Query psy2511
Match_columns 80
No_of_seqs 115 out of 303
Neff 5.6
Searched_HMMs 29240
Date Fri Aug 16 18:04:51 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy2511.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/2511hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3aih_A Protein OS-9; beta barr 99.9 6.9E-26 2.4E-30 148.7 7.0 80 1-80 20-122 (124)
2 1gp0_A Cation-independent mann 99.6 6.4E-16 2.2E-20 102.2 6.7 69 12-80 62-138 (143)
3 2rl8_A Cation-dependent mannos 99.6 4E-15 1.4E-19 101.4 6.9 77 4-80 64-152 (154)
4 2kva_A Cation-independent mann 99.6 2.7E-14 9.3E-19 94.2 9.5 74 4-80 65-146 (148)
5 2lla_A Mannose-6-phosphate/ins 99.1 9.5E-10 3.3E-14 71.6 8.4 67 14-80 61-135 (140)
6 2l21_A Cation-independent mann 99.0 4.3E-09 1.5E-13 70.6 8.6 68 13-80 66-141 (154)
7 2l2g_A IGF2R domain 11; insuli 98.9 4.1E-09 1.4E-13 70.6 7.7 68 13-80 63-138 (151)
8 1q25_A CI, cation-independent 98.8 1.6E-08 5.3E-13 76.8 7.2 76 4-80 346-430 (432)
9 2v5o_A Cation-independent mann 98.5 3.5E-07 1.2E-11 72.5 7.4 67 12-80 62-138 (627)
10 1q25_A CI, cation-independent 98.3 1.4E-06 4.9E-11 66.0 6.6 65 14-80 204-279 (432)
11 2v5o_A Cation-independent mann 98.2 2.8E-06 9.7E-11 67.3 7.7 67 14-80 547-617 (627)
12 3hyi_A Protein DUF199/WHIA; la 26.7 22 0.00074 25.9 1.1 16 62-78 124-139 (295)
No 1
>3aih_A Protein OS-9; beta barrel, lectin, sugar binding protein; HET: BMA MAN; 2.10A {Homo sapiens}
Probab=99.92 E-value=6.9e-26 Score=148.67 Aligned_cols=80 Identities=28% Similarity=0.501 Sum_probs=69.1
Q ss_pred CCceEeecC----CCCCceeeeeecc---ccCC----------CCeEEEEeCCCccC-CCCCCceEEEEEEcCC-----C
Q psy2511 1 MNKTSQRPK----NGGAETKLGNWGK---WLED----------SNYSVMFYDRGHTC-WNGPQRTTHVRIKCGL-----E 57 (80)
Q Consensus 1 f~~~~Q~~~----~g~~~~~LG~~~~---w~~~----------~~~~~~~y~~G~~C-wnG~~Rst~V~l~Cg~-----~ 57 (80)
++.+.|... .++..++||+|++ |+.. .+|.+|.|++|+.| |||++|+++|.|.|++ +
T Consensus 20 ~k~v~Q~h~~~~~~~~~~~~LG~~~~~~~~~~~~~~~~~~~~~~~y~~~~y~~G~~Cd~~g~~Rst~V~~~C~~~~~~~~ 99 (124)
T 3aih_A 20 GRHIQQYHMEDSEIKGEVLYLGYYQSAFDWDDETAKASKQHRLKRYHSQTYGNGSKCDLNGRPREAEVRFLCDEGAGISG 99 (124)
T ss_dssp TTEEEEECEETTEECSCCEEEEEEEEEEEEEC-----------CEEEEEEEECCSBCTTTSCBCEEEEEEEECTTCCSSC
T ss_pred CCeEEEecccCCCCCCCEEECccccccccccccccccccccccceeEEEEcCCCCccCCCCCCcEEEEEEEeCCCCCCCc
Confidence 456788532 2456789999999 8651 36899999999999 9999999999999997 6
Q ss_pred CcEEEecCCCCcEEEEEEecccC
Q psy2511 58 NELISVTEPNRCEYLFEFLTPAA 80 (80)
Q Consensus 58 ~~l~sv~Eps~C~Y~~~~~TP~a 80 (80)
+.|++|.||++|+|.|+|.||++
T Consensus 100 ~~i~~v~E~~~C~Y~~~v~tP~~ 122 (124)
T 3aih_A 100 DYIDRVDEPLSCSYVLTIRTPRL 122 (124)
T ss_dssp CEEEEEEEEETTEEEEEEEEGGG
T ss_pred cEEEEEcCCCceEEEEEEEeccc
Confidence 89999999999999999999986
No 2
>1gp0_A Cation-independent mannose-6-phosphate receptor; insulin-like growth factor, transport, beta barrel; 1.4A {Homo sapiens} SCOP: b.64.1.1 PDB: 1e6f_A 1gp3_A 1gqb_A 2cnj_D 2l29_A 2l2a_A
Probab=99.62 E-value=6.4e-16 Score=102.25 Aligned_cols=69 Identities=22% Similarity=0.405 Sum_probs=60.4
Q ss_pred CCceeeeeeccccC-CCCeEEEEeCCCccCCC--CCCceEEEEEEcCCC----CcEEEecCC-CCcEEEEEEecccC
Q psy2511 12 GAETKLGNWGKWLE-DSNYSVMFYDRGHTCWN--GPQRTTHVRIKCGLE----NELISVTEP-NRCEYLFEFLTPAA 80 (80)
Q Consensus 12 ~~~~~LG~~~~w~~-~~~~~~~~y~~G~~Cwn--G~~Rst~V~l~Cg~~----~~l~sv~Ep-s~C~Y~~~~~TP~a 80 (80)
+..++||.|..|-. .+++..|.|++|+.||+ |++|++.|.|.|+++ ..++.|.|+ ..|.|.|++.||+|
T Consensus 62 ~~~~slG~~~~~~~~~~~~l~L~Y~~G~~C~~~~g~~rst~I~f~C~~~~~~~~~~~~v~~~~~~C~Y~f~~~T~~A 138 (143)
T 1gp0_A 62 QTRISVGKANKRLRYVDQVLQLVYKDGSPCPSKSGLSYKSVISFVCRPEAGPTNRPMLISLDKQTCTLFFSWHTPLA 138 (143)
T ss_dssp TTCCBSCBCCCCCEEETTEEEEEECCCSBCSSSTTCBCEEEEEEEECSSCCSSCCCEEEEEETTTTEEEEEEEEGGG
T ss_pred CCcEEcccccceEEEECCEEEEEECCCCcCCCCCCceeEEEEEEEeCCCCCCCCCCEEeecCCCCcEEEEEEeeccc
Confidence 45689999998755 45789999999999996 899999999999986 567899986 68999999999987
No 3
>2rl8_A Cation-dependent mannose-6-phosphate receptor; P-type lectin, lectin, glycop lysosome, membrane, transmembrane, transport; HET: NAG M6D; 1.45A {Bos taurus} SCOP: b.64.1.1 PDB: 1keo_A* 2rl7_A* 2rl6_A* 2rl9_A* 2rlb_A* 3cy4_A* 3k41_A* 3k43_A* 3k42_A* 1m6p_A* 1c39_A*
Probab=99.57 E-value=4e-15 Score=101.44 Aligned_cols=77 Identities=30% Similarity=0.457 Sum_probs=63.8
Q ss_pred eEeecCCCCCceeeeeeccccC--CCCeEEEEeCCCcc---CCCCCCceEEEEEEcCCCC---cEEEecCC----CCcEE
Q psy2511 4 TSQRPKNGGAETKLGNWGKWLE--DSNYSVMFYDRGHT---CWNGPQRTTHVRIKCGLEN---ELISVTEP----NRCEY 71 (80)
Q Consensus 4 ~~Q~~~~g~~~~~LG~~~~w~~--~~~~~~~~y~~G~~---CwnG~~Rst~V~l~Cg~~~---~l~sv~Ep----s~C~Y 71 (80)
|.|..+++....+||.|..+.. +.....|.|++|++ ||++++|++.|.|.|+.+. .+..|.|| +.|.|
T Consensus 64 ~cQ~~~~~~~~~~iG~~~~~~~~~g~d~i~L~Y~~G~~~~s~c~~~~Rst~I~f~Cd~~~~~~~~~~v~E~~~~~~~C~Y 143 (154)
T 2rl8_A 64 LVQIQKSNGKETVVGRFNETQIFQGSNWIMLIYKGGDEYDNHCGREQRRAVVMISCNRHTLADNFNPVSEERGKVQDCFY 143 (154)
T ss_dssp EEEEETTTCCEEEEEEEEEEEEEECSSEEEEEEEECCBCSSSGGGCBCCEEEEEEECTTCSSEEEEEEEEECCSSSCCEE
T ss_pred EEEEecCCCceEEeeeccceEEEcCCceEEEEECCCcccccccCCCcceEEEEEEeCCCCCCCccEEEecccCccCceEE
Confidence 7888877766778999999754 22256789999999 6899999999999999875 55566655 99999
Q ss_pred EEEEecccC
Q psy2511 72 LFEFLTPAA 80 (80)
Q Consensus 72 ~~~~~TP~a 80 (80)
.|++.||+|
T Consensus 144 ~F~~~T~~A 152 (154)
T 2rl8_A 144 LFEMDSSLA 152 (154)
T ss_dssp EEEEEEGGG
T ss_pred EEEEecCcc
Confidence 999999987
No 4
>2kva_A Cation-independent mannose-6-phosphate receptor; transport, lysosome, sugar binding, glyco membrane, phosphoprotein, transmembrane, disulfide bond; NMR {Bos taurus} PDB: 2kvb_A
Probab=99.56 E-value=2.7e-14 Score=94.15 Aligned_cols=74 Identities=19% Similarity=0.251 Sum_probs=61.5
Q ss_pred eEeecCCCCCceeeeeecc---ccCCCCeEEEEeCCCccCCCCC--CceEEEEEEcCCCCc---EEEecCCCCcEEEEEE
Q psy2511 4 TSQRPKNGGAETKLGNWGK---WLEDSNYSVMFYDRGHTCWNGP--QRTTHVRIKCGLENE---LISVTEPNRCEYLFEF 75 (80)
Q Consensus 4 ~~Q~~~~g~~~~~LG~~~~---w~~~~~~~~~~y~~G~~CwnG~--~Rst~V~l~Cg~~~~---l~sv~Eps~C~Y~~~~ 75 (80)
|-|.++.++...+||.+.. | .++...|.|.+|++||||+ +||+.|.|.|+++.. ...+.| ..|.|.|++
T Consensus 65 ~Cq~~~~~~~~~~lG~~~~~~~~--~~~~l~l~Y~~G~~C~~~~~~~rst~I~f~Cd~~~~~~~p~~~~~-~~C~Y~f~~ 141 (148)
T 2kva_A 65 ACQVSRSDRKSWNLGRSNAKLSY--YDGMIQLTYRDGTPYNNEKRTPRATLITFLCDRDAGVGFPEYQEE-DNSTYNFRW 141 (148)
T ss_dssp EEEEESSSCCEEEEEECBCCEEE--ETTEEEEEEBCCCCCSCTTCCCCEEEEEEECCSSCSSCCEEECSC-CSSEEEEEE
T ss_pred EEEEcCCCCceEEeeecCCCcEE--cCCeEEEEECCCCcCCCCCCceeEEEEEEEeCCCCCCCCCEEeec-CCCEEEEEE
Confidence 3477776667889999876 5 3578999999999999987 699999999998743 456766 899999999
Q ss_pred ecccC
Q psy2511 76 LTPAA 80 (80)
Q Consensus 76 ~TP~a 80 (80)
.||+|
T Consensus 142 ~T~~A 146 (148)
T 2kva_A 142 YTSYA 146 (148)
T ss_dssp ECGGG
T ss_pred ecccc
Confidence 99987
No 5
>2lla_A Mannose-6-phosphate/insulin-like growth factor II; monotreme, IGF-II, domain 11, transport; NMR {Tachyglossus aculeatus}
Probab=99.05 E-value=9.5e-10 Score=71.61 Aligned_cols=67 Identities=19% Similarity=0.455 Sum_probs=51.8
Q ss_pred ceeeeeeccccC-CCCeEEEEeCCCccCCCC--CCceEEEEEEcCCC----Cc-EEEecCCCCcEEEEEEecccC
Q psy2511 14 ETKLGNWGKWLE-DSNYSVMFYDRGHTCWNG--PQRTTHVRIKCGLE----NE-LISVTEPNRCEYLFEFLTPAA 80 (80)
Q Consensus 14 ~~~LG~~~~w~~-~~~~~~~~y~~G~~CwnG--~~Rst~V~l~Cg~~----~~-l~sv~Eps~C~Y~~~~~TP~a 80 (80)
..+||....=-. .+....|.|.+|+.|.++ .+|++.|.|.|.++ .. ++...|...|.|.|++.||+|
T Consensus 61 ~~~~G~~~~~~~~~~~~l~L~Y~~G~~C~~~~~~~~st~I~F~C~~~~~~~~~p~~~~~~~~~C~y~F~w~T~~A 135 (140)
T 2lla_A 61 GIKAGKWNQKLSYVDQVLQLVYEDGDPCPANLHLKYKSVISFVCKSDAGPTSQPLLLSVDEHTCTLFFSWHTSLA 135 (140)
T ss_dssp TEEEEECCCCEEEETTEEEEEEBCCCBCTTTSSCBCEEEEEEEECTTTTTSCEEEEEEECTTTCEEEEEEEEGGG
T ss_pred CcccceeccccEEeCCEEEEEEcCCCcCCCCCCceeEEEEEEEcCCCCCCCCCceEEeccCCCCEEEEEEeeCcc
Confidence 578998754111 356789999999999876 47999999999763 12 344467889999999999987
No 6
>2l21_A Cation-independent mannose-6-phosphate receptor; genomic imprinting, insulin-like growth factor 2, mannose 6 receptor, protein evolution; NMR {Gallus gallus}
Probab=98.95 E-value=4.3e-09 Score=70.57 Aligned_cols=68 Identities=16% Similarity=0.305 Sum_probs=53.2
Q ss_pred CceeeeeeccccC-CCCeEEEEeCCCccCC--CCCCceEEEEEEcCCC----CcEEEecC-CCCcEEEEEEecccC
Q psy2511 13 AETKLGNWGKWLE-DSNYSVMFYDRGHTCW--NGPQRTTHVRIKCGLE----NELISVTE-PNRCEYLFEFLTPAA 80 (80)
Q Consensus 13 ~~~~LG~~~~w~~-~~~~~~~~y~~G~~Cw--nG~~Rst~V~l~Cg~~----~~l~sv~E-ps~C~Y~~~~~TP~a 80 (80)
...+||..+.=-. .++...|.|.+|+.|. ++.+|++.|.|.|.++ ..+.-|.| ...|.|.|++.||+|
T Consensus 66 ~~~slG~~~~~l~~~~~~l~L~Y~~Gs~C~~~~~~~rsT~I~F~Cd~~~~~~~~p~~v~~~~d~C~Y~F~w~T~~A 141 (154)
T 2l21_A 66 KTLNAGKLSKTLTYEDQVLKLVYEDGDPCPTDLKMKHKSYFSFVCKSDAGDDSQPVFLSFDEQTCTSYFSWHTSLA 141 (154)
T ss_dssp EEEEEEECCCCCEEETTEEEEEEECCCCCSSCSSSCCEEEEEEECCSSCTTTTCEEEEEEETTTTEEEEEEECTTT
T ss_pred CeEEcccccceEEEeCCEEEEEECCCCcCCCCCCCEEEEEEEEEECCCCCCCCceEEEEECCCCeEEEEEEecccc
Confidence 4578998764111 3567899999999995 4679999999999765 24566664 678999999999987
No 7
>2l2g_A IGF2R domain 11; insulin-like growth factor 2, mannose 6 phosphate receptor, imprinting, protein evolution, signaling protein; NMR {Monodelphis domestica}
Probab=98.92 E-value=4.1e-09 Score=70.61 Aligned_cols=68 Identities=22% Similarity=0.451 Sum_probs=53.5
Q ss_pred CceeeeeeccccC-CCCeEEEEeCCCccCCC--CCCceEEEEEEcCCC----CcEEEecC-CCCcEEEEEEecccC
Q psy2511 13 AETKLGNWGKWLE-DSNYSVMFYDRGHTCWN--GPQRTTHVRIKCGLE----NELISVTE-PNRCEYLFEFLTPAA 80 (80)
Q Consensus 13 ~~~~LG~~~~w~~-~~~~~~~~y~~G~~Cwn--G~~Rst~V~l~Cg~~----~~l~sv~E-ps~C~Y~~~~~TP~a 80 (80)
...+||..+.=-. .+....|.|++|+.|.+ +.+|++.|.|.|.++ ..+.-|.| ...|.|.|++.||+|
T Consensus 63 ~~~s~G~~~~~l~~~~~~l~L~Y~~Gs~C~~~~~~~rst~I~F~Cd~~~~~~~~p~~v~~~~~~C~Y~F~w~T~~A 138 (151)
T 2l2g_A 63 TKINAGSWNSQLMYVDQVLQLVYDDGAPCPSKNALKYKSVISFVCTHDSGANNKPVFVSLDKQTCTLYFSWHTPLA 138 (151)
T ss_dssp SCCEEEECCCCEEEETTEEEEEECSCSBCCSSSSSBCEEEEEEEECSSSSCCCCEEEEEEETTTTEEEEEEEEGGG
T ss_pred CceEeeecccceEEECCEEEEEECCCCCCCCCCCceeEEEEEEEECCCCCCCCCcEEEEecCCceEEEEEEechhc
Confidence 3568898754111 35678999999999964 568999999999864 35677888 677999999999986
No 8
>1q25_A CI, cation-independent mannose 6-phosphate receptor, MAN-6-P receptor, CI-MPR; P-lectin, protein transport,S binding protein; HET: MAN BMA NAG; 1.80A {Bos taurus} SCOP: b.64.1.1 b.64.1.1 b.64.1.1 PDB: 1syo_A* 1sz0_A*
Probab=98.77 E-value=1.6e-08 Score=76.77 Aligned_cols=76 Identities=21% Similarity=0.289 Sum_probs=57.2
Q ss_pred eEeecCCCC-Cceeeeeec--cccCCCCeEEEEeCCCccCCCCCCceEEEEEEcCCCC------cEEEecCCCCcEEEEE
Q psy2511 4 TSQRPKNGG-AETKLGNWG--KWLEDSNYSVMFYDRGHTCWNGPQRTTHVRIKCGLEN------ELISVTEPNRCEYLFE 74 (80)
Q Consensus 4 ~~Q~~~~g~-~~~~LG~~~--~w~~~~~~~~~~y~~G~~CwnG~~Rst~V~l~Cg~~~------~l~sv~Eps~C~Y~~~ 74 (80)
|-|..+.+. ...+||.++ .+.-.++-..|.|.+|+.|.+|.+|++.|.|.|.++. .++.+.|. .|.|.|+
T Consensus 346 ~cq~~~~~~~~~~~~G~~~~~~~~~~~~~l~L~Y~~G~~C~~~~~rst~I~f~Cd~~~~~~~~~~p~~~~e~-~C~Y~f~ 424 (432)
T 1q25_A 346 VCQVKKADSTQVKVAGRPQNLTLRYSDGDLTLIYFGGEECSSGFQRMSVINFECNQTAGNNGRGAPVFTGEV-DCTYFFT 424 (432)
T ss_dssp EEEEETTCTTCEEECCCTTSEEEEEETTEEEEEECCCCBCTTSCBCEEEEEEEECTTCTTTTTCCCEEEEEE-TTEEEEE
T ss_pred EEEEEeCCCCceEEeeEecccCEEEeCCeEEEEECCCCcCCCCCeeEEEEEEEeCCCCCcCCCCccEEEeeC-ceEEEEE
Confidence 445544332 245688763 2211345689999999999999999999999998753 36777787 8999999
Q ss_pred EecccC
Q psy2511 75 FLTPAA 80 (80)
Q Consensus 75 ~~TP~a 80 (80)
+.|++|
T Consensus 425 ~~T~~A 430 (432)
T 1q25_A 425 WDTKYA 430 (432)
T ss_dssp EEEGGG
T ss_pred EeeeEe
Confidence 999986
No 9
>2v5o_A Cation-independent mannose-6-phosphate receptor; membrane, lysosome, transport, beta barrel, phosphorylation, fibronec II; HET: NAG; 2.91A {Homo sapiens} PDB: 2v5p_A* 2v5n_A*
Probab=98.47 E-value=3.5e-07 Score=72.52 Aligned_cols=67 Identities=21% Similarity=0.424 Sum_probs=54.5
Q ss_pred CCceeeeeecc---ccCCCCeEEEEeCCCccCC--CCCCceEEEEEEcCCC----CcEEEecC-CCCcEEEEEEecccC
Q psy2511 12 GAETKLGNWGK---WLEDSNYSVMFYDRGHTCW--NGPQRTTHVRIKCGLE----NELISVTE-PNRCEYLFEFLTPAA 80 (80)
Q Consensus 12 ~~~~~LG~~~~---w~~~~~~~~~~y~~G~~Cw--nG~~Rst~V~l~Cg~~----~~l~sv~E-ps~C~Y~~~~~TP~a 80 (80)
+..++||..+. | .++...|.|.+|+.|. +|..|++.|.|.|..+ ..++-|.| +..|.|.|.+.||+|
T Consensus 62 ~~~~slG~~~~~l~~--~~~~l~L~Y~~G~~C~~~~~~~~sT~I~f~Cd~~~~~~~~p~~v~~~~~~C~y~f~w~T~~A 138 (627)
T 2v5o_A 62 QTRISVGKANKRLRY--VDQVLQLVYKDGSPCPSKSGLSYKSVISFVCRPEAGPTNRPMLISLDKQTCTLFFSWHTPLA 138 (627)
T ss_dssp TTCCEEEBCCCCEEE--ETTEEEEEEBSCSBCSSSTTCBCEEEEEEEECSSCCTTCSCEEEEEETTTTEEEEEEEEGGG
T ss_pred CccEecccccceeEE--ECCEEEEEECCCCcCCCCCCceEEEEEEEEeCCCCCcCCcceEeeecCCCcEEEEEEecHHh
Confidence 34678998654 3 3567889999999996 5789999999999864 35677777 789999999999987
No 10
>1q25_A CI, cation-independent mannose 6-phosphate receptor, MAN-6-P receptor, CI-MPR; P-lectin, protein transport,S binding protein; HET: MAN BMA NAG; 1.80A {Bos taurus} SCOP: b.64.1.1 b.64.1.1 b.64.1.1 PDB: 1syo_A* 1sz0_A*
Probab=98.29 E-value=1.4e-06 Score=65.98 Aligned_cols=65 Identities=18% Similarity=0.382 Sum_probs=50.7
Q ss_pred ceeeeeecc---ccCCCCeEEEEeCCCc-----cCCCCCCceEEEEEEcCCCCc---EEEecCCCCcEEEEEEecccC
Q psy2511 14 ETKLGNWGK---WLEDSNYSVMFYDRGH-----TCWNGPQRTTHVRIKCGLENE---LISVTEPNRCEYLFEFLTPAA 80 (80)
Q Consensus 14 ~~~LG~~~~---w~~~~~~~~~~y~~G~-----~CwnG~~Rst~V~l~Cg~~~~---l~sv~Eps~C~Y~~~~~TP~a 80 (80)
..+||..+. +. .++...|.|.+|+ .| ++..|++.|.|.|.++.. +..+.|.+.|.|.|++.||+|
T Consensus 204 ~~~lG~~~~~~~~~-~~~~l~L~Y~~g~~~~~~~C-~~~~~st~I~f~C~~~~~~~~~~~~~~~~~C~Y~fe~~T~~A 279 (432)
T 1q25_A 204 AFDVGRPQEGLKLV-SNDRLVLSYVKEGAGQPDFC-DGHSPAVTITFVCPSERREGTIPKLTAKSNCRFEIEWVTEYA 279 (432)
T ss_dssp EEEEEEECSCCEEE-ETTEEEEEEECCSSCCCCTT-SSCCCEEEEEEECCSSCCCCCCCEEEEESSSEEEEEEECGGG
T ss_pred eEEecccCCCceEc-CCCcEEEEEcCCCcCCCCcC-CCcccEEEEEEEcCCCCCCCCCceEEecCCCEEEEEEeeccc
Confidence 568998776 22 2567899999994 55 567899999999987533 455567889999999999987
No 11
>2v5o_A Cation-independent mannose-6-phosphate receptor; membrane, lysosome, transport, beta barrel, phosphorylation, fibronec II; HET: NAG; 2.91A {Homo sapiens} PDB: 2v5p_A* 2v5n_A*
Probab=98.25 E-value=2.8e-06 Score=67.33 Aligned_cols=67 Identities=18% Similarity=0.280 Sum_probs=51.7
Q ss_pred ceeeeeecc--ccCCCCeEEEEeCCCccCCCCCCceEEEEEEcCCCCc--EEEecCCCCcEEEEEEecccC
Q psy2511 14 ETKLGNWGK--WLEDSNYSVMFYDRGHTCWNGPQRTTHVRIKCGLENE--LISVTEPNRCEYLFEFLTPAA 80 (80)
Q Consensus 14 ~~~LG~~~~--w~~~~~~~~~~y~~G~~CwnG~~Rst~V~l~Cg~~~~--l~sv~Eps~C~Y~~~~~TP~a 80 (80)
..+||.-.. +...+....|.|.+|+.|.++..|++.|.|.|++.-. .+...|...|+|.|...|.+|
T Consensus 547 ~~~lG~~~~~~~~~~~~~v~l~Y~~G~~C~~~~~~st~I~f~C~~~~g~P~~~~~~~~~C~y~f~W~T~~A 617 (627)
T 2v5o_A 547 VQVLGLVHTQKLGVIGDKVVVTYSKGYPCGGNKTASSVIELTCTKTVGRPAFKRFDIDSCTYYFSWDSRAA 617 (627)
T ss_dssp EEEEEEGGGCEEEEETTEEEEEECCCSBCSTTCBCEEEEEEEECSSEEEEEEEEEETTTTEEEEEEEEGGG
T ss_pred eeeccccccCcEEEECCEEEEEECCCCcCCCCCcceEEEEEEeCCCCCCcEEEEecCCCCEEEEEeCChhh
Confidence 478888764 2223456899999999998888899999999986311 233456678999999999986
No 12
>3hyi_A Protein DUF199/WHIA; laglidadg, homing endonuclease, helix-turn-helix, HTH, trans regulator; 2.34A {Thermotoga maritima} PDB: 3hyj_A
Probab=26.72 E-value=22 Score=25.86 Aligned_cols=16 Identities=31% Similarity=0.378 Sum_probs=14.9
Q ss_pred EecCCCCcEEEEEEecc
Q psy2511 62 SVTEPNRCEYLFEFLTP 78 (80)
Q Consensus 62 sv~Eps~C~Y~~~~~TP 78 (80)
||.+|++ .|++++.+|
T Consensus 124 Sv~dP~~-~YHLEi~~~ 139 (295)
T 3hyi_A 124 SMTNPRY-HYHLEINLF 139 (295)
T ss_dssp EECCTTT-CCCEEEEES
T ss_pred ecCCCCC-ceeEEEeeC
Confidence 9999998 999999887
Done!