLVAQ 113
GIV+ C RS +N+ +A +L A+
Sbjct: 268 GIVVSCQNERSQIQNKASAMNVLQAK 293
>gi|306820781|ref|ZP_07454406.1| peptide chain release factor RF2 [Eubacterium yurii subsp.
margaretiae ATCC 43715]
gi|304551171|gb|EFM39137.1| peptide chain release factor RF2 [Eubacterium yurii subsp.
margaretiae ATCC 43715]
Length = 316
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 42/62 (67%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
+I+ KD++ R SG GGQ V KT + + +THIPTG+V++C RS NR+TA ++L
Sbjct: 182 EINPKDLKVDTYRSSGAGGQHVNKTESAIRITHIPTGVVVQCQNERSQISNRETAMKMLT 241
Query: 112 AQ 113
A+
Sbjct: 242 AK 243
>gi|386325949|ref|YP_006022066.1| Peptide chain release factor 1 [Shewanella baltica BA175]
gi|333820094|gb|AEG12760.1| Peptide chain release factor 1 [Shewanella baltica BA175]
Length = 363
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 54/97 (55%), Gaps = 15/97 (15%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
I+ D++ R SG GGQ V KT++ + +THIPTGIV++C RS +NR A +L
Sbjct: 219 INPADLKVDTFRSSGAGGQHVNKTDSAIRITHIPTGIVVECQDQRSQHKNRAQAMSVLA- 277
Query: 113 QWDVQVNGEDSLNAQIRRI-DEKRRATQEQKKRKLDA 148
A+I+ + DEKRR+ +E +R L A
Sbjct: 278 -------------ARIQALEDEKRRSAEESTRRSLVA 301
>gi|417778830|ref|ZP_12426630.1| peptide chain release factor 2 [Leptospira weilii str. 2006001853]
gi|410781090|gb|EKR65669.1| peptide chain release factor 2 [Leptospira weilii str. 2006001853]
Length = 367
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 41/61 (67%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
KI+EKDI+ R SG GGQ V T++ V +TH+P+GIV+ C RS +NR TA ++L
Sbjct: 235 KIEEKDIRVDVYRSSGAGGQHVNTTDSAVRITHLPSGIVVACQNERSQIKNRDTAFKMLK 294
Query: 112 A 112
A
Sbjct: 295 A 295
>gi|418754703|ref|ZP_13310925.1| peptide chain release factor 2 [Leptospira santarosai str. MOR084]
gi|421112342|ref|ZP_15572800.1| peptide chain release factor 2 [Leptospira santarosai str. JET]
gi|422005320|ref|ZP_16352509.1| peptide chain release factor 2 [Leptospira santarosai serovar
Shermani str. LT 821]
gi|409964804|gb|EKO32679.1| peptide chain release factor 2 [Leptospira santarosai str. MOR084]
gi|410802397|gb|EKS08557.1| peptide chain release factor 2 [Leptospira santarosai str. JET]
gi|417255985|gb|EKT85431.1| peptide chain release factor 2 [Leptospira santarosai serovar
Shermani str. LT 821]
Length = 367
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 41/61 (67%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
KI+EKDI+ R SG GGQ V T++ V +TH+P+GIV+ C RS +NR TA ++L
Sbjct: 235 KIEEKDIRVDVYRSSGAGGQHVNTTDSAVRITHLPSGIVVACQNERSQIKNRDTAFKMLK 294
Query: 112 A 112
A
Sbjct: 295 A 295
>gi|429759674|ref|ZP_19292170.1| peptide chain release factor 2 [Veillonella atypica KON]
gi|429179264|gb|EKY20520.1| peptide chain release factor 2 [Veillonella atypica KON]
Length = 330
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 49/77 (63%), Gaps = 1/77 (1%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
ID KD+Q R SG GGQ + KT++ V +TH PTGIV++C RS +NR+ A LL A
Sbjct: 194 IDMKDVQVDTYRASGAGGQHINKTDSAVRMTHKPTGIVVQCQSQRSQMQNREQALRLLRA 253
Query: 113 Q-WDVQVNGEDSLNAQI 128
+ +++++ + L QI
Sbjct: 254 KLFELELEKQAELKEQI 270
>gi|334132944|ref|ZP_08506699.1| Peptide chain release factor 1 [Methyloversatilis universalis FAM5]
gi|333441854|gb|EGK69826.1| Peptide chain release factor 1 [Methyloversatilis universalis FAM5]
Length = 361
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
I+ D++ R SG GGQ + KT++ V +THIPTGIV++C RS N+ A +L A
Sbjct: 217 INPADLRIDTFRASGAGGQHINKTDSAVRITHIPTGIVVECQDDRSQHRNKAQAMSVLAA 276
Query: 113 QW-DVQVNGEDSLNAQIRR 130
+ D QV DS A RR
Sbjct: 277 RIRDAQVRARDSQIASTRR 295
>gi|116329128|ref|YP_798848.1| peptide chain release factor 2 [Leptospira borgpetersenii serovar
Hardjo-bovis str. L550]
gi|116330263|ref|YP_799981.1| peptide chain release factor 2 [Leptospira borgpetersenii serovar
Hardjo-bovis str. JB197]
gi|122281974|sp|Q04V47.1|RF2_LEPBJ RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|122283090|sp|Q04YD0.1|RF2_LEPBL RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|116121872|gb|ABJ79915.1| Peptide chain release factor 2 [Leptospira borgpetersenii serovar
Hardjo-bovis str. L550]
gi|116123952|gb|ABJ75223.1| Peptide chain release factor 2 [Leptospira borgpetersenii serovar
Hardjo-bovis str. JB197]
Length = 367
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 41/61 (67%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
KI+EKDI+ R SG GGQ V T++ V +TH+P+GIV+ C RS +NR TA ++L
Sbjct: 235 KIEEKDIRVDVYRSSGAGGQHVNTTDSAVRITHLPSGIVVACQNERSQIKNRDTAFKMLK 294
Query: 112 A 112
A
Sbjct: 295 A 295
>gi|169628533|ref|YP_001702182.1| peptide chain release factor 1 [Mycobacterium abscessus ATCC 19977]
gi|365869421|ref|ZP_09408968.1| peptide chain release factor 1 [Mycobacterium massiliense CCUG
48898 = JCM 15300]
gi|397679001|ref|YP_006520536.1| peptide chain release factor 1 [Mycobacterium massiliense str. GO
06]
gi|414582681|ref|ZP_11439821.1| peptide chain release factor 1 [Mycobacterium abscessus 5S-1215]
gi|418249122|ref|ZP_12875444.1| peptide chain release factor 1 [Mycobacterium abscessus 47J26]
gi|419711628|ref|ZP_14239091.1| peptide chain release factor 1 [Mycobacterium abscessus M93]
gi|420863399|ref|ZP_15326792.1| peptide chain release factor 1 [Mycobacterium abscessus 4S-0303]
gi|420867795|ref|ZP_15331180.1| peptide chain release factor 1 [Mycobacterium abscessus 4S-0726-RA]
gi|420872228|ref|ZP_15335608.1| peptide chain release factor 1 [Mycobacterium abscessus 4S-0726-RB]
gi|420876605|ref|ZP_15339977.1| peptide chain release factor 1 [Mycobacterium abscessus 5S-0304]
gi|420882686|ref|ZP_15346050.1| peptide chain release factor 1 [Mycobacterium abscessus 5S-0421]
gi|420888337|ref|ZP_15351691.1| peptide chain release factor 1 [Mycobacterium abscessus 5S-0422]
gi|420893220|ref|ZP_15356562.1| peptide chain release factor 1 [Mycobacterium abscessus 5S-0708]
gi|420898605|ref|ZP_15361941.1| peptide chain release factor 1 [Mycobacterium abscessus 5S-0817]
gi|420903887|ref|ZP_15367208.1| peptide chain release factor 1 [Mycobacterium abscessus 5S-1212]
gi|420909011|ref|ZP_15372324.1| peptide chain release factor 1 [Mycobacterium abscessus 6G-0125-R]
gi|420915393|ref|ZP_15378698.1| peptide chain release factor 1 [Mycobacterium abscessus 6G-0125-S]
gi|420919783|ref|ZP_15383081.1| peptide chain release factor 1 [Mycobacterium abscessus 6G-0728-S]
gi|420926281|ref|ZP_15389566.1| peptide chain release factor 1 [Mycobacterium abscessus 6G-1108]
gi|420930586|ref|ZP_15393862.1| peptide chain release factor 1 [Mycobacterium massiliense
1S-151-0930]
gi|420938931|ref|ZP_15402200.1| peptide chain release factor 1 [Mycobacterium massiliense
1S-152-0914]
gi|420940838|ref|ZP_15404100.1| peptide chain release factor 1 [Mycobacterium massiliense
1S-153-0915]
gi|420945879|ref|ZP_15409132.1| peptide chain release factor 1 [Mycobacterium massiliense
1S-154-0310]
gi|420951100|ref|ZP_15414346.1| peptide chain release factor 1 [Mycobacterium massiliense 2B-0626]
gi|420955271|ref|ZP_15418510.1| peptide chain release factor 1 [Mycobacterium massiliense 2B-0107]
gi|420960789|ref|ZP_15424017.1| peptide chain release factor 1 [Mycobacterium massiliense 2B-1231]
gi|420965749|ref|ZP_15428963.1| peptide chain release factor 1 [Mycobacterium abscessus 3A-0810-R]
gi|420970844|ref|ZP_15434041.1| peptide chain release factor 1 [Mycobacterium abscessus 5S-0921]
gi|420976627|ref|ZP_15439809.1| peptide chain release factor 1 [Mycobacterium abscessus 6G-0212]
gi|420982007|ref|ZP_15445177.1| peptide chain release factor 1 [Mycobacterium abscessus 6G-0728-R]
gi|420986383|ref|ZP_15449544.1| peptide chain release factor 1 [Mycobacterium abscessus 4S-0206]
gi|420991239|ref|ZP_15454391.1| peptide chain release factor 1 [Mycobacterium massiliense 2B-0307]
gi|420997075|ref|ZP_15460215.1| peptide chain release factor 1 [Mycobacterium massiliense
2B-0912-R]
gi|421001509|ref|ZP_15464639.1| peptide chain release factor 1 [Mycobacterium massiliense
2B-0912-S]
gi|421006595|ref|ZP_15469710.1| peptide chain release factor 1 [Mycobacterium abscessus 3A-0119-R]
gi|421011875|ref|ZP_15474968.1| peptide chain release factor 1 [Mycobacterium abscessus 3A-0122-R]
gi|421016793|ref|ZP_15479860.1| peptide chain release factor 1 [Mycobacterium abscessus 3A-0122-S]
gi|421022538|ref|ZP_15485586.1| peptide chain release factor 1 [Mycobacterium abscessus 3A-0731]
gi|421028034|ref|ZP_15491071.1| peptide chain release factor 1 [Mycobacterium abscessus 3A-0930-R]
gi|421033742|ref|ZP_15496764.1| peptide chain release factor 1 [Mycobacterium abscessus 3A-0930-S]
gi|421039143|ref|ZP_15502154.1| peptide chain release factor 1 [Mycobacterium abscessus 4S-0116-R]
gi|421042584|ref|ZP_15505589.1| peptide chain release factor 1 [Mycobacterium abscessus 4S-0116-S]
gi|421048281|ref|ZP_15511277.1| peptide chain release factor 1 [Mycobacterium massiliense CCUG
48898 = JCM 15300]
gi|238688924|sp|B1MLV1.1|RF1_MYCA9 RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|169240500|emb|CAM61528.1| Probable peptide chain release factor 1 (RF-1) [Mycobacterium
abscessus]
gi|353450777|gb|EHB99171.1| peptide chain release factor 1 [Mycobacterium abscessus 47J26]
gi|363998878|gb|EHM20084.1| peptide chain release factor 1 [Mycobacterium massiliense CCUG
48898 = JCM 15300]
gi|382938950|gb|EIC63279.1| peptide chain release factor 1 [Mycobacterium abscessus M93]
gi|392073198|gb|EIT99038.1| peptide chain release factor 1 [Mycobacterium abscessus 4S-0726-RA]
gi|392073919|gb|EIT99757.1| peptide chain release factor 1 [Mycobacterium abscessus 4S-0303]
gi|392076417|gb|EIU02250.1| peptide chain release factor 1 [Mycobacterium abscessus 4S-0726-RB]
gi|392090282|gb|EIU16095.1| peptide chain release factor 1 [Mycobacterium abscessus 5S-0304]
gi|392091741|gb|EIU17552.1| peptide chain release factor 1 [Mycobacterium abscessus 5S-0421]
gi|392092897|gb|EIU18702.1| peptide chain release factor 1 [Mycobacterium abscessus 5S-0422]
gi|392101810|gb|EIU27597.1| peptide chain release factor 1 [Mycobacterium abscessus 5S-0708]
gi|392107846|gb|EIU33628.1| peptide chain release factor 1 [Mycobacterium abscessus 5S-0817]
gi|392109145|gb|EIU34923.1| peptide chain release factor 1 [Mycobacterium abscessus 5S-1212]
gi|392117833|gb|EIU43601.1| peptide chain release factor 1 [Mycobacterium abscessus 5S-1215]
gi|392121385|gb|EIU47150.1| peptide chain release factor 1 [Mycobacterium abscessus 6G-0125-R]
gi|392123077|gb|EIU48839.1| peptide chain release factor 1 [Mycobacterium abscessus 6G-0125-S]
gi|392133788|gb|EIU59530.1| peptide chain release factor 1 [Mycobacterium abscessus 6G-0728-S]
gi|392138689|gb|EIU64422.1| peptide chain release factor 1 [Mycobacterium abscessus 6G-1108]
gi|392139604|gb|EIU65336.1| peptide chain release factor 1 [Mycobacterium massiliense
1S-151-0930]
gi|392144446|gb|EIU70171.1| peptide chain release factor 1 [Mycobacterium massiliense
1S-152-0914]
gi|392151625|gb|EIU77333.1| peptide chain release factor 1 [Mycobacterium massiliense
1S-153-0915]
gi|392159087|gb|EIU84783.1| peptide chain release factor 1 [Mycobacterium massiliense
1S-154-0310]
gi|392160877|gb|EIU86568.1| peptide chain release factor 1 [Mycobacterium massiliense 2B-0626]
gi|392170886|gb|EIU96563.1| peptide chain release factor 1 [Mycobacterium abscessus 6G-0212]
gi|392171816|gb|EIU97489.1| peptide chain release factor 1 [Mycobacterium abscessus 5S-0921]
gi|392174025|gb|EIU99691.1| peptide chain release factor 1 [Mycobacterium abscessus 6G-0728-R]
gi|392187800|gb|EIV13439.1| peptide chain release factor 1 [Mycobacterium abscessus 4S-0206]
gi|392189319|gb|EIV14953.1| peptide chain release factor 1 [Mycobacterium massiliense
2B-0912-R]
gi|392190250|gb|EIV15882.1| peptide chain release factor 1 [Mycobacterium massiliense 2B-0307]
gi|392200327|gb|EIV25933.1| peptide chain release factor 1 [Mycobacterium massiliense
2B-0912-S]
gi|392202347|gb|EIV27944.1| peptide chain release factor 1 [Mycobacterium abscessus 3A-0119-R]
gi|392210279|gb|EIV35849.1| peptide chain release factor 1 [Mycobacterium abscessus 3A-0122-R]
gi|392215235|gb|EIV40783.1| peptide chain release factor 1 [Mycobacterium abscessus 3A-0731]
gi|392215893|gb|EIV41440.1| peptide chain release factor 1 [Mycobacterium abscessus 3A-0122-S]
gi|392227357|gb|EIV52871.1| peptide chain release factor 1 [Mycobacterium abscessus 4S-0116-R]
gi|392230283|gb|EIV55793.1| peptide chain release factor 1 [Mycobacterium abscessus 3A-0930-S]
gi|392231940|gb|EIV57444.1| peptide chain release factor 1 [Mycobacterium abscessus 3A-0930-R]
gi|392241650|gb|EIV67138.1| peptide chain release factor 1 [Mycobacterium abscessus 4S-0116-S]
gi|392242446|gb|EIV67933.1| peptide chain release factor 1 [Mycobacterium massiliense CCUG
48898]
gi|392253854|gb|EIV79321.1| peptide chain release factor 1 [Mycobacterium massiliense 2B-1231]
gi|392255799|gb|EIV81260.1| peptide chain release factor 1 [Mycobacterium massiliense 2B-0107]
gi|392257737|gb|EIV83186.1| peptide chain release factor 1 [Mycobacterium abscessus 3A-0810-R]
gi|395457266|gb|AFN62929.1| Peptide chain release factor 1 [Mycobacterium massiliense str. GO
06]
Length = 356
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 50/91 (54%), Gaps = 6/91 (6%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELL- 110
+IDE D++ R SG GGQ V T++ V +TH+PTGIV+ C RS +N+ A ++L
Sbjct: 216 QIDESDLRIDVYRSSGKGGQGVNTTDSAVRITHLPTGIVVTCQNERSQLQNKARAMQVLA 275
Query: 111 -----VAQWDVQVNGEDSLNAQIRRIDEKRR 136
+A+ Q + +QIR +D R
Sbjct: 276 ARLQALAEEQAQADASAGRASQIRTVDRSER 306
>gi|402310432|ref|ZP_10829398.1| peptide chain release factor 2 [Eubacterium sp. AS15]
gi|400368884|gb|EJP21891.1| peptide chain release factor 2 [Eubacterium sp. AS15]
Length = 316
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 42/62 (67%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
+I+ KD++ R SG GGQ V KT + + +THIPTG+V++C RS NR+TA ++L
Sbjct: 182 EINPKDLKVDTYRSSGAGGQHVNKTESAIRITHIPTGVVVQCQNERSQISNRETAMKMLT 241
Query: 112 AQ 113
A+
Sbjct: 242 AK 243
>gi|418419676|ref|ZP_12992859.1| peptide chain release factor 1 [Mycobacterium abscessus subsp.
bolletii BD]
gi|364001306|gb|EHM22502.1| peptide chain release factor 1 [Mycobacterium abscessus subsp.
bolletii BD]
Length = 356
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 50/91 (54%), Gaps = 6/91 (6%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELL- 110
+IDE D++ R SG GGQ V T++ V +TH+PTGIV+ C RS +N+ A ++L
Sbjct: 216 QIDESDLRIDVYRSSGKGGQGVNTTDSAVRITHLPTGIVVTCQNERSQLQNKARAMQVLA 275
Query: 111 -----VAQWDVQVNGEDSLNAQIRRIDEKRR 136
+A+ Q + +QIR +D R
Sbjct: 276 ARLQALAEEQAQADASAGRASQIRTVDRSER 306
>gi|284046044|ref|YP_003396384.1| peptide chain release factor 2 [Conexibacter woesei DSM 14684]
gi|283950265|gb|ADB53009.1| peptide chain release factor 2 [Conexibacter woesei DSM 14684]
Length = 372
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/59 (49%), Positives = 39/59 (66%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELL 110
+ID+ D+Q R SG GGQ V KT++ V +TH P+GIV++C RS S NR TA +L
Sbjct: 237 EIDDDDLQVDTYRASGAGGQHVNKTDSAVRITHRPSGIVVQCQNERSQSSNRATAMAML 295
>gi|149196339|ref|ZP_01873394.1| peptide chain release factor RF-2 [Lentisphaera araneosa HTCC2155]
gi|149140600|gb|EDM28998.1| peptide chain release factor RF-2 [Lentisphaera araneosa HTCC2155]
Length = 332
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 40/61 (65%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
ID KD++ R SG GGQ V T++ + LTH+PTGIV+ C RS +NR TA ++L A
Sbjct: 195 IDAKDLRVDTFRASGAGGQHVNTTDSAIRLTHLPTGIVVSCQMERSQHKNRATAMKMLGA 254
Query: 113 Q 113
+
Sbjct: 255 K 255
>gi|354594597|ref|ZP_09012636.1| peptide chain release factor 2 [Commensalibacter intestini A911]
gi|353672273|gb|EHD13973.1| peptide chain release factor 2 [Commensalibacter intestini A911]
Length = 348
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 38/60 (63%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
I+E D++ R SG GGQ + KT + + +TH+PTGIV+ C RS NR TA E+L A
Sbjct: 204 INESDLKVDTYRASGAGGQHINKTESAIRITHVPTGIVVACQNDRSQHRNRATAMEMLKA 263
>gi|86739504|ref|YP_479904.1| peptide chain release factor 2 [Frankia sp. CcI3]
gi|123751448|sp|Q2JEW7.1|RF2_FRASC RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|86566366|gb|ABD10175.1| bacterial peptide chain release factor 2 (bRF-2) [Frankia sp. CcI3]
Length = 366
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 40/61 (65%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
ID+KD++ R SGPGGQ V T++ V +TH+PTGIV+ C RS +N+ A +L A
Sbjct: 228 IDDKDLRIDIFRSSGPGGQGVNTTDSAVRITHLPTGIVVTCQNERSQLQNKAAAMIVLQA 287
Query: 113 Q 113
+
Sbjct: 288 K 288
>gi|350569131|ref|ZP_08937528.1| peptide chain release factor RF2 [Propionibacterium avidum ATCC
25577]
gi|348660709|gb|EGY77416.1| peptide chain release factor RF2 [Propionibacterium avidum ATCC
25577]
Length = 368
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 47/86 (54%), Gaps = 5/86 (5%)
Query: 33 NDGYHRNLVSNIDIYSTIPKIDEKDIQERFVR-----GSGPGGQAVAKTNNCVVLTHIPT 87
N G + + +++ + + D DI E +R SGPGGQ V T++ V LTH+PT
Sbjct: 208 NQGRRQTSFAGVEVLPVVEETDHVDIPESDLRVDVFHASGPGGQGVNTTDSAVRLTHLPT 267
Query: 88 GIVIKCHQSRSLSENRKTARELLVAQ 113
GIV+ C RS +N+ A +L A+
Sbjct: 268 GIVVSCQNERSQIQNKAAALRVLQAK 293
>gi|332295519|ref|YP_004437442.1| peptide chain release factor 1 [Thermodesulfobium narugense DSM
14796]
gi|332178622|gb|AEE14311.1| Peptide chain release factor 1 [Thermodesulfobium narugense DSM
14796]
Length = 361
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 40/61 (65%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
IDEKD++ R G GGQ V KT++ V +TH+PTGIV+ C RS +N++ A +L A
Sbjct: 219 IDEKDLKIDTFRAGGAGGQHVNKTDSAVRITHLPTGIVVACQDERSQFQNKEKAMRILAA 278
Query: 113 Q 113
+
Sbjct: 279 K 279
>gi|407774539|ref|ZP_11121837.1| peptide chain release factor 2 [Thalassospira profundimaris WP0211]
gi|407282581|gb|EKF08139.1| peptide chain release factor 2 [Thalassospira profundimaris WP0211]
Length = 321
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/120 (35%), Positives = 65/120 (54%), Gaps = 12/120 (10%)
Query: 3 IKIVMWPMRDRNLAGIRLLESQVTITRELRNDGYHRNL-----VSNIDIYSTIP-----K 52
IK V + + N G L+++V + R +R Y + S++ +Y I +
Sbjct: 120 IKSVTYKITGHNAYG--WLKNEVGVHRLVRISPYDSSARRHTSFSSVWVYPVIDDDIEIE 177
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
I +KD++ R SG GGQ V +T++ V +THIPTGIV +C RS +NR TA ++L A
Sbjct: 178 ILDKDLRVDTYRASGAGGQHVNRTDSAVRITHIPTGIVAQCQNDRSQHKNRDTAMKMLKA 237
>gi|254386617|ref|ZP_05001914.1| peptide chain release factor 2 [Streptomyces sp. Mg1]
gi|194345459|gb|EDX26425.1| peptide chain release factor 2 [Streptomyces sp. Mg1]
Length = 369
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 56/99 (56%), Gaps = 20/99 (20%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
+IDE +++ R SGPGGQ V T++ V +TH+PTGIV+ C RS +N+ +A +L
Sbjct: 232 EIDEGELRIDVYRASGPGGQGVNTTDSAVRITHLPTGIVVSCQNERSQIQNKASAMNVLQ 291
Query: 112 AQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKLDALK 150
A ++ E+RR ++++ K+DALK
Sbjct: 292 A-----------------KLLERRR---QEEQAKMDALK 310
>gi|183219678|ref|YP_001837674.1| peptide chain release factor 2 [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Paris)']
gi|189909814|ref|YP_001961369.1| peptide chain release factor 2 [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Ames)']
gi|167774490|gb|ABZ92791.1| Peptide chain release factor 2 [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Ames)']
gi|167778100|gb|ABZ96398.1| Peptide chain release factor 2 [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Paris)']
Length = 375
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 40/60 (66%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
I+EKD++ R SG GGQ V T++ V +THIPTG+V+ C RS +NR TA ++L A
Sbjct: 235 IEEKDLRVDVYRSSGAGGQHVNTTDSAVRITHIPTGVVVSCQMERSQIKNRDTAMKMLKA 294
>gi|422555869|ref|ZP_16631631.1| peptide chain release factor 2 [Propionibacterium acnes HL005PA2]
gi|314986213|gb|EFT30305.1| peptide chain release factor 2 [Propionibacterium acnes HL005PA2]
Length = 371
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 47/86 (54%), Gaps = 5/86 (5%)
Query: 33 NDGYHRNLVSNIDIYSTIPKIDEKDIQERFVR-----GSGPGGQAVAKTNNCVVLTHIPT 87
N G + + +++ + + D DI E +R SGPGGQ V T++ V LTH+PT
Sbjct: 211 NQGRRQTSFAGVEVLPVVEETDHVDIPESDLRVDVFHASGPGGQGVNTTDSAVRLTHLPT 270
Query: 88 GIVIKCHQSRSLSENRKTARELLVAQ 113
GIV+ C RS +N+ A +L A+
Sbjct: 271 GIVVSCQNERSQIQNKAAALRVLQAK 296
>gi|422427717|ref|ZP_16504628.1| peptide chain release factor 2 [Propionibacterium acnes HL087PA1]
gi|422433544|ref|ZP_16510412.1| peptide chain release factor 2 [Propionibacterium acnes HL059PA2]
gi|422436114|ref|ZP_16512971.1| peptide chain release factor 2 [Propionibacterium acnes HL083PA2]
gi|422444424|ref|ZP_16521218.1| peptide chain release factor 2 [Propionibacterium acnes HL002PA1]
gi|422445123|ref|ZP_16521877.1| peptide chain release factor 2 [Propionibacterium acnes HL027PA1]
gi|422450881|ref|ZP_16527594.1| peptide chain release factor 2 [Propionibacterium acnes HL030PA2]
gi|422453755|ref|ZP_16530442.1| peptide chain release factor 2 [Propionibacterium acnes HL087PA3]
gi|422501687|ref|ZP_16577941.1| peptide chain release factor 2 [Propionibacterium acnes HL063PA2]
gi|422510282|ref|ZP_16586428.1| peptide chain release factor 2 [Propionibacterium acnes HL059PA1]
gi|422543255|ref|ZP_16619105.1| peptide chain release factor 2 [Propionibacterium acnes HL037PA1]
gi|422548178|ref|ZP_16623994.1| peptide chain release factor 2 [Propionibacterium acnes HL050PA3]
gi|422550066|ref|ZP_16625866.1| peptide chain release factor 2 [Propionibacterium acnes HL050PA1]
gi|422562692|ref|ZP_16638369.1| peptide chain release factor 2 [Propionibacterium acnes HL046PA1]
gi|422571720|ref|ZP_16647301.1| peptide chain release factor 2 [Propionibacterium acnes HL067PA1]
gi|313816439|gb|EFS54153.1| peptide chain release factor 2 [Propionibacterium acnes HL059PA1]
gi|313827262|gb|EFS64976.1| peptide chain release factor 2 [Propionibacterium acnes HL063PA2]
gi|314917824|gb|EFS81655.1| peptide chain release factor 2 [Propionibacterium acnes HL050PA1]
gi|314919714|gb|EFS83545.1| peptide chain release factor 2 [Propionibacterium acnes HL050PA3]
gi|314930043|gb|EFS93874.1| peptide chain release factor 2 [Propionibacterium acnes HL067PA1]
gi|314956378|gb|EFT00690.1| peptide chain release factor 2 [Propionibacterium acnes HL027PA1]
gi|314957250|gb|EFT01353.1| peptide chain release factor 2 [Propionibacterium acnes HL002PA1]
gi|314967699|gb|EFT11798.1| peptide chain release factor 2 [Propionibacterium acnes HL037PA1]
gi|315098170|gb|EFT70146.1| peptide chain release factor 2 [Propionibacterium acnes HL059PA2]
gi|315101677|gb|EFT73653.1| peptide chain release factor 2 [Propionibacterium acnes HL046PA1]
gi|315109496|gb|EFT81472.1| peptide chain release factor 2 [Propionibacterium acnes HL030PA2]
gi|327452380|gb|EGE99034.1| peptide chain release factor 2 [Propionibacterium acnes HL087PA3]
gi|327452743|gb|EGE99397.1| peptide chain release factor 2 [Propionibacterium acnes HL083PA2]
gi|328753837|gb|EGF67453.1| peptide chain release factor 2 [Propionibacterium acnes HL087PA1]
Length = 370
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 47/86 (54%), Gaps = 5/86 (5%)
Query: 33 NDGYHRNLVSNIDIYSTIPKIDEKDIQERFVR-----GSGPGGQAVAKTNNCVVLTHIPT 87
N G + + +++ + + D DI E +R SGPGGQ V T++ V LTH+PT
Sbjct: 210 NQGRRQTSFAGVEVLPVVEETDHVDIPESDLRVDVFHASGPGGQGVNTTDSAVRLTHLPT 269
Query: 88 GIVIKCHQSRSLSENRKTARELLVAQ 113
GIV+ C RS +N+ A +L A+
Sbjct: 270 GIVVSCQNERSQIQNKAAALRVLQAK 295
>gi|422539085|ref|ZP_16614958.1| peptide chain release factor 2 [Propionibacterium acnes HL013PA1]
gi|422579243|ref|ZP_16654766.1| peptide chain release factor 2 [Propionibacterium acnes HL005PA4]
gi|313764090|gb|EFS35454.1| peptide chain release factor 2 [Propionibacterium acnes HL013PA1]
gi|314914951|gb|EFS78782.1| peptide chain release factor 2 [Propionibacterium acnes HL005PA4]
Length = 370
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 47/86 (54%), Gaps = 5/86 (5%)
Query: 33 NDGYHRNLVSNIDIYSTIPKIDEKDIQERFVR-----GSGPGGQAVAKTNNCVVLTHIPT 87
N G + + +++ + + D DI E +R SGPGGQ V T++ V LTH+PT
Sbjct: 210 NQGRRQTSFAGVEVLPVVEETDHVDIPESDLRVDVFHASGPGGQGVNTTDSAVRLTHLPT 269
Query: 88 GIVIKCHQSRSLSENRKTARELLVAQ 113
GIV+ C RS +N+ A +L A+
Sbjct: 270 GIVVSCQNERSQIQNKAAALRVLQAK 295
>gi|284989796|ref|YP_003408350.1| peptide chain release factor 2 [Geodermatophilus obscurus DSM
43160]
gi|284063041|gb|ADB73979.1| peptide chain release factor 2 [Geodermatophilus obscurus DSM
43160]
Length = 370
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 46/85 (54%), Gaps = 5/85 (5%)
Query: 33 NDGYHRNLVSNIDIYSTIPKIDEKDIQER-----FVRGSGPGGQAVAKTNNCVVLTHIPT 87
N G + + +++ + + D DI E R SGPGGQ+V T++ V +TH+PT
Sbjct: 207 NQGRRQTSFAGVEVLPVVEQTDHVDIPENEIRIDVFRSSGPGGQSVNTTDSAVRITHLPT 266
Query: 88 GIVIKCHQSRSLSENRKTARELLVA 112
GIV+ C +S +NR A +L A
Sbjct: 267 GIVVSCQNEKSQIQNRAAAMRVLQA 291
>gi|337290240|ref|YP_004629261.1| peptide chain release factor RF-2 [Corynebacterium ulcerans
BR-AD22]
gi|397653481|ref|YP_006494164.1| peptide chain release factor 2 [Corynebacterium ulcerans 0102]
gi|334698546|gb|AEG83342.1| peptide chain release factor RF-2 [Corynebacterium ulcerans
BR-AD22]
gi|393402437|dbj|BAM26929.1| peptide chain release factor 2 [Corynebacterium ulcerans 0102]
Length = 367
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 49/86 (56%), Gaps = 5/86 (5%)
Query: 33 NDGYHRNLVSNIDIYSTIPKIDEKDIQERFVR-----GSGPGGQAVAKTNNCVVLTHIPT 87
N G + + +++ + + D DI + VR SGPGGQ+V T++ V LTHIPT
Sbjct: 205 NQGRRQTSFAEVEVLPVVEQTDHIDIPDSEVRVDVYRSSGPGGQSVNTTDSAVRLTHIPT 264
Query: 88 GIVIKCHQSRSLSENRKTARELLVAQ 113
GIV+ C +S +N+ +A +L A+
Sbjct: 265 GIVVTCQNEKSQIQNKASAMRVLQAK 290
>gi|384515159|ref|YP_005710251.1| peptide chain release factor RF-2 [Corynebacterium ulcerans 809]
gi|334696360|gb|AEG81157.1| peptide chain release factor RF-2 [Corynebacterium ulcerans 809]
Length = 367
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 49/86 (56%), Gaps = 5/86 (5%)
Query: 33 NDGYHRNLVSNIDIYSTIPKIDEKDIQERFVR-----GSGPGGQAVAKTNNCVVLTHIPT 87
N G + + +++ + + D DI + VR SGPGGQ+V T++ V LTHIPT
Sbjct: 205 NQGRRQTSFAEVEVLPVVEQTDHIDIPDSEVRVDVYRSSGPGGQSVNTTDSAVRLTHIPT 264
Query: 88 GIVIKCHQSRSLSENRKTARELLVAQ 113
GIV+ C +S +N+ +A +L A+
Sbjct: 265 GIVVTCQNEKSQIQNKASAMRVLQAK 290
>gi|334563502|ref|ZP_08516493.1| peptide chain release factor 2 [Corynebacterium bovis DSM 20582]
Length = 373
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 48/87 (55%), Gaps = 5/87 (5%)
Query: 31 LRNDGYHRNLVSNIDIYSTIPKIDEKDIQERFVR-----GSGPGGQAVAKTNNCVVLTHI 85
N G + + +++ + + D DI E VR SGPGGQ+V T++ V LTH+
Sbjct: 208 FDNQGRRQTSFAEVEVLPVVEQTDHIDIDENEVRVDVYRSSGPGGQSVNTTDSAVRLTHV 267
Query: 86 PTGIVIKCHQSRSLSENRKTARELLVA 112
PTGIV+ C +S +N+ +A +L A
Sbjct: 268 PTGIVVTCQNEKSQIQNKASAMRVLQA 294
>gi|289425462|ref|ZP_06427239.1| peptide chain release factor 2 [Propionibacterium acnes SK187]
gi|422385819|ref|ZP_16465944.1| peptide chain release factor 2 [Propionibacterium acnes HL096PA3]
gi|422387631|ref|ZP_16467743.1| peptide chain release factor 2 [Propionibacterium acnes HL096PA2]
gi|422392361|ref|ZP_16472431.1| peptide chain release factor 2 [Propionibacterium acnes HL099PA1]
gi|422426188|ref|ZP_16503112.1| peptide chain release factor 2 [Propionibacterium acnes HL043PA1]
gi|422431380|ref|ZP_16508258.1| peptide chain release factor 2 [Propionibacterium acnes HL072PA2]
gi|422449438|ref|ZP_16526163.1| peptide chain release factor 2 [Propionibacterium acnes HL036PA3]
gi|422457000|ref|ZP_16533662.1| peptide chain release factor 2 [Propionibacterium acnes HL030PA1]
gi|422462215|ref|ZP_16538839.1| peptide chain release factor 2 [Propionibacterium acnes HL038PA1]
gi|422475512|ref|ZP_16551959.1| peptide chain release factor 2 [Propionibacterium acnes HL056PA1]
gi|422478600|ref|ZP_16555019.1| peptide chain release factor 2 [Propionibacterium acnes HL007PA1]
gi|422480977|ref|ZP_16557380.1| peptide chain release factor 2 [Propionibacterium acnes HL063PA1]
gi|422483483|ref|ZP_16559872.1| peptide chain release factor 2 [Propionibacterium acnes HL036PA1]
gi|422486233|ref|ZP_16562589.1| peptide chain release factor 2 [Propionibacterium acnes HL043PA2]
gi|422488286|ref|ZP_16564615.1| peptide chain release factor 2 [Propionibacterium acnes HL013PA2]
gi|422490387|ref|ZP_16566702.1| peptide chain release factor 2 [Propionibacterium acnes HL020PA1]
gi|422495434|ref|ZP_16571721.1| peptide chain release factor 2 [Propionibacterium acnes HL025PA1]
gi|422498157|ref|ZP_16574429.1| peptide chain release factor 2 [Propionibacterium acnes HL002PA3]
gi|422501961|ref|ZP_16578206.1| peptide chain release factor 2 [Propionibacterium acnes HL027PA2]
gi|422505918|ref|ZP_16582141.1| peptide chain release factor 2 [Propionibacterium acnes HL036PA2]
gi|422507292|ref|ZP_16583496.1| peptide chain release factor 2 [Propionibacterium acnes HL046PA2]
gi|422513734|ref|ZP_16589857.1| peptide chain release factor 2 [Propionibacterium acnes HL087PA2]
gi|422518949|ref|ZP_16595017.1| peptide chain release factor 2 [Propionibacterium acnes HL074PA1]
gi|422522207|ref|ZP_16598237.1| peptide chain release factor 2 [Propionibacterium acnes HL045PA1]
gi|422527592|ref|ZP_16603582.1| peptide chain release factor 2 [Propionibacterium acnes HL083PA1]
gi|422530188|ref|ZP_16606152.1| peptide chain release factor 2 [Propionibacterium acnes HL053PA1]
gi|422534695|ref|ZP_16610619.1| peptide chain release factor 2 [Propionibacterium acnes HL072PA1]
gi|422537031|ref|ZP_16612919.1| peptide chain release factor 2 [Propionibacterium acnes HL078PA1]
gi|422551888|ref|ZP_16627679.1| peptide chain release factor 2 [Propionibacterium acnes HL005PA3]
gi|422560639|ref|ZP_16636326.1| peptide chain release factor 2 [Propionibacterium acnes HL005PA1]
gi|422568300|ref|ZP_16643918.1| peptide chain release factor 2 [Propionibacterium acnes HL002PA2]
gi|289154440|gb|EFD03128.1| peptide chain release factor 2 [Propionibacterium acnes SK187]
gi|313771879|gb|EFS37845.1| peptide chain release factor 2 [Propionibacterium acnes HL074PA1]
gi|313807112|gb|EFS45607.1| peptide chain release factor 2 [Propionibacterium acnes HL087PA2]
gi|313809604|gb|EFS47340.1| peptide chain release factor 2 [Propionibacterium acnes HL083PA1]
gi|313813321|gb|EFS51035.1| peptide chain release factor 2 [Propionibacterium acnes HL025PA1]
gi|313819308|gb|EFS57022.1| peptide chain release factor 2 [Propionibacterium acnes HL046PA2]
gi|313819957|gb|EFS57671.1| peptide chain release factor 2 [Propionibacterium acnes HL036PA1]
gi|313823250|gb|EFS60964.1| peptide chain release factor 2 [Propionibacterium acnes HL036PA2]
gi|313824962|gb|EFS62676.1| peptide chain release factor 2 [Propionibacterium acnes HL063PA1]
gi|313829923|gb|EFS67637.1| peptide chain release factor 2 [Propionibacterium acnes HL007PA1]
gi|313833072|gb|EFS70786.1| peptide chain release factor 2 [Propionibacterium acnes HL056PA1]
gi|314924796|gb|EFS88627.1| peptide chain release factor 2 [Propionibacterium acnes HL036PA3]
gi|314960646|gb|EFT04748.1| peptide chain release factor 2 [Propionibacterium acnes HL002PA2]
gi|314972908|gb|EFT17005.1| peptide chain release factor 2 [Propionibacterium acnes HL053PA1]
gi|314975668|gb|EFT19763.1| peptide chain release factor 2 [Propionibacterium acnes HL045PA1]
gi|314978052|gb|EFT22146.1| peptide chain release factor 2 [Propionibacterium acnes HL072PA2]
gi|314984148|gb|EFT28240.1| peptide chain release factor 2 [Propionibacterium acnes HL005PA1]
gi|314989571|gb|EFT33662.1| peptide chain release factor 2 [Propionibacterium acnes HL005PA3]
gi|315080944|gb|EFT52920.1| peptide chain release factor 2 [Propionibacterium acnes HL078PA1]
gi|315084867|gb|EFT56843.1| peptide chain release factor 2 [Propionibacterium acnes HL027PA2]
gi|315086040|gb|EFT58016.1| peptide chain release factor 2 [Propionibacterium acnes HL002PA3]
gi|315088241|gb|EFT60217.1| peptide chain release factor 2 [Propionibacterium acnes HL072PA1]
gi|315095727|gb|EFT67703.1| peptide chain release factor 2 [Propionibacterium acnes HL038PA1]
gi|315105991|gb|EFT77967.1| peptide chain release factor 2 [Propionibacterium acnes HL030PA1]
gi|327327935|gb|EGE69709.1| peptide chain release factor 2 [Propionibacterium acnes HL096PA3]
gi|327330072|gb|EGE71825.1| peptide chain release factor 2 [Propionibacterium acnes HL096PA2]
gi|327442693|gb|EGE89347.1| peptide chain release factor 2 [Propionibacterium acnes HL043PA1]
gi|327443908|gb|EGE90562.1| peptide chain release factor 2 [Propionibacterium acnes HL043PA2]
gi|327443976|gb|EGE90630.1| peptide chain release factor 2 [Propionibacterium acnes HL013PA2]
gi|328754956|gb|EGF68572.1| peptide chain release factor 2 [Propionibacterium acnes HL020PA1]
gi|328761406|gb|EGF74932.1| peptide chain release factor 2 [Propionibacterium acnes HL099PA1]
Length = 371
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 47/86 (54%), Gaps = 5/86 (5%)
Query: 33 NDGYHRNLVSNIDIYSTIPKIDEKDIQERFVR-----GSGPGGQAVAKTNNCVVLTHIPT 87
N G + + +++ + + D DI E +R SGPGGQ V T++ V LTH+PT
Sbjct: 211 NQGRRQTSFAGVEVLPVVEETDHVDIPESDLRVDVFHASGPGGQGVNTTDSAVRLTHLPT 270
Query: 88 GIVIKCHQSRSLSENRKTARELLVAQ 113
GIV+ C RS +N+ A +L A+
Sbjct: 271 GIVVSCQNERSQIQNKAAALRVLQAK 296
>gi|410447428|ref|ZP_11301524.1| peptide chain release factor 1 [SAR86 cluster bacterium SAR86E]
gi|409979703|gb|EKO36461.1| peptide chain release factor 1 [SAR86 cluster bacterium SAR86E]
Length = 362
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 42/63 (66%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
+ID+ +++ R SG GGQ V KT++ V LTHIPTG+V++C RS +N+ A LLV
Sbjct: 219 EIDKSELRVDTYRASGAGGQHVNKTDSAVRLTHIPTGVVVECQDDRSQHKNKAKAMALLV 278
Query: 112 AQW 114
A+
Sbjct: 279 AKL 281
>gi|422396770|ref|ZP_16476801.1| peptide chain release factor 2 [Propionibacterium acnes HL097PA1]
gi|327329965|gb|EGE71719.1| peptide chain release factor 2 [Propionibacterium acnes HL097PA1]
Length = 370
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 47/86 (54%), Gaps = 5/86 (5%)
Query: 33 NDGYHRNLVSNIDIYSTIPKIDEKDIQERFVR-----GSGPGGQAVAKTNNCVVLTHIPT 87
N G + + +++ + + D DI E +R SGPGGQ V T++ V LTH+PT
Sbjct: 210 NQGRRQTSFAGVEVLPVVEETDHVDIPESDLRVDVFHASGPGGQGVNTTDSAVRLTHLPT 269
Query: 88 GIVIKCHQSRSLSENRKTARELLVAQ 113
GIV+ C RS +N+ A +L A+
Sbjct: 270 GIVVSCQNERSQIQNKAAALRVLQAK 295
>gi|422390308|ref|ZP_16470403.1| peptide chain release factor 2 [Propionibacterium acnes HL103PA1]
gi|422459156|ref|ZP_16535804.1| peptide chain release factor 2 [Propionibacterium acnes HL050PA2]
gi|422465250|ref|ZP_16541857.1| peptide chain release factor 2 [Propionibacterium acnes HL060PA1]
gi|422564398|ref|ZP_16640049.1| peptide chain release factor 2 [Propionibacterium acnes HL082PA2]
gi|422575575|ref|ZP_16651113.1| peptide chain release factor 2 [Propionibacterium acnes HL001PA1]
gi|314923649|gb|EFS87480.1| peptide chain release factor 2 [Propionibacterium acnes HL001PA1]
gi|314967087|gb|EFT11186.1| peptide chain release factor 2 [Propionibacterium acnes HL082PA2]
gi|315092708|gb|EFT64684.1| peptide chain release factor 2 [Propionibacterium acnes HL060PA1]
gi|315103819|gb|EFT75795.1| peptide chain release factor 2 [Propionibacterium acnes HL050PA2]
gi|327327221|gb|EGE68997.1| peptide chain release factor 2 [Propionibacterium acnes HL103PA1]
Length = 371
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 47/86 (54%), Gaps = 5/86 (5%)
Query: 33 NDGYHRNLVSNIDIYSTIPKIDEKDIQERFVR-----GSGPGGQAVAKTNNCVVLTHIPT 87
N G + + +++ + + D DI E +R SGPGGQ V T++ V LTH+PT
Sbjct: 211 NQGRRQTSFAGVEVLPVVEETDHVDIPESDLRVDVFHASGPGGQGVNTTDSAVRLTHLPT 270
Query: 88 GIVIKCHQSRSLSENRKTARELLVAQ 113
GIV+ C RS +N+ A +L A+
Sbjct: 271 GIVVSCQNERSQIQNKAAALRVLQAK 296
>gi|167772028|ref|ZP_02444081.1| hypothetical protein ANACOL_03402 [Anaerotruncus colihominis DSM
17241]
gi|167665826|gb|EDS09956.1| peptide chain release factor 2 [Anaerotruncus colihominis DSM
17241]
Length = 374
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 48/78 (61%), Gaps = 5/78 (6%)
Query: 41 VSNIDIYSTIP-----KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQ 95
+++++ +P +I+ +DI+ R SG GGQ + KT++ V LTHIPTGIV+ C
Sbjct: 217 FASVEVLPELPDDHSVEINPEDIKMDVFRSSGAGGQHINKTSSAVRLTHIPTGIVVSCQN 276
Query: 96 SRSLSENRKTARELLVAQ 113
RS +NR+ ++L A+
Sbjct: 277 ERSQFQNREMCMKMLTAK 294
>gi|365963048|ref|YP_004944614.1| peptide chain release factor 2 [Propionibacterium acnes TypeIA2
P.acn31]
gi|365965288|ref|YP_004946853.1| peptide chain release factor 2 [Propionibacterium acnes TypeIA2
P.acn17]
gi|365974221|ref|YP_004955780.1| peptide chain release factor 2 [Propionibacterium acnes TypeIA2
P.acn33]
gi|365739729|gb|AEW83931.1| peptide chain release factor 2 [Propionibacterium acnes TypeIA2
P.acn31]
gi|365741969|gb|AEW81663.1| peptide chain release factor 2 [Propionibacterium acnes TypeIA2
P.acn17]
gi|365744220|gb|AEW79417.1| peptide chain release factor 2 [Propionibacterium acnes TypeIA2
P.acn33]
Length = 367
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 47/86 (54%), Gaps = 5/86 (5%)
Query: 33 NDGYHRNLVSNIDIYSTIPKIDEKDIQERFVR-----GSGPGGQAVAKTNNCVVLTHIPT 87
N G + + +++ + + D DI E +R SGPGGQ V T++ V LTH+PT
Sbjct: 207 NQGRRQTSFAGVEVLPVVEETDHVDIPESDLRVDVFHASGPGGQGVNTTDSAVRLTHLPT 266
Query: 88 GIVIKCHQSRSLSENRKTARELLVAQ 113
GIV+ C RS +N+ A +L A+
Sbjct: 267 GIVVSCQNERSQIQNKAAALRVLQAK 292
>gi|256390605|ref|YP_003112169.1| peptide chain release factor 2 [Catenulispora acidiphila DSM 44928]
gi|256356831|gb|ACU70328.1| peptide chain release factor 2 [Catenulispora acidiphila DSM 44928]
Length = 368
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 62/123 (50%), Gaps = 25/123 (20%)
Query: 33 NDGYHRNLVSNIDIYSTIPKIDEKDIQER-----FVRGSGPGGQAVAKTNNCVVLTHIPT 87
N G + + +++ + + D DI E R SGPGGQ V T++ V +TH+P+
Sbjct: 207 NQGRRQTSFAGVEVVPVVEQSDHVDIPEDELRVDVYRSSGPGGQGVNTTDSAVRITHLPS 266
Query: 88 GIVIKCHQSRSLSENRKTARELLVAQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKLD 147
GIV+ C RS +NR +A +L A ++ ++RR E+++ K+D
Sbjct: 267 GIVVSCQNERSQIQNRASAMAVLQA-----------------KLLQRRR---EEEQAKMD 306
Query: 148 ALK 150
ALK
Sbjct: 307 ALK 309
>gi|50842838|ref|YP_056065.1| peptide chain release factor 2 [Propionibacterium acnes KPA171202]
gi|289426937|ref|ZP_06428661.1| peptide chain release factor 2 [Propionibacterium acnes J165]
gi|295130890|ref|YP_003581553.1| peptide chain release factor 2 [Propionibacterium acnes SK137]
gi|335051297|ref|ZP_08544223.1| peptide chain release factor 2 [Propionibacterium sp. 409-HC1]
gi|335053701|ref|ZP_08546532.1| peptide chain release factor 2 [Propionibacterium sp. 434-HC2]
gi|342213500|ref|ZP_08706225.1| peptide chain release factor 2 [Propionibacterium sp. CC003-HC2]
gi|354607317|ref|ZP_09025287.1| peptide chain release factor 2 [Propionibacterium sp. 5_U_42AFAA]
gi|386024313|ref|YP_005942618.1| peptide chain release factor 2 [Propionibacterium acnes 266]
gi|387503733|ref|YP_005944962.1| peptide chain release factor 2 [Propionibacterium acnes 6609]
gi|407935764|ref|YP_006851406.1| peptide chain release factor 2 [Propionibacterium acnes C1]
gi|417929478|ref|ZP_12572862.1| peptide chain release factor 2 [Propionibacterium acnes SK182]
gi|81611548|sp|Q6A808.1|RF2_PROAC RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|50840440|gb|AAT83107.1| peptide chain release factor 2 [Propionibacterium acnes KPA171202]
gi|289159877|gb|EFD08057.1| peptide chain release factor 2 [Propionibacterium acnes J165]
gi|291375816|gb|ADD99670.1| peptide chain release factor 2 [Propionibacterium acnes SK137]
gi|332675771|gb|AEE72587.1| peptide chain release factor 2 [Propionibacterium acnes 266]
gi|333766370|gb|EGL43676.1| peptide chain release factor 2 [Propionibacterium sp. 434-HC2]
gi|333767186|gb|EGL44444.1| peptide chain release factor 2 [Propionibacterium sp. 409-HC1]
gi|335277778|gb|AEH29683.1| peptide chain release factor 2 [Propionibacterium acnes 6609]
gi|340769044|gb|EGR91569.1| peptide chain release factor 2 [Propionibacterium sp. CC003-HC2]
gi|340773601|gb|EGR96093.1| peptide chain release factor 2 [Propionibacterium acnes SK182]
gi|353557432|gb|EHC26801.1| peptide chain release factor 2 [Propionibacterium sp. 5_U_42AFAA]
gi|407904345|gb|AFU41175.1| peptide chain release factor 2 [Propionibacterium acnes C1]
gi|456738476|gb|EMF63043.1| peptide chain release factor 2 [Propionibacterium acnes FZ1/2/0]
Length = 368
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 47/86 (54%), Gaps = 5/86 (5%)
Query: 33 NDGYHRNLVSNIDIYSTIPKIDEKDIQERFVR-----GSGPGGQAVAKTNNCVVLTHIPT 87
N G + + +++ + + D DI E +R SGPGGQ V T++ V LTH+PT
Sbjct: 208 NQGRRQTSFAGVEVLPVVEETDHVDIPESDLRVDVFHASGPGGQGVNTTDSAVRLTHLPT 267
Query: 88 GIVIKCHQSRSLSENRKTARELLVAQ 113
GIV+ C RS +N+ A +L A+
Sbjct: 268 GIVVSCQNERSQIQNKAAALRVLQAK 293
>gi|417931673|ref|ZP_12575038.1| peptide chain release factor 2 [Propionibacterium acnes
SK182B-JCVI]
gi|340775616|gb|EGR97669.1| peptide chain release factor 2 [Propionibacterium acnes
SK182B-JCVI]
Length = 368
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 47/86 (54%), Gaps = 5/86 (5%)
Query: 33 NDGYHRNLVSNIDIYSTIPKIDEKDIQERFVR-----GSGPGGQAVAKTNNCVVLTHIPT 87
N G + + +++ + + D DI E +R SGPGGQ V T++ V LTH+PT
Sbjct: 208 NQGRRQTSFAGVEVLPVVEETDHVDIPESDLRVDVFHASGPGGQGVNTTDSAVRLTHLPT 267
Query: 88 GIVIKCHQSRSLSENRKTARELLVAQ 113
GIV+ C RS +N+ A +L A+
Sbjct: 268 GIVVSCQNERSQIQNKAAALRVLQAK 293
>gi|422438432|ref|ZP_16515276.1| peptide chain release factor 2 [Propionibacterium acnes HL092PA1]
gi|422493656|ref|ZP_16569956.1| peptide chain release factor 2 [Propionibacterium acnes HL086PA1]
gi|422516616|ref|ZP_16592725.1| peptide chain release factor 2 [Propionibacterium acnes HL110PA2]
gi|422524027|ref|ZP_16600036.1| peptide chain release factor 2 [Propionibacterium acnes HL053PA2]
gi|422531989|ref|ZP_16607935.1| peptide chain release factor 2 [Propionibacterium acnes HL110PA1]
gi|422545058|ref|ZP_16620888.1| peptide chain release factor 2 [Propionibacterium acnes HL082PA1]
gi|313792395|gb|EFS40490.1| peptide chain release factor 2 [Propionibacterium acnes HL110PA1]
gi|313801469|gb|EFS42718.1| peptide chain release factor 2 [Propionibacterium acnes HL110PA2]
gi|313838232|gb|EFS75946.1| peptide chain release factor 2 [Propionibacterium acnes HL086PA1]
gi|314963179|gb|EFT07279.1| peptide chain release factor 2 [Propionibacterium acnes HL082PA1]
gi|315078242|gb|EFT50285.1| peptide chain release factor 2 [Propionibacterium acnes HL053PA2]
gi|327453496|gb|EGF00151.1| peptide chain release factor 2 [Propionibacterium acnes HL092PA1]
Length = 371
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 47/86 (54%), Gaps = 5/86 (5%)
Query: 33 NDGYHRNLVSNIDIYSTIPKIDEKDIQERFVR-----GSGPGGQAVAKTNNCVVLTHIPT 87
N G + + +++ + + D DI E +R SGPGGQ V T++ V LTH+PT
Sbjct: 211 NQGRRQTSFAGVEVLPVVEETDHVDIPESDLRVDVFHASGPGGQGVNTTDSAVRLTHLPT 270
Query: 88 GIVIKCHQSRSLSENRKTARELLVAQ 113
GIV+ C RS +N+ A +L A+
Sbjct: 271 GIVVSCQNERSQIQNKAAALRVLQAK 296
>gi|154248977|ref|YP_001409802.1| peptide chain release factor 1 [Fervidobacterium nodosum Rt17-B1]
gi|154152913|gb|ABS60145.1| peptide chain release factor 1 [Fervidobacterium nodosum Rt17-B1]
Length = 347
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 45/73 (61%), Gaps = 5/73 (6%)
Query: 41 VSNIDIYSTIPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLS 100
+ ++D+Y ID KDI+ R SG GGQ V KT + + +THIPTGIV+ C RS
Sbjct: 195 MKDVDVY-----IDPKDIRIDTYRASGAGGQYVNKTESAIRITHIPTGIVVTCQSERSQH 249
Query: 101 ENRKTARELLVAQ 113
+N++ A +L A+
Sbjct: 250 QNKEKAMMVLRAK 262
>gi|419421503|ref|ZP_13961731.1| peptide chain release factor 2 [Propionibacterium acnes PRP-38]
gi|379977994|gb|EIA11319.1| peptide chain release factor 2 [Propionibacterium acnes PRP-38]
Length = 367
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 47/86 (54%), Gaps = 5/86 (5%)
Query: 33 NDGYHRNLVSNIDIYSTIPKIDEKDIQERFVR-----GSGPGGQAVAKTNNCVVLTHIPT 87
N G + + +++ + + D DI E +R SGPGGQ V T++ V LTH+PT
Sbjct: 207 NQGRRQTSFAGVEVLPVVEETDHVDIPESDLRVDVFHASGPGGQGVNTTDSAVRLTHLPT 266
Query: 88 GIVIKCHQSRSLSENRKTARELLVAQ 113
GIV+ C RS +N+ A +L A+
Sbjct: 267 GIVVSCQNERSQIQNKAAALRVLQAK 292
>gi|373948210|ref|ZP_09608171.1| Peptide chain release factor 1 [Shewanella baltica OS183]
gi|373884810|gb|EHQ13702.1| Peptide chain release factor 1 [Shewanella baltica OS183]
Length = 363
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 54/97 (55%), Gaps = 15/97 (15%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
I+ D++ R SG GGQ V KT++ + +THIPTGIV++C RS +NR A +L
Sbjct: 219 INPADLKVDTFRSSGAGGQHVNKTDSAIRITHIPTGIVVECQDQRSQHKNRAQAMSVLA- 277
Query: 113 QWDVQVNGEDSLNAQIRRI-DEKRRATQEQKKRKLDA 148
A+I+ + DEKRR+ +E +R L A
Sbjct: 278 -------------ARIQALEDEKRRSAEETTRRSLVA 301
>gi|282853672|ref|ZP_06263009.1| peptide chain release factor 2 [Propionibacterium acnes J139]
gi|386071135|ref|YP_005986031.1| peptide chain release factor 2 [Propionibacterium acnes ATCC 11828]
gi|422465572|ref|ZP_16542165.1| peptide chain release factor 2 [Propionibacterium acnes HL110PA4]
gi|422468031|ref|ZP_16544570.1| peptide chain release factor 2 [Propionibacterium acnes HL110PA3]
gi|282583125|gb|EFB88505.1| peptide chain release factor 2 [Propionibacterium acnes J139]
gi|314983205|gb|EFT27297.1| peptide chain release factor 2 [Propionibacterium acnes HL110PA3]
gi|315092426|gb|EFT64402.1| peptide chain release factor 2 [Propionibacterium acnes HL110PA4]
gi|353455501|gb|AER06020.1| peptide chain release factor 2 [Propionibacterium acnes ATCC 11828]
Length = 368
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 47/86 (54%), Gaps = 5/86 (5%)
Query: 33 NDGYHRNLVSNIDIYSTIPKIDEKDIQERFVR-----GSGPGGQAVAKTNNCVVLTHIPT 87
N G + + +++ + + D DI E +R SGPGGQ V T++ V LTH+PT
Sbjct: 208 NQGRRQTSFAGVEVLPVVEETDHVDIPESDLRVDVFHASGPGGQGVNTTDSAVRLTHLPT 267
Query: 88 GIVIKCHQSRSLSENRKTARELLVAQ 113
GIV+ C RS +N+ A +L A+
Sbjct: 268 GIVVSCQNERSQIQNKAAALRVLQAK 293
>gi|117926919|ref|YP_867536.1| peptide chain release factor 1 [Magnetococcus marinus MC-1]
gi|226739111|sp|A0LDT7.1|RF1_MAGSM RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|117610675|gb|ABK46130.1| bacterial peptide chain release factor 1 (bRF-1) [Magnetococcus
marinus MC-1]
Length = 361
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
I++KD++ R SGPGGQ+V T++ V +TH+PTG+V+ C +S +N+ A ++L A
Sbjct: 218 IEDKDLRIDVYRSSGPGGQSVNTTDSAVRITHLPTGLVVICQDEKSQHKNKAKAMKVLQA 277
Query: 113 Q-WDVQVNGEDSLNAQIRR 130
+ D Q DS A+ R+
Sbjct: 278 RLLDAQQQAADSQRAEARK 296
>gi|392417582|ref|YP_006454187.1| bacterial peptide chain release factor 1 (bRF-1) [Mycobacterium
chubuense NBB4]
gi|390617358|gb|AFM18508.1| bacterial peptide chain release factor 1 (bRF-1) [Mycobacterium
chubuense NBB4]
Length = 358
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 52/91 (57%), Gaps = 6/91 (6%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
+IDE D++ R SG GGQ V T++ V +TH+PTGIV+ C RS +N+ A ++L
Sbjct: 217 QIDESDLRIDVYRSSGKGGQGVNTTDSAVRITHLPTGIVVTCQNERSQLQNKIRAMQVLA 276
Query: 112 AQWDV----QVNGEDSLN--AQIRRIDEKRR 136
A+ Q + E S + +QIR +D R
Sbjct: 277 ARLQALAEEQASAEASADRASQIRTVDRSER 307
>gi|422558585|ref|ZP_16634325.1| peptide chain release factor 2 [Propionibacterium acnes HL025PA2]
gi|328752610|gb|EGF66226.1| peptide chain release factor 2 [Propionibacterium acnes HL025PA2]
Length = 370
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 47/86 (54%), Gaps = 5/86 (5%)
Query: 33 NDGYHRNLVSNIDIYSTIPKIDEKDIQERFVR-----GSGPGGQAVAKTNNCVVLTHIPT 87
N G + + +++ + + D DI E +R SGPGGQ V T++ V LTH+PT
Sbjct: 210 NQGRRQTSFAGVEVLPVVEETDHVDIPESDLRVDVFHASGPGGQGVNTTDSAVRLTHLPT 269
Query: 88 GIVIKCHQSRSLSENRKTARELLVAQ 113
GIV+ C RS +N+ A +L A+
Sbjct: 270 GIVVSCQNERSQIQNKAAALRVLQAK 295
>gi|90020863|ref|YP_526690.1| peptide chain release factor 2 [Saccharophagus degradans 2-40]
gi|89950463|gb|ABD80478.1| bacterial peptide chain release factor 2 (bRF-2) [Saccharophagus
degradans 2-40]
Length = 347
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 44/70 (62%), Gaps = 5/70 (7%)
Query: 43 NIDIYSTIPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSEN 102
NIDI +I++ D++E R SG GGQ V KT++ V LTH PTGIV++C RS N
Sbjct: 211 NIDI-----EINKADVREDTYRASGAGGQHVNKTDSAVRLTHAPTGIVVQCQSERSQHSN 265
Query: 103 RKTARELLVA 112
R A ++L A
Sbjct: 266 RDKAWKMLRA 275
>gi|238019424|ref|ZP_04599850.1| hypothetical protein VEIDISOL_01293 [Veillonella dispar ATCC 17748]
gi|237864123|gb|EEP65413.1| hypothetical protein VEIDISOL_01293 [Veillonella dispar ATCC 17748]
Length = 330
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 49/77 (63%), Gaps = 1/77 (1%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
ID KD+Q R SG GGQ + KT++ V +TH PTGIV++C RS +NR+ A LL A
Sbjct: 194 IDMKDVQVDTYRASGAGGQHINKTDSAVRMTHRPTGIVVQCQTQRSQMQNREQALRLLRA 253
Query: 113 Q-WDVQVNGEDSLNAQI 128
+ +++++ + L QI
Sbjct: 254 KLFELELEKQAELKEQI 270
>gi|358339953|dbj|GAA47915.1| peptide chain release factor 1 [Clonorchis sinensis]
Length = 446
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 62/122 (50%), Gaps = 16/122 (13%)
Query: 48 STIPKID-------EKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLS 100
S IP D E+D+ F R SG GGQ V +T++ V LTHIPTG V+ C Q RS
Sbjct: 279 SVIPSSDKISIDLPERDLSWAFFRASGAGGQHVNRTDSAVRLTHIPTGTVVTCQQERSQH 338
Query: 101 ENRKTA----RELLV-AQWDVQVNGEDSL-NAQIRRID--EKRRATQEQKKRKLDA-LKK 151
N++ A RE LV ++ Q E SL QI +D EK R + R D L +
Sbjct: 339 ANKRIALGMLRERLVNSKVKSQTESERSLRRCQIGHLDRSEKVRTYNYPQDRITDHRLSR 398
Query: 152 AW 153
+W
Sbjct: 399 SW 400
>gi|256545449|ref|ZP_05472811.1| peptide chain release factor 2, programmed [Anaerococcus vaginalis
ATCC 51170]
gi|256398845|gb|EEU12460.1| peptide chain release factor 2, programmed [Anaerococcus vaginalis
ATCC 51170]
Length = 369
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 50/78 (64%), Gaps = 5/78 (6%)
Query: 41 VSNIDIYSTIP-----KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQ 95
+++DI+ + +ID KD++ R SG GGQ V KT++ V +THIPTG++
Sbjct: 218 FASVDIFPELNDDMSVEIDPKDLRIDTYRASGAGGQHVNKTDSAVRITHIPTGVIASSQA 277
Query: 96 SRSLSENRKTARELLVAQ 113
RS ++N++TA +LL+A+
Sbjct: 278 ERSQTQNKETAMKLLLAK 295
>gi|296814610|ref|XP_002847642.1| peptidyl-tRNA hydrolase domain-containing protein [Arthroderma otae
CBS 113480]
gi|238840667|gb|EEQ30329.1| peptidyl-tRNA hydrolase domain-containing protein [Arthroderma otae
CBS 113480]
Length = 247
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 64/137 (46%), Gaps = 42/137 (30%)
Query: 51 PKIDEKDIQERFVRGSGPGGQAVA------------------------------KTNNCV 80
P ID+ +I +++GSGPGGQ + KTN+ V
Sbjct: 75 PTIDDSEISGSYLKGSGPGGQKINEYFNKKKYPILYSKLIIHEHPYSAEDKCQNKTNSAV 134
Query: 81 VLTHIPTGIVIKCHQSRSLSENRKTARELLVAQWDVQVNGEDSLNAQIRRIDE------- 133
L HIPT V+KC +RS S+NRK A+++L + ++ G+ S A + + +
Sbjct: 135 QLIHIPTNTVVKCQATRSQSQNRKIAKQILAEKVELLEKGDQSRAAIVTNVKKKRKASKM 194
Query: 134 -----KRRATQEQKKRK 145
K RA +E+K++K
Sbjct: 195 KKSRRKYRALEEEKRKK 211
>gi|449136635|ref|ZP_21772010.1| peptide chain release factor 2 [Rhodopirellula europaea 6C]
gi|448884728|gb|EMB15205.1| peptide chain release factor 2 [Rhodopirellula europaea 6C]
Length = 337
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 42/61 (68%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
I++KD++E R SG GGQ V KT++ + LTHIPT V++C RS +NR TA ++L A
Sbjct: 192 IEKKDVREDTYRASGAGGQHVNKTDSAIRLTHIPTNTVVQCQNQRSQHQNRDTAWKMLRA 251
Query: 113 Q 113
+
Sbjct: 252 K 252
>gi|392944575|ref|ZP_10310217.1| peptide chain release factor 2 [Frankia sp. QA3]
gi|392287869|gb|EIV93893.1| peptide chain release factor 2 [Frankia sp. QA3]
Length = 366
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 40/61 (65%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
ID+KD++ R SGPGGQ V T++ V +TH+PTGIV+ C RS +N+ A +L A
Sbjct: 228 IDDKDLRIDIFRSSGPGGQGVNTTDSAVRITHLPTGIVVTCQNERSQLQNKAAAMIVLQA 287
Query: 113 Q 113
+
Sbjct: 288 K 288
>gi|25027860|ref|NP_737914.1| peptide chain release factor 1 [Corynebacterium efficiens YS-314]
gi|259506251|ref|ZP_05749153.1| peptide chain release factor 1 [Corynebacterium efficiens YS-314]
gi|81749553|sp|Q8FQ31.1|RF1_COREF RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|23493143|dbj|BAC18114.1| putative peptide chain release factor 1 [Corynebacterium efficiens
YS-314]
gi|259166155|gb|EEW50709.1| peptide chain release factor 1 [Corynebacterium efficiens YS-314]
Length = 358
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 41/61 (67%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
+IDEK+I+ R SG GGQ V T++ V +TH+PTGIV+ C + RS +NR A ++L
Sbjct: 217 EIDEKEIRVDVYRSSGKGGQGVNTTDSAVRITHLPTGIVVTCQKERSQIQNRARAMQVLA 276
Query: 112 A 112
A
Sbjct: 277 A 277
>gi|406908239|gb|EKD48805.1| Peptide chain release factor 2 [uncultured bacterium]
Length = 362
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 42/61 (68%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
+ID KD++ R G GGQ V KT++ V +THIP+GIV +C RS ++N++TA ++L
Sbjct: 228 EIDPKDLRIDTYRAGGAGGQHVNKTDSAVRITHIPSGIVTQCQNERSQTQNKETAMKMLF 287
Query: 112 A 112
A
Sbjct: 288 A 288
>gi|148653259|ref|YP_001280352.1| peptide chain release factor 1 [Psychrobacter sp. PRwf-1]
gi|172048528|sp|A5WFG1.1|RF1_PSYWF RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|148572343|gb|ABQ94402.1| bacterial peptide chain release factor 1 (bRF-1) [Psychrobacter sp.
PRwf-1]
Length = 364
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 47/73 (64%), Gaps = 1/73 (1%)
Query: 40 LVSNIDIYSTIPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSL 99
++ ++I T+ +++ DI+ R SG GGQ V T++ V LTHIPTG+V +C Q RS
Sbjct: 208 VMPEVEIDDTV-ELNPADIRMDTFRSSGAGGQHVNTTDSAVRLTHIPTGVVAECQQERSQ 266
Query: 100 SENRKTARELLVA 112
+NR A ++L+A
Sbjct: 267 HKNRAKAMQMLIA 279
>gi|160931692|ref|ZP_02079086.1| hypothetical protein CLOLEP_00523 [Clostridium leptum DSM 753]
gi|156869337|gb|EDO62709.1| peptide chain release factor 2 [Clostridium leptum DSM 753]
Length = 374
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 45/73 (61%), Gaps = 8/73 (10%)
Query: 49 TIPKIDE--------KDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLS 100
+P+I+E +DI+ R SG GGQ V KT++ V LTHIPTGIV+ C RS
Sbjct: 222 VMPEINEDVEVEIAPEDIKMDVYRASGAGGQKVNKTSSAVRLTHIPTGIVVSCQVERSQH 281
Query: 101 ENRKTARELLVAQ 113
+NR+ A ++L ++
Sbjct: 282 QNREVAMKMLASK 294
>gi|395203753|ref|ZP_10394846.1| peptide chain release factor 2 [Propionibacterium humerusii P08]
gi|422439222|ref|ZP_16516045.1| peptide chain release factor 2 [Propionibacterium acnes HL037PA3]
gi|422470709|ref|ZP_16547209.1| peptide chain release factor 2 [Propionibacterium acnes HL037PA2]
gi|422574464|ref|ZP_16650018.1| peptide chain release factor 2 [Propionibacterium acnes HL044PA1]
gi|313837551|gb|EFS75265.1| peptide chain release factor 2 [Propionibacterium acnes HL037PA2]
gi|314927570|gb|EFS91401.1| peptide chain release factor 2 [Propionibacterium acnes HL044PA1]
gi|314972490|gb|EFT16587.1| peptide chain release factor 2 [Propionibacterium acnes HL037PA3]
gi|328907839|gb|EGG27602.1| peptide chain release factor 2 [Propionibacterium humerusii P08]
Length = 371
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 47/86 (54%), Gaps = 5/86 (5%)
Query: 33 NDGYHRNLVSNIDIYSTIPKIDEKDIQERFVR-----GSGPGGQAVAKTNNCVVLTHIPT 87
N G + + +++ + + D DI E +R SGPGGQ V T++ V LTH+PT
Sbjct: 211 NQGRRQTSFAGVEVLPVVEETDHVDIPESDLRVDVFHASGPGGQGVNTTDSAVRLTHLPT 270
Query: 88 GIVIKCHQSRSLSENRKTARELLVAQ 113
GIV+ C RS +N+ A +L A+
Sbjct: 271 GIVVSCQNERSQIQNKAAALRVLQAK 296
>gi|288923233|ref|ZP_06417373.1| peptide chain release factor 2 [Frankia sp. EUN1f]
gi|288345407|gb|EFC79796.1| peptide chain release factor 2 [Frankia sp. EUN1f]
Length = 366
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 40/61 (65%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
IDEK+++ R SGPGGQ V T++ V +TH+PTGIV+ C RS +N+ A +L A
Sbjct: 228 IDEKELRIDIFRSSGPGGQGVNTTDSAVRITHLPTGIVVTCQNERSQLQNKAAAMMVLQA 287
Query: 113 Q 113
+
Sbjct: 288 K 288
>gi|242309101|ref|ZP_04808256.1| peptide chain release factor 2 [Helicobacter pullorum MIT 98-5489]
gi|239524525|gb|EEQ64391.1| peptide chain release factor 2 [Helicobacter pullorum MIT 98-5489]
Length = 364
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 41/59 (69%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELL 110
+I+EKD++ R SG GGQ + KT + + +THIPTGIV++C RS +N+ TA ++L
Sbjct: 230 EIEEKDLRIDTYRASGAGGQHINKTESAIRITHIPTGIVVQCQNDRSQHKNKATALKML 288
>gi|425735918|ref|ZP_18854229.1| peptide chain release factor 2 [Brevibacterium casei S18]
gi|425479152|gb|EKU46332.1| peptide chain release factor 2 [Brevibacterium casei S18]
Length = 372
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 55/105 (52%), Gaps = 16/105 (15%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
++DE D++ R SGPGGQ+V T++ V +THIPTG+V+ +S +NR+ A +L
Sbjct: 232 EVDENDLRIDVYRSSGPGGQSVNTTDSAVRITHIPTGVVVSMQNEKSQIQNREAAMRVL- 290
Query: 112 AQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKLDALKKAWKER 156
Q R ++ KR+ QKK +K +W ++
Sbjct: 291 ---------------QSRLLERKRQEEAAQKKELAGDIKASWGDQ 320
>gi|433649352|ref|YP_007294354.1| bacterial peptide chain release factor 1 (bRF-1) [Mycobacterium
smegmatis JS623]
gi|433299129|gb|AGB24949.1| bacterial peptide chain release factor 1 (bRF-1) [Mycobacterium
smegmatis JS623]
Length = 357
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 50/91 (54%), Gaps = 6/91 (6%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELL- 110
+IDE D++ R SG GGQ V T++ V +TH+PTGIV+ C RS +N+ A ++L
Sbjct: 217 QIDESDLRIDVYRSSGKGGQGVNTTDSAVRITHLPTGIVVTCQNERSQLQNKARALQVLA 276
Query: 111 -----VAQWDVQVNGEDSLNAQIRRIDEKRR 136
+A+ Q + +QIR +D R
Sbjct: 277 ARLQALAEEQAQADASADRASQIRTVDRSER 307
>gi|428164896|gb|EKX33906.1| hypothetical protein GUITHDRAFT_119889 [Guillardia theta CCMP2712]
Length = 168
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 50/90 (55%), Gaps = 5/90 (5%)
Query: 36 YHRNLVSNIDIYSTIPKIDE-----KDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIV 90
YH +S + + KI+E ++I+E FVRGSG GGQ + KT N V + H+PTG+
Sbjct: 24 YHNFDISQGKVDALFDKIEELGIKLEEIEESFVRGSGAGGQKINKTANNVQMKHLPTGLQ 83
Query: 91 IKCHQSRSLSENRKTARELLVAQWDVQVNG 120
+ C + R +NR A LV + + +G
Sbjct: 84 VSCQREREREKNRFIALRQLVEKIEAARSG 113
>gi|408829229|ref|ZP_11214119.1| peptide chain release factor 1 [Streptomyces somaliensis DSM 40738]
Length = 358
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 51/87 (58%), Gaps = 6/87 (6%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTA----- 106
+I+ D++ R SGPGGQ+V T++ V +TH+PTG+V C +S +N++ A
Sbjct: 218 EINPNDLRIDVYRSSGPGGQSVNTTDSAVRITHLPTGVVASCQNEKSQLQNKEQAMRILR 277
Query: 107 -RELLVAQWDVQVNGEDSLNAQIRRID 132
R L AQ + + N D+ +Q+R +D
Sbjct: 278 SRLLAAAQEEAERNAADARRSQVRTVD 304
>gi|404442941|ref|ZP_11008116.1| peptide chain release factor 1 [Mycobacterium vaccae ATCC 25954]
gi|403656367|gb|EJZ11181.1| peptide chain release factor 1 [Mycobacterium vaccae ATCC 25954]
Length = 357
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 49/91 (53%), Gaps = 6/91 (6%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
+IDE D++ R SG GGQ V T++ V +TH+PTGIV+ C RS +N+ A ++L
Sbjct: 217 QIDESDLRIDVYRSSGKGGQGVNTTDSAVRITHLPTGIVVTCQNERSQLQNKARAMQVLA 276
Query: 112 A------QWDVQVNGEDSLNAQIRRIDEKRR 136
A + Q + +QIR +D R
Sbjct: 277 ARLQALQEEQAQADASADRASQIRTVDRSER 307
>gi|336118678|ref|YP_004573449.1| peptide chain release factor 1 [Microlunatus phosphovorus NM-1]
gi|334686461|dbj|BAK36046.1| peptide chain release factor 1 [Microlunatus phosphovorus NM-1]
Length = 360
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 40/61 (65%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
+IDE D++ R SGPGGQ V T++ V +TH+P+GIV+ C RS +NR+ A +L
Sbjct: 218 EIDENDLRIDVYRSSGPGGQGVNTTDSAVRITHLPSGIVVSCQNERSQLQNREQAMRMLR 277
Query: 112 A 112
A
Sbjct: 278 A 278
>gi|88704041|ref|ZP_01101756.1| Peptide chain release factor 1 [Congregibacter litoralis KT71]
gi|88701868|gb|EAQ98972.1| Peptide chain release factor 1 [Congregibacter litoralis KT71]
Length = 361
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 49/80 (61%), Gaps = 1/80 (1%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
+I++ D++ R SG GGQ V KT++ V LTH+PTGIV++C RS +NR A LL
Sbjct: 218 EINKADLRVDTYRASGAGGQHVNKTDSAVRLTHLPTGIVVECQDERSQHKNRARAMSLLQ 277
Query: 112 AQWD-VQVNGEDSLNAQIRR 130
A+ D V + S A+ RR
Sbjct: 278 AKLDSVAEESQASEQAEQRR 297
>gi|56460033|ref|YP_155314.1| protein chain release factor A [Idiomarina loihiensis L2TR]
gi|61214579|sp|Q5QUZ8.1|RF1_IDILO RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|56179043|gb|AAV81765.1| Protein chain release factor A [Idiomarina loihiensis L2TR]
Length = 364
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 56/96 (58%), Gaps = 15/96 (15%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
+I+ D++ R SG GGQ V +T++ + LTHIPTG+V++C + RS +NR A +
Sbjct: 219 EINPADLRVDTYRASGAGGQHVNRTDSAIRLTHIPTGVVVECQEERSQHKNRAKAMSV-- 276
Query: 112 AQWDVQVNGEDSLNAQIRRI-DEKRRATQEQKKRKL 146
L A+I+R+ DEKR+A ++ +R L
Sbjct: 277 ------------LQARIQRLEDEKRQAEEDSTRRNL 300
>gi|407783481|ref|ZP_11130681.1| protein chain release factor B [Oceanibaculum indicum P24]
gi|407201606|gb|EKE71604.1| protein chain release factor B [Oceanibaculum indicum P24]
Length = 287
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 39/58 (67%)
Query: 55 EKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
EKD++ R SG GGQ V KT++ + +THIPTGIV++C RS +NR TA +L A
Sbjct: 148 EKDLRIDTYRASGAGGQHVNKTDSAIRITHIPTGIVVQCQSDRSQHKNRATAFSMLKA 205
>gi|358447048|ref|ZP_09157584.1| peptide chain release factor 1 [Corynebacterium casei UCMA 3821]
gi|356607022|emb|CCE55939.1| peptide chain release factor 1 [Corynebacterium casei UCMA 3821]
Length = 358
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 40/60 (66%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
IDEKDI+ R SG GGQ V T++ V LTH+PTG+V+ C + RS +N+ A ++L A
Sbjct: 218 IDEKDIRVDVYRSSGKGGQGVNTTDSAVRLTHLPTGLVVTCQRERSQIQNKARAMQVLQA 277
>gi|152967725|ref|YP_001363509.1| peptide chain release factor 2 [Kineococcus radiotolerans SRS30216]
gi|226726318|sp|A6WEK6.1|RF2_KINRD RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|151362242|gb|ABS05245.1| peptide chain release factor 2 [Kineococcus radiotolerans SRS30216]
Length = 367
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 48/86 (55%), Gaps = 5/86 (5%)
Query: 33 NDGYHRNLVSNIDIYSTIPKIDEKDIQERFVR-----GSGPGGQAVAKTNNCVVLTHIPT 87
N G + + +++ + + D D+ E VR SGPGGQ+V T++ V LTH+PT
Sbjct: 207 NQGRRQTSFAGVEVLPVVAETDHVDVPENEVRVDVYRSSGPGGQSVNTTDSAVRLTHLPT 266
Query: 88 GIVIKCHQSRSLSENRKTARELLVAQ 113
GIV+ C +S +N+ A +L A+
Sbjct: 267 GIVVTCQNEKSQLQNKAAAMRVLQAK 292
>gi|163784774|ref|ZP_02179571.1| peptide chain release factor RF-2 [Hydrogenivirga sp. 128-5-R1-1]
gi|159879956|gb|EDP73663.1| peptide chain release factor RF-2 [Hydrogenivirga sp. 128-5-R1-1]
Length = 348
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 52/92 (56%), Gaps = 9/92 (9%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
+I+E D++ R SG GGQ V KT++ V +THIPTGIV+ C RS +NR A ++L
Sbjct: 209 EINEDDLRIDTFRASGAGGQHVNKTDSAVRITHIPTGIVVSCQSERSQIQNRAKAMQMLK 268
Query: 112 AQWDVQVNGEDSLNAQIRRIDEKRRATQEQKK 143
A+ +I + EKR+ + +KK
Sbjct: 269 AKL---------YQLEIEKQKEKRKELEGEKK 291
>gi|436841995|ref|YP_007326373.1| Peptide chain release factor 2 [Desulfovibrio hydrothermalis AM13 =
DSM 14728]
gi|432170901|emb|CCO24272.1| Peptide chain release factor 2 [Desulfovibrio hydrothermalis AM13 =
DSM 14728]
Length = 311
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 60/111 (54%), Gaps = 10/111 (9%)
Query: 10 MRDRNLAGIRLLESQVTITRELR-----NDGYHRNLVSNIDIYSTIPK-----IDEKDIQ 59
+R + + L+ + I R +R G +++D+Y I + I ++DI+
Sbjct: 120 LRIQGMYAYGFLKGEAGIHRLIRISPFDASGRRHTSFASVDVYPEISQDIEIEIKDEDIR 179
Query: 60 ERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELL 110
R SGPGGQ V KTN+ V +TH+ T IV++C +S +N++TA ++L
Sbjct: 180 LDVFRASGPGGQHVNKTNSAVRITHLATNIVVQCQNEKSQLKNKETAMKVL 230
>gi|424862822|ref|ZP_18286735.1| peptide chain release factor 1 [SAR86 cluster bacterium SAR86A]
gi|400757443|gb|EJP71654.1| peptide chain release factor 1 [SAR86 cluster bacterium SAR86A]
Length = 361
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 42/65 (64%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
ID+ D++ R SG GGQ V KT++ V LTHIP+G+V++C RS +N++ A LL A
Sbjct: 219 IDKNDLRVDTFRASGAGGQHVNKTDSAVRLTHIPSGLVVECQDGRSQHKNKEKAMSLLAA 278
Query: 113 QWDVQ 117
+ Q
Sbjct: 279 KLKQQ 283
>gi|359769543|ref|ZP_09273301.1| peptide chain release factor 2 [Gordonia polyisoprenivorans NBRC
16320]
gi|359313059|dbj|GAB26134.1| peptide chain release factor 2 [Gordonia polyisoprenivorans NBRC
16320]
Length = 371
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 41/61 (67%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
IDE +++ R SGPGGQ+V T++ V LTH+PTGIV+ C +S +N+ +A +L A
Sbjct: 235 IDENELKVDVYRSSGPGGQSVNTTDSAVRLTHLPTGIVVTCQNEKSQLQNKASAMRVLQA 294
Query: 113 Q 113
+
Sbjct: 295 K 295
>gi|302865524|ref|YP_003834161.1| peptide chain release factor 2 [Micromonospora aurantiaca ATCC
27029]
gi|315502072|ref|YP_004080959.1| peptide chain release factor 2 [Micromonospora sp. L5]
gi|302568383|gb|ADL44585.1| peptide chain release factor 2 [Micromonospora aurantiaca ATCC
27029]
gi|315408691|gb|ADU06808.1| peptide chain release factor 2 [Micromonospora sp. L5]
Length = 373
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 47/85 (55%), Gaps = 5/85 (5%)
Query: 33 NDGYHRNLVSNIDIYSTIPKIDEKDIQERFVR-----GSGPGGQAVAKTNNCVVLTHIPT 87
N G + + +++ + D DI E VR SGPGGQ+V T++ V LTHIPT
Sbjct: 208 NQGRRQTSFAGVEVLPVTEQTDHIDIPENEVRVDVYRSSGPGGQSVNTTDSAVRLTHIPT 267
Query: 88 GIVIKCHQSRSLSENRKTARELLVA 112
GIV+ C +S +N+ +A +L A
Sbjct: 268 GIVVTCQNEKSQLQNKASAMRVLQA 292
>gi|308233692|ref|ZP_07664429.1| peptide chain release factor 2 [Atopobium vaginae DSM 15829]
gi|328943371|ref|ZP_08240836.1| peptide chain release factor RF2 [Atopobium vaginae DSM 15829]
gi|327491340|gb|EGF23114.1| peptide chain release factor RF2 [Atopobium vaginae DSM 15829]
Length = 375
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 44/75 (58%), Gaps = 5/75 (6%)
Query: 41 VSNIDIYSTIPK-----IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQ 95
+ +++ +P+ ID +DI+ SGPGGQ V T++ V +THIPTGIV+ C
Sbjct: 221 FAGVEVLPVLPQTIEVQIDTQDIRIDVYHASGPGGQGVNTTDSAVRITHIPTGIVVTCQN 280
Query: 96 SRSLSENRKTARELL 110
RS +N+ A ++L
Sbjct: 281 ERSQLQNKAAAMQIL 295
>gi|156086092|ref|XP_001610455.1| hypothetical protein [Babesia bovis T2Bo]
gi|154797708|gb|EDO06887.1| conserved hypothetical protein [Babesia bovis]
Length = 183
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 65/110 (59%), Gaps = 15/110 (13%)
Query: 54 DEKDIQERFVRGSGPGGQAVAKTNNCVVLTH----IPTGIVIKCHQSRSLSENRKTAREL 109
E ++E +++G+GPGGQ V K++NCV L + IV+KCH+ RSL +NR A +
Sbjct: 63 SEYPLREYYIKGTGPGGQKVNKSSNCVQLIRYSPALGVNIVVKCHKHRSLLDNRIEATRI 122
Query: 110 LVAQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKR--KLDALKKAWKERE 157
L+ + D ++ AQ R + R+A ++ K+R KL A +KA K+ E
Sbjct: 123 LLRRLD------QAVTAQSRAL---RQAEEKSKRRILKLTAAEKARKKFE 163
>gi|407642421|ref|YP_006806180.1| peptide chain release factor 1 [Nocardia brasiliensis ATCC 700358]
gi|407305305|gb|AFT99205.1| peptide chain release factor 1 [Nocardia brasiliensis ATCC 700358]
Length = 356
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 51/91 (56%), Gaps = 6/91 (6%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
+IDE D++ R SG GGQ V T++ V LTH+PTGIV+ C RS +N+ A ++L
Sbjct: 216 QIDESDLRVDVYRSSGKGGQGVNTTDSAVRLTHLPTGIVVTCQNERSQLQNKARAMQVLA 275
Query: 112 AQWDV----QVNGEDSLN--AQIRRIDEKRR 136
A+ Q + E + +QIR +D R
Sbjct: 276 ARLQALAEEQADQEAAAGRASQIRTVDRSER 306
>gi|375093798|ref|ZP_09740063.1| peptide chain release factor 2 [Saccharomonospora marina XMU15]
gi|374654531|gb|EHR49364.1| peptide chain release factor 2 [Saccharomonospora marina XMU15]
Length = 384
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 41/61 (67%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
+ EKDI+ R SGPGGQ+V T++ V +TH+PTGIV+ C +S +N+ A ++L A
Sbjct: 248 VPEKDIRVDVYRSSGPGGQSVNTTDSAVRITHLPTGIVVSCQNEKSQLQNKAAAMKVLQA 307
Query: 113 Q 113
+
Sbjct: 308 K 308
>gi|408792601|ref|ZP_11204211.1| peptide chain release factor 2 [Leptospira meyeri serovar Hardjo
str. Went 5]
gi|408464011|gb|EKJ87736.1| peptide chain release factor 2 [Leptospira meyeri serovar Hardjo
str. Went 5]
Length = 375
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 40/60 (66%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
I+EKD++ R SG GGQ V T++ V +THIPTG+V+ C RS +NR TA ++L A
Sbjct: 235 IEEKDLRVDVYRSSGAGGQHVNTTDSAVRITHIPTGVVVSCQMERSQIKNRDTAMKMLRA 294
>gi|296140715|ref|YP_003647958.1| peptide chain release factor 2 [Tsukamurella paurometabola DSM
20162]
gi|296028849|gb|ADG79619.1| peptide chain release factor 2 [Tsukamurella paurometabola DSM
20162]
Length = 371
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 48/86 (55%), Gaps = 5/86 (5%)
Query: 33 NDGYHRNLVSNIDIYSTIPKIDEKDIQERFVR-----GSGPGGQAVAKTNNCVVLTHIPT 87
N G + + +++ + D D+ E VR SGPGGQ+V T++ V LTHIPT
Sbjct: 210 NQGRRQTSFAEVEVLPVVETTDHIDVDENEVRVDVYRSSGPGGQSVNTTDSAVRLTHIPT 269
Query: 88 GIVIKCHQSRSLSENRKTARELLVAQ 113
GIV+ C +S +N+ A ++L A+
Sbjct: 270 GIVVTCQNEKSQLQNKVAAMKVLQAK 295
>gi|118581948|ref|YP_903198.1| class I peptide chain release factor [Pelobacter propionicus DSM
2379]
gi|118504658|gb|ABL01141.1| Class I peptide chain release factor [Pelobacter propionicus DSM
2379]
Length = 109
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 44/68 (64%)
Query: 48 STIPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTAR 107
+T+ +I E+DI+ + R SGPGGQ T++ V + H+PTGIV + +SRS S NR+ A
Sbjct: 2 TTMVEIREEDIRIEYYRASGPGGQHRNTTDSAVRIRHLPTGIVAQASESRSQSRNRERAM 61
Query: 108 ELLVAQWD 115
E L A +
Sbjct: 62 ERLTAALE 69
>gi|378718798|ref|YP_005283687.1| peptide chain release factor 2 [Gordonia polyisoprenivorans VH2]
gi|375753501|gb|AFA74321.1| peptide chain release factor 2 [Gordonia polyisoprenivorans VH2]
Length = 371
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 41/61 (67%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
IDE +++ R SGPGGQ+V T++ V LTH+PTGIV+ C +S +N+ +A +L A
Sbjct: 235 IDENELKVDVYRSSGPGGQSVNTTDSAVRLTHLPTGIVVTCQNEKSQLQNKASAMRVLQA 294
Query: 113 Q 113
+
Sbjct: 295 K 295
>gi|357589082|ref|ZP_09127748.1| peptide chain release factor 1 [Corynebacterium nuruki S6-4]
Length = 361
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 41/61 (67%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
+ID+KD++ R SG GGQ V T++ V +TH+PTGIV+ C + RS +NR A ++L
Sbjct: 220 QIDDKDLRVDVYRSSGKGGQGVNTTDSAVRITHLPTGIVVTCQKERSQIQNRARAMQVLA 279
Query: 112 A 112
A
Sbjct: 280 A 280
>gi|374621851|ref|ZP_09694380.1| peptide chain release factor 1 [Ectothiorhodospira sp. PHS-1]
gi|373940981|gb|EHQ51526.1| peptide chain release factor 1 [Ectothiorhodospira sp. PHS-1]
Length = 360
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 42/64 (65%)
Query: 50 IPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTAREL 109
IP+I+ D++ R SG GGQ V +T++ V LTH+PTG+V++C RS +N+ A L
Sbjct: 216 IPEINPADLRIDTYRASGAGGQHVNRTDSAVRLTHLPTGLVVECQDERSQHKNKARAMSL 275
Query: 110 LVAQ 113
L A+
Sbjct: 276 LAAK 279
>gi|354613403|ref|ZP_09031324.1| Peptide chain release factor 2 [Saccharomonospora paurometabolica
YIM 90007]
gi|353222233|gb|EHB86550.1| Peptide chain release factor 2 [Saccharomonospora paurometabolica
YIM 90007]
Length = 368
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 41/62 (66%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
+I EKDI+ R SGPGGQ+V T++ V +TH+PTG+V+ C +S +N+ A +L
Sbjct: 231 EIPEKDIRVDVYRSSGPGGQSVNTTDSAVRITHLPTGVVVSCQNEKSQLQNKAVAMSVLQ 290
Query: 112 AQ 113
A+
Sbjct: 291 AK 292
>gi|430809726|ref|ZP_19436841.1| peptide chain release factor 1 [Cupriavidus sp. HMR-1]
gi|429497839|gb|EKZ96360.1| peptide chain release factor 1 [Cupriavidus sp. HMR-1]
Length = 360
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 49/80 (61%), Gaps = 1/80 (1%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
+I+ D++ R SG GGQ V KT++ V LTH+PTGIV++C RS N++ A ++L
Sbjct: 216 EINPSDLRVDTFRASGAGGQHVNKTDSAVRLTHLPTGIVVECQDDRSQHRNKEKAMKVLA 275
Query: 112 AQW-DVQVNGEDSLNAQIRR 130
A+ D+Q+ + A RR
Sbjct: 276 ARIKDMQLRAAQAKEASTRR 295
>gi|347758186|ref|YP_004865748.1| peptide chain release factor 1 [Micavibrio aeruginosavorus ARL-13]
gi|347590704|gb|AEP09746.1| peptide chain release factor 1 [Micavibrio aeruginosavorus ARL-13]
Length = 353
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 45/77 (58%), Gaps = 10/77 (12%)
Query: 43 NIDIYSTIPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSEN 102
++DI+ IDEKD++ R G GGQ V KT + V +THIPTG V C + +S +N
Sbjct: 207 DVDIH-----IDEKDLRIDVYRAQGAGGQHVNKTESAVRITHIPTGTVAACQEGKSQHKN 261
Query: 103 RKTARELL-----VAQW 114
R TA ++L AQW
Sbjct: 262 RDTAMKMLRSKLYEAQW 278
>gi|57239178|ref|YP_180314.1| peptide chain release factor 1 [Ehrlichia ruminantium str.
Welgevonden]
gi|58579136|ref|YP_197348.1| peptide chain release factor 1 [Ehrlichia ruminantium str.
Welgevonden]
gi|58617189|ref|YP_196388.1| peptide chain release factor 1 [Ehrlichia ruminantium str. Gardel]
gi|75432752|sp|Q5FGZ2.1|RF1_EHRRG RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|81557311|sp|Q5HB80.1|RF1_EHRRW RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|57161257|emb|CAH58178.1| peptide release factor 1 [Ehrlichia ruminantium str. Welgevonden]
gi|58416801|emb|CAI27914.1| Peptide chain release factor 1 (RF-1) [Ehrlichia ruminantium str.
Gardel]
gi|58417762|emb|CAI26966.1| Peptide chain release factor 1 (RF-1) [Ehrlichia ruminantium str.
Welgevonden]
Length = 359
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 53/80 (66%), Gaps = 1/80 (1%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
KIDEKD++ R SGPGGQ+V T++ V +THIP+GIV+ +S +N+ A ++L
Sbjct: 216 KIDEKDLRIDVYRSSGPGGQSVNTTDSAVRITHIPSGIVVIQQDEKSQHKNKNKALKVLR 275
Query: 112 AQ-WDVQVNGEDSLNAQIRR 130
A+ +D++ D+ +Q+R+
Sbjct: 276 ARLYDLEKQKRDAEISQLRK 295
>gi|289523200|ref|ZP_06440054.1| peptide chain release factor 1 [Anaerobaculum hydrogeniformans ATCC
BAA-1850]
gi|289503743|gb|EFD24907.1| peptide chain release factor 1 [Anaerobaculum hydrogeniformans ATCC
BAA-1850]
Length = 358
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 52/91 (57%), Gaps = 8/91 (8%)
Query: 48 STIPKIDEKDIQER-------FVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLS 100
+ +P+ DE D++ R R SG GGQ V T++ V +THIPTGIV+ C RS
Sbjct: 205 AVLPEPDEVDVEIRPEDLKIDTFRASGAGGQYVNMTDSAVRITHIPTGIVVTCQDERSQL 264
Query: 101 ENRKTARELLVAQ-WDVQVNGEDSLNAQIRR 130
+NR A +LL A+ +D+++ + A RR
Sbjct: 265 KNRAKAMQLLRAKLYDMEIRRQQEAMASERR 295
>gi|255280026|ref|ZP_05344581.1| peptide chain release factor 1 [Bryantella formatexigens DSM 14469]
gi|255269117|gb|EET62322.1| peptide chain release factor 1 [Marvinbryantia formatexigens DSM
14469]
Length = 357
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
IDEKDI+ +R SG GGQ V T++ V LTH PTGIV+ +S +N+ A LL A
Sbjct: 215 IDEKDIRIDVMRASGNGGQCVNTTDSAVRLTHYPTGIVVYSQTEKSQLQNKAKAFALLRA 274
Query: 113 Q-WDVQVNGEDSLNAQIRR 130
+ +D++ AQ+RR
Sbjct: 275 KLYDIEQQKAHDAEAQLRR 293
>gi|253827969|ref|ZP_04870854.1| peptide chain release factor 2 [Helicobacter canadensis MIT
98-5491]
gi|313142536|ref|ZP_07804729.1| peptide chain release factor 2 [Helicobacter canadensis MIT
98-5491]
gi|253511375|gb|EES90034.1| peptide chain release factor 2 [Helicobacter canadensis MIT
98-5491]
gi|313131567|gb|EFR49184.1| peptide chain release factor 2 [Helicobacter canadensis MIT
98-5491]
Length = 363
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 41/59 (69%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELL 110
+I+EKD++ R SG GGQ + KT + + +THIPTGIV++C RS +N+ TA ++L
Sbjct: 230 EIEEKDLRIDTYRASGAGGQHINKTESAIRITHIPTGIVVQCQNDRSQHKNKATALKML 288
>gi|342216846|ref|ZP_08709493.1| peptide chain release factor 2 [Peptoniphilus sp. oral taxon 375
str. F0436]
gi|341587736|gb|EGS31136.1| peptide chain release factor 2 [Peptoniphilus sp. oral taxon 375
str. F0436]
Length = 343
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 49/81 (60%), Gaps = 11/81 (13%)
Query: 41 VSNIDIYSTIPKIDE--------KDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIK 92
S++D+Y P++DE +D++ R SG GGQ V T++ V +THIPTGIV++
Sbjct: 218 FSSVDVY---PELDEDIEVDIKDEDLKIDTYRSSGAGGQHVNTTDSAVRITHIPTGIVVQ 274
Query: 93 CHQSRSLSENRKTARELLVAQ 113
C RS +NR+ A +L A+
Sbjct: 275 CQNERSQIQNREQAMNMLKAK 295
>gi|311739769|ref|ZP_07713603.1| peptide chain release factor RF2 [Corynebacterium pseudogenitalium
ATCC 33035]
gi|311304842|gb|EFQ80911.1| peptide chain release factor RF2 [Corynebacterium pseudogenitalium
ATCC 33035]
Length = 367
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 49/88 (55%), Gaps = 5/88 (5%)
Query: 31 LRNDGYHRNLVSNIDIYSTIPKIDEKDIQERFVR-----GSGPGGQAVAKTNNCVVLTHI 85
N G + + +++ + + D DI + VR SGPGGQ+V T++ V LTHI
Sbjct: 202 FDNQGRRQTSFAEVEVLPVVEQTDHIDIPDNDVRVDVYRSSGPGGQSVNTTDSAVRLTHI 261
Query: 86 PTGIVIKCHQSRSLSENRKTARELLVAQ 113
PTGIV+ C +S +N+ +A +L A+
Sbjct: 262 PTGIVVTCQNEKSQIQNKASAMRVLQAK 289
>gi|118473158|ref|YP_886446.1| peptide chain release factor 2 [Mycobacterium smegmatis str. MC2
155]
gi|399986457|ref|YP_006566806.1| peptide chain release factor 2 [Mycobacterium smegmatis str. MC2
155]
gi|166225108|sp|A0QU58.1|RF2_MYCS2 RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|118174445|gb|ABK75341.1| peptide chain release factor 2 [Mycobacterium smegmatis str. MC2
155]
gi|399231018|gb|AFP38511.1| Peptide chain release factor 2 [Mycobacterium smegmatis str. MC2
155]
Length = 368
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 41/62 (66%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
+I E DI+ R SGPGGQ+V T++ V LTHIPTGIV+ C +S +N+ +A +L
Sbjct: 231 EIPENDIRVDVYRSSGPGGQSVNTTDSAVRLTHIPTGIVVTCQNEKSQLQNKVSAMRVLQ 290
Query: 112 AQ 113
A+
Sbjct: 291 AK 292
>gi|406902800|gb|EKD45076.1| peptide chain release factor [uncultured bacterium]
Length = 134
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 43/69 (62%)
Query: 55 EKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVAQW 114
E+D+ E+F+ GSG GGQ + KT + V L H PT + +KC ++RS NR AR++L +
Sbjct: 21 EEDLDEKFILGSGHGGQKLQKTASTVFLKHRPTHLQVKCQETRSRDSNRFFARKILCEKI 80
Query: 115 DVQVNGEDS 123
++ E S
Sbjct: 81 TFLLHKEKS 89
>gi|376256646|ref|YP_005144537.1| peptide chain release factor 2 [Corynebacterium diphtheriae VA01]
gi|372119163|gb|AEX82897.1| peptide chain release factor 2 [Corynebacterium diphtheriae VA01]
Length = 369
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 49/88 (55%), Gaps = 5/88 (5%)
Query: 31 LRNDGYHRNLVSNIDIYSTIPKIDEKDIQERFVR-----GSGPGGQAVAKTNNCVVLTHI 85
N G + + I++ + + D DI + VR SGPGGQ+V T++ V LTHI
Sbjct: 204 FDNQGRRQTSFAEIEVLPVVEQTDHIDIPDSEVRVDVYRSSGPGGQSVNTTDSAVRLTHI 263
Query: 86 PTGIVIKCHQSRSLSENRKTARELLVAQ 113
PTGIV+ C +S +N+ +A +L A+
Sbjct: 264 PTGIVVTCQNEKSQIQNKASAMCVLQAK 291
>gi|359772386|ref|ZP_09275815.1| peptide chain release factor 2 [Gordonia effusa NBRC 100432]
gi|359310486|dbj|GAB18593.1| peptide chain release factor 2 [Gordonia effusa NBRC 100432]
Length = 371
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 40/61 (65%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
I+E D++ R SGPGGQ+V T++ V LTHIPTGIV+ C +S +N+ A +L A
Sbjct: 235 INENDLRVDVYRSSGPGGQSVNTTDSAVRLTHIPTGIVVTCQNEKSQLQNKAAAMRVLQA 294
Query: 113 Q 113
+
Sbjct: 295 K 295
>gi|406040117|ref|ZP_11047472.1| peptide chain release factor 1 [Acinetobacter ursingii DSM 16037 =
CIP 107286]
Length = 362
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 51/76 (67%), Gaps = 1/76 (1%)
Query: 40 LVSNIDIYSTIPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSL 99
++ +D+ +T+ +I+ D++ R SG GGQ + KT++ V +THIPTG+V++C + RS
Sbjct: 205 ILPEVDVDTTV-EINPADLRIDTYRASGAGGQHINKTDSAVRITHIPTGVVVECQEERSQ 263
Query: 100 SENRKTARELLVAQWD 115
+N+ A LLV++ +
Sbjct: 264 HKNKAKAMALLVSRLE 279
>gi|212697040|ref|ZP_03305168.1| hypothetical protein ANHYDRO_01605 [Anaerococcus hydrogenalis DSM
7454]
gi|212675815|gb|EEB35422.1| hypothetical protein ANHYDRO_01605 [Anaerococcus hydrogenalis DSM
7454]
Length = 238
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 50/78 (64%), Gaps = 5/78 (6%)
Query: 41 VSNIDIYSTIP-----KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQ 95
++IDI+ + +ID KD++ R SG GGQ V KT++ V +THIPTG++
Sbjct: 88 FASIDIFPELNDDMSVEIDPKDLRIDTYRASGAGGQHVNKTDSAVRITHIPTGVIASSQA 147
Query: 96 SRSLSENRKTARELLVAQ 113
RS ++N++TA +LL+A+
Sbjct: 148 ERSQTQNKETAMKLLLAK 165
>gi|383826565|ref|ZP_09981688.1| peptide chain release factor 1 [Mycobacterium xenopi RIVM700367]
gi|383332371|gb|EID10852.1| peptide chain release factor 1 [Mycobacterium xenopi RIVM700367]
Length = 357
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 50/91 (54%), Gaps = 6/91 (6%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
+IDE D++ R SG GGQ V T++ V +TH+PTGIV+ C RS +N+ A ++L
Sbjct: 217 QIDESDLRIDVYRSSGKGGQGVNTTDSAVRITHLPTGIVVTCQNERSQLQNKTRALQVLA 276
Query: 112 AQWDVQVNGEDSLNA------QIRRIDEKRR 136
A+ V + +A QIR +D R
Sbjct: 277 ARLQAMVEEQALADASADRASQIRTVDRSER 307
>gi|323143931|ref|ZP_08078589.1| peptide chain release factor 1 [Succinatimonas hippei YIT 12066]
gi|322416295|gb|EFY06971.1| peptide chain release factor 1 [Succinatimonas hippei YIT 12066]
Length = 364
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 43/65 (66%)
Query: 48 STIPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTAR 107
S P+++ D++ R SG GGQ + KT++ + +THIPTGIV++C RS NR+ A
Sbjct: 214 SKAPEVNPADLRIDTFRASGAGGQHINKTDSAIRITHIPTGIVVECQDERSQHRNRERAM 273
Query: 108 ELLVA 112
E+L++
Sbjct: 274 EVLLS 278
>gi|326330854|ref|ZP_08197155.1| peptide chain release factor 2 [Nocardioidaceae bacterium Broad-1]
gi|325951384|gb|EGD43423.1| peptide chain release factor 2 [Nocardioidaceae bacterium Broad-1]
Length = 372
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 36/55 (65%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTA 106
+IDE DI+ R SGPGGQ+V T++ V LTHIPTG V+ C +S +N+ A
Sbjct: 232 EIDENDIKVDVYRSSGPGGQSVNTTDSAVRLTHIPTGTVVSCQNEKSQLQNKAAA 286
>gi|255323776|ref|ZP_05364902.1| peptide chain release factor 2 [Corynebacterium tuberculostearicum
SK141]
gi|255298956|gb|EET78247.1| peptide chain release factor 2 [Corynebacterium tuberculostearicum
SK141]
Length = 367
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 49/88 (55%), Gaps = 5/88 (5%)
Query: 31 LRNDGYHRNLVSNIDIYSTIPKIDEKDIQERFVR-----GSGPGGQAVAKTNNCVVLTHI 85
N G + + +++ + + D DI + VR SGPGGQ+V T++ V LTHI
Sbjct: 202 FDNQGRRQTSFAEVEVLPVVEQTDHIDIPDNDVRVDVYRSSGPGGQSVNTTDSAVRLTHI 261
Query: 86 PTGIVIKCHQSRSLSENRKTARELLVAQ 113
PTGIV+ C +S +N+ +A +L A+
Sbjct: 262 PTGIVVTCQNEKSQIQNKASAMRVLQAK 289
>gi|332532477|ref|ZP_08408355.1| peptide chain release factor 1 [Pseudoalteromonas haloplanktis
ANT/505]
gi|332038120|gb|EGI74567.1| peptide chain release factor 1 [Pseudoalteromonas haloplanktis
ANT/505]
Length = 361
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 51/95 (53%), Gaps = 13/95 (13%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
+I+ D++ R SG GGQ V KT++ + LTHIPTG+V++C RS +NR A +L
Sbjct: 218 QINTADLKVDTFRASGAGGQHVNKTDSAIRLTHIPTGVVVECQDQRSQHKNRAKAMSVLA 277
Query: 112 AQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKL 146
A+ + DEKR A + ++R L
Sbjct: 278 ARLQ-------------QAEDEKRHAAEASERRDL 299
>gi|258405989|ref|YP_003198731.1| hypothetical protein Dret_1869 [Desulfohalobium retbaense DSM 5692]
gi|257798216|gb|ACV69153.1| hypothetical protein Dret_1869 [Desulfohalobium retbaense DSM 5692]
Length = 371
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 57/101 (56%), Gaps = 10/101 (9%)
Query: 20 LLESQVTITRELR-----NDGYHRNLVSNIDIYSTIPK-----IDEKDIQERFVRGSGPG 69
LL+++ I R +R G +++D+Y ++++DI+ R SGPG
Sbjct: 191 LLQAEKGIHRLIRISPFDTSGRRHTSFASVDVYPEAADDIEIDVNDEDIRVDVFRSSGPG 250
Query: 70 GQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELL 110
GQ V KT++ + +TH P+GIV++C +S N++TA ++L
Sbjct: 251 GQNVNKTSSAIRITHFPSGIVVQCQNEKSQRRNKETAMKIL 291
>gi|238063024|ref|ZP_04607733.1| peptide chain release factor 2 [Micromonospora sp. ATCC 39149]
gi|237884835|gb|EEP73663.1| peptide chain release factor 2 [Micromonospora sp. ATCC 39149]
Length = 373
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 47/85 (55%), Gaps = 5/85 (5%)
Query: 33 NDGYHRNLVSNIDIYSTIPKIDEKDIQERFVR-----GSGPGGQAVAKTNNCVVLTHIPT 87
N G + + +++ + D DI E VR SGPGGQ+V T++ V LTHIPT
Sbjct: 208 NQGRRQTSFAGVEVLPVTEQTDHIDIPENEVRVDVYRSSGPGGQSVNTTDSAVRLTHIPT 267
Query: 88 GIVIKCHQSRSLSENRKTARELLVA 112
GIV+ C +S +N+ +A +L A
Sbjct: 268 GIVVTCQNEKSQLQNKASALRVLQA 292
>gi|6323311|ref|NP_013383.1| hypothetical protein YLR281C [Saccharomyces cerevisiae S288c]
gi|74676369|sp|Q05863.1|YL281_YEAST RecName: Full=Uncharacterized peptide chain release factor-like
protein YLR281C, mitochondrial; Flags: Precursor
gi|596041|gb|AAB67327.1| Ylr281cp [Saccharomyces cerevisiae]
gi|45269753|gb|AAS56257.1| YLR281C [Saccharomyces cerevisiae]
gi|151940986|gb|EDN59367.1| conserved protein [Saccharomyces cerevisiae YJM789]
gi|190405338|gb|EDV08605.1| conserved hypothetical protein [Saccharomyces cerevisiae RM11-1a]
gi|256269833|gb|EEU05093.1| YLR281C-like protein [Saccharomyces cerevisiae JAY291]
gi|259148263|emb|CAY81510.1| EC1118_1L7_1343p [Saccharomyces cerevisiae EC1118]
gi|285813696|tpg|DAA09592.1| TPA: hypothetical protein YLR281C [Saccharomyces cerevisiae S288c]
Length = 155
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 45/75 (60%), Gaps = 5/75 (6%)
Query: 55 EKDIQERFVRGS-GPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTAR----EL 109
E E+F+ G GPGGQ + K N+ V L H PTGIV++C ++RS +NRK AR
Sbjct: 34 EAQCTEKFLHGGRGPGGQKINKCNSKVQLRHEPTGIVVECQETRSREQNRKLARLKLARE 93
Query: 110 LVAQWDVQVNGEDSL 124
L A +D + E++L
Sbjct: 94 LAASYDTMPSREEAL 108
>gi|392383093|ref|YP_005032290.1| peptide chain release factor 2 (RF-2) [Azospirillum brasilense
Sp245]
gi|356878058|emb|CCC98920.1| peptide chain release factor 2 (RF-2) [Azospirillum brasilense
Sp245]
Length = 319
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 41/61 (67%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
+I+EKD + R SG GGQ V KT++ + +TH+PTGIV+ C Q RS +NR A ++L
Sbjct: 177 EINEKDCRIDTFRASGAGGQHVNKTDSAIRITHLPTGIVVACQQERSQHKNRAKAWDMLR 236
Query: 112 A 112
A
Sbjct: 237 A 237
>gi|119361586|sp|Q1LIF3.2|RF1_RALME RecName: Full=Peptide chain release factor 1; Short=RF-1
Length = 360
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 49/80 (61%), Gaps = 1/80 (1%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
+I+ D++ R SG GGQ V KT++ V LTH+PTGIV++C RS N++ A ++L
Sbjct: 216 EINPSDLRVDTFRASGAGGQHVNKTDSAVRLTHLPTGIVVECQDDRSQHRNKEKAMKVLA 275
Query: 112 AQW-DVQVNGEDSLNAQIRR 130
A+ D+Q+ + A RR
Sbjct: 276 ARIKDMQLRAAQAKEANTRR 295
>gi|451945828|ref|YP_007466423.1| bacterial peptide chain release factor 2 (bRF-2) [Desulfocapsa
sulfexigens DSM 10523]
gi|451905176|gb|AGF76770.1| bacterial peptide chain release factor 2 (bRF-2) [Desulfocapsa
sulfexigens DSM 10523]
Length = 330
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 40/60 (66%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
IDEKD++ R SG GGQ V KT++ + +THIP+G+V++C RS NR A ++L +
Sbjct: 198 IDEKDLRVDTYRASGSGGQHVNKTDSAIRITHIPSGVVVQCQNERSQHRNRDMAMKMLAS 257
>gi|189911793|ref|YP_001963348.1| peptidyl-tRNA hydrolase [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Ames)']
gi|167776469|gb|ABZ94770.1| Peptidyl-tRNA hydrolase [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Ames)']
Length = 131
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 39/63 (61%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
I E D++E+FV+ SG GGQ V K VVL H+PTG +KC RS NR AR+LL
Sbjct: 27 IRESDLKEQFVKASGKGGQNVNKVATAVVLLHLPTGKQVKCSIYRSQGLNRYKARDLLCL 86
Query: 113 QWD 115
+ +
Sbjct: 87 ELE 89
>gi|349604376|gb|AEP99945.1| Peptide chain release factor 1, mitochondrial-like protein, partial
[Equus caballus]
Length = 365
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 58/105 (55%), Gaps = 14/105 (13%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
K+D KD++ R G GGQ V T++ V L H+PTG+V++C Q RS +N++TA +L
Sbjct: 214 KVDPKDLRIDTFRAKGAGGQHVNTTDSAVRLVHVPTGLVVECQQERSQIKNKETALRVLR 273
Query: 112 AQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKLDALKKAWKER 156
A+ Q+ I++ +R Q+Q RKL +A ER
Sbjct: 274 ARLYQQI------------IEKDKR--QQQSARKLQVGTRAQSER 304
>gi|381166791|ref|ZP_09876005.1| peptide chain release factor 1 [Phaeospirillum molischianum DSM
120]
gi|380684364|emb|CCG40817.1| peptide chain release factor 1 [Phaeospirillum molischianum DSM
120]
Length = 358
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 39/59 (66%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELL 110
+IDEKD++ R G GGQ+V T++ V +THIPTG+ + C Q +S +N+ TA LL
Sbjct: 216 QIDEKDLRVDVYRSQGSGGQSVNTTDSAVRVTHIPTGLAVACQQEKSQHKNKATAMTLL 274
>gi|297171258|gb|ADI22265.1| protein chain release factor B [uncultured Gemmatimonadales
bacterium HF0200_36I24]
gi|297171357|gb|ADI22361.1| protein chain release factor B [uncultured nuHF2 cluster bacterium
HF0500_02A10]
Length = 334
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 39/61 (63%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
+I E D++ R SG GGQ V KT++ + +THIPTGI + C Q RS NR TA ++L
Sbjct: 193 EIAESDLRVDTFRASGAGGQHVNKTDSAIRITHIPTGIAVSCQQERSQHMNRATAMKMLQ 252
Query: 112 A 112
A
Sbjct: 253 A 253
>gi|114776305|ref|ZP_01451350.1| peptide chain release factor 2 [Mariprofundus ferrooxydans PV-1]
gi|114553135|gb|EAU55533.1| peptide chain release factor 2 [Mariprofundus ferrooxydans PV-1]
Length = 372
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 54/104 (51%), Gaps = 12/104 (11%)
Query: 20 LLESQVTITRELRNDGY------HRNLVSNIDIYSTIPK-----IDEKDIQERFVRGSGP 68
L+++V + R +R Y H + S + Y I K ID D++ R SG
Sbjct: 192 FLKAEVGVHRLVRKSPYDSGNRRHTSFAS-VFAYPDIEKDIEIDIDPSDVRTDTYRASGA 250
Query: 69 GGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
GGQ + KT++ V LTH+PT IV++C RS +NR A +L A
Sbjct: 251 GGQHINKTDSAVRLTHVPTNIVVQCQNDRSQHKNRAAAWSMLKA 294
>gi|91792280|ref|YP_561931.1| peptide chain release factor 1 [Shewanella denitrificans OS217]
gi|119361603|sp|Q12QR8.1|RF1_SHEDO RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|91714282|gb|ABE54208.1| bacterial peptide chain release factor 1 (bRF-1) [Shewanella
denitrificans OS217]
Length = 361
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 54/97 (55%), Gaps = 15/97 (15%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
I+ D++ R SG GGQ V KT++ + +THIP+GI+++C RS +NR A +L
Sbjct: 219 INPADLKVDTFRASGAGGQHVNKTDSAIRITHIPSGIIVECQDQRSQHKNRAQAMSVLA- 277
Query: 113 QWDVQVNGEDSLNAQIRRI-DEKRRATQEQKKRKLDA 148
A+I+ I DEKRR+ +E +R L A
Sbjct: 278 -------------ARIQAIEDEKRRSAEETTRRSLVA 301
>gi|269219853|ref|ZP_06163707.1| peptide chain release factor 1 [Actinomyces sp. oral taxon 848 str.
F0332]
gi|269210758|gb|EEZ77098.1| peptide chain release factor 1 [Actinomyces sp. oral taxon 848 str.
F0332]
Length = 365
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 50/80 (62%), Gaps = 1/80 (1%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
+I + DI+ R SGPGGQ+V T++ V +THIPTG+V+ C +S +NR+ A +L
Sbjct: 224 EIADADIRVDVFRSSGPGGQSVNTTDSAVRITHIPTGLVVSCQDEKSQIKNREAAMRVLR 283
Query: 112 AQW-DVQVNGEDSLNAQIRR 130
A+ +Q+ + NA +RR
Sbjct: 284 ARLRQMQLEQQAEENAAMRR 303
>gi|32474334|ref|NP_867328.1| peptide chain release factor 2 [Rhodopirellula baltica SH 1]
gi|417300696|ref|ZP_12087893.1| peptide chain release factor 2 [Rhodopirellula baltica WH47]
gi|421613631|ref|ZP_16054704.1| peptide chain release factor 2 [Rhodopirellula baltica SH28]
gi|440716673|ref|ZP_20897177.1| Peptide chain release factor 2 [Rhodopirellula baltica SWK14]
gi|32444872|emb|CAD74874.1| peptide chain release factor 2 (RF-2) [Rhodopirellula baltica SH 1]
gi|327543020|gb|EGF29467.1| peptide chain release factor 2 [Rhodopirellula baltica WH47]
gi|408495590|gb|EKK00176.1| peptide chain release factor 2 [Rhodopirellula baltica SH28]
gi|436438170|gb|ELP31730.1| Peptide chain release factor 2 [Rhodopirellula baltica SWK14]
Length = 337
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 45/74 (60%), Gaps = 8/74 (10%)
Query: 48 STIPKIDE--------KDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSL 99
S P+ID+ KD++E R SG GGQ V KT++ + LTHIPT V++C RS
Sbjct: 179 SVSPEIDDSIEVNVEKKDVREDTYRASGAGGQHVNKTDSAIRLTHIPTNTVVQCQNQRSQ 238
Query: 100 SENRKTARELLVAQ 113
+NR TA ++L A+
Sbjct: 239 HQNRDTAWKMLRAK 252
>gi|359435121|ref|ZP_09225350.1| peptide chain release factor 1 [Pseudoalteromonas sp. BSi20652]
gi|357918258|dbj|GAA61599.1| peptide chain release factor 1 [Pseudoalteromonas sp. BSi20652]
Length = 361
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 51/95 (53%), Gaps = 13/95 (13%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
+I+ D++ R SG GGQ V KT++ + LTHIPTG+V++C RS +NR A +L
Sbjct: 218 QINTADLKVDTFRASGAGGQHVNKTDSAIRLTHIPTGVVVECQDQRSQHKNRAKAMSVLA 277
Query: 112 AQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKL 146
A+ + DEKR A + ++R L
Sbjct: 278 ARLQ-------------QAEDEKRHAAEASERRDL 299
>gi|380512649|ref|ZP_09856056.1| peptide chain release factor 2 [Xanthomonas sacchari NCPPB 4393]
Length = 302
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 42/71 (59%), Gaps = 5/71 (7%)
Query: 43 NIDIYSTIPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSEN 102
NIDI I+ D++ R SG GGQ V KT + V +TH+PTGIV+ C RS +N
Sbjct: 157 NIDI-----DINPADLKTDVYRSSGAGGQHVNKTESAVRITHVPTGIVVACQTGRSQHQN 211
Query: 103 RKTARELLVAQ 113
R A ++L A+
Sbjct: 212 RDNAMKMLAAK 222
>gi|226739120|sp|B8CQV2.1|RF1_SHEPW RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|212558114|gb|ACJ30568.1| Peptide chain release factor 1 [Shewanella piezotolerans WP3]
Length = 361
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 56/96 (58%), Gaps = 15/96 (15%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
+I++ D++ R SG GGQ V KT++ + +THIPTGIV++C RS +NR A +
Sbjct: 218 EINKADLKVDTFRASGAGGQHVNKTDSAIRITHIPTGIVVECQDQRSQHKNRAQAMSV-- 275
Query: 112 AQWDVQVNGEDSLNAQIRRI-DEKRRATQEQKKRKL 146
L+A+I+ + DEKRR+ ++ +R L
Sbjct: 276 ------------LSARIQAVEDEKRRSEEDSTRRNL 299
>gi|183221718|ref|YP_001839714.1| putative translation release factor [Leptospira biflexa serovar
Patoc strain 'Patoc 1 (Paris)']
gi|167780140|gb|ABZ98438.1| Putative translation release factor [Leptospira biflexa serovar
Patoc strain 'Patoc 1 (Paris)']
Length = 110
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 39/63 (61%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
I E D++E+FV+ SG GGQ V K VVL H+PTG +KC RS NR AR+LL
Sbjct: 6 IRESDLKEQFVKASGKGGQNVNKVATAVVLLHLPTGKQVKCSIYRSQGLNRYKARDLLCL 65
Query: 113 QWD 115
+ +
Sbjct: 66 ELE 68
>gi|429729535|ref|ZP_19264194.1| peptide chain release factor 1 [Corynebacterium durum F0235]
gi|429149559|gb|EKX92537.1| peptide chain release factor 1 [Corynebacterium durum F0235]
Length = 357
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 41/61 (67%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
+ID+KDI+ R SG GGQ V T++ V +TH+PTGIV+ C + RS +N+ A ++L
Sbjct: 217 EIDDKDIRVDVYRSSGKGGQGVNTTDSAVRITHLPTGIVVTCQKERSQIQNKARAMQVLA 276
Query: 112 A 112
A
Sbjct: 277 A 277
>gi|403724386|ref|ZP_10946024.1| peptide chain release factor 2 [Gordonia rhizosphera NBRC 16068]
gi|403205596|dbj|GAB90355.1| peptide chain release factor 2 [Gordonia rhizosphera NBRC 16068]
Length = 371
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 46/86 (53%), Gaps = 5/86 (5%)
Query: 33 NDGYHRNLVSNIDIYSTIPKIDEKDIQER-----FVRGSGPGGQAVAKTNNCVVLTHIPT 87
N G + + +++ + D DI E R SGPGGQ+V T++ V LTHIPT
Sbjct: 210 NQGRRQTSFAEVEVLPVVETTDHIDIAETDLRVDVYRSSGPGGQSVNTTDSAVRLTHIPT 269
Query: 88 GIVIKCHQSRSLSENRKTARELLVAQ 113
GIV+ C +S +N+ A +L A+
Sbjct: 270 GIVVTCQNEKSQLQNKAAAMRVLQAK 295
>gi|335055656|ref|YP_585342.3| peptide chain release factor RF-1 [Cupriavidus metallidurans CH34]
gi|93355984|gb|ABF10073.1| peptide chain release factor RF-1 [Cupriavidus metallidurans CH34]
Length = 371
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 49/80 (61%), Gaps = 1/80 (1%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
+I+ D++ R SG GGQ V KT++ V LTH+PTGIV++C RS N++ A ++L
Sbjct: 227 EINPSDLRVDTFRASGAGGQHVNKTDSAVRLTHLPTGIVVECQDDRSQHRNKEKAMKVLA 286
Query: 112 AQW-DVQVNGEDSLNAQIRR 130
A+ D+Q+ + A RR
Sbjct: 287 ARIKDMQLRAAQAKEANTRR 306
>gi|359455485|ref|ZP_09244704.1| peptide chain release factor 1 [Pseudoalteromonas sp. BSi20495]
gi|414071918|ref|ZP_11407876.1| peptide chain release factor 1 [Pseudoalteromonas sp. Bsw20308]
gi|358047482|dbj|GAA80953.1| peptide chain release factor 1 [Pseudoalteromonas sp. BSi20495]
gi|410805681|gb|EKS11689.1| peptide chain release factor 1 [Pseudoalteromonas sp. Bsw20308]
Length = 361
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 51/95 (53%), Gaps = 13/95 (13%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
+I+ D++ R SG GGQ V KT++ + LTHIPTG+V++C RS +NR A +L
Sbjct: 218 QINTADLKVDTFRASGAGGQHVNKTDSAIRLTHIPTGVVVECQDQRSQHKNRAKAMSVLA 277
Query: 112 AQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKL 146
A+ + DEKR A + ++R L
Sbjct: 278 ARLQ-------------QAEDEKRHAAEASERRDL 299
>gi|395204882|ref|ZP_10395822.1| peptide chain release factor 1 [Propionibacterium humerusii P08]
gi|328907544|gb|EGG27310.1| peptide chain release factor 1 [Propionibacterium humerusii P08]
Length = 361
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 40/69 (57%)
Query: 45 DIYSTIPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRK 104
D+ T ID DI+ R SGPGGQ V T++ V LTH+PTGIV C RS +N+
Sbjct: 208 DVDETEVDIDPADIRVDVYRSSGPGGQGVNTTDSAVRLTHLPTGIVASCQNERSQLQNKA 267
Query: 105 TARELLVAQ 113
A +L A+
Sbjct: 268 EAMRMLRAK 276
>gi|334564797|ref|ZP_08517788.1| peptide chain release factor 1 [Corynebacterium bovis DSM 20582]
Length = 360
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 41/61 (67%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
+ID+KDI+ R SG GGQ V T++ V +TH+PTGIV+ C + RS +N+ A ++L
Sbjct: 219 EIDDKDIRVDVYRSSGKGGQGVNTTDSAVRITHLPTGIVVTCQKERSQIQNKARAMQVLA 278
Query: 112 A 112
A
Sbjct: 279 A 279
>gi|297171663|gb|ADI22657.1| protein chain release factor B [uncultured Gemmatimonadales
bacterium HF0500_22O06]
Length = 356
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 39/60 (65%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
IDE D++ R SG GGQ V KT++ V +TH PTGIV C Q RS +NR TA ++L A
Sbjct: 219 IDESDLRIDTYRASGAGGQHVNKTDSAVRITHEPTGIVTTCQQERSQHKNRSTAMKMLRA 278
>gi|227503858|ref|ZP_03933907.1| peptide chain release factor 1 [Corynebacterium striatum ATCC 6940]
gi|227199481|gb|EEI79529.1| peptide chain release factor 1 [Corynebacterium striatum ATCC 6940]
Length = 358
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 42/63 (66%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
IDEKD++ R SG GGQ V T++ V +TH+PTG+V+ C + RS +N+ A ++L A
Sbjct: 218 IDEKDLRVDVYRSSGKGGQGVNTTDSAVRITHLPTGLVVTCQKERSQIQNKARALQVLQA 277
Query: 113 QWD 115
+ D
Sbjct: 278 RLD 280
>gi|270291033|ref|ZP_06197256.1| peptide chain release factor 1 [Pediococcus acidilactici 7_4]
gi|304385309|ref|ZP_07367654.1| peptide chain release factor RF1 [Pediococcus acidilactici DSM
20284]
gi|418069590|ref|ZP_12706867.1| peptide chain release factor 1 [Pediococcus acidilactici MA18/5M]
gi|427439443|ref|ZP_18924098.1| peptide chain release factor 1 [Pediococcus lolii NGRI 0510Q]
gi|270280429|gb|EFA26264.1| peptide chain release factor 1 [Pediococcus acidilactici 7_4]
gi|304328516|gb|EFL95737.1| peptide chain release factor RF1 [Pediococcus acidilactici DSM
20284]
gi|357536121|gb|EHJ20152.1| peptide chain release factor 1 [Pediococcus acidilactici MA18/5M]
gi|425788279|dbj|GAC44886.1| peptide chain release factor 1 [Pediococcus lolii NGRI 0510Q]
Length = 359
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 48/78 (61%), Gaps = 2/78 (2%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
+ID KDI+ R SG GGQ + KT++ V +TH+PTGIV+ RS +NR+ A +L
Sbjct: 216 EIDPKDIRTDVYRSSGAGGQHINKTSSAVRMTHLPTGIVVAMQDERSQQQNREKAMRILK 275
Query: 112 AQ-WD-VQVNGEDSLNAQ 127
A+ +D Q ED+ N +
Sbjct: 276 ARVYDYYQSQEEDAYNEE 293
>gi|359442056|ref|ZP_09231936.1| peptide chain release factor 1 [Pseudoalteromonas sp. BSi20429]
gi|392535322|ref|ZP_10282459.1| peptide chain release factor 1 [Pseudoalteromonas arctica A 37-1-2]
gi|358036068|dbj|GAA68185.1| peptide chain release factor 1 [Pseudoalteromonas sp. BSi20429]
Length = 361
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 51/95 (53%), Gaps = 13/95 (13%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
+I+ D++ R SG GGQ V KT++ + LTHIPTG+V++C RS +NR A +L
Sbjct: 218 QINTADLKVDTFRASGAGGQHVNKTDSAIRLTHIPTGVVVECQDQRSQHKNRAKAMSVLA 277
Query: 112 AQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKL 146
A+ + DEKR A + ++R L
Sbjct: 278 ARLQ-------------QAEDEKRHAAEASERRDL 299
>gi|313893701|ref|ZP_07827268.1| peptide chain release factor 2 [Veillonella sp. oral taxon 158 str.
F0412]
gi|313441715|gb|EFR60140.1| peptide chain release factor 2 [Veillonella sp. oral taxon 158 str.
F0412]
Length = 330
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 40/61 (65%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
ID KD+Q R SG GGQ + KT++ V +TH PTGIV++C RS +NR+ A LL A
Sbjct: 194 IDMKDVQVDTYRASGAGGQHINKTDSAVRMTHKPTGIVVQCQTQRSQMQNREQALRLLRA 253
Query: 113 Q 113
+
Sbjct: 254 K 254
>gi|300783176|ref|YP_003763467.1| peptide chain release factor RF-2 [Amycolatopsis mediterranei U32]
gi|384146402|ref|YP_005529218.1| peptide chain release factor RF-2 [Amycolatopsis mediterranei S699]
gi|399535062|ref|YP_006547724.1| peptide chain release factor RF-2 [Amycolatopsis mediterranei S699]
gi|299792690|gb|ADJ43065.1| peptide chain release factor RF-2 [Amycolatopsis mediterranei U32]
gi|340524556|gb|AEK39761.1| peptide chain release factor RF-2 [Amycolatopsis mediterranei S699]
gi|398315832|gb|AFO74779.1| peptide chain release factor RF-2 [Amycolatopsis mediterranei S699]
Length = 357
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 40/60 (66%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
+ EKDI+ R SGPGGQ+V T++ V +TH+PTGIV+ C +S +N+ A ++L A
Sbjct: 224 VAEKDIRVDVYRSSGPGGQSVNTTDSAVRITHLPTGIVVSCQNEKSQLQNKAAAMKVLQA 283
>gi|392949348|ref|ZP_10314931.1| Peptide chain release factor 1 [Lactobacillus pentosus KCA1]
gi|334882101|emb|CCB83057.1| peptide chain release factor 1 (RF-1) [Lactobacillus pentosus
MP-10]
gi|339639302|emb|CCC18542.1| peptide chain release factor 1 (RF-1) [Lactobacillus pentosus IG1]
gi|392435461|gb|EIW13402.1| Peptide chain release factor 1 [Lactobacillus pentosus KCA1]
Length = 360
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 38/60 (63%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
ID KDI+ R SG GGQ + KT++ V +TH+PTGIV+ RS +NR A E+L A
Sbjct: 218 IDPKDIRTDVFRSSGAGGQHINKTSSAVRMTHLPTGIVVSMQDQRSQQQNRAKAMEILRA 277
>gi|193222210|emb|CAL60419.2| Peptide chain release factor 1 (RF-1) [Herminiimonas
arsenicoxydans]
Length = 361
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
I+ D++ R SG GGQ + KT++ V +THIPTGIV++C RS +N+ +A ++L A
Sbjct: 218 INPADLRIDTYRASGAGGQHINKTDSAVRITHIPTGIVVECQDDRSQHKNKASALKVLAA 277
Query: 113 QW-DVQVNGEDSLNAQIRR 130
+ DVQ+ + S A R+
Sbjct: 278 RIKDVQLREQQSQEAATRK 296
>gi|421463881|ref|ZP_15912574.1| peptide chain release factor 1 [Acinetobacter radioresistens
WC-A-157]
gi|400206255|gb|EJO37232.1| peptide chain release factor 1 [Acinetobacter radioresistens
WC-A-157]
Length = 362
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 58/92 (63%), Gaps = 2/92 (2%)
Query: 40 LVSNIDIYSTIPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSL 99
++ +D+ +T+ I+ D++ R SG GGQ + KT++ V +THIPTG V++C + RS
Sbjct: 205 ILPEVDVDTTV-DINPADLRIDTYRASGAGGQHINKTDSAVRITHIPTGTVVECQEERSQ 263
Query: 100 SENRKTARELLVAQWD-VQVNGEDSLNAQIRR 130
+N+ A LLV++ + + ++S +++RR
Sbjct: 264 HKNKAKAMSLLVSRLENAKRAAQESATSEMRR 295
>gi|375137430|ref|YP_004998079.1| peptide chain release factor 2 [Mycobacterium rhodesiae NBB3]
gi|359818051|gb|AEV70864.1| peptide chain release factor 2 [Mycobacterium rhodesiae NBB3]
Length = 371
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 41/62 (66%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
+I E D++ R SGPGGQ+V T++ V LTHIPTGIV+ C +S +N+ +A +L
Sbjct: 234 EIPESDVRVDVYRSSGPGGQSVNTTDSAVRLTHIPTGIVVTCQNEKSQLQNKVSAMRVLQ 293
Query: 112 AQ 113
A+
Sbjct: 294 AK 295
>gi|389874937|ref|YP_006374293.1| peptide chain release factor RF-2 [Tistrella mobilis KA081020-065]
gi|388532117|gb|AFK57311.1| peptide chain release factor RF-2 [Tistrella mobilis KA081020-065]
Length = 321
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 47/77 (61%), Gaps = 5/77 (6%)
Query: 41 VSNIDIYSTIP-----KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQ 95
+ + +Y I +I +KD++ R SG GGQ V +T++ + +TH+PTGIV++C Q
Sbjct: 161 FAAVHVYPVIDDSIDIEILDKDLRIDTYRASGAGGQHVNRTDSAIRITHVPTGIVVQCQQ 220
Query: 96 SRSLSENRKTARELLVA 112
RS +NR TA +L A
Sbjct: 221 DRSQHKNRATAMGMLKA 237
>gi|333374725|ref|ZP_08466560.1| peptide chain release factor RF2 [Kingella kingae ATCC 23330]
gi|381400380|ref|ZP_09925350.1| peptide chain release factor 2 [Kingella kingae PYKK081]
gi|332974657|gb|EGK11574.1| peptide chain release factor RF2 [Kingella kingae ATCC 23330]
gi|380834600|gb|EIC14435.1| peptide chain release factor 2 [Kingella kingae PYKK081]
Length = 367
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 70/133 (52%), Gaps = 19/133 (14%)
Query: 20 LLESQVTITRELRNDGYHRN-----LVSNIDIYSTIP-----KIDEKDIQERFVRGSGPG 69
LL ++ + R +R + N S++ +Y + +I+ D++ R SG G
Sbjct: 193 LLRTETGVHRLVRYSPFDSNNKRHTSFSSVFVYPEVDDSFEVEINPADLRTDTYRASGAG 252
Query: 70 GQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVAQWDVQVNGEDSLNAQIR 129
GQ + KT++ V +THIPTGIV++ SRS ENR+ E+L ++ ++R
Sbjct: 253 GQHINKTDSAVRITHIPTGIVVQSQSSRSQHENRRIVMEMLRSKL---------FELEMR 303
Query: 130 RIDEKRRATQEQK 142
+ +E+++A +E K
Sbjct: 304 KRNEEKQALEEGK 316
>gi|255319517|ref|ZP_05360731.1| peptide chain release factor 1 [Acinetobacter radioresistens SK82]
gi|262378460|ref|ZP_06071617.1| peptide chain release factor 1 [Acinetobacter radioresistens SH164]
gi|421856391|ref|ZP_16288757.1| peptide chain release factor 1 [Acinetobacter radioresistens DSM
6976 = NBRC 102413]
gi|255303457|gb|EET82660.1| peptide chain release factor 1 [Acinetobacter radioresistens SK82]
gi|262299745|gb|EEY87657.1| peptide chain release factor 1 [Acinetobacter radioresistens SH164]
gi|403188089|dbj|GAB74958.1| peptide chain release factor 1 [Acinetobacter radioresistens DSM
6976 = NBRC 102413]
Length = 362
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 58/92 (63%), Gaps = 2/92 (2%)
Query: 40 LVSNIDIYSTIPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSL 99
++ +D+ +T+ I+ D++ R SG GGQ + KT++ V +THIPTG V++C + RS
Sbjct: 205 ILPEVDVDTTV-DINPADLRIDTYRASGAGGQHINKTDSAVRITHIPTGTVVECQEERSQ 263
Query: 100 SENRKTARELLVAQWD-VQVNGEDSLNAQIRR 130
+N+ A LLV++ + + ++S +++RR
Sbjct: 264 HKNKAKAMSLLVSRLENAKRAAQESATSEMRR 295
>gi|206889859|ref|YP_002249325.1| peptide chain release factor [Thermodesulfovibrio yellowstonii DSM
11347]
gi|206741797|gb|ACI20854.1| peptide chain release factor [Thermodesulfovibrio yellowstonii DSM
11347]
Length = 114
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/59 (49%), Positives = 39/59 (66%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
I E DI+E+F++ SG GGQ + KT+ V L HIP+ I +KC + RS NR AR +LV
Sbjct: 23 IKESDIEEKFIKCSGHGGQKLNKTSTGVYLKHIPSAIEVKCTKERSQGLNRFFARRMLV 81
>gi|190891331|ref|YP_001977873.1| peptide chain release factor 2 [Rhizobium etli CIAT 652]
gi|190696610|gb|ACE90695.1| peptide chain release factor 2 (rf-2) protein [Rhizobium etli CIAT
652]
Length = 342
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 55/102 (53%), Gaps = 10/102 (9%)
Query: 21 LESQVTITRELRNDGYHRNL-----VSNIDIYSTIP-----KIDEKDIQERFVRGSGPGG 70
L+++ + R +R Y N S+I +Y + +I+E D + R SG GG
Sbjct: 156 LKTESGVHRLVRISPYDSNARRHTSFSSIWVYPVVDDSINIEINESDCRIDTYRSSGAGG 215
Query: 71 QAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
Q V T++ V +THIPTGIV+ C Q RS +NR A E+L A
Sbjct: 216 QHVNTTDSAVRITHIPTGIVVACQQERSQHKNRAKAWEMLRA 257
>gi|443289014|ref|ZP_21028108.1| Peptide chain release factor RF-2 [Micromonospora lupini str. Lupac
08]
gi|385887692|emb|CCH16182.1| Peptide chain release factor RF-2 [Micromonospora lupini str. Lupac
08]
Length = 373
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 47/85 (55%), Gaps = 5/85 (5%)
Query: 33 NDGYHRNLVSNIDIYSTIPKIDEKDIQERFVR-----GSGPGGQAVAKTNNCVVLTHIPT 87
N G + + +++ + D DI E VR SGPGGQ+V T++ V LTHIPT
Sbjct: 208 NQGRRQTSFAGVEVLPVTEQTDHIDIPENEVRVDVYRSSGPGGQSVNTTDSAVRLTHIPT 267
Query: 88 GIVIKCHQSRSLSENRKTARELLVA 112
GIV+ C +S +N+ +A +L A
Sbjct: 268 GIVVTCQNEKSQLQNKASALRVLQA 292
>gi|330465934|ref|YP_004403677.1| peptide chain release factor 2 [Verrucosispora maris AB-18-032]
gi|328808905|gb|AEB43077.1| peptide chain release factor 2 [Verrucosispora maris AB-18-032]
Length = 373
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 47/85 (55%), Gaps = 5/85 (5%)
Query: 33 NDGYHRNLVSNIDIYSTIPKIDEKDIQER-----FVRGSGPGGQAVAKTNNCVVLTHIPT 87
N G + + +++ + + D DI E R SGPGGQ+V T++ V +THIPT
Sbjct: 208 NQGRRQTSFAGVEVLPVVEQTDSIDIPENEMRIDVYRSSGPGGQSVNTTDSAVRITHIPT 267
Query: 88 GIVIKCHQSRSLSENRKTARELLVA 112
GIV+ C +S +N+ +A +L A
Sbjct: 268 GIVVTCQNEKSQLQNKASALRVLQA 292
>gi|317153200|ref|YP_004121248.1| peptide chain release factor 2 [Desulfovibrio aespoeensis Aspo-2]
gi|316943451|gb|ADU62502.1| peptide chain release factor 2 [Desulfovibrio aespoeensis Aspo-2]
Length = 391
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 71/139 (51%), Gaps = 19/139 (13%)
Query: 14 NLAGIRLLESQVTITRELR-----NDGYHRNLVSNIDIYSTIP-----KIDEKDIQERFV 63
L LL+ + + R +R + G +++D+Y + ++ ++D++
Sbjct: 204 GLYSYGLLKGESGVHRLIRISPFDSSGRRHTSFASVDVYPDMDDDIEIEVRDEDLRIDVF 263
Query: 64 RGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVAQWDVQVNGEDS 123
R SGPGGQ+V KT++ V +TH+PTGIV +C +S N+ TA L+ A+
Sbjct: 264 RSSGPGGQSVNKTSSAVRITHLPTGIVAQCQNEKSQHRNKATALRLVKARL--------- 314
Query: 124 LNAQIRRIDEKRRATQEQK 142
++++I+E RR + K
Sbjct: 315 YERELQKIEESRRQDYQAK 333
>gi|397470686|ref|XP_003806948.1| PREDICTED: peptide chain release factor 1, mitochondrial isoform 2
[Pan paniscus]
Length = 468
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 58/105 (55%), Gaps = 14/105 (13%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
K+D KD++ R G GGQ V KT++ V L HIPTG+V++C Q RS +N++ A +L
Sbjct: 307 KLDPKDLRIDTFRAKGAGGQHVNKTDSAVRLVHIPTGLVVECQQERSQIKNKEIAFRVLR 366
Query: 112 AQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKLDALKKAWKER 156
A+ Q+ I++ +R Q+Q RKL +A ER
Sbjct: 367 ARLYQQI------------IEKDKR--QQQSARKLQVGTRAQSER 397
>gi|183600289|ref|ZP_02961782.1| hypothetical protein PROSTU_03848 [Providencia stuartii ATCC 25827]
gi|188020079|gb|EDU58119.1| putative peptide chain release factor H [Providencia stuartii ATCC
25827]
Length = 202
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 45/80 (56%)
Query: 31 LRNDGYHRNLVSNIDIYSTIPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIV 90
LR +N N+ +S I I+E DI+ F++ GPGGQ V KT + V H+ TGI
Sbjct: 79 LRPKHKRKNWFINVIRFSPIQTIEESDIEFEFIKAQGPGGQHVNKTCSAVRAKHLATGIS 138
Query: 91 IKCHQSRSLSENRKTARELL 110
+K RS N+K A++L+
Sbjct: 139 VKVQSERSQHANKKLAKQLI 158
>gi|194377328|dbj|BAG57612.1| unnamed protein product [Homo sapiens]
Length = 468
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 58/105 (55%), Gaps = 14/105 (13%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
K+D KD++ R G GGQ V KT++ V L HIPTG+V++C Q RS +N++ A +L
Sbjct: 307 KLDPKDLRIDTFRAKGAGGQHVNKTDSAVRLVHIPTGLVVECQQERSQIKNKEIAFRVLR 366
Query: 112 AQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKLDALKKAWKER 156
A+ Q+ I++ +R Q+Q RKL +A ER
Sbjct: 367 ARLYQQI------------IEKDKR--QQQSARKLQVGTRAQSER 397
>gi|397670128|ref|YP_006511663.1| peptide chain release factor 1 [Propionibacterium propionicum
F0230a]
gi|395140944|gb|AFN45051.1| peptide chain release factor 1 [Propionibacterium propionicum
F0230a]
Length = 355
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 38/59 (64%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELL 110
+I E D++ R SGPGGQ V T++ V +TH+PTG+V+ C RS +NR+ A LL
Sbjct: 213 EISESDLRIDVFRASGPGGQGVNTTDSAVRITHLPTGVVVSCQNERSQLQNREQAMRLL 271
>gi|134093473|ref|YP_001098548.1| peptide chain release factor 1 [Herminiimonas arsenicoxydans]
Length = 356
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
I+ D++ R SG GGQ + KT++ V +THIPTGIV++C RS +N+ +A ++L A
Sbjct: 213 INPADLRIDTYRASGAGGQHINKTDSAVRITHIPTGIVVECQDDRSQHKNKASALKVLAA 272
Query: 113 QW-DVQVNGEDSLNAQIRR 130
+ DVQ+ + S A R+
Sbjct: 273 RIKDVQLREQQSQEAATRK 291
>gi|111023366|ref|YP_706338.1| peptide chain release factor 2 [Rhodococcus jostii RHA1]
gi|397736801|ref|ZP_10503479.1| peptide chain release factor 2 [Rhodococcus sp. JVH1]
gi|123339715|sp|Q0S2Q6.1|RF2_RHOSR RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|110822896|gb|ABG98180.1| peptide chain release factor RF2 [Rhodococcus jostii RHA1]
gi|396927382|gb|EJI94613.1| peptide chain release factor 2 [Rhodococcus sp. JVH1]
Length = 368
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 48/86 (55%), Gaps = 5/86 (5%)
Query: 33 NDGYHRNLVSNIDIYSTIPKIDEKDIQERFVR-----GSGPGGQAVAKTNNCVVLTHIPT 87
N G + + +++ + D D+ E VR SGPGGQ+V T++ V LTHIPT
Sbjct: 206 NQGRRQTSFAEVEVLPVVETTDHIDVNENDVRVDVYRSSGPGGQSVNTTDSAVRLTHIPT 265
Query: 88 GIVIKCHQSRSLSENRKTARELLVAQ 113
GIV+ C +S +N+ +A +L A+
Sbjct: 266 GIVVTCQNEKSQLQNKVSAMRVLQAK 291
>gi|114561906|ref|YP_749419.1| peptide chain release factor 1 [Shewanella frigidimarina NCIMB 400]
gi|119361604|sp|Q087I4.1|RF1_SHEFN RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|114333199|gb|ABI70581.1| bacterial peptide chain release factor 1 (bRF-1) [Shewanella
frigidimarina NCIMB 400]
Length = 361
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 54/97 (55%), Gaps = 15/97 (15%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
I+ D++ R SG GGQ V KT++ + +THIP+GI+++C RS +NR A +L
Sbjct: 219 INAADLKVDTFRASGAGGQHVNKTDSAIRITHIPSGIIVECQDQRSQHKNRAQAMSVLA- 277
Query: 113 QWDVQVNGEDSLNAQIRRI-DEKRRATQEQKKRKLDA 148
A+I+ + DEKRR+ +E +R L A
Sbjct: 278 -------------ARIQAVEDEKRRSAEETTRRSLVA 301
>gi|456388853|gb|EMF54293.1| peptide chain release factor 1 [Streptomyces bottropensis ATCC
25435]
Length = 358
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 50/87 (57%), Gaps = 6/87 (6%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTA----- 106
+I D++ R SGPGGQ+V T++ V +TH+PTG+V C +S +N++ A
Sbjct: 218 EIHANDLRIDVYRSSGPGGQSVNTTDSAVRITHLPTGVVASCQNEKSQLQNKEQAMRILR 277
Query: 107 -RELLVAQWDVQVNGEDSLNAQIRRID 132
R L AQ + + N D+ +Q+R +D
Sbjct: 278 SRLLAAAQEEAEKNAADARRSQVRTVD 304
>gi|159036572|ref|YP_001535825.1| peptide chain release factor 2 [Salinispora arenicola CNS-205]
gi|189040003|sp|A8M3R1.1|RF2_SALAI RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|157915407|gb|ABV96834.1| peptide chain release factor 2 [Salinispora arenicola CNS-205]
Length = 373
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 47/85 (55%), Gaps = 5/85 (5%)
Query: 33 NDGYHRNLVSNIDIYSTIPKIDEKDIQER-----FVRGSGPGGQAVAKTNNCVVLTHIPT 87
N G + + +++ + + D DI E R SGPGGQ+V T++ V +THIPT
Sbjct: 208 NQGRRQTSFAGVEVLPVVEQTDHIDIPENEMRTDVYRSSGPGGQSVNTTDSAVRITHIPT 267
Query: 88 GIVIKCHQSRSLSENRKTARELLVA 112
GIV+ C +S +N+ +A +L A
Sbjct: 268 GIVVTCQNEKSQLQNKASALRVLQA 292
>gi|432343023|ref|ZP_19592235.1| peptide chain release factor 2 [Rhodococcus wratislaviensis IFP
2016]
gi|430771944|gb|ELB87760.1| peptide chain release factor 2 [Rhodococcus wratislaviensis IFP
2016]
Length = 368
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 48/86 (55%), Gaps = 5/86 (5%)
Query: 33 NDGYHRNLVSNIDIYSTIPKIDEKDIQERFVR-----GSGPGGQAVAKTNNCVVLTHIPT 87
N G + + +++ + D D+ E VR SGPGGQ+V T++ V LTHIPT
Sbjct: 206 NQGRRQTSFAEVEVLPVVETTDHIDVNENDVRVDVYRSSGPGGQSVNTTDSAVRLTHIPT 265
Query: 88 GIVIKCHQSRSLSENRKTARELLVAQ 113
GIV+ C +S +N+ +A +L A+
Sbjct: 266 GIVVTCQNEKSQLQNKVSAMRVLQAK 291
>gi|379734499|ref|YP_005328005.1| peptide chain release factor 2 [Blastococcus saxobsidens DD2]
gi|378782306|emb|CCG01966.1| Peptide chain release factor 2 [Blastococcus saxobsidens DD2]
Length = 370
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 46/85 (54%), Gaps = 5/85 (5%)
Query: 33 NDGYHRNLVSNIDIYSTIPKIDEKDIQER-----FVRGSGPGGQAVAKTNNCVVLTHIPT 87
N G + + +++ + + D +I E R SGPGGQ+V T++ V +THIPT
Sbjct: 207 NQGRRQTSFAGVEVLPVVEQTDHVEIPENEIRVDVFRSSGPGGQSVNTTDSAVRMTHIPT 266
Query: 88 GIVIKCHQSRSLSENRKTARELLVA 112
GIV+ C +S +NR A +L A
Sbjct: 267 GIVVSCQNEKSQIQNRAAALRVLQA 291
>gi|88800296|ref|ZP_01115863.1| peptide chain release factor 1 [Reinekea blandensis MED297]
gi|88777011|gb|EAR08219.1| peptide chain release factor 1 [Reinekea sp. MED297]
Length = 361
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 41/62 (66%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
+ID+ D++ R SG GGQ V KT++ + LTH+PTGIV++C RS +N+ A LL
Sbjct: 218 EIDKNDLRVDTFRASGAGGQHVNKTDSAIRLTHLPTGIVVECQDERSQHKNKARAMSLLA 277
Query: 112 AQ 113
A+
Sbjct: 278 AK 279
>gi|127513840|ref|YP_001095037.1| peptide chain release factor 1 [Shewanella loihica PV-4]
gi|166223603|sp|A3QH30.1|RF1_SHELP RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|126639135|gb|ABO24778.1| bacterial peptide chain release factor 1 (bRF-1) [Shewanella
loihica PV-4]
Length = 361
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 55/98 (56%), Gaps = 15/98 (15%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
+I+ D++ R SG GGQ V KT++ + +THIP+GIV++C RS +NR A +L
Sbjct: 218 EINPADLKVDTFRASGAGGQHVNKTDSAIRITHIPSGIVVECQDQRSQHKNRAQAMSVLA 277
Query: 112 AQWDVQVNGEDSLNAQIRRI-DEKRRATQEQKKRKLDA 148
A+I+ + DEKRR+ +E +R L A
Sbjct: 278 --------------ARIQAVEDEKRRSEEESTRRNLVA 301
>gi|402838400|ref|ZP_10886907.1| peptide chain release factor 2 [Eubacteriaceae bacterium OBRC8]
gi|402272877|gb|EJU22088.1| peptide chain release factor 2 [Eubacteriaceae bacterium OBRC8]
Length = 344
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 41/61 (67%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
I+ KD++ R SG GGQ V KT + + +THIPTG+V++C RS N+ TA ++L+A
Sbjct: 211 INPKDLKIDTYRSSGAGGQHVNKTESAIRITHIPTGVVVQCQNERSQFSNKDTAMKMLMA 270
Query: 113 Q 113
+
Sbjct: 271 K 271
>gi|161349962|ref|YP_047013.2| peptide chain release factor 1 [Acinetobacter sp. ADP1]
gi|61214614|sp|Q6F9S2.2|RF1_ACIAD RecName: Full=Peptide chain release factor 1; Short=RF-1
Length = 362
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 60/92 (65%), Gaps = 2/92 (2%)
Query: 40 LVSNIDIYSTIPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSL 99
++ +D+ +T+ +I+ D++ R SG GGQ + KT++ V +TH+PTG+V++C + RS
Sbjct: 205 ILPEVDVDTTV-EINPADLRIDTYRASGAGGQHINKTDSAVRITHVPTGVVVECQEERSQ 263
Query: 100 SENRKTARELLVAQWD-VQVNGEDSLNAQIRR 130
+N+ A LLV++ + + +++ +++RR
Sbjct: 264 HKNKAKAMALLVSRLENAKRAAQETATSEMRR 295
>gi|372267998|ref|ZP_09504046.1| peptide chain release factor 1 [Alteromonas sp. S89]
Length = 361
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 52/85 (61%), Gaps = 5/85 (5%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
+I++ D++ R SG GGQ V KT++ V LTHIPTGIV++C RS +NR A LL
Sbjct: 218 EINKADLRVDTYRASGAGGQHVNKTDSAVRLTHIPTGIVVECQDERSQHKNRAKAMALLQ 277
Query: 112 AQWDVQVNGEDSLNAQIRRIDEKRR 136
A+ + + ++S AQ I + RR
Sbjct: 278 AKLN---SAQESAAAQ--EISDARR 297
>gi|363890707|ref|ZP_09318023.1| peptide chain release factor 2 [Eubacteriaceae bacterium CM5]
gi|361964449|gb|EHL17484.1| peptide chain release factor 2 [Eubacteriaceae bacterium CM5]
Length = 344
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 41/61 (67%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
I+ KD++ R SG GGQ V KT + + +THIPTG+V++C RS N+ TA ++L+A
Sbjct: 211 INPKDLKIDTYRSSGAGGQHVNKTESAIRITHIPTGVVVQCQNERSQFSNKDTAMKMLMA 270
Query: 113 Q 113
+
Sbjct: 271 K 271
>gi|363893323|ref|ZP_09320460.1| peptide chain release factor 2 [Eubacteriaceae bacterium CM2]
gi|361961421|gb|EHL14622.1| peptide chain release factor 2 [Eubacteriaceae bacterium CM2]
Length = 344
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 41/61 (67%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
I+ KD++ R SG GGQ V KT + + +THIPTG+V++C RS N+ TA ++L+A
Sbjct: 211 INPKDLKIDTYRSSGAGGQHVNKTESAIRITHIPTGVVVQCQNERSQFSNKDTAMKMLMA 270
Query: 113 Q 113
+
Sbjct: 271 K 271
>gi|333367667|ref|ZP_08459914.1| peptide chain release factor RF1 [Psychrobacter sp. 1501(2011)]
gi|332978486|gb|EGK15198.1| peptide chain release factor RF1 [Psychrobacter sp. 1501(2011)]
Length = 362
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 40/61 (65%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
+++ DI+ R SG GGQ V T++ V LTHIPTG+V +C Q RS +NR A ++L+
Sbjct: 219 ELNPADIRMDTFRSSGAGGQHVNTTDSAVRLTHIPTGVVAECQQERSQHKNRAKAMQMLI 278
Query: 112 A 112
A
Sbjct: 279 A 279
>gi|226365870|ref|YP_002783653.1| peptide chain release factor 2 [Rhodococcus opacus B4]
gi|254790919|sp|C1B1L3.1|RF2_RHOOB RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|226244360|dbj|BAH54708.1| peptide chain release factor 2 [Rhodococcus opacus B4]
Length = 368
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 48/86 (55%), Gaps = 5/86 (5%)
Query: 33 NDGYHRNLVSNIDIYSTIPKIDEKDIQERFVR-----GSGPGGQAVAKTNNCVVLTHIPT 87
N G + + +++ + D D+ E VR SGPGGQ+V T++ V LTHIPT
Sbjct: 206 NQGRRQTSFAEVEVLPVVETTDHIDVNENDVRVDVYRSSGPGGQSVNTTDSAVRLTHIPT 265
Query: 88 GIVIKCHQSRSLSENRKTARELLVAQ 113
GIV+ C +S +N+ +A +L A+
Sbjct: 266 GIVVTCQNEKSQLQNKVSAMRVLQAK 291
>gi|49531479|emb|CAG69191.1| peptide chain release factor 1 [Acinetobacter sp. ADP1]
Length = 376
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 60/92 (65%), Gaps = 2/92 (2%)
Query: 40 LVSNIDIYSTIPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSL 99
++ +D+ +T+ +I+ D++ R SG GGQ + KT++ V +TH+PTG+V++C + RS
Sbjct: 219 ILPEVDVDTTV-EINPADLRIDTYRASGAGGQHINKTDSAVRITHVPTGVVVECQEERSQ 277
Query: 100 SENRKTARELLVAQWD-VQVNGEDSLNAQIRR 130
+N+ A LLV++ + + +++ +++RR
Sbjct: 278 HKNKAKAMALLVSRLENAKRAAQETATSEMRR 309
>gi|384101336|ref|ZP_10002375.1| peptide chain release factor 2 [Rhodococcus imtechensis RKJ300]
gi|419964746|ref|ZP_14480699.1| peptide chain release factor 2 [Rhodococcus opacus M213]
gi|383840890|gb|EID80185.1| peptide chain release factor 2 [Rhodococcus imtechensis RKJ300]
gi|414569858|gb|EKT80598.1| peptide chain release factor 2 [Rhodococcus opacus M213]
Length = 368
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 48/86 (55%), Gaps = 5/86 (5%)
Query: 33 NDGYHRNLVSNIDIYSTIPKIDEKDIQERFVR-----GSGPGGQAVAKTNNCVVLTHIPT 87
N G + + +++ + D D+ E VR SGPGGQ+V T++ V LTHIPT
Sbjct: 206 NQGRRQTSFAEVEVLPVVETTDHIDVNENDVRVDVYRSSGPGGQSVNTTDSAVRLTHIPT 265
Query: 88 GIVIKCHQSRSLSENRKTARELLVAQ 113
GIV+ C +S +N+ +A +L A+
Sbjct: 266 GIVVTCQNEKSQLQNKVSAMRVLQAK 291
>gi|238060791|ref|ZP_04605500.1| peptide chain release factor 1 [Micromonospora sp. ATCC 39149]
gi|237882602|gb|EEP71430.1| peptide chain release factor 1 [Micromonospora sp. ATCC 39149]
Length = 362
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 49/91 (53%), Gaps = 6/91 (6%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
+D D++ R SGPGGQ+V T++ V +TH+PTGIV+ C +S +NR+ A +L
Sbjct: 216 SVDPNDLRIDVFRSSGPGGQSVNTTDSAVRITHVPTGIVVSCQNEKSQLQNREQAMRILR 275
Query: 112 AQW------DVQVNGEDSLNAQIRRIDEKRR 136
A+ D+ AQ+R +D R
Sbjct: 276 ARLLAAAQEQADAAASDARKAQVRTVDRSER 306
>gi|363894512|ref|ZP_09321593.1| peptide chain release factor 2 [Eubacteriaceae bacterium ACC19a]
gi|361962263|gb|EHL15409.1| peptide chain release factor 2 [Eubacteriaceae bacterium ACC19a]
Length = 344
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 41/61 (67%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
I+ KD++ R SG GGQ V KT + + +THIPTG+V++C RS N+ TA ++L+A
Sbjct: 211 INPKDLKIDTYRSSGAGGQHVNKTESAIRITHIPTGVVVQCQNERSQFSNKDTAMKMLMA 270
Query: 113 Q 113
+
Sbjct: 271 K 271
>gi|225022790|ref|ZP_03711982.1| hypothetical protein CORMATOL_02835 [Corynebacterium matruchotii
ATCC 33806]
gi|305682007|ref|ZP_07404811.1| peptide chain release factor 1 [Corynebacterium matruchotii ATCC
14266]
gi|224944397|gb|EEG25606.1| hypothetical protein CORMATOL_02835 [Corynebacterium matruchotii
ATCC 33806]
gi|305658480|gb|EFM47983.1| peptide chain release factor 1 [Corynebacterium matruchotii ATCC
14266]
Length = 360
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 41/61 (67%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
+ID+KDI+ R SG GGQ V T++ V +TH+PTGIV+ C + RS +N+ A ++L
Sbjct: 220 EIDDKDIRVDVYRSSGKGGQGVNTTDSAVRITHLPTGIVVTCQKERSQIQNKARALQVLA 279
Query: 112 A 112
A
Sbjct: 280 A 280
>gi|422574352|ref|ZP_16649906.1| peptide chain release factor 1 [Propionibacterium acnes HL044PA1]
gi|314927458|gb|EFS91289.1| peptide chain release factor 1 [Propionibacterium acnes HL044PA1]
Length = 388
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 40/69 (57%)
Query: 45 DIYSTIPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRK 104
D+ T ID DI+ R SGPGGQ V T++ V LTH+PTGIV C RS +N+
Sbjct: 235 DVDETEVDIDPADIRVDVYRSSGPGGQGVNTTDSAVRLTHLPTGIVASCQNERSQLQNKA 294
Query: 105 TARELLVAQ 113
A +L A+
Sbjct: 295 EAMRMLRAK 303
>gi|307198741|gb|EFN79544.1| Peptide chain release factor 1-like, mitochondrial [Harpegnathos
saltator]
Length = 362
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTA-RELLV 111
I+E+D++ R SG GGQ V KTN+ V +THIPTG++++C RS N+K A L
Sbjct: 211 INERDLKIETKRASGSGGQHVNKTNSAVRITHIPTGLIVECQVHRSQIRNKKLAMMRLRN 270
Query: 112 AQWDVQVNGEDSLNAQIRR 130
++ Q+N + S +++R+
Sbjct: 271 MMYEQQLNKQTSFRSELRK 289
>gi|213965439|ref|ZP_03393634.1| peptide chain release factor 2 [Corynebacterium amycolatum SK46]
gi|213951823|gb|EEB63210.1| peptide chain release factor 2 [Corynebacterium amycolatum SK46]
Length = 370
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 40/61 (65%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
I E D++ R SGPGGQ+V T++ V LTH+PTGIV+ C +S +N+ +A +L A
Sbjct: 232 IPESDLRIDVYRSSGPGGQSVNTTDSAVRLTHVPTGIVVTCQNEKSQHQNKASAMRVLQA 291
Query: 113 Q 113
+
Sbjct: 292 K 292
>gi|441213586|ref|ZP_20975832.1| peptide chain release factor 1 [Mycobacterium smegmatis MKD8]
gi|440625550|gb|ELQ87396.1| peptide chain release factor 1 [Mycobacterium smegmatis MKD8]
Length = 359
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 51/91 (56%), Gaps = 6/91 (6%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
+IDE D++ R SG GGQ V T++ V +TH+PTGIV+ C RS +N+ A ++L
Sbjct: 219 QIDESDLRIDVYRSSGKGGQGVNTTDSAVRITHLPTGIVVTCQNERSQLQNKARAMQVLA 278
Query: 112 AQWDV----QVNGEDSLN--AQIRRIDEKRR 136
A+ Q + S + +QIR +D R
Sbjct: 279 ARLQALAEEQAEADASADRASQIRTVDRSER 309
>gi|424874825|ref|ZP_18298487.1| peptide chain release factor 2 [Rhizobium leguminosarum bv. viciae
WSM1455]
gi|393170526|gb|EJC70573.1| peptide chain release factor 2 [Rhizobium leguminosarum bv. viciae
WSM1455]
Length = 376
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 56/102 (54%), Gaps = 10/102 (9%)
Query: 21 LESQVTITRELRNDGYHRNL-----VSNIDIYSTIP-----KIDEKDIQERFVRGSGPGG 70
L+++ + R +R Y N S+I +Y + +I+E D + R SG GG
Sbjct: 190 LKTESGVHRLVRISPYDSNARRHTSFSSIWVYPVVDDSIQIEINESDCRIDTYRSSGAGG 249
Query: 71 QAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
Q V T++ V +THIPTGIV++C Q RS +NR A ++L A
Sbjct: 250 QHVNTTDSAVRITHIPTGIVVQCQQERSQHKNRAKAWDMLRA 291
>gi|424851867|ref|ZP_18276264.1| peptide chain release factor 2 [Rhodococcus opacus PD630]
gi|356666532|gb|EHI46603.1| peptide chain release factor 2 [Rhodococcus opacus PD630]
Length = 371
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 48/86 (55%), Gaps = 5/86 (5%)
Query: 33 NDGYHRNLVSNIDIYSTIPKIDEKDIQERFVR-----GSGPGGQAVAKTNNCVVLTHIPT 87
N G + + +++ + D D+ E VR SGPGGQ+V T++ V LTHIPT
Sbjct: 209 NQGRRQTSFAEVEVLPVVETTDHIDVNENDVRVDVYRSSGPGGQSVNTTDSAVRLTHIPT 268
Query: 88 GIVIKCHQSRSLSENRKTARELLVAQ 113
GIV+ C +S +N+ +A +L A+
Sbjct: 269 GIVVTCQNEKSQLQNKVSAMRVLQAK 294
>gi|417931626|ref|ZP_12574991.1| peptide chain release factor 1 [Propionibacterium acnes
SK182B-JCVI]
gi|340775569|gb|EGR97622.1| peptide chain release factor 1 [Propionibacterium acnes
SK182B-JCVI]
Length = 361
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 40/69 (57%)
Query: 45 DIYSTIPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRK 104
D+ T ID D++ R SGPGGQ V T++ V LTH+PTGIV C RS +N+
Sbjct: 208 DVDETEVDIDPADVRVDVYRSSGPGGQGVNTTDSAVRLTHLPTGIVASCQNERSQLQNKA 267
Query: 105 TARELLVAQ 113
A +L A+
Sbjct: 268 EAMRMLRAK 276
>gi|424881103|ref|ZP_18304735.1| peptide chain release factor 2 [Rhizobium leguminosarum bv.
trifolii WU95]
gi|392517466|gb|EIW42198.1| peptide chain release factor 2 [Rhizobium leguminosarum bv.
trifolii WU95]
Length = 376
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 56/102 (54%), Gaps = 10/102 (9%)
Query: 21 LESQVTITRELRNDGYHRNL-----VSNIDIYSTIP-----KIDEKDIQERFVRGSGPGG 70
L+++ + R +R Y N S+I +Y + +I+E D + R SG GG
Sbjct: 190 LKTESGVHRLVRISPYDSNARRHTSFSSIWVYPVVDDSIQIEINESDCRIDTYRSSGAGG 249
Query: 71 QAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
Q V T++ V +THIPTGIV++C Q RS +NR A ++L A
Sbjct: 250 QHVNTTDSAVRITHIPTGIVVQCQQERSQHKNRAKAWDMLRA 291
>gi|386392849|ref|ZP_10077630.1| peptide chain release factor 2 [Desulfovibrio sp. U5L]
gi|385733727|gb|EIG53925.1| peptide chain release factor 2 [Desulfovibrio sp. U5L]
Length = 366
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 64/110 (58%), Gaps = 11/110 (10%)
Query: 20 LLESQVTITRELR-----NDGYHRNLVSNIDIYSTIP-----KIDEKDIQERFVRGSGPG 69
LL+++ I R +R + G +++D+Y + E+D++ R SGPG
Sbjct: 190 LLDAEKGIHRLIRISPFDSSGRRHTSFASVDVYPDAGLDIDIDVKEEDLRVDVFRASGPG 249
Query: 70 GQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVAQ-WDVQV 118
GQ V KT++ + +TH+PT IV++C +S NR++A ++L A+ +D+++
Sbjct: 250 GQHVNKTSSAIRITHLPTNIVVQCQNEKSQHRNRESAMKVLKARLYDLEL 299
>gi|241204131|ref|YP_002975227.1| peptide chain release factor 2 [Rhizobium leguminosarum bv.
trifolii WSM1325]
gi|240858021|gb|ACS55688.1| conserved hypothetical protein [Rhizobium leguminosarum bv.
trifolii WSM1325]
Length = 376
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 56/102 (54%), Gaps = 10/102 (9%)
Query: 21 LESQVTITRELRNDGYHRNL-----VSNIDIYSTIP-----KIDEKDIQERFVRGSGPGG 70
L+++ + R +R Y N S+I +Y + +I+E D + R SG GG
Sbjct: 190 LKTESGVHRLVRISPYDSNARRHTSFSSIWVYPVVDDSIQIEINESDCRIDTYRSSGAGG 249
Query: 71 QAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
Q V T++ V +THIPTGIV++C Q RS +NR A ++L A
Sbjct: 250 QHVNTTDSAVRITHIPTGIVVQCQQERSQHKNRAKAWDMLRA 291
>gi|365840058|ref|ZP_09381272.1| peptide chain release factor 2 [Anaeroglobus geminatus F0357]
gi|364562797|gb|EHM40629.1| peptide chain release factor 2 [Anaeroglobus geminatus F0357]
Length = 342
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 63/121 (52%), Gaps = 12/121 (9%)
Query: 3 IKIVMWPMRDRNLAGIRLLESQVTITRELRNDGYHRNL-----VSNIDIYSTIP-----K 52
IK + + N G L+S+ + R +R + N + +D+ +P +
Sbjct: 142 IKSCAFTVEGENAYG--YLKSEKGVHRLVRISPFDANARRHTSFTAVDVMPELPDDVEVE 199
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
I+ D++ + R SG GGQ V KT++ V +THIPTGIV++C RS +NR+ + L A
Sbjct: 200 INMDDVRVDYFRASGAGGQHVNKTSSAVRMTHIPTGIVVQCQNERSQVQNREMCMKYLRA 259
Query: 113 Q 113
+
Sbjct: 260 K 260
>gi|296122601|ref|YP_003630379.1| hypothetical protein Plim_2354 [Planctomyces limnophilus DSM 3776]
gi|296014941|gb|ADG68180.1| hypothetical protein Plim_2354 [Planctomyces limnophilus DSM 3776]
Length = 372
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 44/71 (61%), Gaps = 4/71 (5%)
Query: 43 NIDIYSTIPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSEN 102
+IDI PKI I+E R SG GGQ V KT++ + LTH+PT V++C RS +N
Sbjct: 229 DIDINWEDPKI----IREDIFRASGAGGQHVNKTSSAIRLTHLPTNTVVQCQNERSQHKN 284
Query: 103 RKTARELLVAQ 113
R R++LVA+
Sbjct: 285 RSWCRKMLVAK 295
>gi|329904245|ref|ZP_08273720.1| Peptide chain release factor 1 [Oxalobacteraceae bacterium
IMCC9480]
gi|327548069|gb|EGF32798.1| Peptide chain release factor 1 [Oxalobacteraceae bacterium
IMCC9480]
Length = 360
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 54/92 (58%), Gaps = 9/92 (9%)
Query: 48 STIPKIDE--------KDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSL 99
+ +P++DE D++ R SG GGQ + KT++ V +TH+PTGIV++C RS
Sbjct: 204 AVMPEVDEISDVDINPSDLRIDTYRASGAGGQHINKTDSAVRITHLPTGIVVECQDDRSQ 263
Query: 100 SENRKTARELLVAQW-DVQVNGEDSLNAQIRR 130
+N+ +A ++L A+ D QV + S A R+
Sbjct: 264 HKNKASALKVLAARIKDAQVREQQSKEAATRK 295
>gi|152980137|ref|YP_001351903.1| peptide chain release factor 1 [Janthinobacterium sp. Marseille]
gi|166223564|sp|A6SUF6.1|RF1_JANMA RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|151280214|gb|ABR88624.1| RF-1 peptide chain release factor [Janthinobacterium sp. Marseille]
Length = 360
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
I+ D++ R SG GGQ + KT++ V +THIPTGIV++C RS +N+ +A ++L A
Sbjct: 217 INPADLRIDTYRASGAGGQHINKTDSAVRITHIPTGIVVECQDDRSQHKNKASALKVLAA 276
Query: 113 QW-DVQVNGEDSLNAQIRR 130
+ DVQ+ + S A R+
Sbjct: 277 RIKDVQLREQQSKEAATRK 295
>gi|403253475|ref|ZP_10919776.1| peptide chain release factor 2 [Thermotoga sp. EMP]
gi|402811009|gb|EJX25497.1| peptide chain release factor 2 [Thermotoga sp. EMP]
Length = 367
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 46/74 (62%), Gaps = 8/74 (10%)
Query: 48 STIPKIDE--------KDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSL 99
+ IP+ID+ +D++ R SG GGQ V KT + V +TH+PTGIV+ C RS
Sbjct: 218 NVIPEIDDDVDIEIKPEDLKIETFRASGHGGQYVNKTESAVRITHLPTGIVVSCQNERSQ 277
Query: 100 SENRKTARELLVAQ 113
+N++TA ++L A+
Sbjct: 278 HQNKQTALKILKAK 291
>gi|456864581|gb|EMF82980.1| putative peptide chain release factor 2 [Leptospira weilii serovar
Topaz str. LT2116]
Length = 215
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 41/61 (67%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
KI+EKDI+ R SG GGQ V T++ V +TH+P+G+V+ C RS +NR TA ++L
Sbjct: 83 KIEEKDIRVDVYRSSGAGGQHVNTTDSAVRITHLPSGVVVACQNERSQIKNRDTAFKMLK 142
Query: 112 A 112
A
Sbjct: 143 A 143
>gi|350560643|ref|ZP_08929483.1| peptide chain release factor 1 [Thioalkalivibrio thiocyanoxidans
ARh 4]
gi|349782911|gb|EGZ37194.1| peptide chain release factor 1 [Thioalkalivibrio thiocyanoxidans
ARh 4]
Length = 361
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 42/63 (66%)
Query: 50 IPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTAREL 109
+P+I+ D++ R SG GGQ V +T++ V LTH+PTG+V++C RS +N+ A +L
Sbjct: 216 MPEINPADLRVDTYRASGAGGQHVNRTDSAVRLTHLPTGLVVECQDERSQHKNKARAMKL 275
Query: 110 LVA 112
L A
Sbjct: 276 LAA 278
>gi|336325979|ref|YP_004605945.1| peptide chain release factor RF-1 [Corynebacterium resistens DSM
45100]
gi|336101961|gb|AEI09781.1| peptide chain release factor RF-1 [Corynebacterium resistens DSM
45100]
Length = 359
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 41/61 (67%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
+IDEKD++ R SG GGQ V T++ V +TH+PTG+V+ C + RS +N+ A ++L
Sbjct: 217 QIDEKDLRIDVYRSSGKGGQGVNTTDSAVRITHLPTGVVVTCQKERSQIQNKARAMQVLA 276
Query: 112 A 112
A
Sbjct: 277 A 277
>gi|99035041|ref|ZP_01314835.1| hypothetical protein Wendoof_01000330 [Wolbachia endosymbiont of
Drosophila willistoni TSC#14030-0811.24]
Length = 336
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 38/58 (65%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELL 110
+DEKD++ R SG GGQ V KT + V +THIPTG+V++C RS N+ A +LL
Sbjct: 204 VDEKDLKIDTYRASGAGGQHVNKTESAVRITHIPTGVVVQCQNGRSQHRNKDEALKLL 261
>gi|58696790|ref|ZP_00372322.1| peptide chain release factor 2 [Wolbachia endosymbiont of
Drosophila simulans]
gi|58698424|ref|ZP_00373334.1| peptide chain release factor 2 [Wolbachia endosymbiont of
Drosophila ananassae]
gi|58698511|ref|ZP_00373415.1| peptide chain release factor 2 [Wolbachia endosymbiont of
Drosophila ananassae]
gi|225630212|ref|YP_002727003.1| Protein chain release factor B [Wolbachia sp. wRi]
gi|58534979|gb|EAL59074.1| peptide chain release factor 2 [Wolbachia endosymbiont of
Drosophila ananassae]
gi|58535047|gb|EAL59136.1| peptide chain release factor 2 [Wolbachia endosymbiont of
Drosophila ananassae]
gi|58537012|gb|EAL60158.1| peptide chain release factor 2 [Wolbachia endosymbiont of
Drosophila simulans]
gi|225592193|gb|ACN95212.1| Protein chain release factor B [Wolbachia sp. wRi]
Length = 336
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 38/58 (65%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELL 110
+DEKD++ R SG GGQ V KT + V +THIPTG+V++C RS N+ A +LL
Sbjct: 204 VDEKDLKIDTYRASGAGGQHVNKTESAVRITHIPTGVVVQCQNGRSQHRNKDEALKLL 261
>gi|304317582|ref|YP_003852727.1| hypothetical protein Tthe_2166 [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|302779084|gb|ADL69643.1| hypothetical protein Tthe_2166 [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
Length = 365
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 49/80 (61%), Gaps = 8/80 (10%)
Query: 42 SNIDIYSTIPKIDE--------KDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKC 93
++ + +P+ID+ +D++ R SG GGQ V KT + + +THIPTGI+++C
Sbjct: 213 TSFALVEVLPEIDDDIKVDIRPEDLKIDTYRSSGAGGQHVNKTESAIRITHIPTGIIVQC 272
Query: 94 HQSRSLSENRKTARELLVAQ 113
RS +NR+TA ++L A+
Sbjct: 273 QSERSQMQNRETAMKMLKAK 292
>gi|210608516|ref|ZP_03287892.1| hypothetical protein CLONEX_00071 [Clostridium nexile DSM 1787]
gi|210153007|gb|EEA84013.1| hypothetical protein CLONEX_00071 [Clostridium nexile DSM 1787]
Length = 358
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
IDEKDI+ +R SG GGQ V T++ V LTH PTGIVI +S +N++ A LL +
Sbjct: 217 IDEKDIRIDVMRASGNGGQCVNTTDSAVRLTHYPTGIVIYSQTEKSQLQNKEKAFRLLRS 276
Query: 113 Q-WDVQVNGEDSLNAQIRR 130
+ +++++ + S A+ RR
Sbjct: 277 KLYELELEKQQSAEAEARR 295
>gi|144897745|emb|CAM74609.1| peptide chain release factor RF-1 [Magnetospirillum gryphiswaldense
MSR-1]
Length = 352
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 41/61 (67%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
+ID+KD++ R G GGQ+V T++ V +THIPTG+ + C Q +S +N+ TA +LL
Sbjct: 209 QIDDKDLRFDVYRSQGSGGQSVNTTDSAVRVTHIPTGLAVACQQEKSQHKNKATAMKLLR 268
Query: 112 A 112
A
Sbjct: 269 A 269
>gi|118469567|ref|YP_889202.1| peptide chain release factor 1 [Mycobacterium smegmatis str. MC2
155]
gi|399989212|ref|YP_006569562.1| peptide chain release factor 1 [Mycobacterium smegmatis str. MC2
155]
gi|118170854|gb|ABK71750.1| peptide chain release factor 1 [Mycobacterium smegmatis str. MC2
155]
gi|399233774|gb|AFP41267.1| Peptide chain release factor 1 [Mycobacterium smegmatis str. MC2
155]
Length = 359
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 51/91 (56%), Gaps = 6/91 (6%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
+IDE D++ R SG GGQ V T++ V +TH+PTGIV+ C RS +N+ A ++L
Sbjct: 219 QIDESDLRIDVYRSSGKGGQGVNTTDSAVRITHLPTGIVVTCQNERSQLQNKARAMQVLA 278
Query: 112 AQWDV----QVNGEDSLN--AQIRRIDEKRR 136
A+ Q + S + +QIR +D R
Sbjct: 279 ARLQALAEEQAEADASADRASQIRTVDRSER 309
>gi|354481893|ref|XP_003503135.1| PREDICTED: peptide chain release factor 1, mitochondrial
[Cricetulus griseus]
gi|344253032|gb|EGW09136.1| Peptide chain release factor 1, mitochondrial [Cricetulus griseus]
Length = 443
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 55/105 (52%), Gaps = 14/105 (13%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
K+D +D++ R GPGGQ V T++ V L HIPTG+V++C Q RS +N++ A +L
Sbjct: 292 KVDPRDLRIDTFRSRGPGGQHVNTTDSAVRLVHIPTGLVVECQQERSQLKNKEIALRVLR 351
Query: 112 AQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKLDALKKAWKER 156
A+ Q+ +D Q+Q RKL +A ER
Sbjct: 352 ARLYQQILEKDK--------------CQQQSARKLQVGTRAQSER 382
>gi|227502940|ref|ZP_03932989.1| peptide chain release factor 2 [Corynebacterium accolens ATCC
49725]
gi|227076362|gb|EEI14325.1| peptide chain release factor 2 [Corynebacterium accolens ATCC
49725]
Length = 367
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 49/86 (56%), Gaps = 5/86 (5%)
Query: 33 NDGYHRNLVSNIDIYSTIPKIDEKDIQERFVR-----GSGPGGQAVAKTNNCVVLTHIPT 87
N G + + +++ + + D D+ + VR SGPGGQ+V T++ V LTHIPT
Sbjct: 204 NQGRRQTSFAEVEVLPVVEQTDHIDVPDNEVRVDVYRSSGPGGQSVNTTDSAVRLTHIPT 263
Query: 88 GIVIKCHQSRSLSENRKTARELLVAQ 113
GIV+ C +S +N+ +A +L A+
Sbjct: 264 GIVVTCQNEKSQIQNKASAMRVLQAK 289
>gi|451943524|ref|YP_007464160.1| peptide chain release factor 2 [Corynebacterium halotolerans YIM
70093 = DSM 44683]
gi|451902911|gb|AGF71798.1| peptide chain release factor 2 [Corynebacterium halotolerans YIM
70093 = DSM 44683]
Length = 369
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 49/86 (56%), Gaps = 5/86 (5%)
Query: 33 NDGYHRNLVSNIDIYSTIPKIDEKDIQERFVR-----GSGPGGQAVAKTNNCVVLTHIPT 87
N G + + +++ + + D D+ + VR SGPGGQ+V T++ V LTHIPT
Sbjct: 205 NQGRRQTSFAEVEVLPVVEQTDHIDVPDNDVRVDVYRSSGPGGQSVNTTDSAVRLTHIPT 264
Query: 88 GIVIKCHQSRSLSENRKTARELLVAQ 113
GIV+ C +S +N+ +A +L A+
Sbjct: 265 GIVVTCQNEKSQIQNKASAMRVLQAK 290
>gi|3328106|gb|AAD12759.1| translational release factor 1 [Homo sapiens]
Length = 445
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 58/105 (55%), Gaps = 14/105 (13%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
K+D KD++ R G GGQ V KT++ V L HIPTG+V++C Q RS +N++ A +L
Sbjct: 294 KLDPKDLRIDTFRAKGAGGQHVNKTDSAVRLVHIPTGLVVECQQERSQIKNKEIAFRVLR 353
Query: 112 AQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKLDALKKAWKER 156
A+ Q+ I++ +R Q+Q RKL +A ER
Sbjct: 354 ARLYQQI------------IEKDKR--QQQSARKLQVGTRAQSER 384
>gi|27262208|gb|AAN87385.1| bacterial peptide chain release factor 2 [Heliobacillus mobilis]
gi|111074980|gb|ABH04839.1| bacterial peptide chain release factor 2 [Heliobacillus mobilis]
Length = 341
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 44/71 (61%), Gaps = 5/71 (7%)
Query: 43 NIDIYSTIPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSEN 102
+IDI +I+ +D++ R SG GGQ V KT + V +THIPTGIV+ C RS +N
Sbjct: 203 DIDI-----QINSEDLKVDTFRASGAGGQHVNKTESAVRITHIPTGIVVACQSERSQIQN 257
Query: 103 RKTARELLVAQ 113
R TA +L A+
Sbjct: 258 RATAMRMLQAK 268
>gi|349701070|ref|ZP_08902699.1| peptide chain release factor 2 [Gluconacetobacter europaeus LMG
18494]
Length = 333
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 38/61 (62%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
+I+E D++ R SG GGQ V KT + + +THIPTGIV+ C RS NR TA +L
Sbjct: 188 EINEADLRVDTFRASGAGGQHVNKTESAIRITHIPTGIVVACQTDRSQHRNRATAMTMLK 247
Query: 112 A 112
A
Sbjct: 248 A 248
>gi|170289031|ref|YP_001739269.1| peptide chain release factor 2 [Thermotoga sp. RQ2]
gi|281412649|ref|YP_003346728.1| peptide chain release factor 2 [Thermotoga naphthophila RKU-10]
gi|418045638|ref|ZP_12683733.1| peptide chain release factor 2 [Thermotoga maritima MSB8]
gi|238688848|sp|B1LB88.1|RF2_THESQ RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|170176534|gb|ACB09586.1| peptide chain release factor 2 [Thermotoga sp. RQ2]
gi|281373752|gb|ADA67314.1| peptide chain release factor 2 [Thermotoga naphthophila RKU-10]
gi|351676523|gb|EHA59676.1| peptide chain release factor 2 [Thermotoga maritima MSB8]
Length = 367
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 46/74 (62%), Gaps = 8/74 (10%)
Query: 48 STIPKIDE--------KDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSL 99
+ IP+ID+ +D++ R SG GGQ V KT + V +TH+PTGIV+ C RS
Sbjct: 218 NVIPEIDDDVDIEIRPEDLKIETFRASGHGGQYVNKTESAVRITHLPTGIVVSCQNERSQ 277
Query: 100 SENRKTARELLVAQ 113
+N++TA ++L A+
Sbjct: 278 HQNKQTALKILKAK 291
>gi|34496516|ref|NP_900731.1| peptide chain release factor 2 [Chromobacterium violaceum ATCC
12472]
gi|34102370|gb|AAQ58736.1| peptide chain release factor RF-2 [Chromobacterium violaceum ATCC
12472]
Length = 299
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 58/107 (54%), Gaps = 16/107 (14%)
Query: 20 LLESQVTITRELRNDGYHRNL-----VSNIDIYSTIPKIDEK--------DIQERFVRGS 66
LL ++V + R +R + N S++ +Y P++D+ D++ R S
Sbjct: 125 LLRTEVGVHRLVRVSPFDSNARRHTSFSSVFVY---PEVDDSFEIDINPADVRTDTYRAS 181
Query: 67 GPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVAQ 113
G GGQ + KT++ V LTHIPTGIV++C RS NR A ++L A+
Sbjct: 182 GAGGQHINKTDSAVRLTHIPTGIVVQCQNDRSQHRNRDEAWQMLRAK 228
>gi|421586991|ref|ZP_16032456.1| peptide chain release factor 2 [Rhizobium sp. Pop5]
gi|403708662|gb|EJZ23281.1| peptide chain release factor 2 [Rhizobium sp. Pop5]
Length = 322
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 55/102 (53%), Gaps = 10/102 (9%)
Query: 21 LESQVTITRELRNDGYHRNL-----VSNIDIYSTIP-----KIDEKDIQERFVRGSGPGG 70
L+++ + R +R Y N S+I +Y + +I+E D + R SG GG
Sbjct: 136 LKTESGVHRLVRISPYDSNARRHTSFSSIWVYPVVDDSINIEINESDCRIDTYRSSGAGG 195
Query: 71 QAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
Q V T++ V +THIPTGIV+ C Q RS +NR A E+L A
Sbjct: 196 QHVNTTDSAVRITHIPTGIVVACQQERSQHKNRAKAWEMLRA 237
>gi|302879738|ref|YP_003848302.1| peptide chain release factor 1 [Gallionella capsiferriformans ES-2]
gi|302582527|gb|ADL56538.1| peptide chain release factor 1 [Gallionella capsiferriformans ES-2]
Length = 362
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 53/92 (57%), Gaps = 9/92 (9%)
Query: 48 STIPKIDE--------KDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSL 99
+ +P++DE D++ R SG GGQ + KT++ V +THIPTG+V++C RS
Sbjct: 204 AIMPEVDEVNDVVLNNADLRIDTFRASGAGGQHINKTDSAVRITHIPTGVVVECQDGRSQ 263
Query: 100 SENRKTARELLVAQW-DVQVNGEDSLNAQIRR 130
+N+ A +L A+ D QV +++ A R+
Sbjct: 264 HQNKAQAMRVLCARIKDAQVRAQNAETAATRK 295
>gi|148270343|ref|YP_001244803.1| peptide chain release factor 2 [Thermotoga petrophila RKU-1]
gi|166225119|sp|A5IM04.1|RF2_THEP1 RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|147735887|gb|ABQ47227.1| bacterial peptide chain release factor 2 (bRF-2) [Thermotoga
petrophila RKU-1]
Length = 367
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 46/74 (62%), Gaps = 8/74 (10%)
Query: 48 STIPKIDE--------KDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSL 99
+ IP+ID+ +D++ R SG GGQ V KT + V +TH+PTGIV+ C RS
Sbjct: 218 NVIPEIDDDVDIEIRPEDLKIETFRASGHGGQYVNKTESAVRITHLPTGIVVSCQNERSQ 277
Query: 100 SENRKTARELLVAQ 113
+N++TA ++L A+
Sbjct: 278 HQNKQTALKILKAK 291
>gi|15644327|ref|NP_229379.1| peptide chain release factor 2 [Thermotoga maritima MSB8]
gi|7388057|sp|Q9X1R5.1|RF2_THEMA RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|4982148|gb|AAD36646.1|AE001802_15 peptide chain release factor RF-2 [Thermotoga maritima MSB8]
Length = 369
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 46/74 (62%), Gaps = 8/74 (10%)
Query: 48 STIPKIDE--------KDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSL 99
+ IP+ID+ +D++ R SG GGQ V KT + V +TH+PTGIV+ C RS
Sbjct: 220 NVIPEIDDDVDIEIRPEDLKIETFRASGHGGQYVNKTESAVRITHLPTGIVVSCQNERSQ 279
Query: 100 SENRKTARELLVAQ 113
+N++TA ++L A+
Sbjct: 280 HQNKQTALKILKAK 293
>gi|404492859|ref|YP_006716965.1| peptide chain release factor 2 [Pelobacter carbinolicus DSM 2380]
gi|404397961|gb|ABA88496.2| peptide chain release factor 2 [Pelobacter carbinolicus DSM 2380]
Length = 364
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 56/102 (54%), Gaps = 10/102 (9%)
Query: 21 LESQVTITRELRNDGYHRNL-----VSNIDIYSTIPK-----IDEKDIQERFVRGSGPGG 70
L +++ I R +R + N ++ ++ +P I+EKD++ R SG GG
Sbjct: 190 LRAEIGIHRLVRISPFDSNARRHTSFCSVFVFPELPDDVEVDINEKDLKVDTYRSSGAGG 249
Query: 71 QAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
Q V KT++ + +TH+P+GIV+ C RS +NR TA + L A
Sbjct: 250 QHVNKTDSAIRITHVPSGIVVACQNERSQHKNRATAMKQLKA 291
>gi|383820469|ref|ZP_09975725.1| peptide chain release factor 2 [Mycobacterium phlei RIVM601174]
gi|383334859|gb|EID13292.1| peptide chain release factor 2 [Mycobacterium phlei RIVM601174]
Length = 368
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 40/61 (65%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
I E D++ R SGPGGQ+V T++ V LTHIPTGIV+ C +S +N+ +A +L A
Sbjct: 232 IPETDVRVDVYRSSGPGGQSVNTTDSAVRLTHIPTGIVVTCQNEKSQLQNKMSAMRVLQA 291
Query: 113 Q 113
+
Sbjct: 292 K 292
>gi|227832889|ref|YP_002834596.1| peptide chain release factor RF-1 [Corynebacterium aurimucosum ATCC
700975]
gi|262182622|ref|ZP_06042043.1| peptide chain release factor RF-1 [Corynebacterium aurimucosum ATCC
700975]
gi|254790875|sp|C3PFQ4.1|RF1_CORA7 RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|227453905|gb|ACP32658.1| peptide chain release factor RF-1 [Corynebacterium aurimucosum ATCC
700975]
Length = 358
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 42/63 (66%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
ID+KDI+ R SG GGQ V T++ V +TH+PTG+V+ C + RS +N+ A ++L A
Sbjct: 218 IDDKDIRVDVYRSSGKGGQGVNTTDSAVRITHLPTGLVVTCQKERSQIQNKARALQVLQA 277
Query: 113 QWD 115
+ D
Sbjct: 278 RLD 280
>gi|260904322|ref|ZP_05912644.1| peptide chain release factor 2 [Brevibacterium linens BL2]
Length = 372
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 54/105 (51%), Gaps = 16/105 (15%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
+IDE D++ R SGPGGQ+V T++ V +TH PTG+V+ +S +NR+ A +L
Sbjct: 231 EIDENDLRIDVYRSSGPGGQSVNTTDSAVRITHAPTGVVVSMQNEKSQIQNREAAMRVL- 289
Query: 112 AQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKLDALKKAWKER 156
Q R +D KR+ +KK +K +W ++
Sbjct: 290 ---------------QSRLLDLKRKEEAAEKKELAGDIKASWGDQ 319
>gi|359690548|ref|ZP_09260549.1| peptide chain release factor 2 [Leptospira licerasiae serovar
Varillal str. MMD0835]
gi|418750004|ref|ZP_13306291.1| peptide chain release factor 2 [Leptospira licerasiae str. MMD4847]
gi|418759704|ref|ZP_13315883.1| peptide chain release factor 2 [Leptospira licerasiae serovar
Varillal str. VAR 010]
gi|384113456|gb|EID99721.1| peptide chain release factor 2 [Leptospira licerasiae serovar
Varillal str. VAR 010]
gi|404274158|gb|EJZ41477.1| peptide chain release factor 2 [Leptospira licerasiae str. MMD4847]
Length = 367
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 41/61 (67%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
+I++KDI+ R SG GGQ V T++ V +THIP+GIV+ C RS +NR TA ++L
Sbjct: 235 QIEDKDIRVDVYRSSGAGGQHVNTTDSAVRITHIPSGIVVACQNERSQIKNRDTAFKMLK 294
Query: 112 A 112
A
Sbjct: 295 A 295
>gi|254445589|ref|ZP_05059065.1| peptide chain release factor 2 [Verrucomicrobiae bacterium DG1235]
gi|198259897|gb|EDY84205.1| peptide chain release factor 2 [Verrucomicrobiae bacterium DG1235]
Length = 368
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/57 (52%), Positives = 37/57 (64%)
Query: 56 KDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
KD++E R SG GGQ V KT++ V LTHIPTGIV C RS +NR A ++L A
Sbjct: 227 KDLREDTYRSSGKGGQHVNKTDSAVRLTHIPTGIVAACQSDRSQHKNRSAAMKMLKA 283
>gi|349687350|ref|ZP_08898492.1| peptide chain release factor 2 [Gluconacetobacter oboediens 174Bp2]
Length = 333
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 38/61 (62%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
+I+E D++ R SG GGQ V KT + + +THIPTGIV+ C RS NR TA +L
Sbjct: 188 EINEADLRVDTFRASGAGGQHVNKTESAIRITHIPTGIVVACQTDRSQHRNRATAMTMLK 247
Query: 112 A 112
A
Sbjct: 248 A 248
>gi|306835540|ref|ZP_07468554.1| peptide chain release factor RF2 [Corynebacterium accolens ATCC
49726]
gi|304568597|gb|EFM44148.1| peptide chain release factor RF2 [Corynebacterium accolens ATCC
49726]
Length = 370
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 49/86 (56%), Gaps = 5/86 (5%)
Query: 33 NDGYHRNLVSNIDIYSTIPKIDEKDIQERFVR-----GSGPGGQAVAKTNNCVVLTHIPT 87
N G + + +++ + + D D+ + VR SGPGGQ+V T++ V LTHIPT
Sbjct: 207 NQGRRQTSFAEVEVLPVVEQTDHIDVPDNEVRVDVYRSSGPGGQSVNTTDSAVRLTHIPT 266
Query: 88 GIVIKCHQSRSLSENRKTARELLVAQ 113
GIV+ C +S +N+ +A +L A+
Sbjct: 267 GIVVTCQNEKSQIQNKASAMRVLQAK 292
>gi|399019154|ref|ZP_10721303.1| peptide chain release factor 1 [Herbaspirillum sp. CF444]
gi|398098301|gb|EJL88588.1| peptide chain release factor 1 [Herbaspirillum sp. CF444]
Length = 356
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
I+ DI+ R SG GGQ + KT++ V +TH+PTGIV++C RS +N+ +A ++L A
Sbjct: 213 INPADIRIDTYRASGAGGQHINKTDSAVRITHMPTGIVVECQDDRSQHKNKASALKVLAA 272
Query: 113 QW-DVQVNGEDSLNAQIRR 130
+ DVQ+ + S A R+
Sbjct: 273 RIKDVQLREQQSKEAATRK 291
>gi|319951472|ref|ZP_08025281.1| peptide chain release factor 2 [Dietzia cinnamea P4]
gi|319434864|gb|EFV90175.1| peptide chain release factor 2 [Dietzia cinnamea P4]
Length = 368
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 49/86 (56%), Gaps = 5/86 (5%)
Query: 33 NDGYHRNLVSNIDIYSTIPKIDEKDIQERFVR-----GSGPGGQAVAKTNNCVVLTHIPT 87
N G + + +++ + +D ++ E VR SGPGGQ+V T++ V LTHIPT
Sbjct: 206 NQGRRQTSFAEVEVLPVVETVDSIEVPENEVRVDVYRSSGPGGQSVNTTDSAVRLTHIPT 265
Query: 88 GIVIKCHQSRSLSENRKTARELLVAQ 113
GIV+ C +S +N+ A ++L A+
Sbjct: 266 GIVVTCQNEKSQLQNKVAAMKVLQAK 291
>gi|333896506|ref|YP_004470380.1| hypothetical protein Thexy_0660 [Thermoanaerobacterium
xylanolyticum LX-11]
gi|333111771|gb|AEF16708.1| hypothetical protein Thexy_0660 [Thermoanaerobacterium
xylanolyticum LX-11]
Length = 365
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 49/80 (61%), Gaps = 8/80 (10%)
Query: 42 SNIDIYSTIPKIDE--------KDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKC 93
++ + +P+ID+ +D++ R SG GGQ V KT + + +THIPTGI+++C
Sbjct: 213 TSFALVEVLPEIDDDIKVDIRPEDLKIDTYRSSGAGGQHVNKTESAIRITHIPTGIIVQC 272
Query: 94 HQSRSLSENRKTARELLVAQ 113
RS +NR+TA ++L A+
Sbjct: 273 QTERSQMQNRETAMKMLKAK 292
>gi|433646380|ref|YP_007291382.1| bacterial peptide chain release factor 2 (bRF-2) [Mycobacterium
smegmatis JS623]
gi|433296157|gb|AGB21977.1| bacterial peptide chain release factor 2 (bRF-2) [Mycobacterium
smegmatis JS623]
Length = 368
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 40/61 (65%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
I E D++ R SGPGGQ+V T++ V LTHIPTGIV+ C +S +N+ +A +L A
Sbjct: 232 IPESDVRVDVYRSSGPGGQSVNTTDSAVRLTHIPTGIVVTCQNEKSQLQNKVSAMRVLQA 291
Query: 113 Q 113
+
Sbjct: 292 K 292
>gi|34577120|ref|NP_004285.2| peptide chain release factor 1, mitochondrial [Homo sapiens]
gi|114651371|ref|XP_509647.2| PREDICTED: peptide chain release factor 1, mitochondrial isoform 5
[Pan troglodytes]
gi|114651373|ref|XP_001150158.1| PREDICTED: peptide chain release factor 1, mitochondrial isoform 3
[Pan troglodytes]
gi|397470684|ref|XP_003806947.1| PREDICTED: peptide chain release factor 1, mitochondrial isoform 1
[Pan paniscus]
gi|62512140|sp|O75570.2|RF1M_HUMAN RecName: Full=Peptide chain release factor 1, mitochondrial;
Short=MRF-1; Short=MtRF-1; Flags: Precursor
gi|27503783|gb|AAH42196.1| Mitochondrial translational release factor 1 [Homo sapiens]
gi|119629053|gb|EAX08648.1| mitochondrial translational release factor 1, isoform CRA_a [Homo
sapiens]
gi|119629054|gb|EAX08649.1| mitochondrial translational release factor 1, isoform CRA_a [Homo
sapiens]
gi|119629056|gb|EAX08651.1| mitochondrial translational release factor 1, isoform CRA_a [Homo
sapiens]
gi|119629058|gb|EAX08653.1| mitochondrial translational release factor 1, isoform CRA_a [Homo
sapiens]
gi|410209562|gb|JAA02000.1| mitochondrial translational release factor 1 [Pan troglodytes]
gi|410249800|gb|JAA12867.1| mitochondrial translational release factor 1 [Pan troglodytes]
gi|410295502|gb|JAA26351.1| mitochondrial translational release factor 1 [Pan troglodytes]
gi|410333659|gb|JAA35776.1| mitochondrial translational release factor 1 [Pan troglodytes]
Length = 445
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 58/105 (55%), Gaps = 14/105 (13%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
K+D KD++ R G GGQ V KT++ V L HIPTG+V++C Q RS +N++ A +L
Sbjct: 294 KLDPKDLRIDTFRAKGAGGQHVNKTDSAVRLVHIPTGLVVECQQERSQIKNKEIAFRVLR 353
Query: 112 AQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKLDALKKAWKER 156
A+ Q+ I++ +R Q+Q RKL +A ER
Sbjct: 354 ARLYQQI------------IEKDKR--QQQSARKLQVGTRAQSER 384
>gi|193786181|dbj|BAG51464.1| unnamed protein product [Homo sapiens]
Length = 445
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 58/105 (55%), Gaps = 14/105 (13%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
K+D KD++ R G GGQ V KT++ V L HIPTG+V++C Q RS +N++ A +L
Sbjct: 294 KLDPKDLRIDTFRAKGAGGQHVNKTDSAVRLVHIPTGLVVECQQERSQIKNKEIAFRVLR 353
Query: 112 AQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKLDALKKAWKER 156
A+ Q+ I++ +R Q+Q RKL +A ER
Sbjct: 354 ARLYQQI------------IEKDKR--QQQSARKLQVGTRAQSER 384
>gi|350546865|ref|ZP_08916227.1| peptide chain release factor 1 [Mycoplasma iowae 695]
gi|349503606|gb|EGZ31187.1| peptide chain release factor 1 [Mycoplasma iowae 695]
Length = 324
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
I E D++ R SG GGQ V +T + V LTHIPTG+V+ C + +S ENR TA ++L +
Sbjct: 218 IKESDLRIDTYRASGAGGQHVNRTESAVRLTHIPTGVVVACQEGKSQIENRATAMKMLKS 277
Query: 113 Q-WDV 116
+ W++
Sbjct: 278 KLWEL 282
>gi|350569217|ref|ZP_08937613.1| peptide chain release factor RF1 [Propionibacterium avidum ATCC
25577]
gi|348660035|gb|EGY76745.1| peptide chain release factor RF1 [Propionibacterium avidum ATCC
25577]
Length = 372
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 40/69 (57%)
Query: 45 DIYSTIPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRK 104
D+ T ID D++ R SGPGGQ V T++ V LTH+PTGIV C RS +N+
Sbjct: 218 DVDETEVDIDPADVRVDVYRSSGPGGQGVNTTDSAVRLTHLPTGIVASCQNERSQLQNKA 277
Query: 105 TARELLVAQ 113
A +L A+
Sbjct: 278 EAMRMLRAK 286
>gi|347359929|ref|YP_388297.2| peptide chain release factor 2 [Desulfovibrio alaskensis G20]
gi|342906465|gb|ABB38602.2| Peptide chain release factor 2 [Desulfovibrio alaskensis G20]
Length = 369
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 52/91 (57%), Gaps = 9/91 (9%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
I + D++ R SGPGGQ+V T++ V +THIPTGI +C +S N++TA ++L A
Sbjct: 234 IKDSDLRIDIFRSSGPGGQSVNTTSSAVRVTHIPTGITAQCQNEKSQHHNKETAMQILRA 293
Query: 113 QWDVQVNGEDSLNAQIRRIDEKRRATQEQKK 143
+ A+IRR D +++A K+
Sbjct: 294 RL---------YEAEIRRRDAEKQADYASKE 315
>gi|218660225|ref|ZP_03516155.1| peptide chain release factor 2 [Rhizobium etli IE4771]
Length = 350
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 67/119 (56%), Gaps = 12/119 (10%)
Query: 21 LESQVTITRELRNDGYHRNL-----VSNIDIYSTIP-----KIDEKDIQERFVRGSGPGG 70
L+++ + R +R Y N S+I +Y + +I+E D + R SG GG
Sbjct: 156 LKTESGVHRLVRISPYDSNARRHTSFSSIWVYPVVDDSIQIEINESDCRIDTYRSSGAGG 215
Query: 71 QAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVAQ-WDVQVNG-EDSLNAQ 127
Q V T++ V +THIPTGIV++C Q RS +NR A ++L A+ ++ ++ ED+ NA+
Sbjct: 216 QHVNTTDSAVRITHIPTGIVVQCQQERSQHKNRAKAWDMLRARMYEAELKKREDAANAE 274
>gi|117927849|ref|YP_872400.1| peptide chain release factor 1 [Acidothermus cellulolyticus 11B]
gi|166223522|sp|A0LSK4.1|RF1_ACIC1 RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|117648312|gb|ABK52414.1| bacterial peptide chain release factor 1 (bRF-1) [Acidothermus
cellulolyticus 11B]
Length = 364
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 40/59 (67%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELL 110
+ID D++ R SGPGGQ+V T++ V +TH+PTGIV+ C +S +N++TA +L
Sbjct: 211 QIDPNDLRIDVFRSSGPGGQSVNTTDSAVRITHLPTGIVVSCQNEKSQLQNKETALRIL 269
>gi|392415431|ref|YP_006452036.1| bacterial peptide chain release factor 2 (bRF-2) [Mycobacterium
chubuense NBB4]
gi|390615207|gb|AFM16357.1| bacterial peptide chain release factor 2 (bRF-2) [Mycobacterium
chubuense NBB4]
Length = 372
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 40/61 (65%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
I E D++ R SGPGGQ+V T++ V LTHIPTGIV+ C +S +N+ +A +L A
Sbjct: 235 IPESDVRVDVYRSSGPGGQSVNTTDSAVRLTHIPTGIVVTCQNEKSQLQNKVSAMRVLQA 294
Query: 113 Q 113
+
Sbjct: 295 K 295
>gi|291459037|ref|ZP_06598427.1| peptide chain release factor 2 [Oribacterium sp. oral taxon 078
str. F0262]
gi|291418291|gb|EFE92010.1| peptide chain release factor 2 [Oribacterium sp. oral taxon 078
str. F0262]
Length = 378
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 40/61 (65%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
I E+DI+ R SG GGQ + KT++ V L HIPTG V+ C + RS +NR+ A ++L A
Sbjct: 234 IREEDIKMEVFRSSGAGGQHINKTSSAVRLIHIPTGFVVACQEERSQLQNRQKAMQMLKA 293
Query: 113 Q 113
+
Sbjct: 294 K 294
>gi|227486869|ref|ZP_03917185.1| peptide chain release factor 2 [Corynebacterium glucuronolyticum
ATCC 51867]
gi|227541969|ref|ZP_03972018.1| peptide chain release factor 2 [Corynebacterium glucuronolyticum
ATCC 51866]
gi|227092943|gb|EEI28255.1| peptide chain release factor 2 [Corynebacterium glucuronolyticum
ATCC 51867]
gi|227182412|gb|EEI63384.1| peptide chain release factor 2 [Corynebacterium glucuronolyticum
ATCC 51866]
Length = 366
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 44/75 (58%), Gaps = 5/75 (6%)
Query: 41 VSNIDIYSTIPKIDEKDIQERFVR-----GSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQ 95
+ +++ + K D DI + VR SGPGGQ+V T++ V +THIPTGIV+ C
Sbjct: 213 FAEVEVLPVVEKTDHIDIPDSDVRVDVYRSSGPGGQSVNTTDSAVRITHIPTGIVVTCQN 272
Query: 96 SRSLSENRKTARELL 110
+S +NR +A +L
Sbjct: 273 EKSQIQNRASAMAVL 287
>gi|119629057|gb|EAX08652.1| mitochondrial translational release factor 1, isoform CRA_c [Homo
sapiens]
Length = 487
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 58/105 (55%), Gaps = 14/105 (13%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
K+D KD++ R G GGQ V KT++ V L HIPTG+V++C Q RS +N++ A +L
Sbjct: 336 KLDPKDLRIDTFRAKGAGGQHVNKTDSAVRLVHIPTGLVVECQQERSQIKNKEIAFRVLR 395
Query: 112 AQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKLDALKKAWKER 156
A+ Q+ I++ +R Q+Q RKL +A ER
Sbjct: 396 ARLYQQI------------IEKDKR--QQQSARKLQVGTRAQSER 426
>gi|330991179|ref|ZP_08315132.1| Peptide chain release factor 2 [Gluconacetobacter sp. SXCC-1]
gi|329761765|gb|EGG78256.1| Peptide chain release factor 2 [Gluconacetobacter sp. SXCC-1]
Length = 333
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 38/61 (62%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
+I+E D++ R SG GGQ V KT + + +THIPTGIV+ C RS NR TA +L
Sbjct: 188 EINEADLRVDTFRASGAGGQHVNKTESAIRITHIPTGIVVACQTDRSQHRNRATAMTMLK 247
Query: 112 A 112
A
Sbjct: 248 A 248
>gi|359451794|ref|ZP_09241183.1| peptide chain release factor 1 [Pseudoalteromonas sp. BSi20480]
gi|358042420|dbj|GAA77432.1| peptide chain release factor 1 [Pseudoalteromonas sp. BSi20480]
Length = 361
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 56/108 (51%), Gaps = 18/108 (16%)
Query: 44 IDIYSTIPK-----IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRS 98
+ + + IP+ I+ DI+ R SG GGQ V KT++ + +TH+PTG+V++C RS
Sbjct: 205 VAVMAEIPEAEAIEINTADIKVDTFRASGAGGQHVNKTDSAIRITHLPTGVVVECQDERS 264
Query: 99 LSENRKTARELLVAQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKL 146
+NR A +L A+ + DEKR A + ++R L
Sbjct: 265 QHKNRAKAMSVLAARLQ-------------QAEDEKRHAAEASERRNL 299
>gi|331701218|ref|YP_004398177.1| peptide chain release factor 1 [Lactobacillus buchneri NRRL
B-30929]
gi|406026781|ref|YP_006725613.1| peptide chain release factor 1 [Lactobacillus buchneri CD034]
gi|329128561|gb|AEB73114.1| Peptide chain release factor 1 [Lactobacillus buchneri NRRL
B-30929]
gi|405125270|gb|AFS00031.1| bacterial peptide chain release factor 1 (bRF- 1) [Lactobacillus
buchneri CD034]
Length = 360
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 47/77 (61%), Gaps = 2/77 (2%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
ID KDI+ R SG GGQ + KT++ V +TH+PTGIV+ RS +NR+ A ++L A
Sbjct: 218 IDPKDIRVDVYRSSGAGGQHINKTSSAVRMTHLPTGIVVAMQDERSQQQNRQKAMKILKA 277
Query: 113 Q-WDVQVNGE-DSLNAQ 127
+ +D E D NA+
Sbjct: 278 RVYDYYAQQEQDQYNAE 294
>gi|327398507|ref|YP_004339376.1| peptide chain release factor 2 [Hippea maritima DSM 10411]
gi|327181136|gb|AEA33317.1| peptide chain release factor 2 [Hippea maritima DSM 10411]
Length = 359
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 40/61 (65%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
ID KD++ R SG GGQ V KT++ + +THIPTGIV+ C RS +N+ A ++L A
Sbjct: 226 IDPKDLKIDTFRASGAGGQHVNKTDSAIRITHIPTGIVVSCQNERSQHKNKAFALKILKA 285
Query: 113 Q 113
+
Sbjct: 286 K 286
>gi|427414371|ref|ZP_18904561.1| peptide chain release factor 2 [Veillonella ratti ACS-216-V-Col6b]
gi|425714747|gb|EKU77750.1| peptide chain release factor 2 [Veillonella ratti ACS-216-V-Col6b]
Length = 330
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 42/61 (68%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
+D KD++ R SG GGQ + KT++ + +THIPTG+V++C RS +NR+ A +LL A
Sbjct: 194 LDMKDVRVDTYRASGAGGQHINKTDSAIRMTHIPTGVVVQCQSERSQIQNREQALKLLRA 253
Query: 113 Q 113
+
Sbjct: 254 K 254
>gi|406830835|ref|ZP_11090429.1| hypothetical protein SpalD1_04332 [Schlesneria paludicola DSM
18645]
Length = 336
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 40/60 (66%)
Query: 54 DEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVAQ 113
D K I+E R SG GGQ V KT++ + LTH+PT V++C RS +NR AR+++VA+
Sbjct: 198 DPKVIREDICRASGAGGQKVNKTDSAIRLTHLPTNAVVQCQNERSQHQNRALARKMMVAK 257
>gi|392537156|ref|ZP_10284293.1| peptide chain release factor 1 [Pseudoalteromonas marina mano4]
Length = 361
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 56/108 (51%), Gaps = 18/108 (16%)
Query: 44 IDIYSTIPK-----IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRS 98
+ + + IP+ I+ DI+ R SG GGQ V KT++ + +TH+PTG+V++C RS
Sbjct: 205 VAVMAEIPEAEAIEINTADIKVDTFRASGAGGQHVNKTDSAIRITHLPTGVVVECQDERS 264
Query: 99 LSENRKTARELLVAQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKL 146
+NR A +L A+ + DEKR A + ++R L
Sbjct: 265 QHKNRAKAMSVLAARLQ-------------QAEDEKRHAAEASERRNL 299
>gi|347761175|ref|YP_004868736.1| translation peptide chain release factor 2 [Gluconacetobacter
xylinus NBRC 3288]
gi|347580145|dbj|BAK84366.1| translation peptide chain release factor 2 [Gluconacetobacter
xylinus NBRC 3288]
Length = 322
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 38/61 (62%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
+I+E D++ R SG GGQ V KT + + +THIPTGIV+ C RS NR TA +L
Sbjct: 177 EINEADLRVDTFRASGAGGQHVNKTESAIRITHIPTGIVVACQTDRSQHRNRATAMTMLK 236
Query: 112 A 112
A
Sbjct: 237 A 237
>gi|417105946|ref|ZP_11962003.1| peptide chain release factor 2 [Rhizobium etli CNPAF512]
gi|327190272|gb|EGE57372.1| peptide chain release factor 2 [Rhizobium etli CNPAF512]
Length = 342
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 67/119 (56%), Gaps = 12/119 (10%)
Query: 21 LESQVTITRELRNDGYHRNL-----VSNIDIYSTIP-----KIDEKDIQERFVRGSGPGG 70
L+++ + R +R Y N S+I +Y + +I+E D + R SG GG
Sbjct: 156 LKTESGVHRLVRISPYDSNARRHTSFSSIWVYPVVDDSIQIEINESDCRIDTYRSSGAGG 215
Query: 71 QAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVAQ-WDVQVNG-EDSLNAQ 127
Q V T++ V +THIPTGIV++C Q RS +NR A ++L A+ ++ ++ ED+ NA+
Sbjct: 216 QHVNTTDSAVRITHIPTGIVVQCQQERSQHKNRAKAWDMLRARMYEAELKKREDAANAE 274
>gi|386846030|ref|YP_006264043.1| Peptide chain release factor 2 [Actinoplanes sp. SE50/110]
gi|359833534|gb|AEV81975.1| Peptide chain release factor 2 [Actinoplanes sp. SE50/110]
Length = 381
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 47/85 (55%), Gaps = 5/85 (5%)
Query: 33 NDGYHRNLVSNIDIYSTIPKIDEKDIQER-----FVRGSGPGGQAVAKTNNCVVLTHIPT 87
N G + + +++ + + D DI + R SGPGGQ+V T++ V LTHIPT
Sbjct: 219 NQGRRQTSFAGVEVMPVVEQTDHIDIPDNELRTDVYRSSGPGGQSVNTTDSAVRLTHIPT 278
Query: 88 GIVIKCHQSRSLSENRKTARELLVA 112
GIV+ C +S +N+ +A +L A
Sbjct: 279 GIVVTCQNEKSQLQNKASALRVLQA 303
>gi|88607366|ref|YP_505078.1| peptide chain release factor 2, programmed frameshift, partial
[Anaplasma phagocytophilum HZ]
gi|88598429|gb|ABD43899.1| peptide chain release factor 2 [Anaplasma phagocytophilum HZ]
Length = 376
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 39/59 (66%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELL 110
KI EKD++ R SG GGQ V KT + V +THIP+G+V++C SRS +NR A LL
Sbjct: 234 KILEKDLRIDTYRASGAGGQHVNKTESAVRITHIPSGMVVQCQTSRSQHQNRAEAYSLL 292
>gi|298529663|ref|ZP_07017066.1| peptide chain release factor 1 [Desulfonatronospira thiodismutans
ASO3-1]
gi|298511099|gb|EFI35002.1| peptide chain release factor 1 [Desulfonatronospira thiodismutans
ASO3-1]
Length = 356
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 52/85 (61%), Gaps = 5/85 (5%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
I+ D++ R SGPGGQ+V T++ V +THIPTG+V+ C +S +NR A ++L +
Sbjct: 214 IEPNDLRVDVFRASGPGGQSVNTTDSAVRITHIPTGLVVSCQDEKSQHKNRAKALKVLRS 273
Query: 113 QWDVQVNGEDSLNAQIRRIDEKRRA 137
+ +Q+ E+ Q R D+ RRA
Sbjct: 274 RL-LQIMEEE----QKREYDDNRRA 293
>gi|119472532|ref|ZP_01614580.1| Peptide chain release factor 1 (RF-1) [Alteromonadales bacterium
TW-7]
gi|119444856|gb|EAW26156.1| Peptide chain release factor 1 (RF-1) [Alteromonadales bacterium
TW-7]
Length = 361
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 56/108 (51%), Gaps = 18/108 (16%)
Query: 44 IDIYSTIPK-----IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRS 98
+ + + IP+ I+ DI+ R SG GGQ V KT++ + +TH+PTG+V++C RS
Sbjct: 205 VAVMAEIPEAEAIEINTADIKVDTFRASGAGGQHVNKTDSAIRITHLPTGVVVECQDERS 264
Query: 99 LSENRKTARELLVAQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKL 146
+NR A +L A+ + DEKR A + ++R L
Sbjct: 265 QHKNRAKAMSVLAARLQ-------------QAEDEKRHAAEASERRNL 299
>gi|297568438|ref|YP_003689782.1| hypothetical protein DaAHT2_0457 [Desulfurivibrio alkaliphilus
AHT2]
gi|296924353|gb|ADH85163.1| conserved hypothetical protein [Desulfurivibrio alkaliphilus AHT2]
Length = 368
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 59/104 (56%), Gaps = 19/104 (18%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
+I++KD++ R SG GGQ V KT++ + +TH+P+GIV++C RS N+ TA ++L
Sbjct: 235 EINDKDLRIDTYRASGAGGQHVNKTSSAIRITHLPSGIVVQCQNERSQHRNKDTAMKMLK 294
Query: 112 AQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKLDALKK--AW 153
AQ + E+ RA ++++++ L KK AW
Sbjct: 295 AQ-----------------LYERERANRKEEQQHLHGDKKEIAW 321
>gi|311740614|ref|ZP_07714441.1| peptide chain release factor RF1 [Corynebacterium pseudogenitalium
ATCC 33035]
gi|311304134|gb|EFQ80210.1| peptide chain release factor RF1 [Corynebacterium pseudogenitalium
ATCC 33035]
Length = 362
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 42/63 (66%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
ID+KDI+ R SG GGQ V T++ V +TH+PTG+++ C + RS +N+ A ++L A
Sbjct: 222 IDDKDIRVDVYRSSGKGGQGVNTTDSAVRITHLPTGLIVTCQKERSQIQNKARALQVLQA 281
Query: 113 QWD 115
+ D
Sbjct: 282 RLD 284
>gi|182419781|ref|ZP_02951021.1| peptide chain release factor 2 [Clostridium butyricum 5521]
gi|237666525|ref|ZP_04526510.1| peptide chain release factor 2 [Clostridium butyricum E4 str. BoNT
E BL5262]
gi|182376329|gb|EDT73911.1| peptide chain release factor 2 [Clostridium butyricum 5521]
gi|237657724|gb|EEP55279.1| peptide chain release factor 2 [Clostridium butyricum E4 str. BoNT
E BL5262]
Length = 347
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 37/54 (68%)
Query: 57 DIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELL 110
D++ R SG GGQ + KT++ V +THIPTGIV++C RS NR+TA E+L
Sbjct: 219 DLKVDTYRSSGSGGQHINKTDSAVRITHIPTGIVVQCQNERSQFSNRETAMEML 272
>gi|443673635|ref|ZP_21138693.1| Peptide chain release factor 2 [Rhodococcus sp. AW25M09]
gi|443413822|emb|CCQ17031.1| Peptide chain release factor 2 [Rhodococcus sp. AW25M09]
Length = 370
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 41/62 (66%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
+I E D++ R SGPGGQ+V T++ V LTHIPTGIV+ C +S +N+ +A +L
Sbjct: 234 EIPEGDVRVDVYRSSGPGGQSVNTTDSAVRLTHIPTGIVVTCQNEKSQLQNKVSAMRVLQ 293
Query: 112 AQ 113
A+
Sbjct: 294 AK 295
>gi|254000219|ref|YP_003052282.1| peptide chain release factor 1 [Methylovorus glucosetrophus SIP3-4]
gi|253986898|gb|ACT51755.1| peptide chain release factor 1 [Methylovorus glucosetrophus SIP3-4]
Length = 360
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 51/92 (55%), Gaps = 9/92 (9%)
Query: 48 STIPKIDE--------KDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSL 99
+ +P++DE DI+ R SG GGQ + KT++ V +TH PTGIV++C RS
Sbjct: 204 AVLPEVDEVSDVTISPADIRIDTFRASGAGGQHINKTDSAVRITHFPTGIVVECQDGRSQ 263
Query: 100 SENRKTARELLVAQWDV-QVNGEDSLNAQIRR 130
N+ A ++L A+ QVN + S A RR
Sbjct: 264 HSNKAQAMQVLAARIKAKQVNEQQSKIASERR 295
>gi|239907246|ref|YP_002953987.1| peptide chain release factor 2 [Desulfovibrio magneticus RS-1]
gi|239797112|dbj|BAH76101.1| peptide chain release factor 2 [Desulfovibrio magneticus RS-1]
Length = 285
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 53/84 (63%), Gaps = 6/84 (7%)
Query: 41 VSNIDIYSTIP-----KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQ 95
+++D+Y ++ E D++ R SGPGGQ V KT++ + +TH+PT IV++C
Sbjct: 131 FASVDVYPDAGVDIDIEVKEDDLRVDVFRASGPGGQHVNKTSSAIRITHLPTNIVVQCQN 190
Query: 96 SRSLSENRKTARELLVAQ-WDVQV 118
+S NR+TA ++L A+ +D+++
Sbjct: 191 EKSQHRNRETAMKVLKARLYDLEL 214
>gi|120402908|ref|YP_952737.1| peptide chain release factor 2 [Mycobacterium vanbaalenii PYR-1]
gi|166225112|sp|A1T6D1.1|RF2_MYCVP RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|119955726|gb|ABM12731.1| bacterial peptide chain release factor 2 (bRF-2) [Mycobacterium
vanbaalenii PYR-1]
Length = 368
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 41/62 (66%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
+I E D++ R SGPGGQ+V T++ V LTHIPTGIV+ C +S +N+ +A +L
Sbjct: 231 EIPEGDVRVDVYRSSGPGGQSVNTTDSAVRLTHIPTGIVVTCQNEKSQLQNKVSAMRVLQ 290
Query: 112 AQ 113
A+
Sbjct: 291 AK 292
>gi|405381835|ref|ZP_11035658.1| peptide chain release factor 2 [Rhizobium sp. CF142]
gi|397321722|gb|EJJ26137.1| peptide chain release factor 2 [Rhizobium sp. CF142]
Length = 342
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 67/119 (56%), Gaps = 12/119 (10%)
Query: 21 LESQVTITRELRNDGYHRNL-----VSNIDIYSTIP-----KIDEKDIQERFVRGSGPGG 70
L+++ + R +R Y N S+I +Y + +I+E D + R SG GG
Sbjct: 156 LKTESGVHRLVRISPYDSNARRHTSFSSIWVYPVVDDSIQIEINESDCRIDTYRSSGAGG 215
Query: 71 QAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVAQ-WDVQVNG-EDSLNAQ 127
Q V T++ V +THIPTGIV++C Q RS +NR A ++L A+ ++ ++ ED+ NA+
Sbjct: 216 QHVNTTDSAVRITHIPTGIVVQCQQERSQHKNRAKAWDMLRARMYEAELKKREDAANAE 274
>gi|335049819|ref|ZP_08542803.1| peptide chain release factor 1 [Megasphaera sp. UPII 199-6]
gi|333762096|gb|EGL39608.1| peptide chain release factor 1 [Megasphaera sp. UPII 199-6]
Length = 360
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 40/60 (66%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
+D KD++ + R SG GGQ + KT++ V +TH+P+GIV++C RS ENR A +L A
Sbjct: 218 LDMKDVRVDYFRASGAGGQHINKTSSAVRMTHMPSGIVVECQDERSQLENRTKALRVLKA 277
>gi|296119521|ref|ZP_06838079.1| peptide chain release factor 1 [Corynebacterium ammoniagenes DSM
20306]
gi|295967404|gb|EFG80671.1| peptide chain release factor 1 [Corynebacterium ammoniagenes DSM
20306]
Length = 358
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 40/60 (66%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
IDEKD++ R SG GGQ V T++ V LTH+PTG+V+ C + RS +N+ A ++L A
Sbjct: 218 IDEKDLRVDVYRSSGKGGQGVNTTDSAVRLTHLPTGLVVTCQRERSQIQNKARAMQVLQA 277
>gi|227505562|ref|ZP_03935611.1| peptide chain release factor 2 [Corynebacterium striatum ATCC 6940]
gi|227197859|gb|EEI77907.1| peptide chain release factor 2 [Corynebacterium striatum ATCC 6940]
Length = 370
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 49/88 (55%), Gaps = 5/88 (5%)
Query: 31 LRNDGYHRNLVSNIDIYSTIPKIDEKDIQERFVR-----GSGPGGQAVAKTNNCVVLTHI 85
N G + + +++ + + D D+ + VR SGPGGQ+V T++ V LTHI
Sbjct: 202 FDNQGRRQTSFAEVEVLPVVEQTDHIDVPDGDVRVDVYRSSGPGGQSVNTTDSAVRLTHI 261
Query: 86 PTGIVIKCHQSRSLSENRKTARELLVAQ 113
PTGIV+ C +S +N+ +A +L A+
Sbjct: 262 PTGIVVTCQNEKSQIQNKASAMRVLQAK 289
>gi|154148037|ref|YP_001406088.1| peptide chain release factor 2 [Campylobacter hominis ATCC BAA-381]
gi|238686699|sp|A7I0P7.1|RF2_CAMHC RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|153804046|gb|ABS51053.1| peptide chain release factor 2 [Campylobacter hominis ATCC BAA-381]
Length = 364
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 39/58 (67%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELL 110
IDEKD++ + R SG GGQ V KT + V +THIPT IV++C R +N+ +A ++L
Sbjct: 233 IDEKDLRIDYYRSSGAGGQHVNKTESAVRITHIPTNIVVQCQNDRDQHKNKASAMKVL 290
>gi|410463281|ref|ZP_11316810.1| peptide chain release factor 2 [Desulfovibrio magneticus str.
Maddingley MBC34]
gi|409983589|gb|EKO39949.1| peptide chain release factor 2 [Desulfovibrio magneticus str.
Maddingley MBC34]
Length = 285
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 53/84 (63%), Gaps = 6/84 (7%)
Query: 41 VSNIDIYSTIP-----KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQ 95
+++D+Y ++ E D++ R SGPGGQ V KT++ + +TH+PT IV++C
Sbjct: 131 FASVDVYPDAGVDIDIEVKEDDLRVDVFRASGPGGQHVNKTSSAIRITHLPTNIVVQCQN 190
Query: 96 SRSLSENRKTARELLVAQ-WDVQV 118
+S NR+TA ++L A+ +D+++
Sbjct: 191 EKSQHRNRETAMKVLKARLYDLEL 214
>gi|424894608|ref|ZP_18318182.1| peptide chain release factor 2 [Rhizobium leguminosarum bv.
trifolii WSM2297]
gi|393178835|gb|EJC78874.1| peptide chain release factor 2 [Rhizobium leguminosarum bv.
trifolii WSM2297]
Length = 376
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 56/102 (54%), Gaps = 10/102 (9%)
Query: 21 LESQVTITRELRNDGYHRNL-----VSNIDIYSTIP-----KIDEKDIQERFVRGSGPGG 70
L+++ + R +R Y N S+I +Y + +I+E D + R SG GG
Sbjct: 190 LKTESGVHRLVRISPYDSNARRHTSFSSIWVYPVVDDSIQIEINEGDCRIDTYRSSGAGG 249
Query: 71 QAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
Q V T++ V +THIPTGIV++C Q RS +NR A ++L A
Sbjct: 250 QHVNTTDSAVRITHIPTGIVVQCQQERSQHKNRAKAWDMLRA 291
>gi|348029556|ref|YP_004872242.1| protein chain release factor A [Glaciecola nitratireducens FR1064]
gi|347946899|gb|AEP30249.1| protein chain release factor A [Glaciecola nitratireducens FR1064]
Length = 362
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 51/94 (54%), Gaps = 14/94 (14%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
+I+ D++ R SG GGQ V KT++ + LTHIPTG+V++C RS +NR A +
Sbjct: 218 EINPADLRVDTFRASGAGGQHVNKTDSAIRLTHIPTGVVVECQDERSQHKNRAKAMSV-- 275
Query: 112 AQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRK 145
L A++ +I+E +R +E RK
Sbjct: 276 ------------LQARLNKIEEDKRNAEEASTRK 297
>gi|290969299|ref|ZP_06560824.1| peptide chain release factor 1 [Megasphaera genomosp. type_1 str.
28L]
gi|290780805|gb|EFD93408.1| peptide chain release factor 1 [Megasphaera genomosp. type_1 str.
28L]
Length = 360
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 40/60 (66%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
+D KD++ + R SG GGQ + KT++ V +TH+P+GIV++C RS ENR A +L A
Sbjct: 218 LDMKDVRVDYFRASGAGGQHINKTSSAVRMTHMPSGIVVECQDERSQLENRTKALRVLKA 277
>gi|255324516|ref|ZP_05365633.1| peptide chain release factor 1 [Corynebacterium tuberculostearicum
SK141]
gi|255298422|gb|EET77722.1| peptide chain release factor 1 [Corynebacterium tuberculostearicum
SK141]
Length = 358
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 42/63 (66%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
ID+KDI+ R SG GGQ V T++ V +TH+PTG+++ C + RS +N+ A ++L A
Sbjct: 218 IDDKDIRVDVYRSSGKGGQGVNTTDSAVRITHLPTGLIVTCQKERSQIQNKARALQVLQA 277
Query: 113 QWD 115
+ D
Sbjct: 278 RLD 280
>gi|297181318|gb|ADI17509.1| protein chain release factor b [uncultured bacterium HF0130_06E03]
Length = 325
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 54/85 (63%), Gaps = 2/85 (2%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
+ ++D++ R G GGQ V KT++ V +TH+PTGIV++C RS +N+ TA ++L A
Sbjct: 194 LKDEDLKIEVYRAGGAGGQHVNKTSSAVRITHVPTGIVVQCQNERSQFKNKATALKVLTA 253
Query: 113 QWDVQVNGEDSLNAQIRRIDEKRRA 137
+ V N +D N +++ ++ +++
Sbjct: 254 R--VYQNIKDEENKKLKEVENSKKS 276
>gi|345562081|gb|EGX45153.1| hypothetical protein AOL_s00173g254 [Arthrobotrys oligospora ATCC
24927]
Length = 434
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 42/64 (65%)
Query: 50 IPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTAREL 109
+ +ID KD++ +R SG GGQ V +T + V +THIPTGIV+ SRS +NR +A +
Sbjct: 276 LAQIDMKDVKTDVMRASGAGGQHVNRTESAVRMTHIPTGIVVAIQDSRSQHKNRSSALTI 335
Query: 110 LVAQ 113
L A+
Sbjct: 336 LKAK 339
>gi|313202185|ref|YP_004040843.1| peptide chain release factor 1 [Methylovorus sp. MP688]
gi|312441501|gb|ADQ85607.1| peptide chain release factor 1 [Methylovorus sp. MP688]
Length = 356
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 51/92 (55%), Gaps = 9/92 (9%)
Query: 48 STIPKIDE--------KDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSL 99
+ +P++DE DI+ R SG GGQ + KT++ V +TH PTGIV++C RS
Sbjct: 200 AVLPEVDEVSDVTINPADIRIDTFRASGAGGQHINKTDSAVRITHFPTGIVVECQDGRSQ 259
Query: 100 SENRKTARELLVAQWDV-QVNGEDSLNAQIRR 130
N+ A ++L A+ QVN + S A RR
Sbjct: 260 HSNKAQAMQVLAARIKAKQVNEQQSKIASERR 291
>gi|218461792|ref|ZP_03501883.1| peptide chain release factor 2 [Rhizobium etli Kim 5]
Length = 320
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 67/119 (56%), Gaps = 12/119 (10%)
Query: 21 LESQVTITRELRNDGYHRNL-----VSNIDIYSTIP-----KIDEKDIQERFVRGSGPGG 70
L+++ + R +R Y N S+I +Y + +I+E D + R SG GG
Sbjct: 136 LKTESGVHRLVRISPYDSNARRHTSFSSIWVYPVVDDSIQIEINESDCRIDTYRSSGAGG 195
Query: 71 QAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVAQ-WDVQVNG-EDSLNAQ 127
Q V T++ V +THIPTGIV++C Q RS +NR A ++L A+ ++ ++ ED+ NA+
Sbjct: 196 QHVNTTDSAVRITHIPTGIVVQCQQERSQHKNRAKAWDMLRARMYEAELKKREDAANAE 254
>gi|448824121|ref|YP_007417290.1| peptide chain release factor RF-2 [Corynebacterium urealyticum DSM
7111]
gi|448277618|gb|AGE37042.1| peptide chain release factor RF-2 [Corynebacterium urealyticum DSM
7111]
Length = 378
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 49/86 (56%), Gaps = 5/86 (5%)
Query: 33 NDGYHRNLVSNIDIYSTIPKID-----EKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 87
N G + + +++ + + D + D++ R SGPGGQ+V T++ V LTHIPT
Sbjct: 213 NQGRRQTSFAEVEVLPVVEQTDSIEVPDADVRVDVYRSSGPGGQSVNTTDSAVRLTHIPT 272
Query: 88 GIVIKCHQSRSLSENRKTARELLVAQ 113
GIV+ C +S +N+ +A +L A+
Sbjct: 273 GIVVTCQNEKSQIQNKASAMRVLQAK 298
>gi|357022173|ref|ZP_09084402.1| peptide chain release factor 2 [Mycobacterium thermoresistibile
ATCC 19527]
gi|356478095|gb|EHI11234.1| peptide chain release factor 2 [Mycobacterium thermoresistibile
ATCC 19527]
Length = 375
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 40/61 (65%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
I E D++ R SGPGGQ+V T++ V LTHIPTGIV+ C +S +N+ +A +L A
Sbjct: 234 IPESDVRVDVYRSSGPGGQSVNTTDSAVRLTHIPTGIVVTCQNEKSQLQNKLSAMRVLQA 293
Query: 113 Q 113
+
Sbjct: 294 K 294
>gi|306835871|ref|ZP_07468866.1| peptide chain release factor RF1 [Corynebacterium accolens ATCC
49726]
gi|304568236|gb|EFM43806.1| peptide chain release factor RF1 [Corynebacterium accolens ATCC
49726]
Length = 358
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 42/63 (66%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
ID+KDI+ R SG GGQ V T++ V +TH+PTG+++ C + RS +N+ A ++L A
Sbjct: 218 IDDKDIRVDVYRSSGKGGQGVNTTDSAVRITHLPTGLIVTCQKERSQIQNKARALQVLQA 277
Query: 113 QWD 115
+ D
Sbjct: 278 RLD 280
>gi|348518285|ref|XP_003446662.1| PREDICTED: peptide chain release factor 1, mitochondrial-like
[Oreochromis niloticus]
Length = 399
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 46/71 (64%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
ID KD++ R GPGGQ+V T++ V + H+PTGI +C Q+RS +NR+TA +L A
Sbjct: 241 IDPKDLRIDTFRSRGPGGQSVNTTDSAVRVVHLPTGITAECQQTRSQLQNRETAMRMLRA 300
Query: 113 QWDVQVNGEDS 123
+ + G+++
Sbjct: 301 RLYQGMMGKET 311
>gi|423351149|ref|ZP_17328800.1| peptide chain release factor 2 [Turicella otitidis ATCC 51513]
gi|404386822|gb|EJZ81959.1| peptide chain release factor 2 [Turicella otitidis ATCC 51513]
Length = 358
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 47/78 (60%), Gaps = 5/78 (6%)
Query: 41 VSNIDIYSTIPKIDEKDIQERFVR-----GSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQ 95
+ +++ + + D DI E +R SGPGGQ+V T++ V +TH+PTGIV+ C
Sbjct: 201 FAEVEVLPVVEQTDHIDIPESEIRVDVYRSSGPGGQSVNTTDSAVRMTHLPTGIVVTCQN 260
Query: 96 SRSLSENRKTARELLVAQ 113
+S +NR +A ++L A+
Sbjct: 261 EKSQIQNRASALKVLQAK 278
>gi|172041186|ref|YP_001800900.1| peptide chain release factor 2 [Corynebacterium urealyticum DSM
7109]
gi|171852490|emb|CAQ05466.1| peptide chain release factor RF-2 [Corynebacterium urealyticum DSM
7109]
Length = 377
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 49/86 (56%), Gaps = 5/86 (5%)
Query: 33 NDGYHRNLVSNIDIYSTIPKID-----EKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 87
N G + + +++ + + D + D++ R SGPGGQ+V T++ V LTHIPT
Sbjct: 213 NQGRRQTSFAEVEVLPVVEQTDSIEVPDADVRVDVYRSSGPGGQSVNTTDSAVRLTHIPT 272
Query: 88 GIVIKCHQSRSLSENRKTARELLVAQ 113
GIV+ C +S +N+ +A +L A+
Sbjct: 273 GIVVTCQNEKSQIQNKASAMRVLQAK 298
>gi|88803826|ref|ZP_01119349.1| peptide chain release factor 1 [Polaribacter irgensii 23-P]
gi|88780354|gb|EAR11536.1| peptide chain release factor 1 [Polaribacter irgensii 23-P]
Length = 358
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 52/77 (67%), Gaps = 4/77 (5%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
+I+ KD++ F SGPGGQ+V T + V LTH+PTG+V +C +S +N++ A ++L
Sbjct: 214 EINPKDVRIDFFCSSGPGGQSVNTTYSAVRLTHVPTGLVAQCQDQKSQHKNKEKAFKVLR 273
Query: 112 AQ-WDVQV---NGEDSL 124
++ +D+++ N ED+L
Sbjct: 274 SRLYDMELAKKNAEDAL 290
>gi|295099339|emb|CBK88428.1| bacterial peptide chain release factor 1 (bRF-1) [Eubacterium
cylindroides T2-87]
Length = 316
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 37/60 (61%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
ID D++ +R SG GGQ V KT++ V + H PTGIV+KC RS ENR TA + A
Sbjct: 217 IDMNDLEIEAMRASGAGGQHVNKTDSAVRIVHKPTGIVVKCQDGRSQHENRATALATIAA 276
>gi|285018127|ref|YP_003375838.1| peptide chain release factor 2 [Xanthomonas albilineans GPE PC73]
gi|283473345|emb|CBA15850.1| probable peptide chain release factor 2 protein [Xanthomonas
albilineans GPE PC73]
Length = 373
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 42/71 (59%), Gaps = 5/71 (7%)
Query: 43 NIDIYSTIPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSEN 102
NIDI I+ D++ R SG GGQ V KT + V +TH+PTGIV+ C RS +N
Sbjct: 228 NIDI-----DINPADLKTDVYRSSGAGGQHVNKTESAVRITHVPTGIVVACQTGRSQHQN 282
Query: 103 RKTARELLVAQ 113
R A ++L A+
Sbjct: 283 RDNAMKMLAAK 293
>gi|116251510|ref|YP_767348.1| peptide chain release factor 2 [Rhizobium leguminosarum bv. viciae
3841]
gi|115256158|emb|CAK07239.1| putative peptide chain release factor 2 (rf-2) [Rhizobium
leguminosarum bv. viciae 3841]
Length = 342
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 56/102 (54%), Gaps = 10/102 (9%)
Query: 21 LESQVTITRELRNDGYHRNL-----VSNIDIYSTIP-----KIDEKDIQERFVRGSGPGG 70
L+++ + R +R Y N S+I +Y + +I+E D + R SG GG
Sbjct: 156 LKTESGVHRLVRISPYDSNARRHTSFSSIWVYPVVDDSIQIEINESDCRIDTYRSSGAGG 215
Query: 71 QAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
Q V T++ V +THIPTGIV++C Q RS +NR A ++L A
Sbjct: 216 QHVNTTDSAVRITHIPTGIVVQCQQERSQHKNRAKAWDMLRA 257
>gi|111225294|ref|YP_716088.1| peptide chain release factor 1 [Frankia alni ACN14a]
gi|111152826|emb|CAJ64570.1| peptide chain release factor RF-1 [Frankia alni ACN14a]
Length = 362
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 52/91 (57%), Gaps = 6/91 (6%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKT------ 105
+ID D++ R SGPGGQ+V T++ V +TH+PTG+V+ C +S +N+++
Sbjct: 220 EIDPNDLRIDVFRSSGPGGQSVNTTDSAVRITHVPTGLVVSCQNEKSQLQNKESALRILR 279
Query: 106 ARELLVAQWDVQVNGEDSLNAQIRRIDEKRR 136
AR L VA+ + + +Q+R +D R
Sbjct: 280 ARLLGVAREKAEAEASLARASQVRTVDRSER 310
>gi|407007092|gb|EKE22847.1| hypothetical protein ACD_6C00704G0002 [uncultured bacterium]
Length = 362
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 50/76 (65%), Gaps = 1/76 (1%)
Query: 40 LVSNIDIYSTIPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSL 99
++ ID+ +++ +I+ D++ R SG GGQ V KT++ V +THIPTG V++C + RS
Sbjct: 205 ILPEIDVDTSV-EINSSDLRIDTYRASGAGGQHVNKTDSAVRITHIPTGTVVECQEERSQ 263
Query: 100 SENRKTARELLVAQWD 115
+N+ A LLV++ +
Sbjct: 264 HKNKAKAMALLVSRLE 279
>gi|385678972|ref|ZP_10052900.1| peptide chain release factor RF-2 [Amycolatopsis sp. ATCC 39116]
Length = 367
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 37/55 (67%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTA 106
+I EKDI+ R SGPGGQ+V T++ V +TH+PTGIV+ C +S +N+ A
Sbjct: 231 EIPEKDIRVDVFRSSGPGGQSVNTTDSAVRITHLPTGIVVSCQNEKSQLQNKAAA 285
>gi|384156590|ref|YP_005539405.1| peptide chain release factor 2 [Arcobacter butzleri ED-1]
gi|345470144|dbj|BAK71595.1| peptide chain release factor 2 [Arcobacter butzleri ED-1]
Length = 365
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 40/58 (68%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELL 110
I++KDI+ R SG GGQ V KT + + +THIPTGIV++C RS +N+ +A ++L
Sbjct: 233 IEDKDIRIDTYRASGAGGQHVNKTESAIRITHIPTGIVVQCQNDRSQHKNKDSAFKML 290
>gi|331006967|ref|ZP_08330210.1| Peptide chain release factor 1 [gamma proteobacterium IMCC1989]
gi|330419229|gb|EGG93652.1| Peptide chain release factor 1 [gamma proteobacterium IMCC1989]
Length = 360
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 39/60 (65%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
I++ D++ R SG GGQ V KT++ + LTHIPTG+V++C RS +NR A LL A
Sbjct: 219 INKADLRVDTFRASGAGGQHVNKTDSAIRLTHIPTGVVVECQDERSQHKNRARAMSLLAA 278
>gi|157738274|ref|YP_001490958.1| peptide chain release factor 2 [Arcobacter butzleri RM4018]
gi|315636563|ref|ZP_07891799.1| peptide chain release factor RF2 [Arcobacter butzleri JV22]
gi|166977372|sp|A8EWG5.1|RF2_ARCB4 RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|157700128|gb|ABV68288.1| peptide chain release factor 2 [Arcobacter butzleri RM4018]
gi|315479212|gb|EFU69909.1| peptide chain release factor RF2 [Arcobacter butzleri JV22]
Length = 365
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 40/58 (68%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELL 110
I++KDI+ R SG GGQ V KT + + +THIPTGIV++C RS +N+ +A ++L
Sbjct: 233 IEDKDIRIDTYRASGAGGQHVNKTESAIRITHIPTGIVVQCQNDRSQHKNKDSAFKML 290
>gi|359426085|ref|ZP_09217172.1| peptide chain release factor 2 [Gordonia amarae NBRC 15530]
gi|358238562|dbj|GAB06754.1| peptide chain release factor 2 [Gordonia amarae NBRC 15530]
Length = 371
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 39/61 (63%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
I E D++ R SGPGGQ+V T++ V LTHIPTGIV+ C +S +N+ A +L A
Sbjct: 235 IAETDLRVDVYRSSGPGGQSVNTTDSAVRLTHIPTGIVVTCQNEKSQLQNKAAAMRVLQA 294
Query: 113 Q 113
+
Sbjct: 295 K 295
>gi|238020780|ref|ZP_04601206.1| hypothetical protein GCWU000324_00670 [Kingella oralis ATCC 51147]
gi|237867760|gb|EEP68766.1| hypothetical protein GCWU000324_00670 [Kingella oralis ATCC 51147]
Length = 367
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 54/91 (59%), Gaps = 9/91 (9%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
+I+ D++ R SG GGQ + KT++ V +TH+PTGIV++ SRS ENR+ E+L
Sbjct: 235 EINPADLRTDTYRASGAGGQHINKTDSAVRITHLPTGIVVQSQSSRSQHENRRIVMEMLR 294
Query: 112 AQWDVQVNGEDSLNAQIRRIDEKRRATQEQK 142
A+ ++R+ +E+++A +E K
Sbjct: 295 AKL---------FELEMRKRNEEKQALEEGK 316
>gi|419760651|ref|ZP_14286920.1| peptide chain release factor 1 [Thermosipho africanus H17ap60334]
gi|407514157|gb|EKF49002.1| peptide chain release factor 1 [Thermosipho africanus H17ap60334]
Length = 354
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 43/70 (61%), Gaps = 5/70 (7%)
Query: 41 VSNIDIYSTIPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLS 100
+ ++D++ ID KDI+ R SG GGQ V KT + + +THIPTGIV+ C RS
Sbjct: 200 IKDVDVF-----IDPKDIRIDTYRASGAGGQYVNKTESAIRITHIPTGIVVTCQSERSQH 254
Query: 101 ENRKTARELL 110
+N++ A +L
Sbjct: 255 QNKEKALMVL 264
>gi|227501694|ref|ZP_03931743.1| peptide chain release factor 1 [Corynebacterium accolens ATCC
49725]
gi|227077719|gb|EEI15682.1| peptide chain release factor 1 [Corynebacterium accolens ATCC
49725]
Length = 352
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 42/63 (66%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
ID+KDI+ R SG GGQ V T++ V +TH+PTG+++ C + RS +N+ A ++L A
Sbjct: 212 IDDKDIRVDVYRSSGKGGQGVNTTDSAVRITHLPTGLIVTCQKERSQIQNKARALQVLQA 271
Query: 113 QWD 115
+ D
Sbjct: 272 RLD 274
>gi|699334|gb|AAA63095.1| prfA [Mycobacterium leprae]
Length = 357
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 48/90 (53%), Gaps = 6/90 (6%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
IDE D++ R SG GGQ V T++ V +TH+PTG+V+ C RS +N+ A ++L A
Sbjct: 218 IDESDLRIDVYRSSGKGGQGVNTTDSAVRITHLPTGVVVTCQNERSQLQNKTRALQVLAA 277
Query: 113 QWDVQVNGEDSLNA------QIRRIDEKRR 136
+ + NA QIR +D R
Sbjct: 278 RLQAMAEEQALANASADRASQIRTVDRSER 307
>gi|317133128|ref|YP_004092442.1| peptide chain release factor 2 [Ethanoligenens harbinense YUAN-3]
gi|315471107|gb|ADU27711.1| peptide chain release factor 2 [Ethanoligenens harbinense YUAN-3]
Length = 377
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 42/70 (60%), Gaps = 8/70 (11%)
Query: 49 TIPKIDE--------KDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLS 100
+P+ID+ +DI+ R SG GGQ + KT++ V LTH+PTGIV+ C RS
Sbjct: 225 VMPEIDDSIEVDIRPEDIKMDVFRSSGAGGQHINKTSSAVRLTHLPTGIVVSCQNERSQH 284
Query: 101 ENRKTARELL 110
+NR+ A +L
Sbjct: 285 QNREMAMRML 294
>gi|153814377|ref|ZP_01967045.1| hypothetical protein RUMTOR_00587 [Ruminococcus torques ATCC 27756]
gi|317500091|ref|ZP_07958326.1| peptide chain release factor 1 [Lachnospiraceae bacterium
8_1_57FAA]
gi|331087685|ref|ZP_08336611.1| peptide chain release factor 1 [Lachnospiraceae bacterium
3_1_46FAA]
gi|336438107|ref|ZP_08617748.1| peptide chain release factor 1 [Lachnospiraceae bacterium
1_1_57FAA]
gi|145848773|gb|EDK25691.1| peptide chain release factor 1 [Ruminococcus torques ATCC 27756]
gi|316898576|gb|EFV20612.1| peptide chain release factor 1 [Lachnospiraceae bacterium
8_1_57FAA]
gi|330409666|gb|EGG89102.1| peptide chain release factor 1 [Lachnospiraceae bacterium
3_1_46FAA]
gi|336015151|gb|EGN44975.1| peptide chain release factor 1 [Lachnospiraceae bacterium
1_1_57FAA]
Length = 356
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
IDEKDI+ +R SG GGQ V T++ V LTH PTGIVI +S +N++ A LL +
Sbjct: 215 IDEKDIRIDVMRASGNGGQCVNTTDSAVRLTHYPTGIVIYSQTEKSQLQNKEKAFRLLRS 274
Query: 113 Q-WDVQVNGEDSLNAQIRR 130
+ +D+++ + + A+ RR
Sbjct: 275 KLYDLELEKQQASEAEARR 293
>gi|86357282|ref|YP_469174.1| peptide chain release factor 2 [Rhizobium etli CFN 42]
gi|86281384|gb|ABC90447.1| peptide chain release factor 2 protein [Rhizobium etli CFN 42]
Length = 322
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 54/102 (52%), Gaps = 10/102 (9%)
Query: 21 LESQVTITRELRNDGYHRNL-----VSNIDIYSTIPK-----IDEKDIQERFVRGSGPGG 70
L+++ + R +R Y N S+I +Y + I+E D + R SG GG
Sbjct: 136 LKTESGVHRLVRISPYDSNARRHTSFSSIWVYPVVDDSINIDINESDCRIDTYRSSGAGG 195
Query: 71 QAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
Q V T++ V +THIPTGIV+ C Q RS +NR A E+L A
Sbjct: 196 QHVNTTDSAVRITHIPTGIVVACQQERSQHKNRAKAWEMLRA 237
>gi|395237481|ref|ZP_10415549.1| peptide chain release factor 2 [Turicella otitidis ATCC 51513]
gi|394487252|emb|CCI83637.1| peptide chain release factor 2 [Turicella otitidis ATCC 51513]
Length = 369
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 47/78 (60%), Gaps = 5/78 (6%)
Query: 41 VSNIDIYSTIPKIDEKDIQERFVR-----GSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQ 95
+ +++ + + D DI E +R SGPGGQ+V T++ V +TH+PTGIV+ C
Sbjct: 212 FAEVEVLPVVEQTDHIDIPESEIRVDVYRSSGPGGQSVNTTDSAVRMTHLPTGIVVTCQN 271
Query: 96 SRSLSENRKTARELLVAQ 113
+S +NR +A ++L A+
Sbjct: 272 EKSQIQNRASALKVLQAK 289
>gi|315445399|ref|YP_004078278.1| peptide chain release factor 2 (bRF-2) [Mycobacterium gilvum Spyr1]
gi|315263702|gb|ADU00444.1| bacterial peptide chain release factor 2 (bRF-2) [Mycobacterium
gilvum Spyr1]
Length = 372
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 40/61 (65%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
I E D++ R SGPGGQ+V T++ V LTHIPTGIV+ C +S +N+ +A +L A
Sbjct: 235 IPEGDVRVDVYRSSGPGGQSVNTTDSAVRLTHIPTGIVVTCQNEKSQLQNKVSAMRVLQA 294
Query: 113 Q 113
+
Sbjct: 295 K 295
>gi|300313560|ref|YP_003777652.1| peptide chain release factor 1 [Herbaspirillum seropedicae SmR1]
gi|300076345|gb|ADJ65744.1| peptide chain release factor 1 (RF-1) protein [Herbaspirillum
seropedicae SmR1]
Length = 359
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 50/80 (62%), Gaps = 1/80 (1%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
+I+ DI+ R SG GGQ + KT++ V +TH+PTGIV++C RS +N+ A ++L
Sbjct: 216 EINPADIRIDTYRASGAGGQHINKTDSAVRITHLPTGIVVECQDDRSQHKNKAQAMKVLA 275
Query: 112 AQW-DVQVNGEDSLNAQIRR 130
A+ DVQ+ + S A R+
Sbjct: 276 ARIKDVQLRQQQSEEAATRK 295
>gi|32266159|ref|NP_860191.1| peptide chain release factor 2 [Helicobacter hepaticus ATCC 51449]
gi|81666133|sp|Q7VIE6.1|RF2_HELHP RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|32262209|gb|AAP77257.1| peptide chain release factor 2 [Helicobacter hepaticus ATCC 51449]
Length = 366
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 40/59 (67%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELL 110
+I++KDI+ R SG GGQ V KT + + +TH PTGIV++C RS +N+ TA ++L
Sbjct: 232 EIEDKDIRIDTYRASGAGGQHVNKTESAIRITHFPTGIVVQCQNDRSQHKNKATAMKML 290
>gi|440226311|ref|YP_007333402.1| peptide chain release factor 2 [Rhizobium tropici CIAT 899]
gi|440037822|gb|AGB70856.1| peptide chain release factor 2 [Rhizobium tropici CIAT 899]
Length = 342
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 56/102 (54%), Gaps = 10/102 (9%)
Query: 21 LESQVTITRELRNDGYHRNL-----VSNIDIYSTIP-----KIDEKDIQERFVRGSGPGG 70
L+++ + R +R Y N S+I +Y + +I+E D + R SG GG
Sbjct: 156 LKTESGVHRLVRISPYDSNARRHTSFSSIWVYPVVDDSIQIEINESDCRIDTYRSSGAGG 215
Query: 71 QAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
Q V T++ V +THIPTGIV++C Q RS +NR A ++L A
Sbjct: 216 QHVNTTDSAVRITHIPTGIVVQCQQERSQHKNRAKAWDMLRA 257
>gi|392574783|gb|EIW67918.1| hypothetical protein TREMEDRAFT_63806 [Tremella mesenterica DSM
1558]
Length = 394
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 47/82 (57%), Gaps = 3/82 (3%)
Query: 44 IDIYSTIPK---IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLS 100
+ IY +P +D KD++ +R G GGQ V KT + V LTH+PTGI + SRS
Sbjct: 233 LPIYPDLPDAPLVDPKDVKTEVMRSRGAGGQHVNKTESAVRLTHLPTGITVSMQDSRSQH 292
Query: 101 ENRKTARELLVAQWDVQVNGED 122
+NR A E+L A+ + + E+
Sbjct: 293 QNRAWAWEILRARLSERKHAEE 314
>gi|319957316|ref|YP_004168579.1| peptide chain release factor 2 [Nitratifractor salsuginis DSM
16511]
gi|319419720|gb|ADV46830.1| bacterial peptide chain release factor 2 (bRF-2) [Nitratifractor
salsuginis DSM 16511]
Length = 372
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 44/68 (64%), Gaps = 5/68 (7%)
Query: 43 NIDIYSTIPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSEN 102
+IDI +I++KDI+ R SG GGQ V KT + + +THIPTGIV++C RS +N
Sbjct: 228 DIDI-----EIEDKDIRIDTYRASGAGGQHVNKTESAIRITHIPTGIVVQCQNDRSQHKN 282
Query: 103 RKTARELL 110
+ A ++L
Sbjct: 283 KAAAMKML 290
>gi|385791210|ref|YP_005822333.1| peptide chain release factor 1 [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|302327519|gb|ADL26720.1| peptide chain release factor 1 [Fibrobacter succinogenes subsp.
succinogenes S85]
Length = 358
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/59 (49%), Positives = 37/59 (62%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELL 110
+I E DI R SG GGQ + KT++ V LTHIPTG+V+ C RS +NR A E+L
Sbjct: 216 EIREADIHMDTYRSSGAGGQYINKTDSAVRLTHIPTGVVVSCQTERSQLQNRLHAMEML 274
>gi|282889838|ref|ZP_06298377.1| hypothetical protein pah_c004o248 [Parachlamydia acanthamoebae str.
Hall's coccus]
gi|338175876|ref|YP_004652686.1| peptide chain release factor 1 [Parachlamydia acanthamoebae UV-7]
gi|281500412|gb|EFB42692.1| hypothetical protein pah_c004o248 [Parachlamydia acanthamoebae str.
Hall's coccus]
gi|336480234|emb|CCB86832.1| peptide chain release factor 1 [Parachlamydia acanthamoebae UV-7]
Length = 354
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 40/61 (65%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
IDEKD++ R SG GGQ V T++ V LTH PTGIV+ C + RS +N++ A LL A
Sbjct: 216 IDEKDLRVDTYRSSGAGGQHVNTTDSAVRLTHNPTGIVVYCQEERSQHKNKEKAMRLLKA 275
Query: 113 Q 113
+
Sbjct: 276 K 276
>gi|188997267|ref|YP_001931518.1| peptide chain release factor 2 [Sulfurihydrogenibium sp. YO3AOP1]
gi|229576671|sp|B2V5M0.1|RF2_SULSY RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|188932334|gb|ACD66964.1| peptide chain release factor 2 [Sulfurihydrogenibium sp. YO3AOP1]
Length = 369
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 44/74 (59%), Gaps = 8/74 (10%)
Query: 48 STIPKIDE--------KDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSL 99
S IP+IDE +D++ R SG GGQ V KT++ V +THIPTGIV+ C RS
Sbjct: 220 SVIPEIDEDIKVEINEEDLRIDTYRASGAGGQHVNKTDSAVRITHIPTGIVVACQSERSQ 279
Query: 100 SENRKTARELLVAQ 113
+N+ A +L A+
Sbjct: 280 LQNKLKATNMLKAK 293
>gi|30692908|ref|NP_851096.1| high chlorophyll fluorescent 109 protein [Arabidopsis thaliana]
gi|8777302|dbj|BAA96892.1| translation releasing factor RF-2 [Arabidopsis thaliana]
gi|15810391|gb|AAL07083.1| putative translation releasing factor RF-2 [Arabidopsis thaliana]
gi|21436317|gb|AAM51328.1| putative translation releasing factor RF-2 [Arabidopsis thaliana]
gi|21536944|gb|AAM61285.1| translation releasing factor RF-2 [Arabidopsis thaliana]
gi|332006668|gb|AED94051.1| high chlorophyll fluorescent 109 protein [Arabidopsis thaliana]
Length = 456
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 65/132 (49%), Gaps = 21/132 (15%)
Query: 31 LRNDGYHRNLVSNIDIYSTIPK------IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTH 84
+ G + S +++ +P+ I E+D+ F R G GGQ V K V +TH
Sbjct: 286 FNSKGLRQTSFSGVEVMPLLPEEAVGIEIPEEDLDISFTRAGGKGGQNVNKVETAVRITH 345
Query: 85 IPTGIVIKCHQSRSLSENRKTARELLVAQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKR 144
IPTG+ ++C + RS N+ R L+ L A++ I E++RAT E K+
Sbjct: 346 IPTGVAVRCTEERSQLANK--TRALI------------RLKAKLMVIAEEQRAT-EIKEI 390
Query: 145 KLDALKKAWKER 156
+ DA+K W ++
Sbjct: 391 RGDAVKAEWGQQ 402
>gi|295657325|ref|XP_002789232.1| peptide chain release factor 1 [Paracoccidioides sp. 'lutzii' Pb01]
gi|226284000|gb|EEH39566.1| peptide chain release factor 1 [Paracoccidioides sp. 'lutzii' Pb01]
Length = 438
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/104 (38%), Positives = 54/104 (51%), Gaps = 22/104 (21%)
Query: 43 NIDIYSTIPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSEN 102
N D Y ID +++ +R SG GGQ V KT + + LTHIPTGIV+ SRS EN
Sbjct: 270 NSDFY-----IDPREVNVEKMRASGAGGQHVNKTESAIRLTHIPTGIVVGMQDSRSQHEN 324
Query: 103 RKTARELLVAQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKL 146
R+ A +LL A RI ++RR +E++ KL
Sbjct: 325 RRKAWQLLRA-----------------RIAQQRREAREEEMVKL 351
>gi|30692913|ref|NP_851097.1| high chlorophyll fluorescent 109 protein [Arabidopsis thaliana]
gi|13568392|emb|CAC36322.1| translation releasing factor2 [Arabidopsis thaliana]
gi|332006670|gb|AED94053.1| high chlorophyll fluorescent 109 protein [Arabidopsis thaliana]
Length = 455
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 65/132 (49%), Gaps = 21/132 (15%)
Query: 31 LRNDGYHRNLVSNIDIYSTIPK------IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTH 84
+ G + S +++ +P+ I E+D+ F R G GGQ V K V +TH
Sbjct: 285 FNSKGLRQTSFSGVEVMPLLPEEAVGIEIPEEDLDISFTRAGGKGGQNVNKVETAVRITH 344
Query: 85 IPTGIVIKCHQSRSLSENRKTARELLVAQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKR 144
IPTG+ ++C + RS N+ R L+ L A++ I E++RAT E K+
Sbjct: 345 IPTGVAVRCTEERSQLANK--TRALI------------RLKAKLMVIAEEQRAT-EIKEI 389
Query: 145 KLDALKKAWKER 156
+ DA+K W ++
Sbjct: 390 RGDAVKAEWGQQ 401
>gi|15827565|ref|NP_301828.1| peptide chain release factor 1 [Mycobacterium leprae TN]
gi|221230042|ref|YP_002503458.1| peptide chain release factor 1 [Mycobacterium leprae Br4923]
gi|13432207|sp|P45833.2|RF1_MYCLE RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|254790892|sp|B8ZR31.1|RF1_MYCLB RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|13093115|emb|CAC31515.1| peptide chain release factor 1 [Mycobacterium leprae]
gi|219933149|emb|CAR71229.1| peptide chain release factor 1 [Mycobacterium leprae Br4923]
Length = 361
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 48/90 (53%), Gaps = 6/90 (6%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
IDE D++ R SG GGQ V T++ V +TH+PTG+V+ C RS +N+ A ++L A
Sbjct: 222 IDESDLRIDVYRSSGKGGQGVNTTDSAVRITHLPTGVVVTCQNERSQLQNKTRALQVLAA 281
Query: 113 QWDVQVNGEDSLNA------QIRRIDEKRR 136
+ + NA QIR +D R
Sbjct: 282 RLQAMAEEQALANASADRASQIRTVDRSER 311
>gi|315127042|ref|YP_004069045.1| peptide chain release factor 1 [Pseudoalteromonas sp. SM9913]
gi|359439408|ref|ZP_09229379.1| peptide chain release factor 1 [Pseudoalteromonas sp. BSi20311]
gi|359446999|ref|ZP_09236626.1| peptide chain release factor 1 [Pseudoalteromonas sp. BSi20439]
gi|315015556|gb|ADT68894.1| peptide chain release factor 1 [Pseudoalteromonas sp. SM9913]
gi|358025884|dbj|GAA65628.1| peptide chain release factor 1 [Pseudoalteromonas sp. BSi20311]
gi|358039136|dbj|GAA72875.1| peptide chain release factor 1 [Pseudoalteromonas sp. BSi20439]
Length = 361
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 51/95 (53%), Gaps = 13/95 (13%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
+I+ DI+ R SG GGQ V KT++ + +TH+PTG+V++C RS +NR A +L
Sbjct: 218 EINTADIKVDTFRASGAGGQHVNKTDSAIRITHLPTGVVVECQDERSQHKNRAKAMSVLA 277
Query: 112 AQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKL 146
A+ + DEKR A + ++R L
Sbjct: 278 ARLQ-------------QAEDEKRHAAEASERRNL 299
>gi|225847994|ref|YP_002728157.1| peptide chain release factor 2 [Sulfurihydrogenibium azorense
Az-Fu1]
gi|225644274|gb|ACN99324.1| peptide chain release factor 2 [Sulfurihydrogenibium azorense
Az-Fu1]
Length = 370
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 44/74 (59%), Gaps = 8/74 (10%)
Query: 48 STIPKIDEK--------DIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSL 99
S IP+IDE+ D++ R SG GGQ V KT++ V +THIPTGIV+ C RS
Sbjct: 220 SVIPEIDEEIKVEINEEDLRIDTFRASGAGGQHVNKTDSAVRITHIPTGIVVACQSERSQ 279
Query: 100 SENRKTARELLVAQ 113
+N+ A +L A+
Sbjct: 280 LQNKLKALNMLKAK 293
>gi|226323866|ref|ZP_03799384.1| hypothetical protein COPCOM_01641 [Coprococcus comes ATCC 27758]
gi|225207415|gb|EEG89769.1| peptide chain release factor 1 [Coprococcus comes ATCC 27758]
Length = 358
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
IDEKDI+ +R SG GGQ V T++ V LTH PTGIVI +S +N++ A LL +
Sbjct: 215 IDEKDIRIDVMRASGNGGQCVNTTDSAVRLTHYPTGIVIYSQTEKSQLQNKEKAFRLLRS 274
Query: 113 Q-WDVQVNGEDSLNAQIRR 130
+ +++++ + S A+ RR
Sbjct: 275 KLYELELEKQHSAEAEARR 293
>gi|451943954|ref|YP_007464590.1| peptide chain release factor 1 [Corynebacterium halotolerans YIM
70093 = DSM 44683]
gi|451903341|gb|AGF72228.1| peptide chain release factor 1 [Corynebacterium halotolerans YIM
70093 = DSM 44683]
Length = 357
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 40/61 (65%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
+I+EKD++ R SG GGQ V T++ V LTH+PTGIV+ C RS +N+ A ++L
Sbjct: 217 EINEKDLRVDVYRSSGKGGQGVNTTDSAVRLTHLPTGIVVTCQNERSQIQNKARAMQVLA 276
Query: 112 A 112
A
Sbjct: 277 A 277
>gi|217969845|ref|YP_002355079.1| peptide chain release factor 1 [Thauera sp. MZ1T]
gi|217507172|gb|ACK54183.1| peptide chain release factor 1 [Thauera sp. MZ1T]
Length = 360
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 51/92 (55%), Gaps = 9/92 (9%)
Query: 48 STIPKIDE--------KDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSL 99
+ +P+ DE D++ R SG GGQ + KT++ V +THIPTGIV++C RS
Sbjct: 204 AVLPEADEVEAVDINPADLRIDTFRASGAGGQHINKTDSAVRITHIPTGIVVECQDDRSQ 263
Query: 100 SENRKTARELLVAQ-WDVQVNGEDSLNAQIRR 130
N+ A +L A+ +D +V + S A R+
Sbjct: 264 HRNKAQAMAVLAARLYDARVRAQQSAEAAQRK 295
>gi|162147177|ref|YP_001601638.1| peptide chain release factor 2 [Gluconacetobacter diazotrophicus
PAl 5]
gi|161785754|emb|CAP55325.1| Peptide chain release factor 2 [Gluconacetobacter diazotrophicus
PAl 5]
Length = 322
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 38/61 (62%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
+I+E D++ R SG GGQ V KT + + +THIPTGI++ C RS NR TA +L
Sbjct: 177 EINEADLKVDTFRASGAGGQHVNKTESAIRITHIPTGIIVACQTDRSQHRNRATAMTMLK 236
Query: 112 A 112
A
Sbjct: 237 A 237
>gi|145225030|ref|YP_001135708.1| peptide chain release factor 2 [Mycobacterium gilvum PYR-GCK]
gi|189040001|sp|A4TDE5.1|RF2_MYCGI RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|145217516|gb|ABP46920.1| bacterial peptide chain release factor 2 (bRF-2) [Mycobacterium
gilvum PYR-GCK]
Length = 372
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 40/61 (65%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
I E D++ R SGPGGQ+V T++ V LTHIPTGIV+ C +S +N+ +A +L A
Sbjct: 235 IPEGDVRVDVYRSSGPGGQSVNTTDSAVRLTHIPTGIVVTCQNEKSQLQNKVSAMRVLQA 294
Query: 113 Q 113
+
Sbjct: 295 K 295
>gi|73667064|ref|YP_303080.1| peptide chain release factor 1 [Ehrlichia canis str. Jake]
gi|119361538|sp|Q3YS23.1|RF1_EHRCJ RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|72394205|gb|AAZ68482.1| bacterial peptide chain release factor 1 (bRF-1) [Ehrlichia canis
str. Jake]
Length = 359
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 53/80 (66%), Gaps = 1/80 (1%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
KIDEKD++ R SGPGGQ+V T++ V +THIP+GIV+ +S +N+ A ++L
Sbjct: 216 KIDEKDLRIDVYRSSGPGGQSVNTTDSAVRITHIPSGIVVIQQDEKSQHKNKNKALKVLR 275
Query: 112 AQ-WDVQVNGEDSLNAQIRR 130
A+ ++++ DS +Q+R+
Sbjct: 276 ARLYNLEKQKRDSEISQMRK 295
>gi|420156842|ref|ZP_14663682.1| peptide chain release factor 2 [Clostridium sp. MSTE9]
gi|394756852|gb|EJF39911.1| peptide chain release factor 2 [Clostridium sp. MSTE9]
Length = 375
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 41/65 (63%)
Query: 49 TIPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARE 108
T +I DI+ + R SG GGQ V KT++ V LTH PTGIV+ C RS +NR A +
Sbjct: 230 TSVEISPDDIEMQVYRASGAGGQKVNKTSSAVRLTHKPTGIVVSCQVERSQYQNRDVAMK 289
Query: 109 LLVAQ 113
+L+++
Sbjct: 290 MLISK 294
>gi|392554291|ref|ZP_10301428.1| peptide chain release factor 1 [Pseudoalteromonas undina NCIMB
2128]
Length = 361
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 51/95 (53%), Gaps = 13/95 (13%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
+I+ DI+ R SG GGQ V KT++ + +TH+PTG+V++C RS +NR A +L
Sbjct: 218 EINTADIKVDTFRASGAGGQHVNKTDSAIRITHLPTGVVVECQDERSQHKNRAKAMSVLA 277
Query: 112 AQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKL 146
A+ + DEKR A + ++R L
Sbjct: 278 ARLQ-------------QAEDEKRHAAEASERRNL 299
>gi|335046352|ref|ZP_08539375.1| peptide chain release factor 1 [Oribacterium sp. oral taxon 108
str. F0425]
gi|333760138|gb|EGL37695.1| peptide chain release factor 1 [Oribacterium sp. oral taxon 108
str. F0425]
Length = 369
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 51/80 (63%), Gaps = 1/80 (1%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
+I+ D++ R SG GGQ + KT++ V L H+PTG+V +C + RS +NR+ A LL
Sbjct: 225 EINPADVKMEVFRSSGAGGQHINKTSSAVRLIHVPTGMVAECQEERSQVQNREKAMRLLR 284
Query: 112 AQ-WDVQVNGEDSLNAQIRR 130
A+ +++++ + NA+ +R
Sbjct: 285 ARLYEIELEKQQKENAEEKR 304
>gi|261416348|ref|YP_003250031.1| peptide chain release factor 1 [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|261372804|gb|ACX75549.1| peptide chain release factor 1 [Fibrobacter succinogenes subsp.
succinogenes S85]
Length = 355
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/59 (49%), Positives = 37/59 (62%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELL 110
+I E DI R SG GGQ + KT++ V LTHIPTG+V+ C RS +NR A E+L
Sbjct: 213 EIREADIHMDTYRSSGAGGQYINKTDSAVRLTHIPTGVVVSCQTERSQLQNRLHAMEML 271
>gi|418047786|ref|ZP_12685874.1| Peptide chain release factor 2 [Mycobacterium rhodesiae JS60]
gi|353193456|gb|EHB58960.1| Peptide chain release factor 2 [Mycobacterium rhodesiae JS60]
Length = 371
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 41/62 (66%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
+I E D++ R SGPGGQ+V T++ V LTHIPTGIV+ C +S +N+ +A +L
Sbjct: 234 EIPEGDLRVDVYRSSGPGGQSVNTTDSAVRLTHIPTGIVVTCQNEKSQLQNKVSAMRVLQ 293
Query: 112 AQ 113
A+
Sbjct: 294 AK 295
>gi|262372379|ref|ZP_06065658.1| peptide chain release factor 1 [Acinetobacter junii SH205]
gi|262312404|gb|EEY93489.1| peptide chain release factor 1 [Acinetobacter junii SH205]
Length = 362
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 51/76 (67%), Gaps = 1/76 (1%)
Query: 40 LVSNIDIYSTIPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSL 99
++ +D+ +T+ +I+ D++ R SG GGQ + KT++ V +THIP+G+V++C + RS
Sbjct: 205 ILPEVDVDTTV-EINPADLRIDTYRASGAGGQHINKTDSAVRITHIPSGVVVECQEERSQ 263
Query: 100 SENRKTARELLVAQWD 115
+N+ A LLV++ +
Sbjct: 264 HKNKAKAMALLVSRLE 279
>gi|226952752|ref|ZP_03823216.1| peptide chain release factor 1 [Acinetobacter sp. ATCC 27244]
gi|294650077|ref|ZP_06727461.1| peptide chain release factor RF1 [Acinetobacter haemolyticus ATCC
19194]
gi|226836501|gb|EEH68884.1| peptide chain release factor 1 [Acinetobacter sp. ATCC 27244]
gi|292824028|gb|EFF82847.1| peptide chain release factor RF1 [Acinetobacter haemolyticus ATCC
19194]
Length = 362
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 51/76 (67%), Gaps = 1/76 (1%)
Query: 40 LVSNIDIYSTIPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSL 99
++ +D+ +T+ +I+ D++ R SG GGQ + KT++ V +THIP+G+V++C + RS
Sbjct: 205 ILPEVDVDTTV-EINPADLRIDTYRASGAGGQHINKTDSAVRITHIPSGVVVECQEERSQ 263
Query: 100 SENRKTARELLVAQWD 115
+N+ A LLV++ +
Sbjct: 264 HKNKAKAMALLVSRLE 279
>gi|441206141|ref|ZP_20972932.1| peptide chain release factor 2 [Mycobacterium smegmatis MKD8]
gi|440628689|gb|ELQ90485.1| peptide chain release factor 2 [Mycobacterium smegmatis MKD8]
Length = 368
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 40/61 (65%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
I E D++ R SGPGGQ+V T++ V LTHIPTGIV+ C +S +N+ +A +L A
Sbjct: 232 IPENDLRVDVYRSSGPGGQSVNTTDSAVRLTHIPTGIVVTCQNEKSQLQNKVSAMRVLQA 291
Query: 113 Q 113
+
Sbjct: 292 K 292
>gi|433630415|ref|YP_007264043.1| Peptide chain release factor RF-1 [Mycobacterium canettii CIPT
140070010]
gi|432162008|emb|CCK59369.1| Peptide chain release factor RF-1 [Mycobacterium canettii CIPT
140070010]
Length = 357
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 49/91 (53%), Gaps = 6/91 (6%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
+IDE D++ R SG GGQ V T++ V +TH+PTGIV+ C RS +N+ A ++L
Sbjct: 217 QIDESDLRIDVFRSSGKGGQGVNTTDSAVRITHLPTGIVVTCQNERSQLQNKTRALQVLA 276
Query: 112 AQWDVQVNGEDSLNA------QIRRIDEKRR 136
A+ + +A QIR +D R
Sbjct: 277 ARLQAMAEEQALADASADRASQIRTVDRSER 307
>gi|406036652|ref|ZP_11044016.1| peptide chain release factor 1 [Acinetobacter parvus DSM 16617 =
CIP 108168]
Length = 362
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 51/76 (67%), Gaps = 1/76 (1%)
Query: 40 LVSNIDIYSTIPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSL 99
++ +D+ +T+ +I+ D++ R SG GGQ + KT++ V +THIP+G+V++C + RS
Sbjct: 205 ILPEVDVDTTV-EINPADLRIDTYRASGAGGQHINKTDSAVRITHIPSGVVVECQEERSQ 263
Query: 100 SENRKTARELLVAQWD 115
+N+ A LLV++ +
Sbjct: 264 HKNKAKAMALLVSRLE 279
>gi|390563062|ref|ZP_10245205.1| Peptide chain release factor 2 (RF-2) [Nitrolancetus hollandicus
Lb]
gi|390172370|emb|CCF84525.1| Peptide chain release factor 2 (RF-2) [Nitrolancetus hollandicus
Lb]
Length = 344
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 63/133 (47%), Gaps = 28/133 (21%)
Query: 34 DGYHRNLVSNIDIYSTIPKIDE--------KDIQERFVRGSGPGGQAVAKTNNCVVLTHI 85
D HR + + +P+++E D++ R SG GGQ V KT++ V +TH+
Sbjct: 180 DAAHRRHTA-FALVEVLPQVEEGADVEIRDDDLRVDTYRSSGAGGQHVNKTDSAVRITHL 238
Query: 86 PTGIVIKCHQSRSLSENRKTARELLVAQWDVQVNGEDSLNAQIRRIDEK--RRATQEQKK 143
PTGIV+ C RS ++NR+TA ++L A R+ E R +EQ K
Sbjct: 239 PTGIVVTCQNERSQTQNRETAMKILRA-----------------RLTELAIREREEEQSK 281
Query: 144 RKLDALKKAWKER 156
K D + W R
Sbjct: 282 LKGDHVASGWGNR 294
>gi|374611917|ref|ZP_09684700.1| peptide chain release factor 2 [Mycobacterium tusciae JS617]
gi|373548561|gb|EHP75252.1| peptide chain release factor 2 [Mycobacterium tusciae JS617]
Length = 371
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 40/61 (65%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
I E D++ R SGPGGQ+V T++ V LTHIPTGIV+ C +S +N+ +A +L A
Sbjct: 235 IPEGDVRVDVYRSSGPGGQSVNTTDSAVRLTHIPTGIVVTCQNEKSQLQNKVSAMRVLQA 294
Query: 113 Q 113
+
Sbjct: 295 K 295
>gi|340794797|ref|YP_004760260.1| peptide chain release factor RF-1 [Corynebacterium variabile DSM
44702]
gi|340534707|gb|AEK37187.1| peptide chain release factor RF-1 [Corynebacterium variabile DSM
44702]
Length = 339
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 41/61 (67%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
+ID+KD++ R SG GGQ V T++ V +TH+PTGIV+ C + RS +N+ A ++L
Sbjct: 198 QIDDKDLRVDVYRSSGKGGQGVNTTDSAVRITHLPTGIVVTCQKERSQIQNKARAMQVLA 257
Query: 112 A 112
A
Sbjct: 258 A 258
>gi|254294252|ref|YP_003060275.1| hypothetical protein Hbal_1892 [Hirschia baltica ATCC 49814]
gi|254042783|gb|ACT59578.1| hypothetical protein Hbal_1892 [Hirschia baltica ATCC 49814]
Length = 370
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 40/61 (65%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
+I++KD++ R SG GGQ + KT++ + LTH PTGIV+ C RS +NR +A +L
Sbjct: 231 EIEDKDVRTDTYRASGSGGQHINKTDSAIRLTHAPTGIVVACQSDRSQHKNRASAWNMLR 290
Query: 112 A 112
A
Sbjct: 291 A 291
>gi|15608439|ref|NP_215815.1| Probable peptide chain release factor 1 PrfA (RF-1) [Mycobacterium
tuberculosis H37Rv]
gi|15840749|ref|NP_335786.1| peptide chain release factor 1 [Mycobacterium tuberculosis CDC1551]
gi|31792492|ref|NP_854985.1| peptide chain release factor 1 [Mycobacterium bovis AF2122/97]
gi|121637228|ref|YP_977451.1| peptide chain release factor 1 [Mycobacterium bovis BCG str.
Pasteur 1173P2]
gi|148661087|ref|YP_001282610.1| peptide chain release factor 1 [Mycobacterium tuberculosis H37Ra]
gi|148822517|ref|YP_001287271.1| peptide chain release factor 1 [Mycobacterium tuberculosis F11]
gi|167969626|ref|ZP_02551903.1| peptide chain release factor 1 [Mycobacterium tuberculosis H37Ra]
gi|224989703|ref|YP_002644390.1| peptide chain release factor 1 [Mycobacterium bovis BCG str. Tokyo
172]
gi|253799655|ref|YP_003032656.1| peptide chain release factor 1 [Mycobacterium tuberculosis KZN
1435]
gi|254231557|ref|ZP_04924884.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis C]
gi|254364196|ref|ZP_04980242.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
str. Haarlem]
gi|254550307|ref|ZP_05140754.1| peptide chain release factor 1 [Mycobacterium tuberculosis '98-R604
INH-RIF-EM']
gi|289442738|ref|ZP_06432482.1| peptide chain release factor 1 [Mycobacterium tuberculosis T46]
gi|289446894|ref|ZP_06436638.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
CPHL_A]
gi|289569311|ref|ZP_06449538.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
T17]
gi|289573962|ref|ZP_06454189.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
K85]
gi|289745045|ref|ZP_06504423.1| peptide chain release factor 1 [Mycobacterium tuberculosis 02_1987]
gi|289749853|ref|ZP_06509231.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
T92]
gi|289753376|ref|ZP_06512754.1| peptide chain release factor 1 [Mycobacterium tuberculosis EAS054]
gi|289757399|ref|ZP_06516777.1| peptide chain release factor 1 [Mycobacterium tuberculosis T85]
gi|289761454|ref|ZP_06520832.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis GM
1503]
gi|297633851|ref|ZP_06951631.1| peptide chain release factor 1 [Mycobacterium tuberculosis KZN
4207]
gi|297730838|ref|ZP_06959956.1| peptide chain release factor 1 [Mycobacterium tuberculosis KZN
R506]
gi|298524803|ref|ZP_07012212.1| peptide chain release factor 1 [Mycobacterium tuberculosis
94_M4241A]
gi|306775471|ref|ZP_07413808.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
SUMu001]
gi|306781618|ref|ZP_07419955.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
SUMu002]
gi|306784023|ref|ZP_07422345.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
SUMu003]
gi|306788386|ref|ZP_07426708.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
SUMu004]
gi|306792713|ref|ZP_07431015.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
SUMu005]
gi|306797119|ref|ZP_07435421.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
SUMu006]
gi|306802999|ref|ZP_07439667.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
SUMu008]
gi|306807189|ref|ZP_07443857.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
SUMu007]
gi|306967388|ref|ZP_07480049.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
SUMu009]
gi|306971580|ref|ZP_07484241.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
SUMu010]
gi|307079294|ref|ZP_07488464.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
SUMu011]
gi|307083863|ref|ZP_07492976.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
SUMu012]
gi|313658170|ref|ZP_07815050.1| peptide chain release factor 1 [Mycobacterium tuberculosis KZN
V2475]
gi|339631367|ref|YP_004723009.1| peptide chain release factor 1 [Mycobacterium africanum GM041182]
gi|340626315|ref|YP_004744767.1| putative peptide chain release factor 1 PRFA (RF-1) [Mycobacterium
canettii CIPT 140010059]
gi|375296896|ref|YP_005101163.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis KZN
4207]
gi|378771062|ref|YP_005170795.1| peptide chain release factor 1 [Mycobacterium bovis BCG str.
Mexico]
gi|385990727|ref|YP_005909025.1| peptide chain release factor 1 [Mycobacterium tuberculosis
CCDC5180]
gi|385994326|ref|YP_005912624.1| peptide chain release factor 1 [Mycobacterium tuberculosis
CCDC5079]
gi|385998083|ref|YP_005916381.1| peptide chain release factor 1 [Mycobacterium tuberculosis CTRI-2]
gi|386004288|ref|YP_005922567.1| peptide chain release factor 1 [Mycobacterium tuberculosis RGTB423]
gi|392385994|ref|YP_005307623.1| prfA [Mycobacterium tuberculosis UT205]
gi|392433106|ref|YP_006474150.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis KZN
605]
gi|397673141|ref|YP_006514676.1| peptide chain release factor 1 [Mycobacterium tuberculosis H37Rv]
gi|422812283|ref|ZP_16860671.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
CDC1551A]
gi|424803645|ref|ZP_18229076.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
W-148]
gi|424947040|ref|ZP_18362736.1| peptide chain release factor 1 [Mycobacterium tuberculosis
NCGM2209]
gi|449063370|ref|YP_007430453.1| peptide chain release factor 1 [Mycobacterium bovis BCG str. Korea
1168P]
gi|54039048|sp|P66017.1|RF1_MYCBO RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|54041593|sp|P66016.1|RF1_MYCTU RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|166223571|sp|A1KI87.1|RF1_MYCBP RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|166223574|sp|A5U1Z8.1|RF1_MYCTA RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|254790891|sp|C1AMU3.1|RF1_MYCBT RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|13880941|gb|AAK45600.1| peptide chain release factor 1 [Mycobacterium tuberculosis CDC1551]
gi|31618081|emb|CAD94192.1| PROBABLE PEPTIDE CHAIN RELEASE FACTOR 1 PRFA (RF-1) [Mycobacterium
bovis AF2122/97]
gi|121492875|emb|CAL71346.1| Probable peptide chain release factor 1 prfA [Mycobacterium bovis
BCG str. Pasteur 1173P2]
gi|124600616|gb|EAY59626.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis C]
gi|134149710|gb|EBA41755.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
str. Haarlem]
gi|148505239|gb|ABQ73048.1| peptide chain release factor 1 [Mycobacterium tuberculosis H37Ra]
gi|148721044|gb|ABR05669.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
F11]
gi|224772816|dbj|BAH25622.1| peptide chain release factor 1 [Mycobacterium bovis BCG str. Tokyo
172]
gi|253321158|gb|ACT25761.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis KZN
1435]
gi|289415657|gb|EFD12897.1| peptide chain release factor 1 [Mycobacterium tuberculosis T46]
gi|289419852|gb|EFD17053.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
CPHL_A]
gi|289538393|gb|EFD42971.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
K85]
gi|289543065|gb|EFD46713.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
T17]
gi|289685573|gb|EFD53061.1| peptide chain release factor 1 [Mycobacterium tuberculosis 02_1987]
gi|289690440|gb|EFD57869.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
T92]
gi|289693963|gb|EFD61392.1| peptide chain release factor 1 [Mycobacterium tuberculosis EAS054]
gi|289708960|gb|EFD72976.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis GM
1503]
gi|289712963|gb|EFD76975.1| peptide chain release factor 1 [Mycobacterium tuberculosis T85]
gi|298494597|gb|EFI29891.1| peptide chain release factor 1 [Mycobacterium tuberculosis
94_M4241A]
gi|308216019|gb|EFO75418.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
SUMu001]
gi|308325580|gb|EFP14431.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
SUMu002]
gi|308331256|gb|EFP20107.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
SUMu003]
gi|308335072|gb|EFP23923.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
SUMu004]
gi|308338880|gb|EFP27731.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
SUMu005]
gi|308342494|gb|EFP31345.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
SUMu006]
gi|308346428|gb|EFP35279.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
SUMu007]
gi|308350299|gb|EFP39150.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
SUMu008]
gi|308355000|gb|EFP43851.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
SUMu009]
gi|308358948|gb|EFP47799.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
SUMu010]
gi|308362830|gb|EFP51681.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
SUMu011]
gi|308366496|gb|EFP55347.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
SUMu012]
gi|323720256|gb|EGB29355.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
CDC1551A]
gi|326902921|gb|EGE49854.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
W-148]
gi|328459401|gb|AEB04824.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis KZN
4207]
gi|339294280|gb|AEJ46391.1| peptide chain release factor 1 [Mycobacterium tuberculosis
CCDC5079]
gi|339297920|gb|AEJ50030.1| peptide chain release factor 1 [Mycobacterium tuberculosis
CCDC5180]
gi|339330723|emb|CCC26393.1| putative peptide chain release factor 1 PRFA (RF-1) [Mycobacterium
africanum GM041182]
gi|340004505|emb|CCC43648.1| putative peptide chain release factor 1 PRFA (RF-1) [Mycobacterium
canettii CIPT 140010059]
gi|341601246|emb|CCC63919.1| probable peptide chain release factor 1 prfA [Mycobacterium bovis
BCG str. Moreau RDJ]
gi|344219129|gb|AEM99759.1| peptide chain release factor 1 [Mycobacterium tuberculosis CTRI-2]
gi|356593383|gb|AET18612.1| Peptide chain release factor 1 [Mycobacterium bovis BCG str.
Mexico]
gi|358231555|dbj|GAA45047.1| peptide chain release factor 1 [Mycobacterium tuberculosis
NCGM2209]
gi|378544545|emb|CCE36819.1| prfA [Mycobacterium tuberculosis UT205]
gi|379027521|dbj|BAL65254.1| peptide chain release factor 1 [Mycobacterium tuberculosis str.
Erdman = ATCC 35801]
gi|380724776|gb|AFE12571.1| peptide chain release factor 1 [Mycobacterium tuberculosis RGTB423]
gi|392054515|gb|AFM50073.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis KZN
605]
gi|395138046|gb|AFN49205.1| peptide chain release factor 1 [Mycobacterium tuberculosis H37Rv]
gi|440580775|emb|CCG11178.1| putative PEPTIDE CHAIN RELEASE FACTOR 1 PRFA (RF-1) [Mycobacterium
tuberculosis 7199-99]
gi|444894800|emb|CCP44056.1| Probable peptide chain release factor 1 PrfA (RF-1) [Mycobacterium
tuberculosis H37Rv]
gi|449031878|gb|AGE67305.1| peptide chain release factor 1 [Mycobacterium bovis BCG str. Korea
1168P]
Length = 357
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 49/91 (53%), Gaps = 6/91 (6%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
+IDE D++ R SG GGQ V T++ V +TH+PTGIV+ C RS +N+ A ++L
Sbjct: 217 QIDESDLRIDVFRSSGKGGQGVNTTDSAVRITHLPTGIVVTCQNERSQLQNKTRALQVLA 276
Query: 112 AQWDVQVNGEDSLNA------QIRRIDEKRR 136
A+ + +A QIR +D R
Sbjct: 277 ARLQAMAEEQALADASADRASQIRTVDRSER 307
>gi|425744084|ref|ZP_18862146.1| peptide chain release factor 1 [Acinetobacter baumannii WC-323]
gi|425492033|gb|EKU58305.1| peptide chain release factor 1 [Acinetobacter baumannii WC-323]
Length = 362
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 51/76 (67%), Gaps = 1/76 (1%)
Query: 40 LVSNIDIYSTIPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSL 99
++ +D+ +T+ +I+ D++ R SG GGQ + KT++ V +THIP+G+V++C + RS
Sbjct: 205 ILPEVDVDTTV-EINPADLRIDTYRASGAGGQHINKTDSAVRITHIPSGVVVECQEERSQ 263
Query: 100 SENRKTARELLVAQWD 115
+N+ A LLV++ +
Sbjct: 264 HKNKAKAMALLVSRLE 279
>gi|433626400|ref|YP_007260029.1| Peptide chain release factor RF-1 [Mycobacterium canettii CIPT
140060008]
gi|432154006|emb|CCK51233.1| Peptide chain release factor RF-1 [Mycobacterium canettii CIPT
140060008]
Length = 357
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 49/91 (53%), Gaps = 6/91 (6%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
+IDE D++ R SG GGQ V T++ V +TH+PTGIV+ C RS +N+ A ++L
Sbjct: 217 QIDESDLRIDVFRSSGKGGQGVNTTDSAVRITHLPTGIVVTCQNERSQLQNKTRALQVLA 276
Query: 112 AQWDVQVNGEDSLNA------QIRRIDEKRR 136
A+ + +A QIR +D R
Sbjct: 277 ARLQAMAEEQALADASADRASQIRTVDRSER 307
>gi|154502573|ref|ZP_02039633.1| hypothetical protein RUMGNA_00386 [Ruminococcus gnavus ATCC 29149]
gi|153796765|gb|EDN79185.1| peptide chain release factor 1 [Ruminococcus gnavus ATCC 29149]
Length = 356
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
IDEKDI+ +R SG GGQ V T++ V LTH PTGIVI +S +N++ A LL +
Sbjct: 215 IDEKDIRIDVMRASGNGGQCVNTTDSAVRLTHYPTGIVIYSQTEKSQLQNKEKAFRLLRS 274
Query: 113 Q-WDVQVNGEDSLNAQIRR 130
+ +++++ + S A+ RR
Sbjct: 275 KLYELELEKQQSAEAEARR 293
>gi|429743488|ref|ZP_19277042.1| peptide chain release factor 2 [Neisseria sp. oral taxon 020 str.
F0370]
gi|429165271|gb|EKY07336.1| peptide chain release factor 2 [Neisseria sp. oral taxon 020 str.
F0370]
Length = 367
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 68/133 (51%), Gaps = 19/133 (14%)
Query: 20 LLESQVTITRELRNDGYHRNLVSNIDIYSTI--PKIDEK--------DIQERFVRGSGPG 69
LL ++ + R +R + N + S P++D+ D++ R SG G
Sbjct: 193 LLRTETGVHRLVRYSPFDSNNKRHTSFASVFVYPEVDDSFEVEINPADLRTDTYRASGAG 252
Query: 70 GQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVAQWDVQVNGEDSLNAQIR 129
GQ + KT++ V +THIPTGIV++ SRS ENR+ E+L ++ ++R
Sbjct: 253 GQHINKTDSAVRITHIPTGIVVQSQSSRSQHENRRIVMEMLRSKL---------FELEMR 303
Query: 130 RIDEKRRATQEQK 142
+ +E+++A +E K
Sbjct: 304 KRNEEKQALEEGK 316
>gi|365155864|ref|ZP_09352211.1| peptide chain release factor 1 [Bacillus smithii 7_3_47FAA]
gi|363627942|gb|EHL78770.1| peptide chain release factor 1 [Bacillus smithii 7_3_47FAA]
Length = 356
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 41/61 (67%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
+I+EKDI+ SGPGGQ+V T + V LTHIPTGIV+ C +S +N++ A ++L
Sbjct: 214 EINEKDIRVDTFASSGPGGQSVNTTMSAVRLTHIPTGIVVSCQDEKSQIKNKEKAMKVLR 273
Query: 112 A 112
A
Sbjct: 274 A 274
>gi|336431245|ref|ZP_08611099.1| peptide chain release factor 1 [Lachnospiraceae bacterium
2_1_58FAA]
gi|336020167|gb|EGN49884.1| peptide chain release factor 1 [Lachnospiraceae bacterium
2_1_58FAA]
Length = 356
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
IDEKDI+ +R SG GGQ V T++ V LTH PTGIVI +S +N++ A LL +
Sbjct: 215 IDEKDIRIDVMRASGNGGQCVNTTDSAVRLTHYPTGIVIYSQTEKSQLQNKEKAFRLLRS 274
Query: 113 Q-WDVQVNGEDSLNAQIRR 130
+ +++++ + S A+ RR
Sbjct: 275 KLYELELEKQQSAEAEARR 293
>gi|221633612|ref|YP_002522838.1| peptide chain release factor 2, programmed frameshift
[Thermomicrobium roseum DSM 5159]
gi|254790922|sp|B9L0E3.1|RF2_THERP RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|221155396|gb|ACM04523.1| peptide chain release factor 2, programmed frameshift
[Thermomicrobium roseum DSM 5159]
Length = 374
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 41/61 (67%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
+I E+DI+ R SG GGQ V KT + V +TH+PTGIV+ C RS +NR+TA ++L
Sbjct: 229 EIREEDIRIDTFRASGHGGQHVNKTESAVRITHLPTGIVVTCQNERSQIQNRETAMKILK 288
Query: 112 A 112
A
Sbjct: 289 A 289
>gi|433641453|ref|YP_007287212.1| Peptide chain release factor RF-1 [Mycobacterium canettii CIPT
140070008]
gi|432158001|emb|CCK55284.1| Peptide chain release factor RF-1 [Mycobacterium canettii CIPT
140070008]
Length = 357
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 49/91 (53%), Gaps = 6/91 (6%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
+IDE D++ R SG GGQ V T++ V +TH+PTGIV+ C RS +N+ A ++L
Sbjct: 217 QIDESDLRIDVFRSSGKGGQGVNTTDSAVRITHLPTGIVVTCQNERSQLQNKTRALQVLA 276
Query: 112 AQWDVQVNGEDSLNA------QIRRIDEKRR 136
A+ + +A QIR +D R
Sbjct: 277 ARLQAMAEEQALADASADRASQIRTVDRSER 307
>gi|296114415|ref|ZP_06833069.1| peptide chain release factor 2 [Gluconacetobacter hansenii ATCC
23769]
gi|295979176|gb|EFG85900.1| peptide chain release factor 2 [Gluconacetobacter hansenii ATCC
23769]
Length = 322
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 37/60 (61%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
I+E D++ R SG GGQ V KT + + +THIPTGIV+ C RS NR TA +L A
Sbjct: 178 INEADLRVDTFRASGAGGQHVNKTESAIRITHIPTGIVVACQTDRSQHRNRATAMAMLKA 237
>gi|227486641|ref|ZP_03916957.1| peptide chain release factor RF2 [Anaerococcus lactolyticus ATCC
51172]
gi|227235353|gb|EEI85368.1| peptide chain release factor RF2 [Anaerococcus lactolyticus ATCC
51172]
Length = 329
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 47/78 (60%), Gaps = 5/78 (6%)
Query: 41 VSNIDIY-----STIPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQ 95
S++D++ T +ID D++ R SG GGQ V KT++ V +THIPTG+V
Sbjct: 178 FSSVDVFPELDEDTSIEIDPSDLRIDTYRASGAGGQHVNKTDSAVRITHIPTGVVATSQA 237
Query: 96 SRSLSENRKTARELLVAQ 113
RS +NR+TA LL+++
Sbjct: 238 ERSQMQNRETAMNLLISK 255
>gi|218779410|ref|YP_002430728.1| peptide chain release factor 2 [Desulfatibacillum alkenivorans
AK-01]
gi|218760794|gb|ACL03260.1| peptide chain release factor 2 [Desulfatibacillum alkenivorans
AK-01]
Length = 327
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 51/87 (58%), Gaps = 5/87 (5%)
Query: 31 LRNDGYHRNLVSNIDIYSTIPK-----IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHI 85
++G + +++ +Y I + ++EKD++ R SG GGQ V KT++ V + HI
Sbjct: 167 FNSNGKRQTSFASVAVYPEIDQEIVVDVNEKDLRIDVFRASGAGGQHVNKTSSAVRILHI 226
Query: 86 PTGIVIKCHQSRSLSENRKTARELLVA 112
PTGIV++C Q +S NR A ++L A
Sbjct: 227 PTGIVVQCQQEKSQHRNRDLAMKVLKA 253
>gi|402757263|ref|ZP_10859519.1| peptide chain release factor 1 [Acinetobacter sp. NCTC 7422]
Length = 362
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 51/76 (67%), Gaps = 1/76 (1%)
Query: 40 LVSNIDIYSTIPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSL 99
++ +D+ +T+ +I+ D++ R SG GGQ + KT++ V +THIP+G+V++C + RS
Sbjct: 205 ILPEVDVDTTV-EINPADLRIDTYRASGAGGQHINKTDSAVRITHIPSGVVVECQEERSQ 263
Query: 100 SENRKTARELLVAQWD 115
+N+ A LLV++ +
Sbjct: 264 HKNKAKAMALLVSRLE 279
>gi|359408232|ref|ZP_09200704.1| peptide chain release factor 2 [SAR116 cluster alpha
proteobacterium HIMB100]
gi|356676989|gb|EHI49338.1| peptide chain release factor 2 [SAR116 cluster alpha
proteobacterium HIMB100]
Length = 369
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 43/70 (61%), Gaps = 5/70 (7%)
Query: 43 NIDIYSTIPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSEN 102
NIDI +++EKD++ R SG GGQ V T++ + +THIPT IV++C RS N
Sbjct: 227 NIDI-----QLEEKDLRVDTYRASGAGGQHVNTTDSAIRITHIPTNIVVQCQSDRSQHRN 281
Query: 103 RKTARELLVA 112
R TA +L A
Sbjct: 282 RATALNMLKA 291
>gi|408829971|ref|ZP_11214861.1| peptide chain release factor 2 [Streptomyces somaliensis DSM 40738]
Length = 368
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 64/123 (52%), Gaps = 25/123 (20%)
Query: 33 NDGYHRNLVSNIDIYSTIPKID-----EKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 87
N G + + +++ + + D E D++ R SGPGGQ+V T++ V +THIPT
Sbjct: 208 NQGRRQTSFAGVEVLPVVEQTDHIEIPENDLRIDVYRSSGPGGQSVNTTDSAVRITHIPT 267
Query: 88 GIVIKCHQSRSLSENRKTARELLVAQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKLD 147
G+V+ C +S +N+ +A +L A R+ E++R ++++ K+D
Sbjct: 268 GVVVSCQNEKSQIQNKASAMRVLQA-----------------RLLERQR---QEERAKMD 307
Query: 148 ALK 150
ALK
Sbjct: 308 ALK 310
>gi|363899902|ref|ZP_09326408.1| peptide chain release factor 1 [Oribacterium sp. ACB1]
gi|395210304|ref|ZP_10399224.1| peptide chain release factor 1 [Oribacterium sp. ACB8]
gi|361956756|gb|EHL10068.1| peptide chain release factor 1 [Oribacterium sp. ACB1]
gi|394704594|gb|EJF12132.1| peptide chain release factor 1 [Oribacterium sp. ACB8]
Length = 358
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 51/80 (63%), Gaps = 1/80 (1%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
+I+ D++ R SG GGQ + KT++ V L H+PTG+V +C + RS +NR+ A LL
Sbjct: 214 EINPADVKMEVFRSSGAGGQHINKTSSAVRLIHVPTGMVAECQEERSQVQNREKAMRLLR 273
Query: 112 AQ-WDVQVNGEDSLNAQIRR 130
A+ +++++ + NA+ +R
Sbjct: 274 ARLYEIELEKQQKENAEEKR 293
>gi|262199727|ref|YP_003270936.1| peptide chain release factor 1 [Haliangium ochraceum DSM 14365]
gi|262083074|gb|ACY19043.1| peptide chain release factor 1 [Haliangium ochraceum DSM 14365]
Length = 363
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 40/59 (67%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELL 110
K++EKD++ R SGPGGQ+V T++ V +TH+PTGIV+ C +S +N+ A +L
Sbjct: 220 KLEEKDLRIDVYRSSGPGGQSVNTTDSAVRVTHLPTGIVVICQDEKSQHKNKAKAMRIL 278
>gi|239828604|ref|YP_002951228.1| peptide chain release factor 1 [Geobacillus sp. WCH70]
gi|259585224|sp|C5D9N4.1|RF1_GEOSW RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|239808897|gb|ACS25962.1| peptide chain release factor 1 [Geobacillus sp. WCH70]
Length = 358
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 41/61 (67%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
+I+EKDI+ SGPGGQ+V T + V LTHIPTGIV+ C +S +N++ A ++L
Sbjct: 214 EINEKDIRVDTFASSGPGGQSVNTTMSAVRLTHIPTGIVVTCQDEKSQIKNKEKAMKVLR 273
Query: 112 A 112
A
Sbjct: 274 A 274
>gi|152997601|ref|YP_001342436.1| peptide chain release factor 1 [Marinomonas sp. MWYL1]
gi|189039978|sp|A6W1C2.1|RF1_MARMS RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|150838525|gb|ABR72501.1| peptide chain release factor 1 [Marinomonas sp. MWYL1]
Length = 362
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 44/73 (60%), Gaps = 8/73 (10%)
Query: 48 STIPKIDE--------KDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSL 99
+ +P++DE D++ R SG GGQ V KT++ + LTHIPTG+V++C + RS
Sbjct: 206 AVMPEMDEVDDIIINKSDLRIDTFRASGAGGQHVNKTDSAIRLTHIPTGVVVECQEERSQ 265
Query: 100 SENRKTARELLVA 112
+NR A LL +
Sbjct: 266 HKNRAKAMSLLAS 278
>gi|90581727|ref|ZP_01237514.1| peptide chain release factor 1 [Photobacterium angustum S14]
gi|90437081|gb|EAS62285.1| peptide chain release factor 1 [Vibrio angustum S14]
Length = 362
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 53/99 (53%), Gaps = 13/99 (13%)
Query: 48 STIPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTAR 107
+ IP+I+ D++ R SG GGQ V T++ + +TH+PTGIV++C RS +N+ A
Sbjct: 214 AEIPEINAGDLKIDTFRASGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKAM 273
Query: 108 ELLVAQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKL 146
+L A+ I+ +EKR A + +R L
Sbjct: 274 SVLAARI-------------IKAEEEKRHAEEASTRRNL 299
>gi|433634363|ref|YP_007267990.1| Peptide chain release factor RF-1 [Mycobacterium canettii CIPT
140070017]
gi|432165956|emb|CCK63443.1| Peptide chain release factor RF-1 [Mycobacterium canettii CIPT
140070017]
Length = 357
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 49/91 (53%), Gaps = 6/91 (6%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
+IDE D++ R SG GGQ V T++ V +TH+PTGIV+ C RS +N+ A ++L
Sbjct: 217 QIDESDLRIDVFRSSGKGGQGVNTTDSAVRITHLPTGIVVTCQNERSQLQNKTRALQVLA 276
Query: 112 AQWDVQVNGEDSLNA------QIRRIDEKRR 136
A+ + +A QIR +D R
Sbjct: 277 ARLQAMAEEQALADASADRASQIRTVDRSER 307
>gi|415942784|ref|ZP_11555980.1| Peptide chain release factor 1 [Herbaspirillum frisingense GSF30]
gi|407758794|gb|EKF68568.1| Peptide chain release factor 1 [Herbaspirillum frisingense GSF30]
Length = 355
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 49/79 (62%), Gaps = 1/79 (1%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
I+ DI+ R SG GGQ + KT++ V +TH+PTGIV++C RS +N+ A ++L A
Sbjct: 213 INPADIRIDTYRASGAGGQHINKTDSAVRITHLPTGIVVECQDDRSQHKNKAQAMKVLAA 272
Query: 113 QW-DVQVNGEDSLNAQIRR 130
+ DVQ+ + S A R+
Sbjct: 273 RIKDVQLREQQSKEAATRK 291
>gi|319788960|ref|YP_004090275.1| peptide chain release factor 1 [Ruminococcus albus 7]
gi|315450827|gb|ADU24389.1| peptide chain release factor 1 [Ruminococcus albus 7]
Length = 359
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 45/74 (60%), Gaps = 8/74 (10%)
Query: 48 STIPKID--------EKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSL 99
+ +P++D EK+I+ R SG GGQ + KT++ V L HIPTG V++C RS
Sbjct: 204 AVLPEVDDVELEINEEKEIKMEVFRSSGAGGQHINKTSSAVRLIHIPTGTVVECQNERSQ 263
Query: 100 SENRKTARELLVAQ 113
+NR+ A ++L A+
Sbjct: 264 FQNREKALKMLKAK 277
>gi|365960564|ref|YP_004942131.1| peptide chain release factor-like protein [Flavobacterium columnare
ATCC 49512]
gi|365737245|gb|AEW86338.1| peptide chain release factor-like protein [Flavobacterium columnare
ATCC 49512]
Length = 249
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 48/82 (58%), Gaps = 4/82 (4%)
Query: 36 YHRNLVSNIDIY----STIPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVI 91
+H+ I I+ + +P EKDIQ + +R SG GGQ V K ++ + TH+PTGI +
Sbjct: 105 FHKRKNWFIGIFEVPLTILPTFSEKDIQYQAMRSSGAGGQHVNKVSSAIRATHLPTGISV 164
Query: 92 KCHQSRSLSENRKTARELLVAQ 113
SRS +N+K A E L+A+
Sbjct: 165 VSMDSRSQHQNKKLATERLLAK 186
>gi|312112637|ref|YP_003990953.1| peptide chain release factor 1 [Geobacillus sp. Y4.1MC1]
gi|423721596|ref|ZP_17695778.1| peptide chain release factor 1 [Geobacillus thermoglucosidans
TNO-09.020]
gi|311217738|gb|ADP76342.1| peptide chain release factor 1 [Geobacillus sp. Y4.1MC1]
gi|383365399|gb|EID42695.1| peptide chain release factor 1 [Geobacillus thermoglucosidans
TNO-09.020]
Length = 358
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 41/61 (67%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
+I+EKDI+ SGPGGQ+V T + V LTHIPTGIV+ C +S +N++ A ++L
Sbjct: 214 EINEKDIRVDTFASSGPGGQSVNTTMSAVRLTHIPTGIVVTCQDEKSQIKNKEKAMKVLR 273
Query: 112 A 112
A
Sbjct: 274 A 274
>gi|87122989|ref|ZP_01078849.1| peptide chain release factor 1 [Marinomonas sp. MED121]
gi|86161726|gb|EAQ63031.1| peptide chain release factor 1 [Marinomonas sp. MED121]
Length = 363
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 43/73 (58%), Gaps = 8/73 (10%)
Query: 48 STIPKIDEKDIQE--------RFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSL 99
+ +P++DE+D E R SG GGQ V KT++ + LTHIPTG+V++C RS
Sbjct: 206 AIMPEMDEQDAIEINKADLRVDTFRASGAGGQHVNKTDSAIRLTHIPTGVVVECQDERSQ 265
Query: 100 SENRKTARELLVA 112
+NR A LL +
Sbjct: 266 HKNRAKAMALLAS 278
>gi|296138963|ref|YP_003646206.1| peptide chain release factor 1 [Tsukamurella paurometabola DSM
20162]
gi|296027097|gb|ADG77867.1| peptide chain release factor 1 [Tsukamurella paurometabola DSM
20162]
Length = 362
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 49/91 (53%), Gaps = 6/91 (6%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
+IDE D++ R SG GGQ V T++ V +TH+PT IV+ C RS +N+ A ++L
Sbjct: 222 QIDESDLRIDVYRSSGKGGQGVNTTDSAVRITHLPTNIVVTCQNERSQLQNKARAMQVLA 281
Query: 112 AQWDV------QVNGEDSLNAQIRRIDEKRR 136
A+ + DS AQIR +D R
Sbjct: 282 ARLQALREEEAEAAASDSRAAQIRTVDRSER 312
>gi|302654387|ref|XP_003019001.1| peptidyl-tRNA hydrolase domain protein [Trichophyton verrucosum HKI
0517]
gi|291182691|gb|EFE38356.1| peptidyl-tRNA hydrolase domain protein [Trichophyton verrucosum HKI
0517]
Length = 212
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 47/94 (50%), Gaps = 21/94 (22%)
Query: 51 PKIDEKDIQERFVRGSGPGGQ---------------------AVAKTNNCVVLTHIPTGI 89
P +DE +I +++GSGPGGQ + ++ V L HIPT
Sbjct: 47 PTLDESEITGTYLKGSGPGGQKIVSQSLIPRSLVALHKLAVSPIGMISSAVQLIHIPTNT 106
Query: 90 VIKCHQSRSLSENRKTARELLVAQWDVQVNGEDS 123
V+KC +RS S+NRK A+ +L + ++ GE S
Sbjct: 107 VVKCQATRSQSQNRKIAKRILAEKIELLEKGEQS 140
>gi|26553517|ref|NP_757451.1| peptide chain release factor 1 [Mycoplasma penetrans HF-2]
gi|32171558|sp|Q8EWY5.1|RF1_MYCPE RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|26453523|dbj|BAC43855.1| peptide chain release factor 1 [Mycoplasma penetrans HF-2]
Length = 359
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
I+ D++ R SG GGQ + KT + V +THIPTGI + C + +S ENR+TA ++L A
Sbjct: 218 INNSDLKIDTYRASGAGGQHINKTESAVRITHIPTGIFVACQEGKSQIENRETAMKMLRA 277
Query: 113 Q-WD 115
+ W+
Sbjct: 278 KLWE 281
>gi|194290876|ref|YP_002006783.1| peptide chain release factor 1 [Cupriavidus taiwanensis LMG 19424]
gi|238692779|sp|B3R722.1|RF1_CUPTR RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|193224711|emb|CAQ70722.1| peptide chain release factor RF-1 [Cupriavidus taiwanensis LMG
19424]
Length = 360
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
+I+ D++ R SG GGQ V KT++ V LTH+PTGIV++C RS N+ A ++L
Sbjct: 216 EINPADLRIDTFRASGAGGQHVNKTDSAVRLTHLPTGIVVECQDDRSQHRNKDKAMKVLA 275
Query: 112 AQW-DVQVNGEDSLNAQIRR 130
A+ D+Q + A RR
Sbjct: 276 ARIKDMQTRAAQAREASTRR 295
>gi|421747766|ref|ZP_16185443.1| peptide chain release factor 1 [Cupriavidus necator HPC(L)]
gi|409773584|gb|EKN55353.1| peptide chain release factor 1 [Cupriavidus necator HPC(L)]
Length = 360
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
+I+ D++ R SG GGQ + KT++ V LTH+PTGIV++C RS N+ A ++L
Sbjct: 216 EINPGDLRVDTFRASGAGGQHINKTDSAVRLTHLPTGIVVECQDDRSQHRNKDKAMKVLA 275
Query: 112 AQW-DVQVNGEDSLNAQIRR 130
A+ D+Q+ + A RR
Sbjct: 276 ARLKDMQLRAAQAKEATTRR 295
>gi|325002820|ref|ZP_08123932.1| peptide chain release factor 1 [Pseudonocardia sp. P1]
Length = 358
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 41/61 (67%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
+IDEKDI+ R SG GGQ+V T++ V +TH+P+GIV+ C RS +N+ A ++L
Sbjct: 214 EIDEKDIRVDVFRASGHGGQSVNTTDSAVRITHLPSGIVVSCQNERSQLQNKARAMDVLR 273
Query: 112 A 112
A
Sbjct: 274 A 274
>gi|261188569|ref|XP_002620699.1| peptide chain release factor 1 [Ajellomyces dermatitidis SLH14081]
gi|239593183|gb|EEQ75764.1| peptide chain release factor 1 [Ajellomyces dermatitidis SLH14081]
gi|239613247|gb|EEQ90234.1| peptide chain release factor 1 [Ajellomyces dermatitidis ER-3]
Length = 438
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 59/122 (48%), Gaps = 17/122 (13%)
Query: 25 VTITRELRNDGYHRNLVSNIDIYSTIPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTH 84
V I N+G + N D ++ ID +++ +R G GGQ V KT + + LTH
Sbjct: 247 VVILPSFPNNGEEGDSEMNFDDPNSDYYIDPQEVNVEKMRAGGAGGQHVNKTESAIRLTH 306
Query: 85 IPTGIVIKCHQSRSLSENRKTARELLVAQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKR 144
IPTGIV+ SRS ENR+ A LL A RI ++RR +E++
Sbjct: 307 IPTGIVVGMQDSRSQHENRRKAWHLLRA-----------------RIAQQRREAREEEMV 349
Query: 145 KL 146
KL
Sbjct: 350 KL 351
>gi|392946491|ref|ZP_10312133.1| peptide chain release factor 1 [Frankia sp. QA3]
gi|392289785|gb|EIV95809.1| peptide chain release factor 1 [Frankia sp. QA3]
Length = 356
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 52/91 (57%), Gaps = 6/91 (6%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKT------ 105
+ID D++ R SGPGGQ+V T++ V +TH+PTG+V+ C +S +N+++
Sbjct: 214 EIDPNDLRIDVFRSSGPGGQSVNTTDSAVRITHVPTGLVVSCQNEKSQLQNKESALRILR 273
Query: 106 ARELLVAQWDVQVNGEDSLNAQIRRIDEKRR 136
AR L VA+ + + +Q+R +D R
Sbjct: 274 ARLLGVAREKAESEASMARASQVRTVDRSER 304
>gi|418406857|ref|ZP_12980176.1| peptide chain release factor 2 [Agrobacterium tumefaciens 5A]
gi|358007350|gb|EHJ99673.1| peptide chain release factor 2 [Agrobacterium tumefaciens 5A]
Length = 322
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 49/77 (63%), Gaps = 2/77 (2%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
I+E D + R SG GGQ V T++ V +THIPTGI + C Q RS +NR A ++L A
Sbjct: 178 INESDCRIDTYRSSGAGGQHVNTTDSAVRITHIPTGIAVACQQERSQHKNRAKAWDMLRA 237
Query: 113 Q-WDVQVNG-EDSLNAQ 127
+ ++V++ ED+ NAQ
Sbjct: 238 RLYEVELQKREDAANAQ 254
>gi|325292702|ref|YP_004278566.1| peptide chain release factor 2 [Agrobacterium sp. H13-3]
gi|325060555|gb|ADY64246.1| peptide chain release factor 2 [Agrobacterium sp. H13-3]
Length = 342
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 49/77 (63%), Gaps = 2/77 (2%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
I+E D + R SG GGQ V T++ V +THIPTGI + C Q RS +NR A ++L A
Sbjct: 198 INESDCRIDTYRSSGAGGQHVNTTDSAVRITHIPTGIAVACQQERSQHKNRAKAWDMLRA 257
Query: 113 Q-WDVQVNG-EDSLNAQ 127
+ ++V++ ED+ NAQ
Sbjct: 258 RLYEVELQKREDAANAQ 274
>gi|363898293|ref|ZP_09324827.1| peptide chain release factor 1 [Oribacterium sp. ACB7]
gi|361956029|gb|EHL09348.1| peptide chain release factor 1 [Oribacterium sp. ACB7]
Length = 358
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 51/80 (63%), Gaps = 1/80 (1%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
+I+ D++ R SG GGQ + KT++ V L H+PTG+V +C + RS +NR+ A LL
Sbjct: 214 EINPADVKMEVFRSSGAGGQHINKTSSAVRLIHVPTGMVAECQEERSQVQNREKAMRLLR 273
Query: 112 AQ-WDVQVNGEDSLNAQIRR 130
A+ +++++ + NA+ +R
Sbjct: 274 ARLYEIELEKQQKENAEEKR 293
>gi|403049123|ref|ZP_10903607.1| peptide chain release factor 1 [SAR86 cluster bacterium SAR86D]
Length = 361
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 42/65 (64%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
ID+ D++ R SG GGQ V KT++ V LTHIP+G+V++C RS +N++ A LL +
Sbjct: 219 IDKNDLRVDTFRASGAGGQHVNKTDSAVRLTHIPSGLVVECQDGRSQHKNKEKALSLLAS 278
Query: 113 QWDVQ 117
+ Q
Sbjct: 279 KLKQQ 283
>gi|327357433|gb|EGE86290.1| peptide chain release factor 1 [Ajellomyces dermatitidis ATCC
18188]
Length = 438
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 59/122 (48%), Gaps = 17/122 (13%)
Query: 25 VTITRELRNDGYHRNLVSNIDIYSTIPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTH 84
V I N+G + N D ++ ID +++ +R G GGQ V KT + + LTH
Sbjct: 247 VVILPSFPNNGEEGDSEMNFDDPNSDYYIDPQEVNVEKMRAGGAGGQHVNKTESAIRLTH 306
Query: 85 IPTGIVIKCHQSRSLSENRKTARELLVAQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKR 144
IPTGIV+ SRS ENR+ A LL A RI ++RR +E++
Sbjct: 307 IPTGIVVGMQDSRSQHENRRKAWHLLRA-----------------RIAQQRREAREEEMV 349
Query: 145 KL 146
KL
Sbjct: 350 KL 351
>gi|452959328|gb|EME64668.1| peptide chain release factor RF-1 [Amycolatopsis decaplanina DSM
44594]
Length = 357
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 40/61 (65%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
+ID D++ R SGPGGQ+V T++ V +THIPTG+V+ C +S +NR A ++L
Sbjct: 215 EIDPNDLRIDVYRSSGPGGQSVNTTDSAVRITHIPTGVVVSCQNEKSQIQNRARALQVLQ 274
Query: 112 A 112
A
Sbjct: 275 A 275
>gi|428172636|gb|EKX41543.1| hypothetical protein GUITHDRAFT_141811 [Guillardia theta CCMP2712]
Length = 215
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 39/59 (66%)
Query: 57 DIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVAQWD 115
DIQE+FVRGSG GGQ + KT + V +THIPTGI + C R S NR A LV++ +
Sbjct: 109 DIQEQFVRGSGRGGQKMNKTASKVRITHIPTGIQVACQTEREQSINRFLAMRELVSRLE 167
>gi|329120730|ref|ZP_08249392.1| peptide chain release factor RF2 [Neisseria bacilliformis ATCC
BAA-1200]
gi|327460527|gb|EGF06863.1| peptide chain release factor RF2 [Neisseria bacilliformis ATCC
BAA-1200]
Length = 417
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 68/133 (51%), Gaps = 19/133 (14%)
Query: 20 LLESQVTITRELRNDGYHRNLVSNIDIYSTI--PKIDEK--------DIQERFVRGSGPG 69
LL ++ + R +R + N + S P++D+ D++ R SG G
Sbjct: 243 LLRTETGVHRLVRYSPFDSNNKRHTSFASVFVYPEVDDSFEIEINPADLRTDTYRASGAG 302
Query: 70 GQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVAQWDVQVNGEDSLNAQIR 129
GQ + KT++ V +THIPTGIV++ SRS ENR+ E+L ++ ++R
Sbjct: 303 GQHINKTDSAVRITHIPTGIVVQSQSSRSQHENRRIVMEMLRSKL---------FELEMR 353
Query: 130 RIDEKRRATQEQK 142
+ +E+++A +E K
Sbjct: 354 KRNEEKQALEEGK 366
>gi|336237099|ref|YP_004589715.1| peptide chain release factor 1 [Geobacillus thermoglucosidasius
C56-YS93]
gi|335363954|gb|AEH49634.1| Peptide chain release factor 1 [Geobacillus thermoglucosidasius
C56-YS93]
Length = 358
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 41/61 (67%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
+I+EKDI+ SGPGGQ+V T + V LTHIPTGIV+ C +S +N++ A ++L
Sbjct: 214 EINEKDIRVDTFASSGPGGQSVNTTMSAVRLTHIPTGIVVTCQDEKSQIKNKEKAMKVLR 273
Query: 112 A 112
A
Sbjct: 274 A 274
>gi|85859385|ref|YP_461587.1| peptide chain release factor 2 [Syntrophus aciditrophicus SB]
gi|85722476|gb|ABC77419.1| bacterial peptide Chain Release Factor 2 (RF-2) [Syntrophus
aciditrophicus SB]
Length = 279
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 41/61 (67%)
Query: 50 IPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTAREL 109
+ +IDEKD++ R +G GGQ V KT++ V +TH+PTGIV++C RS +N+ A +
Sbjct: 146 VVEIDEKDLRIDTYRSTGAGGQHVNKTDSAVRITHMPTGIVVQCQNERSQHKNKAMAMKY 205
Query: 110 L 110
L
Sbjct: 206 L 206
>gi|157363244|ref|YP_001470011.1| peptide chain release factor 1 [Thermotoga lettingae TMO]
gi|157313848|gb|ABV32947.1| peptide chain release factor 1 [Thermotoga lettingae TMO]
Length = 347
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 57/89 (64%), Gaps = 9/89 (10%)
Query: 41 VSNIDIYSTIPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLS 100
VS+++I+ ID KD++ + SG GGQ V KT + V +TH+PTGI++ C RS
Sbjct: 202 VSDVEIH-----IDPKDLKIDTFKASGHGGQYVNKTESAVRITHLPTGIIVSCQSERSQH 256
Query: 101 ENRKTARELLVAQ-WDVQVNGEDSLNAQI 128
+NR+ A +L A+ ++++ ++ +N+Q+
Sbjct: 257 QNRERALVILRAKLYEIE---QEKINSQL 282
>gi|86742401|ref|YP_482801.1| peptide chain release factor 1 [Frankia sp. CcI3]
gi|119361540|sp|Q2J6M0.1|RF1_FRASC RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|86569263|gb|ABD13072.1| bacterial peptide chain release factor 1 (bRF-1) [Frankia sp. CcI3]
Length = 357
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 52/91 (57%), Gaps = 6/91 (6%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTA----R 107
+ID D++ R SGPGGQ+V T++ V +THIPTG+V+ C +S +N+++A R
Sbjct: 215 EIDPNDLRIDVFRSSGPGGQSVNTTDSAVRITHIPTGVVVSCQNEKSQLQNKESALRILR 274
Query: 108 ELLVAQWDVQVNGEDSL--NAQIRRIDEKRR 136
L+ + E SL +Q+R +D R
Sbjct: 275 ARLLGAAREKAESEASLARASQVRTVDRSER 305
>gi|453362485|dbj|GAC81610.1| peptide chain release factor 1 [Gordonia malaquae NBRC 108250]
Length = 357
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 39/61 (63%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
+IDE D++ R SG GGQ V T++ V LTH+PTG+V+ C RS +N+ A ++L
Sbjct: 218 QIDESDLRVDVYRSSGKGGQGVNTTDSAVRLTHLPTGVVVTCQNERSQLQNKARAMQVLA 277
Query: 112 A 112
A
Sbjct: 278 A 278
>gi|336115487|ref|YP_004570254.1| peptide chain release factor 1 [Bacillus coagulans 2-6]
gi|335368917|gb|AEH54868.1| peptide chain release factor 1 [Bacillus coagulans 2-6]
Length = 356
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 40/60 (66%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
I+EKDI+ SGPGGQ+V T + V LTHIPTGIV+ C +S +N++ A ++L A
Sbjct: 215 INEKDIRVDTFASSGPGGQSVNTTMSAVRLTHIPTGIVVSCQDEKSQIKNKEKAMKVLRA 274
>gi|296169215|ref|ZP_06850868.1| peptide chain release factor RF2 [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295896113|gb|EFG75780.1| peptide chain release factor RF2 [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length = 368
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 40/61 (65%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
I E D++ R SGPGGQ+V T++ V LTHIPTGIV+ C +S +N+ +A +L A
Sbjct: 232 IPEGDVRVDVYRSSGPGGQSVNTTDSAVRLTHIPTGIVVTCQNEKSQLQNKISAMRVLQA 291
Query: 113 Q 113
+
Sbjct: 292 K 292
>gi|347751863|ref|YP_004859428.1| peptide chain release factor 1 [Bacillus coagulans 36D1]
gi|347584381|gb|AEP00648.1| peptide chain release factor 1 [Bacillus coagulans 36D1]
Length = 356
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 40/60 (66%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
I+EKDI+ SGPGGQ+V T + V LTHIPTGIV+ C +S +N++ A ++L A
Sbjct: 215 INEKDIRVDTFASSGPGGQSVNTTMSAVRLTHIPTGIVVSCQDEKSQIKNKEKAMKVLRA 274
>gi|225568388|ref|ZP_03777413.1| hypothetical protein CLOHYLEM_04465 [Clostridium hylemonae DSM
15053]
gi|225162616|gb|EEG75235.1| hypothetical protein CLOHYLEM_04465 [Clostridium hylemonae DSM
15053]
Length = 357
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
IDEKDI+ +R SG GGQ V T++ V LTH PTGIVI +S +N++ A LL +
Sbjct: 215 IDEKDIRIDVMRASGNGGQCVNTTDSAVRLTHYPTGIVIYSQTEKSQLQNKEKAFRLLRS 274
Query: 113 Q-WDVQVNGEDSLNAQIRR 130
+ +D+++ + + A+ RR
Sbjct: 275 KLYDLEMEKKQASEAEARR 293
>gi|41409273|ref|NP_962109.1| peptide chain release factor 2 [Mycobacterium avium subsp.
paratuberculosis K-10]
gi|41398093|gb|AAS05723.1| PrfB [Mycobacterium avium subsp. paratuberculosis K-10]
Length = 373
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 40/61 (65%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
I E D++ R SGPGGQ+V T++ V LTHIPTGIV+ C +S +N+ +A +L A
Sbjct: 237 IPEGDVRVDVYRSSGPGGQSVNTTDSAVRLTHIPTGIVVTCQNEKSQLQNKISAMRVLQA 296
Query: 113 Q 113
+
Sbjct: 297 K 297
>gi|417749179|ref|ZP_12397585.1| peptide chain release factor 2 [Mycobacterium avium subsp.
paratuberculosis S397]
gi|336459371|gb|EGO38314.1| peptide chain release factor 2 [Mycobacterium avium subsp.
paratuberculosis S397]
Length = 370
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 40/61 (65%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
I E D++ R SGPGGQ+V T++ V LTHIPTGIV+ C +S +N+ +A +L A
Sbjct: 234 IPEGDVRVDVYRSSGPGGQSVNTTDSAVRLTHIPTGIVVTCQNEKSQLQNKISAMRVLQA 293
Query: 113 Q 113
+
Sbjct: 294 K 294
>gi|336395829|ref|ZP_08577228.1| peptide chain release factor 1 [Lactobacillus farciminis KCTC 3681]
Length = 365
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 38/58 (65%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELL 110
ID KDI+ R SG GGQ + KT++ V +TH+PTGIV+ RS +NR+ A ++L
Sbjct: 218 IDPKDIRTDVYRSSGAGGQHINKTSSAVRMTHLPTGIVVAMQDQRSQQQNRQKAMQIL 275
>gi|291276501|ref|YP_003516273.1| peptide chain release factor 2 [Helicobacter mustelae 12198]
gi|290963695|emb|CBG39527.1| peptide chain release factor 2 [Helicobacter mustelae 12198]
Length = 365
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 61/118 (51%), Gaps = 12/118 (10%)
Query: 3 IKIVMWPMRDRNLAGIRLLESQVTITRELRNDGYHRNLVSNIDIYST--IPKID------ 54
IK V + ++ N G ES V R +RN + N + S P++D
Sbjct: 173 IKGVAFLVKGENAYGYMKTESGVH--RLVRNSPFDANTKRHTSFASVQVSPELDDNIEID 230
Query: 55 --EKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELL 110
EKD++ R SG GGQ + KT + + +TH+PTGIV++C RS +N+ +A ++L
Sbjct: 231 IEEKDLRIDTYRASGAGGQHINKTESAIRITHLPTGIVVQCQNDRSQHKNKASALKML 288
>gi|227510126|ref|ZP_03940175.1| peptide chain release factor 1 [Lactobacillus brevis subsp.
gravesensis ATCC 27305]
gi|227190331|gb|EEI70398.1| peptide chain release factor 1 [Lactobacillus brevis subsp.
gravesensis ATCC 27305]
Length = 357
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 46/77 (59%), Gaps = 2/77 (2%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
ID KDI+ R SG GGQ + KT++ V +TH+PTGIV+ RS +NR A ++L A
Sbjct: 219 IDPKDIRVDVYRSSGAGGQHINKTSSAVRMTHLPTGIVVAMQDERSQQQNRAKAMKILKA 278
Query: 113 Q-WDVQVNGE-DSLNAQ 127
+ +D E D NA+
Sbjct: 279 RVYDYYAQQEQDQYNAE 295
>gi|297626158|ref|YP_003687921.1| peptide chain release factor 2 [Propionibacterium freudenreichii
subsp. shermanii CIRM-BIA1]
gi|296921923|emb|CBL56483.1| Peptide chain release factor 2 (RF-2) [Propionibacterium
freudenreichii subsp. shermanii CIRM-BIA1]
Length = 369
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 47/88 (53%), Gaps = 5/88 (5%)
Query: 31 LRNDGYHRNLVSNIDIYSTIPKIDEKDIQERFVR-----GSGPGGQAVAKTNNCVVLTHI 85
N G + + +++ + + D DI E+ +R SGPGGQ V T++ V +TH+
Sbjct: 206 FDNQGRRQTSFAGVEVLPVVEETDNIDIPEKDIRVDVFHASGPGGQGVNTTDSAVRITHL 265
Query: 86 PTGIVIKCHQSRSLSENRKTARELLVAQ 113
PTGIV+ C RS +N+ +L A+
Sbjct: 266 PTGIVVTCQNERSQIQNKAAGLRVLQAK 293
>gi|184200614|ref|YP_001854821.1| peptide chain release factor 1 [Kocuria rhizophila DC2201]
gi|238689221|sp|B2GLX4.1|RF1_KOCRD RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|183580844|dbj|BAG29315.1| peptide chain release factor 1 [Kocuria rhizophila DC2201]
Length = 369
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 58/107 (54%), Gaps = 11/107 (10%)
Query: 41 VSNIDIYSTIPKIDEKDIQER-----FVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQ 95
+ + ++ + + DE DI + R SGPGGQ+V T++ V +TH+PTGIV+
Sbjct: 199 AAGVLVFPEVDEPDEIDISQNDLKIDVYRSSGPGGQSVNTTDSAVRITHVPTGIVVSMQN 258
Query: 96 SRSLSENRKTA----RELLVAQWDVQVNGEDSL--NAQIRRIDEKRR 136
+S +NR+ A R L+A Q++ E++ +Q+R +D R
Sbjct: 259 EKSQLQNREAAMRVLRARLLAHQQEQIDAENAAARKSQVRTVDRSER 305
>gi|402548864|ref|ZP_10845717.1| peptide chain release factor 1 [SAR86 cluster bacterium SAR86C]
Length = 361
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 42/65 (64%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
ID+ D++ R SG GGQ V KT++ V LTHIP+G+V++C RS +N++ A LL +
Sbjct: 219 IDKNDLRVDTFRASGAGGQHVNKTDSAVRLTHIPSGLVVECQDGRSQHKNKEKALSLLAS 278
Query: 113 QWDVQ 117
+ Q
Sbjct: 279 KLKQQ 283
>gi|365904465|ref|ZP_09442224.1| peptide chain release factor 1 [Lactobacillus versmoldensis KCTC
3814]
Length = 365
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 38/58 (65%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELL 110
ID KDI+ R SG GGQ + KT++ V +TH+PTGIV+ RS +NR+ A ++L
Sbjct: 218 IDPKDIRTDVYRSSGAGGQHINKTSSAVRMTHLPTGIVVAMQDQRSQQQNREKAMQIL 275
>gi|297805172|ref|XP_002870470.1| HCF109 [Arabidopsis lyrata subsp. lyrata]
gi|297316306|gb|EFH46729.1| HCF109 [Arabidopsis lyrata subsp. lyrata]
Length = 453
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 65/132 (49%), Gaps = 21/132 (15%)
Query: 31 LRNDGYHRNLVSNIDIYSTIPK------IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTH 84
+ G + S +++ +P+ I E+D+ F R G GGQ V K V +TH
Sbjct: 283 FNSKGLRQTSFSGVEVMPLLPEEAVGIEIPEEDLDISFTRAGGKGGQNVNKVETAVRITH 342
Query: 85 IPTGIVIKCHQSRSLSENRKTARELLVAQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKR 144
IPTG+ ++C + RS N+ R L+ L A++ I E++RAT E K+
Sbjct: 343 IPTGVAVRCTEERSQLANK--TRALI------------RLKAKLLVIAEEQRAT-EIKEI 387
Query: 145 KLDALKKAWKER 156
+ DA+K W ++
Sbjct: 388 RGDAVKAEWGQQ 399
>gi|56421913|ref|YP_149231.1| peptide chain release factor 1 [Geobacillus kaustophilus HTA426]
gi|261420783|ref|YP_003254465.1| peptide chain release factor 1 [Geobacillus sp. Y412MC61]
gi|297531578|ref|YP_003672853.1| peptide chain release factor 1 [Geobacillus sp. C56-T3]
gi|319768453|ref|YP_004133954.1| peptide chain release factor 1 [Geobacillus sp. Y412MC52]
gi|448239656|ref|YP_007403714.1| peptide chain release factor 1 [Geobacillus sp. GHH01]
gi|61214572|sp|Q5KUH3.1|RF1_GEOKA RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|56381755|dbj|BAD77663.1| peptide chain release factor 1 (RF-1) in translation [Geobacillus
kaustophilus HTA426]
gi|261377240|gb|ACX79983.1| peptide chain release factor 1 [Geobacillus sp. Y412MC61]
gi|297254830|gb|ADI28276.1| peptide chain release factor 1 [Geobacillus sp. C56-T3]
gi|317113319|gb|ADU95811.1| peptide chain release factor 1 [Geobacillus sp. Y412MC52]
gi|445208498|gb|AGE23963.1| peptide chain release factor 1 [Geobacillus sp. GHH01]
Length = 358
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 41/61 (67%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
+I+EKDI+ SGPGGQ+V T + V LTHIPTGIV+ C +S +N++ A ++L
Sbjct: 214 EINEKDIRVDTFASSGPGGQSVNTTMSAVRLTHIPTGIVVTCQDEKSQIKNKEKAMKVLR 273
Query: 112 A 112
A
Sbjct: 274 A 274
>gi|375010559|ref|YP_004984192.1| peptide chain release factor 1 [Geobacillus thermoleovorans
CCB_US3_UF5]
gi|359289408|gb|AEV21092.1| Peptide chain release factor 1 [Geobacillus thermoleovorans
CCB_US3_UF5]
Length = 366
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 41/61 (67%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
+I+EKDI+ SGPGGQ+V T + V LTHIPTGIV+ C +S +N++ A ++L
Sbjct: 222 EINEKDIRVDTFASSGPGGQSVNTTMSAVRLTHIPTGIVVTCQDEKSQIKNKEKAMKVLR 281
Query: 112 A 112
A
Sbjct: 282 A 282
>gi|302875854|ref|YP_003844487.1| peptide chain release factor 2 [Clostridium cellulovorans 743B]
gi|302578711|gb|ADL52723.1| peptide chain release factor 2 [Clostridium cellulovorans 743B]
Length = 369
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 49/88 (55%), Gaps = 14/88 (15%)
Query: 23 SQVTITRELRNDGYHRNLVSNIDIYSTIPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVL 82
+ + +T ELR D N++I + K+D R SG GGQ V KT + + +
Sbjct: 218 ASLEVTPELRQD-------QNVEINPSDLKVDT-------YRASGAGGQHVNKTESAIRI 263
Query: 83 THIPTGIVIKCHQSRSLSENRKTARELL 110
THIPTGIV++C RS +NR+TA +L
Sbjct: 264 THIPTGIVVQCQNERSQIQNRETALNML 291
>gi|238917365|ref|YP_002930882.1| peptide chain release factor RF-1 [Eubacterium eligens ATCC 27750]
gi|259585239|sp|C4Z1S4.1|RF1_EUBE2 RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|238872725|gb|ACR72435.1| peptide chain release factor RF-1 [Eubacterium eligens ATCC 27750]
Length = 357
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
IDEKDI+ +R SG GGQ V T++ V LTH PTGIVI +S +N++ A LL A
Sbjct: 215 IDEKDIRIDVMRASGNGGQCVNTTDSAVRLTHYPTGIVIYSQTEKSQIQNKEKAFALLRA 274
Query: 113 Q-WDVQVNGEDSLNAQIRR 130
+ +D++ A RR
Sbjct: 275 KLYDIETQKAHDAEADARR 293
>gi|295395219|ref|ZP_06805427.1| peptide chain release factor RF2 [Brevibacterium mcbrellneri ATCC
49030]
gi|294971981|gb|EFG47848.1| peptide chain release factor RF2 [Brevibacterium mcbrellneri ATCC
49030]
Length = 376
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 52/104 (50%), Gaps = 16/104 (15%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
IDE D++ R SGPGGQ+V T++ V +TH+PTG+V+ +S +NR A +L
Sbjct: 232 IDENDLRIDVFRSSGPGGQSVNTTDSAVRITHVPTGVVVSMQNEKSQIQNRAAAMRVL-- 289
Query: 113 QWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKLDALKKAWKER 156
Q R + KR + QKK +K +W ++
Sbjct: 290 --------------QSRLLQLKREEEEAQKKDLAGDIKASWGDQ 319
>gi|237785868|ref|YP_002906573.1| peptide chain release factor 1 [Corynebacterium kroppenstedtii DSM
44385]
gi|259585217|sp|C4LJM5.1|RF1_CORK4 RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|237758780|gb|ACR18030.1| peptide chain release factor RF-1 [Corynebacterium kroppenstedtii
DSM 44385]
Length = 357
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 41/61 (67%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
+ID+KDI+ R SG GGQ V T++ V +TH+PTG+++ C + RS +N+ A ++L
Sbjct: 217 EIDDKDIRVDVYRSSGKGGQGVNTTDSAVRITHLPTGLIVTCQKERSQIQNKARAMQVLA 276
Query: 112 A 112
A
Sbjct: 277 A 277
>gi|227513055|ref|ZP_03943104.1| peptide chain release factor 1 [Lactobacillus buchneri ATCC 11577]
gi|227083630|gb|EEI18942.1| peptide chain release factor 1 [Lactobacillus buchneri ATCC 11577]
Length = 361
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 46/77 (59%), Gaps = 2/77 (2%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
ID KDI+ R SG GGQ + KT++ V +TH+PTGIV+ RS +NR A ++L A
Sbjct: 219 IDPKDIRVDVYRSSGAGGQHINKTSSAVRMTHLPTGIVVAMQDERSQQQNRAKAMKILKA 278
Query: 113 Q-WDVQVNGE-DSLNAQ 127
+ +D E D NA+
Sbjct: 279 RVYDYYAQQEQDQYNAE 295
>gi|422325053|ref|ZP_16406090.1| peptide chain release factor 1 [Rothia mucilaginosa M508]
gi|353343762|gb|EHB88077.1| peptide chain release factor 1 [Rothia mucilaginosa M508]
Length = 360
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 55/91 (60%), Gaps = 6/91 (6%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTA----R 107
+I++ D++ R SGPGGQ+V T++ V +TH+PTGIV+ +S +NR+ A R
Sbjct: 215 EINQNDLKIDVYRSSGPGGQSVNTTDSAVRITHLPTGIVVAMQNEKSQLQNREAAMRVLR 274
Query: 108 ELLVAQWDVQVNGEDSLN--AQIRRIDEKRR 136
L+A Q++ E++ + +Q+R +D R
Sbjct: 275 ARLLAHQQEQIDAENAAHRASQVRTMDRSER 305
>gi|339022504|ref|ZP_08646441.1| translation peptide chain release factor 2 (RF-2) [Acetobacter
tropicalis NBRC 101654]
gi|338750491|dbj|GAA09745.1| translation peptide chain release factor 2 (RF-2) [Acetobacter
tropicalis NBRC 101654]
Length = 322
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 40/61 (65%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
++++ D++ R SG GGQ V KT++ + +THIPTGIV+ C RS NR TA ++L
Sbjct: 177 EVNDSDLKVDTFRASGAGGQHVNKTDSAIRITHIPTGIVVACQTDRSQHRNRATAMQMLR 236
Query: 112 A 112
A
Sbjct: 237 A 237
>gi|339327370|ref|YP_004687063.1| peptide chain release factor 1 [Cupriavidus necator N-1]
gi|338167527|gb|AEI78582.1| peptide chain release factor 1 [Cupriavidus necator N-1]
Length = 360
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
+I+ D++ R SG GGQ V KT++ V LTH+PTGIV++C RS N+ A ++L
Sbjct: 216 EINPADLRIDTFRASGAGGQHVNKTDSAVRLTHLPTGIVVECQDDRSQHRNKDKAMKVLA 275
Query: 112 AQW-DVQVNGEDSLNAQIRR 130
A+ D+Q + A RR
Sbjct: 276 ARIKDMQTRAAQAKEASTRR 295
>gi|227548000|ref|ZP_03978049.1| peptide chain release factor 1 [Corynebacterium lipophiloflavum DSM
44291]
gi|227079906|gb|EEI17869.1| peptide chain release factor 1 [Corynebacterium lipophiloflavum DSM
44291]
Length = 357
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 40/63 (63%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
IDEKD++ R SG GGQ V T++ V +TH+PT IV+ C RS +NR A ++L A
Sbjct: 218 IDEKDLRIDVYRSSGKGGQGVNTTDSAVRITHLPTNIVVTCQNERSQIQNRARAMQVLQA 277
Query: 113 QWD 115
+ D
Sbjct: 278 RLD 280
>gi|118467007|ref|YP_883159.1| peptide chain release factor 2 [Mycobacterium avium 104]
gi|166225107|sp|A0QJS1.1|RF2_MYCA1 RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|118168294|gb|ABK69191.1| peptide chain release factor 2 [Mycobacterium avium 104]
Length = 370
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 40/61 (65%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
I E D++ R SGPGGQ+V T++ V LTHIPTGIV+ C +S +N+ +A +L A
Sbjct: 234 IPEGDVRVDVYRSSGPGGQSVNTTDSAVRLTHIPTGIVVTCQNEKSQLQNKISAMRVLQA 293
Query: 113 Q 113
+
Sbjct: 294 K 294
>gi|441506396|ref|ZP_20988368.1| Peptide chain release factor 1 [Photobacterium sp. AK15]
gi|441425938|gb|ELR63428.1| Peptide chain release factor 1 [Photobacterium sp. AK15]
Length = 363
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 53/99 (53%), Gaps = 13/99 (13%)
Query: 48 STIPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTAR 107
+ IP+I+ D++ R SG GGQ V T++ + +TH+PTGIV++C RS +N+ A
Sbjct: 215 AEIPEINTGDLKIDTFRASGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKAM 274
Query: 108 ELLVAQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKL 146
+L A+ I+ +EKR A + +R L
Sbjct: 275 SVLAARI-------------IKAEEEKRHAEEASTRRNL 300
>gi|254568480|ref|XP_002491350.1| hypothetical protein [Komagataella pastoris GS115]
gi|238031147|emb|CAY69070.1| Hypothetical protein PAS_chr2-1_0443 [Komagataella pastoris GS115]
Length = 168
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 67/113 (59%), Gaps = 8/113 (7%)
Query: 51 PKIDEKDIQERFVRGSGPGGQA-VAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTAREL 109
P I E DI+E+F++G G + KTN+ V LTHI TGIV+ +RS +NRK ARE+
Sbjct: 26 PTIAEGDIKEKFIKGGSGKGGQKINKTNSKVQLTHIATGIVVTSQATRSREQNRKIAREI 85
Query: 110 LVAQWDVQVNGEDSLNAQIRRIDEKRRATQEQK----KRKLDALKKAWKERED 158
L + + ED N++ R + E+++ + +K K K + L+K +E+ED
Sbjct: 86 LALKLQ---DLEDPANSRQRIVIERQKMVKARKNKRTKAKYETLEKNKQEKED 135
>gi|254776429|ref|ZP_05217945.1| peptide chain release factor 2 [Mycobacterium avium subsp. avium
ATCC 25291]
Length = 370
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 40/61 (65%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
I E D++ R SGPGGQ+V T++ V LTHIPTGIV+ C +S +N+ +A +L A
Sbjct: 234 IPEGDVRVDVYRSSGPGGQSVNTTDSAVRLTHIPTGIVVTCQNEKSQLQNKISAMRVLQA 293
Query: 113 Q 113
+
Sbjct: 294 K 294
>gi|227524270|ref|ZP_03954319.1| peptide chain release factor 1 [Lactobacillus hilgardii ATCC 8290]
gi|227088501|gb|EEI23813.1| peptide chain release factor 1 [Lactobacillus hilgardii ATCC 8290]
Length = 361
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 46/77 (59%), Gaps = 2/77 (2%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
ID KDI+ R SG GGQ + KT++ V +TH+PTGIV+ RS +NR A ++L A
Sbjct: 219 IDPKDIRVDVYRSSGAGGQHINKTSSAVRMTHLPTGIVVAMQDERSQQQNRAKAMKILKA 278
Query: 113 Q-WDVQVNGE-DSLNAQ 127
+ +D E D NA+
Sbjct: 279 RVYDYYAQQEQDQYNAE 295
>gi|401840199|gb|EJT43104.1| YLR281C-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 187
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Query: 55 EKDIQERFVRGS-GPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVAQ 113
EK E+F+ G GPGGQ + K N+ V L H PTGIV++C ++RS +NRK AR L +
Sbjct: 66 EKQCTEKFLHGGRGPGGQKINKCNSKVQLRHEPTGIVVECQETRSREQNRKLARLKLARE 125
Query: 114 WDVQVNGEDS 123
V + S
Sbjct: 126 LAVSCDATPS 135
>gi|383825061|ref|ZP_09980212.1| peptide chain release factor 2 [Mycobacterium xenopi RIVM700367]
gi|383335463|gb|EID13893.1| peptide chain release factor 2 [Mycobacterium xenopi RIVM700367]
Length = 368
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 40/61 (65%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
I E DI+ R SGPGGQ+V T++ V LTH+PTGIV+ C +S +N+ +A +L A
Sbjct: 232 IPEGDIRVDVYRSSGPGGQSVNTTDSAVRLTHLPTGIVVTCQNEKSQLQNKMSALRVLQA 291
Query: 113 Q 113
+
Sbjct: 292 K 292
>gi|372489474|ref|YP_005029039.1| peptide chain release factor 2 [Dechlorosoma suillum PS]
gi|359356027|gb|AEV27198.1| peptide chain release factor 2 [Dechlorosoma suillum PS]
Length = 367
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 53/103 (51%), Gaps = 10/103 (9%)
Query: 20 LLESQVTITRELRNDGYHRNLVSNIDIYSTI--PKIDEK--------DIQERFVRGSGPG 69
+L ++ I R +R + N + S P++D+ D++ R SG G
Sbjct: 193 MLRTETGIHRLVRKSPFDSNARRHTSFTSVFVYPEVDDSIEIDINPADVRTDTYRASGAG 252
Query: 70 GQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
GQ + KT++ V LTH+PTGIV++C RS NR A ++L A
Sbjct: 253 GQHINKTDSAVRLTHVPTGIVVQCQNDRSQHRNRDEAWQMLRA 295
>gi|400535590|ref|ZP_10799126.1| peptide chain release factor 2 [Mycobacterium colombiense CECT
3035]
gi|400330633|gb|EJO88130.1| peptide chain release factor 2 [Mycobacterium colombiense CECT
3035]
Length = 370
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 40/61 (65%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
I E D++ R SGPGGQ+V T++ V LTHIPTGIV+ C +S +N+ +A +L A
Sbjct: 234 IPEGDVRVDVYRSSGPGGQSVNTTDSAVRLTHIPTGIVVTCQNEKSQLQNKISAMRVLQA 293
Query: 113 Q 113
+
Sbjct: 294 K 294
>gi|336324934|ref|YP_004604900.1| peptide chain release factor RF-2 [Corynebacterium resistens DSM
45100]
gi|336100916|gb|AEI08736.1| peptide chain release factor RF-2 [Corynebacterium resistens DSM
45100]
Length = 378
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 46/78 (58%), Gaps = 5/78 (6%)
Query: 41 VSNIDIYSTIPKIDEKDIQERFVR-----GSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQ 95
+ +++ + + D DI + VR SGPGGQ+V T++ V LTHIPTGIV+ C
Sbjct: 222 FAEVEVLPVVEQTDHIDIPDAEVRVDVYRSSGPGGQSVNTTDSAVRLTHIPTGIVVTCQN 281
Query: 96 SRSLSENRKTARELLVAQ 113
+S +N+ +A +L A+
Sbjct: 282 EKSQIQNKASAMRVLQAK 299
>gi|269102026|ref|ZP_06154723.1| peptide chain release factor 1 [Photobacterium damselae subsp.
damselae CIP 102761]
gi|268161924|gb|EEZ40420.1| peptide chain release factor 1 [Photobacterium damselae subsp.
damselae CIP 102761]
Length = 362
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 53/99 (53%), Gaps = 13/99 (13%)
Query: 48 STIPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTAR 107
+ IP+I+ D++ R SG GGQ V T++ + +TH+PTGIV++C RS +N+ A
Sbjct: 214 AEIPEINPSDLKIDTYRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKAM 273
Query: 108 ELLVAQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKL 146
+L A+ I+ +EKR A + +R L
Sbjct: 274 SVLAARI-------------IKAEEEKRHAEEASTRRNL 299
>gi|420145956|ref|ZP_14653401.1| Peptide chain release factor 1 (RF-1) [Lactobacillus coryniformis
subsp. coryniformis CECT 5711]
gi|398402395|gb|EJN55743.1| Peptide chain release factor 1 (RF-1) [Lactobacillus coryniformis
subsp. coryniformis CECT 5711]
Length = 360
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 39/60 (65%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
ID KDI+ R SG GGQ + KT++ V +TH+PTGIV+ RS +NR+ A ++L A
Sbjct: 218 IDPKDIRTDVYRSSGAGGQHINKTSSAVRMTHLPTGIVVAMQDQRSQQQNREKAMQILRA 277
>gi|420466487|ref|ZP_14965244.1| peptide chain release factor 2 [Helicobacter pylori Hp H-9]
gi|393084885|gb|EJB85573.1| peptide chain release factor 2 [Helicobacter pylori Hp H-9]
Length = 363
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 37/55 (67%)
Query: 56 KDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELL 110
KD++ + R SG GGQ V KT + V +TH PTGIV++C RS +N+ +A ++L
Sbjct: 236 KDVRYDYYRASGAGGQHVNKTESAVRITHFPTGIVVQCQNDRSQHKNKASALKML 290
>gi|420454722|ref|ZP_14953552.1| peptide chain release factor 2 [Helicobacter pylori Hp A-14]
gi|393073072|gb|EJB73846.1| peptide chain release factor 2 [Helicobacter pylori Hp A-14]
Length = 363
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 37/55 (67%)
Query: 56 KDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELL 110
KD++ + R SG GGQ V KT + V +TH PTGIV++C RS +N+ +A ++L
Sbjct: 236 KDVRYDYYRASGAGGQHVNKTESAVRITHFPTGIVVQCQNDRSQHKNKASALKML 290
>gi|348027317|ref|YP_004767122.1| peptide chain release factor 2 [Megasphaera elsdenii DSM 20460]
gi|341823371|emb|CCC74295.1| peptide chain release factor 2 [Megasphaera elsdenii DSM 20460]
Length = 337
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 57/94 (60%), Gaps = 6/94 (6%)
Query: 41 VSNIDIYSTIP-----KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQ 95
+ +D+ +P +I+ D++ + R SG GGQ V KT++ V +TH+PTGIV++C
Sbjct: 179 FTAVDVMPELPDDVDVEINMDDVRVDYFRASGAGGQHVNKTSSAVRMTHMPTGIVVQCQN 238
Query: 96 SRSLSENRKTARELLVAQ-WDVQVNGEDSLNAQI 128
RS +N++ + L A+ ++++ ++ L A+I
Sbjct: 239 ERSQLQNKEMCLKYLRAKLFELEQEKQEKLKAEI 272
>gi|329114780|ref|ZP_08243537.1| Peptide chain release factor 2 [Acetobacter pomorum DM001]
gi|326695911|gb|EGE47595.1| Peptide chain release factor 2 [Acetobacter pomorum DM001]
Length = 333
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 40/61 (65%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
+I++ D++ R SG GGQ V KT++ + +TH+PTGIV+ C RS NR TA ++L
Sbjct: 188 EINDADLKVDTFRASGAGGQHVNKTDSAIRITHMPTGIVVACQTDRSQHRNRATAMQMLR 247
Query: 112 A 112
A
Sbjct: 248 A 248
>gi|296268873|ref|YP_003651505.1| peptide chain release factor 1 [Thermobispora bispora DSM 43833]
gi|296091660|gb|ADG87612.1| peptide chain release factor 1 [Thermobispora bispora DSM 43833]
Length = 350
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 40/61 (65%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
+ID D++ R SGPGGQ+V T++ V +THIPTG+V+ C +S +N++ A +L
Sbjct: 207 QIDPNDLRIDVFRSSGPGGQSVNTTDSAVRITHIPTGVVVSCQNEKSQLQNKEAAMRILR 266
Query: 112 A 112
A
Sbjct: 267 A 267
>gi|294994856|ref|ZP_06800547.1| peptide chain release factor 1 [Mycobacterium tuberculosis 210]
Length = 206
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 49/91 (53%), Gaps = 6/91 (6%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
+IDE D++ R SG GGQ V T++ V +TH+PTGIV+ C RS +N+ A ++L
Sbjct: 66 QIDESDLRIDVFRSSGKGGQGVNTTDSAVRITHLPTGIVVTCQNERSQLQNKTRALQVLA 125
Query: 112 AQWDVQVNGEDSLNA------QIRRIDEKRR 136
A+ + +A QIR +D R
Sbjct: 126 ARLQAMAEEQALADASADRASQIRTVDRSER 156
>gi|425432974|ref|ZP_18813513.1| peptide chain release factor 2 [Helicobacter pylori GAM100Ai]
gi|410714411|gb|EKQ71883.1| peptide chain release factor 2 [Helicobacter pylori GAM100Ai]
Length = 363
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 37/55 (67%)
Query: 56 KDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELL 110
KD++ + R SG GGQ V KT + V +TH PTGIV++C RS +N+ +A ++L
Sbjct: 236 KDVRYDYYRASGAGGQHVNKTESAVRITHFPTGIVVQCQNDRSQHKNKASALKML 290
>gi|373450066|ref|ZP_09542138.1| Peptide chain release factor 2 (RF-2) [Wolbachia pipientis wAlbB]
gi|371932728|emb|CCE77126.1| Peptide chain release factor 2 (RF-2) [Wolbachia pipientis wAlbB]
Length = 337
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 38/58 (65%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELL 110
+DEKD++ R SG GGQ V KT + V +THIPTG+V +C RS +N+ A +LL
Sbjct: 206 VDEKDLKIDTYRASGAGGQHVNKTESAVRITHIPTGVVAQCQNGRSQHKNKDEALKLL 263
>gi|336392692|ref|ZP_08574091.1| peptide chain release factor 1 [Lactobacillus coryniformis subsp.
torquens KCTC 3535]
Length = 363
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 39/60 (65%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
ID KDI+ R SG GGQ + KT++ V +TH+PTGIV+ RS +NR+ A ++L A
Sbjct: 221 IDPKDIRTDVYRSSGAGGQHINKTSSAVRMTHLPTGIVVAMQDQRSQQQNREKAMQILRA 280
>gi|307689287|ref|ZP_07631733.1| peptide chain release factor 2 [Clostridium cellulovorans 743B]
Length = 329
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 49/88 (55%), Gaps = 14/88 (15%)
Query: 23 SQVTITRELRNDGYHRNLVSNIDIYSTIPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVL 82
+ + +T ELR D N++I + K+D R SG GGQ V KT + + +
Sbjct: 178 ASLEVTPELRQD-------QNVEINPSDLKVDT-------YRASGAGGQHVNKTESAIRI 223
Query: 83 THIPTGIVIKCHQSRSLSENRKTARELL 110
THIPTGIV++C RS +NR+TA +L
Sbjct: 224 THIPTGIVVQCQNERSQIQNRETALNML 251
>gi|302529800|ref|ZP_07282142.1| peptide chain release factor 1 [Streptomyces sp. AA4]
gi|302438695|gb|EFL10511.1| peptide chain release factor 1 [Streptomyces sp. AA4]
Length = 356
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 39/60 (65%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
ID D++ R SGPGGQ+V T++ V +TH+PTGIV+ C +S +NR A ++L A
Sbjct: 215 IDPNDLRIDVFRSSGPGGQSVNTTDSAVRITHLPTGIVVSCQNEKSQIQNRARALQVLQA 274
>gi|255326261|ref|ZP_05367347.1| peptide chain release factor 1 [Rothia mucilaginosa ATCC 25296]
gi|283458332|ref|YP_003362953.1| protein chain release factor A [Rothia mucilaginosa DY-18]
gi|255296715|gb|EET76046.1| peptide chain release factor 1 [Rothia mucilaginosa ATCC 25296]
gi|283134368|dbj|BAI65133.1| protein chain release factor A [Rothia mucilaginosa DY-18]
Length = 360
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 55/91 (60%), Gaps = 6/91 (6%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTA----R 107
+I++ D++ R SGPGGQ+V T++ V +TH+PTGIV+ +S +NR+ A R
Sbjct: 215 EINQNDLKIDVYRSSGPGGQSVNTTDSAVRITHLPTGIVVAMQNEKSQLQNREAAMRVLR 274
Query: 108 ELLVAQWDVQVNGEDSLN--AQIRRIDEKRR 136
L+A Q++ E++ + +Q+R +D R
Sbjct: 275 ARLLAHQQEQIDAENAAHRASQVRTMDRSER 305
>gi|190571741|ref|YP_001976099.1| protein chain release factor b [Wolbachia endosymbiont of Culex
quinquefasciatus Pel]
gi|190358013|emb|CAQ55482.1| protein chain release factor b [Wolbachia endosymbiont of Culex
quinquefasciatus Pel]
Length = 335
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 38/58 (65%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELL 110
+DEKD++ R SG GGQ V KT + V +THIPTG+V +C RS +N+ A +LL
Sbjct: 204 VDEKDLKIDTYRASGAGGQHVNKTESAVRITHIPTGVVAQCQNGRSQHKNKDEALKLL 261
>gi|421709571|ref|ZP_16148931.1| peptide chain release factor 2 [Helicobacter pylori R018c]
gi|421722823|ref|ZP_16162081.1| peptide chain release factor 2 [Helicobacter pylori R056a]
gi|407212128|gb|EKE81993.1| peptide chain release factor 2 [Helicobacter pylori R018c]
gi|407226113|gb|EKE95882.1| peptide chain release factor 2 [Helicobacter pylori R056a]
Length = 363
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 37/55 (67%)
Query: 56 KDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELL 110
KD++ + R SG GGQ V KT + V +TH PTGIV++C RS +N+ +A ++L
Sbjct: 236 KDVRYDYYRASGAGGQHVNKTESAVRITHFPTGIVVQCQNDRSQHKNKASALKML 290
>gi|383935144|ref|ZP_09988582.1| peptide chain release factor 1 [Rheinheimera nanhaiensis E407-8]
gi|383703909|dbj|GAB58673.1| peptide chain release factor 1 [Rheinheimera nanhaiensis E407-8]
Length = 363
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 56/108 (51%), Gaps = 18/108 (16%)
Query: 44 IDIYSTIPK-----IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRS 98
+ I IP+ I+ D++ R SG GGQ V +T++ + +TH+PTGIV++C RS
Sbjct: 205 VAIMPEIPESEAIEINPADLKVDTYRASGAGGQHVNRTDSAIRITHLPTGIVVECQDERS 264
Query: 99 LSENRKTARELLVAQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKL 146
+NR AR + V Q +Q DEKRR +E +R L
Sbjct: 265 QHKNR--ARAMSVLQSRIQAAE-----------DEKRRLAEESTRRSL 299
>gi|333394829|ref|ZP_08476648.1| peptide chain release factor 1 [Lactobacillus coryniformis subsp.
coryniformis KCTC 3167]
Length = 357
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 39/60 (65%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
ID KDI+ R SG GGQ + KT++ V +TH+PTGIV+ RS +NR+ A ++L A
Sbjct: 215 IDPKDIRTDVYRSSGAGGQHINKTSSAVRMTHLPTGIVVAMQDQRSQQQNREKAMQILRA 274
>gi|303247215|ref|ZP_07333489.1| peptide chain release factor 2 [Desulfovibrio fructosovorans JJ]
gi|302491374|gb|EFL51262.1| peptide chain release factor 2 [Desulfovibrio fructosovorans JJ]
Length = 307
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 42/57 (73%), Gaps = 1/57 (1%)
Query: 63 VRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVAQ-WDVQV 118
R SGPGGQ V KT++ + +TH+PTGIV++C +S NR+TA ++L A+ +D+++
Sbjct: 182 FRASGPGGQHVNKTSSAIRITHLPTGIVVQCQNEKSQHRNRETAMKVLKARLYDLEL 238
>gi|113869288|ref|YP_727777.1| peptide chain release factor 1 [Ralstonia eutropha H16]
gi|113528064|emb|CAJ94409.1| protein chain release factor A (RF-1) [Ralstonia eutropha H16]
Length = 356
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
+I+ D++ R SG GGQ V KT++ V LTH+PTGIV++C RS N+ A ++L
Sbjct: 212 EINPADLRIDTFRASGAGGQHVNKTDSAVRLTHLPTGIVVECQDDRSQHRNKDKAMKVLA 271
Query: 112 AQW-DVQVNGEDSLNAQIRR 130
A+ D+Q + A RR
Sbjct: 272 ARIKDMQTRAAQAKEASTRR 291
>gi|77360001|ref|YP_339576.1| peptide chain release factor 1 [Pseudoalteromonas haloplanktis
TAC125]
gi|119361581|sp|Q3IK95.1|RF1_PSEHT RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|76874912|emb|CAI86133.1| Peptide chain release factor 1 (RF-1) [Pseudoalteromonas
haloplanktis TAC125]
Length = 361
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 51/95 (53%), Gaps = 13/95 (13%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
+I+ D++ R SG GGQ V KT++ + +THIPTG+V++C RS +NR A +L
Sbjct: 218 EINSADLKVDTFRASGAGGQHVNKTDSAIRITHIPTGVVVECQDQRSQHKNRAKAMSVLA 277
Query: 112 AQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKL 146
A+ + DEKR A + ++R L
Sbjct: 278 ARLQ-------------QAEDEKRDAAEASERRNL 299
>gi|420470071|ref|ZP_14968782.1| peptide chain release factor 2 [Helicobacter pylori Hp H-11]
gi|393087117|gb|EJB87787.1| peptide chain release factor 2 [Helicobacter pylori Hp H-11]
Length = 363
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 37/55 (67%)
Query: 56 KDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELL 110
KD++ + R SG GGQ V KT + V +TH PTGIV++C RS +N+ +A ++L
Sbjct: 236 KDVRYDYYRASGAGGQHVNKTESAVRITHFPTGIVVQCQNDRSQHKNKASALKML 290
>gi|319789223|ref|YP_004150856.1| hypothetical protein Theam_0242 [Thermovibrio ammonificans HB-1]
gi|317113725|gb|ADU96215.1| hypothetical protein Theam_0242 [Thermovibrio ammonificans HB-1]
Length = 373
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 44/72 (61%), Gaps = 8/72 (11%)
Query: 49 TIPKIDE--------KDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLS 100
+P+IDE +D++ R SG GGQ V KT++ V +THIPTGIV+ C RS
Sbjct: 223 VVPEIDEDIEVEIKEEDLRIDTYRASGAGGQHVNKTDSAVRITHIPTGIVVTCQSERSQI 282
Query: 101 ENRKTARELLVA 112
+NR+ A ++L A
Sbjct: 283 QNRQRAMKILKA 294
>gi|229489997|ref|ZP_04383850.1| peptide chain release factor 1 [Rhodococcus erythropolis SK121]
gi|453067073|ref|ZP_21970363.1| peptide chain release factor 1 [Rhodococcus qingshengii BKS 20-40]
gi|226186521|dbj|BAH34625.1| peptide chain release factor 1 [Rhodococcus erythropolis PR4]
gi|229323098|gb|EEN88866.1| peptide chain release factor 1 [Rhodococcus erythropolis SK121]
gi|452767460|gb|EME25700.1| peptide chain release factor 1 [Rhodococcus qingshengii BKS 20-40]
Length = 359
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 41/65 (63%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 111
+IDE D++ R SG GGQ V T++ V +TH+PTGIV+ C RS +N+ A ++L
Sbjct: 219 QIDESDLRIDVYRSSGKGGQGVNTTDSAVRITHLPTGIVVTCQNERSQLQNKARAMQVLA 278
Query: 112 AQWDV 116
A+ V
Sbjct: 279 ARLQV 283
>gi|410866509|ref|YP_006981120.1| Peptide chain release factor 1 [Propionibacterium acidipropionici
ATCC 4875]
gi|410823150|gb|AFV89765.1| Peptide chain release factor 1 [Propionibacterium acidipropionici
ATCC 4875]
Length = 373
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 35/54 (64%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTA 106
+D D++ R SGPGGQ V T++ V LTHIPTGIV+ C RS +N++ A
Sbjct: 228 LDPADVRVDVFRSSGPGGQGVNTTDSAVRLTHIPTGIVVSCQNERSQLQNKEQA 281
>gi|375099193|ref|ZP_09745456.1| peptide chain release factor 2 [Saccharomonospora cyanea NA-134]
gi|374659925|gb|EHR59803.1| peptide chain release factor 2 [Saccharomonospora cyanea NA-134]
Length = 368
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 40/58 (68%)
Query: 56 KDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVAQ 113
KDI+ R SGPGGQ+V T++ V +TH+PTGIV+ C +S +N+ +A ++L A+
Sbjct: 235 KDIRVDVYRSSGPGGQSVNTTDSAVRITHLPTGIVVSCQNEKSQLQNKASAMKVLQAK 292
>gi|213019226|ref|ZP_03335033.1| protein chain release factor b [Wolbachia endosymbiont of Culex
quinquefasciatus JHB]
gi|212995335|gb|EEB55976.1| protein chain release factor b [Wolbachia endosymbiont of Culex
quinquefasciatus JHB]
Length = 337
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 38/58 (65%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELL 110
+DEKD++ R SG GGQ V KT + V +THIPTG+V +C RS +N+ A +LL
Sbjct: 206 VDEKDLKIDTYRASGAGGQHVNKTESAVRITHIPTGVVAQCQNGRSQHKNKDEALKLL 263
>gi|326803667|ref|YP_004321485.1| peptide chain release factor 1 [Aerococcus urinae ACS-120-V-Col10a]
gi|326651316|gb|AEA01499.1| peptide chain release factor 1 [Aerococcus urinae ACS-120-V-Col10a]
Length = 360
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/59 (49%), Positives = 38/59 (64%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELL 110
+IDEKDI+ R SG GGQ V KT++ V +THIPTGI + RS +NR+ A +L
Sbjct: 215 EIDEKDIRTDIYRASGAGGQHVNKTSSAVRMTHIPTGIQVAMQDQRSQQQNREKAMLIL 273
>gi|237752014|ref|ZP_04582494.1| peptide chain release factor 2 [Helicobacter winghamensis ATCC
BAA-430]
gi|229376581|gb|EEO26672.1| peptide chain release factor 2 [Helicobacter winghamensis ATCC
BAA-430]
Length = 367
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 40/59 (67%)
Query: 52 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELL 110
+IDEKD++ R SG GGQ V KT + V +TH P+GIV++C RS +N+ +A ++L
Sbjct: 230 EIDEKDLEIDTYRASGAGGQHVNKTESAVRITHKPSGIVVQCQNDRSQHKNKASALKML 288
>gi|353328587|ref|ZP_08970914.1| protein chain release factor B [Wolbachia endosymbiont wVitB of
Nasonia vitripennis]
Length = 337
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 38/58 (65%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELL 110
+DEKD++ R SG GGQ V KT + V +THIPTG+V +C RS +N+ A +LL
Sbjct: 206 VDEKDLKIDTYRASGAGGQHVNKTESAVRITHIPTGVVAQCQNGRSQHKNKDEALKLL 263
>gi|444429655|ref|ZP_21224837.1| peptide chain release factor 2 [Gordonia soli NBRC 108243]
gi|443889316|dbj|GAC66558.1| peptide chain release factor 2 [Gordonia soli NBRC 108243]
Length = 381
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 38/61 (62%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
I E DI+ R SGPGGQ+V T++ V LTH PTGIV+ C +S +N+ A +L A
Sbjct: 243 IPETDIRVDVYRSSGPGGQSVNTTDSAVRLTHTPTGIVVTCQNEKSQLQNKAAAMRVLQA 302
Query: 113 Q 113
+
Sbjct: 303 K 303
>gi|90412790|ref|ZP_01220790.1| peptide chain release factor 1 [Photobacterium profundum 3TCK]
gi|90326149|gb|EAS42576.1| peptide chain release factor 1 [Photobacterium profundum 3TCK]
Length = 362
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 53/99 (53%), Gaps = 13/99 (13%)
Query: 48 STIPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTAR 107
+ IP+I+ D++ R SG GGQ V T++ + +TH+PTGIV++C RS +N+ A
Sbjct: 214 AEIPEINTGDLKIDTFRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKAM 273
Query: 108 ELLVAQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKL 146
+L A+ I+ +EKR A + +R L
Sbjct: 274 SVLAARI-------------IKAEEEKRHAEEASTRRNL 299
>gi|409436778|ref|ZP_11263948.1| Peptide chain release factor 2 (RF-2) [Rhizobium mesoamericanum
STM3625]
gi|408751702|emb|CCM75102.1| Peptide chain release factor 2 (RF-2) [Rhizobium mesoamericanum
STM3625]
Length = 342
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 55/102 (53%), Gaps = 10/102 (9%)
Query: 21 LESQVTITRELRNDGYHRNL-----VSNIDIYSTIP-----KIDEKDIQERFVRGSGPGG 70
L+++ + R +R Y N S+I +Y + +I+E D + R SG GG
Sbjct: 156 LKTESGVHRLVRISPYDSNARRHTSFSSIWVYPVVDDSINIEINESDCRIDTYRSSGAGG 215
Query: 71 QAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
Q V T++ V +THIPTGIV+ C Q RS +NR A ++L A
Sbjct: 216 QHVNTTDSAVRITHIPTGIVVACQQERSQHKNRAKAWDMLRA 257
>gi|312898633|ref|ZP_07758023.1| peptide chain release factor 2 [Megasphaera micronuciformis F0359]
gi|310620552|gb|EFQ04122.1| peptide chain release factor 2 [Megasphaera micronuciformis F0359]
Length = 338
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 46/77 (59%), Gaps = 5/77 (6%)
Query: 41 VSNIDIYSTIP-----KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQ 95
+ +D+ +P +I+ D++ + R SG GGQ V KT++ V +THIPTGIV++C
Sbjct: 179 FTAVDVMPELPDDAEVEINMDDVRVDYFRASGAGGQHVNKTSSAVRMTHIPTGIVVQCQN 238
Query: 96 SRSLSENRKTARELLVA 112
RS +NR+ + L A
Sbjct: 239 ERSQIQNREMCMKYLRA 255
>gi|291288202|ref|YP_003505018.1| peptide chain release factor 1 [Denitrovibrio acetiphilus DSM
12809]
gi|290885362|gb|ADD69062.1| peptide chain release factor 1 [Denitrovibrio acetiphilus DSM
12809]
Length = 356
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 50/80 (62%), Gaps = 1/80 (1%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
I++KD++ R SG GGQ V T++ V +THIPTG+V+ C RS +NR+ A +LL +
Sbjct: 215 IEQKDLRIDVFRASGAGGQHVNTTDSAVRMTHIPTGVVVSCQDERSQIKNREKAMKLLKS 274
Query: 113 Q-WDVQVNGEDSLNAQIRRI 131
+ + ++ + S A R++
Sbjct: 275 KILEAEIQKKQSAEAASRKL 294
>gi|217077770|ref|YP_002335488.1| peptide chain release factor 1 [Thermosipho africanus TCF52B]
gi|419760369|ref|ZP_14286648.1| peptide chain release factor 1 [Thermosipho africanus H17ap60334]
gi|217037625|gb|ACJ76147.1| peptide chain release factor 1 [Thermosipho africanus TCF52B]
gi|407514472|gb|EKF49287.1| peptide chain release factor 1 [Thermosipho africanus H17ap60334]
Length = 358
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 44/72 (61%), Gaps = 5/72 (6%)
Query: 41 VSNIDIYSTIPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLS 100
VSN++I +I+ DI+ R SG GGQ V KT + V +THIPTGIV+ C RS
Sbjct: 203 VSNVEI-----EINPSDIRIDTYRASGAGGQYVNKTESAVRITHIPTGIVVTCQSERSQL 257
Query: 101 ENRKTARELLVA 112
+N++ A +L A
Sbjct: 258 QNKEQAMNILRA 269
>gi|57241933|ref|ZP_00369873.1| peptide chain release factor 2 [Campylobacter upsaliensis RM3195]
gi|57017125|gb|EAL53906.1| peptide chain release factor 2 [Campylobacter upsaliensis RM3195]
Length = 368
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 37/55 (67%)
Query: 56 KDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELL 110
KD++ F R SG GGQ V KT + V +THIPT IV++C RS +N+ TA ++L
Sbjct: 236 KDLRIDFYRASGAGGQHVNKTESAVRITHIPTNIVVQCQNDRSQHKNKATAFKML 290
>gi|297172547|gb|ADI23517.1| protein chain release factor B [uncultured Gemmatimonadales
bacterium HF0770_41L09]
Length = 331
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 39/60 (65%)
Query: 53 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
IDE D++ R SG GGQ V KT++ V +TH PTGIV C Q RS +N+ TA ++L A
Sbjct: 194 IDESDLRIDTYRASGAGGQHVNKTDSAVRITHEPTGIVATCQQERSQHKNKSTAMKMLRA 253
>gi|399037698|ref|ZP_10734373.1| peptide chain release factor 2 [Rhizobium sp. CF122]
gi|398064720|gb|EJL56396.1| peptide chain release factor 2 [Rhizobium sp. CF122]
Length = 342
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 55/102 (53%), Gaps = 10/102 (9%)
Query: 21 LESQVTITRELRNDGYHRNL-----VSNIDIYSTIP-----KIDEKDIQERFVRGSGPGG 70
L+++ + R +R Y N S+I +Y + +I+E D + R SG GG
Sbjct: 156 LKTESGVHRLVRISPYDSNARRHTSFSSIWVYPVVDDSINIEINESDCRIDTYRSSGAGG 215
Query: 71 QAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 112
Q V T++ V +THIPTGIV+ C Q RS +NR A ++L A
Sbjct: 216 QHVNTTDSAVRITHIPTGIVVACQQERSQHKNRAKAWDMLRA 257
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.318 0.133 0.381
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,383,935,497
Number of Sequences: 23463169
Number of extensions: 91772169
Number of successful extensions: 391028
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 8165
Number of HSP's successfully gapped in prelim test: 304
Number of HSP's that attempted gapping in prelim test: 382499
Number of HSP's gapped (non-prelim): 8607
length of query: 162
length of database: 8,064,228,071
effective HSP length: 123
effective length of query: 39
effective length of database: 9,473,225,580
effective search space: 369455797620
effective search space used: 369455797620
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 71 (32.0 bits)