Your job contains 1 sequence.
>psy2494
MVGHDIMEFSALDPIEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENAS
YGMTICAEKTAISKAISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQ
VLIVKSDRSQVGLITIDGMYLTLHCCWERGNLVLPDPKLTISGNEL
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy2494
(166 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|E1BNY1 - symbol:CDA "Uncharacterized protein" s... 291 1.1e-25 1
UNIPROTKB|E2RBK6 - symbol:CDA "Uncharacterized protein" s... 289 1.8e-25 1
ZFIN|ZDB-GENE-040426-1911 - symbol:cda "cytidine deaminas... 288 2.2e-25 1
ZFIN|ZDB-GENE-041114-88 - symbol:zgc:103586 "zgc:103586" ... 286 3.6e-25 1
MGI|MGI:1919519 - symbol:Cda "cytidine deaminase" species... 284 5.9e-25 1
UNIPROTKB|I3LAH9 - symbol:CDA "Uncharacterized protein" s... 282 9.7e-25 1
RGD|1311101 - symbol:Cda "cytidine deaminase" species:101... 279 2.0e-24 1
FB|FBgn0032001 - symbol:CG8360 species:7227 "Drosophila m... 277 3.3e-24 1
UNIPROTKB|P32320 - symbol:CDA "Cytidine deaminase" specie... 276 4.2e-24 1
DICTYBASE|DDB_G0288933 - symbol:cda "cytidine deaminase" ... 270 1.8e-23 1
FB|FBgn0032002 - symbol:CG8353 species:7227 "Drosophila m... 270 1.8e-23 1
TIGR_CMR|BA_4525 - symbol:BA_4525 "cytidine deaminase" sp... 269 2.3e-23 1
TIGR_CMR|BA_1895 - symbol:BA_1895 "cytidine deaminase" sp... 268 2.9e-23 1
UNIPROTKB|E1C6V1 - symbol:CDA "Uncharacterized protein" s... 267 3.8e-23 1
WB|WBGene00000391 - symbol:cdd-1 species:6239 "Caenorhabd... 258 3.4e-22 1
WB|WBGene00000392 - symbol:cdd-2 species:6239 "Caenorhabd... 256 5.5e-22 1
UNIPROTKB|Q20628 - symbol:cdd-2 "Protein CDD-2" species:6... 256 5.5e-22 1
TIGR_CMR|CHY_1553 - symbol:CHY_1553 "cytidine deaminase" ... 255 7.0e-22 1
TIGR_CMR|CPS_1969 - symbol:CPS_1969 "cytidine deaminase" ... 249 3.0e-21 1
ASPGD|ASPL0000049793 - symbol:AN11146 species:162425 "Eme... 232 1.9e-19 1
FB|FBgn0032003 - symbol:CG8349 species:7227 "Drosophila m... 223 1.7e-18 1
POMBASE|SPAC1556.04c - symbol:cdd1 "cytidine deaminase Cc... 220 3.6e-18 1
TIGR_CMR|SPO_2930 - symbol:SPO_2930 "cytidine deaminase" ... 208 6.7e-17 1
SGD|S000004235 - symbol:CDD1 "Cytidine deaminase" species... 195 1.6e-15 1
UNIPROTKB|O53367 - symbol:cdd "Cytidine deaminase" specie... 186 1.4e-14 1
TAIR|locus:2134388 - symbol:AT4G29630 species:3702 "Arabi... 126 5.1e-08 1
UNIPROTKB|Q81PF4 - symbol:BAS2661 "Cytidine and deoxycyti... 124 5.3e-08 1
TIGR_CMR|BA_2855 - symbol:BA_2855 "cytidine and deoxycyti... 124 5.3e-08 1
TAIR|locus:2134373 - symbol:AT4G29620 species:3702 "Arabi... 117 1.1e-05 1
TAIR|locus:2134358 - symbol:AT4G29610 species:3702 "Arabi... 115 2.0e-05 1
UNIPROTKB|Q9KSM5 - symbol:cdd "Cytidine deaminase" specie... 115 2.0e-05 1
TIGR_CMR|VC_1231 - symbol:VC_1231 "cytidine deaminase" sp... 115 2.0e-05 1
TAIR|locus:2134338 - symbol:AT4G29600 species:3702 "Arabi... 114 3.1e-05 1
TAIR|locus:2134403 - symbol:AT4G29640 species:3702 "Arabi... 113 5.4e-05 1
>UNIPROTKB|E1BNY1 [details] [associations]
symbol:CDA "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051289 "protein homotetramerization" evidence=IEA]
[GO:0045980 "negative regulation of nucleotide metabolic process"
evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0030308 "negative regulation of cell growth"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004126 "cytidine deaminase activity" evidence=IEA] [GO:0001882
"nucleoside binding" evidence=IEA] InterPro:IPR002125
InterPro:IPR006262 InterPro:IPR016192 InterPro:IPR016193
Pfam:PF00383 PROSITE:PS00903 GO:GO:0030308 GO:GO:0008270
GO:GO:0004126 SUPFAM:SSF53927 GO:GO:0051289 GO:GO:0001882
GO:GO:0045980 KO:K01489 TIGRFAMs:TIGR01354 CTD:978 OMA:KLVKMAL
GeneTree:ENSGT00390000000911 EMBL:DAAA02006491 IPI:IPI00710110
RefSeq:NP_001180039.1 UniGene:Bt.59621 Ensembl:ENSBTAT00000008074
GeneID:616377 KEGG:bta:616377 NextBio:20900106 Uniprot:E1BNY1
Length = 146
Score = 291 (107.5 bits), Expect = 1.1e-25, P = 1.1e-25
Identities = 62/122 (50%), Positives = 83/122 (68%)
Query: 11 ALDPIEQNLANLSIQ-ARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEK 69
AL+P LS Q A+ +AYCPYS+ VGAALL D IF+GCN+ENA Y +++CAE+
Sbjct: 9 ALEPQHVQRLLLSCQEAKKSAYCPYSRFPVGAALLTGDGRIFSGCNIENACYPLSVCAER 68
Query: 70 TAISKAISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRS 129
TAI KAISEG +F+ IA+++ L D F+SPCG+CRQV+ EF + D V + K D +
Sbjct: 69 TAIQKAISEGYKEFRAIAIASDLQDD--FISPCGACRQVMREFGT---DWAVYMTKLDGT 123
Query: 130 QV 131
V
Sbjct: 124 YV 125
>UNIPROTKB|E2RBK6 [details] [associations]
symbol:CDA "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051289 "protein homotetramerization"
evidence=IEA] [GO:0045980 "negative regulation of nucleotide
metabolic process" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0030308 "negative
regulation of cell growth" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0004126 "cytidine deaminase activity"
evidence=IEA] [GO:0001882 "nucleoside binding" evidence=IEA]
InterPro:IPR002125 InterPro:IPR006262 InterPro:IPR016192
InterPro:IPR016193 Pfam:PF00383 PROSITE:PS00903 GO:GO:0030308
GO:GO:0008270 GO:GO:0004126 SUPFAM:SSF53927 GO:GO:0051289
GO:GO:0001882 GO:GO:0045980 KO:K01489 TIGRFAMs:TIGR01354 CTD:978
GeneTree:ENSGT00390000000911 EMBL:AAEX03001794 EMBL:AAEX03001795
RefSeq:XP_544519.1 ProteinModelPortal:E2RBK6
Ensembl:ENSCAFT00000023893 GeneID:487393 KEGG:cfa:487393
OMA:VVVYTDT NextBio:20860991 Uniprot:E2RBK6
Length = 146
Score = 289 (106.8 bits), Expect = 1.8e-25, P = 1.8e-25
Identities = 60/107 (56%), Positives = 77/107 (71%)
Query: 10 SALDP-IEQNLANLSIQ-ARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICA 67
SAL+P + Q L LS Q A+ +AYCPYS VGAA+L QD IF+GCN+EN Y + +CA
Sbjct: 8 SALEPELVQRLL-LSCQEAKKSAYCPYSHFPVGAAILTQDGRIFSGCNIENVCYPLGVCA 66
Query: 68 EKTAISKAISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSS 114
E+TAI KAISEG +F+ IA+S+ L D F+SPCG+CRQ + EF S
Sbjct: 67 ERTAIQKAISEGHREFRAIAISSDLQDD--FISPCGACRQFMREFGS 111
>ZFIN|ZDB-GENE-040426-1911 [details] [associations]
symbol:cda "cytidine deaminase" species:7955
"Danio rerio" [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0004126 "cytidine deaminase activity"
evidence=IEA] [GO:0009972 "cytidine deamination" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR002125
InterPro:IPR006262 InterPro:IPR016192 InterPro:IPR016193
Pfam:PF00383 PROSITE:PS00903 ZFIN:ZDB-GENE-040426-1911
GO:GO:0008270 GO:GO:0004126 SUPFAM:SSF53927 eggNOG:COG0295
KO:K01489 TIGRFAMs:TIGR01354 CTD:978 HOGENOM:HOG000014707
HOVERGEN:HBG005294 OrthoDB:EOG4WSWBW GeneTree:ENSGT00390000000911
OMA:KANIRNE HSSP:P13652 EMBL:CR558302 EMBL:BC065476 IPI:IPI00481646
RefSeq:NP_991242.1 UniGene:Dr.29769 SMR:Q6P0R4 STRING:Q6P0R4
Ensembl:ENSDART00000055694 GeneID:402979 KEGG:dre:402979
InParanoid:Q6P0R4 NextBio:20816786 Uniprot:Q6P0R4
Length = 159
Score = 288 (106.4 bits), Expect = 2.2e-25, P = 2.2e-25
Identities = 60/121 (49%), Positives = 83/121 (68%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
+ L S +A+ AYCPYSK +VGAALL D T+FTGCNVENA + + ICAE+ AISKA+
Sbjct: 22 KELTRKSQEAKKFAYCPYSKFRVGAALLTHDGTVFTGCNVENACFNLGICAERVAISKAV 81
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQVGLITI 136
SEG FK IA+++ + ++ F+SPCG CRQ + EF S + +V + K D S V + T+
Sbjct: 82 SEGYRDFKAIAIASDMCEN--FISPCGGCRQFMREFGS---NWEVYLSKPDGSYVEM-TV 135
Query: 137 D 137
+
Sbjct: 136 E 136
>ZFIN|ZDB-GENE-041114-88 [details] [associations]
symbol:zgc:103586 "zgc:103586" species:7955 "Danio
rerio" [GO:0016787 "hydrolase activity" evidence=IEA] [GO:0004126
"cytidine deaminase activity" evidence=IEA] [GO:0009972 "cytidine
deamination" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR002125
InterPro:IPR006262 InterPro:IPR016192 InterPro:IPR016193
Pfam:PF00383 PROSITE:PS00903 ZFIN:ZDB-GENE-041114-88 GO:GO:0008270
GO:GO:0004126 SUPFAM:SSF53927 eggNOG:COG0295 TIGRFAMs:TIGR01354
HOGENOM:HOG000014707 HOVERGEN:HBG005294 EMBL:BC085561
IPI:IPI00836056 RefSeq:NP_001007390.1 UniGene:Dr.25811
ProteinModelPortal:Q5U3F7 SMR:Q5U3F7 STRING:Q5U3F7 GeneID:492517
KEGG:dre:492517 InParanoid:Q5U3F7 OrthoDB:EOG48WC3G
NextBio:20865077 ArrayExpress:Q5U3F7 Uniprot:Q5U3F7
Length = 133
Score = 286 (105.7 bits), Expect = 3.6e-25, P = 3.6e-25
Identities = 57/106 (53%), Positives = 74/106 (69%)
Query: 24 IQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQTKF 83
+QAR+ AYCPYS VGAA+L I TGCNVENASYG+T+CAE+TAI +A++EG +F
Sbjct: 11 LQAREMAYCPYSGFPVGAAILTTGGAIVTGCNVENASYGLTVCAERTAIQRAVAEGYRRF 70
Query: 84 KRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRS 129
IAV+ + DS FV PCG+CRQV+ EF + + V + K D S
Sbjct: 71 TAIAVTCDIKDS--FVGPCGACRQVLMEFGT---EWDVYLTKPDGS 111
>MGI|MGI:1919519 [details] [associations]
symbol:Cda "cytidine deaminase" species:10090 "Mus musculus"
[GO:0001882 "nucleoside binding" evidence=ISO] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0004126 "cytidine deaminase
activity" evidence=ISO] [GO:0005829 "cytosol" evidence=ISO]
[GO:0008152 "metabolic process" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=ISO] [GO:0009972 "cytidine deamination"
evidence=ISO] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0030308 "negative regulation of cell growth" evidence=ISO]
[GO:0042802 "identical protein binding" evidence=IPI] [GO:0042803
"protein homodimerization activity" evidence=ISO] [GO:0045980
"negative regulation of nucleotide metabolic process" evidence=ISO]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0051289 "protein
homotetramerization" evidence=ISO] InterPro:IPR002125
InterPro:IPR006262 InterPro:IPR016192 InterPro:IPR016193
Pfam:PF00383 PROSITE:PS00903 MGI:MGI:1919519 GO:GO:0005829
GO:GO:0042803 GO:GO:0030308 GO:GO:0046872 GO:GO:0008270
GO:GO:0004126 SUPFAM:SSF53927 GO:GO:0051289 GO:GO:0001882
GO:GO:0045980 GO:GO:0046898 eggNOG:COG0295 KO:K01489
TIGRFAMs:TIGR01354 CTD:978 HOGENOM:HOG000014707 HOVERGEN:HBG005294
OMA:KLVKMAL OrthoDB:EOG4WSWBW GO:GO:0071217 EMBL:AK008793
EMBL:BC050114 IPI:IPI00110866 RefSeq:NP_082452.1 UniGene:Mm.46182
PDB:1ZAB PDB:2FR5 PDB:2FR6 PDBsum:1ZAB PDBsum:2FR5 PDBsum:2FR6
ProteinModelPortal:P56389 SMR:P56389 MINT:MINT-218728 STRING:P56389
PhosphoSite:P56389 PaxDb:P56389 PRIDE:P56389
Ensembl:ENSMUST00000030535 GeneID:72269 KEGG:mmu:72269
GeneTree:ENSGT00390000000911 InParanoid:P56389 BindingDB:P56389
ChEMBL:CHEMBL2110 EvolutionaryTrace:P56389 NextBio:335863
Bgee:P56389 CleanEx:MM_CDA Genevestigator:P56389
GermOnline:ENSMUSG00000028755 Uniprot:P56389
Length = 146
Score = 284 (105.0 bits), Expect = 5.9e-25, P = 5.9e-25
Identities = 60/118 (50%), Positives = 81/118 (68%)
Query: 11 ALDPIE-QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEK 69
A++P Q L S +A+ +AYCPYS+ VGAALL D IF+GCN+ENA Y + +CAE+
Sbjct: 9 AVEPEHVQRLLLSSREAKKSAYCPYSRFPVGAALLTGDGRIFSGCNIENACYPLGVCAER 68
Query: 70 TAISKAISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSD 127
TAI KAISEG F+ IA+S+ L + +F+SPCG+CRQV+ EF + D V + K D
Sbjct: 69 TAIQKAISEGYKDFRAIAISSDLQE--EFISPCGACRQVMREFGT---DWAVYMTKPD 121
>UNIPROTKB|I3LAH9 [details] [associations]
symbol:CDA "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051289 "protein homotetramerization" evidence=IEA]
[GO:0045980 "negative regulation of nucleotide metabolic process"
evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0030308 "negative regulation of cell growth"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004126 "cytidine deaminase activity" evidence=IEA] [GO:0001882
"nucleoside binding" evidence=IEA] InterPro:IPR002125
InterPro:IPR006262 InterPro:IPR016192 InterPro:IPR016193
Pfam:PF00383 PROSITE:PS00903 GO:GO:0030308 GO:GO:0008270
GO:GO:0004126 SUPFAM:SSF53927 GO:GO:0051289 GO:GO:0001882
GO:GO:0045980 TIGRFAMs:TIGR01354 OMA:KLVKMAL
GeneTree:ENSGT00390000000911 EMBL:FP565731
Ensembl:ENSSSCT00000026673 Uniprot:I3LAH9
Length = 146
Score = 282 (104.3 bits), Expect = 9.7e-25, P = 9.7e-25
Identities = 56/106 (52%), Positives = 78/106 (73%)
Query: 11 ALDP--IEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAE 68
AL+P ++Q L + +A+ +AYCPYS+ VGAALL D IF+GCN+ENA Y + +CAE
Sbjct: 9 ALEPEHVQQLLFSCR-EAKKSAYCPYSRFPVGAALLTGDGRIFSGCNIENACYPLGVCAE 67
Query: 69 KTAISKAISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSS 114
+TAI KAISEG +F+ IA+++ L D F+SPCG+CRQV+ EF +
Sbjct: 68 RTAIQKAISEGYKEFRAIAIASDLQDD--FISPCGACRQVMREFGT 111
>RGD|1311101 [details] [associations]
symbol:Cda "cytidine deaminase" species:10116 "Rattus
norvegicus" [GO:0001882 "nucleoside binding" evidence=ISO]
[GO:0004126 "cytidine deaminase activity" evidence=ISO;IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0008270 "zinc ion binding"
evidence=IEA;ISO] [GO:0009972 "cytidine deamination"
evidence=ISO;IDA] [GO:0030308 "negative regulation of cell growth"
evidence=ISO] [GO:0042802 "identical protein binding" evidence=ISO]
[GO:0042803 "protein homodimerization activity" evidence=ISO]
[GO:0045980 "negative regulation of nucleotide metabolic process"
evidence=ISO] [GO:0046898 "response to cycloheximide" evidence=IEP]
[GO:0051289 "protein homotetramerization" evidence=ISO] [GO:0071217
"cellular response to external biotic stimulus" evidence=IEP]
InterPro:IPR002125 InterPro:IPR006262 InterPro:IPR016192
InterPro:IPR016193 Pfam:PF00383 PROSITE:PS00903 RGD:1311101
GO:GO:0005829 GO:GO:0030308 GO:GO:0008270 GO:GO:0004126
SUPFAM:SSF53927 GO:GO:0051289 GO:GO:0001882 GO:GO:0045980
GO:GO:0046898 KO:K01489 TIGRFAMs:TIGR01354 CTD:978 OMA:KLVKMAL
OrthoDB:EOG4WSWBW GO:GO:0071217 GeneTree:ENSGT00390000000911
EMBL:CH473968 IPI:IPI00359108 RefSeq:NP_001102158.1
RefSeq:XP_003750114.1 UniGene:Rn.6887 Ensembl:ENSRNOT00000021036
GeneID:100909857 GeneID:362638 KEGG:rno:100909857 KEGG:rno:362638
UCSC:RGD:1311101 NextBio:680707 Uniprot:D4AC20
Length = 146
Score = 279 (103.3 bits), Expect = 2.0e-24, P = 2.0e-24
Identities = 56/105 (53%), Positives = 76/105 (72%)
Query: 11 ALDPIE-QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEK 69
A++P Q L S +A+ +AYCPYS+ VGAALL D IF+GCNVENA Y + +CAE+
Sbjct: 9 AVEPEHVQRLLLSSREAKKSAYCPYSRFPVGAALLTGDGRIFSGCNVENACYPLGVCAER 68
Query: 70 TAISKAISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSS 114
TAI KAISEG F+ IA+++ L + +F+SPCG+CRQV+ EF +
Sbjct: 69 TAIQKAISEGYKDFRAIAIASDLQE--EFISPCGACRQVMREFGT 111
>FB|FBgn0032001 [details] [associations]
symbol:CG8360 species:7227 "Drosophila melanogaster"
[GO:0004126 "cytidine deaminase activity" evidence=ISS] [GO:0009972
"cytidine deamination" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR002125 InterPro:IPR006262
InterPro:IPR016193 Pfam:PF00383 EMBL:AE014134 GO:GO:0008270
GO:GO:0004126 SUPFAM:SSF53927 KO:K01489 TIGRFAMs:TIGR01354
GeneTree:ENSGT00390000000911 UniGene:Dm.13858 GeneID:34122
KEGG:dme:Dmel_CG8360 FlyBase:FBgn0032001 GenomeRNAi:34122
NextBio:786965 HSSP:P19079 EMBL:BT011046 RefSeq:NP_609195.1
SMR:Q9VLR3 MINT:MINT-342192 STRING:Q9VLR3
EnsemblMetazoa:FBtr0089935 EnsemblMetazoa:FBtr0332414
UCSC:CG8360-RA InParanoid:Q9VLR3 OMA:RNNAYCP Uniprot:Q9VLR3
Length = 158
Score = 277 (102.6 bits), Expect = 3.3e-24, P = 3.3e-24
Identities = 52/108 (48%), Positives = 70/108 (64%)
Query: 5 DIMEFSALDPIEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMT 64
++ EF +LDP Q + + +AR AYCPYS VGAAL D TI++GCN+EN +Y
Sbjct: 14 NVREFQSLDPSIQEIILAATEARKQAYCPYSNFAVGAALRTSDGTIYSGCNIENGAYATC 73
Query: 65 ICAEKTAISKAISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEF 112
ICAE+TA KAISEG+ F +A + + N F +PCG CRQ ++EF
Sbjct: 74 ICAERTAAVKAISEGKRDF--VACAVVAQQDNGFTTPCGVCRQFLSEF 119
>UNIPROTKB|P32320 [details] [associations]
symbol:CDA "Cytidine deaminase" species:9606 "Homo sapiens"
[GO:0005829 "cytosol" evidence=NAS;TAS] [GO:0008270 "zinc ion
binding" evidence=IDA;TAS] [GO:0051289 "protein
homotetramerization" evidence=IDA] [GO:0042803 "protein
homodimerization activity" evidence=IDA] [GO:0001882 "nucleoside
binding" evidence=IDA] [GO:0030308 "negative regulation of cell
growth" evidence=IDA] [GO:0004126 "cytidine deaminase activity"
evidence=EXP;IDA] [GO:0045980 "negative regulation of nucleotide
metabolic process" evidence=IDA] [GO:0007166 "cell surface receptor
signaling pathway" evidence=NAS] [GO:0005576 "extracellular region"
evidence=TAS] [GO:0008655 "pyrimidine-containing compound salvage"
evidence=NAS] [GO:0009972 "cytidine deamination" evidence=IDA]
[GO:0019858 "cytosine metabolic process" evidence=TAS] [GO:0006206
"pyrimidine nucleobase metabolic process" evidence=TAS] [GO:0043097
"pyrimidine nucleoside salvage" evidence=TAS] [GO:0044281 "small
molecule metabolic process" evidence=TAS] [GO:0055086
"nucleobase-containing small molecule metabolic process"
evidence=TAS] Reactome:REACT_111217 InterPro:IPR002125
InterPro:IPR006262 InterPro:IPR016192 InterPro:IPR016193
Pfam:PF00383 PROSITE:PS00903 EMBL:S52873 GO:GO:0005829
GO:GO:0005576 GO:GO:0042803 GO:GO:0030308 GO:GO:0046872
GO:GO:0008270 GO:GO:0004126 SUPFAM:SSF53927 GO:GO:0051289
GO:GO:0007166 GO:GO:0001882 DrugBank:DB00987 GO:GO:0045980
GO:GO:0046898 eggNOG:COG0295 KO:K01489 TIGRFAMs:TIGR01354
EMBL:L27943 EMBL:AF061658 EMBL:AF061655 EMBL:AF061656 EMBL:AF061657
EMBL:AJ000474 EMBL:AL391357 EMBL:BC054036 IPI:IPI00027983
PIR:I52710 RefSeq:NP_001776.1 UniGene:Hs.466910 PDB:1MQ0
PDBsum:1MQ0 ProteinModelPortal:P32320 SMR:P32320 STRING:P32320
PhosphoSite:P32320 DMDM:1705718 PaxDb:P32320 PeptideAtlas:P32320
PRIDE:P32320 DNASU:978 Ensembl:ENST00000375071 GeneID:978
KEGG:hsa:978 UCSC:uc001bdk.3 CTD:978 GeneCards:GC01P020915
HGNC:HGNC:1712 MIM:123920 neXtProt:NX_P32320 PharmGKB:PA98
HOGENOM:HOG000014707 HOVERGEN:HBG005294 InParanoid:P32320
OMA:KLVKMAL OrthoDB:EOG4WSWBW PhylomeDB:P32320 SABIO-RK:P32320
BindingDB:P32320 ChEMBL:CHEMBL4502 ChiTaRS:CDA DrugBank:DB00928
DrugBank:DB01101 DrugBank:DB00441 EvolutionaryTrace:P32320
GenomeRNAi:978 NextBio:4112 ArrayExpress:P32320 Bgee:P32320
CleanEx:HS_CDA Genevestigator:P32320 GermOnline:ENSG00000158825
GO:GO:0071217 GO:GO:0019858 GO:GO:0043097 Uniprot:P32320
Length = 146
Score = 276 (102.2 bits), Expect = 4.2e-24, P = 4.2e-24
Identities = 53/98 (54%), Positives = 70/98 (71%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
Q L S +A+ +AYCPYS VGAALL Q+ IF GCN+ENA Y + ICAE+TAI KA+
Sbjct: 16 QQLLVCSQEAKKSAYCPYSHFPVGAALLTQEGRIFKGCNIENACYPLGICAERTAIQKAV 75
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSS 114
SEG F+ IA+++ + D F+SPCG+CRQV+ EF +
Sbjct: 76 SEGYKDFRAIAIASDMQDD--FISPCGACRQVMREFGT 111
>DICTYBASE|DDB_G0288933 [details] [associations]
symbol:cda "cytidine deaminase" species:44689
"Dictyostelium discoideum" [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0009972 "cytidine deamination" evidence=IEA;ISS]
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] [GO:0004126
"cytidine deaminase activity" evidence=IEA;ISS] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008655 "pyrimidine-containing compound salvage"
evidence=ISS] [GO:0006217 "deoxycytidine catabolic process"
evidence=ISS] [GO:0006216 "cytidine catabolic process"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR002125 InterPro:IPR006262
InterPro:IPR016193 Pfam:PF00383 PROSITE:PS00903
dictyBase:DDB_G0288933 GO:GO:0005634 GO:GO:0005737 GO:GO:0046872
GO:GO:0008270 EMBL:AAFI02000126 GenomeReviews:CM000154_GR
GO:GO:0004126 SUPFAM:SSF53927 RefSeq:XP_636497.1 HSSP:P32320
ProteinModelPortal:Q54I82 STRING:Q54I82 EnsemblProtists:DDB0230205
GeneID:8626880 KEGG:ddi:DDB_G0288933 eggNOG:COG0295 KO:K01489
OMA:CAERTAY ProtClustDB:CLSZ2429832 GO:GO:0006217 GO:GO:0008655
TIGRFAMs:TIGR01354 Uniprot:Q54I82
Length = 147
Score = 270 (100.1 bits), Expect = 1.8e-23, P = 1.8e-23
Identities = 55/100 (55%), Positives = 71/100 (71%)
Query: 30 AYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQTKFKRIAVS 89
A+CPYS ++GAALL IFTG NVEN+SYG+TICAE+TA +KA+SEG FK I V+
Sbjct: 20 AHCPYSHFRIGAALLTSCGKIFTGVNVENSSYGLTICAERTAYTKAVSEGYKSFKGIVVA 79
Query: 90 AILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRS 129
+ L D +F++PCG+CRQ EF D +V+ VK DRS
Sbjct: 80 SDLKD--RFITPCGACRQFGVEFG----DFEVVCVKPDRS 113
>FB|FBgn0032002 [details] [associations]
symbol:CG8353 species:7227 "Drosophila melanogaster"
[GO:0004126 "cytidine deaminase activity" evidence=ISS] [GO:0009972
"cytidine deamination" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR002125 InterPro:IPR006262
InterPro:IPR016192 InterPro:IPR016193 Pfam:PF00383 PROSITE:PS00903
EMBL:AE014134 GO:GO:0008270 GO:GO:0004126 SUPFAM:SSF53927
eggNOG:COG0295 KO:K01489 TIGRFAMs:TIGR01354
GeneTree:ENSGT00390000000911 OrthoDB:EOG4CVDQC HSSP:P19079
EMBL:AY070601 RefSeq:NP_609196.1 UniGene:Dm.6359 SMR:Q9VLR2
STRING:Q9VLR2 EnsemblMetazoa:FBtr0079593 EnsemblMetazoa:FBtr0332415
GeneID:34123 KEGG:dme:Dmel_CG8353 UCSC:CG8353-RA
FlyBase:FBgn0032002 InParanoid:Q9VLR2 OMA:VCRQFIR GenomeRNAi:34123
NextBio:786970 Uniprot:Q9VLR2
Length = 170
Score = 270 (100.1 bits), Expect = 1.8e-23, P = 1.8e-23
Identities = 58/123 (47%), Positives = 78/123 (63%)
Query: 5 DIMEFSALDPIEQNLANLSIQARDNAYCPYSKLQVGAALLCQ-DDTIFTGCNVENASYGM 63
+++ F +LDP Q L + Q R AY PYS +VGAA + D IFTGCNVENA++
Sbjct: 16 EVVTFGSLDPSVQELLTAAFQVRQRAYVPYSGFKVGAAFRAKVDGKIFTGCNVENAAFTP 75
Query: 64 TICAEKTAISKAISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLI 123
CAE+TAI+KA+SEG T+F AV A P N F +PCG CRQ I EF++ DI + +
Sbjct: 76 GSCAERTAIAKAVSEGATEFLAGAVLAYEP--NVFTTPCGVCRQFIREFAN--ADIPIYV 131
Query: 124 VKS 126
++
Sbjct: 132 AQA 134
>TIGR_CMR|BA_4525 [details] [associations]
symbol:BA_4525 "cytidine deaminase" species:198094
"Bacillus anthracis str. Ames" [GO:0004126 "cytidine deaminase
activity" evidence=ISS] [GO:0008655 "pyrimidine-containing compound
salvage" evidence=ISS] InterPro:IPR002125 InterPro:IPR006262
InterPro:IPR016192 InterPro:IPR016193 Pfam:PF00383 PROSITE:PS00903
GO:GO:0046872 EMBL:AE016879 EMBL:AE017334 EMBL:AE017225
GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0008270 GO:GO:0004126
SUPFAM:SSF53927 KO:K01489 TIGRFAMs:TIGR01354 HOGENOM:HOG000014707
OMA:VAACICT RefSeq:NP_846748.1 RefSeq:YP_021171.1
RefSeq:YP_030448.1 PDB:2D30 PDBsum:2D30 ProteinModelPortal:Q81LT6
SMR:Q81LT6 IntAct:Q81LT6 DNASU:1088257
EnsemblBacteria:EBBACT00000009427 EnsemblBacteria:EBBACT00000017736
EnsemblBacteria:EBBACT00000021178 GeneID:1088257 GeneID:2819017
GeneID:2848214 KEGG:ban:BA_4525 KEGG:bar:GBAA_4525 KEGG:bat:BAS4200
ProtClustDB:PRK12411 BioCyc:BANT260799:GJAJ-4256-MONOMER
BioCyc:BANT261594:GJ7F-4401-MONOMER EvolutionaryTrace:Q81LT6
Uniprot:Q81LT6
Length = 132
Score = 269 (99.8 bits), Expect = 2.3e-23, P = 2.3e-23
Identities = 60/132 (45%), Positives = 84/132 (63%)
Query: 17 QNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAI 76
+ L +I+AR AY PYSK QVGAALL QD ++ GCNVENASYG+ CAE+TA+ KA+
Sbjct: 4 KQLIQEAIEARKQAYVPYSKFQVGAALLTQDGKVYRGCNVENASYGLCNCAERTALFKAV 63
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSD--RSQVGLI 134
SEG +F +A+ AI+ D+ + V PCG+CRQV+ E + + + D + VG +
Sbjct: 64 SEGDKEF--VAI-AIVADTKRPVPPCGACRQVMVELCKQDTKVYLSNLHGDVQETTVGEL 120
Query: 135 TIDGMYLT--LH 144
+ G +L LH
Sbjct: 121 -LPGAFLAEDLH 131
>TIGR_CMR|BA_1895 [details] [associations]
symbol:BA_1895 "cytidine deaminase" species:198094
"Bacillus anthracis str. Ames" [GO:0004126 "cytidine deaminase
activity" evidence=ISS] [GO:0008655 "pyrimidine-containing compound
salvage" evidence=ISS] InterPro:IPR002125 InterPro:IPR006262
InterPro:IPR016192 InterPro:IPR016193 Pfam:PF00383 PROSITE:PS00903
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0008270
GO:GO:0004126 SUPFAM:SSF53927 KO:K01489 TIGRFAMs:TIGR01354
HOGENOM:HOG000014707 ProtClustDB:PRK05578 HSSP:P19079
RefSeq:NP_844306.1 RefSeq:YP_018539.1 RefSeq:YP_028021.1
ProteinModelPortal:Q81RZ0 SMR:Q81RZ0 DNASU:1083735
EnsemblBacteria:EBBACT00000010581 EnsemblBacteria:EBBACT00000016777
EnsemblBacteria:EBBACT00000023501 GeneID:1083735 GeneID:2816918
GeneID:2851398 KEGG:ban:BA_1895 KEGG:bar:GBAA_1895 KEGG:bat:BAS1757
OMA:FRERTLN BioCyc:BANT260799:GJAJ-1826-MONOMER
BioCyc:BANT261594:GJ7F-1900-MONOMER Uniprot:Q81RZ0
Length = 131
Score = 268 (99.4 bits), Expect = 2.9e-23, P = 2.9e-23
Identities = 51/102 (50%), Positives = 71/102 (69%)
Query: 30 AYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQTKFKRIAVS 89
AY PYSK VGAAL+ ++ I+TGCN+ENASYG+ CAE+TAI KA+SEG+ F + ++
Sbjct: 17 AYIPYSKFPVGAALVTKEGKIYTGCNIENASYGLCNCAERTAIFKAVSEGERDFSYLVIT 76
Query: 90 AILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQV 131
+++ +SPCG+CRQVIAEF P + + VK D +V
Sbjct: 77 G---ETDGPISPCGACRQVIAEFCDPKMPVLLTNVKGDEKEV 115
>UNIPROTKB|E1C6V1 [details] [associations]
symbol:CDA "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004126 "cytidine deaminase activity" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR002125
InterPro:IPR006262 InterPro:IPR016192 InterPro:IPR016193
Pfam:PF00383 PROSITE:PS00903 GO:GO:0008270 GO:GO:0004126
SUPFAM:SSF53927 TIGRFAMs:TIGR01354 OMA:KLVKMAL
GeneTree:ENSGT00390000000911 EMBL:AADN02040665 IPI:IPI00684094
Ensembl:ENSGALT00000011937 Uniprot:E1C6V1
Length = 169
Score = 267 (99.0 bits), Expect = 3.8e-23, P = 3.8e-23
Identities = 50/107 (46%), Positives = 75/107 (70%)
Query: 25 QARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQTKFK 84
+A+D AYCPYS+ VGAA++ IF+GCNVENA Y + +CAE+ AI KAISEG T+F+
Sbjct: 49 EAKDCAYCPYSRFPVGAAVVTAGGEIFSGCNVENACYSLGVCAERIAIQKAISEGHTRFR 108
Query: 85 RIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQV 131
+A+++ D + F++PCG+CRQV+ EF + D + + K D + +
Sbjct: 109 AMAIAS---DMSDFITPCGACRQVMREFGT---DWDLYLTKPDGTYI 149
>WB|WBGene00000391 [details] [associations]
symbol:cdd-1 species:6239 "Caenorhabditis elegans"
[GO:0004126 "cytidine deaminase activity" evidence=IEA;ISS]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0009972 "cytidine deamination"
evidence=IEA] [GO:0016070 "RNA metabolic process" evidence=ISS]
[GO:0009451 "RNA modification" evidence=IDA] [GO:0005622
"intracellular" evidence=IDA] [GO:0047844 "deoxycytidine deaminase
activity" evidence=IDA] [GO:0003723 "RNA binding" evidence=IDA]
[GO:0006217 "deoxycytidine catabolic process" evidence=IDA]
InterPro:IPR002125 InterPro:IPR006262 InterPro:IPR016192
InterPro:IPR016193 Pfam:PF00383 PROSITE:PS00903 GO:GO:0008270
GO:GO:0004126 SUPFAM:SSF53927 GO:GO:0003723 GO:GO:0047844
GO:GO:0005622 HSSP:P32320 eggNOG:COG0295 KO:K01489 GO:GO:0006217
TIGRFAMs:TIGR01354 HOGENOM:HOG000014707
GeneTree:ENSGT00390000000911 GO:GO:0009451 EMBL:FO080596 PIR:T25654
RefSeq:NP_509384.1 ProteinModelPortal:Q22922 SMR:Q22922
IntAct:Q22922 STRING:Q22922 PaxDb:Q22922 EnsemblMetazoa:C47D2.2
GeneID:183546 KEGG:cel:CELE_C47D2.2 UCSC:C47D2.2 CTD:183546
WormBase:C47D2.2 InParanoid:Q22922 OMA:VCEDGEI NextBio:921512
Uniprot:Q22922
Length = 158
Score = 258 (95.9 bits), Expect = 3.4e-22, P = 3.4e-22
Identities = 57/120 (47%), Positives = 73/120 (60%)
Query: 12 LDPIEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTA 71
L EQ L + +I A +NAYC YS +VGAAL+C D I G N ENASYG TICAE++A
Sbjct: 8 LTEFEQQLVDKAIGAMENAYCKYSNFKVGAALVCDDGEIIIGANHENASYGATICAERSA 67
Query: 72 ISKAISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQV 131
I A+++G KFK I V+ L SPCG CRQV+ EF D +V++ S Q+
Sbjct: 68 IVTALTKGHRKFKYIVVATELEAP---CSPCGVCRQVLIEFG----DYKVILGSSTSDQI 120
>WB|WBGene00000392 [details] [associations]
symbol:cdd-2 species:6239 "Caenorhabditis elegans"
[GO:0004126 "cytidine deaminase activity" evidence=IEA;IDA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0009972 "cytidine deamination"
evidence=IEA] [GO:0009790 "embryo development" evidence=IMP]
[GO:0009451 "RNA modification" evidence=IDA] [GO:0005623 "cell"
evidence=IDA] [GO:0003723 "RNA binding" evidence=IDA] [GO:0047844
"deoxycytidine deaminase activity" evidence=IDA] [GO:0006217
"deoxycytidine catabolic process" evidence=IDA] InterPro:IPR002125
InterPro:IPR006262 InterPro:IPR016192 InterPro:IPR016193
Pfam:PF00383 PROSITE:PS00903 GO:GO:0008270 GO:GO:0004126
SUPFAM:SSF53927 GO:GO:0003723 GO:GO:0047844 GO:GO:0009790
GO:GO:0005623 HSSP:P32320 eggNOG:COG0295 KO:K01489 GO:GO:0006217
TIGRFAMs:TIGR01354 HOGENOM:HOG000014707
GeneTree:ENSGT00390000000911 GO:GO:0009451 EMBL:FO081280 PIR:T29638
RefSeq:NP_501221.1 ProteinModelPortal:Q20628 SMR:Q20628
DIP:DIP-26897N IntAct:Q20628 MINT:MINT-1076223 STRING:Q20628
PaxDb:Q20628 EnsemblMetazoa:F49E8.4 GeneID:186044
KEGG:cel:CELE_F49E8.4 UCSC:F49E8.4 CTD:186044 WormBase:F49E8.4
InParanoid:Q20628 OMA:KANIRNE NextBio:930436 Uniprot:Q20628
Length = 166
Score = 256 (95.2 bits), Expect = 5.5e-22, P = 5.5e-22
Identities = 58/123 (47%), Positives = 77/123 (62%)
Query: 13 DPIEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAI 72
D + L +L+ A A+CPYSK VGAALL + I GCNVENASYG TICAE++AI
Sbjct: 9 DISDVELVHLARAAMKRAHCPYSKFPVGAALLTESGEIVQGCNVENASYGGTICAERSAI 68
Query: 73 SKAISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQVG 132
A+S+G TKF+ IAV L + SPCG CRQ + EF D +V++ + +++
Sbjct: 69 VSAVSQGYTKFRAIAVVTELSEP---ASPCGLCRQFLVEFG----DYKVVVGTASNNKI- 120
Query: 133 LIT 135
LIT
Sbjct: 121 LIT 123
>UNIPROTKB|Q20628 [details] [associations]
symbol:cdd-2 "Protein CDD-2" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR002125 InterPro:IPR006262 InterPro:IPR016192
InterPro:IPR016193 Pfam:PF00383 PROSITE:PS00903 GO:GO:0008270
GO:GO:0004126 SUPFAM:SSF53927 GO:GO:0003723 GO:GO:0047844
GO:GO:0009790 GO:GO:0005623 HSSP:P32320 eggNOG:COG0295 KO:K01489
GO:GO:0006217 TIGRFAMs:TIGR01354 HOGENOM:HOG000014707
GeneTree:ENSGT00390000000911 GO:GO:0009451 EMBL:FO081280 PIR:T29638
RefSeq:NP_501221.1 ProteinModelPortal:Q20628 SMR:Q20628
DIP:DIP-26897N IntAct:Q20628 MINT:MINT-1076223 STRING:Q20628
PaxDb:Q20628 EnsemblMetazoa:F49E8.4 GeneID:186044
KEGG:cel:CELE_F49E8.4 UCSC:F49E8.4 CTD:186044 WormBase:F49E8.4
InParanoid:Q20628 OMA:KANIRNE NextBio:930436 Uniprot:Q20628
Length = 166
Score = 256 (95.2 bits), Expect = 5.5e-22, P = 5.5e-22
Identities = 58/123 (47%), Positives = 77/123 (62%)
Query: 13 DPIEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAI 72
D + L +L+ A A+CPYSK VGAALL + I GCNVENASYG TICAE++AI
Sbjct: 9 DISDVELVHLARAAMKRAHCPYSKFPVGAALLTESGEIVQGCNVENASYGGTICAERSAI 68
Query: 73 SKAISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQVG 132
A+S+G TKF+ IAV L + SPCG CRQ + EF D +V++ + +++
Sbjct: 69 VSAVSQGYTKFRAIAVVTELSEP---ASPCGLCRQFLVEFG----DYKVVVGTASNNKI- 120
Query: 133 LIT 135
LIT
Sbjct: 121 LIT 123
>TIGR_CMR|CHY_1553 [details] [associations]
symbol:CHY_1553 "cytidine deaminase" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0004126 "cytidine
deaminase activity" evidence=ISS] [GO:0008655
"pyrimidine-containing compound salvage" evidence=ISS]
InterPro:IPR002125 InterPro:IPR006262 InterPro:IPR016192
InterPro:IPR016193 Pfam:PF00383 PROSITE:PS00903 EMBL:CP000141
GenomeReviews:CP000141_GR GO:GO:0008270 GO:GO:0004126
SUPFAM:SSF53927 eggNOG:COG0295 KO:K01489 TIGRFAMs:TIGR01354
HOGENOM:HOG000014707 RefSeq:YP_360385.1 ProteinModelPortal:Q3ABU9
SMR:Q3ABU9 STRING:Q3ABU9 GeneID:3726457 KEGG:chy:CHY_1553
PATRIC:21276233 OMA:SYPVTLC BioCyc:CHYD246194:GJCN-1552-MONOMER
Uniprot:Q3ABU9
Length = 132
Score = 255 (94.8 bits), Expect = 7.0e-22, P = 7.0e-22
Identities = 57/119 (47%), Positives = 74/119 (62%)
Query: 25 QARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQTKFK 84
+AR+NAY PYS +VGAA+L + I+ G N+ENASYG+TICAE+ AI+KAISEG+ K K
Sbjct: 14 EARENAYVPYSGFKVGAAVLGESGKIYQGANIENASYGLTICAERVAITKAISEGEKKLK 73
Query: 85 RIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQVGLITIDGMYLTL 143
I V P +SPCG+CRQ +AEF I + + D + L I Y TL
Sbjct: 74 AILVVGDTPGP---ISPCGACRQFMAEFKIET--IYLANLAGDIKEFTLEQILPYYFTL 127
>TIGR_CMR|CPS_1969 [details] [associations]
symbol:CPS_1969 "cytidine deaminase" species:167879
"Colwellia psychrerythraea 34H" [GO:0004126 "cytidine deaminase
activity" evidence=ISS] [GO:0008655 "pyrimidine-containing compound
salvage" evidence=ISS] InterPro:IPR002125 InterPro:IPR006262
InterPro:IPR016193 Pfam:PF00383 GO:GO:0008270 GO:GO:0004126
SUPFAM:SSF53927 EMBL:CP000083 GenomeReviews:CP000083_GR
eggNOG:COG0295 KO:K01489 TIGRFAMs:TIGR01354 HOGENOM:HOG000014707
RefSeq:YP_268699.1 ProteinModelPortal:Q483R7 STRING:Q483R7
GeneID:3520170 KEGG:cps:CPS_1969 PATRIC:21467069 OMA:VAACICT
BioCyc:CPSY167879:GI48-2039-MONOMER Uniprot:Q483R7
Length = 139
Score = 249 (92.7 bits), Expect = 3.0e-21, P = 3.0e-21
Identities = 53/122 (43%), Positives = 75/122 (61%)
Query: 7 MEFSALDPIEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTIC 66
M+ + ++ ++ L + + +A AY PYSK VGA+ L D I GCNVENASYG+TIC
Sbjct: 1 MDKNKIERFDE-LLSAAKEAYQRAYAPYSKFHVGASALTTDGDIVNGCNVENASYGLTIC 59
Query: 67 AEKTAISKAISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKS 126
AE+ IS A+ +G+ FK I I + +K PCG+CRQVIAEF + + + K+
Sbjct: 60 AERNCISHAVVQGKQMFKFIM---IYTEQDKLTPPCGACRQVIAEFFEQSALVVAVNHKN 116
Query: 127 DR 128
DR
Sbjct: 117 DR 118
>ASPGD|ASPL0000049793 [details] [associations]
symbol:AN11146 species:162425 "Emericella nidulans"
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0004126 "cytidine deaminase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0009972 "cytidine deamination" evidence=IEA] [GO:0006216
"cytidine catabolic process" evidence=IEA] [GO:0008655
"pyrimidine-containing compound salvage" evidence=IEA] [GO:0006217
"deoxycytidine catabolic process" evidence=IEA] InterPro:IPR002125
InterPro:IPR006262 InterPro:IPR016193 Pfam:PF00383 GO:GO:0005634
GO:GO:0005737 EMBL:BN001307 GO:GO:0008270 GO:GO:0004126
SUPFAM:SSF53927 GO:GO:0006217 GO:GO:0008655 TIGRFAMs:TIGR01354
HOGENOM:HOG000014707 EnsemblFungi:CADANIAT00007991 OMA:DLLIDHP
Uniprot:C8VLU1
Length = 138
Score = 232 (86.7 bits), Expect = 1.9e-19, P = 1.9e-19
Identities = 48/96 (50%), Positives = 62/96 (64%)
Query: 19 LANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISE 78
LA+ + A++ AYCPYSK +VGAALL Q FTG NVENASY + CAE+ A A+
Sbjct: 12 LASKANAAKEAAYCPYSKFRVGAALLTQSGEFFTGANVENASYPVGTCAERVAFGTAVVA 71
Query: 79 GQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSS 114
G +FK IAV+ D SPCG CRQ ++EF++
Sbjct: 72 GHRRFKAIAVAT---DIKPPASPCGMCRQFMSEFTT 104
>FB|FBgn0032003 [details] [associations]
symbol:CG8349 species:7227 "Drosophila melanogaster"
[GO:0004126 "cytidine deaminase activity" evidence=ISS] [GO:0009972
"cytidine deamination" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR002125 InterPro:IPR006263
InterPro:IPR016192 InterPro:IPR016193 Pfam:PF00383
PIRSF:PIRSF006334 PROSITE:PS00903 GO:GO:0008270 GO:GO:0004126
SUPFAM:SSF53927 UniGene:Dm.5599 FlyBase:FBgn0032003 EMBL:AY075221
HSSP:P19079 ProteinModelPortal:Q8T8Y3 MINT:MINT-289970
STRING:Q8T8Y3 InParanoid:Q8T8Y3 Bgee:Q8T8Y3 Uniprot:Q8T8Y3
Length = 286
Score = 223 (83.6 bits), Expect = 1.7e-18, P = 1.7e-18
Identities = 50/118 (42%), Positives = 68/118 (57%)
Query: 9 FSALDPIEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAE 68
F A+ + L ++ AR AY PYSK +VGAA + I+ GCN+EN ++ CAE
Sbjct: 138 FCAVGEDGRELLEAALSARRCAYAPYSKFKVGAAFRAKCGRIYAGCNIENVAFTPGNCAE 197
Query: 69 KTAISKAISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKS 126
+ A++K ISEG+ K+ AV A PD F +PCG CRQ I EF DI + I K+
Sbjct: 198 RCALAKGISEGEKKYTAGAVVAYHPDG--FTTPCGVCRQFILEFIQN--DIPIYIAKA 251
>POMBASE|SPAC1556.04c [details] [associations]
symbol:cdd1 "cytidine deaminase Ccd1 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0004126 "cytidine
deaminase activity" evidence=ISO] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005829
"cytosol" evidence=IDA] [GO:0006206 "pyrimidine nucleobase
metabolic process" evidence=NAS] [GO:0006216 "cytidine catabolic
process" evidence=ISO] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0009972 "cytidine deamination" evidence=IEA] InterPro:IPR002125
InterPro:IPR006262 InterPro:IPR016192 InterPro:IPR016193
Pfam:PF00383 PROSITE:PS00903 PomBase:SPAC1556.04c GO:GO:0005829
GO:GO:0005634 EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0046872
GO:GO:0006206 GO:GO:0008270 GO:GO:0004126 SUPFAM:SSF53927
EMBL:X98329 eggNOG:COG0295 KO:K01489 TIGRFAMs:TIGR01354
HOGENOM:HOG000014707 OMA:KLVKMAL PIR:T50083 RefSeq:NP_594321.1
ProteinModelPortal:Q09190 STRING:Q09190 EnsemblFungi:SPAC1556.04c.1
GeneID:2541551 KEGG:spo:SPAC1556.04c OrthoDB:EOG49CTJD
NextBio:20802647 Uniprot:Q09190
Length = 133
Score = 220 (82.5 bits), Expect = 3.6e-18, P = 3.6e-18
Identities = 50/99 (50%), Positives = 61/99 (61%)
Query: 30 AYCPYSKLQVGAALLCQD-DTIFTGCNVENASYGMTICAEKTAISKAISEGQTKFKRIAV 88
+YCPYS VGA ++ D +T G NVENASYG ICAE+ AI+KA+S G TKF I V
Sbjct: 20 SYCPYSNFAVGACVVSDDKNTYIYGANVENASYGNCICAERVAITKAVSMGYTKFMAIGV 79
Query: 89 SAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSD 127
+ + V+PCG CRQVI EFS DI V + D
Sbjct: 80 MS----AKGRVTPCGICRQVIREFSK---DINVYMFHDD 111
>TIGR_CMR|SPO_2930 [details] [associations]
symbol:SPO_2930 "cytidine deaminase" species:246200
"Ruegeria pomeroyi DSS-3" [GO:0004126 "cytidine deaminase activity"
evidence=ISS] [GO:0008655 "pyrimidine-containing compound salvage"
evidence=ISS] InterPro:IPR002125 InterPro:IPR006262
InterPro:IPR016192 InterPro:IPR016193 Pfam:PF00383 PROSITE:PS00903
EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0008270 GO:GO:0004126
SUPFAM:SSF53927 KO:K01489 TIGRFAMs:TIGR01354 HOGENOM:HOG000014707
OMA:KLVKMAL RefSeq:YP_168138.1 ProteinModelPortal:Q5LPB8
GeneID:3194421 KEGG:sil:SPO2930 PATRIC:23379289
ProtClustDB:CLSK934000 Uniprot:Q5LPB8
Length = 130
Score = 208 (78.3 bits), Expect = 6.7e-17, P = 6.7e-17
Identities = 43/110 (39%), Positives = 64/110 (58%)
Query: 18 NLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAIS 77
+L + ++ R+NA+ PYS+ +VGAA+ ++ GCNVEN +Y CAE AI+ ++
Sbjct: 2 SLKSAALTVRENAHAPYSRFKVGAAIRGASGVVYAGCNVENIAYPEGTCAEAGAIAAMVA 61
Query: 78 EGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSD 127
G+T+ + V A DS V PCG CRQ +AEF P D+ V + D
Sbjct: 62 AGETRLSEVYVVA---DSPAPVPPCGGCRQKLAEFGDP--DVVVTMANLD 106
>SGD|S000004235 [details] [associations]
symbol:CDD1 "Cytidine deaminase" species:4932 "Saccharomyces
cerevisiae" [GO:0004126 "cytidine deaminase activity"
evidence=IEA;IDA] [GO:0009972 "cytidine deamination" evidence=IEA]
[GO:0008655 "pyrimidine-containing compound salvage" evidence=IDA]
[GO:0006217 "deoxycytidine catabolic process" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0006216 "cytidine catabolic process"
evidence=IDA] InterPro:IPR002125 InterPro:IPR006262
InterPro:IPR016192 InterPro:IPR016193 Pfam:PF00383 PROSITE:PS00903
SGD:S000004235 GO:GO:0005634 GO:GO:0005737 GO:GO:0046872
GO:GO:0008270 EMBL:BK006945 GO:GO:0004126 SUPFAM:SSF53927
EMBL:U20865 eggNOG:COG0295 KO:K01489 GO:GO:0006217 GO:GO:0008655
TIGRFAMs:TIGR01354 HOGENOM:HOG000014707 OMA:KLVKMAL
GeneTree:ENSGT00390000000911 OrthoDB:EOG49CTJD EMBL:AF080089
EMBL:AY557930 PIR:S59391 RefSeq:NP_013346.1 PDB:1R5T PDBsum:1R5T
ProteinModelPortal:Q06549 SMR:Q06549 DIP:DIP-1252N IntAct:Q06549
MINT:MINT-398236 STRING:Q06549 PaxDb:Q06549 PeptideAtlas:Q06549
EnsemblFungi:YLR245C GeneID:850946 KEGG:sce:YLR245C CYGD:YLR245c
EvolutionaryTrace:Q06549 NextBio:967405 Genevestigator:Q06549
GermOnline:YLR245C Uniprot:Q06549
Length = 142
Score = 195 (73.7 bits), Expect = 1.6e-15, P = 1.6e-15
Identities = 47/114 (41%), Positives = 66/114 (57%)
Query: 19 LANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISE 78
L +++A + +Y PYS +VG ++L +D IFTG NVENASY ICAE++A+ + +
Sbjct: 14 LKRAALKACELSYSPYSHFRVGCSILTNNDVIFTGANVENASYSNCICAERSAMIQVLMA 73
Query: 79 GQTKFKRIAVSAILPDS-NKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQV 131
G + V I DS ++ VSPCG CRQ I EF I +L RS+V
Sbjct: 74 GHRSGWKCMV--ICGDSEDQCVSPCGVCRQFINEFVVKDFPIVMLNSTGSRSKV 125
>UNIPROTKB|O53367 [details] [associations]
symbol:cdd "Cytidine deaminase" species:1773 "Mycobacterium
tuberculosis" [GO:0004126 "cytidine deaminase activity"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0008270 "zinc ion binding" evidence=IDA] [GO:0009972 "cytidine
deamination" evidence=IDA] [GO:0043100 "pyrimidine nucleobase
salvage" evidence=IDA] [GO:0046109 "uridine biosynthetic process"
evidence=IDA] [GO:0047844 "deoxycytidine deaminase activity"
evidence=IDA] [GO:0051289 "protein homotetramerization"
evidence=IPI] InterPro:IPR002125 InterPro:IPR016193 Pfam:PF00383
PROSITE:PS00903 GO:GO:0005886 EMBL:AE000516
GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR GO:GO:0046872
GO:GO:0008270 GO:GO:0004126 SUPFAM:SSF53927 GO:GO:0047844
GO:GO:0051289 EMBL:BX842582 KO:K01489 HOGENOM:HOG000014707
OMA:KLVKMAL PIR:B70843 RefSeq:NP_217832.1 RefSeq:NP_337944.1
RefSeq:YP_006516794.1 PDB:3IJF PDBsum:3IJF
ProteinModelPortal:O53367 SMR:O53367 PRIDE:O53367
EnsemblBacteria:EBMYCT00000002309 EnsemblBacteria:EBMYCT00000071212
GeneID:13318140 GeneID:887975 GeneID:926315 KEGG:mtc:MT3416
KEGG:mtu:Rv3315c KEGG:mtv:RVBD_3315c PATRIC:18129262
TubercuList:Rv3315c ProtClustDB:PRK05578 GO:GO:0043100
GO:GO:0046109 Uniprot:O53367
Length = 133
Score = 186 (70.5 bits), Expect = 1.4e-14, P = 1.4e-14
Identities = 39/87 (44%), Positives = 48/87 (55%)
Query: 25 QARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQTKFK 84
QA AY PYS+ VGAA L D + TGCNVEN SYG+T+CAE + S G
Sbjct: 15 QAAAGAYVPYSRFAVGAAALVDDGRVVTGCNVENVSYGLTLCAECAVVCALHSTGGG--- 71
Query: 85 RIAVSAILPDSNKFVSPCGSCRQVIAE 111
R+ A + + PCG CRQV+ E
Sbjct: 72 RLLALACVDGHGSVLMPCGRCRQVLLE 98
>TAIR|locus:2134388 [details] [associations]
symbol:AT4G29630 species:3702 "Arabidopsis thaliana"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0004126
"cytidine deaminase activity" evidence=IEA;ISS] [GO:0005575
"cellular_component" evidence=ND] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0009972 "cytidine deamination" evidence=IEA;ISS]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR002125
InterPro:IPR006263 InterPro:IPR013171 InterPro:IPR016192
InterPro:IPR016193 Pfam:PF00383 Pfam:PF08211 PIRSF:PIRSF006334
PROSITE:PS00903 EMBL:CP002687 GO:GO:0046872 GO:GO:0008270
GO:GO:0004126 SUPFAM:SSF53927 EMBL:AL161575 EMBL:AL079344
eggNOG:COG0295 TIGRFAMs:TIGR01355 EMBL:AF121877 HSSP:P13652
HOGENOM:HOG000218616 EMBL:DQ056662 IPI:IPI00540731 PIR:T09926
RefSeq:NP_194692.1 UniGene:At.54548 ProteinModelPortal:Q9S847
SMR:Q9S847 STRING:Q9S847 EnsemblPlants:AT4G29630.1 GeneID:829084
KEGG:ath:AT4G29630 TAIR:At4g29630 InParanoid:Q9S847
PhylomeDB:Q9S847 ArrayExpress:Q9S847 Genevestigator:Q9S847
Uniprot:Q9S847
Length = 223
Score = 126 (49.4 bits), Expect = 5.1e-08, P = 5.1e-08
Identities = 36/107 (33%), Positives = 55/107 (51%)
Query: 19 LANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGM--TICAEKTAISKAI 76
L NL +A A P SK +VGA + I+ G NVE + +I AE+ ++
Sbjct: 26 LPNLIGKAMSLALAPISKYKVGAVGRARSGRIYLGVNVELPGLPLHHSIHAEQFLVTNLA 85
Query: 77 SEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLI 123
+ +AV+ I D N F +PCG+CRQ + E S A +I++L+
Sbjct: 86 LNSEKGLHLLAVT-ISTDGNDFGAPCGNCRQFLMEISK-ALNIKILL 130
>UNIPROTKB|Q81PF4 [details] [associations]
symbol:BAS2661 "Cytidine and deoxycytidylate deaminase
family protein" species:1392 "Bacillus anthracis" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR002125
InterPro:IPR016192 InterPro:IPR016193 Pfam:PF00383 PROSITE:PS00903
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0008270
SUPFAM:SSF53927 GO:GO:0008152 GO:GO:0016787 KO:K01489
HOGENOM:HOG000014707 HSSP:P19079 RefSeq:NP_845197.1
RefSeq:YP_019497.1 RefSeq:YP_028920.1 ProteinModelPortal:Q81PF4
DNASU:1084273 EnsemblBacteria:EBBACT00000012331
EnsemblBacteria:EBBACT00000014932 EnsemblBacteria:EBBACT00000021526
GeneID:1084273 GeneID:2817009 GeneID:2848007 KEGG:ban:BA_2855
KEGG:bar:GBAA_2855 KEGG:bat:BAS2661 OMA:ELLPNKY
ProtClustDB:PRK06848 BioCyc:BANT260799:GJAJ-2725-MONOMER
BioCyc:BANT261594:GJ7F-2820-MONOMER Uniprot:Q81PF4
Length = 143
Score = 124 (48.7 bits), Expect = 5.3e-08, P = 5.3e-08
Identities = 32/85 (37%), Positives = 51/85 (60%)
Query: 34 YSKLQVGAALLCQDDTIFTGCNVENASYG-MTICAEKTAISKAISEGQTKFKRI-AVSAI 91
Y + +G+A+ + I+ +VE A+ G +T+C E AI K+ISEG +F I AV+
Sbjct: 28 YGRHHIGSAVRTKTGNIYAAVHVE-ANVGRITVCGEAMAIGKSISEGDHEFDTIVAVAHP 86
Query: 92 LP--DSNK--FVSPCGSCRQVIAEF 112
P D K V+PCG CR++I+++
Sbjct: 87 HPHEDIEKCWVVAPCGMCRELISDY 111
>TIGR_CMR|BA_2855 [details] [associations]
symbol:BA_2855 "cytidine and deoxycytidylate deaminase
family protein" species:198094 "Bacillus anthracis str. Ames"
[GO:0008150 "biological_process" evidence=ND] [GO:0016814
"hydrolase activity, acting on carbon-nitrogen (but not peptide)
bonds, in cyclic amidines" evidence=ISS] InterPro:IPR002125
InterPro:IPR016192 InterPro:IPR016193 Pfam:PF00383 PROSITE:PS00903
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0008270
SUPFAM:SSF53927 GO:GO:0008152 GO:GO:0016787 KO:K01489
HOGENOM:HOG000014707 HSSP:P19079 RefSeq:NP_845197.1
RefSeq:YP_019497.1 RefSeq:YP_028920.1 ProteinModelPortal:Q81PF4
DNASU:1084273 EnsemblBacteria:EBBACT00000012331
EnsemblBacteria:EBBACT00000014932 EnsemblBacteria:EBBACT00000021526
GeneID:1084273 GeneID:2817009 GeneID:2848007 KEGG:ban:BA_2855
KEGG:bar:GBAA_2855 KEGG:bat:BAS2661 OMA:ELLPNKY
ProtClustDB:PRK06848 BioCyc:BANT260799:GJAJ-2725-MONOMER
BioCyc:BANT261594:GJ7F-2820-MONOMER Uniprot:Q81PF4
Length = 143
Score = 124 (48.7 bits), Expect = 5.3e-08, P = 5.3e-08
Identities = 32/85 (37%), Positives = 51/85 (60%)
Query: 34 YSKLQVGAALLCQDDTIFTGCNVENASYG-MTICAEKTAISKAISEGQTKFKRI-AVSAI 91
Y + +G+A+ + I+ +VE A+ G +T+C E AI K+ISEG +F I AV+
Sbjct: 28 YGRHHIGSAVRTKTGNIYAAVHVE-ANVGRITVCGEAMAIGKSISEGDHEFDTIVAVAHP 86
Query: 92 LP--DSNK--FVSPCGSCRQVIAEF 112
P D K V+PCG CR++I+++
Sbjct: 87 HPHEDIEKCWVVAPCGMCRELISDY 111
>TAIR|locus:2134373 [details] [associations]
symbol:AT4G29620 species:3702 "Arabidopsis thaliana"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0004126
"cytidine deaminase activity" evidence=IEA;ISS] [GO:0005575
"cellular_component" evidence=ND] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0009972 "cytidine deamination" evidence=IEA;ISS]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR002125
InterPro:IPR006263 InterPro:IPR013171 InterPro:IPR016192
InterPro:IPR016193 Pfam:PF00383 Pfam:PF08211 PIRSF:PIRSF006334
PROSITE:PS00903 EMBL:CP002687 GO:GO:0046872 GO:GO:0008270
GO:GO:0004126 SUPFAM:SSF53927 EMBL:AL161575 EMBL:AL079344
TIGRFAMs:TIGR01355 EMBL:AF121877 EMBL:DQ446882 EMBL:AJ005811
IPI:IPI00530654 PIR:T09925 RefSeq:NP_194691.1 UniGene:At.79
HSSP:P13652 ProteinModelPortal:O65571 SMR:O65571
EnsemblPlants:AT4G29620.1 GeneID:829083 KEGG:ath:AT4G29620
TAIR:At4g29620 InParanoid:O65571 OMA:ARAPISK PhylomeDB:O65571
ProtClustDB:PLN02182 ArrayExpress:O65571 Genevestigator:O65571
Uniprot:O65571
Length = 337
Score = 117 (46.2 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 45/157 (28%), Positives = 76/157 (48%)
Query: 13 DPIEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGM--TICAEKT 70
DPI L NL +A A P SK +VGA ++ G NV+ + +I AE+
Sbjct: 44 DPIR--LPNLIRKAMCLARAPISKYKVGAVGRASSGRVYLGVNVDFPGLPLHHSIHAEQF 101
Query: 71 AISKAISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQ 130
++ + ++AV AI D +F +PCG+C Q + E S+ A D+++L + +
Sbjct: 102 LVTNLALNYEKDLCKLAV-AISTDGLEFGTPCGNCLQFLMEMSN-ALDMKIL--SKPKHE 157
Query: 131 VGLITIDGMYLTLHCCWERGNLVLPDPK---LTISGN 164
G + + L L +G+ L + + LT+SG+
Sbjct: 158 AG--SFSSLRLLLPNVLPKGSPFLLEKRYNCLTLSGS 192
>TAIR|locus:2134358 [details] [associations]
symbol:AT4G29610 species:3702 "Arabidopsis thaliana"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0004126
"cytidine deaminase activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0009972 "cytidine deamination" evidence=IEA;ISS]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR002125
InterPro:IPR006263 InterPro:IPR013171 InterPro:IPR016193
Pfam:PF00383 Pfam:PF08211 PIRSF:PIRSF006334 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0046872 GO:GO:0008270 GO:GO:0004126
SUPFAM:SSF53927 EMBL:AL161575 EMBL:AL079344 eggNOG:COG0295
TIGRFAMs:TIGR01355 HSSP:P13652 HOGENOM:HOG000218616 IPI:IPI00539716
PIR:T09924 RefSeq:NP_194690.1 UniGene:At.54547
ProteinModelPortal:Q9SU86 SMR:Q9SU86 PaxDb:Q9SU86 PRIDE:Q9SU86
EnsemblPlants:AT4G29610.1 GeneID:829082 KEGG:ath:AT4G29610
TAIR:At4g29610 InParanoid:Q9SU86 OMA:FNEITEV PhylomeDB:Q9SU86
ArrayExpress:Q9SU86 Genevestigator:Q9SU86 Uniprot:Q9SU86
Length = 293
Score = 115 (45.5 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 37/108 (34%), Positives = 49/108 (45%)
Query: 18 NLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVE--NASYGMTICAEKTAISKA 75
+L L +A A P S +VGA L +F G NVE N TI AE+ ++
Sbjct: 20 DLPKLIDKAMSLARAPVSTFKVGAVGLTSSGEVFLGVNVEFPNLPLHHTIHAEQFLVTNL 79
Query: 76 ISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLI 123
K IAVS F +PCG CRQ E + A +I++LI
Sbjct: 80 ALNSMKKLTHIAVSVT---GTIFGAPCGHCRQFYQEMRN-APEIEILI 123
>UNIPROTKB|Q9KSM5 [details] [associations]
symbol:cdd "Cytidine deaminase" species:243277 "Vibrio
cholerae O1 biovar El Tor str. N16961" [GO:0004126 "cytidine
deaminase activity" evidence=ISS] [GO:0008655
"pyrimidine-containing compound salvage" evidence=ISS]
HAMAP:MF_01558 InterPro:IPR002125 InterPro:IPR006263
InterPro:IPR013171 InterPro:IPR016192 InterPro:IPR016193
InterPro:IPR020797 Pfam:PF00383 Pfam:PF08211 PIRSF:PIRSF006334
PROSITE:PS00903 GO:GO:0046872 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0008270 GO:GO:0004126
SUPFAM:SSF53927 eggNOG:COG0295 KO:K01489 GO:GO:0008655 OMA:NRSHAPY
ProtClustDB:PRK09027 PANTHER:PTHR11644:SF12 TIGRFAMs:TIGR01355
PIR:G82226 RefSeq:NP_230876.1 PDB:4EG2 PDBsum:4EG2
ProteinModelPortal:Q9KSM5 DNASU:2614668 GeneID:2614668
KEGG:vch:VC1231 PATRIC:20081548 Uniprot:Q9KSM5
Length = 295
Score = 115 (45.5 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 39/122 (31%), Positives = 62/122 (50%)
Query: 6 IMEFSALDPIEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVE--NASYGM 63
++ S L+ + +A L I A +Y P S+ VGA + ++ G N+E A G
Sbjct: 41 LLTLSGLEDADLRVALLPIAAA-YSYAPISEFYVGAIVRGISGRLYLGANMEFTGAQLGQ 99
Query: 64 TICAEKTAISKAISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLI 123
T+ AE+ AIS A +G+ K +A I F SPCG CRQ + E ++ A +++ +
Sbjct: 100 TVHAEQCAISHAWMKGE---KGVADITI-----NF-SPCGHCRQFMNELTT-ASSLKIQL 149
Query: 124 VK 125
K
Sbjct: 150 PK 151
>TIGR_CMR|VC_1231 [details] [associations]
symbol:VC_1231 "cytidine deaminase" species:686 "Vibrio
cholerae O1 biovar El Tor" [GO:0004126 "cytidine deaminase
activity" evidence=ISS] [GO:0008655 "pyrimidine-containing compound
salvage" evidence=ISS] HAMAP:MF_01558 InterPro:IPR002125
InterPro:IPR006263 InterPro:IPR013171 InterPro:IPR016192
InterPro:IPR016193 InterPro:IPR020797 Pfam:PF00383 Pfam:PF08211
PIRSF:PIRSF006334 PROSITE:PS00903 GO:GO:0046872 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0008270 GO:GO:0004126
SUPFAM:SSF53927 eggNOG:COG0295 KO:K01489 GO:GO:0008655 OMA:NRSHAPY
ProtClustDB:PRK09027 PANTHER:PTHR11644:SF12 TIGRFAMs:TIGR01355
PIR:G82226 RefSeq:NP_230876.1 PDB:4EG2 PDBsum:4EG2
ProteinModelPortal:Q9KSM5 DNASU:2614668 GeneID:2614668
KEGG:vch:VC1231 PATRIC:20081548 Uniprot:Q9KSM5
Length = 295
Score = 115 (45.5 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 39/122 (31%), Positives = 62/122 (50%)
Query: 6 IMEFSALDPIEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVE--NASYGM 63
++ S L+ + +A L I A +Y P S+ VGA + ++ G N+E A G
Sbjct: 41 LLTLSGLEDADLRVALLPIAAA-YSYAPISEFYVGAIVRGISGRLYLGANMEFTGAQLGQ 99
Query: 64 TICAEKTAISKAISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLI 123
T+ AE+ AIS A +G+ K +A I F SPCG CRQ + E ++ A +++ +
Sbjct: 100 TVHAEQCAISHAWMKGE---KGVADITI-----NF-SPCGHCRQFMNELTT-ASSLKIQL 149
Query: 124 VK 125
K
Sbjct: 150 PK 151
>TAIR|locus:2134338 [details] [associations]
symbol:AT4G29600 species:3702 "Arabidopsis thaliana"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0004126
"cytidine deaminase activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0009972 "cytidine deamination" evidence=IEA;ISS]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR002125
InterPro:IPR006263 InterPro:IPR013171 InterPro:IPR016193
Pfam:PF00383 Pfam:PF08211 PIRSF:PIRSF006334 EMBL:CP002687
GO:GO:0046872 GO:GO:0008270 GO:GO:0004126 SUPFAM:SSF53927
EMBL:AL161575 EMBL:AL079344 TIGRFAMs:TIGR01355 HSSP:P13652
IPI:IPI00539525 PIR:T09923 RefSeq:NP_194689.1 UniGene:At.54546
ProteinModelPortal:Q9SU87 SMR:Q9SU87 EnsemblPlants:AT4G29600.1
GeneID:829081 KEGG:ath:AT4G29600 OMA:SKHEAEG ArrayExpress:Q9SU87
Genevestigator:Q9SU87 Uniprot:Q9SU87
Length = 307
Score = 114 (45.2 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 38/122 (31%), Positives = 60/122 (49%)
Query: 13 DPIEQNLANLSIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGM--TICAEKT 70
+PI L L +A A P SK +VGA ++ G NVE + +I E+
Sbjct: 23 EPIR--LPKLIRKAMSLARGPISKYKVGAVGRASSGRVYLGVNVEFPGLPLHHSIHPEQF 80
Query: 71 AISKAISEGQTKFKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQ 130
++ + +++AV AI D +F +PCG+CRQ + E S+ DI++L+ KS
Sbjct: 81 LVTNLALNSEKGLRQLAV-AISSDCIEFGAPCGNCRQFLMETSNEL-DIKILL-KSKHEA 137
Query: 131 VG 132
G
Sbjct: 138 EG 139
>TAIR|locus:2134403 [details] [associations]
symbol:AT4G29640 species:3702 "Arabidopsis thaliana"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0004126
"cytidine deaminase activity" evidence=IEA;ISS] [GO:0005575
"cellular_component" evidence=ND] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0009972 "cytidine deamination" evidence=IEA;ISS]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR002125
InterPro:IPR006263 InterPro:IPR013171 InterPro:IPR016192
InterPro:IPR016193 Pfam:PF00383 Pfam:PF08211 PIRSF:PIRSF006334
PROSITE:PS00903 EMBL:CP002687 GO:GO:0046872 GO:GO:0008270
GO:GO:0004126 SUPFAM:SSF53927 EMBL:AL161575 EMBL:AL079344
eggNOG:COG0295 TIGRFAMs:TIGR01355 EMBL:AF121877 HSSP:P13652
IPI:IPI00537315 PIR:T09927 RefSeq:NP_194693.1 UniGene:At.54549
ProteinModelPortal:Q9S7L8 SMR:Q9S7L8 PaxDb:Q9S7L8 PRIDE:Q9S7L8
EnsemblPlants:AT4G29640.1 GeneID:829085 KEGG:ath:AT4G29640
TAIR:At4g29640 InParanoid:Q9S7L8 OMA:KIAAPNC PhylomeDB:Q9S7L8
ProtClustDB:CLSN2915818 ArrayExpress:Q9S7L8 Genevestigator:Q9S7L8
Uniprot:Q9S7L8
Length = 346
Score = 113 (44.8 bits), Expect = 5.4e-05, P = 5.4e-05
Identities = 25/118 (21%), Positives = 60/118 (50%)
Query: 23 SIQARDNAYCPYSKLQVGAALLCQDDTIFTGCNVENASYGMTICAEKTAISKAISEGQTK 82
+++A + +Y PY K G AL C+ + ++ G +E +++ + A+ I+ G+ K
Sbjct: 192 ALKAANKSYAPYRKCPSGVALFCEGE-VYAGWYIETVDRTISLGPVQAALVDFIARGEGK 250
Query: 83 -FKRIAVSAILPDSNKFVSPCGSCRQVIAEFSSPACDIQVLIVKSDRSQ--VGLITID 137
F +I + ++ + V + R+++ + ++P CD +V + +R G + ++
Sbjct: 251 GFDKITGAVLVEKKDAKVGQEDTARKLLEKIAAPNCDFKVFHCQEERKDWITGAVLVE 308
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.135 0.404 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 166 166 0.00097 107 3 11 22 0.37 32
30 0.46 34
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 34
No. of states in DFA: 585 (62 KB)
Total size of DFA: 147 KB (2089 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:01
No. of threads or processors used: 24
Search cpu time: 13.60u 0.08s 13.68t Elapsed: 00:00:14
Total cpu time: 13.60u 0.08s 13.68t Elapsed: 00:00:15
Start: Thu Aug 15 12:29:14 2013 End: Thu Aug 15 12:29:29 2013