Query psy2493
Match_columns 62
No_of_seqs 148 out of 1028
Neff 8.0
Searched_HMMs 29240
Date Fri Aug 16 17:38:30 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy2493.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/2493hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1w3w_A Annexin A8; coagulation 99.8 4.3E-22 1.5E-26 126.9 -2.2 62 1-62 247-308 (327)
2 1n00_A Annexin GH1; membrane-b 99.8 9.1E-22 3.1E-26 125.0 -0.9 62 1-62 240-301 (321)
3 1dm5_A Annexin XII E105K mutan 99.8 7.7E-22 2.6E-26 125.0 -2.4 62 1-62 237-298 (315)
4 1yii_A Annexin A5, annexin V, 99.8 3.9E-21 1.3E-25 121.9 -2.2 62 1-62 239-300 (320)
5 2hyv_A Annexin A2; calcium-bin 99.8 3.1E-21 1.1E-25 122.0 -2.8 62 1-62 68-129 (308)
6 3chj_A Alpha-14 giardin; calci 99.8 7E-21 2.4E-25 121.8 -2.4 61 2-62 76-136 (337)
7 1m9i_A Annexin VI; calcium-bin 99.8 7.6E-21 2.6E-25 129.8 -2.5 62 1-62 592-653 (672)
8 1hm6_A Annexin 1; phospholipid 99.8 4.8E-21 1.6E-25 122.9 -4.0 62 1-62 108-169 (346)
9 1axn_A Annexin III; annexin fa 99.8 9E-21 3.1E-25 120.5 -2.7 61 2-62 85-145 (323)
10 2zhj_A Annexin A4; zynogen gra 99.8 1.2E-20 4.3E-25 119.8 -2.2 62 1-62 242-303 (322)
11 2zhj_A Annexin A4; zynogen gra 99.7 2.4E-20 8.3E-25 118.5 -2.6 61 2-62 84-144 (322)
12 1hm6_A Annexin 1; phospholipid 99.7 3.4E-20 1.2E-24 118.9 -2.1 62 1-62 267-328 (346)
13 2hyv_A Annexin A2; calcium-bin 99.7 3.3E-20 1.1E-24 117.3 -2.2 62 1-62 228-289 (308)
14 1axn_A Annexin III; annexin fa 99.7 3.4E-20 1.2E-24 117.9 -2.4 62 1-62 243-304 (323)
15 1m9i_A Annexin VI; calcium-bin 99.7 2.3E-20 7.8E-25 127.4 -3.6 62 1-62 244-305 (672)
16 1n00_A Annexin GH1; membrane-b 99.7 9.3E-20 3.2E-24 115.7 -1.0 61 2-62 11-71 (321)
17 1dm5_A Annexin XII E105K mutan 99.7 5.9E-20 2E-24 116.4 -2.2 62 1-62 78-139 (315)
18 1yii_A Annexin A5, annexin V, 99.7 5.1E-20 1.7E-24 116.8 -2.7 61 2-62 81-141 (320)
19 1w3w_A Annexin A8; coagulation 99.7 9.6E-20 3.3E-24 116.1 -2.5 61 2-62 88-148 (327)
20 2ii2_A Alpha-11 giardin; helix 99.7 1.8E-19 6.2E-24 114.0 -2.5 61 1-62 69-129 (310)
21 4evf_A Alpha-1 giardin, giardi 99.7 1E-18 3.5E-23 109.8 -2.3 60 2-62 68-127 (295)
22 3chj_A Alpha-14 giardin; calci 99.6 6.8E-18 2.3E-22 108.0 -1.8 59 1-62 236-296 (337)
23 2ii2_A Alpha-11 giardin; helix 99.5 5.2E-17 1.8E-21 102.7 -4.3 58 1-62 225-285 (310)
24 4evf_A Alpha-1 giardin, giardi 99.5 3.3E-16 1.1E-20 98.4 -1.3 54 7-62 2-55 (295)
25 3fke_A Polymerase cofactor VP3 75.7 0.28 9.4E-06 27.2 -1.2 44 9-52 10-55 (129)
26 3ks4_A Polymerase cofactor VP3 71.8 0.41 1.4E-05 27.9 -1.2 44 9-52 65-110 (184)
27 3m1x_A Putative endoribonuclea 54.2 23 0.0008 19.6 4.0 41 14-54 79-120 (148)
28 3vcz_A Endoribonuclease L-PSP; 54.0 27 0.00092 19.5 4.9 43 13-55 78-121 (153)
29 1qu9_A YJGF protein; structura 53.7 24 0.00082 18.8 4.6 44 13-56 54-98 (128)
30 3i7t_A RV2704, putative unchar 48.9 32 0.0011 19.2 4.0 43 13-55 49-92 (149)
31 3gtz_A Putative translation in 48.5 20 0.00069 19.2 3.0 42 13-54 45-87 (124)
32 3kjj_A NMB1025 protein; YJGF p 48.0 20 0.0007 19.4 3.0 42 14-55 52-94 (128)
33 2dyy_A UPF0076 protein PH0854; 47.9 30 0.001 18.4 4.4 42 14-55 56-98 (126)
34 2b33_A Protein synthesis inhib 47.5 34 0.0012 18.8 4.0 43 13-55 67-110 (140)
35 2ewc_A Conserved hypothetical 47.1 29 0.001 18.6 3.5 42 13-54 46-88 (126)
36 1jd1_A Hypothetical 13.9 kDa p 46.9 23 0.00078 19.0 3.1 43 13-55 57-100 (129)
37 3r0p_A L-PSP putative endoribo 45.8 23 0.00078 18.9 3.0 41 14-54 58-99 (127)
38 3v4d_A Aminoacrylate peracid r 44.3 24 0.00082 19.1 2.9 41 14-54 63-104 (134)
39 3quw_A Protein MMF1; chorismat 44.3 25 0.00086 19.7 3.1 42 13-54 81-123 (153)
40 1qd9_A Purine regulatory prote 41.5 31 0.0011 18.3 3.1 43 13-55 53-96 (124)
41 1x25_A Hypothetical UPF0076 pr 39.9 31 0.0011 18.4 2.9 42 13-54 57-99 (128)
42 1pf5_A Hypothetical protein YJ 39.8 38 0.0013 18.1 3.3 41 14-54 58-100 (131)
43 2cvl_A TTHA0137, protein trans 39.4 33 0.0011 18.2 2.9 43 13-55 53-96 (124)
44 3frr_A Uncharacterized protein 39.4 11 0.00037 22.3 1.0 21 40-60 117-137 (191)
45 2xga_A Surface presentation of 38.8 22 0.00074 20.4 2.2 29 12-41 26-54 (153)
46 3lyb_A Putative endoribonuclea 37.9 40 0.0014 19.1 3.3 41 14-54 78-119 (165)
47 3ggy_A Increased sodium tolera 35.2 14 0.00048 21.9 1.0 21 40-60 123-143 (193)
48 1ry9_A SPA15 protein, surface 34.0 18 0.00062 20.5 1.3 30 11-41 17-46 (145)
49 3lme_A Possible translation in 33.8 59 0.002 17.6 3.5 42 14-55 57-100 (138)
50 3k12_A Uncharacterized protein 33.3 20 0.0007 19.1 1.5 41 14-54 44-85 (122)
51 2ou1_A Apolipoprotein A-II; hi 32.8 33 0.0011 17.3 2.1 22 40-61 5-29 (77)
52 3fap_B FRAP, FKBP12-rapamycin 32.6 31 0.0011 18.0 2.1 13 48-60 51-63 (94)
53 2fm8_A Surface presentation of 31.1 16 0.00056 20.4 0.9 28 12-40 6-33 (135)
54 1sgo_A HSPC210, protein C14ORF 30.3 30 0.001 19.5 1.9 20 42-61 111-130 (139)
55 3l7q_A Putative translation in 29.9 23 0.00079 18.9 1.3 41 14-54 55-96 (125)
56 4g6u_B EC869 CDII; beta-augmen 29.7 11 0.00038 22.1 0.0 29 32-60 144-173 (177)
57 1qah_A Perchloric acid soluble 27.5 37 0.0013 18.4 1.9 41 14-54 59-100 (136)
58 3i3f_A Hypothetical protein; s 26.9 58 0.002 17.7 2.7 40 14-54 66-110 (141)
59 1xrg_A Putative translation in 26.2 39 0.0013 18.9 1.9 41 14-54 87-128 (156)
60 2h8e_A Crossover junction endo 25.7 66 0.0023 16.9 2.7 28 11-38 73-102 (120)
61 2cwj_A Putative endonuclease; 25.6 27 0.00092 18.5 1.1 42 13-54 49-91 (123)
62 2npt_A Dual specificity mitoge 24.3 46 0.0016 17.7 1.8 22 32-54 67-88 (106)
63 2guz_B Mitochondrial import in 24.3 70 0.0024 15.3 2.5 31 17-55 4-34 (65)
64 2ig8_A Hypothetical protein PA 23.5 97 0.0033 16.7 3.8 40 14-53 62-102 (144)
65 1nh1_A Avirulence B protein; h 22.1 35 0.0012 21.7 1.2 27 35-61 47-73 (330)
66 3k0t_A Endoribonuclease L-PSP, 22.0 40 0.0014 18.5 1.4 41 14-54 73-114 (143)
67 2z16_A Matrix protein 1, M1; A 20.2 13 0.00044 21.3 -0.9 30 8-37 27-56 (165)
68 3rmr_A ATR1, avirulence protei 20.2 45 0.0015 19.9 1.4 24 6-30 174-197 (260)
No 1
>1w3w_A Annexin A8; coagulation, annexin family, calcium and phospholipid binding proteins; 1.99A {Homo sapiens} PDB: 1w45_A
Probab=99.81 E-value=4.3e-22 Score=126.87 Aligned_cols=62 Identities=50% Similarity=0.735 Sum_probs=59.4
Q ss_pred CceeeccchHHHHHHHHHHhhcCCCCcceeeEeeeeccccccchhhHHHHHHHHHHHHHhhC
Q psy2493 1 MIRCVRDKSAYLAQRLENAMAGMGTNDRTLIRIIVTRSEIDLGDIKQDYLKMYETTLEERIK 62 (62)
Q Consensus 1 iv~~~~~~~~~~a~~L~~a~kg~gt~e~~Li~il~~rs~~~l~~i~~~y~~~yg~~L~~~I~ 62 (62)
+|.|+.+|+.|||+.|++||+|+|||++.||||+++|++.||..|+++|+++||+||.++|+
T Consensus 247 lv~~~~~~~~~fA~~L~~amkg~GTdd~~LiriivsR~e~dl~~Ik~~y~~~yg~sL~~~I~ 308 (327)
T 1w3w_A 247 VVKCTQNLHSYFAERLYYAMKGAGTRDGTLIRNIVSRSEIDLNLIKCHFKKMYGKTLSSMIM 308 (327)
T ss_dssp HHHHHHCHHHHHHHHHHHHHSSSSCCHHHHHHHHHHHTTTTHHHHHHHHHHHHSSCHHHHHH
T ss_pred HHHHcCCHHHHHHHHHHhhccCCCCChhHeeeeeeECCHHHHHHHHHHHHHHhCCcHHHHHh
Confidence 46789999999999999999999999999999999999999999999999999999999874
No 2
>1n00_A Annexin GH1; membrane-binding, calcium-binding, membrane protein; 2.10A {Gossypium hirsutum} SCOP: a.65.1.1 PDB: 3brx_A 1ycn_A 2q4c_A 1dk5_A
Probab=99.81 E-value=9.1e-22 Score=124.96 Aligned_cols=62 Identities=27% Similarity=0.498 Sum_probs=59.5
Q ss_pred CceeeccchHHHHHHHHHHhhcCCCCcceeeEeeeeccccccchhhHHHHHHHHHHHHHhhC
Q psy2493 1 MIRCVRDKSAYLAQRLENAMAGMGTNDRTLIRIIVTRSEIDLGDIKQDYLKMYETTLEERIK 62 (62)
Q Consensus 1 iv~~~~~~~~~~a~~L~~a~kg~gt~e~~Li~il~~rs~~~l~~i~~~y~~~yg~~L~~~I~ 62 (62)
+|.|+.+|+.|||+.|++||+|.|||+..||||+++|++.||..|+++|+++||++|+++|+
T Consensus 240 iv~~~~~~~~~~A~~L~~am~g~Gtd~~~Liriiv~rse~dl~~Ik~~y~~~yg~sL~~~I~ 301 (321)
T 1n00_A 240 TVKCLVYPEKYFEKVLRLAINRRGTDEGALTRVVCTRAEVDLKVIADEYQRRNSVPLTRAIV 301 (321)
T ss_dssp HHHHHHCHHHHHHHHHHHHHTTCCSCTTHHHHHHHHHTTTTHHHHHHHHHHHHSSCHHHHTT
T ss_pred HHHHhcCchHHHHHHHHHHhccCCCCHHHHHHHHHHcCHHHHHHHHHHHHHHhCCChHHHHh
Confidence 36788999999999999999999999999999999999999999999999999999999985
No 3
>1dm5_A Annexin XII E105K mutant homohexamer; novel PH-dependent hexamerization switch E76, low calcium form; 1.93A {Hydra vulgaris} SCOP: a.65.1.1 PDB: 1aei_A
Probab=99.80 E-value=7.7e-22 Score=125.04 Aligned_cols=62 Identities=50% Similarity=0.844 Sum_probs=59.2
Q ss_pred CceeeccchHHHHHHHHHHhhcCCCCcceeeEeeeeccccccchhhHHHHHHHHHHHHHhhC
Q psy2493 1 MIRCVRDKSAYLAQRLENAMAGMGTNDRTLIRIIVTRSEIDLGDIKQDYLKMYETTLEERIK 62 (62)
Q Consensus 1 iv~~~~~~~~~~a~~L~~a~kg~gt~e~~Li~il~~rs~~~l~~i~~~y~~~yg~~L~~~I~ 62 (62)
+|.|+.+|+.|||+.|++||+|+|||++.||||+++|++.||..|+++|+++||++|+++|+
T Consensus 237 lv~~~~~~~~~~A~~L~~am~g~Gtd~~~Liriiv~rse~dl~~Ik~~y~~~yg~~L~~~I~ 298 (315)
T 1dm5_A 237 IVKSVENRFAYFAERLHHAMKGLGTSDKTLIRILVSRSEIDLANIKETFQAMYGKSLYEFIA 298 (315)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCTTCCCHHHHHHHHHHHTTTTHHHHHHHHHHHHSSCHHHHHH
T ss_pred HHHHhcCchHHHHHHHHHHhhcCCCCHHHHhHHHHhcCHHHHHHHHHHHHHHhCCcHHHHHh
Confidence 36788999999999999999999999999999999999999999999999999999999874
No 4
>1yii_A Annexin A5, annexin V, lipocortin V, endonexin II; membrane binding, matrix vessicle, protein and metal binding protein; 1.42A {Gallus gallus} PDB: 1yj0_A 1ala_A 1hvd_A 1anx_A 1anw_A 1avh_A 1avr_A 1hak_B* 1hvf_A 1hve_A 1hvg_A 1a8a_A* 1a8b_A* 2ie7_A 1g5n_A 2ie6_A 1bcz_A 1n41_A 1bcw_A 2ran_A ...
Probab=99.78 E-value=3.9e-21 Score=121.94 Aligned_cols=62 Identities=44% Similarity=0.783 Sum_probs=59.3
Q ss_pred CceeeccchHHHHHHHHHHhhcCCCCcceeeEeeeeccccccchhhHHHHHHHHHHHHHhhC
Q psy2493 1 MIRCVRDKSAYLAQRLENAMAGMGTNDRTLIRIIVTRSEIDLGDIKQDYLKMYETTLEERIK 62 (62)
Q Consensus 1 iv~~~~~~~~~~a~~L~~a~kg~gt~e~~Li~il~~rs~~~l~~i~~~y~~~yg~~L~~~I~ 62 (62)
+|+|+++|+.|||+.|++||+|+|||+..||||+++||+.||..|+++|+++||++|.++|+
T Consensus 239 lv~~~~~~~~~~A~~L~~a~~g~Gtd~~~Lirilv~Rse~dl~~Ik~~y~~~yg~~L~~~I~ 300 (320)
T 1yii_A 239 VVKCIRSVPAYFAETLYYSMKGAGTDDDTLIRVMVSRSEIDLLDIRHEFRKNFAKSLYQMIQ 300 (320)
T ss_dssp HHHHHHCHHHHHHHHHHHHHSSSSCCHHHHHHHHHHHTTTTHHHHHHHHHHHHSSCHHHHHH
T ss_pred HHHhccCCcHHHHHHHHHhhccCCCcHHHHHHHHHhcCHHHHHHHHHHHHHhcCCCHHHHHh
Confidence 46788999999999999999999999999999999999999999999999999999999874
No 5
>2hyv_A Annexin A2; calcium-binding protein, membrane-binding protein, helix BUN heparin, hexasaccharide, metal binding protein; HET: UAP SGN IDS; 1.42A {Homo sapiens} PDB: 2hyu_A* 2hyw_A 1w7b_A 1xjl_A
Probab=99.78 E-value=3.1e-21 Score=122.03 Aligned_cols=62 Identities=34% Similarity=0.629 Sum_probs=58.8
Q ss_pred CceeeccchHHHHHHHHHHhhcCCCCcceeeEeeeeccccccchhhHHHHHHHHHHHHHhhC
Q psy2493 1 MIRCVRDKSAYLAQRLENAMAGMGTNDRTLIRIIVTRSEIDLGDIKQDYLKMYETTLEERIK 62 (62)
Q Consensus 1 iv~~~~~~~~~~a~~L~~a~kg~gt~e~~Li~il~~rs~~~l~~i~~~y~~~yg~~L~~~I~ 62 (62)
++.++.+|+.+||+.|++||||+|||+.+||+|+|+||+.|+..|+++|++.||++|+++|+
T Consensus 68 l~~l~~~~~~~DA~~L~~AmkG~Gtde~~LieIL~~Rs~~q~~~Ik~aY~~~y~~~L~~di~ 129 (308)
T 2hyv_A 68 ILGLLKTPAQYDASELKASMKGLGTDEDSLIEIICSRTNQELQEINRVYKEMYKTDLEKDII 129 (308)
T ss_dssp HHHHHSCHHHHHHHHHHHHTSTTCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHSSCHHHHHH
T ss_pred HHHHcCCcHHHHHHHHHHHhhcCCCCHHHHHHHHhcCCHHHHHHHHHHHHHhhCCCHHHHHh
Confidence 35678899999999999999999999999999999999999999999999999999999874
No 6
>3chj_A Alpha-14 giardin; calcium-binding, annexin, metal binding protein; 1.60A {Giardia lamblia} PDB: 3chk_A 3chl_A
Probab=99.77 E-value=7e-21 Score=121.76 Aligned_cols=61 Identities=20% Similarity=0.500 Sum_probs=58.0
Q ss_pred ceeeccchHHHHHHHHHHhhcCCCCcceeeEeeeeccccccchhhHHHHHHHHHHHHHhhC
Q psy2493 2 IRCVRDKSAYLAQRLENAMAGMGTNDRTLIRIIVTRSEIDLGDIKQDYLKMYETTLEERIK 62 (62)
Q Consensus 2 v~~~~~~~~~~a~~L~~a~kg~gt~e~~Li~il~~rs~~~l~~i~~~y~~~yg~~L~~~I~ 62 (62)
+.++.+|+.|||+.|++||+|.|||+.+||+|+|+||+.|+..|+++|++.||++|+++|+
T Consensus 76 ~~l~~~p~~~dA~~L~~AmkG~GTde~~LieIl~tRs~~~l~~Ik~~Y~~~y~~sL~~di~ 136 (337)
T 3chj_A 76 LMLYKPRAQLLCELIRGATKGAGTDEKCLVDVLLTIETHEVREIRQLYYQLYNDSLGDVVR 136 (337)
T ss_dssp HHHTSCHHHHHHHHHHHHHSSSSCCHHHHHHHHTTSCHHHHHHHHHHHHHHHSSCHHHHHH
T ss_pred HHHhCChHHHHHHHHHHhccCCCCChHHhhhhhhcCCHHHHHHHHHHHHHHHhHHHHHHHH
Confidence 4567899999999999999999999999999999999999999999999999999999874
No 7
>1m9i_A Annexin VI; calcium-binding, membrane-binding, phosphorylation, mutant T356D, lipid binding protein; 2.65A {Homo sapiens} SCOP: a.65.1.1 a.65.1.1 PDB: 1avc_A
Probab=99.77 E-value=7.6e-21 Score=129.76 Aligned_cols=62 Identities=39% Similarity=0.791 Sum_probs=59.8
Q ss_pred CceeeccchHHHHHHHHHHhhcCCCCcceeeEeeeeccccccchhhHHHHHHHHHHHHHhhC
Q psy2493 1 MIRCVRDKSAYLAQRLENAMAGMGTNDRTLIRIIVTRSEIDLGDIKQDYLKMYETTLEERIK 62 (62)
Q Consensus 1 iv~~~~~~~~~~a~~L~~a~kg~gt~e~~Li~il~~rs~~~l~~i~~~y~~~yg~~L~~~I~ 62 (62)
||.|+.+|+.|||+.|++||+|.|||+..||||+++|++.||..|+.+|+++||++|.++|+
T Consensus 592 iv~~~~~~~~yfA~~L~~amkG~GT~d~~LiRiiVsR~eiDl~~Ik~~y~~~ygksL~~~I~ 653 (672)
T 1m9i_A 592 IVQSVKNKPLFFADKLYKSMKGAGTDDKTLTRIMVSRSEIDLLNIRREFIEKYDKSLHQAIE 653 (672)
T ss_dssp HHHHHHHHHHHHHHHHHHHTSSSSCCHHHHHHHHHHSTTTTHHHHHHHHHHHHSSCHHHHHH
T ss_pred HHHHhCCHHHHHHHHHHHHhccCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCHHHHHh
Confidence 47899999999999999999999999999999999999999999999999999999999884
No 8
>1hm6_A Annexin 1; phospholipid/Ca(2+)-binding protein, calcium-free form, FULL-length protein comprising protein core and N-terminal domain, metal; 1.80A {Sus scrofa} SCOP: a.65.1.1 PDB: 1mcx_A 1ain_A 1bo9_A
Probab=99.76 E-value=4.8e-21 Score=122.86 Aligned_cols=62 Identities=24% Similarity=0.462 Sum_probs=58.8
Q ss_pred CceeeccchHHHHHHHHHHhhcCCCCcceeeEeeeeccccccchhhHHHHHHHHHHHHHhhC
Q psy2493 1 MIRCVRDKSAYLAQRLENAMAGMGTNDRTLIRIIVTRSEIDLGDIKQDYLKMYETTLEERIK 62 (62)
Q Consensus 1 iv~~~~~~~~~~a~~L~~a~kg~gt~e~~Li~il~~rs~~~l~~i~~~y~~~yg~~L~~~I~ 62 (62)
++.++.+|+.+||+.|++||||+||||.+||+|+++||+.|+..|+++|++.||++|+++|+
T Consensus 108 l~~l~~~p~~~DA~~L~~AmkG~GTde~~LieIL~~Rsn~q~~~Ik~aY~~~y~~~Le~di~ 169 (346)
T 1hm6_A 108 ALALLKTPAQFDADELRAAMKGLGTDEDTLNEILASRTNREIREINRVYKEELKRDLAKDIT 169 (346)
T ss_dssp HHHHHSCHHHHHHHHHHHHHSSSCCCHHHHHHHHHHSCHHHHHHHHHHHHHTSCCCHHHHHH
T ss_pred HHHHhCCcHHHHHHHHHHHhhccCCCHHHHHHHHhcCCHHHHHHHHHHHHHHhchhHHHHHh
Confidence 35678899999999999999999999999999999999999999999999999999999874
No 9
>1axn_A Annexin III; annexin family, calcium/phospholipid-binding protein complex; 1.78A {Homo sapiens} SCOP: a.65.1.1 PDB: 1aii_A
Probab=99.76 E-value=9e-21 Score=120.53 Aligned_cols=61 Identities=33% Similarity=0.595 Sum_probs=58.1
Q ss_pred ceeeccchHHHHHHHHHHhhcCCCCcceeeEeeeeccccccchhhHHHHHHHHHHHHHhhC
Q psy2493 2 IRCVRDKSAYLAQRLENAMAGMGTNDRTLIRIIVTRSEIDLGDIKQDYLKMYETTLEERIK 62 (62)
Q Consensus 2 v~~~~~~~~~~a~~L~~a~kg~gt~e~~Li~il~~rs~~~l~~i~~~y~~~yg~~L~~~I~ 62 (62)
+.++.+|+.+||+.|++||+|+||||.+||+|+++||+.|+.+|+++|++.||++|+++|+
T Consensus 85 ~~l~~~p~~~DA~~L~~A~kG~Gtde~~lieIL~~Rs~~q~~~I~~aY~~~y~~~Le~di~ 145 (323)
T 1axn_A 85 VALVTPPAVFDAKQLKKSMKGAGTNEDALIEILTTRTSRQMKDISQAYYTVYKKSLGDDIS 145 (323)
T ss_dssp HHHHSCHHHHHHHHHHHHHCSSSCCHHHHHHHHHHSCHHHHHHHHHHHHHHHSSCHHHHHH
T ss_pred HHHhcCchHHHHHHHHHHhccCCCCHHHHhHHhcCCCHHHHHHHHHHHHHhhCcCHHHHHH
Confidence 4567899999999999999999999999999999999999999999999999999999874
No 10
>2zhj_A Annexin A4; zynogen granule, membrane binding protein, metal binding protein, calcium, calcium/phospholipid-binding; 1.35A {Rattus norvegicus} PDB: 2zhi_A 2zoc_A 1ann_A 1i4a_A 1aow_A
Probab=99.76 E-value=1.2e-20 Score=119.78 Aligned_cols=62 Identities=45% Similarity=0.878 Sum_probs=59.2
Q ss_pred CceeeccchHHHHHHHHHHhhcCCCCcceeeEeeeeccccccchhhHHHHHHHHHHHHHhhC
Q psy2493 1 MIRCVRDKSAYLAQRLENAMAGMGTNDRTLIRIIVTRSEIDLGDIKQDYLKMYETTLEERIK 62 (62)
Q Consensus 1 iv~~~~~~~~~~a~~L~~a~kg~gt~e~~Li~il~~rs~~~l~~i~~~y~~~yg~~L~~~I~ 62 (62)
+|+|.++|+.|||+.|++||+|+|||+..||||+++||+.||..|+++|+++||++|+++|+
T Consensus 242 lv~~~~~~~~~~A~~L~~a~~g~Gtde~~lirilv~Rs~~dl~~i~~~Y~~~yg~~L~~~I~ 303 (322)
T 2zhj_A 242 IVKCMRNKPAYFAERLYKSMKGLGTDDSTLIRVMVSRAEIDMLDIRANFKRLYGKSLYSFIK 303 (322)
T ss_dssp HHHHHHCHHHHHHHHHHHHHSSSSCCHHHHHHHHHHHTTTTHHHHHHHHHHHHSSCHHHHHH
T ss_pred HHHHhcCccHHHHHHHHHHhccCCCCHHHHHHHHHHcCHHHHHHHHHHHHHHhCCcHHHHHh
Confidence 46788999999999999999999999999999999999999999999999999999999874
No 11
>2zhj_A Annexin A4; zynogen granule, membrane binding protein, metal binding protein, calcium, calcium/phospholipid-binding; 1.35A {Rattus norvegicus} PDB: 2zhi_A 2zoc_A 1ann_A 1i4a_A 1aow_A
Probab=99.75 E-value=2.4e-20 Score=118.46 Aligned_cols=61 Identities=33% Similarity=0.514 Sum_probs=58.2
Q ss_pred ceeeccchHHHHHHHHHHhhcCCCCcceeeEeeeeccccccchhhHHHHHHHHHHHHHhhC
Q psy2493 2 IRCVRDKSAYLAQRLENAMAGMGTNDRTLIRIIVTRSEIDLGDIKQDYLKMYETTLEERIK 62 (62)
Q Consensus 2 v~~~~~~~~~~a~~L~~a~kg~gt~e~~Li~il~~rs~~~l~~i~~~y~~~yg~~L~~~I~ 62 (62)
+.++.+|+.+||+.|++||+|+||||.+||+|+++||+.|+.+|+++|++.||++|+++|+
T Consensus 84 ~~l~~~~~~~DA~~L~~A~kg~Gtde~~lieIL~~Rs~~ql~~I~~aY~~~y~~~Le~di~ 144 (322)
T 2zhj_A 84 LGMMTPTVLYDVQELRRAMKGAGTDEGCLIEILASRNPEEIRRINQTYQQQYGRSLEEDIC 144 (322)
T ss_dssp HHHHSCHHHHHHHHHHHHHSSSCCCHHHHHHHHHHSCHHHHHHHHHHHHHHHSSCHHHHHH
T ss_pred HHHcCCcHHHHHHHHHHhhhccCCCHHHHHHHHhcCCHHHHHHHHHHHHHHhCccHHHHHH
Confidence 5677899999999999999999999999999999999999999999999999999999874
No 12
>1hm6_A Annexin 1; phospholipid/Ca(2+)-binding protein, calcium-free form, FULL-length protein comprising protein core and N-terminal domain, metal; 1.80A {Sus scrofa} SCOP: a.65.1.1 PDB: 1mcx_A 1ain_A 1bo9_A
Probab=99.74 E-value=3.4e-20 Score=118.90 Aligned_cols=62 Identities=45% Similarity=0.810 Sum_probs=59.1
Q ss_pred CceeeccchHHHHHHHHHHhhcCCCCcceeeEeeeeccccccchhhHHHHHHHHHHHHHhhC
Q psy2493 1 MIRCVRDKSAYLAQRLENAMAGMGTNDRTLIRIIVTRSEIDLGDIKQDYLKMYETTLEERIK 62 (62)
Q Consensus 1 iv~~~~~~~~~~a~~L~~a~kg~gt~e~~Li~il~~rs~~~l~~i~~~y~~~yg~~L~~~I~ 62 (62)
+|+|.++|+.+||+.|++||+|+||||..||||+++||+.||..|+++|+++||++|+++|+
T Consensus 267 lv~~~r~~~~~~A~~L~~A~~g~GTde~~lirIlvsRs~~dL~~I~~~Y~~~yg~sL~~~I~ 328 (346)
T 1hm6_A 267 VVKCATSKPMFFAEKLHQAMKGIGTRHKTLIRIMVSRSEIDMNDIKACYQKLYGISLCQAIL 328 (346)
T ss_dssp HHHHHHCHHHHHHHHHHHHHSSSSCCHHHHHHHHHHTTTTTHHHHHHHHHHHHSSCHHHHHH
T ss_pred HHhhcCCccHHHHHHHHHHhcCCCCCHHHHhHHHhhCCHHHHHHHHHHHHHHhCCCHHHHHH
Confidence 36788999999999999999999999999999999999999999999999999999999884
No 13
>2hyv_A Annexin A2; calcium-binding protein, membrane-binding protein, helix BUN heparin, hexasaccharide, metal binding protein; HET: UAP SGN IDS; 1.42A {Homo sapiens} PDB: 2hyu_A* 2hyw_A 1w7b_A 1xjl_A
Probab=99.74 E-value=3.3e-20 Score=117.34 Aligned_cols=62 Identities=39% Similarity=0.766 Sum_probs=59.1
Q ss_pred CceeeccchHHHHHHHHHHhhcCCCCcceeeEeeeeccccccchhhHHHHHHHHHHHHHhhC
Q psy2493 1 MIRCVRDKSAYLAQRLENAMAGMGTNDRTLIRIIVTRSEIDLGDIKQDYLKMYETTLEERIK 62 (62)
Q Consensus 1 iv~~~~~~~~~~a~~L~~a~kg~gt~e~~Li~il~~rs~~~l~~i~~~y~~~yg~~L~~~I~ 62 (62)
+|.|.++|+.+||+.|++||+|.|||+..||+|+++||+.||..|+++|++.||++|+++|+
T Consensus 228 lv~~~~~~~~~~A~~L~~A~~g~GTde~~lirilv~Rs~~~l~~I~~~Y~~~yg~~L~~~I~ 289 (308)
T 2hyv_A 228 LVQCIQNKPLYFADRLYDSMKGKGTRDKVLIRIMVSRSEVDMLKIRSEFKRKYGKSLYYYIQ 289 (308)
T ss_dssp HHHHHHCHHHHHHHHHHHHHSSSSCCHHHHHHHHHHHTTTTHHHHHHHHHHHHSSCHHHHHH
T ss_pred HHhccCCCcHHHHHHHHHHhccCCCCHHHHHHHHHhcCHHHHHHHHHHHHHHhCCcHHHHHH
Confidence 36788999999999999999999999999999999999999999999999999999999874
No 14
>1axn_A Annexin III; annexin family, calcium/phospholipid-binding protein complex; 1.78A {Homo sapiens} SCOP: a.65.1.1 PDB: 1aii_A
Probab=99.74 E-value=3.4e-20 Score=117.88 Aligned_cols=62 Identities=48% Similarity=0.807 Sum_probs=59.1
Q ss_pred CceeeccchHHHHHHHHHHhhcCCCCcceeeEeeeeccccccchhhHHHHHHHHHHHHHhhC
Q psy2493 1 MIRCVRDKSAYLAQRLENAMAGMGTNDRTLIRIIVTRSEIDLGDIKQDYLKMYETTLEERIK 62 (62)
Q Consensus 1 iv~~~~~~~~~~a~~L~~a~kg~gt~e~~Li~il~~rs~~~l~~i~~~y~~~yg~~L~~~I~ 62 (62)
+|+|.++|+.++|+.|++||+|+|||+..||||+++||+.||..|+++|+++||++|+++|+
T Consensus 243 lv~~~r~~~~~~A~~L~~A~~g~GTde~~lirilv~Rs~~~L~~i~~~Y~~~yg~~L~~~I~ 304 (323)
T 1axn_A 243 IVNCVRNTPAFLAERLHRALKGIGTDEFTLNRIMVSRSEIDLLDIRTEFKKHYGYSLYSAIK 304 (323)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSSSSCCHHHHHHHHHHHTTTTHHHHHHHHHHHHSSCHHHHHH
T ss_pred HHHhcCCccHHHHHHHHHhcccCCCCHHHhhhhhhhCCHHHHHHHHHHHHHHcCCcHHHHHh
Confidence 46788899999999999999999999999999999999999999999999999999999874
No 15
>1m9i_A Annexin VI; calcium-binding, membrane-binding, phosphorylation, mutant T356D, lipid binding protein; 2.65A {Homo sapiens} SCOP: a.65.1.1 a.65.1.1 PDB: 1avc_A
Probab=99.74 E-value=2.3e-20 Score=127.42 Aligned_cols=62 Identities=47% Similarity=0.813 Sum_probs=59.5
Q ss_pred CceeeccchHHHHHHHHHHhhcCCCCcceeeEeeeeccccccchhhHHHHHHHHHHHHHhhC
Q psy2493 1 MIRCVRDKSAYLAQRLENAMAGMGTNDRTLIRIIVTRSEIDLGDIKQDYLKMYETTLEERIK 62 (62)
Q Consensus 1 iv~~~~~~~~~~a~~L~~a~kg~gt~e~~Li~il~~rs~~~l~~i~~~y~~~yg~~L~~~I~ 62 (62)
||+|+.+|+.|||+.|++||+|.|||++.||||+++|++.||..|+++|+++||++|.++|+
T Consensus 244 iv~c~~~~~~yfA~~L~~amkG~GTdd~~LiRiiVsR~e~Dl~~Ik~~y~~~yg~sL~~~I~ 305 (672)
T 1m9i_A 244 VVKCIRSTPEYFAERLFKAMKGLGTRDNTLIRIMVSRSELDMLDIREIFRTKYEKSLYSMIK 305 (672)
T ss_dssp HHHHHHHHHHHHHHHHHHTSSSSSCCHHHHHHHHHHTTTTTHHHHHHHHHHHSSSCHHHHHH
T ss_pred HHHHHCChHHHHHHHHHHHhccCCCChhhhhhHhhccCHHHHHHHHHHHHHHhCCcHHHHHH
Confidence 47799999999999999999999999999999999999999999999999999999999874
No 16
>1n00_A Annexin GH1; membrane-binding, calcium-binding, membrane protein; 2.10A {Gossypium hirsutum} SCOP: a.65.1.1 PDB: 3brx_A 1ycn_A 2q4c_A 1dk5_A
Probab=99.74 E-value=9.3e-20 Score=115.73 Aligned_cols=61 Identities=21% Similarity=0.332 Sum_probs=57.5
Q ss_pred ceeeccchHHHHHHHHHHhhcCCCCcceeeEeeeeccccccchhhHHHHHHHHHHHHHhhC
Q psy2493 2 IRCVRDKSAYLAQRLENAMAGMGTNDRTLIRIIVTRSEIDLGDIKQDYLKMYETTLEERIK 62 (62)
Q Consensus 2 v~~~~~~~~~~a~~L~~a~kg~gt~e~~Li~il~~rs~~~l~~i~~~y~~~yg~~L~~~I~ 62 (62)
+.+..+|+.+||+.|++||||+||||.+||+|+++|++.|+..|+++|++.||++|+++|+
T Consensus 11 ~~~~~~~~~~DA~~L~~A~kG~Gtde~~lieIL~~rs~~q~~~I~~aY~~~y~~~L~~dl~ 71 (321)
T 1n00_A 11 VPTTVPSVSEDCEQLRKAFSGWGTNEGLIIDILGHRNAEQRNLIRKTYAETYGEDLLKALD 71 (321)
T ss_dssp CCSSCCCHHHHHHHHHHHTSSSSCCHHHHHHHHTTCCHHHHHHHHHHHHHHHSSCHHHHHH
T ss_pred ecCCCCCHHHHHHHHHHHhCCCCCCHHHHHHHHcCCCHHHHHHHHHHHHHHHhhHHHHHHH
Confidence 4566789999999999999999999999999999999999999999999999999999874
No 17
>1dm5_A Annexin XII E105K mutant homohexamer; novel PH-dependent hexamerization switch E76, low calcium form; 1.93A {Hydra vulgaris} SCOP: a.65.1.1 PDB: 1aei_A
Probab=99.73 E-value=5.9e-20 Score=116.41 Aligned_cols=62 Identities=32% Similarity=0.577 Sum_probs=58.7
Q ss_pred CceeeccchHHHHHHHHHHhhcCCCCcceeeEeeeeccccccchhhHHHHHHHHHHHHHhhC
Q psy2493 1 MIRCVRDKSAYLAQRLENAMAGMGTNDRTLIRIIVTRSEIDLGDIKQDYLKMYETTLEERIK 62 (62)
Q Consensus 1 iv~~~~~~~~~~a~~L~~a~kg~gt~e~~Li~il~~rs~~~l~~i~~~y~~~yg~~L~~~I~ 62 (62)
++.++.+|+.+||..|++||+|+||||.+||+|+++||+.|+.+|+++|++.||++|+++|+
T Consensus 78 l~~l~~~~~~~dA~~L~~A~kg~Gtde~~lieIL~tRs~~ql~~i~~~Y~~~yg~~Le~dI~ 139 (315)
T 1dm5_A 78 ALALLRKPDEFLAEQLHAAMKGLGTDKNALIDILCTQSNAQIHAIKAAFKLLYKEDLEKEII 139 (315)
T ss_dssp HHHHHSCHHHHHHHHHHHHHHSSSCCHHHHHHHHSSCCHHHHHHHHHHHHHHHSSCHHHHHH
T ss_pred HHHHccChhHHHHHHHHHHhhcCCCchhhhhhhHhcCCHHHHHHHHHHHHHHhCccHHHHHH
Confidence 35678899999999999999999999999999999999999999999999999999999873
No 18
>1yii_A Annexin A5, annexin V, lipocortin V, endonexin II; membrane binding, matrix vessicle, protein and metal binding protein; 1.42A {Gallus gallus} PDB: 1yj0_A 1ala_A 1hvd_A 1anx_A 1anw_A 1avh_A 1avr_A 1hak_B* 1hvf_A 1hve_A 1hvg_A 1a8a_A* 1a8b_A* 2ie7_A 1g5n_A 2ie6_A 1bcz_A 1n41_A 1bcw_A 2ran_A ...
Probab=99.73 E-value=5.1e-20 Score=116.84 Aligned_cols=61 Identities=33% Similarity=0.625 Sum_probs=58.3
Q ss_pred ceeeccchHHHHHHHHHHhhcCCCCcceeeEeeeeccccccchhhHHHHHHHHHHHHHhhC
Q psy2493 2 IRCVRDKSAYLAQRLENAMAGMGTNDRTLIRIIVTRSEIDLGDIKQDYLKMYETTLEERIK 62 (62)
Q Consensus 2 v~~~~~~~~~~a~~L~~a~kg~gt~e~~Li~il~~rs~~~l~~i~~~y~~~yg~~L~~~I~ 62 (62)
+.++.+|+.+||..|++||+|+||||.+||+|+++||+.|+.+|+++|++.||++|+++|+
T Consensus 81 ~~l~~~~~~~DA~~L~~A~kg~Gtde~~lieIL~~Rs~~ql~~I~~aY~~~y~~~Le~di~ 141 (320)
T 1yii_A 81 VSLMRPARIFDAHALKHAIKGAGTNEKVLTEILASRTPAEVQNIKQVYMQEYEANLEDKIT 141 (320)
T ss_dssp HHHHSCHHHHHHHHHHHHHSSSSCCHHHHHHHHHHSCHHHHHHHHHHHHHHHSSCHHHHHH
T ss_pred HHHccChHHHHHHHHHHHhccCCCchHHHhHHHhcCCHHHHHHHHHHHHHhhCcCHHHHHH
Confidence 5678899999999999999999999999999999999999999999999999999999873
No 19
>1w3w_A Annexin A8; coagulation, annexin family, calcium and phospholipid binding proteins; 1.99A {Homo sapiens} PDB: 1w45_A
Probab=99.72 E-value=9.6e-20 Score=116.06 Aligned_cols=61 Identities=31% Similarity=0.549 Sum_probs=58.2
Q ss_pred ceeeccchHHHHHHHHHHhhcCCCCcceeeEeeeeccccccchhhHHHHHHHHHHHHHhhC
Q psy2493 2 IRCVRDKSAYLAQRLENAMAGMGTNDRTLIRIIVTRSEIDLGDIKQDYLKMYETTLEERIK 62 (62)
Q Consensus 2 v~~~~~~~~~~a~~L~~a~kg~gt~e~~Li~il~~rs~~~l~~i~~~y~~~yg~~L~~~I~ 62 (62)
+.++.+|+.+||..|++||+|+||||.+||+|+++||+.|+.+|+++|++.||++|+++|+
T Consensus 88 ~~l~~~~~~~DA~~L~~A~~g~Gtde~~lieIL~tRs~~ql~~i~~~Y~~~yg~sLe~dI~ 148 (327)
T 1w3w_A 88 VALMYPPYRYEAKELHDAMKGLGTKEGVIIEILASRTKNQLREIMKAYEEDYGSSLEEDIQ 148 (327)
T ss_dssp HHHHSCTTHHHHHHHHHHHHSSSCCHHHHHHHHHHSCHHHHHHHHHHHHHHHSSCHHHHHH
T ss_pred HHhcCCHHHHHHHHHHHHhhccCCCHHHHHHHHHhCCHHHHHHHHHHHHHHhCccHHHHHh
Confidence 5677899999999999999999999999999999999999999999999999999999873
No 20
>2ii2_A Alpha-11 giardin; helix-turn-helix, metal binding protein; 1.10A {Giardia intestinalis} PDB: 2iic_A
Probab=99.71 E-value=1.8e-19 Score=113.97 Aligned_cols=61 Identities=11% Similarity=0.085 Sum_probs=57.7
Q ss_pred CceeeccchHHHHHHHHHHhhcCCCCcceeeEeeeeccccccchhhHHHHHHHHHHHHHhhC
Q psy2493 1 MIRCVRDKSAYLAQRLENAMAGMGTNDRTLIRIIVTRSEIDLGDIKQDYLKMYETTLEERIK 62 (62)
Q Consensus 1 iv~~~~~~~~~~a~~L~~a~kg~gt~e~~Li~il~~rs~~~l~~i~~~y~~~yg~~L~~~I~ 62 (62)
++.++.+|+.+||..|++||+|+ |||.+||+|+|+||+.|+.+|+++|++.||++|+++|+
T Consensus 69 l~~l~~~p~~~DA~~L~~A~kg~-tde~~lieIL~~Rs~~~l~~I~~aY~~~y~~~Le~di~ 129 (310)
T 2ii2_A 69 MALGWDCNISARVNVIKKAMKNV-NDFRAIHDVVLIATPDERLKLAQAYKEKTGNDLLQDFV 129 (310)
T ss_dssp HHHHHSCHHHHHHHHHHHHHHSS-CCHHHHHHHHHSCCHHHHHHHHHHHHHHHSSCHHHHHH
T ss_pred HHHHhCCHHHHHHHHHHHHhhCC-CcHHHHHHHHHcCCHHHHHHHHHHHHHHHCcCHHHHHH
Confidence 35678899999999999999998 99999999999999999999999999999999999873
No 21
>4evf_A Alpha-1 giardin, giardin subunit alpha-1; annexin, calcium-binding protein, membrane-binding protein, binding protein; 1.90A {Giardia intestinalis} PDB: 4evh_A
Probab=99.67 E-value=1e-18 Score=109.81 Aligned_cols=60 Identities=17% Similarity=0.331 Sum_probs=57.0
Q ss_pred ceeeccchHHHHHHHHHHhhcCCCCcceeeEeeeeccccccchhhHHHHHHHHHHHHHhhC
Q psy2493 2 IRCVRDKSAYLAQRLENAMAGMGTNDRTLIRIIVTRSEIDLGDIKQDYLKMYETTLEERIK 62 (62)
Q Consensus 2 v~~~~~~~~~~a~~L~~a~kg~gt~e~~Li~il~~rs~~~l~~i~~~y~~~yg~~L~~~I~ 62 (62)
+.++.+|+.+||..|++||+|. |||.+||+|+++||+.|+.+|+++|++.||++|+++|+
T Consensus 68 ~~l~~~~~~~dA~~L~~A~kg~-tde~~lieIL~~Rs~~~l~~I~~~Y~~~y~~~Le~di~ 127 (295)
T 4evf_A 68 MDLFSDRHEVRAQHIRDALSGR-NDHMAFFDTVILCTPEDWHETVAAYTRMFKKPLVEDFM 127 (295)
T ss_dssp HHHTSCHHHHHHHHHHHHHHSS-CCHHHHHHHHTSCCHHHHHHHHHHHHHHHSSCHHHHHH
T ss_pred HHHccCchHHHHHHHHHHhhCC-CCHHHHHHHHHcCCHHHHHHHHHHHHHhccccHHHHHH
Confidence 5677899999999999999998 99999999999999999999999999999999999873
No 22
>3chj_A Alpha-14 giardin; calcium-binding, annexin, metal binding protein; 1.60A {Giardia lamblia} PDB: 3chk_A 3chl_A
Probab=99.64 E-value=6.8e-18 Score=107.96 Aligned_cols=59 Identities=25% Similarity=0.290 Sum_probs=55.6
Q ss_pred CceeeccchHHHHHHHHHHhhcCCCCcceeeEeeee--ccccccchhhHHHHHHHHHHHHHhhC
Q psy2493 1 MIRCVRDKSAYLAQRLENAMAGMGTNDRTLIRIIVT--RSEIDLGDIKQDYLKMYETTLEERIK 62 (62)
Q Consensus 1 iv~~~~~~~~~~a~~L~~a~kg~gt~e~~Li~il~~--rs~~~l~~i~~~y~~~yg~~L~~~I~ 62 (62)
+|.|+.+|+.|||+.|++||+|+|| +..||+++++ |++ |..|+.+|+++||++|+++|+
T Consensus 236 ~v~~~~~~~~~~A~~L~~am~g~GT-d~~Liriivs~~r~e--l~~Ik~~Y~~~yg~sL~~~I~ 296 (337)
T 3chj_A 236 AHDFLYDPCCAAAFSMNVAFAGSGS-DSNRLNRITAMHFRE--CKGCKYYYKKVYGQAFDERCA 296 (337)
T ss_dssp HHHHHHCHHHHHHHHHHHHTCSSSC-CHHHHHHHHHHHTTT--CTTHHHHHHHHHSSCHHHHHH
T ss_pred HHHhhcChHHHHHHHHHHHhcCCCc-hhhHhhhhhccchhh--HHHHHHHHHHHhCCcHHHHHH
Confidence 4678899999999999999999999 9999999999 888 999999999999999999874
No 23
>2ii2_A Alpha-11 giardin; helix-turn-helix, metal binding protein; 1.10A {Giardia intestinalis} PDB: 2iic_A
Probab=99.54 E-value=5.2e-17 Score=102.73 Aligned_cols=58 Identities=10% Similarity=-0.042 Sum_probs=52.8
Q ss_pred CceeeccchHHHHHHHHHHhhcCC--CCcceeeEeee-eccccccchhhHHHHHHHHHHHHHhhC
Q psy2493 1 MIRCVRDKSAYLAQRLENAMAGMG--TNDRTLIRIIV-TRSEIDLGDIKQDYLKMYETTLEERIK 62 (62)
Q Consensus 1 iv~~~~~~~~~~a~~L~~a~kg~g--t~e~~Li~il~-~rs~~~l~~i~~~y~~~yg~~L~~~I~ 62 (62)
+|.|+++|+.|||+.|++||+|+| ||+..|+||++ +|++. ..|+.+|++ || +|.++|+
T Consensus 225 iv~~~~~~~~~fA~~L~~Am~g~Gt~td~~~l~Riv~~~~~~~--~~ik~~Y~~-yg-~L~~~I~ 285 (310)
T 2ii2_A 225 AHYYNLAPARAVAYAFHSAVETQNDDMAYEQAARITGLFHDLH--KFAWVHYAC-WG-VMRDDIL 285 (310)
T ss_dssp HHHHHHCHHHHHHHHHHHHHTCSCHHHHHHHHHHHHHHHTTTT--TTHHHHHTT-TS-CHHHHHH
T ss_pred HHHHhCCHHHHHHHHHHHHHhCCCCCCcHHHHHHHHHHHhccH--HHHHHHHHH-hC-CHHHHHH
Confidence 467889999999999999999999 99999999998 55655 999999999 99 9999884
No 24
>4evf_A Alpha-1 giardin, giardin subunit alpha-1; annexin, calcium-binding protein, membrane-binding protein, binding protein; 1.90A {Giardia intestinalis} PDB: 4evh_A
Probab=99.53 E-value=3.3e-16 Score=98.42 Aligned_cols=54 Identities=22% Similarity=0.303 Sum_probs=51.4
Q ss_pred cchHHHHHHHHHHhhcCCCCcceeeEeeeeccccccchhhHHHHHHHHHHHHHhhC
Q psy2493 7 DKSAYLAQRLENAMAGMGTNDRTLIRIIVTRSEIDLGDIKQDYLKMYETTLEERIK 62 (62)
Q Consensus 7 ~~~~~~a~~L~~a~kg~gt~e~~Li~il~~rs~~~l~~i~~~y~~~yg~~L~~~I~ 62 (62)
+++..+|+.|++|||| |||.+||+|+++||+.|+..|+++|++.||++|+++|+
T Consensus 2 ~~~~~da~~L~~A~kG--tde~~li~IL~~rs~~qr~~I~~~Y~~~yg~~L~~~lk 55 (295)
T 4evf_A 2 PKVTDIANELKQAIDA--KDEVQIAFIASEYSAESREKIAKAYVASYGKELPDDIK 55 (295)
T ss_dssp CCHHHHHHHHHHHHHT--TCHHHHHHHHHTSCHHHHHHHHHHHHHHHSSCHHHHHH
T ss_pred CCHHHHHHHHHHHHcC--CCHHHHHHHHhCCCHHHHHHHHHHHHHHHCcCHHHHHH
Confidence 6788999999999996 99999999999999999999999999999999999874
No 25
>3fke_A Polymerase cofactor VP35; RNA binding domain, coiled coil, interferon antiviral system evasion, RNA replication, RNA-binding; 1.40A {Zaire ebolavirus - mayinga} PDB: 3l25_A 3l26_A 3l28_A 3l27_A 3l29_A 3l2a_A
Probab=75.67 E-value=0.28 Score=27.23 Aligned_cols=44 Identities=18% Similarity=0.320 Sum_probs=37.1
Q ss_pred hHHHHHHHHHHhhcCCCCcceeeEeee--eccccccchhhHHHHHH
Q psy2493 9 SAYLAQRLENAMAGMGTNDRTLIRIIV--TRSEIDLGDIKQDYLKM 52 (62)
Q Consensus 9 ~~~~a~~L~~a~kg~gt~e~~Li~il~--~rs~~~l~~i~~~y~~~ 52 (62)
++-+++.|++-+-|.||.-..|+.+++ ++++.+|..+...|++.
T Consensus 10 akdl~~il~~hLpG~~TaFH~Lvqvi~kvgkd~~~Ld~~h~~F~~~ 55 (129)
T 3fke_A 10 AKDLRNIMYDHLPGFGTAFHQLVQVICKLGKDSNSLDIIHAEFQAS 55 (129)
T ss_dssp HHHHHHHHHTTSSSSSCHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCchHHHHHHHHHHHccchhHHHHHHHHHHHH
Confidence 556788889999999999999998876 78888898888888764
No 26
>3ks4_A Polymerase cofactor VP35; RNA-binding protein, protein-RNA complex, interferon, HOST cytoplasm, interferon antiviral system evasion; 2.40A {Reston ebolavirus} PDB: 3ks8_A
Probab=71.83 E-value=0.41 Score=27.94 Aligned_cols=44 Identities=18% Similarity=0.329 Sum_probs=37.2
Q ss_pred hHHHHHHHHHHhhcCCCCcceeeEeee--eccccccchhhHHHHHH
Q psy2493 9 SAYLAQRLENAMAGMGTNDRTLIRIIV--TRSEIDLGDIKQDYLKM 52 (62)
Q Consensus 9 ~~~~a~~L~~a~kg~gt~e~~Li~il~--~rs~~~l~~i~~~y~~~ 52 (62)
+.-+++.|++-+-|.||.-..|+.++| ++++..|..+...|+..
T Consensus 65 akdl~~il~~HLpG~~TaFHqLvqvI~kvgkD~~~Ldi~h~eFqa~ 110 (184)
T 3ks4_A 65 AKDLKEIMYDHLPGFGTAFHQLVQVICKIGKDNNLLDTIHAEFQAS 110 (184)
T ss_dssp HHHHHHHHHHTCSSSSCHHHHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCchHHHHHHHHHHHccchhHHHHHHHHHHHH
Confidence 456788899999999999999998876 78888898888888754
No 27
>3m1x_A Putative endoribonuclease L-PSP; structural genomics, seattle structural genomics center for infectious disease, ssgcid, unknown function; HET: FLC; 1.20A {Entamoeba histolytica} PDB: 3m4s_A 3mqw_A*
Probab=54.17 E-value=23 Score=19.64 Aligned_cols=41 Identities=12% Similarity=0.248 Sum_probs=27.4
Q ss_pred HHHHHHhhcCCCCcceeeEeee-eccccccchhhHHHHHHHH
Q psy2493 14 QRLENAMAGMGTNDRTLIRIIV-TRSEIDLGDIKQDYLKMYE 54 (62)
Q Consensus 14 ~~L~~a~kg~gt~e~~Li~il~-~rs~~~l~~i~~~y~~~yg 54 (62)
..|...++..|.+-+.++++.+ -++..++..+.+.|.+.||
T Consensus 79 ~nl~aiL~~aG~~l~~Vvk~tvyl~d~~df~~~n~v~~~~fg 120 (148)
T 3m1x_A 79 TNLKYVLEEAGSSMDKVVKTTCLLADIKDFGVFNGIYAEAFG 120 (148)
T ss_dssp HHHHHHHHHTTCCGGGEEEEEEEESCGGGHHHHHHHHHHHHT
T ss_pred HHHHHHHHHcCCCHHHEEEEEEEECCHHHHHHHHHHHHHHhC
Confidence 4455566666666666665533 2455678889999988887
No 28
>3vcz_A Endoribonuclease L-PSP; virulence, pathogenesis, infectious diseases, center for STR genomics of infectious diseases, csgid, translation; HET: GOL; 1.80A {Vibrio vulnificus}
Probab=54.01 E-value=27 Score=19.51 Aligned_cols=43 Identities=12% Similarity=0.361 Sum_probs=29.8
Q ss_pred HHHHHHHhhcCCCCcceeeEeee-eccccccchhhHHHHHHHHH
Q psy2493 13 AQRLENAMAGMGTNDRTLIRIIV-TRSEIDLGDIKQDYLKMYET 55 (62)
Q Consensus 13 a~~L~~a~kg~gt~e~~Li~il~-~rs~~~l~~i~~~y~~~yg~ 55 (62)
...|...++..|.+-+.++++.+ -++..++..+.+.|.+.||.
T Consensus 78 l~nl~a~L~~aG~~l~~Vvk~tvyl~d~~df~~~n~v~~~~f~~ 121 (153)
T 3vcz_A 78 LDNVKAVVEASGLTVGDIVKMTVFVKDLNDFGTVNEVYGNFFDE 121 (153)
T ss_dssp HHHHHHHHHTTTCCGGGEEEEEEEESCGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHEEEEEEEEcCchHHHHHHHHHHHHhCC
Confidence 34556677777777776665533 24556788899999988875
No 29
>1qu9_A YJGF protein; structural genomics; HET: CSP; 1.20A {Escherichia coli} SCOP: d.79.1.1 PDB: 1j7h_A 2uyk_A 2uyj_A 2uyn_A* 2uyp_A
Probab=53.70 E-value=24 Score=18.84 Aligned_cols=44 Identities=9% Similarity=0.271 Sum_probs=29.0
Q ss_pred HHHHHHHhhcCCCCcceeeEeee-eccccccchhhHHHHHHHHHH
Q psy2493 13 AQRLENAMAGMGTNDRTLIRIIV-TRSEIDLGDIKQDYLKMYETT 56 (62)
Q Consensus 13 a~~L~~a~kg~gt~e~~Li~il~-~rs~~~l~~i~~~y~~~yg~~ 56 (62)
-+.|...++..|.+-+.++++.+ -++..++..+.+.|.+.||..
T Consensus 54 l~ni~~~L~~ag~~~~~vvk~~vyl~d~~~~~~~n~~~~~~f~~~ 98 (128)
T 1qu9_A 54 LDNVKAIVEAAGLKVGDIVKTTVFVKDLNDFATVNATYEAFFTEH 98 (128)
T ss_dssp HHHHHHHHHHTTCCGGGEEEEEEEESCGGGHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHcCCCHHHEEEEEEEEcCHHHHHHHHHHHHHHcCCC
Confidence 34455666766766666665433 245578888999998888753
No 30
>3i7t_A RV2704, putative uncharacterized protein; siras, YJGF/YER057C/UK114, homotrimer, quick SOAK NAI deriva unknown function; 1.93A {Mycobacterium tuberculosis}
Probab=48.90 E-value=32 Score=19.21 Aligned_cols=43 Identities=12% Similarity=0.192 Sum_probs=28.3
Q ss_pred HHHHHHHhhcCCCCcceeeEeee-eccccccchhhHHHHHHHHH
Q psy2493 13 AQRLENAMAGMGTNDRTLIRIIV-TRSEIDLGDIKQDYLKMYET 55 (62)
Q Consensus 13 a~~L~~a~kg~gt~e~~Li~il~-~rs~~~l~~i~~~y~~~yg~ 55 (62)
-..|...++..|.+-+.++++.+ -++..++..+.+.|.+.||.
T Consensus 49 l~ni~aiL~~aG~~l~dVvk~tvyl~d~~df~~~n~v~~~~f~~ 92 (149)
T 3i7t_A 49 LRRIEIALGQAGATLADVVRTRIYVTDISRWREVGEVHAQAFGK 92 (149)
T ss_dssp HHHHHHHHHHTTCCGGGEEEEEEEESCGGGHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHccCCHhHEEEEEEEECCHHHHHHHHHHHHHHcCC
Confidence 34555666666766666654433 24556788899999888873
No 31
>3gtz_A Putative translation initiation inhibitor; structural genomics, unknown function, PSI-2, protein struct initiative; 2.50A {Salmonella typhimurium}
Probab=48.46 E-value=20 Score=19.21 Aligned_cols=42 Identities=5% Similarity=0.230 Sum_probs=27.1
Q ss_pred HHHHHHHhhcCCCCcceeeEeee-eccccccchhhHHHHHHHH
Q psy2493 13 AQRLENAMAGMGTNDRTLIRIIV-TRSEIDLGDIKQDYLKMYE 54 (62)
Q Consensus 13 a~~L~~a~kg~gt~e~~Li~il~-~rs~~~l~~i~~~y~~~yg 54 (62)
...|...++..|.+-..++++.+ -++..++..+.+.|.+.||
T Consensus 45 l~nl~~~L~~aG~~~~~Vvk~tvyl~d~~df~~~n~v~~~~f~ 87 (124)
T 3gtz_A 45 LAQIDAVLEKQGSSKSRILDATIFLSDKADFAAMNKAWDAWVV 87 (124)
T ss_dssp HHHHHHHHHHTTCCGGGEEEEEEEESCGGGHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHcCCCHHHEEEEEEEECCHHHHHHHHHHHHHHhC
Confidence 34455666666766555554433 2455678888888888776
No 32
>3kjj_A NMB1025 protein; YJGF protein family, OPPF, structural genomics, oxford protein production facility, UN function; 1.90A {Neisseria meningitidis serogroup B} PDB: 3kjk_A
Probab=47.97 E-value=20 Score=19.37 Aligned_cols=42 Identities=10% Similarity=0.236 Sum_probs=27.4
Q ss_pred HHHHHHhhcCCCCcceeeEeee-eccccccchhhHHHHHHHHH
Q psy2493 14 QRLENAMAGMGTNDRTLIRIIV-TRSEIDLGDIKQDYLKMYET 55 (62)
Q Consensus 14 ~~L~~a~kg~gt~e~~Li~il~-~rs~~~l~~i~~~y~~~yg~ 55 (62)
..|...++..|.+-+.++++.+ -++..++..+.+.|.+.||.
T Consensus 52 ~nl~~~L~~aG~~l~~Vvk~tvyl~d~~df~~~n~v~~~~f~~ 94 (128)
T 3kjj_A 52 AQIDRWLAECGSDKAHVLDAVIYLRDMGDYAEMNGVWDAWVAA 94 (128)
T ss_dssp HHHHHHHHHTTCCGGGEEEEEEEESCGGGHHHHHHHHHHHSCT
T ss_pred HHHHHHHHHcCCCHHHEEEEEEEECCHHHHHHHHHHHHHHhCC
Confidence 4455666666766666665433 24556788888888888763
No 33
>2dyy_A UPF0076 protein PH0854; putative translation initiation inhibitor, trimer, structural genomics, NPPSFA; 2.60A {Pyrococcus horikoshii}
Probab=47.90 E-value=30 Score=18.35 Aligned_cols=42 Identities=12% Similarity=0.339 Sum_probs=27.0
Q ss_pred HHHHHHhhcCCCCcceeeEeee-eccccccchhhHHHHHHHHH
Q psy2493 14 QRLENAMAGMGTNDRTLIRIIV-TRSEIDLGDIKQDYLKMYET 55 (62)
Q Consensus 14 ~~L~~a~kg~gt~e~~Li~il~-~rs~~~l~~i~~~y~~~yg~ 55 (62)
..+...++..|.+-+.++++.+ -++..++..+.+.|.+.||.
T Consensus 56 ~ni~~~L~~ag~~~~~vvk~~vyl~d~~~~~~~n~~~~~~f~~ 98 (126)
T 2dyy_A 56 ENIKAILEAAGYSLNDVIKVTVYLKDMNDFAKMNEVYAEYFGE 98 (126)
T ss_dssp HHHHHHHHHTTCCGGGEEEEEEEECC-CCTTHHHHHHHHHHTT
T ss_pred HHHHHHHHHcCCCHHHEEEEEEEEcCHHHHHHHHHHHHHHcCC
Confidence 4455566666666555654433 24557888999999888874
No 34
>2b33_A Protein synthesis inhibitor, putative; putative endoribonuclease, STRU genomics, joint center for structural genomics, JCSG; 2.30A {Thermotoga maritima} SCOP: d.79.1.1
Probab=47.47 E-value=34 Score=18.76 Aligned_cols=43 Identities=14% Similarity=0.265 Sum_probs=28.1
Q ss_pred HHHHHHHhhcCCCCcceeeEeee-eccccccchhhHHHHHHHHH
Q psy2493 13 AQRLENAMAGMGTNDRTLIRIIV-TRSEIDLGDIKQDYLKMYET 55 (62)
Q Consensus 13 a~~L~~a~kg~gt~e~~Li~il~-~rs~~~l~~i~~~y~~~yg~ 55 (62)
...|...++..|.+-+.++++.+ -++..++..+.+.|.+.||.
T Consensus 67 l~ni~~~L~~aG~~l~~Vvk~tvyl~d~~df~~~n~v~~~~f~~ 110 (140)
T 2b33_A 67 LENLKAILEAGGFSLKDVVKVTVFTTSMDYFQRVNEVYSRYFGD 110 (140)
T ss_dssp HHHHHHHHHHTTCCGGGEEEEEEEESCGGGHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHcCCCHHHEEEEEEEECCchhHHHHHHHHHHHCCC
Confidence 34455666766766666665433 24557788888889888864
No 35
>2ewc_A Conserved hypothetical protein; YJGF proteins family, COG025 putative translation initiation inhibitor; 2.15A {Streptococcus pyogenes} SCOP: d.79.1.1
Probab=47.07 E-value=29 Score=18.60 Aligned_cols=42 Identities=10% Similarity=0.156 Sum_probs=27.5
Q ss_pred HHHHHHHhhcCCCCcceeeEeee-eccccccchhhHHHHHHHH
Q psy2493 13 AQRLENAMAGMGTNDRTLIRIIV-TRSEIDLGDIKQDYLKMYE 54 (62)
Q Consensus 13 a~~L~~a~kg~gt~e~~Li~il~-~rs~~~l~~i~~~y~~~yg 54 (62)
-..|...++..|.+-+.++++.+ -++..++..+.+.|.+.|+
T Consensus 46 l~ni~~~L~~aG~~l~~Vvk~~vyl~d~~df~~~n~v~~~~f~ 88 (126)
T 2ewc_A 46 FDEMERRLALVGLTLDAVVQMDCLFRDVWNIPVMEKMIKERFN 88 (126)
T ss_dssp HHHHHHHHHTTTCCGGGEEEEEEEESSGGGHHHHHHHHHHHST
T ss_pred HHHHHHHHHHcCCCHHHEEEEEEEECChhHHHHHHHHHHHHcC
Confidence 34556667777766666665433 2455778888888888775
No 36
>1jd1_A Hypothetical 13.9 kDa protein in FCY2-PET117 intergenic region; translation inhibitor, structural genomics, PSI; 1.70A {Saccharomyces cerevisiae} SCOP: d.79.1.1
Probab=46.85 E-value=23 Score=18.99 Aligned_cols=43 Identities=12% Similarity=0.290 Sum_probs=27.8
Q ss_pred HHHHHHHhhcCCCCcceeeEeee-eccccccchhhHHHHHHHHH
Q psy2493 13 AQRLENAMAGMGTNDRTLIRIIV-TRSEIDLGDIKQDYLKMYET 55 (62)
Q Consensus 13 a~~L~~a~kg~gt~e~~Li~il~-~rs~~~l~~i~~~y~~~yg~ 55 (62)
...|...++..|.+-+.++++.+ -++..++..+.+.|.+.||.
T Consensus 57 l~ni~~~L~~aG~~~~~vvk~~vyl~d~~d~~~~n~~~~~~f~~ 100 (129)
T 1jd1_A 57 IQNIKNVLEASNSSLDRVVKVNIFLADINHFAEFNSVYAKYFNT 100 (129)
T ss_dssp HHHHHHHHHHTTCCGGGEEEEEEEESCGGGHHHHHHHHHHHSSS
T ss_pred HHHHHHHHHHcCCCHHHeEEEEEEEcChHHHHHHHHHHHHHcCC
Confidence 34455566666766666665433 24556788888888887753
No 37
>3r0p_A L-PSP putative endoribonuclease; hydrolase; 1.90A {Uncultured organism} SCOP: d.79.1.0
Probab=45.81 E-value=23 Score=18.91 Aligned_cols=41 Identities=10% Similarity=0.196 Sum_probs=26.7
Q ss_pred HHHHHHhhcCCCCcceeeEeee-eccccccchhhHHHHHHHH
Q psy2493 14 QRLENAMAGMGTNDRTLIRIIV-TRSEIDLGDIKQDYLKMYE 54 (62)
Q Consensus 14 ~~L~~a~kg~gt~e~~Li~il~-~rs~~~l~~i~~~y~~~yg 54 (62)
..|...++..|.+-+.++++.+ -++..++..+.+.|.+.||
T Consensus 58 ~ni~~~L~~ag~~l~~vvk~~vyl~d~~~~~~~~~v~~~~f~ 99 (127)
T 3r0p_A 58 KNLRAVCEAAGGGLRDIVKLNVYLTDLANFPIVNEVMGQYFQ 99 (127)
T ss_dssp HHHHHHHHHTTSCGGGEEEEEEEESCGGGHHHHHHHHHHHCC
T ss_pred HHHHHHHHHhCCCHHHEEEEEEEEcCHHHHHHHHHHHHHHcC
Confidence 4455566666766666665533 2455678888888887775
No 38
>3v4d_A Aminoacrylate peracid reductase RUTC; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 1.95A {Escherichia coli O6}
Probab=44.32 E-value=24 Score=19.05 Aligned_cols=41 Identities=7% Similarity=0.145 Sum_probs=26.7
Q ss_pred HHHHHHhhcCCCCcceeeEeee-eccccccchhhHHHHHHHH
Q psy2493 14 QRLENAMAGMGTNDRTLIRIIV-TRSEIDLGDIKQDYLKMYE 54 (62)
Q Consensus 14 ~~L~~a~kg~gt~e~~Li~il~-~rs~~~l~~i~~~y~~~yg 54 (62)
..|...++..|.+-+.++++.+ -++..++..+.+.|.+.||
T Consensus 63 ~nl~~~L~~aG~~l~~vvk~~vyl~d~~~f~~~n~v~~~~f~ 104 (134)
T 3v4d_A 63 ETIRKVIETAGGTMADVTFNSIFITDWKNYAAINEIYAEFFP 104 (134)
T ss_dssp HHHHHHHHHTTCCGGGEEEEEEEESCGGGHHHHHHHHHHHCC
T ss_pred HHHHHHHHHcCCCHHHeEEEEEEECCHHHHHHHHHHHHHHcC
Confidence 3455566666766666665533 2455678888888888776
No 39
>3quw_A Protein MMF1; chorismate mutase fold, intact mitochondria maintenance, mitochondrial protein, protein binding; 1.75A {Saccharomyces cerevisiae}
Probab=44.30 E-value=25 Score=19.71 Aligned_cols=42 Identities=14% Similarity=0.287 Sum_probs=27.6
Q ss_pred HHHHHHHhhcCCCCcceeeEeee-eccccccchhhHHHHHHHH
Q psy2493 13 AQRLENAMAGMGTNDRTLIRIIV-TRSEIDLGDIKQDYLKMYE 54 (62)
Q Consensus 13 a~~L~~a~kg~gt~e~~Li~il~-~rs~~~l~~i~~~y~~~yg 54 (62)
...|...++..|.+-+.++++.+ -++..++..+.+.|.+.||
T Consensus 81 l~Ni~a~L~~aG~~l~dVVkvtvyl~d~~df~~~n~v~~~~f~ 123 (153)
T 3quw_A 81 FQNVKNILAESNSSLDNIVKVNVFLADMKNFAEFNSVYAKHFH 123 (153)
T ss_dssp HHHHHHHHHHTTCCGGGEEEEEEEESCGGGHHHHHHHHHHHSS
T ss_pred HHHHHHHHHHcCCCHHHEEEEEEEECCHHHHHHHHHHHHHHcC
Confidence 34455566666766666665433 2455688888888888776
No 40
>1qd9_A Purine regulatory protein YABJ; perchloric acid soluble protein, purine regulation, YJGF/YER057C family, gene regulation; 1.70A {Bacillus subtilis} SCOP: d.79.1.1
Probab=41.53 E-value=31 Score=18.29 Aligned_cols=43 Identities=14% Similarity=0.304 Sum_probs=27.1
Q ss_pred HHHHHHHhhcCCCCcceeeEeee-eccccccchhhHHHHHHHHH
Q psy2493 13 AQRLENAMAGMGTNDRTLIRIIV-TRSEIDLGDIKQDYLKMYET 55 (62)
Q Consensus 13 a~~L~~a~kg~gt~e~~Li~il~-~rs~~~l~~i~~~y~~~yg~ 55 (62)
.+.+...++..|.+-+.++++.+ -++..++..+.+.|.+.||.
T Consensus 53 l~ni~~~L~~ag~~~~~vvk~~vyl~d~~~~~~~n~~~~~~f~~ 96 (124)
T 1qd9_A 53 FSNLKAVLEEAGASFETVVKATVFIADMEQFAEVNEVYGQYFDT 96 (124)
T ss_dssp HHHHHHHHHHTTCCGGGEEEEEEEESCGGGHHHHHHHHHHHSSS
T ss_pred HHHHHHHHHHcCCCHHHEEEEEEEEcChHHHHHHHHHHHHHcCC
Confidence 34455666666766666665433 24456788888888877753
No 41
>1x25_A Hypothetical UPF0076 protein ST0811; YJGF-like protein, archaea, structural genomics, UNK function; 2.00A {Sulfolobus tokodaii} SCOP: d.79.1.1
Probab=39.94 E-value=31 Score=18.39 Aligned_cols=42 Identities=10% Similarity=0.187 Sum_probs=26.7
Q ss_pred HHHHHHHhhcCCCCcceeeEeee-eccccccchhhHHHHHHHH
Q psy2493 13 AQRLENAMAGMGTNDRTLIRIIV-TRSEIDLGDIKQDYLKMYE 54 (62)
Q Consensus 13 a~~L~~a~kg~gt~e~~Li~il~-~rs~~~l~~i~~~y~~~yg 54 (62)
.+.+...++..|.+-+.++++.+ -++..++..+.+.|.+.|+
T Consensus 57 l~ni~~~L~~ag~~l~~vvk~~vyl~d~~~~~~~n~~~~~~f~ 99 (128)
T 1x25_A 57 LDNIKEIVKAAGFSLSDVAMAFVFLKDMNMFNDFNSVYAEYFK 99 (128)
T ss_dssp HHHHHHHHHHTTCCGGGEEEEEEEESCGGGHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHhCCCHHHEEEEEEEECCHHHHHHHHHHHHHHcC
Confidence 34455666766766555665433 2445678888888887775
No 42
>1pf5_A Hypothetical protein YJGH; structural genomics, beta barrel, PSI, protein structure INI midwest center for structural genomics, MCSG; 2.50A {Escherichia coli} SCOP: d.79.1.1
Probab=39.80 E-value=38 Score=18.10 Aligned_cols=41 Identities=15% Similarity=0.228 Sum_probs=27.2
Q ss_pred HHHHHHhhcCCCCcceeeEeee-eccc-cccchhhHHHHHHHH
Q psy2493 14 QRLENAMAGMGTNDRTLIRIIV-TRSE-IDLGDIKQDYLKMYE 54 (62)
Q Consensus 14 ~~L~~a~kg~gt~e~~Li~il~-~rs~-~~l~~i~~~y~~~yg 54 (62)
..|...++..|.+-+.++++.+ -++. .++..+.+.|.+.||
T Consensus 58 ~ni~~~L~~aG~~~~~vvk~~vyl~d~~~~~~~~~~~~~~~f~ 100 (131)
T 1pf5_A 58 DNLHATLAAAGCTFDDIIDVTSFHTDPENQFEDIMTVKNEIFS 100 (131)
T ss_dssp HHHHHHHHTTTCCGGGEEEEEEEESSGGGTHHHHHHHHHHHSC
T ss_pred HHHHHHHHHcCCCHHHEEEEEEEEcCcHHhHHHHHHHHHHHcC
Confidence 4455667777777666665433 2343 688888888888775
No 43
>2cvl_A TTHA0137, protein translation initiation inhibitor; structural genomics, NPPSFA; 1.65A {Thermus thermophilus} SCOP: d.79.1.1 PDB: 2csl_A 2cw4_A
Probab=39.39 E-value=33 Score=18.18 Aligned_cols=43 Identities=9% Similarity=0.251 Sum_probs=26.9
Q ss_pred HHHHHHHhhcCCCCcceeeEeee-eccccccchhhHHHHHHHHH
Q psy2493 13 AQRLENAMAGMGTNDRTLIRIIV-TRSEIDLGDIKQDYLKMYET 55 (62)
Q Consensus 13 a~~L~~a~kg~gt~e~~Li~il~-~rs~~~l~~i~~~y~~~yg~ 55 (62)
...|...++..|.+-+.++++.+ -++..++..+.+.|.+.||.
T Consensus 53 l~ni~~~L~~ag~~~~~vvk~~vyl~d~~~~~~~~~~~~~~f~~ 96 (124)
T 2cvl_A 53 MENLKAVLEAAGSGLSRVVQTTCFLADMEDFPGFNEVYARYFTP 96 (124)
T ss_dssp HHHHHHHHHHTTCCGGGEEEEEEEESCGGGHHHHHHHHHHHCCS
T ss_pred HHHHHHHHHHcCCCHHHEEEEEEEEcChHHHHHHHHHHHHHcCC
Confidence 34455566666666555665433 24456788888888877753
No 44
>3frr_A Uncharacterized protein KIAA0174; ESCRT, ESCRT-III, CHMP, IST1, alternative splicing, phosphoprotein, protein binding; 1.80A {Homo sapiens} PDB: 3frs_A
Probab=39.38 E-value=11 Score=22.29 Aligned_cols=21 Identities=10% Similarity=0.135 Sum_probs=18.3
Q ss_pred cccchhhHHHHHHHHHHHHHh
Q psy2493 40 IDLGDIKQDYLKMYETTLEER 60 (62)
Q Consensus 40 ~~l~~i~~~y~~~yg~~L~~~ 60 (62)
.+|..|++.|..+||+++...
T Consensus 117 pEL~~ir~~l~~KyGkeF~~~ 137 (191)
T 3frr_A 117 AELKIVADQLCAKYSKEYGKL 137 (191)
T ss_dssp HHHHHHHHHHHHHHCHHHHHH
T ss_pred hHHHHHHHHHHHHhCHHHHHH
Confidence 578899999999999998754
No 45
>2xga_A Surface presentation of antigens protein SPAK; chaperone, virulence factor; HET: MTN; 2.30A {Shigella flexneri}
Probab=38.76 E-value=22 Score=20.39 Aligned_cols=29 Identities=17% Similarity=0.298 Sum_probs=20.4
Q ss_pred HHHHHHHHhhcCCCCcceeeEeeeeccccc
Q psy2493 12 LAQRLENAMAGMGTNDRTLIRIIVTRSEID 41 (62)
Q Consensus 12 ~a~~L~~a~kg~gt~e~~Li~il~~rs~~~ 41 (62)
.++.+++++...|.+.+.+-. +-.+|...
T Consensus 26 iv~Lv~~~L~~~Gc~~dli~~-LD~HSTI~ 54 (153)
T 2xga_A 26 LVQLVRDSLFTIGCPPSIITD-LDSHSAIT 54 (153)
T ss_dssp HHHHHHHHHHHTTCCGGGEEC----CCCEE
T ss_pred HHHHHHHHHHHcCCChhHhhc-cCCcCcEE
Confidence 588999999999988887755 55555543
No 46
>3lyb_A Putative endoribonuclease; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.66A {Klebsiella pneumoniae}
Probab=37.91 E-value=40 Score=19.05 Aligned_cols=41 Identities=12% Similarity=0.172 Sum_probs=26.3
Q ss_pred HHHHHHhhcCCCCcceeeEeee-eccccccchhhHHHHHHHH
Q psy2493 14 QRLENAMAGMGTNDRTLIRIIV-TRSEIDLGDIKQDYLKMYE 54 (62)
Q Consensus 14 ~~L~~a~kg~gt~e~~Li~il~-~rs~~~l~~i~~~y~~~yg 54 (62)
..|...++..|.+-+.++++.+ -++..++..+.+.|.+.|+
T Consensus 78 ~Ni~aiL~~aG~~l~~Vvkvtvyl~d~~df~~~n~v~~~~f~ 119 (165)
T 3lyb_A 78 ESIRRTVASAGGQMSDVIKLVQYFRNLDHFPYYSRVRKLFYP 119 (165)
T ss_dssp HHHHHHHHTTTCCGGGEEEEEEEESCGGGHHHHHHHHHHHCS
T ss_pred HHHHHHHHHhcCChhHhEEEEEEECCHHHhHHHHHHHHHHcC
Confidence 3445566666766555654433 2455678888888888776
No 47
>3ggy_A Increased sodium tolerance protein 1; ESCRT-III like, phosphoprotein, protein transport, endocytosis; 1.70A {Saccharomyces cerevisiae} PDB: 3ggz_A
Probab=35.19 E-value=14 Score=21.86 Aligned_cols=21 Identities=10% Similarity=0.044 Sum_probs=18.2
Q ss_pred cccchhhHHHHHHHHHHHHHh
Q psy2493 40 IDLGDIKQDYLKMYETTLEER 60 (62)
Q Consensus 40 ~~l~~i~~~y~~~yg~~L~~~ 60 (62)
.+|..|+..|..+||+++...
T Consensus 123 pEL~~ir~~l~~KyGkeF~~~ 143 (193)
T 3ggy_A 123 KELSQLKDLMAWKINVEFVNG 143 (193)
T ss_dssp TTHHHHHHHHHHHTCHHHHHH
T ss_pred hHHHHHHHHHHHHhCHHHHHH
Confidence 678899999999999998653
No 48
>1ry9_A SPA15 protein, surface presentation of antigens protein SPAK; alpha/beta fold, chaperone; 1.82A {Shigella flexneri} SCOP: d.198.1.1
Probab=34.00 E-value=18 Score=20.52 Aligned_cols=30 Identities=17% Similarity=0.273 Sum_probs=21.9
Q ss_pred HHHHHHHHHhhcCCCCcceeeEeeeeccccc
Q psy2493 11 YLAQRLENAMAGMGTNDRTLIRIIVTRSEID 41 (62)
Q Consensus 11 ~~a~~L~~a~kg~gt~e~~Li~il~~rs~~~ 41 (62)
-.++.+++++...|.+.+.+-. +-.+|...
T Consensus 17 di~~Lv~~~L~~~Gc~~dli~~-LD~HSTI~ 46 (145)
T 1ry9_A 17 NLVQLVRDSLFTIGCPPSIITD-LDSHSAIT 46 (145)
T ss_dssp HHHHHHHHHHHHHTCCGGGEEE-SSTTSCEE
T ss_pred HHHHHHHHHHHHcCCChhHhhc-cCCCCcEE
Confidence 3689999999999988777755 44455433
No 49
>3lme_A Possible translation initiation inhibitor; structural genomics, RPA2473, PSI-2, protein structure initiative; 2.74A {Rhodopseudomonas palustris} SCOP: d.79.1.0
Probab=33.78 E-value=59 Score=17.60 Aligned_cols=42 Identities=10% Similarity=0.154 Sum_probs=25.1
Q ss_pred HHHHHHhhcCCCCcceeeEeeee-ccccccc-hhhHHHHHHHHH
Q psy2493 14 QRLENAMAGMGTNDRTLIRIIVT-RSEIDLG-DIKQDYLKMYET 55 (62)
Q Consensus 14 ~~L~~a~kg~gt~e~~Li~il~~-rs~~~l~-~i~~~y~~~yg~ 55 (62)
..|...++..|.+-+.++++.+- ++..++. .+.+.|.+.||.
T Consensus 57 ~ni~~~L~~aG~~l~~Vvk~~vyl~d~~d~~~~~n~v~~~~f~~ 100 (138)
T 3lme_A 57 DNMLAAAEAAGATKADAVRLTVFVTDVAKYRPVVNKVQKDIWGD 100 (138)
T ss_dssp HHHHHHHHTTTCCGGGEEEEEEEESCHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHcCCCHHHeEEEEEEECCHHHHHHHHHHHHHHHcCC
Confidence 44555667777766666655432 3434554 577777777763
No 50
>3k12_A Uncharacterized protein A6V7T0; structural genomics, unknown function, PSI-2, protein struct initiative; 1.49A {Pseudomonas aeruginosa}
Probab=33.25 E-value=20 Score=19.10 Aligned_cols=41 Identities=7% Similarity=0.310 Sum_probs=25.4
Q ss_pred HHHHHHhhcCCCCcceeeEeee-eccccccchhhHHHHHHHH
Q psy2493 14 QRLENAMAGMGTNDRTLIRIIV-TRSEIDLGDIKQDYLKMYE 54 (62)
Q Consensus 14 ~~L~~a~kg~gt~e~~Li~il~-~rs~~~l~~i~~~y~~~yg 54 (62)
..|...++..|.+-+.++++.+ -++..++..+.+.|.+.||
T Consensus 44 ~ni~~~L~~aG~~~~~Vvk~tvyl~d~~df~~~n~v~~~~f~ 85 (122)
T 3k12_A 44 ENIDRLLQSVGSDRGQVLSVRILLAHREDYAGLNQVWDQWFP 85 (122)
T ss_dssp HHHHHHHHHTTCCGGGEEEEEEEESCGGGHHHHHHHHTTTSC
T ss_pred HHHHHHHHHcCCCHHHEEEEEEEEcCchHHHHHHHHHHHHhC
Confidence 3455666666666555654433 2455677788888877665
No 51
>2ou1_A Apolipoprotein A-II; high density lipoproteins, helix, cholesterol metabolism X-RAY diffraction, lipid binding protein; 2.00A {Homo sapiens} PDB: 1l6l_A
Probab=32.76 E-value=33 Score=17.29 Aligned_cols=22 Identities=18% Similarity=0.375 Sum_probs=14.2
Q ss_pred cccchhhHHHHH---HHHHHHHHhh
Q psy2493 40 IDLGDIKQDYLK---MYETTLEERI 61 (62)
Q Consensus 40 ~~l~~i~~~y~~---~yg~~L~~~I 61 (62)
..+..+...|.+ .||++|.+-.
T Consensus 5 ~~~Qsl~SqYfQt~TdyGKDL~EKa 29 (77)
T 2ou1_A 5 PCVESLVSQYFQTVTDYGKDLMEKV 29 (77)
T ss_dssp CCTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHhHHHHHHc
Confidence 446656666654 5899997643
No 52
>3fap_B FRAP, FKBP12-rapamycin associated protein; complex, gene therapy, cell cycle; HET: ARD; 1.85A {Homo sapiens} SCOP: a.24.7.1 PDB: 2fap_B* 2rse_B 1nsg_B* 4fap_B* 1aue_A 2gaq_A 1fap_B*
Probab=32.57 E-value=31 Score=17.98 Aligned_cols=13 Identities=23% Similarity=0.391 Sum_probs=10.9
Q ss_pred HHHHHHHHHHHHh
Q psy2493 48 DYLKMYETTLEER 60 (62)
Q Consensus 48 ~y~~~yg~~L~~~ 60 (62)
+|.+.||++|.++
T Consensus 51 sF~~~fG~~L~~A 63 (94)
T 3fap_B 51 SFNQAYGRDLMEA 63 (94)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 5889999999865
No 53
>2fm8_A Surface presentation of antigens protein SPAK; type III secretion, chaperone, translocation, protein foldin virulence, bacterial, chaperone-cell invasion C; 2.20A {Salmonella typhimurium} SCOP: d.198.1.1
Probab=31.05 E-value=16 Score=20.38 Aligned_cols=28 Identities=21% Similarity=0.252 Sum_probs=19.9
Q ss_pred HHHHHHHHhhcCCCCcceeeEeeeecccc
Q psy2493 12 LAQRLENAMAGMGTNDRTLIRIIVTRSEI 40 (62)
Q Consensus 12 ~a~~L~~a~kg~gt~e~~Li~il~~rs~~ 40 (62)
.++.+++++...|.+.+.+-. +-.+|..
T Consensus 6 i~~Lv~~~L~~~Gc~~~li~~-Ld~HStI 33 (135)
T 2fm8_A 6 IAELVRSALEVSGCDPSLIGG-IDSHSTI 33 (135)
T ss_dssp HHHHHHHHHHHHTCCGGGBCC-CCSSSEE
T ss_pred HHHHHHHHHHHcCCChhHhhc-cCCcCcE
Confidence 478899999999977776644 4444443
No 54
>1sgo_A HSPC210, protein C14ORF129; HR969, structure, human protein, NESG, structural genomics, HS.4104 HOMO sapiens, NESG cluster ID 18152.; NMR {Homo sapiens} SCOP: d.82.3.1
Probab=30.32 E-value=30 Score=19.51 Aligned_cols=20 Identities=20% Similarity=0.474 Sum_probs=16.3
Q ss_pred cchhhHHHHHHHHHHHHHhh
Q psy2493 42 LGDIKQDYLKMYETTLEERI 61 (62)
Q Consensus 42 l~~i~~~y~~~yg~~L~~~I 61 (62)
|+.|...|++.||.-|.+.+
T Consensus 111 L~~iSP~fr~~Fg~~L~~KL 130 (139)
T 1sgo_A 111 LDTLSPAYREAFGNALLQRL 130 (139)
T ss_dssp HHHHCHHHHHHHHHHHHHHH
T ss_pred HHHhCHHHHHHHHHHHHHHH
Confidence 55788899999999887653
No 55
>3l7q_A Putative translation initiation inhibitor, ALDR R like protein; translation initiation inhibitor regulator-like; 2.50A {Streptococcus mutans} SCOP: d.79.1.0
Probab=29.91 E-value=23 Score=18.85 Aligned_cols=41 Identities=10% Similarity=0.216 Sum_probs=23.9
Q ss_pred HHHHHHhhcCCCCcceeeEeee-eccccccchhhHHHHHHHH
Q psy2493 14 QRLENAMAGMGTNDRTLIRIIV-TRSEIDLGDIKQDYLKMYE 54 (62)
Q Consensus 14 ~~L~~a~kg~gt~e~~Li~il~-~rs~~~l~~i~~~y~~~yg 54 (62)
..|...++..|.+-+.++++.+ -++..++..+.+.|.+.||
T Consensus 55 ~ni~~~L~~ag~~~~~vvk~~vyl~d~~~~~~~n~v~~~~f~ 96 (125)
T 3l7q_A 55 KNISAILTEAGTDFDHVVKTTCFLSDIDDFVPFNEVYATAFK 96 (125)
T ss_dssp HHHHHHHHHHTCCGGGEEEEEEEESCGGGHHHHHHHHHTTCC
T ss_pred HHHHHHHHHcCCCHHHEEEEEEEEcCHHHHHHHHHHHHHHcC
Confidence 3444555555555555554433 2455677788888777665
No 56
>4g6u_B EC869 CDII; beta-augmentation, DNAse, toxin, immunity; 2.35A {Escherichia coli O157}
Probab=29.66 E-value=11 Score=22.10 Aligned_cols=29 Identities=17% Similarity=0.282 Sum_probs=15.7
Q ss_pred Eeeeeccccccc-hhhHHHHHHHHHHHHHh
Q psy2493 32 RIIVTRSEIDLG-DIKQDYLKMYETTLEER 60 (62)
Q Consensus 32 ~il~~rs~~~l~-~i~~~y~~~yg~~L~~~ 60 (62)
.+=.+.|++++. +|+.+|.+.-|.+|++.
T Consensus 144 ilp~d~s~eElGaAlr~AfsrC~~~~~~~~ 173 (177)
T 4g6u_B 144 VLPADSSPTEIGSGLRLALSRCKGTSLEHH 173 (177)
T ss_dssp EEETTCCHHHHHHHHHHHHTC---------
T ss_pred EEeCCCCHHHHHHHHHHHHHHccCCccccc
Confidence 333567788888 99999999999999863
No 57
>1qah_A Perchloric acid soluble protein; alpha-beta structure; 1.80A {Rattus norvegicus} SCOP: d.79.1.1 PDB: 1oni_A 1nq3_A
Probab=27.54 E-value=37 Score=18.36 Aligned_cols=41 Identities=15% Similarity=0.341 Sum_probs=25.1
Q ss_pred HHHHHHhhcCCCCcceeeEeee-eccccccchhhHHHHHHHH
Q psy2493 14 QRLENAMAGMGTNDRTLIRIIV-TRSEIDLGDIKQDYLKMYE 54 (62)
Q Consensus 14 ~~L~~a~kg~gt~e~~Li~il~-~rs~~~l~~i~~~y~~~yg 54 (62)
+.|...++..|.+-+.++++.+ -++..++..+.+.|.+.||
T Consensus 59 ~ni~~~L~~aG~~l~~vvk~~vyl~d~~d~~~~n~~~~~~f~ 100 (136)
T 1qah_A 59 KNLGEILKAAGCDFTNVVKTTVLLADINDFGTVNEIYKTYFQ 100 (136)
T ss_dssp HHHHHHHHHTTCCGGGEEEEEEEESCGGGHHHHHHHHHTTCC
T ss_pred HHHHHHHHHcCCCHHHEEEEEEEEccCccHHHHHHHHHHHcC
Confidence 4455566666666666665433 2445677788888776664
No 58
>3i3f_A Hypothetical protein; structural genomics, niaid, decode, infectious seattle structural genomics center for infectious disease, unknown function; 1.35A {Giardia lamblia}
Probab=26.85 E-value=58 Score=17.66 Aligned_cols=40 Identities=3% Similarity=0.229 Sum_probs=25.0
Q ss_pred HHHHHHhhcCCCCcceeeEe--eeecccc---ccchhhHHHHHHHH
Q psy2493 14 QRLENAMAGMGTNDRTLIRI--IVTRSEI---DLGDIKQDYLKMYE 54 (62)
Q Consensus 14 ~~L~~a~kg~gt~e~~Li~i--l~~rs~~---~l~~i~~~y~~~yg 54 (62)
+.|...++..|.+-+.++++ .++ +.. ++..+.+.|.+.||
T Consensus 66 ~nl~~~L~~aG~~~~~Vvk~~vyl~-d~~~~~df~~~n~v~~~~f~ 110 (141)
T 3i3f_A 66 DNIRKCLEYANSGLDYIVSLNIFLS-TSLSDSEEARFNELYREVFC 110 (141)
T ss_dssp HHHHHHHHHTTCCGGGEEEEEEEEE-TTCCHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHcCCCHHHEEEEEEEEc-CCccccCHHHHHHHHHHHhC
Confidence 34455666666665555544 443 334 78888888888874
No 59
>1xrg_A Putative translation initiation inhibitor, YJGF family; conserved hypothetical protein, protein structure initiative, PSI; 2.20A {Clostridium thermocellum} SCOP: d.79.1.1
Probab=26.22 E-value=39 Score=18.90 Aligned_cols=41 Identities=15% Similarity=0.382 Sum_probs=25.6
Q ss_pred HHHHHHhhcCCCCcceeeEeee-eccccccchhhHHHHHHHH
Q psy2493 14 QRLENAMAGMGTNDRTLIRIIV-TRSEIDLGDIKQDYLKMYE 54 (62)
Q Consensus 14 ~~L~~a~kg~gt~e~~Li~il~-~rs~~~l~~i~~~y~~~yg 54 (62)
+.|...++..|.+-+.++++.+ -++..++..+.+.|.+.|+
T Consensus 87 ~ni~~iL~~aG~~l~~Vvk~tvyl~d~~df~~~n~v~~~~f~ 128 (156)
T 1xrg_A 87 ENLKNVLEAAGSSLNKVVKTTVFIKDMDSFAKVNEVYAKYFS 128 (156)
T ss_dssp HHHHHHHHHTTCCGGGEEEEEEEESCGGGHHHHHHHHHTTCC
T ss_pred HHHHHHHHHhCCCHHHEEEEEEEECChHHHHHHHHHHHHHcC
Confidence 4455566666766555665433 2445678888888877665
No 60
>2h8e_A Crossover junction endodeoxyribonuclease RUSA; homologous recombination, DNA repair, resolvase, hydrolase; 1.20A {Escherichia coli} PDB: 2h8c_A 1q8r_A
Probab=25.67 E-value=66 Score=16.90 Aligned_cols=28 Identities=14% Similarity=0.140 Sum_probs=20.5
Q ss_pred HHHHHHHHHhhcC--CCCcceeeEeeeecc
Q psy2493 11 YLAQRLENAMAGM--GTNDRTLIRIIVTRS 38 (62)
Q Consensus 11 ~~a~~L~~a~kg~--gt~e~~Li~il~~rs 38 (62)
-.++.+.+||.|. ..|+..+.++.+.+-
T Consensus 73 N~~K~~~Dal~~~Gv~~DD~qv~~~~~~k~ 102 (120)
T 2h8e_A 73 NLQKAAFDALTKAGFWLDDAQVVDYRVVKM 102 (120)
T ss_dssp HHHHHHHHHHHHHTSBSCGGGEEEEEEEEE
T ss_pred chHHHHHHHhcCCCcEeCCceEEEEEEEEe
Confidence 3467788888765 588888888877654
No 61
>2cwj_A Putative endonuclease; hydrolase, endoribonucrease, structural GE NPPSFA, national project on protein structural and function analyses; 3.60A {Aeropyrum pernix} SCOP: d.79.1.1
Probab=25.64 E-value=27 Score=18.49 Aligned_cols=42 Identities=12% Similarity=0.332 Sum_probs=25.4
Q ss_pred HHHHHHHhhcCCCCcceeeEeee-eccccccchhhHHHHHHHH
Q psy2493 13 AQRLENAMAGMGTNDRTLIRIIV-TRSEIDLGDIKQDYLKMYE 54 (62)
Q Consensus 13 a~~L~~a~kg~gt~e~~Li~il~-~rs~~~l~~i~~~y~~~yg 54 (62)
...|...++..|.+-+.++++.+ -++..++..+.+.|.+.||
T Consensus 49 l~ni~~~L~~ag~~l~~vvk~~vyl~d~~df~~~n~~~~~~f~ 91 (123)
T 2cwj_A 49 LDNLKAIVEGAGYSMDDIVKVTVYITDISRFSEFNEVYREYFN 91 (123)
T ss_dssp HHHHHHHHHHTSCCGGGCCEEEEEESSSSHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHcCCCHHHeEEEEEEEcCHHHHHHHHHHHHHHcC
Confidence 34455666666665555655433 2445677777777776665
No 62
>2npt_A Dual specificity mitogen-activated protein kinase; MAP2K5, MEK5, MKK PRKMK5, MAP kinase kinase 5, PHOX, PHOX-domain; 1.75A {Homo sapiens} SCOP: d.15.2.2 PDB: 2o2v_A 1wi0_A
Probab=24.30 E-value=46 Score=17.72 Aligned_cols=22 Identities=27% Similarity=0.372 Sum_probs=16.8
Q ss_pred EeeeeccccccchhhHHHHHHHH
Q psy2493 32 RIIVTRSEIDLGDIKQDYLKMYE 54 (62)
Q Consensus 32 ~il~~rs~~~l~~i~~~y~~~yg 54 (62)
||.+ ||..+|.+.-..|...+.
T Consensus 67 RITV-RSDeE~kAMlsyy~~~~~ 88 (106)
T 2npt_A 67 RITV-RSDEEMKAMLSYYYSTVM 88 (106)
T ss_dssp EEEE-CSHHHHHHHHHHHHHHHH
T ss_pred eeEE-cchHHHHHHHHHHHHHHH
Confidence 4444 999999988888876653
No 63
>2guz_B Mitochondrial import inner membrane translocase subunit TIM16; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}
Probab=24.25 E-value=70 Score=15.33 Aligned_cols=31 Identities=6% Similarity=0.358 Sum_probs=19.2
Q ss_pred HHHhhcCCCCcceeeEeeeeccccccchhhHHHHHHHHH
Q psy2493 17 ENAMAGMGTNDRTLIRIIVTRSEIDLGDIKQDYLKMYET 55 (62)
Q Consensus 17 ~~a~kg~gt~e~~Li~il~~rs~~~l~~i~~~y~~~yg~ 55 (62)
.+|.+=+|.++.. .......|+.+|.+++..
T Consensus 4 ~EA~~ILgv~~~~--------~~a~~~~Ik~~yr~Lm~~ 34 (65)
T 2guz_B 4 DESCKILNIEESK--------GDLNMDKINNRFNYLFEV 34 (65)
T ss_dssp HHHHHHTTCCGGG--------TCCSHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCCCCc--------CcCCHHHHHHHHHHHHHH
Confidence 4555555554432 024678999999988743
No 64
>2ig8_A Hypothetical protein PA3499; structural genomics, PSI-2, Pro structure initiative; 1.90A {Pseudomonas aeruginosa}
Probab=23.50 E-value=97 Score=16.72 Aligned_cols=40 Identities=13% Similarity=0.215 Sum_probs=25.6
Q ss_pred HHHHHHhhcCCCCcceeeEeee-eccccccchhhHHHHHHH
Q psy2493 14 QRLENAMAGMGTNDRTLIRIIV-TRSEIDLGDIKQDYLKMY 53 (62)
Q Consensus 14 ~~L~~a~kg~gt~e~~Li~il~-~rs~~~l~~i~~~y~~~y 53 (62)
..|...++..|.+-+.++++.+ -++..++..+.+.|.+.|
T Consensus 62 ~ni~~~L~~aG~~l~~vvk~~vyl~d~~df~~~~~v~~~~f 102 (144)
T 2ig8_A 62 GKVKALLEAAGGHVGNLYKLNVYVTRIADKDAIGRARQEFF 102 (144)
T ss_dssp HHHHHHHHHTTCCGGGEEEEEEEESCGGGHHHHHHHHHHHT
T ss_pred HHHHHHHHHcCCCHHHEEEEEEEECChHHHHHHHHHHHHHh
Confidence 3445566666766666665433 245567888888888877
No 65
>1nh1_A Avirulence B protein; helix bundle, avirulence protein; 2.20A {Pseudomonas syringae} SCOP: e.45.1.1 PDB: 2nud_A 2nun_A*
Probab=22.09 E-value=35 Score=21.70 Aligned_cols=27 Identities=15% Similarity=0.089 Sum_probs=20.7
Q ss_pred eeccccccchhhHHHHHHHHHHHHHhh
Q psy2493 35 VTRSEIDLGDIKQDYLKMYETTLEERI 61 (62)
Q Consensus 35 ~~rs~~~l~~i~~~y~~~yg~~L~~~I 61 (62)
+.||+.+..+=..-++..||+|+.+.+
T Consensus 47 vARWPD~~Nkd~tp~qmeYgqSfy~~s 73 (330)
T 1nh1_A 47 AARWPDDSSKSNTPENRAYCQSMYNSI 73 (330)
T ss_dssp CCCCSSCCCCCCSHHHHHHHHHHHHHH
T ss_pred eeccCCccccccCHHHHHHHHHHHHHH
Confidence 358888877777778889999988754
No 66
>3k0t_A Endoribonuclease L-PSP, putative; glucose binding, ER stressor, sugar binding protein; HET: BGC; 2.10A {Pseudomonas syringae PV}
Probab=22.04 E-value=40 Score=18.51 Aligned_cols=41 Identities=5% Similarity=0.172 Sum_probs=24.7
Q ss_pred HHHHHHhhcCCCCcceeeEeee-eccccccchhhHHHHHHHH
Q psy2493 14 QRLENAMAGMGTNDRTLIRIIV-TRSEIDLGDIKQDYLKMYE 54 (62)
Q Consensus 14 ~~L~~a~kg~gt~e~~Li~il~-~rs~~~l~~i~~~y~~~yg 54 (62)
..|...++..|.+-+.++++.+ -++..++..+.+.|.+.||
T Consensus 73 ~ni~aiL~~aG~~l~~Vvk~tvyl~d~~df~~~n~v~~~~f~ 114 (143)
T 3k0t_A 73 ENLKSVAQAAGGSFKDIVKLNIFLTDLGHFAKVNEIMGSYFS 114 (143)
T ss_dssp HHHHHHHHHTTCCGGGEEEEEEEESCGGGHHHHHHHHTTTCC
T ss_pred HHHHHHHHHhCCChHHEEEEEEEEcChHHHHHHHHHHHHHcC
Confidence 3445566666766655665433 2444677777777776654
No 67
>2z16_A Matrix protein 1, M1; AIV-7M1, H5N1, structural genomics; 2.02A {Influenza a virus} PDB: 3md2_A 1ea3_A 1aa7_A
Probab=20.19 E-value=13 Score=21.32 Aligned_cols=30 Identities=37% Similarity=0.478 Sum_probs=24.9
Q ss_pred chHHHHHHHHHHhhcCCCCcceeeEeeeec
Q psy2493 8 KSAYLAQRLENAMAGMGTNDRTLIRIIVTR 37 (62)
Q Consensus 8 ~~~~~a~~L~~a~kg~gt~e~~Li~il~~r 37 (62)
+....|+.|+.-+.|..||-++|.++|-+|
T Consensus 27 ~kaeia~~l~~~f~gkntDLealmEWlk~r 56 (165)
T 2z16_A 27 LKAEIAQKLEDVFAGKNTDLEALMEWLKTR 56 (165)
T ss_dssp HHHHHHHHHHHHHHTSCCCHHHHHHHHHHC
T ss_pred CchHHHHHHHHHHcccccCHHHHHHHHhcC
Confidence 344568999999999999999999888765
No 68
>3rmr_A ATR1, avirulence protein; effector, RPP1-recognized, alpha-helical, W-motif, seahorse, RPP1, R-protein, protein binding; 2.30A {Hyaloperonospora parasitica}
Probab=20.17 E-value=45 Score=19.89 Aligned_cols=24 Identities=29% Similarity=0.437 Sum_probs=16.6
Q ss_pred ccchHHHHHHHHHHhhcCCCCccee
Q psy2493 6 RDKSAYLAQRLENAMAGMGTNDRTL 30 (62)
Q Consensus 6 ~~~~~~~a~~L~~a~kg~gt~e~~L 30 (62)
.||..||...|| ||...|.|-+.|
T Consensus 174 snpsryfsavlh-amekp~ad~r~l 197 (260)
T 3rmr_A 174 SNPSRYFSAVLH-AMEKPDADSRVL 197 (260)
T ss_dssp TCHHHHHHHHHH-HHHSTTCCHHHH
T ss_pred CChhHHHHHHHH-HHhCCCchHHHh
Confidence 378888887776 677777765544
Done!