BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy2512
(115 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P14314|GLU2B_HUMAN Glucosidase 2 subunit beta OS=Homo sapiens GN=PRKCSH PE=1 SV=2
Length = 528
Score = 99.4 bits (246), Expect = 5e-21, Method: Composition-based stats.
Identities = 41/61 (67%), Positives = 46/61 (75%)
Query: 20 DVLRPRGVSLMRASLYQPASEFTCFDGSLTIPFSYVNDDYCDCQDSSDEPGTSACPNGTF 79
+V RPRGVSL Y + FTC DGS TIPF VNDDYCDC+D SDEPGT+ACPNG+F
Sbjct: 16 EVKRPRGVSLTNHHFYDESKPFTCLDGSATIPFDQVNDDYCDCKDGSDEPGTAACPNGSF 75
Query: 80 H 80
H
Sbjct: 76 H 76
>sp|O08795|GLU2B_MOUSE Glucosidase 2 subunit beta OS=Mus musculus GN=Prkcsh PE=1 SV=1
Length = 521
Score = 98.2 bits (243), Expect = 1e-20, Method: Composition-based stats.
Identities = 40/61 (65%), Positives = 47/61 (77%)
Query: 20 DVLRPRGVSLMRASLYQPASEFTCFDGSLTIPFSYVNDDYCDCQDSSDEPGTSACPNGTF 79
+V RPRGVSL Y+ + FTC DG+ TIPF VNDDYCDC+D SDEPGT+ACPNG+F
Sbjct: 16 EVKRPRGVSLSNHHFYEESKPFTCLDGTATIPFDQVNDDYCDCKDGSDEPGTAACPNGSF 75
Query: 80 H 80
H
Sbjct: 76 H 76
>sp|Q28034|GLU2B_BOVIN Glucosidase 2 subunit beta OS=Bos taurus GN=PRKCSH PE=2 SV=1
Length = 533
Score = 97.4 bits (241), Expect = 2e-20, Method: Composition-based stats.
Identities = 40/61 (65%), Positives = 46/61 (75%)
Query: 20 DVLRPRGVSLMRASLYQPASEFTCFDGSLTIPFSYVNDDYCDCQDSSDEPGTSACPNGTF 79
+V RPRGVSL Y + FTC DGS +IPF VNDDYCDC+D SDEPGT+ACPNG+F
Sbjct: 15 EVRRPRGVSLTNHHFYDESKPFTCLDGSASIPFDQVNDDYCDCKDGSDEPGTAACPNGSF 74
Query: 80 H 80
H
Sbjct: 75 H 75
>sp|Q9USH8|GLU2B_SCHPO Glucosidase 2 subunit beta OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=gtb1 PE=1 SV=1
Length = 506
Score = 66.2 bits (160), Expect = 5e-11, Method: Composition-based stats.
Identities = 35/77 (45%), Positives = 48/77 (62%), Gaps = 3/77 (3%)
Query: 5 VTLGVLFSSIWLTSSDVLRPRGVSLMRASLYQPASE--FTCFDGSLTIPFSYVNDDYCDC 62
+T +L SS++ T + RGV+ ++ LY+P ++ + C I F+ VNDDYCDC
Sbjct: 9 LTAPLLISSLY-TVNAANDLRGVASDKSDLYKPDAKGNWKCLGSDKLISFNQVNDDYCDC 67
Query: 63 QDSSDEPGTSACPNGTF 79
D SDEPGTSAC NG F
Sbjct: 68 PDGSDEPGTSACHNGKF 84
Score = 30.4 bits (67), Expect = 3.7, Method: Composition-based stats.
Identities = 14/27 (51%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Query: 50 IPFSYVNDDYCDCQDSSDEPGTSACPN 76
IP + V+D CDC D SDE CPN
Sbjct: 96 IPSNRVDDTVCDCCDGSDE-SLIKCPN 121
>sp|Q04924|GLU2B_YEAST Glucosidase 2 subunit beta OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=GTB1 PE=1 SV=1
Length = 702
Score = 42.0 bits (97), Expect = 0.001, Method: Composition-based stats.
Identities = 16/34 (47%), Positives = 21/34 (61%)
Query: 48 LTIPFSYVNDDYCDCQDSSDEPGTSACPNGTFHS 81
+ + S +ND CDC D SDEPG++AC F S
Sbjct: 57 IVLDISQINDGVCDCPDGSDEPGSAACVEDIFKS 90
>sp|A2ARV4|LRP2_MOUSE Low-density lipoprotein receptor-related protein 2 OS=Mus musculus
GN=Lrp2 PE=1 SV=1
Length = 4660
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 23/43 (53%)
Query: 38 ASEFTCFDGSLTIPFSYVNDDYCDCQDSSDEPGTSACPNGTFH 80
+S+F C DGS I Y D DC+D+SDE G P G H
Sbjct: 1190 SSQFKCADGSSCINSRYRCDGVYDCKDNSDEAGCPTRPPGMCH 1232
Score = 30.0 bits (66), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 23/44 (52%), Gaps = 3/44 (6%)
Query: 37 PASEFTCFDGSLTIPFSYVNDDYCDCQDSSDEPGTSACPNGTFH 80
P + FTC D + IP +V D DC D SDE A +GT H
Sbjct: 1111 PPTSFTC-DNHMCIPKEWVCDTDNDCSDGSDEKNCQA--SGTCH 1151
Score = 30.0 bits (66), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 23/48 (47%), Gaps = 5/48 (10%)
Query: 38 ASEFTCFDGSLTIPFSYVNDDYCDCQDSSDEPGT-----SACPNGTFH 80
++EF C IP + D DC DSSDEP T ++C FH
Sbjct: 2867 SNEFQCVSPHRCIPSYWFCDGEADCVDSSDEPDTCGHSLNSCSANQFH 2914
Score = 29.6 bits (65), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Query: 38 ASEFTCFDGSLTIPFSYVNDDYCDCQDSSDEPG 70
++ FTC +G +P+ Y D Y DC D+SDE G
Sbjct: 2744 STAFTCANGRC-VPYHYRCDFYNDCGDNSDEAG 2775
>sp|P98158|LRP2_RAT Low-density lipoprotein receptor-related protein 2 OS=Rattus
norvegicus GN=Lrp2 PE=1 SV=1
Length = 4660
Score = 33.9 bits (76), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 23/43 (53%)
Query: 38 ASEFTCFDGSLTIPFSYVNDDYCDCQDSSDEPGTSACPNGTFH 80
+++F C DGS I Y D DC+D+SDE G P G H
Sbjct: 1190 SAQFKCADGSSCINSRYRCDGVYDCRDNSDEAGCPTRPPGMCH 1232
Score = 29.3 bits (64), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Query: 38 ASEFTCFDGSLTIPFSYVNDDYCDCQDSSDEPG 70
++ FTC +G +P+ Y D Y DC D+SDE G
Sbjct: 2744 STAFTCGNGRC-VPYHYRCDYYNDCGDNSDEAG 2775
Score = 28.9 bits (63), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Query: 37 PASEFTCFDGSLTIPFSYVNDDYCDCQDSSDEPGTSA 73
P++ FTC D + IP +V D DC D SDE A
Sbjct: 1111 PSTSFTC-DNHVCIPKDWVCDTDNDCSDGSDEKNCQA 1146
Score = 28.9 bits (63), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 17/34 (50%)
Query: 38 ASEFTCFDGSLTIPFSYVNDDYCDCQDSSDEPGT 71
++EF C IP + D DC D SDEP T
Sbjct: 2867 SNEFQCLSPQRCIPSYWFCDGEADCADGSDEPDT 2900
>sp|O75581|LRP6_HUMAN Low-density lipoprotein receptor-related protein 6 OS=Homo sapiens
GN=LRP6 PE=1 SV=2
Length = 1613
Score = 33.5 bits (75), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Query: 39 SEFTCFDGSLT-IPFSYVNDDYCDCQDSSDEPGTSACPNGTFH 80
+FTCF G + IP ++ D + +C+D SDE C F
Sbjct: 1252 QQFTCFTGEIDCIPVAWRCDGFTECEDHSDELNCPVCSESQFQ 1294
>sp|Q04833|LRP_CAEEL Low-density lipoprotein receptor-related protein OS=Caenorhabditis
elegans GN=lrp-1 PE=1 SV=1
Length = 4753
Score = 33.5 bits (75), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 29/59 (49%), Gaps = 8/59 (13%)
Query: 40 EFTCF-DGSLTIPFSYVNDDYCDCQDSSDEPGTS-----ACPNGTFH--SHLLTRRFLI 90
+F C D + IP + D DC+D SDEPG S CP G F +H TR F I
Sbjct: 3631 QFACGGDDAKCIPKLWYCDGEPDCRDGSDEPGESICGQRICPVGEFQCTNHNCTRPFQI 3689
Score = 29.6 bits (65), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 16/30 (53%)
Query: 40 EFTCFDGSLTIPFSYVNDDYCDCQDSSDEP 69
+F C L IP S+ D DC D SDEP
Sbjct: 1274 QFKCVSSGLCIPASWKCDGQQDCDDGSDEP 1303
Score = 29.3 bits (64), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 18/32 (56%)
Query: 40 EFTCFDGSLTIPFSYVNDDYCDCQDSSDEPGT 71
+F C D + I S+V D DC D SDEP T
Sbjct: 186 QFRCADKTQCIQKSWVCDGSKDCADGSDEPDT 217
>sp|O88572|LRP6_MOUSE Low-density lipoprotein receptor-related protein 6 OS=Mus musculus
GN=Lrp6 PE=1 SV=1
Length = 1613
Score = 33.1 bits (74), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Query: 39 SEFTCFDGSLT-IPFSYVNDDYCDCQDSSDEPGTSACPNGTFH 80
+FTCF G + IP ++ D + +C+D SDE C F
Sbjct: 1252 QQFTCFTGDIDCIPVAWRCDGFTECEDHSDELNCPVCSESQFQ 1294
>sp|P34434|YL54_CAEEL Uncharacterized protein F44E2.4 OS=Caenorhabditis elegans
GN=F44E2.4 PE=1 SV=2
Length = 1283
Score = 33.1 bits (74), Expect = 0.56, Method: Composition-based stats.
Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Query: 37 PASEFTCFDGSLTIPFSYVNDDYCDCQDSSDEPGTSA 73
P + FTC DGS IP + D DC+D SDE +
Sbjct: 12 PPNTFTCADGS-CIPSDWKGDGEKDCEDGSDEEAVTG 47
>sp|P98156|VLDLR_MOUSE Very low-density lipoprotein receptor OS=Mus musculus GN=Vldlr PE=1
SV=1
Length = 873
Score = 32.7 bits (73), Expect = 0.65, Method: Composition-based stats.
Identities = 17/31 (54%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Query: 38 ASEFTCFDGSLTIPFSYVNDDYCDCQDSSDE 68
A EF C S IP S+V DD DC D SDE
Sbjct: 195 AHEFQCSTSS-CIPLSWVCDDDADCSDQSDE 224
>sp|P34576|MUA3_CAEEL Transmembrane cell adhesion receptor mua-3 OS=Caenorhabditis
elegans GN=mua-3 PE=1 SV=2
Length = 3767
Score = 32.7 bits (73), Expect = 0.66, Method: Composition-based stats.
Identities = 18/43 (41%), Positives = 23/43 (53%), Gaps = 3/43 (6%)
Query: 39 SEFTCFDGSLTIPFSYVNDDYCDCQDSSDEPGTS---ACPNGT 78
++F C DG+ IP + D DC D SDE T+ AC GT
Sbjct: 134 NQFQCSDGTKCIPKAQFQDGKEDCDDGSDEECTTSQFACQCGT 176
Score = 30.8 bits (68), Expect = 2.7, Method: Composition-based stats.
Identities = 20/46 (43%), Positives = 23/46 (50%), Gaps = 5/46 (10%)
Query: 37 PASEFTCFDGSLTI-PFSYVNDDYCDCQDSSDEPGTS---ACPNGT 78
PA F C D S I P Y+N DC+D SDEP C +GT
Sbjct: 98 PAHYFVCRDRSACIEPSKYLNG-VADCKDKSDEPCAQNQFQCSDGT 142
>sp|Q0IIH7|ST14_BOVIN Suppressor of tumorigenicity 14 protein homolog OS=Bos taurus
GN=ST14 PE=2 SV=1
Length = 855
Score = 32.7 bits (73), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Query: 40 EFTCFDGSLTIPFSYVNDDYCDCQDSSDEPGTSACPNGTF 79
+FTC D P +V D DC+D SDE G S CP TF
Sbjct: 493 QFTCRD-KFCKPLFWVCDSVKDCEDGSDEEGCS-CPPNTF 530
>sp|Q91ZU6|DYST_MOUSE Dystonin OS=Mus musculus GN=Dst PE=1 SV=1
Length = 7389
Score = 32.7 bits (73), Expect = 0.71, Method: Composition-based stats.
Identities = 24/70 (34%), Positives = 32/70 (45%), Gaps = 3/70 (4%)
Query: 16 LTSSDVLRPRGVSLMRASLYQPASEFTCFDGSLTIPFSYVNDDYCDCQDSSDEPGTSACP 75
L + V++ S R + +P S T +GS+ P S C Q EP T P
Sbjct: 2104 LADTTVVQKGSESPSRVRVPKPTSSSTQPEGSVLRPESGSILKGCKSQS---EPVTKKYP 2160
Query: 76 NGTFHSHLLT 85
+GT HSH LT
Sbjct: 2161 DGTNHSHFLT 2170
>sp|P98166|VLDLR_RAT Very low-density lipoprotein receptor OS=Rattus norvegicus GN=Vldlr
PE=2 SV=1
Length = 873
Score = 32.7 bits (73), Expect = 0.74, Method: Composition-based stats.
Identities = 17/31 (54%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Query: 38 ASEFTCFDGSLTIPFSYVNDDYCDCQDSSDE 68
A EF C S IP S+V DD DC D SDE
Sbjct: 195 AHEFQCRTSS-CIPLSWVCDDDADCSDQSDE 224
>sp|Q2PC93|SSPO_CHICK SCO-spondin OS=Gallus gallus GN=SSPO PE=2 SV=1
Length = 5255
Score = 32.3 bits (72), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 21/37 (56%)
Query: 32 ASLYQPASEFTCFDGSLTIPFSYVNDDYCDCQDSSDE 68
A + P SEF C G +P +++ D+ DC D SDE
Sbjct: 1359 AQPHCPDSEFPCRSGGRCVPGAWLCDNEDDCGDGSDE 1395
>sp|Q924X6|LRP8_MOUSE Low-density lipoprotein receptor-related protein 8 OS=Mus musculus
GN=Lrp8 PE=1 SV=2
Length = 996
Score = 32.3 bits (72), Expect = 0.83, Method: Composition-based stats.
Identities = 15/32 (46%), Positives = 17/32 (53%)
Query: 37 PASEFTCFDGSLTIPFSYVNDDYCDCQDSSDE 68
P EF C G IP +V D DC+D SDE
Sbjct: 201 PPREFRCGGGGTCIPERWVCDRQFDCEDRSDE 232
>sp|O88307|SORL_MOUSE Sortilin-related receptor OS=Mus musculus GN=Sorl1 PE=2 SV=3
Length = 2215
Score = 32.3 bits (72), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 23/49 (46%), Gaps = 9/49 (18%)
Query: 38 ASEFTCFDGSLTIPFSYVNDDYCDCQDSSDEPGTSA--------CPNGT 78
AS F C +G IP + D DCQD SDE S CPNGT
Sbjct: 1201 ASNFQCHNGH-CIPQRWACDGDADCQDGSDEDPVSCEKKCNGFHCPNGT 1248
Score = 30.8 bits (68), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 16/33 (48%)
Query: 40 EFTCFDGSLTIPFSYVNDDYCDCQDSSDEPGTS 72
EF C DG I S D + DC D SDE S
Sbjct: 1518 EFKCEDGEACIVLSERCDGFLDCSDESDEKACS 1550
>sp|Q99087|LDLR1_XENLA Low-density lipoprotein receptor 1 OS=Xenopus laevis GN=ldlr-a
PE=2 SV=1
Length = 909
Score = 32.0 bits (71), Expect = 1.0, Method: Composition-based stats.
Identities = 14/30 (46%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
Query: 39 SEFTCFDGSLTIPFSYVNDDYCDCQDSSDE 68
+EF C DG IP+ ++ D +C+DSSDE
Sbjct: 30 NEFQCGDGK-CIPYKWICDGSAECKDSSDE 58
>sp|Q98930|SORL_CHICK Sortilin-related receptor (Fragment) OS=Gallus gallus GN=SORL1 PE=2
SV=1
Length = 1592
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 23/49 (46%), Gaps = 9/49 (18%)
Query: 38 ASEFTCFDGSLTIPFSYVNDDYCDCQDSSDEPGTSA--------CPNGT 78
AS F C +G IP + D DCQD SDE T CPNGT
Sbjct: 1107 ASSFQCLNGHC-IPQRWACDGDADCQDGSDEDPTICEKKCNGFQCPNGT 1154
>sp|P98164|LRP2_HUMAN Low-density lipoprotein receptor-related protein 2 OS=Homo sapiens
GN=LRP2 PE=1 SV=3
Length = 4655
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 21/44 (47%)
Query: 38 ASEFTCFDGSLTIPFSYVNDDYCDCQDSSDEPGTSACPNGTFHS 81
AS+F C G I + D DC D+SDE G P G HS
Sbjct: 1189 ASQFKCASGDKCIGVTNRCDGVFDCSDNSDEAGCPTRPPGMCHS 1232
Score = 30.0 bits (66), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
Query: 39 SEFTCFDGSLTIPFSYVNDDYCDCQDSSDE 68
+EF+C +G IP +YV D DCQD SDE
Sbjct: 186 NEFSCGNGEC-IPRAYVCDHDNDCQDGSDE 214
Score = 29.3 bits (64), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Query: 38 ASEFTCFDGSLTIPFSYVNDDYCDCQDSSDEPGTSACPN 76
A EF C DG IP ++ D DC D SDE C N
Sbjct: 2908 ADEFKC-DGGRCIPSEWICDGDNDCGDMSDEDKRHQCQN 2945
>sp|Q6X0I2|VGR_SOLIN Vitellogenin receptor OS=Solenopsis invicta GN=VgR PE=2 SV=1
Length = 1782
Score = 30.8 bits (68), Expect = 2.6, Method: Composition-based stats.
Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 14/53 (26%)
Query: 38 ASEFTCFDGSLTIPFSYVNDDYCDCQDSSDE-------------PGTSACPNG 77
++EF C +G IP ++V D+ DC+D DE P CPNG
Sbjct: 1055 SNEFKCNNGK-CIPNTFVCDNDNDCEDGEDEAAEKCYSKIACKMPKMFKCPNG 1106
Score = 29.3 bits (64), Expect = 6.9, Method: Composition-based stats.
Identities = 18/42 (42%), Positives = 22/42 (52%), Gaps = 3/42 (7%)
Query: 40 EFTCFDGSLTIPFSYVNDDYCDCQDSSDEPG--TSACPNGTF 79
EF C G+ +P+S V D DC D SDE G +AC F
Sbjct: 1228 EFKCSVGT-CLPYSKVCDGNRDCPDGSDETGKCQTACTVNNF 1268
>sp|P56677|ST14_MOUSE Suppressor of tumorigenicity 14 protein homolog OS=Mus musculus
GN=St14 PE=1 SV=2
Length = 855
Score = 30.8 bits (68), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Query: 40 EFTCFDGSLTIPFSYVNDDYCDCQDSSDEPGTSACPNGTF 79
+FTC P +V D DC D SDE G S CP G+F
Sbjct: 493 QFTC-KNQFCKPLFWVCDSVNDCGDGSDEEGCS-CPAGSF 530
>sp|Q95209|SORL_RABIT Sortilin-related receptor OS=Oryctolagus cuniculus GN=SORL1 PE=2 SV=1
Length = 2213
Score = 30.8 bits (68), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 16/33 (48%)
Query: 40 EFTCFDGSLTIPFSYVNDDYCDCQDSSDEPGTS 72
EF C DG I S D + DC D SDE S
Sbjct: 1517 EFKCEDGEACIVLSERCDGFLDCSDESDEKACS 1549
Score = 30.4 bits (67), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 23/49 (46%), Gaps = 9/49 (18%)
Query: 38 ASEFTCFDGSLTIPFSYVNDDYCDCQDSSDEPGTSA--------CPNGT 78
AS F C +G IP + D DCQD SDE + CPNGT
Sbjct: 1200 ASNFQCRNGH-CIPQRWACDGDADCQDGSDEDPANCEKKCNGFRCPNGT 1247
>sp|Q92673|SORL_HUMAN Sortilin-related receptor OS=Homo sapiens GN=SORL1 PE=1 SV=2
Length = 2214
Score = 30.4 bits (67), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 16/33 (48%)
Query: 40 EFTCFDGSLTIPFSYVNDDYCDCQDSSDEPGTS 72
EF C DG I S D + DC D SDE S
Sbjct: 1518 EFQCEDGEACIVLSERCDGFLDCSDESDEKACS 1550
Score = 30.0 bits (66), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 23/49 (46%), Gaps = 9/49 (18%)
Query: 38 ASEFTCFDGSLTIPFSYVNDDYCDCQDSSDEPGTSA--------CPNGT 78
AS F C +G IP + D DCQD SDE + CPNGT
Sbjct: 1201 ASNFQCRNGH-CIPQRWACDGDTDCQDGSDEDPVNCEKKCNGFRCPNGT 1248
>sp|Q99088|LDLR2_XENLA Low-density lipoprotein receptor 2 OS=Xenopus laevis GN=ldlr-b
PE=2 SV=1
Length = 892
Score = 30.4 bits (67), Expect = 3.1, Method: Composition-based stats.
Identities = 13/30 (43%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Query: 39 SEFTCFDGSLTIPFSYVNDDYCDCQDSSDE 68
+EF C DG IP+ ++ D +C+D SDE
Sbjct: 30 NEFQCGDGK-CIPYKWICDGSAECKDGSDE 58
>sp|A2VEC9|SSPO_HUMAN SCO-spondin OS=Homo sapiens GN=SSPO PE=2 SV=1
Length = 5147
Score = 30.4 bits (67), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 23/57 (40%), Gaps = 8/57 (14%)
Query: 57 DDYCDCQDSSDEPGTSACPNGTFHSHLLTRRFLIQISAKTWNSSSQSGTYLRWNNNG 113
D DC+D SDE G P GT H + + SS+Q G L W G
Sbjct: 2254 DGVLDCEDGSDEEGCVLLPEGTGRFHSTAKTLAL--------SSAQPGQLLHWPREG 2302
>sp|P98160|PGBM_HUMAN Basement membrane-specific heparan sulfate proteoglycan core
protein OS=Homo sapiens GN=HSPG2 PE=1 SV=4
Length = 4391
Score = 30.0 bits (66), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 18/30 (60%)
Query: 39 SEFTCFDGSLTIPFSYVNDDYCDCQDSSDE 68
++F C ++ IP S+ D+ DC D SDE
Sbjct: 371 TQFRCVSTNMCIPASFHCDEESDCPDRSDE 400
>sp|P98155|VLDLR_HUMAN Very low-density lipoprotein receptor OS=Homo sapiens GN=VLDLR PE=1
SV=1
Length = 873
Score = 30.0 bits (66), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Query: 38 ASEFTCFDGSLTIPFSYVNDDYCDCQDSSDE 68
A EF C S IP S+V DD DC D SDE
Sbjct: 195 AHEFQCSTSSC-IPISWVCDDDADCSDQSDE 224
>sp|P35953|VLDLR_RABIT Very low-density lipoprotein receptor OS=Oryctolagus cuniculus
GN=VLDLR PE=2 SV=1
Length = 873
Score = 30.0 bits (66), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Query: 38 ASEFTCFDGSLTIPFSYVNDDYCDCQDSSDE 68
A EF C S IP S+V DD DC D SDE
Sbjct: 195 AHEFQCSTSSC-IPISWVCDDDADCSDQSDE 224
>sp|Q14114|LRP8_HUMAN Low-density lipoprotein receptor-related protein 8 OS=Homo sapiens
GN=LRP8 PE=1 SV=4
Length = 963
Score = 29.3 bits (64), Expect = 6.5, Method: Composition-based stats.
Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Query: 40 EFTCFDGSLTIPFSYVNDDYCDCQDSSDEPGTSACPNGTFHSH 82
EF C DG+ + + N + DC D SDE G N H++
Sbjct: 303 EFQCGDGTCVLAIKHCNQEQ-DCPDGSDEAGCLQGLNECLHNN 344
>sp|P97435|ENTK_MOUSE Enteropeptidase OS=Mus musculus GN=Tmprss15 PE=2 SV=1
Length = 1069
Score = 29.3 bits (64), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Query: 40 EFTCFDGSLTIPFSYVNDDYCDCQDSSDEPGTSACPNGT 78
EF C DG+ IP + D Y C+D SDE NGT
Sbjct: 692 EFQCKDGNC-IPLGNLCDSYPHCRDGSDEASCVRFLNGT 729
>sp|Q06561|UNC52_CAEEL Basement membrane proteoglycan OS=Caenorhabditis elegans GN=unc-52
PE=1 SV=2
Length = 3375
Score = 29.3 bits (64), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 17/32 (53%)
Query: 39 SEFTCFDGSLTIPFSYVNDDYCDCQDSSDEPG 70
+EF C D +P S+ D DC D SDE G
Sbjct: 236 TEFQCHDRRQCVPSSFHCDGTNDCHDGSDEVG 267
>sp|Q9NPF0|CD320_HUMAN CD320 antigen OS=Homo sapiens GN=CD320 PE=1 SV=1
Length = 282
Score = 29.3 bits (64), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 12/32 (37%), Positives = 17/32 (53%)
Query: 37 PASEFTCFDGSLTIPFSYVNDDYCDCQDSSDE 68
P ++F C L +P ++ D DC D SDE
Sbjct: 55 PPTKFQCRTSGLCVPLTWRCDRDLDCSDGSDE 86
>sp|Q91ZX7|LRP1_MOUSE Prolow-density lipoprotein receptor-related protein 1 OS=Mus musculus
GN=Lrp1 PE=1 SV=1
Length = 4545
Score = 29.3 bits (64), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 4/58 (6%)
Query: 16 LTSSDVLRPRGVSLMRASLYQPASEFTCFDGSLTIPFSYVNDDYCDCQDSSDEPGTSA 73
+ SSD GV+ + P +F C D + I ++V D DC+D+SDE A
Sbjct: 1090 MDSSDEKSCEGVT----HVCDPNVKFGCKDSARCISKAWVCDGDSDCEDNSDEENCEA 1143
>sp|P98165|VLDLR_CHICK Very low-density lipoprotein receptor OS=Gallus gallus GN=VLDLR
PE=1 SV=1
Length = 863
Score = 29.3 bits (64), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
Query: 40 EFTCFDGSLTIPFSYVNDDYCDCQDSSDE 68
EF C S IP S+V DD DC D SDE
Sbjct: 215 EFQC-KSSTCIPISWVCDDDADCSDHSDE 242
>sp|Q98931|LRP8_CHICK Low-density lipoprotein receptor-related protein 8 OS=Gallus gallus
GN=LRP8 PE=1 SV=1
Length = 917
Score = 29.3 bits (64), Expect = 7.7, Method: Composition-based stats.
Identities = 14/30 (46%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
Query: 39 SEFTCFDGSLTIPFSYVNDDYCDCQDSSDE 68
+EF C + S+ IP +V D+ DC+D SDE
Sbjct: 191 NEFQC-NNSVCIPQLWVCDNQADCEDHSDE 219
>sp|Q9Y5Y6|ST14_HUMAN Suppressor of tumorigenicity 14 protein OS=Homo sapiens GN=ST14
PE=1 SV=2
Length = 855
Score = 29.3 bits (64), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Query: 40 EFTCFDGSLTIPFSYVNDDYCDCQDSSDEPGTSACPNGTF 79
+FTC P +V D DC D+SDE G S CP TF
Sbjct: 493 QFTC-KNKFCKPLFWVCDSVNDCGDNSDEQGCS-CPAQTF 530
>sp|O75197|LRP5_HUMAN Low-density lipoprotein receptor-related protein 5 OS=Homo sapiens
GN=LRP5 PE=1 SV=2
Length = 1615
Score = 29.3 bits (64), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
Query: 40 EFTCFDGSLT-IPFSYVNDDYCDCQDSSDEPGTSACPNGTF 79
+F C G + IP ++ D + +C D SDE G C F
Sbjct: 1263 QFACATGEIDCIPGAWRCDGFPECDDQSDEEGCPVCSAAQF 1303
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.132 0.421
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 44,683,309
Number of Sequences: 539616
Number of extensions: 1625663
Number of successful extensions: 3093
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 30
Number of HSP's that attempted gapping in prelim test: 2772
Number of HSP's gapped (non-prelim): 357
length of query: 115
length of database: 191,569,459
effective HSP length: 83
effective length of query: 32
effective length of database: 146,781,331
effective search space: 4697002592
effective search space used: 4697002592
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)