Query psy2497
Match_columns 331
No_of_seqs 310 out of 2309
Neff 6.6
Searched_HMMs 29240
Date Fri Aug 16 17:43:07 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy2497.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/2497hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1ci0_A Protein (PNP oxidase); 100.0 2.2E-52 7.4E-57 382.8 22.1 214 6-234 11-228 (228)
2 1nrg_A Pyridoxine 5'-phosphate 100.0 3.6E-50 1.2E-54 374.2 22.3 227 6-234 31-261 (261)
3 2a2j_A Pyridoxamine 5'-phospha 100.0 3.3E-50 1.1E-54 371.1 20.3 200 8-209 34-236 (246)
4 1dnl_A Pyridoxine 5'-phosphate 100.0 1E-47 3.6E-52 345.3 21.0 198 22-234 2-199 (199)
5 1ty9_A Phenazine biosynthesis 100.0 1.6E-46 5.4E-51 342.9 20.9 212 4-234 11-222 (222)
6 2i51_A Uncharacterized conserv 100.0 3E-39 1E-43 289.3 14.3 181 31-234 2-195 (195)
7 2ou5_A Pyridoxamine 5'-phospha 100.0 8E-33 2.7E-37 243.6 15.2 148 48-234 24-175 (175)
8 1ci0_A Protein (PNP oxidase); 100.0 4.1E-30 1.4E-34 235.2 9.9 119 197-331 66-185 (228)
9 2a2j_A Pyridoxamine 5'-phospha 100.0 2.1E-29 7.2E-34 232.3 9.0 118 198-331 90-207 (246)
10 1nrg_A Pyridoxine 5'-phosphate 99.9 3.7E-27 1.3E-31 219.3 9.8 117 198-331 89-205 (261)
11 1dnl_A Pyridoxine 5'-phosphate 99.9 1.4E-26 4.9E-31 207.6 9.1 118 197-331 41-158 (199)
12 1ty9_A Phenazine biosynthesis 99.9 1.5E-25 5.1E-30 204.3 11.1 115 198-331 67-181 (222)
13 3dmb_A Putative general stress 99.9 1.6E-22 5.3E-27 172.5 10.9 123 51-207 18-143 (147)
14 2qea_A Putative general stress 99.9 6.5E-22 2.2E-26 170.8 10.9 125 50-209 14-142 (160)
15 2re7_A Uncharacterized protein 99.9 2.2E-21 7.5E-26 161.3 12.8 114 51-196 17-133 (134)
16 2ig6_A NIMC/NIMA family protei 99.8 1.5E-20 5E-25 160.9 12.4 115 51-199 29-144 (150)
17 2hhz_A Pyridoxamine 5'-phospha 99.8 6.3E-20 2.2E-24 155.9 15.6 118 51-199 13-132 (150)
18 3u35_A General stress protein; 99.8 3.7E-21 1.3E-25 170.2 7.8 124 51-209 37-164 (182)
19 2i02_A General stress protein 99.8 6.5E-20 2.2E-24 155.0 12.4 118 50-199 20-140 (148)
20 2iab_A Hypothetical protein; N 99.8 1.2E-19 4E-24 155.9 13.3 125 50-208 22-147 (155)
21 2hq7_A Protein, related to gen 99.8 9.4E-19 3.2E-23 147.0 11.3 115 51-198 17-134 (146)
22 2i51_A Uncharacterized conserv 99.8 8.9E-20 3E-24 162.9 4.3 109 198-331 35-154 (195)
23 3ec6_A General stress protein 99.8 2.8E-18 9.7E-23 143.9 12.7 113 51-198 14-130 (139)
24 3db0_A LIN2891 protein; putati 99.7 1.2E-17 4.2E-22 137.6 13.0 111 51-195 16-127 (128)
25 2fhq_A Putative general stress 99.7 1.8E-16 6.3E-21 132.2 14.2 112 51-196 19-132 (141)
26 1vl7_A Hypothetical protein AL 99.7 1.3E-16 4.4E-21 136.7 10.3 77 50-126 28-111 (157)
27 2ou5_A Pyridoxamine 5'-phospha 99.7 2.3E-17 7.9E-22 144.8 2.6 88 198-305 40-130 (175)
28 2asf_A Hypothetical protein RV 99.6 4.4E-15 1.5E-19 124.0 15.5 112 50-196 19-132 (137)
29 3f7e_A Pyridoxamine 5'-phospha 99.6 1.2E-14 4.2E-19 120.2 12.0 114 51-195 14-130 (131)
30 3ba3_A Protein LP_0091, pyrido 99.6 6.1E-15 2.1E-19 125.7 10.1 114 51-197 13-135 (145)
31 1rfe_A Hypothetical protein RV 99.6 8.4E-14 2.9E-18 118.7 15.8 123 52-198 22-148 (162)
32 2aq6_A Pyridoxine 5'-phosphate 99.5 1.8E-13 6.1E-18 114.7 12.8 75 51-126 16-92 (147)
33 2htd_A Predicted flavin-nucleo 99.4 5.3E-13 1.8E-17 112.5 10.3 74 53-126 39-113 (140)
34 2q9k_A Uncharacterized protein 99.3 3.3E-12 1.1E-16 109.3 10.3 73 51-125 20-94 (151)
35 3tgv_A Heme-binding protein HU 99.3 5.9E-12 2E-16 107.1 11.3 75 51-126 13-94 (148)
36 2arz_A Hypothetical protein PA 99.3 2E-11 7E-16 111.7 15.0 116 51-197 18-141 (247)
37 3cp3_A Uncharacterized protein 99.3 4E-11 1.4E-15 101.4 12.2 109 51-197 26-140 (148)
38 2fg9_A 5-nitroimidazole antibi 99.2 1.2E-10 4.1E-15 101.7 13.5 83 34-126 29-126 (178)
39 3swj_A CHUZ, putative uncharac 99.2 3.2E-10 1.1E-14 104.8 14.7 116 51-196 97-223 (251)
40 2hti_A BH0577 protein; structu 99.2 5.6E-10 1.9E-14 97.8 14.8 82 34-126 16-110 (185)
41 1xhn_A CREG, cellular represso 99.0 2.8E-09 9.4E-14 93.5 12.6 117 51-197 29-167 (184)
42 2fur_A Hypothetical protein; s 99.0 2.5E-09 8.7E-14 95.7 12.1 82 34-126 23-117 (209)
43 3u5w_A Putative uncharacterize 99.0 4.1E-09 1.4E-13 89.4 12.7 73 51-126 21-96 (148)
44 2hq9_A MLL6688 protein; struct 99.0 1.4E-09 4.8E-14 91.6 9.8 74 51-127 18-94 (149)
45 3gas_A Heme oxygenase; FMN-bin 99.0 6E-09 2.1E-13 96.6 13.1 117 51-197 97-224 (259)
46 2vpa_A NIMA-related protein; c 98.9 5.7E-09 1.9E-13 94.1 11.4 80 34-123 46-144 (216)
47 3dnh_A Uncharacterized protein 98.9 1.4E-08 4.7E-13 94.0 13.6 115 51-196 38-159 (258)
48 3fkh_A Putative pyridoxamine 5 98.9 1.6E-08 5.4E-13 85.2 12.0 73 51-126 20-94 (138)
49 2ig6_A NIMC/NIMA family protei 98.9 2.1E-09 7.1E-14 91.4 6.0 79 198-293 40-119 (150)
50 2qea_A Putative general stress 98.8 7.9E-09 2.7E-13 88.5 6.0 62 198-275 24-88 (160)
51 3dmb_A Putative general stress 98.7 3.1E-08 1.1E-12 83.7 8.2 55 224-283 45-101 (147)
52 2hhz_A Pyridoxamine 5'-phospha 98.6 5.9E-08 2E-12 81.7 7.4 78 198-291 25-104 (150)
53 3u35_A General stress protein; 98.4 3.1E-07 1.1E-11 80.7 6.8 55 224-283 64-120 (182)
54 2iab_A Hypothetical protein; N 98.4 2.8E-07 9.7E-12 78.3 5.3 61 199-278 37-97 (155)
55 3a6r_A FMN-binding protein; el 98.4 7.5E-07 2.6E-11 73.4 7.2 74 52-126 13-95 (122)
56 2re7_A Uncharacterized protein 98.3 5.2E-07 1.8E-11 74.0 5.5 64 198-277 29-94 (134)
57 2i02_A General stress protein 98.2 1.8E-06 6.2E-11 72.0 6.7 70 198-283 33-105 (148)
58 1vl7_A Hypothetical protein AL 98.2 3E-06 1E-10 71.9 6.5 64 198-277 41-111 (157)
59 3in6_A FMN-binding protein; st 98.1 6.5E-06 2.2E-10 69.8 6.7 69 54-122 32-104 (148)
60 3ec6_A General stress protein 98.0 7.6E-06 2.6E-10 67.7 6.3 70 198-284 25-98 (139)
61 3db0_A LIN2891 protein; putati 98.0 1.1E-05 3.7E-10 65.5 6.4 70 199-285 28-99 (128)
62 2hq7_A Protein, related to gen 97.9 1E-05 3.5E-10 66.9 5.0 65 198-278 29-94 (146)
63 3f7e_A Pyridoxamine 5'-phospha 97.7 2.1E-05 7.1E-10 64.2 4.2 62 198-276 26-88 (131)
64 2htd_A Predicted flavin-nucleo 97.7 3.3E-05 1.1E-09 64.4 5.1 56 223-283 64-119 (140)
65 2ol5_A PAI 2 protein; structur 97.7 0.0014 4.9E-08 58.0 15.3 71 52-125 22-111 (202)
66 2fhq_A Putative general stress 97.5 7.5E-05 2.6E-09 61.2 5.0 68 198-283 31-100 (141)
67 3ba3_A Protein LP_0091, pyrido 97.4 0.00045 1.5E-08 58.4 8.5 77 198-288 24-107 (145)
68 3r5l_A Deazaflavin-dependent n 97.3 0.00097 3.3E-08 54.7 8.9 75 52-133 15-95 (122)
69 2asf_A Hypothetical protein RV 97.2 0.00025 8.5E-09 58.2 4.6 61 198-277 32-94 (137)
70 2aq6_A Pyridoxine 5'-phosphate 97.1 0.00068 2.3E-08 55.8 6.1 63 198-277 28-92 (147)
71 1rfe_A Hypothetical protein RV 96.8 0.0017 5.8E-08 54.3 6.2 64 198-278 33-99 (162)
72 2arz_A Hypothetical protein PA 95.1 0.052 1.8E-06 48.8 7.6 73 198-288 32-115 (247)
73 3h96_A F420-H2 dependent reduc 94.9 0.064 2.2E-06 45.0 7.2 76 52-133 30-113 (143)
74 3r5y_A Putative uncharacterize 94.9 0.047 1.6E-06 46.0 6.2 75 52-133 39-119 (147)
75 2q9k_A Uncharacterized protein 94.9 0.033 1.1E-06 46.8 5.3 49 223-278 48-96 (151)
76 2hq9_A MLL6688 protein; struct 94.8 0.025 8.4E-07 46.7 4.2 50 223-278 42-94 (149)
77 3r5z_A Putative uncharacterize 94.7 0.078 2.7E-06 44.6 7.2 75 52-133 37-117 (145)
78 3tgv_A Heme-binding protein HU 94.7 0.03 1E-06 46.7 4.6 49 223-276 38-93 (148)
79 3cp3_A Uncharacterized protein 94.4 0.045 1.5E-06 45.2 5.1 55 225-285 56-113 (148)
80 3u5w_A Putative uncharacterize 94.1 0.07 2.4E-06 44.4 5.6 49 223-277 45-96 (148)
81 1xhn_A CREG, cellular represso 94.0 0.12 4E-06 44.5 6.9 59 225-288 65-141 (184)
82 2fg9_A 5-nitroimidazole antibi 93.3 0.11 3.8E-06 44.4 5.6 49 224-277 63-126 (178)
83 2hti_A BH0577 protein; structu 92.4 0.18 6.1E-06 43.2 5.7 49 224-277 49-110 (185)
84 3dnh_A Uncharacterized protein 91.8 0.39 1.3E-05 43.7 7.4 60 224-288 66-134 (258)
85 3swj_A CHUZ, putative uncharac 91.2 0.37 1.3E-05 43.8 6.6 50 223-277 122-179 (251)
86 2vpa_A NIMA-related protein; c 90.5 0.22 7.6E-06 44.1 4.3 49 227-280 89-150 (216)
87 2fur_A Hypothetical protein; s 89.8 0.31 1E-05 42.8 4.6 50 223-277 55-117 (209)
88 3fkh_A Putative pyridoxamine 5 84.5 1.6 5.3E-05 35.9 5.6 54 224-283 45-101 (138)
89 3gas_A Heme oxygenase; FMN-bin 62.6 15 0.00053 33.2 6.7 50 223-277 122-179 (259)
90 3a6r_A FMN-binding protein; el 59.1 5.5 0.00019 32.1 2.7 49 224-277 41-95 (122)
91 2ptf_A Uncharacterized protein 58.3 19 0.00064 32.1 6.3 55 53-107 36-90 (233)
92 3in6_A FMN-binding protein; st 54.4 8.4 0.00029 32.2 3.1 37 233-273 65-104 (148)
93 3b5m_A Uncharacterized protein 52.5 12 0.00041 32.6 4.0 52 55-106 7-64 (205)
94 2iml_A Hypothetical protein; F 44.8 35 0.0012 29.5 5.8 55 52-106 14-69 (199)
95 3r5l_A Deazaflavin-dependent n 38.8 44 0.0015 26.7 5.0 36 244-285 61-96 (122)
96 1eje_A FMN-binding protein; st 35.6 82 0.0028 26.5 6.6 56 53-108 28-86 (192)
97 3e4v_A NADH:FMN oxidoreductase 32.4 66 0.0023 27.0 5.5 54 54-107 20-76 (186)
98 2d5m_A Flavoredoxin; flavoprot 31.2 50 0.0017 27.7 4.5 56 53-108 15-73 (190)
99 3bpk_A Nitrilotriacetate monoo 31.2 82 0.0028 26.8 5.9 57 53-109 29-92 (206)
100 2nr4_A Conserved hypothetical 30.4 66 0.0022 28.0 5.2 50 55-106 32-81 (213)
101 3fge_A Putative flavin reducta 26.1 75 0.0026 27.1 4.7 57 53-109 29-91 (203)
102 3r5y_A Putative uncharacterize 21.6 1.3E+02 0.0043 24.8 5.0 37 243-285 84-120 (147)
No 1
>1ci0_A Protein (PNP oxidase); B6 metabolism, structural genomics, PSI, protein structure initiative; HET: FMN; 2.70A {Saccharomyces cerevisiae} SCOP: b.45.1.1
Probab=100.00 E-value=2.2e-52 Score=382.79 Aligned_cols=214 Identities=36% Similarity=0.748 Sum_probs=190.2
Q ss_pred CCChhhhccccccCCcCCCcccccCChHHHHHHHHHHhh-cCCCCCCCceEEEEeec-CCCCeeEEEEEEEEeeCCeEEE
Q psy2497 6 TTDLKDKRVPYKSRNEVLLEKDIVKEPFKLFESWFHEAN-NTPGIIEANAMFIATST-KNGIPSGRMVLLKSYGKNGFVF 83 (331)
Q Consensus 6 ~~~~~~~r~~~~~~~~~~~~~~~~~~P~~~f~~Wl~~A~-~~~~~~e~~~~~LATvd-~dG~P~~R~V~~r~~~~~gl~F 83 (331)
.++++++|++|..+ .|++.+++.||+.+|..||++|. + .++.++++|+||||| +||.|++|+|++++++++||+|
T Consensus 11 ~~~~~~~r~~y~~~--~l~~~~~~~~P~~~f~~wl~~A~~~-~~~~~~~~~~LATvd~~dG~P~~R~V~lk~~d~~g~~F 87 (228)
T 1ci0_A 11 PIIFAPETYQYDKF--TLNEKQLTDDPIDLFTKWFNEAKED-PRETLPEAITFSSAELPSGRVSSRILLFKELDHRGFTI 87 (228)
T ss_dssp -------------C--CCCGGGCCSSHHHHHHHHHHHHHHC-SSCSCTTEEEEEEEETTTTEEEEEEEECCEECSSSEEE
T ss_pred CCChHHHhhhcccC--CCChhhcCCChHHHHHHHHHHHHhh-cCCCCCCEEEEEEeeCCCCCeEEEEEEEEEECCCEEEE
Confidence 56899999999977 69999999999999999999999 6 678899999999999 9999999999999999889999
Q ss_pred EecCC-CcchhhhhcCCcEEEEEEeCCCCeEEEEEEEEEecCCcchhHHHhcCCccccceeecCCCCCCCCCHHHHHHHH
Q psy2497 84 FTNYN-SRKGNELAENPQASLAFYWEPLKRSVRIEGHVEKTSDKESDDYFQSRPYASKIGAIASDQSRPCESRDQMSKIT 162 (331)
Q Consensus 84 ~T~~~-S~K~~eL~~np~val~f~~~~~~~qvri~G~a~~~~~~~~~~~~~~~p~~~~~~~~~s~q~~~i~d~~~l~~~~ 162 (331)
||+.+ |+|++||++||+|+|||+|+...+||||+|+|++++++++++||.++|+++|+++|+|+||++|.+++.|++++
T Consensus 88 ~Tn~~~S~K~~eL~~NP~val~f~~~~~~rqVrI~G~ae~v~~~~~~~yf~~rp~~s~i~awas~qs~~i~~r~~l~~~~ 167 (228)
T 1ci0_A 88 YSNWGTSRKAHDIATNPNAAIVFFWKDLQRQVRVEGITEHVNRETSERYFKTRPRGSKIGAWASRQSDVIKNREELDELT 167 (228)
T ss_dssp EEECSSSHHHHHHHHCCEEEEEEEETTTTEEEEEEEEEEECCHHHHHHHHHHSCHHHHHHHHHCCTTCEESCHHHHHHHH
T ss_pred EeCCCCCcchHHHhhCCeEEEEEEeCCCCEEEEEEEEEEEcCchhhHHHHHhCCHHHhhceeeCCCCcccCCHHHHHHHH
Confidence 99999 99999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcCCCCCCCCCceEEEEEeceEEEeeecCCCCccceEEEeccCCCCCCCCCCCcC-CCCceEeeecC
Q psy2497 163 EELRQKYKEGDYVPRPKHWGGYVVIPKVIEFWQGQSDRVHDRIVFKRPVPGEPLGPHSHEG-EDGWYYERLFP 234 (331)
Q Consensus 163 ~~~~~~~~~~~~~p~P~~~~~l~v~p~~iEfwq~~~~r~h~R~~f~k~~~~~~~~~~~~~~-~~gw~f~tl~p 234 (331)
+++.++|++++.+|+|++|+||+|+|++|||||++.+++|+|++|.+ .. +++|...+++|
T Consensus 168 ~~~~~~f~~~~~~p~p~~w~g~rv~P~~iEfWq~~~~rlHdR~~y~r------------~~~~~~W~~~rL~P 228 (228)
T 1ci0_A 168 QKNTERFKDAEDIPCPDYWGGLRIVPLEIEFWQGRPSRLHDRFVYRR------------KTENDPWKVVRLAP 228 (228)
T ss_dssp HHHHHHTTSCSSCCCCTTEEEEEEEEEEEEEEECCTTSCCEEEEEEC------------SSTTSCCEEEEECC
T ss_pred HHHHHhhcCCCCCCCCCcEEEEEEEccEEEEeeCCCCCcEEEEEEEe------------cCCCCCeEEEEecC
Confidence 99999997665488999999999999999999999999999999998 11 56899999887
No 2
>1nrg_A Pyridoxine 5'-phosphate oxidase; PLP, FMN, oxidoreductase; HET: FMN PLP; 1.95A {Homo sapiens} SCOP: b.45.1.1 PDB: 3hy8_A*
Probab=100.00 E-value=3.6e-50 Score=374.19 Aligned_cols=227 Identities=53% Similarity=0.966 Sum_probs=195.2
Q ss_pred CCChhhhccccccCCcCCCcccc-cCChHHHHHHHHHHhhcCC-CCCCCceEEEEeecCCCCeeEEEEEEEEeeCCeEEE
Q psy2497 6 TTDLKDKRVPYKSRNEVLLEKDI-VKEPFKLFESWFHEANNTP-GIIEANAMFIATSTKNGIPSGRMVLLKSYGKNGFVF 83 (331)
Q Consensus 6 ~~~~~~~r~~~~~~~~~~~~~~~-~~~P~~~f~~Wl~~A~~~~-~~~e~~~~~LATvd~dG~P~~R~V~~r~~~~~gl~F 83 (331)
.+|++++|+.|..+.|.|++.++ +.||+.+|+.||++|.+ . ++.++++|+|||||+||.|++|+|++++++++||+|
T Consensus 31 ~~~~~~~r~~y~~~~~~l~~~~~~~~~P~~~f~~Wl~~A~~-~~~l~e~~~~~LATvd~dG~P~~R~V~lk~~d~~gl~F 109 (261)
T 1nrg_A 31 AMDLGPMRKSYRGDREAFEETHLTSLDPVKQFAAWFEEAVQ-CPDIGEANAMCLATCTRDGKPSARMLLLKGFGKDGFRF 109 (261)
T ss_dssp ------------------CCSSCSCSSHHHHHHHHHHHHHH-CTTCSCTTEEEEEEECTTSCEEEEEEECCCEETTEEEE
T ss_pred cCCHHHHHHhhhcCCCCcCHHHcCCCCHHHHHHHHHHHHHh-hccCCCCcEEEEEEECCCCCeeEEEEEEEEEcCCEEEE
Confidence 56899999999977656999999 89999999999999997 5 788999999999999999999999999999999999
Q ss_pred EecCCCcchhhhhcCCcEEEEEEeCCCCeEEEEEEEEEecCCcchhHHHhcCCccccceeecCCCCCCCCCHHHHHHHHH
Q psy2497 84 FTNYNSRKGNELAENPQASLAFYWEPLKRSVRIEGHVEKTSDKESDDYFQSRPYASKIGAIASDQSRPCESRDQMSKITE 163 (331)
Q Consensus 84 ~T~~~S~K~~eL~~np~val~f~~~~~~~qvri~G~a~~~~~~~~~~~~~~~p~~~~~~~~~s~q~~~i~d~~~l~~~~~ 163 (331)
||+.+|+|++||++||+|+|+|+|+...+||||+|+|++++++++++||.++|+++|+++|+++||++|.+++.++++..
T Consensus 110 ~Tn~~S~K~~eL~~NP~vaL~f~~~~~~rqVrI~G~ae~v~d~e~~~~w~srp~~s~i~awas~Qs~~i~~r~~l~~~~~ 189 (261)
T 1nrg_A 110 FTNFESRKGKELDSNPFASLVFYWEPLNRQVRVEGPVKKLPEEEAECYFHSRPKSSQIGAVVSHQSSVIPDREYLRKKNE 189 (261)
T ss_dssp EEETTSHHHHHHHHSCEEEEEEEEGGGTEEEEEEEEEEECCHHHHHHHHHHSCHHHHHHHHHCCTTSCCSCHHHHHHHHH
T ss_pred EECCCChhHHHHhhCCeEEEEEEeCCCCEEEEEEEEEEEecCcchHHHHhcCChhhhhhhhcCCCCCccCCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred HHHHhhcCCCCCCCCCceEEEEEeceEEEeeecCCCCccceEEEeccC-C-CCCCCCCCCcCCCCceEeeecC
Q psy2497 164 ELRQKYKEGDYVPRPKHWGGYVVIPKVIEFWQGQSDRVHDRIVFKRPV-P-GEPLGPHSHEGEDGWYYERLFP 234 (331)
Q Consensus 164 ~~~~~~~~~~~~p~P~~~~~l~v~p~~iEfwq~~~~r~h~R~~f~k~~-~-~~~~~~~~~~~~~gw~f~tl~p 234 (331)
++.++|++++ +|+|++|+||+|+|++|||||+..+++|+|++|.+.. . .+.+|.+.+..+++|...+++|
T Consensus 190 ~~~~~f~~~~-vp~p~~w~g~rv~P~~vEfwq~~~~rlHdR~~y~r~~~~~~~~~~~~~~~~~~~W~~~rL~P 261 (261)
T 1nrg_A 190 ELEQLYQDQE-VPKPKSWGGYVLYPQVMEFWQGQTNRLHDRIVFRRGLPTGDSPLGPMTHRGEEDWLYERLAP 261 (261)
T ss_dssp HHHHHTTTSC-CCCCTTEEEEEECCSEEEEEECCTTSCCEEEEEEECSSTTSCCCCTTCEECSTTEEEEECCC
T ss_pred HHHhhcccCC-CCCCCcEEEEEEEccEEEEEECCCCCCeEEEEEEECCccccccccccccCCCCCeEEEEccC
Confidence 9999998765 8999999999999999999999999999999999832 1 2266777777677899999987
No 3
>2a2j_A Pyridoxamine 5'-phosphate oxidase; beta barrel, structural genomics, mycobacterium tuberculosis structural proteomics project, XMTB; HET: CME; 2.50A {Mycobacterium tuberculosis} SCOP: b.45.1.1
Probab=100.00 E-value=3.3e-50 Score=371.14 Aligned_cols=200 Identities=37% Similarity=0.655 Sum_probs=179.7
Q ss_pred ChhhhccccccCC---cCCCcccccCChHHHHHHHHHHhhcCCCCCCCceEEEEeecCCCCeeEEEEEEEEeeCCeEEEE
Q psy2497 8 DLKDKRVPYKSRN---EVLLEKDIVKEPFKLFESWFHEANNTPGIIEANAMFIATSTKNGIPSGRMVLLKSYGKNGFVFF 84 (331)
Q Consensus 8 ~~~~~r~~~~~~~---~~~~~~~~~~~P~~~f~~Wl~~A~~~~~~~e~~~~~LATvd~dG~P~~R~V~~r~~~~~gl~F~ 84 (331)
|++++|++|.... ..|++.+++.||+.+|..||++|++ .++.++++|+||||| +|.|++|+|++++++++|||||
T Consensus 34 ~~~~~r~~y~~~~~~~~~l~~~~~~~~P~~~f~~Wl~~A~~-~~~~e~~~~~LATvd-dG~P~~R~Vllk~~d~~gl~F~ 111 (246)
T 2a2j_A 34 QLARMRGEYGPEKDGCGDLDFDWLDDGWLTLLRRWLNDAQR-AGVSEPNAMVLATVA-DGKPVTRSVLCKILDESGVAFF 111 (246)
T ss_dssp ----------CTTTSCCCCCGGGGTTHHHHHHHHHHHHHHH-TTCSSTTEEEEEEEE-TTEEEEEEEEEEEEETTEEEEE
T ss_pred cHHHHHHhhhccccccCCcChhhcCCCHHHHHHHHHHHHHh-ccCCCCceEEEEEcC-CCceEEEEEEEEEEcCCEEEEE
Confidence 7999999998711 3689999999999999999999997 688899999999999 9999999999999998899999
Q ss_pred ecCCCcchhhhhcCCcEEEEEEeCCCCeEEEEEEEEEecCCcchhHHHhcCCccccceeecCCCCCCCCCHHHHHHHHHH
Q psy2497 85 TNYNSRKGNELAENPQASLAFYWEPLKRSVRIEGHVEKTSDKESDDYFQSRPYASKIGAIASDQSRPCESRDQMSKITEE 164 (331)
Q Consensus 85 T~~~S~K~~eL~~np~val~f~~~~~~~qvri~G~a~~~~~~~~~~~~~~~p~~~~~~~~~s~q~~~i~d~~~l~~~~~~ 164 (331)
|+.+|+|++||++||+|+|||+|+...+||||+|+|++++++++++||.++|+++|+++|+|+||++|.+++.|+++++.
T Consensus 112 Tn~~S~K~~eL~~NP~vaL~f~~~~~~rqVrI~G~ae~v~~~es~~yf~srp~~sqi~awas~QS~~i~~r~~L~~~~~~ 191 (246)
T 2a2j_A 112 TSYTSAKGEQLAVTPYASATFPWYQLGRQAHVQGPVSKVSTEEIFTYWSMRPRGAQLGAWASQQSRPVGSRAQLDNQLAE 191 (246)
T ss_dssp EETTSHHHHHHHHSCEEEEEEEEGGGTEEEEEEEEEEECCHHHHHHHHHHSCHHHHHHHHHSCTTCCCCCSHHHHHHHHH
T ss_pred EcCCChhhHHHhhCCeEEEEEEeCCCCEEEEEEEEEEEeccHhHHHHHHhCCHhhhceEEeCCCCcccCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcCCCCCCCCCceEEEEEeceEEEeeecCCCCccceEEEec
Q psy2497 165 LRQKYKEGDYVPRPKHWGGYVVIPKVIEFWQGQSDRVHDRIVFKR 209 (331)
Q Consensus 165 ~~~~~~~~~~~p~P~~~~~l~v~p~~iEfwq~~~~r~h~R~~f~k 209 (331)
+.++|++++.+|+|++|+||+|+|++|||||++.+++|+|++|.+
T Consensus 192 ~~~~f~~~~~vp~pp~w~g~rv~P~~iEfWqg~~~rlHdR~~y~r 236 (246)
T 2a2j_A 192 VTRRFADQDQIPVPPGWGGYRIAPEIVEFWQGRENRMHNRIRVAN 236 (246)
T ss_dssp HHHHHTTCSSCCCCTTEEEEEECCSEEEEEECCTTSCCEEEEEET
T ss_pred HHHhcccCCCCCCCCcEEEEEEEcCEEEEccCCCCCCeEEEEEEC
Confidence 888897662389999999999999999999999999999999974
No 4
>1dnl_A Pyridoxine 5'-phosphate oxidase; beta barrel, protein-FMN complex, oxidoreductase; HET: MSE FMN; 1.80A {Escherichia coli K12} SCOP: b.45.1.1 PDB: 1g79_A* 1g76_A* 1g78_A* 1g77_A* 1jnw_A* 1wv4_A*
Probab=100.00 E-value=1e-47 Score=345.27 Aligned_cols=198 Identities=41% Similarity=0.773 Sum_probs=187.7
Q ss_pred CCCcccccCChHHHHHHHHHHhhcCCCCCCCceEEEEeecCCCCeeEEEEEEEEeeCCeEEEEecCCCcchhhhhcCCcE
Q psy2497 22 VLLEKDIVKEPFKLFESWFHEANNTPGIIEANAMFIATSTKNGIPSGRMVLLKSYGKNGFVFFTNYNSRKGNELAENPQA 101 (331)
Q Consensus 22 ~~~~~~~~~~P~~~f~~Wl~~A~~~~~~~e~~~~~LATvd~dG~P~~R~V~~r~~~~~gl~F~T~~~S~K~~eL~~np~v 101 (331)
.|++.+++.||+.+|+.||++|.+ .++.++++|+|||||+||.|++|+|+++.++++||+|||+.+|+|++||++||+|
T Consensus 2 ~~~~~~~~~~p~~~f~~wl~~a~~-~~~~~~~~~~LATv~~dG~P~~R~v~~~~~d~~gl~F~T~~~S~K~~~L~~np~v 80 (199)
T 1dnl_A 2 GLRRRDLPADPLTLFERWLSQACE-AKLADPTAMVVATVDEHGQPYQRIVLLKHYDEKGMVFYTNLGSRKAHQIENNPRV 80 (199)
T ss_dssp CCCGGGCCSSHHHHHHHHHHHHHH-TTCSCTTEEEEEEECTTSCEEEEEEECCEEETTEEEEEEETTSHHHHHHHHCCEE
T ss_pred CCChhhcCCChHHHHHHHHHHHHH-cCcCCCcEEEEEEECCCCCEEEEEEEEEEEcCCEEEEEECCCCHHHHHHhhCCeE
Confidence 377889999999999999999997 6888999999999999999999999999999889999999999999999999999
Q ss_pred EEEEEeCCCCeEEEEEEEEEecCCcchhHHHhcCCccccceeecCCCCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCCce
Q psy2497 102 SLAFYWEPLKRSVRIEGHVEKTSDKESDDYFQSRPYASKIGAIASDQSRPCESRDQMSKITEELRQKYKEGDYVPRPKHW 181 (331)
Q Consensus 102 al~f~~~~~~~qvri~G~a~~~~~~~~~~~~~~~p~~~~~~~~~s~q~~~i~d~~~l~~~~~~~~~~~~~~~~~p~P~~~ 181 (331)
+|||+|+...+||+|+|+|++++++++++||.++|+++|+++|+|+||++|.+++.|+++...+.++|++++ +|+|++|
T Consensus 81 ~l~f~~~~~~~qvri~G~a~~v~d~~~~~~w~~~p~~s~~~aw~s~qs~~i~~r~~l~~~~~~~~~~~~~~~-~p~p~~~ 159 (199)
T 1dnl_A 81 SLLFPWHTLERQVMVIGKAERLSTLEVMKYFHSRPRDSQIGAWVSKQSSRISARGILESKFLELKQKFQQGE-VPLPSFW 159 (199)
T ss_dssp EEEECCGGGTEEEEEEEEEEECCHHHHHHHHTTSCHHHHHHHHHCCTTSCCSCTHHHHHHHHHHHHHSTTSS-CCCCTTE
T ss_pred EEEEEcCCCCEEEEEEEEEEEeCCccHHHHHHhCChhhhcccccCCCCcccCCHHHHHHHHHHHHhhccCCC-CCCCCce
Confidence 999999999999999999999999999999999999999999999999999999999999999999997665 8899999
Q ss_pred EEEEEeceEEEeeecCCCCccceEEEeccCCCCCCCCCCCcCCCCceEeeecC
Q psy2497 182 GGYVVIPKVIEFWQGQSDRVHDRIVFKRPVPGEPLGPHSHEGEDGWYYERLFP 234 (331)
Q Consensus 182 ~~l~v~p~~iEfwq~~~~r~h~R~~f~k~~~~~~~~~~~~~~~~gw~f~tl~p 234 (331)
+||+|+|++||||+++.+++|+|++|.+ ++++|...+++|
T Consensus 160 ~~~~v~p~~vefw~~~~~rlh~R~~y~~-------------~~~~W~~~~l~P 199 (199)
T 1dnl_A 160 GGFRVSLEQIEFWQGGEHRLHDRFLYQR-------------ENDAWKIDRLAP 199 (199)
T ss_dssp EEEEECCSEEEEEECCGGGCCEEEEEEE-------------CSSSEEEEECCC
T ss_pred EEEEEECCEEEEEecCCCCCceEEEEEE-------------CCCCEEEEEecC
Confidence 9999999999999999999999999998 456799998876
No 5
>1ty9_A Phenazine biosynthesis protein PHZG; chorismate, oxidoreductase; HET: FMN; 1.80A {Pseudomonas fluorescens} SCOP: b.45.1.1 PDB: 1t9m_A*
Probab=100.00 E-value=1.6e-46 Score=342.86 Aligned_cols=212 Identities=27% Similarity=0.511 Sum_probs=184.7
Q ss_pred cCCCChhhhccccccCCcCCCcccccCChHHHHHHHHHHhhcCCCCCCCceEEEEeecCCCCeeEEEEEEEEeeCCeEEE
Q psy2497 4 ESTTDLKDKRVPYKSRNEVLLEKDIVKEPFKLFESWFHEANNTPGIIEANAMFIATSTKNGIPSGRMVLLKSYGKNGFVF 83 (331)
Q Consensus 4 ~~~~~~~~~r~~~~~~~~~~~~~~~~~~P~~~f~~Wl~~A~~~~~~~e~~~~~LATvd~dG~P~~R~V~~r~~~~~gl~F 83 (331)
|..|++..+|..|..+.|. ..+++.||+.+|+.||++|.+ .++.++++|+|||||+||.|++|+|+++++++++|+|
T Consensus 11 ~~~~~~~~~~~~~~~~~~~--~~~~~~~P~~~f~~Wl~~A~~-~~~~~~~~~~LATvd~dG~P~~R~v~l~~~d~~gl~F 87 (222)
T 1ty9_A 11 LGKGMSESLTGTLDAPFPE--YQTLPADPMSVLHNWLERARR-VGIREPRALALATADSQGRPSTRIVVISEISDAGVVF 87 (222)
T ss_dssp ----------CCSCCCCTH--HHHCCSCHHHHHHHHHHHHHH-HTCSSTTEEEEEEECTTCCEEEEEEECCEECSSEEEE
T ss_pred ccccchhhhccccccCCCC--hhccCCCHHHHHHHHHHHHHH-hccCCCCEEEEEEECCCCCEEEEEEEEEEEcCCEEEE
Confidence 3456677788888777432 578899999999999999996 6888999999999999999999999999999999999
Q ss_pred EecCCCcchhhhhcCCcEEEEEEeCCCCeEEEEEEEEEecCCcchhHHHhcCCccccceeecCCCCCCCCCHHHHHHHHH
Q psy2497 84 FTNYNSRKGNELAENPQASLAFYWEPLKRSVRIEGHVEKTSDKESDDYFQSRPYASKIGAIASDQSRPCESRDQMSKITE 163 (331)
Q Consensus 84 ~T~~~S~K~~eL~~np~val~f~~~~~~~qvri~G~a~~~~~~~~~~~~~~~p~~~~~~~~~s~q~~~i~d~~~l~~~~~ 163 (331)
||+.+|+|++||++||+|+|||+|+...+||||+|+|++++++++++||+++|+++|+.+|+|+||.++.++..++....
T Consensus 88 ~T~~~S~K~~eL~~nP~val~f~~~~~~rqvrI~G~ae~v~~~~~~~~w~~rp~~s~i~A~as~qs~~~~~~~~l~~~~~ 167 (222)
T 1ty9_A 88 STHAGSQKGRELLHNPWASGVLYWRETSQQIILNGQAVRLPNAKADDAWLKRPYATHPMSSVSRQSEELQDVQAMRNAAR 167 (222)
T ss_dssp EEETTSHHHHHHHHCCEEEEEEEETTTTEEEEEEEEEEECCHHHHHHHHHTSCGGGHHHHHHCCTTSBCCCHHHHHHHHH
T ss_pred EECCCCcchHHHhhCCeEEEEEEcCCCCeEEEEEEEEEEEccHHhHHHHHhCccccccceeeccCCCcCCChHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999987665
Q ss_pred HHHHhhcCCCCCCCCCceEEEEEeceEEEeeecCCCCccceEEEeccCCCCCCCCCCCcCCCCceEeeecC
Q psy2497 164 ELRQKYKEGDYVPRPKHWGGYVVIPKVIEFWQGQSDRVHDRIVFKRPVPGEPLGPHSHEGEDGWYYERLFP 234 (331)
Q Consensus 164 ~~~~~~~~~~~~p~P~~~~~l~v~p~~iEfwq~~~~r~h~R~~f~k~~~~~~~~~~~~~~~~gw~f~tl~p 234 (331)
.+.++ +++ +|+|++|+||+|+|++||||++..+++|+|++|.+ ++++|...+++|
T Consensus 168 ~~~~~--~~~-~p~p~~w~~~rv~P~~vEfwq~~~~rlHdR~~y~~-------------~~~~W~~~rL~P 222 (222)
T 1ty9_A 168 QLAEL--QGP-LPRPEGYCVFELRLESLEFWGNGQERLHERLRYDR-------------SDTGWNVRRLQP 222 (222)
T ss_dssp HHHTS--CSC-CCCCTTEEEEEEEEEEEEEEEEEETTEEEEEEEEE-------------ETTEEEEEEECC
T ss_pred HHhhc--cCC-CCCCCCEEEEEEEeeEEEEEECCCCCCcEEEEEEE-------------CCCCEEEEEecC
Confidence 55433 233 78999999999999999999999999999999998 456799998886
No 6
>2i51_A Uncharacterized conserved protein of COG5135; pyridoxamine 5'-phosphate oxidase-related protein, structura genomics; HET: MSE FMN; 1.40A {Nostoc punctiforme}
Probab=100.00 E-value=3e-39 Score=289.31 Aligned_cols=181 Identities=15% Similarity=0.291 Sum_probs=157.1
Q ss_pred ChHHHHHHHHHHhhcCCCCCCCc--eEEEEeecCCCCeeEEEEEEEEeeCC--eEEEEecCCCcchhhhhcCCcEEEEEE
Q psy2497 31 EPFKLFESWFHEANNTPGIIEAN--AMFIATSTKNGIPSGRMVLLKSYGKN--GFVFFTNYNSRKGNELAENPQASLAFY 106 (331)
Q Consensus 31 ~P~~~f~~Wl~~A~~~~~~~e~~--~~~LATvd~dG~P~~R~V~~r~~~~~--gl~F~T~~~S~K~~eL~~np~val~f~ 106 (331)
.|+..|+.||++|++ .+.++|+ +|+|||||+||.|++|+|++++++++ +|+|||+.+|+|++||++||+|+|+|+
T Consensus 2 ~~~~~w~~wl~~a~~-~~~~~p~~~~~~LATv~~dG~P~~R~v~~~~~d~~~~~l~F~T~~~S~K~~~l~~np~v~l~f~ 80 (195)
T 2i51_A 2 MSLAPWRGAIAHALH-RNRSLVYARYLQLATVQPNGRPANRTLVFRGFLEDTNQLRFITDTRSAKADQIQQQPWAEICWY 80 (195)
T ss_dssp CCCCTTHHHHHHHHH-HTTTCGGGGEEEEEEECTTSCEEEEEEECCCBCTTSSCEEEEEETTSHHHHHHHHCCEEEEEEE
T ss_pred CchhHHHHHHHHHHH-hCCCCCCCCEEEEEEECCCCCeeEEEEEEEEEcCCCCeEEEEEcCCccHHHHHhhCCeEEEEEE
Confidence 356689999999996 5666765 89999999999999999999999886 899999999999999999999999999
Q ss_pred eCCCCeEEEEEEEEEecCCcchh--------HHHhcCCccccc-eeecCCCCCCCCCHHHHHHHHHHHHHhhcCCCCCCC
Q psy2497 107 WEPLKRSVRIEGHVEKTSDKESD--------DYFQSRPYASKI-GAIASDQSRPCESRDQMSKITEELRQKYKEGDYVPR 177 (331)
Q Consensus 107 ~~~~~~qvri~G~a~~~~~~~~~--------~~~~~~p~~~~~-~~~~s~q~~~i~d~~~l~~~~~~~~~~~~~~~~~p~ 177 (331)
|+...+||||+|+|+++++++.+ .||.++|..+++ ++|+++ |+++.+.. .++.++|+ ++ +|+
T Consensus 81 ~~~~~~qvri~G~a~~v~~~~~~~~~~~~r~~~w~~~~~~sr~~~~~~sp-g~~~~~~~------~~~~~~~~-~~-~p~ 151 (195)
T 2i51_A 81 FPNTREQFRMAGDLTLISSDDSHQDLQPARIAMWQELSDAARLQFGWPYP-GKPRIKES------GAFEPSPP-DP-IEP 151 (195)
T ss_dssp ETTTTEEEEEEEEEEEECSSSTTGGGHHHHHHHHHHSCHHHHHGGGSCCT-TSBCCCCG------GGGCCCCC-CS-SSC
T ss_pred eCCCCEEEEEEEEEEEEChHHhhhhhHHHHHHHHHhCChhhhhhcccCCC-CCCccchh------HHhhhhcc-CC-CCC
Confidence 99999999999999999998886 999999999998 589877 58876443 12333443 33 789
Q ss_pred CCceEEEEEeceEEEeeecCCCCccceEEEeccCCCCCCCCCCCcCCCCceEeeecC
Q psy2497 178 PKHWGGYVVIPKVIEFWQGQSDRVHDRIVFKRPVPGEPLGPHSHEGEDGWYYERLFP 234 (331)
Q Consensus 178 P~~~~~l~v~p~~iEfwq~~~~r~h~R~~f~k~~~~~~~~~~~~~~~~gw~f~tl~p 234 (331)
|++|+||+|.|++|||||+..++ |+|++|.+ .++++|...+++|
T Consensus 152 p~~w~~~~v~P~~iefwq~~~~r-h~R~~y~~------------~~~~~W~~~rl~P 195 (195)
T 2i51_A 152 VPNFCLLLLDPVQVDHLELRGEP-QNRWLYHR------------NDQQEWSSEAINP 195 (195)
T ss_dssp CTTEEEEEEEEEEEEEEESSSSS-CEEEEEEE------------CTTSCEEEEEBCC
T ss_pred CCceEEEEEEccEEEEEecCCCC-ceEEEEEE------------CCCCCEEEEEeCC
Confidence 99999999999999999999998 99999998 2356799998876
No 7
>2ou5_A Pyridoxamine 5'-phosphate oxidase-related, FMN-BI; split barrel-like fold, structural genomics, joint center FO structural genomics, JCSG; HET: MSE FMN; 1.60A {Jannaschia SP}
Probab=100.00 E-value=8e-33 Score=243.64 Aligned_cols=148 Identities=16% Similarity=0.249 Sum_probs=133.0
Q ss_pred CCCCC-ceEEEEeecCCCCeeEEEEEEEEeeC--CeEEEEecCCCcchhhhhcCCcEEEEEEeCCCCeEEEEEEEEEecC
Q psy2497 48 GIIEA-NAMFIATSTKNGIPSGRMVLLKSYGK--NGFVFFTNYNSRKGNELAENPQASLAFYWEPLKRSVRIEGHVEKTS 124 (331)
Q Consensus 48 ~~~e~-~~~~LATvd~dG~P~~R~V~~r~~~~--~gl~F~T~~~S~K~~eL~~np~val~f~~~~~~~qvri~G~a~~~~ 124 (331)
+..++ ++|+|||+|+|| |++|+|+++++++ ++|+|+|+.+|+|++||++||+|+|+|+|+...+||||+|+|++++
T Consensus 24 ~~~~p~~~~~LATv~~dG-P~~R~v~~~~~~~~~~~l~F~T~~~s~K~~~l~~nP~v~l~f~~~~~~~qvri~G~a~~~~ 102 (175)
T 2ou5_A 24 DRHHPARHPTLATIGTDG-PDLRTLVLRAASHAEATLEFHTDAASPKVAHIRRDARVAIHIWIPKASLQVRAKAIAKILP 102 (175)
T ss_dssp CTTSGGGSCEEEEEETTE-EEEEECCCCEEETTTTEEEEEEETTSHHHHHHHHCCEEEEEEEEGGGTEEEEEEEEEEEEE
T ss_pred cCCCCcceEEEEEeCCCC-CceeEEEEEEEEcCCCEEEEEECCCChHHHHHhhCCcEEEEEEeCCCCEEEEEEEEEEEeC
Confidence 45566 999999999999 9999999999974 5899999999999999999999999999999999999999999998
Q ss_pred CcchhHHHhcCCccccceeecC-CCCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCCceEEEEEeceEEEeeecCCCCccc
Q psy2497 125 DKESDDYFQSRPYASKIGAIAS-DQSRPCESRDQMSKITEELRQKYKEGDYVPRPKHWGGYVVIPKVIEFWQGQSDRVHD 203 (331)
Q Consensus 125 ~~~~~~~~~~~p~~~~~~~~~s-~q~~~i~d~~~l~~~~~~~~~~~~~~~~~p~P~~~~~l~v~p~~iEfwq~~~~r~h~ 203 (331)
++ ++||+++|..+++. |.+ .||.++.+ . . +|.|++|+||+|.|++|||||++.+ |+
T Consensus 103 d~--~~~w~~~~~~~~~~-~~~~~~~~~~~~--~---------------l-~~~p~~~~~~~v~p~~vefw~~~~~--h~ 159 (175)
T 2ou5_A 103 GD--PNLFAQLPEAARMN-YQGPVPGTPLPA--E---------------P-DATPNRFTRLICHLSEIDVLHLTTP--HQ 159 (175)
T ss_dssp CC--HHHHHHSCHHHHGG-GSSSCTTCBSSC--C---------------C-CCCSCCEEEEEEEEEEEEEEECCSS--CE
T ss_pred cH--HHHHHHCCHhHHhc-ccCCCCCCcccc--c---------------c-CCCCCcEEEEEEEeeEEEEEeCCCC--ce
Confidence 87 89999999999987 676 58999876 1 1 5688999999999999999999987 99
Q ss_pred eEEEeccCCCCCCCCCCCcCCCCceEeeecC
Q psy2497 204 RIVFKRPVPGEPLGPHSHEGEDGWYYERLFP 234 (331)
Q Consensus 204 R~~f~k~~~~~~~~~~~~~~~~gw~f~tl~p 234 (331)
|++|.+ ++ |...+++|
T Consensus 160 R~~y~~-------------~~--W~~~~l~P 175 (175)
T 2ou5_A 160 RAVYTA-------------PD--WRGIWVSP 175 (175)
T ss_dssp EEEEET-------------TT--CCCEEECC
T ss_pred EEEEEc-------------CC--ceEEEecC
Confidence 999997 23 98888876
No 8
>1ci0_A Protein (PNP oxidase); B6 metabolism, structural genomics, PSI, protein structure initiative; HET: FMN; 2.70A {Saccharomyces cerevisiae} SCOP: b.45.1.1
Probab=99.96 E-value=4.1e-30 Score=235.18 Aligned_cols=119 Identities=34% Similarity=0.606 Sum_probs=110.4
Q ss_pred CCCCccceEEEeccCCCCCCCCCCCcCCCCceEeeecC-CCccccccchhHhhCCceEEEeecCCCCceEEEEEEeeEcC
Q psy2497 197 QSDRVHDRIVFKRPVPGEPLGPHSHEGEDGWYYERLFP-QPKQGIQYLHLKAENPQASLAFYWEPLKRSVRIEGHVEKTS 275 (331)
Q Consensus 197 ~~~r~h~R~~f~k~~~~~~~~~~~~~~~~gw~f~tl~p-S~K~~~~~~~~l~~np~aal~f~W~~l~RQVri~G~v~~~~ 275 (331)
..|++|.|.++.+ +++++|++|+|++. |+|+ ++|++||+|||+|||+.+.|||||+|.|++++
T Consensus 66 ~dG~P~~R~V~lk-----------~~d~~g~~F~Tn~~~S~K~-----~eL~~NP~val~f~~~~~~rqVrI~G~ae~v~ 129 (228)
T 1ci0_A 66 PSGRVSSRILLFK-----------ELDHRGFTIYSNWGTSRKA-----HDIATNPNAAIVFFWKDLQRQVRVEGITEHVN 129 (228)
T ss_dssp TTTEEEEEEEECC-----------EECSSSEEEEEECSSSHHH-----HHHHHCCEEEEEEEETTTTEEEEEEEEEEECC
T ss_pred CCCCeEEEEEEEE-----------EECCCEEEEEeCCCCCcch-----HHHhhCCeEEEEEEeCCCCEEEEEEEEEEEcC
Confidence 3578999999987 45678999999999 9996 37999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCCCcccceecccCCCCCCCHHHHHHHHHHHHhHhcCCCCCCCCCC
Q psy2497 276 DKESDDYFQSRPYASKIGAIASDQSRPCESRDQMSKITEELRQKYKEGDYVPRPKH 331 (331)
Q Consensus 276 ~~es~~yf~~Rp~~sqi~a~~s~QS~~i~~r~~l~~~~~~~~~~~~~~~~vp~P~~ 331 (331)
++++++||++||++||||||+|+||++|.||+.|+++++++.++|+++++||+|++
T Consensus 130 ~~~~~~yf~~rp~~s~i~awas~qs~~i~~r~~l~~~~~~~~~~f~~~~~~p~p~~ 185 (228)
T 1ci0_A 130 RETSERYFKTRPRGSKIGAWASRQSDVIKNREELDELTQKNTERFKDAEDIPCPDY 185 (228)
T ss_dssp HHHHHHHHHHSCHHHHHHHHHCCTTCEESCHHHHHHHHHHHHHHTTSCSSCCCCTT
T ss_pred chhhHHHHHhCCHHHhhceeeCCCCcccCCHHHHHHHHHHHHHhhcCCCCCCCCCc
Confidence 99999999999999999999999999999999999999999999976544999985
No 9
>2a2j_A Pyridoxamine 5'-phosphate oxidase; beta barrel, structural genomics, mycobacterium tuberculosis structural proteomics project, XMTB; HET: CME; 2.50A {Mycobacterium tuberculosis} SCOP: b.45.1.1
Probab=99.96 E-value=2.1e-29 Score=232.30 Aligned_cols=118 Identities=31% Similarity=0.463 Sum_probs=109.3
Q ss_pred CCCccceEEEeccCCCCCCCCCCCcCCCCceEeeecCCCccccccchhHhhCCceEEEeecCCCCceEEEEEEeeEcCHH
Q psy2497 198 SDRVHDRIVFKRPVPGEPLGPHSHEGEDGWYYERLFPQPKQGIQYLHLKAENPQASLAFYWEPLKRSVRIEGHVEKTSDK 277 (331)
Q Consensus 198 ~~r~h~R~~f~k~~~~~~~~~~~~~~~~gw~f~tl~pS~K~~~~~~~~l~~np~aal~f~W~~l~RQVri~G~v~~~~~~ 277 (331)
.|+|+.|.+..+ +++++|++|+|++.|+|+ ++|++||+|||+|||+.+.|||||+|.|++++++
T Consensus 90 dG~P~~R~Vllk-----------~~d~~gl~F~Tn~~S~K~-----~eL~~NP~vaL~f~~~~~~rqVrI~G~ae~v~~~ 153 (246)
T 2a2j_A 90 DGKPVTRSVLCK-----------ILDESGVAFFTSYTSAKG-----EQLAVTPYASATFPWYQLGRQAHVQGPVSKVSTE 153 (246)
T ss_dssp TTEEEEEEEEEE-----------EEETTEEEEEEETTSHHH-----HHHHHSCEEEEEEEEGGGTEEEEEEEEEEECCHH
T ss_pred CCceEEEEEEEE-----------EEcCCEEEEEEcCCChhh-----HHHhhCCeEEEEEEeCCCCEEEEEEEEEEEeccH
Confidence 467999999987 466789999999999996 3799999999999999999999999999999999
Q ss_pred HHHHHHhcCCCCcccceecccCCCCCCCHHHHHHHHHHHHhHhcCCCCCCCCCC
Q psy2497 278 ESDDYFQSRPYASKIGAIASDQSRPCESRDQMSKITEELRQKYKEGDYVPRPKH 331 (331)
Q Consensus 278 es~~yf~~Rp~~sqi~a~~s~QS~~i~~r~~l~~~~~~~~~~~~~~~~vp~P~~ 331 (331)
++++||++||++|||+||+|+||++|.||+.|+++++++.++|+++++||+|++
T Consensus 154 es~~yf~srp~~sqi~awas~QS~~i~~r~~L~~~~~~~~~~f~~~~~vp~pp~ 207 (246)
T 2a2j_A 154 EIFTYWSMRPRGAQLGAWASQQSRPVGSRAQLDNQLAEVTRRFADQDQIPVPPG 207 (246)
T ss_dssp HHHHHHHHSCHHHHHHHHHSCTTCCCCCSHHHHHHHHHHHHHHTTCSSCCCCTT
T ss_pred hHHHHHHhCCHhhhceEEeCCCCcccCCHHHHHHHHHHHHHhcccCCCCCCCCc
Confidence 999999999999999999999999999999999999999999975435999985
No 10
>1nrg_A Pyridoxine 5'-phosphate oxidase; PLP, FMN, oxidoreductase; HET: FMN PLP; 1.95A {Homo sapiens} SCOP: b.45.1.1 PDB: 3hy8_A*
Probab=99.94 E-value=3.7e-27 Score=219.29 Aligned_cols=117 Identities=41% Similarity=0.687 Sum_probs=109.2
Q ss_pred CCCccceEEEeccCCCCCCCCCCCcCCCCceEeeecCCCccccccchhHhhCCceEEEeecCCCCceEEEEEEeeEcCHH
Q psy2497 198 SDRVHDRIVFKRPVPGEPLGPHSHEGEDGWYYERLFPQPKQGIQYLHLKAENPQASLAFYWEPLKRSVRIEGHVEKTSDK 277 (331)
Q Consensus 198 ~~r~h~R~~f~k~~~~~~~~~~~~~~~~gw~f~tl~pS~K~~~~~~~~l~~np~aal~f~W~~l~RQVri~G~v~~~~~~ 277 (331)
.|+|+.|.+..+ ..+++|++|+|++.|+|+ ++|++||+|||+|+|+.+.|||||+|.|++++++
T Consensus 89 dG~P~~R~V~lk-----------~~d~~gl~F~Tn~~S~K~-----~eL~~NP~vaL~f~~~~~~rqVrI~G~ae~v~d~ 152 (261)
T 1nrg_A 89 DGKPSARMLLLK-----------GFGKDGFRFFTNFESRKG-----KELDSNPFASLVFYWEPLNRQVRVEGPVKKLPEE 152 (261)
T ss_dssp TSCEEEEEEECC-----------CEETTEEEEEEETTSHHH-----HHHHHSCEEEEEEEEGGGTEEEEEEEEEEECCHH
T ss_pred CCCeeEEEEEEE-----------EEcCCEEEEEECCCChhH-----HHHhhCCeEEEEEEeCCCCEEEEEEEEEEEecCc
Confidence 578999999987 456789999999999996 3799999999999999999999999999999999
Q ss_pred HHHHHHhcCCCCcccceecccCCCCCCCHHHHHHHHHHHHhHhcCCCCCCCCCC
Q psy2497 278 ESDDYFQSRPYASKIGAIASDQSRPCESRDQMSKITEELRQKYKEGDYVPRPKH 331 (331)
Q Consensus 278 es~~yf~~Rp~~sqi~a~~s~QS~~i~~r~~l~~~~~~~~~~~~~~~~vp~P~~ 331 (331)
++++||++||++|||+||+|+||++|.+|++|++++++++++|+++ +||+|++
T Consensus 153 e~~~~w~srp~~s~i~awas~Qs~~i~~r~~l~~~~~~~~~~f~~~-~vp~p~~ 205 (261)
T 1nrg_A 153 EAECYFHSRPKSSQIGAVVSHQSSVIPDREYLRKKNEELEQLYQDQ-EVPKPKS 205 (261)
T ss_dssp HHHHHHHHSCHHHHHHHHHCCTTSCCSCHHHHHHHHHHHHHHTTTS-CCCCCTT
T ss_pred chHHHHhcCChhhhhhhhcCCCCCccCCHHHHHHHHHHHHhhcccC-CCCCCCc
Confidence 9999999999999999999999999999999999999999999865 5899875
No 11
>1dnl_A Pyridoxine 5'-phosphate oxidase; beta barrel, protein-FMN complex, oxidoreductase; HET: MSE FMN; 1.80A {Escherichia coli K12} SCOP: b.45.1.1 PDB: 1g79_A* 1g76_A* 1g78_A* 1g77_A* 1jnw_A* 1wv4_A*
Probab=99.93 E-value=1.4e-26 Score=207.63 Aligned_cols=118 Identities=36% Similarity=0.529 Sum_probs=108.9
Q ss_pred CCCCccceEEEeccCCCCCCCCCCCcCCCCceEeeecCCCccccccchhHhhCCceEEEeecCCCCceEEEEEEeeEcCH
Q psy2497 197 QSDRVHDRIVFKRPVPGEPLGPHSHEGEDGWYYERLFPQPKQGIQYLHLKAENPQASLAFYWEPLKRSVRIEGHVEKTSD 276 (331)
Q Consensus 197 ~~~r~h~R~~f~k~~~~~~~~~~~~~~~~gw~f~tl~pS~K~~~~~~~~l~~np~aal~f~W~~l~RQVri~G~v~~~~~ 276 (331)
..|+|+.|.+..+ ..+++|++|+|++.|+|+ ++|++||+|||+|+|+.+.|||||+|+|+.+++
T Consensus 41 ~dG~P~~R~v~~~-----------~~d~~gl~F~T~~~S~K~-----~~L~~np~v~l~f~~~~~~~qvri~G~a~~v~d 104 (199)
T 1dnl_A 41 EHGQPYQRIVLLK-----------HYDEKGMVFYTNLGSRKA-----HQIENNPRVSLLFPWHTLERQVMVIGKAERLST 104 (199)
T ss_dssp TTSCEEEEEEECC-----------EEETTEEEEEEETTSHHH-----HHHHHCCEEEEEECCGGGTEEEEEEEEEEECCH
T ss_pred CCCCEEEEEEEEE-----------EEcCCEEEEEECCCCHHH-----HHHhhCCeEEEEEEcCCCCEEEEEEEEEEEeCC
Confidence 3578999999886 356678999999999996 379999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCCcccceecccCCCCCCCHHHHHHHHHHHHhHhcCCCCCCCCCC
Q psy2497 277 KESDDYFQSRPYASKIGAIASDQSRPCESRDQMSKITEELRQKYKEGDYVPRPKH 331 (331)
Q Consensus 277 ~es~~yf~~Rp~~sqi~a~~s~QS~~i~~r~~l~~~~~~~~~~~~~~~~vp~P~~ 331 (331)
+++++||++||++|||+||+|+||++|+||++|+++++++.++|+++ ++|+|++
T Consensus 105 ~~~~~~w~~~p~~s~~~aw~s~qs~~i~~r~~l~~~~~~~~~~~~~~-~~p~p~~ 158 (199)
T 1dnl_A 105 LEVMKYFHSRPRDSQIGAWVSKQSSRISARGILESKFLELKQKFQQG-EVPLPSF 158 (199)
T ss_dssp HHHHHHHTTSCHHHHHHHHHCCTTSCCSCTHHHHHHHHHHHHHSTTS-SCCCCTT
T ss_pred ccHHHHHHhCChhhhcccccCCCCcccCCHHHHHHHHHHHHhhccCC-CCCCCCc
Confidence 99999999999999999999999999999999999999999999754 5899875
No 12
>1ty9_A Phenazine biosynthesis protein PHZG; chorismate, oxidoreductase; HET: FMN; 1.80A {Pseudomonas fluorescens} SCOP: b.45.1.1 PDB: 1t9m_A*
Probab=99.92 E-value=1.5e-25 Score=204.26 Aligned_cols=115 Identities=23% Similarity=0.366 Sum_probs=104.7
Q ss_pred CCCccceEEEeccCCCCCCCCCCCcCCCCceEeeecCCCccccccchhHhhCCceEEEeecCCCCceEEEEEEeeEcCHH
Q psy2497 198 SDRVHDRIVFKRPVPGEPLGPHSHEGEDGWYYERLFPQPKQGIQYLHLKAENPQASLAFYWEPLKRSVRIEGHVEKTSDK 277 (331)
Q Consensus 198 ~~r~h~R~~f~k~~~~~~~~~~~~~~~~gw~f~tl~pS~K~~~~~~~~l~~np~aal~f~W~~l~RQVri~G~v~~~~~~ 277 (331)
.|+++.|.+..+ ..+++|++|+|++.|+|+ ++|++||+|||+|||+.+.|||||+|+|+.++++
T Consensus 67 dG~P~~R~v~l~-----------~~d~~gl~F~T~~~S~K~-----~eL~~nP~val~f~~~~~~rqvrI~G~ae~v~~~ 130 (222)
T 1ty9_A 67 QGRPSTRIVVIS-----------EISDAGVVFSTHAGSQKG-----RELLHNPWASGVLYWRETSQQIILNGQAVRLPNA 130 (222)
T ss_dssp TCCEEEEEEECC-----------EECSSEEEEEEETTSHHH-----HHHHHCCEEEEEEEETTTTEEEEEEEEEEECCHH
T ss_pred CCCEEEEEEEEE-----------EEcCCEEEEEECCCCcch-----HHHhhCCeEEEEEEcCCCCeEEEEEEEEEEEccH
Confidence 578999999887 356789999999999996 3799999999999999999999999999999999
Q ss_pred HHHHHHhcCCCCcccceecccCCCCCCCHHHHHHHHHHHHhHhcCCCCCCCCCC
Q psy2497 278 ESDDYFQSRPYASKIGAIASDQSRPCESRDQMSKITEELRQKYKEGDYVPRPKH 331 (331)
Q Consensus 278 es~~yf~~Rp~~sqi~a~~s~QS~~i~~r~~l~~~~~~~~~~~~~~~~vp~P~~ 331 (331)
++++||++||++|||+||+|+||.+|++|+.|+++++++.++ + .++|+|++
T Consensus 131 ~~~~~w~~rp~~s~i~A~as~qs~~~~~~~~l~~~~~~~~~~--~-~~~p~p~~ 181 (222)
T 1ty9_A 131 KADDAWLKRPYATHPMSSVSRQSEELQDVQAMRNAARQLAEL--Q-GPLPRPEG 181 (222)
T ss_dssp HHHHHHHTSCGGGHHHHHHCCTTSBCCCHHHHHHHHHHHHTS--C-SCCCCCTT
T ss_pred HhHHHHHhCccccccceeeccCCCcCCChHHHHHHHHHHhhc--c-CCCCCCCC
Confidence 999999999999999999999999999999999998887765 2 25888875
No 13
>3dmb_A Putative general stress protein 26 with A PNP-OXI fold; PNP-oxidase like fold, structural genomics; HET: MSE; 2.30A {Xanthomonas campestris PV}
Probab=99.88 E-value=1.6e-22 Score=172.48 Aligned_cols=123 Identities=13% Similarity=0.148 Sum_probs=97.7
Q ss_pred CCceEEEEeecCCCCeeEEEEEEEE-eeCCe-EEEEecCCCcchhhhhcCCcEEEEEEeCCCCeEEEEEEEEEecCCcch
Q psy2497 51 EANAMFIATSTKNGIPSGRMVLLKS-YGKNG-FVFFTNYNSRKGNELAENPQASLAFYWEPLKRSVRIEGHVEKTSDKES 128 (331)
Q Consensus 51 e~~~~~LATvd~dG~P~~R~V~~r~-~~~~g-l~F~T~~~S~K~~eL~~np~val~f~~~~~~~qvri~G~a~~~~~~~~ 128 (331)
+.++++|||+++|| |++|+|.+.. .+++| |||+|+..|+|+++|++||+|+|+|+|+...+||+|+|+|+++++
T Consensus 18 ~~~~~~LaT~~~d~-~~~~pm~~~~~~d~~g~l~F~T~~~s~K~~~l~~np~v~l~~~~~~~~~~v~v~G~a~~~~d--- 93 (147)
T 3dmb_A 18 SDRTVMLGLDGVED-GHARPMTAQIEGDSGGPIWFFTSKDNALIAMLGQGRRVIGAFSSKGHDLFASISGSLREDTD--- 93 (147)
T ss_dssp HHCEEEEEETTSSS-CCCEEEEEECSSSSCCCEEEEECTTCTTHHHHTTCEEEEEEEECTTSSEEEEEEEEEEECCC---
T ss_pred cCCEEEEEEEcCCC-CceEeCccccccCCCceEEEEecCCcHHHHHHhhCCeEEEEEEcCCCCeEEEEEEEEEEecC---
Confidence 56679999999876 8999999963 33345 999999999999999999999999999998899999999998764
Q ss_pred hHHHhcCCccccceeecCCCCCCCCCHHHHHHHHHH-HHHhhcCCCCCCCCCceEEEEEeceEEEeeecCCCCccceEEE
Q psy2497 129 DDYFQSRPYASKIGAIASDQSRPCESRDQMSKITEE-LRQKYKEGDYVPRPKHWGGYVVIPKVIEFWQGQSDRVHDRIVF 207 (331)
Q Consensus 129 ~~~~~~~p~~~~~~~~~s~q~~~i~d~~~l~~~~~~-~~~~~~~~~~~p~P~~~~~l~v~p~~iEfwq~~~~r~h~R~~f 207 (331)
++.+++.|.. +..+|+++ +++++|++|+|.|.++|||++..+ ...++.+
T Consensus 94 --------------------------~~~~~~~~~~~~~~~~~~g---~~dp~~~vl~v~p~~~e~W~~~~~-~~~~~~~ 143 (147)
T 3dmb_A 94 --------------------------PAVVDRLWNPYVAAWYEGG---KDDPKLALLRLDADHAQIWLNGSS-LLAGIKV 143 (147)
T ss_dssp --------------------------HHHHHHHCCHHHHHHCTTG---GGCTTCEEEEEEEEEEEEEECCCC-CCCCCCC
T ss_pred --------------------------HHHHHHHhhHHHHHHccCC---CCCCCEEEEEEEcCEEEEEECCCC-ceeEEEE
Confidence 3334444333 34566654 356889999999999999999865 3344433
No 14
>2qea_A Putative general stress protein 26; structural genomics, JOI for structural genomics, JCSG, protein structure initiative oxidoreductase; 2.46A {Jannaschia SP}
Probab=99.86 E-value=6.5e-22 Score=170.81 Aligned_cols=125 Identities=11% Similarity=0.088 Sum_probs=101.3
Q ss_pred CCCceEEEEeecCCCCeeEEEEEEEEeeCCe--EEEEecCCCcchhhhhcCCc-EEEEEEeCCCCeEEEEEEEEEecCCc
Q psy2497 50 IEANAMFIATSTKNGIPSGRMVLLKSYGKNG--FVFFTNYNSRKGNELAENPQ-ASLAFYWEPLKRSVRIEGHVEKTSDK 126 (331)
Q Consensus 50 ~e~~~~~LATvd~dG~P~~R~V~~r~~~~~g--l~F~T~~~S~K~~eL~~np~-val~f~~~~~~~qvri~G~a~~~~~~ 126 (331)
.+.++++||| ||.|++|||.+..++++| |||+|+..|+|+++|++||+ |+|+|+|+...+||+|+|+|+++++
T Consensus 14 ~~~~~~~LaT---dG~P~~rpv~~~~~~~~g~~l~f~t~~~s~K~~~l~~np~~v~l~~~~~~~~~~v~v~G~a~~v~d- 89 (160)
T 2qea_A 14 EDVRSGMLGI---KGQGRLIPMSPQTDDDAPGAIWFITAKGTDLAKGVAAGPQPAQFVVSDDGEGLYADLDGTLERSTD- 89 (160)
T ss_dssp TTCCCEEEEE---TTSSCCEEECCBCCTTSCSCEEEEEETTSHHHHHTSSSCEEEEEEEEETTTTEEEEEEEEEEEECC-
T ss_pred hcCCEEEEEe---CCCeeEEEeeeeEecCCCCEEEEEECCCCHHHHHHHhCCceEEEEEECCCCCeEEEEEEEEEEEcC-
Confidence 3678899999 799999999998666555 99999999999999999999 9999999999999999999998654
Q ss_pred chhHHHhcCCccccceeecCCCCCCCCCHHHHHHHHHHHHH-hhcCCCCCCCCCceEEEEEeceEEEeeecCCCCccceE
Q psy2497 127 ESDDYFQSRPYASKIGAIASDQSRPCESRDQMSKITEELRQ-KYKEGDYVPRPKHWGGYVVIPKVIEFWQGQSDRVHDRI 205 (331)
Q Consensus 127 ~~~~~~~~~p~~~~~~~~~s~q~~~i~d~~~l~~~~~~~~~-~~~~~~~~p~P~~~~~l~v~p~~iEfwq~~~~r~h~R~ 205 (331)
++.+++.|..+.. +|+++ +.+++|++|+|.|+++|||++..+++...+
T Consensus 90 ----------------------------~~~~~~~~~~~~~~~~~~~---~~~p~~~v~~i~p~~~e~w~~~~~~l~~~~ 138 (160)
T 2qea_A 90 ----------------------------REALDEFWSFVADAWFDGG---QHDPDVCLLKFTPASGEISITEGGGARFLY 138 (160)
T ss_dssp ----------------------------HHHHHHSCCHHHHHHCTTC---SSCTTEEEEEEEEEEEEEEEECCSSHHHHH
T ss_pred ----------------------------HHHHHHHHHHHHHHHccCC---CCCCCEEEEEEECCEEEEEECCCChHHHHH
Confidence 4444444444433 44544 367889999999999999999877765545
Q ss_pred EEec
Q psy2497 206 VFKR 209 (331)
Q Consensus 206 ~f~k 209 (331)
.+.+
T Consensus 139 ~~~~ 142 (160)
T 2qea_A 139 EIAK 142 (160)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 4443
No 15
>2re7_A Uncharacterized protein; general stress protein COG3871, structural genomics, joint C structural genomics, JCSG; 2.50A {Psychrobacter arcticus}
Probab=99.86 E-value=2.2e-21 Score=161.29 Aligned_cols=114 Identities=17% Similarity=0.271 Sum_probs=93.9
Q ss_pred CCceEEEEeecCCCCeeEEEEEEEEee--CCeEEEEecCCCcchhhhhcCCcEEEEEEeCCCCeEEEEEEEEEecCCcch
Q psy2497 51 EANAMFIATSTKNGIPSGRMVLLKSYG--KNGFVFFTNYNSRKGNELAENPQASLAFYWEPLKRSVRIEGHVEKTSDKES 128 (331)
Q Consensus 51 e~~~~~LATvd~dG~P~~R~V~~r~~~--~~gl~F~T~~~S~K~~eL~~np~val~f~~~~~~~qvri~G~a~~~~~~~~ 128 (331)
+.++++|||+++||.|++|||.+...+ ++.|||+|+..|+|+++|++||+|+|+|+++...+||+|+|+|+++++
T Consensus 17 ~~~~~~LaT~~~dG~P~~~pv~~~~~~~~~~~l~f~t~~~s~K~~~l~~np~v~l~~~~~~~~~~v~v~G~a~~~~d--- 93 (134)
T 2re7_A 17 DVKFAMISTSNKKGDIHAWPMTTSEVNLDNKEIWFIGDKTSDVVKDIQDDARIGLTYATQDEKNYVSISGDAELPTD--- 93 (134)
T ss_dssp HCSCEEEEEECTTSCEEEEEECCSEEETTTTEEEEEEETTSHHHHHHHHCCEEEEEEECTTSSCEEEEEEEEECCCC---
T ss_pred cCCEEEEEEEcCCCCEEEEecEeeeecCCCceEEEEECCCCHHHHHHhhCCcEEEEEEcCCCCeEEEEEEEEEEECC---
Confidence 456799999999999999999998776 446999999999999999999999999999988899999999998654
Q ss_pred hHHHhcCCccccceeecCCCCCCCCCHHHHHHHHHHH-HHhhcCCCCCCCCCceEEEEEeceEEEeeec
Q psy2497 129 DDYFQSRPYASKIGAIASDQSRPCESRDQMSKITEEL-RQKYKEGDYVPRPKHWGGYVVIPKVIEFWQG 196 (331)
Q Consensus 129 ~~~~~~~p~~~~~~~~~s~q~~~i~d~~~l~~~~~~~-~~~~~~~~~~p~P~~~~~l~v~p~~iEfwq~ 196 (331)
.+.+++.|..+ ..+|+++ +.++++++|+|.|++++||++
T Consensus 94 --------------------------~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~i~~~~~~~w~~ 133 (134)
T 2re7_A 94 --------------------------KAKLDELWSPVYSAFFANG---KEDANIQLIKVVPHGVECWLS 133 (134)
T ss_dssp --------------------------HHHHHHHCCHHHHHTSTTG---GGCTTEEEEEEEEEEEEEECC
T ss_pred --------------------------HHHHHHHhhHHHHHHccCC---CCCCCEEEEEEEeCEEEEecC
Confidence 33333343332 3345443 245789999999999999986
No 16
>2ig6_A NIMC/NIMA family protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: FMN; 1.80A {Clostridium acetobutylicum}
Probab=99.84 E-value=1.5e-20 Score=160.94 Aligned_cols=115 Identities=12% Similarity=0.133 Sum_probs=98.2
Q ss_pred CCceEEEEeecCCCCeeEEEEEEEEeeCCeEEEEecCCCcchhhhhcCCcEEEEEEeCCCCeEEEEEEEEEecCCcc-hh
Q psy2497 51 EANAMFIATSTKNGIPSGRMVLLKSYGKNGFVFFTNYNSRKGNELAENPQASLAFYWEPLKRSVRIEGHVEKTSDKE-SD 129 (331)
Q Consensus 51 e~~~~~LATvd~dG~P~~R~V~~r~~~~~gl~F~T~~~S~K~~eL~~np~val~f~~~~~~~qvri~G~a~~~~~~~-~~ 129 (331)
++.+++|||++ +|.|++|||.+...++++|||+|+.+|+|+++|++||+|+|+|+++. .++|+|+|+|+++++.+ .+
T Consensus 29 ~~~~~~LaTv~-dG~P~~rpv~~~~~~~~~l~f~t~~~s~K~~~l~~np~V~l~~~~~~-~~~v~i~G~a~~v~d~e~~~ 106 (150)
T 2ig6_A 29 ECGVFYLATNE-GDQPRVRPFGAVFEYEGKLYIVSNNTKKCFKQMIQNPKVEISGMNKK-GQWIRLTGEVANDDRREVKE 106 (150)
T ss_dssp HHCSEEEEEEE-TTEEEEEEECCCEEETTEEEEEEETTSHHHHHHHHCCEEEEEEECTT-SCEEEEEEEEEECCCHHHHH
T ss_pred hCCeEEEEEcc-CCceEEEEeEEEEEcCCEEEEEeCCCcHHHHHHHHCCCEEEEEEcCC-CeEEEEEEEEEEECCHHHHH
Confidence 45679999999 99999999999766777899999999999999999999999999988 79999999999999865 57
Q ss_pred HHHhcCCccccceeecCCCCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCCceEEEEEeceEEEeeecCCC
Q psy2497 130 DYFQSRPYASKIGAIASDQSRPCESRDQMSKITEELRQKYKEGDYVPRPKHWGGYVVIPKVIEFWQGQSD 199 (331)
Q Consensus 130 ~~~~~~p~~~~~~~~~s~q~~~i~d~~~l~~~~~~~~~~~~~~~~~p~P~~~~~l~v~p~~iEfwq~~~~ 199 (331)
++|..+|...+ +| ++ ..+++++|+|.|.+++||+..++
T Consensus 107 ~~~~~~p~~~~---------------------------~~--~~---~dp~~~l~~v~~~~a~~wd~~~~ 144 (150)
T 2ig6_A 107 LALEAVPSLKN---------------------------MY--SV---DDGIFAVLYFTKGEGTICSFKGE 144 (150)
T ss_dssp HHHHHSGGGGG---------------------------TC--CT---TSSCEEEEEEEEEEEEEECSSSC
T ss_pred HHHHhChHHHH---------------------------hh--cC---CCCcEEEEEEECCEEEEEeCCCC
Confidence 88877665443 34 21 23679999999999999988655
No 17
>2hhz_A Pyridoxamine 5'-phosphate oxidase-related; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.00A {Streptococcus suis}
Probab=99.83 E-value=6.3e-20 Score=155.92 Aligned_cols=118 Identities=16% Similarity=0.229 Sum_probs=97.5
Q ss_pred CCceEEEEeecCCCCeeEEEEEEEEeeCCeEEEEecCCCcchhhhhcCCcEEEEEEeCCC--CeEEEEEEEEEecCCcch
Q psy2497 51 EANAMFIATSTKNGIPSGRMVLLKSYGKNGFVFFTNYNSRKGNELAENPQASLAFYWEPL--KRSVRIEGHVEKTSDKES 128 (331)
Q Consensus 51 e~~~~~LATvd~dG~P~~R~V~~r~~~~~gl~F~T~~~S~K~~eL~~np~val~f~~~~~--~~qvri~G~a~~~~~~~~ 128 (331)
+.++++|||+++||.|++|+|.+...++++|||+|+..|+|+++|++||+|+++|+++.. .++|+|+|+|+++++.+.
T Consensus 13 ~~~~~~LaTv~~dG~P~~~p~~~~~~~~~~l~f~t~~~s~k~~~l~~np~V~l~~~~~~~~~~~~v~i~G~a~~v~d~~~ 92 (150)
T 2hhz_A 13 DMKVGVFATLDEYGNPHARHAHITAANEEGIFFMTSPETHFYDQLMGDQRVAMTAISEEGYLIQVVRVEGTARPVENDYL 92 (150)
T ss_dssp HTCEEEEEEECTTCCEEEEEEEEEEEETTEEEEEECTTSHHHHHHHHCCEEEEEEEECSTTCCEEEEEEEEEEEECHHHH
T ss_pred cCCeEEEEEECCCCCEEEEEEEEEEEcCCEEEEEecCCCHHHHHHhhCCeEEEEEEcCCcceeEEEEEEEEEEECCcHHH
Confidence 456799999999999999999998777778999999999999999999999999999875 389999999999998877
Q ss_pred hHHHhcCCccccceeecCCCCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCCceEEEEEeceEEEeeecCCC
Q psy2497 129 DDYFQSRPYASKIGAIASDQSRPCESRDQMSKITEELRQKYKEGDYVPRPKHWGGYVVIPKVIEFWQGQSD 199 (331)
Q Consensus 129 ~~~~~~~p~~~~~~~~~s~q~~~i~d~~~l~~~~~~~~~~~~~~~~~p~P~~~~~l~v~p~~iEfwq~~~~ 199 (331)
.++|..+|... ++|++ +..+++++|+|.|.+++||+...+
T Consensus 93 ~~~~~~~p~~~---------------------------~~~~~----~~~~~~~v~~i~~~~~~~~d~~~~ 132 (150)
T 2hhz_A 93 KTVFADNPYYQ---------------------------HIYKD----ESSDTMQVFQIYAGHGFYHSLTQG 132 (150)
T ss_dssp HHHHTTCGGGG---------------------------GGCC---------CCEEEEEEEEEEEEEEGGGT
T ss_pred HHHHHhChhhh---------------------------hcccC----CCCCcEEEEEEEccEEEEEECCCC
Confidence 78886544322 23322 133579999999999999998765
No 18
>3u35_A General stress protein; PNP-oxidase like fold, FMN/FAD, protein BI; HET: PGE; 2.50A {Xanthomonas axonopodis PV} PDB: 3u34_A*
Probab=99.83 E-value=3.7e-21 Score=170.21 Aligned_cols=124 Identities=14% Similarity=0.161 Sum_probs=100.7
Q ss_pred CCceEEEEeecCCCCeeEEEEEEEE-eeCCe-EEEEecCCCcchhhhhcCCcEEEEEEeCCCCeEEEEEEEEEecCCcc-
Q psy2497 51 EANAMFIATSTKNGIPSGRMVLLKS-YGKNG-FVFFTNYNSRKGNELAENPQASLAFYWEPLKRSVRIEGHVEKTSDKE- 127 (331)
Q Consensus 51 e~~~~~LATvd~dG~P~~R~V~~r~-~~~~g-l~F~T~~~S~K~~eL~~np~val~f~~~~~~~qvri~G~a~~~~~~~- 127 (331)
+.++++|||+++|| |++|+|++.. .+.+| |||+|+..|+|+++|++||+|+|||+++...+||+|+|+|+++++.+
T Consensus 37 ~~~~~~LaTv~~dg-p~~rpm~~~~d~d~~g~l~F~T~~~s~K~~~l~~np~v~l~~~~~~~~~~V~v~G~a~vv~D~e~ 115 (182)
T 3u35_A 37 SDRTVMLGLDGVED-GHARPMTAQIEGDSGGPIWFFTSKDNALIAMLGQGRRVIGAFSSKGHDLFASISGSLREDTDPAM 115 (182)
T ss_dssp HHCEEEECCTTSGG-GCCEEEECBCSSSSCSCEEEEEETTCGGGGGCTTCEEEEEEEECTTSSEEEEEEEEEEECCCHHH
T ss_pred cCCEEEEEEecCCC-CcEEEEEEEEeecCCCEEEEEECCCCHHHHHHHHCCcEEEEEECCCCCeEEEEEEEEEEEcCHHH
Confidence 56679999999886 8999999863 23345 99999999999999999999999999998899999999999976543
Q ss_pred hhHHHhcCCccccceeecCCCCCCCCCHHHHHHHHHH-HHHhhcCCCCCCCCCceEEEEEeceEEEeeecCCCCccceEE
Q psy2497 128 SDDYFQSRPYASKIGAIASDQSRPCESRDQMSKITEE-LRQKYKEGDYVPRPKHWGGYVVIPKVIEFWQGQSDRVHDRIV 206 (331)
Q Consensus 128 ~~~~~~~~p~~~~~~~~~s~q~~~i~d~~~l~~~~~~-~~~~~~~~~~~p~P~~~~~l~v~p~~iEfwq~~~~r~h~R~~ 206 (331)
.+++| .. +..+|++++ .+|++++|+|.|.+++||++..+ +-.|+.
T Consensus 116 ~~~lw------------------------------~~~~~~~~p~g~---~dP~~~vlrv~p~~~e~Wd~~~~-~~~~~~ 161 (182)
T 3u35_A 116 VDRLW------------------------------NPYVAAWYEGGK---TDPNLALLRLDADHAQIWLNESS-LLAGIK 161 (182)
T ss_dssp HHHHC------------------------------CHHHHTTCTTGG---GCTTEEEEEEEEEEEEEEEEEEE-ECCCEE
T ss_pred HHHHH------------------------------HHHHHHhccCCC---CCCCEEEEEEEeCEEEEEeCCCC-ceeeee
Confidence 23444 22 345676553 56789999999999999999876 567777
Q ss_pred Eec
Q psy2497 207 FKR 209 (331)
Q Consensus 207 f~k 209 (331)
+..
T Consensus 162 ~~~ 164 (182)
T 3u35_A 162 VLL 164 (182)
T ss_dssp EEC
T ss_pred eec
Confidence 764
No 19
>2i02_A General stress protein of COG3871; pyridoxamine 5'-phosphate like family protein, structural genomics, joint center for structural genomics; HET: MSE FMN P33; 1.80A {Nostoc punctiforme} SCOP: b.45.1.1
Probab=99.82 E-value=6.5e-20 Score=155.04 Aligned_cols=118 Identities=17% Similarity=0.244 Sum_probs=93.5
Q ss_pred CCCceEEEEeecCCCCeeEEEEEE-EEee-CCeEEEEecCCCcchhhhhcCCcEEEEEEeCCCCeEEEEEEEEEecCCcc
Q psy2497 50 IEANAMFIATSTKNGIPSGRMVLL-KSYG-KNGFVFFTNYNSRKGNELAENPQASLAFYWEPLKRSVRIEGHVEKTSDKE 127 (331)
Q Consensus 50 ~e~~~~~LATvd~dG~P~~R~V~~-r~~~-~~gl~F~T~~~S~K~~eL~~np~val~f~~~~~~~qvri~G~a~~~~~~~ 127 (331)
.+.++++|||+++||.|++|||.+ ..++ ++.|||+|+..|+|+++|++||+|+|+|+++...++|+|.|+|+++++.+
T Consensus 20 ~~~~~~~LaT~~~dG~P~~~pv~~~~~~~~~~~l~f~t~~~s~k~~~l~~np~v~l~~~~~~~~~~v~v~G~a~~v~d~~ 99 (148)
T 2i02_A 20 KNIDYGMFTTVDDDGSLHSYPMSKSGDINSEATLWFFTYAGSHKVTEIEHHEQVNVSFSSPEQQRYVSISGTSQLVKDRN 99 (148)
T ss_dssp TTCCEEEEEEECTTSCEEEEEEECBCC---CCEEEEEEETTSHHHHHHHHCCEEEEEEEETTTTEEEEEEEEEEEECCHH
T ss_pred hcCCEEEEEEEcCCCCEEEEEeEeeEEEcCCCeEEEEEcCCCHHHHHHHhCCcEEEEEEcCCCCeEEEEEEEEEEEcCHH
Confidence 367899999999999999999999 6665 44599999999999999999999999999998889999999999987654
Q ss_pred h-hHHHhcCCccccceeecCCCCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCCceEEEEEeceEEEeeecCCC
Q psy2497 128 S-DDYFQSRPYASKIGAIASDQSRPCESRDQMSKITEELRQKYKEGDYVPRPKHWGGYVVIPKVIEFWQGQSD 199 (331)
Q Consensus 128 ~-~~~~~~~p~~~~~~~~~s~q~~~i~d~~~l~~~~~~~~~~~~~~~~~p~P~~~~~l~v~p~~iEfwq~~~~ 199 (331)
. .++|... +..+++++. ..++|++|+|.|++++||++..+
T Consensus 100 ~~~~~~~~~-----------------------------~~~~~~~~~---~~~~~~v~~i~~~~~~~~~~~~~ 140 (148)
T 2i02_A 100 KMRELWKPE-----------------------------LQTWFPKGL---DEPDIALLKVNINQVNYWDSTSS 140 (148)
T ss_dssp HHHHHCCGG-----------------------------GGGTCTTGG---GCTTEEEEEEEEEEEEEEEGGGT
T ss_pred HHHHHHhHH-----------------------------HHHHccCCC---CCCCEEEEEEEeCEEEEEcCCCC
Confidence 3 4454211 111233221 23569999999999999998654
No 20
>2iab_A Hypothetical protein; NP_828636.1, structural genomics, JOIN for structural genomics, JCSG; 2.00A {Streptomyces avermitilis}
Probab=99.82 E-value=1.2e-19 Score=155.86 Aligned_cols=125 Identities=14% Similarity=0.178 Sum_probs=99.0
Q ss_pred CCCceEEEEeecCC-CCeeEEEEEEEEeeCCeEEEEecCCCcchhhhhcCCcEEEEEEeCCCCeEEEEEEEEEecCCcch
Q psy2497 50 IEANAMFIATSTKN-GIPSGRMVLLKSYGKNGFVFFTNYNSRKGNELAENPQASLAFYWEPLKRSVRIEGHVEKTSDKES 128 (331)
Q Consensus 50 ~e~~~~~LATvd~d-G~P~~R~V~~r~~~~~gl~F~T~~~S~K~~eL~~np~val~f~~~~~~~qvri~G~a~~~~~~~~ 128 (331)
.+.++++|||+++| |.|++++|.+. +++++|||+|+..|+|+++|++||+|+|++.+. .++|+|+|+|+++++++.
T Consensus 22 ~~~~~~~LaT~~~d~G~P~~~pv~~~-~d~~~l~f~t~~~s~K~~~l~~np~Vsl~v~~~--~~~v~v~G~a~~v~d~~~ 98 (155)
T 2iab_A 22 ELDVDAWVSTAGADGGAPYLVPLSYL-WDGETFLVATPAASPTGRNLSETGRVRLGIGPT--RDLVLVEGTALPLEPAGL 98 (155)
T ss_dssp HHCCEEEEEEECTTSSCEEEEEEECE-ECSSCEEEEEETTSHHHHHHHHHCEEEEEESST--TCEEEEEEEEEEECGGGC
T ss_pred hCCCeEEEEEecCCCCCceEEEEEEE-EECCEEEEEECCCCHHHHHHhhCCcEEEEEEcC--CCEEEEEEEEEEecCchh
Confidence 36788999999999 99999999997 676789999999999999999999999999987 489999999999875431
Q ss_pred hHHHhcCCccccceeecCCCCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCCceEEEEEeceEEEeeecCCCCccceEEEe
Q psy2497 129 DDYFQSRPYASKIGAIASDQSRPCESRDQMSKITEELRQKYKEGDYVPRPKHWGGYVVIPKVIEFWQGQSDRVHDRIVFK 208 (331)
Q Consensus 129 ~~~~~~~p~~~~~~~~~s~q~~~i~d~~~l~~~~~~~~~~~~~~~~~p~P~~~~~l~v~p~~iEfwq~~~~r~h~R~~f~ 208 (331)
+.+.++.+.++|...+..+. +.|++|+|.|+++++|+. .+++|.|.+|.
T Consensus 99 -----------------------------~~~~~~~~~~k~~~~~~~~~-~~~~~~ri~p~~v~~w~~-~~~l~~r~~~~ 147 (155)
T 2iab_A 99 -----------------------------PDGVGDTFAEKTGFDPRRLT-TSYLYFRISPRRVQAWRE-ANELSGRELMR 147 (155)
T ss_dssp -----------------------------CTTHHHHHHHHHSCCGGGCS-SCEEEEEEEEEEEEEESS-GGGSTTCEEEE
T ss_pred -----------------------------HHHHHHHHHHHhCCCccccC-CCEEEEEEEEEEEEEecC-CCCcCcceEEE
Confidence 11122333344421110122 459999999999999986 67899999996
No 21
>2hq7_A Protein, related to general stress protein 26(GS2 B.subtilis; NP_350077.1, structural genomics, joint center for structural genomics; 2.00A {Clostridium acetobutylicum} SCOP: b.45.1.1
Probab=99.78 E-value=9.4e-19 Score=147.01 Aligned_cols=115 Identities=15% Similarity=0.211 Sum_probs=92.7
Q ss_pred CCceEEEEeecCCCCeeEEEEEEEEeeC-CeEEEEecCCCcchhhhhcCCcEEEEEEeCCCCeEEEEEEEEEecCCcc-h
Q psy2497 51 EANAMFIATSTKNGIPSGRMVLLKSYGK-NGFVFFTNYNSRKGNELAENPQASLAFYWEPLKRSVRIEGHVEKTSDKE-S 128 (331)
Q Consensus 51 e~~~~~LATvd~dG~P~~R~V~~r~~~~-~gl~F~T~~~S~K~~eL~~np~val~f~~~~~~~qvri~G~a~~~~~~~-~ 128 (331)
+.++++|||++++|.|++|||.+...++ +.|||+|+..|+|+++|++||+|+++|+++...++|+|.|+|+++.+.+ .
T Consensus 17 ~~~~~~LaT~~~~G~P~~~pv~~~~~~~~~~l~f~t~~~s~k~~~l~~np~v~l~~~~~~~~~~v~v~G~a~~v~d~~~~ 96 (146)
T 2hq7_A 17 SSKIVMVGTNGENGYPNIKAMMRLKHDGLKKFWLSTNTSTRMVERLKKNNKICLYFVDDNKFAGLMLVGTIEILHDRASK 96 (146)
T ss_dssp HCSEEEEEEECGGGCEEEEEEEEEEEETTTEEEEEEECCHHHHHHHHHCCEEEEEEECSSSSEEEEEEEEEEEECCHHHH
T ss_pred cCCEEEEEEECCCCCEEEEEEEEEEEcCCCEEEEEecCCCHHHHHHhhCCeEEEEEECCCCceEEEEEEEEEEEcCHHHH
Confidence 4568999999999999999999987664 4699999999999999999999999999998889999999999987643 2
Q ss_pred hHHHhcCCccccceeecCCCCCCCCCHHHHHHHHHHH-HHhhcCCCCCCCCCceEEEEEeceEEEeeecCC
Q psy2497 129 DDYFQSRPYASKIGAIASDQSRPCESRDQMSKITEEL-RQKYKEGDYVPRPKHWGGYVVIPKVIEFWQGQS 198 (331)
Q Consensus 129 ~~~~~~~p~~~~~~~~~s~q~~~i~d~~~l~~~~~~~-~~~~~~~~~~p~P~~~~~l~v~p~~iEfwq~~~ 198 (331)
.+.| +.+ ..+++++ +.+++|++|+|.|++++||++.+
T Consensus 97 ~~~~------------------------------~~~~~~~~~~~---~~~~~~~~~~i~p~~~~~w~~~~ 134 (146)
T 2hq7_A 97 EMLW------------------------------TDGCEIYYPLG---IDDPDYTALCFTAEWGNYYRHLK 134 (146)
T ss_dssp HHHC------------------------------CTTHHHHCTTG---GGCTTEEEEEEEEEEEEEEETTE
T ss_pred HHHH------------------------------HHHHHHHCCCC---CCCCCEEEEEEEccEEEEEeCCC
Confidence 3333 222 2223333 23467999999999999998754
No 22
>2i51_A Uncharacterized conserved protein of COG5135; pyridoxamine 5'-phosphate oxidase-related protein, structura genomics; HET: MSE FMN; 1.40A {Nostoc punctiforme}
Probab=99.77 E-value=8.9e-20 Score=162.86 Aligned_cols=109 Identities=16% Similarity=0.187 Sum_probs=91.6
Q ss_pred CCCccceEEEeccCCCCCCCCCCCcCCC--CceEeeecCCCccccccchhHhhCCceEEEeecCCCCceEEEEEEeeEcC
Q psy2497 198 SDRVHDRIVFKRPVPGEPLGPHSHEGED--GWYYERLFPQPKQGIQYLHLKAENPQASLAFYWEPLKRSVRIEGHVEKTS 275 (331)
Q Consensus 198 ~~r~h~R~~f~k~~~~~~~~~~~~~~~~--gw~f~tl~pS~K~~~~~~~~l~~np~aal~f~W~~l~RQVri~G~v~~~~ 275 (331)
.|+|+.|.+..+ +.+++ |++|+|++.|+|+ ++|++||+|||+|+|+.+.|||||+|+|+.++
T Consensus 35 dG~P~~R~v~~~-----------~~d~~~~~l~F~T~~~S~K~-----~~l~~np~v~l~f~~~~~~~qvri~G~a~~v~ 98 (195)
T 2i51_A 35 NGRPANRTLVFR-----------GFLEDTNQLRFITDTRSAKA-----DQIQQQPWAEICWYFPNTREQFRMAGDLTLIS 98 (195)
T ss_dssp TSCEEEEEEECC-----------CBCTTSSCEEEEEETTSHHH-----HHHHHCCEEEEEEEETTTTEEEEEEEEEEEEC
T ss_pred CCCeeEEEEEEE-----------EEcCCCCeEEEEEcCCccHH-----HHHhhCCeEEEEEEeCCCCEEEEEEEEEEEEC
Confidence 467999999887 34554 9999999999996 37999999999999999999999999999999
Q ss_pred HHHHH--------HHHhcCCCCccc-ceecccCCCCCCCHHHHHHHHHHHHhHhcCCCCCCCCCC
Q psy2497 276 DKESD--------DYFQSRPYASKI-GAIASDQSRPCESRDQMSKITEELRQKYKEGDYVPRPKH 331 (331)
Q Consensus 276 ~~es~--------~yf~~Rp~~sqi-~a~~s~QS~~i~~r~~l~~~~~~~~~~~~~~~~vp~P~~ 331 (331)
+++++ +||++||..||+ ++|+|+| ++|.+.. +++.++|. .++|+|++
T Consensus 99 ~~~~~~~~~~~r~~~w~~~~~~sr~~~~~~spg-~~~~~~~------~~~~~~~~--~~~p~p~~ 154 (195)
T 2i51_A 99 SDDSHQDLQPARIAMWQELSDAARLQFGWPYPG-KPRIKES------GAFEPSPP--DPIEPVPN 154 (195)
T ss_dssp SSSTTGGGHHHHHHHHHHSCHHHHHGGGSCCTT-SBCCCCG------GGGCCCCC--CSSSCCTT
T ss_pred hHHhhhhhHHHHHHHHHhCChhhhhhcccCCCC-CCccchh------HHhhhhcc--CCCCCCCc
Confidence 99997 999999999999 5999996 7776443 23445565 25888875
No 23
>3ec6_A General stress protein 26; alpha-beta structure, structural genomics of niaid; HET: FAD; 1.60A {Bacillus anthracis} SCOP: b.45.1.0
Probab=99.77 E-value=2.8e-18 Score=143.87 Aligned_cols=113 Identities=13% Similarity=0.210 Sum_probs=89.3
Q ss_pred CCceEEEEeecCCCCeeEEEEEEEEeeCCeEEEEecCCCcchhhhhcCCcEEEEEEe---CCCCeEEEEEEEEEecCCcc
Q psy2497 51 EANAMFIATSTKNGIPSGRMVLLKSYGKNGFVFFTNYNSRKGNELAENPQASLAFYW---EPLKRSVRIEGHVEKTSDKE 127 (331)
Q Consensus 51 e~~~~~LATvd~dG~P~~R~V~~r~~~~~gl~F~T~~~S~K~~eL~~np~val~f~~---~~~~~qvri~G~a~~~~~~~ 127 (331)
+.++++|||++ ||.|++|||.+.. +++.|||+|+..|+|+++|++||+|+|++.+ +...++|+|.|+|+++++.+
T Consensus 14 ~~~~~~LaT~~-dg~P~~~pv~~~~-~~~~l~f~t~~~s~k~~~l~~np~v~l~v~~~~d~~~~~~v~v~G~a~~~~d~~ 91 (139)
T 3ec6_A 14 GQRTGVLSTVR-NDKPHSAFMMFFH-EDFVLYVATDRQSKKITDIENNPNVHVLLGREGKKLDEDYIEVEGLASIEEDST 91 (139)
T ss_dssp SCCEEEEEEEE-TTEEEEEEEECEE-ETTEEEEEEETTCHHHHHHHHCCEEEEEECC---CTTCCEEEEEEEEEEECCHH
T ss_pred cCCEEEEEEec-CCCEEEEEEEEEE-eCCEEEEEECCCCHHHHHHHhCCcEEEEEEecCCCCCccEEEEEEEEEEEcCHH
Confidence 66789999999 9999999999985 6668999999999999999999999999843 35578999999999987643
Q ss_pred -hhHHHhcCCccccceeecCCCCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCCceEEEEEeceEEEeeecCC
Q psy2497 128 -SDDYFQSRPYASKIGAIASDQSRPCESRDQMSKITEELRQKYKEGDYVPRPKHWGGYVVIPKVIEFWQGQS 198 (331)
Q Consensus 128 -~~~~~~~~p~~~~~~~~~s~q~~~i~d~~~l~~~~~~~~~~~~~~~~~p~P~~~~~l~v~p~~iEfwq~~~ 198 (331)
.+++|.. .++.+| ++. ..+++++|+|.|.+++||+..+
T Consensus 92 ~~~~~~~~-----------------------------~~~~~~-~~~---~~~~~~~i~i~p~~~~~~d~~g 130 (139)
T 3ec6_A 92 LKNKFWNN-----------------------------SLKRWL-LRP---EDPNYVLIKINPDTIYYIDGAG 130 (139)
T ss_dssp HHHHHCCG-----------------------------GGGGTC-SST---TCTTEEEEEEEEEEEEEEC---
T ss_pred HHHHHHHH-----------------------------HHHHHh-CCC---CCCCEEEEEEEeeEEEEEcCCC
Confidence 4556631 112344 232 3467999999999999998865
No 24
>3db0_A LIN2891 protein; putative pyridoxamine 5'-phosphate oxidase, STR genomics, joint center for structural genomics, JCSG; 2.00A {Listeria innocua}
Probab=99.75 E-value=1.2e-17 Score=137.60 Aligned_cols=111 Identities=14% Similarity=0.232 Sum_probs=81.4
Q ss_pred CCceEEEEeecCCCCeeEEEEEEEEeeCCeEEEEecCCCcchhhhhcCCcEEEEEEe-CCCCeEEEEEEEEEecCCcchh
Q psy2497 51 EANAMFIATSTKNGIPSGRMVLLKSYGKNGFVFFTNYNSRKGNELAENPQASLAFYW-EPLKRSVRIEGHVEKTSDKESD 129 (331)
Q Consensus 51 e~~~~~LATvd~dG~P~~R~V~~r~~~~~gl~F~T~~~S~K~~eL~~np~val~f~~-~~~~~qvri~G~a~~~~~~~~~ 129 (331)
+.++++|||++ +|.|++|||.+.. +++.|||+|+..|+|+++|++||+|+|++.+ +...++|+|.|+|+++.+.
T Consensus 16 ~~~~~~LaT~~-~g~P~~~pv~~~~-~~~~l~f~t~~~s~k~~~l~~np~v~l~v~~~~~~~~~v~v~G~a~~v~d~--- 90 (128)
T 3db0_A 16 QHQVGVLTSVQ-GDFPHARYMTFLH-DGLTLYTPSGKELPKTEEVRRNPHVCVLIGYDSPGSAFLEINGLASLEEDE--- 90 (128)
T ss_dssp TCCEEEEEEEE-TTEEEEEEEECEE-ETTEEEEEC----CTTCCCCCCCEEEEEECCCSTTCCEEEEEEEEEECCCH---
T ss_pred hCCEEEEEEec-CCCEEEEEEEEEe-cCCEEEEEECCCCHHHHHHHhCCceEEEEEEcCCCCcEEEEEEEEEEEcCH---
Confidence 67889999997 7999999999985 6668999999999999999999999999765 6677999999999997643
Q ss_pred HHHhcCCccccceeecCCCCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCCceEEEEEeceEEEeee
Q psy2497 130 DYFQSRPYASKIGAIASDQSRPCESRDQMSKITEELRQKYKEGDYVPRPKHWGGYVVIPKVIEFWQ 195 (331)
Q Consensus 130 ~~~~~~p~~~~~~~~~s~q~~~i~d~~~l~~~~~~~~~~~~~~~~~p~P~~~~~l~v~p~~iEfwq 195 (331)
+...+.|+.+...|.++. ..+++++|+|.|++++||.
T Consensus 91 --------------------------~~~~~~~~~~~~~~~~~~---~~~~~~~~ri~p~~~~~~~ 127 (128)
T 3db0_A 91 --------------------------SIKERIWENISKDWFQGE---DSPSFVVIKIVPEQIRILN 127 (128)
T ss_dssp --------------------------HHHHHHHHHHCSSCCC---------CCEEEEEEEEEEEEC
T ss_pred --------------------------HHHHHHHHHHHHHhCCCC---CCCCEEEEEEEeEEEEEec
Confidence 333333333222222222 3367999999999999994
No 25
>2fhq_A Putative general stress protein; alpha-beta structure, structural genomics, PSI, protein STRU initiative; HET: MSE; 1.87A {Bacteroides thetaiotaomicron} SCOP: b.45.1.1
Probab=99.70 E-value=1.8e-16 Score=132.16 Aligned_cols=112 Identities=19% Similarity=0.265 Sum_probs=89.9
Q ss_pred CCceEEEEeecCCCCeeEEEEEEEEeeC-CeEEEEecCCCcchhhhhcCCcEEEEEEeCCCCeEEEEEEEEEecCCcc-h
Q psy2497 51 EANAMFIATSTKNGIPSGRMVLLKSYGK-NGFVFFTNYNSRKGNELAENPQASLAFYWEPLKRSVRIEGHVEKTSDKE-S 128 (331)
Q Consensus 51 e~~~~~LATvd~dG~P~~R~V~~r~~~~-~gl~F~T~~~S~K~~eL~~np~val~f~~~~~~~qvri~G~a~~~~~~~-~ 128 (331)
+..+++|||++++|.|++++|.+...++ +.|||+|+..|+|+++|++||+|+++|.++. ++|+|.|+|+++++.+ .
T Consensus 19 ~~~~~~LaT~~~~G~P~~~pv~~~~~~~~~~l~f~t~~~s~k~~~l~~np~v~l~~~~~~--~~v~v~G~a~~v~d~~~~ 96 (141)
T 2fhq_A 19 KCEVVTLASVNKEGYPRPVPMSKIAAEGISTIWMSTGADSLKTIDFLSNPKAGLCFQEKG--DSVALMGEVEVVTDEKLK 96 (141)
T ss_dssp TCSEEEEEEECTTSCEEEEEEECCEEETTTEEEEEEETTSHHHHHHHHCCEEEEEEEETT--EEEEEEEEEEEECCHHHH
T ss_pred cCCEEEEEEECCCCCEEEEeeEEEEeCCCCeEEEEeCCCCHHHHHHHhCCcEEEEEEeCC--CEEEEEEEEEEECCHHHH
Confidence 4678999999999999999999976665 5799999999999999999999999999876 6999999999988642 3
Q ss_pred hHHHhcCCccccceeecCCCCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCCceEEEEEeceEEEeeec
Q psy2497 129 DDYFQSRPYASKIGAIASDQSRPCESRDQMSKITEELRQKYKEGDYVPRPKHWGGYVVIPKVIEFWQG 196 (331)
Q Consensus 129 ~~~~~~~p~~~~~~~~~s~q~~~i~d~~~l~~~~~~~~~~~~~~~~~p~P~~~~~l~v~p~~iEfwq~ 196 (331)
+++|... +..+|+++. ..+.+++|+|+|.+++||++
T Consensus 97 ~~~~~~~-----------------------------~~~~~p~~~---~~~~~~~~~i~p~~~~~~~~ 132 (141)
T 2fhq_A 97 QELWQDW-----------------------------FIEHFPGGP---TDPGYVLLKFTANHATYWIE 132 (141)
T ss_dssp HHSCCGG-----------------------------GGGTCTTCT---TCTTEEEEEEEEEEEEEEET
T ss_pred HHHHHHH-----------------------------HHHHcCCCC---CCCCEEEEEEEcCEEEEeeC
Confidence 4444211 112333332 23579999999999999987
No 26
>1vl7_A Hypothetical protein ALR5027; structural genomics, joint center for structural genomics, J protein structure initiative, PSI, oxidoreductase; 1.50A {Nostoc SP} SCOP: b.45.1.1
Probab=99.68 E-value=1.3e-16 Score=136.74 Aligned_cols=77 Identities=14% Similarity=0.240 Sum_probs=67.9
Q ss_pred CCCceEEEEeecCCCCeeEEEEEEEEeeCCeEEEEecCCCcchhhhhcCCcEEEEEEeCCC-------CeEEEEEEEEEe
Q psy2497 50 IEANAMFIATSTKNGIPSGRMVLLKSYGKNGFVFFTNYNSRKGNELAENPQASLAFYWEPL-------KRSVRIEGHVEK 122 (331)
Q Consensus 50 ~e~~~~~LATvd~dG~P~~R~V~~r~~~~~gl~F~T~~~S~K~~eL~~np~val~f~~~~~-------~~qvri~G~a~~ 122 (331)
.+.++++|||+++||.|++++|.+...+++++||+|+..|+|+++|++||+|+|+|.++.. .++|+|.|+|++
T Consensus 28 ~~~~~~~LaTv~~dG~P~~~~v~~~~~~~g~~~f~t~~~s~k~~nl~~np~vsl~v~~~~~~~~~~~~~~~v~i~G~a~~ 107 (157)
T 1vl7_A 28 QEFQSAIISTISEQGIPNGSYAPFVIDDAKNIYIYVSGLAVHTKNIEANPLVNVLFVDDEAKTNQIFARRRLSFDCTATL 107 (157)
T ss_dssp TTCSEEEEEEECTTSCEEEEEEEEEECTTCCEEEEECTTSHHHHHHHHCCEEEEEEECCGGGCSSGGGCCEEEEEEEEEE
T ss_pred HhCCEEEEEEECCCCCEEEEEEEEEEcCCCCEEEEEeCccHHHHHHHhCCcEEEEEEcCccccCCcccCceEEEEEEEEE
Confidence 3678999999999999999999987544457999999999999999999999999998652 478999999999
Q ss_pred cCCc
Q psy2497 123 TSDK 126 (331)
Q Consensus 123 ~~~~ 126 (331)
++++
T Consensus 108 v~~~ 111 (157)
T 1vl7_A 108 IERE 111 (157)
T ss_dssp ECTT
T ss_pred cCCC
Confidence 8764
No 27
>2ou5_A Pyridoxamine 5'-phosphate oxidase-related, FMN-BI; split barrel-like fold, structural genomics, joint center FO structural genomics, JCSG; HET: MSE FMN; 1.60A {Jannaschia SP}
Probab=99.65 E-value=2.3e-17 Score=144.83 Aligned_cols=88 Identities=13% Similarity=0.168 Sum_probs=78.4
Q ss_pred CCCccceEEEeccCCCCCCCCCCCcC--CCCceEeeecCCCccccccchhHhhCCceEEEeecCCCCceEEEEEEeeEcC
Q psy2497 198 SDRVHDRIVFKRPVPGEPLGPHSHEG--EDGWYYERLFPQPKQGIQYLHLKAENPQASLAFYWEPLKRSVRIEGHVEKTS 275 (331)
Q Consensus 198 ~~r~h~R~~f~k~~~~~~~~~~~~~~--~~gw~f~tl~pS~K~~~~~~~~l~~np~aal~f~W~~l~RQVri~G~v~~~~ 275 (331)
.| ++.|.+..+ +++ +++++|+|++.|+|+ ++|++||+|+|+|+|+.+.|||||+|+|+.++
T Consensus 40 dG-P~~R~v~~~-----------~~~~~~~~l~F~T~~~s~K~-----~~l~~nP~v~l~f~~~~~~~qvri~G~a~~~~ 102 (175)
T 2ou5_A 40 DG-PDLRTLVLR-----------AASHAEATLEFHTDAASPKV-----AHIRRDARVAIHIWIPKASLQVRAKAIAKILP 102 (175)
T ss_dssp TE-EEEEECCCC-----------EEETTTTEEEEEEETTSHHH-----HHHHHCCEEEEEEEEGGGTEEEEEEEEEEEEE
T ss_pred CC-CceeEEEEE-----------EEEcCCCEEEEEECCCChHH-----HHHhhCCcEEEEEEeCCCCEEEEEEEEEEEeC
Confidence 46 888888665 233 378999999999996 37999999999999999999999999999998
Q ss_pred HHHHHHHHhcCCCCcccceeccc-CCCCCCC
Q psy2497 276 DKESDDYFQSRPYASKIGAIASD-QSRPCES 305 (331)
Q Consensus 276 ~~es~~yf~~Rp~~sqi~a~~s~-QS~~i~~ 305 (331)
++ ++||++||++||++ |+|+ ||.++++
T Consensus 103 d~--~~~w~~~~~~~~~~-~~~~~~~~~~~~ 130 (175)
T 2ou5_A 103 GD--PNLFAQLPEAARMN-YQGPVPGTPLPA 130 (175)
T ss_dssp CC--HHHHHHSCHHHHGG-GSSSCTTCBSSC
T ss_pred cH--HHHHHHCCHhHHhc-ccCCCCCCcccc
Confidence 88 99999999999999 8884 9999987
No 28
>2asf_A Hypothetical protein RV2074; H37RV, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: CIT; 1.60A {Mycobacterium tuberculosis} SCOP: b.45.1.1
Probab=99.64 E-value=4.4e-15 Score=124.02 Aligned_cols=112 Identities=17% Similarity=0.081 Sum_probs=90.4
Q ss_pred CCCceEEEEeecCCCCeeEEEEEEEEeeC--CeEEEEecCCCcchhhhhcCCcEEEEEEeCCCCeEEEEEEEEEecCCcc
Q psy2497 50 IEANAMFIATSTKNGIPSGRMVLLKSYGK--NGFVFFTNYNSRKGNELAENPQASLAFYWEPLKRSVRIEGHVEKTSDKE 127 (331)
Q Consensus 50 ~e~~~~~LATvd~dG~P~~R~V~~r~~~~--~gl~F~T~~~S~K~~eL~~np~val~f~~~~~~~qvri~G~a~~~~~~~ 127 (331)
.+.++++|||++.||.|++++|.+. +++ +.|||+|+..|+|+++|++||+|+++++++. ++++|.|+|+++++
T Consensus 19 ~~~~~~~LaT~~~dG~P~~~pv~~~-~~~~~~~l~f~t~~~s~k~~~l~~np~V~l~~~~~~--~~v~v~G~a~~~~d-- 93 (137)
T 2asf_A 19 SERHLAMLTTLRADNSPHVVAVGFT-FDPKTHIARVITTGGSQKAVNADRSGLAVLSQVDGA--RWLSLEGRAAVNSD-- 93 (137)
T ss_dssp TSSCCEEEEEECTTSCEEEEEECCE-EETTTTEEEEEEETTCHHHHHHHHHCEEEEEEEETT--EEEEEEEEEEEECC--
T ss_pred hCCCeEEEEEECCCCCEEEEEEEEE-EECCCCEEEEEeCCCCHHHHHHhhCCeEEEEEECCC--CEEEEEEEEEEecC--
Confidence 3678899999999999999999996 554 4699999999999999999999999998754 88999999998653
Q ss_pred hhHHHhcCCccccceeecCCCCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCCceEEEEEeceEEEeeec
Q psy2497 128 SDDYFQSRPYASKIGAIASDQSRPCESRDQMSKITEELRQKYKEGDYVPRPKHWGGYVVIPKVIEFWQG 196 (331)
Q Consensus 128 ~~~~~~~~p~~~~~~~~~s~q~~~i~d~~~l~~~~~~~~~~~~~~~~~p~P~~~~~l~v~p~~iEfwq~ 196 (331)
.++..+.++.+..+|+.+ .+ .+.+++|+|.|+++..|..
T Consensus 94 ---------------------------~~~~~~~~~~~~~~~~~~--~~-~~~~~viri~~~~v~g~~~ 132 (137)
T 2asf_A 94 ---------------------------IDAVRDAELRYAQRYRTP--RP-NPRRVVIEVQIERVLGSAD 132 (137)
T ss_dssp ---------------------------HHHHHHHHHHHHHHSCCC--CC-CTTEEEEEEEEEEEEECTT
T ss_pred ---------------------------HHHHHHHHHHHHHhcCcc--cC-CCCEEEEEEEEEEEEEecc
Confidence 344444455555666433 22 3568999999999998854
No 29
>3f7e_A Pyridoxamine 5'-phosphate oxidase-related, FMN- binding; F420 dependent reductase, unknown function; HET: MSE; 1.23A {Mycobacterium smegmatis}
Probab=99.58 E-value=1.2e-14 Score=120.22 Aligned_cols=114 Identities=15% Similarity=0.124 Sum_probs=87.0
Q ss_pred CCceEEEEeecCCCCeeEEEEEEEEeeCCeEEEEecCCCcchhhhhcCCcEEEEEEeCCC-CeEEEEEEEEEecCCcchh
Q psy2497 51 EANAMFIATSTKNGIPSGRMVLLKSYGKNGFVFFTNYNSRKGNELAENPQASLAFYWEPL-KRSVRIEGHVEKTSDKESD 129 (331)
Q Consensus 51 e~~~~~LATvd~dG~P~~R~V~~r~~~~~gl~F~T~~~S~K~~eL~~np~val~f~~~~~-~~qvri~G~a~~~~~~~~~ 129 (331)
+..+++|||+++||.|++++|.+. ++++.|||+|+..|+|+++|++||+|+|++.++.. .++|+|.|+|+.+++++.
T Consensus 14 ~~~~~~LaT~~~dG~P~~~pv~~~-~d~~~l~f~t~~~s~k~~~l~~np~v~l~v~~~~~~~~~v~v~G~a~~v~~~~~- 91 (131)
T 3f7e_A 14 RPLYGHLATVRPDGTPQVNAMWFA-WDGEVLRFTHTTKRQKYRNIKANPAVAMSVIDPDNPYRYLEVRGLVEDIVPDPT- 91 (131)
T ss_dssp SCCCEEEEEECTTSCEEEEEECCE-ECSSCEEEEEETTSHHHHHHHHCCEEEEEEECSSCTTCEEEEEEEEEEEEECTT-
T ss_pred CCCcEEEEEECCCCCEEEEEEEEE-EECCEEEEEECCCCHHHHHHhhCCcEEEEEEcCCCCeeEEEEEEEEEEeccCcc-
Confidence 567899999999999999999986 56667999999999999999999999999998764 689999999988764321
Q ss_pred HHHhcCCccccceeecCCCCCCCCCHHHHHHHHHHHHHhhcCCC--CCCCCCceEEEEEeceEEEeee
Q psy2497 130 DYFQSRPYASKIGAIASDQSRPCESRDQMSKITEELRQKYKEGD--YVPRPKHWGGYVVIPKVIEFWQ 195 (331)
Q Consensus 130 ~~~~~~p~~~~~~~~~s~q~~~i~d~~~l~~~~~~~~~~~~~~~--~~p~P~~~~~l~v~p~~iEfwq 195 (331)
.. ..+.+.++|.... .....+..++|+|.|+++-.|.
T Consensus 92 -------------------------~~----~~~~l~~ky~~~~~~~~~~~~~~~v~ri~~~~~~gk~ 130 (131)
T 3f7e_A 92 -------------------------GA----FYLKLNDRYDGPLTEPPADKADRVIIVVRPTAFSKQV 130 (131)
T ss_dssp -------------------------CH----HHHHHHHHTTCSCCSCCTTGGGEEEEEEEEEEEECC-
T ss_pred -------------------------HH----HHHHHHHHhCCcccCCCCCCCCEEEEEEEeEEEEeec
Confidence 11 1223344443211 0112356899999999998763
No 30
>3ba3_A Protein LP_0091, pyridoxamine 5'-phosphate oxidase-like protein; NP_783940.1, structural genomics; HET: MSE; 1.55A {Lactobacillus plantarum WCFS1}
Probab=99.58 E-value=6.1e-15 Score=125.72 Aligned_cols=114 Identities=12% Similarity=0.114 Sum_probs=89.8
Q ss_pred CCceEEEEeecCCCCeeEEEEEEEEee--CCeEEEEecCCCcchhhhhcCCcEEEEEEeCCC---CeEEEEE-EEEEecC
Q psy2497 51 EANAMFIATSTKNGIPSGRMVLLKSYG--KNGFVFFTNYNSRKGNELAENPQASLAFYWEPL---KRSVRIE-GHVEKTS 124 (331)
Q Consensus 51 e~~~~~LATvd~dG~P~~R~V~~r~~~--~~gl~F~T~~~S~K~~eL~~np~val~f~~~~~---~~qvri~-G~a~~~~ 124 (331)
+.+.+.|||++ +|.|++|+|.+..++ ++.|||.|+.+|+|++||.+||+|++|.+.++. ..+||++ |+|+..+
T Consensus 13 ~~~~~~LAT~~-~g~P~vR~v~f~~~~~~~~~LYF~T~~~k~k~~ql~~Np~V~i~~~~~d~~~~~~~IRi~~G~a~~~~ 91 (145)
T 3ba3_A 13 STNKIALSTAV-NNEADVKIVNFVWYEAQPDTLYFSSVKTSPALKVYDQNPDIAFITIPNDGTAGNPYLRAQHVKLQRST 91 (145)
T ss_dssp TEEEEEEEEEE-TTEEEEEEEECEECTTSTTEEEEEEETTCTHHHHHTTCCEEEEEEEECTTCTTCCEEEEEEEEEEECS
T ss_pred hCCcEEEEECC-CCCEEEEEEEEEEEecCCCEEEEEECCCCHHHHHHHhCCCEEEEEECCCCCccceEEEEEeEEEEEcC
Confidence 56789999965 899999999998554 457999999999999999999999999998776 6899999 9999976
Q ss_pred C---cchhHHHhcCCccccceeecCCCCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCCceEEEEEeceEEEeeecC
Q psy2497 125 D---KESDDYFQSRPYASKIGAIASDQSRPCESRDQMSKITEELRQKYKEGDYVPRPKHWGGYVVIPKVIEFWQGQ 197 (331)
Q Consensus 125 ~---~~~~~~~~~~p~~~~~~~~~s~q~~~i~d~~~l~~~~~~~~~~~~~~~~~p~P~~~~~l~v~p~~iEfwq~~ 197 (331)
+ +-.+.+|...|. ++..|+.. + +++++|.|.|.++.+-...
T Consensus 92 ~~~~~~k~~~~e~~P~---------------------------~k~~y~~~----~-~~l~vf~i~~~~a~~~~~~ 135 (145)
T 3ba3_A 92 KTMTDLLPQYLETVPN---------------------------YQQVWDAI----G-STLVVFELKLTDLFVDAGV 135 (145)
T ss_dssp CCHHHHHHHHHHHSTT---------------------------HHHHHHHH----G-GGEEEEEEECSEEEEECCT
T ss_pred CchHHHHHHHHHhChh---------------------------hhhcccCC----C-CcEEEEEEECCEEEEECCC
Confidence 3 222455554432 33445321 2 3799999999999998743
No 31
>1rfe_A Hypothetical protein RV2991; structural genomics, TB, FMN BIN PSI, protein structure initiative, TB structural genomics consortium; 2.00A {Mycobacterium tuberculosis} SCOP: b.45.1.1
Probab=99.56 E-value=8.4e-14 Score=118.74 Aligned_cols=123 Identities=15% Similarity=0.115 Sum_probs=87.2
Q ss_pred CceEEEEeecCCCCeeEEEEEEEEeeCCeEEEEecCCCcchhhhhcCCcEEEEEEeCCC---CeEEEEEEEEEecCCcc-
Q psy2497 52 ANAMFIATSTKNGIPSGRMVLLKSYGKNGFVFFTNYNSRKGNELAENPQASLAFYWEPL---KRSVRIEGHVEKTSDKE- 127 (331)
Q Consensus 52 ~~~~~LATvd~dG~P~~R~V~~r~~~~~gl~F~T~~~S~K~~eL~~np~val~f~~~~~---~~qvri~G~a~~~~~~~- 127 (331)
..+++|||++++|.|++++|.+. ++++.|||+|+..|+|+++|++||+|+++|..+.. .+.|+|.|+|+++++++
T Consensus 22 ~~~~~LaT~~~~G~P~~~pv~~~-~~~~~l~~~t~~~~~k~~~l~~np~v~l~~~~~~~~~~~~~v~~~G~a~~v~d~~~ 100 (162)
T 1rfe_A 22 SRTGTLATIGPDGQPHLTAMWYA-VIDGEIWLETKAKSQKAVNLRRDPRVSFLLEDGDTYDTLRGVSFEGVAEIVEEPEA 100 (162)
T ss_dssp CCCEEEEEECTTSCEEEEEECCE-EETTEEEEEEETTSHHHHHHHHCCEEEEEEEECSSGGGCEEEEEEEEEEEECCHHH
T ss_pred CcEEEEEEECCCCCEEEEEEEEE-EECCEEEEEecCccHHHHHHhhCCeEEEEEEcCCCcccccEEEEEEEEEEeCChHH
Confidence 45699999999999999999996 56667999999999999999999999999987654 26799999999987643
Q ss_pred hhHHHhcCCccccceeecCCCCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCCceEEEEEeceEEEeeecCC
Q psy2497 128 SDDYFQSRPYASKIGAIASDQSRPCESRDQMSKITEELRQKYKEGDYVPRPKHWGGYVVIPKVIEFWQGQS 198 (331)
Q Consensus 128 ~~~~~~~~p~~~~~~~~~s~q~~~i~d~~~l~~~~~~~~~~~~~~~~~p~P~~~~~l~v~p~~iEfwq~~~ 198 (331)
..+.|..... .|.. + .... +..+. +. ..+.+++|+|.|+++++|+...
T Consensus 101 ~~~~~~~l~~-----~~~~--~-~~~~-------~~~~~----~~----~~~~~~v~~i~~~~~~~~~~~~ 148 (162)
T 1rfe_A 101 LHRVGVSVWE-----RYTG--P-YTDE-------CKPMV----DQ----MMNKRVGVRIVARRTRSWDHRK 148 (162)
T ss_dssp HHHHHHHHHH-----HHTC--C-CCGG-------GHHHH----HH----HTTTEEEEEEEEEEEEEEEGGG
T ss_pred HHHHHHHHHH-----HhcC--c-ccch-------hHHHH----Hh----ccCceEEEEEEEEEEEEecccc
Confidence 2333321100 0000 0 0000 00110 00 1246999999999999998743
No 32
>2aq6_A Pyridoxine 5'-phosphate oxidase; pyridoxal 5'-phosphate, STR genomics, PSI, protein structure initiative, TB structural consortium; HET: PLP; 1.70A {Mycobacterium tuberculosis} SCOP: b.45.1.1 PDB: 1xxo_A 1y30_A* 1w9a_A*
Probab=99.50 E-value=1.8e-13 Score=114.71 Aligned_cols=75 Identities=17% Similarity=0.104 Sum_probs=67.7
Q ss_pred CCceEEEEeecCCCCeeEEEEEEEEeeCC--eEEEEecCCCcchhhhhcCCcEEEEEEeCCCCeEEEEEEEEEecCCc
Q psy2497 51 EANAMFIATSTKNGIPSGRMVLLKSYGKN--GFVFFTNYNSRKGNELAENPQASLAFYWEPLKRSVRIEGHVEKTSDK 126 (331)
Q Consensus 51 e~~~~~LATvd~dG~P~~R~V~~r~~~~~--gl~F~T~~~S~K~~eL~~np~val~f~~~~~~~qvri~G~a~~~~~~ 126 (331)
+..+++|||++.||.|++++|.+. ++++ .|||+|+..|+|+++|++||+|+++|..+....+|+|.|+|+++++.
T Consensus 16 ~~~~~~LaT~~~~G~P~~~pv~~~-~~~~~~~l~~~t~~~~~k~~~l~~np~v~l~~~~~~~~~~v~v~G~a~~~~d~ 92 (147)
T 2aq6_A 16 GNSIGVLATIKHDGRPQLSNVQYH-FDPRKLLIQVSIAEPRAKTRNLRRDPRASILVDADDGWSYAVAEGTAQLTPPA 92 (147)
T ss_dssp TCSEEEEEEECTTSCEEEEEEECE-EETTTTEEEEEEETTSHHHHHHHHCCEEEEEEECTTSSCEEEEEEECEECCCC
T ss_pred cCCeEEEEEECCCCCEEEEEEEEE-EcCCCCEEEEEecCCCHHHHHHhhCCcEEEEEEcCCCcEEEEEEEEEEEcCCC
Confidence 567899999999999999999996 5655 59999999999999999999999999987766889999999998864
No 33
>2htd_A Predicted flavin-nucleotide-binding protein from family structurally related to pyridoxine...; putative pyridoxamine 5'-phosphate oxidase; HET: MSE; 1.60A {Lactobacillus delbrueckii subsp}
Probab=99.43 E-value=5.3e-13 Score=112.46 Aligned_cols=74 Identities=15% Similarity=0.184 Sum_probs=66.9
Q ss_pred ceEEEEeecCCCCeeEEEEEEEE-eeCCeEEEEecCCCcchhhhhcCCcEEEEEEeCCCCeEEEEEEEEEecCCc
Q psy2497 53 NAMFIATSTKNGIPSGRMVLLKS-YGKNGFVFFTNYNSRKGNELAENPQASLAFYWEPLKRSVRIEGHVEKTSDK 126 (331)
Q Consensus 53 ~~~~LATvd~dG~P~~R~V~~r~-~~~~gl~F~T~~~S~K~~eL~~np~val~f~~~~~~~qvri~G~a~~~~~~ 126 (331)
.+++|||+|+||.|+++++.+.. .+++.|||+|...++|+++|++||+|+|+|+++...++++|.|+|+++++.
T Consensus 39 ~~~~LATv~~dG~P~~~p~~f~~~~d~~~l~f~~~~~~~k~~nL~~np~V~l~~~~~~~~~~v~i~G~a~~v~d~ 113 (140)
T 2htd_A 39 NLVYLATVDADGNPQVGPKGSMTVLDPSHLQYLEKTKGEAYENIKRGSKVALVAADVPSHTAVRVLATAEVHEDD 113 (140)
T ss_dssp SCEEEEEECTTCCEEEEEETTCEEEETTEEEEEESSCCHHHHHHHTTCCEEEEEEETTTTEEEEEEEEEEEESSS
T ss_pred CCEEEEEECCCCCEEEecceeEEecCCCEEEEeccCCchHHHHhhcCCeEEEEEEecCCCCEEEEEEEEEEecCh
Confidence 36999999999999999998854 456689999999999999999999999999999989999999999987654
No 34
>2q9k_A Uncharacterized protein; split barrel-like fold, structural genomics, joint center FO structural genomics, JCSG; HET: UNL; 1.59A {Exiguobacterium sibiricum}
Probab=99.35 E-value=3.3e-12 Score=109.30 Aligned_cols=73 Identities=14% Similarity=0.185 Sum_probs=64.9
Q ss_pred CCceEEEEeecCC-CCeeEEEEEE-EEeeCCeEEEEecCCCcchhhhhcCCcEEEEEEeCCCCeEEEEEEEEEecCC
Q psy2497 51 EANAMFIATSTKN-GIPSGRMVLL-KSYGKNGFVFFTNYNSRKGNELAENPQASLAFYWEPLKRSVRIEGHVEKTSD 125 (331)
Q Consensus 51 e~~~~~LATvd~d-G~P~~R~V~~-r~~~~~gl~F~T~~~S~K~~eL~~np~val~f~~~~~~~qvri~G~a~~~~~ 125 (331)
+.++++|||+++| |.|+++++.+ ...+++.|||+|+..++|+++|++||+|+|+|..++ ..++|+|+|+++.+
T Consensus 20 ~~~~~~LATv~~d~G~P~~sp~~~~~~~d~~~l~f~~~~~~~k~~nl~~np~Vsl~v~~~~--~~~~i~G~A~~v~d 94 (151)
T 2q9k_A 20 DLPLVFLITHDQSKSWPITHAISWVYAKDETTIRFAIEADSLLVKTLADHPVFTLIFFADQ--STYSLTCTDVAAWE 94 (151)
T ss_dssp SCCCEEEEECCTTSSSCEEEEECCEEEEETTEEEEEEETTCTHHHHHHHSCCEEEEEEETT--EEEEEEEEEEEEEC
T ss_pred cCCEEEEEEEcCCCCcEeEeeeEEEEEeCCCEEEEEECCCcHHHHHHHhCCcEEEEEECCC--CEEEEEEEEEEEeC
Confidence 5678999999999 9999999944 456777899999999999999999999999999765 47899999998775
No 35
>3tgv_A Heme-binding protein HUTZ; 2.00A {Vibrio cholerae}
Probab=99.34 E-value=5.9e-12 Score=107.14 Aligned_cols=75 Identities=16% Similarity=0.284 Sum_probs=65.4
Q ss_pred CCceEEEEeecCCCCeeEEEEEEEEeeCCeEEEEecCCCcchhhhhcCCcEEEEEEeCCC-------CeEEEEEEEEEec
Q psy2497 51 EANAMFIATSTKNGIPSGRMVLLKSYGKNGFVFFTNYNSRKGNELAENPQASLAFYWEPL-------KRSVRIEGHVEKT 123 (331)
Q Consensus 51 e~~~~~LATvd~dG~P~~R~V~~r~~~~~gl~F~T~~~S~K~~eL~~np~val~f~~~~~-------~~qvri~G~a~~~ 123 (331)
+.++++|||+++||.|++.+|.+- .+++++||+|+..|+|.++|++||+|+|++..+.. ..-+.+.|+|+.+
T Consensus 13 ~~~~~~LaT~~~~G~P~~s~v~~~-~~~~~~~~~~s~~~~~~~nl~~~prvsl~v~~~~~~~~~~~~~~rltl~G~a~~v 91 (148)
T 3tgv_A 13 ERKTLQLATVDAQGRPNVSYAPFV-QNQEGYFVLISHIARHARNLEVNPQVSIMMIEDETEAKQLFARKRLTFDAVASMV 91 (148)
T ss_dssp HCCEEEEEEECTTCCEEEEEEEEE-EETTEEEEEEETTSHHHHHHHHSCEEEEEEECCGGGCSCGGGCCEEEEEEEEEEE
T ss_pred hCCEEEEEEECCCCCEEEEEEEEE-EECCEEEEEECCccHHHHHHHhCCCeEEEEecCcccccCcccceEEEEeeeEEEc
Confidence 567899999999999999999985 56778999999999999999999999999986542 2459999999998
Q ss_pred CCc
Q psy2497 124 SDK 126 (331)
Q Consensus 124 ~~~ 126 (331)
.++
T Consensus 92 ~~~ 94 (148)
T 3tgv_A 92 ERD 94 (148)
T ss_dssp CTT
T ss_pred CCC
Confidence 753
No 36
>2arz_A Hypothetical protein PA4388; hypothetical protein,structural genomics,MCSG, PSI, protein structure initiative; 2.00A {Pseudomonas aeruginosa} SCOP: b.45.1.1
Probab=99.33 E-value=2e-11 Score=111.68 Aligned_cols=116 Identities=16% Similarity=0.222 Sum_probs=87.9
Q ss_pred CCceEEEEeecC--CCCeeEEEEEEEEeeCCe-EEEEecCCCcchhhhhcCCcEEEEEEeCCC-----CeEEEEEEEEEe
Q psy2497 51 EANAMFIATSTK--NGIPSGRMVLLKSYGKNG-FVFFTNYNSRKGNELAENPQASLAFYWEPL-----KRSVRIEGHVEK 122 (331)
Q Consensus 51 e~~~~~LATvd~--dG~P~~R~V~~r~~~~~g-l~F~T~~~S~K~~eL~~np~val~f~~~~~-----~~qvri~G~a~~ 122 (331)
..+.++|||+++ ||.|++.+|.+. ++.+| +||+|+..|+|+++|++||+|+|++..+.. ...|+|.|+++.
T Consensus 18 ~~~~~~LaT~~~~~dG~P~~s~v~~~-~d~~g~~~f~~s~~s~k~~nl~~nprvsl~v~~~~~~~~~~~~~v~l~G~a~~ 96 (247)
T 2arz_A 18 KEYRAVLSTHSKKWPGFPFGSVVPYC-LDAEGRPLILISRIAQHTHNLQADPRCSMLVGERGAEDIQAVGRLTLLAEARQ 96 (247)
T ss_dssp HCSEEEEEEECSSSTTCEEEEEEECE-ECTTSCEEEEEETTSHHHHHHHHCCEEEEEEECTTCSSTTSSCEEEEEEEEEE
T ss_pred hCCEEEEEEcCCCCCCcceEEEEEEE-ECCCCCEEEEEeChhHHHHHHHhCCCeEEEEecCCCCChhhCceEEEEEEEEE
Confidence 456799999998 999999999875 55555 999999999999999999999999987652 247999999999
Q ss_pred cCCcchhHHHhcCCccccceeecCCCCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCCceEEEEEeceEEEeeecC
Q psy2497 123 TSDKESDDYFQSRPYASKIGAIASDQSRPCESRDQMSKITEELRQKYKEGDYVPRPKHWGGYVVIPKVIEFWQGQ 197 (331)
Q Consensus 123 ~~~~~~~~~~~~~p~~~~~~~~~s~q~~~i~d~~~l~~~~~~~~~~~~~~~~~p~P~~~~~l~v~p~~iEfwq~~ 197 (331)
+++++ . ......+..+|++.......++|.+|+|.|+++.||.+-
T Consensus 97 v~d~e-~-----------------------------~~~~~~~~~~~P~~~~~~~~~~~~l~rl~~~~~~~~~gf 141 (247)
T 2arz_A 97 LAEEE-V-----------------------------AAAAERYYRYFPESADYHRVHDFDFWVLQPVQWRFIGGF 141 (247)
T ss_dssp CCHHH-H-----------------------------HHHHHHHHHHCGGGTTCBTTBBEEEEEEEEEEEEEECTT
T ss_pred CCcHH-H-----------------------------HHHHHHHHHHCcChhhcccccCcEEEEEEEEEEEEEcCC
Confidence 76422 1 111223344555432122346799999999999999754
No 37
>3cp3_A Uncharacterized protein; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Corynebacterium diphtheriae nctc 13129ORGANISM_TAXID}
Probab=99.26 E-value=4e-11 Score=101.35 Aligned_cols=109 Identities=10% Similarity=-0.074 Sum_probs=79.7
Q ss_pred CCceEEEEeecCCCCeeEEEEEEEEe-e--CCeEEEEecCCCcchhhhhcCCcEEEEEEeCC--CCeEEEEEEEEEecCC
Q psy2497 51 EANAMFIATSTKNGIPSGRMVLLKSY-G--KNGFVFFTNYNSRKGNELAENPQASLAFYWEP--LKRSVRIEGHVEKTSD 125 (331)
Q Consensus 51 e~~~~~LATvd~dG~P~~R~V~~r~~-~--~~gl~F~T~~~S~K~~eL~~np~val~f~~~~--~~~qvri~G~a~~~~~ 125 (331)
+..+++|||++ +|.|+++||.+... + ++.|||+|. .++|+.+|++||+|++++.... ..+.|.+.|+|+++++
T Consensus 26 ~~~~~~Lat~~-dg~P~v~Pv~f~~~~~~~~~~lyf~ta-~~~K~~~l~~np~V~~~v~~~~~~~~~sV~v~G~a~~v~d 103 (148)
T 3cp3_A 26 SESVGRLVVHR-KDDLDIFPVNFVLDYSAEQPRVYFRTA-EGTKLFSVNLNSDVLFEVDRFDDAEGWSVVLKGNAYVVRD 103 (148)
T ss_dssp TCSEEEEEEEE-TTEEEEEEEEEEEECSSSSCEEEEEEC---CCSSCTTSCSEEEEEEEECC--CEEEEEEEEEEEECCC
T ss_pred cCCEEEEEEEe-CCEEEEEEEEEEEEecCCCCEEEEEcC-CCchHHHHhcCCcEEEEEEECCCCCCeEEEEEEEEEEECC
Confidence 55679999996 89999999999632 1 346999999 9999999999999999997733 3468999999999876
Q ss_pred cc-hhHHHhcCCccccceeecCCCCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCCceEEEEEeceEEEeeecC
Q psy2497 126 KE-SDDYFQSRPYASKIGAIASDQSRPCESRDQMSKITEELRQKYKEGDYVPRPKHWGGYVVIPKVIEFWQGQ 197 (331)
Q Consensus 126 ~~-~~~~~~~~p~~~~~~~~~s~q~~~i~d~~~l~~~~~~~~~~~~~~~~~p~P~~~~~l~v~p~~iEfwq~~ 197 (331)
.+ ..+.|... ...| .| .+..++|+|.|+++......
T Consensus 104 ~~e~~~~l~~~------------------------------~~~~-----~~-~~~~~viri~~~~~tgk~~~ 140 (148)
T 3cp3_A 104 TEEARHADTLG------------------------------LKPW-----LP-TLKYNFVRIDVREVSGRAFV 140 (148)
T ss_dssp HHHHHHHTTSC------------------------------CCCC-----CT-TCCCEEEEEEEEEEEEEEEC
T ss_pred HHHHHHHHhcc------------------------------cccc-----CC-CCceEEEEEEeEEEEEEEcc
Confidence 43 33444220 0011 11 14689999999999877543
No 38
>2fg9_A 5-nitroimidazole antibiotic resistance protein; STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: FAD; 2.20A {Bacteroides thetaiotaomicron} SCOP: b.45.1.1
Probab=99.23 E-value=1.2e-10 Score=101.74 Aligned_cols=83 Identities=20% Similarity=0.231 Sum_probs=68.1
Q ss_pred HHHHHHHHHhhcCCCCCCCceEEEEeecCCCCeeEEEEEEEEeeCCeEEEEecCCCcchhhhhcCCcEEEEEEeCCC---
Q psy2497 34 KLFESWFHEANNTPGIIEANAMFIATSTKNGIPSGRMVLLKSYGKNGFVFFTNYNSRKGNELAENPQASLAFYWEPL--- 110 (331)
Q Consensus 34 ~~f~~Wl~~A~~~~~~~e~~~~~LATvd~dG~P~~R~V~~r~~~~~gl~F~T~~~S~K~~eL~~np~val~f~~~~~--- 110 (331)
+.+.+.|++ ..+++|||+++||.|.+++|.+- ++++.|||+|...++|+++|++||+|+++|..+..
T Consensus 29 ~ei~~~L~~---------~~~~~Lat~~~dg~P~v~Pv~f~-~~~~~lyfhta~~~~k~~~l~~np~V~~~v~~~~~~is 98 (178)
T 2fg9_A 29 QRIESIILQ---------ADACFVGITDLEGNPYVVPMNFG-YENDTLYLHSGPEGGKIEMLQRNNNVCITFSLGHKLVY 98 (178)
T ss_dssp HHHHHHHHH---------CSCEEEEEECTTSCEEEEEECCE-EETTEEEEEECSCSHHHHHHHHCCEEEEEEECCCEEEE
T ss_pred HHHHHHHHh---------CCEEEEEEECCCCcEEEEEEEEE-EECCEEEEEcCCcchHHHHhhcCCcEEEEEEeCCceee
Confidence 444566653 34689999999999999999984 56668999999999999999999999999987653
Q ss_pred ------------CeEEEEEEEEEecCCc
Q psy2497 111 ------------KRSVRIEGHVEKTSDK 126 (331)
Q Consensus 111 ------------~~qvri~G~a~~~~~~ 126 (331)
.+.|.+.|+|+++++.
T Consensus 99 ~~~~~~~~~t~~y~sV~v~G~a~~v~d~ 126 (178)
T 2fg9_A 99 QHKQVACSYSMRSESAMCRGKVEFIEDM 126 (178)
T ss_dssp EC----CEEEEEEEEEEEEEECEEECSH
T ss_pred ccCCCCCCCcccEEEEEEEEEEEEECCH
Confidence 2457899999987653
No 39
>3swj_A CHUZ, putative uncharacterized protein; heme oxygenase, bacterial iron aquisition, heme bindin; HET: HEM; 2.41A {Campylobacter jejuni}
Probab=99.18 E-value=3.2e-10 Score=104.76 Aligned_cols=116 Identities=16% Similarity=0.152 Sum_probs=87.1
Q ss_pred CCceEEEEeecCCCCeeEEEEEEEEeeCCeEEEEecCCCcchhhhhcCC-cEEEEEEeCCC-------CeEEEEEEEEEe
Q psy2497 51 EANAMFIATSTKNGIPSGRMVLLKSYGKNGFVFFTNYNSRKGNELAENP-QASLAFYWEPL-------KRSVRIEGHVEK 122 (331)
Q Consensus 51 e~~~~~LATvd~dG~P~~R~V~~r~~~~~gl~F~T~~~S~K~~eL~~np-~val~f~~~~~-------~~qvri~G~a~~ 122 (331)
..+.++|||+++||.|.+.+|.+.. +++.+||+++.-+.|.++|++|| +|+|++..++. .+-|+|.|+|++
T Consensus 97 ~~~~~~LAT~~~dG~P~~s~v~~~~-~~g~~~~~~s~~a~h~~NL~~nP~rvSl~v~e~e~~~~~~~~~~rltl~G~a~~ 175 (251)
T 3swj_A 97 SFNSVALATLNANGEVVCSYAPFVS-TQWGNYIYISEVSEHFNNIKVNPNNIEIMFLEDESKAASVILRKRLRYRVNASF 175 (251)
T ss_dssp TCSEEEEEEECTTSCEEEEEEEEEE-ETTEEEEEEETTSHHHHHHHHSTTCEEEEEECCTTTSSCTTCCCEEEEEEEEEE
T ss_pred hCCEEEEEEECCCCCEEEEEEEEEE-ECCEEEEEEeCchHHHHHHHhCCCeEEEEEEcCcccccCccccceEEEEEEEEE
Confidence 5678999999999999999999864 45679999999999999999999 99999986542 467999999999
Q ss_pred cCCcchhHHHhcCCccccceeecCCCCCCCCCHHHHHHHHHHHHHhhcCC---CCCCCCCceEEEEEeceEEEeeec
Q psy2497 123 TSDKESDDYFQSRPYASKIGAIASDQSRPCESRDQMSKITEELRQKYKEG---DYVPRPKHWGGYVVIPKVIEFWQG 196 (331)
Q Consensus 123 ~~~~~~~~~~~~~p~~~~~~~~~s~q~~~i~d~~~l~~~~~~~~~~~~~~---~~~p~P~~~~~l~v~p~~iEfwq~ 196 (331)
+++++ +..+..+.+..+|++. +....-+.|.+|+|+|..+-|..+
T Consensus 176 v~~~~-----------------------------e~~~~~~~~~~k~p~a~~~~~~~~~~Df~l~rl~p~~~r~v~G 223 (251)
T 3swj_A 176 LERGE-----------------------------RFDQIYDEFEKQTGGEGGIKTIRKMLDFHLVKLEFKKGRFVKG 223 (251)
T ss_dssp CCSSH-----------------------------HHHHHHHHHHHHHCSTTTHHHHHTCTTEEEEEEEEEEEEEEEE
T ss_pred ecChh-----------------------------HHHHHHHHHHHHCCCchhhhhcCcccCEEEEEEEeeEEEEECC
Confidence 87531 1112223334444431 001223569999999999988854
No 40
>2hti_A BH0577 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, FMN-binding protein; HET: FAD; 2.50A {Bacillus halodurans} SCOP: b.45.1.1
Probab=99.16 E-value=5.6e-10 Score=97.80 Aligned_cols=82 Identities=22% Similarity=0.238 Sum_probs=67.1
Q ss_pred HHHHHHHHHhhcCCCCCCCceEEEEeecCCCCeeEEEEEEEEeeCCeEEEEecCCCcchhhhhcCCcEEEEEEeC----C
Q psy2497 34 KLFESWFHEANNTPGIIEANAMFIATSTKNGIPSGRMVLLKSYGKNGFVFFTNYNSRKGNELAENPQASLAFYWE----P 109 (331)
Q Consensus 34 ~~f~~Wl~~A~~~~~~~e~~~~~LATvd~dG~P~~R~V~~r~~~~~gl~F~T~~~S~K~~eL~~np~val~f~~~----~ 109 (331)
+.+...|+ +..+++|||++ +|.|++.||.+. ++++.|||+|...++|+++|++||+|++++..+ .
T Consensus 16 e~i~~~L~---------~~~~~~Lat~~-~g~P~~~Pv~f~-~~~~~ly~hta~~~~k~~~l~~np~V~~~v~~~~~~~~ 84 (185)
T 2hti_A 16 KKITEFLN---------KARTGFLGLST-NDQPYVIPLNFV-WHNHAIYFHGASEGRKIKMIEANPEVCFTICEDLGTIV 84 (185)
T ss_dssp HHHHHHHH---------HCCCEEEEEEE-TTEEEEEEECCE-EETTEEEEEEESSSHHHHHHHHCCEEEEEEEECC----
T ss_pred HHHHHHHh---------cCCEEEEEEee-CCEEEEEEEEEE-EECCEEEEEeCCcCHHHHHhhcCCeEEEEEEecccccc
Confidence 44556665 34569999999 689999999985 566679999999999999999999999999987 4
Q ss_pred -------C--CeEEEEEEEEEecCCc
Q psy2497 110 -------L--KRSVRIEGHVEKTSDK 126 (331)
Q Consensus 110 -------~--~~qvri~G~a~~~~~~ 126 (331)
. .+.|.+.|+|+++++.
T Consensus 85 ~~v~~~~t~~y~sV~v~G~a~~v~d~ 110 (185)
T 2hti_A 85 SPVPAHTDTAYMSVIIFGTIEPVSAI 110 (185)
T ss_dssp ---------CEEEEEEEEEEEECCCH
T ss_pred ccccccCcceEEEEEEEEEEEEECCH
Confidence 1 2559999999998764
No 41
>1xhn_A CREG, cellular repressor of E1A-stimulated genes; beta-barrel, unknown function; HET: MSE; 1.95A {Homo sapiens} SCOP: b.45.1.1
Probab=99.02 E-value=2.8e-09 Score=93.51 Aligned_cols=117 Identities=19% Similarity=0.113 Sum_probs=83.5
Q ss_pred CCceEEEEeecC----CCCeeEEEEEEEE--e-eC-CeEEEEecCCCcchhhhhcCCcEEEEEEeC------------CC
Q psy2497 51 EANAMFIATSTK----NGIPSGRMVLLKS--Y-GK-NGFVFFTNYNSRKGNELAENPQASLAFYWE------------PL 110 (331)
Q Consensus 51 e~~~~~LATvd~----dG~P~~R~V~~r~--~-~~-~gl~F~T~~~S~K~~eL~~np~val~f~~~------------~~ 110 (331)
..+.++|||+++ +|.|.+-+|.+-. . ++ +.+||++...+.|+++|++||+|+|++.+. ..
T Consensus 29 ~~~~g~LaTi~~~~~~dG~P~~s~v~~~~~~~~d~~g~~~f~~s~~~~~~~nl~~nprvSl~v~~~~~~~~~~~~~dp~~ 108 (184)
T 1xhn_A 29 VSDWGALATISTLEAVRGRPFADVLSLSDGPPGAGSGVPYFYLSPLQLSVSNLQENPYATLTMTLAQTNFCKKHGFDPQS 108 (184)
T ss_dssp HCSEEEEEEECCCGGGTTCEEEEEEECBSCSTTCCCSCCEEEECTTSHHHHHHHHCCEEEEEEEGGGTTHHHHHTCCTTS
T ss_pred hCCEEEEEecccCCCCCCcceEEEEEEEeccCcCCCCCEEEEEeCccHhHHHHhhCCCEEEEEecCCCccccccCCCCcc
Confidence 345799999998 9999999998742 0 33 359999999999999999999999999853 23
Q ss_pred --CeEEEEEEEEEecCCcchhHHHhcCCccccceeecCCCCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCCceEEEEEec
Q psy2497 111 --KRSVRIEGHVEKTSDKESDDYFQSRPYASKIGAIASDQSRPCESRDQMSKITEELRQKYKEGDYVPRPKHWGGYVVIP 188 (331)
Q Consensus 111 --~~qvri~G~a~~~~~~~~~~~~~~~p~~~~~~~~~s~q~~~i~d~~~l~~~~~~~~~~~~~~~~~p~P~~~~~l~v~p 188 (331)
..-|+|.|+|+.+++++.+. ..+.+...+++........+|.+++|.|
T Consensus 109 ~~~~rvtl~G~a~~v~d~e~~~------------------------------~~~~~~~~hP~~~~~~~~~~~~~~~l~i 158 (184)
T 1xhn_A 109 PLCVHIMLSGTVTKVNETEMDI------------------------------AKHSLFIRHPEMKTWPSSHNWFFAKLNI 158 (184)
T ss_dssp TTSCEEEEEEEEEECCGGGHHH------------------------------HHHHHHHHCGGGGGSCGGGCCEEEEEEE
T ss_pred ccCceEEEEEEEEECChHHHHH------------------------------HHHHHHHHCcChhHcccCCCEEEEEEEE
Confidence 56799999999987542111 1112222333211112235799999999
Q ss_pred eEEEeeecC
Q psy2497 189 KVIEFWQGQ 197 (331)
Q Consensus 189 ~~iEfwq~~ 197 (331)
+++-|..+-
T Consensus 159 ~~i~~v~gF 167 (184)
T 1xhn_A 159 TNIWVLDYF 167 (184)
T ss_dssp EEEEEECSS
T ss_pred eEEEEEccC
Confidence 999877643
No 42
>2fur_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.80A {Thermoplasma acidophilum} SCOP: b.45.1.1
Probab=99.00 E-value=2.5e-09 Score=95.71 Aligned_cols=82 Identities=13% Similarity=0.052 Sum_probs=67.2
Q ss_pred HHHHHHHHHhhcCCCCCCCceEEEEeecCCCCeeEEEEEEEEeeCCeEEEEecCCCcchhhhhcCCcEEEEEEeCCC---
Q psy2497 34 KLFESWFHEANNTPGIIEANAMFIATSTKNGIPSGRMVLLKSYGKNGFVFFTNYNSRKGNELAENPQASLAFYWEPL--- 110 (331)
Q Consensus 34 ~~f~~Wl~~A~~~~~~~e~~~~~LATvd~dG~P~~R~V~~r~~~~~gl~F~T~~~S~K~~eL~~np~val~f~~~~~--- 110 (331)
+.+.+.|+ +..+++|||++ +|.|++++|.+. ++++.|||+|...++|+++|++||+|+++|..+..
T Consensus 23 ~ei~~~L~---------~~~~~~Lat~~-dg~P~v~Pv~f~-~~~~~lyfhta~~~~k~~~l~~np~V~~~v~~~~~~v~ 91 (209)
T 2fur_A 23 EDLVAMLD---------RNFTCTVSFID-GGIPYAIPMMLA-SEGKTIYLHGSMKSRIYGILKTGQLIAISLLEINGIVL 91 (209)
T ss_dssp HHHHHHHH---------HCSEEEEEEEE-TTEEEEEEEECE-EETTEEEEEEETTSHHHHHHHTTCCEEEEEEEEEEEEE
T ss_pred HHHHHHHH---------hCCEEEEEEcc-CCEEEEEEEEEE-EECCEEEEEeCCcCHHHHHhhcCCeEEEEEEcCCeeec
Confidence 44456664 34579999999 899999999986 45567999999999999999999999999986542
Q ss_pred ----------CeEEEEEEEEEecCCc
Q psy2497 111 ----------KRSVRIEGHVEKTSDK 126 (331)
Q Consensus 111 ----------~~qvri~G~a~~~~~~ 126 (331)
.+.|.+.|+|+++.+.
T Consensus 92 ~~~~~~~t~~y~sV~v~G~a~~v~d~ 117 (209)
T 2fur_A 92 AKEIKNNSINYVSALIFGRPYEIDDT 117 (209)
T ss_dssp CSBGGGCEEEEEEEEEEECCEECCCH
T ss_pred CCCCCCCccEEEEEEEEEEEEEECCH
Confidence 2568999999987653
No 43
>3u5w_A Putative uncharacterized protein; ssgcid, seattle structural genomics center for infectious DI FMN-binding protein; 2.05A {Brucella melitensis biovar abortus} SCOP: b.45.1.0 PDB: 3u0i_A
Probab=99.00 E-value=4.1e-09 Score=89.38 Aligned_cols=73 Identities=16% Similarity=0.244 Sum_probs=61.4
Q ss_pred CCceEEEEeecCCCCeeEEEEEEEEeeCCeEEEEecCCCcchhhhhcCCcEEEEEEeCCC--C-eEEEEEEEEEecCCc
Q psy2497 51 EANAMFIATSTKNGIPSGRMVLLKSYGKNGFVFFTNYNSRKGNELAENPQASLAFYWEPL--K-RSVRIEGHVEKTSDK 126 (331)
Q Consensus 51 e~~~~~LATvd~dG~P~~R~V~~r~~~~~gl~F~T~~~S~K~~eL~~np~val~f~~~~~--~-~qvri~G~a~~~~~~ 126 (331)
+..++.|||++ ||.|++.||.+. ++++.|||+|. .++|+.+|++||+|++++..... . +.|.+.|+|+++++.
T Consensus 21 ~~~~~~Lat~~-dg~P~~~Pv~~~-~~~~~ly~~~~-~g~K~~~l~~np~V~~~v~~~~~~~~y~sV~v~G~a~~v~d~ 96 (148)
T 3u5w_A 21 HKHVGRLGYVV-DDRPIIVPMTFR-FSGGSFYSFTT-DGQKTNAMRKNDAICILFDQIESQTKWRTVLVQGRYREIARE 96 (148)
T ss_dssp HCCEEEEEEEE-TTEEEEEEEECE-EETTEEEEEEC-CHHHHHHHHHCCEEEEEEEEESSSSSEEEEEEEEEEEECCGG
T ss_pred cCCEEEEEEcc-CCcEEEEEEEEE-EECCEEEEEEC-CchhHHHHhcCCcEEEEEEecCCCCcEEEEEEEEEEEEeCCH
Confidence 34579999996 899999999985 56668999995 68999999999999999986442 2 359999999999874
No 44
>2hq9_A MLL6688 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, flavoprotein; HET: FAD; 1.95A {Mesorhizobium loti} SCOP: b.45.1.1
Probab=99.00 E-value=1.4e-09 Score=91.63 Aligned_cols=74 Identities=19% Similarity=0.214 Sum_probs=62.6
Q ss_pred CCceEEEEeecCCCCeeEEEEEEEEeeCCeEEEEecCCCcchhhhhcCCcEEEEEEeCCC--C-eEEEEEEEEEecCCcc
Q psy2497 51 EANAMFIATSTKNGIPSGRMVLLKSYGKNGFVFFTNYNSRKGNELAENPQASLAFYWEPL--K-RSVRIEGHVEKTSDKE 127 (331)
Q Consensus 51 e~~~~~LATvd~dG~P~~R~V~~r~~~~~gl~F~T~~~S~K~~eL~~np~val~f~~~~~--~-~qvri~G~a~~~~~~~ 127 (331)
+..+++|||++ ||.|+++||.+. ++++.|||+| ..++|+++|++||+|++++..... . +.|.+.|+|+++++.+
T Consensus 18 ~~~~~~Lat~~-~g~P~~~pv~~~-~~~~~l~~~t-~~~~k~~~l~~~p~V~~~v~~~~~~~~y~sV~v~G~a~~v~d~~ 94 (149)
T 2hq9_A 18 ANRVGRLACAK-DGQPYVVPLYYA-YSDAHLYAFS-MPGKKIEWMRANPRVSVQVDEHGQGRGWKSVVVDGRYEELPDLI 94 (149)
T ss_dssp HCCEEEEEEEE-TTEEEEEEEECE-EETTEEEEEE-CSSHHHHHHHHCCEEEEEEEEECSTTCEEEEEEEEEEEECCSCG
T ss_pred hCCEEEEEEcc-CCeEEEEEEEEE-EECCEEEEEe-CccHHHHHHhcCCcEEEEEEecCCCCcEEEEEEEEEEEEEcCcc
Confidence 45679999999 999999999994 5666799998 689999999999999999987543 2 3499999999988753
No 45
>3gas_A Heme oxygenase; FMN-binding split barrel, oxidoreductase; HET: HEM; 1.80A {Helicobacter pylori}
Probab=98.96 E-value=6e-09 Score=96.61 Aligned_cols=117 Identities=13% Similarity=0.123 Sum_probs=86.7
Q ss_pred CCceEEEEeecCCCCeeEEEEEEEEeeCCeEEEEecCCCcchhhhhcCC-cEEEEEEeCCC-------CeEEEEEEEEEe
Q psy2497 51 EANAMFIATSTKNGIPSGRMVLLKSYGKNGFVFFTNYNSRKGNELAENP-QASLAFYWEPL-------KRSVRIEGHVEK 122 (331)
Q Consensus 51 e~~~~~LATvd~dG~P~~R~V~~r~~~~~gl~F~T~~~S~K~~eL~~np-~val~f~~~~~-------~~qvri~G~a~~ 122 (331)
+.+.++|||++++|.|.+-+|.+- .+++++||+++.-++|.++|++|| +|+|++..++. .+-|++.|+|+.
T Consensus 97 ~~~~~~LAT~~~~G~P~~S~v~f~-~~~g~~~iliS~lA~Ht~NL~~np~rvSllviede~~~~~~~a~~Rlt~~g~A~~ 175 (259)
T 3gas_A 97 GFDSVCLATLHPNGHVVCSYAPLM-SDGKQYYIYVSEVAEHFAGLKNNPHNVEVMFLEDESKAKSAILRKRLRYKTNTRF 175 (259)
T ss_dssp TCSEEEEEEECTTSCEEEEEEEEE-EETTEEEEEEETTSHHHHHHHHSTTSEEEEEECCTTTSSBTTBCCEEEEEEEEEE
T ss_pred hCCEEEEEeeCcCCCEEEEEEEEE-EECCEEEEEEeCchHHHHHHHhCCCeEEEEEEeCccccCChhhcCeEEEEEEEEE
Confidence 578899999999999999999986 455689999999999999999999 99999976542 367899999999
Q ss_pred cCCcchhHHHhcCCccccceeecCCCCCCCCCHHHHHHHHHHHHHhhcCC---CCCCCCCceEEEEEeceEEEeeecC
Q psy2497 123 TSDKESDDYFQSRPYASKIGAIASDQSRPCESRDQMSKITEELRQKYKEG---DYVPRPKHWGGYVVIPKVIEFWQGQ 197 (331)
Q Consensus 123 ~~~~~~~~~~~~~p~~~~~~~~~s~q~~~i~d~~~l~~~~~~~~~~~~~~---~~~p~P~~~~~l~v~p~~iEfwq~~ 197 (331)
+.+++ ...+..+.+..+|+.. +..-.=+.|.+|+|+|.++-|-.|-
T Consensus 176 v~~~~-----------------------------~~~~~~~~~~~r~p~~~~~~~~~~~~DF~l~rl~p~~~r~v~GF 224 (259)
T 3gas_A 176 IERGA-----------------------------EFDKAFDSFIEKTGGAGGIKTIRAMQDFHLIALDFKEGRFVKGF 224 (259)
T ss_dssp ECSSH-----------------------------HHHHHHHHHHHHHCSTTTHHHHHTCTTEEEEEEEEEEEEEEEET
T ss_pred CCCch-----------------------------HHHHHHHHHHHHcCCchhhHhcccCCCeEEEEEEEeEEEEEccc
Confidence 87631 1111222333444320 0001114699999999999988553
No 46
>2vpa_A NIMA-related protein; cofactor, atomic resolution, antibiotic resistance, oxidoreductase; 1.2A {Deinococcus radiodurans} SCOP: b.45.1.1 PDB: 1w3p_A 1w3q_A 1w3r_A* 1w3o_A 2x1k_A 2x1j_A
Probab=98.93 E-value=5.7e-09 Score=94.13 Aligned_cols=80 Identities=18% Similarity=0.111 Sum_probs=66.4
Q ss_pred HHHHHHHHHhhcCCCCCCCceEEEEeec----CCCCeeEEEEEEEEeeCCe--EEEEecCCCcchhhhhcCCcEEEEEEe
Q psy2497 34 KLFESWFHEANNTPGIIEANAMFIATST----KNGIPSGRMVLLKSYGKNG--FVFFTNYNSRKGNELAENPQASLAFYW 107 (331)
Q Consensus 34 ~~f~~Wl~~A~~~~~~~e~~~~~LATvd----~dG~P~~R~V~~r~~~~~g--l~F~T~~~S~K~~eL~~np~val~f~~ 107 (331)
+.+.+.|+ +..+++|||++ ++|.|.+++|.+. ++++. |||+|...++|+++|++||+|+++|..
T Consensus 46 ~ei~~~L~---------~~~~~~Lat~~~~~~~dg~P~v~Pv~f~-~d~~~~~Lyfhta~~~~K~~~l~~np~V~~~v~~ 115 (216)
T 2vpa_A 46 EWIRELLL---------RGTIARVATLWQGEDGAAFPFITPLAYA-YRPEQGDLVYHTNVVGRLRANAGQGHPATLEVSE 115 (216)
T ss_dssp HHHHHHHH---------HCCEEEEEEEEECTTSCEEEEEEEEECE-EETTTTEEEEECCCCCSSBSSCSSEEEEEEEEEE
T ss_pred HHHHHHHH---------hCCEEEEEEccCCCCCCCceEEEEEEEE-EECCeeEEEEEecCcCHHHHHhccCCcEEEEEEe
Confidence 44456664 34579999999 7999999999996 45555 999999999999999999999999986
Q ss_pred CCC-------------CeEEEEEEEEEec
Q psy2497 108 EPL-------------KRSVRIEGHVEKT 123 (331)
Q Consensus 108 ~~~-------------~~qvri~G~a~~~ 123 (331)
+.. -+.|.|.|+|+++
T Consensus 116 ~~~~v~~~~~~~~t~~y~sV~v~G~a~~v 144 (216)
T 2vpa_A 116 IGQFLPSNSPLELSVQYRSVMVFGTARVL 144 (216)
T ss_dssp EEEEECCSSGGGCEEEEEEEEEEEEEEEC
T ss_pred CCeeccCccCCCCcccEEEEEEEEEEEEE
Confidence 542 2669999999987
No 47
>3dnh_A Uncharacterized protein ATU2129; APC6114, agrobacterium tumefaciens STR. C58 structural genomics, PSI-2, protein structure initiative; 1.94A {Agrobacterium tumefaciens}
Probab=98.91 E-value=1.4e-08 Score=93.99 Aligned_cols=115 Identities=10% Similarity=0.083 Sum_probs=83.9
Q ss_pred CCceEEEEeec-CCCCeeEEEEEEEEeeCC-eEEEEecCCCcchhhhhcCCcEEEEEEeCCC-----CeEEEEEEEEEec
Q psy2497 51 EANAMFIATST-KNGIPSGRMVLLKSYGKN-GFVFFTNYNSRKGNELAENPQASLAFYWEPL-----KRSVRIEGHVEKT 123 (331)
Q Consensus 51 e~~~~~LATvd-~dG~P~~R~V~~r~~~~~-gl~F~T~~~S~K~~eL~~np~val~f~~~~~-----~~qvri~G~a~~~ 123 (331)
..+.++|||++ .||.|.+-+|.+- ++.+ .++|++...+.|.++|++||+|+|++..+.. ...|.|.|+++.+
T Consensus 38 ~~~~g~LaTv~~~dG~P~~s~v~y~-~d~~g~~~~~~s~~~~h~~NL~~dprvSl~V~~~~~~d~~~~~rvtl~G~a~~v 116 (258)
T 3dnh_A 38 TSRTAALATLDPVSGYPYTTATNIG-IEPDGTPFFFAAGLTLHARNMETDARISVTLAPFGKGDALTLPRLTLVGRADRI 116 (258)
T ss_dssp HCCEEEEEEECTTTCCEEEEEEECE-ECTTSCEEEEEETTSHHHHHHHHCCEEEEEECCGGGSCGGGSCEEEEEEEEEEC
T ss_pred hCCEEEEEeccCCCCceEEEEEEEE-ECCCCCEEEEEeCCcHHHHHHhhCCCEEEEEecCCCCChhhCCeEEEEEEEEEc
Confidence 45679999999 9999999999986 5644 4899999999999999999999999997652 3679999999998
Q ss_pred CCcchhHHHhcCCccccceeecCCCCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCCceEEEEEeceEEEeeec
Q psy2497 124 SDKESDDYFQSRPYASKIGAIASDQSRPCESRDQMSKITEELRQKYKEGDYVPRPKHWGGYVVIPKVIEFWQG 196 (331)
Q Consensus 124 ~~~~~~~~~~~~p~~~~~~~~~s~q~~~i~d~~~l~~~~~~~~~~~~~~~~~p~P~~~~~l~v~p~~iEfwq~ 196 (331)
.+++.+. ..+.+...+++......-++|.+|+|.|+++-|-.+
T Consensus 117 ~~~e~~~------------------------------l~~~y~~rhP~a~~~~~~~df~l~rl~~~~v~~v~G 159 (258)
T 3dnh_A 117 GPDEVPL------------------------------AIARYIARYPKAKLYLSLPDTRLYRLRTEGVQINGG 159 (258)
T ss_dssp CGGGHHH------------------------------HHHHHHHHCTTHHHHTSSTTEEEEEEEEEEEEEEC-
T ss_pred CchHHHH------------------------------HHHHHHHHCcChHHcccCCCeEEEEEEEeEEEEEcc
Confidence 7653211 111222223221001112569999999999998854
No 48
>3fkh_A Putative pyridoxamine 5'-phosphate oxidase; NP_601736.1, STR genomics, joint center for structural genomics, JCSG; HET: P33; 2.51A {Corynebacterium glutamicum atcc 13032}
Probab=98.88 E-value=1.6e-08 Score=85.15 Aligned_cols=73 Identities=11% Similarity=-0.120 Sum_probs=54.6
Q ss_pred CCceEEEEeecCCCCeeEEEEEEEEeeCCeEEEEecCCCcchhhhhcCCcEEEEEEeC--CCCeEEEEEEEEEecCCc
Q psy2497 51 EANAMFIATSTKNGIPSGRMVLLKSYGKNGFVFFTNYNSRKGNELAENPQASLAFYWE--PLKRSVRIEGHVEKTSDK 126 (331)
Q Consensus 51 e~~~~~LATvd~dG~P~~R~V~~r~~~~~gl~F~T~~~S~K~~eL~~np~val~f~~~--~~~~qvri~G~a~~~~~~ 126 (331)
...++.|||++ ||.|++-||.+- ++++.|||+|.. ..|...|++||+||++.... .....|.+.|+|+.+++.
T Consensus 20 ~~~~g~La~~~-dg~P~vvPv~f~-~~~~~iyfh~a~-g~K~~~i~~~~~V~f~vd~~~~~~~~SV~v~G~a~~v~d~ 94 (138)
T 3fkh_A 20 SVSLGRVVVRR-SDEMDIFPVNFI-VDKGAIYIRTAE-GNKLFSMNLNHDVLFEADEVKDGKAWSVVVRATAEIVRKL 94 (138)
T ss_dssp TCSEEEEEEEE-TTEEEEEEEEEE-EETTEEEEEEEC---------CCSEEEEEEEEEETTEEEEEEEEEEEEECCSH
T ss_pred cCCEEEEEEee-CCEEEEEEEEEE-EECCEEEEEeCC-ChHHHHhhcCCCEEEEEEECCCCCCEEEEEEEEEEEECCH
Confidence 56789999998 999999999985 566789999998 45999999999999999853 234579999999997753
No 49
>2ig6_A NIMC/NIMA family protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: FMN; 1.80A {Clostridium acetobutylicum}
Probab=98.87 E-value=2.1e-09 Score=91.40 Aligned_cols=79 Identities=14% Similarity=0.101 Sum_probs=65.9
Q ss_pred CCCccceEEEeccCCCCCCCCCCCcCCCCceEeeecCCCccccccchhHhhCCceEEEeecCCCCceEEEEEEeeEcCHH
Q psy2497 198 SDRVHDRIVFKRPVPGEPLGPHSHEGEDGWYYERLFPQPKQGIQYLHLKAENPQASLAFYWEPLKRSVRIEGHVEKTSDK 277 (331)
Q Consensus 198 ~~r~h~R~~f~k~~~~~~~~~~~~~~~~gw~f~tl~pS~K~~~~~~~~l~~np~aal~f~W~~l~RQVri~G~v~~~~~~ 277 (331)
.|.|+.|.+... ..+++++.|.|+..|+|. ++|+.||+||++|+|+. .+||+|+|+|+.+++.
T Consensus 40 dG~P~~rpv~~~-----------~~~~~~l~f~t~~~s~K~-----~~l~~np~V~l~~~~~~-~~~v~i~G~a~~v~d~ 102 (150)
T 2ig6_A 40 GDQPRVRPFGAV-----------FEYEGKLYIVSNNTKKCF-----KQMIQNPKVEISGMNKK-GQWIRLTGEVANDDRR 102 (150)
T ss_dssp TTEEEEEEECCC-----------EEETTEEEEEEETTSHHH-----HHHHHCCEEEEEEECTT-SCEEEEEEEEEECCCH
T ss_pred CCceEEEEeEEE-----------EEcCCEEEEEeCCCcHHH-----HHHHHCCCEEEEEEcCC-CeEEEEEEEEEEECCH
Confidence 356777876553 124578999999999996 37999999999999999 8999999999999886
Q ss_pred -HHHHHHhcCCCCcccc
Q psy2497 278 -ESDDYFQSRPYASKIG 293 (331)
Q Consensus 278 -es~~yf~~Rp~~sqi~ 293 (331)
+.+++|..+|..+++.
T Consensus 103 e~~~~~~~~~p~~~~~~ 119 (150)
T 2ig6_A 103 EVKELALEAVPSLKNMY 119 (150)
T ss_dssp HHHHHHHHHSGGGGGTC
T ss_pred HHHHHHHHhChHHHHhh
Confidence 4789999999877665
No 50
>2qea_A Putative general stress protein 26; structural genomics, JOI for structural genomics, JCSG, protein structure initiative oxidoreductase; 2.46A {Jannaschia SP}
Probab=98.76 E-value=7.9e-09 Score=88.51 Aligned_cols=62 Identities=10% Similarity=0.053 Sum_probs=52.4
Q ss_pred CCCccceEEEeccCCCCCCCCCCCcCCCC--ceEeeecCCCccccccchhHhhCCc-eEEEeecCCCCceEEEEEEeeEc
Q psy2497 198 SDRVHDRIVFKRPVPGEPLGPHSHEGEDG--WYYERLFPQPKQGIQYLHLKAENPQ-ASLAFYWEPLKRSVRIEGHVEKT 274 (331)
Q Consensus 198 ~~r~h~R~~f~k~~~~~~~~~~~~~~~~g--w~f~tl~pS~K~~~~~~~~l~~np~-aal~f~W~~l~RQVri~G~v~~~ 274 (331)
.+.||.|.+... ..+++| +.|+|+..|+|. ++|+.||+ |||+|+|+...|||+|+|+|+.+
T Consensus 24 dG~P~~rpv~~~-----------~~~~~g~~l~f~t~~~s~K~-----~~l~~np~~v~l~~~~~~~~~~v~v~G~a~~v 87 (160)
T 2qea_A 24 KGQGRLIPMSPQ-----------TDDDAPGAIWFITAKGTDLA-----KGVAAGPQPAQFVVSDDGEGLYADLDGTLERS 87 (160)
T ss_dssp TTSSCCEEECCB-----------CCTTSCSCEEEEEETTSHHH-----HHTSSSCEEEEEEEEETTTTEEEEEEEEEEEE
T ss_pred CCCeeEEEeeee-----------EecCCCCEEEEEECCCCHHH-----HHHHhCCceEEEEEECCCCCeEEEEEEEEEEE
Confidence 467999998775 233455 999999999996 37999999 99999999999999999999765
Q ss_pred C
Q psy2497 275 S 275 (331)
Q Consensus 275 ~ 275 (331)
+
T Consensus 88 ~ 88 (160)
T 2qea_A 88 T 88 (160)
T ss_dssp C
T ss_pred c
Confidence 3
No 51
>3dmb_A Putative general stress protein 26 with A PNP-OXI fold; PNP-oxidase like fold, structural genomics; HET: MSE; 2.30A {Xanthomonas campestris PV}
Probab=98.71 E-value=3.1e-08 Score=83.69 Aligned_cols=55 Identities=13% Similarity=0.135 Sum_probs=47.6
Q ss_pred CCC-ceEeeecCCCccccccchhHhhCCceEEEeecCCCCceEEEEEEeeEcCHHH-HHHHH
Q psy2497 224 EDG-WYYERLFPQPKQGIQYLHLKAENPQASLAFYWEPLKRSVRIEGHVEKTSDKE-SDDYF 283 (331)
Q Consensus 224 ~~g-w~f~tl~pS~K~~~~~~~~l~~np~aal~f~W~~l~RQVri~G~v~~~~~~e-s~~yf 283 (331)
++| +.|+|+..|+|. ++|+.||+|||+|+|+...|||+|+|+|+.+++.+ .+++|
T Consensus 45 ~~g~l~F~T~~~s~K~-----~~l~~np~v~l~~~~~~~~~~v~v~G~a~~~~d~~~~~~~~ 101 (147)
T 3dmb_A 45 SGGPIWFFTSKDNALI-----AMLGQGRRVIGAFSSKGHDLFASISGSLREDTDPAVVDRLW 101 (147)
T ss_dssp SCCCEEEEECTTCTTH-----HHHTTCEEEEEEEECTTSSEEEEEEEEEEECCCHHHHHHHC
T ss_pred CCceEEEEecCCcHHH-----HHHhhCCeEEEEEEcCCCCeEEEEEEEEEEecCHHHHHHHh
Confidence 345 999999999996 37999999999999999999999999999997654 55555
No 52
>2hhz_A Pyridoxamine 5'-phosphate oxidase-related; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.00A {Streptococcus suis}
Probab=98.63 E-value=5.9e-08 Score=81.66 Aligned_cols=78 Identities=15% Similarity=0.186 Sum_probs=64.8
Q ss_pred CCCccceEEEeccCCCCCCCCCCCcCCCCceEeeecCCCccccccchhHhhCCceEEEeecCCC--CceEEEEEEeeEcC
Q psy2497 198 SDRVHDRIVFKRPVPGEPLGPHSHEGEDGWYYERLFPQPKQGIQYLHLKAENPQASLAFYWEPL--KRSVRIEGHVEKTS 275 (331)
Q Consensus 198 ~~r~h~R~~f~k~~~~~~~~~~~~~~~~gw~f~tl~pS~K~~~~~~~~l~~np~aal~f~W~~l--~RQVri~G~v~~~~ 275 (331)
.+.|+.|..... ..+++++.|.|...|+|. ++|..||+||++|+++.. .+||+|+|+|+.++
T Consensus 25 dG~P~~~p~~~~-----------~~~~~~l~f~t~~~s~k~-----~~l~~np~V~l~~~~~~~~~~~~v~i~G~a~~v~ 88 (150)
T 2hhz_A 25 YGNPHARHAHIT-----------AANEEGIFFMTSPETHFY-----DQLMGDQRVAMTAISEEGYLIQVVRVEGTARPVE 88 (150)
T ss_dssp TCCEEEEEEEEE-----------EEETTEEEEEECTTSHHH-----HHHHHCCEEEEEEEECSTTCCEEEEEEEEEEEEC
T ss_pred CCCEEEEEEEEE-----------EEcCCEEEEEecCCCHHH-----HHHhhCCeEEEEEEcCCcceeEEEEEEEEEEECC
Confidence 467888887764 123567999999999996 379999999999999875 49999999999999
Q ss_pred HHHHHHHHhcCCCCcc
Q psy2497 276 DKESDDYFQSRPYASK 291 (331)
Q Consensus 276 ~~es~~yf~~Rp~~sq 291 (331)
+.+..++|..+|...+
T Consensus 89 d~~~~~~~~~~p~~~~ 104 (150)
T 2hhz_A 89 NDYLKTVFADNPYYQH 104 (150)
T ss_dssp HHHHHHHHTTCGGGGG
T ss_pred cHHHHHHHHhChhhhh
Confidence 9999999988776443
No 53
>3u35_A General stress protein; PNP-oxidase like fold, FMN/FAD, protein BI; HET: PGE; 2.50A {Xanthomonas axonopodis PV} PDB: 3u34_A*
Probab=98.43 E-value=3.1e-07 Score=80.71 Aligned_cols=55 Identities=13% Similarity=0.135 Sum_probs=48.4
Q ss_pred CCC-ceEeeecCCCccccccchhHhhCCceEEEeecCCCCceEEEEEEeeEcCHHH-HHHHH
Q psy2497 224 EDG-WYYERLFPQPKQGIQYLHLKAENPQASLAFYWEPLKRSVRIEGHVEKTSDKE-SDDYF 283 (331)
Q Consensus 224 ~~g-w~f~tl~pS~K~~~~~~~~l~~np~aal~f~W~~l~RQVri~G~v~~~~~~e-s~~yf 283 (331)
++| +.|+|+..|+|. + +|+.||+|+|+|+|+...++|+|+|+|+.+++.+ .+++|
T Consensus 64 ~~g~l~F~T~~~s~K~-~----~l~~np~v~l~~~~~~~~~~V~v~G~a~vv~D~e~~~~lw 120 (182)
T 3u35_A 64 SGGPIWFFTSKDNALI-A----MLGQGRRVIGAFSSKGHDLFASISGSLREDTDPAMVDRLW 120 (182)
T ss_dssp SCSCEEEEEETTCGGG-G----GCTTCEEEEEEEECTTSSEEEEEEEEEEECCCHHHHHHHC
T ss_pred CCCEEEEEECCCCHHH-H----HHHHCCcEEEEEECCCCCeEEEEEEEEEEEcCHHHHHHHH
Confidence 345 999999999996 3 6999999999999999999999999999998765 56665
No 54
>2iab_A Hypothetical protein; NP_828636.1, structural genomics, JOIN for structural genomics, JCSG; 2.00A {Streptomyces avermitilis}
Probab=98.38 E-value=2.8e-07 Score=78.31 Aligned_cols=61 Identities=10% Similarity=-0.062 Sum_probs=53.1
Q ss_pred CCccceEEEeccCCCCCCCCCCCcCCCCceEeeecCCCccccccchhHhhCCceEEEeecCCCCceEEEEEEeeEcCHHH
Q psy2497 199 DRVHDRIVFKRPVPGEPLGPHSHEGEDGWYYERLFPQPKQGIQYLHLKAENPQASLAFYWEPLKRSVRIEGHVEKTSDKE 278 (331)
Q Consensus 199 ~r~h~R~~f~k~~~~~~~~~~~~~~~~gw~f~tl~pS~K~~~~~~~~l~~np~aal~f~W~~l~RQVri~G~v~~~~~~e 278 (331)
+.|+.|-+... .+++++.|+|...|+|. ++|..||+|||+|+|+ .++|+|+|+|+.+++++
T Consensus 37 G~P~~~pv~~~------------~d~~~l~f~t~~~s~K~-----~~l~~np~Vsl~v~~~--~~~v~v~G~a~~v~d~~ 97 (155)
T 2iab_A 37 GAPYLVPLSYL------------WDGETFLVATPAASPTG-----RNLSETGRVRLGIGPT--RDLVLVEGTALPLEPAG 97 (155)
T ss_dssp SCEEEEEEECE------------ECSSCEEEEEETTSHHH-----HHHHHHCEEEEEESST--TCEEEEEEEEEEECGGG
T ss_pred CCceEEEEEEE------------EECCEEEEEECCCCHHH-----HHHhhCCcEEEEEEcC--CCEEEEEEEEEEecCch
Confidence 67888888765 46778999999999996 3799999999999999 59999999999998654
No 55
>3a6r_A FMN-binding protein; electron transport, flavoprotein; HET: FMN; 1.20A {Desulfovibrio vulgaris} PDB: 1axj_A* 1flm_A* 3awh_A* 3amf_A* 3a6q_A* 1wll_A* 3a20_A* 1wli_A* 1wlk_A* 2e83_A*
Probab=98.36 E-value=7.5e-07 Score=73.41 Aligned_cols=74 Identities=15% Similarity=0.054 Sum_probs=62.2
Q ss_pred CceEEEEeecCCCCeeEEEEEE---EEeeCCeEEEEecCCCcchhhhhcCCcEEEEEEeCC------CCeEEEEEEEEEe
Q psy2497 52 ANAMFIATSTKNGIPSGRMVLL---KSYGKNGFVFFTNYNSRKGNELAENPQASLAFYWEP------LKRSVRIEGHVEK 122 (331)
Q Consensus 52 ~~~~~LATvd~dG~P~~R~V~~---r~~~~~gl~F~T~~~S~K~~eL~~np~val~f~~~~------~~~qvri~G~a~~ 122 (331)
...+.|||++ ||.|++-+.+. +-.|++.|++..+.-..-.++|++||+|+|+++..+ .+.-++|+|+|+.
T Consensus 13 ~~~~~iaT~~-~g~Pnvvptw~~~~~v~dD~~ili~~~~~~kT~~Nl~~N~kvai~v~~~e~~g~~g~~~gf~ikGta~~ 91 (122)
T 3a6r_A 13 QGVVAIATQG-EDGPHLVNTWNSYLKVLDGNRIVVPVGGMHKTEANVARDERVLMTLGSRKVAGRNGPGTGFLIRGSAAF 91 (122)
T ss_dssp CCEEEEEEEC-SSSEEEEEEEGGGCEEETTTEEEEEESSCHHHHHHHHHCCEEEEEEEEEEEECSSSEEEEEEEEEEEEE
T ss_pred CCeEEEEEcC-CCCCcEEeeeceEEEEecCCEEEEEccccHHHHHHHhhCCeEEEEEEecccccccCCCceEEEEEEEEE
Confidence 4568899999 99999998433 444556799999999999999999999999999775 5577999999999
Q ss_pred cCCc
Q psy2497 123 TSDK 126 (331)
Q Consensus 123 ~~~~ 126 (331)
+++.
T Consensus 92 ~~~G 95 (122)
T 3a6r_A 92 RTDG 95 (122)
T ss_dssp ESSS
T ss_pred Eecc
Confidence 8754
No 56
>2re7_A Uncharacterized protein; general stress protein COG3871, structural genomics, joint C structural genomics, JCSG; 2.50A {Psychrobacter arcticus}
Probab=98.32 E-value=5.2e-07 Score=73.95 Aligned_cols=64 Identities=14% Similarity=0.138 Sum_probs=52.4
Q ss_pred CCCccceEEEeccCCCCCCCCCCCcC--CCCceEeeecCCCccccccchhHhhCCceEEEeecCCCCceEEEEEEeeEcC
Q psy2497 198 SDRVHDRIVFKRPVPGEPLGPHSHEG--EDGWYYERLFPQPKQGIQYLHLKAENPQASLAFYWEPLKRSVRIEGHVEKTS 275 (331)
Q Consensus 198 ~~r~h~R~~f~k~~~~~~~~~~~~~~--~~gw~f~tl~pS~K~~~~~~~~l~~np~aal~f~W~~l~RQVri~G~v~~~~ 275 (331)
.+.|+.|-+... ..+ ++.+.|+|...|+|. ++|+.||+|||+|+|+...+||+|+|+|+.++
T Consensus 29 dG~P~~~pv~~~-----------~~~~~~~~l~f~t~~~s~K~-----~~l~~np~v~l~~~~~~~~~~v~v~G~a~~~~ 92 (134)
T 2re7_A 29 KGDIHAWPMTTS-----------EVNLDNKEIWFIGDKTSDVV-----KDIQDDARIGLTYATQDEKNYVSISGDAELPT 92 (134)
T ss_dssp TSCEEEEEECCS-----------EEETTTTEEEEEEETTSHHH-----HHHHHCCEEEEEEECTTSSCEEEEEEEEECCC
T ss_pred CCCEEEEecEee-----------eecCCCceEEEEECCCCHHH-----HHHhhCCcEEEEEEcCCCCeEEEEEEEEEEEC
Confidence 467888865543 122 456999999999996 36999999999999999999999999999886
Q ss_pred HH
Q psy2497 276 DK 277 (331)
Q Consensus 276 ~~ 277 (331)
+.
T Consensus 93 d~ 94 (134)
T 2re7_A 93 DK 94 (134)
T ss_dssp CH
T ss_pred CH
Confidence 53
No 57
>2i02_A General stress protein of COG3871; pyridoxamine 5'-phosphate like family protein, structural genomics, joint center for structural genomics; HET: MSE FMN P33; 1.80A {Nostoc punctiforme} SCOP: b.45.1.1
Probab=98.22 E-value=1.8e-06 Score=71.98 Aligned_cols=70 Identities=16% Similarity=0.191 Sum_probs=56.5
Q ss_pred CCCccceEEEe-ccCCCCCCCCCCCcC-CCCceEeeecCCCccccccchhHhhCCceEEEeecCCCCceEEEEEEeeEcC
Q psy2497 198 SDRVHDRIVFK-RPVPGEPLGPHSHEG-EDGWYYERLFPQPKQGIQYLHLKAENPQASLAFYWEPLKRSVRIEGHVEKTS 275 (331)
Q Consensus 198 ~~r~h~R~~f~-k~~~~~~~~~~~~~~-~~gw~f~tl~pS~K~~~~~~~~l~~np~aal~f~W~~l~RQVri~G~v~~~~ 275 (331)
.+.|+.|.+.. . ..+ ++.+.|+|...|+|. ++|.+||+|||+|+|+...+||+|.|+|+.++
T Consensus 33 dG~P~~~pv~~~~-----------~~~~~~~l~f~t~~~s~k~-----~~l~~np~v~l~~~~~~~~~~v~v~G~a~~v~ 96 (148)
T 2i02_A 33 DGSLHSYPMSKSG-----------DINSEATLWFFTYAGSHKV-----TEIEHHEQVNVSFSSPEQQRYVSISGTSQLVK 96 (148)
T ss_dssp TSCEEEEEEECBC-----------C---CCEEEEEEETTSHHH-----HHHHHCCEEEEEEEETTTTEEEEEEEEEEEEC
T ss_pred CCCEEEEEeEeeE-----------EEcCCCeEEEEEcCCCHHH-----HHHHhCCcEEEEEEcCCCCeEEEEEEEEEEEc
Confidence 56788888776 3 123 344999999999996 36999999999999999999999999999998
Q ss_pred HHHH-HHHH
Q psy2497 276 DKES-DDYF 283 (331)
Q Consensus 276 ~~es-~~yf 283 (331)
+.+. ++.|
T Consensus 97 d~~~~~~~~ 105 (148)
T 2i02_A 97 DRNKMRELW 105 (148)
T ss_dssp CHHHHHHHC
T ss_pred CHHHHHHHH
Confidence 7654 4555
No 58
>1vl7_A Hypothetical protein ALR5027; structural genomics, joint center for structural genomics, J protein structure initiative, PSI, oxidoreductase; 1.50A {Nostoc SP} SCOP: b.45.1.1
Probab=98.15 E-value=3e-06 Score=71.89 Aligned_cols=64 Identities=8% Similarity=-0.021 Sum_probs=51.7
Q ss_pred CCCccceEEEeccCCCCCCCCCCCcCCCCceEeeecCCCccccccchhHhhCCceEEEeecCCC-------CceEEEEEE
Q psy2497 198 SDRVHDRIVFKRPVPGEPLGPHSHEGEDGWYYERLFPQPKQGIQYLHLKAENPQASLAFYWEPL-------KRSVRIEGH 270 (331)
Q Consensus 198 ~~r~h~R~~f~k~~~~~~~~~~~~~~~~gw~f~tl~pS~K~~~~~~~~l~~np~aal~f~W~~l-------~RQVri~G~ 270 (331)
.|.|+.+.+.... .+++++.|++...|+|. ++|..||+|||+|.|+.. .++|+|.|+
T Consensus 41 dG~P~~~~v~~~~-----------~~~g~~~f~t~~~s~k~-----~nl~~np~vsl~v~~~~~~~~~~~~~~~v~i~G~ 104 (157)
T 1vl7_A 41 QGIPNGSYAPFVI-----------DDAKNIYIYVSGLAVHT-----KNIEANPLVNVLFVDDEAKTNQIFARRRLSFDCT 104 (157)
T ss_dssp TSCEEEEEEEEEE-----------CTTCCEEEEECTTSHHH-----HHHHHCCEEEEEEECCGGGCSSGGGCCEEEEEEE
T ss_pred CCCEEEEEEEEEE-----------cCCCCEEEEEeCccHHH-----HHHHhCCcEEEEEEcCccccCCcccCceEEEEEE
Confidence 4678888765540 22367999999999996 379999999999999763 689999999
Q ss_pred eeEcCHH
Q psy2497 271 VEKTSDK 277 (331)
Q Consensus 271 v~~~~~~ 277 (331)
|+.++++
T Consensus 105 a~~v~~~ 111 (157)
T 1vl7_A 105 ATLIERE 111 (157)
T ss_dssp EEEECTT
T ss_pred EEEcCCC
Confidence 9999875
No 59
>3in6_A FMN-binding protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, flavoprotein; HET: FMN; 2.12A {Syntrophomonas wolfei subsp}
Probab=98.06 E-value=6.5e-06 Score=69.80 Aligned_cols=69 Identities=9% Similarity=0.020 Sum_probs=55.4
Q ss_pred eEEEEeecCCCCeeEEEEEEEEeeCC-eEEEEecCCCcchhhhhcCCcEEEEEE---eCCCCeEEEEEEEEEe
Q psy2497 54 AMFIATSTKNGIPSGRMVLLKSYGKN-GFVFFTNYNSRKGNELAENPQASLAFY---WEPLKRSVRIEGHVEK 122 (331)
Q Consensus 54 ~~~LATvd~dG~P~~R~V~~r~~~~~-gl~F~T~~~S~K~~eL~~np~val~f~---~~~~~~qvri~G~a~~ 122 (331)
.++|||+|.||.|.+-++..-.+-++ .|+|.-.....=.+||++||+|+++|+ .+...++.||.++...
T Consensus 32 ~~~LATAdkdG~PNVa~~~~~~~~Dd~tI~iad~f~~kT~~NL~eNP~aav~~~~~~~~~~~KG~Rl~l~~~e 104 (148)
T 3in6_A 32 STTLSTVDRNYEVNIAVISVLEMIGDDTIICARFGADKTYANLKETGKGVFMVLLTDNDKSKDGIRVYVELSA 104 (148)
T ss_dssp SEEEEEECTTCCEEEEECCCEEEETTTEEEEEESSCHHHHHHHHHHCEEEEEEEEESSSCEEEEEEEEEEEEE
T ss_pred eEEEEEcCCCCCccEEEEeeeEEecCCEEEEEeccchhHHHHHHhCCcEEEEEEEcCCCCccceEEEEEEEEE
Confidence 58999999999999998886555554 577766666677889999999999999 6666678888876544
No 60
>3ec6_A General stress protein 26; alpha-beta structure, structural genomics of niaid; HET: FAD; 1.60A {Bacillus anthracis} SCOP: b.45.1.0
Probab=98.01 E-value=7.6e-06 Score=67.66 Aligned_cols=70 Identities=13% Similarity=0.130 Sum_probs=56.3
Q ss_pred CCCccceEEEeccCCCCCCCCCCCcCCCCceEeeecCCCccccccchhHhhCCceEEEeecC---CCCceEEEEEEeeEc
Q psy2497 198 SDRVHDRIVFKRPVPGEPLGPHSHEGEDGWYYERLFPQPKQGIQYLHLKAENPQASLAFYWE---PLKRSVRIEGHVEKT 274 (331)
Q Consensus 198 ~~r~h~R~~f~k~~~~~~~~~~~~~~~~gw~f~tl~pS~K~~~~~~~~l~~np~aal~f~W~---~l~RQVri~G~v~~~ 274 (331)
.+.||.|.+... .+++.+.|.|...|+|. ++|++||+|||+|.|. ...++|+|.|+|+.+
T Consensus 25 dg~P~~~pv~~~------------~~~~~l~f~t~~~s~k~-----~~l~~np~v~l~v~~~~d~~~~~~v~v~G~a~~~ 87 (139)
T 3ec6_A 25 NDKPHSAFMMFF------------HEDFVLYVATDRQSKKI-----TDIENNPNVHVLLGREGKKLDEDYIEVEGLASIE 87 (139)
T ss_dssp TTEEEEEEEECE------------EETTEEEEEEETTCHHH-----HHHHHCCEEEEEECC---CTTCCEEEEEEEEEEE
T ss_pred CCCEEEEEEEEE------------EeCCEEEEEECCCCHHH-----HHHHhCCcEEEEEEecCCCCCccEEEEEEEEEEE
Confidence 356888877665 35677999999999996 3799999999999653 468999999999999
Q ss_pred C-HHHHHHHHh
Q psy2497 275 S-DKESDDYFQ 284 (331)
Q Consensus 275 ~-~~es~~yf~ 284 (331)
. .++.+++|.
T Consensus 88 ~d~~~~~~~~~ 98 (139)
T 3ec6_A 88 EDSTLKNKFWN 98 (139)
T ss_dssp CCHHHHHHHCC
T ss_pred cCHHHHHHHHH
Confidence 6 467788885
No 61
>3db0_A LIN2891 protein; putative pyridoxamine 5'-phosphate oxidase, STR genomics, joint center for structural genomics, JCSG; 2.00A {Listeria innocua}
Probab=97.98 E-value=1.1e-05 Score=65.54 Aligned_cols=70 Identities=16% Similarity=0.141 Sum_probs=53.9
Q ss_pred CCccceEEEeccCCCCCCCCCCCcCCCCceEeeecCCCccccccchhHhhCCceEEEeec-CCCCceEEEEEEeeEc-CH
Q psy2497 199 DRVHDRIVFKRPVPGEPLGPHSHEGEDGWYYERLFPQPKQGIQYLHLKAENPQASLAFYW-EPLKRSVRIEGHVEKT-SD 276 (331)
Q Consensus 199 ~r~h~R~~f~k~~~~~~~~~~~~~~~~gw~f~tl~pS~K~~~~~~~~l~~np~aal~f~W-~~l~RQVri~G~v~~~-~~ 276 (331)
+.|+.|-+... .+++.+.|.|...|+|. + +|..||+|||++.+ +...++|+|.|+|+.+ +.
T Consensus 28 g~P~~~pv~~~------------~~~~~l~f~t~~~s~k~-~----~l~~np~v~l~v~~~~~~~~~v~v~G~a~~v~d~ 90 (128)
T 3db0_A 28 DFPHARYMTFL------------HDGLTLYTPSGKELPKT-E----EVRRNPHVCVLIGYDSPGSAFLEINGLASLEEDE 90 (128)
T ss_dssp TEEEEEEEECE------------EETTEEEEEC----CTT-C----CCCCCCEEEEEECCCSTTCCEEEEEEEEEECCCH
T ss_pred CCEEEEEEEEE------------ecCCEEEEEECCCCHHH-H----HHHhCCceEEEEEEcCCCCcEEEEEEEEEEEcCH
Confidence 56788877655 35667889999999996 3 69999999999877 7788999999999999 46
Q ss_pred HHHHHHHhc
Q psy2497 277 KESDDYFQS 285 (331)
Q Consensus 277 ~es~~yf~~ 285 (331)
++.+++|..
T Consensus 91 ~~~~~~~~~ 99 (128)
T 3db0_A 91 SIKERIWEN 99 (128)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 778888864
No 62
>2hq7_A Protein, related to general stress protein 26(GS2 B.subtilis; NP_350077.1, structural genomics, joint center for structural genomics; 2.00A {Clostridium acetobutylicum} SCOP: b.45.1.1
Probab=97.90 E-value=1e-05 Score=66.90 Aligned_cols=65 Identities=9% Similarity=0.076 Sum_probs=52.1
Q ss_pred CCCccceEEEeccCCCCCCCCCCCcC-CCCceEeeecCCCccccccchhHhhCCceEEEeecCCCCceEEEEEEeeEcCH
Q psy2497 198 SDRVHDRIVFKRPVPGEPLGPHSHEG-EDGWYYERLFPQPKQGIQYLHLKAENPQASLAFYWEPLKRSVRIEGHVEKTSD 276 (331)
Q Consensus 198 ~~r~h~R~~f~k~~~~~~~~~~~~~~-~~gw~f~tl~pS~K~~~~~~~~l~~np~aal~f~W~~l~RQVri~G~v~~~~~ 276 (331)
.+.|+.|-+... ..+ ++.+.|.|...|+|. ++|.+||+||++|+++...++|+|.|+|+.+++
T Consensus 29 ~G~P~~~pv~~~-----------~~~~~~~l~f~t~~~s~k~-----~~l~~np~v~l~~~~~~~~~~v~v~G~a~~v~d 92 (146)
T 2hq7_A 29 NGYPNIKAMMRL-----------KHDGLKKFWLSTNTSTRMV-----ERLKKNNKICLYFVDDNKFAGLMLVGTIEILHD 92 (146)
T ss_dssp GGCEEEEEEEEE-----------EEETTTEEEEEEECCHHHH-----HHHHHCCEEEEEEECSSSSEEEEEEEEEEEECC
T ss_pred CCCEEEEEEEEE-----------EEcCCCEEEEEecCCCHHH-----HHHhhCCeEEEEEECCCCceEEEEEEEEEEEcC
Confidence 355777766554 012 256889999999996 369999999999999999999999999999976
Q ss_pred HH
Q psy2497 277 KE 278 (331)
Q Consensus 277 ~e 278 (331)
.+
T Consensus 93 ~~ 94 (146)
T 2hq7_A 93 RA 94 (146)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 63
>3f7e_A Pyridoxamine 5'-phosphate oxidase-related, FMN- binding; F420 dependent reductase, unknown function; HET: MSE; 1.23A {Mycobacterium smegmatis}
Probab=97.73 E-value=2.1e-05 Score=64.25 Aligned_cols=62 Identities=11% Similarity=0.065 Sum_probs=50.0
Q ss_pred CCCccceEEEeccCCCCCCCCCCCcCCCCceEeeecCCCccccccchhHhhCCceEEEeecCCC-CceEEEEEEeeEcCH
Q psy2497 198 SDRVHDRIVFKRPVPGEPLGPHSHEGEDGWYYERLFPQPKQGIQYLHLKAENPQASLAFYWEPL-KRSVRIEGHVEKTSD 276 (331)
Q Consensus 198 ~~r~h~R~~f~k~~~~~~~~~~~~~~~~gw~f~tl~pS~K~~~~~~~~l~~np~aal~f~W~~l-~RQVri~G~v~~~~~ 276 (331)
.|.|+.+-+... .+++.+.|.+...|+|. +.|.+||+||++|.++.- .++|+|+|+++.+++
T Consensus 26 dG~P~~~pv~~~------------~d~~~l~f~t~~~s~k~-----~~l~~np~v~l~v~~~~~~~~~v~v~G~a~~v~~ 88 (131)
T 3f7e_A 26 DGTPQVNAMWFA------------WDGEVLRFTHTTKRQKY-----RNIKANPAVAMSVIDPDNPYRYLEVRGLVEDIVP 88 (131)
T ss_dssp TSCEEEEEECCE------------ECSSCEEEEEETTSHHH-----HHHHHCCEEEEEEECSSCTTCEEEEEEEEEEEEE
T ss_pred CCCEEEEEEEEE------------EECCEEEEEECCCCHHH-----HHHhhCCcEEEEEEcCCCCeeEEEEEEEEEEecc
Confidence 456776655443 34567899999999995 379999999999999874 799999999998875
No 64
>2htd_A Predicted flavin-nucleotide-binding protein from family structurally related to pyridoxine...; putative pyridoxamine 5'-phosphate oxidase; HET: MSE; 1.60A {Lactobacillus delbrueckii subsp}
Probab=97.71 E-value=3.3e-05 Score=64.42 Aligned_cols=56 Identities=13% Similarity=0.039 Sum_probs=47.3
Q ss_pred CCCCceEeeecCCCccccccchhHhhCCceEEEeecCCCCceEEEEEEeeEcCHHHHHHHH
Q psy2497 223 GEDGWYYERLFPQPKQGIQYLHLKAENPQASLAFYWEPLKRSVRIEGHVEKTSDKESDDYF 283 (331)
Q Consensus 223 ~~~gw~f~tl~pS~K~~~~~~~~l~~np~aal~f~W~~l~RQVri~G~v~~~~~~es~~yf 283 (331)
+++.+.|.+...++|. ++|.+||+|||+|+|+...++|||.|+|+.+++.+--+-+
T Consensus 64 d~~~l~f~~~~~~~k~-----~nL~~np~V~l~~~~~~~~~~v~i~G~a~~v~d~~~~~~l 119 (140)
T 2htd_A 64 DPSHLQYLEKTKGEAY-----ENIKRGSKVALVAADVPSHTAVRVLATAEVHEDDDYAKKV 119 (140)
T ss_dssp ETTEEEEEESSCCHHH-----HHHHTTCCEEEEEEETTTTEEEEEEEEEEEESSSHHHHHH
T ss_pred CCCEEEEeccCCchHH-----HHhhcCCeEEEEEEecCCCCEEEEEEEEEEecChHHHHHH
Confidence 4567888888888885 3799999999999999999999999999998876554444
No 65
>2ol5_A PAI 2 protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.50A {Geobacillus stearothermophilus}
Probab=97.66 E-value=0.0014 Score=57.99 Aligned_cols=71 Identities=11% Similarity=0.011 Sum_probs=55.9
Q ss_pred CceEEEEeecCCCCeeEEEEEEEEeeCC--eEEEEecCCCcchhhhhcCCcEEEEEEeCCC-----------------Ce
Q psy2497 52 ANAMFIATSTKNGIPSGRMVLLKSYGKN--GFVFFTNYNSRKGNELAENPQASLAFYWEPL-----------------KR 112 (331)
Q Consensus 52 ~~~~~LATvd~dG~P~~R~V~~r~~~~~--gl~F~T~~~S~K~~eL~~np~val~f~~~~~-----------------~~ 112 (331)
..+++|+|++ +|.|.+-++.+-- +++ .||||.....+|.+.|.. ++|+++|.-+.. -+
T Consensus 22 ~~~g~L~~~~-~~~py~~plpf~~-~~~~~~Ly~H~A~~n~k~~~l~~-~~V~~~~~g~~~yisps~y~~~~~vpT~nY~ 98 (202)
T 2ol5_A 22 NSFATLVSMH-QRELFATHLPLLL-DREKTCLYGHFARSNPQWNDIQH-QTVLAIFHGPHCYISPSWYETNQAVPTWNYV 98 (202)
T ss_dssp SCEEEEEEEE-TTEEEEEEEECEE-CTTSSEEEEEEETTSGGGGGCTT-SCEEEEEEEEEEEECGGGSSCSCCCCEEEEE
T ss_pred CCEEEEEEcc-CCccEEEEeeEEE-ECCCCEEEEEECCcChHHHhhCC-CCEEEEEEcCCEEechhhcccCCCCCCcceE
Confidence 4568999998 5679999888853 455 699999999999999999 999998874321 14
Q ss_pred EEEEEEEEEecCC
Q psy2497 113 SVRIEGHVEKTSD 125 (331)
Q Consensus 113 qvri~G~a~~~~~ 125 (331)
-|.+.|++++++|
T Consensus 99 SV~~~G~~~~v~D 111 (202)
T 2ol5_A 99 AVHVYGNVELIND 111 (202)
T ss_dssp EEEEEEEEEECCC
T ss_pred EEEEEEEEEEECC
Confidence 5777888888764
No 66
>2fhq_A Putative general stress protein; alpha-beta structure, structural genomics, PSI, protein STRU initiative; HET: MSE; 1.87A {Bacteroides thetaiotaomicron} SCOP: b.45.1.1
Probab=97.54 E-value=7.5e-05 Score=61.22 Aligned_cols=68 Identities=19% Similarity=0.122 Sum_probs=52.7
Q ss_pred CCCccceEEEeccCCCCCCCCCCCcCC-CCceEeeecCCCccccccchhHhhCCceEEEeecCCCCceEEEEEEeeEcCH
Q psy2497 198 SDRVHDRIVFKRPVPGEPLGPHSHEGE-DGWYYERLFPQPKQGIQYLHLKAENPQASLAFYWEPLKRSVRIEGHVEKTSD 276 (331)
Q Consensus 198 ~~r~h~R~~f~k~~~~~~~~~~~~~~~-~gw~f~tl~pS~K~~~~~~~~l~~np~aal~f~W~~l~RQVri~G~v~~~~~ 276 (331)
.+.|+.+-+... ..++ +.+.|.+...|+|. +.|.+||+||++|+++. ++|+|.|+++.+++
T Consensus 31 ~G~P~~~pv~~~-----------~~~~~~~l~f~t~~~s~k~-----~~l~~np~v~l~~~~~~--~~v~v~G~a~~v~d 92 (141)
T 2fhq_A 31 EGYPRPVPMSKI-----------AAEGISTIWMSTGADSLKT-----IDFLSNPKAGLCFQEKG--DSVALMGEVEVVTD 92 (141)
T ss_dssp TSCEEEEEEECC-----------EEETTTEEEEEEETTSHHH-----HHHHHCCEEEEEEEETT--EEEEEEEEEEEECC
T ss_pred CCCEEEEeeEEE-----------EeCCCCeEEEEeCCCCHHH-----HHHHhCCcEEEEEEeCC--CEEEEEEEEEEECC
Confidence 466887776643 0122 56889999999995 37999999999999996 89999999999987
Q ss_pred H-HHHHHH
Q psy2497 277 K-ESDDYF 283 (331)
Q Consensus 277 ~-es~~yf 283 (331)
. +-++.|
T Consensus 93 ~~~~~~~~ 100 (141)
T 2fhq_A 93 EKLKQELW 100 (141)
T ss_dssp HHHHHHSC
T ss_pred HHHHHHHH
Confidence 4 445544
No 67
>3ba3_A Protein LP_0091, pyridoxamine 5'-phosphate oxidase-like protein; NP_783940.1, structural genomics; HET: MSE; 1.55A {Lactobacillus plantarum WCFS1}
Probab=97.44 E-value=0.00045 Score=58.37 Aligned_cols=77 Identities=13% Similarity=0.189 Sum_probs=58.9
Q ss_pred CCCccceEEEeccCCCCCCCCCCCcCCCCceEeeecCCCccccccchhHhhCCceEEEeecCCC---CceEEEE-EEeeE
Q psy2497 198 SDRVHDRIVFKRPVPGEPLGPHSHEGEDGWYYERLFPQPKQGIQYLHLKAENPQASLAFYWEPL---KRSVRIE-GHVEK 273 (331)
Q Consensus 198 ~~r~h~R~~f~k~~~~~~~~~~~~~~~~gw~f~tl~pS~K~~~~~~~~l~~np~aal~f~W~~l---~RQVri~-G~v~~ 273 (331)
.+.|+.|..-... -..+++.+.|.|...|.|- ++|.+||+||++.+=+.- ..||||+ |.|+.
T Consensus 24 ~g~P~vR~v~f~~---------~~~~~~~LYF~T~~~k~k~-----~ql~~Np~V~i~~~~~d~~~~~~~IRi~~G~a~~ 89 (145)
T 3ba3_A 24 NNEADVKIVNFVW---------YEAQPDTLYFSSVKTSPAL-----KVYDQNPDIAFITIPNDGTAGNPYLRAQHVKLQR 89 (145)
T ss_dssp TTEEEEEEEECEE---------CTTSTTEEEEEEETTCTHH-----HHHTTCCEEEEEEEECTTCTTCCEEEEEEEEEEE
T ss_pred CCCEEEEEEEEEE---------EecCCCEEEEEECCCCHHH-----HHHHhCCCEEEEEECCCCCccceEEEEEeEEEEE
Confidence 3568888764320 0124678999999999996 379999999999775555 5999999 99999
Q ss_pred cC---HHHHHHHHhcCCC
Q psy2497 274 TS---DKESDDYFQSRPY 288 (331)
Q Consensus 274 ~~---~~es~~yf~~Rp~ 288 (331)
.+ .+-.+.+|..-|.
T Consensus 90 ~~~~~~~~k~~~~e~~P~ 107 (145)
T 3ba3_A 90 STKTMTDLLPQYLETVPN 107 (145)
T ss_dssp CSCCHHHHHHHHHHHSTT
T ss_pred cCCchHHHHHHHHHhChh
Confidence 88 4677788876664
No 68
>3r5l_A Deazaflavin-dependent nitroreductase; PA-824, split barrel-like fold, DUF385, deazaflavin-dependen nitroreductase, nitroimidazoles; HET: MES; 1.55A {Mycobacterium tuberculosis} PDB: 3r5p_A 3r5w_A* 3r5r_A*
Probab=97.32 E-value=0.00097 Score=54.69 Aligned_cols=75 Identities=15% Similarity=0.235 Sum_probs=59.3
Q ss_pred CceEEEEeecC-CCCeeEEEEEEEEeeCCeEEEEecC-----CCcchhhhhcCCcEEEEEEeCCCCeEEEEEEEEEecCC
Q psy2497 52 ANAMFIATSTK-NGIPSGRMVLLKSYGKNGFVFFTNY-----NSRKGNELAENPQASLAFYWEPLKRSVRIEGHVEKTSD 125 (331)
Q Consensus 52 ~~~~~LATvd~-dG~P~~R~V~~r~~~~~gl~F~T~~-----~S~K~~eL~~np~val~f~~~~~~~qvri~G~a~~~~~ 125 (331)
..++.|+|++. +|.|+.-+|.+.. +++++++..+. ++..++||.+||.|.|... . -+..++|+++++
T Consensus 15 ~p~~~Ltt~GRkSG~pr~tPv~~~~-~g~~~~vvas~~G~~~~p~W~~Nl~A~P~v~v~~~----~--~~~~~~A~~l~~ 87 (122)
T 3r5l_A 15 IPVALLTTTGRKTGQPRVNPLYFLR-DGGRVIVAASKGGAEKNPMWYLNLKANPKVQVQIK----K--EVLDLTARDATD 87 (122)
T ss_dssp CCCEEEEEECTTTCSEEEEEEEEEE-ETTEEEEECSCCGGGCSCHHHHHHHHCCEEEEEET----T--EEEEEEEEECCH
T ss_pred CcEEEEEEcCCCCCCEEEEEEEEEE-ECCEEEEEEecCCCCCCCHHHHhhccCCcEEEEEC----C--EEEEEEEEECCc
Confidence 46789999997 7999999998864 55677776542 4677999999999999873 1 268899999988
Q ss_pred cchhHHHh
Q psy2497 126 KESDDYFQ 133 (331)
Q Consensus 126 ~~~~~~~~ 133 (331)
++.++.|.
T Consensus 88 ~Er~~~~~ 95 (122)
T 3r5l_A 88 EERAEYWP 95 (122)
T ss_dssp HHHHHHHH
T ss_pred chHHHHHH
Confidence 88777774
No 69
>2asf_A Hypothetical protein RV2074; H37RV, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: CIT; 1.60A {Mycobacterium tuberculosis} SCOP: b.45.1.1
Probab=97.24 E-value=0.00025 Score=58.23 Aligned_cols=61 Identities=16% Similarity=-0.094 Sum_probs=48.4
Q ss_pred CCCccceEEEeccCCCCCCCCCCCcC--CCCceEeeecCCCccccccchhHhhCCceEEEeecCCCCceEEEEEEeeEcC
Q psy2497 198 SDRVHDRIVFKRPVPGEPLGPHSHEG--EDGWYYERLFPQPKQGIQYLHLKAENPQASLAFYWEPLKRSVRIEGHVEKTS 275 (331)
Q Consensus 198 ~~r~h~R~~f~k~~~~~~~~~~~~~~--~~gw~f~tl~pS~K~~~~~~~~l~~np~aal~f~W~~l~RQVri~G~v~~~~ 275 (331)
.|.||.+-+... .+ ++.+.|.|...|+|. +.|..||+|||+|+++ .+.|+|.|+++.++
T Consensus 32 dG~P~~~pv~~~------------~~~~~~~l~f~t~~~s~k~-----~~l~~np~V~l~~~~~--~~~v~v~G~a~~~~ 92 (137)
T 2asf_A 32 DNSPHVVAVGFT------------FDPKTHIARVITTGGSQKA-----VNADRSGLAVLSQVDG--ARWLSLEGRAAVNS 92 (137)
T ss_dssp TSCEEEEEECCE------------EETTTTEEEEEEETTCHHH-----HHHHHHCEEEEEEEET--TEEEEEEEEEEEEC
T ss_pred CCCEEEEEEEEE------------EECCCCEEEEEeCCCCHHH-----HHHhhCCeEEEEEECC--CCEEEEEEEEEEec
Confidence 456777766443 22 256899999999996 3699999999999987 49999999999997
Q ss_pred HH
Q psy2497 276 DK 277 (331)
Q Consensus 276 ~~ 277 (331)
+.
T Consensus 93 d~ 94 (137)
T 2asf_A 93 DI 94 (137)
T ss_dssp CH
T ss_pred CH
Confidence 54
No 70
>2aq6_A Pyridoxine 5'-phosphate oxidase; pyridoxal 5'-phosphate, STR genomics, PSI, protein structure initiative, TB structural consortium; HET: PLP; 1.70A {Mycobacterium tuberculosis} SCOP: b.45.1.1 PDB: 1xxo_A 1y30_A* 1w9a_A*
Probab=97.12 E-value=0.00068 Score=55.75 Aligned_cols=63 Identities=16% Similarity=-0.019 Sum_probs=48.8
Q ss_pred CCCccceEEEeccCCCCCCCCCCCcCCC--CceEeeecCCCccccccchhHhhCCceEEEeecCCCCceEEEEEEeeEcC
Q psy2497 198 SDRVHDRIVFKRPVPGEPLGPHSHEGED--GWYYERLFPQPKQGIQYLHLKAENPQASLAFYWEPLKRSVRIEGHVEKTS 275 (331)
Q Consensus 198 ~~r~h~R~~f~k~~~~~~~~~~~~~~~~--gw~f~tl~pS~K~~~~~~~~l~~np~aal~f~W~~l~RQVri~G~v~~~~ 275 (331)
.+.|+.+-+... .+++ .+.|.+...|+|. +.|.+||+|+++|..+.-.++|+|.|+|+.++
T Consensus 28 ~G~P~~~pv~~~------------~~~~~~~l~~~t~~~~~k~-----~~l~~np~v~l~~~~~~~~~~v~v~G~a~~~~ 90 (147)
T 2aq6_A 28 DGRPQLSNVQYH------------FDPRKLLIQVSIAEPRAKT-----RNLRRDPRASILVDADDGWSYAVAEGTAQLTP 90 (147)
T ss_dssp TSCEEEEEEECE------------EETTTTEEEEEEETTSHHH-----HHHHHCCEEEEEEECTTSSCEEEEEEECEECC
T ss_pred CCCEEEEEEEEE------------EcCCCCEEEEEecCCCHHH-----HHHhhCCcEEEEEEcCCCcEEEEEEEEEEEcC
Confidence 456777665543 2333 4678888889995 36999999999999877668999999999998
Q ss_pred HH
Q psy2497 276 DK 277 (331)
Q Consensus 276 ~~ 277 (331)
+.
T Consensus 91 d~ 92 (147)
T 2aq6_A 91 PA 92 (147)
T ss_dssp CC
T ss_pred CC
Confidence 73
No 71
>1rfe_A Hypothetical protein RV2991; structural genomics, TB, FMN BIN PSI, protein structure initiative, TB structural genomics consortium; 2.00A {Mycobacterium tuberculosis} SCOP: b.45.1.1
Probab=96.85 E-value=0.0017 Score=54.29 Aligned_cols=64 Identities=17% Similarity=0.129 Sum_probs=49.1
Q ss_pred CCCccceEEEeccCCCCCCCCCCCcCCCCceEeeecCCCccccccchhHhhCCceEEEeecCCC---CceEEEEEEeeEc
Q psy2497 198 SDRVHDRIVFKRPVPGEPLGPHSHEGEDGWYYERLFPQPKQGIQYLHLKAENPQASLAFYWEPL---KRSVRIEGHVEKT 274 (331)
Q Consensus 198 ~~r~h~R~~f~k~~~~~~~~~~~~~~~~gw~f~tl~pS~K~~~~~~~~l~~np~aal~f~W~~l---~RQVri~G~v~~~ 274 (331)
.+.|+.+-+... .+++.+.|.+...|+|. +.|.+||+|+++|.-+.. .+.|+|.|+|+.+
T Consensus 33 ~G~P~~~pv~~~------------~~~~~l~~~t~~~~~k~-----~~l~~np~v~l~~~~~~~~~~~~~v~~~G~a~~v 95 (162)
T 1rfe_A 33 DGQPHLTAMWYA------------VIDGEIWLETKAKSQKA-----VNLRRDPRVSFLLEDGDTYDTLRGVSFEGVAEIV 95 (162)
T ss_dssp TSCEEEEEECCE------------EETTEEEEEEETTSHHH-----HHHHHCCEEEEEEEECSSGGGCEEEEEEEEEEEE
T ss_pred CCCEEEEEEEEE------------EECCEEEEEecCccHHH-----HHHhhCCeEEEEEEcCCCcccccEEEEEEEEEEe
Confidence 456777666443 34567889998889995 379999999999975543 3789999999999
Q ss_pred CHHH
Q psy2497 275 SDKE 278 (331)
Q Consensus 275 ~~~e 278 (331)
++++
T Consensus 96 ~d~~ 99 (162)
T 1rfe_A 96 EEPE 99 (162)
T ss_dssp CCHH
T ss_pred CChH
Confidence 8753
No 72
>2arz_A Hypothetical protein PA4388; hypothetical protein,structural genomics,MCSG, PSI, protein structure initiative; 2.00A {Pseudomonas aeruginosa} SCOP: b.45.1.1
Probab=95.08 E-value=0.052 Score=48.78 Aligned_cols=73 Identities=11% Similarity=0.116 Sum_probs=52.4
Q ss_pred CCCccceEE-EeccCCCCCCCCCCCcCCCC-ceEeeecCCCccccccchhHhhCCceEEEeecCCC-----CceEEEEEE
Q psy2497 198 SDRVHDRIV-FKRPVPGEPLGPHSHEGEDG-WYYERLFPQPKQGIQYLHLKAENPQASLAFYWEPL-----KRSVRIEGH 270 (331)
Q Consensus 198 ~~r~h~R~~-f~k~~~~~~~~~~~~~~~~g-w~f~tl~pS~K~~~~~~~~l~~np~aal~f~W~~l-----~RQVri~G~ 270 (331)
.|.|+...+ |.. +++| .+|.+...|+|. +.|..||+|||++.-+.- .+-|+|.|+
T Consensus 32 dG~P~~s~v~~~~-------------d~~g~~~f~~s~~s~k~-----~nl~~nprvsl~v~~~~~~~~~~~~~v~l~G~ 93 (247)
T 2arz_A 32 PGFPFGSVVPYCL-------------DAEGRPLILISRIAQHT-----HNLQADPRCSMLVGERGAEDIQAVGRLTLLAE 93 (247)
T ss_dssp TTCEEEEEEECEE-------------CTTSCEEEEEETTSHHH-----HHHHHCCEEEEEEECTTCSSTTSSCEEEEEEE
T ss_pred CCcceEEEEEEEE-------------CCCCCEEEEEeChhHHH-----HHHHhCCCeEEEEecCCCCChhhCceEEEEEE
Confidence 466777665 333 3344 888888889995 379999999999986542 246999999
Q ss_pred eeEcCHHH----HHHHHhcCCC
Q psy2497 271 VEKTSDKE----SDDYFQSRPY 288 (331)
Q Consensus 271 v~~~~~~e----s~~yf~~Rp~ 288 (331)
++.+++++ .+.|+..-|.
T Consensus 94 a~~v~d~e~~~~~~~~~~~~P~ 115 (247)
T 2arz_A 94 ARQLAEEEVAAAAERYYRYFPE 115 (247)
T ss_dssp EEECCHHHHHHHHHHHHHHCGG
T ss_pred EEECCcHHHHHHHHHHHHHCcC
Confidence 99999753 4455554453
No 73
>3h96_A F420-H2 dependent reductase A; pnpox, flavin, aflatoxin, flavoprotein; 2.00A {Mycobacterium smegmatis str}
Probab=94.93 E-value=0.064 Score=44.97 Aligned_cols=76 Identities=11% Similarity=0.115 Sum_probs=59.3
Q ss_pred CceEEEEeecC-CCCeeEEEEEEEEeeC--CeEEEE-ec----CCCcchhhhhcCCcEEEEEEeCCCCeEEEEEEEEEec
Q psy2497 52 ANAMFIATSTK-NGIPSGRMVLLKSYGK--NGFVFF-TN----YNSRKGNELAENPQASLAFYWEPLKRSVRIEGHVEKT 123 (331)
Q Consensus 52 ~~~~~LATvd~-dG~P~~R~V~~r~~~~--~gl~F~-T~----~~S~K~~eL~~np~val~f~~~~~~~qvri~G~a~~~ 123 (331)
...+.|.|++. .|.|+.-+|.+...+. +.+++. +. .++.-+.||.+||.|.|... . -+..++|+++
T Consensus 30 ~~~llLtt~GRkSG~~r~tPl~~~~~g~~~~~~~vvas~gG~~~~p~W~~Nl~A~p~v~v~~g----~--~~~~~~A~~~ 103 (143)
T 3h96_A 30 APMVLVHHVGRKTGKAAVTPMMYLPSDDDPGTIYVFASKAGAASNPAWYYNLTTAGTAQVEVG----T--ETYAVGVTEV 103 (143)
T ss_dssp SCEEEEEEECTTTCCEEEEEEECEECSSCTTEEEEECCGGGCSSCCHHHHHHHHHSEEEEEET----T--EEEEEEEEEE
T ss_pred CcEEEEEEcCCCCCCEEEEEEEEEEecCcCCcEEEEEcCCCCCCCChHHHhhhhCCcEEEEEC----C--EEEEEEEEec
Confidence 46789999986 6999999998865442 566665 43 36888999999999999763 1 2578899999
Q ss_pred CCcchhHHHh
Q psy2497 124 SDKESDDYFQ 133 (331)
Q Consensus 124 ~~~~~~~~~~ 133 (331)
+++|.++.|.
T Consensus 104 ~~~Er~~~~~ 113 (143)
T 3h96_A 104 TGEDRDRIYS 113 (143)
T ss_dssp CHHHHHHHHH
T ss_pred CchHHHHHHH
Confidence 9998888885
No 74
>3r5y_A Putative uncharacterized protein; PA-824, nitroimidazoles, split barrel-like fold, DUF385, DEA dependent nitroreductase, unknown function; HET: F42; 1.80A {Nocardia farcinica}
Probab=94.89 E-value=0.047 Score=46.01 Aligned_cols=75 Identities=11% Similarity=0.141 Sum_probs=58.1
Q ss_pred CceEEEEeecC-CCCeeEEEEEEEEeeCCeEEEEecC-----CCcchhhhhcCCcEEEEEEeCCCCeEEEEEEEEEecCC
Q psy2497 52 ANAMFIATSTK-NGIPSGRMVLLKSYGKNGFVFFTNY-----NSRKGNELAENPQASLAFYWEPLKRSVRIEGHVEKTSD 125 (331)
Q Consensus 52 ~~~~~LATvd~-dG~P~~R~V~~r~~~~~gl~F~T~~-----~S~K~~eL~~np~val~f~~~~~~~qvri~G~a~~~~~ 125 (331)
..++.|.|++. .|.|+.-+|.+.. +++.+++..+. ++.-+.||.+||.|.|..- . -+..++|+++++
T Consensus 39 ~p~~lLtt~GRkSG~~r~tPl~~~~-~~g~~~vVas~gG~~~~p~W~~Nl~A~p~v~v~~g----~--~~~~~~Ar~~~~ 111 (147)
T 3r5y_A 39 RPLVILTTVGRKTGALRKTPVMRVE-HDGRYAVVASQGGAPTHPAWYFNLVADPRAQLRDK----D--AVLSVVARELAG 111 (147)
T ss_dssp EEEEEEEEECTTTCCEEEEEEECCE-ETTEEEEECCGGGCSSCCHHHHHHHHCCEEEEEET----T--EEEEEEEEECCH
T ss_pred ccEEEEEEcCCCCCCEEEEEEEEEE-ECCEEEEEEcCCCCCCCChHHHhhhhCCcEEEEEC----C--EEEEEEEEECCc
Confidence 45689999986 6999999988754 34566655433 5688999999999999762 1 257889999999
Q ss_pred cchhHHHh
Q psy2497 126 KESDDYFQ 133 (331)
Q Consensus 126 ~~~~~~~~ 133 (331)
++.++.|.
T Consensus 112 ~Er~~~w~ 119 (147)
T 3r5y_A 112 PERAEWWE 119 (147)
T ss_dssp HHHHHHHH
T ss_pred hHHHHHHH
Confidence 98888885
No 75
>2q9k_A Uncharacterized protein; split barrel-like fold, structural genomics, joint center FO structural genomics, JCSG; HET: UNL; 1.59A {Exiguobacterium sibiricum}
Probab=94.87 E-value=0.033 Score=46.78 Aligned_cols=49 Identities=10% Similarity=0.059 Sum_probs=41.3
Q ss_pred CCCCceEeeecCCCccccccchhHhhCCceEEEeecCCCCceEEEEEEeeEcCHHH
Q psy2497 223 GEDGWYYERLFPQPKQGIQYLHLKAENPQASLAFYWEPLKRSVRIEGHVEKTSDKE 278 (331)
Q Consensus 223 ~~~gw~f~tl~pS~K~~~~~~~~l~~np~aal~f~W~~l~RQVri~G~v~~~~~~e 278 (331)
+++...|.+...|+|. ++|..||+|+++|.-+. .-++|.|+|+.+.+.+
T Consensus 48 d~~~l~f~~~~~~~k~-----~nl~~np~Vsl~v~~~~--~~~~i~G~A~~v~d~~ 96 (151)
T 2q9k_A 48 DETTIRFAIEADSLLV-----KTLADHPVFTLIFFADQ--STYSLTCTDVAAWETT 96 (151)
T ss_dssp ETTEEEEEEETTCTHH-----HHHHHSCCEEEEEEETT--EEEEEEEEEEEEECCS
T ss_pred CCCEEEEEECCCcHHH-----HHHHhCCcEEEEEECCC--CEEEEEEEEEEEeCcc
Confidence 5677999999999995 37999999999998663 5799999999887754
No 76
>2hq9_A MLL6688 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, flavoprotein; HET: FAD; 1.95A {Mesorhizobium loti} SCOP: b.45.1.1
Probab=94.76 E-value=0.025 Score=46.72 Aligned_cols=50 Identities=22% Similarity=0.212 Sum_probs=37.7
Q ss_pred CCCCceEeeecCCCccccccchhHhhCCceEEEeecCC---CCceEEEEEEeeEcCHHH
Q psy2497 223 GEDGWYYERLFPQPKQGIQYLHLKAENPQASLAFYWEP---LKRSVRIEGHVEKTSDKE 278 (331)
Q Consensus 223 ~~~gw~f~tl~pS~K~~~~~~~~l~~np~aal~f~W~~---l~RQVri~G~v~~~~~~e 278 (331)
+++...|.+ ..++|. +.|..||+||++|.=+. --+.|.|.|+|+.+++.+
T Consensus 42 ~~~~l~~~t-~~~~k~-----~~l~~~p~V~~~v~~~~~~~~y~sV~v~G~a~~v~d~~ 94 (149)
T 2hq9_A 42 SDAHLYAFS-MPGKKI-----EWMRANPRVSVQVDEHGQGRGWKSVVVDGRYEELPDLI 94 (149)
T ss_dssp ETTEEEEEE-CSSHHH-----HHHHHCCEEEEEEEEECSTTCEEEEEEEEEEEECCSCG
T ss_pred ECCEEEEEe-CccHHH-----HHHhcCCcEEEEEEecCCCCcEEEEEEEEEEEEEcCcc
Confidence 344566777 578885 36999999999997432 237799999999997643
No 77
>3r5z_A Putative uncharacterized protein; split barrel-like fold, DUF385, deazaflavin-dependent reduct F420-dependent reductase, FDR; HET: F42; 1.50A {Nocardia farcinica}
Probab=94.73 E-value=0.078 Score=44.56 Aligned_cols=75 Identities=7% Similarity=0.076 Sum_probs=57.4
Q ss_pred CceEEEEeecC-CCCeeEEEEEEEEeeCCeEEEEecC-----CCcchhhhhcCCcEEEEEEeCCCCeEEEEEEEEEecCC
Q psy2497 52 ANAMFIATSTK-NGIPSGRMVLLKSYGKNGFVFFTNY-----NSRKGNELAENPQASLAFYWEPLKRSVRIEGHVEKTSD 125 (331)
Q Consensus 52 ~~~~~LATvd~-dG~P~~R~V~~r~~~~~gl~F~T~~-----~S~K~~eL~~np~val~f~~~~~~~qvri~G~a~~~~~ 125 (331)
..++.|.|++. .|.|+.-+|.+.. +++++++..+. ++.=+.||.+||.|.|..- . -+..++|+++++
T Consensus 37 ~p~~lLtt~GRkSG~~r~tPl~~~~-~~~~~~vVas~gG~~~~p~W~~Nl~A~p~v~v~~g----~--~~~~~~Ar~~~~ 109 (145)
T 3r5z_A 37 KPVVVLTTKGAKTGKLRKTPLMRVE-HNGEYAVVASLGGAPKHPVWYHNIKAEPHVELRDG----T--EVGDYTAREVTG 109 (145)
T ss_dssp EEEEEEEEECTTTCCEEEEEEECEE-ETTEEEEECCBTTBSSCCHHHHHHHHCCEEEEEET----T--EEEEEEEEECCH
T ss_pred ceEEEEEEcCCCCCCEEEEEEEEEE-ECCEEEEEEcCCCCCCCChHHHHhhhCCcEEEEEC----C--EEEEEEEEECCc
Confidence 35689999986 5999999988764 34566655443 4567899999999999763 1 257788999999
Q ss_pred cchhHHHh
Q psy2497 126 KESDDYFQ 133 (331)
Q Consensus 126 ~~~~~~~~ 133 (331)
+|.++.|.
T Consensus 110 ~Er~~~w~ 117 (145)
T 3r5z_A 110 EEKRVWWE 117 (145)
T ss_dssp HHHHHHHH
T ss_pred hHHHHHHH
Confidence 98888885
No 78
>3tgv_A Heme-binding protein HUTZ; 2.00A {Vibrio cholerae}
Probab=94.73 E-value=0.03 Score=46.73 Aligned_cols=49 Identities=10% Similarity=0.180 Sum_probs=39.8
Q ss_pred CCCCceEeeecCCCccccccchhHhhCCceEEEeecCCC-------CceEEEEEEeeEcCH
Q psy2497 223 GEDGWYYERLFPQPKQGIQYLHLKAENPQASLAFYWEPL-------KRSVRIEGHVEKTSD 276 (331)
Q Consensus 223 ~~~gw~f~tl~pS~K~~~~~~~~l~~np~aal~f~W~~l-------~RQVri~G~v~~~~~ 276 (331)
+++++.|++..-|+|. +.|..||+|||++.-++- ..-|.+.|.|+.+++
T Consensus 38 ~~~~~~~~~s~~~~~~-----~nl~~~prvsl~v~~~~~~~~~~~~~~rltl~G~a~~v~~ 93 (148)
T 3tgv_A 38 NQEGYFVLISHIARHA-----RNLEVNPQVSIMMIEDETEAKQLFARKRLTFDAVASMVER 93 (148)
T ss_dssp ETTEEEEEEETTSHHH-----HHHHHSCEEEEEEECCGGGCSCGGGCCEEEEEEEEEEECT
T ss_pred ECCEEEEEECCccHHH-----HHHHhCCCeEEEEecCcccccCcccceEEEEeeeEEEcCC
Confidence 5677888888889996 379999999999975432 245999999999975
No 79
>3cp3_A Uncharacterized protein; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Corynebacterium diphtheriae nctc 13129ORGANISM_TAXID}
Probab=94.44 E-value=0.045 Score=45.21 Aligned_cols=55 Identities=15% Similarity=0.035 Sum_probs=38.8
Q ss_pred CCceEeeecCCCccccccchhHhhCCceEEEeecC--CCCceEEEEEEeeEcCHHH-HHHHHhc
Q psy2497 225 DGWYYERLFPQPKQGIQYLHLKAENPQASLAFYWE--PLKRSVRIEGHVEKTSDKE-SDDYFQS 285 (331)
Q Consensus 225 ~gw~f~tl~pS~K~~~~~~~~l~~np~aal~f~W~--~l~RQVri~G~v~~~~~~e-s~~yf~~ 285 (331)
+.+.|.+. .++|. . .|..||+||+++.-. .-.+.|+|.|+++.+++.+ -.+.+..
T Consensus 56 ~~lyf~ta-~~~K~-~----~l~~np~V~~~v~~~~~~~~~sV~v~G~a~~v~d~~e~~~~l~~ 113 (148)
T 3cp3_A 56 PRVYFRTA-EGTKL-F----SVNLNSDVLFEVDRFDDAEGWSVVLKGNAYVVRDTEEARHADTL 113 (148)
T ss_dssp CEEEEEEC---CCS-S----CTTSCSEEEEEEEECC--CEEEEEEEEEEEECCCHHHHHHHTTS
T ss_pred CEEEEEcC-CCchH-H----HHhcCCcEEEEEEECCCCCCeEEEEEEEEEEECCHHHHHHHHhc
Confidence 34666776 89995 2 599999999999763 3356899999999998754 5555543
No 80
>3u5w_A Putative uncharacterized protein; ssgcid, seattle structural genomics center for infectious DI FMN-binding protein; 2.05A {Brucella melitensis biovar abortus} SCOP: b.45.1.0 PDB: 3u0i_A
Probab=94.12 E-value=0.07 Score=44.36 Aligned_cols=49 Identities=14% Similarity=0.179 Sum_probs=37.7
Q ss_pred CCCCceEeeecCCCccccccchhHhhCCceEEEee---cCCCCceEEEEEEeeEcCHH
Q psy2497 223 GEDGWYYERLFPQPKQGIQYLHLKAENPQASLAFY---WEPLKRSVRIEGHVEKTSDK 277 (331)
Q Consensus 223 ~~~gw~f~tl~pS~K~~~~~~~~l~~np~aal~f~---W~~l~RQVri~G~v~~~~~~ 277 (331)
+++...|.+ ..++|. +.|..||+||+++. +..--|.|.|.|+|+.+.+.
T Consensus 45 ~~~~ly~~~-~~g~K~-----~~l~~np~V~~~v~~~~~~~~y~sV~v~G~a~~v~d~ 96 (148)
T 3u5w_A 45 SGGSFYSFT-TDGQKT-----NAMRKNDAICILFDQIESQTKWRTVLVQGRYREIARE 96 (148)
T ss_dssp ETTEEEEEE-CCHHHH-----HHHHHCCEEEEEEEEESSSSSEEEEEEEEEEEECCGG
T ss_pred ECCEEEEEE-CCchhH-----HHHhcCCcEEEEEEecCCCCcEEEEEEEEEEEEeCCH
Confidence 345566777 568884 36999999999997 33344789999999999874
No 81
>1xhn_A CREG, cellular repressor of E1A-stimulated genes; beta-barrel, unknown function; HET: MSE; 1.95A {Homo sapiens} SCOP: b.45.1.1
Probab=93.97 E-value=0.12 Score=44.49 Aligned_cols=59 Identities=22% Similarity=0.197 Sum_probs=45.1
Q ss_pred CCceEeeecCCCccccccchhHhhCCceEEEeecCC------------C--CceEEEEEEeeEcCHHH----HHHHHhcC
Q psy2497 225 DGWYYERLFPQPKQGIQYLHLKAENPQASLAFYWEP------------L--KRSVRIEGHVEKTSDKE----SDDYFQSR 286 (331)
Q Consensus 225 ~gw~f~tl~pS~K~~~~~~~~l~~np~aal~f~W~~------------l--~RQVri~G~v~~~~~~e----s~~yf~~R 286 (331)
+...|.+..-++|. +.|..||+|||++.++. - ..-|.+.|+|+.++++| ...|+..-
T Consensus 65 g~~~f~~s~~~~~~-----~nl~~nprvSl~v~~~~~~~~~~~~~dp~~~~~~rvtl~G~a~~v~d~e~~~~~~~~~~~h 139 (184)
T 1xhn_A 65 GVPYFYLSPLQLSV-----SNLQENPYATLTMTLAQTNFCKKHGFDPQSPLCVHIMLSGTVTKVNETEMDIAKHSLFIRH 139 (184)
T ss_dssp SCCEEEECTTSHHH-----HHHHHCCEEEEEEEGGGTTHHHHHTCCTTSTTSCEEEEEEEEEECCGGGHHHHHHHHHHHC
T ss_pred CCEEEEEeCccHhH-----HHHhhCCCEEEEEecCCCccccccCCCCccccCceEEEEEEEEECChHHHHHHHHHHHHHC
Confidence 45777877778885 37999999999999753 1 56799999999999843 34677655
Q ss_pred CC
Q psy2497 287 PY 288 (331)
Q Consensus 287 p~ 288 (331)
|.
T Consensus 140 P~ 141 (184)
T 1xhn_A 140 PE 141 (184)
T ss_dssp GG
T ss_pred cC
Confidence 53
No 82
>2fg9_A 5-nitroimidazole antibiotic resistance protein; STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: FAD; 2.20A {Bacteroides thetaiotaomicron} SCOP: b.45.1.1
Probab=93.33 E-value=0.11 Score=44.40 Aligned_cols=49 Identities=20% Similarity=0.171 Sum_probs=38.5
Q ss_pred CCCceEeeecCCCccccccchhHhhCCceEEEeecCC---------------CCceEEEEEEeeEcCHH
Q psy2497 224 EDGWYYERLFPQPKQGIQYLHLKAENPQASLAFYWEP---------------LKRSVRIEGHVEKTSDK 277 (331)
Q Consensus 224 ~~gw~f~tl~pS~K~~~~~~~~l~~np~aal~f~W~~---------------l~RQVri~G~v~~~~~~ 277 (331)
++...|.+...++|. +.|..||+||++|.=+. -.+.|.|.|+|+.+++.
T Consensus 63 ~~~lyfhta~~~~k~-----~~l~~np~V~~~v~~~~~~is~~~~~~~~~t~~y~sV~v~G~a~~v~d~ 126 (178)
T 2fg9_A 63 NDTLYLHSGPEGGKI-----EMLQRNNNVCITFSLGHKLVYQHKQVACSYSMRSESAMCRGKVEFIEDM 126 (178)
T ss_dssp TTEEEEEECSCSHHH-----HHHHHCCEEEEEEECCCEEEEEC----CEEEEEEEEEEEEEECEEECSH
T ss_pred CCEEEEEcCCcchHH-----HHhhcCCcEEEEEEeCCceeeccCCCCCCCcccEEEEEEEEEEEEECCH
Confidence 345677777788995 36999999999997543 15789999999999775
No 83
>2hti_A BH0577 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, FMN-binding protein; HET: FAD; 2.50A {Bacillus halodurans} SCOP: b.45.1.1
Probab=92.44 E-value=0.18 Score=43.21 Aligned_cols=49 Identities=20% Similarity=0.220 Sum_probs=38.7
Q ss_pred CCCceEeeecCCCccccccchhHhhCCceEEEeecC----C---------CCceEEEEEEeeEcCHH
Q psy2497 224 EDGWYYERLFPQPKQGIQYLHLKAENPQASLAFYWE----P---------LKRSVRIEGHVEKTSDK 277 (331)
Q Consensus 224 ~~gw~f~tl~pS~K~~~~~~~~l~~np~aal~f~W~----~---------l~RQVri~G~v~~~~~~ 277 (331)
++.+.|.+...++|. +.|..||+||++|.=+ . -.+.|.|.|+|+.+++.
T Consensus 49 ~~~ly~hta~~~~k~-----~~l~~np~V~~~v~~~~~~~~~~v~~~~t~~y~sV~v~G~a~~v~d~ 110 (185)
T 2hti_A 49 NHAIYFHGASEGRKI-----KMIEANPEVCFTICEDLGTIVSPVPAHTDTAYMSVIIFGTIEPVSAI 110 (185)
T ss_dssp TTEEEEEEESSSHHH-----HHHHHCCEEEEEEEECC-------------CEEEEEEEEEEEECCCH
T ss_pred CCEEEEEeCCcCHHH-----HHhhcCCeEEEEEEeccccccccccccCcceEEEEEEEEEEEEECCH
Confidence 445677777778995 3699999999999765 3 34789999999999765
No 84
>3dnh_A Uncharacterized protein ATU2129; APC6114, agrobacterium tumefaciens STR. C58 structural genomics, PSI-2, protein structure initiative; 1.94A {Agrobacterium tumefaciens}
Probab=91.76 E-value=0.39 Score=43.67 Aligned_cols=60 Identities=8% Similarity=0.050 Sum_probs=45.5
Q ss_pred CCCceEeeecCCCccccccchhHhhCCceEEEeecCC-----CCceEEEEEEeeEcCHHH----HHHHHhcCCC
Q psy2497 224 EDGWYYERLFPQPKQGIQYLHLKAENPQASLAFYWEP-----LKRSVRIEGHVEKTSDKE----SDDYFQSRPY 288 (331)
Q Consensus 224 ~~gw~f~tl~pS~K~~~~~~~~l~~np~aal~f~W~~-----l~RQVri~G~v~~~~~~e----s~~yf~~Rp~ 288 (331)
++...|++..-+.|. +.|..||+|||++..+. ..+.|.|.|+++.+++++ .+.|+..-|.
T Consensus 66 ~g~~~~~~s~~~~h~-----~NL~~dprvSl~V~~~~~~d~~~~~rvtl~G~a~~v~~~e~~~l~~~y~~rhP~ 134 (258)
T 3dnh_A 66 DGTPFFFAAGLTLHA-----RNMETDARISVTLAPFGKGDALTLPRLTLVGRADRIGPDEVPLAIARYIARYPK 134 (258)
T ss_dssp TSCEEEEEETTSHHH-----HHHHHCCEEEEEECCGGGSCGGGSCEEEEEEEEEECCGGGHHHHHHHHHHHCTT
T ss_pred CCCEEEEEeCCcHHH-----HHHhhCCCEEEEEecCCCCChhhCCeEEEEEEEEEcCchHHHHHHHHHHHHCcC
Confidence 344667777778885 37999999999999775 346799999999999763 4556665564
No 85
>3swj_A CHUZ, putative uncharacterized protein; heme oxygenase, bacterial iron aquisition, heme bindin; HET: HEM; 2.41A {Campylobacter jejuni}
Probab=91.20 E-value=0.37 Score=43.80 Aligned_cols=50 Identities=12% Similarity=0.031 Sum_probs=40.1
Q ss_pred CCCCceEeeecCCCccccccchhHhhCC-ceEEEeecCCC-------CceEEEEEEeeEcCHH
Q psy2497 223 GEDGWYYERLFPQPKQGIQYLHLKAENP-QASLAFYWEPL-------KRSVRIEGHVEKTSDK 277 (331)
Q Consensus 223 ~~~gw~f~tl~pS~K~~~~~~~~l~~np-~aal~f~W~~l-------~RQVri~G~v~~~~~~ 277 (331)
+++...|+...-+.|. +.|..|| +|||+|.-++- .+-|.|.|+|+.++++
T Consensus 122 ~~g~~~~~~s~~a~h~-----~NL~~nP~rvSl~v~e~e~~~~~~~~~~rltl~G~a~~v~~~ 179 (251)
T 3swj_A 122 TQWGNYIYISEVSEHF-----NNIKVNPNNIEIMFLEDESKAASVILRKRLRYRVNASFLERG 179 (251)
T ss_dssp ETTEEEEEEETTSHHH-----HHHHHSTTCEEEEEECCTTTSSCTTCCCEEEEEEEEEECCSS
T ss_pred ECCEEEEEEeCchHHH-----HHHHhCCCeEEEEEEcCcccccCccccceEEEEEEEEEecCh
Confidence 3556778888888885 3799999 99999986542 4679999999999874
No 86
>2vpa_A NIMA-related protein; cofactor, atomic resolution, antibiotic resistance, oxidoreductase; 1.2A {Deinococcus radiodurans} SCOP: b.45.1.1 PDB: 1w3p_A 1w3q_A 1w3r_A* 1w3o_A 2x1k_A 2x1j_A
Probab=90.48 E-value=0.22 Score=44.10 Aligned_cols=49 Identities=14% Similarity=0.053 Sum_probs=37.5
Q ss_pred ceEeeecCCCccccccchhHhhCCceEEEeecCCC-------------CceEEEEEEeeEcCHHHHH
Q psy2497 227 WYYERLFPQPKQGIQYLHLKAENPQASLAFYWEPL-------------KRSVRIEGHVEKTSDKESD 280 (331)
Q Consensus 227 w~f~tl~pS~K~~~~~~~~l~~np~aal~f~W~~l-------------~RQVri~G~v~~~~~~es~ 280 (331)
+.|.+...++|. + .|..||+||++|.-+.- .+.|.|.|+|+.++.++-.
T Consensus 89 Lyfhta~~~~K~-~----~l~~np~V~~~v~~~~~~v~~~~~~~~t~~y~sV~v~G~a~~vd~~e~~ 150 (216)
T 2vpa_A 89 LVYHTNVVGRLR-A----NAGQGHPATLEVSEIGQFLPSNSPLELSVQYRSVMVFGTARVLAGEDAR 150 (216)
T ss_dssp EEEECCCCCSSB-S----SCSSEEEEEEEEEEEEEEECCSSGGGCEEEEEEEEEEEEEEECCHHHHH
T ss_pred EEEEecCcCHHH-H----HhccCCcEEEEEEeCCeeccCccCCCCcccEEEEEEEEEEEEECHHHHH
Confidence 667777779995 2 59999999999965531 4889999999999444443
No 87
>2fur_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.80A {Thermoplasma acidophilum} SCOP: b.45.1.1
Probab=89.81 E-value=0.31 Score=42.77 Aligned_cols=50 Identities=10% Similarity=-0.031 Sum_probs=38.9
Q ss_pred CCCCceEeeecCCCccccccchhHhhCCceEEEeecCC-------------CCceEEEEEEeeEcCHH
Q psy2497 223 GEDGWYYERLFPQPKQGIQYLHLKAENPQASLAFYWEP-------------LKRSVRIEGHVEKTSDK 277 (331)
Q Consensus 223 ~~~gw~f~tl~pS~K~~~~~~~~l~~np~aal~f~W~~-------------l~RQVri~G~v~~~~~~ 277 (331)
+++.+.|.+...++|. +.|..||+||++|.=+. -.+.|.|.|+++.+.++
T Consensus 55 ~~~~lyfhta~~~~k~-----~~l~~np~V~~~v~~~~~~v~~~~~~~~t~~y~sV~v~G~a~~v~d~ 117 (209)
T 2fur_A 55 EGKTIYLHGSMKSRIY-----GILKTGQLIAISLLEINGIVLAKEIKNNSINYVSALIFGRPYEIDDT 117 (209)
T ss_dssp ETTEEEEEEETTSHHH-----HHHHTTCCEEEEEEEEEEEEECSBGGGCEEEEEEEEEEECCEECCCH
T ss_pred ECCEEEEEeCCcCHHH-----HHhhcCCeEEEEEEcCCeeecCCCCCCCccEEEEEEEEEEEEEECCH
Confidence 3455777777778995 36999999999995432 14889999999999775
No 88
>3fkh_A Putative pyridoxamine 5'-phosphate oxidase; NP_601736.1, STR genomics, joint center for structural genomics, JCSG; HET: P33; 2.51A {Corynebacterium glutamicum atcc 13032}
Probab=84.49 E-value=1.6 Score=35.92 Aligned_cols=54 Identities=13% Similarity=-0.115 Sum_probs=31.7
Q ss_pred CCCceEeeecCCCccccccchhHhhCCceEEEeecC--CCCceEEEEEEeeEcCHH-HHHHHH
Q psy2497 224 EDGWYYERLFPQPKQGIQYLHLKAENPQASLAFYWE--PLKRSVRIEGHVEKTSDK-ESDDYF 283 (331)
Q Consensus 224 ~~gw~f~tl~pS~K~~~~~~~~l~~np~aal~f~W~--~l~RQVri~G~v~~~~~~-es~~yf 283 (331)
++...|.+-. ..|- ..|+.||+||++..-. .....|.|.|+++.+.+. |-.+..
T Consensus 45 ~~~iyfh~a~-g~K~-----~~i~~~~~V~f~vd~~~~~~~~SV~v~G~a~~v~d~~e~~~a~ 101 (138)
T 3fkh_A 45 KGAIYIRTAE-GNKL-----FSMNLNHDVLFEADEVKDGKAWSVVVRATAEIVRKLDEIAYAD 101 (138)
T ss_dssp TTEEEEEEEC--------------CCSEEEEEEEEEETTEEEEEEEEEEEEECCSHHHHHHHH
T ss_pred CCEEEEEeCC-ChHH-----HHhhcCCCEEEEEEECCCCCCEEEEEEEEEEEECCHHHHHHHH
Confidence 3445566554 5674 2599999999998732 123389999999999764 444444
No 89
>3gas_A Heme oxygenase; FMN-binding split barrel, oxidoreductase; HET: HEM; 1.80A {Helicobacter pylori}
Probab=62.62 E-value=15 Score=33.19 Aligned_cols=50 Identities=12% Similarity=0.122 Sum_probs=38.5
Q ss_pred CCCCceEeeecCCCccccccchhHhhCC-ceEEEeecCC-------CCceEEEEEEeeEcCHH
Q psy2497 223 GEDGWYYERLFPQPKQGIQYLHLKAENP-QASLAFYWEP-------LKRSVRIEGHVEKTSDK 277 (331)
Q Consensus 223 ~~~gw~f~tl~pS~K~~~~~~~~l~~np-~aal~f~W~~-------l~RQVri~G~v~~~~~~ 277 (331)
+++++.+....-|.|. +.|.+|| +|||.|.=++ ..+=|.+.|+++.++++
T Consensus 122 ~~g~~~iliS~lA~Ht-----~NL~~np~rvSllviede~~~~~~~a~~Rlt~~g~A~~v~~~ 179 (259)
T 3gas_A 122 DGKQYYIYVSEVAEHF-----AGLKNNPHNVEVMFLEDESKAKSAILRKRLRYKTNTRFIERG 179 (259)
T ss_dssp ETTEEEEEEETTSHHH-----HHHHHSTTSEEEEEECCTTTSSBTTBCCEEEEEEEEEEECSS
T ss_pred ECCEEEEEEeCchHHH-----HHHHhCCCeEEEEEEeCccccCChhhcCeEEEEEEEEECCCc
Confidence 3566777777778885 3799999 9999985433 24678999999999873
No 90
>3a6r_A FMN-binding protein; electron transport, flavoprotein; HET: FMN; 1.20A {Desulfovibrio vulgaris} PDB: 1axj_A* 1flm_A* 3awh_A* 3amf_A* 3a6q_A* 1wll_A* 3a20_A* 1wli_A* 1wlk_A* 2e83_A*
Probab=59.05 E-value=5.5 Score=32.15 Aligned_cols=49 Identities=10% Similarity=-0.090 Sum_probs=34.5
Q ss_pred CCCceEeeecCCCccccccchhHhhCCceEEEeecCC------CCceEEEEEEeeEcCHH
Q psy2497 224 EDGWYYERLFPQPKQGIQYLHLKAENPQASLAFYWEP------LKRSVRIEGHVEKTSDK 277 (331)
Q Consensus 224 ~~gw~f~tl~pS~K~~~~~~~~l~~np~aal~f~W~~------l~RQVri~G~v~~~~~~ 277 (331)
|+...+.-++ -.|. + +.|.+||++|++|+=++ .+.=.+|.|+++-+++-
T Consensus 41 D~~ili~~~~-~~kT-~---~Nl~~N~kvai~v~~~e~~g~~g~~~gf~ikGta~~~~~G 95 (122)
T 3a6r_A 41 GNRIVVPVGG-MHKT-E---ANVARDERVLMTLGSRKVAGRNGPGTGFLIRGSAAFRTDG 95 (122)
T ss_dssp TTEEEEEESS-CHHH-H---HHHHHCCEEEEEEEEEEEECSSSEEEEEEEEEEEEEESSS
T ss_pred CCEEEEEccc-cHHH-H---HHHhhCCeEEEEEEecccccccCCCceEEEEEEEEEEecc
Confidence 3444444433 4553 2 47999999999998443 55679999999988763
No 91
>2ptf_A Uncharacterized protein MTH_863; structural genomics, unknown function, PSI-2, protein struct initiative; HET: FMN; 2.35A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: b.45.1.4
Probab=58.27 E-value=19 Score=32.08 Aligned_cols=55 Identities=7% Similarity=0.095 Sum_probs=43.2
Q ss_pred ceEEEEeecCCCCeeEEEEEEEEeeCCeEEEEecCCCcchhhhhcCCcEEEEEEe
Q psy2497 53 NAMFIATSTKNGIPSGRMVLLKSYGKNGFVFFTNYNSRKGNELAENPQASLAFYW 107 (331)
Q Consensus 53 ~~~~LATvd~dG~P~~R~V~~r~~~~~gl~F~T~~~S~K~~eL~~np~val~f~~ 107 (331)
.-.+++|+++||.++.-|+.+...++..+.+.....|.=.++|.+.+.+.+.+-+
T Consensus 36 ~e~vVtT~~~dG~~NlAP~s~~~~~~~~~~i~i~~~k~T~~NI~~tgefVVNi~~ 90 (233)
T 2ptf_A 36 YETIVVTWDDSMVGNAAPIGVLCTGDDTVTLYLYQGTRTVENVLNNGRFTVNVTL 90 (233)
T ss_dssp EEEEEEEECTTCCEEEEEEEEEECSSSEEEEEEETTCHHHHHHHHHSEEEEEECC
T ss_pred EEEEEEEeCCCCCEeeccEEEEEcCCCCEEEEEcCCChHHHHHHhCCEEEEEECC
Confidence 3467999999999999999987543324555555678889999999999998753
No 92
>3in6_A FMN-binding protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, flavoprotein; HET: FMN; 2.12A {Syntrophomonas wolfei subsp}
Probab=54.41 E-value=8.4 Score=32.19 Aligned_cols=37 Identities=14% Similarity=0.082 Sum_probs=25.7
Q ss_pred cCCCccccccchhHhhCCceEEEee---cCCCCceEEEEEEeeE
Q psy2497 233 FPQPKQGIQYLHLKAENPQASLAFY---WEPLKRSVRIEGHVEK 273 (331)
Q Consensus 233 ~pS~K~~~~~~~~l~~np~aal~f~---W~~l~RQVri~G~v~~ 273 (331)
....|.. +-|.+||+||+.|+ =+.-.++.|+.+....
T Consensus 65 ~f~~kT~----~NL~eNP~aav~~~~~~~~~~~KG~Rl~l~~~e 104 (148)
T 3in6_A 65 FGADKTY----ANLKETGKGVFMVLLTDNDKSKDGIRVYVELSA 104 (148)
T ss_dssp SSCHHHH----HHHHHHCEEEEEEEEESSSCEEEEEEEEEEEEE
T ss_pred ccchhHH----HHHHhCCcEEEEEEEcCCCCccceEEEEEEEEE
Confidence 3466763 47999999999998 2333677787775443
No 93
>3b5m_A Uncharacterized protein; structural genomics, unknown function, flavoprotein, PSI-2, structure initiative; 1.21A {Rhodopirellula baltica}
Probab=52.50 E-value=12 Score=32.59 Aligned_cols=52 Identities=13% Similarity=0.061 Sum_probs=42.5
Q ss_pred EEEEeecCCCCeeEEEEEEEEe------eCCeEEEEecCCCcchhhhhcCCcEEEEEE
Q psy2497 55 MFIATSTKNGIPSGRMVLLKSY------GKNGFVFFTNYNSRKGNELAENPQASLAFY 106 (331)
Q Consensus 55 ~~LATvd~dG~P~~R~V~~r~~------~~~gl~F~T~~~S~K~~eL~~np~val~f~ 106 (331)
.+++|.++||.++..|+.+.-. .+..+.|.....|.-..+|.+++..++.+-
T Consensus 7 ~vVTT~~~~G~~N~AP~g~~~~~~~Svs~~P~v~v~i~~~s~T~~Ni~~~g~fvVNi~ 64 (205)
T 3b5m_A 7 SLVTTLDEQGRINLAPLGPIVLPPQSPGGLPQFLLRPYEGSTTCDNLLASGNAVIHVI 64 (205)
T ss_dssp EEEEEECTTCCEEEEEECCEEECCSSTTCCCEEEECCCTTSHHHHHHHHHCEEEEEEC
T ss_pred EEEEEcCCCCCEeecceEEEEeccccccCCCcEEEEECCCCchHHHHHHCCEEEEEEC
Confidence 6799999999999999988632 122566777788999999999999999875
No 94
>2iml_A Hypothetical protein; FMN binding, PSI-2, structural genomics, protein structure initiative; HET: FMN; 1.65A {Archaeoglobus fulgidus} SCOP: b.45.1.4
Probab=44.85 E-value=35 Score=29.50 Aligned_cols=55 Identities=11% Similarity=0.019 Sum_probs=42.3
Q ss_pred CceEEEEeecCCCCeeEEEEEEEEeeCCeEEEEe-cCCCcchhhhhcCCcEEEEEE
Q psy2497 52 ANAMFIATSTKNGIPSGRMVLLKSYGKNGFVFFT-NYNSRKGNELAENPQASLAFY 106 (331)
Q Consensus 52 ~~~~~LATvd~dG~P~~R~V~~r~~~~~gl~F~T-~~~S~K~~eL~~np~val~f~ 106 (331)
...++++|.++||.++.-|+.+...++..+.+.. ...|.=.++|.+.+...+.+-
T Consensus 14 i~ev~VtT~~~~G~~N~AP~s~~~~~~~~~~v~~~~~~k~T~~NI~~~gefVvNi~ 69 (199)
T 2iml_A 14 INEIIAITENEDGSWNAAPIGIIVEDSSSDTAKAKLYRNRTRANLERSGVLFANVT 69 (199)
T ss_dssp EEEEEEEEECTTSCEEEEEEEEEESCTTSSEEEEECCSSHHHHHHHHHCEEEEEEC
T ss_pred eEEEEEEEcCCCCCEEeccEEEEEcCCCCEEEEEcCCCChHHHHHHHCCEEEEEEC
Confidence 4557899999999999999998755441344444 456888899999998888774
No 95
>3r5l_A Deazaflavin-dependent nitroreductase; PA-824, split barrel-like fold, DUF385, deazaflavin-dependen nitroreductase, nitroimidazoles; HET: MES; 1.55A {Mycobacterium tuberculosis} PDB: 3r5p_A 3r5w_A* 3r5r_A*
Probab=38.84 E-value=44 Score=26.68 Aligned_cols=36 Identities=14% Similarity=0.242 Sum_probs=30.1
Q ss_pred hhHhhCCceEEEeecCCCCceEEEEEEeeEcCHHHHHHHHhc
Q psy2497 244 HLKAENPQASLAFYWEPLKRSVRIEGHVEKTSDKESDDYFQS 285 (331)
Q Consensus 244 ~~l~~np~aal~f~W~~l~RQVri~G~v~~~~~~es~~yf~~ 285 (331)
+.|.+||.|.+.+-- -++.++++.++.+|.+..|..
T Consensus 61 ~Nl~A~P~v~v~~~~------~~~~~~A~~l~~~Er~~~~~~ 96 (122)
T 3r5l_A 61 LNLKANPKVQVQIKK------EVLDLTARDATDEERAEYWPQ 96 (122)
T ss_dssp HHHHHCCEEEEEETT------EEEEEEEEECCHHHHHHHHHH
T ss_pred HhhccCCcEEEEECC------EEEEEEEEECCcchHHHHHHH
Confidence 579999999998742 268899999999999999864
No 96
>1eje_A FMN-binding protein; structural genomics, PSI, protein struc initiative; HET: FMN; 2.20A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: b.45.1.2
Probab=35.64 E-value=82 Score=26.47 Aligned_cols=56 Identities=5% Similarity=0.069 Sum_probs=44.0
Q ss_pred ceEEEEeecCCCCeeEEEEEEE-EeeCC--eEEEEecCCCcchhhhhcCCcEEEEEEeC
Q psy2497 53 NAMFIATSTKNGIPSGRMVLLK-SYGKN--GFVFFTNYNSRKGNELAENPQASLAFYWE 108 (331)
Q Consensus 53 ~~~~LATvd~dG~P~~R~V~~r-~~~~~--gl~F~T~~~S~K~~eL~~np~val~f~~~ 108 (331)
.+++++|.+.+|.|+.-|+..- .+..+ -+.|..+..|.-...|.++...++.+...
T Consensus 28 ~V~vVTt~~~~g~~n~~t~s~~~~vs~~Pp~v~v~i~~~~~T~~~i~~~~~F~Vnvl~~ 86 (192)
T 1eje_A 28 PTVMVTTVDEEGNINAAPFSFTMPVSIDPPVVAFASAPDHHTARNIESTHEFVINITPA 86 (192)
T ss_dssp ECEEEEEECTTCCEEEEEECSEEEEETTTTEEEEEECTTSHHHHHHHHHCEEEEEECBG
T ss_pred ceEEEEEECCCCCeEEEEhhccchhcCCCCEEEEEECCchHHHHHHHHCCcEEEEeCCH
Confidence 4567888888999999988743 34443 57888888999999999999999888643
No 97
>3e4v_A NADH:FMN oxidoreductase like protein; YP_544701.1, structural genomics, joint center for structural genom JCSG; HET: MSE FMN; 1.40A {Methylobacillus flagellatus KT}
Probab=32.42 E-value=66 Score=27.00 Aligned_cols=54 Identities=11% Similarity=-0.007 Sum_probs=41.9
Q ss_pred eEEEEeecCCCCeeEEEEEEE-EeeCC--eEEEEecCCCcchhhhhcCCcEEEEEEe
Q psy2497 54 AMFIATSTKNGIPSGRMVLLK-SYGKN--GFVFFTNYNSRKGNELAENPQASLAFYW 107 (331)
Q Consensus 54 ~~~LATvd~dG~P~~R~V~~r-~~~~~--gl~F~T~~~S~K~~eL~~np~val~f~~ 107 (331)
+++++|.+.+|.|+.-|+..- .+..+ -+.|.-+..|.-...|.++...++.+..
T Consensus 20 V~vVTt~~~~g~~n~~t~s~~~~vs~~PPlv~v~i~~~~~t~~~i~~~g~F~Vnvl~ 76 (186)
T 3e4v_A 20 IVLVSTRGADGRANLMTMGFHMMMQHEPPLVGAIIGPWDYSHQALSETGECVLAVPT 76 (186)
T ss_dssp CEEEEEECTTSCEEEEEECCEEEEETTTTEEEEECCTTSTHHHHHHHHCEEEEEECC
T ss_pred eEEEEEeCCCCceEEEEhhhhhhhcCCCCEEEEEEcChhHHHHHHHHCCeEEEEeCC
Confidence 567888799999998887652 23434 4778888888889999999999988864
No 98
>2d5m_A Flavoredoxin; flavoprotein, FMN binding, electron transport; HET: FMN MES; 1.05A {Desulfovibrio vulgaris str}
Probab=31.18 E-value=50 Score=27.69 Aligned_cols=56 Identities=5% Similarity=0.001 Sum_probs=42.5
Q ss_pred ceEEEEeecCCCCeeEEEEEEE-EeeCC--eEEEEecCCCcchhhhhcCCcEEEEEEeC
Q psy2497 53 NAMFIATSTKNGIPSGRMVLLK-SYGKN--GFVFFTNYNSRKGNELAENPQASLAFYWE 108 (331)
Q Consensus 53 ~~~~LATvd~dG~P~~R~V~~r-~~~~~--gl~F~T~~~S~K~~eL~~np~val~f~~~ 108 (331)
.+++++|.+.+|.|+.-|+..- .+..+ -+.|..+..|.=...|.++...++.+...
T Consensus 15 ~V~vVtt~~~~g~~n~~t~s~~~~vs~~Pp~v~v~i~~~~~t~~~i~~~~~f~Vnvl~~ 73 (190)
T 2d5m_A 15 PLFLVGTYDRDSRPNIMAAAWAGICCSQPPSIAVSLRKATYTYRSITERGAFTISIPSR 73 (190)
T ss_dssp ECEEEEEECTTCCEEEEEECSEEEEEETTEEEEECCCTTSHHHHHHHHHSEEEEEECBG
T ss_pred ceEEEEEecCCCceEEEEeeeeecccCCCCEEEEEEcCchhHHHHHHHCCeEEEEeCCH
Confidence 4467888888999999888764 22222 47777788888899999999999888643
No 99
>3bpk_A Nitrilotriacetate monooxygenase component B; structural genomics, APC25244, PSI-2, protein structure initiative; 1.56A {Bacillus cereus atcc 14579}
Probab=31.16 E-value=82 Score=26.79 Aligned_cols=57 Identities=14% Similarity=0.089 Sum_probs=41.3
Q ss_pred ceEEEEeecCCCCeeEEEEEEE-EeeCC--eEEEEecCC----CcchhhhhcCCcEEEEEEeCC
Q psy2497 53 NAMFIATSTKNGIPSGRMVLLK-SYGKN--GFVFFTNYN----SRKGNELAENPQASLAFYWEP 109 (331)
Q Consensus 53 ~~~~LATvd~dG~P~~R~V~~r-~~~~~--gl~F~T~~~----S~K~~eL~~np~val~f~~~~ 109 (331)
.+++++|.+.+|.|+.-|+..- .+..+ -+.|..+.. |.-..+|.++...++.+...+
T Consensus 29 pV~vVtt~~~~g~~n~~t~s~~~~vs~~Pp~v~v~i~~~~~~~~~T~~~i~~~~~F~Vnil~~~ 92 (206)
T 3bpk_A 29 PVAFVTSVTKEGVLNGAPYSYFNIVAANPPLISVSVQRKAGERKDTSRNAIEKGEFVVHISDES 92 (206)
T ss_dssp ECEEEEEECTTCCEEEEEESSEEEEETTTTEEEEEEECBTTBCCHHHHHHHHHSEEEEEECBTT
T ss_pred ccEEEEEeCCCCCEEEEEeeeeecccCCCCEEEEEEcCCCCChhHHHHHHHHCCeEEEEeCCHH
Confidence 4578888888999999888442 23333 466666655 777889999999999886543
No 100
>2nr4_A Conserved hypothetical protein; structural genomics, unknown function, flavoprotein, PSI-2, protein structure initiative; HET: FMN; 1.85A {Methanosarcina mazei} SCOP: b.45.1.4
Probab=30.39 E-value=66 Score=27.96 Aligned_cols=50 Identities=8% Similarity=-0.072 Sum_probs=42.2
Q ss_pred EEEEeecCCCCeeEEEEEEEEeeCCeEEEEecCCCcchhhhhcCCcEEEEEE
Q psy2497 55 MFIATSTKNGIPSGRMVLLKSYGKNGFVFFTNYNSRKGNELAENPQASLAFY 106 (331)
Q Consensus 55 ~~LATvd~dG~P~~R~V~~r~~~~~gl~F~T~~~S~K~~eL~~np~val~f~ 106 (331)
.+|+|.+.+ .++.-|+.+.. .++.+.+.....|.=+.+|.+++.+.+.|-
T Consensus 32 ~vI~Tt~~~-~~N~APiG~~~-~~~~v~i~~~~~s~T~eNI~~~~~fvvNv~ 81 (213)
T 2nr4_A 32 EIIASTGFE-HPNAAPIGIVM-KGERPFVRLFKGSHTWENVLKEKCLASNVV 81 (213)
T ss_dssp EEEEEECSS-SCEEEEEEEEE-SSSSCEEEEETTSHHHHHHHHHCEEEEECC
T ss_pred EEEEEecCC-CccccceEEEE-eCCEEEEEECCCCchHHHHhhCCEEEEEeC
Confidence 456677888 99999998874 345688888889999999999999999886
No 101
>3fge_A Putative flavin reductase with split barrel domai; YP_750721.1; 1.74A {Shewanella frigidimarina ncimb 400}
Probab=26.08 E-value=75 Score=27.06 Aligned_cols=57 Identities=12% Similarity=0.077 Sum_probs=40.4
Q ss_pred ceEEEEeecCCCCeeEEEEEE-EEeeCC--eEEEEecC---CCcchhhhhcCCcEEEEEEeCC
Q psy2497 53 NAMFIATSTKNGIPSGRMVLL-KSYGKN--GFVFFTNY---NSRKGNELAENPQASLAFYWEP 109 (331)
Q Consensus 53 ~~~~LATvd~dG~P~~R~V~~-r~~~~~--gl~F~T~~---~S~K~~eL~~np~val~f~~~~ 109 (331)
.+++++|.+++|.++.-|+.. -.+..+ -+.|..+. .+.-..+|.++...+|.+...+
T Consensus 29 pV~vVtt~~~~G~~n~~t~s~~~~vs~~PPlv~v~i~~~~~~~~T~~~i~~~g~F~Vnvl~~~ 91 (203)
T 3fge_A 29 SANLIGTQDRQGNTNLSIVSSVIHLGANPPLMGMIIRPHSVPRHTFENIMQTGLYTINHVNQS 91 (203)
T ss_dssp ECEEEEEECTTCCEEEEEESCCEEEEETTEEEEEEECC---CHHHHHHHHHHCEEEEEECBTT
T ss_pred ccEEEEEeCCCCceeEEEeeeeehhcCCCCEEEEEeCCCCCccHHHHHHHHCCcEEEEECCHH
Confidence 356888889999999888754 223333 35666666 6667788999999999886443
No 102
>3r5y_A Putative uncharacterized protein; PA-824, nitroimidazoles, split barrel-like fold, DUF385, DEA dependent nitroreductase, unknown function; HET: F42; 1.80A {Nocardia farcinica}
Probab=21.56 E-value=1.3e+02 Score=24.80 Aligned_cols=37 Identities=14% Similarity=0.213 Sum_probs=30.2
Q ss_pred chhHhhCCceEEEeecCCCCceEEEEEEeeEcCHHHHHHHHhc
Q psy2497 243 LHLKAENPQASLAFYWEPLKRSVRIEGHVEKTSDKESDDYFQS 285 (331)
Q Consensus 243 ~~~l~~np~aal~f~W~~l~RQVri~G~v~~~~~~es~~yf~~ 285 (331)
.+.|.+||.|.+.+ +.. +..++++.++++|.+..|..
T Consensus 84 ~~Nl~A~p~v~v~~-----g~~-~~~~~Ar~~~~~Er~~~w~~ 120 (147)
T 3r5y_A 84 YFNLVADPRAQLRD-----KDA-VLSVVARELAGPERAEWWER 120 (147)
T ss_dssp HHHHHHCCEEEEEE-----TTE-EEEEEEEECCHHHHHHHHHH
T ss_pred HHhhhhCCcEEEEE-----CCE-EEEEEEEECCchHHHHHHHH
Confidence 35799999999975 222 67888999999999999963
Done!