BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy2514
(71 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|242247191|ref|NP_001156195.1| GTP-binding protein YPTM1-like [Acyrthosiphon pisum]
gi|239799251|dbj|BAH70556.1| ACYPI005808 [Acyrthosiphon pisum]
Length = 231
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/48 (77%), Positives = 37/48 (77%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSMIQRYCRGTFTR 62
VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV Q C G R
Sbjct: 12 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVDFLERQIECNGEDVR 59
>gi|307212547|gb|EFN88270.1| Ras-related protein Rab-23 [Harpegnathos saltator]
Length = 240
Score = 68.2 bits (165), Expect = 6e-10, Method: Composition-based stats.
Identities = 30/33 (90%), Positives = 33/33 (100%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
VVIVGNGAVGKSSMIQR+C+GT+TRDYKKTIGV
Sbjct: 12 VVIVGNGAVGKSSMIQRFCKGTYTRDYKKTIGV 44
>gi|307167470|gb|EFN61043.1| Ras-related protein Rab-23 [Camponotus floridanus]
Length = 240
Score = 67.8 bits (164), Expect = 8e-10, Method: Composition-based stats.
Identities = 30/33 (90%), Positives = 33/33 (100%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
VVIVGNGAVGKSSMIQR+C+GT+TRDYKKTIGV
Sbjct: 12 VVIVGNGAVGKSSMIQRFCKGTYTRDYKKTIGV 44
>gi|383860301|ref|XP_003705629.1| PREDICTED: ras-related protein Rab-23-like [Megachile rotundata]
Length = 240
Score = 67.8 bits (164), Expect = 8e-10, Method: Composition-based stats.
Identities = 30/33 (90%), Positives = 33/33 (100%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
VVIVGNGAVGKSSMIQR+C+GT+TRDYKKTIGV
Sbjct: 12 VVIVGNGAVGKSSMIQRFCKGTYTRDYKKTIGV 44
>gi|72017227|ref|XP_791019.1| PREDICTED: ras-related protein Rab-23-like isoform 2
[Strongylocentrotus purpuratus]
gi|390359535|ref|XP_003729499.1| PREDICTED: ras-related protein Rab-23-like isoform 1
[Strongylocentrotus purpuratus]
Length = 233
Score = 67.8 bits (164), Expect = 9e-10, Method: Composition-based stats.
Identities = 30/33 (90%), Positives = 32/33 (96%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
VVIVGNGAVGKSSMIQRYC+G FT+DYKKTIGV
Sbjct: 12 VVIVGNGAVGKSSMIQRYCKGIFTKDYKKTIGV 44
>gi|332020425|gb|EGI60845.1| Ras-related protein Rab-23 [Acromyrmex echinatior]
Length = 240
Score = 67.4 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 30/33 (90%), Positives = 33/33 (100%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
VVIVGNGAVGKSSMIQR+C+GT+TRDYKKTIGV
Sbjct: 12 VVIVGNGAVGKSSMIQRFCKGTYTRDYKKTIGV 44
>gi|328788824|ref|XP_003251188.1| PREDICTED: ras-related protein Rab-23 isoform 1 [Apis mellifera]
Length = 301
Score = 67.4 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 30/33 (90%), Positives = 33/33 (100%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
VVIVGNGAVGKSSMIQR+C+GT+TRDYKKTIGV
Sbjct: 12 VVIVGNGAVGKSSMIQRFCKGTYTRDYKKTIGV 44
>gi|443686937|gb|ELT90055.1| hypothetical protein CAPTEDRAFT_178029 [Capitella teleta]
Length = 240
Score = 67.4 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 30/33 (90%), Positives = 32/33 (96%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
VVIVGNGAVGKSSMIQRYC+G FT+DYKKTIGV
Sbjct: 16 VVIVGNGAVGKSSMIQRYCKGIFTKDYKKTIGV 48
>gi|350404524|ref|XP_003487131.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein Rab-23-like
[Bombus impatiens]
Length = 295
Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 30/33 (90%), Positives = 33/33 (100%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
VVIVGNGAVGKSSMIQR+C+GT+TRDYKKTIGV
Sbjct: 12 VVIVGNGAVGKSSMIQRFCKGTYTRDYKKTIGV 44
>gi|328788822|ref|XP_393641.3| PREDICTED: ras-related protein Rab-23 isoform 2 [Apis mellifera]
gi|380027747|ref|XP_003697580.1| PREDICTED: ras-related protein Rab-23-like [Apis florea]
Length = 240
Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 30/33 (90%), Positives = 33/33 (100%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
VVIVGNGAVGKSSMIQR+C+GT+TRDYKKTIGV
Sbjct: 12 VVIVGNGAVGKSSMIQRFCKGTYTRDYKKTIGV 44
>gi|156554968|ref|XP_001602379.1| PREDICTED: ras-related protein Rab-23-like [Nasonia vitripennis]
Length = 238
Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 30/33 (90%), Positives = 33/33 (100%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
VVIVGNGAVGKSSMIQR+C+GT+TRDYKKTIGV
Sbjct: 12 VVIVGNGAVGKSSMIQRFCKGTYTRDYKKTIGV 44
>gi|321463482|gb|EFX74498.1| hypothetical protein DAPPUDRAFT_199917 [Daphnia pulex]
Length = 197
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/38 (81%), Positives = 33/38 (86%)
Query: 10 SIKGTVVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
I VVIVGNGAVGKSSMIQR+C+G FTRDYKKTIGV
Sbjct: 7 EIAVKVVIVGNGAVGKSSMIQRFCKGVFTRDYKKTIGV 44
>gi|340728156|ref|XP_003402394.1| PREDICTED: ras-related protein Rab-23-like, partial [Bombus
terrestris]
Length = 106
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/40 (77%), Positives = 36/40 (90%)
Query: 9 GSIKGTVVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
G++ VVIVGNGAVGKSSMIQR+C+GT+TRDYKKTIGV
Sbjct: 6 GNLYLQVVIVGNGAVGKSSMIQRFCKGTYTRDYKKTIGVD 45
>gi|410959474|ref|XP_003986333.1| PREDICTED: ras-related protein Rab-23-like [Felis catus]
Length = 231
Score = 65.9 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 28/33 (84%), Positives = 32/33 (96%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
+V+VGNGAVGKSSMIQRYC+G FT+DYKKTIGV
Sbjct: 12 MVVVGNGAVGKSSMIQRYCKGIFTKDYKKTIGV 44
>gi|403268709|ref|XP_003926411.1| PREDICTED: ras-related protein Rab-23 isoform 1 [Saimiri
boliviensis boliviensis]
gi|403268711|ref|XP_003926412.1| PREDICTED: ras-related protein Rab-23 isoform 2 [Saimiri
boliviensis boliviensis]
gi|403268713|ref|XP_003926413.1| PREDICTED: ras-related protein Rab-23 isoform 3 [Saimiri
boliviensis boliviensis]
Length = 237
Score = 65.9 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 28/33 (84%), Positives = 32/33 (96%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
+V+VGNGAVGKSSMIQRYC+G FT+DYKKTIGV
Sbjct: 12 MVVVGNGAVGKSSMIQRYCKGIFTKDYKKTIGV 44
>gi|157823749|ref|NP_001102475.1| ras-related protein Rab-23 [Rattus norvegicus]
gi|149046425|gb|EDL99318.1| RAB23, member RAS oncogene family (predicted) [Rattus norvegicus]
Length = 237
Score = 65.9 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 28/33 (84%), Positives = 32/33 (96%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
+V+VGNGAVGKSSMIQRYC+G FT+DYKKTIGV
Sbjct: 12 MVVVGNGAVGKSSMIQRYCKGIFTKDYKKTIGV 44
>gi|395833379|ref|XP_003789715.1| PREDICTED: ras-related protein Rab-23 isoform 1 [Otolemur
garnettii]
gi|395833381|ref|XP_003789716.1| PREDICTED: ras-related protein Rab-23 isoform 2 [Otolemur
garnettii]
Length = 237
Score = 65.9 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 28/33 (84%), Positives = 32/33 (96%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
+V+VGNGAVGKSSMIQRYC+G FT+DYKKTIGV
Sbjct: 12 MVVVGNGAVGKSSMIQRYCKGIFTKDYKKTIGV 44
>gi|194040262|ref|XP_001929671.1| PREDICTED: ras-related protein Rab-23-like [Sus scrofa]
Length = 237
Score = 65.9 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 28/33 (84%), Positives = 32/33 (96%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
+V+VGNGAVGKSSMIQRYC+G FT+DYKKTIGV
Sbjct: 12 MVVVGNGAVGKSSMIQRYCKGIFTKDYKKTIGV 44
>gi|296198485|ref|XP_002746722.1| PREDICTED: ras-related protein Rab-23-like [Callithrix jacchus]
Length = 237
Score = 65.9 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 28/33 (84%), Positives = 32/33 (96%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
+V+VGNGAVGKSSMIQRYC+G FT+DYKKTIGV
Sbjct: 12 MVVVGNGAVGKSSMIQRYCKGIFTKDYKKTIGV 44
>gi|351694617|gb|EHA97535.1| Ras-related protein Rab-23 [Heterocephalus glaber]
Length = 237
Score = 65.9 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 28/33 (84%), Positives = 32/33 (96%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
+V+VGNGAVGKSSMIQRYC+G FT+DYKKTIGV
Sbjct: 12 MVVVGNGAVGKSSMIQRYCKGIFTKDYKKTIGV 44
>gi|344264766|ref|XP_003404461.1| PREDICTED: ras-related protein Rab-23-like [Loxodonta africana]
Length = 237
Score = 65.9 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 28/33 (84%), Positives = 32/33 (96%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
+V+VGNGAVGKSSMIQRYC+G FT+DYKKTIGV
Sbjct: 12 MVVVGNGAVGKSSMIQRYCKGIFTKDYKKTIGV 44
>gi|194223637|ref|XP_001499806.2| PREDICTED: ras-related protein Rab-23-like [Equus caballus]
Length = 237
Score = 65.9 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 28/33 (84%), Positives = 32/33 (96%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
+V+VGNGAVGKSSMIQRYC+G FT+DYKKTIGV
Sbjct: 12 MVVVGNGAVGKSSMIQRYCKGIFTKDYKKTIGV 44
>gi|332634768|ref|NP_001193835.1| ras-related protein Rab-23 [Bos taurus]
gi|426250098|ref|XP_004018775.1| PREDICTED: ras-related protein Rab-23 [Ovis aries]
gi|296474595|tpg|DAA16710.1| TPA: Rab23-like [Bos taurus]
gi|440902781|gb|ELR53528.1| Ras-related protein Rab-23 [Bos grunniens mutus]
Length = 237
Score = 65.5 bits (158), Expect = 3e-09, Method: Composition-based stats.
Identities = 28/33 (84%), Positives = 32/33 (96%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
+V+VGNGAVGKSSMIQRYC+G FT+DYKKTIGV
Sbjct: 12 MVVVGNGAVGKSSMIQRYCKGIFTKDYKKTIGV 44
>gi|355561818|gb|EHH18450.1| hypothetical protein EGK_15045 [Macaca mulatta]
Length = 237
Score = 65.5 bits (158), Expect = 3e-09, Method: Composition-based stats.
Identities = 28/33 (84%), Positives = 32/33 (96%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
+V+VGNGAVGKSSMIQRYC+G FT+DYKKTIGV
Sbjct: 12 MVVVGNGAVGKSSMIQRYCKGIFTKDYKKTIGV 44
>gi|73973432|ref|XP_538975.2| PREDICTED: ras-related protein Rab-23 [Canis lupus familiaris]
Length = 237
Score = 65.5 bits (158), Expect = 3e-09, Method: Composition-based stats.
Identities = 28/33 (84%), Positives = 32/33 (96%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
+V+VGNGAVGKSSMIQRYC+G FT+DYKKTIGV
Sbjct: 12 MVVVGNGAVGKSSMIQRYCKGIFTKDYKKTIGV 44
>gi|31543565|ref|NP_033025.2| ras-related protein Rab-23 [Mus musculus]
gi|228480287|ref|NP_001153201.1| ras-related protein Rab-23 [Mus musculus]
gi|12855257|dbj|BAB30270.1| unnamed protein product [Mus musculus]
gi|26338556|dbj|BAC32949.1| unnamed protein product [Mus musculus]
gi|148682489|gb|EDL14436.1| RAB23, member RAS oncogene family, isoform CRA_a [Mus musculus]
Length = 237
Score = 65.5 bits (158), Expect = 4e-09, Method: Composition-based stats.
Identities = 28/33 (84%), Positives = 32/33 (96%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
+V+VGNGAVGKSSMIQRYC+G FT+DYKKTIGV
Sbjct: 12 MVVVGNGAVGKSSMIQRYCKGIFTKDYKKTIGV 44
>gi|1710020|sp|P35288.2|RAB23_MOUSE RecName: Full=Ras-related protein Rab-23; AltName: Full=Rab-15;
Flags: Precursor
gi|438162|emb|CAA80474.1| Rab23 protein [Mus musculus]
gi|19344040|gb|AAH25578.1| RAB23, member RAS oncogene family [Mus musculus]
gi|112293005|dbj|BAF02880.1| Rab23 [Mus musculus]
gi|741024|prf||2006284A GTPase Rab23
Length = 237
Score = 65.5 bits (158), Expect = 4e-09, Method: Composition-based stats.
Identities = 28/33 (84%), Positives = 32/33 (96%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
+V+VGNGAVGKSSMIQRYC+G FT+DYKKTIGV
Sbjct: 12 MVVVGNGAVGKSSMIQRYCKGIFTKDYKKTIGV 44
>gi|387762850|ref|NP_001248670.1| ras-related protein Rab-23 [Macaca mulatta]
gi|402867347|ref|XP_003897819.1| PREDICTED: ras-related protein Rab-23 isoform 1 [Papio anubis]
gi|402867349|ref|XP_003897820.1| PREDICTED: ras-related protein Rab-23 isoform 2 [Papio anubis]
gi|402867351|ref|XP_003897821.1| PREDICTED: ras-related protein Rab-23 isoform 3 [Papio anubis]
gi|355748665|gb|EHH53148.1| hypothetical protein EGM_13724 [Macaca fascicularis]
gi|380787357|gb|AFE65554.1| ras-related protein Rab-23 [Macaca mulatta]
gi|383419125|gb|AFH32776.1| ras-related protein Rab-23 [Macaca mulatta]
Length = 237
Score = 65.5 bits (158), Expect = 4e-09, Method: Composition-based stats.
Identities = 28/33 (84%), Positives = 32/33 (96%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
+V+VGNGAVGKSSMIQRYC+G FT+DYKKTIGV
Sbjct: 12 MVVVGNGAVGKSSMIQRYCKGIFTKDYKKTIGV 44
>gi|301767102|ref|XP_002918967.1| PREDICTED: ras-related protein Rab-23-like [Ailuropoda
melanoleuca]
gi|281341027|gb|EFB16611.1| hypothetical protein PANDA_007522 [Ailuropoda melanoleuca]
Length = 237
Score = 65.5 bits (158), Expect = 4e-09, Method: Composition-based stats.
Identities = 28/33 (84%), Positives = 32/33 (96%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
+V+VGNGAVGKSSMIQRYC+G FT+DYKKTIGV
Sbjct: 12 MVVVGNGAVGKSSMIQRYCKGIFTKDYKKTIGV 44
>gi|114607987|ref|XP_527422.2| PREDICTED: uncharacterized protein LOC472043 isoform 2 [Pan
troglodytes]
gi|114607989|ref|XP_001158655.1| PREDICTED: uncharacterized protein LOC472043 isoform 1 [Pan
troglodytes]
gi|297678432|ref|XP_002817078.1| PREDICTED: ras-related protein Rab-23 isoform 1 [Pongo abelii]
gi|332210124|ref|XP_003254155.1| PREDICTED: ras-related protein Rab-23 isoform 1 [Nomascus
leucogenys]
gi|332210126|ref|XP_003254156.1| PREDICTED: ras-related protein Rab-23 isoform 2 [Nomascus
leucogenys]
gi|395737380|ref|XP_003776909.1| PREDICTED: ras-related protein Rab-23 isoform 2 [Pongo abelii]
gi|441667738|ref|XP_004092001.1| PREDICTED: ras-related protein Rab-23 [Nomascus leucogenys]
gi|20379078|gb|AAM21099.1|AF498951_1 small GTP binding protein RAB23 [Homo sapiens]
gi|189054025|dbj|BAG36532.1| unnamed protein product [Homo sapiens]
gi|410227584|gb|JAA11011.1| RAB23, member RAS oncogene family [Pan troglodytes]
gi|410227586|gb|JAA11012.1| RAB23, member RAS oncogene family [Pan troglodytes]
gi|410246804|gb|JAA11369.1| RAB23, member RAS oncogene family [Pan troglodytes]
gi|410292298|gb|JAA24749.1| RAB23, member RAS oncogene family [Pan troglodytes]
gi|410292300|gb|JAA24750.1| RAB23, member RAS oncogene family [Pan troglodytes]
gi|410331083|gb|JAA34488.1| RAB23, member RAS oncogene family [Pan troglodytes]
Length = 237
Score = 65.5 bits (158), Expect = 4e-09, Method: Composition-based stats.
Identities = 28/33 (84%), Positives = 32/33 (96%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
+V+VGNGAVGKSSMIQRYC+G FT+DYKKTIGV
Sbjct: 12 MVVVGNGAVGKSSMIQRYCKGIFTKDYKKTIGV 44
>gi|148682490|gb|EDL14437.1| RAB23, member RAS oncogene family, isoform CRA_b [Mus musculus]
Length = 264
Score = 65.5 bits (158), Expect = 4e-09, Method: Composition-based stats.
Identities = 28/33 (84%), Positives = 32/33 (96%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
+V+VGNGAVGKSSMIQRYC+G FT+DYKKTIGV
Sbjct: 39 MVVVGNGAVGKSSMIQRYCKGIFTKDYKKTIGV 71
>gi|432112846|gb|ELK35442.1| Ras-related protein Rab-23 [Myotis davidii]
Length = 236
Score = 65.5 bits (158), Expect = 4e-09, Method: Composition-based stats.
Identities = 28/33 (84%), Positives = 32/33 (96%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
+V+VGNGAVGKSSMIQRYC+G FT+DYKKTIGV
Sbjct: 12 MVVVGNGAVGKSSMIQRYCKGIFTKDYKKTIGV 44
>gi|291396430|ref|XP_002714566.1| PREDICTED: Rab23-like [Oryctolagus cuniculus]
Length = 237
Score = 65.5 bits (158), Expect = 4e-09, Method: Composition-based stats.
Identities = 28/33 (84%), Positives = 32/33 (96%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
+V+VGNGAVGKSSMIQRYC+G FT+DYKKTIGV
Sbjct: 12 MVVVGNGAVGKSSMIQRYCKGIFTKDYKKTIGV 44
>gi|34485714|ref|NP_057361.3| ras-related protein Rab-23 [Homo sapiens]
gi|34485716|ref|NP_899050.1| ras-related protein Rab-23 [Homo sapiens]
gi|12643897|sp|Q9ULC3.1|RAB23_HUMAN RecName: Full=Ras-related protein Rab-23; Flags: Precursor
gi|6475048|dbj|BAA87324.1| RAB23 protein [Homo sapiens]
gi|13516443|dbj|BAB40309.1| hRAB-23 protein [Homo sapiens]
gi|21955336|gb|AAH15021.1| RAB23, member RAS oncogene family [Homo sapiens]
gi|50612562|gb|AAT79492.1| RAB family small GTP binding protein RAB 23 [Homo sapiens]
gi|51476468|emb|CAH18224.1| hypothetical protein [Homo sapiens]
gi|119624881|gb|EAX04476.1| RAB23, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|119624883|gb|EAX04478.1| RAB23, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|119624884|gb|EAX04479.1| RAB23, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|190690197|gb|ACE86873.1| RAB23, member RAS oncogene family protein [synthetic construct]
gi|190691573|gb|ACE87561.1| RAB23, member RAS oncogene family protein [synthetic construct]
gi|261861474|dbj|BAI47259.1| RAB23, member RAS oncogene family [synthetic construct]
Length = 237
Score = 65.5 bits (158), Expect = 4e-09, Method: Composition-based stats.
Identities = 28/33 (84%), Positives = 32/33 (96%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
+V+VGNGAVGKSSMIQRYC+G FT+DYKKTIGV
Sbjct: 12 MVVVGNGAVGKSSMIQRYCKGIFTKDYKKTIGV 44
>gi|348588989|ref|XP_003480247.1| PREDICTED: ras-related protein Rab-23-like [Cavia porcellus]
Length = 236
Score = 65.5 bits (158), Expect = 4e-09, Method: Composition-based stats.
Identities = 28/33 (84%), Positives = 32/33 (96%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
+V+VGNGAVGKSSMIQRYC+G FT+DYKKTIGV
Sbjct: 12 MVVVGNGAVGKSSMIQRYCKGVFTKDYKKTIGV 44
>gi|326431353|gb|EGD76923.1| Ras family domain-containing protein [Salpingoeca sp. ATCC 50818]
Length = 228
Score = 65.1 bits (157), Expect = 5e-09, Method: Composition-based stats.
Identities = 29/33 (87%), Positives = 32/33 (96%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
V+IVGNGAVGKSSMIQRYC+G FTR+YKKTIGV
Sbjct: 12 VLIVGNGAVGKSSMIQRYCKGIFTREYKKTIGV 44
>gi|397517533|ref|XP_003828964.1| PREDICTED: ras-related protein Rab-23 [Pan paniscus]
gi|397517535|ref|XP_003828965.1| PREDICTED: ras-related protein Rab-23 [Pan paniscus]
gi|397517537|ref|XP_003828966.1| PREDICTED: ras-related protein Rab-23 [Pan paniscus]
Length = 237
Score = 65.1 bits (157), Expect = 5e-09, Method: Composition-based stats.
Identities = 28/33 (84%), Positives = 32/33 (96%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
+V+VGNGAVGKSSMIQRYC+G FT+DYKKTIGV
Sbjct: 12 MVVVGNGAVGKSSMIQRYCKGIFTKDYKKTIGV 44
>gi|6841496|gb|AAF29101.1|AF161486_1 HSPC137 [Homo sapiens]
Length = 237
Score = 65.1 bits (157), Expect = 5e-09, Method: Composition-based stats.
Identities = 28/33 (84%), Positives = 32/33 (96%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
+V+VGNGAVGKSSMIQRYC+G FT+DYKKTIGV
Sbjct: 12 MVVVGNGAVGKSSMIQRYCKGIFTKDYKKTIGV 44
>gi|431838246|gb|ELK00178.1| Ras-related protein Rab-23 [Pteropus alecto]
Length = 157
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/33 (84%), Positives = 32/33 (96%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
+V+VGNGAVGKSSMIQRYC+G FT+DYKKTIGV
Sbjct: 12 MVVVGNGAVGKSSMIQRYCKGIFTKDYKKTIGV 44
>gi|73535794|pdb|1Z22|A Chain A, Gdp-Bound Rab23 Gtpase Crystallized In C222(1) Space
Group
gi|73535795|pdb|1Z2A|A Chain A, Gdp-Bound Rab23 Gtpase Crystallized In P2(1)2(1)2(1)
Space Group
Length = 168
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/33 (84%), Positives = 32/33 (96%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
+V+VGNGAVGKSSMIQRYC+G FT+DYKKTIGV
Sbjct: 8 MVVVGNGAVGKSSMIQRYCKGIFTKDYKKTIGV 40
>gi|167524138|ref|XP_001746405.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163775167|gb|EDQ88792.1| predicted protein [Monosiga brevicollis MX1]
Length = 227
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 28/33 (84%), Positives = 32/33 (96%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
V+IVGNGAVGKSSMIQRYC+G FT++YKKTIGV
Sbjct: 12 VLIVGNGAVGKSSMIQRYCKGVFTQEYKKTIGV 44
>gi|444724982|gb|ELW65566.1| Ras-related protein Rab-23 [Tupaia chinensis]
Length = 206
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/33 (84%), Positives = 32/33 (96%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
+V+VGNGAVGKSSMIQRYC+G FT+DYKKTIGV
Sbjct: 12 MVVVGNGAVGKSSMIQRYCKGIFTKDYKKTIGV 44
>gi|355714875|gb|AES05146.1| RAB23, member RAS oncoprotein family [Mustela putorius furo]
Length = 103
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/33 (84%), Positives = 32/33 (96%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
+V+VGNGAVGKSSMIQRYC+G FT+DYKKTIGV
Sbjct: 23 MVVVGNGAVGKSSMIQRYCKGIFTKDYKKTIGV 55
>gi|344257913|gb|EGW14017.1| Ras-related protein Rab-23 [Cricetulus griseus]
Length = 236
Score = 61.2 bits (147), Expect = 7e-08, Method: Composition-based stats.
Identities = 26/33 (78%), Positives = 30/33 (90%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
+V+VGNGAVGKSSMIQRYC+ FT+DY KTIGV
Sbjct: 11 MVVVGNGAVGKSSMIQRYCKDIFTKDYNKTIGV 43
>gi|354491629|ref|XP_003507957.1| PREDICTED: ras-related protein Rab-23-like [Cricetulus griseus]
Length = 237
Score = 61.2 bits (147), Expect = 8e-08, Method: Composition-based stats.
Identities = 26/33 (78%), Positives = 30/33 (90%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
+V+VGNGAVGKSSMIQRYC+ FT+DY KTIGV
Sbjct: 12 MVVVGNGAVGKSSMIQRYCKDIFTKDYNKTIGV 44
>gi|290462343|gb|ADD24219.1| Ras-related protein Rab-23 [Lepeophtheirus salmonis]
Length = 59
Score = 60.8 bits (146), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 28/33 (84%), Positives = 32/33 (96%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
VVIVGNGAVGKSSMIQRYC+G +T++YKKTIGV
Sbjct: 19 VVIVGNGAVGKSSMIQRYCKGLYTQNYKKTIGV 51
>gi|391334451|ref|XP_003741617.1| PREDICTED: ras-related protein Rab-23-like [Metaseiulus
occidentalis]
Length = 216
Score = 60.1 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 24/33 (72%), Positives = 32/33 (96%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
+V+VGNGAVGKSS+IQR+CRG F+++YK+TIGV
Sbjct: 9 LVVVGNGAVGKSSLIQRFCRGVFSQNYKQTIGV 41
>gi|255080678|ref|XP_002503912.1| predicted protein [Micromonas sp. RCC299]
gi|226519179|gb|ACO65170.1| predicted protein [Micromonas sp. RCC299]
Length = 272
Score = 57.4 bits (137), Expect = 9e-07, Method: Composition-based stats.
Identities = 25/33 (75%), Positives = 30/33 (90%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
VV++GNG VGKSSMI+RYC GT+T +YKKTIGV
Sbjct: 14 VVVLGNGCVGKSSMIRRYCMGTYTDEYKKTIGV 46
>gi|428177061|gb|EKX45943.1| hypothetical protein GUITHDRAFT_159659 [Guillardia theta
CCMP2712]
Length = 262
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 23/41 (56%), Positives = 32/41 (78%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSMIQRY 55
+++VGNG VGKSSMI+R+C+G +T YKKTIGV ++Y
Sbjct: 13 IIVVGNGGVGKSSMIRRFCKGEYTDTYKKTIGVDFLEKEKY 53
>gi|357631098|gb|EHJ78793.1| putative rab23 [Danaus plexippus]
Length = 222
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 23/23 (100%), Positives = 23/23 (100%)
Query: 25 KSSMIQRYCRGTFTRDYKKTIGV 47
KSSMIQRYCRGTFTRDYKKTIGV
Sbjct: 22 KSSMIQRYCRGTFTRDYKKTIGV 44
>gi|401425661|ref|XP_003877315.1| putative small GTP-binding protein Rab28 [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322493560|emb|CBZ28848.1| putative small GTP-binding protein Rab28 [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 235
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 22/39 (56%), Positives = 32/39 (82%)
Query: 9 GSIKGTVVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
G+I+ VV++GNGAVGK+S+I+ +C FT+ YK+TIGV
Sbjct: 11 GTIQFKVVVLGNGAVGKTSLIRHFCDSGFTKSYKQTIGV 49
>gi|398019438|ref|XP_003862883.1| small GTP-binding protein Rab28, putative [Leishmania donovani]
gi|322501114|emb|CBZ36192.1| small GTP-binding protein Rab28, putative [Leishmania donovani]
Length = 235
Score = 52.4 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 21/39 (53%), Positives = 32/39 (82%)
Query: 9 GSIKGTVVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
G+++ VV++GNGAVGK+S+I+ +C FT+ YK+TIGV
Sbjct: 11 GAMQFKVVVLGNGAVGKTSLIRHFCDSGFTKSYKQTIGV 49
>gi|157872460|ref|XP_001684775.1| putative small GTP-binding protein Rab28 [Leishmania major strain
Friedlin]
gi|68127845|emb|CAJ06306.1| putative small GTP-binding protein Rab28 [Leishmania major strain
Friedlin]
Length = 235
Score = 52.4 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 21/39 (53%), Positives = 32/39 (82%)
Query: 9 GSIKGTVVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
G+++ VV++GNGAVGK+S+I+ +C FT+ YK+TIGV
Sbjct: 11 GAMQFKVVVLGNGAVGKTSLIRHFCDSGFTKSYKQTIGV 49
>gi|146093812|ref|XP_001467017.1| putative small GTP-binding protein Rab28 [Leishmania infantum
JPCM5]
gi|134071381|emb|CAM70068.1| putative small GTP-binding protein Rab28 [Leishmania infantum
JPCM5]
Length = 235
Score = 52.4 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 21/39 (53%), Positives = 32/39 (82%)
Query: 9 GSIKGTVVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
G+++ VV++GNGAVGK+S+I+ +C FT+ YK+TIGV
Sbjct: 11 GTMQFKVVVLGNGAVGKTSLIRHFCDSGFTKSYKQTIGV 49
>gi|332374980|gb|AEE62631.1| unknown [Dendroctonus ponderosae]
Length = 239
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 21/23 (91%), Positives = 23/23 (100%)
Query: 25 KSSMIQRYCRGTFTRDYKKTIGV 47
KSSMIQRYC+GTFT+DYKKTIGV
Sbjct: 22 KSSMIQRYCKGTFTKDYKKTIGV 44
>gi|91087349|ref|XP_975612.1| PREDICTED: similar to GA15247-PA [Tribolium castaneum]
gi|270010613|gb|EFA07061.1| hypothetical protein TcasGA2_TC010038 [Tribolium castaneum]
Length = 232
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 21/23 (91%), Positives = 23/23 (100%)
Query: 25 KSSMIQRYCRGTFTRDYKKTIGV 47
KSSMIQRYC+GTFT+DYKKTIGV
Sbjct: 22 KSSMIQRYCKGTFTKDYKKTIGV 44
>gi|126306731|ref|XP_001365593.1| PREDICTED: ras-related protein Rab-7L1-like isoform 1
[Monodelphis domestica]
Length = 204
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 31/37 (83%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSM 51
V++VG+ AVGK+S++QRYC+ +F+R YK T+GV ++
Sbjct: 10 VLVVGDAAVGKTSLVQRYCQDSFSRHYKSTVGVDFAL 46
>gi|154341705|ref|XP_001566804.1| putative small GTP-binding protein Rab28 [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134064129|emb|CAM40324.1| putative small GTP-binding protein Rab28 [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 235
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 21/39 (53%), Positives = 31/39 (79%)
Query: 9 GSIKGTVVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
G+ + VV++GNGAVGK+S+I+ +C FT+ YK+TIGV
Sbjct: 11 GATQFKVVVLGNGAVGKTSLIRHFCDSGFTKSYKQTIGV 49
>gi|149632570|ref|XP_001509653.1| PREDICTED: ras-related protein Rab-36-like [Ornithorhynchus
anatinus]
Length = 267
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/41 (56%), Positives = 31/41 (75%), Gaps = 1/41 (2%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSMIQRY 55
VV+VG+ VGK+S+I R+C+ TF RDYK TIGV I+R+
Sbjct: 60 VVVVGDLCVGKTSLINRFCKDTFDRDYKATIGVDFE-IERF 99
Score = 37.7 bits (86), Expect = 0.93, Method: Composition-based stats.
Identities = 14/22 (63%), Positives = 18/22 (81%)
Query: 48 KSSMIQRYCRGTFTRDYKKTIG 69
K+S+I R+C+ TF RDYK TIG
Sbjct: 70 KTSLINRFCKDTFDRDYKATIG 91
>gi|403294870|ref|XP_003938385.1| PREDICTED: ras-related protein Rab-7L1 isoform 1 [Saimiri
boliviensis boliviensis]
Length = 203
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 29/33 (87%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
V++VG+ AVGK+S++QRYC+ +F++ YK T+GV
Sbjct: 10 VLVVGDAAVGKTSLVQRYCQDSFSKHYKSTVGV 42
>gi|294941013|ref|XP_002782969.1| Rab11, putative [Perkinsus marinus ATCC 50983]
gi|239895151|gb|EER14765.1| Rab11, putative [Perkinsus marinus ATCC 50983]
Length = 198
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 28/33 (84%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
V++VGNG VGK+SMI R+ RG +T++YKKT+ V
Sbjct: 13 VIVVGNGQVGKTSMITRFARGVYTQEYKKTLAV 45
>gi|326916365|ref|XP_003204478.1| PREDICTED: ras-related protein Rab-23-like [Meleagris gallopavo]
Length = 237
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 20/23 (86%), Positives = 22/23 (95%)
Query: 25 KSSMIQRYCRGTFTRDYKKTIGV 47
KSSMIQRYC+G FT+DYKKTIGV
Sbjct: 22 KSSMIQRYCKGIFTKDYKKTIGV 44
>gi|158519801|ref|NP_001103530.1| ras-related protein Rab-23 [Gallus gallus]
gi|158252062|gb|ABW24032.1| Rab23 GTPase [Gallus gallus]
Length = 237
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 20/23 (86%), Positives = 22/23 (95%)
Query: 25 KSSMIQRYCRGTFTRDYKKTIGV 47
KSSMIQRYC+G FT+DYKKTIGV
Sbjct: 22 KSSMIQRYCKGIFTKDYKKTIGV 44
>gi|387017932|gb|AFJ51084.1| ras-related protein Rab-23-like [Crotalus adamanteus]
Length = 237
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 20/23 (86%), Positives = 22/23 (95%)
Query: 25 KSSMIQRYCRGTFTRDYKKTIGV 47
KSSMIQRYC+G FT+DYKKTIGV
Sbjct: 22 KSSMIQRYCKGIFTKDYKKTIGV 44
>gi|149639357|ref|XP_001505274.1| PREDICTED: ras-related protein Rab-23-like [Ornithorhynchus
anatinus]
Length = 237
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 20/23 (86%), Positives = 22/23 (95%)
Query: 25 KSSMIQRYCRGTFTRDYKKTIGV 47
KSSMIQRYC+G FT+DYKKTIGV
Sbjct: 22 KSSMIQRYCKGIFTKDYKKTIGV 44
>gi|395534394|ref|XP_003769227.1| PREDICTED: ras-related protein Rab-23 [Sarcophilus harrisii]
Length = 237
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 20/23 (86%), Positives = 22/23 (95%)
Query: 25 KSSMIQRYCRGTFTRDYKKTIGV 47
KSSMIQRYC+G FT+DYKKTIGV
Sbjct: 22 KSSMIQRYCKGIFTKDYKKTIGV 44
>gi|405971384|gb|EKC36223.1| Ras-related protein Rab-23 [Crassostrea gigas]
Length = 224
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 20/23 (86%), Positives = 22/23 (95%)
Query: 25 KSSMIQRYCRGTFTRDYKKTIGV 47
KSSMIQRYC+G FT+DYKKTIGV
Sbjct: 22 KSSMIQRYCKGIFTKDYKKTIGV 44
>gi|403373891|gb|EJY86873.1| Ras-related protein rab28-like protein [Oxytricha trifallax]
Length = 243
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 19/33 (57%), Positives = 26/33 (78%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
+V++GNG VGK+S+I R+C F R YK+TIGV
Sbjct: 30 IVVLGNGTVGKTSIIMRFCEDHFARSYKQTIGV 62
>gi|126310181|ref|XP_001364838.1| PREDICTED: ras-related protein Rab-23-like [Monodelphis
domestica]
Length = 237
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 20/23 (86%), Positives = 22/23 (95%)
Query: 25 KSSMIQRYCRGTFTRDYKKTIGV 47
KSSMIQRYC+G FT+DYKKTIGV
Sbjct: 22 KSSMIQRYCKGIFTKDYKKTIGV 44
>gi|334322278|ref|XP_003340214.1| PREDICTED: ras-related protein Rab-7L1-like isoform 2
[Monodelphis domestica]
Length = 180
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 18/32 (56%), Positives = 28/32 (87%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIG 46
V++VG+ AVGK+S++QRYC+ +F+R YK T+G
Sbjct: 10 VLVVGDAAVGKTSLVQRYCQDSFSRHYKSTVG 41
>gi|260787333|ref|XP_002588708.1| RAS oncogene protein [Branchiostoma floridae]
gi|229273876|gb|EEN44719.1| RAS oncogene protein [Branchiostoma floridae]
Length = 237
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 20/23 (86%), Positives = 22/23 (95%)
Query: 25 KSSMIQRYCRGTFTRDYKKTIGV 47
KSSMIQRYC+G FT+DYKKTIGV
Sbjct: 22 KSSMIQRYCKGIFTKDYKKTIGV 44
>gi|449283615|gb|EMC90220.1| Ras-related protein Rab-23 [Columba livia]
Length = 237
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 20/23 (86%), Positives = 22/23 (95%)
Query: 25 KSSMIQRYCRGTFTRDYKKTIGV 47
KSSMIQRYC+G FT+DYKKTIGV
Sbjct: 22 KSSMIQRYCKGIFTKDYKKTIGV 44
>gi|327261405|ref|XP_003215521.1| PREDICTED: ras-related protein Rab-23-like [Anolis carolinensis]
Length = 238
Score = 48.5 bits (114), Expect = 4e-04, Method: Composition-based stats.
Identities = 20/23 (86%), Positives = 22/23 (95%)
Query: 25 KSSMIQRYCRGTFTRDYKKTIGV 47
KSSMIQRYC+G FT+DYKKTIGV
Sbjct: 22 KSSMIQRYCKGIFTKDYKKTIGV 44
>gi|348507000|ref|XP_003441045.1| PREDICTED: ras-related protein Rab-23-like [Oreochromis
niloticus]
Length = 235
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 20/23 (86%), Positives = 22/23 (95%)
Query: 25 KSSMIQRYCRGTFTRDYKKTIGV 47
KSSMIQRYC+G FT+DYKKTIGV
Sbjct: 22 KSSMIQRYCKGIFTKDYKKTIGV 44
>gi|224048591|ref|XP_002194341.1| PREDICTED: ras-related protein Rab-23 [Taeniopygia guttata]
Length = 237
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 20/23 (86%), Positives = 22/23 (95%)
Query: 25 KSSMIQRYCRGTFTRDYKKTIGV 47
KSSMIQRYC+G FT+DYKKTIGV
Sbjct: 22 KSSMIQRYCKGIFTKDYKKTIGV 44
>gi|66472226|ref|NP_001018579.1| ras-related protein Rab-23 [Danio rerio]
gi|63102386|gb|AAH95213.1| RAB23, member RAS oncogene family [Danio rerio]
gi|182889236|gb|AAI64825.1| Rab23 protein [Danio rerio]
Length = 237
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 20/23 (86%), Positives = 22/23 (95%)
Query: 25 KSSMIQRYCRGTFTRDYKKTIGV 47
KSSMIQRYC+G FT+DYKKTIGV
Sbjct: 22 KSSMIQRYCKGIFTKDYKKTIGV 44
>gi|410901324|ref|XP_003964146.1| PREDICTED: ras-related protein Rab-23-like [Takifugu rubripes]
Length = 234
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 20/23 (86%), Positives = 22/23 (95%)
Query: 25 KSSMIQRYCRGTFTRDYKKTIGV 47
KSSMIQRYC+G FT+DYKKTIGV
Sbjct: 22 KSSMIQRYCKGIFTKDYKKTIGV 44
>gi|444708600|gb|ELW49655.1| Ras-related protein Rab-36 [Tupaia chinensis]
Length = 277
Score = 48.5 bits (114), Expect = 6e-04, Method: Composition-based stats.
Identities = 22/41 (53%), Positives = 30/41 (73%), Gaps = 1/41 (2%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSMIQRY 55
VV+VG+ VGK+S+I R+C+ F RDYK TIGV I+R+
Sbjct: 60 VVVVGDLYVGKTSLIHRFCKNVFDRDYKATIGVDFE-IERF 99
Score = 36.2 bits (82), Expect = 2.2, Method: Composition-based stats.
Identities = 13/22 (59%), Positives = 17/22 (77%)
Query: 48 KSSMIQRYCRGTFTRDYKKTIG 69
K+S+I R+C+ F RDYK TIG
Sbjct: 70 KTSLIHRFCKNVFDRDYKATIG 91
>gi|390458670|ref|XP_003732159.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein Rab-36
[Callithrix jacchus]
Length = 366
Score = 48.5 bits (114), Expect = 6e-04, Method: Composition-based stats.
Identities = 22/41 (53%), Positives = 30/41 (73%), Gaps = 1/41 (2%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSMIQRY 55
VV+VG+ VGK+S+I R+C+ F RDYK TIGV I+R+
Sbjct: 126 VVVVGDLYVGKTSLIHRFCKNVFDRDYKATIGVDFE-IERF 165
Score = 36.2 bits (82), Expect = 2.2, Method: Composition-based stats.
Identities = 13/22 (59%), Positives = 17/22 (77%)
Query: 48 KSSMIQRYCRGTFTRDYKKTIG 69
K+S+I R+C+ F RDYK TIG
Sbjct: 136 KTSLIHRFCKNVFDRDYKATIG 157
>gi|355563520|gb|EHH20082.1| hypothetical protein EGK_02866 [Macaca mulatta]
Length = 333
Score = 48.5 bits (114), Expect = 6e-04, Method: Composition-based stats.
Identities = 22/41 (53%), Positives = 30/41 (73%), Gaps = 1/41 (2%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSMIQRY 55
VV+VG+ VGK+S+I R+C+ F RDYK TIGV I+R+
Sbjct: 126 VVVVGDLYVGKTSLIHRFCKNVFDRDYKATIGVDFE-IERF 165
Score = 38.1 bits (87), Expect = 0.75, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 26/50 (52%), Gaps = 6/50 (12%)
Query: 26 SSMIQRYCRGTFTRDYKKTIGV------KSSMIQRYCRGTFTRDYKKTIG 69
S+ QR GT K + V K+S+I R+C+ F RDYK TIG
Sbjct: 108 SAACQRRNTGTVGLKLSKVVVVGDLYVGKTSLIHRFCKNVFDRDYKATIG 157
>gi|348540204|ref|XP_003457578.1| PREDICTED: ras-related protein Rab-34-like [Oreochromis
niloticus]
Length = 254
Score = 48.5 bits (114), Expect = 6e-04, Method: Composition-based stats.
Identities = 19/37 (51%), Positives = 28/37 (75%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSM 51
V++VG+ AVGK+ +I R+C+G F ++YK TIGV M
Sbjct: 53 VIVVGDVAVGKTCLISRFCKGAFEKNYKATIGVDFEM 89
>gi|301788340|ref|XP_002929586.1| PREDICTED: breakpoint cluster region protein-like [Ailuropoda
melanoleuca]
Length = 1360
Score = 48.5 bits (114), Expect = 6e-04, Method: Composition-based stats.
Identities = 22/41 (53%), Positives = 30/41 (73%), Gaps = 1/41 (2%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSMIQRY 55
VV+VG+ VGK+S+I R+C+ F RDYK TIGV I+R+
Sbjct: 42 VVVVGDLYVGKTSLIHRFCKNVFDRDYKATIGVDFE-IERF 81
Score = 38.9 bits (89), Expect = 0.39, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 6/50 (12%)
Query: 26 SSMIQRYCRGTFTRDYKKTIGV------KSSMIQRYCRGTFTRDYKKTIG 69
S+ QR GT + K + V K+S+I R+C+ F RDYK TIG
Sbjct: 24 STTCQRKNTGTVGLRHSKVVVVGDLYVGKTSLIHRFCKNVFDRDYKATIG 73
>gi|13177611|gb|AAK14829.1| GTP-binding protein RAB15 [Mus musculus]
Length = 49
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/24 (87%), Positives = 23/24 (95%)
Query: 24 GKSSMIQRYCRGTFTRDYKKTIGV 47
GKSSMIQRYC+G FT+DYKKTIGV
Sbjct: 1 GKSSMIQRYCKGIFTKDYKKTIGV 24
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/22 (86%), Positives = 21/22 (95%)
Query: 48 KSSMIQRYCRGTFTRDYKKTIG 69
KSSMIQRYC+G FT+DYKKTIG
Sbjct: 2 KSSMIQRYCKGIFTKDYKKTIG 23
>gi|71663004|ref|XP_818500.1| small GTP-binding protein Rab28 [Trypanosoma cruzi strain CL
Brener]
gi|70883756|gb|EAN96649.1| small GTP-binding protein Rab28, putative [Trypanosoma cruzi]
Length = 229
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 19/33 (57%), Positives = 28/33 (84%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
++++GNGAVGK+S+I+RYC F + YK+TIGV
Sbjct: 17 IIVLGNGAVGKTSLIRRYCEDGFGQGYKQTIGV 49
>gi|407416974|gb|EKF37872.1| small GTP-binding protein Rab28, putative [Trypanosoma cruzi
marinkellei]
Length = 229
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 28/34 (82%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
+++VGNGAVGK+S+I+RYC F + YK+TIGV
Sbjct: 17 IIVVGNGAVGKTSLIRRYCEDGFGQGYKQTIGVD 50
>gi|148224010|ref|NP_001086377.1| RAB23, member RAS oncogene family [Xenopus laevis]
gi|49522135|gb|AAH75188.1| MGC82152 protein [Xenopus laevis]
Length = 238
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 20/23 (86%), Positives = 22/23 (95%)
Query: 25 KSSMIQRYCRGTFTRDYKKTIGV 47
KSSMIQRYC+G FT+DYKKTIGV
Sbjct: 22 KSSMIQRYCKGIFTKDYKKTIGV 44
>gi|355759534|gb|EHH61628.1| hypothetical protein EGM_19652 [Macaca fascicularis]
Length = 267
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 22/41 (53%), Positives = 30/41 (73%), Gaps = 1/41 (2%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSMIQRY 55
VV+VG+ VGK+S+I R+C+ F RDYK TIGV I+R+
Sbjct: 60 VVVVGDLYVGKTSLIHRFCKNVFDRDYKATIGVDFE-IERF 99
Score = 37.7 bits (86), Expect = 0.85, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 26/50 (52%), Gaps = 6/50 (12%)
Query: 26 SSMIQRYCRGTFTRDYKKTIGV------KSSMIQRYCRGTFTRDYKKTIG 69
S+ QR GT K + V K+S+I R+C+ F RDYK TIG
Sbjct: 42 SAACQRRNTGTVGLKLSKVVVVGDLYVGKTSLIHRFCKNVFDRDYKATIG 91
>gi|291225856|ref|XP_002732916.1| PREDICTED: RAS oncogene protein-like [Saccoglossus kowalevskii]
Length = 234
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 20/23 (86%), Positives = 22/23 (95%)
Query: 25 KSSMIQRYCRGTFTRDYKKTIGV 47
KSSMIQRYC+G FT+DYKKTIGV
Sbjct: 22 KSSMIQRYCKGIFTKDYKKTIGV 44
>gi|237839629|ref|XP_002369112.1| Ras family domain-containing protein [Toxoplasma gondii ME49]
gi|211966776|gb|EEB01972.1| Ras family domain-containing protein [Toxoplasma gondii ME49]
Length = 166
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/34 (61%), Positives = 26/34 (76%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
V+IVGNG VGKSS+I R+ G +T DYKKT+ V
Sbjct: 14 VIIVGNGTVGKSSLITRFSDGKYTSDYKKTLAVD 47
>gi|432904028|ref|XP_004077248.1| PREDICTED: ras-related protein Rab-23-like [Oryzias latipes]
Length = 235
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 20/23 (86%), Positives = 22/23 (95%)
Query: 25 KSSMIQRYCRGTFTRDYKKTIGV 47
KSSMIQRYC+G FT+DYKKTIGV
Sbjct: 22 KSSMIQRYCKGIFTKDYKKTIGV 44
>gi|47228917|emb|CAG09432.1| unnamed protein product [Tetraodon nigroviridis]
Length = 231
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 20/23 (86%), Positives = 22/23 (95%)
Query: 25 KSSMIQRYCRGTFTRDYKKTIGV 47
KSSMIQRYC+G FT+DYKKTIGV
Sbjct: 22 KSSMIQRYCKGIFTKDYKKTIGV 44
>gi|62858815|ref|NP_001016964.1| RAB23, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|68534683|gb|AAH98510.1| RAB23, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|89271879|emb|CAJ82246.1| RAB23, member RAS oncogene family [Xenopus (Silurana) tropicalis]
Length = 238
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 20/23 (86%), Positives = 22/23 (95%)
Query: 25 KSSMIQRYCRGTFTRDYKKTIGV 47
KSSMIQRYC+G FT+DYKKTIGV
Sbjct: 22 KSSMIQRYCKGIFTKDYKKTIGV 44
>gi|301107143|ref|XP_002902654.1| ras family GTPase, putative [Phytophthora infestans T30-4]
gi|262098528|gb|EEY56580.1| ras family GTPase, putative [Phytophthora infestans T30-4]
Length = 280
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 21/33 (63%), Positives = 26/33 (78%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
V++VGNG VGK+SM RY +G +T YKKTIGV
Sbjct: 15 VIVVGNGNVGKTSMATRYAKGRYTGTYKKTIGV 47
>gi|401404657|ref|XP_003881779.1| Zgc:56049, related [Neospora caninum Liverpool]
gi|325116192|emb|CBZ51746.1| Zgc:56049, related [Neospora caninum Liverpool]
Length = 123
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/33 (63%), Positives = 26/33 (78%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
V+IVGNG VGKSS+I R+ G +T DYKKT+ V
Sbjct: 14 VIIVGNGTVGKSSLIARFADGKYTSDYKKTLAV 46
>gi|221504691|gb|EEE30356.1| ehrabx25 protein, putative [Toxoplasma gondii VEG]
Length = 166
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/34 (61%), Positives = 26/34 (76%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
V+IVGNG VGKSS+I R+ G +T DYKKT+ V
Sbjct: 14 VIIVGNGTVGKSSLITRFSDGKYTSDYKKTLAVD 47
>gi|410976959|ref|XP_003994880.1| PREDICTED: ras-related protein Rab-36 [Felis catus]
Length = 267
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 20/33 (60%), Positives = 26/33 (78%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
VV+VG+ VGK+S+I R+C+ F RDYK TIGV
Sbjct: 60 VVVVGDLYVGKTSLIHRFCKNVFDRDYKATIGV 92
Score = 36.2 bits (82), Expect = 2.5, Method: Composition-based stats.
Identities = 13/22 (59%), Positives = 17/22 (77%)
Query: 48 KSSMIQRYCRGTFTRDYKKTIG 69
K+S+I R+C+ F RDYK TIG
Sbjct: 70 KTSLIHRFCKNVFDRDYKATIG 91
>gi|345791517|ref|XP_849544.2| PREDICTED: ras-related protein Rab-36 [Canis lupus familiaris]
Length = 337
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 20/33 (60%), Positives = 26/33 (78%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
VV+VG+ VGK+S+I R+C+ F RDYK TIGV
Sbjct: 130 VVVVGDLYVGKTSLIHRFCKNVFDRDYKATIGV 162
Score = 37.4 bits (85), Expect = 0.99, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 26/50 (52%), Gaps = 6/50 (12%)
Query: 26 SSMIQRYCRGTFTRDYKKTIGV------KSSMIQRYCRGTFTRDYKKTIG 69
S+ QR GT K + V K+S+I R+C+ F RDYK TIG
Sbjct: 112 STTCQRRNTGTVGLRLSKVVVVGDLYVGKTSLIHRFCKNVFDRDYKATIG 161
>gi|348584634|ref|XP_003478077.1| PREDICTED: ras-related protein Rab-36-like [Cavia porcellus]
Length = 267
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 20/33 (60%), Positives = 26/33 (78%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
VV+VG+ VGK+S+I R+C+ F RDYK TIGV
Sbjct: 60 VVVVGDLYVGKTSLIHRFCKNVFDRDYKATIGV 92
Score = 37.7 bits (86), Expect = 0.89, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 26/50 (52%), Gaps = 6/50 (12%)
Query: 26 SSMIQRYCRGTFTRDYKKTIGV------KSSMIQRYCRGTFTRDYKKTIG 69
S+ QR GT K + V K+S+I R+C+ F RDYK TIG
Sbjct: 42 SAACQRRNTGTVGLKLSKVVVVGDLYVGKTSLIHRFCKNVFDRDYKATIG 91
>gi|66825191|ref|XP_645950.1| Rab GTPase [Dictyostelium discoideum AX4]
gi|74897435|sp|Q55E31.1|RB32B_DICDI RecName: Full=Ras-related protein Rab-32B
gi|60474121|gb|EAL72058.1| Rab GTPase [Dictyostelium discoideum AX4]
Length = 260
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 21/37 (56%), Positives = 30/37 (81%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSM 51
V+++G+ AVGKSS+I+RYC G F+ +YK TIGV S+
Sbjct: 62 VLLIGDYAVGKSSIIKRYCTGIFSPNYKLTIGVDFSV 98
>gi|294877245|ref|XP_002767937.1| Rab6, putative [Perkinsus marinus ATCC 50983]
gi|239869971|gb|EER00655.1| Rab6, putative [Perkinsus marinus ATCC 50983]
Length = 246
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 18/33 (54%), Positives = 27/33 (81%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
V+++GNGAVGK+S+ R+C G F+ YK+TIG+
Sbjct: 29 VILIGNGAVGKTSLAHRFCDGGFSASYKQTIGL 61
>gi|195389781|ref|XP_002053552.1| GJ23289 [Drosophila virilis]
gi|194151638|gb|EDW67072.1| GJ23289 [Drosophila virilis]
Length = 276
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 20/23 (86%), Positives = 22/23 (95%)
Query: 25 KSSMIQRYCRGTFTRDYKKTIGV 47
KSSMIQRYC+G FT+DYKKTIGV
Sbjct: 53 KSSMIQRYCKGIFTKDYKKTIGV 75
>gi|221484494|gb|EEE22788.1| rab23, putative [Toxoplasma gondii GT1]
Length = 212
Score = 47.8 bits (112), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/33 (63%), Positives = 26/33 (78%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
V+IVGNG VGKSS+I R+ G +T DYKKT+ V
Sbjct: 14 VIIVGNGTVGKSSLITRFSDGKYTSDYKKTLAV 46
>gi|340054168|emb|CCC48462.1| putative small GTP-binding protein Rab28 [Trypanosoma vivax Y486]
Length = 247
Score = 47.8 bits (112), Expect = 8e-04, Method: Composition-based stats.
Identities = 19/38 (50%), Positives = 30/38 (78%)
Query: 10 SIKGTVVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
S++ V++VGN VGK+S+I+RYC F ++YK+TIG+
Sbjct: 12 SLEFKVIVVGNAGVGKTSLIRRYCETEFGQEYKQTIGL 49
>gi|196008533|ref|XP_002114132.1| hypothetical protein TRIADDRAFT_58283 [Trichoplax adhaerens]
gi|190583151|gb|EDV23222.1| hypothetical protein TRIADDRAFT_58283 [Trichoplax adhaerens]
Length = 236
Score = 47.8 bits (112), Expect = 8e-04, Method: Composition-based stats.
Identities = 20/23 (86%), Positives = 22/23 (95%)
Query: 25 KSSMIQRYCRGTFTRDYKKTIGV 47
KSSMIQRYC+G FT+DYKKTIGV
Sbjct: 22 KSSMIQRYCKGIFTKDYKKTIGV 44
>gi|4579755|dbj|BAA75195.1| small GTP-binding protein Rab36 [Homo sapiens]
gi|119579966|gb|EAW59562.1| RAB36, member RAS oncogene family, isoform CRA_b [Homo sapiens]
Length = 333
Score = 47.8 bits (112), Expect = 8e-04, Method: Composition-based stats.
Identities = 20/33 (60%), Positives = 26/33 (78%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
VV+VG+ VGK+S+I R+C+ F RDYK TIGV
Sbjct: 126 VVVVGDLYVGKTSLIHRFCKNVFDRDYKATIGV 158
Score = 37.7 bits (86), Expect = 0.98, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 26/50 (52%), Gaps = 6/50 (12%)
Query: 26 SSMIQRYCRGTFTRDYKKTIGV------KSSMIQRYCRGTFTRDYKKTIG 69
S+ QR GT K + V K+S+I R+C+ F RDYK TIG
Sbjct: 108 SAACQRRNTGTVGLKLSKVVVVGDLYVGKTSLIHRFCKNVFDRDYKATIG 157
>gi|31795535|ref|NP_004905.2| ras-related protein Rab-36 [Homo sapiens]
gi|46577679|sp|O95755.2|RAB36_HUMAN RecName: Full=Ras-related protein Rab-36
gi|6049164|gb|AAF02485.1|AF133588_1 RAB36 [Homo sapiens]
gi|47678637|emb|CAG30439.1| RAB36 [Homo sapiens]
gi|85397473|gb|AAI04990.1| RAB36, member RAS oncogene family [Homo sapiens]
gi|85397614|gb|AAI04992.1| RAB36, member RAS oncogene family [Homo sapiens]
gi|108752142|gb|AAI11853.1| RAB36 protein [synthetic construct]
gi|109451446|emb|CAK54584.1| RAB36 [synthetic construct]
gi|109452042|emb|CAK54883.1| RAB36 [synthetic construct]
gi|261857692|dbj|BAI45368.1| RAB36, member RAS oncogene family [synthetic construct]
Length = 333
Score = 47.8 bits (112), Expect = 8e-04, Method: Composition-based stats.
Identities = 20/33 (60%), Positives = 26/33 (78%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
VV+VG+ VGK+S+I R+C+ F RDYK TIGV
Sbjct: 126 VVVVGDLYVGKTSLIHRFCKNVFDRDYKATIGV 158
Score = 37.7 bits (86), Expect = 0.99, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 26/50 (52%), Gaps = 6/50 (12%)
Query: 26 SSMIQRYCRGTFTRDYKKTIGV------KSSMIQRYCRGTFTRDYKKTIG 69
S+ QR GT K + V K+S+I R+C+ F RDYK TIG
Sbjct: 108 SAACQRRNTGTVGLKLSKVVVVGDLYVGKTSLIHRFCKNVFDRDYKATIG 157
>gi|290991925|ref|XP_002678585.1| rab family small GTPase [Naegleria gruberi]
gi|284092198|gb|EFC45841.1| rab family small GTPase [Naegleria gruberi]
Length = 284
Score = 47.8 bits (112), Expect = 8e-04, Method: Composition-based stats.
Identities = 20/33 (60%), Positives = 28/33 (84%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
V++VG+ AVGK+S+I+RYC G FT +Y+ TIGV
Sbjct: 63 VLVVGDYAVGKTSLIRRYCTGEFTSNYRITIGV 95
>gi|351701816|gb|EHB04735.1| Ras-related protein Rab-36 [Heterocephalus glaber]
Length = 267
Score = 47.8 bits (112), Expect = 8e-04, Method: Composition-based stats.
Identities = 20/33 (60%), Positives = 26/33 (78%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
VV+VG+ VGK+S+I R+C+ F RDYK TIGV
Sbjct: 60 VVVVGDLYVGKTSLIHRFCKNVFDRDYKATIGV 92
Score = 37.4 bits (85), Expect = 1.0, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 26/50 (52%), Gaps = 6/50 (12%)
Query: 26 SSMIQRYCRGTFTRDYKKTIGV------KSSMIQRYCRGTFTRDYKKTIG 69
S+ QR GT K + V K+S+I R+C+ F RDYK TIG
Sbjct: 42 SAAYQRRNTGTVGLKLSKVVVVGDLYVGKTSLIHRFCKNVFDRDYKATIG 91
>gi|114685341|ref|XP_001169301.1| PREDICTED: ras-related protein Rab-36 isoform 2 [Pan troglodytes]
gi|397469599|ref|XP_003806436.1| PREDICTED: ras-related protein Rab-36 isoform 1 [Pan paniscus]
gi|410207670|gb|JAA01054.1| RAB36, member RAS oncogene family [Pan troglodytes]
Length = 333
Score = 47.8 bits (112), Expect = 8e-04, Method: Composition-based stats.
Identities = 20/33 (60%), Positives = 26/33 (78%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
VV+VG+ VGK+S+I R+C+ F RDYK TIGV
Sbjct: 126 VVVVGDLYVGKTSLIHRFCKNVFDRDYKATIGV 158
Score = 37.4 bits (85), Expect = 0.99, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 26/50 (52%), Gaps = 6/50 (12%)
Query: 26 SSMIQRYCRGTFTRDYKKTIGV------KSSMIQRYCRGTFTRDYKKTIG 69
S+ QR GT K + V K+S+I R+C+ F RDYK TIG
Sbjct: 108 SAACQRRNTGTVGLKLSKVVVVGDLYVGKTSLIHRFCKNVFDRDYKATIG 157
>gi|403294872|ref|XP_003938386.1| PREDICTED: ras-related protein Rab-7L1 isoform 2 [Saimiri
boliviensis boliviensis]
Length = 179
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 28/32 (87%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIG 46
V++VG+ AVGK+S++QRYC+ +F++ YK T+G
Sbjct: 10 VLVVGDAAVGKTSLVQRYCQDSFSKHYKSTVG 41
>gi|403295299|ref|XP_003938587.1| PREDICTED: ras-related protein Rab-36 [Saimiri boliviensis
boliviensis]
Length = 333
Score = 47.8 bits (112), Expect = 8e-04, Method: Composition-based stats.
Identities = 20/33 (60%), Positives = 26/33 (78%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
VV+VG+ VGK+S+I R+C+ F RDYK TIGV
Sbjct: 126 VVVVGDLYVGKTSLIHRFCKNVFDRDYKATIGV 158
Score = 37.4 bits (85), Expect = 1.0, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 26/50 (52%), Gaps = 6/50 (12%)
Query: 26 SSMIQRYCRGTFTRDYKKTIGV------KSSMIQRYCRGTFTRDYKKTIG 69
S+ QR GT K + V K+S+I R+C+ F RDYK TIG
Sbjct: 108 SAACQRRNTGTVGLKLSKVVVVGDLYVGKTSLIHRFCKNVFDRDYKATIG 157
>gi|149720174|ref|XP_001488539.1| PREDICTED: ras-related protein Rab-36-like [Equus caballus]
Length = 334
Score = 47.8 bits (112), Expect = 8e-04, Method: Composition-based stats.
Identities = 20/33 (60%), Positives = 26/33 (78%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
VV+VG+ VGK+S+I R+C+ F RDYK TIGV
Sbjct: 127 VVVVGDLYVGKTSLIHRFCKNVFDRDYKATIGV 159
Score = 37.4 bits (85), Expect = 1.0, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 26/50 (52%), Gaps = 6/50 (12%)
Query: 26 SSMIQRYCRGTFTRDYKKTIGV------KSSMIQRYCRGTFTRDYKKTIG 69
S+ QR GT K + V K+S+I R+C+ F RDYK TIG
Sbjct: 109 SAACQRRNTGTVGLKLSKVVVVGDLYVGKTSLIHRFCKNVFDRDYKATIG 158
>gi|449281576|gb|EMC88623.1| Ras-related protein Rab-36, partial [Columba livia]
Length = 267
Score = 47.8 bits (112), Expect = 8e-04, Method: Composition-based stats.
Identities = 22/41 (53%), Positives = 30/41 (73%), Gaps = 1/41 (2%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSMIQRY 55
VV+VG+ VGK+S+I R+C+ F RDYK TIGV I+R+
Sbjct: 60 VVVVGDLYVGKTSLINRFCKDNFDRDYKATIGVDFE-IERF 99
>gi|195107162|ref|XP_001998185.1| GI23830 [Drosophila mojavensis]
gi|193914779|gb|EDW13646.1| GI23830 [Drosophila mojavensis]
Length = 275
Score = 47.8 bits (112), Expect = 8e-04, Method: Composition-based stats.
Identities = 20/23 (86%), Positives = 22/23 (95%)
Query: 25 KSSMIQRYCRGTFTRDYKKTIGV 47
KSSMIQRYC+G FT+DYKKTIGV
Sbjct: 53 KSSMIQRYCKGIFTKDYKKTIGV 75
>gi|332263644|ref|XP_003280861.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein Rab-36
[Nomascus leucogenys]
Length = 333
Score = 47.8 bits (112), Expect = 8e-04, Method: Composition-based stats.
Identities = 20/33 (60%), Positives = 26/33 (78%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
VV+VG+ VGK+S+I R+C+ F RDYK TIGV
Sbjct: 126 VVVVGDLYVGKTSLIHRFCKNVFDRDYKATIGV 158
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 26/50 (52%), Gaps = 6/50 (12%)
Query: 26 SSMIQRYCRGTFTRDYKKTIGV------KSSMIQRYCRGTFTRDYKKTIG 69
S+ QR GT K + V K+S+I R+C+ F RDYK TIG
Sbjct: 108 SAACQRRNMGTVGLKLSKVVVVGDLYVGKTSLIHRFCKNVFDRDYKATIG 157
>gi|348681705|gb|EGZ21521.1| hypothetical protein PHYSODRAFT_387258 [Phytophthora sojae]
Length = 276
Score = 47.8 bits (112), Expect = 8e-04, Method: Composition-based stats.
Identities = 20/33 (60%), Positives = 25/33 (75%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
V++VGNG GK+SM RY +G +T YKKTIGV
Sbjct: 15 VIVVGNGNAGKTSMTTRYAKGRYTGTYKKTIGV 47
>gi|432896568|ref|XP_004076324.1| PREDICTED: ras-related protein Rab-34-like [Oryzias latipes]
Length = 273
Score = 47.8 bits (112), Expect = 9e-04, Method: Composition-based stats.
Identities = 19/37 (51%), Positives = 28/37 (75%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSM 51
V++VG+ AVGK+ +I R+C+G F ++YK TIGV M
Sbjct: 75 VIVVGDVAVGKTCLISRFCKGVFDKNYKATIGVDFEM 111
>gi|402883731|ref|XP_003905361.1| PREDICTED: ras-related protein Rab-36 [Papio anubis]
Length = 333
Score = 47.8 bits (112), Expect = 9e-04, Method: Composition-based stats.
Identities = 20/33 (60%), Positives = 26/33 (78%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
VV+VG+ VGK+S+I R+C+ F RDYK TIGV
Sbjct: 126 VVVVGDLYVGKTSLIHRFCKNVFDRDYKATIGV 158
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 26/50 (52%), Gaps = 6/50 (12%)
Query: 26 SSMIQRYCRGTFTRDYKKTIGV------KSSMIQRYCRGTFTRDYKKTIG 69
S+ QR GT K + V K+S+I R+C+ F RDYK TIG
Sbjct: 108 SAACQRRNTGTVGLKLSKVVVVGDLYVGKTSLIHRFCKNVFDRDYKATIG 157
>gi|195343771|ref|XP_002038464.1| GM10600 [Drosophila sechellia]
gi|195568527|ref|XP_002102265.1| GD19590 [Drosophila simulans]
gi|194133485|gb|EDW55001.1| GM10600 [Drosophila sechellia]
gi|194198192|gb|EDX11768.1| GD19590 [Drosophila simulans]
Length = 268
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 20/23 (86%), Positives = 22/23 (95%)
Query: 25 KSSMIQRYCRGTFTRDYKKTIGV 47
KSSMIQRYC+G FT+DYKKTIGV
Sbjct: 50 KSSMIQRYCKGIFTKDYKKTIGV 72
>gi|395861863|ref|XP_003803194.1| PREDICTED: ras-related protein Rab-36 [Otolemur garnettii]
Length = 360
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 22/41 (53%), Positives = 30/41 (73%), Gaps = 1/41 (2%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSMIQRY 55
VV+VG+ VGK+S+I R+C+ F RDYK TIGV I+R+
Sbjct: 153 VVVVGDLYVGKTSLIYRFCKNVFDRDYKATIGVDFE-IERF 192
Score = 37.0 bits (84), Expect = 1.7, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 26/50 (52%), Gaps = 6/50 (12%)
Query: 26 SSMIQRYCRGTFTRDYKKTIGV------KSSMIQRYCRGTFTRDYKKTIG 69
S+ QR GT K + V K+S+I R+C+ F RDYK TIG
Sbjct: 135 SAACQRRNTGTVGLRLSKVVVVGDLYVGKTSLIYRFCKNVFDRDYKATIG 184
>gi|440798051|gb|ELR19123.1| RAB36 member RAS oncogene family protein [Acanthamoeba
castellanii str. Neff]
Length = 273
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 20/41 (48%), Positives = 31/41 (75%), Gaps = 1/41 (2%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSMIQRY 55
V++VG+ +VGK+S+++R+C G FT YK TIGV + Q+Y
Sbjct: 59 VIVVGDHSVGKTSLVRRFCEGKFTDQYKATIGV-DFIYQKY 98
>gi|198415754|ref|XP_002121180.1| PREDICTED: similar to RAB23, member RAS oncogene family [Ciona
intestinalis]
Length = 243
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 19/22 (86%), Positives = 21/22 (95%)
Query: 26 SSMIQRYCRGTFTRDYKKTIGV 47
SSMIQRYC+G FT+DYKKTIGV
Sbjct: 23 SSMIQRYCKGIFTKDYKKTIGV 44
>gi|426393773|ref|XP_004063186.1| PREDICTED: ras-related protein Rab-36 [Gorilla gorilla gorilla]
Length = 525
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 20/33 (60%), Positives = 26/33 (78%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
VV+VG+ VGK+S+I R+C+ F RDYK TIGV
Sbjct: 318 VVVVGDLYVGKTSLIHRFCKNVFDRDYKATIGV 350
Score = 37.4 bits (85), Expect = 1.3, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 26/50 (52%), Gaps = 6/50 (12%)
Query: 26 SSMIQRYCRGTFTRDYKKTIGV------KSSMIQRYCRGTFTRDYKKTIG 69
S+ QR GT K + V K+S+I R+C+ F RDYK TIG
Sbjct: 300 SAACQRRNTGTVGLKLSKVVVVGDLYVGKTSLIHRFCKNVFDRDYKATIG 349
>gi|297708378|ref|XP_002830945.1| PREDICTED: ras-related protein Rab-36 isoform 1 [Pongo abelii]
Length = 333
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 20/33 (60%), Positives = 26/33 (78%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
VV+VG+ VGK+S+I R+C+ F RDYK TIGV
Sbjct: 126 VVVVGDLYVGKTSLIHRFCKNVFDRDYKATIGV 158
Score = 35.8 bits (81), Expect = 3.3, Method: Composition-based stats.
Identities = 13/22 (59%), Positives = 17/22 (77%)
Query: 48 KSSMIQRYCRGTFTRDYKKTIG 69
K+S+I R+C+ F RDYK TIG
Sbjct: 136 KTSLIHRFCKNVFDRDYKATIG 157
>gi|326427102|gb|EGD72672.1| hypothetical protein PTSG_04403 [Salpingoeca sp. ATCC 50818]
Length = 201
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 29/37 (78%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSM 51
V+++G+GAVGK+S+I RY GTF YKKT+GV ++
Sbjct: 13 VIVIGDGAVGKTSIISRYALGTFDEGYKKTLGVDFAL 49
>gi|443698839|gb|ELT98616.1| hypothetical protein CAPTEDRAFT_169486 [Capitella teleta]
Length = 268
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 20/32 (62%), Positives = 25/32 (78%)
Query: 16 VIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
V+VG+ AVGKS ++ R+C TF RDYK TIGV
Sbjct: 65 VLVGDVAVGKSCLVNRFCHHTFDRDYKATIGV 96
>gi|196010982|ref|XP_002115355.1| hypothetical protein TRIADDRAFT_59188 [Trichoplax adhaerens]
gi|190582126|gb|EDV22200.1| hypothetical protein TRIADDRAFT_59188 [Trichoplax adhaerens]
Length = 233
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 18/33 (54%), Positives = 27/33 (81%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
V+++G+ +VGK+S+I +YCR F +DYK TIGV
Sbjct: 49 VIVIGDVSVGKTSIINKYCRRVFDKDYKATIGV 81
>gi|410915260|ref|XP_003971105.1| PREDICTED: ras-related protein Rab-34-like [Takifugu rubripes]
Length = 245
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 19/37 (51%), Positives = 28/37 (75%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSM 51
V++VG+ AVGK+ +I R+C+G F ++YK TIGV M
Sbjct: 53 VIVVGDVAVGKTCLISRFCKGFFDKNYKATIGVDFEM 89
>gi|330792796|ref|XP_003284473.1| Rab GTPase [Dictyostelium purpureum]
gi|325085616|gb|EGC39020.1| Rab GTPase [Dictyostelium purpureum]
Length = 252
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 20/37 (54%), Positives = 30/37 (81%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSM 51
V+++G+ AVGK+S+I+RYC G F+ +YK TIGV S+
Sbjct: 54 VLLIGDYAVGKTSLIKRYCTGIFSPNYKLTIGVDFSV 90
>gi|281342607|gb|EFB18191.1| hypothetical protein PANDA_019794 [Ailuropoda melanoleuca]
Length = 230
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 20/33 (60%), Positives = 26/33 (78%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
VV+VG+ VGK+S+I R+C+ F RDYK TIGV
Sbjct: 43 VVVVGDLYVGKTSLIHRFCKNVFDRDYKATIGV 75
Score = 38.1 bits (87), Expect = 0.73, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 6/50 (12%)
Query: 26 SSMIQRYCRGTFTRDYKKTIGV------KSSMIQRYCRGTFTRDYKKTIG 69
S+ QR GT + K + V K+S+I R+C+ F RDYK TIG
Sbjct: 25 STTCQRKNTGTVGLRHSKVVVVGDLYVGKTSLIHRFCKNVFDRDYKATIG 74
>gi|21357169|ref|NP_649574.1| Rab23 [Drosophila melanogaster]
gi|7296691|gb|AAF51970.1| Rab23 [Drosophila melanogaster]
gi|21064699|gb|AAM29579.1| RH23273p [Drosophila melanogaster]
gi|220949250|gb|ACL87168.1| Rab23-PA [synthetic construct]
gi|220958386|gb|ACL91736.1| Rab23-PA [synthetic construct]
Length = 268
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/23 (86%), Positives = 22/23 (95%)
Query: 25 KSSMIQRYCRGTFTRDYKKTIGV 47
KSSMIQRYC+G FT+DYKKTIGV
Sbjct: 50 KSSMIQRYCKGIFTKDYKKTIGV 72
>gi|194898853|ref|XP_001978977.1| GG10890 [Drosophila erecta]
gi|190650680|gb|EDV47935.1| GG10890 [Drosophila erecta]
Length = 268
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/23 (86%), Positives = 22/23 (95%)
Query: 25 KSSMIQRYCRGTFTRDYKKTIGV 47
KSSMIQRYC+G FT+DYKKTIGV
Sbjct: 50 KSSMIQRYCKGIFTKDYKKTIGV 72
>gi|261328827|emb|CBH11805.1| Ras-related protein Rab-26 (Rab26), putative [Trypanosoma brucei
gambiense DAL972]
Length = 240
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 18/33 (54%), Positives = 28/33 (84%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
V++VG+GAVGK+S+I+RYC + +YK+TIG+
Sbjct: 17 VIVVGDGAVGKTSLIRRYCVADYGSNYKQTIGL 49
>gi|72390261|ref|XP_845425.1| small GTP-binding protein Rab28 [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
gi|62360595|gb|AAX81007.1| small GTP-binding protein Rab28, putative [Trypanosoma brucei]
gi|70801960|gb|AAZ11866.1| small GTP-binding protein Rab28, putative [Trypanosoma brucei
brucei strain 927/4 GUTat10.1]
Length = 240
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 18/33 (54%), Positives = 28/33 (84%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
V++VG+GAVGK+S+I+RYC + +YK+TIG+
Sbjct: 17 VIVVGDGAVGKTSLIRRYCVADYGSNYKQTIGL 49
>gi|195502070|ref|XP_002098062.1| Rab23 [Drosophila yakuba]
gi|194184163|gb|EDW97774.1| Rab23 [Drosophila yakuba]
Length = 268
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/23 (86%), Positives = 22/23 (95%)
Query: 25 KSSMIQRYCRGTFTRDYKKTIGV 47
KSSMIQRYC+G FT+DYKKTIGV
Sbjct: 50 KSSMIQRYCKGIFTKDYKKTIGV 72
>gi|194745502|ref|XP_001955227.1| GF18654 [Drosophila ananassae]
gi|190628264|gb|EDV43788.1| GF18654 [Drosophila ananassae]
Length = 270
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/23 (86%), Positives = 22/23 (95%)
Query: 25 KSSMIQRYCRGTFTRDYKKTIGV 47
KSSMIQRYC+G FT+DYKKTIGV
Sbjct: 52 KSSMIQRYCKGIFTKDYKKTIGV 74
>gi|407410164|gb|EKF32708.1| small G-protein, putative [Trypanosoma cruzi marinkellei]
Length = 230
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 22/45 (48%), Positives = 32/45 (71%), Gaps = 2/45 (4%)
Query: 4 LWVLRGSIKGTVVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
L + SIK V++VG+G VGK+SM++R+ +G F YKKTIG +
Sbjct: 2 LECVENSIK--VIVVGDGNVGKTSMLRRFVKGEFVNQYKKTIGAE 44
>gi|125775716|ref|XP_001359041.1| GA15247 [Drosophila pseudoobscura pseudoobscura]
gi|195146318|ref|XP_002014133.1| GL23019 [Drosophila persimilis]
gi|54638782|gb|EAL28184.1| GA15247 [Drosophila pseudoobscura pseudoobscura]
gi|194103076|gb|EDW25119.1| GL23019 [Drosophila persimilis]
Length = 268
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/23 (86%), Positives = 22/23 (95%)
Query: 25 KSSMIQRYCRGTFTRDYKKTIGV 47
KSSMIQRYC+G FT+DYKKTIGV
Sbjct: 50 KSSMIQRYCKGIFTKDYKKTIGV 72
>gi|195038501|ref|XP_001990695.1| GH18115 [Drosophila grimshawi]
gi|193894891|gb|EDV93757.1| GH18115 [Drosophila grimshawi]
Length = 273
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/23 (86%), Positives = 22/23 (95%)
Query: 25 KSSMIQRYCRGTFTRDYKKTIGV 47
KSSMIQRYC+G FT+DYKKTIGV
Sbjct: 49 KSSMIQRYCKGIFTKDYKKTIGV 71
>gi|189066586|dbj|BAG35836.1| unnamed protein product [Homo sapiens]
Length = 203
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 30/37 (81%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSM 51
V++VG+ AVGK+S++QRY + +F+R YK T+GV ++
Sbjct: 10 VLVVGDAAVGKTSLVQRYSQDSFSRHYKSTVGVDFAL 46
>gi|195452414|ref|XP_002073343.1| GK14081 [Drosophila willistoni]
gi|194169428|gb|EDW84329.1| GK14081 [Drosophila willistoni]
Length = 272
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/23 (86%), Positives = 22/23 (95%)
Query: 25 KSSMIQRYCRGTFTRDYKKTIGV 47
KSSMIQRYC+G FT+DYKKTIGV
Sbjct: 48 KSSMIQRYCKGIFTKDYKKTIGV 70
>gi|291412663|ref|XP_002722596.1| PREDICTED: RAB36, member RAS oncogene family [Oryctolagus
cuniculus]
Length = 267
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 20/33 (60%), Positives = 26/33 (78%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
VV+VG+ VGK+S+I R+C+ F RDYK TIGV
Sbjct: 60 VVVVGDLYVGKTSLIHRFCKNMFDRDYKATIGV 92
Score = 36.6 bits (83), Expect = 1.8, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 26/50 (52%), Gaps = 6/50 (12%)
Query: 26 SSMIQRYCRGTFTRDYKKTIGV------KSSMIQRYCRGTFTRDYKKTIG 69
S+ QR GT K + V K+S+I R+C+ F RDYK TIG
Sbjct: 42 STACQRRDTGTVGLQLSKVVVVGDLYVGKTSLIHRFCKNMFDRDYKATIG 91
>gi|326668725|ref|XP_689291.4| PREDICTED: ras-related protein Rab-44 [Danio rerio]
Length = 363
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 20/39 (51%), Positives = 28/39 (71%)
Query: 11 IKGTVVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKS 49
++ VV+VGN VGK+S I+R+ G FT DY+ TIGV +
Sbjct: 177 VQFNVVMVGNSCVGKTSFIRRFHEGQFTEDYRSTIGVDT 215
>gi|348505548|ref|XP_003440323.1| PREDICTED: ras-related protein Rab-34-like [Oreochromis
niloticus]
Length = 259
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 19/37 (51%), Positives = 28/37 (75%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSM 51
V++VG+ AVGK+ +I R+C+ TF ++YK TIGV M
Sbjct: 55 VIVVGDLAVGKTCLINRFCKDTFDKNYKATIGVDFEM 91
>gi|260820642|ref|XP_002605643.1| hypothetical protein BRAFLDRAFT_149126 [Branchiostoma floridae]
gi|229290978|gb|EEN61653.1| hypothetical protein BRAFLDRAFT_149126 [Branchiostoma floridae]
Length = 180
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 30/40 (75%), Gaps = 1/40 (2%)
Query: 16 VIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSMIQRY 55
+++G+ AVGK+ ++ R+C+ TF RDYK TIGV ++R+
Sbjct: 8 IVIGDVAVGKTCLVNRFCKDTFDRDYKATIGVDFE-VERF 46
>gi|149058657|gb|EDM09814.1| RAB7, member RAS oncogene family-like 1, isoform CRA_b [Rattus
norvegicus]
Length = 185
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 30/37 (81%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSM 51
V++VG+ AVGK+S++QRY + +F++ YK T+GV ++
Sbjct: 10 VLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGVDFAL 46
>gi|71408878|ref|XP_806815.1| small G-protein [Trypanosoma cruzi strain CL Brener]
gi|70870670|gb|EAN84964.1| small G-protein, putative [Trypanosoma cruzi]
Length = 230
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 22/45 (48%), Positives = 32/45 (71%), Gaps = 2/45 (4%)
Query: 4 LWVLRGSIKGTVVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
L + SIK V++VG+G VGK+SM++R+ +G F YKKTIG +
Sbjct: 2 LECVENSIK--VIVVGDGNVGKTSMLRRFVKGEFVNQYKKTIGAE 44
>gi|354485692|ref|XP_003505017.1| PREDICTED: ras-related protein Rab-36-like [Cricetulus griseus]
Length = 267
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 22/41 (53%), Positives = 29/41 (70%), Gaps = 1/41 (2%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSMIQRY 55
VV+VG+ VGK+S+I R C+ F RDYK TIGV I+R+
Sbjct: 60 VVVVGDLYVGKTSLIHRLCKNVFDRDYKATIGVDFE-IERF 99
>gi|344246430|gb|EGW02534.1| Breakpoint cluster region protein [Cricetulus griseus]
Length = 1193
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 22/41 (53%), Positives = 29/41 (70%), Gaps = 1/41 (2%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSMIQRY 55
VV+VG+ VGK+S+I R C+ F RDYK TIGV I+R+
Sbjct: 60 VVVVGDLYVGKTSLIHRLCKNVFDRDYKATIGVDFE-IERF 99
>gi|391337022|ref|XP_003742873.1| PREDICTED: ras and EF-hand domain-containing protein homolog
[Metaseiulus occidentalis]
Length = 571
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 20/33 (60%), Positives = 25/33 (75%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
VVIVG+ AVGKSS+I R+C+G F + TIGV
Sbjct: 388 VVIVGDSAVGKSSLINRFCQGQFVPSFNATIGV 420
>gi|342181535|emb|CCC91014.1| putative small GTP-binding protein Rab28 [Trypanosoma congolense
IL3000]
Length = 236
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 18/33 (54%), Positives = 26/33 (78%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
++++GNG VGK+S+I+RYC F YK+TIGV
Sbjct: 17 ILVLGNGGVGKTSLIRRYCSAEFAGTYKQTIGV 49
>gi|156392741|ref|XP_001636206.1| predicted protein [Nematostella vectensis]
gi|156223307|gb|EDO44143.1| predicted protein [Nematostella vectensis]
Length = 121
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 29/41 (70%), Gaps = 1/41 (2%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSMIQRY 55
+++G+ AVGK+S+I R+CR F DYK TIGV ++R+
Sbjct: 36 AIVLGDVAVGKTSLINRFCRNAFDHDYKATIGVDFE-VERF 75
>gi|157819031|ref|NP_001103059.1| ras-related protein Rab-36 [Rattus norvegicus]
gi|149043783|gb|EDL97234.1| rCG60863, isoform CRA_a [Rattus norvegicus]
gi|149043784|gb|EDL97235.1| rCG60863, isoform CRA_a [Rattus norvegicus]
gi|187469790|gb|AAI67029.1| Rab36 protein [Rattus norvegicus]
Length = 267
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 22/41 (53%), Positives = 29/41 (70%), Gaps = 1/41 (2%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSMIQRY 55
VV+VG+ VGK+S+I R C+ F RDYK TIGV I+R+
Sbjct: 60 VVVVGDLYVGKTSLIHRLCKNVFDRDYKATIGVDFE-IERF 99
>gi|38048477|gb|AAR10141.1| similar to Drosophila melanogaster CG2108, partial [Drosophila
yakuba]
Length = 106
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/23 (86%), Positives = 22/23 (95%)
Query: 25 KSSMIQRYCRGTFTRDYKKTIGV 47
KSSMIQRYC+G FT+DYKKTIGV
Sbjct: 50 KSSMIQRYCKGIFTKDYKKTIGV 72
>gi|156392743|ref|XP_001636207.1| predicted protein [Nematostella vectensis]
gi|156223308|gb|EDO44144.1| predicted protein [Nematostella vectensis]
Length = 221
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 18/32 (56%), Positives = 25/32 (78%)
Query: 16 VIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
+++G+ AVGK+S+I R+CR F DYK TIGV
Sbjct: 37 IVLGDVAVGKTSLINRFCRNAFDHDYKATIGV 68
>gi|71652330|ref|XP_814824.1| small G-protein [Trypanosoma cruzi strain CL Brener]
gi|3452220|gb|AAC32778.1| small G-protein [Trypanosoma cruzi]
gi|70879830|gb|EAN92973.1| small G-protein, putative [Trypanosoma cruzi]
Length = 229
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 22/45 (48%), Positives = 32/45 (71%), Gaps = 2/45 (4%)
Query: 4 LWVLRGSIKGTVVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
L + SIK V++VG+G VGK+SM++R+ +G F YKKTIG +
Sbjct: 2 LECVENSIK--VIVVGDGNVGKTSMLRRFVKGEFVNQYKKTIGAE 44
>gi|407852049|gb|EKG05716.1| small GTP-binding protein Rab28, putative [Trypanosoma cruzi]
Length = 229
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 27/34 (79%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
+++VGNG VGK+S+I+RYC F + YK+TIGV
Sbjct: 17 IIVVGNGTVGKTSLIRRYCEDGFGQGYKQTIGVD 50
>gi|51859426|gb|AAH81732.1| Rab7l1 protein [Rattus norvegicus]
Length = 167
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 30/37 (81%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSM 51
V++VG+ AVGK+S++QRY + +F++ YK T+GV ++
Sbjct: 10 VLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGVDFAL 46
>gi|407849599|gb|EKG04298.1| small G-protein, putative [Trypanosoma cruzi]
Length = 317
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 22/45 (48%), Positives = 32/45 (71%), Gaps = 2/45 (4%)
Query: 4 LWVLRGSIKGTVVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
L + SIK V++VG+G VGK+SM++R+ +G F YKKTIG +
Sbjct: 89 LECVENSIK--VIVVGDGNVGKTSMLRRFVKGEFVNQYKKTIGAE 131
>gi|71665398|ref|XP_819669.1| small GTP-binding protein Rab28 [Trypanosoma cruzi strain CL
Brener]
gi|70884981|gb|EAN97818.1| small GTP-binding protein Rab28, putative [Trypanosoma cruzi]
Length = 229
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 27/34 (79%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
+++VGNG VGK+S+I+RYC F + YK+TIGV
Sbjct: 17 IIVVGNGTVGKTSLIRRYCEDGFGQGYKQTIGVD 50
>gi|241652325|ref|XP_002410387.1| RAB-23, putative [Ixodes scapularis]
gi|215501615|gb|EEC11109.1| RAB-23, putative [Ixodes scapularis]
Length = 233
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 23/38 (60%), Positives = 25/38 (65%)
Query: 25 KSSMIQRYCRGTFTRDYKKTIGVKSSMIQRYCRGTFTR 62
KSS+IQRYC+G FT DYKKTIGV Q RG R
Sbjct: 22 KSSLIQRYCKGVFTADYKKTIGVDFLERQLSLRGEDVR 59
>gi|440893578|gb|ELR46289.1| Ras-related protein Rab-7L1, partial [Bos grunniens mutus]
Length = 209
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 28/33 (84%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
V++VG+ AVGK+S++QRY + +F++ YK T+GV
Sbjct: 16 VLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGV 48
>gi|344236706|gb|EGV92809.1| Solute carrier family 45 member 3 [Cricetulus griseus]
Length = 1319
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 20/46 (43%), Positives = 34/46 (73%), Gaps = 3/46 (6%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK---SSMIQRYCR 57
V++VG+ AVGK+S++QRY + +F++ YK T+G + +SM + Y R
Sbjct: 475 VLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGGQERFTSMTRLYYR 520
>gi|395838749|ref|XP_003792270.1| PREDICTED: ras-related protein Rab-7L1 [Otolemur garnettii]
Length = 204
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 28/33 (84%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
V++VG+ AVGK+S++QRY + +F++ YK T+GV
Sbjct: 10 VLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGV 42
>gi|149944729|ref|NP_001092564.1| ras-related protein Rab-7L1 [Bos taurus]
gi|426239399|ref|XP_004013609.1| PREDICTED: ras-related protein Rab-7L1 isoform 1 [Ovis aries]
gi|148745251|gb|AAI42253.1| RAB7L1 protein [Bos taurus]
gi|296479392|tpg|DAA21507.1| TPA: RAB7, member RAS oncogene family-like 1 [Bos taurus]
Length = 203
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 28/33 (84%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
V++VG+ AVGK+S++QRY + +F++ YK T+GV
Sbjct: 10 VLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGV 42
>gi|444706397|gb|ELW47739.1| Ras-related protein Rab-7L1 [Tupaia chinensis]
Length = 204
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 28/33 (84%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
V++VG+ AVGK+S++QRY + +F++ YK T+GV
Sbjct: 10 VLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGV 42
>gi|74227833|dbj|BAE35734.1| unnamed protein product [Mus musculus]
Length = 445
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 18/37 (48%), Positives = 28/37 (75%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSM 51
V++VG+ +VGK+ +I R+C+ TF ++YK TIGV M
Sbjct: 241 VIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDFEM 277
>gi|444518337|gb|ELV12099.1| Ras-related protein Rab-34 [Tupaia chinensis]
Length = 324
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 18/37 (48%), Positives = 28/37 (75%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSM 51
V++VG+ +VGK+ +I R+C+ TF ++YK TIGV M
Sbjct: 56 VIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDFEM 92
>gi|441661188|ref|XP_004091484.1| PREDICTED: ras-related protein Rab-34 [Nomascus leucogenys]
Length = 259
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 18/37 (48%), Positives = 28/37 (75%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSM 51
V++VG+ +VGK+ +I R+C+ TF ++YK TIGV M
Sbjct: 55 VIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDFEM 91
>gi|432096068|gb|ELK26936.1| Ras-related protein Rab-34 [Myotis davidii]
Length = 582
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 18/37 (48%), Positives = 28/37 (75%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSM 51
V++VG+ +VGK+ +I R+C+ TF ++YK TIGV M
Sbjct: 48 VIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDFEM 84
>gi|431892885|gb|ELK03313.1| Ras-related protein Rab-7L1 [Pteropus alecto]
Length = 203
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 28/33 (84%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
V++VG+ AVGK+S++QRY + +F++ YK T+GV
Sbjct: 10 VLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGV 42
>gi|431890968|gb|ELK01847.1| Ras-related protein Rab-34 [Pteropus alecto]
Length = 229
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 18/37 (48%), Positives = 28/37 (75%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSM 51
V++VG+ +VGK+ +I R+C+ TF ++YK TIGV M
Sbjct: 56 VIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDFEM 92
>gi|30584833|gb|AAP36669.1| Homo sapiens RAB34, member RAS oncogene family [synthetic
construct]
gi|61370005|gb|AAX43426.1| RAB34 member RAS oncogene family [synthetic construct]
Length = 252
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 18/37 (48%), Positives = 28/37 (75%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSM 51
V++VG+ +VGK+ +I R+C+ TF ++YK TIGV M
Sbjct: 55 VIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDFEM 91
>gi|222144317|ref|NP_001138414.1| ras-related protein Rab-34 isoform 4 [Homo sapiens]
gi|16877141|gb|AAH16841.1| RAB34 protein [Homo sapiens]
gi|30582243|gb|AAP35348.1| RAB34, member RAS oncogene family [Homo sapiens]
gi|61360135|gb|AAX41817.1| RAB34 member RAS oncogene family [synthetic construct]
gi|119571512|gb|EAW51127.1| RAB34, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|123994161|gb|ABM84682.1| RAB34, member RAS oncogene family [synthetic construct]
gi|124126869|gb|ABM92207.1| RAB34, member RAS oncogene family [synthetic construct]
Length = 251
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 18/37 (48%), Positives = 28/37 (75%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSM 51
V++VG+ +VGK+ +I R+C+ TF ++YK TIGV M
Sbjct: 55 VIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDFEM 91
>gi|12963387|gb|AAK11241.1|AF327929_1 small GTPase Rah [Mus musculus]
Length = 259
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 18/37 (48%), Positives = 28/37 (75%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSM 51
V++VG+ +VGK+ +I R+C+ TF ++YK TIGV M
Sbjct: 55 VIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDFEM 91
>gi|73967018|ref|XP_868242.1| PREDICTED: ras-related protein Rab-34 isoform 2 [Canis lupus
familiaris]
Length = 259
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 18/37 (48%), Positives = 28/37 (75%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSM 51
V++VG+ +VGK+ +I R+C+ TF ++YK TIGV M
Sbjct: 55 VIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDFEM 91
>gi|75812920|ref|NP_001028784.1| ras-related protein Rab-34 [Bos taurus]
gi|73587147|gb|AAI03396.1| RAB34, member RAS oncogene family [Bos taurus]
Length = 267
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 18/37 (48%), Positives = 28/37 (75%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSM 51
V++VG+ +VGK+ +I R+C+ TF ++YK TIGV M
Sbjct: 55 VIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDFEM 91
>gi|58865850|ref|NP_001012140.1| ras-related protein Rab-34 [Rattus norvegicus]
gi|81883442|sp|Q5U1Y1.1|RAB34_RAT RecName: Full=Ras-related protein Rab-34
gi|55562768|gb|AAH86400.1| RAB34, member RAS oncogene family [Rattus norvegicus]
Length = 259
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 18/37 (48%), Positives = 28/37 (75%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSM 51
V++VG+ +VGK+ +I R+C+ TF ++YK TIGV M
Sbjct: 55 VIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDFEM 91
>gi|4587775|gb|AAD25874.1| GTP-binding protein rah [Bos taurus]
Length = 236
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 18/37 (48%), Positives = 28/37 (75%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSM 51
V++VG+ +VGK+ +I R+C+ TF ++YK TIGV M
Sbjct: 4 VIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDFEM 40
>gi|31560774|ref|NP_258436.2| ras-related protein Rab-34 [Mus musculus]
gi|226958650|ref|NP_001152954.1| ras-related protein Rab-34 [Mus musculus]
gi|23491737|dbj|BAC16803.1| Rab family small GTPase Rah [Mus musculus]
gi|24047252|gb|AAH38638.1| RAB34, member of RAS oncogene family [Mus musculus]
gi|112293029|dbj|BAF02892.1| Rab34 [Mus musculus]
Length = 259
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 18/37 (48%), Positives = 28/37 (75%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSM 51
V++VG+ +VGK+ +I R+C+ TF ++YK TIGV M
Sbjct: 55 VIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDFEM 91
>gi|222144311|ref|NP_114140.4| ras-related protein Rab-34 isoform 1 [Homo sapiens]
gi|372266171|ref|NP_001243206.1| ras-related protein Rab-34 isoform 1 [Homo sapiens]
gi|297700370|ref|XP_002827220.1| PREDICTED: ras-related protein Rab-34 isoform 3 [Pongo abelii]
gi|332848217|ref|XP_003315606.1| PREDICTED: ras-related protein Rab-34 isoform 1 [Pan troglodytes]
gi|397483076|ref|XP_003812731.1| PREDICTED: ras-related protein Rab-34 isoform 1 [Pan paniscus]
gi|426348891|ref|XP_004042055.1| PREDICTED: ras-related protein Rab-34 isoform 1 [Gorilla gorilla
gorilla]
gi|20139693|sp|Q9BZG1.1|RAB34_HUMAN RecName: Full=Ras-related protein Rab-34; AltName:
Full=Ras-related protein Rab-39; AltName:
Full=Ras-related protein Rah
gi|12958665|gb|AAK09397.1|AF322067_1 RAB39 [Homo sapiens]
gi|14041910|dbj|BAB55034.1| unnamed protein product [Homo sapiens]
gi|18073358|emb|CAC81760.1| GTP-binding protein rah [Homo sapiens]
gi|60551670|gb|AAH91510.1| RAB34, member RAS oncogene family [Homo sapiens]
gi|119571513|gb|EAW51128.1| RAB34, member RAS oncogene family, isoform CRA_b [Homo sapiens]
gi|119571515|gb|EAW51130.1| RAB34, member RAS oncogene family, isoform CRA_b [Homo sapiens]
Length = 259
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 18/37 (48%), Positives = 28/37 (75%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSM 51
V++VG+ +VGK+ +I R+C+ TF ++YK TIGV M
Sbjct: 55 VIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDFEM 91
>gi|410980333|ref|XP_003996532.1| PREDICTED: ras-related protein Rab-34 isoform 4 [Felis catus]
Length = 308
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 18/37 (48%), Positives = 28/37 (75%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSM 51
V++VG+ +VGK+ +I R+C+ TF ++YK TIGV M
Sbjct: 112 VIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDFEM 148
>gi|410980327|ref|XP_003996529.1| PREDICTED: ras-related protein Rab-34 isoform 1 [Felis catus]
gi|410980329|ref|XP_003996530.1| PREDICTED: ras-related protein Rab-34 isoform 2 [Felis catus]
Length = 259
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 18/37 (48%), Positives = 28/37 (75%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSM 51
V++VG+ +VGK+ +I R+C+ TF ++YK TIGV M
Sbjct: 55 VIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDFEM 91
>gi|403279901|ref|XP_003931481.1| PREDICTED: ras-related protein Rab-34 isoform 4 [Saimiri
boliviensis boliviensis]
Length = 308
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 18/37 (48%), Positives = 28/37 (75%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSM 51
V++VG+ +VGK+ +I R+C+ TF ++YK TIGV M
Sbjct: 112 VIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDFEM 148
>gi|403279895|ref|XP_003931478.1| PREDICTED: ras-related protein Rab-34 isoform 1 [Saimiri
boliviensis boliviensis]
gi|403279897|ref|XP_003931479.1| PREDICTED: ras-related protein Rab-34 isoform 2 [Saimiri
boliviensis boliviensis]
Length = 259
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 18/37 (48%), Positives = 28/37 (75%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSM 51
V++VG+ +VGK+ +I R+C+ TF ++YK TIGV M
Sbjct: 55 VIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDFEM 91
>gi|395849134|ref|XP_003797190.1| PREDICTED: ras-related protein Rab-34 isoform 1 [Otolemur
garnettii]
Length = 259
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 18/37 (48%), Positives = 28/37 (75%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSM 51
V++VG+ +VGK+ +I R+C+ TF ++YK TIGV M
Sbjct: 55 VIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDFEM 91
>gi|395748734|ref|XP_003778823.1| PREDICTED: ras-related protein Rab-34 [Pongo abelii]
Length = 259
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 18/37 (48%), Positives = 28/37 (75%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSM 51
V++VG+ +VGK+ +I R+C+ TF ++YK TIGV M
Sbjct: 55 VIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDFEM 91
>gi|395536178|ref|XP_003770097.1| PREDICTED: ras-related protein Rab-34 [Sarcophilus harrisii]
Length = 372
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 18/37 (48%), Positives = 28/37 (75%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSM 51
V++VG+ +VGK+ +I R+C+ TF ++YK TIGV M
Sbjct: 168 VIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDFEM 204
>gi|372266173|ref|NP_001243207.1| ras-related protein Rab-34 isoform 7 [Homo sapiens]
gi|397483080|ref|XP_003812733.1| PREDICTED: ras-related protein Rab-34 isoform 3 [Pan paniscus]
gi|410051655|ref|XP_003953136.1| PREDICTED: ras-related protein Rab-34 [Pan troglodytes]
gi|426348895|ref|XP_004042057.1| PREDICTED: ras-related protein Rab-34 isoform 3 [Gorilla gorilla
gorilla]
Length = 259
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 18/37 (48%), Positives = 28/37 (75%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSM 51
V++VG+ +VGK+ +I R+C+ TF ++YK TIGV M
Sbjct: 55 VIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDFEM 91
>gi|355714902|gb|AES05155.1| RAB34, member RAS oncoprotein family [Mustela putorius furo]
Length = 271
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 18/37 (48%), Positives = 28/37 (75%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSM 51
V++VG+ +VGK+ +I R+C+ TF ++YK TIGV M
Sbjct: 68 VIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDFEM 104
>gi|351710399|gb|EHB13318.1| Ras-related protein Rab-34 [Heterocephalus glaber]
Length = 321
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 18/37 (48%), Positives = 28/37 (75%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSM 51
V++VG+ +VGK+ +I R+C+ TF ++YK TIGV M
Sbjct: 91 VIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDFEM 127
>gi|348567647|ref|XP_003469610.1| PREDICTED: ras-related protein Rab-34-like [Cavia porcellus]
Length = 496
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 18/37 (48%), Positives = 28/37 (75%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSM 51
V++VG+ +VGK+ +I R+C+ TF ++YK TIGV M
Sbjct: 292 VIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDFEM 328
>gi|345309236|ref|XP_001520847.2| PREDICTED: ras-related protein Rab-34-like [Ornithorhynchus
anatinus]
Length = 255
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 18/37 (48%), Positives = 28/37 (75%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSM 51
V++VG+ +VGK+ +I R+C+ TF ++YK TIGV M
Sbjct: 45 VIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDFEM 81
>gi|334324628|ref|XP_003340541.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein Rab-34-like
[Monodelphis domestica]
Length = 253
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 18/37 (48%), Positives = 28/37 (75%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSM 51
V++VG+ +VGK+ +I R+C+ TF ++YK TIGV M
Sbjct: 55 VIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDFEM 91
>gi|441661195|ref|XP_004091485.1| PREDICTED: ras-related protein Rab-34 [Nomascus leucogenys]
Length = 268
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 18/37 (48%), Positives = 28/37 (75%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSM 51
V++VG+ +VGK+ +I R+C+ TF ++YK TIGV M
Sbjct: 113 VIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDFEM 149
>gi|332256138|ref|XP_003277174.1| PREDICTED: ras-related protein Rab-34 isoform 4 [Nomascus
leucogenys]
Length = 308
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 18/37 (48%), Positives = 28/37 (75%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSM 51
V++VG+ +VGK+ +I R+C+ TF ++YK TIGV M
Sbjct: 112 VIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDFEM 148
>gi|332256134|ref|XP_003277172.1| PREDICTED: ras-related protein Rab-34 isoform 2 [Nomascus
leucogenys]
Length = 316
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 18/37 (48%), Positives = 28/37 (75%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSM 51
V++VG+ +VGK+ +I R+C+ TF ++YK TIGV M
Sbjct: 112 VIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDFEM 148
>gi|332256132|ref|XP_003277171.1| PREDICTED: ras-related protein Rab-34 isoform 1 [Nomascus
leucogenys]
Length = 259
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 18/37 (48%), Positives = 28/37 (75%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSM 51
V++VG+ +VGK+ +I R+C+ TF ++YK TIGV M
Sbjct: 55 VIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDFEM 91
>gi|301753058|ref|XP_002912366.1| PREDICTED: ras-related protein Rab-34-like [Ailuropoda melanoleuca]
Length = 322
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 18/37 (48%), Positives = 28/37 (75%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSM 51
V++VG+ +VGK+ +I R+C+ TF ++YK TIGV M
Sbjct: 118 VIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDFEM 154
>gi|297700368|ref|XP_002827219.1| PREDICTED: ras-related protein Rab-34 isoform 2 [Pongo abelii]
Length = 308
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 18/37 (48%), Positives = 28/37 (75%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSM 51
V++VG+ +VGK+ +I R+C+ TF ++YK TIGV M
Sbjct: 112 VIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDFEM 148
>gi|297700366|ref|XP_002827218.1| PREDICTED: ras-related protein Rab-34 isoform 1 [Pongo abelii]
Length = 316
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 18/37 (48%), Positives = 28/37 (75%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSM 51
V++VG+ +VGK+ +I R+C+ TF ++YK TIGV M
Sbjct: 112 VIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDFEM 148
>gi|281350543|gb|EFB26127.1| hypothetical protein PANDA_000110 [Ailuropoda melanoleuca]
Length = 259
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 18/37 (48%), Positives = 28/37 (75%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSM 51
V++VG+ +VGK+ +I R+C+ TF ++YK TIGV M
Sbjct: 55 VIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDFEM 91
>gi|229608951|ref|NP_659124.2| ras-related protein Rab-7L1 [Mus musculus]
Length = 204
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 28/33 (84%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
V++VG+ AVGK+S++QRY + +F++ YK T+GV
Sbjct: 10 VLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGV 42
>gi|222144319|ref|NP_001138415.1| ras-related protein Rab-34 isoform 5 [Homo sapiens]
gi|332848219|ref|XP_511360.3| PREDICTED: ras-related protein Rab-34 isoform 5 [Pan troglodytes]
gi|397483078|ref|XP_003812732.1| PREDICTED: ras-related protein Rab-34 isoform 2 [Pan paniscus]
gi|426348893|ref|XP_004042056.1| PREDICTED: ras-related protein Rab-34 isoform 2 [Gorilla gorilla
gorilla]
Length = 316
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 18/37 (48%), Positives = 28/37 (75%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSM 51
V++VG+ +VGK+ +I R+C+ TF ++YK TIGV M
Sbjct: 112 VIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDFEM 148
>gi|222144315|ref|NP_001136097.2| ras-related protein Rab-34 isoform 3 [Homo sapiens]
gi|332848225|ref|XP_003315609.1| PREDICTED: ras-related protein Rab-34 isoform 4 [Pan troglodytes]
gi|426348901|ref|XP_004042060.1| PREDICTED: ras-related protein Rab-34 isoform 6 [Gorilla gorilla
gorilla]
Length = 268
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 18/37 (48%), Positives = 28/37 (75%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSM 51
V++VG+ +VGK+ +I R+C+ TF ++YK TIGV M
Sbjct: 113 VIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDFEM 149
>gi|222144313|ref|NP_001136096.2| ras-related protein Rab-34 isoform 2 [Homo sapiens]
gi|332848223|ref|XP_003315608.1| PREDICTED: ras-related protein Rab-34 isoform 3 [Pan troglodytes]
gi|397483084|ref|XP_003812735.1| PREDICTED: ras-related protein Rab-34 isoform 5 [Pan paniscus]
gi|426348899|ref|XP_004042059.1| PREDICTED: ras-related protein Rab-34 isoform 5 [Gorilla gorilla
gorilla]
Length = 308
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 18/37 (48%), Positives = 28/37 (75%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSM 51
V++VG+ +VGK+ +I R+C+ TF ++YK TIGV M
Sbjct: 112 VIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDFEM 148
>gi|194388428|dbj|BAG60182.1| unnamed protein product [Homo sapiens]
Length = 274
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 18/37 (48%), Positives = 28/37 (75%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSM 51
V++VG+ +VGK+ +I R+C+ TF ++YK TIGV M
Sbjct: 78 VIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDFEM 114
>gi|119571514|gb|EAW51129.1| RAB34, member RAS oncogene family, isoform CRA_c [Homo sapiens]
Length = 273
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 18/37 (48%), Positives = 28/37 (75%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSM 51
V++VG+ +VGK+ +I R+C+ TF ++YK TIGV M
Sbjct: 55 VIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDFEM 91
>gi|178056534|ref|NP_001116650.1| ras-related protein Rab-34 [Sus scrofa]
gi|118573264|sp|Q06AU4.1|RAB34_PIG RecName: Full=Ras-related protein Rab-34
gi|115394764|gb|ABI97176.1| RAB34 [Sus scrofa]
Length = 259
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 18/37 (48%), Positives = 28/37 (75%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSM 51
V++VG+ +VGK+ +I R+C+ TF ++YK TIGV M
Sbjct: 55 VIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDFEM 91
>gi|44890418|gb|AAH66904.1| RAB34 protein [Homo sapiens]
Length = 259
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 18/37 (48%), Positives = 28/37 (75%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSM 51
V++VG+ +VGK+ +I R+C+ TF ++YK TIGV M
Sbjct: 55 VIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDFEM 91
>gi|20141805|sp|Q64008.2|RAB34_MOUSE RecName: Full=Ras-related protein Rab-34; AltName:
Full=Ras-related homolog; AltName: Full=Ras-related
protein Rab-39; AltName: Full=Ras-related protein Rah
gi|12958667|gb|AAK09398.1|AF322068_1 RAB39 [Mus musculus]
Length = 259
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 18/37 (48%), Positives = 28/37 (75%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSM 51
V++VG+ +VGK+ +I R+C+ TF ++YK TIGV M
Sbjct: 55 VIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDFEM 91
>gi|355714977|gb|AES05183.1| RAB7, member RAS oncoprotein family-like 1 [Mustela putorius
furo]
Length = 202
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 28/33 (84%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
V++VG+ AVGK+S++QRY + +F++ YK T+GV
Sbjct: 10 VLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGV 42
>gi|350539958|ref|NP_001233234.1| uncharacterized protein LOC100653492 [Xenopus laevis]
gi|213625370|gb|AAI70451.1| Unknown (protein for MGC:197178) [Xenopus laevis]
Length = 264
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 21/40 (52%), Positives = 29/40 (72%), Gaps = 1/40 (2%)
Query: 16 VIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSMIQRY 55
V+VG+ VGK+S+I R+C+ F RDYK TIGV I+R+
Sbjct: 58 VMVGDLYVGKTSLINRFCKNVFDRDYKATIGVDFE-IERF 96
Score = 36.2 bits (82), Expect = 2.5, Method: Composition-based stats.
Identities = 13/22 (59%), Positives = 17/22 (77%)
Query: 48 KSSMIQRYCRGTFTRDYKKTIG 69
K+S+I R+C+ F RDYK TIG
Sbjct: 67 KTSLINRFCKNVFDRDYKATIG 88
>gi|47221819|emb|CAG08873.1| unnamed protein product [Tetraodon nigroviridis]
Length = 244
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 18/37 (48%), Positives = 28/37 (75%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSM 51
V++VG+ +VGK+ +I R+C+G F ++YK TIGV M
Sbjct: 38 VIVVGDVSVGKTCLISRFCKGFFEKNYKATIGVDFEM 74
>gi|51316505|sp|Q91YQ1.1|RAB7L_MOUSE RecName: Full=Ras-related protein Rab-7L1; AltName:
Full=Rab-7-like protein 1
gi|16359355|gb|AAH16133.1| RAB7, member RAS oncogene family-like 1 [Mus musculus]
gi|20809768|gb|AAH29056.1| RAB7, member RAS oncogene family-like 1 [Mus musculus]
gi|112293019|dbj|BAF02887.1| Rab29 [Mus musculus]
gi|148707749|gb|EDL39696.1| RAB7, member RAS oncogene family-like 1, isoform CRA_a [Mus
musculus]
Length = 204
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 28/33 (84%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
V++VG+ AVGK+S++QRY + +F++ YK T+GV
Sbjct: 10 VLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGV 42
>gi|431914365|gb|ELK15623.1| Ras-related protein Rab-36 [Pteropus alecto]
Length = 313
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 21/41 (51%), Positives = 29/41 (70%), Gaps = 1/41 (2%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSMIQRY 55
VV+VG+ VGK+S+I R+C+ F DYK TIGV I+R+
Sbjct: 60 VVVVGDLYVGKTSLIHRFCKNVFDHDYKATIGVDFE-IERF 99
>gi|297461658|ref|XP_596500.4| PREDICTED: ras-related protein Rab-36 [Bos taurus]
gi|297485029|ref|XP_002694743.1| PREDICTED: ras-related protein Rab-36 [Bos taurus]
gi|296478355|tpg|DAA20470.1| TPA: RAB36, member RAS oncogene family-like [Bos taurus]
Length = 328
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 21/41 (51%), Positives = 29/41 (70%), Gaps = 1/41 (2%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSMIQRY 55
VV+VG+ VGK+S+I R+C+ F DYK TIGV I+R+
Sbjct: 60 VVVVGDLYVGKTSLIHRFCKNVFDHDYKATIGVDFE-IERF 99
>gi|240986|gb|AAB20669.1| LMW G-protein [Mus sp.]
gi|228517|prf||1805246A low molecular weight GTP-binding protein
Length = 208
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 28/37 (75%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSM 51
V++VG+ +VGK+ +I R+C+ TF ++YK TIGV M
Sbjct: 4 VIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDFEM 40
>gi|19424290|ref|NP_598274.1| ras-related protein Rab-7L1 [Rattus norvegicus]
gi|81910561|sp|Q63481.1|RAB7L_RAT RecName: Full=Ras-related protein Rab-7L1; AltName:
Full=Rab-7-like protein 1; AltName: Full=Ras-related
protein Rab-29
gi|1235593|emb|CAA65444.1| GTPase [Rattus norvegicus]
gi|149058655|gb|EDM09812.1| RAB7, member RAS oncogene family-like 1, isoform CRA_a [Rattus
norvegicus]
gi|149058656|gb|EDM09813.1| RAB7, member RAS oncogene family-like 1, isoform CRA_a [Rattus
norvegicus]
Length = 204
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 28/33 (84%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
V++VG+ AVGK+S++QRY + +F++ YK T+GV
Sbjct: 10 VLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGV 42
>gi|354503613|ref|XP_003513875.1| PREDICTED: ras-related protein Rab-34-like isoform 1 [Cricetulus
griseus]
gi|354503615|ref|XP_003513876.1| PREDICTED: ras-related protein Rab-34-like isoform 2 [Cricetulus
griseus]
gi|344258445|gb|EGW14549.1| Ras-related protein Rab-34 [Cricetulus griseus]
Length = 259
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 18/37 (48%), Positives = 28/37 (75%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSM 51
V++VG+ +VGK+ +I R+C+ TF ++YK TIGV M
Sbjct: 55 VIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDFEM 91
>gi|291402521|ref|XP_002717602.1| PREDICTED: RAB7, member RAS oncogene family-like 1 isoform 1
[Oryctolagus cuniculus]
Length = 204
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 28/33 (84%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
V++VG+ AVGK+S++QRY + +F++ YK T+GV
Sbjct: 10 VLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGV 42
>gi|15667941|gb|AAL05587.1|AF327350_1 Ras-related GTP-binding protein RAB39 [Homo sapiens]
Length = 211
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 28/37 (75%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSM 51
V++VG+ +VGK+ +I R+C+ TF ++YK TIGV M
Sbjct: 56 VIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDFEM 92
>gi|157119872|ref|XP_001659548.1| rab23 [Aedes aegypti]
gi|108883132|gb|EAT47357.1| AAEL001524-PA [Aedes aegypti]
Length = 223
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 17/23 (73%), Positives = 22/23 (95%)
Query: 25 KSSMIQRYCRGTFTRDYKKTIGV 47
K+SM+QRYC+G +T+DYKKTIGV
Sbjct: 22 KTSMVQRYCKGIYTKDYKKTIGV 44
>gi|335295264|ref|XP_003357447.1| PREDICTED: ras-related protein Rab-7L1-like isoform 1 [Sus
scrofa]
gi|335295266|ref|XP_003357448.1| PREDICTED: ras-related protein Rab-7L1-like isoform 2 [Sus
scrofa]
gi|335295268|ref|XP_003357449.1| PREDICTED: ras-related protein Rab-7L1-like isoform 3 [Sus
scrofa]
Length = 203
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 28/33 (84%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
V++VG+ AVGK+S++QRY + +F++ YK T+GV
Sbjct: 10 VLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGV 42
>gi|296230574|ref|XP_002760764.1| PREDICTED: ras-related protein Rab-7L1 isoform 1 [Callithrix
jacchus]
Length = 203
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 28/33 (84%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
V++VG+ AVGK+S++QRY + +F++ YK T+GV
Sbjct: 10 VLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGV 42
>gi|281208325|gb|EFA82501.1| Rab GTPase [Polysphondylium pallidum PN500]
Length = 218
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 18/33 (54%), Positives = 28/33 (84%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
++++G+ AVGK+S+I+RYC G F+ +YK TIGV
Sbjct: 16 ILVIGDYAVGKTSIIKRYCTGMFSPNYKLTIGV 48
>gi|149707806|ref|XP_001490786.1| PREDICTED: ras-related protein Rab-7L1-like isoform 1 [Equus
caballus]
Length = 203
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 28/33 (84%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
V++VG+ AVGK+S++QRY + +F++ YK T+GV
Sbjct: 10 VLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGV 42
>gi|354478103|ref|XP_003501255.1| PREDICTED: ras-related protein Rab-7L1-like [Cricetulus griseus]
Length = 204
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 28/34 (82%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
V++VG+ AVGK+S++QRY + +F++ YK T+GV
Sbjct: 10 VLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGVD 43
>gi|296476829|tpg|DAA18944.1| TPA: Ras-related protein RAB34 [Bos taurus]
Length = 209
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 28/37 (75%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSM 51
V++VG+ +VGK+ +I R+C+ TF ++YK TIGV M
Sbjct: 55 VIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDFEM 91
>gi|344277036|ref|XP_003410311.1| PREDICTED: ras-related protein Rab-7L1-like isoform 1 [Loxodonta
africana]
Length = 204
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 28/33 (84%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
V++VG+ AVGK+S++QRY + +F++ YK T+GV
Sbjct: 10 VLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGV 42
>gi|60834171|gb|AAX37082.1| RAB7 member RAS oncogene family-like 1 [synthetic construct]
Length = 204
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 30/37 (81%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSM 51
V++VG+ AVGK+S++QRY + +F++ YK T+GV ++
Sbjct: 10 VLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGVDFAL 46
>gi|312373862|gb|EFR21537.1| hypothetical protein AND_16894 [Anopheles darlingi]
Length = 224
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 17/23 (73%), Positives = 22/23 (95%)
Query: 25 KSSMIQRYCRGTFTRDYKKTIGV 47
K+SM+QRYC+G +T+DYKKTIGV
Sbjct: 22 KTSMVQRYCKGIYTKDYKKTIGV 44
>gi|55731507|emb|CAH92465.1| hypothetical protein [Pongo abelii]
Length = 203
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 30/37 (81%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSM 51
V++VG+ AVGK+S++QRY + +F++ YK T+GV ++
Sbjct: 10 VLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGVDFAL 46
>gi|351710940|gb|EHB13859.1| Ras-related protein Rab-7L1 [Heterocephalus glaber]
Length = 204
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 28/33 (84%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
V++VG+ AVGK+S++QRY + +F++ YK T+GV
Sbjct: 10 VLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGV 42
>gi|4506375|ref|NP_003920.1| ras-related protein Rab-7L1 isoform 1 [Homo sapiens]
gi|197101399|ref|NP_001126387.1| ras-related protein Rab-7L1 [Pongo abelii]
gi|208609962|ref|NP_001129134.1| ras-related protein Rab-7L1 isoform 1 [Homo sapiens]
gi|114572136|ref|XP_001162514.1| PREDICTED: uncharacterized protein LOC469654 isoform 4 [Pan
troglodytes]
gi|332248154|ref|XP_003273227.1| PREDICTED: ras-related protein Rab-7L1 isoform 1 [Nomascus
leucogenys]
gi|332248156|ref|XP_003273228.1| PREDICTED: ras-related protein Rab-7L1 isoform 2 [Nomascus
leucogenys]
gi|332811507|ref|XP_001162387.2| PREDICTED: uncharacterized protein LOC469654 isoform 1 [Pan
troglodytes]
gi|397504834|ref|XP_003822985.1| PREDICTED: ras-related protein Rab-7L1 [Pan paniscus]
gi|397504836|ref|XP_003822986.1| PREDICTED: ras-related protein Rab-7L1 [Pan paniscus]
gi|13633364|sp|O14966.1|RAB7L_HUMAN RecName: Full=Ras-related protein Rab-7L1; AltName:
Full=Rab-7-like protein 1
gi|75054849|sp|Q5R7A4.1|RAB7L_PONAB RecName: Full=Ras-related protein Rab-7L1; AltName:
Full=Rab-7-like protein 1
gi|2388544|dbj|BAA22160.1| small GTP-binding protein [Homo sapiens]
gi|12803517|gb|AAH02585.1| RAB7, member RAS oncogene family-like 1 [Homo sapiens]
gi|49456973|emb|CAG46807.1| RAB7L1 [Homo sapiens]
gi|54695950|gb|AAV38347.1| RAB7, member RAS oncogene family-like 1 [Homo sapiens]
gi|55731284|emb|CAH92356.1| hypothetical protein [Pongo abelii]
gi|61357258|gb|AAX41360.1| RAB7 member RAS oncogene family-like 1 [synthetic construct]
gi|119611986|gb|EAW91580.1| RAB7, member RAS oncogene family-like 1, isoform CRA_a [Homo
sapiens]
gi|119611987|gb|EAW91581.1| RAB7, member RAS oncogene family-like 1, isoform CRA_a [Homo
sapiens]
gi|123982028|gb|ABM82843.1| RAB7, member RAS oncogene family-like 1 [synthetic construct]
gi|124000657|gb|ABM87837.1| RAB7, member RAS oncogene family-like 1 [synthetic construct]
gi|157928318|gb|ABW03455.1| RAB7, member RAS oncogene family-like 1 [synthetic construct]
gi|261859934|dbj|BAI46489.1| RAB7, member RAS oncogene family-like 1 [synthetic construct]
gi|410211350|gb|JAA02894.1| RAB7, member RAS oncogene family-like 1 [Pan troglodytes]
gi|410211352|gb|JAA02895.1| RAB7, member RAS oncogene family-like 1 [Pan troglodytes]
gi|410211354|gb|JAA02896.1| RAB7, member RAS oncogene family-like 1 [Pan troglodytes]
gi|410211356|gb|JAA02897.1| RAB7, member RAS oncogene family-like 1 [Pan troglodytes]
gi|410211358|gb|JAA02898.1| RAB7, member RAS oncogene family-like 1 [Pan troglodytes]
gi|410211360|gb|JAA02899.1| RAB7, member RAS oncogene family-like 1 [Pan troglodytes]
gi|410211362|gb|JAA02900.1| RAB7, member RAS oncogene family-like 1 [Pan troglodytes]
gi|410256832|gb|JAA16383.1| RAB7, member RAS oncogene family-like 1 [Pan troglodytes]
gi|410256834|gb|JAA16384.1| RAB7, member RAS oncogene family-like 1 [Pan troglodytes]
gi|410256836|gb|JAA16385.1| RAB7, member RAS oncogene family-like 1 [Pan troglodytes]
gi|410256838|gb|JAA16386.1| RAB7, member RAS oncogene family-like 1 [Pan troglodytes]
gi|410287094|gb|JAA22147.1| RAB7, member RAS oncogene family-like 1 [Pan troglodytes]
gi|410287096|gb|JAA22148.1| RAB7, member RAS oncogene family-like 1 [Pan troglodytes]
gi|410287098|gb|JAA22149.1| RAB7, member RAS oncogene family-like 1 [Pan troglodytes]
gi|410287100|gb|JAA22150.1| RAB7, member RAS oncogene family-like 1 [Pan troglodytes]
gi|410287102|gb|JAA22151.1| RAB7, member RAS oncogene family-like 1 [Pan troglodytes]
gi|410329207|gb|JAA33550.1| RAB7, member RAS oncogene family-like 1 [Pan troglodytes]
gi|410329209|gb|JAA33551.1| RAB7, member RAS oncogene family-like 1 [Pan troglodytes]
gi|410329211|gb|JAA33552.1| RAB7, member RAS oncogene family-like 1 [Pan troglodytes]
Length = 203
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 30/37 (81%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSM 51
V++VG+ AVGK+S++QRY + +F++ YK T+GV ++
Sbjct: 10 VLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGVDFAL 46
>gi|417408674|gb|JAA50877.1| Putative gtpase rab6/ypt6/ryh1 small g protein superfamily,
partial [Desmodus rotundus]
Length = 210
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 28/37 (75%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSM 51
V++VG+ +VGK+ +I R+C+ TF ++YK TIGV M
Sbjct: 6 VIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDFEM 42
>gi|432116090|gb|ELK37217.1| Ras-related protein Rab-7L1 [Myotis davidii]
Length = 203
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 30/37 (81%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSM 51
V++VG+ AVGK+S++QRY + +F++ YK T+GV ++
Sbjct: 10 VLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGVDFAL 46
>gi|417397029|gb|JAA45548.1| Putative gtp-binding protein-like ras superfamily [Desmodus
rotundus]
Length = 203
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 30/37 (81%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSM 51
V++VG+ AVGK+S++QRY + +F++ YK T+GV ++
Sbjct: 10 VLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGVDFAL 46
>gi|13346429|gb|AAK19735.1|AF345336_2 small G-protein [Trypanosoma cruzi]
Length = 94
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 32/45 (71%), Gaps = 2/45 (4%)
Query: 4 LWVLRGSIKGTVVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
L + SIK V++VG+G VGK+SM++R+ +G F YKKTIG +
Sbjct: 2 LECVENSIK--VIVVGDGNVGKTSMLRRFVKGEFVNQYKKTIGAE 44
>gi|386781459|ref|NP_001247882.1| ras-related protein Rab-7L1 [Macaca mulatta]
gi|402857442|ref|XP_003893264.1| PREDICTED: ras-related protein Rab-7L1 [Papio anubis]
gi|402857444|ref|XP_003893265.1| PREDICTED: ras-related protein Rab-7L1 [Papio anubis]
gi|355558842|gb|EHH15622.1| hypothetical protein EGK_01737 [Macaca mulatta]
gi|355745985|gb|EHH50610.1| hypothetical protein EGM_01467 [Macaca fascicularis]
gi|380786041|gb|AFE64896.1| ras-related protein Rab-7L1 isoform 1 [Macaca mulatta]
gi|383411345|gb|AFH28886.1| ras-related protein Rab-7L1 isoform 1 [Macaca mulatta]
Length = 203
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 28/33 (84%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
V++VG+ AVGK+S++QRY + +F++ YK T+GV
Sbjct: 10 VLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGV 42
>gi|89269845|emb|CAJ82561.1| RAB36, member RAS oncogene family [Xenopus (Silurana) tropicalis]
Length = 223
Score = 45.8 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 19/32 (59%), Positives = 25/32 (78%)
Query: 16 VIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
V+VG+ VGK+S+I R+C+ F RDYK TIGV
Sbjct: 58 VMVGDLYVGKTSLINRFCKNVFDRDYKATIGV 89
Score = 35.8 bits (81), Expect = 2.9, Method: Composition-based stats.
Identities = 13/22 (59%), Positives = 17/22 (77%)
Query: 48 KSSMIQRYCRGTFTRDYKKTIG 69
K+S+I R+C+ F RDYK TIG
Sbjct: 67 KTSLINRFCKNVFDRDYKATIG 88
>gi|149053506|gb|EDM05323.1| rCG33118, isoform CRA_a [Rattus norvegicus]
Length = 123
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 28/37 (75%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSM 51
V++VG+ +VGK+ +I R+C+ TF ++YK TIGV M
Sbjct: 55 VIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDFEM 91
>gi|301786128|ref|XP_002928478.1| PREDICTED: ras-related protein Rab-7L1-like isoform 1 [Ailuropoda
melanoleuca]
gi|281339455|gb|EFB15039.1| hypothetical protein PANDA_018438 [Ailuropoda melanoleuca]
Length = 203
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 28/33 (84%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
V++VG+ AVGK+S++QRY + +F++ YK T+GV
Sbjct: 10 VLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGV 42
>gi|395531196|ref|XP_003767668.1| PREDICTED: ras-related protein Rab-7L1 isoform 1 [Sarcophilus
harrisii]
Length = 204
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 30/37 (81%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSM 51
V++VG+ AVGK+S++QRY + +F++ YK T+GV ++
Sbjct: 10 VLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGVDFAL 46
>gi|170054181|ref|XP_001863008.1| GTP-binding protein YPTM1 [Culex quinquefasciatus]
gi|167874528|gb|EDS37911.1| GTP-binding protein YPTM1 [Culex quinquefasciatus]
Length = 223
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 17/23 (73%), Positives = 22/23 (95%)
Query: 25 KSSMIQRYCRGTFTRDYKKTIGV 47
K+SM+QRYC+G +T+DYKKTIGV
Sbjct: 22 KTSMVQRYCKGIYTKDYKKTIGV 44
>gi|426237210|ref|XP_004012554.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein Rab-34 [Ovis
aries]
Length = 319
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 18/37 (48%), Positives = 28/37 (75%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSM 51
V++VG+ +VGK+ +I R+C+ TF ++YK TIGV M
Sbjct: 115 VIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDFEM 151
>gi|158288058|ref|XP_309942.4| AGAP011565-PA [Anopheles gambiae str. PEST]
gi|157019291|gb|EAA05694.4| AGAP011565-PA [Anopheles gambiae str. PEST]
Length = 226
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 17/23 (73%), Positives = 22/23 (95%)
Query: 25 KSSMIQRYCRGTFTRDYKKTIGV 47
K+SM+QRYC+G +T+DYKKTIGV
Sbjct: 36 KTSMVQRYCKGIYTKDYKKTIGV 58
>gi|55742330|ref|NP_001006769.1| Ras-related protein RAB34 [Xenopus (Silurana) tropicalis]
gi|49523178|gb|AAH75563.1| RAB34, member RAS oncogene family [Xenopus (Silurana) tropicalis]
Length = 259
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 18/37 (48%), Positives = 28/37 (75%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSM 51
V++VG+ +VGK+ +I R+C+ TF ++YK TIGV M
Sbjct: 55 VIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDFEM 91
>gi|338711068|ref|XP_001504213.2| PREDICTED: LOW QUALITY PROTEIN: ras-related protein Rab-34-like
[Equus caballus]
Length = 316
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 18/37 (48%), Positives = 28/37 (75%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSM 51
V++VG+ +VGK+ +I R+C+ TF ++YK TIGV M
Sbjct: 112 VIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDFEM 148
>gi|22760296|dbj|BAC11141.1| unnamed protein product [Homo sapiens]
Length = 259
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 17/37 (45%), Positives = 28/37 (75%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSM 51
+++VG+ +VGK+ +I R+C+ TF ++YK TIGV M
Sbjct: 55 IIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDFEM 91
>gi|402899141|ref|XP_003912562.1| PREDICTED: ras-related protein Rab-34 isoform 4 [Papio anubis]
Length = 274
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 17/37 (45%), Positives = 28/37 (75%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSM 51
+++VG+ +VGK+ +I R+C+ TF ++YK TIGV M
Sbjct: 78 IIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDFEM 114
>gi|402899135|ref|XP_003912559.1| PREDICTED: ras-related protein Rab-34 isoform 1 [Papio anubis]
gi|402899137|ref|XP_003912560.1| PREDICTED: ras-related protein Rab-34 isoform 2 [Papio anubis]
gi|355568361|gb|EHH24642.1| hypothetical protein EGK_08335 [Macaca mulatta]
gi|355753865|gb|EHH57830.1| hypothetical protein EGM_07557 [Macaca fascicularis]
Length = 259
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 17/37 (45%), Positives = 28/37 (75%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSM 51
+++VG+ +VGK+ +I R+C+ TF ++YK TIGV M
Sbjct: 55 IIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDFEM 91
>gi|297272228|ref|XP_002800389.1| PREDICTED: ras-related protein Rab-34-like isoform 2 [Macaca
mulatta]
gi|297272230|ref|XP_001109102.2| PREDICTED: ras-related protein Rab-34-like isoform 1 [Macaca
mulatta]
gi|90085571|dbj|BAE91526.1| unnamed protein product [Macaca fascicularis]
Length = 260
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 17/37 (45%), Positives = 28/37 (75%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSM 51
+++VG+ +VGK+ +I R+C+ TF ++YK TIGV M
Sbjct: 56 IIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDFEM 92
>gi|47028277|gb|AAT09071.1| RAS related GTP binding protein [Bigelowiella natans]
Length = 210
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 30/37 (81%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSM 51
V++VG+ AVGK+S+IQRY +F +DYK TIGV+ ++
Sbjct: 9 VLVVGDVAVGKTSIIQRYTNDSFRKDYKTTIGVEFAL 45
>gi|343471771|emb|CCD15884.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 236
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 17/33 (51%), Positives = 26/33 (78%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
++++GNG VGK+S+I+RYC F Y++TIGV
Sbjct: 17 ILVLGNGGVGKTSLIRRYCSAEFAGTYRQTIGV 49
>gi|340383365|ref|XP_003390188.1| PREDICTED: ras-related protein Rab-23-like [Amphimedon
queenslandica]
Length = 242
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 19/24 (79%), Positives = 23/24 (95%)
Query: 24 GKSSMIQRYCRGTFTRDYKKTIGV 47
GKSSMI+RYC+G +T+DYKKTIGV
Sbjct: 21 GKSSMIRRYCKGVYTQDYKKTIGV 44
>gi|410986335|ref|XP_003999466.1| PREDICTED: ras-related protein Rab-7L1 isoform 1 [Felis catus]
Length = 203
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 29/37 (78%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSM 51
V++VG+ AVGK+S++QRY + +F + YK T+GV ++
Sbjct: 10 VLVVGDAAVGKTSLVQRYSQDSFNKHYKSTVGVDFAL 46
>gi|432889795|ref|XP_004075365.1| PREDICTED: ras-related protein Rab-34-like isoform 1 [Oryzias
latipes]
Length = 260
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 18/37 (48%), Positives = 27/37 (72%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSM 51
V++VG+ AVGK+ +I R+C+ F ++YK TIGV M
Sbjct: 56 VIVVGDLAVGKTCLINRFCKDAFDKNYKATIGVDFEM 92
>gi|149053507|gb|EDM05324.1| rCG33118, isoform CRA_b [Rattus norvegicus]
Length = 172
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 28/37 (75%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSM 51
V++VG+ +VGK+ +I R+C+ TF ++YK TIGV M
Sbjct: 55 VIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDFEM 91
>gi|47227805|emb|CAG08968.1| unnamed protein product [Tetraodon nigroviridis]
Length = 312
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 18/37 (48%), Positives = 27/37 (72%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSM 51
V++VG+ AVGK+ +I R+C+ F ++YK TIGV M
Sbjct: 55 VIVVGDLAVGKTCLINRFCKDVFDKNYKATIGVDFEM 91
>gi|198431173|ref|XP_002122116.1| PREDICTED: similar to RAB34, member RAS oncogene family [Ciona
intestinalis]
Length = 269
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 16/33 (48%), Positives = 27/33 (81%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
++I+G+ +VGK+S++ R+C+ F +DYK TIGV
Sbjct: 61 MIIIGDVSVGKTSLVNRFCKKAFDKDYKATIGV 93
>gi|410910222|ref|XP_003968589.1| PREDICTED: ras-related protein Rab-34-like [Takifugu rubripes]
Length = 259
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 18/37 (48%), Positives = 27/37 (72%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSM 51
V++VG+ AVGK+ +I R+C+ F ++YK TIGV M
Sbjct: 55 VIVVGDLAVGKTCLINRFCKDVFDKNYKATIGVDFEM 91
>gi|340375417|ref|XP_003386231.1| PREDICTED: ras-related protein Rab-13-like [Amphimedon
queenslandica]
Length = 221
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 18/33 (54%), Positives = 26/33 (78%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
+++VG+ VGKSS+I+R+C GT+T D TIGV
Sbjct: 14 IILVGDNGVGKSSIIRRFCEGTYTHDMDTTIGV 46
>gi|242013254|ref|XP_002427327.1| GTP-binding nuclear protein RAN1, putative [Pediculus humanus
corporis]
gi|212511676|gb|EEB14589.1| GTP-binding nuclear protein RAN1, putative [Pediculus humanus
corporis]
Length = 202
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 27/37 (72%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSM 51
V+I+G+ VGK+S +QRY T+ RDYK T+GV ++
Sbjct: 21 VIIIGDPTVGKTSFVQRYVENTYKRDYKGTVGVDFAL 57
>gi|157877830|ref|XP_001687213.1| putative small G-protein [Leishmania major strain Friedlin]
gi|68130288|emb|CAJ09600.1| putative small G-protein [Leishmania major strain Friedlin]
Length = 297
Score = 44.7 bits (104), Expect = 0.006, Method: Composition-based stats.
Identities = 17/34 (50%), Positives = 26/34 (76%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
V++VG+G VGK+ M++R+ RG F Y+KTIG +
Sbjct: 11 VIVVGDGNVGKTCMLRRFVRGDFVEQYRKTIGAE 44
>gi|71748054|ref|XP_823082.1| small GTPase [Trypanosoma brucei brucei strain 927/4 GUTat10.1]
gi|70832750|gb|EAN78254.1| small GTPase, putative [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
Length = 226
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 32/42 (76%), Gaps = 1/42 (2%)
Query: 8 RGSIKGT-VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
RG + G V+++G+G VGKSS+++R+ GTF+ Y +T+GV+
Sbjct: 4 RGGLNGVKVIVIGDGNVGKSSLLRRFVTGTFSNQYNRTVGVE 45
>gi|154346666|ref|XP_001569270.1| putative small G-protein [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134066612|emb|CAM44410.1| putative small G-protein [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 299
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 33/50 (66%), Gaps = 2/50 (4%)
Query: 10 SIKGTVVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSMIQRYCRGT 59
SIK V++VG+G VGK+S++ R+ +G F Y+KTIG + + + R T
Sbjct: 7 SIK--VIVVGDGNVGKTSLLHRFVKGYFIDQYRKTIGAEFMEMDVFLRST 54
>gi|74005894|ref|XP_536104.2| PREDICTED: ras-related protein Rab-7L1 isoform 1 [Canis lupus
familiaris]
Length = 203
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 29/37 (78%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSM 51
V++VG+ AVGK+S++QRY + +F + YK T+GV ++
Sbjct: 10 VLVVGDAAVGKTSLVQRYSQDSFQQHYKSTVGVDFAL 46
>gi|336171924|ref|YP_004579062.1| small GTP-binding protein [Lacinutrix sp. 5H-3-7-4]
gi|334726496|gb|AEH00634.1| small GTP-binding protein [Lacinutrix sp. 5H-3-7-4]
Length = 163
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 27/37 (72%)
Query: 11 IKGTVVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
I +V++G+ VGKSS+I+R+ TFT DYK TIGV
Sbjct: 3 ISKKIVLLGHFGVGKSSLIRRFVENTFTEDYKVTIGV 39
>gi|54400690|ref|NP_001006094.1| ras-related protein Rab-34 [Danio rerio]
gi|53734612|gb|AAH83224.1| RAB34, member RAS oncogene family [Danio rerio]
gi|182891158|gb|AAI63990.1| Rab34 protein [Danio rerio]
Length = 260
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 18/37 (48%), Positives = 27/37 (72%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSM 51
V++VG+ AVGK+ +I R+C+ F ++YK TIGV M
Sbjct: 56 VIVVGDLAVGKTCLINRFCKDVFDKNYKATIGVDFEM 92
>gi|440895792|gb|ELR47894.1| Ras-related protein Rab-36, partial [Bos grunniens mutus]
Length = 269
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 19/33 (57%), Positives = 25/33 (75%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
VV+VG+ VGK+S+I R+C+ F DYK TIGV
Sbjct: 62 VVVVGDLYVGKTSLIHRFCKNVFDHDYKATIGV 94
>gi|146102517|ref|XP_001469355.1| putative small G-protein [Leishmania infantum JPCM5]
gi|134073725|emb|CAM72462.1| putative small G-protein [Leishmania infantum JPCM5]
Length = 296
Score = 44.7 bits (104), Expect = 0.008, Method: Composition-based stats.
Identities = 17/34 (50%), Positives = 26/34 (76%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
V++VG+G VGK+ M++R+ RG F Y+KTIG +
Sbjct: 11 VIVVGDGNVGKTCMLRRFVRGDFVEQYRKTIGAE 44
>gi|321458347|gb|EFX69417.1| hypothetical protein DAPPUDRAFT_62315 [Daphnia pulex]
Length = 240
Score = 44.7 bits (104), Expect = 0.008, Method: Composition-based stats.
Identities = 17/33 (51%), Positives = 25/33 (75%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
V+++GN AVGKS ++ R+C F ++YK TIGV
Sbjct: 53 VIVLGNVAVGKSCLVNRFCHSVFDQNYKATIGV 85
>gi|12857898|dbj|BAB31140.1| unnamed protein product [Mus musculus]
Length = 169
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 28/41 (68%), Gaps = 1/41 (2%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSMIQRY 55
VV+VG+ VGK+S+I R C+ F DYK TIGV I+R+
Sbjct: 60 VVVVGDLYVGKTSLIHRLCKNVFDHDYKATIGVDFE-IERF 99
>gi|2623647|gb|AAB86482.1| rab-like GTP-binding protein [Entamoeba histolytica]
Length = 219
Score = 44.3 bits (103), Expect = 0.008, Method: Composition-based stats.
Identities = 16/33 (48%), Positives = 27/33 (81%)
Query: 17 IVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKS 49
++G+ VGK+++IQR+C GT+T DY TIG+++
Sbjct: 30 LIGDVGVGKTALIQRFCFGTYTEDYDATIGIET 62
Score = 35.8 bits (81), Expect = 3.5, Method: Composition-based stats.
Identities = 15/26 (57%), Positives = 21/26 (80%), Gaps = 1/26 (3%)
Query: 45 IGV-KSSMIQRYCRGTFTRDYKKTIG 69
+GV K+++IQR+C GT+T DY TIG
Sbjct: 34 VGVGKTALIQRFCFGTYTEDYDATIG 59
>gi|62898760|dbj|BAD97234.1| RAB7, member RAS oncogene family-like 1 variant [Homo sapiens]
Length = 203
Score = 44.3 bits (103), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 29/37 (78%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSM 51
V++VG+ AVGK+S +QRY + +F++ YK T+GV ++
Sbjct: 10 VLVVGDAAVGKTSPVQRYSQDSFSKHYKSTVGVDFAL 46
>gi|432095010|gb|ELK26399.1| Ras-related protein Rab-36 [Myotis davidii]
Length = 413
Score = 44.3 bits (103), Expect = 0.008, Method: Composition-based stats.
Identities = 20/40 (50%), Positives = 28/40 (70%), Gaps = 1/40 (2%)
Query: 16 VIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSMIQRY 55
V+VG+ VGK+S+I R+C+ F DYK TIGV I+R+
Sbjct: 158 VVVGDLHVGKTSLIHRFCKNVFDHDYKATIGVDFE-IERF 196
>gi|449280941|gb|EMC88156.1| Ras-related protein Rab-7L1, partial [Columba livia]
Length = 169
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 27/37 (72%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSM 51
V++VG+ VGK+S++QRY +F R YK T+GV ++
Sbjct: 10 VLVVGDATVGKTSLVQRYANDSFNRHYKSTVGVDFAL 46
>gi|58037473|ref|NP_084057.1| ras-related protein Rab-36 [Mus musculus]
gi|81914196|sp|Q8CAM5.1|RAB36_MOUSE RecName: Full=Ras-related protein Rab-36
gi|26332567|dbj|BAC30001.1| unnamed protein product [Mus musculus]
gi|74193394|dbj|BAE20653.1| unnamed protein product [Mus musculus]
gi|74206391|dbj|BAE24917.1| unnamed protein product [Mus musculus]
gi|111600487|gb|AAI19095.1| Rab36 protein [Mus musculus]
gi|111600689|gb|AAI19099.1| RAB36, member RAS oncogene family [Mus musculus]
gi|112293033|dbj|BAF02894.1| Rab36 [Mus musculus]
gi|148699984|gb|EDL31931.1| RAB36, member RAS oncogene family, isoform CRA_a [Mus musculus]
gi|148699985|gb|EDL31932.1| RAB36, member RAS oncogene family, isoform CRA_a [Mus musculus]
gi|148699987|gb|EDL31934.1| RAB36, member RAS oncogene family, isoform CRA_a [Mus musculus]
Length = 267
Score = 44.3 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 21/41 (51%), Positives = 28/41 (68%), Gaps = 1/41 (2%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSMIQRY 55
VV+VG+ VGK+S+I R C+ F DYK TIGV I+R+
Sbjct: 60 VVVVGDLYVGKTSLIHRLCKNVFDHDYKATIGVDFE-IERF 99
>gi|398025204|ref|XP_003865763.1| small G-protein, putative [Leishmania donovani]
gi|322504000|emb|CBZ39087.1| small G-protein, putative [Leishmania donovani]
Length = 296
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 17/34 (50%), Positives = 26/34 (76%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
V++VG+G VGK+ M++R+ RG F Y+KTIG +
Sbjct: 11 VIVVGDGNVGKTCMLRRFVRGDFVEQYRKTIGAE 44
>gi|426239401|ref|XP_004013610.1| PREDICTED: ras-related protein Rab-7L1 isoform 2 [Ovis aries]
Length = 179
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 27/32 (84%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIG 46
V++VG+ AVGK+S++QRY + +F++ YK T+G
Sbjct: 10 VLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVG 41
>gi|345313971|ref|XP_003429449.1| PREDICTED: ras-related protein Rab-7L1-like, partial
[Ornithorhynchus anatinus]
Length = 41
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 27/32 (84%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIG 46
V++VG+ AVGK+S++QRY + +F++ YK T+G
Sbjct: 10 VLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVG 41
>gi|118722332|ref|NP_001073128.1| ras-related protein Rab-36 [Danio rerio]
gi|118341409|gb|AAI27571.1| RAB36, member RAS oncogene family [Danio rerio]
Length = 262
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 20/40 (50%), Positives = 28/40 (70%), Gaps = 1/40 (2%)
Query: 16 VIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSMIQRY 55
V+VG+ VGK+ +I R+C+ F RDYK TIGV I+R+
Sbjct: 59 VVVGDLNVGKTCLINRFCKDVFERDYKATIGVDFE-IERF 97
>gi|390362529|ref|XP_797032.3| PREDICTED: ras-related protein Rab-34-like [Strongylocentrotus
purpuratus]
Length = 171
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 29/41 (70%), Gaps = 1/41 (2%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSMIQRY 55
V++VG+ +VGK+ ++ R+C F RDYK TIGV ++R+
Sbjct: 53 VIVVGDVSVGKTCLVNRFCHEVFDRDYKATIGVDFE-VERF 92
>gi|54696028|gb|AAV38386.1| RAB7, member RAS oncogene family-like 1 [synthetic construct]
gi|61367282|gb|AAX42976.1| RAB7 member RAS oncogene family-like 1 [synthetic construct]
Length = 204
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 27/32 (84%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIG 46
V++VG+ AVGK+S++QRY + +F++ YK T+G
Sbjct: 10 VLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVG 41
>gi|118102410|ref|XP_417967.2| PREDICTED: ras-related protein Rab-7L1 [Gallus gallus]
Length = 205
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 27/37 (72%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSM 51
V++VG+ VGK+S++QRY +F R YK T+GV ++
Sbjct: 10 VLVVGDATVGKTSLVQRYANDSFNRHYKSTVGVDFAL 46
>gi|308321632|gb|ADO27967.1| ras-related protein rab-36 [Ictalurus furcatus]
Length = 262
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 20/40 (50%), Positives = 28/40 (70%), Gaps = 1/40 (2%)
Query: 16 VIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSMIQRY 55
V+VG+ VGK+ +I R+C+ F RDYK TIGV I+R+
Sbjct: 59 VVVGDLNVGKTCLINRFCKDAFDRDYKATIGVDFE-IERF 97
>gi|291402523|ref|XP_002717603.1| PREDICTED: RAB7, member RAS oncogene family-like 1 isoform 2
[Oryctolagus cuniculus]
Length = 180
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 27/32 (84%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIG 46
V++VG+ AVGK+S++QRY + +F++ YK T+G
Sbjct: 10 VLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVG 41
>gi|167383990|ref|XP_001736769.1| small GTPase rabh [Entamoeba dispar SAW760]
gi|165900735|gb|EDR26980.1| small GTPase rabh, putative [Entamoeba dispar SAW760]
Length = 198
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 27/33 (81%)
Query: 17 IVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKS 49
++G+ VGK+++IQR+C GT+T DY TIG+++
Sbjct: 9 LIGDVGVGKTALIQRFCFGTYTEDYDATIGIET 41
Score = 35.0 bits (79), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 15/26 (57%), Positives = 21/26 (80%), Gaps = 1/26 (3%)
Query: 45 IGV-KSSMIQRYCRGTFTRDYKKTIG 69
+GV K+++IQR+C GT+T DY TIG
Sbjct: 13 VGVGKTALIQRFCFGTYTEDYDATIG 38
>gi|67472941|ref|XP_652258.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|56469082|gb|EAL46872.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|449704975|gb|EMD45121.1| Rab family gtpase [Entamoeba histolytica KU27]
Length = 198
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 27/33 (81%)
Query: 17 IVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKS 49
++G+ VGK+++IQR+C GT+T DY TIG+++
Sbjct: 9 LIGDVGVGKTALIQRFCFGTYTEDYDATIGIET 41
Score = 35.0 bits (79), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 15/26 (57%), Positives = 21/26 (80%), Gaps = 1/26 (3%)
Query: 45 IGV-KSSMIQRYCRGTFTRDYKKTIG 69
+GV K+++IQR+C GT+T DY TIG
Sbjct: 13 VGVGKTALIQRFCFGTYTEDYDATIG 38
>gi|317575773|ref|NP_001187597.1| ras-related protein Rab-36 [Ictalurus punctatus]
gi|308323460|gb|ADO28866.1| ras-related protein rab-36 [Ictalurus punctatus]
Length = 262
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 20/40 (50%), Positives = 28/40 (70%), Gaps = 1/40 (2%)
Query: 16 VIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSMIQRY 55
V+VG+ VGK+ +I R+C+ F RDYK TIGV I+R+
Sbjct: 59 VVVGDLNVGKTCLINRFCKDAFDRDYKATIGVDFE-IERF 97
>gi|117939059|dbj|BAF36683.1| Small G Protein RAB [Dinenympha exilis]
Length = 186
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 26/34 (76%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
V++VG+ VGK+S+IQRY F+R+YK TIGV
Sbjct: 4 VLVVGDLGVGKTSLIQRYVHNIFSREYKATIGVD 37
>gi|405965375|gb|EKC30753.1| WD repeat-containing protein 82 [Crassostrea gigas]
Length = 517
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 18/37 (48%), Positives = 26/37 (70%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSM 51
V+I+G+ VGK+S +QRY + RDYK TIGV ++
Sbjct: 313 VIIIGDPTVGKTSFVQRYVNDAYRRDYKMTIGVDFAL 349
>gi|117939049|dbj|BAF36678.1| Small G Protein RAB [Pyrsonympha grandis]
Length = 183
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 26/34 (76%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
V++VG+ VGK+S+IQRY F+R+YK TIGV
Sbjct: 4 VLVVGDLGVGKTSLIQRYVHNIFSREYKATIGVD 37
>gi|344277038|ref|XP_003410312.1| PREDICTED: ras-related protein Rab-7L1-like isoform 2 [Loxodonta
africana]
Length = 180
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 27/32 (84%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIG 46
V++VG+ AVGK+S++QRY + +F++ YK T+G
Sbjct: 10 VLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVG 41
>gi|338724627|ref|XP_003364981.1| PREDICTED: ras-related protein Rab-7L1-like isoform 2 [Equus
caballus]
Length = 179
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 27/32 (84%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIG 46
V++VG+ AVGK+S++QRY + +F++ YK T+G
Sbjct: 10 VLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVG 41
>gi|208609964|ref|NP_001129135.1| ras-related protein Rab-7L1 isoform 2 [Homo sapiens]
gi|194384084|dbj|BAG64815.1| unnamed protein product [Homo sapiens]
Length = 179
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 27/32 (84%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIG 46
V++VG+ AVGK+S++QRY + +F++ YK T+G
Sbjct: 10 VLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVG 41
>gi|117939061|dbj|BAF36684.1| Small G Protein RAB [Dinenympha exilis]
Length = 187
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 26/34 (76%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
V++VG+ VGK+S+IQRY F+R+YK TIGV
Sbjct: 4 VLVVGDLGVGKTSLIQRYVHNIFSREYKATIGVD 37
>gi|117939047|dbj|BAF36677.1| Small G Protein RAB [Pyrsonympha grandis]
gi|117939051|dbj|BAF36679.1| Small G Protein RAB [Dinenympha exilis]
gi|117939053|dbj|BAF36680.1| Small G Protein RAB [Dinenympha exilis]
gi|117939055|dbj|BAF36681.1| Small G Protein RAB [Dinenympha exilis]
Length = 187
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 26/34 (76%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
V++VG+ VGK+S+IQRY F+R+YK TIGV
Sbjct: 4 VLVVGDLGVGKTSLIQRYVHNIFSREYKATIGVD 37
>gi|449678021|ref|XP_002154473.2| PREDICTED: ras-related protein Rab-23-like [Hydra magnipapillata]
Length = 217
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 18/23 (78%), Positives = 22/23 (95%)
Query: 25 KSSMIQRYCRGTFTRDYKKTIGV 47
KSSMIQRYC+G F+++YKKTIGV
Sbjct: 22 KSSMIQRYCKGYFSKEYKKTIGV 44
>gi|301089487|ref|XP_002895039.1| Rab28 family GTPase, putative [Phytophthora infestans T30-4]
gi|262103693|gb|EEY61745.1| Rab28 family GTPase, putative [Phytophthora infestans T30-4]
Length = 235
Score = 43.9 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 20/40 (50%), Positives = 28/40 (70%)
Query: 8 RGSIKGTVVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
RG +V++GNG+VGKSS+I R+ F R YK+TIG+
Sbjct: 4 RGDPAIKLVLLGNGSVGKSSLIARFVDDGFARVYKQTIGL 43
>gi|401420990|ref|XP_003874984.1| putative small G-protein [Leishmania mexicana MHOM/GT/2001/U1103]
gi|322491220|emb|CBZ26485.1| putative small G-protein [Leishmania mexicana MHOM/GT/2001/U1103]
Length = 296
Score = 43.9 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 17/34 (50%), Positives = 26/34 (76%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
V++VG+G VGK+ M++R+ RG F Y+KTIG +
Sbjct: 11 VIVVGDGNVGKTCMLRRFVRGDFVDQYRKTIGAE 44
>gi|390463346|ref|XP_003733017.1| PREDICTED: ras-related protein Rab-34 [Callithrix jacchus]
gi|390463348|ref|XP_002748284.2| PREDICTED: ras-related protein Rab-34 isoform 1 [Callithrix
jacchus]
Length = 259
Score = 43.9 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 17/37 (45%), Positives = 27/37 (72%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSM 51
V++VG+ +VGK+ +I R+C+ F ++YK TIGV M
Sbjct: 55 VIVVGDLSVGKTCLINRFCKDIFDKNYKATIGVDFEM 91
>gi|148707750|gb|EDL39697.1| RAB7, member RAS oncogene family-like 1, isoform CRA_b [Mus
musculus]
Length = 46
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 27/32 (84%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIG 46
V++VG+ AVGK+S++QRY + +F++ YK T+G
Sbjct: 10 VLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVG 41
>gi|440804650|gb|ELR25527.1| Rasrelated protein Rab-32, putative [Acanthamoeba castellanii
str. Neff]
Length = 238
Score = 43.9 bits (102), Expect = 0.014, Method: Composition-based stats.
Identities = 17/37 (45%), Positives = 27/37 (72%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSM 51
+++VGN GK+S+I+RYC F+ +YK TIGV ++
Sbjct: 35 ILVVGNMGTGKTSIIKRYCDNEFSDNYKSTIGVDFAL 71
>gi|301786130|ref|XP_002928479.1| PREDICTED: ras-related protein Rab-7L1-like isoform 2 [Ailuropoda
melanoleuca]
Length = 179
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 27/32 (84%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIG 46
V++VG+ AVGK+S++QRY + +F++ YK T+G
Sbjct: 10 VLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVG 41
>gi|395531198|ref|XP_003767669.1| PREDICTED: ras-related protein Rab-7L1 isoform 2 [Sarcophilus
harrisii]
Length = 180
Score = 43.5 bits (101), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 27/32 (84%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIG 46
V++VG+ AVGK+S++QRY + +F++ YK T+G
Sbjct: 10 VLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVG 41
>gi|117939043|dbj|BAF36675.1| Small G Protein RAB [Pyrsonympha grandis]
gi|117939045|dbj|BAF36676.1| Small G Protein RAB [Pyrsonympha grandis]
Length = 184
Score = 43.5 bits (101), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 26/34 (76%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
V++VG+ VGK+S+IQRY F+R+YK TIGV
Sbjct: 4 VLVVGDLGVGKTSLIQRYVHNIFSREYKTTIGVD 37
>gi|432959688|ref|XP_004086364.1| PREDICTED: ras-related protein Rab-7L1-like [Oryzias latipes]
Length = 204
Score = 43.5 bits (101), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 24/34 (70%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
++IVG+G VGKSS + RY G F R YK T+GV
Sbjct: 8 ILIVGDGNVGKSSFVNRYISGNFNRTYKMTVGVD 41
>gi|156403881|ref|XP_001640136.1| predicted protein [Nematostella vectensis]
gi|156227269|gb|EDO48073.1| predicted protein [Nematostella vectensis]
Length = 190
Score = 43.5 bits (101), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 26/37 (70%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSM 51
V+IVG+ VGK+S +QRY G R+YK TIGV ++
Sbjct: 8 VLIVGDATVGKTSFVQRYVHGNTRREYKPTIGVDFAL 44
>gi|402466317|gb|EJW01832.1| small GTP-binding protein domain protein [Edhazardia aedis USNM
41457]
Length = 253
Score = 43.5 bits (101), Expect = 0.015, Method: Composition-based stats.
Identities = 18/42 (42%), Positives = 31/42 (73%), Gaps = 1/42 (2%)
Query: 12 KGTVVIVGNGAVGKSSMIQRYC-RGTFTRDYKKTIGVKSSMI 52
+ +VI+G+G VGK+S ++R+ G F+R YK TIGV+++ +
Sbjct: 41 RAKIVIIGDGGVGKTSFVKRFIGDGDFSRAYKATIGVETNFL 82
>gi|325190253|emb|CCA24730.1| Rab32 family GTPase putative [Albugo laibachii Nc14]
Length = 215
Score = 43.5 bits (101), Expect = 0.015, Method: Composition-based stats.
Identities = 20/48 (41%), Positives = 30/48 (62%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSMIQRYCRGTFTR 62
V+++G+ A GKSS+I+RY G+F ++ TIGV S+ GT R
Sbjct: 17 VLVLGDAATGKSSIIRRYVYGSFVEHHQTTIGVDFSLKAATVNGTTVR 64
>gi|348689686|gb|EGZ29500.1| hypothetical protein PHYSODRAFT_323017 [Phytophthora sojae]
Length = 236
Score = 43.5 bits (101), Expect = 0.016, Method: Composition-based stats.
Identities = 20/40 (50%), Positives = 28/40 (70%)
Query: 8 RGSIKGTVVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
RG +V++GNG+VGKSS+I R+ F R YK+TIG+
Sbjct: 4 RGDPAIKLVLLGNGSVGKSSLIARFVDDGFARVYKQTIGL 43
>gi|410986337|ref|XP_003999467.1| PREDICTED: ras-related protein Rab-7L1 isoform 2 [Felis catus]
Length = 179
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 26/32 (81%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIG 46
V++VG+ AVGK+S++QRY + +F + YK T+G
Sbjct: 10 VLVVGDAAVGKTSLVQRYSQDSFNKHYKSTVG 41
>gi|19920111|gb|AAM08543.1|AC079935_15 Putative Ras-related protein Rab [Oryza sativa Japonica Group]
Length = 202
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 36/61 (59%), Gaps = 4/61 (6%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK----SSMIQRYCRGTFTRDYKKTIGA 70
VV++G+ AVGKS ++ R+ R F+ D K TIGV+ + +I R + Y+ +GA
Sbjct: 13 VVLIGDSAVGKSQILARFARNEFSIDSKATIGVEFQTRTLLIDHKYRAVTSAYYRGALGA 72
Query: 71 L 71
L
Sbjct: 73 L 73
>gi|225713956|gb|ACO12824.1| Ras-related protein Rab-23 [Lepeophtheirus salmonis]
Length = 269
Score = 43.5 bits (101), Expect = 0.017, Method: Composition-based stats.
Identities = 19/24 (79%), Positives = 21/24 (87%)
Query: 24 GKSSMIQRYCRGTFTRDYKKTIGV 47
GKSSMIQR+C+G FT YKKTIGV
Sbjct: 30 GKSSMIQRFCKGIFTNKYKKTIGV 53
>gi|145552226|ref|XP_001461789.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834332|emb|CAI44519.1| rab_B59 [Paramecium tetraurelia]
gi|124429625|emb|CAK94416.1| unnamed protein product [Paramecium tetraurelia]
Length = 200
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 24/33 (72%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
+VI+GN AVGKSS++ RYC TF Y TIGV
Sbjct: 8 IVIIGNSAVGKSSLLIRYCDDTFRDIYLSTIGV 40
>gi|156403879|ref|XP_001640135.1| predicted protein [Nematostella vectensis]
gi|156227268|gb|EDO48072.1| predicted protein [Nematostella vectensis]
Length = 165
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 26/37 (70%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSM 51
V+IVG+ VGK+S +QRY G R+YK TIGV ++
Sbjct: 8 VLIVGDATVGKTSFVQRYVHGNTRREYKPTIGVDFAL 44
>gi|145515323|ref|XP_001443561.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834462|emb|CAI44553.1| rab_A59 [Paramecium tetraurelia]
gi|124410950|emb|CAK76164.1| unnamed protein product [Paramecium tetraurelia]
Length = 200
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 24/33 (72%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
+VI+GN AVGKSS++ RYC TF Y TIGV
Sbjct: 8 IVIIGNSAVGKSSLLIRYCDDTFRDIYLSTIGV 40
>gi|340057443|emb|CCC51789.1| putative small G-protein [Trypanosoma vivax Y486]
Length = 230
Score = 43.1 bits (100), Expect = 0.019, Method: Composition-based stats.
Identities = 23/61 (37%), Positives = 36/61 (59%), Gaps = 7/61 (11%)
Query: 8 RGSIKGTVVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSMIQRYCRGTFTRDYKKT 67
+ SIK V+++G+ VGK+SM++R+ +G F +YK TIG + R F R KT
Sbjct: 6 KNSIK--VIVLGDTNVGKTSMLRRFVKGDFLDEYKSTIGAEFME-----RSIFIRQLNKT 58
Query: 68 I 68
+
Sbjct: 59 V 59
>gi|260809841|ref|XP_002599713.1| hypothetical protein BRAFLDRAFT_287780 [Branchiostoma floridae]
gi|229284994|gb|EEN55725.1| hypothetical protein BRAFLDRAFT_287780 [Branchiostoma floridae]
Length = 168
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 27/37 (72%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSM 51
++I+G+ VGK+S +QRY +F R+YK T+GV ++
Sbjct: 8 ILIIGDATVGKTSFVQRYVNDSFKREYKATVGVDFAL 44
>gi|148699986|gb|EDL31933.1| RAB36, member RAS oncogene family, isoform CRA_b [Mus musculus]
Length = 346
Score = 43.1 bits (100), Expect = 0.020, Method: Composition-based stats.
Identities = 19/33 (57%), Positives = 24/33 (72%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
VV+VG+ VGK+S+I R C+ F DYK TIGV
Sbjct: 139 VVVVGDLYVGKTSLIHRLCKNVFDHDYKATIGV 171
>gi|290995484|ref|XP_002680325.1| hypothetical protein NAEGRDRAFT_31544 [Naegleria gruberi]
gi|284093945|gb|EFC47581.1| hypothetical protein NAEGRDRAFT_31544 [Naegleria gruberi]
Length = 179
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 29/41 (70%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSMIQRY 55
V+IVG+G VGK+S+++R+ + DY++TIGV Q+Y
Sbjct: 3 VIIVGDGQVGKTSLVRRFVDSKYDPDYRQTIGVAFKEKQQY 43
>gi|3452213|gb|AAC32772.1| small G-protein [Trypanosoma brucei]
gi|38224680|gb|AAR14148.1| Rab23 [Trypanosoma brucei]
Length = 226
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 31/42 (73%), Gaps = 1/42 (2%)
Query: 8 RGSIKGT-VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
RG + G V+++G+ VGKSS+++R+ GTF+ Y KT+GV+
Sbjct: 4 RGGLNGVKVIVIGDENVGKSSLLRRFVTGTFSNQYNKTVGVE 45
>gi|348517128|ref|XP_003446087.1| PREDICTED: ras-related protein Rab-7L1-like [Oreochromis
niloticus]
Length = 207
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 26/37 (70%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSM 51
++IVG+G VGKSS + RY G F + YK T+GV S+
Sbjct: 8 ILIVGDGNVGKSSFVHRYVSGQFNKTYKMTVGVDFSV 44
>gi|327278637|ref|XP_003224067.1| PREDICTED: ras-related protein Rab-7L1-like isoform 1 [Anolis
carolinensis]
Length = 202
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 27/37 (72%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSM 51
V+I+G+ VGK+S++QRY +F + YK T+GV ++
Sbjct: 4 VLIIGDATVGKTSLVQRYANDSFNKHYKSTVGVDFAL 40
>gi|66819641|ref|XP_643480.1| Rab GTPase [Dictyostelium discoideum AX4]
gi|75017350|sp|Q8MXQ2.2|RB32C_DICDI RecName: Full=Ras-related protein Rab-32C
gi|60471632|gb|EAL69588.1| Rab GTPase [Dictyostelium discoideum AX4]
Length = 224
Score = 43.1 bits (100), Expect = 0.023, Method: Composition-based stats.
Identities = 19/38 (50%), Positives = 25/38 (65%)
Query: 10 SIKGTVVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
+I +++VG A GK+S+IQRYC F YK TIGV
Sbjct: 26 AISLKILVVGKLACGKTSIIQRYCHNNFQPKYKPTIGV 63
>gi|303271331|ref|XP_003055027.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226463001|gb|EEH60279.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 167
Score = 43.1 bits (100), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 18/23 (78%), Positives = 20/23 (86%)
Query: 26 SSMIQRYCRGTFTRDYKKTIGVK 48
+SMI+RYCRG FT DYKKTIGV
Sbjct: 17 TSMIRRYCRGVFTEDYKKTIGVD 39
>gi|307178253|gb|EFN67038.1| Ras-related protein Rab-36 [Camponotus floridanus]
Length = 256
Score = 42.7 bits (99), Expect = 0.024, Method: Composition-based stats.
Identities = 16/33 (48%), Positives = 25/33 (75%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
V+++G+ AVGK+S++ R+C F +YK TIGV
Sbjct: 51 VIVIGDVAVGKTSLVNRFCHKLFNNNYKATIGV 83
>gi|345315835|ref|XP_001514317.2| PREDICTED: hypothetical protein LOC100083753 [Ornithorhynchus
anatinus]
Length = 435
Score = 42.7 bits (99), Expect = 0.025, Method: Composition-based stats.
Identities = 18/40 (45%), Positives = 26/40 (65%)
Query: 8 RGSIKGTVVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
RG+++ V+ +GN VGKS +I+RYC F Y TIG+
Sbjct: 12 RGALRIKVISMGNAEVGKSCIIKRYCEKRFVPKYLATIGI 51
>gi|345797971|ref|XP_003434383.1| PREDICTED: ras-related protein Rab-7L1 [Canis lupus familiaris]
Length = 179
Score = 42.7 bits (99), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 26/32 (81%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIG 46
V++VG+ AVGK+S++QRY + +F + YK T+G
Sbjct: 10 VLVVGDAAVGKTSLVQRYSQDSFQQHYKSTVG 41
>gi|291238353|ref|XP_002739094.1| PREDICTED: small GTP-binding protein Rab36-like [Saccoglossus
kowalevskii]
Length = 537
Score = 42.7 bits (99), Expect = 0.026, Method: Composition-based stats.
Identities = 15/32 (46%), Positives = 24/32 (75%)
Query: 16 VIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
+++G+ +VGK+ ++ R+C F RDYK TIGV
Sbjct: 57 IVIGDVSVGKTCLVNRFCHEVFNRDYKATIGV 88
>gi|117939057|dbj|BAF36682.1| Small G Protein RAB [Dinenympha exilis]
Length = 187
Score = 42.7 bits (99), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 26/34 (76%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
V++VG+ VGK+S+IQRY F+R+YK TIGV
Sbjct: 4 VLVVGDLGVGKTSLIQRYVYNIFSREYKATIGVD 37
>gi|410902249|ref|XP_003964607.1| PREDICTED: ras-related protein Rab-34-like [Takifugu rubripes]
Length = 258
Score = 42.7 bits (99), Expect = 0.028, Method: Composition-based stats.
Identities = 16/33 (48%), Positives = 25/33 (75%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
V++VG+ AVGK+ +I R+C+ F R+Y T+GV
Sbjct: 55 VIVVGDLAVGKTCLINRFCKDVFDRNYNATLGV 87
>gi|328874039|gb|EGG22405.1| G-protein-coupled receptor family 3 protein 5 [Dictyostelium
fasciculatum]
Length = 1002
Score = 42.7 bits (99), Expect = 0.028, Method: Composition-based stats.
Identities = 17/35 (48%), Positives = 26/35 (74%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKS 49
++++G+ A GKSS++ RYC +F +YK TIGV S
Sbjct: 49 LLVIGDPACGKSSIVNRYCLNSFESNYKITIGVDS 83
>gi|326435833|gb|EGD81403.1| hypothetical protein PTSG_02125 [Salpingoeca sp. ATCC 50818]
Length = 442
Score = 42.7 bits (99), Expect = 0.028, Method: Composition-based stats.
Identities = 16/33 (48%), Positives = 25/33 (75%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
VV+VG+G+ GK+S+I RYC+ F Y +T+G+
Sbjct: 11 VVVVGDGSTGKTSIITRYCQDAFAPAYNQTVGL 43
>gi|330791055|ref|XP_003283610.1| Rab GTPase [Dictyostelium purpureum]
gi|325086470|gb|EGC39859.1| Rab GTPase [Dictyostelium purpureum]
Length = 208
Score = 42.7 bits (99), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 25/38 (65%)
Query: 10 SIKGTVVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
+I +++VG A GK+S+IQRYC F YK TIGV
Sbjct: 11 AISLKILVVGKLACGKTSIIQRYCHNHFQPKYKPTIGV 48
>gi|348578125|ref|XP_003474834.1| PREDICTED: ras-related protein Rab-7L1-like isoform 1 [Cavia
porcellus]
Length = 204
Score = 42.7 bits (99), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 27/33 (81%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
V++VG+ AVGK+S+++RY + F++ YK T+GV
Sbjct: 10 VLVVGDAAVGKTSLVRRYSQDCFSKHYKSTVGV 42
>gi|322797838|gb|EFZ19746.1| hypothetical protein SINV_06034 [Solenopsis invicta]
Length = 234
Score = 42.7 bits (99), Expect = 0.031, Method: Composition-based stats.
Identities = 16/33 (48%), Positives = 25/33 (75%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
V+++G+ AVGK+S++ R+C F +YK TIGV
Sbjct: 51 VIVIGDVAVGKTSLVNRFCHKHFDNNYKATIGV 83
>gi|443693582|gb|ELT94920.1| hypothetical protein CAPTEDRAFT_101663 [Capitella teleta]
Length = 174
Score = 42.4 bits (98), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 28/37 (75%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSM 51
++ +G+ VGK+S++QRY G +T+DYK T+GV ++
Sbjct: 7 LLTIGDPGVGKTSLVQRYVHGYYTKDYKATLGVDFAL 43
>gi|328716362|ref|XP_003245910.1| PREDICTED: ras-related protein Rab-7L1-like isoform 2
[Acyrthosiphon pisum]
Length = 260
Score = 42.4 bits (98), Expect = 0.032, Method: Composition-based stats.
Identities = 15/37 (40%), Positives = 29/37 (78%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSM 51
V+I+G+ VGK++ ++RY + +F+R+YK T+GV ++
Sbjct: 67 VIIIGDPTVGKTAFVKRYVQKSFSREYKGTVGVDFAL 103
>gi|440793980|gb|ELR15151.1| Rab11/RabAfamily small GTPase [Acanthamoeba castellanii str.
Neff]
Length = 186
Score = 42.4 bits (98), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 35/57 (61%), Gaps = 4/57 (7%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSMIQRYCRGTFTRDYKKTIGAL 71
VV+VG+ AVGKS+++ R+ R FT D K TIG +RY R + Y+ +GAL
Sbjct: 17 VVLVGDSAVGKSNLLSRFTRDEFTLDCKSTIGAGQ---ERY-RAITSTYYRGAVGAL 69
>gi|440297920|gb|ELP90561.1| rab17, putative [Entamoeba invadens IP1]
Length = 209
Score = 42.4 bits (98), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 29/41 (70%)
Query: 7 LRGSIKGTVVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
L+ +++ ++++G VGK+S I++YC G F + Y+ TIGV
Sbjct: 4 LKETLQLKIIVIGEPNVGKTSTIRKYCHGVFDQLYRPTIGV 44
>gi|195135378|ref|XP_002012111.1| GI16792 [Drosophila mojavensis]
gi|193918375|gb|EDW17242.1| GI16792 [Drosophila mojavensis]
Length = 266
Score = 42.4 bits (98), Expect = 0.034, Method: Composition-based stats.
Identities = 17/33 (51%), Positives = 24/33 (72%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
V+ VG+ AVGK++M+ R+C F +YK TIGV
Sbjct: 67 VIFVGDCAVGKTAMVNRFCYDKFQSNYKATIGV 99
>gi|166157852|ref|NP_001107338.1| uncharacterized protein LOC100135159 [Xenopus (Silurana)
tropicalis]
gi|163916398|gb|AAI57147.1| LOC100135159 protein [Xenopus (Silurana) tropicalis]
Length = 204
Score = 42.4 bits (98), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 27/37 (72%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSM 51
V++VG+ VGK+S++QRY F +DYK T+GV ++
Sbjct: 10 VLVVGDSTVGKTSLLQRYVHDVFGKDYKMTMGVDFAL 46
>gi|224076403|ref|XP_002194997.1| PREDICTED: ras-related protein Rab-34 [Taeniopygia guttata]
Length = 251
Score = 42.4 bits (98), Expect = 0.036, Method: Composition-based stats.
Identities = 15/33 (45%), Positives = 26/33 (78%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
+++VG+ +VGK+ +I R+C+ F ++YK TIGV
Sbjct: 55 IIVVGDLSVGKTCLINRFCKDIFDKNYKATIGV 87
>gi|123390419|ref|XP_001299882.1| small GTP-binding protein [Trichomonas vaginalis G3]
gi|121880822|gb|EAX86952.1| small GTP-binding protein, putative [Trichomonas vaginalis G3]
Length = 192
Score = 42.4 bits (98), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 29/41 (70%)
Query: 8 RGSIKGTVVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
+I + ++G+ VGK++++ +YC+GTF+ DY T+GV+
Sbjct: 3 ESAITVKIALIGSSMVGKTTLMVKYCKGTFSEDYIATLGVQ 43
>gi|167387445|ref|XP_001738165.1| rab17 [Entamoeba dispar SAW760]
gi|165898742|gb|EDR25526.1| rab17, putative [Entamoeba dispar SAW760]
Length = 212
Score = 42.4 bits (98), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 29/41 (70%)
Query: 10 SIKGTVVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSS 50
SI+ +++VG+ + GK+S I ++C G F +Y+ TIGV+ S
Sbjct: 6 SIRLKIIVVGDPSSGKTSSIHQFCDGIFDNNYQPTIGVEFS 46
>gi|148233848|ref|NP_001085684.1| MGC80435 protein [Xenopus laevis]
gi|49118197|gb|AAH73193.1| MGC80435 protein [Xenopus laevis]
Length = 204
Score = 42.4 bits (98), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 27/37 (72%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSM 51
V++VG+ VGK+S++QRY F +DYK T+GV ++
Sbjct: 10 VLVVGDSTVGKTSLLQRYVHDVFGKDYKMTMGVDFAL 46
>gi|74193353|dbj|BAE20645.1| unnamed protein product [Mus musculus]
Length = 267
Score = 42.4 bits (98), Expect = 0.039, Method: Composition-based stats.
Identities = 20/41 (48%), Positives = 28/41 (68%), Gaps = 1/41 (2%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSMIQRY 55
VV+VG+ VGK+S+I R C+ F +YK TIGV I+R+
Sbjct: 60 VVVVGDLYVGKTSLIHRLCKNVFDHNYKATIGVDFE-IERF 99
>gi|443243718|ref|YP_007376943.1| small GTP-binding protein domain-containing protein, Ras family
[Nonlabens dokdonensis DSW-6]
gi|442801117|gb|AGC76922.1| small GTP-binding protein domain-containing protein, Ras family
[Nonlabens dokdonensis DSW-6]
Length = 160
Score = 42.4 bits (98), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 25/33 (75%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
+VIVG+ VGK+S+I+R+ TF DYK TIGV
Sbjct: 6 IVIVGSFGVGKTSLIRRFVDDTFAEDYKVTIGV 38
>gi|390348772|ref|XP_001177439.2| PREDICTED: ras and EF-hand domain-containing protein-like
[Strongylocentrotus purpuratus]
Length = 398
Score = 42.0 bits (97), Expect = 0.041, Method: Composition-based stats.
Identities = 18/33 (54%), Positives = 23/33 (69%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
VV VG+ VGK+S+I R+C TFT + TIGV
Sbjct: 211 VVFVGDSGVGKTSIIHRFCTDTFTDSFSATIGV 243
>gi|163753493|ref|ZP_02160617.1| hypothetical protein KAOT1_15072 [Kordia algicida OT-1]
gi|161327225|gb|EDP98550.1| hypothetical protein KAOT1_15072 [Kordia algicida OT-1]
Length = 163
Score = 42.0 bits (97), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 26/33 (78%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
++++G+ VGKSS+I+++ TFT DYK TIGV
Sbjct: 7 IILLGHFGVGKSSLIRQFVENTFTNDYKVTIGV 39
>gi|261332947|emb|CBH15942.1| GTP-binding protein homolog RAB1 [Trypanosoma brucei gambiense
DAL972]
Length = 226
Score = 42.0 bits (97), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 31/42 (73%), Gaps = 1/42 (2%)
Query: 8 RGSIKGT-VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
RG + G V+++G+ VGKSS+++R+ GTF+ Y +T+GV+
Sbjct: 4 RGGLNGVKVIVIGDENVGKSSLLRRFVTGTFSNQYNRTVGVE 45
>gi|440294514|gb|ELP87531.1| rab17, putative [Entamoeba invadens IP1]
Length = 210
Score = 42.0 bits (97), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 27/40 (67%)
Query: 11 IKGTVVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSS 50
I+ V++VG A GK+SMI ++C G F Y+ TIGV+ S
Sbjct: 8 IRMKVLVVGGPASGKTSMIHQFCDGAFEEIYQPTIGVEFS 47
>gi|346464621|gb|AEO32155.1| hypothetical protein [Amblyomma maculatum]
Length = 184
Score = 42.0 bits (97), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
VV++G+ AVGKS ++ R+ R F+ D K TIGV+
Sbjct: 18 VVLIGDSAVGKSQLLARFARNEFSLDSKATIGVE 51
>gi|242013615|ref|XP_002427498.1| RAB-28, putative [Pediculus humanus corporis]
gi|212511893|gb|EEB14760.1| RAB-28, putative [Pediculus humanus corporis]
Length = 224
Score = 42.0 bits (97), Expect = 0.046, Method: Composition-based stats.
Identities = 16/33 (48%), Positives = 24/33 (72%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
V+ +G+ VGK+S+++RYC FTR Y T+GV
Sbjct: 15 VLFLGDSGVGKTSLVKRYCNNDFTRQYFPTVGV 47
>gi|167533239|ref|XP_001748299.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163773111|gb|EDQ86754.1| predicted protein [Monosiga brevicollis MX1]
Length = 228
Score = 41.6 bits (96), Expect = 0.053, Method: Composition-based stats.
Identities = 16/33 (48%), Positives = 25/33 (75%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
+V++GNG GK+S+I+RYC+ F Y +TIG+
Sbjct: 13 IVVLGNGTSGKTSVIRRYCQDGFGNAYNQTIGL 45
>gi|167523387|ref|XP_001746030.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163775301|gb|EDQ88925.1| predicted protein [Monosiga brevicollis MX1]
Length = 144
Score = 41.6 bits (96), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 31/56 (55%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSMIQRYCRGTFTRDYKKTIGA 70
V+I+G+ AVGKSS+I RY F +Y T+GV S + + G R Y K A
Sbjct: 14 VLIIGDSAVGKSSLIARYVAKKFEANYLTTLGVNSKLTGQERFGQLLRVYYKNANA 69
>gi|126303040|ref|XP_001370776.1| PREDICTED: dnaJ homolog subfamily C member 27-like [Monodelphis
domestica]
Length = 273
Score = 41.6 bits (96), Expect = 0.055, Method: Composition-based stats.
Identities = 19/48 (39%), Positives = 28/48 (58%)
Query: 10 SIKGTVVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSMIQRYCR 57
S++ V+ +GN VGKS +I+RYC F Y TIG+ + + Y R
Sbjct: 14 SLRIKVISMGNAEVGKSCIIKRYCEKRFVAKYLATIGIDYGVTKVYIR 61
>gi|117422554|gb|ABK34900.1| Rbj-like protein, partial [Blastocladiella emersonii]
Length = 253
Score = 41.6 bits (96), Expect = 0.056, Method: Composition-based stats.
Identities = 18/33 (54%), Positives = 23/33 (69%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
VV+VG+ A GKS +I+RYC FT Y TIG+
Sbjct: 70 VVVVGDPAAGKSCLIRRYCERRFTASYISTIGI 102
>gi|443723076|gb|ELU11657.1| hypothetical protein CAPTEDRAFT_179488 [Capitella teleta]
Length = 245
Score = 41.6 bits (96), Expect = 0.057, Method: Composition-based stats.
Identities = 17/31 (54%), Positives = 24/31 (77%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTI 45
+V++G G VGKSS+I R+ +GTFT YK T+
Sbjct: 10 LVVLGAGGVGKSSIIARFLKGTFTDTYKPTV 40
>gi|427722220|ref|YP_007069497.1| small GTP-binding protein [Leptolyngbya sp. PCC 7376]
gi|427353940|gb|AFY36663.1| small GTP-binding protein [Leptolyngbya sp. PCC 7376]
Length = 172
Score = 41.6 bits (96), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 30/42 (71%)
Query: 9 GSIKGTVVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSS 50
+IK + ++G+ VGK+S+I+R+ G+FT +Y T+GVK S
Sbjct: 2 ATIKKKICMLGDFGVGKTSLIRRFVEGSFTDEYLSTVGVKIS 43
>gi|408399192|gb|EKJ78316.1| hypothetical protein FPSE_01502 [Fusarium pseudograminearum
CS3096]
Length = 212
Score = 41.6 bits (96), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 26/37 (70%)
Query: 12 KGTVVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
+ TVV++G+ VGKS+++ R+ R F D K TIGV+
Sbjct: 9 EPTVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVE 45
>gi|403360525|gb|EJY79941.1| hypothetical protein OXYTRI_22779 [Oxytricha trifallax]
Length = 195
Score = 41.6 bits (96), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 25/36 (69%)
Query: 11 IKGTVVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIG 46
I+ VV++G+ VGKSS+ QRYC+ F+ + TIG
Sbjct: 25 IEAKVVLLGDSGVGKSSIAQRYCKNLFSESHDVTIG 60
>gi|167382616|ref|XP_001736187.1| hypothetical protein [Entamoeba dispar SAW760]
gi|165901348|gb|EDR27431.1| hypothetical protein, conserved [Entamoeba dispar SAW760]
Length = 203
Score = 41.6 bits (96), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 24/33 (72%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
++IVG+ VGK++++QRYC TF Y TIGV
Sbjct: 12 ILIVGDSGVGKTAILQRYCNNTFDERYVSTIGV 44
>gi|159476948|ref|XP_001696573.1| small rab-related GTPase [Chlamydomonas reinhardtii]
gi|158282798|gb|EDP08550.1| small rab-related GTPase [Chlamydomonas reinhardtii]
Length = 256
Score = 41.6 bits (96), Expect = 0.058, Method: Composition-based stats.
Identities = 16/23 (69%), Positives = 21/23 (91%)
Query: 25 KSSMIQRYCRGTFTRDYKKTIGV 47
K+SMI+R+C+G FT +YKKTIGV
Sbjct: 21 KTSMIRRFCKGIFTDEYKKTIGV 43
>gi|302828466|ref|XP_002945800.1| hypothetical protein VOLCADRAFT_115722 [Volvox carteri f.
nagariensis]
gi|300268615|gb|EFJ52795.1| hypothetical protein VOLCADRAFT_115722 [Volvox carteri f.
nagariensis]
Length = 254
Score = 41.6 bits (96), Expect = 0.058, Method: Composition-based stats.
Identities = 16/23 (69%), Positives = 21/23 (91%)
Query: 25 KSSMIQRYCRGTFTRDYKKTIGV 47
K+SMI+R+C+G FT +YKKTIGV
Sbjct: 21 KTSMIRRFCKGVFTDEYKKTIGV 43
>gi|118489694|gb|ABK96648.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 117
Score = 41.6 bits (96), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 24/34 (70%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
+VI+G+ AVGKS+++ RY R F K TIGV+
Sbjct: 15 IVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVE 48
>gi|407866593|gb|EKG08335.1| small GTP-binding protein Rab7, putative [Trypanosoma cruzi]
Length = 221
Score = 41.6 bits (96), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 4/54 (7%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSMIQRYCRGTFTRDYKKTI 68
++++GN VGKS++ RYC GTF D TIG M +YC+ T +T+
Sbjct: 9 IIVIGNVGVGKSNVSSRYCDGTFYEDIVPTIG----MDFKYCQSTTLEKKPRTV 58
>gi|307211203|gb|EFN87403.1| NADPH--cytochrome P450 reductase [Harpegnathos saltator]
Length = 939
Score = 41.6 bits (96), Expect = 0.060, Method: Composition-based stats.
Identities = 15/33 (45%), Positives = 25/33 (75%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
V+++G+ AVGK++++ R+C F +YK TIGV
Sbjct: 61 VIVIGDVAVGKTALVNRFCHKLFDNNYKATIGV 93
>gi|340377777|ref|XP_003387405.1| PREDICTED: ras-related protein Rab-36-like [Amphimedon
queenslandica]
Length = 218
Score = 41.6 bits (96), Expect = 0.060, Method: Composition-based stats.
Identities = 16/33 (48%), Positives = 25/33 (75%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
V+I+G +GK+S++ RYC+ +F +YK TIGV
Sbjct: 8 VIIIGAPGIGKTSLLLRYCQDSFESNYKSTIGV 40
>gi|442749927|gb|JAA67123.1| Putative gtp-binding protein-like ras superfamily [Ixodes
ricinus]
Length = 229
Score = 41.6 bits (96), Expect = 0.061, Method: Composition-based stats.
Identities = 19/37 (51%), Positives = 26/37 (70%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSM 51
V++VG VGK+S+I+RY G F + YK TIGV S+
Sbjct: 29 VLVVGEFGVGKTSLIRRYTEGVFNQAYKITIGVDFSL 65
>gi|42561732|ref|NP_563750.2| RAB GTPase homolog A5E [Arabidopsis thaliana]
gi|29893534|gb|AAP06819.1| putative RAS-related protein ARA-1 [Arabidopsis thaliana]
gi|332189776|gb|AEE27897.1| RAB GTPase homolog A5E [Arabidopsis thaliana]
Length = 261
Score = 41.6 bits (96), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 26/34 (76%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
+V++G+ AVGKS+++ RY R F+ + K TIGV+
Sbjct: 58 IVVIGDSAVGKSNLLSRYARNEFSANSKATIGVE 91
>gi|114085|sp|P19892.1|RAA5E_ARATH RecName: Full=Ras-related protein RABA5e; Short=AtRABA5e;
AltName: Full=Ras-related protein Ara-1; Flags:
Precursor
gi|6850310|gb|AAF29387.1|AC009999_7 Strong similarity to a RAS-related protein ARA-1 from Arabidopsis
thaliana gi|114085, and is a member of the RAS PF|00071
family. EST gb|D01026 comes from this gene [Arabidopsis
thaliana]
gi|12083322|gb|AAG48820.1|AF332457_1 putative RAS-related protein ARA-1 [Arabidopsis thaliana]
gi|538283|gb|AAC13655.1| ras-related protein [Arabidopsis thaliana]
Length = 218
Score = 41.6 bits (96), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 26/34 (76%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
+V++G+ AVGKS+++ RY R F+ + K TIGV+
Sbjct: 15 IVVIGDSAVGKSNLLSRYARNEFSANSKATIGVE 48
>gi|340373077|ref|XP_003385069.1| PREDICTED: ras-related protein Rab-32B-like isoform 2 [Amphimedon
queenslandica]
Length = 117
Score = 41.6 bits (96), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 27/37 (72%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSM 51
V++VGN VGK+S+I+RY G F+ YK TIGV ++
Sbjct: 21 VLVVGNFGVGKTSVIRRYTSGIFSPHYKLTIGVDFAL 57
>gi|17380746|gb|AAL36203.1| putative RAS-related protein ARA-1 [Arabidopsis thaliana]
Length = 218
Score = 41.6 bits (96), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 26/34 (76%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
+V++G+ AVGKS+++ RY R F+ + K TIGV+
Sbjct: 15 IVVIGDSAVGKSNLLSRYARNEFSANSKATIGVE 48
>gi|89890012|ref|ZP_01201523.1| GTP-binding protein, Ras family [Flavobacteria bacterium BBFL7]
gi|89518285|gb|EAS20941.1| GTP-binding protein, Ras family [Flavobacteria bacterium BBFL7]
Length = 159
Score = 41.6 bits (96), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 26/37 (70%)
Query: 11 IKGTVVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
I +VIVG+ VGK+S+I+R+ F+ DYK TIGV
Sbjct: 2 ISKKIVIVGHFGVGKTSLIRRFVEDVFSADYKVTIGV 38
>gi|67483236|ref|XP_656897.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|56474125|gb|EAL51508.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|56790056|dbj|BAD82824.1| small GTPase EhRabC4 [Entamoeba histolytica]
gi|449704320|gb|EMD44588.1| small GTPase EhRabC4, putative [Entamoeba histolytica KU27]
Length = 203
Score = 41.6 bits (96), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 24/33 (72%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
++IVG+ VGK++++QRYC TF Y TIGV
Sbjct: 12 ILIVGDSGVGKTAILQRYCNNTFDERYISTIGV 44
>gi|71406428|ref|XP_805752.1| small GTP-binding protein Rab7 [Trypanosoma cruzi strain CL
Brener]
gi|70869283|gb|EAN83901.1| small GTP-binding protein Rab7, putative [Trypanosoma cruzi]
Length = 221
Score = 41.6 bits (96), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 30/54 (55%), Gaps = 4/54 (7%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSMIQRYCRGTFTRDYKKTI 68
++++GN VGKS++ RYC GTF D TIG M +YC T +T+
Sbjct: 9 IIVIGNVGVGKSNVSSRYCDGTFYEDIVPTIG----MDFKYCHSTTLEKKPRTV 58
>gi|71406977|ref|XP_805986.1| small GTP-binding protein Rab7 [Trypanosoma cruzi strain CL
Brener]
gi|70869598|gb|EAN84135.1| small GTP-binding protein Rab7, putative [Trypanosoma cruzi]
Length = 221
Score = 41.6 bits (96), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 30/54 (55%), Gaps = 4/54 (7%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSMIQRYCRGTFTRDYKKTI 68
++++GN VGKS++ RYC GTF D TIG M +YC T +T+
Sbjct: 9 IIVIGNVGVGKSNVSSRYCDGTFYEDIVPTIG----MDFKYCHSTTLEKKPRTV 58
>gi|297843374|ref|XP_002889568.1| hypothetical protein ARALYDRAFT_887774 [Arabidopsis lyrata subsp.
lyrata]
gi|297335410|gb|EFH65827.1| hypothetical protein ARALYDRAFT_887774 [Arabidopsis lyrata subsp.
lyrata]
Length = 218
Score = 41.6 bits (96), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 26/34 (76%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
+V++G+ AVGKS+++ RY R F+ + K TIGV+
Sbjct: 15 IVVIGDSAVGKSNLLSRYARNEFSANSKATIGVE 48
>gi|123380236|ref|XP_001298405.1| Ras family protein [Trichomonas vaginalis G3]
gi|121878954|gb|EAX85475.1| Ras family protein [Trichomonas vaginalis G3]
Length = 207
Score = 41.6 bits (96), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 27/33 (81%)
Query: 16 VIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
++VGNG+VGK+S+++R CRG F + + TIGV+
Sbjct: 15 LLVGNGSVGKTSIVRRLCRGDFITNPETTIGVE 47
>gi|118354199|ref|XP_001010362.1| small GTP-binding protein domain containing protein [Tetrahymena
thermophila]
gi|89292129|gb|EAR90117.1| small GTP-binding protein domain containing protein [Tetrahymena
thermophila SB210]
gi|307777900|dbj|BAJ21346.1| Rab-family small GTPase Rab11F [Tetrahymena thermophila]
Length = 234
Score = 41.6 bits (96), Expect = 0.068, Method: Composition-based stats.
Identities = 17/40 (42%), Positives = 25/40 (62%)
Query: 9 GSIKGTVVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
G + ++++G VGKS M+QRY + FT DY TIG +
Sbjct: 5 GQLLFKIIMLGETGVGKSQMLQRYTKNKFTEDYVTTIGAE 44
>gi|407041210|gb|EKE40595.1| Rab family GTPase [Entamoeba nuttalli P19]
Length = 203
Score = 41.6 bits (96), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 24/33 (72%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
++IVG+ VGK++++QRYC TF Y TIGV
Sbjct: 12 ILIVGDSGVGKTAILQRYCNNTFDERYISTIGV 44
>gi|356528455|ref|XP_003532818.1| PREDICTED: ras-related protein Rab11A-like [Glycine max]
Length = 209
Score = 41.6 bits (96), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
VV++G+ AVGKS ++ R+ R F+ D K TIGV+
Sbjct: 21 VVLIGDSAVGKSQILARFARNEFSLDSKSTIGVE 54
>gi|242006282|ref|XP_002423981.1| GTP-binding nuclear protein RAN1, putative [Pediculus humanus
corporis]
gi|212507263|gb|EEB11243.1| GTP-binding nuclear protein RAN1, putative [Pediculus humanus
corporis]
Length = 229
Score = 41.6 bits (96), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 29/41 (70%), Gaps = 1/41 (2%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSMIQRY 55
V+I+G+ VGK+S++ R+CR +F +YK TIGV IQ +
Sbjct: 26 VIILGDVNVGKTSVVNRFCRQSFNFNYKATIGVDFE-IQHF 65
>gi|427783513|gb|JAA57208.1| Putative rab gtpase [Rhipicephalus pulchellus]
Length = 225
Score = 41.6 bits (96), Expect = 0.068, Method: Composition-based stats.
Identities = 18/37 (48%), Positives = 26/37 (70%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSM 51
V+++G+ VGK+S+I+RY G F YK TIGV S+
Sbjct: 28 VLVIGDFGVGKTSLIRRYTEGVFNPAYKITIGVDFSL 64
>gi|340502771|gb|EGR29423.1| Ras family protein, putative [Ichthyophthirius multifiliis]
Length = 207
Score = 41.2 bits (95), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 23/33 (69%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
++I+GN VGK+ M+ RYC FT ++ TIGV
Sbjct: 12 ILIIGNSNVGKTCMVMRYCENQFTNEFYATIGV 44
>gi|219127632|ref|XP_002184036.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217404759|gb|EEC44705.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 237
Score = 41.2 bits (95), Expect = 0.069, Method: Composition-based stats.
Identities = 17/32 (53%), Positives = 23/32 (71%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIG 46
+VI+G+ VGK+S++ RY G FT YK TIG
Sbjct: 11 IVILGDSGVGKTSLMNRYSTGKFTGQYKATIG 42
>gi|297794129|ref|XP_002864949.1| hypothetical protein ARALYDRAFT_919858 [Arabidopsis lyrata subsp.
lyrata]
gi|297310784|gb|EFH41208.1| hypothetical protein ARALYDRAFT_919858 [Arabidopsis lyrata subsp.
lyrata]
Length = 226
Score = 41.2 bits (95), Expect = 0.071, Method: Composition-based stats.
Identities = 18/34 (52%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
VV++G+ AVGKS ++ RY R F+ D K TIGV+
Sbjct: 20 VVLIGDSAVGKSQILARYARDEFSLDSKATIGVE 53
>gi|15224226|ref|NP_181842.1| Ras-related protein ARA-4 [Arabidopsis thaliana]
gi|114089|sp|P28187.1|RAA5C_ARATH RecName: Full=Ras-related protein RABA5c; Short=AtRABA5c;
AltName: Full=Ras-related protein Ara-4; AltName:
Full=Ras-related protein Rab11F; Short=AtRab11F
gi|217839|dbj|BAA00831.1| small GTP-binding protein [Arabidopsis thaliana]
gi|3763922|gb|AAC64302.1| Ras-related GTP-binding protein (ARA-4) [Arabidopsis thaliana]
gi|107738301|gb|ABF83674.1| At2g43130 [Arabidopsis thaliana]
gi|222423848|dbj|BAH19889.1| AT2G43130 [Arabidopsis thaliana]
gi|330255118|gb|AEC10212.1| Ras-related protein ARA-4 [Arabidopsis thaliana]
Length = 214
Score = 41.2 bits (95), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
+VI+G+ AVGKS+++ RY R F + K TIGV+
Sbjct: 15 IVIIGDSAVGKSNLLTRYARNEFNPNSKATIGVE 48
>gi|15238392|ref|NP_201330.1| RAB GTPase homolog A4A [Arabidopsis thaliana]
gi|75333961|sp|Q9FJN8.1|RAA4A_ARATH RecName: Full=Ras-related protein RABA4a; Short=AtRABA4a
gi|10178189|dbj|BAB11663.1| GTP-binding protein [Arabidopsis thaliana]
gi|15028289|gb|AAK76621.1| putative GTP-binding protein [Arabidopsis thaliana]
gi|19310619|gb|AAL85040.1| putative GTP-binding protein [Arabidopsis thaliana]
gi|21592616|gb|AAM64565.1| GTP-binding protein [Arabidopsis thaliana]
gi|332010648|gb|AED98031.1| RAB GTPase homolog A4A [Arabidopsis thaliana]
Length = 226
Score = 41.2 bits (95), Expect = 0.071, Method: Composition-based stats.
Identities = 18/34 (52%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
VV++G+ AVGKS ++ RY R F+ D K TIGV+
Sbjct: 20 VVLIGDSAVGKSQILARYARDEFSLDSKATIGVE 53
>gi|297828009|ref|XP_002881887.1| hypothetical protein ARALYDRAFT_903694 [Arabidopsis lyrata subsp.
lyrata]
gi|297327726|gb|EFH58146.1| hypothetical protein ARALYDRAFT_903694 [Arabidopsis lyrata subsp.
lyrata]
Length = 213
Score = 41.2 bits (95), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
+VI+G+ AVGKS+++ RY R F + K TIGV+
Sbjct: 14 IVIIGDSAVGKSNLLTRYARNEFNPNSKATIGVE 47
>gi|407392837|gb|EKF26431.1| small GTP-binding protein Rab7, putative [Trypanosoma cruzi
marinkellei]
Length = 221
Score = 41.2 bits (95), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 30/54 (55%), Gaps = 4/54 (7%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSMIQRYCRGTFTRDYKKTI 68
++++GN VGKS++ RYC GTF D TIG M +YC T +T+
Sbjct: 9 IIVIGNVGVGKSNVSSRYCDGTFYEDIVPTIG----MDFKYCHSTTLEKKPRTV 58
>gi|342184478|emb|CCC93960.1| putative small G-protein [Trypanosoma congolense IL3000]
Length = 226
Score = 41.2 bits (95), Expect = 0.074, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 26/34 (76%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
+++VG+GAVGK+++++R+ G F YK T GV+
Sbjct: 10 IILVGDGAVGKTALLRRFADGEFVEQYKSTAGVE 43
>gi|403350953|gb|EJY74956.1| hypothetical protein OXYTRI_03663 [Oxytricha trifallax]
Length = 456
Score = 41.2 bits (95), Expect = 0.076, Method: Composition-based stats.
Identities = 17/36 (47%), Positives = 25/36 (69%)
Query: 11 IKGTVVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIG 46
I+ +V++G+ VGKSS+ QR+CRG F + TIG
Sbjct: 260 IEAKIVLLGDSGVGKSSIAQRFCRGIFQDTHDVTIG 295
>gi|302783080|ref|XP_002973313.1| rab family GTPase [Selaginella moellendorffii]
gi|300159066|gb|EFJ25687.1| rab family GTPase [Selaginella moellendorffii]
Length = 221
Score = 41.2 bits (95), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 26/34 (76%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
VV++G+ AVGKS+++ RY R F ++ K TIGV+
Sbjct: 16 VVLIGDSAVGKSNLLTRYARNEFNQNSKATIGVE 49
>gi|313225285|emb|CBY06759.1| unnamed protein product [Oikopleura dioica]
Length = 228
Score = 41.2 bits (95), Expect = 0.077, Method: Composition-based stats.
Identities = 16/33 (48%), Positives = 23/33 (69%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
V+++G+ VGK+S++ RY F DYK TIGV
Sbjct: 44 VIVIGDAGVGKTSLVMRYTHDVFDLDYKATIGV 76
>gi|70990240|ref|XP_749969.1| Ras GTPase Rab11 [Aspergillus fumigatus Af293]
gi|66847601|gb|EAL87931.1| Ras GTPase Rab11, putative [Aspergillus fumigatus Af293]
gi|159130449|gb|EDP55562.1| Ras GTPase Rab11, putative [Aspergillus fumigatus A1163]
Length = 204
Score = 41.2 bits (95), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 25/35 (71%)
Query: 14 TVVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
TVV++G+ VGKS+++ R+ R F D K TIGV+
Sbjct: 5 TVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVE 39
>gi|440294326|gb|ELP87343.1| rab17, putative [Entamoeba invadens IP1]
Length = 209
Score = 41.2 bits (95), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 25/33 (75%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
++++G +VGK+S I++YC G F + Y+ TIGV
Sbjct: 12 IIVIGEPSVGKTSTIKKYCHGVFDQLYRATIGV 44
>gi|290998764|ref|XP_002681950.1| rab family small GTPase [Naegleria gruberi]
gi|284095576|gb|EFC49206.1| rab family small GTPase [Naegleria gruberi]
Length = 215
Score = 41.2 bits (95), Expect = 0.079, Method: Composition-based stats.
Identities = 17/34 (50%), Positives = 26/34 (76%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
VV++G+ VGKS++I R+ + FT+D K TIGV+
Sbjct: 9 VVVIGDSGVGKSNLITRFTQNKFTKDTKPTIGVE 42
>gi|110738857|dbj|BAF01351.1| Ras-related GTP-binding protein [Arabidopsis thaliana]
Length = 147
Score = 41.2 bits (95), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
+VI+G+ AVGKS+++ RY R F + K TIGV+
Sbjct: 24 IVIIGDSAVGKSNLLTRYARNEFNPNSKATIGVE 57
>gi|340367925|ref|XP_003382503.1| PREDICTED: ras-related protein Rab-8A-like [Amphimedon
queenslandica]
Length = 201
Score = 41.2 bits (95), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 25/42 (59%)
Query: 6 VLRGSIKGTVVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
V++ I ++IVGN VGKS + R C TFT Y TIGV
Sbjct: 2 VVQPDITFKILIVGNPHVGKSCFLTRLCTNTFTTKYASTIGV 43
>gi|328773631|gb|EGF83668.1| hypothetical protein BATDEDRAFT_85182 [Batrachochytrium
dendrobatidis JAM81]
Length = 213
Score = 41.2 bits (95), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
VV++G+ VGKS+++ R+ R F +D K TIGV+
Sbjct: 12 VVLIGDSGVGKSNLLSRFARNEFNQDSKSTIGVE 45
>gi|322788802|gb|EFZ14370.1| hypothetical protein SINV_10021 [Solenopsis invicta]
Length = 722
Score = 41.2 bits (95), Expect = 0.083, Method: Composition-based stats.
Identities = 15/33 (45%), Positives = 24/33 (72%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
+V+VG+ VGK+S++Q++C FTR Y T G+
Sbjct: 498 IVLVGDSNVGKTSIVQKFCNNDFTRQYVPTAGI 530
>gi|327278639|ref|XP_003224068.1| PREDICTED: ras-related protein Rab-7L1-like isoform 2 [Anolis
carolinensis]
Length = 178
Score = 41.2 bits (95), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 24/32 (75%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIG 46
V+I+G+ VGK+S++QRY +F + YK T+G
Sbjct: 4 VLIIGDATVGKTSLVQRYANDSFNKHYKSTVG 35
>gi|449016255|dbj|BAM79657.1| small GTP-binding protein of Rab family [Cyanidioschyzon merolae
strain 10D]
Length = 298
Score = 41.2 bits (95), Expect = 0.084, Method: Composition-based stats.
Identities = 18/40 (45%), Positives = 25/40 (62%)
Query: 8 RGSIKGTVVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
R S+ V +VG+ GK+S++ RYC G F DY T+GV
Sbjct: 108 RSSLTLKVGMVGDAGCGKTSLMVRYCEGHFDEDYIMTLGV 147
>gi|268535478|ref|XP_002632872.1| C. briggsae CBR-RAB-28 protein [Caenorhabditis briggsae]
Length = 262
Score = 41.2 bits (95), Expect = 0.084, Method: Composition-based stats.
Identities = 15/33 (45%), Positives = 26/33 (78%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
+V+VG+GA GK+S+ QR+ + TF + Y +T+G+
Sbjct: 54 IVVVGDGASGKTSICQRFAKETFDKSYHQTLGL 86
>gi|340387066|ref|XP_003392029.1| PREDICTED: ras-like GTP-binding protein YPT1-like, partial
[Amphimedon queenslandica]
Length = 104
Score = 41.2 bits (95), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 25/43 (58%)
Query: 6 VLRGSIKGTVVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
V++ I ++IVGN VGKS + R C TFT Y TIGV
Sbjct: 2 VVQPDITFKILIVGNPHVGKSCFLTRLCTNTFTTKYASTIGVD 44
>gi|356527445|ref|XP_003532321.1| PREDICTED: ras-related protein RABA5d-like [Glycine max]
gi|499068|emb|CAA54506.1| GTPase [Glycine max]
Length = 219
Score = 41.2 bits (95), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSMIQRYCRGTFTRDYKKTI 68
+VI+G+ AVGKS+++ RY R F K TIGV+ Q C +++ K I
Sbjct: 16 IVIIGDSAVGKSNLLSRYARNEFNMHSKATIGVE---FQTQCLEIDSKEVKAQI 66
>gi|116780906|gb|ABK21873.1| unknown [Picea sitchensis]
Length = 210
Score = 41.2 bits (95), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
+V++G+ AVGKS+++ RY R F + K TIGV+
Sbjct: 13 IVVIGDSAVGKSNLLSRYARNEFNPNSKATIGVE 46
>gi|281210797|gb|EFA84963.1| hypothetical protein PPL_01956 [Polysphondylium pallidum PN500]
Length = 795
Score = 41.2 bits (95), Expect = 0.086, Method: Composition-based stats.
Identities = 17/33 (51%), Positives = 23/33 (69%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
+++VG A GK+S+IQR+C F YK TIGV
Sbjct: 17 ILVVGKLACGKTSIIQRFCHDEFQSKYKPTIGV 49
>gi|229596300|ref|XP_001011511.3| Ras family protein [Tetrahymena thermophila]
gi|225565488|gb|EAR91266.3| Ras family protein [Tetrahymena thermophila SB210]
gi|307777758|dbj|BAJ21275.1| Rab-family small GTPase Rab1B [Tetrahymena thermophila]
Length = 212
Score = 41.2 bits (95), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 24/33 (72%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
+V++GN VGKS M+ RY TFT+++ TIGV
Sbjct: 19 LVLIGNSGVGKSCMLMRYAENTFTQNFYNTIGV 51
>gi|403350833|gb|EJY74890.1| hypothetical protein OXYTRI_03728 [Oxytricha trifallax]
Length = 247
Score = 41.2 bits (95), Expect = 0.088, Method: Composition-based stats.
Identities = 17/36 (47%), Positives = 25/36 (69%)
Query: 11 IKGTVVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIG 46
I+ +V++G+ VGKSS+ QR+CRG F + TIG
Sbjct: 51 IEAKIVLLGDSGVGKSSIAQRFCRGIFQDTHDVTIG 86
>gi|86133741|ref|ZP_01052323.1| Ras family protein [Polaribacter sp. MED152]
gi|85820604|gb|EAQ41751.1| Ras family protein [Polaribacter sp. MED152]
Length = 161
Score = 41.2 bits (95), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 27/40 (67%)
Query: 11 IKGTVVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSS 50
I V++VGN VGK+S+I+R+ F+ DY TIGV+ S
Sbjct: 2 IAKKVLLVGNFGVGKTSLIRRFVLNEFSEDYISTIGVRVS 41
>gi|167388366|ref|XP_001738539.1| rab17 [Entamoeba dispar SAW760]
gi|165898208|gb|EDR25141.1| rab17, putative [Entamoeba dispar SAW760]
Length = 209
Score = 41.2 bits (95), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 29/40 (72%)
Query: 8 RGSIKGTVVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
+ +++ ++++G +VGK+S I++YC G F + Y+ TIGV
Sbjct: 5 KEALQLKIIVIGEPSVGKTSTIRKYCHGVFDQLYRATIGV 44
>gi|407041312|gb|EKE40659.1| Rab family GTPase, partial [Entamoeba nuttalli P19]
Length = 208
Score = 40.8 bits (94), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 29/40 (72%)
Query: 8 RGSIKGTVVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
+ +++ ++++G +VGK+S I++YC G F + Y+ TIGV
Sbjct: 4 KEALQLKIIVIGEPSVGKTSTIRKYCHGVFDQLYRATIGV 43
>gi|67481145|ref|XP_655922.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|56473090|gb|EAL50536.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|56790126|dbj|BAD82859.1| small GTPase EhRabX11 [Entamoeba histolytica]
Length = 209
Score = 40.8 bits (94), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 29/40 (72%)
Query: 8 RGSIKGTVVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
+ +++ ++++G +VGK+S I++YC G F + Y+ TIGV
Sbjct: 5 KEALQLKIIVIGEPSVGKTSTIRKYCHGVFDQLYRATIGV 44
>gi|297741822|emb|CBI33135.3| unnamed protein product [Vitis vinifera]
Length = 195
Score = 40.8 bits (94), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
VV++G+ AVGKS ++ R+ R F+ D K TIGV+
Sbjct: 20 VVLIGDSAVGKSQILARFARNEFSLDSKATIGVE 53
>gi|326920201|ref|XP_003206363.1| PREDICTED: hypothetical protein LOC100545937 [Meleagris gallopavo]
Length = 625
Score = 40.8 bits (94), Expect = 0.092, Method: Composition-based stats.
Identities = 22/42 (52%), Positives = 24/42 (57%), Gaps = 4/42 (9%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIG----VKSSMI 52
VV VGN VGKSS I R+C F D TIG VKS M+
Sbjct: 441 VVFVGNSGVGKSSFIHRFCYDRFLADLNATIGIDYQVKSLMV 482
>gi|321475351|gb|EFX86314.1| hypothetical protein DAPPUDRAFT_187550 [Daphnia pulex]
Length = 216
Score = 40.8 bits (94), Expect = 0.092, Method: Composition-based stats.
Identities = 16/37 (43%), Positives = 26/37 (70%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSM 51
+V++G+ +GK+S++QR+ G FT Y TIGV +M
Sbjct: 20 IVVIGDCGIGKTSLVQRFKSGVFTERYTNTIGVDFAM 56
>gi|193631807|ref|XP_001951808.1| PREDICTED: ras-related protein Rab-7L1-like isoform 1
[Acyrthosiphon pisum]
Length = 201
Score = 40.8 bits (94), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 29/37 (78%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSM 51
V+I+G+ VGK++ ++RY + +F+R+YK T+GV ++
Sbjct: 8 VIIIGDPTVGKTAFVKRYVQKSFSREYKGTVGVDFAL 44
>gi|356569119|ref|XP_003552753.1| PREDICTED: ras-related protein RABA5d-like [Glycine max]
Length = 219
Score = 40.8 bits (94), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSMIQRYCRGTFTRDYKKTI 68
+VI+G+ AVGKS+++ RY R F K TIGV+ Q C +++ K I
Sbjct: 16 IVIIGDSAVGKSNLLSRYARNEFNMHSKATIGVE---FQTQCLEIDSKEVKAQI 66
>gi|403331478|gb|EJY64688.1| hypothetical protein OXYTRI_15272 [Oxytricha trifallax]
Length = 247
Score = 40.8 bits (94), Expect = 0.095, Method: Composition-based stats.
Identities = 17/36 (47%), Positives = 25/36 (69%)
Query: 11 IKGTVVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIG 46
I+ +V++G+ VGKSS+ QR+CRG F + TIG
Sbjct: 51 IEAKIVLLGDSGVGKSSIAQRFCRGIFQDTHDVTIG 86
>gi|321478953|gb|EFX89909.1| hypothetical protein DAPPUDRAFT_39774 [Daphnia pulex]
Length = 175
Score = 40.8 bits (94), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 26/37 (70%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSM 51
V+I+G+ VGK+S I+RY + F DYK TIGV ++
Sbjct: 18 VIIIGDPGVGKTSFIRRYVQNAFRGDYKATIGVDFAL 54
>gi|323455023|gb|EGB10892.1| hypothetical protein AURANDRAFT_21828 [Aureococcus
anophagefferens]
Length = 226
Score = 40.8 bits (94), Expect = 0.097, Method: Composition-based stats.
Identities = 16/33 (48%), Positives = 26/33 (78%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
V+++G+GAVGK+S+ R+ FT+ YK+TIG+
Sbjct: 14 VILLGDGAVGKTSIATRFSSDEFTQSYKQTIGL 46
>gi|328700247|ref|XP_001948288.2| PREDICTED: ras and EF-hand domain-containing protein homolog
[Acyrthosiphon pisum]
Length = 582
Score = 40.8 bits (94), Expect = 0.098, Method: Composition-based stats.
Identities = 16/33 (48%), Positives = 22/33 (66%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
+V G+ AVGK+ I R+C+GTFT T+GV
Sbjct: 391 IVFAGDAAVGKTCFIHRFCKGTFTTKLGSTLGV 423
>gi|281201316|gb|EFA75528.1| Rho GTPase [Polysphondylium pallidum PN500]
Length = 197
Score = 40.8 bits (94), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 24/31 (77%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTI 45
VV+VG+GA+GK+S++ Y G F RDY+ T+
Sbjct: 6 VVVVGDGAIGKTSLLISYASGGFPRDYQPTV 36
>gi|154422352|ref|XP_001584188.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121918434|gb|EAY23202.1| hypothetical protein TVAG_185080 [Trichomonas vaginalis G3]
Length = 215
Score = 40.8 bits (94), Expect = 0.099, Method: Composition-based stats.
Identities = 19/61 (31%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Query: 10 SIKGTVVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK-SSMIQRYCRGTFTRDYKKTI 68
+++ +V+VG+G VGK++ ++R+ G F + Y T+GV+ S ++ + RG + T
Sbjct: 5 ALQAKLVLVGDGGVGKTTFVKRHQTGEFEKKYIPTLGVQVSQLVLQTSRGQILYNIWDTA 64
Query: 69 G 69
G
Sbjct: 65 G 65
>gi|123502092|ref|XP_001328221.1| GTP-binding protein YPTM1 [Trichomonas vaginalis G3]
gi|121911161|gb|EAY15998.1| GTP-binding protein YPTM1, putative [Trichomonas vaginalis G3]
Length = 199
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 24/33 (72%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
+V++GN GKSS++ R+C TF+ +Y TIGV
Sbjct: 11 IVLIGNAGCGKSSLLFRFCDNTFSDNYLSTIGV 43
>gi|413956769|gb|AFW89418.1| hypothetical protein ZEAMMB73_198274 [Zea mays]
Length = 97
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
VV++G+ AVGKS ++ R+ R F+ D K TIGV+
Sbjct: 14 VVLIGDSAVGKSQILARFARNEFSLDSKATIGVE 47
>gi|66818593|ref|XP_642956.1| Rab GTPase [Dictyostelium discoideum AX4]
gi|74897296|sp|Q550H6.1|RB11C_DICDI RecName: Full=Ras-related protein Rab-11C
gi|60471082|gb|EAL69052.1| Rab GTPase [Dictyostelium discoideum AX4]
Length = 224
Score = 40.8 bits (94), Expect = 0.10, Method: Composition-based stats.
Identities = 17/33 (51%), Positives = 24/33 (72%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
+VI+G+ AVGKS+++ R+ R FT K TIGV
Sbjct: 13 IVIIGDSAVGKSNLLNRFTRNEFTEKTKATIGV 45
>gi|357463299|ref|XP_003601931.1| GTP-binding protein [Medicago truncatula]
gi|355490979|gb|AES72182.1| GTP-binding protein [Medicago truncatula]
gi|388518511|gb|AFK47317.1| unknown [Medicago truncatula]
Length = 222
Score = 40.8 bits (94), Expect = 0.10, Method: Composition-based stats.
Identities = 17/34 (50%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
VV++G+ AVGKS ++ R+ R F+ D K TIGV+
Sbjct: 19 VVLIGDSAVGKSQILARFARNDFSMDSKATIGVE 52
>gi|225441694|ref|XP_002282798.1| PREDICTED: ras-related protein RABA4d [Vitis vinifera]
gi|147789804|emb|CAN62934.1| hypothetical protein VITISV_008844 [Vitis vinifera]
gi|297739720|emb|CBI29902.3| unnamed protein product [Vitis vinifera]
Length = 223
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 24/34 (70%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
VV++G+ AVGKS ++ R+ R F D K TIGV+
Sbjct: 18 VVLIGDSAVGKSQLLARFARNEFNVDSKATIGVE 51
>gi|403367106|gb|EJY83362.1| GTP-binding protein ypt2 [Oxytricha trifallax]
Length = 174
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 23/33 (69%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
++IVG+ VGKSS++ RYC FT Y TIGV
Sbjct: 12 LIIVGHEKVGKSSLMLRYCDNEFTEQYLATIGV 44
>gi|440299673|gb|ELP92221.1| hypothetical protein EIN_117950 [Entamoeba invadens IP1]
Length = 200
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 29/41 (70%), Gaps = 2/41 (4%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV--KSSMIQ 53
++++G+ VGK+S++QRYC F+ DY T+GV K M++
Sbjct: 12 ILVIGDSGVGKTSIMQRYCDLDFSSDYISTVGVDFKPKMLE 52
>gi|145531481|ref|XP_001451507.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834559|emb|CAI44582.1| rab_A01 [Paramecium tetraurelia]
gi|124419162|emb|CAK84110.1| unnamed protein product [Paramecium tetraurelia]
Length = 233
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 18/33 (54%), Positives = 24/33 (72%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
+VI+GN VGKSS++ RY TF+ +Y TIGV
Sbjct: 12 LVIIGNSGVGKSSLLVRYTDDTFSENYISTIGV 44
>gi|348578127|ref|XP_003474835.1| PREDICTED: ras-related protein Rab-7L1-like isoform 2 [Cavia
porcellus]
Length = 180
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 26/32 (81%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIG 46
V++VG+ AVGK+S+++RY + F++ YK T+G
Sbjct: 10 VLVVGDAAVGKTSLVRRYSQDCFSKHYKSTVG 41
>gi|168001170|ref|XP_001753288.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
gi|162695574|gb|EDQ81917.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
Length = 216
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
VV++G+ AVGKS+++ RY R F + K TIGV+
Sbjct: 15 VVLIGDSAVGKSNLLSRYARNEFNLNSKATIGVE 48
>gi|217072250|gb|ACJ84485.1| unknown [Medicago truncatula]
gi|388507312|gb|AFK41722.1| unknown [Medicago truncatula]
Length = 220
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 24/34 (70%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
VVI+G+ AVGKS+++ RY R F K TIGV+
Sbjct: 18 VVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVE 51
>gi|168056370|ref|XP_001780193.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
gi|162668343|gb|EDQ54952.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
Length = 216
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
VV++G+ AVGKS+++ RY R F + K TIGV+
Sbjct: 15 VVLIGDSAVGKSNLLSRYARNEFNLNSKATIGVE 48
>gi|15225121|ref|NP_180726.1| RAB GTPase-like protein A5D [Arabidopsis thaliana]
gi|75337278|sp|Q9SIP0.1|RAA5D_ARATH RecName: Full=Ras-related protein RABA5d; Short=AtRABA5d
gi|4582469|gb|AAD24853.1| putative RAS superfamily GTP-binding protein [Arabidopsis
thaliana]
gi|32815939|gb|AAP88354.1| At2g31680 [Arabidopsis thaliana]
gi|110743709|dbj|BAE99691.1| putative RAS superfamily GTP-binding protein [Arabidopsis
thaliana]
gi|330253478|gb|AEC08572.1| RAB GTPase-like protein A5D [Arabidopsis thaliana]
Length = 219
Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 24/34 (70%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
+VI+G+ AVGKS+++ RY R F K TIGV+
Sbjct: 15 IVIIGDSAVGKSNLLSRYARNEFNAHSKATIGVE 48
>gi|21553627|gb|AAM62720.1| putative RAS superfamily GTP-binding protein [Arabidopsis
thaliana]
Length = 219
Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 24/34 (70%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
+VI+G+ AVGKS+++ RY R F K TIGV+
Sbjct: 15 IVIIGDSAVGKSNLLSRYARNEFNAHSKATIGVE 48
>gi|428673459|gb|EKX74372.1| Ras-related protein rab11 small GTP-binding protein, putative
[Babesia equi]
Length = 221
Score = 40.8 bits (94), Expect = 0.12, Method: Composition-based stats.
Identities = 16/34 (47%), Positives = 26/34 (76%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
+V++G+ VGKS+++ R+ +GTF D K TIGV+
Sbjct: 13 IVLIGDSNVGKSNLLDRFVKGTFKLDSKSTIGVE 46
>gi|302691566|ref|XP_003035462.1| hypothetical protein SCHCODRAFT_66290 [Schizophyllum commune
H4-8]
gi|300109158|gb|EFJ00560.1| hypothetical protein SCHCODRAFT_66290 [Schizophyllum commune
H4-8]
Length = 212
Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 26/34 (76%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
+V++G+ VGKS+++ R+ R F++D K TIGV+
Sbjct: 13 IVLIGDSGVGKSNLLSRFTRNEFSQDTKSTIGVE 46
>gi|196009402|ref|XP_002114566.1| hypothetical protein TRIADDRAFT_58528 [Trichoplax adhaerens]
gi|190582628|gb|EDV22700.1| hypothetical protein TRIADDRAFT_58528 [Trichoplax adhaerens]
Length = 223
Score = 40.8 bits (94), Expect = 0.12, Method: Composition-based stats.
Identities = 14/33 (42%), Positives = 26/33 (78%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
VV++G+G GK+S+ RY +G + R+Y++T+G+
Sbjct: 16 VVLLGDGTAGKTSIASRYAQGGYNREYRQTVGL 48
>gi|242012932|ref|XP_002427179.1| GTP-binding nuclear protein RAN1, putative [Pediculus humanus
corporis]
gi|212511462|gb|EEB14441.1| GTP-binding nuclear protein RAN1, putative [Pediculus humanus
corporis]
Length = 223
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 17/37 (45%), Positives = 27/37 (72%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSM 51
+++VG+ VGK+++I+RY G FT +YK TIG S+
Sbjct: 29 ILVVGDYGVGKTAVIRRYVEGKFTSNYKVTIGADFSI 65
>gi|410075479|ref|XP_003955322.1| hypothetical protein KAFR_0A07530 [Kazachstania africana CBS
2517]
gi|372461904|emb|CCF56187.1| hypothetical protein KAFR_0A07530 [Kazachstania africana CBS
2517]
Length = 297
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 16/30 (53%), Positives = 23/30 (76%)
Query: 16 VIVGNGAVGKSSMIQRYCRGTFTRDYKKTI 45
V++G+GAVGK+S++ Y GTF RDY T+
Sbjct: 7 VVIGDGAVGKTSLLISYTTGTFPRDYVPTV 36
>gi|195375185|ref|XP_002046382.1| GJ12534 [Drosophila virilis]
gi|194153540|gb|EDW68724.1| GJ12534 [Drosophila virilis]
Length = 311
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 16/33 (48%), Positives = 24/33 (72%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
V+ VG+ AVGK++++ R+C F +YK TIGV
Sbjct: 67 VIFVGDCAVGKTAIVNRFCYDKFQSNYKATIGV 99
>gi|407037459|gb|EKE38653.1| Rab family GTPase [Entamoeba nuttalli P19]
Length = 206
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 26/36 (72%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSS 50
+++VG+ + GK+S I ++C G F +Y+ TIGV+ S
Sbjct: 5 IIVVGDPSSGKTSSIHQFCDGIFDNNYQPTIGVEFS 40
>gi|1370154|emb|CAA98183.1| RAB11G [Lotus japonicus]
Length = 219
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 24/34 (70%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
+VI+G+ AVGKS+++ RY R F K TIGV+
Sbjct: 16 IVIIGDSAVGKSNLLSRYARNEFNMHSKATIGVE 49
>gi|357146059|ref|XP_003573862.1| PREDICTED: ras-related protein Rab11D-like [Brachypodium
distachyon]
Length = 216
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 17/34 (50%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
VV++G+ AVGKS ++ R+ R F+ D K TIGV+
Sbjct: 13 VVLIGDSAVGKSQILARFARNEFSLDSKATIGVE 46
>gi|326528455|dbj|BAJ93377.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 216
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 17/34 (50%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
VV++G+ AVGKS ++ R+ R F+ D K TIGV+
Sbjct: 13 VVLIGDSAVGKSQILARFARNEFSLDSKATIGVE 46
>gi|253761760|ref|XP_002489255.1| hypothetical protein SORBIDRAFT_0012s021070 [Sorghum bicolor]
gi|241947115|gb|EES20260.1| hypothetical protein SORBIDRAFT_0012s021070 [Sorghum bicolor]
Length = 217
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 17/34 (50%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
VV++G+ AVGKS ++ R+ R F+ D K TIGV+
Sbjct: 14 VVLIGDSAVGKSQILARFARNEFSLDSKATIGVE 47
>gi|242036665|ref|XP_002465727.1| hypothetical protein SORBIDRAFT_01g044550 [Sorghum bicolor]
gi|241919581|gb|EER92725.1| hypothetical protein SORBIDRAFT_01g044550 [Sorghum bicolor]
Length = 217
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 17/34 (50%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
VV++G+ AVGKS ++ R+ R F+ D K TIGV+
Sbjct: 14 VVLIGDSAVGKSQILARFARNEFSLDSKATIGVE 47
>gi|226532614|ref|NP_001149604.1| LOC100283230 [Zea mays]
gi|195628412|gb|ACG36036.1| ras-related protein Rab11D [Zea mays]
gi|224032313|gb|ACN35232.1| unknown [Zea mays]
gi|413934318|gb|AFW68869.1| Ras protein Rab11D [Zea mays]
Length = 217
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 17/34 (50%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
VV++G+ AVGKS ++ R+ R F+ D K TIGV+
Sbjct: 14 VVLIGDSAVGKSQILARFARNEFSLDSKATIGVE 47
>gi|226503741|ref|NP_001151560.1| ras-related protein Rab11D [Zea mays]
gi|194708702|gb|ACF88435.1| unknown [Zea mays]
gi|195647718|gb|ACG43327.1| ras-related protein Rab11D [Zea mays]
gi|414865255|tpg|DAA43812.1| TPA: Ras protein Rab11D [Zea mays]
Length = 217
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 17/34 (50%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
VV++G+ AVGKS ++ R+ R F+ D K TIGV+
Sbjct: 14 VVLIGDSAVGKSQILARFARNEFSLDSKATIGVE 47
>gi|226529763|ref|NP_001151068.1| ras-related protein Rab11D [Zea mays]
gi|226958362|ref|NP_001152898.1| uncharacterized protein LOC100272235 [Zea mays]
gi|194696242|gb|ACF82205.1| unknown [Zea mays]
gi|195644068|gb|ACG41502.1| ras-related protein Rab11D [Zea mays]
gi|413956768|gb|AFW89417.1| Ras protein Rab11D [Zea mays]
Length = 217
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 17/34 (50%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
VV++G+ AVGKS ++ R+ R F+ D K TIGV+
Sbjct: 14 VVLIGDSAVGKSQILARFARNEFSLDSKATIGVE 47
>gi|297826611|ref|XP_002881188.1| hypothetical protein ARALYDRAFT_902201 [Arabidopsis lyrata subsp.
lyrata]
gi|297327027|gb|EFH57447.1| hypothetical protein ARALYDRAFT_902201 [Arabidopsis lyrata subsp.
lyrata]
Length = 219
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 24/34 (70%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
+VI+G+ AVGKS+++ RY R F K TIGV+
Sbjct: 15 IVIIGDSAVGKSNLLSRYARNEFNAHSKATIGVE 48
>gi|156371538|ref|XP_001628820.1| predicted protein [Nematostella vectensis]
gi|156215806|gb|EDO36757.1| predicted protein [Nematostella vectensis]
Length = 241
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 17/37 (45%), Positives = 27/37 (72%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSM 51
V+++G VGK+S+I+RY G F+ +YK TIGV ++
Sbjct: 19 VLVIGEYGVGKTSIIRRYTEGYFSPNYKLTIGVDFAL 55
>gi|67470492|ref|XP_651210.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|56467916|gb|EAL45824.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|56790096|dbj|BAD82844.1| small GTPase EhRabL2 [Entamoeba histolytica]
gi|56790098|dbj|BAD82845.1| small GTPase EhRabL1 [Entamoeba histolytica]
gi|449705209|gb|EMD45305.1| small GTPase EhRabL2, putative [Entamoeba histolytica KU27]
Length = 206
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 26/36 (72%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSS 50
+++VG+ + GK+S I ++C G F +Y+ TIGV+ S
Sbjct: 5 IIVVGDPSSGKTSSIHQFCDGIFDNNYQPTIGVEFS 40
>gi|21617896|gb|AAM66946.1| GTP-binding protein GB3 [Arabidopsis thaliana]
Length = 224
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 17/34 (50%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
VV++G+ AVGKS ++ R+ R F+ D K TIGV+
Sbjct: 20 VVLIGDSAVGKSQLLARFARDEFSMDSKATIGVE 53
>gi|330792269|ref|XP_003284212.1| Rab GTPase [Dictyostelium purpureum]
gi|325085909|gb|EGC39308.1| Rab GTPase [Dictyostelium purpureum]
Length = 223
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 17/33 (51%), Positives = 24/33 (72%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
+VI+G+ AVGKS+++ R+ R FT K TIGV
Sbjct: 12 IVIIGDSAVGKSNLLNRFTRNEFTEKTKATIGV 44
>gi|125563045|gb|EAZ08425.1| hypothetical protein OsI_30691 [Oryza sativa Indica Group]
gi|125563047|gb|EAZ08427.1| hypothetical protein OsI_30693 [Oryza sativa Indica Group]
Length = 85
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 24/34 (70%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
VV++G+ AVGKS ++ R+ R F D K TIGV+
Sbjct: 21 VVLIGDSAVGKSQLLARFARNEFNLDSKATIGVE 54
>gi|380018981|ref|XP_003693397.1| PREDICTED: NADPH--cytochrome P450 reductase-like [Apis florea]
Length = 938
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 16/32 (50%), Positives = 23/32 (71%)
Query: 16 VIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
+I+G+ +VGKS +I R+C F +YK TIGV
Sbjct: 61 IIIGDVSVGKSCLINRFCHKIFDNNYKATIGV 92
>gi|328790517|ref|XP_001119949.2| PREDICTED: NADPH--cytochrome P450 reductase-like [Apis mellifera]
Length = 933
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 16/32 (50%), Positives = 23/32 (71%)
Query: 16 VIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
+I+G+ +VGKS +I R+C F +YK TIGV
Sbjct: 61 IIIGDVSVGKSCLINRFCHKIFDNNYKATIGV 92
>gi|297798036|ref|XP_002866902.1| hypothetical protein ARALYDRAFT_490786 [Arabidopsis lyrata subsp.
lyrata]
gi|297312738|gb|EFH43161.1| hypothetical protein ARALYDRAFT_490786 [Arabidopsis lyrata subsp.
lyrata]
Length = 227
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 17/34 (50%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
VV++G+ AVGKS ++ R+ R F+ D K TIGV+
Sbjct: 20 VVLIGDSAVGKSQLLARFARDEFSMDSKATIGVE 53
>gi|440291820|gb|ELP85062.1| rab17, putative [Entamoeba invadens IP1]
Length = 204
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 27/34 (79%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
V+++G AVGK+S++++ C+GTF Y+ TIGV+
Sbjct: 12 VLVIGQPAVGKTSILRQLCQGTFVEGYRGTIGVE 45
>gi|145516685|ref|XP_001444231.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834389|emb|CAI44532.1| rab_B33 [Paramecium tetraurelia]
gi|124411642|emb|CAK76834.1| unnamed protein product [Paramecium tetraurelia]
Length = 204
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 23/33 (69%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
+VIVGN AVGKSS++ R+C F Y TIGV
Sbjct: 8 IVIVGNSAVGKSSLLIRFCDDQFRDMYLSTIGV 40
>gi|224143861|ref|XP_002336088.1| predicted protein [Populus trichocarpa]
gi|222871835|gb|EEF08966.1| predicted protein [Populus trichocarpa]
Length = 78
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
VV++G+ AVGKS ++ R+ R F+ D K TIGV+
Sbjct: 20 VVLIGDSAVGKSQILARFARNEFSLDSKATIGVE 53
>gi|3024505|sp|Q40522.1|RB11D_TOBAC RecName: Full=Ras-related protein Rab11D
gi|623580|gb|AAA74114.1| putative [Nicotiana tabacum]
Length = 222
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 17/34 (50%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
VV++G+ AVGKS ++ R+ R F+ D K TIGV+
Sbjct: 18 VVLIGDSAVGKSQILARFARNEFSLDSKATIGVE 51
>gi|145495635|ref|XP_001433810.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74831504|emb|CAI39318.1| rab_B65 [Paramecium tetraurelia]
gi|124400930|emb|CAK66413.1| unnamed protein product [Paramecium tetraurelia]
Length = 219
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 25/44 (56%)
Query: 4 LWVLRGSIKGTVVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
+ LR V+++GN VGKS M+ RY FT ++ TIGV
Sbjct: 11 FYNLRSHFLFKVLLIGNSGVGKSCMLMRYSENQFTNNFYNTIGV 54
>gi|356512683|ref|XP_003525046.1| PREDICTED: ras-related protein Rab11A [Glycine max]
Length = 229
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 17/34 (50%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
VV++G+ AVGKS ++ R+ R F+ D K TIGV+
Sbjct: 23 VVLIGDSAVGKSQILARFARNEFSLDSKSTIGVE 56
>gi|242053589|ref|XP_002455940.1| hypothetical protein SORBIDRAFT_03g027660 [Sorghum bicolor]
gi|241927915|gb|EES01060.1| hypothetical protein SORBIDRAFT_03g027660 [Sorghum bicolor]
Length = 220
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 31/54 (57%), Gaps = 9/54 (16%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK---------SSMIQRYCRGT 59
+VIVG+G GK++ ++R+ G F + Y+ TIGV+ MI+ YC T
Sbjct: 16 LVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFHTNCGMIRFYCWDT 69
>gi|1184985|gb|AAA87884.1| ATGB3 [Arabidopsis thaliana]
Length = 224
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 17/34 (50%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
VV++G+ AVGKS ++ R+ R F+ D K TIGV+
Sbjct: 20 VVLIGDSAVGKSQLLARFARDEFSMDSKATIGVE 53
>gi|148229890|ref|NP_001080762.1| dnaJ homolog subfamily C member 27-A [Xenopus laevis]
gi|82176806|sp|Q7ZYF1.1|DJ27A_XENLA RecName: Full=DnaJ homolog subfamily C member 27-A; AltName:
Full=Rab and DnaJ domain-containing protein 1; AltName:
Full=Rab and DnaJ domain-containing protein A
gi|27694764|gb|AAH43812.1| RBJ protein [Xenopus laevis]
gi|42491765|tpg|DAA01327.1| TPA_exp: RBJ protein 1 [Xenopus laevis]
Length = 273
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 17/40 (42%), Positives = 26/40 (65%)
Query: 8 RGSIKGTVVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
R +++ V+ +GN VGKS +I+RYC F Y+ TIG+
Sbjct: 12 RKALRIKVISMGNAEVGKSCIIKRYCEKRFVPKYQATIGI 51
>gi|145526450|ref|XP_001449036.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834509|emb|CAI44567.1| rab_A33 [Paramecium tetraurelia]
gi|124416602|emb|CAK81639.1| unnamed protein product [Paramecium tetraurelia]
Length = 204
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 23/33 (69%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
+VIVGN AVGKSS++ R+C F Y TIGV
Sbjct: 8 IVIVGNSAVGKSSLLIRFCDDQFRDMYLSTIGV 40
>gi|123496128|ref|XP_001326897.1| small GTP-binding protein [Trichomonas vaginalis G3]
gi|121909818|gb|EAY14674.1| small GTP-binding protein, putative [Trichomonas vaginalis G3]
Length = 193
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 25/32 (78%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIG 46
+VIVG+ +VGK++++Q+YC GTF+ TIG
Sbjct: 9 IVIVGDASVGKTAIMQKYCDGTFSITQPSTIG 40
>gi|443697719|gb|ELT98053.1| hypothetical protein CAPTEDRAFT_110893 [Capitella teleta]
Length = 186
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 25/37 (67%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSM 51
V+++G VGK+S+I+RY G F YK TIGV SM
Sbjct: 23 VLVIGEFGVGKTSIIRRYTEGYFVPSYKMTIGVDFSM 59
>gi|312075015|ref|XP_003140228.1| Ras family protein [Loa loa]
gi|307764604|gb|EFO23838.1| Ras family protein [Loa loa]
Length = 239
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 16/33 (48%), Positives = 24/33 (72%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
++I+G+ GKSS++QRY FT+ YK T+GV
Sbjct: 33 ILIIGDVGTGKSSIVQRYAHNLFTQHYKATVGV 65
>gi|253743679|gb|EET00015.1| GTP-binding nuclear protein RAN/TC4 [Giardia intestinalis ATCC
50581]
Length = 226
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 28/48 (58%)
Query: 11 IKGTVVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSMIQRYCRG 58
I V++VG+GA GK++ + R+ G F + Y TIGV+ + Y G
Sbjct: 5 ISFKVILVGDGATGKTTFVTRHITGEFRKQYISTIGVEIRQLPFYVAG 52
>gi|159109792|ref|XP_001705159.1| GTP-binding nuclear protein RAN/TC4 [Giardia lamblia ATCC 50803]
gi|585780|sp|P38543.1|RAN_GIALA RecName: Full=GTP-binding nuclear protein Ran; AltName:
Full=GTPase Ran; AltName: Full=Ras-like protein TC4
gi|537612|gb|AAA21426.1| Ran [Giardia intestinalis]
gi|157433239|gb|EDO77485.1| GTP-binding nuclear protein RAN/TC4 [Giardia lamblia ATCC 50803]
gi|308160074|gb|EFO62581.1| GTP-binding nuclear protein RAN/TC4 [Giardia lamblia P15]
Length = 226
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 28/48 (58%)
Query: 11 IKGTVVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSMIQRYCRG 58
I V++VG+GA GK++ + R+ G F + Y TIGV+ + Y G
Sbjct: 5 ISFKVILVGDGATGKTTFVTRHITGEFRKQYISTIGVEIRQLPFYVAG 52
>gi|384248626|gb|EIE22109.1| ras-domain-containing protein [Coccomyxa subellipsoidea C-169]
Length = 223
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 15/33 (45%), Positives = 27/33 (81%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
V++VG+ VGK+ +I+++CR T++ +Y KT+GV
Sbjct: 10 VLVVGSRCVGKTCLIKQFCRATYSDEYTKTMGV 42
>gi|15236099|ref|NP_195709.1| RAB GTPase homolog A4B [Arabidopsis thaliana]
gi|75337421|sp|Q9SMQ6.1|RAA4B_ARATH RecName: Full=Ras-related protein RABA4b; Short=AtRABA4b;
AltName: Full=Ras-related protein GB3; Short=AtGB3;
AltName: Full=Ras-related protein Rab11G;
Short=AtRab11G
gi|4490750|emb|CAB38912.1| GTP-binding protein GB3 [Arabidopsis thaliana]
gi|7271054|emb|CAB80662.1| GTP-binding protein GB3 [Arabidopsis thaliana]
gi|18253027|gb|AAL62440.1| GTP-binding protein GB3 [Arabidopsis thaliana]
gi|22136472|gb|AAM91314.1| GTP-binding protein GB3 [Arabidopsis thaliana]
gi|332661750|gb|AEE87150.1| RAB GTPase homolog A4B [Arabidopsis thaliana]
Length = 224
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 17/34 (50%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
VV++G+ AVGKS ++ R+ R F+ D K TIGV+
Sbjct: 20 VVLIGDSAVGKSQLLARFARDEFSMDSKATIGVE 53
>gi|407846083|gb|EKG02418.1| ras-related GTP-binding protein, putative [Trypanosoma cruzi]
Length = 219
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 19/42 (45%), Positives = 26/42 (61%), Gaps = 5/42 (11%)
Query: 11 IKGT-----VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
IKGT ++ +G+ VGKS +I+RYC G F Y TIG+
Sbjct: 17 IKGTEPRIKIISIGSSGVGKSCVIKRYCEGRFVSKYIPTIGI 58
>gi|123457482|ref|XP_001316468.1| small GTP-binding protein [Trichomonas vaginalis G3]
gi|121899175|gb|EAY04245.1| small GTP-binding protein, putative [Trichomonas vaginalis G3]
Length = 190
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 29/38 (76%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSMI 52
VV++G+ +VGK+S++ + RGTF+ D K T+G ++++
Sbjct: 5 VVLIGDSSVGKTSILMKASRGTFSSDTKPTVGAANAVL 42
>gi|32997031|gb|AAP45327.1| RJL [Trypanosoma cruzi]
Length = 219
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 19/42 (45%), Positives = 26/42 (61%), Gaps = 5/42 (11%)
Query: 11 IKGT-----VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
IKGT ++ +G+ VGKS +I+RYC G F Y TIG+
Sbjct: 17 IKGTEPRIKIISIGSSGVGKSCVIKRYCEGRFVSKYIPTIGI 58
>gi|359478027|ref|XP_002264559.2| PREDICTED: ras-related protein RABA5c-like isoform 2 [Vitis
vinifera]
Length = 302
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 18/34 (52%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
VVI+G+ AVGKS+++ RY R F + K TIGV+
Sbjct: 100 VVIIGDSAVGKSNLLSRYARNEFNINSKATIGVE 133
>gi|47087155|ref|NP_998723.1| dnaJ homolog subfamily C member 27 [Gallus gallus]
gi|82173532|sp|Q6IMM1.1|DJC27_CHICK RecName: Full=DnaJ homolog subfamily C member 27; AltName:
Full=Rab and DnaJ domain-containing protein
gi|42475926|tpg|DAA01321.1| TPA_exp: RBJ protein [Gallus gallus]
Length = 273
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 18/40 (45%), Positives = 25/40 (62%)
Query: 8 RGSIKGTVVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
R S++ V+ +GN VGKS +I+RYC F Y TIG+
Sbjct: 12 RKSLRIKVISMGNAEVGKSCIIKRYCEKRFVPKYLATIGI 51
>gi|281212546|gb|EFA86706.1| Rab GTPase [Polysphondylium pallidum PN500]
Length = 223
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 17/33 (51%), Positives = 24/33 (72%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
+VI+G+ AVGKS+++ R+ R FT K TIGV
Sbjct: 13 IVIIGDSAVGKSNLLNRFTRNEFTEKTKATIGV 45
>gi|363734304|ref|XP_421040.3| PREDICTED: EF-hand calcium-binding domain-containing protein
4A-like [Gallus gallus]
Length = 555
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 19/34 (55%), Positives = 20/34 (58%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
VV VGN VGKSS I R+C F D TIG K
Sbjct: 522 VVFVGNSGVGKSSFIHRFCYDRFLADLNATIGKK 555
>gi|242032295|ref|XP_002463542.1| hypothetical protein SORBIDRAFT_01g001690 [Sorghum bicolor]
gi|241917396|gb|EER90540.1| hypothetical protein SORBIDRAFT_01g001690 [Sorghum bicolor]
Length = 236
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 18/34 (52%), Positives = 26/34 (76%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
VV+VG+ VGKS+++ R+ R TF+ D K TIGV+
Sbjct: 23 VVLVGDSGVGKSNLLSRFTRNTFSLDSKSTIGVE 56
>gi|71418462|ref|XP_810857.1| ras-related GTP-binding protein [Trypanosoma cruzi strain CL
Brener]
gi|70875454|gb|EAN89006.1| ras-related GTP-binding protein, putative [Trypanosoma cruzi]
Length = 219
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 19/42 (45%), Positives = 26/42 (61%), Gaps = 5/42 (11%)
Query: 11 IKGT-----VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
IKGT ++ +G+ VGKS +I+RYC G F Y TIG+
Sbjct: 17 IKGTEPRIKIISIGSSGVGKSCVIKRYCEGRFVSKYIPTIGI 58
>gi|255632197|gb|ACU16457.1| unknown [Glycine max]
Length = 229
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 17/34 (50%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
VV++G+ AVGKS ++ R+ R F+ D K TIGV+
Sbjct: 23 VVLIGDSAVGKSQILARFARNEFSLDSKSTIGVE 56
>gi|224139832|ref|XP_002323298.1| predicted protein [Populus trichocarpa]
gi|222867928|gb|EEF05059.1| predicted protein [Populus trichocarpa]
Length = 218
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 17/34 (50%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
+V++G+ AVGKS ++ R+ R FT D K TIGV+
Sbjct: 17 IVLIGDSAVGKSQLLARFARNEFTVDSKATIGVE 50
>gi|449271378|gb|EMC81794.1| DnaJ like protein subfamily C member 27 [Columba livia]
Length = 273
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 18/40 (45%), Positives = 25/40 (62%)
Query: 8 RGSIKGTVVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
R S++ V+ +GN VGKS +I+RYC F Y TIG+
Sbjct: 12 RKSLRIKVISMGNAEVGKSCIIKRYCEKRFVPKYLATIGI 51
>gi|1381676|gb|AAB97114.1| small GTP-binding protein, partial [Glycine max]
Length = 222
Score = 40.0 bits (92), Expect = 0.15, Method: Composition-based stats.
Identities = 17/34 (50%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
VV++G+ AVGKS ++ R+ R F+ D K TIGV+
Sbjct: 16 VVLIGDSAVGKSQILARFARNEFSLDSKSTIGVE 49
>gi|255572910|ref|XP_002527386.1| protein with unknown function [Ricinus communis]
gi|223533238|gb|EEF34993.1| protein with unknown function [Ricinus communis]
Length = 218
Score = 40.0 bits (92), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 24/34 (70%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
+VI+G+ AVGKS+++ RY R F K TIGV+
Sbjct: 15 IVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVE 48
>gi|167382467|ref|XP_001736117.1| rab17 [Entamoeba dispar SAW760]
gi|165901556|gb|EDR27634.1| rab17, putative [Entamoeba dispar SAW760]
Length = 214
Score = 40.0 bits (92), Expect = 0.15, Method: Composition-based stats.
Identities = 16/41 (39%), Positives = 29/41 (70%)
Query: 10 SIKGTVVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSS 50
S++ +++VG+ + GK+S I ++C G F +Y+ TIGV+ S
Sbjct: 8 SLRLKIIVVGDPSSGKTSSIHQFCDGIFEDNYQPTIGVEFS 48
>gi|390332107|ref|XP_003723420.1| PREDICTED: ras and EF-hand domain-containing protein homolog
isoform 2 [Strongylocentrotus purpuratus]
Length = 776
Score = 40.0 bits (92), Expect = 0.15, Method: Composition-based stats.
Identities = 17/37 (45%), Positives = 23/37 (62%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSM 51
+V+ G+ AVGKSS I R C+G F + T+GV M
Sbjct: 581 IVLAGDAAVGKSSFIMRLCKGIFHSNLNSTLGVDFQM 617
>gi|390332105|ref|XP_003723419.1| PREDICTED: ras and EF-hand domain-containing protein homolog
isoform 1 [Strongylocentrotus purpuratus]
Length = 790
Score = 40.0 bits (92), Expect = 0.15, Method: Composition-based stats.
Identities = 17/37 (45%), Positives = 23/37 (62%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSM 51
+V+ G+ AVGKSS I R C+G F + T+GV M
Sbjct: 595 IVLAGDAAVGKSSFIMRLCKGIFHSNLNSTLGVDFQM 631
>gi|390332103|ref|XP_785593.3| PREDICTED: ras and EF-hand domain-containing protein homolog
isoform 3 [Strongylocentrotus purpuratus]
Length = 750
Score = 40.0 bits (92), Expect = 0.15, Method: Composition-based stats.
Identities = 17/37 (45%), Positives = 23/37 (62%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSM 51
+V+ G+ AVGKSS I R C+G F + T+GV M
Sbjct: 555 IVLAGDAAVGKSSFIMRLCKGIFHSNLNSTLGVDFQM 591
>gi|356567670|ref|XP_003552040.1| PREDICTED: ras-related protein Rab11A-like [Glycine max]
Length = 223
Score = 40.0 bits (92), Expect = 0.15, Method: Composition-based stats.
Identities = 17/34 (50%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
VV++G+ AVGKS ++ R+ R F+ D K TIGV+
Sbjct: 20 VVLIGDSAVGKSQILARFARNEFSLDSKATIGVE 53
>gi|224131546|ref|XP_002321111.1| predicted protein [Populus trichocarpa]
gi|222861884|gb|EEE99426.1| predicted protein [Populus trichocarpa]
Length = 217
Score = 40.0 bits (92), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 24/34 (70%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
+VI+G+ AVGKS+++ RY R F K TIGV+
Sbjct: 15 IVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVE 48
>gi|115481766|ref|NP_001064476.1| Os10g0377400 [Oryza sativa Japonica Group]
gi|78708412|gb|ABB47387.1| Ras-related protein Rab11D, putative, expressed [Oryza sativa
Japonica Group]
gi|113639085|dbj|BAF26390.1| Os10g0377400 [Oryza sativa Japonica Group]
gi|215767227|dbj|BAG99455.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218184417|gb|EEC66844.1| hypothetical protein OsI_33317 [Oryza sativa Indica Group]
gi|222612729|gb|EEE50861.1| hypothetical protein OsJ_31310 [Oryza sativa Japonica Group]
Length = 216
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 17/34 (50%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
VV++G+ AVGKS ++ R+ R F+ D K TIGV+
Sbjct: 13 VVLIGDSAVGKSQILARFARNEFSIDSKATIGVE 46
>gi|320167316|gb|EFW44215.1| small GTPase rabE [Capsaspora owczarzaki ATCC 30864]
Length = 265
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 16/37 (43%), Positives = 26/37 (70%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSM 51
V+I+G G GK+++I+RY T+ R YK T+GV ++
Sbjct: 48 VIIIGEGTTGKTALIRRYVDNTWDRTYKSTLGVDFAL 84
>gi|226088538|dbj|BAH37015.1| NtRab11D [Nicotiana tabacum]
Length = 222
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 17/34 (50%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
VV++G+ AVGKS ++ R+ R F+ D K TIGV+
Sbjct: 18 VVLIGDSAVGKSQILARFARNEFSLDSKATIGVE 51
>gi|224096151|ref|XP_002310552.1| predicted protein [Populus trichocarpa]
gi|222853455|gb|EEE91002.1| predicted protein [Populus trichocarpa]
Length = 223
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 17/34 (50%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
VV++G+ AVGKS ++ R+ R F+ D K TIGV+
Sbjct: 20 VVLIGDSAVGKSQILARFARNEFSLDSKATIGVE 53
>gi|224065032|ref|XP_002301639.1| predicted protein [Populus trichocarpa]
gi|222843365|gb|EEE80912.1| predicted protein [Populus trichocarpa]
Length = 217
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 24/34 (70%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
+VI+G+ AVGKS+++ RY R F K TIGV+
Sbjct: 15 IVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVE 48
>gi|23821015|ref|NP_057628.1| dnaJ homolog subfamily C member 27 isoform 1 [Homo sapiens]
gi|114576466|ref|XP_001147370.1| PREDICTED: dnaJ homolog subfamily C member 27 isoform 2 [Pan
troglodytes]
gi|397513553|ref|XP_003827076.1| PREDICTED: dnaJ homolog subfamily C member 27 [Pan paniscus]
gi|74734733|sp|Q9NZQ0.1|DJC27_HUMAN RecName: Full=DnaJ homolog subfamily C member 27; AltName:
Full=Rab and DnaJ domain-containing protein
gi|7271471|gb|AAF44347.1|AF178983_1 Rab-related GTP-binding protein RabJ [Homo sapiens]
gi|21706512|gb|AAH34049.1| DnaJ (Hsp40) homolog, subfamily C, member 27 [Homo sapiens]
gi|42475930|tpg|DAA01323.1| TPA_exp: RBJ protein [Homo sapiens]
gi|119621142|gb|EAX00737.1| Ras-associated protein Rap1, isoform CRA_c [Homo sapiens]
Length = 273
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 28/48 (58%)
Query: 10 SIKGTVVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSMIQRYCR 57
S++ V+ +GN VGKS +I+RYC F Y TIG+ + + + R
Sbjct: 14 SLRIKVISMGNAEVGKSCIIKRYCEKRFVSKYLATIGIDYGVTKVHVR 61
>gi|296224360|ref|XP_002758033.1| PREDICTED: dnaJ homolog subfamily C member 27 [Callithrix
jacchus]
Length = 273
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 28/48 (58%)
Query: 10 SIKGTVVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSMIQRYCR 57
S++ V+ +GN VGKS +I+RYC F Y TIG+ + + + R
Sbjct: 14 SLRIKVISMGNAEVGKSCIIKRYCEKRFVSKYLATIGIDYGVTKVHVR 61
>gi|168040993|ref|XP_001772977.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
gi|162675710|gb|EDQ62202.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
Length = 215
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 17/34 (50%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
VV++G+ AVGKS+++ RY R F + K TIGV+
Sbjct: 15 VVLIGDSAVGKSNLLSRYARNEFNSNSKATIGVE 48
>gi|449471775|ref|XP_002198100.2| PREDICTED: ras-related protein Rab-11A [Taeniopygia guttata]
Length = 258
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 17/42 (40%), Positives = 28/42 (66%)
Query: 7 LRGSIKGTVVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
L+ S + VV++G+ VGKS+++ R+ R F + K TIGV+
Sbjct: 48 LKHSAQTAVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVE 89
>gi|357157821|ref|XP_003577924.1| PREDICTED: ras-related protein RGP1-like isoform 2 [Brachypodium
distachyon]
Length = 227
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 17/34 (50%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
VV++G+ AVGKS ++ R+ R F+ D K TIGV+
Sbjct: 21 VVLIGDSAVGKSQLLARFARNEFSLDSKATIGVE 54
>gi|323451541|gb|EGB07418.1| hypothetical protein AURANDRAFT_6384 [Aureococcus
anophagefferens]
Length = 186
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
VV++G+ VGKS+++ R+ R F+ D K TIGV+
Sbjct: 14 VVLIGDSGVGKSNLLSRFTRNEFSLDSKSTIGVE 47
>gi|307169869|gb|EFN62378.1| Ras-related protein Rab-28 [Camponotus floridanus]
Length = 238
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 14/33 (42%), Positives = 23/33 (69%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
+V+VG+ GK+S++Q++C FTR Y T G+
Sbjct: 15 IVLVGDSGAGKTSIVQKFCNNDFTRQYVPTAGI 47
>gi|123480054|ref|XP_001323182.1| small GTP-binding protein [Trichomonas vaginalis G3]
gi|121906042|gb|EAY10959.1| small GTP-binding protein, putative [Trichomonas vaginalis G3]
Length = 197
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 27/33 (81%)
Query: 16 VIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
++VG+ AVGK+S++ R CR T++ + ++T+GV+
Sbjct: 9 LLVGDQAVGKTSLVHRLCRNTYSDNSEETVGVE 41
>gi|449530588|ref|XP_004172276.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein RABA4c-like
[Cucumis sativus]
Length = 222
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 17/34 (50%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
VV++G+ AVGKS ++ R+ R F+ D K TIGV+
Sbjct: 18 VVLIGDSAVGKSQLLSRFARNEFSLDSKATIGVE 51
>gi|449463769|ref|XP_004149604.1| PREDICTED: ras-related protein RABA4c-like [Cucumis sativus]
Length = 222
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 17/34 (50%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
VV++G+ AVGKS ++ R+ R F+ D K TIGV+
Sbjct: 18 VVLIGDSAVGKSQLLSRFARNEFSLDSKATIGVE 51
>gi|3024500|sp|Q40191.1|RB11A_LOTJA RecName: Full=Ras-related protein Rab11A; Flags: Precursor
gi|1370142|emb|CAA98177.1| RAB11A [Lotus japonicus]
Length = 226
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 17/34 (50%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
VV++G+ AVGKS ++ R+ R F+ D K TIGV+
Sbjct: 20 VVLIGDSAVGKSQILARFARNEFSLDSKSTIGVE 53
>gi|332242933|ref|XP_003270635.1| PREDICTED: dnaJ homolog subfamily C member 27 isoform 1 [Nomascus
leucogenys]
Length = 273
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 28/48 (58%)
Query: 10 SIKGTVVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSMIQRYCR 57
S++ V+ +GN VGKS +I+RYC F Y TIG+ + + + R
Sbjct: 14 SLRIKVISMGNAEVGKSCIIKRYCEKRFVSKYLATIGIDYGVTKVHVR 61
>gi|291227891|ref|XP_002733914.1| PREDICTED: RAB28, member RAS oncogene family-like [Saccoglossus
kowalevskii]
Length = 223
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 16/33 (48%), Positives = 25/33 (75%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
+VI+G+GA GK+S+ RY + F R YK+T+G+
Sbjct: 15 IVIMGDGASGKTSLATRYSQEQFGRQYKQTVGL 47
>gi|383860112|ref|XP_003705535.1| PREDICTED: NADPH--cytochrome P450 reductase-like isoform 2
[Megachile rotundata]
Length = 933
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 15/32 (46%), Positives = 23/32 (71%)
Query: 16 VIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
+++G+ +VGKS +I R+C F +YK TIGV
Sbjct: 61 IVIGDVSVGKSCLINRFCHKVFDNNYKATIGV 92
>gi|383860110|ref|XP_003705534.1| PREDICTED: NADPH--cytochrome P450 reductase-like isoform 1
[Megachile rotundata]
Length = 932
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 15/32 (46%), Positives = 23/32 (71%)
Query: 16 VIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
+++G+ +VGKS +I R+C F +YK TIGV
Sbjct: 61 IVIGDVSVGKSCLINRFCHKVFDNNYKATIGV 92
>gi|168062057|ref|XP_001783000.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
gi|162665517|gb|EDQ52199.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
Length = 215
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 17/34 (50%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
VV++G+ AVGKS+++ RY R F + K TIGV+
Sbjct: 15 VVLIGDSAVGKSNLLSRYARNEFNSNSKATIGVE 48
>gi|170590099|ref|XP_001899810.1| Ras family protein [Brugia malayi]
gi|158592729|gb|EDP31326.1| Ras family protein [Brugia malayi]
Length = 230
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 24/33 (72%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
++I+G+ GKSS++QRY FT+ YK T+GV
Sbjct: 25 ILIIGDVGTGKSSIVQRYAHNLFTQHYKATVGV 57
>gi|303738|dbj|BAA02110.1| GTP-binding protein [Pisum sativum]
gi|738935|prf||2001457C GTP-binding protein
Length = 225
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 17/34 (50%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
VV++G+ AVGKS ++ R+ R F+ D K TIGV+
Sbjct: 20 VVLIGDSAVGKSQILARFSRNEFSLDSKSTIGVE 53
>gi|291225416|ref|XP_002732696.1| PREDICTED: RAS-associated protein RAB13-like [Saccoglossus
kowalevskii]
Length = 719
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 17/33 (51%), Positives = 22/33 (66%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
VV VG+ VGKSS I R+C +F ++ TIGV
Sbjct: 533 VVFVGDSGVGKSSFIYRFCNDSFKSNFSATIGV 565
>gi|449468736|ref|XP_004152077.1| PREDICTED: ras-related protein RABA5d-like [Cucumis sativus]
gi|449502254|ref|XP_004161590.1| PREDICTED: ras-related protein RABA5d-like [Cucumis sativus]
Length = 217
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 24/34 (70%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
+VI+G+ AVGKS+++ RY R F K TIGV+
Sbjct: 16 IVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVE 49
>gi|328876805|gb|EGG25168.1| Rab GTPase [Dictyostelium fasciculatum]
Length = 221
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 17/33 (51%), Positives = 24/33 (72%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
+VI+G+ AVGKS+++ R+ R FT K TIGV
Sbjct: 12 IVIIGDSAVGKSNLLNRFTRNEFTEKTKATIGV 44
>gi|383422247|gb|AFH34337.1| EF-hand calcium-binding domain-containing protein 4B isoform a
[Macaca mulatta]
Length = 731
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 15/33 (45%), Positives = 23/33 (69%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
+V VGN AVGK+S ++R+C G F+ T+G+
Sbjct: 548 IVFVGNSAVGKTSFLRRFCEGRFSPGMAATVGI 580
>gi|225468180|ref|XP_002273530.1| PREDICTED: ras-related protein Rab11A [Vitis vinifera]
gi|147811153|emb|CAN70163.1| hypothetical protein VITISV_039255 [Vitis vinifera]
Length = 226
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 17/34 (50%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
VV++G+ AVGKS ++ R+ R F+ D K TIGV+
Sbjct: 20 VVLIGDSAVGKSQILARFARNEFSLDSKATIGVE 53
>gi|378755536|gb|EHY65562.1| GTP-binding nuclear protein GSP1/Ran [Nematocida sp. 1 ERTm2]
Length = 230
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 33/50 (66%), Gaps = 1/50 (2%)
Query: 6 VLRGSIKGTVVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSMIQRY 55
+L G +K +V+VG+G GK++ ++R+ G FT+ Y T+G ++ ++ Y
Sbjct: 21 ILDGPVK-KLVLVGDGGTGKTTFVKRHLTGEFTKRYIATVGAETYVLPFY 69
>gi|148229473|ref|NP_001088891.1| dnaJ homolog subfamily C member 27-B [Xenopus laevis]
gi|82179344|sp|Q5M7D1.1|DJ27B_XENLA RecName: Full=DnaJ homolog subfamily C member 27-B; AltName:
Full=Rab and DnaJ domain-containing protein 2; AltName:
Full=Rab and DnaJ domain-containing protein B
gi|56789664|gb|AAH88700.1| Rjb-b protein [Xenopus laevis]
Length = 276
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 17/40 (42%), Positives = 25/40 (62%)
Query: 8 RGSIKGTVVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
R ++ V+ +GN VGKS +I+RYC F Y+ TIG+
Sbjct: 12 RKPLRIKVISMGNAEVGKSCIIKRYCEKRFVPKYQATIGI 51
>gi|145485195|ref|XP_001428606.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|145492774|ref|XP_001432384.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74833753|emb|CAI39346.1| ran_B14 [Paramecium tetraurelia]
gi|74833826|emb|CAI39370.1| ran_A14 [Paramecium tetraurelia]
gi|124395693|emb|CAK61208.1| unnamed protein product [Paramecium tetraurelia]
gi|124399495|emb|CAK64987.1| unnamed protein product [Paramecium tetraurelia]
Length = 220
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 17/41 (41%), Positives = 28/41 (68%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSMIQRY 55
+V+VG+GAVGK++ ++R+ G F + Y T GV+ S + Y
Sbjct: 15 LVVVGDGAVGKTTFVKRHLTGEFEKKYLATQGVEVSQVIFY 55
>gi|197097600|ref|NP_001125081.1| dnaJ homolog subfamily C member 27 [Pongo abelii]
gi|75055181|sp|Q5RDE5.1|DJC27_PONAB RecName: Full=DnaJ homolog subfamily C member 27; AltName:
Full=Rab and DnaJ domain-containing protein
gi|55726906|emb|CAH90212.1| hypothetical protein [Pongo abelii]
Length = 273
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 28/48 (58%)
Query: 10 SIKGTVVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSMIQRYCR 57
S++ V+ +GN VGKS +I+RYC F Y TIG+ + + + R
Sbjct: 14 SLRIKVISMGNAEVGKSCIIKRYCEKRFVSKYLATIGIDYGVTKVHVR 61
>gi|407034149|gb|EKE37092.1| small GTPase Rab 32, putative, partial [Entamoeba nuttalli P19]
Length = 254
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 16/41 (39%), Positives = 29/41 (70%)
Query: 10 SIKGTVVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSS 50
S++ +++VG+ + GK+S I ++C G F +Y+ TIGV+ S
Sbjct: 50 SLRLKIIVVGDPSSGKTSSIHQFCDGIFEDNYQPTIGVEFS 90
>gi|388522627|gb|AFK49375.1| unknown [Medicago truncatula]
Length = 225
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 17/34 (50%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
VV++G+ AVGKS ++ R+ R F+ D K TIGV+
Sbjct: 20 VVLIGDSAVGKSQILARFSRNEFSLDSKSTIGVE 53
>gi|242079903|ref|XP_002444720.1| hypothetical protein SORBIDRAFT_07g026600 [Sorghum bicolor]
gi|241941070|gb|EES14215.1| hypothetical protein SORBIDRAFT_07g026600 [Sorghum bicolor]
Length = 216
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 18/34 (52%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
VVI+G+ AVGKS+++ RY R F+ K TIGV+
Sbjct: 16 VVIIGDSAVGKSNLLSRYARNEFSLHSKATIGVE 49
>gi|426334914|ref|XP_004028981.1| PREDICTED: dnaJ homolog subfamily C member 27 isoform 1 [Gorilla
gorilla gorilla]
Length = 273
Score = 40.0 bits (92), Expect = 0.18, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 28/48 (58%)
Query: 10 SIKGTVVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSMIQRYCR 57
S++ V+ +GN VGKS +I+RYC F Y TIG+ + + + R
Sbjct: 14 SLRIKVISMGNAEVGKSCIIKRYCEKRFVSKYLATIGIDYGVTKVHIR 61
>gi|60460508|gb|AAX20384.1| small GTPase [Gracilariopsis lemaneiformis]
gi|65306620|gb|AAY41883.1| small GTPase Rab11 [Gracilaria lemaneiformis]
Length = 215
Score = 40.0 bits (92), Expect = 0.18, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 29/48 (60%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSMIQRYCRGTFTR 62
VV++G+ VGKS+++ R+ R F+ + K TIGV+ + C G +
Sbjct: 15 VVLIGDAGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIQCEGKIIK 62
>gi|402890241|ref|XP_003908398.1| PREDICTED: dnaJ homolog subfamily C member 27 isoform 1 [Papio
anubis]
Length = 273
Score = 40.0 bits (92), Expect = 0.18, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 28/48 (58%)
Query: 10 SIKGTVVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSMIQRYCR 57
S++ V+ +GN VGKS +I+RYC F Y TIG+ + + + R
Sbjct: 14 SLRIKVISMGNAEVGKSCIIKRYCEKRFVSKYLATIGIDYGVTKVHVR 61
>gi|224083598|ref|XP_002307071.1| predicted protein [Populus trichocarpa]
gi|118482292|gb|ABK93073.1| unknown [Populus trichocarpa]
gi|222856520|gb|EEE94067.1| predicted protein [Populus trichocarpa]
Length = 223
Score = 40.0 bits (92), Expect = 0.18, Method: Composition-based stats.
Identities = 17/34 (50%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
VV++G+ AVGKS ++ R+ R F+ D K TIGV+
Sbjct: 20 VVLIGDSAVGKSQILARFARNEFSLDSKATIGVE 53
>gi|402585290|gb|EJW79230.1| Ras family protein, partial [Wuchereria bancrofti]
Length = 225
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 24/33 (72%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
++I+G+ GKSS++QRY FT+ YK T+GV
Sbjct: 20 ILIIGDVGTGKSSIVQRYAHNLFTQHYKATVGV 52
>gi|332017230|gb|EGI58013.1| Ras-related protein Rab-28 [Acromyrmex echinatior]
Length = 239
Score = 40.0 bits (92), Expect = 0.18, Method: Composition-based stats.
Identities = 14/33 (42%), Positives = 23/33 (69%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
+V+VG+ GK+S++Q++C FTR Y T G+
Sbjct: 15 IVLVGDSGAGKTSIVQKFCNNDFTRQYIPTAGI 47
>gi|326492460|dbj|BAK02013.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326496423|dbj|BAJ94673.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 222
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 26/34 (76%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
VV++G+ VGKS+++ R+ + TF+ D K TIGV+
Sbjct: 22 VVLIGDSGVGKSNLLSRFTKNTFSLDSKSTIGVE 55
>gi|383872328|ref|NP_001244524.1| dnaJ homolog subfamily C member 27 [Macaca mulatta]
gi|355565515|gb|EHH21944.1| hypothetical protein EGK_05118 [Macaca mulatta]
gi|380787629|gb|AFE65690.1| dnaJ homolog subfamily C member 27 isoform 1 [Macaca mulatta]
gi|383413611|gb|AFH30019.1| dnaJ homolog subfamily C member 27 isoform 1 [Macaca mulatta]
gi|384940242|gb|AFI33726.1| dnaJ homolog subfamily C member 27 isoform 1 [Macaca mulatta]
gi|384940244|gb|AFI33727.1| dnaJ homolog subfamily C member 27 isoform 1 [Macaca mulatta]
Length = 273
Score = 40.0 bits (92), Expect = 0.18, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 28/48 (58%)
Query: 10 SIKGTVVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSMIQRYCR 57
S++ V+ +GN VGKS +I+RYC F Y TIG+ + + + R
Sbjct: 14 SLRIKVISMGNAEVGKSCIIKRYCEKRFVSKYLATIGIDYGVTKVHVR 61
>gi|387592281|gb|EIJ87305.1| hypothetical protein NEQG_02428 [Nematocida parisii ERTm3]
gi|387596327|gb|EIJ93949.1| GTP-binding nuclear protein Ran [Nematocida parisii ERTm1]
Length = 230
Score = 40.0 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 17/51 (33%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
Query: 5 WVLRGSIKGTVVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSMIQRY 55
++L G +K +V+VG+G GK++ ++R+ G FT+ Y T+G ++ ++ Y
Sbjct: 20 FILDGPLK-KLVLVGDGGTGKTTFVKRHLTGEFTKRYIATVGAETYVLPFY 69
>gi|237840525|ref|XP_002369560.1| GTP-binding protein, putative [Toxoplasma gondii ME49]
gi|95007266|emb|CAJ20486.1| Rab5B protein, putative [Toxoplasma gondii RH]
gi|211967224|gb|EEB02420.1| GTP-binding protein, putative [Toxoplasma gondii ME49]
gi|221503433|gb|EEE29131.1| RAB-33, putative [Toxoplasma gondii VEG]
Length = 228
Score = 40.0 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 34/50 (68%), Gaps = 2/50 (4%)
Query: 8 RGSIKGTVVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSMIQRYCR 57
R +++ +V++G+ VGKSS+ R+CRG F + ++ TIG ++ +Q+ R
Sbjct: 33 RLNLEAKIVLLGDSGVGKSSLALRFCRGRFPQYHEVTIG--AAFLQQTIR 80
>gi|12322015|gb|AAG51053.1|AC069473_15 ras-related GTP-binding protein, putative; 1694-2636 [Arabidopsis
thaliana]
Length = 220
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
VV++G+ AVGK+ ++ R+ R F+ D K TIGV+
Sbjct: 18 VVLIGDSAVGKTQLLARFARNEFSVDSKATIGVE 51
>gi|393230001|gb|EJD37613.1| P-loop containing nucleoside triphosphate hydrolase protein
[Auricularia delicata TFB-10046 SS5]
Length = 449
Score = 40.0 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 19/46 (41%), Positives = 30/46 (65%), Gaps = 4/46 (8%)
Query: 6 VLRGSIKGTVVI----VGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
VL + G+VVI VG+ +GK+S++ +Y G+F DY +T+GV
Sbjct: 118 VLTAVVAGSVVIKVGMVGDSQIGKTSLMVKYVEGSFDEDYIQTLGV 163
>gi|66820919|ref|XP_644006.1| Ras GTPase domain-containing protein [Dictyostelium discoideum AX4]
gi|60472090|gb|EAL70043.1| Ras GTPase domain-containing protein [Dictyostelium discoideum AX4]
Length = 898
Score = 40.0 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 18/38 (47%), Positives = 26/38 (68%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSMI 52
+V++G VGKSS+I+RY +G FT Y TIG+ S +
Sbjct: 82 IVLLGGYQVGKSSIIRRYLQGCFTTSYIPTIGIDLSTL 119
>gi|356495927|ref|XP_003516822.1| PREDICTED: ras-related protein RABA4d-like [Glycine max]
Length = 223
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
VV++G+ AVGK+ ++ R+ R F+ D K TIGV+
Sbjct: 18 VVLIGDSAVGKTQLLARFARNEFSLDSKATIGVE 51
>gi|291411545|ref|XP_002722062.1| PREDICTED: RAB11B, member RAS oncogene family-like [Oryctolagus
cuniculus]
Length = 234
Score = 40.0 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 17/39 (43%), Positives = 26/39 (66%)
Query: 10 SIKGTVVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
S G VV++G+ VGKS+++ R+ R F + K TIGV+
Sbjct: 52 SWHGAVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVE 90
>gi|405978593|gb|EKC42971.1| Ras-related protein Rab-28 [Crassostrea gigas]
Length = 222
Score = 40.0 bits (92), Expect = 0.20, Method: Composition-based stats.
Identities = 17/33 (51%), Positives = 25/33 (75%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
+VI+G+GA GK+S+ RY + F R+Y +TIGV
Sbjct: 15 IVIMGDGASGKTSLATRYSQEQFGRNYVQTIGV 47
>gi|270005941|gb|EFA02389.1| hypothetical protein TcasGA2_TC008069 [Tribolium castaneum]
Length = 153
Score = 40.0 bits (92), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 11/56 (19%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV-----------KSSMIQRYCRGT 59
++++G+ VGK+S+ R+C G F + TIG+ +SSM++ Y R T
Sbjct: 27 IIVIGDSNVGKTSLTYRFCEGAFLEQSEATIGLQLWDTAGQERFRSSMVKHYYRNT 82
>gi|147784781|emb|CAN66526.1| hypothetical protein VITISV_043978 [Vitis vinifera]
Length = 215
Score = 40.0 bits (92), Expect = 0.20, Method: Composition-based stats.
Identities = 18/34 (52%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
VVI+G+ AVGKS+++ RY R F + K TIGV+
Sbjct: 13 VVIIGDSAVGKSNLLSRYARNEFNINSKATIGVE 46
>gi|67078858|gb|AAY64453.1| small GTPase rab11-3 [Gracilaria lemaneiformis]
Length = 214
Score = 40.0 bits (92), Expect = 0.20, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 29/48 (60%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSMIQRYCRGTFTR 62
VV++G+ VGKS+++ R+ R F+ + K TIGV+ + C G +
Sbjct: 14 VVLIGDAGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIQCEGKIIK 61
>gi|15230422|ref|NP_187823.1| RAB GTPase-like protein A4D [Arabidopsis thaliana]
gi|297834018|ref|XP_002884891.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|75334990|sp|Q9LH50.1|RAA4D_ARATH RecName: Full=Ras-related protein RABA4d; Short=AtRABA4d
gi|12322042|gb|AAG51065.1|AC069472_5 ras-related GTP-binding protein; 5118-4176 [Arabidopsis thaliana]
gi|9294115|dbj|BAB01966.1| GTP-binding protein-like [Arabidopsis thaliana]
gi|67633628|gb|AAY78738.1| Ras-related GTP-binding family protein [Arabidopsis thaliana]
gi|297330731|gb|EFH61150.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|332641639|gb|AEE75160.1| RAB GTPase-like protein A4D [Arabidopsis thaliana]
Length = 222
Score = 39.7 bits (91), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
VV++G+ AVGK+ ++ R+ R F+ D K TIGV+
Sbjct: 18 VVLIGDSAVGKTQLLARFARNEFSVDSKATIGVE 51
>gi|356541333|ref|XP_003539132.1| PREDICTED: ras-related protein RABA4d-like [Glycine max]
Length = 223
Score = 39.7 bits (91), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
VV++G+ AVGK+ ++ R+ R F+ D K TIGV+
Sbjct: 18 VVLIGDSAVGKTQLLARFARNEFSLDSKATIGVE 51
>gi|224285593|gb|ACN40515.1| unknown [Picea sitchensis]
Length = 217
Score = 39.7 bits (91), Expect = 0.20, Method: Composition-based stats.
Identities = 17/34 (50%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
VV++G+ AVGKS+++ RY R F + K TIGV+
Sbjct: 13 VVLIGDSAVGKSNLLSRYARNEFHMNSKATIGVE 46
>gi|148908929|gb|ABR17569.1| unknown [Picea sitchensis]
Length = 217
Score = 39.7 bits (91), Expect = 0.20, Method: Composition-based stats.
Identities = 17/34 (50%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
VV++G+ AVGKS+++ RY R F + K TIGV+
Sbjct: 13 VVLIGDSAVGKSNLLSRYARNEFHMNSKATIGVE 46
>gi|299470548|emb|CBN78536.1| Rab28, Ras superfamily GTPase [Ectocarpus siliculosus]
Length = 242
Score = 39.7 bits (91), Expect = 0.20, Method: Composition-based stats.
Identities = 15/33 (45%), Positives = 27/33 (81%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
V+++G+G VGK+S+ R+ +G F++ YK+TIG+
Sbjct: 31 VILLGDGTVGKTSIATRFAQGDFSQMYKQTIGL 63
>gi|351726222|ref|NP_001237375.1| uncharacterized protein LOC100527786 [Glycine max]
gi|255633206|gb|ACU16959.1| unknown [Glycine max]
Length = 223
Score = 39.7 bits (91), Expect = 0.20, Method: Composition-based stats.
Identities = 17/34 (50%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
VV++G+ AVGKS ++ R+ R F+ D K TIGV+
Sbjct: 20 VVLIGDSAVGKSQILARFARNEFSLDSKATIGVE 53
>gi|357148531|ref|XP_003574801.1| PREDICTED: ras-related protein RABA5c-like [Brachypodium
distachyon]
Length = 217
Score = 39.7 bits (91), Expect = 0.21, Method: Composition-based stats.
Identities = 18/34 (52%), Positives = 24/34 (70%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
VVI+G+ AVGKS+++ RY R F K TIGV+
Sbjct: 16 VVIIGDSAVGKSNLLSRYARNEFNPHSKATIGVE 49
>gi|116781881|gb|ABK22282.1| unknown [Picea sitchensis]
Length = 219
Score = 39.7 bits (91), Expect = 0.21, Method: Composition-based stats.
Identities = 17/34 (50%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
VV++G+ AVGKS ++ R+ R F+ D K TIGV+
Sbjct: 13 VVLIGDSAVGKSQILSRFARDEFSLDSKATIGVE 46
>gi|388583882|gb|EIM24183.1| ras-domain-containing protein [Wallemia sebi CBS 633.66]
Length = 222
Score = 39.7 bits (91), Expect = 0.21, Method: Composition-based stats.
Identities = 17/34 (50%), Positives = 24/34 (70%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
VV++G+ VGKSS++ R+ R F D K TIGV+
Sbjct: 14 VVLIGDSGVGKSSVLSRFTRNEFNMDSKSTIGVE 47
>gi|345311553|ref|XP_001505470.2| PREDICTED: ras-related protein Rab-11B-like [Ornithorhynchus
anatinus]
Length = 165
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 27/39 (69%)
Query: 10 SIKGTVVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
SI +VV++G+ VGKS+++ R+ R F + K TIGV+
Sbjct: 6 SIALSVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVE 44
>gi|402225755|gb|EJU05816.1| ras-domain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 213
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 24/34 (70%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
VV++G+ VGKS+++ R+ R F D K TIGV+
Sbjct: 13 VVLIGDSGVGKSNLLSRFTRNEFNPDSKSTIGVE 46
>gi|428167843|gb|EKX36796.1| hypothetical protein GUITHDRAFT_175417 [Guillardia theta
CCMP2712]
Length = 217
Score = 39.7 bits (91), Expect = 0.21, Method: Composition-based stats.
Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 17/73 (23%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK---------SSMIQRYCR-------- 57
V++VG+ VGK+S+I RY G+F YK T+GV SS+I+ R
Sbjct: 20 VLVVGDPRVGKTSIINRYVHGSFDIHYKLTLGVDFALKVIHRPSSIIRLQLRDIAGQEKA 79
Query: 58 GTFTRDYKKTIGA 70
GT TR Y + A
Sbjct: 80 GTMTRVYYRDANA 92
>gi|449451415|ref|XP_004143457.1| PREDICTED: ras-related protein Rab11A-like [Cucumis sativus]
gi|449496418|ref|XP_004160129.1| PREDICTED: ras-related protein Rab11A-like [Cucumis sativus]
Length = 226
Score = 39.7 bits (91), Expect = 0.21, Method: Composition-based stats.
Identities = 17/34 (50%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
VV++G+ AVGKS ++ R+ R F+ D K TIGV+
Sbjct: 20 VVLIGDSAVGKSQILARFARNEFSLDSKATIGVE 53
>gi|302781444|ref|XP_002972496.1| RAN, ras family GTPase [Selaginella moellendorffii]
gi|302805151|ref|XP_002984327.1| RAN, ras family GTPase [Selaginella moellendorffii]
gi|300148176|gb|EFJ14837.1| RAN, ras family GTPase [Selaginella moellendorffii]
gi|300159963|gb|EFJ26582.1| RAN, ras family GTPase [Selaginella moellendorffii]
Length = 221
Score = 39.7 bits (91), Expect = 0.21, Method: Composition-based stats.
Identities = 15/40 (37%), Positives = 27/40 (67%)
Query: 9 GSIKGTVVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
G + +VIVG+G GK++ ++R+ G F + Y+ T+GV+
Sbjct: 10 GEVSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTMGVE 49
>gi|299470209|emb|CBN79513.1| Rab11D, RAB family GTPase [Ectocarpus siliculosus]
Length = 144
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
V+++GN VGKS++I R+ F+ D++ T+GV+
Sbjct: 9 VILLGNSGVGKSNLIARFHNNDFSEDFESTVGVE 42
>gi|307107707|gb|EFN55949.1| hypothetical protein CHLNCDRAFT_48772 [Chlorella variabilis]
Length = 222
Score = 39.7 bits (91), Expect = 0.21, Method: Composition-based stats.
Identities = 16/34 (47%), Positives = 24/34 (70%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
VV++G+ VGK++ + R+CRG F K TIGV+
Sbjct: 17 VVLIGDSGVGKTNCLSRFCRGEFQASSKPTIGVE 50
>gi|440293340|gb|ELP86466.1| GTP-binding protein YPT1, putative [Entamoeba invadens IP1]
Length = 204
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 25/33 (75%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
V+I+G VGKS+++++YC+G DYK T+G+
Sbjct: 13 VLIIGESGVGKSTIVRQYCKGDIELDYKSTLGM 45
>gi|198472812|ref|XP_002133116.1| GA28834 [Drosophila pseudoobscura pseudoobscura]
gi|198139172|gb|EDY70518.1| GA28834 [Drosophila pseudoobscura pseudoobscura]
Length = 218
Score = 39.7 bits (91), Expect = 0.22, Method: Composition-based stats.
Identities = 15/32 (46%), Positives = 25/32 (78%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIG 46
+V+VG+G GK+S+I+R+ +GTF Y+ T+G
Sbjct: 8 LVLVGDGQTGKTSLIRRHLKGTFDEFYRPTVG 39
>gi|195161673|ref|XP_002021687.1| GL26371 [Drosophila persimilis]
gi|194103487|gb|EDW25530.1| GL26371 [Drosophila persimilis]
Length = 218
Score = 39.7 bits (91), Expect = 0.22, Method: Composition-based stats.
Identities = 15/32 (46%), Positives = 25/32 (78%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIG 46
+V+VG+G GK+S+I+R+ +GTF Y+ T+G
Sbjct: 8 LVLVGDGQTGKTSLIRRHLKGTFDEFYRPTVG 39
>gi|623584|gb|AAA74116.1| putative, partial [Nicotiana tabacum]
Length = 209
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 24/34 (70%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
+VI+G+ AVGKS+++ RY R F K TIGV+
Sbjct: 7 IVIIGDSAVGKSNLLTRYARNEFNLHSKATIGVE 40
>gi|432876709|ref|XP_004073074.1| PREDICTED: ras-related protein Rab-28-like [Oryzias latipes]
Length = 221
Score = 39.7 bits (91), Expect = 0.22, Method: Composition-based stats.
Identities = 15/33 (45%), Positives = 26/33 (78%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
+V+VG+GA GK+S+ R+ + +F + YK+TIG+
Sbjct: 15 IVVVGDGACGKTSLATRFAQESFGKQYKQTIGL 47
>gi|62702125|gb|AAX93052.1| unknown [Homo sapiens]
Length = 229
Score = 39.7 bits (91), Expect = 0.22, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 28/48 (58%)
Query: 10 SIKGTVVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSMIQRYCR 57
S++ V+ +GN VGKS +I+RYC F Y TIG+ + + + R
Sbjct: 14 SLRIKVISMGNAEVGKSCIIKRYCEKRFVSKYLATIGIDYGVTKVHVR 61
>gi|242048154|ref|XP_002461823.1| hypothetical protein SORBIDRAFT_02g008790 [Sorghum bicolor]
gi|241925200|gb|EER98344.1| hypothetical protein SORBIDRAFT_02g008790 [Sorghum bicolor]
Length = 223
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
VV++G+ VGKS+++ R+ + TF D K TIGV+
Sbjct: 21 VVLIGDSGVGKSNLLSRFTKNTFALDSKSTIGVE 54
>gi|255544246|ref|XP_002513185.1| protein with unknown function [Ricinus communis]
gi|223547683|gb|EEF49176.1| protein with unknown function [Ricinus communis]
Length = 223
Score = 39.7 bits (91), Expect = 0.22, Method: Composition-based stats.
Identities = 16/34 (47%), Positives = 24/34 (70%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
+V++G+ AVGKS ++ R+ R F D K TIGV+
Sbjct: 18 IVLIGDSAVGKSQLLARFARNEFNLDSKATIGVE 51
>gi|443694913|gb|ELT95931.1| hypothetical protein CAPTEDRAFT_219290 [Capitella teleta]
Length = 704
Score = 39.7 bits (91), Expect = 0.23, Method: Composition-based stats.
Identities = 17/33 (51%), Positives = 21/33 (63%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
VV VG+ VGKSS I R+C +F + TIGV
Sbjct: 514 VVFVGDSGVGKSSFIHRFCNDSFKATFSATIGV 546
>gi|391330189|ref|XP_003739546.1| PREDICTED: ras-related protein Rab-32B-like [Metaseiulus
occidentalis]
Length = 201
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 27/34 (79%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
V++VG+ VGK+++++RY G F+++YK TIGV
Sbjct: 15 VLVVGDFGVGKTAIVRRYTEGEFSQNYKITIGVD 48
>gi|401396354|ref|XP_003879801.1| putative GTP-binding protein [Neospora caninum Liverpool]
gi|325114209|emb|CBZ49766.1| putative GTP-binding protein [Neospora caninum Liverpool]
Length = 229
Score = 39.7 bits (91), Expect = 0.23, Method: Composition-based stats.
Identities = 16/39 (41%), Positives = 28/39 (71%)
Query: 8 RGSIKGTVVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIG 46
R +++ +V++G+ VGKSS+ R+CRG F + ++ TIG
Sbjct: 32 RLNLEAKIVLLGDSGVGKSSLALRFCRGRFPQYHEVTIG 70
>gi|226493760|ref|NP_001152371.1| ras-related protein ARA-4 [Zea mays]
gi|194698180|gb|ACF83174.1| unknown [Zea mays]
gi|195655655|gb|ACG47295.1| ras-related protein ARA-4 [Zea mays]
gi|414869586|tpg|DAA48143.1| TPA: hypothetical protein ZEAMMB73_561529 [Zea mays]
Length = 216
Score = 39.7 bits (91), Expect = 0.23, Method: Composition-based stats.
Identities = 18/34 (52%), Positives = 24/34 (70%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
VVI+G+ AVGKS+++ RY R F K TIGV+
Sbjct: 16 VVIIGDSAVGKSNLLSRYARNEFNPHSKATIGVE 49
>gi|115477389|ref|NP_001062290.1| Os08g0525000 [Oryza sativa Japonica Group]
gi|29647488|dbj|BAC75417.1| putative GTP-binding protein(RAB11G) [Oryza sativa Japonica
Group]
gi|113624259|dbj|BAF24204.1| Os08g0525000 [Oryza sativa Japonica Group]
gi|215737031|dbj|BAG95960.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 216
Score = 39.7 bits (91), Expect = 0.23, Method: Composition-based stats.
Identities = 18/34 (52%), Positives = 24/34 (70%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
VVI+G+ AVGKS+++ RY R F K TIGV+
Sbjct: 16 VVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVE 49
>gi|50980848|gb|AAT91270.1| putative Rab GTPase [Paxillus involutus]
gi|50980850|gb|AAT91271.1| GTPase [Paxillus involutus]
gi|50980852|gb|AAT91272.1| GTPase [Paxillus involutus]
Length = 161
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 24/34 (70%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
VV++G+ VGKS+++ R+ R F D K TIGV+
Sbjct: 1 VVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVE 34
>gi|357121701|ref|XP_003562556.1| PREDICTED: ras-related protein RABA2a-like [Brachypodium
distachyon]
Length = 221
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 26/34 (76%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
+V++G+ VGKS+++ R+ + TF+ D K TIGV+
Sbjct: 21 IVLIGDSGVGKSNLLSRFTKNTFSLDSKSTIGVE 54
>gi|389640453|ref|XP_003717859.1| Ras-like protein Rab-11A [Magnaporthe oryzae 70-15]
gi|351640412|gb|EHA48275.1| Ras-like protein Rab-11A [Magnaporthe oryzae 70-15]
gi|440469695|gb|ELQ38797.1| GTP-binding protein ypt3 [Magnaporthe oryzae Y34]
gi|440479119|gb|ELQ59905.1| GTP-binding protein ypt3 [Magnaporthe oryzae P131]
Length = 211
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 24/34 (70%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
VV++G+ VGKS+++ R+ R F D K TIGV+
Sbjct: 12 VVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVE 45
>gi|302415737|ref|XP_003005700.1| GTP-binding protein ypt3 [Verticillium albo-atrum VaMs.102]
gi|261355116|gb|EEY17544.1| GTP-binding protein ypt3 [Verticillium albo-atrum VaMs.102]
gi|346973752|gb|EGY17204.1| GTP-binding protein ypt3 [Verticillium dahliae VdLs.17]
Length = 212
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 24/34 (70%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
VV++G+ VGKS+++ R+ R F D K TIGV+
Sbjct: 12 VVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVE 45
>gi|159476950|ref|XP_001696574.1| small rab-related GTPase [Chlamydomonas reinhardtii]
gi|158282799|gb|EDP08551.1| small rab-related GTPase [Chlamydomonas reinhardtii]
Length = 174
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 16/23 (69%), Positives = 21/23 (91%)
Query: 25 KSSMIQRYCRGTFTRDYKKTIGV 47
K+SMI+R+C+G FT +YKKTIGV
Sbjct: 21 KTSMIRRFCKGIFTDEYKKTIGV 43
>gi|50980824|gb|AAT91258.1| GTPase [Paxillus involutus]
Length = 211
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 24/34 (70%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
VV++G+ VGKS+++ R+ R F D K TIGV+
Sbjct: 13 VVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVE 46
>gi|357157817|ref|XP_003577923.1| PREDICTED: ras-related protein RGP1-like isoform 1 [Brachypodium
distachyon]
Length = 226
Score = 39.7 bits (91), Expect = 0.23, Method: Composition-based stats.
Identities = 17/34 (50%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
VV++G+ AVGKS ++ R+ R F+ D K TIGV+
Sbjct: 20 VVLIGDSAVGKSQLLARFARNEFSLDSKATIGVE 53
>gi|344278076|ref|XP_003410822.1| PREDICTED: EF-hand calcium-binding domain-containing protein
4B-like [Loxodonta africana]
Length = 728
Score = 39.7 bits (91), Expect = 0.23, Method: Composition-based stats.
Identities = 14/33 (42%), Positives = 24/33 (72%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
+V+VGN +VGK+S ++R+C G F+ T+G+
Sbjct: 545 IVLVGNSSVGKTSFLRRFCEGRFSPGMAATVGI 577
>gi|326493914|dbj|BAJ85419.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 219
Score = 39.7 bits (91), Expect = 0.24, Method: Composition-based stats.
Identities = 18/34 (52%), Positives = 24/34 (70%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
VVI+G+ AVGKS+++ RY R F K TIGV+
Sbjct: 18 VVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVE 51
>gi|303319221|ref|XP_003069610.1| Ras-related protein Rab-11B , putative [Coccidioides posadasii
C735 delta SOWgp]
gi|240109296|gb|EER27465.1| Ras-related protein Rab-11B , putative [Coccidioides posadasii
C735 delta SOWgp]
gi|320040974|gb|EFW22907.1| ras GTPase Rab11 [Coccidioides posadasii str. Silveira]
gi|392865267|gb|EAS31048.2| small GTP-binding protein [Coccidioides immitis RS]
Length = 210
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 24/34 (70%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
VV++G+ VGKS+++ R+ R F D K TIGV+
Sbjct: 12 VVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVE 45
>gi|348687246|gb|EGZ27060.1| hypothetical protein PHYSODRAFT_308524 [Phytophthora sojae]
Length = 226
Score = 39.7 bits (91), Expect = 0.24, Method: Composition-based stats.
Identities = 16/33 (48%), Positives = 25/33 (75%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
V+I+G+GAVGK+S+ R+ F+ YK+TIG+
Sbjct: 18 VIILGDGAVGKTSIAMRHTEDNFSTTYKQTIGL 50
>gi|301123673|ref|XP_002909563.1| ras family GTPase, putative [Phytophthora infestans T30-4]
gi|262100325|gb|EEY58377.1| ras family GTPase, putative [Phytophthora infestans T30-4]
Length = 226
Score = 39.7 bits (91), Expect = 0.24, Method: Composition-based stats.
Identities = 16/33 (48%), Positives = 25/33 (75%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
V+I+G+GAVGK+S+ R+ F+ YK+TIG+
Sbjct: 18 VIILGDGAVGKTSIAMRHTEDNFSTTYKQTIGL 50
>gi|255581740|ref|XP_002531672.1| protein with unknown function [Ricinus communis]
gi|223528703|gb|EEF30716.1| protein with unknown function [Ricinus communis]
Length = 225
Score = 39.7 bits (91), Expect = 0.24, Method: Composition-based stats.
Identities = 17/34 (50%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
VV++G+ AVGKS ++ R+ R F+ D K TIGV+
Sbjct: 20 VVLIGDSAVGKSQILARFARNEFSLDSKATIGVE 53
>gi|429848505|gb|ELA23977.1| ras GTPase [Colletotrichum gloeosporioides Nara gc5]
Length = 212
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 24/34 (70%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
VV++G+ VGKS+++ R+ R F D K TIGV+
Sbjct: 12 VVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVE 45
>gi|115456519|ref|NP_001051860.1| Os03g0843100 [Oryza sativa Japonica Group]
gi|41469625|gb|AAS07348.1| putative GTP-binding protein [Oryza sativa Japonica Group]
gi|108712033|gb|ABF99828.1| Ras-related protein Rab11C, putative, expressed [Oryza sativa
Japonica Group]
gi|113550331|dbj|BAF13774.1| Os03g0843100 [Oryza sativa Japonica Group]
gi|215737493|dbj|BAG96623.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737626|dbj|BAG96756.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215767052|dbj|BAG99280.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218194080|gb|EEC76507.1| hypothetical protein OsI_14277 [Oryza sativa Indica Group]
gi|222626146|gb|EEE60278.1| hypothetical protein OsJ_13326 [Oryza sativa Japonica Group]
Length = 223
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 26/34 (76%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
+V++G+ VGKS+++ R+ R +F+ D K TIGV+
Sbjct: 21 IVLIGDSGVGKSNLLSRFTRNSFSLDSKSTIGVE 54
>gi|322707693|gb|EFY99271.1| Ras GTPase Rab11, putative [Metarhizium anisopliae ARSEF 23]
Length = 212
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 24/34 (70%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
VV++G+ VGKS+++ R+ R F D K TIGV+
Sbjct: 12 VVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVE 45
>gi|183230959|ref|XP_648952.2| small GTPase Rab 32 [Entamoeba histolytica HM-1:IMSS]
gi|169802698|gb|EAL43562.2| small GTPase Rab 32, putative [Entamoeba histolytica HM-1:IMSS]
gi|449705109|gb|EMD45228.1| rab17, putative [Entamoeba histolytica KU27]
Length = 256
Score = 39.7 bits (91), Expect = 0.24, Method: Composition-based stats.
Identities = 16/41 (39%), Positives = 29/41 (70%)
Query: 10 SIKGTVVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSS 50
S++ +++VG+ + GK+S I ++C G F +Y+ TIGV+ S
Sbjct: 50 SLRLKIIVVGDPSSGKTSSIHQFCDGIFEDNYQPTIGVEFS 90
>gi|387015586|gb|AFJ49912.1| dnaJ homolog subfamily C member 27-like [Crotalus adamanteus]
Length = 270
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 26/41 (63%)
Query: 7 LRGSIKGTVVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
+R S++ V+ +GN VGKS +I+RYC F Y TIG+
Sbjct: 8 MRKSLRIKVISMGNAEVGKSCVIKRYCEKRFVPKYLATIGI 48
>gi|345568399|gb|EGX51293.1| hypothetical protein AOL_s00054g363 [Arthrobotrys oligospora ATCC
24927]
Length = 209
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 24/34 (70%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
VV++G+ VGKS+++ R+ R F D K TIGV+
Sbjct: 12 VVLIGDSGVGKSNLLSRFTRNEFNMDSKSTIGVE 45
>gi|281204395|gb|EFA78591.1| Ras GTPase domain-containing protein [Polysphondylium pallidum
PN500]
Length = 798
Score = 39.7 bits (91), Expect = 0.24, Method: Composition-based stats.
Identities = 19/38 (50%), Positives = 25/38 (65%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSMI 52
+VI+G VGKSS+I+RY + FT Y TIGV S +
Sbjct: 119 IVILGGHQVGKSSLIRRYLQECFTNSYIPTIGVDLSTL 156
>gi|302901691|ref|XP_003048490.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256729423|gb|EEU42777.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 212
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 24/34 (70%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
VV++G+ VGKS+++ R+ R F D K TIGV+
Sbjct: 12 VVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVE 45
>gi|320594196|gb|EFX06599.1| Ras GTPase [Grosmannia clavigera kw1407]
Length = 211
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 24/34 (70%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
VV++G+ VGKS+++ R+ R F D K TIGV+
Sbjct: 12 VVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVE 45
>gi|315048511|ref|XP_003173630.1| hypothetical protein MGYG_03805 [Arthroderma gypseum CBS 118893]
gi|311341597|gb|EFR00800.1| hypothetical protein MGYG_03805 [Arthroderma gypseum CBS 118893]
Length = 210
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 24/34 (70%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
VV++G+ VGKS+++ R+ R F D K TIGV+
Sbjct: 12 VVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVE 45
>gi|296422463|ref|XP_002840780.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295637003|emb|CAZ84971.1| unnamed protein product [Tuber melanosporum]
Length = 212
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 24/34 (70%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
VV++G+ VGKS+++ R+ R F D K TIGV+
Sbjct: 12 VVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVE 45
>gi|268567488|ref|XP_002647794.1| Hypothetical protein CBG23562 [Caenorhabditis briggsae]
Length = 153
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
VV+VG+ VGKS+++ R+ R TF + K TIGV+
Sbjct: 15 VVLVGDSGVGKSNLLSRFTRNTFDLETKSTIGVE 48
>gi|270005262|gb|EFA01710.1| hypothetical protein TcasGA2_TC007290 [Tribolium castaneum]
Length = 107
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 27/37 (72%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSM 51
++++G+ VGK+S+I+RY GTF+ YK TIG ++
Sbjct: 36 ILVIGDFGVGKTSIIRRYADGTFSSSYKITIGADFAL 72
>gi|157865102|ref|XP_001681259.1| ras family protein-like protein [Leishmania major strain Friedlin]
gi|68124554|emb|CAJ02739.1| ras family protein-like protein [Leishmania major strain Friedlin]
Length = 335
Score = 39.7 bits (91), Expect = 0.25, Method: Composition-based stats.
Identities = 15/33 (45%), Positives = 23/33 (69%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
++++G+ VGKS +I+RYC G F Y TIG+
Sbjct: 74 LLVIGDVGVGKSCLIKRYCEGRFVAKYIPTIGI 106
>gi|407917911|gb|EKG11211.1| Ras GTPase [Macrophomina phaseolina MS6]
Length = 212
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 24/34 (70%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
VV++G+ VGKS+++ R+ R F D K TIGV+
Sbjct: 12 VVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVE 45
>gi|327300815|ref|XP_003235100.1| GTP-binding protein ypt3 [Trichophyton rubrum CBS 118892]
gi|326462452|gb|EGD87905.1| GTP-binding protein ypt3 [Trichophyton rubrum CBS 118892]
gi|326468660|gb|EGD92669.1| GTP-binding protein ypt3 [Trichophyton tonsurans CBS 112818]
gi|326485125|gb|EGE09135.1| GTP-binding protein ypt3 [Trichophyton equinum CBS 127.97]
Length = 210
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 24/34 (70%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
VV++G+ VGKS+++ R+ R F D K TIGV+
Sbjct: 12 VVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVE 45
>gi|302789646|ref|XP_002976591.1| rab family GTPase [Selaginella moellendorffii]
gi|300155629|gb|EFJ22260.1| rab family GTPase [Selaginella moellendorffii]
Length = 221
Score = 39.7 bits (91), Expect = 0.25, Method: Composition-based stats.
Identities = 17/34 (50%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
VV++G+ AVGKS+++ RY R F + K TIGV+
Sbjct: 16 VVLIGDSAVGKSNLLTRYARNEFNHNSKATIGVE 49
>gi|154303550|ref|XP_001552182.1| hypothetical protein BC1G_09346 [Botryotinia fuckeliana B05.10]
gi|347840921|emb|CCD55493.1| similar to ras-related protein rab-11b [Botryotinia fuckeliana]
Length = 213
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 24/34 (70%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
VV++G+ VGKS+++ R+ R F D K TIGV+
Sbjct: 12 VVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVE 45
>gi|50980854|gb|AAT91273.1| GTPase [Paxillus involutus]
gi|50980856|gb|AAT91274.1| GTPase [Paxillus involutus]
Length = 161
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 24/34 (70%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
VV++G+ VGKS+++ R+ R F D K TIGV+
Sbjct: 1 VVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVE 34
>gi|452986440|gb|EME86196.1| hypothetical protein MYCFIDRAFT_72266 [Pseudocercospora fijiensis
CIRAD86]
Length = 211
Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 24/34 (70%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
VV++G+ VGKS+++ R+ R F D K TIGV+
Sbjct: 12 VVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVE 45
>gi|310798039|gb|EFQ32932.1| Ras family protein [Glomerella graminicola M1.001]
Length = 212
Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 24/34 (70%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
VV++G+ VGKS+++ R+ R F D K TIGV+
Sbjct: 12 VVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVE 45
>gi|224055257|ref|XP_002298447.1| predicted protein [Populus trichocarpa]
gi|222845705|gb|EEE83252.1| predicted protein [Populus trichocarpa]
Length = 225
Score = 39.7 bits (91), Expect = 0.26, Method: Composition-based stats.
Identities = 16/34 (47%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
+V++G+ AVGKS ++ R+ R F+ D K TIGV+
Sbjct: 19 IVLIGDSAVGKSQLLARFARNEFSLDSKATIGVE 52
>gi|452846261|gb|EME48194.1| hypothetical protein DOTSEDRAFT_69969 [Dothistroma septosporum
NZE10]
Length = 212
Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 24/34 (70%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
VV++G+ VGKS+++ R+ R F D K TIGV+
Sbjct: 12 VVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVE 45
>gi|156063958|ref|XP_001597901.1| hypothetical protein SS1G_02097 [Sclerotinia sclerotiorum 1980]
gi|154697431|gb|EDN97169.1| hypothetical protein SS1G_02097 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 213
Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 24/34 (70%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
VV++G+ VGKS+++ R+ R F D K TIGV+
Sbjct: 12 VVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVE 45
>gi|56790128|dbj|BAD82860.1| small GTPase EhRabX12 [Entamoeba histolytica]
Length = 233
Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 30/47 (63%)
Query: 1 MLNLWVLRGSIKGTVVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
+LN R I V+++G+ +VGK+S++ RYC TF+ Y TIGV
Sbjct: 33 ILNKLNSRDVILLKVLLIGDISVGKTSLLLRYCDSTFSTTYITTIGV 79
>gi|350421478|ref|XP_003492855.1| PREDICTED: NADPH--cytochrome P450 reductase-like isoform 2
[Bombus impatiens]
Length = 933
Score = 39.7 bits (91), Expect = 0.26, Method: Composition-based stats.
Identities = 17/41 (41%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Query: 8 RGSIK-GTVVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
R S+K +++G+ +VGKS ++ R+C F +YK TIGV
Sbjct: 52 RVSLKIAKAIVIGDVSVGKSCLVNRFCHKIFDNNYKATIGV 92
>gi|350421474|ref|XP_003492854.1| PREDICTED: NADPH--cytochrome P450 reductase-like isoform 1
[Bombus impatiens]
Length = 932
Score = 39.7 bits (91), Expect = 0.26, Method: Composition-based stats.
Identities = 17/41 (41%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Query: 8 RGSIK-GTVVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
R S+K +++G+ +VGKS ++ R+C F +YK TIGV
Sbjct: 52 RVSLKIAKAIVIGDVSVGKSCLVNRFCHKIFDNNYKATIGV 92
>gi|340726899|ref|XP_003401789.1| PREDICTED: LOW QUALITY PROTEIN: NADPH--cytochrome P450
reductase-like [Bombus terrestris]
Length = 933
Score = 39.7 bits (91), Expect = 0.26, Method: Composition-based stats.
Identities = 17/41 (41%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Query: 8 RGSIK-GTVVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
R S+K +++G+ +VGKS ++ R+C F +YK TIGV
Sbjct: 52 RVSLKIAKAIVIGDVSVGKSCLVNRFCHKIFDNNYKATIGV 92
>gi|340515772|gb|EGR46024.1| Ras-GTPase [Trichoderma reesei QM6a]
Length = 209
Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 24/34 (70%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
VV++G+ VGKS+++ R+ R F D K TIGV+
Sbjct: 9 VVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVE 42
>gi|242020304|ref|XP_002430595.1| rab9 and, putative [Pediculus humanus corporis]
gi|212515767|gb|EEB17857.1| rab9 and, putative [Pediculus humanus corporis]
Length = 210
Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 24/34 (70%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
VVI+G+GAVGKS ++QRY F + TIGV+
Sbjct: 10 VVILGDGAVGKSCLMQRYVNNRFDENSFHTIGVE 43
>gi|449464898|ref|XP_004150166.1| PREDICTED: ras-related protein RABA4d-like [Cucumis sativus]
gi|449476501|ref|XP_004154754.1| PREDICTED: ras-related protein RABA4d-like [Cucumis sativus]
Length = 223
Score = 39.3 bits (90), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
VV++G+ AVGK+ ++ R+ R F+ D K TIGV+
Sbjct: 18 VVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVE 51
>gi|406863148|gb|EKD16196.1| Ras GTPase [Marssonina brunnea f. sp. 'multigermtubi' MB_m1]
Length = 212
Score = 39.3 bits (90), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 24/34 (70%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
VV++G+ VGKS+++ R+ R F D K TIGV+
Sbjct: 12 VVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVE 45
>gi|367054586|ref|XP_003657671.1| hypothetical protein THITE_2123570 [Thielavia terrestris NRRL
8126]
gi|347004937|gb|AEO71335.1| hypothetical protein THITE_2123570 [Thielavia terrestris NRRL
8126]
Length = 213
Score = 39.3 bits (90), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 24/34 (70%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
VV++G+ VGKS+++ R+ R F D K TIGV+
Sbjct: 12 VVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVE 45
>gi|358396186|gb|EHK45567.1| secretion-related small GTPase [Trichoderma atroviride IMI
206040]
Length = 212
Score = 39.3 bits (90), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 24/34 (70%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
VV++G+ VGKS+++ R+ R F D K TIGV+
Sbjct: 12 VVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVE 45
>gi|296809015|ref|XP_002844846.1| GTP-binding protein ypt3 [Arthroderma otae CBS 113480]
gi|238844329|gb|EEQ33991.1| GTP-binding protein ypt3 [Arthroderma otae CBS 113480]
Length = 212
Score = 39.3 bits (90), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 24/34 (70%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
VV++G+ VGKS+++ R+ R F D K TIGV+
Sbjct: 14 VVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVE 47
>gi|405964647|gb|EKC30108.1| RAS and EF-hand domain-containing protein [Crassostrea gigas]
Length = 726
Score = 39.3 bits (90), Expect = 0.27, Method: Composition-based stats.
Identities = 16/33 (48%), Positives = 22/33 (66%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
+V+ G+ AVGKSS I R C+G F + T+GV
Sbjct: 529 IVLAGDAAVGKSSFIMRLCKGKFVPNLSSTLGV 561
>gi|400598893|gb|EJP66600.1| Ras family protein [Beauveria bassiana ARSEF 2860]
Length = 212
Score = 39.3 bits (90), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 24/34 (70%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
VV++G+ VGKS+++ R+ R F D K TIGV+
Sbjct: 12 VVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVE 45
>gi|367035076|ref|XP_003666820.1| hypothetical protein MYCTH_2140896 [Myceliophthora thermophila
ATCC 42464]
gi|347014093|gb|AEO61575.1| hypothetical protein MYCTH_2140896 [Myceliophthora thermophila
ATCC 42464]
Length = 213
Score = 39.3 bits (90), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 24/34 (70%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
VV++G+ VGKS+++ R+ R F D K TIGV+
Sbjct: 12 VVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVE 45
>gi|154413028|ref|XP_001579545.1| small GTP-binding protein [Trichomonas vaginalis G3]
gi|121913753|gb|EAY18559.1| small GTP-binding protein, putative [Trichomonas vaginalis G3]
Length = 202
Score = 39.3 bits (90), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 24/38 (63%)
Query: 9 GSIKGTVVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIG 46
S+ +V++G+ VGK+S+I RYC TF D TIG
Sbjct: 6 SSLDLKIVVLGSAFVGKTSIINRYCNSTFIEDTLSTIG 43
>gi|431892315|gb|ELK02755.1| Ras-related protein Rab-25 [Pteropus alecto]
Length = 190
Score = 39.3 bits (90), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 26/39 (66%)
Query: 12 KGTVVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSS 50
G VV++G VGK++++ R+ R F+ D + TIGV+ S
Sbjct: 30 HGWVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFS 68
>gi|425771377|gb|EKV09822.1| GTP-binding protein yptV1 [Penicillium digitatum Pd1]
gi|425776994|gb|EKV15191.1| GTP-binding protein yptV1 [Penicillium digitatum PHI26]
Length = 209
Score = 39.3 bits (90), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 24/34 (70%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
VV++G+ VGKS+++ R+ R F D K TIGV+
Sbjct: 12 VVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVE 45
>gi|414589235|tpg|DAA39806.1| TPA: ras protein RGP1 [Zea mays]
Length = 226
Score = 39.3 bits (90), Expect = 0.27, Method: Composition-based stats.
Identities = 17/34 (50%), Positives = 24/34 (70%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
VV++G+ AVGKS ++ R+ R F D K TIGV+
Sbjct: 20 VVLIGDSAVGKSQLLARFARNQFNLDSKATIGVE 53
>gi|395509354|ref|XP_003758963.1| PREDICTED: dnaJ homolog subfamily C member 27 [Sarcophilus
harrisii]
Length = 300
Score = 39.3 bits (90), Expect = 0.27, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 28/48 (58%)
Query: 10 SIKGTVVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSMIQRYCR 57
S++ V+ +GN VGKS +I+RYC F Y TIG+ + + Y +
Sbjct: 14 SLRIKVISMGNAEVGKSCIIKRYCEKRFVSKYLATIGIDYGVTKVYIK 61
>gi|341879693|gb|EGT35628.1| hypothetical protein CAEBREN_09202 [Caenorhabditis brenneri]
gi|341897534|gb|EGT53469.1| hypothetical protein CAEBREN_20167 [Caenorhabditis brenneri]
Length = 248
Score = 39.3 bits (90), Expect = 0.27, Method: Composition-based stats.
Identities = 14/33 (42%), Positives = 26/33 (78%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
+V+VG+GA GK+S+ QR+ + +F + Y +T+G+
Sbjct: 38 IVVVGDGASGKTSICQRFAKESFDKTYHQTLGL 70
>gi|238483611|ref|XP_002373044.1| Ras GTPase Rab11, putative [Aspergillus flavus NRRL3357]
gi|220701094|gb|EED57432.1| Ras GTPase Rab11, putative [Aspergillus flavus NRRL3357]
gi|391870993|gb|EIT80162.1| GTPase Rab11/YPT3, small G protein superfamily [Aspergillus
oryzae 3.042]
Length = 211
Score = 39.3 bits (90), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 24/34 (70%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
VV++G+ VGKS+++ R+ R F D K TIGV+
Sbjct: 12 VVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVE 45
>gi|392596215|gb|EIW85538.1| GTPase [Coniophora puteana RWD-64-598 SS2]
Length = 211
Score = 39.3 bits (90), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 24/34 (70%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
VV++G+ VGKS+++ R+ R F D K TIGV+
Sbjct: 13 VVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVE 46
>gi|351716004|gb|EHB18923.1| DnaJ-like protein subfamily C member 27 [Heterocephalus glaber]
Length = 273
Score = 39.3 bits (90), Expect = 0.27, Method: Composition-based stats.
Identities = 17/38 (44%), Positives = 24/38 (63%)
Query: 10 SIKGTVVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
S++ V+ +GN VGKS +I+RYC F Y TIG+
Sbjct: 14 SLRIKVISMGNAEVGKSCIIKRYCEKRFVSKYLATIGI 51
>gi|398408387|ref|XP_003855659.1| GTP-binding protein [Zymoseptoria tritici IPO323]
gi|339475543|gb|EGP90635.1| GTP-binding protein [Zymoseptoria tritici IPO323]
Length = 211
Score = 39.3 bits (90), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 24/34 (70%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
VV++G+ VGKS+++ R+ R F D K TIGV+
Sbjct: 12 VVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVE 45
>gi|302784965|ref|XP_002974254.1| rab family GTPase [Selaginella moellendorffii]
gi|300157852|gb|EFJ24476.1| rab family GTPase [Selaginella moellendorffii]
Length = 220
Score = 39.3 bits (90), Expect = 0.27, Method: Composition-based stats.
Identities = 17/34 (50%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
VV++G+ AVGKS ++ R+ R FT + K TIGV+
Sbjct: 14 VVLIGDSAVGKSQLLSRFARDEFTLESKSTIGVE 47
>gi|281365477|ref|NP_647644.2| RabX5 [Drosophila melanogaster]
gi|272455007|gb|AAF47546.2| RabX5 [Drosophila melanogaster]
Length = 277
Score = 39.3 bits (90), Expect = 0.27, Method: Composition-based stats.
Identities = 15/33 (45%), Positives = 24/33 (72%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
V+ VG+ +VGK++++ R+C F +YK TIGV
Sbjct: 67 VIFVGDCSVGKTAIVNRFCYDKFQSNYKATIGV 99
>gi|195587012|ref|XP_002083259.1| GD13452 [Drosophila simulans]
gi|194195268|gb|EDX08844.1| GD13452 [Drosophila simulans]
Length = 277
Score = 39.3 bits (90), Expect = 0.27, Method: Composition-based stats.
Identities = 15/33 (45%), Positives = 24/33 (72%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
V+ VG+ +VGK++++ R+C F +YK TIGV
Sbjct: 67 VIFVGDCSVGKTAIVNRFCYDKFQSNYKATIGV 99
>gi|195490516|ref|XP_002093171.1| GE20932 [Drosophila yakuba]
gi|194179272|gb|EDW92883.1| GE20932 [Drosophila yakuba]
Length = 266
Score = 39.3 bits (90), Expect = 0.27, Method: Composition-based stats.
Identities = 15/33 (45%), Positives = 24/33 (72%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
V+ VG+ +VGK++++ R+C F +YK TIGV
Sbjct: 67 VIFVGDCSVGKTAIVNRFCYDKFQSNYKATIGV 99
>gi|195427185|ref|XP_002061658.1| GK17067 [Drosophila willistoni]
gi|194157743|gb|EDW72644.1| GK17067 [Drosophila willistoni]
Length = 277
Score = 39.3 bits (90), Expect = 0.27, Method: Composition-based stats.
Identities = 15/33 (45%), Positives = 24/33 (72%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
V+ VG+ +VGK++++ R+C F +YK TIGV
Sbjct: 64 VIFVGDCSVGKTAIVNRFCYDKFQSNYKATIGV 96
>gi|194864940|ref|XP_001971181.1| GG14574 [Drosophila erecta]
gi|190652964|gb|EDV50207.1| GG14574 [Drosophila erecta]
Length = 276
Score = 39.3 bits (90), Expect = 0.27, Method: Composition-based stats.
Identities = 15/33 (45%), Positives = 24/33 (72%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
V+ VG+ +VGK++++ R+C F +YK TIGV
Sbjct: 67 VIFVGDCSVGKTAIVNRFCYDKFQSNYKATIGV 99
>gi|66772960|gb|AAY55790.1| IP10363p [Drosophila melanogaster]
Length = 358
Score = 39.3 bits (90), Expect = 0.27, Method: Composition-based stats.
Identities = 15/33 (45%), Positives = 24/33 (72%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
V+ VG+ +VGK++++ R+C F +YK TIGV
Sbjct: 148 VIFVGDCSVGKTAIVNRFCYDKFQSNYKATIGV 180
>gi|145229443|ref|XP_001389030.1| Ras-related protein Rab-11A [Aspergillus niger CBS 513.88]
gi|134055135|emb|CAK37081.1| unnamed protein product [Aspergillus niger]
gi|350638153|gb|EHA26509.1| hypothetical protein ASPNIDRAFT_205975 [Aspergillus niger ATCC
1015]
gi|358366919|dbj|GAA83539.1| Ras GTPase Rab11 [Aspergillus kawachii IFO 4308]
Length = 211
Score = 39.3 bits (90), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 24/34 (70%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
VV++G+ VGKS+++ R+ R F D K TIGV+
Sbjct: 12 VVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVE 45
>gi|380492729|emb|CCF34399.1| Ras-like protein Rab-11B [Colletotrichum higginsianum]
Length = 212
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 24/34 (70%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
VV++G+ VGKS+++ R+ R F D K TIGV+
Sbjct: 12 VVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVE 45
>gi|330923009|ref|XP_003300061.1| hypothetical protein PTT_11209 [Pyrenophora teres f. teres 0-1]
gi|311325975|gb|EFQ91841.1| hypothetical protein PTT_11209 [Pyrenophora teres f. teres 0-1]
gi|451845858|gb|EMD59169.1| hypothetical protein COCSADRAFT_164753 [Cochliobolus sativus
ND90Pr]
Length = 211
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 24/34 (70%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
VV++G+ VGKS+++ R+ R F D K TIGV+
Sbjct: 12 VVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVE 45
>gi|255950668|ref|XP_002566101.1| Pc22g22060 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211593118|emb|CAP99494.1| Pc22g22060 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 209
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 24/34 (70%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
VV++G+ VGKS+++ R+ R F D K TIGV+
Sbjct: 12 VVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVE 45
>gi|453087907|gb|EMF15948.1| ras GTPase Rab11 [Mycosphaerella populorum SO2202]
Length = 213
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 24/34 (70%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
VV++G+ VGKS+++ R+ R F D K TIGV+
Sbjct: 12 VVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVE 45
>gi|388504040|gb|AFK40086.1| unknown [Lotus japonicus]
Length = 199
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 24/34 (70%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
VV++G+ AVGK+ ++ R+ R F D K TIGV+
Sbjct: 18 VVLIGDSAVGKTQLLARFSRNQFNVDSKATIGVE 51
>gi|396477566|ref|XP_003840300.1| similar to ras-related protein Rab-11B [Leptosphaeria maculans
JN3]
gi|312216872|emb|CBX96821.1| similar to ras-related protein Rab-11B [Leptosphaeria maculans
JN3]
Length = 211
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 24/34 (70%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
VV++G+ VGKS+++ R+ R F D K TIGV+
Sbjct: 12 VVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVE 45
>gi|171688708|ref|XP_001909294.1| hypothetical protein [Podospora anserina S mat+]
gi|170944316|emb|CAP70426.1| unnamed protein product [Podospora anserina S mat+]
Length = 211
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 24/34 (70%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
VV++G+ VGKS+++ R+ R F D K TIGV+
Sbjct: 12 VVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVE 45
>gi|255583280|ref|XP_002532404.1| protein with unknown function [Ricinus communis]
gi|223527900|gb|EEF29989.1| protein with unknown function [Ricinus communis]
Length = 223
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 24/34 (70%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
+V++G+ AVGKS ++ R+ R F D K TIGV+
Sbjct: 17 IVLIGDSAVGKSQLLARFARNEFCVDSKATIGVE 50
>gi|268561566|ref|XP_002638358.1| Hypothetical protein CBG18559 [Caenorhabditis briggsae]
Length = 214
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
VV+VG+ VGKS+++ R+ R TF + K TIGV+
Sbjct: 15 VVLVGDSGVGKSNLLSRFTRNTFDLETKSTIGVE 48
>gi|358381001|gb|EHK18677.1| secretion-related small GTPase [Trichoderma virens Gv29-8]
Length = 212
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 24/34 (70%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
VV++G+ VGKS+++ R+ R F D K TIGV+
Sbjct: 12 VVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVE 45
>gi|123423332|ref|XP_001306356.1| small GTP-binding protein [Trichomonas vaginalis G3]
gi|121887925|gb|EAX93426.1| small GTP-binding protein, putative [Trichomonas vaginalis G3]
Length = 198
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 27/37 (72%)
Query: 10 SIKGTVVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIG 46
I G +V+VG+ VGK+S+IQ+Y RG +++ K TIG
Sbjct: 7 PILGRIVLVGDTQVGKTSIIQKYLRGQCSQEQKSTIG 43
>gi|378734873|gb|EHY61332.1| Ras-like protein Rab-11B [Exophiala dermatitidis NIH/UT8656]
Length = 210
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 24/34 (70%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
VV++G+ VGKS+++ R+ R F D K TIGV+
Sbjct: 12 VVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVE 45
>gi|317139974|ref|XP_001817889.2| Ras-related protein Rab-11A [Aspergillus oryzae RIB40]
Length = 211
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 24/34 (70%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
VV++G+ VGKS+++ R+ R F D K TIGV+
Sbjct: 12 VVLIGDSGVGKSNLLSRFTRNEFNLDTKSTIGVE 45
>gi|74834229|emb|CAI44488.1| rab_A73 [Paramecium tetraurelia]
Length = 213
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
+++VG+ VGKSS++ RY + F RDY TIG++
Sbjct: 13 IILVGDQGVGKSSILLRYTKDLFQRDYNVTIGLE 46
>gi|145552015|ref|XP_001461684.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74831212|emb|CAI39263.1| rab_B73 [Paramecium tetraurelia]
gi|124429519|emb|CAK94311.1| unnamed protein product [Paramecium tetraurelia]
Length = 223
Score = 39.3 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 16/34 (47%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
+++VG+ VGKSS++ RY + F RDY TIG++
Sbjct: 13 IILVGDQGVGKSSILLRYTKDLFQRDYNVTIGLE 46
>gi|359806027|ref|NP_001240919.1| uncharacterized protein LOC100775298 [Glycine max]
gi|255640706|gb|ACU20637.1| unknown [Glycine max]
Length = 221
Score = 39.3 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
+VIVG+G GK++ ++R+ G F + Y+ TIGV+
Sbjct: 16 LVIVGDGGTGKTTFVKRHITGEFEKKYEPTIGVE 49
>gi|440638900|gb|ELR08819.1| Ras-like protein Rab-11A [Geomyces destructans 20631-21]
Length = 212
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 24/34 (70%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
VV++G+ VGKS+++ R+ R F D K TIGV+
Sbjct: 12 VVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVE 45
>gi|308480912|ref|XP_003102662.1| hypothetical protein CRE_03222 [Caenorhabditis remanei]
gi|308261096|gb|EFP05049.1| hypothetical protein CRE_03222 [Caenorhabditis remanei]
Length = 71
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 27/37 (72%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSM 51
V+++G+ VGK+S+I+R+ F+ +YK TIGV ++
Sbjct: 14 VLVIGDPGVGKTSIIRRFVHNVFSSNYKTTIGVDFAL 50
>gi|302807861|ref|XP_002985624.1| rab family GTPase [Selaginella moellendorffii]
gi|300146533|gb|EFJ13202.1| rab family GTPase [Selaginella moellendorffii]
Length = 220
Score = 39.3 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 17/34 (50%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
VV++G+ AVGKS ++ R+ R FT + K TIGV+
Sbjct: 14 VVLIGDSAVGKSQLLSRFARDEFTLESKSTIGVE 47
>gi|116779778|gb|ABK21426.1| unknown [Picea sitchensis]
Length = 224
Score = 39.3 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 16/41 (39%), Positives = 27/41 (65%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSMIQRY 55
+VIVG+G GK++ ++R+ G F + Y+ TIGV+ + Y
Sbjct: 19 LVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFY 59
>gi|115438482|ref|NP_001043550.1| Os01g0611100 [Oryza sativa Japonica Group]
gi|75326696|sp|Q7F7I7.1|RAN1_ORYSJ RecName: Full=GTP-binding nuclear protein Ran-1; Short=OsRan1;
AltName: Full=Ras-related nuclear protein 1
gi|205829462|sp|A2WSI7.2|RAN1_ORYSI RecName: Full=GTP-binding nuclear protein Ran-1; Short=OsRan1;
AltName: Full=Ras-related nuclear protein 1
gi|5360231|dbj|BAA34943.1| Ran [Oryza sativa (japonica cultivar-group)]
gi|12382026|dbj|BAB21295.1| putative GTP-binding protein Ran/TC4 [Oryza sativa Japonica
Group]
gi|18146758|dbj|BAB82437.1| small GTP-binding protein (Ran1) [Oryza sativa Japonica Group]
gi|21104675|dbj|BAB93265.1| putative GTP-binding protein Ran/TC4 [Oryza sativa Japonica
Group]
gi|113533081|dbj|BAF05464.1| Os01g0611100 [Oryza sativa Japonica Group]
gi|215704278|dbj|BAG93118.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 221
Score = 39.3 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
+VIVG+G GK++ ++R+ G F + Y+ TIGV+
Sbjct: 16 LVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVE 49
>gi|449529218|ref|XP_004171598.1| PREDICTED: GTP-binding nuclear protein Ran-3-like [Cucumis
sativus]
Length = 221
Score = 39.3 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
+VIVG+G GK++ ++R+ G F + Y+ TIGV+
Sbjct: 16 LVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVE 49
>gi|449464584|ref|XP_004150009.1| PREDICTED: GTP-binding nuclear protein Ran-3-like [Cucumis
sativus]
gi|449468017|ref|XP_004151718.1| PREDICTED: GTP-binding nuclear protein Ran-3-like [Cucumis
sativus]
Length = 221
Score = 39.3 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
+VIVG+G GK++ ++R+ G F + Y+ TIGV+
Sbjct: 16 LVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVE 49
>gi|449441932|ref|XP_004138736.1| PREDICTED: GTP-binding nuclear protein Ran-3-like [Cucumis
sativus]
gi|449514982|ref|XP_004164529.1| PREDICTED: GTP-binding nuclear protein Ran-3-like [Cucumis
sativus]
Length = 221
Score = 39.3 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
+VIVG+G GK++ ++R+ G F + Y+ TIGV+
Sbjct: 16 LVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVE 49
>gi|449300707|gb|EMC96719.1| hypothetical protein BAUCODRAFT_487092 [Baudoinia compniacensis
UAMH 10762]
Length = 212
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 24/34 (70%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
VV++G+ VGKS+++ R+ R F D K TIGV+
Sbjct: 12 VVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVE 45
>gi|2801433|gb|AAB97312.1| salt stress inducible small GTP binding protein Ran1 homolog
[Arabidopsis thaliana]
gi|3559764|gb|AAC34900.1| unknown [Arabidopsis thaliana]
Length = 221
Score = 39.3 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
+VIVG+G GK++ ++R+ G F + Y+ TIGV+
Sbjct: 16 LVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVE 49
>gi|77745485|gb|ABB02641.1| unknown [Solanum tuberosum]
Length = 221
Score = 39.3 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
+VIVG+G GK++ ++R+ G F + Y+ TIGV+
Sbjct: 16 LVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVE 49
>gi|350539783|ref|NP_001234016.1| GTP-binding nuclear protein Ran1 [Solanum lycopersicum]
gi|585777|sp|P38546.1|RAN1_SOLLC RecName: Full=GTP-binding nuclear protein Ran1; AltName:
Full=Ras-related nuclear protein 1
gi|453561|gb|AAC37402.1| Ran protein/TC4 protein [Solanum lycopersicum]
gi|77745509|gb|ABB02653.1| Ran/TC4-like protein [Solanum tuberosum]
gi|82623375|gb|ABB87102.1| Ran protein/TC4 protein-like [Solanum tuberosum]
Length = 221
Score = 39.3 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
+VIVG+G GK++ ++R+ G F + Y+ TIGV+
Sbjct: 16 LVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVE 49
>gi|15240474|ref|NP_200330.1| GTP-binding nuclear protein Ran-3 [Arabidopsis thaliana]
gi|76789666|sp|Q8H156.2|RAN3_ARATH RecName: Full=GTP-binding nuclear protein Ran-3; AltName:
Full=Ras-related nuclear protein 3
gi|2149051|gb|AAB58478.1| small Ras-like GTP-binding protein [Arabidopsis thaliana]
gi|9758116|dbj|BAB08588.1| small Ras-like GTP-binding protein [Arabidopsis thaliana]
gi|14596017|gb|AAK68736.1| small Ras-like GTP-binding protein [Arabidopsis thaliana]
gi|15215578|gb|AAK91334.1| AT5g55190/MCO15_14 [Arabidopsis thaliana]
gi|21435991|gb|AAM51573.1| AT5g55190/MCO15_14 [Arabidopsis thaliana]
gi|332009215|gb|AED96598.1| GTP-binding nuclear protein Ran-3 [Arabidopsis thaliana]
Length = 221
Score = 39.3 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
+VIVG+G GK++ ++R+ G F + Y+ TIGV+
Sbjct: 16 LVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVE 49
>gi|1172836|sp|P41919.1|RANB1_TOBAC RecName: Full=GTP-binding nuclear protein Ran-B1
gi|496272|gb|AAA34109.1| small ras-related protein [Nicotiana tabacum]
Length = 221
Score = 39.3 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
+VIVG+G GK++ ++R+ G F + Y+ TIGV+
Sbjct: 16 LVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVE 49
>gi|350537019|ref|NP_001234020.1| GTP-binding nuclear protein Ran2 [Solanum lycopersicum]
gi|350537083|ref|NP_001234023.1| GTP-binding nuclear protein Ran2 [Solanum lycopersicum]
gi|585778|sp|P38547.1|RAN2_SOLLC RecName: Full=GTP-binding nuclear protein Ran2; AltName:
Full=Ras-related nuclear protein 2
gi|453563|gb|AAC37403.1| Ran protein/TC4 protein [Solanum lycopersicum]
gi|453565|gb|AAC37404.1| Ran protein/TC4 protein [Solanum lycopersicum]
Length = 221
Score = 39.3 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
+VIVG+G GK++ ++R+ G F + Y+ TIGV+
Sbjct: 16 LVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVE 49
>gi|1172835|sp|P41918.1|RANA1_TOBAC RecName: Full=GTP-binding nuclear protein Ran-A1
gi|496268|gb|AAA73563.1| GTP-binding protein [Nicotiana tabacum]
Length = 221
Score = 39.3 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
+VIVG+G GK++ ++R+ G F + Y+ TIGV+
Sbjct: 16 LVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVE 49
>gi|15241245|ref|NP_197502.1| GTP-binding nuclear protein Ran-2 [Arabidopsis thaliana]
gi|297808067|ref|XP_002871917.1| hypothetical protein ARALYDRAFT_910041 [Arabidopsis lyrata subsp.
lyrata]
gi|21431813|sp|P41917.3|RAN2_ARATH RecName: Full=GTP-binding nuclear protein Ran-2; AltName:
Full=Ras-related nuclear protein 2
gi|13878149|gb|AAK44152.1|AF370337_1 putative RAN2 small Ras GTP-binding nuclear protein Ran-2
[Arabidopsis thaliana]
gi|17104565|gb|AAL34171.1| putative RAN2 small Ras GTP-binding nuclear protein Ran-2
[Arabidopsis thaliana]
gi|23306348|gb|AAN17401.1| RAN2 small Ras-like GTP-binding nuclear protein (Ran-2)
[Arabidopsis thaliana]
gi|23397041|gb|AAN31806.1| putative RAN2 small Ras GTP-binding nuclear protein (Ran-2)
[Arabidopsis thaliana]
gi|30023678|gb|AAP13372.1| At5g20020 [Arabidopsis thaliana]
gi|110741937|dbj|BAE98909.1| small Ras-like GTP-binding protein [Arabidopsis thaliana]
gi|297317754|gb|EFH48176.1| hypothetical protein ARALYDRAFT_910041 [Arabidopsis lyrata subsp.
lyrata]
gi|332005397|gb|AED92780.1| GTP-binding nuclear protein Ran-2 [Arabidopsis thaliana]
Length = 221
Score = 39.3 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
+VIVG+G GK++ ++R+ G F + Y+ TIGV+
Sbjct: 16 LVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVE 49
>gi|409972489|gb|JAA00448.1| uncharacterized protein, partial [Phleum pratense]
Length = 238
Score = 39.3 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
+VIVG+G GK++ ++R+ G F + Y+ TIGV+
Sbjct: 33 LVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVE 66
>gi|409972365|gb|JAA00386.1| uncharacterized protein, partial [Phleum pratense]
Length = 226
Score = 39.3 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
+VIVG+G GK++ ++R+ G F + Y+ TIGV+
Sbjct: 21 LVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVE 54
>gi|409972207|gb|JAA00307.1| uncharacterized protein, partial [Phleum pratense]
Length = 230
Score = 39.3 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
+VIVG+G GK++ ++R+ G F + Y+ TIGV+
Sbjct: 25 LVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVE 58
>gi|409971845|gb|JAA00126.1| uncharacterized protein, partial [Phleum pratense]
Length = 229
Score = 39.3 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
+VIVG+G GK++ ++R+ G F + Y+ TIGV+
Sbjct: 24 LVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVE 57
>gi|409971707|gb|JAA00057.1| uncharacterized protein, partial [Phleum pratense]
Length = 246
Score = 39.3 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
+VIVG+G GK++ ++R+ G F + Y+ TIGV+
Sbjct: 41 LVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVE 74
>gi|399163165|gb|AFP33158.1| rab-28, partial [Caenorhabditis elegans]
Length = 247
Score = 39.3 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 14/33 (42%), Positives = 26/33 (78%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
+V+VG+GA GK+S+ QR+ + +F + Y +T+G+
Sbjct: 37 IVVVGDGASGKTSICQRFAKESFDKSYHQTLGL 69
>gi|388519813|gb|AFK47968.1| unknown [Lotus japonicus]
Length = 221
Score = 39.3 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
+VIVG+G GK++ ++R+ G F + Y+ TIGV+
Sbjct: 16 LVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVE 49
>gi|388518503|gb|AFK47313.1| unknown [Lotus japonicus]
Length = 221
Score = 39.3 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
+VIVG+G GK++ ++R+ G F + Y+ TIGV+
Sbjct: 16 LVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVE 49
>gi|388504728|gb|AFK40430.1| unknown [Lotus japonicus]
Length = 248
Score = 39.3 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
+VIVG+G GK++ ++R+ G F + Y+ TIGV+
Sbjct: 44 LVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVE 77
>gi|388493522|gb|AFK34827.1| unknown [Medicago truncatula]
Length = 221
Score = 39.3 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
+VIVG+G GK++ ++R+ G F + Y+ TIGV+
Sbjct: 16 LVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVE 49
>gi|380690702|gb|AFD93409.1| Ras-like GTP-binding protein 3A, partial [Dimocarpus longan]
Length = 220
Score = 39.3 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
+VIVG+G GK++ ++R+ G F + Y+ TIGV+
Sbjct: 15 LVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVE 48
>gi|380690684|gb|AFD93402.1| Ras-like GTP-binding protein 3G-1 [Dimocarpus longan]
Length = 221
Score = 39.3 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
+VIVG+G GK++ ++R+ G F + Y+ TIGV+
Sbjct: 16 LVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVE 49
>gi|380690682|gb|AFD93401.1| Ras-like GTP-binding protein 3F-1 [Dimocarpus longan]
Length = 221
Score = 39.3 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
+VIVG+G GK++ ++R+ G F + Y+ TIGV+
Sbjct: 16 LVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVE 49
>gi|374412410|gb|AEZ49163.1| Ran [Wolffia australiana]
Length = 217
Score = 39.3 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
+VIVG+G GK++ ++R+ G F + Y+ TIGV+
Sbjct: 12 LVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVE 45
>gi|373882304|gb|AEY78527.1| Ras-like GTP-binding nuclear protein Ran3B, partial [Dimocarpus
longan]
Length = 220
Score = 39.3 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
+VIVG+G GK++ ++R+ G F + Y+ TIGV+
Sbjct: 15 LVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVE 48
>gi|356507750|ref|XP_003522627.1| PREDICTED: GTP-binding nuclear protein Ran-3-like [Glycine max]
Length = 221
Score = 39.3 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
+VIVG+G GK++ ++R+ G F + Y+ TIGV+
Sbjct: 16 LVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVE 49
>gi|356515468|ref|XP_003526422.1| PREDICTED: GTP-binding nuclear protein Ran-3-like [Glycine max]
Length = 221
Score = 39.3 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
+VIVG+G GK++ ++R+ G F + Y+ TIGV+
Sbjct: 16 LVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVE 49
>gi|356507752|ref|XP_003522628.1| PREDICTED: GTP-binding nuclear protein Ran-3-like [Glycine max]
gi|356507754|ref|XP_003522629.1| PREDICTED: GTP-binding nuclear protein Ran-3-like [Glycine max]
Length = 221
Score = 39.3 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
+VIVG+G GK++ ++R+ G F + Y+ TIGV+
Sbjct: 16 LVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVE 49
>gi|357466305|ref|XP_003603437.1| GTP-binding nuclear protein Ran-A1 [Medicago truncatula]
gi|355492485|gb|AES73688.1| GTP-binding nuclear protein Ran-A1 [Medicago truncatula]
Length = 778
Score = 39.3 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
+VIVG+G GK++ ++R+ G F + Y+ TIGV+
Sbjct: 16 LVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVE 49
Score = 39.3 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
+VIVG+G GK++ ++R+ G F + Y+ TIGV+
Sbjct: 292 LVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVE 325
Score = 39.3 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
+VIVG+G GK++ ++R+ G F + Y+ TIGV+
Sbjct: 573 LVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVE 606
>gi|344189999|gb|AEM97826.1| Ran3E-1 [Dimocarpus longan]
Length = 221
Score = 39.3 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
+VIVG+G GK++ ++R+ G F + Y+ TIGV+
Sbjct: 16 LVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVE 49
>gi|344189995|gb|AEM97824.1| Ran3D-1 [Dimocarpus longan]
gi|344189997|gb|AEM97825.1| Ran3D-2 [Dimocarpus longan]
Length = 221
Score = 39.3 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
+VIVG+G GK++ ++R+ G F + Y+ TIGV+
Sbjct: 16 LVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVE 49
>gi|344189989|gb|AEM97821.1| Ran3C-1 [Dimocarpus longan]
gi|344189991|gb|AEM97822.1| Ran3C-2 [Dimocarpus longan]
gi|344189993|gb|AEM97823.1| Ran3C-3 [Dimocarpus longan]
Length = 221
Score = 39.3 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
+VIVG+G GK++ ++R+ G F + Y+ TIGV+
Sbjct: 16 LVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVE 49
>gi|344189955|gb|AEM97804.1| Ran3A-1 [Dimocarpus longan]
gi|344189957|gb|AEM97805.1| Ran3A-2 [Dimocarpus longan]
gi|344189959|gb|AEM97806.1| Ran3A-3 [Dimocarpus longan]
gi|344189961|gb|AEM97807.1| Ran3A-4 [Dimocarpus longan]
gi|344189963|gb|AEM97808.1| Ran3A-5 [Dimocarpus longan]
gi|344189965|gb|AEM97809.1| Ran3A-6 [Dimocarpus longan]
gi|344189967|gb|AEM97810.1| Ran3A-7 [Dimocarpus longan]
gi|344189969|gb|AEM97811.1| Ran3A-8 [Dimocarpus longan]
gi|344189971|gb|AEM97812.1| Ran3A-9 [Dimocarpus longan]
gi|344189973|gb|AEM97813.1| Ran3A-10 [Dimocarpus longan]
gi|344189975|gb|AEM97814.1| Ran3A-11 [Dimocarpus longan]
gi|380690692|gb|AFD93406.1| Ras-like GTP-binding protein 3A-14 [Dimocarpus longan]
gi|380690694|gb|AFD93407.1| Ras-like GTP-binding protein 3A-13 [Dimocarpus longan]
gi|391358664|gb|AFM43803.1| Ran3A-12 [Dimocarpus longan]
Length = 221
Score = 39.3 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
+VIVG+G GK++ ++R+ G F + Y+ TIGV+
Sbjct: 16 LVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVE 49
>gi|341218174|gb|AEK78856.1| ran [Lepidium latifolium]
Length = 221
Score = 39.3 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
+VIVG+G GK++ ++R+ G F + Y+ TIGV+
Sbjct: 16 LVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVE 49
>gi|325168116|gb|ADK70386.2| Ran3B [Dimocarpus longan]
gi|344189977|gb|AEM97815.1| Ran3B-2 [Dimocarpus longan]
gi|344189979|gb|AEM97816.1| Ran3B-3 [Dimocarpus longan]
gi|344189981|gb|AEM97817.1| Ran3B-4 [Dimocarpus longan]
gi|344189983|gb|AEM97818.1| Ran3B-5 [Dimocarpus longan]
gi|344189985|gb|AEM97819.1| Ran3B-6 [Dimocarpus longan]
gi|344189987|gb|AEM97820.1| Ran3B-7 [Dimocarpus longan]
gi|380690688|gb|AFD93404.1| Ras-like GTP-binding protein 3B-8 [Dimocarpus longan]
gi|380690690|gb|AFD93405.1| Ras-like GTP-binding protein 3B-9 [Dimocarpus longan]
Length = 221
Score = 39.3 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
+VIVG+G GK++ ++R+ G F + Y+ TIGV+
Sbjct: 16 LVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVE 49
>gi|297808065|ref|XP_002871916.1| hypothetical protein ARALYDRAFT_910039 [Arabidopsis lyrata subsp.
lyrata]
gi|297317753|gb|EFH48175.1| hypothetical protein ARALYDRAFT_910039 [Arabidopsis lyrata subsp.
lyrata]
Length = 221
Score = 39.3 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
+VIVG+G GK++ ++R+ G F + Y+ TIGV+
Sbjct: 16 LVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVE 49
>gi|297792995|ref|XP_002864382.1| hypothetical protein ARALYDRAFT_918663 [Arabidopsis lyrata subsp.
lyrata]
gi|297310217|gb|EFH40641.1| hypothetical protein ARALYDRAFT_918663 [Arabidopsis lyrata subsp.
lyrata]
Length = 221
Score = 39.3 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
+VIVG+G GK++ ++R+ G F + Y+ TIGV+
Sbjct: 16 LVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVE 49
>gi|296081996|emb|CBI21001.3| unnamed protein product [Vitis vinifera]
Length = 305
Score = 39.3 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
+VIVG+G GK++ ++R+ G F + Y+ TIGV+
Sbjct: 100 LVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVE 133
>gi|296081995|emb|CBI21000.3| unnamed protein product [Vitis vinifera]
Length = 254
Score = 39.3 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
+VIVG+G GK++ ++R+ G F + Y+ TIGV+
Sbjct: 49 LVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVE 82
>gi|261411636|gb|ACX81221.1| Ras-related GTP binding protein [Lepidium latifolium]
Length = 223
Score = 39.3 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
+VIVG+G GK++ ++R+ G F + Y+ TIGV+
Sbjct: 16 LVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVE 49
>gi|351724461|ref|NP_001238082.1| uncharacterized protein LOC100500437 [Glycine max]
gi|255630335|gb|ACU15524.1| unknown [Glycine max]
Length = 221
Score = 39.3 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
+VIVG+G GK++ ++R+ G F + Y+ TIGV+
Sbjct: 16 LVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVE 49
>gi|351722367|ref|NP_001235194.1| uncharacterized protein LOC100305680 [Glycine max]
gi|255626289|gb|ACU13489.1| unknown [Glycine max]
Length = 221
Score = 39.3 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
+VIVG+G GK++ ++R+ G F + Y+ TIGV+
Sbjct: 16 LVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVE 49
>gi|225442825|ref|XP_002285307.1| PREDICTED: GTP-binding nuclear protein Ran-3-like [Vitis
vinifera]
Length = 221
Score = 39.3 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
+VIVG+G GK++ ++R+ G F + Y+ TIGV+
Sbjct: 16 LVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVE 49
>gi|225430204|ref|XP_002284971.1| PREDICTED: GTP-binding nuclear protein Ran-3-like [Vitis
vinifera]
Length = 221
Score = 39.3 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
+VIVG+G GK++ ++R+ G F + Y+ TIGV+
Sbjct: 16 LVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVE 49
>gi|225430202|ref|XP_002284967.1| PREDICTED: GTP-binding nuclear protein Ran-3-like [Vitis
vinifera]
gi|225445410|ref|XP_002285018.1| PREDICTED: GTP-binding nuclear protein Ran-3-like [Vitis
vinifera]
Length = 221
Score = 39.3 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
+VIVG+G GK++ ++R+ G F + Y+ TIGV+
Sbjct: 16 LVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVE 49
>gi|255548998|ref|XP_002515555.1| ran, putative [Ricinus communis]
gi|223545499|gb|EEF47004.1| ran, putative [Ricinus communis]
Length = 221
Score = 39.3 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
+VIVG+G GK++ ++R+ G F + Y+ TIGV+
Sbjct: 16 LVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVE 49
>gi|224089154|ref|XP_002308648.1| predicted protein [Populus trichocarpa]
gi|222854624|gb|EEE92171.1| predicted protein [Populus trichocarpa]
Length = 221
Score = 39.3 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
+VIVG+G GK++ ++R+ G F + Y+ TIGV+
Sbjct: 16 LVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVE 49
>gi|224069898|ref|XP_002303077.1| predicted protein [Populus trichocarpa]
gi|222844803|gb|EEE82350.1| predicted protein [Populus trichocarpa]
Length = 218
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
+V++G+ AVGKS+++ R+ R F + K TIGV+
Sbjct: 18 IVVIGDSAVGKSNLLSRFARNEFDSNSKATIGVE 51
>gi|217071112|gb|ACJ83916.1| unknown [Medicago truncatula]
Length = 221
Score = 39.3 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
+VIVG+G GK++ ++R+ G F + Y+ TIGV+
Sbjct: 16 LVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVE 49
>gi|226510588|ref|NP_001149221.1| LOC100282843 [Zea mays]
gi|195625552|gb|ACG34606.1| GTP-binding nuclear protein Ran-A1 [Zea mays]
Length = 221
Score = 39.3 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
+VIVG+G GK++ ++R+ G F + Y+ TIGV+
Sbjct: 16 LVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVE 49
>gi|192913008|gb|ACF06612.1| GTP-binding nuclear protein Ran-A1 [Elaeis guineensis]
Length = 221
Score = 39.3 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
+VIVG+G GK++ ++R+ G F + Y+ TIGV+
Sbjct: 16 LVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVE 49
>gi|171854679|dbj|BAG16529.1| putative Ran/TC4 protein [Capsicum chinense]
Length = 221
Score = 39.3 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
+VIVG+G GK++ ++R+ G F + Y+ TIGV+
Sbjct: 16 LVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVE 49
>gi|87046111|gb|ABD17865.1| putative RAN2 small Ras GTP-binding nuclear protein [Allium
sativum]
Length = 220
Score = 39.3 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
+VIVG+G GK++ ++R+ G F + Y+ TIGV+
Sbjct: 16 LVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVE 49
>gi|87046113|gb|ABD17866.1| etiolation seedling like-RAN2 small Ras GTP-binding nuclear
protein [Brassica napus]
Length = 221
Score = 39.3 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
+VIVG+G GK++ ++R+ G F + Y+ TIGV+
Sbjct: 16 LVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVE 49
>gi|87046109|gb|ABD17864.1| putative RAN2 small Ras GTP-binding nuclear protein [Allium cepa]
Length = 221
Score = 39.3 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
+VIVG+G GK++ ++R+ G F + Y+ TIGV+
Sbjct: 16 LVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVE 49
>gi|168001922|ref|XP_001753663.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162695070|gb|EDQ81415.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 216
Score = 39.3 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 16/38 (42%), Positives = 26/38 (68%)
Query: 11 IKGTVVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
I +VIVG+G GK++ ++R+ G F + Y+ TIGV+
Sbjct: 6 ISFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVE 43
>gi|168010017|ref|XP_001757701.1| ran-family small GTPase [Physcomitrella patens subsp. patens]
gi|162690977|gb|EDQ77341.1| ran-family small GTPase [Physcomitrella patens subsp. patens]
Length = 223
Score = 39.3 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
+VIVG+G GK++ ++R+ G F + Y+ TIGV+
Sbjct: 17 LVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVE 50
>gi|168016452|ref|XP_001760763.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162688123|gb|EDQ74502.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 275
Score = 39.3 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
+VIVG+G GK++ ++R+ G F + Y+ TIGV+
Sbjct: 69 LVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVE 102
>gi|168054068|ref|XP_001779455.1| ran-family small GTPase [Physcomitrella patens subsp. patens]
gi|162669140|gb|EDQ55733.1| ran-family small GTPase [Physcomitrella patens subsp. patens]
Length = 223
Score = 39.3 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
+VIVG+G GK++ ++R+ G F + Y+ TIGV+
Sbjct: 17 LVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVE 50
>gi|224141865|ref|XP_002324281.1| predicted protein [Populus trichocarpa]
gi|224143088|ref|XP_002324846.1| predicted protein [Populus trichocarpa]
gi|118484008|gb|ABK93891.1| unknown [Populus trichocarpa]
gi|118488691|gb|ABK96156.1| unknown [Populus trichocarpa]
gi|222865715|gb|EEF02846.1| predicted protein [Populus trichocarpa]
gi|222866280|gb|EEF03411.1| predicted protein [Populus trichocarpa]
Length = 221
Score = 39.3 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
+VIVG+G GK++ ++R+ G F + Y+ TIGV+
Sbjct: 16 LVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVE 49
>gi|118484830|gb|ABK94282.1| unknown [Populus trichocarpa]
Length = 221
Score = 39.3 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
+VIVG+G GK++ ++R+ G F + Y+ TIGV+
Sbjct: 16 LVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVE 49
>gi|224092430|ref|XP_002309606.1| predicted protein [Populus trichocarpa]
gi|118482571|gb|ABK93206.1| unknown [Populus trichocarpa]
gi|222855582|gb|EEE93129.1| predicted protein [Populus trichocarpa]
Length = 221
Score = 39.3 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
+VIVG+G GK++ ++R+ G F + Y+ TIGV+
Sbjct: 16 LVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVE 49
>gi|116794384|gb|ABK27124.1| unknown [Picea sitchensis]
gi|224286250|gb|ACN40834.1| unknown [Picea sitchensis]
Length = 221
Score = 39.3 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
+VIVG+G GK++ ++R+ G F + Y+ TIGV+
Sbjct: 15 LVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVE 48
>gi|116783753|gb|ABK23073.1| unknown [Picea sitchensis]
Length = 220
Score = 39.3 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
+VIVG+G GK++ ++R+ G F + Y+ TIGV+
Sbjct: 15 LVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVE 48
>gi|297738907|emb|CBI28152.3| unnamed protein product [Vitis vinifera]
Length = 260
Score = 39.3 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
+VIVG+G GK++ ++R+ G F + Y+ TIGV+
Sbjct: 55 LVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVE 88
>gi|297743387|emb|CBI36254.3| unnamed protein product [Vitis vinifera]
Length = 267
Score = 39.3 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
+VIVG+G GK++ ++R+ G F + Y+ TIGV+
Sbjct: 62 LVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVE 95
>gi|388492898|gb|AFK34515.1| unknown [Medicago truncatula]
Length = 221
Score = 39.3 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
+VIVG+G GK++ ++R+ G F + Y+ TIGV+
Sbjct: 16 LVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVE 49
>gi|217075568|gb|ACJ86144.1| unknown [Medicago truncatula]
Length = 221
Score = 39.3 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
+VIVG+G GK++ ++R+ G F + Y+ TIGV+
Sbjct: 16 LVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVE 49
>gi|217071244|gb|ACJ83982.1| unknown [Medicago truncatula]
gi|388508544|gb|AFK42338.1| unknown [Medicago truncatula]
Length = 221
Score = 39.3 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
+VIVG+G GK++ ++R+ G F + Y+ TIGV+
Sbjct: 16 LVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVE 49
>gi|123192431|gb|ABM73376.1| Ran1 [Pisum sativum]
Length = 221
Score = 39.3 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
+VIVG+G GK++ ++R+ G F + Y+ TIGV+
Sbjct: 16 LVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVE 49
>gi|48249480|gb|AAT40986.1| RAN [Nicotiana sylvestris]
gi|48249482|gb|AAT40987.1| RAN [Nicotiana sylvestris]
Length = 221
Score = 39.3 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
+VIVG+G GK++ ++R+ G F + Y+ TIGV+
Sbjct: 16 LVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVE 49
>gi|10334503|emb|CAC10213.1| GTP-binding protein [Cicer arietinum]
Length = 221
Score = 39.3 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
+VIVG+G GK++ ++R+ G F + Y+ TIGV+
Sbjct: 16 LVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVE 49
>gi|1668706|emb|CAA66048.1| atran2 [Arabidopsis thaliana]
Length = 221
Score = 39.3 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
+VIVG+G GK++ ++R+ G F + Y+ TIGV+
Sbjct: 16 LVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVE 49
>gi|20149262|gb|AAM12880.1|AF495716_1 GTP-binding protein [Helianthus annuus]
Length = 221
Score = 39.3 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
+VIVG+G GK++ ++R+ G F + Y+ TIGV+
Sbjct: 16 LVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVE 49
>gi|23397164|gb|AAN31865.1| putative small Ras GTP-binding protein [Arabidopsis thaliana]
Length = 221
Score = 39.3 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
+VIVG+G GK++ ++R+ G F + Y+ TIGV+
Sbjct: 16 LVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVE 49
>gi|115465581|ref|NP_001056390.1| Os05g0574500 [Oryza sativa Japonica Group]
gi|75326805|sp|Q7GD79.1|RAN2_ORYSJ RecName: Full=GTP-binding nuclear protein Ran-2; Short=OsRan2;
AltName: Full=Ras-related nuclear protein 2
gi|205829396|sp|A2Y7R5.1|RAN2_ORYSI RecName: Full=GTP-binding nuclear protein Ran-2; Short=OsRan2;
AltName: Full=Ras-related nuclear protein 2
gi|5360230|dbj|BAA81911.1| Ran [Oryza sativa (japonica cultivar-group)]
gi|18146760|dbj|BAB82438.1| small GTP-binding protein (Ran2) [Oryza sativa Japonica Group]
gi|50080250|gb|AAT69585.1| GTP-binding nuclear protein RAN-B1 [Oryza sativa Japonica Group]
gi|113579941|dbj|BAF18304.1| Os05g0574500 [Oryza sativa Japonica Group]
gi|125553416|gb|EAY99125.1| hypothetical protein OsI_21085 [Oryza sativa Indica Group]
gi|197245026|dbj|BAG69138.1| GTP-binding nuclear protein Ran-1 [Oryza sativa Japonica Group]
gi|215692641|dbj|BAG88061.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215704362|dbj|BAG93796.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222632647|gb|EEE64779.1| hypothetical protein OsJ_19635 [Oryza sativa Japonica Group]
Length = 221
Score = 39.3 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
+VIVG+G GK++ ++R+ G F + Y+ TIGV+
Sbjct: 16 LVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVE 49
>gi|585783|sp|P38548.1|RAN_VICFA RecName: Full=GTP-binding nuclear protein Ran/TC4
gi|395072|emb|CAA80845.1| guanine nucleotide regulatory protein [Vicia faba]
Length = 221
Score = 39.3 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
+VIVG+G GK++ ++R+ G F + Y+ TIGV+
Sbjct: 16 LVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVE 49
>gi|15241243|ref|NP_197501.1| GTP-binding nuclear protein Ran-1 [Arabidopsis thaliana]
gi|1172833|sp|P41916.1|RAN1_ARATH RecName: Full=GTP-binding nuclear protein Ran-1; AltName:
Full=Ras-related nuclear protein 1
gi|16226505|gb|AAL16185.1|AF428417_1 AT5g20010/F28I16_160 [Arabidopsis thaliana]
gi|495729|gb|AAA32851.1| small ras-related protein [Arabidopsis thaliana]
gi|2058278|emb|CAA66047.1| atran1 [Arabidopsis thaliana]
gi|21618037|gb|AAM67087.1| RAN1 small Ras-like GTP-binding nuclear protein Ran-1
[Arabidopsis thaliana]
gi|21928047|gb|AAM78052.1| AT5g20010/F28I16_160 [Arabidopsis thaliana]
gi|332005396|gb|AED92779.1| GTP-binding nuclear protein Ran-1 [Arabidopsis thaliana]
Length = 221
Score = 39.3 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
+VIVG+G GK++ ++R+ G F + Y+ TIGV+
Sbjct: 16 LVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVE 49
>gi|348574860|ref|XP_003473208.1| PREDICTED: LOW QUALITY PROTEIN: dnaJ homolog subfamily C member
27-like [Cavia porcellus]
Length = 273
Score = 39.3 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 17/38 (44%), Positives = 24/38 (63%)
Query: 10 SIKGTVVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
S++ V+ +GN VGKS +I+RYC F Y TIG+
Sbjct: 14 SLRIKVISMGNAEVGKSCIIKRYCEKRFVSKYLATIGI 51
>gi|290981764|ref|XP_002673601.1| rab family small GTPase [Naegleria gruberi]
gi|284087186|gb|EFC40857.1| rab family small GTPase [Naegleria gruberi]
Length = 206
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 23/33 (69%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
++++G+ +VGK+S + R+C G F Y +IGV
Sbjct: 17 IIVIGDVSVGKTSFVSRFCEGEFKESYPSSIGV 49
>gi|212532303|ref|XP_002146308.1| Ras GTPase Rab11, putative [Talaromyces marneffei ATCC 18224]
gi|212532305|ref|XP_002146309.1| Ras GTPase Rab11, putative [Talaromyces marneffei ATCC 18224]
gi|242775273|ref|XP_002478610.1| Ras GTPase Rab11, putative [Talaromyces stipitatus ATCC 10500]
gi|210071672|gb|EEA25761.1| Ras GTPase Rab11, putative [Talaromyces marneffei ATCC 18224]
gi|210071673|gb|EEA25762.1| Ras GTPase Rab11, putative [Talaromyces marneffei ATCC 18224]
gi|218722229|gb|EED21647.1| Ras GTPase Rab11, putative [Talaromyces stipitatus ATCC 10500]
Length = 211
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 24/34 (70%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
VV++G+ VGKS+++ R+ R F D K TIGV+
Sbjct: 12 VVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVE 45
>gi|198425868|ref|XP_002124344.1| PREDICTED: similar to RAS and EF hand domain containing [Ciona
intestinalis]
Length = 728
Score = 39.3 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 18/37 (48%), Positives = 22/37 (59%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSM 51
VV VGN VGK+S IQ++ +FT TIGV M
Sbjct: 536 VVFVGNSGVGKTSFIQQFVNSSFTSSISATIGVDYQM 572
>gi|123409263|ref|XP_001303369.1| Ras family protein [Trichomonas vaginalis G3]
gi|121884743|gb|EAX90439.1| Ras family protein [Trichomonas vaginalis G3]
Length = 201
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 29/47 (61%)
Query: 7 LRGSIKGTVVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSMIQ 53
+ ++K +V++GN VGK+S++Q Y G+ +++ TIG IQ
Sbjct: 1 MSETLKTKIVLIGNSGVGKTSIVQSYKNGSIPQNHLPTIGADQMQIQ 47
>gi|358255041|dbj|GAA56733.1| Ras-related protein Rab-11A [Clonorchis sinensis]
Length = 227
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 28/45 (62%)
Query: 14 TVVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSMIQRYCRG 58
TVV+VG+ VGKS+++ R+ + F D + TIGV+ + C G
Sbjct: 75 TVVLVGDSGVGKSNLLSRFVKNEFNLDSRSTIGVEFASKTVKCEG 119
>gi|290990744|ref|XP_002677996.1| rab family small GTPase [Naegleria gruberi]
gi|284091606|gb|EFC45252.1| rab family small GTPase [Naegleria gruberi]
Length = 290
Score = 39.3 bits (90), Expect = 0.30, Method: Composition-based stats.
Identities = 16/33 (48%), Positives = 24/33 (72%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
V+IVG+G VGK+S I+R+ F + Y +T+GV
Sbjct: 48 VIIVGDGTVGKTSTIRRFTEDEFQQSYVRTVGV 80
>gi|148669433|gb|EDL01380.1| RIKEN cDNA C330021A05, isoform CRA_b [Mus musculus]
Length = 305
Score = 39.3 bits (90), Expect = 0.30, Method: Composition-based stats.
Identities = 17/38 (44%), Positives = 24/38 (63%)
Query: 10 SIKGTVVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
S++ V+ +GN VGKS +I+RYC F Y TIG+
Sbjct: 14 SLRIKVISMGNAEVGKSCIIKRYCEKRFVSKYLATIGI 51
>gi|402084201|gb|EJT79219.1| Ras-like protein Rab-11A [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 211
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 24/34 (70%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
VV++G+ VGKS+++ R+ R F D K TIGV+
Sbjct: 12 VVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVE 45
>gi|26340008|dbj|BAC33667.1| unnamed protein product [Mus musculus]
Length = 273
Score = 39.3 bits (90), Expect = 0.30, Method: Composition-based stats.
Identities = 17/38 (44%), Positives = 24/38 (63%)
Query: 10 SIKGTVVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
S++ V+ +GN VGKS +I+RYC F Y TIG+
Sbjct: 14 SLRIKVISMGNAEVGKSCIIKRYCEKRFVSKYLATIGI 51
>gi|17542952|ref|NP_501609.1| Protein RAB-28 [Caenorhabditis elegans]
gi|3880725|emb|CAA21582.1| Protein RAB-28 [Caenorhabditis elegans]
Length = 248
Score = 39.3 bits (90), Expect = 0.30, Method: Composition-based stats.
Identities = 14/33 (42%), Positives = 26/33 (78%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
+V+VG+GA GK+S+ QR+ + +F + Y +T+G+
Sbjct: 38 IVVVGDGASGKTSICQRFAKESFDKSYHQTLGL 70
>gi|301625288|ref|XP_002941843.1| PREDICTED: alpha-1,3-mannosyl-glycoprotein
4-beta-N-acetylglucosaminyltransferase B-like [Xenopus
(Silurana) tropicalis]
Length = 1038
Score = 39.3 bits (90), Expect = 0.30, Method: Composition-based stats.
Identities = 16/40 (40%), Positives = 26/40 (65%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSMIQR 54
+V+VGN +VGK+S ++R+C G+F T+G + QR
Sbjct: 494 IVLVGNSSVGKTSFLRRFCDGSFHPGTSATVGQVVDVYQR 533
>gi|157113661|ref|XP_001652043.1| rab [Aedes aegypti]
gi|108877625|gb|EAT41850.1| AAEL006540-PA [Aedes aegypti]
Length = 225
Score = 39.3 bits (90), Expect = 0.30, Method: Composition-based stats.
Identities = 16/33 (48%), Positives = 23/33 (69%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
V+ VG+ A GKSS++ R+C F +Y+ TIGV
Sbjct: 73 VIFVGDVATGKSSLVNRFCHEIFDAEYRGTIGV 105
>gi|431900156|gb|ELK08070.1| Ras-related protein Rab-11B [Pteropus alecto]
Length = 226
Score = 39.3 bits (90), Expect = 0.31, Method: Composition-based stats.
Identities = 16/35 (45%), Positives = 25/35 (71%)
Query: 14 TVVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
TVV++G+ VGKS+++ R+ R F + K TIGV+
Sbjct: 21 TVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVE 55
>gi|70887607|ref|NP_694722.2| dnaJ homolog subfamily C member 27 [Mus musculus]
gi|81900276|sp|Q8CFP6.1|DJC27_MOUSE RecName: Full=DnaJ homolog subfamily C member 27; AltName:
Full=Rab and DnaJ domain-containing protein
gi|27503558|gb|AAH42643.1| DnaJ (Hsp40) homolog, subfamily C, member 27 [Mus musculus]
gi|29835144|gb|AAH51140.1| DnaJ (Hsp40) homolog, subfamily C, member 27 [Mus musculus]
Length = 273
Score = 39.3 bits (90), Expect = 0.31, Method: Composition-based stats.
Identities = 17/38 (44%), Positives = 24/38 (63%)
Query: 10 SIKGTVVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
S++ V+ +GN VGKS +I+RYC F Y TIG+
Sbjct: 14 SLRIKVISMGNAEVGKSCIIKRYCEKRFVSKYLATIGI 51
>gi|413950780|gb|AFW83429.1| ran GTP binding protein [Zea mays]
Length = 221
Score = 39.3 bits (90), Expect = 0.31, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
+VIVG+G GK++ ++R+ G F + Y+ TIGV+
Sbjct: 16 LVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVE 49
>gi|409972275|gb|JAA00341.1| uncharacterized protein, partial [Phleum pratense]
Length = 237
Score = 39.3 bits (90), Expect = 0.31, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
+VIVG+G GK++ ++R+ G F + Y+ TIGV+
Sbjct: 32 LVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVE 65
>gi|344280391|ref|XP_003411967.1| PREDICTED: dnaJ homolog subfamily C member 27-like [Loxodonta
africana]
Length = 273
Score = 39.3 bits (90), Expect = 0.31, Method: Composition-based stats.
Identities = 17/38 (44%), Positives = 24/38 (63%)
Query: 10 SIKGTVVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
S++ V+ +GN VGKS +I+RYC F Y TIG+
Sbjct: 14 SLRIKVISMGNAEVGKSCIIKRYCEKRFVSKYLATIGI 51
>gi|226287961|gb|EEH43474.1| GTP-binding protein ypt3 [Paracoccidioides brasiliensis Pb18]
Length = 210
Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 24/34 (70%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
VV++G+ VGKS+++ R+ R F D K TIGV+
Sbjct: 12 VVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVE 45
>gi|16903082|gb|AAL30396.1|AF433653_1 small Ras-related GTP-binding protein [Triticum aestivum]
gi|19919694|gb|AAM08320.1|AF488730_1 small Ran-related GTP-binding protein [Triticum aestivum]
gi|326492974|dbj|BAJ84948.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|388271208|gb|AFK26593.1| Ran-related GTP-binding protein 1-2 [Triticum aestivum]
gi|388271210|gb|AFK26594.1| Ran-related GTP-binding protein 1-3 [Triticum aestivum]
Length = 221
Score = 39.3 bits (90), Expect = 0.31, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
+VIVG+G GK++ ++R+ G F + Y+ TIGV+
Sbjct: 16 LVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVE 49
>gi|440906094|gb|ELR56399.1| DnaJ-like protein subfamily C member 27 [Bos grunniens mutus]
Length = 273
Score = 39.3 bits (90), Expect = 0.31, Method: Composition-based stats.
Identities = 17/38 (44%), Positives = 24/38 (63%)
Query: 10 SIKGTVVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
S++ V+ +GN VGKS +I+RYC F Y TIG+
Sbjct: 14 SLRVKVISMGNAEVGKSCIIKRYCEKRFVSKYLATIGI 51
>gi|413950779|gb|AFW83428.1| hypothetical protein ZEAMMB73_449857 [Zea mays]
Length = 220
Score = 39.3 bits (90), Expect = 0.31, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
+VIVG+G GK++ ++R+ G F + Y+ TIGV+
Sbjct: 16 LVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVE 49
>gi|357504951|ref|XP_003622764.1| Ras-related protein ARA-1 [Medicago truncatula]
gi|355497779|gb|AES78982.1| Ras-related protein ARA-1 [Medicago truncatula]
Length = 215
Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
+V++G+ AVGKS+++ R+ R F + K TIGV+
Sbjct: 16 IVLIGDSAVGKSNLLSRFARNEFDSNSKATIGVE 49
>gi|222875504|gb|ACM68936.1| Ran-related GTP-binding protein [Festuca arundinacea]
Length = 221
Score = 39.3 bits (90), Expect = 0.31, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
+VIVG+G GK++ ++R+ G F + Y+ TIGV+
Sbjct: 16 LVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVE 49
>gi|409972483|gb|JAA00445.1| uncharacterized protein, partial [Phleum pratense]
Length = 239
Score = 39.3 bits (90), Expect = 0.31, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
+VIVG+G GK++ ++R+ G F + Y+ TIGV+
Sbjct: 34 LVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVE 67
>gi|403356514|gb|EJY77853.1| Small GTPase Rab5c, putative [Oxytricha trifallax]
Length = 205
Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 25/33 (75%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
VV++G+ +VGK+S++QR+ +G F +D TIG
Sbjct: 7 VVLLGDTSVGKTSILQRFAKGQFKKDQDATIGA 39
>gi|449489778|ref|XP_002187627.2| PREDICTED: ras-related protein Rab-11A-like [Taeniopygia guttata]
Length = 232
Score = 39.3 bits (90), Expect = 0.32, Method: Composition-based stats.
Identities = 17/42 (40%), Positives = 27/42 (64%)
Query: 7 LRGSIKGTVVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
LR + VV++G+ VGKS+++ R+ R F + K TIGV+
Sbjct: 22 LRAAAAKAVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVE 63
>gi|301610828|ref|XP_002934952.1| PREDICTED: ras-related protein Rab-32-like [Xenopus (Silurana)
tropicalis]
Length = 164
Score = 39.3 bits (90), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 27/37 (72%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSM 51
V++VG+ VGK+S+IQRY F++ Y+ TIGV ++
Sbjct: 12 VLVVGDLGVGKTSIIQRYVHNVFSQCYRATIGVDFAL 48
>gi|189522743|ref|XP_001340450.2| PREDICTED: ras-related protein Rab-32 [Danio rerio]
Length = 208
Score = 39.3 bits (90), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 25/37 (67%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSM 51
V+++G+ VGKSS ++RY R F + K +IGV SM
Sbjct: 16 VLVIGDHKVGKSSFVKRYVRNQFYEELKTSIGVDFSM 52
>gi|444726512|gb|ELW67042.1| DnaJ like protein subfamily C member 27 [Tupaia chinensis]
Length = 279
Score = 39.3 bits (90), Expect = 0.33, Method: Composition-based stats.
Identities = 17/38 (44%), Positives = 24/38 (63%)
Query: 10 SIKGTVVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
S++ V+ +GN VGKS +I+RYC F Y TIG+
Sbjct: 14 SLRIKVISMGNAEVGKSCIIKRYCEKRFVSKYLATIGI 51
>gi|426223224|ref|XP_004005777.1| PREDICTED: dnaJ homolog subfamily C member 27 isoform 1 [Ovis
aries]
Length = 273
Score = 39.3 bits (90), Expect = 0.33, Method: Composition-based stats.
Identities = 17/38 (44%), Positives = 24/38 (63%)
Query: 10 SIKGTVVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
S++ V+ +GN VGKS +I+RYC F Y TIG+
Sbjct: 14 SLRIKVISMGNAEVGKSCIIKRYCEKRFVSKYLATIGI 51
>gi|410955690|ref|XP_003984484.1| PREDICTED: dnaJ homolog subfamily C member 27 isoform 1 [Felis
catus]
Length = 273
Score = 39.3 bits (90), Expect = 0.33, Method: Composition-based stats.
Identities = 17/38 (44%), Positives = 24/38 (63%)
Query: 10 SIKGTVVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
S++ V+ +GN VGKS +I+RYC F Y TIG+
Sbjct: 14 SLRIKVISMGNAEVGKSCIIKRYCEKRFVSKYLATIGI 51
>gi|405124177|gb|AFR98939.1| septum-promoting GTP-binding protein 1 [Cryptococcus neoformans
var. grubii H99]
Length = 232
Score = 39.3 bits (90), Expect = 0.33, Method: Composition-based stats.
Identities = 17/40 (42%), Positives = 27/40 (67%)
Query: 8 RGSIKGTVVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
R SI V +VG+ +GK+S++ +Y G+F DY +T+GV
Sbjct: 24 RNSIVLKVGMVGDSQIGKTSLMVKYVEGSFDEDYIQTLGV 63
>gi|388494812|gb|AFK35472.1| unknown [Medicago truncatula]
Length = 215
Score = 39.3 bits (90), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
+V++G+ AVGKS+++ R+ R F + K TIGV+
Sbjct: 16 IVLIGDSAVGKSNLLSRFARNEFDSNSKATIGVE 49
>gi|308451532|ref|XP_003088707.1| hypothetical protein CRE_26006 [Caenorhabditis remanei]
gi|308246050|gb|EFO90002.1| hypothetical protein CRE_26006 [Caenorhabditis remanei]
Length = 260
Score = 39.3 bits (90), Expect = 0.33, Method: Composition-based stats.
Identities = 14/33 (42%), Positives = 26/33 (78%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
+V+VG+GA GK+S+ QR+ + +F + Y +T+G+
Sbjct: 38 IVVVGDGASGKTSICQRFAKESFDKSYHQTLGL 70
>gi|301756036|ref|XP_002913836.1| PREDICTED: dnaJ homolog subfamily C member 27-like [Ailuropoda
melanoleuca]
Length = 273
Score = 39.3 bits (90), Expect = 0.33, Method: Composition-based stats.
Identities = 17/38 (44%), Positives = 24/38 (63%)
Query: 10 SIKGTVVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
S++ V+ +GN VGKS +I+RYC F Y TIG+
Sbjct: 14 SLRIKVISMGNAEVGKSCIIKRYCEKRFVSKYLATIGI 51
>gi|218201483|gb|EEC83910.1| hypothetical protein OsI_29960 [Oryza sativa Indica Group]
Length = 407
Score = 39.3 bits (90), Expect = 0.33, Method: Composition-based stats.
Identities = 18/34 (52%), Positives = 24/34 (70%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
VVI+G+ AVGKS+++ RY R F K TIGV+
Sbjct: 16 VVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVE 49
>gi|149050852|gb|EDM03025.1| RBJ protein [Rattus norvegicus]
Length = 272
Score = 39.3 bits (90), Expect = 0.33, Method: Composition-based stats.
Identities = 17/38 (44%), Positives = 24/38 (63%)
Query: 10 SIKGTVVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
S++ V+ +GN VGKS +I+RYC F Y TIG+
Sbjct: 14 SLRIKVISMGNAEVGKSCIIKRYCEKRFVSKYLATIGI 51
>gi|413946628|gb|AFW79277.1| hypothetical protein ZEAMMB73_453609 [Zea mays]
Length = 228
Score = 39.3 bits (90), Expect = 0.33, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
+VIVG+G GK++ ++R+ G F + Y+ TIGV+
Sbjct: 23 LVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVE 56
>gi|354469287|ref|XP_003497061.1| PREDICTED: dnaJ homolog subfamily C member 27-like [Cricetulus
griseus]
gi|344239728|gb|EGV95831.1| DnaJ-like subfamily C member 27 [Cricetulus griseus]
Length = 273
Score = 39.3 bits (90), Expect = 0.33, Method: Composition-based stats.
Identities = 17/38 (44%), Positives = 24/38 (63%)
Query: 10 SIKGTVVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
S++ V+ +GN VGKS +I+RYC F Y TIG+
Sbjct: 14 SLRIKVISMGNAEVGKSCIIKRYCEKRFVSKYLATIGI 51
>gi|71896105|ref|NP_001025601.1| RAB28, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|60688519|gb|AAH91050.1| RAB28, member RAS oncogene family [Xenopus (Silurana) tropicalis]
Length = 221
Score = 39.3 bits (90), Expect = 0.33, Method: Composition-based stats.
Identities = 14/33 (42%), Positives = 26/33 (78%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
+VI+G+GA GK+S+ R+ + +F + YK+T+G+
Sbjct: 15 IVILGDGACGKTSLAMRFAQESFGKQYKQTVGI 47
>gi|50302629|ref|XP_451250.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49640381|emb|CAH02838.1| KLLA0A05643p [Kluyveromyces lactis]
Length = 218
Score = 39.3 bits (90), Expect = 0.33, Method: Composition-based stats.
Identities = 16/31 (51%), Positives = 23/31 (74%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTI 45
+V+VG+GAVGK+S++ Y +G F DY TI
Sbjct: 34 IVVVGDGAVGKTSLLISYTQGKFPEDYVPTI 64
>gi|57098485|ref|XP_540109.1| PREDICTED: dnaJ homolog subfamily C member 27 isoform 1 [Canis
lupus familiaris]
Length = 273
Score = 39.3 bits (90), Expect = 0.33, Method: Composition-based stats.
Identities = 17/38 (44%), Positives = 24/38 (63%)
Query: 10 SIKGTVVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
S++ V+ +GN VGKS +I+RYC F Y TIG+
Sbjct: 14 SLRIKVISMGNAEVGKSCIIKRYCEKRFVSKYLATIGI 51
>gi|407701364|ref|YP_006826151.1| small GTP-binding protein [Alteromonas macleodii str. 'Black Sea
11']
gi|407250511|gb|AFT79696.1| small GTP-binding protein [Alteromonas macleodii str. 'Black Sea
11']
Length = 161
Score = 39.3 bits (90), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 26/38 (68%)
Query: 11 IKGTVVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
I+ V I+G VGK+S+I+++ G F+ YK TIGVK
Sbjct: 2 IQKKVCILGPTGVGKTSLIKQFVEGIFSEKYKTTIGVK 39
>gi|308477986|ref|XP_003101205.1| CRE-RAB-28 protein [Caenorhabditis remanei]
gi|308263910|gb|EFP07863.1| CRE-RAB-28 protein [Caenorhabditis remanei]
Length = 267
Score = 39.3 bits (90), Expect = 0.33, Method: Composition-based stats.
Identities = 14/33 (42%), Positives = 26/33 (78%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
+V+VG+GA GK+S+ QR+ + +F + Y +T+G+
Sbjct: 38 IVVVGDGASGKTSICQRFAKESFDKSYHQTLGL 70
>gi|116784406|gb|ABK23331.1| unknown [Picea sitchensis]
Length = 222
Score = 39.3 bits (90), Expect = 0.33, Method: Composition-based stats.
Identities = 16/34 (47%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
VV++G+ AVGKS ++ R+ + F+ D K TIGV+
Sbjct: 18 VVVIGDSAVGKSQILSRFAKNEFSLDSKSTIGVE 51
>gi|164427985|ref|XP_956972.2| GTP-binding protein ypt3 [Neurospora crassa OR74A]
gi|18376163|emb|CAD21237.1| probable GTP-binding protein Drab11 [Neurospora crassa]
gi|157071962|gb|EAA27736.2| GTP-binding protein ypt3 [Neurospora crassa OR74A]
gi|336468176|gb|EGO56339.1| hypothetical protein NEUTE1DRAFT_130332 [Neurospora tetrasperma
FGSC 2508]
gi|350289578|gb|EGZ70803.1| putative GTP-binding protein Drab11 [Neurospora tetrasperma FGSC
2509]
Length = 214
Score = 39.3 bits (90), Expect = 0.33, Method: Composition-based stats.
Identities = 16/34 (47%), Positives = 24/34 (70%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
VV++G+ VGKS+++ R+ R F D K TIGV+
Sbjct: 12 VVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVE 45
>gi|431911890|gb|ELK14034.1| DnaJ like protein subfamily C member 27 [Pteropus alecto]
Length = 273
Score = 39.3 bits (90), Expect = 0.33, Method: Composition-based stats.
Identities = 17/38 (44%), Positives = 24/38 (63%)
Query: 10 SIKGTVVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
S++ V+ +GN VGKS +I+RYC F Y TIG+
Sbjct: 14 SLRIKVISMGNAEVGKSCIIKRYCEKRFVSKYLATIGI 51
>gi|413950781|gb|AFW83430.1| ran GTP binding protein [Zea mays]
Length = 233
Score = 39.3 bits (90), Expect = 0.33, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
+VIVG+G GK++ ++R+ G F + Y+ TIGV+
Sbjct: 28 LVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVE 61
>gi|402578983|gb|EJW72936.1| hypothetical protein WUBG_16155 [Wuchereria bancrofti]
Length = 100
Score = 39.3 bits (90), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 24/31 (77%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTI 45
+V++G G VGK+S+I+RY GTF Y++T+
Sbjct: 8 IVVLGPGKVGKTSIIRRYLHGTFDEKYRETV 38
>gi|212722150|ref|NP_001131881.1| uncharacterized protein LOC100193260 [Zea mays]
gi|242091447|ref|XP_002441556.1| hypothetical protein SORBIDRAFT_09g029250 [Sorghum bicolor]
gi|194708406|gb|ACF88287.1| unknown [Zea mays]
gi|195616826|gb|ACG30243.1| GTP-binding nuclear protein Ran-A1 [Zea mays]
gi|241946841|gb|EES19986.1| hypothetical protein SORBIDRAFT_09g029250 [Sorghum bicolor]
gi|413946630|gb|AFW79279.1| GTP-binding nuclear protein Ran-A1 [Zea mays]
Length = 221
Score = 39.3 bits (90), Expect = 0.33, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
+VIVG+G GK++ ++R+ G F + Y+ TIGV+
Sbjct: 16 LVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVE 49
>gi|116789126|gb|ABK25126.1| unknown [Picea sitchensis]
Length = 224
Score = 39.3 bits (90), Expect = 0.33, Method: Composition-based stats.
Identities = 16/34 (47%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
+V++G+ AVGKS ++ R+ R F+ D K TIGV+
Sbjct: 18 IVLIGDSAVGKSQLLARFARNEFSLDSKATIGVE 51
>gi|3024503|sp|Q40520.1|RB11C_TOBAC RecName: Full=Ras-related protein Rab11C
gi|623576|gb|AAA74112.1| putative [Nicotiana tabacum]
Length = 222
Score = 39.3 bits (90), Expect = 0.34, Method: Composition-based stats.
Identities = 16/34 (47%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
VV++G+ AVGK+ ++ R+ R F+ D K TIGV+
Sbjct: 18 VVLIGDSAVGKTQILARFARNEFSLDSKATIGVE 51
>gi|290979280|ref|XP_002672362.1| rho GTPase [Naegleria gruberi]
gi|284085938|gb|EFC39618.1| rho GTPase [Naegleria gruberi]
Length = 461
Score = 39.3 bits (90), Expect = 0.34, Method: Composition-based stats.
Identities = 18/52 (34%), Positives = 32/52 (61%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSMIQRYCRGTFTRDYKK 66
VV VG+GAVGK+++++RY G + DY T+ ++ + T++ DY +
Sbjct: 279 VVAVGDGAVGKTTLLKRYSSGDYPNDYIPTVFDNHNISVKVEDKTYSIDYDR 330
>gi|300116225|ref|NP_996727.2| dnaJ homolog subfamily C member 27 [Rattus norvegicus]
gi|81872305|sp|Q6IML7.1|DJC27_RAT RecName: Full=DnaJ homolog subfamily C member 27; AltName:
Full=Rab and DnaJ domain-containing protein
gi|42491752|tpg|DAA01325.1| TPA_exp: RBJ protein [Rattus norvegicus]
Length = 273
Score = 39.3 bits (90), Expect = 0.34, Method: Composition-based stats.
Identities = 17/38 (44%), Positives = 24/38 (63%)
Query: 10 SIKGTVVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
S++ V+ +GN VGKS +I+RYC F Y TIG+
Sbjct: 14 SLRIKVISMGNAEVGKSCIIKRYCEKRFVSKYLATIGI 51
>gi|332142771|ref|YP_004428509.1| small GTP-binding protein [Alteromonas macleodii str. 'Deep
ecotype']
gi|332142806|ref|YP_004428544.1| small GTP-binding protein [Alteromonas macleodii str. 'Deep
ecotype']
gi|410863009|ref|YP_006978243.1| small GTP-binding protein [Alteromonas macleodii AltDE1]
gi|327552793|gb|AEA99511.1| small GTP-binding protein [Alteromonas macleodii str. 'Deep
ecotype']
gi|327552828|gb|AEA99546.1| small GTP-binding protein [Alteromonas macleodii str. 'Deep
ecotype']
gi|410820271|gb|AFV86888.1| small GTP-binding protein [Alteromonas macleodii AltDE1]
Length = 161
Score = 39.3 bits (90), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 26/38 (68%)
Query: 11 IKGTVVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
I+ V I+G VGK+S+I+++ G F+ YK TIGVK
Sbjct: 2 IQKKVCILGPTGVGKTSLIKQFVEGIFSEKYKTTIGVK 39
>gi|348675957|gb|EGZ15775.1| hypothetical protein PHYSODRAFT_561505 [Phytophthora sojae]
Length = 218
Score = 38.9 bits (89), Expect = 0.34, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 29/48 (60%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSMIQRYCRGTFTR 62
V+++G+ A GK+S+I+RY F+ ++ TIGV ++ GT R
Sbjct: 16 VLVLGDAATGKTSIIKRYVHDAFSEHHRTTIGVDFALKAVTVNGTTVR 63
>gi|346320690|gb|EGX90290.1| Ras GTPase Rab11, putative [Cordyceps militaris CM01]
Length = 204
Score = 38.9 bits (89), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 24/36 (66%)
Query: 13 GTVVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
G V++G+ VGKS+++ R+ R F D K TIGV+
Sbjct: 2 GLFVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVE 37
>gi|406598097|ref|YP_006749227.1| small GTP-binding protein [Alteromonas macleodii ATCC 27126]
gi|406375418|gb|AFS38673.1| small GTP-binding protein [Alteromonas macleodii ATCC 27126]
Length = 161
Score = 38.9 bits (89), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 26/38 (68%)
Query: 11 IKGTVVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
I+ V I+G VGK+S+I+++ G F+ YK TIGVK
Sbjct: 2 IQKKVCILGPTGVGKTSLIKQFVEGIFSEKYKTTIGVK 39
>gi|443726396|gb|ELU13576.1| hypothetical protein CAPTEDRAFT_146879 [Capitella teleta]
Length = 264
Score = 38.9 bits (89), Expect = 0.34, Method: Composition-based stats.
Identities = 17/40 (42%), Positives = 25/40 (62%)
Query: 8 RGSIKGTVVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
+ SI+ ++ +GN VGKS +I+RYC F Y TIG+
Sbjct: 5 KQSIRIKIISMGNTEVGKSCIIKRYCEKRFVHKYLATIGI 44
>gi|50556440|ref|XP_505628.1| YALI0F19602p [Yarrowia lipolytica]
gi|49651498|emb|CAG78437.1| YALI0F19602p [Yarrowia lipolytica CLIB122]
Length = 205
Score = 38.9 bits (89), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 23/33 (69%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
VVI+G+ VGKSS++Q+Y F+ YK TIG
Sbjct: 11 VVILGDSGVGKSSLMQQYVNNKFSTQYKATIGA 43
>gi|268531116|ref|XP_002630684.1| C. briggsae CBR-DRN-1 protein [Caenorhabditis briggsae]
Length = 225
Score = 38.9 bits (89), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 22/31 (70%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTI 45
V + G G VGKSS++QR+ +GTF +Y TI
Sbjct: 39 VAVFGAGGVGKSSIVQRFVKGTFNENYVPTI 69
>gi|414873861|tpg|DAA52418.1| TPA: hypothetical protein ZEAMMB73_441203 [Zea mays]
Length = 234
Score = 38.9 bits (89), Expect = 0.34, Method: Composition-based stats.
Identities = 17/34 (50%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
VV+VG+ VGKS+++ R+ R F+ D K TIGV+
Sbjct: 22 VVLVGDSGVGKSNLLSRFTRNAFSLDSKSTIGVE 55
>gi|410927462|ref|XP_003977165.1| PREDICTED: ras-related protein Rab-25-like [Takifugu rubripes]
Length = 208
Score = 38.9 bits (89), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 24/36 (66%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSS 50
VV++G VGKS+++ RY + F D + TIGV+ S
Sbjct: 13 VVLIGESGVGKSNLLSRYTKNEFNHDSRTTIGVEFS 48
>gi|359806412|ref|NP_001240985.1| ras-related protein RABA5b-like [Glycine max]
gi|345651732|gb|AEO14876.1| rfls8 protein [Glycine max]
Length = 213
Score = 38.9 bits (89), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
+V++G+ AVGKS+++ R+ R F + K TIGV+
Sbjct: 15 IVLIGDSAVGKSNLLSRFARNEFDSNSKATIGVE 48
>gi|320164592|gb|EFW41491.1| ran-1-like protein [Capsaspora owczarzaki ATCC 30864]
Length = 215
Score = 38.9 bits (89), Expect = 0.34, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
+V+VG+G+ GK++ ++R+ G F R Y TIGV+
Sbjct: 11 LVLVGDGSTGKTTFVKRHISGEFERKYVATIGVE 44
>gi|154277098|ref|XP_001539394.1| Rab1a [Ajellomyces capsulatus NAm1]
gi|150414467|gb|EDN09832.1| Rab1a [Ajellomyces capsulatus NAm1]
gi|225554603|gb|EEH02899.1| GTP-binding protein ypt3 [Ajellomyces capsulatus G186AR]
gi|240276947|gb|EER40457.1| GTP-binding protein [Ajellomyces capsulatus H143]
gi|325094881|gb|EGC48191.1| GTP-binding protein ypt3 [Ajellomyces capsulatus H88]
Length = 210
Score = 38.9 bits (89), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 24/34 (70%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
VV++G+ VGKS+++ R+ R F D K TIGV+
Sbjct: 12 VVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVE 45
>gi|407685121|ref|YP_006800295.1| small GTP-binding protein [Alteromonas macleodii str. 'English
Channel 673']
gi|407246732|gb|AFT75918.1| small GTP-binding protein [Alteromonas macleodii str. 'English
Channel 673']
Length = 161
Score = 38.9 bits (89), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 26/38 (68%)
Query: 11 IKGTVVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
I+ V I+G VGK+S+I+++ G F+ YK TIGVK
Sbjct: 2 IQKKVCILGPTGVGKTSLIKQFVEGIFSEKYKTTIGVK 39
>gi|332375042|gb|AEE62662.1| unknown [Dendroctonus ponderosae]
Length = 203
Score = 38.9 bits (89), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 23/33 (69%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
V+I+G+ VGK+++ RYC G FT + TIGV
Sbjct: 15 VIIIGDSNVGKTTLTYRYCEGAFTDKPEATIGV 47
>gi|302781422|ref|XP_002972485.1| rab family GTPase [Selaginella moellendorffii]
gi|300159952|gb|EFJ26571.1| rab family GTPase [Selaginella moellendorffii]
Length = 214
Score = 38.9 bits (89), Expect = 0.35, Method: Composition-based stats.
Identities = 17/34 (50%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
VV++G+ AVGKS ++ R+ R FT + K TIGV+
Sbjct: 17 VVLIGDSAVGKSQLLARFSRNEFTLESKATIGVE 50
>gi|302805127|ref|XP_002984315.1| rab family GTPase [Selaginella moellendorffii]
gi|300148164|gb|EFJ14825.1| rab family GTPase [Selaginella moellendorffii]
Length = 214
Score = 38.9 bits (89), Expect = 0.35, Method: Composition-based stats.
Identities = 17/34 (50%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
VV++G+ AVGKS ++ R+ R FT + K TIGV+
Sbjct: 17 VVLIGDSAVGKSQLLARFSRNEFTLESKATIGVE 50
>gi|306922402|ref|NP_001182452.1| dnaJ homolog subfamily C member 27 [Equus caballus]
Length = 273
Score = 38.9 bits (89), Expect = 0.35, Method: Composition-based stats.
Identities = 17/38 (44%), Positives = 24/38 (63%)
Query: 10 SIKGTVVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
S++ V+ +GN VGKS +I+RYC F Y TIG+
Sbjct: 14 SLRIKVISMGNAEVGKSCIIKRYCEKRFVSKYLATIGI 51
>gi|328767615|gb|EGF77664.1| hypothetical protein BATDEDRAFT_27541 [Batrachochytrium
dendrobatidis JAM81]
Length = 200
Score = 38.9 bits (89), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 23/34 (67%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
VV+VG+ GKS+++QRY TF+ DY +T G
Sbjct: 14 VVVVGSAGCGKSALVQRYINNTFSTDYLQTYGAD 47
>gi|223941192|dbj|BAH23088.1| small GTP binding protein Rab11 [Babesia bigemina]
Length = 211
Score = 38.9 bits (89), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
+V++G+ VGKS+++ R+ +G F D K TIGV+
Sbjct: 13 IVLIGDSNVGKSNLLDRFVKGNFKLDSKSTIGVE 46
>gi|195012268|ref|XP_001983558.1| GH15514 [Drosophila grimshawi]
gi|193897040|gb|EDV95906.1| GH15514 [Drosophila grimshawi]
Length = 277
Score = 38.9 bits (89), Expect = 0.35, Method: Composition-based stats.
Identities = 16/33 (48%), Positives = 24/33 (72%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
V+ VG+ AVGK++++ R+C F +YK TIGV
Sbjct: 67 VIFVGDCAVGKTAIVNRFCFDKFQCNYKATIGV 99
>gi|109940137|sp|P25766.2|RGP1_ORYSJ RecName: Full=Ras-related protein RGP1; AltName: Full=GTP-binding
regulatory protein RGP1
gi|50251643|dbj|BAD29646.1| putative ras-related GTP-binding protein [Oryza sativa Japonica
Group]
gi|222641214|gb|EEE69346.1| hypothetical protein OsJ_28668 [Oryza sativa Japonica Group]
Length = 226
Score = 38.9 bits (89), Expect = 0.35, Method: Composition-based stats.
Identities = 17/34 (50%), Positives = 24/34 (70%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
VV++G+ AVGKS ++ R+ R F D K TIGV+
Sbjct: 21 VVLIGDSAVGKSQLLARFARNEFNLDSKATIGVE 54
>gi|242044174|ref|XP_002459958.1| hypothetical protein SORBIDRAFT_02g018890 [Sorghum bicolor]
gi|241923335|gb|EER96479.1| hypothetical protein SORBIDRAFT_02g018890 [Sorghum bicolor]
Length = 226
Score = 38.9 bits (89), Expect = 0.35, Method: Composition-based stats.
Identities = 17/34 (50%), Positives = 24/34 (70%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
VV++G+ AVGKS ++ R+ R F D K TIGV+
Sbjct: 20 VVLIGDSAVGKSQLLARFARNEFNLDSKATIGVE 53
>gi|357132454|ref|XP_003567845.1| PREDICTED: GTP-binding nuclear protein Ran-3-like [Brachypodium
distachyon]
Length = 221
Score = 38.9 bits (89), Expect = 0.36, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
+VIVG+G GK++ ++R+ G F + Y+ TIGV+
Sbjct: 16 LVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVE 49
>gi|261194555|ref|XP_002623682.1| Rab1a [Ajellomyces dermatitidis SLH14081]
gi|239588220|gb|EEQ70863.1| Rab1a [Ajellomyces dermatitidis SLH14081]
gi|239613500|gb|EEQ90487.1| Rab1a [Ajellomyces dermatitidis ER-3]
Length = 210
Score = 38.9 bits (89), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 24/34 (70%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
VV++G+ VGKS+++ R+ R F D K TIGV+
Sbjct: 12 VVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVE 45
>gi|222640895|gb|EEE69027.1| hypothetical protein OsJ_28001 [Oryza sativa Japonica Group]
Length = 407
Score = 38.9 bits (89), Expect = 0.36, Method: Composition-based stats.
Identities = 18/34 (52%), Positives = 24/34 (70%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
VVI+G+ AVGKS+++ RY R F K TIGV+
Sbjct: 16 VVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVE 49
>gi|225450193|ref|XP_002264293.1| PREDICTED: ras-related protein RGP1 [Vitis vinifera]
gi|297736218|emb|CBI24856.3| unnamed protein product [Vitis vinifera]
Length = 226
Score = 38.9 bits (89), Expect = 0.36, Method: Composition-based stats.
Identities = 17/34 (50%), Positives = 24/34 (70%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
VV++G+ AVGKS ++ R+ R F D K TIGV+
Sbjct: 19 VVLIGDSAVGKSQLLARFARNEFNLDSKATIGVE 52
>gi|440791733|gb|ELR12971.1| GTPbinding nuclear protein Ran, putative [Acanthamoeba
castellanii str. Neff]
Length = 221
Score = 38.9 bits (89), Expect = 0.36, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
VV++G+G GK+++++R+ G F R Y T+GV+
Sbjct: 12 VVLIGDGGTGKTTLVKRHMSGEFERKYVPTLGVE 45
>gi|147906009|ref|NP_001091578.1| dnaJ homolog subfamily C member 27 [Bos taurus]
gi|189029390|sp|A5D7F5.1|DJC27_BOVIN RecName: Full=DnaJ homolog subfamily C member 27; AltName:
Full=Rab and DnaJ domain-containing protein
gi|146186527|gb|AAI40537.1| DNAJC27 protein [Bos taurus]
gi|296482307|tpg|DAA24422.1| TPA: dnaJ homolog subfamily C member 27 [Bos taurus]
Length = 273
Score = 38.9 bits (89), Expect = 0.36, Method: Composition-based stats.
Identities = 17/38 (44%), Positives = 24/38 (63%)
Query: 10 SIKGTVVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
S++ V+ +GN VGKS +I+RYC F Y TIG+
Sbjct: 14 SLRIKVISMGNAEVGKSCIIKRYCEKRFVSKYLATIGI 51
>gi|395828664|ref|XP_003787487.1| PREDICTED: dnaJ homolog subfamily C member 27 isoform 1 [Otolemur
garnettii]
Length = 272
Score = 38.9 bits (89), Expect = 0.36, Method: Composition-based stats.
Identities = 17/38 (44%), Positives = 24/38 (63%)
Query: 10 SIKGTVVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
S++ V+ +GN VGKS +I+RYC F Y TIG+
Sbjct: 14 SLRIKVISMGNAEVGKSCIIKRYCEKRFVSKYLATIGI 51
>gi|350582651|ref|XP_003481325.1| PREDICTED: dnaJ homolog subfamily C member 27-like isoform 1 [Sus
scrofa]
Length = 281
Score = 38.9 bits (89), Expect = 0.36, Method: Composition-based stats.
Identities = 17/38 (44%), Positives = 24/38 (63%)
Query: 10 SIKGTVVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
S++ V+ +GN VGKS +I+RYC F Y TIG+
Sbjct: 14 SLRIKVISMGNAEVGKSCIIKRYCEKRFVSKYLATIGI 51
>gi|403221558|dbj|BAM39691.1| small GTPase [Theileria orientalis strain Shintoku]
Length = 212
Score = 38.9 bits (89), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
+V++G+ VGKS+++ R+ +G F D K TIGV+
Sbjct: 13 IVLIGDSNVGKSNLLDRFVKGNFKLDSKSTIGVE 46
>gi|336261533|ref|XP_003345554.1| hypothetical protein SMAC_06207 [Sordaria macrospora k-hell]
gi|380094775|emb|CCC07276.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 214
Score = 38.9 bits (89), Expect = 0.36, Method: Composition-based stats.
Identities = 16/34 (47%), Positives = 24/34 (70%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
VV++G+ VGKS+++ R+ R F D K TIGV+
Sbjct: 12 VVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVE 45
>gi|291387182|ref|XP_002710121.1| PREDICTED: DnaJ (Hsp40) homolog, subfamily C, member 27
[Oryctolagus cuniculus]
Length = 273
Score = 38.9 bits (89), Expect = 0.37, Method: Composition-based stats.
Identities = 17/38 (44%), Positives = 24/38 (63%)
Query: 10 SIKGTVVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
S++ V+ +GN VGKS +I+RYC F Y TIG+
Sbjct: 14 SLRIKVISMGNAEVGKSCIIKRYCEKRFVSKYLATIGI 51
>gi|148237858|ref|NP_001091380.1| uncharacterized protein LOC100037231 [Xenopus laevis]
gi|125858912|gb|AAI29780.1| LOC100037231 protein [Xenopus laevis]
Length = 209
Score = 38.9 bits (89), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 27/37 (72%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSM 51
V++VG+ VGK+S+IQRY F++ Y+ TIGV ++
Sbjct: 12 VLVVGDLGVGKTSIIQRYVHNVFSQCYRATIGVDFAL 48
>gi|353239723|emb|CCA71622.1| probable GTP-binding protein Rab11 [Piriformospora indica DSM
11827]
Length = 268
Score = 38.9 bits (89), Expect = 0.37, Method: Composition-based stats.
Identities = 16/34 (47%), Positives = 24/34 (70%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
VV++G+ VGKS+++ R+ R F D K TIGV+
Sbjct: 13 VVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVE 46
>gi|237841215|ref|XP_002369905.1| Rab 11b, putative [Toxoplasma gondii ME49]
gi|31747346|gb|AAP57534.1| Rab11b [Toxoplasma gondii]
gi|211967569|gb|EEB02765.1| Rab 11b, putative [Toxoplasma gondii ME49]
gi|221483581|gb|EEE21893.1| rab11, putative [Toxoplasma gondii GT1]
gi|221504390|gb|EEE30065.1| RAB-18, putative [Toxoplasma gondii VEG]
Length = 226
Score = 38.9 bits (89), Expect = 0.37, Method: Composition-based stats.
Identities = 16/34 (47%), Positives = 24/34 (70%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
V++VG+ VGK+ ++ RY RGT + K TIGV+
Sbjct: 14 VILVGDATVGKTHLLSRYIRGTLPKSPKATIGVE 47
>gi|406602416|emb|CCH46032.1| hypothetical protein BN7_5619 [Wickerhamomyces ciferrii]
Length = 205
Score = 38.9 bits (89), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 24/33 (72%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
V+I+G+ VGK+S++Q++ G F+ YK TIG
Sbjct: 11 VIILGDSGVGKTSLMQQFVNGKFSNQYKATIGA 43
>gi|330038778|ref|XP_003239698.1| GTP-binding nuclear protein RAN [Cryptomonas paramecium]
gi|327206622|gb|AEA38800.1| GTP-binding nuclear protein RAN [Cryptomonas paramecium]
Length = 218
Score = 38.9 bits (89), Expect = 0.37, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSMIQRYC-RGTFTRDYKKTIG 69
+++VG+G VGK++ ++R+ G F + Y TIGV+ ++ Y RG + T G
Sbjct: 16 LILVGDGGVGKTTFVKRHLTGEFEKKYIATIGVEVHPLKFYTNRGVLIFNIWDTAG 71
>gi|170589537|ref|XP_001899530.1| Ras family protein [Brugia malayi]
gi|158593743|gb|EDP32338.1| Ras family protein [Brugia malayi]
Length = 243
Score = 38.9 bits (89), Expect = 0.37, Method: Composition-based stats.
Identities = 15/31 (48%), Positives = 24/31 (77%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTI 45
+V++G G VGK+S+I+RY GTF Y++T+
Sbjct: 8 IVVLGPGKVGKTSIIRRYLHGTFDEKYRETV 38
>gi|14486426|gb|AAK62027.1| Rab-related GTP-binding protein [Mus musculus]
gi|42475932|tpg|DAA01324.1| TPA_exp: RBJ protein [Mus musculus]
Length = 274
Score = 38.9 bits (89), Expect = 0.37, Method: Composition-based stats.
Identities = 17/38 (44%), Positives = 24/38 (63%)
Query: 10 SIKGTVVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
S++ V+ +GN VGKS +I+RYC F Y TIG+
Sbjct: 14 SLRIKVISMGNAEVGKSCIIERYCEKRFVFKYLATIGI 51
>gi|301122745|ref|XP_002909099.1| Rab32 family GTPase, putative [Phytophthora infestans T30-4]
gi|262099861|gb|EEY57913.1| Rab32 family GTPase, putative [Phytophthora infestans T30-4]
Length = 218
Score = 38.9 bits (89), Expect = 0.38, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 29/48 (60%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSMIQRYCRGTFTR 62
V+++G+ A GK+S+I+RY F+ ++ TIGV ++ GT R
Sbjct: 16 VLVLGDAATGKTSIIKRYVHDAFSEHHRTTIGVDFALKAVTVSGTTVR 63
>gi|224284718|gb|ACN40090.1| unknown [Picea sitchensis]
Length = 221
Score = 38.9 bits (89), Expect = 0.38, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
+VIVG+G GK++ ++R+ G F + Y+ TIGV+
Sbjct: 15 LVIVGDGGTGKTTFVKRHLTGEFEKRYEPTIGVE 48
>gi|168016376|ref|XP_001760725.1| ran-family small GTPase [Physcomitrella patens subsp. patens]
gi|162688085|gb|EDQ74464.1| ran-family small GTPase [Physcomitrella patens subsp. patens]
Length = 223
Score = 38.9 bits (89), Expect = 0.38, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
+VIVG+G GK++ ++R+ G F + Y+ TIGV+
Sbjct: 17 LVIVGDGGTGKTTFVKRHLTGEFEKRYEPTIGVE 50
>gi|390358358|ref|XP_789541.3| PREDICTED: ras-related protein Rab-28-like [Strongylocentrotus
purpuratus]
Length = 224
Score = 38.9 bits (89), Expect = 0.38, Method: Composition-based stats.
Identities = 16/42 (38%), Positives = 29/42 (69%), Gaps = 1/42 (2%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSMIQRYC 56
+V+VG+GA GK+S+ RY + F + Y++T+G+ ++R C
Sbjct: 17 IVVVGDGASGKTSLATRYSQEQFGKQYQQTVGL-DFFLKRIC 57
>gi|327357374|gb|EGE86231.1| Rab1a [Ajellomyces dermatitidis ATCC 18188]
Length = 209
Score = 38.9 bits (89), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 24/34 (70%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
VV++G+ VGKS+++ R+ R F D K TIGV+
Sbjct: 11 VVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVE 44
>gi|71034167|ref|XP_766725.1| hypothetical protein [Theileria parva strain Muguga]
gi|68353682|gb|EAN34442.1| GTP-binding protein rab11, putative [Theileria parva]
gi|110825814|gb|ABH00983.1| small GTP-binding protein [Theileria parva]
Length = 212
Score = 38.9 bits (89), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
+V++G+ VGKS+++ R+ +G F D K TIGV+
Sbjct: 13 IVLIGDSNVGKSNLLDRFVKGNFKLDSKSTIGVE 46
>gi|289370|gb|AAA68983.1| small GTP-binding protein [Brassica napus]
Length = 219
Score = 38.9 bits (89), Expect = 0.39, Method: Composition-based stats.
Identities = 17/34 (50%), Positives = 24/34 (70%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
+VI+G+ AVGKS+++ RY R F K TIGV+
Sbjct: 15 IVIIGDSAVGKSNLLSRYARNEFNAHSKATIGVE 48
>gi|429965619|gb|ELA47616.1| small GTP-binding protein domain protein [Vavraia culicis
'floridensis']
Length = 199
Score = 38.9 bits (89), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 24/32 (75%)
Query: 16 VIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
+++GN VGK+S+I RY T+T++Y TIGV
Sbjct: 11 ILIGNSGVGKTSIINRYVDETYTKNYISTIGV 42
>gi|365764429|gb|EHN05952.1| Rho4p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 291
Score = 38.9 bits (89), Expect = 0.39, Method: Composition-based stats.
Identities = 16/31 (51%), Positives = 23/31 (74%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTI 45
+V+VG+GAVGK+ ++ Y +GTF DY TI
Sbjct: 75 IVVVGDGAVGKTCLLISYVQGTFPTDYIXTI 105
>gi|401399414|ref|XP_003880543.1| putative Rab 11b [Neospora caninum Liverpool]
gi|325114954|emb|CBZ50510.1| putative Rab 11b [Neospora caninum Liverpool]
Length = 272
Score = 38.9 bits (89), Expect = 0.39, Method: Composition-based stats.
Identities = 16/34 (47%), Positives = 24/34 (70%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
V++VG+ VGK+ ++ RY RGT + K TIGV+
Sbjct: 15 VILVGDATVGKTHLLSRYIRGTLPKSPKATIGVE 48
>gi|260812870|ref|XP_002601143.1| hypothetical protein BRAFLDRAFT_279031 [Branchiostoma floridae]
gi|229286434|gb|EEN57155.1| hypothetical protein BRAFLDRAFT_279031 [Branchiostoma floridae]
Length = 224
Score = 38.9 bits (89), Expect = 0.39, Method: Composition-based stats.
Identities = 15/33 (45%), Positives = 25/33 (75%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
+VI+G+GA GK+S+ RY + F + YK+T+G+
Sbjct: 15 IVIMGDGASGKTSLAVRYSQENFGKQYKQTVGL 47
>gi|156086346|ref|XP_001610582.1| ras-related protein Rab11A [Babesia bovis T2Bo]
gi|154797835|gb|EDO07014.1| ras-related protein Rab11A [Babesia bovis]
Length = 212
Score = 38.9 bits (89), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
+V++G+ VGKS+++ R+ +G F D K TIGV+
Sbjct: 13 IVLIGDSNVGKSNLLDRFVKGNFKLDSKSTIGVE 46
>gi|440295991|gb|ELP88837.1| GTP-binding protein yptV1, putative [Entamoeba invadens IP1]
Length = 198
Score = 38.9 bits (89), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 26/33 (78%)
Query: 17 IVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKS 49
++G+ VGK++++QR+C GT+ +Y TIG+++
Sbjct: 9 LIGDVGVGKTALLQRFCFGTYIDEYDATIGIET 41
>gi|260827853|ref|XP_002608878.1| hypothetical protein BRAFLDRAFT_129938 [Branchiostoma floridae]
gi|229294232|gb|EEN64888.1| hypothetical protein BRAFLDRAFT_129938 [Branchiostoma floridae]
Length = 612
Score = 38.9 bits (89), Expect = 0.39, Method: Composition-based stats.
Identities = 14/37 (37%), Positives = 25/37 (67%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSM 51
+++VG+ VGK+S I R+C+ TF+ + T+G+ M
Sbjct: 391 IILVGDSGVGKTSFIHRFCKNTFSPKRQVTVGIGYYM 427
>gi|414873860|tpg|DAA52417.1| TPA: hypothetical protein ZEAMMB73_173009 [Zea mays]
Length = 234
Score = 38.9 bits (89), Expect = 0.40, Method: Composition-based stats.
Identities = 17/34 (50%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
VV+VG+ VGKS+++ R+ R F+ D K TIGV+
Sbjct: 22 VVLVGDSGVGKSNLLSRFTRNAFSLDSKSTIGVE 55
>gi|167540014|ref|XP_001741503.1| hypothetical protein [Entamoeba dispar SAW760]
gi|165893918|gb|EDR22033.1| hypothetical protein, conserved [Entamoeba dispar SAW760]
Length = 198
Score = 38.9 bits (89), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 27/40 (67%)
Query: 8 RGSIKGTVVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
R I V+++G+ +VGK+S++ RYC TF+ Y TIGV
Sbjct: 5 RDVILLKVLLIGDISVGKTSLLLRYCDSTFSTTYVTTIGV 44
>gi|326666553|ref|XP_692779.5| PREDICTED: ras and EF-hand domain-containing protein [Danio rerio]
Length = 773
Score = 38.9 bits (89), Expect = 0.40, Method: Composition-based stats.
Identities = 14/37 (37%), Positives = 26/37 (70%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSM 51
V++VGN +VGK+++++R+C G F T+G+ S+
Sbjct: 589 VILVGNSSVGKTALLRRFCDGQFHSATSATVGIDYSV 625
>gi|326437216|gb|EGD82786.1| small GTP binding protein Rab9 [Salpingoeca sp. ATCC 50818]
Length = 201
Score = 38.9 bits (89), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 26/34 (76%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
V+++G+G+VGKSS++Q++ R F + TIGV+
Sbjct: 10 VILLGDGSVGKSSLMQQFVRNEFNSESFHTIGVE 43
>gi|320582172|gb|EFW96390.1| GTP-binding protein [Ogataea parapolymorpha DL-1]
Length = 206
Score = 38.9 bits (89), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 25/33 (75%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
V+I+G+ VGK+S++Q++ G F++ YK TIG
Sbjct: 11 VIILGDSGVGKTSLMQQFINGKFSQQYKATIGA 43
>gi|260819612|ref|XP_002605130.1| hypothetical protein BRAFLDRAFT_265784 [Branchiostoma floridae]
gi|229290461|gb|EEN61140.1| hypothetical protein BRAFLDRAFT_265784 [Branchiostoma floridae]
Length = 182
Score = 38.9 bits (89), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 26/42 (61%)
Query: 6 VLRGSIKGTVVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
VL I VV +GN VGK+S+I+ +C F+ Y+ TIGV
Sbjct: 15 VLDALIWVKVVGLGNAGVGKTSLIKHFCESQFSPVYQPTIGV 56
>gi|112983314|ref|NP_001037618.1| ras-related GTP-binding protein Rab11 [Bombyx mori]
gi|102993180|gb|ABF71467.1| ras-related GTP-binding protein Rab11 [Bombyx mori]
Length = 213
Score = 38.9 bits (89), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 24/34 (70%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
VV++G+ VGKSS++ R+ R F + K TIGV+
Sbjct: 14 VVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVE 47
>gi|326434156|gb|EGD79726.1| rab GTPase [Salpingoeca sp. ATCC 50818]
Length = 210
Score = 38.9 bits (89), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 26/37 (70%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSM 51
V++VG+ VGK+S+I+RY G + YK TIGV ++
Sbjct: 13 VLVVGDSGVGKTSLIKRYVHGVASDKYKATIGVDFAL 49
>gi|15238852|ref|NP_199607.1| RAB GTPase homolog A4C [Arabidopsis thaliana]
gi|75333691|sp|Q9FE79.1|RAA4C_ARATH RecName: Full=Ras-related protein RABA4c; Short=AtRABA4c;
AltName: Full=Ras-related protein SMG1
gi|12004623|gb|AAG44121.1|AF218121_1 small molecular weight g-protein [Arabidopsis thaliana]
gi|9758522|dbj|BAB09048.1| RAS superfamily GTP-binding protein-like [Arabidopsis thaliana]
gi|89111906|gb|ABD60725.1| At5g47960 [Arabidopsis thaliana]
gi|332008216|gb|AED95599.1| RAB GTPase homolog A4C [Arabidopsis thaliana]
Length = 223
Score = 38.9 bits (89), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
VV++G+ AVGKS ++ R+ R F+ + K TIGV+
Sbjct: 18 VVLIGDSAVGKSQLLARFSRNEFSIESKATIGVE 51
>gi|67484658|ref|XP_657549.1| cell cycle-associated GTPase [Entamoeba histolytica HM-1:IMSS]
gi|167381212|ref|XP_001735623.1| septum-promoting GTP-binding protein [Entamoeba dispar SAW760]
gi|56474815|gb|EAL52171.1| cell cycle-associated GTPase, putative [Entamoeba histolytica
HM-1:IMSS]
gi|165902316|gb|EDR28173.1| septum-promoting GTP-binding protein, putative [Entamoeba dispar
SAW760]
gi|407043068|gb|EKE41717.1| cell cycle-associated GTPase, putative [Entamoeba nuttalli P19]
gi|449704011|gb|EMD44340.1| septum promoting GTP-binding protein, putative [Entamoeba
histolytica KU27]
Length = 189
Score = 38.9 bits (89), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 25/38 (65%)
Query: 11 IKGTVVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
IK + +VG+ VGK+S++ +Y G F DY +T+GV
Sbjct: 4 IKLKIAMVGDAGVGKTSLMVKYVEGNFDEDYIQTLGVN 41
>gi|440295983|gb|ELP88830.1| hypothetical protein EIN_368780 [Entamoeba invadens IP1]
Length = 201
Score = 38.9 bits (89), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 24/33 (72%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
V+++G +VGK++M++R+C F DY TIG+
Sbjct: 14 VLVIGESSVGKTAMMERFCENQFKGDYMSTIGM 46
>gi|402082661|gb|EJT77679.1| GTP-binding protein ypt3 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 360
Score = 38.9 bits (89), Expect = 0.41, Method: Composition-based stats.
Identities = 13/28 (46%), Positives = 23/28 (82%)
Query: 10 SIKGTVVIVGNGAVGKSSMIQRYCRGTF 37
S++ +V+VG+ VGK+S++ RYC+G+F
Sbjct: 3 SLEAKIVVVGSQGVGKTSLVMRYCKGSF 30
>gi|348515407|ref|XP_003445231.1| PREDICTED: ras-related protein Rab-28-like [Oreochromis
niloticus]
Length = 221
Score = 38.9 bits (89), Expect = 0.41, Method: Composition-based stats.
Identities = 15/33 (45%), Positives = 25/33 (75%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
+V+VG+GA GK+S+ R+ + F + YK+TIG+
Sbjct: 15 IVVVGDGASGKTSLATRFAQEAFGKQYKQTIGL 47
>gi|145548273|ref|XP_001459817.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74831172|emb|CAI39256.1| rab_B77 [Paramecium tetraurelia]
gi|124427644|emb|CAK92420.1| unnamed protein product [Paramecium tetraurelia]
Length = 201
Score = 38.9 bits (89), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 30/47 (63%)
Query: 7 LRGSIKGTVVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSMIQ 53
++ I+ +V +G+ AVGKSS+IQR+ + FT +T+G + S Q
Sbjct: 1 MQKPIQTKIVTLGDYAVGKSSLIQRFTKNDFTDTRTQTVGAEFSPKQ 47
>gi|402589766|gb|EJW83697.1| Ras family protein [Wuchereria bancrofti]
Length = 243
Score = 38.9 bits (89), Expect = 0.42, Method: Composition-based stats.
Identities = 15/31 (48%), Positives = 24/31 (77%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTI 45
+V++G G VGK+S+I+RY GTF Y++T+
Sbjct: 8 IVVLGPGKVGKTSIIRRYLHGTFDEKYRETV 38
>gi|440294433|gb|ELP87450.1| hypothetical protein EIN_097170 [Entamoeba invadens IP1]
Length = 73
Score = 38.9 bits (89), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 24/33 (72%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
++I+G +VGK+++++RYC G F + TIGV
Sbjct: 11 ILIIGEPSVGKTAIMERYCEGIFHEELISTIGV 43
>gi|145519165|ref|XP_001445449.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74833780|emb|CAI39355.1| rab_A55 [Paramecium tetraurelia]
gi|124412904|emb|CAK78052.1| unnamed protein product [Paramecium tetraurelia]
Length = 235
Score = 38.9 bits (89), Expect = 0.42, Method: Composition-based stats.
Identities = 16/33 (48%), Positives = 24/33 (72%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
+VI+GN VGKS+++ R+ TF+ +Y TIGV
Sbjct: 12 LVIIGNSGVGKSALLLRFADDTFSENYITTIGV 44
>gi|403336186|gb|EJY67281.1| Small rab-related GTPase [Oxytricha trifallax]
Length = 210
Score = 38.9 bits (89), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 26/33 (78%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
V+I+G+GAVGKSS++++Y FT + KT+GV
Sbjct: 3 VMILGDGAVGKSSILKQYHNQKFTNQHIKTLGV 35
>gi|390339159|ref|XP_003724945.1| PREDICTED: uncharacterized protein LOC100893185 [Strongylocentrotus
purpuratus]
Length = 550
Score = 38.9 bits (89), Expect = 0.42, Method: Composition-based stats.
Identities = 17/37 (45%), Positives = 24/37 (64%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSM 51
VV+ G+ VGKSS +QR+C TFT + + TI + M
Sbjct: 260 VVMCGDSGVGKSSFVQRFCHNTFTVNTQVTIEIGFHM 296
>gi|152992431|ref|YP_001358152.1| GTP-binding protein [Sulfurovum sp. NBC37-1]
gi|151424292|dbj|BAF71795.1| GTP-binding protein [Sulfurovum sp. NBC37-1]
Length = 158
Score = 38.9 bits (89), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 27/40 (67%)
Query: 11 IKGTVVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSS 50
I+ ++++G+ VGK+S+I+RY TF Y TIGVK S
Sbjct: 2 IRKKILLLGDFNVGKTSLIRRYIENTFEDKYLTTIGVKIS 41
>gi|84997692|ref|XP_953567.1| small GTPase (Rab11 ) [Theileria annulata]
gi|65304564|emb|CAI72889.1| small GTPase (Rab11 homologue), putative [Theileria annulata]
Length = 207
Score = 38.9 bits (89), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
+V++G+ VGKS+++ R+ +G F D K TIGV+
Sbjct: 12 IVLIGDSNVGKSNLLDRFVKGNFKLDSKSTIGVE 45
>gi|405964523|gb|EKC29998.1| RAS and EF-hand domain-containing-like protein [Crassostrea gigas]
Length = 616
Score = 38.9 bits (89), Expect = 0.42, Method: Composition-based stats.
Identities = 17/33 (51%), Positives = 20/33 (60%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
VV VG+ VGKSS I R+C F + TIGV
Sbjct: 428 VVFVGDSGVGKSSFIHRFCNDQFNPTFSATIGV 460
>gi|194747078|ref|XP_001955981.1| GF24974 [Drosophila ananassae]
gi|190623263|gb|EDV38787.1| GF24974 [Drosophila ananassae]
Length = 534
Score = 38.9 bits (89), Expect = 0.42, Method: Composition-based stats.
Identities = 15/33 (45%), Positives = 24/33 (72%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
V+ VG+ +VGK++++ R+C F +YK TIGV
Sbjct: 67 VIFVGDCSVGKTAIVNRFCFDRFQSNYKATIGV 99
>gi|170590884|ref|XP_001900201.1| small GTP-binding protein domain containing protein [Brugia
malayi]
gi|158592351|gb|EDP30951.1| small GTP-binding protein domain containing protein [Brugia
malayi]
Length = 218
Score = 38.9 bits (89), Expect = 0.42, Method: Composition-based stats.
Identities = 16/31 (51%), Positives = 22/31 (70%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTI 45
V + G G VGKSS++QR+ +GTF +Y TI
Sbjct: 19 VAVFGAGGVGKSSIVQRFIKGTFNENYIPTI 49
>gi|398365217|ref|NP_012981.3| Rho4p [Saccharomyces cerevisiae S288c]
gi|464610|sp|Q00246.2|RHO4_YEAST RecName: Full=GTP-binding protein RHO4; Flags: Precursor
gi|397359|emb|CAA81020.1| rho protein [Saccharomyces cerevisiae]
gi|486513|emb|CAA82133.1| RHO4 [Saccharomyces cerevisiae]
gi|45269709|gb|AAS56235.1| YKR055W [Saccharomyces cerevisiae]
gi|285813309|tpg|DAA09206.1| TPA: Rho4p [Saccharomyces cerevisiae S288c]
gi|392298196|gb|EIW09294.1| Rho4p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 291
Score = 38.9 bits (89), Expect = 0.43, Method: Composition-based stats.
Identities = 16/31 (51%), Positives = 23/31 (74%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTI 45
+V+VG+GAVGK+ ++ Y +GTF DY TI
Sbjct: 75 IVVVGDGAVGKTCLLISYVQGTFPTDYIPTI 105
>gi|218476|dbj|BAA00898.1| RHO4p [Saccharomyces cerevisiae]
Length = 230
Score = 38.9 bits (89), Expect = 0.43, Method: Composition-based stats.
Identities = 16/31 (51%), Positives = 23/31 (74%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTI 45
+V+VG+GAVGK+ ++ Y +GTF DY TI
Sbjct: 14 IVVVGDGAVGKTCLLISYVQGTFPTDYIPTI 44
>gi|401837940|gb|EJT41776.1| RHO4-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 283
Score = 38.9 bits (89), Expect = 0.43, Method: Composition-based stats.
Identities = 16/31 (51%), Positives = 23/31 (74%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTI 45
+V+VG+GAVGK+ ++ Y +GTF DY TI
Sbjct: 75 IVVVGDGAVGKTCLLISYVQGTFPTDYIPTI 105
>gi|401624826|gb|EJS42866.1| rho4p [Saccharomyces arboricola H-6]
Length = 292
Score = 38.9 bits (89), Expect = 0.43, Method: Composition-based stats.
Identities = 16/31 (51%), Positives = 23/31 (74%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTI 45
+V+VG+GAVGK+ ++ Y +GTF DY TI
Sbjct: 76 IVVVGDGAVGKTCLLISYVQGTFPTDYIPTI 106
>gi|365759625|gb|EHN01404.1| Rho4p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 291
Score = 38.9 bits (89), Expect = 0.43, Method: Composition-based stats.
Identities = 16/31 (51%), Positives = 23/31 (74%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTI 45
+V+VG+GAVGK+ ++ Y +GTF DY TI
Sbjct: 75 IVVVGDGAVGKTCLLISYVQGTFPTDYIPTI 105
>gi|357512579|ref|XP_003626578.1| Ras-related GTP-binding protein [Medicago truncatula]
gi|355501593|gb|AES82796.1| Ras-related GTP-binding protein [Medicago truncatula]
Length = 232
Score = 38.9 bits (89), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 24/34 (70%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
VV++G+ AVGK+ M+ R+ + F D K TIGV+
Sbjct: 43 VVVIGDSAVGKTQMLSRFAKNEFCFDSKSTIGVE 76
>gi|349579614|dbj|GAA24776.1| K7_Rho4p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 291
Score = 38.9 bits (89), Expect = 0.43, Method: Composition-based stats.
Identities = 16/31 (51%), Positives = 23/31 (74%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTI 45
+V+VG+GAVGK+ ++ Y +GTF DY TI
Sbjct: 75 IVVVGDGAVGKTCLLISYVQGTFPTDYIPTI 105
>gi|323332637|gb|EGA74043.1| Rho4p [Saccharomyces cerevisiae AWRI796]
Length = 257
Score = 38.9 bits (89), Expect = 0.43, Method: Composition-based stats.
Identities = 16/31 (51%), Positives = 23/31 (74%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTI 45
+V+VG+GAVGK+ ++ Y +GTF DY TI
Sbjct: 75 IVVVGDGAVGKTCLLISYVQGTFPTDYIPTI 105
>gi|323304039|gb|EGA57818.1| Rho4p [Saccharomyces cerevisiae FostersB]
gi|323308244|gb|EGA61493.1| Rho4p [Saccharomyces cerevisiae FostersO]
Length = 291
Score = 38.9 bits (89), Expect = 0.43, Method: Composition-based stats.
Identities = 16/31 (51%), Positives = 23/31 (74%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTI 45
+V+VG+GAVGK+ ++ Y +GTF DY TI
Sbjct: 75 IVVVGDGAVGKTCLLISYVQGTFPTDYIPTI 105
>gi|256272615|gb|EEU07593.1| Rho4p [Saccharomyces cerevisiae JAY291]
Length = 291
Score = 38.9 bits (89), Expect = 0.43, Method: Composition-based stats.
Identities = 16/31 (51%), Positives = 23/31 (74%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTI 45
+V+VG+GAVGK+ ++ Y +GTF DY TI
Sbjct: 75 IVVVGDGAVGKTCLLISYVQGTFPTDYIPTI 105
>gi|151941595|gb|EDN59958.1| GTP-binding protein [Saccharomyces cerevisiae YJM789]
gi|190409869|gb|EDV13134.1| protein RHO4 [Saccharomyces cerevisiae RM11-1a]
gi|207343359|gb|EDZ70839.1| YKR055Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|259147885|emb|CAY81135.1| Rho4p [Saccharomyces cerevisiae EC1118]
gi|323347650|gb|EGA81915.1| Rho4p [Saccharomyces cerevisiae Lalvin QA23]
gi|323354169|gb|EGA86015.1| Rho4p [Saccharomyces cerevisiae VL3]
Length = 291
Score = 38.9 bits (89), Expect = 0.43, Method: Composition-based stats.
Identities = 16/31 (51%), Positives = 23/31 (74%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTI 45
+V+VG+GAVGK+ ++ Y +GTF DY TI
Sbjct: 75 IVVVGDGAVGKTCLLISYVQGTFPTDYIPTI 105
>gi|18266417|gb|AAL67568.1|AF461435_1 small GTP binding protein rab11 [Babesia gibsoni]
Length = 212
Score = 38.9 bits (89), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
+V++G+ VGKS+++ R+ +G F D K TIGV+
Sbjct: 13 IVLIGDSNVGKSNLLDRFVKGNFKLDSKSTIGVE 46
>gi|71410339|ref|XP_807468.1| ras-related GTP-binding protein [Trypanosoma cruzi strain CL
Brener]
gi|70871478|gb|EAN85617.1| ras-related GTP-binding protein, putative [Trypanosoma cruzi]
Length = 219
Score = 38.9 bits (89), Expect = 0.43, Method: Composition-based stats.
Identities = 15/33 (45%), Positives = 22/33 (66%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
++ +G+ VGKS +I+RYC G F Y TIG+
Sbjct: 26 IISIGSSGVGKSCVIKRYCEGRFVSKYIPTIGI 58
>gi|409971725|gb|JAA00066.1| uncharacterized protein, partial [Phleum pratense]
Length = 217
Score = 38.9 bits (89), Expect = 0.43, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
+VIVG+G GK++ ++R+ G F + Y+ TIGV+
Sbjct: 12 LVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVE 45
>gi|323336786|gb|EGA78050.1| Rho4p [Saccharomyces cerevisiae Vin13]
Length = 190
Score = 38.9 bits (89), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 23/31 (74%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTI 45
+V+VG+GAVGK+ ++ Y +GTF DY TI
Sbjct: 75 IVVVGDGAVGKTCLLISYVQGTFPTDYIPTI 105
>gi|302505565|ref|XP_003014489.1| hypothetical protein ARB_07051 [Arthroderma benhamiae CBS 112371]
gi|302656407|ref|XP_003019957.1| hypothetical protein TRV_06003 [Trichophyton verrucosum HKI 0517]
gi|291178310|gb|EFE34100.1| hypothetical protein ARB_07051 [Arthroderma benhamiae CBS 112371]
gi|291183734|gb|EFE39333.1| hypothetical protein TRV_06003 [Trichophyton verrucosum HKI 0517]
Length = 230
Score = 38.9 bits (89), Expect = 0.43, Method: Composition-based stats.
Identities = 16/34 (47%), Positives = 24/34 (70%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
VV++G+ VGKS+++ R+ R F D K TIGV+
Sbjct: 19 VVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVE 52
>gi|226469320|emb|CAX70139.1| Rab-protein 11 [Schistosoma japonicum]
Length = 218
Score = 38.9 bits (89), Expect = 0.43, Method: Composition-based stats.
Identities = 16/34 (47%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
VV++G+ VGKS+++ R+ R TF + K TIGV+
Sbjct: 19 VVLIGDSGVGKSNLLSRFTRDTFDLESKSTIGVE 52
>gi|258571595|ref|XP_002544601.1| GTP-binding protein ypt3 [Uncinocarpus reesii 1704]
gi|237904871|gb|EEP79272.1| GTP-binding protein ypt3 [Uncinocarpus reesii 1704]
Length = 203
Score = 38.9 bits (89), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 24/34 (70%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
+V++G+ VGKS+++ R+ R F D K TIGV+
Sbjct: 32 IVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVE 65
>gi|124005782|ref|ZP_01690621.1| small GTP-binding protein domain [Microscilla marina ATCC 23134]
gi|123988850|gb|EAY28456.1| small GTP-binding protein domain [Microscilla marina ATCC 23134]
Length = 163
Score = 38.9 bits (89), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 27/38 (71%)
Query: 11 IKGTVVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
I V++VGN VGK+S+++R+ TF+ +Y T+GV+
Sbjct: 4 ISKKVILVGNFGVGKTSLVRRFVHQTFSDEYLTTLGVR 41
>gi|121703301|ref|XP_001269915.1| Ras GTPase Rab11, putative [Aspergillus clavatus NRRL 1]
gi|119398058|gb|EAW08489.1| Ras GTPase Rab11, putative [Aspergillus clavatus NRRL 1]
Length = 230
Score = 38.9 bits (89), Expect = 0.43, Method: Composition-based stats.
Identities = 16/34 (47%), Positives = 24/34 (70%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
VV++G+ VGKS+++ R+ R F D K TIGV+
Sbjct: 31 VVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVE 64
>gi|341038786|gb|EGS23778.1| putative GTP-binding protein [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 224
Score = 38.9 bits (89), Expect = 0.44, Method: Composition-based stats.
Identities = 16/34 (47%), Positives = 24/34 (70%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
VV++G+ VGKS+++ R+ R F D K TIGV+
Sbjct: 24 VVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVE 57
>gi|294874898|ref|XP_002767142.1| Rab11, putative [Perkinsus marinus ATCC 50983]
gi|239868591|gb|EEQ99859.1| Rab11, putative [Perkinsus marinus ATCC 50983]
Length = 228
Score = 38.9 bits (89), Expect = 0.44, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
VV++G+ VGKS+++ R+ RG F + + TIGV+
Sbjct: 18 VVLIGDSGVGKSNILSRFTRGEFNLESRSTIGVE 51
>gi|84043470|ref|XP_951525.1| small GTP-binding protein [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|33348344|gb|AAQ15670.1| small GTP-binding protein RAB6, putative [Trypanosoma brucei
brucei strain 927/4 GUTat10.1]
gi|62358719|gb|AAX79175.1| small GTP-binding protein RAB6, putative [Trypanosoma brucei]
gi|261326389|emb|CBH09349.1| small GTP-binding protein RAB6, putative [Trypanosoma brucei
gambiense DAL972]
Length = 230
Score = 38.9 bits (89), Expect = 0.44, Method: Composition-based stats.
Identities = 16/37 (43%), Positives = 27/37 (72%)
Query: 11 IKGTVVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
+K +V++G+ AVGK+S+I R+ TF + Y+ TIG+
Sbjct: 26 VKHKIVLLGDQAVGKTSLITRFMYDTFDQQYQATIGI 62
>gi|226469322|emb|CAX70140.1| Rab-protein 11 [Schistosoma japonicum]
Length = 218
Score = 38.9 bits (89), Expect = 0.44, Method: Composition-based stats.
Identities = 16/34 (47%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
VV++G+ VGKS+++ R+ R TF + K TIGV+
Sbjct: 19 VVLIGDSGVGKSNLLSRFTRDTFDLESKSTIGVE 52
>gi|388498830|gb|AFK37481.1| unknown [Medicago truncatula]
Length = 223
Score = 38.9 bits (89), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 24/34 (70%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
VV++G+ AVGK+ ++ R+ R F D K TIGV+
Sbjct: 18 VVLIGDSAVGKTQLLARFSRNQFNVDSKATIGVE 51
>gi|348540694|ref|XP_003457822.1| PREDICTED: dnaJ homolog subfamily C member 27-like [Oreochromis
niloticus]
Length = 273
Score = 38.9 bits (89), Expect = 0.44, Method: Composition-based stats.
Identities = 17/40 (42%), Positives = 25/40 (62%)
Query: 8 RGSIKGTVVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
+ S++ V+ +GN VGKS +I+RYC F Y TIG+
Sbjct: 12 KKSLRVKVISLGNAEVGKSCIIKRYCEKRFVPKYLATIGI 51
>gi|336367947|gb|EGN96291.1| hypothetical protein SERLA73DRAFT_185967 [Serpula lacrymans var.
lacrymans S7.3]
gi|336380674|gb|EGO21827.1| hypothetical protein SERLADRAFT_474770 [Serpula lacrymans var.
lacrymans S7.9]
Length = 210
Score = 38.9 bits (89), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 24/34 (70%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
VV++G+ VGKS+++ R+ R F D K TIGV+
Sbjct: 13 VVLIGDSGVGKSNLLSRFTRNEFHVDSKSTIGVE 46
>gi|388506992|gb|AFK41562.1| unknown [Medicago truncatula]
Length = 231
Score = 38.5 bits (88), Expect = 0.45, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
+V+VG+G GK++ ++R+ G F + Y+ TIGV+
Sbjct: 16 LVVVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVE 49
>gi|224284183|gb|ACN39828.1| unknown [Picea sitchensis]
Length = 221
Score = 38.5 bits (88), Expect = 0.45, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
+VIVG+G GK++ ++R+ G F + Y+ TIGV+
Sbjct: 15 LVIVGDGCTGKTTFVKRHLTGEFEKRYEPTIGVE 48
>gi|148669431|gb|EDL01378.1| RIKEN cDNA C330021A05, isoform CRA_a [Mus musculus]
gi|148669432|gb|EDL01379.1| RIKEN cDNA C330021A05, isoform CRA_a [Mus musculus]
Length = 307
Score = 38.5 bits (88), Expect = 0.45, Method: Composition-based stats.
Identities = 17/38 (44%), Positives = 24/38 (63%)
Query: 10 SIKGTVVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
S++ V+ +GN VGKS +I+RYC F Y TIG+
Sbjct: 48 SLRIKVISMGNAEVGKSCIIKRYCEKRFVSKYLATIGI 85
>gi|225467903|ref|XP_002263362.1| PREDICTED: ras-related protein RABA5e-like [Vitis vinifera]
gi|147834571|emb|CAN69655.1| hypothetical protein VITISV_000615 [Vitis vinifera]
gi|296080913|emb|CBI18743.3| unnamed protein product [Vitis vinifera]
Length = 215
Score = 38.5 bits (88), Expect = 0.45, Method: Composition-based stats.
Identities = 17/34 (50%), Positives = 24/34 (70%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
+VI+G+ AVGKS+++ RY R F K TIGV+
Sbjct: 12 IVIIGDSAVGKSNLLSRYARNEFDLHSKATIGVE 45
>gi|123496328|ref|XP_001326942.1| Ras family protein [Trichomonas vaginalis G3]
gi|121909864|gb|EAY14719.1| Ras family protein [Trichomonas vaginalis G3]
Length = 218
Score = 38.5 bits (88), Expect = 0.45, Method: Composition-based stats.
Identities = 15/33 (45%), Positives = 23/33 (69%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
+++VG GK+S+I++Y G F+ YK TIGV
Sbjct: 18 IIVVGEMGTGKTSLIRQYVHGAFSEFYKSTIGV 50
>gi|393238684|gb|EJD46220.1| ras-domain-containing protein [Auricularia delicata TFB-10046
SS5]
Length = 213
Score = 38.5 bits (88), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 23/33 (69%)
Query: 16 VIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
VIVG+ VGK++M+ R+ R F+ D K TIGV
Sbjct: 14 VIVGDSGVGKTNMLSRFTRNEFSIDSKSTIGVD 46
>gi|299472101|emb|CBN77086.1| Rab32B, RAB family GTPase [Ectocarpus siliculosus]
Length = 570
Score = 38.5 bits (88), Expect = 0.45, Method: Composition-based stats.
Identities = 16/42 (38%), Positives = 25/42 (59%)
Query: 10 SIKGTVVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSM 51
++ V++VGN GKSS+I R+ F+ DY T+G +M
Sbjct: 349 TVTCKVLVVGNAKCGKSSIISRFVSNRFSSDYNSTVGADYAM 390
>gi|357603306|gb|EHJ63705.1| ras-related GTP-binding protein Rab11 [Danaus plexippus]
Length = 213
Score = 38.5 bits (88), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 24/34 (70%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
VV++G+ VGKSS++ R+ R F + K TIGV+
Sbjct: 14 VVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVE 47
>gi|255636322|gb|ACU18500.1| unknown [Glycine max]
Length = 209
Score = 38.5 bits (88), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
VV++G+ AVGK+ ++ R+ + F+ D K TIGV+
Sbjct: 19 VVLIGDSAVGKTQLLARFAKNQFSVDSKATIGVE 52
>gi|225708424|gb|ACO10058.1| GTP-binding nuclear protein Ran [Osmerus mordax]
Length = 216
Score = 38.5 bits (88), Expect = 0.45, Method: Composition-based stats.
Identities = 15/43 (34%), Positives = 29/43 (67%)
Query: 6 VLRGSIKGTVVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
V+ S++ +V+VG+G GK++ ++R+ G F + Y T+GV+
Sbjct: 4 VVEPSVQFKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVE 46
>gi|55742336|ref|NP_001007163.1| dnaJ homolog subfamily C member 27 [Danio rerio]
gi|82236746|sp|Q6IMK3.1|DJC27_DANRE RecName: Full=DnaJ homolog subfamily C member 27; AltName:
Full=Rab and DnaJ domain-containing protein
gi|42491777|tpg|DAA01381.1| TPA_exp: Rbj [Danio rerio]
gi|190337108|gb|AAI62873.1| Rab and DnaJ domain-containing [Danio rerio]
gi|190339572|gb|AAI62857.1| Rab and DnaJ domain-containing [Danio rerio]
Length = 273
Score = 38.5 bits (88), Expect = 0.46, Method: Composition-based stats.
Identities = 17/40 (42%), Positives = 25/40 (62%)
Query: 8 RGSIKGTVVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
+ S++ V+ +GN VGKS +I+RYC F Y TIG+
Sbjct: 12 KKSLRVKVISLGNAEVGKSCIIKRYCEKRFVPKYLATIGI 51
>gi|145532455|ref|XP_001451983.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834449|emb|CAI44549.1| rab_B01 [Paramecium tetraurelia]
gi|124419660|emb|CAK84586.1| unnamed protein product [Paramecium tetraurelia]
Length = 233
Score = 38.5 bits (88), Expect = 0.46, Method: Composition-based stats.
Identities = 17/33 (51%), Positives = 23/33 (69%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
+VI+GN VGKSS++ RY F+ +Y TIGV
Sbjct: 12 LVIIGNSGVGKSSLLIRYADDKFSENYISTIGV 44
>gi|403353782|gb|EJY76436.1| Rab GTPase 2c [Oxytricha trifallax]
Length = 261
Score = 38.5 bits (88), Expect = 0.47, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
V+++GN VGKS ++QR+ R F D++ T+GV+
Sbjct: 63 VIVIGNSGVGKSCIMQRFLRNEFRDDHEVTLGVE 96
>gi|343418356|emb|CCD19762.1| small GTPase, putative [Trypanosoma vivax Y486]
Length = 200
Score = 38.5 bits (88), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 23/34 (67%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
+++VG A GKSS++ R+ F+ D +TIGV+
Sbjct: 11 LIVVGESATGKSSLLHRFVEDAFSEDQAQTIGVE 44
>gi|294943805|ref|XP_002783965.1| Rab11, putative [Perkinsus marinus ATCC 50983]
gi|239896947|gb|EER15761.1| Rab11, putative [Perkinsus marinus ATCC 50983]
Length = 228
Score = 38.5 bits (88), Expect = 0.47, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
VV++G+ VGKS+++ R+ RG F + + TIGV+
Sbjct: 18 VVLIGDSGVGKSNILSRFTRGEFNLESRSTIGVE 51
>gi|183231921|ref|XP_001913638.1| ras-related protein Rab-1A [Entamoeba histolytica HM-1:IMSS]
gi|169802266|gb|EDS89582.1| ras-related protein Rab-1A, putative [Entamoeba histolytica
HM-1:IMSS]
gi|449706053|gb|EMD45979.1| Ras-related protein Rab-1A, putative [Entamoeba histolytica KU27]
Length = 198
Score = 38.5 bits (88), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 27/40 (67%)
Query: 8 RGSIKGTVVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
R I V+++G+ +VGK+S++ RYC TF+ Y TIGV
Sbjct: 5 RDVILLKVLLIGDISVGKTSLLLRYCDSTFSTTYITTIGV 44
>gi|449504214|ref|XP_002198303.2| PREDICTED: EF-hand calcium-binding domain-containing protein
4A-like [Taeniopygia guttata]
Length = 586
Score = 38.5 bits (88), Expect = 0.47, Method: Composition-based stats.
Identities = 17/33 (51%), Positives = 20/33 (60%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
VV VGN VGKSS I R+C F + TIG+
Sbjct: 401 VVFVGNSGVGKSSFIHRFCYDRFLAELNATIGI 433
>gi|47227097|emb|CAG00459.1| unnamed protein product [Tetraodon nigroviridis]
Length = 218
Score = 38.5 bits (88), Expect = 0.48, Method: Composition-based stats.
Identities = 15/37 (40%), Positives = 27/37 (72%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSM 51
V+++G+ VGK+S+I+RY ++ +Y+ TIGV +M
Sbjct: 22 VLVIGDLGVGKTSIIRRYVHQAYSNNYRATIGVDFAM 58
>gi|358056852|dbj|GAA97202.1| hypothetical protein E5Q_03878 [Mixia osmundae IAM 14324]
Length = 236
Score = 38.5 bits (88), Expect = 0.48, Method: Composition-based stats.
Identities = 16/40 (40%), Positives = 27/40 (67%)
Query: 8 RGSIKGTVVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
R S+ V +VG+ +GK+S++ +Y G+F DY +T+GV
Sbjct: 44 RNSVVIKVGMVGDSQIGKTSLMVKYVEGSFDEDYIQTLGV 83
>gi|341903548|gb|EGT59483.1| CBN-GLO-1 protein [Caenorhabditis brenneri]
Length = 212
Score = 38.5 bits (88), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 27/37 (72%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSM 51
V+++G+ VGK+S+I+R+ F+ +YK TIGV ++
Sbjct: 14 VLVIGDPGVGKTSIIRRFVHNVFSSNYKTTIGVDFAL 50
>gi|332304685|ref|YP_004432536.1| small GTP-binding protein [Glaciecola sp. 4H-3-7+YE-5]
gi|332172014|gb|AEE21268.1| small GTP-binding protein [Glaciecola sp. 4H-3-7+YE-5]
Length = 167
Score = 38.5 bits (88), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 28/48 (58%)
Query: 11 IKGTVVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSMIQRYCRG 58
I+ + ++G AVGK+S+I+++ G F+ Y +IGVK Q C
Sbjct: 2 IQKKICLLGASAVGKTSLIKQFVEGIFSEKYLTSIGVKIDKKQVECEA 49
>gi|296423250|ref|XP_002841168.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295637402|emb|CAZ85359.1| unnamed protein product [Tuber melanosporum]
Length = 300
Score = 38.5 bits (88), Expect = 0.48, Method: Composition-based stats.
Identities = 16/40 (40%), Positives = 27/40 (67%)
Query: 8 RGSIKGTVVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
R S+ V +VG+ +GK+S++ +Y G+F DY +T+GV
Sbjct: 108 RNSVVIKVGMVGDAQIGKTSLMVKYVEGSFDEDYIQTLGV 147
>gi|432896027|ref|XP_004076264.1| PREDICTED: ras-related protein Rab-38-like [Oryzias latipes]
Length = 218
Score = 38.5 bits (88), Expect = 0.48, Method: Composition-based stats.
Identities = 15/37 (40%), Positives = 28/37 (75%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSM 51
V+++G+ VGK+S+I+RY T++ +Y+ TIGV ++
Sbjct: 22 VLVIGDLGVGKTSIIRRYVHQTYSTNYRATIGVDFAL 58
>gi|405944797|pdb|3TSO|A Chain A, Structure Of The Cancer Associated Rab25 Protein In
Complex With Fip2
gi|405944798|pdb|3TSO|B Chain B, Structure Of The Cancer Associated Rab25 Protein In
Complex With Fip2
Length = 178
Score = 38.5 bits (88), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 25/36 (69%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSS 50
VV++G VGK++++ R+ R F+ D + TIGV+ S
Sbjct: 13 VVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFS 48
>gi|403360527|gb|EJY79942.1| Protein MIG-2 [Oxytricha trifallax]
Length = 199
Score = 38.5 bits (88), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 23/37 (62%)
Query: 9 GSIKGTVVIVGNGAVGKSSMIQRYCRGTFTRDYKKTI 45
IK V+VG+G VGK+ MI YC+ TF D+ T+
Sbjct: 5 DEIKIKCVVVGDGYVGKTCMIMSYCQDTFPVDHIPTV 41
>gi|410906295|ref|XP_003966627.1| PREDICTED: dnaJ homolog subfamily C member 27-like [Takifugu
rubripes]
Length = 273
Score = 38.5 bits (88), Expect = 0.49, Method: Composition-based stats.
Identities = 17/40 (42%), Positives = 25/40 (62%)
Query: 8 RGSIKGTVVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
+ S++ V+ +GN VGKS +I+RYC F Y TIG+
Sbjct: 12 KKSLRVKVISLGNAEVGKSCIIKRYCEKRFVPKYLATIGI 51
>gi|385301293|gb|EIF45495.1| gtpase rab7 [Dekkera bruxellensis AWRI1499]
Length = 205
Score = 38.5 bits (88), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
V+I+G+ VGK+S++Q++ G F++ YK TIG
Sbjct: 11 VIILGDSGVGKTSLMQQFINGKFSQQYKATIGAD 44
>gi|195336678|ref|XP_002034960.1| GM14184 [Drosophila sechellia]
gi|194128053|gb|EDW50096.1| GM14184 [Drosophila sechellia]
Length = 193
Score = 38.5 bits (88), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 25/37 (67%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSM 51
V+ VG+ +VGK++++ R+C F +YK TIGV +
Sbjct: 67 VIFVGDCSVGKTAIVNRFCYDKFQSNYKATIGVDFEL 103
>gi|119497347|ref|XP_001265432.1| Ras GTPase Rab11, putative [Neosartorya fischeri NRRL 181]
gi|119413594|gb|EAW23535.1| Ras GTPase Rab11, putative [Neosartorya fischeri NRRL 181]
Length = 224
Score = 38.5 bits (88), Expect = 0.49, Method: Composition-based stats.
Identities = 15/35 (42%), Positives = 25/35 (71%)
Query: 14 TVVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
++V++G+ VGKS+++ R+ R F D K TIGV+
Sbjct: 25 SLVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVE 59
>gi|123392476|ref|XP_001300248.1| Ras-related protein Rab11C [Trichomonas vaginalis G3]
gi|62736254|gb|AAX97456.1| small Rab GTPase Rab11a [Trichomonas vaginalis]
gi|121881256|gb|EAX87318.1| Ras-related protein Rab11C, putative [Trichomonas vaginalis G3]
Length = 211
Score = 38.5 bits (88), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 24/34 (70%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
+V++G+ VGK++++ R+ R F D K TIGV+
Sbjct: 12 IVLIGDSGVGKTNLLSRFARDQFNPDSKSTIGVE 45
>gi|307777904|dbj|BAJ21348.1| Rab-family small GTPase RabX3B [Tetrahymena thermophila]
Length = 212
Score = 38.5 bits (88), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 22/33 (66%)
Query: 16 VIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
+IVG+ VGKS M+ RY + F DY TIGV+
Sbjct: 6 IIVGDSGVGKSCMLIRYSKNDFVTDYNATIGVE 38
>gi|169597663|ref|XP_001792255.1| hypothetical protein SNOG_01620 [Phaeosphaeria nodorum SN15]
gi|160707568|gb|EAT91269.2| hypothetical protein SNOG_01620 [Phaeosphaeria nodorum SN15]
Length = 215
Score = 38.5 bits (88), Expect = 0.49, Method: Composition-based stats.
Identities = 16/35 (45%), Positives = 24/35 (68%)
Query: 14 TVVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
T V++G+ VGKS+++ R+ R F D K TIGV+
Sbjct: 14 TFVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVE 48
>gi|340052328|emb|CCC46604.1| putative small GTP-binding protein RAB6 [Trypanosoma vivax Y486]
Length = 223
Score = 38.5 bits (88), Expect = 0.49, Method: Composition-based stats.
Identities = 16/33 (48%), Positives = 24/33 (72%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
VV++G+ +VGK+S+I R+ GTF Y TIG+
Sbjct: 13 VVLLGDQSVGKTSIITRFINGTFEESYHATIGI 45
>gi|71994817|ref|NP_001024837.1| Protein GLO-1 [Caenorhabditis elegans]
gi|63108011|emb|CAE17932.2| Protein GLO-1 [Caenorhabditis elegans]
gi|66170981|gb|AAY42967.1| Rab GTPase GLO-1 [Caenorhabditis elegans]
Length = 212
Score = 38.5 bits (88), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 27/37 (72%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSM 51
V+++G+ VGK+S+I+R+ F+ +YK TIGV ++
Sbjct: 14 VLVIGDPGVGKTSIIRRFVHNVFSSNYKTTIGVDFAL 50
>gi|403356117|gb|EJY77649.1| Small GTP-binding protein domain containing protein [Oxytricha
trifallax]
Length = 414
Score = 38.5 bits (88), Expect = 0.50, Method: Composition-based stats.
Identities = 16/33 (48%), Positives = 21/33 (63%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
++ VGN VGKS +I+RYC F Y TIG+
Sbjct: 242 IISVGNQEVGKSCLIKRYCEEKFVERYISTIGI 274
>gi|156392463|ref|XP_001636068.1| predicted protein [Nematostella vectensis]
gi|156223167|gb|EDO44005.1| predicted protein [Nematostella vectensis]
Length = 270
Score = 38.5 bits (88), Expect = 0.51, Method: Composition-based stats.
Identities = 16/37 (43%), Positives = 23/37 (62%)
Query: 11 IKGTVVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
I+ ++ +GN VGKS +I+RYC F Y TIG+
Sbjct: 11 IRVKIISMGNAEVGKSCIIKRYCEKRFISKYMTTIGI 47
>gi|45185943|ref|NP_983659.1| ACR257Cp [Ashbya gossypii ATCC 10895]
gi|50401184|sp|Q9P8V0.1|RHO4_ASHGO RecName: Full=GTP-binding protein RHO4; Flags: Precursor
gi|7274249|gb|AAF44725.1|AF195008_1 Rho4 [Eremothecium gossypii]
gi|44981733|gb|AAS51483.1| ACR257Cp [Ashbya gossypii ATCC 10895]
gi|374106866|gb|AEY95775.1| FACR257Cp [Ashbya gossypii FDAG1]
Length = 259
Score = 38.5 bits (88), Expect = 0.51, Method: Composition-based stats.
Identities = 15/31 (48%), Positives = 22/31 (70%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTI 45
+V+VG+GA GK+S++ Y +G F DY TI
Sbjct: 55 IVVVGDGATGKTSLLMSYTQGQFPEDYVPTI 85
>gi|407689061|ref|YP_006804234.1| small GTP-binding protein [Alteromonas macleodii str. 'Balearic
Sea AD45']
gi|407292441|gb|AFT96753.1| small GTP-binding protein [Alteromonas macleodii str. 'Balearic
Sea AD45']
Length = 161
Score = 38.5 bits (88), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 26/38 (68%)
Query: 11 IKGTVVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
I+ V I+G VGK+S+++++ G F+ YK TIGVK
Sbjct: 2 IQKKVCILGPTGVGKTSLVKQFVEGIFSEKYKTTIGVK 39
>gi|340501006|gb|EGR27830.1| ras oncogene family protein, putative [Ichthyophthirius
multifiliis]
Length = 190
Score = 38.5 bits (88), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 22/33 (66%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
+VIVG G VGK+S+ RYC+ F+ D + TI
Sbjct: 10 IVIVGEGRVGKTSITLRYCQDQFSEDQESTINA 42
>gi|294887922|ref|XP_002772283.1| Rab11, putative [Perkinsus marinus ATCC 50983]
gi|239876358|gb|EER04099.1| Rab11, putative [Perkinsus marinus ATCC 50983]
Length = 234
Score = 38.5 bits (88), Expect = 0.51, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
VV++G+ VGKS+++ R+ RG F + + TIGV+
Sbjct: 21 VVLIGDSGVGKSNILSRFTRGEFNLESRSTIGVE 54
>gi|212723022|ref|NP_001131943.1| Ras protein Rab11A [Zea mays]
gi|194692980|gb|ACF80574.1| unknown [Zea mays]
gi|195641328|gb|ACG40132.1| ras-related protein Rab11A [Zea mays]
gi|414589227|tpg|DAA39798.1| TPA: Ras protein Rab11A [Zea mays]
Length = 223
Score = 38.5 bits (88), Expect = 0.51, Method: Composition-based stats.
Identities = 16/34 (47%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
VV++G+ VGKS+++ R+ + TF D K TIGV+
Sbjct: 21 VVLIGDSGVGKSNLLSRFTKNTFALDSKSTIGVE 54
>gi|432848874|ref|XP_004066494.1| PREDICTED: dnaJ homolog subfamily C member 27-like [Oryzias
latipes]
Length = 272
Score = 38.5 bits (88), Expect = 0.51, Method: Composition-based stats.
Identities = 17/40 (42%), Positives = 25/40 (62%)
Query: 8 RGSIKGTVVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
+ S++ V+ +GN VGKS +I+RYC F Y TIG+
Sbjct: 11 KKSLRVKVISLGNAEVGKSCIIKRYCEKRFVPKYLATIGI 50
>gi|440803956|gb|ELR24839.1| Rab8/RabEfamily small GTPase, putative [Acanthamoeba castellanii
str. Neff]
Length = 208
Score = 38.5 bits (88), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 24/33 (72%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
+++VG+ VGKS ++QR+ GTFT + TIG+
Sbjct: 13 MLLVGDSGVGKSCLLQRFSDGTFTHSFMPTIGI 45
>gi|157820973|ref|NP_001102372.1| ras-related protein Rab-32 [Rattus norvegicus]
gi|149039546|gb|EDL93708.1| similar to RAB32 (predicted), isoform CRA_a [Rattus norvegicus]
Length = 223
Score = 38.5 bits (88), Expect = 0.52, Method: Composition-based stats.
Identities = 15/37 (40%), Positives = 27/37 (72%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSM 51
V+++G VGK+S+I+RY F+++Y+ TIGV ++
Sbjct: 26 VLVIGELGVGKTSIIKRYVHQLFSQNYRATIGVDFAL 62
>gi|354497825|ref|XP_003511018.1| PREDICTED: ras-related protein Rab-32-like [Cricetulus griseus]
gi|344237517|gb|EGV93620.1| Ras-related protein Rab-32 [Cricetulus griseus]
Length = 223
Score = 38.5 bits (88), Expect = 0.52, Method: Composition-based stats.
Identities = 15/37 (40%), Positives = 27/37 (72%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSM 51
V+++G VGK+S+I+RY F+++Y+ TIGV ++
Sbjct: 26 VLVIGELGVGKTSIIKRYVHQLFSQNYRATIGVDFAL 62
>gi|427778911|gb|JAA54907.1| Putative rab35 member ras oncoprotein family [Rhipicephalus
pulchellus]
Length = 257
Score = 38.5 bits (88), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 39/89 (43%), Gaps = 34/89 (38%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV--------------------------- 47
++I+G+ VGKSS++ R+ TFT +Y TIGV
Sbjct: 11 LLIIGDSGVGKSSLLLRFADNTFTGNYITTIGVDFKIRTLEVDGERVKLQIWDTAGQERF 70
Query: 48 -------KSSMIQRYCRGTFTRDYKKTIG 69
KSS++ R+ TFT +Y TIG
Sbjct: 71 RGDSGVGKSSLLLRFADNTFTGNYITTIG 99
>gi|393222433|gb|EJD07917.1| small GTPase [Fomitiporia mediterranea MF3/22]
Length = 233
Score = 38.5 bits (88), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 28/44 (63%), Gaps = 4/44 (9%)
Query: 8 RGSIKGTVVI----VGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
G K +VVI VG+ +GK+S++ +Y G+F DY +T+GV
Sbjct: 37 EGDEKNSVVIKVGMVGDSQIGKTSLMVKYVEGSFDEDYIQTLGV 80
>gi|341605683|gb|AEK84227.1| GTP-binding protein [Cucurbita maxima]
Length = 221
Score = 38.5 bits (88), Expect = 0.52, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
+V+VG+G GK++ ++R+ G F + Y+ TIGV+
Sbjct: 16 LVLVGDGGTGKTTFVKRHVTGEFEKKYEPTIGVE 49
>gi|341881403|gb|EGT37338.1| hypothetical protein CAEBREN_30856 [Caenorhabditis brenneri]
Length = 283
Score = 38.5 bits (88), Expect = 0.52, Method: Composition-based stats.
Identities = 14/33 (42%), Positives = 24/33 (72%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
++I+GN +VGK+S + RYC +FT + T+G+
Sbjct: 89 LLIIGNSSVGKTSFLFRYCDDSFTSAFVSTVGI 121
>gi|302851390|ref|XP_002957219.1| hypothetical protein VOLCADRAFT_110055 [Volvox carteri f.
nagariensis]
gi|300257469|gb|EFJ41717.1| hypothetical protein VOLCADRAFT_110055 [Volvox carteri f.
nagariensis]
Length = 223
Score = 38.5 bits (88), Expect = 0.52, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
+V+VG+G GK++ ++R+ G F + Y+ TIGV+
Sbjct: 17 LVLVGDGGTGKTTFVKRHVTGEFEKKYEPTIGVE 50
>gi|149394773|gb|ABR27273.1| Rab A61 [Nyctotherus ovalis]
Length = 206
Score = 38.5 bits (88), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 23/33 (69%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
++++GN VGKS ++ RY TFT ++ TIGV
Sbjct: 15 LLLIGNSGVGKSCLLMRYAENTFTENFFNTIGV 47
>gi|4355|emb|CAA78500.1| RhoNUC protein [Saccharomyces cerevisiae]
Length = 485
Score = 38.5 bits (88), Expect = 0.52, Method: Composition-based stats.
Identities = 16/31 (51%), Positives = 23/31 (74%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTI 45
+V+VG+GAVGK+ ++ Y +GTF DY TI
Sbjct: 74 IVVVGDGAVGKTCLLISYVQGTFPTDYIPTI 104
>gi|407036906|gb|EKE38386.1| Rab family GTPase [Entamoeba nuttalli P19]
Length = 195
Score = 38.5 bits (88), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 24/33 (72%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
++++G +VGK+S+++RYC G F + T+G+
Sbjct: 11 ILMIGESSVGKTSLVKRYCEGMFLEEMMSTVGI 43
>gi|440494406|gb|ELQ76787.1| GTPase Rab1/YPT1, small G protein superfamily [Trachipleistophora
hominis]
Length = 198
Score = 38.5 bits (88), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 23/32 (71%)
Query: 16 VIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
+++GN VGK+S+I RY T+T +Y TIGV
Sbjct: 11 ILIGNSGVGKTSIINRYVDETYTENYISTIGV 42
>gi|168046618|ref|XP_001775770.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672922|gb|EDQ59453.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 221
Score = 38.5 bits (88), Expect = 0.53, Method: Composition-based stats.
Identities = 16/34 (47%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
VV++G+ AVGKS ++ R+ R F+ + K TIGV+
Sbjct: 18 VVLIGDSAVGKSQLLARFSRNEFSLESKATIGVE 51
>gi|145501011|ref|XP_001436488.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124403628|emb|CAK69091.1| unnamed protein product [Paramecium tetraurelia]
Length = 209
Score = 38.5 bits (88), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 23/33 (69%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
+VIVGN VGKSS++ R+ TF+ Y TIGV
Sbjct: 11 LVIVGNSGVGKSSLLLRFSDDTFSDSYLTTIGV 43
>gi|260795434|ref|XP_002592710.1| hypothetical protein BRAFLDRAFT_67150 [Branchiostoma floridae]
gi|229277933|gb|EEN48721.1| hypothetical protein BRAFLDRAFT_67150 [Branchiostoma floridae]
Length = 211
Score = 38.5 bits (88), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 23/37 (62%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSM 51
VV+VG+ VGK+S I R CR F + TIGV S +
Sbjct: 58 VVMVGDSVVGKTSFILRVCRDEFKPNLNPTIGVDSQV 94
>gi|67470129|ref|XP_651035.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|56467717|gb|EAL45649.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|56790064|dbj|BAD82828.1| small GTPase EhRabC8 [Entamoeba histolytica]
gi|449709773|gb|EMD48974.1| small GTPase EhRabC8, putative [Entamoeba histolytica KU27]
Length = 195
Score = 38.5 bits (88), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 24/33 (72%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
++++G +VGK+S+++RYC G F + T+G+
Sbjct: 11 ILMIGESSVGKTSLVKRYCEGMFLEEMMSTVGI 43
>gi|47214454|emb|CAF95789.1| unnamed protein product [Tetraodon nigroviridis]
Length = 278
Score = 38.5 bits (88), Expect = 0.54, Method: Composition-based stats.
Identities = 17/40 (42%), Positives = 25/40 (62%)
Query: 8 RGSIKGTVVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
+ S++ V+ +GN VGKS +I+RYC F Y TIG+
Sbjct: 12 KKSLRVKVISLGNAEVGKSCIIKRYCEKRFVPKYLATIGI 51
>gi|407039638|gb|EKE39741.1| ras-related protein Rab-1A, putative [Entamoeba nuttalli P19]
Length = 197
Score = 38.5 bits (88), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 25/33 (75%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
V+++G+ +VGK+S++ RYC TF+ Y TIGV
Sbjct: 11 VLLIGDISVGKTSLLLRYCDSTFSTTYITTIGV 43
>gi|297807067|ref|XP_002871417.1| hypothetical protein ARALYDRAFT_325580 [Arabidopsis lyrata subsp.
lyrata]
gi|297317254|gb|EFH47676.1| hypothetical protein ARALYDRAFT_325580 [Arabidopsis lyrata subsp.
lyrata]
Length = 226
Score = 38.5 bits (88), Expect = 0.54, Method: Composition-based stats.
Identities = 16/34 (47%), Positives = 24/34 (70%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
+V++G+ VGKS ++ RY R F+ D K TIGV+
Sbjct: 20 LVLIGDSGVGKSQILSRYARNEFSLDSKATIGVE 53
>gi|126031605|pdb|2OIL|A Chain A, Crystal Structure Of Human Rab25 In Complex With Gdp
Length = 193
Score = 38.5 bits (88), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 25/36 (69%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSS 50
VV++G VGK++++ R+ R F+ D + TIGV+ S
Sbjct: 28 VVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFS 63
>gi|72384499|gb|AAZ67615.1| 80A08_30 [Brassica rapa subsp. pekinensis]
Length = 223
Score = 38.5 bits (88), Expect = 0.55, Method: Composition-based stats.
Identities = 16/34 (47%), Positives = 24/34 (70%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
+V++G+ VGKS ++ RY R F+ D K TIGV+
Sbjct: 19 LVLIGDSGVGKSQILSRYARNEFSLDSKATIGVE 52
>gi|74831253|emb|CAI39271.1| rab_C85 [Paramecium tetraurelia]
Length = 219
Score = 38.5 bits (88), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 22/33 (66%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
V+++GN VGKS M+ RY FT ++ TIGV
Sbjct: 13 VLLIGNSGVGKSCMLMRYSENQFTNNFYNTIGV 45
>gi|145536137|ref|XP_001453796.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74831462|emb|CAI39310.1| rab_C28 [Paramecium tetraurelia]
gi|124421529|emb|CAK86399.1| unnamed protein product [Paramecium tetraurelia]
Length = 218
Score = 38.5 bits (88), Expect = 0.55, Method: Composition-based stats.
Identities = 15/33 (45%), Positives = 23/33 (69%)
Query: 16 VIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
+I+G+ VGKS ++ RY + FT +Y TIGV+
Sbjct: 13 IIIGDAGVGKSCLLMRYMKDDFTTEYNVTIGVE 45
>gi|74833846|emb|CAI39376.1| rab_A02 [Paramecium tetraurelia]
Length = 201
Score = 38.5 bits (88), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 23/33 (69%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
+VIVGN VGKSS++ R+ TF+ Y TIGV
Sbjct: 11 LVIVGNSGVGKSSLLLRFSDDTFSDSYLTTIGV 43
>gi|56758728|gb|AAW27504.1| SJCHGC09130 protein [Schistosoma japonicum]
Length = 228
Score = 38.5 bits (88), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
VV++G+ VGKS+++ R+ R TF + K TIGV+
Sbjct: 30 VVLIGDSGVGKSNLLSRFTRDTFDLESKSTIGVE 63
>gi|9789019|gb|AAF98238.1| unknown [Homo sapiens]
Length = 256
Score = 38.5 bits (88), Expect = 0.55, Method: Composition-based stats.
Identities = 15/36 (41%), Positives = 25/36 (69%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSS 50
VV++G VGK++++ R+ R F+ D + TIGV+ S
Sbjct: 15 VVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFS 50
>gi|71019857|ref|XP_760159.1| hypothetical protein UM04012.1 [Ustilago maydis 521]
gi|46099876|gb|EAK85109.1| hypothetical protein UM04012.1 [Ustilago maydis 521]
gi|68051237|tpe|CAI77247.1| TPA: Ras-GTPase [Ustilago maydis 521]
Length = 297
Score = 38.5 bits (88), Expect = 0.55, Method: Composition-based stats.
Identities = 15/33 (45%), Positives = 24/33 (72%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
V +VG+ +GK+S++ RY G+F DY +T+GV
Sbjct: 38 VGMVGDSQIGKTSLMVRYVEGSFNEDYIQTLGV 70
>gi|145493011|ref|XP_001432502.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74831508|emb|CAI39319.1| rab_A65 [Paramecium tetraurelia]
gi|124399614|emb|CAK65105.1| unnamed protein product [Paramecium tetraurelia]
Length = 219
Score = 38.5 bits (88), Expect = 0.55, Method: Composition-based stats.
Identities = 16/33 (48%), Positives = 22/33 (66%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
V+++GN VGKS M+ RY FT ++ TIGV
Sbjct: 22 VLLIGNSGVGKSCMLMRYSENQFTNNFYNTIGV 54
>gi|66772871|gb|AAY55746.1| IP10163p [Drosophila melanogaster]
Length = 191
Score = 38.5 bits (88), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 24/33 (72%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
V+ VG+ +VGK++++ R+C F +YK TIGV
Sbjct: 65 VIFVGDCSVGKTAIVNRFCYDKFQSNYKATIGV 97
>gi|66772757|gb|AAY55690.1| IP10063p [Drosophila melanogaster]
Length = 205
Score = 38.5 bits (88), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 25/37 (67%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSM 51
V+ VG+ +VGK++++ R+C F +YK TIGV +
Sbjct: 79 VIFVGDCSVGKTAIVNRFCYDKFQSNYKATIGVDFEL 115
>gi|434400030|ref|YP_007134034.1| small GTP-binding protein [Stanieria cyanosphaera PCC 7437]
gi|428271127|gb|AFZ37068.1| small GTP-binding protein [Stanieria cyanosphaera PCC 7437]
Length = 175
Score = 38.5 bits (88), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 27/41 (65%)
Query: 10 SIKGTVVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSS 50
I + +VG+ +VGK+S+I+R+ F+ DY T+GVK S
Sbjct: 3 EIAKKICLVGDFSVGKTSLIRRFVEDKFSDDYLSTVGVKIS 43
>gi|320165284|gb|EFW42183.1| sid3 [Capsaspora owczarzaki ATCC 30864]
Length = 218
Score = 38.5 bits (88), Expect = 0.56, Method: Composition-based stats.
Identities = 18/43 (41%), Positives = 28/43 (65%), Gaps = 4/43 (9%)
Query: 9 GSIKGTVVI----VGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
G K +VV+ VG+ +GK+S++ +Y GTF DY +T+GV
Sbjct: 26 GQKKNSVVVKVGMVGDSQIGKTSLMVKYVEGTFDEDYIQTLGV 68
>gi|183979270|dbj|BAG30796.1| similar to CG5771-PA [Papilio xuthus]
Length = 72
Score = 38.5 bits (88), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 24/34 (70%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
VV++G+ VGKSS++ R+ R F + K TIGV+
Sbjct: 14 VVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVE 47
>gi|145481547|ref|XP_001426796.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834511|emb|CAI44568.1| rab_A29 [Paramecium tetraurelia]
gi|124393873|emb|CAK59398.1| unnamed protein product [Paramecium tetraurelia]
Length = 209
Score = 38.5 bits (88), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 23/33 (69%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
+VIVGN VGKSS++ R+ TF+ Y TIGV
Sbjct: 11 LVIVGNSGVGKSSLLLRFSDDTFSDSYLTTIGV 43
>gi|1710008|sp|P54766.1|RAN1B_LOTJA RecName: Full=GTP-binding nuclear protein Ran1B
gi|1370205|emb|CAA98188.1| RAN1B [Lotus japonicus]
Length = 209
Score = 38.5 bits (88), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 27/41 (65%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSMIQRY 55
+VIVG+G GK++ ++R+ G F + Y+ TIGV+ + +
Sbjct: 4 LVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFF 44
>gi|383856774|ref|XP_003703882.1| PREDICTED: ras-related protein Rab-28-like [Megachile rotundata]
Length = 238
Score = 38.5 bits (88), Expect = 0.57, Method: Composition-based stats.
Identities = 15/36 (41%), Positives = 23/36 (63%)
Query: 12 KGTVVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
K +V+VG+ GK+S+ Q++C FTR Y T G+
Sbjct: 12 KLKIVLVGDSGSGKTSIAQKFCNNEFTRQYTPTSGI 47
>gi|380028583|ref|XP_003697974.1| PREDICTED: ras-related protein Rab-28-like [Apis florea]
Length = 239
Score = 38.5 bits (88), Expect = 0.57, Method: Composition-based stats.
Identities = 15/36 (41%), Positives = 23/36 (63%)
Query: 12 KGTVVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
K +V+VG+ GK+S+ Q++C FTR Y T G+
Sbjct: 12 KLKIVLVGDSGSGKTSIAQKFCNNEFTRQYTPTSGI 47
>gi|356500461|ref|XP_003519050.1| PREDICTED: ras-related protein RABA4d-like [Glycine max]
Length = 222
Score = 38.5 bits (88), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 24/34 (70%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
VV+VG+ AVGK+ ++ R+ + F D K TIGV+
Sbjct: 18 VVLVGDSAVGKTQLLARFAKNQFNVDSKATIGVE 51
>gi|350412962|ref|XP_003489831.1| PREDICTED: ras-related protein Rab-28-like [Bombus impatiens]
Length = 239
Score = 38.5 bits (88), Expect = 0.57, Method: Composition-based stats.
Identities = 15/36 (41%), Positives = 23/36 (63%)
Query: 12 KGTVVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
K +V+VG+ GK+S+ Q++C FTR Y T G+
Sbjct: 12 KLKIVLVGDSGSGKTSIAQKFCNNEFTRQYTPTSGI 47
>gi|167384673|ref|XP_001737050.1| hypothetical protein [Entamoeba dispar SAW760]
gi|165900326|gb|EDR26670.1| hypothetical protein, conserved [Entamoeba dispar SAW760]
Length = 195
Score = 38.5 bits (88), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 24/33 (72%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
++++G +VGK+S+++RYC G F + T+G+
Sbjct: 11 ILMIGESSVGKTSLVKRYCEGIFLEEMMSTVGI 43
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.325 0.139 0.419
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 992,644,698
Number of Sequences: 23463169
Number of extensions: 28905660
Number of successful extensions: 160745
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 4265
Number of HSP's successfully gapped in prelim test: 36
Number of HSP's that attempted gapping in prelim test: 153338
Number of HSP's gapped (non-prelim): 7415
length of query: 71
length of database: 8,064,228,071
effective HSP length: 43
effective length of query: 28
effective length of database: 7,055,311,804
effective search space: 197548730512
effective search space used: 197548730512
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 69 (31.2 bits)