BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy2494
(166 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|401679707|ref|ZP_10811632.1| cytidine deaminase [Veillonella sp. ACP1]
gi|400219337|gb|EJO50207.1| cytidine deaminase [Veillonella sp. ACP1]
Length = 134
Score = 138 bits (348), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 67/121 (55%), Positives = 89/121 (73%), Gaps = 8/121 (6%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
QNL N +I+AR+NAYCPYS VGAALLC+D TI+ GCN+ENASYG+T CAE+TA+ KA+
Sbjct: 7 QNLVNRAIKARENAYCPYSHFAVGAALLCEDGTIYEGCNIENASYGLTNCAERTAVFKAV 66
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQVGLITI 136
SEG TKFK +AV A D+ +PCG+CRQV+AEF P ++I+ + V ++TI
Sbjct: 67 SEGHTKFKALAVVA---DTEGPCAPCGACRQVVAEFKIP-----IIIMGNLMGNVKIVTI 118
Query: 137 D 137
+
Sbjct: 119 E 119
>gi|242247120|ref|NP_001156066.1| uncharacterized protein LOC100159439 [Acyrthosiphon pisum]
gi|239790229|dbj|BAH71688.1| ACYPI000810 [Acyrthosiphon pisum]
Length = 157
Score = 135 bits (340), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 64/128 (50%), Positives = 94/128 (73%), Gaps = 2/128 (1%)
Query: 4 HDIMEFSALDPIEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGM 63
+ + + + L +Q+L ++ AR+ AY PYS +VGAAL C D TIF+GCNVENASYG+
Sbjct: 10 NRLKQLNDLSNEDQHLISMCTLARERAYVPYSNFKVGAALRCDDGTIFSGCNVENASYGL 69
Query: 64 TICAEKTAISKAISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLI 123
ICAE+TAI KA+SEG+TKF IA++ + ++N+FV PCG+CRQV++EF++P D+ V +
Sbjct: 70 AICAERTAIVKAVSEGKTKFTTIAIAGL--NNNQFVPPCGACRQVLSEFNNPNNDMIVYL 127
Query: 124 VKSDRSQV 131
+ + S V
Sbjct: 128 YQPEGSNV 135
>gi|383847207|ref|XP_003699246.1| PREDICTED: cytidine deaminase-like [Megachile rotundata]
Length = 148
Score = 134 bits (337), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 72/136 (52%), Positives = 91/136 (66%), Gaps = 5/136 (3%)
Query: 1 MVGHDIMEFSALDPIEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENAS 60
M I++F+ L+P Q L SI AR+ +Y PYSK +VGAA+LC D TIFTGCNVENAS
Sbjct: 1 MNEETIIDFTTLEPNIQTLIKKSIAAREYSYSPYSKFKVGAAILCVDGTIFTGCNVENAS 60
Query: 61 YGMTICAEKTAISKAISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQ 120
Y + CAE+TAI KA+SEG+ KFK +AV+A + N FV+PCG CRQ IAEF DI
Sbjct: 61 YPVGTCAERTAIVKAVSEGKRKFKALAVAAD-KEKNDFVTPCGFCRQAIAEFG----DII 115
Query: 121 VLIVKSDRSQVGLITI 136
+ + D + V TI
Sbjct: 116 IYLTGPDTTSVLKTTI 131
>gi|241632336|ref|XP_002410335.1| cytidine deaminase, putative [Ixodes scapularis]
gi|215503392|gb|EEC12886.1| cytidine deaminase, putative [Ixodes scapularis]
Length = 140
Score = 132 bits (331), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 63/101 (62%), Positives = 78/101 (77%), Gaps = 3/101 (2%)
Query: 13 DPIEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAI 72
D Q L +LS + R NAYCPYS++QVGAALLC+D TI+TGCNVENASYG+TICAE+TAI
Sbjct: 8 DKTVQKLVHLSQEVRANAYCPYSQVQVGAALLCEDGTIYTGCNVENASYGLTICAERTAI 67
Query: 73 SKAISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFS 113
KA+SEG+ FK +AV++ + D F PCG+CRQ I EF
Sbjct: 68 VKAVSEGRRYFKAMAVASNMKD---FTMPCGNCRQFILEFG 105
>gi|442760593|gb|JAA72455.1| Putative cytidine deaminase, partial [Ixodes ricinus]
Length = 179
Score = 130 bits (328), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 62/100 (62%), Positives = 77/100 (77%), Gaps = 3/100 (3%)
Query: 13 DPIEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAI 72
D Q L +LS + R NAYCPYS+ QVGAALLC+D TI+TGCNVENASYG+TICAE+TAI
Sbjct: 47 DKTVQKLVHLSQEVRANAYCPYSQTQVGAALLCEDGTIYTGCNVENASYGLTICAERTAI 106
Query: 73 SKAISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEF 112
KA+SEG+ FK +AV++ + D + PCG+CRQ I EF
Sbjct: 107 VKAVSEGRRYFKAMAVASNMKD---YTMPCGNCRQFILEF 143
>gi|321458259|gb|EFX69330.1| hypothetical protein DAPPUDRAFT_202914 [Daphnia pulex]
Length = 148
Score = 129 bits (325), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 63/107 (58%), Positives = 77/107 (71%), Gaps = 2/107 (1%)
Query: 7 MEFSALDPIEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTIC 66
++F LDP Q + N + R+ AYCPYSK VGAALLC D I GCNVEN SYG+TIC
Sbjct: 8 VDFDLLDPAIQKIINKAKAVREKAYCPYSKFAVGAALLCDDGAIIDGCNVENVSYGLTIC 67
Query: 67 AEKTAISKAISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFS 113
AE++AI KA+SEGQ F IA+ A + D KFV PCG+CRQV+AEF+
Sbjct: 68 AERSAICKAMSEGQKVFNSIAICAEMKD--KFVGPCGACRQVLAEFN 112
>gi|71726731|gb|AAZ39529.1| cytidine deaminase [Biomphalaria glabrata]
Length = 139
Score = 129 bits (323), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 60/115 (52%), Positives = 83/115 (72%), Gaps = 5/115 (4%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
++L S +A+ AYCPYSK QVGAA+L +D +FTGCNVEN SY +TICAE++A+ KA+
Sbjct: 5 ESLVKASHEAKLKAYCPYSKFQVGAAVLTEDGKVFTGCNVENVSYSLTICAERSALVKAV 64
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQV 131
SEG T+FK IAV++ +PD K++SPCG+CRQ + EF D V + K D + +
Sbjct: 65 SEGHTRFKAIAVASNMPD--KYISPCGACRQFLLEFGK---DYDVYMTKPDHTFI 114
>gi|333994401|ref|YP_004527014.1| cytidine deaminase [Treponema azotonutricium ZAS-9]
gi|333736614|gb|AEF82563.1| cytidine deaminase [Treponema azotonutricium ZAS-9]
Length = 136
Score = 128 bits (321), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 64/129 (49%), Positives = 87/129 (67%), Gaps = 8/129 (6%)
Query: 18 NLANLSIQAR---DNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISK 74
N+ L +AR D AY PYSK +VGAALL D T+FTGCNVEN SYG+TICAE+TA++K
Sbjct: 5 NMDELYAKAREVADRAYAPYSKFRVGAALLADDGTVFTGCNVENRSYGLTICAERTALTK 64
Query: 75 AISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQV---LIVKSDRSQV 131
A+SEG+ FK +A++ PDS+ V PCG+CRQV++EF P ++ + D +
Sbjct: 65 AVSEGRRSFKALAIAT--PDSDYPVGPCGACRQVLSEFMEPQAPVRFGGNTPERVDTTIG 122
Query: 132 GLITIDGMY 140
GL+ D +Y
Sbjct: 123 GLLPYDSLY 131
>gi|417000618|ref|ZP_11940749.1| cytidine deaminase [Veillonella parvula ACS-068-V-Sch12]
gi|333975922|gb|EGL76796.1| cytidine deaminase [Veillonella parvula ACS-068-V-Sch12]
Length = 131
Score = 127 bits (320), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 65/123 (52%), Positives = 85/123 (69%), Gaps = 8/123 (6%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
Q L N +I ARD Y PYS VGAALLC+D TI+ GCN+ENASYG+T CAE+TAI KA+
Sbjct: 7 QKLINRAIVARDKTYSPYSHFGVGAALLCEDGTIYEGCNIENASYGLTNCAERTAIFKAV 66
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQVGLITI 136
SEGQTKFK +AV A D+ +PCG+CRQVI+EF P +I+ + R ++ +
Sbjct: 67 SEGQTKFKALAVVA---DTEGPCAPCGACRQVISEFEIPR-----IIMANLRGDYTVVEL 118
Query: 137 DGM 139
+G+
Sbjct: 119 EGL 121
>gi|348523830|ref|XP_003449426.1| PREDICTED: cytidine deaminase-like [Oreochromis niloticus]
Length = 135
Score = 127 bits (318), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 62/113 (54%), Positives = 80/113 (70%), Gaps = 5/113 (4%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
+ L + +QARD AYCPYS+ VGAA+L D IFTGCNVENASYG+T+CAE+TAI +A+
Sbjct: 6 KELVSKCLQARDKAYCPYSRFPVGAAVLTADGAIFTGCNVENASYGLTVCAERTAIQRAV 65
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRS 129
EG +F+ IAV+ + D +FV PCG+CRQV+ EF S D V + K D S
Sbjct: 66 VEGHRQFRAIAVTCDIKD--RFVGPCGACRQVLLEFGS---DWTVYLTKPDGS 113
>gi|424836385|ref|ZP_18261034.1| cytidine deaminase [Clostridium sporogenes PA 3679]
gi|365977079|gb|EHN13182.1| cytidine deaminase [Clostridium sporogenes PA 3679]
Length = 132
Score = 127 bits (318), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 65/115 (56%), Positives = 84/115 (73%), Gaps = 6/115 (5%)
Query: 23 SIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQTK 82
+I+AR+NAY PYSK +VGAALL +DDTI+TGCN+ENASYG T CAE+TAI KAISEG K
Sbjct: 10 AIEARENAYVPYSKFKVGAALLTEDDTIYTGCNIENASYGATNCAERTAIFKAISEGHKK 69
Query: 83 FKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQVGLITID 137
K IAV + + PCG CRQVI+EF+S +I ++IVK D++ + +D
Sbjct: 70 IKGIAVVGSFEE---YTYPCGICRQVISEFASE--NIDIIIVK-DKNNYEIKKLD 118
>gi|380015738|ref|XP_003691853.1| PREDICTED: cytidine deaminase-like [Apis florea]
Length = 148
Score = 126 bits (316), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 66/139 (47%), Positives = 89/139 (64%), Gaps = 5/139 (3%)
Query: 1 MVGHDIMEFSALDPIEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENAS 60
M +I++F+ L+P Q+L +I R+ +Y PYSK +VGAA+LC D +IFTGCNVENAS
Sbjct: 1 MSTEEIIDFTKLEPDIQSLIKKTIAVREYSYSPYSKFKVGAAILCDDGSIFTGCNVENAS 60
Query: 61 YGMTICAEKTAISKAISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQ 120
Y + CAE+TAI KA+SEG+ KFK + V A +N F +PCG CRQ IAEF DI
Sbjct: 61 YPVGTCAERTAIVKAVSEGKRKFKVLTVVAD-KKNNIFTTPCGFCRQAIAEFG----DIP 115
Query: 121 VLIVKSDRSQVGLITIDGM 139
+ + D V T+ +
Sbjct: 116 IYLTGPDMKNVLKTTLSNL 134
>gi|282849126|ref|ZP_06258511.1| cytidine deaminase [Veillonella parvula ATCC 17745]
gi|282580830|gb|EFB86228.1| cytidine deaminase [Veillonella parvula ATCC 17745]
Length = 131
Score = 126 bits (316), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 64/123 (52%), Positives = 85/123 (69%), Gaps = 8/123 (6%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
Q L + +I ARD Y PYS VGAALLC+D TI+ GCN+ENASYG+T CAE+TAI KA+
Sbjct: 7 QKLIDRAIVARDKTYSPYSHFGVGAALLCEDGTIYEGCNIENASYGLTNCAERTAIFKAV 66
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQVGLITI 136
SEGQTKFK +AV A D+ +PCG+CRQVI+EF P +I+ + R ++ +
Sbjct: 67 SEGQTKFKALAVVA---DTEGPCAPCGACRQVISEFEIPR-----IIMANLRGDYTVVEL 118
Query: 137 DGM 139
+G+
Sbjct: 119 EGL 121
>gi|110764733|ref|XP_001122944.1| PREDICTED: cytidine deaminase-like [Apis mellifera]
Length = 148
Score = 125 bits (315), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 66/139 (47%), Positives = 89/139 (64%), Gaps = 5/139 (3%)
Query: 1 MVGHDIMEFSALDPIEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENAS 60
M +I++F+ L+P Q+L +I R+ +Y PYSK +VGAA+LC D +IFTGCNVENAS
Sbjct: 1 MSTEEIIDFTKLEPDIQSLIKKTIAVREYSYSPYSKFKVGAAILCDDGSIFTGCNVENAS 60
Query: 61 YGMTICAEKTAISKAISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQ 120
Y + CAE+TAI KA+SEG+ KFK + V A +N F +PCG CRQ IAEF DI
Sbjct: 61 YPVGTCAERTAIVKAVSEGKRKFKVLTVVAD-KKNNIFTTPCGFCRQAIAEFG----DIL 115
Query: 121 VLIVKSDRSQVGLITIDGM 139
+ + D V T+ +
Sbjct: 116 IYLTGPDMKNVLKTTLSNL 134
>gi|303230519|ref|ZP_07317274.1| cytidine deaminase [Veillonella atypica ACS-049-V-Sch6]
gi|302514802|gb|EFL56789.1| cytidine deaminase [Veillonella atypica ACS-049-V-Sch6]
Length = 134
Score = 125 bits (315), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 62/121 (51%), Positives = 86/121 (71%), Gaps = 8/121 (6%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
Q L + +I+AR+NAY PYS VGAALLC+D T++ GCN+ENASYG+T CAE+TAI KA+
Sbjct: 7 QKLMDCAIKARENAYSPYSHFAVGAALLCEDGTLYEGCNIENASYGLTNCAERTAIFKAV 66
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQVGLITI 136
SEG KFK +AV A D+ +PCG+CRQV+AEF P ++I+ + + ++TI
Sbjct: 67 SEGHIKFKALAVVA---DTEGPCAPCGACRQVMAEFKIP-----LIIMGNLMGNIKIVTI 118
Query: 137 D 137
+
Sbjct: 119 E 119
>gi|269797473|ref|YP_003311373.1| cytidine deaminase [Veillonella parvula DSM 2008]
gi|269094102|gb|ACZ24093.1| cytidine deaminase [Veillonella parvula DSM 2008]
Length = 131
Score = 125 bits (315), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 63/123 (51%), Positives = 85/123 (69%), Gaps = 8/123 (6%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
Q L N ++ ARD Y PYS VGAALLC+D +I+ GCN+ENASYG+T CAE+TAI KA+
Sbjct: 7 QKLINRAVVARDKTYSPYSHFGVGAALLCEDGSIYEGCNIENASYGLTNCAERTAIFKAV 66
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQVGLITI 136
SEGQTKFK +AV A D+ +PCG+CRQVI+EF P +I+ + R ++ +
Sbjct: 67 SEGQTKFKALAVVA---DTEGPCAPCGACRQVISEFEIPR-----IIMANLRGDYTVVDL 118
Query: 137 DGM 139
+G+
Sbjct: 119 EGL 121
>gi|158288327|ref|XP_310208.3| AGAP009489-PA [Anopheles gambiae str. PEST]
gi|157019197|gb|EAA05898.3| AGAP009489-PA [Anopheles gambiae str. PEST]
Length = 156
Score = 125 bits (314), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 62/134 (46%), Positives = 88/134 (65%), Gaps = 4/134 (2%)
Query: 3 GHDIMEFSALDPIEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYG 62
G ++E+S +D + L +IQ R+NAYCPYS VGAAL I TGCNVEN ++G
Sbjct: 11 GQTVVEYSTVDSSVKELIEAAIQVRNNAYCPYSNFPVGAALRTTTGEIVTGCNVENGTFG 70
Query: 63 MTICAEKTAISKAISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVL 122
++CAE+TA+ KAISEG +F +AV+A N+F +PCG+CRQ +AEFS A DI +
Sbjct: 71 PSVCAERTAVCKAISEGHREFTAVAVAAY--QENEFTAPCGTCRQTLAEFS--AKDIPIY 126
Query: 123 IVKSDRSQVGLITI 136
+VK +V + ++
Sbjct: 127 LVKPAPVRVMITSL 140
>gi|187778473|ref|ZP_02994946.1| hypothetical protein CLOSPO_02067 [Clostridium sporogenes ATCC
15579]
gi|187772098|gb|EDU35900.1| cytidine deaminase [Clostridium sporogenes ATCC 15579]
Length = 132
Score = 125 bits (314), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 64/115 (55%), Positives = 84/115 (73%), Gaps = 6/115 (5%)
Query: 23 SIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQTK 82
+I+AR+NAY PYSK +VGAALL +DDTI+TGCN+ENASYG T CAE+TAI KAISEG K
Sbjct: 10 AIEARENAYVPYSKFKVGAALLTEDDTIYTGCNIENASYGATNCAERTAIFKAISEGHKK 69
Query: 83 FKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQVGLITID 137
K IAV + + PCG CRQVI+EF++ +I ++IVK D++ + +D
Sbjct: 70 IKAIAVVGSFEE---YTYPCGICRQVISEFANG--NIDIIIVK-DKNNYEIKKLD 118
>gi|225709174|gb|ACO10433.1| Cytidine deaminase [Caligus rogercresseyi]
Length = 146
Score = 125 bits (313), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 63/123 (51%), Positives = 86/123 (69%), Gaps = 4/123 (3%)
Query: 5 DIMEFSALDPIEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMT 64
+ + S+L +Q+L S++ R++AYCPYSK VGAAL C D++I GCNVENASYG+
Sbjct: 3 EAQDISSLPEEDQDLCLKSMEMRESAYCPYSKFSVGAALRCSDNSIVGGCNVENASYGLC 62
Query: 65 ICAEKTAISKAISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIV 124
ICAE+TA AI+ GQT+FK IAVSA L ++F SPCG+CRQ +AEF + + +V
Sbjct: 63 ICAERTAFVSAIASGQTEFKSIAVSADL-KKDEFASPCGACRQFMAEFHP---SLPIFLV 118
Query: 125 KSD 127
+ D
Sbjct: 119 RPD 121
>gi|429759240|ref|ZP_19291744.1| cytidine deaminase [Veillonella atypica KON]
gi|429180448|gb|EKY21669.1| cytidine deaminase [Veillonella atypica KON]
Length = 134
Score = 125 bits (313), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 61/121 (50%), Positives = 86/121 (71%), Gaps = 8/121 (6%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
Q L + +I+AR+NAY PYS VGAALLC+D T++ GCN+ENASYG+T CAE+TAI KA+
Sbjct: 7 QKLMDCAIKARENAYSPYSHFAVGAALLCEDSTLYEGCNIENASYGLTNCAERTAIFKAV 66
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQVGLITI 136
SEG KFK +AV A D+ +PCG+CRQV+AEF P ++I+ + + ++T+
Sbjct: 67 SEGHIKFKALAVVA---DTEGPCAPCGACRQVMAEFKIP-----LIIMGNLMGNIKIVTM 118
Query: 137 D 137
+
Sbjct: 119 E 119
>gi|303229126|ref|ZP_07315927.1| cytidine deaminase [Veillonella atypica ACS-134-V-Col7a]
gi|302516139|gb|EFL58080.1| cytidine deaminase [Veillonella atypica ACS-134-V-Col7a]
Length = 134
Score = 124 bits (312), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 61/121 (50%), Positives = 86/121 (71%), Gaps = 8/121 (6%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
Q L + +I+AR+NAY PYS VGAALLC+D T++ GCN+ENASYG+T CAE+TAI KA+
Sbjct: 7 QKLMDCAIKARENAYSPYSHFAVGAALLCEDGTLYEGCNIENASYGLTNCAERTAIFKAV 66
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQVGLITI 136
SEG KFK +AV A D+ +PCG+CRQV+AEF P ++I+ + + ++T+
Sbjct: 67 SEGHIKFKALAVVA---DTEGPCAPCGACRQVMAEFKIP-----LIIMGNLMGNIKIVTM 118
Query: 137 D 137
+
Sbjct: 119 E 119
>gi|350406820|ref|XP_003487896.1| PREDICTED: cytidine deaminase-like [Bombus impatiens]
Length = 148
Score = 124 bits (310), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 68/151 (45%), Positives = 95/151 (62%), Gaps = 8/151 (5%)
Query: 1 MVGHDIMEFSALDPIEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENAS 60
M +I++F+ ++P Q+L S+ AR+ +Y PYSK +VGA +LC D IFTGCNVENAS
Sbjct: 1 MNTEEIIDFTDIEPDIQSLIKKSVAAREYSYSPYSKFKVGAGVLCTDGIIFTGCNVENAS 60
Query: 61 YGMTICAEKTAISKAISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQ 120
Y + CAE+TAI KA+SEG+ KFK +AV A ++N F +PCG CRQ IAEF DI
Sbjct: 61 YPVGTCAERTAIVKAVSEGKRKFKVLAVVANKVNNN-FTTPCGFCRQAIAEFG----DIP 115
Query: 121 VLIVKSDRSQVGLITIDGMYLTLHCCWERGN 151
+ + + V ++ + L C + GN
Sbjct: 116 IYLAEPLMKDVLKTSLSNL---LPCAFGLGN 143
>gi|290561246|gb|ADD38025.1| Cytidine deaminase [Lepeophtheirus salmonis]
Length = 149
Score = 123 bits (308), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 61/122 (50%), Positives = 84/122 (68%), Gaps = 4/122 (3%)
Query: 6 IMEFSALDPIEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTI 65
I+E S L ++ L S++ R AYCPYSK VGAAL C D+TI GCNVENASYG++I
Sbjct: 7 IVELSVLSQKDKELCLKSMEMRSEAYCPYSKFSVGAALRCADETIVAGCNVENASYGLSI 66
Query: 66 CAEKTAISKAISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVK 125
CAE+TAI A++ G+ +F IA+SA L +++F SPCG+CRQ +AEF + + +V+
Sbjct: 67 CAERTAIVSAVASGKKEFTSIAISADL-QNDEFASPCGACRQFMAEFDP---KLPIFLVR 122
Query: 126 SD 127
D
Sbjct: 123 HD 124
>gi|435854286|ref|YP_007315605.1| cytidine deaminase, homotetrameric [Halobacteroides halobius DSM
5150]
gi|433670697|gb|AGB41512.1| cytidine deaminase, homotetrameric [Halobacteroides halobius DSM
5150]
Length = 130
Score = 123 bits (308), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 60/98 (61%), Positives = 77/98 (78%), Gaps = 3/98 (3%)
Query: 15 IEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISK 74
+++ L +I+AR+NAY PYS +VGAALL DD I+TGCNVEN+SYG+T CAE+TAI K
Sbjct: 1 MKEQLIEEAIRARENAYTPYSNFKVGAALLTVDDEIYTGCNVENSSYGLTNCAERTAIFK 60
Query: 75 AISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEF 112
AISEG+ FK +AV A D++ VSPCG+CRQVI+EF
Sbjct: 61 AISEGKKDFKALAVVA---DTDDPVSPCGACRQVISEF 95
>gi|157113600|ref|XP_001652016.1| cytidine deaminase, putative [Aedes aegypti]
gi|108877662|gb|EAT41887.1| AAEL006518-PA [Aedes aegypti]
Length = 155
Score = 122 bits (307), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 62/137 (45%), Positives = 88/137 (64%), Gaps = 4/137 (2%)
Query: 3 GHDIMEFSALDPIEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYG 62
G ++EFS LD Q L N +I+ R+NAYCPYS VGAAL + I TGCNVEN ++
Sbjct: 11 GESVVEFSTLDAKVQELINAAIKVRNNAYCPYSNFAVGAALRTKTGEIITGCNVENGTFA 70
Query: 63 MTICAEKTAISKAISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVL 122
++CAE+ AI KAISEG +F+ +AV A +F SPCG+CRQ ++EF + ++ V
Sbjct: 71 PSVCAERNAICKAISEGFREFESLAVVAY--QETEFTSPCGTCRQTLSEFCNK--NMPVY 126
Query: 123 IVKSDRSQVGLITIDGM 139
+ K ++V L +ID +
Sbjct: 127 LAKPSPARVMLTSIDKL 143
>gi|242011954|ref|XP_002426708.1| Cytidine deaminase, putative [Pediculus humanus corporis]
gi|212510879|gb|EEB13970.1| Cytidine deaminase, putative [Pediculus humanus corporis]
Length = 149
Score = 122 bits (306), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 66/124 (53%), Positives = 83/124 (66%), Gaps = 7/124 (5%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
QNL LS AR++AY PYSK VGAALLC+D IF GCNVEN+SYG+++CAE+TAI KAI
Sbjct: 23 QNLLQLSCVARNHAYAPYSKFAVGAALLCRDGEIFQGCNVENSSYGLSVCAEQTAIVKAI 82
Query: 77 SEGQTKFKRIAVSAILPDSNKFV-SPCGSCRQVIAEFSSPACDIQVLIVKSDRSQVGLIT 135
S G + I+ A++ DSN FV +PCG CRQ I EF + I V K+D +V L
Sbjct: 83 SSGN---RNISAIAVVADSNSFVTTPCGKCRQFINEFGT---QIDVYCAKTDLKEVLLSN 136
Query: 136 IDGM 139
I +
Sbjct: 137 ISNL 140
>gi|148380898|ref|YP_001255439.1| cytidine deaminase [Clostridium botulinum A str. ATCC 3502]
gi|153932790|ref|YP_001385206.1| cytidine deaminase [Clostridium botulinum A str. ATCC 19397]
gi|153936850|ref|YP_001388675.1| cytidine deaminase [Clostridium botulinum A str. Hall]
gi|153940963|ref|YP_001392223.1| cytidine deaminase [Clostridium botulinum F str. Langeland]
gi|168179377|ref|ZP_02614041.1| cytidine deaminase [Clostridium botulinum NCTC 2916]
gi|168181632|ref|ZP_02616296.1| cytidine deaminase [Clostridium botulinum Bf]
gi|170755803|ref|YP_001782579.1| cytidine deaminase [Clostridium botulinum B1 str. Okra]
gi|170761320|ref|YP_001788259.1| cytidine deaminase [Clostridium botulinum A3 str. Loch Maree]
gi|226950372|ref|YP_002805463.1| cytidine deaminase [Clostridium botulinum A2 str. Kyoto]
gi|237796399|ref|YP_002863951.1| cytidine deaminase [Clostridium botulinum Ba4 str. 657]
gi|384463204|ref|YP_005675799.1| cytidine deaminase [Clostridium botulinum F str. 230613]
gi|387819219|ref|YP_005679566.1| cytidine deaminase [Clostridium botulinum H04402 065]
gi|421834416|ref|ZP_16269466.1| cytidine deaminase [Clostridium botulinum CFSAN001627]
gi|429246261|ref|ZP_19209598.1| cytidine deaminase [Clostridium botulinum CFSAN001628]
gi|148290382|emb|CAL84509.1| cytidine deaminase [Clostridium botulinum A str. ATCC 3502]
gi|152928834|gb|ABS34334.1| cytidine deaminase [Clostridium botulinum A str. ATCC 19397]
gi|152932764|gb|ABS38263.1| cytidine deaminase [Clostridium botulinum A str. Hall]
gi|152936859|gb|ABS42357.1| cytidine deaminase [Clostridium botulinum F str. Langeland]
gi|169121015|gb|ACA44851.1| cytidine deaminase [Clostridium botulinum B1 str. Okra]
gi|169408309|gb|ACA56720.1| cytidine deaminase [Clostridium botulinum A3 str. Loch Maree]
gi|182669720|gb|EDT81696.1| cytidine deaminase [Clostridium botulinum NCTC 2916]
gi|182675072|gb|EDT87033.1| cytidine deaminase [Clostridium botulinum Bf]
gi|226843614|gb|ACO86280.1| cytidine deaminase [Clostridium botulinum A2 str. Kyoto]
gi|229261538|gb|ACQ52571.1| cytidine deaminase [Clostridium botulinum Ba4 str. 657]
gi|295320221|gb|ADG00599.1| cytidine deaminase [Clostridium botulinum F str. 230613]
gi|322807263|emb|CBZ04837.1| cytidine deaminase [Clostridium botulinum H04402 065]
gi|409744174|gb|EKN42837.1| cytidine deaminase [Clostridium botulinum CFSAN001627]
gi|428756721|gb|EKX79256.1| cytidine deaminase [Clostridium botulinum CFSAN001628]
Length = 132
Score = 122 bits (306), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 63/115 (54%), Positives = 83/115 (72%), Gaps = 6/115 (5%)
Query: 23 SIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQTK 82
+I+AR+NAY PYSK +VGAALL +D+ I+TGCN+ENASYG T CAE+TAI KAISEG K
Sbjct: 10 AIEARENAYVPYSKFRVGAALLTEDNAIYTGCNIENASYGATNCAERTAIFKAISEGHKK 69
Query: 83 FKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQVGLITID 137
K IAV L + + PCG CRQVI+EF+ +I ++IVK D++ + +D
Sbjct: 70 IKAIAVVGSLEE---YTYPCGICRQVISEFADG--NIDIIIVK-DKNNYEIKKLD 118
>gi|323703319|ref|ZP_08114969.1| cytidine deaminase [Desulfotomaculum nigrificans DSM 574]
gi|333924044|ref|YP_004497624.1| cytidine deaminase [Desulfotomaculum carboxydivorans CO-1-SRB]
gi|323531682|gb|EGB21571.1| cytidine deaminase [Desulfotomaculum nigrificans DSM 574]
gi|333749605|gb|AEF94712.1| cytidine deaminase [Desulfotomaculum carboxydivorans CO-1-SRB]
Length = 136
Score = 122 bits (305), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 57/98 (58%), Positives = 74/98 (75%), Gaps = 3/98 (3%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
+ L N+++QAR+ AY PYSK +VGAALL ++ +FTGCNVENASYG+T CAE+TAI KA+
Sbjct: 6 EKLINMALQAREKAYVPYSKFKVGAALLTREGQVFTGCNVENASYGLTCCAERTAIFKAV 65
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSS 114
SEG F IA+ A +P + SPCG+CRQV+AEF
Sbjct: 66 SEGYKDFDAIAIVADVPG---YCSPCGACRQVLAEFGG 100
>gi|255524677|ref|ZP_05391629.1| cytidine deaminase [Clostridium carboxidivorans P7]
gi|296185636|ref|ZP_06854045.1| cytidine deaminase [Clostridium carboxidivorans P7]
gi|255511571|gb|EET87859.1| cytidine deaminase [Clostridium carboxidivorans P7]
gi|296049764|gb|EFG89189.1| cytidine deaminase [Clostridium carboxidivorans P7]
Length = 132
Score = 121 bits (304), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 58/113 (51%), Positives = 80/113 (70%), Gaps = 5/113 (4%)
Query: 19 LANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISE 78
L + +++ R NAY PYSK +VGAA+L +D ++TGCN+ENASYG T CAE+TAI KA+SE
Sbjct: 6 LVSKALEGRKNAYAPYSKFKVGAAVLTEDGKVYTGCNIENASYGATNCAERTAIFKAVSE 65
Query: 79 GQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQV 131
G T K IA+ I N++ PCG CRQVIAEF S DI++++ K++ +
Sbjct: 66 GYTTIKAIAIVGI---ENEYTYPCGICRQVIAEFGSE--DIEIILGKNENEYI 113
>gi|340721250|ref|XP_003399037.1| PREDICTED: cytidine deaminase-like [Bombus terrestris]
Length = 148
Score = 121 bits (304), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 61/112 (54%), Positives = 80/112 (71%), Gaps = 1/112 (0%)
Query: 1 MVGHDIMEFSALDPIEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENAS 60
M +I++F+ ++P Q+L S+ AR+ +Y PYSK +VGA +LC D IFTGCNVENAS
Sbjct: 1 MNTEEIIDFTDIEPDIQSLIKKSMAAREYSYSPYSKFKVGAGVLCTDGIIFTGCNVENAS 60
Query: 61 YGMTICAEKTAISKAISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEF 112
Y + CAE+TAI KA+SEG+ KFK +AV A + N F +PCG CRQ IAEF
Sbjct: 61 YPVGTCAERTAIVKAVSEGKRKFKVLAVVANKVN-NIFTTPCGFCRQAIAEF 111
>gi|449129079|ref|ZP_21765314.1| cytidine deaminase [Treponema denticola SP33]
gi|448938689|gb|EMB19617.1| cytidine deaminase [Treponema denticola SP33]
Length = 136
Score = 121 bits (304), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 63/124 (50%), Positives = 83/124 (66%), Gaps = 5/124 (4%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
+NL +++A NAY PYS VGAA+L +DD+I TG NVEN SYG+T CAE+TAI KA+
Sbjct: 8 ENLFKKALEAAKNAYAPYSNFHVGAAILLKDDSIVTGVNVENRSYGLTNCAERTAIFKAV 67
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQVGLITI 136
SEG+T FK IA++ PD++ VSPCG+CRQVI+EF + I S V L +
Sbjct: 68 SEGKTDFKAIAIAT--PDADYPVSPCGACRQVISEFMGGDTPV---IFGSSLDNVVLTDV 122
Query: 137 DGMY 140
G+Y
Sbjct: 123 KGIY 126
>gi|189520649|ref|XP_001923622.1| PREDICTED: cytidine deaminase-like [Danio rerio]
Length = 139
Score = 121 bits (303), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/113 (54%), Positives = 79/113 (69%), Gaps = 5/113 (4%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
Q L S +AR AYCPYS+ +VGAA+L D T+FTGCNVENA Y +CAE+TAISKA+
Sbjct: 7 QVLVQRSQEARKLAYCPYSRFRVGAAVLTSDGTVFTGCNVENACYTAGLCAERTAISKAV 66
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRS 129
SEG T FK IA+++ L D +F+SPCG+CRQ + EF S V + K+D S
Sbjct: 67 SEGHTTFKAIAIASDLED--RFISPCGACRQFMREFGS---QWDVYLSKTDGS 114
>gi|288555744|ref|YP_003427679.1| cytidine deaminase [Bacillus pseudofirmus OF4]
gi|288546904|gb|ADC50787.1| cytidine deaminase [Bacillus pseudofirmus OF4]
Length = 132
Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 59/118 (50%), Positives = 81/118 (68%), Gaps = 3/118 (2%)
Query: 16 EQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKA 75
+Q L L+ +AR+NAY PYSK QVGAALL +D T+F G N+ENASYG+T CAE+TA+ KA
Sbjct: 3 KQQLIELAKEARENAYVPYSKFQVGAALLMEDGTVFKGANIENASYGLTNCAERTALYKA 62
Query: 76 ISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQVGL 133
SEG K IAV A D+++ V PCG+CRQV+ E P + + +K D +++ +
Sbjct: 63 YSEGNRKVAAIAVVA---DTDRPVPPCGACRQVMVELIPPNAPVYLTNLKGDINEMSV 117
>gi|395521723|ref|XP_003764965.1| PREDICTED: uncharacterized protein LOC100929140 [Sarcophilus
harrisii]
Length = 424
Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 60/122 (49%), Positives = 82/122 (67%), Gaps = 9/122 (7%)
Query: 10 SALDPIE----QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTI 65
S +P+E Q L + +A+ AYCPYS VGAALL QD I++GCN+ENA+Y + I
Sbjct: 283 STWEPLEPAQIQKLISRGQEAKKFAYCPYSNFPVGAALLTQDGKIYSGCNIENAAYPLGI 342
Query: 66 CAEKTAISKAISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVK 125
CAE+TAI KAISEG KF+ IA+++ L +N F++PCG+CRQV+ EF V + K
Sbjct: 343 CAERTAIQKAISEGHKKFRAIAITSNL--TNDFITPCGACRQVMREFGK---HWYVYMTK 397
Query: 126 SD 127
+D
Sbjct: 398 AD 399
>gi|238020077|ref|ZP_04600503.1| hypothetical protein VEIDISOL_01957 [Veillonella dispar ATCC 17748]
gi|237863601|gb|EEP64891.1| hypothetical protein VEIDISOL_01957 [Veillonella dispar ATCC 17748]
Length = 147
Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 58/99 (58%), Positives = 73/99 (73%), Gaps = 3/99 (3%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
Q L + +I AR+ Y PYS VGAALLC+D I+ GCN+ENASYG+T CAE+TAI KA+
Sbjct: 23 QKLIDRAIVAREKTYSPYSHFGVGAALLCEDGAIYEGCNIENASYGLTNCAERTAIFKAV 82
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSP 115
SEG+TKFK +AV A D+ +PCG+CRQVI+EF P
Sbjct: 83 SEGRTKFKALAVVA---DTEGPCAPCGACRQVISEFEIP 118
>gi|289742351|gb|ADD19923.1| cytidine deaminase [Glossina morsitans morsitans]
Length = 154
Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 62/123 (50%), Positives = 82/123 (66%), Gaps = 4/123 (3%)
Query: 5 DIMEFSALDPIEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMT 64
+I EFS LD Q+L +I+AR +AYCPYS VGAAL DD+I+TGCN+ENA++
Sbjct: 14 NIKEFSTLDAPTQDLILAAIEARKSAYCPYSNFAVGAALRTFDDSIYTGCNIENAAFTAG 73
Query: 65 ICAEKTAISKAISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIV 124
ICAE+TA +KA+SEG+ F AV A+ DS F +PCG CRQ + EF+ D + +
Sbjct: 74 ICAERTAAAKAVSEGKRDFVACAVVALQEDS--FTTPCGVCRQFLIEFAKK--DFPLYVT 129
Query: 125 KSD 127
KSD
Sbjct: 130 KSD 132
>gi|339443467|ref|YP_004709472.1| hypothetical protein CXIVA_24030 [Clostridium sp. SY8519]
gi|338902868|dbj|BAK48370.1| hypothetical protein CXIVA_24030 [Clostridium sp. SY8519]
Length = 142
Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 57/125 (45%), Positives = 89/125 (71%), Gaps = 6/125 (4%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
+ L + + +AR+ AY PYS VGAALLC D +++TGCNVENASYG T+CAE+TA+ KA+
Sbjct: 6 KELIDRAEEAREKAYAPYSGFHVGAALLCDDGSVYTGCNVENASYGATVCAERTALLKAV 65
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQVGLITI 136
S+G+ F ++ I+ DS +VSPCG CRQV++EF S + V++ + D++ ++T+
Sbjct: 66 SDGKRAFTQL---VIISDSTDYVSPCGICRQVLSEFCSG--EFAVIMCRKDKA-YRVMTL 119
Query: 137 DGMYL 141
+ ++L
Sbjct: 120 EQLFL 124
>gi|16803503|ref|NP_464988.1| hypothetical protein lmo1463 [Listeria monocytogenes EGD-e]
gi|46907691|ref|YP_014080.1| cytidine deaminase [Listeria monocytogenes serotype 4b str. F2365]
gi|47093469|ref|ZP_00231232.1| cytidine deaminase [Listeria monocytogenes str. 4b H7858]
gi|47095414|ref|ZP_00233024.1| cytidine deaminase [Listeria monocytogenes str. 1/2a F6854]
gi|226224064|ref|YP_002758171.1| cytidine deaminase [Listeria monocytogenes serotype 4b str. CLIP
80459]
gi|254824478|ref|ZP_05229479.1| cytidine deaminase [Listeria monocytogenes FSL J1-194]
gi|254827751|ref|ZP_05232438.1| cytidine deaminase [Listeria monocytogenes FSL N3-165]
gi|254852088|ref|ZP_05241436.1| cytidine deaminase [Listeria monocytogenes FSL R2-503]
gi|254912137|ref|ZP_05262149.1| cytidine deaminase [Listeria monocytogenes J2818]
gi|254932648|ref|ZP_05266007.1| cytidine deaminase [Listeria monocytogenes HPB2262]
gi|254936465|ref|ZP_05268162.1| cytidine deaminase [Listeria monocytogenes F6900]
gi|254991893|ref|ZP_05274083.1| cytidine deaminase [Listeria monocytogenes FSL J2-064]
gi|255018413|ref|ZP_05290539.1| cytidine deaminase [Listeria monocytogenes FSL F2-515]
gi|255521278|ref|ZP_05388515.1| cytidine deaminase [Listeria monocytogenes FSL J1-175]
gi|284801850|ref|YP_003413715.1| hypothetical protein LM5578_1605 [Listeria monocytogenes 08-5578]
gi|284994992|ref|YP_003416760.1| hypothetical protein LM5923_1557 [Listeria monocytogenes 08-5923]
gi|300765606|ref|ZP_07075585.1| cytidine deaminase [Listeria monocytogenes FSL N1-017]
gi|386043774|ref|YP_005962579.1| cytidine deaminase [Listeria monocytogenes 10403S]
gi|386047115|ref|YP_005965447.1| cytidine deaminase [Listeria monocytogenes J0161]
gi|386050439|ref|YP_005968430.1| cytidine deaminase [Listeria monocytogenes FSL R2-561]
gi|386053716|ref|YP_005971274.1| cytidine deaminase [Listeria monocytogenes Finland 1998]
gi|386732202|ref|YP_006205698.1| cytidine deaminase [Listeria monocytogenes 07PF0776]
gi|404281020|ref|YP_006681918.1| cytidine deaminase [Listeria monocytogenes SLCC2755]
gi|404283955|ref|YP_006684852.1| cytidine deaminase [Listeria monocytogenes SLCC2372]
gi|404286885|ref|YP_006693471.1| cytidine deaminase [Listeria monocytogenes serotype 7 str.
SLCC2482]
gi|404410762|ref|YP_006696350.1| cytidine deaminase [Listeria monocytogenes SLCC5850]
gi|404413541|ref|YP_006699128.1| cytidine deaminase [Listeria monocytogenes SLCC7179]
gi|405749807|ref|YP_006673273.1| cytidine deaminase [Listeria monocytogenes ATCC 19117]
gi|405752683|ref|YP_006676148.1| cytidine deaminase [Listeria monocytogenes SLCC2378]
gi|405755621|ref|YP_006679085.1| cytidine deaminase [Listeria monocytogenes SLCC2540]
gi|405758511|ref|YP_006687787.1| cytidine deaminase [Listeria monocytogenes SLCC2479]
gi|406704236|ref|YP_006754590.1| cytidine deaminase [Listeria monocytogenes L312]
gi|417316009|ref|ZP_12102667.1| cytidine deaminase [Listeria monocytogenes J1816]
gi|417317583|ref|ZP_12104197.1| cytidine deaminase [Listeria monocytogenes J1-220]
gi|424823224|ref|ZP_18248237.1| Cytidine deaminase [Listeria monocytogenes str. Scott A]
gi|16410892|emb|CAC99541.1| lmo1463 [Listeria monocytogenes EGD-e]
gi|46880960|gb|AAT04257.1| cytidine deaminase [Listeria monocytogenes serotype 4b str. F2365]
gi|47016235|gb|EAL07158.1| cytidine deaminase [Listeria monocytogenes serotype 1/2a str.
F6854]
gi|47018145|gb|EAL08915.1| cytidine deaminase [Listeria monocytogenes str. 4b H7858]
gi|225876526|emb|CAS05235.1| Putative cytidine deaminase [Listeria monocytogenes serotype 4b
str. CLIP 80459]
gi|258600130|gb|EEW13455.1| cytidine deaminase [Listeria monocytogenes FSL N3-165]
gi|258605387|gb|EEW17995.1| cytidine deaminase [Listeria monocytogenes FSL R2-503]
gi|258609057|gb|EEW21665.1| cytidine deaminase [Listeria monocytogenes F6900]
gi|284057412|gb|ADB68353.1| hypothetical protein LM5578_1605 [Listeria monocytogenes 08-5578]
gi|284060459|gb|ADB71398.1| hypothetical protein LM5923_1557 [Listeria monocytogenes 08-5923]
gi|293584207|gb|EFF96239.1| cytidine deaminase [Listeria monocytogenes HPB2262]
gi|293590108|gb|EFF98442.1| cytidine deaminase [Listeria monocytogenes J2818]
gi|293593716|gb|EFG01477.1| cytidine deaminase [Listeria monocytogenes FSL J1-194]
gi|300513707|gb|EFK40775.1| cytidine deaminase [Listeria monocytogenes FSL N1-017]
gi|328465506|gb|EGF36735.1| cytidine deaminase [Listeria monocytogenes J1816]
gi|328474975|gb|EGF45769.1| cytidine deaminase [Listeria monocytogenes J1-220]
gi|332311904|gb|EGJ24999.1| Cytidine deaminase [Listeria monocytogenes str. Scott A]
gi|345534106|gb|AEO03547.1| cytidine deaminase [Listeria monocytogenes J0161]
gi|345537008|gb|AEO06448.1| cytidine deaminase [Listeria monocytogenes 10403S]
gi|346424285|gb|AEO25810.1| cytidine deaminase [Listeria monocytogenes FSL R2-561]
gi|346646367|gb|AEO38992.1| cytidine deaminase [Listeria monocytogenes Finland 1998]
gi|384390960|gb|AFH80030.1| cytidine deaminase [Listeria monocytogenes 07PF0776]
gi|404219007|emb|CBY70371.1| cytidine deaminase [Listeria monocytogenes ATCC 19117]
gi|404221883|emb|CBY73246.1| cytidine deaminase [Listeria monocytogenes SLCC2378]
gi|404224821|emb|CBY76183.1| cytidine deaminase [Listeria monocytogenes SLCC2540]
gi|404227655|emb|CBY49060.1| cytidine deaminase [Listeria monocytogenes SLCC2755]
gi|404230588|emb|CBY51992.1| cytidine deaminase [Listeria monocytogenes SLCC5850]
gi|404233457|emb|CBY54860.1| cytidine deaminase [Listeria monocytogenes SLCC2372]
gi|404236393|emb|CBY57795.1| cytidine deaminase [Listeria monocytogenes SLCC2479]
gi|404239240|emb|CBY60641.1| cytidine deaminase [Listeria monocytogenes SLCC7179]
gi|404245814|emb|CBY04039.1| cytidine deaminase [Listeria monocytogenes serotype 7 str.
SLCC2482]
gi|406361266|emb|CBY67539.1| cytidine deaminase [Listeria monocytogenes L312]
gi|441471150|emb|CCQ20905.1| Cytidine deaminase [Listeria monocytogenes]
gi|441474278|emb|CCQ24032.1| Cytidine deaminase [Listeria monocytogenes N53-1]
Length = 131
Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 59/108 (54%), Positives = 81/108 (75%), Gaps = 5/108 (4%)
Query: 16 EQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKA 75
E N +L+ QAR+ AY PYSK VGAAL+ +DD + GCN+ENAS+G+T CAE+TAI KA
Sbjct: 3 ENNFISLAKQAREFAYVPYSKFPVGAALVTKDDEVVLGCNIENASFGLTNCAERTAIFKA 62
Query: 76 ISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLI 123
+SEG+ FK++ V A D++ VSPCG+CRQVI+EF +P D+ V++
Sbjct: 63 VSEGKRDFKQLVVVA---DTDGPVSPCGACRQVISEFCAP--DMPVIL 105
>gi|375086340|ref|ZP_09732754.1| cytidine deaminase [Megamonas funiformis YIT 11815]
gi|374565458|gb|EHR36725.1| cytidine deaminase [Megamonas funiformis YIT 11815]
Length = 133
Score = 120 bits (300), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 59/108 (54%), Positives = 76/108 (70%), Gaps = 5/108 (4%)
Query: 19 LANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISE 78
L + + R NAY PYS +VGAA+L +DDTI+TGCN+ENASYG T CAE+TAI KAISE
Sbjct: 7 LVKKAYEGRANAYTPYSNFKVGAAVLTEDDTIYTGCNIENASYGATNCAERTAIFKAISE 66
Query: 79 GQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKS 126
G K K IA+ + N + PCG CRQVI EF++ DI++++ KS
Sbjct: 67 GHQKIKAIAIVGV---ENDYTYPCGICRQVIVEFATK--DIKIILGKS 109
>gi|255030166|ref|ZP_05302117.1| cytidine deaminase [Listeria monocytogenes LO28]
Length = 127
Score = 119 bits (299), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 59/108 (54%), Positives = 81/108 (75%), Gaps = 5/108 (4%)
Query: 16 EQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKA 75
E N +L+ QAR+ AY PYSK VGAAL+ +DD + GCN+ENAS+G+T CAE+TAI KA
Sbjct: 3 ENNFISLAKQAREFAYVPYSKFPVGAALVTKDDEVVLGCNIENASFGLTNCAERTAIFKA 62
Query: 76 ISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLI 123
+SEG+ FK++ V A D++ VSPCG+CRQVI+EF +P D+ V++
Sbjct: 63 VSEGKRDFKQLVVVA---DTDGPVSPCGACRQVISEFCAP--DMPVIL 105
>gi|47227442|emb|CAG04590.1| unnamed protein product [Tetraodon nigroviridis]
Length = 130
Score = 119 bits (299), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 60/113 (53%), Positives = 76/113 (67%), Gaps = 5/113 (4%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
Q L + ++ARD AYCPYS VGAALL D I TGCNVENAS+G+T+CAE+ A+ +A+
Sbjct: 2 QELVSKCLKARDLAYCPYSHFPVGAALLTADGAIVTGCNVENASFGLTVCAERVAVQRAV 61
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRS 129
EG +F IAV+ + DS FV PCG+CRQV+ EF S D V + K D S
Sbjct: 62 VEGHRRFTAIAVTCDIEDS--FVGPCGACRQVLMEFGS---DWTVYLTKPDGS 109
>gi|16800568|ref|NP_470836.1| hypothetical protein lin1500 [Listeria innocua Clip11262]
gi|422412951|ref|ZP_16489910.1| cytidine deaminase [Listeria innocua FSL S4-378]
gi|422415966|ref|ZP_16492923.1| cytidine deaminase [Listeria innocua FSL J1-023]
gi|423100547|ref|ZP_17088254.1| cytidine deaminase [Listeria innocua ATCC 33091]
gi|16413973|emb|CAC96731.1| lin1500 [Listeria innocua Clip11262]
gi|313618894|gb|EFR90759.1| cytidine deaminase [Listeria innocua FSL S4-378]
gi|313623744|gb|EFR93886.1| cytidine deaminase [Listeria innocua FSL J1-023]
gi|370792771|gb|EHN60614.1| cytidine deaminase [Listeria innocua ATCC 33091]
Length = 131
Score = 119 bits (299), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 59/108 (54%), Positives = 80/108 (74%), Gaps = 5/108 (4%)
Query: 16 EQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKA 75
E N +L+ QAR+ AY PYSK VGAAL+ +DD + GCN+ENAS+G+T CAE+TAI KA
Sbjct: 3 ENNFISLAKQAREFAYVPYSKFPVGAALVTKDDEVVLGCNIENASFGLTNCAERTAIFKA 62
Query: 76 ISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLI 123
+SEG+ FK++ V A D+ VSPCG+CRQVI+EF +P D+ V++
Sbjct: 63 VSEGKRDFKQLVVVA---DTEGPVSPCGACRQVISEFCAP--DMPVIL 105
>gi|217964391|ref|YP_002350069.1| cytidine deaminase [Listeria monocytogenes HCC23]
gi|290894224|ref|ZP_06557193.1| cytidine deaminase [Listeria monocytogenes FSL J2-071]
gi|386008234|ref|YP_005926512.1| cdd [Listeria monocytogenes L99]
gi|386026835|ref|YP_005947611.1| cytidine deaminase [Listeria monocytogenes M7]
gi|404407901|ref|YP_006690616.1| cytidine deaminase [Listeria monocytogenes SLCC2376]
gi|422409692|ref|ZP_16486653.1| cytidine deaminase [Listeria monocytogenes FSL F2-208]
gi|217333661|gb|ACK39455.1| cytidine deaminase [Listeria monocytogenes HCC23]
gi|290556221|gb|EFD89766.1| cytidine deaminase [Listeria monocytogenes FSL J2-071]
gi|307571044|emb|CAR84223.1| cdd [Listeria monocytogenes L99]
gi|313608751|gb|EFR84570.1| cytidine deaminase [Listeria monocytogenes FSL F2-208]
gi|336023416|gb|AEH92553.1| cytidine deaminase [Listeria monocytogenes M7]
gi|404242050|emb|CBY63450.1| cytidine deaminase [Listeria monocytogenes SLCC2376]
Length = 131
Score = 119 bits (298), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 59/108 (54%), Positives = 80/108 (74%), Gaps = 5/108 (4%)
Query: 16 EQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKA 75
E N +L+ QAR+ AY PYSK VGAAL+ DD + GCN+ENAS+G+T CAE+TAI KA
Sbjct: 3 ENNFISLAKQAREFAYVPYSKFPVGAALVTSDDEVVLGCNIENASFGLTNCAERTAIFKA 62
Query: 76 ISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLI 123
+SEG+ FK++ V A D++ VSPCG+CRQVI+EF +P D+ V++
Sbjct: 63 VSEGKRDFKQLVVVA---DTDGPVSPCGACRQVISEFCAP--DMPVIL 105
>gi|351713658|gb|EHB16577.1| Cytidine deaminase [Heterocephalus glaber]
Length = 145
Score = 119 bits (298), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 65/122 (53%), Positives = 82/122 (67%), Gaps = 6/122 (4%)
Query: 11 ALDPIE-QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEK 69
AL+P Q L S +A+ +AYCPYS VGAALL D IF+GCNVENA Y + ICAE+
Sbjct: 9 ALEPEHVQRLLLSSREAKKSAYCPYSHFPVGAALLTGDGLIFSGCNVENACYALGICAER 68
Query: 70 TAISKAISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRS 129
TAI KAISEG F+ IA+S+ L D F+SPCG+CRQV+ EF + D V + K+D +
Sbjct: 69 TAIQKAISEGHKDFRAIAISSDLQDD--FISPCGACRQVMREFGT---DWAVYMTKADGT 123
Query: 130 QV 131
V
Sbjct: 124 YV 125
>gi|315282360|ref|ZP_07870787.1| cytidine deaminase [Listeria marthii FSL S4-120]
gi|313613992|gb|EFR87709.1| cytidine deaminase [Listeria marthii FSL S4-120]
Length = 131
Score = 119 bits (298), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 59/108 (54%), Positives = 80/108 (74%), Gaps = 5/108 (4%)
Query: 16 EQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKA 75
E N +L+ QAR+ AY PYSK VGAAL+ DD + GCN+ENAS+G+T CAE+TAI KA
Sbjct: 3 ENNFISLAKQAREFAYVPYSKFPVGAALVTTDDEVVLGCNIENASFGLTNCAERTAIFKA 62
Query: 76 ISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLI 123
+SEG+ FK++ V A D++ VSPCG+CRQVI+EF +P D+ V++
Sbjct: 63 VSEGKRDFKQLVVVA---DTDGPVSPCGACRQVISEFCAP--DMPVIL 105
>gi|116872894|ref|YP_849675.1| cytidine deaminase [Listeria welshimeri serovar 6b str. SLCC5334]
gi|116741772|emb|CAK20896.1| cytidine deaminase [Listeria welshimeri serovar 6b str. SLCC5334]
Length = 131
Score = 119 bits (298), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 59/108 (54%), Positives = 80/108 (74%), Gaps = 5/108 (4%)
Query: 16 EQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKA 75
E N +L+ QAR+ AY PYSK VGAAL+ DD + GCN+ENAS+G+T CAE+TAI KA
Sbjct: 3 ENNFISLAKQAREFAYVPYSKFPVGAALVTADDEVVLGCNIENASFGLTNCAERTAIFKA 62
Query: 76 ISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLI 123
+SEG+ FK++ V A D++ VSPCG+CRQVI+EF +P D+ V++
Sbjct: 63 VSEGKRDFKQLVVVA---DTDGPVSPCGACRQVISEFCAP--DMPVIL 105
>gi|347548849|ref|YP_004855177.1| putative cytidine deaminase [Listeria ivanovii subsp. ivanovii PAM
55]
gi|346981920|emb|CBW85901.1| Putative cytidine deaminase [Listeria ivanovii subsp. ivanovii PAM
55]
Length = 131
Score = 119 bits (297), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 59/108 (54%), Positives = 79/108 (73%), Gaps = 5/108 (4%)
Query: 16 EQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKA 75
E N +L+ QAR+ AY PYSK VGAAL+ DD + GCN+ENAS+G+T CAE+TAI KA
Sbjct: 3 ESNFVSLAKQAREFAYVPYSKFPVGAALVTADDEVVLGCNIENASFGLTNCAERTAIFKA 62
Query: 76 ISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLI 123
+SEG+ FK++ V A D+ VSPCG+CRQVI+EF +P D+ V++
Sbjct: 63 VSEGKRDFKQLVVVA---DTEGPVSPCGACRQVISEFCAP--DMPVIL 105
>gi|281210038|gb|EFA84206.1| cytidine deaminase [Polysphondylium pallidum PN500]
Length = 141
Score = 119 bits (297), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 59/109 (54%), Positives = 76/109 (69%), Gaps = 6/109 (5%)
Query: 19 LANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISE 78
L ++ +A+ AYC YS +VGAALLC+D TI +GCNVEN SYG+TICAE+TA +KAISE
Sbjct: 10 LFEVANEAKKRAYCKYSNFRVGAALLCEDGTIISGCNVENGSYGLTICAERTAYTKAISE 69
Query: 79 GQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSD 127
G TKFK I V+ + D +F++PCG+CRQ EF + V VK D
Sbjct: 70 GHTKFKTIVVTTDVED--RFITPCGACRQFGIEFG----NFDVYCVKPD 112
>gi|323490065|ref|ZP_08095286.1| hypothetical protein GPDM_11960 [Planococcus donghaensis MPA1U2]
gi|323396361|gb|EGA89186.1| hypothetical protein GPDM_11960 [Planococcus donghaensis MPA1U2]
gi|456011644|gb|EMF45381.1| Cytidine deaminase [Planococcus halocryophilus Or1]
Length = 136
Score = 119 bits (297), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 59/112 (52%), Positives = 77/112 (68%), Gaps = 3/112 (2%)
Query: 16 EQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKA 75
++ L SI+AR+NAY PYSK VGAALL D ++ GCN+ENA Y +T CAE+TA+ KA
Sbjct: 3 KEQLMKQSIEARNNAYVPYSKFPVGAALLTADGKVYLGCNIENAGYSLTNCAERTAVFKA 62
Query: 76 ISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSD 127
+SEG KF +AVSA D+ VSPCG+CRQV+AEF P + + +K D
Sbjct: 63 VSEGDNKFVALAVSA---DTAGPVSPCGACRQVLAEFCPPNMPVYLTNLKGD 111
>gi|422809544|ref|ZP_16857955.1| Cytidine deaminase [Listeria monocytogenes FSL J1-208]
gi|378753158|gb|EHY63743.1| Cytidine deaminase [Listeria monocytogenes FSL J1-208]
Length = 131
Score = 119 bits (297), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 59/108 (54%), Positives = 80/108 (74%), Gaps = 5/108 (4%)
Query: 16 EQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKA 75
E N +L+ QAR+ AY PYSK VGAAL+ DD + GCN+ENAS+G+T CAE+TAI KA
Sbjct: 3 ENNFISLAKQAREFAYVPYSKFPVGAALVTSDDEVVLGCNIENASFGLTNCAERTAIFKA 62
Query: 76 ISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLI 123
+SEG+ FK++ V A D++ VSPCG+CRQVI+EF +P D+ V++
Sbjct: 63 VSEGKRDFKQLVVIA---DTDGPVSPCGACRQVISEFCAP--DMPVIL 105
>gi|371535227|gb|AEX32920.1| cytidine deaminase [Hypophthalmichthys nobilis]
Length = 154
Score = 119 bits (297), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 59/115 (51%), Positives = 80/115 (69%), Gaps = 5/115 (4%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
+ L S++A+ AYCPYSK +VGAALL D T+FTGCNVENA + + +CAE+TAISKA+
Sbjct: 17 KELIRKSLEAKKFAYCPYSKFRVGAALLTHDGTVFTGCNVENACFNLGLCAERTAISKAV 76
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQV 131
SEG T FK IA+++ + + F+SPCG CRQ + EF + + V + K D S V
Sbjct: 77 SEGYTDFKAIAIASDMCE--HFISPCGGCRQFMREFGA---NWDVYLSKPDGSYV 126
>gi|289434745|ref|YP_003464617.1| hypothetical protein lse_1380 [Listeria seeligeri serovar 1/2b str.
SLCC3954]
gi|289170989|emb|CBH27531.1| cdd [Listeria seeligeri serovar 1/2b str. SLCC3954]
Length = 131
Score = 119 bits (297), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 59/108 (54%), Positives = 79/108 (73%), Gaps = 5/108 (4%)
Query: 16 EQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKA 75
E N +L+ QAR+ AY PYSK VGAAL+ DD + GCN+ENAS+G+T CAE+TAI KA
Sbjct: 3 ENNFISLAKQAREFAYVPYSKFPVGAALVTADDEVVLGCNIENASFGLTNCAERTAIFKA 62
Query: 76 ISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLI 123
+SEG+ FK++ V A D+ VSPCG+CRQVI+EF +P D+ V++
Sbjct: 63 VSEGKRDFKQLVVVA---DTEGPVSPCGACRQVISEFCAP--DMPVIL 105
>gi|222087951|gb|ACM41838.1| cytidine deaminase [Epinephelus coioides]
Length = 176
Score = 118 bits (296), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 62/117 (52%), Positives = 82/117 (70%), Gaps = 6/117 (5%)
Query: 23 SIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQTK 82
S +A+ AYCPYSK +VGAALL D+ +FTGCNVENA Y + +CAE+TAISKA+SEG
Sbjct: 44 SQKAKQQAYCPYSKFRVGAALLTLDNCVFTGCNVENACYNLGLCAERTAISKAVSEGYRS 103
Query: 83 FKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQVGLITIDGM 139
FK IA+++ L D +F+SPCG CRQ I EF S + V + K D S + + T+D +
Sbjct: 104 FKAIAIASDLND--QFISPCGGCRQFIREFGS---NWDVYLSKPDGSYLKM-TVDEL 154
>gi|410907033|ref|XP_003966996.1| PREDICTED: cytidine deaminase-like [Takifugu rubripes]
Length = 266
Score = 118 bits (296), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 59/111 (53%), Positives = 76/111 (68%), Gaps = 5/111 (4%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
+ L + +QAR+ AYCPYS+ VGAA+L D I TGCNVENAS+G+T+CAE+ A+ +A+
Sbjct: 137 KELVSKCLQARNAAYCPYSRFPVGAAVLTPDGAIITGCNVENASFGLTVCAERVAVQRAV 196
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSD 127
EG KF IAVS + DS FV PCG+CRQV+ EF S D V + K D
Sbjct: 197 VEGYRKFTAIAVSCDIEDS--FVGPCGACRQVLMEFGS---DWVVYLTKPD 242
>gi|403069946|ref|ZP_10911278.1| cytidine:deoxycytidine deaminase [Oceanobacillus sp. Ndiop]
Length = 134
Score = 118 bits (296), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 59/136 (43%), Positives = 86/136 (63%), Gaps = 3/136 (2%)
Query: 15 IEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISK 74
I + L +++ R+ AY PYSK QVGAALL + ++TGCN+ENA+Y +T CAE+ AI K
Sbjct: 2 INKELVEAALKIREQAYVPYSKFQVGAALLTKSGKVYTGCNIENAAYPVTCCAERVAIFK 61
Query: 75 AISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQVGLI 134
AISEG+T+F+ +AV+A DS + V PCGSCRQV++EF +I + +K++ +
Sbjct: 62 AISEGETEFQELAVAA---DSARPVPPCGSCRQVMSEFFPKTMNIHLTNLKNETKTFTME 118
Query: 135 TIDGMYLTLHCCWERG 150
+ H E G
Sbjct: 119 ELLPFSFETHDMPENG 134
>gi|334339734|ref|YP_004544714.1| cytidine deaminase [Desulfotomaculum ruminis DSM 2154]
gi|334091088|gb|AEG59428.1| cytidine deaminase [Desulfotomaculum ruminis DSM 2154]
Length = 128
Score = 118 bits (296), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 57/96 (59%), Positives = 73/96 (76%), Gaps = 3/96 (3%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
+ L +++++AR+ AY PYSK +VGAAL D IFTGCNVENASYG+T CAE+TA+ KAI
Sbjct: 6 ERLIHMALEAREKAYVPYSKFKVGAALATSDGRIFTGCNVENASYGLTCCAERTALFKAI 65
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEF 112
SEG +F IAV A +PD SPCG+CRQV++EF
Sbjct: 66 SEGCREFDSIAVVADVPD---LCSPCGACRQVLSEF 98
>gi|422419067|ref|ZP_16496022.1| cytidine deaminase [Listeria seeligeri FSL N1-067]
gi|313633220|gb|EFS00092.1| cytidine deaminase [Listeria seeligeri FSL N1-067]
Length = 135
Score = 118 bits (296), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 59/108 (54%), Positives = 79/108 (73%), Gaps = 5/108 (4%)
Query: 16 EQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKA 75
E N +L+ QAR+ AY PYSK VGAAL+ DD + GCN+ENAS+G+T CAE+TAI KA
Sbjct: 7 ENNFISLAKQAREFAYVPYSKFPVGAALVTADDEVVLGCNIENASFGLTNCAERTAIFKA 66
Query: 76 ISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLI 123
+SEG+ FK++ V A D+ VSPCG+CRQVI+EF +P D+ V++
Sbjct: 67 VSEGKRDFKQLVVVA---DTEGPVSPCGACRQVISEFCAP--DMPVIL 109
>gi|225706728|gb|ACO09210.1| Cytidine deaminase [Osmerus mordax]
Length = 166
Score = 118 bits (295), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 59/129 (45%), Positives = 86/129 (66%), Gaps = 5/129 (3%)
Query: 15 IEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISK 74
+++ L S++AR AYCPYS +VGAALL D ++FTGCNVEN+ + + +CAE+ AISK
Sbjct: 28 LKEGLVARSLEARQFAYCPYSSFRVGAALLTPDGSVFTGCNVENSCHNLGVCAERNAISK 87
Query: 75 AISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQVGLI 134
A+SEG FK IA+++ L D +F+SPCG CRQ + EF + D +V + K D S + +
Sbjct: 88 AVSEGYRSFKAIAIASDLQD--QFISPCGGCRQFMREFGT---DWEVYMSKPDGSYLEMR 142
Query: 135 TIDGMYLTL 143
D + L+
Sbjct: 143 VRDLLPLSF 151
>gi|310659079|ref|YP_003936800.1| cytidine deaminase [[Clostridium] sticklandii]
gi|308825857|emb|CBH21895.1| cytidine deaminase [[Clostridium] sticklandii]
Length = 130
Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 60/121 (49%), Positives = 86/121 (71%), Gaps = 6/121 (4%)
Query: 19 LANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISE 78
L L+ QA++NAY PYSK +VGAALL ++ ++TGCNVE AS+G T CAE+TAI KAISE
Sbjct: 6 LLELAEQAKENAYVPYSKFKVGAALLTKNGKVYTGCNVEVASFGATNCAERTAIFKAISE 65
Query: 79 GQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQVGLITIDG 138
G+T+F++IAV++ D PCG CRQVI EFS D+++++ + ++ + TID
Sbjct: 66 GETEFEKIAVASSNDDE---TFPCGICRQVIVEFSK---DLKIILGSTSKNIIKEYTIDD 119
Query: 139 M 139
+
Sbjct: 120 L 120
>gi|110776829|ref|XP_001119936.1| PREDICTED: cytidine deaminase-like [Apis mellifera]
Length = 148
Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 62/128 (48%), Positives = 82/128 (64%), Gaps = 5/128 (3%)
Query: 12 LDPIEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTA 71
++P Q+L +I AR+ +Y PYSK + GAA+LC D +IFTGCNVENASY + CAE+TA
Sbjct: 12 IEPDIQSLIKKTIAAREYSYSPYSKFKAGAAILCDDGSIFTGCNVENASYPVGTCAERTA 71
Query: 72 ISKAISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQV 131
I KA+SEG+ KFK + V A +N F +PCG CRQ IAEF DI + + D V
Sbjct: 72 IVKAVSEGKRKFKVLTVVAD-KKNNIFTTPCGFCRQAIAEFG----DILIYLTGPDMKNV 126
Query: 132 GLITIDGM 139
T+ +
Sbjct: 127 LKTTLSNL 134
>gi|159146785|gb|ABW90692.1| cytidine deaminase [Haliotis diversicolor supertexta]
Length = 149
Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 57/111 (51%), Positives = 74/111 (66%), Gaps = 6/111 (5%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
Q + S + + AYCPYSK VGAALL +D T+FTGCNVENASYG++ICAE+TAI KA+
Sbjct: 10 QKILKASHEVKKMAYCPYSKFPVGAALLTEDGTVFTGCNVENASYGLSICAERTAIVKAV 69
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSD 127
SEG KF IA+++ D + + PCG CRQ + EF D + + K D
Sbjct: 70 SEGHRKFTAIAIAS---DMKEMIVPCGVCRQSLVEF---GVDWDMYMTKPD 114
>gi|313893983|ref|ZP_07827549.1| cytidine deaminase [Veillonella sp. oral taxon 158 str. F0412]
gi|313441547|gb|EFR59973.1| cytidine deaminase [Veillonella sp. oral taxon 158 str. F0412]
Length = 131
Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 58/99 (58%), Positives = 71/99 (71%), Gaps = 3/99 (3%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
Q L + + AR+ AY PYS VGAALLC+ I+ GCN+ENASYG+T CAE+TAI KA+
Sbjct: 7 QKLIDRAAVAREKAYSPYSHFGVGAALLCEGGAIYEGCNIENASYGLTNCAERTAIFKAV 66
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSP 115
SEG T+FK IAV A D+ SPCG+CRQVI+EF P
Sbjct: 67 SEGHTEFKAIAVVA---DTEGPCSPCGACRQVISEFEIP 102
>gi|300854993|ref|YP_003779977.1| cytidine deaminase [Clostridium ljungdahlii DSM 13528]
gi|300435108|gb|ADK14875.1| cytidine deaminase [Clostridium ljungdahlii DSM 13528]
Length = 132
Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 56/115 (48%), Positives = 77/115 (66%), Gaps = 5/115 (4%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
+NL + + + R NAY PYS +VGAA+L +D ++TGCN+ENASYG T CAE+TAI KAI
Sbjct: 4 KNLVSKAFEGRKNAYAPYSNFKVGAAVLAEDGKVYTGCNIENASYGATNCAERTAIFKAI 63
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQV 131
SEG K IA+ + N + PCG CRQVIAEF+S D ++++ K + +
Sbjct: 64 SEGNRAIKAIAIVGV---ENDYTYPCGVCRQVIAEFASK--DAEIILGKGESEYI 113
>gi|357639383|ref|ZP_09137256.1| cytidine deaminase [Streptococcus urinalis 2285-97]
gi|418416554|ref|ZP_12989753.1| cytidine deaminase [Streptococcus urinalis FB127-CNA-2]
gi|357587837|gb|EHJ57245.1| cytidine deaminase [Streptococcus urinalis 2285-97]
gi|410874372|gb|EKS22303.1| cytidine deaminase [Streptococcus urinalis FB127-CNA-2]
Length = 129
Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 57/125 (45%), Positives = 83/125 (66%), Gaps = 6/125 (4%)
Query: 15 IEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISK 74
+E +L +L+ A NAY PYS +GAA+ +D IFTGCN+ENAS+G+T C E+TAI K
Sbjct: 2 VENDLVSLAKNASKNAYVPYSHFPIGAAVKTKDGKIFTGCNIENASFGLTNCGERTAIFK 61
Query: 75 AISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQVGLI 134
A+SEG T F I AI ++ + VSPCG+CRQV+AEF P+ + ++ S + + +
Sbjct: 62 AVSEGYTNFSEI---AIYGEAEEPVSPCGACRQVMAEFFEPSAKVTLI---SKKGETVEM 115
Query: 135 TIDGM 139
T+ G+
Sbjct: 116 TVGGL 120
>gi|381181733|ref|ZP_09890566.1| cytidine deaminase [Treponema saccharophilum DSM 2985]
gi|380766519|gb|EIC00525.1| cytidine deaminase [Treponema saccharophilum DSM 2985]
Length = 129
Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 55/98 (56%), Positives = 71/98 (72%), Gaps = 3/98 (3%)
Query: 16 EQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKA 75
++ L +++ AR NAY PYSK QVGAALLC D T+FTGCN+E+ASY IC E+TA+SKA
Sbjct: 3 DKELVEMALDARKNAYTPYSKYQVGAALLCDDGTVFTGCNIESASYPCGICGERTAMSKA 62
Query: 76 ISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFS 113
ISEG KF +IA++ S K +PCG CRQ + EF+
Sbjct: 63 ISEGHIKFTKIAIAG---SSEKICTPCGMCRQFMYEFN 97
>gi|321458591|gb|EFX69657.1| hypothetical protein DAPPUDRAFT_61988 [Daphnia pulex]
Length = 139
Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 55/89 (61%), Positives = 68/89 (76%), Gaps = 2/89 (2%)
Query: 25 QARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQTKFK 84
+ R+ AYCPYS VGAALLC D I GCNVEN SYG+TICAE++AI KA+S+GQ FK
Sbjct: 10 EVREKAYCPYSNFSVGAALLCGDGEIIDGCNVENVSYGLTICAERSAICKAVSQGQKVFK 69
Query: 85 RIAVSAILPDSNKFVSPCGSCRQVIAEFS 113
IA+ A + + FVSPCG+CRQV+AEF+
Sbjct: 70 SIAICAEMKE--HFVSPCGACRQVLAEFN 96
>gi|45387777|ref|NP_991242.1| cytidine deaminase [Danio rerio]
gi|41107631|gb|AAH65476.1| Cytidine deaminase [Danio rerio]
Length = 159
Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 59/115 (51%), Positives = 79/115 (68%), Gaps = 5/115 (4%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
+ L S +A+ AYCPYSK +VGAALL D T+FTGCNVENA + + ICAE+ AISKA+
Sbjct: 22 KELTRKSQEAKKFAYCPYSKFRVGAALLTHDGTVFTGCNVENACFNLGICAERVAISKAV 81
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQV 131
SEG FK IA+++ + ++ F+SPCG CRQ + EF S + +V + K D S V
Sbjct: 82 SEGYRDFKAIAIASDMCEN--FISPCGGCRQFMREFGS---NWEVYLSKPDGSYV 131
>gi|315303201|ref|ZP_07873858.1| cytidine deaminase [Listeria ivanovii FSL F6-596]
gi|313628428|gb|EFR96904.1| cytidine deaminase [Listeria ivanovii FSL F6-596]
Length = 135
Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 58/108 (53%), Positives = 79/108 (73%), Gaps = 5/108 (4%)
Query: 16 EQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKA 75
E N +L+ QAR+ AY PYS+ VGAAL+ DD + GCN+ENAS+G+T CAE+TAI KA
Sbjct: 7 ESNFISLAKQAREFAYVPYSEFPVGAALVTTDDEVILGCNIENASFGLTNCAERTAIFKA 66
Query: 76 ISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLI 123
+SEG+ FK++ V A D+ VSPCG+CRQVI+EF +P D+ V++
Sbjct: 67 VSEGKRDFKQLVVVA---DTEGPVSPCGACRQVISEFCAP--DMPVIL 109
>gi|157693030|ref|YP_001487492.1| cytidine deaminase [Bacillus pumilus SAFR-032]
gi|157681788|gb|ABV62932.1| cytidine deaminase [Bacillus pumilus SAFR-032]
Length = 132
Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 59/109 (54%), Positives = 81/109 (74%), Gaps = 5/109 (4%)
Query: 16 EQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKA 75
+Q L + +I+ARD AY PYSK +VGAALL D T++ GCN+ENA+YGM CAE+TA+ KA
Sbjct: 3 KQELISEAIKARDFAYVPYSKFKVGAALLSNDGTVYGGCNIENAAYGMCNCAERTALFKA 62
Query: 76 ISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIV 124
SEG T F+ +AV A D+++ VSPCG+CRQVI+E +P D+ V++
Sbjct: 63 YSEGITSFQMLAVVA---DTDRPVSPCGACRQVISELCAP--DMPVILT 106
>gi|42527436|ref|NP_972534.1| cytidine deaminase [Treponema denticola ATCC 35405]
gi|449104916|ref|ZP_21741638.1| cytidine deaminase [Treponema denticola AL-2]
gi|449109023|ref|ZP_21745662.1| cytidine deaminase [Treponema denticola ATCC 33520]
gi|449111557|ref|ZP_21748150.1| cytidine deaminase [Treponema denticola ATCC 33521]
gi|449113629|ref|ZP_21750116.1| cytidine deaminase [Treponema denticola ATCC 35404]
gi|449116217|ref|ZP_21752668.1| cytidine deaminase [Treponema denticola H-22]
gi|449119707|ref|ZP_21756102.1| cytidine deaminase [Treponema denticola H1-T]
gi|449122097|ref|ZP_21758443.1| cytidine deaminase [Treponema denticola MYR-T]
gi|449131630|ref|ZP_21767840.1| cytidine deaminase [Treponema denticola SP37]
gi|41818021|gb|AAS12445.1| cytidine deaminase [Treponema denticola ATCC 35405]
gi|448938987|gb|EMB19913.1| cytidine deaminase [Treponema denticola SP37]
gi|448949010|gb|EMB29836.1| cytidine deaminase [Treponema denticola H1-T]
gi|448949538|gb|EMB30363.1| cytidine deaminase [Treponema denticola MYR-T]
gi|448954104|gb|EMB34887.1| cytidine deaminase [Treponema denticola H-22]
gi|448957530|gb|EMB38271.1| cytidine deaminase [Treponema denticola ATCC 33521]
gi|448958545|gb|EMB39275.1| cytidine deaminase [Treponema denticola ATCC 35404]
gi|448960296|gb|EMB41011.1| cytidine deaminase [Treponema denticola ATCC 33520]
gi|448962192|gb|EMB42885.1| cytidine deaminase [Treponema denticola AL-2]
Length = 136
Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 60/124 (48%), Positives = 81/124 (65%), Gaps = 5/124 (4%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
+NL +++A AY PYS VGAA+L +D +I TG N+EN SYG+T CAE+TAI KA+
Sbjct: 8 ENLFKTALEAAKKAYAPYSNFHVGAAILLEDGSIVTGVNIENRSYGLTNCAERTAIFKAV 67
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQVGLITI 136
SEG+T FK IA++ PD++ VSPCG+CRQVI+EF + I S V L +
Sbjct: 68 SEGKTDFKAIAIAT--PDADYPVSPCGACRQVISEFMGGDTPV---IFGSSLDNVVLTDV 122
Query: 137 DGMY 140
G+Y
Sbjct: 123 KGIY 126
>gi|407474265|ref|YP_006788665.1| cytidine deaminase Cdd [Clostridium acidurici 9a]
gi|407050773|gb|AFS78818.1| cytidine deaminase Cdd [Clostridium acidurici 9a]
Length = 129
Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 57/107 (53%), Positives = 79/107 (73%), Gaps = 7/107 (6%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
+NL N +I+A++ AY PYSK +VG+A+L +D I+TGCN+E+ASY TICAE+TAISKA+
Sbjct: 4 KNLINKAIEAKEKAYAPYSKFKVGSAVLTKDGKIYTGCNIESASYTPTICAERTAISKAV 63
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLI 123
SEG +F+ IA+ S+ + PCG CRQVI EFS DI+V++
Sbjct: 64 SEGDREFEAIAIVG----SSDYTFPCGVCRQVIREFSK---DIKVIV 103
>gi|449105108|ref|ZP_21741818.1| cytidine deaminase [Treponema denticola ASLM]
gi|451969423|ref|ZP_21922652.1| cytidine deaminase [Treponema denticola US-Trep]
gi|448967436|gb|EMB48072.1| cytidine deaminase [Treponema denticola ASLM]
gi|451701812|gb|EMD56271.1| cytidine deaminase [Treponema denticola US-Trep]
Length = 136
Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 60/124 (48%), Positives = 81/124 (65%), Gaps = 5/124 (4%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
+NL +++A AY PYS VGAA+L +D +I TG N+EN SYG+T CAE+TAI KA+
Sbjct: 8 ENLFKTALEAAKKAYVPYSNFHVGAAILLEDGSIVTGVNIENRSYGLTNCAERTAIFKAV 67
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQVGLITI 136
SEG+T FK IA++ PD++ VSPCG+CRQVI+EF + I S V L +
Sbjct: 68 SEGKTDFKAIAIAT--PDADYPVSPCGACRQVISEFMGGDTPV---IFGSSLDNVVLTDV 122
Query: 137 DGMY 140
G+Y
Sbjct: 123 KGIY 126
>gi|389815825|ref|ZP_10207073.1| hypothetical protein A1A1_03392 [Planococcus antarcticus DSM 14505]
gi|388465548|gb|EIM07864.1| hypothetical protein A1A1_03392 [Planococcus antarcticus DSM 14505]
Length = 136
Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 58/112 (51%), Positives = 74/112 (66%), Gaps = 3/112 (2%)
Query: 16 EQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKA 75
++ L +I AR NAY PYSK VGAALL D ++ GCN+ENA Y MT CAE+TA+ KA
Sbjct: 3 KEQLMKQAIAARSNAYVPYSKFPVGAALLTTDGKVYLGCNIENAGYSMTNCAERTAVFKA 62
Query: 76 ISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSD 127
+SEG F +AVSA P VSPCG+CRQV+AEF +P + + +K D
Sbjct: 63 VSEGDKTFMALAVSADTPGP---VSPCGACRQVLAEFCAPDMPVYLTNLKGD 111
>gi|422342382|ref|ZP_16423322.1| cytidine deaminase [Treponema denticola F0402]
gi|449123953|ref|ZP_21760274.1| cytidine deaminase [Treponema denticola OTK]
gi|325473697|gb|EGC76886.1| cytidine deaminase [Treponema denticola F0402]
gi|448943743|gb|EMB24630.1| cytidine deaminase [Treponema denticola OTK]
Length = 136
Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 60/124 (48%), Positives = 81/124 (65%), Gaps = 5/124 (4%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
+NL +++A AY PYS VGAA+L +D +I TG N+EN SYG+T CAE+TAI KA+
Sbjct: 8 ENLFKTALEAAKKAYAPYSNFHVGAAILLEDGSIVTGVNIENRSYGLTNCAERTAIFKAV 67
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQVGLITI 136
SEG+T FK IA++ PD++ VSPCG+CRQVI+EF + I S V L +
Sbjct: 68 SEGKTYFKAIAIAT--PDADYPVSPCGACRQVISEFMGGDTPV---IFGSSLDNVVLTDV 122
Query: 137 DGMY 140
G+Y
Sbjct: 123 KGIY 126
>gi|170032339|ref|XP_001844039.1| cytidine deaminase [Culex quinquefasciatus]
gi|167872325|gb|EDS35708.1| cytidine deaminase [Culex quinquefasciatus]
Length = 156
Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 61/144 (42%), Positives = 88/144 (61%), Gaps = 5/144 (3%)
Query: 3 GHDIMEFSALDPIEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYG 62
G ++EFS+LD Q L +I+ R+NAYCPYS VGAAL + I TGCNVEN ++G
Sbjct: 11 GESVVEFSSLDAKVQELVEAAIKVRNNAYCPYSNFSVGAALRTKSGEIITGCNVENGTFG 70
Query: 63 MTICAEKTAISKAISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVL 122
++CAE+ AI AI +G +F+ +AV A +F SPCG+CRQ +AEF S ++ +
Sbjct: 71 PSVCAERAAICTAIGQGVREFEAVAVVAY--QEKEFTSPCGTCRQTLAEFCSK--NMPIY 126
Query: 123 IVKSDRSQVGLITIDGMYLTLHCC 146
+ K ++V ++T G L C
Sbjct: 127 LAKPSPARV-MVTSLGQLLPHAFC 149
>gi|313890073|ref|ZP_07823708.1| cytidine deaminase [Streptococcus pseudoporcinus SPIN 20026]
gi|416852233|ref|ZP_11909378.1| cytidine deaminase [Streptococcus pseudoporcinus LQ 940-04]
gi|313121434|gb|EFR44538.1| cytidine deaminase [Streptococcus pseudoporcinus SPIN 20026]
gi|356739722|gb|EHI64954.1| cytidine deaminase [Streptococcus pseudoporcinus LQ 940-04]
Length = 129
Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 58/120 (48%), Positives = 78/120 (65%), Gaps = 4/120 (3%)
Query: 15 IEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISK 74
+ L + +I+A AY PYSK VGAALL D +FTGCN+ENAS+G+T CAE+TAI K
Sbjct: 2 VATKLESAAIEASKYAYVPYSKFPVGAALLTSDGKLFTGCNIENASFGLTNCAERTAIFK 61
Query: 75 AISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQVGLI 134
A+SEG + I AI ++ + VSPCG+CRQV+AEF P + LI K R+ + +
Sbjct: 62 AVSEGHKELSEI---AIFGETQEPVSPCGACRQVMAEFFEPTAKV-TLIAKDGRTTLTTV 117
>gi|384484820|gb|EIE77000.1| cytidine deaminase [Rhizopus delemar RA 99-880]
Length = 143
Score = 116 bits (290), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 58/123 (47%), Positives = 83/123 (67%), Gaps = 7/123 (5%)
Query: 12 LDPIEQNLAN----LSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICA 67
+ PI Q+L + S++A++ +Y PYSK +VGAALL +D TI TGCN+ENAS+G ICA
Sbjct: 1 MAPITQDLKDSLFQKSLKAKEYSYSPYSKFRVGAALLAEDGTIITGCNIENASFGGAICA 60
Query: 68 EKTAISKAISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSD 127
E+TA KA+SEG KF +AVS+ D F++PCG CRQ I+EF S + + ++ K +
Sbjct: 61 ERTAFVKAVSEGIHKFVALAVSS---DQEDFITPCGICRQFISEFVSESLPVYLVNTKGE 117
Query: 128 RSQ 130
+
Sbjct: 118 HRE 120
>gi|134300319|ref|YP_001113815.1| cytidine deaminase [Desulfotomaculum reducens MI-1]
gi|134053019|gb|ABO50990.1| cytidine deaminase [Desulfotomaculum reducens MI-1]
Length = 142
Score = 116 bits (290), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 55/97 (56%), Positives = 73/97 (75%), Gaps = 3/97 (3%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
+ L ++ +AR+ AY PYSK +VGAALL Q+ +FTGCNVENAS+G+T CAE+TAI KA+
Sbjct: 6 EKLIEMAKEAREKAYVPYSKFKVGAALLTQEGKVFTGCNVENASFGLTCCAERTAIFKAV 65
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFS 113
SEG +F +AV A +P SPCG+CRQV+AEF+
Sbjct: 66 SEGNREFVALAVIADVPT---LCSPCGACRQVMAEFA 99
>gi|392957850|ref|ZP_10323370.1| cytidine deaminase [Bacillus macauensis ZFHKF-1]
gi|391876199|gb|EIT84799.1| cytidine deaminase [Bacillus macauensis ZFHKF-1]
Length = 132
Score = 116 bits (290), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 57/105 (54%), Positives = 75/105 (71%), Gaps = 3/105 (2%)
Query: 23 SIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQTK 82
+++AR AY PYSK QVGAALL ++D +F GCNVENASYG+T CAE+TAI KA+SEG+
Sbjct: 10 AVKARQKAYVPYSKFQVGAALLTENDLLFLGCNVENASYGLTNCAERTAIFKAVSEGEQT 69
Query: 83 FKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSD 127
K + AI+ D+ +SPCG+CRQVIAEF + I + + D
Sbjct: 70 IKAM---AIVGDTEGPISPCGACRQVIAEFCNEQTKIYLANLNGD 111
>gi|392530149|ref|ZP_10277286.1| cytidine deaminase [Carnobacterium maltaromaticum ATCC 35586]
gi|414085011|ref|YP_006993722.1| cytidine deaminase [Carnobacterium maltaromaticum LMA28]
gi|412998598|emb|CCO12407.1| cytidine deaminase [Carnobacterium maltaromaticum LMA28]
Length = 130
Score = 116 bits (290), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 54/105 (51%), Positives = 76/105 (72%), Gaps = 3/105 (2%)
Query: 23 SIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQTK 82
+I ARD AY PYSK +VGA L+ DD ++TGCN+ENASYG++ CAE+TAI KA+S G+
Sbjct: 10 AILARDTAYVPYSKFKVGACLVTTDDQMYTGCNIENASYGLSNCAERTAIFKAVSTGERT 69
Query: 83 FKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSD 127
FK + ++ D++ ++PCG+CRQVIAEF SP + + +K D
Sbjct: 70 FKHLVITG---DTDGPIAPCGACRQVIAEFCSPEMPVTLCNLKGD 111
>gi|410460486|ref|ZP_11314164.1| cytidine deaminase [Bacillus azotoformans LMG 9581]
gi|409927101|gb|EKN64247.1| cytidine deaminase [Bacillus azotoformans LMG 9581]
Length = 136
Score = 115 bits (289), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 57/109 (52%), Positives = 76/109 (69%), Gaps = 3/109 (2%)
Query: 19 LANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISE 78
L + +AR+ AY PYSK +VGAALL ++D + GCN+ENASYG+T CAE+TA+ KA SE
Sbjct: 10 LVEKAKEAREMAYVPYSKFKVGAALLTEEDDVIKGCNIENASYGLTNCAERTALFKAYSE 69
Query: 79 GQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSD 127
G KFK +AV A D+ + V PCG+CRQV+AEF P + + +K D
Sbjct: 70 GIKKFKALAVVA---DTERPVPPCGACRQVMAEFCPPNMPVYLTNLKGD 115
>gi|444728065|gb|ELW68529.1| Cytidine deaminase [Tupaia chinensis]
Length = 146
Score = 115 bits (289), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 60/115 (52%), Positives = 78/115 (67%), Gaps = 5/115 (4%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
Q L S +A+ +AYCPYS VGAALL +D IFTGCNVENA Y + +CAE+TA+ KAI
Sbjct: 16 QQLLLSSREAKKSAYCPYSHFPVGAALLTEDGRIFTGCNVENACYPLGVCAERTALQKAI 75
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQV 131
SEG +F+ IA+S+ L D F+SPCG+CRQV+ EF + V + K D + V
Sbjct: 76 SEGYKRFRAIAISSDLQDD--FISPCGACRQVMREFGT---SWAVYMTKPDGTYV 125
>gi|348508072|ref|XP_003441579.1| PREDICTED: cytidine deaminase-like [Oreochromis niloticus]
Length = 165
Score = 115 bits (289), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 56/115 (48%), Positives = 79/115 (68%), Gaps = 5/115 (4%)
Query: 19 LANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISE 78
L LS +A+ YCPYSK +VGAALL D+++ TGCNVENASY + +CAE+ I+KA+SE
Sbjct: 29 LIQLSHEAKKQTYCPYSKFRVGAALLTLDNSLLTGCNVENASYNLGMCAERNVIAKAVSE 88
Query: 79 GQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQVGL 133
G FK IA+++ +S++F+SPCG CRQ + EF S + V + K D S + +
Sbjct: 89 GHRGFKAIAIAS--DESDQFISPCGGCRQFMREFGS---NWDVYLTKPDGSYMKM 138
>gi|194759634|ref|XP_001962052.1| GF15273 [Drosophila ananassae]
gi|190615749|gb|EDV31273.1| GF15273 [Drosophila ananassae]
Length = 158
Score = 115 bits (289), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 54/110 (49%), Positives = 72/110 (65%), Gaps = 2/110 (1%)
Query: 3 GHDIMEFSALDPIEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYG 62
G ++ EF +LDP Q L + + +AR AYCPYS VGAAL D TI++GCN+EN +Y
Sbjct: 12 GLNVREFDSLDPAIQELIHAATEARKQAYCPYSNFAVGAALRTSDGTIYSGCNIENGAYA 71
Query: 63 MTICAEKTAISKAISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEF 112
ICAE+TA KAISEG+ F +A + + N F +PCG CRQ ++EF
Sbjct: 72 TCICAERTAAVKAISEGKRDF--VACAVVAQQDNGFTTPCGVCRQFLSEF 119
>gi|169343676|ref|ZP_02864675.1| cytidine deaminase [Clostridium perfringens C str. JGS1495]
gi|169298236|gb|EDS80326.1| cytidine deaminase [Clostridium perfringens C str. JGS1495]
Length = 132
Score = 115 bits (289), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 57/113 (50%), Positives = 79/113 (69%), Gaps = 4/113 (3%)
Query: 15 IEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISK 74
+++ L +++AR+ AYCPYS +VGAA+L +D I+TGCNVENAS+G T CAE+TAI K
Sbjct: 1 MKKELIKKALEARELAYCPYSNFKVGAAVLFEDGKIYTGCNVENASFGATNCAERTAIFK 60
Query: 75 AISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSD 127
+SEG K + A++ D N + PCG CRQVI EF+ DI++ IVKS+
Sbjct: 61 GVSEGARVLKAM---ALVGDLNSYTYPCGICRQVIVEFAEDK-DIKIFIVKSE 109
>gi|443631825|ref|ZP_21116005.1| cytidine deaminase [Bacillus subtilis subsp. inaquosorum KCTC
13429]
gi|443347940|gb|ELS61997.1| cytidine deaminase [Bacillus subtilis subsp. inaquosorum KCTC
13429]
Length = 136
Score = 115 bits (288), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 59/125 (47%), Positives = 87/125 (69%), Gaps = 8/125 (6%)
Query: 16 EQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKA 75
+Q L +++ARD AY PYSK QVGAALL +D ++ GCN+ENA+Y M CAE+TA+ KA
Sbjct: 3 KQELITEALKARDMAYAPYSKFQVGAALLTKDGKVYKGCNIENAAYSMCNCAERTALFKA 62
Query: 76 ISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSD-RSQVGLI 134
+SEG T+F+ +AV+A P VSPCG+CRQVI+E C V++V ++ + Q+ +
Sbjct: 63 VSEGDTEFQMLAVAADTPGP---VSPCGACRQVISEL----CTKDVIVVLTNLQGQIKEM 115
Query: 135 TIDGM 139
T++ +
Sbjct: 116 TVEEL 120
>gi|398306988|ref|ZP_10510574.1| cytidine/deoxycytidine deaminase [Bacillus vallismortis DV1-F-3]
Length = 136
Score = 115 bits (288), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 59/124 (47%), Positives = 86/124 (69%), Gaps = 8/124 (6%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
Q L +++ARD AY PYSK QVGAALL +D ++ GCN+ENA+Y M CAE+TA+ KA+
Sbjct: 4 QELITEALKARDMAYVPYSKFQVGAALLTKDGKVYRGCNIENAAYSMCNCAERTALFKAV 63
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSD-RSQVGLIT 135
SEG T+F+ +AV+A P VSPCG+CRQVI+E C V++V ++ + Q+ +T
Sbjct: 64 SEGDTEFQMLAVAADTPGP---VSPCGACRQVISEL----CTKDVIVVMTNLQGQIKEMT 116
Query: 136 IDGM 139
++ +
Sbjct: 117 VEEL 120
>gi|221090371|ref|XP_002167076.1| PREDICTED: probable cytidine deaminase-like [Hydra magnipapillata]
Length = 142
Score = 115 bits (288), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 57/114 (50%), Positives = 75/114 (65%), Gaps = 6/114 (5%)
Query: 18 NLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAIS 77
NL + I+A++N+Y PYSK +VGAAL FTGCNVEN SYG+ ICAE+TA KA+S
Sbjct: 12 NLLDSCIKAKENSYSPYSKFRVGAALYTTCGKTFTGCNVENVSYGLAICAERTAYVKAVS 71
Query: 78 EGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQV 131
EG T FK AVS + DS F PCG+CRQ ++EF D++V + D++
Sbjct: 72 EGYTSFKACAVSTDVKDS--FTYPCGACRQFMSEFG----DVEVFLTNDDKNHT 119
>gi|397904342|ref|ZP_10505259.1| Cytidine deaminase [Caloramator australicus RC3]
gi|343179089|emb|CCC58158.1| Cytidine deaminase [Caloramator australicus RC3]
Length = 133
Score = 115 bits (288), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 57/121 (47%), Positives = 84/121 (69%), Gaps = 7/121 (5%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
+ L ++ ++++NAY PYS +VGAALL ++ IFTGCN+ENASYG T+CAE+TA+ KAI
Sbjct: 4 KELVEIANKSKENAYVPYSNFRVGAALLTEEGKIFTGCNIENASYGGTVCAERTALFKAI 63
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQVGLITI 136
SEG KF+ IA+++ DS PCG CRQV++EF DI V IV +++ + + +
Sbjct: 64 SEGYNKFRAIAITS---DSPNLTFPCGICRQVMSEF---GLDIDV-IVSNNKGEYKVFKL 116
Query: 137 D 137
+
Sbjct: 117 N 117
>gi|300797321|ref|NP_001180039.1| cytidine deaminase [Bos taurus]
gi|296490082|tpg|DAA32195.1| TPA: cytidine deaminase-like [Bos taurus]
gi|440897817|gb|ELR49429.1| Cytidine deaminase [Bos grunniens mutus]
Length = 146
Score = 115 bits (288), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 62/122 (50%), Positives = 83/122 (68%), Gaps = 6/122 (4%)
Query: 11 ALDPIEQNLANLSIQ-ARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEK 69
AL+P LS Q A+ +AYCPYS+ VGAALL D IF+GCN+ENA Y +++CAE+
Sbjct: 9 ALEPQHVQRLLLSCQEAKKSAYCPYSRFPVGAALLTGDGRIFSGCNIENACYPLSVCAER 68
Query: 70 TAISKAISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRS 129
TAI KAISEG +F+ IA+++ L D F+SPCG+CRQV+ EF + D V + K D +
Sbjct: 69 TAIQKAISEGYKEFRAIAIASDLQDD--FISPCGACRQVMREFGT---DWAVYMTKLDGT 123
Query: 130 QV 131
V
Sbjct: 124 YV 125
>gi|296333312|ref|ZP_06875765.1| cytidine deaminase [Bacillus subtilis subsp. spizizenii ATCC 6633]
gi|305675183|ref|YP_003866855.1| cytidine/deoxycytidine deaminase [Bacillus subtilis subsp.
spizizenii str. W23]
gi|350266731|ref|YP_004878038.1| cytidine deaminase [Bacillus subtilis subsp. spizizenii TU-B-10]
gi|296149510|gb|EFG90406.1| cytidine deaminase [Bacillus subtilis subsp. spizizenii ATCC 6633]
gi|305413427|gb|ADM38546.1| cytidine/deoxycytidine deaminase [Bacillus subtilis subsp.
spizizenii str. W23]
gi|349599618|gb|AEP87406.1| cytidine deaminase [Bacillus subtilis subsp. spizizenii TU-B-10]
Length = 136
Score = 115 bits (288), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 59/125 (47%), Positives = 87/125 (69%), Gaps = 8/125 (6%)
Query: 16 EQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKA 75
+Q L +++ARD AY PYSK QVGAALL +D ++ GCN+ENA+Y M CAE+TA+ KA
Sbjct: 3 KQELITEALKARDMAYAPYSKFQVGAALLTKDGKVYRGCNIENAAYSMCNCAERTALFKA 62
Query: 76 ISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSD-RSQVGLI 134
+SEG T+F+ +AV+A P VSPCG+CRQVI+E C V++V ++ + Q+ +
Sbjct: 63 VSEGDTEFQMLAVAADTPGP---VSPCGACRQVISEL----CTKDVIVVLTNLQGQIKEM 115
Query: 135 TIDGM 139
T++ +
Sbjct: 116 TVEEL 120
>gi|55925253|ref|NP_001007390.1| uncharacterized protein LOC492517 [Danio rerio]
gi|55250353|gb|AAH85561.1| Zgc:103586 [Danio rerio]
gi|182891650|gb|AAI64938.1| Zgc:103586 protein [Danio rerio]
Length = 133
Score = 115 bits (288), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 57/106 (53%), Positives = 74/106 (69%), Gaps = 5/106 (4%)
Query: 24 IQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQTKF 83
+QAR+ AYCPYS VGAA+L I TGCNVENASYG+T+CAE+TAI +A++EG +F
Sbjct: 11 LQAREMAYCPYSGFPVGAAILTTGGAIVTGCNVENASYGLTVCAERTAIQRAVAEGYRRF 70
Query: 84 KRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRS 129
IAV+ + DS FV PCG+CRQV+ EF + + V + K D S
Sbjct: 71 TAIAVTCDIKDS--FVGPCGACRQVLMEFGT---EWDVYLTKPDGS 111
>gi|301785469|ref|XP_002928149.1| PREDICTED: LOW QUALITY PROTEIN: cytidine deaminase-like [Ailuropoda
melanoleuca]
Length = 145
Score = 115 bits (287), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 60/122 (49%), Positives = 81/122 (66%), Gaps = 5/122 (4%)
Query: 10 SALDPIEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEK 69
SAL+P L +A+ +AYCPYS VGAA+L +D IF+GCNVEN Y + +CAE+
Sbjct: 8 SALEPELVQRLLLXREAKKSAYCPYSHFPVGAAILTRDGRIFSGCNVENICYPLGVCAER 67
Query: 70 TAISKAISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRS 129
TAI KAISEG +F+ IA+S+ L D F+SPCG+CRQV+ EF + + V + K D +
Sbjct: 68 TAIQKAISEGHREFRAIAISSDLQDD--FISPCGACRQVMREFGT---NWAVYMTKPDGT 122
Query: 130 QV 131
V
Sbjct: 123 YV 124
>gi|392407809|ref|YP_006444417.1| cytidine deaminase [Anaerobaculum mobile DSM 13181]
gi|390620945|gb|AFM22092.1| cytidine deaminase [Anaerobaculum mobile DSM 13181]
Length = 128
Score = 115 bits (287), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 59/116 (50%), Positives = 80/116 (68%), Gaps = 8/116 (6%)
Query: 16 EQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKA 75
EQ L L+ +AR++AY PYS +VGAALL + TI+ GCNVENAS+G+T+CAE+ A+ KA
Sbjct: 5 EQELFALAKEARESAYAPYSDFKVGAALLGESGTIYLGCNVENASFGLTVCAERVALFKA 64
Query: 76 ISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQV 131
+SEG+ FK IA+ A +K V PCG+C QV+AEF D+ +L+ S S V
Sbjct: 65 VSEGERVFKAIAIYA----GSKSVPPCGACLQVMAEFG----DLDILLFDSKGSYV 112
>gi|428280019|ref|YP_005561754.1| cytidine/deoxycytidine deaminase [Bacillus subtilis subsp. natto
BEST195]
gi|291484976|dbj|BAI86051.1| cytidine/deoxycytidine deaminase [Bacillus subtilis subsp. natto
BEST195]
Length = 136
Score = 115 bits (287), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 59/124 (47%), Positives = 86/124 (69%), Gaps = 8/124 (6%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
Q L +++ARD AY PYSK QVGAALL +D ++ GCN+ENA+Y M CAE+TA+ KA+
Sbjct: 4 QELITEALKARDMAYTPYSKFQVGAALLTKDGKVYRGCNIENAAYSMCNCAERTALFKAV 63
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSD-RSQVGLIT 135
SEG T+F+ +AV+A P VSPCG+CRQVI+E C V++V ++ + Q+ +T
Sbjct: 64 SEGDTEFQMLAVAADTPGP---VSPCGACRQVISEL----CTKDVIVVLTNLQGQIKEMT 116
Query: 136 IDGM 139
++ +
Sbjct: 117 VEDL 120
>gi|354477381|ref|XP_003500899.1| PREDICTED: cytidine deaminase-like [Cricetulus griseus]
Length = 147
Score = 115 bits (287), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 59/115 (51%), Positives = 78/115 (67%), Gaps = 5/115 (4%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
Q L S +A+ +AYCPYS+ VGAALL D IF+GCN+ENA Y + +CAE+TAI KAI
Sbjct: 16 QRLLLSSREAKKSAYCPYSRFPVGAALLTGDGRIFSGCNIENACYPLGVCAERTAIQKAI 75
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQV 131
SEG F+ IA+S+ L +F+SPCG+CRQV+ EF + D V + K D + V
Sbjct: 76 SEGYKDFRAIAISSDL--QEEFISPCGACRQVMREFGT---DWAVYMTKPDGTYV 125
>gi|168208718|ref|ZP_02634343.1| cytidine deaminase [Clostridium perfringens B str. ATCC 3626]
gi|168212947|ref|ZP_02638572.1| cytidine deaminase [Clostridium perfringens CPE str. F4969]
gi|170713146|gb|EDT25328.1| cytidine deaminase [Clostridium perfringens B str. ATCC 3626]
gi|170715606|gb|EDT27788.1| cytidine deaminase [Clostridium perfringens CPE str. F4969]
Length = 132
Score = 115 bits (287), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 58/113 (51%), Positives = 78/113 (69%), Gaps = 4/113 (3%)
Query: 15 IEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISK 74
+++ L +++AR+ AYCPYS +VGAA L +D I+TGCNVENAS+G T CAE+TAI K
Sbjct: 1 MKKELIKKALEARELAYCPYSNFKVGAAALFEDGKIYTGCNVENASFGATNCAERTAIFK 60
Query: 75 AISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSD 127
ISEG K + A++ D N + PCG CRQVI EF+ DI++ IVKS+
Sbjct: 61 GISEGARVLKAM---ALVGDLNSYTYPCGICRQVIVEFAEDK-DIKIFIVKSE 109
>gi|389571828|ref|ZP_10161916.1| cytidine deaminase [Bacillus sp. M 2-6]
gi|388428314|gb|EIL86111.1| cytidine deaminase [Bacillus sp. M 2-6]
Length = 132
Score = 115 bits (287), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 57/108 (52%), Positives = 80/108 (74%), Gaps = 5/108 (4%)
Query: 16 EQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKA 75
+Q L + +++ARD AY PYSK +VGAALL D ++ GCN+ENA+YGM CAE+TA+ KA
Sbjct: 3 KQELISEAVKARDFAYVPYSKFKVGAALLSHDGKVYGGCNIENAAYGMCNCAERTALFKA 62
Query: 76 ISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLI 123
SEG T F+ +AV A D+++ VSPCG+CRQVI+E +P D+ V++
Sbjct: 63 YSEGITSFQMLAVVA---DTDRPVSPCGACRQVISELCAP--DMPVIL 105
>gi|16079584|ref|NP_390408.1| cytidine/deoxycytidine deaminase [Bacillus subtilis subsp. subtilis
str. 168]
gi|221310454|ref|ZP_03592301.1| cytidine/deoxycytidine deaminase [Bacillus subtilis subsp. subtilis
str. 168]
gi|221314777|ref|ZP_03596582.1| cytidine/deoxycytidine deaminase [Bacillus subtilis subsp. subtilis
str. NCIB 3610]
gi|221319700|ref|ZP_03600994.1| cytidine/deoxycytidine deaminase [Bacillus subtilis subsp. subtilis
str. JH642]
gi|221323977|ref|ZP_03605271.1| cytidine/deoxycytidine deaminase [Bacillus subtilis subsp. subtilis
str. SMY]
gi|321312013|ref|YP_004204300.1| cytidine deaminase [Bacillus subtilis BSn5]
gi|384176154|ref|YP_005557539.1| cytidine deaminase [Bacillus subtilis subsp. subtilis str. RO-NN-1]
gi|402776793|ref|YP_006630737.1| cytidine/deoxycytidine deaminase [Bacillus subtilis QB928]
gi|418032294|ref|ZP_12670777.1| cytidine/deoxycytidine deaminase [Bacillus subtilis subsp. subtilis
str. SC-8]
gi|449095024|ref|YP_007427515.1| cytidine/deoxycytidine deamina [Bacillus subtilis XF-1]
gi|452915077|ref|ZP_21963703.1| cytidine deaminase [Bacillus subtilis MB73/2]
gi|116041|sp|P19079.1|CDD_BACSU RecName: Full=Cytidine deaminase; Short=CDA; AltName: Full=Cytidine
aminohydrolase
gi|20663960|pdb|1JTK|A Chain A, Crystal Structure Of Cytidine Deaminase From Bacillus
Subtilis In Complex With The Inhibitor
Tetrahydrodeoxyuridine
gi|20663961|pdb|1JTK|B Chain B, Crystal Structure Of Cytidine Deaminase From Bacillus
Subtilis In Complex With The Inhibitor
Tetrahydrodeoxyuridine
gi|606744|gb|AAB59993.1| cytidine deaminase [Bacillus subtilis]
gi|1303825|dbj|BAA12481.1| Cdd [Bacillus subtilis]
gi|2634962|emb|CAB14459.1| cytidine/deoxycytidine deaminase [Bacillus subtilis subsp. subtilis
str. 168]
gi|6018365|emb|CAB57856.1| cytidine deaminase [Bacillus subtilis]
gi|320018287|gb|ADV93273.1| cytidine deaminase [Bacillus subtilis BSn5]
gi|349595378|gb|AEP91565.1| cytidine deaminase [Bacillus subtilis subsp. subtilis str. RO-NN-1]
gi|351471157|gb|EHA31278.1| cytidine/deoxycytidine deaminase [Bacillus subtilis subsp. subtilis
str. SC-8]
gi|402481973|gb|AFQ58482.1| Cytidine/deoxycytidine deaminase [Bacillus subtilis QB928]
gi|407959776|dbj|BAM53016.1| cytidine/deoxycytidine deaminase [Bacillus subtilis BEST7613]
gi|407965351|dbj|BAM58590.1| cytidine/deoxycytidine deaminase [Bacillus subtilis BEST7003]
gi|449028939|gb|AGE64178.1| cytidine/deoxycytidine deamina [Bacillus subtilis XF-1]
gi|452115425|gb|EME05821.1| cytidine deaminase [Bacillus subtilis MB73/2]
gi|227058|prf||1613422B cytidine/deoxycitidine deaminase
Length = 136
Score = 115 bits (287), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 59/124 (47%), Positives = 86/124 (69%), Gaps = 8/124 (6%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
Q L +++ARD AY PYSK QVGAALL +D ++ GCN+ENA+Y M CAE+TA+ KA+
Sbjct: 4 QELITEALKARDMAYAPYSKFQVGAALLTKDGKVYRGCNIENAAYSMCNCAERTALFKAV 63
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSD-RSQVGLIT 135
SEG T+F+ +AV+A P VSPCG+CRQVI+E C V++V ++ + Q+ +T
Sbjct: 64 SEGDTEFQMLAVAADTPGP---VSPCGACRQVISEL----CTKDVIVVLTNLQGQIKEMT 116
Query: 136 IDGM 139
++ +
Sbjct: 117 VEEL 120
>gi|407978477|ref|ZP_11159308.1| cytidine deaminase [Bacillus sp. HYC-10]
gi|407415035|gb|EKF36651.1| cytidine deaminase [Bacillus sp. HYC-10]
Length = 132
Score = 115 bits (287), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 58/108 (53%), Positives = 80/108 (74%), Gaps = 5/108 (4%)
Query: 16 EQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKA 75
+Q L + +I+ARD AY PYSK +VGAALL D ++ GCN+ENA+YGM CAE+TA+ KA
Sbjct: 3 KQELISEAIKARDFAYVPYSKFKVGAALLSNDGKVYGGCNIENAAYGMCNCAERTALFKA 62
Query: 76 ISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLI 123
SEG T F+ +AV A D+++ VSPCG+CRQVI+E +P D+ V++
Sbjct: 63 YSEGITSFQMLAVVA---DTDRPVSPCGACRQVISELCAP--DMPVIL 105
>gi|332522523|ref|ZP_08398775.1| cytidine deaminase [Streptococcus porcinus str. Jelinkova 176]
gi|332313787|gb|EGJ26772.1| cytidine deaminase [Streptococcus porcinus str. Jelinkova 176]
Length = 129
Score = 115 bits (287), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 57/120 (47%), Positives = 80/120 (66%), Gaps = 4/120 (3%)
Query: 15 IEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISK 74
+ L + +I+A AY PYSK VGAALL + +FTGCN+ENAS+G+T CAE+TAI K
Sbjct: 2 VATKLESAAIEASKYAYVPYSKFPVGAALLTSEGKLFTGCNIENASFGLTNCAERTAIFK 61
Query: 75 AISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQVGLI 134
A+SEG +K ++ AI ++ + VSPCG+CRQV+AEF P + LI K R+ + +
Sbjct: 62 AVSEG---YKELSEIAIFGETQEPVSPCGACRQVMAEFFEPTAKV-TLIAKDGRTTLTTV 117
>gi|386759127|ref|YP_006232343.1| cytidine/deoxycytidine deaminase [Bacillus sp. JS]
gi|384932409|gb|AFI29087.1| cytidine/deoxycytidine deaminase [Bacillus sp. JS]
Length = 136
Score = 115 bits (287), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 59/124 (47%), Positives = 86/124 (69%), Gaps = 8/124 (6%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
Q L +++ARD AY PYSK QVGAALL +D ++ GCN+ENA+Y M CAE+TA+ KA+
Sbjct: 4 QELITEALKARDMAYAPYSKFQVGAALLTKDGKVYRGCNIENAAYSMCNCAERTALFKAV 63
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSD-RSQVGLIT 135
SEG T+F+ +AV+A P VSPCG+CRQVI+E C V++V ++ + Q+ +T
Sbjct: 64 SEGDTEFQMLAVAADTPGP---VSPCGACRQVISEL----CTKDVVVVLTNLQGQIKEMT 116
Query: 136 IDGM 139
++ +
Sbjct: 117 VEEL 120
>gi|422821369|ref|ZP_16869562.1| cytidine deaminase [Streptococcus sanguinis SK353]
gi|422851750|ref|ZP_16898420.1| cytidine deaminase [Streptococcus sanguinis SK150]
gi|324990797|gb|EGC22732.1| cytidine deaminase [Streptococcus sanguinis SK353]
gi|325694365|gb|EGD36277.1| cytidine deaminase [Streptococcus sanguinis SK150]
Length = 129
Score = 114 bits (286), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 56/114 (49%), Positives = 78/114 (68%), Gaps = 5/114 (4%)
Query: 18 NLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAIS 77
L +L++QA NAY PYS +GA L+ +D +FTG NVENAS+G+T C E+TAI KA+S
Sbjct: 5 ELIDLAVQASKNAYVPYSHFPIGAVLVAKDGRVFTGVNVENASFGLTNCGERTAIFKAVS 64
Query: 78 EGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQV 131
EG F+ + V ++ K +SPCG+CRQV+AEF S D++V +V D+S V
Sbjct: 65 EGALDFEELIVYG---ETEKPISPCGACRQVMAEFFSE--DLKVTLVAKDKSTV 113
>gi|363899079|ref|ZP_09325590.1| cytidine deaminase [Oribacterium sp. ACB1]
gi|395209523|ref|ZP_10398617.1| cytidine deaminase [Oribacterium sp. ACB8]
gi|361959409|gb|EHL12696.1| cytidine deaminase [Oribacterium sp. ACB1]
gi|394705154|gb|EJF12683.1| cytidine deaminase [Oribacterium sp. ACB8]
Length = 141
Score = 114 bits (286), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 57/113 (50%), Positives = 77/113 (68%), Gaps = 3/113 (2%)
Query: 16 EQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKA 75
E++L + +AR+ AY PYS +VGAAL + IF GCN+ENASYG T CAE+TA KA
Sbjct: 7 ERHLIEKAFEARERAYVPYSHFRVGAALESETGEIFLGCNIENASYGATNCAERTAFFKA 66
Query: 76 ISEGQTKFKRIAVSA--ILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKS 126
+SEG KF+RIA+ I + ++ +PCG CRQV+AEF+ D QV++ KS
Sbjct: 67 VSEGCKKFRRIAIVGGLIGKEETEYCAPCGICRQVMAEFTDIH-DFQVILAKS 118
>gi|222153100|ref|YP_002562277.1| cytidine deaminase [Streptococcus uberis 0140J]
gi|222113913|emb|CAR42116.1| cytidine deaminase [Streptococcus uberis 0140J]
Length = 128
Score = 114 bits (286), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 56/113 (49%), Positives = 80/113 (70%), Gaps = 4/113 (3%)
Query: 18 NLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAIS 77
NL +L+I+A NAY PYS +GAA+ +D IFTGCN+ENAS+G+T C E+TAI KA+S
Sbjct: 4 NLVSLAIKASKNAYVPYSHFPIGAAVRTKDGHIFTGCNIENASFGLTNCGERTAIFKAVS 63
Query: 78 EGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQ 130
+G +F I AI ++ + VSPCG+CRQV+AEF P+ + +LI K + ++
Sbjct: 64 QGYREFSEI---AIYGETLQPVSPCGACRQVMAEFFEPSAKV-ILIAKDNSTK 112
>gi|317418859|emb|CBN80897.1| Cytidine deaminase [Dicentrarchus labrax]
Length = 165
Score = 114 bits (286), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 55/103 (53%), Positives = 73/103 (70%), Gaps = 3/103 (2%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
+ L S +A+ AYCPYSK +VGAALL D+ +FTGCNVENA Y + +CAE+ AIS+A+
Sbjct: 27 KKLIQQSQEAKTQAYCPYSKFRVGAALLTPDNCVFTGCNVENACYNLGVCAERNAISRAV 86
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDI 119
SEG FK IA+++ L D +F+SPCG CRQ + EF P D+
Sbjct: 87 SEGHRSFKAIAIASDLDD--QFISPCGGCRQFMREF-GPNWDV 126
>gi|422876577|ref|ZP_16923047.1| cytidine deaminase [Streptococcus sanguinis SK1056]
gi|422878985|ref|ZP_16925451.1| cytidine deaminase [Streptococcus sanguinis SK1059]
gi|422928831|ref|ZP_16961773.1| cytidine deaminase [Streptococcus sanguinis ATCC 29667]
gi|422931805|ref|ZP_16964736.1| cytidine deaminase [Streptococcus sanguinis SK340]
gi|332361385|gb|EGJ39189.1| cytidine deaminase [Streptococcus sanguinis SK1056]
gi|332366607|gb|EGJ44351.1| cytidine deaminase [Streptococcus sanguinis SK1059]
gi|339615989|gb|EGQ20651.1| cytidine deaminase [Streptococcus sanguinis ATCC 29667]
gi|339619238|gb|EGQ23819.1| cytidine deaminase [Streptococcus sanguinis SK340]
Length = 129
Score = 114 bits (286), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 57/114 (50%), Positives = 78/114 (68%), Gaps = 5/114 (4%)
Query: 18 NLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAIS 77
L +L++QA NAY PYS +GA L+ +D IFTG NVENAS+G+T C E+TAI KA+S
Sbjct: 5 ELIDLAVQASKNAYVPYSHFPIGAVLVAKDGRIFTGVNVENASFGLTNCGERTAIFKAVS 64
Query: 78 EGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQV 131
EG F+ + V ++ K +SPCG+CRQV+AEF A D++V +V D+S V
Sbjct: 65 EGALDFEELIVYG---ETEKPISPCGACRQVMAEFF--AEDLKVTLVAKDKSTV 113
>gi|49259414|pdb|1UX0|A Chain A, Bacillus Subtilis Cytidine Deaminase With An Arg56 - Gln
Substitution
gi|49259415|pdb|1UX0|B Chain B, Bacillus Subtilis Cytidine Deaminase With An Arg56 - Gln
Substitution
Length = 136
Score = 114 bits (286), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 59/124 (47%), Positives = 86/124 (69%), Gaps = 8/124 (6%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
Q L +++ARD AY PYSK QVGAALL +D ++ GCN+ENA+Y M CAE+TA+ KA+
Sbjct: 4 QELITEALKARDMAYAPYSKFQVGAALLTKDGKVYRGCNIENAAYSMCNCAEQTALFKAV 63
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSD-RSQVGLIT 135
SEG T+F+ +AV+A P VSPCG+CRQVI+E C V++V ++ + Q+ +T
Sbjct: 64 SEGDTEFQMLAVAADTPGP---VSPCGACRQVISEL----CTKDVIVVLTNLQGQIKEMT 116
Query: 136 IDGM 139
++ +
Sbjct: 117 VEEL 120
>gi|110800920|ref|YP_696696.1| cytidine deaminase [Clostridium perfringens ATCC 13124]
gi|168204745|ref|ZP_02630750.1| cytidine deaminase [Clostridium perfringens E str. JGS1987]
gi|168215643|ref|ZP_02641268.1| cytidine deaminase [Clostridium perfringens NCTC 8239]
gi|182624380|ref|ZP_02952164.1| cytidine deaminase [Clostridium perfringens D str. JGS1721]
gi|422346682|ref|ZP_16427596.1| cytidine deaminase [Clostridium perfringens WAL-14572]
gi|422874932|ref|ZP_16921417.1| cytidine deaminase [Clostridium perfringens F262]
gi|110675567|gb|ABG84554.1| cytidine deaminase [Clostridium perfringens ATCC 13124]
gi|170663606|gb|EDT16289.1| cytidine deaminase [Clostridium perfringens E str. JGS1987]
gi|177910383|gb|EDT72760.1| cytidine deaminase [Clostridium perfringens D str. JGS1721]
gi|182381986|gb|EDT79465.1| cytidine deaminase [Clostridium perfringens NCTC 8239]
gi|373226227|gb|EHP48554.1| cytidine deaminase [Clostridium perfringens WAL-14572]
gi|380304127|gb|EIA16419.1| cytidine deaminase [Clostridium perfringens F262]
Length = 132
Score = 114 bits (286), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 57/113 (50%), Positives = 78/113 (69%), Gaps = 4/113 (3%)
Query: 15 IEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISK 74
+++ L +++AR+ AYCPYS +VGAA L +D I+TGCNVENAS+G T CAE+TAI K
Sbjct: 1 MKKELIKKALEARELAYCPYSNFKVGAAALFEDGKIYTGCNVENASFGATNCAERTAIFK 60
Query: 75 AISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSD 127
+SEG K + A++ D N + PCG CRQVI EF+ DI++ IVKS+
Sbjct: 61 GVSEGARVLKAM---ALVGDLNSYTYPCGICRQVIVEFAEDK-DIKIFIVKSE 109
>gi|422860275|ref|ZP_16906919.1| cytidine deaminase [Streptococcus sanguinis SK330]
gi|327469471|gb|EGF14940.1| cytidine deaminase [Streptococcus sanguinis SK330]
Length = 129
Score = 114 bits (286), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 56/114 (49%), Positives = 78/114 (68%), Gaps = 5/114 (4%)
Query: 18 NLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAIS 77
L +L++QA NAY PYS +GA L+ +D +FTG NVENAS+G+T C E+TAI KA+S
Sbjct: 5 ELIDLAVQASKNAYVPYSHFPIGAVLVAKDGRVFTGVNVENASFGLTNCGERTAIFKAVS 64
Query: 78 EGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQV 131
EG F+ + V ++ K +SPCG+CRQV+AEF S D++V +V D+S V
Sbjct: 65 EGVLDFEELIVYG---ETEKPISPCGACRQVMAEFFSE--DLKVTLVAKDKSTV 113
>gi|348571239|ref|XP_003471403.1| PREDICTED: cytidine deaminase-like [Cavia porcellus]
Length = 145
Score = 114 bits (286), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 63/122 (51%), Positives = 81/122 (66%), Gaps = 6/122 (4%)
Query: 11 ALDPIE-QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEK 69
AL+P Q L S +A+ +AYCPYS VGAALL + IF+GCNVENA Y + CAE+
Sbjct: 9 ALEPEHVQRLLLSSQEAKKSAYCPYSHFPVGAALLTGNGLIFSGCNVENACYPLGTCAER 68
Query: 70 TAISKAISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRS 129
TAI KAISEG F+ IA+S+ L D F+SPCG+CRQV+ EF + D V + K+D +
Sbjct: 69 TAIQKAISEGHKDFRAIAISSDLQDD--FISPCGACRQVMREFGT---DWAVYMTKADGT 123
Query: 130 QV 131
V
Sbjct: 124 YV 125
>gi|147677229|ref|YP_001211444.1| cytidine deaminase [Pelotomaculum thermopropionicum SI]
gi|146273326|dbj|BAF59075.1| cytidine deaminase [Pelotomaculum thermopropionicum SI]
Length = 156
Score = 114 bits (286), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 56/119 (47%), Positives = 84/119 (70%), Gaps = 11/119 (9%)
Query: 6 IMEFSALDPIEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTI 65
+M+F P+E+ L N ++ AR+ AY PYSK +VGAA+L ++ +TGCN+ENASYG+T
Sbjct: 3 LMDF----PVEK-LINAAMAARERAYAPYSKFRVGAAILTREGRYYTGCNIENASYGLTC 57
Query: 66 CAEKTAISKAISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIV 124
CAE+ A+ KA+S G+ F+ IAV+A S+++ +PCG+CRQ +AEF DI+V +
Sbjct: 58 CAERVALFKAVSNGERDFEAIAVTA---GSDEYCAPCGACRQALAEFGE---DIKVFMA 110
>gi|414154881|ref|ZP_11411198.1| Cytidine deaminase [Desulfotomaculum hydrothermale Lam5 = DSM
18033]
gi|411453712|emb|CCO09102.1| Cytidine deaminase [Desulfotomaculum hydrothermale Lam5 = DSM
18033]
Length = 134
Score = 114 bits (285), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 56/96 (58%), Positives = 69/96 (71%), Gaps = 3/96 (3%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
+ L + +AR AY PYSK +VGAALL ++ IFTGCNVENASYG+T CAE+TA+ KA+
Sbjct: 6 ETLIERAKEARQRAYAPYSKFKVGAALLTKEGRIFTGCNVENASYGLTCCAERTALLKAV 65
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEF 112
SEG F I AI+ D F SPCG+CRQV+AEF
Sbjct: 66 SEGYQNFTDI---AIVADVATFCSPCGACRQVLAEF 98
>gi|194017659|ref|ZP_03056269.1| cytidine deaminase [Bacillus pumilus ATCC 7061]
gi|194010559|gb|EDW20131.1| cytidine deaminase [Bacillus pumilus ATCC 7061]
Length = 132
Score = 114 bits (285), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 57/108 (52%), Positives = 80/108 (74%), Gaps = 5/108 (4%)
Query: 16 EQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKA 75
+Q L + +++ARD AY PYSK +VGAALL D ++ GCN+ENA+YGM CAE+TA+ KA
Sbjct: 3 KQELISEAVKARDFAYVPYSKFKVGAALLSNDGKVYGGCNIENAAYGMCNCAERTALFKA 62
Query: 76 ISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLI 123
SEG T F+ +AV A D+++ VSPCG+CRQVI+E +P D+ V++
Sbjct: 63 YSEGITSFQMLAVVA---DTDRPVSPCGACRQVISELCAP--DMPVIL 105
>gi|58037289|ref|NP_082452.1| cytidine deaminase [Mus musculus]
gi|62296704|sp|P56389.2|CDD_MOUSE RecName: Full=Cytidine deaminase; AltName: Full=Cytidine
aminohydrolase
gi|99031657|pdb|1ZAB|A Chain A, Crystal Structure Of Mouse Cytidine Deaminase Complexed
With 3-Deazauridine
gi|99031658|pdb|1ZAB|B Chain B, Crystal Structure Of Mouse Cytidine Deaminase Complexed
With 3-Deazauridine
gi|99031659|pdb|1ZAB|C Chain C, Crystal Structure Of Mouse Cytidine Deaminase Complexed
With 3-Deazauridine
gi|99031660|pdb|1ZAB|D Chain D, Crystal Structure Of Mouse Cytidine Deaminase Complexed
With 3-Deazauridine
gi|112490584|pdb|2FR5|A Chain A, Crystal Structure Of Mouse Cytidine Deaminase Complexed
With Tetrahydrouridine
gi|112490585|pdb|2FR5|B Chain B, Crystal Structure Of Mouse Cytidine Deaminase Complexed
With Tetrahydrouridine
gi|112490586|pdb|2FR5|C Chain C, Crystal Structure Of Mouse Cytidine Deaminase Complexed
With Tetrahydrouridine
gi|112490587|pdb|2FR5|D Chain D, Crystal Structure Of Mouse Cytidine Deaminase Complexed
With Tetrahydrouridine
gi|112490590|pdb|2FR6|A Chain A, Crystal Structure Of Mouse Cytidine Deaminase Complexed
With Cytidine
gi|112490591|pdb|2FR6|B Chain B, Crystal Structure Of Mouse Cytidine Deaminase Complexed
With Cytidine
gi|112490592|pdb|2FR6|C Chain C, Crystal Structure Of Mouse Cytidine Deaminase Complexed
With Cytidine
gi|112490593|pdb|2FR6|D Chain D, Crystal Structure Of Mouse Cytidine Deaminase Complexed
With Cytidine
gi|12843205|dbj|BAB25898.1| unnamed protein product [Mus musculus]
gi|29747846|gb|AAH50114.1| Cytidine deaminase [Mus musculus]
gi|148681316|gb|EDL13263.1| cytidine deaminase [Mus musculus]
Length = 146
Score = 114 bits (285), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 58/111 (52%), Positives = 76/111 (68%), Gaps = 5/111 (4%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
Q L S +A+ +AYCPYS+ VGAALL D IF+GCN+ENA Y + +CAE+TAI KAI
Sbjct: 16 QRLLLSSREAKKSAYCPYSRFPVGAALLTGDGRIFSGCNIENACYPLGVCAERTAIQKAI 75
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSD 127
SEG F+ IA+S+ L +F+SPCG+CRQV+ EF + D V + K D
Sbjct: 76 SEGYKDFRAIAISSDL--QEEFISPCGACRQVMREFGT---DWAVYMTKPD 121
>gi|57044256|ref|XP_544519.1| PREDICTED: cytidine deaminase [Canis lupus familiaris]
Length = 146
Score = 114 bits (285), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 61/123 (49%), Positives = 82/123 (66%), Gaps = 6/123 (4%)
Query: 10 SALDP-IEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAE 68
SAL+P + Q L +A+ +AYCPYS VGAA+L QD IF+GCN+EN Y + +CAE
Sbjct: 8 SALEPELVQRLLLSCQEAKKSAYCPYSHFPVGAAILTQDGRIFSGCNIENVCYPLGVCAE 67
Query: 69 KTAISKAISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDR 128
+TAI KAISEG +F+ IA+S+ L D F+SPCG+CRQ + EF S + V + K D
Sbjct: 68 RTAIQKAISEGHREFRAIAISSDLQDD--FISPCGACRQFMREFGS---NWVVYMTKPDG 122
Query: 129 SQV 131
+ V
Sbjct: 123 TYV 125
>gi|225715014|gb|ACO13353.1| Cytidine deaminase [Esox lucius]
Length = 192
Score = 114 bits (285), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 50/87 (57%), Positives = 68/87 (78%), Gaps = 2/87 (2%)
Query: 26 ARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQTKFKR 85
A++ AYCPYSK +VGAALL D T+FTGCNVENAS+ + +CAE+TA+ KA+S+G FK
Sbjct: 41 AKEFAYCPYSKFRVGAALLAHDGTVFTGCNVENASHNLGLCAERTAVVKAVSQGYQSFKA 100
Query: 86 IAVSAILPDSNKFVSPCGSCRQVIAEF 112
+A+++ L D +F+SPCG CRQ + EF
Sbjct: 101 VAIASDLED--QFISPCGGCRQFLREF 125
>gi|323351700|ref|ZP_08087354.1| cytidine deaminase [Streptococcus sanguinis VMC66]
gi|422882159|ref|ZP_16928615.1| cytidine deaminase [Streptococcus sanguinis SK355]
gi|322122186|gb|EFX93912.1| cytidine deaminase [Streptococcus sanguinis VMC66]
gi|332360929|gb|EGJ38734.1| cytidine deaminase [Streptococcus sanguinis SK355]
Length = 129
Score = 114 bits (285), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 57/114 (50%), Positives = 78/114 (68%), Gaps = 5/114 (4%)
Query: 18 NLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAIS 77
L +L++QA NAY PYS +GA L+ +D IFTG NVENAS+G+T C E+TAI KA+S
Sbjct: 5 ELIDLAVQASKNAYVPYSHFPIGAVLVAKDGRIFTGVNVENASFGLTNCGERTAIFKAVS 64
Query: 78 EGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQV 131
EG F+ + V ++ K +SPCG+CRQV+AEF A D++V +V D+S V
Sbjct: 65 EGVLDFEELIVYG---ETEKPISPCGACRQVMAEFF--AEDLKVTLVAKDKSTV 113
>gi|125717869|ref|YP_001035002.1| cytidine deaminase [Streptococcus sanguinis SK36]
gi|401683150|ref|ZP_10815039.1| cytidine deaminase [Streptococcus sp. AS14]
gi|422848807|ref|ZP_16895483.1| cytidine deaminase [Streptococcus sanguinis SK115]
gi|422884321|ref|ZP_16930770.1| cytidine deaminase [Streptococcus sanguinis SK49]
gi|125497786|gb|ABN44452.1| Cytidine deaminase, putative [Streptococcus sanguinis SK36]
gi|325689828|gb|EGD31832.1| cytidine deaminase [Streptococcus sanguinis SK115]
gi|332360336|gb|EGJ38148.1| cytidine deaminase [Streptococcus sanguinis SK49]
gi|400183832|gb|EJO18083.1| cytidine deaminase [Streptococcus sp. AS14]
Length = 129
Score = 114 bits (285), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 56/114 (49%), Positives = 78/114 (68%), Gaps = 5/114 (4%)
Query: 18 NLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAIS 77
L +L++QA NAY PYS +GA L+ +D +FTG NVENAS+G+T C E+TAI KA+S
Sbjct: 5 ELIDLAVQASKNAYVPYSHFPIGAVLVAKDGRVFTGVNVENASFGLTNCGERTAIFKAVS 64
Query: 78 EGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQV 131
EG F+ + V ++ K +SPCG+CRQV+AEF A D++V +V D+S V
Sbjct: 65 EGALDFEELIVYG---ETEKPISPCGACRQVMAEFF--AEDLKVTLVAKDKSTV 113
>gi|422823711|ref|ZP_16871899.1| cytidine deaminase [Streptococcus sanguinis SK405]
gi|422826217|ref|ZP_16874396.1| cytidine deaminase [Streptococcus sanguinis SK678]
gi|422854137|ref|ZP_16900801.1| cytidine deaminase [Streptococcus sanguinis SK160]
gi|422855645|ref|ZP_16902303.1| cytidine deaminase [Streptococcus sanguinis SK1]
gi|422865620|ref|ZP_16912245.1| cytidine deaminase [Streptococcus sanguinis SK1058]
gi|324993038|gb|EGC24958.1| cytidine deaminase [Streptococcus sanguinis SK405]
gi|324995653|gb|EGC27565.1| cytidine deaminase [Streptococcus sanguinis SK678]
gi|325696651|gb|EGD38540.1| cytidine deaminase [Streptococcus sanguinis SK160]
gi|327461306|gb|EGF07637.1| cytidine deaminase [Streptococcus sanguinis SK1]
gi|327489165|gb|EGF20958.1| cytidine deaminase [Streptococcus sanguinis SK1058]
Length = 129
Score = 114 bits (285), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 56/114 (49%), Positives = 78/114 (68%), Gaps = 5/114 (4%)
Query: 18 NLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAIS 77
L +L++QA NAY PYS +GA L+ +D +FTG NVENAS+G+T C E+TAI KA+S
Sbjct: 5 ELIDLAVQASKNAYVPYSHFPIGAVLVAKDGQVFTGVNVENASFGLTNCGERTAIFKAVS 64
Query: 78 EGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQV 131
EG F+ + V ++ K +SPCG+CRQV+AEF A D++V +V D+S V
Sbjct: 65 EGALDFEELIVYG---ETEKPISPCGACRQVMAEFF--AEDLKVTLVAKDKSTV 113
>gi|196007680|ref|XP_002113706.1| hypothetical protein TRIADDRAFT_27098 [Trichoplax adhaerens]
gi|190584110|gb|EDV24180.1| hypothetical protein TRIADDRAFT_27098 [Trichoplax adhaerens]
Length = 181
Score = 114 bits (284), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 55/92 (59%), Positives = 72/92 (78%), Gaps = 3/92 (3%)
Query: 26 ARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQTKFKR 85
A++ AY PYSK +VG+ALL ++ I+ GCNVENA+YG ICAE+TAI KA+SEGQ KF+
Sbjct: 36 AKEFAYAPYSKFRVGSALLAENGKIYLGCNVENAAYGACICAERTAIVKAVSEGQKKFRS 95
Query: 86 IAVSAILPDSNKFVSPCGSCRQVIAEFSSPAC 117
IA++A + D +F PCG+CRQV+AEF SP C
Sbjct: 96 IAITADIQD--QFCLPCGTCRQVLAEF-SPDC 124
>gi|18310998|ref|NP_562932.1| cytidine deaminase [Clostridium perfringens str. 13]
gi|110802418|ref|YP_699297.1| cytidine deaminase [Clostridium perfringens SM101]
gi|18145680|dbj|BAB81722.1| cytidine deaminase [Clostridium perfringens str. 13]
gi|110682919|gb|ABG86289.1| cytidine deaminase [Clostridium perfringens SM101]
Length = 132
Score = 114 bits (284), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 56/113 (49%), Positives = 78/113 (69%), Gaps = 4/113 (3%)
Query: 15 IEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISK 74
+++ L +++AR+ AYCPYS +VGAA L +D I+TGCN+ENAS+G T CAE+TAI K
Sbjct: 1 MKKELIKKALEARELAYCPYSNFKVGAAALFEDGKIYTGCNIENASFGATNCAERTAIFK 60
Query: 75 AISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSD 127
+SEG K + A++ D N + PCG CRQVI EF+ DI++ IVKS+
Sbjct: 61 GVSEGARVLKAM---ALVGDLNSYTYPCGICRQVIVEFAEDK-DIKIFIVKSE 109
>gi|28211642|ref|NP_782586.1| cytidine deaminase [Clostridium tetani E88]
gi|28204084|gb|AAO36523.1| cytidine deaminase [Clostridium tetani E88]
Length = 141
Score = 114 bits (284), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 55/96 (57%), Positives = 71/96 (73%), Gaps = 3/96 (3%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
+ L +++AR+ AY PYS +VGAA+L +D+ I+ GCN+ENAS+G T CAE+TAI KAI
Sbjct: 13 KELIKKAMEARELAYVPYSNFKVGAAILTEDNNIYNGCNIENASFGATNCAERTAIFKAI 72
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEF 112
SEG+TK K I AIL ++F PCG CRQVIAEF
Sbjct: 73 SEGKTKIKAI---AILGRKDEFTYPCGICRQVIAEF 105
>gi|443713097|gb|ELU06103.1| hypothetical protein CAPTEDRAFT_20269 [Capitella teleta]
Length = 158
Score = 114 bits (284), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 58/117 (49%), Positives = 79/117 (67%), Gaps = 5/117 (4%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
+ L + S++ + AYCPYSK VGAA+L D I+TGCNVE A Y +T+CAE+ AI+KA+
Sbjct: 15 EELIDESVKVKRRAYCPYSKFPVGAAVLGCDGRIYTGCNVECAVYPLTMCAERNAITKAV 74
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQVGL 133
SEG KF I +++ L N ++PCG+CRQ+IAEF D +V + KSDRS L
Sbjct: 75 SEGCKKFTAIVITSDL--KNSIITPCGACRQIIAEF---GMDAEVYMTKSDRSYTKL 126
>gi|195114348|ref|XP_002001729.1| GI17009 [Drosophila mojavensis]
gi|193912304|gb|EDW11171.1| GI17009 [Drosophila mojavensis]
Length = 159
Score = 114 bits (284), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 54/121 (44%), Positives = 77/121 (63%), Gaps = 2/121 (1%)
Query: 5 DIMEFSALDPIEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMT 64
++ E +LD Q L + +AR+ AYCPYS VGAA+ D +I+TGCN+EN +Y +
Sbjct: 14 NVREHDSLDASIQELIRAAAEARNYAYCPYSNFAVGAAIRTSDGSIYTGCNIENGAYAAS 73
Query: 65 ICAEKTAISKAISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIV 124
ICAE+TA KA+SEG+ +F +A + + N F +PCG CRQ +AEF+S DI +
Sbjct: 74 ICAERTAAVKALSEGKRQF--VACAVVAQQDNGFTTPCGVCRQFLAEFASNGRDIALYAA 131
Query: 125 K 125
K
Sbjct: 132 K 132
>gi|226443164|ref|NP_001140065.1| Cytidine deaminase [Salmo salar]
gi|221221622|gb|ACM09472.1| Cytidine deaminase [Salmo salar]
gi|223646524|gb|ACN10020.1| Cytidine deaminase [Salmo salar]
gi|223672371|gb|ACN12367.1| Cytidine deaminase [Salmo salar]
Length = 166
Score = 114 bits (284), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 56/113 (49%), Positives = 77/113 (68%), Gaps = 5/113 (4%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
+ L + S++A++ AYCPYS +VGAALL DD +FTGCNVENA + +CAE+ AI+KA+
Sbjct: 28 EGLIHQSLEAKEFAYCPYSNFRVGAALLAHDDRVFTGCNVENACNNLGVCAERNAIAKAV 87
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRS 129
SEG FK IA+++ L D +F+SPCG CRQ + EF + V + K D S
Sbjct: 88 SEGCRSFKAIAIASDLHD--QFISPCGGCRQFMREFGA---SWDVYLTKPDGS 135
>gi|422858605|ref|ZP_16905255.1| cytidine deaminase [Streptococcus sanguinis SK1057]
gi|422862736|ref|ZP_16909368.1| cytidine deaminase [Streptococcus sanguinis SK408]
gi|422871048|ref|ZP_16917541.1| cytidine deaminase [Streptococcus sanguinis SK1087]
gi|327459748|gb|EGF06088.1| cytidine deaminase [Streptococcus sanguinis SK1057]
gi|327473944|gb|EGF19357.1| cytidine deaminase [Streptococcus sanguinis SK408]
gi|328946004|gb|EGG40150.1| cytidine deaminase [Streptococcus sanguinis SK1087]
Length = 129
Score = 114 bits (284), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 55/111 (49%), Positives = 77/111 (69%), Gaps = 5/111 (4%)
Query: 21 NLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQ 80
+L++QA NAY PYS +GA L+ +D +FTG NVENAS+G+T C E+TAI KA+SEG
Sbjct: 8 DLAVQASKNAYVPYSHFPIGAVLVAKDGRVFTGVNVENASFGLTNCGERTAIFKAVSEGA 67
Query: 81 TKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQV 131
F+ + V ++ K +SPCG+CRQV+AEF S D++V +V D+S V
Sbjct: 68 LDFEELIVYG---ETEKPISPCGACRQVMAEFFSE--DLKVTLVAKDKSTV 113
>gi|49259412|pdb|1UWZ|A Chain A, Bacillus Subtilis Cytidine Deaminase With An Arg56 - Ala
Substitution
gi|49259413|pdb|1UWZ|B Chain B, Bacillus Subtilis Cytidine Deaminase With An Arg56 - Ala
Substitution
Length = 136
Score = 114 bits (284), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 59/124 (47%), Positives = 85/124 (68%), Gaps = 8/124 (6%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
Q L +++ARD AY PYSK QVGAALL +D ++ GCN+ENA+Y M CAE TA+ KA+
Sbjct: 4 QELITEALKARDMAYAPYSKFQVGAALLTKDGKVYRGCNIENAAYSMCNCAEATALFKAV 63
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSD-RSQVGLIT 135
SEG T+F+ +AV+A P VSPCG+CRQVI+E C V++V ++ + Q+ +T
Sbjct: 64 SEGDTEFQMLAVAADTPGP---VSPCGACRQVISEL----CTKDVIVVLTNLQGQIKEMT 116
Query: 136 IDGM 139
++ +
Sbjct: 117 VEEL 120
>gi|430758712|ref|YP_007208929.1| cytidine deaminase [Bacillus subtilis subsp. subtilis str. BSP1]
gi|430023232|gb|AGA23838.1| Cytidine deaminase [Bacillus subtilis subsp. subtilis str. BSP1]
Length = 131
Score = 114 bits (284), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 57/112 (50%), Positives = 79/112 (70%), Gaps = 7/112 (6%)
Query: 16 EQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKA 75
Q L +++ARD AY PYSK QVGAALL +D ++ GCN+ENA+Y M CAE+TA+ KA
Sbjct: 3 RQELITEALKARDMAYAPYSKFQVGAALLTKDGKVYRGCNIENAAYSMCNCAERTALFKA 62
Query: 76 ISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSD 127
+SEG+T+F+ +AV+A P VSPCG+CRQVI+E C V++V ++
Sbjct: 63 VSEGETEFQMLAVAADTPGP---VSPCGACRQVISEL----CTKDVIVVLTN 107
>gi|15894822|ref|NP_348171.1| cytidine deaminase [Clostridium acetobutylicum ATCC 824]
gi|337736764|ref|YP_004636211.1| cytidine deaminase [Clostridium acetobutylicum DSM 1731]
gi|384458271|ref|YP_005670691.1| cytidine deaminase [Clostridium acetobutylicum EA 2018]
gi|15024494|gb|AAK79511.1|AE007664_8 Cytidine deaminase, cdd [Clostridium acetobutylicum ATCC 824]
gi|325508960|gb|ADZ20596.1| cytidine deaminase [Clostridium acetobutylicum EA 2018]
gi|336292569|gb|AEI33703.1| cytidine deaminase [Clostridium acetobutylicum DSM 1731]
Length = 132
Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 55/108 (50%), Positives = 76/108 (70%), Gaps = 5/108 (4%)
Query: 19 LANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISE 78
L +++AR AY PYSK +VGAA++ + I+TGCN+ENASYG T CAE+TAI KA+SE
Sbjct: 6 LVYKALEARKKAYAPYSKFKVGAAVIADNGEIYTGCNIENASYGATNCAERTAIFKAVSE 65
Query: 79 GQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKS 126
G TK IA+ + D + PCG CRQVIAEF+S D+++++ K+
Sbjct: 66 GHTKLNAIAIVGVEKD---YTYPCGICRQVIAEFASE--DMKIVLGKN 108
>gi|422846531|ref|ZP_16893214.1| cytidine deaminase [Streptococcus sanguinis SK72]
gi|325687974|gb|EGD29994.1| cytidine deaminase [Streptococcus sanguinis SK72]
Length = 129
Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 55/114 (48%), Positives = 78/114 (68%), Gaps = 5/114 (4%)
Query: 18 NLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAIS 77
L +L++QA NAY PYS +G+ L+ +D +FTG NVENAS+G+T C E+TAI KA+S
Sbjct: 5 ELIDLAVQASKNAYVPYSHFPIGSVLVAKDGRVFTGVNVENASFGLTNCGERTAIFKAVS 64
Query: 78 EGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQV 131
EG F+ + V ++ K +SPCG+CRQV+AEF S D++V +V D+S V
Sbjct: 65 EGALDFEELIVYG---ETEKPISPCGACRQVMAEFFSE--DLKVTLVAKDKSTV 113
>gi|403287459|ref|XP_003934962.1| PREDICTED: cytidine deaminase [Saimiri boliviensis boliviensis]
gi|403287461|ref|XP_003934963.1| PREDICTED: cytidine deaminase [Saimiri boliviensis boliviensis]
Length = 146
Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 59/115 (51%), Positives = 77/115 (66%), Gaps = 5/115 (4%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
Q L S +A+ +AYCPYS VGAALL QD IF GCN+ENA Y + ICAE+TAI KAI
Sbjct: 16 QRLLVCSQEAKKSAYCPYSHFPVGAALLTQDGRIFQGCNIENACYPLGICAERTAIQKAI 75
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQV 131
SEG F+ IA+++ + D F+SPCG+CRQV+ EF + + V + K D + V
Sbjct: 76 SEGYKDFRAIAIASDMQDD--FISPCGACRQVMREFGT---NWAVYMTKPDGTYV 125
>gi|223646670|gb|ACN10093.1| Cytidine deaminase [Salmo salar]
gi|223672519|gb|ACN12441.1| Cytidine deaminase [Salmo salar]
Length = 166
Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 52/98 (53%), Positives = 72/98 (73%), Gaps = 2/98 (2%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
+ L + S++A++ AYCPYS +VGAALL DD +FTGCNVENA + +CAE+ AI+KA+
Sbjct: 28 EGLIHQSLEAKEFAYCPYSNFRVGAALLAHDDRVFTGCNVENACNNLGVCAERNAIAKAV 87
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSS 114
SEG FK IA+++ L D +F+SPCG CRQ + EF +
Sbjct: 88 SEGCRSFKAIAIASDLHD--QFISPCGGCRQFMREFGA 123
>gi|340354657|ref|ZP_08677359.1| cytidine deaminase [Sporosarcina newyorkensis 2681]
gi|339623180|gb|EGQ27685.1| cytidine deaminase [Sporosarcina newyorkensis 2681]
Length = 136
Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 57/111 (51%), Positives = 74/111 (66%), Gaps = 3/111 (2%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
+ L N + A AY PYSK VGAAL +D TIF GCN+EN++YG+T CAE+TAI KAI
Sbjct: 4 EQLKNEAESAMKTAYVPYSKFPVGAALETEDGTIFRGCNIENSAYGLTNCAERTAIFKAI 63
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSD 127
SEG FK + V + D+ ++PCGSCRQVIAEF +P + + +K D
Sbjct: 64 SEGVKSFKSLTV---IGDTEGPIAPCGSCRQVIAEFCAPGMPVYLTNLKGD 111
>gi|291399364|ref|XP_002716092.1| PREDICTED: cytidine deaminase-like [Oryctolagus cuniculus]
Length = 119
Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 58/105 (55%), Positives = 76/105 (72%), Gaps = 3/105 (2%)
Query: 11 ALDPIE-QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEK 69
AL+P Q L S +A+ +AYCPYS+ VGAALL D IF+GCN+ENA Y + +CAE+
Sbjct: 9 ALEPEHVQQLLLRSREAKKSAYCPYSRFPVGAALLTGDGRIFSGCNIENACYPLGVCAER 68
Query: 70 TAISKAISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSS 114
TAI KAISEG +F+ IA+++ L D F+SPCG+CRQV+ E SS
Sbjct: 69 TAIQKAISEGYQEFRAIAIASDLEDD--FISPCGACRQVMREVSS 111
>gi|108998740|ref|XP_001096632.1| PREDICTED: cytidine deaminase [Macaca mulatta]
Length = 146
Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 59/115 (51%), Positives = 77/115 (66%), Gaps = 5/115 (4%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
Q L S +A+ +AYCPYS VGAALL Q+ IF GCN+ENA Y + ICAE+TAI KA+
Sbjct: 16 QQLLVCSQEAKKSAYCPYSHFPVGAALLTQEGRIFKGCNIENACYPLGICAERTAIQKAV 75
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQV 131
SEG FK IA+S+ + D F+SPCG+CRQV+ EF + + V + K D + V
Sbjct: 76 SEGYKDFKAIAISSDMQDD--FISPCGACRQVMREFGT---NWPVYMTKPDGTYV 125
>gi|328864897|gb|EGG13283.1| cytidine deaminase [Dictyostelium fasciculatum]
Length = 141
Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 55/113 (48%), Positives = 77/113 (68%), Gaps = 6/113 (5%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
+ L + + A+ AYCPYS +VGAALL +D I+TGCNVEN SYG+TICAE+TA +KA+
Sbjct: 8 EQLIDAACDAKTKAYCPYSNFRVGAALLGEDGKIYTGCNVENGSYGLTICAERTAYTKAV 67
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRS 129
SEG KFK + V+ + D +F++PCG+CRQ EF + V VK +++
Sbjct: 68 SEGCKKFKTLVVTTDVTD--RFITPCGACRQFGVEFG----NFDVYCVKPNKT 114
>gi|302874333|ref|YP_003842966.1| cytidine deaminase [Clostridium cellulovorans 743B]
gi|307689400|ref|ZP_07631846.1| cytidine deaminase [Clostridium cellulovorans 743B]
gi|302577190|gb|ADL51202.1| cytidine deaminase [Clostridium cellulovorans 743B]
Length = 132
Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 55/96 (57%), Positives = 68/96 (70%), Gaps = 3/96 (3%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
+ L ++ R+ AY PYS +VGAALL +DD IF GCNVENAS+G T CAE+TAI KA+
Sbjct: 4 EKLIETALDYRNKAYVPYSNFKVGAALLTEDDKIFGGCNVENASFGATNCAERTAIFKAV 63
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEF 112
SEG + FK IAV + D N +PCG CRQV+AEF
Sbjct: 64 SEGYSSFKAIAV---VGDLNNLTAPCGICRQVMAEF 96
>gi|381184010|ref|ZP_09892688.1| cytidine deaminase [Listeriaceae bacterium TTU M1-001]
gi|380316097|gb|EIA19538.1| cytidine deaminase [Listeriaceae bacterium TTU M1-001]
Length = 136
Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 58/121 (47%), Positives = 80/121 (66%), Gaps = 3/121 (2%)
Query: 16 EQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKA 75
E N + +AR+ AY PYSK VGAAL+ D + GCN+ENAS+G+T CAE+TAI KA
Sbjct: 3 ESNFIEQAKRAREYAYVPYSKFPVGAALVTDSDEVVLGCNIENASFGLTNCAERTAIFKA 62
Query: 76 ISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQVGLIT 135
+SEG+T FK++ V A D++ VSPCG+CRQVI+EF + + +K D V + T
Sbjct: 63 VSEGKTNFKKLVVVA---DTDGPVSPCGACRQVISEFCDKDMPVVLTNLKGDAVTVTVET 119
Query: 136 I 136
+
Sbjct: 120 L 120
>gi|443695049|gb|ELT96041.1| hypothetical protein CAPTEDRAFT_211995 [Capitella teleta]
Length = 158
Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 57/117 (48%), Positives = 79/117 (67%), Gaps = 5/117 (4%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
+ L + S++ + AYCPYSK VGAA+L D I+TGCNVE A Y +T+CAE+ AI+KA+
Sbjct: 15 EELIDESVKVKRRAYCPYSKFPVGAAVLGCDGRIYTGCNVECAVYPLTMCAERNAITKAV 74
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQVGL 133
SEG KF + +++ L N ++PCG+CRQ+IAEF D +V + KSDRS L
Sbjct: 75 SEGCKKFTAVVITSDL--KNSIITPCGACRQIIAEF---GMDAEVYMTKSDRSYTKL 126
>gi|365155305|ref|ZP_09351686.1| cytidine deaminase [Bacillus smithii 7_3_47FAA]
gi|363628531|gb|EHL79276.1| cytidine deaminase [Bacillus smithii 7_3_47FAA]
Length = 131
Score = 113 bits (283), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 55/117 (47%), Positives = 79/117 (67%), Gaps = 3/117 (2%)
Query: 15 IEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISK 74
I + L ++ R+ AY PYS +VGAA+ + I++GCN+ENASYG+ CAE+TAI K
Sbjct: 2 ISETLIQAAVAGREKAYAPYSHFKVGAAIATKSGDIYSGCNIENASYGLCNCAERTAIFK 61
Query: 75 AISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQV 131
AISEGQT F A+ A++ D++ +SPCG+CRQVIAEF P + + +K +R +
Sbjct: 62 AISEGQTDF---AMLAVVGDTDGPISPCGACRQVIAEFCPPDMPVILTNLKGERKKT 115
>gi|357238747|ref|ZP_09126083.1| cytidine deaminase [Streptococcus ictaluri 707-05]
gi|356752469|gb|EHI69594.1| cytidine deaminase [Streptococcus ictaluri 707-05]
Length = 129
Score = 113 bits (282), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 60/129 (46%), Positives = 81/129 (62%), Gaps = 15/129 (11%)
Query: 15 IEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISK 74
+ +L +L+I+A NAY PYS +GAAL D +++TGCNVENAS+G+T C E+TAI K
Sbjct: 2 VGTDLVSLAIEASKNAYVPYSHFPIGAALKTADGSVYTGCNVENASFGLTNCGERTAIFK 61
Query: 75 AISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQVGLI 134
AISEG + I AI ++ + VSPCG+CRQV+AEF P+ S V LI
Sbjct: 62 AISEGHRELTEI---AIYGETQEPVSPCGACRQVMAEFFEPS------------SPVTLI 106
Query: 135 TIDGMYLTL 143
DG +T+
Sbjct: 107 AKDGHTVTM 115
>gi|291221758|ref|XP_002730887.1| PREDICTED: FAT tumor suppressor homolog 4-like [Saccoglossus
kowalevskii]
Length = 4161
Score = 113 bits (282), Expect = 3e-23, Method: Composition-based stats.
Identities = 54/103 (52%), Positives = 71/103 (68%), Gaps = 6/103 (5%)
Query: 25 QARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQTKFK 84
+A++ AYCPYS +VG A+L +D T+FTGCNVENA YG+ +CAE+ AI KA++EG KF+
Sbjct: 4040 KAKERAYCPYSNFRVGCAVLTEDGTMFTGCNVENACYGLAMCAERNAIIKAVTEGHRKFQ 4099
Query: 85 RIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSD 127
IAV + D KF PCG CRQ + EF CD+ +VK D
Sbjct: 4100 AIAVGTDIKD--KFKGPCGPCRQFLVEFGE--CDL--YMVKPD 4136
>gi|392428684|ref|YP_006469695.1| cytidine deaminase [Streptococcus intermedius JTH08]
gi|419776385|ref|ZP_14302307.1| cytidine deaminase [Streptococcus intermedius SK54]
gi|423070443|ref|ZP_17059219.1| cytidine deaminase [Streptococcus intermedius F0413]
gi|424787670|ref|ZP_18214434.1| cytidine deaminase [Streptococcus intermedius BA1]
gi|355365804|gb|EHG13524.1| cytidine deaminase [Streptococcus intermedius F0413]
gi|383845796|gb|EID83196.1| cytidine deaminase [Streptococcus intermedius SK54]
gi|391757830|dbj|BAM23447.1| cytidine deaminase [Streptococcus intermedius JTH08]
gi|422113424|gb|EKU17162.1| cytidine deaminase [Streptococcus intermedius BA1]
Length = 129
Score = 113 bits (282), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 56/113 (49%), Positives = 76/113 (67%), Gaps = 5/113 (4%)
Query: 19 LANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISE 78
L NL+I+ AY PYS +GA L+ ++ IFTG N+ENAS+G+T C E+TAI KA+SE
Sbjct: 6 LINLAIETSKKAYVPYSHFPIGAVLVAKNGQIFTGVNIENASFGLTNCGERTAIFKAVSE 65
Query: 79 GQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQV 131
G T FK + V ++ +SPCG+CRQV+AEF S D++V +V DRS V
Sbjct: 66 GVTDFKELIVYG---ETKHPISPCGACRQVMAEFFSK--DLKVTLVAKDRSTV 113
>gi|355677052|gb|AER95874.1| cytidine deaminase [Mustela putorius furo]
Length = 145
Score = 113 bits (282), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 59/123 (47%), Positives = 83/123 (67%), Gaps = 6/123 (4%)
Query: 10 SALDP-IEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAE 68
+AL+P + Q L +A+ +AYCPYS VGAA+L +D IF+GCN+EN Y + +CAE
Sbjct: 8 AALEPELVQRLLLSCREAKKSAYCPYSHFPVGAAILTRDGRIFSGCNIENVCYPLGVCAE 67
Query: 69 KTAISKAISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDR 128
+TAI KAISEG +F+ IA+S+ L D F+SPCG+CRQV+ EF + + V + K D
Sbjct: 68 RTAIQKAISEGHREFRAIAISSDLQDD--FISPCGACRQVMREFGT---NWAVYMTKPDG 122
Query: 129 SQV 131
+ V
Sbjct: 123 TYV 125
>gi|150021384|ref|YP_001306738.1| cytidine deaminase [Thermosipho melanesiensis BI429]
gi|149793905|gb|ABR31353.1| cytidine deaminase [Thermosipho melanesiensis BI429]
Length = 129
Score = 113 bits (282), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 54/113 (47%), Positives = 79/113 (69%), Gaps = 7/113 (6%)
Query: 15 IEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISK 74
+++ L N++I A+ NAY PYS +VGAALL + I+TG NVENASYG+T CAE+ A+ K
Sbjct: 1 MDEKLINMAISAKSNAYAPYSNFKVGAALLTKSGKIYTGSNVENASYGLTCCAERVAVFK 60
Query: 75 AISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSD 127
A+SEG+ +F + V + D+ + +SPCG+CRQV+AEF + V++V D
Sbjct: 61 AVSEGEKEFDTLVV---VGDTEEPISPCGACRQVMAEFG----NFNVILVGKD 106
>gi|220932089|ref|YP_002508997.1| cytidine deaminase [Halothermothrix orenii H 168]
gi|219993399|gb|ACL70002.1| cytidine deaminase [Halothermothrix orenii H 168]
Length = 133
Score = 113 bits (282), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 56/112 (50%), Positives = 79/112 (70%), Gaps = 6/112 (5%)
Query: 12 LDPIEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTA 71
+D + L + +AR+ +Y PYS GAA+L ++ IFTGCN+ENASYG+T CAE+TA
Sbjct: 1 MDKTIKTLIKKAREAREKSYSPYSNFATGAAVLTKEGKIFTGCNIENASYGLTNCAERTA 60
Query: 72 ISKAISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLI 123
I KA+SEG T+F+ +AV A D+ + V PCG+CRQVI EFS D++V++
Sbjct: 61 IFKAVSEGYTEFEALAVVA---DTTRPVPPCGACRQVIREFSP---DMKVIM 106
>gi|297617801|ref|YP_003702960.1| cytidine deaminase [Syntrophothermus lipocalidus DSM 12680]
gi|297145638|gb|ADI02395.1| cytidine deaminase [Syntrophothermus lipocalidus DSM 12680]
Length = 141
Score = 113 bits (282), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 57/110 (51%), Positives = 80/110 (72%), Gaps = 8/110 (7%)
Query: 19 LANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISE 78
L N++ +A++ AY PYS +VGAAL ++TGCNVENASYG+TICAE+TA++KA+SE
Sbjct: 12 LINMARKAQERAYAPYSGFRVGAALQGISGKVYTGCNVENASYGLTICAERTAVAKAVSE 71
Query: 79 GQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDR 128
G+ +FK + A++ D FV PCG+C QV+AEF A D+ +L+ SDR
Sbjct: 72 GEQQFKAL---ALVGDGQGFVFPCGACLQVMAEF---APDLVILL--SDR 113
>gi|156373955|ref|XP_001629575.1| predicted protein [Nematostella vectensis]
gi|156216578|gb|EDO37512.1| predicted protein [Nematostella vectensis]
Length = 148
Score = 113 bits (282), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 60/121 (49%), Positives = 79/121 (65%), Gaps = 6/121 (4%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
Q+L +A++ +Y PYSK +VG+A+L D+ IFTGCNVENASYG+ ICAE+TA+ KA+
Sbjct: 18 QDLIKQCFKAKEFSYSPYSKFRVGSAVLTNDNRIFTGCNVENASYGIGICAERTALVKAV 77
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQVGLITI 136
SEG FK IAV D + PCG+CRQ IAEF DI+V + +D S L+
Sbjct: 78 SEGFRGFKAIAVCT---DVAAYTGPCGACRQFIAEF---GLDIEVYMCSTDHSYQLLLIK 131
Query: 137 D 137
D
Sbjct: 132 D 132
>gi|345021368|ref|ZP_08784981.1| cytidine:deoxycytidine deaminase [Ornithinibacillus scapharcae
TW25]
Length = 132
Score = 113 bits (282), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 54/117 (46%), Positives = 81/117 (69%), Gaps = 3/117 (2%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
Q+L +I+ R+ AY PYSK VGAALL + ++TGCN+ENA+Y +++CAE+ AI KAI
Sbjct: 4 QDLIQKAIEMRERAYVPYSKFPVGAALLTKSGKVYTGCNIENAAYPVSLCAERVAIFKAI 63
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQVGL 133
S+G+T+F +AV+A D+ + V PCGSCRQV++EF S I + + ++ V +
Sbjct: 64 SDGETEFIEMAVAA---DTERPVPPCGSCRQVMSEFFSSDMTIHLTNLHANTKTVNM 117
>gi|145511570|ref|XP_001441707.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124408968|emb|CAK74310.1| unnamed protein product [Paramecium tetraurelia]
Length = 144
Score = 113 bits (282), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 51/115 (44%), Positives = 79/115 (68%), Gaps = 3/115 (2%)
Query: 16 EQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKA 75
E+ L +++A++ AYCPYS +VG +LL +++ ++TGCNVENASYG+ +CAE+ AI KA
Sbjct: 5 EEQLIQEAVKAKERAYCPYSNFRVGCSLLTKNNKLYTGCNVENASYGLCVCAERVAICKA 64
Query: 76 ISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQ 130
+SEG + I VS+ D+++ PCG CRQ I EF P DI+++ + D ++
Sbjct: 65 VSEGDRQISTIVVSS---DTDEPTFPCGMCRQTIIEFCYPGNDIKIIAIGKDHTK 116
>gi|344283429|ref|XP_003413474.1| PREDICTED: cytidine deaminase-like [Loxodonta africana]
Length = 146
Score = 112 bits (281), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 61/122 (50%), Positives = 79/122 (64%), Gaps = 6/122 (4%)
Query: 11 ALDPIE-QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEK 69
AL+P Q L +A+ AYCPYS VGAALL D IF+GCNVENA Y + +CAE+
Sbjct: 9 ALEPEHVQRLLLSCREAKKTAYCPYSHFPVGAALLTGDGRIFSGCNVENACYPLAVCAER 68
Query: 70 TAISKAISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRS 129
TAI KAISEG F+ IA+++ L D F+SPCG+CRQV+ EF + D V + K D +
Sbjct: 69 TAIQKAISEGYKDFRAIAIASDLQDD--FISPCGACRQVMREFGT---DWAVYMTKPDGT 123
Query: 130 QV 131
+
Sbjct: 124 YI 125
>gi|393201606|ref|YP_006463448.1| cytidine deaminase [Solibacillus silvestris StLB046]
gi|406664464|ref|ZP_11072239.1| Cytidine deaminase [Bacillus isronensis B3W22]
gi|327440937|dbj|BAK17302.1| cytidine deaminase [Solibacillus silvestris StLB046]
gi|405387312|gb|EKB46736.1| Cytidine deaminase [Bacillus isronensis B3W22]
Length = 135
Score = 112 bits (281), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 56/115 (48%), Positives = 74/115 (64%), Gaps = 3/115 (2%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
+ L S AR+ AY PYSK +VGAALL +D T++ GCN+ENA Y MT CAE+TA KA+
Sbjct: 4 EQLMEQSKIAREFAYVPYSKFKVGAALLAEDGTVYNGCNIENAGYSMTNCAERTAFFKAV 63
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQV 131
SEG KFK +A+ A P SPCG+CRQV++EF +P + + + D Q
Sbjct: 64 SEGNMKFKALAIVADTPGP---CSPCGACRQVMSEFCAPDMPVYLTNMNGDVQQT 115
>gi|385809423|ref|YP_005845819.1| cytidine deaminase [Ignavibacterium album JCM 16511]
gi|383801471|gb|AFH48551.1| Cytidine deaminase [Ignavibacterium album JCM 16511]
Length = 139
Score = 112 bits (281), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 55/115 (47%), Positives = 81/115 (70%), Gaps = 6/115 (5%)
Query: 13 DPIEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAI 72
D + + L +I+A+ NAY PYS +VG+ALL DD I TGCNVE +S+G+TICAE+ I
Sbjct: 6 DSVNKLLVQKAIEAKQNAYAPYSNFRVGSALLTDDDEIITGCNVEVSSFGLTICAERNVI 65
Query: 73 SKAISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSD 127
+A S+G+ KFK IA++A D+N ++SPCG+CRQVI++ +I V++V +
Sbjct: 66 FQAYSKGKRKFKAIALAA---DTNNYISPCGACRQVISDLCG---NIDVIMVNGN 114
>gi|296206925|ref|XP_002750430.1| PREDICTED: cytidine deaminase [Callithrix jacchus]
Length = 146
Score = 112 bits (281), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 58/115 (50%), Positives = 77/115 (66%), Gaps = 5/115 (4%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
Q L S +A+ +AYCPYS VGAALL QD IF GCN+ENA Y + ICAE+TAI KAI
Sbjct: 16 QRLLVCSQEAKKSAYCPYSHFPVGAALLTQDGRIFQGCNIENACYPLGICAERTAIQKAI 75
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQV 131
SEG F+ IA+++ + D F+SPCG+CRQV+ EF + + V + K D + +
Sbjct: 76 SEGYKDFRAIAIASDMQDD--FISPCGACRQVMREFGT---NWAVYMTKPDGTYI 125
>gi|346986318|ref|NP_001231314.1| cytidine deaminase [Sus scrofa]
Length = 146
Score = 112 bits (281), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 60/122 (49%), Positives = 82/122 (67%), Gaps = 6/122 (4%)
Query: 11 ALDPIE-QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEK 69
AL+P Q L +A+ +AYCPYS+ VGAALL D IF+GCN+ENA Y + +CAE+
Sbjct: 9 ALEPEHVQQLLFSCREAKKSAYCPYSRFPVGAALLTGDGRIFSGCNIENACYPLGVCAER 68
Query: 70 TAISKAISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRS 129
TAI KAISEG +F+ IA+++ L D F+SPCG+CRQV+ EF + + V + K D +
Sbjct: 69 TAIQKAISEGYKEFRAIAIASDLQDD--FISPCGACRQVMREFGT---NWAVYMTKPDGT 123
Query: 130 QV 131
V
Sbjct: 124 YV 125
>gi|154498430|ref|ZP_02036808.1| hypothetical protein BACCAP_02419 [Bacteroides capillosus ATCC
29799]
gi|150272498|gb|EDM99683.1| cytidine deaminase [Pseudoflavonifractor capillosus ATCC 29799]
Length = 134
Score = 112 bits (281), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 59/119 (49%), Positives = 79/119 (66%), Gaps = 7/119 (5%)
Query: 16 EQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKA 75
++ L L+ + +Y PYS VGAAL C D T+FTGCNVENA+YG TICAE+TA+ KA
Sbjct: 3 DRELVELAFTMLERSYVPYSGFPVGAALECADGTVFTGCNVENAAYGSTICAERTALVKA 62
Query: 76 ISEGQT-KFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQVGL 133
+SEG +KRIAV + +S + PCGSCRQ++ EF A D+ VL+ + D + V L
Sbjct: 63 VSEGHRDDWKRIAV---VGNSADYCWPCGSCRQMLYEF---APDLTVLVARGDHAFVTL 115
>gi|347531877|ref|YP_004838640.1| cytidine deaminase [Roseburia hominis A2-183]
gi|345502025|gb|AEN96708.1| cytidine deaminase [Roseburia hominis A2-183]
Length = 139
Score = 112 bits (281), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 55/109 (50%), Positives = 77/109 (70%), Gaps = 4/109 (3%)
Query: 19 LANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISE 78
LA +I+A+++AY PYS +VGAALL D I+TGCN+ENA+Y T CAE+TA KA+SE
Sbjct: 8 LAKKAIEAKEHAYVPYSHFRVGAALLTADGKIYTGCNIENAAYTPTNCAERTAFFKAVSE 67
Query: 79 GQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSD 127
G+ F IA+S D++ ++ PCG CRQV++EF A Q+++VK D
Sbjct: 68 GERDFTAIAISG---DADDYLYPCGVCRQVMSEFCK-ADTFQIILVKED 112
>gi|406658330|ref|ZP_11066470.1| cytidine deaminase [Streptococcus iniae 9117]
gi|405578545|gb|EKB52659.1| cytidine deaminase [Streptococcus iniae 9117]
Length = 129
Score = 112 bits (281), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 58/116 (50%), Positives = 77/116 (66%), Gaps = 4/116 (3%)
Query: 15 IEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISK 74
+ NL L+I A NAY PYS +GAAL ++ +FTGCN+ENAS+G+T C E+TAI K
Sbjct: 2 VATNLVALAIDASKNAYVPYSHFPIGAALKTKEGHVFTGCNIENASFGLTNCGERTAIFK 61
Query: 75 AISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQ 130
A+SEG +K + AI ++ + VSPCG+CRQV+AEF PA LI K R+Q
Sbjct: 62 AVSEG---YKDLTEIAIYGETQEPVSPCGACRQVMAEF-FPASAKVTLIAKDGRTQ 113
>gi|319946688|ref|ZP_08020922.1| cytidine deaminase [Streptococcus australis ATCC 700641]
gi|417920811|ref|ZP_12564310.1| cytidine deaminase [Streptococcus australis ATCC 700641]
gi|319746736|gb|EFV98995.1| cytidine deaminase [Streptococcus australis ATCC 700641]
gi|342827935|gb|EGU62315.1| cytidine deaminase [Streptococcus australis ATCC 700641]
Length = 129
Score = 112 bits (281), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 54/114 (47%), Positives = 76/114 (66%), Gaps = 5/114 (4%)
Query: 18 NLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAIS 77
L +L+++ +NAY PYS +GA L+ + I+TG NVENAS+G+T C E+TAI KA+S
Sbjct: 5 ELIDLAVKTSENAYVPYSHFPIGAVLVTAEGKIYTGVNVENASFGLTNCGERTAIFKAVS 64
Query: 78 EGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQV 131
EG+ FK + + + K VSPCG+CRQV+AEF P D+ V +V D+S V
Sbjct: 65 EGERSFKELIIYG---QTEKPVSPCGACRQVMAEFFEP--DLPVTLVAKDKSTV 113
>gi|217077829|ref|YP_002335547.1| cdd cytidine deaminase [Thermosipho africanus TCF52B]
gi|217037684|gb|ACJ76206.1| cdd cytidine deaminase [Thermosipho africanus TCF52B]
Length = 129
Score = 112 bits (281), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 55/106 (51%), Positives = 77/106 (72%), Gaps = 7/106 (6%)
Query: 19 LANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISE 78
L L+ +A+ NAY PYS +VGAA+L + IFTG NVENASYG++ CAE+ AI KA+SE
Sbjct: 5 LIELAKKAQKNAYAPYSNFKVGAAILTKSGKIFTGANVENASYGLSCCAERNAIFKAVSE 64
Query: 79 GQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIV 124
G+T+F +I V + D+ + +SPCG+CRQV+AEF D +V++V
Sbjct: 65 GETQFSKIVV---VGDTEEPISPCGACRQVMAEFG----DFEVILV 103
>gi|419760423|ref|ZP_14286702.1| cytidine deaminase [Thermosipho africanus H17ap60334]
gi|407514526|gb|EKF49341.1| cytidine deaminase [Thermosipho africanus H17ap60334]
Length = 129
Score = 112 bits (280), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 55/106 (51%), Positives = 77/106 (72%), Gaps = 7/106 (6%)
Query: 19 LANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISE 78
L L+ +A+ NAY PYS +VGAA+L + IFTG NVENASYG++ CAE+ AI KA+SE
Sbjct: 5 LIELAKKAQKNAYAPYSNFKVGAAILTKSGKIFTGANVENASYGLSCCAERNAIFKAVSE 64
Query: 79 GQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIV 124
G+T+F +I V + D+ + +SPCG+CRQV+AEF D +V++V
Sbjct: 65 GETQFSKIVV---VGDTEEPISPCGACRQVMAEFG----DFEVILV 103
>gi|402853253|ref|XP_003891312.1| PREDICTED: cytidine deaminase [Papio anubis]
gi|355557630|gb|EHH14410.1| hypothetical protein EGK_00332 [Macaca mulatta]
gi|355744988|gb|EHH49613.1| hypothetical protein EGM_00303 [Macaca fascicularis]
Length = 146
Score = 112 bits (280), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 58/115 (50%), Positives = 77/115 (66%), Gaps = 5/115 (4%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
Q L S +A+ +AYCPYS VGAALL Q+ IF GCN+ENA Y + ICAE+TAI KA+
Sbjct: 16 QQLLVCSQEAKKSAYCPYSHFPVGAALLTQEGRIFKGCNIENACYPLGICAERTAIQKAV 75
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQV 131
SEG FK IA+++ + D F+SPCG+CRQV+ EF + + V + K D + V
Sbjct: 76 SEGYKDFKAIAIASDMQDD--FISPCGACRQVMREFGT---NWPVYMTKPDGTYV 125
>gi|91089097|ref|XP_971760.1| PREDICTED: similar to cytidine deaminase, putative [Tribolium
castaneum]
gi|270012417|gb|EFA08865.1| hypothetical protein TcasGA2_TC006566 [Tribolium castaneum]
Length = 150
Score = 112 bits (280), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 56/127 (44%), Positives = 83/127 (65%), Gaps = 6/127 (4%)
Query: 5 DIMEFSALDPIEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMT 64
++++F++LD Q L + +R AYCPYSK QVGAA+ IF GCN+EN++Y +
Sbjct: 10 NVVKFASLDSETQALLRQATASRLFAYCPYSKFQVGAAVATTTGAIFGGCNIENSAYTVG 69
Query: 65 ICAEKTAISKAISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIV 124
ICAE+TA++KAISEG FK +AV I N + +PCG+CRQ ++E+ ++++ I
Sbjct: 70 ICAERTALAKAISEGFQSFKAVAV--IGNQENVYTTPCGACRQFMSEYG----NMKIFIS 123
Query: 125 KSDRSQV 131
KSD V
Sbjct: 124 KSDLEHV 130
>gi|157822603|ref|NP_001102158.1| cytidine deaminase [Rattus norvegicus]
gi|392348457|ref|XP_003750114.1| PREDICTED: cytidine deaminase-like [Rattus norvegicus]
gi|149024378|gb|EDL80875.1| cytidine deaminase (predicted) [Rattus norvegicus]
Length = 146
Score = 112 bits (279), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 57/111 (51%), Positives = 76/111 (68%), Gaps = 5/111 (4%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
Q L S +A+ +AYCPYS+ VGAALL D IF+GCNVENA Y + +CAE+TAI KAI
Sbjct: 16 QRLLLSSREAKKSAYCPYSRFPVGAALLTGDGRIFSGCNVENACYPLGVCAERTAIQKAI 75
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSD 127
SEG F+ IA+++ L +F+SPCG+CRQV+ EF + + V + K D
Sbjct: 76 SEGYKDFRAIAIASDL--QEEFISPCGACRQVMREFGT---NWAVYMTKPD 121
>gi|398311472|ref|ZP_10514946.1| cytidine/deoxycytidine deaminase [Bacillus mojavensis RO-H-1]
Length = 136
Score = 112 bits (279), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 56/108 (51%), Positives = 76/108 (70%), Gaps = 7/108 (6%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
Q L +++ARD AY PYSK +VGAALL +D ++ GCN+ENA+Y M CAE+TA+ KA+
Sbjct: 4 QELITEALKARDMAYAPYSKFKVGAALLTKDGKVYRGCNIENAAYSMCNCAERTALFKAV 63
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIV 124
SEG T+F+ +AV+A P VSPCG+CRQVI+E C V++V
Sbjct: 64 SEGDTEFQMLAVAADTPGP---VSPCGACRQVISEL----CTKDVVVV 104
>gi|126328515|ref|XP_001377496.1| PREDICTED: hypothetical protein LOC100027099 [Monodelphis
domestica]
Length = 393
Score = 112 bits (279), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 57/117 (48%), Positives = 77/117 (65%), Gaps = 6/117 (5%)
Query: 12 LDPIE-QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKT 70
L+P + + L L +A+ AYCPYS VGAALL D IF+GCN+ENASY + CAE+T
Sbjct: 257 LEPAQIEKLILLGQEAKKFAYCPYSNFPVGAALLTLDGKIFSGCNIENASYPLGTCAERT 316
Query: 71 AISKAISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSD 127
AI KAISEG +F+ IA+++ + N F++PCG+CRQV+ EF V + K D
Sbjct: 317 AIQKAISEGYKEFRAIAITSNM--KNDFIAPCGACRQVMREFGK---HWYVYMTKED 368
>gi|205374779|ref|ZP_03227572.1| cytidine/deoxycytidine deaminase [Bacillus coahuilensis m4-4]
Length = 132
Score = 112 bits (279), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 54/116 (46%), Positives = 78/116 (67%), Gaps = 3/116 (2%)
Query: 16 EQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKA 75
+ L + +AR+ AY PYSK +VGAALL D T++ GCN+ENASYG+ CAE+TA+ +
Sbjct: 3 DNRLIEEAYKAREKAYAPYSKFKVGAALLTSDGTVYHGCNIENASYGLCNCAERTALFSS 62
Query: 76 ISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQV 131
I++G+T F ++ V A PD VSPCG+CRQVI+E D+ +L + DR+ +
Sbjct: 63 IADGRTDFTKLVVCADTPDP---VSPCGACRQVISELCPEDMDVILLNMTGDRTSM 115
>gi|195472949|ref|XP_002088760.1| GE18745 [Drosophila yakuba]
gi|194174861|gb|EDW88472.1| GE18745 [Drosophila yakuba]
Length = 158
Score = 112 bits (279), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 53/108 (49%), Positives = 70/108 (64%), Gaps = 2/108 (1%)
Query: 5 DIMEFSALDPIEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMT 64
++ EF +LDP Q L + +AR AYCPYS VGAAL D TI++GCN+EN +Y
Sbjct: 14 NVREFQSLDPSIQELILAATEARKQAYCPYSNFAVGAALRTSDGTIYSGCNIENGAYATC 73
Query: 65 ICAEKTAISKAISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEF 112
ICAE+TA KAISEG+ F +A + + N F +PCG CRQ ++EF
Sbjct: 74 ICAERTAAVKAISEGKRDF--VACAVVAQQDNGFTTPCGVCRQFLSEF 119
>gi|195577502|ref|XP_002078609.1| GD23515 [Drosophila simulans]
gi|194190618|gb|EDX04194.1| GD23515 [Drosophila simulans]
Length = 158
Score = 112 bits (279), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 53/108 (49%), Positives = 70/108 (64%), Gaps = 2/108 (1%)
Query: 5 DIMEFSALDPIEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMT 64
++ EF +LDP Q L + +AR AYCPYS VGAAL D TI++GCN+EN +Y
Sbjct: 14 NVREFQSLDPSIQELILAATEARKQAYCPYSNFAVGAALRTSDGTIYSGCNIENGAYATC 73
Query: 65 ICAEKTAISKAISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEF 112
ICAE+TA KAISEG+ F +A + + N F +PCG CRQ ++EF
Sbjct: 74 ICAERTAAVKAISEGKRDF--VACAVVAQQDNGFTTPCGVCRQFLSEF 119
>gi|403386743|ref|ZP_10928800.1| cytidine deaminase [Clostridium sp. JC122]
Length = 132
Score = 112 bits (279), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 55/111 (49%), Positives = 77/111 (69%), Gaps = 5/111 (4%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
+ L +I+AR NAY PYS +VGAA++ +D +I+ GCN+ENASYG CAE+TAI KAI
Sbjct: 4 KKLVKEAIEARKNAYVPYSNFKVGAAVITEDGSIYGGCNIENASYGAANCAERTAIFKAI 63
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSD 127
SEG K IAV + D + + +PCG CRQVI+EF D ++++VK++
Sbjct: 64 SEGHNAIKAIAV---VGDQSTYTAPCGICRQVISEFLEE--DGKIILVKNE 109
>gi|291221319|ref|XP_002730668.1| PREDICTED: cytidine deaminase-like [Saccoglossus kowalevskii]
Length = 138
Score = 112 bits (279), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 53/113 (46%), Positives = 76/113 (67%), Gaps = 7/113 (6%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
+ L N + ++ AYCPYSK +VG A+L +D ++ G N+ENASYG+TICAE+ A++KAI
Sbjct: 8 KTLINECNRVKETAYCPYSKFRVGCAVLTEDGKVYAGSNIENASYGLTICAERAALAKAI 67
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRS 129
+EG KFK +A++ D N+F +PCG+CRQ I EF + +VK D S
Sbjct: 68 TEGHRKFKAMALTT---DLNEFTTPCGACRQFIVEFGK----YDLYMVKPDLS 113
>gi|224080457|ref|XP_002190462.1| PREDICTED: cytidine deaminase [Taeniopygia guttata]
Length = 152
Score = 112 bits (279), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 55/115 (47%), Positives = 78/115 (67%), Gaps = 5/115 (4%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
Q + S +A++ AYCPYS+ VGAALL IF+GCNVENA Y + +CAE+ AI KAI
Sbjct: 23 QLMLRRSREAKNCAYCPYSQFPVGAALLTAGGEIFSGCNVENACYSLGMCAERAAIQKAI 82
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQV 131
SEG T FK +A+++ + D F++PCG+CRQV+ EF + D V + K+D + +
Sbjct: 83 SEGHTSFKAMAIASDMGD--HFITPCGACRQVMREFGT---DWDVYLTKADGTYI 132
>gi|309800089|ref|ZP_07694283.1| cytidine deaminase [Streptococcus infantis SK1302]
gi|308116291|gb|EFO53773.1| cytidine deaminase [Streptococcus infantis SK1302]
Length = 129
Score = 112 bits (279), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 54/116 (46%), Positives = 77/116 (66%), Gaps = 5/116 (4%)
Query: 18 NLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAIS 77
L +L+I+ NAY PYS +GA L+ +D +++TGCN+ENASY +T C E+TAI KAIS
Sbjct: 5 ELIDLAIETSKNAYVPYSHFPIGAVLVAKDGSVYTGCNIENASYPLTNCGERTAIFKAIS 64
Query: 78 EGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQVGL 133
EGQ +F + V + K +SPCG+CRQV+ EF D++V +V D+S V +
Sbjct: 65 EGQREFSELIVYG---QTEKPISPCGACRQVMVEFFEQ--DLKVTLVAKDKSTVEM 115
>gi|330833892|ref|YP_004408620.1| cytidine deaminase [Metallosphaera cuprina Ar-4]
gi|329566031|gb|AEB94136.1| cytidine deaminase [Metallosphaera cuprina Ar-4]
Length = 135
Score = 111 bits (278), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 51/117 (43%), Positives = 81/117 (69%), Gaps = 8/117 (6%)
Query: 12 LDPIEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTA 71
+DP +++L +++A N+Y PYSK++VGAA+L + + + TG NVENASYG+++CAE+ A
Sbjct: 2 IDPSDEDLIEYALKASKNSYSPYSKIKVGAAILTETNDVITGTNVENASYGLSMCAERVA 61
Query: 72 ISKAISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDR 128
+ KAIS G KF++I AI+ D K + PCG+CRQV+ EF ++++ D+
Sbjct: 62 VFKAISMGIRKFRKI---AIILDDGKGIMPCGACRQVLMEFGK-----DIIVITKDK 110
>gi|194207937|ref|XP_001504385.2| PREDICTED: cytidine deaminase-like [Equus caballus]
Length = 145
Score = 111 bits (278), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 62/122 (50%), Positives = 81/122 (66%), Gaps = 6/122 (4%)
Query: 11 ALDPIEQNLANLSIQ-ARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEK 69
AL+P + LS Q A+ +AYCPYS VGAALL D IF+GCN+ENA Y + ICAE+
Sbjct: 9 ALEPEQVQQLLLSCQEAKKSAYCPYSHFPVGAALLTLDGRIFSGCNIENACYPLGICAER 68
Query: 70 TAISKAISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRS 129
TAI KA+SEG FK IA+++ L D F+SPCG+CRQV+ EF + + V + K D +
Sbjct: 69 TAIQKAVSEGYKDFKAIAIASDLQDD--FISPCGACRQVMREFGT---NWDVYMTKLDGT 123
Query: 130 QV 131
V
Sbjct: 124 YV 125
>gi|449275886|gb|EMC84622.1| Cytidine deaminase, partial [Columba livia]
Length = 133
Score = 111 bits (278), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 54/115 (46%), Positives = 79/115 (68%), Gaps = 5/115 (4%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
Q L S +A+ +AYCPYS+ VGAALL IF+GCNVENA Y + +CAE+TAI KAI
Sbjct: 4 QLLLRRSQEAKHSAYCPYSRFPVGAALLTAGGEIFSGCNVENACYSLGVCAERTAILKAI 63
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQV 131
SEG T F+ +A+++ + D+ F+ PCG+CRQ++ EF + D + + K+D + +
Sbjct: 64 SEGHTSFRAMAIASDMGDN--FIVPCGACRQMMREFGT---DWDIYLTKADGTYI 113
>gi|170287888|ref|YP_001738126.1| cytidine deaminase [Thermotoga sp. RQ2]
gi|170175391|gb|ACB08443.1| cytidine deaminase [Thermotoga sp. RQ2]
Length = 132
Score = 111 bits (278), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 55/116 (47%), Positives = 78/116 (67%), Gaps = 8/116 (6%)
Query: 12 LDPIEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTA 71
+DP + L ++++AR AY YS +VGAALL + I+TG NVEN+SYG+TICAE+ A
Sbjct: 2 VDP--EKLVKMALEARKKAYAKYSGFRVGAALLTKSGKIYTGVNVENSSYGLTICAERVA 59
Query: 72 ISKAISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSD 127
+ KA+SEG+ +F IA+++ PD PCG+CRQV+ EFS D+ V+I D
Sbjct: 60 VFKAVSEGEREFAAIAIASDSPDKT---VPCGACRQVLYEFSD---DLDVIIADRD 109
>gi|22256726|sp|Q9S3M0.1|CDD_BACPY RecName: Full=Cytidine deaminase; Short=CDA; AltName: Full=Cytidine
aminohydrolase
gi|5689648|emb|CAB51906.1| cytidine deaminase [Sporosarcina psychrophila]
Length = 136
Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 57/111 (51%), Positives = 76/111 (68%), Gaps = 3/111 (2%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
+ L S +AR+ AY PYSK VGAALL +D TI+ GCN+EN++Y MT CAE+TA KA+
Sbjct: 4 EKLIAESKKAREQAYVPYSKFPVGAALLAEDGTIYHGCNIENSAYSMTNCAERTAFFKAV 63
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSD 127
S+G FK +AV A D+ VSPCG+CRQVIAEF + + + + +K D
Sbjct: 64 SDGVRSFKALAVVA---DTEGPVSPCGACRQVIAEFCNGSMPVYLTNLKGD 111
>gi|188585829|ref|YP_001917374.1| cytidine deaminase [Natranaerobius thermophilus JW/NM-WN-LF]
gi|179350516|gb|ACB84786.1| cytidine deaminase [Natranaerobius thermophilus JW/NM-WN-LF]
Length = 138
Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 55/100 (55%), Positives = 71/100 (71%), Gaps = 3/100 (3%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
+NL + + QA NAY PYS VGAA+ +D FTGCNVENASYG+T CAE+TAI KA+
Sbjct: 12 RNLLSQAEQALQNAYVPYSNYPVGAAMKTKDGETFTGCNVENASYGLTNCAERTAIFKAV 71
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPA 116
S G ++ I V A++ +S + SPCG+CRQVI+EFS A
Sbjct: 72 SHG---YRDIQVMAVVSNSERHASPCGACRQVISEFSDDA 108
>gi|320537589|ref|ZP_08037527.1| cytidine deaminase [Treponema phagedenis F0421]
gi|320145591|gb|EFW37269.1| cytidine deaminase [Treponema phagedenis F0421]
Length = 138
Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 56/123 (45%), Positives = 79/123 (64%), Gaps = 5/123 (4%)
Query: 18 NLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAIS 77
NL + +A AYCPYS VGAALL D ++ TG N+EN SYG++ CAE+TA+ KAIS
Sbjct: 9 NLFEEAAKAAQTAYCPYSNFHVGAALLLDDGSVITGINIENRSYGLSNCAERTALFKAIS 68
Query: 78 EGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQVGLITID 137
G+ FK IA++ PD+N V PCG+CRQVI+EF V++ S++ + T++
Sbjct: 69 MGKKDFKAIAIAT--PDANYPVGPCGACRQVISEFMDKKA---VVLFGSEKQNIVYTTVE 123
Query: 138 GMY 140
+Y
Sbjct: 124 EIY 126
>gi|419799330|ref|ZP_14324686.1| cytidine deaminase [Streptococcus parasanguinis F0449]
gi|385698298|gb|EIG28669.1| cytidine deaminase [Streptococcus parasanguinis F0449]
Length = 129
Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 53/114 (46%), Positives = 75/114 (65%), Gaps = 5/114 (4%)
Query: 18 NLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAIS 77
L +L+++ + AY PYS +GA LL +D I+TG N+ENAS+G+T C E+TAI KA+S
Sbjct: 5 ELIDLAVEVSNQAYVPYSHFPIGAVLLTKDGEIYTGVNIENASFGLTNCGERTAIFKAVS 64
Query: 78 EGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQV 131
EG FK + + + K +SPCG+CRQV+AEF P D+ V +V D+S V
Sbjct: 65 EGARDFKELIIYG---QTEKPISPCGACRQVMAEFFEP--DLPVTLVSKDKSTV 113
>gi|49259416|pdb|1UX1|A Chain A, Bacillus Subtilis Cytidine Deaminase With A Cys53his And
An Arg56gln Substitution
gi|49259417|pdb|1UX1|B Chain B, Bacillus Subtilis Cytidine Deaminase With A Cys53his And
An Arg56gln Substitution
gi|49259418|pdb|1UX1|C Chain C, Bacillus Subtilis Cytidine Deaminase With A Cys53his And
An Arg56gln Substitution
gi|49259419|pdb|1UX1|D Chain D, Bacillus Subtilis Cytidine Deaminase With A Cys53his And
An Arg56gln Substitution
Length = 136
Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 58/124 (46%), Positives = 85/124 (68%), Gaps = 8/124 (6%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
Q L +++ARD AY PYSK QVGAALL +D ++ GCN+ENA+Y M AE+TA+ KA+
Sbjct: 4 QELITEALKARDMAYAPYSKFQVGAALLTKDGKVYRGCNIENAAYSMCNHAEQTALFKAV 63
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSD-RSQVGLIT 135
SEG T+F+ +AV+A P VSPCG+CRQVI+E C V++V ++ + Q+ +T
Sbjct: 64 SEGDTEFQMLAVAADTPGP---VSPCGACRQVISEL----CTKDVIVVLTNLQGQIKEMT 116
Query: 136 IDGM 139
++ +
Sbjct: 117 VEEL 120
>gi|291536115|emb|CBL09227.1| cytidine deaminase [Roseburia intestinalis M50/1]
Length = 139
Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 55/110 (50%), Positives = 76/110 (69%), Gaps = 4/110 (3%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
+ LA SI A++ AY PYS +VGAALL +D I+ GCN+ENA+Y T CAE+TA KA+
Sbjct: 4 KKLAQESIAAKEFAYTPYSHFRVGAALLTKDGRIYRGCNIENAAYTPTNCAERTAFFKAV 63
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKS 126
SEG+ +F IA++ D+N ++ PCG CRQV+AEF P QV++V +
Sbjct: 64 SEGKKEFTAIAING---DANDYLYPCGVCRQVMAEFCDPET-FQVILVNT 109
>gi|387784297|ref|YP_006070380.1| cytidine deaminase (CDA) (Cytidine aminohydrolase) [Streptococcus
salivarius JIM8777]
gi|338745179|emb|CCB95545.1| cytidine deaminase (CDA) (Cytidine aminohydrolase) [Streptococcus
salivarius JIM8777]
Length = 132
Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 55/108 (50%), Positives = 77/108 (71%), Gaps = 5/108 (4%)
Query: 26 ARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQTKFKR 85
A +NAY PYSK +VGAALL ++ IF GCN+ENAS+G+T CAE+TAI KA+SEG F+
Sbjct: 16 AAENAYVPYSKFRVGAALLTKNGRIFQGCNIENASFGLTNCAERTAIFKAVSEGHRDFEC 75
Query: 86 IAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQVGL 133
+AV D+ + +SPCG+CRQV+ EF D +V+++ D+S V +
Sbjct: 76 LAVYG---DTKEPISPCGACRQVMVEFLKS--DSKVILIAGDKSTVEM 118
>gi|408401685|ref|YP_006859648.1| cytidine deaminase [Streptococcus dysgalactiae subsp. equisimilis
RE378]
gi|407967913|dbj|BAM61151.1| cytidine deaminase [Streptococcus dysgalactiae subsp. equisimilis
RE378]
Length = 133
Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 56/118 (47%), Positives = 81/118 (68%), Gaps = 4/118 (3%)
Query: 12 LDPIEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTA 71
L + +L +L+I A +AY PYS +GAAL +D TI+TGCN+ENAS+G+T C E+TA
Sbjct: 3 LQMVATDLVSLAIGASKHAYVPYSHFPIGAALKTKDGTIYTGCNIENASFGLTNCGERTA 62
Query: 72 ISKAISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRS 129
I KA+S+G K +A AI ++ + VSPCG+CRQV+AEF P+ + LI K+ ++
Sbjct: 63 IFKAVSDGH---KELAEIAIYGETQEPVSPCGACRQVMAEFFEPS-SLVTLIAKNGQT 116
>gi|423625102|ref|ZP_17600880.1| cytidine deaminase [Bacillus cereus VD148]
gi|401254782|gb|EJR61007.1| cytidine deaminase [Bacillus cereus VD148]
Length = 131
Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 56/118 (47%), Positives = 77/118 (65%), Gaps = 10/118 (8%)
Query: 29 NAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQTKFKRIAV 88
AY PYSK VGAAL+ ++D I+TGCN+ENASYG+ CAE+TAI KA+SEG+ F + +
Sbjct: 16 KAYIPYSKFPVGAALVTKEDKIYTGCNIENASYGLCNCAERTAIFKAVSEGERDFSYLVI 75
Query: 89 SAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQV-------GLITIDGM 139
+ +++ +SPCG+CRQVIAEF P + + VK D +V G TID +
Sbjct: 76 TG---ETDGPISPCGACRQVIAEFCDPKMRVLLTNVKGDEKEVTVEQLLPGAFTIDDL 130
>gi|38492430|pdb|1MQ0|A Chain A, Crystal Structure Of Human Cytidine Deaminase
gi|38492431|pdb|1MQ0|B Chain B, Crystal Structure Of Human Cytidine Deaminase
Length = 140
Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 56/115 (48%), Positives = 77/115 (66%), Gaps = 5/115 (4%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
Q L S +A+ +AYCPYS VGAALL Q+ IF GCN+ENA Y + ICAE+TAI KA+
Sbjct: 10 QQLLVCSQEAKQSAYCPYSHFPVGAALLTQEGRIFKGCNIENACYPLGICAERTAIQKAV 69
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQV 131
SEG F+ IA+++ + D F+SPCG+CRQV+ EF + + V + K D + +
Sbjct: 70 SEGYKDFRAIAIASDMQDD--FISPCGACRQVMREFGT---NWPVYMTKPDGTYI 119
>gi|333980012|ref|YP_004517957.1| cytidine deaminase [Desulfotomaculum kuznetsovii DSM 6115]
gi|333823493|gb|AEG16156.1| cytidine deaminase [Desulfotomaculum kuznetsovii DSM 6115]
Length = 156
Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 52/114 (45%), Positives = 79/114 (69%), Gaps = 8/114 (7%)
Query: 1 MVGHDIMEFSALDPIEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENAS 60
M+ +M+F P+E+ L N + +R+ AY PYS +VGAA+L + ++ GCN+ENAS
Sbjct: 1 MIDLPVMQF----PVEK-LINTARASRERAYAPYSGFRVGAAILTAEGRLYAGCNIENAS 55
Query: 61 YGMTICAEKTAISKAISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSS 114
YG+T+CAE+ A+ KA+S G+ +F A A++ DS + +PCG+CRQV+AEF S
Sbjct: 56 YGLTVCAERVALFKAVSNGERQF---AALAVIADSEDYCTPCGACRQVLAEFGS 106
>gi|332981674|ref|YP_004463115.1| cytidine deaminase [Mahella australiensis 50-1 BON]
gi|332699352|gb|AEE96293.1| cytidine deaminase [Mahella australiensis 50-1 BON]
Length = 127
Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 53/103 (51%), Positives = 72/103 (69%), Gaps = 6/103 (5%)
Query: 25 QARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQTKFK 84
+AR+ AY PYS +VGAALL Q I+TGCN+ENA+YG + CAE+TAI KA+SEG + F
Sbjct: 13 EARERAYAPYSHFRVGAALLTQSGRIYTGCNIENAAYGASNCAERTAIFKAVSEGYSSFS 72
Query: 85 RIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSD 127
+ AI+ D+ +++ PCG CRQVI EFS DI + + +D
Sbjct: 73 AM---AIISDAEEYIFPCGICRQVIWEFSH---DIDIFVCTAD 109
>gi|297666158|ref|XP_002811396.1| PREDICTED: cytidine deaminase [Pongo abelii]
Length = 146
Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 56/115 (48%), Positives = 77/115 (66%), Gaps = 5/115 (4%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
Q L S +A+ +AYCPYS VGAALL Q+ IF GCN+ENA Y + ICAE+TAI KA+
Sbjct: 16 QQLLVCSQEAKKSAYCPYSHFPVGAALLTQEGRIFKGCNIENACYPLGICAERTAIQKAV 75
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQV 131
SEG F+ IA+++ + D F+SPCG+CRQV+ EF + + V + K D + +
Sbjct: 76 SEGYKDFRAIAIASDMQDD--FISPCGACRQVMREFGT---NWPVYMTKPDGTYI 125
>gi|418964628|ref|ZP_13516419.1| cytidine deaminase [Streptococcus constellatus subsp. constellatus
SK53]
gi|383344642|gb|EID22799.1| cytidine deaminase [Streptococcus constellatus subsp. constellatus
SK53]
Length = 129
Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 55/113 (48%), Positives = 78/113 (69%), Gaps = 5/113 (4%)
Query: 19 LANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISE 78
L +L+I+ AY PYS +GA L+ ++D IFTG N+ENAS+G+T C E+TAI KAISE
Sbjct: 6 LIDLAIETSKKAYVPYSHFPIGAVLVAKNDQIFTGVNIENASFGLTNCGERTAIFKAISE 65
Query: 79 GQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQV 131
G T+F+ + V ++ K VSPCG+CRQV+AEF +++V +V D+S V
Sbjct: 66 GVTEFEELIVYG---ETQKPVSPCGACRQVMAEFFPQ--NLKVTLVAKDKSTV 113
>gi|417924014|ref|ZP_12567469.1| cytidine deaminase [Streptococcus mitis SK569]
gi|418967352|ref|ZP_13519017.1| cytidine deaminase [Streptococcus mitis SK616]
gi|342836467|gb|EGU70680.1| cytidine deaminase [Streptococcus mitis SK569]
gi|383344540|gb|EID22703.1| cytidine deaminase [Streptococcus mitis SK616]
Length = 129
Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 55/115 (47%), Positives = 76/115 (66%), Gaps = 5/115 (4%)
Query: 19 LANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISE 78
L L+I+ NAY PYS VGA L+ +D +I+TG N+ENASY +T C E+TAI KA+SE
Sbjct: 6 LIELAIETSKNAYVPYSHFPVGAVLVAKDGSIYTGVNIENASYSLTNCGERTAIFKAVSE 65
Query: 79 GQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQVGL 133
GQ +F + V + K +SPCG+CRQV+AEF D++V +V D+S V +
Sbjct: 66 GQREFSELIVYG---QTEKPISPCGACRQVMAEFFEQ--DLKVTLVAKDKSTVEM 115
>gi|426328168|ref|XP_004024873.1| PREDICTED: cytidine deaminase [Gorilla gorilla gorilla]
Length = 146
Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 56/115 (48%), Positives = 77/115 (66%), Gaps = 5/115 (4%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
Q L S +A+ +AYCPYS VGAALL Q+ IF GCN+ENA Y + ICAE+TAI KA+
Sbjct: 16 QQLLVCSQEAKKSAYCPYSHFPVGAALLTQEGRIFKGCNIENACYPLGICAERTAIQKAV 75
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQV 131
SEG F+ IA+++ + D F+SPCG+CRQV+ EF + + V + K D + +
Sbjct: 76 SEGYKDFRAIAIASDMQDD--FISPCGACRQVMREFGT---NWPVYMTKPDGTYI 125
>gi|32450432|gb|AAH54036.1| Cytidine deaminase [Homo sapiens]
gi|312153078|gb|ADQ33051.1| cytidine deaminase [synthetic construct]
Length = 146
Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 56/115 (48%), Positives = 77/115 (66%), Gaps = 5/115 (4%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
Q L S +A+ +AYCPYS VGAALL Q+ IF GCN+ENA Y + ICAE+TAI KA+
Sbjct: 16 QQLLVCSQEAKQSAYCPYSHFPVGAALLTQEGRIFKGCNIENACYPLGICAERTAIQKAV 75
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQV 131
SEG F+ IA+++ + D F+SPCG+CRQV+ EF + + V + K D + +
Sbjct: 76 SEGYKDFRAIAIASDMQDD--FISPCGACRQVMREFGT---NWPVYMTKPDGTYI 125
>gi|195386506|ref|XP_002051945.1| GJ24345 [Drosophila virilis]
gi|194148402|gb|EDW64100.1| GJ24345 [Drosophila virilis]
Length = 159
Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 52/121 (42%), Positives = 76/121 (62%), Gaps = 2/121 (1%)
Query: 5 DIMEFSALDPIEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMT 64
++ E +LD Q L + +AR++AYCPYS VGAA+ D I+TGCN+EN +Y +
Sbjct: 14 NVREHDSLDASIQELIRAAAEARNHAYCPYSNFAVGAAIRTSDGAIYTGCNIENGAYAAS 73
Query: 65 ICAEKTAISKAISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIV 124
ICAE+TA KA+SEG+ +F +A + + N F +PCG CRQ ++EF+ DI +
Sbjct: 74 ICAERTATVKALSEGKREF--VACAVVAEQDNGFTTPCGVCRQFLSEFAVNGKDIPLYAA 131
Query: 125 K 125
K
Sbjct: 132 K 132
>gi|452992447|emb|CCQ96072.1| cytidine/deoxycytidine deaminase [Clostridium ultunense Esp]
Length = 141
Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 51/100 (51%), Positives = 73/100 (73%), Gaps = 3/100 (3%)
Query: 16 EQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKA 75
++ L ++ AR+ AY PYS VGAAL+ ++ IFTGCN+ENA++ +T CAE+T + KA
Sbjct: 11 KEELVKKALAAREKAYVPYSNFPVGAALITKEGKIFTGCNIENAAFPVTCCAERTVLFKA 70
Query: 76 ISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSP 115
+SEG+ F+ +AV A D+++ VSPCGSCRQV+AEF P
Sbjct: 71 VSEGERSFEALAVVA---DTDRPVSPCGSCRQVLAEFCPP 107
>gi|443722792|gb|ELU11518.1| hypothetical protein CAPTEDRAFT_109312, partial [Capitella teleta]
Length = 134
Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 56/120 (46%), Positives = 79/120 (65%), Gaps = 6/120 (5%)
Query: 19 LANLSIQARDNAYCPYSKLQVGAALLCQDDTIFT-GCNVENASYGMTICAEKTAISKAIS 77
L + + ARDNAYCPYSK +VGAA+LC + +I + GCNVEN SYG T+CAE+ A+ A+S
Sbjct: 1 LIDSAANARDNAYCPYSKFRVGAAVLCDNGSILSAGCNVENVSYGATVCAERVALFNAVS 60
Query: 78 EGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQVGLITID 137
G+TKF+ IA+ + KF PCG CRQ + EF S D ++ +VK + + + +D
Sbjct: 61 SGRTKFRAIAICCDI--LGKFKGPCGMCRQALIEFGS---DWEIYLVKPESKEWKKVDLD 115
>gi|11386157|ref|NP_001776.1| cytidine deaminase [Homo sapiens]
gi|114554458|ref|XP_001161389.1| PREDICTED: cytidine deaminase isoform 2 [Pan troglodytes]
gi|397486674|ref|XP_003814450.1| PREDICTED: cytidine deaminase [Pan paniscus]
gi|1705718|sp|P32320.2|CDD_HUMAN RecName: Full=Cytidine deaminase; AltName: Full=Cytidine
aminohydrolase
gi|598149|gb|AAA57254.1| cytidine deaminase [Homo sapiens]
gi|2769252|emb|CAA04113.1| cytidine deaminase [Homo sapiens]
gi|4321793|gb|AAD15828.1| cytidine deaminase [Homo sapiens]
gi|119615338|gb|EAW94932.1| cytidine deaminase, isoform CRA_b [Homo sapiens]
gi|410209450|gb|JAA01944.1| cytidine deaminase [Pan troglodytes]
gi|410247368|gb|JAA11651.1| cytidine deaminase [Pan troglodytes]
gi|410301170|gb|JAA29185.1| cytidine deaminase [Pan troglodytes]
gi|410341749|gb|JAA39821.1| cytidine deaminase [Pan troglodytes]
Length = 146
Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 56/115 (48%), Positives = 77/115 (66%), Gaps = 5/115 (4%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
Q L S +A+ +AYCPYS VGAALL Q+ IF GCN+ENA Y + ICAE+TAI KA+
Sbjct: 16 QQLLVCSQEAKKSAYCPYSHFPVGAALLTQEGRIFKGCNIENACYPLGICAERTAIQKAV 75
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQV 131
SEG F+ IA+++ + D F+SPCG+CRQV+ EF + + V + K D + +
Sbjct: 76 SEGYKDFRAIAIASDMQDD--FISPCGACRQVMREFGT---NWPVYMTKPDGTYI 125
>gi|358054437|dbj|GAA99363.1| hypothetical protein E5Q_06059 [Mixia osmundae IAM 14324]
Length = 160
Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 53/90 (58%), Positives = 65/90 (72%), Gaps = 3/90 (3%)
Query: 23 SIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQTK 82
+++ARD AYCPYS +VGA LL F GCNVENASYG TICAE+TA+ KA+SEG +
Sbjct: 18 ALKARDAAYCPYSDFRVGACLLADTGVFFMGCNVENASYGGTICAERTAVVKAVSEGARR 77
Query: 83 FKRIAVSAILPDSNKFVSPCGSCRQVIAEF 112
F+ IAV+ D N+ SPCG CRQV+ EF
Sbjct: 78 FRAIAVAT---DLNEACSPCGLCRQVLREF 104
>gi|307169139|gb|EFN61955.1| Cytidine deaminase [Camponotus floridanus]
Length = 150
Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 59/131 (45%), Positives = 82/131 (62%), Gaps = 3/131 (2%)
Query: 1 MVGHDIMEFSALDPIEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENAS 60
M +I++F+ LD Q L S R+ +Y PYSK +VGAA+ C D +I GCNVENAS
Sbjct: 1 MYTGEIVDFTTLDKDIQELIRESAAVREKSYSPYSKFKVGAAVRCTDGSISRGCNVENAS 60
Query: 61 YGMTICAEKTAISKAISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQ 120
+ ++CAE AI A+SEG+ KF + V A ++ KF +PCG CRQVI+EF +I
Sbjct: 61 FPASVCAETAAIVHAVSEGKKKFTALTVVAD-QENVKFTTPCGVCRQVISEFFGD--NIP 117
Query: 121 VLIVKSDRSQV 131
+ + +SD QV
Sbjct: 118 IYLTRSDMKQV 128
>gi|240146025|ref|ZP_04744626.1| cytidine deaminase [Roseburia intestinalis L1-82]
gi|257201841|gb|EEV00126.1| cytidine deaminase [Roseburia intestinalis L1-82]
gi|291539025|emb|CBL12136.1| cytidine deaminase [Roseburia intestinalis XB6B4]
Length = 139
Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 55/110 (50%), Positives = 76/110 (69%), Gaps = 4/110 (3%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
+ LA SI A++ AY PYS +VGAALL +D I+ GCN+ENA+Y T CAE+TA KA+
Sbjct: 4 KKLAQESIAAKEFAYTPYSHFRVGAALLTKDGGIYRGCNIENAAYTPTNCAERTAFFKAV 63
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKS 126
SEG+ +F IA++ D+N ++ PCG CRQV+AEF P QV++V +
Sbjct: 64 SEGKKEFTAIAING---DANDYLYPCGVCRQVMAEFCDPET-FQVILVNT 109
>gi|206978413|ref|ZP_03239282.1| cytidine deaminase [Bacillus cereus H3081.97]
gi|217961791|ref|YP_002340361.1| cytidine deaminase [Bacillus cereus AH187]
gi|222097746|ref|YP_002531803.1| cytidine deaminase [Bacillus cereus Q1]
gi|229141038|ref|ZP_04269581.1| Cytidine deaminase [Bacillus cereus BDRD-ST26]
gi|229198427|ref|ZP_04325133.1| Cytidine deaminase [Bacillus cereus m1293]
gi|375286306|ref|YP_005106745.1| cytidine deaminase [Bacillus cereus NC7401]
gi|384182121|ref|YP_005567883.1| cytidine deaminase [Bacillus thuringiensis serovar finitimus
YBT-020]
gi|423354794|ref|ZP_17332419.1| cytidine deaminase [Bacillus cereus IS075]
gi|423373820|ref|ZP_17351159.1| cytidine deaminase [Bacillus cereus AND1407]
gi|423570541|ref|ZP_17546786.1| cytidine deaminase [Bacillus cereus MSX-A12]
gi|423574019|ref|ZP_17550138.1| cytidine deaminase [Bacillus cereus MSX-D12]
gi|423604049|ref|ZP_17579942.1| cytidine deaminase [Bacillus cereus VD102]
gi|206743369|gb|EDZ54807.1| cytidine deaminase [Bacillus cereus H3081.97]
gi|217068168|gb|ACJ82418.1| cytidine deaminase [Bacillus cereus AH187]
gi|221241804|gb|ACM14514.1| cytidine deaminase [Bacillus cereus Q1]
gi|228585127|gb|EEK43239.1| Cytidine deaminase [Bacillus cereus m1293]
gi|228642471|gb|EEK98759.1| Cytidine deaminase [Bacillus cereus BDRD-ST26]
gi|324328205|gb|ADY23465.1| cytidine deaminase [Bacillus thuringiensis serovar finitimus
YBT-020]
gi|358354833|dbj|BAL20005.1| cytidine deaminase [Bacillus cereus NC7401]
gi|401086104|gb|EJP94335.1| cytidine deaminase [Bacillus cereus IS075]
gi|401095221|gb|EJQ03281.1| cytidine deaminase [Bacillus cereus AND1407]
gi|401203737|gb|EJR10572.1| cytidine deaminase [Bacillus cereus MSX-A12]
gi|401212588|gb|EJR19331.1| cytidine deaminase [Bacillus cereus MSX-D12]
gi|401245735|gb|EJR52088.1| cytidine deaminase [Bacillus cereus VD102]
Length = 132
Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 54/96 (56%), Positives = 68/96 (70%), Gaps = 3/96 (3%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
Q L +I+AR AY PYSK QVGAALL QD ++ GCNVENASYG+ CAE+TA+ KA+
Sbjct: 4 QQLIQEAIEARKQAYVPYSKFQVGAALLTQDGKVYRGCNVENASYGLCNCAERTALFKAV 63
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEF 112
SEG +F IA+ A D+ + V PCG+CRQV+ E
Sbjct: 64 SEGDKEFVAIAIVA---DTKRPVPPCGACRQVMVEL 96
>gi|263657|gb|AAB24946.1| cytidine deaminase [Homo sapiens]
Length = 145
Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 56/115 (48%), Positives = 77/115 (66%), Gaps = 5/115 (4%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
Q L S +A+ +AYCPYS VGAALL Q+ IF GCN+ENA Y + ICAE+TAI KA+
Sbjct: 15 QQLLVCSQEAKQSAYCPYSHFPVGAALLTQEGRIFKGCNIENACYPLGICAERTAIQKAV 74
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQV 131
SEG F+ IA+++ + D F+SPCG+CRQV+ EF + + V + K D + +
Sbjct: 75 SEGYKDFRAIAIASDMQDD--FISPCGACRQVMREFGT---NWPVYMTKPDGTYI 124
>gi|262282347|ref|ZP_06060115.1| cytidine deaminase [Streptococcus sp. 2_1_36FAA]
gi|262261638|gb|EEY80336.1| cytidine deaminase [Streptococcus sp. 2_1_36FAA]
Length = 129
Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 53/114 (46%), Positives = 78/114 (68%), Gaps = 5/114 (4%)
Query: 18 NLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAIS 77
+L +L+++ NAY PYS +GA L+ +D +FTG NVENAS+G+T C E+TAI KA+S
Sbjct: 5 DLIDLAVETSKNAYVPYSHFPIGAVLVAKDGRVFTGVNVENASFGLTNCGERTAIFKAVS 64
Query: 78 EGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQV 131
EG +F+ + V + K +SPCG+CRQV+AEF + D++V +V D+S V
Sbjct: 65 EGALEFEELIVYG---QTEKPISPCGACRQVMAEFFNK--DLKVTLVAKDKSTV 113
>gi|395821087|ref|XP_003783879.1| PREDICTED: cytidine deaminase [Otolemur garnettii]
Length = 146
Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 56/109 (51%), Positives = 76/109 (69%), Gaps = 5/109 (4%)
Query: 23 SIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQTK 82
S +A+ +AYCPYS VGAALL +D IF+GCN+ENA Y + ICAE+TAI KA+SEG
Sbjct: 22 SQEAKKSAYCPYSHFPVGAALLTKDGKIFSGCNIENACYPLGICAERTAIQKAVSEGYKD 81
Query: 83 FKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQV 131
F IA+++ L D+ F+SPCG+CRQV+ EF + + V + K D + V
Sbjct: 82 FSAIAIASDLQDN--FISPCGACRQVMREFGT---NWAVYMTKLDGTYV 125
>gi|312866719|ref|ZP_07726933.1| cytidine deaminase [Streptococcus parasanguinis F0405]
gi|311097800|gb|EFQ56030.1| cytidine deaminase [Streptococcus parasanguinis F0405]
Length = 129
Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 53/114 (46%), Positives = 74/114 (64%), Gaps = 5/114 (4%)
Query: 18 NLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAIS 77
L +L+++ AY PYS +GA LL +D I+TG N+ENAS+G+T C E+TAI KA+S
Sbjct: 5 ELIDLAVEVSQQAYVPYSHFPIGAVLLTKDGEIYTGVNIENASFGLTNCGERTAIFKAVS 64
Query: 78 EGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQV 131
EG FK + + + K +SPCG+CRQV+AEF P D+ V +V D+S V
Sbjct: 65 EGARDFKELIIYG---QTEKPISPCGACRQVMAEFFEP--DLPVTLVSKDKSTV 113
>gi|333905036|ref|YP_004478907.1| cytidine deaminase [Streptococcus parauberis KCTC 11537]
gi|333120301|gb|AEF25235.1| cytidine deaminase [Streptococcus parauberis KCTC 11537]
gi|457095348|gb|EMG25843.1| Cytidine deaminase [Streptococcus parauberis KRS-02083]
Length = 129
Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 55/113 (48%), Positives = 72/113 (63%), Gaps = 4/113 (3%)
Query: 18 NLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAIS 77
NL L+I A +AY PYS +GAALL ++ F+GCN+ENAS+G+T C E+TAI KA+S
Sbjct: 5 NLVQLAIDASKHAYVPYSHFPIGAALLTKEGHAFSGCNIENASFGLTNCGERTAIFKAVS 64
Query: 78 EGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQ 130
EG + I + D VSPCG+CRQV+AEF P + LI K R+Q
Sbjct: 65 EGYQELSEIVIYGQTKDP---VSPCGACRQVMAEFFPPTAKV-TLIAKDGRTQ 113
>gi|24582741|ref|NP_609195.1| CG8360, isoform A [Drosophila melanogaster]
gi|442626747|ref|NP_001260232.1| CG8360, isoform C [Drosophila melanogaster]
gi|7297361|gb|AAF52621.1| CG8360, isoform A [Drosophila melanogaster]
gi|39840962|gb|AAR31117.1| RH58379p [Drosophila melanogaster]
gi|220950532|gb|ACL87809.1| CG8360-PA [synthetic construct]
gi|440213540|gb|AGB92768.1| CG8360, isoform C [Drosophila melanogaster]
Length = 158
Score = 110 bits (276), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 52/108 (48%), Positives = 70/108 (64%), Gaps = 2/108 (1%)
Query: 5 DIMEFSALDPIEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMT 64
++ EF +LDP Q + + +AR AYCPYS VGAAL D TI++GCN+EN +Y
Sbjct: 14 NVREFQSLDPSIQEIILAATEARKQAYCPYSNFAVGAALRTSDGTIYSGCNIENGAYATC 73
Query: 65 ICAEKTAISKAISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEF 112
ICAE+TA KAISEG+ F +A + + N F +PCG CRQ ++EF
Sbjct: 74 ICAERTAAVKAISEGKRDF--VACAVVAQQDNGFTTPCGVCRQFLSEF 119
>gi|392331379|ref|ZP_10275994.1| cytidine deaminase [Streptococcus canis FSL Z3-227]
gi|391419058|gb|EIQ81870.1| cytidine deaminase [Streptococcus canis FSL Z3-227]
Length = 129
Score = 110 bits (276), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 55/115 (47%), Positives = 80/115 (69%), Gaps = 4/115 (3%)
Query: 15 IEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISK 74
+ +L +L+I A +AY PYS +GAAL +D TI+TGCN+ENAS+G+T C E+TAI K
Sbjct: 2 VATDLVSLAIDASKHAYVPYSHFPIGAALKTKDGTIYTGCNIENASFGLTNCGERTAIFK 61
Query: 75 AISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRS 129
A+S+G K +A AI ++ + VSPCG+CRQV+AEF P+ + LI K+ ++
Sbjct: 62 AVSDGH---KELAEIAIYGETQEPVSPCGACRQVMAEFFEPS-SLVTLIAKNGQT 112
>gi|329770313|ref|ZP_08261698.1| hypothetical protein HMPREF0433_01462 [Gemella sanguinis M325]
gi|328836766|gb|EGF86418.1| hypothetical protein HMPREF0433_01462 [Gemella sanguinis M325]
Length = 430
Score = 110 bits (276), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 58/102 (56%), Positives = 72/102 (70%), Gaps = 3/102 (2%)
Query: 13 DPIEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAI 72
+ I + L N +I+A +Y PYS+ +VGAALL +D I+TGCN+ENASY T CAE+TAI
Sbjct: 294 EEINRLLINKAIEATKFSYVPYSEFKVGAALLTEDGEIYTGCNIENASYTPTNCAERTAI 353
Query: 73 SKAISEGQTKFKRIAVSAILPDSN--KFVSPCGSCRQVIAEF 112
KA+SEG TKFK+IAV P N + PCG CRQVIAEF
Sbjct: 354 FKAVSEGITKFKKIAVVG-GPKGNIETYCPPCGVCRQVIAEF 394
>gi|291563609|emb|CBL42425.1| cytidine deaminase [butyrate-producing bacterium SS3/4]
Length = 138
Score = 110 bits (276), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 53/113 (46%), Positives = 74/113 (65%), Gaps = 3/113 (2%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
+ L +++AR +YCPYS VGAALLC D T+F GCN+ENA+Y T CAE+TA+ KA+
Sbjct: 4 KELVREALEARKQSYCPYSGFAVGAALLCGDGTVFRGCNIENAAYPATNCAERTAMFKAV 63
Query: 77 SEGQTKFKRIAV--SAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSD 127
SEG T F+ IA+ + F +PCG CRQV+AEF P +++++ D
Sbjct: 64 SEGNTDFRAIAIVGGPKGKEPKDFCAPCGVCRQVMAEFCDPE-TFRIVLMNGD 115
>gi|251782459|ref|YP_002996761.1| cytidine deaminase [Streptococcus dysgalactiae subsp. equisimilis
GGS_124]
gi|386317060|ref|YP_006013224.1| cytidine deaminase [Streptococcus dysgalactiae subsp. equisimilis
ATCC 12394]
gi|410494790|ref|YP_006904636.1| cytidine deaminase [Streptococcus dysgalactiae subsp. equisimilis
AC-2713]
gi|417753370|ref|ZP_12401499.1| cytidine deaminase [Streptococcus dysgalactiae subsp. equisimilis
SK1249]
gi|242391088|dbj|BAH81547.1| cytidine deaminase [Streptococcus dysgalactiae subsp. equisimilis
GGS_124]
gi|323127347|gb|ADX24644.1| cytidine deaminase [Streptococcus dysgalactiae subsp. equisimilis
ATCC 12394]
gi|333770287|gb|EGL47331.1| cytidine deaminase [Streptococcus dysgalactiae subsp. equisimilis
SK1249]
gi|410439950|emb|CCI62578.1| cytidine deaminase [Streptococcus dysgalactiae subsp. equisimilis
AC-2713]
Length = 129
Score = 110 bits (276), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 55/115 (47%), Positives = 80/115 (69%), Gaps = 4/115 (3%)
Query: 15 IEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISK 74
+ +L +L+I A +AY PYS +GAAL +D TI+TGCN+ENAS+G+T C E+TAI K
Sbjct: 2 VATDLVSLAIGASKHAYVPYSHFPIGAALKTKDGTIYTGCNIENASFGLTNCGERTAIFK 61
Query: 75 AISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRS 129
A+S+G K +A AI ++ + VSPCG+CRQV+AEF P+ + LI K+ ++
Sbjct: 62 AVSDGH---KELAEIAIYGETQEPVSPCGACRQVMAEFFEPS-SLVTLIAKNGQT 112
>gi|332244906|ref|XP_003271607.1| PREDICTED: cytidine deaminase [Nomascus leucogenys]
Length = 146
Score = 110 bits (276), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 56/115 (48%), Positives = 77/115 (66%), Gaps = 5/115 (4%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
Q L S +A+ +AYCPYS VGAALL Q+ IF GCN+ENA Y + ICAE+TAI KA+
Sbjct: 16 QQLLLCSQEAKKSAYCPYSHFPVGAALLTQEGRIFKGCNIENACYPLGICAERTAIQKAV 75
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQV 131
SEG F+ IA+++ + D F+SPCG+CRQV+ EF + + V + K D + +
Sbjct: 76 SEGYKDFRAIAIASDMQDD--FISPCGACRQVMREFGT---NWPVYMTKPDGTYI 125
>gi|456371015|gb|EMF49911.1| Cytidine deaminase [Streptococcus parauberis KRS-02109]
Length = 128
Score = 110 bits (276), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 55/113 (48%), Positives = 72/113 (63%), Gaps = 4/113 (3%)
Query: 18 NLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAIS 77
NL L+I A +AY PYS +GAALL ++ F+GCN+ENAS+G+T C E+TAI KA+S
Sbjct: 4 NLVQLAIDASKHAYVPYSHFPIGAALLTKEGHAFSGCNIENASFGLTNCGERTAIFKAVS 63
Query: 78 EGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQ 130
EG + I + D VSPCG+CRQV+AEF P + LI K R+Q
Sbjct: 64 EGYQELSEIVIYGQTKDP---VSPCGACRQVMAEFFPPTAKV-TLIAKDGRTQ 112
>gi|338730764|ref|YP_004660156.1| cytidine deaminase [Thermotoga thermarum DSM 5069]
gi|335365115|gb|AEH51060.1| cytidine deaminase [Thermotoga thermarum DSM 5069]
Length = 134
Score = 110 bits (276), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 53/116 (45%), Positives = 78/116 (67%), Gaps = 7/116 (6%)
Query: 12 LDPIEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTA 71
+ P + L L+++A AY PYS +VGAALL + ++ GCNVENASYG+TICAE+ A
Sbjct: 3 IKPKNEELIELALKAMQKAYAPYSNFKVGAALLTKSGKVYLGCNVENASYGLTICAERVA 62
Query: 72 ISKAISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSD 127
I A+++G+ +F+++ V A P VSPCG+CRQV+AEF + +V++V D
Sbjct: 63 IFSAVADGEREFEKLVVVANTPLP---VSPCGACRQVMAEFG----NFEVILVGKD 111
>gi|417928338|ref|ZP_12571726.1| cytidine deaminase [Streptococcus dysgalactiae subsp. equisimilis
SK1250]
gi|340766212|gb|EGR88738.1| cytidine deaminase [Streptococcus dysgalactiae subsp. equisimilis
SK1250]
Length = 129
Score = 110 bits (276), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 55/115 (47%), Positives = 80/115 (69%), Gaps = 4/115 (3%)
Query: 15 IEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISK 74
+ +L +L+I A +AY PYS +GAAL +D TI+TGCN+ENAS+G+T C E+TAI K
Sbjct: 2 VATDLVSLAIGASKHAYVPYSHFPIGAALKTKDGTIYTGCNIENASFGLTNCGERTAIFK 61
Query: 75 AISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRS 129
A+S+G K +A AI ++ + VSPCG+CRQV+AEF P+ + LI K+ ++
Sbjct: 62 AVSDGH---KELAEIAIYGETQEPVSPCGACRQVMAEFFEPS-SLVTLIAKNGQT 112
>gi|402815646|ref|ZP_10865238.1| cytidine deaminase Cdd [Paenibacillus alvei DSM 29]
gi|402506686|gb|EJW17209.1| cytidine deaminase Cdd [Paenibacillus alvei DSM 29]
Length = 133
Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 55/98 (56%), Positives = 73/98 (74%), Gaps = 4/98 (4%)
Query: 15 IEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISK 74
++ L +++AR AY PYS QVGAA+L D I+ GCNVENASYG+T CAE+TA+ K
Sbjct: 1 MKDQLIQEALEARKQAYAPYSHFQVGAAILA-DGVIYRGCNVENASYGLTNCAERTAVFK 59
Query: 75 AISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEF 112
A+SEG+TK + +AV A D++ VSPCG+CRQV+AEF
Sbjct: 60 AVSEGKTKVEAVAVVA---DTDGPVSPCGACRQVLAEF 94
>gi|374296311|ref|YP_005046502.1| cytidine deaminase [Clostridium clariflavum DSM 19732]
gi|359825805|gb|AEV68578.1| cytidine deaminase [Clostridium clariflavum DSM 19732]
Length = 130
Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 51/97 (52%), Positives = 70/97 (72%), Gaps = 3/97 (3%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
+ L +L+ + + NAY PYS VGAAL+ ++TG NVENASYG TICAE+TAI KA+
Sbjct: 4 EKLISLANEVKKNAYAPYSNFHVGAALITDSGKVYTGTNVENASYGATICAERTAIVKAV 63
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFS 113
SEG+ K K +A+S DS+ ++ PCG CRQ+I+EF+
Sbjct: 64 SEGERKIKALAISG---DSDDYIYPCGICRQIISEFA 97
>gi|281411524|ref|YP_003345603.1| cytidine deaminase [Thermotoga naphthophila RKU-10]
gi|281372627|gb|ADA66189.1| cytidine deaminase [Thermotoga naphthophila RKU-10]
Length = 132
Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 53/116 (45%), Positives = 79/116 (68%), Gaps = 8/116 (6%)
Query: 12 LDPIEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTA 71
+DP + L ++++AR AY YS +VGAALL + I+TG NVEN+SYG+T+CAE+ A
Sbjct: 2 VDP--EKLVKMALEARKKAYAKYSGFRVGAALLTKSGKIYTGVNVENSSYGLTVCAERVA 59
Query: 72 ISKAISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSD 127
+ KA+SEG+ +F IA+++ PD +PCG+CRQV+ EFS D+ V++ D
Sbjct: 60 VFKAVSEGEREFVAIAIASDSPDKT---APCGACRQVLYEFSD---DLDVIMADRD 109
>gi|357606350|gb|EHJ65031.1| cytidine deaminase [Danaus plexippus]
Length = 152
Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 54/126 (42%), Positives = 83/126 (65%), Gaps = 3/126 (2%)
Query: 1 MVGHDIMEFSALDPIEQNLANLSIQARDNAYCPYSKLQVGAALLCQDD-TIFTGCNVENA 59
M +DI++FS+L + L + R AYCPYS VGAA+L ++D ++TGCN+E++
Sbjct: 1 MEQYDIVDFSSLGETAKQLIQEAAHIRQRAYCPYSNFAVGAAILTEEDERMYTGCNIESS 60
Query: 60 SYGMTICAEKTAISKAISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDI 119
+ TICAE+ A+ +A+ +G TKFK +AV A ++ F +PCG CRQV++EF S DI
Sbjct: 61 TLTPTICAERAAVPRAVCDGYTKFKMVAVVAHQKET--FTAPCGVCRQVLSEFRSSDGDI 118
Query: 120 QVLIVK 125
++ + K
Sbjct: 119 EIYLSK 124
>gi|229174975|ref|ZP_04302495.1| Cytidine deaminase [Bacillus cereus MM3]
gi|423400852|ref|ZP_17378025.1| cytidine deaminase [Bacillus cereus BAG2X1-2]
gi|423457450|ref|ZP_17434247.1| cytidine deaminase [Bacillus cereus BAG5X2-1]
gi|423478443|ref|ZP_17455158.1| cytidine deaminase [Bacillus cereus BAG6X1-1]
gi|228608643|gb|EEK65945.1| Cytidine deaminase [Bacillus cereus MM3]
gi|401147834|gb|EJQ55327.1| cytidine deaminase [Bacillus cereus BAG5X2-1]
gi|401653842|gb|EJS71385.1| cytidine deaminase [Bacillus cereus BAG2X1-2]
gi|402428605|gb|EJV60702.1| cytidine deaminase [Bacillus cereus BAG6X1-1]
Length = 132
Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 55/96 (57%), Positives = 68/96 (70%), Gaps = 3/96 (3%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
+ L +I+AR AY PYSK QVGAALL QD ++ GCNVENASYG+ CAE+TA+ KAI
Sbjct: 4 KQLIQEAIEARKQAYVPYSKFQVGAALLTQDGKVYRGCNVENASYGLCNCAERTALFKAI 63
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEF 112
SEG +F IAV A D+ + V PCG+CRQV+ E
Sbjct: 64 SEGDKEFVAIAVVA---DTKRPVPPCGACRQVMVEL 96
>gi|148269226|ref|YP_001243686.1| cytidine deaminase [Thermotoga petrophila RKU-1]
gi|147734770|gb|ABQ46110.1| cytidine deaminase [Thermotoga petrophila RKU-1]
Length = 132
Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 54/116 (46%), Positives = 80/116 (68%), Gaps = 8/116 (6%)
Query: 12 LDPIEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTA 71
+DP + L ++++AR AY YS +VGAALL + I+TG NVEN+SYG+TICAE+ A
Sbjct: 2 VDP--EKLVKMALEARKKAYAKYSGFRVGAALLAKSGKIYTGVNVENSSYGLTICAERVA 59
Query: 72 ISKAISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSD 127
+ KA+SEG+ +F IA+++ DS+ +PCG+CRQV+ EFS D+ V++ D
Sbjct: 60 VFKAVSEGEREFVAIAIAS---DSSDKTAPCGACRQVLYEFSD---DLDVIMADRD 109
>gi|432859973|ref|XP_004069328.1| PREDICTED: cytidine deaminase-like [Oryzias latipes]
Length = 189
Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 56/114 (49%), Positives = 74/114 (64%), Gaps = 5/114 (4%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
Q L S +A+ AYCPYS+ +VGAALL D+ +FTGCNVENA Y + +CAE+ A++KA+
Sbjct: 51 QRLIFQSQEAKKKAYCPYSQFRVGAALLTIDNRVFTGCNVENACYNLGMCAERNAMAKAV 110
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQ 130
SEG FK IAV++ + D FV PCG CRQ + EF + D V + D S
Sbjct: 111 SEGHRNFKAIAVASDVRD--HFVFPCGGCRQFMREFGT---DWDVYLSHPDGSH 159
>gi|154686790|ref|YP_001421951.1| hypothetical protein RBAM_023600 [Bacillus amyloliquefaciens FZB42]
gi|375363062|ref|YP_005131101.1| cytidine deaminase [Bacillus amyloliquefaciens subsp. plantarum CAU
B946]
gi|384266140|ref|YP_005421847.1| cytidine deaminase [Bacillus amyloliquefaciens subsp. plantarum YAU
B9601-Y2]
gi|385265528|ref|ZP_10043615.1| Cytidine and deoxycytidylate deaminase zinc-binding region
[Bacillus sp. 5B6]
gi|387899163|ref|YP_006329459.1| cytidine deaminase [Bacillus amyloliquefaciens Y2]
gi|394992071|ref|ZP_10384864.1| cytidine deaminase [Bacillus sp. 916]
gi|421730952|ref|ZP_16170078.1| cytidine/deoxycytidine deaminase [Bacillus amyloliquefaciens subsp.
plantarum M27]
gi|429505938|ref|YP_007187122.1| cytidine/deoxycytidine deaminase [Bacillus amyloliquefaciens subsp.
plantarum AS43.3]
gi|451346264|ref|YP_007444895.1| cytidine/deoxycytidine deaminase [Bacillus amyloliquefaciens IT-45]
gi|452856294|ref|YP_007497977.1| cytidine/deoxycytidine deaminase [Bacillus amyloliquefaciens subsp.
plantarum UCMB5036]
gi|154352641|gb|ABS74720.1| Cdd [Bacillus amyloliquefaciens FZB42]
gi|371569056|emb|CCF05906.1| cytidine deaminase [Bacillus amyloliquefaciens subsp. plantarum CAU
B946]
gi|380499493|emb|CCG50531.1| cytidine deaminase [Bacillus amyloliquefaciens subsp. plantarum YAU
B9601-Y2]
gi|385150024|gb|EIF13961.1| Cytidine and deoxycytidylate deaminase zinc-binding region
[Bacillus sp. 5B6]
gi|387173273|gb|AFJ62734.1| cytidine deaminase [Bacillus amyloliquefaciens Y2]
gi|393807087|gb|EJD68413.1| cytidine deaminase [Bacillus sp. 916]
gi|407075106|gb|EKE48093.1| cytidine/deoxycytidine deaminase [Bacillus amyloliquefaciens subsp.
plantarum M27]
gi|429487528|gb|AFZ91452.1| cytidine/deoxycytidine deaminase [Bacillus amyloliquefaciens subsp.
plantarum AS43.3]
gi|449850022|gb|AGF27014.1| cytidine/deoxycytidine deaminase [Bacillus amyloliquefaciens IT-45]
gi|452080554|emb|CCP22317.1| cytidine/deoxycytidine deaminase [Bacillus amyloliquefaciens subsp.
plantarum UCMB5036]
Length = 136
Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 54/98 (55%), Positives = 70/98 (71%), Gaps = 3/98 (3%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
Q L +++ARD AY PYS +VGAALL +D ++ GCN+ENA+Y M CAE+TAI KA+
Sbjct: 4 QELIAEALKARDTAYVPYSNFRVGAALLTKDGKVYRGCNIENAAYSMCNCAERTAIFKAV 63
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSS 114
SEG T+F +AV+A P VSPCG+CRQVI+E S
Sbjct: 64 SEGDTEFAMLAVAADTPGP---VSPCGACRQVISELCS 98
>gi|335030509|ref|ZP_08523998.1| cytidine deaminase [Streptococcus infantis SK1076]
gi|385259911|ref|ZP_10038067.1| cytidine deaminase [Streptococcus sp. SK140]
gi|334266048|gb|EGL84535.1| cytidine deaminase [Streptococcus infantis SK1076]
gi|385192948|gb|EIF40337.1| cytidine deaminase [Streptococcus sp. SK140]
Length = 129
Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 52/116 (44%), Positives = 77/116 (66%), Gaps = 5/116 (4%)
Query: 18 NLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAIS 77
L +L+I+ AY PYS +GA L+ +D +I+TG N+ENASY +T C E+TAI KA+S
Sbjct: 5 ELIDLAIETSKKAYVPYSHFPIGAVLVAKDGSIYTGVNIENASYPLTNCGERTAIFKAVS 64
Query: 78 EGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQVGL 133
EGQ +F + V ++ K +SPCG+CRQV+ EF P D++V +V D++ V +
Sbjct: 65 EGQREFSELIVYG---ETEKPISPCGACRQVMVEFFKP--DLKVTLVAKDKTTVEM 115
>gi|359414298|ref|ZP_09206763.1| cytidine deaminase [Clostridium sp. DL-VIII]
gi|357173182|gb|EHJ01357.1| cytidine deaminase [Clostridium sp. DL-VIII]
Length = 133
Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 53/113 (46%), Positives = 75/113 (66%), Gaps = 5/113 (4%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
+ L +++ R+ AY PYSK +VGAA+L + I+ GCN+ENAS+G T CAE+T I K I
Sbjct: 4 ERLIKTALEYRNRAYSPYSKFKVGAAVLFESGKIYGGCNIENASFGATNCAERTGIFKGI 63
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRS 129
SEG+TK K IAV L + + PCG CRQVI EF D++++I K+++
Sbjct: 64 SEGETKIKAIAVVGSLEE---YTYPCGICRQVIVEFGDE--DVKIIIAKNEKE 111
>gi|228477558|ref|ZP_04062191.1| cytidine deaminase [Streptococcus salivarius SK126]
gi|228250702|gb|EEK09900.1| cytidine deaminase [Streptococcus salivarius SK126]
Length = 132
Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 54/108 (50%), Positives = 77/108 (71%), Gaps = 5/108 (4%)
Query: 26 ARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQTKFKR 85
A +NAY PYSK +VGAAL+ ++ IF GCN+ENAS+G+T CAE+TAI KA+SEG F+
Sbjct: 16 AAENAYVPYSKFRVGAALITKNGEIFQGCNIENASFGLTNCAERTAIFKAVSEGHRDFEC 75
Query: 86 IAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQVGL 133
+AV D+ + +SPCG+CRQV+ EF D +V+++ D+S V +
Sbjct: 76 LAVYG---DTKEPISPCGACRQVMVEFFKS--DSKVILIAEDKSTVEM 118
>gi|312863675|ref|ZP_07723913.1| cytidine deaminase [Streptococcus vestibularis F0396]
gi|311101211|gb|EFQ59416.1| cytidine deaminase [Streptococcus vestibularis F0396]
Length = 132
Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 54/108 (50%), Positives = 77/108 (71%), Gaps = 5/108 (4%)
Query: 26 ARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQTKFKR 85
A +NAY PYSK +VGAAL+ ++ IF GCN+ENAS+G+T CAE+TAI KA+SEG F+
Sbjct: 16 AAENAYVPYSKFRVGAALITKNGEIFQGCNIENASFGLTNCAERTAIFKAVSEGYCDFEY 75
Query: 86 IAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQVGL 133
+AV D+ + +SPCG+CRQV+ EF D +V+++ D+S V +
Sbjct: 76 LAVYG---DTKEPISPCGACRQVMVEFFES--DSKVILIAKDKSTVEM 118
>gi|195114350|ref|XP_002001730.1| GI17010 [Drosophila mojavensis]
gi|193912305|gb|EDW11172.1| GI17010 [Drosophila mojavensis]
Length = 173
Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 61/131 (46%), Positives = 80/131 (61%), Gaps = 5/131 (3%)
Query: 2 VGHDIMEFSALDPIEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDT--IFTGCNVENA 59
V I+ + LD Q L + Q R AY PYS +VGAA +D+ +FTGCNVENA
Sbjct: 13 VKETILPYGKLDATAQELLRAAHQVRQRAYAPYSDFKVGAAFRATEDSQQVFTGCNVENA 72
Query: 60 SYGMTICAEKTAISKAISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDI 119
++ T CAE+TAI+KAISEG +F AV A P N FVSPCG CRQ I EF+ D+
Sbjct: 73 AFTPTSCAERTAIAKAISEGYRQFSSGAVVAYKP--NVFVSPCGVCRQFIREFAG-NTDM 129
Query: 120 QVLIVKSDRSQ 130
+ I +++ +Q
Sbjct: 130 PIYIGQANDAQ 140
>gi|157151580|ref|YP_001450370.1| cytidine deaminase [Streptococcus gordonii str. Challis substr.
CH1]
gi|157076374|gb|ABV11057.1| cytidine deaminase [Streptococcus gordonii str. Challis substr.
CH1]
Length = 129
Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 53/114 (46%), Positives = 77/114 (67%), Gaps = 5/114 (4%)
Query: 18 NLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAIS 77
+L +L+++ NAY PYS +GA L+ +D +FTG NVENAS+G+T C E+TAI KA+S
Sbjct: 5 DLIDLAVETSKNAYVPYSHFPIGAVLVAKDGRLFTGVNVENASFGLTNCGERTAIFKAVS 64
Query: 78 EGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQV 131
EG +F+ + V + K +SPCG+CRQV+AEF D++V +V D+S V
Sbjct: 65 EGALEFEELIVYG---QTEKPISPCGACRQVMAEFFDK--DLKVTLVAKDKSTV 113
>gi|322389696|ref|ZP_08063243.1| cytidine deaminase [Streptococcus parasanguinis ATCC 903]
gi|417917298|ref|ZP_12560860.1| cytidine deaminase [Streptococcus parasanguinis SK236]
gi|321143535|gb|EFX38966.1| cytidine deaminase [Streptococcus parasanguinis ATCC 903]
gi|342830947|gb|EGU65272.1| cytidine deaminase [Streptococcus parasanguinis SK236]
Length = 129
Score = 110 bits (274), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 52/114 (45%), Positives = 75/114 (65%), Gaps = 5/114 (4%)
Query: 18 NLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAIS 77
L +L+++ AY PYS +GA LL +D I+TG N+ENAS+G+T C E+TAI KA+S
Sbjct: 5 ELIDLAVEVSQQAYVPYSHFPIGAVLLTKDGEIYTGVNIENASFGLTNCGERTAIFKAVS 64
Query: 78 EGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQV 131
EG +F+ + + + K +SPCG+CRQV+AEF P D+ V +V D+S V
Sbjct: 65 EGAREFQELIIYG---QTEKPISPCGACRQVMAEFFEP--DLPVTLVSKDKSTV 113
>gi|167630512|ref|YP_001681011.1| cytidine deaminase [Heliobacterium modesticaldum Ice1]
gi|167593252|gb|ABZ85000.1| cytidine deaminase [Heliobacterium modesticaldum Ice1]
Length = 153
Score = 110 bits (274), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 52/110 (47%), Positives = 78/110 (70%), Gaps = 7/110 (6%)
Query: 4 HDIMEFSALDPIEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGM 63
H + +AL+ NL + QAR+ AY PYS+ +VGAALL +D I++GCN+EN +YG+
Sbjct: 8 HPVPSEAALN----NLIEAARQARERAYAPYSRFRVGAALLGEDGVIYSGCNIENGAYGL 63
Query: 64 TICAEKTAISKAISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFS 113
T CAE+TA+ KA+SEG +FK + +++ D+ V+PCG+CRQV+ EF+
Sbjct: 64 TNCAERTALFKAVSEGCRRFKALVLTS---DAPSPVTPCGACRQVLGEFA 110
>gi|52081077|ref|YP_079868.1| cytidine/deoxycytidine deaminase [Bacillus licheniformis DSM 13 =
ATCC 14580]
gi|319644965|ref|ZP_07999198.1| cdd protein [Bacillus sp. BT1B_CT2]
gi|404489959|ref|YP_006714065.1| cytidine deaminase Cdd [Bacillus licheniformis DSM 13 = ATCC 14580]
gi|423683055|ref|ZP_17657894.1| cytidine/deoxycytidine deaminase [Bacillus licheniformis WX-02]
gi|52004288|gb|AAU24230.1| cytidine/deoxycytidine deaminase [Bacillus licheniformis DSM 13 =
ATCC 14580]
gi|52348958|gb|AAU41592.1| cytidine deaminase Cdd [Bacillus licheniformis DSM 13 = ATCC 14580]
gi|317392774|gb|EFV73568.1| cdd protein [Bacillus sp. BT1B_CT2]
gi|383439829|gb|EID47604.1| cytidine/deoxycytidine deaminase [Bacillus licheniformis WX-02]
Length = 136
Score = 110 bits (274), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 53/100 (53%), Positives = 72/100 (72%), Gaps = 3/100 (3%)
Query: 16 EQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKA 75
+Q L +++AR+ AY PYSK +VGAALL +D ++ GCN+ENA+Y + CAE+TA+ KA
Sbjct: 3 KQELIAEALKAREFAYVPYSKFKVGAALLTEDGKVYKGCNIENAAYSLCNCAERTALFKA 62
Query: 76 ISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSP 115
SEG+ FK +AV+A P VSPCG+CRQVI+E SP
Sbjct: 63 YSEGEKSFKMLAVAADTPGP---VSPCGACRQVISELCSP 99
>gi|340398663|ref|YP_004727688.1| cytidine deaminase [Streptococcus salivarius CCHSS3]
gi|338742656|emb|CCB93161.1| cytidine deaminase (Cytidine aminohydrolase) (CDA) [Streptococcus
salivarius CCHSS3]
Length = 132
Score = 110 bits (274), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 54/118 (45%), Positives = 83/118 (70%), Gaps = 5/118 (4%)
Query: 16 EQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKA 75
++ + ++ +A +NAY PYS+ +VGAALL ++ IF GCN+ENAS+G+T CAE+TAI KA
Sbjct: 6 KEKVIKVAQEAAENAYVPYSQFRVGAALLTKNGRIFQGCNIENASFGLTNCAERTAIFKA 65
Query: 76 ISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQVGL 133
+SEG F+ +AV D+ + +SPCG+CRQV+ EF D +V+++ D+S V +
Sbjct: 66 VSEGYRDFECLAVYG---DTKEPISPCGACRQVMVEFLKS--DSKVILIAEDKSTVEM 118
>gi|329767557|ref|ZP_08259079.1| hypothetical protein HMPREF0428_00776 [Gemella haemolysans M341]
gi|328835788|gb|EGF85512.1| hypothetical protein HMPREF0428_00776 [Gemella haemolysans M341]
Length = 430
Score = 110 bits (274), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 56/109 (51%), Positives = 73/109 (66%), Gaps = 3/109 (2%)
Query: 13 DPIEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAI 72
+ I Q L +I+A AY PYS +VGAA+L + I+TGCN+ENASY T CAE+TAI
Sbjct: 293 EDINQTLVEAAIEATKFAYVPYSNFKVGAAILADNGKIYTGCNIENASYSPTNCAERTAI 352
Query: 73 SKAISEGQTKFKRIAVSAILPDSN--KFVSPCGSCRQVIAEFSSPACDI 119
KA+SEG TKFK+IAV P+ N + PCG CRQVI+EF+ ++
Sbjct: 353 FKAVSEGVTKFKKIAVVG-GPNGNLENYCPPCGVCRQVISEFADEEFEL 400
>gi|229086870|ref|ZP_04219030.1| Cytidine deaminase [Bacillus cereus Rock3-44]
gi|228696445|gb|EEL49270.1| Cytidine deaminase [Bacillus cereus Rock3-44]
Length = 132
Score = 110 bits (274), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 55/96 (57%), Positives = 68/96 (70%), Gaps = 3/96 (3%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
+ L +I+AR AY PYSK QVGAALL +D ++ GCNVENASYG+ CAE+TA+ KAI
Sbjct: 4 KELIQEAIEARKQAYVPYSKFQVGAALLTEDGKVYRGCNVENASYGLCNCAERTALFKAI 63
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEF 112
SEG F IAV A D+N+ V PCG+CRQV+ E
Sbjct: 64 SEGDKAFVAIAVVA---DTNRPVPPCGACRQVMIEL 96
>gi|405952956|gb|EKC20701.1| Cytidine deaminase, partial [Crassostrea gigas]
Length = 130
Score = 110 bits (274), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 53/111 (47%), Positives = 75/111 (67%), Gaps = 5/111 (4%)
Query: 19 LANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISE 78
L +++ +D AYCPYS VGAA+L + IFTG NVENASYG+ +CAE+ AI+ A+S+
Sbjct: 1 LVKAAVEVKDKAYCPYSNFHVGAAVLTSSNQIFTGVNVENASYGLCVCAERVAITNAVSQ 60
Query: 79 GQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRS 129
G + K +AV + DS F +PCG+CRQV+AEF+ D+ +VK D +
Sbjct: 61 GHRELKAMAVCCDIKDS--FKAPCGACRQVVAEFN---LDMDYYMVKPDYT 106
>gi|350269009|ref|YP_004880317.1| cytidine deaminase [Oscillibacter valericigenes Sjm18-20]
gi|348593851|dbj|BAK97811.1| cytidine deaminase [Oscillibacter valericigenes Sjm18-20]
Length = 129
Score = 109 bits (273), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 52/97 (53%), Positives = 65/97 (67%), Gaps = 3/97 (3%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
+ L +I+ D AYCPYS VGAAL C D T+FTGCN+ENA+Y + ICAE+TA+SKAI
Sbjct: 4 EELKAAAIRMLDRAYCPYSHFPVGAALECADGTVFTGCNIENAAYSVGICAERTAMSKAI 63
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFS 113
SEG F RI ++ S + PCG CRQ + EFS
Sbjct: 64 SEGHRDFARIVIAG---RSEDYCVPCGMCRQFMQEFS 97
>gi|195978062|ref|YP_002123306.1| cytidine deaminase [Streptococcus equi subsp. zooepidemicus
MGCS10565]
gi|225868607|ref|YP_002744555.1| cytidine deaminase [Streptococcus equi subsp. zooepidemicus]
gi|414563951|ref|YP_006042912.1| cytidine deaminase [Streptococcus equi subsp. zooepidemicus ATCC
35246]
gi|195974767|gb|ACG62293.1| cytidine deaminase Cdd [Streptococcus equi subsp. zooepidemicus
MGCS10565]
gi|225701883|emb|CAW99368.1| cytidine deaminase [Streptococcus equi subsp. zooepidemicus]
gi|338847016|gb|AEJ25228.1| cytidine deaminase [Streptococcus equi subsp. zooepidemicus ATCC
35246]
Length = 129
Score = 109 bits (273), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 54/112 (48%), Positives = 76/112 (67%), Gaps = 4/112 (3%)
Query: 18 NLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAIS 77
+L +L+I+A AY PYS +GAAL +D TI+TGCN+ENAS+G+T C E+TAI KA+S
Sbjct: 5 DLVSLAIEASKRAYVPYSHFPIGAALKTKDGTIYTGCNIENASFGLTNCGERTAIFKAVS 64
Query: 78 EGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRS 129
EG + I AI ++++ +SPCG+CRQV+AEF + LI K R+
Sbjct: 65 EGHQQLLEI---AIYGETDEPISPCGACRQVMAEFFEATAPV-TLIAKDGRT 112
>gi|419707814|ref|ZP_14235291.1| Cytidine deaminase [Streptococcus salivarius PS4]
gi|383282458|gb|EIC80445.1| Cytidine deaminase [Streptococcus salivarius PS4]
Length = 132
Score = 109 bits (273), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 55/109 (50%), Positives = 76/109 (69%), Gaps = 5/109 (4%)
Query: 25 QARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQTKFK 84
+A +NAY PYS+ +VGAALL +D IF GCN+ENAS+G+T CAE+TAI KA+SEG F+
Sbjct: 15 EAAENAYVPYSRFRVGAALLTKDGQIFKGCNIENASFGLTNCAERTAIFKAVSEGYRDFE 74
Query: 85 RIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQVGL 133
+AV D+ +SPCG+CRQV+ EF D +V+++ D S V +
Sbjct: 75 CLAVYG---DTKDPISPCGACRQVMVEFLKS--DSKVILIAEDNSTVEM 118
>gi|387879718|ref|YP_006310021.1| Cytidine deaminase [Streptococcus parasanguinis FW213]
gi|386793169|gb|AFJ26204.1| Cytidine deaminase, putative [Streptococcus parasanguinis FW213]
Length = 129
Score = 109 bits (273), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 52/113 (46%), Positives = 74/113 (65%), Gaps = 5/113 (4%)
Query: 19 LANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISE 78
L NL+++ + AY PYS +GA LL +D I+TG N+ENAS+G+T C E+TAI KA+SE
Sbjct: 6 LINLAVEVSNQAYVPYSHFPIGAVLLTKDGEIYTGVNIENASFGLTNCGERTAIFKAVSE 65
Query: 79 GQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQV 131
G F+ + + + +SPCG+CRQV+AEF P D+ V +V D+S V
Sbjct: 66 GARDFQELIIYG---QTENPISPCGACRQVMAEFFEP--DLPVTLVSKDKSTV 113
>gi|308174318|ref|YP_003921023.1| cytidine/deoxycytidine deaminase [Bacillus amyloliquefaciens DSM 7]
gi|384160177|ref|YP_005542250.1| cytidine deaminase [Bacillus amyloliquefaciens TA208]
gi|384165107|ref|YP_005546486.1| cytidine/deoxycytidine deaminase [Bacillus amyloliquefaciens LL3]
gi|384169247|ref|YP_005550625.1| cytidine deaminase [Bacillus amyloliquefaciens XH7]
gi|307607182|emb|CBI43553.1| cytidine/deoxycytidine deaminase [Bacillus amyloliquefaciens DSM 7]
gi|328554265|gb|AEB24757.1| cytidine deaminase [Bacillus amyloliquefaciens TA208]
gi|328912662|gb|AEB64258.1| cytidine/deoxycytidine deaminase [Bacillus amyloliquefaciens LL3]
gi|341828526|gb|AEK89777.1| cytidine deaminase [Bacillus amyloliquefaciens XH7]
Length = 136
Score = 109 bits (273), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 56/108 (51%), Positives = 74/108 (68%), Gaps = 7/108 (6%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
Q L +++ARD AY PYS +VGAALL +D ++ GCN+ENA+Y M CAE+TAI KA+
Sbjct: 4 QELIAEALKARDTAYVPYSNFRVGAALLTKDGKVYRGCNIENAAYSMCNCAERTAIFKAV 63
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIV 124
SEG T+F +AV+A P VSPCG+CRQVI+E C +L+V
Sbjct: 64 SEGDTEFVMLAVAADTPGP---VSPCGACRQVISEL----CSKDMLVV 104
>gi|424780783|ref|ZP_18207653.1| Cytidine deaminase [Catellicoccus marimammalium M35/04/3]
gi|422842708|gb|EKU27157.1| Cytidine deaminase [Catellicoccus marimammalium M35/04/3]
Length = 130
Score = 109 bits (273), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 53/115 (46%), Positives = 79/115 (68%), Gaps = 5/115 (4%)
Query: 16 EQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKA 75
++ + +I A AY PYS+ VGA L+ +D T++TGCN+ENAS+G+T CAE+TAI KA
Sbjct: 4 KEEWIDAAITASQKAYIPYSQFPVGACLVAEDGTLYTGCNIENASFGLTNCAERTAIFKA 63
Query: 76 ISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQ 130
+SEG+ KF+ + V + +SPCG+CRQV+AEF D+ V ++ +DRS+
Sbjct: 64 VSEGEKKFQHLVVYG---QTKAPISPCGACRQVMAEFCD--ADMPVTLIGNDRSR 113
>gi|322385395|ref|ZP_08059040.1| cytidine deaminase [Streptococcus cristatus ATCC 51100]
gi|417921720|ref|ZP_12565210.1| cytidine deaminase [Streptococcus cristatus ATCC 51100]
gi|321270654|gb|EFX53569.1| cytidine deaminase [Streptococcus cristatus ATCC 51100]
gi|342833605|gb|EGU67885.1| cytidine deaminase [Streptococcus cristatus ATCC 51100]
Length = 129
Score = 109 bits (273), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 54/114 (47%), Positives = 77/114 (67%), Gaps = 5/114 (4%)
Query: 18 NLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAIS 77
NL +L ++ NAY PYS VGA L+ ++ +FTG N+ENAS+G+T CAE+TAI KA+S
Sbjct: 5 NLIDLVVETTKNAYVPYSHFPVGAVLVAKNGQVFTGVNIENASFGLTNCAERTAIFKAVS 64
Query: 78 EGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQV 131
EG F+ + V ++ K +SPCG+CRQV+AEF + D+ V +V D+S V
Sbjct: 65 EGFLDFEELIVYG---ETEKPISPCGACRQVMAEFFNQ--DLPVTLVAKDKSTV 113
>gi|421452579|ref|ZP_15901940.1| Cytidine deaminase [Streptococcus salivarius K12]
gi|400183010|gb|EJO17272.1| Cytidine deaminase [Streptococcus salivarius K12]
Length = 132
Score = 109 bits (273), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 55/109 (50%), Positives = 76/109 (69%), Gaps = 5/109 (4%)
Query: 25 QARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQTKFK 84
+A +NAY PYS+ +VGAALL +D IF GCN+ENAS+G+T CAE+TAI KA+SEG F+
Sbjct: 15 EAAENAYVPYSRFRVGAALLTKDGQIFQGCNIENASFGLTNCAERTAIFKAVSEGYRDFE 74
Query: 85 RIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQVGL 133
+AV D+ +SPCG+CRQV+ EF D +V+++ D S V +
Sbjct: 75 CLAVYG---DTKDPISPCGACRQVMVEFLKS--DSKVILIAEDNSTVEM 118
>gi|66805551|ref|XP_636497.1| cytidine deaminase [Dictyostelium discoideum AX4]
gi|74852411|sp|Q54I82.1|CDD_DICDI RecName: Full=Probable cytidine deaminase; AltName: Full=Cytidine
aminohydrolase
gi|60464874|gb|EAL62990.1| cytidine deaminase [Dictyostelium discoideum AX4]
Length = 147
Score = 109 bits (273), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 55/100 (55%), Positives = 71/100 (71%), Gaps = 6/100 (6%)
Query: 30 AYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQTKFKRIAVS 89
A+CPYS ++GAALL IFTG NVEN+SYG+TICAE+TA +KA+SEG FK I V+
Sbjct: 20 AHCPYSHFRIGAALLTSCGKIFTGVNVENSSYGLTICAERTAYTKAVSEGYKSFKGIVVA 79
Query: 90 AILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRS 129
+ L D +F++PCG+CRQ EF D +V+ VK DRS
Sbjct: 80 SDLKD--RFITPCGACRQFGVEFG----DFEVVCVKPDRS 113
>gi|19920920|ref|NP_609196.1| CG8353, isoform A [Drosophila melanogaster]
gi|442626749|ref|NP_001260233.1| CG8353, isoform B [Drosophila melanogaster]
gi|7297362|gb|AAF52622.1| CG8353, isoform A [Drosophila melanogaster]
gi|17944360|gb|AAL48072.1| RE70243p [Drosophila melanogaster]
gi|220948758|gb|ACL86922.1| CG8353-PA [synthetic construct]
gi|220958248|gb|ACL91667.1| CG8353-PA [synthetic construct]
gi|440213541|gb|AGB92769.1| CG8353, isoform B [Drosophila melanogaster]
Length = 170
Score = 109 bits (273), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 58/124 (46%), Positives = 78/124 (62%), Gaps = 5/124 (4%)
Query: 4 HDIMEFSALDPIEQNLANLSIQARDNAYCPYSKLQVGAALLCQ-DDTIFTGCNVENASYG 62
+++ F +LDP Q L + Q R AY PYS +VGAA + D IFTGCNVENA++
Sbjct: 15 EEVVTFGSLDPSVQELLTAAFQVRQRAYVPYSGFKVGAAFRAKVDGKIFTGCNVENAAFT 74
Query: 63 MTICAEKTAISKAISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVL 122
CAE+TAI+KA+SEG T+F AV A P N F +PCG CRQ I EF++ DI +
Sbjct: 75 PGSCAERTAIAKAVSEGATEFLAGAVLAYEP--NVFTTPCGVCRQFIREFAN--ADIPIY 130
Query: 123 IVKS 126
+ ++
Sbjct: 131 VAQA 134
>gi|15643609|ref|NP_228655.1| cytidine/deoxycytidine deaminase [Thermotoga maritima MSB8]
gi|403252587|ref|ZP_10918896.1| cytidine deaminase [Thermotoga sp. EMP]
gi|418044984|ref|ZP_12683080.1| cytidine deaminase [Thermotoga maritima MSB8]
gi|4981379|gb|AAD35928.1|AE001751_8 cytidine/deoxycytidine deaminase [Thermotoga maritima MSB8]
gi|351678066|gb|EHA61213.1| cytidine deaminase [Thermotoga maritima MSB8]
gi|402812077|gb|EJX26557.1| cytidine deaminase [Thermotoga sp. EMP]
Length = 132
Score = 109 bits (273), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 51/111 (45%), Positives = 76/111 (68%), Gaps = 6/111 (5%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
+ L ++++AR AY YS +VGAALL + I+TG NVEN+SYG+T+CAE+ A+ KA+
Sbjct: 5 EKLVKMALEARKKAYAKYSGFRVGAALLTKSGKIYTGVNVENSSYGLTVCAERVAVFKAV 64
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSD 127
SEG+ +F IA+++ PD +PCG+CRQV+ EFS D+ V++ D
Sbjct: 65 SEGEREFVAIAIASDSPDKT---APCGACRQVLYEFSD---DLDVIMADRD 109
>gi|322388052|ref|ZP_08061658.1| cytidine deaminase [Streptococcus infantis ATCC 700779]
gi|419843190|ref|ZP_14366513.1| cytidine deaminase [Streptococcus infantis ATCC 700779]
gi|321141073|gb|EFX36572.1| cytidine deaminase [Streptococcus infantis ATCC 700779]
gi|385703103|gb|EIG40230.1| cytidine deaminase [Streptococcus infantis ATCC 700779]
Length = 129
Score = 109 bits (273), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 54/116 (46%), Positives = 74/116 (63%), Gaps = 5/116 (4%)
Query: 18 NLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAIS 77
L L+I+ AY PYS +GA L+ +D +I+TG N+ENASY +T C E+TAI KAIS
Sbjct: 5 ELIELAIETSKKAYVPYSHFPIGAVLVAKDGSIYTGVNIENASYPLTNCGERTAIFKAIS 64
Query: 78 EGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQVGL 133
EGQ F + V + K +SPCG+CRQV+ EF P D++V +V D+S V +
Sbjct: 65 EGQRDFSELIVYG---QTEKPISPCGACRQVMVEFFKP--DLKVTLVAKDKSTVEM 115
>gi|241888489|ref|ZP_04775798.1| hydrolase [Gemella haemolysans ATCC 10379]
gi|241864832|gb|EER69205.1| hydrolase [Gemella haemolysans ATCC 10379]
Length = 430
Score = 109 bits (273), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 57/119 (47%), Positives = 80/119 (67%), Gaps = 5/119 (4%)
Query: 13 DPIEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAI 72
+ I + L +I+A AY PYS +VGAA+L ++ I+TGCN+ENASY T CAE+TAI
Sbjct: 293 EDINEVLVKAAIEATKYAYVPYSNFKVGAAILAENGKIYTGCNIENASYSPTNCAERTAI 352
Query: 73 SKAISEGQTKFKRIAVSAILPDSN--KFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRS 129
KA+SEG TKFK+IAV P+ N + PCG CRQVI+EF+ D ++++ S+ +
Sbjct: 353 FKAVSEGVTKFKKIAVVG-GPNGNLENYCPPCGVCRQVISEFADK--DFELILGTSENT 408
>gi|229109383|ref|ZP_04238979.1| Cytidine deaminase [Bacillus cereus Rock1-15]
gi|228674073|gb|EEL29321.1| Cytidine deaminase [Bacillus cereus Rock1-15]
Length = 131
Score = 109 bits (273), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 55/118 (46%), Positives = 77/118 (65%), Gaps = 10/118 (8%)
Query: 29 NAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQTKFKRIAV 88
AY PYSK VGAAL+ ++ I+TGCN+ENASYG+ CAE+TAI KA+SEG+ F + +
Sbjct: 16 KAYIPYSKFPVGAALVTKEGKIYTGCNIENASYGLCNCAERTAIFKAVSEGERDFSYLVI 75
Query: 89 SAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQV-------GLITIDGM 139
+ ++++ +SPCG+CRQVIAEF P + + VK D +V G TID +
Sbjct: 76 TG---ETDEPISPCGACRQVIAEFCDPKMPVLLTNVKGDEKEVTVEQLLPGAFTIDDL 130
>gi|116627671|ref|YP_820290.1| cytidine deaminase [Streptococcus thermophilus LMD-9]
gi|386086483|ref|YP_006002357.1| Cytidine deaminase, putative [Streptococcus thermophilus ND03]
gi|387909855|ref|YP_006340161.1| cytidine deaminase [Streptococcus thermophilus MN-ZLW-002]
gi|445375488|ref|ZP_21426533.1| cytidine deaminase [Streptococcus thermophilus MTCC 5460]
gi|445390069|ref|ZP_21428254.1| cytidine deaminase [Streptococcus thermophilus MTCC 5461]
gi|116100948|gb|ABJ66094.1| cytidine deaminase [Streptococcus thermophilus LMD-9]
gi|312278196|gb|ADQ62853.1| Cytidine deaminase, putative [Streptococcus thermophilus ND03]
gi|387574790|gb|AFJ83496.1| cytidine deaminase [Streptococcus thermophilus MN-ZLW-002]
gi|444750156|gb|ELW74992.1| cytidine deaminase [Streptococcus thermophilus MTCC 5461]
gi|444750320|gb|ELW75143.1| cytidine deaminase [Streptococcus thermophilus MTCC 5460]
Length = 132
Score = 109 bits (272), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 53/103 (51%), Positives = 72/103 (69%), Gaps = 5/103 (4%)
Query: 29 NAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQTKFKRIAV 88
NAY PYS +VGAALL D ++ GCN+ENAS+G+T CAE+TAI KA+SEG F+ I V
Sbjct: 19 NAYVPYSHFRVGAALLTNDGQMYKGCNIENASFGLTNCAERTAIFKAVSEGHRDFEMIVV 78
Query: 89 SAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQV 131
D+ + +SPCG+CRQV+AEF D +V+++ D+S V
Sbjct: 79 YG---DTEQPISPCGACRQVMAEFFKQ--DSKVILIAEDKSTV 116
>gi|116666976|pdb|2D30|A Chain A, Crystal Structure Of Cytidine Deaminase Cdd-2 (Ba4525)
From Bacillus Anthracis At 2.40a Resolution
gi|116666977|pdb|2D30|B Chain B, Crystal Structure Of Cytidine Deaminase Cdd-2 (Ba4525)
From Bacillus Anthracis At 2.40a Resolution
Length = 141
Score = 109 bits (272), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 53/96 (55%), Positives = 68/96 (70%), Gaps = 3/96 (3%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
+ L +I+AR AY PYSK QVGAALL QD ++ GCNVENASYG+ CAE+TA+ KA+
Sbjct: 13 KQLIQEAIEARKQAYVPYSKFQVGAALLTQDGKVYRGCNVENASYGLCNCAERTALFKAV 72
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEF 112
SEG +F I AI+ D+ + V PCG+CRQV+ E
Sbjct: 73 SEGDKEFVAI---AIVADTKRPVPPCGACRQVMVEL 105
>gi|30264371|ref|NP_846748.1| cytidine deaminase [Bacillus anthracis str. Ames]
gi|47529822|ref|YP_021171.1| cytidine deaminase [Bacillus anthracis str. 'Ames Ancestor']
gi|47567865|ref|ZP_00238573.1| cytidine deaminase [Bacillus cereus G9241]
gi|49187196|ref|YP_030448.1| cytidine deaminase [Bacillus anthracis str. Sterne]
gi|49481312|ref|YP_038356.1| cytidine deaminase [Bacillus thuringiensis serovar konkukian str.
97-27]
gi|52141203|ref|YP_085627.1| cytidine deaminase [Bacillus cereus E33L]
gi|118479470|ref|YP_896621.1| cytidine deaminase [Bacillus thuringiensis str. Al Hakam]
gi|165872057|ref|ZP_02216697.1| cytidine deaminase [Bacillus anthracis str. A0488]
gi|167634650|ref|ZP_02392970.1| cytidine deaminase [Bacillus anthracis str. A0442]
gi|167638499|ref|ZP_02396775.1| cytidine deaminase [Bacillus anthracis str. A0193]
gi|170687458|ref|ZP_02878675.1| cytidine deaminase [Bacillus anthracis str. A0465]
gi|170707393|ref|ZP_02897847.1| cytidine deaminase [Bacillus anthracis str. A0389]
gi|177653250|ref|ZP_02935502.1| cytidine deaminase [Bacillus anthracis str. A0174]
gi|190567033|ref|ZP_03019949.1| cytidine deaminase [Bacillus anthracis str. Tsiankovskii-I]
gi|196034298|ref|ZP_03101707.1| cytidine deaminase [Bacillus cereus W]
gi|196039308|ref|ZP_03106614.1| cytidine deaminase [Bacillus cereus NVH0597-99]
gi|196046381|ref|ZP_03113607.1| cytidine deaminase [Bacillus cereus 03BB108]
gi|218905438|ref|YP_002453272.1| cytidine deaminase [Bacillus cereus AH820]
gi|225866282|ref|YP_002751660.1| cytidine deaminase [Bacillus cereus 03BB102]
gi|227817077|ref|YP_002817086.1| cytidine deaminase [Bacillus anthracis str. CDC 684]
gi|228916933|ref|ZP_04080495.1| Cytidine deaminase [Bacillus thuringiensis serovar pulsiensis BGSC
4CC1]
gi|228929344|ref|ZP_04092369.1| Cytidine deaminase [Bacillus thuringiensis serovar pondicheriensis
BGSC 4BA1]
gi|228935621|ref|ZP_04098436.1| Cytidine deaminase [Bacillus thuringiensis serovar andalousiensis
BGSC 4AW1]
gi|228948014|ref|ZP_04110300.1| Cytidine deaminase [Bacillus thuringiensis serovar monterrey BGSC
4AJ1]
gi|228987551|ref|ZP_04147670.1| Cytidine deaminase [Bacillus thuringiensis serovar tochigiensis
BGSC 4Y1]
gi|229031949|ref|ZP_04187936.1| Cytidine deaminase [Bacillus cereus AH1271]
gi|229093370|ref|ZP_04224477.1| Cytidine deaminase [Bacillus cereus Rock3-42]
gi|229123839|ref|ZP_04253033.1| Cytidine deaminase [Bacillus cereus 95/8201]
gi|229157915|ref|ZP_04285989.1| Cytidine deaminase [Bacillus cereus ATCC 4342]
gi|229186540|ref|ZP_04313702.1| Cytidine deaminase [Bacillus cereus BGSC 6E1]
gi|229601612|ref|YP_002868590.1| cytidine deaminase [Bacillus anthracis str. A0248]
gi|254684058|ref|ZP_05147918.1| cytidine deaminase [Bacillus anthracis str. CNEVA-9066]
gi|254721892|ref|ZP_05183681.1| cytidine deaminase [Bacillus anthracis str. A1055]
gi|254736406|ref|ZP_05194112.1| cytidine deaminase [Bacillus anthracis str. Western North America
USA6153]
gi|254741444|ref|ZP_05199131.1| cytidine deaminase [Bacillus anthracis str. Kruger B]
gi|254750882|ref|ZP_05202921.1| cytidine deaminase [Bacillus anthracis str. Vollum]
gi|254757790|ref|ZP_05209817.1| cytidine deaminase [Bacillus anthracis str. Australia 94]
gi|301055793|ref|YP_003794004.1| cytidine deaminase [Bacillus cereus biovar anthracis str. CI]
gi|376268198|ref|YP_005120910.1| Cytidine deaminase [Bacillus cereus F837/76]
gi|386738190|ref|YP_006211371.1| Cytidine deaminase [Bacillus anthracis str. H9401]
gi|421506556|ref|ZP_15953479.1| cytidine deaminase [Bacillus anthracis str. UR-1]
gi|421638377|ref|ZP_16078973.1| cytidine deaminase [Bacillus anthracis str. BF1]
gi|423549957|ref|ZP_17526284.1| cytidine deaminase [Bacillus cereus ISP3191]
gi|30259029|gb|AAP28234.1| cytidine deaminase [Bacillus anthracis str. Ames]
gi|47504970|gb|AAT33646.1| cytidine deaminase [Bacillus anthracis str. 'Ames Ancestor']
gi|47555542|gb|EAL13885.1| cytidine deaminase [Bacillus cereus G9241]
gi|49181123|gb|AAT56499.1| cytidine deaminase [Bacillus anthracis str. Sterne]
gi|49332868|gb|AAT63514.1| cytidine deaminase [Bacillus thuringiensis serovar konkukian str.
97-27]
gi|51974672|gb|AAU16222.1| cytidine deaminase [Bacillus cereus E33L]
gi|118418695|gb|ABK87114.1| cytidine deaminase [Bacillus thuringiensis str. Al Hakam]
gi|164712188|gb|EDR17725.1| cytidine deaminase [Bacillus anthracis str. A0488]
gi|167513347|gb|EDR88717.1| cytidine deaminase [Bacillus anthracis str. A0193]
gi|167530102|gb|EDR92837.1| cytidine deaminase [Bacillus anthracis str. A0442]
gi|170127637|gb|EDS96510.1| cytidine deaminase [Bacillus anthracis str. A0389]
gi|170668653|gb|EDT19399.1| cytidine deaminase [Bacillus anthracis str. A0465]
gi|172081532|gb|EDT66604.1| cytidine deaminase [Bacillus anthracis str. A0174]
gi|190562024|gb|EDV15993.1| cytidine deaminase [Bacillus anthracis str. Tsiankovskii-I]
gi|195992840|gb|EDX56799.1| cytidine deaminase [Bacillus cereus W]
gi|196022851|gb|EDX61532.1| cytidine deaminase [Bacillus cereus 03BB108]
gi|196029935|gb|EDX68536.1| cytidine deaminase [Bacillus cereus NVH0597-99]
gi|218535246|gb|ACK87644.1| cytidine deaminase [Bacillus cereus AH820]
gi|225785979|gb|ACO26196.1| cytidine deaminase [Bacillus cereus 03BB102]
gi|227003484|gb|ACP13227.1| cytidine deaminase [Bacillus anthracis str. CDC 684]
gi|228596971|gb|EEK54629.1| Cytidine deaminase [Bacillus cereus BGSC 6E1]
gi|228625574|gb|EEK82327.1| Cytidine deaminase [Bacillus cereus ATCC 4342]
gi|228659660|gb|EEL15306.1| Cytidine deaminase [Bacillus cereus 95/8201]
gi|228690026|gb|EEL43827.1| Cytidine deaminase [Bacillus cereus Rock3-42]
gi|228729413|gb|EEL80403.1| Cytidine deaminase [Bacillus cereus AH1271]
gi|228772283|gb|EEM20730.1| Cytidine deaminase [Bacillus thuringiensis serovar tochigiensis
BGSC 4Y1]
gi|228811704|gb|EEM58039.1| Cytidine deaminase [Bacillus thuringiensis serovar monterrey BGSC
4AJ1]
gi|228824061|gb|EEM69878.1| Cytidine deaminase [Bacillus thuringiensis serovar andalousiensis
BGSC 4AW1]
gi|228830358|gb|EEM75970.1| Cytidine deaminase [Bacillus thuringiensis serovar pondicheriensis
BGSC 4BA1]
gi|228842757|gb|EEM87843.1| Cytidine deaminase [Bacillus thuringiensis serovar pulsiensis BGSC
4CC1]
gi|229266020|gb|ACQ47657.1| cytidine deaminase [Bacillus anthracis str. A0248]
gi|300377962|gb|ADK06866.1| cytidine deaminase [Bacillus cereus biovar anthracis str. CI]
gi|364513998|gb|AEW57397.1| Cytidine deaminase [Bacillus cereus F837/76]
gi|384388042|gb|AFH85703.1| Cytidine deaminase [Bacillus anthracis str. H9401]
gi|401189573|gb|EJQ96623.1| cytidine deaminase [Bacillus cereus ISP3191]
gi|401823549|gb|EJT22696.1| cytidine deaminase [Bacillus anthracis str. UR-1]
gi|403394803|gb|EJY92043.1| cytidine deaminase [Bacillus anthracis str. BF1]
Length = 132
Score = 109 bits (272), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 53/96 (55%), Positives = 68/96 (70%), Gaps = 3/96 (3%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
+ L +I+AR AY PYSK QVGAALL QD ++ GCNVENASYG+ CAE+TA+ KA+
Sbjct: 4 KQLIQEAIEARKQAYVPYSKFQVGAALLTQDGKVYRGCNVENASYGLCNCAERTALFKAV 63
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEF 112
SEG +F IA+ A D+ + V PCG+CRQV+ E
Sbjct: 64 SEGDKEFVAIAIVA---DTKRPVPPCGACRQVMVEL 96
>gi|153953549|ref|YP_001394314.1| cytidine deaminase [Clostridium kluyveri DSM 555]
gi|219854171|ref|YP_002471293.1| hypothetical protein CKR_0828 [Clostridium kluyveri NBRC 12016]
gi|146346430|gb|EDK32966.1| Cdd [Clostridium kluyveri DSM 555]
gi|219567895|dbj|BAH05879.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 138
Score = 109 bits (272), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 54/112 (48%), Positives = 78/112 (69%), Gaps = 7/112 (6%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
+ L + ++ A+ AY PYSK +VGAA+L D I+TGCN+EN SYG T CAE+TA+ KA+
Sbjct: 4 KKLISKAVDAKKLAYAPYSKFRVGAAVLTGDGNIYTGCNIENVSYGATNCAERTAVFKAV 63
Query: 77 SEGQTKFKRIAVSAILPDSNK-FVSPCGSCRQVIAEFSSPACDIQVLIVKSD 127
SEG + IA++ SNK + PCG CRQVI+EF+ D++++IVK++
Sbjct: 64 SEGHRDLRAIAIAG----SNKEYTYPCGICRQVISEFARE--DMEIIIVKNE 109
>gi|315222906|ref|ZP_07864785.1| cytidine deaminase [Streptococcus anginosus F0211]
gi|315187856|gb|EFU21592.1| cytidine deaminase [Streptococcus anginosus F0211]
Length = 129
Score = 109 bits (272), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 54/113 (47%), Positives = 77/113 (68%), Gaps = 5/113 (4%)
Query: 19 LANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISE 78
L +L+I+ AY PYS +GA L+ ++ IFTG N+ENAS+G+T C E+TAI KA+SE
Sbjct: 6 LIDLAIETSKKAYVPYSHFPIGAVLVAKNGQIFTGVNIENASFGLTNCGERTAIFKAVSE 65
Query: 79 GQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQV 131
G T F+ + V ++ + VSPCG+CRQV+AEF S D++V +V D+S V
Sbjct: 66 GVTDFEELIVYG---ETEQPVSPCGACRQVMAEFFSK--DLKVTLVAKDKSTV 113
>gi|421858903|ref|ZP_16291153.1| cytidine deaminase [Paenibacillus popilliae ATCC 14706]
gi|410831528|dbj|GAC41590.1| cytidine deaminase [Paenibacillus popilliae ATCC 14706]
Length = 133
Score = 109 bits (272), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 56/113 (49%), Positives = 78/113 (69%), Gaps = 8/113 (7%)
Query: 15 IEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISK 74
+++ + +++AR AY PYS+ QVGAA+L IF GCNVENASYG+T CAE+TA+ K
Sbjct: 1 MKEQVIQEALEARKQAYTPYSRFQVGAAVLA-GGKIFRGCNVENASYGLTNCAERTAVFK 59
Query: 75 AISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSD 127
A+SEG+ KRI A++ D+ V+PCG+CRQV+AEF CD + I S+
Sbjct: 60 AVSEGE---KRIEAIAVVADTEGPVAPCGACRQVLAEF----CDSETRIFLSN 105
>gi|229019525|ref|ZP_04176342.1| Cytidine deaminase [Bacillus cereus AH1273]
gi|229025767|ref|ZP_04182166.1| Cytidine deaminase [Bacillus cereus AH1272]
gi|423389382|ref|ZP_17366608.1| cytidine deaminase [Bacillus cereus BAG1X1-3]
gi|423417774|ref|ZP_17394863.1| cytidine deaminase [Bacillus cereus BAG3X2-1]
gi|228735475|gb|EEL86071.1| Cytidine deaminase [Bacillus cereus AH1272]
gi|228741781|gb|EEL91964.1| Cytidine deaminase [Bacillus cereus AH1273]
gi|401106945|gb|EJQ14902.1| cytidine deaminase [Bacillus cereus BAG3X2-1]
gi|401641473|gb|EJS59190.1| cytidine deaminase [Bacillus cereus BAG1X1-3]
Length = 132
Score = 109 bits (272), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 56/96 (58%), Positives = 67/96 (69%), Gaps = 3/96 (3%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
+ L +I+AR AY PYSK QVGAALL QD I+ GCNVENASYG+ CAE+TA+ KAI
Sbjct: 4 KQLIQEAIEARKQAYVPYSKFQVGAALLTQDGKIYRGCNVENASYGLCNCAERTALFKAI 63
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEF 112
SEG F IAV A D+ + V PCG+CRQV+ E
Sbjct: 64 SEGDKGFVAIAVVA---DTKRPVPPCGACRQVMIEL 96
>gi|421491007|ref|ZP_15938374.1| cytidine deaminase [Streptococcus anginosus SK1138]
gi|400372004|gb|EJP24953.1| cytidine deaminase [Streptococcus anginosus SK1138]
Length = 129
Score = 109 bits (272), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 54/113 (47%), Positives = 77/113 (68%), Gaps = 5/113 (4%)
Query: 19 LANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISE 78
L +L+I+ AY PYS +GA L+ ++ IFTG N+ENAS+G+T C E+TAI KA+SE
Sbjct: 6 LIDLAIETSKKAYVPYSHFPIGAVLVAKNGQIFTGVNIENASFGLTNCGERTAIFKAVSE 65
Query: 79 GQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQV 131
G T F+ + V ++ + VSPCG+CRQV+AEF S D++V +V D+S V
Sbjct: 66 GVTDFEELIVYG---ETEQPVSPCGACRQVMAEFFSK--DLKVTLVAKDKSTV 113
>gi|385262158|ref|ZP_10040273.1| cytidine deaminase [Streptococcus sp. SK643]
gi|385191899|gb|EIF39311.1| cytidine deaminase [Streptococcus sp. SK643]
Length = 129
Score = 109 bits (272), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 54/116 (46%), Positives = 76/116 (65%), Gaps = 5/116 (4%)
Query: 18 NLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAIS 77
L +L+I+ AY PYS VGA L+ +D +I+TG N+ENASY +T C E+TAI KA+S
Sbjct: 5 ELIDLAIETSKKAYVPYSHFPVGAVLVAKDASIYTGVNIENASYSLTNCGERTAIFKAVS 64
Query: 78 EGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQVGL 133
EGQ +F + V + K +SPCG+CRQV+AEF D++V +V D+S V +
Sbjct: 65 EGQREFSELIVYG---QTEKPISPCGACRQVMAEFFEK--DLKVTLVAKDKSTVEM 115
>gi|389739071|gb|EIM80265.1| cytidine deaminase [Stereum hirsutum FP-91666 SS1]
Length = 158
Score = 109 bits (272), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 59/116 (50%), Positives = 79/116 (68%), Gaps = 7/116 (6%)
Query: 14 PIE--QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTA 71
PI+ + L +I+A++ +Y PYSK +VGAALL D +I G N+ENASYG TICAE+TA
Sbjct: 11 PIQDRERLIQAAIEAKEGSYSPYSKFRVGAALLAVDGSIVKGANIENASYGGTICAERTA 70
Query: 72 ISKAISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSD 127
+ KA+SEG F +AV++ D + +SPCG CRQVI EF A + VL+V SD
Sbjct: 71 LVKAVSEGTRSFIALAVTS---DVAQAISPCGICRQVIREFC--ALRMPVLLVPSD 121
>gi|300707127|ref|XP_002995785.1| hypothetical protein NCER_101234 [Nosema ceranae BRL01]
gi|239604999|gb|EEQ82114.1| hypothetical protein NCER_101234 [Nosema ceranae BRL01]
Length = 150
Score = 109 bits (272), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 53/109 (48%), Positives = 72/109 (66%), Gaps = 2/109 (1%)
Query: 19 LANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISE 78
L N + Q R NAYCPYSK VGAA+ IF GCN+EN+ + +ICAE+ AIS+A+S
Sbjct: 20 LINRARQVRKNAYCPYSKFAVGAAVRTASGEIFIGCNIENSCFSPSICAERAAISQAVSA 79
Query: 79 GQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSD 127
G + AV A LP N++V PCG CRQ +AEF++ + DI++ + K D
Sbjct: 80 GHKEIVECAVVAYLP--NEYVYPCGVCRQTLAEFANASKDIKIYLAKPD 126
>gi|429767136|ref|ZP_19299349.1| cytidine deaminase [Clostridium celatum DSM 1785]
gi|429181568|gb|EKY22725.1| cytidine deaminase [Clostridium celatum DSM 1785]
Length = 138
Score = 109 bits (272), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 51/109 (46%), Positives = 76/109 (69%), Gaps = 4/109 (3%)
Query: 23 SIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQTK 82
+++AR+ AYCPYS +VGAA+L +D I+TG N+ENAS+G T CAE+TAI K + EG +
Sbjct: 15 ALEAREKAYCPYSNFKVGAAVLFEDGKIYTGSNIENASFGGTNCAERTAIFKGVHEGNRE 74
Query: 83 FKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQV 131
K +AV + D+N + PCG CRQVIAEF ++ ++I+K++ +
Sbjct: 75 IKAVAV---VGDTNAYTYPCGICRQVIAEFVVDK-NVPIIIIKNENDYI 119
>gi|114051311|ref|NP_001040110.1| cytidine deaminase [Bombyx mori]
gi|87248087|gb|ABD36096.1| cytidine deaminase [Bombyx mori]
Length = 186
Score = 109 bits (272), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 51/126 (40%), Positives = 84/126 (66%), Gaps = 4/126 (3%)
Query: 1 MVGHDIMEFSALDPIEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDT-IFTGCNVENA 59
M I++F++LD QNL +++ R AYCPYS VGAA+L ++D+ ++ GCN+EN+
Sbjct: 35 MDNFQIVDFNSLDETVQNLLMEAVKIRKRAYCPYSNFSVGAAILTEEDSRMYAGCNIENS 94
Query: 60 SYGMTICAEKTAISKAISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDI 119
+ ++CAE++A++KA+ +G TKFK + AI+ +F +PCG CRQ + EF S DI
Sbjct: 95 TLTPSMCAERSAVAKAVCDGYTKFKCV---AIVAHQREFTAPCGVCRQTLNEFCSSDGDI 151
Query: 120 QVLIVK 125
++ + +
Sbjct: 152 EIYLSR 157
>gi|374606357|ref|ZP_09679236.1| cytidine deaminase [Paenibacillus dendritiformis C454]
gi|374388063|gb|EHQ59506.1| cytidine deaminase [Paenibacillus dendritiformis C454]
Length = 152
Score = 108 bits (271), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 58/113 (51%), Positives = 77/113 (68%), Gaps = 8/113 (7%)
Query: 15 IEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISK 74
+++ L +++AR AY PYS+ QVGAA+L IF GCNVENASYG+T CAE+TA+ K
Sbjct: 20 MKEQLIQEALEARKQAYAPYSRFQVGAAVLA-GGKIFRGCNVENASYGLTNCAERTAVFK 78
Query: 75 AISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSD 127
A+SEG+ K + IAV A D+ V+PCG+CRQV+AEF CD I S+
Sbjct: 79 AVSEGEKKIEAIAVVA---DTEGPVAPCGACRQVLAEF----CDSGTRIYLSN 124
>gi|212640596|ref|YP_002317116.1| cytidine/deoxycytidine deaminase [Anoxybacillus flavithermus WK1]
gi|212562076|gb|ACJ35131.1| Cytidine/deoxycytidine deaminase [Anoxybacillus flavithermus WK1]
Length = 131
Score = 108 bits (271), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 54/112 (48%), Positives = 74/112 (66%), Gaps = 3/112 (2%)
Query: 16 EQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKA 75
+Q L + QAR+ AY PYSK +VGAALL +D ++ GCN+ENASYG+ CAE+TA+ KA
Sbjct: 3 KQQLIEAAKQARERAYVPYSKFKVGAALLTKDGKVYGGCNIENASYGLCNCAERTALFKA 62
Query: 76 ISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSD 127
SEG ++ +AV A D+ + V PCG+CRQVI E P + + +K D
Sbjct: 63 YSEGDHEYAMLAVVA---DTERPVPPCGACRQVIVELCDPNMPVVLANMKGD 111
>gi|423460173|ref|ZP_17436970.1| cytidine deaminase [Bacillus cereus BAG5X2-1]
gi|401140226|gb|EJQ47782.1| cytidine deaminase [Bacillus cereus BAG5X2-1]
Length = 131
Score = 108 bits (271), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 51/103 (49%), Positives = 72/103 (69%), Gaps = 3/103 (2%)
Query: 29 NAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQTKFKRIAV 88
AY PYSK VGAAL+ ++ I+TGCN+ENASYG+ CAE+TAI KA+SEG+ F + +
Sbjct: 16 KAYIPYSKFPVGAALVTKEGKIYTGCNIENASYGLCNCAERTAIFKAVSEGERDFSYLVI 75
Query: 89 SAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQV 131
+ +++ +SPCG+CRQVIAEF P + ++ VK D +V
Sbjct: 76 TG---ETDGPISPCGACRQVIAEFCEPKMPVLLMNVKGDEKEV 115
>gi|335031938|ref|ZP_08525353.1| cytidine deaminase [Streptococcus anginosus SK52 = DSM 20563]
gi|333768409|gb|EGL45600.1| cytidine deaminase [Streptococcus anginosus SK52 = DSM 20563]
Length = 129
Score = 108 bits (271), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 54/114 (47%), Positives = 77/114 (67%), Gaps = 5/114 (4%)
Query: 18 NLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAIS 77
L +L+I+ AY PYS +GA L+ ++ IFTG N+ENAS+G+T C E+TAI KA+S
Sbjct: 5 KLIDLAIETSKKAYVPYSHFPIGAVLVAKNGQIFTGVNIENASFGLTNCGERTAIFKAVS 64
Query: 78 EGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQV 131
EG T F+ + V ++ + VSPCG+CRQV+AEF S D++V +V D+S V
Sbjct: 65 EGVTDFEELIVYG---ETEQPVSPCGACRQVMAEFFSK--DLKVTLVAKDKSTV 113
>gi|319939044|ref|ZP_08013408.1| cytidine deaminase [Streptococcus anginosus 1_2_62CV]
gi|319812094|gb|EFW08360.1| cytidine deaminase [Streptococcus anginosus 1_2_62CV]
Length = 129
Score = 108 bits (271), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 54/113 (47%), Positives = 77/113 (68%), Gaps = 5/113 (4%)
Query: 19 LANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISE 78
L +L+I+ AY PYS +GA L+ ++ IFTG N+ENAS+G+T C E+TAI KA+SE
Sbjct: 6 LIDLAIETSKKAYVPYSHFPIGAVLVAKNGQIFTGVNIENASFGLTNCGERTAIFKAVSE 65
Query: 79 GQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQV 131
G T F+ + V ++ + VSPCG+CRQV+AEF S D++V +V D+S V
Sbjct: 66 GVTDFEELIVYG---ETEQPVSPCGACRQVMAEFFSK--DLKVTLVAKDKSTV 113
>gi|337282144|ref|YP_004621615.1| cytidine deaminase [Streptococcus parasanguinis ATCC 15912]
gi|335369737|gb|AEH55687.1| cytidine deaminase [Streptococcus parasanguinis ATCC 15912]
Length = 129
Score = 108 bits (271), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 51/114 (44%), Positives = 74/114 (64%), Gaps = 5/114 (4%)
Query: 18 NLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAIS 77
+ +L+++ AY PYS +GA LL +D I+TG N+ENAS+G+T C E+TAI KA+S
Sbjct: 5 EMVDLAVEVSKQAYVPYSHFPIGAVLLTKDGEIYTGVNIENASFGLTNCGERTAIFKAVS 64
Query: 78 EGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQV 131
EG F+ + + + K +SPCG+CRQV+AEF P D+ V +V D+S V
Sbjct: 65 EGARDFQELIIYG---QTEKPISPCGACRQVMAEFFEP--DLPVTLVSKDKSTV 113
>gi|423470518|ref|ZP_17447262.1| cytidine deaminase [Bacillus cereus BAG6O-2]
gi|423483884|ref|ZP_17460574.1| cytidine deaminase [Bacillus cereus BAG6X1-2]
gi|423558115|ref|ZP_17534417.1| cytidine deaminase [Bacillus cereus MC67]
gi|401141435|gb|EJQ48990.1| cytidine deaminase [Bacillus cereus BAG6X1-2]
gi|401191383|gb|EJQ98405.1| cytidine deaminase [Bacillus cereus MC67]
gi|402436184|gb|EJV68216.1| cytidine deaminase [Bacillus cereus BAG6O-2]
Length = 132
Score = 108 bits (271), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 55/96 (57%), Positives = 67/96 (69%), Gaps = 3/96 (3%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
+ L + +AR AY PYSK QVGAALL QD I+ GCNVENASYG+ CAE+TA+ KAI
Sbjct: 4 KQLIQEATEARKRAYVPYSKFQVGAALLTQDGKIYRGCNVENASYGLCNCAERTALFKAI 63
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEF 112
SEG +F IAV A D+ + V PCG+CRQV+ E
Sbjct: 64 SEGDNEFVAIAVVA---DTKRPVPPCGACRQVMVEL 96
>gi|194863065|ref|XP_001970259.1| GG10525 [Drosophila erecta]
gi|190662126|gb|EDV59318.1| GG10525 [Drosophila erecta]
Length = 158
Score = 108 bits (271), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 51/108 (47%), Positives = 70/108 (64%), Gaps = 2/108 (1%)
Query: 5 DIMEFSALDPIEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMT 64
++ EF +LDP + L + +AR AYCPYS VGAAL D +I++GCN+EN +Y
Sbjct: 14 NVREFESLDPSIKELILAATEARKQAYCPYSNFAVGAALRTSDGSIYSGCNIENGAYATC 73
Query: 65 ICAEKTAISKAISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEF 112
ICAE+TA KAISEG+ F +A + + N F +PCG CRQ ++EF
Sbjct: 74 ICAERTAAVKAISEGKRDF--VACAVVAQQDNGFTTPCGVCRQFLSEF 119
>gi|317495754|ref|ZP_07954119.1| haloacid dehalogenase hydrolase [Gemella morbillorum M424]
gi|316914207|gb|EFV35688.1| haloacid dehalogenase hydrolase [Gemella morbillorum M424]
Length = 431
Score = 108 bits (271), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 56/101 (55%), Positives = 70/101 (69%), Gaps = 3/101 (2%)
Query: 15 IEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISK 74
I L +I+A + AY PYS +VGAA+L + I+TGCN+ENASY T CAE+TAI K
Sbjct: 296 INTKLIEAAIEATNFAYVPYSNFKVGAAILADNGKIYTGCNIENASYSPTNCAERTAIFK 355
Query: 75 AISEGQTKFKRIAVSAILPDSN--KFVSPCGSCRQVIAEFS 113
A+SEG TKFK+IAV P+ N + PCG CRQVIAEF+
Sbjct: 356 AVSEGVTKFKKIAVVG-GPNGNLENYCPPCGVCRQVIAEFA 395
>gi|332652339|ref|ZP_08418084.1| cytidine deaminase [Ruminococcaceae bacterium D16]
gi|332517485|gb|EGJ47088.1| cytidine deaminase [Ruminococcaceae bacterium D16]
Length = 131
Score = 108 bits (271), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 54/121 (44%), Positives = 74/121 (61%), Gaps = 3/121 (2%)
Query: 16 EQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKA 75
+Q L +++ R +Y PYS VGAALLC+D T+FTGCNVENA+YG T+CAE+TA+ KA
Sbjct: 3 DQELVQRALEMRKFSYAPYSHFAVGAALLCEDGTVFTGCNVENAAYGSTLCAERTALVKA 62
Query: 76 ISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQVGLIT 135
+SEG+T AI F PCG+CRQ++ EF +P + + Q GL
Sbjct: 63 VSEGRT--TGWTTLAIAGSGEDFCWPCGACRQMLYEF-APKLRVLAVNQHGQFQQAGLWE 119
Query: 136 I 136
+
Sbjct: 120 L 120
>gi|410728718|ref|ZP_11366809.1| cytidine deaminase, homotetrameric [Clostridium sp. Maddingley
MBC34-26]
gi|410596563|gb|EKQ51224.1| cytidine deaminase, homotetrameric [Clostridium sp. Maddingley
MBC34-26]
Length = 133
Score = 108 bits (271), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 53/111 (47%), Positives = 74/111 (66%), Gaps = 5/111 (4%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
+ L +++ R+ AY PYS +VGAA+L + I+ GCN+ENAS+G T CAE+T I K I
Sbjct: 4 KELIKVALDYRNRAYSPYSDFKVGAAVLFESGKIYGGCNIENASFGATNCAERTGIFKGI 63
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSD 127
SEG+TK K +AV L + + PCG CRQVI EF S D++++I KS+
Sbjct: 64 SEGETKIKAVAVVGSLEE---YTYPCGICRQVIVEFGSE--DVKIIIAKSE 109
>gi|339301584|ref|ZP_08650681.1| cytidine deaminase [Streptococcus agalactiae ATCC 13813]
gi|319744972|gb|EFV97301.1| cytidine deaminase [Streptococcus agalactiae ATCC 13813]
Length = 138
Score = 108 bits (271), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 55/111 (49%), Positives = 74/111 (66%), Gaps = 4/111 (3%)
Query: 19 LANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISE 78
L L+++A +NAY PYSK VGAAL + IFTGCNVEN SYG+ CAE+TAI KA+SE
Sbjct: 15 LKKLAVKASENAYVPYSKFPVGAALRTAEGKIFTGCNVENISYGLANCAERTAIFKAVSE 74
Query: 79 GQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRS 129
G F I AI ++ + +SPCG+CRQV+ EF + + LI K+ ++
Sbjct: 75 GYKDFSEI---AIYGNTEEPISPCGACRQVMVEFFNKNAKV-TLIAKNGKT 121
>gi|125985693|ref|XP_001356610.1| GA21017 [Drosophila pseudoobscura pseudoobscura]
gi|195147778|ref|XP_002014851.1| GL18729 [Drosophila persimilis]
gi|54644934|gb|EAL33674.1| GA21017 [Drosophila pseudoobscura pseudoobscura]
gi|194106804|gb|EDW28847.1| GL18729 [Drosophila persimilis]
Length = 158
Score = 108 bits (271), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 51/108 (47%), Positives = 69/108 (63%), Gaps = 2/108 (1%)
Query: 5 DIMEFSALDPIEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMT 64
++ E +LD Q L + +AR AYCPYS VGAAL D +I+TGCN+EN +Y +
Sbjct: 14 NVQEHDSLDASVQELIRAAAEARKQAYCPYSNFAVGAALRTSDGSIYTGCNIENGAYAAS 73
Query: 65 ICAEKTAISKAISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEF 112
ICAE+TA KAISEG+ F +A + + N F +PCG CRQ ++EF
Sbjct: 74 ICAERTAAVKAISEGKRDF--VACAVVAQQDNGFTTPCGVCRQFLSEF 119
>gi|110645436|gb|AAI18901.1| cytidine deaminase [Xenopus (Silurana) tropicalis]
Length = 151
Score = 108 bits (271), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 51/98 (52%), Positives = 70/98 (71%), Gaps = 2/98 (2%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
Q L S +A+ A+CPYSK +VGAALL D + GCNVENA Y + ICAE+TAI KA+
Sbjct: 22 QRLVAQSHEAKQRAHCPYSKFRVGAALLTADGKVILGCNVENACYALGICAERTAIQKAV 81
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSS 114
SEG +F+ IAV++ + +F++PCG+CRQV+ EF +
Sbjct: 82 SEGYKEFRAIAVASDV--ETEFITPCGACRQVMREFGA 117
>gi|430826459|ref|ZP_19444642.1| cytidine deaminase [Enterococcus faecium E0164]
gi|430890732|ref|ZP_19484422.1| cytidine deaminase [Enterococcus faecium E1575]
gi|431210740|ref|ZP_19501026.1| cytidine deaminase [Enterococcus faecium E1620]
gi|431764888|ref|ZP_19553414.1| cytidine deaminase [Enterococcus faecium E4215]
gi|430445086|gb|ELA54873.1| cytidine deaminase [Enterococcus faecium E0164]
gi|430555780|gb|ELA95309.1| cytidine deaminase [Enterococcus faecium E1575]
gi|430570599|gb|ELB09548.1| cytidine deaminase [Enterococcus faecium E1620]
gi|430629659|gb|ELB66048.1| cytidine deaminase [Enterococcus faecium E4215]
Length = 132
Score = 108 bits (271), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 54/110 (49%), Positives = 73/110 (66%), Gaps = 5/110 (4%)
Query: 15 IEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISK 74
++Q N +I+A D AY PYS VGA L+ + I+ G N+ENAS+G+T CAE+TA K
Sbjct: 4 LKQEWINTAIEALDKAYVPYSHFPVGACLVTESGKIYQGINIENASFGLTNCAERTAFFK 63
Query: 75 AISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIV 124
A+SEG+ F + V+ PD VSPCG+CRQV+AEF SP D+ V +V
Sbjct: 64 AVSEGEKTFTHLVVAGHTPDP---VSPCGACRQVMAEFCSP--DMPVTLV 108
>gi|373859077|ref|ZP_09601809.1| cytidine deaminase [Bacillus sp. 1NLA3E]
gi|372451168|gb|EHP24647.1| cytidine deaminase [Bacillus sp. 1NLA3E]
Length = 132
Score = 108 bits (271), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 54/102 (52%), Positives = 74/102 (72%), Gaps = 7/102 (6%)
Query: 26 ARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQTKFKR 85
AR+ AY PYSK +VGAALL D ++ GCN+ENA+Y MT CAE+TA+ KA+S+G T+F
Sbjct: 13 AREKAYVPYSKFKVGAALLTVDGKVYHGCNIENAAYSMTNCAERTALFKAVSDGDTEF-- 70
Query: 86 IAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSD 127
A+ A++ D+ VSPCG+CRQVI+EF C +L+V S+
Sbjct: 71 -AMLAVIADTEGPVSPCGACRQVISEF----CSKDMLVVLSN 107
>gi|77406483|ref|ZP_00783538.1| cytidine deaminase [Streptococcus agalactiae H36B]
gi|77409387|ref|ZP_00786086.1| cytidine deaminase [Streptococcus agalactiae COH1]
gi|77411032|ref|ZP_00787387.1| cytidine deaminase [Streptococcus agalactiae CJB111]
gi|77413249|ref|ZP_00789446.1| cytidine deaminase [Streptococcus agalactiae 515]
gi|77160709|gb|EAO71823.1| cytidine deaminase [Streptococcus agalactiae 515]
gi|77162956|gb|EAO73912.1| cytidine deaminase [Streptococcus agalactiae CJB111]
gi|77171996|gb|EAO75166.1| cytidine deaminase [Streptococcus agalactiae COH1]
gi|77174918|gb|EAO77732.1| cytidine deaminase [Streptococcus agalactiae H36B]
Length = 138
Score = 108 bits (271), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 55/111 (49%), Positives = 74/111 (66%), Gaps = 4/111 (3%)
Query: 19 LANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISE 78
L L+++A +NAY PYSK VGAAL + IFTGCNVEN SYG+ CAE+TAI KA+SE
Sbjct: 15 LKKLAVKASENAYVPYSKFPVGAALRTAEGKIFTGCNVENISYGLANCAERTAIFKAVSE 74
Query: 79 GQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRS 129
G F I AI ++ + +SPCG+CRQV+ EF + + LI K+ ++
Sbjct: 75 GYKDFSEI---AIYGNTEEPISPCGACRQVMVEFFNKNAKV-TLIAKNGKT 121
>gi|62857659|ref|NP_001017217.1| cytidine deaminase [Xenopus (Silurana) tropicalis]
gi|89269568|emb|CAJ82852.1| cytidine deaminase [Xenopus (Silurana) tropicalis]
Length = 151
Score = 108 bits (271), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 51/98 (52%), Positives = 70/98 (71%), Gaps = 2/98 (2%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
Q L S +A+ A+CPYSK +VGAALL D + GCNVENA Y + ICAE+TAI KA+
Sbjct: 22 QRLVAQSHEAKQRAHCPYSKFRVGAALLTADGKVILGCNVENACYALGICAERTAIQKAV 81
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSS 114
SEG +F+ IAV++ + +F++PCG+CRQV+ EF +
Sbjct: 82 SEGYKEFRAIAVASDV--ETEFITPCGACRQVMREFGA 117
>gi|229061994|ref|ZP_04199320.1| Cytidine deaminase [Bacillus cereus AH603]
gi|423521840|ref|ZP_17498313.1| cytidine deaminase [Bacillus cereus HuA4-10]
gi|228717303|gb|EEL68976.1| Cytidine deaminase [Bacillus cereus AH603]
gi|401176502|gb|EJQ83697.1| cytidine deaminase [Bacillus cereus HuA4-10]
Length = 132
Score = 108 bits (271), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 55/96 (57%), Positives = 67/96 (69%), Gaps = 3/96 (3%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
+ L + +AR AY PYSK QVGAALL QD I+ GCNVENASYG+ CAE+TA+ KAI
Sbjct: 4 KQLIQEATEARKRAYVPYSKFQVGAALLTQDGKIYRGCNVENASYGLCNCAERTALFKAI 63
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEF 112
SEG +F IAV A D+ + V PCG+CRQV+ E
Sbjct: 64 SEGDNEFVSIAVVA---DTKRPVPPCGACRQVMIEL 96
>gi|225690562|ref|NP_001139516.1| cytidine deaminase [Gallus gallus]
Length = 191
Score = 108 bits (270), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 50/107 (46%), Positives = 75/107 (70%), Gaps = 6/107 (5%)
Query: 25 QARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQTKFK 84
+A+D AYCPYS+ VGAA++ IF+GCNVENA Y + +CAE+ AI KAISEG T+F+
Sbjct: 71 EAKDCAYCPYSRFPVGAAVVTAGGEIFSGCNVENACYSLGVCAERIAIQKAISEGHTRFR 130
Query: 85 RIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQV 131
+A+++ D + F++PCG+CRQV+ EF + D + + K D + +
Sbjct: 131 AMAIAS---DMSDFITPCGACRQVMREFGT---DWDLYLTKPDGTYI 171
>gi|322516986|ref|ZP_08069876.1| cytidine deaminase [Streptococcus vestibularis ATCC 49124]
gi|322124469|gb|EFX95964.1| cytidine deaminase [Streptococcus vestibularis ATCC 49124]
Length = 132
Score = 108 bits (270), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 54/108 (50%), Positives = 77/108 (71%), Gaps = 5/108 (4%)
Query: 26 ARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQTKFKR 85
A +NAY PYSK +VGAAL+ ++ IF GCN+ENAS+G+T CAE+TAI KA+SEG F+
Sbjct: 16 AAENAYVPYSKFRVGAALITKNGEIFQGCNIENASFGLTNCAERTAIFKAVSEGYCDFEC 75
Query: 86 IAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQVGL 133
+AV D+ + +SPCG+CRQV+ EF D +V+++ D+S V +
Sbjct: 76 LAVYG---DTKEPISPCGACRQVMVEFFES--DSKVILIAKDKSTVEM 118
>gi|320170664|gb|EFW47563.1| cytidine deaminase [Capsaspora owczarzaki ATCC 30864]
Length = 142
Score = 108 bits (270), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 66/135 (48%), Positives = 80/135 (59%), Gaps = 9/135 (6%)
Query: 7 MEFSALDPIEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTIC 66
M ++ P E L N + A+ AY PYS +VGAAL IFTGCNVEN+SYG+ IC
Sbjct: 1 MSTASTTPAE--LFNAANTAKTFAYAPYSNFRVGAALRTTSGRIFTGCNVENSSYGLAIC 58
Query: 67 AEKTAISKAISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKS 126
AE+TA+ KA+SEG +F I V+ L D KF SPCG+CRQ I EF DI V + K
Sbjct: 59 AERTALVKAVSEGFREFTDICVTTDLTD--KFCSPCGACRQFIVEF---GLDITVHLCKP 113
Query: 127 DRSQVGLITIDGMYL 141
D S IT G L
Sbjct: 114 DGSS--QITTSGRIL 126
>gi|317128318|ref|YP_004094600.1| cytidine deaminase [Bacillus cellulosilyticus DSM 2522]
gi|315473266|gb|ADU29869.1| cytidine deaminase [Bacillus cellulosilyticus DSM 2522]
Length = 132
Score = 108 bits (270), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 54/99 (54%), Positives = 72/99 (72%), Gaps = 5/99 (5%)
Query: 25 QARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQTKFK 84
+AR+ AY PYSK +VGAALL +D +F GCN+ENA+Y M CAE+TAI KA+SEG FK
Sbjct: 12 KARERAYAPYSKFKVGAALLSDNDKVFHGCNIENAAYSMCNCAERTAIFKAVSEGVRHFK 71
Query: 85 RIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLI 123
+AV A D+ VSPCG+CRQVI+E S D+++++
Sbjct: 72 ALAVVA---DTEGPVSPCGACRQVISELLSK--DVKIIL 105
>gi|425054889|ref|ZP_18458390.1| cytidine deaminase [Enterococcus faecium 505]
gi|403035023|gb|EJY46431.1| cytidine deaminase [Enterococcus faecium 505]
Length = 132
Score = 108 bits (270), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 53/113 (46%), Positives = 74/113 (65%), Gaps = 5/113 (4%)
Query: 15 IEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISK 74
++Q N +I+A D AY PYS VGA L+ + I+ G N+ENAS+G+T CAE+TA K
Sbjct: 4 LKQEWINTAIEALDKAYVPYSHFPVGACLVTESGKIYQGINIENASFGLTNCAERTAFFK 63
Query: 75 AISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSD 127
A+SEG+ F + V+ PD +SPCG+CRQV+AEF +P D+ V +V D
Sbjct: 64 AVSEGERSFTHLVVAGHTPDP---ISPCGACRQVMAEFCAP--DMPVTLVGDD 111
>gi|195339128|ref|XP_002036173.1| GM16857 [Drosophila sechellia]
gi|194130053|gb|EDW52096.1| GM16857 [Drosophila sechellia]
Length = 158
Score = 108 bits (270), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 52/108 (48%), Positives = 69/108 (63%), Gaps = 2/108 (1%)
Query: 5 DIMEFSALDPIEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMT 64
++ EF +LD Q L + +AR AYCPYS VGAAL D TI++GCN+EN +Y
Sbjct: 14 NVREFQSLDHSIQELILAATEARKQAYCPYSNFAVGAALRTSDGTIYSGCNIENGAYATC 73
Query: 65 ICAEKTAISKAISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEF 112
ICAE+TA KAISEG+ F +A + + N F +PCG CRQ ++EF
Sbjct: 74 ICAERTAAVKAISEGKRDF--VACAVVAQQDNGFTTPCGVCRQFLSEF 119
>gi|386714537|ref|YP_006180860.1| cytidine deaminase [Halobacillus halophilus DSM 2266]
gi|384074093|emb|CCG45586.1| cytidine deaminase [Halobacillus halophilus DSM 2266]
Length = 135
Score = 108 bits (270), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 52/97 (53%), Positives = 69/97 (71%), Gaps = 3/97 (3%)
Query: 16 EQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKA 75
++ L + +R+ AY PYSK VGAALL D T++TGCN+ENA+Y + CAE+ AI KA
Sbjct: 3 QEQLIQHAKDSREKAYTPYSKFPVGAALLTADGTLYTGCNIENAAYPVACCAERVAIFKA 62
Query: 76 ISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEF 112
ISEG KF+ +AV A D+ + V PCGSCRQV++EF
Sbjct: 63 ISEGHVKFQELAVVA---DTKRPVPPCGSCRQVMSEF 96
>gi|229155510|ref|ZP_04283618.1| Cytidine deaminase [Bacillus cereus ATCC 4342]
gi|228627828|gb|EEK84547.1| Cytidine deaminase [Bacillus cereus ATCC 4342]
Length = 131
Score = 108 bits (270), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 51/104 (49%), Positives = 73/104 (70%), Gaps = 3/104 (2%)
Query: 28 DNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQTKFKRIA 87
+ AY PYSK VGAAL+ ++ I+TGCN+ENASYG+ CAE+TAI KA+SEG+ F +
Sbjct: 15 EKAYIPYSKFPVGAALVTKEGKIYTGCNIENASYGLCNCAERTAIFKAVSEGERDFSYLV 74
Query: 88 VSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQV 131
++ +++ +SPCG+CRQVIAEF +P + + VK D +V
Sbjct: 75 ITG---ETDGPISPCGACRQVIAEFCNPKMPVLLTNVKGDEKEV 115
>gi|326791150|ref|YP_004308971.1| cytidine deaminase [Clostridium lentocellum DSM 5427]
gi|326541914|gb|ADZ83773.1| cytidine deaminase [Clostridium lentocellum DSM 5427]
Length = 134
Score = 108 bits (270), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 52/90 (57%), Positives = 66/90 (73%), Gaps = 3/90 (3%)
Query: 25 QARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQTKFK 84
+A++ AY PYSK +VGAA+L + I+TGCN+ENAS+G T CAE+TAI KA+SEG+
Sbjct: 13 EAQEQAYVPYSKFKVGAAVLMKSGKIYTGCNIENASFGATNCAERTAIFKAVSEGE---H 69
Query: 85 RIAVSAILPDSNKFVSPCGSCRQVIAEFSS 114
IA AI+ N+F PCG CRQVIAEF S
Sbjct: 70 EIAAIAIVGSHNEFTYPCGICRQVIAEFMS 99
>gi|218231414|ref|YP_002366615.1| cytidine deaminase [Bacillus cereus B4264]
gi|218896862|ref|YP_002445273.1| cytidine deaminase [Bacillus cereus G9842]
gi|228958211|ref|ZP_04119941.1| Cytidine deaminase [Bacillus thuringiensis serovar pakistani str.
T13001]
gi|228964924|ref|ZP_04126028.1| Cytidine deaminase [Bacillus thuringiensis serovar sotto str.
T04001]
gi|229043689|ref|ZP_04191395.1| Cytidine deaminase [Bacillus cereus AH676]
gi|229150136|ref|ZP_04278358.1| Cytidine deaminase [Bacillus cereus m1550]
gi|402561032|ref|YP_006603756.1| cytidine deaminase [Bacillus thuringiensis HD-771]
gi|423361939|ref|ZP_17339441.1| cytidine deaminase [Bacillus cereus VD022]
gi|423383324|ref|ZP_17360580.1| cytidine deaminase [Bacillus cereus BAG1X1-2]
gi|423530224|ref|ZP_17506669.1| cytidine deaminase [Bacillus cereus HuB1-1]
gi|423580119|ref|ZP_17556230.1| cytidine deaminase [Bacillus cereus VD014]
gi|423629212|ref|ZP_17604960.1| cytidine deaminase [Bacillus cereus VD154]
gi|423647844|ref|ZP_17623414.1| cytidine deaminase [Bacillus cereus VD169]
gi|423654706|ref|ZP_17630005.1| cytidine deaminase [Bacillus cereus VD200]
gi|218159371|gb|ACK59363.1| cytidine deaminase [Bacillus cereus B4264]
gi|218541331|gb|ACK93725.1| cytidine deaminase [Bacillus cereus G9842]
gi|228633255|gb|EEK89862.1| Cytidine deaminase [Bacillus cereus m1550]
gi|228725676|gb|EEL76927.1| Cytidine deaminase [Bacillus cereus AH676]
gi|228794765|gb|EEM42267.1| Cytidine deaminase [Bacillus thuringiensis serovar sotto str.
T04001]
gi|228801482|gb|EEM48369.1| Cytidine deaminase [Bacillus thuringiensis serovar pakistani str.
T13001]
gi|401078830|gb|EJP87135.1| cytidine deaminase [Bacillus cereus VD022]
gi|401217574|gb|EJR24268.1| cytidine deaminase [Bacillus cereus VD014]
gi|401267967|gb|EJR74022.1| cytidine deaminase [Bacillus cereus VD154]
gi|401285798|gb|EJR91637.1| cytidine deaminase [Bacillus cereus VD169]
gi|401294843|gb|EJS00469.1| cytidine deaminase [Bacillus cereus VD200]
gi|401644184|gb|EJS61878.1| cytidine deaminase [Bacillus cereus BAG1X1-2]
gi|401789684|gb|AFQ15723.1| cytidine deaminase [Bacillus thuringiensis HD-771]
gi|402446739|gb|EJV78597.1| cytidine deaminase [Bacillus cereus HuB1-1]
Length = 131
Score = 108 bits (270), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 55/118 (46%), Positives = 76/118 (64%), Gaps = 10/118 (8%)
Query: 29 NAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQTKFKRIAV 88
AY PYSK VGAAL+ ++ I+TGCN+ENASYG+ CAE+TAI KA+SEG+ F + +
Sbjct: 16 KAYIPYSKFPVGAALVTKEGKIYTGCNIENASYGLCNCAERTAIFKAVSEGERDFSYLVI 75
Query: 89 SAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQV-------GLITIDGM 139
+ +++ +SPCG+CRQVIAEF P + + VK D +V G TID +
Sbjct: 76 TG---ETDGPISPCGACRQVIAEFCDPKMPVLLTNVKGDEKEVTVEQLLPGAFTIDDL 130
>gi|23099206|ref|NP_692672.1| cytidine:deoxycytidine deaminase [Oceanobacillus iheyensis HTE831]
gi|22777434|dbj|BAC13707.1| cytidine:deoxycytidine deaminase [Oceanobacillus iheyensis HTE831]
Length = 133
Score = 108 bits (270), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 55/124 (44%), Positives = 84/124 (67%), Gaps = 6/124 (4%)
Query: 16 EQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKA 75
+ L + S++A D+AY PYS VGAALL + ++TGCN+ENA+Y +T CAE+ AI KA
Sbjct: 3 KNQLLDASLKAMDSAYVPYSTFPVGAALLTKSGKLYTGCNIENAAYPVTCCAERVAIFKA 62
Query: 76 ISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQVGLIT 135
ISEG+T+F +AV+A ++ + V PCGSCRQV++EF + + I + + +V +T
Sbjct: 63 ISEGETQFAEMAVAA---NTKRPVPPCGSCRQVMSEFFTSSMKIHLTNL---NKEVKTLT 116
Query: 136 IDGM 139
I+ +
Sbjct: 117 IEEL 120
>gi|22537114|ref|NP_687965.1| cytidine deaminase [Streptococcus agalactiae 2603V/R]
gi|25010995|ref|NP_735390.1| cytidine deaminase [Streptococcus agalactiae NEM316]
gi|76788280|ref|YP_329669.1| cytidine deaminase [Streptococcus agalactiae A909]
gi|406709415|ref|YP_006764141.1| cytidine deaminase [Streptococcus agalactiae GD201008-001]
gi|421147397|ref|ZP_15607087.1| cytidine deaminase [Streptococcus agalactiae GB00112]
gi|424049511|ref|ZP_17787062.1| cytidine deaminase [Streptococcus agalactiae ZQ0910]
gi|22533975|gb|AAM99837.1|AE014235_10 cytidine deaminase [Streptococcus agalactiae 2603V/R]
gi|23095395|emb|CAD46600.1| Unknown [Streptococcus agalactiae NEM316]
gi|76563337|gb|ABA45921.1| cytidine deaminase [Streptococcus agalactiae A909]
gi|389648997|gb|EIM70483.1| cytidine deaminase [Streptococcus agalactiae ZQ0910]
gi|401686075|gb|EJS82065.1| cytidine deaminase [Streptococcus agalactiae GB00112]
gi|406650300|gb|AFS45701.1| cytidine deaminase [Streptococcus agalactiae GD201008-001]
Length = 129
Score = 108 bits (270), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 55/111 (49%), Positives = 74/111 (66%), Gaps = 4/111 (3%)
Query: 19 LANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISE 78
L L+++A +NAY PYSK VGAAL + IFTGCNVEN SYG+ CAE+TAI KA+SE
Sbjct: 6 LKKLAVKASENAYVPYSKFPVGAALRTAEGKIFTGCNVENISYGLANCAERTAIFKAVSE 65
Query: 79 GQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRS 129
G F I AI ++ + +SPCG+CRQV+ EF + + LI K+ ++
Sbjct: 66 GYKDFSEI---AIYGNTEEPISPCGACRQVMVEFFNKNAKV-TLIAKNGKT 112
>gi|121534216|ref|ZP_01666041.1| cytidine deaminase [Thermosinus carboxydivorans Nor1]
gi|121307319|gb|EAX48236.1| cytidine deaminase [Thermosinus carboxydivorans Nor1]
Length = 131
Score = 108 bits (270), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 51/89 (57%), Positives = 68/89 (76%), Gaps = 3/89 (3%)
Query: 25 QARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQTKFK 84
+AR+ AY PYS+ QVGAALL + ++TGCNVENASY +TICAE+TAI KA+SEG+ F
Sbjct: 10 KARELAYTPYSRFQVGAALLTKSGRVYTGCNVENASYSLTICAERTAIFKAVSEGERDFI 69
Query: 85 RIAVSAILPDSNKFVSPCGSCRQVIAEFS 113
+AV A P+ ++PCG+CRQV+ EF+
Sbjct: 70 ALAVVANAPEP---LAPCGACRQVMVEFA 95
>gi|163942057|ref|YP_001646941.1| cytidine deaminase [Bacillus weihenstephanensis KBAB4]
gi|229013521|ref|ZP_04170655.1| Cytidine deaminase [Bacillus mycoides DSM 2048]
gi|229135126|ref|ZP_04263928.1| Cytidine deaminase [Bacillus cereus BDRD-ST196]
gi|229169049|ref|ZP_04296765.1| Cytidine deaminase [Bacillus cereus AH621]
gi|423368352|ref|ZP_17345784.1| cytidine deaminase [Bacillus cereus VD142]
gi|423489485|ref|ZP_17466167.1| cytidine deaminase [Bacillus cereus BtB2-4]
gi|423495208|ref|ZP_17471852.1| cytidine deaminase [Bacillus cereus CER057]
gi|423497998|ref|ZP_17474615.1| cytidine deaminase [Bacillus cereus CER074]
gi|423512415|ref|ZP_17488946.1| cytidine deaminase [Bacillus cereus HuA2-1]
gi|423519001|ref|ZP_17495482.1| cytidine deaminase [Bacillus cereus HuA2-4]
gi|423591703|ref|ZP_17567734.1| cytidine deaminase [Bacillus cereus VD048]
gi|423598382|ref|ZP_17574382.1| cytidine deaminase [Bacillus cereus VD078]
gi|423660854|ref|ZP_17636023.1| cytidine deaminase [Bacillus cereus VDM022]
gi|423669885|ref|ZP_17644914.1| cytidine deaminase [Bacillus cereus VDM034]
gi|423673909|ref|ZP_17648848.1| cytidine deaminase [Bacillus cereus VDM062]
gi|163864254|gb|ABY45313.1| cytidine deaminase [Bacillus weihenstephanensis KBAB4]
gi|228614458|gb|EEK71567.1| Cytidine deaminase [Bacillus cereus AH621]
gi|228648355|gb|EEL04388.1| Cytidine deaminase [Bacillus cereus BDRD-ST196]
gi|228747758|gb|EEL97627.1| Cytidine deaminase [Bacillus mycoides DSM 2048]
gi|401080951|gb|EJP89232.1| cytidine deaminase [Bacillus cereus VD142]
gi|401151301|gb|EJQ58753.1| cytidine deaminase [Bacillus cereus CER057]
gi|401160056|gb|EJQ67435.1| cytidine deaminase [Bacillus cereus HuA2-4]
gi|401161285|gb|EJQ68652.1| cytidine deaminase [Bacillus cereus CER074]
gi|401231836|gb|EJR38338.1| cytidine deaminase [Bacillus cereus VD048]
gi|401236652|gb|EJR43109.1| cytidine deaminase [Bacillus cereus VD078]
gi|401299012|gb|EJS04612.1| cytidine deaminase [Bacillus cereus VDM034]
gi|401300895|gb|EJS06484.1| cytidine deaminase [Bacillus cereus VDM022]
gi|401310275|gb|EJS15600.1| cytidine deaminase [Bacillus cereus VDM062]
gi|402431721|gb|EJV63785.1| cytidine deaminase [Bacillus cereus BtB2-4]
gi|402449386|gb|EJV81223.1| cytidine deaminase [Bacillus cereus HuA2-1]
Length = 132
Score = 108 bits (270), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 55/96 (57%), Positives = 67/96 (69%), Gaps = 3/96 (3%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
+ L + +AR AY PYSK QVGAALL QD I+ GCNVENASYG+ CAE+TA+ KAI
Sbjct: 4 KQLIQEATEARKRAYVPYSKFQVGAALLTQDGKIYRGCNVENASYGLCNCAERTALFKAI 63
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEF 112
SEG +F IAV A D+ + V PCG+CRQV+ E
Sbjct: 64 SEGDNEFVAIAVVA---DTKRPVPPCGACRQVMIEL 96
>gi|417005199|ref|ZP_11943792.1| cytidine deaminase [Streptococcus agalactiae FSL S3-026]
gi|341577012|gb|EGS27420.1| cytidine deaminase [Streptococcus agalactiae FSL S3-026]
Length = 129
Score = 108 bits (270), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 55/111 (49%), Positives = 74/111 (66%), Gaps = 4/111 (3%)
Query: 19 LANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISE 78
L L+++A +NAY PYSK VGAAL + IFTGCNVEN SYG+ CAE+TAI KA+SE
Sbjct: 6 LKKLAVKASENAYVPYSKFPVGAALRTAEGKIFTGCNVENISYGLANCAERTAIFKAVSE 65
Query: 79 GQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRS 129
G F I AI ++ + +SPCG+CRQV+ EF + + LI K+ ++
Sbjct: 66 GYKDFSEI---AIYGNTEEPISPCGACRQVMVEFFNKNAKV-TLIAKNGKT 112
>gi|228939047|ref|ZP_04101645.1| Cytidine deaminase [Bacillus thuringiensis serovar berliner ATCC
10792]
gi|228971927|ref|ZP_04132548.1| Cytidine deaminase [Bacillus thuringiensis serovar thuringiensis
str. T01001]
gi|228978534|ref|ZP_04138910.1| Cytidine deaminase [Bacillus thuringiensis Bt407]
gi|384185839|ref|YP_005571735.1| cytidine deaminase [Bacillus thuringiensis serovar chinensis CT-43]
gi|410674132|ref|YP_006926503.1| cytidine deaminase Cdd [Bacillus thuringiensis Bt407]
gi|452198165|ref|YP_007478246.1| Cytidine deaminase [Bacillus thuringiensis serovar thuringiensis
str. IS5056]
gi|228781188|gb|EEM29390.1| Cytidine deaminase [Bacillus thuringiensis Bt407]
gi|228788017|gb|EEM35975.1| Cytidine deaminase [Bacillus thuringiensis serovar thuringiensis
str. T01001]
gi|228820622|gb|EEM66649.1| Cytidine deaminase [Bacillus thuringiensis serovar berliner ATCC
10792]
gi|326939548|gb|AEA15444.1| cytidine deaminase [Bacillus thuringiensis serovar chinensis CT-43]
gi|409173261|gb|AFV17566.1| cytidine deaminase Cdd [Bacillus thuringiensis Bt407]
gi|452103558|gb|AGG00498.1| Cytidine deaminase [Bacillus thuringiensis serovar thuringiensis
str. IS5056]
Length = 131
Score = 108 bits (270), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 55/118 (46%), Positives = 76/118 (64%), Gaps = 10/118 (8%)
Query: 29 NAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQTKFKRIAV 88
AY PYSK VGAAL+ ++ I+TGCN+ENASYG+ CAE+TAI KA+SEG+ F + +
Sbjct: 16 KAYIPYSKFPVGAALVTKEGKIYTGCNIENASYGLCNCAERTAIFKAVSEGERDFSYLVI 75
Query: 89 SAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQV-------GLITIDGM 139
+ +++ +SPCG+CRQVIAEF P + + VK D +V G TID +
Sbjct: 76 TG---ETDGPISPCGACRQVIAEFCDPKMPVLLTNVKGDEKEVTVEQLLPGAFTIDDL 130
>gi|383788480|ref|YP_005473049.1| cytidine deaminase [Caldisericum exile AZM16c01]
gi|381364117|dbj|BAL80946.1| cytidine deaminase [Caldisericum exile AZM16c01]
Length = 132
Score = 108 bits (270), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 54/102 (52%), Positives = 74/102 (72%), Gaps = 6/102 (5%)
Query: 23 SIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQTK 82
+I+A D+AY PYSK +VGAALL + IFTGCNVEN+SYG +ICAE+ AI KAISEG+ +
Sbjct: 10 AIEAMDSAYAPYSKFKVGAALLTKSGKIFTGCNVENSSYGASICAERVAIFKAISEGERE 69
Query: 83 FKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIV 124
F+ + V+ + + PCG CRQVI+EFS+ D+ + +V
Sbjct: 70 FELLIVATKTEEPS---PPCGICRQVISEFSN---DLPIFLV 105
>gi|228920632|ref|ZP_04083977.1| Cytidine deaminase [Bacillus thuringiensis serovar huazhongensis
BGSC 4BD1]
gi|228839262|gb|EEM84558.1| Cytidine deaminase [Bacillus thuringiensis serovar huazhongensis
BGSC 4BD1]
Length = 131
Score = 108 bits (270), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 55/118 (46%), Positives = 76/118 (64%), Gaps = 10/118 (8%)
Query: 29 NAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQTKFKRIAV 88
AY PYSK VGAAL+ ++ I+TGCN+ENASYG+ CAE+TAI KA+SEG+ F + +
Sbjct: 16 KAYIPYSKFPVGAALVTKERKIYTGCNIENASYGLCNCAERTAIFKAVSEGERDFSYLVI 75
Query: 89 SAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQV-------GLITIDGM 139
+ +++ +SPCG+CRQVIAEF P + + VK D +V G TID +
Sbjct: 76 TG---ETDGPISPCGACRQVIAEFCDPKMPVLLTNVKGDEKEVTVEQLLPGAFTIDDL 130
>gi|229096407|ref|ZP_04227379.1| Cytidine deaminase [Bacillus cereus Rock3-29]
gi|229102523|ref|ZP_04233229.1| Cytidine deaminase [Bacillus cereus Rock3-28]
gi|229115418|ref|ZP_04244825.1| Cytidine deaminase [Bacillus cereus Rock1-3]
gi|407704304|ref|YP_006827889.1| exopolysaccharide biosynthesis protein [Bacillus thuringiensis
MC28]
gi|423380285|ref|ZP_17357569.1| cytidine deaminase [Bacillus cereus BAG1O-2]
gi|423443315|ref|ZP_17420221.1| cytidine deaminase [Bacillus cereus BAG4X2-1]
gi|423446433|ref|ZP_17423312.1| cytidine deaminase [Bacillus cereus BAG5O-1]
gi|423466405|ref|ZP_17443173.1| cytidine deaminase [Bacillus cereus BAG6O-1]
gi|423535803|ref|ZP_17512221.1| cytidine deaminase [Bacillus cereus HuB2-9]
gi|423538954|ref|ZP_17515345.1| cytidine deaminase [Bacillus cereus HuB4-10]
gi|423545186|ref|ZP_17521544.1| cytidine deaminase [Bacillus cereus HuB5-5]
gi|423617933|ref|ZP_17593767.1| cytidine deaminase [Bacillus cereus VD115]
gi|228668032|gb|EEL23467.1| Cytidine deaminase [Bacillus cereus Rock1-3]
gi|228680913|gb|EEL35084.1| Cytidine deaminase [Bacillus cereus Rock3-28]
gi|228686969|gb|EEL40875.1| Cytidine deaminase [Bacillus cereus Rock3-29]
gi|401132513|gb|EJQ40155.1| cytidine deaminase [Bacillus cereus BAG5O-1]
gi|401177538|gb|EJQ84730.1| cytidine deaminase [Bacillus cereus HuB4-10]
gi|401183361|gb|EJQ90478.1| cytidine deaminase [Bacillus cereus HuB5-5]
gi|401254319|gb|EJR60551.1| cytidine deaminase [Bacillus cereus VD115]
gi|401631037|gb|EJS48834.1| cytidine deaminase [Bacillus cereus BAG1O-2]
gi|402412401|gb|EJV44754.1| cytidine deaminase [Bacillus cereus BAG4X2-1]
gi|402415115|gb|EJV47439.1| cytidine deaminase [Bacillus cereus BAG6O-1]
gi|402461228|gb|EJV92941.1| cytidine deaminase [Bacillus cereus HuB2-9]
gi|407381989|gb|AFU12490.1| Cytidine deaminase [Bacillus thuringiensis MC28]
Length = 131
Score = 108 bits (270), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 55/118 (46%), Positives = 76/118 (64%), Gaps = 10/118 (8%)
Query: 29 NAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQTKFKRIAV 88
AY PYSK VGAAL+ ++ I+TGCN+ENASYG+ CAE+TAI KA+SEG+ F + +
Sbjct: 16 KAYIPYSKFPVGAALVTKEGKIYTGCNIENASYGLCNCAERTAIFKAVSEGERDFSYLVI 75
Query: 89 SAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQV-------GLITIDGM 139
+ +++ +SPCG+CRQVIAEF P + + VK D +V G TID +
Sbjct: 76 TG---ETDGPISPCGACRQVIAEFCDPKMRVLLTNVKGDEKEVTVEQLLPGAFTIDDL 130
>gi|423435399|ref|ZP_17412380.1| cytidine deaminase [Bacillus cereus BAG4X12-1]
gi|401125637|gb|EJQ33397.1| cytidine deaminase [Bacillus cereus BAG4X12-1]
Length = 131
Score = 108 bits (270), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 55/118 (46%), Positives = 76/118 (64%), Gaps = 10/118 (8%)
Query: 29 NAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQTKFKRIAV 88
AY PYSK VGAAL+ ++ I+TGCN+ENASYG+ CAE+TAI KA+SEG+ F + +
Sbjct: 16 KAYIPYSKFPVGAALVTKEGKIYTGCNIENASYGLCNCAERTAIFKAVSEGERDFSYLVI 75
Query: 89 SAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQV-------GLITIDGM 139
+ +++ +SPCG+CRQVIAEF P + + VK D +V G TID +
Sbjct: 76 TG---ETDGPISPCGACRQVIAEFCDPKMPVLLTNVKGDEKEVTVEQLLPGAFTIDDL 130
>gi|163791429|ref|ZP_02185838.1| cytidine deaminase [Carnobacterium sp. AT7]
gi|159873293|gb|EDP67388.1| cytidine deaminase [Carnobacterium sp. AT7]
Length = 136
Score = 108 bits (270), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 54/112 (48%), Positives = 76/112 (67%), Gaps = 5/112 (4%)
Query: 19 LANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISE 78
L N + + AY PYS VGAALL ++ IF+GCN+ENAS+G+T CAE+TAI KAISE
Sbjct: 11 LINKATDMLEKAYVPYSHFPVGAALLTKEGEIFSGCNIENASFGLTNCAERTAIFKAISE 70
Query: 79 GQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQ 130
G +F + V+ D++ +SPCG+CRQV+AEF P D+ VL+ + ++
Sbjct: 71 GNKEFDYLVVTG---DTDGPISPCGACRQVLAEFCGP--DMPVLLTNNKGNK 117
>gi|145535327|ref|XP_001453402.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124421113|emb|CAK86005.1| unnamed protein product [Paramecium tetraurelia]
Length = 144
Score = 108 bits (270), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 51/115 (44%), Positives = 77/115 (66%), Gaps = 3/115 (2%)
Query: 16 EQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKA 75
E+ L +++A++ AYCPYS +VG +LL + + I+TGCNVENASYG+ +CAE+ AI KA
Sbjct: 5 EEQLIQEALKAKERAYCPYSNFRVGCSLLTKTNKIYTGCNVENASYGLCVCAERVAICKA 64
Query: 76 ISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQ 130
+SEG + I VS D+++ PCG CRQ I EF DI+++ + D+++
Sbjct: 65 VSEGDRQISTIVVSC---DTDEPTFPCGMCRQTIIEFCYAGNDIKIIAIGKDQTK 116
>gi|116624316|ref|YP_826472.1| cytidine deaminase [Candidatus Solibacter usitatus Ellin6076]
gi|116227478|gb|ABJ86187.1| cytidine deaminase [Candidatus Solibacter usitatus Ellin6076]
Length = 131
Score = 108 bits (270), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 52/106 (49%), Positives = 73/106 (68%), Gaps = 6/106 (5%)
Query: 18 NLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAIS 77
L N ++ R NA+ PYSK VGAA+ D + TGCNVENA+YG+T+CAE+ A+ KAIS
Sbjct: 7 QLVNAALAVRLNAFAPYSKFLVGAAIEDVDGRVHTGCNVENATYGLTLCAERVAVFKAIS 66
Query: 78 EGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLI 123
EG KF+R+AV+A D+ PCG+CRQ++ EF DI++++
Sbjct: 67 EGARKFRRVAVAA---DTETLTPPCGACRQILWEFCG---DIELVL 106
>gi|423068452|ref|ZP_17057240.1| cytidine deaminase [Streptococcus intermedius F0395]
gi|355366707|gb|EHG14424.1| cytidine deaminase [Streptococcus intermedius F0395]
Length = 129
Score = 108 bits (270), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 54/113 (47%), Positives = 77/113 (68%), Gaps = 5/113 (4%)
Query: 19 LANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISE 78
L +L+I+ AY PYS +GA L+ ++ IFTG N+ENAS+G+T C E+TAI KAISE
Sbjct: 6 LIDLAIETSKKAYVPYSHFPIGAVLVAKNGQIFTGVNIENASFGLTNCGERTAIFKAISE 65
Query: 79 GQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQV 131
G T+F+ + V ++ K VSPCG+CRQV+AEF +++V +V D+S V
Sbjct: 66 GVTEFEELIVYG---ETQKPVSPCGACRQVMAEFFPQ--NLKVTLVAKDKSTV 113
>gi|152975265|ref|YP_001374782.1| cytidine deaminase [Bacillus cytotoxicus NVH 391-98]
gi|152024017|gb|ABS21787.1| cytidine deaminase [Bacillus cytotoxicus NVH 391-98]
Length = 131
Score = 108 bits (270), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 52/104 (50%), Positives = 71/104 (68%), Gaps = 3/104 (2%)
Query: 28 DNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQTKFKRIA 87
+ AY PYSK VGAAL+ ++ I+TGCN+ENASYG+ CAE+TAI KA+SEG+ F +
Sbjct: 15 EKAYIPYSKFPVGAALVTKEGKIYTGCNIENASYGLCNCAERTAIFKAVSEGERHFSYLV 74
Query: 88 VSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQV 131
V+ ++ +SPCG+CRQVIAEF P + + VK D +V
Sbjct: 75 VTG---KTDGPISPCGACRQVIAEFCDPKMPVLLTNVKGDEKEV 115
>gi|15900731|ref|NP_345335.1| cytidine deaminase [Streptococcus pneumoniae TIGR4]
gi|15902790|ref|NP_358340.1| cytidine deaminase [Streptococcus pneumoniae R6]
gi|111657485|ref|ZP_01408231.1| hypothetical protein SpneT_02001310 [Streptococcus pneumoniae
TIGR4]
gi|116516117|ref|YP_816230.1| cytidine deaminase [Streptococcus pneumoniae D39]
gi|149004049|ref|ZP_01828855.1| cytidine deaminase [Streptococcus pneumoniae SP14-BS69]
gi|149007216|ref|ZP_01830880.1| cytidine deaminase [Streptococcus pneumoniae SP18-BS74]
gi|168485790|ref|ZP_02710298.1| cytidine deaminase [Streptococcus pneumoniae CDC1087-00]
gi|168492997|ref|ZP_02717140.1| cytidine deaminase [Streptococcus pneumoniae CDC3059-06]
gi|237650834|ref|ZP_04525086.1| cytidine deaminase [Streptococcus pneumoniae CCRI 1974]
gi|237821561|ref|ZP_04597406.1| cytidine deaminase [Streptococcus pneumoniae CCRI 1974M2]
gi|387626201|ref|YP_006062374.1| cytidine deaminase [Streptococcus pneumoniae INV104]
gi|405760991|ref|YP_006701587.1| cytidine deaminase [Streptococcus pneumoniae SPNA45]
gi|417686285|ref|ZP_12335563.1| cytidine deaminase [Streptococcus pneumoniae GA41301]
gi|417698257|ref|ZP_12347430.1| cytidine deaminase [Streptococcus pneumoniae GA41317]
gi|418073619|ref|ZP_12710878.1| cytidine deaminase [Streptococcus pneumoniae GA11184]
gi|418075943|ref|ZP_12713182.1| cytidine deaminase [Streptococcus pneumoniae GA47502]
gi|418080288|ref|ZP_12717503.1| cytidine deaminase [Streptococcus pneumoniae 6735-05]
gi|418089237|ref|ZP_12726394.1| cytidine deaminase [Streptococcus pneumoniae GA43265]
gi|418095946|ref|ZP_12733061.1| cytidine deaminase [Streptococcus pneumoniae GA16531]
gi|418098212|ref|ZP_12735311.1| cytidine deaminase [Streptococcus pneumoniae 6901-05]
gi|418104892|ref|ZP_12741952.1| cytidine deaminase [Streptococcus pneumoniae GA44500]
gi|418114333|ref|ZP_12751324.1| cytidine deaminase [Streptococcus pneumoniae 5787-06]
gi|418116571|ref|ZP_12753545.1| cytidine deaminase [Streptococcus pneumoniae 6963-05]
gi|418130007|ref|ZP_12766891.1| cytidine deaminase [Streptococcus pneumoniae GA07643]
gi|418134899|ref|ZP_12771756.1| cytidine deaminase [Streptococcus pneumoniae GA11426]
gi|418143652|ref|ZP_12780452.1| cytidine deaminase [Streptococcus pneumoniae GA13494]
gi|418146064|ref|ZP_12782846.1| cytidine deaminase [Streptococcus pneumoniae GA13637]
gi|418159478|ref|ZP_12796179.1| cytidine deaminase [Streptococcus pneumoniae GA17227]
gi|418166455|ref|ZP_12803111.1| cytidine deaminase [Streptococcus pneumoniae GA17971]
gi|418173211|ref|ZP_12809825.1| cytidine deaminase [Streptococcus pneumoniae GA41277]
gi|418184664|ref|ZP_12821211.1| cytidine deaminase [Streptococcus pneumoniae GA47283]
gi|418186852|ref|ZP_12823381.1| cytidine deaminase [Streptococcus pneumoniae GA47360]
gi|418189068|ref|ZP_12825583.1| cytidine deaminase [Streptococcus pneumoniae GA47373]
gi|418216291|ref|ZP_12843015.1| cytidine deaminase [Streptococcus pneumoniae Netherlands15B-37]
gi|418229579|ref|ZP_12856186.1| cytidine deaminase [Streptococcus pneumoniae EU-NP01]
gi|419431239|ref|ZP_13971385.1| cytidine deaminase [Streptococcus pneumoniae EU-NP05]
gi|419433701|ref|ZP_13973819.1| cytidine deaminase [Streptococcus pneumoniae GA40183]
gi|419440057|ref|ZP_13980111.1| cytidine deaminase [Streptococcus pneumoniae GA40410]
gi|419442325|ref|ZP_13982356.1| cytidine deaminase [Streptococcus pneumoniae GA13224]
gi|419452962|ref|ZP_13992936.1| cytidine deaminase [Streptococcus pneumoniae EU-NP03]
gi|419457214|ref|ZP_13997160.1| cytidine deaminase [Streptococcus pneumoniae GA02254]
gi|419464482|ref|ZP_14004375.1| cytidine deaminase [Streptococcus pneumoniae GA04175]
gi|419468710|ref|ZP_14008581.1| cytidine deaminase [Streptococcus pneumoniae GA06083]
gi|419477507|ref|ZP_14017332.1| cytidine deaminase [Streptococcus pneumoniae GA18068]
gi|419495161|ref|ZP_14034879.1| cytidine deaminase [Streptococcus pneumoniae GA47461]
gi|419497022|ref|ZP_14036733.1| cytidine deaminase [Streptococcus pneumoniae GA47522]
gi|419505778|ref|ZP_14045439.1| cytidine deaminase [Streptococcus pneumoniae GA49194]
gi|419510469|ref|ZP_14050113.1| cytidine deaminase [Streptococcus pneumoniae NP141]
gi|419520778|ref|ZP_14060375.1| cytidine deaminase [Streptococcus pneumoniae GA05245]
gi|419534289|ref|ZP_14073795.1| cytidine deaminase [Streptococcus pneumoniae GA17457]
gi|421213067|ref|ZP_15670028.1| cytidine deaminase [Streptococcus pneumoniae 2070108]
gi|421215073|ref|ZP_15672003.1| cytidine deaminase [Streptococcus pneumoniae 2070109]
gi|421247100|ref|ZP_15703587.1| cytidine deaminase [Streptococcus pneumoniae 2082170]
gi|421265869|ref|ZP_15716752.1| cytidine deaminase [Streptococcus pneumoniae SPAR27]
gi|421270263|ref|ZP_15721120.1| cytidine deaminase [Streptococcus pneumoniae SPAR48]
gi|421280827|ref|ZP_15731626.1| cytidine deaminase [Streptococcus pneumoniae GA04672]
gi|421298313|ref|ZP_15749001.1| cytidine deaminase [Streptococcus pneumoniae GA60080]
gi|421303065|ref|ZP_15753729.1| cytidine deaminase [Streptococcus pneumoniae GA17484]
gi|421309274|ref|ZP_15759902.1| cytidine deaminase [Streptococcus pneumoniae GA62681]
gi|444383077|ref|ZP_21181272.1| cytidine deaminase [Streptococcus pneumoniae PCS8106]
gi|444386022|ref|ZP_21184089.1| cytidine deaminase [Streptococcus pneumoniae PCS8203]
gi|14972318|gb|AAK74975.1| cytidine deaminase [Streptococcus pneumoniae TIGR4]
gi|15458339|gb|AAK99550.1| Cytidine deaminase [Streptococcus pneumoniae R6]
gi|116076693|gb|ABJ54413.1| cytidine deaminase [Streptococcus pneumoniae D39]
gi|147757950|gb|EDK64958.1| cytidine deaminase [Streptococcus pneumoniae SP14-BS69]
gi|147761254|gb|EDK68221.1| cytidine deaminase [Streptococcus pneumoniae SP18-BS74]
gi|183570966|gb|EDT91494.1| cytidine deaminase [Streptococcus pneumoniae CDC1087-00]
gi|183576910|gb|EDT97438.1| cytidine deaminase [Streptococcus pneumoniae CDC3059-06]
gi|301793984|emb|CBW36382.1| cytidine deaminase [Streptococcus pneumoniae INV104]
gi|332076122|gb|EGI86588.1| cytidine deaminase [Streptococcus pneumoniae GA41301]
gi|332202698|gb|EGJ16767.1| cytidine deaminase [Streptococcus pneumoniae GA41317]
gi|353749732|gb|EHD30375.1| cytidine deaminase [Streptococcus pneumoniae GA47502]
gi|353750969|gb|EHD31604.1| cytidine deaminase [Streptococcus pneumoniae GA11184]
gi|353753899|gb|EHD34515.1| cytidine deaminase [Streptococcus pneumoniae 6735-05]
gi|353761923|gb|EHD42486.1| cytidine deaminase [Streptococcus pneumoniae GA43265]
gi|353769572|gb|EHD50088.1| cytidine deaminase [Streptococcus pneumoniae 6901-05]
gi|353770933|gb|EHD51444.1| cytidine deaminase [Streptococcus pneumoniae GA16531]
gi|353779326|gb|EHD59792.1| cytidine deaminase [Streptococcus pneumoniae GA44500]
gi|353787631|gb|EHD68033.1| cytidine deaminase [Streptococcus pneumoniae 5787-06]
gi|353790409|gb|EHD70792.1| cytidine deaminase [Streptococcus pneumoniae 6963-05]
gi|353803299|gb|EHD83591.1| cytidine deaminase [Streptococcus pneumoniae GA07643]
gi|353809393|gb|EHD89653.1| cytidine deaminase [Streptococcus pneumoniae GA13494]
gi|353814860|gb|EHD95082.1| cytidine deaminase [Streptococcus pneumoniae GA13637]
gi|353824714|gb|EHE04884.1| cytidine deaminase [Streptococcus pneumoniae GA17227]
gi|353830051|gb|EHE10181.1| cytidine deaminase [Streptococcus pneumoniae GA17971]
gi|353839910|gb|EHE19984.1| cytidine deaminase [Streptococcus pneumoniae GA41277]
gi|353851200|gb|EHE31196.1| cytidine deaminase [Streptococcus pneumoniae GA47283]
gi|353852677|gb|EHE32663.1| cytidine deaminase [Streptococcus pneumoniae GA47360]
gi|353856210|gb|EHE36179.1| cytidine deaminase [Streptococcus pneumoniae GA47373]
gi|353873342|gb|EHE53203.1| cytidine deaminase [Streptococcus pneumoniae Netherlands15B-37]
gi|353889765|gb|EHE69533.1| cytidine deaminase [Streptococcus pneumoniae EU-NP01]
gi|353902136|gb|EHE77666.1| cytidine deaminase [Streptococcus pneumoniae GA11426]
gi|379532700|gb|EHY97925.1| cytidine deaminase [Streptococcus pneumoniae GA02254]
gi|379539701|gb|EHZ04880.1| cytidine deaminase [Streptococcus pneumoniae GA04175]
gi|379540681|gb|EHZ05853.1| cytidine deaminase [Streptococcus pneumoniae GA05245]
gi|379546813|gb|EHZ11951.1| cytidine deaminase [Streptococcus pneumoniae GA06083]
gi|379554292|gb|EHZ19372.1| cytidine deaminase [Streptococcus pneumoniae GA13224]
gi|379566889|gb|EHZ31876.1| cytidine deaminase [Streptococcus pneumoniae GA18068]
gi|379567333|gb|EHZ32319.1| cytidine deaminase [Streptococcus pneumoniae GA17457]
gi|379576702|gb|EHZ41626.1| cytidine deaminase [Streptococcus pneumoniae GA40183]
gi|379580668|gb|EHZ45558.1| cytidine deaminase [Streptococcus pneumoniae GA40410]
gi|379595243|gb|EHZ60051.1| cytidine deaminase [Streptococcus pneumoniae GA47461]
gi|379601536|gb|EHZ66309.1| cytidine deaminase [Streptococcus pneumoniae GA47522]
gi|379607692|gb|EHZ72438.1| cytidine deaminase [Streptococcus pneumoniae GA49194]
gi|379627546|gb|EHZ92158.1| cytidine deaminase [Streptococcus pneumoniae EU-NP03]
gi|379632483|gb|EHZ97059.1| cytidine deaminase [Streptococcus pneumoniae EU-NP05]
gi|379633662|gb|EHZ98231.1| cytidine deaminase [Streptococcus pneumoniae NP141]
gi|395580654|gb|EJG41135.1| cytidine deaminase [Streptococcus pneumoniae 2070108]
gi|395581792|gb|EJG42259.1| cytidine deaminase [Streptococcus pneumoniae 2070109]
gi|395614736|gb|EJG74754.1| cytidine deaminase [Streptococcus pneumoniae 2082170]
gi|395868605|gb|EJG79722.1| cytidine deaminase [Streptococcus pneumoniae SPAR27]
gi|395870915|gb|EJG82028.1| cytidine deaminase [Streptococcus pneumoniae SPAR48]
gi|395884184|gb|EJG95226.1| cytidine deaminase [Streptococcus pneumoniae GA04672]
gi|395901687|gb|EJH12623.1| cytidine deaminase [Streptococcus pneumoniae GA17484]
gi|395902269|gb|EJH13202.1| cytidine deaminase [Streptococcus pneumoniae GA60080]
gi|395911386|gb|EJH22253.1| cytidine deaminase [Streptococcus pneumoniae GA62681]
gi|404277880|emb|CCM08441.1| cytidine deaminase [Streptococcus pneumoniae SPNA45]
gi|444248695|gb|ELU55198.1| cytidine deaminase [Streptococcus pneumoniae PCS8203]
gi|444250353|gb|ELU56833.1| cytidine deaminase [Streptococcus pneumoniae PCS8106]
Length = 129
Score = 108 bits (270), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 53/116 (45%), Positives = 76/116 (65%), Gaps = 5/116 (4%)
Query: 18 NLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAIS 77
L L+I+ +AY PYS +GA L+ +D +++TG N+ENASY +T C E+TAI KAIS
Sbjct: 5 ELIELAIETSKHAYVPYSHFPIGAVLVAKDGSVYTGVNIENASYPLTNCGERTAIFKAIS 64
Query: 78 EGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQVGL 133
EGQ +F + V + K +SPCG+CRQV+AEF D++V +V D+S V +
Sbjct: 65 EGQREFSELIVYG---QTEKPISPCGACRQVMAEFFEQ--DLKVTLVAKDKSTVEM 115
>gi|402557830|ref|YP_006599101.1| cytidine deaminase [Bacillus cereus FRI-35]
gi|401799040|gb|AFQ12899.1| cytidine deaminase [Bacillus cereus FRI-35]
Length = 131
Score = 108 bits (270), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 51/104 (49%), Positives = 72/104 (69%), Gaps = 3/104 (2%)
Query: 28 DNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQTKFKRIA 87
+ AY PYSK VGAAL+ ++ I+TGCN+ENASYG+ CAE+TAI KA+SEG+ F +
Sbjct: 15 EKAYIPYSKFPVGAALVTKEGKIYTGCNIENASYGLCNCAERTAIFKAVSEGERDFSYLV 74
Query: 88 VSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQV 131
++ +++ +SPCG+CRQVIAEF P + + VK D +V
Sbjct: 75 ITG---ETDGPISPCGACRQVIAEFCEPKMPVLLTNVKGDEKEV 115
>gi|358465115|ref|ZP_09175070.1| cytidine deaminase [Streptococcus sp. oral taxon 058 str. F0407]
gi|357066058|gb|EHI76220.1| cytidine deaminase [Streptococcus sp. oral taxon 058 str. F0407]
Length = 129
Score = 108 bits (270), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 53/115 (46%), Positives = 75/115 (65%), Gaps = 5/115 (4%)
Query: 19 LANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISE 78
L L+I+ NAY PYS +GA L+ +D +I+TG N+ENASY +T C E+TAI KA+SE
Sbjct: 6 LIELAIETSKNAYVPYSHFPIGAVLVAKDGSIYTGVNIENASYPLTNCGERTAIFKAVSE 65
Query: 79 GQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQVGL 133
GQ +F + V + K +SPCG+CRQV+ EF D++V +V D+S V +
Sbjct: 66 GQREFSELIVYG---QTEKPISPCGACRQVMVEFFEQ--DLKVTLVAKDKSTVEM 115
>gi|343525158|ref|ZP_08762114.1| cytidine deaminase [Streptococcus constellatus subsp. pharyngis
SK1060 = CCUG 46377]
gi|343397030|gb|EGV09566.1| cytidine deaminase [Streptococcus constellatus subsp. pharyngis
SK1060 = CCUG 46377]
Length = 136
Score = 108 bits (270), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 54/113 (47%), Positives = 77/113 (68%), Gaps = 5/113 (4%)
Query: 19 LANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISE 78
L +L+I+ AY PYS +GA L+ ++ IFTG N+ENAS+G+T C E+TAI KAISE
Sbjct: 6 LIDLAIETSKKAYVPYSHFPIGAVLVAKNGQIFTGVNIENASFGLTNCGERTAIFKAISE 65
Query: 79 GQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQV 131
G T+F+ + V ++ K VSPCG+CRQV+AEF +++V +V D+S V
Sbjct: 66 GVTEFEELIVYG---ETQKPVSPCGACRQVMAEFFPQ--NLKVTLVAKDKSTV 113
>gi|311069131|ref|YP_003974054.1| cytidine deaminase [Bacillus atrophaeus 1942]
gi|419820221|ref|ZP_14343833.1| cytidine/deoxycytidine deaminase [Bacillus atrophaeus C89]
gi|310869648|gb|ADP33123.1| cytidine deaminase [Bacillus atrophaeus 1942]
gi|388475633|gb|EIM12344.1| cytidine/deoxycytidine deaminase [Bacillus atrophaeus C89]
Length = 136
Score = 108 bits (269), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 54/108 (50%), Positives = 75/108 (69%), Gaps = 7/108 (6%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
Q L + +++ARD AY PYSK +VGAALL D ++ GCN+ENA+Y + CAE+TA+ KA+
Sbjct: 4 QELISEALRARDLAYVPYSKFKVGAALLTTDGKVYRGCNIENAAYSLCNCAERTALFKAV 63
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIV 124
SEG T+F+ AV+A P VSPCG+CRQVI+E C +L++
Sbjct: 64 SEGDTEFQMFAVAADTPGP---VSPCGACRQVISEL----CKKDMLVI 104
>gi|423377841|ref|ZP_17355125.1| cytidine deaminase [Bacillus cereus BAG1O-2]
gi|423440949|ref|ZP_17417855.1| cytidine deaminase [Bacillus cereus BAG4X2-1]
gi|423448883|ref|ZP_17425762.1| cytidine deaminase [Bacillus cereus BAG5O-1]
gi|423464014|ref|ZP_17440782.1| cytidine deaminase [Bacillus cereus BAG6O-1]
gi|423533377|ref|ZP_17509795.1| cytidine deaminase [Bacillus cereus HuB2-9]
gi|423541368|ref|ZP_17517759.1| cytidine deaminase [Bacillus cereus HuB4-10]
gi|423547604|ref|ZP_17523962.1| cytidine deaminase [Bacillus cereus HuB5-5]
gi|423615357|ref|ZP_17591191.1| cytidine deaminase [Bacillus cereus VD115]
gi|423622611|ref|ZP_17598389.1| cytidine deaminase [Bacillus cereus VD148]
gi|401129477|gb|EJQ37160.1| cytidine deaminase [Bacillus cereus BAG5O-1]
gi|401172556|gb|EJQ79777.1| cytidine deaminase [Bacillus cereus HuB4-10]
gi|401179325|gb|EJQ86498.1| cytidine deaminase [Bacillus cereus HuB5-5]
gi|401260731|gb|EJR66899.1| cytidine deaminase [Bacillus cereus VD148]
gi|401261036|gb|EJR67203.1| cytidine deaminase [Bacillus cereus VD115]
gi|401636107|gb|EJS53861.1| cytidine deaminase [Bacillus cereus BAG1O-2]
gi|402417610|gb|EJV49910.1| cytidine deaminase [Bacillus cereus BAG4X2-1]
gi|402420281|gb|EJV52552.1| cytidine deaminase [Bacillus cereus BAG6O-1]
gi|402463596|gb|EJV95296.1| cytidine deaminase [Bacillus cereus HuB2-9]
Length = 132
Score = 108 bits (269), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 53/96 (55%), Positives = 67/96 (69%), Gaps = 3/96 (3%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
+ L +I+AR AY PYSK QVGAALL D ++ GCNVENASYG+ CAE+TA+ KA+
Sbjct: 4 KQLIQEAIEARKQAYVPYSKFQVGAALLTHDGKVYRGCNVENASYGLCNCAERTALFKAV 63
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEF 112
SEG +F IAV A D+ + V PCG+CRQV+ E
Sbjct: 64 SEGDKEFVAIAVVA---DTKRPVPPCGACRQVMVEL 96
>gi|229098772|ref|ZP_04229710.1| Cytidine deaminase [Bacillus cereus Rock3-29]
gi|229104932|ref|ZP_04235589.1| Cytidine deaminase [Bacillus cereus Rock3-28]
gi|229117797|ref|ZP_04247162.1| Cytidine deaminase [Bacillus cereus Rock1-3]
gi|407706828|ref|YP_006830413.1| post-transcriptional regulator [Bacillus thuringiensis MC28]
gi|228665660|gb|EEL21137.1| Cytidine deaminase [Bacillus cereus Rock1-3]
gi|228678506|gb|EEL32726.1| Cytidine deaminase [Bacillus cereus Rock3-28]
gi|228684616|gb|EEL38556.1| Cytidine deaminase [Bacillus cereus Rock3-29]
gi|407384513|gb|AFU15014.1| Cytidine deaminase [Bacillus thuringiensis MC28]
Length = 135
Score = 108 bits (269), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 53/96 (55%), Positives = 67/96 (69%), Gaps = 3/96 (3%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
+ L +I+AR AY PYSK QVGAALL D ++ GCNVENASYG+ CAE+TA+ KA+
Sbjct: 7 KQLIQEAIEARKQAYVPYSKFQVGAALLTHDGKVYRGCNVENASYGLCNCAERTALFKAV 66
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEF 112
SEG +F IAV A D+ + V PCG+CRQV+ E
Sbjct: 67 SEGDKEFVAIAVVA---DTKRPVPPCGACRQVMVEL 99
>gi|431235021|ref|ZP_19503044.1| cytidine deaminase [Enterococcus faecium E1622]
gi|430572881|gb|ELB11717.1| cytidine deaminase [Enterococcus faecium E1622]
Length = 132
Score = 108 bits (269), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 51/108 (47%), Positives = 71/108 (65%), Gaps = 3/108 (2%)
Query: 15 IEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISK 74
++Q N +I+A D AY PYS VGA L+ + I+ G N+ENAS+G+T CAE+TA K
Sbjct: 4 LKQEWINTAIEALDKAYVPYSHFPVGACLVTESGKIYQGINIENASFGLTNCAERTAFFK 63
Query: 75 AISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVL 122
A+SEG+ F + V+ PD +SPCG+CRQV+AEF SP + +L
Sbjct: 64 AVSEGEKTFTHLVVAGHTPDP---ISPCGACRQVMAEFCSPDMPVTLL 108
>gi|306825051|ref|ZP_07458393.1| cytidine deaminase [Streptococcus sp. oral taxon 071 str. 73H25AP]
gi|304432487|gb|EFM35461.1| cytidine deaminase [Streptococcus sp. oral taxon 071 str. 73H25AP]
Length = 129
Score = 108 bits (269), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 53/116 (45%), Positives = 75/116 (64%), Gaps = 5/116 (4%)
Query: 18 NLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAIS 77
L L+I+ AY PYS +GA L+ +D +I+TG N+ENASY +T C E+TAI KA+S
Sbjct: 5 ELIELAIETSKQAYVPYSHFPIGAVLVAKDGSIYTGVNIENASYSLTNCGERTAIFKAVS 64
Query: 78 EGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQVGL 133
EGQ +F + V + K +SPCG+CRQV+AEF D++V +V D+S V +
Sbjct: 65 EGQREFSELIVYG---QTEKPISPCGACRQVMAEFFEQ--DLKVTLVAKDKSTVEM 115
>gi|452975096|gb|EME74915.1| cytidine/deoxycytidine deaminase [Bacillus sonorensis L12]
Length = 136
Score = 108 bits (269), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 53/99 (53%), Positives = 72/99 (72%), Gaps = 3/99 (3%)
Query: 16 EQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKA 75
+Q L +++AR+ AY PYSK +VGAALL +D ++ GCN+ENA+Y + CAE+TA+ KA
Sbjct: 3 KQELIAEALKARELAYVPYSKFKVGAALLTEDGKVYKGCNIENAAYSLCNCAERTALFKA 62
Query: 76 ISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSS 114
SEG FK +AV+A D+ + VSPCG+CRQVIAE S
Sbjct: 63 YSEGDKAFKMLAVAA---DTPRPVSPCGACRQVIAELCS 98
>gi|42781047|ref|NP_978294.1| cytidine deaminase [Bacillus cereus ATCC 10987]
gi|42736968|gb|AAS40902.1| cytidine deaminase [Bacillus cereus ATCC 10987]
Length = 131
Score = 108 bits (269), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 51/104 (49%), Positives = 72/104 (69%), Gaps = 3/104 (2%)
Query: 28 DNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQTKFKRIA 87
+ AY PYSK VGAAL+ ++ I+TGCN+ENASYG+ CAE+TAI KA+SEG+ F +
Sbjct: 15 EKAYIPYSKFPVGAALVTKEGKIYTGCNIENASYGLCNCAERTAIFKAVSEGERDFSYLV 74
Query: 88 VSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQV 131
++ +++ +SPCG+CRQVIAEF P + + VK D +V
Sbjct: 75 ITG---ETDGPISPCGACRQVIAEFCEPKMPVLLTNVKGDEKEV 115
>gi|69248163|ref|ZP_00604652.1| Cytidine deaminase, homotetrameric [Enterococcus faecium DO]
gi|257878709|ref|ZP_05658362.1| cytidine deaminase [Enterococcus faecium 1,230,933]
gi|257881350|ref|ZP_05661003.1| cytidine deaminase [Enterococcus faecium 1,231,502]
gi|257890568|ref|ZP_05670221.1| cytidine deaminase [Enterococcus faecium 1,231,410]
gi|260558269|ref|ZP_05830465.1| cytidine deaminase [Enterococcus faecium C68]
gi|293562929|ref|ZP_06677396.1| cytidine deaminase [Enterococcus faecium E1162]
gi|293567947|ref|ZP_06679288.1| cytidine deaminase [Enterococcus faecium E1071]
gi|294623800|ref|ZP_06702628.1| cytidine deaminase [Enterococcus faecium U0317]
gi|314937591|ref|ZP_07844917.1| cytidine deaminase [Enterococcus faecium TX0133a04]
gi|314942910|ref|ZP_07849723.1| cytidine deaminase [Enterococcus faecium TX0133C]
gi|314947954|ref|ZP_07851358.1| cytidine deaminase [Enterococcus faecium TX0082]
gi|314950870|ref|ZP_07853939.1| cytidine deaminase [Enterococcus faecium TX0133A]
gi|314991481|ref|ZP_07856958.1| cytidine deaminase [Enterococcus faecium TX0133B]
gi|314994999|ref|ZP_07860119.1| cytidine deaminase [Enterococcus faecium TX0133a01]
gi|383327399|ref|YP_005353283.1| cytidine deaminase [Enterococcus faecium Aus0004]
gi|389867223|ref|YP_006374646.1| cytidine deaminase [Enterococcus faecium DO]
gi|406580806|ref|ZP_11055994.1| cytidine deaminase [Enterococcus sp. GMD4E]
gi|406582836|ref|ZP_11057933.1| cytidine deaminase [Enterococcus sp. GMD3E]
gi|406585056|ref|ZP_11060051.1| cytidine deaminase [Enterococcus sp. GMD2E]
gi|406590592|ref|ZP_11064954.1| cytidine deaminase [Enterococcus sp. GMD1E]
gi|410936001|ref|ZP_11367873.1| cytidine deaminase [Enterococcus sp. GMD5E]
gi|416132170|ref|ZP_11597860.1| cytidine deaminase [Enterococcus faecium E4452]
gi|424791137|ref|ZP_18217618.1| cytidine deaminase [Enterococcus faecium V689]
gi|424797511|ref|ZP_18223095.1| cytidine deaminase [Enterococcus faecium S447]
gi|424828300|ref|ZP_18253036.1| cytidine deaminase [Enterococcus faecium R501]
gi|424854904|ref|ZP_18279247.1| cytidine deaminase [Enterococcus faecium R499]
gi|424866458|ref|ZP_18290296.1| cytidine deaminase [Enterococcus faecium R497]
gi|424950268|ref|ZP_18365439.1| cytidine deaminase [Enterococcus faecium R496]
gi|424954407|ref|ZP_18369309.1| cytidine deaminase [Enterococcus faecium R494]
gi|424958494|ref|ZP_18373140.1| cytidine deaminase [Enterococcus faecium R446]
gi|424959930|ref|ZP_18374487.1| cytidine deaminase [Enterococcus faecium P1986]
gi|424962873|ref|ZP_18377172.1| cytidine deaminase [Enterococcus faecium P1190]
gi|424969452|ref|ZP_18383022.1| cytidine deaminase [Enterococcus faecium P1140]
gi|424969758|ref|ZP_18383309.1| cytidine deaminase [Enterococcus faecium P1139]
gi|424974045|ref|ZP_18387297.1| cytidine deaminase [Enterococcus faecium P1137]
gi|424976596|ref|ZP_18389674.1| cytidine deaminase [Enterococcus faecium P1123]
gi|424981017|ref|ZP_18393770.1| cytidine deaminase [Enterococcus faecium ERV99]
gi|424984530|ref|ZP_18397058.1| cytidine deaminase [Enterococcus faecium ERV69]
gi|424987390|ref|ZP_18399765.1| cytidine deaminase [Enterococcus faecium ERV38]
gi|424990842|ref|ZP_18403032.1| cytidine deaminase [Enterococcus faecium ERV26]
gi|424994499|ref|ZP_18406434.1| cytidine deaminase [Enterococcus faecium ERV168]
gi|424997328|ref|ZP_18409091.1| cytidine deaminase [Enterococcus faecium ERV165]
gi|425001349|ref|ZP_18412868.1| cytidine deaminase [Enterococcus faecium ERV161]
gi|425004051|ref|ZP_18415381.1| cytidine deaminase [Enterococcus faecium ERV102]
gi|425006845|ref|ZP_18418000.1| cytidine deaminase [Enterococcus faecium ERV1]
gi|425010991|ref|ZP_18421915.1| cytidine deaminase [Enterococcus faecium E422]
gi|425014096|ref|ZP_18424791.1| cytidine deaminase [Enterococcus faecium E417]
gi|425017929|ref|ZP_18428410.1| cytidine deaminase [Enterococcus faecium C621]
gi|425020939|ref|ZP_18431226.1| cytidine deaminase [Enterococcus faecium C497]
gi|425030556|ref|ZP_18435729.1| cytidine deaminase [Enterococcus faecium C1904]
gi|425030976|ref|ZP_18436124.1| cytidine deaminase [Enterococcus faecium 515]
gi|425035520|ref|ZP_18440355.1| cytidine deaminase [Enterococcus faecium 514]
gi|425038327|ref|ZP_18442946.1| cytidine deaminase [Enterococcus faecium 513]
gi|425041695|ref|ZP_18446078.1| cytidine deaminase [Enterococcus faecium 511]
gi|425046397|ref|ZP_18450415.1| cytidine deaminase [Enterococcus faecium 510]
gi|425048489|ref|ZP_18452389.1| cytidine deaminase [Enterococcus faecium 509]
gi|425051580|ref|ZP_18455237.1| cytidine deaminase [Enterococcus faecium 506]
gi|425060517|ref|ZP_18463811.1| cytidine deaminase [Enterococcus faecium 503]
gi|427396921|ref|ZP_18889547.1| cytidine deaminase [Enterococcus durans FB129-CNAB-4]
gi|430831803|ref|ZP_19449851.1| cytidine deaminase [Enterococcus faecium E0333]
gi|430843037|ref|ZP_19460939.1| cytidine deaminase [Enterococcus faecium E1050]
gi|430848202|ref|ZP_19466028.1| cytidine deaminase [Enterococcus faecium E1133]
gi|430855766|ref|ZP_19473472.1| cytidine deaminase [Enterococcus faecium E1392]
gi|430861215|ref|ZP_19478804.1| cytidine deaminase [Enterococcus faecium E1573]
gi|430952258|ref|ZP_19486301.1| cytidine deaminase [Enterococcus faecium E1576]
gi|430999141|ref|ZP_19488109.1| cytidine deaminase [Enterococcus faecium E1578]
gi|431255595|ref|ZP_19504718.1| cytidine deaminase [Enterococcus faecium E1623]
gi|431303559|ref|ZP_19508406.1| cytidine deaminase [Enterococcus faecium E1626]
gi|431545092|ref|ZP_19518733.1| cytidine deaminase [Enterococcus faecium E1731]
gi|431695845|ref|ZP_19524739.1| cytidine deaminase [Enterococcus faecium E1904]
gi|431749442|ref|ZP_19538183.1| cytidine deaminase [Enterococcus faecium E2297]
gi|431755955|ref|ZP_19544597.1| cytidine deaminase [Enterococcus faecium E2883]
gi|431768090|ref|ZP_19556531.1| cytidine deaminase [Enterococcus faecium E1321]
gi|431769405|ref|ZP_19557815.1| cytidine deaminase [Enterococcus faecium E1644]
gi|431774590|ref|ZP_19562897.1| cytidine deaminase [Enterococcus faecium E2369]
gi|431777575|ref|ZP_19565828.1| cytidine deaminase [Enterococcus faecium E2560]
gi|431782479|ref|ZP_19570612.1| cytidine deaminase [Enterococcus faecium E6012]
gi|431784300|ref|ZP_19572342.1| cytidine deaminase [Enterococcus faecium E6045]
gi|447911562|ref|YP_007392974.1| Cytidine deaminase [Enterococcus faecium NRRL B-2354]
gi|68194529|gb|EAN09024.1| Cytidine deaminase, homotetrameric [Enterococcus faecium DO]
gi|257812937|gb|EEV41695.1| cytidine deaminase [Enterococcus faecium 1,230,933]
gi|257817008|gb|EEV44336.1| cytidine deaminase [Enterococcus faecium 1,231,502]
gi|257826928|gb|EEV53554.1| cytidine deaminase [Enterococcus faecium 1,231,410]
gi|260075443|gb|EEW63749.1| cytidine deaminase [Enterococcus faecium C68]
gi|291589532|gb|EFF21339.1| cytidine deaminase [Enterococcus faecium E1071]
gi|291596754|gb|EFF27977.1| cytidine deaminase [Enterococcus faecium U0317]
gi|291605055|gb|EFF34522.1| cytidine deaminase [Enterococcus faecium E1162]
gi|313590725|gb|EFR69570.1| cytidine deaminase [Enterococcus faecium TX0133a01]
gi|313593961|gb|EFR72806.1| cytidine deaminase [Enterococcus faecium TX0133B]
gi|313596879|gb|EFR75724.1| cytidine deaminase [Enterococcus faecium TX0133A]
gi|313598382|gb|EFR77227.1| cytidine deaminase [Enterococcus faecium TX0133C]
gi|313642968|gb|EFS07548.1| cytidine deaminase [Enterococcus faecium TX0133a04]
gi|313645552|gb|EFS10132.1| cytidine deaminase [Enterococcus faecium TX0082]
gi|364093436|gb|EHM35710.1| cytidine deaminase [Enterococcus faecium E4452]
gi|378937093|gb|AFC62165.1| cytidine deaminase [Enterococcus faecium Aus0004]
gi|388532472|gb|AFK57664.1| cytidine deaminase [Enterococcus faecium DO]
gi|402920001|gb|EJX40556.1| cytidine deaminase [Enterococcus faecium V689]
gi|402921067|gb|EJX41537.1| cytidine deaminase [Enterococcus faecium S447]
gi|402922712|gb|EJX43064.1| cytidine deaminase [Enterococcus faecium R501]
gi|402932062|gb|EJX51597.1| cytidine deaminase [Enterococcus faecium R499]
gi|402933557|gb|EJX52983.1| cytidine deaminase [Enterococcus faecium R496]
gi|402936854|gb|EJX56001.1| cytidine deaminase [Enterococcus faecium R494]
gi|402938776|gb|EJX57754.1| cytidine deaminase [Enterococcus faecium R497]
gi|402940120|gb|EJX58977.1| cytidine deaminase [Enterococcus faecium R446]
gi|402948422|gb|EJX66559.1| cytidine deaminase [Enterococcus faecium P1140]
gi|402949308|gb|EJX67378.1| cytidine deaminase [Enterococcus faecium P1986]
gi|402950924|gb|EJX68894.1| cytidine deaminase [Enterococcus faecium P1190]
gi|402957392|gb|EJX74783.1| cytidine deaminase [Enterococcus faecium P1137]
gi|402963401|gb|EJX80269.1| cytidine deaminase [Enterococcus faecium P1139]
gi|402964631|gb|EJX81399.1| cytidine deaminase [Enterococcus faecium ERV99]
gi|402968477|gb|EJX84956.1| cytidine deaminase [Enterococcus faecium ERV69]
gi|402969125|gb|EJX85562.1| cytidine deaminase [Enterococcus faecium P1123]
gi|402974382|gb|EJX90434.1| cytidine deaminase [Enterococcus faecium ERV38]
gi|402978531|gb|EJX94268.1| cytidine deaminase [Enterococcus faecium ERV26]
gi|402979926|gb|EJX95565.1| cytidine deaminase [Enterococcus faecium ERV168]
gi|402986442|gb|EJY01565.1| cytidine deaminase [Enterococcus faecium ERV165]
gi|402986906|gb|EJY02005.1| cytidine deaminase [Enterococcus faecium ERV161]
gi|402990704|gb|EJY05569.1| cytidine deaminase [Enterococcus faecium ERV102]
gi|402996177|gb|EJY10577.1| cytidine deaminase [Enterococcus faecium ERV1]
gi|402998198|gb|EJY12463.1| cytidine deaminase [Enterococcus faecium E422]
gi|402999600|gb|EJY13783.1| cytidine deaminase [Enterococcus faecium E417]
gi|403002789|gb|EJY16735.1| cytidine deaminase [Enterococcus faecium C1904]
gi|403003447|gb|EJY17347.1| cytidine deaminase [Enterococcus faecium C621]
gi|403008117|gb|EJY21646.1| cytidine deaminase [Enterococcus faecium C497]
gi|403016603|gb|EJY29413.1| cytidine deaminase [Enterococcus faecium 515]
gi|403017774|gb|EJY30498.1| cytidine deaminase [Enterococcus faecium 514]
gi|403019693|gb|EJY32276.1| cytidine deaminase [Enterococcus faecium 513]
gi|403024398|gb|EJY36563.1| cytidine deaminase [Enterococcus faecium 510]
gi|403025476|gb|EJY37554.1| cytidine deaminase [Enterococcus faecium 511]
gi|403030571|gb|EJY42251.1| cytidine deaminase [Enterococcus faecium 509]
gi|403037318|gb|EJY48612.1| cytidine deaminase [Enterococcus faecium 506]
gi|403042561|gb|EJY53508.1| cytidine deaminase [Enterococcus faecium 503]
gi|404453437|gb|EKA00493.1| cytidine deaminase [Enterococcus sp. GMD4E]
gi|404457573|gb|EKA04110.1| cytidine deaminase [Enterococcus sp. GMD3E]
gi|404463038|gb|EKA08736.1| cytidine deaminase [Enterococcus sp. GMD2E]
gi|404469121|gb|EKA13951.1| cytidine deaminase [Enterococcus sp. GMD1E]
gi|410735592|gb|EKQ77501.1| cytidine deaminase [Enterococcus sp. GMD5E]
gi|425722668|gb|EKU85562.1| cytidine deaminase [Enterococcus durans FB129-CNAB-4]
gi|430480444|gb|ELA57618.1| cytidine deaminase [Enterococcus faecium E0333]
gi|430498091|gb|ELA74099.1| cytidine deaminase [Enterococcus faecium E1050]
gi|430535545|gb|ELA75945.1| cytidine deaminase [Enterococcus faecium E1133]
gi|430546308|gb|ELA86270.1| cytidine deaminase [Enterococcus faecium E1392]
gi|430550248|gb|ELA90045.1| cytidine deaminase [Enterococcus faecium E1573]
gi|430557393|gb|ELA96852.1| cytidine deaminase [Enterococcus faecium E1576]
gi|430563248|gb|ELB02477.1| cytidine deaminase [Enterococcus faecium E1578]
gi|430577793|gb|ELB16373.1| cytidine deaminase [Enterococcus faecium E1623]
gi|430580200|gb|ELB18680.1| cytidine deaminase [Enterococcus faecium E1626]
gi|430592140|gb|ELB30162.1| cytidine deaminase [Enterococcus faecium E1731]
gi|430597798|gb|ELB35580.1| cytidine deaminase [Enterococcus faecium E1904]
gi|430611571|gb|ELB48652.1| cytidine deaminase [Enterococcus faecium E2297]
gi|430616070|gb|ELB52995.1| cytidine deaminase [Enterococcus faecium E2883]
gi|430629819|gb|ELB66207.1| cytidine deaminase [Enterococcus faecium E1321]
gi|430633995|gb|ELB70140.1| cytidine deaminase [Enterococcus faecium E2369]
gi|430636980|gb|ELB73024.1| cytidine deaminase [Enterococcus faecium E1644]
gi|430639189|gb|ELB75070.1| cytidine deaminase [Enterococcus faecium E2560]
gi|430647116|gb|ELB82564.1| cytidine deaminase [Enterococcus faecium E6012]
gi|430649874|gb|ELB85241.1| cytidine deaminase [Enterococcus faecium E6045]
gi|445187271|gb|AGE28913.1| Cytidine deaminase [Enterococcus faecium NRRL B-2354]
Length = 132
Score = 108 bits (269), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 53/110 (48%), Positives = 73/110 (66%), Gaps = 5/110 (4%)
Query: 15 IEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISK 74
++Q N +I+A D AY PYS VGA L+ + I+ G N+ENAS+G+T CAE+TA K
Sbjct: 4 LKQEWINTAIEALDKAYVPYSHFPVGACLVTESGKIYQGINIENASFGLTNCAERTAFFK 63
Query: 75 AISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIV 124
A+SEG+ F + V+ PD +SPCG+CRQV+AEF SP D+ V +V
Sbjct: 64 AVSEGEKTFTHLVVAGHTPDP---ISPCGACRQVMAEFCSP--DMPVTLV 108
>gi|257885618|ref|ZP_05665271.1| cytidine deaminase [Enterococcus faecium 1,231,501]
gi|261206975|ref|ZP_05921664.1| cytidine deaminase [Enterococcus faecium TC 6]
gi|289565388|ref|ZP_06445838.1| cytidine deaminase [Enterococcus faecium D344SRF]
gi|294615410|ref|ZP_06695283.1| cytidine deaminase [Enterococcus faecium E1636]
gi|294618337|ref|ZP_06697918.1| cytidine deaminase [Enterococcus faecium E1679]
gi|415890883|ref|ZP_11549605.1| cytidine deaminase [Enterococcus faecium E4453]
gi|425058285|ref|ZP_18461671.1| cytidine deaminase [Enterococcus faecium 504]
gi|430820826|ref|ZP_19439447.1| cytidine deaminase [Enterococcus faecium E0045]
gi|430823255|ref|ZP_19441827.1| cytidine deaminase [Enterococcus faecium E0120]
gi|430828755|ref|ZP_19446870.1| cytidine deaminase [Enterococcus faecium E0269]
gi|430834892|ref|ZP_19452894.1| cytidine deaminase [Enterococcus faecium E0679]
gi|430836350|ref|ZP_19454331.1| cytidine deaminase [Enterococcus faecium E0680]
gi|430839278|ref|ZP_19457219.1| cytidine deaminase [Enterococcus faecium E0688]
gi|430850681|ref|ZP_19468438.1| cytidine deaminase [Enterococcus faecium E1185]
gi|430859027|ref|ZP_19476645.1| cytidine deaminase [Enterococcus faecium E1552]
gi|430866288|ref|ZP_19481565.1| cytidine deaminase [Enterococcus faecium E1574]
gi|431380531|ref|ZP_19510912.1| cytidine deaminase [Enterococcus faecium E1627]
gi|431506914|ref|ZP_19515740.1| cytidine deaminase [Enterococcus faecium E1634]
gi|431743949|ref|ZP_19532822.1| cytidine deaminase [Enterococcus faecium E2071]
gi|431747254|ref|ZP_19536053.1| cytidine deaminase [Enterococcus faecium E2134]
gi|431779718|ref|ZP_19567910.1| cytidine deaminase [Enterococcus faecium E4389]
gi|257821474|gb|EEV48604.1| cytidine deaminase [Enterococcus faecium 1,231,501]
gi|260078603|gb|EEW66305.1| cytidine deaminase [Enterococcus faecium TC 6]
gi|289162878|gb|EFD10728.1| cytidine deaminase [Enterococcus faecium D344SRF]
gi|291591784|gb|EFF23420.1| cytidine deaminase [Enterococcus faecium E1636]
gi|291595431|gb|EFF26743.1| cytidine deaminase [Enterococcus faecium E1679]
gi|364094285|gb|EHM36475.1| cytidine deaminase [Enterococcus faecium E4453]
gi|403038815|gb|EJY50012.1| cytidine deaminase [Enterococcus faecium 504]
gi|430439086|gb|ELA49464.1| cytidine deaminase [Enterococcus faecium E0045]
gi|430442353|gb|ELA52398.1| cytidine deaminase [Enterococcus faecium E0120]
gi|430482739|gb|ELA59840.1| cytidine deaminase [Enterococcus faecium E0269]
gi|430484961|gb|ELA61908.1| cytidine deaminase [Enterococcus faecium E0679]
gi|430488477|gb|ELA65148.1| cytidine deaminase [Enterococcus faecium E0680]
gi|430490736|gb|ELA67232.1| cytidine deaminase [Enterococcus faecium E0688]
gi|430535040|gb|ELA75463.1| cytidine deaminase [Enterococcus faecium E1185]
gi|430544546|gb|ELA84575.1| cytidine deaminase [Enterococcus faecium E1552]
gi|430551516|gb|ELA91267.1| cytidine deaminase [Enterococcus faecium E1574]
gi|430582399|gb|ELB20826.1| cytidine deaminase [Enterococcus faecium E1627]
gi|430587301|gb|ELB25534.1| cytidine deaminase [Enterococcus faecium E1634]
gi|430606012|gb|ELB43384.1| cytidine deaminase [Enterococcus faecium E2071]
gi|430606783|gb|ELB44121.1| cytidine deaminase [Enterococcus faecium E2134]
gi|430641480|gb|ELB77282.1| cytidine deaminase [Enterococcus faecium E4389]
Length = 132
Score = 108 bits (269), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 53/110 (48%), Positives = 73/110 (66%), Gaps = 5/110 (4%)
Query: 15 IEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISK 74
++Q N +I+A D AY PYS VGA L+ + I+ G N+ENAS+G+T CAE+TA K
Sbjct: 4 LKQEWINTAIEALDKAYVPYSHFPVGACLVTESGKIYQGINIENASFGLTNCAERTAFFK 63
Query: 75 AISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIV 124
A+SEG+ F + V+ PD +SPCG+CRQV+AEF SP D+ V +V
Sbjct: 64 AVSEGEKTFTHLVVAGHTPDP---ISPCGACRQVMAEFCSP--DMPVTLV 108
>gi|373116284|ref|ZP_09530439.1| cytidine deaminase [Lachnospiraceae bacterium 7_1_58FAA]
gi|371669537|gb|EHO34637.1| cytidine deaminase [Lachnospiraceae bacterium 7_1_58FAA]
Length = 131
Score = 108 bits (269), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 58/119 (48%), Positives = 77/119 (64%), Gaps = 7/119 (5%)
Query: 16 EQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKA 75
+Q L L+ + +Y PYS VGAAL C D T+FTGCNVENA+YG +ICAE+TA+ KA
Sbjct: 3 DQELVELAFTMLERSYVPYSHFPVGAALECADGTVFTGCNVENAAYGSSICAERTALVKA 62
Query: 76 ISEGQT-KFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQVGL 133
+SEG F RIAV + +S + PCG+CRQ++ EF A + VL+ + D S V L
Sbjct: 63 VSEGHRDDFTRIAV---VGNSTEPCWPCGACRQMLYEF---APGLTVLVAQRDHSFVKL 115
>gi|228960566|ref|ZP_04122215.1| Cytidine deaminase [Bacillus thuringiensis serovar pakistani str.
T13001]
gi|423631023|ref|ZP_17606770.1| cytidine deaminase [Bacillus cereus VD154]
gi|228799166|gb|EEM46134.1| Cytidine deaminase [Bacillus thuringiensis serovar pakistani str.
T13001]
gi|401264390|gb|EJR70502.1| cytidine deaminase [Bacillus cereus VD154]
Length = 132
Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 52/90 (57%), Positives = 66/90 (73%), Gaps = 3/90 (3%)
Query: 23 SIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQTK 82
+I+AR AY PYSK QVGAALL +D ++ GCNVENASYG+ CAE+TA+ KA+SEG +
Sbjct: 10 AIEARKQAYVPYSKFQVGAALLTRDGKVYRGCNVENASYGLCNCAERTALFKAVSEGDNE 69
Query: 83 FKRIAVSAILPDSNKFVSPCGSCRQVIAEF 112
F IAV A D+ + V PCG+CRQV+ E
Sbjct: 70 FVAIAVVA---DTKRPVPPCGACRQVMVEL 96
>gi|229048020|ref|ZP_04193596.1| Cytidine deaminase [Bacillus cereus AH676]
gi|229111774|ref|ZP_04241322.1| Cytidine deaminase [Bacillus cereus Rock1-15]
gi|229146886|ref|ZP_04275251.1| Cytidine deaminase [Bacillus cereus BDRD-ST24]
gi|296504795|ref|YP_003666495.1| cytidine deaminase [Bacillus thuringiensis BMB171]
gi|423640618|ref|ZP_17616236.1| cytidine deaminase [Bacillus cereus VD166]
gi|423650166|ref|ZP_17625736.1| cytidine deaminase [Bacillus cereus VD169]
gi|423657257|ref|ZP_17632556.1| cytidine deaminase [Bacillus cereus VD200]
gi|228636714|gb|EEK93179.1| Cytidine deaminase [Bacillus cereus BDRD-ST24]
gi|228671768|gb|EEL27064.1| Cytidine deaminase [Bacillus cereus Rock1-15]
gi|228723477|gb|EEL74846.1| Cytidine deaminase [Bacillus cereus AH676]
gi|296325847|gb|ADH08775.1| cytidine deaminase [Bacillus thuringiensis BMB171]
gi|401279679|gb|EJR85601.1| cytidine deaminase [Bacillus cereus VD166]
gi|401282584|gb|EJR88483.1| cytidine deaminase [Bacillus cereus VD169]
gi|401290000|gb|EJR95704.1| cytidine deaminase [Bacillus cereus VD200]
Length = 132
Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 52/90 (57%), Positives = 66/90 (73%), Gaps = 3/90 (3%)
Query: 23 SIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQTK 82
+I+AR AY PYSK QVGAALL +D ++ GCNVENASYG+ CAE+TA+ KA+SEG +
Sbjct: 10 AIEARKQAYVPYSKFQVGAALLTRDGKVYRGCNVENASYGLCNCAERTALFKAVSEGDNE 69
Query: 83 FKRIAVSAILPDSNKFVSPCGSCRQVIAEF 112
F IAV A D+ + V PCG+CRQV+ E
Sbjct: 70 FVAIAVVA---DTKRPVPPCGACRQVMVEL 96
>gi|423397392|ref|ZP_17374593.1| cytidine deaminase [Bacillus cereus BAG2X1-1]
gi|423408249|ref|ZP_17385398.1| cytidine deaminase [Bacillus cereus BAG2X1-3]
gi|401649438|gb|EJS67016.1| cytidine deaminase [Bacillus cereus BAG2X1-1]
gi|401657928|gb|EJS75432.1| cytidine deaminase [Bacillus cereus BAG2X1-3]
Length = 131
Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 51/103 (49%), Positives = 72/103 (69%), Gaps = 3/103 (2%)
Query: 29 NAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQTKFKRIAV 88
AY PYSK VGAAL+ ++ I+TGCN+ENASYG+ CAE+TAI KA+SEG+ +F + +
Sbjct: 16 KAYIPYSKFPVGAALVTKEGKIYTGCNIENASYGLCNCAERTAIFKAVSEGEREFSYLVI 75
Query: 89 SAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQV 131
+ +++ +SPCG+CRQVIAEF P + + VK D +V
Sbjct: 76 TG---ETDGPISPCGACRQVIAEFCDPEMPVLLTNVKGDEKEV 115
>gi|365841689|ref|ZP_09382748.1| cytidine deaminase [Flavonifractor plautii ATCC 29863]
gi|364577175|gb|EHM54460.1| cytidine deaminase [Flavonifractor plautii ATCC 29863]
Length = 131
Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 58/119 (48%), Positives = 77/119 (64%), Gaps = 7/119 (5%)
Query: 16 EQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKA 75
+Q L L+ + +Y PYS VGAAL C D T+FTGCNVENA+YG +ICAE+TA+ KA
Sbjct: 3 DQELVELAFTMLERSYVPYSHFPVGAALECADGTVFTGCNVENAAYGSSICAERTALVKA 62
Query: 76 ISEGQT-KFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQVGL 133
+SEG F RIAV + +S + PCG+CRQ++ EF A + VL+ + D S V L
Sbjct: 63 VSEGHRDDFTRIAV---VGNSTEPCWPCGACRQMLYEF---APGLTVLVAQRDHSFVKL 115
>gi|228985026|ref|ZP_04145194.1| Cytidine deaminase [Bacillus thuringiensis serovar tochigiensis
BGSC 4Y1]
gi|228774714|gb|EEM23112.1| Cytidine deaminase [Bacillus thuringiensis serovar tochigiensis
BGSC 4Y1]
Length = 131
Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 51/104 (49%), Positives = 72/104 (69%), Gaps = 3/104 (2%)
Query: 28 DNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQTKFKRIA 87
+ AY PYSK VGAAL+ ++ I+TGCN+ENASYG+ CAE+TAI KA+SEG+ F +
Sbjct: 15 EKAYIPYSKFPVGAALVTKEGKIYTGCNIENASYGLCNCAERTAIFKAVSEGERDFSYLV 74
Query: 88 VSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQV 131
++ +++ +SPCG+CRQVIAEF P + + VK D +V
Sbjct: 75 ITG---ETDGPISPCGACRQVIAEFCDPKMPVLLTNVKGDEKEV 115
>gi|307706398|ref|ZP_07643209.1| cytidine deaminase [Streptococcus mitis SK321]
gi|307618214|gb|EFN97370.1| cytidine deaminase [Streptococcus mitis SK321]
Length = 129
Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 54/115 (46%), Positives = 74/115 (64%), Gaps = 5/115 (4%)
Query: 19 LANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISE 78
L L+I+ AY PYS VGA L+ +D I+TG N+ENASY +T C E+TAI KA+SE
Sbjct: 6 LIELAIETSKKAYVPYSHFPVGAVLVAKDGNIYTGVNIENASYSLTNCGERTAIFKAVSE 65
Query: 79 GQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQVGL 133
GQ +F + V + K +SPCG+CRQV+AEF D++V +V D+S V +
Sbjct: 66 GQREFSELIVYG---QTEKPISPCGACRQVMAEFFEQ--DLKVTLVAKDKSTVEM 115
>gi|417937212|ref|ZP_12580516.1| cytidine deaminase [Streptococcus infantis X]
gi|417938138|ref|ZP_12581436.1| cytidine deaminase [Streptococcus infantis SK970]
gi|421277460|ref|ZP_15728279.1| cytidine deaminase [Streptococcus mitis SPAR10]
gi|343391228|gb|EGV03803.1| cytidine deaminase [Streptococcus infantis SK970]
gi|343398897|gb|EGV11423.1| cytidine deaminase [Streptococcus infantis X]
gi|395874712|gb|EJG85794.1| cytidine deaminase [Streptococcus mitis SPAR10]
Length = 129
Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 52/116 (44%), Positives = 74/116 (63%), Gaps = 5/116 (4%)
Query: 18 NLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAIS 77
L L+I+ AY PYS +GA L+ +D +I+TG N+ENASY +T C E+TAI KA+S
Sbjct: 5 ELIELAIETSKKAYVPYSHFPIGAVLVAKDGSIYTGVNIENASYPLTNCGERTAIFKAVS 64
Query: 78 EGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQVGL 133
EGQ F + V + K +SPCG+CRQV+ EF P D++V +V D++ V +
Sbjct: 65 EGQRDFSELIVYG---QTEKPISPCGACRQVMVEFFKP--DLKVTLVAKDKTTVEM 115
>gi|422759018|ref|ZP_16812780.1| cytidine deaminase [Streptococcus dysgalactiae subsp. dysgalactiae
ATCC 27957]
gi|322411853|gb|EFY02761.1| cytidine deaminase [Streptococcus dysgalactiae subsp. dysgalactiae
ATCC 27957]
Length = 129
Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 51/108 (47%), Positives = 75/108 (69%), Gaps = 3/108 (2%)
Query: 15 IEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISK 74
+ +L +L+I A +AY PYS +GAAL +D TI+TGCN+ENAS+G+T C E+TAI K
Sbjct: 2 VATDLVSLAIDASKHAYVPYSHFPIGAALKTKDGTIYTGCNIENASFGLTNCGERTAIFK 61
Query: 75 AISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVL 122
A+S+G K +A AI ++ + VSPCG+CRQV+ EF P+ + ++
Sbjct: 62 AVSDGH---KELAEIAIYGETQEPVSPCGACRQVMVEFFEPSSLVTLI 106
>gi|228993043|ref|ZP_04152966.1| Cytidine deaminase [Bacillus pseudomycoides DSM 12442]
gi|228766691|gb|EEM15331.1| Cytidine deaminase [Bacillus pseudomycoides DSM 12442]
Length = 132
Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 53/96 (55%), Positives = 68/96 (70%), Gaps = 3/96 (3%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
+ L +I+AR AY PYSK QVGAALL +D ++ GCNVENASYG+ CAE+TA+ KA+
Sbjct: 4 KELIQEAIEARKQAYVPYSKFQVGAALLTEDGKVYRGCNVENASYGLCNCAERTALFKAV 63
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEF 112
SEG +F IAV A D+ + V PCG+CRQV+ E
Sbjct: 64 SEGDKEFVAIAVVA---DTKRPVPPCGACRQVMIEL 96
>gi|217959410|ref|YP_002337958.1| cytidine deaminase [Bacillus cereus AH187]
gi|222095550|ref|YP_002529610.1| cytidine deaminase [Bacillus cereus Q1]
gi|229138631|ref|ZP_04267214.1| Cytidine deaminase [Bacillus cereus BDRD-ST26]
gi|229196142|ref|ZP_04322892.1| Cytidine deaminase [Bacillus cereus m1293]
gi|301053466|ref|YP_003791677.1| cytidine deaminase [Bacillus cereus biovar anthracis str. CI]
gi|375283912|ref|YP_005104350.1| cytidine deaminase [Bacillus cereus NC7401]
gi|423356197|ref|ZP_17333820.1| cytidine deaminase [Bacillus cereus IS075]
gi|423569156|ref|ZP_17545402.1| cytidine deaminase [Bacillus cereus MSX-A12]
gi|423576340|ref|ZP_17552459.1| cytidine deaminase [Bacillus cereus MSX-D12]
gi|423606337|ref|ZP_17582230.1| cytidine deaminase [Bacillus cereus VD102]
gi|217064968|gb|ACJ79218.1| cytidine deaminase [Bacillus cereus AH187]
gi|221239608|gb|ACM12318.1| cytidine deaminase [Bacillus cereus Q1]
gi|228587300|gb|EEK45368.1| Cytidine deaminase [Bacillus cereus m1293]
gi|228644831|gb|EEL01080.1| Cytidine deaminase [Bacillus cereus BDRD-ST26]
gi|300375635|gb|ADK04539.1| cytidine deaminase [Bacillus cereus biovar anthracis str. CI]
gi|358352438|dbj|BAL17610.1| cytidine deaminase [Bacillus cereus NC7401]
gi|401079905|gb|EJP88198.1| cytidine deaminase [Bacillus cereus IS075]
gi|401207336|gb|EJR14115.1| cytidine deaminase [Bacillus cereus MSX-D12]
gi|401207940|gb|EJR14718.1| cytidine deaminase [Bacillus cereus MSX-A12]
gi|401241893|gb|EJR48271.1| cytidine deaminase [Bacillus cereus VD102]
Length = 131
Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 51/104 (49%), Positives = 72/104 (69%), Gaps = 3/104 (2%)
Query: 28 DNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQTKFKRIA 87
+ AY PYSK VGAAL+ ++ I+TGCN+ENASYG+ CAE+TAI KA+SEG+ F +
Sbjct: 15 EKAYIPYSKFPVGAALVTKEGKIYTGCNIENASYGLCNCAERTAIFKAVSEGERDFSYLV 74
Query: 88 VSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQV 131
++ +++ +SPCG+CRQVIAEF P + + VK D +V
Sbjct: 75 ITG---ETDGPISPCGACRQVIAEFCDPKMPVLLTNVKGDEKEV 115
>gi|206971207|ref|ZP_03232158.1| cytidine deaminase [Bacillus cereus AH1134]
gi|228954585|ref|ZP_04116610.1| Cytidine deaminase [Bacillus thuringiensis serovar kurstaki str.
T03a001]
gi|229071804|ref|ZP_04205019.1| Cytidine deaminase [Bacillus cereus F65185]
gi|229081561|ref|ZP_04214059.1| Cytidine deaminase [Bacillus cereus Rock4-2]
gi|423411902|ref|ZP_17389022.1| cytidine deaminase [Bacillus cereus BAG3O-2]
gi|423426434|ref|ZP_17403465.1| cytidine deaminase [Bacillus cereus BAG3X2-2]
gi|423432312|ref|ZP_17409316.1| cytidine deaminase [Bacillus cereus BAG4O-1]
gi|423437747|ref|ZP_17414728.1| cytidine deaminase [Bacillus cereus BAG4X12-1]
gi|423503013|ref|ZP_17479605.1| cytidine deaminase [Bacillus cereus HD73]
gi|449091264|ref|YP_007423705.1| cytidine deaminase [Bacillus thuringiensis serovar kurstaki str.
HD73]
gi|206733979|gb|EDZ51150.1| cytidine deaminase [Bacillus cereus AH1134]
gi|228701766|gb|EEL54254.1| Cytidine deaminase [Bacillus cereus Rock4-2]
gi|228711399|gb|EEL63359.1| Cytidine deaminase [Bacillus cereus F65185]
gi|228805242|gb|EEM51836.1| Cytidine deaminase [Bacillus thuringiensis serovar kurstaki str.
T03a001]
gi|401103970|gb|EJQ11947.1| cytidine deaminase [Bacillus cereus BAG3O-2]
gi|401111181|gb|EJQ19080.1| cytidine deaminase [Bacillus cereus BAG3X2-2]
gi|401117068|gb|EJQ24906.1| cytidine deaminase [Bacillus cereus BAG4O-1]
gi|401120902|gb|EJQ28698.1| cytidine deaminase [Bacillus cereus BAG4X12-1]
gi|402459234|gb|EJV90971.1| cytidine deaminase [Bacillus cereus HD73]
gi|449025021|gb|AGE80184.1| cytidine deaminase [Bacillus thuringiensis serovar kurstaki str.
HD73]
Length = 132
Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 52/90 (57%), Positives = 66/90 (73%), Gaps = 3/90 (3%)
Query: 23 SIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQTK 82
+I+AR AY PYSK QVGAALL +D ++ GCNVENASYG+ CAE+TA+ KA+SEG +
Sbjct: 10 AIEARKQAYVPYSKFQVGAALLTRDGKVYRGCNVENASYGLCNCAERTALFKAVSEGDKE 69
Query: 83 FKRIAVSAILPDSNKFVSPCGSCRQVIAEF 112
F IAV A D+ + V PCG+CRQV+ E
Sbjct: 70 FVAIAVVA---DTKRPVPPCGACRQVMVEL 96
>gi|451818473|ref|YP_007454674.1| cytidine deaminase Cdd [Clostridium saccharoperbutylacetonicum
N1-4(HMT)]
gi|451784452|gb|AGF55420.1| cytidine deaminase Cdd [Clostridium saccharoperbutylacetonicum
N1-4(HMT)]
Length = 132
Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 53/115 (46%), Positives = 75/115 (65%), Gaps = 5/115 (4%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
+ L +++ R+ AY PYS +VGAA+L + I+ GCN+ENAS+G T CAE+T I K I
Sbjct: 4 KKLIKVALDYRNRAYSPYSDFKVGAAVLFESGEIYGGCNIENASFGATNCAERTGIFKGI 63
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQV 131
SEG++K K IA+ L + + PCG CRQVIAEF DI+V++ KS+ +
Sbjct: 64 SEGESKIKAIAIVGSLEE---YTYPCGICRQVIAEFGDE--DIKVILAKSENDYI 113
>gi|228910135|ref|ZP_04073955.1| Cytidine deaminase [Bacillus thuringiensis IBL 200]
gi|229180578|ref|ZP_04307920.1| Cytidine deaminase [Bacillus cereus 172560W]
gi|365158911|ref|ZP_09355099.1| cytidine deaminase [Bacillus sp. 7_6_55CFAA_CT2]
gi|228603002|gb|EEK60481.1| Cytidine deaminase [Bacillus cereus 172560W]
gi|228849652|gb|EEM94486.1| Cytidine deaminase [Bacillus thuringiensis IBL 200]
gi|363626075|gb|EHL77079.1| cytidine deaminase [Bacillus sp. 7_6_55CFAA_CT2]
Length = 132
Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 52/90 (57%), Positives = 66/90 (73%), Gaps = 3/90 (3%)
Query: 23 SIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQTK 82
+I+AR AY PYSK QVGAALL +D ++ GCNVENASYG+ CAE+TA+ KA+SEG +
Sbjct: 10 AIEARKQAYVPYSKFQVGAALLTRDGKVYRGCNVENASYGLCNCAERTALFKAVSEGDKE 69
Query: 83 FKRIAVSAILPDSNKFVSPCGSCRQVIAEF 112
F IAV A D+ + V PCG+CRQV+ E
Sbjct: 70 FVAIAVVA---DTKRPVPPCGACRQVMVEL 96
>gi|328957480|ref|YP_004374866.1| cytidine/deoxycytidine deaminase [Carnobacterium sp. 17-4]
gi|328673804|gb|AEB29850.1| cytidine/deoxycytidine deaminase [Carnobacterium sp. 17-4]
Length = 136
Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 51/99 (51%), Positives = 72/99 (72%), Gaps = 5/99 (5%)
Query: 28 DNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQTKFKRIA 87
D AY PYS VGAALL ++ +F+GCN+ENAS+G+T CAE+TAI KA+SEG+ +F +
Sbjct: 20 DKAYVPYSNFPVGAALLTKEGEVFSGCNIENASFGLTNCAERTAIFKAVSEGKKEFDYLV 79
Query: 88 VSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKS 126
V+ D++ +SPCG+CRQV+AEF P D+ VL+ +
Sbjct: 80 VTG---DTDGPISPCGACRQVLAEFCGP--DMPVLLTNN 113
>gi|414155684|ref|ZP_11411995.1| cytidine deaminase [Streptococcus sp. F0442]
gi|410872909|gb|EKS20848.1| cytidine deaminase [Streptococcus sp. F0442]
Length = 129
Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 54/120 (45%), Positives = 76/120 (63%), Gaps = 5/120 (4%)
Query: 18 NLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAIS 77
+L L+++ AY PYS VGA LL ++ I+TG N+ENAS+G+T C E+TAI KA+S
Sbjct: 5 DLIELAVEVSKQAYVPYSHFPVGAVLLTKNGDIYTGVNIENASFGLTNCGERTAIFKAVS 64
Query: 78 EGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQVGLITID 137
EG FK + V + K +SPCG+CRQV+AEF P D+ V +V ++S V + D
Sbjct: 65 EGARDFKELIVYG---QTEKPISPCGACRQVMAEFFEP--DLPVTLVSQNKSTVVMTVKD 119
>gi|227550702|ref|ZP_03980751.1| cytidine deaminase [Enterococcus faecium TX1330]
gi|257888039|ref|ZP_05667692.1| cytidine deaminase [Enterococcus faecium 1,141,733]
gi|257893156|ref|ZP_05672809.1| cytidine deaminase [Enterococcus faecium 1,231,408]
gi|257896342|ref|ZP_05675995.1| cytidine deaminase [Enterococcus faecium Com12]
gi|293379428|ref|ZP_06625572.1| cytidine deaminase [Enterococcus faecium PC4.1]
gi|424763858|ref|ZP_18191323.1| cytidine deaminase [Enterococcus faecium TX1337RF]
gi|431036396|ref|ZP_19492166.1| cytidine deaminase [Enterococcus faecium E1590]
gi|431753134|ref|ZP_19541811.1| cytidine deaminase [Enterococcus faecium E2620]
gi|431757960|ref|ZP_19546589.1| cytidine deaminase [Enterococcus faecium E3083]
gi|431763226|ref|ZP_19551779.1| cytidine deaminase [Enterococcus faecium E3548]
gi|227180163|gb|EEI61135.1| cytidine deaminase [Enterococcus faecium TX1330]
gi|257824093|gb|EEV51025.1| cytidine deaminase [Enterococcus faecium 1,141,733]
gi|257829535|gb|EEV56142.1| cytidine deaminase [Enterococcus faecium 1,231,408]
gi|257832907|gb|EEV59328.1| cytidine deaminase [Enterococcus faecium Com12]
gi|292641951|gb|EFF60117.1| cytidine deaminase [Enterococcus faecium PC4.1]
gi|402422034|gb|EJV54277.1| cytidine deaminase [Enterococcus faecium TX1337RF]
gi|430562936|gb|ELB02167.1| cytidine deaminase [Enterococcus faecium E1590]
gi|430612639|gb|ELB49674.1| cytidine deaminase [Enterococcus faecium E2620]
gi|430618465|gb|ELB55312.1| cytidine deaminase [Enterococcus faecium E3083]
gi|430622920|gb|ELB59630.1| cytidine deaminase [Enterococcus faecium E3548]
Length = 132
Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 52/110 (47%), Positives = 74/110 (67%), Gaps = 5/110 (4%)
Query: 15 IEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISK 74
++Q N++I+A D AY PYS VGA L+ + I+ G N+ENAS+G+T CAE+TA K
Sbjct: 4 LKQEWINIAIEALDKAYVPYSHFPVGACLVTESGKIYQGINIENASFGLTNCAERTAFFK 63
Query: 75 AISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIV 124
A+SEG+ F + V+ PD +SPCG+CRQV+AEF +P D+ V +V
Sbjct: 64 AVSEGERSFTHLVVAGHTPDP---ISPCGACRQVMAEFCAP--DMPVTLV 108
>gi|229127253|ref|ZP_04256250.1| Cytidine deaminase [Bacillus cereus BDRD-Cer4]
gi|423587637|ref|ZP_17563724.1| cytidine deaminase [Bacillus cereus VD045]
gi|423643036|ref|ZP_17618654.1| cytidine deaminase [Bacillus cereus VD166]
gi|228656369|gb|EEL12210.1| Cytidine deaminase [Bacillus cereus BDRD-Cer4]
gi|401227374|gb|EJR33903.1| cytidine deaminase [Bacillus cereus VD045]
gi|401275040|gb|EJR81007.1| cytidine deaminase [Bacillus cereus VD166]
Length = 131
Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 54/118 (45%), Positives = 76/118 (64%), Gaps = 10/118 (8%)
Query: 29 NAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQTKFKRIAV 88
AY PYSK VGAAL+ ++ ++TGCN+ENASYG+ CAE+TAI KA+SEG+ F + +
Sbjct: 16 KAYIPYSKFPVGAALVTKEGKVYTGCNIENASYGLCNCAERTAIFKAVSEGERDFSYLVI 75
Query: 89 SAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQV-------GLITIDGM 139
+ +++ +SPCG+CRQVIAEF P + + VK D +V G TID +
Sbjct: 76 TG---ETDGPISPCGACRQVIAEFCDPKMPVLLTNVKGDEKEVTVEQLLPGAFTIDDL 130
>gi|149183350|ref|ZP_01861788.1| cytidine deaminase [Bacillus sp. SG-1]
gi|148848947|gb|EDL63159.1| cytidine deaminase [Bacillus sp. SG-1]
Length = 132
Score = 107 bits (268), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 53/98 (54%), Positives = 70/98 (71%), Gaps = 5/98 (5%)
Query: 26 ARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQTKFKR 85
ARD AY PYSK VGAALL +D ++ GCN+ENA+Y M CAE+TA+ KA SEG KF +
Sbjct: 13 ARDRAYVPYSKFGVGAALLTEDGKVYHGCNIENAAYSMCNCAERTALFKAYSEGDKKFTK 72
Query: 86 IAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLI 123
+AV A D+ + V PCG+CRQVI+E P D++V++
Sbjct: 73 LAVVA---DTKRPVPPCGACRQVISELCPP--DMKVVL 105
>gi|392957208|ref|ZP_10322732.1| cytidine deaminase [Bacillus macauensis ZFHKF-1]
gi|391876615|gb|EIT85211.1| cytidine deaminase [Bacillus macauensis ZFHKF-1]
Length = 132
Score = 107 bits (268), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 53/112 (47%), Positives = 75/112 (66%), Gaps = 3/112 (2%)
Query: 16 EQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKA 75
++ L ++ AR AY PYSK VGAALL D ++ G N+ENA+Y MT CAE+TA+ KA
Sbjct: 3 KKQLIEEALTARTFAYVPYSKFPVGAALLSNDGKVYRGANIENAAYPMTNCAERTALYKA 62
Query: 76 ISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSD 127
+SEG T+F IAV+A D+++ V PCG+CRQV++E P + + +K D
Sbjct: 63 VSEGDTQFVAIAVTA---DTDRPVPPCGACRQVLSELCPPQMKVYLSNLKGD 111
>gi|75759783|ref|ZP_00739861.1| Cytidine deaminase [Bacillus thuringiensis serovar israelensis ATCC
35646]
gi|228900511|ref|ZP_04064735.1| Cytidine deaminase [Bacillus thuringiensis IBL 4222]
gi|434374863|ref|YP_006609507.1| cytidine deaminase [Bacillus thuringiensis HD-789]
gi|74492733|gb|EAO55871.1| Cytidine deaminase [Bacillus thuringiensis serovar israelensis ATCC
35646]
gi|228859116|gb|EEN03552.1| Cytidine deaminase [Bacillus thuringiensis IBL 4222]
gi|401873420|gb|AFQ25587.1| cytidine deaminase [Bacillus thuringiensis HD-789]
Length = 131
Score = 107 bits (268), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 51/103 (49%), Positives = 71/103 (68%), Gaps = 3/103 (2%)
Query: 29 NAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQTKFKRIAV 88
AY PYSK VGAAL+ ++ I+TGCN+ENASYG+ CAE+TAI KA+SEG+ F + +
Sbjct: 16 KAYIPYSKFPVGAALVTKEGKIYTGCNIENASYGLCNCAERTAIFKAVSEGERDFSYLVI 75
Query: 89 SAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQV 131
+ +++ +SPCG+CRQVIAEF P + + VK D +V
Sbjct: 76 TG---ETDAPISPCGACRQVIAEFCEPKMQVLLTNVKGDEKEV 115
>gi|65321673|ref|ZP_00394632.1| COG0295: Cytidine deaminase [Bacillus anthracis str. A2012]
Length = 132
Score = 107 bits (268), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 53/96 (55%), Positives = 67/96 (69%), Gaps = 3/96 (3%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
+ L +I+AR AY PYSK QVGAALL QD ++ GCNVENASYG+ CAE TA+ KA+
Sbjct: 4 KQLIQEAIEARKQAYVPYSKFQVGAALLTQDGKVYRGCNVENASYGLCNCAEXTALFKAV 63
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEF 112
SEG +F I AI+ D+ + V PCG+CRQV+ E
Sbjct: 64 SEGDKEFVAI---AIVADTKRPVPPCGACRQVMVEL 96
>gi|198422786|ref|XP_002128380.1| PREDICTED: similar to cytidine deaminase [Ciona intestinalis]
Length = 145
Score = 107 bits (268), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 57/111 (51%), Positives = 76/111 (68%), Gaps = 5/111 (4%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
+ L ++ +A+ AY PYSK +VGAAL+ ++ IFTGCNVEN + TICAE+TAI KAI
Sbjct: 7 KELLEMAREAKKFAYNPYSKFRVGAALVTKEGRIFTGCNVENVGFTSTICAERTAICKAI 66
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSD 127
SEG F IAV++ L D + V+PCG CRQ ++EF S +I+V KSD
Sbjct: 67 SEGYRDFVEIAVTSDLED--EIVTPCGVCRQTLSEFGS---NIKVYCSKSD 112
>gi|421489094|ref|ZP_15936482.1| cytidine deaminase [Streptococcus oralis SK304]
gi|400368311|gb|EJP21326.1| cytidine deaminase [Streptococcus oralis SK304]
Length = 129
Score = 107 bits (268), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 53/116 (45%), Positives = 75/116 (64%), Gaps = 5/116 (4%)
Query: 18 NLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAIS 77
L L+I+ AY PYS +GA L+ +D +I+TG N+ENASY +T C E+TAI KA+S
Sbjct: 5 ELIELAIETSKQAYVPYSHFPIGAVLVAKDGSIYTGVNIENASYPLTNCGERTAIFKAVS 64
Query: 78 EGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQVGL 133
EGQ +F + V + K +SPCG+CRQV+AEF D++V +V D+S V +
Sbjct: 65 EGQREFSELIVYG---QTEKPISPCGACRQVMAEFFEK--DLKVTLVAKDKSTVEM 115
>gi|118477358|ref|YP_894509.1| cytidine deaminase [Bacillus thuringiensis str. Al Hakam]
gi|196047006|ref|ZP_03114225.1| cytidine deaminase [Bacillus cereus 03BB108]
gi|225863859|ref|YP_002749237.1| cytidine deaminase [Bacillus cereus 03BB102]
gi|229184136|ref|ZP_04311345.1| Cytidine deaminase [Bacillus cereus BGSC 6E1]
gi|376265791|ref|YP_005118503.1| Cytidine deaminase [Bacillus cereus F837/76]
gi|118416583|gb|ABK85002.1| cytidine deaminase [Bacillus thuringiensis str. Al Hakam]
gi|196022110|gb|EDX60798.1| cytidine deaminase [Bacillus cereus 03BB108]
gi|225790393|gb|ACO30610.1| cytidine deaminase [Bacillus cereus 03BB102]
gi|228599251|gb|EEK56862.1| Cytidine deaminase [Bacillus cereus BGSC 6E1]
gi|364511591|gb|AEW54990.1| Cytidine deaminase [Bacillus cereus F837/76]
Length = 131
Score = 107 bits (268), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 51/102 (50%), Positives = 72/102 (70%), Gaps = 3/102 (2%)
Query: 30 AYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQTKFKRIAVS 89
AY PYSK VGAAL+ ++ I+TGCN+ENASYG+ CAE+TAI KA+SEG+ F + ++
Sbjct: 17 AYIPYSKFPVGAALVTKEGKIYTGCNIENASYGLCNCAERTAIFKAVSEGERDFSYLVIT 76
Query: 90 AILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQV 131
+++ +SPCG+CRQVIAEF +P + + VK D +V
Sbjct: 77 G---ETDGPISPCGACRQVIAEFCNPKMPVLLTNVKGDEKEV 115
>gi|420261571|ref|ZP_14764215.1| cytidine deaminase [Enterococcus sp. C1]
gi|394771505|gb|EJF51266.1| cytidine deaminase [Enterococcus sp. C1]
Length = 132
Score = 107 bits (268), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 53/124 (42%), Positives = 82/124 (66%), Gaps = 6/124 (4%)
Query: 16 EQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKA 75
++ + ++ A D AY PYSK VGA L+ ++ TI+ G N+ENASYG+T CAE+TA KA
Sbjct: 5 KKEWIDTAVSALDKAYVPYSKFPVGACLVAKNGTIYQGINIENASYGLTNCAERTAFFKA 64
Query: 76 ISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQVGLIT 135
+SEG+ +F+ + V+ P+ +SPCG+CRQV+ EF +P D+ V +V D + T
Sbjct: 65 VSEGEKEFQHLVVAGHTPEP---ISPCGACRQVMVEFCAP--DMPVTLV-GDDGVIKETT 118
Query: 136 IDGM 139
++G+
Sbjct: 119 VEGL 122
>gi|423454602|ref|ZP_17431455.1| cytidine deaminase [Bacillus cereus BAG5X1-1]
gi|423472191|ref|ZP_17448934.1| cytidine deaminase [Bacillus cereus BAG6O-2]
gi|423555342|ref|ZP_17531645.1| cytidine deaminase [Bacillus cereus MC67]
gi|401135571|gb|EJQ43168.1| cytidine deaminase [Bacillus cereus BAG5X1-1]
gi|401196746|gb|EJR03684.1| cytidine deaminase [Bacillus cereus MC67]
gi|402429046|gb|EJV61136.1| cytidine deaminase [Bacillus cereus BAG6O-2]
Length = 131
Score = 107 bits (268), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 51/103 (49%), Positives = 72/103 (69%), Gaps = 3/103 (2%)
Query: 29 NAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQTKFKRIAV 88
AY PYSK VGAAL+ ++ I+TGCN+ENASYG+ CAE+TAI KA+SEG+ F + +
Sbjct: 16 KAYIPYSKFPVGAALVTKEGKIYTGCNIENASYGLCNCAERTAIFKAVSEGERDFSYLVI 75
Query: 89 SAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQV 131
+ +++ +SPCG+CRQVIAEF +P + + VK D +V
Sbjct: 76 TG---ETDGPISPCGACRQVIAEFCNPKMPVLLTNVKGDEKEV 115
>gi|30019965|ref|NP_831596.1| cytidine deaminase [Bacillus cereus ATCC 14579]
gi|29895510|gb|AAP08797.1| Cytidine deaminase [Bacillus cereus ATCC 14579]
Length = 119
Score = 107 bits (268), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 54/118 (45%), Positives = 76/118 (64%), Gaps = 10/118 (8%)
Query: 29 NAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQTKFKRIAV 88
AY PYSK VGAAL+ ++ ++TGCN+ENASYG+ CAE+TAI KA+SEG+ F + +
Sbjct: 4 KAYIPYSKFPVGAALVTKEGKVYTGCNIENASYGLCNCAERTAIFKAVSEGERDFSYLVI 63
Query: 89 SAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQV-------GLITIDGM 139
+ +++ +SPCG+CRQVIAEF P + + VK D +V G TID +
Sbjct: 64 TG---ETDGPISPCGACRQVIAEFCDPKMPVLLTNVKGDEKEVTVEQLLPGAFTIDDL 118
>gi|329116860|ref|ZP_08245577.1| cytidine deaminase [Streptococcus parauberis NCFD 2020]
gi|326907265|gb|EGE54179.1| cytidine deaminase [Streptococcus parauberis NCFD 2020]
Length = 128
Score = 107 bits (268), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 55/113 (48%), Positives = 72/113 (63%), Gaps = 4/113 (3%)
Query: 18 NLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAIS 77
NL L+I A +AY PYS +GAALL ++ F+GCN+ENAS+G+T C E+TAI KA+S
Sbjct: 4 NLVQLAIDASKHAYVPYSHFPIGAALLTKEGHAFSGCNIENASFGLTNCGERTAIFKAVS 63
Query: 78 EGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQ 130
EG + I + D VSPCG+CRQV+AEF P+ LI K R+Q
Sbjct: 64 EGYQELSEIVIYGQTKDP---VSPCGACRQVMAEF-FPSTAKVTLIAKDGRTQ 112
>gi|257866507|ref|ZP_05646160.1| cytidine deaminase [Enterococcus casseliflavus EC30]
gi|257872977|ref|ZP_05652630.1| cytidine deaminase [Enterococcus casseliflavus EC10]
gi|257876111|ref|ZP_05655764.1| cytidine deaminase [Enterococcus casseliflavus EC20]
gi|257800465|gb|EEV29493.1| cytidine deaminase [Enterococcus casseliflavus EC30]
gi|257807141|gb|EEV35963.1| cytidine deaminase [Enterococcus casseliflavus EC10]
gi|257810277|gb|EEV39097.1| cytidine deaminase [Enterococcus casseliflavus EC20]
Length = 132
Score = 107 bits (268), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 53/124 (42%), Positives = 82/124 (66%), Gaps = 6/124 (4%)
Query: 16 EQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKA 75
++ + ++ A D AY PYSK VGA L+ ++ TI+ G N+ENASYG+T CAE+TA KA
Sbjct: 5 KKEWIDTAVSALDKAYVPYSKFPVGACLVAKNGTIYQGINIENASYGLTNCAERTAFFKA 64
Query: 76 ISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQVGLIT 135
+SEG+ +F+ + V+ P+ +SPCG+CRQV+ EF +P D+ V +V D + T
Sbjct: 65 VSEGEKEFQHLVVAGHTPEP---ISPCGACRQVMVEFCAP--DMPVTLV-GDDGVIKETT 118
Query: 136 IDGM 139
++G+
Sbjct: 119 VEGL 122
>gi|418086574|ref|ZP_12723745.1| cytidine deaminase [Streptococcus pneumoniae GA47033]
gi|418202112|ref|ZP_12838542.1| cytidine deaminase [Streptococcus pneumoniae GA52306]
gi|419455241|ref|ZP_13995201.1| cytidine deaminase [Streptococcus pneumoniae EU-NP04]
gi|419481863|ref|ZP_14021656.1| cytidine deaminase [Streptococcus pneumoniae GA40563]
gi|421285267|ref|ZP_15736044.1| cytidine deaminase [Streptococcus pneumoniae GA60190]
gi|421307023|ref|ZP_15757669.1| cytidine deaminase [Streptococcus pneumoniae GA60132]
gi|353759837|gb|EHD40420.1| cytidine deaminase [Streptococcus pneumoniae GA47033]
gi|353867915|gb|EHE47805.1| cytidine deaminase [Streptococcus pneumoniae GA52306]
gi|379580737|gb|EHZ45626.1| cytidine deaminase [Streptococcus pneumoniae GA40563]
gi|379629698|gb|EHZ94292.1| cytidine deaminase [Streptococcus pneumoniae EU-NP04]
gi|395887246|gb|EJG98261.1| cytidine deaminase [Streptococcus pneumoniae GA60190]
gi|395908986|gb|EJH19863.1| cytidine deaminase [Streptococcus pneumoniae GA60132]
Length = 129
Score = 107 bits (268), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 52/116 (44%), Positives = 76/116 (65%), Gaps = 5/116 (4%)
Query: 18 NLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAIS 77
L L+I+ +AY PYS +GA L+ +D +++TG N+ENASY +T C E+TA+ KAIS
Sbjct: 5 ELIELAIETSKHAYVPYSHFPIGAVLVAKDGSVYTGVNIENASYPLTNCGERTAVFKAIS 64
Query: 78 EGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQVGL 133
EGQ +F + V + K +SPCG+CRQV+AEF D++V +V D+S V +
Sbjct: 65 EGQREFSELIVYG---QTEKPISPCGACRQVMAEFFEQ--DLKVTLVAKDKSTVEM 115
>gi|42783427|ref|NP_980674.1| cytidine deaminase [Bacillus cereus ATCC 10987]
gi|402555564|ref|YP_006596835.1| cytidine deaminase [Bacillus cereus FRI-35]
gi|42739356|gb|AAS43282.1| cytidine deaminase [Bacillus cereus ATCC 10987]
gi|401796774|gb|AFQ10633.1| cytidine deaminase [Bacillus cereus FRI-35]
Length = 132
Score = 107 bits (268), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 52/96 (54%), Positives = 68/96 (70%), Gaps = 3/96 (3%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
+ L +I+AR AY PYSK QVGAALL +D ++ GCNVENASYG+ CAE+TA+ KA+
Sbjct: 4 KQLIQEAIEARKQAYVPYSKFQVGAALLTRDGKVYRGCNVENASYGLCNCAERTALFKAV 63
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEF 112
SEG +F IA+ A D+ + V PCG+CRQV+ E
Sbjct: 64 SEGDKEFVAIAIVA---DTKRPVPPCGACRQVMVEL 96
>gi|374340170|ref|YP_005096906.1| cytidine deaminase [Marinitoga piezophila KA3]
gi|372101704|gb|AEX85608.1| cytidine deaminase, homotetrameric [Marinitoga piezophila KA3]
Length = 141
Score = 107 bits (268), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 50/112 (44%), Positives = 81/112 (72%), Gaps = 8/112 (7%)
Query: 26 ARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQTKFKR 85
A N+Y PYS +VGAALL +D I+TG N+ENASYG+++CAE+TAI KA+SEG+ F+
Sbjct: 18 AMQNSYSPYSNFKVGAALLTKDGKIYTGTNIENASYGLSMCAERTAIFKAVSEGEKNFEA 77
Query: 86 IAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQVGLITID 137
+ V + ++++ +SPCG+CRQVIAEF ++ +I+ + + + ++T++
Sbjct: 78 LVV---IGETDEPISPCGACRQVIAEFG-----VENIILTNLKKDLKIMTVE 121
>gi|384046590|ref|YP_005494607.1| cytidine deaminase Cdd [Bacillus megaterium WSH-002]
gi|345444281|gb|AEN89298.1| Cytidine deaminase Cdd [Bacillus megaterium WSH-002]
Length = 135
Score = 107 bits (268), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 58/125 (46%), Positives = 79/125 (63%), Gaps = 15/125 (12%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
+ L + +I A A+ PYS VGAALL D I+ GCN+ENASYG+T CAE+TAI KA+
Sbjct: 7 KQLIDEAIAASKQAHVPYSHFHVGAALLTTDGKIYRGCNIENASYGLTNCAERTAIFKAV 66
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQVGLITI 136
SEG +F IAV + D++ +SPCG+CRQV+AEF CD D +Q+ L +
Sbjct: 67 SEGDKQFSAIAV---VGDTDGPISPCGACRQVLAEF----CD--------DHTQIILANL 111
Query: 137 DGMYL 141
G ++
Sbjct: 112 KGDFV 116
>gi|322376396|ref|ZP_08050889.1| cytidine deaminase [Streptococcus sp. M334]
gi|321282203|gb|EFX59210.1| cytidine deaminase [Streptococcus sp. M334]
Length = 129
Score = 107 bits (268), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 54/116 (46%), Positives = 75/116 (64%), Gaps = 5/116 (4%)
Query: 18 NLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAIS 77
L L+I+ AY PYS VGA L+ +D +I+TG N+ENASY +T C E+TAI KA+S
Sbjct: 5 ELIELAIETSKQAYVPYSHFPVGAVLVAKDGSIYTGVNIENASYPLTNCGERTAIFKAVS 64
Query: 78 EGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQVGL 133
EGQ +F + V + K +SPCG+CRQV+AEF D++V +V D+S V +
Sbjct: 65 EGQREFSELIVYG---RTEKPISPCGACRQVMAEFFEQ--DLKVTLVAKDKSTVEM 115
>gi|148990353|ref|ZP_01821539.1| cytidine deaminase [Streptococcus pneumoniae SP6-BS73]
gi|421210787|ref|ZP_15667775.1| cytidine deaminase [Streptococcus pneumoniae 2070035]
gi|421231601|ref|ZP_15688248.1| cytidine deaminase [Streptococcus pneumoniae 2080076]
gi|421268042|ref|ZP_15718914.1| cytidine deaminase [Streptococcus pneumoniae SPAR95]
gi|147924382|gb|EDK75473.1| cytidine deaminase [Streptococcus pneumoniae SP6-BS73]
gi|395574660|gb|EJG35237.1| cytidine deaminase [Streptococcus pneumoniae 2070035]
gi|395596700|gb|EJG56916.1| cytidine deaminase [Streptococcus pneumoniae 2080076]
gi|395871466|gb|EJG82572.1| cytidine deaminase [Streptococcus pneumoniae SPAR95]
Length = 129
Score = 107 bits (268), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 52/116 (44%), Positives = 76/116 (65%), Gaps = 5/116 (4%)
Query: 18 NLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAIS 77
L L+I+ +AY PYS +GA L+ +D +++TG N+ENASY +T C E+TA+ KAIS
Sbjct: 5 ELIELAIETSKHAYVPYSHFPIGAVLVAKDGSVYTGVNIENASYPLTNCGERTAVFKAIS 64
Query: 78 EGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQVGL 133
EGQ +F + V + K +SPCG+CRQV+AEF D++V +V D+S V +
Sbjct: 65 EGQREFSELIVYG---QTEKPISPCGACRQVMAEFFEQ--DLKVTLVAKDKSTVEM 115
>gi|357039524|ref|ZP_09101317.1| cytidine deaminase [Desulfotomaculum gibsoniae DSM 7213]
gi|355357887|gb|EHG05657.1| cytidine deaminase [Desulfotomaculum gibsoniae DSM 7213]
Length = 130
Score = 107 bits (268), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 48/96 (50%), Positives = 69/96 (71%), Gaps = 3/96 (3%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
+ L ++++AR NAY PYS VGAALL ++TGCNVEN+SYG+T+CAE+ A+ A+
Sbjct: 4 EQLITMALKARLNAYVPYSNFAVGAALLTTGGNVYTGCNVENSSYGLTVCAERIALFTAV 63
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEF 112
+ G+ KF +AV A + ++ SPCG+CRQV+AEF
Sbjct: 64 ASGERKFTALAVVA---GTEEYCSPCGACRQVLAEF 96
>gi|260438416|ref|ZP_05792232.1| cytidine deaminase [Butyrivibrio crossotus DSM 2876]
gi|292809002|gb|EFF68207.1| cytidine deaminase [Butyrivibrio crossotus DSM 2876]
Length = 132
Score = 107 bits (268), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 51/95 (53%), Positives = 67/95 (70%), Gaps = 3/95 (3%)
Query: 19 LANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISE 78
L N + +A +NAY PYS VGAALL D T++TGCNVEN+S+G TICAE+TA KA+SE
Sbjct: 6 LINYAKKAMNNAYAPYSNFCVGAALLTDDGTVYTGCNVENSSFGATICAERTAAVKAVSE 65
Query: 79 GQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFS 113
G +F +I AI+ + + PCG CRQ ++EFS
Sbjct: 66 GHRRFTKI---AIVSKAGGYTYPCGICRQFLSEFS 97
>gi|431592353|ref|ZP_19521589.1| cytidine deaminase [Enterococcus faecium E1861]
gi|430591978|gb|ELB30005.1| cytidine deaminase [Enterococcus faecium E1861]
Length = 132
Score = 107 bits (268), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 53/113 (46%), Positives = 73/113 (64%), Gaps = 5/113 (4%)
Query: 15 IEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISK 74
++Q N +I+A D AY PYS VGA L+ + I+ G N+ENAS+G+T CAE+TA K
Sbjct: 4 LKQEWINTAIEALDKAYVPYSHFPVGACLVTESGKIYQGINIENASFGLTNCAERTAFFK 63
Query: 75 AISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSD 127
A+SEG+ F + V+ PD +SPCG+CRQV+AEF P D+ V +V D
Sbjct: 64 AVSEGERSFTHLVVAGHTPDP---ISPCGACRQVMAEFCVP--DMPVTLVGDD 111
>gi|195472951|ref|XP_002088761.1| GE18746 [Drosophila yakuba]
gi|194174862|gb|EDW88473.1| GE18746 [Drosophila yakuba]
Length = 170
Score = 107 bits (268), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 56/124 (45%), Positives = 78/124 (62%), Gaps = 5/124 (4%)
Query: 4 HDIMEFSALDPIEQNLANLSIQARDNAYCPYSKLQVGAALLCQDD-TIFTGCNVENASYG 62
+++ F +LDP Q L + Q R AY PYS +VGAA +D IF+GCNVENA++
Sbjct: 15 EEVVTFGSLDPSVQELLTAAFQVRQRAYVPYSGFKVGAAFRAKDGGQIFSGCNVENAAFT 74
Query: 63 MTICAEKTAISKAISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVL 122
CAE+TA++KA+SEG T+F AV A PD F +PCG CRQ I EF++ DI +
Sbjct: 75 PCSCAERTAVTKAVSEGATEFSAGAVLAYEPDV--FTTPCGVCRQFIREFANE--DIPIY 130
Query: 123 IVKS 126
+ ++
Sbjct: 131 VAQA 134
>gi|339640278|ref|ZP_08661722.1| cytidine deaminase [Streptococcus sp. oral taxon 056 str. F0418]
gi|339453547|gb|EGP66162.1| cytidine deaminase [Streptococcus sp. oral taxon 056 str. F0418]
Length = 131
Score = 107 bits (268), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 54/114 (47%), Positives = 75/114 (65%), Gaps = 5/114 (4%)
Query: 18 NLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAIS 77
+L +L+++ AY PYS +GA L+ +D IFTG NVENAS+G+T C E+TAI KA+S
Sbjct: 7 DLIDLAVETSKYAYVPYSHFPIGAVLVAKDGRIFTGVNVENASFGLTNCGERTAIFKAVS 66
Query: 78 EGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQV 131
EG F+ + V + K VSPCG+CRQV+AEF D++V +V D+S V
Sbjct: 67 EGVQDFEELIVYG---QTEKPVSPCGACRQVMAEFFDK--DLKVTLVAKDKSTV 115
>gi|423481797|ref|ZP_17458487.1| cytidine deaminase [Bacillus cereus BAG6X1-2]
gi|401145005|gb|EJQ52532.1| cytidine deaminase [Bacillus cereus BAG6X1-2]
Length = 131
Score = 107 bits (268), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 51/103 (49%), Positives = 71/103 (68%), Gaps = 3/103 (2%)
Query: 29 NAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQTKFKRIAV 88
AY PYSK VGAAL+ ++ I+TGCN+ENASYG+ CAE+TAI KA+SEG+ F + +
Sbjct: 16 KAYIPYSKFPVGAALVTKEGKIYTGCNIENASYGLCNCAERTAIFKAVSEGERDFSYLVI 75
Query: 89 SAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQV 131
+ +++ +SPCG+CRQVIAEF P + + VK D +V
Sbjct: 76 TG---ETDGPISPCGACRQVIAEFCGPKMPVLLTNVKGDEKEV 115
>gi|229163246|ref|ZP_04291201.1| Cytidine deaminase [Bacillus cereus R309803]
gi|228620309|gb|EEK77180.1| Cytidine deaminase [Bacillus cereus R309803]
Length = 132
Score = 107 bits (268), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 52/96 (54%), Positives = 67/96 (69%), Gaps = 3/96 (3%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
+ L +I+AR AY PYSK QVGAALL D ++ GCNVENASYG+ CAE+TA+ KA+
Sbjct: 4 KQLIQEAIEARKQAYVPYSKFQVGAALLTHDGKVYRGCNVENASYGLCNCAERTALFKAV 63
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEF 112
SEG +F IA+ A D+ + V PCG+CRQV+ E
Sbjct: 64 SEGDKEFVAIAIVA---DTKRPVPPCGACRQVMVEL 96
>gi|294499534|ref|YP_003563234.1| cytidine deaminase [Bacillus megaterium QM B1551]
gi|294349471|gb|ADE69800.1| cytidine deaminase [Bacillus megaterium QM B1551]
Length = 132
Score = 107 bits (268), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 58/125 (46%), Positives = 79/125 (63%), Gaps = 15/125 (12%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
+ L + +I A A+ PYS VGAALL D I+ GCN+ENASYG+T CAE+TAI KA+
Sbjct: 4 KQLIDEAIAASKQAHVPYSHFHVGAALLTTDGKIYRGCNIENASYGLTNCAERTAIFKAV 63
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQVGLITI 136
SEG +F IAV + D++ +SPCG+CRQV+AEF CD D +Q+ L +
Sbjct: 64 SEGDKQFSAIAV---VGDTDGPISPCGACRQVLAEF----CD--------DHTQIILANL 108
Query: 137 DGMYL 141
G ++
Sbjct: 109 KGDFV 113
>gi|410920381|ref|XP_003973662.1| PREDICTED: cytidine deaminase-like [Takifugu rubripes]
Length = 158
Score = 107 bits (268), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 54/113 (47%), Positives = 78/113 (69%), Gaps = 5/113 (4%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
+ L S +A+ AYCPYSK +VG+ALL D+ + TGCNVENA + ICAE+ A++KA+
Sbjct: 27 KKLIEQSHEAKKQAYCPYSKFRVGSALLTADNRVITGCNVENACSNLGICAERNAVAKAV 86
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRS 129
SEG +FK IAV++ + + K++SPCG CRQV+ EF + + V + K+D S
Sbjct: 87 SEGCRQFKAIAVASDMTE--KYISPCGGCRQVLREFGT---NWIVFLSKADGS 134
>gi|423403512|ref|ZP_17380685.1| cytidine deaminase [Bacillus cereus BAG2X1-2]
gi|401648609|gb|EJS66204.1| cytidine deaminase [Bacillus cereus BAG2X1-2]
Length = 131
Score = 107 bits (268), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 51/103 (49%), Positives = 71/103 (68%), Gaps = 3/103 (2%)
Query: 29 NAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQTKFKRIAV 88
AY PYSK VGAAL+ ++ I+TGCN+ENASYG+ CAE+TAI KA+SEG+ F + +
Sbjct: 16 KAYIPYSKFPVGAALVTKEGKIYTGCNIENASYGLCNCAERTAIFKAVSEGERDFSYLVI 75
Query: 89 SAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQV 131
+ +++ +SPCG+CRQVIAEF P + + VK D +V
Sbjct: 76 TG---ETDGPISPCGACRQVIAEFCEPKMPVLLTNVKGDEKEV 115
>gi|229160893|ref|ZP_04288882.1| Cytidine deaminase [Bacillus cereus R309803]
gi|229172596|ref|ZP_04300155.1| Cytidine deaminase [Bacillus cereus MM3]
gi|384179876|ref|YP_005565638.1| cytidine deaminase [Bacillus thuringiensis serovar finitimus
YBT-020]
gi|423475841|ref|ZP_17452556.1| cytidine deaminase [Bacillus cereus BAG6X1-1]
gi|228611067|gb|EEK68330.1| Cytidine deaminase [Bacillus cereus MM3]
gi|228622461|gb|EEK79298.1| Cytidine deaminase [Bacillus cereus R309803]
gi|324325960|gb|ADY21220.1| cytidine deaminase [Bacillus thuringiensis serovar finitimus
YBT-020]
gi|402434673|gb|EJV66710.1| cytidine deaminase [Bacillus cereus BAG6X1-1]
Length = 131
Score = 107 bits (268), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 51/103 (49%), Positives = 71/103 (68%), Gaps = 3/103 (2%)
Query: 29 NAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQTKFKRIAV 88
AY PYSK VGAAL+ ++ I+TGCN+ENASYG+ CAE+TAI KA+SEG+ F + +
Sbjct: 16 KAYIPYSKFPVGAALVTKEGKIYTGCNIENASYGLCNCAERTAIFKAVSEGERDFSYLVI 75
Query: 89 SAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQV 131
+ +++ +SPCG+CRQVIAEF P + + VK D +V
Sbjct: 76 TG---ETDGPISPCGACRQVIAEFCEPKMPVLLTNVKGDEKEV 115
>gi|423395399|ref|ZP_17372600.1| cytidine deaminase [Bacillus cereus BAG2X1-1]
gi|423406274|ref|ZP_17383423.1| cytidine deaminase [Bacillus cereus BAG2X1-3]
gi|401654810|gb|EJS72349.1| cytidine deaminase [Bacillus cereus BAG2X1-1]
gi|401660268|gb|EJS77750.1| cytidine deaminase [Bacillus cereus BAG2X1-3]
Length = 132
Score = 107 bits (267), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 52/96 (54%), Positives = 67/96 (69%), Gaps = 3/96 (3%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
+ L +I+AR AY PYSK VGAALL QD ++ GCNVENASYG+ CAE+TA+ KA+
Sbjct: 4 KQLIQEAIEARKQAYVPYSKFHVGAALLTQDGRVYRGCNVENASYGLCNCAERTALFKAV 63
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEF 112
SEG +F IA+ A D+ + V PCG+CRQV+ E
Sbjct: 64 SEGDKEFVAIAIVA---DTKRPVPPCGACRQVMVEL 96
>gi|423552337|ref|ZP_17528664.1| cytidine deaminase [Bacillus cereus ISP3191]
gi|401186279|gb|EJQ93367.1| cytidine deaminase [Bacillus cereus ISP3191]
Length = 131
Score = 107 bits (267), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 51/103 (49%), Positives = 71/103 (68%), Gaps = 3/103 (2%)
Query: 29 NAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQTKFKRIAV 88
AY PYSK VGAAL+ ++ I+TGCN+ENASYG+ CAE+TAI KA+SEG+ F + +
Sbjct: 16 KAYIPYSKFPVGAALVTKEGKIYTGCNIENASYGLCNCAERTAIFKAVSEGERDFSYLVI 75
Query: 89 SAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQV 131
+ +++ +SPCG+CRQVIAEF P + + VK D +V
Sbjct: 76 TG---ETDGPISPCGACRQVIAEFCDPKMPVLLTNVKGDEKEV 115
>gi|345488989|ref|XP_003426031.1| PREDICTED: cytidine deaminase-like [Nasonia vitripennis]
Length = 153
Score = 107 bits (267), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 54/107 (50%), Positives = 70/107 (65%), Gaps = 1/107 (0%)
Query: 6 IMEFSALDPIEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTI 65
++ F LD Q L +QAR +Y PYSK VG+AL C D +I TGCNVENAS+ +I
Sbjct: 6 LVTFDKLDAAAQQLIREGLQARTFSYSPYSKFAVGSALRCADGSIRTGCNVENASFSASI 65
Query: 66 CAEKTAISKAISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEF 112
CAE+ A++KAISEGQ F I+V A D + +PCG CRQ++ EF
Sbjct: 66 CAERCALTKAISEGQQDFHSISVVANSID-GRLTTPCGVCRQMLCEF 111
>gi|423637365|ref|ZP_17613018.1| cytidine deaminase [Bacillus cereus VD156]
gi|401273308|gb|EJR79293.1| cytidine deaminase [Bacillus cereus VD156]
Length = 131
Score = 107 bits (267), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 51/103 (49%), Positives = 71/103 (68%), Gaps = 3/103 (2%)
Query: 29 NAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQTKFKRIAV 88
AY PYSK VGAAL+ ++ I+TGCN+ENASYG+ CAE+TAI KA+SEG+ F + +
Sbjct: 16 KAYIPYSKFPVGAALVTKEGKIYTGCNIENASYGLCNCAERTAIFKAVSEGERDFSYLVI 75
Query: 89 SAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQV 131
+ +++ +SPCG+CRQVIAEF P + + VK D +V
Sbjct: 76 TG---ETDGPISPCGACRQVIAEFCDPKMPVLLTNVKGDEKEV 115
>gi|433462941|ref|ZP_20420509.1| cytidine deaminase [Halobacillus sp. BAB-2008]
gi|432188078|gb|ELK45296.1| cytidine deaminase [Halobacillus sp. BAB-2008]
Length = 133
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 47/86 (54%), Positives = 69/86 (80%), Gaps = 3/86 (3%)
Query: 27 RDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQTKFKRI 86
R++AY PYSK VGAAL+ +D +++TGCN+ENA+Y ++ CAE+ AI KA+SEG ++F+ +
Sbjct: 14 REHAYVPYSKFPVGAALITEDGSVYTGCNIENAAYPVSCCAERVAIFKAVSEGHSRFQAL 73
Query: 87 AVSAILPDSNKFVSPCGSCRQVIAEF 112
AV+A D+ + V PCGSCRQV++EF
Sbjct: 74 AVAA---DTKRPVPPCGSCRQVMSEF 96
>gi|433447757|ref|ZP_20411163.1| cytidine deaminase [Anoxybacillus flavithermus TNO-09.006]
gi|431999738|gb|ELK20651.1| cytidine deaminase [Anoxybacillus flavithermus TNO-09.006]
Length = 131
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 54/112 (48%), Positives = 74/112 (66%), Gaps = 3/112 (2%)
Query: 16 EQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKA 75
+Q L + QAR+ AY PYSK +VGAALL +D ++ GCN+ENASYG+ CAE+TA+ KA
Sbjct: 3 KQLLIEAAKQARERAYVPYSKFKVGAALLTKDGKVYGGCNIENASYGLCNCAERTALFKA 62
Query: 76 ISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSD 127
SEG ++ +AV A D+ + V PCG+CRQVI E P + + +K D
Sbjct: 63 YSEGDLEYAMLAVVA---DTERPVPPCGACRQVIVELCDPNMPVILANMKGD 111
>gi|306829677|ref|ZP_07462867.1| cytidine deaminase [Streptococcus mitis ATCC 6249]
gi|304428763|gb|EFM31853.1| cytidine deaminase [Streptococcus mitis ATCC 6249]
Length = 129
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 52/115 (45%), Positives = 75/115 (65%), Gaps = 5/115 (4%)
Query: 19 LANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISE 78
L L+I+ NAY PYS +GA L+ +D +I+TG N+ENASY +T C E+TAI KA+SE
Sbjct: 6 LIELAIETSKNAYVPYSHFPIGAVLVAKDGSIYTGVNIENASYPLTNCGERTAIFKAVSE 65
Query: 79 GQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQVGL 133
GQ +F + V + K +SPCG+CRQV+ EF D++V +V D++ V +
Sbjct: 66 GQREFSELIVYG---QTEKPISPCGACRQVMVEFFEQ--DLKVTLVAKDKTTVEM 115
>gi|229017229|ref|ZP_04174136.1| Cytidine deaminase [Bacillus cereus AH1273]
gi|229023404|ref|ZP_04179907.1| Cytidine deaminase [Bacillus cereus AH1272]
gi|423391786|ref|ZP_17369012.1| cytidine deaminase [Bacillus cereus BAG1X1-3]
gi|228737902|gb|EEL88395.1| Cytidine deaminase [Bacillus cereus AH1272]
gi|228744057|gb|EEL94152.1| Cytidine deaminase [Bacillus cereus AH1273]
gi|401637619|gb|EJS55372.1| cytidine deaminase [Bacillus cereus BAG1X1-3]
Length = 131
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 51/103 (49%), Positives = 71/103 (68%), Gaps = 3/103 (2%)
Query: 29 NAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQTKFKRIAV 88
AY PYSK VGAAL+ ++ I+TGCN+ENASYG+ CAE+TAI KA+SEG+ F + +
Sbjct: 16 KAYIPYSKFPVGAALVTKEGKIYTGCNIENASYGLCNCAERTAIFKAVSEGERDFSYLVI 75
Query: 89 SAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQV 131
+ +++ +SPCG+CRQVIAEF P + + VK D +V
Sbjct: 76 TG---ETDGPISPCGACRQVIAEFCDPKMPVLLTNVKGDEKEV 115
>gi|291459916|ref|ZP_06599306.1| cytidine deaminase [Oribacterium sp. oral taxon 078 str. F0262]
gi|291417257|gb|EFE90976.1| cytidine deaminase [Oribacterium sp. oral taxon 078 str. F0262]
Length = 164
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 54/115 (46%), Positives = 75/115 (65%), Gaps = 9/115 (7%)
Query: 18 NLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAIS 77
L + +ARD +Y PYS QVGAALL +D I+ GCN+ENASYG + CAE++A+ +A+S
Sbjct: 31 RLIREAFRARDFSYSPYSGFQVGAALLSEDGRIYRGCNIENASYGASNCAERSALFQAVS 90
Query: 78 EGQTKFKRIAVSAILPDSNKFV--SPCGSCRQVIAEFSSPACDI---QVLIVKSD 127
EG F++IA+ S +F PCG CRQ +AEF CD+ QVL+ +S+
Sbjct: 91 EGVRSFRKIAIVGGASGSGEFSYCEPCGICRQALAEF----CDLESFQVLLARSE 141
>gi|423612512|ref|ZP_17588373.1| cytidine deaminase [Bacillus cereus VD107]
gi|401246101|gb|EJR52453.1| cytidine deaminase [Bacillus cereus VD107]
Length = 132
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 54/96 (56%), Positives = 67/96 (69%), Gaps = 3/96 (3%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
+ L + +AR AY PYSK QVGAALL +D I+ GCNVENASYG+ CAE+TA+ KAI
Sbjct: 4 KQLIQEATEARKQAYVPYSKFQVGAALLTKDGKIYRGCNVENASYGLCNCAERTALFKAI 63
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEF 112
SEG +F IAV A D+ + V PCG+CRQV+ E
Sbjct: 64 SEGDKEFVAIAVVA---DTKRPVPPCGACRQVMVEL 96
>gi|387929772|ref|ZP_10132449.1| cytidine deaminase [Bacillus methanolicus PB1]
gi|387586590|gb|EIJ78914.1| cytidine deaminase [Bacillus methanolicus PB1]
Length = 139
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 55/98 (56%), Positives = 70/98 (71%), Gaps = 4/98 (4%)
Query: 15 IEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISK 74
IEQ +A + +AR+ AY PYSK VGAALL D I+ GCN+ENA+Y MT CAE+TA+ K
Sbjct: 10 IEQLVAE-AKKAREKAYVPYSKFAVGAALLTDDGKIYHGCNIENAAYSMTNCAERTALFK 68
Query: 75 AISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEF 112
A+SEG FK +AV A D+ + V PCG+CRQVI+E
Sbjct: 69 ALSEGDRNFKALAVIA---DTKRPVPPCGACRQVISEL 103
>gi|206901305|ref|YP_002251037.1| cytidine deaminase [Dictyoglomus thermophilum H-6-12]
gi|206740408|gb|ACI19466.1| cytidine deaminase [Dictyoglomus thermophilum H-6-12]
Length = 131
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 54/111 (48%), Positives = 76/111 (68%), Gaps = 4/111 (3%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
+ L L+++A +N+Y PYS VGAALL +D ++ G N+ENASYG+TICAE+ AI KA+
Sbjct: 4 KKLYELAMKALENSYSPYSNFPVGAALLTKDGNVYLGTNIENASYGLTICAERLAIFKAV 63
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSD 127
SEG+ +F +I + + D N V PCG+CRQV+ EF SP +I + K D
Sbjct: 64 SEGKREFSKIVI--VGKDGNG-VPPCGACRQVMFEF-SPEMEILLYNKKED 110
>gi|365904107|ref|ZP_09441866.1| cytidine deaminase [Lactobacillus versmoldensis KCTC 3814]
Length = 133
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/115 (46%), Positives = 74/115 (64%), Gaps = 3/115 (2%)
Query: 16 EQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKA 75
EQ L + +NAY PYSK QV AA++ +D TI+TG N+ENASYG+T CAE+TAI KA
Sbjct: 5 EQQLFEQAKSVLENAYAPYSKYQVSAAIVTEDGTIYTGVNIENASYGLTNCAERTAIFKA 64
Query: 76 ISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQ 130
+SEG T + I I+ + + PCG+CRQV++EF P + + V +D +
Sbjct: 65 VSEGHTSVEAI---VIVNGTTEMSKPCGACRQVMSEFMGPDSQVFLANVNNDYHE 116
>gi|290580445|ref|YP_003484837.1| cytidine deaminase [Streptococcus mutans NN2025]
gi|254997344|dbj|BAH87945.1| putative cytidine deaminase [Streptococcus mutans NN2025]
Length = 156
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 54/114 (47%), Positives = 74/114 (64%), Gaps = 4/114 (3%)
Query: 18 NLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAIS 77
+L +I+A NAY PYS +GAAL + I+ GCN+ENAS+G+T C E+TAI KAIS
Sbjct: 32 DLIRTAIEASKNAYVPYSHFPIGAALKTKSGKIYQGCNIENASFGLTNCGERTAIFKAIS 91
Query: 78 EGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQV 131
EG + I AI ++ K +SPCG+CRQV+AEF P+ + LI K ++ V
Sbjct: 92 EGYRDLEEI---AIYGETQKPISPCGACRQVMAEFFEPSAKV-TLIAKGGKTVV 141
>gi|228952303|ref|ZP_04114392.1| Cytidine deaminase [Bacillus thuringiensis serovar kurstaki str.
T03a001]
gi|229069471|ref|ZP_04202760.1| Cytidine deaminase [Bacillus cereus F65185]
gi|229079101|ref|ZP_04211652.1| Cytidine deaminase [Bacillus cereus Rock4-2]
gi|229178330|ref|ZP_04305700.1| Cytidine deaminase [Bacillus cereus 172560W]
gi|365160260|ref|ZP_09356429.1| cytidine deaminase [Bacillus sp. 7_6_55CFAA_CT2]
gi|423414396|ref|ZP_17391516.1| cytidine deaminase [Bacillus cereus BAG3O-2]
gi|423423984|ref|ZP_17401015.1| cytidine deaminase [Bacillus cereus BAG3X2-2]
gi|423429820|ref|ZP_17406824.1| cytidine deaminase [Bacillus cereus BAG4O-1]
gi|423504486|ref|ZP_17481077.1| cytidine deaminase [Bacillus cereus HD73]
gi|449088722|ref|YP_007421163.1| Cytidine deaminase [Bacillus thuringiensis serovar kurstaki str.
HD73]
gi|228605209|gb|EEK62660.1| Cytidine deaminase [Bacillus cereus 172560W]
gi|228704275|gb|EEL56710.1| Cytidine deaminase [Bacillus cereus Rock4-2]
gi|228713610|gb|EEL65496.1| Cytidine deaminase [Bacillus cereus F65185]
gi|228807431|gb|EEM53961.1| Cytidine deaminase [Bacillus thuringiensis serovar kurstaki str.
T03a001]
gi|363623739|gb|EHL74844.1| cytidine deaminase [Bacillus sp. 7_6_55CFAA_CT2]
gi|401097989|gb|EJQ06008.1| cytidine deaminase [Bacillus cereus BAG3O-2]
gi|401114812|gb|EJQ22670.1| cytidine deaminase [Bacillus cereus BAG3X2-2]
gi|401122126|gb|EJQ29915.1| cytidine deaminase [Bacillus cereus BAG4O-1]
gi|402456355|gb|EJV88129.1| cytidine deaminase [Bacillus cereus HD73]
gi|449022479|gb|AGE77642.1| Cytidine deaminase [Bacillus thuringiensis serovar kurstaki str.
HD73]
Length = 131
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 51/103 (49%), Positives = 71/103 (68%), Gaps = 3/103 (2%)
Query: 29 NAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQTKFKRIAV 88
AY PYSK VGAAL+ ++ I+TGCN+ENASYG+ CAE+TAI KA+SEG+ F + +
Sbjct: 16 KAYIPYSKFPVGAALVTKEGKIYTGCNIENASYGLCNCAERTAIFKAVSEGERDFSYLVI 75
Query: 89 SAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQV 131
+ +++ +SPCG+CRQVIAEF P + + VK D +V
Sbjct: 76 TG---ETDGPISPCGACRQVIAEFCDPKMPVLLTNVKGDEKEV 115
>gi|195577504|ref|XP_002078610.1| GD23516 [Drosophila simulans]
gi|194190619|gb|EDX04195.1| GD23516 [Drosophila simulans]
Length = 170
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/124 (45%), Positives = 77/124 (62%), Gaps = 5/124 (4%)
Query: 4 HDIMEFSALDPIEQNLANLSIQARDNAYCPYSKLQVGAALLCQ-DDTIFTGCNVENASYG 62
+++ F +LDP Q L + Q R AY PYS +VGAA + D IF GCNVENA++
Sbjct: 15 EEVVTFGSLDPSIQELLTAAFQVRQRAYVPYSGFKVGAAFRAKVDGQIFAGCNVENAAFT 74
Query: 63 MTICAEKTAISKAISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVL 122
CAE+TAI+KA+SEG T+F AV A PD F +PCG CRQ I EF++ DI +
Sbjct: 75 PCSCAERTAIAKAVSEGATEFSAGAVLAYEPDV--FTTPCGVCRQFIREFAN--ADIPIY 130
Query: 123 IVKS 126
+ ++
Sbjct: 131 VAQA 134
>gi|334137046|ref|ZP_08510494.1| cytidine deaminase [Paenibacillus sp. HGF7]
gi|333605422|gb|EGL16788.1| cytidine deaminase [Paenibacillus sp. HGF7]
Length = 133
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 56/99 (56%), Positives = 71/99 (71%), Gaps = 2/99 (2%)
Query: 15 IEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISK 74
++ L +I+AR AY PYS QVGAA+L ++ GCNVENASYG+T CAE+TAI K
Sbjct: 1 MKDQLIQEAIEARKQAYVPYSGFQVGAAVLT-GGKVYRGCNVENASYGLTNCAERTAIFK 59
Query: 75 AISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFS 113
A+SEG+ K A+ AI+ D+ VSPCG+CRQVIAEFS
Sbjct: 60 AVSEGEGGHKLEAI-AIVADTEGPVSPCGACRQVIAEFS 97
>gi|299535810|ref|ZP_07049131.1| cytidine deaminase [Lysinibacillus fusiformis ZC1]
gi|298729010|gb|EFI69564.1| cytidine deaminase [Lysinibacillus fusiformis ZC1]
Length = 137
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 52/105 (49%), Positives = 72/105 (68%), Gaps = 3/105 (2%)
Query: 23 SIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQTK 82
S +AR+ AY PYSK +VGAALL +D + GCN+ENA Y MT CAE+TA KA+SEG +
Sbjct: 12 SKKAREKAYVPYSKFKVGAALLTKDGQVIHGCNIENAGYSMTNCAERTAFFKAVSEGIYE 71
Query: 83 FKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSD 127
F+ IA+ A D++ +PCG+CRQV+ EF +P + + +K D
Sbjct: 72 FEAIAIVA---DTDGPCAPCGACRQVMMEFCTPTMPVYLTNLKGD 113
>gi|47570605|ref|ZP_00241221.1| cytidine deaminase [Bacillus cereus G9241]
gi|423371907|ref|ZP_17349247.1| cytidine deaminase [Bacillus cereus AND1407]
gi|47552728|gb|EAL11163.1| cytidine deaminase [Bacillus cereus G9241]
gi|401100991|gb|EJQ08984.1| cytidine deaminase [Bacillus cereus AND1407]
Length = 131
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 51/103 (49%), Positives = 71/103 (68%), Gaps = 3/103 (2%)
Query: 29 NAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQTKFKRIAV 88
AY PYSK VGAAL+ ++ I+TGCN+ENASYG+ CAE+TAI KA+SEG+ F + +
Sbjct: 16 KAYIPYSKFPVGAALVTKEGKIYTGCNIENASYGLCNCAERTAIFKAVSEGERDFSYLVI 75
Query: 89 SAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQV 131
+ +++ +SPCG+CRQVIAEF P + + VK D +V
Sbjct: 76 TG---ETDGPISPCGACRQVIAEFCDPKMPVLLTNVKGDEKEV 115
>gi|78043042|ref|YP_360385.1| cytidine deaminase [Carboxydothermus hydrogenoformans Z-2901]
gi|77995157|gb|ABB14056.1| cytidine deaminase [Carboxydothermus hydrogenoformans Z-2901]
Length = 132
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/120 (47%), Positives = 74/120 (61%), Gaps = 5/120 (4%)
Query: 25 QARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQTKFK 84
+AR+NAY PYS +VGAA+L + I+ G N+ENASYG+TICAE+ AI+KAISEG+ K K
Sbjct: 14 EARENAYVPYSGFKVGAAVLGESGKIYQGANIENASYGLTICAERVAITKAISEGEKKLK 73
Query: 85 RIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQVGLITIDGMYLTLH 144
I V P +SPCG+CRQ +AEF I + + D + L I Y TL
Sbjct: 74 AILVVGDTPGP---ISPCGACRQFMAEFKIET--IYLANLAGDIKEFTLEQILPYYFTLE 128
>gi|397649775|ref|YP_006490302.1| cytidine deaminase [Streptococcus mutans GS-5]
gi|449876105|ref|ZP_21782608.1| cytidine deaminase [Streptococcus mutans S1B]
gi|449880640|ref|ZP_21783958.1| cytidine deaminase [Streptococcus mutans SA38]
gi|449886103|ref|ZP_21785983.1| cytidine deaminase [Streptococcus mutans SA41]
gi|449893300|ref|ZP_21788652.1| cytidine deaminase [Streptococcus mutans SF12]
gi|449897978|ref|ZP_21790337.1| cytidine deaminase [Streptococcus mutans R221]
gi|449902807|ref|ZP_21791738.1| cytidine deaminase [Streptococcus mutans M230]
gi|449915054|ref|ZP_21796031.1| cytidine deaminase [Streptococcus mutans 15JP3]
gi|449921610|ref|ZP_21799005.1| cytidine deaminase [Streptococcus mutans 1SM1]
gi|449924508|ref|ZP_21799699.1| cytidine deaminase [Streptococcus mutans 4SM1]
gi|449932048|ref|ZP_21802639.1| cytidine deaminase [Streptococcus mutans 3SN1]
gi|449959908|ref|ZP_21810427.1| cytidine deaminase [Streptococcus mutans 4VF1]
gi|449970681|ref|ZP_21813971.1| cytidine deaminase [Streptococcus mutans 2VS1]
gi|449974855|ref|ZP_21815523.1| cytidine deaminase [Streptococcus mutans 11VS1]
gi|449990332|ref|ZP_21821474.1| cytidine deaminase [Streptococcus mutans NVAB]
gi|449995608|ref|ZP_21823089.1| cytidine deaminase [Streptococcus mutans A9]
gi|450000214|ref|ZP_21825003.1| cytidine deaminase [Streptococcus mutans N29]
gi|450009798|ref|ZP_21828324.1| cytidine deaminase [Streptococcus mutans A19]
gi|450023154|ref|ZP_21830418.1| cytidine deaminase [Streptococcus mutans U138]
gi|450028481|ref|ZP_21832187.1| cytidine deaminase [Streptococcus mutans G123]
gi|450034709|ref|ZP_21834563.1| cytidine deaminase [Streptococcus mutans M21]
gi|450039853|ref|ZP_21836425.1| cytidine deaminase [Streptococcus mutans T4]
gi|450045073|ref|ZP_21838221.1| cytidine deaminase [Streptococcus mutans N34]
gi|450055510|ref|ZP_21841792.1| cytidine deaminase [Streptococcus mutans NLML4]
gi|450064032|ref|ZP_21845234.1| cytidine deaminase [Streptococcus mutans NLML5]
gi|450066998|ref|ZP_21846330.1| cytidine deaminase [Streptococcus mutans NLML9]
gi|450081989|ref|ZP_21852092.1| cytidine deaminase [Streptococcus mutans N66]
gi|450092240|ref|ZP_21855865.1| cytidine deaminase [Streptococcus mutans W6]
gi|450097650|ref|ZP_21857570.1| cytidine deaminase [Streptococcus mutans SF1]
gi|450105211|ref|ZP_21859723.1| cytidine deaminase [Streptococcus mutans SF14]
gi|450109635|ref|ZP_21861575.1| cytidine deaminase [Streptococcus mutans SM6]
gi|450116391|ref|ZP_21864470.1| cytidine deaminase [Streptococcus mutans ST1]
gi|450124817|ref|ZP_21867236.1| cytidine deaminase [Streptococcus mutans U2A]
gi|450136821|ref|ZP_21871246.1| cytidine deaminase [Streptococcus mutans NLML1]
gi|450144860|ref|ZP_21874286.1| cytidine deaminase [Streptococcus mutans 1ID3]
gi|450147492|ref|ZP_21875077.1| cytidine deaminase [Streptococcus mutans 14D]
gi|450159542|ref|ZP_21879512.1| cytidine deaminase [Streptococcus mutans 66-2A]
gi|450166160|ref|ZP_21882226.1| cytidine deaminase [Streptococcus mutans B]
gi|450169007|ref|ZP_21882739.1| cytidine deaminase [Streptococcus mutans SM4]
gi|450175472|ref|ZP_21885205.1| cytidine deaminase [Streptococcus mutans SM1]
gi|450180045|ref|ZP_21886972.1| cytidine deaminase [Streptococcus mutans 24]
gi|392603344|gb|AFM81508.1| cytidine deaminase [Streptococcus mutans GS-5]
gi|449150092|gb|EMB53869.1| cytidine deaminase [Streptococcus mutans 1ID3]
gi|449156850|gb|EMB60307.1| cytidine deaminase [Streptococcus mutans 1SM1]
gi|449157191|gb|EMB60640.1| cytidine deaminase [Streptococcus mutans 15JP3]
gi|449161915|gb|EMB65085.1| cytidine deaminase [Streptococcus mutans 3SN1]
gi|449162759|gb|EMB65882.1| cytidine deaminase [Streptococcus mutans 4SM1]
gi|449168267|gb|EMB71093.1| cytidine deaminase [Streptococcus mutans 4VF1]
gi|449173073|gb|EMB75666.1| cytidine deaminase [Streptococcus mutans 2VS1]
gi|449177909|gb|EMB80194.1| cytidine deaminase [Streptococcus mutans 11VS1]
gi|449181900|gb|EMB83959.1| cytidine deaminase [Streptococcus mutans NVAB]
gi|449184384|gb|EMB86334.1| cytidine deaminase [Streptococcus mutans A9]
gi|449186106|gb|EMB87953.1| cytidine deaminase [Streptococcus mutans N29]
gi|449190697|gb|EMB92251.1| cytidine deaminase [Streptococcus mutans A19]
gi|449193856|gb|EMB95226.1| cytidine deaminase [Streptococcus mutans U138]
gi|449195566|gb|EMB96880.1| cytidine deaminase [Streptococcus mutans G123]
gi|449196235|gb|EMB97520.1| cytidine deaminase [Streptococcus mutans M21]
gi|449199746|gb|EMC00799.1| cytidine deaminase [Streptococcus mutans T4]
gi|449200830|gb|EMC01848.1| cytidine deaminase [Streptococcus mutans N34]
gi|449204152|gb|EMC04970.1| cytidine deaminase [Streptococcus mutans NLML5]
gi|449207318|gb|EMC07995.1| cytidine deaminase [Streptococcus mutans NLML4]
gi|449208432|gb|EMC09027.1| cytidine deaminase [Streptococcus mutans NLML9]
gi|449214753|gb|EMC14992.1| cytidine deaminase [Streptococcus mutans N66]
gi|449218587|gb|EMC18592.1| cytidine deaminase [Streptococcus mutans W6]
gi|449222369|gb|EMC22097.1| cytidine deaminase [Streptococcus mutans SF1]
gi|449224812|gb|EMC24436.1| cytidine deaminase [Streptococcus mutans SF14]
gi|449225991|gb|EMC25556.1| cytidine deaminase [Streptococcus mutans SM6]
gi|449227052|gb|EMC26510.1| cytidine deaminase [Streptococcus mutans ST1]
gi|449233362|gb|EMC32438.1| cytidine deaminase [Streptococcus mutans U2A]
gi|449236186|gb|EMC35115.1| cytidine deaminase [Streptococcus mutans NLML1]
gi|449236895|gb|EMC35794.1| cytidine deaminase [Streptococcus mutans 14D]
gi|449239979|gb|EMC38678.1| cytidine deaminase [Streptococcus mutans B]
gi|449241200|gb|EMC39844.1| cytidine deaminase [Streptococcus mutans 66-2A]
gi|449246840|gb|EMC45136.1| cytidine deaminase [Streptococcus mutans SM1]
gi|449247825|gb|EMC46094.1| cytidine deaminase [Streptococcus mutans SM4]
gi|449248527|gb|EMC46764.1| cytidine deaminase [Streptococcus mutans 24]
gi|449252661|gb|EMC50633.1| cytidine deaminase [Streptococcus mutans SA38]
gi|449253181|gb|EMC51144.1| cytidine deaminase [Streptococcus mutans S1B]
gi|449254749|gb|EMC52647.1| cytidine deaminase [Streptococcus mutans SA41]
gi|449255946|gb|EMC53784.1| cytidine deaminase [Streptococcus mutans SF12]
gi|449260544|gb|EMC58043.1| cytidine deaminase [Streptococcus mutans R221]
gi|449262098|gb|EMC59555.1| cytidine deaminase [Streptococcus mutans M230]
Length = 128
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/114 (46%), Positives = 74/114 (64%), Gaps = 4/114 (3%)
Query: 18 NLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAIS 77
+L +I+A NAY PYS +GAAL + I+ GCN+ENAS+G+T C E+TAI KAIS
Sbjct: 4 DLIRTAIEASKNAYVPYSHFPIGAALKTKSGKIYQGCNIENASFGLTNCGERTAIFKAIS 63
Query: 78 EGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQV 131
EG + IA+ ++ K +SPCG+CRQV+AEF P+ + LI K ++ V
Sbjct: 64 EGYRDLEEIAIYG---ETQKPISPCGACRQVMAEFFEPSAKV-TLIAKGGKTVV 113
>gi|423452395|ref|ZP_17429248.1| cytidine deaminase [Bacillus cereus BAG5X1-1]
gi|401140033|gb|EJQ47590.1| cytidine deaminase [Bacillus cereus BAG5X1-1]
Length = 132
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 54/96 (56%), Positives = 66/96 (68%), Gaps = 3/96 (3%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
+ L + +AR AY PYSK QVGAALL QD I+ GCNVENASYG+ CAE+T + KAI
Sbjct: 4 KQLIQEATEARKRAYVPYSKFQVGAALLTQDGKIYRGCNVENASYGLCNCAERTVLFKAI 63
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEF 112
SEG +F IAV A D+ + V PCG+CRQV+ E
Sbjct: 64 SEGDNEFVAIAVVA---DTKRPVPPCGACRQVMVEL 96
>gi|317472767|ref|ZP_07932079.1| cytidine deaminase [Anaerostipes sp. 3_2_56FAA]
gi|316899759|gb|EFV21761.1| cytidine deaminase [Anaerostipes sp. 3_2_56FAA]
Length = 126
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 55/112 (49%), Positives = 77/112 (68%), Gaps = 6/112 (5%)
Query: 16 EQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKA 75
+++L L+ +AR+ AY PYS VGAALLC+D T+FTGCNVENASYG ICAE+ A+S A
Sbjct: 3 DKDLLALAKRAREFAYAPYSGFLVGAALLCKDGTVFTGCNVENASYGAAICAERNAVSTA 62
Query: 76 ISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSD 127
++ G +F+ IA++A + + V PCG C QV+ EFS D++V+ D
Sbjct: 63 VAAGYREFESIAIAA---EGDGCVYPCGICLQVLNEFSK---DLRVICQDGD 108
>gi|19746162|ref|NP_607298.1| cytidine deaminase [Streptococcus pyogenes MGAS8232]
gi|21910405|ref|NP_664673.1| cytidine deaminase [Streptococcus pyogenes MGAS315]
gi|28895981|ref|NP_802331.1| cytidine deaminase [Streptococcus pyogenes SSI-1]
gi|50914278|ref|YP_060250.1| cytidine deaminase [Streptococcus pyogenes MGAS10394]
gi|56807530|ref|ZP_00365458.1| COG0295: Cytidine deaminase [Streptococcus pyogenes M49 591]
gi|71903580|ref|YP_280383.1| cytidine deaminase [Streptococcus pyogenes MGAS6180]
gi|94988676|ref|YP_596777.1| cytidine deaminase [Streptococcus pyogenes MGAS9429]
gi|94992499|ref|YP_600598.1| cytidine deaminase [Streptococcus pyogenes MGAS2096]
gi|94994488|ref|YP_602586.1| cytidine deaminase [Streptococcus pyogenes MGAS10750]
gi|139473698|ref|YP_001128414.1| cytidine deaminase [Streptococcus pyogenes str. Manfredo]
gi|209559498|ref|YP_002285970.1| cytidine deaminase [Streptococcus pyogenes NZ131]
gi|306827291|ref|ZP_07460578.1| cytidine deaminase [Streptococcus pyogenes ATCC 10782]
gi|386362755|ref|YP_006072086.1| cytidine deaminase [Streptococcus pyogenes Alab49]
gi|417856816|ref|ZP_12501875.1| cytidine deaminase [Streptococcus pyogenes HKU QMH11M0907901]
gi|421892315|ref|ZP_16322998.1| Cytidine deaminase [Streptococcus pyogenes NS88.2]
gi|19748341|gb|AAL97797.1| putative cytidine deaminase [Streptococcus pyogenes MGAS8232]
gi|21904603|gb|AAM79476.1| putative cytidine deaminase [Streptococcus pyogenes MGAS315]
gi|28811231|dbj|BAC64164.1| putative cytidine deaminase [Streptococcus pyogenes SSI-1]
gi|50903352|gb|AAT87067.1| Cytidine deaminase [Streptococcus pyogenes MGAS10394]
gi|71802675|gb|AAX72028.1| cytidine deaminase [Streptococcus pyogenes MGAS6180]
gi|94542184|gb|ABF32233.1| cytidine deaminase [Streptococcus pyogenes MGAS9429]
gi|94546007|gb|ABF36054.1| Cytidine deaminase [Streptococcus pyogenes MGAS2096]
gi|94547996|gb|ABF38042.1| Cytidine deaminase [Streptococcus pyogenes MGAS10750]
gi|134271945|emb|CAM30183.1| cytidine deaminase [Streptococcus pyogenes str. Manfredo]
gi|209540699|gb|ACI61275.1| Cytidine deaminase [Streptococcus pyogenes NZ131]
gi|304430438|gb|EFM33460.1| cytidine deaminase [Streptococcus pyogenes ATCC 10782]
gi|350277164|gb|AEQ24532.1| cytidine deaminase [Streptococcus pyogenes Alab49]
gi|379981938|emb|CCG26720.1| Cytidine deaminase [Streptococcus pyogenes NS88.2]
gi|387933771|gb|EIK41884.1| cytidine deaminase [Streptococcus pyogenes HKU QMH11M0907901]
Length = 129
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 54/112 (48%), Positives = 78/112 (69%), Gaps = 4/112 (3%)
Query: 18 NLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAIS 77
+L + ++QA + AY PYS VGAAL +D TI+TGCN+EN S+G+T C E+TAI KAIS
Sbjct: 5 DLVSCAVQASEYAYVPYSHFPVGAALKTKDGTIYTGCNIENVSFGLTNCGERTAIFKAIS 64
Query: 78 EGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRS 129
+G + I AI ++ + VSPCG+CRQV+AEF +P+ + LI K+ ++
Sbjct: 65 DGHKELVEI---AIYGETMQPVSPCGACRQVMAEFFAPS-SLVTLIAKNGQT 112
>gi|30261929|ref|NP_844306.1| cytidine deaminase [Bacillus anthracis str. Ames]
gi|47527190|ref|YP_018539.1| cytidine deaminase [Bacillus anthracis str. 'Ames Ancestor']
gi|49184769|ref|YP_028021.1| cytidine deaminase [Bacillus anthracis str. Sterne]
gi|49481150|ref|YP_036067.1| cytidine deaminase [Bacillus thuringiensis serovar konkukian str.
97-27]
gi|52143527|ref|YP_083301.1| cytidine deaminase [Bacillus cereus E33L]
gi|165869405|ref|ZP_02214064.1| cytidine deaminase [Bacillus anthracis str. A0488]
gi|167633474|ref|ZP_02391799.1| cytidine deaminase [Bacillus anthracis str. A0442]
gi|167638711|ref|ZP_02396986.1| cytidine deaminase [Bacillus anthracis str. A0193]
gi|177650495|ref|ZP_02933462.1| cytidine deaminase [Bacillus anthracis str. A0174]
gi|190566429|ref|ZP_03019347.1| cytidine deaminase [Bacillus anthracis str. Tsiankovskii-I]
gi|196033344|ref|ZP_03100756.1| cytidine deaminase [Bacillus cereus W]
gi|218903047|ref|YP_002450881.1| cytidine deaminase [Bacillus cereus AH820]
gi|227815286|ref|YP_002815295.1| cytidine deaminase [Bacillus anthracis str. CDC 684]
gi|228914521|ref|ZP_04078130.1| Cytidine deaminase [Bacillus thuringiensis serovar pulsiensis BGSC
4CC1]
gi|228926991|ref|ZP_04090057.1| Cytidine deaminase [Bacillus thuringiensis serovar pondicheriensis
BGSC 4BA1]
gi|228933232|ref|ZP_04096088.1| Cytidine deaminase [Bacillus thuringiensis serovar andalousiensis
BGSC 4AW1]
gi|228945541|ref|ZP_04107891.1| Cytidine deaminase [Bacillus thuringiensis serovar monterrey BGSC
4AJ1]
gi|229090909|ref|ZP_04222135.1| Cytidine deaminase [Bacillus cereus Rock3-42]
gi|229121477|ref|ZP_04250704.1| Cytidine deaminase [Bacillus cereus 95/8201]
gi|229603514|ref|YP_002866302.1| cytidine deaminase [Bacillus anthracis str. A0248]
gi|254684491|ref|ZP_05148351.1| cytidine deaminase [Bacillus anthracis str. CNEVA-9066]
gi|254721195|ref|ZP_05182985.1| cytidine deaminase [Bacillus anthracis str. A1055]
gi|254734795|ref|ZP_05192507.1| cytidine deaminase [Bacillus anthracis str. Western North America
USA6153]
gi|254741196|ref|ZP_05198884.1| cytidine deaminase [Bacillus anthracis str. Kruger B]
gi|254755448|ref|ZP_05207482.1| cytidine deaminase [Bacillus anthracis str. Vollum]
gi|254759985|ref|ZP_05212009.1| cytidine deaminase [Bacillus anthracis str. Australia 94]
gi|386735665|ref|YP_006208846.1| Cytidine deaminase [Bacillus anthracis str. H9401]
gi|421508822|ref|ZP_15955733.1| cytidine deaminase [Bacillus anthracis str. UR-1]
gi|421635723|ref|ZP_16076322.1| cytidine deaminase [Bacillus anthracis str. BF1]
gi|30256555|gb|AAP25792.1| cytidine deaminase [Bacillus anthracis str. Ames]
gi|47502338|gb|AAT31014.1| cytidine deaminase [Bacillus anthracis str. 'Ames Ancestor']
gi|49178696|gb|AAT54072.1| cytidine deaminase [Bacillus anthracis str. Sterne]
gi|49332706|gb|AAT63352.1| cytidine deaminase [Bacillus thuringiensis serovar konkukian str.
97-27]
gi|51976996|gb|AAU18546.1| cytidine deaminase [Bacillus cereus E33L]
gi|164714845|gb|EDR20363.1| cytidine deaminase [Bacillus anthracis str. A0488]
gi|167513175|gb|EDR88546.1| cytidine deaminase [Bacillus anthracis str. A0193]
gi|167531512|gb|EDR94190.1| cytidine deaminase [Bacillus anthracis str. A0442]
gi|172083639|gb|EDT68699.1| cytidine deaminase [Bacillus anthracis str. A0174]
gi|190562564|gb|EDV16531.1| cytidine deaminase [Bacillus anthracis str. Tsiankovskii-I]
gi|195993778|gb|EDX57734.1| cytidine deaminase [Bacillus cereus W]
gi|218537160|gb|ACK89558.1| cytidine deaminase [Bacillus cereus AH820]
gi|227006681|gb|ACP16424.1| cytidine deaminase [Bacillus anthracis str. CDC 684]
gi|228661941|gb|EEL17554.1| Cytidine deaminase [Bacillus cereus 95/8201]
gi|228692429|gb|EEL46162.1| Cytidine deaminase [Bacillus cereus Rock3-42]
gi|228814059|gb|EEM60330.1| Cytidine deaminase [Bacillus thuringiensis serovar monterrey BGSC
4AJ1]
gi|228826393|gb|EEM72170.1| Cytidine deaminase [Bacillus thuringiensis serovar andalousiensis
BGSC 4AW1]
gi|228832726|gb|EEM78297.1| Cytidine deaminase [Bacillus thuringiensis serovar pondicheriensis
BGSC 4BA1]
gi|228844840|gb|EEM89882.1| Cytidine deaminase [Bacillus thuringiensis serovar pulsiensis BGSC
4CC1]
gi|229267922|gb|ACQ49559.1| cytidine deaminase [Bacillus anthracis str. A0248]
gi|384385517|gb|AFH83178.1| Cytidine deaminase [Bacillus anthracis str. H9401]
gi|401821218|gb|EJT20377.1| cytidine deaminase [Bacillus anthracis str. UR-1]
gi|403396251|gb|EJY93488.1| cytidine deaminase [Bacillus anthracis str. BF1]
Length = 131
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 51/103 (49%), Positives = 71/103 (68%), Gaps = 3/103 (2%)
Query: 29 NAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQTKFKRIAV 88
AY PYSK VGAAL+ ++ I+TGCN+ENASYG+ CAE+TAI KA+SEG+ F + +
Sbjct: 16 KAYIPYSKFPVGAALVTKEGKIYTGCNIENASYGLCNCAERTAIFKAVSEGERDFSYLVI 75
Query: 89 SAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQV 131
+ +++ +SPCG+CRQVIAEF P + + VK D +V
Sbjct: 76 TG---ETDGPISPCGACRQVIAEFCDPKMPVLLTNVKGDEKEV 115
>gi|163939734|ref|YP_001644618.1| cytidine deaminase [Bacillus weihenstephanensis KBAB4]
gi|206970517|ref|ZP_03231469.1| cytidine deaminase [Bacillus cereus AH1134]
gi|229011223|ref|ZP_04168416.1| Cytidine deaminase [Bacillus mycoides DSM 2048]
gi|229059585|ref|ZP_04196964.1| Cytidine deaminase [Bacillus cereus AH603]
gi|229136331|ref|ZP_04265075.1| Cytidine deaminase [Bacillus cereus BDRD-ST196]
gi|229144539|ref|ZP_04272942.1| Cytidine deaminase [Bacillus cereus BDRD-ST24]
gi|229190023|ref|ZP_04317031.1| Cytidine deaminase [Bacillus cereus ATCC 10876]
gi|296502519|ref|YP_003664219.1| cytidine deaminase [Bacillus thuringiensis BMB171]
gi|423366327|ref|ZP_17343760.1| cytidine deaminase [Bacillus cereus VD142]
gi|423420111|ref|ZP_17397200.1| cytidine deaminase [Bacillus cereus BAG3X2-1]
gi|423487044|ref|ZP_17463726.1| cytidine deaminase [Bacillus cereus BtB2-4]
gi|423492768|ref|ZP_17469412.1| cytidine deaminase [Bacillus cereus CER057]
gi|423500440|ref|ZP_17477057.1| cytidine deaminase [Bacillus cereus CER074]
gi|423509778|ref|ZP_17486309.1| cytidine deaminase [Bacillus cereus HuA2-1]
gi|423516598|ref|ZP_17493079.1| cytidine deaminase [Bacillus cereus HuA2-4]
gi|423600729|ref|ZP_17576729.1| cytidine deaminase [Bacillus cereus VD078]
gi|423610283|ref|ZP_17586144.1| cytidine deaminase [Bacillus cereus VD107]
gi|423663223|ref|ZP_17638392.1| cytidine deaminase [Bacillus cereus VDM022]
gi|423667583|ref|ZP_17642612.1| cytidine deaminase [Bacillus cereus VDM034]
gi|423676351|ref|ZP_17651290.1| cytidine deaminase [Bacillus cereus VDM062]
gi|163861931|gb|ABY42990.1| cytidine deaminase [Bacillus weihenstephanensis KBAB4]
gi|206734153|gb|EDZ51323.1| cytidine deaminase [Bacillus cereus AH1134]
gi|228593515|gb|EEK51326.1| Cytidine deaminase [Bacillus cereus ATCC 10876]
gi|228638952|gb|EEK95379.1| Cytidine deaminase [Bacillus cereus BDRD-ST24]
gi|228647129|gb|EEL03220.1| Cytidine deaminase [Bacillus cereus BDRD-ST196]
gi|228719719|gb|EEL71316.1| Cytidine deaminase [Bacillus cereus AH603]
gi|228750106|gb|EEL99938.1| Cytidine deaminase [Bacillus mycoides DSM 2048]
gi|296323571|gb|ADH06499.1| cytidine deaminase [Bacillus thuringiensis BMB171]
gi|401087960|gb|EJP96156.1| cytidine deaminase [Bacillus cereus VD142]
gi|401102020|gb|EJQ10007.1| cytidine deaminase [Bacillus cereus BAG3X2-1]
gi|401154726|gb|EJQ62140.1| cytidine deaminase [Bacillus cereus CER074]
gi|401156252|gb|EJQ63659.1| cytidine deaminase [Bacillus cereus CER057]
gi|401165504|gb|EJQ72823.1| cytidine deaminase [Bacillus cereus HuA2-4]
gi|401231275|gb|EJR37778.1| cytidine deaminase [Bacillus cereus VD078]
gi|401249600|gb|EJR55906.1| cytidine deaminase [Bacillus cereus VD107]
gi|401296422|gb|EJS02041.1| cytidine deaminase [Bacillus cereus VDM022]
gi|401303248|gb|EJS08810.1| cytidine deaminase [Bacillus cereus VDM034]
gi|401307472|gb|EJS12897.1| cytidine deaminase [Bacillus cereus VDM062]
gi|402438921|gb|EJV70930.1| cytidine deaminase [Bacillus cereus BtB2-4]
gi|402456010|gb|EJV87788.1| cytidine deaminase [Bacillus cereus HuA2-1]
Length = 131
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 51/103 (49%), Positives = 71/103 (68%), Gaps = 3/103 (2%)
Query: 29 NAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQTKFKRIAV 88
AY PYSK VGAAL+ ++ I+TGCN+ENASYG+ CAE+TAI KA+SEG+ F + +
Sbjct: 16 KAYIPYSKFPVGAALVTKEGKIYTGCNIENASYGLCNCAERTAIFKAVSEGERDFSYLVI 75
Query: 89 SAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQV 131
+ +++ +SPCG+CRQVIAEF P + + VK D +V
Sbjct: 76 TG---ETDGPISPCGACRQVIAEFCDPKMPVLLTNVKGDEKEV 115
>gi|449941432|ref|ZP_21805559.1| cytidine deaminase [Streptococcus mutans 11A1]
gi|449152044|gb|EMB55761.1| cytidine deaminase [Streptococcus mutans 11A1]
Length = 128
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/114 (46%), Positives = 74/114 (64%), Gaps = 4/114 (3%)
Query: 18 NLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAIS 77
+L +I+A NAY PYS +GAAL + I+ GCN+ENAS+G+T C E+TAI KAIS
Sbjct: 4 DLIRTAIEASKNAYVPYSHFPIGAALKTKSGKIYQGCNIENASFGLTNCGERTAIFKAIS 63
Query: 78 EGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQV 131
EG + IA+ ++ K +SPCG+CRQV+AEF P+ + LI K ++ V
Sbjct: 64 EGYRDLEEIAIYG---ETQKPISPCGACRQVMAEFFEPSAKV-TLIAKGGKTVV 113
>gi|229166792|ref|ZP_04294542.1| Cytidine deaminase [Bacillus cereus AH621]
gi|423594129|ref|ZP_17570160.1| cytidine deaminase [Bacillus cereus VD048]
gi|228616789|gb|EEK73864.1| Cytidine deaminase [Bacillus cereus AH621]
gi|401224930|gb|EJR31482.1| cytidine deaminase [Bacillus cereus VD048]
Length = 131
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 51/103 (49%), Positives = 71/103 (68%), Gaps = 3/103 (2%)
Query: 29 NAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQTKFKRIAV 88
AY PYSK VGAAL+ ++ I+TGCN+ENASYG+ CAE+TAI KA+SEG+ F + +
Sbjct: 16 KAYIPYSKFPVGAALVTKEGKIYTGCNIENASYGLCNCAERTAIFKAVSEGERDFSYLVI 75
Query: 89 SAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQV 131
+ +++ +SPCG+CRQVIAEF P + + VK D +V
Sbjct: 76 TG---ETDGPISPCGACRQVIAEFCDPKMPVLLTNVKGDEKEV 115
>gi|221231628|ref|YP_002510780.1| cytidine deaminase [Streptococcus pneumoniae ATCC 700669]
gi|415697851|ref|ZP_11456966.1| cytidine deaminase [Streptococcus pneumoniae 459-5]
gi|415749248|ref|ZP_11477192.1| cytidine deaminase [Streptococcus pneumoniae SV35]
gi|415751930|ref|ZP_11479041.1| cytidine deaminase [Streptococcus pneumoniae SV36]
gi|418123108|ref|ZP_12760043.1| cytidine deaminase [Streptococcus pneumoniae GA44378]
gi|418127695|ref|ZP_12764591.1| cytidine deaminase [Streptococcus pneumoniae NP170]
gi|418136869|ref|ZP_12773712.1| cytidine deaminase [Streptococcus pneumoniae GA11663]
gi|418177868|ref|ZP_12814452.1| cytidine deaminase [Streptococcus pneumoniae GA41565]
gi|419472898|ref|ZP_14012749.1| cytidine deaminase [Streptococcus pneumoniae GA13430]
gi|220674088|emb|CAR68605.1| cytidine deaminase [Streptococcus pneumoniae ATCC 700669]
gi|353798581|gb|EHD78911.1| cytidine deaminase [Streptococcus pneumoniae GA44378]
gi|353800156|gb|EHD80470.1| cytidine deaminase [Streptococcus pneumoniae NP170]
gi|353844642|gb|EHE24685.1| cytidine deaminase [Streptococcus pneumoniae GA41565]
gi|353902797|gb|EHE78325.1| cytidine deaminase [Streptococcus pneumoniae GA11663]
gi|379552405|gb|EHZ17494.1| cytidine deaminase [Streptococcus pneumoniae GA13430]
gi|381309626|gb|EIC50459.1| cytidine deaminase [Streptococcus pneumoniae SV36]
gi|381317542|gb|EIC58267.1| cytidine deaminase [Streptococcus pneumoniae SV35]
gi|381318548|gb|EIC59269.1| cytidine deaminase [Streptococcus pneumoniae 459-5]
Length = 129
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 52/117 (44%), Positives = 76/117 (64%), Gaps = 5/117 (4%)
Query: 18 NLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAIS 77
L L+I+ +AY PYS +GA L+ +D +++TG N+ENASY +T C E+TAI KAIS
Sbjct: 5 ELIELAIETSKHAYVPYSHFPIGAVLVAKDGSVYTGVNIENASYPLTNCGERTAIFKAIS 64
Query: 78 EGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQVGLI 134
EGQ +F + V + K +SPCG+CRQV+ EF D++V +V D+S V ++
Sbjct: 65 EGQREFSELIVYG---QTEKPISPCGACRQVMVEFFEQ--DLKVTLVAKDKSTVEMM 116
>gi|424735371|ref|ZP_18163835.1| cytidine deaminase [Lysinibacillus fusiformis ZB2]
gi|422950573|gb|EKU44941.1| cytidine deaminase [Lysinibacillus fusiformis ZB2]
Length = 137
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 52/105 (49%), Positives = 72/105 (68%), Gaps = 3/105 (2%)
Query: 23 SIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQTK 82
S +AR+ AY PYSK +VGAALL +D + GCN+ENA Y MT CAE+TA KA+SEG +
Sbjct: 12 SKKAREKAYVPYSKFKVGAALLTKDGQVIHGCNIENAGYSMTNCAERTAFFKAVSEGIYE 71
Query: 83 FKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSD 127
F+ IA+ A D++ +PCG+CRQV+ EF +P + + +K D
Sbjct: 72 FEAIAIVA---DTDGPCAPCGACRQVMMEFCAPTMPVYLTNLKGD 113
>gi|310644092|ref|YP_003948850.1| cytidine deaminase, cdd [Paenibacillus polymyxa SC2]
gi|309249042|gb|ADO58609.1| Cytidine deaminase, cdd [Paenibacillus polymyxa SC2]
gi|392304800|emb|CCI71163.1| cytidine deaminase [Paenibacillus polymyxa M1]
Length = 131
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 54/99 (54%), Positives = 70/99 (70%), Gaps = 3/99 (3%)
Query: 15 IEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISK 74
++ L +++AR AY PYS QVGAA+L D T++ GCNVENASYG+ CAE+TAI K
Sbjct: 1 MKDQLIQKALEARKQAYVPYSNFQVGAAVLGSDGTVYHGCNVENASYGLCNCAERTAIFK 60
Query: 75 AISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFS 113
+SEG K IAV+A D+ VSPCG+CRQVI+EF+
Sbjct: 61 MVSEGCRKIDSIAVAA---DTEGPVSPCGACRQVISEFA 96
>gi|228999093|ref|ZP_04158675.1| Cytidine deaminase [Bacillus mycoides Rock3-17]
gi|229006641|ref|ZP_04164275.1| Cytidine deaminase [Bacillus mycoides Rock1-4]
gi|228754502|gb|EEM03913.1| Cytidine deaminase [Bacillus mycoides Rock1-4]
gi|228760710|gb|EEM09674.1| Cytidine deaminase [Bacillus mycoides Rock3-17]
Length = 132
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/96 (55%), Positives = 67/96 (69%), Gaps = 3/96 (3%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
+ L +I+AR AY PYSK QVGAALL +D ++ GCNVENASYG+ CAE+TA+ KA+
Sbjct: 4 KELIQEAIEARKQAYVPYSKFQVGAALLTEDGKVYRGCNVENASYGLCNCAERTALFKAV 63
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEF 112
SEG F IAV A D+ + V PCG+CRQV+ E
Sbjct: 64 SEGDKAFVAIAVVA---DTKRPVPPCGACRQVMIEL 96
>gi|229029623|ref|ZP_04185700.1| Cytidine deaminase [Bacillus cereus AH1271]
gi|228731683|gb|EEL82588.1| Cytidine deaminase [Bacillus cereus AH1271]
Length = 131
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 51/103 (49%), Positives = 71/103 (68%), Gaps = 3/103 (2%)
Query: 29 NAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQTKFKRIAV 88
AY PYSK VGAAL+ ++ I+TGCN+ENASYG+ CAE+TAI KA+SEG+ F + +
Sbjct: 16 KAYIPYSKFPVGAALVTKEGKIYTGCNIENASYGLCNCAERTAIFKAVSEGERDFSYLVI 75
Query: 89 SAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQV 131
+ +++ +SPCG+CRQVIAEF P + + VK D +V
Sbjct: 76 TG---ETDGPISPCGACRQVIAEFCEPKMPVLLTNVKGDEKEV 115
>gi|419530498|ref|ZP_14070025.1| cytidine deaminase [Streptococcus pneumoniae GA40028]
gi|379573406|gb|EHZ38361.1| cytidine deaminase [Streptococcus pneumoniae GA40028]
Length = 124
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 52/115 (45%), Positives = 76/115 (66%), Gaps = 5/115 (4%)
Query: 19 LANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISE 78
+ L+I+ +AY PYS +GA L+ +D +++TG N+ENASY +T C E+TAI KAISE
Sbjct: 1 MIELAIETSKHAYVPYSHFPIGAVLVAKDGSVYTGVNIENASYPLTNCGERTAIFKAISE 60
Query: 79 GQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQVGL 133
GQ +F + V + K +SPCG+CRQV+AEF D++V +V D+S V +
Sbjct: 61 GQREFSELIVYG---QTEKPISPCGACRQVMAEFFEQ--DLKVTLVAKDKSTVEM 110
>gi|332796440|ref|YP_004457940.1| cytidine deaminase [Acidianus hospitalis W1]
gi|332694175|gb|AEE93642.1| cytidine deaminase [Acidianus hospitalis W1]
Length = 131
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 49/101 (48%), Positives = 70/101 (69%), Gaps = 3/101 (2%)
Query: 13 DPIEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAI 72
D ++ L ++ A N+Y PYS + VGAA++ +D IFTG N+EN+SYG++ICAE+ A+
Sbjct: 5 DLSDEKLLEIAKNATRNSYAPYSNIHVGAAIVTEDGKIFTGTNIENSSYGLSICAERVAV 64
Query: 73 SKAISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFS 113
A+S G KFK+I AI+ K + PCG+CRQV+AEFS
Sbjct: 65 FNAVSNGYRKFKKI---AIITSEGKGIMPCGACRQVLAEFS 102
>gi|218899467|ref|YP_002447878.1| cytidine deaminase [Bacillus cereus G9842]
gi|228902824|ref|ZP_04066969.1| Cytidine deaminase [Bacillus thuringiensis IBL 4222]
gi|228967366|ref|ZP_04128401.1| Cytidine deaminase [Bacillus thuringiensis serovar sotto str.
T04001]
gi|402564234|ref|YP_006606958.1| cytidine deaminase [Bacillus thuringiensis HD-771]
gi|423358662|ref|ZP_17336165.1| cytidine deaminase [Bacillus cereus VD022]
gi|434377468|ref|YP_006612112.1| cytidine deaminase [Bacillus thuringiensis HD-789]
gi|218540610|gb|ACK93004.1| cytidine deaminase [Bacillus cereus G9842]
gi|228792401|gb|EEM39968.1| Cytidine deaminase [Bacillus thuringiensis serovar sotto str.
T04001]
gi|228856833|gb|EEN01348.1| Cytidine deaminase [Bacillus thuringiensis IBL 4222]
gi|401084534|gb|EJP92780.1| cytidine deaminase [Bacillus cereus VD022]
gi|401792886|gb|AFQ18925.1| cytidine deaminase [Bacillus thuringiensis HD-771]
gi|401876025|gb|AFQ28192.1| cytidine deaminase [Bacillus thuringiensis HD-789]
Length = 132
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 52/90 (57%), Positives = 65/90 (72%), Gaps = 3/90 (3%)
Query: 23 SIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQTK 82
+I+AR AY PYSK QVGAALL D ++ GCNVENASYG+ CAE+TA+ KA+SEG +
Sbjct: 10 AIEARKQAYVPYSKFQVGAALLTSDGKVYRGCNVENASYGLCNCAERTALFKAVSEGDKE 69
Query: 83 FKRIAVSAILPDSNKFVSPCGSCRQVIAEF 112
F IAV A D+ + V PCG+CRQV+ E
Sbjct: 70 FVAIAVVA---DTKRPVPPCGACRQVMVEL 96
>gi|313225505|emb|CBY06979.1| unnamed protein product [Oikopleura dioica]
Length = 137
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 50/114 (43%), Positives = 74/114 (64%), Gaps = 7/114 (6%)
Query: 27 RDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQTKFKRI 86
R+NAY PYSK +VGAALL D IFTGCNVEN +YG CAE+T I KA+SEG F
Sbjct: 17 RENAYAPYSKFRVGAALLTSDGKIFTGCNVENLAYGSATCAERTGICKAVSEGSRHFTAC 76
Query: 87 AVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQVGLITIDGMY 140
+++ L D ++ PCG+CRQ +AEF D+ +++ K++ + ++ + ++
Sbjct: 77 MITSDLED---WIYPCGNCRQTLAEFG----DLTLILTKNEGEETKIMKLSEIH 123
>gi|417847962|ref|ZP_12493920.1| cytidine deaminase [Streptococcus mitis SK1073]
gi|339455862|gb|EGP68460.1| cytidine deaminase [Streptococcus mitis SK1073]
Length = 129
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/116 (45%), Positives = 75/116 (64%), Gaps = 5/116 (4%)
Query: 18 NLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAIS 77
L L+I+ AY PYS V A L+ +D +I+TG N+ENASY +T C E+TAI KA+S
Sbjct: 5 ELIELAIETSKKAYVPYSHFPVSAVLVAKDGSIYTGVNIENASYSLTNCGERTAIFKAVS 64
Query: 78 EGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQVGL 133
EGQ +F + V ++ K +SPCG+CRQV+AEF D++V +V D+S V +
Sbjct: 65 EGQREFSELIVYG---ETEKPISPCGACRQVMAEFFEQ--DLKVTLVAKDKSTVEM 115
>gi|319651595|ref|ZP_08005722.1| cytidine deaminase [Bacillus sp. 2_A_57_CT2]
gi|317396662|gb|EFV77373.1| cytidine deaminase [Bacillus sp. 2_A_57_CT2]
Length = 132
Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 54/102 (52%), Positives = 68/102 (66%), Gaps = 3/102 (2%)
Query: 26 ARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQTKFKR 85
ARD AY PYSK +VGAALL D +F GCN+ENA+Y M CAE+TA+ KA S+G F
Sbjct: 13 ARDRAYVPYSKFKVGAALLSSDGQVFHGCNIENAAYSMCNCAERTALFKAYSDGVKSFSA 72
Query: 86 IAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSD 127
IAV A D+++ V PCG+CRQVIAE P + + +K D
Sbjct: 73 IAVVA---DTDRPVPPCGACRQVIAELCPPEMKVVLTNLKGD 111
>gi|291559006|emb|CBL37806.1| cytidine deaminase [butyrate-producing bacterium SSC/2]
Length = 125
Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 52/107 (48%), Positives = 75/107 (70%), Gaps = 4/107 (3%)
Query: 16 EQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKA 75
+Q L + + +A++ AY PYS+ QVGAA+L ++ +FTGCNVEN+SYG ICAE+TA KA
Sbjct: 3 DQELLDFADKAKEKAYAPYSRFQVGAAILTKEGKVFTGCNVENSSYGAAICAERTAAVKA 62
Query: 76 ISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVL 122
+SEG F+ IA+++ D V PCG CRQ + EF+S D++V+
Sbjct: 63 VSEGYHDFEMIAIASNGSDKET-VYPCGICRQFLHEFNS---DLKVI 105
>gi|24379554|ref|NP_721509.1| cytidine deaminase [Streptococcus mutans UA159]
gi|387786098|ref|YP_006251194.1| putative cytidine deaminase [Streptococcus mutans LJ23]
gi|449864464|ref|ZP_21778364.1| cytidine deaminase [Streptococcus mutans U2B]
gi|449870529|ref|ZP_21780701.1| cytidine deaminase [Streptococcus mutans 8ID3]
gi|449908840|ref|ZP_21793980.1| cytidine deaminase [Streptococcus mutans OMZ175]
gi|449937206|ref|ZP_21804437.1| cytidine deaminase [Streptococcus mutans 2ST1]
gi|449965006|ref|ZP_21811621.1| cytidine deaminase [Streptococcus mutans 15VF2]
gi|449979421|ref|ZP_21816657.1| cytidine deaminase [Streptococcus mutans 5SM3]
gi|449984869|ref|ZP_21819340.1| cytidine deaminase [Streptococcus mutans NFSM2]
gi|450070766|ref|ZP_21847747.1| cytidine deaminase [Streptococcus mutans M2A]
gi|450075872|ref|ZP_21849519.1| cytidine deaminase [Streptococcus mutans N3209]
gi|450087047|ref|ZP_21854033.1| cytidine deaminase [Streptococcus mutans NV1996]
gi|450120351|ref|ZP_21865665.1| cytidine deaminase [Streptococcus mutans ST6]
gi|450131755|ref|ZP_21869694.1| cytidine deaminase [Streptococcus mutans NLML8]
gi|450155637|ref|ZP_21878371.1| cytidine deaminase [Streptococcus mutans 21]
gi|24377498|gb|AAN58815.1|AE014949_8 putative cytidine deaminase [Streptococcus mutans UA159]
gi|379132499|dbj|BAL69251.1| putative cytidine deaminase [Streptococcus mutans LJ23]
gi|449153528|gb|EMB57185.1| cytidine deaminase [Streptococcus mutans NLML8]
gi|449156437|gb|EMB59906.1| cytidine deaminase [Streptococcus mutans 8ID3]
gi|449164665|gb|EMB67713.1| cytidine deaminase [Streptococcus mutans 2ST1]
gi|449171795|gb|EMB74442.1| cytidine deaminase [Streptococcus mutans 15VF2]
gi|449177953|gb|EMB80235.1| cytidine deaminase [Streptococcus mutans 5SM3]
gi|449179803|gb|EMB81994.1| cytidine deaminase [Streptococcus mutans NFSM2]
gi|449213307|gb|EMC13645.1| cytidine deaminase [Streptococcus mutans M2A]
gi|449213641|gb|EMC13972.1| cytidine deaminase [Streptococcus mutans N3209]
gi|449218446|gb|EMC18452.1| cytidine deaminase [Streptococcus mutans NV1996]
gi|449230260|gb|EMC29526.1| cytidine deaminase [Streptococcus mutans ST6]
gi|449237058|gb|EMC35951.1| cytidine deaminase [Streptococcus mutans 21]
gi|449262241|gb|EMC59695.1| cytidine deaminase [Streptococcus mutans OMZ175]
gi|449264888|gb|EMC62221.1| cytidine deaminase [Streptococcus mutans U2B]
Length = 128
Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/114 (46%), Positives = 74/114 (64%), Gaps = 4/114 (3%)
Query: 18 NLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAIS 77
+L +I+A NAY PYS +GAAL + I+ GCN+ENAS+G+T C E+TAI KAIS
Sbjct: 4 DLIRTAIKASKNAYVPYSHFPIGAALKTKSGKIYQGCNIENASFGLTNCGERTAIFKAIS 63
Query: 78 EGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQV 131
EG + IA+ ++ K +SPCG+CRQV+AEF P+ + LI K ++ V
Sbjct: 64 EGYRDLEEIAIYG---ETQKPISPCGACRQVMAEFFEPSAKV-TLIAKGGKTVV 113
>gi|295100995|emb|CBK98540.1| cytidine deaminase, homotetrameric [Faecalibacterium prausnitzii
L2-6]
Length = 310
Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 56/113 (49%), Positives = 75/113 (66%), Gaps = 4/113 (3%)
Query: 16 EQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKA 75
+Q L +++ AR+ AY PYS VGAAL +D IFTGCNVENA++ T CAE+TA+ KA
Sbjct: 170 KQELIRMALAARERAYTPYSDFMVGAALRAEDGRIFTGCNVENAAFTPTSCAERTALFKA 229
Query: 76 ISEGQTKFKRIA-VSAILPDSNK-FVSPCGSCRQVIAEFSSPACDIQVLIVKS 126
++EG T+F IA V A + NK SPCG CRQ + EF P ++ V++ KS
Sbjct: 230 VAEGVTRFTDIAVVGARRGEVNKQITSPCGVCRQALFEFGGP--ELNVIMAKS 280
>gi|295704929|ref|YP_003598004.1| cytidine deaminase [Bacillus megaterium DSM 319]
gi|294802588|gb|ADF39654.1| cytidine deaminase [Bacillus megaterium DSM 319]
Length = 132
Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 58/125 (46%), Positives = 79/125 (63%), Gaps = 15/125 (12%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
+ L + +I A A+ PYS VGAALL D I+ GCN+ENASYG+T CAE+TAI KA+
Sbjct: 4 KQLIDEAIVASKQAHVPYSHFHVGAALLTTDGKIYRGCNIENASYGLTNCAERTAIFKAV 63
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQVGLITI 136
SEG +F IAV + D++ +SPCG+CRQV+AEF CD D +Q+ L +
Sbjct: 64 SEGDKQFSAIAV---VGDTDGPISPCGACRQVLAEF----CD--------DHTQIILANL 108
Query: 137 DGMYL 141
G ++
Sbjct: 109 KGDFV 113
>gi|257457453|ref|ZP_05622623.1| cytidine deaminase [Treponema vincentii ATCC 35580]
gi|257445182|gb|EEV20255.1| cytidine deaminase [Treponema vincentii ATCC 35580]
Length = 137
Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 54/123 (43%), Positives = 78/123 (63%), Gaps = 5/123 (4%)
Query: 18 NLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAIS 77
+L +++A NAY PYS +VGAALL D ++ TG NVEN SYG+T CAE+TAI +A++
Sbjct: 9 HLFEQALEAAKNAYAPYSHFRVGAALLLDDGSVVTGVNVENRSYGLTNCAERTAIFRAVA 68
Query: 78 EGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQVGLITID 137
G+ F IA++ PD++ V PCG+CRQVI+EF P + +R + T+
Sbjct: 69 MGKKNFTAIAIAT--PDADYPVGPCGACRQVISEFMKPEAPVIFGSSAGNRIET---TVS 123
Query: 138 GMY 140
G+Y
Sbjct: 124 GVY 126
>gi|423561231|ref|ZP_17537507.1| cytidine deaminase [Bacillus cereus MSX-A1]
gi|401201488|gb|EJR08353.1| cytidine deaminase [Bacillus cereus MSX-A1]
Length = 132
Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 52/90 (57%), Positives = 65/90 (72%), Gaps = 3/90 (3%)
Query: 23 SIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQTK 82
+I+AR AY PYSK QVGAALL D ++ GCNVENASYG+ CAE+TA+ KA+SEG +
Sbjct: 10 AIEARKQAYVPYSKFQVGAALLTSDGKVYRGCNVENASYGLCNCAERTALFKAVSEGDKE 69
Query: 83 FKRIAVSAILPDSNKFVSPCGSCRQVIAEF 112
F IAV A D+ + V PCG+CRQV+ E
Sbjct: 70 FVAIAVVA---DTKRPVPPCGACRQVMVEL 96
>gi|320160273|ref|YP_004173497.1| cytidine deaminase [Anaerolinea thermophila UNI-1]
gi|319994126|dbj|BAJ62897.1| cytidine deaminase [Anaerolinea thermophila UNI-1]
Length = 138
Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 56/112 (50%), Positives = 75/112 (66%), Gaps = 8/112 (7%)
Query: 13 DPIEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAI 72
D +Q L ++QAR AY PYS +VGAALL I+ G NVENA+Y +T+CAE+TA+
Sbjct: 5 DEQKQTLIQTALQARRWAYAPYSNYRVGAALLTDSGKIYDGVNVENAAYPVTMCAERTAV 64
Query: 73 SKAISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIV 124
KA+SEG+ +F IAV+ + +PCGSCRQV+AEF DIQV++V
Sbjct: 65 FKAVSEGERRFVAIAVA-----TANGGTPCGSCRQVLAEF---GLDIQVIVV 108
>gi|375310473|ref|ZP_09775744.1| cytidine deaminase [Paenibacillus sp. Aloe-11]
gi|375077622|gb|EHS55859.1| cytidine deaminase [Paenibacillus sp. Aloe-11]
Length = 131
Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 55/99 (55%), Positives = 70/99 (70%), Gaps = 3/99 (3%)
Query: 15 IEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISK 74
++ L +++AR AY PYS QVGAA+L D TI++GCNVENASYG+ CAE+TAI K
Sbjct: 1 MKDQLIQEALEARKQAYIPYSNFQVGAAVLGSDGTIYSGCNVENASYGLCNCAERTAIFK 60
Query: 75 AISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFS 113
+SEG K IAV A D+ VSPCG+CRQVI+EF+
Sbjct: 61 MVSEGCRKIDAIAVVA---DTEGPVSPCGACRQVISEFA 96
>gi|418963638|ref|ZP_13515473.1| cytidine deaminase [Streptococcus anginosus subsp. whileyi CCUG
39159]
gi|383342962|gb|EID21162.1| cytidine deaminase [Streptococcus anginosus subsp. whileyi CCUG
39159]
Length = 129
Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/113 (46%), Positives = 76/113 (67%), Gaps = 5/113 (4%)
Query: 19 LANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISE 78
L +L+I+ AY PYS +GA L+ ++ IFTG N+ENAS+G+T C E+ AI KA+SE
Sbjct: 6 LIDLAIETSKKAYVPYSHFPIGAVLVAKNGQIFTGVNIENASFGLTNCGERAAIFKAVSE 65
Query: 79 GQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQV 131
G T F+ + V ++ + VSPCG+CRQV+AEF S D++V +V D+S V
Sbjct: 66 GVTDFEELIVYG---ETEQPVSPCGACRQVMAEFFSK--DLKVTLVAKDKSTV 113
>gi|390454138|ref|ZP_10239666.1| cytidine deaminase [Paenibacillus peoriae KCTC 3763]
Length = 131
Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 55/99 (55%), Positives = 70/99 (70%), Gaps = 3/99 (3%)
Query: 15 IEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISK 74
++ L +++AR AY PYS QVGAA+L D TI++GCNVENASYG+ CAE+TAI K
Sbjct: 1 MKDQLIQEALEARKQAYIPYSNFQVGAAVLGSDGTIYSGCNVENASYGLCNCAERTAIFK 60
Query: 75 AISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFS 113
+SEG K IAV A D+ VSPCG+CRQVI+EF+
Sbjct: 61 MVSEGCRKIDAIAVVA---DTEGPVSPCGACRQVISEFA 96
>gi|409081151|gb|EKM81510.1| hypothetical protein AGABI1DRAFT_69771 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 159
Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 55/117 (47%), Positives = 73/117 (62%), Gaps = 5/117 (4%)
Query: 16 EQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKA 75
+ L + +A++ Y PYSK VGAAL+ D +I G N+ENASYG TICAE+TA+ KA
Sbjct: 13 RKRLIEAAFEAKNGTYSPYSKFPVGAALMAADGSIIKGANIENASYGATICAERTALVKA 72
Query: 76 ISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQVG 132
ISEG F +AV++ + +SPCG CRQ I EF S D+ +L+V D Q G
Sbjct: 73 ISEGVRSFVALAVTS---NVKSAISPCGICRQFIREFCS--LDMPILLVPGDYPQAG 124
>gi|293556582|ref|ZP_06675150.1| cytidine deaminase [Enterococcus faecium E1039]
gi|293571208|ref|ZP_06682243.1| cytidine deaminase [Enterococcus faecium E980]
gi|430842511|ref|ZP_19460425.1| cytidine deaminase [Enterococcus faecium E1007]
gi|430853306|ref|ZP_19471036.1| cytidine deaminase [Enterococcus faecium E1258]
gi|431081726|ref|ZP_19495816.1| cytidine deaminase [Enterococcus faecium E1604]
gi|431117317|ref|ZP_19498034.1| cytidine deaminase [Enterococcus faecium E1613]
gi|431438027|ref|ZP_19513190.1| cytidine deaminase [Enterococcus faecium E1630]
gi|431739088|ref|ZP_19528028.1| cytidine deaminase [Enterococcus faecium E1972]
gi|431740631|ref|ZP_19529542.1| cytidine deaminase [Enterococcus faecium E2039]
gi|431760056|ref|ZP_19548660.1| cytidine deaminase [Enterococcus faecium E3346]
gi|291601258|gb|EFF31542.1| cytidine deaminase [Enterococcus faecium E1039]
gi|291608719|gb|EFF38006.1| cytidine deaminase [Enterococcus faecium E980]
gi|430493004|gb|ELA69337.1| cytidine deaminase [Enterococcus faecium E1007]
gi|430541128|gb|ELA81305.1| cytidine deaminase [Enterococcus faecium E1258]
gi|430565658|gb|ELB04804.1| cytidine deaminase [Enterococcus faecium E1604]
gi|430568258|gb|ELB07311.1| cytidine deaminase [Enterococcus faecium E1613]
gi|430586862|gb|ELB25104.1| cytidine deaminase [Enterococcus faecium E1630]
gi|430596631|gb|ELB34455.1| cytidine deaminase [Enterococcus faecium E1972]
gi|430602714|gb|ELB40264.1| cytidine deaminase [Enterococcus faecium E2039]
gi|430625325|gb|ELB61965.1| cytidine deaminase [Enterococcus faecium E3346]
Length = 132
Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 52/110 (47%), Positives = 73/110 (66%), Gaps = 5/110 (4%)
Query: 15 IEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISK 74
++Q N +I+A D AY PYS VGA L+ + I+ G N+ENAS+G+T CAE+TA K
Sbjct: 4 LKQEWINTAIEALDKAYVPYSHFPVGACLVTESGKIYQGINIENASFGLTNCAERTAFFK 63
Query: 75 AISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIV 124
A+SEG+ F + V+ PD +SPCG+CRQV+AEF +P D+ V +V
Sbjct: 64 AVSEGERSFTHLVVAGHTPDP---ISPCGACRQVMAEFCAP--DMPVTLV 108
>gi|386577948|ref|YP_006074354.1| Cytidine deaminase [Streptococcus suis GZ1]
gi|292558411|gb|ADE31412.1| Cytidine deaminase [Streptococcus suis GZ1]
Length = 134
Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 58/127 (45%), Positives = 80/127 (62%), Gaps = 7/127 (5%)
Query: 7 MEFSALDPIEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTIC 66
ME ++ I +L L+++ AY PYSK V A L+ + IFTG N+ENAS+G+T C
Sbjct: 1 MEHRRMETI--DLIELAVKNSQKAYVPYSKFPVSAVLVAKTGEIFTGVNIENASFGLTNC 58
Query: 67 AEKTAISKAISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKS 126
AE+TAI KAISEG F I I ++ K +SPCG+CRQV+AEF D++V +V
Sbjct: 59 AERTAIFKAISEGVKDFSEI---IIYGETEKPISPCGACRQVMAEFFDK--DLKVTLVAK 113
Query: 127 DRSQVGL 133
D+S V +
Sbjct: 114 DKSTVEM 120
>gi|15675193|ref|NP_269367.1| cytidine deaminase [Streptococcus pyogenes SF370]
gi|13622359|gb|AAK34088.1| putative cytidine deaminase [Streptococcus pyogenes M1 GAS]
Length = 129
Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 54/112 (48%), Positives = 77/112 (68%), Gaps = 4/112 (3%)
Query: 18 NLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAIS 77
+L + ++QA + AY PYS VGAAL +D TI+TGCN+EN S+G+T C E+TAI KAIS
Sbjct: 5 DLVSCAVQASEYAYVPYSHFPVGAALKTKDGTIYTGCNIENVSFGLTNCGERTAIFKAIS 64
Query: 78 EGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRS 129
+G + I AI ++ + VSPCG+CRQV+AEF P+ + LI K+ ++
Sbjct: 65 DGHKELVEI---AIYGETMQPVSPCGACRQVMAEFFDPS-SLVTLIAKNGQT 112
>gi|449950195|ref|ZP_21808172.1| cytidine deaminase [Streptococcus mutans 11SSST2]
gi|450004811|ref|ZP_21826274.1| cytidine deaminase [Streptococcus mutans NMT4863]
gi|450050215|ref|ZP_21840134.1| cytidine deaminase [Streptococcus mutans NFSM1]
gi|449167395|gb|EMB70282.1| cytidine deaminase [Streptococcus mutans 11SSST2]
gi|449189380|gb|EMB91047.1| cytidine deaminase [Streptococcus mutans NMT4863]
gi|449202833|gb|EMC03722.1| cytidine deaminase [Streptococcus mutans NFSM1]
Length = 128
Score = 106 bits (265), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/114 (46%), Positives = 74/114 (64%), Gaps = 4/114 (3%)
Query: 18 NLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAIS 77
+L +I+A NAY PYS +GAAL + I+ GCN+ENAS+G+T C E+TAI KAIS
Sbjct: 4 DLIRTAIEASKNAYVPYSHFPIGAALKTKSGKIYQGCNIENASFGLTNCGERTAIFKAIS 63
Query: 78 EGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQV 131
EG + IA+ ++ K +SPCG+CRQV+AEF P+ + LI K ++ V
Sbjct: 64 EGYRDLEEIAIYG---ETQKPISPCGACRQVMAEFFEPSAKV-TLIAKDGKTVV 113
>gi|414158651|ref|ZP_11414945.1| cytidine deaminase [Streptococcus sp. F0441]
gi|410871196|gb|EKS19153.1| cytidine deaminase [Streptococcus sp. F0441]
Length = 129
Score = 106 bits (265), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 52/116 (44%), Positives = 74/116 (63%), Gaps = 5/116 (4%)
Query: 18 NLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAIS 77
L L+I+ AY PYS +GA L+ +D +I+TG N+ENASY +T C E+TAI KA+S
Sbjct: 5 ELIELAIETSKQAYVPYSHFPIGAVLVAKDGSIYTGVNIENASYSLTNCGERTAIFKAVS 64
Query: 78 EGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQVGL 133
EGQ +F + V + K +SPCG+CRQV+ EF D++V +V D+S V +
Sbjct: 65 EGQREFSELIVYG---QTEKPISPCGACRQVMVEFFEK--DLKVTLVAKDKSTVEM 115
>gi|331266186|ref|YP_004325816.1| cytidine deaminase [Streptococcus oralis Uo5]
gi|406577699|ref|ZP_11053295.1| cytidine deaminase [Streptococcus sp. GMD6S]
gi|419817690|ref|ZP_14341838.1| cytidine deaminase [Streptococcus sp. GMD4S]
gi|326682858|emb|CBZ00475.1| cytidine deaminase [Streptococcus oralis Uo5]
gi|404459617|gb|EKA05957.1| cytidine deaminase [Streptococcus sp. GMD6S]
gi|404465579|gb|EKA11000.1| cytidine deaminase [Streptococcus sp. GMD4S]
Length = 129
Score = 106 bits (265), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 52/115 (45%), Positives = 75/115 (65%), Gaps = 5/115 (4%)
Query: 19 LANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISE 78
L L+I+ NAY PYS +GA L+ +D +I+TG N+ENASY +T C E+TAI KA+SE
Sbjct: 6 LIELAIETSKNAYVPYSHFPIGAVLVAKDGSIYTGVNIENASYPLTNCGERTAIFKAVSE 65
Query: 79 GQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQVGL 133
G+ +F + V + K +SPCG+CRQV+ EF D++V +V D+S V +
Sbjct: 66 GKREFSELIVYG---QTEKPISPCGACRQVMVEFFEQ--DLKVTLVAKDKSTVEM 115
>gi|426196383|gb|EKV46311.1| hypothetical protein AGABI2DRAFT_205453 [Agaricus bisporus var.
bisporus H97]
Length = 159
Score = 106 bits (265), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 55/117 (47%), Positives = 73/117 (62%), Gaps = 5/117 (4%)
Query: 16 EQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKA 75
+ L + +A++ Y PYSK VGAAL+ D +I G N+ENASYG TICAE+TA+ KA
Sbjct: 13 RKRLIEAAFEAKNGTYSPYSKFPVGAALMAADGSIIKGANIENASYGATICAERTALVKA 72
Query: 76 ISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQVG 132
ISEG F +AV++ + +SPCG CRQ I EF S D+ +L+V D Q G
Sbjct: 73 ISEGVRSFVALAVTS---NVKSAISPCGICRQFIREFCS--LDMPILLVPGDYPQAG 124
>gi|148997081|ref|ZP_01824735.1| cytidine deaminase [Streptococcus pneumoniae SP11-BS70]
gi|168575499|ref|ZP_02721435.1| cytidine deaminase [Streptococcus pneumoniae MLV-016]
gi|194398262|ref|YP_002037479.1| cytidine deaminase [Streptococcus pneumoniae G54]
gi|225854350|ref|YP_002735862.1| cytidine deaminase [Streptococcus pneumoniae JJA]
gi|225856510|ref|YP_002738021.1| cytidine deaminase [Streptococcus pneumoniae P1031]
gi|307067440|ref|YP_003876406.1| cytidine deaminase [Streptococcus pneumoniae AP200]
gi|418120912|ref|ZP_12757858.1| cytidine deaminase [Streptococcus pneumoniae GA44194]
gi|418977036|ref|ZP_13524874.1| cytidine deaminase [Streptococcus mitis SK575]
gi|419470796|ref|ZP_14010655.1| cytidine deaminase [Streptococcus pneumoniae GA07914]
gi|419490762|ref|ZP_14030502.1| cytidine deaminase [Streptococcus pneumoniae GA47179]
gi|419503645|ref|ZP_14043316.1| cytidine deaminase [Streptococcus pneumoniae GA47760]
gi|419532070|ref|ZP_14071588.1| cytidine deaminase [Streptococcus pneumoniae GA47794]
gi|421233833|ref|ZP_15690455.1| cytidine deaminase [Streptococcus pneumoniae 2061617]
gi|421238470|ref|ZP_15695039.1| cytidine deaminase [Streptococcus pneumoniae 2071247]
gi|421240399|ref|ZP_15696946.1| cytidine deaminase [Streptococcus pneumoniae 2080913]
gi|421242292|ref|ZP_15698819.1| cytidine deaminase [Streptococcus pneumoniae 2081074]
gi|421244663|ref|ZP_15701166.1| cytidine deaminase [Streptococcus pneumoniae 2081685]
gi|421249138|ref|ZP_15705601.1| cytidine deaminase [Streptococcus pneumoniae 2082239]
gi|421274744|ref|ZP_15725576.1| cytidine deaminase [Streptococcus pneumoniae GA52612]
gi|421314009|ref|ZP_15764599.1| cytidine deaminase [Streptococcus pneumoniae GA47562]
gi|147756781|gb|EDK63821.1| cytidine deaminase [Streptococcus pneumoniae SP11-BS70]
gi|183578488|gb|EDT99016.1| cytidine deaminase [Streptococcus pneumoniae MLV-016]
gi|194357929|gb|ACF56377.1| cytidine deaminase [Streptococcus pneumoniae G54]
gi|225722690|gb|ACO18543.1| cytidine deaminase [Streptococcus pneumoniae JJA]
gi|225725802|gb|ACO21654.1| cytidine deaminase [Streptococcus pneumoniae P1031]
gi|306408977|gb|ADM84404.1| Cytidine deaminase [Streptococcus pneumoniae AP200]
gi|353793739|gb|EHD74098.1| cytidine deaminase [Streptococcus pneumoniae GA44194]
gi|379545512|gb|EHZ10651.1| cytidine deaminase [Streptococcus pneumoniae GA07914]
gi|379594341|gb|EHZ59151.1| cytidine deaminase [Streptococcus pneumoniae GA47179]
gi|379608826|gb|EHZ73571.1| cytidine deaminase [Streptococcus pneumoniae GA47794]
gi|379609243|gb|EHZ73984.1| cytidine deaminase [Streptococcus pneumoniae GA47760]
gi|383350562|gb|EID28428.1| cytidine deaminase [Streptococcus mitis SK575]
gi|395602730|gb|EJG62872.1| cytidine deaminase [Streptococcus pneumoniae 2061617]
gi|395603057|gb|EJG63198.1| cytidine deaminase [Streptococcus pneumoniae 2071247]
gi|395608981|gb|EJG69071.1| cytidine deaminase [Streptococcus pneumoniae 2080913]
gi|395610321|gb|EJG70400.1| cytidine deaminase [Streptococcus pneumoniae 2081685]
gi|395611625|gb|EJG71693.1| cytidine deaminase [Streptococcus pneumoniae 2081074]
gi|395615767|gb|EJG75783.1| cytidine deaminase [Streptococcus pneumoniae 2082239]
gi|395875472|gb|EJG86553.1| cytidine deaminase [Streptococcus pneumoniae GA52612]
gi|395914509|gb|EJH25353.1| cytidine deaminase [Streptococcus pneumoniae GA47562]
Length = 129
Score = 106 bits (265), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 52/116 (44%), Positives = 75/116 (64%), Gaps = 5/116 (4%)
Query: 18 NLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAIS 77
L L+I+ +AY PYS +GA L+ +D +++TG N+ENASY +T C E+TAI KAIS
Sbjct: 5 ELIELAIETSKHAYVPYSHFPIGAVLVAKDGSVYTGVNIENASYPLTNCGERTAIFKAIS 64
Query: 78 EGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQVGL 133
EGQ +F + V + K +SPCG+CRQV+ EF D++V +V D+S V +
Sbjct: 65 EGQREFSELIVYG---QTEKPISPCGACRQVMVEFFEQ--DLKVTLVAKDKSTVEM 115
>gi|357636926|ref|ZP_09134801.1| cytidine deaminase [Streptococcus macacae NCTC 11558]
gi|357585380|gb|EHJ52583.1| cytidine deaminase [Streptococcus macacae NCTC 11558]
Length = 128
Score = 106 bits (265), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 53/112 (47%), Positives = 73/112 (65%), Gaps = 4/112 (3%)
Query: 18 NLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAIS 77
+L +I+A NAY PYS +GAA+ +D I+ GCN+ENAS+G+T C E+TAI KAIS
Sbjct: 4 DLIRSAIEASQNAYVPYSHFPIGAAVKAKDGQIYQGCNIENASFGLTNCGERTAIFKAIS 63
Query: 78 EGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRS 129
EGQ + I AI ++ + +SPCG+CRQV+AEF P + L K R+
Sbjct: 64 EGQRDLEEI---AIYGETQEPISPCGACRQVMAEFFEPTAQV-TLAAKDGRT 111
>gi|322392140|ref|ZP_08065602.1| cytidine deaminase [Streptococcus peroris ATCC 700780]
gi|321145040|gb|EFX40439.1| cytidine deaminase [Streptococcus peroris ATCC 700780]
Length = 129
Score = 106 bits (265), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 50/116 (43%), Positives = 75/116 (64%), Gaps = 5/116 (4%)
Query: 18 NLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAIS 77
L +L+I+ AY PYS +GA L+ D +I+TG N+ENAS+ +T C E+TAI KA+S
Sbjct: 5 ELIDLAIETSKQAYVPYSHFPIGAVLVANDGSIYTGVNIENASFSLTNCGERTAIFKAVS 64
Query: 78 EGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQVGL 133
EGQ F + V ++ + +SPCG+CRQV+ EF P D++V +V D++ V +
Sbjct: 65 EGQRDFSELIVYG---ETERPISPCGACRQVMVEFFKP--DLKVTLVAKDKTTVEM 115
>gi|195339130|ref|XP_002036174.1| GM16858 [Drosophila sechellia]
gi|194130054|gb|EDW52097.1| GM16858 [Drosophila sechellia]
Length = 170
Score = 106 bits (265), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 57/124 (45%), Positives = 76/124 (61%), Gaps = 5/124 (4%)
Query: 4 HDIMEFSALDPIEQNLANLSIQARDNAYCPYSKLQVGAALLCQ-DDTIFTGCNVENASYG 62
++ F +LDP Q L + Q R AY PYS +VGAA + D IF GCNVENA++
Sbjct: 15 EEVATFGSLDPSIQELLTAAFQVRQRAYVPYSGFKVGAAFRAKVDGQIFAGCNVENAAFT 74
Query: 63 MTICAEKTAISKAISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVL 122
CAE+TAI+KA+SEG T+F AV A PD F +PCG CRQ I EF++ DI +
Sbjct: 75 PCSCAERTAIAKAVSEGATEFSAGAVLAYEPDV--FTTPCGVCRQFIREFAN--ADIPIY 130
Query: 123 IVKS 126
+ ++
Sbjct: 131 VAQA 134
>gi|418182441|ref|ZP_12819002.1| cytidine deaminase [Streptococcus pneumoniae GA43380]
gi|353850678|gb|EHE30682.1| cytidine deaminase [Streptococcus pneumoniae GA43380]
Length = 129
Score = 106 bits (265), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 52/116 (44%), Positives = 75/116 (64%), Gaps = 5/116 (4%)
Query: 18 NLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAIS 77
L L+I+ +AY PYS +GA L+ +D +++TG N+ENASY +T C E+TAI KAIS
Sbjct: 5 ELIELAIETSKHAYVPYSHFPIGAVLVAKDRSVYTGVNIENASYPLTNCGERTAIFKAIS 64
Query: 78 EGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQVGL 133
EGQ +F + V + K +SPCG+CRQV+ EF D++V +V D+S V +
Sbjct: 65 EGQREFSELIVYG---QTEKPISPCGACRQVMVEFFEQ--DLKVTLVAKDKSTVEM 115
>gi|194863067|ref|XP_001970260.1| GG10526 [Drosophila erecta]
gi|190662127|gb|EDV59319.1| GG10526 [Drosophila erecta]
Length = 170
Score = 106 bits (265), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 57/124 (45%), Positives = 77/124 (62%), Gaps = 5/124 (4%)
Query: 4 HDIMEFSALDPIEQNLANLSIQARDNAYCPYSKLQVGAALLCQ-DDTIFTGCNVENASYG 62
+++ F +LDP Q L + Q R AY PYS +VGAA + IFTGCNVENA++
Sbjct: 15 EEVVSFGSLDPSVQELLTAAFQVRQRAYVPYSGFKVGAAFRAKAGGQIFTGCNVENAAFT 74
Query: 63 MTICAEKTAISKAISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVL 122
CAE+TAI+KA+SEG T+F AV A PD F +PCG CRQ I EF++ DI +
Sbjct: 75 PCSCAERTAIAKAVSEGATEFSAGAVLAYEPDV--FTTPCGVCRQFIREFAN--GDIPIY 130
Query: 123 IVKS 126
+ ++
Sbjct: 131 VAQA 134
>gi|431891312|gb|ELK02189.1| Cytidine deaminase [Pteropus alecto]
Length = 202
Score = 106 bits (265), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 56/105 (53%), Positives = 72/105 (68%), Gaps = 3/105 (2%)
Query: 11 ALDPIE-QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEK 69
AL P + Q L S +A+ AYCPYS VGAA+L + IF+GCN+ENA Y + ICAE+
Sbjct: 9 ALKPEQVQQLLLSSQEAKKFAYCPYSHFPVGAAVLTRSGRIFSGCNIENACYPLGICAER 68
Query: 70 TAISKAISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSS 114
TAI KA+SEG F IA+++ L D F+SPCG+CRQV+ E SS
Sbjct: 69 TAIQKAVSEGHKDFSAIAIASDLQD--DFISPCGACRQVMREVSS 111
>gi|71910756|ref|YP_282306.1| cytidine deaminase [Streptococcus pyogenes MGAS5005]
gi|383480088|ref|YP_005388982.1| Cytidine deaminase, Cdd [Streptococcus pyogenes MGAS15252]
gi|383494004|ref|YP_005411680.1| Cytidine deaminase, Cdd [Streptococcus pyogenes MGAS1882]
gi|410680612|ref|YP_006933014.1| cytidine deaminase [Streptococcus pyogenes A20]
gi|71853538|gb|AAZ51561.1| cytidine deaminase [Streptococcus pyogenes MGAS5005]
gi|94544074|gb|ABF34122.1| Cytidine deaminase [Streptococcus pyogenes MGAS10270]
gi|378928078|gb|AFC66284.1| Cytidine deaminase, Cdd [Streptococcus pyogenes MGAS15252]
gi|378929732|gb|AFC68149.1| Cytidine deaminase, Cdd [Streptococcus pyogenes MGAS1882]
gi|395453992|dbj|BAM30331.1| cytidine deaminase [Streptococcus pyogenes M1 476]
gi|409693201|gb|AFV38061.1| cytidine deaminase [Streptococcus pyogenes A20]
Length = 129
Score = 106 bits (265), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 54/112 (48%), Positives = 77/112 (68%), Gaps = 4/112 (3%)
Query: 18 NLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAIS 77
+L + ++QA + AY PYS VGAAL +D TI+TGCN+EN S+G+T C E+TAI KAIS
Sbjct: 5 DLVSCAVQASEYAYVPYSHFPVGAALKTKDGTIYTGCNIENVSFGLTNCGERTAIFKAIS 64
Query: 78 EGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRS 129
+G + I AI ++ + VSPCG+CRQV+AEF P+ + LI K+ ++
Sbjct: 65 DGHKELVEI---AIYGETMQPVSPCGACRQVMAEFFDPS-SLVTLIAKNGQT 112
>gi|374633168|ref|ZP_09705535.1| cytidine deaminase, homotetrameric [Metallosphaera yellowstonensis
MK1]
gi|373524652|gb|EHP69529.1| cytidine deaminase, homotetrameric [Metallosphaera yellowstonensis
MK1]
Length = 130
Score = 106 bits (265), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 52/112 (46%), Positives = 76/112 (67%), Gaps = 6/112 (5%)
Query: 13 DPIEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAI 72
DP ++ L +++ N+Y PYS+++VGAA+L + I TG NVEN+SYG+++CAE+ A+
Sbjct: 3 DPSDEQLIRSAMETAKNSYSPYSRIRVGAAILTTEGKIITGTNVENSSYGLSMCAERVAV 62
Query: 73 SKAISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIV 124
AIS G FK+IAV + K +SPCG+CRQV+ EF S DI+VL +
Sbjct: 63 FAAISMGYKNFKKIAV---VTAEGKGISPCGACRQVLHEFDS---DIEVLTL 108
>gi|418028036|ref|ZP_12666626.1| Cytidine deaminase [Streptococcus thermophilus CNCM I-1630]
gi|354688690|gb|EHE88720.1| Cytidine deaminase [Streptococcus thermophilus CNCM I-1630]
Length = 101
Score = 106 bits (265), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 50/98 (51%), Positives = 69/98 (70%), Gaps = 3/98 (3%)
Query: 15 IEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISK 74
++ ++ + +A NAY PYS +VGAALL D ++ GCN+ENAS+G+T CAE+TAI K
Sbjct: 2 VDTEISQIIEEAAGNAYVPYSHFRVGAALLTNDGQMYKGCNIENASFGLTNCAERTAIFK 61
Query: 75 AISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEF 112
A+SEG FK I V D+ + +SPCG+CRQV+AEF
Sbjct: 62 AVSEGHRDFKMIVVYG---DTEQPISPCGACRQVMAEF 96
>gi|392585949|gb|EIW75287.1| cytidine deaminase [Coniophora puteana RWD-64-598 SS2]
Length = 180
Score = 106 bits (265), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 55/109 (50%), Positives = 73/109 (66%), Gaps = 5/109 (4%)
Query: 16 EQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKA 75
+ L +I+++ AY PYSK +VGAALL D + GCNVENASYG ICAE+TAI KA
Sbjct: 17 RRKLIECAIESKGQAYAPYSKFRVGAALLSDDGKVIGGCNVENASYGGAICAERTAIVKA 76
Query: 76 ISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIV 124
+S+G TKF +AV++ D +SPCG CRQV+ EF D+ +L+V
Sbjct: 77 VSDGTTKFIALAVTS---DVATPLSPCGICRQVLREFC--PLDMPILLV 120
>gi|423524232|ref|ZP_17500705.1| cytidine deaminase [Bacillus cereus HuA4-10]
gi|401170075|gb|EJQ77316.1| cytidine deaminase [Bacillus cereus HuA4-10]
Length = 131
Score = 106 bits (265), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 51/103 (49%), Positives = 71/103 (68%), Gaps = 3/103 (2%)
Query: 29 NAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQTKFKRIAV 88
AY PYSK VGAAL+ ++ I+TGCN+ENASYG+ CAE+TAI KA+SEG+ F + +
Sbjct: 16 KAYIPYSKFPVGAALVTKEGKIYTGCNIENASYGLCNCAERTAIFKAVSEGERDFSYLVI 75
Query: 89 SAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQV 131
+ +++ +SPCG+CRQVIAEF P + + VK D +V
Sbjct: 76 TG---ETDGPISPCGACRQVIAEFCDPKMLVLLTNVKGDEKEV 115
>gi|15613929|ref|NP_242232.1| cytidine deaminase [Bacillus halodurans C-125]
gi|22256725|sp|Q9KD53.1|CDD_BACHD RecName: Full=Cytidine deaminase; Short=CDA; AltName: Full=Cytidine
aminohydrolase
gi|10173982|dbj|BAB05085.1| cytidine deaminase [Bacillus halodurans C-125]
Length = 132
Score = 106 bits (265), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 53/97 (54%), Positives = 68/97 (70%), Gaps = 3/97 (3%)
Query: 16 EQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKA 75
Q L +IQAR+ AY PYS+ QVGAALL +D ++ G N+ENASYG+T CAE+TA+ KA
Sbjct: 3 RQMLIKEAIQAREGAYVPYSRFQVGAALLMKDGSVIRGANIENASYGLTNCAERTALFKA 62
Query: 76 ISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEF 112
SEG+ IAV A D+ + V PCG+CRQV+AE
Sbjct: 63 YSEGRRDVVAIAVVA---DTKRPVPPCGACRQVMAEL 96
>gi|229004669|ref|ZP_04162406.1| Cytidine deaminase [Bacillus mycoides Rock1-4]
gi|228756557|gb|EEM05865.1| Cytidine deaminase [Bacillus mycoides Rock1-4]
Length = 131
Score = 106 bits (265), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 50/104 (48%), Positives = 71/104 (68%), Gaps = 3/104 (2%)
Query: 28 DNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQTKFKRIA 87
+ AY PYSK VGAAL+ ++ I+TGCN+ENASYG+ CAE+TAI KA+SEG+ F +
Sbjct: 15 EKAYIPYSKFPVGAALVTKEGKIYTGCNIENASYGLCNCAERTAIFKAVSEGERDFSYLV 74
Query: 88 VSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQV 131
++ ++ +SPCG+CRQVIAEF P + + +K D +V
Sbjct: 75 ITG---KTDGSISPCGACRQVIAEFCDPKMPVLLTNLKGDEKEV 115
>gi|333998592|ref|YP_004531204.1| cytidine deaminase [Treponema primitia ZAS-2]
gi|333738070|gb|AEF83560.1| cytidine deaminase [Treponema primitia ZAS-2]
Length = 132
Score = 106 bits (264), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 47/88 (53%), Positives = 64/88 (72%), Gaps = 2/88 (2%)
Query: 33 PYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQTKFKRIAVSAIL 92
PYSK +VGAALL D T++TGCNVEN S+G+ ICAE++A+ A+S GQ F +A+S
Sbjct: 20 PYSKFRVGAALLGDDGTVYTGCNVENRSFGLAICAERSAVVSAVSRGQRSFTALAIST-- 77
Query: 93 PDSNKFVSPCGSCRQVIAEFSSPACDIQ 120
PDS V PCG+CRQV++EF +P ++
Sbjct: 78 PDSRDPVGPCGACRQVLSEFMAPEAQVR 105
>gi|333371644|ref|ZP_08463589.1| cytidine deaminase [Desmospora sp. 8437]
gi|332975862|gb|EGK12740.1| cytidine deaminase [Desmospora sp. 8437]
Length = 136
Score = 106 bits (264), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 52/103 (50%), Positives = 70/103 (67%), Gaps = 3/103 (2%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
+ L + +A AY PYS VGAALL +D +F+GCNVENAS+G+T CAE+TA KA+
Sbjct: 4 EQLIEEAKKAWQRAYVPYSGFPVGAALLTEDGRVFSGCNVENASFGLTNCAERTAFFKAV 63
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDI 119
SEG KF+ +AV + ++ VSPCG+CRQV+ EF SP +
Sbjct: 64 SEGAVKFRALAV---VGATSGPVSPCGACRQVMVEFCSPGMKV 103
>gi|160903259|ref|YP_001568840.1| cytidine deaminase [Petrotoga mobilis SJ95]
gi|160360903|gb|ABX32517.1| cytidine deaminase [Petrotoga mobilis SJ95]
Length = 132
Score = 106 bits (264), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 51/98 (52%), Positives = 70/98 (71%), Gaps = 3/98 (3%)
Query: 15 IEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISK 74
I + L +++AR+NAY PYS +VGA LL D IF+GCNVENASYG++ICAE+ AI
Sbjct: 6 IVEKLYEEAMKARENAYAPYSNFKVGACLLSDDGEIFSGCNVENASYGLSICAERNAIFS 65
Query: 75 AISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEF 112
A+++G+ +FK + V A + V PCG+CRQV+AEF
Sbjct: 66 AVAKGKREFKAMLVVA---EGEAPVKPCGACRQVMAEF 100
>gi|289167737|ref|YP_003446006.1| cytidine deaminase [Streptococcus mitis B6]
gi|288907304|emb|CBJ22140.1| cytidine deaminase [Streptococcus mitis B6]
Length = 129
Score = 106 bits (264), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 53/116 (45%), Positives = 73/116 (62%), Gaps = 5/116 (4%)
Query: 18 NLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAIS 77
L L+I+ AY PYS VGA L+ +D +TG N+ENASY +T C E+TAI KA+S
Sbjct: 5 ELIELAIETSKKAYVPYSHFPVGAVLVAKDGNTYTGVNIENASYSLTNCGERTAIFKAVS 64
Query: 78 EGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQVGL 133
EGQ +F + V + K +SPCG+CRQV+AEF D++V +V D+S V +
Sbjct: 65 EGQREFSELIVYG---QTEKPISPCGACRQVMAEFFEQ--DLKVTLVAKDKSTVEM 115
>gi|228990930|ref|ZP_04150894.1| Cytidine deaminase [Bacillus pseudomycoides DSM 12442]
gi|228997005|ref|ZP_04156637.1| Cytidine deaminase [Bacillus mycoides Rock3-17]
gi|228762746|gb|EEM11661.1| Cytidine deaminase [Bacillus mycoides Rock3-17]
gi|228768867|gb|EEM17466.1| Cytidine deaminase [Bacillus pseudomycoides DSM 12442]
Length = 131
Score = 106 bits (264), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 50/104 (48%), Positives = 71/104 (68%), Gaps = 3/104 (2%)
Query: 28 DNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQTKFKRIA 87
+ AY PYSK VGAAL+ ++ I+TGCN+ENASYG+ CAE+TAI KA+SEG+ F +
Sbjct: 15 EKAYIPYSKFPVGAALVTKEGKIYTGCNIENASYGLCNCAERTAIFKAVSEGERDFSYLV 74
Query: 88 VSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQV 131
++ ++ +SPCG+CRQVIAEF P + + +K D +V
Sbjct: 75 ITG---KTDGPISPCGACRQVIAEFCDPKMPVLLTNLKGDEKEV 115
>gi|419766368|ref|ZP_14292573.1| cytidine deaminase [Streptococcus mitis SK579]
gi|383354189|gb|EID31764.1| cytidine deaminase [Streptococcus mitis SK579]
Length = 129
Score = 106 bits (264), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 54/116 (46%), Positives = 73/116 (62%), Gaps = 5/116 (4%)
Query: 18 NLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAIS 77
L L+I+ AY PYS V A L+ +D I+TG N+ENASY +T C E+TAI KAIS
Sbjct: 5 ELIELAIETSKKAYVPYSHFPVSAVLVAKDGKIYTGVNIENASYSLTNCGERTAIFKAIS 64
Query: 78 EGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQVGL 133
EGQ +F + V + K +SPCG+CRQV+AEF D++V +V D+S V +
Sbjct: 65 EGQREFSELIVYG---QTEKPISPCGACRQVMAEFFEQ--DLKVTLVAKDKSTVEM 115
>gi|148986072|ref|ZP_01819093.1| cytidine deaminase [Streptococcus pneumoniae SP3-BS71]
gi|148992510|ref|ZP_01822205.1| cytidine deaminase [Streptococcus pneumoniae SP9-BS68]
gi|149010528|ref|ZP_01831899.1| cytidine deaminase [Streptococcus pneumoniae SP19-BS75]
gi|149021708|ref|ZP_01835739.1| cytidine deaminase [Streptococcus pneumoniae SP23-BS72]
gi|168489783|ref|ZP_02713982.1| cytidine deaminase [Streptococcus pneumoniae SP195]
gi|182683756|ref|YP_001835503.1| cytidine deaminase [Streptococcus pneumoniae CGSP14]
gi|225858644|ref|YP_002740154.1| cytidine deaminase [Streptococcus pneumoniae 70585]
gi|303254020|ref|ZP_07340138.1| cytidine deaminase [Streptococcus pneumoniae BS455]
gi|303260305|ref|ZP_07346276.1| cytidine deaminase [Streptococcus pneumoniae SP-BS293]
gi|303261511|ref|ZP_07347459.1| cytidine deaminase [Streptococcus pneumoniae SP14-BS292]
gi|303264180|ref|ZP_07350101.1| cytidine deaminase [Streptococcus pneumoniae BS397]
gi|303267046|ref|ZP_07352918.1| cytidine deaminase [Streptococcus pneumoniae BS457]
gi|303269192|ref|ZP_07354969.1| cytidine deaminase [Streptococcus pneumoniae BS458]
gi|387757252|ref|YP_006064231.1| cytidine deaminase [Streptococcus pneumoniae OXC141]
gi|387759082|ref|YP_006066060.1| cytidine deaminase [Streptococcus pneumoniae INV200]
gi|410476283|ref|YP_006743042.1| cytidine deaminase [Streptococcus pneumoniae gamPNI0373]
gi|417678792|ref|ZP_12328189.1| cytidine deaminase [Streptococcus pneumoniae GA17570]
gi|418102555|ref|ZP_12739631.1| cytidine deaminase [Streptococcus pneumoniae NP070]
gi|418125450|ref|ZP_12762365.1| cytidine deaminase [Streptococcus pneumoniae GA44511]
gi|418139150|ref|ZP_12775981.1| cytidine deaminase [Streptococcus pneumoniae GA13338]
gi|418180262|ref|ZP_12816833.1| cytidine deaminase [Streptococcus pneumoniae GA41688]
gi|418191389|ref|ZP_12827893.1| cytidine deaminase [Streptococcus pneumoniae GA47388]
gi|418199961|ref|ZP_12836406.1| cytidine deaminase [Streptococcus pneumoniae GA47976]
gi|418214012|ref|ZP_12840747.1| cytidine deaminase [Streptococcus pneumoniae GA54644]
gi|418231904|ref|ZP_12858492.1| cytidine deaminase [Streptococcus pneumoniae GA07228]
gi|418234033|ref|ZP_12860613.1| cytidine deaminase [Streptococcus pneumoniae GA08780]
gi|418236347|ref|ZP_12862915.1| cytidine deaminase [Streptococcus pneumoniae GA19690]
gi|419475231|ref|ZP_14015072.1| cytidine deaminase [Streptococcus pneumoniae GA14688]
gi|419479668|ref|ZP_14019476.1| cytidine deaminase [Streptococcus pneumoniae GA19101]
gi|419484294|ref|ZP_14024070.1| cytidine deaminase [Streptococcus pneumoniae GA43257]
gi|419486386|ref|ZP_14026152.1| cytidine deaminase [Streptococcus pneumoniae GA44128]
gi|419499362|ref|ZP_14039061.1| cytidine deaminase [Streptococcus pneumoniae GA47597]
gi|419507905|ref|ZP_14047559.1| cytidine deaminase [Streptococcus pneumoniae GA49542]
gi|419514391|ref|ZP_14054019.1| cytidine deaminase [Streptococcus pneumoniae England14-9]
gi|419523171|ref|ZP_14062752.1| cytidine deaminase [Streptococcus pneumoniae GA13723]
gi|421206285|ref|ZP_15663348.1| cytidine deaminase [Streptococcus pneumoniae 2090008]
gi|421208663|ref|ZP_15665686.1| cytidine deaminase [Streptococcus pneumoniae 2070005]
gi|421217342|ref|ZP_15674243.1| cytidine deaminase [Streptococcus pneumoniae 2070335]
gi|421221145|ref|ZP_15677978.1| cytidine deaminase [Streptococcus pneumoniae 2070425]
gi|421222494|ref|ZP_15679285.1| cytidine deaminase [Streptococcus pneumoniae 2070531]
gi|421224700|ref|ZP_15681445.1| cytidine deaminase [Streptococcus pneumoniae 2070768]
gi|421229481|ref|ZP_15686156.1| cytidine deaminase [Streptococcus pneumoniae 2061376]
gi|421235993|ref|ZP_15692594.1| cytidine deaminase [Streptococcus pneumoniae 2071004]
gi|421278605|ref|ZP_15729415.1| cytidine deaminase [Streptococcus pneumoniae GA17301]
gi|421291712|ref|ZP_15742450.1| cytidine deaminase [Streptococcus pneumoniae GA56348]
gi|421293629|ref|ZP_15744353.1| cytidine deaminase [Streptococcus pneumoniae GA56113]
gi|421297439|ref|ZP_15748142.1| cytidine deaminase [Streptococcus pneumoniae GA58581]
gi|421300691|ref|ZP_15751362.1| cytidine deaminase [Streptococcus pneumoniae GA19998]
gi|421311583|ref|ZP_15762190.1| cytidine deaminase [Streptococcus pneumoniae GA58981]
gi|444388710|ref|ZP_21186685.1| cytidine deaminase [Streptococcus pneumoniae PCS125219]
gi|444390034|ref|ZP_21187949.1| cytidine deaminase [Streptococcus pneumoniae PCS70012]
gi|444393410|ref|ZP_21191060.1| cytidine deaminase [Streptococcus pneumoniae PCS81218]
gi|444394334|ref|ZP_21191887.1| cytidine deaminase [Streptococcus pneumoniae PNI0002]
gi|444397290|ref|ZP_21194773.1| cytidine deaminase [Streptococcus pneumoniae PNI0006]
gi|444400121|ref|ZP_21197541.1| cytidine deaminase [Streptococcus pneumoniae PNI0007]
gi|444402780|ref|ZP_21199932.1| cytidine deaminase [Streptococcus pneumoniae PNI0008]
gi|444405292|ref|ZP_21202204.1| cytidine deaminase [Streptococcus pneumoniae PNI0009]
gi|444407197|ref|ZP_21203864.1| cytidine deaminase [Streptococcus pneumoniae PNI0010]
gi|444410088|ref|ZP_21206640.1| cytidine deaminase [Streptococcus pneumoniae PNI0076]
gi|444411815|ref|ZP_21208141.1| cytidine deaminase [Streptococcus pneumoniae PNI0153]
gi|444415629|ref|ZP_21211861.1| cytidine deaminase [Streptococcus pneumoniae PNI0199]
gi|444418404|ref|ZP_21214386.1| cytidine deaminase [Streptococcus pneumoniae PNI0360]
gi|444420349|ref|ZP_21216143.1| cytidine deaminase [Streptococcus pneumoniae PNI0427]
gi|444423482|ref|ZP_21219085.1| cytidine deaminase [Streptococcus pneumoniae PNI0446]
gi|147765009|gb|EDK71938.1| cytidine deaminase [Streptococcus pneumoniae SP19-BS75]
gi|147921906|gb|EDK73032.1| cytidine deaminase [Streptococcus pneumoniae SP3-BS71]
gi|147928827|gb|EDK79840.1| cytidine deaminase [Streptococcus pneumoniae SP9-BS68]
gi|147930169|gb|EDK81155.1| cytidine deaminase [Streptococcus pneumoniae SP23-BS72]
gi|182629090|gb|ACB90038.1| cytidine deaminase [Streptococcus pneumoniae CGSP14]
gi|183571765|gb|EDT92293.1| cytidine deaminase [Streptococcus pneumoniae SP195]
gi|225721793|gb|ACO17647.1| cytidine deaminase [Streptococcus pneumoniae 70585]
gi|301799841|emb|CBW32413.1| cytidine deaminase [Streptococcus pneumoniae OXC141]
gi|301801671|emb|CBW34374.1| cytidine deaminase [Streptococcus pneumoniae INV200]
gi|302599000|gb|EFL66028.1| cytidine deaminase [Streptococcus pneumoniae BS455]
gi|302637645|gb|EFL68132.1| cytidine deaminase [Streptococcus pneumoniae SP14-BS292]
gi|302638629|gb|EFL69093.1| cytidine deaminase [Streptococcus pneumoniae SP-BS293]
gi|302641256|gb|EFL71626.1| cytidine deaminase [Streptococcus pneumoniae BS458]
gi|302643440|gb|EFL73715.1| cytidine deaminase [Streptococcus pneumoniae BS457]
gi|302646585|gb|EFL76811.1| cytidine deaminase [Streptococcus pneumoniae BS397]
gi|332073171|gb|EGI83650.1| cytidine deaminase [Streptococcus pneumoniae GA17570]
gi|353776721|gb|EHD57196.1| cytidine deaminase [Streptococcus pneumoniae NP070]
gi|353799194|gb|EHD79516.1| cytidine deaminase [Streptococcus pneumoniae GA44511]
gi|353845874|gb|EHE25912.1| cytidine deaminase [Streptococcus pneumoniae GA41688]
gi|353857290|gb|EHE37253.1| cytidine deaminase [Streptococcus pneumoniae GA47388]
gi|353865008|gb|EHE44917.1| cytidine deaminase [Streptococcus pneumoniae GA47976]
gi|353871295|gb|EHE51166.1| cytidine deaminase [Streptococcus pneumoniae GA54644]
gi|353888210|gb|EHE67986.1| cytidine deaminase [Streptococcus pneumoniae GA07228]
gi|353889472|gb|EHE69243.1| cytidine deaminase [Streptococcus pneumoniae GA08780]
gi|353892579|gb|EHE72327.1| cytidine deaminase [Streptococcus pneumoniae GA19690]
gi|353905987|gb|EHE81403.1| cytidine deaminase [Streptococcus pneumoniae GA13338]
gi|379558710|gb|EHZ23743.1| cytidine deaminase [Streptococcus pneumoniae GA13723]
gi|379561569|gb|EHZ26586.1| cytidine deaminase [Streptococcus pneumoniae GA14688]
gi|379573322|gb|EHZ38278.1| cytidine deaminase [Streptococcus pneumoniae GA19101]
gi|379583805|gb|EHZ48682.1| cytidine deaminase [Streptococcus pneumoniae GA43257]
gi|379588001|gb|EHZ52847.1| cytidine deaminase [Streptococcus pneumoniae GA44128]
gi|379602416|gb|EHZ67187.1| cytidine deaminase [Streptococcus pneumoniae GA47597]
gi|379612750|gb|EHZ77467.1| cytidine deaminase [Streptococcus pneumoniae GA49542]
gi|379638881|gb|EIA03426.1| cytidine deaminase [Streptococcus pneumoniae England14-9]
gi|395575823|gb|EJG36385.1| cytidine deaminase [Streptococcus pneumoniae 2070005]
gi|395577112|gb|EJG37662.1| cytidine deaminase [Streptococcus pneumoniae 2090008]
gi|395584828|gb|EJG45220.1| cytidine deaminase [Streptococcus pneumoniae 2070335]
gi|395585409|gb|EJG45793.1| cytidine deaminase [Streptococcus pneumoniae 2070425]
gi|395588662|gb|EJG48990.1| cytidine deaminase [Streptococcus pneumoniae 2070531]
gi|395591031|gb|EJG51330.1| cytidine deaminase [Streptococcus pneumoniae 2070768]
gi|395596815|gb|EJG57025.1| cytidine deaminase [Streptococcus pneumoniae 2061376]
gi|395604912|gb|EJG65044.1| cytidine deaminase [Streptococcus pneumoniae 2071004]
gi|395881977|gb|EJG93025.1| cytidine deaminase [Streptococcus pneumoniae GA17301]
gi|395893013|gb|EJH04003.1| cytidine deaminase [Streptococcus pneumoniae GA58581]
gi|395893929|gb|EJH04910.1| cytidine deaminase [Streptococcus pneumoniae GA56348]
gi|395894961|gb|EJH05937.1| cytidine deaminase [Streptococcus pneumoniae GA56113]
gi|395900115|gb|EJH11054.1| cytidine deaminase [Streptococcus pneumoniae GA19998]
gi|395912161|gb|EJH23024.1| cytidine deaminase [Streptococcus pneumoniae GA58981]
gi|406369228|gb|AFS42918.1| cytidine deaminase [Streptococcus pneumoniae gamPNI0373]
gi|429317681|emb|CCP37473.1| cytidine deaminase [Streptococcus pneumoniae SPN034156]
gi|429319223|emb|CCP32466.1| cytidine deaminase [Streptococcus pneumoniae SPN034183]
gi|429321038|emb|CCP34440.1| cytidine deaminase [Streptococcus pneumoniae SPN994039]
gi|429322858|emb|CCP30481.1| cytidine deaminase [Streptococcus pneumoniae SPN994038]
gi|444248462|gb|ELU54969.1| cytidine deaminase [Streptococcus pneumoniae PCS125219]
gi|444256497|gb|ELU62835.1| cytidine deaminase [Streptococcus pneumoniae PCS70012]
gi|444259612|gb|ELU65922.1| cytidine deaminase [Streptococcus pneumoniae PCS81218]
gi|444259947|gb|ELU66255.1| cytidine deaminase [Streptococcus pneumoniae PNI0006]
gi|444261401|gb|ELU67705.1| cytidine deaminase [Streptococcus pneumoniae PNI0002]
gi|444265935|gb|ELU71917.1| cytidine deaminase [Streptococcus pneumoniae PNI0008]
gi|444267258|gb|ELU73168.1| cytidine deaminase [Streptococcus pneumoniae PNI0007]
gi|444270793|gb|ELU76544.1| cytidine deaminase [Streptococcus pneumoniae PNI0010]
gi|444274312|gb|ELU79960.1| cytidine deaminase [Streptococcus pneumoniae PNI0009]
gi|444275147|gb|ELU80774.1| cytidine deaminase [Streptococcus pneumoniae PNI0153]
gi|444278227|gb|ELU83692.1| cytidine deaminase [Streptococcus pneumoniae PNI0076]
gi|444279393|gb|ELU84793.1| cytidine deaminase [Streptococcus pneumoniae PNI0199]
gi|444281555|gb|ELU86868.1| cytidine deaminase [Streptococcus pneumoniae PNI0360]
gi|444284901|gb|ELU90003.1| cytidine deaminase [Streptococcus pneumoniae PNI0427]
gi|444286842|gb|ELU91797.1| cytidine deaminase [Streptococcus pneumoniae PNI0446]
Length = 129
Score = 106 bits (264), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 52/115 (45%), Positives = 74/115 (64%), Gaps = 5/115 (4%)
Query: 19 LANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISE 78
L L+I+ +AY PYS +GA L+ +D ++TG N+ENASY +T C E+TAI KAISE
Sbjct: 6 LIELAIETSKHAYVPYSHFPIGAVLVAKDGNVYTGVNIENASYPLTNCGERTAIFKAISE 65
Query: 79 GQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQVGL 133
GQ +F + V + K +SPCG+CRQV+ EF D++V +V D+S V +
Sbjct: 66 GQREFSELIVYG---QTEKPISPCGACRQVMVEFFEQ--DLKVTLVAKDKSTVEM 115
>gi|421289481|ref|ZP_15740233.1| cytidine deaminase [Streptococcus pneumoniae GA54354]
gi|421304801|ref|ZP_15755457.1| cytidine deaminase [Streptococcus pneumoniae GA62331]
gi|395890741|gb|EJH01747.1| cytidine deaminase [Streptococcus pneumoniae GA54354]
gi|395905463|gb|EJH16368.1| cytidine deaminase [Streptococcus pneumoniae GA62331]
Length = 129
Score = 106 bits (264), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 52/116 (44%), Positives = 75/116 (64%), Gaps = 5/116 (4%)
Query: 18 NLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAIS 77
L L+I+ +AY PYS +GA L+ +D +++TG N+ENASY +T C E+TAI KAIS
Sbjct: 5 ELIELAIEISKHAYVPYSHFPIGAVLVAKDGSVYTGVNIENASYPLTNCGERTAIFKAIS 64
Query: 78 EGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQVGL 133
EGQ +F + V + K +SPCG+CRQV+ EF D++V +V D+S V +
Sbjct: 65 EGQREFSELIVYG---QTEKPISPCGACRQVMVEFFEQ--DLKVTLVAKDKSTVEM 115
>gi|352683078|ref|YP_004893602.1| Cytidine deaminase [Thermoproteus tenax Kra 1]
gi|350275877|emb|CCC82524.1| Cytidine deaminase [Thermoproteus tenax Kra 1]
Length = 130
Score = 106 bits (264), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 57/118 (48%), Positives = 76/118 (64%), Gaps = 6/118 (5%)
Query: 19 LANLSIQARD---NAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKA 75
+ +L +ARD NAY PYS +VGAA+L + I+TG NVENASYG+T+CAE+ A+ KA
Sbjct: 1 MEDLIAKARDALKNAYAPYSNFRVGAAVLTKSGRIYTGANVENASYGLTMCAERVAVFKA 60
Query: 76 ISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQVGL 133
++EG + I AI+ D+ + V PCG+CRQVIAEF+ A I S R V L
Sbjct: 61 VTEGD---RDIEAVAIVSDAGELVPPCGACRQVIAEFNPNALIIMATADGSKRLVVRL 115
>gi|239618084|ref|YP_002941406.1| cytidine deaminase [Kosmotoga olearia TBF 19.5.1]
gi|239506915|gb|ACR80402.1| cytidine deaminase [Kosmotoga olearia TBF 19.5.1]
Length = 132
Score = 106 bits (264), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 51/114 (44%), Positives = 76/114 (66%), Gaps = 7/114 (6%)
Query: 15 IEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISK 74
+E+ L ++ +A++ +Y PYS VGAALL +D IF G N+EN+S+G+TICAE++AI
Sbjct: 6 LEKKLIEMATKAKERSYSPYSNFAVGAALLTEDGEIFLGTNIENSSFGLTICAERSAIFS 65
Query: 75 AISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDR 128
A+S G+ KFK I AI+ + PCG+CRQV+AEF D V++V ++
Sbjct: 66 AVSSGKRKFKAI---AIIGSQDDPTPPCGACRQVMAEFG----DFDVILVGKEK 112
>gi|409048240|gb|EKM57718.1| hypothetical protein PHACADRAFT_251526 [Phanerochaete carnosa
HHB-10118-sp]
Length = 158
Score = 106 bits (264), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 57/114 (50%), Positives = 74/114 (64%), Gaps = 5/114 (4%)
Query: 14 PIEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAIS 73
P + + +IQA++ AY YSK +VGAALL D + GCNVENASYG TICAE+TA
Sbjct: 11 PDRERVIKAAIQAKEYAYSRYSKFRVGAALLSVDGQVIKGCNVENASYGGTICAERTAFV 70
Query: 74 KAISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSD 127
KA+SEG T F +AV++ D +SPCG CRQVI EF A + + +V +D
Sbjct: 71 KAVSEGVTSFTALAVTS---DVRAPLSPCGLCRQVIREFC--AQKMPIFLVPAD 119
>gi|342163512|ref|YP_004768151.1| cytidine deaminase [Streptococcus pseudopneumoniae IS7493]
gi|341933394|gb|AEL10291.1| cytidine deaminase [Streptococcus pseudopneumoniae IS7493]
Length = 129
Score = 106 bits (264), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 51/116 (43%), Positives = 75/116 (64%), Gaps = 5/116 (4%)
Query: 18 NLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAIS 77
L L+I+ +AY PYS +GA L+ +D +++TG N+ENASY +T C E+TAI KA+S
Sbjct: 5 ELIELAIETSKHAYVPYSHFPIGAVLVAKDGSVYTGVNIENASYPLTNCGERTAIFKAVS 64
Query: 78 EGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQVGL 133
EGQ +F + V + K +SPCG+CRQV+ EF D++V +V D+S V +
Sbjct: 65 EGQREFSELIVYG---QTEKPISPCGACRQVMVEFFEQ--DLKVTLVAKDKSTVEM 115
>gi|168484720|ref|ZP_02709672.1| cytidine deaminase [Streptococcus pneumoniae CDC1873-00]
gi|168490932|ref|ZP_02715075.1| cytidine deaminase [Streptococcus pneumoniae CDC0288-04]
gi|169834476|ref|YP_001694299.1| cytidine deaminase [Streptococcus pneumoniae Hungary19A-6]
gi|417312409|ref|ZP_12099123.1| cytidine deaminase [Streptococcus pneumoniae GA04375]
gi|417695998|ref|ZP_12345178.1| cytidine deaminase [Streptococcus pneumoniae GA47368]
gi|418091458|ref|ZP_12728602.1| cytidine deaminase [Streptococcus pneumoniae GA44452]
gi|418107223|ref|ZP_12744263.1| cytidine deaminase [Streptococcus pneumoniae GA41410]
gi|418109810|ref|ZP_12746837.1| cytidine deaminase [Streptococcus pneumoniae GA49447]
gi|418148266|ref|ZP_12785031.1| cytidine deaminase [Streptococcus pneumoniae GA13856]
gi|418161886|ref|ZP_12798576.1| cytidine deaminase [Streptococcus pneumoniae GA17328]
gi|418168933|ref|ZP_12805578.1| cytidine deaminase [Streptococcus pneumoniae GA19077]
gi|418175649|ref|ZP_12812246.1| cytidine deaminase [Streptococcus pneumoniae GA41437]
gi|418193473|ref|ZP_12829966.1| cytidine deaminase [Streptococcus pneumoniae GA47439]
gi|418218580|ref|ZP_12845248.1| cytidine deaminase [Streptococcus pneumoniae NP127]
gi|418220761|ref|ZP_12847417.1| cytidine deaminase [Streptococcus pneumoniae GA47751]
gi|418227427|ref|ZP_12854046.1| cytidine deaminase [Streptococcus pneumoniae 3063-00]
gi|418238413|ref|ZP_12864969.1| cytidine deaminase [Streptococcus pneumoniae NorthCarolina6A-23]
gi|419422034|ref|ZP_13962253.1| cytidine deaminase [Streptococcus pneumoniae GA43264]
gi|419437792|ref|ZP_13977864.1| cytidine deaminase [Streptococcus pneumoniae GA13499]
gi|419459685|ref|ZP_13999619.1| cytidine deaminase [Streptococcus pneumoniae GA02270]
gi|419461969|ref|ZP_14001884.1| cytidine deaminase [Streptococcus pneumoniae GA02714]
gi|419488702|ref|ZP_14028454.1| cytidine deaminase [Streptococcus pneumoniae GA44386]
gi|419492985|ref|ZP_14032712.1| cytidine deaminase [Streptococcus pneumoniae GA47210]
gi|421272487|ref|ZP_15723333.1| cytidine deaminase [Streptococcus pneumoniae SPAR55]
gi|168996978|gb|ACA37590.1| cytidine deaminase [Streptococcus pneumoniae Hungary19A-6]
gi|172042105|gb|EDT50151.1| cytidine deaminase [Streptococcus pneumoniae CDC1873-00]
gi|183574647|gb|EDT95175.1| cytidine deaminase [Streptococcus pneumoniae CDC0288-04]
gi|327390195|gb|EGE88538.1| cytidine deaminase [Streptococcus pneumoniae GA04375]
gi|332203995|gb|EGJ18062.1| cytidine deaminase [Streptococcus pneumoniae GA47368]
gi|353765362|gb|EHD45906.1| cytidine deaminase [Streptococcus pneumoniae GA44452]
gi|353780700|gb|EHD61157.1| cytidine deaminase [Streptococcus pneumoniae GA41410]
gi|353783769|gb|EHD64195.1| cytidine deaminase [Streptococcus pneumoniae GA49447]
gi|353812941|gb|EHD93174.1| cytidine deaminase [Streptococcus pneumoniae GA13856]
gi|353829383|gb|EHE09515.1| cytidine deaminase [Streptococcus pneumoniae GA17328]
gi|353835770|gb|EHE15863.1| cytidine deaminase [Streptococcus pneumoniae GA19077]
gi|353842217|gb|EHE22264.1| cytidine deaminase [Streptococcus pneumoniae GA41437]
gi|353860196|gb|EHE40143.1| cytidine deaminase [Streptococcus pneumoniae GA47439]
gi|353876777|gb|EHE56626.1| cytidine deaminase [Streptococcus pneumoniae NP127]
gi|353877630|gb|EHE57473.1| cytidine deaminase [Streptococcus pneumoniae GA47751]
gi|353883028|gb|EHE62837.1| cytidine deaminase [Streptococcus pneumoniae 3063-00]
gi|353894836|gb|EHE74577.1| cytidine deaminase [Streptococcus pneumoniae NorthCarolina6A-23]
gi|379533127|gb|EHY98348.1| cytidine deaminase [Streptococcus pneumoniae GA02270]
gi|379533277|gb|EHY98491.1| cytidine deaminase [Streptococcus pneumoniae GA02714]
gi|379540246|gb|EHZ05420.1| cytidine deaminase [Streptococcus pneumoniae GA13499]
gi|379588346|gb|EHZ53188.1| cytidine deaminase [Streptococcus pneumoniae GA44386]
gi|379589365|gb|EHZ54204.1| cytidine deaminase [Streptococcus pneumoniae GA43264]
gi|379595023|gb|EHZ59832.1| cytidine deaminase [Streptococcus pneumoniae GA47210]
gi|395876732|gb|EJG87805.1| cytidine deaminase [Streptococcus pneumoniae SPAR55]
Length = 129
Score = 106 bits (264), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 51/116 (43%), Positives = 75/116 (64%), Gaps = 5/116 (4%)
Query: 18 NLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAIS 77
L L+I+ +AY PYS +GA L+ +D +++TG N+ENASY +T C E+TA+ KAIS
Sbjct: 5 ELIELAIETSKHAYVPYSHFPIGAVLVAKDGSVYTGVNIENASYPLTNCGERTAVFKAIS 64
Query: 78 EGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQVGL 133
EGQ +F + V + K +SPCG+CRQV+ EF D++V +V D+S V +
Sbjct: 65 EGQREFSELIVYG---QTEKPISPCGACRQVMVEFFEQ--DLKVTLVAKDKSTVEM 115
>gi|167765539|ref|ZP_02437603.1| hypothetical protein CLOSS21_00033 [Clostridium sp. SS2/1]
gi|167712724|gb|EDS23303.1| cytidine deaminase [Clostridium sp. SS2/1]
Length = 125
Score = 106 bits (264), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 53/112 (47%), Positives = 76/112 (67%), Gaps = 4/112 (3%)
Query: 16 EQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKA 75
+Q L +L+ +A++ AY PYS+ QVGAA+L ++ +FTGCNVEN+SYG ICAE+TA KA
Sbjct: 3 DQELLDLADKAKEKAYAPYSRFQVGAAILTKEGKVFTGCNVENSSYGAAICAERTAAVKA 62
Query: 76 ISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSD 127
+SEG F+ IA+++ D V PCG CRQ + EF+ D++V+ D
Sbjct: 63 VSEGYHDFEMIAIASNGGDKET-VYPCGICRQFLHEFNP---DLKVICQSPD 110
>gi|253682034|ref|ZP_04862831.1| cytidine deaminase [Clostridium botulinum D str. 1873]
gi|416355420|ref|ZP_11681830.1| cytidine deaminase [Clostridium botulinum C str. Stockholm]
gi|253561746|gb|EES91198.1| cytidine deaminase [Clostridium botulinum D str. 1873]
gi|338195207|gb|EGO87520.1| cytidine deaminase [Clostridium botulinum C str. Stockholm]
Length = 132
Score = 106 bits (264), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 53/115 (46%), Positives = 75/115 (65%), Gaps = 4/115 (3%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
+ L +++ R+N+Y PYS +VGAA++ D I+ GCN+ENASYG T CAE+TAI A+
Sbjct: 4 KQLIKEALKYRENSYSPYSNFKVGAAVIMDDGKIYGGCNIENASYGATNCAERTAIFSAV 63
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQV 131
++G K K I A++ D + +PCG CRQVI+EFS DI +LI D +V
Sbjct: 64 AQGNKKLKAI---ALVGDLTTYTTPCGICRQVISEFSDENTDI-ILIKDEDDYKV 114
>gi|418078333|ref|ZP_12715556.1| cytidine deaminase [Streptococcus pneumoniae 4027-06]
gi|353747524|gb|EHD28180.1| cytidine deaminase [Streptococcus pneumoniae 4027-06]
Length = 129
Score = 106 bits (264), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 52/116 (44%), Positives = 75/116 (64%), Gaps = 5/116 (4%)
Query: 18 NLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAIS 77
L L+I+ +AY PYS +GA L+ +D +++TG N+ENASY +T C E+ AI KAIS
Sbjct: 5 ELIELAIETSKHAYVPYSHFPIGAVLVAKDGSVYTGVNIENASYPLTNCGERIAIFKAIS 64
Query: 78 EGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQVGL 133
EGQ +F + V + K +SPCG+CRQV+AEF D++V +V D+S V +
Sbjct: 65 EGQREFSELIVYG---QTEKPISPCGACRQVMAEFFEQ--DLKVTLVAKDKSTVEM 115
>gi|260892063|ref|YP_003238160.1| cytidine deaminase [Ammonifex degensii KC4]
gi|260864204|gb|ACX51310.1| cytidine deaminase [Ammonifex degensii KC4]
Length = 126
Score = 106 bits (264), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 49/104 (47%), Positives = 75/104 (72%), Gaps = 4/104 (3%)
Query: 16 EQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKA 75
+++L L+++A++ AY PYS ++VGAALL ++ +FTG NVENASYG+T+CAE+ A KA
Sbjct: 3 DEDLVRLALEAKERAYAPYSGIKVGAALLTREGKVFTGANVENASYGLTLCAERVAAVKA 62
Query: 76 ISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDI 119
+SEG ++ +AV+ + F PCG+CRQV+ EF +PA +
Sbjct: 63 VSEGMKEWLVLAVAW---NREDFCRPCGACRQVLFEF-APALRV 102
>gi|331269999|ref|YP_004396491.1| cytidine deaminase [Clostridium botulinum BKT015925]
gi|329126549|gb|AEB76494.1| cytidine deaminase [Clostridium botulinum BKT015925]
Length = 132
Score = 106 bits (264), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 52/111 (46%), Positives = 73/111 (65%), Gaps = 3/111 (2%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
+ L +++ R+NAY PYS +VGAA++ D I+ GCN+ENASYG T CAE+TAI A+
Sbjct: 4 KQLIKEALKYRENAYSPYSNFKVGAAVIMDDGKIYGGCNIENASYGATNCAERTAIFSAV 63
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSD 127
++G K K I A++ D + +PCG CRQVI+EFS DI ++ K D
Sbjct: 64 AQGNKKLKAI---ALVGDLATYTTPCGICRQVISEFSDENTDIILVKNKDD 111
>gi|229084875|ref|ZP_04217129.1| Cytidine deaminase [Bacillus cereus Rock3-44]
gi|228698410|gb|EEL51141.1| Cytidine deaminase [Bacillus cereus Rock3-44]
Length = 131
Score = 106 bits (264), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 50/104 (48%), Positives = 70/104 (67%), Gaps = 3/104 (2%)
Query: 28 DNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQTKFKRIA 87
D AY PYSK VGAAL+ + ++TGCN+ENASYG+ CAE+TAI KA+SEG+ F +
Sbjct: 15 DKAYIPYSKFPVGAALVTKGGKVYTGCNIENASYGLCNCAERTAIFKAVSEGERDFSYLV 74
Query: 88 VSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQV 131
++ ++ +SPCG+CRQVIAEF P + + +K D +V
Sbjct: 75 ITG---KTDGPISPCGACRQVIAEFCDPKMPVLLTNLKGDEKEV 115
>gi|218961795|ref|YP_001741570.1| Cytidine deaminase [Candidatus Cloacamonas acidaminovorans]
gi|167730452|emb|CAO81364.1| Cytidine deaminase [Candidatus Cloacamonas acidaminovorans str.
Evry]
Length = 133
Score = 106 bits (264), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 57/124 (45%), Positives = 75/124 (60%), Gaps = 6/124 (4%)
Query: 12 LDPIEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTA 71
L+ E+ L + +A +N+Y PYS +VG A+ +D IFTGCNVENASY +TICAE+ A
Sbjct: 4 LNLSEKELLEAAKKAAENSYSPYSHYKVGCAVKTKDGHIFTGCNVENASYSLTICAERNA 63
Query: 72 ISKAISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQV 131
I KAISEG F +AV DS + PCG+CRQVI EF A +I+++
Sbjct: 64 IFKAISEGHRTFSEMAVYV---DSEESFPPCGACRQVIYEF---APEIEIIYANRKAIHK 117
Query: 132 GLIT 135
IT
Sbjct: 118 AFIT 121
>gi|386585991|ref|YP_006082393.1| Cytidine deaminase [Streptococcus suis D12]
gi|389856518|ref|YP_006358761.1| Cytidine deaminase [Streptococcus suis ST1]
gi|403061587|ref|YP_006649803.1| cytidine deaminase [Streptococcus suis S735]
gi|417090468|ref|ZP_11955965.1| Cytidine deaminase [Streptococcus suis R61]
gi|353533603|gb|EHC03253.1| Cytidine deaminase [Streptococcus suis R61]
gi|353738137|gb|AER19145.1| Cytidine deaminase [Streptococcus suis D12]
gi|353740236|gb|AER21243.1| Cytidine deaminase [Streptococcus suis ST1]
gi|402808913|gb|AFR00405.1| cytidine deaminase [Streptococcus suis S735]
Length = 129
Score = 106 bits (264), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 55/116 (47%), Positives = 75/116 (64%), Gaps = 5/116 (4%)
Query: 18 NLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAIS 77
+L L+++ AY PYSK V A L+ + IFTG N+ENAS+G+T CAE+TAI KAIS
Sbjct: 5 DLIELAVKNSQKAYVPYSKFPVSAVLVAKTGEIFTGVNIENASFGLTNCAERTAIFKAIS 64
Query: 78 EGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQVGL 133
EG F I I ++ K +SPCG+CRQV+AEF D++V +V D+S V +
Sbjct: 65 EGVKDFSEI---IIYGETEKPISPCGACRQVMAEFFDK--DLKVTLVAKDKSTVEM 115
>gi|293365624|ref|ZP_06612333.1| cytidine deaminase [Streptococcus oralis ATCC 35037]
gi|315613339|ref|ZP_07888248.1| cytidine deaminase [Streptococcus sanguinis ATCC 49296]
gi|322375413|ref|ZP_08049926.1| cytidine deaminase [Streptococcus sp. C300]
gi|419779322|ref|ZP_14305198.1| cytidine deaminase [Streptococcus oralis SK10]
gi|419780883|ref|ZP_14306720.1| cytidine deaminase [Streptococcus oralis SK100]
gi|291315992|gb|EFE56436.1| cytidine deaminase [Streptococcus oralis ATCC 35037]
gi|315314574|gb|EFU62617.1| cytidine deaminase [Streptococcus sanguinis ATCC 49296]
gi|321279676|gb|EFX56716.1| cytidine deaminase [Streptococcus sp. C300]
gi|383184775|gb|EIC77284.1| cytidine deaminase [Streptococcus oralis SK100]
gi|383186350|gb|EIC78820.1| cytidine deaminase [Streptococcus oralis SK10]
Length = 129
Score = 106 bits (264), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 52/116 (44%), Positives = 74/116 (63%), Gaps = 5/116 (4%)
Query: 18 NLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAIS 77
L L+I+ AY PYS +GA L+ +D +I+TG N+ENASY +T C E+TAI KA+S
Sbjct: 5 ELIELAIETSKQAYVPYSHFPIGAVLVAKDGSIYTGVNIENASYPLTNCGERTAIFKAVS 64
Query: 78 EGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQVGL 133
EGQ +F + V + K +SPCG+CRQV+ EF D++V +V D+S V +
Sbjct: 65 EGQREFSELIVYG---QTEKPISPCGACRQVMVEFFEQ--DLKVTLVAKDKSTVEM 115
>gi|399889915|ref|ZP_10775792.1| cytidine deaminase [Clostridium arbusti SL206]
Length = 131
Score = 106 bits (264), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 52/103 (50%), Positives = 70/103 (67%), Gaps = 3/103 (2%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
+NL +++ R+ AY PYSK +VGA+++ D I++GCN+ENASYG T CAE+TAI K I
Sbjct: 4 KNLIIKALEYRERAYAPYSKFKVGASVIMDDGKIYSGCNIENASYGATNCAERTAIFKGI 63
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDI 119
SEG K I AI+ +++ + PCG CRQVI EFS DI
Sbjct: 64 SEGGKSIKAI---AIVGNNSMYTYPCGICRQVIEEFSDENTDI 103
>gi|419782425|ref|ZP_14308234.1| cytidine deaminase [Streptococcus oralis SK610]
gi|383183529|gb|EIC76066.1| cytidine deaminase [Streptococcus oralis SK610]
Length = 129
Score = 106 bits (264), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 52/116 (44%), Positives = 74/116 (63%), Gaps = 5/116 (4%)
Query: 18 NLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAIS 77
L L+I+ AY PYS +GA L+ +D +I+TG N+ENASY +T C E+TAI KA+S
Sbjct: 5 ELIELAIETSKKAYVPYSHFPIGAVLVAKDGSIYTGVNIENASYPLTNCGERTAIFKAVS 64
Query: 78 EGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQVGL 133
EGQ +F + V + K +SPCG+CRQV+ EF D++V +V D+S V +
Sbjct: 65 EGQREFSELIVYG---QTEKPISPCGACRQVMVEFFEQ--DLKVTLVAKDKSTVEM 115
>gi|225870434|ref|YP_002746381.1| cytidine deaminase [Streptococcus equi subsp. equi 4047]
gi|225699838|emb|CAW93686.1| cytidine deaminase [Streptococcus equi subsp. equi 4047]
Length = 129
Score = 106 bits (264), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 53/112 (47%), Positives = 75/112 (66%), Gaps = 4/112 (3%)
Query: 18 NLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAIS 77
+L +L+I+A AY PYS +GAAL +D TI+TG N+ENAS+G+T C E+TAI KA+S
Sbjct: 5 DLVSLAIEASKRAYVPYSHFPIGAALKTKDGTIYTGNNIENASFGLTNCGERTAIFKAVS 64
Query: 78 EGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRS 129
EG + I AI ++++ +SPCG+CRQV+AEF + LI K R+
Sbjct: 65 EGHQQLLEI---AIYGETDEPISPCGACRQVMAEFFEATAPV-TLIAKDGRT 112
>gi|400290348|ref|ZP_10792375.1| cytidine deaminase [Streptococcus ratti FA-1 = DSM 20564]
gi|399921139|gb|EJN93956.1| cytidine deaminase [Streptococcus ratti FA-1 = DSM 20564]
Length = 128
Score = 105 bits (263), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 55/120 (45%), Positives = 77/120 (64%), Gaps = 6/120 (5%)
Query: 18 NLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAIS 77
+L +L+ +A NAY PYS +GAA+ + I+ GCN+ENAS+G+T C E+TAI KAIS
Sbjct: 4 DLISLAQKASQNAYVPYSHFPIGAAVKTKSGDIYLGCNIENASFGLTNCGERTAIFKAIS 63
Query: 78 EGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQVGLITID 137
EG F+ IAV D +SPCG+CRQV+AEF P + L+ K ++ V +T+D
Sbjct: 64 EGHRDFEEIAVYGETEDP---ISPCGACRQVMAEFFEPTARV-TLVAKDGKTVV--MTVD 117
>gi|327311470|ref|YP_004338367.1| cytidine deaminase [Thermoproteus uzoniensis 768-20]
gi|326947949|gb|AEA13055.1| cytidine deaminase [Thermoproteus uzoniensis 768-20]
Length = 130
Score = 105 bits (263), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 54/115 (46%), Positives = 79/115 (68%), Gaps = 6/115 (5%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
+ L + +A NAY PYSK +VGAA+L + I+TG NVENASYG+T+CAE+ A+ KA+
Sbjct: 2 EELVEKAREALKNAYAPYSKFRVGAAVLTKSGKIYTGVNVENASYGLTVCAERVAVFKAV 61
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQV 131
SEG + I A++ DS++ +PCG+CRQVIAEF+ D V++ +D+ +V
Sbjct: 62 SEGD---RDIVAVAVVVDSDEPAAPCGACRQVIAEFNP---DALVIMATADKRKV 110
>gi|196041226|ref|ZP_03108521.1| cytidine deaminase [Bacillus cereus NVH0597-99]
gi|196027934|gb|EDX66546.1| cytidine deaminase [Bacillus cereus NVH0597-99]
Length = 131
Score = 105 bits (263), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 50/103 (48%), Positives = 70/103 (67%), Gaps = 3/103 (2%)
Query: 29 NAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQTKFKRIAV 88
AY PYSK VGA L+ ++ I+TGCN+ENASYG+ CAE+TAI KA+SEG+ F + +
Sbjct: 16 KAYIPYSKFPVGATLVTKEGKIYTGCNIENASYGLCNCAERTAIFKAVSEGERDFSYLVI 75
Query: 89 SAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQV 131
+ +++ +SPCG+CRQVIAEF P + + VK D +V
Sbjct: 76 TG---ETDGPISPCGACRQVIAEFCDPKMPVLLTNVKGDEKEV 115
>gi|403237534|ref|ZP_10916120.1| cytidine deaminase [Bacillus sp. 10403023]
Length = 134
Score = 105 bits (263), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 56/123 (45%), Positives = 81/123 (65%), Gaps = 6/123 (4%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
+ L + + +AR+ AY PYSK +VGAA+L +D ++ GCN+ENA+Y +T CAE+TA+ KA+
Sbjct: 4 EELIDEAKKARELAYVPYSKFKVGAAILTKDGKVYHGCNIENAAYSVTNCAERTALFKAV 63
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQVGLITI 136
SEG +F IAV A D+ + V PCG+CRQVI+E + + +K D V ITI
Sbjct: 64 SEGDKEFAAIAVVA---DTERPVPPCGACRQVISELCGRDTKVYLSNLKGD---VQEITI 117
Query: 137 DGM 139
D +
Sbjct: 118 DEL 120
>gi|423563774|ref|ZP_17540050.1| cytidine deaminase [Bacillus cereus MSX-A1]
gi|401198268|gb|EJR05188.1| cytidine deaminase [Bacillus cereus MSX-A1]
Length = 131
Score = 105 bits (263), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 50/103 (48%), Positives = 70/103 (67%), Gaps = 3/103 (2%)
Query: 29 NAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQTKFKRIAV 88
AY PYSK VGAAL+ ++ I+TGCN+ENASYG+ CAE+TAI KA+SEG+ F + +
Sbjct: 16 KAYIPYSKFPVGAALVTKEGKIYTGCNIENASYGLCNCAERTAIFKAVSEGERDFSYLVI 75
Query: 89 SAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQV 131
+ +++ +SPCG+CRQVI EF P + + VK D +V
Sbjct: 76 TG---ETDGPISPCGACRQVIVEFCDPKMPVLLTNVKGDEKEV 115
>gi|312866044|ref|ZP_07726265.1| cytidine deaminase [Streptococcus downei F0415]
gi|311098448|gb|EFQ56671.1| cytidine deaminase [Streptococcus downei F0415]
Length = 139
Score = 105 bits (263), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 57/108 (52%), Positives = 71/108 (65%), Gaps = 4/108 (3%)
Query: 18 NLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAIS 77
+L L+ QA AY PYS VGAALL + IF GCN+ENAS G+T CAE+TAI KAIS
Sbjct: 7 DLVQLAKQASQRAYVPYSGFPVGAALLTRSGQIFEGCNIENASLGLTNCAERTAIFKAIS 66
Query: 78 EGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVK 125
EG F + AI +++ +SPCG+CRQV+AEF AC + LI K
Sbjct: 67 EGYRDFAGL---AIYGQTDRPISPCGACRQVMAEFFDLACPV-TLIAK 110
>gi|118444585|ref|YP_878553.1| cytidine deaminase [Clostridium novyi NT]
gi|118135041|gb|ABK62085.1| cytidine deaminase [Clostridium novyi NT]
Length = 132
Score = 105 bits (263), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 51/111 (45%), Positives = 75/111 (67%), Gaps = 3/111 (2%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
+ L +++ R+ AY PYSK +VGAA++ D I+ GCN+ENASYG T CAE+TAI A+
Sbjct: 4 KELIKEALKYRETAYSPYSKFKVGAAVIMDDGKIYGGCNIENASYGATNCAERTAIFSAV 63
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSD 127
++G K K I A++ D + + +PCG CRQVI+EFS DI ++ ++D
Sbjct: 64 AQGNKKLKAI---ALVGDLSTYTTPCGICRQVISEFSDENTDIILIKNEND 111
>gi|307709020|ref|ZP_07645480.1| cytidine deaminase [Streptococcus mitis SK564]
gi|307620356|gb|EFN99472.1| cytidine deaminase [Streptococcus mitis SK564]
Length = 129
Score = 105 bits (263), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 51/116 (43%), Positives = 74/116 (63%), Gaps = 5/116 (4%)
Query: 18 NLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAIS 77
L L+I+ +AY PYS +GA L+ +D +++TG N+ENASY +T C E+TAI KA+S
Sbjct: 5 ELIELAIETSKHAYVPYSHFPIGAVLVAKDGSVYTGVNIENASYSLTNCGERTAIFKAVS 64
Query: 78 EGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQVGL 133
EGQ F + V + K +SPCG+CRQV+ EF D++V +V D+S V +
Sbjct: 65 EGQRDFSELIVYG---QTEKPISPCGACRQVMVEFFEQ--DLKVTLVAKDKSTVEM 115
>gi|146318738|ref|YP_001198450.1| cytidine deaminase [Streptococcus suis 05ZYH33]
gi|146320942|ref|YP_001200653.1| cytidine deaminase [Streptococcus suis 98HAH33]
gi|145689544|gb|ABP90050.1| Cytidine deaminase [Streptococcus suis 05ZYH33]
gi|145691748|gb|ABP92253.1| Cytidine deaminase [Streptococcus suis 98HAH33]
Length = 134
Score = 105 bits (263), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 58/125 (46%), Positives = 78/125 (62%), Gaps = 7/125 (5%)
Query: 7 MEFSALDPIEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTIC 66
ME ++ I +L L+++ AY PYSK V A L+ + IFTG N+ENAS+G+T C
Sbjct: 1 MEHRRMETI--DLIELAVKNSQKAYVPYSKFPVSAVLVAKTGEIFTGVNIENASFGLTNC 58
Query: 67 AEKTAISKAISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKS 126
AE+TAI KAISEG F I I + K +SPCG+CRQV+AEF D++V +V
Sbjct: 59 AERTAIFKAISEGVKDFSEI---IIYGKTEKPISPCGACRQVMAEFFDK--DLKVTLVAK 113
Query: 127 DRSQV 131
D+S V
Sbjct: 114 DKSTV 118
>gi|398817962|ref|ZP_10576561.1| cytidine deaminase, homotetrameric [Brevibacillus sp. BC25]
gi|398028760|gb|EJL22263.1| cytidine deaminase, homotetrameric [Brevibacillus sp. BC25]
Length = 132
Score = 105 bits (263), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 54/112 (48%), Positives = 76/112 (67%), Gaps = 3/112 (2%)
Query: 16 EQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKA 75
+Q+L +I+AR+ AY PYSK QVGAALL + ++ G N+ENA+Y + CAE+TA+ KA
Sbjct: 3 KQSLLAQAIEARELAYVPYSKFQVGAALLAESGKVYLGGNIENAAYSLCNCAERTALFKA 62
Query: 76 ISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSD 127
SEG +K +AV+A D+ + VSPCG+CRQVIAE P + + +K D
Sbjct: 63 YSEGDRTYKALAVAA---DTPQAVSPCGACRQVIAELCPPDMPVFLTNLKGD 111
>gi|388580179|gb|EIM20496.1| cytidine deaminase [Wallemia sebi CBS 633.66]
Length = 150
Score = 105 bits (263), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 52/104 (50%), Positives = 70/104 (67%), Gaps = 3/104 (2%)
Query: 16 EQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKA 75
E L + + QA +Y PYSK +VGAAL+ ++ IF G NVENASYG ICAE+TA+ KA
Sbjct: 8 EPELISRAFQALQRSYSPYSKFRVGAALVSTENEIFGGANVENASYGGAICAERTALVKA 67
Query: 76 ISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDI 119
+SEG +F+ +AV + D ++ ++PCG CRQ I EF SP I
Sbjct: 68 VSEGHKRFQALAV---VSDLDEPITPCGICRQFIREFFSPETPI 108
>gi|384134472|ref|YP_005517186.1| pyrimidine-nucleoside phosphorylase [Alicyclobacillus
acidocaldarius subsp. acidocaldarius Tc-4-1]
gi|339288557|gb|AEJ42667.1| pyrimidine-nucleoside phosphorylase [Alicyclobacillus
acidocaldarius subsp. acidocaldarius Tc-4-1]
Length = 595
Score = 105 bits (262), Expect = 6e-21, Method: Composition-based stats.
Identities = 52/99 (52%), Positives = 69/99 (69%), Gaps = 1/99 (1%)
Query: 18 NLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAIS 77
+L + + +ARD AY PYS VGAAL D + TG NVENASYG+T CAE++A+ +A++
Sbjct: 456 DLMDAAREARDRAYVPYSGFAVGAALELADGRMVTGANVENASYGLTNCAERSAVFRAVA 515
Query: 78 EGQTKFK-RIAVSAILPDSNKFVSPCGSCRQVIAEFSSP 115
EG K I A++ DS + VSPCG+CRQV+AEF SP
Sbjct: 516 EGGPGTKPEIRAVAVIADSPEPVSPCGACRQVLAEFCSP 554
>gi|223932346|ref|ZP_03624349.1| cytidine deaminase [Streptococcus suis 89/1591]
gi|302023862|ref|ZP_07249073.1| cytidine deaminase [Streptococcus suis 05HAS68]
gi|330832904|ref|YP_004401729.1| cytidine deaminase [Streptococcus suis ST3]
gi|386584294|ref|YP_006080697.1| cytidine deaminase [Streptococcus suis D9]
gi|223899027|gb|EEF65385.1| cytidine deaminase [Streptococcus suis 89/1591]
gi|329307127|gb|AEB81543.1| cytidine deaminase [Streptococcus suis ST3]
gi|353736440|gb|AER17449.1| cytidine deaminase [Streptococcus suis D9]
Length = 129
Score = 105 bits (262), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 55/114 (48%), Positives = 73/114 (64%), Gaps = 5/114 (4%)
Query: 18 NLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAIS 77
+L L+++ AY PYSK V A L+ + IFTG N+ENAS+G+T CAE+TAI KAIS
Sbjct: 5 DLIELAVKNSQKAYVPYSKFPVSAVLVAETGEIFTGVNIENASFGLTNCAERTAIFKAIS 64
Query: 78 EGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQV 131
EG F I I + K +SPCG+CRQV+AEF D++V +V D+S V
Sbjct: 65 EGVKDFSEI---VIYGKTEKPISPCGACRQVMAEFFDK--DLKVTLVAKDKSTV 113
>gi|401683528|ref|ZP_10815414.1| cytidine deaminase [Streptococcus sp. BS35b]
gi|417941067|ref|ZP_12584354.1| cytidine deaminase [Streptococcus oralis SK313]
gi|418975736|ref|ZP_13523634.1| cytidine deaminase [Streptococcus oralis SK1074]
gi|343388360|gb|EGV00946.1| cytidine deaminase [Streptococcus oralis SK313]
gi|383347182|gb|EID25183.1| cytidine deaminase [Streptococcus oralis SK1074]
gi|400187606|gb|EJO21800.1| cytidine deaminase [Streptococcus sp. BS35b]
Length = 129
Score = 105 bits (262), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 52/115 (45%), Positives = 74/115 (64%), Gaps = 5/115 (4%)
Query: 19 LANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISE 78
L +L+I+ AY PYS V A L+ +D ++TG N+ENASY +T C E+TAI KA+SE
Sbjct: 6 LIDLAIETSKQAYVPYSHFPVSAVLVAKDGNVYTGVNIENASYSLTNCGERTAIFKAVSE 65
Query: 79 GQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQVGL 133
GQ +F + V + K +SPCG+CRQV+AEF D++V +V D+S V +
Sbjct: 66 GQREFSELIVYG---QTEKPISPCGACRQVMAEFFEK--DLKVTLVAKDKSTVEM 115
>gi|374320525|ref|YP_005073654.1| cytidine deaminase [Paenibacillus terrae HPL-003]
gi|357199534|gb|AET57431.1| cytidine deaminase [Paenibacillus terrae HPL-003]
Length = 131
Score = 105 bits (262), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 54/99 (54%), Positives = 69/99 (69%), Gaps = 3/99 (3%)
Query: 15 IEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISK 74
++ L +++AR AY PYS QVGAA+L D TI+ GCNVENASYG+ CAE+TAI K
Sbjct: 1 MKDQLIQEALEARKQAYIPYSNFQVGAAVLGSDGTIYRGCNVENASYGLCNCAERTAIFK 60
Query: 75 AISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFS 113
+SEG K I AI+ D+ VSPCG+CRQVI+EF+
Sbjct: 61 MVSEGCRKIDAI---AIVADTEGPVSPCGACRQVISEFA 96
>gi|325567399|ref|ZP_08144066.1| cytidine deaminase [Enterococcus casseliflavus ATCC 12755]
gi|325158832|gb|EGC70978.1| cytidine deaminase [Enterococcus casseliflavus ATCC 12755]
Length = 132
Score = 105 bits (262), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 52/124 (41%), Positives = 81/124 (65%), Gaps = 6/124 (4%)
Query: 16 EQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKA 75
++ + ++ A D AY PYSK VGA L+ ++ TI+ G N+ENASYG+ CAE+TA KA
Sbjct: 5 KKEWIDTAVSALDKAYVPYSKFPVGACLVAKNGTIYQGINIENASYGLINCAERTAFFKA 64
Query: 76 ISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQVGLIT 135
+SEG+ +F+ + V+ P+ +SPCG+CRQV+ EF +P D+ V +V D + T
Sbjct: 65 VSEGEKEFQHLVVAGHTPEP---ISPCGACRQVMVEFCAP--DMPVTLV-GDDGVIKETT 118
Query: 136 IDGM 139
++G+
Sbjct: 119 VEGL 122
>gi|150390777|ref|YP_001320826.1| cytidine deaminase [Alkaliphilus metalliredigens QYMF]
gi|149950639|gb|ABR49167.1| cytidine deaminase [Alkaliphilus metalliredigens QYMF]
Length = 133
Score = 105 bits (262), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 57/124 (45%), Positives = 79/124 (63%), Gaps = 7/124 (5%)
Query: 16 EQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKA 75
E+ L +I+AR+ AY PYSK VGAALL + + TGCN+E ASYG T CAE+TAI K+
Sbjct: 3 EKELMKKAIEAREKAYVPYSKFPVGAALLTKSGKVHTGCNIECASYGATNCAERTAIFKS 62
Query: 76 ISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQVGLIT 135
+SEG IAV + D N + PCG CRQVI E+ +I+++I KS+ + + T
Sbjct: 63 VSEGDLDIDMIAV---VGDENAYTYPCGICRQVIVEYGK---NIKLIIGKSEE-EYKVYT 115
Query: 136 IDGM 139
I+ +
Sbjct: 116 IENL 119
>gi|452991316|emb|CCQ97376.1| Cytidine deaminase [Clostridium ultunense Esp]
Length = 134
Score = 105 bits (262), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 52/101 (51%), Positives = 71/101 (70%), Gaps = 4/101 (3%)
Query: 16 EQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKA 75
+Q L +++A++ AY PYS +VGAALL +D ++TGCN+E ASY T+CAE+TAI KA
Sbjct: 3 KQYLIKKALEAQEKAYVPYSNFKVGAALLTEDGELYTGCNIEIASYSPTLCAERTAIFKA 62
Query: 76 ISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPA 116
+SEG K+I + A++ DS+ F PCG CRQVI EF A
Sbjct: 63 VSEGH---KKIKIIAVVGDSD-FTYPCGVCRQVIREFGKDA 99
>gi|270292562|ref|ZP_06198773.1| cytidine deaminase [Streptococcus sp. M143]
gi|270278541|gb|EFA24387.1| cytidine deaminase [Streptococcus sp. M143]
Length = 129
Score = 105 bits (262), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 52/116 (44%), Positives = 74/116 (63%), Gaps = 5/116 (4%)
Query: 18 NLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAIS 77
L L+I+ AY PYS +GA L+ +D +I+TG N+ENASY +T C E+TAI KA+S
Sbjct: 5 ELIELAIETSKYAYVPYSHFPIGAVLVAKDGSIYTGVNIENASYPLTNCGERTAIFKAVS 64
Query: 78 EGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQVGL 133
EGQ +F + V + K +SPCG+CRQV+ EF D++V +V D+S V +
Sbjct: 65 EGQREFSELIVYG---QTEKPISPCGACRQVMVEFFEQ--DLKVTLVAKDKSTVEM 115
>gi|160895173|ref|ZP_02075946.1| hypothetical protein CLOL250_02733 [Clostridium sp. L2-50]
gi|156863207|gb|EDO56638.1| cytidine deaminase [Clostridium sp. L2-50]
Length = 138
Score = 105 bits (262), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 51/120 (42%), Positives = 76/120 (63%), Gaps = 4/120 (3%)
Query: 19 LANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISE 78
+ L++QAR AY PYS QVGA + ++ + +TGCN+ENASYG T CAE+TA+ KA+SE
Sbjct: 9 MIELAMQARTKAYAPYSNFQVGACIKMENGSYYTGCNIENASYGATNCAERTAVFKAVSE 68
Query: 79 GQTKFKRIAVSAILPDSN-KFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQVGLITID 137
G K I + L + + PCG CRQVIAEF+ C V++V ++ + + +++
Sbjct: 69 GCRKLSAIVIVGGLKNGECDYTYPCGICRQVIAEFAEQDC---VIVVAKNKQEYRMYSVE 125
>gi|440780689|ref|ZP_20959160.1| cytidine deaminase [Clostridium pasteurianum DSM 525]
gi|440221277|gb|ELP60482.1| cytidine deaminase [Clostridium pasteurianum DSM 525]
Length = 131
Score = 105 bits (262), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 51/97 (52%), Positives = 68/97 (70%), Gaps = 3/97 (3%)
Query: 23 SIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQTK 82
+++AR+ AY PYSK +VGAA++ DD +++GCN+ENASYG T CAE+TAI KA+SE
Sbjct: 10 AMEAREKAYAPYSKFKVGAAVIMDDDKLYSGCNIENASYGATNCAERTAIFKAVSEESKI 69
Query: 83 FKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDI 119
K I AI+ D+ + PCG CRQVI EFS +I
Sbjct: 70 IKAI---AIVGDTVNYTYPCGICRQVIEEFSDGNTNI 103
>gi|268580973|ref|XP_002645469.1| C. briggsae CBR-CDD-1 protein [Caenorhabditis briggsae]
Length = 158
Score = 105 bits (262), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 55/128 (42%), Positives = 78/128 (60%), Gaps = 7/128 (5%)
Query: 12 LDPIEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTA 71
L EQ L + +++A + AYC YS +VGAAL+C+D I G N ENASYG TICAE++A
Sbjct: 8 LSEFEQKLVDKAVEAMERAYCKYSNFKVGAALVCEDGEIIIGANHENASYGATICAERSA 67
Query: 72 ISKAISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQV 131
+ A+++G KFK IA++ L + SPCG CRQ + EF D +V++ S Q+
Sbjct: 68 VVTALTKGHRKFKMIAIATELEEP---CSPCGICRQFLIEFG----DYKVILGSSTSDQI 120
Query: 132 GLITIDGM 139
T G+
Sbjct: 121 IETTSYGL 128
>gi|307704616|ref|ZP_07641518.1| cytidine deaminase [Streptococcus mitis SK597]
gi|383938631|ref|ZP_09991836.1| cytidine deaminase [Streptococcus pseudopneumoniae SK674]
gi|417849065|ref|ZP_12494993.1| cytidine deaminase [Streptococcus mitis SK1080]
gi|418974096|ref|ZP_13522028.1| cytidine deaminase [Streptococcus pseudopneumoniae ATCC BAA-960]
gi|307621818|gb|EFO00853.1| cytidine deaminase [Streptococcus mitis SK597]
gi|339457266|gb|EGP69843.1| cytidine deaminase [Streptococcus mitis SK1080]
gi|383345905|gb|EID23990.1| cytidine deaminase [Streptococcus pseudopneumoniae ATCC BAA-960]
gi|383714486|gb|EID70487.1| cytidine deaminase [Streptococcus pseudopneumoniae SK674]
Length = 129
Score = 105 bits (262), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 51/116 (43%), Positives = 74/116 (63%), Gaps = 5/116 (4%)
Query: 18 NLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAIS 77
L L+I+ AY PYS +GA L+ +D +++TG N+ENASY +T C E+TAI KA+S
Sbjct: 5 ELIELAIETSKKAYVPYSHFPIGAVLVAKDGSVYTGVNIENASYPLTNCGERTAIFKAVS 64
Query: 78 EGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQVGL 133
EGQ +F + V + K +SPCG+CRQV+ EF D++V +V D+S V +
Sbjct: 65 EGQREFSELIVYG---QTEKPISPCGACRQVMVEFFEQ--DLKVTLVAKDKSTVEM 115
>gi|406586748|ref|ZP_11061672.1| cytidine deaminase [Streptococcus sp. GMD1S]
gi|419813865|ref|ZP_14338674.1| cytidine deaminase [Streptococcus sp. GMD2S]
gi|404472466|gb|EKA16889.1| cytidine deaminase [Streptococcus sp. GMD2S]
gi|404473759|gb|EKA18086.1| cytidine deaminase [Streptococcus sp. GMD1S]
Length = 129
Score = 105 bits (262), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 51/116 (43%), Positives = 74/116 (63%), Gaps = 5/116 (4%)
Query: 18 NLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAIS 77
L L+I+ AY PYS +GA L+ +D +++TG N+ENASY +T C E+TAI KA+S
Sbjct: 5 ELIELAIETSKQAYVPYSHFPIGAVLVAKDGSVYTGVNIENASYPLTNCGERTAIFKAVS 64
Query: 78 EGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQVGL 133
EGQ +F + V + K +SPCG+CRQV+ EF D++V +V D+S V +
Sbjct: 65 EGQREFSELIVYG---QTEKPISPCGACRQVMVEFFEQ--DLKVTLVAKDKSTVEM 115
>gi|307708539|ref|ZP_07645004.1| cytidine deaminase [Streptococcus mitis NCTC 12261]
gi|307615455|gb|EFN94663.1| cytidine deaminase [Streptococcus mitis NCTC 12261]
Length = 129
Score = 105 bits (262), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 52/116 (44%), Positives = 74/116 (63%), Gaps = 5/116 (4%)
Query: 18 NLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAIS 77
L L+I+ AY PYS +GA L+ +D + +TG N+ENASY +T C E+TAI KA+S
Sbjct: 5 ELIELAIETSKKAYVPYSHFPIGAVLVAKDGSSYTGVNIENASYSLTNCGERTAIFKAVS 64
Query: 78 EGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQVGL 133
EGQ +F + V + K +SPCG+CRQV+AEF D++V +V D+S V +
Sbjct: 65 EGQREFSELIVYG---QTEKPISPCGACRQVMAEFFEQ--DLKVTLVAKDKSTVEM 115
>gi|227872745|ref|ZP_03991068.1| cytidine deaminase [Oribacterium sinus F0268]
gi|227841406|gb|EEJ51713.1| cytidine deaminase [Oribacterium sinus F0268]
Length = 152
Score = 105 bits (262), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 53/111 (47%), Positives = 70/111 (63%), Gaps = 3/111 (2%)
Query: 19 LANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISE 78
L ++QAR AY PYS QVG AL +F GCNVENASYG + C E+TA+ KA+SE
Sbjct: 20 LIRKALQARRKAYSPYSHFQVGVALETDSGEVFLGCNVENASYGASNCGERTAVFKAVSE 79
Query: 79 GQTKFKRIAVSAILPDSNK--FVSPCGSCRQVIAEFSSPACDIQVLIVKSD 127
G F+RIA+ + DS + + PCG CRQV+AEF QV++ K++
Sbjct: 80 GYKHFRRIAIVGGMKDSEELSYCMPCGICRQVMAEFVDLQ-SFQVILAKNE 129
>gi|324526866|gb|ADY48725.1| Cytidine deaminase [Ascaris suum]
Length = 156
Score = 105 bits (262), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 49/108 (45%), Positives = 75/108 (69%), Gaps = 7/108 (6%)
Query: 19 LANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISE 78
L N + +A + +YCPYSK +VGAA+L +D + TG NVENASYG TICAE++A+ +A++E
Sbjct: 23 LVNAAKRAMERSYCPYSKFRVGAAVLTKDGAVITGGNVENASYGGTICAERSAVVRAVAE 82
Query: 79 GQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKS 126
G T+F+ IA++ + +SPCG CRQ + EF ++QV++ +
Sbjct: 83 GYTEFRAIAIAGATAEP---ISPCGICRQFLVEFG----NVQVIMAST 123
>gi|241955104|ref|XP_002420273.1| cytidine aminohydrolase, putative; cytidine deaminase, putative
[Candida dubliniensis CD36]
gi|223643614|emb|CAX42497.1| cytidine aminohydrolase, putative [Candida dubliniensis CD36]
Length = 147
Score = 105 bits (262), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 55/106 (51%), Positives = 71/106 (66%), Gaps = 10/106 (9%)
Query: 8 EFSALDPIEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICA 67
EFS L ++N+ I+A+ AYCPYSK +VG ALL + +G NVENASYG +CA
Sbjct: 16 EFSKL---KENV----IKAKSTAYCPYSKFRVGCALLTESGEFISGANVENASYGAGVCA 68
Query: 68 EKTAISKAISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFS 113
E+TAI KA++EG TKFK IAV+ D ++PCG CRQ I EF+
Sbjct: 69 ERTAIVKAVTEGHTKFKAIAVAGNTKDP---ITPCGICRQFIREFA 111
>gi|387761153|ref|YP_006068130.1| cytidine deaminase [Streptococcus salivarius 57.I]
gi|418017665|ref|ZP_12657221.1| cytidine deaminase [Streptococcus salivarius M18]
gi|339291920|gb|AEJ53267.1| cytidine deaminase [Streptococcus salivarius 57.I]
gi|345526514|gb|EGX29825.1| cytidine deaminase [Streptococcus salivarius M18]
Length = 132
Score = 105 bits (262), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 52/103 (50%), Positives = 73/103 (70%), Gaps = 5/103 (4%)
Query: 31 YCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQTKFKRIAVSA 90
Y PYS+ +VGAALL +D IF GCN+ENAS+G+T CAE+TAI KA+SEG F+ +AV
Sbjct: 21 YVPYSRFRVGAALLTKDGQIFQGCNIENASFGLTNCAERTAIFKAVSEGYRDFECLAVYG 80
Query: 91 ILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQVGL 133
D+ + +SPCG+CRQV+ EF D +V+++ D+S V +
Sbjct: 81 ---DTKEPISPCGACRQVMVEFLKS--DSKVILIAEDKSTVEM 118
>gi|417916839|ref|ZP_12560408.1| cytidine deaminase [Streptococcus mitis bv. 2 str. SK95]
gi|342828180|gb|EGU62555.1| cytidine deaminase [Streptococcus mitis bv. 2 str. SK95]
Length = 129
Score = 105 bits (262), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 51/115 (44%), Positives = 73/115 (63%), Gaps = 5/115 (4%)
Query: 19 LANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISE 78
L L+I+ AY PYS +GA L+ +D ++TG N+ENASY +T C E+TAI KA+SE
Sbjct: 6 LIELAIETSKQAYVPYSHFPIGAVLVAKDGNVYTGVNIENASYSLTNCGERTAIFKAVSE 65
Query: 79 GQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQVGL 133
GQ +F + V + K +SPCG+CRQV+ EF D++V +V D+S V +
Sbjct: 66 GQREFSELIVYG---QTEKPISPCGACRQVMVEFFEQ--DLKVTLVAKDKSTVEM 115
>gi|154249683|ref|YP_001410508.1| cytidine deaminase [Fervidobacterium nodosum Rt17-B1]
gi|154153619|gb|ABS60851.1| cytidine deaminase [Fervidobacterium nodosum Rt17-B1]
Length = 137
Score = 105 bits (262), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 49/96 (51%), Positives = 70/96 (72%), Gaps = 3/96 (3%)
Query: 19 LANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISE 78
L ++ + R+ AY PYS +VGA L+ ++ +FTG NVENASYG+T CAE+TAI KA+SE
Sbjct: 13 LIEIAKEVREQAYAPYSNFKVGAVLVTKNGKVFTGVNVENASYGLTNCAERTAIFKAVSE 72
Query: 79 GQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSS 114
G+ F + V A +++K V+PCG+CRQV+AEF +
Sbjct: 73 GERDFDTLVVIA---NTDKPVAPCGACRQVMAEFGN 105
>gi|229192510|ref|ZP_04319473.1| Cytidine deaminase [Bacillus cereus ATCC 10876]
gi|228591087|gb|EEK48943.1| Cytidine deaminase [Bacillus cereus ATCC 10876]
Length = 132
Score = 105 bits (262), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 51/90 (56%), Positives = 65/90 (72%), Gaps = 3/90 (3%)
Query: 23 SIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQTK 82
+I+AR AY PYSK QVGAALL + ++ GCNVENASYG+ CAE+TA+ KA+SEG +
Sbjct: 10 AIEARKQAYVPYSKFQVGAALLTRGGKVYRGCNVENASYGLCNCAERTALFKAVSEGDKE 69
Query: 83 FKRIAVSAILPDSNKFVSPCGSCRQVIAEF 112
F IAV A D+ + V PCG+CRQV+ E
Sbjct: 70 FVAIAVVA---DTKRPVPPCGACRQVMVEL 96
>gi|308070842|ref|YP_003872447.1| cytidine deaminase [Paenibacillus polymyxa E681]
gi|305860121|gb|ADM71909.1| Cytidine deaminase (Cytidine aminohydrolase) [Paenibacillus
polymyxa E681]
Length = 131
Score = 105 bits (262), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 54/99 (54%), Positives = 69/99 (69%), Gaps = 3/99 (3%)
Query: 15 IEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISK 74
++ L +++AR AY PYS QVGAA+L D TI+ GCNVENASYG+ CAE+TAI K
Sbjct: 1 MKDQLIQKALEARKQAYVPYSNFQVGAAVLGSDGTIYHGCNVENASYGLCNCAERTAIFK 60
Query: 75 AISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFS 113
+SEG + IAV A D+ VSPCG+CRQVI+EF+
Sbjct: 61 MVSEGCRQIDSIAVVA---DTEGPVSPCGACRQVISEFA 96
>gi|227498624|ref|ZP_03928768.1| cytidine deaminase [Acidaminococcus sp. D21]
gi|352683913|ref|YP_004895897.1| cytidine deaminase [Acidaminococcus intestini RyC-MR95]
gi|226904080|gb|EEH89998.1| cytidine deaminase [Acidaminococcus sp. D21]
gi|350278567|gb|AEQ21757.1| cytidine deaminase [Acidaminococcus intestini RyC-MR95]
Length = 128
Score = 105 bits (262), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 49/87 (56%), Positives = 63/87 (72%), Gaps = 3/87 (3%)
Query: 26 ARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQTKFKR 85
AR NAY PYS VGAA+ +D +FTGCN+ENASYG+T+CAE+ AI A+ EG F+
Sbjct: 12 ARKNAYVPYSHFAVGAAVRAKDGRVFTGCNIENASYGLTVCAERNAIFAAVKEGVRDFET 71
Query: 86 IAVSAILPDSNKFVSPCGSCRQVIAEF 112
+ V+A D+ VSPCG+CRQV+AEF
Sbjct: 72 LLVTA---DTEGPVSPCGACRQVMAEF 95
>gi|429761465|ref|ZP_19293890.1| cytidine deaminase [Anaerostipes hadrus DSM 3319]
gi|429183718|gb|EKY24759.1| cytidine deaminase [Anaerostipes hadrus DSM 3319]
Length = 125
Score = 105 bits (261), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 52/112 (46%), Positives = 75/112 (66%), Gaps = 4/112 (3%)
Query: 16 EQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKA 75
+Q L + + +A++ AY PYS+ QVGAA+L ++ +FTGCNVEN+SYG ICAE+TA KA
Sbjct: 3 DQELLDFADKAKEKAYAPYSRFQVGAAILTKEGKVFTGCNVENSSYGAAICAERTAAVKA 62
Query: 76 ISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSD 127
+SEG F+ IA+++ D V PCG CRQ + EF+ D++V+ D
Sbjct: 63 VSEGYHDFEMIAIASNGSDKET-VYPCGICRQFLHEFNP---DLKVICQSPD 110
>gi|30022379|ref|NP_834010.1| cytidine deaminase [Bacillus cereus ATCC 14579]
gi|218232971|ref|YP_002369108.1| cytidine deaminase [Bacillus cereus B4264]
gi|228923053|ref|ZP_04086346.1| Cytidine deaminase [Bacillus thuringiensis serovar huazhongensis
BGSC 4BD1]
gi|228941466|ref|ZP_04104017.1| Cytidine deaminase [Bacillus thuringiensis serovar berliner ATCC
10792]
gi|228974397|ref|ZP_04134966.1| Cytidine deaminase [Bacillus thuringiensis serovar thuringiensis
str. T01001]
gi|228980990|ref|ZP_04141293.1| Cytidine deaminase [Bacillus thuringiensis Bt407]
gi|229129578|ref|ZP_04258548.1| Cytidine deaminase [Bacillus cereus BDRD-Cer4]
gi|229152501|ref|ZP_04280693.1| Cytidine deaminase [Bacillus cereus m1550]
gi|384188374|ref|YP_005574270.1| cytidine deaminase [Bacillus thuringiensis serovar chinensis CT-43]
gi|410676689|ref|YP_006929060.1| cytidine deaminase Cdd [Bacillus thuringiensis Bt407]
gi|423385802|ref|ZP_17363058.1| cytidine deaminase [Bacillus cereus BAG1X1-2]
gi|423527841|ref|ZP_17504286.1| cytidine deaminase [Bacillus cereus HuB1-1]
gi|423582509|ref|ZP_17558620.1| cytidine deaminase [Bacillus cereus VD014]
gi|423585219|ref|ZP_17561306.1| cytidine deaminase [Bacillus cereus VD045]
gi|423634875|ref|ZP_17610528.1| cytidine deaminase [Bacillus cereus VD156]
gi|452200766|ref|YP_007480847.1| Cytidine deaminase [Bacillus thuringiensis serovar thuringiensis
str. IS5056]
gi|29897937|gb|AAP11211.1| Cytidine deaminase [Bacillus cereus ATCC 14579]
gi|218160928|gb|ACK60920.1| cytidine deaminase [Bacillus cereus B4264]
gi|228631109|gb|EEK87746.1| Cytidine deaminase [Bacillus cereus m1550]
gi|228653895|gb|EEL09763.1| Cytidine deaminase [Bacillus cereus BDRD-Cer4]
gi|228778781|gb|EEM27045.1| Cytidine deaminase [Bacillus thuringiensis Bt407]
gi|228785447|gb|EEM33457.1| Cytidine deaminase [Bacillus thuringiensis serovar thuringiensis
str. T01001]
gi|228818247|gb|EEM64321.1| Cytidine deaminase [Bacillus thuringiensis serovar berliner ATCC
10792]
gi|228836686|gb|EEM82034.1| Cytidine deaminase [Bacillus thuringiensis serovar huazhongensis
BGSC 4BD1]
gi|326942083|gb|AEA17979.1| cytidine deaminase [Bacillus thuringiensis serovar chinensis CT-43]
gi|401213388|gb|EJR20129.1| cytidine deaminase [Bacillus cereus VD014]
gi|401233862|gb|EJR40348.1| cytidine deaminase [Bacillus cereus VD045]
gi|401278861|gb|EJR84791.1| cytidine deaminase [Bacillus cereus VD156]
gi|401635858|gb|EJS53613.1| cytidine deaminase [Bacillus cereus BAG1X1-2]
gi|402451504|gb|EJV83323.1| cytidine deaminase [Bacillus cereus HuB1-1]
gi|409175818|gb|AFV20123.1| cytidine deaminase Cdd [Bacillus thuringiensis Bt407]
gi|452106159|gb|AGG03099.1| Cytidine deaminase [Bacillus thuringiensis serovar thuringiensis
str. IS5056]
Length = 132
Score = 105 bits (261), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 51/90 (56%), Positives = 65/90 (72%), Gaps = 3/90 (3%)
Query: 23 SIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQTK 82
+I+AR AY PYSK QVGAALL + ++ GCNVENASYG+ CAE+TA+ KA+SEG +
Sbjct: 10 AIEARKQAYVPYSKFQVGAALLTRGGKVYRGCNVENASYGLCNCAERTALFKAVSEGDKE 69
Query: 83 FKRIAVSAILPDSNKFVSPCGSCRQVIAEF 112
F IAV A D+ + V PCG+CRQV+ E
Sbjct: 70 FVAIAVVA---DTKRPVPPCGACRQVMVEL 96
>gi|366165037|ref|ZP_09464792.1| cytidine deaminase [Acetivibrio cellulolyticus CD2]
Length = 129
Score = 105 bits (261), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 51/97 (52%), Positives = 66/97 (68%), Gaps = 3/97 (3%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
+NL L+ + NAY PYS VGAAL+ ++TG N+EN+SYG TICAE+TAI KAI
Sbjct: 4 ENLVKLANDIKKNAYAPYSNFHVGAALIGNSGKVYTGVNIENSSYGATICAERTAICKAI 63
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFS 113
SEG+ K IA+++ DS + PCG CRQVI EF+
Sbjct: 64 SEGEKSIKAIAIAS---DSEDYTFPCGICRQVILEFA 97
>gi|255994493|ref|ZP_05427628.1| cytidine deaminase [Eubacterium saphenum ATCC 49989]
gi|255993206|gb|EEU03295.1| cytidine deaminase [Eubacterium saphenum ATCC 49989]
Length = 136
Score = 105 bits (261), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 54/126 (42%), Positives = 85/126 (67%), Gaps = 8/126 (6%)
Query: 15 IEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISK 74
+E+ L N + NAY PYS ++VGAALL I+TG NVENAS+G TICAE+ A+SK
Sbjct: 8 MEEKLMNEAKNVLHNAYSPYSDIKVGAALLTSSGRIYTGVNVENASFGATICAERVAVSK 67
Query: 75 AISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQVGLI 134
A+++G++ FK IA+++ + + + PCG CRQV+AEF+ DI+ LI+++ ++ +
Sbjct: 68 AVTDGESNFKAIAIAS----NTEGIVPCGICRQVLAEFNK---DIK-LIMQAANDEITVK 119
Query: 135 TIDGMY 140
+ +Y
Sbjct: 120 KLSEVY 125
>gi|299821344|ref|ZP_07053232.1| cytidine deaminase [Listeria grayi DSM 20601]
gi|299817009|gb|EFI84245.1| cytidine deaminase [Listeria grayi DSM 20601]
Length = 131
Score = 105 bits (261), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 51/106 (48%), Positives = 71/106 (66%), Gaps = 3/106 (2%)
Query: 25 QARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQTKFK 84
QAR+ AY PYS VGAAL+ +D + GCN+ENAS+G+T CAE+TAI KA+S G+ F+
Sbjct: 12 QAREFAYTPYSHFPVGAALVTKDGEVIQGCNIENASFGLTNCAERTAIFKAVSTGEKDFQ 71
Query: 85 RIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQ 130
+ V A D+ V+PCG+CRQVI+EF P + + +K + Q
Sbjct: 72 HLVVVA---DTEGPVAPCGACRQVISEFCEPDMPVTLTNLKGNTVQ 114
>gi|257438410|ref|ZP_05614165.1| cytidine deaminase [Faecalibacterium prausnitzii A2-165]
gi|257198989|gb|EEU97273.1| cytidine deaminase [Faecalibacterium prausnitzii A2-165]
Length = 149
Score = 105 bits (261), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 54/113 (47%), Positives = 76/113 (67%), Gaps = 4/113 (3%)
Query: 16 EQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKA 75
++ L ++++AR+ AY PYS VGAAL +D IFTGCNVENA++ T CAE+TA+ KA
Sbjct: 9 KKALIRMALEAREQAYVPYSDFMVGAALRAEDGRIFTGCNVENAAFTPTSCAERTALFKA 68
Query: 76 ISEGQTKFKRIA-VSAILPDSNK-FVSPCGSCRQVIAEFSSPACDIQVLIVKS 126
+SEG T+F IA V + + NK SPCG CRQ + EF P ++ V++ K+
Sbjct: 69 VSEGVTRFTDIAVVGSRRGEVNKQITSPCGVCRQALFEFGGP--ELNVIMAKT 119
>gi|307194473|gb|EFN76765.1| Cytidine deaminase [Harpegnathos saltator]
Length = 139
Score = 105 bits (261), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 55/115 (47%), Positives = 73/115 (63%), Gaps = 5/115 (4%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
Q L S R+N+Y PYSK +VGAA+ C D +I GCNVENAS+ +CAE +AI +A+
Sbjct: 9 QELIRESAVVRENSYSPYSKFKVGAAVRCADGSISKGCNVENASFPAGVCAETSAIVRAV 68
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQV 131
SEG+ +FK + V A D+ F +PCG CRQVI EF DI + + +SD V
Sbjct: 69 SEGKKQFKALTVVAD-HDNTIFTAPCGVCRQVIVEFG----DIPIYLTRSDMKMV 118
>gi|158320286|ref|YP_001512793.1| cytidine deaminase [Alkaliphilus oremlandii OhILAs]
gi|158140485|gb|ABW18797.1| cytidine deaminase [Alkaliphilus oremlandii OhILAs]
Length = 140
Score = 105 bits (261), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 57/124 (45%), Positives = 81/124 (65%), Gaps = 7/124 (5%)
Query: 16 EQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKA 75
++ L +I+A+ NAY PYSK VGAALL ++ ++ GCN+E ASYG T CAE+TAI KA
Sbjct: 3 DRELVREAIEAKKNAYVPYSKFPVGAALLTKEGKVYRGCNIECASYGGTNCAERTAIFKA 62
Query: 76 ISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQVGLIT 135
+SEG + IAV + L D + PCG CRQVI E+ DI+++I KS+ + + T
Sbjct: 63 VSEGDRNIEAIAVVSDLDD---YTYPCGICRQVIVEYGR---DIKLIIGKSE-EEFKVYT 115
Query: 136 IDGM 139
I+ +
Sbjct: 116 INDL 119
>gi|217967706|ref|YP_002353212.1| cytidine deaminase [Dictyoglomus turgidum DSM 6724]
gi|217336805|gb|ACK42598.1| cytidine deaminase [Dictyoglomus turgidum DSM 6724]
Length = 131
Score = 105 bits (261), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 49/114 (42%), Positives = 76/114 (66%), Gaps = 6/114 (5%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
+ L L+++A +N+Y PYS VG ALL ++ ++ G N+ENASYG+TICAE+ AI KA+
Sbjct: 4 KKLYELALKALENSYSPYSNFPVGVALLTKNGKVYLGTNIENASYGLTICAERVAIFKAV 63
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQ 130
SEG+ +F +I I+ V PCG+CRQV+ EFS D+++L+ ++ +
Sbjct: 64 SEGEREFSKI---VIVGKDGSGVPPCGACRQVMFEFSP---DMEILLYDKEKGK 111
>gi|324523653|gb|ADY48279.1| Cytidine deaminase [Ascaris suum]
Length = 142
Score = 105 bits (261), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 56/112 (50%), Positives = 73/112 (65%), Gaps = 7/112 (6%)
Query: 19 LANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISE 78
L + +A + AYCPYSK QVGAALL +D TI TG NVE ASYG TICAE++A+ +AI+E
Sbjct: 8 LVEAAKKAMERAYCPYSKFQVGAALLTEDGTIITGGNVECASYGCTICAERSAVVRAIAE 67
Query: 79 GQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQ 130
G KF+ IAV+ D PCG CRQ++ EF DI V++ S ++
Sbjct: 68 GHNKFQAIAVATACSDPT---PPCGICRQLLIEFG----DIPVIMASSTSNK 112
>gi|17551074|ref|NP_509384.1| Protein CDD-1 [Caenorhabditis elegans]
gi|373219002|emb|CCD64989.1| Protein CDD-1 [Caenorhabditis elegans]
Length = 158
Score = 105 bits (261), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 57/120 (47%), Positives = 73/120 (60%), Gaps = 7/120 (5%)
Query: 12 LDPIEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTA 71
L EQ L + +I A +NAYC YS +VGAAL+C D I G N ENASYG TICAE++A
Sbjct: 8 LTEFEQQLVDKAIGAMENAYCKYSNFKVGAALVCDDGEIIIGANHENASYGATICAERSA 67
Query: 72 ISKAISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQV 131
I A+++G KFK I V+ L SPCG CRQV+ EF D +V++ S Q+
Sbjct: 68 IVTALTKGHRKFKYIVVATELEAP---CSPCGVCRQVLIEFG----DYKVILGSSTSDQI 120
>gi|225175053|ref|ZP_03729049.1| cytidine deaminase [Dethiobacter alkaliphilus AHT 1]
gi|225169229|gb|EEG78027.1| cytidine deaminase [Dethiobacter alkaliphilus AHT 1]
Length = 129
Score = 105 bits (261), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 48/89 (53%), Positives = 66/89 (74%), Gaps = 3/89 (3%)
Query: 25 QARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQTKFK 84
+AR+NAY PYS+ VGAALL D IFTGCNVEN S+G+T+CAE+ A A++ G+ +F
Sbjct: 13 EARENAYAPYSRFSVGAALLTADGEIFTGCNVENLSFGLTLCAERVAAFSAVAAGKREFT 72
Query: 85 RIAVSAILPDSNKFVSPCGSCRQVIAEFS 113
+ A++ D+ + V+PCGSCRQV+ EFS
Sbjct: 73 GL---ALITDTPQPVTPCGSCRQVLYEFS 98
>gi|198422784|ref|XP_002128314.1| PREDICTED: similar to Cytidine deaminase [Ciona intestinalis]
Length = 136
Score = 104 bits (260), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 54/113 (47%), Positives = 72/113 (63%), Gaps = 6/113 (5%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
+ L L+ A+ AYCPYSK QVGAA++ ++ +FTGCNVENA Y + +CAE+TAI KA+
Sbjct: 9 EALIALADGAKQRAYCPYSKFQVGAAVVVENGDVFTGCNVENACYPVGVCAERTAICKAV 68
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRS 129
SEG TK +AV + + PCG CRQ I EF + D+ + K DRS
Sbjct: 69 SEGHTKLVAVAV---ITNGKTVNFPCGLCRQSIREFGT---DVTIYCAKKDRS 115
>gi|339499666|ref|YP_004697701.1| cytidine deaminase [Spirochaeta caldaria DSM 7334]
gi|338834015|gb|AEJ19193.1| cytidine deaminase [Spirochaeta caldaria DSM 7334]
Length = 133
Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 48/96 (50%), Positives = 70/96 (72%), Gaps = 2/96 (2%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
+ L + +A + +Y PYS +VGAALLC+D +IFTG NVEN S+G+TICAE++A+ A+
Sbjct: 4 EQLFETARKAAEASYSPYSHFKVGAALLCEDGSIFTGTNVENRSFGLTICAERSAVVAAV 63
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEF 112
S G+ +F +A++ PDS V PCG+CRQV++EF
Sbjct: 64 SAGKRRF--VALAIATPDSIDPVGPCGACRQVLSEF 97
>gi|229916957|ref|YP_002885603.1| cytidine deaminase [Exiguobacterium sp. AT1b]
gi|229468386|gb|ACQ70158.1| cytidine deaminase [Exiguobacterium sp. AT1b]
Length = 132
Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 54/114 (47%), Positives = 73/114 (64%), Gaps = 7/114 (6%)
Query: 16 EQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKA 75
+Q L + Q +DNAY PYSK +VGAALL +D T+ G NVEN S+G T CAE+TAI A
Sbjct: 3 QQQLVERARQLKDNAYSPYSKFRVGAALLMKDGTVIDGVNVENVSFGATNCAERTAIFTA 62
Query: 76 ISEGQTK--FKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSD 127
+++G K F+ +AVS D+ F+ PC CRQV+ EF P D +VL+ +
Sbjct: 63 VAKGYKKGDFEAVAVSG---DTEDFLPPCSICRQVMVEFGDP--DFKVLLTNGN 111
>gi|253751839|ref|YP_003024980.1| cytidine deaminase [Streptococcus suis SC84]
gi|253753662|ref|YP_003026803.1| cytidine deaminase [Streptococcus suis P1/7]
gi|253755457|ref|YP_003028597.1| cytidine deaminase [Streptococcus suis BM407]
gi|386580002|ref|YP_006076407.1| cytidine deaminase [Streptococcus suis JS14]
gi|386582026|ref|YP_006078430.1| cytidine deaminase [Streptococcus suis SS12]
gi|386588214|ref|YP_006084615.1| cytidine deaminase [Streptococcus suis A7]
gi|251816128|emb|CAZ51752.1| cytidine deaminase [Streptococcus suis SC84]
gi|251817921|emb|CAZ55698.1| cytidine deaminase [Streptococcus suis BM407]
gi|251819908|emb|CAR45970.1| cytidine deaminase [Streptococcus suis P1/7]
gi|319758194|gb|ADV70136.1| cytidine deaminase [Streptococcus suis JS14]
gi|353734172|gb|AER15182.1| cytidine deaminase [Streptococcus suis SS12]
gi|354985375|gb|AER44273.1| cytidine deaminase [Streptococcus suis A7]
Length = 129
Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 55/114 (48%), Positives = 73/114 (64%), Gaps = 5/114 (4%)
Query: 18 NLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAIS 77
+L L+++ AY PYSK V A L+ + IFTG N+ENAS+G+T CAE+TAI KAIS
Sbjct: 5 DLIELAVKNSQKAYVPYSKFPVSAVLVAKTGEIFTGVNIENASFGLTNCAERTAIFKAIS 64
Query: 78 EGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQV 131
EG F I I + K +SPCG+CRQV+AEF D++V +V D+S V
Sbjct: 65 EGVKDFSEI---IIYGKTEKPISPCGACRQVMAEFFDK--DLKVTLVAKDKSTV 113
>gi|255027718|ref|ZP_05299704.1| cytidine deaminase [Listeria monocytogenes FSL J2-003]
Length = 112
Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 51/91 (56%), Positives = 70/91 (76%), Gaps = 5/91 (5%)
Query: 33 PYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQTKFKRIAVSAIL 92
PYSK VGAAL+ +DD + GCN+ENAS+G+T CAE+TAI KA+SEG+ FK++ V A
Sbjct: 1 PYSKFPVGAALVTKDDEVVLGCNIENASFGLTNCAERTAIFKAVSEGKRDFKQLVVVA-- 58
Query: 93 PDSNKFVSPCGSCRQVIAEFSSPACDIQVLI 123
D++ VSPCG+CRQVI+EF +P D+ V++
Sbjct: 59 -DTDGPVSPCGACRQVISEFCAP--DMPVIL 86
>gi|225182105|ref|ZP_03735533.1| cytidine deaminase [Dethiobacter alkaliphilus AHT 1]
gi|225167192|gb|EEG76015.1| cytidine deaminase [Dethiobacter alkaliphilus AHT 1]
Length = 110
Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 48/89 (53%), Positives = 66/89 (74%), Gaps = 3/89 (3%)
Query: 25 QARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQTKFK 84
+AR+NAY PYS+ VGAALL D IFTGCNVEN S+G+T+CAE+ A A++ G+ +F
Sbjct: 13 EARENAYAPYSRFSVGAALLTADGEIFTGCNVENLSFGLTLCAERVAAFSAVAAGKREFT 72
Query: 85 RIAVSAILPDSNKFVSPCGSCRQVIAEFS 113
+ A++ D+ + V+PCGSCRQV+ EFS
Sbjct: 73 GL---ALITDTPQPVTPCGSCRQVLYEFS 98
>gi|126652810|ref|ZP_01724955.1| Cdd [Bacillus sp. B14905]
gi|126590346|gb|EAZ84466.1| Cdd [Bacillus sp. B14905]
Length = 137
Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 51/105 (48%), Positives = 70/105 (66%), Gaps = 3/105 (2%)
Query: 23 SIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQTK 82
S +AR+ AY PYSK +VGAALL + + GCN+ENA Y MT CAE+TA KA+SEG +
Sbjct: 12 SKKAREKAYVPYSKFKVGAALLTKAGEVIHGCNIENAGYSMTNCAERTAFFKAVSEGTYE 71
Query: 83 FKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSD 127
F+ IA+ A D+ +PCG+CRQV+ EF +P + + +K D
Sbjct: 72 FEAIAIVA---DTEGPCAPCGACRQVMMEFCAPTMPVYLTNLKGD 113
>gi|415885556|ref|ZP_11547484.1| cytidine deaminase [Bacillus methanolicus MGA3]
gi|387591225|gb|EIJ83544.1| cytidine deaminase [Bacillus methanolicus MGA3]
Length = 132
Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 51/98 (52%), Positives = 68/98 (69%), Gaps = 3/98 (3%)
Query: 15 IEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISK 74
I ++L + +AR+ AY PYSK VGA LL ++ GCN+ENA+Y MT CAE+TA+ K
Sbjct: 2 IMEHLIAEAKKAREKAYVPYSKFAVGAVLLTDGGKVYHGCNIENAAYSMTNCAERTALFK 61
Query: 75 AISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEF 112
A SEG+ KFK +AV A D+ + V PCG+CRQVI+E
Sbjct: 62 AFSEGERKFKALAVIA---DTKRPVPPCGACRQVISEL 96
>gi|51891671|ref|YP_074362.1| cytidine deaminase [Symbiobacterium thermophilum IAM 14863]
gi|51855360|dbj|BAD39518.1| cytidine deaminase [Symbiobacterium thermophilum IAM 14863]
Length = 137
Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 49/86 (56%), Positives = 66/86 (76%), Gaps = 3/86 (3%)
Query: 31 YCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQTKFKRIAVSA 90
Y PYS+ VGAA+L +D T++TGCN+ENAS+G+T CAE+TAI K +SEG+ +FK IAV A
Sbjct: 18 YVPYSRFAVGAAVLAEDGTLYTGCNIENASFGLTNCAERTAIFKMVSEGRRRFKAIAVIA 77
Query: 91 ILPDSNKFVSPCGSCRQVIAEFSSPA 116
D++ SPCG+CRQV++EF A
Sbjct: 78 ---DTDGPCSPCGACRQVMSEFGPDA 100
>gi|337749542|ref|YP_004643704.1| hypothetical protein KNP414_05310 [Paenibacillus mucilaginosus
KNP414]
gi|379722458|ref|YP_005314589.1| hypothetical protein PM3016_4696 [Paenibacillus mucilaginosus 3016]
gi|386725218|ref|YP_006191544.1| cytidine deaminase [Paenibacillus mucilaginosus K02]
gi|336300731|gb|AEI43834.1| Cdd2 [Paenibacillus mucilaginosus KNP414]
gi|378571130|gb|AFC31440.1| Cdd2 [Paenibacillus mucilaginosus 3016]
gi|384092343|gb|AFH63779.1| cytidine deaminase [Paenibacillus mucilaginosus K02]
Length = 132
Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 53/105 (50%), Positives = 72/105 (68%), Gaps = 4/105 (3%)
Query: 15 IEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISK 74
+++ L +++AR AY PYS +VGAALL I+ GCNVENASYG+T CAE+TA+ K
Sbjct: 1 MKEQLIQEALEARKAAYVPYSGFKVGAALLA-GGKIYRGCNVENASYGLTNCAERTAVFK 59
Query: 75 AISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDI 119
+SEG + + IAV+A D++ VSPCG+CRQV+AEF I
Sbjct: 60 MVSEGHQRIEAIAVTA---DTDGPVSPCGACRQVLAEFCEAGTKI 101
>gi|389609479|dbj|BAM18351.1| cytidine deaminase [Papilio xuthus]
Length = 158
Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 54/132 (40%), Positives = 82/132 (62%), Gaps = 3/132 (2%)
Query: 1 MVGHDIMEFSALDPIEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDT-IFTGCNVENA 59
M +I++F L+ Q+L + + R AYCPYS VGAA+L ++D+ ++TGCN+E+A
Sbjct: 1 MDNSEIIDFKTLNETVQDLIRQATKVRKFAYCPYSNFAVGAAILTEEDSKVYTGCNIESA 60
Query: 60 SYGMTICAEKTAISKAISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDI 119
++ ICAE+ AI KAI +G K K +AV A + F +PCG CRQ ++EF S DI
Sbjct: 61 TFSPCICAERAAIPKAICDGYLKIKIVAVVA--HQKSGFTAPCGVCRQTLSEFRSSDGDI 118
Query: 120 QVLIVKSDRSQV 131
++ + K +V
Sbjct: 119 EIYLSKPAMDKV 130
>gi|261367446|ref|ZP_05980329.1| cytidine deaminase [Subdoligranulum variabile DSM 15176]
gi|282570217|gb|EFB75752.1| cytidine deaminase [Subdoligranulum variabile DSM 15176]
Length = 147
Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 52/113 (46%), Positives = 71/113 (62%), Gaps = 2/113 (1%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
++L + AR AY PYS QVGAALL QD ++TGCN+ENA Y T CAE+TA+ KA+
Sbjct: 7 RSLIRQAFAARKFAYTPYSHFQVGAALLTQDGKVYTGCNIENAGYTPTNCAERTALFKAV 66
Query: 77 SEGQTKFKRIAVSAILPDS-NKFVS-PCGSCRQVIAEFSSPACDIQVLIVKSD 127
SEG+ KF IA+ + + N V+ PCG CRQ + EF P+ + + + D
Sbjct: 67 SEGERKFSAIAIVGSMQGTVNTLVTGPCGVCRQALFEFGGPSLTVIMARTEED 119
>gi|452821292|gb|EME28324.1| cytidine deaminase [Galdieria sulphuraria]
Length = 147
Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 48/98 (48%), Positives = 69/98 (70%), Gaps = 3/98 (3%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
Q+L +++ + NAY PYS VGA + Q +++GCNVENASYG++ICAE+TA+ KA+
Sbjct: 15 QDLKRQAVEVKKNAYVPYSHFPVGACICAQSGQLYSGCNVENASYGLSICAERTAVVKAV 74
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSS 114
SEG T F+ IA+S D+ V PCG+CRQ ++EF +
Sbjct: 75 SEGNTCFRAIAIST---DTTGEVWPCGACRQFLSEFGN 109
>gi|392988200|ref|YP_006486793.1| cytidine deaminase [Enterococcus hirae ATCC 9790]
gi|392335620|gb|AFM69902.1| cytidine deaminase [Enterococcus hirae ATCC 9790]
Length = 132
Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 49/110 (44%), Positives = 73/110 (66%), Gaps = 5/110 (4%)
Query: 15 IEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISK 74
++Q N++++A D AY PYS VGA L+ + + G N+ENAS+G+T CAE+TA K
Sbjct: 4 VKQEWINIAVEALDKAYVPYSHFPVGACLVTESGKTYQGVNIENASFGLTNCAERTAFFK 63
Query: 75 AISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIV 124
A+SEG+ +F + V+ P+ +SPCG+CRQV+AEF P D+ V +V
Sbjct: 64 AVSEGEKEFTHLVVAGHTPEP---ISPCGACRQVMAEFCVP--DMPVTLV 108
>gi|307127607|ref|YP_003879638.1| cytidine deaminase [Streptococcus pneumoniae 670-6B]
gi|417676590|ref|ZP_12326003.1| cytidine deaminase [Streptococcus pneumoniae GA17545]
gi|417693765|ref|ZP_12342954.1| cytidine deaminase [Streptococcus pneumoniae GA47901]
gi|418112189|ref|ZP_12749191.1| cytidine deaminase [Streptococcus pneumoniae GA41538]
gi|418132678|ref|ZP_12769551.1| cytidine deaminase [Streptococcus pneumoniae GA11304]
gi|418152577|ref|ZP_12789317.1| cytidine deaminase [Streptococcus pneumoniae GA16121]
gi|418154874|ref|ZP_12791605.1| cytidine deaminase [Streptococcus pneumoniae GA16242]
gi|418225263|ref|ZP_12851892.1| cytidine deaminase [Streptococcus pneumoniae NP112]
gi|419466289|ref|ZP_14006172.1| cytidine deaminase [Streptococcus pneumoniae GA05248]
gi|419512232|ref|ZP_14051866.1| cytidine deaminase [Streptococcus pneumoniae GA05578]
gi|419516516|ref|ZP_14056134.1| cytidine deaminase [Streptococcus pneumoniae GA02506]
gi|419525586|ref|ZP_14065150.1| cytidine deaminase [Streptococcus pneumoniae GA14373]
gi|421283025|ref|ZP_15733814.1| cytidine deaminase [Streptococcus pneumoniae GA04216]
gi|306484669|gb|ADM91538.1| cytidine deaminase [Streptococcus pneumoniae 670-6B]
gi|332077255|gb|EGI87717.1| cytidine deaminase [Streptococcus pneumoniae GA17545]
gi|332204848|gb|EGJ18913.1| cytidine deaminase [Streptococcus pneumoniae GA47901]
gi|353784055|gb|EHD64476.1| cytidine deaminase [Streptococcus pneumoniae GA41538]
gi|353806634|gb|EHD86907.1| cytidine deaminase [Streptococcus pneumoniae GA11304]
gi|353819222|gb|EHD99420.1| cytidine deaminase [Streptococcus pneumoniae GA16121]
gi|353823166|gb|EHE03341.1| cytidine deaminase [Streptococcus pneumoniae GA16242]
gi|353882571|gb|EHE62382.1| cytidine deaminase [Streptococcus pneumoniae NP112]
gi|379544412|gb|EHZ09556.1| cytidine deaminase [Streptococcus pneumoniae GA05248]
gi|379559060|gb|EHZ24090.1| cytidine deaminase [Streptococcus pneumoniae GA14373]
gi|379636702|gb|EIA01260.1| cytidine deaminase [Streptococcus pneumoniae GA05578]
gi|379640519|gb|EIA05058.1| cytidine deaminase [Streptococcus pneumoniae GA02506]
gi|395882891|gb|EJG93935.1| cytidine deaminase [Streptococcus pneumoniae GA04216]
Length = 129
Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 51/115 (44%), Positives = 73/115 (63%), Gaps = 5/115 (4%)
Query: 19 LANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISE 78
L L+I+ +AY PYS +GA L+ +D ++TG N+EN SY +T C E+TAI KAISE
Sbjct: 6 LIELAIETSKHAYVPYSHFPIGAVLVAKDGNVYTGVNIENVSYPLTNCGERTAIFKAISE 65
Query: 79 GQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQVGL 133
GQ +F + V + K +SPCG+CRQV+ EF D++V +V D+S V +
Sbjct: 66 GQREFSELIVYG---QTEKPISPCGACRQVMVEFFEQ--DLKVTLVAKDKSTVEM 115
>gi|331092341|ref|ZP_08341168.1| cytidine deaminase [Lachnospiraceae bacterium 2_1_46FAA]
gi|330401574|gb|EGG81157.1| cytidine deaminase [Lachnospiraceae bacterium 2_1_46FAA]
Length = 137
Score = 104 bits (259), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 51/110 (46%), Positives = 75/110 (68%), Gaps = 3/110 (2%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
+ L + +AR +Y PYSK QVGAALL +D ++ GCN+ENASY T CAE+TA KA+
Sbjct: 4 RELLTEAKKARLKSYAPYSKFQVGAALLTKDGKVYHGCNIENASYTPTNCAERTAFFKAV 63
Query: 77 SEGQTKFKRIAVSAILP--DSNKFVSPCGSCRQVIAEFSSPACDIQVLIV 124
SEG T+F++IA+ D+++ +PCG CRQV+ EF +P + Q+++
Sbjct: 64 SEGDTEFEKIAIVGGKEGTDADELCAPCGVCRQVMMEFCNPE-EFQIILA 112
>gi|126458639|ref|YP_001054917.1| cytidine deaminase [Pyrobaculum calidifontis JCM 11548]
gi|126248360|gb|ABO07451.1| cytidine deaminase [Pyrobaculum calidifontis JCM 11548]
Length = 127
Score = 104 bits (259), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 52/104 (50%), Positives = 74/104 (71%), Gaps = 8/104 (7%)
Query: 28 DNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQTKFKRIA 87
+NAY PYSK +V AA+ + ++TG NVENASYG+T+CAE+ AI KA+SEG + I
Sbjct: 13 NNAYAPYSKFKVAAAVKTRSGKVYTGVNVENASYGLTVCAERVAIFKAVSEGD---RDIE 69
Query: 88 VSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQV 131
V A+ D+++ V+PCG+CRQVIAEF+ A L+V + R++V
Sbjct: 70 VVAVYVDADEPVAPCGACRQVIAEFNPNA-----LVVMASRNKV 108
>gi|417794625|ref|ZP_12441870.1| cytidine deaminase [Streptococcus oralis SK255]
gi|334268239|gb|EGL86682.1| cytidine deaminase [Streptococcus oralis SK255]
Length = 129
Score = 104 bits (259), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 51/116 (43%), Positives = 74/116 (63%), Gaps = 5/116 (4%)
Query: 18 NLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAIS 77
L L+I+ AY PYS +GA L+ +D +I+TG N+ENASY +T C E+TAI KA+S
Sbjct: 5 ELIELAIETSKQAYVPYSHFPIGAVLVAKDGSIYTGVNIENASYPLTNCGERTAIFKAVS 64
Query: 78 EGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQVGL 133
EG+ +F + V + K +SPCG+CRQV+ EF D++V +V D+S V +
Sbjct: 65 EGKREFSELIVYG---QTEKPISPCGACRQVMVEFFEQ--DLKVTLVAKDKSTVEM 115
>gi|317498491|ref|ZP_07956785.1| cytidine deaminase [Lachnospiraceae bacterium 5_1_63FAA]
gi|316894184|gb|EFV16372.1| cytidine deaminase [Lachnospiraceae bacterium 5_1_63FAA]
Length = 125
Score = 104 bits (259), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 54/113 (47%), Positives = 77/113 (68%), Gaps = 6/113 (5%)
Query: 16 EQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKA 75
+Q L + + +A++ AY PYS+ QVGAA+L ++ +FTGCNVEN+SYG ICAE+TA KA
Sbjct: 3 DQELLDFADKAKEKAYAPYSRFQVGAAILTKEGKVFTGCNVENSSYGAAICAERTAAVKA 62
Query: 76 ISEGQTKFKRIAVSAILPDSNK-FVSPCGSCRQVIAEFSSPACDIQVLIVKSD 127
+SEG F+ IA+++ SNK V PCG CRQ + EF+ D++V+ D
Sbjct: 63 VSEGYHDFEMIAIAS--NGSNKETVYPCGICRQFLHEFNP---DLKVICQSPD 110
>gi|228907626|ref|ZP_04071483.1| Cytidine deaminase [Bacillus thuringiensis IBL 200]
gi|228852118|gb|EEM96915.1| Cytidine deaminase [Bacillus thuringiensis IBL 200]
Length = 131
Score = 104 bits (259), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 51/103 (49%), Positives = 70/103 (67%), Gaps = 3/103 (2%)
Query: 29 NAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQTKFKRIAV 88
AY PYSK VGAAL+ ++ I+TGCN+ENASYG+ CAE+TAI KA+SEG+ F + V
Sbjct: 16 KAYIPYSKFPVGAALVTKEGKIYTGCNIENASYGLCNCAERTAIFKAVSEGERDFSYLVV 75
Query: 89 SAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQV 131
+ +++ +SPCG+CRQVIAEF + + VK D +V
Sbjct: 76 TG---ETDGPISPCGACRQVIAEFCDSKMPVLLTNVKGDEKEV 115
>gi|146302810|ref|YP_001190126.1| cytidine deaminase [Metallosphaera sedula DSM 5348]
gi|145701060|gb|ABP94202.1| cytidine deaminase [Metallosphaera sedula DSM 5348]
Length = 134
Score = 104 bits (259), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 50/117 (42%), Positives = 79/117 (67%), Gaps = 8/117 (6%)
Query: 13 DPIEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAI 72
DP ++ L NL+ A N+Y PYS ++VGAAL+ ++ + G NVEN+SYG++ICAE+ A+
Sbjct: 5 DPSDEELLNLAANAAKNSYSPYSGIRVGAALVGENGEVILGTNVENSSYGLSICAERVAV 64
Query: 73 SKAISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRS 129
A+++G KFK+IA+S L D + + PCG+CRQV+ EF +L++ D++
Sbjct: 65 FTAVTKGIRKFKKIAIS--LSDGSG-IMPCGACRQVLREFGR-----DILVITRDKT 113
>gi|342732210|ref|YP_004771049.1| cytidine deaminase [Candidatus Arthromitus sp. SFB-mouse-Japan]
gi|384455617|ref|YP_005668212.1| cytidine deaminase [Candidatus Arthromitus sp. SFB-mouse-Yit]
gi|417960402|ref|ZP_12603008.1| Cytidine deaminase [Candidatus Arthromitus sp. SFB-1]
gi|417968351|ref|ZP_12609380.1| Cytidine deaminase [Candidatus Arthromitus sp. SFB-co]
gi|418016388|ref|ZP_12655953.1| cytidine deaminase [Candidatus Arthromitus sp. SFB-mouse-NYU]
gi|418372464|ref|ZP_12964556.1| Cytidine deaminase [Candidatus Arthromitus sp. SFB-mouse-SU]
gi|342329665|dbj|BAK56307.1| cytidine deaminase [Candidatus Arthromitus sp. SFB-mouse-Japan]
gi|345506723|gb|EGX29017.1| cytidine deaminase [Candidatus Arthromitus sp. SFB-mouse-NYU]
gi|346983960|dbj|BAK79636.1| cytidine deaminase [Candidatus Arthromitus sp. SFB-mouse-Yit]
gi|380331119|gb|EIA22219.1| Cytidine deaminase [Candidatus Arthromitus sp. SFB-1]
gi|380339866|gb|EIA28534.1| Cytidine deaminase [Candidatus Arthromitus sp. SFB-co]
gi|380342133|gb|EIA30578.1| Cytidine deaminase [Candidatus Arthromitus sp. SFB-mouse-SU]
Length = 135
Score = 104 bits (259), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 54/113 (47%), Positives = 75/113 (66%), Gaps = 4/113 (3%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
QNL + +++ R+ AY PYSK VGA++L ++ IFTGCN+ENAS G T CAE+TA+ KA+
Sbjct: 7 QNLIDNALKVREKAYVPYSKFPVGASILFKNFEIFTGCNIENASLGATNCAERTAVFKAV 66
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRS 129
SEG +K I ++ F PCG CRQV+AEF+ DI V++ KS +
Sbjct: 67 SEG---YKEIHAVCVVGSFCDFTYPCGICRQVLAEFAFDM-DIPVIVAKSKEN 115
>gi|357235669|ref|ZP_09123012.1| cytidine deaminase [Streptococcus criceti HS-6]
gi|356883651|gb|EHI73851.1| cytidine deaminase [Streptococcus criceti HS-6]
Length = 131
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 51/107 (47%), Positives = 71/107 (66%), Gaps = 3/107 (2%)
Query: 16 EQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKA 75
+ NL L+ +A +Y PYS VGAA+L + +F GCN+ENAS+G+T CAE+TAI KA
Sbjct: 5 DSNLVELARKASLYSYVPYSHFPVGAAVLTKSGQVFQGCNIENASFGLTNCAERTAIFKA 64
Query: 76 ISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVL 122
+SEGQ F I I +N+ +SPCG+CRQV+AEF C + ++
Sbjct: 65 VSEGQRDFSSI---VIYGQTNQPISPCGACRQVMAEFFDLDCPVTLV 108
>gi|341887064|gb|EGT42999.1| hypothetical protein CAEBREN_29459 [Caenorhabditis brenneri]
Length = 166
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/111 (48%), Positives = 72/111 (64%), Gaps = 7/111 (6%)
Query: 13 DPIEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAI 72
D + L +L+ A A+CPYSK VGAALL + I GCNVENASYG TICAE++A+
Sbjct: 8 DISDTELVHLARTALKRAHCPYSKFPVGAALLTESGEIILGCNVENASYGGTICAERSAV 67
Query: 73 SKAISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLI 123
A+S+G TKF+ I+V + + N+ SPCG CRQ + EF D +V+I
Sbjct: 68 VSAVSQGHTKFRAISV---VTELNEPASPCGLCRQFLVEFG----DFKVII 111
>gi|417933855|ref|ZP_12577175.1| cytidine deaminase [Streptococcus mitis bv. 2 str. F0392]
gi|340770425|gb|EGR92940.1| cytidine deaminase [Streptococcus mitis bv. 2 str. F0392]
Length = 129
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 51/115 (44%), Positives = 74/115 (64%), Gaps = 5/115 (4%)
Query: 19 LANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISE 78
L L+I+ AY PYS +GA L+ ++ +I+TG N+ENASY +T C E+TAI KA+SE
Sbjct: 6 LIELAIETSKKAYVPYSHFPIGAVLVAKNGSIYTGVNIENASYPLTNCGERTAIFKAVSE 65
Query: 79 GQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQVGL 133
GQ +F + V + K +SPCG+CRQV+ EF D++V +V D+S V +
Sbjct: 66 GQREFSELIVYG---QTEKPISPCGACRQVMVEFFEQ--DLKVTLVAKDKSTVEM 115
>gi|257870494|ref|ZP_05650147.1| cytidine deaminase [Enterococcus gallinarum EG2]
gi|357049011|ref|ZP_09110240.1| cytidine deaminase [Enterococcus saccharolyticus 30_1]
gi|257804658|gb|EEV33480.1| cytidine deaminase [Enterococcus gallinarum EG2]
gi|355384311|gb|EHG31379.1| cytidine deaminase [Enterococcus saccharolyticus 30_1]
Length = 132
Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 53/117 (45%), Positives = 76/117 (64%), Gaps = 6/117 (5%)
Query: 23 SIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQTK 82
++ A D AY PYSK VGA L+ + TI+ G N+ENAS+G+T CAE+TA KAISEG+
Sbjct: 12 AVAALDKAYVPYSKFPVGACLVTKKGTIYQGINIENASFGLTNCAERTAFFKAISEGEKD 71
Query: 83 FKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQVGLITIDGM 139
F+ + V+ P+ +SPCG+CRQV+ EF P D+ V +V D + T++G+
Sbjct: 72 FQHLVVAGHTPEP---ISPCGACRQVMVEFCQP--DMPVTLV-GDDGIIKETTVEGL 122
>gi|302389167|ref|YP_003824988.1| cytidine deaminase [Thermosediminibacter oceani DSM 16646]
gi|302199795|gb|ADL07365.1| cytidine deaminase [Thermosediminibacter oceani DSM 16646]
Length = 128
Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 55/116 (47%), Positives = 75/116 (64%), Gaps = 6/116 (5%)
Query: 16 EQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKA 75
E+ L ++ A NAY PYS+ +VGA L D + FTGCN+ENASYG+TICAE+ A+ KA
Sbjct: 4 EKRLVEKAVAAMKNAYVPYSRFRVGACALASDGSEFTGCNIENASYGLTICAERVALYKA 63
Query: 76 ISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQV 131
SEG+ +AV+A + + VSPCG+CRQVI E + A V++ D S+V
Sbjct: 64 YSEGKRDIVALAVAAEVEEP---VSPCGACRQVILELAGNAV---VILSNRDGSRV 113
>gi|341885496|gb|EGT41431.1| hypothetical protein CAEBREN_31593 [Caenorhabditis brenneri]
Length = 166
Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/111 (48%), Positives = 72/111 (64%), Gaps = 7/111 (6%)
Query: 13 DPIEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAI 72
D + L +L+ A A+CPYSK VGAALL + I GCNVENASYG TICAE++A+
Sbjct: 8 DISDTELVHLARTALKRAHCPYSKFPVGAALLTESGEIILGCNVENASYGGTICAERSAV 67
Query: 73 SKAISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLI 123
A+S+G TKF+ I+V + + N+ SPCG CRQ + EF D +V+I
Sbjct: 68 VSAVSQGHTKFRAISV---VTELNEPASPCGLCRQFLVEFG----DFKVII 111
>gi|20806970|ref|NP_622141.1| cytidine deaminase [Thermoanaerobacter tengcongensis MB4]
gi|20515450|gb|AAM23745.1| Cytidine deaminase [Thermoanaerobacter tengcongensis MB4]
Length = 135
Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 51/120 (42%), Positives = 79/120 (65%), Gaps = 6/120 (5%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
+ L ++ +AR+NAY PYS +VGA +L +D I+ GCN+ENAS+G+T+CAE+ A+ A
Sbjct: 7 EKLIEIAKEARENAYAPYSNFKVGACVLTEDGNIYKGCNIENASFGLTVCAERVAMFNAY 66
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQVGLITI 136
S G+ K K IAV A D++ VSPCG+CRQV+ E + V+I+ + + ++T+
Sbjct: 67 SGGERKLKAIAVVA---DTDGPVSPCGACRQVMMELGG---EDMVVILSNMKGDHAIMTV 120
>gi|194759636|ref|XP_001962053.1| GF15274 [Drosophila ananassae]
gi|190615750|gb|EDV31274.1| GF15274 [Drosophila ananassae]
Length = 170
Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/123 (43%), Positives = 77/123 (62%), Gaps = 5/123 (4%)
Query: 4 HDIMEFSALDPIEQNLANLSIQARDNAYCPYSKLQVGAALLCQ-DDTIFTGCNVENASYG 62
+++ F +LD Q L + + R AY PYS +VGAA + +D IF GCNVENA++
Sbjct: 15 EEVVTFGSLDTTVQQLLRAASEVRQRAYVPYSGFKVGAAFRAKANDQIFAGCNVENAAFT 74
Query: 63 MTICAEKTAISKAISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVL 122
+ CAE+TA++KA+SEG T+F AV A PD F +PCG CRQ I EF++ DI +
Sbjct: 75 PSSCAERTALAKAVSEGTTEFSVGAVVAFEPDV--FTTPCGVCRQFIREFATD--DIPIY 130
Query: 123 IVK 125
+ +
Sbjct: 131 VAQ 133
>gi|225378189|ref|ZP_03755410.1| hypothetical protein ROSEINA2194_03849 [Roseburia inulinivorans DSM
16841]
gi|225209995|gb|EEG92349.1| hypothetical protein ROSEINA2194_03849 [Roseburia inulinivorans DSM
16841]
Length = 155
Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 49/110 (44%), Positives = 72/110 (65%), Gaps = 4/110 (3%)
Query: 7 MEFSALDPIE-QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTI 65
ME D +E + L +++A+++AY PYS +VGAALL + ++ GCN+ENA Y T
Sbjct: 11 MEKQEFDRMEAEELIKAAMEAKEHAYVPYSHFRVGAALLTKSGKVYQGCNIENAGYSPTN 70
Query: 66 CAEKTAISKAISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSP 115
CAE+TA KA+ EG+ +F IA++ D + ++ PCG CRQV+AEF P
Sbjct: 71 CAERTAFFKAVYEGEREFAAIAING---DGDDYLYPCGVCRQVMAEFCEP 117
>gi|403418891|emb|CCM05591.1| predicted protein [Fibroporia radiculosa]
Length = 185
Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/120 (47%), Positives = 76/120 (63%), Gaps = 6/120 (5%)
Query: 8 EFSALDPIEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICA 67
+ L P+ +++N I A++ AYC YSK +VGAALL I G NVENASYG TICA
Sbjct: 35 HLATLRPLHTHVSN-HILAKEFAYCKYSKFRVGAALLSAGGEIIKGANVENASYGGTICA 93
Query: 68 EKTAISKAISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSD 127
E+TAI KA+SEG F +AV + D + +SPCG CRQV+ EF + D+ + +V D
Sbjct: 94 ERTAIVKAVSEGTRAFIGLAV---VTDVSSPISPCGMCRQVLREFCT--LDMPIYMVPGD 148
>gi|55820858|ref|YP_139300.1| cytidine deaminase [Streptococcus thermophilus LMG 18311]
gi|55822774|ref|YP_141215.1| cytidine deaminase [Streptococcus thermophilus CNRZ1066]
gi|55736843|gb|AAV60485.1| cytidine deaminase [Streptococcus thermophilus LMG 18311]
gi|55738759|gb|AAV62400.1| cytidine deaminase [Streptococcus thermophilus CNRZ1066]
Length = 114
Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 48/84 (57%), Positives = 62/84 (73%), Gaps = 3/84 (3%)
Query: 29 NAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQTKFKRIAV 88
NAY PYS +VGAALL D ++ GCN+ENAS+G+T CAE+TAI KA+SEG F+ I V
Sbjct: 23 NAYVPYSHFRVGAALLTNDGQMYKGCNIENASFGLTNCAERTAIFKAVSEGHRDFEMIVV 82
Query: 89 SAILPDSNKFVSPCGSCRQVIAEF 112
D+ + +SPCG+CRQV+AEF
Sbjct: 83 YG---DTEQPISPCGACRQVMAEF 103
>gi|389843248|ref|YP_006345328.1| cytidine deaminase [Mesotoga prima MesG1.Ag.4.2]
gi|387857994|gb|AFK06085.1| cytidine deaminase [Mesotoga prima MesG1.Ag.4.2]
Length = 130
Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 49/112 (43%), Positives = 75/112 (66%), Gaps = 7/112 (6%)
Query: 16 EQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKA 75
E+ L +I+A++ +Y PYSK VGAALL ++ +F G NVEN+SYG+++CAE++AI A
Sbjct: 7 EKALIQKAIEAKERSYSPYSKFPVGAALLTEEGRVFVGTNVENSSYGLSMCAERSAIVSA 66
Query: 76 ISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSD 127
+S G KF+ I AI+ D + SPCG+CRQ + EF + +V++V +
Sbjct: 67 VSNGYRKFRSI---AIVSDRKEPTSPCGACRQFMVEFG----NFEVILVGEE 111
>gi|225861260|ref|YP_002742769.1| cytidine deaminase [Streptococcus pneumoniae Taiwan19F-14]
gi|298230690|ref|ZP_06964371.1| cytidine deaminase [Streptococcus pneumoniae str. Canada MDR_19F]
gi|298254397|ref|ZP_06977983.1| cytidine deaminase [Streptococcus pneumoniae str. Canada MDR_19A]
gi|298503150|ref|YP_003725090.1| cytidine deaminase [Streptococcus pneumoniae TCH8431/19A]
gi|387788478|ref|YP_006253546.1| cytidine deaminase [Streptococcus pneumoniae ST556]
gi|418082771|ref|ZP_12719972.1| cytidine deaminase [Streptococcus pneumoniae GA44288]
gi|418084916|ref|ZP_12722101.1| cytidine deaminase [Streptococcus pneumoniae GA47281]
gi|418093676|ref|ZP_12730805.1| cytidine deaminase [Streptococcus pneumoniae GA49138]
gi|418100675|ref|ZP_12737762.1| cytidine deaminase [Streptococcus pneumoniae 7286-06]
gi|418118862|ref|ZP_12755819.1| cytidine deaminase [Streptococcus pneumoniae GA18523]
gi|418141435|ref|ZP_12778248.1| cytidine deaminase [Streptococcus pneumoniae GA13455]
gi|418150310|ref|ZP_12787062.1| cytidine deaminase [Streptococcus pneumoniae GA14798]
gi|418157697|ref|ZP_12794413.1| cytidine deaminase [Streptococcus pneumoniae GA16833]
gi|418164178|ref|ZP_12800852.1| cytidine deaminase [Streptococcus pneumoniae GA17371]
gi|418171557|ref|ZP_12808181.1| cytidine deaminase [Streptococcus pneumoniae GA19451]
gi|418196226|ref|ZP_12832704.1| cytidine deaminase [Streptococcus pneumoniae GA47688]
gi|418197669|ref|ZP_12834133.1| cytidine deaminase [Streptococcus pneumoniae GA47778]
gi|418223622|ref|ZP_12850262.1| cytidine deaminase [Streptococcus pneumoniae 5185-06]
gi|419424871|ref|ZP_13965070.1| cytidine deaminase [Streptococcus pneumoniae 7533-05]
gi|419427486|ref|ZP_13967667.1| cytidine deaminase [Streptococcus pneumoniae 5652-06]
gi|419429623|ref|ZP_13969787.1| cytidine deaminase [Streptococcus pneumoniae GA11856]
gi|419435714|ref|ZP_13975808.1| cytidine deaminase [Streptococcus pneumoniae 8190-05]
gi|419444933|ref|ZP_13984948.1| cytidine deaminase [Streptococcus pneumoniae GA19923]
gi|419447077|ref|ZP_13987082.1| cytidine deaminase [Streptococcus pneumoniae 7879-04]
gi|419448486|ref|ZP_13988483.1| cytidine deaminase [Streptococcus pneumoniae 4075-00]
gi|419451187|ref|ZP_13991173.1| cytidine deaminase [Streptococcus pneumoniae EU-NP02]
gi|419501577|ref|ZP_14041263.1| cytidine deaminase [Streptococcus pneumoniae GA47628]
gi|419518640|ref|ZP_14058247.1| cytidine deaminase [Streptococcus pneumoniae GA08825]
gi|419527759|ref|ZP_14067302.1| cytidine deaminase [Streptococcus pneumoniae GA17719]
gi|421287564|ref|ZP_15738329.1| cytidine deaminase [Streptococcus pneumoniae GA58771]
gi|225727919|gb|ACO23770.1| cytidine deaminase [Streptococcus pneumoniae Taiwan19F-14]
gi|298238745|gb|ADI69876.1| cytidine deaminase [Streptococcus pneumoniae TCH8431/19A]
gi|353756684|gb|EHD37283.1| cytidine deaminase [Streptococcus pneumoniae GA44288]
gi|353759430|gb|EHD40015.1| cytidine deaminase [Streptococcus pneumoniae GA47281]
gi|353765552|gb|EHD46094.1| cytidine deaminase [Streptococcus pneumoniae GA49138]
gi|353772809|gb|EHD53311.1| cytidine deaminase [Streptococcus pneumoniae 7286-06]
gi|353790814|gb|EHD71195.1| cytidine deaminase [Streptococcus pneumoniae GA18523]
gi|353805686|gb|EHD85960.1| cytidine deaminase [Streptococcus pneumoniae GA13455]
gi|353816076|gb|EHD96286.1| cytidine deaminase [Streptococcus pneumoniae GA14798]
gi|353824145|gb|EHE04319.1| cytidine deaminase [Streptococcus pneumoniae GA16833]
gi|353832505|gb|EHE12623.1| cytidine deaminase [Streptococcus pneumoniae GA17371]
gi|353835294|gb|EHE15388.1| cytidine deaminase [Streptococcus pneumoniae GA19451]
gi|353860844|gb|EHE40784.1| cytidine deaminase [Streptococcus pneumoniae GA47688]
gi|353864420|gb|EHE44336.1| cytidine deaminase [Streptococcus pneumoniae GA47778]
gi|353878420|gb|EHE58250.1| cytidine deaminase [Streptococcus pneumoniae 5185-06]
gi|379138220|gb|AFC95011.1| cytidine deaminase [Streptococcus pneumoniae ST556]
gi|379549801|gb|EHZ14903.1| cytidine deaminase [Streptococcus pneumoniae GA11856]
gi|379565912|gb|EHZ30903.1| cytidine deaminase [Streptococcus pneumoniae GA17719]
gi|379572626|gb|EHZ37583.1| cytidine deaminase [Streptococcus pneumoniae GA19923]
gi|379601938|gb|EHZ66710.1| cytidine deaminase [Streptococcus pneumoniae GA47628]
gi|379614617|gb|EHZ79327.1| cytidine deaminase [Streptococcus pneumoniae 7879-04]
gi|379616250|gb|EHZ80949.1| cytidine deaminase [Streptococcus pneumoniae 8190-05]
gi|379617679|gb|EHZ82359.1| cytidine deaminase [Streptococcus pneumoniae 5652-06]
gi|379620200|gb|EHZ84859.1| cytidine deaminase [Streptococcus pneumoniae 7533-05]
gi|379622892|gb|EHZ87526.1| cytidine deaminase [Streptococcus pneumoniae EU-NP02]
gi|379623544|gb|EHZ88177.1| cytidine deaminase [Streptococcus pneumoniae 4075-00]
gi|379641619|gb|EIA06154.1| cytidine deaminase [Streptococcus pneumoniae GA08825]
gi|395888176|gb|EJG99188.1| cytidine deaminase [Streptococcus pneumoniae GA58771]
Length = 129
Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 50/116 (43%), Positives = 74/116 (63%), Gaps = 5/116 (4%)
Query: 18 NLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAIS 77
L L+I+ +AY PYS +GA L+ +D +++TG N+ENASY +T C E+TA+ KAIS
Sbjct: 5 ELIELAIETSKHAYVPYSHFPIGAVLVAKDGSVYTGVNIENASYPLTNCGERTAVFKAIS 64
Query: 78 EGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQVGL 133
EGQ +F + V + K + PCG+CRQV+ EF D++V +V D+S V +
Sbjct: 65 EGQREFSELIVYG---QTEKPILPCGACRQVMVEFFEQ--DLKVTLVAKDKSTVEM 115
>gi|229918109|ref|YP_002886755.1| cytidine deaminase [Exiguobacterium sp. AT1b]
gi|229469538|gb|ACQ71310.1| cytidine deaminase [Exiguobacterium sp. AT1b]
Length = 135
Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 50/97 (51%), Positives = 67/97 (69%), Gaps = 3/97 (3%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
Q L + +I+AR AY PYSK VGA ++ TGCNVENASYG+++CAE+TAI KA+
Sbjct: 8 QELVHKAIEARKRAYTPYSKFNVGAVVIDTSGNEITGCNVENASYGLSMCAERTAIFKAV 67
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFS 113
SEG + + V + D+ +SPCG+CRQVIAEF+
Sbjct: 68 SEGSDAIETVVV---VGDTEGPISPCGACRQVIAEFA 101
>gi|392961828|ref|ZP_10327282.1| cytidine deaminase [Pelosinus fermentans DSM 17108]
gi|421055741|ref|ZP_15518703.1| cytidine deaminase [Pelosinus fermentans B4]
gi|421059027|ref|ZP_15521659.1| cytidine deaminase [Pelosinus fermentans B3]
gi|421067104|ref|ZP_15528618.1| cytidine deaminase [Pelosinus fermentans A12]
gi|421072473|ref|ZP_15533582.1| cytidine deaminase [Pelosinus fermentans A11]
gi|392439506|gb|EIW17217.1| cytidine deaminase [Pelosinus fermentans B4]
gi|392445673|gb|EIW22984.1| cytidine deaminase [Pelosinus fermentans A11]
gi|392450842|gb|EIW27851.1| cytidine deaminase [Pelosinus fermentans A12]
gi|392453395|gb|EIW30276.1| cytidine deaminase [Pelosinus fermentans DSM 17108]
gi|392459708|gb|EIW36093.1| cytidine deaminase [Pelosinus fermentans B3]
Length = 134
Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 50/96 (52%), Positives = 69/96 (71%), Gaps = 3/96 (3%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
+ L + R+ AY PYS +VGAA+L ++ I+TGCNVENASYG++ CAE+TAI KA+
Sbjct: 2 KKLIQAAKSGRECAYVPYSNFKVGAAVLTKNGKIYTGCNVENASYGLSNCAERTAIFKAV 61
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEF 112
SEG + I AI+ D+ K V+PCG+CRQV++EF
Sbjct: 62 SEGHQELTAI---AIVADTVKPVAPCGACRQVMSEF 94
>gi|187934737|ref|YP_001887156.1| cytidine deaminase [Clostridium botulinum B str. Eklund 17B]
gi|187722890|gb|ACD24111.1| cytidine deaminase [Clostridium botulinum B str. Eklund 17B]
Length = 135
Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 48/115 (41%), Positives = 75/115 (65%), Gaps = 5/115 (4%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
+ L ++++ R+ AY PYS +VGAA+L ++ GCN+ENAS+G T CAE+TAI +
Sbjct: 4 KELIKIALKYREKAYSPYSNFKVGAAVLFDSGKVYGGCNIENASFGATNCAERTAIFTGV 63
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQV 131
+EG+TK IA+ L ++ PCG CRQVI+EF P +++V++ KS+ +
Sbjct: 64 AEGETKINAIAIVGSLEEN---TYPCGICRQVISEFGGP--EVKVILAKSEEDYI 113
>gi|353243894|emb|CCA75376.1| related to cytidine deaminase [Piriformospora indica DSM 11827]
Length = 153
Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 52/94 (55%), Positives = 64/94 (68%), Gaps = 3/94 (3%)
Query: 19 LANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISE 78
L +I+A+ AY PYSK +VGAALL D +I G N+ENASYG TICAE+TAI KA+SE
Sbjct: 11 LIQAAIEAKQGAYAPYSKFRVGAALLASDGSIIKGSNIENASYGGTICAERTAIVKAVSE 70
Query: 79 GQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEF 112
G F +AV+ D +SPCG CRQV+ EF
Sbjct: 71 GTRSFIGLAVTT---DVAATISPCGICRQVLREF 101
>gi|402833777|ref|ZP_10882389.1| cytidine deaminase [Selenomonas sp. CM52]
gi|402279941|gb|EJU28716.1| cytidine deaminase [Selenomonas sp. CM52]
Length = 129
Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 52/98 (53%), Positives = 67/98 (68%), Gaps = 3/98 (3%)
Query: 16 EQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKA 75
+++L L+ +AR +AY PYS VGAA L D +F GCN+ENASYG+T CAE+TAI A
Sbjct: 3 DESLIELAKKARAHAYVPYSGFAVGAAALAPDGRVFLGCNIENASYGLTNCAERTAIFSA 62
Query: 76 ISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFS 113
++ G +F +AV A D SPCG+CRQVIAEFS
Sbjct: 63 VAAGVQRFAALAVVA---DGELPCSPCGACRQVIAEFS 97
>gi|284047991|ref|YP_003398330.1| cytidine deaminase [Acidaminococcus fermentans DSM 20731]
gi|283952212|gb|ADB47015.1| cytidine deaminase [Acidaminococcus fermentans DSM 20731]
Length = 128
Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 50/101 (49%), Positives = 68/101 (67%), Gaps = 3/101 (2%)
Query: 15 IEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISK 74
+++ L + R+++Y PYS+ VGAA+ D IFTGCNVENASYG+T+CAE+ AI
Sbjct: 5 LDRELFEAACAVREHSYSPYSRFAVGAAVRAADGRIFTGCNVENASYGLTLCAERCAIFA 64
Query: 75 AISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSP 115
A+ EG +F + V+A P VSPCG+CRQV+AEF P
Sbjct: 65 AVKEGVREFAALCVTADTPGP---VSPCGACRQVMAEFRIP 102
>gi|427413732|ref|ZP_18903923.1| cytidine deaminase [Veillonella ratti ACS-216-V-Col6b]
gi|425715055|gb|EKU78049.1| cytidine deaminase [Veillonella ratti ACS-216-V-Col6b]
Length = 131
Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/126 (45%), Positives = 81/126 (64%), Gaps = 8/126 (6%)
Query: 12 LDPIEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTA 71
++ +Q L + +A ++Y PYS VGAALL ++ T+ TGCNVENASYG+T+CAE+ A
Sbjct: 1 MEAWQQKLIEAAKEAALHSYSPYSNFPVGAALLSENGTVITGCNVENASYGLTMCAERGA 60
Query: 72 ISKAISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQV 131
I AI++G T FK IAV + SN + PCG+CRQV+ EF DI + ++ + QV
Sbjct: 61 IQTAIAKGYTSFKAIAVVGL--KSNPCM-PCGACRQVMLEF-----DIPQIFLEDEAGQV 112
Query: 132 GLITID 137
T+D
Sbjct: 113 ISYTMD 118
>gi|125973583|ref|YP_001037493.1| cytidine deaminase [Clostridium thermocellum ATCC 27405]
gi|256003402|ref|ZP_05428393.1| cytidine deaminase [Clostridium thermocellum DSM 2360]
gi|281417788|ref|ZP_06248808.1| cytidine deaminase [Clostridium thermocellum JW20]
gi|385778495|ref|YP_005687660.1| cytidine deaminase [Clostridium thermocellum DSM 1313]
gi|419723678|ref|ZP_14250793.1| cytidine deaminase [Clostridium thermocellum AD2]
gi|419724497|ref|ZP_14251559.1| cytidine deaminase [Clostridium thermocellum YS]
gi|125713808|gb|ABN52300.1| cytidine deaminase [Clostridium thermocellum ATCC 27405]
gi|255992692|gb|EEU02783.1| cytidine deaminase [Clostridium thermocellum DSM 2360]
gi|281409190|gb|EFB39448.1| cytidine deaminase [Clostridium thermocellum JW20]
gi|316940175|gb|ADU74209.1| cytidine deaminase [Clostridium thermocellum DSM 1313]
gi|380772044|gb|EIC05902.1| cytidine deaminase [Clostridium thermocellum YS]
gi|380780360|gb|EIC10043.1| cytidine deaminase [Clostridium thermocellum AD2]
Length = 128
Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 47/97 (48%), Positives = 69/97 (71%), Gaps = 3/97 (3%)
Query: 16 EQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKA 75
++ L ++ + N+Y PYSK +VGAA+L + +FTG N+ENAS+G T+CAE+TA+ KA
Sbjct: 3 DRKLLAMAEDIKKNSYSPYSKFRVGAAVLAKSGKVFTGVNIENASFGATVCAERTAVFKA 62
Query: 76 ISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEF 112
+SEG+ + IA AI DS+++ PCG CRQV+ EF
Sbjct: 63 VSEGE---REIAAVAISSDSDEYTFPCGICRQVLREF 96
>gi|347542287|ref|YP_004856923.1| cytidine deaminase [Candidatus Arthromitus sp. SFB-rat-Yit]
gi|346985322|dbj|BAK80997.1| cytidine deaminase [Candidatus Arthromitus sp. SFB-rat-Yit]
Length = 135
Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 52/110 (47%), Positives = 75/110 (68%), Gaps = 4/110 (3%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
Q+L S++ R+ AY PYSK VG+++L ++ IFTGCNVENAS+G + CAE+TAI KA+
Sbjct: 7 QDLIGKSLEVREKAYVPYSKFPVGSSVLFENSKIFTGCNVENASFGASNCAERTAIFKAV 66
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKS 126
SEG +++I ++ N F PCG CRQV++EF +I V+I K+
Sbjct: 67 SEG---YRKIYALCVVGSLNDFTYPCGICRQVLSEFVFDM-NIPVIIAKN 112
>gi|315426274|dbj|BAJ47916.1| cytidine deaminase [Candidatus Caldiarchaeum subterraneum]
gi|343485083|dbj|BAJ50737.1| cytidine deaminase [Candidatus Caldiarchaeum subterraneum]
Length = 132
Score = 103 bits (257), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 51/97 (52%), Positives = 68/97 (70%), Gaps = 7/97 (7%)
Query: 19 LANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISE 78
L + +A N+Y PYS+ +VGAALL D + TGCNVENASYG+++CAE+TA+ KA+S+
Sbjct: 6 LLEYAFKALKNSYAPYSRFRVGAALLLDDGEVVTGCNVENASYGLSMCAERTAVFKAVSQ 65
Query: 79 GQTKFKRIAV--SAILPDSNKFVSPCGSCRQVIAEFS 113
G KF IAV S + P V PCG+CRQV+ EF+
Sbjct: 66 GVKKFDAIAVVSSKVNP-----VYPCGACRQVLREFN 97
>gi|198437561|ref|XP_002124294.1| PREDICTED: similar to Cytidine deaminase [Ciona intestinalis]
Length = 139
Score = 103 bits (257), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 46/98 (46%), Positives = 69/98 (70%), Gaps = 3/98 (3%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
+ L L+++A+ AYCPYSK QVGAA++ ++ +FTGCNVENA Y + +CAE+TAI KA+
Sbjct: 12 EALIALAVEAKQRAYCPYSKFQVGAAVVVENGDVFTGCNVENACYPVGVCAERTAICKAV 71
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSS 114
SEG +++ + A+ +++ PCG CRQ I EF +
Sbjct: 72 SEGH---RKVEILALTSNADTMTYPCGLCRQTIREFGT 106
>gi|380801023|gb|AFE72387.1| cytidine deaminase, partial [Macaca mulatta]
Length = 116
Score = 103 bits (257), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 52/100 (52%), Positives = 68/100 (68%), Gaps = 5/100 (5%)
Query: 32 CPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQTKFKRIAVSAI 91
CPYS VGAALL Q+ IF GCN+ENA Y + ICAE+TAI KA+SEG FK IA+++
Sbjct: 1 CPYSHFPVGAALLTQEGRIFKGCNIENACYPLGICAERTAIQKAVSEGYKDFKAIAIASD 60
Query: 92 LPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQV 131
+ D F+SPCG+CRQV+ EF + + V + K D + V
Sbjct: 61 MQDD--FISPCGACRQVMREFGT---NWPVYMTKPDGTYV 95
>gi|410920433|ref|XP_003973688.1| PREDICTED: cytidine deaminase-like [Takifugu rubripes]
Length = 150
Score = 103 bits (257), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 50/111 (45%), Positives = 77/111 (69%), Gaps = 4/111 (3%)
Query: 19 LANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISE 78
L + S + + +++CPYSK +VG+ALL D+ + TGCNVENA + + CAE+ AI+KA+SE
Sbjct: 18 LIDQSHEVKKHSHCPYSKFRVGSALLTADNRVITGCNVENACFYLGFCAERNAIAKAVSE 77
Query: 79 GQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRS 129
G KFK IA++ +++F+SPCG+CRQ + EF + + +V + K D S
Sbjct: 78 GSKKFKAIAIAGN-DMTDQFISPCGACRQYMREFGT---NWRVFLSKPDGS 124
>gi|421074874|ref|ZP_15535895.1| cytidine deaminase [Pelosinus fermentans JBW45]
gi|392527094|gb|EIW50199.1| cytidine deaminase [Pelosinus fermentans JBW45]
Length = 132
Score = 103 bits (257), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 49/98 (50%), Positives = 71/98 (72%), Gaps = 3/98 (3%)
Query: 15 IEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISK 74
+++ L + +AR+ AY P+S +VGAA++ I+ GCNVENAS+G+T CAE+TAI K
Sbjct: 1 MKEKLVQAAREAREYAYVPFSHFKVGAAVVGDSQKIYRGCNVENASFGLTNCAERTAIFK 60
Query: 75 AISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEF 112
AISEG+ K + +AV + D+ VSPCG+CRQV++EF
Sbjct: 61 AISEGEHKIEALAV---IADTEDPVSPCGACRQVLSEF 95
>gi|393233873|gb|EJD41441.1| cytidine deaminase [Auricularia delicata TFB-10046 SS5]
Length = 151
Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 57/132 (43%), Positives = 77/132 (58%), Gaps = 7/132 (5%)
Query: 14 PIEQN--LANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTA 71
P++Q L + AR+ +Y PYSK +VGAALL D I G N+ENASYG TICAE+TA
Sbjct: 4 PVDQRERLIEAAFSAREGSYSPYSKFRVGAALLTPDGQIIKGANIENASYGGTICAERTA 63
Query: 72 ISKAISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQV 131
+ KA+S+G +F +AV + D +SPCG CRQ I EF S + + +V +D S
Sbjct: 64 LVKAVSDGTREFSALAV---VTDVANAISPCGICRQFIREFCS--LSMPIFLVPADYSAT 118
Query: 132 GLITIDGMYLTL 143
G L +
Sbjct: 119 AKTGEKGALLEM 130
>gi|168187764|ref|ZP_02622399.1| cytidine deaminase [Clostridium botulinum C str. Eklund]
gi|169294408|gb|EDS76541.1| cytidine deaminase [Clostridium botulinum C str. Eklund]
Length = 132
Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 48/111 (43%), Positives = 77/111 (69%), Gaps = 5/111 (4%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
+ L +++ R++AY PYS +VGAA++ D I+ GCN+ENASYG T CAE+TAI A+
Sbjct: 4 KELIKTALKYRESAYSPYSNFKVGAAVIMDDGKIYGGCNIENASYGATNCAERTAIFSAV 63
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSD 127
++G K K I A++ D + + +PCG CRQVI+EFS + +++++K++
Sbjct: 64 AQGNKKLKAI---ALVGDLSTYTTPCGICRQVISEFSDE--NTEIILIKNE 109
>gi|365839496|ref|ZP_09380734.1| cytidine deaminase [Anaeroglobus geminatus F0357]
gi|364564586|gb|EHM42344.1| cytidine deaminase [Anaeroglobus geminatus F0357]
Length = 127
Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 50/111 (45%), Positives = 70/111 (63%), Gaps = 8/111 (7%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
+ L + +AR+NAY PYS+ +VGAALL D I+ GCNVEN SYG+T CAE+ A+ A+
Sbjct: 7 ETLVKAAREARENAYAPYSRFKVGAALLGTDGKIYRGCNVENGSYGLTSCAERNAVFNAV 66
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSD 127
+ G F+ +A L + + PCG+CRQV+AEF P V++ K D
Sbjct: 67 AAGCRTFRAVA----LAGTADYTVPCGACRQVLAEFRVPV----VILTKED 109
>gi|254250828|ref|ZP_04944147.1| Cytidine deaminase [Burkholderia cenocepacia PC184]
gi|124879962|gb|EAY67318.1| Cytidine deaminase [Burkholderia cenocepacia PC184]
Length = 129
Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 52/100 (52%), Positives = 71/100 (71%), Gaps = 7/100 (7%)
Query: 26 ARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQT--KF 83
AR+ AY PYS+ +VGAALL +D T+F GCNVENASYG+ CAE+TA+ AI+ G F
Sbjct: 13 ARERAYAPYSRFKVGAALLARDGTVFHGCNVENASYGLCNCAERTALFAAIAAGYRPGDF 72
Query: 84 KRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLI 123
R+AV + D++ ++PCG+CRQVI E P DI+V++
Sbjct: 73 ARLAV---VGDTDGPIAPCGACRQVIIEIGKP--DIEVIL 107
>gi|442805480|ref|YP_007373629.1| cytidine deaminase Cdd [Clostridium stercorarium subsp.
stercorarium DSM 8532]
gi|442741330|gb|AGC69019.1| cytidine deaminase Cdd [Clostridium stercorarium subsp.
stercorarium DSM 8532]
Length = 139
Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 48/96 (50%), Positives = 68/96 (70%), Gaps = 3/96 (3%)
Query: 19 LANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISE 78
L +++A++ AY PYS +VGAA+ ++TGCNVEN+S+G TICAE+TAI+KA+SE
Sbjct: 6 LVRKAMEAKEKAYAPYSGFRVGAAVQTASGRVYTGCNVENSSFGATICAERTAIAKAVSE 65
Query: 79 GQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSS 114
G++K +AVS+ D PCG CRQVI+EF +
Sbjct: 66 GESKIVAVAVSS---DGENITYPCGICRQVISEFGN 98
>gi|107023141|ref|YP_621468.1| cytidine deaminase [Burkholderia cenocepacia AU 1054]
gi|116686619|ref|YP_839866.1| cytidine deaminase [Burkholderia cenocepacia HI2424]
gi|105893330|gb|ABF76495.1| cytidine deaminase [Burkholderia cenocepacia AU 1054]
gi|116652334|gb|ABK12973.1| cytidine deaminase [Burkholderia cenocepacia HI2424]
Length = 129
Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 52/100 (52%), Positives = 71/100 (71%), Gaps = 7/100 (7%)
Query: 26 ARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQT--KF 83
AR+ AY PYS+ +VGAALL +D T+F GCNVENASYG+ CAE+TA+ AI+ G F
Sbjct: 13 ARERAYAPYSRFKVGAALLARDGTVFHGCNVENASYGLCNCAERTALFAAIAAGYRPGDF 72
Query: 84 KRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLI 123
R+AV + D++ ++PCG+CRQVI E P DI+V++
Sbjct: 73 ARLAV---VGDTDGPIAPCGACRQVIIEIGKP--DIEVIL 107
>gi|1813698|gb|AAC47631.1| cytidine deaminase [Brugia malayi]
Length = 133
Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 51/101 (50%), Positives = 70/101 (69%), Gaps = 7/101 (6%)
Query: 26 ARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQTKFKR 85
A D AYCPYSK VGAALL +D I TG NVENASYG TICAE++A+++A++EG +F+
Sbjct: 15 AMDRAYCPYSKFTVGAALLTKDGKIITGGNVENASYGGTICAERSAVTRAVAEGYREFQA 74
Query: 86 IAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKS 126
+AV A + +PCG CRQ + EF D++V+++ S
Sbjct: 75 VAVCATPAEPT---APCGLCRQFLIEFG----DMKVIMISS 108
>gi|330803068|ref|XP_003289532.1| hypothetical protein DICPUDRAFT_153916 [Dictyostelium purpureum]
gi|325080392|gb|EGC33950.1| hypothetical protein DICPUDRAFT_153916 [Dictyostelium purpureum]
Length = 148
Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 52/100 (52%), Positives = 70/100 (70%), Gaps = 6/100 (6%)
Query: 30 AYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQTKFKRIAVS 89
+Y PYSK +VGAALL +D I+TG NVEN+SYG+TICAE+TA +KA+SEG T FK I V
Sbjct: 27 SYSPYSKFRVGAALLGTNDKIYTGVNVENSSYGLTICAERTAYTKAVSEGCTTFKGIIV- 85
Query: 90 AILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRS 129
+ + +F +PCG+CRQ EF + +V+ K DR+
Sbjct: 86 -VSDATERFTTPCGACRQFGVEFG----NFEVVCCKPDRT 120
>gi|170735212|ref|YP_001774326.1| cytidine deaminase [Burkholderia cenocepacia MC0-3]
gi|169821250|gb|ACA95831.1| cytidine deaminase [Burkholderia cenocepacia MC0-3]
Length = 129
Score = 102 bits (255), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 52/100 (52%), Positives = 71/100 (71%), Gaps = 7/100 (7%)
Query: 26 ARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQT--KF 83
AR+ AY PYS+ +VGAALL +D T+F GCNVENASYG+ CAE+TA+ AI+ G F
Sbjct: 13 ARERAYAPYSRFKVGAALLARDGTVFHGCNVENASYGLCNCAERTALFAAIAAGYRPGDF 72
Query: 84 KRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLI 123
R+AV + D++ ++PCG+CRQVI E P DI+V++
Sbjct: 73 ARLAV---VGDTDGPIAPCGACRQVIIEIGKP--DIEVIL 107
>gi|195035193|ref|XP_001989062.1| GH11514 [Drosophila grimshawi]
gi|193905062|gb|EDW03929.1| GH11514 [Drosophila grimshawi]
Length = 168
Score = 102 bits (255), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 57/127 (44%), Positives = 76/127 (59%), Gaps = 5/127 (3%)
Query: 2 VGHDIMEFSALDPIEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDT--IFTGCNVENA 59
V ++E+ LD + L + R AY PYS +VG+A T IFTGCNVENA
Sbjct: 13 VKETVVEYGTLDTANKELLLAAHLVRQRAYAPYSHFKVGSAFRTSPTTNRIFTGCNVENA 72
Query: 60 SYGMTICAEKTAISKAISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDI 119
++ T CAE+TA++KA+SEG +F AV A PD FVSPCG CRQ I EF+ + DI
Sbjct: 73 AFTPTSCAERTALTKAVSEGYQQFAAGAVVAYKPDV--FVSPCGVCRQFIREFAG-STDI 129
Query: 120 QVLIVKS 126
+ I ++
Sbjct: 130 PIYIAQA 136
>gi|449548426|gb|EMD39393.1| hypothetical protein CERSUDRAFT_113031 [Ceriporiopsis subvermispora
B]
Length = 155
Score = 102 bits (255), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 54/114 (47%), Positives = 75/114 (65%), Gaps = 5/114 (4%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
+ L + +I A++ AYC YSK +VGAALL + + G N+ENASYG TICAE+TAI KA+
Sbjct: 12 EKLISAAIHAKEFAYCKYSKFRVGAALLSANGDVIKGANIENASYGGTICAERTAIVKAV 71
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQ 130
SEG F +AV +P + +SPCG CRQV+ EF A ++ V +V +D +
Sbjct: 72 SEGIKSFIGLAVVTDVPSA---ISPCGMCRQVLREFC--ALEMPVYLVPADHQK 120
>gi|218290988|ref|ZP_03495036.1| pyrimidine-nucleoside phosphorylase [Alicyclobacillus
acidocaldarius LAA1]
gi|218239070|gb|EED06274.1| pyrimidine-nucleoside phosphorylase [Alicyclobacillus
acidocaldarius LAA1]
Length = 583
Score = 102 bits (255), Expect = 4e-20, Method: Composition-based stats.
Identities = 50/99 (50%), Positives = 67/99 (67%), Gaps = 1/99 (1%)
Query: 18 NLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAIS 77
+L + +ARD AY PYS VGAAL D + TG NVENASYG+T CAE++A+ +A++
Sbjct: 443 DLMEAAREARDRAYVPYSGFAVGAALELADGRMVTGANVENASYGLTNCAERSAVFRAVA 502
Query: 78 EGQTKFK-RIAVSAILPDSNKFVSPCGSCRQVIAEFSSP 115
EG + I A++ DS + VSPCG+CRQV+AEF P
Sbjct: 503 EGAPGARPEIRAVAVIADSPEPVSPCGACRQVLAEFCRP 541
>gi|294501287|ref|YP_003564987.1| cytidine deaminase [Bacillus megaterium QM B1551]
gi|295706634|ref|YP_003599709.1| cytidine deaminase [Bacillus megaterium DSM 319]
gi|294351224|gb|ADE71553.1| cytidine deaminase [Bacillus megaterium QM B1551]
gi|294804293|gb|ADF41359.1| cytidine deaminase [Bacillus megaterium DSM 319]
Length = 132
Score = 102 bits (255), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 51/109 (46%), Positives = 75/109 (68%), Gaps = 3/109 (2%)
Query: 19 LANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISE 78
L + + +AR+ AY PYSK +VGAALL +D ++ GCN+ENA+Y M CAE+TA+ KA SE
Sbjct: 6 LIDEAKKAREMAYVPYSKFKVGAALLTKDGKVYRGCNIENAAYSMCNCAERTALFKAYSE 65
Query: 79 GQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSD 127
G ++ +AV A D+++ VSPCG+CRQVI+E + + +K+D
Sbjct: 66 GDKEYAALAVVA---DTDRPVSPCGACRQVISELCPKEMKVILTNLKND 111
>gi|312622014|ref|YP_004023627.1| cytidine deaminase [Caldicellulosiruptor kronotskyensis 2002]
gi|312202481|gb|ADQ45808.1| cytidine deaminase [Caldicellulosiruptor kronotskyensis 2002]
Length = 138
Score = 102 bits (255), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 54/123 (43%), Positives = 84/123 (68%), Gaps = 9/123 (7%)
Query: 12 LDPIEQNLA---NLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAE 68
LD +++ A NL+ +A++ AY PYS+ +VGAA++ ++TGCN+ENASY +++CAE
Sbjct: 4 LDRVDEQTAYFLNLAKEAQEKAYAPYSRFRVGAAIVGSSGKVYTGCNIENASYPLSMCAE 63
Query: 69 KTAISKAISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDR 128
+ A+ KAISEG+TK K A+ I P+ N+ +SPCG+CRQV+ E A D + + D
Sbjct: 64 RVALFKAISEGETKIK--ALYIIGPE-NEPISPCGACRQVVFEL---AKDSTIYLSNYDM 117
Query: 129 SQV 131
++V
Sbjct: 118 TKV 120
>gi|222529761|ref|YP_002573643.1| cytidine deaminase [Caldicellulosiruptor bescii DSM 6725]
gi|222456608|gb|ACM60870.1| cytidine deaminase [Caldicellulosiruptor bescii DSM 6725]
Length = 135
Score = 102 bits (255), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 54/121 (44%), Positives = 83/121 (68%), Gaps = 12/121 (9%)
Query: 12 LDPIEQNLA---NLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAE 68
LD +++ A NL+ +A++ AY PYS+ +VGAA++ ++TGCN+ENASY +++CAE
Sbjct: 4 LDRVDEQTAYFLNLAKEAQEKAYAPYSRFRVGAAIVGSSGKVYTGCNIENASYPLSMCAE 63
Query: 69 KTAISKAISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPA------CDIQVL 122
+ A+ KAISEG+TK K A+ I P+ N+ +SPCG+CRQV+ E + + CDI +
Sbjct: 64 RVALFKAISEGETKIK--ALYIIGPE-NEPISPCGACRQVVFELAKDSTIYLSNCDITKV 120
Query: 123 I 123
I
Sbjct: 121 I 121
>gi|294659692|ref|XP_002770628.1| DEHA2G13046p [Debaryomyces hansenii CBS767]
gi|199434161|emb|CAR65962.1| DEHA2G13046p [Debaryomyces hansenii CBS767]
Length = 149
Score = 102 bits (255), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 53/105 (50%), Positives = 67/105 (63%), Gaps = 6/105 (5%)
Query: 26 ARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQTKFKR 85
AR++AYCPYSK +VG L FTG NVENASYG ICAE+ I+KA++EG K K
Sbjct: 25 ARNSAYCPYSKFRVGCVLETSTGKRFTGANVENASYGAGICAERATITKAVTEGHKKLKL 84
Query: 86 IAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQ 130
IA+S DS + +SPCG CRQ I EF ++ V + SD S+
Sbjct: 85 IAISG---DSEEPISPCGICRQFIREFGP---NVPVFMFNSDGSK 123
>gi|295104737|emb|CBL02281.1| cytidine deaminase [Faecalibacterium prausnitzii SL3/3]
Length = 150
Score = 102 bits (255), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 53/113 (46%), Positives = 72/113 (63%), Gaps = 4/113 (3%)
Query: 16 EQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKA 75
+Q L +++ AR+ AY PYS VGAAL D IFTGCNVENA++ T CAE+TA+ KA
Sbjct: 9 KQQLIRMALAAREKAYAPYSDFMVGAALRAADGRIFTGCNVENAAFTPTSCAERTALFKA 68
Query: 76 ISEGQTKFKRIAV--SAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKS 126
++EG T F IAV S + + SPCG CRQ + EF P ++ V++ K+
Sbjct: 69 VAEGVTAFTDIAVVGSRRGEVNRQITSPCGVCRQALFEFGGP--ELNVIMAKT 119
>gi|393214601|gb|EJD00094.1| cytidine deaminase [Fomitiporia mediterranea MF3/22]
Length = 149
Score = 102 bits (255), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 55/123 (44%), Positives = 79/123 (64%), Gaps = 15/123 (12%)
Query: 25 QARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQTKFK 84
+AR+ AYC YS+ +VGAALL + + G NVENASYG TICAE+TA+ KA+SEG +F
Sbjct: 18 EAREFAYCRYSRFRVGAALLSKSGEVIKGANVENASYGGTICAERTALVKAVSEGILEFV 77
Query: 85 RIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKS----------DRSQVGLI 134
+AV+ +P +SPCG CRQ I EF +P ++ VL+V ++S + ++
Sbjct: 78 ALAVTTDVPSP---ISPCGMCRQFIREFCAP--EMPVLMVAGNYVEGSSVDLEKSSIVVM 132
Query: 135 TID 137
T+D
Sbjct: 133 TVD 135
>gi|188588721|ref|YP_001922099.1| cytidine deaminase [Clostridium botulinum E3 str. Alaska E43]
gi|251777744|ref|ZP_04820664.1| cytidine deaminase [Clostridium botulinum E1 str. 'BoNT E Beluga']
gi|188499002|gb|ACD52138.1| cytidine deaminase [Clostridium botulinum E3 str. Alaska E43]
gi|243082059|gb|EES47949.1| cytidine deaminase [Clostridium botulinum E1 str. 'BoNT E Beluga']
Length = 135
Score = 102 bits (255), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 48/111 (43%), Positives = 74/111 (66%), Gaps = 5/111 (4%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
+ L ++++ R+ AY PYS +VGAA+L ++ GCN+ENAS+G T CAE+TAI +
Sbjct: 4 KELIKIALKYREKAYSPYSNFKVGAAVLFDSGKVYGGCNIENASFGATNCAERTAIFTGV 63
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSD 127
+EG+TK IA+ L ++ PCG CRQVI+EF P +++V++ KS+
Sbjct: 64 AEGETKINAIAIVGSLEEN---TYPCGICRQVISEFGGP--EVKVILAKSE 109
>gi|320040327|gb|EFW22260.1| cytidine deaminase [Coccidioides posadasii str. Silveira]
Length = 140
Score = 102 bits (255), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 54/110 (49%), Positives = 71/110 (64%), Gaps = 8/110 (7%)
Query: 16 EQNLANLS---IQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAI 72
E LA LS I A+D AYCPYSK +VGA+LL +D T F G NVENASY + ICAEK
Sbjct: 8 EAELATLSAKAIGAKDVAYCPYSKFRVGASLLAEDGTFFVGANVENASYPVGICAEKCVF 67
Query: 73 SKAISEGQTKFKRIAVSA-ILPDSNKFVSPCGSCRQVIAEFSSPACDIQV 121
A++ G FK +AV++ I+P + SPCGSCRQ + +F P+ + +
Sbjct: 68 GTAVTAGHRSFKAVAVASDIIPGT----SPCGSCRQFMRQFCPPSFPVYM 113
>gi|260888157|ref|ZP_05899420.1| cytidine deaminase [Selenomonas sputigena ATCC 35185]
gi|330840023|ref|YP_004414603.1| cytidine deaminase [Selenomonas sputigena ATCC 35185]
gi|260862186|gb|EEX76686.1| cytidine deaminase [Selenomonas sputigena ATCC 35185]
gi|329747787|gb|AEC01144.1| cytidine deaminase [Selenomonas sputigena ATCC 35185]
Length = 129
Score = 102 bits (255), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 51/98 (52%), Positives = 67/98 (68%), Gaps = 3/98 (3%)
Query: 16 EQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKA 75
+++L L+ +AR +AY PYS VGAA L D +F GCN+ENASYG+T CAE+TAI A
Sbjct: 3 DESLIELAKKARAHAYVPYSGFAVGAAALAPDGRVFLGCNIENASYGLTNCAERTAIFSA 62
Query: 76 ISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFS 113
++ G +F +AV A D SPCG+CRQVIAEF+
Sbjct: 63 VAAGVQRFAALAVVA---DGELPCSPCGACRQVIAEFA 97
>gi|50550903|ref|XP_502924.1| YALI0D17072p [Yarrowia lipolytica]
gi|49648792|emb|CAG81115.1| YALI0D17072p [Yarrowia lipolytica CLIB122]
Length = 149
Score = 102 bits (255), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 54/111 (48%), Positives = 70/111 (63%), Gaps = 6/111 (5%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
+NL + S+ ARD +Y PYSK +VGA LL + G NVENASYG ICAE+ AI++AI
Sbjct: 9 ENLRDKSLSARDFSYSPYSKFRVGAVLLTESGEWIQGANVENASYGGAICAERVAITRAI 68
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSD 127
EG KFK I V++ D + SPCG CRQ I E+S+ DI + + D
Sbjct: 69 MEGHKKFKAIGVAS---DLSVVCSPCGICRQFIREWST---DIPIYLFTKD 113
>gi|160943892|ref|ZP_02091122.1| hypothetical protein FAEPRAM212_01393 [Faecalibacterium prausnitzii
M21/2]
gi|158444568|gb|EDP21572.1| cytidine deaminase [Faecalibacterium prausnitzii M21/2]
Length = 150
Score = 102 bits (255), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 53/113 (46%), Positives = 72/113 (63%), Gaps = 4/113 (3%)
Query: 16 EQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKA 75
+Q L +++ AR+ AY PYS VGAAL D IFTGCNVENA++ T CAE+TA+ KA
Sbjct: 9 KQQLIRMALAAREKAYAPYSDFMVGAALRAADGRIFTGCNVENAAFTPTSCAERTALFKA 68
Query: 76 ISEGQTKFKRIAV--SAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKS 126
++EG T F IAV S + + SPCG CRQ + EF P ++ V++ K+
Sbjct: 69 VAEGVTAFTDIAVVGSRRGEVNRQITSPCGVCRQALFEFGGP--ELNVIMAKT 119
>gi|355681314|ref|ZP_09061884.1| cytidine deaminase [Clostridium citroniae WAL-17108]
gi|354811627|gb|EHE96257.1| cytidine deaminase [Clostridium citroniae WAL-17108]
Length = 146
Score = 102 bits (255), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 49/102 (48%), Positives = 68/102 (66%), Gaps = 2/102 (1%)
Query: 16 EQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKA 75
E L L+ + R+ AY PYS +VGAALL + T++ GCN+ENASYG T CAE+TA KA
Sbjct: 3 ETELIELACKGREQAYTPYSGFRVGAALLTRSGTVYLGCNIENASYGPTNCAERTAFFKA 62
Query: 76 ISEGQTKFKRIAVSAILPD--SNKFVSPCGSCRQVIAEFSSP 115
+SEG+ +F+ IA+ + + + +PCG CRQV+ EF P
Sbjct: 63 VSEGEREFEAIAIVGGPGEGRTGEMCAPCGVCRQVMMEFCDP 104
>gi|392579529|gb|EIW72656.1| hypothetical protein TREMEDRAFT_36845 [Tremella mesenterica DSM
1558]
Length = 161
Score = 102 bits (255), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 51/102 (50%), Positives = 65/102 (63%), Gaps = 3/102 (2%)
Query: 12 LDP-IEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKT 70
LDP I L + + RD AY PYS +VGAALL +D + GCNVENASYG ICAE+T
Sbjct: 4 LDPEILHKLIQAAFEGRDQAYAPYSHFRVGAALLTRDGMMINGCNVENASYGGAICAERT 63
Query: 71 AISKAISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEF 112
A+ K +S G F V++ +P + +SPCG CRQV+ EF
Sbjct: 64 AVVKGVSSGHRDFVACVVASDVPSPS--ISPCGICRQVLREF 103
>gi|346311342|ref|ZP_08853349.1| cytidine deaminase [Collinsella tanakaei YIT 12063]
gi|345901172|gb|EGX70980.1| cytidine deaminase [Collinsella tanakaei YIT 12063]
Length = 138
Score = 102 bits (255), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 52/101 (51%), Positives = 67/101 (66%), Gaps = 4/101 (3%)
Query: 19 LANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISE 78
L +I+AR+ AYCPYS VGAALLC D T++ GCN+ENA+Y CAE+TAI +A+ +
Sbjct: 6 LVQAAIRAREKAYCPYSNFAVGAALLCADGTVYGGCNIENAAYSPGNCAERTAIFRAVFD 65
Query: 79 GQTKFKRIAV---SAILPDSNKFVSPCGSCRQVIAEFSSPA 116
GQ F IA+ A P S + +PCG CRQV+ EF PA
Sbjct: 66 GQRDFTSIAIVGGPAGQPVS-ELCAPCGVCRQVMMEFCDPA 105
>gi|390596914|gb|EIN06315.1| cytidine deaminase [Punctularia strigosozonata HHB-11173 SS5]
Length = 158
Score = 102 bits (255), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 57/121 (47%), Positives = 76/121 (62%), Gaps = 6/121 (4%)
Query: 8 EFSALDPIE-QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTIC 66
+ +AL ++ + L S +A+ AYC YS +VGAALL I G N+ENASYG TIC
Sbjct: 4 QIAALSQVDRERLIKASFEAKAMAYCRYSNFRVGAALLTSKGEIIKGANIENASYGGTIC 63
Query: 67 AEKTAISKAISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKS 126
AE+TA+ KA+SEG F +AV + D +SPCG CRQVI EF A D+ +L+V +
Sbjct: 64 AERTALVKAVSEGMRDFVALAV---VTDVKSTISPCGMCRQVIREFC--AMDMPILLVPA 118
Query: 127 D 127
D
Sbjct: 119 D 119
>gi|386346652|ref|YP_006044901.1| cytidine deaminase [Spirochaeta thermophila DSM 6578]
gi|339411619|gb|AEJ61184.1| cytidine deaminase [Spirochaeta thermophila DSM 6578]
Length = 140
Score = 102 bits (255), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 46/90 (51%), Positives = 63/90 (70%), Gaps = 2/90 (2%)
Query: 30 AYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQTKFKRIAVS 89
AY PYS + VGAALLC D TI G N+EN SYG+T+CAE+TA+ +A+ EG+ F +A+
Sbjct: 22 AYAPYSHIHVGAALLCDDGTIVQGANMENRSYGLTVCAERTALFRALLEGRRAFTALAIY 81
Query: 90 AILPDSNKFVSPCGSCRQVIAEFSSPACDI 119
+ PD ++PCG+CRQV++EF P I
Sbjct: 82 S--PDVPTLLTPCGACRQVLSEFLPPETPI 109
>gi|296133912|ref|YP_003641159.1| cytidine deaminase [Thermincola potens JR]
gi|296032490|gb|ADG83258.1| cytidine deaminase [Thermincola potens JR]
Length = 141
Score = 102 bits (255), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 53/118 (44%), Positives = 79/118 (66%), Gaps = 7/118 (5%)
Query: 19 LANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISE 78
L +++ ++ AY PYSK +VGAALL D ++TGCNVENAS+G+T CAE+ A+ +AI++
Sbjct: 14 LVKHALEVKERAYAPYSKFRVGAALLTGDGRVYTGCNVENASFGLTSCAERNAVFRAIAD 73
Query: 79 GQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQVGLITI 136
FK I AI+ D++ + PCG+CRQV+ EFS D+ V I+ +++ L TI
Sbjct: 74 DCRGFKAI---AIVSDADDYCIPCGACRQVLVEFSR---DLTV-IMANNKGDYRLTTI 124
>gi|363891335|ref|ZP_09318514.1| cytidine deaminase [Eubacteriaceae bacterium CM2]
gi|361965392|gb|EHL18374.1| cytidine deaminase [Eubacteriaceae bacterium CM2]
Length = 140
Score = 102 bits (254), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 53/116 (45%), Positives = 72/116 (62%), Gaps = 8/116 (6%)
Query: 19 LANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISE 78
L L+ +AR+NAY PYS +VGAALL ++ I+ GCNVENA+Y T CAE+TA KA+SE
Sbjct: 6 LIRLAFKARENAYTPYSNFKVGAALLAKNGKIYQGCNVENATYSPTNCAERTAFFKAVSE 65
Query: 79 GQTKFKRIAVSAILPDSN----KFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQ 130
G +F IA+ L + ++ PCG CRQV+ EF CD I+ +S+
Sbjct: 66 GVREFDAIAIVGGLETTKEGEFEYTPPCGVCRQVMMEF----CDYNNFIIILAKSE 117
>gi|313113496|ref|ZP_07799085.1| cytidine deaminase [Faecalibacterium cf. prausnitzii KLE1255]
gi|310624223|gb|EFQ07589.1| cytidine deaminase [Faecalibacterium cf. prausnitzii KLE1255]
Length = 148
Score = 102 bits (254), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 52/113 (46%), Positives = 74/113 (65%), Gaps = 4/113 (3%)
Query: 16 EQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKA 75
++ L +++ AR+ AY PYS VGAAL +D IFTGCNVENA++ T CAE+TA+ KA
Sbjct: 9 KKELIRMALAAREKAYVPYSDFMVGAALRAKDGRIFTGCNVENAAFTPTSCAERTALFKA 68
Query: 76 ISEGQTKFKRIAV--SAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKS 126
++EG T+F IAV S + + SPCG CRQ + EF P ++ V++ K+
Sbjct: 69 VAEGVTEFTDIAVVGSRRGEVNEQITSPCGVCRQALFEFGGP--ELNVIMAKT 119
>gi|323528528|ref|YP_004230680.1| cytidine deaminase [Burkholderia sp. CCGE1001]
gi|407709376|ref|YP_006793240.1| cytidine deaminase [Burkholderia phenoliruptrix BR3459a]
gi|323385530|gb|ADX57620.1| cytidine deaminase [Burkholderia sp. CCGE1001]
gi|407238059|gb|AFT88257.1| cytidine deaminase [Burkholderia phenoliruptrix BR3459a]
Length = 129
Score = 102 bits (254), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 52/112 (46%), Positives = 73/112 (65%), Gaps = 2/112 (1%)
Query: 15 IEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISK 74
+EQ LA + AR+ AY PYSK +VGAALL D +F GCNVENASYG+ CAE+TA
Sbjct: 3 MEQLLARAGV-AREKAYAPYSKFKVGAALLTHDGRVFDGCNVENASYGLCNCAERTAFFS 61
Query: 75 AISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKS 126
AI+ G + + A A++ D++ ++PCG+CRQV+ E P I++ +K
Sbjct: 62 AIAAGYQR-DQFAALAVIGDTDGPIAPCGACRQVMIELGGPDLPIRLGNLKG 112
>gi|160931536|ref|ZP_02078931.1| hypothetical protein CLOLEP_00368 [Clostridium leptum DSM 753]
gi|156869407|gb|EDO62779.1| cytidine deaminase [Clostridium leptum DSM 753]
Length = 138
Score = 102 bits (254), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 49/101 (48%), Positives = 66/101 (65%), Gaps = 2/101 (1%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
+ L L+++AR NAY PYS VGAALL ++ ++TGCN+ENA++ T C E+TA KA+
Sbjct: 4 ERLGRLALEARKNAYAPYSHFAVGAALLTKNGKVYTGCNIENAAFSPTSCGERTAFFKAV 63
Query: 77 SEGQTKFKRIAVSAILPDSN--KFVSPCGSCRQVIAEFSSP 115
SEG+ +F IAV+ N PCG CRQV+AEF P
Sbjct: 64 SEGEREFLAIAVAGGRTGENPENPCPPCGVCRQVMAEFCDP 104
>gi|17540514|ref|NP_501221.1| Protein CDD-2 [Caenorhabditis elegans]
gi|351062473|emb|CCD70446.1| Protein CDD-2 [Caenorhabditis elegans]
Length = 166
Score = 102 bits (254), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 57/117 (48%), Positives = 75/117 (64%), Gaps = 8/117 (6%)
Query: 19 LANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISE 78
L +L+ A A+CPYSK VGAALL + I GCNVENASYG TICAE++AI A+S+
Sbjct: 15 LVHLARAAMKRAHCPYSKFPVGAALLTESGEIVQGCNVENASYGGTICAERSAIVSAVSQ 74
Query: 79 GQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQVGLIT 135
G TKF+ IAV L + SPCG CRQ + EF D +V++ + +++ LIT
Sbjct: 75 GYTKFRAIAVVTELSEP---ASPCGLCRQFLVEFG----DYKVVVGTASNNKI-LIT 123
>gi|268536108|ref|XP_002633189.1| C. briggsae CBR-CDD-2 protein [Caenorhabditis briggsae]
Length = 166
Score = 102 bits (254), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 58/119 (48%), Positives = 73/119 (61%), Gaps = 9/119 (7%)
Query: 7 MEFSAL--DPIEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMT 64
M SAL D + L L+ A A+CPYSK VGAALL + I GCNVENASYG T
Sbjct: 1 MAASALPQDISDAELVGLARTAMKRAHCPYSKFPVGAALLTESGDIILGCNVENASYGGT 60
Query: 65 ICAEKTAISKAISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLI 123
ICAE++A+ A+S+G TKF+ I+V L + SPCG CRQ + EF D +V+I
Sbjct: 61 ICAERSAVVSAVSQGHTKFRAISVVTELSEP---ASPCGLCRQFLVEFG----DFKVII 112
>gi|170101060|ref|XP_001881747.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164643102|gb|EDR07355.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 179
Score = 102 bits (254), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 59/128 (46%), Positives = 75/128 (58%), Gaps = 22/128 (17%)
Query: 23 SIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQTK 82
+ +A+ +Y PYSK VGAALL +D +I G NVENASYG TICAE+TAI KA+SEG +
Sbjct: 17 AFEAKKYSYSPYSKFPVGAALLAKDGSIIKGANVENASYGGTICAERTAIVKAVSEGIRE 76
Query: 83 FKRIAVSAILPDS------NKF--------------VSPCGSCRQVIAEFSSPACDIQVL 122
F +AV +P + N F +SPCG CRQVI EF S D+ +L
Sbjct: 77 FIGLAVVTQVPPTPSSPTNNLFSPLFLAHTRNVGSAISPCGICRQVIREFCS--LDMPIL 134
Query: 123 IVKSDRSQ 130
+V D Q
Sbjct: 135 LVPGDYPQ 142
>gi|363890256|ref|ZP_09317594.1| cytidine deaminase [Eubacteriaceae bacterium CM5]
gi|361965700|gb|EHL18671.1| cytidine deaminase [Eubacteriaceae bacterium CM5]
Length = 140
Score = 102 bits (254), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 53/117 (45%), Positives = 74/117 (63%), Gaps = 11/117 (9%)
Query: 19 LANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISE 78
L L+ +AR+NAY PYS +VGAALL ++ I+ GCN+ENA+Y T CAE+TA KA+SE
Sbjct: 6 LIRLAFKARENAYTPYSNFKVGAALLAKNGKIYQGCNIENATYSPTNCAERTAFFKAVSE 65
Query: 79 GQTKFKRIAVSAILPDSN----KFVSPCGSCRQVIAEFSSPACD---IQVLIVKSDR 128
G +F IA+ L + ++ PCG CRQV+ EF CD V++ KS++
Sbjct: 66 GVREFNAIAIVGGLKTTKNGEFEYTPPCGVCRQVMMEF----CDYDNFTVILAKSEQ 118
>gi|134109233|ref|XP_776731.1| hypothetical protein CNBC2220 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50259411|gb|EAL22084.1| hypothetical protein CNBC2220 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 164
Score = 102 bits (254), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 51/97 (52%), Positives = 65/97 (67%), Gaps = 2/97 (2%)
Query: 18 NLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAIS 77
L + ++ RD AY PYSK +VGAALL D ++ GCNVENASYG ICAE+TA+ KA+S
Sbjct: 15 KLFSTAVIYRDRAYAPYSKFRVGAALLGADGRLYGGCNVENASYGAGICAERTAVVKAVS 74
Query: 78 EGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSS 114
E Q F +AV + +P + SPCG CRQ + EF S
Sbjct: 75 ESQQSFLAVAVVSDIPSPS--CSPCGICRQFLREFVS 109
>gi|299744530|ref|XP_001831097.2| cytidine deaminase [Coprinopsis cinerea okayama7#130]
gi|298406169|gb|EAU90719.2| cytidine deaminase [Coprinopsis cinerea okayama7#130]
Length = 158
Score = 102 bits (254), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 53/111 (47%), Positives = 71/111 (63%), Gaps = 5/111 (4%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
+ L + A+ +Y PYS+ VGAALL + I G N+ENASYG TICAE+TAI KA+
Sbjct: 8 KKLIEGAFAAKKGSYSPYSRFPVGAALLTAEGEIVKGANIENASYGGTICAERTAIVKAV 67
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSD 127
SEG +F +AV +P S +SPCG CRQV+ EF A ++ +L+V D
Sbjct: 68 SEGSRRFVGLAVVTNVPSS---ISPCGMCRQVLREFC--ANEMPILLVPGD 113
>gi|363893612|ref|ZP_09320710.1| cytidine deaminase [Eubacteriaceae bacterium ACC19a]
gi|361963916|gb|EHL16982.1| cytidine deaminase [Eubacteriaceae bacterium ACC19a]
Length = 140
Score = 102 bits (254), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 53/117 (45%), Positives = 74/117 (63%), Gaps = 11/117 (9%)
Query: 19 LANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISE 78
L L+ +AR+NAY PYS +VGAALL ++ I+ GCN+ENA+Y T CAE+TA KA+SE
Sbjct: 6 LIRLAFKARENAYTPYSNFKVGAALLAKNGKIYQGCNIENATYSPTNCAERTAFFKAVSE 65
Query: 79 GQTKFKRIAVSAILPDSN----KFVSPCGSCRQVIAEFSSPACD---IQVLIVKSDR 128
G +F IA+ L + ++ PCG CRQV+ EF CD V++ KS++
Sbjct: 66 GVREFNAIAIVGGLETTKNGEFEYTPPCGVCRQVMMEF----CDYDNFTVILAKSEQ 118
>gi|332298295|ref|YP_004440217.1| cytidine deaminase [Treponema brennaborense DSM 12168]
gi|332181398|gb|AEE17086.1| cytidine deaminase [Treponema brennaborense DSM 12168]
Length = 135
Score = 102 bits (254), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 49/118 (41%), Positives = 74/118 (62%), Gaps = 5/118 (4%)
Query: 23 SIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQTK 82
+++A + +Y PYS VGAALL D T+ TG N+EN S+G+T CAE+TA+ AI+ G T
Sbjct: 13 ALRAAEKSYSPYSHFPVGAALLLSDGTVVTGANIENRSFGLTNCAERTAVFTAIAAGHTT 72
Query: 83 FKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQVGLITIDGMY 140
FK +A++ P S+ V PCG+CRQV+ EF+ P + S+ ++ T+ +Y
Sbjct: 73 FKALAIAT--PRSDYPVGPCGACRQVLTEFAPPETPV---FFGSNEDELVSTTLGALY 125
>gi|258645787|ref|ZP_05733256.1| cytidine deaminase [Dialister invisus DSM 15470]
gi|260403158|gb|EEW96705.1| cytidine deaminase [Dialister invisus DSM 15470]
Length = 138
Score = 102 bits (254), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 60/126 (47%), Positives = 71/126 (56%), Gaps = 11/126 (8%)
Query: 27 RDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQTKFKRI 86
R NAY PYS VGAA+L +D IFTGCNVEN SY +CAE+ AI A++ G T F+ I
Sbjct: 17 RKNAYVPYSGYPVGAAVLGEDGNIFTGCNVENVSYPAGMCAERNAIGSAVTAGYTSFQGI 76
Query: 87 AVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQVGLITIDGMYLTLHCC 146
AV+ F PCG CRQVIAEF P V+IV D + DG L H
Sbjct: 77 AVAG---SDKGFTMPCGICRQVIAEFHIP-----VVIVAKDEDHYKI--FDGSKLLPH-A 125
Query: 147 WERGNL 152
+E G L
Sbjct: 126 FEEGCL 131
>gi|167590453|ref|ZP_02382841.1| cytidine deaminase [Burkholderia ubonensis Bu]
Length = 129
Score = 102 bits (254), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 53/100 (53%), Positives = 71/100 (71%), Gaps = 7/100 (7%)
Query: 26 ARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQT--KF 83
AR+ AY PYS+ +VGAAL +D T+F GCNVENASYG+ CAE+TA+ AI+ G F
Sbjct: 13 ARERAYAPYSRFKVGAALEARDGTVFHGCNVENASYGLCNCAERTALFAAIAAGYRPGDF 72
Query: 84 KRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLI 123
R+AV A D++ V+PCG+CRQVI E +P DI+V++
Sbjct: 73 ARLAVVA---DTDDPVAPCGACRQVIIEIGAP--DIEVIL 107
>gi|392531589|ref|ZP_10278726.1| cytidine deaminase [Carnobacterium maltaromaticum ATCC 35586]
Length = 137
Score = 102 bits (254), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 49/108 (45%), Positives = 72/108 (66%), Gaps = 3/108 (2%)
Query: 29 NAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQTKFKRIAV 88
AY PYS VGAAL+ D I++GCN+ENASYG++ CAE+TAI KAISEG+ +F + +
Sbjct: 21 KAYVPYSHFPVGAALVTTDGKIYSGCNIENASYGLSNCAERTAIFKAISEGEREFSYLVI 80
Query: 89 SAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQVGLITI 136
+ D++ ++PCG+CRQVIAEF I + K D+ + + ++
Sbjct: 81 TG---DTDGPIAPCGACRQVIAEFCPSTMPILLTNKKGDQMETTIASL 125
>gi|384044867|ref|YP_005492884.1| cytidine deaminase [Bacillus megaterium WSH-002]
gi|345442558|gb|AEN87575.1| Cytidine deaminase [Bacillus megaterium WSH-002]
Length = 132
Score = 102 bits (254), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 49/94 (52%), Positives = 69/94 (73%), Gaps = 3/94 (3%)
Query: 19 LANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISE 78
L + + +AR+ AY PYSK +VGAALL +D ++ GCN+ENA+Y M CAE+TA+ KA SE
Sbjct: 6 LIDEAKKAREMAYVPYSKFKVGAALLTKDGKVYRGCNIENAAYSMCNCAERTALFKAYSE 65
Query: 79 GQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEF 112
G ++ +AV A D+++ VSPCG+CRQVI+E
Sbjct: 66 GDKEYAALAVVA---DTDRPVSPCGACRQVISEL 96
>gi|138896063|ref|YP_001126516.1| cytidine deaminase [Geobacillus thermodenitrificans NG80-2]
gi|196248956|ref|ZP_03147656.1| cytidine deaminase [Geobacillus sp. G11MC16]
gi|134267576|gb|ABO67771.1| Cytidine deaminase [Geobacillus thermodenitrificans NG80-2]
gi|196211832|gb|EDY06591.1| cytidine deaminase [Geobacillus sp. G11MC16]
Length = 132
Score = 102 bits (253), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 49/88 (55%), Positives = 66/88 (75%), Gaps = 3/88 (3%)
Query: 25 QARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQTKFK 84
+AR+ AY PYSK +VGAALL + +++ GCN+ENA+Y M CAE+TA+ KA SEG+T+F
Sbjct: 12 KARELAYVPYSKFKVGAALLTKGGSVYRGCNIENAAYSMCNCAERTALFKAYSEGETEFA 71
Query: 85 RIAVSAILPDSNKFVSPCGSCRQVIAEF 112
+AV A D+ + V PCG+CRQVIAE
Sbjct: 72 ALAVIA---DTPRPVPPCGACRQVIAEL 96
>gi|89100469|ref|ZP_01173331.1| cytidine deaminase [Bacillus sp. NRRL B-14911]
gi|89084812|gb|EAR63951.1| cytidine deaminase [Bacillus sp. NRRL B-14911]
Length = 132
Score = 102 bits (253), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 51/107 (47%), Positives = 70/107 (65%), Gaps = 3/107 (2%)
Query: 25 QARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQTKFK 84
+ARD AY PYS VGAALL +D I+ GCN+ENA+Y M CAE+TA+ KA SEG K+
Sbjct: 12 KARDKAYVPYSNFPVGAALLTEDGKIYHGCNIENAAYSMCNCAERTALFKAYSEGDKKYT 71
Query: 85 RIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQV 131
+AV A D+ + V PCG+CRQVI+E + + +K D +++
Sbjct: 72 AMAVVA---DTERPVPPCGACRQVISELCPNTMKVVLANLKGDINEL 115
>gi|374855149|dbj|BAL58013.1| cytidine deaminase [uncultured Chloroflexi bacterium]
Length = 149
Score = 102 bits (253), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 47/97 (48%), Positives = 69/97 (71%), Gaps = 5/97 (5%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
+ L +I+AR NAY PYS +VGAALL + I+ GCN+ENA+Y ++CAE+TA+ KA+
Sbjct: 14 KELIKQAIEARKNAYAPYSHYKVGAALLTRSGKIYRGCNIENAAYTPSVCAERTAVFKAV 73
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFS 113
SEG+T+F +A++ + D +PCG CRQV+ EF+
Sbjct: 74 SEGETEF--VAIAVVTADGG---APCGVCRQVLREFA 105
>gi|210076983|gb|ACJ06779.1| cytidine deaminase [Geobacillus stearothermophilus]
Length = 132
Score = 102 bits (253), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 52/98 (53%), Positives = 71/98 (72%), Gaps = 4/98 (4%)
Query: 15 IEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISK 74
IEQ +A +AR+ AY PYSK +VGAALL +D +++ GCN+ENA+Y + CAE+ A+ K
Sbjct: 3 IEQLIAEAK-KAREFAYVPYSKFKVGAALLTKDGSVYRGCNIENAAYSVCNCAERIALFK 61
Query: 75 AISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEF 112
A SEG+T+F +AV A D+ + V PCG+CRQVIAE
Sbjct: 62 AYSEGETEFAALAVIA---DTPRPVPPCGACRQVIAEL 96
>gi|225390114|ref|ZP_03759838.1| hypothetical protein CLOSTASPAR_03864 [Clostridium asparagiforme
DSM 15981]
gi|225043822|gb|EEG54068.1| hypothetical protein CLOSTASPAR_03864 [Clostridium asparagiforme
DSM 15981]
Length = 141
Score = 102 bits (253), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 54/113 (47%), Positives = 71/113 (62%), Gaps = 3/113 (2%)
Query: 19 LANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISE 78
L +++AR +Y PYS +VGAALL +D I TGCN+ENASY T CAE+TA+ KA+SE
Sbjct: 9 LVEKALEARRFSYVPYSGFRVGAALLAKDGRIITGCNIENASYTPTNCAERTAVFKAVSE 68
Query: 79 GQTKFKRIAVSA--ILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRS 129
G F+ IA++ L F PCG CRQV+ EF P VL+ K D++
Sbjct: 69 GILDFEAIAIAGGPGLEPPGDFAPPCGVCRQVLMEFCDPD-RFLVLLCKGDKT 120
>gi|322373096|ref|ZP_08047632.1| cytidine deaminase [Streptococcus sp. C150]
gi|321278138|gb|EFX55207.1| cytidine deaminase [Streptococcus sp. C150]
Length = 132
Score = 102 bits (253), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 50/103 (48%), Positives = 71/103 (68%), Gaps = 5/103 (4%)
Query: 31 YCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQTKFKRIAVSA 90
Y PYS+ +VGAALL ++ +F GCN+ENAS+G+T CAE+TAI KA+SEG F + A
Sbjct: 21 YVPYSQFRVGAALLTKEGKVFQGCNIENASFGLTNCAERTAIFKAVSEGHRDFTCL---A 77
Query: 91 ILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQVGL 133
I D+ +SPCG+CRQV+ EF D +V+++ D+S V +
Sbjct: 78 IYGDTKDPISPCGACRQVMVEFFKS--DSKVILIAEDKSTVEM 118
>gi|414083901|ref|YP_006992609.1| cytidine deaminase [Carnobacterium maltaromaticum LMA28]
gi|412997485|emb|CCO11294.1| cytidine deaminase [Carnobacterium maltaromaticum LMA28]
Length = 137
Score = 102 bits (253), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 49/108 (45%), Positives = 72/108 (66%), Gaps = 3/108 (2%)
Query: 29 NAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQTKFKRIAV 88
AY PYS VGAAL+ D I++GCN+ENASYG++ CAE+TAI KAISEG+ +F + +
Sbjct: 21 KAYVPYSHFPVGAALVTTDGKIYSGCNIENASYGLSNCAERTAIFKAISEGEREFSYLVI 80
Query: 89 SAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQVGLITI 136
+ D++ ++PCG+CRQVIAEF I + K D+ + + ++
Sbjct: 81 TG---DTDGPIAPCGACRQVIAEFCPSTMPILLTNKKGDQMETTIASL 125
>gi|154483544|ref|ZP_02025992.1| hypothetical protein EUBVEN_01248 [Eubacterium ventriosum ATCC
27560]
gi|149735454|gb|EDM51340.1| cytidine deaminase [Eubacterium ventriosum ATCC 27560]
Length = 129
Score = 102 bits (253), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 49/96 (51%), Positives = 68/96 (70%), Gaps = 4/96 (4%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
+ L + +++A + AY PYSK +VGAAL+ D ++TGCN+EN+S+G TICAE+ AISKA+
Sbjct: 4 RKLIDKALEAMNYAYAPYSKFKVGAALI-TDGVVYTGCNIENSSFGATICAERCAISKAV 62
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEF 112
SEG ++I AI+ S F PCG CRQV+ EF
Sbjct: 63 SEGHKNIQKI---AIVSSSGDFTPPCGICRQVMEEF 95
>gi|336435690|ref|ZP_08615405.1| cytidine deaminase [Lachnospiraceae bacterium 1_4_56FAA]
gi|336001143|gb|EGN31289.1| cytidine deaminase [Lachnospiraceae bacterium 1_4_56FAA]
Length = 142
Score = 102 bits (253), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 50/115 (43%), Positives = 76/115 (66%), Gaps = 7/115 (6%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
Q+L +++AR+ +Y PYS VGAA+L + I+TGCN+E+ASY TICAE+ A+ KA+
Sbjct: 9 QDLIRRAMKAREYSYSPYSNFSVGAAILSESGKIYTGCNIESASYTPTICAERVALFKAV 68
Query: 77 SEGQTKFKRIAVSAILPDSNK----FVSPCGSCRQVIAEFSSPACDIQVLIVKSD 127
SEG+ KFK +A+ + K VSPCG CRQ++ EF D++V++ ++
Sbjct: 69 SEGERKFKMLALVGGPKNGEKKTEEIVSPCGVCRQMLYEFGK---DLKVVMADNE 120
>gi|187919136|ref|YP_001888167.1| cytidine deaminase [Burkholderia phytofirmans PsJN]
gi|187717574|gb|ACD18797.1| cytidine deaminase [Burkholderia phytofirmans PsJN]
Length = 129
Score = 102 bits (253), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 51/107 (47%), Positives = 71/107 (66%), Gaps = 2/107 (1%)
Query: 15 IEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISK 74
+EQ L + AR+ AY PYSK +VGAALL +D +F GCNVENASYG+ CAE+TA
Sbjct: 3 MEQLLERAGV-AREKAYAPYSKFKVGAALLTKDGQVFDGCNVENASYGLCNCAERTAFFS 61
Query: 75 AISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQV 121
AI+ G + + A A++ D++ ++PCG+CRQVI E P I++
Sbjct: 62 AIAAGYQR-DQFAALAVIGDTDGPIAPCGACRQVIIELGGPELPIRL 107
>gi|403747521|ref|ZP_10955475.1| pyrimidine-nucleoside phosphorylase [Alicyclobacillus hesperidum
URH17-3-68]
gi|403120121|gb|EJY54540.1| pyrimidine-nucleoside phosphorylase [Alicyclobacillus hesperidum
URH17-3-68]
Length = 474
Score = 102 bits (253), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 56/129 (43%), Positives = 79/129 (61%), Gaps = 5/129 (3%)
Query: 25 QARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQTKFK 84
+AR NAY PYS VGAAL D I G N+ENASYG+T CAE+TAI A++ G+ +
Sbjct: 341 RARKNAYVPYSGFAVGAALRLTDGRIIEGANIENASYGLTNCAERTAIFAALAAGRETQE 400
Query: 85 R--IAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSD--RSQVGLITIDGMY 140
R IA A++ D+ + VSPCG+CRQV+AEF P + + ++ D R+ VG + + G +
Sbjct: 401 RPGIAEIAVVADAPEPVSPCGACRQVMAEFCPPETPVVLANLQGDVLRTTVGSL-LPGAF 459
Query: 141 LTLHCCWER 149
+ R
Sbjct: 460 GAAQMVYTR 468
>gi|406933993|gb|EKD68448.1| hypothetical protein ACD_47C00620G0001, partial [uncultured
bacterium]
Length = 221
Score = 102 bits (253), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 52/103 (50%), Positives = 71/103 (68%), Gaps = 10/103 (9%)
Query: 19 LANLSIQARDNAYCPYSKLQVGAALLCQDD-------TIFTGCNVENASYGMTICAEKTA 71
L + +A ++AY PYS+ +VGA LL +D + +TGCNVENASYG+T CAE+ A
Sbjct: 79 LFKAAKKASEHAYAPYSRFKVGAVLLLEDGRGEASQISAYTGCNVENASYGLTCCAERIA 138
Query: 72 ISKAISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSS 114
I KA+S+G KFK + + A + K VSPCG+CRQV+AEF+S
Sbjct: 139 IYKAVSDGNKKFKAMILYA---SAKKPVSPCGACRQVLAEFAS 178
>gi|229829944|ref|ZP_04456013.1| hypothetical protein GCWU000342_02050 [Shuttleworthia satelles DSM
14600]
gi|229791242|gb|EEP27356.1| hypothetical protein GCWU000342_02050 [Shuttleworthia satelles DSM
14600]
Length = 149
Score = 102 bits (253), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 49/113 (43%), Positives = 80/113 (70%), Gaps = 4/113 (3%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
++L + +++AR+ AY PYSK +VGAALL D I+ GCN+ENASYG + CAE+TA+ A+
Sbjct: 14 EDLIHEAMKARERAYAPYSKFRVGAALLA-DGKIYQGCNIENASYGASNCAERTAVFAAV 72
Query: 77 SEGQTKFKRIAVS-AILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDR 128
++G F+ IA++ +++ + PCG CRQV++EF+ ++QV+ K++R
Sbjct: 73 ADGARHFQAIAITGGKEEEADDAIWPCGICRQVLSEFADE--NMQVIAAKNER 123
>gi|402837554|ref|ZP_10886074.1| cytidine deaminase [Eubacteriaceae bacterium OBRC8]
gi|402274962|gb|EJU24130.1| cytidine deaminase [Eubacteriaceae bacterium OBRC8]
Length = 140
Score = 101 bits (252), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 53/117 (45%), Positives = 73/117 (62%), Gaps = 11/117 (9%)
Query: 19 LANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISE 78
L + +AR+NAY PYS +VGAALL ++ I+ GCNVENA+Y T CAE+TA KA+SE
Sbjct: 6 LIRRAFEARENAYTPYSNFKVGAALLAKNGKIYQGCNVENATYSPTNCAERTAFFKAVSE 65
Query: 79 GQTKFKRIAVSAILPDSN----KFVSPCGSCRQVIAEFSSPACDIQ---VLIVKSDR 128
G +F IA+ L + ++ PCG CRQV+ EF CD +++ KS+R
Sbjct: 66 GVREFDAIAIVGGLETTKEGEFEYTPPCGVCRQVMMEF----CDYNNFIIILAKSER 118
>gi|376260937|ref|YP_005147657.1| cytidine deaminase [Clostridium sp. BNL1100]
gi|373944931|gb|AEY65852.1| cytidine deaminase, homotetrameric [Clostridium sp. BNL1100]
Length = 129
Score = 101 bits (252), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 51/99 (51%), Positives = 70/99 (70%), Gaps = 4/99 (4%)
Query: 16 EQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKA 75
+ LA+ + +A D AY PYSK +VGAALL ++TGCNVE AS+G T CAE+TAI KA
Sbjct: 3 DMELASYARKAMDTAYAPYSKFKVGAALLTASGKVYTGCNVEIASFGATNCAERTAIFKA 62
Query: 76 IS-EGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFS 113
+S EG+ K RIA+++ + ++ PCG CRQV+AEF+
Sbjct: 63 VSEEGRIKIDRIAIAS---EDEDYIYPCGICRQVMAEFA 98
>gi|260587139|ref|ZP_05853052.1| cytidine deaminase [Blautia hansenii DSM 20583]
gi|260542510|gb|EEX23079.1| cytidine deaminase [Blautia hansenii DSM 20583]
Length = 140
Score = 101 bits (252), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 51/120 (42%), Positives = 76/120 (63%), Gaps = 8/120 (6%)
Query: 17 QNLANLSI-----QARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTA 71
+N+ NL + +AR AY PYS +VGAALL + ++ GCN+ENA+Y T CAE+TA
Sbjct: 2 ENMDNLELLEEAKKARLKAYTPYSNFKVGAALLTKSGKVYLGCNIENATYTPTNCAERTA 61
Query: 72 ISKAISEGQTKFKRIAVSAIL--PDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRS 129
KA+SEG+ +F++IA+ D+N SPCG CRQV+ EF P + Q+++ + +
Sbjct: 62 FFKAVSEGEREFEKIAIVGAKDGEDANVMCSPCGVCRQVMMEFCDPK-EFQIILANGENT 120
>gi|328955115|ref|YP_004372448.1| cytidine deaminase [Coriobacterium glomerans PW2]
gi|328455439|gb|AEB06633.1| cytidine deaminase [Coriobacterium glomerans PW2]
Length = 138
Score = 101 bits (252), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 52/118 (44%), Positives = 72/118 (61%), Gaps = 2/118 (1%)
Query: 19 LANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISE 78
L +I+AR AY PYS+ VGAAL C D ++ GCN+ENA+Y + CAE+TAI +AI +
Sbjct: 6 LVRAAIEARSQAYVPYSRFSVGAALKCADGAVYCGCNIENAAYSPSCCAERTAIFRAIFD 65
Query: 79 GQTKFKRIAVSAILPDS--NKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQVGLI 134
G+ +F IAV D ++ +PCG CRQV+ EF P VL ++D Q L+
Sbjct: 66 GRREFSAIAVVGGPADEPISRLCAPCGVCRQVMMEFCDPKTFRIVLAAQADAPQSHLL 123
>gi|170692981|ref|ZP_02884142.1| cytidine deaminase [Burkholderia graminis C4D1M]
gi|170141979|gb|EDT10146.1| cytidine deaminase [Burkholderia graminis C4D1M]
Length = 129
Score = 101 bits (252), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 48/96 (50%), Positives = 66/96 (68%), Gaps = 1/96 (1%)
Query: 26 ARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQTKFKR 85
AR+ AY PYSK +VGAALL +D +F GCNVENASYG+ CAE+TA AI+ G + +
Sbjct: 13 AREKAYAPYSKFKVGAALLTKDGRVFDGCNVENASYGLCNCAERTAFFSAIAAGYQR-DQ 71
Query: 86 IAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQV 121
A A++ D++ ++PCG+CRQVI E P I++
Sbjct: 72 FAALAVIGDTDGPIAPCGACRQVIIELGGPELRIRL 107
>gi|308508465|ref|XP_003116416.1| hypothetical protein CRE_08956 [Caenorhabditis remanei]
gi|308251360|gb|EFO95312.1| hypothetical protein CRE_08956 [Caenorhabditis remanei]
Length = 155
Score = 101 bits (252), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 50/120 (41%), Positives = 76/120 (63%), Gaps = 7/120 (5%)
Query: 12 LDPIEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTA 71
L E+++ + +I+A AYC YS +VGAA++C+D + G N ENASYG TICAE++A
Sbjct: 8 LTDFEKSIVDKAIEAMQFAYCKYSNFKVGAAVVCEDGEVIIGANHENASYGATICAERSA 67
Query: 72 ISKAISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQV 131
++ A+++G KFK +A++ L D SPCG CRQ + EF D +V++ S Q+
Sbjct: 68 LTSALTKGHRKFKLVAIATELEDP---CSPCGICRQFLIEFG----DYKVILASSTSEQI 120
>gi|365130604|ref|ZP_09341571.1| cytidine deaminase [Subdoligranulum sp. 4_3_54A2FAA]
gi|363619919|gb|EHL71225.1| cytidine deaminase [Subdoligranulum sp. 4_3_54A2FAA]
Length = 141
Score = 101 bits (252), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 53/121 (43%), Positives = 77/121 (63%), Gaps = 10/121 (8%)
Query: 15 IEQN-----LANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEK 69
+EQN L + AR+ AY PYS +VGAALL ++ +++TGCN+E A++ T CAE+
Sbjct: 1 MEQNIDRKALIRAAFAAREYAYTPYSNFKVGAALLAKNGSVYTGCNIECATFTPTNCAER 60
Query: 70 TAISKAISEGQTKFKRIAVSAI---LPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKS 126
TA+ KA+SEG +F +AV PD SPCG CRQ++ EF P D++V++ KS
Sbjct: 61 TALFKAVSEGVHEFAAVAVVGAKDGAPDDALVTSPCGVCRQMLYEFGGP--DLRVIMAKS 118
Query: 127 D 127
+
Sbjct: 119 E 119
>gi|421870167|ref|ZP_16301804.1| Cytidine deaminase [Burkholderia cenocepacia H111]
gi|358070774|emb|CCE52682.1| Cytidine deaminase [Burkholderia cenocepacia H111]
Length = 129
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 51/100 (51%), Positives = 70/100 (70%), Gaps = 7/100 (7%)
Query: 26 ARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQT--KF 83
AR+ AY PYS+ +VGAAL +D T+F GCNVENASYG+ CAE+TA+ AI+ G F
Sbjct: 13 ARERAYAPYSRFKVGAALQARDGTVFHGCNVENASYGLCTCAERTALFAAIAAGYRPGDF 72
Query: 84 KRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLI 123
R+AV + D++ ++PCG+CRQVI E P DI+V++
Sbjct: 73 ARLAV---VGDTDGPIAPCGACRQVIIEIGKP--DIEVIL 107
>gi|339010533|ref|ZP_08643103.1| cytidine deaminase [Brevibacillus laterosporus LMG 15441]
gi|421873900|ref|ZP_16305509.1| cytidine deaminase [Brevibacillus laterosporus GI-9]
gi|338772688|gb|EGP32221.1| cytidine deaminase [Brevibacillus laterosporus LMG 15441]
gi|372457011|emb|CCF15058.1| cytidine deaminase [Brevibacillus laterosporus GI-9]
Length = 132
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 52/108 (48%), Positives = 72/108 (66%), Gaps = 5/108 (4%)
Query: 16 EQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKA 75
+Q L + AR+ AY PYSK VGAALL + ++ GCN+ENA+Y + CAE+TA+ KA
Sbjct: 3 QQQLIEQAKTARETAYVPYSKFPVGAALLSETGKVYLGCNIENAAYPLCNCAERTALFKA 62
Query: 76 ISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLI 123
SEG ++ IAV A D+ K V PCG+CRQV+AE P D++V++
Sbjct: 63 YSEGDKTYQAIAVVA---DTPKPVPPCGACRQVMAEMCPP--DMKVIL 105
>gi|289577677|ref|YP_003476304.1| cytidine deaminase [Thermoanaerobacter italicus Ab9]
gi|297543984|ref|YP_003676286.1| cytidine deaminase [Thermoanaerobacter mathranii subsp. mathranii
str. A3]
gi|289527390|gb|ADD01742.1| cytidine deaminase [Thermoanaerobacter italicus Ab9]
gi|296841759|gb|ADH60275.1| cytidine deaminase [Thermoanaerobacter mathranii subsp. mathranii
str. A3]
Length = 135
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 50/120 (41%), Positives = 76/120 (63%), Gaps = 6/120 (5%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
+ L L+ +AR+ AY PYS +VGA +L +D + GCN+ENASYG+T CAE+TA+ A
Sbjct: 7 EKLIELAKEAREKAYVPYSHFKVGACVLTEDGKTYQGCNIENASYGLTNCAERTALFSAY 66
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQVGLITI 136
+ G+ K K IAV A D+ VSPCG+CRQV+ E + V+++ + + ++T+
Sbjct: 67 ANGERKLKAIAVVA---DTEGPVSPCGACRQVMMELGG---EDMVVVLSNMKGDYAVVTV 120
>gi|242220707|ref|XP_002476116.1| predicted protein [Postia placenta Mad-698-R]
gi|220724669|gb|EED78696.1| predicted protein [Postia placenta Mad-698-R]
Length = 157
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/114 (49%), Positives = 71/114 (62%), Gaps = 5/114 (4%)
Query: 14 PIEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAIS 73
P + L + A+ NAYC YS VGAALL + G NVENASYG TICAE+TAI
Sbjct: 11 PDRERLIKAAFDAKKNAYCKYSNFPVGAALLTASGEVIRGANVENASYGGTICAERTAIV 70
Query: 74 KAISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSD 127
KA+SEG F +AV + D+ +SPCG CRQV+ EF A ++ VL+V +D
Sbjct: 71 KAVSEGIRSFVGLAVVTDVADA---LSPCGICRQVLREFC--ALNMPVLLVPAD 119
>gi|410082325|ref|XP_003958741.1| hypothetical protein KAFR_0H01970 [Kazachstania africana CBS 2517]
gi|372465330|emb|CCF59606.1| hypothetical protein KAFR_0H01970 [Kazachstania africana CBS 2517]
Length = 140
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 55/120 (45%), Positives = 76/120 (63%), Gaps = 3/120 (2%)
Query: 18 NLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAIS 77
L + + AR AYCPYSK VGA +L +D +GCNVEN+SYG TICAE+TA+ K+IS
Sbjct: 12 TLRDKVLYARTKAYCPYSKFFVGAVILTKDGDYVSGCNVENSSYGGTICAERTAVVKSIS 71
Query: 78 EGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQVGLITID 137
EG K + + A++ K VSPCG CRQ ++EF P V++ D S+ L+T++
Sbjct: 72 EGIPKEDWVCL-AVIGGHEKIVSPCGICRQFLSEF-VPG-HFPVIMFSGDGSRHKLMTMN 128
>gi|220928030|ref|YP_002504939.1| cytidine deaminase [Clostridium cellulolyticum H10]
gi|219998358|gb|ACL74959.1| cytidine deaminase [Clostridium cellulolyticum H10]
Length = 129
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 51/99 (51%), Positives = 70/99 (70%), Gaps = 4/99 (4%)
Query: 16 EQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKA 75
E LA+ + +A D AY PYSK +VGAALL ++TGCN+E AS+G T CAE+TAI KA
Sbjct: 3 EIELASRARKAMDTAYAPYSKFRVGAALLTASGRVYTGCNIEIASFGATNCAERTAIFKA 62
Query: 76 IS-EGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFS 113
+S EG+ K +IA+++ D ++ PCG CRQV+AEF+
Sbjct: 63 VSEEGRIKIDKIAIAS---DDEDYIYPCGICRQVMAEFA 98
>gi|399046966|ref|ZP_10739154.1| cytidine deaminase, homotetrameric [Brevibacillus sp. CF112]
gi|433545481|ref|ZP_20501834.1| cytidine deaminase [Brevibacillus agri BAB-2500]
gi|398055116|gb|EJL47208.1| cytidine deaminase, homotetrameric [Brevibacillus sp. CF112]
gi|432183136|gb|ELK40684.1| cytidine deaminase [Brevibacillus agri BAB-2500]
Length = 132
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 51/97 (52%), Positives = 67/97 (69%), Gaps = 3/97 (3%)
Query: 16 EQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKA 75
+Q L +I+AR+ AY PYSK QVGAALLC+ ++ G N+ENA+Y + CAE+TA+ KA
Sbjct: 3 KQALLAKAIEARELAYVPYSKFQVGAALLCESGNVYLGGNIENAAYSLCNCAERTALFKA 62
Query: 76 ISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEF 112
SE +K +AV+A P VSPCG+CRQVIAE
Sbjct: 63 FSERDRTYKALAVAADTPGP---VSPCGACRQVIAEL 96
>gi|226311652|ref|YP_002771546.1| cytidine deaminase [Brevibacillus brevis NBRC 100599]
gi|226094600|dbj|BAH43042.1| cytidine deaminase [Brevibacillus brevis NBRC 100599]
Length = 132
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 51/97 (52%), Positives = 68/97 (70%), Gaps = 3/97 (3%)
Query: 16 EQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKA 75
+Q L +I+AR AY PYSK QVGAALL + ++ G N+ENA+Y + CAE+TA+ KA
Sbjct: 3 KQALLAQAIEARKLAYVPYSKFQVGAALLAESGKVYLGGNIENAAYSLCNCAERTALFKA 62
Query: 76 ISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEF 112
SEG +K +AV+A D+ + VSPCG+CRQVIAE
Sbjct: 63 YSEGDRTYKALAVAA---DTPQAVSPCGACRQVIAEL 96
>gi|125985691|ref|XP_001356609.1| GA21012 [Drosophila pseudoobscura pseudoobscura]
gi|54644933|gb|EAL33673.1| GA21012 [Drosophila pseudoobscura pseudoobscura]
Length = 170
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 54/124 (43%), Positives = 78/124 (62%), Gaps = 5/124 (4%)
Query: 4 HDIMEFSALDPIEQNLANLSIQARDNAYCPYSKLQVGAALLCQ-DDTIFTGCNVENASYG 62
+++ + +LDP Q L + + R AY PYS +VG+A + IFTGCNVENA++
Sbjct: 15 EEVVTYGSLDPSVQELLLAASEVRQRAYVPYSGFKVGSAFRATATNQIFTGCNVENAAFT 74
Query: 63 MTICAEKTAISKAISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVL 122
CAE+TA++KA+SEG T+F AV A PD+ F +PCG CRQ I EF++ DI +
Sbjct: 75 PCSCAERTALAKAVSEGATEFSVGAVLAYEPDA--FTTPCGVCRQFIREFAT--SDIPIY 130
Query: 123 IVKS 126
I ++
Sbjct: 131 IAQA 134
>gi|195147776|ref|XP_002014850.1| GL18730 [Drosophila persimilis]
gi|194106803|gb|EDW28846.1| GL18730 [Drosophila persimilis]
Length = 170
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 54/124 (43%), Positives = 78/124 (62%), Gaps = 5/124 (4%)
Query: 4 HDIMEFSALDPIEQNLANLSIQARDNAYCPYSKLQVGAALLCQ-DDTIFTGCNVENASYG 62
+++ + +LDP Q L + + R AY PYS +VG+A + IFTGCNVENA++
Sbjct: 15 EEVVTYGSLDPAVQELLLAASEVRQRAYVPYSGFKVGSAFRATATNQIFTGCNVENAAFT 74
Query: 63 MTICAEKTAISKAISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVL 122
CAE+TA++KA+SEG T+F AV A PD+ F +PCG CRQ I EF++ DI +
Sbjct: 75 PCSCAERTALAKAVSEGVTEFSVGAVLAYEPDA--FTTPCGVCRQFIREFAT--SDIPIY 130
Query: 123 IVKS 126
I ++
Sbjct: 131 IAQA 134
>gi|344305552|gb|EGW35784.1| hypothetical protein SPAPADRAFT_58993 [Spathaspora passalidarum
NRRL Y-27907]
Length = 147
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 53/108 (49%), Positives = 70/108 (64%), Gaps = 5/108 (4%)
Query: 19 LANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISE 78
L+ ++A+ +Y PYSK +VG +L + +G N+ENASYG +ICAE+T ISKAI
Sbjct: 20 LSEEVLKAKSLSYSPYSKFRVGCTILTASNEFISGANIENASYGASICAERTTISKAILS 79
Query: 79 GQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKS 126
G T FK IA+S+ D F+SPCG CRQVI EF A D+ V + KS
Sbjct: 80 GHTTFKVIAISSDQEDD--FISPCGICRQVIREF---AKDVPVYMFKS 122
>gi|308483011|ref|XP_003103708.1| CRE-CDD-1 protein [Caenorhabditis remanei]
gi|308259726|gb|EFP03679.1| CRE-CDD-1 protein [Caenorhabditis remanei]
Length = 157
Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 55/128 (42%), Positives = 76/128 (59%), Gaps = 7/128 (5%)
Query: 12 LDPIEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTA 71
L EQ L + ++ A + AYC YS +VGAAL+C+D I G N ENASYG TICAE++A
Sbjct: 8 LTQFEQELVDKAVGAMEKAYCKYSGFKVGAALVCEDGEIIIGANHENASYGATICAERSA 67
Query: 72 ISKAISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQV 131
+ A+++G KFK +AV+ L SPCG CRQ + EF D +V++ S Q+
Sbjct: 68 MVTALTKGHRKFKLLAVATELEAP---CSPCGICRQYLIEFG----DYKVILGSSTSDQI 120
Query: 132 GLITIDGM 139
T G+
Sbjct: 121 IETTTYGL 128
>gi|296423732|ref|XP_002841407.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295637645|emb|CAZ85598.1| unnamed protein product [Tuber melanosporum]
Length = 173
Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 52/104 (50%), Positives = 69/104 (66%), Gaps = 4/104 (3%)
Query: 11 ALDPIE-QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEK 69
L P E Q L+ + A+D +Y PYS +VG ALLC+D + G N+ENASY +TICAE+
Sbjct: 6 GLTPEEIQELSKRAAAAKDVSYSPYSNFRVGCALLCEDGSWVIGANIENASYPVTICAER 65
Query: 70 TAISKAISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFS 113
TA+ KAI+EG+ +F+ I +S D + SPCG CRQ I EFS
Sbjct: 66 TALVKAITEGKKRFRAIGLSV---DVSPPASPCGMCRQFIREFS 106
>gi|308491416|ref|XP_003107899.1| CRE-CDD-2 protein [Caenorhabditis remanei]
gi|308249846|gb|EFO93798.1| CRE-CDD-2 protein [Caenorhabditis remanei]
Length = 164
Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 53/113 (46%), Positives = 70/113 (61%), Gaps = 7/113 (6%)
Query: 19 LANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISE 78
L +L+ A A+CPYSK VGAALL + GCNVENASYG TICAE++AI A+S+
Sbjct: 15 LVHLARNAMKRAHCPYSKFPVGAALLTESGETILGCNVENASYGGTICAERSAIVSAVSQ 74
Query: 79 GQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQV 131
G KF+ IAV L + SPCG CRQ + EF D +V++ + S++
Sbjct: 75 GHNKFRAIAVVTGLSEP---ASPCGLCRQFLVEFG----DFKVVVGTASNSKI 120
>gi|118431308|ref|NP_147677.2| cytidine deaminase [Aeropyrum pernix K1]
gi|116062630|dbj|BAA80023.2| cytidine deaminase [Aeropyrum pernix K1]
Length = 136
Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 50/120 (41%), Positives = 80/120 (66%), Gaps = 5/120 (4%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
++L +++ AY PYS+ +VGAA+ D ++ GCNVEN+SYG+T+CAE+TA+ KA+
Sbjct: 7 EDLVGAAVEQAGRAYAPYSRFRVGAAVRTSDGRVYGGCNVENSSYGLTVCAERTAVFKAV 66
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQV-LIVKSDRSQVGLIT 135
SEG +AV A DS++ V PCG+C QV++EF+ D +V +I ++ R +V ++
Sbjct: 67 SEGSRGVVEVAVYAA--DSDEPVPPCGACLQVLSEFAR--GDPRVYMISRTGRIRVARLS 122
>gi|421074941|ref|ZP_15535960.1| cytidine deaminase [Pelosinus fermentans JBW45]
gi|392527001|gb|EIW50108.1| cytidine deaminase [Pelosinus fermentans JBW45]
Length = 134
Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/96 (51%), Positives = 68/96 (70%), Gaps = 3/96 (3%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
+ L + R+ AY PYS +VGAA+L ++ I+ GCNVENASYG++ CAE+TAI KA+
Sbjct: 2 KKLIQAAKSGRECAYVPYSNFKVGAAVLTKNGKIYVGCNVENASYGLSNCAERTAIFKAV 61
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEF 112
SEG + I AI+ D+ K V+PCG+CRQV++EF
Sbjct: 62 SEGNQELTAI---AIVADTVKPVAPCGACRQVMSEF 94
>gi|300173755|ref|YP_003772921.1| cytidine deaminase [Leuconostoc gasicomitatum LMG 18811]
gi|299888134|emb|CBL92102.1| Cytidine deaminase [Leuconostoc gasicomitatum LMG 18811]
Length = 131
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 46/106 (43%), Positives = 70/106 (66%), Gaps = 3/106 (2%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
Q L ++++A + Y PYS VGAALL +DTIF G N+EN S+G+T CAE+TAI AI
Sbjct: 6 QQLVKVALEALNQTYTPYSHFPVGAALLTDNDTIFKGVNIENVSFGLTNCAERTAIFSAI 65
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVL 122
+ G +FK + ++ +++ ++PCG+CRQV+ EF P I ++
Sbjct: 66 AAGYKRFKGLVIAG---RTDEPIAPCGACRQVMVEFFEPDMPIWLI 108
>gi|333446085|ref|ZP_08481027.1| cytidine deaminase [Leuconostoc inhae KCTC 3774]
Length = 140
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 46/106 (43%), Positives = 70/106 (66%), Gaps = 3/106 (2%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
Q L ++++A + Y PYS VGAALL +DTIF G N+EN S+G+T CAE+TAI AI
Sbjct: 15 QQLVKVALEALNQTYTPYSHFPVGAALLTDNDTIFKGVNIENVSFGLTNCAERTAIFSAI 74
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVL 122
+ G +FK + ++ +++ ++PCG+CRQV+ EF P I ++
Sbjct: 75 AAGYKRFKGLVIAG---RTDEPIAPCGACRQVMVEFFEPDMPIWLI 117
>gi|1483233|emb|CAA62521.1| cytidine deaminase [Brugia pahangi]
Length = 133
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/101 (49%), Positives = 70/101 (69%), Gaps = 7/101 (6%)
Query: 26 ARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQTKFKR 85
A D AYCPYSK VGAALL +D I TG NVE+ASYG TICAE++A+++A++EG +F+
Sbjct: 15 AMDRAYCPYSKFTVGAALLTKDGKIITGGNVESASYGGTICAERSAVTRAVAEGYREFQA 74
Query: 86 IAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKS 126
+AV A + +PCG CRQ + EF D++V+++ S
Sbjct: 75 VAVCATPAEPT---APCGLCRQFLIEFG----DMKVIMISS 108
>gi|71279710|ref|YP_268699.1| cytidine deaminase [Colwellia psychrerythraea 34H]
gi|71145450|gb|AAZ25923.1| cytidine deaminase [Colwellia psychrerythraea 34H]
Length = 139
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/105 (48%), Positives = 65/105 (61%), Gaps = 3/105 (2%)
Query: 25 QARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQTKFK 84
+A AY PYSK VGA+ L D I GCNVENASYG+TICAE+ IS A+ +G+ FK
Sbjct: 18 EAYQRAYAPYSKFHVGASALTTDGDIVNGCNVENASYGLTICAERNCISHAVVQGKQMFK 77
Query: 85 RIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRS 129
I I + +K PCG+CRQVIAEF + + + K+DR
Sbjct: 78 FI---MIYTEQDKLTPPCGACRQVIAEFFEQSALVVAVNHKNDRK 119
>gi|421227322|ref|ZP_15684027.1| cytidine deaminase [Streptococcus pneumoniae 2072047]
gi|395595490|gb|EJG55721.1| cytidine deaminase [Streptococcus pneumoniae 2072047]
Length = 100
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 46/94 (48%), Positives = 65/94 (69%), Gaps = 3/94 (3%)
Query: 19 LANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISE 78
L L+I+ +AY PYS +GA L+ +D +++TG N+ENASY +T C E+TA+ KAISE
Sbjct: 6 LIELAIETSKHAYVPYSHFPIGAVLVAKDGSVYTGVNIENASYPLTNCGERTAVFKAISE 65
Query: 79 GQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEF 112
GQ +F + V + K +SPCG+CRQV+AEF
Sbjct: 66 GQREFSELIVYG---QTEKPISPCGACRQVMAEF 96
>gi|170576775|ref|XP_001893761.1| cytidine deaminase, identical [Brugia malayi]
gi|158600043|gb|EDP37402.1| cytidine deaminase, identical [Brugia malayi]
Length = 133
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/101 (49%), Positives = 69/101 (68%), Gaps = 7/101 (6%)
Query: 26 ARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQTKFKR 85
A D AYCPYSK VGAALL +D I G NVENASYG TICAE++A+++A++EG +F+
Sbjct: 15 AMDRAYCPYSKFTVGAALLTKDGKIIXGGNVENASYGGTICAERSAVTRAVAEGYREFQA 74
Query: 86 IAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKS 126
+AV A + +PCG CRQ + EF D++V+++ S
Sbjct: 75 VAVCATPAEPT---APCGLCRQFLIEFG----DMKVIMISS 108
>gi|126273634|ref|XP_001387274.1| predicted protein [Scheffersomyces stipitis CBS 6054]
gi|126213144|gb|EAZ63251.1| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 151
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/120 (44%), Positives = 76/120 (63%), Gaps = 6/120 (5%)
Query: 24 IQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQTKF 83
++ARD +Y PYSK +VG L+ + +G N+ENASYG ICAE+TAISKA+ EG KF
Sbjct: 26 LEARDLSYSPYSKFRVGCTLITESGQYVSGANIENASYGACICAERTAISKALLEGNRKF 85
Query: 84 KRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQVGLITIDGMYLTL 143
K IA+S+ DS + +SPCG CRQ I EF ++ + + +D S + + D + L+
Sbjct: 86 KVIAISS---DSKEPISPCGICRQFIREFGP---NVPIYMFGADGSFIKVFLQDLLPLSF 139
>gi|307727194|ref|YP_003910407.1| cytidine deaminase [Burkholderia sp. CCGE1003]
gi|307587719|gb|ADN61116.1| cytidine deaminase [Burkholderia sp. CCGE1003]
Length = 129
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 48/96 (50%), Positives = 65/96 (67%), Gaps = 1/96 (1%)
Query: 26 ARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQTKFKR 85
AR+ AY PYSK +VGAALL +D +F GCNVENASYG+ CAE+TA AI+ G + +
Sbjct: 13 AREKAYAPYSKFKVGAALLTKDGQVFDGCNVENASYGLCNCAERTAFFSAIAAGYQR-DQ 71
Query: 86 IAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQV 121
A A++ D+ ++PCG+CRQVI E P I++
Sbjct: 72 FAALAVIGDTEGPIAPCGACRQVIIELGGPKLPIRL 107
>gi|338812827|ref|ZP_08624980.1| cytidine deaminase [Acetonema longum DSM 6540]
gi|337275126|gb|EGO63610.1| cytidine deaminase [Acetonema longum DSM 6540]
Length = 137
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/97 (52%), Positives = 67/97 (69%), Gaps = 3/97 (3%)
Query: 16 EQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKA 75
+++L + AR +Y PYS QVGAALLC+D T++TGCNVEN SYG TICAE+TA+ KA
Sbjct: 5 DRDLLRQAAAARMLSYSPYSGYQVGAALLCEDGTVYTGCNVENISYGGTICAERTAVVKA 64
Query: 76 ISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEF 112
+SEG+ K +IAVS + PCG C Q ++EF
Sbjct: 65 VSEGRQKLVKIAVSVSGEEPG---IPCGICLQFLSEF 98
>gi|320102590|ref|YP_004178181.1| cytidine deaminase [Isosphaera pallida ATCC 43644]
gi|319749872|gb|ADV61632.1| cytidine deaminase [Isosphaera pallida ATCC 43644]
Length = 160
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/111 (44%), Positives = 72/111 (64%), Gaps = 5/111 (4%)
Query: 16 EQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKA 75
E+ L + +A + AYCPYS+ VGAA+L + I+TGCNVENASYG+TICAE+ A+++
Sbjct: 24 EERLVAEARRASERAYCPYSQFAVGAAVLTEAGAIYTGCNVENASYGLTICAERAALART 83
Query: 76 ISE--GQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIV 124
+ E G +I A+ +++ PCG+CRQVI EF S +++L V
Sbjct: 84 VVEHQGPDALPKIVAVAVYTPTDQPTPPCGACRQVIFEFGS---QVRILAV 131
>gi|383786780|ref|YP_005471349.1| cytidine deaminase [Fervidobacterium pennivorans DSM 9078]
gi|383109627|gb|AFG35230.1| cytidine deaminase, homotetrameric [Fervidobacterium pennivorans
DSM 9078]
Length = 135
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/140 (39%), Positives = 85/140 (60%), Gaps = 11/140 (7%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
+ L + +A NAY PYS+ VGAALL + ++ G NVENASYG+T CAE+TAI A+
Sbjct: 4 EELIQKAKEAMKNAYAPYSQFHVGAALLTKSGKVYIGANVENASYGLTNCAERTAIFSAV 63
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQVGLITI 136
+ G+ +F + V + D+ K V+PCG+CRQV+AEF + +I+ + + +V T+
Sbjct: 64 ANGEREFDTLVV---IADTEKPVAPCGACRQVMAEFGNFK-----VILTNLKGEVLETTV 115
Query: 137 DGMYLTLHCCWERGNLVLPD 156
+ L +++GNL D
Sbjct: 116 SEL---LPYAFDKGNLRGKD 132
>gi|150018261|ref|YP_001310515.1| cytidine deaminase [Clostridium beijerinckii NCIMB 8052]
gi|149904726|gb|ABR35559.1| cytidine deaminase [Clostridium beijerinckii NCIMB 8052]
Length = 140
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/115 (46%), Positives = 71/115 (61%), Gaps = 11/115 (9%)
Query: 19 LANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISE 78
L + +A+ Y PYS VGAALLC D TI+ GCN+ENA++ T CAE+TA KAISE
Sbjct: 7 LIEKAFEAQKFCYTPYSNFNVGAALLCDDGTIYQGCNIENAAFTPTNCAERTAFFKAISE 66
Query: 79 GQTKFKRIAV----SAILPDSNKFVSPCGSCRQVIAEFSSPACDI---QVLIVKS 126
G+ +F IAV + P F +PC CRQV+AEF CD+ +++I KS
Sbjct: 67 GKKEFTAIAVVGNKKGVKPGEGDFCAPCAVCRQVMAEF----CDLKTFKIIIAKS 117
>gi|290968421|ref|ZP_06559960.1| cytidine deaminase [Megasphaera genomosp. type_1 str. 28L]
gi|335050232|ref|ZP_08543206.1| cytidine deaminase [Megasphaera sp. UPII 199-6]
gi|290781417|gb|EFD94006.1| cytidine deaminase [Megasphaera genomosp. type_1 str. 28L]
gi|333757563|gb|EGL35123.1| cytidine deaminase [Megasphaera sp. UPII 199-6]
Length = 130
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 47/103 (45%), Positives = 68/103 (66%), Gaps = 3/103 (2%)
Query: 13 DPIEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAI 72
D I + L + R +Y PYS+ VGAA+L D ++TGCNVENASYG+TICAE+ A+
Sbjct: 4 DVICRRLLAAARAVRVRSYAPYSRFSVGAAVLGTDGMVYTGCNVENASYGLTICAERNAM 63
Query: 73 SKAISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSP 115
+ A++ G +F + AI+ + + PCG+CRQV+AEF+ P
Sbjct: 64 THAVAAGCREFTAV---AIVGNEEHYTPPCGACRQVLAEFNVP 103
>gi|302686626|ref|XP_003032993.1| hypothetical protein SCHCODRAFT_85109 [Schizophyllum commune H4-8]
gi|300106687|gb|EFI98090.1| hypothetical protein SCHCODRAFT_85109 [Schizophyllum commune H4-8]
Length = 166
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/114 (50%), Positives = 69/114 (60%), Gaps = 5/114 (4%)
Query: 19 LANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISE 78
L + +A+ +Y PYSK VGAALL D I G N+ENASYG TICAE+TAI KA SE
Sbjct: 17 LIKSAFEAKTGSYSPYSKFPVGAALLTPDGRIVKGANIENASYGGTICAERTAIVKAASE 76
Query: 79 GQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQVG 132
G F +AV + D SPCG CRQV+ EF A + VL+V +D Q G
Sbjct: 77 GIRSFIGVAV---VTDLTTPASPCGICRQVLREFC--ALETPVLLVPADYPQKG 125
>gi|210630195|ref|ZP_03296310.1| hypothetical protein COLSTE_00194 [Collinsella stercoris DSM 13279]
gi|210160668|gb|EEA91639.1| cytidine deaminase [Collinsella stercoris DSM 13279]
Length = 138
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/116 (45%), Positives = 71/116 (61%), Gaps = 5/116 (4%)
Query: 19 LANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISE 78
L +I AR+NAY PYS VGAALLC D T++ GCN+ENA+Y CAE+TAI +A+ +
Sbjct: 6 LVRAAITARENAYAPYSHFAVGAALLCADGTVYGGCNIENAAYSPGNCAERTAIFRAVFD 65
Query: 79 GQTKFKRIAVSAILPDS---NKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQV 131
G F IAV P ++ +PCG CRQV+ EF PA ++L+ SD +
Sbjct: 66 GHRDFAAIAVVG-GPQGQPISELCAPCGVCRQVMREFCDPA-TFRILMGTSDTEYI 119
>gi|333397042|ref|ZP_08478855.1| cytidine deaminase [Leuconostoc gelidum KCTC 3527]
gi|406600429|ref|YP_006745775.1| cytidine deaminase [Leuconostoc gelidum JB7]
gi|406371964|gb|AFS40889.1| cytidine deaminase [Leuconostoc gelidum JB7]
Length = 140
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 47/106 (44%), Positives = 69/106 (65%), Gaps = 3/106 (2%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
Q L +++ A + Y PYS VGAALL DDTIF G N+EN S+G+T CAE+TAI AI
Sbjct: 15 QQLVEVALGALNQTYTPYSHFPVGAALLTDDDTIFKGVNIENVSFGLTNCAERTAIFSAI 74
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVL 122
+ G +FK + ++ +++ ++PCG+CRQV+ EF P I ++
Sbjct: 75 AAGYKQFKGLVIAG---RTDEPIAPCGACRQVMVEFFEPDMPIWLI 117
>gi|402300043|ref|ZP_10819596.1| cytidine deaminase [Bacillus alcalophilus ATCC 27647]
gi|401724834|gb|EJS98163.1| cytidine deaminase [Bacillus alcalophilus ATCC 27647]
Length = 132
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/90 (54%), Positives = 64/90 (71%), Gaps = 3/90 (3%)
Query: 23 SIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQTK 82
+I+AR+NAY PYSK VGAALL D I+ G N+ENAS+G+T CAE+TA+ KA S+G K
Sbjct: 10 AIKARENAYVPYSKFPVGAALLMDDGQIYHGANIENASFGLTNCAERTALFKAYSDGNRK 69
Query: 83 FKRIAVSAILPDSNKFVSPCGSCRQVIAEF 112
K +A+ A D+ SPCG+CRQV+ E
Sbjct: 70 VKAVAIVA---DTEGPCSPCGACRQVMVEL 96
>gi|325680897|ref|ZP_08160434.1| cytidine deaminase [Ruminococcus albus 8]
gi|324107361|gb|EGC01640.1| cytidine deaminase [Ruminococcus albus 8]
Length = 125
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 47/105 (44%), Positives = 71/105 (67%), Gaps = 2/105 (1%)
Query: 25 QARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQTKFK 84
+A +N+YC YS +VGAALLC D ++F GCN+EN+SY +T CAE+TAI KA+SEG +F
Sbjct: 12 KAAENSYCKYSHFRVGAALLCADGSVFRGCNIENSSYSLTNCAERTAIFKAVSEGVREFS 71
Query: 85 RIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRS 129
IA+ D + PCG+C QV++EF D+++++ + +
Sbjct: 72 AIAIVGGDGDLSSPCYPCGACLQVMSEFCGG--DLRIILTDGEHT 114
>gi|423084179|ref|ZP_17072684.1| cytidine deaminase [Clostridium difficile 002-P50-2011]
gi|423086764|ref|ZP_17075155.1| cytidine deaminase [Clostridium difficile 050-P50-2011]
gi|357543226|gb|EHJ25259.1| cytidine deaminase [Clostridium difficile 002-P50-2011]
gi|357545873|gb|EHJ27836.1| cytidine deaminase [Clostridium difficile 050-P50-2011]
Length = 140
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/111 (48%), Positives = 74/111 (66%), Gaps = 5/111 (4%)
Query: 12 LDPIEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTA 71
+D IE L L+ AR ++Y PYS +VGAALL + ++TGCN+E AS G T CAE+TA
Sbjct: 8 VDNIE--LLRLAEDARQHSYAPYSGFRVGAALLTKSGKVYTGCNIECASLGGTNCAERTA 65
Query: 72 ISKAISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVL 122
I KAISEG +IA+++ ++N+ PCG CRQVI EF S DI+++
Sbjct: 66 IFKAISEGDKDIHKIAIASDNSENNEQTYPCGICRQVIIEFGS---DIKII 113
>gi|197295558|ref|YP_002154099.1| cytidine deaminase [Burkholderia cenocepacia J2315]
gi|444360501|ref|ZP_21161725.1| cytidine deaminase [Burkholderia cenocepacia BC7]
gi|195945037|emb|CAR57662.1| cytidine deaminase [Burkholderia cenocepacia J2315]
gi|443599940|gb|ELT68179.1| cytidine deaminase [Burkholderia cenocepacia BC7]
Length = 129
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/100 (51%), Positives = 70/100 (70%), Gaps = 7/100 (7%)
Query: 26 ARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQT--KF 83
AR+ AY PYS+ +VGAAL +D T+F GCNVENASYG+ CAE+TA+ AI+ G F
Sbjct: 13 ARERAYAPYSRFKVGAALQARDGTVFHGCNVENASYGLCNCAERTALFAAIAAGYRPGDF 72
Query: 84 KRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLI 123
R+AV + D++ ++PCG+CRQVI E P DI+V++
Sbjct: 73 ARLAV---VGDTDGPIAPCGACRQVIIEIGKP--DIEVIL 107
>gi|238025068|ref|YP_002909300.1| Cytidine deaminase [Burkholderia glumae BGR1]
gi|237879733|gb|ACR32065.1| Cytidine deaminase [Burkholderia glumae BGR1]
Length = 129
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 71/106 (66%), Gaps = 1/106 (0%)
Query: 25 QARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQTKFK 84
+AR++AY PYS+ QVGAA+ D +F GCNVEN +YG++ CAE+TA+ AI+ G +
Sbjct: 12 RAREHAYAPYSRFQVGAAVTTHDGRVFAGCNVENGAYGLSNCAERTALFAAIAAG-CRPG 70
Query: 85 RIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQ 130
AV A++ D+ + ++PCG+CRQV+ E PA + + ++ R +
Sbjct: 71 DFAVLAVIGDTPEPIAPCGACRQVMVELGGPALSVVLANLRGARQE 116
>gi|372324528|ref|ZP_09519117.1| Cytidine deaminase [Oenococcus kitaharae DSM 17330]
gi|366983336|gb|EHN58735.1| Cytidine deaminase [Oenococcus kitaharae DSM 17330]
Length = 134
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 47/99 (47%), Positives = 65/99 (65%), Gaps = 3/99 (3%)
Query: 14 PIEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAIS 73
P L ++ + D AY PYS VGAALL D IF GCN+ENA++G T+CAE+TAI
Sbjct: 6 PEYDQLKQMADEELDRAYIPYSHFPVGAALLTSDGQIFQGCNIENAAFGSTMCAERTAIF 65
Query: 74 KAISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEF 112
A++ G KF+ + VS +N ++PCG+CRQV+AE+
Sbjct: 66 SAVAAGHQKFEALVVSG---KTNGAIAPCGACRQVMAEW 101
>gi|91779355|ref|YP_554563.1| cytidine deaminase [Burkholderia xenovorans LB400]
gi|385205603|ref|ZP_10032473.1| cytidine deaminase, homotetrameric [Burkholderia sp. Ch1-1]
gi|91692015|gb|ABE35213.1| cytidine deaminase [Burkholderia xenovorans LB400]
gi|385185494|gb|EIF34768.1| cytidine deaminase, homotetrameric [Burkholderia sp. Ch1-1]
Length = 129
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 48/96 (50%), Positives = 65/96 (67%), Gaps = 1/96 (1%)
Query: 26 ARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQTKFKR 85
AR+ AY PYSK +VGAALL +D +F GCNVENASYG+ CAE+TA AI+ G + +
Sbjct: 13 AREKAYAPYSKFKVGAALLTRDGKVFDGCNVENASYGLCNCAERTAFFSAIAAGYQR-DQ 71
Query: 86 IAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQV 121
A A++ D+ ++PCG+CRQVI E P I++
Sbjct: 72 FAALAVIGDTEGPIAPCGACRQVIIELGGPDLPIRL 107
>gi|323141989|ref|ZP_08076840.1| cytidine deaminase [Phascolarctobacterium succinatutens YIT 12067]
gi|322413521|gb|EFY04389.1| cytidine deaminase [Phascolarctobacterium succinatutens YIT 12067]
Length = 135
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/131 (38%), Positives = 78/131 (59%), Gaps = 8/131 (6%)
Query: 7 MEFSALDPIEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTIC 66
++ + L P + L + ++ AR NAY PYS VGAA+ C + I+ GCNVENASYG+ +C
Sbjct: 4 VKLNELSPAWRELYDAAVAARKNAYIPYSNFAVGAAVRCANGKIYGGCNVENASYGLCVC 63
Query: 67 AEKTAISKAISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKS 126
E+ AI A G+ + + V A D++ VSPCG+CRQV+ EF IQ +I+ +
Sbjct: 64 GERNAIFHAACAGEREMTELCVVA---DTSGPVSPCGACRQVMREFG-----IQTVILAN 115
Query: 127 DRSQVGLITID 137
+ + T++
Sbjct: 116 MKGDFKITTVE 126
>gi|389783875|ref|ZP_10195110.1| Cytidine deaminase [Rhodanobacter spathiphylli B39]
gi|388434079|gb|EIL91032.1| Cytidine deaminase [Rhodanobacter spathiphylli B39]
Length = 143
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/128 (41%), Positives = 82/128 (64%), Gaps = 2/128 (1%)
Query: 10 SALDPIE-QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAE 68
+A DP +L +L+ +AR+ AY PYS+ QVGAA+L +D F+GCNVENA+YG+ CAE
Sbjct: 6 AAFDPSSLHDLMSLARRARELAYAPYSRFQVGAAVLTRDGRQFSGCNVENAAYGLCNCAE 65
Query: 69 KTAISKAISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDR 128
+TA+ AI+ G + +A+ A++ D+ VSPCG+CRQV++E A + + + D
Sbjct: 66 RTALFSAIAAGCRRGDFVAL-AVIADTPDPVSPCGACRQVMSELCHDAMPVLLGNLHGDT 124
Query: 129 SQVGLITI 136
Q + +
Sbjct: 125 EQTSVAAL 132
>gi|255656418|ref|ZP_05401827.1| cytidine deaminase [Clostridium difficile QCD-23m63]
Length = 133
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/111 (48%), Positives = 74/111 (66%), Gaps = 5/111 (4%)
Query: 12 LDPIEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTA 71
+D IE L L+ AR ++Y PYS +VGAALL + ++TGCN+E AS G T CAE+TA
Sbjct: 1 MDNIE--LLRLAEDARQHSYAPYSSFRVGAALLTKSGKVYTGCNIECASLGGTNCAERTA 58
Query: 72 ISKAISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVL 122
I KAISEG +IA+++ ++N+ PCG CRQVI EF S DI+++
Sbjct: 59 IFKAISEGDKDIYKIAIASDNSENNEQTYPCGICRQVIIEFGS---DIKII 106
>gi|326389567|ref|ZP_08211133.1| cytidine deaminase [Thermoanaerobacter ethanolicus JW 200]
gi|392938937|ref|ZP_10304581.1| cytidine deaminase, homotetrameric [Thermoanaerobacter siderophilus
SR4]
gi|325994282|gb|EGD52708.1| cytidine deaminase [Thermoanaerobacter ethanolicus JW 200]
gi|392290687|gb|EIV99130.1| cytidine deaminase, homotetrameric [Thermoanaerobacter siderophilus
SR4]
Length = 135
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/120 (41%), Positives = 77/120 (64%), Gaps = 6/120 (5%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
+ L +L+ +AR+ AY PYS +VGA +L ++ + GCN+ENASYG+T CAE+TA+ A
Sbjct: 7 EKLIDLAKEARERAYVPYSHFKVGACVLTENGKTYQGCNIENASYGLTNCAERTALFNAY 66
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQVGLITI 136
+ G+ K K IAV A D+ VSPCG+CRQV+ E + V+I+ + + ++T+
Sbjct: 67 ANGERKLKAIAVVA---DTEGPVSPCGACRQVMMELGG---EDMVVILSNMKGDYAVVTV 120
>gi|65319213|ref|ZP_00392172.1| COG0295: Cytidine deaminase [Bacillus anthracis str. A2012]
Length = 111
Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 47/87 (54%), Positives = 64/87 (73%), Gaps = 3/87 (3%)
Query: 29 NAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQTKFKRIAV 88
AY PYSK VGAAL+ ++ I+TGCN+ENASYG+ CAE+TAI KA+SEG+ F + +
Sbjct: 16 KAYIPYSKFPVGAALVTKEGKIYTGCNIENASYGLCNCAERTAIFKAVSEGERDFSYLVI 75
Query: 89 SAILPDSNKFVSPCGSCRQVIAEFSSP 115
+ +++ +SPCG+CRQVIAEF P
Sbjct: 76 TG---ETDGPISPCGACRQVIAEFCDP 99
>gi|342320023|gb|EGU11967.1| Cytidine deaminase [Rhodotorula glutinis ATCC 204091]
Length = 173
Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/126 (43%), Positives = 77/126 (61%), Gaps = 7/126 (5%)
Query: 1 MVGHDIMEFSALDPIEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENAS 60
MV ++ + S D + L + ++ ARD +Y PYS +VGA LL + G NVE AS
Sbjct: 1 MVAYNPLPLSPSD--RKTLISSALSARDGSYSPYSNFRVGACLLTDEGEFVRGANVECAS 58
Query: 61 YGMTICAEKTAISKAISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQ 120
YG ICAE+TAI K +SEG+ +F +AV++ D N VSPCG CRQV+ EF ++
Sbjct: 59 YGGAICAERTAIVKGVSEGKRRFVALAVTS---DVNGMVSPCGICRQVLREFC--PLEMP 113
Query: 121 VLIVKS 126
VL++ S
Sbjct: 114 VLLIPS 119
>gi|373455524|ref|ZP_09547355.1| cytidine deaminase [Dialister succinatiphilus YIT 11850]
gi|371934786|gb|EHO62564.1| cytidine deaminase [Dialister succinatiphilus YIT 11850]
Length = 133
Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 46/99 (46%), Positives = 64/99 (64%), Gaps = 3/99 (3%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
Q+L + +AR +Y PYS+ VGAAL+ +D TI+ GCNVEN SYG +CAE+ A+ A+
Sbjct: 7 QSLLEKAEEARKKSYSPYSRYPVGAALMAKDGTIYAGCNVENVSYGAALCAERNALGSAV 66
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSP 115
++GQ F I AI+ + PCG CRQV++EF P
Sbjct: 67 ADGQRDFTAI---AIIGSHEDYTMPCGICRQVLSEFHVP 102
>gi|326203512|ref|ZP_08193376.1| cytidine deaminase [Clostridium papyrosolvens DSM 2782]
gi|325986332|gb|EGD47164.1| cytidine deaminase [Clostridium papyrosolvens DSM 2782]
Length = 129
Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/99 (51%), Positives = 69/99 (69%), Gaps = 4/99 (4%)
Query: 16 EQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKA 75
+ LA + +A D AY PYSK +VGAALL ++TGCNVE AS+G T CAE+TAI KA
Sbjct: 3 DMELAACARKAMDTAYAPYSKFRVGAALLTASGKVYTGCNVEIASFGATNCAERTAIFKA 62
Query: 76 IS-EGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFS 113
+S EG+ K +IA+++ D ++ PCG CRQV+AEF+
Sbjct: 63 VSEEGRVKIDKIAIAS---DDKDYIYPCGICRQVMAEFA 98
>gi|289450073|ref|YP_003474973.1| cytidine deaminase [Clostridiales genomosp. BVAB3 str. UPII9-5]
gi|289184620|gb|ADC91045.1| cytidine deaminase [Clostridiales genomosp. BVAB3 str. UPII9-5]
Length = 136
Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/116 (42%), Positives = 71/116 (61%), Gaps = 3/116 (2%)
Query: 18 NLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAIS 77
L +++ AR AY PYS +VGAALL D ++ GCN+ENA+Y T CAE+TA KA++
Sbjct: 5 ELLQMALDARKRAYTPYSHFKVGAALLTADGKVYQGCNIENAAYTPTNCAERTAFFKAVA 64
Query: 78 EGQTKFKRIAVSAILP--DSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQV 131
EG+ F IAV ++++F PCG CRQV+ EF PA ++++ + V
Sbjct: 65 EGERSFTAIAVVGAPEGQEADQFCPPCGVCRQVMEEFCDPAA-FRIILADPEHGTV 119
>gi|254571689|ref|XP_002492954.1| Cytidine deaminase [Komagataella pastoris GS115]
gi|238032752|emb|CAY70775.1| Cytidine deaminase [Komagataella pastoris GS115]
gi|328353033|emb|CCA39431.1| cytidine deaminase [Komagataella pastoris CBS 7435]
Length = 156
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 50/123 (40%), Positives = 72/123 (58%), Gaps = 3/123 (2%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
+ L +++AR+ +Y PYS +VG ++L D+T G NVENASYG ICAE+T I+ A+
Sbjct: 26 ETLKTKALEARNLSYSPYSNFKVGCSILLPDNTFIKGANVENASYGACICAERTTITHAV 85
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQVGLITI 136
G FK +AVS L SPCG CRQVI EF+ + + + D S+ +T+
Sbjct: 86 MLGHRSFKALAVSTEL---ESIASPCGICRQVIREFADEKLTLPIFMFNKDGSKFVKMTL 142
Query: 137 DGM 139
D +
Sbjct: 143 DDL 145
>gi|126700054|ref|YP_001088951.1| cytidine deaminase (Cytidine aminohydrolase) (CDA) [Clostridium
difficile 630]
gi|254976031|ref|ZP_05272503.1| cytidine deaminase [Clostridium difficile QCD-66c26]
gi|255093419|ref|ZP_05322897.1| cytidine deaminase [Clostridium difficile CIP 107932]
gi|255101597|ref|ZP_05330574.1| cytidine deaminase [Clostridium difficile QCD-63q42]
gi|255307466|ref|ZP_05351637.1| cytidine deaminase [Clostridium difficile ATCC 43255]
gi|255315164|ref|ZP_05356747.1| cytidine deaminase [Clostridium difficile QCD-76w55]
gi|255517833|ref|ZP_05385509.1| cytidine deaminase [Clostridium difficile QCD-97b34]
gi|255650949|ref|ZP_05397851.1| cytidine deaminase [Clostridium difficile QCD-37x79]
gi|260684018|ref|YP_003215303.1| cytidine deaminase [Clostridium difficile CD196]
gi|260687678|ref|YP_003218812.1| cytidine deaminase [Clostridium difficile R20291]
gi|306520829|ref|ZP_07407176.1| cytidine deaminase [Clostridium difficile QCD-32g58]
gi|384361661|ref|YP_006199513.1| cytidine deaminase [Clostridium difficile BI1]
gi|115251491|emb|CAJ69324.1| Cytidine deaminase (Cytidine aminohydrolase) (CDA) [Clostridium
difficile 630]
gi|260210181|emb|CBA64376.1| cytidine deaminase [Clostridium difficile CD196]
gi|260213695|emb|CBE05567.1| cytidine deaminase [Clostridium difficile R20291]
Length = 133
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 54/111 (48%), Positives = 74/111 (66%), Gaps = 5/111 (4%)
Query: 12 LDPIEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTA 71
+D IE L L+ AR ++Y PYS +VGAALL + ++TGCN+E AS G T CAE+TA
Sbjct: 1 MDNIE--LLRLAEDARQHSYAPYSGFRVGAALLTKSGKVYTGCNIECASLGGTNCAERTA 58
Query: 72 ISKAISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVL 122
I KAISEG +IA+++ ++N+ PCG CRQVI EF S DI+++
Sbjct: 59 IFKAISEGDKDIYKIAIASDNSENNEQTYPCGICRQVIIEFGS---DIKII 106
>gi|312127193|ref|YP_003992067.1| cytidine deaminase [Caldicellulosiruptor hydrothermalis 108]
gi|311777212|gb|ADQ06698.1| cytidine deaminase [Caldicellulosiruptor hydrothermalis 108]
Length = 138
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 51/105 (48%), Positives = 75/105 (71%), Gaps = 6/105 (5%)
Query: 12 LDPIEQNLA---NLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAE 68
LD +++ A NL+ +A+ AY PYS+ +VGAA + ++TGCN+ENASY ++ICAE
Sbjct: 4 LDRVDEQTAYFLNLAKEAQKKAYAPYSRFKVGAAAVGSSRKVYTGCNIENASYPLSICAE 63
Query: 69 KTAISKAISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFS 113
+ A+ KAISEG++K K A+ I P+ N+ +SPCG+CRQVI E +
Sbjct: 64 RVALFKAISEGESKIK--ALYIIGPE-NEPISPCGACRQVIFELA 105
>gi|302391409|ref|YP_003827229.1| cytidine deaminase [Acetohalobium arabaticum DSM 5501]
gi|302203486|gb|ADL12164.1| cytidine deaminase [Acetohalobium arabaticum DSM 5501]
Length = 135
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 53/112 (47%), Positives = 73/112 (65%), Gaps = 6/112 (5%)
Query: 13 DPIEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAI 72
D ++ L +I AR NAY PYS+ VGAA+L ++ I+ GCN+EN SY MT CAE+TAI
Sbjct: 3 DKLQDKLIKAAINARKNAYVPYSEFAVGAAVLTEEGKIYGGCNIENISYSMTNCAERTAI 62
Query: 73 SKAIS-EGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLI 123
KA+S E TK + I AI+ D+ PCG+CRQV+ EF D++V++
Sbjct: 63 FKAVSNEEDTKIRAI---AIVADTKHPCVPCGACRQVMIEFGDR--DLEVIM 109
>gi|296450135|ref|ZP_06891896.1| cytidine deaminase [Clostridium difficile NAP08]
gi|296878516|ref|ZP_06902521.1| cytidine deaminase [Clostridium difficile NAP07]
gi|296260898|gb|EFH07732.1| cytidine deaminase [Clostridium difficile NAP08]
gi|296430323|gb|EFH16165.1| cytidine deaminase [Clostridium difficile NAP07]
Length = 140
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 54/111 (48%), Positives = 74/111 (66%), Gaps = 5/111 (4%)
Query: 12 LDPIEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTA 71
+D IE L L+ AR ++Y PYS +VGAALL + ++TGCN+E AS G T CAE+TA
Sbjct: 8 VDNIE--LLRLAEDARQHSYAPYSSFRVGAALLTKSGKVYTGCNIECASLGGTNCAERTA 65
Query: 72 ISKAISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVL 122
I KAISEG +IA+++ ++N+ PCG CRQVI EF S DI+++
Sbjct: 66 IFKAISEGDKDIYKIAIASDNSENNEQTYPCGICRQVIIEFGS---DIKII 113
>gi|32477209|ref|NP_870203.1| cytidine deaminase [Rhodopirellula baltica SH 1]
gi|32447760|emb|CAD77278.1| cytidine deaminase [Rhodopirellula baltica SH 1]
Length = 166
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 49/98 (50%), Positives = 63/98 (64%), Gaps = 5/98 (5%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
Q L +I ARD+AY P+S VGAALL D I GCNVENASY +T CAE+TA+ A+
Sbjct: 39 QRLIQAAISARDHAYAPHSHFYVGAALLTHDGRIVEGCNVENASYSLTQCAERTAVCTAV 98
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSS 114
+ G F +A+++I PCG+CRQV+AEF S
Sbjct: 99 AGGYRMFHAVAIASI-----GGAMPCGACRQVLAEFGS 131
>gi|402587634|gb|EJW81569.1| cytidine deaminase [Wuchereria bancrofti]
Length = 133
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 49/101 (48%), Positives = 70/101 (69%), Gaps = 7/101 (6%)
Query: 26 ARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQTKFKR 85
A D AYCPYSK VGAALL ++ + TG NVENASYG TICAE++A+++A++EG +F+
Sbjct: 15 AMDRAYCPYSKFTVGAALLTKNGKVITGGNVENASYGGTICAERSAVTRAVAEGYREFQA 74
Query: 86 IAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKS 126
+AV A + +PCG CRQ + EF D++V+++ S
Sbjct: 75 VAVCATPAEPT---APCGLCRQFLIEFG----DMKVIMMSS 108
>gi|417960935|ref|ZP_12603439.1| Cytidine deaminase [Candidatus Arthromitus sp. SFB-2]
gi|380334774|gb|EIA25117.1| Cytidine deaminase [Candidatus Arthromitus sp. SFB-2]
Length = 101
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 49/97 (50%), Positives = 67/97 (69%), Gaps = 3/97 (3%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
QNL + +++ R+ AY PYSK VGA++L ++ IFTGCN+ENAS G T CAE+TA+ KA+
Sbjct: 7 QNLIDNALKVREKAYVPYSKFPVGASILFKNFEIFTGCNIENASLGATNCAERTAVFKAV 66
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFS 113
SEG +K I ++ F PCG CRQV+AEF+
Sbjct: 67 SEG---YKEIHAVCVVGSFCDFTYPCGICRQVLAEFA 100
>gi|383755068|ref|YP_005433971.1| putative cytidine deaminase [Selenomonas ruminantium subsp.
lactilytica TAM6421]
gi|381367120|dbj|BAL83948.1| putative cytidine deaminase [Selenomonas ruminantium subsp.
lactilytica TAM6421]
Length = 126
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 48/100 (48%), Positives = 70/100 (70%), Gaps = 3/100 (3%)
Query: 16 EQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKA 75
++ L + + R+ +Y PYSK +VGAA+L + ++ GCNVEN+S+ MT CAE+TAI KA
Sbjct: 3 DKELIAAAKKYREFSYSPYSKFKVGAAVLTKKGNVYGGCNVENSSFPMTNCAERTAIFKA 62
Query: 76 ISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSP 115
+SEG+ +F+ IA+ A P+ SPCG+CRQV+ EF P
Sbjct: 63 VSEGEREFEAIALIADTPEP---CSPCGACRQVMVEFKIP 99
>gi|182419200|ref|ZP_02950453.1| cytidine deaminase [Clostridium butyricum 5521]
gi|237667058|ref|ZP_04527042.1| cytidine deaminase [Clostridium butyricum E4 str. BoNT E BL5262]
gi|182376840|gb|EDT74411.1| cytidine deaminase [Clostridium butyricum 5521]
gi|237655406|gb|EEP52962.1| cytidine deaminase [Clostridium butyricum E4 str. BoNT E BL5262]
Length = 131
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 47/111 (42%), Positives = 73/111 (65%), Gaps = 5/111 (4%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
+NL ++ R+ AY PYS +VGAA+L + ++ GCN+ENAS+G T CAE+TAI +
Sbjct: 4 KNLVKTALDYRERAYAPYSNFKVGAAVLFESGNVYGGCNIENASFGATNCAERTAIFTGV 63
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSD 127
+ G+TK K IA++ + ++ PCG CRQV+ EF+ D V++VK++
Sbjct: 64 ASGETKIKVIAIAG---STEEYTYPCGICRQVLCEFADG--DAAVILVKNE 109
>gi|331082918|ref|ZP_08332039.1| cytidine deaminase [Lachnospiraceae bacterium 6_1_63FAA]
gi|330400059|gb|EGG79712.1| cytidine deaminase [Lachnospiraceae bacterium 6_1_63FAA]
Length = 137
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 48/107 (44%), Positives = 70/107 (65%), Gaps = 3/107 (2%)
Query: 25 QARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQTKFK 84
+AR AY PYS +VGAALL + ++ GCN+ENA+Y T CAE+TA KA+SEG+ +F+
Sbjct: 12 KARLKAYTPYSNFKVGAALLTKSGKVYLGCNIENATYTPTNCAERTAFFKAVSEGEREFE 71
Query: 85 RIAVSAIL--PDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRS 129
+IA+ D+N SPCG CRQV+ EF P + Q+++ + +
Sbjct: 72 KIAIVGAKDGEDANVMCSPCGVCRQVMMEFCDPK-EFQIILANGENT 117
>gi|423092466|ref|ZP_17080270.1| cytidine deaminase [Clostridium difficile 70-100-2010]
gi|357553968|gb|EHJ35704.1| cytidine deaminase [Clostridium difficile 70-100-2010]
Length = 140
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 54/111 (48%), Positives = 74/111 (66%), Gaps = 5/111 (4%)
Query: 12 LDPIEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTA 71
+D IE L L+ AR ++Y PYS +VGAALL + ++TGCN+E AS G T CAE+TA
Sbjct: 8 VDNIE--LLRLAEDARQHSYAPYSGFRVGAALLTKSGKVYTGCNIECASLGGTNCAERTA 65
Query: 72 ISKAISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVL 122
I KAISEG +IA+++ ++N+ PCG CRQVI EF S DI+++
Sbjct: 66 IFKAISEGDKDIYKIAIASDNSENNEQTYPCGICRQVIIEFGS---DIKII 113
>gi|167770292|ref|ZP_02442345.1| hypothetical protein ANACOL_01635 [Anaerotruncus colihominis DSM
17241]
gi|167667614|gb|EDS11744.1| cytidine deaminase [Anaerotruncus colihominis DSM 17241]
Length = 145
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 48/115 (41%), Positives = 70/115 (60%), Gaps = 5/115 (4%)
Query: 16 EQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKA 75
+Q L L+ +AR+++Y PYS VGAALL ++ GCNVENASYG ICAE+ A KA
Sbjct: 3 KQELIKLAFEAREHSYSPYSGFCVGAALLTSGGKVYQGCNVENASYGAAICAERNAAMKA 62
Query: 76 ISEGQTKFKRIAVSAI----LPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKS 126
+ +G+ +F+ IA+ P+ F PCG CRQ + EF P ++V + ++
Sbjct: 63 VYDGERRFEAIAICGYPRGGRPEDAGFAYPCGICRQFLREFCDPK-QMKVYVART 116
>gi|449134875|ref|ZP_21770339.1| cytidine deaminase [Rhodopirellula europaea 6C]
gi|448886354|gb|EMB16761.1| cytidine deaminase [Rhodopirellula europaea 6C]
Length = 147
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 49/98 (50%), Positives = 63/98 (64%), Gaps = 5/98 (5%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
Q L +I ARD+AY P+S VGAALL D I GCNVENASY +T CAE+TA+ A+
Sbjct: 20 QRLIQAAISARDHAYAPHSHFYVGAALLTHDGRIVEGCNVENASYSLTQCAERTAVCSAV 79
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSS 114
+ G F +A+++I PCG+CRQV+AEF S
Sbjct: 80 AGGYRMFHAVAIASI-----GGAMPCGACRQVLAEFGS 112
>gi|167038222|ref|YP_001665800.1| cytidine deaminase [Thermoanaerobacter pseudethanolicus ATCC 33223]
gi|167039068|ref|YP_001662053.1| cytidine deaminase [Thermoanaerobacter sp. X514]
gi|256751565|ref|ZP_05492441.1| cytidine deaminase [Thermoanaerobacter ethanolicus CCSD1]
gi|300913342|ref|ZP_07130659.1| cytidine deaminase [Thermoanaerobacter sp. X561]
gi|307723644|ref|YP_003903395.1| cytidine deaminase [Thermoanaerobacter sp. X513]
gi|320116632|ref|YP_004186791.1| cytidine deaminase [Thermoanaerobacter brockii subsp. finnii Ako-1]
gi|166853308|gb|ABY91717.1| cytidine deaminase [Thermoanaerobacter sp. X514]
gi|166857056|gb|ABY95464.1| cytidine deaminase [Thermoanaerobacter pseudethanolicus ATCC 33223]
gi|256749515|gb|EEU62543.1| cytidine deaminase [Thermoanaerobacter ethanolicus CCSD1]
gi|300890027|gb|EFK85172.1| cytidine deaminase [Thermoanaerobacter sp. X561]
gi|307580705|gb|ADN54104.1| cytidine deaminase [Thermoanaerobacter sp. X513]
gi|319929723|gb|ADV80408.1| cytidine deaminase [Thermoanaerobacter brockii subsp. finnii Ako-1]
Length = 135
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 51/120 (42%), Positives = 74/120 (61%), Gaps = 6/120 (5%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
+ L L+ AR+ AY PYS +VGA +L +D + GCN+ENASYG+T CAE+TA+ A
Sbjct: 7 EKLVELAKDAREKAYVPYSHFKVGACVLTEDGKAYQGCNIENASYGLTNCAERTALFSAY 66
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQVGLITI 136
+ G K K IAV A D+ VSPCG+CRQV+ E + V+I+ + + ++T+
Sbjct: 67 ANGDRKLKAIAVVA---DTEGPVSPCGACRQVMMELGG---EDMVVILSNMKGDYAVVTV 120
>gi|417303193|ref|ZP_12090255.1| cytidine deaminase [Rhodopirellula baltica WH47]
gi|421610810|ref|ZP_16051976.1| cytidine deaminase [Rhodopirellula baltica SH28]
gi|440712619|ref|ZP_20893235.1| cytidine deaminase [Rhodopirellula baltica SWK14]
gi|327540495|gb|EGF27077.1| cytidine deaminase [Rhodopirellula baltica WH47]
gi|408498594|gb|EKK03087.1| cytidine deaminase [Rhodopirellula baltica SH28]
gi|436442774|gb|ELP35885.1| cytidine deaminase [Rhodopirellula baltica SWK14]
Length = 147
Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 49/98 (50%), Positives = 63/98 (64%), Gaps = 5/98 (5%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
Q L +I ARD+AY P+S VGAALL D I GCNVENASY +T CAE+TA+ A+
Sbjct: 20 QRLIQAAISARDHAYAPHSHFYVGAALLTHDGRIVEGCNVENASYSLTQCAERTAVCTAV 79
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSS 114
+ G F +A+++I PCG+CRQV+AEF S
Sbjct: 80 AGGYRMFHAVAIASI-----GGAMPCGACRQVLAEFGS 112
>gi|312144000|ref|YP_003995446.1| cytidine deaminase [Halanaerobium hydrogeniformans]
gi|311904651|gb|ADQ15092.1| cytidine deaminase [Halanaerobium hydrogeniformans]
Length = 140
Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 46/117 (39%), Positives = 79/117 (67%), Gaps = 3/117 (2%)
Query: 15 IEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISK 74
I++ L +++A++NAY PYS +GAA+L D +I+ G N+ENAS+ +T CAE++AI
Sbjct: 5 IKRELLKSALKAQENAYVPYSNFPLGAAVLMDDGSIYNGANIENASFSLTNCAERSAIFS 64
Query: 75 AISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQV 131
AIS+G+ K K + ++ ++ K ++PCG+CRQVI EF+ +I ++ K + ++
Sbjct: 65 AISDGKEKIKAL---LLVSNTQKTITPCGACRQVINEFADGEIEIIMVTEKGGKEKI 118
>gi|374583191|ref|ZP_09656285.1| cytidine deaminase, homotetrameric [Desulfosporosinus youngiae DSM
17734]
gi|374419273|gb|EHQ91708.1| cytidine deaminase, homotetrameric [Desulfosporosinus youngiae DSM
17734]
Length = 154
Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 51/102 (50%), Positives = 69/102 (67%), Gaps = 6/102 (5%)
Query: 26 ARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQTKFKR 85
A ++AY PYS VG+A + TI++GCNVEN+SYG+TICAE+ AI KAI+ G+ + K
Sbjct: 35 AYEHAYVPYSHYPVGSAAVFSSGTIYSGCNVENSSYGLTICAERNAIFKAIARGERELKG 94
Query: 86 IAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSD 127
IA++ S+ F SPCG+CRQVI EF A D V++V
Sbjct: 95 IAIAV---PSDVFPSPCGACRQVIREF---AVDCPVILVNGQ 130
>gi|389792912|ref|ZP_10196093.1| cytidine deaminase [Rhodanobacter fulvus Jip2]
gi|388435443|gb|EIL92346.1| cytidine deaminase [Rhodanobacter fulvus Jip2]
Length = 136
Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 52/124 (41%), Positives = 79/124 (63%), Gaps = 6/124 (4%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
++L L+ +ARD AY PYSK +VGAALL +D F GCNVENA+YG+ CAE+TA+ A+
Sbjct: 9 EDLLALAREARDRAYAPYSKFKVGAALLTRDGRPFQGCNVENAAYGLCNCAERTALFNAV 68
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSD-RSQVGLIT 135
+ G + A A++ D++ SPCG+CRQV+ E CD Q+ ++ ++ R + T
Sbjct: 69 AAG-CQPGDFAALAVITDTDGVASPCGACRQVMVEL----CDAQMPVLLANLRGDISETT 123
Query: 136 IDGM 139
+ +
Sbjct: 124 VGAL 127
>gi|345016915|ref|YP_004819268.1| cytidine deaminase [Thermoanaerobacter wiegelii Rt8.B1]
gi|344032258|gb|AEM77984.1| cytidine deaminase [Thermoanaerobacter wiegelii Rt8.B1]
Length = 135
Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 51/115 (44%), Positives = 71/115 (61%), Gaps = 3/115 (2%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
+ L L+ +AR+ AY PYS +VGA +L +D + GCN+ENASYG+T CAE+TA+ A
Sbjct: 7 EKLIELAKEAREKAYVPYSHFKVGACVLTEDGKTYQGCNIENASYGLTNCAERTALFSAY 66
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQV 131
+ G K K IAV A D+ VSPCG+CRQV+ E + + +K D + V
Sbjct: 67 ANGDRKLKAIAVVA---DTEGPVSPCGACRQVMLELGGEDMTVILSNMKGDYAVV 118
>gi|392862251|gb|EAS37117.2| cytidine deaminase [Coccidioides immitis RS]
Length = 185
Score = 99.8 bits (247), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 49/95 (51%), Positives = 65/95 (68%), Gaps = 5/95 (5%)
Query: 23 SIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQTK 82
+I A+D AYCPYSK +VGA+LL +D T F G NVENASY + ICAEK A++ G
Sbjct: 63 AIGAKDVAYCPYSKFRVGASLLAEDGTFFVGANVENASYPVGICAEKCVFGTAVTAGHRS 122
Query: 83 FKRIAVSA-ILPDSNKFVSPCGSCRQVIAEFSSPA 116
FK +AV++ I+P + SPCGSCRQ + +F P+
Sbjct: 123 FKAVAVASDIIPGT----SPCGSCRQFMRQFCPPS 153
>gi|355574697|ref|ZP_09044333.1| cytidine deaminase [Olsenella sp. oral taxon 809 str. F0356]
gi|354818173|gb|EHF02665.1| cytidine deaminase [Olsenella sp. oral taxon 809 str. F0356]
Length = 146
Score = 99.8 bits (247), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 55/116 (47%), Positives = 73/116 (62%), Gaps = 5/116 (4%)
Query: 16 EQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKA 75
E L +I AR+ AY PYS VGAALL + ++ GCN+ENASY T CAE+TA KA
Sbjct: 3 EGALVREAIAAREEAYAPYSHFSVGAALLDSEGRVWRGCNIENASYTPTNCAERTAFFKA 62
Query: 76 ISEGQTKFKRIAV---SAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDR 128
+SEG +F+ IA+ + LP SN + +PCG CRQV+ EF P +V++ S R
Sbjct: 63 VSEGAREFEAIAIVGGAEGLPISN-WCAPCGVCRQVMEEFCDPR-SFRVVLAASPR 116
>gi|157273386|gb|ABV27285.1| cytidine deaminase [Candidatus Chloracidobacterium thermophilum]
Length = 142
Score = 99.8 bits (247), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 47/103 (45%), Positives = 70/103 (67%), Gaps = 6/103 (5%)
Query: 25 QARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQTKFK 84
+AR+ AY PYS VGAA+ Q ++TGCN+ENAS+G+T+CAE+ A+ KA+SEG+ +F+
Sbjct: 14 KAREYAYAPYSGFSVGAAIQAQSGQLYTGCNIENASFGLTVCAEQVALFKALSEGERQFE 73
Query: 85 RIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSD 127
+A++ D+ PCG+CRQV+ EF DI+V+ S
Sbjct: 74 AVAIAT---DAATPTPPCGACRQVLWEFCG---DIRVISASSQ 110
>gi|397691453|ref|YP_006528707.1| Cytidine deaminase [Melioribacter roseus P3M]
gi|395812945|gb|AFN75694.1| Cytidine deaminase [Melioribacter roseus P3M]
Length = 135
Score = 99.8 bits (247), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 52/137 (37%), Positives = 86/137 (62%), Gaps = 9/137 (6%)
Query: 16 EQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKA 75
++ L + +++A AY PYS VGAAL+ + I+ G N+EN+SYG+TICAE+TA +A
Sbjct: 7 KEQLISKAVEAARKAYAPYSNFHVGAALITKSGKIYLGANIENSSYGLTICAERTAAFRA 66
Query: 76 ISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQVGLIT 135
+ EG+ +F I AI+ DS F PCG+CRQV++E D+ V I+ + + ++ +T
Sbjct: 67 VLEGEKEFDAI---AIVSDSEDFTPPCGACRQVLSELCGK--DLSV-IMNNKKGEIKEMT 120
Query: 136 IDGMYLTLHCCWERGNL 152
++ + L +++ NL
Sbjct: 121 LEEL---LPFSFDKENL 134
>gi|114567082|ref|YP_754236.1| cytidine deaminase [Syntrophomonas wolfei subsp. wolfei str.
Goettingen]
gi|114338017|gb|ABI68865.1| cytidine deaminase [Syntrophomonas wolfei subsp. wolfei str.
Goettingen]
Length = 132
Score = 99.8 bits (247), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 46/97 (47%), Positives = 67/97 (69%), Gaps = 3/97 (3%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
+ L + +A+ NAY PYS QVGAALL ++TG NVEN+SYG++ICAE+ A+ KA+
Sbjct: 5 EELLKRAREAQKNAYAPYSNFQVGAALLSAGGKVYTGSNVENSSYGLSICAERAAVFKAV 64
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFS 113
++G+ F A+ A++ +V PCG+C QV+AEFS
Sbjct: 65 NDGERDF---ALLAVVASGQGYVFPCGACLQVLAEFS 98
>gi|56963445|ref|YP_175176.1| cytidine deaminase [Bacillus clausii KSM-K16]
gi|56909688|dbj|BAD64215.1| cytidine deaminase [Bacillus clausii KSM-K16]
Length = 138
Score = 99.4 bits (246), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 51/115 (44%), Positives = 70/115 (60%), Gaps = 3/115 (2%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
+ L +I AR +AY PYS VGAALL +D ++ G N+ENA+Y + CAE+TA+ KA
Sbjct: 4 ETLMQHAITARKDAYVPYSSFAVGAALLLEDGSVVLGGNIENAAYSLANCAERTALFKAY 63
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQV 131
GQ FK +AV+A P VSPCG+CRQV+AE P + + +K + Q
Sbjct: 64 RAGQKPFKAMAVAADTPGP---VSPCGACRQVLAELCPPEMPVYLCNLKGNVKQT 115
>gi|154505034|ref|ZP_02041772.1| hypothetical protein RUMGNA_02544 [Ruminococcus gnavus ATCC 29149]
gi|336432803|ref|ZP_08612634.1| cytidine deaminase [Lachnospiraceae bacterium 2_1_58FAA]
gi|153794513|gb|EDN76933.1| cytidine deaminase [Ruminococcus gnavus ATCC 29149]
gi|336018085|gb|EGN47838.1| cytidine deaminase [Lachnospiraceae bacterium 2_1_58FAA]
Length = 153
Score = 99.4 bits (246), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 47/110 (42%), Positives = 73/110 (66%), Gaps = 3/110 (2%)
Query: 16 EQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKA 75
++ L L+ + ++ +Y PYS QVGAALL ++ T++ GCN+ENA+Y T CAE+TA+ +A
Sbjct: 16 KEELIRLAYEGKERSYSPYSGFQVGAALLAENGTVYLGCNIENAAYSATNCAERTALFQA 75
Query: 76 ISEGQTKFKRIAVSAILPDSNK--FVSPCGSCRQVIAEFSSPACDIQVLI 123
+SEG +F+ IA+ S K +PCG CRQV+ EF P + Q+++
Sbjct: 76 VSEGVKEFRAIAIVGGPKGSKKGELCAPCGVCRQVMMEFCDPK-EFQIVL 124
>gi|335429385|ref|ZP_08556283.1| cytidine deaminase (cytidine aminohydrolase) [Haloplasma
contractile SSD-17B]
gi|334889395|gb|EGM27680.1| cytidine deaminase (cytidine aminohydrolase) [Haloplasma
contractile SSD-17B]
Length = 132
Score = 99.4 bits (246), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 48/104 (46%), Positives = 67/104 (64%), Gaps = 1/104 (0%)
Query: 16 EQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKA 75
+ L +I+ RDNAY PYS QVG A+L +D ++TG NVENASYG++ CAE++A A
Sbjct: 3 HEELIKKAIEVRDNAYAPYSNFQVGCAILLKDGQVYTGANVENASYGLSNCAERSAFFAA 62
Query: 76 ISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDI 119
S+G + + AI+ D+ F SPCG+CRQVI E + +I
Sbjct: 63 YSDGYRQ-DDVKALAIVADTESFCSPCGACRQVIHELVNEDTEI 105
>gi|312793108|ref|YP_004026031.1| cytidine deaminase [Caldicellulosiruptor kristjanssonii 177R1B]
gi|312180248|gb|ADQ40418.1| cytidine deaminase [Caldicellulosiruptor kristjanssonii 177R1B]
Length = 138
Score = 99.4 bits (246), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 53/123 (43%), Positives = 82/123 (66%), Gaps = 9/123 (7%)
Query: 12 LDPIEQN---LANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAE 68
LD I++ NL+ +A++ AY PYS+ +VGAA + ++TGCN+ENASY +++CAE
Sbjct: 4 LDKIDEQTVYFLNLAKEAQEKAYAPYSRFRVGAAAVGSSSKVYTGCNIENASYPLSMCAE 63
Query: 69 KTAISKAISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDR 128
+ A+ KAISEG+++ K A+ I P+ N+ +SPCG+CRQVI E A D + + D
Sbjct: 64 RVALFKAISEGESEIK--ALYIIGPE-NEPISPCGACRQVIFEL---AKDSTIYLSNRDM 117
Query: 129 SQV 131
++V
Sbjct: 118 TKV 120
>gi|255505322|ref|ZP_05345433.3| cytidine deaminase [Bryantella formatexigens DSM 14469]
gi|255268815|gb|EET62020.1| cytidine deaminase [Marvinbryantia formatexigens DSM 14469]
Length = 145
Score = 99.4 bits (246), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 49/93 (52%), Positives = 63/93 (67%), Gaps = 2/93 (2%)
Query: 25 QARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQTKFK 84
+AR +AY PYS QVGAALL + I+ GCN+ENA+Y T CAE+TA KAI +G+ +F
Sbjct: 20 KARKHAYVPYSHFQVGAALLTKSGRIYHGCNIENAAYTPTNCAERTAFFKAIYDGEREFD 79
Query: 85 RIAV--SAILPDSNKFVSPCGSCRQVIAEFSSP 115
+IAV A D ++ SPCG CRQV+ EF P
Sbjct: 80 KIAVVGGAEGTDGDELCSPCGVCRQVMMEFCDP 112
>gi|239827760|ref|YP_002950384.1| cytidine deaminase [Geobacillus sp. WCH70]
gi|239808053|gb|ACS25118.1| cytidine deaminase [Geobacillus sp. WCH70]
Length = 159
Score = 99.4 bits (246), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 47/88 (53%), Positives = 63/88 (71%), Gaps = 3/88 (3%)
Query: 25 QARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQTKFK 84
+AR AY PYSK +VGAALL +D ++ GCN+ENA+Y M CAE+TA+ KA SEG +F
Sbjct: 39 KARGYAYVPYSKFKVGAALLTKDGKVYRGCNIENAAYSMCNCAERTALFKAYSEGDKEF- 97
Query: 85 RIAVSAILPDSNKFVSPCGSCRQVIAEF 112
A A++ D+ + V PCG+CRQVI+E
Sbjct: 98 --AALAVIADTPRPVPPCGACRQVISEL 123
>gi|221195260|ref|ZP_03568316.1| cytidine deaminase [Atopobium rimae ATCC 49626]
gi|221185163|gb|EEE17554.1| cytidine deaminase [Atopobium rimae ATCC 49626]
Length = 172
Score = 99.4 bits (246), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 50/105 (47%), Positives = 69/105 (65%), Gaps = 4/105 (3%)
Query: 14 PIEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAIS 73
P Q L L+++AR+ AY PYS VGAALLC D +++ G N+ENA+Y T CAE+TA
Sbjct: 11 PEAQVLVELAVKAREKAYVPYSHFAVGAALLCADGSVYGGANLENAAYTPTNCAERTAFF 70
Query: 74 KAISEGQTKFKRIAVSAILPDS---NKFVSPCGSCRQVIAEFSSP 115
+A+ EGQ F IAV P+ +++ +PCG CRQVI E+ +P
Sbjct: 71 RAVFEGQRNFSAIAVVG-GPEGRPVSEWCTPCGVCRQVIREWCAP 114
>gi|146297317|ref|YP_001181088.1| cytidine deaminase [Caldicellulosiruptor saccharolyticus DSM 8903]
gi|145410893|gb|ABP67897.1| cytidine deaminase [Caldicellulosiruptor saccharolyticus DSM 8903]
Length = 135
Score = 99.4 bits (246), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 48/108 (44%), Positives = 70/108 (64%), Gaps = 3/108 (2%)
Query: 9 FSALDPIEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAE 68
+ +D +++ NL+ + + AY PYS +VGAA+L Q ++ GCN+ENASY +TICAE
Sbjct: 4 LTEIDNTLKSILNLAKEQQSRAYAPYSNFKVGAAVLTQSGKMYLGCNIENASYSLTICAE 63
Query: 69 KTAISKAISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPA 116
+ A+ KAISEG K I V + N+ +SPCG+CRQV+ E + A
Sbjct: 64 RVALFKAISEGHKDIKTIFV---IGPQNEPISPCGACRQVMLELAKDA 108
>gi|328946944|ref|YP_004364281.1| cytidine deaminase [Treponema succinifaciens DSM 2489]
gi|328447268|gb|AEB12984.1| cytidine deaminase [Treponema succinifaciens DSM 2489]
Length = 134
Score = 99.4 bits (246), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 52/124 (41%), Positives = 79/124 (63%), Gaps = 4/124 (3%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
+ L +I+ + +Y PYS VGAALL + I+TGCN+ENA+YG + CAE+TAI KA+
Sbjct: 7 EKLIKKAIEMLNFSYAPYSNFHVGAALLTSEGKIYTGCNIENAAYGPSNCAERTAIFKAV 66
Query: 77 SEGQTKFKRIA-VSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQVGLIT 135
SEG+ +F+ IA V F PCG CRQV+AEF D ++++ KS ++ ++T
Sbjct: 67 SEGKKEFEAIAIVGGKNGKIENFCPPCGVCRQVLAEFCKK--DFEIVLAKST-NEYKIMT 123
Query: 136 IDGM 139
++ +
Sbjct: 124 LEQL 127
>gi|331002152|ref|ZP_08325671.1| cytidine deaminase [Lachnospiraceae oral taxon 107 str. F0167]
gi|330411246|gb|EGG90662.1| cytidine deaminase [Lachnospiraceae oral taxon 107 str. F0167]
Length = 135
Score = 99.4 bits (246), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 50/107 (46%), Positives = 69/107 (64%), Gaps = 3/107 (2%)
Query: 25 QARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQTKFK 84
+AR AY PYSK +VGAAL+ + I GCN+ENA+Y CAE+TA KA+SEG F
Sbjct: 12 KARKMAYVPYSKFKVGAALMTKSGKIIHGCNIENAAYSPCNCAERTAFFKAVSEGIYDFC 71
Query: 85 RIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQV 131
+IAV + D++ +PCG CRQV+ EF +P ++ I+ SD +V
Sbjct: 72 KIAVVGGIKDADTLCTPCGVCRQVMQEFCNP---LEFEIIMSDGGKV 115
>gi|116754765|ref|YP_843883.1| cytidine deaminase [Methanosaeta thermophila PT]
gi|116666216|gb|ABK15243.1| cytidine deaminase [Methanosaeta thermophila PT]
Length = 388
Score = 99.4 bits (246), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 50/110 (45%), Positives = 73/110 (66%), Gaps = 7/110 (6%)
Query: 18 NLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAIS 77
+L +I ARD AY PYSK +VGAA+LC I+ G NVENAS G ICAE+ A++ A++
Sbjct: 261 DLIKSAIDARDQAYAPYSKFRVGAAVLCGSGKIYKGANVENASSGAGICAERVAMATAVA 320
Query: 78 EGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSD 127
G+ +F +AV+ L +K ++PCG CRQ++ EF D+ V++V S+
Sbjct: 321 AGEREFVALAVAGEL---SKPITPCGICRQMMIEFG----DMDVVMVGSN 363
>gi|402574348|ref|YP_006623691.1| cytidine deaminase [Desulfosporosinus meridiei DSM 13257]
gi|402255545|gb|AFQ45820.1| cytidine deaminase [Desulfosporosinus meridiei DSM 13257]
Length = 151
Score = 99.0 bits (245), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 55/122 (45%), Positives = 80/122 (65%), Gaps = 10/122 (8%)
Query: 6 IMEFSAL---DPIEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYG 62
+ EF L D I + L + + A +NAY PYS VG+A+L I++GCNVENASYG
Sbjct: 13 VNEFKGLLDSDSINE-LVSKAKAAYENAYVPYSHYPVGSAVLFSSGKIYSGCNVENASYG 71
Query: 63 MTICAEKTAISKAISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVL 122
+T+CAE+ AI +AI++G+ + K IA++ ++ F SPCG+CRQVI EF A D V+
Sbjct: 72 LTVCAERNAIFQAIAQGEREVKGIAIAV---PTDVFPSPCGACRQVIREF---AVDCPVI 125
Query: 123 IV 124
++
Sbjct: 126 LI 127
>gi|406979022|gb|EKE00881.1| hypothetical protein ACD_21C00259G0005 [uncultured bacterium]
Length = 136
Score = 99.0 bits (245), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 49/97 (50%), Positives = 65/97 (67%), Gaps = 2/97 (2%)
Query: 19 LANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISE 78
+A + +A NAY PYSK VGA + +D T+FTGCNVENA+YG T CAE+TAI I+
Sbjct: 8 MAQKACEAMKNAYAPYSKFHVGACVQAEDGTLFTGCNVENAAYGPTNCAERTAIFSMIAA 67
Query: 79 GQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSP 115
G+ + K IAV + + +PCG CRQVI EF++P
Sbjct: 68 GKKRIKAIAV--VGGSGDVLCTPCGVCRQVIREFAAP 102
>gi|114798713|ref|YP_760013.1| cytidine deaminase [Hyphomonas neptunium ATCC 15444]
gi|114738887|gb|ABI77012.1| cytidine deaminase [Hyphomonas neptunium ATCC 15444]
Length = 131
Score = 99.0 bits (245), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 51/95 (53%), Positives = 66/95 (69%), Gaps = 5/95 (5%)
Query: 20 ANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEG 79
A +QAR AY PYS+ +VGAALL D T+ TGCNVENAS+G T CAE+TA+ A++ G
Sbjct: 11 AAREMQAR--AYVPYSEYRVGAALLTADGTVVTGCNVENASFGATCCAERTAVFTAVAAG 68
Query: 80 QTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSS 114
F+ IAV+ D+ +PCG CRQV+AEFS+
Sbjct: 69 HRDFRAIAVATNGADAG---TPCGICRQVLAEFSA 100
>gi|374710513|ref|ZP_09714947.1| cytidine/deoxycytidine deaminase [Sporolactobacillus inulinus CASD]
Length = 130
Score = 99.0 bits (245), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 51/111 (45%), Positives = 73/111 (65%), Gaps = 5/111 (4%)
Query: 16 EQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKA 75
+Q L + QA AY PYS QVGAALL + +FTGCN+ENA+Y + CAE+TA+ KA
Sbjct: 3 DQKLIECARQAMKMAYVPYSHFQVGAALLTKSGKVFTGCNIENAAYSVCNCAERTALFKA 62
Query: 76 ISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKS 126
SEG+ ++ +AV A DS + V PCG+CRQV++E D++V++ +
Sbjct: 63 FSEGEHDYEALAVIA---DSRRPVPPCGACRQVLSELCPS--DMRVILANT 108
>gi|344996687|ref|YP_004799030.1| cytidine deaminase [Caldicellulosiruptor lactoaceticus 6A]
gi|343964906|gb|AEM74053.1| cytidine deaminase [Caldicellulosiruptor lactoaceticus 6A]
Length = 136
Score = 99.0 bits (245), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 54/123 (43%), Positives = 82/123 (66%), Gaps = 9/123 (7%)
Query: 12 LDPIEQNLA---NLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAE 68
LD I++ A NL+ +A+ AY PYS+ +VGAA + ++TGCN+ENASY +++CAE
Sbjct: 4 LDKIDEQTAYFLNLAKEAQKKAYAPYSRFRVGAAAVGSSSKVYTGCNIENASYPLSMCAE 63
Query: 69 KTAISKAISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDR 128
+ A+ KAISEG+++ K A+ I P+ N+ +SPCG+CRQVI E A D + + D
Sbjct: 64 RVALFKAISEGESEIK--ALYIIGPE-NEPISPCGACRQVIFEL---AKDSTIYLSNFDM 117
Query: 129 SQV 131
++V
Sbjct: 118 TKV 120
>gi|434398026|ref|YP_007132030.1| cytidine deaminase [Stanieria cyanosphaera PCC 7437]
gi|428269123|gb|AFZ35064.1| cytidine deaminase [Stanieria cyanosphaera PCC 7437]
Length = 149
Score = 99.0 bits (245), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 54/101 (53%), Positives = 69/101 (68%), Gaps = 6/101 (5%)
Query: 30 AYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI-SEGQTKFKRIAV 88
AY PYS+ +VGAA+L + IFTGCNVEN SYG+TICAE+ AI+ A+ SEG +FK A+
Sbjct: 38 AYAPYSQFRVGAAILTEQGNIFTGCNVENVSYGLTICAERNAIAGAVASEGGNEFKLKAI 97
Query: 89 SAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRS 129
AI+ D SPCG+CRQVI EF A V+I + + S
Sbjct: 98 -AIVNDRGIPCSPCGACRQVILEFGKDA----VVIFQGENS 133
>gi|238854659|ref|ZP_04644989.1| cytidine deaminase [Lactobacillus jensenii 269-3]
gi|260664398|ref|ZP_05865250.1| cytidine deaminase [Lactobacillus jensenii SJ-7A-US]
gi|313472198|ref|ZP_07812690.1| cytidine deaminase [Lactobacillus jensenii 1153]
gi|238832449|gb|EEQ24756.1| cytidine deaminase [Lactobacillus jensenii 269-3]
gi|239529578|gb|EEQ68579.1| cytidine deaminase [Lactobacillus jensenii 1153]
gi|260561463|gb|EEX27435.1| cytidine deaminase [Lactobacillus jensenii SJ-7A-US]
Length = 140
Score = 99.0 bits (245), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 54/127 (42%), Positives = 74/127 (58%), Gaps = 1/127 (0%)
Query: 16 EQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKA 75
E+ L +L+++ D AY PYSK V AALL + I TG N+ENA+YG TICAE+ AI
Sbjct: 5 EKKLYDLAVEHLDTAYAPYSKFHVSAALLTESGKITTGVNIENAAYGSTICAERVAIFNY 64
Query: 76 ISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQVGLIT 135
+++G T I I ++++ +SPCGSCRQV+AEF I + K D + L
Sbjct: 65 VNQGLTN-DPIKCLLITGNTSRPISPCGSCRQVMAEFMQADTKIVLTNAKGDYKEATLAD 123
Query: 136 IDGMYLT 142
I Y T
Sbjct: 124 ILPYYFT 130
>gi|296242289|ref|YP_003649776.1| cytidine deaminase [Thermosphaera aggregans DSM 11486]
gi|296094873|gb|ADG90824.1| cytidine deaminase [Thermosphaera aggregans DSM 11486]
Length = 128
Score = 99.0 bits (245), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 49/116 (42%), Positives = 78/116 (67%), Gaps = 4/116 (3%)
Query: 14 PIEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAIS 73
P +Q L + +++A N+Y PYS + V A++L + ++TG NVENASYG+TICAE++A+
Sbjct: 2 PDDQTLVSSAVKALRNSYAPYSNIHVAASVLGSNGKVYTGVNVENASYGLTICAERSAVV 61
Query: 74 KAISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRS 129
+ +S+G+ K +I AI+ D + PCG+CRQ IAEF +P +I + V S ++
Sbjct: 62 QMVSDGERKPVKI---AIVTDLKNPIPPCGACRQFIAEF-NPDVEIILYSVSSGKT 113
>gi|283795712|ref|ZP_06344865.1| cytidine deaminase [Clostridium sp. M62/1]
gi|291077391|gb|EFE14755.1| cytidine deaminase [Clostridium sp. M62/1]
Length = 156
Score = 99.0 bits (245), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 49/101 (48%), Positives = 64/101 (63%), Gaps = 1/101 (0%)
Query: 16 EQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKA 75
+Q L ++ A + AY PYS V AALLC D ++FTGCNVENASY ICAE++A S A
Sbjct: 19 KQGLIEAALGALERAYAPYSGFHVAAALLCGDGSVFTGCNVENASYPAGICAERSAFSAA 78
Query: 76 ISEGQTKFKRIA-VSAILPDSNKFVSPCGSCRQVIAEFSSP 115
+S G+ +F IA V + + +PCG CRQV+ EF P
Sbjct: 79 VSSGKREFTAIAIVGGRDGKTESYCAPCGICRQVMREFCRP 119
>gi|254167777|ref|ZP_04874627.1| cytidine deaminase [Aciduliprofundum boonei T469]
gi|289597066|ref|YP_003483762.1| cytidine deaminase [Aciduliprofundum boonei T469]
gi|197623305|gb|EDY35870.1| cytidine deaminase [Aciduliprofundum boonei T469]
gi|289534853|gb|ADD09200.1| cytidine deaminase [Aciduliprofundum boonei T469]
Length = 125
Score = 99.0 bits (245), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 53/103 (51%), Positives = 68/103 (66%), Gaps = 6/103 (5%)
Query: 19 LANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISE 78
L + +A DNAY PYS +VGAA+L IFTGCN+EN+SYG+TICAE+ AI KA+SE
Sbjct: 6 LIEYAKKAADNAYAPYSNFRVGAAVL-ACGRIFTGCNIENSSYGLTICAERVAIFKAVSE 64
Query: 79 GQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQV 121
G ++IAV A K PCG+C QV+AEF C+I +
Sbjct: 65 GCKNIEKIAVYA-----EKMPYPCGACLQVMAEFCDEECEITL 102
>gi|290992923|ref|XP_002679083.1| predicted protein [Naegleria gruberi]
gi|284092698|gb|EFC46339.1| predicted protein [Naegleria gruberi]
Length = 129
Score = 99.0 bits (245), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 54/110 (49%), Positives = 69/110 (62%), Gaps = 6/110 (5%)
Query: 23 SIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQTK 82
SI + AYCPYSK VGA +L D ++TGCNVEN SYG+TICAE+ A+ K +S
Sbjct: 5 SIDTQKIAYCPYSKFHVGACILGDDGQLYTGCNVENQSYGLTICAERCAVMKMVSNNCHC 64
Query: 83 FKRIAVSAILPDSNKFVSPCGSCRQVIAEF-SSPACDIQVLIVKSDRSQV 131
K I VS +N V+PCG+CRQV+ EF D VLIV S+ ++V
Sbjct: 65 IKGIVVS-----TNIGVTPCGACRQVLQEFVDDKTNDFPVLIVNSETNEV 109
>gi|421767169|ref|ZP_16203928.1| Cytidine deaminase [Lactococcus garvieae DCC43]
gi|407624310|gb|EKF51074.1| Cytidine deaminase [Lactococcus garvieae DCC43]
Length = 130
Score = 99.0 bits (245), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 46/99 (46%), Positives = 68/99 (68%), Gaps = 3/99 (3%)
Query: 14 PIEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAIS 73
P + L + +A +AY PYSK VGAAL+ D ++ GCN+ENAS+G++ CAE+TAI
Sbjct: 2 PATKELIEAAREASTHAYVPYSKFPVGAALVTTDGKVYKGCNIENASFGLSNCAERTAIF 61
Query: 74 KAISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEF 112
KA+SE Q +F + I +++ +SPCG+CRQV++EF
Sbjct: 62 KAVSEDQLQFSSL---YIYGETSAPISPCGACRQVVSEF 97
>gi|115373698|ref|ZP_01460992.1| cytidine deaminase [Stigmatella aurantiaca DW4/3-1]
gi|310823593|ref|YP_003955951.1| cytidine deaminase [Stigmatella aurantiaca DW4/3-1]
gi|115369245|gb|EAU68186.1| cytidine deaminase [Stigmatella aurantiaca DW4/3-1]
gi|309396665|gb|ADO74124.1| Cytidine deaminase [Stigmatella aurantiaca DW4/3-1]
Length = 134
Score = 99.0 bits (245), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 46/117 (39%), Positives = 74/117 (63%), Gaps = 3/117 (2%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
+ L + + R+ A+ PYS+ VGAA+L +D ++ TGCNVENA+YG+T+CAE+ A A+
Sbjct: 8 EALFQQAAKVRERAHVPYSRFPVGAAILFEDGSVVTGCNVENATYGLTVCAERGAFVSAV 67
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQVGL 133
++G + R AI+ D+ PCG CRQV+AEF+ P I+ ++ + ++ L
Sbjct: 68 AQGHS---RPVAVAIVVDTPTPCPPCGMCRQVMAEFAGPDLPIRSRTLQGEEARYAL 121
>gi|337755687|ref|YP_004648198.1| cytidine deaminase [Francisella sp. TX077308]
gi|336447292|gb|AEI36598.1| Cytidine deaminase [Francisella sp. TX077308]
Length = 133
Score = 99.0 bits (245), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 57/122 (46%), Positives = 76/122 (62%), Gaps = 6/122 (4%)
Query: 15 IEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISK 74
I L + +IQA +NAY PYSK VGAALL +D +I G NVENASYG+ CAE+T +
Sbjct: 5 INNKLIDAAIQAAENAYTPYSKFNVGAALLMKDGSILKGANVENASYGLCNCAERTVLFY 64
Query: 75 AISEGQTK--FKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVL-IVKSDRSQV 131
A ++G K K++AV A P+ VSPCG+CRQV++E C I + I K+D Q
Sbjct: 65 AYAQGYRKEDIKKLAVVADTPEG---VSPCGACRQVMSELLDLECPIILSNIKKTDIKQT 121
Query: 132 GL 133
+
Sbjct: 122 NI 123
>gi|295091385|emb|CBK77492.1| cytidine deaminase [Clostridium cf. saccharolyticum K10]
Length = 156
Score = 99.0 bits (245), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 49/101 (48%), Positives = 66/101 (65%), Gaps = 1/101 (0%)
Query: 16 EQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKA 75
+Q+L + ++ A + AY PYS V AALLC D ++FTGCNVENASY ICAE++A S A
Sbjct: 19 KQSLISSALGALERAYAPYSGFHVAAALLCGDGSVFTGCNVENASYPAGICAERSAFSAA 78
Query: 76 ISEGQTKFKRIA-VSAILPDSNKFVSPCGSCRQVIAEFSSP 115
+S G+ +F IA V + + +PCG CRQV+ EF P
Sbjct: 79 VSSGKREFTAIAIVGGRDGKTESYCAPCGICRQVMREFCRP 119
>gi|126733253|ref|ZP_01749000.1| Cytidine deaminase [Roseobacter sp. CCS2]
gi|126716119|gb|EBA12983.1| Cytidine deaminase [Roseobacter sp. CCS2]
Length = 149
Score = 99.0 bits (245), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 54/125 (43%), Positives = 74/125 (59%), Gaps = 8/125 (6%)
Query: 3 GHDIMEFSALDPIEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYG 62
GH++ E + + +L + R+NAY PYSK +VGAAL T++TGCNVEN +Y
Sbjct: 9 GHNLSERT---EAQMSLIESARAVRENAYAPYSKFKVGAALKTASGTVYTGCNVENVAYP 65
Query: 63 MTICAEKTAISKAISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVL 122
CAE AI+ ++ G T IAV + DS K VSPCG CRQ IAEF+ D++V
Sbjct: 66 EGTCAEAGAIAAMVAGGDTTIAEIAV---IADSPKPVSPCGGCRQKIAEFAQ--GDVKVT 120
Query: 123 IVKSD 127
+ +D
Sbjct: 121 LATTD 125
>gi|347752105|ref|YP_004859670.1| cytidine deaminase [Bacillus coagulans 36D1]
gi|347584623|gb|AEP00890.1| cytidine deaminase [Bacillus coagulans 36D1]
Length = 130
Score = 99.0 bits (245), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 49/108 (45%), Positives = 75/108 (69%), Gaps = 7/108 (6%)
Query: 23 SIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQTK 82
+I+ R AY PYS +VGA L+ + + GCN+ENASYG++ CAE+TAI KA+SEG+ +
Sbjct: 10 AIEIRKAAYVPYSHFEVGACLITKSGKEYLGCNIENASYGLSNCAERTAIFKAVSEGERE 69
Query: 83 FKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIV--KSDR 128
F+ + ++ D+++ + PCG+CRQV++EF D+ VL+V K DR
Sbjct: 70 FQYMVIAG---DTDEPIVPCGACRQVMSEFCEK--DMPVLLVNTKGDR 112
>gi|313224193|emb|CBY43613.1| unnamed protein product [Oikopleura dioica]
gi|313247754|emb|CBY15877.1| unnamed protein product [Oikopleura dioica]
Length = 119
Score = 99.0 bits (245), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 47/113 (41%), Positives = 73/113 (64%), Gaps = 7/113 (6%)
Query: 28 DNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQTKFKRIA 87
+NAY PYSK +VGA+LL D I TGCNVEN +YG T CAE+TA+ KA+SEG KF
Sbjct: 1 ENAYAPYSKFRVGASLLTTDGQIITGCNVENLAYGSTTCAERTAVCKAVSEGYRKFSACL 60
Query: 88 VSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQVGLITIDGMY 140
+++ L D ++ PCG+CR + EF D+ +++ K++ + ++ + ++
Sbjct: 61 ITSDLKD---WIFPCGNCRTTLEEFG----DLTLILSKNEGQETKIMKLSEIH 106
>gi|229816503|ref|ZP_04446802.1| hypothetical protein COLINT_03555 [Collinsella intestinalis DSM
13280]
gi|229807838|gb|EEP43641.1| hypothetical protein COLINT_03555 [Collinsella intestinalis DSM
13280]
Length = 143
Score = 99.0 bits (245), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 55/113 (48%), Positives = 71/113 (62%), Gaps = 6/113 (5%)
Query: 7 MEFSALDPIEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTIC 66
ME S ++ +E L +I AR+N+Y PYS VGAALLC D T++ GCN+ENA+Y C
Sbjct: 1 MERSIMNDLE--LVRAAIAARENSYSPYSNFAVGAALLCADGTVYGGCNIENAAYSPGNC 58
Query: 67 AEKTAISKAISEGQTKFKRIAV---SAILPDSNKFVSPCGSCRQVIAEFSSPA 116
AE+TA +AI +G F IAV A P S + +PCG CRQV+ EF PA
Sbjct: 59 AERTAFFRAIFDGHRDFTAIAVVGGPAGEPIS-ELCAPCGVCRQVMREFCDPA 110
>gi|404369530|ref|ZP_10974864.1| cytidine deaminase [Clostridium sp. 7_2_43FAA]
gi|404301772|gb|EEH99724.2| cytidine deaminase [Clostridium sp. 7_2_43FAA]
Length = 139
Score = 98.6 bits (244), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 48/99 (48%), Positives = 66/99 (66%), Gaps = 2/99 (2%)
Query: 19 LANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISE 78
L + +A+ AY PYS VGAALL + I+ GCN+ENA++ T CAE+TA KA+SE
Sbjct: 7 LVEKAYEAQKFAYTPYSNFHVGAALLGTNGKIYLGCNIENAAFTPTNCAERTAFFKAVSE 66
Query: 79 GQTKFKRIAVSAILPDSN--KFVSPCGSCRQVIAEFSSP 115
GQ +F+ IA+ + D+ ++ +PCG CRQVIAEF P
Sbjct: 67 GQHEFQAIAIVGNMADAEETEYCAPCGVCRQVIAEFCDP 105
>gi|261418493|ref|YP_003252175.1| cytidine deaminase [Geobacillus sp. Y412MC61]
gi|297529345|ref|YP_003670620.1| cytidine deaminase [Geobacillus sp. C56-T3]
gi|319767546|ref|YP_004133047.1| cytidine deaminase [Geobacillus sp. Y412MC52]
gi|261374950|gb|ACX77693.1| cytidine deaminase [Geobacillus sp. Y412MC61]
gi|297252597|gb|ADI26043.1| cytidine deaminase [Geobacillus sp. C56-T3]
gi|317112412|gb|ADU94904.1| cytidine deaminase [Geobacillus sp. Y412MC52]
Length = 132
Score = 98.6 bits (244), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 51/98 (52%), Positives = 70/98 (71%), Gaps = 4/98 (4%)
Query: 15 IEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISK 74
IEQ +A + +AR+ AY PYSK VGAALL + +++ GCN+ENA+Y + CAE+TA+ K
Sbjct: 3 IEQLIAE-AKKARELAYVPYSKFPVGAALLTKGGSVYRGCNIENAAYSVCNCAERTALFK 61
Query: 75 AISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEF 112
A SEG+ +F +AV A D+ + V PCG+CRQVIAE
Sbjct: 62 AYSEGEKEFTALAVIA---DTPRPVPPCGACRQVIAEL 96
>gi|325262896|ref|ZP_08129632.1| cytidine deaminase [Clostridium sp. D5]
gi|324031990|gb|EGB93269.1| cytidine deaminase [Clostridium sp. D5]
Length = 137
Score = 98.6 bits (244), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 53/113 (46%), Positives = 70/113 (61%), Gaps = 8/113 (7%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
+ L +I+A AY PYS +VGAALL +D I+ GCNVENA+Y + CAE+TA KA+
Sbjct: 5 KELIEQAIEAMGRAYAPYSGFRVGAALLTEDGRIYQGCNVENAAYSPSCCAERTAFFKAV 64
Query: 77 SEGQTKFKRIAV----SAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVK 125
SEG +F+ I + IL D SPCG CRQV+ EF PA Q+++ K
Sbjct: 65 SEGVKEFQAICIVGGKDGILTD---LTSPCGVCRQVMMEFCRPA-QFQIILAK 113
>gi|320530450|ref|ZP_08031508.1| cytidine deaminase [Selenomonas artemidis F0399]
gi|320137283|gb|EFW29207.1| cytidine deaminase [Selenomonas artemidis F0399]
Length = 136
Score = 98.6 bits (244), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 46/97 (47%), Positives = 66/97 (68%), Gaps = 3/97 (3%)
Query: 16 EQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKA 75
++ L + + R+NAY PYS+ VGAALL + ++ G NVENASY + ICAE+ AI++A
Sbjct: 3 DRELVAAATRFRENAYAPYSRFAVGAALLARSGRVYGGVNVENASYPVGICAERAAIARA 62
Query: 76 ISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEF 112
+++G+ F +AV A PD +PCG CRQV+AEF
Sbjct: 63 VTDGERAFDALAVVADTPD---VCAPCGMCRQVMAEF 96
>gi|218132191|ref|ZP_03460995.1| hypothetical protein BACPEC_00048 [[Bacteroides] pectinophilus ATCC
43243]
gi|217992912|gb|EEC58912.1| cytidine deaminase [[Bacteroides] pectinophilus ATCC 43243]
Length = 134
Score = 98.6 bits (244), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 52/112 (46%), Positives = 71/112 (63%), Gaps = 5/112 (4%)
Query: 16 EQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKA 75
E L + + A NAY PYSK VGAALL +D T++TGCN+ENASYG +ICAE+ AI+
Sbjct: 3 ETELLDEARHAMLNAYAPYSKFCVGAALLAEDGTVYTGCNIENASYGASICAERVAIAGC 62
Query: 76 ISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSD 127
IS+ + +RIA+ + S PCG CRQV++EF D Q+++ D
Sbjct: 63 ISDKKRHIRRIAICST---SGNETFPCGICRQVMSEFMDE--DSQIILETKD 109
>gi|427392560|ref|ZP_18886565.1| cytidine deaminase [Alloiococcus otitis ATCC 51267]
gi|425731240|gb|EKU94059.1| cytidine deaminase [Alloiococcus otitis ATCC 51267]
Length = 139
Score = 98.6 bits (244), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 49/99 (49%), Positives = 69/99 (69%), Gaps = 5/99 (5%)
Query: 28 DNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQTKFKRIA 87
D AY PYS VGAA+L ++ IF GCN+ENASYG++ CAE+TAI KAIS G +F +
Sbjct: 19 DQAYVPYSHFPVGAAILTREGKIFAGCNIENASYGLSNCAERTAIFKAISSGYRQFDYLV 78
Query: 88 VSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKS 126
V + +++ ++PCG+CRQV++EF D+ VL+V S
Sbjct: 79 V---IGQTDQPITPCGACRQVMSEFCQ--SDMPVLMVNS 112
>gi|448530743|ref|XP_003870135.1| Cdd1 protein [Candida orthopsilosis Co 90-125]
gi|380354489|emb|CCG24004.1| Cdd1 protein [Candida orthopsilosis]
Length = 148
Score = 98.6 bits (244), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 55/142 (38%), Positives = 83/142 (58%), Gaps = 8/142 (5%)
Query: 2 VGHDIMEFSALDPIEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASY 61
V +D +E S D L +L +A+ +YCPYSK +V + +L + TG NVENASY
Sbjct: 5 VYNDHLEVSDKD--FDKLRDLVTEAKSLSYCPYSKFRVASCVLTESGDFITGVNVENASY 62
Query: 62 GMTICAEKTAISKAISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQV 121
G ICAE+ AIS+A+S+G KF+ IA++A D+ K + PCG CRQ + EF+ DI +
Sbjct: 63 GAGICAERAAISRAVSQGHRKFRAIAIAA---DTPKPIVPCGICRQFMREFNE---DIVL 116
Query: 122 LIVKSDRSQVGLITIDGMYLTL 143
+ + + + D + L+
Sbjct: 117 FLFSKESDHIKVYLKDLLPLSF 138
>gi|336115271|ref|YP_004570038.1| cytidine deaminase [Bacillus coagulans 2-6]
gi|335368701|gb|AEH54652.1| cytidine deaminase [Bacillus coagulans 2-6]
Length = 130
Score = 98.6 bits (244), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 49/108 (45%), Positives = 75/108 (69%), Gaps = 7/108 (6%)
Query: 23 SIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQTK 82
+I+ R AY PYS +VGA L+ + + GCN+ENASYG++ CAE+TAI KA+SEG+ +
Sbjct: 10 AIEIRKAAYVPYSHFEVGACLVTKSGKEYLGCNIENASYGLSNCAERTAIFKAVSEGERE 69
Query: 83 FKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIV--KSDR 128
F+ + ++ D+++ + PCG+CRQV++EF D+ VL+V K DR
Sbjct: 70 FQYMVIAG---DTDEPIVPCGACRQVMSEFCGK--DMPVLLVNTKGDR 112
>gi|402309378|ref|ZP_10828373.1| cytidine deaminase [Eubacterium sp. AS15]
gi|400372873|gb|EJP25811.1| cytidine deaminase [Eubacterium sp. AS15]
Length = 139
Score = 98.6 bits (244), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 51/114 (44%), Positives = 70/114 (61%), Gaps = 5/114 (4%)
Query: 19 LANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISE 78
L + +AR +Y PYS QVGAALL ++ I+TGCN+E+A+Y T C E+TA KAISE
Sbjct: 6 LIKKAFEARKYSYSPYSHYQVGAALLAENGEIYTGCNIESATYSPTNCGERTAFFKAISE 65
Query: 79 GQTKFKRIAVSAILPDSN----KFVSPCGSCRQVIAEFSSPACDIQVLIVKSDR 128
G FK IA+ + + + PCG CRQV+AEF S D +++ KS+
Sbjct: 66 GVKDFKAIAIVGGMEGTKDGDFDYAPPCGVCRQVMAEFCSYD-DFNIILAKSEE 118
>gi|374997404|ref|YP_004972903.1| cytidine deaminase [Desulfosporosinus orientis DSM 765]
gi|357215770|gb|AET70388.1| cytidine deaminase, homotetrameric [Desulfosporosinus orientis DSM
765]
Length = 151
Score = 98.6 bits (244), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 55/133 (41%), Positives = 85/133 (63%), Gaps = 12/133 (9%)
Query: 8 EFSALDPIEQNLANLSIQAR---DNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMT 64
E LD ++++ L QA+ + AY PYS VGAA + I++GCNVENASYG+T
Sbjct: 15 EIEGLD--QKSILELIEQAKTVYEQAYAPYSHYPVGAAAVFSSGKIYSGCNVENASYGLT 72
Query: 65 ICAEKTAISKAISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIV 124
+CAE+ AI +A+++G+ + K +A++ + F SPCG+CRQVI EF A D V++V
Sbjct: 73 VCAERNAIFQAVAQGERELKGVAIAV---PGDGFPSPCGACRQVIREF---AADCPVILV 126
Query: 125 KSDRSQVGLITID 137
+ R +V L +++
Sbjct: 127 -NGRGEVRLTSLN 138
>gi|312898795|ref|ZP_07758183.1| cytidine deaminase [Megasphaera micronuciformis F0359]
gi|310619957|gb|EFQ03529.1| cytidine deaminase [Megasphaera micronuciformis F0359]
Length = 126
Score = 98.6 bits (244), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 50/120 (41%), Positives = 73/120 (60%), Gaps = 7/120 (5%)
Query: 12 LDPIEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTA 71
+ P ++ L + + QA++ AY PYS VGAA+ D ++TGCNVEN SYG+T CAE+ A
Sbjct: 1 MRPTDEALVSAARQAKEKAYAPYSHFSVGAAVDGDDGKVYTGCNVENGSYGLTSCAERNA 60
Query: 72 ISKAISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQV 131
+ A++ G K +AV A + PCG+CRQV+AEFS+ + +L K R +V
Sbjct: 61 VFAAVAAGCRKIHSVAVVA----DEDYTLPCGACRQVLAEFSA---ERIILTAKDGRYRV 113
>gi|167626392|ref|YP_001676892.1| cytidine deaminase [Francisella philomiragia subsp. philomiragia
ATCC 25017]
gi|167596393|gb|ABZ86391.1| cytidine deaminase [Francisella philomiragia subsp. philomiragia
ATCC 25017]
Length = 133
Score = 98.2 bits (243), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 53/107 (49%), Positives = 69/107 (64%), Gaps = 5/107 (4%)
Query: 15 IEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISK 74
I L + +IQA +NAY PYSK VGAALL +D +I G NVENASYG+ CAE+T +
Sbjct: 5 INNKLIDAAIQAAENAYTPYSKFNVGAALLMKDGSILKGANVENASYGLCNCAERTVLFY 64
Query: 75 AISEGQTK--FKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDI 119
A ++G K K++AV A P+ VSPCG+CRQV++E C I
Sbjct: 65 AYAQGYRKEDIKKLAVVADTPEG---VSPCGACRQVMSELLDLECPI 108
>gi|381210147|ref|ZP_09917218.1| cytidine:deoxycytidine deaminase [Lentibacillus sp. Grbi]
Length = 134
Score = 98.2 bits (243), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 48/105 (45%), Positives = 69/105 (65%), Gaps = 3/105 (2%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
Q L +I ++ AY PYSK VGAALL + I+TGCN+ENA+Y ++ CAE+ AI KA+
Sbjct: 4 QELLKEAIAIKNKAYVPYSKFPVGAALLSRSGKIYTGCNIENAAYPVSCCAERVAIFKAV 63
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQV 121
++G F + V+A D+ + V PCGSCRQV++EF + I +
Sbjct: 64 ADGVYDFSEMTVAA---DTERPVPPCGSCRQVMSEFFDSSMKIHL 105
>gi|406989395|gb|EKE09183.1| hypothetical protein ACD_16C00209G0030 [uncultured bacterium]
Length = 151
Score = 98.2 bits (243), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 53/108 (49%), Positives = 69/108 (63%), Gaps = 9/108 (8%)
Query: 12 LDPIEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTA 71
+ + L L+ A++ AY PYSK VGAAL+ QD + + GCNVEN SYG++ CAE+ A
Sbjct: 1 MKETQDKLIKLARSAQEKAYAPYSKFSVGAALVAQDGSFYMGCNVENISYGLSCCAERNA 60
Query: 72 ISKAISEG--QTKFKRIAVS--AILPDSNKFVSPCGSCRQVIAEFSSP 115
I K +SE K K IAVS A +P +PCG+CRQVI EFS+P
Sbjct: 61 IFKMVSEKGPHQKIKAIAVSTKADIP-----CTPCGACRQVIQEFSTP 103
>gi|85720001|gb|ABC75569.1| cytidine deaminase [Ictalurus punctatus]
Length = 114
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 48/78 (61%), Positives = 59/78 (75%), Gaps = 2/78 (2%)
Query: 35 SKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQTKFKRIAVSAILPD 94
SK +VGAALL QD T+FTGCNVEN + ICAE+ AISKA+S G KFK IA+S+ + D
Sbjct: 1 SKFRVGAALLTQDGTVFTGCNVENVCLTLGICAEQVAISKAVSAGHRKFKAIAISSDMVD 60
Query: 95 SNKFVSPCGSCRQVIAEF 112
+ F+SPCG CRQV+ EF
Sbjct: 61 N--FISPCGGCRQVMREF 76
>gi|328773746|gb|EGF83783.1| hypothetical protein BATDEDRAFT_21251 [Batrachochytrium
dendrobatidis JAM81]
Length = 163
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/109 (47%), Positives = 64/109 (58%), Gaps = 14/109 (12%)
Query: 15 IEQNLANLSIQARDNAYCPYSKLQVGAALLCQDD-----------TIFTGCNVENASYGM 63
++ LA + QA++ +Y PYSK +VGAALL GCNVENASYG
Sbjct: 22 VQLQLAQFATQAKEMSYSPYSKFRVGAALLAPTGEQVIELYLPLFQYIVGCNVENASYGG 81
Query: 64 TICAEKTAISKAISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEF 112
TICAE+TA KA+SEG KF IAV + D +SPCG CRQ + EF
Sbjct: 82 TICAERTAFVKAVSEGHKKFLAIAV---ITDKEAAISPCGFCRQFMVEF 127
>gi|306821729|ref|ZP_07455325.1| cytidine deaminase [Eubacterium yurii subsp. margaretiae ATCC
43715]
gi|304550198|gb|EFM38193.1| cytidine deaminase [Eubacterium yurii subsp. margaretiae ATCC
43715]
Length = 139
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/113 (44%), Positives = 70/113 (61%), Gaps = 5/113 (4%)
Query: 19 LANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISE 78
L + +AR +Y PYS QVGAALL ++ I+TGCN+E+A+Y T C E+TA KAISE
Sbjct: 6 LIKKAFEARKYSYSPYSHYQVGAALLAENGEIYTGCNIESATYSPTNCGERTAFFKAISE 65
Query: 79 GQTKFKRIAVSAILPDSN----KFVSPCGSCRQVIAEFSSPACDIQVLIVKSD 127
G F+ IA+ + D+ + PCG CRQV+ EF S D +++ KS+
Sbjct: 66 GVKDFRAIAIVGGMEDTKDGEFDYAPPCGVCRQVMVEFCSYD-DFDIILAKSE 117
>gi|195386504|ref|XP_002051944.1| GJ24356 [Drosophila virilis]
gi|194148401|gb|EDW64099.1| GJ24356 [Drosophila virilis]
Length = 167
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 54/126 (42%), Positives = 76/126 (60%), Gaps = 4/126 (3%)
Query: 2 VGHDIMEFSALDPIEQNLANLSIQARDNAYCPYSKLQVGAALLCQ-DDTIFTGCNVENAS 60
+ ++ + LD Q L + R AY PYS +VG+A + ++ IFTGCNVENA+
Sbjct: 13 ITESVIPYGKLDATVQELLCAAYVVRQCAYAPYSNFKVGSAFRAKINNQIFTGCNVENAA 72
Query: 61 YGMTICAEKTAISKAISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQ 120
+ T CAE+TA++KAISEG +F AV A P+ F+SPCG CRQ I EF+ DI
Sbjct: 73 FTPTACAERTALTKAISEGYQQFSTGAVVAYKPEV--FISPCGVCRQFIREFAG-NTDIP 129
Query: 121 VLIVKS 126
+ I ++
Sbjct: 130 IYIAQA 135
>gi|399517891|ref|ZP_10759426.1| Cytidine deaminase [Leuconostoc pseudomesenteroides 4882]
gi|398647202|emb|CCJ67453.1| Cytidine deaminase [Leuconostoc pseudomesenteroides 4882]
Length = 130
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 44/117 (37%), Positives = 74/117 (63%), Gaps = 5/117 (4%)
Query: 15 IEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISK 74
+ QNLA+++ A ++ Y PYS VGAALL ++ +F G N+EN S+G+T CAE+TAI
Sbjct: 3 VPQNLADVANAALNDTYTPYSHFPVGAALLAENGEVFKGVNIENVSFGLTNCAERTAIFT 62
Query: 75 AISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQV 131
A++ G F + +S +++ ++PCG+CRQV+ EF P D+ + ++ ++
Sbjct: 63 AVAAGHRHFHGLVISG---KTDEPIAPCGACRQVMVEFFEP--DMPIWLINDQGQEI 114
>gi|385799571|ref|YP_005835975.1| cytidine deaminase [Halanaerobium praevalens DSM 2228]
gi|309388935|gb|ADO76815.1| cytidine deaminase [Halanaerobium praevalens DSM 2228]
Length = 139
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/112 (41%), Positives = 77/112 (68%), Gaps = 5/112 (4%)
Query: 13 DPIEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAI 72
+ I+ + ++ + NAY PYS +GAA+L D +I+TG N+ENAS+G+T CAE++AI
Sbjct: 3 EEIKNKMFKKALAVQKNAYVPYSDFPLGAAVLTADGSIYTGVNIENASFGLTNCAERSAI 62
Query: 73 SKAISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIV 124
A+S+G+ ++I I+ + + V+PCG+CRQVI EF+ A DI+V+++
Sbjct: 63 FSAVSQGK---RKIEALLIVSSTEEPVTPCGACRQVIKEFA--AGDIEVIMM 109
>gi|195035191|ref|XP_001989061.1| GH11513 [Drosophila grimshawi]
gi|193905061|gb|EDW03928.1| GH11513 [Drosophila grimshawi]
Length = 159
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/121 (43%), Positives = 76/121 (62%), Gaps = 2/121 (1%)
Query: 5 DIMEFSALDPIEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMT 64
++ + +LD Q L + +AR+NAYCPYS VGAA+ D TI+TGCN+EN +Y +
Sbjct: 14 NVRDHDSLDVSVQELIRAAAEARNNAYCPYSNFAVGAAIRTSDGTIYTGCNIENGAYAAS 73
Query: 65 ICAEKTAISKAISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIV 124
ICAE+TA KA+SEG+ +F IA + + F +PCG CRQ ++EF+ DI +
Sbjct: 74 ICAERTAAVKALSEGKREF--IACAVVAQQEKGFTTPCGVCRQFLSEFAINGKDIPLYAA 131
Query: 125 K 125
K
Sbjct: 132 K 132
>gi|315640183|ref|ZP_07895303.1| cytidine deaminase [Enterococcus italicus DSM 15952]
gi|315484065|gb|EFU74541.1| cytidine deaminase [Enterococcus italicus DSM 15952]
Length = 134
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/107 (43%), Positives = 69/107 (64%), Gaps = 3/107 (2%)
Query: 16 EQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKA 75
+Q + ++ A D AY PYS VGA L+ + ++ G N+ENASYG+T CAE+TAI KA
Sbjct: 5 KQEWIDNAVMALDKAYVPYSHFPVGACLVTKAGKVYQGLNIENASYGLTNCAERTAIFKA 64
Query: 76 ISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVL 122
+SEG+ F + ++ P K +SPCG+CRQVI+EF A + ++
Sbjct: 65 VSEGERDFAHLVIAGRTP---KPISPCGACRQVISEFCDAAMPVTLV 108
>gi|320583217|gb|EFW97432.1| cytidine aminohydrolase, putative cytidine deaminase, putative
[Ogataea parapolymorpha DL-1]
Length = 136
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/121 (42%), Positives = 74/121 (61%), Gaps = 6/121 (4%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
Q L ++ R AYCPYS VG LL + F G NVENASYG ICAE+TA A+
Sbjct: 8 QTLKERALANRAKAYCPYSNFHVGCCLLANGE-FFDGANVENASYGGAICAERTAAVAAV 66
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQVGLITI 136
++G+T+F+ +A+S D + +SPCG CRQ + EFS A D+ + + D S+V +T+
Sbjct: 67 TQGRTRFEAVAISG---DLDTCISPCGICRQFLREFS--ALDVPIYMYNKDGSKVEKLTM 121
Query: 137 D 137
+
Sbjct: 122 N 122
>gi|258516220|ref|YP_003192442.1| cytidine deaminase [Desulfotomaculum acetoxidans DSM 771]
gi|257779925|gb|ACV63819.1| cytidine deaminase [Desulfotomaculum acetoxidans DSM 771]
Length = 130
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/108 (51%), Positives = 71/108 (65%), Gaps = 6/108 (5%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
Q L + + R+NAY PYS VGAALL D I+TGCNVEN SYG+TICAE+ AI+ A+
Sbjct: 7 QELIAAARKVRENAYAPYSGFGVGAALLAGDGQIYTGCNVENISYGLTICAERAAIANAV 66
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIV 124
+ GQ FK IA+ A D SPCG+CRQV+ EF D++V +V
Sbjct: 67 AAGQRVFKAIAIIAGTEDC---CSPCGACRQVLVEFGP---DMEVYLV 108
>gi|56421024|ref|YP_148342.1| cytidine deaminase [Geobacillus kaustophilus HTA426]
gi|56380866|dbj|BAD76774.1| cytidine deaminase [Geobacillus kaustophilus HTA426]
Length = 140
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/103 (50%), Positives = 71/103 (68%), Gaps = 4/103 (3%)
Query: 10 SALDPIEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEK 69
S L IEQ + + +AR+ AY PYSK VGAALL + +++ GCN+ENA+Y + CAE+
Sbjct: 6 SQLVEIEQLIVE-AKKARELAYVPYSKFPVGAALLTKGGSVYRGCNIENAAYSVCNCAER 64
Query: 70 TAISKAISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEF 112
TA+ KA SEG+ +F +AV A D+ + V PCG+CRQVIAE
Sbjct: 65 TALFKAYSEGEKEFTALAVIA---DTPRPVPPCGACRQVIAEL 104
>gi|332799929|ref|YP_004461428.1| cytidine deaminase [Tepidanaerobacter acetatoxydans Re1]
gi|438003204|ref|YP_007272947.1| Cytidine deaminase [Tepidanaerobacter acetatoxydans Re1]
gi|332697664|gb|AEE92121.1| cytidine deaminase [Tepidanaerobacter acetatoxydans Re1]
gi|432179998|emb|CCP26971.1| Cytidine deaminase [Tepidanaerobacter acetatoxydans Re1]
Length = 130
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/124 (42%), Positives = 76/124 (61%), Gaps = 6/124 (4%)
Query: 16 EQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKA 75
E+ L ++ A NAY PYSK VGA + D GCN+ENASYG+TICAE+ A+ KA
Sbjct: 6 EKELVRKALSAMKNAYVPYSKFPVGACAVTADGEEVLGCNIENASYGLTICAERVALFKA 65
Query: 76 ISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQVGLIT 135
SEG+ +AV+A + ++ VSPCG+CRQVI+E + A V + D S++ +T
Sbjct: 66 YSEGKKDIVALAVAA---NVDEPVSPCGACRQVISELAPKAI---VYLTNKDGSKIKRMT 119
Query: 136 IDGM 139
+ +
Sbjct: 120 AEEL 123
>gi|238916904|ref|YP_002930421.1| cytidine deaminase [Eubacterium eligens ATCC 27750]
gi|238872264|gb|ACR71974.1| cytidine deaminase [Eubacterium eligens ATCC 27750]
Length = 126
Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/99 (49%), Positives = 68/99 (68%), Gaps = 5/99 (5%)
Query: 25 QARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQTKFK 84
+A +N+Y PYS VGAALL D +F GCN+EN+S+G T CAE+TAI KA+SEG FK
Sbjct: 12 EALENSYSPYSHFAVGAALLSTDGQVFIGCNIENSSFGATNCAERTAIFKAVSEGVKDFK 71
Query: 85 RIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLI 123
I AI+ ++ PCG CRQV++EF +P D ++++
Sbjct: 72 AI---AIVCSGDQPAYPCGICRQVMSEFFNP--DTRIIV 105
>gi|410584324|ref|ZP_11321427.1| pyrimidine-nucleoside phosphorylase [Thermaerobacter subterraneus
DSM 13965]
gi|410504259|gb|EKP93770.1| pyrimidine-nucleoside phosphorylase [Thermaerobacter subterraneus
DSM 13965]
Length = 628
Score = 97.8 bits (242), Expect = 1e-18, Method: Composition-based stats.
Identities = 45/95 (47%), Positives = 67/95 (70%), Gaps = 3/95 (3%)
Query: 19 LANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISE 78
L L+ AR +A P+S+ +VGAAL D IFTG N+ENAS+G+T+CAE+ A+ KA+SE
Sbjct: 509 LVQLARAARHSAIAPFSRYRVGAALEAADGRIFTGANIENASFGLTMCAERVALFKALSE 568
Query: 79 GQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFS 113
G +F+RI ++A P+ PCG+CRQ++ E++
Sbjct: 569 GVRQFRRIVITADGPEP---AFPCGACRQLLFEYA 600
>gi|312110183|ref|YP_003988499.1| cytidine deaminase [Geobacillus sp. Y4.1MC1]
gi|336234647|ref|YP_004587263.1| cytidine deaminase [Geobacillus thermoglucosidasius C56-YS93]
gi|423719217|ref|ZP_17693399.1| cytidine deaminase [Geobacillus thermoglucosidans TNO-09.020]
gi|311215284|gb|ADP73888.1| cytidine deaminase [Geobacillus sp. Y4.1MC1]
gi|335361502|gb|AEH47182.1| cytidine deaminase [Geobacillus thermoglucosidasius C56-YS93]
gi|383368120|gb|EID45395.1| cytidine deaminase [Geobacillus thermoglucosidans TNO-09.020]
Length = 132
Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/88 (53%), Positives = 63/88 (71%), Gaps = 3/88 (3%)
Query: 25 QARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQTKFK 84
+AR+ AY PYS+ +VGAALL +D ++ GCN+ENA+Y M CAE+TA+ KA SEG +F
Sbjct: 12 KAREYAYAPYSQFKVGAALLTKDGKVYRGCNIENAAYSMCNCAERTALFKAYSEGDKEFA 71
Query: 85 RIAVSAILPDSNKFVSPCGSCRQVIAEF 112
+AV A D+ + V PCG+CRQVI E
Sbjct: 72 ALAVIA---DTPRPVPPCGACRQVIFEL 96
>gi|392564868|gb|EIW58046.1| cytidine deaminase [Trametes versicolor FP-101664 SS1]
Length = 157
Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/110 (48%), Positives = 69/110 (62%), Gaps = 5/110 (4%)
Query: 18 NLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAIS 77
L + +A++ AYC YS +VGAALL I G N+ENASYG TICAE+TA KA+S
Sbjct: 15 RLVKAAFEAKEFAYCRYSNFRVGAALLTTTGEIIKGANIENASYGGTICAERTAFVKAVS 74
Query: 78 EGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSD 127
EG F +AV + D +SPCG CRQVI EF A ++ +L+V +D
Sbjct: 75 EGVRSFTALAV---VTDVASAISPCGMCRQVIREFC--AENMPILLVPAD 119
>gi|325290527|ref|YP_004266708.1| cytidine deaminase [Syntrophobotulus glycolicus DSM 8271]
gi|324965928|gb|ADY56707.1| cytidine deaminase [Syntrophobotulus glycolicus DSM 8271]
Length = 137
Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/102 (50%), Positives = 67/102 (65%), Gaps = 6/102 (5%)
Query: 15 IEQNLANLSIQARD---NAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTA 71
+E NL +A+ N+Y PYS+ VGAA+L + I TGCNVEN+SYG+T+CAE+ A
Sbjct: 1 MEDRYLNLLAEAKAAGANSYSPYSRYPVGAAILWETGRITTGCNVENSSYGLTVCAERNA 60
Query: 72 ISKAISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFS 113
I K I EG+ K +AVS +K SPCG+CRQVI EF+
Sbjct: 61 IYKGICEGERKISALAVSV---QDSKMPSPCGACRQVIREFA 99
>gi|255658581|ref|ZP_05403990.1| cytidine deaminase [Mitsuokella multacida DSM 20544]
gi|260849388|gb|EEX69395.1| cytidine deaminase [Mitsuokella multacida DSM 20544]
Length = 128
Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/100 (49%), Positives = 64/100 (64%), Gaps = 3/100 (3%)
Query: 16 EQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKA 75
+Q L ++ R+ AY YS +VGAA+L +D +F GCN+ENASY ++ CAE+TAI KA
Sbjct: 3 DQELIEVAKAYRERAYAAYSNFKVGAAVLTKDGKVFGGCNIENASYPVSNCAERTAIFKA 62
Query: 76 ISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSP 115
+SEG F IA+ A P SPCG CRQ I+EF P
Sbjct: 63 VSEGHRDFAAIAIIADTPGP---CSPCGMCRQAISEFKIP 99
>gi|448238768|ref|YP_007402826.1| cytidine deaminase [Geobacillus sp. GHH01]
gi|445207610|gb|AGE23075.1| cytidine deaminase [Geobacillus sp. GHH01]
Length = 132
Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/98 (51%), Positives = 70/98 (71%), Gaps = 4/98 (4%)
Query: 15 IEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISK 74
+EQ +A + +AR+ AY PYSK VGAALL + +++ GCN+ENA+Y + CAE+TA+ K
Sbjct: 3 MEQLIAE-AKKARELAYVPYSKFPVGAALLTKGGSVYRGCNIENAAYSVCNCAERTALFK 61
Query: 75 AISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEF 112
A SEG+ +F +AV A D+ + V PCG+CRQVIAE
Sbjct: 62 AYSEGEKEFTALAVIA---DTPRPVPPCGACRQVIAEL 96
>gi|399574420|ref|ZP_10768179.1| cytidine deaminase [Halogranum salarium B-1]
gi|399240252|gb|EJN61177.1| cytidine deaminase [Halogranum salarium B-1]
Length = 139
Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/107 (46%), Positives = 72/107 (67%), Gaps = 10/107 (9%)
Query: 21 NLSIQARD---NAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAIS 77
+L QARD +AY PYS+ +VGAAL D T+F GCN+ENA+Y ++ AE+ AI++A+
Sbjct: 4 DLIQQARDVLEHAYVPYSEYRVGAALRATDGTVFVGCNIENANYSNSLHAEEVAIAEAVK 63
Query: 78 EGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIV 124
+G T+F R+AV++ D V+PCG CRQ +AEF CD + +V
Sbjct: 64 QGYTEFDRLAVTSAARDG---VTPCGMCRQTLAEF----CDEDLTVV 103
>gi|288574132|ref|ZP_06392489.1| cytidine deaminase [Dethiosulfovibrio peptidovorans DSM 11002]
gi|288569873|gb|EFC91430.1| cytidine deaminase [Dethiosulfovibrio peptidovorans DSM 11002]
Length = 134
Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/126 (41%), Positives = 75/126 (59%), Gaps = 3/126 (2%)
Query: 18 NLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAIS 77
LA + +A ++ PYS VGAA+L D I +GCNVEN+S+G+T CAE+TA+ A+
Sbjct: 10 RLAKAASEASTRSWSPYSGFPVGAAILMTDGEIMSGCNVENSSFGLTNCAERTAVFSAVV 69
Query: 78 EGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSD--RSQVGLIT 135
G K +A++ P +K SPCG+CRQV+AEF P+ +++ SD R V +
Sbjct: 70 SGYRKGDFVALAVFTP-GDKANSPCGACRQVLAEFFDPSSEVRAFCDGSDELRWTVEGLL 128
Query: 136 IDGMYL 141
DG L
Sbjct: 129 PDGFSL 134
>gi|210614363|ref|ZP_03290182.1| hypothetical protein CLONEX_02396 [Clostridium nexile DSM 1787]
gi|210150707|gb|EEA81716.1| hypothetical protein CLONEX_02396 [Clostridium nexile DSM 1787]
Length = 139
Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 54/126 (42%), Positives = 76/126 (60%), Gaps = 9/126 (7%)
Query: 15 IEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISK 74
I + + L+I+ D +Y PYS +VGAAL +D +TGCN+ENASY T CAE+TA K
Sbjct: 5 IAEEMIELAIKQLDFSYVPYSGFKVGAALRTKDGQYYTGCNIENASYTPTNCAERTAFFK 64
Query: 75 AISEGQTKFKRIAV----SAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQ 130
A+SEG +F+ I V IL D + SPCG CRQV+ EF P + +I+ + + Q
Sbjct: 65 AVSEGVREFEAICVVGGKDGILTD---YASPCGVCRQVMMEFCDP--ETFQIILATGKEQ 119
Query: 131 VGLITI 136
+ T+
Sbjct: 120 YEVFTL 125
>gi|304403960|ref|ZP_07385622.1| cytidine deaminase [Paenibacillus curdlanolyticus YK9]
gi|304346938|gb|EFM12770.1| cytidine deaminase [Paenibacillus curdlanolyticus YK9]
Length = 147
Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/114 (45%), Positives = 71/114 (62%), Gaps = 5/114 (4%)
Query: 8 EFSALDPIEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICA 67
E + P + L N + +AR+ AY PYS QVGAALL + I GCNVENA+YG T CA
Sbjct: 5 EEQLIKPEWRQLMNAAREARERAYVPYSHFQVGAALLDANGHIHYGCNVENAAYGPTNCA 64
Query: 68 EKTAISKAISE--GQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDI 119
E+TA+ +AI++ G F+ IAV + D+ ++PCG CRQV+ E PA +
Sbjct: 65 ERTALFRAIADGCGPQSFRAIAV---IGDTAAPITPCGVCRQVLIELGGPALPV 115
>gi|407718756|ref|YP_006796161.1| cytidine deaminase [Leuconostoc carnosum JB16]
gi|407242512|gb|AFT82162.1| cytidine deaminase [Leuconostoc carnosum JB16]
Length = 133
Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 46/116 (39%), Positives = 73/116 (62%), Gaps = 8/116 (6%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
+ L +++I+A D Y PYS VGAALL I+ G N+EN S+G+T CAE+TAI A+
Sbjct: 8 KKLVDVAIEALDQTYTPYSHFPVGAALLTASGDIYKGINIENVSFGLTNCAERTAIFSAV 67
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVL-----IVKSD 127
+ G +F+ + +S +N+ ++PCG+CRQV+ EF P I ++ ++K+D
Sbjct: 68 AAGHREFEGLVISG---RTNEPIAPCGACRQVMVEFFEPHMPIWLINDTGKMIKTD 120
>gi|375009576|ref|YP_004983209.1| cytidine deaminase [Geobacillus thermoleovorans CCB_US3_UF5]
gi|359288425|gb|AEV20109.1| Cytidine deaminase [Geobacillus thermoleovorans CCB_US3_UF5]
Length = 157
Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/103 (50%), Positives = 71/103 (68%), Gaps = 4/103 (3%)
Query: 10 SALDPIEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEK 69
S L IEQ + + +AR+ AY PYSK VGAALL + +++ GCN+ENA+Y + CAE+
Sbjct: 23 SQLVEIEQLIVE-AKKARELAYVPYSKFPVGAALLTKGGSVYRGCNIENAAYSVCNCAER 81
Query: 70 TAISKAISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEF 112
TA+ KA SEG+ +F +AV A D+ + V PCG+CRQVIAE
Sbjct: 82 TALFKAYSEGEKEFTALAVIA---DTPRPVPPCGACRQVIAEL 121
>gi|335040061|ref|ZP_08533199.1| cytidine deaminase [Caldalkalibacillus thermarum TA2.A1]
gi|334180025|gb|EGL82652.1| cytidine deaminase [Caldalkalibacillus thermarum TA2.A1]
Length = 137
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/99 (46%), Positives = 68/99 (68%), Gaps = 1/99 (1%)
Query: 31 YCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQTKFKRIAVS- 89
Y PYS VGAALL + GCN+ENASYG+T CAE+TA+ KA+SE + + R ++
Sbjct: 18 YAPYSGFPVGAALLTASGKVVWGCNIENASYGLTNCAERTAVFKAVSEAEKEADRTFLAI 77
Query: 90 AILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDR 128
A++ D+++ V+PCG+CRQV+AEF P + + VK ++
Sbjct: 78 AVIADTDRPVAPCGACRQVLAEFCKPDMPVYLANVKGEQ 116
>gi|283777810|ref|YP_003368565.1| cytidine deaminase [Pirellula staleyi DSM 6068]
gi|283436263|gb|ADB14705.1| cytidine deaminase [Pirellula staleyi DSM 6068]
Length = 130
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 50/115 (43%), Positives = 69/115 (60%), Gaps = 8/115 (6%)
Query: 13 DPIEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAI 72
D L +++ + AY YS VGAALL + I GCNVENASYG+TICAE++A+
Sbjct: 3 DETRSQLVTAALEVQQKAYAKYSNFWVGAALLTESGKIIAGCNVENASYGLTICAERSAV 62
Query: 73 SKAISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSD 127
A+ G+T FK IA++ + PCG+CRQV+AEF + V++V SD
Sbjct: 63 FAAVGMGETSFKAIAIA-----TAGGYPPCGACRQVLAEFCG---SLPVILVNSD 109
>gi|238507535|ref|XP_002384969.1| cytidine deaminase, putative [Aspergillus flavus NRRL3357]
gi|220689682|gb|EED46033.1| cytidine deaminase, putative [Aspergillus flavus NRRL3357]
Length = 203
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/103 (47%), Positives = 63/103 (61%), Gaps = 3/103 (2%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
Q LA+ +I A+ AYCPYSK +VGA +L Q G NVENASY + CAE+ A A+
Sbjct: 69 QTLASKAIAAKATAYCPYSKFRVGACILTQSGEYIVGANVENASYPVGTCAERVAFGTAV 128
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDI 119
G FK +AV+ DSN SPCG CRQ + EF++P+ I
Sbjct: 129 VAGYHDFKAVAVAT---DSNPPASPCGMCRQFMNEFTTPSFPI 168
>gi|366085897|ref|ZP_09452382.1| cytidine deaminase [Lactobacillus zeae KCTC 3804]
Length = 129
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/112 (46%), Positives = 70/112 (62%), Gaps = 4/112 (3%)
Query: 19 LANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISE 78
L ++ AR+NAY PYS VGAA+ D IF+G N+ENASYG++ CAE++AI A+S
Sbjct: 4 LRTAALAARENAYVPYSHFAVGAAVRV-GDRIFSGANIENASYGLSNCAERSAIFAAVSA 62
Query: 79 GQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQ 130
G TK + V + D+ VSPCG+CRQVI+EF I + V+ D Q
Sbjct: 63 GYTKLDELLV---IADTEGPVSPCGACRQVISEFFPADAVITLANVRGDSQQ 111
>gi|354544492|emb|CCE41216.1| hypothetical protein CPAR2_302050 [Candida parapsilosis]
Length = 148
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/142 (38%), Positives = 84/142 (59%), Gaps = 8/142 (5%)
Query: 2 VGHDIMEFSALDPIEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASY 61
+ HD E S LD + L ++ + + AYCPYSK +V + +L + TG NVENASY
Sbjct: 5 IYHDHSEIS-LDEFNK-LKDMVTETKSLAYCPYSKFRVASCVLTESGDFITGVNVENASY 62
Query: 62 GMTICAEKTAISKAISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQV 121
G ICAE++AIS+A+S+G KF+ IA++A P+ + PCG CRQ + EF+ +I +
Sbjct: 63 GAGICAERSAISRAVSQGYRKFRVIAIAADTPEP---IVPCGICRQFMREFNE---NIAL 116
Query: 122 LIVKSDRSQVGLITIDGMYLTL 143
+ +D + + D + L+
Sbjct: 117 FLFNNDSDFIKVYLKDLLPLSF 138
>gi|254877355|ref|ZP_05250065.1| cytidine deaminase [Francisella philomiragia subsp. philomiragia
ATCC 25015]
gi|254843376|gb|EET21790.1| cytidine deaminase [Francisella philomiragia subsp. philomiragia
ATCC 25015]
Length = 133
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/107 (49%), Positives = 68/107 (63%), Gaps = 5/107 (4%)
Query: 15 IEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISK 74
I L + +IQA NAY PYSK VGAALL +D +I G NVENASYG+ CAE+T +
Sbjct: 5 INNKLIDAAIQAAGNAYTPYSKFNVGAALLMKDGSILKGANVENASYGLCNCAERTVLFY 64
Query: 75 AISEGQTK--FKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDI 119
A ++G K K++AV A P+ VSPCG+CRQV++E C I
Sbjct: 65 AYAQGYRKEDIKKLAVVADTPEG---VSPCGACRQVMSELLDLECPI 108
>gi|195433735|ref|XP_002064863.1| GK15160 [Drosophila willistoni]
gi|194160948|gb|EDW75849.1| GK15160 [Drosophila willistoni]
Length = 216
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/136 (38%), Positives = 74/136 (54%), Gaps = 4/136 (2%)
Query: 1 MVGHDIMEFSALDPIEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENAS 60
M+ I + LD + L + ++ R NAY PYSK +VGAA + + GCN+ENA+
Sbjct: 59 MLDEYITTYCELDDTGRELLDAALDVRHNAYAPYSKFKVGAAFRSKSGVAYAGCNIENAA 118
Query: 61 YGMTICAEKTAISKAISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQ 120
+ CAE+ A++K ISEG K+ AV A P F +PCG CRQ I EF+ DI
Sbjct: 119 FTPGCCAERAALAKGISEGVLKYTAGAVVACHPSG--FTTPCGVCRQFILEFAK--ADIP 174
Query: 121 VLIVKSDRSQVGLITI 136
+ I K+ + + I
Sbjct: 175 LYIAKAPEDEAAIPAI 190
>gi|448591308|ref|ZP_21650909.1| cytidine deaminase [Haloferax elongans ATCC BAA-1513]
gi|445733567|gb|ELZ85134.1| cytidine deaminase [Haloferax elongans ATCC BAA-1513]
Length = 140
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/103 (45%), Positives = 66/103 (64%), Gaps = 3/103 (2%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
+ L + A DNAY PYS+ VGAAL D T+F GCN+ENA+Y ++ AE+ AI++A+
Sbjct: 3 EALVERARDALDNAYTPYSEYTVGAALRTADGTVFVGCNIENANYSNSLHAEEVAIAEAV 62
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDI 119
G T+F RI V++ D V+PCG CRQ +AEF+ +I
Sbjct: 63 KNGHTEFDRIVVTSGARDG---VTPCGMCRQTLAEFADEDLEI 102
>gi|6478520|gb|AAF13876.1|AF187304_1 cytidine deaminase [Bacillus caldolyticus]
gi|5689607|emb|CAB51902.1| cytidine deaminase [Bacillus caldolyticus]
Length = 132
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/88 (53%), Positives = 64/88 (72%), Gaps = 3/88 (3%)
Query: 25 QARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQTKFK 84
+AR+ AY PYSK VGAALL + +++ GCN+ENA+Y + CAE+TA+ KA SEG+ +F
Sbjct: 12 KARELAYVPYSKFPVGAALLTKGGSVYRGCNIENAAYSVCNCAERTALFKAYSEGEKEFT 71
Query: 85 RIAVSAILPDSNKFVSPCGSCRQVIAEF 112
+AV A D+ + V PCG+CRQVIAE
Sbjct: 72 ALAVIA---DTPRPVPPCGACRQVIAEL 96
>gi|433655875|ref|YP_007299583.1| cytidine deaminase, homotetrameric [Thermoanaerobacterium
thermosaccharolyticum M0795]
gi|433294064|gb|AGB19886.1| cytidine deaminase, homotetrameric [Thermoanaerobacterium
thermosaccharolyticum M0795]
Length = 133
Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/107 (45%), Positives = 69/107 (64%), Gaps = 5/107 (4%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
Q L ++ +AR+ AY PYS +VGA ++ + + GCN+EN+SYG+T CAE+TA+ A
Sbjct: 4 QKLLEMAKEAREKAYVPYSHFKVGACVITDNGNTYKGCNIENSSYGLTNCAERTALFNAY 63
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLI 123
S G K K IAV A D++ VSPCGSCRQV+ E D+ V++
Sbjct: 64 SNGDRKIKAIAVVA---DTDGPVSPCGSCRQVMYELGGE--DLTVIL 105
>gi|448576121|ref|ZP_21642164.1| cytidine deaminase [Haloferax larsenii JCM 13917]
gi|445729801|gb|ELZ81395.1| cytidine deaminase [Haloferax larsenii JCM 13917]
Length = 140
Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/103 (45%), Positives = 66/103 (64%), Gaps = 3/103 (2%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
+ L + A DNAY PYS+ VGAAL D T+F GCN+ENA+Y ++ AE+ AI++A+
Sbjct: 3 EALVERARDALDNAYTPYSEYTVGAALRTADGTVFVGCNIENANYSNSLHAEEVAIAEAV 62
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDI 119
G T+F RI V++ D V+PCG CRQ +AEF+ +I
Sbjct: 63 KNGHTEFDRIVVTSGARDG---VTPCGMCRQTLAEFADEDLEI 102
>gi|257783956|ref|YP_003179173.1| cytidine deaminase [Atopobium parvulum DSM 20469]
gi|257472463|gb|ACV50582.1| cytidine deaminase [Atopobium parvulum DSM 20469]
Length = 181
Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/114 (44%), Positives = 73/114 (64%), Gaps = 5/114 (4%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
+ L L+I+AR++AY PYS VGAALLC D T++ G N+ENA+Y + CAE+TA +A+
Sbjct: 13 EALVQLAIEARNHAYVPYSHYAVGAALLCSDGTVYGGANLENAAYTPSNCAERTAFFRAV 72
Query: 77 SEGQTKFKRIAVSAILPDS---NKFVSPCGSCRQVIAEFSSPACDIQVLIVKSD 127
EG F IAV P+ + +PCG CRQVI E+ PA ++++ K+D
Sbjct: 73 FEGHRDFVAIAVVG-GPEGEAPTAWCTPCGVCRQVIREWCDPA-TFRIVLGKAD 124
>gi|443326629|ref|ZP_21055276.1| cytidine deaminase [Xenococcus sp. PCC 7305]
gi|442793750|gb|ELS03190.1| cytidine deaminase [Xenococcus sp. PCC 7305]
Length = 135
Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/90 (57%), Positives = 62/90 (68%), Gaps = 2/90 (2%)
Query: 25 QARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAIS-EGQTKF 83
QA N+Y PYS+ VGAALL Q IF GCNVEN SYG+TICAE+ AI+ A++ EG +
Sbjct: 18 QAYQNSYAPYSQFPVGAALLTQQGNIFAGCNVENISYGLTICAERNAIASAVAAEGGQQM 77
Query: 84 KRIAVSAILPDSNKFVSPCGSCRQVIAEFS 113
K AV AI SPCG+CRQVIAEF+
Sbjct: 78 KIQAV-AIANKRQIPCSPCGACRQVIAEFA 106
>gi|317159329|ref|XP_003191056.1| cytidine deaminase [Aspergillus oryzae RIB40]
Length = 148
Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/103 (47%), Positives = 63/103 (61%), Gaps = 3/103 (2%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
Q LA+ +I A+ AYCPYSK +VGA +L Q G NVENASY + CAE+ A A+
Sbjct: 14 QTLASKAIAAKATAYCPYSKFRVGACILTQSGEYIVGANVENASYPVGTCAERVAFGTAV 73
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDI 119
G FK +AV+ DSN SPCG CRQ + EF++P+ I
Sbjct: 74 VAGYHDFKAVAVAT---DSNPPASPCGMCRQFMNEFTTPSFPI 113
>gi|352086229|ref|ZP_08953770.1| cytidine deaminase [Rhodanobacter sp. 2APBS1]
gi|351679528|gb|EHA62665.1| cytidine deaminase [Rhodanobacter sp. 2APBS1]
Length = 139
Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 50/119 (42%), Positives = 74/119 (62%), Gaps = 1/119 (0%)
Query: 18 NLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAIS 77
+L L+ AR+ AY PYS VGAALL +D F+GCNVENASYG+ CAE+TA+ A++
Sbjct: 11 DLLALARSAREQAYAPYSNFAVGAALLTRDGRRFSGCNVENASYGLCNCAERTALFNAVA 70
Query: 78 EGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQVGLITI 136
G +A+ A++ D++ VSPCG+CRQV++E A + + + D Q + +
Sbjct: 71 AGCRPGDFVAI-AVIADTDNPVSPCGACRQVMSELCDDAMPVLLANLHGDTRQTTVTAL 128
>gi|432329435|ref|YP_007247579.1| cytidine deaminase, homotetrameric [Aciduliprofundum sp. MAR08-339]
gi|432136144|gb|AGB05413.1| cytidine deaminase, homotetrameric [Aciduliprofundum sp. MAR08-339]
Length = 132
Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/102 (50%), Positives = 66/102 (64%), Gaps = 6/102 (5%)
Query: 18 NLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAIS 77
NL ++ +AR+ AY PYS +VGAA++ +FTGCNVENASYG+TICAE+ AI KAIS
Sbjct: 10 NLIEMAKKAREKAYAPYSNFRVGAAVVACG-KVFTGCNVENASYGLTICAERVAIFKAIS 68
Query: 78 EGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDI 119
EG +RIA+ A PCG+C QV+ EF C I
Sbjct: 69 EGCRNIERIAIYA-----ENMPYPCGACLQVMDEFCKDNCQI 105
>gi|304317650|ref|YP_003852795.1| cytidine deaminase [Thermoanaerobacterium thermosaccharolyticum DSM
571]
gi|302779152|gb|ADL69711.1| cytidine deaminase [Thermoanaerobacterium thermosaccharolyticum DSM
571]
Length = 133
Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/107 (45%), Positives = 69/107 (64%), Gaps = 5/107 (4%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
Q L ++ +AR+ AY PYS +VGA ++ + + GCN+EN+SYG+T CAE+TA+ A
Sbjct: 4 QKLLEMAKEAREKAYVPYSHFKVGACVITGNGNTYKGCNIENSSYGLTNCAERTALFNAY 63
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLI 123
S G K K IAV A D++ VSPCGSCRQV+ E D+ V++
Sbjct: 64 SNGDRKIKAIAVVA---DTDGPVSPCGSCRQVMYELGGE--DLTVIL 105
>gi|426404371|ref|YP_007023342.1| hypothetical protein Bdt_2392 [Bdellovibrio bacteriovorus str.
Tiberius]
gi|425861039|gb|AFY02075.1| hypothetical protein Bdt_2392 [Bdellovibrio bacteriovorus str.
Tiberius]
Length = 134
Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/103 (47%), Positives = 67/103 (65%), Gaps = 2/103 (1%)
Query: 12 LDPIEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTA 71
++ ++ L + +A+ A+ PYS +GAA+L D IF GCNVENASYG T+CAE+ A
Sbjct: 1 MNDTQKKLFEAACKAQKKAHAPYSDALIGAAVLMSDGQIFNGCNVENASYGGTVCAERVA 60
Query: 72 ISKAISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSS 114
I KA+SEG K I ++ D+ K PCG CRQVIAEF++
Sbjct: 61 IFKAVSEGAHKL--IKEVLVVSDAEKPWPPCGFCRQVIAEFAN 101
>gi|163796241|ref|ZP_02190202.1| cytidine deaminase [alpha proteobacterium BAL199]
gi|159178383|gb|EDP62925.1| cytidine deaminase [alpha proteobacterium BAL199]
Length = 183
Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/125 (48%), Positives = 75/125 (60%), Gaps = 20/125 (16%)
Query: 12 LDPIEQ-NLANLSIQARDNAYCPYSKLQVGAALLCQDD---TIFTGCNVENASYGMTICA 67
+DP E +L N + A D A+ PYSK VGAAL+ DD +FTG NVENA+YG TICA
Sbjct: 40 VDPQELVDLRNAARSAADRAHAPYSKFTVGAALIMADDPERRVFTGANVENATYGATICA 99
Query: 68 EKTAISKAISEGQTKFKRIAVSAI---------LPDSNKFVSPCGSCRQVIAEFSSPACD 118
E+T I++A + G F+RIA+ A+ L D SPCG CRQ IAEFS+
Sbjct: 100 ERTVIAQAAAAG---FRRIAILAVSCTKALHARLADR----SPCGICRQTIAEFSTDVPP 152
Query: 119 IQVLI 123
VLI
Sbjct: 153 SLVLI 157
>gi|157364141|ref|YP_001470908.1| cytidine deaminase [Thermotoga lettingae TMO]
gi|157314745|gb|ABV33844.1| cytidine deaminase [Thermotoga lettingae TMO]
Length = 127
Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/109 (44%), Positives = 71/109 (65%), Gaps = 8/109 (7%)
Query: 19 LANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISE 78
L L+I A AY PYS +VGA ++ + IFTGCNVENASYG++ICAE+ AI I+
Sbjct: 6 LIELAIDAMKRAYVPYSNFRVGAVVVSKSGKIFTGCNVENASYGLSICAERVAIFSTIAS 65
Query: 79 GQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSD 127
G+ K + V+ D+ + VSPCG+CRQV++EF D +V++ ++
Sbjct: 66 GEEIEKLVVVA----DTPQPVSPCGACRQVMSEFG----DFEVVLANTN 106
>gi|42523887|ref|NP_969267.1| hypothetical protein Bd2449 [Bdellovibrio bacteriovorus HD100]
gi|39576094|emb|CAE80260.1| cdd [Bdellovibrio bacteriovorus HD100]
Length = 134
Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/103 (47%), Positives = 67/103 (65%), Gaps = 2/103 (1%)
Query: 12 LDPIEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTA 71
++ ++ L + +A+ A+ PYS +GAA+L D IF GCNVENASYG T+CAE+ A
Sbjct: 1 MNDTQKKLFEAACKAQKKAHAPYSDALIGAAVLMSDGQIFNGCNVENASYGGTVCAERVA 60
Query: 72 ISKAISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSS 114
I KA+SEG K I ++ D+ K PCG CRQVIAEF++
Sbjct: 61 IFKAVSEGAQKL--IKEVLVVSDAEKPWPPCGFCRQVIAEFAN 101
>gi|346979399|gb|EGY22851.1| cytidine deaminase [Verticillium dahliae VdLs.17]
Length = 170
Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/143 (39%), Positives = 80/143 (55%), Gaps = 11/143 (7%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
Q L + S+ A+ AYCPYSK +VGA +L G N+ENASYG+ CAE+ A +KA+
Sbjct: 30 QTLHDRSVAAKSTAYCPYSKFRVGATILSNAGQFTDGANIENASYGVGTCAERVAFAKAV 89
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQVGLITI 136
EG F + V+A D VSPCG+CRQ I EF + I + +K D ++T+
Sbjct: 90 QEGIRGFSAVGVAA---DIEPTVSPCGACRQFIREFCTVETPIFMFNIKGDYV---VLTL 143
Query: 137 DGMYLTLHCCWERGNLVLPDPKL 159
D + L + G VLP P++
Sbjct: 144 DEL---LPISF--GPDVLPPPEV 161
>gi|444366600|ref|ZP_21166627.1| cytidine deaminase [Burkholderia cenocepacia K56-2Valvano]
gi|443604317|gb|ELT72261.1| cytidine deaminase [Burkholderia cenocepacia K56-2Valvano]
Length = 129
Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 50/100 (50%), Positives = 69/100 (69%), Gaps = 7/100 (7%)
Query: 26 ARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQT--KF 83
AR+ AY PYS+ +VGAAL +D T+ GCNVENASYG+ CAE+TA+ AI+ G F
Sbjct: 13 ARERAYAPYSRFKVGAALQARDGTVSHGCNVENASYGLCNCAERTALFAAIAAGYRPGDF 72
Query: 84 KRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLI 123
R+AV + D++ ++PCG+CRQVI E P DI+V++
Sbjct: 73 ARLAV---VGDTDGPIAPCGACRQVIIEIGKP--DIEVIL 107
>gi|354558006|ref|ZP_08977263.1| cytidine deaminase [Desulfitobacterium metallireducens DSM 15288]
gi|353549680|gb|EHC19121.1| cytidine deaminase [Desulfitobacterium metallireducens DSM 15288]
Length = 138
Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/110 (44%), Positives = 70/110 (63%), Gaps = 6/110 (5%)
Query: 4 HDIMEFSALDPIEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGM 63
HD +E + D ++ L L+ A AY PYS VGAA L IF GCNVENAS+G+
Sbjct: 3 HD-LEITPED--QKELIRLAQSAYAEAYVPYSHYPVGAATLWSSGEIFAGCNVENASFGL 59
Query: 64 TICAEKTAISKAISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFS 113
T+CAE+ +I +A+++G+ K K +A++ + F SPCG+CRQV EF+
Sbjct: 60 TVCAERNSIFQAVAQGERKLKAVAIAV---PTETFPSPCGACRQVFREFA 106
>gi|387886837|ref|YP_006317136.1| cytidine deaminase [Francisella noatunensis subsp. orientalis str.
Toba 04]
gi|386871653|gb|AFJ43660.1| cytidine deaminase [Francisella noatunensis subsp. orientalis str.
Toba 04]
Length = 133
Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 52/107 (48%), Positives = 68/107 (63%), Gaps = 5/107 (4%)
Query: 15 IEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISK 74
I L + +IQA +NAY PYSK VGA LL +D +I G NVENASYG+ CAE+T +
Sbjct: 5 INNKLIDAAIQAAENAYTPYSKFNVGATLLMKDGSILKGANVENASYGLCNCAERTVLFY 64
Query: 75 AISEGQTK--FKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDI 119
A ++G K K++AV A P+ VSPCG+CRQV++E C I
Sbjct: 65 AYAQGYRKEDIKKLAVVADTPEG---VSPCGACRQVMSELLDLECPI 108
>gi|336368596|gb|EGN96939.1| hypothetical protein SERLA73DRAFT_170284 [Serpula lacrymans var.
lacrymans S7.3]
gi|336381379|gb|EGO22531.1| hypothetical protein SERLADRAFT_451367 [Serpula lacrymans var.
lacrymans S7.9]
Length = 155
Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/136 (46%), Positives = 75/136 (55%), Gaps = 7/136 (5%)
Query: 6 IMEFSALDPIEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTI 65
I E S D + L SI+A+ AY YS VGAALL D I G NVENASYG TI
Sbjct: 4 INEISPAD--RERLIRGSIEAKKFAYSRYSNFHVGAALLTTDGQIIRGANVENASYGGTI 61
Query: 66 CAEKTAISKAISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVK 125
CAE+TA+ KA+SEG F +AV + D SPCG CRQ I EF A ++ + +V
Sbjct: 62 CAERTALVKAVSEGIKDFVALAV---VSDIASPCSPCGICRQFIREFC--ALEMPIYLVP 116
Query: 126 SDRSQVGLITIDGMYL 141
D Q G DG L
Sbjct: 117 VDYPQTGDGVKDGGVL 132
>gi|259486689|tpe|CBF84747.1| TPA: cytidine deaminase, putative (AFU_orthologue; AFUA_8G02770)
[Aspergillus nidulans FGSC A4]
Length = 138
Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 48/96 (50%), Positives = 62/96 (64%), Gaps = 3/96 (3%)
Query: 19 LANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISE 78
LA+ + A++ AYCPYSK +VGAALL Q FTG NVENASY + CAE+ A A+
Sbjct: 12 LASKANAAKEAAYCPYSKFRVGAALLTQSGEFFTGANVENASYPVGTCAERVAFGTAVVA 71
Query: 79 GQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSS 114
G +FK IAV+ D SPCG CRQ ++EF++
Sbjct: 72 GHRRFKAIAVAT---DIKPPASPCGMCRQFMSEFTT 104
>gi|389807595|ref|ZP_10204184.1| cytidine deaminase [Rhodanobacter thiooxydans LCS2]
gi|388443919|gb|EIM00051.1| cytidine deaminase [Rhodanobacter thiooxydans LCS2]
Length = 138
Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 50/119 (42%), Positives = 74/119 (62%), Gaps = 1/119 (0%)
Query: 18 NLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAIS 77
+L L+ AR+ AY PYS VGAALL +D F+GCNVENASYG+ CAE+TA+ A++
Sbjct: 10 DLLALARAAREQAYAPYSNFAVGAALLTRDGRRFSGCNVENASYGLCNCAERTALFNAVA 69
Query: 78 EGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQVGLITI 136
G +A+ A++ D++ VSPCG+CRQV++E A + + + D Q + +
Sbjct: 70 AGCRPGDFVAI-AVVADTDNPVSPCGACRQVMSELCDDAMPVLLANLHGDTRQTTVTAL 127
>gi|429765997|ref|ZP_19298273.1| cytidine deaminase [Clostridium celatum DSM 1785]
gi|429185382|gb|EKY26364.1| cytidine deaminase [Clostridium celatum DSM 1785]
Length = 140
Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 53/111 (47%), Positives = 68/111 (61%), Gaps = 11/111 (9%)
Query: 23 SIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQTK 82
+ A+ Y PYS VGAALLC D TI+ GCN+ENA++ T CAE+TA KAISEGQ
Sbjct: 11 AFDAQKFCYTPYSNFNVGAALLCSDGTIYQGCNIENAAFTPTNCAERTAFFKAISEGQKD 70
Query: 83 FKRIAVSAILPDSNK----FVSPCGSCRQVIAEFSSPACDI---QVLIVKS 126
F IA+ D + F +PC CRQV+AEF CD+ +++I KS
Sbjct: 71 FTAIAIVGNKKDVKQGEGDFCAPCAVCRQVMAEF----CDLKTFKIIIAKS 117
>gi|255974684|ref|ZP_05425270.1| cytidine deaminase [Enterococcus faecalis T2]
gi|255967556|gb|EET98178.1| cytidine deaminase [Enterococcus faecalis T2]
Length = 131
Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 48/113 (42%), Positives = 73/113 (64%), Gaps = 5/113 (4%)
Query: 15 IEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISK 74
++Q + +++A +AY PYS VGA L+ D ++ G N+ENAS+G+T CAE+TAI K
Sbjct: 3 VKQEWLDCAVEALAHAYVPYSNFPVGACLVTSDGKMYQGVNIENASFGLTNCAERTAIFK 62
Query: 75 AISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSD 127
AISE + F+ + V+ ++ +SPCG+CRQV+AEF P + V +V D
Sbjct: 63 AISEDERTFQHLVVAG---NTEAPISPCGACRQVMAEFFDP--QMPVTLVGKD 110
>gi|171184527|ref|YP_001793446.1| cytidine deaminase [Pyrobaculum neutrophilum V24Sta]
gi|170933739|gb|ACB39000.1| cytidine deaminase [Pyrobaculum neutrophilum V24Sta]
Length = 131
Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 51/105 (48%), Positives = 67/105 (63%), Gaps = 8/105 (7%)
Query: 26 ARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQTKFKR 85
A NAY PYS +V AA+ + I+TG NVENASYG+TICAE+ A+ KA+SEG +
Sbjct: 8 ALKNAYAPYSNFRVAAAVRTKSGRIYTGVNVENASYGLTICAERVAVFKAVSEGDRDIEA 67
Query: 86 IAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQ 130
+ V D+ + PCG+CRQVIAEF+ A LIV + RS+
Sbjct: 68 VVVYT---DTEEPTPPCGACRQVIAEFNPDA-----LIVMAGRSR 104
>gi|406981485|gb|EKE02950.1| hypothetical protein ACD_20C00302G0011 [uncultured bacterium]
Length = 130
Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 50/100 (50%), Positives = 68/100 (68%), Gaps = 2/100 (2%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
+ L ++ +A NAY PYSK VGA L +D +++ GCNVEN+SYG+T CAE+TAIS AI
Sbjct: 7 KYLLTIASEASGNAYAPYSKFLVGACALFEDGSVYKGCNVENSSYGLTTCAERTAISAAI 66
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPA 116
++G+ K A++ P+S K PCG+CRQ I EFS A
Sbjct: 67 ADGK-KTGLTAIAIYSPNS-KLCYPCGACRQWITEFSKNA 104
>gi|313232946|emb|CBY19491.1| unnamed protein product [Oikopleura dioica]
Length = 157
Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 47/128 (36%), Positives = 77/128 (60%), Gaps = 15/128 (11%)
Query: 25 QARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQTKFK 84
Q+ +NAY PYSK +VGA+LL D I TGCNVEN +YG T CAE+T++ KA+SEG KF
Sbjct: 22 QSLENAYAPYSKFRVGASLLTTDGQIITGCNVENLAYGSTTCAERTSVCKAVSEGYRKFS 81
Query: 85 RIAVSAI-----------LPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQVGL 133
++++ L D ++ PCG+CR + EF D+ +++ K++ + +
Sbjct: 82 ACLITSLVQFCKVLNIYKLRDLKDWIFPCGNCRTTLEEFG----DLTLILSKNEGQETKI 137
Query: 134 ITIDGMYL 141
+ + +++
Sbjct: 138 MKLSEIHV 145
>gi|18312182|ref|NP_558849.1| cytidine deaminase [Pyrobaculum aerophilum str. IM2]
gi|18159619|gb|AAL63031.1| cytidine deaminase [Pyrobaculum aerophilum str. IM2]
Length = 127
Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 50/115 (43%), Positives = 72/115 (62%), Gaps = 8/115 (6%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
++L ++ D AY PYSK +V + + + I+TG N+ENASYG+TICAE+ A+ KA+
Sbjct: 2 EDLVKIATNIIDRAYAPYSKFKVASIVKTKSGKIYTGVNIENASYGLTICAERVAVFKAV 61
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQV 131
SEG + I I D+++ PCG+CRQVIAEF+ A LIV + R +V
Sbjct: 62 SEGD---RDIDTVIIYTDTDEPTPPCGACRQVIAEFNPNA-----LIVMASRKKV 108
>gi|119872593|ref|YP_930600.1| cytidine deaminase [Pyrobaculum islandicum DSM 4184]
gi|119674001|gb|ABL88257.1| cytidine deaminase [Pyrobaculum islandicum DSM 4184]
Length = 138
Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/104 (47%), Positives = 68/104 (65%), Gaps = 8/104 (7%)
Query: 28 DNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQTKFKRIA 87
+NAY PYS +V A + + ++TG NVENASYG+TICAE+ A+ KA+SEG + I
Sbjct: 27 NNAYAPYSNFKVAAVVKTKSGKVYTGVNVENASYGLTICAERVAVFKAVSEGD---RDID 83
Query: 88 VSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQV 131
V + D+ + PCG+CRQVIAEF+ A LIV + R++V
Sbjct: 84 VVVVYTDTEEPTPPCGACRQVIAEFNPDA-----LIVMASRTKV 122
>gi|256960694|ref|ZP_05564865.1| cytidine deaminase [Enterococcus faecalis Merz96]
gi|257418724|ref|ZP_05595718.1| cytidine deaminase [Enterococcus faecalis T11]
gi|397698706|ref|YP_006536494.1| cytidine deaminase [Enterococcus faecalis D32]
gi|256951190|gb|EEU67822.1| cytidine deaminase [Enterococcus faecalis Merz96]
gi|257160552|gb|EEU90512.1| cytidine deaminase [Enterococcus faecalis T11]
gi|397335345|gb|AFO43017.1| cytidine deaminase [Enterococcus faecalis D32]
Length = 131
Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 48/113 (42%), Positives = 73/113 (64%), Gaps = 5/113 (4%)
Query: 15 IEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISK 74
++Q + +++A +AY PYS VGA L+ D ++ G N+ENAS+G+T CAE+TAI K
Sbjct: 3 VKQEWLDCAVEALAHAYVPYSNFPVGACLVTTDGKMYQGVNIENASFGLTNCAERTAIFK 62
Query: 75 AISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSD 127
AISE + F+ + V+ ++ +SPCG+CRQV+AEF P + V +V D
Sbjct: 63 AISEDERTFQHLVVAG---NTEAPISPCGACRQVMAEFFDP--QMPVTLVGKD 110
>gi|389799438|ref|ZP_10202427.1| cytidine deaminase [Rhodanobacter sp. 116-2]
gi|388442626|gb|EIL98810.1| cytidine deaminase [Rhodanobacter sp. 116-2]
Length = 138
Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 50/119 (42%), Positives = 74/119 (62%), Gaps = 1/119 (0%)
Query: 18 NLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAIS 77
+L L+ AR+ AY PYS VGAALL +D F+GCNVENASYG+ CAE+TA+ A++
Sbjct: 10 DLLALARSAREQAYAPYSNFLVGAALLTRDGRRFSGCNVENASYGLCNCAERTALFNAVA 69
Query: 78 EGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQVGLITI 136
G +A+ A++ D++ VSPCG+CRQV++E A + + + D Q + +
Sbjct: 70 AGCRPGDFVAI-AVIADTDNPVSPCGACRQVMSELCDDAMPVLLANLHGDTRQTTVTAL 127
>gi|256855138|ref|ZP_05560499.1| cytidine deaminase [Enterococcus faecalis T8]
gi|257088625|ref|ZP_05582986.1| cytidine deaminase [Enterococcus faecalis CH188]
gi|256709651|gb|EEU24698.1| cytidine deaminase [Enterococcus faecalis T8]
gi|256997437|gb|EEU83957.1| cytidine deaminase [Enterococcus faecalis CH188]
Length = 135
Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 48/113 (42%), Positives = 73/113 (64%), Gaps = 5/113 (4%)
Query: 15 IEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISK 74
++Q + +++A +AY PYS VGA L+ D ++ G N+ENAS+G+T CAE+TAI K
Sbjct: 7 VKQEWLDCAVEALAHAYVPYSNFPVGACLVTTDGKMYQGVNIENASFGLTNCAERTAIFK 66
Query: 75 AISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSD 127
AISE + F+ + V+ ++ +SPCG+CRQV+AEF P + V +V D
Sbjct: 67 AISEDERTFQHLVVAG---NTEAPISPCGACRQVMAEFFDP--QMPVTLVGKD 114
>gi|196234359|ref|ZP_03133187.1| cytidine deaminase [Chthoniobacter flavus Ellin428]
gi|196221551|gb|EDY16093.1| cytidine deaminase [Chthoniobacter flavus Ellin428]
Length = 130
Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 48/89 (53%), Positives = 66/89 (74%), Gaps = 3/89 (3%)
Query: 25 QARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQTKFK 84
+ R AY PYS+ QVGAAL + +F GCNVEN S+G+TICAE+ A+ A++ G+T+F+
Sbjct: 12 EVRTKAYAPYSRFQVGAALRTKSGRVFCGCNVENLSFGLTICAERAAVFAAVAAGETEFE 71
Query: 85 RIAVSAILPDSNKFVSPCGSCRQVIAEFS 113
IAV A DS + V+PCG+CRQV+AEF+
Sbjct: 72 AIAVVA---DSVQPVTPCGACRQVLAEFA 97
>gi|345859664|ref|ZP_08812001.1| cytidine deaminase [Desulfosporosinus sp. OT]
gi|344327260|gb|EGW38701.1| cytidine deaminase [Desulfosporosinus sp. OT]
Length = 147
Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 50/111 (45%), Positives = 70/111 (63%), Gaps = 6/111 (5%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
Q L + + A AY PYS VGAA L I+ GCNVENASYG+T+CAE+ AI +A+
Sbjct: 19 QELIDQAQAAYRQAYVPYSHYPVGAAALFSSGVIYGGCNVENASYGLTVCAERNAIFQAV 78
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSD 127
+ G+ + K IA++ ++ F SPCG+CRQVI EF A D V+++ +
Sbjct: 79 AHGERELKGIAIAV---PTDVFPSPCGACRQVIREF---AVDCPVILINGE 123
>gi|307278578|ref|ZP_07559649.1| cytidine deaminase [Enterococcus faecalis TX0860]
gi|306504744|gb|EFM73943.1| cytidine deaminase [Enterococcus faecalis TX0860]
Length = 154
Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 48/113 (42%), Positives = 73/113 (64%), Gaps = 5/113 (4%)
Query: 15 IEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISK 74
++Q + +++A +AY PYS VGA L+ D ++ G N+ENAS+G+T CAE+TAI K
Sbjct: 26 VKQEWLDCAVEALAHAYVPYSNFPVGACLVTSDGKMYQGVNIENASFGLTNCAERTAIFK 85
Query: 75 AISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSD 127
AISE + F+ + V+ ++ +SPCG+CRQV+AEF P + V +V D
Sbjct: 86 AISEDERTFQHLVVAG---NTEAPISPCGACRQVMAEFFDP--QMPVTLVGKD 133
>gi|355670668|ref|ZP_09057415.1| cytidine deaminase [Clostridium citroniae WAL-17108]
gi|354816105|gb|EHF00694.1| cytidine deaminase [Clostridium citroniae WAL-17108]
Length = 141
Score = 96.3 bits (238), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 48/113 (42%), Positives = 71/113 (62%), Gaps = 4/113 (3%)
Query: 16 EQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKA 75
+Q L +++ +Y PYS V AALLC D T++TG N+ENA+Y ++CAE+ AI KA
Sbjct: 3 KQKLIQMAVDGLGRSYAPYSHFHVSAALLCADGTVYTGNNIENAAYTPSVCAERCAIFKA 62
Query: 76 ISEGQTKFKRIAVSAILPDS--NKFVSPCGSCRQVIAEFSSPACDIQVLIVKS 126
+ +G+ +F+ IAV PD + PCG CRQV+ EF P+ +VL+ K+
Sbjct: 63 VGDGRREFEAIAVCG-GPDGVIEDYCPPCGVCRQVMREFCDPS-SFRVLVAKT 113
>gi|384109763|ref|ZP_10010627.1| cytidine deaminase, homotetrameric [Treponema sp. JC4]
gi|383868675|gb|EID84310.1| cytidine deaminase, homotetrameric [Treponema sp. JC4]
Length = 147
Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 52/123 (42%), Positives = 76/123 (61%), Gaps = 6/123 (4%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
+ L + + D +Y PYS+ VGAALL ++ I+TGCN+ENAS+G T CAE+TA+ KA+
Sbjct: 10 ETLIENAFRMLDFSYVPYSRYTVGAALLAKNGKIYTGCNIENASFGPTNCAERTALFKAV 69
Query: 77 SEGQTKFKRIA-VSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQ-VLIVKSDRSQVGLI 134
SEG +FK IA V + +PCG CRQ + EF CD + I+ +++ L+
Sbjct: 70 SEGVKEFKAIAVVGGPQKKITGWCTPCGVCRQALREF----CDGDFIFILAKSKNEYRLM 125
Query: 135 TID 137
T+D
Sbjct: 126 TMD 128
>gi|227519966|ref|ZP_03950015.1| cytidine deaminase [Enterococcus faecalis TX0104]
gi|229550577|ref|ZP_04439302.1| cytidine deaminase [Enterococcus faecalis ATCC 29200]
gi|293384752|ref|ZP_06630605.1| cytidine deaminase [Enterococcus faecalis R712]
gi|293388032|ref|ZP_06632561.1| cytidine deaminase [Enterococcus faecalis S613]
gi|307287045|ref|ZP_07567118.1| cytidine deaminase [Enterococcus faecalis TX0109]
gi|307291617|ref|ZP_07571493.1| cytidine deaminase [Enterococcus faecalis TX0411]
gi|312903904|ref|ZP_07763075.1| cytidine deaminase [Enterococcus faecalis TX0635]
gi|312908681|ref|ZP_07767622.1| cytidine deaminase [Enterococcus faecalis DAPTO 512]
gi|312909171|ref|ZP_07768029.1| cytidine deaminase [Enterococcus faecalis DAPTO 516]
gi|422686509|ref|ZP_16744706.1| cytidine deaminase [Enterococcus faecalis TX4000]
gi|422687547|ref|ZP_16745723.1| cytidine deaminase [Enterococcus faecalis TX0630]
gi|422702691|ref|ZP_16760520.1| cytidine deaminase [Enterococcus faecalis TX1302]
gi|422733203|ref|ZP_16789524.1| cytidine deaminase [Enterococcus faecalis TX0645]
gi|424678827|ref|ZP_18115665.1| cytidine deaminase [Enterococcus faecalis ERV103]
gi|424679793|ref|ZP_18116607.1| cytidine deaminase [Enterococcus faecalis ERV116]
gi|424684200|ref|ZP_18120926.1| cytidine deaminase [Enterococcus faecalis ERV129]
gi|424688358|ref|ZP_18124964.1| cytidine deaminase [Enterococcus faecalis ERV25]
gi|424691474|ref|ZP_18127997.1| cytidine deaminase [Enterococcus faecalis ERV31]
gi|424695044|ref|ZP_18131428.1| cytidine deaminase [Enterococcus faecalis ERV37]
gi|424696564|ref|ZP_18132909.1| cytidine deaminase [Enterococcus faecalis ERV41]
gi|424701802|ref|ZP_18137968.1| cytidine deaminase [Enterococcus faecalis ERV62]
gi|424705011|ref|ZP_18141097.1| cytidine deaminase [Enterococcus faecalis ERV63]
gi|424706284|ref|ZP_18142291.1| cytidine deaminase [Enterococcus faecalis ERV65]
gi|424718974|ref|ZP_18148202.1| cytidine deaminase [Enterococcus faecalis ERV68]
gi|424719895|ref|ZP_18149021.1| cytidine deaminase [Enterococcus faecalis ERV72]
gi|424722820|ref|ZP_18151845.1| cytidine deaminase [Enterococcus faecalis ERV73]
gi|424733377|ref|ZP_18161937.1| cytidine deaminase [Enterococcus faecalis ERV81]
gi|424735301|ref|ZP_18163771.1| cytidine deaminase [Enterococcus faecalis ERV85]
gi|424754644|ref|ZP_18182553.1| cytidine deaminase [Enterococcus faecalis ERV93]
gi|227072514|gb|EEI10477.1| cytidine deaminase [Enterococcus faecalis TX0104]
gi|229304296|gb|EEN70292.1| cytidine deaminase [Enterococcus faecalis ATCC 29200]
gi|291077956|gb|EFE15320.1| cytidine deaminase [Enterococcus faecalis R712]
gi|291082563|gb|EFE19526.1| cytidine deaminase [Enterococcus faecalis S613]
gi|306497378|gb|EFM66919.1| cytidine deaminase [Enterococcus faecalis TX0411]
gi|306501824|gb|EFM71114.1| cytidine deaminase [Enterococcus faecalis TX0109]
gi|310625362|gb|EFQ08645.1| cytidine deaminase [Enterococcus faecalis DAPTO 512]
gi|310632738|gb|EFQ16021.1| cytidine deaminase [Enterococcus faecalis TX0635]
gi|311290513|gb|EFQ69069.1| cytidine deaminase [Enterococcus faecalis DAPTO 516]
gi|315028777|gb|EFT40709.1| cytidine deaminase [Enterococcus faecalis TX4000]
gi|315160868|gb|EFU04885.1| cytidine deaminase [Enterococcus faecalis TX0645]
gi|315165818|gb|EFU09835.1| cytidine deaminase [Enterococcus faecalis TX1302]
gi|315579400|gb|EFU91591.1| cytidine deaminase [Enterococcus faecalis TX0630]
gi|402350530|gb|EJU85432.1| cytidine deaminase [Enterococcus faecalis ERV103]
gi|402355748|gb|EJU90510.1| cytidine deaminase [Enterococcus faecalis ERV116]
gi|402360802|gb|EJU95396.1| cytidine deaminase [Enterococcus faecalis ERV25]
gi|402362029|gb|EJU96569.1| cytidine deaminase [Enterococcus faecalis ERV31]
gi|402362757|gb|EJU97275.1| cytidine deaminase [Enterococcus faecalis ERV129]
gi|402368891|gb|EJV03190.1| cytidine deaminase [Enterococcus faecalis ERV37]
gi|402370766|gb|EJV04955.1| cytidine deaminase [Enterococcus faecalis ERV62]
gi|402377606|gb|EJV11504.1| cytidine deaminase [Enterococcus faecalis ERV41]
gi|402380050|gb|EJV13819.1| cytidine deaminase [Enterococcus faecalis ERV68]
gi|402380621|gb|EJV14371.1| cytidine deaminase [Enterococcus faecalis ERV63]
gi|402388092|gb|EJV21541.1| cytidine deaminase [Enterococcus faecalis ERV65]
gi|402392085|gb|EJV25361.1| cytidine deaminase [Enterococcus faecalis ERV81]
gi|402394858|gb|EJV28005.1| cytidine deaminase [Enterococcus faecalis ERV72]
gi|402400742|gb|EJV33551.1| cytidine deaminase [Enterococcus faecalis ERV73]
gi|402403093|gb|EJV35785.1| cytidine deaminase [Enterococcus faecalis ERV93]
gi|402404191|gb|EJV36822.1| cytidine deaminase [Enterococcus faecalis ERV85]
Length = 154
Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 48/113 (42%), Positives = 73/113 (64%), Gaps = 5/113 (4%)
Query: 15 IEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISK 74
++Q + +++A +AY PYS VGA L+ D ++ G N+ENAS+G+T CAE+TAI K
Sbjct: 26 VKQEWLDCAVEALAHAYVPYSNFPVGACLVTTDGKMYQGVNIENASFGLTNCAERTAIFK 85
Query: 75 AISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSD 127
AISE + F+ + V+ ++ +SPCG+CRQV+AEF P + V +V D
Sbjct: 86 AISEDERTFQHLVVAG---NTEAPISPCGACRQVMAEFFDP--QMPVTLVGKD 133
>gi|29374825|ref|NP_813978.1| cytidine deaminase [Enterococcus faecalis V583]
gi|255971679|ref|ZP_05422265.1| cytidine deaminase [Enterococcus faecalis T1]
gi|256761977|ref|ZP_05502557.1| cytidine deaminase [Enterococcus faecalis T3]
gi|256964107|ref|ZP_05568278.1| cytidine deaminase [Enterococcus faecalis HIP11704]
gi|257081470|ref|ZP_05575831.1| cytidine deaminase [Enterococcus faecalis E1Sol]
gi|257084120|ref|ZP_05578481.1| cytidine deaminase [Enterococcus faecalis Fly1]
gi|257087947|ref|ZP_05582308.1| cytidine deaminase [Enterococcus faecalis D6]
gi|257417551|ref|ZP_05594545.1| cytidine deaminase [Enterococcus faecalis ARO1/DG]
gi|257421470|ref|ZP_05598460.1| cytidine deaminase [Enterococcus faecalis X98]
gi|294781514|ref|ZP_06746852.1| cytidine deaminase [Enterococcus faecalis PC1.1]
gi|300862080|ref|ZP_07108160.1| cytidine deaminase [Enterococcus faecalis TUSoD Ef11]
gi|384517259|ref|YP_005704564.1| cytidine deaminase [Enterococcus faecalis 62]
gi|428765804|ref|YP_007151915.1| cytidine deaminase [Enterococcus faecalis str. Symbioflor 1]
gi|430362514|ref|ZP_19427058.1| cytidine deaminase [Enterococcus faecalis OG1X]
gi|430372633|ref|ZP_19429860.1| hypothetical protein EFM7_2647 [Enterococcus faecalis M7]
gi|29342283|gb|AAO80049.1| cytidine deaminase [Enterococcus faecalis V583]
gi|255962697|gb|EET95173.1| cytidine deaminase [Enterococcus faecalis T1]
gi|256683228|gb|EEU22923.1| cytidine deaminase [Enterococcus faecalis T3]
gi|256954603|gb|EEU71235.1| cytidine deaminase [Enterococcus faecalis HIP11704]
gi|256989500|gb|EEU76802.1| cytidine deaminase [Enterococcus faecalis E1Sol]
gi|256992150|gb|EEU79452.1| cytidine deaminase [Enterococcus faecalis Fly1]
gi|256995977|gb|EEU83279.1| cytidine deaminase [Enterococcus faecalis D6]
gi|257159379|gb|EEU89339.1| cytidine deaminase [Enterococcus faecalis ARO1/DG]
gi|257163294|gb|EEU93254.1| cytidine deaminase [Enterococcus faecalis X98]
gi|294451371|gb|EFG19835.1| cytidine deaminase [Enterococcus faecalis PC1.1]
gi|295112485|emb|CBL31122.1| cytidine deaminase [Enterococcus sp. 7L76]
gi|300848605|gb|EFK76362.1| cytidine deaminase [Enterococcus faecalis TUSoD Ef11]
gi|323479392|gb|ADX78831.1| cytidine deaminase [Enterococcus faecalis 62]
gi|427183977|emb|CCO71201.1| cytidine deaminase [Enterococcus faecalis str. Symbioflor 1]
gi|429512028|gb|ELA01647.1| cytidine deaminase [Enterococcus faecalis OG1X]
gi|429514618|gb|ELA04159.1| hypothetical protein EFM7_2647 [Enterococcus faecalis M7]
Length = 131
Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 48/113 (42%), Positives = 73/113 (64%), Gaps = 5/113 (4%)
Query: 15 IEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISK 74
++Q + +++A +AY PYS VGA L+ D ++ G N+ENAS+G+T CAE+TAI K
Sbjct: 3 VKQEWLDCAVEALAHAYVPYSNFPVGACLVTADGKMYQGVNIENASFGLTNCAERTAIFK 62
Query: 75 AISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSD 127
AISE + F+ + V+ ++ +SPCG+CRQV+AEF P + V +V D
Sbjct: 63 AISEDERTFQHLVVAG---NTEAPISPCGACRQVMAEFFDP--QMPVTLVGKD 110
>gi|374296065|ref|YP_005046256.1| cytidine deaminase [Clostridium clariflavum DSM 19732]
gi|359825559|gb|AEV68332.1| cytidine deaminase, homotetrameric [Clostridium clariflavum DSM
19732]
Length = 138
Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 52/121 (42%), Positives = 74/121 (61%), Gaps = 4/121 (3%)
Query: 19 LANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISE 78
L + ++QAR+ +Y PYS VGAALL +D ++TGCN+ENA+Y CAE+TA KA+SE
Sbjct: 6 LISHALQARNQSYSPYSNFAVGAALLSKDGKLYTGCNIENAAYTPGNCAERTAFFKAVSE 65
Query: 79 GQTKFKRIAV--SAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQVGLITI 136
G +F IA+ D+ +PCG CRQV+ EF P QV++ K D + T+
Sbjct: 66 GVREFSSIAIVGGPKGTDTLDLCAPCGVCRQVMMEFCDPK-TFQVILAK-DPENYEIFTL 123
Query: 137 D 137
+
Sbjct: 124 E 124
>gi|229546994|ref|ZP_04435719.1| cytidine deaminase [Enterococcus faecalis TX1322]
gi|312952575|ref|ZP_07771440.1| cytidine deaminase [Enterococcus faecalis TX0102]
gi|422691749|ref|ZP_16749778.1| cytidine deaminase [Enterococcus faecalis TX0031]
gi|422706285|ref|ZP_16763986.1| cytidine deaminase [Enterococcus faecalis TX0043]
gi|422726496|ref|ZP_16782943.1| cytidine deaminase [Enterococcus faecalis TX0312]
gi|229307922|gb|EEN73909.1| cytidine deaminase [Enterococcus faecalis TX1322]
gi|310629476|gb|EFQ12759.1| cytidine deaminase [Enterococcus faecalis TX0102]
gi|315153414|gb|EFT97430.1| cytidine deaminase [Enterococcus faecalis TX0031]
gi|315156299|gb|EFU00316.1| cytidine deaminase [Enterococcus faecalis TX0043]
gi|315158563|gb|EFU02580.1| cytidine deaminase [Enterococcus faecalis TX0312]
Length = 154
Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 48/113 (42%), Positives = 73/113 (64%), Gaps = 5/113 (4%)
Query: 15 IEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISK 74
++Q + +++A +AY PYS VGA L+ D ++ G N+ENAS+G+T CAE+TAI K
Sbjct: 26 VKQEWLDCAVEALAHAYVPYSNFPVGACLVTADGKMYQGVNIENASFGLTNCAERTAIFK 85
Query: 75 AISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSD 127
AISE + F+ + V+ ++ +SPCG+CRQV+AEF P + V +V D
Sbjct: 86 AISEDERTFQHLVVAG---NTEAPISPCGACRQVMAEFFDP--QMPVTLVGKD 133
>gi|374327716|ref|YP_005085916.1| cytidine deaminase [Pyrobaculum sp. 1860]
gi|356642985|gb|AET33664.1| cytidine deaminase [Pyrobaculum sp. 1860]
Length = 128
Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 49/106 (46%), Positives = 70/106 (66%), Gaps = 6/106 (5%)
Query: 29 NAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQTKFKRIAV 88
NAY PYSK +V A + + I+TG N+ENASYG+T+CAE+ A+ KA+SEG + I V
Sbjct: 14 NAYAPYSKFRVAAVVKTRSGKIYTGVNIENASYGLTVCAERVAVFKAVSEGD---RDIEV 70
Query: 89 SAILPDSNKFVSPCGSCRQVIAEFSSPACDI---QVLIVKSDRSQV 131
+ D+ + PCG+CRQVIAEF+ A I + +V+S+ SQ+
Sbjct: 71 VVVYTDTEEPTPPCGACRQVIAEFNPNALIIMASKKKVVESNLSQL 116
>gi|256956887|ref|ZP_05561058.1| cytidine deaminase [Enterococcus faecalis DS5]
gi|257078557|ref|ZP_05572918.1| cytidine deaminase [Enterococcus faecalis JH1]
gi|256947383|gb|EEU64015.1| cytidine deaminase [Enterococcus faecalis DS5]
gi|256986587|gb|EEU73889.1| cytidine deaminase [Enterococcus faecalis JH1]
Length = 135
Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 48/113 (42%), Positives = 73/113 (64%), Gaps = 5/113 (4%)
Query: 15 IEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISK 74
++Q + +++A +AY PYS VGA L+ D ++ G N+ENAS+G+T CAE+TAI K
Sbjct: 7 VKQEWLDCAVEALAHAYVPYSNFPVGACLVTADGKMYQGVNIENASFGLTNCAERTAIFK 66
Query: 75 AISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSD 127
AISE + F+ + V+ ++ +SPCG+CRQV+AEF P + V +V D
Sbjct: 67 AISEDERTFQHLVVAG---NTEAPISPCGACRQVMAEFFDP--QMPVTLVGKD 114
>gi|295108975|emb|CBL22928.1| cytidine deaminase [Ruminococcus obeum A2-162]
Length = 139
Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 49/119 (41%), Positives = 71/119 (59%), Gaps = 7/119 (5%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
+ + +L+I+ D +Y PYS VGAALL ++ +TGCN+ENA+Y T CAE+TA KA+
Sbjct: 7 EEMIDLAIKQLDYSYVPYSHFHVGAALLAKNGRYYTGCNIENAAYTPTNCAERTAFFKAV 66
Query: 77 SEGQTKFKRIAV----SAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQV 131
SEG +F I + +L ++ +PCG CRQV+ EF P +L V D+ V
Sbjct: 67 SEGVKEFDAICIVGGKEGVL---TEYAAPCGVCRQVMMEFCDPETFKIILAVSKDKYDV 122
>gi|227555828|ref|ZP_03985875.1| cytidine deaminase [Enterococcus faecalis HH22]
gi|307269059|ref|ZP_07550421.1| cytidine deaminase [Enterococcus faecalis TX4248]
gi|307274144|ref|ZP_07555352.1| cytidine deaminase [Enterococcus faecalis TX0855]
gi|312901150|ref|ZP_07760437.1| cytidine deaminase [Enterococcus faecalis TX0470]
gi|384512087|ref|YP_005707180.1| cytidine deaminase [Enterococcus faecalis OG1RF]
gi|422695474|ref|ZP_16753460.1| cytidine deaminase [Enterococcus faecalis TX4244]
gi|422698877|ref|ZP_16756762.1| cytidine deaminase [Enterococcus faecalis TX1346]
gi|422700141|ref|ZP_16757997.1| cytidine deaminase [Enterococcus faecalis TX1342]
gi|422709597|ref|ZP_16766978.1| cytidine deaminase [Enterococcus faecalis TX0027]
gi|422713018|ref|ZP_16769778.1| cytidine deaminase [Enterococcus faecalis TX0309A]
gi|422718165|ref|ZP_16774836.1| cytidine deaminase [Enterococcus faecalis TX0309B]
gi|422721582|ref|ZP_16778169.1| cytidine deaminase [Enterococcus faecalis TX0017]
gi|422723204|ref|ZP_16779742.1| cytidine deaminase [Enterococcus faecalis TX2137]
gi|422728350|ref|ZP_16784768.1| cytidine deaminase [Enterococcus faecalis TX0012]
gi|422742054|ref|ZP_16796069.1| cytidine deaminase [Enterococcus faecalis TX2141]
gi|422869617|ref|ZP_16916133.1| cytidine deaminase [Enterococcus faecalis TX1467]
gi|424671775|ref|ZP_18108766.1| cytidine deaminase [Enterococcus faecalis 599]
gi|227174995|gb|EEI55967.1| cytidine deaminase [Enterococcus faecalis HH22]
gi|306509106|gb|EFM78168.1| cytidine deaminase [Enterococcus faecalis TX0855]
gi|306514629|gb|EFM83182.1| cytidine deaminase [Enterococcus faecalis TX4248]
gi|311291739|gb|EFQ70295.1| cytidine deaminase [Enterococcus faecalis TX0470]
gi|315026762|gb|EFT38694.1| cytidine deaminase [Enterococcus faecalis TX2137]
gi|315031198|gb|EFT43130.1| cytidine deaminase [Enterococcus faecalis TX0017]
gi|315035967|gb|EFT47899.1| cytidine deaminase [Enterococcus faecalis TX0027]
gi|315143264|gb|EFT87280.1| cytidine deaminase [Enterococcus faecalis TX2141]
gi|315147087|gb|EFT91103.1| cytidine deaminase [Enterococcus faecalis TX4244]
gi|315151196|gb|EFT95212.1| cytidine deaminase [Enterococcus faecalis TX0012]
gi|315171349|gb|EFU15366.1| cytidine deaminase [Enterococcus faecalis TX1342]
gi|315172627|gb|EFU16644.1| cytidine deaminase [Enterococcus faecalis TX1346]
gi|315573581|gb|EFU85772.1| cytidine deaminase [Enterococcus faecalis TX0309B]
gi|315582071|gb|EFU94262.1| cytidine deaminase [Enterococcus faecalis TX0309A]
gi|327533976|gb|AEA92810.1| cytidine deaminase [Enterococcus faecalis OG1RF]
gi|329570887|gb|EGG52597.1| cytidine deaminase [Enterococcus faecalis TX1467]
gi|402358043|gb|EJU92731.1| cytidine deaminase [Enterococcus faecalis 599]
Length = 154
Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 48/113 (42%), Positives = 73/113 (64%), Gaps = 5/113 (4%)
Query: 15 IEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISK 74
++Q + +++A +AY PYS VGA L+ D ++ G N+ENAS+G+T CAE+TAI K
Sbjct: 26 VKQEWLDCAVEALAHAYVPYSNFPVGACLVTADGKMYQGVNIENASFGLTNCAERTAIFK 85
Query: 75 AISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSD 127
AISE + F+ + V+ ++ +SPCG+CRQV+AEF P + V +V D
Sbjct: 86 AISEDERTFQHLVVAG---NTEAPISPCGACRQVMAEFFDP--QMPVTLVGKD 133
>gi|344229983|gb|EGV61868.1| cytidine deaminase [Candida tenuis ATCC 10573]
Length = 145
Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 53/136 (38%), Positives = 81/136 (59%), Gaps = 9/136 (6%)
Query: 7 MEFSALDPIEQ---NLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGM 63
M+F L E L L ++AR +Y PYSK +VG L+ + +G N+ENASYG
Sbjct: 1 MKFEELPLTEAEVIKLKQLCLEARSLSYSPYSKFRVGCTLVTSEGEFISGANIENASYGG 60
Query: 64 TICAEKTAISKAISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLI 123
+ICAE++ I KA++E + KFK IA+S+ DS + +SPCG CRQ I EF +I +L+
Sbjct: 61 SICAERSTICKAVNERKYKFKVIAISS---DSQEAISPCGICRQFIREFGK---EIPILM 114
Query: 124 VKSDRSQVGLITIDGM 139
+ + L+ ++ +
Sbjct: 115 FGQEGNTHELMNLEEL 130
>gi|422735037|ref|ZP_16791317.1| cytidine deaminase [Enterococcus faecalis TX1341]
gi|315168188|gb|EFU12205.1| cytidine deaminase [Enterococcus faecalis TX1341]
Length = 166
Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 48/113 (42%), Positives = 73/113 (64%), Gaps = 5/113 (4%)
Query: 15 IEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISK 74
++Q + +++A +AY PYS VGA L+ D ++ G N+ENAS+G+T CAE+TAI K
Sbjct: 26 VKQEWLDCAVEALAHAYVPYSNFPVGACLVTADGKMYQGVNIENASFGLTNCAERTAIFK 85
Query: 75 AISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSD 127
AISE + F+ + V+ ++ +SPCG+CRQV+AEF P + V +V D
Sbjct: 86 AISEDERTFQHLVVAG---NTEAPISPCGACRQVMAEFFDP--QMPVTLVGKD 133
>gi|297526738|ref|YP_003668762.1| cytidine deaminase [Staphylothermus hellenicus DSM 12710]
gi|297255654|gb|ADI31863.1| cytidine deaminase [Staphylothermus hellenicus DSM 12710]
Length = 134
Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 50/101 (49%), Positives = 72/101 (71%), Gaps = 4/101 (3%)
Query: 29 NAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQTKFKRIAV 88
N+Y PYS + V AA+L ++ +F G NVENASYG+TICAE++AIS I+ G+ + +AV
Sbjct: 20 NSYAPYSGIHVAAAILTRNGNVFLGVNVENASYGLTICAERSAISAMITAGER--EPVAV 77
Query: 89 SAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRS 129
AI+ D +K + PCG+CRQVIAEF +P I + VK+ ++
Sbjct: 78 -AIVTDLDKPIPPCGACRQVIAEF-NPETTIIMHSVKTGKT 116
>gi|404494202|ref|YP_006718308.1| cytidine deaminase [Pelobacter carbinolicus DSM 2380]
gi|77546212|gb|ABA89774.1| cytidine deaminase [Pelobacter carbinolicus DSM 2380]
Length = 136
Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 45/101 (44%), Positives = 69/101 (68%), Gaps = 3/101 (2%)
Query: 13 DPIEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAI 72
+P + L + QA + +Y PYS+ VGAALL D +I TGCN+ENASYG+T+CAE+ A+
Sbjct: 6 EPQRRQLEQAARQAAEKSYSPYSRFAVGAALLAADGSIATGCNIENASYGLTLCAERVAM 65
Query: 73 SKAISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFS 113
++A+++GQ F IA+ ++ PCG+C Q++AEF+
Sbjct: 66 ARAVADGQRHF--IALLLFTATAHP-TPPCGACLQMLAEFA 103
>gi|417980799|ref|ZP_12621478.1| cytidine deaminase [Lactobacillus casei 12A]
gi|410524310|gb|EKP99222.1| cytidine deaminase [Lactobacillus casei 12A]
Length = 129
Score = 95.9 bits (237), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 48/97 (49%), Positives = 65/97 (67%), Gaps = 4/97 (4%)
Query: 19 LANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISE 78
L ++ AR+NAY PYS VGAA+ D IF+G NVENASYG++ CAE++AI A+S
Sbjct: 4 LRTAALAARENAYVPYSHFAVGAAVRV-GDRIFSGANVENASYGLSNCAERSAIFAAVSA 62
Query: 79 GQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSP 115
G +K + V + D+ V+PCG+CRQVI+EF P
Sbjct: 63 GYSKLDELLV---IADTKGSVAPCGACRQVISEFFGP 96
>gi|424757534|ref|ZP_18185270.1| cytidine deaminase [Enterococcus faecalis R508]
gi|402406861|gb|EJV39406.1| cytidine deaminase [Enterococcus faecalis R508]
Length = 135
Score = 95.9 bits (237), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 47/113 (41%), Positives = 73/113 (64%), Gaps = 5/113 (4%)
Query: 15 IEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISK 74
++Q + +++A +AY PYS VGA L+ D ++ G N+ENAS+G+T CAE+TAI K
Sbjct: 7 VKQEWLDCAVEALAHAYVPYSNFPVGACLVTTDGKMYQGVNIENASFGLTNCAERTAIFK 66
Query: 75 AISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSD 127
A+SE + F+ + V+ ++ +SPCG+CRQV+AEF P + V +V D
Sbjct: 67 AVSEDERTFQHLVVAG---NTEAPISPCGACRQVMAEFFDP--QMPVTLVGKD 114
>gi|218883919|ref|YP_002428301.1| cytidine deaminase [Desulfurococcus kamchatkensis 1221n]
gi|218765535|gb|ACL10934.1| cytidine deaminase [Desulfurococcus kamchatkensis 1221n]
Length = 133
Score = 95.9 bits (237), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 49/103 (47%), Positives = 69/103 (66%), Gaps = 4/103 (3%)
Query: 29 NAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQTKFKRIAV 88
N+Y PYS + V AA+L I+TG NVENASYG+TICAE++AIS ++ G+ +R
Sbjct: 20 NSYAPYSNIHVAAAVLTDKGNIYTGVNVENASYGLTICAERSAISAMVAAGE---RRPVA 76
Query: 89 SAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQV 131
A++ D + + PCG+CRQVIAEF +P I + VKS ++ V
Sbjct: 77 VAVVTDMDNPIPPCGACRQVIAEF-NPKALIIMHSVKSGKTIV 118
>gi|390938446|ref|YP_006402184.1| cytidine deaminase [Desulfurococcus fermentans DSM 16532]
gi|390191553|gb|AFL66609.1| cytidine deaminase [Desulfurococcus fermentans DSM 16532]
Length = 133
Score = 95.9 bits (237), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 51/104 (49%), Positives = 72/104 (69%), Gaps = 4/104 (3%)
Query: 28 DNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQTKFKRIA 87
N+Y PYS + V AA+L +I+TG NVENASYG+TICAE++AIS ++ G+ K +A
Sbjct: 19 SNSYAPYSNIHVAAAVLTDKGSIYTGVNVENASYGLTICAERSAISAMVAAGER--KPVA 76
Query: 88 VSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQV 131
V A++ D + + PCG+CRQVIAEF +P I + VKS ++ V
Sbjct: 77 V-AVVTDMDNPIPPCGACRQVIAEF-NPKALIIMHSVKSGKTIV 118
>gi|153811575|ref|ZP_01964243.1| hypothetical protein RUMOBE_01967 [Ruminococcus obeum ATCC 29174]
gi|149832316|gb|EDM87401.1| cytidine deaminase [Ruminococcus obeum ATCC 29174]
Length = 169
Score = 95.9 bits (237), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 50/119 (42%), Positives = 71/119 (59%), Gaps = 7/119 (5%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
+ + +L+I+ +Y PYS VGAALL ++ T +TGCN+ENA+Y T CAE+TA KA+
Sbjct: 37 EEMIDLAIKQLGYSYAPYSHFHVGAALLAKNGTYYTGCNIENAAYTPTNCAERTAFFKAV 96
Query: 77 SEGQTKFKRIAV----SAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQV 131
SEG +F+ I V +L + +PCG CRQV+ EF P +L V D+ V
Sbjct: 97 SEGVKEFQAICVVGGRDGVL---TGYAAPCGVCRQVMMEFCDPETFQIILAVSKDKYDV 152
>gi|409997365|ref|YP_006751766.1| cytidine deaminase [Lactobacillus casei W56]
gi|406358377|emb|CCK22647.1| Cytidine deaminase [Lactobacillus casei W56]
Length = 151
Score = 95.9 bits (237), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 52/112 (46%), Positives = 69/112 (61%), Gaps = 4/112 (3%)
Query: 19 LANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISE 78
L ++ AR+NAY PYS VGAA+ D IF+G NVENASYG++ CAE++AI A+S
Sbjct: 26 LRTAALAARENAYVPYSHFAVGAAVRV-GDRIFSGANVENASYGLSNCAERSAIFAAVSA 84
Query: 79 GQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQ 130
G +K + V A D+ V+PCG+CRQVI+EF P I + V Q
Sbjct: 85 GYSKLDELLVIA---DTKGPVAPCGACRQVISEFFGPNAVITLANVAGQSVQ 133
>gi|442323232|ref|YP_007363253.1| cytidine deaminase [Myxococcus stipitatus DSM 14675]
gi|441490874|gb|AGC47569.1| cytidine deaminase [Myxococcus stipitatus DSM 14675]
Length = 134
Score = 95.9 bits (237), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 45/117 (38%), Positives = 75/117 (64%), Gaps = 3/117 (2%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
+ L + +I A+ PYS+ VGAA+L D ++ +GCNVENA+YG+T+CAE+ A++ +
Sbjct: 8 ERLFDEAIGVARRAHVPYSRFPVGAAVLYADGSVVSGCNVENATYGLTVCAERNALAAGV 67
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQVGL 133
++G+++ +AV A ++ V PCG CRQV+AEF+ P ++ K D ++ L
Sbjct: 68 AQGRSQPVAVAVVA---NTETPVPPCGMCRQVMAEFAGPNLPVRSRTPKGDVARYTL 121
>gi|337748358|ref|YP_004642520.1| hypothetical protein KNP414_04118 [Paenibacillus mucilaginosus
KNP414]
gi|379723274|ref|YP_005315405.1| hypothetical protein PM3016_5560 [Paenibacillus mucilaginosus 3016]
gi|386725997|ref|YP_006192323.1| hypothetical protein B2K_28320 [Paenibacillus mucilaginosus K02]
gi|336299547|gb|AEI42650.1| Cdd [Paenibacillus mucilaginosus KNP414]
gi|378571946|gb|AFC32256.1| Cdd [Paenibacillus mucilaginosus 3016]
gi|384093122|gb|AFH64558.1| hypothetical protein B2K_28320 [Paenibacillus mucilaginosus K02]
Length = 138
Score = 95.9 bits (237), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 52/120 (43%), Positives = 72/120 (60%), Gaps = 3/120 (2%)
Query: 12 LDPIEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTA 71
+DP Q L L+ +AR AY PYS +VGAALL + GCNVENA+YG T CAE+TA
Sbjct: 1 MDP--QELIRLAQEARLRAYTPYSGFKVGAALLDSSGHVHMGCNVENAAYGPTNCAERTA 58
Query: 72 ISKAISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQV 131
+ +AI++G + A A+ D+ +SPCG CRQV+ E +P + + +K D Q
Sbjct: 59 LHRAIADGVAP-RTFAAIAVTGDTAGPISPCGVCRQVLVELCAPDMPVYLSNLKGDVQQT 117
>gi|239626749|ref|ZP_04669780.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
gi|239516895|gb|EEQ56761.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
Length = 137
Score = 95.9 bits (237), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 50/113 (44%), Positives = 69/113 (61%), Gaps = 4/113 (3%)
Query: 16 EQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKA 75
+ L +I +Y PYS V AALLC D T+FTG N+ENASY ++CAE+ A KA
Sbjct: 3 RKKLIQAAIDGLPRSYAPYSHFHVSAALLCGDGTVFTGNNIENASYTPSVCAERCAFFKA 62
Query: 76 ISEGQTKFKRIAVSAILPDS--NKFVSPCGSCRQVIAEFSSPACDIQVLIVKS 126
+SEG+ F IA+ PD + +PCG CRQV+ EF +P+ ++L+ KS
Sbjct: 63 VSEGRRDFAAIAICG-GPDGVIKDYCTPCGVCRQVMREFCNPS-TFRILVAKS 113
>gi|381336038|ref|YP_005173813.1| cytidine deaminase [Leuconostoc mesenteroides subsp. mesenteroides
J18]
gi|356644004|gb|AET29847.1| cytidine deaminase [Leuconostoc mesenteroides subsp. mesenteroides
J18]
Length = 129
Score = 95.9 bits (237), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 45/115 (39%), Positives = 73/115 (63%), Gaps = 5/115 (4%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
+ L +++ QA ++ Y PYS VGAALL ++ IF G N+EN S+G+T CAE+TAI AI
Sbjct: 4 RELVDVANQALNDTYTPYSHFPVGAALLGENGEIFKGVNIENVSFGLTNCAERTAIFTAI 63
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQV 131
+ GQ F + +S +++ ++PCG+CRQV+ EF P D+ + ++ ++
Sbjct: 64 AAGQRHFHGLVISG---RTDEPIAPCGACRQVMVEFFDP--DMPIWLINDQGKEI 113
>gi|358063757|ref|ZP_09150360.1| cytidine deaminase [Clostridium hathewayi WAL-18680]
gi|356698035|gb|EHI59592.1| cytidine deaminase [Clostridium hathewayi WAL-18680]
Length = 136
Score = 95.9 bits (237), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 74/113 (65%), Gaps = 2/113 (1%)
Query: 16 EQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKA 75
++ L +I N+Y PYS V AALLC+D T++TG N+ENA+Y T+CAE++A +A
Sbjct: 3 DRQLIRTAIDNLPNSYVPYSHFHVSAALLCKDGTVYTGNNIENAAYSATVCAERSAFFRA 62
Query: 76 ISEGQTKFKRIAV-SAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSD 127
++EG+ +F+ I + + + + +PCG CRQV+ EF SP ++++ K++
Sbjct: 63 LNEGKREFEAIVICGGMNGEIADYCAPCGVCRQVMREFCSPE-TFRIILAKTE 114
>gi|116617561|ref|YP_817932.1| cytidine deaminase [Leuconostoc mesenteroides subsp. mesenteroides
ATCC 8293]
gi|116096408|gb|ABJ61559.1| cytidine deaminase [Leuconostoc mesenteroides subsp. mesenteroides
ATCC 8293]
Length = 129
Score = 95.9 bits (237), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 45/115 (39%), Positives = 73/115 (63%), Gaps = 5/115 (4%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
+ L +++ QA ++ Y PYS VGAALL ++ IF G N+EN S+G+T CAE+TAI AI
Sbjct: 4 RKLVDVANQALNDTYTPYSHFPVGAALLGENGEIFKGVNIENVSFGLTNCAERTAIFTAI 63
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQV 131
+ GQ F + +S +++ ++PCG+CRQV+ EF P D+ + ++ ++
Sbjct: 64 AAGQRHFHGLVISG---RTDEPIAPCGACRQVMVEFFDP--DMPIWLINDQGKEI 113
>gi|402302724|ref|ZP_10821831.1| cytidine deaminase [Selenomonas sp. FOBRC9]
gi|400380140|gb|EJP32966.1| cytidine deaminase [Selenomonas sp. FOBRC9]
Length = 136
Score = 95.9 bits (237), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 45/97 (46%), Positives = 65/97 (67%), Gaps = 3/97 (3%)
Query: 16 EQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKA 75
++ L + + R +AY PYS+ VGAALL + ++ G NVENASY + ICAE+ AI++A
Sbjct: 3 DRELVAAATRFRAHAYAPYSRFAVGAALLARSGRVYGGVNVENASYPVGICAERAAIARA 62
Query: 76 ISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEF 112
+++G+ F +AV A PD +PCG CRQV+AEF
Sbjct: 63 VTDGERAFDALAVVADTPD---VCAPCGMCRQVMAEF 96
>gi|428204038|ref|YP_007082627.1| cytidine deaminase [Pleurocapsa sp. PCC 7327]
gi|427981470|gb|AFY79070.1| cytidine deaminase, homotetrameric [Pleurocapsa sp. PCC 7327]
Length = 137
Score = 95.9 bits (237), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 49/103 (47%), Positives = 73/103 (70%), Gaps = 7/103 (6%)
Query: 30 AYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQTKFKRIAVS 89
AY PYSK +VGAA+L Q I+ G NVENASYG+T+CAE++A + AI+ G+ KF+ +A++
Sbjct: 23 AYAPYSKFRVGAAILGQRG-IYVGTNVENASYGLTLCAERSAFASAIARGERKFQAVAIA 81
Query: 90 AI---LPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRS 129
I P+ + ++PCG+CRQ IAE ++ A +++I DRS
Sbjct: 82 CIDAPNPEEIESITPCGACRQWIAELAATA---EIIICGCDRS 121
>gi|291526998|emb|CBK92584.1| cytidine deaminase [Eubacterium rectale M104/1]
Length = 139
Score = 95.9 bits (237), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 50/124 (40%), Positives = 73/124 (58%), Gaps = 3/124 (2%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
+ L + ++ D +Y PYS VGAALL ++ ++TGCN+ENA+Y T CAE+TA KA+
Sbjct: 7 EKLIDTALAQLDFSYAPYSGFNVGAALLAKNQAVYTGCNIENAAYTPTNCAERTAFFKAV 66
Query: 77 SEGQTKFKRIA-VSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQVGLIT 135
SEG F+ I V + + +PCG CRQV+ EF +P +L + DR + T
Sbjct: 67 SEGVRDFEAICIVGGKNQKATDYTAPCGVCRQVMMEFCNPKTFKIILAI--DRENYRIFT 124
Query: 136 IDGM 139
+D M
Sbjct: 125 LDDM 128
>gi|395323553|gb|EJF56020.1| cytidine deaminase [Dichomitus squalens LYAD-421 SS1]
Length = 157
Score = 95.5 bits (236), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 52/112 (46%), Positives = 68/112 (60%), Gaps = 5/112 (4%)
Query: 16 EQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKA 75
L +I+A++ AY YS +VGAALL I G N+ENASYG TICAE+TA KA
Sbjct: 13 RSRLIKATIEAKEFAYARYSNFRVGAALLTTTGDIIKGANIENASYGGTICAERTAFVKA 72
Query: 76 ISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSD 127
+SEG F +AV + D +SPCG CRQVI EF A + +L++ +D
Sbjct: 73 VSEGNRSFTALAV---VSDVASAISPCGMCRQVIREFC--AQSMPILLIPAD 119
>gi|125974091|ref|YP_001038001.1| cytidine deaminase [Clostridium thermocellum ATCC 27405]
gi|256004433|ref|ZP_05429413.1| cytidine deaminase [Clostridium thermocellum DSM 2360]
gi|281418236|ref|ZP_06249256.1| cytidine deaminase [Clostridium thermocellum JW20]
gi|385779656|ref|YP_005688821.1| cytidine deaminase [Clostridium thermocellum DSM 1313]
gi|419724207|ref|ZP_14251278.1| cytidine deaminase [Clostridium thermocellum AD2]
gi|419725826|ref|ZP_14252861.1| cytidine deaminase [Clostridium thermocellum YS]
gi|125714316|gb|ABN52808.1| cytidine deaminase [Clostridium thermocellum ATCC 27405]
gi|255991574|gb|EEU01676.1| cytidine deaminase [Clostridium thermocellum DSM 2360]
gi|281409638|gb|EFB39896.1| cytidine deaminase [Clostridium thermocellum JW20]
gi|316941336|gb|ADU75370.1| cytidine deaminase [Clostridium thermocellum DSM 1313]
gi|380770806|gb|EIC04691.1| cytidine deaminase [Clostridium thermocellum YS]
gi|380779796|gb|EIC09523.1| cytidine deaminase [Clostridium thermocellum AD2]
Length = 138
Score = 95.5 bits (236), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 51/122 (41%), Positives = 74/122 (60%), Gaps = 4/122 (3%)
Query: 18 NLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAIS 77
L + ++QAR +Y PYS VGAALL +D ++TGCN+ENA+Y + CAE+TA KA+S
Sbjct: 5 ELISHALQARKQSYSPYSHFAVGAALLSKDGRLYTGCNIENAAYTPSNCAERTAFFKAVS 64
Query: 78 EGQTKFKRIAV--SAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQVGLIT 135
EG +F IA+ D+ +PCG CRQV+ EF P +V++ K D + T
Sbjct: 65 EGVREFSAIAIVGGPEGADTLALCAPCGVCRQVMMEFCDPK-TFEVILAK-DPQHYEIFT 122
Query: 136 ID 137
++
Sbjct: 123 LE 124
>gi|157371870|ref|YP_001479859.1| cytidine deaminase [Serratia proteamaculans 568]
gi|157323634|gb|ABV42731.1| cytidine deaminase [Serratia proteamaculans 568]
Length = 142
Score = 95.5 bits (236), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 50/114 (43%), Positives = 67/114 (58%), Gaps = 7/114 (6%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
Q + + QAR+ +Y PYS VGAAL+ + +FTGCNVE+ SY T CAE+ AI KA+
Sbjct: 8 QEMIAAASQAREFSYAPYSNFTVGAALITKSGKVFTGCNVESVSYSPTTCAERVAILKAV 67
Query: 77 SEGQTKFKRIAV----SAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKS 126
SEG+ F+ I V + + PCG CRQ+I EF DIQ++I S
Sbjct: 68 SEGERSFEMIVVIGGPRVGESKAKGYSGPCGVCRQMIYEFGK---DIQIIIANS 118
>gi|289522365|ref|ZP_06439219.1| cytidine deaminase [Anaerobaculum hydrogeniformans ATCC BAA-1850]
gi|289504201|gb|EFD25365.1| cytidine deaminase [Anaerobaculum hydrogeniformans ATCC BAA-1850]
Length = 126
Score = 95.5 bits (236), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 45/98 (45%), Positives = 66/98 (67%), Gaps = 5/98 (5%)
Query: 15 IEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISK 74
I L +++ + R+NA+ PYS VGAALL Q I+ GCNVEN+SYG+TICAE+ A+
Sbjct: 3 IVSKLYDVAKRGRENAHAPYSGFSVGAALLAQSGRIYAGCNVENSSYGLTICAERVALCS 62
Query: 75 AISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEF 112
A+++G+ F+ + + A + V PCG+C QV+AEF
Sbjct: 63 AVAQGERVFEMMIICA-----DSIVPPCGACLQVMAEF 95
>gi|406963251|gb|EKD89370.1| Cytidine deaminase [uncultured bacterium]
Length = 134
Score = 95.5 bits (236), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 49/116 (42%), Positives = 74/116 (63%), Gaps = 9/116 (7%)
Query: 12 LDP-IEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKT 70
L P +++ L ++Q R+ AY PYSK +VGAALL I+ G N+ENA Y + +CAE+
Sbjct: 3 LSPELQKQLIETAVQVREWAYAPYSKYRVGAALLTTSGKIYDGVNIENAVYPLGLCAERV 62
Query: 71 AISKAISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKS 126
AI KA+SEG+ +F IA++ + PCGSCRQV+AE+ ++V++V +
Sbjct: 63 AIFKAVSEGEREFVAIAIA-----TENAGMPCGSCRQVMAEY---GLSMRVIVVDT 110
>gi|339627013|ref|YP_004718656.1| cdd cytidine deaminase [Sulfobacillus acidophilus TPY]
gi|379008603|ref|YP_005258054.1| cytidine deaminase [Sulfobacillus acidophilus DSM 10332]
gi|339284802|gb|AEJ38913.1| cdd cytidine deaminase [Sulfobacillus acidophilus TPY]
gi|361054865|gb|AEW06382.1| cytidine deaminase [Sulfobacillus acidophilus DSM 10332]
Length = 136
Score = 95.5 bits (236), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 54/119 (45%), Positives = 69/119 (57%), Gaps = 9/119 (7%)
Query: 25 QARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQTKFK 84
Q R AY PYS +VGAAL D TI TG NVENASY + CAE+ A+ A+ +G +F
Sbjct: 10 QVRQYAYAPYSGFRVGAALETDDGTIITGVNVENASYPLGCCAERAALYTAVGQGYRRFV 69
Query: 85 RIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQVGLITIDGMYLTL 143
RIAV + P S V PCG CRQ +AEF D+ V++ D + G I G++ L
Sbjct: 70 RIAV--VGPGSRP-VPPCGGCRQALAEFG----DLTVIMATPD--ETGPIETRGLHELL 119
>gi|313894943|ref|ZP_07828502.1| cytidine deaminase [Selenomonas sp. oral taxon 137 str. F0430]
gi|312976396|gb|EFR41852.1| cytidine deaminase [Selenomonas sp. oral taxon 137 str. F0430]
Length = 136
Score = 95.5 bits (236), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 44/97 (45%), Positives = 66/97 (68%), Gaps = 3/97 (3%)
Query: 16 EQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKA 75
++ L +++ R +AY PYS+ VGAALL + ++ G NVENASY + ICAE+ AI++A
Sbjct: 3 DRELVAAAMRFRAHAYAPYSRFAVGAALLARSGRVYGGVNVENASYPVGICAERAAIARA 62
Query: 76 ISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEF 112
+++G+ F +A+ A DS +PCG CRQV+AEF
Sbjct: 63 VTDGERDFDALAIVA---DSPDVCAPCGMCRQVMAEF 96
>gi|410456780|ref|ZP_11310636.1| cytidine deaminase [Bacillus bataviensis LMG 21833]
gi|409927537|gb|EKN64670.1| cytidine deaminase [Bacillus bataviensis LMG 21833]
Length = 133
Score = 95.5 bits (236), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 51/110 (46%), Positives = 71/110 (64%), Gaps = 6/110 (5%)
Query: 15 IEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISK 74
IEQ L + +ARD AY PYSK VGAALL D ++ GCN+ENA+Y M C E++A+
Sbjct: 3 IEQ-LIEEAKKARDKAYVPYSKFGVGAALLTTDGKVYHGCNIENAAYSMCNCGERSALFS 61
Query: 75 AISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIV 124
A S G F+ +AV A D+++ SPCG+CRQVI+E D++V++
Sbjct: 62 AYSHGDRNFQMLAVVA---DTDRPCSPCGACRQVISELCPK--DMKVILT 106
>gi|350566285|ref|ZP_08934970.1| cytidine deaminase [Peptoniphilus indolicus ATCC 29427]
gi|348662911|gb|EGY79539.1| cytidine deaminase [Peptoniphilus indolicus ATCC 29427]
Length = 134
Score = 95.5 bits (236), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 49/108 (45%), Positives = 72/108 (66%), Gaps = 8/108 (7%)
Query: 17 QNLANLSIQARDNA-YCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKA 75
+ L ++I+ARDN+ Y PYS +VGAA+ +D ++++G N+E +SY T CAE+TAI KA
Sbjct: 4 KKLIEMAIEARDNSSYTPYSNFKVGAAVEMEDGSVYSGGNIEISSYSPTNCAERTAIFKA 63
Query: 76 ISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLI 123
+SEG + K+IA+ + S PCG CRQVI EF D+Q++I
Sbjct: 64 VSEGHREIKKIAIVS----SGGETFPCGVCRQVIREFGK---DVQIII 104
>gi|414074517|ref|YP_006999734.1| Cytidine deaminase [Lactococcus lactis subsp. cremoris UC509.9]
gi|413974437|gb|AFW91901.1| Cytidine deaminase [Lactococcus lactis subsp. cremoris UC509.9]
Length = 130
Score = 95.5 bits (236), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 52/115 (45%), Positives = 74/115 (64%), Gaps = 6/115 (5%)
Query: 25 QARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQTKFK 84
+A AY PYS VGAA L D + GCN+ENAS+G++ CAE+TAI KAISEG F
Sbjct: 13 EASSLAYVPYSHFPVGAAFLTADGQVIKGCNIENASFGLSNCAERTAIFKAISEGVKDFD 72
Query: 85 RIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQVGLITIDGM 139
+ V ++ + +SPCG+CRQV+AEF PA D+ V ++ D +V +++G+
Sbjct: 73 ALYV---FGETEEPISPCGACRQVLAEF-CPA-DMPVYLISKD-DKVKETSVEGL 121
>gi|116494999|ref|YP_806733.1| cytidine deaminase [Lactobacillus casei ATCC 334]
gi|191638505|ref|YP_001987671.1| Cytidine deaminase [Lactobacillus casei BL23]
gi|239631407|ref|ZP_04674438.1| cytidine deaminase [Lactobacillus paracasei subsp. paracasei
8700:2]
gi|301066561|ref|YP_003788584.1| cytidine deaminase [Lactobacillus casei str. Zhang]
gi|385820213|ref|YP_005856600.1| Pyrimidine-nucleoside phosphorylase [Lactobacillus casei LC2W]
gi|385823410|ref|YP_005859752.1| Pyrimidine-nucleoside phosphorylase [Lactobacillus casei BD-II]
gi|417983531|ref|ZP_12624167.1| cytidine deaminase [Lactobacillus casei 21/1]
gi|417986873|ref|ZP_12627438.1| cytidine deaminase [Lactobacillus casei 32G]
gi|417989755|ref|ZP_12630256.1| cytidine deaminase [Lactobacillus casei A2-362]
gi|417993019|ref|ZP_12633370.1| cytidine deaminase [Lactobacillus casei CRF28]
gi|417996377|ref|ZP_12636657.1| cytidine deaminase [Lactobacillus casei M36]
gi|417999250|ref|ZP_12639461.1| cytidine deaminase [Lactobacillus casei T71499]
gi|418005223|ref|ZP_12645219.1| cytidine deaminase [Lactobacillus casei UW1]
gi|418008115|ref|ZP_12647984.1| cytidine deaminase [Lactobacillus casei UW4]
gi|418010954|ref|ZP_12650725.1| cytidine deaminase [Lactobacillus casei Lc-10]
gi|418015194|ref|ZP_12654771.1| cytidine deaminase [Lactobacillus casei Lpc-37]
gi|116105149|gb|ABJ70291.1| cytidine deaminase [Lactobacillus casei ATCC 334]
gi|190712807|emb|CAQ66813.1| Cytidine deaminase [Lactobacillus casei BL23]
gi|239525872|gb|EEQ64873.1| cytidine deaminase [Lactobacillus paracasei subsp. paracasei
8700:2]
gi|300438968|gb|ADK18734.1| Cytidine deaminase [Lactobacillus casei str. Zhang]
gi|327382540|gb|AEA54016.1| Pyrimidine-nucleoside phosphorylase [Lactobacillus casei LC2W]
gi|327385737|gb|AEA57211.1| Pyrimidine-nucleoside phosphorylase [Lactobacillus casei BD-II]
gi|410524607|gb|EKP99515.1| cytidine deaminase [Lactobacillus casei 32G]
gi|410527800|gb|EKQ02662.1| cytidine deaminase [Lactobacillus casei 21/1]
gi|410532428|gb|EKQ07136.1| cytidine deaminase [Lactobacillus casei CRF28]
gi|410535499|gb|EKQ10120.1| cytidine deaminase [Lactobacillus casei M36]
gi|410537500|gb|EKQ12074.1| cytidine deaminase [Lactobacillus casei A2-362]
gi|410539526|gb|EKQ14054.1| cytidine deaminase [Lactobacillus casei T71499]
gi|410547343|gb|EKQ21578.1| cytidine deaminase [Lactobacillus casei UW4]
gi|410547476|gb|EKQ21709.1| cytidine deaminase [Lactobacillus casei UW1]
gi|410552018|gb|EKQ26057.1| cytidine deaminase [Lactobacillus casei Lpc-37]
gi|410553533|gb|EKQ27536.1| cytidine deaminase [Lactobacillus casei Lc-10]
Length = 129
Score = 95.5 bits (236), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 51/112 (45%), Positives = 69/112 (61%), Gaps = 4/112 (3%)
Query: 19 LANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISE 78
L ++ AR+NAY PYS VGAA+ D IF+G NVENASYG++ CAE++AI A+S
Sbjct: 4 LRTAALAARENAYVPYSHFAVGAAVRV-GDRIFSGANVENASYGLSNCAERSAIFAAVSA 62
Query: 79 GQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQ 130
G +K + V + D+ V+PCG+CRQVI+EF P I + V Q
Sbjct: 63 GYSKLDELLV---IADTKGPVAPCGACRQVISEFFGPNAVITLANVAGQSVQ 111
>gi|395761003|ref|ZP_10441672.1| cytidine deaminase [Janthinobacterium lividum PAMC 25724]
Length = 135
Score = 95.5 bits (236), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 50/117 (42%), Positives = 73/117 (62%), Gaps = 5/117 (4%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
Q L + R+ AY PYS+ +VGAALLC+D +F GCNVENA+YG+ CAE+TA AI
Sbjct: 4 QELIAEANAGRELAYAPYSRFKVGAALLCKDGRVFRGCNVENAAYGLCNCAERTAFFSAI 63
Query: 77 SEG--QTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQV 131
+ G F ++AV+ D+ + +SPCG+CRQV+ E + + +K+D +V
Sbjct: 64 AHGCKPGDFAKLAVTG---DTAEPISPCGACRQVMFEMGGADLPVILTNLKNDIMEV 117
>gi|195433733|ref|XP_002064862.1| GK15159 [Drosophila willistoni]
gi|194160947|gb|EDW75848.1| GK15159 [Drosophila willistoni]
Length = 170
Score = 95.1 bits (235), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 53/122 (43%), Positives = 71/122 (58%), Gaps = 5/122 (4%)
Query: 3 GHDIMEFSALDPIEQNLANLSIQARDNAYCPYSKLQVGAALLC-QDDTIFTGCNVENASY 61
+++ F +LD Q L + R +AY PYS +VGAA + IFTGCNVENA++
Sbjct: 14 AEEVVTFGSLDASTQELLKAAFAVRQHAYVPYSGFKVGAAFRAIPSNQIFTGCNVENAAF 73
Query: 62 GMTICAEKTAISKAISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQV 121
CAE+TA++KA+SEG +F AV A D F PCG CRQ I EF++ DI +
Sbjct: 74 TPCSCAERTALTKAVSEGAREFSVGAVVAYQEDV--FTPPCGVCRQFIREFAT--VDIPI 129
Query: 122 LI 123
I
Sbjct: 130 YI 131
>gi|116512241|ref|YP_809457.1| cytidine deaminase [Lactococcus lactis subsp. cremoris SK11]
gi|125623894|ref|YP_001032377.1| Cdd protein [Lactococcus lactis subsp. cremoris MG1363]
gi|385838092|ref|YP_005875722.1| Cytidine deaminase [Lactococcus lactis subsp. cremoris A76]
gi|389854244|ref|YP_006356488.1| cytidine deaminase [Lactococcus lactis subsp. cremoris NZ9000]
gi|116107895|gb|ABJ73035.1| cytidine deaminase [Lactococcus lactis subsp. cremoris SK11]
gi|124492702|emb|CAL97656.1| Cdd protein [Lactococcus lactis subsp. cremoris MG1363]
gi|300070666|gb|ADJ60066.1| cytidine deaminase [Lactococcus lactis subsp. cremoris NZ9000]
gi|358749320|gb|AEU40299.1| Cytidine deaminase [Lactococcus lactis subsp. cremoris A76]
Length = 130
Score = 95.1 bits (235), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 52/115 (45%), Positives = 74/115 (64%), Gaps = 6/115 (5%)
Query: 25 QARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQTKFK 84
+A AY PYS VGAA L D + GCN+ENAS+G++ CAE+TAI KAISEG F
Sbjct: 13 EAASLAYVPYSHFPVGAAFLTADGQVIKGCNIENASFGLSNCAERTAIFKAISEGVKDFD 72
Query: 85 RIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQVGLITIDGM 139
+ V ++ + +SPCG+CRQV+AEF PA D+ V ++ D +V +++G+
Sbjct: 73 ALYV---FGETEEPISPCGACRQVLAEF-CPA-DMPVYLISKD-DKVKETSVEGL 121
>gi|116491696|ref|YP_811240.1| cytidine deaminase [Oenococcus oeni PSU-1]
gi|290891317|ref|ZP_06554378.1| hypothetical protein AWRIB429_1768 [Oenococcus oeni AWRIB429]
gi|419758471|ref|ZP_14284788.1| cytidine deaminase [Oenococcus oeni AWRIB304]
gi|419856679|ref|ZP_14379400.1| cytidine deaminase [Oenococcus oeni AWRIB202]
gi|421184863|ref|ZP_15642279.1| cytidine deaminase [Oenococcus oeni AWRIB318]
gi|421189018|ref|ZP_15646337.1| cytidine deaminase [Oenococcus oeni AWRIB422]
gi|421192021|ref|ZP_15649291.1| cytidine deaminase [Oenococcus oeni AWRIB548]
gi|421192872|ref|ZP_15650125.1| cytidine deaminase [Oenococcus oeni AWRIB553]
gi|421195187|ref|ZP_15652399.1| cytidine deaminase [Oenococcus oeni AWRIB568]
gi|421197056|ref|ZP_15654237.1| cytidine deaminase [Oenococcus oeni AWRIB576]
gi|116092421|gb|ABJ57575.1| cytidine deaminase [Oenococcus oeni PSU-1]
gi|290478963|gb|EFD87626.1| hypothetical protein AWRIB429_1768 [Oenococcus oeni AWRIB429]
gi|399905093|gb|EJN92544.1| cytidine deaminase [Oenococcus oeni AWRIB304]
gi|399966465|gb|EJO01014.1| cytidine deaminase [Oenococcus oeni AWRIB318]
gi|399970842|gb|EJO05133.1| cytidine deaminase [Oenococcus oeni AWRIB548]
gi|399973775|gb|EJO07939.1| cytidine deaminase [Oenococcus oeni AWRIB422]
gi|399974450|gb|EJO08613.1| cytidine deaminase [Oenococcus oeni AWRIB553]
gi|399976375|gb|EJO10401.1| cytidine deaminase [Oenococcus oeni AWRIB576]
gi|399976971|gb|EJO10984.1| cytidine deaminase [Oenococcus oeni AWRIB568]
gi|410499724|gb|EKP91155.1| cytidine deaminase [Oenococcus oeni AWRIB202]
Length = 132
Score = 95.1 bits (235), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 48/105 (45%), Positives = 66/105 (62%), Gaps = 10/105 (9%)
Query: 8 EFSALDPIEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICA 67
E+SAL + Q D AY PYS VGAALL DD IF GCN+ENA++G T+CA
Sbjct: 5 EYSALKKVAD-------QELDKAYIPYSHFAVGAALLSADDRIFPGCNIENAAFGSTMCA 57
Query: 68 EKTAISKAISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEF 112
E+TAI A++ G +FK + +S + ++PCG+CRQV+ E+
Sbjct: 58 ERTAIFSAVAAGCHQFKALVISG---RTEGAIAPCGACRQVMVEW 99
>gi|419858297|ref|ZP_14380971.1| cytidine deaminase [Oenococcus oeni DSM 20252 = AWRIB129]
gi|410498918|gb|EKP90361.1| cytidine deaminase [Oenococcus oeni DSM 20252 = AWRIB129]
Length = 132
Score = 95.1 bits (235), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 45/94 (47%), Positives = 63/94 (67%), Gaps = 3/94 (3%)
Query: 19 LANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISE 78
L ++ Q D AY PYS VGAALL DD IF GCN+ENA++G T+CAE+TAI A++
Sbjct: 9 LKRVADQELDKAYIPYSHFAVGAALLSADDRIFPGCNIENAAFGSTMCAERTAIFSAVAA 68
Query: 79 GQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEF 112
G +FK + +S + ++PCG+CRQV+ E+
Sbjct: 69 GCHQFKALVISG---RTEGAIAPCGACRQVMVEW 99
>gi|227432584|ref|ZP_03914564.1| cytidine deaminase [Leuconostoc mesenteroides subsp. cremoris ATCC
19254]
gi|227351667|gb|EEJ41913.1| cytidine deaminase [Leuconostoc mesenteroides subsp. cremoris ATCC
19254]
Length = 131
Score = 95.1 bits (235), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 45/115 (39%), Positives = 73/115 (63%), Gaps = 5/115 (4%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
+ L +++ QA ++ Y PYS VGAALL ++ IF G N+EN S+G+T CAE+TAI AI
Sbjct: 6 RELVDVANQALNDTYTPYSHFPVGAALLGENGEIFKGVNIENVSFGLTNCAERTAIFTAI 65
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQV 131
+ GQ F + +S +++ ++PCG+CRQV+ EF P D+ + ++ ++
Sbjct: 66 AAGQCHFHGLVISG---RTDEPIAPCGACRQVMVEFFDP--DMPIWLINDQGKEI 115
>gi|319653810|ref|ZP_08007905.1| cytidine deaminase [Bacillus sp. 2_A_57_CT2]
gi|317394536|gb|EFV75279.1| cytidine deaminase [Bacillus sp. 2_A_57_CT2]
Length = 132
Score = 95.1 bits (235), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 53/113 (46%), Positives = 68/113 (60%), Gaps = 7/113 (6%)
Query: 27 RDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQTK--FK 84
R+ AY PYSK VGAALL +D T+ G NVEN S+G T CAE+TAI AI+ G K F+
Sbjct: 14 RERAYAPYSKFPVGAALLLKDGTVINGVNVENVSFGATNCAERTAIFTAIANGYKKGDFQ 73
Query: 85 RIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQVGLITID 137
IAV+ D+ F+ PC CRQV+AEF P D+ V + + + L D
Sbjct: 74 AIAVAG---DTADFLPPCSICRQVLAEFCLP--DMPVYLTNEKKEILELTLKD 121
>gi|256618406|ref|ZP_05475252.1| cytidine deaminase [Enterococcus faecalis ATCC 4200]
gi|256597933|gb|EEU17109.1| cytidine deaminase [Enterococcus faecalis ATCC 4200]
Length = 135
Score = 95.1 bits (235), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 47/113 (41%), Positives = 73/113 (64%), Gaps = 5/113 (4%)
Query: 15 IEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISK 74
+++ + +++A +AY PYS VGA L+ D ++ G N+ENAS+G+T CAE+TAI K
Sbjct: 7 VKKEWLDCAVEALAHAYVPYSNFPVGACLVTTDGKMYQGVNIENASFGLTNCAERTAIFK 66
Query: 75 AISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSD 127
AISE + F+ + V+ ++ +SPCG+CRQV+AEF P + V +V D
Sbjct: 67 AISEDERTFQHLVVAG---NTEAPISPCGACRQVMAEFFDP--QMPVTLVGKD 114
>gi|317153549|ref|YP_004121597.1| cytidine deaminase [Desulfovibrio aespoeensis Aspo-2]
gi|316943800|gb|ADU62851.1| cytidine deaminase [Desulfovibrio aespoeensis Aspo-2]
Length = 142
Score = 95.1 bits (235), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 47/105 (44%), Positives = 68/105 (64%), Gaps = 7/105 (6%)
Query: 25 QARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQTKFK 84
+A NAY PYS+ VGAALL +D ++ GCNVENAS+G+T+CAE+ A+ A+S+G+ +
Sbjct: 18 EASRNAYAPYSEFPVGAALLAEDGEVYVGCNVENASFGLTVCAERCAVHAAVSDGRGRGD 77
Query: 85 RIAVSAILPDSNKFVSPCGSCRQVIAEFSSP------ACDIQVLI 123
A+ +P SPCG+CRQV++EF P ACD ++
Sbjct: 78 LSALLIYVPGETCH-SPCGACRQVLSEFLLPDTPVYSACDTGEIV 121
>gi|227534994|ref|ZP_03965043.1| cytidine deaminase [Lactobacillus paracasei subsp. paracasei ATCC
25302]
gi|227187385|gb|EEI67452.1| cytidine deaminase [Lactobacillus paracasei subsp. paracasei ATCC
25302]
Length = 126
Score = 95.1 bits (235), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 50/108 (46%), Positives = 68/108 (62%), Gaps = 4/108 (3%)
Query: 23 SIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQTK 82
++ AR+NAY PYS VGAA+ D IF+G NVENASYG++ CAE++AI A+S G +K
Sbjct: 5 ALAARENAYVPYSHFAVGAAVRV-GDRIFSGANVENASYGLSNCAERSAIFAAVSAGYSK 63
Query: 83 FKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQ 130
+ V + D+ V+PCG+CRQVI+EF P I + V Q
Sbjct: 64 LDELLV---IADTKGPVAPCGACRQVISEFFGPNAVITLANVAGQSVQ 108
>gi|302414620|ref|XP_003005142.1| cytidine deaminase [Verticillium albo-atrum VaMs.102]
gi|261356211|gb|EEY18639.1| cytidine deaminase [Verticillium albo-atrum VaMs.102]
Length = 163
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/111 (43%), Positives = 64/111 (57%), Gaps = 3/111 (2%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
Q L + S+ A+ AYCPYSK +VGA +L G NVENASYG+ CAE+ A +KA+
Sbjct: 30 QTLHDRSVAAKSTAYCPYSKFRVGATILSNAGQFTDGANVENASYGVGTCAERVAFAKAV 89
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSD 127
EG F + V+A D VSPCG+CRQ + EF + + +K D
Sbjct: 90 QEGIRGFSAVGVAA---DIEPTVSPCGACRQFLREFRTVETPRFIFNIKGD 137
>gi|307276369|ref|ZP_07557493.1| cytidine deaminase [Enterococcus faecalis TX2134]
gi|306506943|gb|EFM76089.1| cytidine deaminase [Enterococcus faecalis TX2134]
Length = 154
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/113 (41%), Positives = 73/113 (64%), Gaps = 5/113 (4%)
Query: 15 IEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISK 74
+++ + +++A +AY PYS VGA L+ D ++ G N+ENAS+G+T CAE+TAI K
Sbjct: 26 VKKEWLDCAVEALAHAYVPYSNFPVGACLVTTDGKMYQGVNIENASFGLTNCAERTAIFK 85
Query: 75 AISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSD 127
AISE + F+ + V+ ++ +SPCG+CRQV+AEF P + V +V D
Sbjct: 86 AISEDERTFQHLVVAG---NTEAPISPCGACRQVMAEFFDP--QMPVTLVGKD 133
>gi|389737264|ref|ZP_10190722.1| cytidine deaminase [Rhodanobacter sp. 115]
gi|388436500|gb|EIL93363.1| cytidine deaminase [Rhodanobacter sp. 115]
Length = 136
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/101 (48%), Positives = 66/101 (65%), Gaps = 1/101 (0%)
Query: 12 LDPIEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTA 71
++ + L + + QAR+ AY PYS VGAALL +D F GCNVENA+YG+ CAE+TA
Sbjct: 1 MNETAETLLHEARQARERAYAPYSHFLVGAALLTRDGRRFGGCNVENAAYGLCNCAERTA 60
Query: 72 ISKAISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEF 112
+ AI+ G K A A+ D+ + VSPCG+CRQV+AE
Sbjct: 61 LFSAIAAG-CKPGDFAALAVTADTPEPVSPCGACRQVLAEL 100
>gi|291550573|emb|CBL26835.1| cytidine deaminase [Ruminococcus torques L2-14]
Length = 139
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/116 (42%), Positives = 70/116 (60%), Gaps = 1/116 (0%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
+ L + +I+ +Y PYS +VGAALL + I+TGCN+ENASY T CAE+TA KA+
Sbjct: 7 EKLIDTAIKQLKFSYTPYSNFKVGAALLTKSGKIYTGCNIENASYTPTNCAERTAFFKAV 66
Query: 77 SEGQTKFKRI-AVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQV 131
SEG F+ I V ++ +PCG CRQV+ EF +P +L V +R ++
Sbjct: 67 SEGVRDFQAICIVGGKDGKLTEYTAPCGVCRQVMMEFCNPKTFQIILAVDKERYEI 122
>gi|383458148|ref|YP_005372137.1| cytidine deaminase [Corallococcus coralloides DSM 2259]
gi|380732288|gb|AFE08290.1| cytidine deaminase [Corallococcus coralloides DSM 2259]
Length = 134
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 45/117 (38%), Positives = 73/117 (62%), Gaps = 3/117 (2%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
+ L +++ R A+ PYSK VGAA+L D +I GCNVENA+YG+T+CAE+ A +
Sbjct: 8 ERLFEEALRVRQRAHVPYSKFPVGAAVLYADGSIVAGCNVENATYGLTVCAERNAFVAGV 67
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQVGL 133
++G+ K +AV+ ++ D+ + PCG CRQV+AEF+ P ++ + ++ L
Sbjct: 68 AQGRE--KPVAVAVVV-DTPEPCPPCGMCRQVMAEFAGPDLPVRSRTLNGQEARYPL 121
>gi|340369926|ref|XP_003383498.1| PREDICTED: cytidine deaminase-like [Amphimedon queenslandica]
Length = 142
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/112 (41%), Positives = 74/112 (66%), Gaps = 3/112 (2%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
++L +++AR A+CPYS QVGAAL + + TG N+ENA+Y ++ CAE+ AI+K +
Sbjct: 7 EDLVQAALEARSRAHCPYSNFQVGAALRTKSGKVVTGSNIENAAYPLSTCAERVAITKCV 66
Query: 77 S--EGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKS 126
S E + K +A++ ++F SPCG CRQ+IAEF + + QV++VK+
Sbjct: 67 SSLENKDDKKIVAIAVATKLDDQFPSPCGGCRQIIAEFGWDS-NCQVILVKA 117
>gi|330820846|ref|YP_004349708.1| cytidine deaminase [Burkholderia gladioli BSR3]
gi|327372841|gb|AEA64196.1| cytidine deaminase [Burkholderia gladioli BSR3]
Length = 129
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/116 (43%), Positives = 73/116 (62%), Gaps = 8/116 (6%)
Query: 26 ARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQT--KF 83
AR+ AY PYS +VGAAL +D +F GCNVEN SYG+ CAE+TA+ AI+ G F
Sbjct: 13 ARERAYAPYSNFKVGAALQTRDGKVFHGCNVENGSYGLCNCAERTALFAAIASGHRPGDF 72
Query: 84 KRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQVGLITIDGM 139
R+AV+ D++ ++PCG+CRQVI E D++V ++ + + Q + T D +
Sbjct: 73 VRLAVTG---DTDGPIAPCGACRQVIHELGG--ADLEV-VLSNLKGQTQVTTADAL 122
>gi|331085621|ref|ZP_08334705.1| cytidine deaminase [Lachnospiraceae bacterium 9_1_43BFAA]
gi|330407508|gb|EGG87010.1| cytidine deaminase [Lachnospiraceae bacterium 9_1_43BFAA]
Length = 137
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/102 (46%), Positives = 65/102 (63%), Gaps = 2/102 (1%)
Query: 16 EQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKA 75
E+ L + +AR+ AY PYS +VGAALL + ++ GCN+E+ASY T CAE+TA KA
Sbjct: 3 ERELIEHAYRAREYAYTPYSDFRVGAALLTKSGKLYYGCNIESASYTPTNCAERTAFFKA 62
Query: 76 ISEGQTKFKRIAV--SAILPDSNKFVSPCGSCRQVIAEFSSP 115
+SEG+ +F+ IA+ S +PCG CRQV+ EF P
Sbjct: 63 VSEGEREFEGIAIVGGKGTGRSGNVCAPCGVCRQVMQEFCRP 104
>gi|373457027|ref|ZP_09548794.1| cytidine deaminase [Caldithrix abyssi DSM 13497]
gi|371718691|gb|EHO40462.1| cytidine deaminase [Caldithrix abyssi DSM 13497]
Length = 129
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/114 (42%), Positives = 73/114 (64%), Gaps = 6/114 (5%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
+ L + +AR A YS QVGAALL +D I TG NVE++SYG+TICAE+ A++KA+
Sbjct: 2 EKLIKAAREARKFARARYSNFQVGAALLTRDGQIITGSNVESSSYGLTICAERVALTKAL 61
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQ 130
SEG +F+ IA+ A F PCG+CRQ++ ++ A DI++++ +Q
Sbjct: 62 SEGIDQFEAIAIVA---KDGSFTPPCGACRQLLYDY---APDIEIILSNGKDTQ 109
>gi|291545313|emb|CBL18421.1| cytidine deaminase [Ruminococcus sp. SR1/5]
Length = 142
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/116 (40%), Positives = 69/116 (59%), Gaps = 1/116 (0%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
+ + +L+I+ D +Y PYS VGA LL ++ T +TGCN+ENA+Y T CAE+TA KA+
Sbjct: 7 KEMIDLAIRQMDYSYAPYSHFHVGAVLLAKNGTYYTGCNIENAAYTPTNCAERTAFFKAV 66
Query: 77 SEGQTKFKRI-AVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQV 131
SEG F+ I V ++ +PCG CRQV+ EF P +L V ++ +
Sbjct: 67 SEGMRDFQAICIVGGKDGVPTEYAAPCGVCRQVMMEFCDPETFQIILAVSREKYDI 122
>gi|325660651|ref|ZP_08149282.1| cytidine deaminase [Lachnospiraceae bacterium 4_1_37FAA]
gi|325473060|gb|EGC76267.1| cytidine deaminase [Lachnospiraceae bacterium 4_1_37FAA]
Length = 137
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/102 (46%), Positives = 65/102 (63%), Gaps = 2/102 (1%)
Query: 16 EQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKA 75
E+ L + +AR+ AY PYS +VGAALL + ++ GCN+E+ASY T CAE+TA KA
Sbjct: 3 ERELIEHAYRAREYAYTPYSDFRVGAALLTKSGKLYYGCNIESASYTPTNCAERTAFFKA 62
Query: 76 ISEGQTKFKRIAV--SAILPDSNKFVSPCGSCRQVIAEFSSP 115
+SEG+ +F+ IA+ S +PCG CRQV+ EF P
Sbjct: 63 VSEGEREFEGIAIVGGKGTGRSGNVCAPCGVCRQVMQEFCRP 104
>gi|317054844|ref|YP_004103311.1| cytidine deaminase [Ruminococcus albus 7]
gi|315447113|gb|ADU20677.1| cytidine deaminase [Ruminococcus albus 7]
Length = 127
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/120 (45%), Positives = 74/120 (61%), Gaps = 9/120 (7%)
Query: 19 LANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISE 78
L L+ +A N+Y YS VGAALL +D +F GCN+EN+S+ +TICAE+TAI KA+SE
Sbjct: 6 LLQLACEAAQNSYSKYSGFSVGAALLTEDGRVFKGCNIENSSFSLTICAERTAIFKAVSE 65
Query: 79 GQTKFKRIA-VSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQVGLITID 137
G T FK IA V + + PCG+C QV++EF CD I+ ++ G T+D
Sbjct: 66 GCTSFKAIAIVGGAEGNFSHPCCPCGACLQVMSEF----CDEDFSIILTN----GEFTLD 117
>gi|258575469|ref|XP_002541916.1| cytidine deaminase [Uncinocarpus reesii 1704]
gi|237902182|gb|EEP76583.1| cytidine deaminase [Uncinocarpus reesii 1704]
Length = 142
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/92 (50%), Positives = 62/92 (67%), Gaps = 5/92 (5%)
Query: 31 YCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQTKFKRIAVSA 90
YCPYS +VGA+LL +D T F G NVENASY + ICAEK AI A++ G F+ +AV++
Sbjct: 26 YCPYSHFRVGASLLTEDGTYFIGANVENASYPVGICAEKNAIGTAVTAGHKSFRAVAVAS 85
Query: 91 -ILPDSNKFVSPCGSCRQVIAEFSSPACDIQV 121
I+P + SPCGSCRQ + +F P+ I +
Sbjct: 86 DIIPGT----SPCGSCRQFMRQFCPPSLPIYM 113
>gi|317122070|ref|YP_004102073.1| pyrimidine-nucleoside phosphorylase [Thermaerobacter marianensis
DSM 12885]
gi|315592050|gb|ADU51346.1| pyrimidine-nucleoside phosphorylase [Thermaerobacter marianensis
DSM 12885]
Length = 622
Score = 94.7 bits (234), Expect = 1e-17, Method: Composition-based stats.
Identities = 43/97 (44%), Positives = 68/97 (70%), Gaps = 3/97 (3%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
+ L L+ AR++A P+S+ +VGAAL I+TG N+ENAS+G+T+CAE+ A+ KA+
Sbjct: 501 ETLHRLARAARESAVAPFSRYRVGAALETAGGRIYTGGNIENASFGLTMCAERVALFKAL 560
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFS 113
SEG+ +F RI ++A P+ PCG+CRQ++ E++
Sbjct: 561 SEGERRFTRIVITADGPEP---AFPCGACRQLLFEYA 594
>gi|336426384|ref|ZP_08606394.1| cytidine deaminase [Lachnospiraceae bacterium 3_1_57FAA_CT1]
gi|336010819|gb|EGN40799.1| cytidine deaminase [Lachnospiraceae bacterium 3_1_57FAA_CT1]
Length = 141
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/121 (44%), Positives = 71/121 (58%), Gaps = 6/121 (4%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDT-----IFTGCNVENASYGMTICAEKTA 71
+NL + +++AR+NAY PYS VGAALL + IFTGCNVENA++ T CAE+TA
Sbjct: 5 RNLISEAMKARENAYAPYSGFYVGAALLAAFEKDGKPLIFTGCNVENAAFTPTNCAERTA 64
Query: 72 ISKAISEGQTKFKRIA-VSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQ 130
K ISEG F+ IA V + +PCG CRQV+ EF +P + V D +
Sbjct: 65 FFKGISEGVRAFRAIAIVGGKQGAVTDYTAPCGVCRQVMMEFCNPDTFEVIAAVSEDDYK 124
Query: 131 V 131
V
Sbjct: 125 V 125
>gi|313888898|ref|ZP_07822558.1| cytidine deaminase [Peptoniphilus harei ACS-146-V-Sch2b]
gi|312845071|gb|EFR32472.1| cytidine deaminase [Peptoniphilus harei ACS-146-V-Sch2b]
Length = 137
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/98 (52%), Positives = 67/98 (68%), Gaps = 5/98 (5%)
Query: 17 QNLANLSIQARDN-AYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKA 75
+ L L+I ARDN Y PYS VG A+ +D +++TG N+E ASY T CAE+TAI KA
Sbjct: 4 KKLIELAIDARDNMTYTPYSHFNVGCAVEMEDGSVYTGGNIEIASYSPTNCAERTAIFKA 63
Query: 76 ISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFS 113
+SEG+ + K+IAV + DS+ + PCG CRQVI EFS
Sbjct: 64 VSEGKREIKKIAV---VGDSD-YTFPCGVCRQVIREFS 97
>gi|347521763|ref|YP_004779334.1| cytidine deaminase [Lactococcus garvieae ATCC 49156]
gi|385833146|ref|YP_005870921.1| cytidine deaminase [Lactococcus garvieae Lg2]
gi|420144031|ref|ZP_14651519.1| Cytidine deaminase [Lactococcus garvieae IPLA 31405]
gi|343180331|dbj|BAK58670.1| cytidine deaminase [Lactococcus garvieae ATCC 49156]
gi|343182299|dbj|BAK60637.1| cytidine deaminase [Lactococcus garvieae Lg2]
gi|391855483|gb|EIT66032.1| Cytidine deaminase [Lactococcus garvieae IPLA 31405]
Length = 130
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 44/99 (44%), Positives = 65/99 (65%), Gaps = 3/99 (3%)
Query: 14 PIEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAIS 73
P + L + +A +AY PYS VGAAL+ D ++ GCN+ENAS+G++ CAE+TAI
Sbjct: 2 PATKELIEAAREASSHAYVPYSNFPVGAALVTTDGKVYQGCNIENASFGLSNCAERTAIF 61
Query: 74 KAISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEF 112
KA+SE +F + I ++ +SPCG+CRQV++EF
Sbjct: 62 KAVSEDHLEFSSL---YIYGETAAPISPCGACRQVVSEF 97
>gi|253745915|gb|EET01519.1| Cytidine deaminase [Giardia intestinalis ATCC 50581]
Length = 134
Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/109 (44%), Positives = 69/109 (63%), Gaps = 8/109 (7%)
Query: 19 LANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISE 78
L +I+A + AY PYSK +VGAA+L + IF GCNVENASY + +CAE+TA+ KA+SE
Sbjct: 11 LVKAAIEASEYAYIPYSKYKVGAAILTESGEIFKGCNVENASYPIGVCAERTAVVKAVSE 70
Query: 79 GQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSD 127
G+ IA + + D SPCG CRQ + EF+ + +++ K D
Sbjct: 71 GKKNM--IACAVVTRDGG---SPCGMCRQTLNEFNP---KMHIILAKLD 111
>gi|440473528|gb|ELQ42318.1| hypothetical protein OOU_Y34scaffold00215g2 [Magnaporthe oryzae
Y34]
gi|440483641|gb|ELQ63991.1| hypothetical protein OOW_P131scaffold00889g1 [Magnaporthe oryzae
P131]
Length = 536
Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/114 (45%), Positives = 67/114 (58%), Gaps = 9/114 (7%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDD--TIFTGCNVENASYGMTICAEKTAISK 74
Q L S A+ AYCPYS +VGA LL DD + +G NVENASY + CAE+ A+ K
Sbjct: 398 QQLQRRSEAAKSTAYCPYSNFRVGATLLSIDDKNSYISGANVENASYPVGTCAERVALGK 457
Query: 75 AISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDR 128
A++EG +F+ +AVS D SPCG CRQ I EFS D+ + I D+
Sbjct: 458 AVTEGHRRFRALAVST---DITPPASPCGMCRQFIREFS----DLHMPIFMFDK 504
>gi|168335271|ref|ZP_02693372.1| cytidine deaminase [Epulopiscium sp. 'N.t. morphotype B']
Length = 128
Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 45/88 (51%), Positives = 61/88 (69%), Gaps = 3/88 (3%)
Query: 25 QARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQTKFK 84
+A+ +Y YS VGAAL+ T++ G NVE ASYG+T CAE+TA KAI+EG+ KF
Sbjct: 12 KAKKFSYANYSNFHVGAALIGASGTVYLGANVEGASYGVTTCAERTAFYKAITEGERKFT 71
Query: 85 RIAVSAILPDSNKFVSPCGSCRQVIAEF 112
I AI+ DS+K + PCG CRQV+++F
Sbjct: 72 TI---AIISDSDKIIYPCGICRQVMSDF 96
>gi|114770336|ref|ZP_01447874.1| cytidine deaminase [Rhodobacterales bacterium HTCC2255]
gi|114549173|gb|EAU52056.1| cytidine deaminase [alpha proteobacterium HTCC2255]
Length = 131
Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 45/84 (53%), Positives = 61/84 (72%), Gaps = 3/84 (3%)
Query: 29 NAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQTKFKRIAV 88
NA+ PYS VGA++L +D +I GCNVENAS+G TICAE+TAIS I++G+T + I V
Sbjct: 20 NAHVPYSSFHVGASILYEDGSIEVGCNVENASFGATICAERTAISSGIAKGKTAIEAICV 79
Query: 89 SAILPDSNKFVSPCGSCRQVIAEF 112
+ + ++ V+PCG CRQVI EF
Sbjct: 80 TNL---TDTMVTPCGICRQVIWEF 100
>gi|357008309|ref|ZP_09073308.1| Cdd [Paenibacillus elgii B69]
Length = 138
Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/116 (42%), Positives = 72/116 (62%), Gaps = 1/116 (0%)
Query: 16 EQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKA 75
+ L L+ AR+ AY PYS +VG+ALL + GCNVENA+YG T CAE+TA+ +A
Sbjct: 3 KTELIALAKTAREQAYTPYSHFKVGSALLDSKGRVHLGCNVENAAYGPTNCAERTALFRA 62
Query: 76 ISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQV 131
I++G+ + K AI+ D+ + +SPCG CRQV+ E P + + +K D S+
Sbjct: 63 IADGE-QAKSFRAMAIIGDTIQPISPCGVCRQVLVELCPPDMPVYLANLKGDISET 117
>gi|404482483|ref|ZP_11017710.1| cytidine deaminase [Clostridiales bacterium OBRC5-5]
gi|404344644|gb|EJZ71001.1| cytidine deaminase [Clostridiales bacterium OBRC5-5]
Length = 136
Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/115 (45%), Positives = 71/115 (61%), Gaps = 5/115 (4%)
Query: 25 QARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQTKFK 84
+AR AY PYSK +VGAAL+ + I GCN+ENA+Y CAE+TA KA+SEG F
Sbjct: 12 KARKMAYVPYSKYKVGAALMTKSGKIIHGCNIENAAYTPCNCAERTAFFKAVSEGIYDFC 71
Query: 85 RIAVSAILPDS--NKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQVGLITID 137
+IAV DS + +PCG CRQV+ EF +P + IV SD ++V + ++
Sbjct: 72 KIAVVGGFEDSDADALCTPCGVCRQVMQEFCNPK---EFEIVMSDGAKVKTMKLE 123
>gi|358374239|dbj|GAA90832.1| cytidine deaminase [Aspergillus kawachii IFO 4308]
Length = 142
Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/103 (45%), Positives = 62/103 (60%), Gaps = 3/103 (2%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
+ L+ +I A+D AYCPYSK +VGA +L + G NVENASY + CAE+ A AI
Sbjct: 14 ETLSTKAIAAKDTAYCPYSKFRVGACILTESGEFVQGANVENASYPVGTCAERVAFGNAI 73
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDI 119
G FK IAV++ D SPCG CRQ ++EF++P I
Sbjct: 74 VAGHRNFKAIAVAS---DIKPPASPCGMCRQFMSEFTTPEFPI 113
>gi|374308715|ref|YP_005055146.1| cytidine deaminase [Filifactor alocis ATCC 35896]
gi|291167046|gb|EFE29092.1| cytidine deaminase [Filifactor alocis ATCC 35896]
Length = 137
Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/112 (45%), Positives = 70/112 (62%), Gaps = 2/112 (1%)
Query: 25 QARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQTKFK 84
+AR+ +Y PYS QVGAALL + ++ GCN+ENASY T CAE+TA KAI +G+ +F
Sbjct: 12 KARECSYSPYSNFQVGAALLTKGGKVYLGCNIENASYTPTNCAERTAFFKAICDGEREFT 71
Query: 85 RIAV--SAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQVGLI 134
+IAV D+ + +PCG CRQV+ EF +P VL +D Q L+
Sbjct: 72 KIAVVGGKKGEDAKQICTPCGVCRQVMMEFCNPETFQIVLSDGNDGCQSYLL 123
>gi|339480723|ref|ZP_08656382.1| cytidine deaminase [Leuconostoc pseudomesenteroides KCTC 3652]
Length = 130
Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 44/117 (37%), Positives = 72/117 (61%), Gaps = 5/117 (4%)
Query: 15 IEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISK 74
+ LA+++ A ++ Y PYS VGAALL ++ IF G N+EN S+G+T CAE+TAI
Sbjct: 3 VPSTLADVANAALNDTYTPYSHFPVGAALLGENGEIFKGVNIENVSFGLTNCAERTAIFT 62
Query: 75 AISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQV 131
AI+ G F + +S +++ ++PCG+CRQV+ EF P D+ + ++ ++
Sbjct: 63 AIAAGHRHFHGLVISG---KTDEPIAPCGACRQVMVEFFEP--DMPIWLINDQGQEI 114
>gi|392395106|ref|YP_006431708.1| cytidine deaminase [Desulfitobacterium dehalogenans ATCC 51507]
gi|390526184|gb|AFM01915.1| cytidine deaminase [Desulfitobacterium dehalogenans ATCC 51507]
Length = 139
Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 45/97 (46%), Positives = 62/97 (63%), Gaps = 3/97 (3%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
+ L + +A NAY PYS VGAA L + I GCNVENASYG+TICAE+ ++ A
Sbjct: 13 EELIRRAQEAYKNAYVPYSHYPVGAATLWESGRIIAGCNVENASYGLTICAERNSVFHAA 72
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFS 113
G+ + + +AV+ ++ F SPCG+CRQV+ EFS
Sbjct: 73 YHGERRLRAVAVAV---PTDVFPSPCGACRQVLREFS 106
>gi|160947546|ref|ZP_02094713.1| hypothetical protein PEPMIC_01481 [Parvimonas micra ATCC 33270]
gi|158446680|gb|EDP23675.1| cytidine deaminase [Parvimonas micra ATCC 33270]
Length = 131
Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 45/108 (41%), Positives = 67/108 (62%), Gaps = 3/108 (2%)
Query: 15 IEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISK 74
I + + +++++ AY PYS VGA++L I+ GCN+ENASY T+CAE+ AI K
Sbjct: 3 IYKKMIKCALESQKKAYTPYSNFNVGASVLTDSGKIYGGCNIENASYTPTVCAERVAIFK 62
Query: 75 AISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVL 122
AI +G+ K +IAV + N PCG CRQV+ EF + C+I ++
Sbjct: 63 AIYDGEKKITKIAV---VGKENSLTYPCGVCRQVMKEFCTDDCEIIII 107
>gi|213965736|ref|ZP_03393929.1| cytidine deaminase [Corynebacterium amycolatum SK46]
gi|213951687|gb|EEB63076.1| cytidine deaminase [Corynebacterium amycolatum SK46]
Length = 139
Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/117 (44%), Positives = 71/117 (60%), Gaps = 6/117 (5%)
Query: 16 EQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKA 75
++ L + A +N+Y PYS VGAALL D T+ TGCNVENASYG+T CAE+TA+ +
Sbjct: 6 DEELLAKAYAATENSYVPYSGFPVGAALLLDDGTVVTGCNVENASYGLTNCAERTAVFRM 65
Query: 76 ISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQVG 132
++E K IA AI+ PCG+CRQV+ EF + +IV+S+R G
Sbjct: 66 VAEHGGNHK-IAACAIVGRKAAPCHPCGACRQVLHEFG-----CKRVIVESERPTDG 116
>gi|427406385|ref|ZP_18896590.1| cytidine deaminase [Selenomonas sp. F0473]
gi|425709226|gb|EKU72265.1| cytidine deaminase [Selenomonas sp. F0473]
Length = 135
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/97 (46%), Positives = 65/97 (67%), Gaps = 3/97 (3%)
Query: 16 EQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKA 75
++ L +++ R+NAY PYS VGAALL + ++ G NVENASY + ICAE+ AI++A
Sbjct: 3 DRELVAQALRFRENAYAPYSHFAVGAALLGRSGRVYGGVNVENASYPVGICAERAAIARA 62
Query: 76 ISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEF 112
+++G+ F+ +AV A DS PCG CRQ+IAE
Sbjct: 63 VADGERDFEALAVVA---DSPGVCVPCGMCRQMIAEL 96
>gi|383762274|ref|YP_005441256.1| cytidine deaminase [Caldilinea aerophila DSM 14535 = NBRC 104270]
gi|381382542|dbj|BAL99358.1| cytidine deaminase [Caldilinea aerophila DSM 14535 = NBRC 104270]
Length = 129
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/101 (45%), Positives = 65/101 (64%), Gaps = 7/101 (6%)
Query: 12 LDPIEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTA 71
+ P E L +++AR AY PYS VGAA+L +D +F GCNVENA+Y TICAE+ A
Sbjct: 1 MSPTE--LIEAAMEARRRAYAPYSHYTVGAAVLTEDGEVFLGCNVENAAYPATICAERVA 58
Query: 72 ISKAISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEF 112
++ A+++G+ +F IAV + SPCG+CRQV+ E
Sbjct: 59 LTAAVAQGKRRFTAIAVV-----TRNGGSPCGACRQVMIEL 94
>gi|205374161|ref|ZP_03226961.1| cytidine deaminase [Bacillus coahuilensis m4-4]
Length = 132
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/89 (51%), Positives = 60/89 (67%), Gaps = 3/89 (3%)
Query: 26 ARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQTKFKR 85
AR+ AY PYSK +VGAAL + ++ GCN+ENA+Y M CAE+TA+ KA SEG F
Sbjct: 13 AREKAYVPYSKFKVGAALFGTNGQVYHGCNIENAAYSMCNCAERTALFKAYSEGVKDFTT 72
Query: 86 IAVSAILPDSNKFVSPCGSCRQVIAEFSS 114
+ V A D+ + V PCG+CRQVI+E S
Sbjct: 73 MVVVA---DTKRPVPPCGACRQVISELCS 98
>gi|348025264|ref|YP_004765068.1| cytidine deaminase [Megasphaera elsdenii DSM 20460]
gi|341821317|emb|CCC72241.1| cytidine deaminase [Megasphaera elsdenii DSM 20460]
Length = 128
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 79/124 (63%), Gaps = 8/124 (6%)
Query: 16 EQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKA 75
++ L ++ Q R ++Y PYS VGAA+L ++ GCN+EN+SY + CAE+TAI KA
Sbjct: 3 DEALIEIAKQYRAHSYSPYSHFPVGAAVLTASGKVYGGCNIENSSYPLGNCAERTAIFKA 62
Query: 76 ISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQVGLIT 135
+SEG+ + +A AI+ D+ SPCG+CRQV+AEF P +I+ + + + ++T
Sbjct: 63 VSEGE---RDLAAIAIVADTPGPCSPCGACRQVMAEFHIPK-----VIMANLKGEWCVVT 114
Query: 136 IDGM 139
+D +
Sbjct: 115 LDQL 118
>gi|319935427|ref|ZP_08009864.1| cytidine deaminase [Coprobacillus sp. 29_1]
gi|319809643|gb|EFW06056.1| cytidine deaminase [Coprobacillus sp. 29_1]
Length = 131
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/99 (47%), Positives = 64/99 (64%), Gaps = 1/99 (1%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
Q L + + A +NAY PYS +VGA+LL D TI G N+ENA+YG T+CAE+ A+ +A
Sbjct: 4 QKLVDEAFIASENAYAPYSSFKVGASLLLTDGTIIHGTNIENAAYGSTMCAERNAVFQAY 63
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSP 115
+G K I AI+ D + +SPCG+CRQV+AE P
Sbjct: 64 CQGYRK-SDIEALAIVGDCSPLISPCGACRQVLAELLDP 101
>gi|242798464|ref|XP_002483175.1| mitochondrial ornithine carrier protein AmcA/Ort1, putative
[Talaromyces stipitatus ATCC 10500]
gi|218716520|gb|EED15941.1| mitochondrial ornithine carrier protein AmcA/Ort1, putative
[Talaromyces stipitatus ATCC 10500]
Length = 494
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/103 (43%), Positives = 62/103 (60%), Gaps = 3/103 (2%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
Q ++ +IQA++ AYCPYSK +VGA ++ G N+ENASY + ICAE+ A A+
Sbjct: 367 QTISQKAIQAKEKAYCPYSKFRVGACIITTTGEYIFGANIENASYPVGICAERVAFGNAL 426
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDI 119
+G FK IAV+ D SPCG CRQ + EF+ P+ I
Sbjct: 427 MQGHKSFKAIAVAT---DIKPGASPCGMCRQFMREFTPPSFPI 466
>gi|451821488|ref|YP_007457689.1| cytidine deaminase Cdd [Clostridium saccharoperbutylacetonicum
N1-4(HMT)]
gi|451787467|gb|AGF58435.1| cytidine deaminase Cdd [Clostridium saccharoperbutylacetonicum
N1-4(HMT)]
Length = 133
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/96 (46%), Positives = 62/96 (64%), Gaps = 1/96 (1%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
Q++ + + +A +NAY PYSK VG+ +L +D F G N+ENASYG+T CAE+ AI +A
Sbjct: 5 QDILDKAFEAMENAYAPYSKYHVGSCVLTKDKKYFIGANIENASYGLTNCAERNAIFQAY 64
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEF 112
S G K I AI+ D +PCG+CRQV+AE
Sbjct: 65 SNGYRK-SDIEAIAIVSDGKTLATPCGACRQVLAEL 99
>gi|448529709|ref|ZP_21620657.1| cytidine deaminase [Halorubrum hochstenium ATCC 700873]
gi|445708226|gb|ELZ60067.1| cytidine deaminase [Halorubrum hochstenium ATCC 700873]
Length = 142
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 44/92 (47%), Positives = 66/92 (71%), Gaps = 7/92 (7%)
Query: 31 YCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQTKFKRIAVSA 90
+ PYS+ +VGAAL D T++TGCN+ENA+Y ++ AE+ A+++A+ EG +F+RIAVS+
Sbjct: 16 HVPYSEYRVGAALRTADGTVYTGCNIENANYSNSLHAEEVALAEAVKEGHREFERIAVSS 75
Query: 91 ILPDSNKFVSPCGSCRQVIAEFSSP----ACD 118
+ D V+PCG CRQ +AEF++ ACD
Sbjct: 76 GVRDG---VTPCGMCRQTLAEFAADDLVVACD 104
>gi|145235827|ref|XP_001390562.1| cytidine deaminase [Aspergillus niger CBS 513.88]
gi|134058251|emb|CAK38443.1| unnamed protein product [Aspergillus niger]
Length = 142
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/103 (45%), Positives = 61/103 (59%), Gaps = 3/103 (2%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
+ L+ +I A+D AYCPYSK +VGA +L + G NVENASY + CAE+ A AI
Sbjct: 14 ETLSTKAIAAKDTAYCPYSKFRVGACILTESGEFVQGANVENASYPVGTCAERVAFGSAI 73
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDI 119
G FK IAV+ D SPCG CRQ ++EF++P I
Sbjct: 74 VAGHRNFKAIAVAT---DIKPPASPCGMCRQFMSEFTTPEFPI 113
>gi|302385492|ref|YP_003821314.1| cytidine deaminase [Clostridium saccharolyticum WM1]
gi|302196120|gb|ADL03691.1| cytidine deaminase [Clostridium saccharolyticum WM1]
Length = 144
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/122 (41%), Positives = 75/122 (61%), Gaps = 3/122 (2%)
Query: 12 LDPIEQN-LANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKT 70
LD + +N L + +A+ AY PYS VGAALL ++ ++ GCN+ENASY T C E+T
Sbjct: 3 LDEMIKNMLVAEAYEAQKMAYVPYSDFCVGAALLAKNGKVYRGCNIENASYTPTNCGERT 62
Query: 71 AISKAISEGQTKFKRIA-VSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRS 129
A KA+SEG T+F IA V + + +PCG CRQV+AEF P + ++++ + +
Sbjct: 63 AFFKAVSEGVTEFDAIAIVGNKRGEKGELCAPCGVCRQVMAEFCDPE-EFKIILAAGEET 121
Query: 130 QV 131
V
Sbjct: 122 SV 123
>gi|126464981|ref|YP_001040090.1| cytidine deaminase [Staphylothermus marinus F1]
gi|126013804|gb|ABN69182.1| cytidine deaminase [Staphylothermus marinus F1]
Length = 134
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/85 (52%), Positives = 65/85 (76%), Gaps = 3/85 (3%)
Query: 29 NAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQTKFKRIAV 88
N+Y PYS + V AA+L +++++F G NVENASYG+TICAE++AIS ++ G+ + IAV
Sbjct: 20 NSYAPYSGVHVAAAVLTRNNSVFLGVNVENASYGLTICAERSAISAMVTAGER--EPIAV 77
Query: 89 SAILPDSNKFVSPCGSCRQVIAEFS 113
AI+ D + + PCG+CRQVIAEF+
Sbjct: 78 -AIVTDLDNPIPPCGACRQVIAEFN 101
>gi|421187860|ref|ZP_15645202.1| cytidine deaminase [Oenococcus oeni AWRIB419]
gi|399966720|gb|EJO01232.1| cytidine deaminase [Oenococcus oeni AWRIB419]
Length = 132
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/105 (44%), Positives = 66/105 (62%), Gaps = 10/105 (9%)
Query: 8 EFSALDPIEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICA 67
E+SAL + Q D AY PYS VGAA+L DD IF GCN+ENA++G T+CA
Sbjct: 5 EYSALKKVAD-------QELDKAYIPYSHFAVGAAILSADDRIFPGCNIENAAFGSTMCA 57
Query: 68 EKTAISKAISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEF 112
E+TAI A++ G +FK + +S + ++PCG+CRQV+ E+
Sbjct: 58 ERTAIFSAVAAGCHQFKALVISG---RTEGAIAPCGACRQVMVEW 99
>gi|307244317|ref|ZP_07526431.1| cytidine deaminase [Peptostreptococcus stomatis DSM 17678]
gi|306492283|gb|EFM64322.1| cytidine deaminase [Peptostreptococcus stomatis DSM 17678]
Length = 153
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/108 (43%), Positives = 65/108 (60%), Gaps = 1/108 (0%)
Query: 12 LDPIEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTA 71
+D +Q+L N + A N+Y PYS +VGA + + + F G N+ENAS G+T CAE+ A
Sbjct: 22 IDKRDQSLINRAFNALKNSYSPYSNFRVGACVETKTNEYFIGTNIENASLGLTNCAERNA 81
Query: 72 ISKAISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDI 119
I A S G K K I AI+ + K +PCG+CRQV++E P C I
Sbjct: 82 IFSAYSHGYRK-KDIRAIAIVSEDKKLTTPCGACRQVLSELLEPTCPI 128
>gi|78059780|ref|YP_366355.1| cytidine deaminase [Burkholderia sp. 383]
gi|77964330|gb|ABB05711.1| cytidine deaminase [Burkholderia sp. 383]
Length = 129
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/93 (52%), Positives = 66/93 (70%), Gaps = 7/93 (7%)
Query: 33 PYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQT--KFKRIAVSA 90
PYS+ +VGAAL +D TIF GCNVENASYG+ CAE+TAI AI+ G F R+AV
Sbjct: 20 PYSRFKVGAALQARDGTIFHGCNVENASYGLCNCAERTAIFSAIAAGYRPGDFTRLAV-- 77
Query: 91 ILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLI 123
+ D++ ++PCG+CRQVI E +P DI+V++
Sbjct: 78 -VGDTDGPIAPCGACRQVIIEIGTP--DIEVIL 107
>gi|409386109|ref|ZP_11238578.1| Cytidine deaminase [Lactococcus raffinolactis 4877]
gi|399206590|emb|CCK19493.1| Cytidine deaminase [Lactococcus raffinolactis 4877]
Length = 130
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/91 (50%), Positives = 64/91 (70%), Gaps = 6/91 (6%)
Query: 25 QARDN---AYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQT 81
QAR+ AY PYS VGAAL+ ++ +F GCN+ENAS+G+T CAE+TAI KA+S G
Sbjct: 10 QAREASSVAYVPYSNFPVGAALVAKNGLVFQGCNIENASFGLTNCAERTAIFKAVSSGVR 69
Query: 82 KFKRIAVSAILPDSNKFVSPCGSCRQVIAEF 112
+F+ I I ++ + +SPCG+CRQV+ EF
Sbjct: 70 EFEMI---GIYGETEEPISPCGACRQVLTEF 97
>gi|431794886|ref|YP_007221791.1| cytidine deaminase [Desulfitobacterium dichloroeliminans LMG
P-21439]
gi|430785112|gb|AGA70395.1| cytidine deaminase [Desulfitobacterium dichloroeliminans LMG
P-21439]
Length = 139
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 44/97 (45%), Positives = 64/97 (65%), Gaps = 3/97 (3%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
+ L + + +A NAY PYS VGAA L + I +GCNVENAS+G+T+CAE+ A+ A
Sbjct: 13 ETLIHEAQEAYKNAYVPYSHYPVGAATLWESGRIVSGCNVENASFGLTLCAERNAVFHAT 72
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFS 113
G+ + K +A++ ++ F SPCG+CRQV+ EFS
Sbjct: 73 FHGERRLKAVAIAV---PTDAFPSPCGACRQVLREFS 106
>gi|238922719|ref|YP_002936232.1| cytidine deaminase [Eubacterium rectale ATCC 33656]
gi|238874391|gb|ACR74098.1| cytidine deaminase [Eubacterium rectale ATCC 33656]
Length = 139
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/124 (40%), Positives = 72/124 (58%), Gaps = 3/124 (2%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
+ L + +I D +Y PYS VGAALL ++ ++TGCN+ENA+Y T CAE+TA KA+
Sbjct: 7 EKLIDTAIAQLDFSYAPYSGFNVGAALLAKNQAVYTGCNIENAAYTPTNCAERTAFFKAV 66
Query: 77 SEGQTKFKRIA-VSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQVGLIT 135
SEG F+ I V + +PCG CRQV+ EF +P +L + DR + T
Sbjct: 67 SEGVRDFEAICIVGGKNQKPTGYTAPCGVCRQVMMEFCNPKTFKIILAI--DRENYRIFT 124
Query: 136 IDGM 139
++ M
Sbjct: 125 LEDM 128
>gi|448456296|ref|ZP_21595099.1| cytidine deaminase [Halorubrum lipolyticum DSM 21995]
gi|445812481|gb|EMA62474.1| cytidine deaminase [Halorubrum lipolyticum DSM 21995]
Length = 133
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 67/97 (69%), Gaps = 3/97 (3%)
Query: 18 NLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAIS 77
+L + A D+A+ PYS+ +VGAAL D T++TGCN+ENA+Y ++ AE+ A ++A+
Sbjct: 2 DLIEAARDALDDAHVPYSEYRVGAALRTADGTVYTGCNIENANYSNSLHAEEVAFAEAVK 61
Query: 78 EGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSS 114
G +F RIAV++ + D V+PCG CRQ +AEF++
Sbjct: 62 NGHREFDRIAVTSGVRDG---VTPCGMCRQTLAEFAA 95
>gi|389576502|ref|ZP_10166530.1| cytidine deaminase [Eubacterium cellulosolvens 6]
gi|389311987|gb|EIM56920.1| cytidine deaminase [Eubacterium cellulosolvens 6]
Length = 162
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/137 (41%), Positives = 75/137 (54%), Gaps = 28/137 (20%)
Query: 18 NLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAIS 77
LA +I+AR AY PYS+ VGAALL + I+TGCNVENASY CAE+ AI KA+S
Sbjct: 8 ELAAAAIRARQMAYAPYSRFLVGAALLDGEGRIWTGCNVENASYPAGSCAERNAICKAVS 67
Query: 78 EGQTKFKRIAV-----SAILPDSNKFVS---------------------PCGSCRQVIAE 111
EG + K IA+ + + + F S PCG CRQV+ E
Sbjct: 68 EGVREIKAIAICGAPKNHVEKTTRSFASNSKGSTDICETAESIEYPECPPCGICRQVMRE 127
Query: 112 FSSPACDIQVLIVKSDR 128
F P D+++++VKS R
Sbjct: 128 FGRP--DLEIVLVKSAR 142
>gi|345566805|gb|EGX49747.1| hypothetical protein AOL_s00078g236 [Arthrobotrys oligospora ATCC
24927]
Length = 154
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/145 (38%), Positives = 82/145 (56%), Gaps = 14/145 (9%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
+ L ++ A+ AYCPYS +VG A+LC D + G N+ENASY +TICAE+TA KA+
Sbjct: 16 KTLGEHAVSAKSLAYCPYSNFRVGCAILCADGSYVLGANIENASYPVTICAERTAFGKAV 75
Query: 77 SEGQTK---FKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSD-RSQVG 132
+G+ + FK + VS D + SPCG CRQ I EF CD++ I D + +
Sbjct: 76 VDGKRESGGFKAVGVST---DISPPASPCGMCRQFIREF----CDLKTPIFMWDSKGEYI 128
Query: 133 LITIDGMYLTLHCCWERGNLVLPDP 157
++T++ + L + L PDP
Sbjct: 129 VMTLEQL---LPMSFGPDQLHKPDP 150
>gi|398409726|ref|XP_003856328.1| hypothetical protein MYCGRDRAFT_102480 [Zymoseptoria tritici
IPO323]
gi|339476213|gb|EGP91304.1| hypothetical protein MYCGRDRAFT_102480 [Zymoseptoria tritici
IPO323]
Length = 167
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/121 (44%), Positives = 72/121 (59%), Gaps = 4/121 (3%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
Q+L +A+ AYCPYSK +VGAALL + TI G NVENA+Y + CAE+ AI A+
Sbjct: 27 QSLQEKCTEAKARAYCPYSKFRVGAALLLSNGTIVQGANVENAAYPVGTCAERVAIGTAV 86
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQVGLITI 136
+G K A+ A+ D + SPCG CRQ I EF P+C I L+ D V ++T+
Sbjct: 87 VQGAKKGDIRAI-AVATDISPPASPCGMCRQFIREFCEPSCPI--LMYDKDGKSV-VMTL 142
Query: 137 D 137
D
Sbjct: 143 D 143
>gi|169824432|ref|YP_001692043.1| cytidine deaminase [Finegoldia magna ATCC 29328]
gi|167831237|dbj|BAG08153.1| cytidine deaminase [Finegoldia magna ATCC 29328]
Length = 131
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/110 (45%), Positives = 70/110 (63%), Gaps = 6/110 (5%)
Query: 19 LANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISE 78
+ +++Q + NAY PYS VG + D F GCN+ENAS+ TICAE+TAISK +SE
Sbjct: 6 MYKIALQYKQNAYTPYSNYNVGCCVKDTDGNYFGGCNIENASFSPTICAERTAISKMVSE 65
Query: 79 GQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDR 128
G K I I+ DS+ F PCG CRQVI EFS+ D ++++ ++D+
Sbjct: 66 G---CKLIDTILIIGDSD-FTYPCGVCRQVIKEFSNE--DTRIIVARNDK 109
>gi|326793834|ref|YP_004311654.1| cytidine deaminase [Marinomonas mediterranea MMB-1]
gi|326544598|gb|ADZ89818.1| cytidine deaminase [Marinomonas mediterranea MMB-1]
Length = 136
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 64/106 (60%), Gaps = 3/106 (2%)
Query: 16 EQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKA 75
+ L L+ A DNAY PYS +VGAA+ + +F+GCNVENASY CAE AIS
Sbjct: 7 QHELLALAHSAMDNAYVPYSNFRVGAAIETESGEVFSGCNVENASYPEGTCAEAGAISSM 66
Query: 76 ISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQV 121
+ G++K + I V + ++ V+PCG CRQ I EF++ +I +
Sbjct: 67 VRAGESKIRHIYVMGM---GDELVTPCGGCRQRIREFATAETEIHI 109
>gi|108758788|ref|YP_633844.1| cytidine deaminase [Myxococcus xanthus DK 1622]
gi|108462668|gb|ABF87853.1| cytidine deaminase [Myxococcus xanthus DK 1622]
Length = 134
Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/116 (43%), Positives = 72/116 (62%), Gaps = 8/116 (6%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
+ L + + R A+ PYS+ VGAA+L D + GCNVENA+YG+T+CAE+ A + A+
Sbjct: 8 ERLFEEAARVRARAHVPYSRFPVGAAVLFADGAVVAGCNVENATYGLTVCAERNAFAAAV 67
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQVG 132
++G T + +AV AI+ D+ + PCG CRQV+AEF Q L V+S Q G
Sbjct: 68 AQGHT--QPVAV-AIVVDTPEPCPPCGMCRQVMAEFGG-----QELPVRSRTPQGG 115
>gi|350633051|gb|EHA21418.1| hypothetical protein ASPNIDRAFT_50782 [Aspergillus niger ATCC 1015]
Length = 132
Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/99 (46%), Positives = 60/99 (60%), Gaps = 3/99 (3%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
+ L+ +I A+D AYCPYSK +VGA +L + G NVENASY + CAE+ A AI
Sbjct: 14 ETLSTKAIAAKDTAYCPYSKFRVGACILTESGEFVQGANVENASYPVGTCAERVAFGSAI 73
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSP 115
G FK IAV+ D SPCG CRQ ++EF++P
Sbjct: 74 VAGHRNFKAIAVAT---DIKPPASPCGMCRQFMSEFTTP 109
>gi|330718399|ref|ZP_08312999.1| cytidine deaminase [Leuconostoc fallax KCTC 3537]
Length = 131
Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/125 (40%), Positives = 76/125 (60%), Gaps = 9/125 (7%)
Query: 12 LDPIEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTA 71
L+P +L + Q +AY PYS VGAAL TI+TG N+EN S+G+T CAE+TA
Sbjct: 2 LEP-PHDLLEKARQTLKHAYVPYSHFPVGAALKSSSGTIYTGVNIENISFGLTNCAERTA 60
Query: 72 ISKAISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVL-----IVKS 126
I AI+ G+ +F + I+ ++N+ ++PCG+CRQV+ EF P I + V++
Sbjct: 61 IFTAIASGEREFDAL---VIIGETNEPIAPCGACRQVMVEFFKPDMPIWLTNTAGKTVQT 117
Query: 127 DRSQV 131
D SQ+
Sbjct: 118 DISQL 122
>gi|373486561|ref|ZP_09577234.1| cytidine deaminase [Holophaga foetida DSM 6591]
gi|372011422|gb|EHP12017.1| cytidine deaminase [Holophaga foetida DSM 6591]
Length = 142
Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/120 (40%), Positives = 75/120 (62%), Gaps = 6/120 (5%)
Query: 11 ALDPIEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKT 70
A P + L + +A +AY PYS+ +VGAAL I TGCNVENASY + +CAE+
Sbjct: 6 AQSPEWEPLLGAAWEAWGHAYAPYSRFKVGAALAFPGGRIVTGCNVENASYPVGLCAERG 65
Query: 71 AISKAISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQ 130
AIS A+++G IA+ ++ ++ PCG+CRQV+AEFS+ ++LI+ ++R +
Sbjct: 66 AISAAVAQGLRLPGPIAL-VVVTEAETLTPPCGACRQVLAEFSA-----ELLILLANRRE 119
>gi|164687979|ref|ZP_02212007.1| hypothetical protein CLOBAR_01624 [Clostridium bartlettii DSM
16795]
gi|164602392|gb|EDQ95857.1| cytidine deaminase [Clostridium bartlettii DSM 16795]
Length = 141
Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 64/106 (60%), Gaps = 8/106 (7%)
Query: 23 SIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQTK 82
+ +A+ Y PYS VGAALL D TI+ GCN+ENA+Y T CAE+TAI KAISEG +
Sbjct: 11 AFEAQKFCYTPYSNFNVGAALLAADGTIYQGCNIENAAYTPTNCAERTAIFKAISEGNKE 70
Query: 83 FKRIAV----SAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIV 124
F IA+ + I + +PC CRQV+AEF CD+ V
Sbjct: 71 FVAIAIVGNKAGIKQGEGDYCAPCAVCRQVMAEF----CDLDTFKV 112
>gi|172056861|ref|YP_001813321.1| cytidine deaminase [Exiguobacterium sibiricum 255-15]
gi|171989382|gb|ACB60304.1| cytidine deaminase [Exiguobacterium sibiricum 255-15]
Length = 132
Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/97 (50%), Positives = 64/97 (65%), Gaps = 4/97 (4%)
Query: 16 EQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKA 75
EQ L I AR+ AY PYSK QVGAALL +D +F GCN+ENA+YG+ CAE+TAI A
Sbjct: 4 EQLLEQAKI-AREKAYVPYSKFQVGAALLTKDGQVFHGCNIENAAYGLCNCAERTAIFSA 62
Query: 76 ISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEF 112
++ ++ +AV A D+ V+PCG CRQV+ E
Sbjct: 63 WAQDAREYAAMAVVA---DTEGPVAPCGQCRQVLFEM 96
>gi|392427202|ref|YP_006468196.1| cytidine deaminase [Desulfosporosinus acidiphilus SJ4]
gi|391357165|gb|AFM42864.1| cytidine deaminase [Desulfosporosinus acidiphilus SJ4]
Length = 151
Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/124 (43%), Positives = 76/124 (61%), Gaps = 6/124 (4%)
Query: 5 DIMEFSALDPIEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMT 64
+I E + L + L N + A AY PYS VGAA L IF+GCNVENASYG+T
Sbjct: 10 EITESNILPEVRDELINKAAAAYQQAYVPYSHYPVGAAALFSSGLIFSGCNVENASYGLT 69
Query: 65 ICAEKTAISKAISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIV 124
+CAE+ AI +A ++G+ K + I ++ +++F SPCG+CRQVI EF+ D V++V
Sbjct: 70 VCAERNAIFQAAAKGERKLEAIVIAV---PTDEFPSPCGACRQVIREFAE---DCIVILV 123
Query: 125 KSDR 128
R
Sbjct: 124 NGRR 127
>gi|389624779|ref|XP_003710043.1| cytidine deaminase [Magnaporthe oryzae 70-15]
gi|351649572|gb|EHA57431.1| cytidine deaminase [Magnaporthe oryzae 70-15]
Length = 164
Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/114 (45%), Positives = 67/114 (58%), Gaps = 9/114 (7%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDD--TIFTGCNVENASYGMTICAEKTAISK 74
Q L S A+ AYCPYS +VGA LL DD + +G NVENASY + CAE+ A+ K
Sbjct: 33 QQLQRRSEAAKSTAYCPYSNFRVGATLLSIDDKNSYISGANVENASYPVGTCAERVALGK 92
Query: 75 AISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDR 128
A++EG +F+ +AVS D SPCG CRQ I EFS D+ + I D+
Sbjct: 93 AVTEGHRRFRALAVST---DITPPASPCGMCRQFIREFS----DLHMPIFMFDK 139
>gi|302335000|ref|YP_003800207.1| cytidine deaminase [Olsenella uli DSM 7084]
gi|301318840|gb|ADK67327.1| cytidine deaminase [Olsenella uli DSM 7084]
Length = 148
Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/121 (42%), Positives = 71/121 (58%), Gaps = 3/121 (2%)
Query: 16 EQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKA 75
+ L +I AR+ AY PYS VGAALL D ++ GCN+ENA+Y CAE+TAI KA
Sbjct: 3 DSELVREAIVAREGAYVPYSHFSVGAALLDADGRVWHGCNIENAAYSPGNCAERTAIFKA 62
Query: 76 ISEGQTKFKRIAV--SAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQVGL 133
+SEG F IAV A + + +PCG CRQV+ EF P +V++ +S + G
Sbjct: 63 VSEGVRGFVAIAVVGGAEGRPISDWCAPCGVCRQVLREFCDPG-SFRVVLARSPQDMRGY 121
Query: 134 I 134
+
Sbjct: 122 L 122
>gi|124027705|ref|YP_001013025.1| cytidine deaminase [Hyperthermus butylicus DSM 5456]
gi|123978399|gb|ABM80680.1| Cytidine deaminase [Hyperthermus butylicus DSM 5456]
Length = 150
Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 44/97 (45%), Positives = 63/97 (64%), Gaps = 3/97 (3%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
+ L + Q N+Y PYS + V A +L D T++ G NVEN SYG+TICAE+ A++ I
Sbjct: 9 EELFQRAKQVIGNSYAPYSGVHVAAVVLADDGTVYLGVNVENVSYGLTICAERAAVAAMI 68
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFS 113
+ G+ +RI AI+ D+ + PCG+CRQVIAEF+
Sbjct: 69 TAGR---RRIKAVAIVSDTTLPLPPCGACRQVIAEFA 102
>gi|197303896|ref|ZP_03168930.1| hypothetical protein RUMLAC_02633 [Ruminococcus lactaris ATCC
29176]
gi|197297011|gb|EDY31577.1| cytidine deaminase [Ruminococcus lactaris ATCC 29176]
Length = 143
Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/116 (41%), Positives = 69/116 (59%), Gaps = 1/116 (0%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
Q L ++ + +AY PYS QVGAALL ++ GCN+ENA+Y + CAE+TA KA+
Sbjct: 7 QRLIRIAEEQMSHAYAPYSHFQVGAALLTAGGKVYAGCNIENAAYTPSNCAERTAFFKAV 66
Query: 77 SEGQTKFKRIA-VSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQV 131
SEG+ KF I V + + ++ +PCG CRQV+ EF P +L V + +V
Sbjct: 67 SEGERKFSAICIVGGMNGIAVEYTAPCGVCRQVMMEFCQPETFQIILAVDEENYKV 122
>gi|310779254|ref|YP_003967587.1| cytidine deaminase [Ilyobacter polytropus DSM 2926]
gi|309748577|gb|ADO83239.1| cytidine deaminase [Ilyobacter polytropus DSM 2926]
Length = 132
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/121 (41%), Positives = 77/121 (63%), Gaps = 6/121 (4%)
Query: 19 LANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISE 78
L + +I+AR+NAY YS +VGA ++ + + G NVENASYG+T C E+TAI A++
Sbjct: 11 LIDEAIEARENAYVKYSGFKVGAVVIDEKGNHYRGANVENASYGLTNCGERTAIFSAVTN 70
Query: 79 GQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQVGLITIDG 138
G K IAV I+ D+ VSPCG+CRQVI EF A + +I+ + + + +++I+
Sbjct: 71 G---MKNIAVICIVADTTGPVSPCGACRQVIKEF---AYEDTAIILANLKKEYKILSIED 124
Query: 139 M 139
+
Sbjct: 125 L 125
>gi|326472161|gb|EGD96170.1| cytidine deaminase [Trichophyton tonsurans CBS 112818]
gi|326476977|gb|EGE00987.1| cytidine deaminase [Trichophyton equinum CBS 127.97]
Length = 141
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 52/121 (42%), Positives = 68/121 (56%), Gaps = 5/121 (4%)
Query: 7 MEFSALDPIEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTIC 66
M S D + L +I A+D AYC YSK +VGA LL + TG NVEN SY + +C
Sbjct: 1 MAASITDVEVETLGQKAIAAKDRAYCVYSKFRVGACLLTESGEYITGVNVENVSYPVGVC 60
Query: 67 AEKTAISKAISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKS 126
AE+ A+ A++ G T+FK IAVS D N SPCG CRQ + +F A D + +
Sbjct: 61 AERCAMGTAVAAGHTRFKAIAVST---DINPGASPCGMCRQFMRQFC--ALDFPIYMYGG 115
Query: 127 D 127
D
Sbjct: 116 D 116
>gi|448624627|ref|ZP_21670575.1| cytidine deaminase [Haloferax denitrificans ATCC 35960]
gi|445749832|gb|EMA01274.1| cytidine deaminase [Haloferax denitrificans ATCC 35960]
Length = 142
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 46/108 (42%), Positives = 69/108 (63%), Gaps = 7/108 (6%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
++L + +A DNAY PYS+ VGAAL D ++ GCN+ENA+Y ++ AE+ AI++A+
Sbjct: 3 ESLVERAREALDNAYVPYSEYTVGAALRTADGEVYVGCNIENANYSNSLHAEEVAIAEAV 62
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIV 124
G T+F R+ V++ D V+PCG CRQ +AEF CD + +V
Sbjct: 63 KNGHTEFDRLVVTSGARDG---VTPCGMCRQTLAEF----CDEDLPVV 103
>gi|448603012|ref|ZP_21656833.1| cytidine deaminase [Haloferax sulfurifontis ATCC BAA-897]
gi|445746208|gb|ELZ97670.1| cytidine deaminase [Haloferax sulfurifontis ATCC BAA-897]
Length = 142
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 46/108 (42%), Positives = 69/108 (63%), Gaps = 7/108 (6%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
++L + +A DNAY PYS+ VGAAL D ++ GCN+ENA+Y ++ AE+ AI++A+
Sbjct: 3 ESLVERAREALDNAYVPYSEYTVGAALRTADGEVYVGCNIENANYSNSLHAEEVAIAEAV 62
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIV 124
G T+F R+ V++ D V+PCG CRQ +AEF CD + +V
Sbjct: 63 KNGHTEFDRLVVTSGARDG---VTPCGMCRQTLAEF----CDEDLPVV 103
>gi|392403939|ref|YP_006440551.1| cytidine deaminase [Turneriella parva DSM 21527]
gi|390611893|gb|AFM13045.1| cytidine deaminase [Turneriella parva DSM 21527]
Length = 137
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 47/98 (47%), Positives = 65/98 (66%), Gaps = 3/98 (3%)
Query: 19 LANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISE 78
L +I+A + AY PYS + VGAALL D ++ GCNVENASYG+TICAE++A+S A+ +
Sbjct: 14 LREQAIKASNQAYAPYSGIHVGAALLASDGNVYLGCNVENASYGLTICAERSAVSAAMQK 73
Query: 79 GQTKFKRIAVSAILPDSNKF--VSPCGSCRQVIAEFSS 114
K + + AI +NK + PCG+CRQV+ EF
Sbjct: 74 VTEKRGEM-IRAIYIVNNKVPEIPPCGACRQVLFEFGK 110
>gi|379726823|ref|YP_005319008.1| cytidine deaminase [Melissococcus plutonius DAT561]
gi|376317726|dbj|BAL61513.1| cytidine deaminase [Melissococcus plutonius DAT561]
Length = 130
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 46/104 (44%), Positives = 69/104 (66%), Gaps = 5/104 (4%)
Query: 21 NLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQ 80
L++ A AY PYS VGA L+ +++ + G N+ENASYG+T CAE+TAI KA+SEG+
Sbjct: 8 QLAMTAMQKAYVPYSNFPVGACLITKNEKTYLGTNIENASYGLTNCAERTAIFKAVSEGE 67
Query: 81 TKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIV 124
F+ + ++ + + PCG+CRQV+ EF SP D+ V++V
Sbjct: 68 RDFQCLVIAG---QTAAPIVPCGACRQVMIEFFSP--DMPVILV 106
>gi|162148746|ref|YP_001603207.1| cytidine deaminase [Gluconacetobacter diazotrophicus PAl 5]
gi|209545488|ref|YP_002277717.1| cytidine deaminase [Gluconacetobacter diazotrophicus PAl 5]
gi|161787323|emb|CAP56917.1| putative cytidine deaminase [Gluconacetobacter diazotrophicus PAl
5]
gi|209533165|gb|ACI53102.1| cytidine deaminase [Gluconacetobacter diazotrophicus PAl 5]
Length = 132
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 44/107 (41%), Positives = 63/107 (58%), Gaps = 3/107 (2%)
Query: 16 EQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKA 75
+ L + ++ R NAY PYS+ VGAAL C D IF GCN ENA+Y ICAE AI+
Sbjct: 3 DDPLIDAAVAVRANAYAPYSRFHVGAALRCADGRIFVGCNTENAAYPEGICAEGGAIAAM 62
Query: 76 ISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVL 122
++ G + I +S ++ +PCG CRQ I EFS+P ++++
Sbjct: 63 VAGGGRQIADIVISG---GGDRACAPCGGCRQKIREFSAPGLTVRMV 106
>gi|195472953|ref|XP_002088762.1| GE18747 [Drosophila yakuba]
gi|194174863|gb|EDW88474.1| GE18747 [Drosophila yakuba]
Length = 264
Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 52/126 (41%), Positives = 72/126 (57%), Gaps = 4/126 (3%)
Query: 1 MVGHDIMEFSALDPIEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENAS 60
M+ + F A+ + L ++ AR AY PYSK +VGAA + I+TGCN+EN +
Sbjct: 108 MLEEYTVAFCAVGEDGRELLEAALSARRCAYAPYSKFKVGAAFRAKCGRIYTGCNIENVA 167
Query: 61 YGMTICAEKTAISKAISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQ 120
+ CAE+ A++K ISEG+ K+ AV A PD F +PCG CRQ I EF DI
Sbjct: 168 FTPGNCAERCALAKGISEGEKKYTAGAVVAYHPDG--FTTPCGVCRQFILEFVQR--DIP 223
Query: 121 VLIVKS 126
+ I K+
Sbjct: 224 IYIAKA 229
>gi|420156278|ref|ZP_14663121.1| cytidine deaminase [Clostridium sp. MSTE9]
gi|394757576|gb|EJF40593.1| cytidine deaminase [Clostridium sp. MSTE9]
Length = 138
Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 48/113 (42%), Positives = 71/113 (62%), Gaps = 3/113 (2%)
Query: 16 EQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKA 75
++ L +I+AR+ AY PYS VGAALL D ++ GCN+ENA+Y + CAE+TA KA
Sbjct: 3 DKELVKAAIEAREMAYVPYSGFAVGAALLTADGKLYQGCNIENAAYTPSNCAERTAFFKA 62
Query: 76 ISEGQTKFKRIAVSAILPDS--NKFVSPCGSCRQVIAEFSSPACDIQVLIVKS 126
+S G+ F IA+ + +++ +PCG CRQV+ EF P ++L+ KS
Sbjct: 63 VSIGERDFAAIAIVGGKHGAPISEYCAPCGVCRQVMMEFCDPD-TFRILLAKS 114
>gi|448678337|ref|ZP_21689344.1| cytidine deaminase [Haloarcula argentinensis DSM 12282]
gi|445772324|gb|EMA23369.1| cytidine deaminase [Haloarcula argentinensis DSM 12282]
Length = 128
Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 47/108 (43%), Positives = 68/108 (62%), Gaps = 7/108 (6%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
++L + + A D AY PYS+ VGAAL D T++TGCN+ENA+Y ++ AE+ AI A+
Sbjct: 2 EDLLDAARDAIDEAYAPYSEYTVGAALETSDGTVYTGCNIENANYSNSLHAEEVAIGAAV 61
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIV 124
S+G F+R+AV++ D V+PCG CRQ +EF CD I+
Sbjct: 62 SDGYQSFERVAVTSGKRDG---VTPCGMCRQTFSEF----CDESFEII 102
>gi|118372387|ref|XP_001019390.1| cytidine deaminase family protein [Tetrahymena thermophila]
gi|89301157|gb|EAR99145.1| cytidine deaminase family protein [Tetrahymena thermophila SB210]
Length = 155
Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 47/98 (47%), Positives = 63/98 (64%), Gaps = 3/98 (3%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
++ L+ + + AYCPYSK VG L QD + G NVENASYG+TICAE+ AI A+
Sbjct: 23 ESYIKLAQEVKKKAYCPYSKFHVGCILFDQDGKMHEGVNVENASYGLTICAERNAIISAV 82
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSS 114
++G K I++ I + K SPCG+CRQVI EFS+
Sbjct: 83 TKG---MKSISLIVINCKTEKVGSPCGACRQVIGEFSN 117
>gi|375088657|ref|ZP_09734995.1| cytidine deaminase [Dolosigranulum pigrum ATCC 51524]
gi|374561622|gb|EHR32961.1| cytidine deaminase [Dolosigranulum pigrum ATCC 51524]
Length = 135
Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 53/137 (38%), Positives = 81/137 (59%), Gaps = 9/137 (6%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
Q L ++ D AY PYS+ VGAA+L I+ GCN+ENASY + CAE+TA+ AI
Sbjct: 8 QELKQVAHGMLDKAYVPYSQFPVGAAVLTDSGKIYGGCNIENASYSLGNCAERTALFSAI 67
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQVGLITI 136
++G F+ + V+ ++ +SPCG+CRQVI+EF P ++ V+++ S GLI
Sbjct: 68 AQGDQSFECLVVTG---NTEGPISPCGACRQVISEFCPP--EMPVILMNSH----GLIQE 118
Query: 137 DGMYLTLHCCWERGNLV 153
+ L ++ G+LV
Sbjct: 119 TTVGTLLPGAFKSGDLV 135
>gi|297582718|ref|YP_003698498.1| cytidine deaminase [Bacillus selenitireducens MLS10]
gi|297141175|gb|ADH97932.1| cytidine deaminase [Bacillus selenitireducens MLS10]
Length = 132
Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/116 (43%), Positives = 68/116 (58%), Gaps = 5/116 (4%)
Query: 16 EQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKA 75
++ L + + +AY PYSK VGAA L DD + TG NVEN S+G T CAE+TA+ A
Sbjct: 3 KEQLMQQARSIKQHAYVPYSKFPVGAAFLMTDDRVITGVNVENVSFGATNCAERTAMFTA 62
Query: 76 ISEGQTK--FKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRS 129
++EG K FK +AV+ D+ F+ PC CRQV+AE P I + K + S
Sbjct: 63 MAEGYQKGDFKAVAVAG---DTEDFLPPCAICRQVMAELCPPDMPIYLTNAKGEIS 115
>gi|291523026|emb|CBK81319.1| cytidine deaminase [Coprococcus catus GD/7]
Length = 159
Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 47/112 (41%), Positives = 68/112 (60%), Gaps = 2/112 (1%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
Q L + + +Y PYS +VGAALL D TI+TGCN+ENA+Y T CAE+TA KA+
Sbjct: 19 QKLIKTAAEQLRFSYTPYSHFKVGAALLAADGTIYTGCNIENAAYTPTNCAERTAFFKAV 78
Query: 77 SEGQTKFKRIAVSAILPDS-NKFVSPCGSCRQVIAEFSSPACDIQVLIVKSD 127
SEG F+ I + + + + +PCG CRQV+ EF P ++++ +D
Sbjct: 79 SEGVRDFRAICIVGGMNGVLSGYTAPCGVCRQVMMEFCDPE-TFEIILAAAD 129
>gi|340508487|gb|EGR34179.1| hypothetical protein IMG5_021320 [Ichthyophthirius multifiliis]
Length = 155
Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/127 (39%), Positives = 78/127 (61%), Gaps = 6/127 (4%)
Query: 13 DPIEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAI 72
+ I+Q + + + +Y PYSK VG+ ++ Q+D + G NVENASYG++ICAE+ AI
Sbjct: 16 EQIKQYINEVRQIKEEYSYAPYSKFHVGSLVIDQNDKKYIGVNVENASYGLSICAERNAI 75
Query: 73 SKAISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQVG 132
+S+G K K I V+ ++ K SPCG+CRQVIAEFS D ++I +++ Q
Sbjct: 76 FTGVSQGLKKIKLIVVNC---NTIKVGSPCGACRQVIAEFSD---DKTIIICSNEQDQYE 129
Query: 133 LITIDGM 139
+ + G+
Sbjct: 130 ITDLQGI 136
>gi|302670915|ref|YP_003830875.1| cytidine deaminase [Butyrivibrio proteoclasticus B316]
gi|302395388|gb|ADL34293.1| cytidine deaminase Cdd [Butyrivibrio proteoclasticus B316]
Length = 141
Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 47/98 (47%), Positives = 64/98 (65%), Gaps = 2/98 (2%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
+NL ++ R+ +Y PYS VGAALL + TI+TGCN+ENAS+ T CAE+TA KA+
Sbjct: 7 ENLIEKALDMRNYSYTPYSHYNVGAALLAANGTIYTGCNIENASFTPTNCAERTAFFKAV 66
Query: 77 SEGQTKFKRIAVSAILPDSNKF--VSPCGSCRQVIAEF 112
SEG +F IA+ + + SPCG CRQV++EF
Sbjct: 67 SEGVKEFTAIAICGGADGATELDDCSPCGVCRQVMSEF 104
>gi|333897751|ref|YP_004471625.1| cytidine deaminase [Thermoanaerobacterium xylanolyticum LX-11]
gi|333113016|gb|AEF17953.1| cytidine deaminase [Thermoanaerobacterium xylanolyticum LX-11]
Length = 131
Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 46/107 (42%), Positives = 71/107 (66%), Gaps = 5/107 (4%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
+ L ++ +AR++AY PYSK +VGA ++ + I+ GCN+EN+SYG+T CAE+TA+ A
Sbjct: 4 EKLLEVAKEARESAYAPYSKFKVGACVITNNGKIYKGCNIENSSYGLTNCAERTALFSAY 63
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLI 123
+ G + IAV A D++ VSPCG+CRQV+ E D+ V++
Sbjct: 64 ANGDRDIEAIAVVA---DTDGPVSPCGACRQVMYELGGE--DMTVIL 105
>gi|338536822|ref|YP_004670156.1| cytidine deaminase [Myxococcus fulvus HW-1]
gi|337262918|gb|AEI69078.1| cytidine deaminase [Myxococcus fulvus HW-1]
Length = 134
Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 49/114 (42%), Positives = 71/114 (62%), Gaps = 8/114 (7%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
+ L + + R A+ PYS+ VGAA+L +D + GCNVENA+YG+T+CAE+ A + +
Sbjct: 8 ERLFEEAARVRARAHVPYSRFPVGAAVLYEDGAVVAGCNVENATYGLTVCAERNAFAAGV 67
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQ 130
++G T K +AV AI+ D+ + PCG CRQV+AEF Q L V+S Q
Sbjct: 68 AQGHT--KPVAV-AIVVDTPQPCPPCGMCRQVMAEFGG-----QDLPVRSRTPQ 113
>gi|358068320|ref|ZP_09154786.1| hypothetical protein HMPREF9333_01667 [Johnsonella ignava ATCC
51276]
gi|356693473|gb|EHI55148.1| hypothetical protein HMPREF9333_01667 [Johnsonella ignava ATCC
51276]
Length = 172
Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 51/103 (49%), Positives = 64/103 (62%), Gaps = 8/103 (7%)
Query: 30 AYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQTKFKRIAV- 88
AY PYS VGAALL + I+TG N+ENASY T CAE+TA KA+S G+ +FK IAV
Sbjct: 53 AYAPYSHFHVGAALLGKSGNIYTGINIENASYTPTNCAERTAFFKAVSHGEKEFKAIAVC 112
Query: 89 ---SAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDR 128
I+ + +V PCG CRQV+ EF P D + I KS +
Sbjct: 113 GGRDGIV---DSYVFPCGVCRQVMREFCRPE-DFIIYIAKSPK 151
>gi|89895852|ref|YP_519339.1| hypothetical protein DSY3106 [Desulfitobacterium hafniense Y51]
gi|219670282|ref|YP_002460717.1| cytidine deaminase [Desulfitobacterium hafniense DCB-2]
gi|423076638|ref|ZP_17065346.1| cytidine deaminase [Desulfitobacterium hafniense DP7]
gi|89335300|dbj|BAE84895.1| hypothetical protein [Desulfitobacterium hafniense Y51]
gi|219540542|gb|ACL22281.1| cytidine deaminase [Desulfitobacterium hafniense DCB-2]
gi|361852443|gb|EHL04703.1| cytidine deaminase [Desulfitobacterium hafniense DP7]
Length = 139
Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 45/97 (46%), Positives = 62/97 (63%), Gaps = 3/97 (3%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
+ L + +A +AY PYS VGAA L + I GCNVENASYG+TICAE+ A+ +
Sbjct: 13 EELIRRAQKAYQSAYVPYSNYPVGAATLWESGRIIAGCNVENASYGLTICAERNAVFHSA 72
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFS 113
G+ + K +AV+ ++ F SPCG+CRQV+ EFS
Sbjct: 73 YHGERRLKAVAVAV---PTDAFPSPCGACRQVLREFS 106
>gi|407476672|ref|YP_006790549.1| cytidine deaminase [Exiguobacterium antarcticum B7]
gi|407060751|gb|AFS69941.1| Cytidine deaminase [Exiguobacterium antarcticum B7]
Length = 132
Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 45/87 (51%), Positives = 60/87 (68%), Gaps = 3/87 (3%)
Query: 26 ARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQTKFKR 85
AR+ AY PYSK QVGAALL +D +F GCN+ENA+YG+ CAE+TAI A ++ ++
Sbjct: 13 AREKAYVPYSKFQVGAALLTKDGQVFHGCNIENAAYGLCNCAERTAIFSAWAQDAREYAA 72
Query: 86 IAVSAILPDSNKFVSPCGSCRQVIAEF 112
+AV A D+ V+PCG CRQV+ E
Sbjct: 73 MAVVA---DTEGPVAPCGQCRQVLFEM 96
>gi|78212207|ref|YP_380986.1| cytidine deaminase [Synechococcus sp. CC9605]
gi|78196666|gb|ABB34431.1| putative cytidine/deoxycytidine deaminase [Synechococcus sp.
CC9605]
Length = 128
Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/114 (43%), Positives = 73/114 (64%), Gaps = 7/114 (6%)
Query: 14 PIEQNLANLSIQAR---DNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKT 70
P + N +L +QAR +A+CPYS VGAA+ C+D ++ GCNVENASYG++ICAE+
Sbjct: 7 PAKNNAESLLVQARRAASHAHCPYSNFHVGAAVRCEDGSVIDGCNVENASYGLSICAERV 66
Query: 71 AISKAISEGQTKFKRIAVSAILPDSN---KFVSPCGSCRQVIAEFSSPACDIQV 121
A+ AIS+G+ + +A+S I S+ + PCG+CRQV+ E IQ+
Sbjct: 67 ALFTAISQGKQPIE-LAMSCIDAQSDAPPESRMPCGACRQVMQELLPANAAIQI 119
>gi|342217147|ref|ZP_08709794.1| cytidine deaminase [Peptoniphilus sp. oral taxon 375 str. F0436]
gi|341588037|gb|EGS31437.1| cytidine deaminase [Peptoniphilus sp. oral taxon 375 str. F0436]
Length = 134
Score = 93.2 bits (230), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 46/118 (38%), Positives = 71/118 (60%), Gaps = 4/118 (3%)
Query: 16 EQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKA 75
+++L +++ ++ AY PYS VGA +L + I+ GCN+E ASY TICAE+ AI KA
Sbjct: 3 KKDLFKEALKMKERAYVPYSHFHVGACVLGDNGKIYGGCNIETASYSPTICAERVAIFKA 62
Query: 76 ISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQVGL 133
IS+G + IAV+ D+ PCG CRQV+ EF+ P+ + ++ + D + L
Sbjct: 63 ISDGVQSIQAIAVTGDAKDT----MPCGVCRQVMVEFADPSMKVYIVNKEDDFKEYSL 116
>gi|55377335|ref|YP_135185.1| cytidine deaminase [Haloarcula marismortui ATCC 43049]
gi|344211470|ref|YP_004795790.1| cytidine deaminase [Haloarcula hispanica ATCC 33960]
gi|448640125|ref|ZP_21677273.1| cytidine deaminase [Haloarcula sinaiiensis ATCC 33800]
gi|448657090|ref|ZP_21682629.1| cytidine deaminase [Haloarcula californiae ATCC 33799]
gi|448667025|ref|ZP_21685670.1| cytidine deaminase [Haloarcula amylolytica JCM 13557]
gi|55230060|gb|AAV45479.1| cytidine deaminase [Haloarcula marismortui ATCC 43049]
gi|343782825|gb|AEM56802.1| cytidine deaminase [Haloarcula hispanica ATCC 33960]
gi|445762652|gb|EMA13873.1| cytidine deaminase [Haloarcula sinaiiensis ATCC 33800]
gi|445763132|gb|EMA14336.1| cytidine deaminase [Haloarcula californiae ATCC 33799]
gi|445772156|gb|EMA23212.1| cytidine deaminase [Haloarcula amylolytica JCM 13557]
Length = 128
Score = 93.2 bits (230), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 46/108 (42%), Positives = 68/108 (62%), Gaps = 7/108 (6%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
++L + + A D AY PYS+ VGAAL D +++TGCN+ENA+Y ++ AE+ AI A+
Sbjct: 2 EDLLDAARDAIDEAYAPYSEYTVGAALETSDGSVYTGCNIENANYSNSLHAEEVAIGAAV 61
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIV 124
S+G F+R+AV++ D V+PCG CRQ +EF CD I+
Sbjct: 62 SDGHRSFERVAVTSGKRDG---VTPCGMCRQTFSEF----CDESFEII 102
>gi|375089508|ref|ZP_09735834.1| cytidine deaminase [Facklamia languida CCUG 37842]
gi|374566906|gb|EHR38140.1| cytidine deaminase [Facklamia languida CCUG 37842]
Length = 137
Score = 93.2 bits (230), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 47/111 (42%), Positives = 70/111 (63%), Gaps = 3/111 (2%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
++L + + RD+AYCPYS+ VG A+L +D ++TG NVEN S+G T CAE++AI AI
Sbjct: 9 EDLVSQARLVRDHAYCPYSQFPVGCAILTKDSIVYTGVNVENVSFGATNCAERSAIFTAI 68
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSD 127
+EG + K I A+ ++ F+ PC CRQV+ E + P D V + + D
Sbjct: 69 TEGY-RPKFIQAIAVAGETEDFLPPCCICRQVLVEMADP--DTPVYLTRKD 116
>gi|213404302|ref|XP_002172923.1| cytidine deaminase [Schizosaccharomyces japonicus yFS275]
gi|212000970|gb|EEB06630.1| cytidine deaminase [Schizosaccharomyces japonicus yFS275]
Length = 132
Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 50/90 (55%), Positives = 57/90 (63%), Gaps = 5/90 (5%)
Query: 25 QARDNAYCPYSKLQVGAALLCQDD-TIFTGCNVENASYGMTICAEKTAISKAISEGQTKF 83
+A AYCPYS VGAALLC D T+ G NVENASY + ICAE+TAI KAI+ G KF
Sbjct: 15 EAVSRAYCPYSNFAVGAALLCDDKKTVIQGANVENASYSVGICAERTAIVKAITSGHNKF 74
Query: 84 KRIAVSAILPDSNKFVSPCGSCRQVIAEFS 113
+ V VSPCG CRQ+I EFS
Sbjct: 75 MALGVMC----HKGRVSPCGICRQMIREFS 100
>gi|448688760|ref|ZP_21694497.1| cytidine deaminase [Haloarcula japonica DSM 6131]
gi|445778630|gb|EMA29572.1| cytidine deaminase [Haloarcula japonica DSM 6131]
Length = 128
Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 46/108 (42%), Positives = 68/108 (62%), Gaps = 7/108 (6%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
++L + + A D AY PYS+ VGAAL D +++TGCN+ENA+Y ++ AE+ AI A+
Sbjct: 2 EDLLDAARDAIDEAYAPYSEYTVGAALETSDGSVYTGCNIENANYSNSLHAEEVAIGAAV 61
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIV 124
S+G F+R+AV++ D V+PCG CRQ +EF CD I+
Sbjct: 62 SDGHQSFERVAVTSGKRDG---VTPCGMCRQTFSEF----CDESFEII 102
>gi|118587400|ref|ZP_01544826.1| cytidine deaminase [Oenococcus oeni ATCC BAA-1163]
gi|421185847|ref|ZP_15643245.1| cytidine deaminase [Oenococcus oeni AWRIB418]
gi|118432224|gb|EAV38964.1| cytidine deaminase [Oenococcus oeni ATCC BAA-1163]
gi|399968389|gb|EJO02830.1| cytidine deaminase [Oenococcus oeni AWRIB418]
Length = 132
Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 47/105 (44%), Positives = 65/105 (61%), Gaps = 10/105 (9%)
Query: 8 EFSALDPIEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICA 67
E+SAL + Q D AY PYS V AALL DD IF GCN+ENA++G T+CA
Sbjct: 5 EYSALKKVAD-------QELDKAYIPYSHFAVAAALLSADDRIFPGCNIENAAFGSTMCA 57
Query: 68 EKTAISKAISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEF 112
E+TAI A++ G +FK + +S + ++PCG+CRQV+ E+
Sbjct: 58 ERTAIFSAVAAGCHQFKALVISG---RTEGAIAPCGACRQVMVEW 99
>gi|399924388|ref|ZP_10781746.1| cytidine deaminase [Peptoniphilus rhinitidis 1-13]
Length = 137
Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 50/98 (51%), Positives = 67/98 (68%), Gaps = 5/98 (5%)
Query: 17 QNLANLSIQARDNA-YCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKA 75
+ L L+I ARDN+ Y PYS VG A+ +D ++TG N+E ASY T CAE+TAI KA
Sbjct: 4 EKLIELAIYARDNSTYTPYSHFNVGCAVEMEDGEVYTGGNIEIASYSPTNCAERTAIFKA 63
Query: 76 ISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFS 113
+S+G+ + K+I AI+ DS+ + PCG CRQVI EFS
Sbjct: 64 VSDGKREIKKI---AIVGDSD-YTFPCGVCRQVIREFS 97
>gi|335047401|ref|ZP_08540422.1| cytidine deaminase [Parvimonas sp. oral taxon 110 str. F0139]
gi|333761209|gb|EGL38764.1| cytidine deaminase [Parvimonas sp. oral taxon 110 str. F0139]
Length = 131
Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 47/114 (41%), Positives = 71/114 (62%), Gaps = 5/114 (4%)
Query: 15 IEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISK 74
I + + + ++ ++ AY PYS +VGA +L ++ GCN+ENASY T+CAE+ AI K
Sbjct: 3 IYEKMIDCALDSQKKAYTPYSNFKVGACVLTDSGKLYGGCNIENASYTPTVCAERVAIFK 62
Query: 75 AISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDR 128
AI +G+ +IAV + N PCG CRQVI EF S C+I +I+K+++
Sbjct: 63 AIYDGEKMITKIAV---VGKENSLTYPCGVCRQVIREFCSNDCEI--IIIKNEQ 111
>gi|210623632|ref|ZP_03293958.1| hypothetical protein CLOHIR_01908 [Clostridium hiranonis DSM 13275]
gi|210153502|gb|EEA84508.1| hypothetical protein CLOHIR_01908 [Clostridium hiranonis DSM 13275]
Length = 128
Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 47/97 (48%), Positives = 61/97 (62%), Gaps = 1/97 (1%)
Query: 23 SIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQTK 82
+ +A NAY PYSK +VGA + D F G N+ENASYG+T CAE++AI A S G K
Sbjct: 7 AFEAMQNAYAPYSKYKVGACVETIDGKYFLGANIENASYGLTNCAERSAIFAAYSNGYRK 66
Query: 83 FKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDI 119
K I AI+ + K V+PCG+CRQV++E DI
Sbjct: 67 -KHIKAIAIVSNGEKLVTPCGACRQVLSELIEKDVDI 102
>gi|15673421|ref|NP_267595.1| cytidine deaminase [Lactococcus lactis subsp. lactis Il1403]
gi|281491995|ref|YP_003353975.1| cytidine deaminase [Lactococcus lactis subsp. lactis KF147]
gi|385830908|ref|YP_005868721.1| cytidine deaminase [Lactococcus lactis subsp. lactis CV56]
gi|418037720|ref|ZP_12676090.1| Cytidine deaminase [Lactococcus lactis subsp. cremoris CNCM I-1631]
gi|12724429|gb|AAK05537.1|AE006374_2 cytidine deaminase [Lactococcus lactis subsp. lactis Il1403]
gi|281375704|gb|ADA65208.1| Cytidine deaminase [Lactococcus lactis subsp. lactis KF147]
gi|326406916|gb|ADZ63987.1| cytidine deaminase [Lactococcus lactis subsp. lactis CV56]
gi|354694243|gb|EHE93928.1| Cytidine deaminase [Lactococcus lactis subsp. cremoris CNCM I-1631]
Length = 130
Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 51/97 (52%), Positives = 63/97 (64%), Gaps = 4/97 (4%)
Query: 31 YCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQTKFKRIAVSA 90
Y PYS VGAA D I TGCN+ENAS+G++ CAE+TAI KAISEG F + V
Sbjct: 19 YVPYSHFPVGAAFHTTDGRIITGCNIENASFGLSNCAERTAIFKAISEGLKDFDALYV-- 76
Query: 91 ILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSD 127
++ + +SPCG+CRQVIAEF PA LI K+D
Sbjct: 77 -FGETEEPISPCGACRQVIAEF-CPADMPVFLISKND 111
>gi|260436422|ref|ZP_05790392.1| cytidine deaminase [Synechococcus sp. WH 8109]
gi|260414296|gb|EEX07592.1| cytidine deaminase [Synechococcus sp. WH 8109]
Length = 143
Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 48/107 (44%), Positives = 69/107 (64%), Gaps = 7/107 (6%)
Query: 12 LDPIEQNLANLSIQAR---DNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAE 68
+ P E N +L ++AR + A+CPYS VGAA+ C D ++ GCNVE+ASYG++ICAE
Sbjct: 5 MAPAENNAESLLVRARQAAERAHCPYSNFHVGAAVRCDDGSVIEGCNVESASYGLSICAE 64
Query: 69 KTAISKAISEGQTKFKRIAVSAILPDSNKFVS---PCGSCRQVIAEF 112
+ A+ AIS+G+ + +AVS I S+ PCG+CRQV+ E
Sbjct: 65 RVALFSAISQGKKPLE-LAVSCIDTQSDAVPGSRMPCGACRQVMQEL 110
>gi|303321698|ref|XP_003070843.1| cytidine deaminase family protein [Coccidioides posadasii C735
delta SOWgp]
gi|240110540|gb|EER28698.1| cytidine deaminase family protein [Coccidioides posadasii C735
delta SOWgp]
Length = 155
Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 54/125 (43%), Positives = 71/125 (56%), Gaps = 23/125 (18%)
Query: 16 EQNLANLS---IQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAI 72
E LA LS I A+D AYCPYSK +VGA+LL +D T F G NVENASY + ICAEK
Sbjct: 8 EAELATLSAKAIGAKDVAYCPYSKFRVGASLLAEDGTFFVGANVENASYPVGICAEKCVF 67
Query: 73 SKAI---------------SEGQTKFKRIAVSA-ILPDSNKFVSPCGSCRQVIAEFSSPA 116
A+ + G FK +AV++ I+P + SPCGSCRQ + +F P+
Sbjct: 68 GTAVVSPFQRDTFPRFPRSTAGHRSFKAVAVASDIIPGT----SPCGSCRQFMRQFCPPS 123
Query: 117 CDIQV 121
+ +
Sbjct: 124 FPVYM 128
>gi|418002194|ref|ZP_12642316.1| cytidine deaminase [Lactobacillus casei UCD174]
gi|410544622|gb|EKQ18943.1| cytidine deaminase [Lactobacillus casei UCD174]
Length = 129
Score = 92.8 bits (229), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 47/97 (48%), Positives = 64/97 (65%), Gaps = 4/97 (4%)
Query: 19 LANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISE 78
L ++ AR+NAY PYS VGAA+ D IF+G NVENASY ++ CAE++AI A+S
Sbjct: 4 LRTAALAARENAYVPYSHFAVGAAVRV-GDRIFSGANVENASYSLSNCAERSAIFAAVSA 62
Query: 79 GQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSP 115
G +K + V + D+ V+PCG+CRQVI+EF P
Sbjct: 63 GYSKLDELLV---IADTKGPVAPCGACRQVISEFFGP 96
>gi|255939506|ref|XP_002560522.1| Pc16g01040 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211585145|emb|CAP92774.1| Pc16g01040 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 164
Score = 92.8 bits (229), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 60/106 (56%), Gaps = 6/106 (5%)
Query: 17 QNLANLS---IQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAIS 73
Q L LS I A+ AYCPYSK +VGA +L TG NVENASY + CAE+ I
Sbjct: 8 QELTTLSTKAIDAKATAYCPYSKFRVGACILTASGEFITGANVENASYPVGTCAERVTIG 67
Query: 74 KAISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDI 119
AI G FK +AV+ D SPCG CRQ I EF+SP+ +
Sbjct: 68 AAIVAGHRDFKALAVAT---DIKPAASPCGMCRQFIREFTSPSFPV 110
>gi|407795577|ref|ZP_11142535.1| cytidine deaminase [Salimicrobium sp. MJ3]
gi|407019918|gb|EKE32632.1| cytidine deaminase [Salimicrobium sp. MJ3]
Length = 133
Score = 92.8 bits (229), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 43/95 (45%), Positives = 64/95 (67%), Gaps = 3/95 (3%)
Query: 18 NLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAIS 77
L +I R AY PYS+ VGAA+L + ++ G N+ENA+Y + CAE+ AI KA++
Sbjct: 6 ELIQKAIDIRKRAYVPYSEFPVGAAVLTKSGEVYEGVNIENAAYPTSCCAERVAIFKAVA 65
Query: 78 EGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEF 112
+G F+ +AV+A D+++ V PCGSCRQV++EF
Sbjct: 66 DGHYDFETLAVTA---DTDRPVPPCGSCRQVMSEF 97
>gi|182414472|ref|YP_001819538.1| cytidine deaminase [Opitutus terrae PB90-1]
gi|177841686|gb|ACB75938.1| cytidine deaminase [Opitutus terrae PB90-1]
Length = 135
Score = 92.8 bits (229), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 50/107 (46%), Positives = 65/107 (60%), Gaps = 3/107 (2%)
Query: 15 IEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISK 74
+ + L + +A + +Y PYSK VGAA+L +FTGCNVENASYG+ CAE+TAI
Sbjct: 7 VRRRLEKAARRAAEASYSPYSKFPVGAAVLTSSGHVFTGCNVENASYGLCNCAERTAIFS 66
Query: 75 AISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQV 121
A + G+ K +AV P + SPCG+CRQVI EF A I V
Sbjct: 67 AAAAGERAIKAVAVYTPTPTAT---SPCGACRQVINEFGPTALVISV 110
>gi|262039432|ref|ZP_06012738.1| cytidine deaminase [Leptotrichia goodfellowii F0264]
gi|261746544|gb|EEY34077.1| cytidine deaminase [Leptotrichia goodfellowii F0264]
Length = 142
Score = 92.8 bits (229), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 47/103 (45%), Positives = 64/103 (62%), Gaps = 7/103 (6%)
Query: 28 DNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQTKFKRIA 87
D AY PYSK V A L+ Q+ F G NVENASYG+ ICAE+ I A++EG K K +
Sbjct: 27 DRAYVPYSKFPVAALLIDQNGKKFKGVNVENASYGVGICAERNVIPTAVTEGMKKIKLLV 86
Query: 88 VSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQ 130
V+ P+ +SPCG+CRQ I+EFS D +I+ ++R +
Sbjct: 87 VTGGTPEP---ISPCGACRQFISEFS----DKDTVIILTNRDK 122
>gi|405354370|ref|ZP_11023750.1| Cytidine deaminase [Chondromyces apiculatus DSM 436]
gi|397092613|gb|EJJ23371.1| Cytidine deaminase [Myxococcus sp. (contaminant ex DSM 436)]
Length = 134
Score = 92.4 bits (228), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 49/116 (42%), Positives = 71/116 (61%), Gaps = 8/116 (6%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
+ L + + R A+ PYS+ VGAA+L D + GCNVENA+YG+T+CAE+ A + +
Sbjct: 8 ERLFEEAARVRARAHVPYSRFPVGAAILYADGAVVAGCNVENATYGLTVCAERNAFAAGV 67
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQVG 132
++G T + +AV AI+ D+ + PCG CRQV+AEF Q L V+S Q G
Sbjct: 68 AQGHT--QPVAV-AIVVDTPQPCPPCGMCRQVMAEFGG-----QELPVRSRTPQGG 115
>gi|332685761|ref|YP_004455535.1| cytidine deaminase [Melissococcus plutonius ATCC 35311]
gi|332369770|dbj|BAK20726.1| cytidine deaminase [Melissococcus plutonius ATCC 35311]
Length = 130
Score = 92.4 bits (228), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 46/103 (44%), Positives = 69/103 (66%), Gaps = 5/103 (4%)
Query: 22 LSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQT 81
L++ A AY PYS VGA L+ +++ + G N+ENASYG+T CAE+TAI KA+SEG+
Sbjct: 9 LAMTAMQKAYVPYSNFPVGACLITKNEKTYLGKNIENASYGLTNCAERTAIFKAVSEGER 68
Query: 82 KFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIV 124
F+ + ++ + + PCG+CRQV+ EF SP D+ V++V
Sbjct: 69 DFQCLVIAG---QTAAPIVPCGACRQVMIEFFSP--DMPVILV 106
>gi|293376338|ref|ZP_06622575.1| cytidine deaminase [Turicibacter sanguinis PC909]
gi|292645027|gb|EFF63100.1| cytidine deaminase [Turicibacter sanguinis PC909]
Length = 134
Score = 92.4 bits (228), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 47/112 (41%), Positives = 76/112 (67%), Gaps = 4/112 (3%)
Query: 25 QARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQTKFK 84
+A NAY PYSK VGAAL +D +I G NVENAS+G+T CAE++A+ A ++G +
Sbjct: 14 EAYQNAYVPYSKFPVGAALKLKDGSIINGANVENASFGLTNCAERSALFTAFTKGYRR-D 72
Query: 85 RIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQVGLITI 136
I A++ ++++ +SPCG+CRQVI+E D QV+++ S++ ++ + T+
Sbjct: 73 DIEAIAVVANTDRPISPCGACRQVISELMPQ--DAQVILL-SNKDEIKIYTV 121
>gi|159117933|ref|XP_001709186.1| Cytidine deaminase [Giardia lamblia ATCC 50803]
gi|157437301|gb|EDO81512.1| Cytidine deaminase [Giardia lamblia ATCC 50803]
Length = 134
Score = 92.4 bits (228), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 48/119 (40%), Positives = 73/119 (61%), Gaps = 8/119 (6%)
Query: 19 LANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISE 78
L +I+ ++AY PYSK +VGAA+L + IF GCNVENA+Y + +CAE+TA+ KAISE
Sbjct: 11 LIKAAIEGSEHAYIPYSKYKVGAAILTESGEIFKGCNVENAAYPIGVCAERTAVVKAISE 70
Query: 79 GQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQVGLITID 137
G+ +A + + D SPCG CRQ + EF+ + +++ K D + + +D
Sbjct: 71 GKKDM--VACAVVTRDGG---SPCGMCRQTLNEFNP---KMHMILAKLDGEVITEMPLD 121
>gi|403667304|ref|ZP_10932617.1| cytidine deaminase [Kurthia sp. JC8E]
Length = 132
Score = 92.4 bits (228), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 52/121 (42%), Positives = 70/121 (57%), Gaps = 8/121 (6%)
Query: 18 NLANLSIQARD---NAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISK 74
N L +AR N Y PYS+ V AALL +D T+ G NVEN S+G T CAE+TAI
Sbjct: 2 NKEQLMTEARSVLTNTYSPYSQFPVAAALLLKDGTVIKGVNVENVSFGATNCAERTAIFT 61
Query: 75 AISEGQTK--FKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQVG 132
AI+ G K F+ IAV+ D++ F+ PC CRQV+AEF P+ + + D ++
Sbjct: 62 AITNGYKKGDFEAIAVAG---DTDDFLPPCSICRQVMAEFFEPSMPVYLTNKAGDIKELA 118
Query: 133 L 133
L
Sbjct: 119 L 119
>gi|291526509|emb|CBK92096.1| cytidine deaminase [Eubacterium rectale DSM 17629]
Length = 139
Score = 92.4 bits (228), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 72/124 (58%), Gaps = 3/124 (2%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
+ L + ++ D +Y PYS VGAALL ++ ++TGCN+ENA+Y T CAE+TA KA+
Sbjct: 7 EKLIDTALAQLDFSYAPYSGFNVGAALLAKNQAVYTGCNIENAAYTPTNCAERTAFFKAV 66
Query: 77 SEGQTKFKRIA-VSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQVGLIT 135
SEG F+ I V + +PCG CRQV+ EF +P +L + DR + T
Sbjct: 67 SEGVRDFEAICIVGGKNQKPTGYTAPCGVCRQVMMEFCNPKTFKIILAI--DRENYRVYT 124
Query: 136 IDGM 139
++ M
Sbjct: 125 LEDM 128
>gi|402715868|gb|AFQ93718.1| putative alkaline protease, partial [haloalkaliphilic bacterium
Ve2-20-91]
Length = 138
Score = 92.4 bits (228), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 45/94 (47%), Positives = 63/94 (67%), Gaps = 3/94 (3%)
Query: 15 IEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISK 74
+++ L +IQ R AY PYS+ VGAALL I+TGCN+ENA+Y T CAE+ AI K
Sbjct: 42 MKEKLLEEAIQIRARAYVPYSEFPVGAALLTSSGNIYTGCNIENAAYPSTCCAERVAIFK 101
Query: 75 AISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQV 108
AIS+G+T+F +AV+A D+ + V PC +C +
Sbjct: 102 AISDGETEFTEMAVAA---DTKRPVPPCWTCNTI 132
>gi|222479370|ref|YP_002565607.1| cytidine deaminase [Halorubrum lacusprofundi ATCC 49239]
gi|222452272|gb|ACM56537.1| cytidine deaminase [Halorubrum lacusprofundi ATCC 49239]
Length = 133
Score = 92.4 bits (228), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 67/97 (69%), Gaps = 3/97 (3%)
Query: 18 NLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAIS 77
+L + A D+A+ PYS+ +VGAAL D T++TGCN+ENA+Y ++ AE+ A+++A+
Sbjct: 2 DLIEAARDALDDAHVPYSEYRVGAALRTADGTVYTGCNIENANYSNSLHAEEVALAEAVK 61
Query: 78 EGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSS 114
G +F RIAV++ + D V+PCG CRQ + EF++
Sbjct: 62 NGHREFDRIAVTSGVRDG---VTPCGMCRQSLTEFAA 95
>gi|374673462|dbj|BAL51353.1| cytidine deaminase [Lactococcus lactis subsp. lactis IO-1]
Length = 130
Score = 92.4 bits (228), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 49/98 (50%), Positives = 64/98 (65%), Gaps = 5/98 (5%)
Query: 31 YCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQTKFKRIAVSA 90
Y PYS VGAA D I TGCN+ENAS+G++ CAE+TAI KAISEG F + V
Sbjct: 19 YVPYSHFPVGAAFHTTDGRIITGCNIENASFGLSNCAERTAIFKAISEGLKDFDALYV-- 76
Query: 91 ILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDR 128
++ + +SPCG+CRQVIAEF PA D+ V ++ +
Sbjct: 77 -FGETEEPISPCGACRQVIAEF-CPA-DMPVFLISKNE 111
>gi|452207249|ref|YP_007487371.1| cytidine deaminase [Natronomonas moolapensis 8.8.11]
gi|452083349|emb|CCQ36639.1| cytidine deaminase [Natronomonas moolapensis 8.8.11]
Length = 130
Score = 92.4 bits (228), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 48/109 (44%), Positives = 70/109 (64%), Gaps = 7/109 (6%)
Query: 16 EQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKA 75
+ L +L+ +A + +Y PYS+ VGAA+ D T FTGCNVENA+Y ++ AE+ A+SKA
Sbjct: 3 DTELLSLAREAVERSYAPYSEYYVGAAIETGDGTTFTGCNVENANYSNSVHAEELALSKA 62
Query: 76 ISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIV 124
++ G F+ +AVS+ D V+PCG CRQ +AEF CD + +V
Sbjct: 63 VAAGHRGFEAVAVSS---DRRDGVTPCGMCRQSLAEF----CDDGLRVV 104
>gi|199599320|ref|ZP_03212718.1| Cytidine deaminase [Lactobacillus rhamnosus HN001]
gi|229552356|ref|ZP_04441081.1| cytidine deaminase [Lactobacillus rhamnosus LMS2-1]
gi|385828208|ref|YP_005865980.1| cytidine deaminase [Lactobacillus rhamnosus GG]
gi|421768699|ref|ZP_16205409.1| Cytidine deaminase [Lactobacillus rhamnosus LRHMDP2]
gi|421771150|ref|ZP_16207811.1| Cytidine deaminase [Lactobacillus rhamnosus LRHMDP3]
gi|423078916|ref|ZP_17067592.1| cytidine deaminase [Lactobacillus rhamnosus ATCC 21052]
gi|199589759|gb|EDY97867.1| Cytidine deaminase [Lactobacillus rhamnosus HN001]
gi|229314338|gb|EEN80311.1| cytidine deaminase [Lactobacillus rhamnosus LMS2-1]
gi|259649853|dbj|BAI42015.1| cytidine deaminase [Lactobacillus rhamnosus GG]
gi|357548819|gb|EHJ30678.1| cytidine deaminase [Lactobacillus rhamnosus ATCC 21052]
gi|411185548|gb|EKS52675.1| Cytidine deaminase [Lactobacillus rhamnosus LRHMDP2]
gi|411186585|gb|EKS53709.1| Cytidine deaminase [Lactobacillus rhamnosus LRHMDP3]
Length = 130
Score = 92.4 bits (228), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 48/112 (42%), Positives = 71/112 (63%), Gaps = 4/112 (3%)
Query: 19 LANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISE 78
L ++ AR+NAY PYS VGAA+ + IF+G N+ENASYG++ CAE++AI A+S
Sbjct: 5 LRTAALAARENAYVPYSHFAVGAAVRV-GERIFSGANIENASYGLSNCAERSAIFAAVSA 63
Query: 79 GQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQ 130
G T+ + V + D+ V+PCG+CRQVI+EF + I + V+ + Q
Sbjct: 64 GYTQLDELLV---IADTKGPVAPCGACRQVISEFFAADAVITLTNVRGETVQ 112
>gi|315645983|ref|ZP_07899104.1| cytidine deaminase [Paenibacillus vortex V453]
gi|315278744|gb|EFU42058.1| cytidine deaminase [Paenibacillus vortex V453]
Length = 137
Score = 92.4 bits (228), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 50/105 (47%), Positives = 67/105 (63%), Gaps = 3/105 (2%)
Query: 19 LANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISE 78
L +I+AR AY PYSK VGAALL + GCNVENA+YG T CAE+TA+ +AI++
Sbjct: 6 LMQEAIKARTRAYIPYSKFGVGAALLDAHGEVHHGCNVENAAYGPTNCAERTALFRAIAD 65
Query: 79 GQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLI 123
G A+ AI+ D+ SPCG CRQV+ E P D++V++
Sbjct: 66 GHEAGSFQAI-AIVADTEGPCSPCGVCRQVLVELCKP--DMKVIM 107
>gi|379005407|ref|YP_005261079.1| cytidine deaminase [Pyrobaculum oguniense TE7]
gi|375160860|gb|AFA40472.1| cytidine deaminase, homotetrameric [Pyrobaculum oguniense TE7]
Length = 127
Score = 92.4 bits (228), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 45/103 (43%), Positives = 66/103 (64%), Gaps = 8/103 (7%)
Query: 28 DNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQTKFKRIA 87
+NAY PYS +V A + + ++TG N+ENASYG+T+CAE+ A+ KA+SEG + I
Sbjct: 13 NNAYAPYSNFKVAAVVKTKSGKVYTGVNIENASYGLTVCAERVAVFKAVSEGD---RDID 69
Query: 88 VSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQ 130
+ D+++ PCG+CRQVIAEF+ A LIV + R +
Sbjct: 70 TVVVYTDTDEPTPPCGACRQVIAEFNPNA-----LIVMAGRKK 107
>gi|302872223|ref|YP_003840859.1| cytidine deaminase [Caldicellulosiruptor obsidiansis OB47]
gi|302575082|gb|ADL42873.1| cytidine deaminase [Caldicellulosiruptor obsidiansis OB47]
Length = 138
Score = 92.4 bits (228), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 47/92 (51%), Positives = 67/92 (72%), Gaps = 3/92 (3%)
Query: 22 LSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQT 81
L+ +A+ AY PYS +VGAA + ++TGCNVENASY +++CAE+ AI KAISEG++
Sbjct: 17 LAKEAQKKAYAPYSCFKVGAAAVGNSSKVYTGCNVENASYPLSMCAERIAIFKAISEGES 76
Query: 82 KFKRIAVSAILPDSNKFVSPCGSCRQVIAEFS 113
+ K A+ I P+ N+ +SPCG+CRQVI E +
Sbjct: 77 EIK--ALYIIGPE-NEPISPCGACRQVIFELA 105
>gi|195114352|ref|XP_002001731.1| GI17011 [Drosophila mojavensis]
gi|193912306|gb|EDW11173.1| GI17011 [Drosophila mojavensis]
Length = 220
Score = 92.0 bits (227), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 53/121 (43%), Positives = 69/121 (57%), Gaps = 4/121 (3%)
Query: 9 FSALDPIEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAE 68
FS LD + L ++ AR AY PYS +VGAA +D +FTGCNVENA+ CAE
Sbjct: 76 FSQLDNCGRELLEDALNARCFAYAPYSNFKVGAAFRSKDGKVFTGCNVENAALTPGCCAE 135
Query: 69 KTAISKAISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDR 128
+TA+ K ISEG F AV A P F +PCG CRQ + EF+ D+ + I ++
Sbjct: 136 RTAMLKGISEGCRAFSAGAVVAYHPAG--FTTPCGVCRQFMNEFAK--LDVPIYIAQAPE 191
Query: 129 S 129
S
Sbjct: 192 S 192
>gi|448488419|ref|ZP_21607255.1| cytidine deaminase [Halorubrum californiensis DSM 19288]
gi|445696109|gb|ELZ48202.1| cytidine deaminase [Halorubrum californiensis DSM 19288]
Length = 143
Score = 92.0 bits (227), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 44/93 (47%), Positives = 65/93 (69%), Gaps = 7/93 (7%)
Query: 30 AYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQTKFKRIAVS 89
A+ PYS+ +VGAAL D T++TGCN+ENA+Y ++ AE+ A+++A+ G +F RIAVS
Sbjct: 15 AHVPYSEYRVGAALRTADGTVYTGCNIENANYSNSLHAEEVALAEAVKNGHREFDRIAVS 74
Query: 90 AILPDSNKFVSPCGSCRQVIAEFSSP----ACD 118
+ + D V+PCG CRQ +AEF++ ACD
Sbjct: 75 SGVRDG---VTPCGMCRQSLAEFAADDLVVACD 104
>gi|258508546|ref|YP_003171297.1| cytidine deaminase [Lactobacillus rhamnosus GG]
gi|258539727|ref|YP_003174226.1| cytidine deaminase [Lactobacillus rhamnosus Lc 705]
gi|385835376|ref|YP_005873150.1| cytidine deaminase [Lactobacillus rhamnosus ATCC 8530]
gi|418070732|ref|ZP_12708007.1| cytidine deaminase [Lactobacillus rhamnosus R0011]
gi|257148473|emb|CAR87446.1| Cytidine deaminase [Lactobacillus rhamnosus GG]
gi|257151403|emb|CAR90375.1| Cytidine deaminase [Lactobacillus rhamnosus Lc 705]
gi|355394867|gb|AER64297.1| cytidine deaminase [Lactobacillus rhamnosus ATCC 8530]
gi|357540152|gb|EHJ24169.1| cytidine deaminase [Lactobacillus rhamnosus R0011]
Length = 129
Score = 92.0 bits (227), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 48/112 (42%), Positives = 71/112 (63%), Gaps = 4/112 (3%)
Query: 19 LANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISE 78
L ++ AR+NAY PYS VGAA+ + IF+G N+ENASYG++ CAE++AI A+S
Sbjct: 4 LRTAALAARENAYVPYSHFAVGAAVRV-GERIFSGANIENASYGLSNCAERSAIFAAVSA 62
Query: 79 GQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQ 130
G T+ + V + D+ V+PCG+CRQVI+EF + I + V+ + Q
Sbjct: 63 GYTQLDELLV---IADTKGPVAPCGACRQVISEFFAADAVITLTNVRGETVQ 111
>gi|145590312|ref|YP_001152314.1| cytidine deaminase [Pyrobaculum arsenaticum DSM 13514]
gi|145282080|gb|ABP49662.1| cytidine deaminase [Pyrobaculum arsenaticum DSM 13514]
Length = 127
Score = 92.0 bits (227), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 45/103 (43%), Positives = 66/103 (64%), Gaps = 8/103 (7%)
Query: 28 DNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQTKFKRIA 87
+NAY PYS +V A + + ++TG N+ENASYG+T+CAE+ A+ KA+SEG + I
Sbjct: 13 NNAYAPYSSFKVAAVVKTKSGKVYTGVNIENASYGLTVCAERVAVFKAVSEGD---RDID 69
Query: 88 VSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQ 130
+ D+++ PCG+CRQVIAEF+ A LIV + R +
Sbjct: 70 TVVVYTDTDEPTPPCGACRQVIAEFNPNA-----LIVMAGRKK 107
>gi|393763619|ref|ZP_10352236.1| cytidine deaminase [Alishewanella agri BL06]
gi|392605387|gb|EIW88281.1| cytidine deaminase [Alishewanella agri BL06]
Length = 163
Score = 92.0 bits (227), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 44/83 (53%), Positives = 55/83 (66%), Gaps = 3/83 (3%)
Query: 33 PYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQTKFKRIAVSAIL 92
PYS+ VG A+L ++ IFTGCNVENASYG T+CAE+ AI+ A+ GQ +F+ + V
Sbjct: 43 PYSQFPVGVAVLAENGQIFTGCNVENASYGGTVCAERNAIAAAVVAGQRRFQALMVYT-- 100
Query: 93 PDSNKFVSPCGSCRQVIAEFSSP 115
K PCG CRQVIAEF P
Sbjct: 101 -PQTKLTPPCGICRQVIAEFFLP 122
>gi|302380578|ref|ZP_07269043.1| cytidine deaminase [Finegoldia magna ACS-171-V-Col3]
gi|417925950|ref|ZP_12569363.1| cytidine deaminase [Finegoldia magna SY403409CC001050417]
gi|302311521|gb|EFK93537.1| cytidine deaminase [Finegoldia magna ACS-171-V-Col3]
gi|341590552|gb|EGS33790.1| cytidine deaminase [Finegoldia magna SY403409CC001050417]
Length = 131
Score = 92.0 bits (227), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 49/110 (44%), Positives = 70/110 (63%), Gaps = 6/110 (5%)
Query: 19 LANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISE 78
+ +++Q + NAY PYS VG + D F GCN+ENAS+ TICAE+TAISK +SE
Sbjct: 6 MYKIALQYKQNAYTPYSNYNVGCCVKDTDGNYFGGCNIENASFSPTICAERTAISKMVSE 65
Query: 79 GQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDR 128
G K I I+ DS+ F PCG CRQVI EFS+ D ++++ ++++
Sbjct: 66 G---CKLIDTILIIGDSD-FTYPCGVCRQVIKEFSNE--DTRIIVARNEK 109
>gi|225873336|ref|YP_002754795.1| cytidine deaminase [Acidobacterium capsulatum ATCC 51196]
gi|225794251|gb|ACO34341.1| cytidine deaminase [Acidobacterium capsulatum ATCC 51196]
Length = 137
Score = 92.0 bits (227), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 47/96 (48%), Positives = 62/96 (64%), Gaps = 1/96 (1%)
Query: 19 LANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISE 78
L L+ +A AY PYS+ QVGAALL D TGCNVEN SYG+T CAE+ A+ +AISE
Sbjct: 11 LRTLAEEAAKLAYAPYSRFQVGAALLLDDGRTVTGCNVENLSYGLTSCAERNAVFRAISE 70
Query: 79 GQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSS 114
K +A+ A+ +PCG+CRQV+ EF++
Sbjct: 71 RGPAAKIVAI-AVTNMRGTMCAPCGACRQVLHEFAA 105
>gi|402313031|ref|ZP_10831953.1| cytidine deaminase [Lachnospiraceae bacterium ICM7]
gi|400367070|gb|EJP20088.1| cytidine deaminase [Lachnospiraceae bacterium ICM7]
Length = 136
Score = 92.0 bits (227), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 50/115 (43%), Positives = 71/115 (61%), Gaps = 5/115 (4%)
Query: 25 QARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQTKFK 84
+AR AY PYSK +VGAAL+ + I GCN+ENA+Y CAE+TA KA+SEG F
Sbjct: 12 KARKMAYVPYSKYKVGAALMTKSGKIIHGCNIENAAYTPCNCAERTAFFKAVSEGIYDFC 71
Query: 85 RIAVSAIL--PDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQVGLITID 137
+IAV D++ +PCG CRQV+ EF +P + IV SD +++ + ++
Sbjct: 72 KIAVVGGFEDKDADALCTPCGVCRQVMQEFCNPK---EFEIVMSDGAKIKNMKLE 123
>gi|383936214|ref|ZP_09989643.1| cytidine deaminase [Rheinheimera nanhaiensis E407-8]
gi|383702776|dbj|GAB59734.1| cytidine deaminase [Rheinheimera nanhaiensis E407-8]
Length = 141
Score = 92.0 bits (227), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 44/83 (53%), Positives = 55/83 (66%), Gaps = 3/83 (3%)
Query: 33 PYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQTKFKRIAVSAIL 92
PYS+ VG A+L + I+TGCNVENASYG T+CAE+ AI+ A+ G+ KF+ + V
Sbjct: 23 PYSQFPVGVAVLAESGNIYTGCNVENASYGGTVCAERNAIAAAVVAGERKFRALLVYTPQ 82
Query: 93 PDSNKFVSPCGSCRQVIAEFSSP 115
P PCG CRQVIAEF SP
Sbjct: 83 P---ALTPPCGICRQVIAEFFSP 102
>gi|303233695|ref|ZP_07320349.1| cytidine deaminase [Finegoldia magna BVS033A4]
gi|302495129|gb|EFL54881.1| cytidine deaminase [Finegoldia magna BVS033A4]
Length = 131
Score = 92.0 bits (227), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 49/110 (44%), Positives = 70/110 (63%), Gaps = 6/110 (5%)
Query: 19 LANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISE 78
+ +++Q + NAY PYS VG + D F GCN+ENAS+ TICAE+TAISK +SE
Sbjct: 6 MYKIALQYKQNAYTPYSNYNVGCCVKDTDGNYFGGCNIENASFSPTICAERTAISKMVSE 65
Query: 79 GQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDR 128
G K I I+ DS+ F PCG CRQVI EFS+ D ++++ ++++
Sbjct: 66 G---CKLIDTILIIGDSD-FTYPCGVCRQVIKEFSNE--DTRIIVARNEK 109
>gi|397171572|ref|ZP_10494974.1| cytidine deaminase [Alishewanella aestuarii B11]
gi|396086861|gb|EJI84469.1| cytidine deaminase [Alishewanella aestuarii B11]
Length = 143
Score = 92.0 bits (227), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 44/83 (53%), Positives = 55/83 (66%), Gaps = 3/83 (3%)
Query: 33 PYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQTKFKRIAVSAIL 92
PYS+ VG A+L ++ IFTGCNVENASYG T+CAE+ AI+ A+ GQ +F+ + V
Sbjct: 23 PYSQFPVGVAVLAENGQIFTGCNVENASYGGTVCAERNAIAAAVVAGQRRFQALMVYT-- 80
Query: 93 PDSNKFVSPCGSCRQVIAEFSSP 115
K PCG CRQVIAEF P
Sbjct: 81 -PQTKLTPPCGICRQVIAEFFLP 102
>gi|389847093|ref|YP_006349332.1| cytidine deaminase [Haloferax mediterranei ATCC 33500]
gi|448614958|ref|ZP_21663986.1| cytidine deaminase [Haloferax mediterranei ATCC 33500]
gi|388244399|gb|AFK19345.1| cytidine deaminase [Haloferax mediterranei ATCC 33500]
gi|445753045|gb|EMA04464.1| cytidine deaminase [Haloferax mediterranei ATCC 33500]
Length = 140
Score = 92.0 bits (227), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 45/108 (41%), Positives = 68/108 (62%), Gaps = 7/108 (6%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
+ L + +A DNAY PYS+ VGAAL D ++ GCN+ENA+Y ++ AE+ AI++A+
Sbjct: 3 EPLVERAREALDNAYVPYSEYTVGAALETPDSEVYVGCNIENANYSNSLHAEEVAIAEAV 62
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIV 124
G T+F R+ V++ D V+PCG CRQ +AEF CD + ++
Sbjct: 63 KNGHTEFTRLVVTSGARDG---VTPCGMCRQTLAEF----CDEDLPVI 103
>gi|448500871|ref|ZP_21611958.1| cytidine deaminase [Halorubrum coriense DSM 10284]
gi|445695858|gb|ELZ47956.1| cytidine deaminase [Halorubrum coriense DSM 10284]
Length = 134
Score = 92.0 bits (227), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 43/92 (46%), Positives = 65/92 (70%), Gaps = 7/92 (7%)
Query: 31 YCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQTKFKRIAVSA 90
+ PYS+ +VGAAL D T++TGCN+ENA+Y ++ AE+ A+++A+ +G +F RIAVS+
Sbjct: 16 HVPYSEYRVGAALRTADGTVYTGCNIENANYSNSLHAEEVALAEAVKDGHREFDRIAVSS 75
Query: 91 ILPDSNKFVSPCGSCRQVIAEFSSP----ACD 118
+ D V+PCG CRQ +AEF++ ACD
Sbjct: 76 GVRDG---VTPCGMCRQTLAEFAADDLVVACD 104
>gi|389861139|ref|YP_006363379.1| cytidine deaminase [Thermogladius cellulolyticus 1633]
gi|388526043|gb|AFK51241.1| cytidine deaminase [Thermogladius cellulolyticus 1633]
Length = 129
Score = 92.0 bits (227), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 46/104 (44%), Positives = 71/104 (68%), Gaps = 4/104 (3%)
Query: 29 NAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQTKFKRIAV 88
++Y PYS + V AA+L I+ G NVEN+SYG+TICAE++AIS ++ G+ +R
Sbjct: 14 HSYAPYSGVHVAAAVLTDKGNIYRGVNVENSSYGLTICAERSAISAMVTAGE---RRPVA 70
Query: 89 SAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQVG 132
AI+ D ++ + PCG+CRQVIAEF+S A ++ + VK+ ++ V
Sbjct: 71 IAIVTDMDEPIPPCGACRQVIAEFNSEA-EVVMHSVKTGKTVVA 113
>gi|88800950|ref|ZP_01116502.1| cytidine deaminase [Reinekea blandensis MED297]
gi|88776325|gb|EAR07548.1| cytidine deaminase [Reinekea sp. MED297]
Length = 133
Score = 92.0 bits (227), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 44/97 (45%), Positives = 64/97 (65%), Gaps = 1/97 (1%)
Query: 16 EQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKA 75
+++L L+ Q + AY PYS+ VGA+L + F GCN+EN+SYG+ ICAE+TAI+ A
Sbjct: 5 KKDLHALAQQGAEKAYAPYSQFPVGASLRTRTGETFIGCNIENSSYGLGICAERTAIAAA 64
Query: 76 ISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEF 112
++ G ++ +PD N SPCG+CRQVI+EF
Sbjct: 65 VTAGFGPGDIEEMAVYVPDEN-IASPCGACRQVISEF 100
>gi|408355622|ref|YP_006844153.1| cytidine deaminase [Amphibacillus xylanus NBRC 15112]
gi|407726393|dbj|BAM46391.1| cytidine deaminase [Amphibacillus xylanus NBRC 15112]
Length = 140
Score = 91.7 bits (226), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 46/96 (47%), Positives = 64/96 (66%), Gaps = 3/96 (3%)
Query: 19 LANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISE 78
L N + AR+ AY PYSK +VGAAL+ ++ I+ GCNVENA+Y + CAE+TA+ A +
Sbjct: 5 LINEAKLAREKAYTPYSKFKVGAALMTKNGAIYHGCNVENAAYSLCNCAERTALFSAYAA 64
Query: 79 GQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSS 114
G+ F + V A DS + V PCG+CRQV++E S
Sbjct: 65 GERDFTAMVVIA---DSPRPVPPCGACRQVMSELCS 97
>gi|312135528|ref|YP_004002866.1| cytidine deaminase [Caldicellulosiruptor owensensis OL]
gi|311775579|gb|ADQ05066.1| cytidine deaminase [Caldicellulosiruptor owensensis OL]
Length = 138
Score = 91.7 bits (226), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 46/92 (50%), Positives = 67/92 (72%), Gaps = 3/92 (3%)
Query: 22 LSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQT 81
L+ +A+ AY PYS +VGAA + ++TGCNVENASY +++CAE+ A+ KAISEG++
Sbjct: 17 LAQEAQKKAYAPYSCFKVGAAAVGNSSKVYTGCNVENASYSLSMCAERIALFKAISEGES 76
Query: 82 KFKRIAVSAILPDSNKFVSPCGSCRQVIAEFS 113
+ K A+ I P+ N+ +SPCG+CRQVI E +
Sbjct: 77 EIK--ALYIIGPE-NEPISPCGACRQVIFELA 105
>gi|266619311|ref|ZP_06112246.1| cytidine deaminase [Clostridium hathewayi DSM 13479]
gi|288869146|gb|EFD01445.1| cytidine deaminase [Clostridium hathewayi DSM 13479]
Length = 170
Score = 91.7 bits (226), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 55/135 (40%), Positives = 78/135 (57%), Gaps = 11/135 (8%)
Query: 8 EFSALD---PIEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMT 64
E +AL P+E+ L + + A AY PYS QVGAALL D I+ GCN+ENA+Y +
Sbjct: 27 ELAALKEKLPVEE-LISQAFSAMAKAYTPYSGFQVGAALLTADGVIYQGCNIENAAYTPS 85
Query: 65 ICAEKTAISKAISEGQTKFKRIAVSA---ILPDSNKFVSPCGSCRQVIAEFSSPACDIQV 121
CAE+TA KA+SEG +F+ I + +P +PCG CRQV+ EF P +
Sbjct: 86 NCAERTAFFKAVSEGVREFQAICIVGGKDGIPSG--LTAPCGVCRQVMMEFCDP--ETFQ 141
Query: 122 LIVKSDRSQVGLITI 136
+I+ S R + + T+
Sbjct: 142 IILPSGREEYEIYTL 156
>gi|354582241|ref|ZP_09001143.1| cytidine deaminase [Paenibacillus lactis 154]
gi|353199640|gb|EHB65102.1| cytidine deaminase [Paenibacillus lactis 154]
Length = 135
Score = 91.7 bits (226), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 51/111 (45%), Positives = 67/111 (60%), Gaps = 5/111 (4%)
Query: 19 LANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISE 78
L +I+AR AY PYSK VGAALL + GCNVENA+YG T CAE+TA+ +AI++
Sbjct: 6 LMQEAIKARTRAYIPYSKFGVGAALLDTGGKVHHGCNVENAAYGPTNCAERTALFRAIAD 65
Query: 79 GQT--KFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSD 127
G FK IA+ A D+ +PCG CRQV+ E P + + +K D
Sbjct: 66 GHEPGSFKAIAIVA---DTEGPCTPCGVCRQVLVELCKPDMTVILGNMKGD 113
>gi|453089012|gb|EMF17052.1| cytidine deaminase [Mycosphaerella populorum SO2202]
Length = 159
Score = 91.7 bits (226), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 49/117 (41%), Positives = 65/117 (55%), Gaps = 1/117 (0%)
Query: 4 HDIMEFSALDPIE-QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYG 62
HD L E Q L+ ++A+ AYCPYS +VGAALL + + TG NVENA+Y
Sbjct: 14 HDTALIHGLSQAEVQKLSASCVEAKSRAYCPYSNFRVGAALLLKSGEVVTGANVENAAYP 73
Query: 63 MTICAEKTAISKAISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDI 119
+ CAE+TAI A+ + + I A+ D + SPCG CRQ I EF P+ I
Sbjct: 74 VGTCAERTAIGTAVVQHRAARGDIRAIAVATDISPPASPCGMCRQFIREFCEPSTPI 130
>gi|448468617|ref|ZP_21599886.1| cytidine deaminase [Halorubrum kocurii JCM 14978]
gi|445810351|gb|EMA60377.1| cytidine deaminase [Halorubrum kocurii JCM 14978]
Length = 133
Score = 91.7 bits (226), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 40/86 (46%), Positives = 63/86 (73%), Gaps = 3/86 (3%)
Query: 29 NAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQTKFKRIAV 88
+A+ PYS+ +VGAAL D T++TGCN+ENA+Y ++ AE+ A+++A+ G +F RIAV
Sbjct: 13 DAHVPYSEYRVGAALRTADGTVYTGCNIENANYSNSLHAEEVALAEAVKNGHREFDRIAV 72
Query: 89 SAILPDSNKFVSPCGSCRQVIAEFSS 114
++ + D V+PCG CRQ +AEF++
Sbjct: 73 TSGVRDG---VTPCGMCRQTLAEFAA 95
>gi|391341960|ref|XP_003745292.1| PREDICTED: probable cytidine deaminase-like [Metaseiulus
occidentalis]
Length = 140
Score = 91.7 bits (226), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 46/97 (47%), Positives = 66/97 (68%), Gaps = 7/97 (7%)
Query: 25 QARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQTKFK 84
+A++N+Y PYSK++VGAA+L Q I +G NVE ASYG+ +CAE+ ++ A S G FK
Sbjct: 16 EAKENSYSPYSKVKVGAAVLTQCGKILSGANVECASYGLGVCAERGLLTHAASRGFRSFK 75
Query: 85 RIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQV 121
I V + LP+ ++PCG+CRQ I EF + DI+V
Sbjct: 76 TIVVVSNLPE----ITPCGACRQFIVEFGT---DIEV 105
>gi|315651701|ref|ZP_07904707.1| cytidine deaminase [Lachnoanaerobaculum saburreum DSM 3986]
gi|315486039|gb|EFU76415.1| cytidine deaminase [Lachnoanaerobaculum saburreum DSM 3986]
Length = 146
Score = 91.7 bits (226), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 48/101 (47%), Positives = 65/101 (64%), Gaps = 3/101 (2%)
Query: 25 QARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQTKFK 84
+AR AY PYSK +VGAALL + + GCN+ENA+Y CAE+TA KAISEG F
Sbjct: 21 KARKMAYVPYSKFKVGAALLTKSGKVIHGCNIENAAYTPCNCAERTAFFKAISEGIYDFC 80
Query: 85 RIAVSAILPDS--NKFVSPCGSCRQVIAEFSSPACDIQVLI 123
+IAV D+ + +PCG CRQV+ EF +P + ++L+
Sbjct: 81 KIAVVGSFEDADVDTICTPCGVCRQVMQEFCNPK-EFEILM 120
>gi|296111219|ref|YP_003621601.1| cytidine deaminase [Leuconostoc kimchii IMSNU 11154]
gi|339491505|ref|YP_004706010.1| cytidine deaminase [Leuconostoc sp. C2]
gi|295832751|gb|ADG40632.1| cytidine deaminase [Leuconostoc kimchii IMSNU 11154]
gi|338853177|gb|AEJ31387.1| cytidine deaminase [Leuconostoc sp. C2]
Length = 134
Score = 91.7 bits (226), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 42/106 (39%), Positives = 66/106 (62%), Gaps = 3/106 (2%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
L +++ A D+ Y PYS VGAALL + IF G N+EN S+G+T CAE+TAI A+
Sbjct: 9 HELVAVALAALDHTYTPYSHFPVGAALLTASNEIFKGVNIENVSFGLTNCAERTAIFSAV 68
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVL 122
+ +FK + ++ +++ ++PCG+CRQV+ EF P I ++
Sbjct: 69 AAENKQFKGLVIAG---HTDEPIAPCGACRQVMVEFFDPQMPIWLI 111
>gi|375110214|ref|ZP_09756445.1| cytidine deaminase [Alishewanella jeotgali KCTC 22429]
gi|374569658|gb|EHR40810.1| cytidine deaminase [Alishewanella jeotgali KCTC 22429]
Length = 143
Score = 91.7 bits (226), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 44/83 (53%), Positives = 55/83 (66%), Gaps = 3/83 (3%)
Query: 33 PYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQTKFKRIAVSAIL 92
PYS+ VG A+L ++ IFTGCNVENASYG T+CAE+ AI+ A+ GQ +F+ + V
Sbjct: 23 PYSQFPVGVAVLAENGQIFTGCNVENASYGGTVCAERNAIAAAVVAGQRRFQALMVYT-- 80
Query: 93 PDSNKFVSPCGSCRQVIAEFSSP 115
K PCG CRQVIAEF P
Sbjct: 81 -PQTKLTPPCGICRQVIAEFFLP 102
>gi|390933169|ref|YP_006390674.1| cytidine deaminase [Thermoanaerobacterium saccharolyticum
JW/SL-YS485]
gi|389568670|gb|AFK85075.1| cytidine deaminase [Thermoanaerobacterium saccharolyticum
JW/SL-YS485]
Length = 131
Score = 91.7 bits (226), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 45/107 (42%), Positives = 71/107 (66%), Gaps = 5/107 (4%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
+ L + + R++AY PYSK +VGA ++ ++ I+ GCN+EN+SYG+T CAE+TA+ A
Sbjct: 4 EKLLEAAKEVRESAYAPYSKFKVGACVVTKNGKIYKGCNIENSSYGLTNCAERTALFSAY 63
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLI 123
+ G + + IAV A D++ VSPCG+CRQV+ E D+ V++
Sbjct: 64 ANGDREIEAIAVVA---DTDGPVSPCGACRQVMYELGGE--DMTVIL 105
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.320 0.135 0.404
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,369,945,937
Number of Sequences: 23463169
Number of extensions: 80605552
Number of successful extensions: 162361
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 2460
Number of HSP's successfully gapped in prelim test: 608
Number of HSP's that attempted gapping in prelim test: 156756
Number of HSP's gapped (non-prelim): 3554
length of query: 166
length of database: 8,064,228,071
effective HSP length: 127
effective length of query: 39
effective length of database: 9,379,372,904
effective search space: 365795543256
effective search space used: 365795543256
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 71 (32.0 bits)