Your job contains 1 sequence.
>psy2514
MLNLWVLRGSIKGTVVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSMIQRYCRGTF
TRDYKKTIGAL
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy2514
(71 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|F1NTT5 - symbol:RAB23 "Uncharacterized protein"... 157 1.7e-11 1
ZFIN|ZDB-GENE-050522-328 - symbol:rab23 "RAB23, member RA... 157 1.7e-11 1
UNIPROTKB|E1BAI0 - symbol:RAB23 "Uncharacterized protein"... 154 3.5e-11 1
UNIPROTKB|E2QWS2 - symbol:RAB23 "Uncharacterized protein"... 154 3.5e-11 1
UNIPROTKB|Q9ULC3 - symbol:RAB23 "Ras-related protein Rab-... 154 3.5e-11 1
UNIPROTKB|F1RZV2 - symbol:RAB23 "Uncharacterized protein"... 154 3.5e-11 1
MGI|MGI:99833 - symbol:Rab23 "RAB23, member RAS oncogene ... 154 3.5e-11 1
RGD|1306867 - symbol:Rab23 "RAB23, member RAS oncogene fa... 154 3.5e-11 1
FB|FBgn0037364 - symbol:Rab23 "Rab23" species:7227 "Droso... 154 6.3e-11 1
UNIPROTKB|H7C0Z1 - symbol:RAB36 "Ras-related protein Rab-... 109 2.1e-06 1
UNIPROTKB|F1RLS6 - symbol:RAB36 "Uncharacterized protein"... 110 5.9e-06 1
DICTYBASE|DDB_G0269416 - symbol:rab32B "Rab GTPase" speci... 109 7.0e-06 1
UNIPROTKB|E9PL56 - symbol:RAB7L1 "Ras-related protein Rab... 103 9.0e-06 1
UNIPROTKB|H7C0Y7 - symbol:RAB34 "Ras-related protein Rab-... 103 9.0e-06 1
UNIPROTKB|K7EIF2 - symbol:RAB34 "Ras-related protein Rab-... 103 9.0e-06 1
UNIPROTKB|F1PXG5 - symbol:RAB36 "Uncharacterized protein"... 109 9.2e-06 1
UNIPROTKB|F1NZZ1 - symbol:RAB36 "Uncharacterized protein"... 108 9.5e-06 1
UNIPROTKB|O95755 - symbol:RAB36 "Ras-related protein Rab-... 109 1.2e-05 1
UNIPROTKB|A5PJV4 - symbol:RAB7L1 "RAB7L1 protein" species... 103 1.7e-05 1
UNIPROTKB|O14966 - symbol:RAB7L1 "Ras-related protein Rab... 103 1.7e-05 1
UNIPROTKB|I3LHE8 - symbol:RAB7L1 "Uncharacterized protein... 103 1.7e-05 1
MGI|MGI:2385107 - symbol:Rab7l1 "RAB7, member RAS oncogen... 103 1.7e-05 1
RGD|620892 - symbol:Rab7l1 "RAB7, member RAS oncogene fam... 103 1.7e-05 1
UNIPROTKB|C9JBG0 - symbol:RAB34 "Ras-related protein Rab-... 103 1.9e-05 1
UNIPROTKB|I3LPH3 - symbol:I3LPH3 "Uncharacterized protein... 103 1.9e-05 1
RGD|1596098 - symbol:Rab36 "RAB36, member RAS oncogene fa... 105 2.0e-05 1
UNIPROTKB|F1N9R7 - symbol:RAB7L1 "Uncharacterized protein... 101 2.5e-05 1
UNIPROTKB|E1BJ06 - symbol:E1BJ06 "Uncharacterized protein... 105 2.6e-05 1
UNIPROTKB|G3N0B5 - symbol:G3N0B5 "Uncharacterized protein... 103 3.2e-05 1
UNIPROTKB|F1PDF1 - symbol:RAB34 "Uncharacterized protein"... 103 3.2e-05 1
UNIPROTKB|C9JY26 - symbol:RAB34 "Ras-related protein Rab-... 103 3.2e-05 1
UNIPROTKB|Q9BZG1 - symbol:RAB34 "Ras-related protein Rab-... 103 3.2e-05 1
UNIPROTKB|Q06AU4 - symbol:RAB34 "Ras-related protein Rab-... 103 3.2e-05 1
MGI|MGI:104606 - symbol:Rab34 "RAB34, member of RAS oncog... 103 3.2e-05 1
RGD|1305058 - symbol:Rab34 "RAB34, member RAS oncogene fa... 103 3.2e-05 1
UNIPROTKB|A8MYQ9 - symbol:RAB34 "Ras-related protein Rab-... 103 3.2e-05 1
UNIPROTKB|E7ES60 - symbol:RAB34 "Uncharacterized protein"... 103 3.4e-05 1
UNIPROTKB|J3KQW8 - symbol:RAB34 "Ras-related protein Rab-... 103 4.7e-05 1
UNIPROTKB|F1P9G2 - symbol:RAB7L1 "Uncharacterized protein... 100 5.0e-05 1
ZFIN|ZDB-GENE-041010-197 - symbol:rab34a "RAB34, member R... 101 5.4e-05 1
MGI|MGI:1924127 - symbol:Rab36 "RAB36, member RAS oncogen... 100 7.3e-05 1
UNIPROTKB|F1S747 - symbol:RAB32 "Ras-related protein Rab-... 81 7.6e-05 2
UNIPROTKB|Q06AU5 - symbol:RAB32 "Ras-related protein Rab-... 81 7.6e-05 2
ZFIN|ZDB-GENE-040910-5 - symbol:rab36 "RAB36, member RAS ... 99 9.1e-05 1
DICTYBASE|DDB_G0275675 - symbol:rab32C "Rab GTPase" speci... 95 0.00018 1
DICTYBASE|DDB_G0283603 - symbol:rab32A "Rab GTPase" speci... 78 0.00019 2
ZFIN|ZDB-GENE-040724-117 - symbol:rab44 "RAB44, member RA... 106 0.00023 1
UNIPROTKB|F1NIP1 - symbol:F1NIP1 "Uncharacterized protein... 91 0.00025 1
UNIPROTKB|F1PIU7 - symbol:RHOF "Uncharacterized protein" ... 78 0.00030 2
TAIR|locus:2171790 - symbol:RABA4a "RAB GTPase homolog A4... 93 0.00031 1
ZFIN|ZDB-GENE-091118-61 - symbol:rab34b "RAB34, member RA... 93 0.00041 1
TAIR|locus:2041036 - symbol:ARA4 species:3702 "Arabidopsi... 91 0.00045 1
TAIR|locus:2065858 - symbol:RABA5d "RAB GTPase homolog A5... 91 0.00048 1
DICTYBASE|DDB_G0277101 - symbol:rab11C "Rab GTPase" speci... 91 0.00050 1
TAIR|locus:2140079 - symbol:RABA4B "RAB GTPase homolog A4... 91 0.00050 1
FB|FBgn0036497 - symbol:Ran-like "Ran-like" species:7227 ... 90 0.00061 1
UNIPROTKB|Q6IMM1 - symbol:DNAJC27 "DnaJ homolog subfamily... 90 0.00097 1
>UNIPROTKB|F1NTT5 [details] [associations]
symbol:RAB23 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0008589 "regulation of
smoothened signaling pathway" evidence=IEA] [GO:0021513 "spinal
cord dorsal/ventral patterning" evidence=IEA] [GO:0042733
"embryonic digit morphogenesis" evidence=IEA] [GO:0045861 "negative
regulation of proteolysis" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0015031 GO:GO:0045861 GO:GO:0008589
GeneTree:ENSGT00700000104457 OMA:VTEVFKY EMBL:AADN02002690
IPI:IPI00597769 Ensembl:ENSGALT00000026245 Uniprot:F1NTT5
Length = 237
Score = 157 (60.3 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 29/33 (87%), Positives = 32/33 (96%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
VV+VGNGAVGKSSMIQRYC+G FT+DYKKTIGV
Sbjct: 12 VVVVGNGAVGKSSMIQRYCKGIFTKDYKKTIGV 44
Score = 106 (42.4 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 19/22 (86%), Positives = 21/22 (95%)
Query: 48 KSSMIQRYCRGTFTRDYKKTIG 69
KSSMIQRYC+G FT+DYKKTIG
Sbjct: 22 KSSMIQRYCKGIFTKDYKKTIG 43
>ZFIN|ZDB-GENE-050522-328 [details] [associations]
symbol:rab23 "RAB23, member RAS oncogene family"
species:7955 "Danio rerio" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 ZFIN:ZDB-GENE-050522-328 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 CTD:51715
HOVERGEN:HBG100144 KO:K06234 EMBL:BC095213 IPI:IPI00512473
RefSeq:NP_001018579.1 UniGene:Dr.39367 ProteinModelPortal:Q503R5
SMR:Q503R5 GeneID:553778 KEGG:dre:553778 InParanoid:Q503R5
NextBio:20880499 Uniprot:Q503R5
Length = 237
Score = 157 (60.3 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 29/33 (87%), Positives = 32/33 (96%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
VV+VGNGAVGKSSMIQRYC+G FT+DYKKTIGV
Sbjct: 12 VVVVGNGAVGKSSMIQRYCKGIFTKDYKKTIGV 44
Score = 106 (42.4 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 19/22 (86%), Positives = 21/22 (95%)
Query: 48 KSSMIQRYCRGTFTRDYKKTIG 69
KSSMIQRYC+G FT+DYKKTIG
Sbjct: 22 KSSMIQRYCKGIFTKDYKKTIG 43
>UNIPROTKB|E1BAI0 [details] [associations]
symbol:RAB23 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045861 "negative regulation of proteolysis"
evidence=IEA] [GO:0042733 "embryonic digit morphogenesis"
evidence=IEA] [GO:0021513 "spinal cord dorsal/ventral patterning"
evidence=IEA] [GO:0008589 "regulation of smoothened signaling
pathway" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 GO:GO:0045861
GO:GO:0042733 GO:GO:0008589 GeneTree:ENSGT00700000104457 CTD:51715
KO:K06234 OMA:VTEVFKY GO:GO:0021513 EMBL:DAAA02054803
EMBL:DAAA02054804 IPI:IPI00696030 RefSeq:NP_001193835.1
UniGene:Bt.62609 Ensembl:ENSBTAT00000007050 GeneID:618588
KEGG:bta:618588 NextBio:20901259 Uniprot:E1BAI0
Length = 237
Score = 154 (59.3 bits), Expect = 3.5e-11, P = 3.5e-11
Identities = 28/33 (84%), Positives = 32/33 (96%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
+V+VGNGAVGKSSMIQRYC+G FT+DYKKTIGV
Sbjct: 12 MVVVGNGAVGKSSMIQRYCKGIFTKDYKKTIGV 44
Score = 106 (42.4 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 19/22 (86%), Positives = 21/22 (95%)
Query: 48 KSSMIQRYCRGTFTRDYKKTIG 69
KSSMIQRYC+G FT+DYKKTIG
Sbjct: 22 KSSMIQRYCKGIFTKDYKKTIG 43
>UNIPROTKB|E2QWS2 [details] [associations]
symbol:RAB23 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GeneTree:ENSGT00700000104457 CTD:51715 KO:K06234 OMA:VTEVFKY
EMBL:AAEX03008410 RefSeq:XP_538975.2 Ensembl:ENSCAFT00000003875
GeneID:481854 KEGG:cfa:481854 Uniprot:E2QWS2
Length = 237
Score = 154 (59.3 bits), Expect = 3.5e-11, P = 3.5e-11
Identities = 28/33 (84%), Positives = 32/33 (96%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
+V+VGNGAVGKSSMIQRYC+G FT+DYKKTIGV
Sbjct: 12 MVVVGNGAVGKSSMIQRYCKGIFTKDYKKTIGV 44
Score = 106 (42.4 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 19/22 (86%), Positives = 21/22 (95%)
Query: 48 KSSMIQRYCRGTFTRDYKKTIG 69
KSSMIQRYC+G FT+DYKKTIG
Sbjct: 22 KSSMIQRYCKGIFTKDYKKTIG 43
>UNIPROTKB|Q9ULC3 [details] [associations]
symbol:RAB23 "Ras-related protein Rab-23" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0008589
"regulation of smoothened signaling pathway" evidence=IEA]
[GO:0021513 "spinal cord dorsal/ventral patterning" evidence=IEA]
[GO:0042733 "embryonic digit morphogenesis" evidence=IEA]
[GO:0045861 "negative regulation of proteolysis" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0010008 "endosome
membrane" evidence=IEA] [GO:0030670 "phagocytic vesicle membrane"
evidence=IEA] [GO:0005776 "autophagic vacuole" evidence=IDA]
[GO:0000045 "autophagic vacuole assembly" evidence=IMP] [GO:0006968
"cellular defense response" evidence=IMP] [GO:0003924 "GTPase
activity" evidence=IDA] [GO:0006184 "GTP catabolic process"
evidence=IDA] [GO:0042992 "negative regulation of transcription
factor import into nucleus" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0097094 "craniofacial suture morphogenesis"
evidence=IMP] [GO:0045335 "phagocytic vesicle" evidence=IDA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264 EMBL:CH471081
GO:GO:0015031 GO:GO:0003924 GO:GO:0005776 GO:GO:0000045
GO:GO:0045861 GO:GO:0006968 PROSITE:PS51419
Pathway_Interaction_DB:hedgehog_glipathway GO:GO:0042733
eggNOG:COG1100 EMBL:AL031321 GO:GO:0008589 GO:GO:0042992
GO:GO:0097094 HOGENOM:HOG000233968 EMBL:AB034244 EMBL:AB025427
EMBL:AF161486 EMBL:AF498951 EMBL:AK313796 EMBL:AY585189
EMBL:CR749371 EMBL:BC015021 IPI:IPI00008034 RefSeq:NP_057361.3
RefSeq:NP_899050.1 UniGene:Hs.555016 ProteinModelPortal:Q9ULC3
SMR:Q9ULC3 IntAct:Q9ULC3 STRING:Q9ULC3 PhosphoSite:Q9ULC3
DMDM:12643897 PaxDb:Q9ULC3 PRIDE:Q9ULC3 DNASU:51715
Ensembl:ENST00000317483 Ensembl:ENST00000468148 GeneID:51715
KEGG:hsa:51715 UCSC:uc003pds.3 CTD:51715 GeneCards:GC06M057100
HGNC:HGNC:14263 HPA:HPA029135 HPA:HPA029136 MIM:201000 MIM:606144
neXtProt:NX_Q9ULC3 Orphanet:65759 PharmGKB:PA34113
HOVERGEN:HBG100144 InParanoid:Q9ULC3 KO:K06234 OMA:VTEVFKY
OrthoDB:EOG4P2Q33 PhylomeDB:Q9ULC3 GenomeRNAi:51715 NextBio:55759
Bgee:Q9ULC3 CleanEx:HS_RAB23 Genevestigator:Q9ULC3
GermOnline:ENSG00000112210 GO:GO:0021513 Uniprot:Q9ULC3
Length = 237
Score = 154 (59.3 bits), Expect = 3.5e-11, P = 3.5e-11
Identities = 28/33 (84%), Positives = 32/33 (96%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
+V+VGNGAVGKSSMIQRYC+G FT+DYKKTIGV
Sbjct: 12 MVVVGNGAVGKSSMIQRYCKGIFTKDYKKTIGV 44
Score = 106 (42.4 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 19/22 (86%), Positives = 21/22 (95%)
Query: 48 KSSMIQRYCRGTFTRDYKKTIG 69
KSSMIQRYC+G FT+DYKKTIG
Sbjct: 22 KSSMIQRYCKGIFTKDYKKTIG 43
>UNIPROTKB|F1RZV2 [details] [associations]
symbol:RAB23 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045861 "negative regulation of proteolysis"
evidence=IEA] [GO:0042733 "embryonic digit morphogenesis"
evidence=IEA] [GO:0021513 "spinal cord dorsal/ventral patterning"
evidence=IEA] [GO:0008589 "regulation of smoothened signaling
pathway" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 GO:GO:0045861
GO:GO:0042733 GO:GO:0008589 GeneTree:ENSGT00700000104457 KO:K06234
OMA:VTEVFKY GO:GO:0021513 EMBL:CT998546 EMBL:CT963091
RefSeq:XP_001929671.1 UniGene:Ssc.82033 Ensembl:ENSSSCT00000026804
GeneID:100155623 KEGG:ssc:100155623 Uniprot:F1RZV2
Length = 237
Score = 154 (59.3 bits), Expect = 3.5e-11, P = 3.5e-11
Identities = 28/33 (84%), Positives = 32/33 (96%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
+V+VGNGAVGKSSMIQRYC+G FT+DYKKTIGV
Sbjct: 12 MVVVGNGAVGKSSMIQRYCKGIFTKDYKKTIGV 44
Score = 106 (42.4 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 19/22 (86%), Positives = 21/22 (95%)
Query: 48 KSSMIQRYCRGTFTRDYKKTIG 69
KSSMIQRYC+G FT+DYKKTIG
Sbjct: 22 KSSMIQRYCKGIFTKDYKKTIG 43
>MGI|MGI:99833 [details] [associations]
symbol:Rab23 "RAB23, member RAS oncogene family" species:10090
"Mus musculus" [GO:0000045 "autophagic vacuole assembly"
evidence=ISO] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003924 "GTPase activity" evidence=ISO] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005776 "autophagic vacuole" evidence=ISO] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0006184 "GTP catabolic process"
evidence=ISO] [GO:0006810 "transport" evidence=IEA] [GO:0006968
"cellular defense response" evidence=ISO] [GO:0007165 "signal
transduction" evidence=IMP] [GO:0007264 "small GTPase mediated
signal transduction" evidence=IEA] [GO:0007399 "nervous system
development" evidence=IMP] [GO:0008589 "regulation of smoothened
signaling pathway" evidence=IGI] [GO:0015031 "protein transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0021513
"spinal cord dorsal/ventral patterning" evidence=IGI;IMP]
[GO:0042733 "embryonic digit morphogenesis" evidence=IMP]
[GO:0042992 "negative regulation of transcription factor import
into nucleus" evidence=ISO] [GO:0045335 "phagocytic vesicle"
evidence=ISO] [GO:0045861 "negative regulation of proteolysis"
evidence=IMP] [GO:0097094 "craniofacial suture morphogenesis"
evidence=ISO] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
MGI:MGI:99833 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886
GO:GO:0007165 GO:GO:0007264 GO:GO:0015031 GO:GO:0003924
GO:GO:0005776 GO:GO:0000045 GO:GO:0045861 GO:GO:0006968
GO:GO:0010008 GO:GO:0001843 PROSITE:PS51419 GO:GO:0042733
eggNOG:COG1100 GO:GO:0021904 GO:GO:0008589 GO:GO:0042992
GO:GO:0097094 HOGENOM:HOG000233968 HOVERGEN:HBG100144
OrthoDB:EOG4P2Q33 GO:GO:0021513 EMBL:Z22821 EMBL:BC025578
EMBL:M79305 IPI:IPI00116734 PIR:I48729 PIR:JH0645 UniGene:Mm.86744
PDB:1Z22 PDB:1Z2A PDBsum:1Z22 PDBsum:1Z2A ProteinModelPortal:P35288
SMR:P35288 STRING:P35288 PaxDb:P35288 PRIDE:P35288
InParanoid:P35288 EvolutionaryTrace:P35288 CleanEx:MM_RAB23
Genevestigator:P35288 GermOnline:ENSMUSG00000004768 Uniprot:P35288
Length = 237
Score = 154 (59.3 bits), Expect = 3.5e-11, P = 3.5e-11
Identities = 28/33 (84%), Positives = 32/33 (96%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
+V+VGNGAVGKSSMIQRYC+G FT+DYKKTIGV
Sbjct: 12 MVVVGNGAVGKSSMIQRYCKGIFTKDYKKTIGV 44
Score = 106 (42.4 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 19/22 (86%), Positives = 21/22 (95%)
Query: 48 KSSMIQRYCRGTFTRDYKKTIG 69
KSSMIQRYC+G FT+DYKKTIG
Sbjct: 22 KSSMIQRYCKGIFTKDYKKTIG 43
>RGD|1306867 [details] [associations]
symbol:Rab23 "RAB23, member RAS oncogene family" species:10116
"Rattus norvegicus" [GO:0000045 "autophagic vacuole assembly"
evidence=ISO] [GO:0003924 "GTPase activity" evidence=ISO]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005776 "autophagic vacuole" evidence=ISO]
[GO:0006184 "GTP catabolic process" evidence=ISO] [GO:0006968
"cellular defense response" evidence=ISO] [GO:0007165 "signal
transduction" evidence=ISO] [GO:0007264 "small GTPase mediated
signal transduction" evidence=IEA] [GO:0007399 "nervous system
development" evidence=ISO] [GO:0008589 "regulation of smoothened
signaling pathway" evidence=IEA;ISO] [GO:0015031 "protein
transport" evidence=IEA] [GO:0021513 "spinal cord dorsal/ventral
patterning" evidence=IEA;ISO] [GO:0042733 "embryonic digit
morphogenesis" evidence=IEA;ISO] [GO:0042992 "negative regulation
of transcription factor import into nucleus" evidence=ISO]
[GO:0045335 "phagocytic vesicle" evidence=ISO] [GO:0045861
"negative regulation of proteolysis" evidence=IEA;ISO] [GO:0097094
"craniofacial suture morphogenesis" evidence=ISO]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 RGD:1306867 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 GO:GO:0045861
GO:GO:0042733 GO:GO:0008589 EMBL:CH473965
GeneTree:ENSGT00700000104457 CTD:51715 KO:K06234 OMA:VTEVFKY
OrthoDB:EOG4P2Q33 GO:GO:0021513 IPI:IPI00193952
RefSeq:NP_001102475.1 UniGene:Rn.224887 Ensembl:ENSRNOT00000016933
GeneID:367242 KEGG:rno:367242 UCSC:RGD:1306867 NextBio:690945
Uniprot:D3ZRM5
Length = 237
Score = 154 (59.3 bits), Expect = 3.5e-11, P = 3.5e-11
Identities = 28/33 (84%), Positives = 32/33 (96%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
+V+VGNGAVGKSSMIQRYC+G FT+DYKKTIGV
Sbjct: 12 MVVVGNGAVGKSSMIQRYCKGIFTKDYKKTIGV 44
Score = 106 (42.4 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 19/22 (86%), Positives = 21/22 (95%)
Query: 48 KSSMIQRYCRGTFTRDYKKTIG 69
KSSMIQRYC+G FT+DYKKTIG
Sbjct: 22 KSSMIQRYCKGIFTKDYKKTIG 43
>FB|FBgn0037364 [details] [associations]
symbol:Rab23 "Rab23" species:7227 "Drosophila melanogaster"
[GO:0003924 "GTPase activity" evidence=ISS] [GO:0015031 "protein
transport" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0031982 "vesicle" evidence=ISS] [GO:0001738
"morphogenesis of a polarized epithelium" evidence=IMP] [GO:0007224
"smoothened signaling pathway" evidence=IMP] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 EMBL:AE014297 GO:GO:0005737 GO:GO:0007264
GO:GO:0015031 GO:GO:0001738 eggNOG:COG1100
GeneTree:ENSGT00700000104457 HSSP:P07560 CTD:51715 KO:K06234
EMBL:AY113574 RefSeq:NP_649574.1 UniGene:Dm.11663 SMR:Q9VNG6
IntAct:Q9VNG6 MINT:MINT-286009 EnsemblMetazoa:FBtr0078727
GeneID:40701 KEGG:dme:Dmel_CG2108 UCSC:CG2108-RA
FlyBase:FBgn0037364 InParanoid:Q9VNG6 OMA:RIMLWDT OrthoDB:EOG4TTF0X
GenomeRNAi:40701 NextBio:820138 Uniprot:Q9VNG6
Length = 268
Score = 154 (59.3 bits), Expect = 6.3e-11, P = 6.3e-11
Identities = 29/33 (87%), Positives = 31/33 (93%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
VVIVGNG VGKSSMIQRYC+G FT+DYKKTIGV
Sbjct: 40 VVIVGNGGVGKSSMIQRYCKGIFTKDYKKTIGV 72
Score = 107 (42.7 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 21/25 (84%), Positives = 23/25 (92%)
Query: 46 GV-KSSMIQRYCRGTFTRDYKKTIG 69
GV KSSMIQRYC+G FT+DYKKTIG
Sbjct: 47 GVGKSSMIQRYCKGIFTKDYKKTIG 71
>UNIPROTKB|H7C0Z1 [details] [associations]
symbol:RAB36 "Ras-related protein Rab-36" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
InterPro:IPR001806 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 HGNC:HGNC:9775
ChiTaRS:RAB36 EMBL:AC000029 EMBL:AC000102 ProteinModelPortal:H7C0Z1
PRIDE:H7C0Z1 Ensembl:ENST00000420895 Uniprot:H7C0Z1
Length = 132
Score = 109 (43.4 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 22/41 (53%), Positives = 30/41 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSMIQRY 55
VV+VG+ VGK+S+I R+C+ F RDYK TIGV I+R+
Sbjct: 21 VVVVGDLYVGKTSLIHRFCKNVFDRDYKATIGVDFE-IERF 60
>UNIPROTKB|F1RLS6 [details] [associations]
symbol:RAB36 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005525 "GTP binding" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA]
InterPro:IPR001806 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GeneTree:ENSGT00600000084435 OMA:PEACLQF EMBL:CU571014
ProteinModelPortal:F1RLS6 Ensembl:ENSSSCT00000011009 Uniprot:F1RLS6
Length = 271
Score = 110 (43.8 bits), Expect = 5.9e-06, P = 5.9e-06
Identities = 22/41 (53%), Positives = 30/41 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSMIQRY 55
VV+VG+ VGK+S+I R+C+ F RDYK TIGV I+R+
Sbjct: 62 VVVVGDLYVGKTSLIHRFCKNVFNRDYKATIGVDFE-IERF 101
>DICTYBASE|DDB_G0269416 [details] [associations]
symbol:rab32B "Rab GTPase" species:44689
"Dictyostelium discoideum" [GO:0015031 "protein transport"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
dictyBase:DDB_G0269416 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0007264 EMBL:AAFI02000005 GenomeReviews:CM000150_GR
GO:GO:0015031 PROSITE:PS51419 eggNOG:COG1100 KO:K07976 HSSP:P51151
RefSeq:XP_645950.1 ProteinModelPortal:Q55E31
EnsemblProtists:DDB0229397 GeneID:8616894 KEGG:ddi:DDB_G0269416
OMA:CKENNFI Uniprot:Q55E31
Length = 260
Score = 109 (43.4 bits), Expect = 7.0e-06, P = 7.0e-06
Identities = 21/37 (56%), Positives = 30/37 (81%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSM 51
V+++G+ AVGKSS+I+RYC G F+ +YK TIGV S+
Sbjct: 62 VLLIGDYAVGKSSIIKRYCTGIFSPNYKLTIGVDFSV 98
>UNIPROTKB|E9PL56 [details] [associations]
symbol:RAB7L1 "Ras-related protein Rab-7L1" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
InterPro:IPR001806 Pfam:PF00071 PRINTS:PR00449 GO:GO:0005525
GO:GO:0007264 EMBL:AC119673 HGNC:HGNC:9789 ChiTaRS:RAB7L1
IPI:IPI00976350 ProteinModelPortal:E9PL56 SMR:E9PL56
Ensembl:ENST00000528078 ArrayExpress:E9PL56 Bgee:E9PL56
Uniprot:E9PL56
Length = 42
Score = 103 (41.3 bits), Expect = 9.0e-06, P = 9.0e-06
Identities = 17/33 (51%), Positives = 28/33 (84%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
V++VG+ AVGK+S++QRY + +F++ YK T+GV
Sbjct: 10 VLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGV 42
>UNIPROTKB|H7C0Y7 [details] [associations]
symbol:RAB34 "Ras-related protein Rab-34, isoform NARR"
species:9606 "Homo sapiens" [GO:0007264 "small GTPase mediated
signal transduction" evidence=IEA] [GO:0005525 "GTP binding"
evidence=IEA] InterPro:IPR001806 InterPro:IPR005225 Pfam:PF00071
PRINTS:PR00449 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
EMBL:AC010761 HGNC:HGNC:16519 ChiTaRS:RAB34
ProteinModelPortal:H7C0Y7 Ensembl:ENST00000422279 Uniprot:H7C0Y7
Length = 171
Score = 103 (41.3 bits), Expect = 9.0e-06, P = 9.0e-06
Identities = 19/41 (46%), Positives = 31/41 (75%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSMIQRY 55
V++VG+ +VGK+ +I R+C+ TF ++YK TIGV M +R+
Sbjct: 55 VIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDFEM-ERF 94
>UNIPROTKB|K7EIF2 [details] [associations]
symbol:RAB34 "Ras-related protein Rab-34, isoform NARR"
species:9606 "Homo sapiens" [GO:0007264 "small GTPase mediated
signal transduction" evidence=IEA] [GO:0005525 "GTP binding"
evidence=IEA] InterPro:IPR001806 InterPro:IPR005225 Pfam:PF00071
PRINTS:PR00449 TIGRFAMs:TIGR00231 EMBL:AC010761 HGNC:HGNC:16519
Ensembl:ENST00000419712 Uniprot:K7EIF2
Length = 149
Score = 103 (41.3 bits), Expect = 9.0e-06, P = 9.0e-06
Identities = 19/41 (46%), Positives = 31/41 (75%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSMIQRY 55
V++VG+ +VGK+ +I R+C+ TF ++YK TIGV M +R+
Sbjct: 55 VIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDFEM-ERF 94
>UNIPROTKB|F1PXG5 [details] [associations]
symbol:RAB36 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GeneTree:ENSGT00600000084435 OMA:PEACLQF EMBL:AAEX03014825
Ensembl:ENSCAFT00000021684 Uniprot:F1PXG5
Length = 295
Score = 109 (43.4 bits), Expect = 9.2e-06, P = 9.2e-06
Identities = 22/41 (53%), Positives = 30/41 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSMIQRY 55
VV+VG+ VGK+S+I R+C+ F RDYK TIGV I+R+
Sbjct: 88 VVVVGDLYVGKTSLIHRFCKNVFDRDYKATIGVDFE-IERF 127
>UNIPROTKB|F1NZZ1 [details] [associations]
symbol:RAB36 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0015031 GeneTree:ENSGT00600000084435 OMA:PEACLQF
EMBL:AC157663 IPI:IPI00574240 ProteinModelPortal:F1NZZ1
Ensembl:ENSGALT00000010853 Uniprot:F1NZZ1
Length = 267
Score = 108 (43.1 bits), Expect = 9.5e-06, P = 9.5e-06
Identities = 22/41 (53%), Positives = 30/41 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSMIQRY 55
VV+VG+ VGK+S+I R+C+ F RDYK TIGV I+R+
Sbjct: 60 VVVVGDVYVGKTSLIHRFCKDRFERDYKATIGVDFE-IERF 99
>UNIPROTKB|O95755 [details] [associations]
symbol:RAB36 "Ras-related protein Rab-36" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0000139 "Golgi
membrane" evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=TAS]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005794 GO:GO:0007264 GO:GO:0000139
GO:GO:0015031 PROSITE:PS51419 eggNOG:COG1100 HOGENOM:HOG000233970
HOVERGEN:HBG106693 EMBL:AB023061 EMBL:AF133588 EMBL:AY336745
EMBL:CR456553 EMBL:BC104989 EMBL:BC104991 IPI:IPI00032916
IPI:IPI00410116 RefSeq:NP_004905.2 UniGene:Hs.369557
ProteinModelPortal:O95755 SMR:O95755 STRING:O95755
PhosphoSite:O95755 REPRODUCTION-2DPAGE:O95755 PRIDE:O95755
DNASU:9609 Ensembl:ENST00000263116 Ensembl:ENST00000341989
GeneID:9609 KEGG:hsa:9609 UCSC:uc002zwv.1 UCSC:uc010gtw.1 CTD:9609
GeneCards:GC22P023487 H-InvDB:HIX0027922 HGNC:HGNC:9775 MIM:605662
neXtProt:NX_O95755 PharmGKB:PA34128 InParanoid:O95755 KO:K07922
OMA:PEACLQF OrthoDB:EOG49P9ZZ PhylomeDB:O95755 ChiTaRS:RAB36
GenomeRNAi:9609 NextBio:36047 ArrayExpress:O95755 Bgee:O95755
CleanEx:HS_RAB36 Genevestigator:O95755 Uniprot:O95755
Length = 333
Score = 109 (43.4 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 22/41 (53%), Positives = 30/41 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSMIQRY 55
VV+VG+ VGK+S+I R+C+ F RDYK TIGV I+R+
Sbjct: 126 VVVVGDLYVGKTSLIHRFCKNVFDRDYKATIGVDFE-IERF 165
>UNIPROTKB|A5PJV4 [details] [associations]
symbol:RAB7L1 "RAB7L1 protein" species:9913 "Bos taurus"
[GO:0005525 "GTP binding" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
eggNOG:COG1100 HOVERGEN:HBG009351 HOGENOM:HOG000233968
GeneTree:ENSGT00700000104228 CTD:8934 KO:K07916 OMA:GQERFIS
OrthoDB:EOG4SN1PN EMBL:DAAA02041949 EMBL:BC142252 IPI:IPI00712290
RefSeq:NP_001092564.1 UniGene:Bt.28513 Ensembl:ENSBTAT00000004192
GeneID:539000 KEGG:bta:539000 InParanoid:A5PJV4 NextBio:20877717
Uniprot:A5PJV4
Length = 203
Score = 103 (41.3 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 17/33 (51%), Positives = 28/33 (84%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
V++VG+ AVGK+S++QRY + +F++ YK T+GV
Sbjct: 10 VLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGV 42
>UNIPROTKB|O14966 [details] [associations]
symbol:RAB7L1 "Ras-related protein Rab-7L1" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0003924 "GTPase activity" evidence=TAS]
[GO:0006184 "GTP catabolic process" evidence=TAS]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264 GO:GO:0015031
GO:GO:0003924 PROSITE:PS51419 eggNOG:COG1100 HOVERGEN:HBG009351
EMBL:AC119673 HOGENOM:HOG000233968 EMBL:D84488 EMBL:AK308359
EMBL:AK303879 EMBL:BC002585 IPI:IPI00024775 IPI:IPI00909756
IPI:IPI00913930 RefSeq:NP_001129134.1 RefSeq:NP_001129135.1
RefSeq:NP_001129136.1 RefSeq:NP_003920.1 UniGene:Hs.115325
ProteinModelPortal:O14966 SMR:O14966 DIP:DIP-31215N IntAct:O14966
STRING:O14966 PhosphoSite:O14966 PaxDb:O14966 PRIDE:O14966
DNASU:8934 Ensembl:ENST00000235932 Ensembl:ENST00000367139
Ensembl:ENST00000414729 Ensembl:ENST00000437324
Ensembl:ENST00000446390 GeneID:8934 KEGG:hsa:8934 UCSC:uc001hde.4
CTD:8934 GeneCards:GC01M205738 HGNC:HGNC:9789 HPA:CAB020822
HPA:HPA026303 MIM:603949 neXtProt:NX_O14966 PharmGKB:PA34151
InParanoid:O14966 KO:K07916 OMA:GQERFIS OrthoDB:EOG4SN1PN
PhylomeDB:O14966 ChiTaRS:RAB7L1 GenomeRNAi:8934 NextBio:33592
ArrayExpress:O14966 Bgee:O14966 CleanEx:HS_RAB7L1
Genevestigator:O14966 GermOnline:ENSG00000117280 Uniprot:O14966
Length = 203
Score = 103 (41.3 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 17/33 (51%), Positives = 28/33 (84%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
V++VG+ AVGK+S++QRY + +F++ YK T+GV
Sbjct: 10 VLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGV 42
>UNIPROTKB|I3LHE8 [details] [associations]
symbol:RAB7L1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005525 "GTP binding" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0015031 GeneTree:ENSGT00700000104228 KO:K07916 OMA:GQERFIS
EMBL:FP565441 RefSeq:XP_003357447.1 RefSeq:XP_003357448.1
RefSeq:XP_003357449.1 Ensembl:ENSSSCT00000028022 GeneID:100626414
KEGG:ssc:100626414 Uniprot:I3LHE8
Length = 203
Score = 103 (41.3 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 17/33 (51%), Positives = 28/33 (84%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
V++VG+ AVGK+S++QRY + +F++ YK T+GV
Sbjct: 10 VLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGV 42
>MGI|MGI:2385107 [details] [associations]
symbol:Rab7l1 "RAB7, member RAS oncogene family-like 1"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0007264
"small GTPase mediated signal transduction" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0015031 "protein
transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 MGI:MGI:2385107
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264
GO:GO:0015031 PROSITE:PS51419 eggNOG:COG1100 HOVERGEN:HBG009351
HOGENOM:HOG000233968 OrthoDB:EOG4SN1PN EMBL:BC016133 EMBL:BC029056
IPI:IPI00130361 UniGene:Mm.34027 ProteinModelPortal:Q91YQ1
SMR:Q91YQ1 STRING:Q91YQ1 PhosphoSite:Q91YQ1 PaxDb:Q91YQ1
PRIDE:Q91YQ1 InParanoid:Q91YQ1 CleanEx:MM_RAB7L1
Genevestigator:Q91YQ1 GermOnline:ENSMUSG00000026433 Uniprot:Q91YQ1
Length = 204
Score = 103 (41.3 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 17/33 (51%), Positives = 28/33 (84%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
V++VG+ AVGK+S++QRY + +F++ YK T+GV
Sbjct: 10 VLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGV 42
>RGD|620892 [details] [associations]
symbol:Rab7l1 "RAB7, member RAS oncogene family-like 1"
species:10116 "Rattus norvegicus" [GO:0003924 "GTPase activity"
evidence=TAS] [GO:0005525 "GTP binding" evidence=TAS] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0006184 "GTP catabolic process"
evidence=TAS] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
RGD:620892 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886
GO:GO:0007264 GO:GO:0015031 GO:GO:0003924 PROSITE:PS51419
HOVERGEN:HBG009351 HSSP:P51151 CTD:8934 KO:K07916 EMBL:X96663
IPI:IPI00209145 RefSeq:NP_598274.1 UniGene:Rn.4323
ProteinModelPortal:Q63481 GeneID:171122 KEGG:rno:171122
NextBio:621866 Genevestigator:Q63481 Uniprot:Q63481
Length = 204
Score = 103 (41.3 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 17/33 (51%), Positives = 28/33 (84%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
V++VG+ AVGK+S++QRY + +F++ YK T+GV
Sbjct: 10 VLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGV 42
>UNIPROTKB|C9JBG0 [details] [associations]
symbol:RAB34 "Ras-related protein Rab-34, isoform NARR"
species:9606 "Homo sapiens" [GO:0007264 "small GTPase mediated
signal transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0001726
"ruffle" evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0005769 "early endosome" evidence=IEA] [GO:0006897
"endocytosis" evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GO:GO:0003924 GO:GO:0006897 GO:GO:0001726 GO:GO:0005769
EMBL:AC010761 HGNC:HGNC:16519 ChiTaRS:RAB34 HOGENOM:HOG000233970
IPI:IPI00796900 SMR:C9JBG0 STRING:C9JBG0 Ensembl:ENST00000353676
Ensembl:ENST00000412625 Uniprot:C9JBG0
Length = 211
Score = 103 (41.3 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 19/41 (46%), Positives = 31/41 (75%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSMIQRY 55
V++VG+ +VGK+ +I R+C+ TF ++YK TIGV M +R+
Sbjct: 55 VIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDFEM-ERF 94
>UNIPROTKB|I3LPH3 [details] [associations]
symbol:I3LPH3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005525 "GTP binding" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA]
InterPro:IPR001806 Pfam:PF00071 PRINTS:PR00449 GO:GO:0005525
GO:GO:0007264 GeneTree:ENSGT00600000084435
Ensembl:ENSSSCT00000024729 OMA:TNARRIG Uniprot:I3LPH3
Length = 212
Score = 103 (41.3 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 19/41 (46%), Positives = 31/41 (75%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSMIQRY 55
V++VG+ +VGK+ +I R+C+ TF ++YK TIGV M +R+
Sbjct: 55 VIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDFEM-ERF 94
>RGD|1596098 [details] [associations]
symbol:Rab36 "RAB36, member RAS oncogene family" species:10116
"Rattus norvegicus" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 RGD:1596098 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 eggNOG:COG1100
EMBL:CH473988 HOGENOM:HOG000233970 HOVERGEN:HBG106693
GeneTree:ENSGT00600000084435 CTD:9609 KO:K07922 OMA:PEACLQF
OrthoDB:EOG49P9ZZ EMBL:BC167029 IPI:IPI00372847
RefSeq:NP_001103059.1 UniGene:Rn.210110 Ensembl:ENSRNOT00000001772
GeneID:690407 KEGG:rno:690407 UCSC:RGD:1596098 NextBio:740851
Genevestigator:B2RZ53 Uniprot:B2RZ53
Length = 267
Score = 105 (42.0 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 22/41 (53%), Positives = 29/41 (70%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSMIQRY 55
VV+VG+ VGK+S+I R C+ F RDYK TIGV I+R+
Sbjct: 60 VVVVGDLYVGKTSLIHRLCKNVFDRDYKATIGVDFE-IERF 99
>UNIPROTKB|F1N9R7 [details] [associations]
symbol:RAB7L1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GeneTree:ENSGT00700000104228 OMA:GQERFIS EMBL:AADN02044935
IPI:IPI00603890 ProteinModelPortal:F1N9R7
Ensembl:ENSGALT00000001008 Uniprot:F1N9R7
Length = 193
Score = 101 (40.6 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 17/33 (51%), Positives = 25/33 (75%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
V++VG+ VGK+S++QRY +F R YK T+GV
Sbjct: 24 VLVVGDATVGKTSLVQRYANDSFNRHYKSTVGV 56
>UNIPROTKB|E1BJ06 [details] [associations]
symbol:E1BJ06 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005525 "GTP binding" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0015031 GeneTree:ENSGT00600000084435 OMA:PEACLQF
EMBL:DAAA02045705 IPI:IPI00724242 ProteinModelPortal:E1BJ06
Ensembl:ENSBTAT00000017437 Uniprot:E1BJ06
Length = 302
Score = 105 (42.0 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 26/57 (45%), Positives = 35/57 (61%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSMIQRY-CRGT-FTRDYKKTIG 69
VV+VG+ VGK+S+I R+C+ F DYK TIGV I+R+ GT F+ T G
Sbjct: 95 VVVVGDLYVGKTSLIHRFCKNVFDHDYKATIGVDFE-IERFEVAGTPFSLQIWDTAG 150
>UNIPROTKB|G3N0B5 [details] [associations]
symbol:G3N0B5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0006897 "endocytosis" evidence=IEA] [GO:0005769 "early
endosome" evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0001726 "ruffle" evidence=IEA] [GO:0005525 "GTP binding"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] InterPro:IPR001806 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0007264 GO:GO:0003924 GO:GO:0006897 GO:GO:0001726
GO:GO:0005769 GeneTree:ENSGT00600000084435 EMBL:DAAA02048605
EMBL:DAAA02048604 ProteinModelPortal:G3N0B5
Ensembl:ENSBTAT00000065092 Uniprot:G3N0B5
Length = 258
Score = 103 (41.3 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 19/41 (46%), Positives = 31/41 (75%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSMIQRY 55
V++VG+ +VGK+ +I R+C+ TF ++YK TIGV M +R+
Sbjct: 55 VIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDFEM-ERF 94
>UNIPROTKB|F1PDF1 [details] [associations]
symbol:RAB34 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006897 "endocytosis" evidence=IEA]
[GO:0005769 "early endosome" evidence=IEA] [GO:0003924 "GTPase
activity" evidence=IEA] [GO:0001726 "ruffle" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GO:GO:0003924 GO:GO:0006897 GO:GO:0001726 GO:GO:0005769 CTD:83871
KO:K07921 GeneTree:ENSGT00600000084435 OMA:ACQEQRT
EMBL:AAEX03006669 RefSeq:XP_868242.1 Ensembl:ENSCAFT00000036036
GeneID:612952 KEGG:cfa:612952 Uniprot:F1PDF1
Length = 259
Score = 103 (41.3 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 19/41 (46%), Positives = 31/41 (75%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSMIQRY 55
V++VG+ +VGK+ +I R+C+ TF ++YK TIGV M +R+
Sbjct: 55 VIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDFEM-ERF 94
>UNIPROTKB|C9JY26 [details] [associations]
symbol:RAB34 "Ras-related protein Rab-34, isoform NARR"
species:9606 "Homo sapiens" [GO:0007264 "small GTPase mediated
signal transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 EMBL:AC010761
UniGene:Hs.301853 HGNC:HGNC:16519 ChiTaRS:RAB34
RefSeq:NP_001243207.1 GeneID:83871 KEGG:hsa:83871 CTD:83871
HOGENOM:HOG000233970 KO:K07921 IPI:IPI00927142 STRING:C9JY26
Ensembl:ENST00000430132 ArrayExpress:C9JY26 Uniprot:C9JY26
Length = 259
Score = 103 (41.3 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 19/41 (46%), Positives = 31/41 (75%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSMIQRY 55
V++VG+ +VGK+ +I R+C+ TF ++YK TIGV M +R+
Sbjct: 55 VIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDFEM-ERF 94
>UNIPROTKB|Q9BZG1 [details] [associations]
symbol:RAB34 "Ras-related protein Rab-34" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0005794 "Golgi
apparatus" evidence=IEA] [GO:0030670 "phagocytic vesicle membrane"
evidence=IEA] [GO:0045335 "phagocytic vesicle" evidence=IDA]
[GO:0090385 "phagosome-lysosome fusion" evidence=IMP] [GO:0090382
"phagosome maturation" evidence=IMP] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005794
GO:GO:0007264 GO:GO:0015031 GO:GO:0003924 GO:GO:0006897
GO:GO:0001726 PROSITE:PS51419 GO:GO:0005769 eggNOG:COG1100
EMBL:AC010761 UniGene:Hs.301853 GeneCards:GC17M027041
HGNC:HGNC:16519 ChiTaRS:RAB34 EMBL:AF322067 EMBL:AJ277106
EMBL:BT006702 EMBL:AK027312 EMBL:AK074689 EMBL:AK304633
EMBL:BC016841 EMBL:BC091510 IPI:IPI00328180 IPI:IPI00410673
IPI:IPI00908406 RefSeq:NP_001138414.1 RefSeq:NP_001243205.1
RefSeq:NP_001243206.1 RefSeq:NP_001243207.1 RefSeq:NP_114140.4
ProteinModelPortal:Q9BZG1 SMR:Q9BZG1 IntAct:Q9BZG1 STRING:Q9BZG1
PhosphoSite:Q9BZG1 DMDM:20139693 PaxDb:Q9BZG1 PRIDE:Q9BZG1
DNASU:83871 Ensembl:ENST00000301043 Ensembl:ENST00000395243
Ensembl:ENST00000395245 Ensembl:ENST00000415040
Ensembl:ENST00000450529 GeneID:83871 KEGG:hsa:83871 UCSC:uc002hce.2
UCSC:uc002hcg.2 CTD:83871 HPA:HPA021366 MIM:610917
neXtProt:NX_Q9BZG1 PharmGKB:PA34126 HOGENOM:HOG000233970
HOVERGEN:HBG106693 InParanoid:Q9BZG1 KO:K07921 OrthoDB:EOG41NTMP
PhylomeDB:Q9BZG1 GenomeRNAi:83871 NextBio:72895 ArrayExpress:Q9BZG1
Bgee:Q9BZG1 CleanEx:HS_RAB34 CleanEx:HS_RAB39 Genevestigator:Q9BZG1
GermOnline:ENSG00000109113 Uniprot:Q9BZG1
Length = 259
Score = 103 (41.3 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 19/41 (46%), Positives = 31/41 (75%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSMIQRY 55
V++VG+ +VGK+ +I R+C+ TF ++YK TIGV M +R+
Sbjct: 55 VIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDFEM-ERF 94
>UNIPROTKB|Q06AU4 [details] [associations]
symbol:RAB34 "Ras-related protein Rab-34" species:9823 "Sus
scrofa" [GO:0045335 "phagocytic vesicle" evidence=ISS] [GO:0090385
"phagosome-lysosome fusion" evidence=ISS] [GO:0090382 "phagosome
maturation" evidence=ISS] [GO:0030670 "phagocytic vesicle membrane"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005794 GO:GO:0007264
GO:GO:0015031 PROSITE:PS51419 eggNOG:COG1100 CTD:83871
HOGENOM:HOG000233970 HOVERGEN:HBG106693 KO:K07921 OrthoDB:EOG41NTMP
EMBL:DQ917631 RefSeq:NP_001116650.1 UniGene:Ssc.54809
ProteinModelPortal:Q06AU4 Ensembl:ENSSSCT00000019341
GeneID:100144491 KEGG:ssc:100144491 GeneTree:ENSGT00600000084435
OMA:ACQEQRT Uniprot:Q06AU4
Length = 259
Score = 103 (41.3 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 19/41 (46%), Positives = 31/41 (75%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSMIQRY 55
V++VG+ +VGK+ +I R+C+ TF ++YK TIGV M +R+
Sbjct: 55 VIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDFEM-ERF 94
>MGI|MGI:104606 [details] [associations]
symbol:Rab34 "RAB34, member of RAS oncogene family"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0001726 "ruffle" evidence=IDA] [GO:0003924
"GTPase activity" evidence=IDA] [GO:0005525 "GTP binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005769
"early endosome" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0006184 "GTP catabolic process" evidence=IDA]
[GO:0006810 "transport" evidence=IEA] [GO:0006897 "endocytosis"
evidence=IDA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0019001 "guanyl nucleotide binding" evidence=IDA]
[GO:0045335 "phagocytic vesicle" evidence=ISO] [GO:0090382
"phagosome maturation" evidence=ISO] [GO:0090385
"phagosome-lysosome fusion" evidence=ISO] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 MGI:MGI:104606 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005794 GO:GO:0007264 GO:GO:0015031 GO:GO:0003924
GO:GO:0006897 GO:GO:0001726 PROSITE:PS51419 GO:GO:0005769
eggNOG:COG1100 CTD:83871 HOVERGEN:HBG106693 KO:K07921
OrthoDB:EOG41NTMP EMBL:AF322068 EMBL:AF327929 EMBL:AB082927
EMBL:BC038638 EMBL:S72304 IPI:IPI00130112 PIR:A41636
RefSeq:NP_001152954.1 RefSeq:NP_258436.2 UniGene:Mm.275864
ProteinModelPortal:Q64008 SMR:Q64008 STRING:Q64008
PhosphoSite:Q64008 PaxDb:Q64008 PRIDE:Q64008 GeneID:19376
KEGG:mmu:19376 NextBio:296471 CleanEx:MM_RAB34 CleanEx:MM_RAB39
Genevestigator:Q64008 GermOnline:ENSMUSG00000002059 GO:GO:0019001
Uniprot:Q64008
Length = 259
Score = 103 (41.3 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 19/41 (46%), Positives = 31/41 (75%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSMIQRY 55
V++VG+ +VGK+ +I R+C+ TF ++YK TIGV M +R+
Sbjct: 55 VIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDFEM-ERF 94
>RGD|1305058 [details] [associations]
symbol:Rab34 "RAB34, member RAS oncogene family" species:10116
"Rattus norvegicus" [GO:0001726 "ruffle" evidence=IEA;ISO]
[GO:0003924 "GTPase activity" evidence=IEA;ISO] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0005769 "early endosome"
evidence=IEA;ISO] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0006184 "GTP catabolic process" evidence=ISO] [GO:0006897
"endocytosis" evidence=ISO] [GO:0007264 "small GTPase mediated
signal transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0019001 "guanyl nucleotide binding" evidence=ISO]
[GO:0030670 "phagocytic vesicle membrane" evidence=IEA] [GO:0045335
"phagocytic vesicle" evidence=ISO;ISS] [GO:0090382 "phagosome
maturation" evidence=ISO;ISS] [GO:0090385 "phagosome-lysosome
fusion" evidence=ISO;ISS] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
RGD:1305058 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005794
GO:GO:0007264 GO:GO:0015031 GO:GO:0003924 GO:GO:0006897
GO:GO:0001726 PROSITE:PS51419 GO:GO:0005769 eggNOG:COG1100
CTD:83871 HOGENOM:HOG000233970 HOVERGEN:HBG106693 KO:K07921
OrthoDB:EOG41NTMP GeneTree:ENSGT00600000084435 OMA:ACQEQRT
EMBL:BC086400 IPI:IPI00372642 RefSeq:NP_001012140.1
UniGene:Rn.98493 HSSP:P62745 ProteinModelPortal:Q5U1Y1
IntAct:Q5U1Y1 STRING:Q5U1Y1 PRIDE:Q5U1Y1 Ensembl:ENSRNOT00000037016
GeneID:360571 KEGG:rno:360571 InParanoid:Q5U1Y1 NextBio:673257
Genevestigator:Q5U1Y1 Uniprot:Q5U1Y1
Length = 259
Score = 103 (41.3 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 19/41 (46%), Positives = 31/41 (75%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSMIQRY 55
V++VG+ +VGK+ +I R+C+ TF ++YK TIGV M +R+
Sbjct: 55 VIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDFEM-ERF 94
>UNIPROTKB|A8MYQ9 [details] [associations]
symbol:RAB34 "Ras-related protein Rab-34, isoform NARR"
species:9606 "Homo sapiens" [GO:0007264 "small GTPase mediated
signal transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 EMBL:AC010761
HGNC:HGNC:16519 ChiTaRS:RAB34 HOGENOM:HOG000233970
HOVERGEN:HBG106693 IPI:IPI00797402 ProteinModelPortal:A8MYQ9
SMR:A8MYQ9 STRING:A8MYQ9 Ensembl:ENST00000395242
ArrayExpress:A8MYQ9 Bgee:A8MYQ9 Uniprot:A8MYQ9
Length = 260
Score = 103 (41.3 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 19/41 (46%), Positives = 31/41 (75%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSMIQRY 55
V++VG+ +VGK+ +I R+C+ TF ++YK TIGV M +R+
Sbjct: 56 VIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDFEM-ERF 95
>UNIPROTKB|E7ES60 [details] [associations]
symbol:RAB34 "Uncharacterized protein" species:9606 "Homo
sapiens" [GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
InterPro:IPR001806 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 EMBL:AC010761
UniGene:Hs.301853 HGNC:HGNC:16519 ChiTaRS:RAB34 DNASU:83871
GeneID:83871 KEGG:hsa:83871 CTD:83871 KO:K07921 GenomeRNAi:83871
NextBio:72895 IPI:IPI00790959 RefSeq:NP_001136097.2 SMR:E7ES60
Ensembl:ENST00000453384 UCSC:uc010wav.1 Uniprot:E7ES60
Length = 268
Score = 103 (41.3 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 19/41 (46%), Positives = 31/41 (75%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSMIQRY 55
V++VG+ +VGK+ +I R+C+ TF ++YK TIGV M +R+
Sbjct: 113 VIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDFEM-ERF 152
>UNIPROTKB|J3KQW8 [details] [associations]
symbol:RAB34 "Ras-related protein Rab-34, isoform NARR"
species:9606 "Homo sapiens" [GO:0007264 "small GTPase mediated
signal transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0001726
"ruffle" evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0005769 "early endosome" evidence=IEA] [GO:0006897
"endocytosis" evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
EMBL:AC010761 UniGene:Hs.301853 HGNC:HGNC:16519 ChiTaRS:RAB34
GeneID:83871 KEGG:hsa:83871 CTD:83871 KO:K07921 OMA:ACQEQRT
RefSeq:NP_001138415.1 ProteinModelPortal:J3KQW8
Ensembl:ENST00000447716 Uniprot:J3KQW8
Length = 316
Score = 103 (41.3 bits), Expect = 4.7e-05, P = 4.7e-05
Identities = 19/41 (46%), Positives = 31/41 (75%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSMIQRY 55
V++VG+ +VGK+ +I R+C+ TF ++YK TIGV M +R+
Sbjct: 112 VIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDFEM-ERF 151
>UNIPROTKB|F1P9G2 [details] [associations]
symbol:RAB7L1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GeneTree:ENSGT00700000104228 OMA:GQERFIS EMBL:AAEX03018265
Ensembl:ENSCAFT00000016170 Uniprot:F1P9G2
Length = 225
Score = 100 (40.3 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 17/33 (51%), Positives = 27/33 (81%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
V++VG+ AVGK+S++QRY + +F + YK T+GV
Sbjct: 32 VLVVGDAAVGKTSLVQRYSQDSFQQHYKSTVGV 64
>ZFIN|ZDB-GENE-041010-197 [details] [associations]
symbol:rab34a "RAB34, member RAS oncogene family a"
species:7955 "Danio rerio" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 ZFIN:ZDB-GENE-041010-197 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 eggNOG:COG1100
HOGENOM:HOG000233970 HOVERGEN:HBG106693 KO:K07921 OrthoDB:EOG41NTMP
GeneTree:ENSGT00600000084435 OMA:ACQEQRT EMBL:CR855391
EMBL:BC083224 IPI:IPI00860763 RefSeq:NP_001006094.1
UniGene:Dr.77402 Ensembl:ENSDART00000004220 GeneID:450074
KEGG:dre:450074 CTD:450074 InParanoid:Q5XJS4 NextBio:20833053
Uniprot:Q5XJS4
Length = 260
Score = 101 (40.6 bits), Expect = 5.4e-05, P = 5.4e-05
Identities = 19/41 (46%), Positives = 30/41 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSMIQRY 55
V++VG+ AVGK+ +I R+C+ F ++YK TIGV M +R+
Sbjct: 56 VIVVGDLAVGKTCLINRFCKDVFDKNYKATIGVDFEM-ERF 95
>MGI|MGI:1924127 [details] [associations]
symbol:Rab36 "RAB36, member RAS oncogene family"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0007264
"small GTPase mediated signal transduction" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
MGI:MGI:1924127 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0000139 GO:GO:0015031 PROSITE:PS51419 eggNOG:COG1100
HOGENOM:HOG000233970 HOVERGEN:HBG106693
GeneTree:ENSGT00600000084435 CTD:9609 KO:K07922 OMA:PEACLQF
EMBL:AB232632 EMBL:AK038445 EMBL:AK046113 EMBL:AK142025
EMBL:BC119094 EMBL:BC119098 IPI:IPI00228122 RefSeq:NP_084057.1
UniGene:Mm.133593 HSSP:P35288 ProteinModelPortal:Q8CAM5 SMR:Q8CAM5
STRING:Q8CAM5 PhosphoSite:Q8CAM5 PaxDb:Q8CAM5 PRIDE:Q8CAM5
Ensembl:ENSMUST00000020391 Ensembl:ENSMUST00000146440
Ensembl:ENSMUST00000147802 GeneID:76877 KEGG:mmu:76877
UCSC:uc007fpx.1 InParanoid:Q8CAM5 NextBio:345985 Bgee:Q8CAM5
CleanEx:MM_RAB36 Genevestigator:Q8CAM5 Uniprot:Q8CAM5
Length = 267
Score = 100 (40.3 bits), Expect = 7.3e-05, P = 7.3e-05
Identities = 21/41 (51%), Positives = 28/41 (68%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSMIQRY 55
VV+VG+ VGK+S+I R C+ F DYK TIGV I+R+
Sbjct: 60 VVVVGDLYVGKTSLIHRLCKNVFDHDYKATIGVDFE-IERF 99
>UNIPROTKB|F1S747 [details] [associations]
symbol:RAB32 "Ras-related protein Rab-32" species:9823 "Sus
scrofa" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0007264
GO:GO:0015031 OMA:FCREGGF GeneTree:ENSGT00700000104228
EMBL:CU856012 Ensembl:ENSSSCT00000004552 Uniprot:F1S747
Length = 226
Score = 81 (33.6 bits), Expect = 7.6e-05, Sum P(2) = 7.6e-05
Identities = 15/33 (45%), Positives = 24/33 (72%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
V+++G VGK+S+I+RY F++ Y+ TIGV
Sbjct: 30 VLVIGELGVGKTSIIKRYVHQLFSQHYRATIGV 62
Score = 34 (17.0 bits), Expect = 7.6e-05, Sum P(2) = 7.6e-05
Identities = 8/15 (53%), Positives = 10/15 (66%)
Query: 58 GTFTRDY-KKTIGAL 71
G TR Y K+ +GAL
Sbjct: 91 GNMTRVYYKEAVGAL 105
>UNIPROTKB|Q06AU5 [details] [associations]
symbol:RAB32 "Ras-related protein Rab-32" species:9823 "Sus
scrofa" [GO:0045335 "phagocytic vesicle" evidence=ISS] [GO:0090382
"phagosome maturation" evidence=ISS] [GO:0030670 "phagocytic
vesicle membrane" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005739
GO:GO:0007264 GO:GO:0015031 PROSITE:PS51419 eggNOG:COG1100
HOVERGEN:HBG009351 HOGENOM:HOG000233968 CTD:10981 KO:K07918
OrthoDB:EOG4F7NM0 EMBL:DQ917630 RefSeq:NP_001116648.1
UniGene:Ssc.56282 ProteinModelPortal:Q06AU5 GeneID:100144496
KEGG:ssc:100144496 Uniprot:Q06AU5
Length = 226
Score = 81 (33.6 bits), Expect = 7.6e-05, Sum P(2) = 7.6e-05
Identities = 15/33 (45%), Positives = 24/33 (72%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
V+++G VGK+S+I+RY F++ Y+ TIGV
Sbjct: 30 VLVIGELGVGKTSIIKRYVHQLFSQHYRATIGV 62
Score = 34 (17.0 bits), Expect = 7.6e-05, Sum P(2) = 7.6e-05
Identities = 8/15 (53%), Positives = 10/15 (66%)
Query: 58 GTFTRDY-KKTIGAL 71
G TR Y K+ +GAL
Sbjct: 91 GNMTRVYYKEAVGAL 105
>ZFIN|ZDB-GENE-040910-5 [details] [associations]
symbol:rab36 "RAB36, member RAS oncogene family"
species:7955 "Danio rerio" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001806 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
ZFIN:ZDB-GENE-040910-5 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0007264 eggNOG:COG1100 HOGENOM:HOG000233970
HOVERGEN:HBG106693 GeneTree:ENSGT00600000084435 CTD:9609 KO:K07922
OMA:PEACLQF OrthoDB:EOG49P9ZZ EMBL:BX324123 EMBL:BC127570
IPI:IPI00484099 RefSeq:NP_001073128.1 UniGene:Dr.85210
Ensembl:ENSDART00000038577 GeneID:780839 KEGG:dre:780839
InParanoid:A0PJQ5 NextBio:20924506 Uniprot:A0PJQ5
Length = 262
Score = 99 (39.9 bits), Expect = 9.1e-05, P = 9.1e-05
Identities = 20/40 (50%), Positives = 28/40 (70%)
Query: 16 VIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVKSSMIQRY 55
V+VG+ VGK+ +I R+C+ F RDYK TIGV I+R+
Sbjct: 59 VVVGDLNVGKTCLINRFCKDVFERDYKATIGVDFE-IERF 97
>DICTYBASE|DDB_G0275675 [details] [associations]
symbol:rab32C "Rab GTPase" species:44689
"Dictyostelium discoideum" [GO:0015031 "protein transport"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
dictyBase:DDB_G0275675 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0007264 GO:GO:0015031 GenomeReviews:CM000151_GR
EMBL:AAFI02000013 PROSITE:PS51419 eggNOG:COG1100 HSSP:Q9UL25
KO:K07976 RefSeq:XP_643480.1 ProteinModelPortal:Q8MXQ2 PRIDE:Q8MXQ2
EnsemblProtists:DDB0230000 GeneID:8620061 KEGG:ddi:DDB_G0275675
OMA:DEAISLK Uniprot:Q8MXQ2
Length = 224
Score = 95 (38.5 bits), Expect = 0.00018, P = 0.00018
Identities = 18/33 (54%), Positives = 23/33 (69%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
+++VG A GK+S+IQRYC F YK TIGV
Sbjct: 31 ILVVGKLACGKTSIIQRYCHNNFQPKYKPTIGV 63
>DICTYBASE|DDB_G0283603 [details] [associations]
symbol:rab32A "Rab GTPase" species:44689
"Dictyostelium discoideum" [GO:0045335 "phagocytic vesicle"
evidence=IDA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 dictyBase:DDB_G0283603
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0045335
EMBL:AAFI02000056 GenomeReviews:CM000153_GR GO:GO:0015031
PROSITE:PS51419 eggNOG:COG1100 KO:K07976 OMA:FCREGGF HSSP:P35288
EMBL:AF116859 RefSeq:XP_638960.1 ProteinModelPortal:Q54QR3
PRIDE:Q54QR3 EnsemblProtists:DDB0201639 GeneID:8624206
KEGG:ddi:DDB_G0283603 ProtClustDB:CLSZ2430347 Uniprot:Q54QR3
Length = 219
Score = 78 (32.5 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 14/33 (42%), Positives = 23/33 (69%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
+++VG+ GK+S+I+R+ F+ YK TIGV
Sbjct: 18 ILVVGDIGTGKTSIIKRFVHNIFSMHYKSTIGV 50
Score = 33 (16.7 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 7/15 (46%), Positives = 11/15 (73%)
Query: 58 GTFTRDY-KKTIGAL 71
G+ TR Y K+ +GA+
Sbjct: 79 GSMTRVYYKEAVGAM 93
>ZFIN|ZDB-GENE-040724-117 [details] [associations]
symbol:rab44 "RAB44, member RAS oncogene family"
species:7955 "Danio rerio" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 ZFIN:ZDB-GENE-040724-117 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 EMBL:AL732598
GeneTree:ENSGT00700000104288 IPI:IPI00503345
Ensembl:ENSDART00000028292 Ensembl:ENSDART00000151592
Uniprot:E9QDA3
Length = 1952
Score = 106 (42.4 bits), Expect = 0.00023, P = 0.00023
Identities = 20/37 (54%), Positives = 27/37 (72%)
Query: 11 IKGTVVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
++ VV+VGN VGK+S I+R+ G FT DY+ TIGV
Sbjct: 1766 VQFNVVMVGNSCVGKTSFIRRFHEGQFTEDYRSTIGV 1802
>UNIPROTKB|F1NIP1 [details] [associations]
symbol:F1NIP1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GeneTree:ENSGT00700000104288 EMBL:AADN02030323 EMBL:AADN02030324
EMBL:AADN02030325 IPI:IPI00600846 ProteinModelPortal:F1NIP1
Ensembl:ENSGALT00000011108 OMA:KVVFLGN Uniprot:F1NIP1
Length = 174
Score = 91 (37.1 bits), Expect = 0.00025, P = 0.00025
Identities = 22/42 (52%), Positives = 24/42 (57%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIG----VKSSMI 52
VV VGN VGKSS I R+C F D TIG VKS M+
Sbjct: 12 VVFVGNSGVGKSSFIHRFCYDRFLADLNATIGIDYQVKSLMV 53
>UNIPROTKB|F1PIU7 [details] [associations]
symbol:RHOF "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016020 "membrane" evidence=IEA] [GO:0005525
"GTP binding" evidence=IEA] [GO:0007264 "small GTPase mediated
signal transduction" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003578
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 PROSITE:PS51420
SMART:SM00174 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0016020 GO:GO:0005622 GeneTree:ENSGT00700000104143 CTD:54509
KO:K07872 OMA:GPGRKEL EMBL:AAEX03014658 RefSeq:XP_853451.1
Ensembl:ENSCAFT00000013019 GeneID:610807 KEGG:cfa:610807
Uniprot:F1PIU7
Length = 207
Score = 78 (32.5 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 13/31 (41%), Positives = 22/31 (70%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTI 45
+VIVG+G GK+S++ Y +G+F DY ++
Sbjct: 18 IVIVGDGGCGKTSLLMVYSQGSFPEDYAPSV 48
Score = 30 (15.6 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 4/8 (50%), Positives = 6/8 (75%)
Query: 52 IQRYCRGT 59
+ +CRGT
Sbjct: 113 VTHFCRGT 120
>TAIR|locus:2171790 [details] [associations]
symbol:RABA4a "RAB GTPase homolog A4A" species:3702
"Arabidopsis thaliana" [GO:0005525 "GTP binding" evidence=IEA;ISS]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0016020 "membrane"
evidence=IDA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0007264 GO:GO:0015031 EMBL:AB013395
PROSITE:PS51419 eggNOG:COG1100 KO:K07976 HOGENOM:HOG000233968
HSSP:P35278 EMBL:AY045947 EMBL:AY079309 EMBL:AY087004
IPI:IPI00520272 RefSeq:NP_201330.1 UniGene:At.9298
ProteinModelPortal:Q9FJN8 SMR:Q9FJN8 STRING:Q9FJN8 PaxDb:Q9FJN8
PRIDE:Q9FJN8 EnsemblPlants:AT5G65270.1 GeneID:836652
KEGG:ath:AT5G65270 TAIR:At5g65270 InParanoid:Q9FJN8 OMA:HGAKGAM
PhylomeDB:Q9FJN8 ProtClustDB:CLSN2685897 Genevestigator:Q9FJN8
Uniprot:Q9FJN8
Length = 226
Score = 93 (37.8 bits), Expect = 0.00031, P = 0.00031
Identities = 18/34 (52%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
VV++G+ AVGKS ++ RY R F+ D K TIGV+
Sbjct: 20 VVLIGDSAVGKSQILARYARDEFSLDSKATIGVE 53
>ZFIN|ZDB-GENE-091118-61 [details] [associations]
symbol:rab34b "RAB34, member RAS oncogene family b"
species:7955 "Danio rerio" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR001806
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
ZFIN:ZDB-GENE-091118-61 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0007264 GeneTree:ENSGT00600000084435 EMBL:CR749178
IPI:IPI00503137 ProteinModelPortal:E7FG87
Ensembl:ENSDART00000004740 Bgee:E7FG87 Uniprot:E7FG87
Length = 259
Score = 93 (37.8 bits), Expect = 0.00041, P = 0.00041
Identities = 21/52 (40%), Positives = 35/52 (67%)
Query: 5 WVLRGSIKGTVVIVGNGAVGKSSMI-QRYCRGTFTRDYKKTIGVKSSMIQRY 55
+V R ++ V++VG+ VGK+ +I +R+C+ +F R YK TIGV M +R+
Sbjct: 47 YVFRLNV-AKVIVVGDVGVGKTCLINRRFCKDSFDRTYKATIGVDFEM-ERF 96
>TAIR|locus:2041036 [details] [associations]
symbol:ARA4 species:3702 "Arabidopsis thaliana"
[GO:0003924 "GTPase activity" evidence=IEA;IDA] [GO:0005525 "GTP
binding" evidence=IEA;ISS;IDA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=ISM]
[GO:0006184 "GTP catabolic process" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0006913
"nucleocytoplasmic transport" evidence=IEA] [GO:0007165 "signal
transduction" evidence=IEA] [GO:0007264 "small GTPase mediated
signal transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0005795 "Golgi stack" evidence=IDA] [GO:0005798
"Golgi-associated vesicle" evidence=IDA] [GO:0005802 "trans-Golgi
network" evidence=IDA] [GO:0009408 "response to heat" evidence=IEP]
[GO:0048219 "inter-Golgi cisterna vesicle-mediated transport"
evidence=TAS] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005829 GO:GO:0005886
GO:GO:0007264 GO:GO:0000139 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0015031 GO:GO:0003924 GO:GO:0005795 GO:GO:0009408
GO:GO:0005798 GO:GO:0005802 PROSITE:PS51419 eggNOG:COG1100
EMBL:AC004450 KO:K07976 HOGENOM:HOG000233968
ProtClustDB:CLSN2683060 EMBL:D01026 EMBL:BT025784 EMBL:AK317205
IPI:IPI00531444 PIR:JS0641 RefSeq:NP_181842.1 UniGene:At.259
ProteinModelPortal:P28187 SMR:P28187 STRING:P28187 PaxDb:P28187
PRIDE:P28187 EnsemblPlants:AT2G43130.1 GeneID:818915
KEGG:ath:AT2G43130 TAIR:At2g43130 InParanoid:P28187 OMA:YDITRSS
PhylomeDB:P28187 Genevestigator:P28187 GermOnline:AT2G43130
GO:GO:0048219 Uniprot:P28187
Length = 214
Score = 91 (37.1 bits), Expect = 0.00045, P = 0.00045
Identities = 17/34 (50%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
+VI+G+ AVGKS+++ RY R F + K TIGV+
Sbjct: 15 IVIIGDSAVGKSNLLTRYARNEFNPNSKATIGVE 48
>TAIR|locus:2065858 [details] [associations]
symbol:RABA5d "RAB GTPase homolog A5D" species:3702
"Arabidopsis thaliana" [GO:0005525 "GTP binding" evidence=IEA;ISS]
[GO:0005794 "Golgi apparatus" evidence=ISM] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0005829 "cytosol"
evidence=IDA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005829 GO:GO:0005886
GO:GO:0007264 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0015031
PROSITE:PS51419 eggNOG:COG1100 EMBL:AC007071 KO:K07976
HOGENOM:HOG000233968 HSSP:P07560 ProtClustDB:CLSN2683060
EMBL:BT009720 EMBL:AK227705 EMBL:AY085494 IPI:IPI00523233
PIR:G84723 RefSeq:NP_180726.1 UniGene:At.14359 UniGene:At.66393
ProteinModelPortal:Q9SIP0 SMR:Q9SIP0 PaxDb:Q9SIP0 PRIDE:Q9SIP0
EnsemblPlants:AT2G31680.1 GeneID:817724 KEGG:ath:AT2G31680
TAIR:At2g31680 InParanoid:Q9SIP0 OMA:ISRRSTF PhylomeDB:Q9SIP0
Genevestigator:Q9SIP0 Uniprot:Q9SIP0
Length = 219
Score = 91 (37.1 bits), Expect = 0.00048, P = 0.00048
Identities = 17/34 (50%), Positives = 24/34 (70%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
+VI+G+ AVGKS+++ RY R F K TIGV+
Sbjct: 15 IVIIGDSAVGKSNLLSRYARNEFNAHSKATIGVE 48
>DICTYBASE|DDB_G0277101 [details] [associations]
symbol:rab11C "Rab GTPase" species:44689
"Dictyostelium discoideum" [GO:0000331 "contractile vacuole"
evidence=IDA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 dictyBase:DDB_G0277101
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0016020
GO:GO:0015031 GenomeReviews:CM000151_GR GO:GO:0000331
PROSITE:PS51419 EMBL:AAFI02000019 eggNOG:COG1100 KO:K07976
HSSP:Q15907 OMA:GRIHEVV RefSeq:XP_642956.1
ProteinModelPortal:Q550H6 SMR:Q550H6 MINT:MINT-6947891 PRIDE:Q550H6
EnsemblProtists:DDB0229395 GeneID:8620825 KEGG:ddi:DDB_G0277101
Uniprot:Q550H6
Length = 224
Score = 91 (37.1 bits), Expect = 0.00050, P = 0.00050
Identities = 17/33 (51%), Positives = 24/33 (72%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
+VI+G+ AVGKS+++ R+ R FT K TIGV
Sbjct: 13 IVIIGDSAVGKSNLLNRFTRNEFTEKTKATIGV 45
>TAIR|locus:2140079 [details] [associations]
symbol:RABA4B "RAB GTPase homolog A4B" species:3702
"Arabidopsis thaliana" [GO:0005525 "GTP binding" evidence=IEA;ISS]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0019900 "kinase binding" evidence=IPI] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0032456 "endocytic recycling"
evidence=IDA] [GO:0031901 "early endosome membrane" evidence=IDA]
[GO:0032588 "trans-Golgi network membrane" evidence=IDA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0005794 GO:GO:0007264
GO:GO:0031901 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0032588
GO:GO:0015031 PROSITE:PS51419 EMBL:AL161596 GO:GO:0032456
eggNOG:COG1100 EMBL:AL035708 KO:K07976 HOGENOM:HOG000233968
HSSP:P07560 ProtClustDB:CLSN2685897 EMBL:U46926 EMBL:AY072448
EMBL:AY128914 EMBL:AY088624 IPI:IPI00516291 PIR:T06105
RefSeq:NP_195709.1 UniGene:At.1649 UniGene:At.48966
ProteinModelPortal:Q9SMQ6 SMR:Q9SMQ6 STRING:Q9SMQ6 PaxDb:Q9SMQ6
PRIDE:Q9SMQ6 EnsemblPlants:AT4G39990.1 GeneID:830160
KEGG:ath:AT4G39990 TAIR:At4g39990 InParanoid:Q9SMQ6 OMA:FEHIPRW
PhylomeDB:Q9SMQ6 Genevestigator:Q9SMQ6 Uniprot:Q9SMQ6
Length = 224
Score = 91 (37.1 bits), Expect = 0.00050, P = 0.00050
Identities = 17/34 (50%), Positives = 25/34 (73%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK 48
VV++G+ AVGKS ++ R+ R F+ D K TIGV+
Sbjct: 20 VVLIGDSAVGKSQLLARFARDEFSMDSKATIGVE 53
>FB|FBgn0036497 [details] [associations]
symbol:Ran-like "Ran-like" species:7227 "Drosophila
melanogaster" [GO:0003924 "GTPase activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005525 "GTP binding"
evidence=IDA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0006913 "nucleocytoplasmic transport"
evidence=IEA] [GO:0006184 "GTP catabolic process" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] InterPro:IPR001806 InterPro:IPR002041
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00627 PROSITE:PS51418
SMART:SM00176 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005634
GO:GO:0005737 GO:GO:0006886 GO:GO:0007264 EMBL:AE014296
GO:GO:0003924 GO:GO:0006913 eggNOG:COG1100
GeneTree:ENSGT00700000104457 KO:K07936 EMBL:AY070523
RefSeq:NP_524082.1 UniGene:Dm.967 ProteinModelPortal:Q9VUN3
SMR:Q9VUN3 DIP:DIP-20704N IntAct:Q9VUN3 MINT:MINT-288264
STRING:Q9VUN3 PRIDE:Q9VUN3 EnsemblMetazoa:FBtr0075616 GeneID:39666
KEGG:dme:Dmel_CG7815 UCSC:CG7815-RA CTD:39666 FlyBase:FBgn0036497
InParanoid:Q9VUN3 OrthoDB:EOG4NGF3N PhylomeDB:Q9VUN3
GenomeRNAi:39666 NextBio:814770 Bgee:Q9VUN3 GermOnline:CG7815
Uniprot:Q9VUN3
Length = 217
Score = 90 (36.7 bits), Expect = 0.00061, P = 0.00061
Identities = 17/56 (30%), Positives = 32/56 (57%)
Query: 15 VVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGVK-SSMIQRYCRGTFTRDYKKTIG 69
++++G+G GK+++++R+ G F Y T+GV+ ++ RG F D T G
Sbjct: 13 LILIGDGGTGKTTLVKRHLTGEFKMQYNATLGVEVEQLLFNTNRGVFRIDVWDTAG 68
>UNIPROTKB|Q6IMM1 [details] [associations]
symbol:DNAJC27 "DnaJ homolog subfamily C member 27"
species:9031 "Gallus gallus" [GO:0007264 "small GTPase mediated
signal transduction" evidence=IEA] [GO:0005525 "GTP binding"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
InterPro:IPR001806 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
InterPro:IPR001623 Pfam:PF00226 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005739 GO:GO:0007264 GO:GO:0006457 PROSITE:PS51419
Gene3D:1.10.287.110 PRINTS:PR00625 SMART:SM00271 SUPFAM:SSF46565
PROSITE:PS00636 PROSITE:PS50076 eggNOG:COG1100 CTD:51277
GeneTree:ENSGT00390000003530 HOGENOM:HOG000233969
HOVERGEN:HBG056504 OMA:FYVSIVD OrthoDB:EOG4DJJX1 EMBL:DR414424
EMBL:BK001282 IPI:IPI00592340 RefSeq:NP_998723.1 UniGene:Gga.19029
HSSP:Q9UL25 ProteinModelPortal:Q6IMM1 SMR:Q6IMM1 PRIDE:Q6IMM1
Ensembl:ENSGALT00000026802 GeneID:402783 KEGG:gga:402783
InParanoid:Q6IMM1 NextBio:20816623 Uniprot:Q6IMM1
Length = 273
Score = 90 (36.7 bits), Expect = 0.00097, P = 0.00097
Identities = 18/40 (45%), Positives = 25/40 (62%)
Query: 8 RGSIKGTVVIVGNGAVGKSSMIQRYCRGTFTRDYKKTIGV 47
R S++ V+ +GN VGKS +I+RYC F Y TIG+
Sbjct: 12 RKSLRIKVISMGNAEVGKSCIIKRYCEKRFVPKYLATIGI 51
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.325 0.139 0.419 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 71 71 0.00091 102 3 11 22 0.43 28
29 0.42 29
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 57
No. of states in DFA: 452 (48 KB)
Total size of DFA: 80 KB (2064 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 7.54u 0.08s 7.62t Elapsed: 00:00:05
Total cpu time: 7.54u 0.08s 7.62t Elapsed: 00:00:05
Start: Thu Aug 15 13:08:22 2013 End: Thu Aug 15 13:08:27 2013