BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy2518
(208 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|242015478|ref|XP_002428380.1| rab23, putative [Pediculus humanus corporis]
gi|212512992|gb|EEB15642.1| rab23, putative [Pediculus humanus corporis]
Length = 182
Score = 239 bits (610), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 110/139 (79%), Positives = 129/139 (92%), Gaps = 1/139 (0%)
Query: 70 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGE 129
+GE+VRLMLWDTAGQEEFDAITKAYYRGAQACV+TFST +RDSFEA HSWK+KVE+ECGE
Sbjct: 2 KGEDVRLMLWDTAGQEEFDAITKAYYRGAQACVLTFSTTNRDSFEAIHSWKLKVEDECGE 61
Query: 130 IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSEL 189
IPTVLVQNKIDL+DQSVV PEE + LS++LGC+L+RTSVKEDIN+NS+FRYL KCLSE+
Sbjct: 62 IPTVLVQNKIDLIDQSVVEPEEVERLSQSLGCKLIRTSVKEDININSVFRYLAAKCLSEI 121
Query: 190 RQQEEEYSINGNGLPPYTI 208
+QE+EYSI GNG+ P+TI
Sbjct: 122 HEQEKEYSI-GNGISPFTI 139
Score = 107 bits (267), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 47/54 (87%), Positives = 52/54 (96%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 60
+GE+VRLMLWDTAGQEEFDAITKAYYRGAQACV+TFST +RDSFEA HSWK+KV
Sbjct: 2 KGEDVRLMLWDTAGQEEFDAITKAYYRGAQACVLTFSTTNRDSFEAIHSWKLKV 55
>gi|91087349|ref|XP_975612.1| PREDICTED: similar to GA15247-PA [Tribolium castaneum]
gi|270010613|gb|EFA07061.1| hypothetical protein TcasGA2_TC010038 [Tribolium castaneum]
Length = 232
Score = 226 bits (577), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 103/123 (83%), Positives = 116/123 (94%)
Query: 68 ECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENEC 127
E +GEEVRLMLWDTAGQEEFDAITKAYYRGAQACV+ FST DRDSFEAAHSWK+KVENEC
Sbjct: 52 EVDGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVLAFSTTDRDSFEAAHSWKLKVENEC 111
Query: 128 GEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLS 187
GEIPTV+VQNKIDL+DQSVV PEEADLL+RALGCRL+RTSVKED+NV ++FR+L +CL+
Sbjct: 112 GEIPTVIVQNKIDLMDQSVVNPEEADLLARALGCRLLRTSVKEDVNVAAVFRHLAARCLA 171
Query: 188 ELR 190
ELR
Sbjct: 172 ELR 174
Score = 110 bits (276), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 59/95 (62%), Positives = 66/95 (69%), Gaps = 14/95 (14%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVSIKRTI 66
+GEEVRLMLWDTAGQEEFDAITKAYYRGAQACV+ FST DRDSFEAAHSWK+KV
Sbjct: 54 DGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVLAFSTTDRDSFEAAHSWKLKVE----- 108
Query: 67 KECEGE--------EVRLMLWDTAGQEEFDAITKA 93
EC GE ++ LM EE D + +A
Sbjct: 109 NEC-GEIPTVIVQNKIDLMDQSVVNPEEADLLARA 142
>gi|332374980|gb|AEE62631.1| unknown [Dendroctonus ponderosae]
Length = 239
Score = 224 bits (570), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 104/135 (77%), Positives = 125/135 (92%), Gaps = 1/135 (0%)
Query: 68 ECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENEC 127
E +GE+VRLMLWDTAGQEEFDAITKAYYRGAQACV+ FST DRDSFEAAHSWK+KVENEC
Sbjct: 52 EVDGEDVRLMLWDTAGQEEFDAITKAYYRGAQACVLAFSTTDRDSFEAAHSWKLKVENEC 111
Query: 128 GEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLS 187
GEIPTV+VQNKIDLL+QSVV PEEA+LL+RALGCRL+RTSVKED+NV+++FR+L +CL+
Sbjct: 112 GEIPTVIVQNKIDLLEQSVVNPEEAELLARALGCRLVRTSVKEDVNVSAVFRHLAQRCLA 171
Query: 188 ELRQ-QEEEYSINGN 201
ELR +E++ +I G+
Sbjct: 172 ELRDPREDDCAIPGD 186
Score = 108 bits (271), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 48/54 (88%), Positives = 52/54 (96%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 60
+GE+VRLMLWDTAGQEEFDAITKAYYRGAQACV+ FST DRDSFEAAHSWK+KV
Sbjct: 54 DGEDVRLMLWDTAGQEEFDAITKAYYRGAQACVLAFSTTDRDSFEAAHSWKLKV 107
>gi|242247191|ref|NP_001156195.1| GTP-binding protein YPTM1-like [Acyrthosiphon pisum]
gi|239799251|dbj|BAH70556.1| ACYPI005808 [Acyrthosiphon pisum]
Length = 231
Score = 219 bits (557), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 99/142 (69%), Positives = 128/142 (90%), Gaps = 2/142 (1%)
Query: 68 ECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENEC 127
EC GE+VRLMLWDTAGQEEFDAITKAYYRGAQACV+ FST DRDSFEA HSWK+KVE+EC
Sbjct: 52 ECNGEDVRLMLWDTAGQEEFDAITKAYYRGAQACVLAFSTTDRDSFEAIHSWKIKVEDEC 111
Query: 128 GEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLS 187
G+IPTV+VQNK+DL+++S V P+E D+L+R+LGC+L+ TSVK+D+NVN++FRYL T+CL
Sbjct: 112 GKIPTVIVQNKVDLIERSQVDPQEVDILARSLGCKLICTSVKDDVNVNNVFRYLATRCLM 171
Query: 188 ELRQQEEEYSINGNGL-PPYTI 208
E++++E+EY ++GNG+ YTI
Sbjct: 172 EIQKEEQEY-MSGNGIHQTYTI 192
Score = 109 bits (272), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 48/55 (87%), Positives = 51/55 (92%)
Query: 6 CEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 60
C GE+VRLMLWDTAGQEEFDAITKAYYRGAQACV+ FST DRDSFEA HSWK+KV
Sbjct: 53 CNGEDVRLMLWDTAGQEEFDAITKAYYRGAQACVLAFSTTDRDSFEAIHSWKIKV 107
>gi|357631098|gb|EHJ78793.1| putative rab23 [Danaus plexippus]
Length = 222
Score = 210 bits (535), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 94/125 (75%), Positives = 111/125 (88%)
Query: 70 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGE 129
+GEEVRLMLWDTAGQEEFDAITKAYYRGA ACV+ FST DRDSF A HSWK+KVENECGE
Sbjct: 54 DGEEVRLMLWDTAGQEEFDAITKAYYRGAHACVLAFSTTDRDSFLALHSWKLKVENECGE 113
Query: 130 IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSEL 189
IPT++VQNKIDL+DQ VV P+EA+L++RALGCRLMR SVKED+NV ++FR L ++CL++L
Sbjct: 114 IPTIIVQNKIDLMDQCVVGPDEAELVARALGCRLMRASVKEDVNVGAVFRALASRCLADL 173
Query: 190 RQQEE 194
R E
Sbjct: 174 RADSE 178
Score = 103 bits (257), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 46/54 (85%), Positives = 49/54 (90%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 60
+GEEVRLMLWDTAGQEEFDAITKAYYRGA ACV+ FST DRDSF A HSWK+KV
Sbjct: 54 DGEEVRLMLWDTAGQEEFDAITKAYYRGAHACVLAFSTTDRDSFLALHSWKLKV 107
>gi|307212547|gb|EFN88270.1| Ras-related protein Rab-23 [Harpegnathos saltator]
Length = 240
Score = 203 bits (517), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 91/129 (70%), Positives = 112/129 (86%)
Query: 68 ECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENEC 127
E +GE+VRLMLWDTAGQEEFDAIT AYYRGA ACV+ +S DRDSF+A SWK+KVENEC
Sbjct: 52 EVDGEDVRLMLWDTAGQEEFDAITAAYYRGAHACVLAYSATDRDSFDAIPSWKLKVENEC 111
Query: 128 GEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLS 187
GEIPTVLVQNKIDL+DQ V+ P+EA+ L RALGC+L+RTSVKEDI V S+FR+L ++CL
Sbjct: 112 GEIPTVLVQNKIDLVDQCVIDPDEAERLGRALGCKLLRTSVKEDIGVMSVFRHLASRCLH 171
Query: 188 ELRQQEEEY 196
E+R+ +++Y
Sbjct: 172 EMRRSDDDY 180
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 41/54 (75%), Positives = 47/54 (87%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 60
+GE+VRLMLWDTAGQEEFDAIT AYYRGA ACV+ +S DRDSF+A SWK+KV
Sbjct: 54 DGEDVRLMLWDTAGQEEFDAITAAYYRGAHACVLAYSATDRDSFDAIPSWKLKV 107
>gi|307167470|gb|EFN61043.1| Ras-related protein Rab-23 [Camponotus floridanus]
Length = 240
Score = 202 bits (515), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 91/129 (70%), Positives = 113/129 (87%)
Query: 68 ECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENEC 127
E +GE+VRLMLWDTAGQEEFDAIT AYYRGA ACV+ +S+ DRDSF+A SWK+KVENEC
Sbjct: 52 EVDGEDVRLMLWDTAGQEEFDAITAAYYRGAHACVLAYSSTDRDSFDAIPSWKLKVENEC 111
Query: 128 GEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLS 187
GEIPTVLVQNKIDL++Q VV P+EA+ L RALGC+L+RTSVKEDI V S+FR+L ++CL
Sbjct: 112 GEIPTVLVQNKIDLVEQCVVDPDEAERLGRALGCKLLRTSVKEDIGVMSVFRHLASRCLH 171
Query: 188 ELRQQEEEY 196
E+R+ +++Y
Sbjct: 172 EMRRSDDDY 180
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 41/54 (75%), Positives = 48/54 (88%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 60
+GE+VRLMLWDTAGQEEFDAIT AYYRGA ACV+ +S+ DRDSF+A SWK+KV
Sbjct: 54 DGEDVRLMLWDTAGQEEFDAITAAYYRGAHACVLAYSSTDRDSFDAIPSWKLKV 107
>gi|158288058|ref|XP_309942.4| AGAP011565-PA [Anopheles gambiae str. PEST]
gi|157019291|gb|EAA05694.4| AGAP011565-PA [Anopheles gambiae str. PEST]
Length = 226
Score = 202 bits (513), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 92/125 (73%), Positives = 109/125 (87%)
Query: 68 ECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENEC 127
E +GE++R+MLWDTAGQEEFDAITKAYYRGAQACV+TFST DR SFEA WK KVENEC
Sbjct: 66 EIDGEDIRIMLWDTAGQEEFDAITKAYYRGAQACVLTFSTTDRASFEAIREWKRKVENEC 125
Query: 128 GEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLS 187
EIPTVLVQNKIDL+DQ+VV+ EEA+ L+ +LGCRL+RTSVKED+NV ++FRYL TKC
Sbjct: 126 SEIPTVLVQNKIDLMDQAVVSFEEAEALAHSLGCRLIRTSVKEDVNVATVFRYLATKCHQ 185
Query: 188 ELRQQ 192
++QQ
Sbjct: 186 MMKQQ 190
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 43/54 (79%), Positives = 48/54 (88%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 60
+GE++R+MLWDTAGQEEFDAITKAYYRGAQACV+TFST DR SFEA WK KV
Sbjct: 68 DGEDIRIMLWDTAGQEEFDAITKAYYRGAQACVLTFSTTDRASFEAIREWKRKV 121
>gi|332020425|gb|EGI60845.1| Ras-related protein Rab-23 [Acromyrmex echinatior]
Length = 240
Score = 200 bits (509), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 90/129 (69%), Positives = 111/129 (86%)
Query: 68 ECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENEC 127
E +GE+VRLMLWDTAGQEEFDAIT AYYRGA ACV+ +S DRDSF+A SWK+KVENEC
Sbjct: 52 EVDGEDVRLMLWDTAGQEEFDAITAAYYRGAHACVLAYSATDRDSFDAIPSWKLKVENEC 111
Query: 128 GEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLS 187
GEIPTVLVQNKIDL+DQSV+ +EA+ L R LGC+L+RTSVKEDI V S+FR+L ++CL
Sbjct: 112 GEIPTVLVQNKIDLVDQSVIDADEAERLGRTLGCKLLRTSVKEDIGVMSVFRHLASRCLH 171
Query: 188 ELRQQEEEY 196
E+R+ +++Y
Sbjct: 172 EMRRSDDDY 180
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 41/54 (75%), Positives = 47/54 (87%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 60
+GE+VRLMLWDTAGQEEFDAIT AYYRGA ACV+ +S DRDSF+A SWK+KV
Sbjct: 54 DGEDVRLMLWDTAGQEEFDAITAAYYRGAHACVLAYSATDRDSFDAIPSWKLKV 107
>gi|383860301|ref|XP_003705629.1| PREDICTED: ras-related protein Rab-23-like [Megachile rotundata]
Length = 240
Score = 200 bits (509), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 89/129 (68%), Positives = 112/129 (86%)
Query: 68 ECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENEC 127
E +GE+VRLMLWDTAGQEEFDAIT AYYRGA ACV+ +S DRDSF+A SWK+KVENEC
Sbjct: 52 EVDGEDVRLMLWDTAGQEEFDAITAAYYRGAHACVLAYSATDRDSFDAIPSWKLKVENEC 111
Query: 128 GEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLS 187
GEIPTVLVQNK+DL+DQ V+ P+EA+ L RALGC+L+RTSVKED+ V S+FR+L ++CL
Sbjct: 112 GEIPTVLVQNKMDLVDQCVIDPDEAERLGRALGCKLLRTSVKEDVGVMSVFRHLASRCLH 171
Query: 188 ELRQQEEEY 196
E+R+ +++Y
Sbjct: 172 EMRRCDDDY 180
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 41/54 (75%), Positives = 47/54 (87%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 60
+GE+VRLMLWDTAGQEEFDAIT AYYRGA ACV+ +S DRDSF+A SWK+KV
Sbjct: 54 DGEDVRLMLWDTAGQEEFDAITAAYYRGAHACVLAYSATDRDSFDAIPSWKLKV 107
>gi|170054181|ref|XP_001863008.1| GTP-binding protein YPTM1 [Culex quinquefasciatus]
gi|167874528|gb|EDS37911.1| GTP-binding protein YPTM1 [Culex quinquefasciatus]
Length = 223
Score = 200 bits (509), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 91/125 (72%), Positives = 112/125 (89%)
Query: 68 ECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENEC 127
E +GE++R+MLWDTAGQEEFDAITKAYYRGAQACV+TFST DR SFEA WK+KVENEC
Sbjct: 52 ELDGEDIRIMLWDTAGQEEFDAITKAYYRGAQACVLTFSTTDRASFEAIRDWKVKVENEC 111
Query: 128 GEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLS 187
EIPTVLVQNKIDL+D++VV+ +EA+ L+++LGCRL+RTSVKED+NV S+FRYL TKC
Sbjct: 112 CEIPTVLVQNKIDLMDKAVVSFDEAESLAQSLGCRLIRTSVKEDVNVASVFRYLATKCHQ 171
Query: 188 ELRQQ 192
+++QQ
Sbjct: 172 QMKQQ 176
>gi|157119872|ref|XP_001659548.1| rab23 [Aedes aegypti]
gi|108883132|gb|EAT47357.1| AAEL001524-PA [Aedes aegypti]
Length = 223
Score = 200 bits (508), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 90/125 (72%), Positives = 111/125 (88%)
Query: 68 ECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENEC 127
E +GE++R+MLWDTAGQEEFDAITKAYYRGAQACV+TFST DR SFEA WK+KVENEC
Sbjct: 52 ELDGEDIRIMLWDTAGQEEFDAITKAYYRGAQACVLTFSTTDRASFEAIREWKVKVENEC 111
Query: 128 GEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLS 187
EIPTVLVQNKIDL+D++VV+ +EA+ L+++LGCRL+RTSVKED+NV S+FRYL KC
Sbjct: 112 SEIPTVLVQNKIDLMDKAVVSFDEAEALAQSLGCRLIRTSVKEDVNVASVFRYLANKCHQ 171
Query: 188 ELRQQ 192
+++QQ
Sbjct: 172 QMKQQ 176
>gi|350404524|ref|XP_003487131.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein Rab-23-like
[Bombus impatiens]
Length = 295
Score = 199 bits (507), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 88/127 (69%), Positives = 111/127 (87%)
Query: 70 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGE 129
+GE+VRLMLWDTAGQEEFDAIT AYYRGA ACV+ +S DRDSF+A SWK+KVENECGE
Sbjct: 109 DGEDVRLMLWDTAGQEEFDAITAAYYRGAHACVLAYSATDRDSFDAIPSWKLKVENECGE 168
Query: 130 IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSEL 189
IPTVLVQNK+DL+DQ V+ P+EA+ L RALGC+L+RTSVKED+ V S+FR+L ++CL E+
Sbjct: 169 IPTVLVQNKMDLVDQCVIDPDEAERLGRALGCKLLRTSVKEDVGVMSVFRHLASRCLHEM 228
Query: 190 RQQEEEY 196
R+ +++Y
Sbjct: 229 RRCDDDY 235
Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 41/56 (73%), Positives = 48/56 (85%)
Query: 5 ICEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 60
+ +GE+VRLMLWDTAGQEEFDAIT AYYRGA ACV+ +S DRDSF+A SWK+KV
Sbjct: 107 LVDGEDVRLMLWDTAGQEEFDAITAAYYRGAHACVLAYSATDRDSFDAIPSWKLKV 162
>gi|312373862|gb|EFR21537.1| hypothetical protein AND_16894 [Anopheles darlingi]
Length = 224
Score = 199 bits (506), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 90/125 (72%), Positives = 110/125 (88%)
Query: 68 ECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENEC 127
E +GE+VR+MLWDTAGQEEFDAITKAYYRGAQACV+TFST DR S+EA WK+KVENEC
Sbjct: 52 EIDGEDVRIMLWDTAGQEEFDAITKAYYRGAQACVLTFSTTDRASYEAIREWKVKVENEC 111
Query: 128 GEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLS 187
EIPTVLVQNKIDL++Q+VV+ +EA+ L+ LGCRL+RTSVKED+NV ++FRYL TKC
Sbjct: 112 SEIPTVLVQNKIDLMEQAVVSFDEAEALAHQLGCRLIRTSVKEDVNVATVFRYLATKCHQ 171
Query: 188 ELRQQ 192
+++QQ
Sbjct: 172 QMKQQ 176
Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 43/54 (79%), Positives = 49/54 (90%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 60
+GE+VR+MLWDTAGQEEFDAITKAYYRGAQACV+TFST DR S+EA WK+KV
Sbjct: 54 DGEDVRIMLWDTAGQEEFDAITKAYYRGAQACVLTFSTTDRASYEAIREWKVKV 107
>gi|156554968|ref|XP_001602379.1| PREDICTED: ras-related protein Rab-23-like [Nasonia vitripennis]
Length = 238
Score = 194 bits (492), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 87/119 (73%), Positives = 104/119 (87%)
Query: 68 ECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENEC 127
E +GE+VRLMLWDTAGQEEFDAIT AYYRGA ACV+ FS DRDSF+A SWK+KVENEC
Sbjct: 52 EVDGEDVRLMLWDTAGQEEFDAITAAYYRGAHACVLAFSATDRDSFDAIPSWKLKVENEC 111
Query: 128 GEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCL 186
GEIPTVLVQNK+DL+DQ V+ P+EA+ L RALGC+L+RTSVKED+ V S+FR+L ++CL
Sbjct: 112 GEIPTVLVQNKMDLIDQCVIDPDEAERLGRALGCKLLRTSVKEDVGVMSVFRHLASRCL 170
Score = 95.9 bits (237), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 42/54 (77%), Positives = 47/54 (87%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 60
+GE+VRLMLWDTAGQEEFDAIT AYYRGA ACV+ FS DRDSF+A SWK+KV
Sbjct: 54 DGEDVRLMLWDTAGQEEFDAITAAYYRGAHACVLAFSATDRDSFDAIPSWKLKV 107
>gi|328788824|ref|XP_003251188.1| PREDICTED: ras-related protein Rab-23 isoform 1 [Apis mellifera]
Length = 301
Score = 190 bits (482), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 85/130 (65%), Positives = 108/130 (83%)
Query: 67 KECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENE 126
K +GE+VRLMLWDTAGQEEFDAIT AYYRGA ACV+ +S DRDSF+A SWK KV+NE
Sbjct: 112 KSVDGEDVRLMLWDTAGQEEFDAITAAYYRGAHACVLAYSATDRDSFDAIPSWKQKVKNE 171
Query: 127 CGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCL 186
CGEIPTVLVQNK+DL+DQ V+ +EA+ L LGC+L+RTSVKED+ V S+FR+L ++CL
Sbjct: 172 CGEIPTVLVQNKMDLVDQCVIDLDEAERLGHILGCKLLRTSVKEDVGVMSVFRHLASRCL 231
Query: 187 SELRQQEEEY 196
E+R+ +++Y
Sbjct: 232 HEMRRCDDDY 241
>gi|194745502|ref|XP_001955227.1| GF18654 [Drosophila ananassae]
gi|190628264|gb|EDV43788.1| GF18654 [Drosophila ananassae]
Length = 270
Score = 189 bits (481), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 90/142 (63%), Positives = 110/142 (77%), Gaps = 2/142 (1%)
Query: 68 ECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENEC 127
E +GE+VR+MLWDTAGQEEFD ITKAYYRGAQA V+ FST DR SFEA WK KVENEC
Sbjct: 82 EIDGEDVRIMLWDTAGQEEFDCITKAYYRGAQASVLVFSTTDRASFEAIKDWKRKVENEC 141
Query: 128 GEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLS 187
EIPTV+VQNKIDL++Q+VV +E + L++ L CRL+RTSVKEDINV S+FRYL TKC
Sbjct: 142 NEIPTVIVQNKIDLIEQAVVTADEVETLAKMLNCRLIRTSVKEDINVASVFRYLATKCHQ 201
Query: 188 ELRQQEEEYSIN--GNGLPPYT 207
+ Q ++ + N + PPY+
Sbjct: 202 LMTQGYDQAAGNQQNSSHPPYS 223
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/54 (75%), Positives = 45/54 (83%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 60
+GE+VR+MLWDTAGQEEFD ITKAYYRGAQA V+ FST DR SFEA WK KV
Sbjct: 84 DGEDVRIMLWDTAGQEEFDCITKAYYRGAQASVLVFSTTDRASFEAIKDWKRKV 137
>gi|328788822|ref|XP_393641.3| PREDICTED: ras-related protein Rab-23 isoform 2 [Apis mellifera]
gi|380027747|ref|XP_003697580.1| PREDICTED: ras-related protein Rab-23-like [Apis florea]
Length = 240
Score = 189 bits (481), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 85/129 (65%), Positives = 108/129 (83%)
Query: 68 ECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENEC 127
E +GE+VRLMLWDTAGQEEFDAIT AYYRGA ACV+ +S DRDSF+A SWK KV+NEC
Sbjct: 52 EVDGEDVRLMLWDTAGQEEFDAITAAYYRGAHACVLAYSATDRDSFDAIPSWKQKVKNEC 111
Query: 128 GEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLS 187
GEIPTVLVQNK+DL+DQ V+ +EA+ L LGC+L+RTSVKED+ V S+FR+L ++CL
Sbjct: 112 GEIPTVLVQNKMDLVDQCVIDLDEAERLGHILGCKLLRTSVKEDVGVMSVFRHLASRCLH 171
Query: 188 ELRQQEEEY 196
E+R+ +++Y
Sbjct: 172 EMRRCDDDY 180
>gi|21357169|ref|NP_649574.1| Rab23 [Drosophila melanogaster]
gi|7296691|gb|AAF51970.1| Rab23 [Drosophila melanogaster]
gi|21064699|gb|AAM29579.1| RH23273p [Drosophila melanogaster]
gi|220949250|gb|ACL87168.1| Rab23-PA [synthetic construct]
gi|220958386|gb|ACL91736.1| Rab23-PA [synthetic construct]
Length = 268
Score = 189 bits (481), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 89/142 (62%), Positives = 110/142 (77%), Gaps = 2/142 (1%)
Query: 68 ECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENEC 127
E +GE+VR+MLWDTAGQEEFD ITKAYYRGAQA V+ FST DR SF+A WK KVENEC
Sbjct: 80 EIDGEDVRIMLWDTAGQEEFDCITKAYYRGAQASVLVFSTTDRASFDAIKDWKRKVENEC 139
Query: 128 GEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLS 187
EIPTV+VQNKIDL++Q+VV +E + L++ L CRL+RTSVKEDINV S+FRYL TKC
Sbjct: 140 NEIPTVIVQNKIDLIEQAVVTADEVETLAKLLNCRLIRTSVKEDINVASVFRYLATKCHQ 199
Query: 188 ELRQQEEEYSIN--GNGLPPYT 207
+ Q ++ + N + PPY+
Sbjct: 200 LMTQSYDQVAGNQQNSSHPPYS 221
>gi|194898853|ref|XP_001978977.1| GG10890 [Drosophila erecta]
gi|190650680|gb|EDV47935.1| GG10890 [Drosophila erecta]
Length = 268
Score = 189 bits (480), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 89/142 (62%), Positives = 110/142 (77%), Gaps = 2/142 (1%)
Query: 68 ECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENEC 127
E +GE+VR+MLWDTAGQEEFD ITKAYYRGAQA V+ FST DR SF+A WK KVENEC
Sbjct: 80 EIDGEDVRIMLWDTAGQEEFDCITKAYYRGAQASVLVFSTTDRASFDAIKDWKRKVENEC 139
Query: 128 GEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLS 187
EIPTV+VQNKIDL++Q+VV +E + L++ L CRL+RTSVKEDINV S+FRYL TKC
Sbjct: 140 NEIPTVIVQNKIDLIEQAVVTADEVETLAKLLNCRLIRTSVKEDINVASVFRYLATKCHQ 199
Query: 188 ELRQQEEEYSIN--GNGLPPYT 207
+ Q ++ + N + PPY+
Sbjct: 200 LMTQSYDQAAGNQQNSSHPPYS 221
>gi|195452414|ref|XP_002073343.1| GK14081 [Drosophila willistoni]
gi|194169428|gb|EDW84329.1| GK14081 [Drosophila willistoni]
Length = 272
Score = 189 bits (480), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 92/147 (62%), Positives = 110/147 (74%), Gaps = 8/147 (5%)
Query: 68 ECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENEC 127
E +GE+VR+MLWDTAGQEEFD ITKAYYRGAQA V+ FST DR SFEA WK KVENEC
Sbjct: 78 EIDGEDVRIMLWDTAGQEEFDCITKAYYRGAQASVLVFSTTDRASFEAIKDWKRKVENEC 137
Query: 128 GEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLS 187
EIPTV+VQNKIDL++Q+VV +E + L++ L CRL+RTSVKEDINV S+FRYL TKC
Sbjct: 138 NEIPTVIVQNKIDLIEQAVVTADEVETLAKMLNCRLIRTSVKEDINVASVFRYLATKC-H 196
Query: 188 ELRQQEEEYSINGNG-------LPPYT 207
+L Q + + G G PPY+
Sbjct: 197 QLMTQSYDQASGGTGNQQQSSTHPPYS 223
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/54 (75%), Positives = 45/54 (83%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 60
+GE+VR+MLWDTAGQEEFD ITKAYYRGAQA V+ FST DR SFEA WK KV
Sbjct: 80 DGEDVRIMLWDTAGQEEFDCITKAYYRGAQASVLVFSTTDRASFEAIKDWKRKV 133
>gi|195343771|ref|XP_002038464.1| GM10600 [Drosophila sechellia]
gi|195568527|ref|XP_002102265.1| GD19590 [Drosophila simulans]
gi|194133485|gb|EDW55001.1| GM10600 [Drosophila sechellia]
gi|194198192|gb|EDX11768.1| GD19590 [Drosophila simulans]
Length = 268
Score = 189 bits (480), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 89/142 (62%), Positives = 110/142 (77%), Gaps = 2/142 (1%)
Query: 68 ECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENEC 127
E +GE+VR+MLWDTAGQEEFD ITKAYYRGAQA V+ FST DR SF+A WK KVENEC
Sbjct: 80 EIDGEDVRIMLWDTAGQEEFDCITKAYYRGAQASVLVFSTTDRASFDAIKDWKRKVENEC 139
Query: 128 GEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLS 187
EIPTV+VQNKIDL++Q+VV +E + L++ L CRL+RTSVKEDINV S+FRYL TKC
Sbjct: 140 NEIPTVIVQNKIDLIEQAVVTADEVETLAKLLNCRLIRTSVKEDINVASVFRYLATKCHQ 199
Query: 188 ELRQQEEEYSIN--GNGLPPYT 207
+ Q ++ + N + PPY+
Sbjct: 200 LMTQSYDQAAGNQQNSSHPPYS 221
>gi|125775716|ref|XP_001359041.1| GA15247 [Drosophila pseudoobscura pseudoobscura]
gi|195146318|ref|XP_002014133.1| GL23019 [Drosophila persimilis]
gi|54638782|gb|EAL28184.1| GA15247 [Drosophila pseudoobscura pseudoobscura]
gi|194103076|gb|EDW25119.1| GL23019 [Drosophila persimilis]
Length = 268
Score = 188 bits (478), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 89/141 (63%), Positives = 108/141 (76%), Gaps = 2/141 (1%)
Query: 68 ECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENEC 127
E +GE+VR+MLWDTAGQEEFD ITKAYYRGAQA V+ FST DR SFEA WK KVENEC
Sbjct: 80 EIDGEDVRIMLWDTAGQEEFDCITKAYYRGAQASVLVFSTTDRASFEAIKDWKRKVENEC 139
Query: 128 GEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLS 187
EIPTV+VQNKIDL++Q+VV +E + L++ L CRL+RTSVKEDINV S+FRYL TKC
Sbjct: 140 NEIPTVIVQNKIDLIEQAVVTADEVETLAKVLNCRLIRTSVKEDINVASVFRYLATKCHQ 199
Query: 188 ELRQQEEEYSI--NGNGLPPY 206
+ Q ++ + + PPY
Sbjct: 200 LMTQSYDQTGSQQHSSNHPPY 220
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/54 (75%), Positives = 45/54 (83%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 60
+GE+VR+MLWDTAGQEEFD ITKAYYRGAQA V+ FST DR SFEA WK KV
Sbjct: 82 DGEDVRIMLWDTAGQEEFDCITKAYYRGAQASVLVFSTTDRASFEAIKDWKRKV 135
>gi|195038501|ref|XP_001990695.1| GH18115 [Drosophila grimshawi]
gi|193894891|gb|EDV93757.1| GH18115 [Drosophila grimshawi]
Length = 273
Score = 187 bits (475), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 89/148 (60%), Positives = 110/148 (74%), Gaps = 8/148 (5%)
Query: 68 ECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENEC 127
E +GE+VR+MLWDTAGQEEFD ITKAYYRGAQA V+ FST DR SF+A WK KVENEC
Sbjct: 79 EIDGEDVRIMLWDTAGQEEFDCITKAYYRGAQASVLVFSTTDRASFDAIKEWKRKVENEC 138
Query: 128 GEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLS 187
EIPTV+VQNKIDL++Q+VV+ +E + L++ L CRL+RTSVKEDINV S+FRYL TKC
Sbjct: 139 NEIPTVIVQNKIDLIEQAVVSADEVETLAKMLNCRLIRTSVKEDINVASVFRYLATKCHQ 198
Query: 188 ELRQQEEEYSINGNG--------LPPYT 207
+ Q ++ + G PPY+
Sbjct: 199 LMTQSYDQATATTTGDNGQQHSTHPPYS 226
Score = 89.7 bits (221), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 40/54 (74%), Positives = 45/54 (83%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 60
+GE+VR+MLWDTAGQEEFD ITKAYYRGAQA V+ FST DR SF+A WK KV
Sbjct: 81 DGEDVRIMLWDTAGQEEFDCITKAYYRGAQASVLVFSTTDRASFDAIKEWKRKV 134
>gi|195389781|ref|XP_002053552.1| GJ23289 [Drosophila virilis]
gi|194151638|gb|EDW67072.1| GJ23289 [Drosophila virilis]
Length = 276
Score = 187 bits (475), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 90/147 (61%), Positives = 111/147 (75%), Gaps = 7/147 (4%)
Query: 68 ECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENEC 127
E +GE+VR+MLWDTAGQEEFD ITKAYYRGAQA V+ FST DR SF+A WK KVENEC
Sbjct: 83 EIDGEDVRIMLWDTAGQEEFDCITKAYYRGAQASVLVFSTTDRASFDAIKEWKRKVENEC 142
Query: 128 GEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLS 187
EIPTV+VQNKIDL++Q+VV+ +E + L++ L CRL+RTSVKEDINV S+FRYL TKC
Sbjct: 143 NEIPTVIVQNKIDLIEQAVVSADEVETLAKMLNCRLIRTSVKEDINVASVFRYLATKCHQ 202
Query: 188 ELRQQ-EEEYSINGNG------LPPYT 207
+ Q ++ +GN PPY+
Sbjct: 203 LMTQSYDQAAGADGNNSQQQSTHPPYS 229
Score = 89.7 bits (221), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 40/54 (74%), Positives = 45/54 (83%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 60
+GE+VR+MLWDTAGQEEFD ITKAYYRGAQA V+ FST DR SF+A WK KV
Sbjct: 85 DGEDVRIMLWDTAGQEEFDCITKAYYRGAQASVLVFSTTDRASFDAIKEWKRKV 138
>gi|195107162|ref|XP_001998185.1| GI23830 [Drosophila mojavensis]
gi|193914779|gb|EDW13646.1| GI23830 [Drosophila mojavensis]
Length = 275
Score = 187 bits (474), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 89/146 (60%), Positives = 110/146 (75%), Gaps = 6/146 (4%)
Query: 68 ECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENEC 127
E +GE+VR+MLWDTAGQEEFD ITKAYYRGAQA V+ FST DR SF+A WK KVENEC
Sbjct: 83 EIDGEDVRIMLWDTAGQEEFDCITKAYYRGAQASVLVFSTTDRASFDAIKEWKRKVENEC 142
Query: 128 GEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLS 187
EIPTV+VQNKIDL++Q+VV+ +E + L++ L CRL+RTSVKEDINV S+FRYL TKC
Sbjct: 143 NEIPTVIVQNKIDLIEQAVVSADEVETLAKMLNCRLIRTSVKEDINVASVFRYLATKCHQ 202
Query: 188 ELRQQEEEYSINGNGL------PPYT 207
+ Q ++ + N PPY+
Sbjct: 203 LMTQTYDQVYGSNNSTQQATTHPPYS 228
Score = 89.7 bits (221), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 40/54 (74%), Positives = 45/54 (83%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 60
+GE+VR+MLWDTAGQEEFD ITKAYYRGAQA V+ FST DR SF+A WK KV
Sbjct: 85 DGEDVRIMLWDTAGQEEFDCITKAYYRGAQASVLVFSTTDRASFDAIKEWKRKV 138
>gi|195502070|ref|XP_002098062.1| Rab23 [Drosophila yakuba]
gi|194184163|gb|EDW97774.1| Rab23 [Drosophila yakuba]
Length = 268
Score = 185 bits (470), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 88/142 (61%), Positives = 109/142 (76%), Gaps = 2/142 (1%)
Query: 68 ECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENEC 127
E +GE+VR+MLWDTAGQEEFD ITKAYYRGAQA V+ FST DR SF+A WK KVENEC
Sbjct: 80 EIDGEDVRIMLWDTAGQEEFDCITKAYYRGAQASVLVFSTTDRASFDAIKEWKRKVENEC 139
Query: 128 GEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLS 187
EIPTV+VQNKIDL++Q+VV +E + L++ L CRL+RTSVKEDINV S+FRYL TKC
Sbjct: 140 NEIPTVIVQNKIDLIEQAVVTADEVETLAKLLNCRLIRTSVKEDINVASVFRYLATKCHQ 199
Query: 188 ELRQQEEEYSIN--GNGLPPYT 207
+ Q ++ + N + P Y+
Sbjct: 200 IMTQSYDQAAGNQQNSSHPSYS 221
>gi|66472226|ref|NP_001018579.1| ras-related protein Rab-23 [Danio rerio]
gi|63102386|gb|AAH95213.1| RAB23, member RAS oncogene family [Danio rerio]
gi|182889236|gb|AAI64825.1| Rab23 protein [Danio rerio]
Length = 237
Score = 183 bits (465), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 88/125 (70%), Positives = 101/125 (80%)
Query: 71 GEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGEI 130
GE+VRLMLWDTAGQEEFDAITKAYYRGAQACV+ FST DR+SFEA SWK KVE E G+I
Sbjct: 55 GEDVRLMLWDTAGQEEFDAITKAYYRGAQACVLVFSTTDRESFEAISSWKEKVEMEVGDI 114
Query: 131 PTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSELR 190
PTVLVQNKIDLLD +V+ EEA+ L++ L R RTSVKED+NVN +F+YL K L L+
Sbjct: 115 PTVLVQNKIDLLDDTVIKNEEAEGLAKRLKLRFYRTSVKEDLNVNEVFKYLADKYLQRLK 174
Query: 191 QQEEE 195
QQ E
Sbjct: 175 QQSAE 179
Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 46/58 (79%), Positives = 50/58 (86%)
Query: 5 ICEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVSI 62
I GE+VRLMLWDTAGQEEFDAITKAYYRGAQACV+ FST DR+SFEA SWK KV +
Sbjct: 52 IVNGEDVRLMLWDTAGQEEFDAITKAYYRGAQACVLVFSTTDRESFEAISSWKEKVEM 109
>gi|321463482|gb|EFX74498.1| hypothetical protein DAPPUDRAFT_199917 [Daphnia pulex]
Length = 197
Score = 182 bits (462), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 88/124 (70%), Positives = 102/124 (82%)
Query: 66 IKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVEN 125
I E EEVRLMLWDTAGQEEFDAITKAYYRGAQA V+ FST+DR SF+A SWK KVE+
Sbjct: 50 IIEVNCEEVRLMLWDTAGQEEFDAITKAYYRGAQAAVLAFSTVDRVSFDAIRSWKKKVED 109
Query: 126 ECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLTTKC 185
ECGEIP V+VQNKIDL+DQ+VV EE ++L+R L CRL RTSVKED+NV +F+YL K
Sbjct: 110 ECGEIPMVIVQNKIDLVDQAVVDAEEVEMLARELHCRLYRTSVKEDLNVRQVFQYLAEKY 169
Query: 186 LSEL 189
LS+L
Sbjct: 170 LSQL 173
Score = 93.2 bits (230), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 43/52 (82%), Positives = 46/52 (88%)
Query: 9 EEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 60
EEVRLMLWDTAGQEEFDAITKAYYRGAQA V+ FST+DR SF+A SWK KV
Sbjct: 56 EEVRLMLWDTAGQEEFDAITKAYYRGAQAAVLAFSTVDRVSFDAIRSWKKKV 107
>gi|348507000|ref|XP_003441045.1| PREDICTED: ras-related protein Rab-23-like [Oreochromis niloticus]
Length = 235
Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 86/124 (69%), Positives = 100/124 (80%)
Query: 72 EEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGEIP 131
EEVRLMLWDTAGQEEFDAITKAYYRGAQACV+ FST DRDSF+A SWK KVE E G+IP
Sbjct: 56 EEVRLMLWDTAGQEEFDAITKAYYRGAQACVLVFSTTDRDSFQAIDSWKEKVEAEVGDIP 115
Query: 132 TVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSELRQ 191
TVLVQNKIDLL+++V+ EEA+ L++ L R R SVKED+NVN +F+YL K L L+Q
Sbjct: 116 TVLVQNKIDLLEETVIKNEEAEALAKRLKLRFYRASVKEDLNVNEVFKYLAEKYLQRLKQ 175
Query: 192 QEEE 195
Q E
Sbjct: 176 QTAE 179
Score = 100 bits (248), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 45/56 (80%), Positives = 48/56 (85%)
Query: 5 ICEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 60
+ EEVRLMLWDTAGQEEFDAITKAYYRGAQACV+ FST DRDSF+A SWK KV
Sbjct: 52 LVNDEEVRLMLWDTAGQEEFDAITKAYYRGAQACVLVFSTTDRDSFQAIDSWKEKV 107
>gi|348588989|ref|XP_003480247.1| PREDICTED: ras-related protein Rab-23-like [Cavia porcellus]
Length = 236
Score = 180 bits (456), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 86/121 (71%), Positives = 99/121 (81%)
Query: 72 EEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGEIP 131
E+VRLMLWDTAGQEEFDAITKAYYRGAQACV+ FSTIDR+SFEA SW+ KV E GEIP
Sbjct: 56 EDVRLMLWDTAGQEEFDAITKAYYRGAQACVLVFSTIDRESFEAVSSWREKVVAEVGEIP 115
Query: 132 TVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSELRQ 191
TVLVQNKIDLLD S + EEA+ L++ L R RTSVKED+NVN +F+YL K L +L+Q
Sbjct: 116 TVLVQNKIDLLDDSCIKNEEAEALAKRLKLRFYRTSVKEDLNVNEVFKYLAEKYLQKLKQ 175
Query: 192 Q 192
Q
Sbjct: 176 Q 176
Score = 99.4 bits (246), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 44/52 (84%), Positives = 48/52 (92%)
Query: 9 EEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 60
E+VRLMLWDTAGQEEFDAITKAYYRGAQACV+ FSTIDR+SFEA SW+ KV
Sbjct: 56 EDVRLMLWDTAGQEEFDAITKAYYRGAQACVLVFSTIDRESFEAVSSWREKV 107
>gi|291225856|ref|XP_002732916.1| PREDICTED: RAS oncogene protein-like [Saccoglossus kowalevskii]
Length = 234
Score = 179 bits (455), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 84/128 (65%), Positives = 102/128 (79%)
Query: 68 ECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENEC 127
E GEEVRLMLWDTAGQEEFDAITK+YYRGAQACV+ FST+DR SF+A SWK KVE+E
Sbjct: 52 EISGEEVRLMLWDTAGQEEFDAITKSYYRGAQACVLAFSTVDRASFDAVESWKKKVEDEV 111
Query: 128 GEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLS 187
G IP VLVQNKIDL+D +++ EEAD L++ L R RTSVKED+NVN +FRYL+ + L+
Sbjct: 112 GNIPMVLVQNKIDLVDNALIDHEEADALAKKLKLRFYRTSVKEDLNVNDVFRYLSDRYLA 171
Query: 188 ELRQQEEE 195
++ E E
Sbjct: 172 RIQNCEAE 179
Score = 99.4 bits (246), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 44/53 (83%), Positives = 48/53 (90%)
Query: 8 GEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 60
GEEVRLMLWDTAGQEEFDAITK+YYRGAQACV+ FST+DR SF+A SWK KV
Sbjct: 55 GEEVRLMLWDTAGQEEFDAITKSYYRGAQACVLAFSTVDRASFDAVESWKKKV 107
>gi|403268709|ref|XP_003926411.1| PREDICTED: ras-related protein Rab-23 isoform 1 [Saimiri
boliviensis boliviensis]
gi|403268711|ref|XP_003926412.1| PREDICTED: ras-related protein Rab-23 isoform 2 [Saimiri
boliviensis boliviensis]
gi|403268713|ref|XP_003926413.1| PREDICTED: ras-related protein Rab-23 isoform 3 [Saimiri
boliviensis boliviensis]
Length = 237
Score = 178 bits (452), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 86/124 (69%), Positives = 100/124 (80%)
Query: 72 EEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGEIP 131
E+VRLMLWDTAGQEEFDAITKAYYRGAQACV+ FSTIDR+SFEA SW+ KV E G+IP
Sbjct: 56 EDVRLMLWDTAGQEEFDAITKAYYRGAQACVLVFSTIDRESFEAVSSWREKVVAEVGDIP 115
Query: 132 TVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSELRQ 191
TVLVQNKIDLLD S + EEA+ L++ L R RTSVKED+NVN +F+YL K L +L+Q
Sbjct: 116 TVLVQNKIDLLDDSCIKNEEAEALAKRLKLRFYRTSVKEDLNVNEVFKYLAEKYLQKLKQ 175
Query: 192 QEEE 195
Q E
Sbjct: 176 QVAE 179
Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 44/52 (84%), Positives = 48/52 (92%)
Query: 9 EEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 60
E+VRLMLWDTAGQEEFDAITKAYYRGAQACV+ FSTIDR+SFEA SW+ KV
Sbjct: 56 EDVRLMLWDTAGQEEFDAITKAYYRGAQACVLVFSTIDRESFEAVSSWREKV 107
>gi|432904028|ref|XP_004077248.1| PREDICTED: ras-related protein Rab-23-like [Oryzias latipes]
Length = 235
Score = 177 bits (449), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 82/125 (65%), Positives = 101/125 (80%)
Query: 71 GEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGEI 130
GE+VRL+LWDTAGQEEFDAITKAYYRGAQACV+ FST DR+SF++ +WK KVE E G++
Sbjct: 55 GEDVRLLLWDTAGQEEFDAITKAYYRGAQACVLVFSTTDRESFQSIQTWKEKVEAEVGDV 114
Query: 131 PTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSELR 190
PTVLVQNKIDLL+++V+ EEA+ L++ L R RTSVKED+NV +FRYL K L L+
Sbjct: 115 PTVLVQNKIDLLEETVIKNEEAEALAKRLKLRFYRTSVKEDLNVTEVFRYLADKYLQRLK 174
Query: 191 QQEEE 195
QQ E
Sbjct: 175 QQTAE 179
Score = 96.3 bits (238), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 41/53 (77%), Positives = 48/53 (90%)
Query: 8 GEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 60
GE+VRL+LWDTAGQEEFDAITKAYYRGAQACV+ FST DR+SF++ +WK KV
Sbjct: 55 GEDVRLLLWDTAGQEEFDAITKAYYRGAQACVLVFSTTDRESFQSIQTWKEKV 107
>gi|241652325|ref|XP_002410387.1| RAB-23, putative [Ixodes scapularis]
gi|215501615|gb|EEC11109.1| RAB-23, putative [Ixodes scapularis]
Length = 233
Score = 176 bits (447), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 85/135 (62%), Positives = 101/135 (74%), Gaps = 2/135 (1%)
Query: 71 GEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGEI 130
GE+VRLMLWDTAGQEEFDAITKAYYRGAQACV+ FS+ DR SF A +W+ KVENECG I
Sbjct: 55 GEDVRLMLWDTAGQEEFDAITKAYYRGAQACVVAFSSTDRQSFGAVEAWRKKVENECGSI 114
Query: 131 PTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSELR 190
P V+VQNKIDL+D++ V+ EE + L+R + RL RTSVKED NVN +FRYL K L ++
Sbjct: 115 PMVIVQNKIDLMDRATVSKEETEELARRMQLRLYRTSVKEDFNVNEVFRYLAEKYLDQMN 174
Query: 191 QQEEEY--SINGNGL 203
EE N GL
Sbjct: 175 NPVEELMRGPNSKGL 189
>gi|114607987|ref|XP_527422.2| PREDICTED: uncharacterized protein LOC472043 isoform 2 [Pan
troglodytes]
gi|114607989|ref|XP_001158655.1| PREDICTED: uncharacterized protein LOC472043 isoform 1 [Pan
troglodytes]
gi|297678432|ref|XP_002817078.1| PREDICTED: ras-related protein Rab-23 isoform 1 [Pongo abelii]
gi|332210124|ref|XP_003254155.1| PREDICTED: ras-related protein Rab-23 isoform 1 [Nomascus
leucogenys]
gi|332210126|ref|XP_003254156.1| PREDICTED: ras-related protein Rab-23 isoform 2 [Nomascus
leucogenys]
gi|395737380|ref|XP_003776909.1| PREDICTED: ras-related protein Rab-23 isoform 2 [Pongo abelii]
gi|441667738|ref|XP_004092001.1| PREDICTED: ras-related protein Rab-23 [Nomascus leucogenys]
gi|20379078|gb|AAM21099.1|AF498951_1 small GTP binding protein RAB23 [Homo sapiens]
gi|189054025|dbj|BAG36532.1| unnamed protein product [Homo sapiens]
gi|410227584|gb|JAA11011.1| RAB23, member RAS oncogene family [Pan troglodytes]
gi|410227586|gb|JAA11012.1| RAB23, member RAS oncogene family [Pan troglodytes]
gi|410246804|gb|JAA11369.1| RAB23, member RAS oncogene family [Pan troglodytes]
gi|410292298|gb|JAA24749.1| RAB23, member RAS oncogene family [Pan troglodytes]
gi|410292300|gb|JAA24750.1| RAB23, member RAS oncogene family [Pan troglodytes]
gi|410331083|gb|JAA34488.1| RAB23, member RAS oncogene family [Pan troglodytes]
Length = 237
Score = 176 bits (447), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 84/121 (69%), Positives = 98/121 (80%)
Query: 72 EEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGEIP 131
E+VRLMLWDTAGQEEFDAITKAYYRGAQACV+ FST DR+SFEA SW+ KV E G+IP
Sbjct: 56 EDVRLMLWDTAGQEEFDAITKAYYRGAQACVLVFSTTDRESFEAVSSWREKVVAEVGDIP 115
Query: 132 TVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSELRQ 191
TVLVQNKIDLLD S + EEA+ L++ L R RTSVKED+NVN +F+YL K L +L+Q
Sbjct: 116 TVLVQNKIDLLDDSCIKNEEAEALAKRLKLRFYRTSVKEDLNVNEVFKYLAEKYLQKLKQ 175
Query: 192 Q 192
Q
Sbjct: 176 Q 176
Score = 97.1 bits (240), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 43/52 (82%), Positives = 47/52 (90%)
Query: 9 EEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 60
E+VRLMLWDTAGQEEFDAITKAYYRGAQACV+ FST DR+SFEA SW+ KV
Sbjct: 56 EDVRLMLWDTAGQEEFDAITKAYYRGAQACVLVFSTTDRESFEAVSSWREKV 107
>gi|387762850|ref|NP_001248670.1| ras-related protein Rab-23 [Macaca mulatta]
gi|402867347|ref|XP_003897819.1| PREDICTED: ras-related protein Rab-23 isoform 1 [Papio anubis]
gi|402867349|ref|XP_003897820.1| PREDICTED: ras-related protein Rab-23 isoform 2 [Papio anubis]
gi|402867351|ref|XP_003897821.1| PREDICTED: ras-related protein Rab-23 isoform 3 [Papio anubis]
gi|355748665|gb|EHH53148.1| hypothetical protein EGM_13724 [Macaca fascicularis]
gi|380787357|gb|AFE65554.1| ras-related protein Rab-23 [Macaca mulatta]
gi|383419125|gb|AFH32776.1| ras-related protein Rab-23 [Macaca mulatta]
Length = 237
Score = 176 bits (447), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 84/121 (69%), Positives = 98/121 (80%)
Query: 72 EEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGEIP 131
E+VRLMLWDTAGQEEFDAITKAYYRGAQACV+ FST DR+SFEA SW+ KV E G+IP
Sbjct: 56 EDVRLMLWDTAGQEEFDAITKAYYRGAQACVLVFSTTDRESFEAVSSWREKVVAEVGDIP 115
Query: 132 TVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSELRQ 191
TVLVQNKIDLLD S + EEA+ L++ L R RTSVKED+NVN +F+YL K L +L+Q
Sbjct: 116 TVLVQNKIDLLDDSCIKNEEAEALAKRLKLRFYRTSVKEDLNVNEVFKYLAEKYLQKLKQ 175
Query: 192 Q 192
Q
Sbjct: 176 Q 176
Score = 97.1 bits (240), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 43/52 (82%), Positives = 47/52 (90%)
Query: 9 EEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 60
E+VRLMLWDTAGQEEFDAITKAYYRGAQACV+ FST DR+SFEA SW+ KV
Sbjct: 56 EDVRLMLWDTAGQEEFDAITKAYYRGAQACVLVFSTTDRESFEAVSSWREKV 107
>gi|224048591|ref|XP_002194341.1| PREDICTED: ras-related protein Rab-23 [Taeniopygia guttata]
Length = 237
Score = 176 bits (447), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 84/130 (64%), Positives = 101/130 (77%)
Query: 68 ECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENEC 127
+ GE+VRLMLWDTAGQEEFDAITKAYYRGAQACV+ FST DR+SF+A +WK KV E
Sbjct: 52 QVNGEDVRLMLWDTAGQEEFDAITKAYYRGAQACVLVFSTTDRESFKAIPTWKQKVVTEV 111
Query: 128 GEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLS 187
G+IPTVLVQNKIDLLD S + EEA+ L++ L R R SVKED+NV+ +F+YL K L
Sbjct: 112 GDIPTVLVQNKIDLLDDSCIKNEEAEALAKKLKVRFYRASVKEDLNVSEVFKYLADKYLQ 171
Query: 188 ELRQQEEEYS 197
+L+QQ E S
Sbjct: 172 KLKQQTAEDS 181
Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 43/53 (81%), Positives = 48/53 (90%)
Query: 8 GEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 60
GE+VRLMLWDTAGQEEFDAITKAYYRGAQACV+ FST DR+SF+A +WK KV
Sbjct: 55 GEDVRLMLWDTAGQEEFDAITKAYYRGAQACVLVFSTTDRESFKAIPTWKQKV 107
>gi|34485714|ref|NP_057361.3| ras-related protein Rab-23 [Homo sapiens]
gi|34485716|ref|NP_899050.1| ras-related protein Rab-23 [Homo sapiens]
gi|12643897|sp|Q9ULC3.1|RAB23_HUMAN RecName: Full=Ras-related protein Rab-23; Flags: Precursor
gi|6475048|dbj|BAA87324.1| RAB23 protein [Homo sapiens]
gi|13516443|dbj|BAB40309.1| hRAB-23 protein [Homo sapiens]
gi|21955336|gb|AAH15021.1| RAB23, member RAS oncogene family [Homo sapiens]
gi|50612562|gb|AAT79492.1| RAB family small GTP binding protein RAB 23 [Homo sapiens]
gi|51476468|emb|CAH18224.1| hypothetical protein [Homo sapiens]
gi|119624881|gb|EAX04476.1| RAB23, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|119624883|gb|EAX04478.1| RAB23, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|119624884|gb|EAX04479.1| RAB23, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|190690197|gb|ACE86873.1| RAB23, member RAS oncogene family protein [synthetic construct]
gi|190691573|gb|ACE87561.1| RAB23, member RAS oncogene family protein [synthetic construct]
gi|261861474|dbj|BAI47259.1| RAB23, member RAS oncogene family [synthetic construct]
Length = 237
Score = 176 bits (447), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 84/121 (69%), Positives = 98/121 (80%)
Query: 72 EEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGEIP 131
E+VRLMLWDTAGQEEFDAITKAYYRGAQACV+ FST DR+SFEA SW+ KV E G+IP
Sbjct: 56 EDVRLMLWDTAGQEEFDAITKAYYRGAQACVLVFSTTDRESFEAVSSWREKVVAEVGDIP 115
Query: 132 TVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSELRQ 191
TVLVQNKIDLLD S + EEA+ L++ L R RTSVKED+NVN +F+YL K L +L+Q
Sbjct: 116 TVLVQNKIDLLDDSCIKNEEAEALAKRLKLRFYRTSVKEDLNVNEVFKYLAEKYLQKLKQ 175
Query: 192 Q 192
Q
Sbjct: 176 Q 176
Score = 97.1 bits (240), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 43/52 (82%), Positives = 47/52 (90%)
Query: 9 EEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 60
E+VRLMLWDTAGQEEFDAITKAYYRGAQACV+ FST DR+SFEA SW+ KV
Sbjct: 56 EDVRLMLWDTAGQEEFDAITKAYYRGAQACVLVFSTTDRESFEAVSSWREKV 107
>gi|397517533|ref|XP_003828964.1| PREDICTED: ras-related protein Rab-23 [Pan paniscus]
gi|397517535|ref|XP_003828965.1| PREDICTED: ras-related protein Rab-23 [Pan paniscus]
gi|397517537|ref|XP_003828966.1| PREDICTED: ras-related protein Rab-23 [Pan paniscus]
Length = 237
Score = 176 bits (447), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 84/121 (69%), Positives = 98/121 (80%)
Query: 72 EEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGEIP 131
E+VRLMLWDTAGQEEFDAITKAYYRGAQACV+ FST DR+SFEA SW+ KV E G+IP
Sbjct: 56 EDVRLMLWDTAGQEEFDAITKAYYRGAQACVLVFSTTDRESFEAVSSWREKVVAEVGDIP 115
Query: 132 TVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSELRQ 191
TVLVQNKIDLLD S + EEA+ L++ L R RTSVKED+NVN +F+YL K L +L+Q
Sbjct: 116 TVLVQNKIDLLDDSCIKNEEAEALAKRLKLRFYRTSVKEDLNVNEVFKYLAEKYLQKLKQ 175
Query: 192 Q 192
Q
Sbjct: 176 Q 176
Score = 97.1 bits (240), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 43/52 (82%), Positives = 47/52 (90%)
Query: 9 EEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 60
E+VRLMLWDTAGQEEFDAITKAYYRGAQACV+ FST DR+SFEA SW+ KV
Sbjct: 56 EDVRLMLWDTAGQEEFDAITKAYYRGAQACVLVFSTTDRESFEAVSSWREKV 107
>gi|296198485|ref|XP_002746722.1| PREDICTED: ras-related protein Rab-23-like [Callithrix jacchus]
Length = 237
Score = 176 bits (447), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 84/121 (69%), Positives = 98/121 (80%)
Query: 72 EEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGEIP 131
E+VRLMLWDTAGQEEFDAITKAYYRGAQACV+ FST DR+SFEA SW+ KV E G+IP
Sbjct: 56 EDVRLMLWDTAGQEEFDAITKAYYRGAQACVLVFSTTDRESFEAVSSWREKVVAEVGDIP 115
Query: 132 TVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSELRQ 191
TVLVQNKIDLLD S + EEA+ L++ L R RTSVKED+NVN +F+YL K L +L+Q
Sbjct: 116 TVLVQNKIDLLDDSCIKNEEAEALAKRLKLRFYRTSVKEDLNVNEVFKYLAEKYLQKLKQ 175
Query: 192 Q 192
Q
Sbjct: 176 Q 176
Score = 97.1 bits (240), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 43/52 (82%), Positives = 47/52 (90%)
Query: 9 EEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 60
E+VRLMLWDTAGQEEFDAITKAYYRGAQACV+ FST DR+SFEA SW+ KV
Sbjct: 56 EDVRLMLWDTAGQEEFDAITKAYYRGAQACVLVFSTTDRESFEAVSSWREKV 107
>gi|194040262|ref|XP_001929671.1| PREDICTED: ras-related protein Rab-23-like [Sus scrofa]
Length = 237
Score = 176 bits (445), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 83/125 (66%), Positives = 99/125 (79%)
Query: 68 ECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENEC 127
+ E+VRLMLWDTAGQEEFDAITKAYYRGAQACV+ FST DR+SFEA SW+ KV E
Sbjct: 52 QVHDEDVRLMLWDTAGQEEFDAITKAYYRGAQACVLVFSTTDRESFEAISSWREKVVAEV 111
Query: 128 GEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLS 187
G++PTVLVQNKIDLLD S + EEA+ L++ L R RTSVKED+NVN +F+YL K L
Sbjct: 112 GDVPTVLVQNKIDLLDDSCIKNEEAEALAKKLKLRFYRTSVKEDLNVNEVFKYLAEKYLQ 171
Query: 188 ELRQQ 192
+L+QQ
Sbjct: 172 KLKQQ 176
Score = 96.3 bits (238), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 43/52 (82%), Positives = 47/52 (90%)
Query: 9 EEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 60
E+VRLMLWDTAGQEEFDAITKAYYRGAQACV+ FST DR+SFEA SW+ KV
Sbjct: 56 EDVRLMLWDTAGQEEFDAITKAYYRGAQACVLVFSTTDRESFEAISSWREKV 107
>gi|291396430|ref|XP_002714566.1| PREDICTED: Rab23-like [Oryctolagus cuniculus]
Length = 237
Score = 176 bits (445), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 84/121 (69%), Positives = 98/121 (80%)
Query: 72 EEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGEIP 131
E+VRLMLWDTAGQEEFDAITKAYYRGAQACV+ FST DR+SFEA SW+ KV E G+IP
Sbjct: 56 EDVRLMLWDTAGQEEFDAITKAYYRGAQACVLVFSTTDRESFEAISSWREKVVAEVGDIP 115
Query: 132 TVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSELRQ 191
TVLVQNKIDLLD S + EEA+ L++ L R RTSVKED+NVN +F+YL K L +L+Q
Sbjct: 116 TVLVQNKIDLLDDSCIKNEEAEALAKRLKLRFYRTSVKEDLNVNEVFKYLAEKYLQKLKQ 175
Query: 192 Q 192
Q
Sbjct: 176 Q 176
Score = 96.7 bits (239), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 43/52 (82%), Positives = 47/52 (90%)
Query: 9 EEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 60
E+VRLMLWDTAGQEEFDAITKAYYRGAQACV+ FST DR+SFEA SW+ KV
Sbjct: 56 EDVRLMLWDTAGQEEFDAITKAYYRGAQACVLVFSTTDRESFEAISSWREKV 107
>gi|344264766|ref|XP_003404461.1| PREDICTED: ras-related protein Rab-23-like [Loxodonta africana]
Length = 237
Score = 176 bits (445), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 84/121 (69%), Positives = 98/121 (80%)
Query: 72 EEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGEIP 131
E+VRLMLWDTAGQEEFDAITKAYYRGAQACV+ FST DR+SFEA SW+ KV E G+IP
Sbjct: 56 EDVRLMLWDTAGQEEFDAITKAYYRGAQACVLVFSTTDRESFEAIPSWREKVVAEVGDIP 115
Query: 132 TVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSELRQ 191
TVLVQNKIDLLD S + EEA+ L++ L R RTSVKED+NVN +F+YL K L +L+Q
Sbjct: 116 TVLVQNKIDLLDDSCIKNEEAEALAKRLKLRFYRTSVKEDLNVNEVFKYLAEKYLQKLKQ 175
Query: 192 Q 192
Q
Sbjct: 176 Q 176
Score = 96.3 bits (238), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 43/52 (82%), Positives = 47/52 (90%)
Query: 9 EEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 60
E+VRLMLWDTAGQEEFDAITKAYYRGAQACV+ FST DR+SFEA SW+ KV
Sbjct: 56 EDVRLMLWDTAGQEEFDAITKAYYRGAQACVLVFSTTDRESFEAIPSWREKV 107
>gi|351694617|gb|EHA97535.1| Ras-related protein Rab-23 [Heterocephalus glaber]
Length = 237
Score = 175 bits (444), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 85/124 (68%), Positives = 99/124 (79%)
Query: 72 EEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGEIP 131
E+VRLMLWDTAGQEEFDAITKAYYRGAQACV+ FST DR+SFEA SW+ KV E GEIP
Sbjct: 56 EDVRLMLWDTAGQEEFDAITKAYYRGAQACVLVFSTTDRESFEAISSWREKVVAEVGEIP 115
Query: 132 TVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSELRQ 191
TVLVQNKIDLLD S + EEA+ L++ L R RTSVKED+NV+ +F+YL K L +L+Q
Sbjct: 116 TVLVQNKIDLLDDSCIKNEEAEALAKRLKLRFYRTSVKEDLNVSEVFKYLAEKYLQKLKQ 175
Query: 192 QEEE 195
Q E
Sbjct: 176 QTAE 179
Score = 96.3 bits (238), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 43/52 (82%), Positives = 47/52 (90%)
Query: 9 EEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 60
E+VRLMLWDTAGQEEFDAITKAYYRGAQACV+ FST DR+SFEA SW+ KV
Sbjct: 56 EDVRLMLWDTAGQEEFDAITKAYYRGAQACVLVFSTTDRESFEAISSWREKV 107
>gi|395833379|ref|XP_003789715.1| PREDICTED: ras-related protein Rab-23 isoform 1 [Otolemur
garnettii]
gi|395833381|ref|XP_003789716.1| PREDICTED: ras-related protein Rab-23 isoform 2 [Otolemur
garnettii]
Length = 237
Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 84/124 (67%), Positives = 99/124 (79%)
Query: 72 EEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGEIP 131
E+VRLMLWDTAGQEEFDAITKAYYRGAQACV+ FST DR+SFEA SW+ KV E G+IP
Sbjct: 56 EDVRLMLWDTAGQEEFDAITKAYYRGAQACVLVFSTTDRESFEAVSSWREKVVAEVGDIP 115
Query: 132 TVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSELRQ 191
+VLVQNKIDLLD S + EEA+ L++ L R RTSVKED+NVN +F+YL K L +L+Q
Sbjct: 116 SVLVQNKIDLLDDSCIKNEEAEALAKRLKLRFYRTSVKEDLNVNEVFKYLAEKYLQKLKQ 175
Query: 192 QEEE 195
Q E
Sbjct: 176 QVAE 179
Score = 97.1 bits (240), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 43/52 (82%), Positives = 47/52 (90%)
Query: 9 EEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 60
E+VRLMLWDTAGQEEFDAITKAYYRGAQACV+ FST DR+SFEA SW+ KV
Sbjct: 56 EDVRLMLWDTAGQEEFDAITKAYYRGAQACVLVFSTTDRESFEAVSSWREKV 107
>gi|6841496|gb|AAF29101.1|AF161486_1 HSPC137 [Homo sapiens]
Length = 237
Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 84/121 (69%), Positives = 97/121 (80%)
Query: 72 EEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGEIP 131
E+VRLMLWDTAGQEEFDAITKAYYRGAQACV+ FST DR SFEA SW+ KV E G+IP
Sbjct: 56 EDVRLMLWDTAGQEEFDAITKAYYRGAQACVLVFSTTDRGSFEAVSSWREKVVAEVGDIP 115
Query: 132 TVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSELRQ 191
TVLVQNKIDLLD S + EEA+ L++ L R RTSVKED+NVN +F+YL K L +L+Q
Sbjct: 116 TVLVQNKIDLLDDSCIKNEEAEALAKRLRLRFYRTSVKEDLNVNEVFKYLAEKYLQKLKQ 175
Query: 192 Q 192
Q
Sbjct: 176 Q 176
Score = 96.3 bits (238), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 43/52 (82%), Positives = 46/52 (88%)
Query: 9 EEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 60
E+VRLMLWDTAGQEEFDAITKAYYRGAQACV+ FST DR SFEA SW+ KV
Sbjct: 56 EDVRLMLWDTAGQEEFDAITKAYYRGAQACVLVFSTTDRGSFEAVSSWREKV 107
>gi|47228917|emb|CAG09432.1| unnamed protein product [Tetraodon nigroviridis]
Length = 231
Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 83/127 (65%), Positives = 101/127 (79%)
Query: 72 EEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGEIP 131
E+VRLMLWDTAGQEEFDAITKAYYRGAQACV+ FST DR+SF+A SW+ KVE E G++P
Sbjct: 56 EDVRLMLWDTAGQEEFDAITKAYYRGAQACVLVFSTTDRESFQAIDSWREKVEAEVGDVP 115
Query: 132 TVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSELRQ 191
TVLVQNKIDLL+++V+ EEA+ L++ L R RTSVKED+NV +F+YL K L LRQ
Sbjct: 116 TVLVQNKIDLLEETVIKNEEAEALAKRLKLRFYRTSVKEDLNVIEVFKYLAEKYLQRLRQ 175
Query: 192 QEEEYSI 198
Q E +
Sbjct: 176 QAAETEV 182
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 42/56 (75%), Positives = 48/56 (85%)
Query: 5 ICEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 60
+ E+VRLMLWDTAGQEEFDAITKAYYRGAQACV+ FST DR+SF+A SW+ KV
Sbjct: 52 VVNDEDVRLMLWDTAGQEEFDAITKAYYRGAQACVLVFSTTDRESFQAIDSWREKV 107
>gi|432112846|gb|ELK35442.1| Ras-related protein Rab-23 [Myotis davidii]
Length = 236
Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 84/124 (67%), Positives = 99/124 (79%)
Query: 72 EEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGEIP 131
E+VRLMLWDTAGQEEFDAITKAYYRGAQACV+ FST DR+SFEA SW+ KV E G+IP
Sbjct: 56 EDVRLMLWDTAGQEEFDAITKAYYRGAQACVLVFSTTDRESFEAISSWREKVVAEVGDIP 115
Query: 132 TVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSELRQ 191
TVLVQNKIDLLD S + EEA+ L++ L R RTSVKED+NVN +F+YL K L +L+Q
Sbjct: 116 TVLVQNKIDLLDDSCIKNEEAEALAKKLKLRFYRTSVKEDLNVNEVFKYLAEKYLQKLKQ 175
Query: 192 QEEE 195
E+
Sbjct: 176 VAED 179
Score = 96.3 bits (238), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 43/52 (82%), Positives = 47/52 (90%)
Query: 9 EEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 60
E+VRLMLWDTAGQEEFDAITKAYYRGAQACV+ FST DR+SFEA SW+ KV
Sbjct: 56 EDVRLMLWDTAGQEEFDAITKAYYRGAQACVLVFSTTDRESFEAISSWREKV 107
>gi|344257913|gb|EGW14017.1| Ras-related protein Rab-23 [Cricetulus griseus]
Length = 236
Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 83/121 (68%), Positives = 98/121 (80%)
Query: 72 EEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGEIP 131
E+VRLMLWDTAGQEEFDAITKAYYRGAQACV+ FST DR+SFEA SW+ KV E G+IP
Sbjct: 55 EDVRLMLWDTAGQEEFDAITKAYYRGAQACVLVFSTTDRESFEAISSWREKVVAEVGDIP 114
Query: 132 TVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSELRQ 191
TVLVQNKIDLLD + + EEA+ L++ L R RTSVKED+NVN +F+YL K L +L+Q
Sbjct: 115 TVLVQNKIDLLDDTCIKNEEAEALAKRLKLRFYRTSVKEDLNVNEVFKYLAEKHLQKLKQ 174
Query: 192 Q 192
Q
Sbjct: 175 Q 175
Score = 96.3 bits (238), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 43/52 (82%), Positives = 47/52 (90%)
Query: 9 EEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 60
E+VRLMLWDTAGQEEFDAITKAYYRGAQACV+ FST DR+SFEA SW+ KV
Sbjct: 55 EDVRLMLWDTAGQEEFDAITKAYYRGAQACVLVFSTTDRESFEAISSWREKV 106
>gi|260787333|ref|XP_002588708.1| RAS oncogene protein [Branchiostoma floridae]
gi|229273876|gb|EEN44719.1| RAS oncogene protein [Branchiostoma floridae]
Length = 237
Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 83/128 (64%), Positives = 100/128 (78%)
Query: 68 ECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENEC 127
E E++RLMLWDTAGQEEFDAITKAYYRGAQACV+ FST DR SFEA SWK KVE+EC
Sbjct: 52 EVNNEDIRLMLWDTAGQEEFDAITKAYYRGAQACVLVFSTTDRQSFEAIESWKGKVEDEC 111
Query: 128 GEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLS 187
G+IPTVLVQNKIDL++ + V EEAD L++ L R RTSVK+++NV+ +FRYL K L
Sbjct: 112 GDIPTVLVQNKIDLVEDAKVETEEADTLAKKLKLRFYRTSVKDNLNVDDVFRYLADKYLE 171
Query: 188 ELRQQEEE 195
++ EE
Sbjct: 172 RVQAMVEE 179
Score = 96.3 bits (238), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 43/53 (81%), Positives = 46/53 (86%)
Query: 8 GEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 60
E++RLMLWDTAGQEEFDAITKAYYRGAQACV+ FST DR SFEA SWK KV
Sbjct: 55 NEDIRLMLWDTAGQEEFDAITKAYYRGAQACVLVFSTTDRQSFEAIESWKGKV 107
>gi|354491629|ref|XP_003507957.1| PREDICTED: ras-related protein Rab-23-like [Cricetulus griseus]
Length = 237
Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 83/121 (68%), Positives = 98/121 (80%)
Query: 72 EEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGEIP 131
E+VRLMLWDTAGQEEFDAITKAYYRGAQACV+ FST DR+SFEA SW+ KV E G+IP
Sbjct: 56 EDVRLMLWDTAGQEEFDAITKAYYRGAQACVLVFSTTDRESFEAISSWREKVVAEVGDIP 115
Query: 132 TVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSELRQ 191
TVLVQNKIDLLD + + EEA+ L++ L R RTSVKED+NVN +F+YL K L +L+Q
Sbjct: 116 TVLVQNKIDLLDDTCIKNEEAEALAKRLKLRFYRTSVKEDLNVNEVFKYLAEKHLQKLKQ 175
Query: 192 Q 192
Q
Sbjct: 176 Q 176
Score = 96.3 bits (238), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 43/52 (82%), Positives = 47/52 (90%)
Query: 9 EEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 60
E+VRLMLWDTAGQEEFDAITKAYYRGAQACV+ FST DR+SFEA SW+ KV
Sbjct: 56 EDVRLMLWDTAGQEEFDAITKAYYRGAQACVLVFSTTDRESFEAISSWREKV 107
>gi|410901324|ref|XP_003964146.1| PREDICTED: ras-related protein Rab-23-like [Takifugu rubripes]
Length = 234
Score = 174 bits (442), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 83/127 (65%), Positives = 100/127 (78%)
Query: 72 EEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGEIP 131
EEVRLMLWDTAGQEEFDAITKAYYRGAQACV+ FST DR+SF+A SW+ KVE E G++P
Sbjct: 56 EEVRLMLWDTAGQEEFDAITKAYYRGAQACVLVFSTTDRESFQAIDSWREKVEAEVGDVP 115
Query: 132 TVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSELRQ 191
TVLVQNKIDLL+++V+ EEA+ L++ L R R SVKED+NVN +F+ L K L LRQ
Sbjct: 116 TVLVQNKIDLLEETVIKSEEAEALAKRLKLRFYRASVKEDLNVNEVFKCLADKYLQRLRQ 175
Query: 192 QEEEYSI 198
Q E +
Sbjct: 176 QAAETEV 182
Score = 96.3 bits (238), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 43/52 (82%), Positives = 47/52 (90%)
Query: 9 EEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 60
EEVRLMLWDTAGQEEFDAITKAYYRGAQACV+ FST DR+SF+A SW+ KV
Sbjct: 56 EEVRLMLWDTAGQEEFDAITKAYYRGAQACVLVFSTTDRESFQAIDSWREKV 107
>gi|301767102|ref|XP_002918967.1| PREDICTED: ras-related protein Rab-23-like [Ailuropoda melanoleuca]
gi|281341027|gb|EFB16611.1| hypothetical protein PANDA_007522 [Ailuropoda melanoleuca]
Length = 237
Score = 174 bits (442), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 83/121 (68%), Positives = 97/121 (80%)
Query: 72 EEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGEIP 131
E+VRLMLWDTAGQEEFDAITKAYYRGAQACV+ FST DR+SFEA SW+ KV E G+IP
Sbjct: 56 EDVRLMLWDTAGQEEFDAITKAYYRGAQACVLVFSTTDRESFEAVSSWREKVVAEVGDIP 115
Query: 132 TVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSELRQ 191
TVLVQNKIDLLD S + EEA+ L++ L R RTSVKED+NV +F+YL K L +L+Q
Sbjct: 116 TVLVQNKIDLLDDSCIKNEEAEALAKKLKLRFYRTSVKEDLNVTEVFKYLAEKYLQKLKQ 175
Query: 192 Q 192
Q
Sbjct: 176 Q 176
Score = 97.1 bits (240), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 43/52 (82%), Positives = 47/52 (90%)
Query: 9 EEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 60
E+VRLMLWDTAGQEEFDAITKAYYRGAQACV+ FST DR+SFEA SW+ KV
Sbjct: 56 EDVRLMLWDTAGQEEFDAITKAYYRGAQACVLVFSTTDRESFEAVSSWREKV 107
>gi|395534394|ref|XP_003769227.1| PREDICTED: ras-related protein Rab-23 [Sarcophilus harrisii]
Length = 237
Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 83/121 (68%), Positives = 97/121 (80%)
Query: 72 EEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGEIP 131
E+VRLMLWDTAGQEEFDAITKAYYRGAQACV+ FSTIDR+SFEA SW+ KV E G+IP
Sbjct: 56 EDVRLMLWDTAGQEEFDAITKAYYRGAQACVLVFSTIDRESFEAISSWREKVVTEVGDIP 115
Query: 132 TVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSELRQ 191
TVLVQNKIDLLD S + EEA+ L++ L R R SVKED+NV +F+YL K L +L+Q
Sbjct: 116 TVLVQNKIDLLDDSCIKNEEAEALAKKLKLRFYRASVKEDLNVTEVFKYLAEKYLQKLKQ 175
Query: 192 Q 192
Q
Sbjct: 176 Q 176
Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 44/52 (84%), Positives = 48/52 (92%)
Query: 9 EEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 60
E+VRLMLWDTAGQEEFDAITKAYYRGAQACV+ FSTIDR+SFEA SW+ KV
Sbjct: 56 EDVRLMLWDTAGQEEFDAITKAYYRGAQACVLVFSTIDRESFEAISSWREKV 107
>gi|194223637|ref|XP_001499806.2| PREDICTED: ras-related protein Rab-23-like [Equus caballus]
Length = 237
Score = 174 bits (440), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 83/121 (68%), Positives = 98/121 (80%)
Query: 72 EEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGEIP 131
E+VRLMLWDTAGQEEFDAITKAYYRGAQACV+ FST DR+SFEA SW+ KV E G+IP
Sbjct: 56 EDVRLMLWDTAGQEEFDAITKAYYRGAQACVLVFSTTDRESFEAISSWREKVVAEVGDIP 115
Query: 132 TVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSELRQ 191
TVLVQNKIDLLD S + EEA+ L++ L R RTSVKED+NV+ +F+YL K L +L+Q
Sbjct: 116 TVLVQNKIDLLDDSCIKNEEAEALAKKLKLRFYRTSVKEDLNVSEVFKYLAEKYLQKLKQ 175
Query: 192 Q 192
Q
Sbjct: 176 Q 176
Score = 96.3 bits (238), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 43/52 (82%), Positives = 47/52 (90%)
Query: 9 EEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 60
E+VRLMLWDTAGQEEFDAITKAYYRGAQACV+ FST DR+SFEA SW+ KV
Sbjct: 56 EDVRLMLWDTAGQEEFDAITKAYYRGAQACVLVFSTTDRESFEAISSWREKV 107
>gi|73973432|ref|XP_538975.2| PREDICTED: ras-related protein Rab-23 [Canis lupus familiaris]
Length = 237
Score = 174 bits (440), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 83/121 (68%), Positives = 97/121 (80%)
Query: 72 EEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGEIP 131
E+VRLMLWDTAGQEEFDAITKAYYRGAQACV+ FST DR+SFEA SW+ KV E G+IP
Sbjct: 56 EDVRLMLWDTAGQEEFDAITKAYYRGAQACVLVFSTTDRESFEAISSWREKVVAEVGDIP 115
Query: 132 TVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSELRQ 191
TVLVQNKIDLLD S + EEA+ L++ L R RTSVKED+NV +F+YL K L +L+Q
Sbjct: 116 TVLVQNKIDLLDDSCIKNEEAEALAKKLKLRFYRTSVKEDLNVTEVFKYLAEKYLQKLKQ 175
Query: 192 Q 192
Q
Sbjct: 176 Q 176
Score = 96.3 bits (238), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 43/52 (82%), Positives = 47/52 (90%)
Query: 9 EEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 60
E+VRLMLWDTAGQEEFDAITKAYYRGAQACV+ FST DR+SFEA SW+ KV
Sbjct: 56 EDVRLMLWDTAGQEEFDAITKAYYRGAQACVLVFSTTDRESFEAISSWREKV 107
>gi|157823749|ref|NP_001102475.1| ras-related protein Rab-23 [Rattus norvegicus]
gi|149046425|gb|EDL99318.1| RAB23, member RAS oncogene family (predicted) [Rattus norvegicus]
Length = 237
Score = 174 bits (440), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 83/121 (68%), Positives = 97/121 (80%)
Query: 72 EEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGEIP 131
E+VRLMLWDTAGQEEFDAITKAYYRGAQACV+ FST DR+SFEA SW+ KV E G+IP
Sbjct: 56 EDVRLMLWDTAGQEEFDAITKAYYRGAQACVLVFSTTDRESFEAISSWREKVVAEVGDIP 115
Query: 132 TVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSELRQ 191
T LVQNKIDLLD S + EEA+ L++ L R RTSVKED+NVN +F+YL K L +L+Q
Sbjct: 116 TALVQNKIDLLDDSCIKNEEAEGLAKRLKLRFYRTSVKEDLNVNEVFKYLAEKHLQKLKQ 175
Query: 192 Q 192
Q
Sbjct: 176 Q 176
Score = 96.7 bits (239), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 43/52 (82%), Positives = 47/52 (90%)
Query: 9 EEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 60
E+VRLMLWDTAGQEEFDAITKAYYRGAQACV+ FST DR+SFEA SW+ KV
Sbjct: 56 EDVRLMLWDTAGQEEFDAITKAYYRGAQACVLVFSTTDRESFEAISSWREKV 107
>gi|126310181|ref|XP_001364838.1| PREDICTED: ras-related protein Rab-23-like [Monodelphis domestica]
Length = 237
Score = 174 bits (440), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 83/121 (68%), Positives = 97/121 (80%)
Query: 72 EEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGEIP 131
E+VRLMLWDTAGQEEFDAITKAYYRGAQACV+ FSTIDR+SFEA SW+ KV E G+IP
Sbjct: 56 EDVRLMLWDTAGQEEFDAITKAYYRGAQACVLVFSTIDRESFEAISSWREKVVTEVGDIP 115
Query: 132 TVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSELRQ 191
TVLVQNKIDLLD S + EEA+ L++ L R R SVKED+NV +F+YL K L +L+Q
Sbjct: 116 TVLVQNKIDLLDDSCIKNEEAEALAKRLKLRFYRASVKEDLNVTEVFKYLAEKYLQKLKQ 175
Query: 192 Q 192
Q
Sbjct: 176 Q 176
Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 44/52 (84%), Positives = 48/52 (92%)
Query: 9 EEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 60
E+VRLMLWDTAGQEEFDAITKAYYRGAQACV+ FSTIDR+SFEA SW+ KV
Sbjct: 56 EDVRLMLWDTAGQEEFDAITKAYYRGAQACVLVFSTIDRESFEAISSWREKV 107
>gi|158519801|ref|NP_001103530.1| ras-related protein Rab-23 [Gallus gallus]
gi|158252062|gb|ABW24032.1| Rab23 GTPase [Gallus gallus]
Length = 237
Score = 172 bits (437), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 83/128 (64%), Positives = 97/128 (75%)
Query: 68 ECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENEC 127
+ EEVRLMLWDTAGQEEFDAITKAYYRGAQACV+ FST DR+SF+A +WK KV E
Sbjct: 52 QVNDEEVRLMLWDTAGQEEFDAITKAYYRGAQACVLVFSTTDRESFKAIPTWKEKVTTEV 111
Query: 128 GEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLS 187
G+IPTVLVQNKIDLLD S + EEA+ L++ L R R SVKED+NV +F+YL K L
Sbjct: 112 GDIPTVLVQNKIDLLDDSCIKNEEAEALAKKLKLRFYRASVKEDLNVTEVFKYLADKYLQ 171
Query: 188 ELRQQEEE 195
L+QQ E
Sbjct: 172 RLKQQTAE 179
Score = 96.7 bits (239), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 43/53 (81%), Positives = 48/53 (90%)
Query: 9 EEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVS 61
EEVRLMLWDTAGQEEFDAITKAYYRGAQACV+ FST DR+SF+A +WK KV+
Sbjct: 56 EEVRLMLWDTAGQEEFDAITKAYYRGAQACVLVFSTTDRESFKAIPTWKEKVT 108
>gi|387017932|gb|AFJ51084.1| ras-related protein Rab-23-like [Crotalus adamanteus]
Length = 237
Score = 172 bits (437), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 81/125 (64%), Positives = 99/125 (79%)
Query: 68 ECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENEC 127
+ E+VRLMLWDTAGQEEFDAITKAYYRGAQACV+ FST+DR+SFEA +W+ KV +E
Sbjct: 52 QVNDEDVRLMLWDTAGQEEFDAITKAYYRGAQACVLVFSTVDRESFEAIPTWRQKVISEV 111
Query: 128 GEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLS 187
G+IPTVLVQNKIDLLD S + EEA+ L++ L R R SVKED+NV +FRYL K L
Sbjct: 112 GDIPTVLVQNKIDLLDDSCIKNEEAEALAKKLKLRFYRASVKEDLNVTEVFRYLAEKYLQ 171
Query: 188 ELRQQ 192
+L+Q+
Sbjct: 172 KLKQR 176
Score = 97.4 bits (241), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 42/52 (80%), Positives = 48/52 (92%)
Query: 9 EEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 60
E+VRLMLWDTAGQEEFDAITKAYYRGAQACV+ FST+DR+SFEA +W+ KV
Sbjct: 56 EDVRLMLWDTAGQEEFDAITKAYYRGAQACVLVFSTVDRESFEAIPTWRQKV 107
>gi|332634768|ref|NP_001193835.1| ras-related protein Rab-23 [Bos taurus]
gi|426250098|ref|XP_004018775.1| PREDICTED: ras-related protein Rab-23 [Ovis aries]
gi|296474595|tpg|DAA16710.1| TPA: Rab23-like [Bos taurus]
gi|440902781|gb|ELR53528.1| Ras-related protein Rab-23 [Bos grunniens mutus]
Length = 237
Score = 172 bits (436), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 82/121 (67%), Positives = 97/121 (80%)
Query: 72 EEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGEIP 131
E+VRLMLWDTAGQEEFDAITKAYYRGAQACV+ FST DR+SFEA SW+ KV E G+IP
Sbjct: 56 EDVRLMLWDTAGQEEFDAITKAYYRGAQACVLVFSTTDRESFEAISSWREKVVAEVGDIP 115
Query: 132 TVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSELRQ 191
T LVQNKIDLLD S + EEA+ L++ L R RTSVKED+NV+ +F+YL K L +L+Q
Sbjct: 116 TALVQNKIDLLDDSCIKNEEAEALAKKLKLRFYRTSVKEDLNVSEVFKYLAEKYLQKLKQ 175
Query: 192 Q 192
Q
Sbjct: 176 Q 176
Score = 96.3 bits (238), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 43/52 (82%), Positives = 47/52 (90%)
Query: 9 EEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 60
E+VRLMLWDTAGQEEFDAITKAYYRGAQACV+ FST DR+SFEA SW+ KV
Sbjct: 56 EDVRLMLWDTAGQEEFDAITKAYYRGAQACVLVFSTTDRESFEAISSWREKV 107
>gi|62858815|ref|NP_001016964.1| RAB23, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|68534683|gb|AAH98510.1| RAB23, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|89271879|emb|CAJ82246.1| RAB23, member RAS oncogene family [Xenopus (Silurana) tropicalis]
Length = 238
Score = 172 bits (436), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 82/124 (66%), Positives = 98/124 (79%)
Query: 72 EEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGEIP 131
E+VRLMLWDTAGQEEFDAITKAYYRGAQACV+ FST DR+SFE SW+ KV E G+IP
Sbjct: 56 EDVRLMLWDTAGQEEFDAITKAYYRGAQACVLVFSTTDRESFETIPSWREKVVAEVGDIP 115
Query: 132 TVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSELRQ 191
TVLVQNKIDLLD++V+ EEA+ L++ L R RTSVKED+NV +F+YL K L L++
Sbjct: 116 TVLVQNKIDLLDETVIKNEEAEALAKRLKLRFYRTSVKEDLNVTEVFKYLADKYLQRLKR 175
Query: 192 QEEE 195
Q E
Sbjct: 176 QTAE 179
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 42/52 (80%), Positives = 46/52 (88%)
Query: 9 EEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 60
E+VRLMLWDTAGQEEFDAITKAYYRGAQACV+ FST DR+SFE SW+ KV
Sbjct: 56 EDVRLMLWDTAGQEEFDAITKAYYRGAQACVLVFSTTDRESFETIPSWREKV 107
>gi|449283615|gb|EMC90220.1| Ras-related protein Rab-23 [Columba livia]
Length = 237
Score = 172 bits (436), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 82/128 (64%), Positives = 98/128 (76%)
Query: 68 ECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENEC 127
+ E+VRLMLWDTAGQEEFDAITKAYYRGAQACV+ FST DR+SF+A +WK KV E
Sbjct: 52 QVNDEDVRLMLWDTAGQEEFDAITKAYYRGAQACVLVFSTTDRESFKAIPTWKEKVMTEV 111
Query: 128 GEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLS 187
G+IPTVLVQNKIDLLD S + EEA+ L++ L R R SVKED+NV +F+YL K L
Sbjct: 112 GDIPTVLVQNKIDLLDDSCIKNEEAEALAKKLKLRFYRASVKEDLNVTEVFKYLADKYLQ 171
Query: 188 ELRQQEEE 195
+L+QQ E
Sbjct: 172 KLKQQTSE 179
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 42/52 (80%), Positives = 47/52 (90%)
Query: 9 EEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 60
E+VRLMLWDTAGQEEFDAITKAYYRGAQACV+ FST DR+SF+A +WK KV
Sbjct: 56 EDVRLMLWDTAGQEEFDAITKAYYRGAQACVLVFSTTDRESFKAIPTWKEKV 107
>gi|327261405|ref|XP_003215521.1| PREDICTED: ras-related protein Rab-23-like [Anolis carolinensis]
Length = 238
Score = 172 bits (435), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 82/121 (67%), Positives = 98/121 (80%)
Query: 72 EEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGEIP 131
E+VRLMLWDTAGQEEFDAITKAYYRGAQACV+ FST DR+SFEA +W+ KV E G+IP
Sbjct: 56 EDVRLMLWDTAGQEEFDAITKAYYRGAQACVLVFSTTDRESFEAIPTWREKVVAEVGDIP 115
Query: 132 TVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSELRQ 191
TVLVQNKIDLLD S + EEA+ L++ L R RTSVKED+NV +FRYL+ K L +L+Q
Sbjct: 116 TVLVQNKIDLLDYSCIKNEEAEALAKKLKLRFYRTSVKEDLNVTEVFRYLSEKYLQKLKQ 175
Query: 192 Q 192
+
Sbjct: 176 R 176
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 42/52 (80%), Positives = 47/52 (90%)
Query: 9 EEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 60
E+VRLMLWDTAGQEEFDAITKAYYRGAQACV+ FST DR+SFEA +W+ KV
Sbjct: 56 EDVRLMLWDTAGQEEFDAITKAYYRGAQACVLVFSTTDRESFEAIPTWREKV 107
>gi|72017227|ref|XP_791019.1| PREDICTED: ras-related protein Rab-23-like isoform 2
[Strongylocentrotus purpuratus]
gi|390359535|ref|XP_003729499.1| PREDICTED: ras-related protein Rab-23-like isoform 1
[Strongylocentrotus purpuratus]
Length = 233
Score = 171 bits (434), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 79/128 (61%), Positives = 100/128 (78%)
Query: 68 ECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENEC 127
E E+VRLMLWDTAGQEEFDAITK+YYRGAQA V+ FST+DRDSFEA W++KVE+E
Sbjct: 52 EFNDEDVRLMLWDTAGQEEFDAITKSYYRGAQAGVLVFSTVDRDSFEAIDKWRVKVEDEV 111
Query: 128 GEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLS 187
G IP VLVQNKIDL++Q+V+ PEEA+ L++ + R RTSVKE++NV +FRYLT + +
Sbjct: 112 GNIPLVLVQNKIDLVEQAVLEPEEAEALAKRMKLRFYRTSVKENLNVEDVFRYLTERYIE 171
Query: 188 ELRQQEEE 195
+ E E
Sbjct: 172 RIHSTEPE 179
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 41/52 (78%), Positives = 47/52 (90%)
Query: 9 EEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 60
E+VRLMLWDTAGQEEFDAITK+YYRGAQA V+ FST+DRDSFEA W++KV
Sbjct: 56 EDVRLMLWDTAGQEEFDAITKSYYRGAQAGVLVFSTVDRDSFEAIDKWRVKV 107
>gi|31543565|ref|NP_033025.2| ras-related protein Rab-23 [Mus musculus]
gi|228480287|ref|NP_001153201.1| ras-related protein Rab-23 [Mus musculus]
gi|12855257|dbj|BAB30270.1| unnamed protein product [Mus musculus]
gi|26338556|dbj|BAC32949.1| unnamed protein product [Mus musculus]
gi|148682489|gb|EDL14436.1| RAB23, member RAS oncogene family, isoform CRA_a [Mus musculus]
Length = 237
Score = 171 bits (434), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 82/121 (67%), Positives = 97/121 (80%)
Query: 72 EEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGEIP 131
E+VRLMLWDTAGQEEFDAITKAYYRGAQACV+ FST DR+SFEA SW+ KV E G+IP
Sbjct: 56 EDVRLMLWDTAGQEEFDAITKAYYRGAQACVLVFSTTDRESFEAISSWREKVVAEVGDIP 115
Query: 132 TVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSELRQ 191
T LVQNKIDLLD S + EEA+ L++ L R RTSVKED+NV+ +F+YL K L +L+Q
Sbjct: 116 TALVQNKIDLLDDSCIKNEEAEGLAKRLKLRFYRTSVKEDLNVSEVFKYLAEKHLQKLKQ 175
Query: 192 Q 192
Q
Sbjct: 176 Q 176
Score = 96.7 bits (239), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 43/52 (82%), Positives = 47/52 (90%)
Query: 9 EEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 60
E+VRLMLWDTAGQEEFDAITKAYYRGAQACV+ FST DR+SFEA SW+ KV
Sbjct: 56 EDVRLMLWDTAGQEEFDAITKAYYRGAQACVLVFSTTDRESFEAISSWREKV 107
>gi|1710020|sp|P35288.2|RAB23_MOUSE RecName: Full=Ras-related protein Rab-23; AltName: Full=Rab-15;
Flags: Precursor
gi|438162|emb|CAA80474.1| Rab23 protein [Mus musculus]
gi|19344040|gb|AAH25578.1| RAB23, member RAS oncogene family [Mus musculus]
gi|112293005|dbj|BAF02880.1| Rab23 [Mus musculus]
gi|741024|prf||2006284A GTPase Rab23
Length = 237
Score = 171 bits (434), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 82/121 (67%), Positives = 97/121 (80%)
Query: 72 EEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGEIP 131
E+VRLMLWDTAGQEEFDAITKAYYRGAQACV+ FST DR+SFEA SW+ KV E G+IP
Sbjct: 56 EDVRLMLWDTAGQEEFDAITKAYYRGAQACVLVFSTTDRESFEAISSWREKVVAEVGDIP 115
Query: 132 TVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSELRQ 191
T LVQNKIDLLD S + EEA+ L++ L R RTSVKED+NV+ +F+YL K L +L+Q
Sbjct: 116 TALVQNKIDLLDDSCIKNEEAEGLAKRLKLRFYRTSVKEDLNVSEVFKYLAEKHLQKLKQ 175
Query: 192 Q 192
Q
Sbjct: 176 Q 176
Score = 96.7 bits (239), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 43/52 (82%), Positives = 47/52 (90%)
Query: 9 EEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 60
E+VRLMLWDTAGQEEFDAITKAYYRGAQACV+ FST DR+SFEA SW+ KV
Sbjct: 56 EDVRLMLWDTAGQEEFDAITKAYYRGAQACVLVFSTTDRESFEAISSWREKV 107
>gi|148682490|gb|EDL14437.1| RAB23, member RAS oncogene family, isoform CRA_b [Mus musculus]
Length = 264
Score = 171 bits (433), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 82/121 (67%), Positives = 97/121 (80%)
Query: 72 EEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGEIP 131
E+VRLMLWDTAGQEEFDAITKAYYRGAQACV+ FST DR+SFEA SW+ KV E G+IP
Sbjct: 83 EDVRLMLWDTAGQEEFDAITKAYYRGAQACVLVFSTTDRESFEAISSWREKVVAEVGDIP 142
Query: 132 TVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSELRQ 191
T LVQNKIDLLD S + EEA+ L++ L R RTSVKED+NV+ +F+YL K L +L+Q
Sbjct: 143 TALVQNKIDLLDDSCIKNEEAEGLAKRLKLRFYRTSVKEDLNVSEVFKYLAEKHLQKLKQ 202
Query: 192 Q 192
Q
Sbjct: 203 Q 203
Score = 96.3 bits (238), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 43/52 (82%), Positives = 47/52 (90%)
Query: 9 EEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 60
E+VRLMLWDTAGQEEFDAITKAYYRGAQACV+ FST DR+SFEA SW+ KV
Sbjct: 83 EDVRLMLWDTAGQEEFDAITKAYYRGAQACVLVFSTTDRESFEAISSWREKV 134
>gi|326916365|ref|XP_003204478.1| PREDICTED: ras-related protein Rab-23-like [Meleagris gallopavo]
Length = 237
Score = 171 bits (433), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 82/128 (64%), Positives = 97/128 (75%)
Query: 68 ECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENEC 127
+ E+VRLMLWDTAGQEEFDAITKAYYRGAQACV+ FST DR+SF+A +WK KV E
Sbjct: 52 QVNDEDVRLMLWDTAGQEEFDAITKAYYRGAQACVLVFSTTDRESFKAIPTWKEKVMTEV 111
Query: 128 GEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLS 187
G+IPTVLVQNKIDLLD S + EEA+ L++ L R R SVKED+NV +F+YL K L
Sbjct: 112 GDIPTVLVQNKIDLLDDSCIKNEEAEALAKKLKLRFYRASVKEDLNVTEVFKYLADKYLQ 171
Query: 188 ELRQQEEE 195
L+QQ E
Sbjct: 172 RLKQQTAE 179
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 42/52 (80%), Positives = 47/52 (90%)
Query: 9 EEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 60
E+VRLMLWDTAGQEEFDAITKAYYRGAQACV+ FST DR+SF+A +WK KV
Sbjct: 56 EDVRLMLWDTAGQEEFDAITKAYYRGAQACVLVFSTTDRESFKAIPTWKEKV 107
>gi|149639357|ref|XP_001505274.1| PREDICTED: ras-related protein Rab-23-like [Ornithorhynchus
anatinus]
Length = 237
Score = 171 bits (432), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 82/124 (66%), Positives = 96/124 (77%)
Query: 72 EEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGEIP 131
E+VRLMLWDTAGQEEFDAITKAYYRGAQACV+ FST DR+SFEA SW+ KV E G+IP
Sbjct: 56 EDVRLMLWDTAGQEEFDAITKAYYRGAQACVLVFSTTDRESFEAVPSWREKVVTEVGDIP 115
Query: 132 TVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSELRQ 191
+VLVQNKIDLLD S + EEA+ L++ L R R SVKED+NV +F+YL K L L+Q
Sbjct: 116 SVLVQNKIDLLDDSCIKNEEAEALAKRLKLRFYRASVKEDLNVTEVFKYLAEKYLQRLKQ 175
Query: 192 QEEE 195
Q E
Sbjct: 176 QTAE 179
Score = 96.3 bits (238), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 43/52 (82%), Positives = 47/52 (90%)
Query: 9 EEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 60
E+VRLMLWDTAGQEEFDAITKAYYRGAQACV+ FST DR+SFEA SW+ KV
Sbjct: 56 EDVRLMLWDTAGQEEFDAITKAYYRGAQACVLVFSTTDRESFEAVPSWREKV 107
>gi|148224010|ref|NP_001086377.1| RAB23, member RAS oncogene family [Xenopus laevis]
gi|49522135|gb|AAH75188.1| MGC82152 protein [Xenopus laevis]
Length = 238
Score = 170 bits (430), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 81/124 (65%), Positives = 98/124 (79%)
Query: 72 EEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGEIP 131
E+VRLMLWDTAGQEEFDAITKAYYRGAQACV+ FST DR+S E+ SW+ KV E G+IP
Sbjct: 56 EDVRLMLWDTAGQEEFDAITKAYYRGAQACVLVFSTTDRESLESIPSWREKVVAEVGDIP 115
Query: 132 TVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSELRQ 191
TVLVQNKIDLLD +V+ EEA+ L++ L R RTSVKED+NV +F+YL+ K L L++
Sbjct: 116 TVLVQNKIDLLDDTVIKNEEAEALAKRLKLRFYRTSVKEDLNVTEVFKYLSDKYLQRLKR 175
Query: 192 QEEE 195
Q E
Sbjct: 176 QTAE 179
Score = 92.8 bits (229), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 41/52 (78%), Positives = 46/52 (88%)
Query: 9 EEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 60
E+VRLMLWDTAGQEEFDAITKAYYRGAQACV+ FST DR+S E+ SW+ KV
Sbjct: 56 EDVRLMLWDTAGQEEFDAITKAYYRGAQACVLVFSTTDRESLESIPSWREKV 107
>gi|198415754|ref|XP_002121180.1| PREDICTED: similar to RAB23, member RAS oncogene family [Ciona
intestinalis]
Length = 243
Score = 168 bits (425), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 81/127 (63%), Positives = 100/127 (78%), Gaps = 1/127 (0%)
Query: 72 EEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENECG-EI 130
++VRLMLWDTAGQEEFDA+TKAYYRGAQACV+ FST DR+SFEA +WK KVE E G I
Sbjct: 56 DDVRLMLWDTAGQEEFDALTKAYYRGAQACVLAFSTTDRNSFEAVENWKSKVEEEVGPNI 115
Query: 131 PTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSELR 190
P LVQNKIDLLD +VV EA+ L++ L R RTSVKED+NV+ +F+YL TK + ++R
Sbjct: 116 PIALVQNKIDLLDDAVVEQHEAEGLAKRLKLRFYRTSVKEDLNVDEVFKYLATKHIQKMR 175
Query: 191 QQEEEYS 197
Q+ E+ S
Sbjct: 176 QEGEKES 182
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 41/52 (78%), Positives = 47/52 (90%)
Query: 9 EEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 60
++VRLMLWDTAGQEEFDA+TKAYYRGAQACV+ FST DR+SFEA +WK KV
Sbjct: 56 DDVRLMLWDTAGQEEFDALTKAYYRGAQACVLAFSTTDRNSFEAVENWKSKV 107
>gi|196008533|ref|XP_002114132.1| hypothetical protein TRIADDRAFT_58283 [Trichoplax adhaerens]
gi|190583151|gb|EDV23222.1| hypothetical protein TRIADDRAFT_58283 [Trichoplax adhaerens]
Length = 236
Score = 165 bits (417), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 79/139 (56%), Positives = 100/139 (71%), Gaps = 1/139 (0%)
Query: 70 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGE 129
+ +++RLMLWDTAGQEEFDAITK+YYRGAQACV+ FST DRDSFEA SWK KVE E G
Sbjct: 54 DSKDIRLMLWDTAGQEEFDAITKSYYRGAQACVLAFSTTDRDSFEAIESWKRKVEAEVGS 113
Query: 130 IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSEL 189
IP VLVQNKIDL+D + + EE + L++ L R RTSVK+++ V+ +F+YL TK L +
Sbjct: 114 IPMVLVQNKIDLIDDAKMDSEETEKLAKKLHLRFYRTSVKDNVKVDDVFKYLATKYLKLI 173
Query: 190 RQQEEEYSIN-GNGLPPYT 207
+ EE GN L +
Sbjct: 174 EKSGEEVGQQIGNNLDMFN 192
Score = 97.4 bits (241), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 42/54 (77%), Positives = 48/54 (88%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 60
+ +++RLMLWDTAGQEEFDAITK+YYRGAQACV+ FST DRDSFEA SWK KV
Sbjct: 54 DSKDIRLMLWDTAGQEEFDAITKSYYRGAQACVLAFSTTDRDSFEAIESWKRKV 107
>gi|355561818|gb|EHH18450.1| hypothetical protein EGK_15045 [Macaca mulatta]
Length = 237
Score = 164 bits (416), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 81/121 (66%), Positives = 93/121 (76%)
Query: 72 EEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGEIP 131
E+VRLMLWDTAGQEEFDAITKAYYRGAQACV+ FST DR+SFEA SW+ KV E G+IP
Sbjct: 56 EDVRLMLWDTAGQEEFDAITKAYYRGAQACVLVFSTTDRESFEAVSSWREKVVAEVGDIP 115
Query: 132 TVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSELRQ 191
TVLVQNKIDLLD S + EEA+ L++ L R RTSVKED+NVN K L +L+Q
Sbjct: 116 TVLVQNKIDLLDDSCIKNEEAEALAKRLKLRFYRTSVKEDLNVNEXXXXXXEKYLQKLKQ 175
Query: 192 Q 192
Q
Sbjct: 176 Q 176
Score = 97.1 bits (240), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 43/52 (82%), Positives = 47/52 (90%)
Query: 9 EEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 60
E+VRLMLWDTAGQEEFDAITKAYYRGAQACV+ FST DR+SFEA SW+ KV
Sbjct: 56 EDVRLMLWDTAGQEEFDAITKAYYRGAQACVLVFSTTDRESFEAVSSWREKV 107
>gi|73535794|pdb|1Z22|A Chain A, Gdp-Bound Rab23 Gtpase Crystallized In C222(1) Space Group
gi|73535795|pdb|1Z2A|A Chain A, Gdp-Bound Rab23 Gtpase Crystallized In P2(1)2(1)2(1) Space
Group
Length = 168
Score = 164 bits (415), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 79/117 (67%), Positives = 93/117 (79%)
Query: 72 EEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGEIP 131
E+VRLMLWDTAGQEEFDAITKAYYRGAQACV+ FST DR+SFEA SW+ KV E G+IP
Sbjct: 52 EDVRLMLWDTAGQEEFDAITKAYYRGAQACVLVFSTTDRESFEAISSWREKVVAEVGDIP 111
Query: 132 TVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSE 188
T LVQNKIDLLD S + EEA+ L++ L R RTSVKED+NV+ +F+YL K L +
Sbjct: 112 TALVQNKIDLLDDSCIKNEEAEGLAKRLKLRFYRTSVKEDLNVSEVFKYLAEKHLQK 168
Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 43/52 (82%), Positives = 47/52 (90%)
Query: 9 EEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 60
E+VRLMLWDTAGQEEFDAITKAYYRGAQACV+ FST DR+SFEA SW+ KV
Sbjct: 52 EDVRLMLWDTAGQEEFDAITKAYYRGAQACVLVFSTTDRESFEAISSWREKV 103
>gi|225713956|gb|ACO12824.1| Ras-related protein Rab-23 [Lepeophtheirus salmonis]
Length = 269
Score = 162 bits (410), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 76/114 (66%), Positives = 90/114 (78%)
Query: 71 GEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGEI 130
GE+VRLMLWDTAGQEEFDAIT+AYYRGAQACVI FSTIDR SF A WK KVE+ECG I
Sbjct: 64 GEDVRLMLWDTAGQEEFDAITRAYYRGAQACVIVFSTIDRPSFAAVKKWKRKVEDECGHI 123
Query: 131 PTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLTTK 184
P VLVQNKIDLL ++ V E + +R +G +L RTSVKE++NVN +F+ L +
Sbjct: 124 PMVLVQNKIDLLHETQVDNTEIEKFARNMGLKLFRTSVKENLNVNKVFQLLAER 177
Score = 97.1 bits (240), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 44/53 (83%), Positives = 46/53 (86%)
Query: 8 GEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 60
GE+VRLMLWDTAGQEEFDAIT+AYYRGAQACVI FSTIDR SF A WK KV
Sbjct: 64 GEDVRLMLWDTAGQEEFDAITRAYYRGAQACVIVFSTIDRPSFAAVKKWKRKV 116
>gi|405971384|gb|EKC36223.1| Ras-related protein Rab-23 [Crassostrea gigas]
Length = 224
Score = 160 bits (406), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 77/108 (71%), Positives = 89/108 (82%)
Query: 68 ECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENEC 127
E GEEVRLMLWDTAGQEEFDAITKAYYRGAQACV+ FST+DRDSFEA SWK KVE+E
Sbjct: 52 EVNGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVLAFSTVDRDSFEAIESWKKKVEDEV 111
Query: 128 GEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVN 175
GEI V+VQNKIDL+D +VV EEA+ L+ L R RTSVK+++NV+
Sbjct: 112 GEIGMVIVQNKIDLIDDAVVETEEAEALAHRLRLRFYRTSVKDNLNVD 159
Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 47/53 (88%), Positives = 49/53 (92%)
Query: 8 GEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 60
GEEVRLMLWDTAGQEEFDAITKAYYRGAQACV+ FST+DRDSFEA SWK KV
Sbjct: 55 GEEVRLMLWDTAGQEEFDAITKAYYRGAQACVLAFSTVDRDSFEAIESWKKKV 107
>gi|340383365|ref|XP_003390188.1| PREDICTED: ras-related protein Rab-23-like [Amphimedon
queenslandica]
Length = 242
Score = 160 bits (406), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 75/132 (56%), Positives = 99/132 (75%)
Query: 68 ECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENEC 127
E + + VRLM+WDTAGQEEFD+ITKAYYRGAQ CV+ FST D+DSF+A WK KVE EC
Sbjct: 52 EVDDDNVRLMVWDTAGQEEFDSITKAYYRGAQVCVLAFSTTDKDSFDAIERWKNKVEAEC 111
Query: 128 GEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLS 187
G I V+VQNKIDL+D+S V+ E+ + L++ L L RTSVKE+ N++ +F YL+ K LS
Sbjct: 112 GAIVMVVVQNKIDLIDESAVSAEDVEALTKRLKLHLFRTSVKENFNIDEVFLYLSRKFLS 171
Query: 188 ELRQQEEEYSIN 199
+ R++ E + N
Sbjct: 172 QQRKEATERAQN 183
>gi|443686937|gb|ELT90055.1| hypothetical protein CAPTEDRAFT_178029 [Capitella teleta]
Length = 240
Score = 159 bits (403), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 77/128 (60%), Positives = 97/128 (75%)
Query: 68 ECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENEC 127
E E+VRLMLWDTAGQEEFDAIT+AYYRGAQACVI FS +DRDSFEA WK KVE+E
Sbjct: 56 EVNCEDVRLMLWDTAGQEEFDAITRAYYRGAQACVIAFSIVDRDSFEAIQDWKRKVEDEV 115
Query: 128 GEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLS 187
G+IPTV VQNK+DL D+++VA +E D L +L +TSVK ++ V+ +F+YL K L
Sbjct: 116 GQIPTVFVQNKMDLADETLVAQKEVDDLVANSRLKLFKTSVKNNVCVDDVFKYLAEKYLE 175
Query: 188 ELRQQEEE 195
+L ++ EE
Sbjct: 176 QLDERFEE 183
>gi|444724982|gb|ELW65566.1| Ras-related protein Rab-23 [Tupaia chinensis]
Length = 206
Score = 158 bits (399), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 76/104 (73%), Positives = 87/104 (83%)
Query: 72 EEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGEIP 131
E+VRLMLWDTAGQEEFDAITKAYYRGAQACV+ FST DR+SFEA SW+ KV E G+IP
Sbjct: 56 EDVRLMLWDTAGQEEFDAITKAYYRGAQACVLVFSTTDRESFEAISSWREKVVAEVGDIP 115
Query: 132 TVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVN 175
TVLVQNKIDLLD+S + EEA+ L++ L R RTSVKED+NVN
Sbjct: 116 TVLVQNKIDLLDESCIKNEEAEALAKRLKLRFYRTSVKEDLNVN 159
Score = 96.3 bits (238), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 43/52 (82%), Positives = 47/52 (90%)
Query: 9 EEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 60
E+VRLMLWDTAGQEEFDAITKAYYRGAQACV+ FST DR+SFEA SW+ KV
Sbjct: 56 EDVRLMLWDTAGQEEFDAITKAYYRGAQACVLVFSTTDRESFEAISSWREKV 107
>gi|326431353|gb|EGD76923.1| Ras family domain-containing protein [Salpingoeca sp. ATCC 50818]
Length = 228
Score = 157 bits (397), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 70/126 (55%), Positives = 99/126 (78%)
Query: 69 CEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENECG 128
+GEE+RLM+WDTAGQEEFD++TKAYYR A+ACV+ FSTIDRDSFEA SW KVE+E G
Sbjct: 53 VKGEELRLMIWDTAGQEEFDSLTKAYYRDAEACVVAFSTIDRDSFEAVESWIKKVEDEVG 112
Query: 129 EIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSE 188
IP VL+QNK+DL++++ + EEA+ L+ + + RTSV+E+ NV+ +F+YL+ + E
Sbjct: 113 RIPMVLIQNKVDLIEEAAMTKEEAEALADRIKLKFYRTSVQENYNVDQVFQYLSELYVDE 172
Query: 189 LRQQEE 194
L++ E+
Sbjct: 173 LKKSEQ 178
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 41/55 (74%), Positives = 48/55 (87%)
Query: 6 CEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 60
+GEE+RLM+WDTAGQEEFD++TKAYYR A+ACV+ FSTIDRDSFEA SW KV
Sbjct: 53 VKGEELRLMIWDTAGQEEFDSLTKAYYRDAEACVVAFSTIDRDSFEAVESWIKKV 107
>gi|159476948|ref|XP_001696573.1| small rab-related GTPase [Chlamydomonas reinhardtii]
gi|158282798|gb|EDP08550.1| small rab-related GTPase [Chlamydomonas reinhardtii]
Length = 256
Score = 154 bits (388), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 78/134 (58%), Positives = 93/134 (69%), Gaps = 5/134 (3%)
Query: 72 EEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGEIP 131
EEVR MLWDTAGQEEFDAIT+ YYRGA A VI FST D DSF+A SW+ K+ ECG+I
Sbjct: 57 EEVRFMLWDTAGQEEFDAITRTYYRGAGAAVIAFSTTDLDSFKAVQSWREKINAECGDIA 116
Query: 132 TVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLT---TKCL-- 186
LVQNK+DL+D++VV PEE + L+R LG +L RT VKE+INV +F YL K L
Sbjct: 117 MCLVQNKVDLIDRAVVTPEEVEALARQLGLKLYRTCVKENINVTEVFGYLAELHHKKLQA 176
Query: 187 SELRQQEEEYSING 200
+L QQ I G
Sbjct: 177 GQLSQQPAAAPITG 190
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 38/53 (71%), Positives = 43/53 (81%)
Query: 9 EEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVS 61
EEVR MLWDTAGQEEFDAIT+ YYRGA A VI FST D DSF+A SW+ K++
Sbjct: 57 EEVRFMLWDTAGQEEFDAITRTYYRGAGAAVIAFSTTDLDSFKAVQSWREKIN 109
>gi|391334451|ref|XP_003741617.1| PREDICTED: ras-related protein Rab-23-like [Metaseiulus
occidentalis]
Length = 216
Score = 153 bits (386), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 71/131 (54%), Positives = 94/131 (71%)
Query: 62 IKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKM 121
++R ++ G VRLM+WDTAGQEEFDA+T+AYYRGA ++ FS+ D SFEA SW+
Sbjct: 44 LERVLEIGNGRCVRLMVWDTAGQEEFDALTRAYYRGAHGAILAFSSTDLQSFEAVDSWRS 103
Query: 122 KVENECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYL 181
KVE ECG +P VLVQNK+DL DQ++V+PE A+ +R RL RTS K+D NV+ FRYL
Sbjct: 104 KVEAECGSLPMVLVQNKMDLADQALVSPEMAENAARRHRLRLYRTSAKQDFNVDEAFRYL 163
Query: 182 TTKCLSELRQQ 192
KC+ L ++
Sbjct: 164 AEKCMEALSRE 174
Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 65/124 (52%), Gaps = 23/124 (18%)
Query: 5 ICEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVS--- 61
I G VRLM+WDTAGQEEFDA+T+AYYRGA ++ FS+ D SFEA SW+ KV
Sbjct: 50 IGNGRCVRLMVWDTAGQEEFDALTRAYYRGAHGAILAFSSTDLQSFEAVDSWRSKVEAEC 109
Query: 62 -------------------IKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACV 102
+ + E RL L+ T+ +++F+ + +A+ A+ C+
Sbjct: 110 GSLPMVLVQNKMDLADQALVSPEMAENAARRHRLRLYRTSAKQDFN-VDEAFRYLAEKCM 168
Query: 103 ITFS 106
S
Sbjct: 169 EALS 172
>gi|159476950|ref|XP_001696574.1| small rab-related GTPase [Chlamydomonas reinhardtii]
gi|158282799|gb|EDP08551.1| small rab-related GTPase [Chlamydomonas reinhardtii]
Length = 174
Score = 152 bits (385), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 71/110 (64%), Positives = 85/110 (77%)
Query: 72 EEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGEIP 131
EEVR MLWDTAGQEEFDAIT+ YYRGA A VI FST D DSF+A SW+ K+ ECG+I
Sbjct: 57 EEVRFMLWDTAGQEEFDAITRTYYRGAGAAVIAFSTTDLDSFKAVQSWREKINAECGDIA 116
Query: 132 TVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYL 181
LVQNK+DL+D++VV PEE + L+R LG +L RT VKE+INV +F YL
Sbjct: 117 MCLVQNKVDLIDRAVVTPEEVEALARQLGLKLYRTCVKENINVTEVFGYL 166
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/53 (71%), Positives = 43/53 (81%)
Query: 9 EEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVS 61
EEVR MLWDTAGQEEFDAIT+ YYRGA A VI FST D DSF+A SW+ K++
Sbjct: 57 EEVRFMLWDTAGQEEFDAITRTYYRGAGAAVIAFSTTDLDSFKAVQSWREKIN 109
>gi|302828466|ref|XP_002945800.1| hypothetical protein VOLCADRAFT_115722 [Volvox carteri f.
nagariensis]
gi|300268615|gb|EFJ52795.1| hypothetical protein VOLCADRAFT_115722 [Volvox carteri f.
nagariensis]
Length = 254
Score = 150 bits (379), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 72/122 (59%), Positives = 89/122 (72%)
Query: 72 EEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGEIP 131
EEVR MLWDTAGQEEFDAIT+ YYRGA A VI FST D +SF+A WK K+ ECG+I
Sbjct: 57 EEVRFMLWDTAGQEEFDAITRTYYRGAGAAVIAFSTTDLESFKAVQGWKDKIIAECGDIA 116
Query: 132 TVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSELRQ 191
LVQNK+DL+DQ+VV PEE + ++R LG +L RT VKE+INV +F YL +L++
Sbjct: 117 MCLVQNKVDLIDQAVVTPEEVEAMARQLGLKLYRTCVKENINVTEVFGYLAELHHKKLQK 176
Query: 192 QE 193
E
Sbjct: 177 GE 178
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/61 (65%), Positives = 44/61 (72%), Gaps = 5/61 (8%)
Query: 9 EEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKE 68
EEVR MLWDTAGQEEFDAIT+ YYRGA A VI FST D +SF+A WK K+ I E
Sbjct: 57 EEVRFMLWDTAGQEEFDAITRTYYRGAGAAVIAFSTTDLESFKAVQGWKDKI-----IAE 111
Query: 69 C 69
C
Sbjct: 112 C 112
>gi|428177061|gb|EKX45943.1| hypothetical protein GUITHDRAFT_159659 [Guillardia theta CCMP2712]
Length = 262
Score = 144 bits (363), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 68/110 (61%), Positives = 86/110 (78%)
Query: 72 EEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGEIP 131
+ + M+WDTAGQEEFDAIT++YYR A CV+ FST+DRDSFEA WK KVE E G+IP
Sbjct: 59 QNITFMVWDTAGQEEFDAITRSYYRNANGCVVAFSTVDRDSFEAVEKWKSKVEAEVGQIP 118
Query: 132 TVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYL 181
VLVQNK+DL+DQSVV+PEE + LS+ L +L RT V E++NV+ +F YL
Sbjct: 119 MVLVQNKVDLIDQSVVSPEEVENLSKKLKLKLYRTCVSENLNVDKVFEYL 168
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 34/52 (65%), Positives = 41/52 (78%)
Query: 9 EEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 60
+ + M+WDTAGQEEFDAIT++YYR A CV+ FST+DRDSFEA WK KV
Sbjct: 59 QNITFMVWDTAGQEEFDAITRSYYRNANGCVVAFSTVDRDSFEAVEKWKSKV 110
>gi|302756885|ref|XP_002961866.1| rab family GTPase [Selaginella moellendorffii]
gi|300170525|gb|EFJ37126.1| rab family GTPase [Selaginella moellendorffii]
Length = 231
Score = 144 bits (362), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 66/110 (60%), Positives = 85/110 (77%)
Query: 72 EEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGEIP 131
E+V+LMLWDTAGQE FD++T+AYYRGA+A V+ FST DR SFE +WK KVE ECG+IP
Sbjct: 58 EQVKLMLWDTAGQEVFDSMTRAYYRGARAAVLCFSTDDRQSFECVKTWKKKVERECGKIP 117
Query: 132 TVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYL 181
LVQNK+DLLDQ+VV+ +EA+ L+ LG R R VK+++ V +F YL
Sbjct: 118 MALVQNKVDLLDQTVVSRQEAEALAEQLGLRFYRICVKQNLYVADVFEYL 167
Score = 79.3 bits (194), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 35/52 (67%), Positives = 43/52 (82%)
Query: 9 EEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 60
E+V+LMLWDTAGQE FD++T+AYYRGA+A V+ FST DR SFE +WK KV
Sbjct: 58 EQVKLMLWDTAGQEVFDSMTRAYYRGARAAVLCFSTDDRQSFECVKTWKKKV 109
>gi|302798048|ref|XP_002980784.1| rab family GTPase [Selaginella moellendorffii]
gi|300151323|gb|EFJ17969.1| rab family GTPase [Selaginella moellendorffii]
Length = 231
Score = 143 bits (360), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 66/110 (60%), Positives = 85/110 (77%)
Query: 72 EEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGEIP 131
E+V+LMLWDTAGQE FD++T+AYYRGA+A V+ FST DR SFE +WK KVE ECG+IP
Sbjct: 58 EQVKLMLWDTAGQEVFDSMTRAYYRGARAAVLCFSTDDRQSFECIKTWKKKVERECGKIP 117
Query: 132 TVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYL 181
LVQNK+DLLDQ+VV+ +EA+ L+ LG R R VK+++ V +F YL
Sbjct: 118 MALVQNKVDLLDQTVVSRQEAEALAEQLGLRFYRICVKQNLYVADVFEYL 167
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/52 (67%), Positives = 43/52 (82%)
Query: 9 EEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 60
E+V+LMLWDTAGQE FD++T+AYYRGA+A V+ FST DR SFE +WK KV
Sbjct: 58 EQVKLMLWDTAGQEVFDSMTRAYYRGARAAVLCFSTDDRQSFECIKTWKKKV 109
>gi|221484494|gb|EEE22788.1| rab23, putative [Toxoplasma gondii GT1]
Length = 212
Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 68/134 (50%), Positives = 89/134 (66%), Gaps = 2/134 (1%)
Query: 64 RTIKECEG--EEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKM 121
R IK+ +G E + LWDTAGQEE+++IT+AYYRGA A VI FST DR SF A H W
Sbjct: 53 RQIKKNDGGDETLTFFLWDTAGQEEYNSITRAYYRGASAAVIVFSTTDRASFHAVHHWHR 112
Query: 122 KVENECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYL 181
K+ ECG++ VLVQNKIDLLDQ+ V P E L + L L RTSVK++IN+ ++F Y+
Sbjct: 113 KITEECGDVICVLVQNKIDLLDQAAVTPAEVAELRKQLNVELFRTSVKDNINIEAVFDYI 172
Query: 182 TTKCLSELRQQEEE 195
+ L + E+
Sbjct: 173 GREFLEPSQSHSEQ 186
>gi|255080678|ref|XP_002503912.1| predicted protein [Micromonas sp. RCC299]
gi|226519179|gb|ACO65170.1| predicted protein [Micromonas sp. RCC299]
Length = 272
Score = 140 bits (353), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 65/111 (58%), Positives = 82/111 (73%)
Query: 71 GEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGEI 130
GE+VR+M+WDTAGQEEFD IT+ YYRGA A ++ FST DR SFEA WK KVE+ CG I
Sbjct: 59 GEDVRVMVWDTAGQEEFDTITRTYYRGAGAALLVFSTTDRASFEAIEEWKRKVEDVCGPI 118
Query: 131 PTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYL 181
+ QNK+D++D+S VAPEEA+ L R LG + R VKE+ NV+ +F YL
Sbjct: 119 VMCVCQNKVDMIDESAVAPEEAEDLCRRLGLKFYRVCVKENFNVDKVFDYL 169
Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/53 (67%), Positives = 42/53 (79%)
Query: 8 GEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 60
GE+VR+M+WDTAGQEEFD IT+ YYRGA A ++ FST DR SFEA WK KV
Sbjct: 59 GEDVRVMVWDTAGQEEFDTITRTYYRGAGAALLVFSTTDRASFEAIEEWKRKV 111
>gi|167524138|ref|XP_001746405.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163775167|gb|EDQ88792.1| predicted protein [Monosiga brevicollis MX1]
Length = 227
Score = 140 bits (352), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 67/115 (58%), Positives = 91/115 (79%)
Query: 68 ECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENEC 127
+ GE++RLM+WDTAGQEEFD++TKAYYR A+ACV+ FSTIDR SFEA SW KVE E
Sbjct: 52 QVSGEDLRLMIWDTAGQEEFDSMTKAYYRDAEACVVAFSTIDRASFEAVKSWIGKVEAEV 111
Query: 128 GEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLT 182
G IP VL+QNKIDL+D +V+ EEA+ L++ + + RTSV+E+ N++ +F+YL+
Sbjct: 112 GSIPMVLIQNKIDLVDDAVMTKEEAEELAKEVKLKFYRTSVQENYNIDEVFKYLS 166
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 39/53 (73%), Positives = 46/53 (86%)
Query: 8 GEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 60
GE++RLM+WDTAGQEEFD++TKAYYR A+ACV+ FSTIDR SFEA SW KV
Sbjct: 55 GEDLRLMIWDTAGQEEFDSMTKAYYRDAEACVVAFSTIDRASFEAVKSWIGKV 107
>gi|410959474|ref|XP_003986333.1| PREDICTED: ras-related protein Rab-23-like [Felis catus]
Length = 231
Score = 136 bits (342), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 71/125 (56%), Positives = 83/125 (66%), Gaps = 14/125 (11%)
Query: 72 EEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGEIP 131
E+VRLMLWDTAGQEEFDAITKAYYRGAQACV+ FST DR+SFEA SW+ KV E G+IP
Sbjct: 56 EDVRLMLWDTAGQEEFDAITKAYYRGAQACVLVFSTTDRESFEAISSWREKVVAEVGDIP 115
Query: 132 TVLVQNKIDLLDQSVVAPEEADLLSRA----LGCRLMRTSVKEDINVNSIFRYLTTKCLS 187
TVLVQNKIDLLD S + L+ GC + +F+YL K L
Sbjct: 116 TVLVQNKIDLLDDSCIKKHRPTLIPVGEETIQGCE----------DQEEVFKYLAEKYLQ 165
Query: 188 ELRQQ 192
+L+QQ
Sbjct: 166 KLKQQ 170
Score = 96.3 bits (238), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 43/52 (82%), Positives = 47/52 (90%)
Query: 9 EEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 60
E+VRLMLWDTAGQEEFDAITKAYYRGAQACV+ FST DR+SFEA SW+ KV
Sbjct: 56 EDVRLMLWDTAGQEEFDAITKAYYRGAQACVLVFSTTDRESFEAISSWREKV 107
>gi|384248626|gb|EIE22109.1| ras-domain-containing protein [Coccomyxa subellipsoidea C-169]
Length = 223
Score = 135 bits (341), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 63/135 (46%), Positives = 93/135 (68%)
Query: 47 RDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFS 106
R ++ ++ M V ++ E+V+LMLWDTAGQE F +IT++YY+GA+A V+ FS
Sbjct: 29 RATYSDEYTKTMGVDFMEKVQRVGSEDVKLMLWDTAGQEGFTSITRSYYKGAEAAVLVFS 88
Query: 107 TIDRDSFEAAHSWKMKVENECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
T DR SFEA +W+ KV +ECG++ L+QNK+DL++QS V+ EE + ++R L L R
Sbjct: 89 TTDRASFEALPAWRDKVLDECGDVAMALLQNKVDLIEQSAVSSEEVEAMARRLNLCLYRG 148
Query: 167 SVKEDINVNSIFRYL 181
V+ED+NV S+F YL
Sbjct: 149 CVREDLNVESVFTYL 163
Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 33/52 (63%), Positives = 43/52 (82%)
Query: 9 EEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 60
E+V+LMLWDTAGQE F +IT++YY+GA+A V+ FST DR SFEA +W+ KV
Sbjct: 54 EDVKLMLWDTAGQEGFTSITRSYYKGAEAAVLVFSTTDRASFEALPAWRDKV 105
>gi|449678021|ref|XP_002154473.2| PREDICTED: ras-related protein Rab-23-like [Hydra magnipapillata]
Length = 217
Score = 135 bits (341), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 70/121 (57%), Positives = 90/121 (74%), Gaps = 2/121 (1%)
Query: 71 GEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENECG-E 129
GE+VRLMLWDTAGQEEFDAITKAYYRGAQACV+TFS +D S+ A WK KV ECG
Sbjct: 55 GEDVRLMLWDTAGQEEFDAITKAYYRGAQACVLTFSVVDYASYAAIVRWKEKVVVECGAN 114
Query: 130 IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSEL 189
IP VLVQNK+DL++ +VV E+A+ L+++L L TSVKE++ V+ + Y + +S +
Sbjct: 115 IPMVLVQNKMDLIESAVVRQEDAENLAKSLRVNLYCTSVKENVGVSDV-PYYREQLISAI 173
Query: 190 R 190
R
Sbjct: 174 R 174
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/93 (54%), Positives = 60/93 (64%), Gaps = 10/93 (10%)
Query: 8 GEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVSIKRTIK 67
GE+VRLMLWDTAGQEEFDAITKAYYRGAQACV+TFS +D S+ A WK KV +
Sbjct: 55 GEDVRLMLWDTAGQEEFDAITKAYYRGAQACVLTFSVVDYASYAAIVRWKEKVVV----- 109
Query: 68 ECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQA 100
EC G + ++L Q + D I A R A
Sbjct: 110 EC-GANIPMVL----VQNKMDLIESAVVRQEDA 137
>gi|294941013|ref|XP_002782969.1| Rab11, putative [Perkinsus marinus ATCC 50983]
gi|239895151|gb|EER14765.1| Rab11, putative [Perkinsus marinus ATCC 50983]
Length = 198
Score = 135 bits (339), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 65/126 (51%), Positives = 86/126 (68%)
Query: 63 KRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMK 122
KR E GEE+ +LWDTAGQEE+DAIT+ YY+GA A +I FST+DR SFEA SW K
Sbjct: 50 KRMWIESAGEELTFLLWDTAGQEEYDAITRGYYKGAGAAIIAFSTVDRASFEAVESWHKK 109
Query: 123 VENECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLT 182
+ +ECG+I +LVQ K+DL+DQ+V +EA+ LSR L L RT V ++N+ F L
Sbjct: 110 IVDECGQIIMLLVQTKVDLIDQAVFTAQEAESLSRKLRIPLYRTCVSANLNIEDAFLALG 169
Query: 183 TKCLSE 188
K L++
Sbjct: 170 EKFLAK 175
Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/93 (46%), Positives = 60/93 (64%), Gaps = 11/93 (11%)
Query: 8 GEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVSIKRTIK 67
GEE+ +LWDTAGQEE+DAIT+ YY+GA A +I FST+DR SFEA SW K+ +
Sbjct: 58 GEELTFLLWDTAGQEEYDAITRGYYKGAGAAIIAFSTVDRASFEAVESWH-----KKIVD 112
Query: 68 ECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQA 100
EC G+ + L++ Q + D I +A + +A
Sbjct: 113 EC-GQIIMLLV-----QTKVDLIDQAVFTAQEA 139
>gi|146102517|ref|XP_001469355.1| putative small G-protein [Leishmania infantum JPCM5]
gi|134073725|emb|CAM72462.1| putative small G-protein [Leishmania infantum JPCM5]
Length = 296
Score = 130 bits (328), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 61/122 (50%), Positives = 81/122 (66%)
Query: 74 VRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGEIPTV 133
V+LMLWDTAGQE F+A+T+AYYRGA A ++TFST+DRDSF WK +VE+ CG I V
Sbjct: 59 VKLMLWDTAGQEVFNALTQAYYRGAGAAILTFSTVDRDSFMNIAGWKQRVESVCGPITMV 118
Query: 134 LVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSELRQQE 193
L Q K DL ++V+ EA+ L+ LG L R S K+D NV +F + +C+ Q E
Sbjct: 119 LCQTKFDLSHEAVITNTEAEKLANQLGVPLFRVSTKDDFNVTQLFEFTAQQCVENSAQDE 178
Query: 194 EE 195
E+
Sbjct: 179 EQ 180
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/50 (66%), Positives = 41/50 (82%)
Query: 11 VRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 60
V+LMLWDTAGQE F+A+T+AYYRGA A ++TFST+DRDSF WK +V
Sbjct: 59 VKLMLWDTAGQEVFNALTQAYYRGAGAAILTFSTVDRDSFMNIAGWKQRV 108
>gi|398025204|ref|XP_003865763.1| small G-protein, putative [Leishmania donovani]
gi|322504000|emb|CBZ39087.1| small G-protein, putative [Leishmania donovani]
Length = 296
Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 61/122 (50%), Positives = 81/122 (66%)
Query: 74 VRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGEIPTV 133
V+LMLWDTAGQE F+A+T+AYYRGA A ++TFST+DRDSF WK +VE+ CG I V
Sbjct: 59 VKLMLWDTAGQEVFNALTQAYYRGAGAAILTFSTVDRDSFMNIAGWKQRVESVCGPITMV 118
Query: 134 LVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSELRQQE 193
L Q K DL ++V+ EA+ L+ LG L R S K+D NV +F + +C+ Q E
Sbjct: 119 LCQTKFDLSHEAVITNTEAEKLANQLGVPLFRVSTKDDFNVTQLFEFTAQQCVENSAQDE 178
Query: 194 EE 195
E+
Sbjct: 179 EQ 180
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/50 (66%), Positives = 41/50 (82%)
Query: 11 VRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 60
V+LMLWDTAGQE F+A+T+AYYRGA A ++TFST+DRDSF WK +V
Sbjct: 59 VKLMLWDTAGQEVFNALTQAYYRGAGAAILTFSTVDRDSFMNIAGWKQRV 108
>gi|154346666|ref|XP_001569270.1| putative small G-protein [Leishmania braziliensis MHOM/BR/75/M2904]
gi|134066612|emb|CAM44410.1| putative small G-protein [Leishmania braziliensis MHOM/BR/75/M2904]
Length = 299
Score = 126 bits (317), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 58/120 (48%), Positives = 80/120 (66%)
Query: 74 VRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGEIPTV 133
V+LMLWDTAGQE F+A+T+AYYRGA A ++ FS++DRDSF + +WK +VE+ CG I V
Sbjct: 58 VKLMLWDTAGQEVFNALTQAYYRGAGAAILAFSSVDRDSFMSVSAWKQRVESVCGPITMV 117
Query: 134 LVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSELRQQE 193
L Q K DL ++V+ EA+ L+ L L R S K+D NV +F + +C+S Q E
Sbjct: 118 LCQTKFDLSHEAVITNAEAEKLANQLEVPLFRVSTKDDFNVTQLFEFAAQRCVSSATQDE 177
Score = 76.6 bits (187), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 31/50 (62%), Positives = 42/50 (84%)
Query: 11 VRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 60
V+LMLWDTAGQE F+A+T+AYYRGA A ++ FS++DRDSF + +WK +V
Sbjct: 58 VKLMLWDTAGQEVFNALTQAYYRGAGAAILAFSSVDRDSFMSVSAWKQRV 107
>gi|71408878|ref|XP_806815.1| small G-protein [Trypanosoma cruzi strain CL Brener]
gi|70870670|gb|EAN84964.1| small G-protein, putative [Trypanosoma cruzi]
Length = 230
Score = 126 bits (317), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 59/115 (51%), Positives = 76/115 (66%)
Query: 74 VRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGEIPTV 133
V+LMLWDTAGQE F+++T+AYYRGA A ++ FST+D+DSF SWK VEN CG I V
Sbjct: 59 VKLMLWDTAGQEVFNSLTQAYYRGAGAAIVAFSTVDKDSFMNVESWKKNVENVCGSILMV 118
Query: 134 LVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSE 188
L Q K DL ++ V EEA+ L+ L R S K+D NV +F Y + CL+E
Sbjct: 119 LCQTKFDLAHEAAVTNEEAEQLAIQLQLPFFRVSTKDDFNVTQLFEYTASMCLNE 173
Score = 75.9 bits (185), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 31/50 (62%), Positives = 40/50 (80%)
Query: 11 VRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 60
V+LMLWDTAGQE F+++T+AYYRGA A ++ FST+D+DSF SWK V
Sbjct: 59 VKLMLWDTAGQEVFNSLTQAYYRGAGAAIVAFSTVDKDSFMNVESWKKNV 108
>gi|407410164|gb|EKF32708.1| small G-protein, putative [Trypanosoma cruzi marinkellei]
Length = 230
Score = 126 bits (316), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 58/115 (50%), Positives = 76/115 (66%)
Query: 74 VRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGEIPTV 133
V+LMLWDTAGQE F+++T+AYYRGA A ++ FST+D+DSF +WK VEN CG I V
Sbjct: 59 VKLMLWDTAGQEVFNSLTQAYYRGAGAAIVAFSTVDKDSFMNVENWKKNVENVCGSISMV 118
Query: 134 LVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSE 188
L Q K DL ++ V EEA+ L+ L R S K+D NV +F Y + CL+E
Sbjct: 119 LCQTKFDLAHEAAVTNEEAEQLAIQLQLPFFRVSTKDDFNVTQLFEYTASMCLNE 173
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 40/50 (80%)
Query: 11 VRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 60
V+LMLWDTAGQE F+++T+AYYRGA A ++ FST+D+DSF +WK V
Sbjct: 59 VKLMLWDTAGQEVFNSLTQAYYRGAGAAIVAFSTVDKDSFMNVENWKKNV 108
>gi|426353629|ref|XP_004044291.1| PREDICTED: ras-related protein Rab-23 [Gorilla gorilla gorilla]
Length = 192
Score = 126 bits (316), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 60/96 (62%), Positives = 73/96 (76%)
Query: 97 GAQACVITFSTIDRDSFEAAHSWKMKVENECGEIPTVLVQNKIDLLDQSVVAPEEADLLS 156
GAQACV+ FST DR+SFEA SW+ KV E G+IPTVLVQNKIDLLD S + EEA+ L+
Sbjct: 36 GAQACVLVFSTTDRESFEAVSSWREKVVAEVGDIPTVLVQNKIDLLDDSYIKNEEAEALA 95
Query: 157 RALGCRLMRTSVKEDINVNSIFRYLTTKCLSELRQQ 192
+ L R RTSVKED+NVN +F+YL K L +L+QQ
Sbjct: 96 KRLKLRFYRTSVKEDLNVNEVFKYLAEKYLQKLKQQ 131
Score = 45.8 bits (107), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/27 (70%), Positives = 22/27 (81%)
Query: 34 GAQACVITFSTIDRDSFEAAHSWKMKV 60
GAQACV+ FST DR+SFEA SW+ KV
Sbjct: 36 GAQACVLVFSTTDRESFEAVSSWREKV 62
>gi|348681705|gb|EGZ21521.1| hypothetical protein PHYSODRAFT_387258 [Phytophthora sojae]
Length = 276
Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 59/116 (50%), Positives = 81/116 (69%)
Query: 71 GEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGEI 130
GE + LM+WDTAGQEEFD +T YY+GA A + FST+DR SF+ W+ KVE ECG+I
Sbjct: 60 GETINLMIWDTAGQEEFDTLTSRYYKGAGAVIYVFSTVDRASFDDLPKWRRKVEEECGQI 119
Query: 131 PTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCL 186
+VLVQNKIDL D + + +E + ++ L RL R+ V+++INV +FRYL + L
Sbjct: 120 CSVLVQNKIDLEDDAKMTRDEVEDMADFLSMRLYRSCVQDNINVGEVFRYLCRRFL 175
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/53 (56%), Positives = 38/53 (71%)
Query: 8 GEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 60
GE + LM+WDTAGQEEFD +T YY+GA A + FST+DR SF+ W+ KV
Sbjct: 60 GETINLMIWDTAGQEEFDTLTSRYYKGAGAVIYVFSTVDRASFDDLPKWRRKV 112
>gi|303271331|ref|XP_003055027.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226463001|gb|EEH60279.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 167
Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 64/117 (54%), Positives = 80/117 (68%), Gaps = 3/117 (2%)
Query: 68 ECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENEC 127
E GE+VRLM+WDTAGQEEFD IT++YYRGA A VI FST DR SF+A SWK K+ E
Sbjct: 48 ESVGEDVRLMIWDTAGQEEFDTITRSYYRGAGAAVIVFSTTDRASFDAVRSWKQKLSEEV 107
Query: 128 G-EIPTVLVQNK--IDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYL 181
G ++ T +VQNK L V P EA+ L+R LG + R VKE+ NV+++F YL
Sbjct: 108 GDDVATCVVQNKGASHLTPACAVEPGEAETLARELGVKFFRACVKENFNVDNVFDYL 164
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 39/54 (72%), Positives = 45/54 (83%)
Query: 8 GEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVS 61
GE+VRLM+WDTAGQEEFD IT++YYRGA A VI FST DR SF+A SWK K+S
Sbjct: 51 GEDVRLMIWDTAGQEEFDTITRSYYRGAGAAVIVFSTTDRASFDAVRSWKQKLS 104
>gi|71652330|ref|XP_814824.1| small G-protein [Trypanosoma cruzi strain CL Brener]
gi|3452220|gb|AAC32778.1| small G-protein [Trypanosoma cruzi]
gi|70879830|gb|EAN92973.1| small G-protein, putative [Trypanosoma cruzi]
Length = 229
Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 58/115 (50%), Positives = 76/115 (66%)
Query: 74 VRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGEIPTV 133
V+LMLWDTAGQE F+++T+AYYRGA A ++ FST+D+DSF +WK VEN CG I V
Sbjct: 59 VKLMLWDTAGQEVFNSLTQAYYRGAGAAIVAFSTVDKDSFMNVENWKKNVENVCGSILMV 118
Query: 134 LVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSE 188
L Q K DL ++ V EEA+ L+ L R S K+D NV +F Y + CL+E
Sbjct: 119 LCQTKFDLAHEAAVTNEEAEQLAIQLQLPFFRVSTKDDFNVTQLFEYTASMCLNE 173
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 40/50 (80%)
Query: 11 VRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 60
V+LMLWDTAGQE F+++T+AYYRGA A ++ FST+D+DSF +WK V
Sbjct: 59 VKLMLWDTAGQEVFNSLTQAYYRGAGAAIVAFSTVDKDSFMNVENWKKNV 108
>gi|444728498|gb|ELW68955.1| Ras-related protein Rab-30 [Tupaia chinensis]
Length = 263
Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 71/185 (38%), Positives = 105/185 (56%), Gaps = 4/185 (2%)
Query: 8 GEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVSIKRTIK 67
GE+V+L +WDTAGQE F +IT++YYR A A ++T+ +SF W ++ + K
Sbjct: 55 GEKVKLQIWDTAGQERFRSITQSYYRSANALILTYDITCEESFRCLPEWLREIEQYASNK 114
Query: 68 ECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVEN-E 126
V L +WDTAGQE F +IT++YYR A A ++T+ +SF W ++E
Sbjct: 115 VI---TVLLQIWDTAGQERFRSITQSYYRSANALILTYDITCEESFRCLPEWLREIEQYA 171
Query: 127 CGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCL 186
++ TVLV NKIDL ++ V+ + A+ S A + TS KE NV +F L + +
Sbjct: 172 SNKVITVLVGNKIDLAERREVSQQRAEEFSEAQDMYYLETSAKESDNVEKLFLDLACRLI 231
Query: 187 SELRQ 191
SE RQ
Sbjct: 232 SEARQ 236
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 44/70 (62%), Gaps = 1/70 (1%)
Query: 68 ECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVEN-E 126
E GE+V+L +WDTAGQE F +IT++YYR A A ++T+ +SF W ++E
Sbjct: 52 EINGEKVKLQIWDTAGQERFRSITQSYYRSANALILTYDITCEESFRCLPEWLREIEQYA 111
Query: 127 CGEIPTVLVQ 136
++ TVL+Q
Sbjct: 112 SNKVITVLLQ 121
>gi|119624882|gb|EAX04477.1| RAB23, member RAS oncogene family, isoform CRA_b [Homo sapiens]
Length = 173
Score = 124 bits (311), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 60/96 (62%), Positives = 73/96 (76%)
Query: 97 GAQACVITFSTIDRDSFEAAHSWKMKVENECGEIPTVLVQNKIDLLDQSVVAPEEADLLS 156
GAQACV+ FST DR+SFEA SW+ KV E G+IPTVLVQNKIDLLD S + EEA+ L+
Sbjct: 17 GAQACVLVFSTTDRESFEAVSSWREKVVAEVGDIPTVLVQNKIDLLDDSCIKNEEAEALA 76
Query: 157 RALGCRLMRTSVKEDINVNSIFRYLTTKCLSELRQQ 192
+ L R RTSVKED+NVN +F+YL K L +L+QQ
Sbjct: 77 KRLKLRFYRTSVKEDLNVNEVFKYLAEKYLQKLKQQ 112
Score = 45.4 bits (106), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 19/27 (70%), Positives = 22/27 (81%)
Query: 34 GAQACVITFSTIDRDSFEAAHSWKMKV 60
GAQACV+ FST DR+SFEA SW+ KV
Sbjct: 17 GAQACVLVFSTTDRESFEAVSSWREKV 43
>gi|301107143|ref|XP_002902654.1| ras family GTPase, putative [Phytophthora infestans T30-4]
gi|262098528|gb|EEY56580.1| ras family GTPase, putative [Phytophthora infestans T30-4]
Length = 280
Score = 123 bits (309), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 59/116 (50%), Positives = 79/116 (68%)
Query: 71 GEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGEI 130
GE ++LM+W TAGQEEFD +T YY+GA A + FST+DR SF+ WK KVE ECG I
Sbjct: 60 GETIKLMIWVTAGQEEFDTLTSRYYKGAGAVIYVFSTVDRASFDDLPKWKRKVEEECGPI 119
Query: 131 PTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCL 186
+VLVQNKIDL D + + +E + ++ L RL R V+++INV +FRYL + L
Sbjct: 120 CSVLVQNKIDLEDDAAMTRDEVEDMADYLNMRLYRACVQDNINVGEVFRYLCRRFL 175
Score = 69.7 bits (169), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 30/53 (56%), Positives = 38/53 (71%)
Query: 8 GEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 60
GE ++LM+W TAGQEEFD +T YY+GA A + FST+DR SF+ WK KV
Sbjct: 60 GETIKLMIWVTAGQEEFDTLTSRYYKGAGAVIYVFSTVDRASFDDLPKWKRKV 112
>gi|407849599|gb|EKG04298.1| small G-protein, putative [Trypanosoma cruzi]
Length = 317
Score = 123 bits (308), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 57/115 (49%), Positives = 76/115 (66%)
Query: 74 VRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGEIPTV 133
V+LMLWDTAGQE F+++T+AYYRGA A ++ FST+D+DSF +WK VEN CG + V
Sbjct: 146 VKLMLWDTAGQEVFNSLTQAYYRGAGAAIVAFSTVDKDSFMNVENWKKNVENVCGSVLMV 205
Query: 134 LVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSE 188
L Q K DL ++ V EEA+ L+ L R S K+D NV +F Y + CL+E
Sbjct: 206 LCQTKFDLAHEAAVTNEEAEQLAIQLQLPFFRVSTKDDFNVTQLFEYTASMCLNE 260
Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 40/50 (80%)
Query: 11 VRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 60
V+LMLWDTAGQE F+++T+AYYRGA A ++ FST+D+DSF +WK V
Sbjct: 146 VKLMLWDTAGQEVFNSLTQAYYRGAGAAIVAFSTVDKDSFMNVENWKKNV 195
>gi|427778911|gb|JAA54907.1| Putative rab35 member ras oncoprotein family [Rhipicephalus
pulchellus]
Length = 257
Score = 122 bits (306), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 65/193 (33%), Positives = 100/193 (51%), Gaps = 6/193 (3%)
Query: 6 CEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVSIKRT 65
+GE V+L +WDTAGQE F + G + ++ F+ ++F + + V K
Sbjct: 52 VDGERVKLQIWDTAGQERFRGDSGV---GKSSLLLRFAD---NTFTGNYITTIGVDFKIR 105
Query: 66 IKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVEN 125
E +GE V+L +WDTAGQE F IT YYRG V+ + + +SF W ++E
Sbjct: 106 TLEVDGERVKLQIWDTAGQERFRTITSTYYRGTHGVVVVYDVTNGESFANVKRWLHEIEQ 165
Query: 126 ECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLTTKC 185
C + +LV NK D + VV E+A + +G +L TS KE+INV +F +T
Sbjct: 166 NCDVVNRILVGNKNDDPSRKVVLTEDAQRFADQMGIQLFETSAKENINVEEMFNAITRMV 225
Query: 186 LSELRQQEEEYSI 198
L ++Q+E +
Sbjct: 226 LKSKKEQKERQQV 238
>gi|157877830|ref|XP_001687213.1| putative small G-protein [Leishmania major strain Friedlin]
gi|68130288|emb|CAJ09600.1| putative small G-protein [Leishmania major strain Friedlin]
Length = 297
Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/132 (46%), Positives = 82/132 (62%), Gaps = 2/132 (1%)
Query: 74 VRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGEIPTV 133
V+LMLWDTAGQE F+A+T+AYYRGA A ++TFST+DRDS + WK +VE+ CG I V
Sbjct: 59 VKLMLWDTAGQEVFNALTQAYYRGAGAAILTFSTVDRDSLMSIAGWKQRVESVCGCITMV 118
Query: 134 LVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSELRQQE 193
L Q K DL ++V+ EA+ L+ L L R S K+D NV +F + +C+ Q E
Sbjct: 119 LCQTKFDLSHEAVITHAEAEGLASQLEVPLFRVSAKDDFNVRQLFEFTAQQCVENSAQDE 178
Query: 194 EEYS--INGNGL 203
NGN L
Sbjct: 179 APVDDMPNGNRL 190
Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 32/50 (64%), Positives = 41/50 (82%)
Query: 11 VRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 60
V+LMLWDTAGQE F+A+T+AYYRGA A ++TFST+DRDS + WK +V
Sbjct: 59 VKLMLWDTAGQEVFNALTQAYYRGAGAAILTFSTVDRDSLMSIAGWKQRV 108
>gi|47118290|gb|AAT11256.1| small GTP-binding protein [Holosticha sp. WJC-2003]
Length = 261
Score = 121 bits (304), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 60/137 (43%), Positives = 84/137 (61%), Gaps = 2/137 (1%)
Query: 63 KRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMK 122
K IKE E+V +WDTAGQEE++++T+ YY+GA AC++ FS DR+SF W+
Sbjct: 48 KHFIKELX-EDVEFYIWDTAGQEEYNSLTRKYYKGASACILAFSITDRESFNHVEKWRDA 106
Query: 123 VENECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLT 182
E ECG IP VLVQ KIDL+DQ+ + +E + L++ L L R K+ I + +F YL
Sbjct: 107 AEEECGNIPMVLVQTKIDLIDQATMTTQETEALAKKLQLPLFRICSKDGIMITELFEYLA 166
Query: 183 TKCLSE-LRQQEEEYSI 198
K S+ L +QE I
Sbjct: 167 VKFFSKNLHKQEGHAPI 183
Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 36/49 (73%)
Query: 9 EEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWK 57
E+V +WDTAGQEE++++T+ YY+GA AC++ FS DR+SF W+
Sbjct: 56 EDVEFYIWDTAGQEEYNSLTRKYYKGASACILAFSITDRESFNHVEKWR 104
>gi|401420990|ref|XP_003874984.1| putative small G-protein [Leishmania mexicana MHOM/GT/2001/U1103]
gi|322491220|emb|CBZ26485.1| putative small G-protein [Leishmania mexicana MHOM/GT/2001/U1103]
Length = 296
Score = 119 bits (297), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 58/122 (47%), Positives = 77/122 (63%)
Query: 74 VRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGEIPTV 133
V+LMLWDTAGQE F+A+T+AYYRGA A ++ FST+DRDSF WK +VE+ C I V
Sbjct: 59 VKLMLWDTAGQEVFNALTQAYYRGAGAAILMFSTVDRDSFMNIAGWKQRVESVCDPITMV 118
Query: 134 LVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSELRQQE 193
L Q K DL ++V+ EA+ L+ L L R S K+D NV +F + C+ Q E
Sbjct: 119 LCQTKFDLSHEAVITNTEAEKLANQLELPLFRVSTKDDFNVTQLFEFTAQLCVENSAQDE 178
Query: 194 EE 195
E+
Sbjct: 179 EK 180
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/50 (64%), Positives = 40/50 (80%)
Query: 11 VRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 60
V+LMLWDTAGQE F+A+T+AYYRGA A ++ FST+DRDSF WK +V
Sbjct: 59 VKLMLWDTAGQEVFNALTQAYYRGAGAAILMFSTVDRDSFMNIAGWKQRV 108
>gi|290995484|ref|XP_002680325.1| hypothetical protein NAEGRDRAFT_31544 [Naegleria gruberi]
gi|284093945|gb|EFC47581.1| hypothetical protein NAEGRDRAFT_31544 [Naegleria gruberi]
Length = 179
Score = 117 bits (294), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 55/114 (48%), Positives = 79/114 (69%), Gaps = 2/114 (1%)
Query: 63 KRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMK 122
++ I + E V MLWDTAGQ +F +T+ YYRGA+ ++ FST DR SFEA +W K
Sbjct: 41 QQYIPDPINEAVTFMLWDTAGQVKFADMTRQYYRGAKGAILVFSTTDRRSFEAIKAWNEK 100
Query: 123 VENECGE--IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINV 174
V+ +C + + VL+QNKIDL+DQ+V+ P EA++L+ LG + R SVKE++NV
Sbjct: 101 VDTQCDDTNLCKVLIQNKIDLIDQAVIQPSEAEVLATELGIKFFRASVKENLNV 154
Score = 66.2 bits (160), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 29/53 (54%), Positives = 36/53 (67%)
Query: 8 GEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 60
E V MLWDTAGQ +F +T+ YYRGA+ ++ FST DR SFEA +W KV
Sbjct: 49 NEAVTFMLWDTAGQVKFADMTRQYYRGAKGAILVFSTTDRRSFEAIKAWNEKV 101
>gi|340716064|ref|XP_003396523.1| PREDICTED: ras-related protein Rab-23-like [Bombus terrestris]
Length = 142
Score = 114 bits (284), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 50/81 (61%), Positives = 69/81 (85%)
Query: 116 AHSWKMKVENECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVN 175
A++ K VENECGEIPTVLVQNK+DL+DQ V+ P+EA+ L RALGC+L+RTSVKED+ V
Sbjct: 2 ANTDKKHVENECGEIPTVLVQNKMDLVDQCVIDPDEAERLGRALGCKLLRTSVKEDVGVM 61
Query: 176 SIFRYLTTKCLSELRQQEEEY 196
S+FR+L ++CL E+R+ +++Y
Sbjct: 62 SVFRHLASRCLHEMRRCDDDY 82
>gi|332030618|gb|EGI70306.1| Ras-related protein Rab-35 [Acromyrmex echinatior]
Length = 201
Score = 106 bits (264), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 88/168 (52%), Gaps = 3/168 (1%)
Query: 34 GAQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKA 93
G + ++ F+ ++F ++ + V K E +GE V+L +WDTAGQE F IT
Sbjct: 20 GKSSLLLRFAD---NTFNGSYITTIGVDFKIQTVEVDGERVKLQIWDTAGQERFRTITST 76
Query: 94 YYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGEIPTVLVQNKIDLLDQSVVAPEEAD 153
YYRG ++ + D+F W ++E C + VLV NK D +Q VV E+A
Sbjct: 77 YYRGTHGVIVVYDVTSGDTFANVKRWLHEIEQNCDVVNRVLVGNKNDAPNQKVVLTEDAQ 136
Query: 154 LLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSELRQQEEEYSINGN 201
+ +G +L TS K++INV +F +T + L ++++E +I N
Sbjct: 137 RFANQMGIQLFETSAKDNINVEEMFMAITRQVLRTKKERKERQAIQTN 184
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 28/51 (54%)
Query: 6 CEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
+GE V+L +WDTAGQE F IT YYRG ++ + D+F W
Sbjct: 52 VDGERVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSGDTFANVKRW 102
>gi|322790897|gb|EFZ15563.1| hypothetical protein SINV_05542 [Solenopsis invicta]
Length = 184
Score = 106 bits (264), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 82/154 (53%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
++F ++ + V K E +GE V+L +WDTAGQE F IT YYRG ++ +
Sbjct: 14 NTFNGSYITTIGVDFKIQTVEVDGERVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDV 73
Query: 108 IDRDSFEAAHSWKMKVENECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTS 167
D+F W ++E C + VLV NK D +Q VV E+A + +G +L TS
Sbjct: 74 TSGDTFANVKRWLHEIEQNCDVVNRVLVGNKNDAPNQKVVLTEDAQRFANQMGIQLFETS 133
Query: 168 VKEDINVNSIFRYLTTKCLSELRQQEEEYSINGN 201
K++INV +F +T + L ++++E +I N
Sbjct: 134 AKDNINVEEMFMAITRQVLRTKKERKERQAIQTN 167
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 28/51 (54%)
Query: 6 CEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
+GE V+L +WDTAGQE F IT YYRG ++ + D+F W
Sbjct: 35 VDGERVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSGDTFANVKRW 85
>gi|307176976|gb|EFN66282.1| Ras-related protein Rab-35 [Camponotus floridanus]
Length = 201
Score = 106 bits (264), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 88/168 (52%), Gaps = 3/168 (1%)
Query: 34 GAQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKA 93
G + ++ F+ ++F ++ + V K E +GE V+L +WDTAGQE F IT
Sbjct: 20 GKSSLLLRFAD---NTFNGSYITTIGVDFKIQTVEIDGERVKLQIWDTAGQERFRTITST 76
Query: 94 YYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGEIPTVLVQNKIDLLDQSVVAPEEAD 153
YYRG ++ + D+F W ++E C + VLV NK D +Q VV E+A
Sbjct: 77 YYRGTHGVIVVYDVTSGDTFANVKRWLHEIEQNCDVVNRVLVGNKNDAPNQKVVLTEDAQ 136
Query: 154 LLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSELRQQEEEYSINGN 201
+ +G +L TS K++INV +F +T + L ++++E +I N
Sbjct: 137 RFANQMGIQLFETSAKDNINVEEMFMAITRQVLRTKKERKERQAIQTN 184
Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 28/50 (56%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
+GE V+L +WDTAGQE F IT YYRG ++ + D+F W
Sbjct: 53 DGERVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSGDTFANVKRW 102
>gi|307215038|gb|EFN89865.1| Ras-related protein Rab-35 [Harpegnathos saltator]
Length = 189
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 81/154 (52%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
++F ++ + V K E +GE V+L +WDTAGQE F IT YYRG ++ +
Sbjct: 19 NTFNGSYITTIGVDFKIQTVEVDGERVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDV 78
Query: 108 IDRDSFEAAHSWKMKVENECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTS 167
D+F W ++E C + VLV NK D +Q VV E+A + +G +L TS
Sbjct: 79 TSGDTFANVKRWLHEIEQNCDVVNRVLVGNKNDAPNQKVVLTEDAQRFANQMGIQLFETS 138
Query: 168 VKEDINVNSIFRYLTTKCLSELRQQEEEYSINGN 201
K++INV +F +T + L ++ +E +I N
Sbjct: 139 AKDNINVEEMFMAITRQVLRTKKESKERQAIQPN 172
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 28/51 (54%)
Query: 6 CEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
+GE V+L +WDTAGQE F IT YYRG ++ + D+F W
Sbjct: 40 VDGERVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSGDTFANVKRW 90
>gi|195131589|ref|XP_002010233.1| GI14806 [Drosophila mojavensis]
gi|193908683|gb|EDW07550.1| GI14806 [Drosophila mojavensis]
Length = 201
Score = 104 bits (259), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 58/163 (35%), Positives = 84/163 (51%), Gaps = 4/163 (2%)
Query: 34 GAQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKA 93
G + +I FS D+F ++ + V K E G V+L +WDTAGQE F IT
Sbjct: 20 GKSSLLIRFSD---DTFSGSYITTIGVDFKIRTVEINGLRVKLQIWDTAGQERFRTITST 76
Query: 94 YYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGEIPTVLVQNKIDLLDQSVVAPEEAD 153
YYRG +I + + DSF W +++N C + VLV NK D D+ VV E+A
Sbjct: 77 YYRGTHGVIIVYDVTNGDSFANVRRWLEEIQNNCDVVNKVLVGNKNDDPDRKVVITEDAQ 136
Query: 154 LLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLS-ELRQQEEE 195
+R + L TS K++INV +F +T + L +LR +E
Sbjct: 137 RFARQMDIELFETSAKDNINVEDMFLSITRQVLDHKLRTASDE 179
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 27/50 (54%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
G V+L +WDTAGQE F IT YYRG +I + + DSF W
Sbjct: 53 NGLRVKLQIWDTAGQERFRTITSTYYRGTHGVIIVYDVTNGDSFANVRRW 102
>gi|194893325|ref|XP_001977854.1| GG18010 [Drosophila erecta]
gi|195479590|ref|XP_002100946.1| GE17342 [Drosophila yakuba]
gi|190649503|gb|EDV46781.1| GG18010 [Drosophila erecta]
gi|194188470|gb|EDX02054.1| GE17342 [Drosophila yakuba]
Length = 201
Score = 103 bits (258), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 88/173 (50%), Gaps = 4/173 (2%)
Query: 34 GAQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKA 93
G + +I FS D+F ++ + V K + EG V+L +WDTAGQE F IT
Sbjct: 20 GKSSLLIRFSD---DTFSGSYITTIGVDFKIRTVDIEGMRVKLQIWDTAGQERFRTITST 76
Query: 94 YYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGEIPTVLVQNKIDLLDQSVVAPEEAD 153
YYRG ++ + + DSF W +++N C + VLV NK D D+ VV E+A
Sbjct: 77 YYRGTHGVIVVYDVTNGDSFANVRRWLEEIQNNCDVVKKVLVGNKNDDPDRKVVITEDAQ 136
Query: 154 LLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLS-ELRQQEEEYSINGNGLPP 205
++ + L TS K++INV ++F +T + L +LR E + L P
Sbjct: 137 RFAKQMDIELFETSAKDNINVENMFLSITRQVLDHKLRTSPNEQQKDTLHLKP 189
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 28/50 (56%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
EG V+L +WDTAGQE F IT YYRG ++ + + DSF W
Sbjct: 53 EGMRVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTNGDSFANVRRW 102
>gi|291230396|ref|XP_002735152.1| PREDICTED: RAB35, member RAS oncogene family-like [Saccoglossus
kowalevskii]
Length = 203
Score = 103 bits (257), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 88/163 (53%), Gaps = 5/163 (3%)
Query: 34 GAQACVITFSTIDRDSFEAAHSWKMKVSIK-RTIKECEGEEVRLMLWDTAGQEEFDAITK 92
G + ++ F+ ++F + + V K RTI + GE+V+L +WDTAGQE F IT
Sbjct: 20 GKSSLLLRFAD---NTFAGTYITTIGVDFKIRTI-DVNGEKVKLQIWDTAGQERFRTITS 75
Query: 93 AYYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGEIPTVLVQNKIDLLDQSVVAPEEA 152
YYRG ++ + DSF W +++ C ++ +LV NK D ++ VV E+A
Sbjct: 76 TYYRGTHGVIVVYDVTAADSFVNVKRWLHEIDQNCDDVARILVGNKNDCPERKVVVTEDA 135
Query: 153 DLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSELRQQEEE 195
S +G +L TS K++INV +F +T L+ RQ +E+
Sbjct: 136 KRFSEQMGIKLFETSAKDNINVEEMFNAITQLVLNVKRQNQEQ 178
>gi|340728042|ref|XP_003402341.1| PREDICTED: ras-related protein Rab-35-like [Bombus terrestris]
Length = 249
Score = 103 bits (256), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 81/151 (53%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
++F ++ + V K + +GE V+L +WDTAGQE F IT YYRG ++ +
Sbjct: 79 NTFNGSYITTIGVDFKIQTVDIDGERVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDV 138
Query: 108 IDRDSFEAAHSWKMKVENECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTS 167
DSF W ++E C + VLV NK D ++ VV E+A + +G +L TS
Sbjct: 139 TSGDSFANVKRWLHEIEQNCDVVNRVLVGNKNDAPNEKVVLTEDAQRFANQMGIQLFETS 198
Query: 168 VKEDINVNSIFRYLTTKCLSELRQQEEEYSI 198
K++INV +F +T + L ++++E +I
Sbjct: 199 AKDNINVQEMFMAITRQVLRTKKERKERQAI 229
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 28/50 (56%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
+GE V+L +WDTAGQE F IT YYRG ++ + DSF W
Sbjct: 101 DGERVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSGDSFANVKRW 150
>gi|350417672|ref|XP_003491537.1| PREDICTED: ras-related protein Rab-35-like [Bombus impatiens]
Length = 201
Score = 103 bits (256), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 87/165 (52%), Gaps = 3/165 (1%)
Query: 34 GAQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKA 93
G + ++ F+ ++F ++ + V K + +GE V+L +WDTAGQE F IT
Sbjct: 20 GKSSLLLRFAD---NTFNGSYITTIGVDFKIQTVDIDGERVKLQIWDTAGQERFRTITST 76
Query: 94 YYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGEIPTVLVQNKIDLLDQSVVAPEEAD 153
YYRG ++ + DSF W ++E C + VLV NK D ++ VV E+A
Sbjct: 77 YYRGTHGVIVVYDVTSGDSFANVKRWLHEIEQNCDVVNRVLVGNKNDAPNEKVVLTEDAQ 136
Query: 154 LLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSELRQQEEEYSI 198
+ +G +L TS K++INV +F +T + L ++++E +I
Sbjct: 137 RFANQMGIQLFETSAKDNINVQEMFMAITRQVLRTKKERKERQAI 181
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 28/50 (56%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
+GE V+L +WDTAGQE F IT YYRG ++ + DSF W
Sbjct: 53 DGERVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSGDSFANVKRW 102
>gi|328790442|ref|XP_003251420.1| PREDICTED: ras-related protein Rab-35-like [Apis mellifera]
gi|380017688|ref|XP_003692779.1| PREDICTED: ras-related protein Rab-35-like [Apis florea]
Length = 201
Score = 102 bits (255), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 81/151 (53%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
++F ++ + V K + +GE V+L +WDTAGQE F IT YYRG ++ +
Sbjct: 31 NTFNGSYITTIGVDFKIQTVDVDGERVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDV 90
Query: 108 IDRDSFEAAHSWKMKVENECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTS 167
DSF W ++E C + VLV NK D ++ VV E+A + +G +L TS
Sbjct: 91 TSGDSFANVKRWLHEIEQNCDVVNRVLVGNKNDAPNEKVVLTEDAQRFANQMGIQLFETS 150
Query: 168 VKEDINVNSIFRYLTTKCLSELRQQEEEYSI 198
K+++NV +F +T + L ++++E +I
Sbjct: 151 AKDNVNVQEMFMAITRQVLRTKKERKERQAI 181
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 28/51 (54%)
Query: 6 CEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
+GE V+L +WDTAGQE F IT YYRG ++ + DSF W
Sbjct: 52 VDGERVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSGDSFANVKRW 102
>gi|383852954|ref|XP_003701990.1| PREDICTED: ras-related protein Rab-35-like [Megachile rotundata]
Length = 201
Score = 102 bits (255), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 87/165 (52%), Gaps = 3/165 (1%)
Query: 34 GAQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKA 93
G + ++ F+ ++F ++ + V K + +GE V+L +WDTAGQE F IT
Sbjct: 20 GKSSLLLRFAD---NTFNGSYITTIGVDFKIQTVDIDGERVKLQIWDTAGQERFRTITST 76
Query: 94 YYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGEIPTVLVQNKIDLLDQSVVAPEEAD 153
YYRG ++ + DSF W ++E C + VLV NK D ++ VV E+A
Sbjct: 77 YYRGTHGVIVVYDVTSGDSFANVKRWLHEIEQNCDVVNRVLVGNKNDSPNEKVVLTEDAQ 136
Query: 154 LLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSELRQQEEEYSI 198
+ +G +L TS K++INV +F +T + L ++++E +I
Sbjct: 137 RFANQMGIQLFETSAKDNINVQEMFMAITRQVLRTKKERKERQAI 181
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 28/50 (56%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
+GE V+L +WDTAGQE F IT YYRG ++ + DSF W
Sbjct: 53 DGERVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSGDSFANVKRW 102
>gi|145552362|ref|XP_001461857.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834352|emb|CAI44523.1| rab_B52 [Paramecium tetraurelia]
gi|124429693|emb|CAK94484.1| unnamed protein product [Paramecium tetraurelia]
Length = 208
Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 84/155 (54%), Gaps = 5/155 (3%)
Query: 50 FEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTID 109
F H + V K E EG++++L +WDTAGQE F ITK YY+GAQ ++T+S ID
Sbjct: 38 FSITHMATLGVDFKIKTIEAEGKKLKLQIWDTAGQERFRTITKTYYKGAQGVILTYSVID 97
Query: 110 RDSFEAAHSWKMKVE--NECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTS 167
R SF+ W ++ ++ VL+ NK D+ + V EE LS+ TS
Sbjct: 98 RQSFQNVDGWLKSIQENTNSSDVQLVLLGNKADMSAERKVTLEEGMKLSQQFNIPFFETS 157
Query: 168 VKEDINVNSIFRYLTTK---CLSELRQQEEEYSIN 199
K ++N+N F+ L+ + LS+++ +E ++N
Sbjct: 158 AKSNMNINEAFQELSQRIIQTLSKMQANDENRNLN 192
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 46/73 (63%), Gaps = 5/73 (6%)
Query: 6 CEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVSIKRT 65
EG++++L +WDTAGQE F ITK YY+GAQ ++T+S IDR SF+ W +K
Sbjct: 57 AEGKKLKLQIWDTAGQERFRTITKTYYKGAQGVILTYSVIDRQSFQNVDGW-----LKSI 111
Query: 66 IKECEGEEVRLML 78
+ +V+L+L
Sbjct: 112 QENTNSSDVQLVL 124
>gi|20129057|ref|NP_608373.1| Rab35, isoform A [Drosophila melanogaster]
gi|320542347|ref|NP_001188678.1| Rab35, isoform B [Drosophila melanogaster]
gi|442617060|ref|NP_001259739.1| Rab35, isoform D [Drosophila melanogaster]
gi|195345901|ref|XP_002039507.1| GM22691 [Drosophila sechellia]
gi|195567823|ref|XP_002107458.1| GD15551 [Drosophila simulans]
gi|7289283|gb|AAF45371.1| Rab35, isoform A [Drosophila melanogaster]
gi|20151577|gb|AAM11148.1| LD21953p [Drosophila melanogaster]
gi|194134733|gb|EDW56249.1| GM22691 [Drosophila sechellia]
gi|194204865|gb|EDX18441.1| GD15551 [Drosophila simulans]
gi|220944822|gb|ACL84954.1| Rab35-PA [synthetic construct]
gi|220954600|gb|ACL89843.1| Rab35-PA [synthetic construct]
gi|318069472|gb|ADV37760.1| Rab35, isoform B [Drosophila melanogaster]
gi|440216975|gb|AGB95578.1| Rab35, isoform D [Drosophila melanogaster]
Length = 201
Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 88/173 (50%), Gaps = 4/173 (2%)
Query: 34 GAQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKA 93
G + +I FS D+F ++ + V K + EG V+L +WDTAGQE F IT
Sbjct: 20 GKSSLLIRFSD---DTFSGSYITTIGVDFKIRTVDIEGMRVKLQIWDTAGQERFRTITST 76
Query: 94 YYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGEIPTVLVQNKIDLLDQSVVAPEEAD 153
YYRG ++ + + +SF W +++N C + VLV NK D D+ VV E+A
Sbjct: 77 YYRGTHGVIVVYDVTNGESFANVRRWLEEIQNNCDVVKKVLVGNKNDDPDRKVVITEDAQ 136
Query: 154 LLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLS-ELRQQEEEYSINGNGLPP 205
++ + L TS K++INV ++F +T + L +LR E + L P
Sbjct: 137 RFAKQMDIELFETSAKDNINVENMFLSITRQVLDHKLRTSPNEQQKDTLHLKP 189
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 28/50 (56%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
EG V+L +WDTAGQE F IT YYRG ++ + + +SF W
Sbjct: 53 EGMRVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTNGESFANVRRW 102
>gi|195438709|ref|XP_002067275.1| GK16335 [Drosophila willistoni]
gi|194163360|gb|EDW78261.1| GK16335 [Drosophila willistoni]
Length = 200
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/163 (34%), Positives = 84/163 (51%), Gaps = 4/163 (2%)
Query: 34 GAQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKA 93
G + +I FS D+F ++ + V K +G V+L +WDTAGQE F IT
Sbjct: 20 GKSSLLIRFSD---DTFSGSYITTIGVDFKIRTVVIDGLRVKLQIWDTAGQERFRTITST 76
Query: 94 YYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGEIPTVLVQNKIDLLDQSVVAPEEAD 153
YYRG +I + + DSF W +++N C + VLV NK D D+ VV E+A
Sbjct: 77 YYRGTHGVIIVYDVTNGDSFANVRRWLEEIQNNCDVVNKVLVGNKNDDPDRKVVITEDAQ 136
Query: 154 LLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLS-ELRQQEEE 195
+R + L TS K++INV +F +T + L+ +LR E
Sbjct: 137 RFARQMDIELYETSAKDNINVEDMFLSITRQVLNHKLRTASNE 179
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 29/52 (55%)
Query: 5 ICEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
+ +G V+L +WDTAGQE F IT YYRG +I + + DSF W
Sbjct: 51 VIDGLRVKLQIWDTAGQERFRTITSTYYRGTHGVIIVYDVTNGDSFANVRRW 102
>gi|195394019|ref|XP_002055643.1| GJ19473 [Drosophila virilis]
gi|194150153|gb|EDW65844.1| GJ19473 [Drosophila virilis]
Length = 201
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 85/163 (52%), Gaps = 4/163 (2%)
Query: 34 GAQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKA 93
G + +I FS D+F ++ + V K +G V+L +WDTAGQE F IT
Sbjct: 20 GKSSLLIRFSD---DTFSGSYITTIGVDFKIRTVVIDGLRVKLQIWDTAGQERFRTITST 76
Query: 94 YYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGEIPTVLVQNKIDLLDQSVVAPEEAD 153
YYRG +I + + DSF W +++N C + VLV NK D D+ VV E+A
Sbjct: 77 YYRGTHGVIIVYDVTNGDSFANVRRWLEEIQNNCDVVNKVLVGNKNDDPDRKVVITEDAQ 136
Query: 154 LLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLS-ELRQQEEE 195
+R + L TS K+++NV +F +T + L+ +LR +E
Sbjct: 137 RFARQMDIELFETSAKDNLNVEDMFLSITRQVLNHKLRTASDE 179
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 29/52 (55%)
Query: 5 ICEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
+ +G V+L +WDTAGQE F IT YYRG +I + + DSF W
Sbjct: 51 VIDGLRVKLQIWDTAGQERFRTITSTYYRGTHGVIIVYDVTNGDSFANVRRW 102
>gi|123417386|ref|XP_001305092.1| GTP-binding protein YPTM2 [Trichomonas vaginalis G3]
gi|62869549|gb|AAX97495.1| small Rab GTPase Rab1a [Trichomonas vaginalis]
gi|72537672|gb|AAZ73762.1| small Rab GTPase [Trichomonas vaginalis]
gi|72537674|gb|AAZ73763.1| small Rab GTPase [Trichomonas vaginalis]
gi|121886589|gb|EAX92162.1| GTP-binding protein YPTM2, putative [Trichomonas vaginalis G3]
Length = 202
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/154 (35%), Positives = 83/154 (53%), Gaps = 2/154 (1%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
D F + + V K E +G+ ++L +WDTAGQE F ITK+YYRG+ V+ +
Sbjct: 32 DMFSDNYISTIGVDFKIRKIELDGKSIKLQIWDTAGQERFRTITKSYYRGSNGIVVVYDI 91
Query: 108 IDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
+RDSFE W +++N + + +LV NK DL D++ V EE + L+R G M T
Sbjct: 92 TNRDSFEQVQHWMSEIDNHASQDVCRLLVGNKADLPDRA-VKTEEGEALARQFGIPFMET 150
Query: 167 SVKEDINVNSIFRYLTTKCLSELRQQEEEYSING 200
S KE +NV ++F + T ++ S NG
Sbjct: 151 SAKESLNVENMFITMATSMKKKVGGMAASGSSNG 184
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 34/50 (68%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
+G+ ++L +WDTAGQE F ITK+YYRG+ V+ + +RDSFE W
Sbjct: 54 DGKSIKLQIWDTAGQERFRTITKSYYRGSNGIVVVYDITNRDSFEQVQHW 103
>gi|442617058|ref|NP_001259738.1| Rab35, isoform C [Drosophila melanogaster]
gi|323429945|gb|ADX64759.1| MIP14774p [Drosophila melanogaster]
gi|440216974|gb|AGB95577.1| Rab35, isoform C [Drosophila melanogaster]
Length = 190
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 88/173 (50%), Gaps = 4/173 (2%)
Query: 34 GAQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKA 93
G + +I FS D+F ++ + V K + EG V+L +WDTAGQE F IT
Sbjct: 9 GKSSLLIRFSD---DTFSGSYITTIGVDFKIRTVDIEGMRVKLQIWDTAGQERFRTITST 65
Query: 94 YYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGEIPTVLVQNKIDLLDQSVVAPEEAD 153
YYRG ++ + + +SF W +++N C + VLV NK D D+ VV E+A
Sbjct: 66 YYRGTHGVIVVYDVTNGESFANVRRWLEEIQNNCDVVKKVLVGNKNDDPDRKVVITEDAQ 125
Query: 154 LLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLS-ELRQQEEEYSINGNGLPP 205
++ + L TS K++INV ++F +T + L +LR E + L P
Sbjct: 126 RFAKQMDIELFETSAKDNINVENMFLSITRQVLDHKLRTSPNEQQKDTLHLKP 178
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 28/50 (56%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
EG V+L +WDTAGQE F IT YYRG ++ + + +SF W
Sbjct: 42 EGMRVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTNGESFANVRRW 91
>gi|240974176|ref|XP_002401800.1| zinc finger protein, putative [Ixodes scapularis]
gi|215491064|gb|EEC00705.1| zinc finger protein, putative [Ixodes scapularis]
gi|442756045|gb|JAA70182.1| Putative gtpase rab1/ypt1 small g protein superfamily [Ixodes
ricinus]
Length = 199
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 84/165 (50%), Gaps = 3/165 (1%)
Query: 34 GAQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKA 93
G + ++ F+ ++F + + V K E +GE V+L +WDTAGQE F IT
Sbjct: 20 GKSSLLLRFAD---NTFTGNYITTIGVDFKIRTLEVDGERVKLQIWDTAGQERFRTITST 76
Query: 94 YYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGEIPTVLVQNKIDLLDQSVVAPEEAD 153
YYRG V+ + + +SF W ++E C + +LV NK D + VV E+A
Sbjct: 77 YYRGTHGVVVVYDVTNGESFANVKRWLHEIEQNCDVVNRILVGNKNDDPSRKVVLTEDAQ 136
Query: 154 LLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSELRQQEEEYSI 198
+ +G +L TS KE+INV +F +T L ++Q+E +
Sbjct: 137 RFADQMGIQLFETSAKENINVEEMFNAITRMVLKSKKEQKERQQV 181
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 29/51 (56%)
Query: 6 CEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
+GE V+L +WDTAGQE F IT YYRG V+ + + +SF W
Sbjct: 52 VDGERVKLQIWDTAGQERFRTITSTYYRGTHGVVVVYDVTNGESFANVKRW 102
>gi|427787091|gb|JAA58997.1| Putative rab35 member ras oncoprotein family [Rhipicephalus
pulchellus]
Length = 200
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 84/165 (50%), Gaps = 3/165 (1%)
Query: 34 GAQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKA 93
G + ++ F+ ++F + + V K E +GE V+L +WDTAGQE F IT
Sbjct: 20 GKSSLLLRFAD---NTFTGNYITTIGVDFKIRTLEVDGERVKLQIWDTAGQERFRTITST 76
Query: 94 YYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGEIPTVLVQNKIDLLDQSVVAPEEAD 153
YYRG V+ + + +SF W ++E C + +LV NK D + VV E+A
Sbjct: 77 YYRGTHGVVVVYDVTNGESFANVKRWLHEIEQNCDVVNRILVGNKNDDPSRKVVLTEDAQ 136
Query: 154 LLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSELRQQEEEYSI 198
+ +G +L TS KE+INV +F +T L ++Q+E +
Sbjct: 137 RFADQMGIQLFETSAKENINVEEMFNAITRMVLKSKKEQKERQQV 181
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 29/51 (56%)
Query: 6 CEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
+GE V+L +WDTAGQE F IT YYRG V+ + + +SF W
Sbjct: 52 VDGERVKLQIWDTAGQERFRTITSTYYRGTHGVVVVYDVTNGESFANVKRW 102
>gi|125981885|ref|XP_001354946.1| GA21885 [Drosophila pseudoobscura pseudoobscura]
gi|54643258|gb|EAL32002.1| GA21885 [Drosophila pseudoobscura pseudoobscura]
Length = 200
Score = 100 bits (250), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 86/163 (52%), Gaps = 4/163 (2%)
Query: 34 GAQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKA 93
G + +I FS D+F ++ + V K + +G V+L +WDTAGQE F IT
Sbjct: 20 GKSSLLIRFSD---DTFSGSYITTIGVDFKIRTVDIDGLRVKLQIWDTAGQERFRTITST 76
Query: 94 YYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGEIPTVLVQNKIDLLDQSVVAPEEAD 153
YYRG +I + + DSF W +++N C + VLV NK D D VV E+A
Sbjct: 77 YYRGTHGVIIVYDVTNGDSFANVRRWLEEIQNNCDVVNKVLVGNKNDDPDCKVVITEDAQ 136
Query: 154 LLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLS-ELRQQEEE 195
++ + L TS K++INV+++F +T + L+ +LR E
Sbjct: 137 RFAKQMDIELYETSAKDNINVDNMFLSITRQVLNHKLRTTTNE 179
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 28/50 (56%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
+G V+L +WDTAGQE F IT YYRG +I + + DSF W
Sbjct: 53 DGLRVKLQIWDTAGQERFRTITSTYYRGTHGVIIVYDVTNGDSFANVRRW 102
>gi|195163365|ref|XP_002022521.1| GL12921 [Drosophila persimilis]
gi|194104513|gb|EDW26556.1| GL12921 [Drosophila persimilis]
Length = 200
Score = 100 bits (250), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 86/163 (52%), Gaps = 4/163 (2%)
Query: 34 GAQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKA 93
G + +I FS D+F ++ + V K + +G V+L +WDTAGQE F IT
Sbjct: 20 GKSSLLIRFSD---DTFSGSYITTIGVDFKIRTVDIDGLRVKLQIWDTAGQERFRTITST 76
Query: 94 YYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGEIPTVLVQNKIDLLDQSVVAPEEAD 153
YYRG +I + + DSF W +++N C + VLV NK D D VV E+A
Sbjct: 77 YYRGTHGVIIVYDVTNGDSFANVRRWLEEIQNNCDVVNKVLVGNKNDDPDCKVVITEDAQ 136
Query: 154 LLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLS-ELRQQEEE 195
++ + L TS K++INV+++F +T + L+ +LR E
Sbjct: 137 RFAKQMDIELYETSAKDNINVDNMFLSITRQVLNHKLRTTTNE 179
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 28/50 (56%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
+G V+L +WDTAGQE F IT YYRG +I + + DSF W
Sbjct: 53 DGLRVKLQIWDTAGQERFRTITSTYYRGTHGVIIVYDVTNGDSFANVRRW 102
>gi|195046772|ref|XP_001992215.1| GH24326 [Drosophila grimshawi]
gi|193893056|gb|EDV91922.1| GH24326 [Drosophila grimshawi]
Length = 201
Score = 100 bits (250), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 86/163 (52%), Gaps = 4/163 (2%)
Query: 34 GAQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKA 93
G + +I FS D+F ++ + V K +G V+L +WDTAGQE F IT
Sbjct: 20 GKSSLLIRFSD---DTFSGSYITTIGVDFKIRTVVIDGLRVKLQIWDTAGQERFRTITST 76
Query: 94 YYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGEIPTVLVQNKIDLLDQSVVAPEEAD 153
YYRG +I + + DSF +W ++++ C + VLV NK D D+ VV E+A
Sbjct: 77 YYRGTHGVIIVYDVTNGDSFANVRTWLEEIKHNCDVVNKVLVGNKNDDPDRKVVITEDAQ 136
Query: 154 LLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLS-ELRQQEEE 195
+R + L TS K++INV +F +T + L+ +LR +E
Sbjct: 137 RYARQMDIELFETSAKDNINVEDMFMSITRQVLNYKLRAASDE 179
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 30/52 (57%)
Query: 5 ICEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
+ +G V+L +WDTAGQE F IT YYRG +I + + DSF +W
Sbjct: 51 VIDGLRVKLQIWDTAGQERFRTITSTYYRGTHGVIIVYDVTNGDSFANVRTW 102
>gi|145515201|ref|XP_001443500.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834479|emb|CAI44558.1| rab_A52 [Paramecium tetraurelia]
gi|124410889|emb|CAK76103.1| unnamed protein product [Paramecium tetraurelia]
Length = 208
Score = 100 bits (248), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 83/155 (53%), Gaps = 5/155 (3%)
Query: 50 FEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTID 109
F H + V K + +G++++L +WDTAGQE F ITK YY+GAQ ++T+S ID
Sbjct: 38 FSITHMATLGVDFKIKTIDVDGKKLKLQIWDTAGQERFRNITKTYYKGAQGVILTYSVID 97
Query: 110 RDSFEAAHSWKMKVE--NECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTS 167
R SF+ W ++ ++ VLV NK D+ + V EE +S+ TS
Sbjct: 98 RQSFQNVDGWLRSIQENTNSSDVQLVLVGNKADMSAERQVTLEEGKKMSQQYNIPFFETS 157
Query: 168 VKEDINVNSIFRYLT---TKCLSELRQQEEEYSIN 199
K ++N+N F L + LS+++ EE+ ++N
Sbjct: 158 AKSNMNINEAFNNLAFRIIQTLSKMQTNEEKQNLN 192
Score = 69.3 bits (168), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 48/74 (64%), Gaps = 7/74 (9%)
Query: 6 CEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVSIKRT 65
+G++++L +WDTAGQE F ITK YY+GAQ ++T+S IDR SF+ W R+
Sbjct: 57 VDGKKLKLQIWDTAGQERFRNITKTYYKGAQGVILTYSVIDRQSFQNVDGW------LRS 110
Query: 66 IKE-CEGEEVRLML 78
I+E +V+L+L
Sbjct: 111 IQENTNSSDVQLVL 124
>gi|170058469|ref|XP_001864935.1| ras-related protein Rab [Culex quinquefasciatus]
gi|167877567|gb|EDS40950.1| ras-related protein Rab [Culex quinquefasciatus]
Length = 203
Score = 100 bits (248), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 88/169 (52%), Gaps = 3/169 (1%)
Query: 34 GAQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKA 93
G + +I FS ++F ++ + V K GE V+L +WDTAGQE F IT
Sbjct: 20 GKSSLLIRFSD---NTFSGSYITTIGVDFKIRTVVINGERVKLQIWDTAGQERFRTITNT 76
Query: 94 YYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGEIPTVLVQNKIDLLDQSVVAPEEAD 153
YYRG ++ + + +SF W ++E+ C + VLV NK D ++ VV E++D
Sbjct: 77 YYRGTHGVIVVYDVTNGESFANVKRWLQEIESNCDVVNKVLVGNKNDDPNRKVVITEDSD 136
Query: 154 LLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSELRQQEEEYSINGNG 202
++ + +L TS K+++NV +F +T + L +Q +++ + N
Sbjct: 137 RFAKQMDIQLFETSAKDNLNVEEMFLAITEQVLRHKKQTQKQVQTDQNN 185
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 29/52 (55%)
Query: 5 ICEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
+ GE V+L +WDTAGQE F IT YYRG ++ + + +SF W
Sbjct: 51 VINGERVKLQIWDTAGQERFRTITNTYYRGTHGVIVVYDVTNGESFANVKRW 102
>gi|221116505|ref|XP_002158899.1| PREDICTED: ras-related protein Rab-35-like [Hydra magnipapillata]
Length = 203
Score = 100 bits (248), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 77/148 (52%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
D F ++ + V K +GE+V+L +WDTAGQE F IT YYRG ++ +
Sbjct: 31 DMFSGSYITTIGVDFKIRTINIDGEKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDV 90
Query: 108 IDRDSFEAAHSWKMKVENECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTS 167
+ +SF W +++ C + VLV NK D L VV ++A + +G + TS
Sbjct: 91 TNAESFVNVKRWLHEIDQNCDVVNKVLVGNKNDCLKNKVVDTQDAKTFAAQMGVEVFETS 150
Query: 168 VKEDINVNSIFRYLTTKCLSELRQQEEE 195
K+++N+ +F ++T L R+Q+ +
Sbjct: 151 AKDNLNIEQVFSHITAMVLRSKREQQSK 178
>gi|289741455|gb|ADD19475.1| GTP-binding protein H-ray [Glossina morsitans morsitans]
Length = 200
Score = 99.8 bits (247), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 84/163 (51%), Gaps = 4/163 (2%)
Query: 34 GAQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKA 93
G + +I FS D+F ++ + V K +G V+L +WDTAGQE F IT
Sbjct: 20 GKSSLLIRFSD---DTFSGSYITTIGVDFKIRTVVIDGMRVKLQIWDTAGQERFRTITST 76
Query: 94 YYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGEIPTVLVQNKIDLLDQSVVAPEEAD 153
YYRG +I + + +SF W +++N C + VLV NK D D+ VV E+A
Sbjct: 77 YYRGTHGVIIVYDVTNGESFANVRRWLDEIQNNCDVVNKVLVGNKNDDPDRKVVITEDAQ 136
Query: 154 LLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLS-ELRQQEEE 195
+R + L TS K+++NV +F +T + L +LR + E
Sbjct: 137 RFARQMDIELFETSAKDNVNVEEMFLSITRQVLQHKLRNAQNE 179
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 29/52 (55%)
Query: 5 ICEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
+ +G V+L +WDTAGQE F IT YYRG +I + + +SF W
Sbjct: 51 VIDGMRVKLQIWDTAGQERFRTITSTYYRGTHGVIIVYDVTNGESFANVRRW 102
>gi|194897947|ref|XP_001978753.1| GG17497 [Drosophila erecta]
gi|190650402|gb|EDV47680.1| GG17497 [Drosophila erecta]
Length = 222
Score = 99.8 bits (247), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 58/168 (34%), Positives = 89/168 (52%), Gaps = 5/168 (2%)
Query: 35 AQACVITFSTIDR---DSFEAAHSWKMKVS-IKRTIKECEGEEVRLMLWDTAGQEEFDAI 90
+ CV S + R D F A H ++ S + R + +G +L +WDTAGQE F A+
Sbjct: 20 GEGCVGKTSLVLRYMEDRFNAQHLTTLQASFVTRKVSLEDGRRAQLNIWDTAGQERFHAL 79
Query: 91 TKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENECG-EIPTVLVQNKIDLLDQSVVAP 149
YYRG+ ++ + DRDSF+ SW ++ G EI ++V NK DL +Q V
Sbjct: 80 GPIYYRGSDGALLVYDITDRDSFQKVKSWVRELRQMRGTEIALIIVGNKTDLEEQRAVTH 139
Query: 150 EEADLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSELRQQEEEYS 197
+EA +R +G + + TS KE+ V +F LT L +L Q++ + S
Sbjct: 140 DEALQYARTVGAQYVETSAKENEGVAELFELLTHLMLEQLSQRQPDAS 187
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 41/72 (56%), Gaps = 6/72 (8%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVSIKRTI 66
+G +L +WDTAGQE F A+ YYRG+ ++ + DRDSF+ SW R +
Sbjct: 59 DGRRAQLNIWDTAGQERFHALGPIYYRGSDGALLVYDITDRDSFQKVKSW------VREL 112
Query: 67 KECEGEEVRLML 78
++ G E+ L++
Sbjct: 113 RQMRGTEIALII 124
>gi|193652503|ref|XP_001951946.1| PREDICTED: ras-related protein Rab-35-like [Acyrthosiphon pisum]
Length = 202
Score = 99.4 bits (246), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 87/168 (51%), Gaps = 3/168 (1%)
Query: 34 GAQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKA 93
G + ++ F+ ++F ++ + V K +GE+V+L +WDTAGQE F IT
Sbjct: 20 GKSSLLVRFAD---NTFSGSYITTIGVDFKIRTVIVDGEKVKLQIWDTAGQERFRTITST 76
Query: 94 YYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGEIPTVLVQNKIDLLDQSVVAPEEAD 153
YYRG ++ + + DSF W +++ C + +LV NK D D+ VV E+A
Sbjct: 77 YYRGTHGVIVVYDVSNGDSFANVKRWLHEIDQNCEVVNRILVGNKNDAPDRKVVLTEDAQ 136
Query: 154 LLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSELRQQEEEYSINGN 201
+ +G +L TS K++INV +F +T + L ++ +E + N
Sbjct: 137 RFADQMGIQLYETSAKDNINVEQMFMSITKQVLRNKKETKERQAHQNN 184
Score = 59.7 bits (143), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 31/52 (59%)
Query: 5 ICEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
I +GE+V+L +WDTAGQE F IT YYRG ++ + + DSF W
Sbjct: 51 IVDGEKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVSNGDSFANVKRW 102
>gi|21429138|gb|AAM50288.1| RE42508p [Drosophila melanogaster]
gi|220948536|gb|ACL86811.1| Rab21-PA [synthetic construct]
gi|220957812|gb|ACL91449.1| Rab21-PA [synthetic construct]
Length = 222
Score = 99.4 bits (246), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 58/168 (34%), Positives = 89/168 (52%), Gaps = 5/168 (2%)
Query: 35 AQACVITFSTIDR---DSFEAAHSWKMKVS-IKRTIKECEGEEVRLMLWDTAGQEEFDAI 90
+ CV S + R D F A H ++ S + R + +G +L +WDTAGQE F A+
Sbjct: 20 GEGCVGKTSLVLRYMEDRFNAQHLSTLQASFVSRKMSLEDGRRAQLNIWDTAGQERFHAL 79
Query: 91 TKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENECG-EIPTVLVQNKIDLLDQSVVAP 149
YYRG+ ++ + DRDSF+ SW ++ G EI ++V NK DL +Q V
Sbjct: 80 GPIYYRGSDGALLVYDITDRDSFQKVKSWVRELRQMRGTEIALIIVGNKTDLEEQRAVTH 139
Query: 150 EEADLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSELRQQEEEYS 197
+EA +R +G + + TS KE+ V +F LT L +L Q++ + S
Sbjct: 140 DEALQYARTVGAQYVETSAKENEGVAELFELLTQLMLEQLSQRQPDAS 187
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 41/72 (56%), Gaps = 6/72 (8%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVSIKRTI 66
+G +L +WDTAGQE F A+ YYRG+ ++ + DRDSF+ SW R +
Sbjct: 59 DGRRAQLNIWDTAGQERFHALGPIYYRGSDGALLVYDITDRDSFQKVKSW------VREL 112
Query: 67 KECEGEEVRLML 78
++ G E+ L++
Sbjct: 113 RQMRGTEIALII 124
>gi|221500833|ref|NP_001036321.2| Rab21, isoform C [Drosophila melanogaster]
gi|442617211|ref|NP_001259785.1| Rab21, isoform D [Drosophila melanogaster]
gi|220901851|gb|EAA46055.3| Rab21, isoform C [Drosophila melanogaster]
gi|440217029|gb|AGB95623.1| Rab21, isoform D [Drosophila melanogaster]
Length = 222
Score = 99.4 bits (246), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 58/168 (34%), Positives = 89/168 (52%), Gaps = 5/168 (2%)
Query: 35 AQACVITFSTIDR---DSFEAAHSWKMKVS-IKRTIKECEGEEVRLMLWDTAGQEEFDAI 90
+ CV S + R D F A H ++ S + R + +G +L +WDTAGQE F A+
Sbjct: 20 GEGCVGKTSLVLRYMEDRFNAQHLSTLQASFVSRKMSLEDGRRAQLNIWDTAGQERFHAL 79
Query: 91 TKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENECG-EIPTVLVQNKIDLLDQSVVAP 149
YYRG+ ++ + DRDSF+ SW ++ G EI ++V NK DL +Q V
Sbjct: 80 GPIYYRGSDGALLVYDITDRDSFQKVKSWVRELRQMRGTEIALIIVGNKTDLEEQRAVTH 139
Query: 150 EEADLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSELRQQEEEYS 197
+EA +R +G + + TS KE+ V +F LT L +L Q++ + S
Sbjct: 140 DEALQYARTVGAQYVETSAKENEGVAELFELLTQLMLEQLSQRQPDAS 187
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 41/72 (56%), Gaps = 6/72 (8%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVSIKRTI 66
+G +L +WDTAGQE F A+ YYRG+ ++ + DRDSF+ SW R +
Sbjct: 59 DGRRAQLNIWDTAGQERFHALGPIYYRGSDGALLVYDITDRDSFQKVKSW------VREL 112
Query: 67 KECEGEEVRLML 78
++ G E+ L++
Sbjct: 113 RQMRGTEIALII 124
>gi|326510941|dbj|BAJ91818.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326531646|dbj|BAJ97827.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 204
Score = 99.4 bits (246), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 50/130 (38%), Positives = 77/130 (59%), Gaps = 2/130 (1%)
Query: 64 RTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 123
RT+ E +G+ V+L +WDTAGQE F IT +YYRGA +I + DR+SF W ++
Sbjct: 49 RTV-ELDGKSVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDRESFNNVKQWLSEI 107
Query: 124 ENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLT 182
+ + + +LV NK DL+D VV EEA + +LG + TS KE INV + F ++
Sbjct: 108 DRYASDSVCKLLVGNKCDLVDSKVVDTEEAKAFAESLGMNFLETSAKESINVETAFLTMS 167
Query: 183 TKCLSELRQQ 192
++ +++ Q
Sbjct: 168 SEIKNKMASQ 177
>gi|325179736|emb|CCA14139.1| Rab8 family GTPase putative [Albugo laibachii Nc14]
Length = 219
Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 87/164 (53%), Gaps = 6/164 (3%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
DSF + + K E +G++++L +WDTAGQE F IT +Y+RGAQ ++ +
Sbjct: 51 DSFSPTFITTIGIDFKIKNIELDGKKIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDV 110
Query: 108 IDRDSFEAAHSWKMKVENECG-EIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
DR SF++ +W +++ + +L+ NK D++D V++ EE L+ G R T
Sbjct: 111 TDRASFQSIRNWVGQIQQHADVHVNKILIGNKCDMMDDKVISTEEGQALADEYGVRFYET 170
Query: 167 SVKEDINVNSIF----RYLTTKCLSE-LRQQEEEYSINGNGLPP 205
S K +INV F R + + + E ++E +++ +PP
Sbjct: 171 SAKNNINVEGGFIDIAREVKNRLMEEGGSHKKESINLSAKAIPP 214
>gi|223634478|gb|ACN09816.1| GH27649p [Drosophila melanogaster]
Length = 263
Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/168 (34%), Positives = 89/168 (52%), Gaps = 5/168 (2%)
Query: 35 AQACVITFSTIDR---DSFEAAHSWKMKVS-IKRTIKECEGEEVRLMLWDTAGQEEFDAI 90
+ CV S + R D F A H ++ S + R + +G +L +WDTAGQE F A+
Sbjct: 61 GEGCVGKTSLVLRYMEDRFNAQHLSTLQASFVSRKMSLEDGRRAQLNIWDTAGQERFHAL 120
Query: 91 TKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENECG-EIPTVLVQNKIDLLDQSVVAP 149
YYRG+ ++ + DRDSF+ SW ++ G EI ++V NK DL +Q V
Sbjct: 121 GPIYYRGSDGALLVYDITDRDSFQKVKSWVRELRQMRGTEIALIIVGNKTDLEEQRAVTH 180
Query: 150 EEADLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSELRQQEEEYS 197
+EA +R +G + + TS KE+ V +F LT L +L Q++ + S
Sbjct: 181 DEALQYARTVGAQYVETSAKENEGVAELFELLTQLMLEQLSQRQPDAS 228
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 41/72 (56%), Gaps = 6/72 (8%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVSIKRTI 66
+G +L +WDTAGQE F A+ YYRG+ ++ + DRDSF+ SW R +
Sbjct: 100 DGRRAQLNIWDTAGQERFHALGPIYYRGSDGALLVYDITDRDSFQKVKSW------VREL 153
Query: 67 KECEGEEVRLML 78
++ G E+ L++
Sbjct: 154 RQMRGTEIALII 165
>gi|194762836|ref|XP_001963540.1| GF20451 [Drosophila ananassae]
gi|190629199|gb|EDV44616.1| GF20451 [Drosophila ananassae]
Length = 200
Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 84/163 (51%), Gaps = 4/163 (2%)
Query: 34 GAQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKA 93
G + +I FS D+F ++ + V K + G V+L +WDTAGQE F IT
Sbjct: 20 GKSSLLIRFSD---DTFSGSYITTIGVDFKIRTVDIGGLRVKLQIWDTAGQERFRTITST 76
Query: 94 YYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGEIPTVLVQNKIDLLDQSVVAPEEAD 153
YYRG ++ + + +SF W +++N C + VLV NK D D+ VV E+A
Sbjct: 77 YYRGTHGVIVVYDVTNGESFANVRRWLEEIQNNCDVVNKVLVGNKNDDPDRKVVITEDAQ 136
Query: 154 LLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLS-ELRQQEEE 195
++ + L TS K++INV+ +F +T + L +LR E
Sbjct: 137 RFAKQMDIELFETSAKDNINVDEMFLSITRQVLQHKLRTTSNE 179
Score = 52.8 bits (125), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 27/49 (55%)
Query: 8 GEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
G V+L +WDTAGQE F IT YYRG ++ + + +SF W
Sbjct: 54 GLRVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTNGESFANVRRW 102
>gi|61365868|gb|AAX42776.1| RAB13 member RAS oncogene family [synthetic construct]
Length = 204
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/175 (34%), Positives = 87/175 (49%), Gaps = 8/175 (4%)
Query: 34 GAQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKA 93
G +I F+ D+F + + + K + EG++++L +WDTAGQE F IT A
Sbjct: 20 GKTCLIIRFA---EDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQERFKTITTA 76
Query: 94 YYRGAQACVITFSTIDRDSFEAAHSWKMKV-ENECGEIPTVLVQNKIDLLDQSVVAPEEA 152
YYRGA ++ + D SFE +W + EN + +L+ NK D+ + V E+A
Sbjct: 77 YYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCDMEAKRKVQKEQA 136
Query: 153 DLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSELRQQEEEYSINGNGLPPYT 207
D L+R G R TS K +NV+ F L L + Q S NGN PP T
Sbjct: 137 DKLAREHGIRFFETSAKSSMNVDEAFSSLARDILLKSGGQR---SGNGNK-PPST 187
>gi|444705937|gb|ELW47313.1| Nuclear pore membrane glycoprotein 210-like protein [Tupaia
chinensis]
Length = 2031
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 103/215 (47%), Gaps = 17/215 (7%)
Query: 1 MINRICEGEEVRLMLWDTAG-QEEFDAITKAYYRGAQACVITFSTIDR---------DSF 50
+NR+ + V ++ T G + A+ KAY + +I S + + D+F
Sbjct: 1805 FLNRV---QTVPVVYVPTIGTPQPVSAMAKAYDHLFKLLLIGDSGVGKTCLIIRFAEDNF 1861
Query: 51 EAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDR 110
+ + + + K + EG++++L +WDTAGQE F IT AYYRGA ++ + D
Sbjct: 1862 NSTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDE 1921
Query: 111 DSFEAAHSWKMKV-ENECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVK 169
SFE +W + EN + +L+ NK D+ + V E+AD L+R G R TS K
Sbjct: 1922 KSFENIQNWMKSIKENASAGVERLLLGNKCDMEAKRKVQKEQADKLAREHGIRFFETSAK 1981
Query: 170 EDINVNSIFRYLTTKCLSELRQQEEEYSINGNGLP 204
+NV+ F L L + S NGN LP
Sbjct: 1982 SSMNVDEAFNSLARDI---LLKSGGRRSGNGNKLP 2013
>gi|223997470|ref|XP_002288408.1| rab-type small G protein [Thalassiosira pseudonana CCMP1335]
gi|223998436|ref|XP_002288891.1| rab-type small GTPase [Thalassiosira pseudonana CCMP1335]
gi|220975516|gb|EED93844.1| rab-type small G protein [Thalassiosira pseudonana CCMP1335]
gi|220975999|gb|EED94327.1| rab-type small GTPase [Thalassiosira pseudonana CCMP1335]
Length = 181
Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/132 (36%), Positives = 72/132 (54%), Gaps = 1/132 (0%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
DSF + + K E +G+ ++L +WDTAGQE F IT +Y+RGAQ ++ +
Sbjct: 33 DSFSPTFITTIGIDFKIKNVEVDGKRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDV 92
Query: 108 IDRDSFEAAHSWKMKVENECG-EIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
DR SFE+ +W +++ + +LV NK D+LD+ VV+ EE L++ G
Sbjct: 93 TDRRSFESIRNWISQIQQHADVHVNKILVGNKCDMLDEKVVSTEEGQKLAKEFGVDFFEC 152
Query: 167 SVKEDINVNSIF 178
S K DINV F
Sbjct: 153 SAKNDINVEQSF 164
>gi|195482441|ref|XP_002102048.1| GE15254 [Drosophila yakuba]
gi|194189572|gb|EDX03156.1| GE15254 [Drosophila yakuba]
Length = 222
Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/168 (34%), Positives = 89/168 (52%), Gaps = 5/168 (2%)
Query: 35 AQACVITFSTIDR---DSFEAAHSWKMKVS-IKRTIKECEGEEVRLMLWDTAGQEEFDAI 90
+ CV S + R D F A H ++ S + R + +G +L +WDTAGQE F A+
Sbjct: 20 GEGCVGKTSLVLRYMEDRFNAQHLSTLQASFVTRKLSLEDGRRAQLNIWDTAGQERFHAL 79
Query: 91 TKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENECG-EIPTVLVQNKIDLLDQSVVAP 149
YYRG+ ++ + DRDSF+ SW ++ G EI ++V NK DL +Q V
Sbjct: 80 GPIYYRGSDGALLVYDITDRDSFQKVKSWVRELRQMRGTEIALIIVGNKTDLEEQRSVTH 139
Query: 150 EEADLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSELRQQEEEYS 197
+EA +R +G + + TS KE+ V +F LT L +L Q++ + S
Sbjct: 140 DEALPYARTVGAQYVETSAKENEGVAELFDLLTHLMLEQLSQRQPDAS 187
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 41/72 (56%), Gaps = 6/72 (8%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVSIKRTI 66
+G +L +WDTAGQE F A+ YYRG+ ++ + DRDSF+ SW R +
Sbjct: 59 DGRRAQLNIWDTAGQERFHALGPIYYRGSDGALLVYDITDRDSFQKVKSW------VREL 112
Query: 67 KECEGEEVRLML 78
++ G E+ L++
Sbjct: 113 RQMRGTEIALII 124
>gi|321470661|gb|EFX81636.1| hypothetical protein DAPPUDRAFT_195992 [Daphnia pulex]
Length = 201
Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 87/165 (52%), Gaps = 5/165 (3%)
Query: 34 GAQACVITFSTIDRDSFEAAHSWKMKVSIK-RTIKECEGEEVRLMLWDTAGQEEFDAITK 92
G + ++ F+ ++F + + V K RTI GE V+L +WDTAGQE F IT
Sbjct: 20 GKSSLLLRFAD---NTFSGNYITTIGVDFKIRTIL-LNGERVKLQIWDTAGQERFRTITS 75
Query: 93 AYYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGEIPTVLVQNKIDLLDQSVVAPEEA 152
YYRG ++ + +SF W ++E C + +LV NK D+ D+ VV E+A
Sbjct: 76 TYYRGTHGVIVVYDVSSGESFANVKRWLHEIEQNCDVVNRILVGNKDDMPDRKVVLTEDA 135
Query: 153 DLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSELRQQEEEYS 197
+ +G +L TS K++ NV +F +T + L ++Q+E+ S
Sbjct: 136 QRFASQMGIQLFETSAKDNKNVEEMFNAITQQVLLTKKEQKEQAS 180
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 28/52 (53%)
Query: 5 ICEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
+ GE V+L +WDTAGQE F IT YYRG ++ + +SF W
Sbjct: 51 LLNGERVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVSSGESFANVKRW 102
>gi|357631591|gb|EHJ79060.1| putative ras-related protein Rab [Danaus plexippus]
Length = 201
Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 87/183 (47%), Gaps = 6/183 (3%)
Query: 23 EFDAITKAYYRG----AQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLML 78
EFD + K G ++C++ ++F ++ + V K E GE V+L +
Sbjct: 4 EFDHLFKLLIIGDSGVGKSCLLL--RFADNTFSGSYITTIGVDFKIRTLEINGERVKLQI 61
Query: 79 WDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGEIPTVLVQNK 138
WDTAGQE F IT YYRG ++ + + +SF W ++E C + VLV NK
Sbjct: 62 WDTAGQERFRTITSTYYRGTHGVIVVYDVTNGESFANVKRWLHEIEQNCDVVNKVLVGNK 121
Query: 139 IDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSELRQQEEEYSI 198
D + VV E+A + + L TS KE+INV +F +T L + +E ++
Sbjct: 122 NDCPSRKVVVTEDAQRFANQMNIPLFETSAKENINVEEMFLTITKMVLRSKLEMKERQNV 181
Query: 199 NGN 201
N
Sbjct: 182 TAN 184
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 28/49 (57%)
Query: 8 GEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
GE V+L +WDTAGQE F IT YYRG ++ + + +SF W
Sbjct: 54 GERVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTNGESFANVKRW 102
>gi|167391072|ref|XP_001739628.1| hypothetical protein [Entamoeba dispar SAW760]
gi|165896634|gb|EDR23985.1| hypothetical protein, conserved [Entamoeba dispar SAW760]
Length = 206
Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 78/144 (54%), Gaps = 1/144 (0%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
D++ H + V K + +G+ V+L +WDTAGQE F IT +YYRGAQ ++ +S
Sbjct: 31 DTYTDTHIATIGVDFKIKTVQIDGKNVKLQIWDTAGQERFRTITSSYYRGAQGIIVVYSV 90
Query: 108 IDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
ID +F+ W ++E E + +L+ NK DL D+ V E+ L+ +L M
Sbjct: 91 IDLQTFQNVRQWLQEIERYASETVIKLLIGNKCDLEDERAVTVEQGQELANSLNVSFMEA 150
Query: 167 SVKEDINVNSIFRYLTTKCLSELR 190
S K+ +NV+ +F + T + ++
Sbjct: 151 SAKKSLNVDELFNKIATDIMKNIQ 174
>gi|116007254|ref|NP_001036322.1| Rab21, isoform A [Drosophila melanogaster]
gi|30923579|gb|EAA46056.1| Rab21, isoform A [Drosophila melanogaster]
Length = 189
Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/152 (35%), Positives = 83/152 (54%), Gaps = 2/152 (1%)
Query: 48 DSFEAAHSWKMKVS-IKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFS 106
D F A H ++ S + R + +G +L +WDTAGQE F A+ YYRG+ ++ +
Sbjct: 3 DRFNAQHLSTLQASFVSRKMSLEDGRRAQLNIWDTAGQERFHALGPIYYRGSDGALLVYD 62
Query: 107 TIDRDSFEAAHSWKMKVENECG-EIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMR 165
DRDSF+ SW ++ G EI ++V NK DL +Q V +EA +R +G + +
Sbjct: 63 ITDRDSFQKVKSWVRELRQMRGTEIALIIVGNKTDLEEQRAVTHDEALQYARTVGAQYVE 122
Query: 166 TSVKEDINVNSIFRYLTTKCLSELRQQEEEYS 197
TS KE+ V +F LT L +L Q++ + S
Sbjct: 123 TSAKENEGVAELFELLTQLMLEQLSQRQPDAS 154
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 41/72 (56%), Gaps = 6/72 (8%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVSIKRTI 66
+G +L +WDTAGQE F A+ YYRG+ ++ + DRDSF+ SW R +
Sbjct: 26 DGRRAQLNIWDTAGQERFHALGPIYYRGSDGALLVYDITDRDSFQKVKSW------VREL 79
Query: 67 KECEGEEVRLML 78
++ G E+ L++
Sbjct: 80 RQMRGTEIALII 91
>gi|260803593|ref|XP_002596674.1| hypothetical protein BRAFLDRAFT_122037 [Branchiostoma floridae]
gi|229281933|gb|EEN52686.1| hypothetical protein BRAFLDRAFT_122037 [Branchiostoma floridae]
Length = 207
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 79/154 (51%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
++F + + V K E GE+V+L +WDTAGQE F IT YYRG ++ +
Sbjct: 31 NTFSGTYITTIGVDFKIRTTEMNGEKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDV 90
Query: 108 IDRDSFEAAHSWKMKVENECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTS 167
DSF W +++ C + +LV NK D ++ VV +A + +G +L TS
Sbjct: 91 TSADSFVNVKRWLHEIDQNCDVVNRILVGNKNDCPERKVVETGDAQRFADQMGIKLFETS 150
Query: 168 VKEDINVNSIFRYLTTKCLSELRQQEEEYSINGN 201
KE+INV +F +T + L + ++ + + + N
Sbjct: 151 AKENINVEEMFNEITRQVLHQKKETQAKLAAQTN 184
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 28/49 (57%)
Query: 8 GEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
GE+V+L +WDTAGQE F IT YYRG ++ + DSF W
Sbjct: 54 GEKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSADSFVNVKRW 102
>gi|397605930|gb|EJK59155.1| hypothetical protein THAOC_20656 [Thalassiosira oceanica]
Length = 206
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/132 (36%), Positives = 72/132 (54%), Gaps = 1/132 (0%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
DSF + + K E +G+ ++L +WDTAGQE F IT +Y+RGAQ ++ +
Sbjct: 34 DSFSPTFITTIGIDFKIKNVEVDGKRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDV 93
Query: 108 IDRDSFEAAHSWKMKVENECG-EIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
DR SFE+ +W +++ + +LV NK D+LD+ VV+ EE L++ G
Sbjct: 94 TDRRSFESIRNWISQIQQHADVHVNKILVGNKCDMLDEKVVSTEEGQKLAKEFGVDFYEC 153
Query: 167 SVKEDINVNSIF 178
S K DINV F
Sbjct: 154 SAKNDINVEPTF 165
>gi|126697446|gb|ABO26680.1| RAB protein [Haliotis discus discus]
Length = 200
Score = 97.8 bits (242), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 85/162 (52%), Gaps = 3/162 (1%)
Query: 34 GAQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKA 93
G + ++ F+ ++F + + V K + GE+V+L +WDTAGQE F IT
Sbjct: 20 GKSSLLLRFAA---NTFSGTYITTIGVDFKIRTVDVNGEKVKLQIWDTAGQERFRTITST 76
Query: 94 YYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGEIPTVLVQNKIDLLDQSVVAPEEAD 153
YYRG ++ + +SF W +++ C + +LV NK D D+ VV ++A
Sbjct: 77 YYRGTHGVIVVYDVSSGESFANVKRWLHEIDQNCDVVNRILVGNKDDDPDRKVVLTQDAQ 136
Query: 154 LLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSELRQQEEE 195
+ +G +L TS KE+INV +F +T LS ++Q+++
Sbjct: 137 RFADQMGIQLYETSAKENINVEEMFLAITRLVLSTKKEQQKK 178
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 28/51 (54%)
Query: 6 CEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
GE+V+L +WDTAGQE F IT YYRG ++ + +SF W
Sbjct: 52 VNGEKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVSSGESFANVKRW 102
>gi|323451357|gb|EGB07234.1| hypothetical protein AURANDRAFT_69836 [Aureococcus anophagefferens]
Length = 198
Score = 97.8 bits (242), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 79/143 (55%), Gaps = 1/143 (0%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
D+F + + + K +G+ V+L +WDTAGQE+F IT++Y+RGAQ V+ +
Sbjct: 33 DTFSSTFITTIGIDFKIKTINLDGKRVKLQIWDTAGQEQFRTITRSYFRGAQGIVLVYDI 92
Query: 108 IDRDSFEAAHSWKMKV-ENECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
DR +F + SW ++ E+ G++ +LV NK D V+ +E L+ G R + T
Sbjct: 93 TDRGTFNSVRSWMAQINEHADGQVNKILVGNKCDNSSARKVSADEGRKLADEYGVRFIET 152
Query: 167 SVKEDINVNSIFRYLTTKCLSEL 189
S K+++NV FR + + S +
Sbjct: 153 SAKQNVNVTEAFRAIAQQVTSRI 175
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 39/55 (70%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVS 61
+G+ V+L +WDTAGQE+F IT++Y+RGAQ V+ + DR +F + SW +++
Sbjct: 55 DGKRVKLQIWDTAGQEQFRTITRSYFRGAQGIVLVYDITDRGTFNSVRSWMAQIN 109
>gi|428169029|gb|EKX37967.1| hypothetical protein GUITHDRAFT_89513 [Guillardia theta CCMP2712]
Length = 209
Score = 97.8 bits (242), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 92/183 (50%), Gaps = 11/183 (6%)
Query: 18 TAGQEEFDAITKAYYRG----AQACVIT-FSTIDRDSFEAAHSWKMKVSIK-RTIKECEG 71
+ G +D + K G ++C++ FS DSF + + + K RTI E EG
Sbjct: 5 SGGTGNYDYLVKLLLIGDSGVGKSCLLLRFSD---DSFTTSFITTIGIDFKIRTI-EQEG 60
Query: 72 EEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGE-I 130
+ ++L +WDTAGQE F IT AYYRGA ++ + D SF +W +++ + +
Sbjct: 61 KRLKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDEQSFNNIRNWMRQIQQHASDNV 120
Query: 131 PTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSELR 190
+L+ NK D+LD+ V+ L+ G + TS K +INV F + + LR
Sbjct: 121 NKILIGNKCDMLDKKVIETARGQALADEFGIKFFETSAKNNINVEKAFTEIARDVMVRLR 180
Query: 191 QQE 193
+QE
Sbjct: 181 EQE 183
>gi|194768593|ref|XP_001966396.1| GF22152 [Drosophila ananassae]
gi|190617160|gb|EDV32684.1| GF22152 [Drosophila ananassae]
Length = 225
Score = 97.4 bits (241), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 90/168 (53%), Gaps = 5/168 (2%)
Query: 35 AQACVITFSTIDR---DSFEAAHSWKMKVS-IKRTIKECEGEEVRLMLWDTAGQEEFDAI 90
+ CV S + R D F + H ++ S + R + +G + +L +WDTAGQE F A+
Sbjct: 21 GEGCVGKTSLVLRYMEDRFNSQHLSTLQASFVTRKVNLEDGRKAQLNIWDTAGQERFHAL 80
Query: 91 TKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENECG-EIPTVLVQNKIDLLDQSVVAP 149
YYRG+ ++ + D+DSF+ SW ++ G +I ++V NK DL +Q V
Sbjct: 81 GPIYYRGSDGALLVYDITDQDSFQKVKSWVRELRQMRGTDIALIIVGNKTDLEEQRAVMH 140
Query: 150 EEADLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSELRQQEEEYS 197
+EA +R +G + + TS KE+ V +F LT L +L Q+E + S
Sbjct: 141 QEAMQYARTVGAQYVETSAKENEGVTELFELLTQLMLEQLSQREPDSS 188
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 6/72 (8%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVSIKRTI 66
+G + +L +WDTAGQE F A+ YYRG+ ++ + D+DSF+ SW R +
Sbjct: 60 DGRKAQLNIWDTAGQERFHALGPIYYRGSDGALLVYDITDQDSFQKVKSW------VREL 113
Query: 67 KECEGEEVRLML 78
++ G ++ L++
Sbjct: 114 RQMRGTDIALII 125
>gi|91084289|ref|XP_967046.1| PREDICTED: similar to ras-related protein Rab, putative [Tribolium
castaneum]
gi|270008813|gb|EFA05261.1| hypothetical protein TcasGA2_TC015416 [Tribolium castaneum]
Length = 201
Score = 97.4 bits (241), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 86/168 (51%), Gaps = 3/168 (1%)
Query: 34 GAQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKA 93
G + ++ F+ ++F ++ + V K +G++V+L +WDTAGQE F IT
Sbjct: 20 GKSSLLLRFAD---NTFSGSYITTIGVDFKIKTVSLDGQKVKLQIWDTAGQERFRTITST 76
Query: 94 YYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGEIPTVLVQNKIDLLDQSVVAPEEAD 153
YYRG ++ + + +SF W ++E C + VLV NK D D+ VV E+A
Sbjct: 77 YYRGTHGVIVVYDVTNGESFANVKRWLHEIEQNCDVVNRVLVGNKNDTPDRKVVLTEDAQ 136
Query: 154 LLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSELRQQEEEYSINGN 201
+ + +L TS K+++NV +F +T L ++ +E +I N
Sbjct: 137 RFADTMNIQLFETSAKDNVNVEEMFMAITRLVLRSKQEMKERQNITQN 184
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 30/50 (60%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
+G++V+L +WDTAGQE F IT YYRG ++ + + +SF W
Sbjct: 53 DGQKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTNGESFANVKRW 102
>gi|255076991|ref|XP_002502151.1| ras-related gtp-binding protein [Micromonas sp. RCC299]
gi|226517416|gb|ACO63409.1| ras-related gtp-binding protein [Micromonas sp. RCC299]
Length = 202
Score = 97.4 bits (241), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 84/165 (50%), Gaps = 7/165 (4%)
Query: 19 AGQEEFDAITKAYYRG----AQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEV 74
AG +++D + K G ++C++ D F ++ + + K E +G+ V
Sbjct: 3 AGSQQYDHLIKLLLIGDSGVGKSCLLL--RFSEDQFTSSFITTIGIDFKIRTVELDGKRV 60
Query: 75 RLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGE-IPTV 133
+L +WDTAGQE F IT AYYRGA ++T+ D SF +W +E + + V
Sbjct: 61 KLQIWDTAGQERFRTITNAYYRGAHGILLTYDVTDEGSFNNVRNWMRNIEQHASDGVSKV 120
Query: 134 LVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIF 178
LV NK D ++ V++ E+ + L++ G TS K + NVN F
Sbjct: 121 LVGNKSDAEEKRVISTEQGEALAKEFGIPFFETSAKANTNVNDAF 165
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 32/50 (64%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
+G+ V+L +WDTAGQE F IT AYYRGA ++T+ D SF +W
Sbjct: 56 DGKRVKLQIWDTAGQERFRTITNAYYRGAHGILLTYDVTDEGSFNNVRNW 105
>gi|119617271|gb|EAW96865.1| hCG24991, isoform CRA_a [Homo sapiens]
gi|119617272|gb|EAW96866.1| hCG24991, isoform CRA_a [Homo sapiens]
Length = 203
Score = 97.4 bits (241), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/175 (34%), Positives = 87/175 (49%), Gaps = 8/175 (4%)
Query: 34 GAQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKA 93
G +I F+ D+F + + + K + EG++++L +WDTAGQE F IT A
Sbjct: 20 GKTCLIIRFA---EDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQERFKTITTA 76
Query: 94 YYRGAQACVITFSTIDRDSFEAAHSW-KMKVENECGEIPTVLVQNKIDLLDQSVVAPEEA 152
YYRGA ++ + D SFE +W K +EN + +L+ NK D+ + V E+A
Sbjct: 77 YYRGAMGIILAYDITDEKSFENIQNWMKSIMENASAGVEHLLLGNKCDMEAKRKVQKEQA 136
Query: 153 DLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSELRQQEEEYSINGNGLPPYT 207
D L+R G R TS K +NV+ F L L + S NGN PP T
Sbjct: 137 DKLAREHGIRFFETSAKSSMNVDEAFSSLARDI---LLKSGGRRSGNGNK-PPST 187
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 33/50 (66%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
EG++++L +WDTAGQE F IT AYYRGA ++ + D SFE +W
Sbjct: 53 EGKKIKLQVWDTAGQERFKTITTAYYRGAMGIILAYDITDEKSFENIQNW 102
>gi|195355659|ref|XP_002044308.1| GM10050 [Drosophila sechellia]
gi|194129619|gb|EDW51662.1| GM10050 [Drosophila sechellia]
Length = 224
Score = 97.1 bits (240), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 88/168 (52%), Gaps = 5/168 (2%)
Query: 35 AQACVITFSTIDR---DSFEAAHSWKMKVS-IKRTIKECEGEEVRLMLWDTAGQEEFDAI 90
+ CV S + R D F + H ++ S + R + +G +L +WDTAGQE F A+
Sbjct: 20 GEGCVGKTSLVLRYMEDRFNSQHLSTLQASFVSRKVSLEDGRRAQLNIWDTAGQERFHAL 79
Query: 91 TKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENECG-EIPTVLVQNKIDLLDQSVVAP 149
YYRG+ ++ + DRDSF+ SW ++ G EI ++V NK DL Q V
Sbjct: 80 GPIYYRGSDGALLVYDITDRDSFQKVKSWVRELRQMRGTEIALIIVGNKTDLEQQRAVTQ 139
Query: 150 EEADLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSELRQQEEEYS 197
++A +R +G + + TS KE+ V +F LT L +L Q++ + S
Sbjct: 140 DDALQYARTVGAQYVETSAKENEGVAELFELLTQLMLEQLSQRQPDAS 187
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 41/72 (56%), Gaps = 6/72 (8%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVSIKRTI 66
+G +L +WDTAGQE F A+ YYRG+ ++ + DRDSF+ SW R +
Sbjct: 59 DGRRAQLNIWDTAGQERFHALGPIYYRGSDGALLVYDITDRDSFQKVKSW------VREL 112
Query: 67 KECEGEEVRLML 78
++ G E+ L++
Sbjct: 113 RQMRGTEIALII 124
>gi|219127381|ref|XP_002183915.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217404638|gb|EEC44584.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 207
Score = 97.1 bits (240), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 49/144 (34%), Positives = 75/144 (52%), Gaps = 1/144 (0%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
DSF + + K + EG ++L +WDTAGQE F IT +Y+RGAQ ++ +
Sbjct: 36 DSFSPTFITTIGIDFKIKNVDVEGTRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDV 95
Query: 108 IDRDSFEAAHSWKMKVENECG-EIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
DR SFE+ +W +++ + +LV NK D+LD+ VV+ EE L+ G
Sbjct: 96 TDRRSFESIRNWISQIQQHADVHVNKILVGNKCDMLDEKVVSTEEGQKLASEFGIPFFEC 155
Query: 167 SVKEDINVNSIFRYLTTKCLSELR 190
S K DI+V S F ++ L+
Sbjct: 156 SAKNDIHVESSFMHIAKAVKDRLK 179
>gi|60826641|gb|AAX36766.1| RAB13 member RAS oncogene family [synthetic construct]
gi|60826676|gb|AAX36767.1| RAB13 member RAS oncogene family [synthetic construct]
Length = 204
Score = 97.1 bits (240), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 86/175 (49%), Gaps = 8/175 (4%)
Query: 34 GAQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKA 93
G +I F+ D+F + + + K + EG++++L +WDTAGQE F IT A
Sbjct: 20 GKTCLIIRFA---EDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQERFKTITTA 76
Query: 94 YYRGAQACVITFSTIDRDSFEAAHSWKMKV-ENECGEIPTVLVQNKIDLLDQSVVAPEEA 152
YYRGA ++ + D SFE +W + EN + +L+ NK D+ + V E+A
Sbjct: 77 YYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCDMEAKRKVQKEQA 136
Query: 153 DLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSELRQQEEEYSINGNGLPPYT 207
D L+R G R TS K +NV+ F L L + S NGN PP T
Sbjct: 137 DKLAREHGIRFFETSAKSSMNVDEAFSSLARDI---LLKSGGRRSGNGNK-PPST 187
>gi|440291312|gb|ELP84581.1| hypothetical protein EIN_171560 [Entamoeba invadens IP1]
Length = 207
Score = 97.1 bits (240), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 77/144 (53%), Gaps = 1/144 (0%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
D++ H + V K + G V+L +WDTAGQE F IT +YYRGAQ ++ +S
Sbjct: 31 DTYTDTHIATIGVDFKIKTVQINGLNVKLQIWDTAGQERFRTITSSYYRGAQGIIVVYSV 90
Query: 108 IDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
ID +F+ W ++E E + +L+ NK DL D+ V E+ L+ +L M +
Sbjct: 91 IDLQTFQNVRQWLQEIERYASESVIKLLIGNKCDLEDERAVTVEQGQELANSLNVSFMES 150
Query: 167 SVKEDINVNSIFRYLTTKCLSELR 190
S K+ +NV+ +F + T + L+
Sbjct: 151 SAKKALNVDELFNKIATDIMKNLQ 174
>gi|67470746|ref|XP_651336.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|13537429|dbj|BAB40669.1| small GTPase Rab1A [Entamoeba histolytica]
gi|56468058|gb|EAL45948.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|449708204|gb|EMD47708.1| small GTPase Rab1A, putative [Entamoeba histolytica KU27]
Length = 205
Score = 97.1 bits (240), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 78/144 (54%), Gaps = 1/144 (0%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
D++ H + V K + +G+ V+L +WDTAGQE F IT +YYRGAQ ++ +S
Sbjct: 31 DTYTDTHIATIGVDFKIKTVQIDGKNVKLQIWDTAGQERFRTITSSYYRGAQGIIVVYSV 90
Query: 108 IDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
ID +F+ W ++E E + +L+ NK DL D+ V E+ L+ +L M
Sbjct: 91 IDLQTFQNVRQWLQEIERYASETVIKLLIGNKCDLDDERAVTVEQGQELANSLNVSFMEA 150
Query: 167 SVKEDINVNSIFRYLTTKCLSELR 190
S K+ +NV+ +F + T + ++
Sbjct: 151 SAKKSLNVDELFIRIATDIMKNIQ 174
>gi|54696266|gb|AAV38505.1| RAB13, member RAS oncogene family [synthetic construct]
gi|61365863|gb|AAX42775.1| RAB13 member RAS oncogene family [synthetic construct]
Length = 204
Score = 97.1 bits (240), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 86/175 (49%), Gaps = 8/175 (4%)
Query: 34 GAQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKA 93
G +I F+ D+F + + + K + EG++++L +WDTAGQE F IT A
Sbjct: 20 GKTCLIIRFA---EDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQERFKTITTA 76
Query: 94 YYRGAQACVITFSTIDRDSFEAAHSWKMKV-ENECGEIPTVLVQNKIDLLDQSVVAPEEA 152
YYRGA ++ + D SFE +W + EN + +L+ NK D+ + V E+A
Sbjct: 77 YYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCDMEAKRKVQKEQA 136
Query: 153 DLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSELRQQEEEYSINGNGLPPYT 207
D L+R G R TS K +NV+ F L L + S NGN PP T
Sbjct: 137 DKLAREHGIRFFETSAKSSMNVDEAFSSLARDI---LLKSGGRRSGNGNK-PPST 187
>gi|4506363|ref|NP_002861.1| ras-related protein Rab-13 isoform 1 [Homo sapiens]
gi|386782037|ref|NP_001248220.1| ras-related protein Rab-13 [Macaca mulatta]
gi|297663399|ref|XP_002810164.1| PREDICTED: ras-related protein Rab-13 [Pongo abelii]
gi|332220479|ref|XP_003259383.1| PREDICTED: ras-related protein Rab-13 [Nomascus leucogenys]
gi|332810355|ref|XP_522433.3| PREDICTED: ras-related protein Rab-13 [Pan troglodytes]
gi|397492531|ref|XP_003817175.1| PREDICTED: ras-related protein Rab-13 [Pan paniscus]
gi|402856334|ref|XP_003892746.1| PREDICTED: ras-related protein Rab-13 [Papio anubis]
gi|426331749|ref|XP_004026857.1| PREDICTED: ras-related protein Rab-13 [Gorilla gorilla gorilla]
gi|1710016|sp|P51153.1|RAB13_HUMAN RecName: Full=Ras-related protein Rab-13; AltName: Full=Cell
growth-inhibiting gene 4 protein; Flags: Precursor
gi|20379072|gb|AAM21096.1|AF498948_1 small GTP binding protein RAB13 [Homo sapiens]
gi|452320|emb|CAA53266.1| rab 13 [Homo sapiens]
gi|12654003|gb|AAH00799.1| RAB13, member RAS oncogene family [Homo sapiens]
gi|41350395|gb|AAS00485.1| growth-inhibiting gene 4 protein [Homo sapiens]
gi|54696268|gb|AAV38506.1| RAB13, member RAS oncogene family [Homo sapiens]
gi|54696270|gb|AAV38507.1| RAB13, member RAS oncogene family [Homo sapiens]
gi|61356004|gb|AAX41198.1| RAB13 member RAS oncogene family [synthetic construct]
gi|61356015|gb|AAX41199.1| RAB13 member RAS oncogene family [synthetic construct]
gi|68085671|gb|AAH73168.2| RAB13, member RAS oncogene family [Homo sapiens]
gi|117645128|emb|CAL38030.1| hypothetical protein [synthetic construct]
gi|117645354|emb|CAL38143.1| hypothetical protein [synthetic construct]
gi|117645750|emb|CAL38342.1| hypothetical protein [synthetic construct]
gi|117646294|emb|CAL38614.1| hypothetical protein [synthetic construct]
gi|117646436|emb|CAL38685.1| hypothetical protein [synthetic construct]
gi|117646828|emb|CAL37529.1| hypothetical protein [synthetic construct]
gi|119573633|gb|EAW53248.1| hCG1996054, isoform CRA_e [Homo sapiens]
gi|119573634|gb|EAW53249.1| hCG1996054, isoform CRA_e [Homo sapiens]
gi|119573635|gb|EAW53250.1| hCG1996054, isoform CRA_e [Homo sapiens]
gi|158256592|dbj|BAF84269.1| unnamed protein product [Homo sapiens]
gi|208967230|dbj|BAG73629.1| RAB13, member RAS oncogene family [synthetic construct]
gi|355558499|gb|EHH15279.1| hypothetical protein EGK_01346 [Macaca mulatta]
gi|380785379|gb|AFE64565.1| ras-related protein Rab-13 [Macaca mulatta]
gi|384942334|gb|AFI34772.1| ras-related protein Rab-13 [Macaca mulatta]
gi|740475|prf||2005309B rab13 GTPase
Length = 203
Score = 97.1 bits (240), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 86/175 (49%), Gaps = 8/175 (4%)
Query: 34 GAQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKA 93
G +I F+ D+F + + + K + EG++++L +WDTAGQE F IT A
Sbjct: 20 GKTCLIIRFA---EDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQERFKTITTA 76
Query: 94 YYRGAQACVITFSTIDRDSFEAAHSWKMKV-ENECGEIPTVLVQNKIDLLDQSVVAPEEA 152
YYRGA ++ + D SFE +W + EN + +L+ NK D+ + V E+A
Sbjct: 77 YYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCDMEAKRKVQKEQA 136
Query: 153 DLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSELRQQEEEYSINGNGLPPYT 207
D L+R G R TS K +NV+ F L L + S NGN PP T
Sbjct: 137 DKLAREHGIRFFETSAKSSMNVDEAFSSLARDI---LLKSGGRRSGNGNK-PPST 187
>gi|357135065|ref|XP_003569132.1| PREDICTED: ras-related protein RABD1-like [Brachypodium distachyon]
Length = 205
Score = 97.1 bits (240), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 53/147 (36%), Positives = 80/147 (54%), Gaps = 7/147 (4%)
Query: 64 RTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 123
RT+ E +G+ V+L +WDTAGQE F IT +YYRGA +I + D +SF W ++
Sbjct: 49 RTV-ELDGKSVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDMESFNNVKQWLSEI 107
Query: 124 ENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLT 182
+ + + +LV NK DL+D VV EEA L+ +LG + TS KE INV F ++
Sbjct: 108 DRYASDSVCKLLVGNKCDLVDSKVVDTEEAKALADSLGMTFLETSAKESINVEKAFLTMS 167
Query: 183 TKCLSELRQQ-----EEEYSINGNGLP 204
++ + Q + ++G G P
Sbjct: 168 SEIKKRMATQPAAERKPTVHLHGKGQP 194
>gi|389584207|dbj|GAB66940.1| small GTPase Rab1A [Plasmodium cynomolgi strain B]
Length = 221
Score = 97.1 bits (240), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 64/184 (34%), Positives = 96/184 (52%), Gaps = 9/184 (4%)
Query: 30 AYYRGAQACVIT-FST----IDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQ 84
A RG Q +I F T I+ D++ ++ + V K E E + ++L +WDTAGQ
Sbjct: 29 ARKRGRQTYLINRFETENDQINDDTYTDSYISTIGVDFKIKTIEIEDKIIKLQIWDTAGQ 88
Query: 85 EEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLD 143
E F IT +YYRGAQ +I + DRDSF +W +++E E + +L+ NKIDL +
Sbjct: 89 ERFRTITSSYYRGAQGIIIVYDVTDRDSFNNVKNWIIEIEKYASEDVQKILIGNKIDLKN 148
Query: 144 QSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLT--TKCLSEL-RQQEEEYSING 200
V+ EE L+ + + + TS K NV F+ + K S+L QQ+ +IN
Sbjct: 149 DRNVSYEEGKELADSCNIQFLETSAKIAHNVEQAFKTMAHEIKNKSQLENQQKGRANINL 208
Query: 201 NGLP 204
N P
Sbjct: 209 NAKP 212
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 36/54 (66%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 60
E + ++L +WDTAGQE F IT +YYRGAQ +I + DRDSF +W +++
Sbjct: 74 EDKIIKLQIWDTAGQERFRTITSSYYRGAQGIIIVYDVTDRDSFNNVKNWIIEI 127
>gi|410222046|gb|JAA08242.1| RAB13, member RAS oncogene family [Pan troglodytes]
Length = 203
Score = 96.7 bits (239), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 86/175 (49%), Gaps = 8/175 (4%)
Query: 34 GAQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKA 93
G +I F+ D+F + + + K + EG++++L +WDTAGQE F IT A
Sbjct: 20 GKTCLIIRFA---EDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQERFKTITTA 76
Query: 94 YYRGAQACVITFSTIDRDSFEAAHSWKMKV-ENECGEIPTVLVQNKIDLLDQSVVAPEEA 152
YYRGA ++ + D SFE +W + EN + +L+ NK D+ + V E+A
Sbjct: 77 YYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCDMEAKRKVQKEQA 136
Query: 153 DLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSELRQQEEEYSINGNGLPPYT 207
D L+R G R TS K +NV+ F L L + S NGN PP T
Sbjct: 137 DKLAREHGIRFFETSAKSSMNVDEAFSSLARDI---LLKSGGRRSGNGNK-PPST 187
>gi|40225607|gb|AAH09227.2| RAB13 protein, partial [Homo sapiens]
Length = 195
Score = 96.7 bits (239), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 86/175 (49%), Gaps = 8/175 (4%)
Query: 34 GAQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKA 93
G +I F+ D+F + + + K + EG++++L +WDTAGQE F IT A
Sbjct: 12 GKTCLIIRFA---EDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQERFKTITTA 68
Query: 94 YYRGAQACVITFSTIDRDSFEAAHSWKMKV-ENECGEIPTVLVQNKIDLLDQSVVAPEEA 152
YYRGA ++ + D SFE +W + EN + +L+ NK D+ + V E+A
Sbjct: 69 YYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCDMEAKRKVQKEQA 128
Query: 153 DLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSELRQQEEEYSINGNGLPPYT 207
D L+R G R TS K +NV+ F L L + S NGN PP T
Sbjct: 129 DKLAREHGIRFFETSAKSSMNVDEAFSSLARDI---LLKSGGRRSGNGNK-PPST 179
>gi|189217748|ref|NP_001121315.1| uncharacterized protein LOC100158399 [Xenopus laevis]
gi|115528810|gb|AAI24979.1| LOC100158399 protein [Xenopus laevis]
Length = 201
Score = 96.7 bits (239), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 83/160 (51%), Gaps = 4/160 (2%)
Query: 34 GAQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKA 93
G ++ FS DSF + + + + K E EG++++L +WDTAGQE F IT A
Sbjct: 20 GKTCLIVRFS---EDSFNSTYISTIGIDFKIRTTEIEGKKIKLQVWDTAGQERFKTITTA 76
Query: 94 YYRGAQACVITFSTIDRDSFEAAHSWKMKV-ENECGEIPTVLVQNKIDLLDQSVVAPEEA 152
YYRGA ++ + D S+E +W + EN + +L+ NK D+ ++ V E
Sbjct: 77 YYRGAMGIILVYDITDERSYENIQNWMKSIKENASAGVERMLLGNKCDMENKRKVPKERG 136
Query: 153 DLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSELRQQ 192
+ L++ G R TS K +NV+ F L T L ++ ++
Sbjct: 137 EKLAKEHGIRFFETSAKSSLNVDESFNTLATDILMKISKR 176
>gi|407039382|gb|EKE39614.1| Rab family GTPase [Entamoeba nuttalli P19]
Length = 205
Score = 96.7 bits (239), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 78/144 (54%), Gaps = 1/144 (0%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
D++ H + V K + +G+ ++L +WDTAGQE F IT +YYRGAQ ++ +S
Sbjct: 31 DTYTDTHIATIGVDFKIKTVQIDGKNIKLQIWDTAGQERFRTITSSYYRGAQGIIVVYSV 90
Query: 108 IDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
ID +F+ W ++E E + +L+ NK DL D+ V E+ L+ +L M
Sbjct: 91 IDLQTFQNVRQWLQEIERYASETVIKLLIGNKCDLEDERAVTVEQGQELANSLNVSFMEA 150
Query: 167 SVKEDINVNSIFRYLTTKCLSELR 190
S K+ +NV+ +F + T + ++
Sbjct: 151 SAKKSLNVDELFIKIATDIMKNIQ 174
>gi|115728606|ref|XP_780763.2| PREDICTED: ras-related protein Rab-35-like [Strongylocentrotus
purpuratus]
Length = 204
Score = 96.7 bits (239), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 88/170 (51%), Gaps = 4/170 (2%)
Query: 34 GAQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKA 93
G + ++ F+ ++F ++ + V K + +GE+V+L +WDTAGQE F IT
Sbjct: 20 GKSSLLLRFAD---NTFSGSYITTIGVDFKIRTIDVKGEKVKLQIWDTAGQERFRTITST 76
Query: 94 YYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGEIPTVLVQNKIDLLDQSVVAPEEAD 153
YYRG ++ + +SF W +++ C ++ +LV NK D ++ VV E+A
Sbjct: 77 YYRGTHGVIVVYDVCSAESFVNVKRWLYEIDQNCEDVSRILVGNKNDAPERKVVETEDAQ 136
Query: 154 LLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSE-LRQQEEEYSINGNG 202
+ + +L TS KE+INV +F +T L + L Q + + N NG
Sbjct: 137 KFAEQMNIQLYETSAKENINVEEMFNGITALVLKQKLENQAKLNAPNDNG 186
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 29/51 (56%)
Query: 6 CEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
+GE+V+L +WDTAGQE F IT YYRG ++ + +SF W
Sbjct: 52 VKGEKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVCSAESFVNVKRW 102
>gi|156553809|ref|XP_001603302.1| PREDICTED: ras-related protein Rab-35-like [Nasonia vitripennis]
Length = 202
Score = 96.3 bits (238), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 85/169 (50%), Gaps = 4/169 (2%)
Query: 34 GAQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKA 93
G + ++ F+ ++F + + V K + +GE V+L +WDTAGQE F IT
Sbjct: 20 GKSSLLLRFAD---NTFNGNYITTIGVDFKIRTVDVDGERVKLQIWDTAGQERFRTITST 76
Query: 94 YYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGEIPT-VLVQNKIDLLDQSVVAPEEA 152
YYRG ++ + DSF W ++E+ C + +LV NK D +Q VV E+A
Sbjct: 77 YYRGTHGVIVVYDVTSGDSFANVKRWLHEIEHNCDVVVNRILVGNKNDAPNQKVVLTEDA 136
Query: 153 DLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSELRQQEEEYSINGN 201
+ +G +L TS K++ NV +F +T + L ++ +E + N
Sbjct: 137 QRFANQMGIKLFETSAKDNTNVEEMFMAITREVLRTKKESKERQATKTN 185
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 28/51 (54%)
Query: 6 CEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
+GE V+L +WDTAGQE F IT YYRG ++ + DSF W
Sbjct: 52 VDGERVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSGDSFANVKRW 102
>gi|443719875|gb|ELU09827.1| hypothetical protein CAPTEDRAFT_21277 [Capitella teleta]
Length = 201
Score = 96.3 bits (238), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 79/153 (51%), Gaps = 3/153 (1%)
Query: 34 GAQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKA 93
G + ++ FS ++F + + V K + GE+V+L +WDTAGQE F IT
Sbjct: 20 GKSSLLLRFSD---NTFSGTYITTIGVDFKIRTVDINGEKVKLQIWDTAGQERFRTITST 76
Query: 94 YYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGEIPTVLVQNKIDLLDQSVVAPEEAD 153
YYRG ++ + DSF W +++ C + +LV NK D D+ VV ++A
Sbjct: 77 YYRGTHGVIVVYDVSSGDSFANVKRWLHEIDQNCDVVNRILVGNKDDDPDRKVVLTQDAR 136
Query: 154 LLSRALGCRLMRTSVKEDINVNSIFRYLTTKCL 186
+ +G +L TS KE+INV +F +T+ L
Sbjct: 137 RFADQMGIQLFETSAKENINVEEMFLAITSLVL 169
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 28/50 (56%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
GE+V+L +WDTAGQE F IT YYRG ++ + DSF W
Sbjct: 53 NGEKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVSSGDSFANVKRW 102
>gi|328767509|gb|EGF77558.1| hypothetical protein BATDEDRAFT_20617 [Batrachochytrium
dendrobatidis JAM81]
Length = 208
Score = 96.3 bits (238), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 86/172 (50%), Gaps = 7/172 (4%)
Query: 34 GAQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKA 93
G ++ FS DSF + + + K E +G+ ++L +WDTAGQE F IT A
Sbjct: 24 GKSCLLLRFSD---DSFTPSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTA 80
Query: 94 YYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEA 152
YYRGA ++T+ D SF +W +E E + +L+ NK D+LD+ V++ E+
Sbjct: 81 YYRGAMGILLTYDVTDERSFNNIRNWIRNIEQHASEGVNKILIGNKCDILDKKVISKEQG 140
Query: 153 DLLSRALGCRLMRTSVKEDINVNSIFRYLT---TKCLSELRQQEEEYSINGN 201
L+ G + + TS K +I V F L K L + Q++ + GN
Sbjct: 141 QALADEHGIKFLETSAKSNIGVEEAFYMLARDIKKRLIDTAQEKTDLKTAGN 192
>gi|397620779|gb|EJK65905.1| hypothetical protein THAOC_13196 [Thalassiosira oceanica]
Length = 205
Score = 96.3 bits (238), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 47/132 (35%), Positives = 72/132 (54%), Gaps = 1/132 (0%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
+SF + + K E +G+ ++L +WDTAGQE F IT +Y+RGAQ ++ +
Sbjct: 33 ESFSPTFITTIGIDFKIKNVEVDGKRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDV 92
Query: 108 IDRDSFEAAHSWKMKVENECG-EIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
DR SFE+ +W +++ + +LV NK D+LD+ VV+ EE L++ G
Sbjct: 93 TDRRSFESIRNWISQIQQHADVHVNKILVGNKCDMLDEKVVSTEEGQKLAKEFGVDFYEC 152
Query: 167 SVKEDINVNSIF 178
S K DINV F
Sbjct: 153 SAKNDINVEPTF 164
>gi|88766387|gb|ABD49713.1| RAB/GTPase [Metarhizium anisopliae]
gi|322700923|gb|EFY92675.1| RAB/GTPase [Metarhizium acridum CQMa 102]
gi|322706646|gb|EFY98226.1| RAB/GTPase [Metarhizium anisopliae ARSEF 23]
Length = 203
Score = 96.3 bits (238), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 81/171 (47%), Gaps = 4/171 (2%)
Query: 34 GAQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKA 93
G C++ FS DSF + + + K E +G+ V+L +WDTAGQE F IT A
Sbjct: 22 GKSCCLLRFS---EDSFTPSFITTIGIDFKIRTIELDGKRVKLQIWDTAGQERFRTITTA 78
Query: 94 YYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEA 152
YYRGA ++ + D SF +W VE E + +L+ NK D D+ VV+ E+
Sbjct: 79 YYRGAMGILLVYDVTDERSFNNIRTWFQNVEQHATEGVNRILIGNKCDWEDKRVVSTEQG 138
Query: 153 DLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSELRQQEEEYSINGNGL 203
L+ LG + S K +IN++ F L L + G G+
Sbjct: 139 QALADELGIPFLEVSAKSNINIDKAFYSLAADIKKRLIDSSKNDQATGTGV 189
>gi|358385051|gb|EHK22648.1| secretion-related small GTPase [Trichoderma virens Gv29-8]
Length = 203
Score = 95.9 bits (237), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 77/149 (51%), Gaps = 4/149 (2%)
Query: 34 GAQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKA 93
G C++ FS DSF + + + K E +G+ V+L +WDTAGQE F IT A
Sbjct: 22 GKSCCLLRFS---EDSFTPSFITTIGIDFKIRTIELDGKRVKLQIWDTAGQERFRTITTA 78
Query: 94 YYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEA 152
YYRGA ++ + D SF+ +W VE E + +L+ NK D D+ VV+ E+
Sbjct: 79 YYRGAMGILLVYDVTDERSFQNIRTWFQNVEQHATEGVNKILIGNKCDWEDKRVVSTEQG 138
Query: 153 DLLSRALGCRLMRTSVKEDINVNSIFRYL 181
L+ LG + S K +IN++ F L
Sbjct: 139 QALADELGIPFLEVSAKSNINIDQAFYSL 167
>gi|426216683|ref|XP_004002587.1| PREDICTED: ras-related protein Rab-13 [Ovis aries]
gi|81674373|gb|AAI09841.1| RAB13, member RAS oncogene family [Bos taurus]
gi|296489679|tpg|DAA31792.1| TPA: ras-related protein Rab-13 [Bos taurus]
Length = 203
Score = 95.9 bits (237), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 84/175 (48%), Gaps = 8/175 (4%)
Query: 34 GAQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKA 93
G +I F+ D+F + + + K + EG++++L +WDTAGQE F IT A
Sbjct: 20 GKTCLIIRFA---EDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQERFKTITTA 76
Query: 94 YYRGAQACVITFSTIDRDSFEAAHSWKMKV-ENECGEIPTVLVQNKIDLLDQSVVAPEEA 152
YYRGA ++ + D SFE +W + EN + +L+ NK D+ + V E+A
Sbjct: 77 YYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCDMEAKRKVQKEQA 136
Query: 153 DLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSELRQQEEEYSINGNGLPPYT 207
D L+R G R TS K +NV+ F L L + + N PP T
Sbjct: 137 DKLAREHGIRFFETSAKSSMNVDEAFSSLARDIL----LKSGGRRLKNNNKPPST 187
>gi|384500796|gb|EIE91287.1| GTP-binding protein ypt2 [Rhizopus delemar RA 99-880]
Length = 193
Score = 95.9 bits (237), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 51/146 (34%), Positives = 76/146 (52%), Gaps = 4/146 (2%)
Query: 34 GAQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKA 93
G ++ FS DSF + + + K E +G+ ++L +WDTAGQE F IT A
Sbjct: 9 GKSCLLLRFSD---DSFTPSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTA 65
Query: 94 YYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEA 152
YYRGA ++ + T D SF +W +E E + +L+ NK D D+ V++ E+
Sbjct: 66 YYRGAMGILLVYDTTDERSFGNVRNWFSNIEQHASEGVNKILIGNKCDAEDKRVISKEQG 125
Query: 153 DLLSRALGCRLMRTSVKEDINVNSIF 178
+ L+ LG R M TS K +I V F
Sbjct: 126 ETLANELGIRFMETSAKANIGVEEAF 151
>gi|262401089|gb|ACY66447.1| putative ras-related protein Rab [Scylla paramamosain]
Length = 197
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 82/161 (50%), Gaps = 3/161 (1%)
Query: 34 GAQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKA 93
G + ++ F+ ++F + + V K E +GE V+L +WDTAGQE F IT
Sbjct: 16 GKSSLLLRFAD---NTFTGNYITTIGVDFKIRTLEVDGERVKLQIWDTAGQERFRTITST 72
Query: 94 YYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGEIPTVLVQNKIDLLDQSVVAPEEAD 153
YYRG ++ + + +SF W ++E C + +LV NK D D+ VV E+A
Sbjct: 73 YYRGTHGVIVVYDVTNGESFANVKRWLHEIEQNCEVVNRILVGNKNDCPDRKVVLYEDAK 132
Query: 154 LLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSELRQQEE 194
+ + L TS K++INV +F +T L ++Q++
Sbjct: 133 RFADQMTISLFETSAKDNINVEEMFTVMTKMVLQTKKEQKD 173
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 29/50 (58%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
+GE V+L +WDTAGQE F IT YYRG ++ + + +SF W
Sbjct: 49 DGERVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTNGESFANVKRW 98
>gi|440892898|gb|ELR45890.1| Ras-related protein Rab-13, partial [Bos grunniens mutus]
Length = 205
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 84/175 (48%), Gaps = 8/175 (4%)
Query: 34 GAQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKA 93
G +I F+ D+F + + + K + EG++++L +WDTAGQE F IT A
Sbjct: 22 GKTCLIIRFA---EDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQERFKTITTA 78
Query: 94 YYRGAQACVITFSTIDRDSFEAAHSWKMKV-ENECGEIPTVLVQNKIDLLDQSVVAPEEA 152
YYRGA ++ + D SFE +W + EN + +L+ NK D+ + V E+A
Sbjct: 79 YYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCDMEAKRKVQKEQA 138
Query: 153 DLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSELRQQEEEYSINGNGLPPYT 207
D L+R G R TS K +NV+ F L L + + N PP T
Sbjct: 139 DKLAREHGIRFFETSAKSSMNVDEAFSSLARDIL----LKSGGRRLKNNNKPPST 189
>gi|63102287|gb|AAH94846.1| RAB13 protein, partial [Homo sapiens]
Length = 244
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 86/175 (49%), Gaps = 8/175 (4%)
Query: 34 GAQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKA 93
G +I F+ D+F + + + K + EG++++L +WDTAGQE F IT A
Sbjct: 61 GKTCLIIRFA---EDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQERFKTITTA 117
Query: 94 YYRGAQACVITFSTIDRDSFEAAHSWKMKV-ENECGEIPTVLVQNKIDLLDQSVVAPEEA 152
YYRGA ++ + D SFE +W + EN + +L+ NK D+ + V E+A
Sbjct: 118 YYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCDMEAKRKVQKEQA 177
Query: 153 DLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSELRQQEEEYSINGNGLPPYT 207
D L+R G R TS K +NV+ F L L + S NGN PP T
Sbjct: 178 DKLAREHGIRFFETSAKSSMNVDEAFSSLARDI---LLKSGGRRSGNGNK-PPST 228
>gi|145507987|ref|XP_001439943.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834300|emb|CAI44509.1| rab_C22 [Paramecium tetraurelia]
gi|124407149|emb|CAK72546.1| unnamed protein product [Paramecium tetraurelia]
Length = 210
Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 92/169 (54%), Gaps = 7/169 (4%)
Query: 23 EFDAITKAYYRG----AQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLML 78
+FD + K G ++C++ S I+ ++F+ H + V I I + +G+ ++ +
Sbjct: 7 DFDYMFKFVIIGDSSVGKSCIL--SRINGNTFKDNHEVTLGVDIATKILKVQGKIIKARI 64
Query: 79 WDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGE-IPTVLVQN 137
WDTAGQE F +IT++YYRGA ++ F +R+SFE SW+ ++ E I +L+ N
Sbjct: 65 WDTAGQENFRSITRSYYRGAIGIMLVFDMKNRESFENIKSWQQEINQYANEKIKIILIAN 124
Query: 138 KIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCL 186
K DL+++ V EE L++ +G + + TS N+ + L+ L
Sbjct: 125 KSDLMNKREVTTEEGQQLAKKIGSQYIETSALNGKNIEETLQLLSQSIL 173
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 39/55 (70%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVS 61
+G+ ++ +WDTAGQE F +IT++YYRGA ++ F +R+SFE SW+ +++
Sbjct: 56 QGKIIKARIWDTAGQENFRSITRSYYRGAIGIMLVFDMKNRESFENIKSWQQEIN 110
>gi|261332947|emb|CBH15942.1| GTP-binding protein homolog RAB1 [Trypanosoma brucei gambiense
DAL972]
Length = 226
Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/115 (42%), Positives = 61/115 (53%)
Query: 74 VRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGEIPTV 133
V L LWDTAGQE ++ YY A ++ FST +SF WK VE CG IP V
Sbjct: 60 VNLFLWDTAGQETVSSVKDIYYLDAAVAILVFSTDSSESFARIEMWKRCVERVCGSIPMV 119
Query: 134 LVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSE 188
L Q K DL Q+ V EE + L+ L L R S K+ NV +F Y+ C+SE
Sbjct: 120 LCQTKFDLARQAAVVAEEVEKLAVKLQLPLFRVSTKDGFNVTQLFEYVAAMCVSE 174
Score = 44.7 bits (104), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 25/47 (53%)
Query: 11 VRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWK 57
V L LWDTAGQE ++ YY A ++ FST +SF WK
Sbjct: 60 VNLFLWDTAGQETVSSVKDIYYLDAAVAILVFSTDSSESFARIEMWK 106
>gi|384490321|gb|EIE81543.1| GTP-binding protein ypt2 [Rhizopus delemar RA 99-880]
Length = 158
Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/146 (34%), Positives = 77/146 (52%), Gaps = 4/146 (2%)
Query: 34 GAQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKA 93
G ++ FS DSF + + + K E +G+ ++L +WDTAGQE F IT A
Sbjct: 6 GKSCLLLRFSD---DSFTPSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTA 62
Query: 94 YYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEA 152
YYRGA ++ + T D SF +W +E E + +L+ NK D+ D+ V++ E+
Sbjct: 63 YYRGAMGILLVYDTTDEKSFGNVRNWFSNIEQHASEGVNKILIGNKCDMEDKRVISKEQG 122
Query: 153 DLLSRALGCRLMRTSVKEDINVNSIF 178
+ L+ LG + M TS K +I V F
Sbjct: 123 EALASELGIQFMETSAKANIGVEEAF 148
>gi|296425671|ref|XP_002842363.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295638628|emb|CAZ86554.1| unnamed protein product [Tuber melanosporum]
Length = 206
Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/196 (32%), Positives = 92/196 (46%), Gaps = 12/196 (6%)
Query: 19 AGQEEFDAITKAYYRGAQA-----CVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEE 73
AG +D + K G C++ FS DSF + + + K E +G+
Sbjct: 2 AGSRNYDFLIKLLLIGDSGVGKSCCLLRFS---EDSFTPSFITTIGIDFKIRTIELDGKR 58
Query: 74 VRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGE-IPT 132
V+L +WDTAGQE F IT AYYRGA ++ + D SF +W VE E +
Sbjct: 59 VKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRTWFSNVEQHATEGVNK 118
Query: 133 VLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLTT---KCLSEL 189
+L+ NK D ++ VV+ E L+ LG M S K +INV F L T K + +
Sbjct: 119 ILIGNKCDWEEKRVVSTERGQQLADELGIPFMEVSAKSNINVEKAFFSLATDIKKRIMDT 178
Query: 190 RQQEEEYSINGNGLPP 205
+ EE+ G+ + P
Sbjct: 179 ARAEEKAGGQGSVVDP 194
>gi|71748054|ref|XP_823082.1| small GTPase [Trypanosoma brucei brucei strain 927/4 GUTat10.1]
gi|70832750|gb|EAN78254.1| small GTPase, putative [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
Length = 226
Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/115 (42%), Positives = 61/115 (53%)
Query: 74 VRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGEIPTV 133
V L LWDTAGQE ++ YY A ++ FST +SF WK VE CG IP V
Sbjct: 60 VNLFLWDTAGQETVSSVKDIYYLDAAVAILVFSTDSSESFARIEMWKRCVERVCGSIPMV 119
Query: 134 LVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSE 188
L Q K DL Q+ V EE + L+ L L R S K+ NV +F Y+ C+SE
Sbjct: 120 LCQTKFDLARQAAVVAEEVEKLAVKLQLPLFRVSTKDGFNVTQLFEYVAAMCVSE 174
Score = 44.7 bits (104), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 25/47 (53%)
Query: 11 VRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWK 57
V L LWDTAGQE ++ YY A ++ FST +SF WK
Sbjct: 60 VNLFLWDTAGQETVSSVKDIYYLDAAVAILVFSTDSSESFARIEMWK 106
>gi|90085076|dbj|BAE91279.1| unnamed protein product [Macaca fascicularis]
Length = 187
Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 84/171 (49%), Gaps = 11/171 (6%)
Query: 34 GAQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKA 93
G +I F+ D+F + + + K + EG++++L +WDTAGQE F IT A
Sbjct: 20 GKTCLIIRFA---EDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQERFKTITTA 76
Query: 94 YYRGAQACVITFSTIDRDSFEAAHSWKMKV-ENECGEIPTVLVQNKIDLLDQSVVAPEEA 152
YYRGA ++ + D SFE +W + EN + +L+ NK D+ + V E+A
Sbjct: 77 YYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCDMEAKRKVQKEQA 136
Query: 153 DLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSE-------LRQQEEEY 196
D L+R G R TS K +NV+ F L L + RQQ +Y
Sbjct: 137 DKLAREHGIRFFETSAKSSMNVDEAFSSLARDILLKSGGPEIRKRQQASQY 187
>gi|354478940|ref|XP_003501672.1| PREDICTED: ras-related protein Rab-13-like [Cricetulus griseus]
gi|81909832|sp|Q5KTJ6.1|RAB13_MESAU RecName: Full=Ras-related protein Rab-13; Flags: Precursor
gi|57157445|dbj|BAD83700.1| Rab13 [Mesocricetus auratus]
Length = 203
Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/154 (34%), Positives = 77/154 (50%), Gaps = 4/154 (2%)
Query: 34 GAQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKA 93
G +I F+ D+F + + + K E EG+ ++L +WDTAGQE F IT A
Sbjct: 20 GKTCLIIRFA---EDNFNNTYISTIGIDFKIRTVEIEGKRIKLQVWDTAGQERFKTITTA 76
Query: 94 YYRGAQACVITFSTIDRDSFEAAHSWKMKV-ENECGEIPTVLVQNKIDLLDQSVVAPEEA 152
YYRGA ++ + D SFE +W + EN + +L+ NK D+ + V E+A
Sbjct: 77 YYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCDMEAKRKVLKEQA 136
Query: 153 DLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCL 186
D L+R G R TS K +NV+ F L L
Sbjct: 137 DKLAREHGIRFFETSAKSSMNVDEAFNSLARDIL 170
>gi|123508821|ref|XP_001329730.1| Ras family protein [Trichomonas vaginalis G3]
gi|62736290|gb|AAX97474.1| small Rab GTPase RabE1 [Trichomonas vaginalis]
gi|121912777|gb|EAY17595.1| Ras family protein [Trichomonas vaginalis G3]
Length = 201
Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/126 (36%), Positives = 76/126 (60%), Gaps = 2/126 (1%)
Query: 69 CEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENECG 128
C+G+ V + LWDTAGQEE+ ++ YY+ AQA ++ +S ID SFE WK ++ N G
Sbjct: 46 CQGKNVDIQLWDTAGQEEYHSLAPIYYKDAQAALLVYSVIDSTSFERMMQWKNELVNTRG 105
Query: 129 E-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLS 187
E I ++ NKID++ Q V+ P++ + +GC++ S K ++ +F+ L K L
Sbjct: 106 ENIKLIIAANKIDMVSQRVITPQQGLDFANKVGCQIFEVSAKTGEGIDMLFQAL-AKTLL 164
Query: 188 ELRQQE 193
E+ Q++
Sbjct: 165 EIPQKK 170
Score = 66.2 bits (160), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 46/74 (62%), Gaps = 6/74 (8%)
Query: 5 ICEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVSIKR 64
IC+G+ V + LWDTAGQEE+ ++ YY+ AQA ++ +S ID SFE WK ++ R
Sbjct: 45 ICQGKNVDIQLWDTAGQEEYHSLAPIYYKDAQAALLVYSVIDSTSFERMMQWKNELVNTR 104
Query: 65 TIKECEGEEVRLML 78
GE ++L++
Sbjct: 105 ------GENIKLII 112
>gi|313236131|emb|CBY11455.1| unnamed protein product [Oikopleura dioica]
Length = 178
Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 70/119 (58%), Gaps = 1/119 (0%)
Query: 70 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGE 129
EG++++L +WDTAGQE F IT YYRGA V+ + D +SF W +++N C +
Sbjct: 34 EGKKIKLQIWDTAGQERFRTITATYYRGAHGVVVVYDLTDAESFTGVQKWINEIQNHCED 93
Query: 130 IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSE 188
+P VLV NK+D ++ VV +A++ ++ + TS K +I V +F +T + L +
Sbjct: 94 VPRVLVGNKVDSPNR-VVEKNDAEMYAQQQNIKYFETSAKSNIGVEEMFTEITRQALHQ 151
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 31/50 (62%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
EG++++L +WDTAGQE F IT YYRGA V+ + D +SF W
Sbjct: 34 EGKKIKLQIWDTAGQERFRTITATYYRGAHGVVVVYDLTDAESFTGVQKW 83
>gi|241077|gb|AAB20687.1| synaptic vesicle specific GTP-binding protein [Discopyge ommata]
Length = 218
Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/160 (36%), Positives = 83/160 (51%), Gaps = 4/160 (2%)
Query: 48 DSFEAAHSWKMKVSIK-RTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFS 106
DSF +A + + K +T+ E + V+L +WDTAGQE + IT AYYRGA ++ +
Sbjct: 45 DSFTSAFVSTVGIDFKVKTVYRNE-KRVKLQIWDTAGQERYRTITTAYYRGAMGFLLMYD 103
Query: 107 TIDRDSFEAAHSWKMKVENEC-GEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMR 165
++DSF A H W +++ +LV NK DL D VV EE L+ LG
Sbjct: 104 ITNQDSFGAVHDWATQIKTYSWDNAQVILVGNKSDLEDNRVVPTEEGKRLADELGFEFFE 163
Query: 166 TSVKEDINVNSIF-RYLTTKCLSELRQQEEEYSINGNGLP 204
S KE+INV +F R + C+ E + S+ GN P
Sbjct: 164 ASAKENINVKQVFERLVDIICVKMSESLEVDPSVLGNKNP 203
>gi|19115492|ref|NP_594580.1| GTPase Ypt2 [Schizosaccharomyces pombe 972h-]
gi|141305|sp|P17609.1|YPT2_SCHPO RecName: Full=GTP-binding protein ypt2; AltName: Full=SEC4 homolog
gi|5144|emb|CAA36707.1| unnamed protein product [Schizosaccharomyces pombe]
gi|5150|emb|CAA37045.1| unnamed protein product [Schizosaccharomyces pombe]
gi|2414662|emb|CAB16405.1| GTPase Ypt2 [Schizosaccharomyces pombe]
Length = 200
Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 85/171 (49%), Gaps = 4/171 (2%)
Query: 34 GAQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKA 93
G ++ FS DSF + + + K E +G+ ++L +WDTAGQE F IT A
Sbjct: 21 GKSCLLLRFS---EDSFTPSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTA 77
Query: 94 YYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEA 152
YYRGA ++ + D+ SF+ +W VE E + +L+ NK D DQ V+ E+
Sbjct: 78 YYRGAMGILLLYDVTDKKSFDNVRTWFSNVEQHASENVYKILIGNKCDCEDQRQVSFEQG 137
Query: 153 DLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSELRQQEEEYSINGNGL 203
L+ LG + + S K ++NV+ F L + + E E+S N +
Sbjct: 138 QALADELGVKFLEASAKTNVNVDEAFFTLAREIKKQKIDAENEFSNQANNV 188
>gi|157136703|ref|XP_001656883.1| ras-related protein Rab, putative [Aedes aegypti]
gi|94469070|gb|ABF18384.1| RAB protein [Aedes aegypti]
gi|108869891|gb|EAT34116.1| AAEL013620-PA [Aedes aegypti]
Length = 203
Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 82/162 (50%), Gaps = 3/162 (1%)
Query: 34 GAQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKA 93
G + +I FS ++F ++ + V K GE V+L +WDTAGQE F IT
Sbjct: 20 GKSSLLIRFSD---NTFSGSYITTIGVDFKIRTVVINGERVKLQIWDTAGQERFRTITNT 76
Query: 94 YYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGEIPTVLVQNKIDLLDQSVVAPEEAD 153
YYRG ++ + + +SF W ++E C + VLV NK D + VV E+A
Sbjct: 77 YYRGTHGVIVVYDVTNGESFANVKRWLQEIEANCDVVNKVLVGNKNDDPARKVVITEDAQ 136
Query: 154 LLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSELRQQEEE 195
+ + +L TS K++INV +F +T + L +Q +++
Sbjct: 137 RFANQMDIQLFETSAKDNINVEEMFLAITEQVLRHKKQTQKQ 178
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 29/52 (55%)
Query: 5 ICEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
+ GE V+L +WDTAGQE F IT YYRG ++ + + +SF W
Sbjct: 51 VINGERVKLQIWDTAGQERFRTITNTYYRGTHGVIVVYDVTNGESFANVKRW 102
>gi|334322507|ref|XP_003340260.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein Rab-13-like
[Monodelphis domestica]
Length = 201
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 87/175 (49%), Gaps = 8/175 (4%)
Query: 34 GAQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKA 93
G +I F+ D+F + + + + K + G++++L +WDTAGQE F IT A
Sbjct: 20 GKTCLIIRFA---EDNFNSTYISTIGIDFKIRTVDIXGKKIKLQVWDTAGQERFKTITTA 76
Query: 94 YYRGAQACVITFSTIDRDSFEAAHSWKMKV-ENECGEIPTVLVQNKIDLLDQSVVAPEEA 152
YYRGA ++ + D SFE +W + EN + +L+ NK D+ + V E+A
Sbjct: 77 YYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCDMEVKRKVQKEQA 136
Query: 153 DLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSELRQQEEEYSINGNGLPPYT 207
+ L+R G R TS K +NV+ F L L + ++ S N N PP T
Sbjct: 137 EKLAREHGIRFFETSAKSSLNVDEAFNSLARDILLKSGRR----SGNSNKAPPTT 187
>gi|340519584|gb|EGR49822.1| secretion-related GTPase [Trichoderma reesei QM6a]
Length = 203
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 76/149 (51%), Gaps = 4/149 (2%)
Query: 34 GAQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKA 93
G C++ FS DSF + + + K E +G+ V+L +WDTAGQE F IT A
Sbjct: 22 GKSCCLLRFS---EDSFTPSFITTIGIDFKIRTIELDGKRVKLQIWDTAGQERFRTITTA 78
Query: 94 YYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEA 152
YYRGA ++ + D SF +W VE E + +L+ NK D D+ VV+ E+
Sbjct: 79 YYRGAMGILLVYDVTDERSFSNIRTWFQNVEQHATEGVNKILIGNKCDWEDKRVVSTEQG 138
Query: 153 DLLSRALGCRLMRTSVKEDINVNSIFRYL 181
L+ LG + S K +IN++ F L
Sbjct: 139 QALADELGIPFLEVSAKSNINIDQAFYSL 167
>gi|403302550|ref|XP_003941919.1| PREDICTED: ras-related protein Rab-13 [Saimiri boliviensis
boliviensis]
Length = 202
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 86/175 (49%), Gaps = 8/175 (4%)
Query: 34 GAQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKA 93
G +I F+ D+F + + + K + EG++++L +WDTAGQE F IT A
Sbjct: 20 GKTCLIIRFA---EDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQERFKTITTA 76
Query: 94 YYRGAQACVITFSTIDRDSFEAAHSWKMKV-ENECGEIPTVLVQNKIDLLDQSVVAPEEA 152
YYRGA ++ + D SFE +W + EN + +L+ NK D+ + V E+A
Sbjct: 77 YYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCDMEAKRKVQKEQA 136
Query: 153 DLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSELRQQEEEYSINGNGLPPYT 207
+ L+R G R TS K +NV+ F L L + S NGN PP T
Sbjct: 137 NKLAREHGIRFFETSAKSSMNVDEAFSSLARDI---LLKSGGRRSGNGNK-PPST 187
>gi|156402311|ref|XP_001639534.1| predicted protein [Nematostella vectensis]
gi|156226663|gb|EDO47471.1| predicted protein [Nematostella vectensis]
Length = 200
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 85/168 (50%), Gaps = 3/168 (1%)
Query: 34 GAQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKA 93
G I F D D+F + + K E +G++++L +WDTAGQE F IT +
Sbjct: 19 GVGKTCILFRFSD-DAFNTTFISTIGIDFKIKTIEMQGKKIKLQIWDTAGQERFHTITTS 77
Query: 94 YYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEA 152
YYRGA ++ + +F+ W +E E + +++ NK D+ D+ +V+ E
Sbjct: 78 YYRGAMGIMLVYDITQEKTFDNISKWLRNIEEHANEDVEKMILGNKCDMDDRRIVSRERG 137
Query: 153 DLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCL-SELRQQEEEYSIN 199
+ ++R G R + TS K +IN+ F+YL L EL + EE S N
Sbjct: 138 EQIAREHGIRFLETSAKTNINIEQAFQYLAQDILKKELNKDSEEPSNN 185
>gi|452988932|gb|EME88687.1| hypothetical protein MYCFIDRAFT_58012 [Pseudocercospora fijiensis
CIRAD86]
Length = 206
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 82/171 (47%), Gaps = 9/171 (5%)
Query: 19 AGQEEFDAITKAYYRGAQA-----CVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEE 73
AG +D + K G C++ FS DSF + + + K E +G+
Sbjct: 2 AGTRNYDFLIKLLLIGDSGVGKSCCLLRFS---EDSFTPSFITTIGIDFKIRTIELDGKR 58
Query: 74 VRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGE-IPT 132
V+L +WDTAGQE F IT AYYRGA ++ + D SF +W VE E +
Sbjct: 59 VKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRTWFSNVEQHATEGVNK 118
Query: 133 VLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLTT 183
+L+ NK D ++ V+ E+ L+ LG M S K +INV+ F L T
Sbjct: 119 ILIGNKCDWEEKRAVSTEQGQALADELGIPFMEVSAKSNINVDKAFYSLAT 169
>gi|340057443|emb|CCC51789.1| putative small G-protein [Trypanosoma vivax Y486]
Length = 230
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/132 (41%), Positives = 74/132 (56%), Gaps = 5/132 (3%)
Query: 74 VRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGEIPTV 133
V+LMLWDTAG F++IT+AYYRGA A ++ F T DR SFE +WK ++ CG I V
Sbjct: 59 VKLMLWDTAGHSAFNSITRAYYRGAAAAILAFGTDDRKSFENVDAWKQRISESCGSISIV 118
Query: 134 LVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSELRQQE 193
L Q K D+ ++ + EEA+ L+ L L R S K++ NV +F Y CL E
Sbjct: 119 LCQTKFDMAQEAAITGEEAEQLAVRLRLPLFRVSTKDNFNVTELFEYAANMCLCEAADNA 178
Query: 194 EEYSINGNGLPP 205
+G PP
Sbjct: 179 PP-----SGTPP 185
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 38/51 (74%)
Query: 11 VRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVS 61
V+LMLWDTAG F++IT+AYYRGA A ++ F T DR SFE +WK ++S
Sbjct: 59 VKLMLWDTAGHSAFNSITRAYYRGAAAAILAFGTDDRKSFENVDAWKQRIS 109
>gi|358393423|gb|EHK42824.1| secretion related small GTPase SRG1 [Trichoderma atroviride IMI
206040]
Length = 205
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 76/149 (51%), Gaps = 4/149 (2%)
Query: 34 GAQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKA 93
G C++ FS DSF + + + K E +G+ V+L +WDTAGQE F IT A
Sbjct: 24 GKSCCLLRFS---EDSFTPSFITTIGIDFKIRTIELDGKRVKLQIWDTAGQERFRTITTA 80
Query: 94 YYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEA 152
YYRGA ++ + D SF +W VE E + +L+ NK D D+ VV+ E+
Sbjct: 81 YYRGAMGILLVYDVTDERSFANIRTWFQNVEQHATEGVNKILIGNKCDWEDKRVVSTEQG 140
Query: 153 DLLSRALGCRLMRTSVKEDINVNSIFRYL 181
L+ LG + S K +IN++ F L
Sbjct: 141 QALADELGIPFLEVSAKSNINIDQAFYSL 169
>gi|66792866|ref|NP_001019711.1| ras-related protein Rab-13 [Bos taurus]
gi|75069879|sp|Q58DS5.1|RAB13_BOVIN RecName: Full=Ras-related protein Rab-13; Flags: Precursor
gi|61553216|gb|AAX46369.1| RAB13, member RAS oncogene family [Bos taurus]
Length = 203
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 84/175 (48%), Gaps = 8/175 (4%)
Query: 34 GAQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKA 93
G +I F+ D+F + + + + + EG++++L +WDTAGQE F IT A
Sbjct: 20 GKTCLIIRFA---EDNFNNTYISTIGIDFRIRTVDIEGKKIKLQVWDTAGQERFKTITTA 76
Query: 94 YYRGAQACVITFSTIDRDSFEAAHSWKMKV-ENECGEIPTVLVQNKIDLLDQSVVAPEEA 152
YYRGA ++ + D SFE +W + EN + +L+ NK D+ + V E+A
Sbjct: 77 YYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCDMEAKRKVQKEQA 136
Query: 153 DLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSELRQQEEEYSINGNGLPPYT 207
D L+R G R TS K +NV+ F L L + + N PP T
Sbjct: 137 DKLAREHGIRFFETSAKSSMNVDEAFSSLARDIL----LKSGGRRLKNNNKPPST 187
>gi|354467032|ref|XP_003495975.1| PREDICTED: ras-related protein Rab-35-like [Cricetulus griseus]
Length = 338
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 88/167 (52%), Gaps = 10/167 (5%)
Query: 25 DAITKAYYR--GAQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTA 82
D++ + ++R G + ++ F+ ++F ++ + V K E GE+V+L +WDTA
Sbjct: 146 DSLERQFHRSVGKSSLLLRFAD---NTFSGSYITTIGVDFKIRTVEINGEKVKLQIWDTA 202
Query: 83 GQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGEIPTVLVQNKIDLL 142
GQE F IT YYRG ++ + +SF W ++ C ++ +LV NK D
Sbjct: 203 GQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEINQNCDDVCRILVGNKNDDP 262
Query: 143 DQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSEL 189
++ VV E+A + +G +L TS KE++NV +F C++EL
Sbjct: 263 ERKVVETEDAYKFAGQMGIQLFETSAKENVNVEEMF-----NCITEL 304
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 28/49 (57%)
Query: 8 GEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
GE+V+L +WDTAGQE F IT YYRG ++ + +SF W
Sbjct: 191 GEKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRW 239
>gi|218195930|gb|EEC78357.1| hypothetical protein OsI_18114 [Oryza sativa Indica Group]
gi|222629897|gb|EEE62029.1| hypothetical protein OsJ_16811 [Oryza sativa Japonica Group]
Length = 206
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/146 (34%), Positives = 76/146 (52%), Gaps = 1/146 (0%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
DS+ + + V K E +G+ V+L +WDTAGQE F IT +YYRGA +I +
Sbjct: 31 DSYIDTYISTIGVDFKIRTIELDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDV 90
Query: 108 IDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
D +SF W +++ + + +LV NK DL+D VV EEA + +LG + T
Sbjct: 91 TDMESFNNVKQWLSEIDRYASDSVCKLLVGNKCDLVDSKVVDTEEAKAFAESLGISFLET 150
Query: 167 SVKEDINVNSIFRYLTTKCLSELRQQ 192
S KE INV F +++ + Q
Sbjct: 151 SAKESINVEEAFLTMSSDIKKRMATQ 176
>gi|400597721|gb|EJP65451.1| RAB/GTPase protein [Beauveria bassiana ARSEF 2860]
Length = 206
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 76/149 (51%), Gaps = 4/149 (2%)
Query: 34 GAQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKA 93
G C++ FS DSF + + + K E +G+ V+L +WDTAGQE F IT A
Sbjct: 24 GKSCCLLRFS---EDSFTPSFITTIGIDFKIRTIELDGKRVKLQIWDTAGQERFRTITTA 80
Query: 94 YYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEA 152
YYRGA ++ + D SF +W VE E + +L+ NK D D+ V++ E+
Sbjct: 81 YYRGAMGILLVYDVTDERSFNNIRTWFQNVEQHATEGVNKILIGNKCDWEDKRVISEEQG 140
Query: 153 DLLSRALGCRLMRTSVKEDINVNSIFRYL 181
L+ LG + S K +IN++ F L
Sbjct: 141 QALADELGIPFLEVSAKSNINIDKAFYSL 169
>gi|346976474|gb|EGY19926.1| GTP-binding protein SAS1 [Verticillium dahliae VdLs.17]
Length = 208
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 76/149 (51%), Gaps = 4/149 (2%)
Query: 34 GAQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKA 93
G C++ FS DSF + + + K E +G+ V+L +WDTAGQE F IT A
Sbjct: 22 GKSCCLLRFS---EDSFTPSFITTIGIDFKIRTIELDGKRVKLQIWDTAGQERFRTITTA 78
Query: 94 YYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEA 152
YYRGA ++ + D SF +W VE E + +L+ NK D D+ VV+ E+
Sbjct: 79 YYRGAMGILLVYDVTDERSFNNIRTWFANVEQHATEGVNKILIGNKCDWEDKRVVSTEQG 138
Query: 153 DLLSRALGCRLMRTSVKEDINVNSIFRYL 181
L+ LG + S K +IN++ F L
Sbjct: 139 QQLADELGIPFLEVSAKSNINIDKAFYSL 167
>gi|396491326|ref|XP_003843542.1| similar to GTP-binding protein [Leptosphaeria maculans JN3]
gi|312220121|emb|CBY00063.1| similar to GTP-binding protein [Leptosphaeria maculans JN3]
Length = 206
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 84/171 (49%), Gaps = 9/171 (5%)
Query: 19 AGQEEFDAITKAYYRGAQA-----CVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEE 73
AG +D + K G C++ FS DSF + + + K E +G+
Sbjct: 2 AGSRNYDFLIKLLLIGDSGVGKSCCLLRFS---EDSFTPSFITTIGIDFKIRTIELDGKR 58
Query: 74 VRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGE-IPT 132
V+L +WDTAGQE F IT AYYRGA ++ + D+ SFE +W VE E +
Sbjct: 59 VKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDQRSFENIRTWFSNVEQHATEGVNK 118
Query: 133 VLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLTT 183
+L+ NK D ++ V+ E+ L+ LG + S K +INV+ F L +
Sbjct: 119 ILIGNKCDWEEKRAVSTEQGQALADELGIPFLEVSAKSNINVDKAFYSLAS 169
>gi|52353602|gb|AAU44168.1| putative rab1 small GTP-binding protein [Oryza sativa Japonica
Group]
Length = 205
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/146 (34%), Positives = 76/146 (52%), Gaps = 1/146 (0%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
DS+ + + V K E +G+ V+L +WDTAGQE F IT +YYRGA +I +
Sbjct: 30 DSYIDTYISTIGVDFKIRTIELDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDV 89
Query: 108 IDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
D +SF W +++ + + +LV NK DL+D VV EEA + +LG + T
Sbjct: 90 TDMESFNNVKQWLSEIDRYASDSVCKLLVGNKCDLVDSKVVDTEEAKAFAESLGISFLET 149
Query: 167 SVKEDINVNSIFRYLTTKCLSELRQQ 192
S KE INV F +++ + Q
Sbjct: 150 SAKESINVEEAFLTMSSDIKKRMATQ 175
>gi|89257549|gb|ABD65039.1| GTP-binding protein, putative [Brassica oleracea]
Length = 189
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 81/165 (49%), Gaps = 6/165 (3%)
Query: 42 FSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQAC 101
S I DS+ ++ + V K E +G+ ++L +WDTAGQE F IT +YYRGA
Sbjct: 12 LSVILDDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGI 71
Query: 102 VITFSTIDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALG 160
++T+ D++SF W +++ E + +LV NK DL Q VV+ E A + LG
Sbjct: 72 IVTYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKNDLTSQKVVSTETAQAFADELG 131
Query: 161 CRLMRTSVKEDINVNSIFRYLTTKCLSELRQQEEEYSINGNGLPP 205
+ TS K NV F +T + + Q +G PP
Sbjct: 132 IPFLETSAKNATNVEEAFMAMTAAIKTRMASQP-----SGGAKPP 171
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 33/50 (66%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
+G+ ++L +WDTAGQE F IT +YYRGA ++T+ D++SF W
Sbjct: 40 DGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVTYDVTDQESFNNVKQW 89
>gi|156095590|ref|XP_001613830.1| small GTPase Rab1A [Plasmodium vivax Sal-1]
gi|148802704|gb|EDL44103.1| small GTPase Rab1A, putative [Plasmodium vivax]
Length = 200
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/161 (35%), Positives = 86/161 (53%), Gaps = 4/161 (2%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
D++ ++ + V K E E + ++L +WDTAGQE F IT +YYRGAQ +I +
Sbjct: 31 DTYTDSYISTIGVDFKIKTIEIEDKIIKLQIWDTAGQERFRTITSSYYRGAQGIIIVYDV 90
Query: 108 IDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
DRDSF +W +++E E + VL+ NKIDL + V+ EE L+ + + + T
Sbjct: 91 TDRDSFNNVKNWIIEIEKYASEDVQKVLIGNKIDLKNDRNVSYEEGKELADSCNIQFLET 150
Query: 167 SVKEDINVNSIFRYLT--TKCLSEL-RQQEEEYSINGNGLP 204
S K NV F+ + K S+L QQ+ +IN N P
Sbjct: 151 SAKIAHNVEQAFKTMAHEIKNKSQLENQQKGRVNINLNAKP 191
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 36/54 (66%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 60
E + ++L +WDTAGQE F IT +YYRGAQ +I + DRDSF +W +++
Sbjct: 53 EDKIIKLQIWDTAGQERFRTITSSYYRGAQGIIIVYDVTDRDSFNNVKNWIIEI 106
>gi|338725027|ref|XP_003365067.1| PREDICTED: ras-related protein Rab-13-like [Equus caballus]
Length = 203
Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 78/154 (50%), Gaps = 4/154 (2%)
Query: 34 GAQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKA 93
G +I F+ D+F + + + K + EG++++L +WDTAGQE F IT A
Sbjct: 20 GKTCLIIRFA---EDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQERFKTITTA 76
Query: 94 YYRGAQACVITFSTIDRDSFEAAHSWKMKV-ENECGEIPTVLVQNKIDLLDQSVVAPEEA 152
YYRGA ++ + D SFE +W + EN + +L+ NK D+ + V E+A
Sbjct: 77 YYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCDMEAKRKVQKEQA 136
Query: 153 DLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCL 186
D L+R G R TS K +NV+ F L L
Sbjct: 137 DKLAREHGIRFFETSAKSSMNVDEAFSSLARDIL 170
>gi|311254230|ref|XP_001927266.2| PREDICTED: ras-related protein Rab-13 [Sus scrofa]
Length = 203
Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 78/154 (50%), Gaps = 4/154 (2%)
Query: 34 GAQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKA 93
G +I F+ D+F + + + K + EG++++L +WDTAGQE F IT A
Sbjct: 20 GKTCLIIRFA---EDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQERFKTITTA 76
Query: 94 YYRGAQACVITFSTIDRDSFEAAHSWKMKV-ENECGEIPTVLVQNKIDLLDQSVVAPEEA 152
YYRGA ++ + D SFE +W + EN + +L+ NK D+ + V E+A
Sbjct: 77 YYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCDMEAKRKVQKEQA 136
Query: 153 DLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCL 186
D L+R G R TS K +NV+ F L L
Sbjct: 137 DKLAREHGIRFFETSAKSSMNVDEAFSSLARDIL 170
>gi|401410672|ref|XP_003884784.1| hypothetical protein NCLIV_051820 [Neospora caninum Liverpool]
gi|325119202|emb|CBZ54756.1| hypothetical protein NCLIV_051820 [Neospora caninum Liverpool]
Length = 202
Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 82/155 (52%), Gaps = 1/155 (0%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
D++ ++ + V K + +G+ V+L +WDTAGQE F IT +YYRGA +I +
Sbjct: 31 DTYTESYISTIGVDFKIRTIDLDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDV 90
Query: 108 IDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
DRDSF +W M+++ E + +LV NK DL + VV+ EE + + R + T
Sbjct: 91 TDRDSFNNVKNWMMEIDKYAMEGVSKLLVGNKCDLTSKRVVSFEEGKEFADSCNMRFIET 150
Query: 167 SVKEDINVNSIFRYLTTKCLSELRQQEEEYSINGN 201
S K NV F + ++ + ++ +++ N N
Sbjct: 151 SAKNAHNVEQAFHIMASEIKARVQVNQQQSRPNAN 185
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 36/54 (66%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 60
+G+ V+L +WDTAGQE F IT +YYRGA +I + DRDSF +W M++
Sbjct: 53 DGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDRDSFNNVKNWMMEI 106
>gi|196008991|ref|XP_002114361.1| hypothetical protein TRIADDRAFT_50496 [Trichoplax adhaerens]
gi|190583380|gb|EDV23451.1| hypothetical protein TRIADDRAFT_50496 [Trichoplax adhaerens]
Length = 205
Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 84/162 (51%), Gaps = 5/162 (3%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
D+F + + K E +G++++L +WDTAGQE F IT +YYRGA ++ +
Sbjct: 32 DAFNTTFISTIGIDFKIKTIELQGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDL 91
Query: 108 IDRDSFEAAHSWKMKV-ENECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
R SFE + W + E+ ++ +++ NK+D D+ V EA+ L+R R M T
Sbjct: 92 TQRKSFENINKWIRNIDEHASKDVEKIILGNKVDEADKREVLKSEAEELARIHSIRFMET 151
Query: 167 SVKEDINVNSIFRYLTTKCLSEL----RQQEEEYSINGNGLP 204
S K +IN+++ F L L+++ Q E SI + P
Sbjct: 152 SAKTNINIDAAFLGLANDILNKMPGKRSQASETISIQNHSRP 193
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 33/50 (66%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
+G++++L +WDTAGQE F IT +YYRGA ++ + R SFE + W
Sbjct: 54 QGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDLTQRKSFENINKW 103
>gi|258577751|ref|XP_002543057.1| GTP-binding protein SAS1 [Uncinocarpus reesii 1704]
gi|237903323|gb|EEP77724.1| GTP-binding protein SAS1 [Uncinocarpus reesii 1704]
Length = 205
Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/189 (31%), Positives = 89/189 (47%), Gaps = 9/189 (4%)
Query: 19 AGQEEFDAITKAYYRGAQA-----CVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEE 73
AG +D + K G C++ FS DSF + + + K E EG+
Sbjct: 2 AGTRNYDFLIKLLLIGDSGVGKSCCLLRFS---EDSFTPSFITTIGIDFKIRTIELEGKR 58
Query: 74 VRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGE-IPT 132
V+L +WDTAGQE F IT AYYRGA ++ + D SF +W VE E +
Sbjct: 59 VKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRTWFSNVEQHASEGVHK 118
Query: 133 VLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSELRQQ 192
+L+ NK D ++ V+ E+ L+ LG + S K +INV+ F L ++ +
Sbjct: 119 MLIGNKCDWEEKRAVSTEQGQQLANELGIPFLEVSAKNNINVDKAFYTLASEIKKVMDTS 178
Query: 193 EEEYSINGN 201
+ E S + N
Sbjct: 179 KAEQSASHN 187
>gi|444319260|ref|XP_004180287.1| hypothetical protein TBLA_0D02650 [Tetrapisispora blattae CBS 6284]
gi|387513329|emb|CCH60768.1| hypothetical protein TBLA_0D02650 [Tetrapisispora blattae CBS 6284]
Length = 217
Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 93/177 (52%), Gaps = 8/177 (4%)
Query: 11 VRLMLWDTAGQEEFDAITKAYYRG----AQACVITFSTIDRDSFEAAHSWKMKVSIKRTI 66
+R + + + +D+I K G ++C++ +D D F + + + K
Sbjct: 4 LRTVSASSGNAKNYDSIMKILLIGDSGVGKSCLLV-RFVD-DKFNPSFITTIGIDFKIKT 61
Query: 67 KECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW-KMKVEN 125
+ G++++L LWDTAGQE F IT AYYRGA ++ + D ++FE +W K E+
Sbjct: 62 IDINGKKIKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDENTFENIRTWFKTVNEH 121
Query: 126 ECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLT 182
GE +LV NK D ++ V E+ + L++ LG + +S K+D NVN IF LT
Sbjct: 122 ANGEAQLLLVGNKSD-METRTVTYEQGESLAKELGIPFIESSAKDDKNVNEIFFTLT 177
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 49/91 (53%), Gaps = 8/91 (8%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVSIKRTI 66
G++++L LWDTAGQE F IT AYYRGA ++ + D ++FE +W +T+
Sbjct: 65 NGKKIKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDENTFENIRTW------FKTV 118
Query: 67 KECEGEEVRLMLWDTAGQEEFDAITKAYYRG 97
E E +L+L + + + T Y +G
Sbjct: 119 NEHANGEAQLLL--VGNKSDMETRTVTYEQG 147
>gi|340728156|ref|XP_003402394.1| PREDICTED: ras-related protein Rab-23-like, partial [Bombus
terrestris]
Length = 106
Score = 94.0 bits (232), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 41/55 (74%), Positives = 47/55 (85%)
Query: 68 ECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMK 122
E +GE+VRLMLWDTAGQEEFDAIT AYYRGA ACV+ +S DRDSF+A SWK+K
Sbjct: 52 EVDGEDVRLMLWDTAGQEEFDAITAAYYRGAHACVLAYSATDRDSFDAIPSWKLK 106
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/53 (75%), Positives = 46/53 (86%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMK 59
+GE+VRLMLWDTAGQEEFDAIT AYYRGA ACV+ +S DRDSF+A SWK+K
Sbjct: 54 DGEDVRLMLWDTAGQEEFDAITAAYYRGAHACVLAYSATDRDSFDAIPSWKLK 106
>gi|221057099|ref|XP_002259687.1| GTPase [Plasmodium knowlesi strain H]
gi|193809759|emb|CAQ40461.1| GTPase, putative [Plasmodium knowlesi strain H]
Length = 200
Score = 93.6 bits (231), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 56/161 (34%), Positives = 86/161 (53%), Gaps = 4/161 (2%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
D++ ++ + V K E E + ++L +WDTAGQE F IT +YYRGAQ +I +
Sbjct: 31 DTYTDSYISTIGVDFKIKTIEIEDKIIKLQIWDTAGQERFRTITSSYYRGAQGIIIVYDV 90
Query: 108 IDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
DRDSF +W +++E E + +L+ NKIDL + V+ EE L+ + + + T
Sbjct: 91 TDRDSFNNVKNWIIEIEKYASEDVQKILIGNKIDLKNDRNVSYEEGKELADSCNIQFLET 150
Query: 167 SVKEDINVNSIFRYLT--TKCLSEL-RQQEEEYSINGNGLP 204
S K NV F+ + K S+L QQ+ +IN N P
Sbjct: 151 SAKIAHNVEQAFKTMAHEIKNKSQLENQQKGRANINLNAKP 191
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 36/54 (66%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 60
E + ++L +WDTAGQE F IT +YYRGAQ +I + DRDSF +W +++
Sbjct: 53 EDKIIKLQIWDTAGQERFRTITSSYYRGAQGIIIVYDVTDRDSFNNVKNWIIEI 106
>gi|410908022|ref|XP_003967490.1| PREDICTED: ras-related protein Rab-8B-like [Takifugu rubripes]
Length = 207
Score = 93.6 bits (231), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 79/158 (50%), Gaps = 1/158 (0%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
DSF + + K E +G+ V+L +WDTAGQE F IT AYYRGA ++ + T
Sbjct: 31 DSFNTTFISTIGIDFKIRTIELDGKRVKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDT 90
Query: 108 IDRDSFEAAHSWKMKV-ENECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
+ SFE +W + E+ ++ +++ NK D+ D+ V+ + + L+ G + M T
Sbjct: 91 SNEKSFENIKNWIRNIEEHASSDVEKMILGNKCDMTDRRQVSKDRGEKLAIDYGVKFMET 150
Query: 167 SVKEDINVNSIFRYLTTKCLSELRQQEEEYSINGNGLP 204
S K +NV F + L L + + G+G P
Sbjct: 151 SAKSGLNVEEAFYTMARDILHNLSSKTTDSGAGGSGKP 188
>gi|384485106|gb|EIE77286.1| GTP-binding protein ypt1 [Rhizopus delemar RA 99-880]
Length = 207
Score = 93.6 bits (231), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 49/133 (36%), Positives = 76/133 (57%), Gaps = 3/133 (2%)
Query: 48 DSFEAAHSWKMKVSIK-RTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFS 106
D++ ++ + V K RTI E EG+ V+L +WDTAGQE F IT +YYRGA ++ +
Sbjct: 35 DTYTESYISTIGVDFKIRTI-ELEGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIVVYD 93
Query: 107 TIDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMR 165
D DSF+ W +++ E + +LV NK DL D+ V+ E+A+ + ++ L+
Sbjct: 94 VTDEDSFQHVKQWMQEIDRYAAEGVNKLLVGNKSDLTDKKAVSTEQANEFAESIKISLLE 153
Query: 166 TSVKEDINVNSIF 178
TS K+ NV F
Sbjct: 154 TSAKDATNVEQAF 166
Score = 62.8 bits (151), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 34/54 (62%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 60
EG+ V+L +WDTAGQE F IT +YYRGA ++ + D DSF+ W ++
Sbjct: 57 EGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDEDSFQHVKQWMQEI 110
>gi|89257443|gb|ABD64935.1| GTP-binding protein, putative [Brassica oleracea]
Length = 203
Score = 93.6 bits (231), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 79/159 (49%), Gaps = 6/159 (3%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
DS+ ++ + V K E +G+ ++L +WDTAGQE F IT +YYRGA ++T+
Sbjct: 31 DSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVTYDV 90
Query: 108 IDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
D++SF W +++ E + +LV NK DL Q VV+ E A + LG + T
Sbjct: 91 TDQESFNNVKQWLNEIDRYASENVNKLLVGNKNDLTSQKVVSTETAQAFADELGIPFLET 150
Query: 167 SVKEDINVNSIFRYLTTKCLSELRQQEEEYSINGNGLPP 205
S K NV F +T + + Q +G PP
Sbjct: 151 SAKNATNVEEAFMAMTAAIKTRMASQP-----SGGAKPP 184
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 33/50 (66%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
+G+ ++L +WDTAGQE F IT +YYRGA ++T+ D++SF W
Sbjct: 53 DGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVTYDVTDQESFNNVKQW 102
>gi|82541361|ref|XP_724926.1| GTPase [Plasmodium yoelii yoelii 17XNL]
gi|23479748|gb|EAA16491.1| putative GTPase [Plasmodium yoelii yoelii]
Length = 225
Score = 93.6 bits (231), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 55/161 (34%), Positives = 86/161 (53%), Gaps = 4/161 (2%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
D++ ++ + V K E + + ++L +WDTAGQE F IT +YYRGAQ +I +
Sbjct: 56 DTYTDSYISTIGVDFKIKTIEIDDKIIKLQIWDTAGQERFRTITSSYYRGAQGIIIVYDV 115
Query: 108 IDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
DRDSF +W +++E E + +L+ NKIDL + V+ EE L+ + + + T
Sbjct: 116 TDRDSFNNVKNWIIEIEKYASEDVQKILIGNKIDLKNDRSVSYEEGKELAESCNIQFLET 175
Query: 167 SVKEDINVNSIFRYLT--TKCLSEL-RQQEEEYSINGNGLP 204
S K NV F+ + K S+L QQ+ +IN N P
Sbjct: 176 SAKISHNVEQAFKTMAYEIKNKSQLENQQKGRANINLNAKP 216
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 34/50 (68%)
Query: 11 VRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 60
++L +WDTAGQE F IT +YYRGAQ +I + DRDSF +W +++
Sbjct: 82 IKLQIWDTAGQERFRTITSSYYRGAQGIIIVYDVTDRDSFNNVKNWIIEI 131
>gi|357380732|pdb|3TW8|B Chain B, Gef Domain Of Dennd 1b In Complex With Rab Gtpase Rab35
gi|357380734|pdb|3TW8|D Chain D, Gef Domain Of Dennd 1b In Complex With Rab Gtpase Rab35
Length = 181
Score = 93.6 bits (231), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 81/156 (51%), Gaps = 8/156 (5%)
Query: 34 GAQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKA 93
G + ++ F+ ++F ++ + V K E GE+V+L +WDTAGQE F IT
Sbjct: 21 GKSSLLLRFAD---NTFSGSYITTIGVDFKIRTVEINGEKVKLQIWDTAGQERFRTITST 77
Query: 94 YYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGEIPTVLVQNKIDLLDQSVVAPEEAD 153
YYRG ++ + +SF W ++ C ++ +LV NK D ++ VV E+A
Sbjct: 78 YYRGTHGVIVVYDVTSAESFVNVKRWLHEINQNCDDVCRILVGNKNDDPERKVVETEDAY 137
Query: 154 LLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSEL 189
+ +G +L TS KE++NV +F C++EL
Sbjct: 138 KFAGQMGIQLFETSAKENVNVEEMF-----NCITEL 168
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 31/54 (57%)
Query: 8 GEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVS 61
GE+V+L +WDTAGQE F IT YYRG ++ + +SF W +++
Sbjct: 55 GEKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEIN 108
>gi|327282620|ref|XP_003226040.1| PREDICTED: ras-related protein Rab-35-like [Anolis carolinensis]
gi|387017966|gb|AFJ51101.1| ras-related protein Rab-35-like [Crotalus adamanteus]
Length = 201
Score = 93.6 bits (231), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 81/156 (51%), Gaps = 8/156 (5%)
Query: 34 GAQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKA 93
G + ++ F+ ++F ++ + V K E GE+V+L +WDTAGQE F IT
Sbjct: 20 GKSSLLLRFAD---NTFSGSYITTIGVDFKIRTVEINGEKVKLQIWDTAGQERFRTITST 76
Query: 94 YYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGEIPTVLVQNKIDLLDQSVVAPEEAD 153
YYRG ++ + +SF W ++ C ++ +LV NK D ++ VV E+A
Sbjct: 77 YYRGTHGVIVVYDVTSAESFVNVKRWLHEINQNCDDVCRILVGNKNDDPERKVVETEDAY 136
Query: 154 LLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSEL 189
+ +G +L TS KE+INV +F C++EL
Sbjct: 137 KFAGQMGIQLFETSAKENINVEEMF-----NCITEL 167
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 28/49 (57%)
Query: 8 GEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
GE+V+L +WDTAGQE F IT YYRG ++ + +SF W
Sbjct: 54 GEKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRW 102
>gi|124087881|ref|XP_001346913.1| GTP-binding protein RAB2 homolog [Paramecium tetraurelia strain
d4-2]
gi|145474789|ref|XP_001423417.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|50057302|emb|CAH03286.1| GTP-binding protein RAB2 homolog [Paramecium tetraurelia]
gi|74834222|emb|CAI44486.1| rab_C66 [Paramecium tetraurelia]
gi|124390477|emb|CAK56019.1| unnamed protein product [Paramecium tetraurelia]
Length = 226
Score = 93.6 bits (231), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 87/157 (55%), Gaps = 5/157 (3%)
Query: 35 AQACVITFSTIDRDSFEAAHSWKMKVSI-KRTIKECEGEEVRLMLWDTAGQEEFDAITKA 93
++C++ T R F H + V R +K E ++++L +WDTAGQE F +IT++
Sbjct: 19 GKSCLLLQFTDSR--FRNEHDATIGVEFGSRNLKINE-KQIKLQIWDTAGQESFKSITRS 75
Query: 94 YYRGAQACVITFSTIDRDSFEAAHSWKMKVEN-ECGEIPTVLVQNKIDLLDQSVVAPEEA 152
YYRG+ ++ F +R+SF+ W +++ C +I V+V NKIDL D+ V EE
Sbjct: 76 YYRGSIGGILVFDVTNRESFDNVQKWHTEIQGYACDKIEMVIVGNKIDLEDRREVKTEEG 135
Query: 153 DLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSEL 189
++ G TS K NV+++F + TK L+++
Sbjct: 136 RKFAQKHGFDYFETSAKTGENVDAVFESMATKVLAKI 172
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 36/52 (69%)
Query: 9 EEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 60
++++L +WDTAGQE F +IT++YYRG+ ++ F +R+SF+ W ++
Sbjct: 54 KQIKLQIWDTAGQESFKSITRSYYRGSIGGILVFDVTNRESFDNVQKWHTEI 105
>gi|345803013|ref|XP_855128.2| PREDICTED: ras-related protein Rab-13 [Canis lupus familiaris]
Length = 293
Score = 93.6 bits (231), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 83/175 (47%), Gaps = 6/175 (3%)
Query: 34 GAQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKA 93
G +I F+ DSF + + + K + EG++++L +WDTAGQE F IT A
Sbjct: 110 GKTCLIIRFA---EDSFNNTYISTIGIDFKIRTVDVEGKKIKLQVWDTAGQERFKTITTA 166
Query: 94 YYRGAQACVITFSTIDRDSFEAAHSWKMKV-ENECGEIPTVLVQNKIDLLDQSVVAPEEA 152
YYRGA ++ + D SFE +W + EN + +L+ NK D+ + V E+A
Sbjct: 167 YYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCDMEAKRKVQKEQA 226
Query: 153 DLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCL--SELRQQEEEYSINGNGLPP 205
L+R G R TS K NV+ F L L S R+ + G L P
Sbjct: 227 IKLAREHGIRFFETSAKSSTNVDEAFSSLARDILLKSGGRRSGNSHKAPGTDLKP 281
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 44/75 (58%), Gaps = 7/75 (9%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVSIKRTI 66
EG++++L +WDTAGQE F IT AYYRGA ++ + D SFE +W ++I
Sbjct: 143 EGKKIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNW------MKSI 196
Query: 67 KECEGEEV-RLMLWD 80
KE V RL+L +
Sbjct: 197 KENASAGVERLLLGN 211
>gi|406868470|gb|EKD21507.1| secretion related Rab/GTPase [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 203
Score = 93.6 bits (231), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 81/171 (47%), Gaps = 9/171 (5%)
Query: 19 AGQEEFDAITKAYYRGAQA-----CVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEE 73
AG +D + K G C++ FS DSF + + + K E +G+
Sbjct: 2 AGTRNYDFLIKLLLIGDSGVGKSCCLLRFS---EDSFTPSFITTIGIDFKIRTIELDGKR 58
Query: 74 VRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGE-IPT 132
V+L +WDTAGQE F IT AYYRGA ++ + D SF +W VE E +
Sbjct: 59 VKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRTWFSNVEQHATEGVNK 118
Query: 133 VLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLTT 183
+L+ NK D D+ VV+ E L+ LG + S K +INV F L +
Sbjct: 119 ILIGNKCDWEDRRVVSTERGQQLADELGIPFLEVSAKSNINVEKAFYSLAS 169
>gi|348579296|ref|XP_003475416.1| PREDICTED: ras-related protein Rab-13-like [Cavia porcellus]
Length = 203
Score = 93.6 bits (231), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 52/156 (33%), Positives = 78/156 (50%), Gaps = 4/156 (2%)
Query: 34 GAQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKA 93
G +I F+ D+F + + + + K + EG++++L +WDTAGQE F IT A
Sbjct: 20 GKTCLIIRFA---EDNFNSTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQERFKTITTA 76
Query: 94 YYRGAQACVITFSTIDRDSFEAAHSWKMKV-ENECGEIPTVLVQNKIDLLDQSVVAPEEA 152
YYRGA ++ + D SFE +W + EN + +L+ NK D+ + V E A
Sbjct: 77 YYRGAMGIILVYDITDEKSFENIQTWMKSIKENASAGVERLLLGNKCDMEAKRKVQKERA 136
Query: 153 DLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSE 188
D L+R G R TS K NV+ F L L +
Sbjct: 137 DKLAREHGIRFFETSAKSSTNVDEAFSSLARDILHK 172
>gi|313227767|emb|CBY22916.1| unnamed protein product [Oikopleura dioica]
Length = 203
Score = 93.6 bits (231), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 75/139 (53%), Gaps = 2/139 (1%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
D+F ++ + V K +G+E+ L LWDTAGQE F ++ +++Y+GA V+ F
Sbjct: 29 DTFTEKYTGTIGVDFKLKKIFRKGQEINLQLWDTAGQERFKSLVRSFYKGANGVVVVFDI 88
Query: 108 IDRDSFEAAHSWKMKVENECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTS 167
R SFEA W +++ C EIP +LV NK+D V EA ++ G + + TS
Sbjct: 89 GSRSSFEALRRWMSEIQGNCDEIPRILVGNKVD--GPRSVTKAEAQEIASKYGLQYIETS 146
Query: 168 VKEDINVNSIFRYLTTKCL 186
K ++ ++ F LT + +
Sbjct: 147 AKTNVGIDETFDKLTDQIM 165
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 33/50 (66%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
+G+E+ L LWDTAGQE F ++ +++Y+GA V+ F R SFEA W
Sbjct: 51 KGQEINLQLWDTAGQERFKSLVRSFYKGANGVVVVFDIGSRSSFEALRRW 100
>gi|71895797|ref|NP_001025679.1| MGC97787 protein [Xenopus (Silurana) tropicalis]
gi|62530960|gb|AAH93468.1| MGC97787 protein [Xenopus (Silurana) tropicalis]
Length = 201
Score = 93.6 bits (231), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 81/160 (50%), Gaps = 4/160 (2%)
Query: 34 GAQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKA 93
G ++ FS DSF + + + + K E EG++++L +WDTAGQE F IT A
Sbjct: 20 GKTCLIVRFS---EDSFNSTYISTIGIDFKIRTTEIEGKKIKLQVWDTAGQERFKTITTA 76
Query: 94 YYRGAQACVITFSTIDRDSFEAAHSWKMKV-ENECGEIPTVLVQNKIDLLDQSVVAPEEA 152
YYRGA ++ + D S+E +W + EN + +L+ NK D+ ++ V E
Sbjct: 77 YYRGAMGIILVYDITDERSYENIQNWMKSIKENAAAGVERMLLGNKCDMENKRKVPKERG 136
Query: 153 DLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSELRQQ 192
+ L++ G R TS K NV+ F L L ++ ++
Sbjct: 137 EKLAKEHGIRFFETSAKSSQNVDEAFNTLARDILMKISKR 176
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 41/72 (56%), Gaps = 6/72 (8%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVSIKRTI 66
EG++++L +WDTAGQE F IT AYYRGA ++ + D S+E +W ++I
Sbjct: 53 EGKKIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDERSYENIQNW------MKSI 106
Query: 67 KECEGEEVRLML 78
KE V ML
Sbjct: 107 KENAAAGVERML 118
>gi|125812908|ref|XP_001339327.1| PREDICTED: ras-related protein Rab-35-like [Danio rerio]
Length = 209
Score = 93.2 bits (230), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 79/160 (49%), Gaps = 3/160 (1%)
Query: 34 GAQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKA 93
G + ++ F+ +SF ++ + V K E +GE V+L +WDTAGQE F IT
Sbjct: 21 GKSSLLLRFAD---NSFSGSYITTIGVDFKIRTVEIDGERVKLQIWDTAGQERFRTITST 77
Query: 94 YYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGEIPTVLVQNKIDLLDQSVVAPEEAD 153
YYR +I + + +SF W ++ C + +LV NK D + +V ++A
Sbjct: 78 YYRNTHGVIIVYDVTNPESFVNVKRWLNEISQNCDNVCKILVGNKNDDPSKKLVDTQDAM 137
Query: 154 LLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSELRQQE 193
++G RL TS KE+INV +F T L +Q +
Sbjct: 138 RFGESVGVRLFETSAKENINVEEMFMAFTHMVLRAKKQSQ 177
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 31/55 (56%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVS 61
+GE V+L +WDTAGQE F IT YYR +I + + +SF W ++S
Sbjct: 54 DGERVKLQIWDTAGQERFRTITSTYYRNTHGVIIVYDVTNPESFVNVKRWLNEIS 108
>gi|347969093|ref|XP_311848.5| AGAP003028-PA [Anopheles gambiae str. PEST]
gi|333467702|gb|EAA07904.5| AGAP003028-PA [Anopheles gambiae str. PEST]
Length = 202
Score = 93.2 bits (230), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 79/153 (51%), Gaps = 3/153 (1%)
Query: 34 GAQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKA 93
G + +I FS ++F ++ + V K GE V+L +WDTAGQE F IT
Sbjct: 20 GKSSLLIRFSD---NTFSGSYITTIGVDFKIRTVVINGERVKLQIWDTAGQERFRTITNT 76
Query: 94 YYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGEIPTVLVQNKIDLLDQSVVAPEEAD 153
YYRG ++ + + +SF W ++E+ C + VLV NK D + VV E+A+
Sbjct: 77 YYRGTHGVIVVYDVTNGESFGNVKRWLQEIESNCDIVNKVLVGNKNDDPTRKVVTTEDAE 136
Query: 154 LLSRALGCRLMRTSVKEDINVNSIFRYLTTKCL 186
+ + +L TS K+++NV +F +T + L
Sbjct: 137 RFANQMEIKLFETSAKDNLNVEEMFLAITEQVL 169
Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 29/52 (55%)
Query: 5 ICEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
+ GE V+L +WDTAGQE F IT YYRG ++ + + +SF W
Sbjct: 51 VINGERVKLQIWDTAGQERFRTITNTYYRGTHGVIVVYDVTNGESFGNVKRW 102
>gi|118369861|ref|XP_001018133.1| Ras family protein [Tetrahymena thermophila]
gi|5738166|gb|AAD50280.1|AF169950_1 putative intermediate compartment protein [Tetrahymena thermophila]
gi|89299900|gb|EAR97888.1| Ras family protein [Tetrahymena thermophila SB210]
gi|307777806|dbj|BAJ21299.1| Rab-family small GTPase Rab8A [Tetrahymena thermophila]
Length = 205
Score = 93.2 bits (230), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 86/154 (55%), Gaps = 4/154 (2%)
Query: 49 SFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTI 108
+F +AH + + K ++ +G+ V+L +WDTAGQE F IT+ YY+GA ++ +S
Sbjct: 34 TFTSAHLSTIGIDYKLKYEDIDGKRVKLQIWDTAGQERFRTITQNYYKGAMGIILAYSVT 93
Query: 109 DRDSFEAAHSWKMKVENECGE--IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
D +SF+ W MK NE + + +++ KID+ DQ V+ E + L+ G + T
Sbjct: 94 DPNSFKNIADW-MKQINERADPNVKKIIIATKIDMKDQRKVSTREGEELADRYGVKFFET 152
Query: 167 SVKEDINVNSIFRYLTTKCLSEL-RQQEEEYSIN 199
S KE +N++ F+ + + L + ++++ IN
Sbjct: 153 SAKEGVNISEAFKCIARQTLESMDTSTKDQFKIN 186
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 36/55 (65%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVS 61
+G+ V+L +WDTAGQE F IT+ YY+GA ++ +S D +SF+ W +++
Sbjct: 55 DGKRVKLQIWDTAGQERFRTITQNYYKGAMGIILAYSVTDPNSFKNIADWMKQIN 109
>gi|301789199|ref|XP_002930019.1| PREDICTED: ras-related protein Rab-35-like [Ailuropoda melanoleuca]
Length = 245
Score = 93.2 bits (230), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 76/142 (53%), Gaps = 5/142 (3%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
++F ++ + V K E +GE+V+L +WDTAGQE F IT YYRG ++ +
Sbjct: 75 NTFSGSYITTIGVDFKIRTVEIDGEKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDV 134
Query: 108 IDRDSFEAAHSWKMKVENECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTS 167
+SF W ++ C ++ +LV NK D ++ VV E+A + +G +L TS
Sbjct: 135 TSAESFVNVKRWLHEINQNCDDVCRILVGNKNDDPERKVVETEDAYKFAGQMGIQLFETS 194
Query: 168 VKEDINVNSIFRYLTTKCLSEL 189
KE++NV +F C++EL
Sbjct: 195 AKENVNVEEMF-----NCITEL 211
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 29/50 (58%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
+GE+V+L +WDTAGQE F IT YYRG ++ + +SF W
Sbjct: 97 DGEKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRW 146
>gi|387017950|gb|AFJ51093.1| ras-related protein Rab-13-like [Crotalus adamanteus]
Length = 200
Score = 93.2 bits (230), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 53/154 (34%), Positives = 76/154 (49%), Gaps = 4/154 (2%)
Query: 34 GAQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKA 93
G +I FS DSF + + + K E EG+ ++L +WDTAGQE F IT A
Sbjct: 20 GKTCLIIRFS---EDSFSGTYISTIGIDFKIRTVEVEGKRIKLQVWDTAGQERFKTITTA 76
Query: 94 YYRGAQACVITFSTIDRDSFEAAHSWKMKV-ENECGEIPTVLVQNKIDLLDQSVVAPEEA 152
YYRGA ++ + D SFE +W + EN + +L+ NK D+ + V+ ++A
Sbjct: 77 YYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCDMEVKRKVSRDQA 136
Query: 153 DLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCL 186
+ L R G R TS K +NV F L L
Sbjct: 137 EKLCREHGIRFFETSAKSSLNVEEAFNTLARDIL 170
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 44/80 (55%), Gaps = 7/80 (8%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVSIKRTI 66
EG+ ++L +WDTAGQE F IT AYYRGA ++ + D SFE +W ++I
Sbjct: 53 EGKRIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNW------MKSI 106
Query: 67 KECEGEEV-RLMLWDTAGQE 85
KE V RL+L + E
Sbjct: 107 KENASAGVERLLLGNKCDME 126
>gi|429863036|gb|ELA37621.1| rab GTPase [Colletotrichum gloeosporioides Nara gc5]
Length = 202
Score = 93.2 bits (230), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 84/170 (49%), Gaps = 6/170 (3%)
Query: 34 GAQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKA 93
G C++ FS DSF + + + K E +G+ V+L +WDTAGQE F IT A
Sbjct: 22 GKSCCLLRFS---EDSFTPSFITTIGIDFKIRTIELDGKRVKLQIWDTAGQERFRTITTA 78
Query: 94 YYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEA 152
YYRGA ++ + D SF +W VE E + +L+ NK D ++ VV+ E+
Sbjct: 79 YYRGAMGILLVYDVTDERSFNNIRTWFANVEQHATEGVNKILIGNKCDWEEKRVVSTEKG 138
Query: 153 DLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSEL--RQQEEEYSING 200
L+ LG + S K +IN++ F L L Q+ E+ + +G
Sbjct: 139 QQLADELGIPFLEVSAKSNINIDKAFYSLAADIKKRLIDNQKNEQPTASG 188
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 66/135 (48%), Gaps = 13/135 (9%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV------ 60
+G+ V+L +WDTAGQE F IT AYYRGA ++ + D SF +W V
Sbjct: 55 DGKRVKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRTWFANVEQHATE 114
Query: 61 SIKRTI--KECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHS 118
+ + + +C+ EE R++ + GQ+ D + + + I ID+ + A
Sbjct: 115 GVNKILIGNKCDWEEKRVVSTE-KGQQLADELGIPFLEVSAKSNI---NIDKAFYSLAAD 170
Query: 119 WKMK-VENECGEIPT 132
K + ++N+ E PT
Sbjct: 171 IKKRLIDNQKNEQPT 185
>gi|390476751|ref|XP_003735179.1| PREDICTED: ras-related protein Rab-13-like [Callithrix jacchus]
Length = 203
Score = 93.2 bits (230), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 78/154 (50%), Gaps = 4/154 (2%)
Query: 34 GAQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKA 93
G +I F+ D+F + + + K + EG++++L +WDTAGQE F IT A
Sbjct: 20 GKTCLIIRFA---EDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQERFKTITTA 76
Query: 94 YYRGAQACVITFSTIDRDSFEAAHSWKMKV-ENECGEIPTVLVQNKIDLLDQSVVAPEEA 152
YYRGA ++ + D SFE +W + EN + +L+ NK D+ + V E+A
Sbjct: 77 YYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCDMEAKRKVQKEQA 136
Query: 153 DLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCL 186
+ L+R G R TS K +NV+ F L L
Sbjct: 137 NKLAREHGIRFFETSAKSSMNVDEAFSSLARDIL 170
>gi|342885719|gb|EGU85701.1| hypothetical protein FOXB_03847 [Fusarium oxysporum Fo5176]
Length = 203
Score = 93.2 bits (230), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 76/149 (51%), Gaps = 4/149 (2%)
Query: 34 GAQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKA 93
G C++ FS DSF + + + K E +G+ V+L +WDTAGQE F IT A
Sbjct: 22 GKSCCLLRFS---EDSFTPSFITTIGIDFKIRTIELDGKRVKLQIWDTAGQERFRTITTA 78
Query: 94 YYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEA 152
YYRGA ++ + D SF +W VE E + +L+ NK D ++ VV+ E+
Sbjct: 79 YYRGAMGILLVYDVTDERSFNNIRTWFQNVEQHATEGVNKILIGNKCDWEEKRVVSTEQG 138
Query: 153 DLLSRALGCRLMRTSVKEDINVNSIFRYL 181
L+ LG + S K +IN++ F L
Sbjct: 139 QALADELGIPFLEVSAKSNINIDKAFYSL 167
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 32/54 (59%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 60
+G+ V+L +WDTAGQE F IT AYYRGA ++ + D SF +W V
Sbjct: 55 DGKRVKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRTWFQNV 108
>gi|229594642|ref|XP_001033234.3| Ras family protein [Tetrahymena thermophila]
gi|225566726|gb|EAR85571.3| Ras family protein [Tetrahymena thermophila SB210]
gi|307777756|dbj|BAJ21274.1| Rab-family small GTPase Rab1F [Tetrahymena thermophila]
Length = 211
Score = 93.2 bits (230), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 61/181 (33%), Positives = 94/181 (51%), Gaps = 9/181 (4%)
Query: 21 QEEFD-----AITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVR 75
Q+++D AIT + G + ++ F+ D F + V K + + V+
Sbjct: 4 QQDYDYAFKIAITGSSSVGKSSLMMRFTD---DVFNVVLIPTIGVDFKIRSFTVDNKIVK 60
Query: 76 LMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV-ENECGEIPTVL 134
L +WDTAGQE FDAI KAYY+G AC+I F DR +F+ + W K +N E+ +L
Sbjct: 61 LNIWDTAGQERFDAIIKAYYKGIHACLIVFDLTDRQTFQDVYKWFDKCKQNAKNEVKLIL 120
Query: 135 VQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSELRQQEE 194
V NK DL +Q V EEA L++ L + + TS K NV+ F L+ + + +Q +
Sbjct: 121 VGNKADLEEQRAVTYEEACNLAQELDMQYIETSAKSKQNVDQCFIQLSQDLIQQYIKQNK 180
Query: 195 E 195
+
Sbjct: 181 Q 181
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 49/82 (59%), Gaps = 7/82 (8%)
Query: 11 VRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECE 70
V+L +WDTAGQE FDAI KAYY+G AC+I F DR +F+ + W K K+
Sbjct: 59 VKLNIWDTAGQERFDAIIKAYYKGIHACLIVFDLTDRQTFQDVYKWFDKC------KQNA 112
Query: 71 GEEVRLML-WDTAGQEEFDAIT 91
EV+L+L + A EE A+T
Sbjct: 113 KNEVKLILVGNKADLEEQRAVT 134
>gi|302895243|ref|XP_003046502.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256727429|gb|EEU40789.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 203
Score = 93.2 bits (230), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 76/149 (51%), Gaps = 4/149 (2%)
Query: 34 GAQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKA 93
G C++ FS DSF + + + K E +G+ V+L +WDTAGQE F IT A
Sbjct: 22 GKSCCLLRFS---EDSFTPSFITTIGIDFKIRTIELDGKRVKLQIWDTAGQERFRTITTA 78
Query: 94 YYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEA 152
YYRGA ++ + D SF +W VE E + +L+ NK D ++ VV+ E+
Sbjct: 79 YYRGAMGILLVYDVTDERSFNNIRTWFQNVEQHATEGVNKILIGNKCDWEEKRVVSTEQG 138
Query: 153 DLLSRALGCRLMRTSVKEDINVNSIFRYL 181
L+ LG + S K +IN++ F L
Sbjct: 139 QALADELGIPFLEVSAKSNINIDKAFYSL 167
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 32/54 (59%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 60
+G+ V+L +WDTAGQE F IT AYYRGA ++ + D SF +W V
Sbjct: 55 DGKRVKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRTWFQNV 108
>gi|156035711|ref|XP_001585967.1| GTP-binding protein SAS1 [Sclerotinia sclerotiorum 1980]
gi|154698464|gb|EDN98202.1| GTP-binding protein SAS1 [Sclerotinia sclerotiorum 1980 UF-70]
Length = 203
Score = 93.2 bits (230), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 80/169 (47%), Gaps = 9/169 (5%)
Query: 19 AGQEEFDAITKAYY-----RGAQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEE 73
AG +D + K G C++ FS DSF + + + K E +G+
Sbjct: 2 AGTRNYDFLIKLLLIGDSGVGKSCCLLRFS---EDSFTPSFITTIGIDFKIRTIELDGKR 58
Query: 74 VRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGE-IPT 132
V+L +WDTAGQE F IT AYYRGA ++ + D SF +W VE E +
Sbjct: 59 VKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFTNIRTWFSNVEQHATEGVNK 118
Query: 133 VLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYL 181
+L+ NK D D+ VV+ E L+ LG + S K +INV F L
Sbjct: 119 ILIGNKCDWEDKRVVSTERGQQLADELGIPFLEVSAKSNINVEKAFYSL 167
>gi|46123663|ref|XP_386385.1| hypothetical protein FG06209.1 [Gibberella zeae PH-1]
gi|408398160|gb|EKJ77294.1| hypothetical protein FPSE_02569 [Fusarium pseudograminearum CS3096]
Length = 203
Score = 93.2 bits (230), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 76/149 (51%), Gaps = 4/149 (2%)
Query: 34 GAQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKA 93
G C++ FS DSF + + + K E +G+ V+L +WDTAGQE F IT A
Sbjct: 22 GKSCCLLRFS---EDSFTPSFITTIGIDFKIRTIELDGKRVKLQIWDTAGQERFRTITTA 78
Query: 94 YYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEA 152
YYRGA ++ + D SF +W VE E + +L+ NK D ++ VV+ E+
Sbjct: 79 YYRGAMGILLVYDVTDERSFNNIRTWFQNVEQHATEGVNKILIGNKCDWEEKRVVSTEQG 138
Query: 153 DLLSRALGCRLMRTSVKEDINVNSIFRYL 181
L+ LG + S K +IN++ F L
Sbjct: 139 QALADELGIPFLEVSAKSNINIDKAFYSL 167
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 32/54 (59%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 60
+G+ V+L +WDTAGQE F IT AYYRGA ++ + D SF +W V
Sbjct: 55 DGKRVKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRTWFQNV 108
>gi|348688677|gb|EGZ28491.1| hypothetical protein PHYSODRAFT_353544 [Phytophthora sojae]
Length = 202
Score = 93.2 bits (230), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 84/161 (52%), Gaps = 4/161 (2%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
DSF + + K E + ++V+L +WDTAGQE F IT +Y+RGAQ ++ +
Sbjct: 34 DSFSPTFITTIGIDFKIKNIELDNKKVKLQIWDTAGQERFRTITTSYFRGAQGILLVYDV 93
Query: 108 IDRDSFEAAHSWKMKVENECG-EIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
DR SF++ +W +++ + +L+ NK D+ D VV+ EE L+ G + T
Sbjct: 94 TDRASFQSIRNWVGQIQQHADVHVNKILIGNKCDMTDDKVVSTEEGQALADEYGVKFFET 153
Query: 167 SVKEDINVNSIFRYLTTKCLSELRQQ---EEEYSINGNGLP 204
S K +INV F + + + L ++ ++ S+N N P
Sbjct: 154 SAKNNINVEGGFIEIAREVKNRLMEEGGPHKKDSVNLNAKP 194
>gi|118366113|ref|XP_001016275.1| Ras family protein [Tetrahymena thermophila]
gi|89298042|gb|EAR96030.1| Ras family protein [Tetrahymena thermophila SB210]
gi|307777812|dbj|BAJ21302.1| Rab-family small GTPase Rab8F [Tetrahymena thermophila]
Length = 207
Score = 93.2 bits (230), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 47/132 (35%), Positives = 70/132 (53%), Gaps = 1/132 (0%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
D F +H M + K E +G++++L +WDTAGQE F IT+ YY+GA ++T+S
Sbjct: 35 DKFATSHLATMGIDFKSKKIEIDGKKIKLQVWDTAGQERFRQITQNYYKGAMGVIMTYSI 94
Query: 108 IDRDSFEAAHSWKMKVENECG-EIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
D++SF W ++ + I +LV NK D+ + V EE L+ G + T
Sbjct: 95 NDKESFRNIEVWMKQIRQQASVNIAKLLVGNKCDMESERQVTFEEGKSLADTFGIKFFET 154
Query: 167 SVKEDINVNSIF 178
S K DINV F
Sbjct: 155 SAKSDINVTEAF 166
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 37/54 (68%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 60
+G++++L +WDTAGQE F IT+ YY+GA ++T+S D++SF W ++
Sbjct: 57 DGKKIKLQVWDTAGQERFRQITQNYYKGAMGVIMTYSINDKESFRNIEVWMKQI 110
>gi|453083457|gb|EMF11503.1| GTP-binding protein SAS1 [Mycosphaerella populorum SO2202]
Length = 206
Score = 93.2 bits (230), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 81/169 (47%), Gaps = 9/169 (5%)
Query: 19 AGQEEFDAITKAYYRGAQA-----CVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEE 73
AG +D + K G C++ FS DSF + + + K E +G+
Sbjct: 2 AGTRNYDFLIKLLLIGDSGVGKSCCLLRFS---EDSFTPSFITTIGIDFKIRTIELDGKR 58
Query: 74 VRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGE-IPT 132
V+L +WDTAGQE F IT AYYRGA ++ + D SF +W VE E +
Sbjct: 59 VKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRTWFSNVEQHATEGVNK 118
Query: 133 VLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYL 181
+L+ NK D ++ V+ E+ L+ LG M S K +INV+ F L
Sbjct: 119 ILIGNKCDWEEKRAVSTEQGQALADELGIPFMEVSAKSNINVDKAFYSL 167
>gi|301117946|ref|XP_002906701.1| Rab8 family GTPase, putative [Phytophthora infestans T30-4]
gi|262108050|gb|EEY66102.1| Rab8 family GTPase, putative [Phytophthora infestans T30-4]
Length = 202
Score = 93.2 bits (230), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 84/161 (52%), Gaps = 4/161 (2%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
DSF + + K E + ++V+L +WDTAGQE F IT +Y+RGAQ ++ +
Sbjct: 34 DSFSPTFITTIGIDFKIKNIELDNKKVKLQIWDTAGQERFRTITTSYFRGAQGILLVYDV 93
Query: 108 IDRDSFEAAHSWKMKVENECG-EIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
DR SF++ +W +++ + +L+ NK D+ D VV+ EE L+ G + T
Sbjct: 94 TDRASFQSIRNWVGQIQQHADVHVNKILIGNKCDMTDDKVVSTEEGQALADEYGVKFFET 153
Query: 167 SVKEDINVNSIFRYLTTKCLSELRQQ---EEEYSINGNGLP 204
S K +INV F + + + L ++ ++ S+N N P
Sbjct: 154 SAKNNINVEGGFIEIAREVKNRLMEEGGPHKKDSVNLNAKP 194
>gi|410987028|ref|XP_003999810.1| PREDICTED: ras-related protein Rab-13 [Felis catus]
Length = 203
Score = 93.2 bits (230), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 77/154 (50%), Gaps = 4/154 (2%)
Query: 34 GAQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKA 93
G +I F+ D+F + + + K + EG++++L +WDTAGQE F IT A
Sbjct: 20 GKTCLIIRFA---EDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQERFKTITTA 76
Query: 94 YYRGAQACVITFSTIDRDSFEAAHSWKMKV-ENECGEIPTVLVQNKIDLLDQSVVAPEEA 152
YYRGA ++ + D SFE +W + EN + +L+ NK D+ + V E+A
Sbjct: 77 YYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVQRLLLGNKCDMEAKRRVRKEQA 136
Query: 153 DLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCL 186
D L+R G R TS K NV+ F L L
Sbjct: 137 DQLAREHGIRFFETSAKSSTNVDEAFSSLARDIL 170
>gi|313218156|emb|CBY41456.1| unnamed protein product [Oikopleura dioica]
gi|313222707|emb|CBY41703.1| unnamed protein product [Oikopleura dioica]
Length = 203
Score = 93.2 bits (230), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 75/139 (53%), Gaps = 2/139 (1%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
D+F ++ + V K +G+E+ L LWDTAGQE F ++ +++Y+GA V+ F
Sbjct: 29 DTFTEKYTGTIGVDFKLKKIFRKGQEINLQLWDTAGQERFKSLVRSFYKGANGVVVVFDI 88
Query: 108 IDRDSFEAAHSWKMKVENECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTS 167
R SFEA W +++ C EIP +LV NK+D V EA ++ G + + TS
Sbjct: 89 GSRSSFEALRRWMSEIQGNCDEIPRILVGNKVD--GPRSVTKAEAQEIASKYGLQYIETS 146
Query: 168 VKEDINVNSIFRYLTTKCL 186
K ++ ++ F LT + +
Sbjct: 147 AKTNVGIDETFDKLTDQIM 165
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 33/50 (66%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
+G+E+ L LWDTAGQE F ++ +++Y+GA V+ F R SFEA W
Sbjct: 51 KGQEINLQLWDTAGQERFKSLVRSFYKGANGVVVVFDIGSRSSFEALRRW 100
>gi|351702226|gb|EHB05145.1| Ras-related protein Rab-35 [Heterocephalus glaber]
Length = 203
Score = 93.2 bits (230), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 75/142 (52%), Gaps = 5/142 (3%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
++F ++ + V K E GE+V+L +WDTAGQE F IT YYRG ++ +
Sbjct: 33 NTFSGSYITTIGVDFKIRTVEINGEKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDV 92
Query: 108 IDRDSFEAAHSWKMKVENECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTS 167
+SF W ++ C ++ +LV NK D ++ VV E+A + +G +L TS
Sbjct: 93 TSAESFVNVKRWLHEINQNCDDVCRILVGNKNDDPERKVVETEDAYKFAGQMGIQLFETS 152
Query: 168 VKEDINVNSIFRYLTTKCLSEL 189
KE++NV +F C++EL
Sbjct: 153 AKENVNVEEMF-----NCITEL 169
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 28/49 (57%)
Query: 8 GEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
GE+V+L +WDTAGQE F IT YYRG ++ + +SF W
Sbjct: 56 GEKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRW 104
>gi|345569442|gb|EGX52308.1| hypothetical protein AOL_s00043g97 [Arthrobotrys oligospora ATCC
24927]
Length = 203
Score = 93.2 bits (230), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 80/169 (47%), Gaps = 9/169 (5%)
Query: 19 AGQEEFDAITKAYYRGAQA-----CVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEE 73
AG +D + K G C++ FS DSF + + + K + +G+
Sbjct: 2 AGSRNYDFLIKLLLIGDSGVGKSCCLLRFS---EDSFTPSFITTIGIDFKIRTIDLDGKR 58
Query: 74 VRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGE-IPT 132
++L +WDTAGQE F IT AYYRGA ++ + D SF +W VE E +
Sbjct: 59 IKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIQTWFQNVEQHATEGVNK 118
Query: 133 VLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYL 181
+L+ NK D ++ VV+ E L+ LG M S K +INV F L
Sbjct: 119 ILIGNKCDWEEKRVVSTERGQALANELGIPFMEVSAKANINVEEAFLLL 167
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 32/54 (59%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 60
+G+ ++L +WDTAGQE F IT AYYRGA ++ + D SF +W V
Sbjct: 55 DGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIQTWFQNV 108
>gi|417396991|gb|JAA45529.1| Putative gtp-binding protein [Desmodus rotundus]
Length = 201
Score = 93.2 bits (230), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 81/156 (51%), Gaps = 8/156 (5%)
Query: 34 GAQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKA 93
G + ++ F+ ++F ++ + V K E GE+V+L +WDTAGQE F IT
Sbjct: 20 GKSSLLLRFAD---NTFSGSYITTIGVDFKIRTVEINGEKVKLQIWDTAGQERFRTITST 76
Query: 94 YYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGEIPTVLVQNKIDLLDQSVVAPEEAD 153
YYRG ++ + +SF W ++ C ++ +LV NK D ++ VV E+A
Sbjct: 77 YYRGTHGVIVVYDVTSAESFVNVKRWLHEINQNCDDVCRILVGNKNDDPERKVVETEDAY 136
Query: 154 LLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSEL 189
+ +G +L TS KE++NV +F C++EL
Sbjct: 137 KFAGQMGIQLFETSAKENVNVEEMF-----NCITEL 167
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 28/49 (57%)
Query: 8 GEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
GE+V+L +WDTAGQE F IT YYRG ++ + +SF W
Sbjct: 54 GEKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRW 102
>gi|154294011|ref|XP_001547449.1| secretion related Rab/GTPase [Botryotinia fuckeliana B05.10]
gi|347841066|emb|CCD55638.1| similar to GTP-binding protein [Botryotinia fuckeliana]
Length = 203
Score = 93.2 bits (230), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 80/169 (47%), Gaps = 9/169 (5%)
Query: 19 AGQEEFDAITKAYYRGAQA-----CVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEE 73
AG +D + K G C++ FS DSF + + + K E +G+
Sbjct: 2 AGTRNYDFLIKLLLIGDSGVGKSCCLLRFS---EDSFTPSFITTIGIDFKIRTIELDGKR 58
Query: 74 VRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGE-IPT 132
V+L +WDTAGQE F IT AYYRGA ++ + D SF +W VE E +
Sbjct: 59 VKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFTNIRTWFSNVEQHATEGVNK 118
Query: 133 VLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYL 181
+L+ NK D D+ VV+ E L+ LG + S K +INV F L
Sbjct: 119 ILIGNKCDWEDKRVVSTERGQQLADELGIPFLEVSAKSNINVEKAFYSL 167
>gi|410976786|ref|XP_003994794.1| PREDICTED: ras-related protein Rab-35 [Felis catus]
Length = 185
Score = 93.2 bits (230), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 75/142 (52%), Gaps = 5/142 (3%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
++F ++ + V K E GE+V+L +WDTAGQE F IT YYRG ++ +
Sbjct: 15 NTFSGSYITTIGVDFKIRTVEINGEKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDV 74
Query: 108 IDRDSFEAAHSWKMKVENECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTS 167
+SF W ++ C ++ +LV NK D ++ VV E+A + +G +L TS
Sbjct: 75 TSAESFVNVKRWLHEINQNCDDVCRILVGNKNDDPERKVVETEDAYKFAGQMGIQLFETS 134
Query: 168 VKEDINVNSIFRYLTTKCLSEL 189
KE++NV +F C++EL
Sbjct: 135 AKENVNVEEMF-----NCITEL 151
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 28/49 (57%)
Query: 8 GEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
GE+V+L +WDTAGQE F IT YYRG ++ + +SF W
Sbjct: 38 GEKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRW 86
>gi|54696902|gb|AAV38823.1| RAB35, member RAS oncogene family [synthetic construct]
gi|54696908|gb|AAV38826.1| RAB35, member RAS oncogene family [synthetic construct]
gi|60830162|gb|AAX36914.1| RAB35 member RAS oncogene family [synthetic construct]
gi|61365974|gb|AAX42793.1| RAB35 member RAS oncogene family [synthetic construct]
gi|61365979|gb|AAX42794.1| RAB35 member RAS oncogene family [synthetic construct]
gi|61370750|gb|AAX43546.1| RAB35 member RAS oncogene family [synthetic construct]
Length = 202
Score = 92.8 bits (229), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 81/156 (51%), Gaps = 8/156 (5%)
Query: 34 GAQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKA 93
G + ++ F+ ++F ++ + V K E GE+V+L +WDTAGQE F IT
Sbjct: 20 GKSSLLLRFAD---NTFSGSYITTIGVDFKIRTVEINGEKVKLQIWDTAGQERFRTITST 76
Query: 94 YYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGEIPTVLVQNKIDLLDQSVVAPEEAD 153
YYRG ++ + +SF W ++ C ++ +LV NK D ++ VV E+A
Sbjct: 77 YYRGTHGVIVVYDVTSAESFVNVKRWLHEINQNCDDVCRILVGNKNDDPERKVVETEDAY 136
Query: 154 LLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSEL 189
+ +G +L TS KE++NV +F C++EL
Sbjct: 137 KFAGQMGIQLFETSAKENVNVEEMF-----NCITEL 167
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 28/49 (57%)
Query: 8 GEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
GE+V+L +WDTAGQE F IT YYRG ++ + +SF W
Sbjct: 54 GEKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRW 102
>gi|297693159|ref|XP_002823893.1| PREDICTED: ras-related protein Rab-35 [Pongo abelii]
Length = 201
Score = 92.8 bits (229), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 75/142 (52%), Gaps = 5/142 (3%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
++F ++ + V K E GE+V+L +WDTAGQE F IT YYRG ++ +
Sbjct: 31 NTFSGSYITTIGVDFKIRTVEINGEKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDV 90
Query: 108 IDRDSFEAAHSWKMKVENECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTS 167
+SF W ++ C ++ +LV NK D ++ VV E+A + +G +L TS
Sbjct: 91 TSAESFVNVKRWLHEINQNCDDVCRILVGNKNDDPERKVVETEDAYKFAAQMGIQLFETS 150
Query: 168 VKEDINVNSIFRYLTTKCLSEL 189
KE++NV +F C++EL
Sbjct: 151 AKENVNVEEMF-----NCITEL 167
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 28/49 (57%)
Query: 8 GEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
GE+V+L +WDTAGQE F IT YYRG ++ + +SF W
Sbjct: 54 GEKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRW 102
>gi|403281829|ref|XP_003932377.1| PREDICTED: ras-related protein Rab-35 [Saimiri boliviensis
boliviensis]
Length = 256
Score = 92.8 bits (229), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 75/142 (52%), Gaps = 5/142 (3%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
++F ++ + V K E GE+V+L +WDTAGQE F IT YYRG ++ +
Sbjct: 86 NTFSGSYITTIGVDFKIRTVEINGEKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDV 145
Query: 108 IDRDSFEAAHSWKMKVENECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTS 167
+SF W ++ C ++ +LV NK D ++ VV E+A + +G +L TS
Sbjct: 146 TSAESFVNVKRWLHEINQNCDDVCRILVGNKNDDPERKVVETEDAYKFAGQMGIQLFETS 205
Query: 168 VKEDINVNSIFRYLTTKCLSEL 189
KE++NV +F C++EL
Sbjct: 206 AKENVNVEEMF-----NCITEL 222
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 28/49 (57%)
Query: 8 GEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
GE+V+L +WDTAGQE F IT YYRG ++ + +SF W
Sbjct: 109 GEKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRW 157
>gi|432092844|gb|ELK25210.1| Ras-related protein Rab-35 [Myotis davidii]
Length = 204
Score = 92.8 bits (229), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 75/142 (52%), Gaps = 5/142 (3%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
++F ++ + V K E GE+V+L +WDTAGQE F IT YYRG ++ +
Sbjct: 34 NTFSGSYITTIGVDFKIRTVEINGEKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDV 93
Query: 108 IDRDSFEAAHSWKMKVENECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTS 167
+SF W ++ C ++ +LV NK D ++ VV E+A + +G +L TS
Sbjct: 94 TSAESFVNVKRWLHEINQNCDDVCRILVGNKNDDPERKVVETEDAYKFAGQMGIQLFETS 153
Query: 168 VKEDINVNSIFRYLTTKCLSEL 189
KE++NV +F C++EL
Sbjct: 154 AKENVNVEEMF-----NCITEL 170
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 28/49 (57%)
Query: 8 GEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
GE+V+L +WDTAGQE F IT YYRG ++ + +SF W
Sbjct: 57 GEKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRW 105
>gi|5803135|ref|NP_006852.1| ras-related protein Rab-35 isoform 1 [Homo sapiens]
gi|37718983|ref|NP_937806.1| ras-related protein Rab-35 [Mus musculus]
gi|61556789|ref|NP_001013064.1| ras-related protein Rab-35 [Rattus norvegicus]
gi|148229407|ref|NP_001091596.1| ras-related protein Rab-35 [Bos taurus]
gi|302565752|ref|NP_001181695.1| ras-related protein Rab-35 [Macaca mulatta]
gi|343168793|ref|NP_001230220.1| ras-related protein Rab-35 [Sus scrofa]
gi|332840547|ref|XP_003314008.1| PREDICTED: ras-related protein Rab-35 isoform 1 [Pan troglodytes]
gi|390468242|ref|XP_002753117.2| PREDICTED: ras-related protein Rab-35 [Callithrix jacchus]
gi|3024525|sp|Q15286.1|RAB35_HUMAN RecName: Full=Ras-related protein Rab-35; AltName: Full=GTP-binding
protein RAY; AltName: Full=Ras-related protein Rab-1C
gi|62900797|sp|Q5U316.1|RAB35_RAT RecName: Full=Ras-related protein Rab-35
gi|62901088|sp|Q6PHN9.1|RAB35_MOUSE RecName: Full=Ras-related protein Rab-35
gi|20379096|gb|AAM21108.1|AF498960_1 small GTP binding protein RAB35 [Homo sapiens]
gi|763122|emb|CAA56177.1| ray [Homo sapiens]
gi|3970972|gb|AAC83182.1| GTP-binding protein H-ray [Homo sapiens]
gi|16198501|gb|AAH15931.1| RAB35, member RAS oncogene family [Homo sapiens]
gi|33990612|gb|AAH56466.1| RAB35, member RAS oncogene family [Mus musculus]
gi|49168460|emb|CAG38725.1| RAB35 [Homo sapiens]
gi|49456327|emb|CAG46484.1| RAB35 [Homo sapiens]
gi|54696910|gb|AAV38827.1| RAB35, member RAS oncogene family [Homo sapiens]
gi|55250410|gb|AAH85769.1| RAB35, member RAS oncogene family [Rattus norvegicus]
gi|60818474|gb|AAX36466.1| RAB35 member RAS oncogene family [synthetic construct]
gi|61356141|gb|AAX41213.1| RAB35 member RAS oncogene family [synthetic construct]
gi|61361052|gb|AAX41980.1| RAB35 member RAS oncogene family [synthetic construct]
gi|61362982|gb|AAX42313.1| RAB35 member RAS oncogene family [synthetic construct]
gi|74140038|dbj|BAE33762.1| unnamed protein product [Mus musculus]
gi|112293031|dbj|BAF02893.1| Rab35 [Mus musculus]
gi|119618569|gb|EAW98163.1| RAB35, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|123994149|gb|ABM84676.1| RAB35, member RAS oncogene family [synthetic construct]
gi|124126861|gb|ABM92203.1| RAB35, member RAS oncogene family [synthetic construct]
gi|124126895|gb|ABM92220.1| RAB35, member RAS oncogene family [synthetic construct]
gi|146186509|gb|AAI40522.1| RAB35 protein [Bos taurus]
gi|148687899|gb|EDL19846.1| RAB35, member RAS oncogene family [Mus musculus]
gi|149063543|gb|EDM13866.1| rCG21356 [Rattus norvegicus]
gi|189069099|dbj|BAG35437.1| unnamed protein product [Homo sapiens]
gi|261860342|dbj|BAI46693.1| RAB35, member RAS oncogene family [synthetic construct]
gi|380784769|gb|AFE64260.1| ras-related protein Rab-35 isoform 1 [Macaca mulatta]
gi|383415401|gb|AFH30914.1| ras-related protein Rab-35 isoform 1 [Macaca mulatta]
gi|384942608|gb|AFI34909.1| ras-related protein Rab-35 isoform 1 [Macaca mulatta]
Length = 201
Score = 92.8 bits (229), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 75/142 (52%), Gaps = 5/142 (3%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
++F ++ + V K E GE+V+L +WDTAGQE F IT YYRG ++ +
Sbjct: 31 NTFSGSYITTIGVDFKIRTVEINGEKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDV 90
Query: 108 IDRDSFEAAHSWKMKVENECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTS 167
+SF W ++ C ++ +LV NK D ++ VV E+A + +G +L TS
Sbjct: 91 TSAESFVNVKRWLHEINQNCDDVCRILVGNKNDDPERKVVETEDAYKFAGQMGIQLFETS 150
Query: 168 VKEDINVNSIFRYLTTKCLSEL 189
KE++NV +F C++EL
Sbjct: 151 AKENVNVEEMF-----NCITEL 167
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 28/49 (57%)
Query: 8 GEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
GE+V+L +WDTAGQE F IT YYRG ++ + +SF W
Sbjct: 54 GEKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRW 102
>gi|359322950|ref|XP_854240.3| PREDICTED: ras-related protein Rab-35 isoform 2 [Canis lupus
familiaris]
Length = 201
Score = 92.8 bits (229), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 75/142 (52%), Gaps = 5/142 (3%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
++F ++ + V K E GE+V+L +WDTAGQE F IT YYRG ++ +
Sbjct: 31 NTFSGSYITTIGVDFKIRTVEINGEKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDV 90
Query: 108 IDRDSFEAAHSWKMKVENECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTS 167
+SF W ++ C ++ +LV NK D ++ VV E+A + +G +L TS
Sbjct: 91 TSAESFVNVKRWLHEINQNCDDVCRILVGNKNDDPERKVVETEDAYKFAGQMGIQLFETS 150
Query: 168 VKEDINVNSIFRYLTTKCLSEL 189
KE++NV +F C++EL
Sbjct: 151 AKENVNVEEMF-----NCITEL 167
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 28/49 (57%)
Query: 8 GEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
GE+V+L +WDTAGQE F IT YYRG ++ + +SF W
Sbjct: 54 GEKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRW 102
>gi|296478535|tpg|DAA20650.1| TPA: RAB35, member RAS oncogene family [Bos taurus]
Length = 201
Score = 92.8 bits (229), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 75/142 (52%), Gaps = 5/142 (3%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
++F ++ + V K E GE+V+L +WDTAGQE F IT YYRG ++ +
Sbjct: 31 NTFSGSYITTIGVDFKIRTVEINGEKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDV 90
Query: 108 IDRDSFEAAHSWKMKVENECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTS 167
+SF W ++ C ++ +LV NK D ++ VV E+A + +G +L TS
Sbjct: 91 TSAESFVNVKRWLHEINQNCDDVCRILVGNKNDDPERKVVETEDAYKFAGQMGIQLFETS 150
Query: 168 VKEDINVNSIFRYLTTKCLSEL 189
KE++NV +F C++EL
Sbjct: 151 AKENVNVEEMF-----NCITEL 167
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 28/49 (57%)
Query: 8 GEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
GE+V+L +WDTAGQE F IT YYRG ++ + +SF W
Sbjct: 54 GEKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRW 102
>gi|60824864|gb|AAX36697.1| RAB35 member RAS oncogene family [synthetic construct]
Length = 202
Score = 92.8 bits (229), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 81/156 (51%), Gaps = 8/156 (5%)
Query: 34 GAQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKA 93
G + ++ F+ ++F ++ + V K E GE+V+L +WDTAGQE F IT
Sbjct: 20 GKSSLLLRFAD---NTFSGSYITTIGVDFKIRTVEINGEKVKLQIWDTAGQERFRTITST 76
Query: 94 YYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGEIPTVLVQNKIDLLDQSVVAPEEAD 153
YYRG ++ + +SF W ++ C ++ +LV NK D ++ VV E+A
Sbjct: 77 YYRGTHGVIVVYDVTSAESFVNVKRWLHEINQNCDDVCRILVGNKNDDPERKVVETEDAY 136
Query: 154 LLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSEL 189
+ +G +L TS KE++NV +F C++EL
Sbjct: 137 KFAGQMGIQLFETSAKENVNVEEMF-----NCITEL 167
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 28/49 (57%)
Query: 8 GEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
GE+V+L +WDTAGQE F IT YYRG ++ + +SF W
Sbjct: 54 GEKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRW 102
>gi|395514073|ref|XP_003761245.1| PREDICTED: ras-related protein Rab-35 [Sarcophilus harrisii]
Length = 229
Score = 92.8 bits (229), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 75/142 (52%), Gaps = 5/142 (3%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
++F ++ + V K E GE+V+L +WDTAGQE F IT YYRG ++ +
Sbjct: 59 NTFSGSYITTIGVDFKIRTVEINGEKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDV 118
Query: 108 IDRDSFEAAHSWKMKVENECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTS 167
+SF W ++ C ++ +LV NK D ++ VV E+A + +G +L TS
Sbjct: 119 TSAESFVNVKRWLHEINQNCDDVCRILVGNKNDDPERKVVETEDAYKFAGQMGIQLFETS 178
Query: 168 VKEDINVNSIFRYLTTKCLSEL 189
KE++NV +F C++EL
Sbjct: 179 AKENVNVEEMF-----NCITEL 195
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 28/49 (57%)
Query: 8 GEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
GE+V+L +WDTAGQE F IT YYRG ++ + +SF W
Sbjct: 82 GEKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRW 130
>gi|310792151|gb|EFQ27678.1| Ras family protein [Glomerella graminicola M1.001]
Length = 202
Score = 92.8 bits (229), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 83/170 (48%), Gaps = 6/170 (3%)
Query: 34 GAQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKA 93
G C++ FS DSF + + + K E +G+ V+L +WDTAGQE F IT A
Sbjct: 22 GKSCCLLRFS---EDSFTPSFITTIGIDFKIRTIELDGKRVKLQIWDTAGQERFRTITTA 78
Query: 94 YYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEA 152
YYRGA ++ + D SF +W VE E + +L+ NK D ++ VV+ E
Sbjct: 79 YYRGAMGILLVYDVTDERSFNNIRTWFANVEQHATEGVNKILIGNKCDWEEKRVVSTERG 138
Query: 153 DLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSEL--RQQEEEYSING 200
L+ LG + S K +IN++ F L L Q+ E+ + +G
Sbjct: 139 QQLADELGIPFLEVSAKSNINIDKAFYSLAADIKKRLIDNQKNEQPAASG 188
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 32/54 (59%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 60
+G+ V+L +WDTAGQE F IT AYYRGA ++ + D SF +W V
Sbjct: 55 DGKRVKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRTWFANV 108
>gi|417408833|gb|JAA50952.1| Putative rab subfamily protein of small gtpase, partial [Desmodus
rotundus]
Length = 228
Score = 92.8 bits (229), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 78/154 (50%), Gaps = 4/154 (2%)
Query: 34 GAQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKA 93
G +I F+ D+F + + + K + +G++++L +WDTAGQE F IT A
Sbjct: 45 GKTCLIIRFA---EDNFNNTYISTIGIDFKIRTVDIDGKKIKLQVWDTAGQERFKTITTA 101
Query: 94 YYRGAQACVITFSTIDRDSFEAAHSWKMKV-ENECGEIPTVLVQNKIDLLDQSVVAPEEA 152
YYRGA ++ + D SFE +W + EN + +L+ NK D+ + V E+A
Sbjct: 102 YYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCDMEAKRKVQKEQA 161
Query: 153 DLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCL 186
D L+R G R TS K +NV+ F L L
Sbjct: 162 DKLAREHGIRFFETSAKSSMNVDEAFSSLARDIL 195
>gi|403362358|gb|EJY80906.1| Ras-related gtp-binding protein [Oxytricha trifallax]
Length = 224
Score = 92.8 bits (229), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 79/148 (53%), Gaps = 2/148 (1%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
D+F ++H + + K +G+ V+L +WDTAGQE F IT+ YY+GA ++ +
Sbjct: 34 DNFTSSHISTIGIDFKIKTINIDGKNVKLQIWDTAGQERFRTITQTYYKGAMGIILAYDC 93
Query: 108 IDRDSFEAAHSWKMKVE-NECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
DSF +W ++E + + +L+ NK DL D+ V+ E+ L++ + T
Sbjct: 94 TSEDSFNNVRNWVRQIEVHASSNVEKILIGNKADLTDKKVIDTEQGMALAKEFNMKFFET 153
Query: 167 SVKEDINVNSIFRYLTTKCLSELRQQEE 194
S + NVN F + +KC+ + +Q+ +
Sbjct: 154 SARTGHNVNETF-FEISKCIKDKQQKAQ 180
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 34/56 (60%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVSI 62
+G+ V+L +WDTAGQE F IT+ YY+GA ++ + DSF +W ++ +
Sbjct: 56 DGKNVKLQIWDTAGQERFRTITQTYYKGAMGIILAYDCTSEDSFNNVRNWVRQIEV 111
>gi|380494610|emb|CCF33020.1| Ras-like protein Rab-8A [Colletotrichum higginsianum]
Length = 202
Score = 92.8 bits (229), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 83/170 (48%), Gaps = 6/170 (3%)
Query: 34 GAQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKA 93
G C++ FS DSF + + + K E +G+ V+L +WDTAGQE F IT A
Sbjct: 22 GKSCCLLRFS---EDSFTPSFITTIGIDFKIRTIELDGKRVKLQIWDTAGQERFRTITTA 78
Query: 94 YYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEA 152
YYRGA ++ + D SF +W VE E + +L+ NK D ++ VV+ E
Sbjct: 79 YYRGAMGILLVYDVTDERSFNNIRTWFANVEQHATEGVNKILIGNKCDWEEKRVVSTERG 138
Query: 153 DLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSEL--RQQEEEYSING 200
L+ LG + S K +IN++ F L L Q+ E+ + +G
Sbjct: 139 QQLADELGIPFLEVSAKSNINIDKAFYSLAADIKKRLIDNQKNEQPAASG 188
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 32/54 (59%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 60
+G+ V+L +WDTAGQE F IT AYYRGA ++ + D SF +W V
Sbjct: 55 DGKRVKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRTWFANV 108
>gi|3452213|gb|AAC32772.1| small G-protein [Trypanosoma brucei]
gi|38224680|gb|AAR14148.1| Rab23 [Trypanosoma brucei]
Length = 226
Score = 92.8 bits (229), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 48/115 (41%), Positives = 60/115 (52%)
Query: 74 VRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGEIPTV 133
V LWDTAGQE ++ YY A ++ FST +SF WK VE CG IP V
Sbjct: 60 VNSFLWDTAGQETVSSVKDIYYLDAAVAILVFSTDSSESFARIEMWKRCVERVCGSIPMV 119
Query: 134 LVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSE 188
L Q K DL Q+ V EE + L+ L L R S K+ NV +F Y+ C+SE
Sbjct: 120 LCQTKFDLARQAAVVAEEVEKLAVKLQLPLFRVSTKDGFNVTQLFEYVAAMCVSE 174
Score = 42.0 bits (97), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 24/47 (51%)
Query: 11 VRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWK 57
V LWDTAGQE ++ YY A ++ FST +SF WK
Sbjct: 60 VNSFLWDTAGQETVSSVKDIYYLDAAVAILVFSTDSSESFARIEMWK 106
>gi|14475537|emb|CAC41973.1| putative Rab/GTPase [Glomerella lindemuthiana]
Length = 202
Score = 92.8 bits (229), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 83/170 (48%), Gaps = 6/170 (3%)
Query: 34 GAQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKA 93
G C++ FS DSF + + + K E +G+ V+L +WDTAGQE F IT A
Sbjct: 22 GKSCCLLRFS---EDSFTPSFITTIGIDFKIRTIELDGKRVKLQIWDTAGQERFRTITTA 78
Query: 94 YYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEA 152
YYRGA ++ + D SF +W VE E + +L+ NK D ++ VV+ E
Sbjct: 79 YYRGAMGILLVYDVTDERSFNNIRTWFANVEQHATEGVNKILIGNKCDWEEKRVVSTERG 138
Query: 153 DLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSEL--RQQEEEYSING 200
L+ LG + S K +IN++ F L L Q+ E+ + +G
Sbjct: 139 QQLADELGIPFLEVSAKSNINIDKAFYSLAADIKKRLIDNQKNEQPAASG 188
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 32/54 (59%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 60
+G+ V+L +WDTAGQE F IT AYYRGA ++ + D SF +W V
Sbjct: 55 DGKRVKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRTWFANV 108
>gi|387017944|gb|AFJ51090.1| ras-related protein Rab-8A [Crotalus adamanteus]
Length = 207
Score = 92.8 bits (229), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 84/155 (54%), Gaps = 1/155 (0%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
D+F A + + K E +G++++L +WDTAGQE F IT AYYRGA ++ +
Sbjct: 31 DAFNATFISTIGIDFKIRTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDI 90
Query: 108 IDRDSFEAAHSWKMKVENECG-EIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
+ SFE +W +E ++ +++ NK D+ + V+ E+ + L+ + G + M T
Sbjct: 91 TNEKSFENIQNWVRNIEEHASPDVEKMILGNKCDITHKRQVSREQGEKLAISFGIKFMET 150
Query: 167 SVKEDINVNSIFRYLTTKCLSELRQQEEEYSINGN 201
S K +IN+++ F L +++ ++ E S GN
Sbjct: 151 SAKANINIDNAFFTLARDIKAKIDKKLEGNSPQGN 185
>gi|294942675|ref|XP_002783640.1| rab6, putative [Perkinsus marinus ATCC 50983]
gi|239896142|gb|EER15436.1| rab6, putative [Perkinsus marinus ATCC 50983]
Length = 392
Score = 92.8 bits (229), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 47/110 (42%), Positives = 63/110 (57%), Gaps = 1/110 (0%)
Query: 70 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGE 129
+G V+L LWDTAGQE F ++ AY R ACV+ F +SF + SW +VE+E G
Sbjct: 240 DGRSVKLQLWDTAGQERFRSLIPAYLRDTAACVVVFDLTSEESFNSVRSWMSQVEDEKGS 299
Query: 130 -IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIF 178
+ VLV NK D+ D V+ EEA L+ LG R TS K +++ IF
Sbjct: 300 GVKIVLVGNKADMADSRQVSGEEARALAGELGVRYFETSAKSGVDIEQIF 349
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 33/56 (58%)
Query: 5 ICEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 60
+ +G V+L LWDTAGQE F ++ AY R ACV+ F +SF + SW +V
Sbjct: 238 LDDGRSVKLQLWDTAGQERFRSLIPAYLRDTAACVVVFDLTSEESFNSVRSWMSQV 293
>gi|345316878|ref|XP_001520246.2| PREDICTED: ras-related protein Rab-8B-like [Ornithorhynchus
anatinus]
Length = 281
Score = 92.4 bits (228), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 91/171 (53%), Gaps = 13/171 (7%)
Query: 46 DRDSFEAAHSWKM----------KVSIK-RTIKECEGEEVRLMLWDTAGQEEFDAITKAY 94
D SF +++W M ++ K RTI E +G++++L +WDTAGQE F IT AY
Sbjct: 93 DFTSFNESYNWDMARGGFWRFNQRIDFKIRTI-ELDGKKIKLQIWDTAGQERFRTITTAY 151
Query: 95 YRGAQACVITFSTIDRDSFEAAHSWKMKV-ENECGEIPTVLVQNKIDLLDQSVVAPEEAD 153
YRGA ++ + + SF+ +W + E+ ++ +++ NK D+ D+ V+ E +
Sbjct: 152 YRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCDMNDKRQVSKERGE 211
Query: 154 LLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSELRQQEEEYSINGNGLP 204
L+ G + + TS K INV F L +++L ++ + S +G G P
Sbjct: 212 KLAIDYGIKFLETSAKSSINVEEAFFTLARDIMTKLNRKMNDSSSSGAGGP 262
>gi|440909544|gb|ELR59443.1| Ras-related protein Rab-35, partial [Bos grunniens mutus]
Length = 200
Score = 92.4 bits (228), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 75/142 (52%), Gaps = 5/142 (3%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
++F ++ + V K E GE+V+L +WDTAGQE F IT YYRG ++ +
Sbjct: 30 NTFSGSYITTIGVDFKIRTVEINGEKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDV 89
Query: 108 IDRDSFEAAHSWKMKVENECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTS 167
+SF W ++ C ++ +LV NK D ++ VV E+A + +G +L TS
Sbjct: 90 TSAESFVNVKRWLHEINQNCDDVCRILVGNKNDDPERKVVETEDAYKFAGQMGIQLFETS 149
Query: 168 VKEDINVNSIFRYLTTKCLSEL 189
KE++NV +F C++EL
Sbjct: 150 AKENVNVEEMF-----NCITEL 166
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 28/49 (57%)
Query: 8 GEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
GE+V+L +WDTAGQE F IT YYRG ++ + +SF W
Sbjct: 53 GEKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRW 101
>gi|452839356|gb|EME41295.1| hypothetical protein DOTSEDRAFT_73639 [Dothistroma septosporum
NZE10]
Length = 207
Score = 92.4 bits (228), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 80/169 (47%), Gaps = 9/169 (5%)
Query: 19 AGQEEFDAITKAYY-----RGAQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEE 73
AG +D + K G C++ FS DSF + + + K E +G+
Sbjct: 2 AGTRNYDFLIKLLLIGDSGVGKSCCLLRFS---EDSFTPSFITTIGIDFKIRTIELDGKR 58
Query: 74 VRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGE-IPT 132
V+L +WDTAGQE F IT AYYRGA ++ + D SF +W VE E +
Sbjct: 59 VKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDEKSFNNIRTWFSNVEQHATEGVNK 118
Query: 133 VLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYL 181
+L+ NK D ++ V+ E+ L+ LG M S K +INV F L
Sbjct: 119 ILIGNKCDWEEKRAVSTEQGQALADELGIPFMEVSAKSNINVEKAFYSL 167
>gi|212535970|ref|XP_002148141.1| Rab GTPase SrgA, putative [Talaromyces marneffei ATCC 18224]
gi|210070540|gb|EEA24630.1| Rab GTPase SrgA, putative [Talaromyces marneffei ATCC 18224]
Length = 206
Score = 92.4 bits (228), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 82/171 (47%), Gaps = 9/171 (5%)
Query: 19 AGQEEFDAITKAYYRGAQA-----CVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEE 73
AG +D + K G C++ FS DSF + + + K E +G+
Sbjct: 2 AGTRNYDFLIKLLLIGDSGVGKSCCLLRFS---EDSFTPSFITTIGIDFKIRTIELDGKR 58
Query: 74 VRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGE-IPT 132
V+L +WDTAGQE F IT AYYRGA ++ + D SF +W VE E +
Sbjct: 59 VKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRTWFSNVEQHASEGVHK 118
Query: 133 VLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLTT 183
+L+ NK D ++ V+ E+ L+ LG + S K +INV+ F L +
Sbjct: 119 ILIGNKCDWEEKRAVSTEQGQKLADELGIPFLEVSAKNNINVDKAFYSLAS 169
>gi|332261926|ref|XP_003280016.1| PREDICTED: ras-related protein Rab-35 [Nomascus leucogenys]
Length = 211
Score = 92.4 bits (228), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 75/142 (52%), Gaps = 5/142 (3%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
++F ++ + V K E GE+V+L +WDTAGQE F IT YYRG ++ +
Sbjct: 41 NTFSGSYITTIGVDFKIRTVEINGEKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDV 100
Query: 108 IDRDSFEAAHSWKMKVENECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTS 167
+SF W ++ C ++ +LV NK D ++ VV E+A + +G +L TS
Sbjct: 101 TSAESFVNVKRWLHEINQNCDDVCRILVGNKNDDPERKVVETEDAYKFAGQMGIQLFETS 160
Query: 168 VKEDINVNSIFRYLTTKCLSEL 189
KE++NV +F C++EL
Sbjct: 161 AKENVNVEEMF-----NCITEL 177
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 28/49 (57%)
Query: 8 GEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
GE+V+L +WDTAGQE F IT YYRG ++ + +SF W
Sbjct: 64 GEKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRW 112
>gi|403216653|emb|CCK71149.1| hypothetical protein KNAG_0G00930 [Kazachstania naganishii CBS
8797]
Length = 213
Score = 92.4 bits (228), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 87/169 (51%), Gaps = 8/169 (4%)
Query: 19 AGQEEFDAITKAYYRG----AQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEV 74
+G + +D+I K G ++C++ DR F + + + K + G++V
Sbjct: 10 SGGKNYDSIMKILLVGDSGVGKSCLLVRFVEDR--FNPSFITTIGIDFKIKTVDINGKKV 67
Query: 75 RLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV-ENECGEIPTV 133
+L LWDTAGQE F IT AYYRGA ++ + D +F W V E+ + +
Sbjct: 68 KLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFNNIRQWFTTVTEHANDDAQLL 127
Query: 134 LVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLT 182
LV NK D +D VV+ E+ + L+ LG + +S K+D NVN IF LT
Sbjct: 128 LVGNKSD-MDTRVVSREQGETLAAELGLPFVESSAKDDDNVNEIFFTLT 175
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 39/72 (54%), Gaps = 6/72 (8%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVSIKRTI 66
G++V+L LWDTAGQE F IT AYYRGA ++ + D +F W T+
Sbjct: 63 NGKKVKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFNNIRQWFT------TV 116
Query: 67 KECEGEEVRLML 78
E ++ +L+L
Sbjct: 117 TEHANDDAQLLL 128
>gi|196010960|ref|XP_002115344.1| hypothetical protein TRIADDRAFT_29233 [Trichoplax adhaerens]
gi|190582115|gb|EDV22189.1| hypothetical protein TRIADDRAFT_29233 [Trichoplax adhaerens]
Length = 207
Score = 92.4 bits (228), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 74/138 (53%), Gaps = 2/138 (1%)
Query: 50 FEAAHSWKMKVSIK-RTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTI 108
F+ + + V K RTI E +G+ ++L +WDTAGQE F IT YYRG ++ +
Sbjct: 34 FQGTYITTIGVDFKIRTI-EVDGQRIKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVT 92
Query: 109 DRDSFEAAHSWKMKVENECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSV 168
++F W M+++ C VLV NK D LD+ +V+ +A + +G +L S
Sbjct: 93 SGETFVNVKRWLMEIDQNCEVANRVLVGNKCDCLDKKLVSTADAKKFAEQMGIQLFEASA 152
Query: 169 KEDINVNSIFRYLTTKCL 186
K++IN+ +F +T L
Sbjct: 153 KDNINIEDVFTAITKLVL 170
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 31/54 (57%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 60
+G+ ++L +WDTAGQE F IT YYRG ++ + ++F W M++
Sbjct: 54 DGQRIKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSGETFVNVKRWLMEI 107
>gi|47217560|emb|CAG02487.1| unnamed protein product [Tetraodon nigroviridis]
Length = 206
Score = 92.4 bits (228), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 72/142 (50%), Gaps = 5/142 (3%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
++F ++ + V K E GE+V+L +WDTAGQE F IT YYRG ++ +
Sbjct: 36 NTFSGSYITTIGVDFKIRTVEINGEKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDV 95
Query: 108 IDRDSFEAAHSWKMKVENECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTS 167
+SF W ++ C ++ +LV NK D + VV +A + +G L TS
Sbjct: 96 TSAESFVNVKRWLHEINQNCDDVCRILVGNKNDDPNSKVVETTDAQKFAEQMGINLFETS 155
Query: 168 VKEDINVNSIFRYLTTKCLSEL 189
KE+INV +F C++EL
Sbjct: 156 AKENINVEEMF-----NCITEL 172
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 28/49 (57%)
Query: 8 GEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
GE+V+L +WDTAGQE F IT YYRG ++ + +SF W
Sbjct: 59 GEKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRW 107
>gi|397525482|ref|XP_003832695.1| PREDICTED: ras-related protein Rab-35 [Pan paniscus]
Length = 311
Score = 92.4 bits (228), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 75/142 (52%), Gaps = 5/142 (3%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
++F ++ + V K E GE+V+L +WDTAGQE F IT YYRG ++ +
Sbjct: 141 NTFSGSYITTIGVDFKIRTVEINGEKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDV 200
Query: 108 IDRDSFEAAHSWKMKVENECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTS 167
+SF W ++ C ++ +LV NK D ++ VV E+A + +G +L TS
Sbjct: 201 TSAESFVNVKRWLHEINQNCDDVCRILVGNKNDDPERKVVETEDAYKFAGQMGIQLFETS 260
Query: 168 VKEDINVNSIFRYLTTKCLSEL 189
KE++NV +F C++EL
Sbjct: 261 AKENVNVEEMF-----NCITEL 277
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 28/49 (57%)
Query: 8 GEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
GE+V+L +WDTAGQE F IT YYRG ++ + +SF W
Sbjct: 164 GEKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRW 212
>gi|348584444|ref|XP_003477982.1| PREDICTED: ras-related protein Rab-35-like [Cavia porcellus]
Length = 268
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 83/160 (51%), Gaps = 8/160 (5%)
Query: 33 RGAQACVITFSTIDR---DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDA 89
R A+A V S + R ++F ++ + V K E GE+V+L +WDTAGQE F
Sbjct: 80 RYARASVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKVKLQIWDTAGQERFRT 139
Query: 90 ITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGEIPTVLVQNKIDLLDQSVVAP 149
IT YYRG ++ + +SF W ++ C ++ +LV NK D ++ VV
Sbjct: 140 ITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEINQNCDDVCRILVGNKNDDPERKVVET 199
Query: 150 EEADLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSEL 189
E+A + +G +L TS KE++NV +F C++EL
Sbjct: 200 EDAYKFAGQMGIQLFETSAKENVNVEEMF-----NCITEL 234
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 28/49 (57%)
Query: 8 GEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
GE+V+L +WDTAGQE F IT YYRG ++ + +SF W
Sbjct: 121 GEKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRW 169
>gi|242089159|ref|XP_002440412.1| hypothetical protein SORBIDRAFT_09g000550 [Sorghum bicolor]
gi|241945697|gb|EES18842.1| hypothetical protein SORBIDRAFT_09g000550 [Sorghum bicolor]
Length = 205
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/146 (34%), Positives = 77/146 (52%), Gaps = 1/146 (0%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
DSF + + V K + +G+ V+L +WDTAGQE F IT +YYRGA +I +
Sbjct: 33 DSFVDTYISTIGVDFKIRTVDLDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDV 92
Query: 108 IDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
D +SF W +++ + + +LV NK DL+D VV E+A + +LG + T
Sbjct: 93 TDMESFNNIKQWLSEIDRYASDNVCKLLVGNKCDLVDSKVVETEKAKAFADSLGIPFIET 152
Query: 167 SVKEDINVNSIFRYLTTKCLSELRQQ 192
S KE INV F ++++ + Q
Sbjct: 153 SAKESINVEEAFLTMSSEIKKRMATQ 178
>gi|402079275|gb|EJT74540.1| GTP-binding protein ypt2 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 203
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 85/184 (46%), Gaps = 9/184 (4%)
Query: 19 AGQEEFDAITKAYYRGAQA-----CVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEE 73
+G +D + K G C++ FS DSF + + + K E +G+
Sbjct: 2 SGNRNYDVLIKLLLIGDSGVGKSCCLLRFS---EDSFTPSFITTIGIDFKIRTIELDGKR 58
Query: 74 VRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGE-IPT 132
V+L +WDTAGQE F IT AYYRGA ++ + D SF +W VE E +
Sbjct: 59 VKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRTWFANVEQHASEGVNK 118
Query: 133 VLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSELRQQ 192
+L+ NK D ++ V+ E+ L+ LG + S K +IN++ F L +
Sbjct: 119 ILIGNKCDWEEKRAVSTEQGQALADELGIPFLEVSAKGNINIDKAFYSLASDIKKRTIDT 178
Query: 193 EEEY 196
+EY
Sbjct: 179 AKEY 182
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 32/54 (59%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 60
+G+ V+L +WDTAGQE F IT AYYRGA ++ + D SF +W V
Sbjct: 55 DGKRVKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRTWFANV 108
>gi|89258441|gb|ABD65444.1| Rab35 [Suberites domuncula]
Length = 200
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 75/148 (50%)
Query: 50 FEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTID 109
F + + V K + GE+V+L +WDTAGQE F IT YYRG ++ + +
Sbjct: 33 FSGTYITTIGVDFKIRTIDVNGEKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTN 92
Query: 110 RDSFEAAHSWKMKVENECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVK 169
+SF W +++ C + +LV NK D ++ VV E+A + +G +L TS K
Sbjct: 93 GESFVNVKRWLQEIDQNCDVVNRILVGNKNDCPERKVVQTEDATKFADQIGIQLFETSAK 152
Query: 170 EDINVNSIFRYLTTKCLSELRQQEEEYS 197
E++NV +F +T L + ++ S
Sbjct: 153 ENLNVEEVFYAITRLVLQTKKDSAKDSS 180
>gi|57525915|ref|NP_001003548.1| ras-related protein Rab-35 [Danio rerio]
gi|50418486|gb|AAH77124.1| RAB35, member RAS oncogene family [Danio rerio]
Length = 201
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 77/151 (50%), Gaps = 5/151 (3%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
++F ++ + V K E GE+V+L +WDTAGQE F IT YYRG V+ +
Sbjct: 31 NTFSGSYITTIGVDFKIRTVELNGEKVKLQIWDTAGQERFRTITSTYYRGTHGVVVVYDV 90
Query: 108 IDRDSFEAAHSWKMKVENECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTS 167
+SF W ++ C ++ +LV NK D + VV +A + +G L TS
Sbjct: 91 TSAESFVNVKRWLHEINQNCDDVCRILVGNKNDDPNSKVVETNDAQKFAEQMGISLFETS 150
Query: 168 VKEDINVNSIFRYLTTKCLSELRQQEEEYSI 198
KE++NV +F C++EL + ++ S+
Sbjct: 151 AKENVNVEEMFN-----CITELVLRAKKESV 176
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 28/49 (57%)
Query: 8 GEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
GE+V+L +WDTAGQE F IT YYRG V+ + +SF W
Sbjct: 54 GEKVKLQIWDTAGQERFRTITSTYYRGTHGVVVVYDVTSAESFVNVKRW 102
>gi|343424940|emb|CBQ68478.1| probable SEC4-like Rab/GTPase [Sporisorium reilianum SRZ2]
Length = 208
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/127 (37%), Positives = 71/127 (55%), Gaps = 2/127 (1%)
Query: 64 RTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 123
RTI E +G+ ++L +WDTAGQE F IT AYYRGA ++ F D+ SFE +W +
Sbjct: 49 RTI-ELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVFDVTDQKSFENVRTWHANI 107
Query: 124 ENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLT 182
E E + +L+ NK D ++ V E+ + L+R LG + TS K + NV F +L
Sbjct: 108 EQHASEGVSKILIGNKSDWEEKRAVTTEQGEELARELGIPYIETSAKSNANVEEAFFHLA 167
Query: 183 TKCLSEL 189
+ + L
Sbjct: 168 REVKTRL 174
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 34/54 (62%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 60
+G+ ++L +WDTAGQE F IT AYYRGA ++ F D+ SFE +W +
Sbjct: 54 DGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVFDVTDQKSFENVRTWHANI 107
>gi|378734099|gb|EHY60558.1| GTP-binding protein ypt2 [Exophiala dermatitidis NIH/UT8656]
Length = 209
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 85/183 (46%), Gaps = 9/183 (4%)
Query: 19 AGQEEFDAITKAYYRGAQA-----CVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEE 73
AG +D + K G C++ FS DSF + + + K + +G+
Sbjct: 2 AGTRNYDFLIKLLLIGDSGVGKSCCLLRFS---EDSFTPSFITTIGIDFKIRTIDLDGKR 58
Query: 74 VRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGE-IPT 132
V+L +WDTAGQE F IT AYYRGA ++ + D SF +W VE E +
Sbjct: 59 VKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDEKSFNNIRTWFANVEQHASEGVNK 118
Query: 133 VLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSELRQQ 192
+L+ NK D ++ VV+ E+ L+ LG + S K +IN+ F L + L
Sbjct: 119 ILIGNKCDWEEKRVVSTEQGQALADELGIPFLEVSAKANINIEKAFYSLASDVKKRLIDS 178
Query: 193 EEE 195
+E
Sbjct: 179 SKE 181
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 32/54 (59%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 60
+G+ V+L +WDTAGQE F IT AYYRGA ++ + D SF +W V
Sbjct: 55 DGKRVKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDEKSFNNIRTWFANV 108
>gi|225706608|gb|ACO09150.1| Ras-related protein Rab-35 [Osmerus mordax]
gi|225717328|gb|ACO14510.1| Ras-related protein Rab-35 [Esox lucius]
Length = 201
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 72/142 (50%), Gaps = 5/142 (3%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
++F ++ + V K E GE+V+L +WDTAGQE F IT YYRG ++ +
Sbjct: 31 NTFSGSYITTIGVDFKIRTVEINGEKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDV 90
Query: 108 IDRDSFEAAHSWKMKVENECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTS 167
+SF W ++ C ++ +LV NK D + VV +A + +G L TS
Sbjct: 91 TSAESFVNVKRWLHEINQNCDDVCRILVGNKNDDPNSKVVETTDAQKFAEQMGINLFETS 150
Query: 168 VKEDINVNSIFRYLTTKCLSEL 189
KE+INV +F C++EL
Sbjct: 151 AKENINVEEMF-----NCITEL 167
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 28/49 (57%)
Query: 8 GEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
GE+V+L +WDTAGQE F IT YYRG ++ + +SF W
Sbjct: 54 GEKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRW 102
>gi|398407001|ref|XP_003854966.1| hypothetical protein MYCGRDRAFT_99145 [Zymoseptoria tritici IPO323]
gi|339474850|gb|EGP89942.1| hypothetical protein MYCGRDRAFT_99145 [Zymoseptoria tritici IPO323]
Length = 207
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 80/169 (47%), Gaps = 9/169 (5%)
Query: 19 AGQEEFDAITKAYYRGAQA-----CVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEE 73
AG +D + K G C++ FS DSF + + + K E +G+
Sbjct: 2 AGSRNYDFLIKLLLIGDSGVGKSCCLLRFS---EDSFTPSFITTIGIDFKIRTIELDGKR 58
Query: 74 VRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGE-IPT 132
V+L +WDTAGQE F IT AYYRGA ++ + D SF +W VE E +
Sbjct: 59 VKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRTWFSNVEQHATEGVNK 118
Query: 133 VLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYL 181
+L+ NK D ++ V+ E+ L+ LG M S K +INV F L
Sbjct: 119 ILIGNKCDWEEKRAVSTEQGQALADELGIPFMEVSAKSNINVEKAFFSL 167
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 31/50 (62%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
+G+ V+L +WDTAGQE F IT AYYRGA ++ + D SF +W
Sbjct: 55 DGKRVKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRTW 104
>gi|420274|pir||G42148 GTP-binding protein rab16 - rat
Length = 198
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/160 (34%), Positives = 80/160 (50%), Gaps = 2/160 (1%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
DSF A + + K + ++L +WDTAGQE + IT AYYRGA ++ +
Sbjct: 24 DSFTPAFVSTVGIDFKVKTVYRHDKRIKLQIWDTAGQERYRTITTAYYRGAMGFLLMYDI 83
Query: 108 IDRDSFEAAHSWKMKVENECGEIPTV-LVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
+++SF A W +++ G P V LV NK DL D+ VV+ E+ L+ LG
Sbjct: 84 ANQESFTAVQDWLRRLKPIPGTTPQVILVGNKCDLEDERVVSAEDGQRLAGDLGFEFFEA 143
Query: 167 SVKEDINVNSIFRYLTTKCLSELRQQEEEYSING-NGLPP 205
S KE+INV +F L ++ + E S G NG P
Sbjct: 144 SAKENINVKQVFERLVDIICDKMNESLEPSSSPGSNGKGP 183
>gi|148234955|ref|NP_001079974.1| RAB35, member RAS oncogene family [Xenopus laevis]
gi|34784624|gb|AAH57747.1| MGC69101 protein [Xenopus laevis]
Length = 201
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 80/156 (51%), Gaps = 8/156 (5%)
Query: 34 GAQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKA 93
G + ++ F+ ++F ++ + V K E GE+V+L +WDTAGQE F IT
Sbjct: 20 GKSSLLLRFAD---NTFSGSYITTIGVDFKIRTVEINGEKVKLQIWDTAGQERFRTITST 76
Query: 94 YYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGEIPTVLVQNKIDLLDQSVVAPEEAD 153
YYRG ++ + +SF W ++ C ++ +LV NK D D+ VV E+A
Sbjct: 77 YYRGTHGVIVVYDVTSAESFVNVKRWLHEINQNCDDVCRILVGNKNDDPDRKVVETEDAY 136
Query: 154 LLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSEL 189
+ + RL TS K+++NV +F C++EL
Sbjct: 137 KFAAQMDIRLFETSAKDNLNVEEMF-----NCITEL 167
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 28/50 (56%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
GE+V+L +WDTAGQE F IT YYRG ++ + +SF W
Sbjct: 53 NGEKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRW 102
>gi|291397906|ref|XP_002715524.1| PREDICTED: RAB13, member RAS oncogene family [Oryctolagus
cuniculus]
Length = 203
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 86/174 (49%), Gaps = 11/174 (6%)
Query: 34 GAQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKA 93
G +I F+ DSF + + + + K + EG++++L +WDTAGQE F IT A
Sbjct: 20 GKTCLIIRFA---EDSFNSTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQERFKTITTA 76
Query: 94 YYRGAQACVITFSTIDRDSFEAAHSWKMKV-ENECGEIPTVLVQNKIDLLDQSVVAPEEA 152
YYRGA ++ + D SFE +W + EN + +L+ NK D+ + V E+A
Sbjct: 77 YYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCDMEAKRKVRKEQA 136
Query: 153 DLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSE--LRQQEEEYSINGNGLP 204
L++ G R TS K +NV+ F CL+ L + S NG+ P
Sbjct: 137 TKLAQEHGIRFFETSAKSSVNVDEAF-----SCLARDILLKSGGRRSGNGSKTP 185
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 44/75 (58%), Gaps = 7/75 (9%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVSIKRTI 66
EG++++L +WDTAGQE F IT AYYRGA ++ + D SFE +W ++I
Sbjct: 53 EGKKIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNW------MKSI 106
Query: 67 KECEGEEV-RLMLWD 80
KE V RL+L +
Sbjct: 107 KENASAGVERLLLGN 121
>gi|327269229|ref|XP_003219397.1| PREDICTED: ras-related protein Rab-30-like [Anolis carolinensis]
Length = 203
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/144 (36%), Positives = 76/144 (52%), Gaps = 1/144 (0%)
Query: 50 FEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTID 109
F + V E GE+V+L +WDTAGQE F +IT++YYR A A ++T+
Sbjct: 34 FPPGQGATIGVDFMIKTVEINGEKVKLQIWDTAGQERFRSITQSYYRSANALILTYDITC 93
Query: 110 RDSFEAAHSWKMKVEN-ECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSV 168
+SF W ++E ++ TVLV NKIDL D+ V+ + A+ S A + TS
Sbjct: 94 EESFRCLPEWLREIEQYASNKVITVLVGNKIDLADKREVSQQRAEEFSEAQDMYYLETSA 153
Query: 169 KEDINVNSIFRYLTTKCLSELRQQ 192
KE NV +F L + +SE RQ
Sbjct: 154 KESDNVEKLFLDLACRLISEARQN 177
Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 33/49 (67%)
Query: 8 GEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
GE+V+L +WDTAGQE F +IT++YYR A A ++T+ +SF W
Sbjct: 55 GEKVKLQIWDTAGQERFRSITQSYYRSANALILTYDITCEESFRCLPEW 103
>gi|443896742|dbj|GAC74085.1| GTP-binding protein SEC4 [Pseudozyma antarctica T-34]
Length = 208
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/151 (33%), Positives = 78/151 (51%), Gaps = 11/151 (7%)
Query: 64 RTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 123
RTI E +G+ ++L +WDTAGQE F IT AYYRGA ++ F D+ SFE +W +
Sbjct: 49 RTI-ELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVFDVTDQKSFENVRTWHANI 107
Query: 124 ENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIF---- 178
E E + +L+ NK D ++ V+ E+ + L+R LG + TS K + NV F
Sbjct: 108 EQHASEGVSKILIGNKSDWEEKRAVSTEQGEELARELGIPYIETSAKSNANVEEAFFNLA 167
Query: 179 -----RYLTTKCLSELRQQEEEYSINGNGLP 204
R + T +++ ++N N P
Sbjct: 168 REVKTRLIDTAAVTQASPAAAAGNVNVNSAP 198
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 34/54 (62%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 60
+G+ ++L +WDTAGQE F IT AYYRGA ++ F D+ SFE +W +
Sbjct: 54 DGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVFDVTDQKSFENVRTWHANI 107
>gi|383100637|emb|CCF17540.1| RabE GTPase protein [Micrasterias denticulata]
Length = 206
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/132 (37%), Positives = 67/132 (50%), Gaps = 1/132 (0%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
DSF + V K + +GE+V+L +WDTAGQE F IT AYYRGA V+ +
Sbjct: 35 DSFSQTFISTIGVDFKTRTIDIDGEQVKLSIWDTAGQERFRTITAAYYRGANGIVLVYDI 94
Query: 108 IDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
SF + W +E E + +LV NK D+ D+ VV+ E+ L+ + T
Sbjct: 95 TSESSFNSIRGWIRNIEEHASENVCKILVGNKADMEDRRVVSKEQGQALANEFRIKFFET 154
Query: 167 SVKEDINVNSIF 178
S K DINV F
Sbjct: 155 SAKADINVEEAF 166
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 48/87 (55%), Gaps = 7/87 (8%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVSIKRTI 66
+GE+V+L +WDTAGQE F IT AYYRGA V+ + SF + W R I
Sbjct: 57 DGEQVKLSIWDTAGQERFRTITAAYYRGANGIVLVYDITSESSFNSIRGW------IRNI 110
Query: 67 KECEGEEV-RLMLWDTAGQEEFDAITK 92
+E E V ++++ + A E+ ++K
Sbjct: 111 EEHASENVCKILVGNKADMEDRRVVSK 137
>gi|319401899|ref|NP_001187352.1| ras-related protein Rab-35 [Ictalurus punctatus]
gi|308322789|gb|ADO28532.1| ras-related protein rab-35 [Ictalurus punctatus]
Length = 201
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 72/142 (50%), Gaps = 5/142 (3%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
++F ++ + V K E GE+V+L +WDTAGQE F IT YYRG ++ +
Sbjct: 31 NTFSGSYITTIGVDFKIRTVEINGEKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDV 90
Query: 108 IDRDSFEAAHSWKMKVENECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTS 167
+SF W ++ C ++ +LV NK D + VV +A + + RL TS
Sbjct: 91 TSAESFVNVKRWLHEINQNCDDVCRILVGNKNDDPNSKVVETNDAQKFAEQMSIRLFETS 150
Query: 168 VKEDINVNSIFRYLTTKCLSEL 189
KE+INV +F C++EL
Sbjct: 151 AKENINVEEMFN-----CITEL 167
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 28/49 (57%)
Query: 8 GEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
GE+V+L +WDTAGQE F IT YYRG ++ + +SF W
Sbjct: 54 GEKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRW 102
>gi|242794469|ref|XP_002482380.1| Rab GTPase SrgA, putative [Talaromyces stipitatus ATCC 10500]
gi|218718968|gb|EED18388.1| Rab GTPase SrgA, putative [Talaromyces stipitatus ATCC 10500]
Length = 206
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 81/171 (47%), Gaps = 9/171 (5%)
Query: 19 AGQEEFDAITKAYYRGAQA-----CVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEE 73
AG +D + K G C++ FS DSF + + + K E +G+
Sbjct: 2 AGTRNYDFLIKLLLIGDSGVGKSCCLLRFS---EDSFTPSFITTIGIDFKIRTIELDGKR 58
Query: 74 VRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGE-IPT 132
V+L +WDTAGQE F IT AYYRGA ++ + D SF +W VE E +
Sbjct: 59 VKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRTWFSNVEQHASEGVHK 118
Query: 133 VLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLTT 183
+L+ NK D ++ V E+ L+ LG + S K +INV+ F L +
Sbjct: 119 ILIGNKCDWEEKRAVTTEQGQKLADELGIPFLEVSAKNNINVDKAFYSLAS 169
>gi|169784109|ref|XP_001826516.1| GTP-binding protein ypt2 [Aspergillus oryzae RIB40]
gi|83775261|dbj|BAE65383.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|391868528|gb|EIT77742.1| GTP-binding protein [Aspergillus oryzae 3.042]
Length = 206
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 83/172 (48%), Gaps = 9/172 (5%)
Query: 19 AGQEEFDAITKAYYRGAQA-----CVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEE 73
AG +D + K G C++ FS DSF + + + K E +G+
Sbjct: 2 AGTRNYDFLIKLLLIGDSGVGKSCCLLRFS---EDSFTPSFITTIGIDFKIRTIELDGKR 58
Query: 74 VRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGE-IPT 132
V+L +WDTAGQE F IT AYYRGA ++ + D SF+ +W VE E +
Sbjct: 59 VKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFQNIRTWFSNVEQHASEGVHK 118
Query: 133 VLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLTTK 184
+L+ NK D ++ V+ E+ L+ LG + S K +IN+ F L ++
Sbjct: 119 ILIGNKCDWEEKRAVSTEQGQQLADELGIPFLEVSAKNNINIEKAFYNLASE 170
>gi|121714245|ref|XP_001274733.1| Rab GTPase SrgA, putative [Aspergillus clavatus NRRL 1]
gi|119402887|gb|EAW13307.1| Rab GTPase SrgA, putative [Aspergillus clavatus NRRL 1]
Length = 206
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 82/171 (47%), Gaps = 9/171 (5%)
Query: 19 AGQEEFDAITKAYYRGAQA-----CVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEE 73
AG +D + K G C++ FS DSF + + + K E +G+
Sbjct: 2 AGTRNYDFLIKLLLIGDSGVGKSCCLLRFS---EDSFTPSFITTIGIDFKIRTIELDGKR 58
Query: 74 VRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGE-IPT 132
V+L +WDTAGQE F IT AYYRGA ++ + D SF+ +W VE E +
Sbjct: 59 VKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFQNIRTWFSNVEQHASEGVHK 118
Query: 133 VLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLTT 183
+L+ NK D ++ V+ E+ L+ LG + S K +IN+ F L +
Sbjct: 119 ILIGNKCDWEEKRAVSTEQGQQLADELGIPFLEVSAKNNINIEKAFYNLAS 169
>gi|338727753|ref|XP_001488922.3| PREDICTED: ras-related protein Rab-35-like [Equus caballus]
Length = 262
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 75/142 (52%), Gaps = 5/142 (3%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
++F ++ + V K E GE+V+L +WDTAGQE F IT YYRG ++ +
Sbjct: 92 NTFSGSYITTIGVDFKIRTVEINGEKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDV 151
Query: 108 IDRDSFEAAHSWKMKVENECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTS 167
+SF W ++ C ++ +LV NK D ++ VV E+A + +G +L TS
Sbjct: 152 TSAESFVNVKRWLHEINQNCDDVCRILVGNKNDDPERKVVETEDAYKFAGQMGIQLFETS 211
Query: 168 VKEDINVNSIFRYLTTKCLSEL 189
KE++NV +F C++EL
Sbjct: 212 AKENVNVEEMF-----NCITEL 228
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 28/49 (57%)
Query: 8 GEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
GE+V+L +WDTAGQE F IT YYRG ++ + +SF W
Sbjct: 115 GEKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRW 163
>gi|340720307|ref|XP_003398582.1| PREDICTED: ras-related protein Rab-10-like isoform 1 [Bombus
terrestris]
Length = 200
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 81/163 (49%), Gaps = 2/163 (1%)
Query: 34 GAQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKA 93
G I F D D+F + + K E G++++L +WDTAGQE F IT +
Sbjct: 19 GVGKTCILFRFSD-DAFSTTFISTIGIDFKIKTVELRGKKIKLQIWDTAGQERFHTITTS 77
Query: 94 YYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEA 152
YYRGA ++ + + +FE W ++ E + +++ NK D+ D+ VV+
Sbjct: 78 YYRGAMGIMLVYDITNEKTFENIVKWLRNIDEHANEDVEKMILGNKSDMEDKRVVSTARG 137
Query: 153 DLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSELRQQEEE 195
+ ++R G R M TS K DIN++ F LT L + +E +
Sbjct: 138 EAIAREHGIRFMETSAKADINIDRAFNELTEAILEKTHGKEPQ 180
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 39/71 (54%), Gaps = 6/71 (8%)
Query: 8 GEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVSIKRTIK 67
G++++L +WDTAGQE F IT +YYRGA ++ + + +FE W R I
Sbjct: 55 GKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKTFENIVKW------LRNID 108
Query: 68 ECEGEEVRLML 78
E E+V M+
Sbjct: 109 EHANEDVEKMI 119
>gi|255935933|ref|XP_002558993.1| Pc13g05590 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211583613|emb|CAP91628.1| Pc13g05590 [Penicillium chrysogenum Wisconsin 54-1255]
gi|425777724|gb|EKV15880.1| Rab GTPase SrgA, putative [Penicillium digitatum PHI26]
gi|425782706|gb|EKV20602.1| Rab GTPase SrgA, putative [Penicillium digitatum Pd1]
Length = 206
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 82/171 (47%), Gaps = 9/171 (5%)
Query: 19 AGQEEFDAITKAYYRGAQA-----CVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEE 73
AG +D + K G C++ FS DSF + + + K E +G+
Sbjct: 2 AGTRNYDFLIKLLLIGDSGVGKSCCLLRFS---EDSFTPSFITTIGIDFKIRTIELDGKR 58
Query: 74 VRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGE-IPT 132
V+L +WDTAGQE F IT AYYRGA ++ + D SF+ +W VE E +
Sbjct: 59 VKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFQNIRTWFSNVEQHASEGVHK 118
Query: 133 VLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLTT 183
+L+ NK D ++ V+ E+ L+ LG + S K +IN+ F L +
Sbjct: 119 ILIGNKCDWEEKRAVSTEQGQQLADELGIPFLEVSAKNNINIEKAFYSLAS 169
>gi|16974365|gb|AAL31108.1| AT4g17530/dl4800c [Arabidopsis thaliana]
Length = 202
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 77/159 (48%), Gaps = 6/159 (3%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
DS+ ++ + V K E +G+ ++L +WDTAGQE F IT +YYRGA ++T+
Sbjct: 31 DSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVTYDV 90
Query: 108 IDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
D +SF W +++ E + +LV NK DL Q VV+ E A + LG + T
Sbjct: 91 TDLESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTSQKVVSTETAKAFADELGIPFLET 150
Query: 167 SVKEDINVNSIFRYLTTKCLSELRQQEEEYSINGNGLPP 205
S K NV F +T + + Q G PP
Sbjct: 151 SAKNATNVEEAFMAMTAAIKTRMASQPA-----GGSKPP 184
>gi|189204310|ref|XP_001938490.1| GTP-binding protein SAS1 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|330920200|ref|XP_003298922.1| hypothetical protein PTT_09780 [Pyrenophora teres f. teres 0-1]
gi|187985589|gb|EDU51077.1| GTP-binding protein SAS1 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|311327651|gb|EFQ92986.1| hypothetical protein PTT_09780 [Pyrenophora teres f. teres 0-1]
Length = 206
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 82/171 (47%), Gaps = 9/171 (5%)
Query: 19 AGQEEFDAITKAYYRGAQA-----CVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEE 73
AG +D + K G C++ FS DSF + + + K E +G+
Sbjct: 2 AGSRNYDFLIKLLLIGDSGVGKSCCLLRFS---EDSFTPSFITTIGIDFKIRTIELDGKR 58
Query: 74 VRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGE-IPT 132
V+L +WDTAGQE F IT AYYRGA ++ + D SF +W VE E +
Sbjct: 59 VKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFTNIRTWFSNVEQHATEGVNK 118
Query: 133 VLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLTT 183
+L+ NK D ++ V+ E+ L+ LG + S K +INV+ F L +
Sbjct: 119 ILIGNKCDWEEKRAVSTEQGQALADELGIPFLEVSAKSNINVDKAFYSLAS 169
>gi|115388891|ref|XP_001211951.1| GTP-binding protein SAS1 [Aspergillus terreus NIH2624]
gi|114196035|gb|EAU37735.1| GTP-binding protein SAS1 [Aspergillus terreus NIH2624]
Length = 206
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 83/172 (48%), Gaps = 9/172 (5%)
Query: 19 AGQEEFDAITKAYYRGAQA-----CVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEE 73
AG +D + K G C++ FS DSF + + + K E +G+
Sbjct: 2 AGTRNYDFLIKLLLIGDSGVGKSCCLLRFS---EDSFTPSFITTIGIDFKIRTIELDGKR 58
Query: 74 VRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGE-IPT 132
V+L +WDTAGQE F IT AYYRGA ++ + D SF+ +W VE E +
Sbjct: 59 VKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFQNIRTWFSNVEQHASEGVHK 118
Query: 133 VLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLTTK 184
+L+ NK D ++ V+ E+ L+ LG + S K +IN+ F L ++
Sbjct: 119 ILIGNKCDWEEKRAVSTEQGQQLADELGIPFLEVSAKNNINIEKAFYNLASE 170
>gi|358370660|dbj|GAA87271.1| secretion related GTPase (SrgA) [Aspergillus kawachii IFO 4308]
Length = 206
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 82/171 (47%), Gaps = 9/171 (5%)
Query: 19 AGQEEFDAITKAYYRGAQA-----CVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEE 73
AG +D + K G C++ FS DSF + + + K E +G+
Sbjct: 2 AGTRNYDFLIKLLLIGDSGVGKSCCLLRFS---EDSFTPSFITTIGIDFKIRTIELDGKR 58
Query: 74 VRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGE-IPT 132
V+L +WDTAGQE F IT AYYRGA ++ + D SF+ +W VE E +
Sbjct: 59 VKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFQNIRTWFSNVEQHASEGVHK 118
Query: 133 VLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLTT 183
+L+ NK D ++ V+ E+ L+ LG + S K +IN+ F L +
Sbjct: 119 ILIGNKCDWEEKRAVSTEQGQQLANELGIPFLEVSAKNNINIEKAFYDLAS 169
>gi|242010871|ref|XP_002426181.1| GTP-binding nuclear protein RAN1, putative [Pediculus humanus
corporis]
gi|212510232|gb|EEB13443.1| GTP-binding nuclear protein RAN1, putative [Pediculus humanus
corporis]
Length = 187
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 78/153 (50%), Gaps = 3/153 (1%)
Query: 34 GAQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKA 93
G + ++ F+ ++F + + V K + + V+L +WDTAGQE F IT
Sbjct: 5 GKSSLLVRFAD---NTFSGNYITTIGVDFKIKTVTIDDKRVKLQIWDTAGQERFRTITST 61
Query: 94 YYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGEIPTVLVQNKIDLLDQSVVAPEEAD 153
YYRG ++ + + +SF W ++EN C + +LV NK D D+ VV E+A
Sbjct: 62 YYRGTHGVIVVYDVTNGESFANVKRWIHEIENNCEVVNRILVGNKNDTPDRKVVLTEDAK 121
Query: 154 LLSRALGCRLMRTSVKEDINVNSIFRYLTTKCL 186
+ + +L TS K++INV +F +T + L
Sbjct: 122 RFADQMSLQLFETSAKDNINVEEMFMSITRQVL 154
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 28/50 (56%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
+ + V+L +WDTAGQE F IT YYRG ++ + + +SF W
Sbjct: 38 DDKRVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTNGESFANVKRW 87
>gi|444723190|gb|ELW63851.1| Ras-related protein Rab-35 [Tupaia chinensis]
Length = 317
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 75/142 (52%), Gaps = 5/142 (3%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
++F ++ + V K E GE+V+L +WDTAGQE F IT YYRG ++ +
Sbjct: 147 NTFSGSYITTIGVDFKIRTVEINGEKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDV 206
Query: 108 IDRDSFEAAHSWKMKVENECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTS 167
+SF W ++ C ++ +LV NK D ++ VV E+A + +G +L TS
Sbjct: 207 TSAESFVNVKRWLHEINQNCDDVCRILVGNKNDDPERKVVETEDAYKFAGQMGIQLFETS 266
Query: 168 VKEDINVNSIFRYLTTKCLSEL 189
KE++NV +F C++EL
Sbjct: 267 AKENVNVEEMF-----NCITEL 283
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 28/49 (57%)
Query: 8 GEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
GE+V+L +WDTAGQE F IT YYRG ++ + +SF W
Sbjct: 170 GEKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRW 218
>gi|18422766|ref|NP_568678.1| RAB GTPase-1A [Arabidopsis thaliana]
gi|297794499|ref|XP_002865134.1| hypothetical protein ARALYDRAFT_494258 [Arabidopsis lyrata subsp.
lyrata]
gi|75172011|sp|Q9FPJ4.1|RAD2B_ARATH RecName: Full=Ras-related protein RABD2b; Short=AtRABD2b; AltName:
Full=Ras-related protein Rab1A; Short=AtRab1A
gi|11762128|gb|AAG40342.1|AF324990_1 AT5g47200 [Arabidopsis thaliana]
gi|19347885|gb|AAL85999.1| putative ras-related small GTP-binding protein [Arabidopsis
thaliana]
gi|21281060|gb|AAM45061.1| putative ras-related small GTP-binding protein [Arabidopsis
thaliana]
gi|21553520|gb|AAM62613.1| ras-related small GTP-binding protein-like protein [Arabidopsis
thaliana]
gi|71143080|gb|AAZ23931.1| At5g47200 [Arabidopsis thaliana]
gi|107738243|gb|ABF83667.1| At5g47200 [Arabidopsis thaliana]
gi|110742473|dbj|BAE99155.1| ras-related small GTP-binding protein-like [Arabidopsis thaliana]
gi|297310969|gb|EFH41393.1| hypothetical protein ARALYDRAFT_494258 [Arabidopsis lyrata subsp.
lyrata]
gi|332008100|gb|AED95483.1| RAB GTPase-1A [Arabidopsis thaliana]
Length = 202
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 77/159 (48%), Gaps = 6/159 (3%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
DS+ ++ + V K E +G+ ++L +WDTAGQE F IT +YYRGA ++T+
Sbjct: 31 DSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVTYDV 90
Query: 108 IDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
D +SF W +++ E + +LV NK DL Q VV+ E A + LG + T
Sbjct: 91 TDLESFNNVKQWLNEIDRYASENVNKLLVGNKNDLTSQKVVSTETAKAFADELGIPFLET 150
Query: 167 SVKEDINVNSIFRYLTTKCLSELRQQEEEYSINGNGLPP 205
S K NV F +T + + Q G PP
Sbjct: 151 SAKNATNVEEAFMAMTAAIKTRMASQPA-----GGAKPP 184
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 32/50 (64%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
+G+ ++L +WDTAGQE F IT +YYRGA ++T+ D +SF W
Sbjct: 53 DGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVTYDVTDLESFNNVKQW 102
>gi|451847505|gb|EMD60812.1| hypothetical protein COCSADRAFT_97517 [Cochliobolus sativus ND90Pr]
Length = 206
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 81/169 (47%), Gaps = 9/169 (5%)
Query: 19 AGQEEFDAITKAYYRGAQA-----CVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEE 73
AG +D + K G C++ FS DSF + + + K E +G+
Sbjct: 2 AGSRNYDFLIKLLLIGDSGVGKSCCLLRFS---EDSFTPSFITTIGIDFKIRTIELDGKR 58
Query: 74 VRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGE-IPT 132
V+L +WDTAGQE F IT AYYRGA ++ + D SF +W VE E +
Sbjct: 59 VKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFTNIRTWFANVEQHATEGVNK 118
Query: 133 VLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYL 181
+L+ NK D ++ V+ E+ L+ LG + S K +INV+ F L
Sbjct: 119 ILIGNKCDWEEKRAVSTEQGQALADELGIPFLEVSAKSNINVDKAFYSL 167
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 32/54 (59%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 60
+G+ V+L +WDTAGQE F IT AYYRGA ++ + D SF +W V
Sbjct: 55 DGKRVKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFTNIRTWFANV 108
>gi|431892392|gb|ELK02832.1| Ras-related protein Rab-13 [Pteropus alecto]
Length = 184
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/143 (34%), Positives = 75/143 (52%), Gaps = 4/143 (2%)
Query: 34 GAQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKA 93
G +I F+ D+F + + + K + EG++++L +WDTAGQE F IT A
Sbjct: 20 GKTCLIIRFA---EDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQERFKTITTA 76
Query: 94 YYRGAQACVITFSTIDRDSFEAAHSWKMKV-ENECGEIPTVLVQNKIDLLDQSVVAPEEA 152
YYRGA ++ + D SFE +W + EN + +L+ NK D+ + V E+A
Sbjct: 77 YYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKSDMEAKRKVPGEQA 136
Query: 153 DLLSRALGCRLMRTSVKEDINVN 175
D L+R G R TS K +NV+
Sbjct: 137 DKLAREHGIRFFETSAKSSMNVD 159
Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 46/80 (57%), Gaps = 7/80 (8%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVSIKRTI 66
EG++++L +WDTAGQE F IT AYYRGA ++ + D SFE +W ++I
Sbjct: 53 EGKKIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNW------MKSI 106
Query: 67 KECEGEEV-RLMLWDTAGQE 85
KE V RL+L + + E
Sbjct: 107 KENASAGVERLLLGNKSDME 126
>gi|70982277|ref|XP_746667.1| Rab GTPase SrgA [Aspergillus fumigatus Af293]
gi|119486547|ref|XP_001262318.1| Rab GTPase SrgA, putative [Neosartorya fischeri NRRL 181]
gi|66844290|gb|EAL84629.1| Rab GTPase SrgA, putative [Aspergillus fumigatus Af293]
gi|119410475|gb|EAW20421.1| Rab GTPase SrgA, putative [Neosartorya fischeri NRRL 181]
gi|159122097|gb|EDP47219.1| Rab GTPase SrgA, putative [Aspergillus fumigatus A1163]
Length = 206
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 82/171 (47%), Gaps = 9/171 (5%)
Query: 19 AGQEEFDAITKAYYRGAQA-----CVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEE 73
AG +D + K G C++ FS DSF + + + K E +G+
Sbjct: 2 AGTRNYDFLIKLLLIGDSGVGKSCCLLRFS---EDSFTPSFITTIGIDFKIRTIELDGKR 58
Query: 74 VRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGE-IPT 132
V+L +WDTAGQE F IT AYYRGA ++ + D SF+ +W VE E +
Sbjct: 59 VKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFQNIRTWFSNVEQHASEGVHK 118
Query: 133 VLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLTT 183
+L+ NK D ++ V+ E+ L+ LG + S K +IN+ F L +
Sbjct: 119 ILIGNKCDWEEKRAVSTEQGQQLADELGIPFLEVSAKNNINIEKAFYSLAS 169
>gi|145248582|ref|XP_001400630.1| GTP-binding protein ypt2 [Aspergillus niger CBS 513.88]
gi|11558647|emb|CAC17832.1| secretion related GTPase, (SrgA) [Aspergillus niger]
gi|134081297|emb|CAK41800.1| secretion related GTPase srgA-Aspergillus niger
gi|350639164|gb|EHA27518.1| hypothetical protein ASPNIDRAFT_210814 [Aspergillus niger ATCC
1015]
Length = 206
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 82/171 (47%), Gaps = 9/171 (5%)
Query: 19 AGQEEFDAITKAYYRGAQA-----CVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEE 73
AG +D + K G C++ FS DSF + + + K E +G+
Sbjct: 2 AGTRNYDFLIKLLLIGDSGVGKSCCLLRFS---EDSFTPSFITTIGIDFKIRTIELDGKR 58
Query: 74 VRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGE-IPT 132
V+L +WDTAGQE F IT AYYRGA ++ + D SF+ +W VE E +
Sbjct: 59 VKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFQNIRTWFSNVEQHASEGVHK 118
Query: 133 VLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLTT 183
+L+ NK D ++ V+ E+ L+ LG + S K +IN+ F L +
Sbjct: 119 ILIGNKCDWEEKRAVSTEQGQQLANELGIPFLEVSAKNNINIEKAFYDLAS 169
>gi|389628708|ref|XP_003712007.1| GTP-binding protein ypt2 [Magnaporthe oryzae 70-15]
gi|351644339|gb|EHA52200.1| GTP-binding protein ypt2 [Magnaporthe oryzae 70-15]
gi|440471122|gb|ELQ40157.1| GTP-binding protein SAS1 [Magnaporthe oryzae Y34]
gi|440483228|gb|ELQ63646.1| GTP-binding protein SAS1 [Magnaporthe oryzae P131]
Length = 206
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 76/151 (50%), Gaps = 4/151 (2%)
Query: 34 GAQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKA 93
G C++ FS DSF + + + K E +G+ V+L +WDTAGQE F IT A
Sbjct: 21 GKSCCLLRFS---EDSFTPSFITTIGIDFKIRTIELDGKRVKLQIWDTAGQERFRTITTA 77
Query: 94 YYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEA 152
YYRGA ++ + D SF +W VE E + +L+ NK D ++ V+ E+
Sbjct: 78 YYRGAMGILLVYDVTDERSFNNIRTWFANVEQHASEGVNKILIGNKCDWEEKRAVSTEQG 137
Query: 153 DLLSRALGCRLMRTSVKEDINVNSIFRYLTT 183
L+ LG + S K +IN++ F L +
Sbjct: 138 QALADELGIPFLEVSAKGNINIDKAFYSLAS 168
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 32/54 (59%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 60
+G+ V+L +WDTAGQE F IT AYYRGA ++ + D SF +W V
Sbjct: 54 DGKRVKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRTWFANV 107
>gi|224071962|ref|XP_002199537.1| PREDICTED: ras-related protein Rab-35 [Taeniopygia guttata]
Length = 201
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 80/156 (51%), Gaps = 8/156 (5%)
Query: 34 GAQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKA 93
G + ++ F+ ++F ++ + V K E GE+V+L +WDTAGQE F IT
Sbjct: 20 GKSSLLLRFAD---NTFSGSYITTIGVDFKIRTVEINGEKVKLQIWDTAGQERFRTITST 76
Query: 94 YYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGEIPTVLVQNKIDLLDQSVVAPEEAD 153
YYRG ++ + +SF W ++ C ++ +LV NK D D+ VV E+A
Sbjct: 77 YYRGTHGVIVVYDVTSAESFVNVKRWLHEINQNCDDVCRILVGNKNDDPDRKVVETEDAY 136
Query: 154 LLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSEL 189
+ + +L TS KE+INV +F C++EL
Sbjct: 137 KFAGQMEIQLFETSAKENINVEEMF-----NCITEL 167
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 28/49 (57%)
Query: 8 GEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
GE+V+L +WDTAGQE F IT YYRG ++ + +SF W
Sbjct: 54 GEKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRW 102
>gi|357122765|ref|XP_003563085.1| PREDICTED: GTP-binding protein YPTM2-like [Brachypodium distachyon]
Length = 203
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/146 (33%), Positives = 75/146 (51%), Gaps = 1/146 (0%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
DS+ ++ + V K E +G+ ++L +WDTAGQE F IT +YYRGA +I +
Sbjct: 31 DSYLESYISTIGVDFKIRTVEQDGKTMKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDV 90
Query: 108 IDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
D+DSF W +++ E + +LV NK DL D+ VV+ E A + +G M T
Sbjct: 91 TDQDSFNNVKQWLNEIDRYASENVNKLLVGNKSDLTDKKVVSYETAKAFADEIGIPFMET 150
Query: 167 SVKEDINVNSIFRYLTTKCLSELRQQ 192
S K +NV F ++ + Q
Sbjct: 151 SAKNALNVEQAFMAMSASIKDRMASQ 176
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 32/50 (64%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
+G+ ++L +WDTAGQE F IT +YYRGA +I + D+DSF W
Sbjct: 53 DGKTMKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQDSFNNVKQW 102
>gi|344295350|ref|XP_003419375.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein Rab-35-like
[Loxodonta africana]
Length = 252
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 81/156 (51%), Gaps = 8/156 (5%)
Query: 34 GAQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKA 93
G + ++ F+ ++F ++ + V K E GE+V+L +WDTAGQE F IT
Sbjct: 71 GKSSLLLRFAD---NTFSGSYITTIGVDFKIRTVEISGEKVKLQIWDTAGQERFRTITST 127
Query: 94 YYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGEIPTVLVQNKIDLLDQSVVAPEEAD 153
YYRG ++ + +SF W ++ C ++ +LV NK D ++ VV E+A
Sbjct: 128 YYRGTHGVIVVYDVTSAESFVNVKRWLHEINQNCDDVCRILVGNKNDDPERKVVETEDAY 187
Query: 154 LLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSEL 189
+ +G +L TS KE++NV +F C++EL
Sbjct: 188 KFAGQMGIQLFETSAKENVNVEEMF-----NCITEL 218
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 28/49 (57%)
Query: 8 GEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
GE+V+L +WDTAGQE F IT YYRG ++ + +SF W
Sbjct: 105 GEKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRW 153
>gi|350417568|ref|XP_003491486.1| PREDICTED: ras-related protein Rab-10-like [Bombus impatiens]
Length = 200
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 81/163 (49%), Gaps = 2/163 (1%)
Query: 34 GAQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKA 93
G I F D D+F + + K E G++++L +WDTAGQE F IT +
Sbjct: 19 GVGKTCILFRFSD-DAFSTTFISTIGIDFKIKTVELRGKKIKLQIWDTAGQERFHTITTS 77
Query: 94 YYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEA 152
YYRGA ++ + + +FE W ++ E + +++ NK D+ D+ VV+
Sbjct: 78 YYRGAMGIMLVYDITNEKTFENIVKWLRNIDEHANEDVEKMILGNKSDMEDKRVVSTGRG 137
Query: 153 DLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSELRQQEEE 195
+ ++R G R M TS K DIN++ F LT L + +E +
Sbjct: 138 EAIAREHGIRFMETSAKADINIDRAFNELTEAILEKTHGKEPQ 180
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 39/71 (54%), Gaps = 6/71 (8%)
Query: 8 GEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVSIKRTIK 67
G++++L +WDTAGQE F IT +YYRGA ++ + + +FE W R I
Sbjct: 55 GKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKTFENIVKW------LRNID 108
Query: 68 ECEGEEVRLML 78
E E+V M+
Sbjct: 109 EHANEDVEKMI 119
>gi|451996574|gb|EMD89040.1| hypothetical protein COCHEDRAFT_1140780 [Cochliobolus
heterostrophus C5]
Length = 206
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 81/169 (47%), Gaps = 9/169 (5%)
Query: 19 AGQEEFDAITKAYYRGAQA-----CVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEE 73
AG +D + K G C++ FS DSF + + + K E +G+
Sbjct: 2 AGSRNYDFLIKLLLIGDSGVGKSCCLLRFS---EDSFTPSFITTIGIDFKIRTIELDGKR 58
Query: 74 VRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGE-IPT 132
V+L +WDTAGQE F IT AYYRGA ++ + D SF +W VE E +
Sbjct: 59 VKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFTNIRTWFANVEQHATEGVNK 118
Query: 133 VLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYL 181
+L+ NK D ++ V+ E+ L+ LG + S K +INV+ F L
Sbjct: 119 ILIGNKCDWEEKRAVSTEQGQALADELGIPFLEVSAKSNINVDKAFYSL 167
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 32/54 (59%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 60
+G+ V+L +WDTAGQE F IT AYYRGA ++ + D SF +W V
Sbjct: 55 DGKRVKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFTNIRTWFANV 108
>gi|15236555|ref|NP_193486.1| RAB GTPase homolog 1C [Arabidopsis thaliana]
gi|297800342|ref|XP_002868055.1| hypothetical protein ARALYDRAFT_914960 [Arabidopsis lyrata subsp.
lyrata]
gi|75204021|sp|Q9SEH3.1|RAD2C_ARATH RecName: Full=Ras-related protein RABD2c; Short=AtRABD2c; AltName:
Full=Ras-related protein Rab1C; Short=AtRab1C
gi|6651023|gb|AAF22133.1|AF127134_1 ras-related small GTP-binding protein [Arabidopsis thaliana]
gi|7268505|emb|CAB78756.1| ras-related small GTP-binding protein RAB1c [Arabidopsis thaliana]
gi|15529161|gb|AAK97675.1| AT4g17530/dl4800c [Arabidopsis thaliana]
gi|110742819|dbj|BAE99310.1| ras-related small GTP-binding protein RAB1c [Arabidopsis thaliana]
gi|297313891|gb|EFH44314.1| hypothetical protein ARALYDRAFT_914960 [Arabidopsis lyrata subsp.
lyrata]
gi|332658507|gb|AEE83907.1| RAB GTPase homolog 1C [Arabidopsis thaliana]
Length = 202
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 77/159 (48%), Gaps = 6/159 (3%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
DS+ ++ + V K E +G+ ++L +WDTAGQE F IT +YYRGA ++T+
Sbjct: 31 DSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVTYDV 90
Query: 108 IDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
D +SF W +++ E + +LV NK DL Q VV+ E A + LG + T
Sbjct: 91 TDLESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTSQKVVSTETAKAFADELGIPFLET 150
Query: 167 SVKEDINVNSIFRYLTTKCLSELRQQEEEYSINGNGLPP 205
S K NV F +T + + Q G PP
Sbjct: 151 SAKNATNVEEAFMAMTAAIKTRMASQPA-----GGSKPP 184
>gi|238508846|ref|XP_002385605.1| Rab GTPase SrgA, putative [Aspergillus flavus NRRL3357]
gi|220688497|gb|EED44850.1| Rab GTPase SrgA, putative [Aspergillus flavus NRRL3357]
Length = 495
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/152 (32%), Positives = 77/152 (50%), Gaps = 4/152 (2%)
Query: 34 GAQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKA 93
G C++ FS DSF + + + K E +G+ V+L +WDTAGQE F IT A
Sbjct: 311 GKSCCLLRFS---EDSFTPSFITTIGIDFKIRTIELDGKRVKLQIWDTAGQERFRTITTA 367
Query: 94 YYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEA 152
YYRGA ++ + D SF+ +W VE E + +L+ NK D ++ V+ E+
Sbjct: 368 YYRGAMGILLVYDVTDERSFQNIRTWFSNVEQHASEGVHKILIGNKCDWEEKRAVSTEQG 427
Query: 153 DLLSRALGCRLMRTSVKEDINVNSIFRYLTTK 184
L+ LG + S K +IN+ F L ++
Sbjct: 428 QQLADELGIPFLEVSAKNNINIEKAFYNLASE 459
>gi|295671891|ref|XP_002796492.1| GTP-binding protein SAS1 [Paracoccidioides sp. 'lutzii' Pb01]
gi|226283472|gb|EEH39038.1| GTP-binding protein SAS1 [Paracoccidioides sp. 'lutzii' Pb01]
Length = 206
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 81/171 (47%), Gaps = 9/171 (5%)
Query: 19 AGQEEFDAITKAYYRGAQA-----CVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEE 73
AG +D + K G C++ FS DSF + + + K E +G+
Sbjct: 2 AGTRNYDFLIKLLLIGDSGVGKSCCLLRFS---EDSFTPSFITTIGIDFKIRTIELDGKR 58
Query: 74 VRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGE-IPT 132
V+L +WDTAGQE F IT AYYRGA ++ + D SF +W VE E +
Sbjct: 59 VKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRTWFSNVEQHASEGVHK 118
Query: 133 VLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLTT 183
+L+ NK D ++ V+ E+ L+ LG + S K +INV F L +
Sbjct: 119 MLIGNKCDWEEKRAVSTEQGQQLANELGIPFLEVSAKNNINVEKAFYTLAS 169
>gi|225681353|gb|EEH19637.1| GTP-binding protein SAS1 [Paracoccidioides brasiliensis Pb03]
gi|226288481|gb|EEH43993.1| GTP-binding protein SAS1 [Paracoccidioides brasiliensis Pb18]
Length = 206
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 81/171 (47%), Gaps = 9/171 (5%)
Query: 19 AGQEEFDAITKAYYRGAQA-----CVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEE 73
AG +D + K G C++ FS DSF + + + K E +G+
Sbjct: 2 AGTRNYDFLIKLLLIGDSGVGKSCCLLRFS---EDSFTPSFITTIGIDFKIRTIELDGKR 58
Query: 74 VRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGE-IPT 132
V+L +WDTAGQE F IT AYYRGA ++ + D SF +W VE E +
Sbjct: 59 VKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRTWFSNVEQHASEGVHK 118
Query: 133 VLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLTT 183
+L+ NK D ++ V+ E+ L+ LG + S K +INV F L +
Sbjct: 119 MLIGNKCDWEEKRAVSTEQGQQLANELGIPFLEVSAKNNINVEKAFYTLAS 169
>gi|239609095|gb|EEQ86082.1| GTP-binding protein SAS1 [Ajellomyces dermatitidis ER-3]
gi|327356417|gb|EGE85274.1| GTP-binding protein [Ajellomyces dermatitidis ATCC 18188]
Length = 205
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 81/171 (47%), Gaps = 9/171 (5%)
Query: 19 AGQEEFDAITKAYYRGAQA-----CVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEE 73
AG +D + K G C++ FS DSF + + + K E +G+
Sbjct: 2 AGTRNYDFLIKLLLIGDSGVGKSCCLLRFS---EDSFTPSFITTIGIDFKIRTIELDGKR 58
Query: 74 VRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGE-IPT 132
V+L +WDTAGQE F IT AYYRGA ++ + D SF +W VE E +
Sbjct: 59 VKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRTWFSNVEQHASEGVHK 118
Query: 133 VLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLTT 183
+L+ NK D ++ V+ E+ L+ LG + S K +INV F L +
Sbjct: 119 MLIGNKCDWEEKRAVSTEQGQQLANELGIPFLEVSAKNNINVEKAFYTLAS 169
>gi|403215515|emb|CCK70014.1| hypothetical protein KNAG_0D02650 [Kazachstania naganishii CBS
8797]
Length = 211
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 89/186 (47%), Gaps = 8/186 (4%)
Query: 22 EEFDAITKAYYRG----AQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLM 77
+++D+I K G ++C++ D F + + + K + G++++L
Sbjct: 9 KQYDSIMKVLLIGDSGVGKSCLLV--RFVEDKFSPSFITTIGIDFKIKTVDINGKKIKLQ 66
Query: 78 LWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW-KMKVENECGEIPTVLVQ 136
LWDTAGQE F IT AYYRGA ++ + D +FE +W K ++ + +LV
Sbjct: 67 LWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFENVKNWFKTVSDHATDDAQLLLVG 126
Query: 137 NKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSELRQQEEEY 196
NK D +D +V E+ + L + LG + S K+D NVN +F L L Q
Sbjct: 127 NKCD-MDTRLVTHEQGEALGKELGIPFVEASAKDDTNVNEVFFTLAKLIQGRLDSQSAAD 185
Query: 197 SINGNG 202
S G G
Sbjct: 186 STAGRG 191
>gi|89257579|gb|ABD65068.1| GTP-binding protein, putative [Brassica oleracea]
Length = 202
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/146 (33%), Positives = 75/146 (51%), Gaps = 1/146 (0%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
DS+ ++ + V K E +G+ ++L +WDTAGQE F IT +YYRGA ++T+
Sbjct: 31 DSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVTYDV 90
Query: 108 IDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
D++SF W +++ E + +LV NK DL Q VV+ E A + LG + T
Sbjct: 91 TDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTSQKVVSTETAKAFADELGIPFLET 150
Query: 167 SVKEDINVNSIFRYLTTKCLSELRQQ 192
S K NV F +T + + Q
Sbjct: 151 SAKNATNVEEAFMAMTAAIKTRMASQ 176
>gi|51468998|emb|CAH17999.1| RAB1-like [Poa pratensis]
Length = 203
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 76/146 (52%), Gaps = 1/146 (0%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
DS+ ++ + V K E +G+ ++L +WDTAGQE F IT +YYRGA +I +
Sbjct: 31 DSYLESYISTIGVDFKIRTVEQDGKTMKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDV 90
Query: 108 IDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
D+DSF W +++ + + +LV NK DL D+ VV+ E A + +G M T
Sbjct: 91 TDQDSFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMET 150
Query: 167 SVKEDINVNSIFRYLTTKCLSELRQQ 192
S+K +NV F ++ + Q
Sbjct: 151 SLKNALNVGQAFMAMSASIKDRMASQ 176
>gi|195432330|ref|XP_002064176.1| GK20025 [Drosophila willistoni]
gi|194160261|gb|EDW75162.1| GK20025 [Drosophila willistoni]
Length = 230
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 85/163 (52%), Gaps = 5/163 (3%)
Query: 35 AQACVITFSTIDR---DSFEAAHSWKMKVS-IKRTIKECEGEEVRLMLWDTAGQEEFDAI 90
+ CV S + R D F + H ++ S + + I + +L +WDTAGQE F A+
Sbjct: 20 GEGCVGKTSLVLRYMEDKFNSQHLSTLQASFVTKKITLPDERRAQLNIWDTAGQERFHAL 79
Query: 91 TKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENECG-EIPTVLVQNKIDLLDQSVVAP 149
YYRG+ ++ + D+DSF+ SW +++ G +I ++V NK DL DQ +
Sbjct: 80 GPIYYRGSDGALLVYDITDQDSFQKVKSWVRELKQMLGSDITLIIVGNKTDLEDQRAIDY 139
Query: 150 EEADLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSELRQQ 192
E A +R +G + + TS KE+ V +F LT L + +QQ
Sbjct: 140 ESAVQYARTVGAQYVETSAKENEGVTELFELLTQLMLDQRQQQ 182
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 39/67 (58%), Gaps = 6/67 (8%)
Query: 12 RLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEG 71
+L +WDTAGQE F A+ YYRG+ ++ + D+DSF+ SW R +K+ G
Sbjct: 64 QLNIWDTAGQERFHALGPIYYRGSDGALLVYDITDQDSFQKVKSW------VRELKQMLG 117
Query: 72 EEVRLML 78
++ L++
Sbjct: 118 SDITLII 124
>gi|440633729|gb|ELR03648.1| hypothetical protein GMDG_06296 [Geomyces destructans 20631-21]
Length = 253
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 79/169 (46%), Gaps = 9/169 (5%)
Query: 19 AGQEEFDAITKAYYRGAQA-----CVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEE 73
AG +D + K G C++ FS DSF + + + K E +G+
Sbjct: 55 AGSRNYDFLIKLLLIGDSGVGKSCCLLRFS---EDSFTPSFITTIGIDFKIRTIELDGKR 111
Query: 74 VRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGE-IPT 132
V+L +WDTAGQE F IT AYYRGA ++ + D SF +W VE E +
Sbjct: 112 VKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRTWFSNVEQHATEGVNK 171
Query: 133 VLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYL 181
+L+ NK D D+ V+ E L+ LG + S K +INV F L
Sbjct: 172 ILIGNKCDWDDKRTVSTERGQALADELGIPFLEVSAKANINVEKAFFSL 220
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 31/50 (62%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
+G+ V+L +WDTAGQE F IT AYYRGA ++ + D SF +W
Sbjct: 108 DGKRVKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRTW 157
>gi|407927386|gb|EKG20280.1| Ras GTPase [Macrophomina phaseolina MS6]
Length = 208
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 81/169 (47%), Gaps = 9/169 (5%)
Query: 19 AGQEEFDAITKAYYRGAQA-----CVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEE 73
AG +D + K G C++ FS DSF + + + K E +G+
Sbjct: 2 AGTRNYDFLIKLLLIGDSGVGKSCCLLRFS---EDSFTPSFITTIGIDFKIRTIELDGKR 58
Query: 74 VRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGE-IPT 132
V+L +WDTAGQE F IT AYYRGA ++ + D SF +W VE E +
Sbjct: 59 VKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRTWFSNVEQHATEGVNK 118
Query: 133 VLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYL 181
+L+ NK D ++ V+ E+ L+ LG + S K +INV+ F L
Sbjct: 119 ILIGNKCDWEEKRAVSTEQGQALADELGIPFLEVSAKSNINVDKAFYSL 167
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 31/50 (62%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
+G+ V+L +WDTAGQE F IT AYYRGA ++ + D SF +W
Sbjct: 55 DGKRVKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRTW 104
>gi|159490221|ref|XP_001703081.1| small rab-related GTPase [Chlamydomonas reinhardtii]
gi|158270827|gb|EDO96660.1| small rab-related GTPase [Chlamydomonas reinhardtii]
Length = 218
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 87/175 (49%), Gaps = 7/175 (4%)
Query: 23 EFDAITKAYYRG----AQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLML 78
+FDA+ K G ++C++ T D F ++ + + K + EG+ V+L +
Sbjct: 8 DFDALIKLLLVGDSGVGKSCLLLRFT--DDMFTSSFITTIGIDFKIKKVDVEGKLVKLQI 65
Query: 79 WDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGE-IPTVLVQN 137
WDTAGQE F IT AYYRGAQ ++ + D SF +W +E + + +LV N
Sbjct: 66 WDTAGQERFRTITSAYYRGAQGIILVYDITDEGSFNNVRNWMRNIEQHASDNVNKILVGN 125
Query: 138 KIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSELRQQ 192
K+DL ++ VV+ L+ G R TS K+++ V F + L ++ +
Sbjct: 126 KLDLSEKRVVSEARGRALADEYGFRFFETSAKDNVCVEEAFLSVAKDVLHRMQGE 180
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 41/85 (48%), Gaps = 19/85 (22%)
Query: 6 CEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW--------- 56
EG+ V+L +WDTAGQE F IT AYYRGAQ ++ + D SF +W
Sbjct: 56 VEGKLVKLQIWDTAGQERFRTITSAYYRGAQGIILVYDITDEGSFNNVRNWMRNIEQHAS 115
Query: 57 ----------KMKVSIKRTIKECEG 71
K+ +S KR + E G
Sbjct: 116 DNVNKILVGNKLDLSEKRVVSEARG 140
>gi|403358406|gb|EJY78849.1| RAS small GTpases RIC1/ypt1, putative [Oxytricha trifallax]
Length = 208
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/127 (37%), Positives = 72/127 (56%), Gaps = 2/127 (1%)
Query: 64 RTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 123
RTI E +G+ ++L +WDTAGQE F IT +YY+GA ++T+ DR+SF A +W +V
Sbjct: 48 RTI-EVDGKTIKLQIWDTAGQERFKTITSSYYKGAHGIIVTYDITDRESFSAIENWMNEV 106
Query: 124 ENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLT 182
E + I +LV NK D+ D V+ +E L+ R + TS K+ NV F +T
Sbjct: 107 EKHASDNISRILVGNKSDMEDARQVSTDEGKELAEHYNVRFLETSAKDCKNVEEAFTMMT 166
Query: 183 TKCLSEL 189
+ S +
Sbjct: 167 REIKSRV 173
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 37/55 (67%)
Query: 6 CEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 60
+G+ ++L +WDTAGQE F IT +YY+GA ++T+ DR+SF A +W +V
Sbjct: 52 VDGKTIKLQIWDTAGQERFKTITSSYYKGAHGIIVTYDITDRESFSAIENWMNEV 106
>gi|410922303|ref|XP_003974622.1| PREDICTED: ras-related protein Rab-35-like [Takifugu rubripes]
Length = 201
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 72/142 (50%), Gaps = 5/142 (3%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
++F ++ + V K E GE+V+L +WDTAGQE F IT YYRG ++ +
Sbjct: 31 NTFSGSYITTIGVDFKIRTVEINGEKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDV 90
Query: 108 IDRDSFEAAHSWKMKVENECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTS 167
+SF W ++ C ++ +LV NK D + VV +A + +G L TS
Sbjct: 91 TSAESFVNVKRWLHEINQNCDDVCRILVGNKNDDPNSKVVETTDAQKFAEQMGINLFETS 150
Query: 168 VKEDINVNSIFRYLTTKCLSEL 189
KE++NV +F C++EL
Sbjct: 151 AKENLNVEEMF-----NCITEL 167
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 28/49 (57%)
Query: 8 GEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
GE+V+L +WDTAGQE F IT YYRG ++ + +SF W
Sbjct: 54 GEKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRW 102
>gi|320590560|gb|EFX03003.1| rab GTPase [Grosmannia clavigera kw1407]
Length = 205
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 81/171 (47%), Gaps = 9/171 (5%)
Query: 19 AGQEEFDAITKAYYRGAQA-----CVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEE 73
AG +D + K G C++ FS DSF + + + K E +G+
Sbjct: 2 AGNRNYDFLIKLLLIGDSGVGKSCCLLRFS---EDSFTPSFITTIGIDFKIRTIELDGKR 58
Query: 74 VRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGE-IPT 132
V+L +WDTAGQE F IT AYYRGA ++ + D SF +W VE E +
Sbjct: 59 VKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRTWFSNVEQHATEGVNK 118
Query: 133 VLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLTT 183
+L+ NK D ++ V++ E L+ LG + S K IN++ F L +
Sbjct: 119 ILIGNKCDWEEKRVISTERGQQLADELGIPFLEVSAKSGINIDKAFYNLAS 169
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 31/50 (62%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
+G+ V+L +WDTAGQE F IT AYYRGA ++ + D SF +W
Sbjct: 55 DGKRVKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRTW 104
>gi|307949529|gb|ADN96600.1| Rab GTPase 2d [Euplotes octocarinatus]
Length = 217
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 91/182 (50%), Gaps = 15/182 (8%)
Query: 35 AQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAY 94
++C++ T R F++ H + V + + ++L +WDTAGQE F +IT++Y
Sbjct: 21 GKSCLLLQFTDKR--FKSTHDLTIGVEFGSRTVQINDKAIKLQIWDTAGQESFRSITRSY 78
Query: 95 YRGAQACVITFSTIDRDSFEAAHSW--KMKVENECGEIPTVLVQNKIDLLDQSVVAPEEA 152
YRG+ ++ + R SFE W +MK EN ++ T+L+ NKIDL ++ V+ EE
Sbjct: 79 YRGSIGALLVYDVTKRQSFENLQKWLEEMK-ENAYSKMTTILIGNKIDLENERQVSYEEG 137
Query: 153 DLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSELRQQEEEYSIN--------GNGLP 204
++ TS K NV F +T K + L + EY+I+ GN LP
Sbjct: 138 QAFAKKHDLVFFETSAKSAHNVEKAFLAITQKIYTNL--ENGEYNIHKESIGIKPGNTLP 195
Query: 205 PY 206
Y
Sbjct: 196 TY 197
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 30/46 (65%)
Query: 11 VRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
++L +WDTAGQE F +IT++YYRG+ ++ + R SFE W
Sbjct: 58 IKLQIWDTAGQESFRSITRSYYRGSIGALLVYDVTKRQSFENLQKW 103
>gi|290999034|ref|XP_002682085.1| rab family small GTPase [Naegleria gruberi]
gi|284095711|gb|EFC49341.1| rab family small GTPase [Naegleria gruberi]
Length = 236
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/127 (37%), Positives = 71/127 (55%), Gaps = 2/127 (1%)
Query: 64 RTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 123
RTI E +G+ V+L +WDTAGQE F IT AYYRGA ++T+ D SF +W +
Sbjct: 57 RTI-ELDGKRVKLQIWDTAGQERFRTITTAYYRGAMGIMLTYDVTDEQSFLNIRNWMKNI 115
Query: 124 ENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLT 182
E + + +L+ NK DL+++ +V E L+++ G M TS K +INV F +
Sbjct: 116 EEHAADNVNKMLIGNKCDLIEKKIVETERGQSLAKSYGIPFMETSAKNNINVEEAFFTIA 175
Query: 183 TKCLSEL 189
+ S L
Sbjct: 176 REIKSRL 182
>gi|449296903|gb|EMC92922.1| hypothetical protein BAUCODRAFT_151311 [Baudoinia compniacensis
UAMH 10762]
Length = 208
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 80/171 (46%), Gaps = 9/171 (5%)
Query: 19 AGQEEFDAITKAYY-----RGAQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEE 73
AG +D + K G C++ FS DSF + + + K E +G+
Sbjct: 2 AGTRNYDFLIKLLLIGDSGVGKSCCLLRFS---EDSFTPSFITTIGIDFKIRTIELDGKR 58
Query: 74 VRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGE-IPT 132
V+L +WDTAGQE F IT AYYRGA ++ + D SF +W VE E +
Sbjct: 59 VKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDEKSFNNIRTWFSNVEQHASEGVNK 118
Query: 133 VLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLTT 183
+L+ NK D ++ V+ E+ L+ L M S K +INV F L +
Sbjct: 119 ILIGNKCDWEEKRAVSTEQGQQLANELNIPFMEVSAKSNINVEKAFFSLAS 169
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 31/50 (62%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
+G+ V+L +WDTAGQE F IT AYYRGA ++ + D SF +W
Sbjct: 55 DGKRVKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDEKSFNNIRTW 104
>gi|261188123|ref|XP_002620478.1| GTP-binding protein SAS1 [Ajellomyces dermatitidis SLH14081]
gi|239593353|gb|EEQ75934.1| GTP-binding protein SAS1 [Ajellomyces dermatitidis SLH14081]
Length = 205
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 81/171 (47%), Gaps = 9/171 (5%)
Query: 19 AGQEEFDAITKAYYRGAQA-----CVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEE 73
AG +D + K G C++ FS DSF + + + K E +G+
Sbjct: 2 AGTRNYDFLIKLLLIGDSGVGKSCCLLRFS---EDSFTPSFITTIGIDFKIRTIELDGKR 58
Query: 74 VRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGE-IPT 132
V+L +WDTAGQE F IT AYYRGA ++ + D SF +W VE E +
Sbjct: 59 VKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRTWFSNVEQHASEGVHK 118
Query: 133 VLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLTT 183
+L+ NK D ++ V+ E+ L+ LG + S K +INV F L +
Sbjct: 119 MLIGNKCDWEEKRAVSTEQGQQLANELGIPFLEVSAKNNINVEKAFYTLAS 169
>gi|348522271|ref|XP_003448649.1| PREDICTED: ras-related protein Rab-35-like [Oreochromis niloticus]
Length = 201
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 72/142 (50%), Gaps = 5/142 (3%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
++F ++ + V K E GE+V+L +WDTAGQE F IT YYRG ++ +
Sbjct: 31 NTFSGSYITTIGVDFKIRTVEINGEKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDV 90
Query: 108 IDRDSFEAAHSWKMKVENECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTS 167
+SF W ++ C ++ +LV NK D + VV +A + +G L TS
Sbjct: 91 TSAESFVNVKRWLHEINQNCDDVCRILVGNKNDDPNSKVVETTDAQKFAEQMGISLFETS 150
Query: 168 VKEDINVNSIFRYLTTKCLSEL 189
KE++NV +F C++EL
Sbjct: 151 AKENVNVEEMFN-----CITEL 167
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 28/49 (57%)
Query: 8 GEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
GE+V+L +WDTAGQE F IT YYRG ++ + +SF W
Sbjct: 54 GEKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRW 102
>gi|405964668|gb|EKC30125.1| Ras-related protein Rab-8A [Crassostrea gigas]
Length = 207
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 87/163 (53%), Gaps = 6/163 (3%)
Query: 48 DSFEAAHSWKMKVSIK-RTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFS 106
D+F + + + K RTI E +G++++L +WDTAGQE F IT AYYRGA ++ +
Sbjct: 31 DAFNSTFISTIGIDFKIRTI-ELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYD 89
Query: 107 TIDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMR 165
+ SFE +W +E + + +++ NK D+ D+ VV+ E+ + L+ G + M
Sbjct: 90 ITNEKSFENIRNWIRNIEEHASQDVDKMILGNKCDMNDKRVVSKEKGEALAIEHGIKFME 149
Query: 166 TSVKEDINVNSIFRYLTTKCLSELRQQEEEYSI---NGNGLPP 205
TS K INV F L +++ ++ E + N G+ P
Sbjct: 150 TSAKASINVEDAFFTLARDIKAKMDRKLESSNAQAKNAGGITP 192
>gi|348505868|ref|XP_003440482.1| PREDICTED: ras-related protein Rab-8B-like [Oreochromis niloticus]
Length = 207
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 79/158 (50%), Gaps = 1/158 (0%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
DSF + + K E +G+ V+L +WDTAGQE F IT AYYRGA ++ +
Sbjct: 31 DSFNTTFISTIGIDFKIRTIELDGKRVKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDI 90
Query: 108 IDRDSFEAAHSWKMKV-ENECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
+ SFE +W + E+ ++ +++ NK D+ D+ V+ + + L+ G + + T
Sbjct: 91 CNEKSFENIKNWIRNIEEHASSDVEKMILGNKCDMTDRRQVSKDRGEKLAIDYGVKFLET 150
Query: 167 SVKEDINVNSIFRYLTTKCLSELRQQEEEYSINGNGLP 204
S K +NV F + L L + + S G+G P
Sbjct: 151 SAKSGLNVEEAFYTMGRDILHNLSSKSTDNSAGGSGKP 188
>gi|324518786|gb|ADY47204.1| Ras-related protein Rab-10 [Ascaris suum]
Length = 200
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 78/148 (52%), Gaps = 1/148 (0%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
D+F + + + K E G+ ++L +WDTAGQE F IT +YYRGA V+ +
Sbjct: 31 DAFSPTYISTIGIDFKIKTIEVRGKRIKLQIWDTAGQERFHTITTSYYRGAMGIVVVYDI 90
Query: 108 IDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
D SF+ W +E E + +L+ NK D++++ V+ E + +++A G + + T
Sbjct: 91 TDEGSFDNIAKWLRYIELHASEDVQKILLANKCDVIERRAVSSERGEKIAKAHGIKFLET 150
Query: 167 SVKEDINVNSIFRYLTTKCLSELRQQEE 194
S + +IN+ F L L+++ E+
Sbjct: 151 SARSNINIQKAFGDLAEAILNKVTGDEQ 178
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 30/49 (61%)
Query: 8 GEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
G+ ++L +WDTAGQE F IT +YYRGA V+ + D SF+ W
Sbjct: 54 GKRIKLQIWDTAGQERFHTITTSYYRGAMGIVVVYDITDEGSFDNIAKW 102
>gi|67541621|ref|XP_664578.1| hypothetical protein AN6974.2 [Aspergillus nidulans FGSC A4]
gi|40742430|gb|EAA61620.1| hypothetical protein AN6974.2 [Aspergillus nidulans FGSC A4]
gi|259483720|tpe|CBF79342.1| TPA: Rab GTPase SrgA (Eurofung) [Aspergillus nidulans FGSC A4]
Length = 206
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 81/171 (47%), Gaps = 9/171 (5%)
Query: 19 AGQEEFDAITKAYYRGAQA-----CVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEE 73
AG +D + K G C++ FS DSF + + + K E +G+
Sbjct: 2 AGTRNYDFLIKLLLIGDSGVGKSCCLLRFS---EDSFTPSFITTIGIDFKIRTIELDGKR 58
Query: 74 VRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGE-IPT 132
V+L +WDTAGQE F IT AYYRGA ++ + D SF+ +W VE E +
Sbjct: 59 VKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFQNIRTWFSNVEQHASEGVHK 118
Query: 133 VLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLTT 183
+L+ NK D ++ V E+ L+ LG + S K +IN+ F L +
Sbjct: 119 ILIGNKCDWEEKRAVTTEQGQQLADELGIPFLEVSAKNNINIEKAFYNLAS 169
>gi|41152205|ref|NP_958486.1| ras-related protein Rab-13 [Danio rerio]
gi|31419201|gb|AAH53195.1| RAB13, member RAS oncogene family [Danio rerio]
Length = 200
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 77/154 (50%), Gaps = 4/154 (2%)
Query: 34 GAQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKA 93
G +I F+ D+F + + + + K E EG++V+L +WDTAGQE F IT A
Sbjct: 20 GKTCLIIRFA---EDNFNSTYISTIGIDFKVKTIEVEGKKVKLQVWDTAGQERFKTITTA 76
Query: 94 YYRGAQACVITFSTIDRDSFEAAHSWKMKV-ENECGEIPTVLVQNKIDLLDQSVVAPEEA 152
YYRGA ++ + D S+E +W + EN + +L+ NK D+ + V+ E
Sbjct: 77 YYRGAMGIILVYDITDEKSYENIQNWMKSIKENASAGVSRMLLGNKCDIEAKRKVSKETG 136
Query: 153 DLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCL 186
+ L++ G R TS K INV F L L
Sbjct: 137 EKLAKEHGIRFFETSAKSSINVEESFTSLARDIL 170
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 41/73 (56%), Gaps = 6/73 (8%)
Query: 6 CEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVSIKRT 65
EG++V+L +WDTAGQE F IT AYYRGA ++ + D S+E +W ++
Sbjct: 52 VEGKKVKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSYENIQNW------MKS 105
Query: 66 IKECEGEEVRLML 78
IKE V ML
Sbjct: 106 IKENASAGVSRML 118
>gi|357122771|ref|XP_003563088.1| PREDICTED: GTP-binding protein YPTM2-like [Brachypodium distachyon]
Length = 203
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/146 (33%), Positives = 75/146 (51%), Gaps = 1/146 (0%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
DS+ ++ + V K E +G+ ++L +WDTAGQE F IT +YYRGA +I +
Sbjct: 31 DSYLESYISTIGVDFKIRTVEQDGKTMKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDV 90
Query: 108 IDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
D+DSF W +++ E + +LV NK DL D+ VV+ E A + +G M T
Sbjct: 91 TDQDSFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKRVVSYETAKAFADEIGIPFMET 150
Query: 167 SVKEDINVNSIFRYLTTKCLSELRQQ 192
S K +NV F ++ + Q
Sbjct: 151 SAKNALNVEQAFMAMSASIKDRMASQ 176
>gi|198430272|ref|XP_002128387.1| PREDICTED: similar to Rab35 [Ciona intestinalis]
Length = 203
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 81/158 (51%), Gaps = 5/158 (3%)
Query: 48 DSFEAAHSWKMKVSIK-RTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFS 106
++F ++ + V K RTI E GE+V+L +WDTAGQE F IT YYRG ++ +
Sbjct: 31 NTFSGSYITTIGVDFKIRTI-EIGGEKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYD 89
Query: 107 TIDRDSFEAAHSWKMKVENECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
+SF W ++E C + +LV NK D ++ VV +A S + L T
Sbjct: 90 VQSAESFVNVKRWLHEIEQNCDSVNRILVGNKDDCAEKKVVETADAKKFSDQINITLFET 149
Query: 167 SVKEDINVNSIFRYLTTKCLSELRQQEEEYSINGNGLP 204
S KE+ N+ +F +T + LR ++ + +G G P
Sbjct: 150 SAKENKNIEEMFTEITRQV---LRTKQNSQNQSGAGQP 184
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 28/49 (57%)
Query: 8 GEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
GE+V+L +WDTAGQE F IT YYRG ++ + +SF W
Sbjct: 54 GEKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVQSAESFVNVKRW 102
>gi|440298637|gb|ELP91268.1| GTP-binding protein YPTM1, putative [Entamoeba invadens IP1]
Length = 207
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 77/145 (53%), Gaps = 3/145 (2%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
++FE + + V K + + + V++ LWDTAGQ+ F IT +YYRG Q +I +
Sbjct: 32 NTFEPVYISTVGVDFKPKVIKVGNKTVKMQLWDTAGQDRFRNITASYYRGTQGVLIVYDI 91
Query: 108 IDRDSFEAAHSWKMKVENECGEIPTV--LVQNKIDLLDQSVVAPEEADLLSRAL-GCRLM 164
DR SF+ SW +V + P V LV NK DL+D + V E + L+R L G +
Sbjct: 92 TDRASFDKVSSWFTEVRDRTENDPPVIILVGNKTDLMDHAAVKQEAVEQLARQLGGVQTF 151
Query: 165 RTSVKEDINVNSIFRYLTTKCLSEL 189
S K+ ++ +F LT +S++
Sbjct: 152 TCSAKDGSGIDDVFNALTQSIISKV 176
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 32/50 (64%)
Query: 11 VRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 60
V++ LWDTAGQ+ F IT +YYRG Q +I + DR SF+ SW +V
Sbjct: 58 VKMQLWDTAGQDRFRNITASYYRGTQGVLIVYDITDRASFDKVSSWFTEV 107
>gi|294949450|ref|XP_002786203.1| RAS small GTpases RIC1/ypt1, putative [Perkinsus marinus ATCC
50983]
gi|239900360|gb|EER17999.1| RAS small GTpases RIC1/ypt1, putative [Perkinsus marinus ATCC
50983]
Length = 205
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 76/144 (52%), Gaps = 1/144 (0%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
D++ ++ + V K E +G+ V+L +WDTAGQE F IT +YYRGA +I +
Sbjct: 31 DTYTESYISTIGVDFKIRTIELDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDV 90
Query: 108 IDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
DR+SF W +++ E + +LV NK DL + VV +E L+ LG + T
Sbjct: 91 TDRESFNNVKHWVQEIDKYATENVSKLLVGNKTDLTSKKVVTYDEGKELADQLGVPFLET 150
Query: 167 SVKEDINVNSIFRYLTTKCLSELR 190
S K NV F ++++ S ++
Sbjct: 151 SAKNSHNVEQAFIEMSSEIKSRVK 174
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 32/50 (64%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
+G+ V+L +WDTAGQE F IT +YYRGA +I + DR+SF W
Sbjct: 53 DGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDRESFNNVKHW 102
>gi|348526868|ref|XP_003450941.1| PREDICTED: ras-related protein Rab-13-like [Oreochromis niloticus]
Length = 200
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 78/156 (50%), Gaps = 4/156 (2%)
Query: 34 GAQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKA 93
G +I F+ D+F + + + + K E +G++V+L +WDTAGQE F IT A
Sbjct: 20 GKTCLIIRFA---EDNFNSTYISTIGIDFKVKTIEVDGKKVKLQVWDTAGQERFKTITTA 76
Query: 94 YYRGAQACVITFSTIDRDSFEAAHSWKMKV-ENECGEIPTVLVQNKIDLLDQSVVAPEEA 152
YYRGA ++ + D SFE +W + EN + +L+ NK D+ + V+ E
Sbjct: 77 YYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVSRMLLGNKCDIEAKRKVSKETG 136
Query: 153 DLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSE 188
+ L++ G R TS K INV F L L +
Sbjct: 137 EKLAKDHGIRFFETSAKSSINVEESFLALARDILKQ 172
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 41/73 (56%), Gaps = 6/73 (8%)
Query: 6 CEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVSIKRT 65
+G++V+L +WDTAGQE F IT AYYRGA ++ + D SFE +W ++
Sbjct: 52 VDGKKVKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNW------MKS 105
Query: 66 IKECEGEEVRLML 78
IKE V ML
Sbjct: 106 IKENASAGVSRML 118
>gi|255710579|ref|XP_002551573.1| KLTH0A02662p [Lachancea thermotolerans]
gi|238932950|emb|CAR21131.1| KLTH0A02662p [Lachancea thermotolerans CBS 6340]
Length = 213
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 89/183 (48%), Gaps = 9/183 (4%)
Query: 11 VRLMLWDTAGQEEFDAITKAYYRG----AQACVITFSTIDRDSFEAAHSWKMKVSIKRTI 66
VR + +A + +D+I K G ++C++ D F + + + K
Sbjct: 4 VRTVSSSSANAKSYDSIMKILLVGDSGVGKSCLLV--RFVEDKFSPSFITTIGIDFKIKT 61
Query: 67 KECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENE 126
+ G++V+L LWDTAGQE F IT AYYRGA ++ + D +F W V
Sbjct: 62 VDINGKKVKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFSNIKQWFSTVNQH 121
Query: 127 CG-EIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLTTKC 185
E +LV NK D +D V+ ++ + L++ LG + S K+D NVN IF +L K
Sbjct: 122 ANDEAQLLLVGNKSD-MDTRAVSTDQGEALAKELGIPFVEASAKDDTNVNDIF-FLLAKL 179
Query: 186 LSE 188
+ E
Sbjct: 180 IQE 182
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 39/72 (54%), Gaps = 6/72 (8%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVSIKRTI 66
G++V+L LWDTAGQE F IT AYYRGA ++ + D +F W T+
Sbjct: 65 NGKKVKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFSNIKQW------FSTV 118
Query: 67 KECEGEEVRLML 78
+ +E +L+L
Sbjct: 119 NQHANDEAQLLL 130
>gi|387017964|gb|AFJ51100.1| ras-related protein Rab-35-like [Crotalus adamanteus]
Length = 202
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 76/159 (47%), Gaps = 7/159 (4%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
++F ++ + V K GE V+L +WDTAGQE F IT YYR +I +
Sbjct: 32 NTFSGSYITTIGVDFKIRTLVINGERVKLQIWDTAGQERFRTITSTYYRNTHGVIIVYDV 91
Query: 108 IDRDSFEAAHSWKMKVENECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTS 167
+ +SF W ++ C + +LV NK + L + V +A S +G RL TS
Sbjct: 92 TNAESFVNVKRWLHEIGQNCDNVCKILVGNKCEDLSRKQVETADARRFSEQMGVRLFETS 151
Query: 168 VKEDINVNSIFRYLTTKC-------LSELRQQEEEYSIN 199
KE++NV +F +TT L+ +QQ E IN
Sbjct: 152 AKENLNVEEMFNAITTMVLRTKQENLARRQQQNEVVKIN 190
>gi|291407058|ref|XP_002719864.1| PREDICTED: RAB35, member RAS oncogene family-like [Oryctolagus
cuniculus]
Length = 599
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 75/142 (52%), Gaps = 5/142 (3%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
++F ++ + V K E GE+V+L +WDTAGQE F IT YYRG ++ +
Sbjct: 429 NTFSGSYITTIGVDFKIRTVEINGEKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDV 488
Query: 108 IDRDSFEAAHSWKMKVENECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTS 167
+SF W ++ C ++ +LV NK D ++ VV E+A + +G +L TS
Sbjct: 489 TSAESFVNVKRWLHEINQNCDDVCRILVGNKNDDPERKVVETEDAYKFAGQMGIQLFETS 548
Query: 168 VKEDINVNSIFRYLTTKCLSEL 189
KE++NV +F C++EL
Sbjct: 549 AKENVNVEEMF-----NCITEL 565
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 28/49 (57%)
Query: 8 GEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
GE+V+L +WDTAGQE F IT YYRG ++ + +SF W
Sbjct: 452 GEKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRW 500
>gi|2245111|emb|CAB10533.1| GTP-binding RAB1C like protein [Arabidopsis thaliana]
Length = 221
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 77/159 (48%), Gaps = 6/159 (3%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
DS+ ++ + V K E +G+ ++L +WDTAGQE F IT +YYRGA ++T+
Sbjct: 50 DSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVTYDV 109
Query: 108 IDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
D +SF W +++ E + +LV NK DL Q VV+ E A + LG + T
Sbjct: 110 TDLESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTSQKVVSTETAKAFADELGIPFLET 169
Query: 167 SVKEDINVNSIFRYLTTKCLSELRQQEEEYSINGNGLPP 205
S K NV F +T + + Q G PP
Sbjct: 170 SAKNATNVEEAFMAMTAAIKTRMASQPA-----GGSKPP 203
>gi|229596300|ref|XP_001011511.3| Ras family protein [Tetrahymena thermophila]
gi|225565488|gb|EAR91266.3| Ras family protein [Tetrahymena thermophila SB210]
gi|307777758|dbj|BAJ21275.1| Rab-family small GTPase Rab1B [Tetrahymena thermophila]
Length = 212
Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 75/129 (58%), Gaps = 4/129 (3%)
Query: 70 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGE 129
+G++++L +WDTAGQ+ F IT YYRGA V+ + D+ SFE +W ++E E
Sbjct: 61 QGKQIKLQIWDTAGQDRFKTITTNYYRGAHGIVVVYDVTDKLSFENVKTWMSEIEKYAQE 120
Query: 130 -IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCL-- 186
+ +L+ NK DL D+ VV+ EE L+ +L + + TS K N++S F + L
Sbjct: 121 NVCKLLIGNKSDLSDKRVVSTEEGQQLASSLKIKFIETSAKNSNNIDSAFESMAQDVLIR 180
Query: 187 -SELRQQEE 194
S+++ Q++
Sbjct: 181 ISDIKTQQD 189
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 60/125 (48%), Gaps = 24/125 (19%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW---------- 56
+G++++L +WDTAGQ+ F IT YYRGA V+ + D+ SFE +W
Sbjct: 61 QGKQIKLQIWDTAGQDRFKTITTNYYRGAHGIVVVYDVTDKLSFENVKTWMSEIEKYAQE 120
Query: 57 ---------KMKVSIKRTIKECEGEE----VRLMLWDTAGQEEFDAITKAYYRGAQACVI 103
K +S KR + EG++ +++ +T+ + + I A+ AQ +I
Sbjct: 121 NVCKLLIGNKSDLSDKRVVSTEEGQQLASSLKIKFIETSAKNS-NNIDSAFESMAQDVLI 179
Query: 104 TFSTI 108
S I
Sbjct: 180 RISDI 184
>gi|29789271|ref|NP_112354.1| ras-related protein Rab-13 [Rattus norvegicus]
gi|46577668|sp|P35286.2|RAB13_RAT RecName: Full=Ras-related protein Rab-13; Flags: Precursor
gi|21952483|gb|AAM82588.1|AF525280_1 GTP-binding protein RAB13 [Rattus norvegicus]
gi|149048004|gb|EDM00580.1| RAB13, member RAS oncogene family, isoform CRA_a [Rattus
norvegicus]
Length = 203
Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 77/154 (50%), Gaps = 4/154 (2%)
Query: 34 GAQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKA 93
G +I F+ D+F + + + + K E EG+ ++L +WDTAGQE F IT A
Sbjct: 20 GKTCLIIRFA---EDNFNSTYISTIGIDFKIRTVEIEGKRIKLQVWDTAGQERFKTITTA 76
Query: 94 YYRGAQACVITFSTIDRDSFEAAHSWKMKV-ENECGEIPTVLVQNKIDLLDQSVVAPEEA 152
YYRGA ++ + D SFE +W + EN + +L+ NK D+ + V E+A
Sbjct: 77 YYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCDMEAKRKVQREQA 136
Query: 153 DLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCL 186
+ L+R R TS K +NV+ F L L
Sbjct: 137 ERLAREHRIRFFETSAKSSVNVDEAFSSLARDIL 170
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 43/75 (57%), Gaps = 7/75 (9%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVSIKRTI 66
EG+ ++L +WDTAGQE F IT AYYRGA ++ + D SFE +W ++I
Sbjct: 53 EGKRIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNW------MKSI 106
Query: 67 KECEGEEV-RLMLWD 80
KE V RL+L +
Sbjct: 107 KENASAGVERLLLGN 121
>gi|330797350|ref|XP_003286724.1| Rab GTPase [Dictyostelium purpureum]
gi|325083322|gb|EGC36778.1| Rab GTPase [Dictyostelium purpureum]
Length = 205
Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 70/132 (53%), Gaps = 1/132 (0%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
DS+ H + V K +G+ ++L +WDTAGQE F IT +YYRGAQ ++ +
Sbjct: 33 DSWTDTHISTIGVDFKIKTLNLDGKTIKLQIWDTAGQERFRTITSSYYRGAQGIILVYDC 92
Query: 108 IDRDSFEAAHSWKMKVEN-ECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
D+DSF W ++E C + +LV NK DL+++ VV +A + ++G + T
Sbjct: 93 TDQDSFNNVKQWMGEIERYACENVNKLLVGNKTDLVNEKVVDSNQAKSFAESMGIPFIET 152
Query: 167 SVKEDINVNSIF 178
S K NV F
Sbjct: 153 SAKNATNVEECF 164
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 33/50 (66%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
+G+ ++L +WDTAGQE F IT +YYRGAQ ++ + D+DSF W
Sbjct: 55 DGKTIKLQIWDTAGQERFRTITSSYYRGAQGIILVYDCTDQDSFNNVKQW 104
>gi|301774282|ref|XP_002922543.1| PREDICTED: ras-related protein Rab-13-like [Ailuropoda melanoleuca]
gi|281350220|gb|EFB25804.1| hypothetical protein PANDA_011544 [Ailuropoda melanoleuca]
Length = 203
Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 76/154 (49%), Gaps = 4/154 (2%)
Query: 34 GAQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKA 93
G +I F+ DSF + + + K + EG++++L +WDTAGQE F IT A
Sbjct: 20 GKTCLIIRFA---EDSFNNTYISTIGIDFKIRTVDVEGKKIKLQVWDTAGQERFKTITTA 76
Query: 94 YYRGAQACVITFSTIDRDSFEAAHSWKMKV-ENECGEIPTVLVQNKIDLLDQSVVAPEEA 152
YYRGA ++ + D SFE +W + EN + +L+ NK D+ + V E+A
Sbjct: 77 YYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCDMEAKRKVQKEQA 136
Query: 153 DLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCL 186
L+R G R TS K NV+ F L L
Sbjct: 137 VKLAREHGIRFFETSAKSSTNVDEAFSSLARDIL 170
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 44/75 (58%), Gaps = 7/75 (9%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVSIKRTI 66
EG++++L +WDTAGQE F IT AYYRGA ++ + D SFE +W ++I
Sbjct: 53 EGKKIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNW------MKSI 106
Query: 67 KECEGEEV-RLMLWD 80
KE V RL+L +
Sbjct: 107 KENASAGVERLLLGN 121
>gi|281341492|gb|EFB17076.1| hypothetical protein PANDA_020355 [Ailuropoda melanoleuca]
Length = 168
Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/126 (36%), Positives = 71/126 (56%), Gaps = 6/126 (4%)
Query: 64 RTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 123
RT+ E +GE+V+L +WDTAGQE F IT YYRG ++ + +SF W ++
Sbjct: 15 RTV-EIDGEKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEI 73
Query: 124 ENECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLTT 183
C ++ +LV NK D ++ VV E+A + +G +L TS KE++NV +F
Sbjct: 74 NQNCDDVCRILVGNKNDDPERKVVETEDAYKFAGQMGIQLFETSAKENVNVEEMF----- 128
Query: 184 KCLSEL 189
C++EL
Sbjct: 129 NCITEL 134
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 29/50 (58%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
+GE+V+L +WDTAGQE F IT YYRG ++ + +SF W
Sbjct: 20 DGEKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRW 69
>gi|297833530|ref|XP_002884647.1| hypothetical protein ARALYDRAFT_896904 [Arabidopsis lyrata subsp.
lyrata]
gi|297330487|gb|EFH60906.1| hypothetical protein ARALYDRAFT_896904 [Arabidopsis lyrata subsp.
lyrata]
Length = 217
Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 70/138 (50%), Gaps = 1/138 (0%)
Query: 42 FSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQAC 101
S RD F+ + V + + E EG+EV+ +WDTAGQE F A+T AYYRGA
Sbjct: 29 LSRFSRDEFDTNSKATIGVEFQTQLVEIEGKEVKAQIWDTAGQERFRAVTSAYYRGAFGA 88
Query: 102 VITFSTIDRDSFEAAHSWKMKVENECG-EIPTVLVQNKIDLLDQSVVAPEEADLLSRALG 160
+I + D+FE+ W ++ C + +LV NK DL D V+ EE L+ G
Sbjct: 89 LIVYDITRSDTFESVKRWLQELNTHCDTAVAQMLVGNKCDLEDIRAVSVEEGKALAEEEG 148
Query: 161 CRLMRTSVKEDINVNSIF 178
M TS + NV+ F
Sbjct: 149 LFFMETSALDATNVDKAF 166
Score = 60.1 bits (144), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 33/50 (66%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
EG+EV+ +WDTAGQE F A+T AYYRGA +I + D+FE+ W
Sbjct: 57 EGKEVKAQIWDTAGQERFRAVTSAYYRGAFGALIVYDITRSDTFESVKRW 106
>gi|224043682|ref|XP_002187756.1| PREDICTED: ras-related protein Rab-30 [Taeniopygia guttata]
gi|363729400|ref|XP_417213.3| PREDICTED: ras-related protein Rab-30 [Gallus gallus]
gi|449271458|gb|EMC81819.1| Ras-related protein Rab-30 [Columba livia]
Length = 203
Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/144 (36%), Positives = 75/144 (52%), Gaps = 1/144 (0%)
Query: 50 FEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTID 109
F + V E GE+V+L +WDTAGQE F +IT++YYR A A ++T+
Sbjct: 34 FPPGQGATIGVDFMIKTVEINGEKVKLQIWDTAGQERFRSITQSYYRSANALILTYDITC 93
Query: 110 RDSFEAAHSWKMKVEN-ECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSV 168
+SF W ++E ++ TVLV NKIDL D+ V+ + A S A + TS
Sbjct: 94 EESFRCLPEWLREIEQYASNKVITVLVGNKIDLADKREVSQQRAAEFSEAQDMYYLETSA 153
Query: 169 KEDINVNSIFRYLTTKCLSELRQQ 192
KE NV +F L + +SE RQ
Sbjct: 154 KESDNVEKLFLDLACRLISEARQN 177
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 33/49 (67%)
Query: 8 GEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
GE+V+L +WDTAGQE F +IT++YYR A A ++T+ +SF W
Sbjct: 55 GEKVKLQIWDTAGQERFRSITQSYYRSANALILTYDITCEESFRCLPEW 103
>gi|16769388|gb|AAL28913.1| LD28840p [Drosophila melanogaster]
Length = 147
Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/133 (35%), Positives = 71/133 (53%), Gaps = 1/133 (0%)
Query: 74 VRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGEIPTV 133
V+L +WDTAGQE F IT YYRG ++ + + +SF W +++N C + V
Sbjct: 3 VKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTNGESFANVRRWLEEIQNNCDVVKKV 62
Query: 134 LVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLS-ELRQQ 192
LV NK D D+ VV E+A ++ + L TS K++INV ++F +T + L +LR
Sbjct: 63 LVGNKNDDPDRKVVITEDAQRFAKQMDIELFETSAKDNINVENMFLSITRQVLDHKLRTS 122
Query: 193 EEEYSINGNGLPP 205
E + L P
Sbjct: 123 PNEQQKDTLHLKP 135
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 26/46 (56%)
Query: 11 VRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
V+L +WDTAGQE F IT YYRG ++ + + +SF W
Sbjct: 3 VKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTNGESFANVRRW 48
>gi|268572557|ref|XP_002641352.1| C. briggsae CBR-RAB-35 protein [Caenorhabditis briggsae]
Length = 209
Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 72/140 (51%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
++F + + V K + G+ V+L +WDTAGQE F IT YYRG V+ +
Sbjct: 33 NTFSENYITTIGVDFKIRTMDINGQRVKLQIWDTAGQERFRTITSTYYRGTHGVVVVYDV 92
Query: 108 IDRDSFEAAHSWKMKVENECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTS 167
+ +SF W ++EN C + VLV NK + D+ VV +A ++++ TS
Sbjct: 93 TNGESFGNVKRWLQEIENNCDSVQKVLVGNKCEETDRRVVLESDARNYAQSMNIAFFETS 152
Query: 168 VKEDINVNSIFRYLTTKCLS 187
KED NV +F +T+ L+
Sbjct: 153 AKEDKNVEPMFTCITSLVLT 172
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 43/79 (54%), Gaps = 7/79 (8%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV-----S 61
G+ V+L +WDTAGQE F IT YYRG V+ + + +SF W ++ S
Sbjct: 55 NGQRVKLQIWDTAGQERFRTITSTYYRGTHGVVVVYDVTNGESFGNVKRWLQEIENNCDS 114
Query: 62 IKRTI--KECEGEEVRLML 78
+++ + +CE + R++L
Sbjct: 115 VQKVLVGNKCEETDRRVVL 133
>gi|196003794|ref|XP_002111764.1| conserved hypothetical protein [Trichoplax adhaerens]
gi|190585663|gb|EDV25731.1| conserved hypothetical protein [Trichoplax adhaerens]
Length = 216
Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 88/161 (54%), Gaps = 4/161 (2%)
Query: 48 DSFEAAHSWKMKVSIK-RTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFS 106
D+F + + + K RTI E +G++++L +WDTAGQE F IT AYYRGA ++ F
Sbjct: 31 DAFNSTFISTIGIDFKIRTI-ELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVFD 89
Query: 107 TIDRDSFEAAHSWKMKV-ENECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMR 165
+ SFE +W + E+ ++ +++ NK D++D+ V+ E+A L+ G +
Sbjct: 90 ITNERSFENIKTWIRNIEEHAASDVEKMILGNKCDVVDKRQVSKEQAQQLAAEYGVKFSE 149
Query: 166 TSVKEDINVNSIFRYLTTKCLSEL-RQQEEEYSINGNGLPP 205
TS K+ NV F L +++ R+Q+E + G+ P
Sbjct: 150 TSAKDGHNVEEAFMTLAKDIKAKMDRKQQENNNGGGSHSSP 190
>gi|167393508|ref|XP_001740606.1| hypothetical protein [Entamoeba dispar SAW760]
gi|165895241|gb|EDR22979.1| hypothetical protein, conserved [Entamoeba dispar SAW760]
Length = 208
Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 77/145 (53%), Gaps = 3/145 (2%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
++FE + + V K + + + V++ LWDTAGQ+ F IT +YYRG Q +I +
Sbjct: 32 NTFEPVYISTVGVDFKPKVIKVGNKTVKMQLWDTAGQDRFRNITASYYRGTQGVLIVYDV 91
Query: 108 IDRDSFEAAHSWKMKVENECGEIPTV--LVQNKIDLLDQSVVAPEEADLLSRAL-GCRLM 164
DR SF+ SW +V + P V LV NK DL+D + V E + L+R L G +
Sbjct: 92 TDRASFDKVSSWFTEVRDRTENDPPVIILVGNKTDLMDHAAVKQEAVEQLARQLGGVQTF 151
Query: 165 RTSVKEDINVNSIFRYLTTKCLSEL 189
S K+ ++ +F LT +S++
Sbjct: 152 TCSAKDGSGIDEVFNALTQAIISKV 176
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 30/46 (65%)
Query: 11 VRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
V++ LWDTAGQ+ F IT +YYRG Q +I + DR SF+ SW
Sbjct: 58 VKMQLWDTAGQDRFRNITASYYRGTQGVLIVYDVTDRASFDKVSSW 103
>gi|67473169|ref|XP_652352.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|56469191|gb|EAL46966.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|56790054|dbj|BAD82823.1| small GTPase EhRabC3 [Entamoeba histolytica]
gi|407043332|gb|EKE41887.1| Rab family GTPase [Entamoeba nuttalli P19]
gi|449702822|gb|EMD43384.1| small GTPase EhRabC3, putative [Entamoeba histolytica KU27]
Length = 208
Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 77/145 (53%), Gaps = 3/145 (2%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
++FE + + V K + + + V++ LWDTAGQ+ F IT +YYRG Q +I +
Sbjct: 32 NTFEPVYISTVGVDFKPKVIKVGNKTVKMQLWDTAGQDRFRNITASYYRGTQGVLIVYDV 91
Query: 108 IDRDSFEAAHSWKMKVENECGEIPTV--LVQNKIDLLDQSVVAPEEADLLSRAL-GCRLM 164
DR SF+ SW +V + P V LV NK DL+D + V E + L+R L G +
Sbjct: 92 TDRASFDKVSSWFTEVRDRTENDPPVIILVGNKTDLMDHAAVKQEAVEQLARQLGGVQTF 151
Query: 165 RTSVKEDINVNSIFRYLTTKCLSEL 189
S K+ ++ +F LT +S++
Sbjct: 152 TCSAKDGSGIDEVFNALTQAIISKV 176
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 30/46 (65%)
Query: 11 VRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
V++ LWDTAGQ+ F IT +YYRG Q +I + DR SF+ SW
Sbjct: 58 VKMQLWDTAGQDRFRNITASYYRGTQGVLIVYDVTDRASFDKVSSW 103
>gi|380020626|ref|XP_003694183.1| PREDICTED: ras-related protein Rab-3-like [Apis florea]
Length = 228
Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 71/135 (52%), Gaps = 1/135 (0%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
DSF +A + + K + V+L +WDTAGQE + IT AYYRGA ++ +
Sbjct: 49 DSFTSAFVSTVGIDFKVKTVFRHDKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDI 108
Query: 108 IDRDSFEAAHSWKMKVEN-ECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
+ +SF + W +++ C +LV NK D+ D+ V+ E L+ LG + T
Sbjct: 109 TNEESFNSVQDWVTQIKTYSCDNAQVILVGNKCDMEDERVITTERGKQLADQLGVQFFET 168
Query: 167 SVKEDINVNSIFRYL 181
S KE+IN+ ++F L
Sbjct: 169 SAKENINIKTVFEQL 183
>gi|15231462|ref|NP_187397.1| RAB GTPase-like protein A5B [Arabidopsis thaliana]
gi|75337573|sp|Q9SRS5.1|RAA5B_ARATH RecName: Full=Ras-related protein RABA5b; Short=AtRABA5b
gi|6041856|gb|AAF02165.1|AC009853_25 putative GTP-binding protein [Arabidopsis thaliana]
gi|18253019|gb|AAL62436.1| putative GTP-binding protein [Arabidopsis thaliana]
gi|25084141|gb|AAN72184.1| putative GTP-binding protein [Arabidopsis thaliana]
gi|332641018|gb|AEE74539.1| RAB GTPase-like protein A5B [Arabidopsis thaliana]
Length = 217
Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 70/138 (50%), Gaps = 1/138 (0%)
Query: 42 FSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQAC 101
S RD F+ + V + + E EG+EV+ +WDTAGQE F A+T AYYRGA
Sbjct: 29 LSRFSRDEFDTNSKATIGVEFQTQLVEIEGKEVKAQIWDTAGQERFRAVTSAYYRGAFGA 88
Query: 102 VITFSTIDRDSFEAAHSWKMKVENECG-EIPTVLVQNKIDLLDQSVVAPEEADLLSRALG 160
+I + D+FE+ W ++ C + +LV NK DL D V+ EE L+ G
Sbjct: 89 LIVYDITRGDTFESVKRWLQELNTHCDTAVAQMLVGNKCDLEDIRAVSVEEGKALAEEEG 148
Query: 161 CRLMRTSVKEDINVNSIF 178
M TS + NV+ F
Sbjct: 149 LFFMETSALDATNVDKAF 166
Score = 59.7 bits (143), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 33/50 (66%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
EG+EV+ +WDTAGQE F A+T AYYRGA +I + D+FE+ W
Sbjct: 57 EGKEVKAQIWDTAGQERFRAVTSAYYRGAFGALIVYDITRGDTFESVKRW 106
>gi|339522341|gb|AEJ84335.1| RAB30 [Capra hircus]
Length = 203
Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/143 (36%), Positives = 76/143 (53%), Gaps = 1/143 (0%)
Query: 50 FEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTID 109
F + V E GE+V+L +WDTAGQE F +IT++YYR A A ++T+
Sbjct: 34 FPPGQGATIGVDFMIKTVEINGEKVKLQIWDTAGQERFRSITQSYYRSANALILTYDITC 93
Query: 110 RDSFEAAHSWKMKVEN-ECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSV 168
+SF W ++E ++ TVLV NKIDL ++ V+ + A+ S A + TS
Sbjct: 94 EESFRCLPEWLREIEQYASNKVITVLVGNKIDLAERREVSQQRAEEFSEAQDMYYLETSA 153
Query: 169 KEDINVNSIFRYLTTKCLSELRQ 191
KE NV +F L + +SE RQ
Sbjct: 154 KESDNVEKLFLALACRLISEARQ 176
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 33/49 (67%)
Query: 8 GEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
GE+V+L +WDTAGQE F +IT++YYR A A ++T+ +SF W
Sbjct: 55 GEKVKLQIWDTAGQERFRSITQSYYRSANALILTYDITCEESFRCLPEW 103
>gi|395502635|ref|XP_003755684.1| PREDICTED: ras-related protein Rab-8B, partial [Sarcophilus
harrisii]
Length = 168
Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 79/142 (55%), Gaps = 2/142 (1%)
Query: 64 RTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 123
RTI E +G++++L +WDTAGQE F IT AYYRGA ++ + + SFE +W +
Sbjct: 9 RTI-ELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFENIKNWIRNI 67
Query: 124 -ENECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLT 182
E+ ++ +++ NK D+ D+ V+ E + L+ G + + TS K INV F L
Sbjct: 68 EEHASSDVERMILGNKSDMNDKRQVSKERGEKLAIDYGIKFLETSAKSSINVEEAFFTLA 127
Query: 183 TKCLSELRQQEEEYSINGNGLP 204
+++L ++ + + G G P
Sbjct: 128 RDIMTKLNRKMNDSNSPGTGGP 149
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 41/73 (56%), Gaps = 6/73 (8%)
Query: 6 CEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVSIKRT 65
+G++++L +WDTAGQE F IT AYYRGA ++ + + SFE +W R
Sbjct: 13 LDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFENIKNW------IRN 66
Query: 66 IKECEGEEVRLML 78
I+E +V M+
Sbjct: 67 IEEHASSDVERMI 79
>gi|225713348|gb|ACO12520.1| Ras-related protein Rab-35 [Lepeophtheirus salmonis]
gi|225713898|gb|ACO12795.1| Ras-related protein Rab-35 [Lepeophtheirus salmonis]
gi|290561314|gb|ADD38059.1| Ras-related protein Rab-35 [Lepeophtheirus salmonis]
Length = 223
Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 51/147 (34%), Positives = 73/147 (49%), Gaps = 3/147 (2%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
+SF + + V K E GE V+L +WDTAGQE F IT YYRG ++ +
Sbjct: 32 NSFTGNYITTIGVDFKIRTLEVNGERVKLQIWDTAGQERFRTITATYYRGTHGVIVVYDV 91
Query: 108 IDRDSFEAAHSWKMKVENECGE--IPTVLVQNKIDL-LDQSVVAPEEADLLSRALGCRLM 164
+ +SF W +++ C + VLV NK D + VV E+A S +G RL
Sbjct: 92 SNGESFANVKRWLHEIDQNCSSEVVSRVLVGNKNDGDTAKKVVLTEDAKRFSDQMGIRLF 151
Query: 165 RTSVKEDINVNSIFRYLTTKCLSELRQ 191
TS KE+ NV +F+ LT L ++
Sbjct: 152 ETSAKENFNVEEMFKSLTELVLKSKKE 178
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 28/49 (57%)
Query: 8 GEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
GE V+L +WDTAGQE F IT YYRG ++ + + +SF W
Sbjct: 55 GERVKLQIWDTAGQERFRTITATYYRGTHGVIVVYDVSNGESFANVKRW 103
>gi|51468996|emb|CAH17998.1| RAB1-like [Poa pratensis]
Length = 203
Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 75/146 (51%), Gaps = 1/146 (0%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
DS+ ++ + V K E +G+ ++L +WDTAGQE F IT +YYRGA +I +
Sbjct: 31 DSYLESYISTIGVDFKIRTVEQDGKTMKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDV 90
Query: 108 IDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
D+DSF W +++ + + +LV NK DL D+ VV+ E A + +G M T
Sbjct: 91 TDQDSFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMET 150
Query: 167 SVKEDINVNSIFRYLTTKCLSELRQQ 192
S K +NV F ++ + Q
Sbjct: 151 SAKNALNVEQAFMAMSASIKDRMASQ 176
>gi|345491599|ref|XP_001606644.2| PREDICTED: ras-related protein Rab-10-like [Nasonia vitripennis]
Length = 200
Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 82/163 (50%), Gaps = 2/163 (1%)
Query: 34 GAQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKA 93
G I F D D+F + + K E G++++L +WDTAGQE F IT +
Sbjct: 19 GVGKTCILFRFSD-DAFSTTFISTIGIDFKIKTVELRGKKIKLQIWDTAGQERFHTITTS 77
Query: 94 YYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEA 152
YYRGA ++ + + +FE +W ++ E + +++ NK D+ D+ V+ E
Sbjct: 78 YYRGAMGIMLVYDITNEKTFENIVNWLRNIDEHANENVEKMILGNKSDMEDRREVSTERG 137
Query: 153 DLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSELRQQEEE 195
+ ++R G R M TS K +IN++ FR L L + +E +
Sbjct: 138 EAIAREHGIRFMETSAKANINIDRAFRELAEAILDKTHGKEPQ 180
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 39/71 (54%), Gaps = 6/71 (8%)
Query: 8 GEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVSIKRTIK 67
G++++L +WDTAGQE F IT +YYRGA ++ + + +FE +W R I
Sbjct: 55 GKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKTFENIVNW------LRNID 108
Query: 68 ECEGEEVRLML 78
E E V M+
Sbjct: 109 EHANENVEKMI 119
>gi|145524505|ref|XP_001448080.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124415613|emb|CAK80683.1| unnamed protein product [Paramecium tetraurelia]
Length = 199
Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 78/161 (48%), Gaps = 1/161 (0%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
D FE H + V + G+E++L +WDT G E++ A+T YY+GA ++ F
Sbjct: 28 DKFEEGHKITIGVEFAQKNVNIMGKEIKLAIWDTCGAEQYRALTNIYYKGAAGALLIFDI 87
Query: 108 IDRDSFEAAHSWKMKVENECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTS 167
DR SFE W +E+ I +LV NK+DL DQ V+ +EA + + TS
Sbjct: 88 TDRSSFENLDKWLKDIESNTSSIVIMLVANKLDLSDQRQVSKQEAAQFAFEHKLAYLETS 147
Query: 168 VKEDINVNSIFRYLTTKCLSELRQQEEEYSINGNGLPPYTI 208
K+ + F L T+ +++L Q E N L TI
Sbjct: 148 AKDGTGIQQAFEQLATE-ITKLSQTTESIEKNNIKLTESTI 187
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 31/49 (63%)
Query: 8 GEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
G+E++L +WDT G E++ A+T YY+GA ++ F DR SFE W
Sbjct: 51 GKEIKLAIWDTCGAEQYRALTNIYYKGAAGALLIFDITDRSSFENLDKW 99
>gi|66514595|ref|XP_623213.1| PREDICTED: ras-related protein Rab-3 isoform 2 [Apis mellifera]
Length = 269
Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 71/135 (52%), Gaps = 1/135 (0%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
DSF +A + + K + V+L +WDTAGQE + IT AYYRGA ++ +
Sbjct: 90 DSFTSAFVSTVGIDFKVKTVFRHDKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDI 149
Query: 108 IDRDSFEAAHSWKMKVEN-ECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
+ +SF + W +++ C +LV NK D+ D+ V+ E L+ LG + T
Sbjct: 150 TNEESFNSVQDWVTQIKTYSCDNAQVILVGNKCDMEDERVITTERGKQLADQLGVQFFET 209
Query: 167 SVKEDINVNSIFRYL 181
S KE+IN+ ++F L
Sbjct: 210 SAKENINIKTVFEQL 224
>gi|388855844|emb|CCF50628.1| probable SEC4-like Rab/GTPase [Ustilago hordei]
Length = 208
Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 77/151 (50%), Gaps = 11/151 (7%)
Query: 64 RTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 123
RTI E +G+ ++L +WDTAGQE F IT AYYRGA ++ F D+ SFE +W +
Sbjct: 49 RTI-ELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVFDVTDQKSFENVRTWHANI 107
Query: 124 ENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIF---- 178
E E + +L+ NK D ++ V E+ + L++ LG + TS K + NV F
Sbjct: 108 EQHASEGVSKILIGNKSDWEEKRAVTTEQGEELAKELGIPYIETSAKSNSNVEEAFFNLA 167
Query: 179 -----RYLTTKCLSELRQQEEEYSINGNGLP 204
R + T +++ ++N N P
Sbjct: 168 REVKTRLIDTAAVTQASPAAASANVNVNSAP 198
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 34/54 (62%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 60
+G+ ++L +WDTAGQE F IT AYYRGA ++ F D+ SFE +W +
Sbjct: 54 DGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVFDVTDQKSFENVRTWHANI 107
>gi|326506496|dbj|BAJ86566.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 203
Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 49/146 (33%), Positives = 74/146 (50%), Gaps = 1/146 (0%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
DS+ ++ + V K E +G+ ++L +WDTAGQE F IT +YYRGA +I +
Sbjct: 31 DSYLESYISTIGVDFKIRTVEQDGKTMKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDV 90
Query: 108 IDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
D DSF W +++ E + +LV NK DL D+ VV+ E A + +G M T
Sbjct: 91 TDLDSFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMET 150
Query: 167 SVKEDINVNSIFRYLTTKCLSELRQQ 192
S K +NV F ++ + Q
Sbjct: 151 SAKNALNVEQAFMAMSASIKDRMASQ 176
>gi|308483958|ref|XP_003104180.1| CRE-RAB-35 protein [Caenorhabditis remanei]
gi|308258488|gb|EFP02441.1| CRE-RAB-35 protein [Caenorhabditis remanei]
Length = 209
Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 85/174 (48%), Gaps = 8/174 (4%)
Query: 19 AGQEEFDAITKAYY-----RGAQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEE 73
AG ++D + K G + ++ F+ ++F + + V K + G+
Sbjct: 2 AGTRDYDHLFKLLIIGDSGVGKSSLLLRFAD---NTFSENYITTIGVDFKIRTMDINGQR 58
Query: 74 VRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGEIPTV 133
V+L +WDTAGQE F IT YYRG V+ + + +SF W ++EN C + V
Sbjct: 59 VKLQIWDTAGQERFRTITSTYYRGTHGVVVVYDVTNGESFGNVKRWLQEIENNCDSVQKV 118
Query: 134 LVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLS 187
LV NK + D+ VV +A ++++ TS KED NV +F +T+ L+
Sbjct: 119 LVGNKCEESDRRVVLESDARNYAQSMNIAFFETSAKEDKNVEPMFTCITSLVLT 172
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 43/79 (54%), Gaps = 7/79 (8%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV-----S 61
G+ V+L +WDTAGQE F IT YYRG V+ + + +SF W ++ S
Sbjct: 55 NGQRVKLQIWDTAGQERFRTITSTYYRGTHGVVVVYDVTNGESFGNVKRWLQEIENNCDS 114
Query: 62 IKRTI--KECEGEEVRLML 78
+++ + +CE + R++L
Sbjct: 115 VQKVLVGNKCEESDRRVVL 133
>gi|449016131|dbj|BAM79533.1| small GTP-binding protein of Rab family [Cyanidioschyzon merolae
strain 10D]
Length = 209
Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 51/136 (37%), Positives = 78/136 (57%), Gaps = 4/136 (2%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
DSF + K+ ++++ +G+ V+L +WDTAGQE F IT +YYRGA +I F
Sbjct: 36 DSFMSTIGVDFKI---KSLQFEDGKVVKLQIWDTAGQERFRTITSSYYRGAHGIIIVFDV 92
Query: 108 IDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
D +SF+ SW ++EN E + +LV NK DL +Q VV ++A+ L++ LG + T
Sbjct: 93 TDEESFKNVTSWISEIENYASESVCKLLVGNKTDLTEQRVVTRQQAEELAQRLGIPYIET 152
Query: 167 SVKEDINVNSIFRYLT 182
S K +V F +T
Sbjct: 153 SAKTADHVEEAFVMMT 168
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 33/50 (66%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
+G+ V+L +WDTAGQE F IT +YYRGA +I F D +SF+ SW
Sbjct: 55 DGKVVKLQIWDTAGQERFRTITSSYYRGAHGIIIVFDVTDEESFKNVTSW 104
>gi|237843001|ref|XP_002370798.1| RAS small GTpase, putative [Toxoplasma gondii ME49]
gi|211968462|gb|EEB03658.1| RAS small GTpase, putative [Toxoplasma gondii ME49]
gi|221502504|gb|EEE28231.1| Rab family protein [Toxoplasma gondii VEG]
Length = 202
Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 80/155 (51%), Gaps = 1/155 (0%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
D++ ++ + V K + +G+ V+L +WDTAGQE F IT +YYRGA +I +
Sbjct: 31 DTYTESYISTIGVDFKIRTIDLDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDV 90
Query: 108 IDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
DR+SF +W M+++ E + +LV NK DL + V EE + + R + T
Sbjct: 91 TDRESFNNVKNWMMEIDKYAMEGVSKLLVGNKCDLTSKRTVTYEEGKEFADSCNMRFIET 150
Query: 167 SVKEDINVNSIFRYLTTKCLSELRQQEEEYSINGN 201
S K NV F + ++ + ++ +++ N N
Sbjct: 151 SAKNAHNVEQAFHIMASEIKARVQVNQQQSRPNAN 185
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 36/54 (66%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 60
+G+ V+L +WDTAGQE F IT +YYRGA +I + DR+SF +W M++
Sbjct: 53 DGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDRESFNNVKNWMMEI 106
>gi|340729787|ref|XP_003403177.1| PREDICTED: ras-related protein Rab-3-like [Bombus terrestris]
Length = 270
Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 71/135 (52%), Gaps = 1/135 (0%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
DSF +A + + K + V+L +WDTAGQE + IT AYYRGA ++ +
Sbjct: 91 DSFTSAFVSTVGIDFKVKTVFRHDKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDI 150
Query: 108 IDRDSFEAAHSWKMKVEN-ECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
+ +SF + W +++ C +LV NK D+ D+ V+ E L+ LG + T
Sbjct: 151 TNEESFNSVQDWVTQIKTYSCDNAQVILVGNKCDMEDERVITTERGKQLADQLGVQFFET 210
Query: 167 SVKEDINVNSIFRYL 181
S KE+IN+ ++F L
Sbjct: 211 SAKENINIKTVFEQL 225
>gi|302848074|ref|XP_002955570.1| RabE/Rab8 [Volvox carteri f. nagariensis]
gi|549809|sp|P36861.1|YPTV2_VOLCA RecName: Full=GTP-binding protein yptV2
gi|409162|gb|AAA34251.1| GTP-binding protein [Volvox carteri]
gi|300259193|gb|EFJ43423.1| RabE/Rab8 [Volvox carteri f. nagariensis]
Length = 217
Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 89/176 (50%), Gaps = 8/176 (4%)
Query: 20 GQEEFDAITKAYYRG----AQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVR 75
G+ ++DA+ K G ++C++ T D F ++ + + K + +G+ V+
Sbjct: 6 GRPDYDALIKLLLVGDSGVGKSCLLLRFT--DDMFTSSFITTIGIDFKIKKVDVDGKLVK 63
Query: 76 LMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGE-IPTVL 134
L +WDTAGQE F IT AYYRGAQ ++ + D SF +W +E + + +L
Sbjct: 64 LQIWDTAGQERFRTITSAYYRGAQGIILVYDITDEASFNNVRNWMRNIEQHASDNVNKIL 123
Query: 135 VQNKIDLL-DQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSEL 189
V NK+DL D+ VV+ L+ G R TS K++++V F + L+ +
Sbjct: 124 VGNKLDLAEDKRVVSIARGQALADEFGFRFYETSAKDNVHVEEAFIAVAKDVLARM 179
Score = 59.3 bits (142), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 32/51 (62%)
Query: 6 CEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
+G+ V+L +WDTAGQE F IT AYYRGAQ ++ + D SF +W
Sbjct: 57 VDGKLVKLQIWDTAGQERFRTITSAYYRGAQGIILVYDITDEASFNNVRNW 107
>gi|325092195|gb|EGC45505.1| GTP-binding protein [Ajellomyces capsulatus H88]
Length = 205
Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 80/171 (46%), Gaps = 9/171 (5%)
Query: 19 AGQEEFDAITKAYYRGAQA-----CVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEE 73
AG +D + K G C++ FS DSF + + + K E +G+
Sbjct: 2 AGTRNYDFLIKLLLIGDSGVGKSCCLLRFS---EDSFTPSFITTIGIDFKIRTIELDGKR 58
Query: 74 VRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGE-IPT 132
V+L +WDTAGQE F IT AYYRGA ++ + D SF +W VE E +
Sbjct: 59 VKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRTWFSNVEQHASEGVHK 118
Query: 133 VLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLTT 183
+L+ NK D ++ V E+ L+ LG + S K +INV F L +
Sbjct: 119 MLIGNKCDWEEKRAVTTEQGQKLADELGIPFLEVSAKNNINVEKAFYTLAS 169
>gi|198418247|ref|XP_002129883.1| PREDICTED: similar to Ras-related protein Rab-10 [Ciona
intestinalis]
Length = 202
Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 83/160 (51%), Gaps = 3/160 (1%)
Query: 35 AQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAY 94
+ CV+ F D D+F + + K E G++++L +WDTAGQE F IT +Y
Sbjct: 21 GKTCVL-FRFSD-DAFNTTFISTIGIDFKIKTVELNGKKIKLQIWDTAGQERFHTITTSY 78
Query: 95 YRGAQACVITFSTIDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEAD 153
YRGA ++ + + SFE W +E E + +L+ NK D+ D+ +++ E +
Sbjct: 79 YRGANGIMLVYDITNTKSFENISKWLRNIEEHASEDVEKMLLGNKCDMEDKRMISKERGE 138
Query: 154 LLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSELRQQE 193
++++ G + TS K +IN+ + F L T L + +E
Sbjct: 139 MIAKEHGIKFYETSAKNNINIETAFIALATDILHKTPVKE 178
>gi|432950660|ref|XP_004084550.1| PREDICTED: ras-related protein Rab-35-like [Oryzias latipes]
Length = 201
Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 71/142 (50%), Gaps = 5/142 (3%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
++F ++ + V K E GE+V+L +WDTAGQE F IT YYRG ++ +
Sbjct: 31 NTFSGSYITTIGVDFKIRTVEINGEKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDV 90
Query: 108 IDRDSFEAAHSWKMKVENECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTS 167
+SF W ++ C ++ +LV NK D VV +A + +G L TS
Sbjct: 91 TSAESFVNVKRWLHEINQNCDDVCRILVGNKNDDPGSKVVETTDAQKFAEQMGISLFETS 150
Query: 168 VKEDINVNSIFRYLTTKCLSEL 189
KE++NV +F C++EL
Sbjct: 151 AKENVNVEEMF-----NCITEL 167
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 28/49 (57%)
Query: 8 GEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
GE+V+L +WDTAGQE F IT YYRG ++ + +SF W
Sbjct: 54 GEKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRW 102
>gi|123495829|ref|XP_001326833.1| small GTP-binding protein [Trichomonas vaginalis G3]
gi|121909753|gb|EAY14610.1| small GTP-binding protein, putative [Trichomonas vaginalis G3]
Length = 195
Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 69/122 (56%), Gaps = 2/122 (1%)
Query: 60 VSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 119
V K + + +G +V+L +WDTAGQE+F AITKAYYRGA ++ F + +SF +W
Sbjct: 43 VDFKNKVIDIDGNKVKLQIWDTAGQEKFRAITKAYYRGAHGILVVFDISNVESFHRTSAW 102
Query: 120 KMKVENECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFR 179
++NE +I +L+ NK DL + V+ EEA+ L+ TS KED V F
Sbjct: 103 LDSIKNENCDIEVLLIGNKADL--ERAVSKEEAEGLAEKYDIPYFETSAKEDKGVTEAFE 160
Query: 180 YL 181
L
Sbjct: 161 KL 162
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 35/50 (70%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
+G +V+L +WDTAGQE+F AITKAYYRGA ++ F + +SF +W
Sbjct: 53 DGNKVKLQIWDTAGQEKFRAITKAYYRGAHGILVVFDISNVESFHRTSAW 102
>gi|124506171|ref|XP_001351683.1| Rab1b, GTPase [Plasmodium falciparum 3D7]
gi|13375179|emb|CAC34553.1| putative GTPase [Plasmodium falciparum 3D7]
gi|23504611|emb|CAD51490.1| Rab1b, GTPase [Plasmodium falciparum 3D7]
Length = 200
Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 82/153 (53%), Gaps = 5/153 (3%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
D++ ++ + V K E E + ++L +WDTAGQE F IT +YYRGAQ +I +
Sbjct: 31 DTYTDSYISTIGVDFKIKTIEIEDKIIKLQIWDTAGQERFRTITSSYYRGAQGIIIVYDV 90
Query: 108 IDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
DRDSF +W +++E E + +L+ NKIDL + V+ EE L+ + + + T
Sbjct: 91 TDRDSFNNVKNWIIEIEKYASEDVQKILIGNKIDLKNDRNVSYEEGKELADSCNIQFLET 150
Query: 167 SVKEDINVNSIFRYLTTKCLSELRQQEEEYSIN 199
S K NV F+ + E++ + + +IN
Sbjct: 151 SAKIAHNVEQAFKTMAY----EIKNKSQHETIN 179
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 36/54 (66%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 60
E + ++L +WDTAGQE F IT +YYRGAQ +I + DRDSF +W +++
Sbjct: 53 EDKIIKLQIWDTAGQERFRTITSSYYRGAQGIIIVYDVTDRDSFNNVKNWIIEI 106
>gi|350411512|ref|XP_003489373.1| PREDICTED: ras-related protein Rab-3-like [Bombus impatiens]
Length = 270
Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 71/135 (52%), Gaps = 1/135 (0%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
DSF +A + + K + V+L +WDTAGQE + IT AYYRGA ++ +
Sbjct: 91 DSFTSAFVSTVGIDFKVKTVFRHDKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDI 150
Query: 108 IDRDSFEAAHSWKMKVEN-ECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
+ +SF + W +++ C +LV NK D+ D+ V+ E L+ LG + T
Sbjct: 151 TNEESFNSVQDWVTQIKTYSCDNAQVILVGNKCDMEDERVITTERGKQLADQLGVQFFET 210
Query: 167 SVKEDINVNSIFRYL 181
S KE+IN+ ++F L
Sbjct: 211 SAKENINIKTVFEQL 225
>gi|303750|dbj|BAA02116.1| GTP-binding protein [Pisum sativum]
gi|738940|prf||2001457H GTP-binding protein
Length = 202
Score = 90.1 bits (222), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 77/159 (48%), Gaps = 6/159 (3%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
DS+ ++ + V K E +G+ ++L +WDTAGQE F IT +YYRGA ++ +
Sbjct: 31 DSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDV 90
Query: 108 IDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
D++SF W +++ E + +LV NK DL D VV+ E A + +G M T
Sbjct: 91 TDQESFNNVKQWLNEIDRYASENVNKLLVGNKSDLADNKVVSSETAKAFADEIGIPFMET 150
Query: 167 SVKEDINVNSIFRYLTTKCLSELRQQEEEYSINGNGLPP 205
S K NV F + + + + Q N PP
Sbjct: 151 SAKNANNVEQAFMAMAAEIKNRMASQPSN-----NARPP 184
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 32/50 (64%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
+G+ ++L +WDTAGQE F IT +YYRGA ++ + D++SF W
Sbjct: 53 DGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQW 102
>gi|66518279|ref|XP_393723.2| PREDICTED: ras-related protein Rab-10 isoform 2 [Apis mellifera]
gi|380028841|ref|XP_003698094.1| PREDICTED: ras-related protein Rab-10-like [Apis florea]
Length = 200
Score = 90.1 bits (222), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 81/163 (49%), Gaps = 2/163 (1%)
Query: 34 GAQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKA 93
G I F D D+F + + K E G++++L +WDTAGQE F IT +
Sbjct: 19 GVGKTCILFRFSD-DAFSTTFISTIGIDFKIKTVELRGKKIKLQIWDTAGQERFHTITTS 77
Query: 94 YYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEA 152
YYRGA ++ + + +FE W ++ E + +++ NK D+ D+ VV+ E
Sbjct: 78 YYRGAMGIMLVYDITNEKTFENIVKWLRNIDEHANEDVEKMILGNKSDMEDKRVVSTERG 137
Query: 153 DLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSELRQQEEE 195
+ ++R G R M TS K +IN++ F L L + +E +
Sbjct: 138 EAIAREHGIRFMETSAKANINIDRAFSELAEAILEKTHGKEPQ 180
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 39/71 (54%), Gaps = 6/71 (8%)
Query: 8 GEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVSIKRTIK 67
G++++L +WDTAGQE F IT +YYRGA ++ + + +FE W R I
Sbjct: 55 GKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKTFENIVKW------LRNID 108
Query: 68 ECEGEEVRLML 78
E E+V M+
Sbjct: 109 EHANEDVEKMI 119
>gi|328874798|gb|EGG23163.1| Rab GTPase [Dictyostelium fasciculatum]
Length = 205
Score = 90.1 bits (222), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 70/132 (53%), Gaps = 1/132 (0%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
DS+ H + V K +G+ ++L +WDTAGQE F IT +YYRGAQ ++ +
Sbjct: 31 DSWTDTHISTIGVDFKIKTLNLDGKTIKLQIWDTAGQERFRTITSSYYRGAQGIILVYDC 90
Query: 108 IDRDSFEAAHSWKMKVEN-ECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
D+DSF W +++ C + +LV NK DL+++ VV +A + ++G + T
Sbjct: 91 TDQDSFNNVKQWMGEIDRYACENVNKLLVGNKTDLVNEKVVDTNQAKSFAESMGIPFIET 150
Query: 167 SVKEDINVNSIF 178
S K NV F
Sbjct: 151 SAKNATNVEECF 162
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 33/50 (66%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
+G+ ++L +WDTAGQE F IT +YYRGAQ ++ + D+DSF W
Sbjct: 53 DGKTIKLQIWDTAGQERFRTITSSYYRGAQGIILVYDCTDQDSFNNVKQW 102
>gi|154272996|ref|XP_001537350.1| GTP-binding protein SAS1 [Ajellomyces capsulatus NAm1]
gi|150415862|gb|EDN11206.1| GTP-binding protein SAS1 [Ajellomyces capsulatus NAm1]
gi|225555103|gb|EEH03396.1| GTP-binding protein SAS1 [Ajellomyces capsulatus G186AR]
Length = 205
Score = 90.1 bits (222), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 80/171 (46%), Gaps = 9/171 (5%)
Query: 19 AGQEEFDAITKAYYRGAQA-----CVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEE 73
AG +D + K G C++ FS DSF + + + K E +G+
Sbjct: 2 AGTRNYDFLIKLLLIGDSGVGKSCCLLRFS---EDSFTPSFITTIGIDFKIRTIELDGKR 58
Query: 74 VRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGE-IPT 132
V+L +WDTAGQE F IT AYYRGA ++ + D SF +W VE E +
Sbjct: 59 VKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRTWFSNVEQHASEGVHK 118
Query: 133 VLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLTT 183
+L+ NK D ++ V E+ L+ LG + S K +INV F L +
Sbjct: 119 MLIGNKCDWEEKRAVTTEQGQKLADELGIPFLEVSAKNNINVEKAFYTLAS 169
>gi|147905945|ref|NP_001087181.1| RAB8B, member RAS oncogene family [Xenopus laevis]
gi|50604253|gb|AAH78133.1| Rab8b-prov protein [Xenopus laevis]
Length = 207
Score = 90.1 bits (222), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 82/158 (51%), Gaps = 1/158 (0%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
D+F + + K E +G++++L +WDTAGQE F IT AYYRGA ++ +
Sbjct: 31 DAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDI 90
Query: 108 IDRDSFEAAHSWKMKV-ENECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
+ SFE +W + E+ ++ +++ NK D+ D+ V+ E+ + L+ G + + T
Sbjct: 91 TNEKSFENIKNWIRNIEEHASSDVERMILGNKCDMNDKRQVSREKGEKLAIDYGIKFLET 150
Query: 167 SVKEDINVNSIFRYLTTKCLSELRQQEEEYSINGNGLP 204
S K INV F L +++L ++ E G G P
Sbjct: 151 SAKSSINVEEGFFTLARDIMTKLNRKMNENVSPGGGGP 188
>gi|1457956|gb|AAC50774.1| Rab30 [Homo sapiens]
Length = 203
Score = 90.1 bits (222), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 52/143 (36%), Positives = 76/143 (53%), Gaps = 1/143 (0%)
Query: 50 FEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTID 109
F + V E GE+V+L +WDTAGQE F +IT++YYR A A ++T+
Sbjct: 34 FPPGQGATIGVGFMIKTVEINGEKVKLQIWDTAGQERFRSITQSYYRSANALILTYDITC 93
Query: 110 RDSFEAAHSWKMKVEN-ECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSV 168
+SF W ++E ++ TVLV NKIDL ++ V+ + A+ S A + TS
Sbjct: 94 EESFRCLPEWLREIEQYASNKVITVLVGNKIDLAERREVSQQRAEEFSEAQDMYYLETSA 153
Query: 169 KEDINVNSIFRYLTTKCLSELRQ 191
KE NV +F L + +SE RQ
Sbjct: 154 KESDNVEKLFLDLACRLISEARQ 176
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 33/49 (67%)
Query: 8 GEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
GE+V+L +WDTAGQE F +IT++YYR A A ++T+ +SF W
Sbjct: 55 GEKVKLQIWDTAGQERFRSITQSYYRSANALILTYDITCEESFRCLPEW 103
>gi|47225841|emb|CAF98321.1| unnamed protein product [Tetraodon nigroviridis]
Length = 207
Score = 90.1 bits (222), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 79/158 (50%), Gaps = 1/158 (0%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
DSF + + K E +G+ V+L +WDTAGQE F IT AYYRGA ++ +
Sbjct: 31 DSFNTTFISTIGIDFKIRTIELDGKRVKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDI 90
Query: 108 IDRDSFEAAHSWKMKV-ENECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
+ SFE +W + E+ ++ +++ NK D+ D+ V+ + + L+ G + + T
Sbjct: 91 SNEKSFENIKNWIRNIEEHASSDVEKMILGNKCDMTDRRQVSKDRGEKLAIDYGVKFLET 150
Query: 167 SVKEDINVNSIFRYLTTKCLSELRQQEEEYSINGNGLP 204
S K +NV F + L L + + + G+G P
Sbjct: 151 SAKSSLNVEEAFYTMARDILHNLSSKTADPTAGGSGKP 188
>gi|8809602|dbj|BAA97153.1| ras-related small GTP-binding protein-like [Arabidopsis thaliana]
Length = 159
Score = 90.1 bits (222), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 50/143 (34%), Positives = 72/143 (50%), Gaps = 7/143 (4%)
Query: 64 RTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 123
RT+ E +G+ ++L +WDTAGQE F IT +YYRGA ++T+ D +SF W ++
Sbjct: 5 RTV-EQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVTYDVTDLESFNNVKQWLNEI 63
Query: 124 ENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLT 182
+ E + +LV NK DL Q VV+ E A + LG + TS K NV F +T
Sbjct: 64 DRYASENVNKLLVGNKNDLTSQKVVSTETAKAFADELGIPFLETSAKNATNVEEAFMAMT 123
Query: 183 TKCLSELRQQEEEYSINGNGLPP 205
+ + Q G PP
Sbjct: 124 AAIKTRMASQPA-----GGAKPP 141
Score = 59.7 bits (143), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 32/50 (64%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
+G+ ++L +WDTAGQE F IT +YYRGA ++T+ D +SF W
Sbjct: 10 DGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVTYDVTDLESFNNVKQW 59
>gi|111143508|gb|ABH06562.1| small Rab GTPase [Trichomonas vaginalis]
gi|111143526|gb|ABH06563.1| small Rab GTPase [Trichomonas vaginalis]
Length = 200
Score = 90.1 bits (222), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 54/144 (37%), Positives = 80/144 (55%), Gaps = 12/144 (8%)
Query: 64 RTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 123
RTI++ EG +V+L +WDTAGQE F AITK+YY G+ V+ + DR +FE W ++
Sbjct: 48 RTIEQ-EGAKVKLQIWDTAGQERFRAITKSYYHGSNGIVVVYDITDRKTFEKISDWFEQI 106
Query: 124 ------ENECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSI 177
E+ C +L+ NK DL + V+ EE + L+R M TS K+ INV+++
Sbjct: 107 NTSEPNEDSC----KILIGNKCDLNESRQVSLEEGEQLARDYNVPFMETSAKDSINVDNL 162
Query: 178 FRYLTTKCLSELRQQEEEYSINGN 201
F L + + E + S NGN
Sbjct: 163 FD-LMARAMREKSGKFTTGSSNGN 185
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 33/50 (66%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
EG +V+L +WDTAGQE F AITK+YY G+ V+ + DR +FE W
Sbjct: 53 EGAKVKLQIWDTAGQERFRAITKSYYHGSNGIVVVYDITDRKTFEKISDW 102
>gi|384497072|gb|EIE87563.1| GTP-binding protein ypt1 [Rhizopus delemar RA 99-880]
Length = 204
Score = 90.1 bits (222), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 70/132 (53%), Gaps = 1/132 (0%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
D++ ++ + V K E EG+ V+L +WDTAGQE F IT +YYRGA ++ +
Sbjct: 31 DTYTESYISTIGVDFKIRTIELEGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDV 90
Query: 108 IDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
D DSF W +++ E + +LV NK DL+D+ V ++A + L L+ T
Sbjct: 91 TDADSFNNVKQWLQEIDRYAAEGVNKLLVGNKSDLVDKKAVETDQAKEFADGLSIPLLET 150
Query: 167 SVKEDINVNSIF 178
S K+ NV F
Sbjct: 151 SAKDATNVEQAF 162
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 31/50 (62%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
EG+ V+L +WDTAGQE F IT +YYRGA ++ + D DSF W
Sbjct: 53 EGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDADSFNNVKQW 102
>gi|344237051|gb|EGV93154.1| Ras-related protein Rab-35 [Cricetulus griseus]
Length = 173
Score = 90.1 bits (222), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 46/126 (36%), Positives = 70/126 (55%), Gaps = 6/126 (4%)
Query: 64 RTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 123
RT+ E GE+V+L +WDTAGQE F IT YYRG ++ + +SF W ++
Sbjct: 20 RTV-EINGEKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEI 78
Query: 124 ENECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLTT 183
C ++ +LV NK D ++ VV E+A + +G +L TS KE++NV +F
Sbjct: 79 NQNCDDVCRILVGNKNDDPERKVVETEDAYKFAGQMGIQLFETSAKENVNVEEMF----- 133
Query: 184 KCLSEL 189
C++EL
Sbjct: 134 NCITEL 139
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 28/49 (57%)
Query: 8 GEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
GE+V+L +WDTAGQE F IT YYRG ++ + +SF W
Sbjct: 26 GEKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRW 74
>gi|225710138|gb|ACO10915.1| Ras-related protein Rab-3 [Caligus rogercresseyi]
Length = 217
Score = 90.1 bits (222), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 73/135 (54%), Gaps = 1/135 (0%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
DSF +A + + K + + V+L +WDTAGQE + IT AYYRGA ++ +
Sbjct: 44 DSFTSAFVSTVGIDFKVKTVFRQDKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDV 103
Query: 108 IDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
+ DSF H W +++ + +LV NK D+ D+ V++ E L+ +LG T
Sbjct: 104 TNEDSFNHVHDWCTQIKTYSWDNAQVILVGNKCDMEDERVISFERGKQLADSLGLEFFET 163
Query: 167 SVKEDINVNSIFRYL 181
S KE+INV ++F L
Sbjct: 164 SAKENINVRAVFERL 178
>gi|71895669|ref|NP_001026675.1| ras-related protein Rab-8A [Gallus gallus]
gi|82231235|sp|Q5F470.1|RAB8A_CHICK RecName: Full=Ras-related protein Rab-8A; Flags: Precursor
gi|60098467|emb|CAH65064.1| hypothetical protein RCJMB04_2k8 [Gallus gallus]
Length = 207
Score = 90.1 bits (222), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 85/156 (54%), Gaps = 3/156 (1%)
Query: 48 DSFEAAHSWKMKVSIK-RTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFS 106
D+F A + + K RTI E +G+ ++L +WDTAGQE F IT AYYRGA ++ +
Sbjct: 31 DAFNATFISTIGIDFKIRTI-ELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYD 89
Query: 107 TIDRDSFEAAHSWKMKVENECG-EIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMR 165
+ SFE +W +E ++ +++ NK D D+ V+ E+ + L+ + G + M
Sbjct: 90 ITNEKSFENIRNWVRNIEEHASPDVEKMILGNKCDANDKRQVSREQGEKLAASFGIKFME 149
Query: 166 TSVKEDINVNSIFRYLTTKCLSELRQQEEEYSINGN 201
TS K +IN+ + F L +++ ++ E S G+
Sbjct: 150 TSAKANINIENAFFTLARDIKAKMDKKLEGNSPQGS 185
>gi|83754993|pdb|2EW1|A Chain A, Crystal Structure Of Rab30 In Complex With A Gtp Analogue
Length = 201
Score = 90.1 bits (222), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 52/143 (36%), Positives = 76/143 (53%), Gaps = 1/143 (0%)
Query: 50 FEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTID 109
F + V E GE+V+L +WDTAGQE F +IT++YYR A A ++T+
Sbjct: 51 FPPGQGATIGVDFMIKTVEINGEKVKLQIWDTAGQERFRSITQSYYRSANALILTYDITC 110
Query: 110 RDSFEAAHSWKMKVEN-ECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSV 168
+SF W ++E ++ TVLV NKIDL ++ V+ + A+ S A + TS
Sbjct: 111 EESFRCLPEWLREIEQYASNKVITVLVGNKIDLAERREVSQQRAEEFSEAQDMYYLETSA 170
Query: 169 KEDINVNSIFRYLTTKCLSELRQ 191
KE NV +F L + +SE RQ
Sbjct: 171 KESDNVEKLFLDLACRLISEARQ 193
Score = 55.8 bits (133), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 33/49 (67%)
Query: 8 GEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
GE+V+L +WDTAGQE F +IT++YYR A A ++T+ +SF W
Sbjct: 72 GEKVKLQIWDTAGQERFRSITQSYYRSANALILTYDITCEESFRCLPEW 120
>gi|326929980|ref|XP_003211131.1| PREDICTED: ras-related protein Rab-35-like [Meleagris gallopavo]
Length = 201
Score = 90.1 bits (222), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 74/142 (52%), Gaps = 5/142 (3%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
++F ++ + V K E GE+V+L +WDTAGQE F IT YYRG ++ +
Sbjct: 31 NTFSGSYITTIGVDFKIRTVEINGEKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDV 90
Query: 108 IDRDSFEAAHSWKMKVENECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTS 167
+SF W ++ C ++ +LV NK D ++ VV E+A + + +L TS
Sbjct: 91 TSAESFVNVKRWLHEINQNCDDVCRILVGNKNDDPERKVVETEDAYKFAGQMEIQLFETS 150
Query: 168 VKEDINVNSIFRYLTTKCLSEL 189
KE+INV +F C++EL
Sbjct: 151 AKENINVEEMF-----NCITEL 167
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 28/49 (57%)
Query: 8 GEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
GE+V+L +WDTAGQE F IT YYRG ++ + +SF W
Sbjct: 54 GEKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRW 102
>gi|119179533|ref|XP_001241343.1| conserved hypothetical protein [Coccidioides immitis RS]
gi|303320893|ref|XP_003070441.1| Ras family protein [Coccidioides posadasii C735 delta SOWgp]
gi|240110137|gb|EER28296.1| Ras family protein [Coccidioides posadasii C735 delta SOWgp]
gi|320033061|gb|EFW15010.1| GTP-binding protein SAS1 [Coccidioides posadasii str. Silveira]
gi|392866739|gb|EAS30086.2| GTP-binding protein ypt2 [Coccidioides immitis RS]
Length = 205
Score = 90.1 bits (222), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 88/189 (46%), Gaps = 9/189 (4%)
Query: 19 AGQEEFDAITKAYYRGAQA-----CVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEE 73
AG +D + K G C++ FS DSF + + + K + G+
Sbjct: 2 AGTRNYDFLIKLLLIGDSGVGKSCCLLRFS---EDSFTPSFITTIGIDFKIRTIDLGGKR 58
Query: 74 VRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGE-IPT 132
V+L +WDTAGQE F IT AYYRGA ++ + D SF +W VE E +
Sbjct: 59 VKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRTWFSNVEQHASEGVHK 118
Query: 133 VLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSELRQQ 192
+L+ NK D ++ V+ E+ L+ LG + S K +INV+ F L ++ +
Sbjct: 119 MLIGNKCDWEEKRAVSTEQGQQLADELGIPFLEVSAKNNINVDKAFYTLASEIKKVMDTS 178
Query: 193 EEEYSINGN 201
+ E S + N
Sbjct: 179 KAEQSASHN 187
>gi|383848303|ref|XP_003699791.1| PREDICTED: ras-related protein Rab-10-like isoform 1 [Megachile
rotundata]
Length = 200
Score = 90.1 bits (222), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 81/163 (49%), Gaps = 2/163 (1%)
Query: 34 GAQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKA 93
G I F D D+F + + K E G++++L +WDTAGQE F IT +
Sbjct: 19 GVGKTCILFRFSD-DAFSTTFISTIGIDFKIKTVELRGKKIKLQIWDTAGQERFHTITTS 77
Query: 94 YYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEA 152
YYRGA ++ + + +FE W ++ E + +++ NK D+ D+ VV+ E
Sbjct: 78 YYRGAMGIMLVYDITNEKTFENIVKWLRNIDEHANEDVEKMILGNKSDMEDRRVVSTERG 137
Query: 153 DLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSELRQQEEE 195
+ ++R G R M TS K +IN++ F L L + +E +
Sbjct: 138 EAIAREHGIRFMETSAKANINIDRAFSELAEAILEKTHGKEPQ 180
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 39/71 (54%), Gaps = 6/71 (8%)
Query: 8 GEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVSIKRTIK 67
G++++L +WDTAGQE F IT +YYRGA ++ + + +FE W R I
Sbjct: 55 GKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKTFENIVKW------LRNID 108
Query: 68 ECEGEEVRLML 78
E E+V M+
Sbjct: 109 EHANEDVEKMI 119
>gi|344293727|ref|XP_003418572.1| PREDICTED: ras-related protein Rab-30-like [Loxodonta africana]
Length = 205
Score = 90.1 bits (222), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 52/144 (36%), Positives = 76/144 (52%), Gaps = 1/144 (0%)
Query: 50 FEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTID 109
F + V E GE+V+L +WDTAGQE F +IT++YYR A A ++T+
Sbjct: 36 FPPGQGATIGVDFMIKTVEINGEKVKLQIWDTAGQERFRSITQSYYRSANALILTYDITC 95
Query: 110 RDSFEAAHSWKMKVEN-ECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSV 168
+SF W ++E ++ TVLV NKIDL ++ V+ + A+ S A + TS
Sbjct: 96 EESFRCLPEWLREIEQYASNKVITVLVGNKIDLAERREVSQQRAEEFSEAQDMYYLETSA 155
Query: 169 KEDINVNSIFRYLTTKCLSELRQQ 192
KE NV +F L + +SE RQ
Sbjct: 156 KESDNVEKLFLDLACRLISEARQN 179
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 33/49 (67%)
Query: 8 GEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
GE+V+L +WDTAGQE F +IT++YYR A A ++T+ +SF W
Sbjct: 57 GEKVKLQIWDTAGQERFRSITQSYYRSANALILTYDITCEESFRCLPEW 105
>gi|281203215|gb|EFA77416.1| Rab GTPase [Polysphondylium pallidum PN500]
Length = 203
Score = 90.1 bits (222), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 70/132 (53%), Gaps = 1/132 (0%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
DS+ H + V K +G+ ++L +WDTAGQE F IT +YYRGAQ ++ +
Sbjct: 31 DSWTDTHISTIGVDFKIKTLNLDGKTIKLQIWDTAGQERFRTITSSYYRGAQGIILVYDC 90
Query: 108 IDRDSFEAAHSWKMKVEN-ECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
D+DSF W +++ C + +LV NK DL+++ VV +A + ++G + T
Sbjct: 91 TDQDSFNNVKQWMGEIDRYACENVNKLLVGNKTDLVNEKVVDTNQAKSFAESMGIPFIET 150
Query: 167 SVKEDINVNSIF 178
S K NV F
Sbjct: 151 SAKNATNVEECF 162
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 33/50 (66%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
+G+ ++L +WDTAGQE F IT +YYRGAQ ++ + D+DSF W
Sbjct: 53 DGKTIKLQIWDTAGQERFRTITSSYYRGAQGIILVYDCTDQDSFNNVKQW 102
>gi|224087698|ref|XP_002197665.1| PREDICTED: ras-related protein Rab-8A isoform 1 [Taeniopygia
guttata]
Length = 207
Score = 90.1 bits (222), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 85/156 (54%), Gaps = 3/156 (1%)
Query: 48 DSFEAAHSWKMKVSIK-RTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFS 106
D+F A + + K RTI E +G+ ++L +WDTAGQE F IT AYYRGA ++ +
Sbjct: 31 DAFNATFISTIGIDFKIRTI-ELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYD 89
Query: 107 TIDRDSFEAAHSWKMKVENECG-EIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMR 165
+ SFE +W +E ++ +++ NK D D+ V+ E+ + L+ + G + M
Sbjct: 90 ITNEKSFENIRNWVRNIEEHASPDVEKMILGNKCDANDKRQVSREQGEKLAASFGIKFME 149
Query: 166 TSVKEDINVNSIFRYLTTKCLSELRQQEEEYSINGN 201
TS K +IN+ + F L +++ ++ E S G+
Sbjct: 150 TSAKANINIENAFFTLARDIKAKMDKKLEGNSPQGS 185
>gi|332016796|gb|EGI57617.1| Ras-related protein Rab-3 [Acromyrmex echinatior]
Length = 260
Score = 90.1 bits (222), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 83/167 (49%), Gaps = 5/167 (2%)
Query: 19 AGQEEFDAITKAYYRGAQACVIT---FSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVR 75
A + FD + K G + T F D DSF +A + + K + V+
Sbjct: 49 AADQNFDYMFKLLIIGNSSVGKTSFLFRYAD-DSFTSAFVSTVGIDFKVKTVFRHDKRVK 107
Query: 76 LMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENEC-GEIPTVL 134
L +WDTAGQE + IT AYYRGA ++ + + +SF + W +++N +L
Sbjct: 108 LQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNSVQDWVTQIKNYSWDNAQVIL 167
Query: 135 VQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYL 181
V NK D+ ++ V++ E L+ LG R TS KE+INV ++F L
Sbjct: 168 VGNKCDMEEERVISTERGKQLAEQLGVRFFETSAKENINVKAVFEQL 214
>gi|240281309|gb|EER44812.1| GTP-binding protein [Ajellomyces capsulatus H143]
Length = 204
Score = 90.1 bits (222), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 51/151 (33%), Positives = 74/151 (49%), Gaps = 4/151 (2%)
Query: 34 GAQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKA 93
G C++ FS DSF + + + K E +G+ V+L +WDTAGQE F IT A
Sbjct: 21 GKSCCLLRFS---EDSFTPSFITTIGIDFKIRTIELDGKRVKLQIWDTAGQERFRTITTA 77
Query: 94 YYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEA 152
YYRGA ++ + D SF +W VE E + +L+ NK D ++ V E+
Sbjct: 78 YYRGAMGILLVYDVTDERSFNNIRTWFSNVEQHASEGVHKMLIGNKCDWEEKRAVTTEQG 137
Query: 153 DLLSRALGCRLMRTSVKEDINVNSIFRYLTT 183
L+ LG + S K +INV F L +
Sbjct: 138 QKLADELGIPFLEVSAKNNINVEKAFYTLAS 168
>gi|145484709|ref|XP_001428364.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74833834|emb|CAI39372.1| rab_A10 [Paramecium tetraurelia]
gi|124395449|emb|CAK60966.1| unnamed protein product [Paramecium tetraurelia]
Length = 206
Score = 90.1 bits (222), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 75/134 (55%), Gaps = 1/134 (0%)
Query: 68 ECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENEC 127
+ +G+ V++ +WDTAGQE F IT +YY+GA ++T+ D+ SF+ +W +VE
Sbjct: 53 DMQGKSVKMQIWDTAGQERFKTITASYYKGAHGIILTYDITDKQSFKDIENWLAEVEKHA 112
Query: 128 GE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCL 186
E + +LV NK DL + V EE L+ +LG + + S K + NV+ F L
Sbjct: 113 SENVVRLLVGNKADLESKRQVTYEEGKELADSLGIKFIEASAKANTNVDQAFMTLANNIK 172
Query: 187 SELRQQEEEYSING 200
+++ + E++ + G
Sbjct: 173 AKIGKSEDKPTPGG 186
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 47/85 (55%), Gaps = 5/85 (5%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVSIKRTI 66
+G+ V++ +WDTAGQE F IT +YY+GA ++T+ D+ SF+ +W +V
Sbjct: 55 QGKSVKMQIWDTAGQERFKTITASYYKGAHGIILTYDITDKQSFKDIENWLAEVE----- 109
Query: 67 KECEGEEVRLMLWDTAGQEEFDAIT 91
K VRL++ + A E +T
Sbjct: 110 KHASENVVRLLVGNKADLESKRQVT 134
>gi|344240431|gb|EGV96534.1| Ras-related protein Rab-30 [Cricetulus griseus]
Length = 201
Score = 90.1 bits (222), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 52/143 (36%), Positives = 76/143 (53%), Gaps = 1/143 (0%)
Query: 50 FEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTID 109
F + V E GE+V+L +WDTAGQE F +IT++YYR A A ++T+
Sbjct: 32 FPPGQGATIGVDFMIKTVEINGEKVKLQIWDTAGQERFRSITQSYYRSANALILTYDITC 91
Query: 110 RDSFEAAHSWKMKVEN-ECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSV 168
+SF W ++E ++ TVLV NKIDL ++ V+ + A+ S A + TS
Sbjct: 92 EESFRCLPEWLREIEQYASNKVITVLVGNKIDLAERREVSQQRAEEFSEAQDMYYLETSA 151
Query: 169 KEDINVNSIFRYLTTKCLSELRQ 191
KE NV +F L + +SE RQ
Sbjct: 152 KESDNVEKLFLDLACRLISEARQ 174
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 33/49 (67%)
Query: 8 GEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
GE+V+L +WDTAGQE F +IT++YYR A A ++T+ +SF W
Sbjct: 53 GEKVKLQIWDTAGQERFRSITQSYYRSANALILTYDITCEESFRCLPEW 101
>gi|206533|gb|AAA41993.1| RAB13, partial [Rattus norvegicus]
Length = 164
Score = 90.1 bits (222), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 68/124 (54%), Gaps = 2/124 (1%)
Query: 64 RTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 123
RT+ E EG+ ++L +WDTAGQE F IT +YYRGA ++ + D SFE +W +
Sbjct: 9 RTV-EIEGKRIKLQVWDTAGQERFKTITTSYYRGAMGIILVYDITDEKSFENIQNWMKSI 67
Query: 124 -ENECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLT 182
EN E+ +L+ NK D+ + V E+A+ L+R R TS K +NV+ F L
Sbjct: 68 KENASAEVERLLLGNKCDMEAKRKVQREQAERLAREHRIRFFETSAKSSVNVDEAFSSLA 127
Query: 183 TKCL 186
L
Sbjct: 128 RDIL 131
Score = 62.8 bits (151), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 44/73 (60%), Gaps = 7/73 (9%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVSIKRTI 66
EG+ ++L +WDTAGQE F IT +YYRGA ++ + D SFE +W MK +I
Sbjct: 14 EGKRIKLQVWDTAGQERFKTITTSYYRGAMGIILVYDITDEKSFENIQNW-MK-----SI 67
Query: 67 KECEGEEV-RLML 78
KE EV RL+L
Sbjct: 68 KENASAEVERLLL 80
>gi|71897245|ref|NP_001025840.1| ras-related protein Rab-35 [Gallus gallus]
gi|60098357|emb|CAH65009.1| hypothetical protein RCJMB04_1b12 [Gallus gallus]
Length = 201
Score = 90.1 bits (222), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 80/156 (51%), Gaps = 8/156 (5%)
Query: 34 GAQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKA 93
G + ++ F+ ++F ++ + V K E GE+V+L +WDTAGQE F IT
Sbjct: 20 GKSSLLLRFAD---NTFSGSYITTIGVDFKIRTVEINGEKVKLQIWDTAGQERFRTITST 76
Query: 94 YYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGEIPTVLVQNKIDLLDQSVVAPEEAD 153
YYRG ++ + +SF W ++ C ++ +LV NK D ++ VV E+A
Sbjct: 77 YYRGTHGVIVVYDVTSAESFVNVKRWLHEINQNCDDVCRILVGNKNDDPERKVVETEDAY 136
Query: 154 LLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSEL 189
+ + +L TS KE+INV +F C++EL
Sbjct: 137 KFAGQMEIQLFETSAKENINVEEMF-----NCITEL 167
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 28/49 (57%)
Query: 8 GEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
GE+V+L +WDTAGQE F IT YYRG ++ + +SF W
Sbjct: 54 GEKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRW 102
>gi|71019563|ref|XP_760012.1| hypothetical protein UM03865.1 [Ustilago maydis 521]
gi|46099538|gb|EAK84771.1| hypothetical protein UM03865.1 [Ustilago maydis 521]
Length = 209
Score = 90.1 bits (222), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 77/151 (50%), Gaps = 11/151 (7%)
Query: 64 RTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 123
RTI E +G+ ++L +WDTAGQE F IT AYYRGA ++ F D+ SFE +W +
Sbjct: 49 RTI-ELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVFDVTDQKSFENVRTWHANI 107
Query: 124 ENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIF---- 178
E E + +L+ NK D ++ V E+ + L++ LG + TS K + NV F
Sbjct: 108 EQHASEGVSKILIGNKSDWEEKRAVTTEQGEELAKELGIPYIETSAKSNSNVEEAFFNLA 167
Query: 179 -----RYLTTKCLSELRQQEEEYSINGNGLP 204
R + T +++ ++N N P
Sbjct: 168 REVKTRLIDTAAVTQASPAAAAGNVNVNSAP 198
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 34/54 (62%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 60
+G+ ++L +WDTAGQE F IT AYYRGA ++ F D+ SFE +W +
Sbjct: 54 DGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVFDVTDQKSFENVRTWHANI 107
>gi|449267738|gb|EMC78647.1| Ras-related protein Rab-35, partial [Columba livia]
Length = 184
Score = 90.1 bits (222), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 74/142 (52%), Gaps = 5/142 (3%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
++F ++ + V K E GE+V+L +WDTAGQE F IT YYRG ++ +
Sbjct: 14 NTFSGSYITTIGVDFKIRTVEINGEKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDV 73
Query: 108 IDRDSFEAAHSWKMKVENECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTS 167
+SF W ++ C ++ +LV NK D ++ VV E+A + + +L TS
Sbjct: 74 TSAESFVNVKRWLHEINQNCDDVCRILVGNKNDDPERKVVETEDAYKFAGQMEIQLFETS 133
Query: 168 VKEDINVNSIFRYLTTKCLSEL 189
KE+INV +F C++EL
Sbjct: 134 AKENINVEEMF-----NCITEL 150
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 28/49 (57%)
Query: 8 GEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
GE+V+L +WDTAGQE F IT YYRG ++ + +SF W
Sbjct: 37 GEKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRW 85
>gi|294883408|ref|XP_002770925.1| RAS small GTpases RIC1/ypt1, putative [Perkinsus marinus ATCC
50983]
gi|239874051|gb|EER02741.1| RAS small GTpases RIC1/ypt1, putative [Perkinsus marinus ATCC
50983]
Length = 211
Score = 89.7 bits (221), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 80/158 (50%), Gaps = 2/158 (1%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
D++ ++ + V K E +G+ ++L +WDTAGQE F IT +YYRGA +I +
Sbjct: 36 DTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDV 95
Query: 108 IDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
DR+SF W +++ E + +LV NK DL + VV +E L+ LG + T
Sbjct: 96 TDRESFNNVKHWVQEIDKYATENVSKLLVGNKSDLTSKKVVTYDEGKELADQLGISFLET 155
Query: 167 SVKEDINVNSIFRYLTTKCLSELRQQEEEYSINGNGLP 204
S K NV F ++ S ++ + S +G G P
Sbjct: 156 SAKNSHNVEQAFIEMSRGIKSRVKTTPQP-SRSGAGGP 192
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 32/50 (64%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
+G+ ++L +WDTAGQE F IT +YYRGA +I + DR+SF W
Sbjct: 58 DGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDRESFNNVKHW 107
>gi|195164155|ref|XP_002022914.1| GL16463 [Drosophila persimilis]
gi|194104976|gb|EDW27019.1| GL16463 [Drosophila persimilis]
Length = 223
Score = 89.7 bits (221), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 85/166 (51%), Gaps = 5/166 (3%)
Query: 35 AQACVITFSTIDR---DSFEAAHSWKMKVS-IKRTIKECEGEEVRLMLWDTAGQEEFDAI 90
+ CV S + R D F H ++ S + + + + +L +WDTAGQE F A+
Sbjct: 20 GEGCVGKTSLVLRYMEDKFNPQHLSTLQASFVTKKVTLPDERRAQLNIWDTAGQERFHAL 79
Query: 91 TKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENECG-EIPTVLVQNKIDLLDQSVVAP 149
YYRG+ ++ + D+DSF+ SW +++ G EI ++V NK DL +Q +
Sbjct: 80 GPIYYRGSDGALLVYDITDQDSFQKVKSWVRELKQMRGTEISLIIVGNKTDLEEQRAIGY 139
Query: 150 EEADLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSELRQQEEE 195
E+A ++ +G + + S KE+ V IF LT L L Q+E +
Sbjct: 140 EDARQYAQTVGAQYLEASAKENEGVAEIFELLTQLMLERLSQRERD 185
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 39/68 (57%), Gaps = 6/68 (8%)
Query: 11 VRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECE 70
+L +WDTAGQE F A+ YYRG+ ++ + D+DSF+ SW R +K+
Sbjct: 63 AQLNIWDTAGQERFHALGPIYYRGSDGALLVYDITDQDSFQKVKSW------VRELKQMR 116
Query: 71 GEEVRLML 78
G E+ L++
Sbjct: 117 GTEISLII 124
>gi|21361418|ref|NP_055303.2| ras-related protein Rab-30 [Homo sapiens]
gi|31560778|ref|NP_083770.2| ras-related protein Rab-30 [Mus musculus]
gi|115495465|ref|NP_001069697.1| ras-related protein Rab-30 [Bos taurus]
gi|386780907|ref|NP_001248052.1| ras-related protein Rab-30 [Macaca mulatta]
gi|57102328|ref|XP_533993.1| PREDICTED: ras-related protein Rab-30 [Canis lupus familiaris]
gi|114639563|ref|XP_001175176.1| PREDICTED: ras-related protein Rab-30 isoform 7 [Pan troglodytes]
gi|114639565|ref|XP_001175173.1| PREDICTED: ras-related protein Rab-30 isoform 5 [Pan troglodytes]
gi|114639567|ref|XP_001175175.1| PREDICTED: ras-related protein Rab-30 isoform 6 [Pan troglodytes]
gi|114639569|ref|XP_001175170.1| PREDICTED: ras-related protein Rab-30 isoform 3 [Pan troglodytes]
gi|114639571|ref|XP_001175166.1| PREDICTED: ras-related protein Rab-30 isoform 2 [Pan troglodytes]
gi|149719267|ref|XP_001492126.1| PREDICTED: ras-related protein Rab-30-like [Equus caballus]
gi|291384169|ref|XP_002708711.1| PREDICTED: RAB30, member RAS oncogene family [Oryctolagus
cuniculus]
gi|296216937|ref|XP_002754790.1| PREDICTED: ras-related protein Rab-30-like isoform 1 [Callithrix
jacchus]
gi|296216939|ref|XP_002754791.1| PREDICTED: ras-related protein Rab-30-like isoform 2 [Callithrix
jacchus]
gi|296216941|ref|XP_002754792.1| PREDICTED: ras-related protein Rab-30-like isoform 3 [Callithrix
jacchus]
gi|297689849|ref|XP_002822348.1| PREDICTED: ras-related protein Rab-30 isoform 2 [Pongo abelii]
gi|297689851|ref|XP_002822349.1| PREDICTED: ras-related protein Rab-30 isoform 3 [Pongo abelii]
gi|297689853|ref|XP_002822350.1| PREDICTED: ras-related protein Rab-30 isoform 4 [Pongo abelii]
gi|301780042|ref|XP_002925436.1| PREDICTED: ras-related protein Rab-30-like [Ailuropoda melanoleuca]
gi|332211163|ref|XP_003254688.1| PREDICTED: ras-related protein Rab-30 isoform 1 [Nomascus
leucogenys]
gi|332211165|ref|XP_003254689.1| PREDICTED: ras-related protein Rab-30 isoform 2 [Nomascus
leucogenys]
gi|332211167|ref|XP_003254690.1| PREDICTED: ras-related protein Rab-30 isoform 3 [Nomascus
leucogenys]
gi|332211169|ref|XP_003254691.1| PREDICTED: ras-related protein Rab-30 isoform 4 [Nomascus
leucogenys]
gi|348565559|ref|XP_003468570.1| PREDICTED: ras-related protein Rab-30-like [Cavia porcellus]
gi|354489829|ref|XP_003507063.1| PREDICTED: ras-related protein Rab-30-like [Cricetulus griseus]
gi|395743310|ref|XP_003777901.1| PREDICTED: ras-related protein Rab-30 [Pongo abelii]
gi|395814755|ref|XP_003780907.1| PREDICTED: ras-related protein Rab-30 isoform 1 [Otolemur
garnettii]
gi|395814757|ref|XP_003780908.1| PREDICTED: ras-related protein Rab-30 isoform 2 [Otolemur
garnettii]
gi|397502808|ref|XP_003822035.1| PREDICTED: ras-related protein Rab-30 isoform 1 [Pan paniscus]
gi|397502810|ref|XP_003822036.1| PREDICTED: ras-related protein Rab-30 isoform 2 [Pan paniscus]
gi|397502812|ref|XP_003822037.1| PREDICTED: ras-related protein Rab-30 isoform 3 [Pan paniscus]
gi|397502814|ref|XP_003822038.1| PREDICTED: ras-related protein Rab-30 isoform 4 [Pan paniscus]
gi|397502816|ref|XP_003822039.1| PREDICTED: ras-related protein Rab-30 isoform 5 [Pan paniscus]
gi|402894802|ref|XP_003910534.1| PREDICTED: ras-related protein Rab-30 [Papio anubis]
gi|403287762|ref|XP_003935099.1| PREDICTED: ras-related protein Rab-30 isoform 1 [Saimiri
boliviensis boliviensis]
gi|403287764|ref|XP_003935100.1| PREDICTED: ras-related protein Rab-30 isoform 2 [Saimiri
boliviensis boliviensis]
gi|403287766|ref|XP_003935101.1| PREDICTED: ras-related protein Rab-30 isoform 3 [Saimiri
boliviensis boliviensis]
gi|410972563|ref|XP_003992728.1| PREDICTED: ras-related protein Rab-30 [Felis catus]
gi|426251519|ref|XP_004019469.1| PREDICTED: ras-related protein Rab-30 isoform 1 [Ovis aries]
gi|426251521|ref|XP_004019470.1| PREDICTED: ras-related protein Rab-30 isoform 2 [Ovis aries]
gi|426369956|ref|XP_004051946.1| PREDICTED: ras-related protein Rab-30 isoform 1 [Gorilla gorilla
gorilla]
gi|426369958|ref|XP_004051947.1| PREDICTED: ras-related protein Rab-30 isoform 2 [Gorilla gorilla
gorilla]
gi|426369960|ref|XP_004051948.1| PREDICTED: ras-related protein Rab-30 isoform 3 [Gorilla gorilla
gorilla]
gi|426369962|ref|XP_004051949.1| PREDICTED: ras-related protein Rab-30 isoform 4 [Gorilla gorilla
gorilla]
gi|426369964|ref|XP_004051950.1| PREDICTED: ras-related protein Rab-30 isoform 5 [Gorilla gorilla
gorilla]
gi|441645341|ref|XP_004090651.1| PREDICTED: ras-related protein Rab-30 [Nomascus leucogenys]
gi|38258937|sp|Q15771.2|RAB30_HUMAN RecName: Full=Ras-related protein Rab-30; Flags: Precursor
gi|68652043|sp|Q923S9.1|RAB30_MOUSE RecName: Full=Ras-related protein Rab-30; Flags: Precursor
gi|116255980|sp|Q17QB7.1|RAB30_BOVIN RecName: Full=Ras-related protein Rab-30; Flags: Precursor
gi|15277920|gb|AAK94019.1|AF399756_1 RAB30 [Mus musculus]
gi|20379088|gb|AAM21104.1|AF498956_1 small GTP binding protein RAB30 [Homo sapiens]
gi|15559714|gb|AAH14213.1| RAB30, member RAS oncogene family [Homo sapiens]
gi|17028460|gb|AAH17550.1| RAB30, member RAS oncogene family [Mus musculus]
gi|49457208|emb|CAG46903.1| RAB30 [Homo sapiens]
gi|60814713|gb|AAX36314.1| RAB30 member RAS oncogene family [synthetic construct]
gi|74209184|dbj|BAE24976.1| unnamed protein product [Mus musculus]
gi|109659234|gb|AAI18449.1| RAB30, member RAS oncogene family [Bos taurus]
gi|112293021|dbj|BAF02888.1| Rab30 [Mus musculus]
gi|119595484|gb|EAW75078.1| RAB30, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|119595485|gb|EAW75079.1| RAB30, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|119595486|gb|EAW75080.1| RAB30, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|119595487|gb|EAW75081.1| RAB30, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|123984423|gb|ABM83557.1| RAB30, member RAS oncogene family [synthetic construct]
gi|123998391|gb|ABM86797.1| RAB30, member RAS oncogene family [synthetic construct]
gi|148674775|gb|EDL06722.1| RAB30, member RAS oncogene family, isoform CRA_a [Mus musculus]
gi|148674776|gb|EDL06723.1| RAB30, member RAS oncogene family, isoform CRA_a [Mus musculus]
gi|149068963|gb|EDM18515.1| RAB30, member RAS oncogene family, isoform CRA_a [Rattus
norvegicus]
gi|149068964|gb|EDM18516.1| RAB30, member RAS oncogene family, isoform CRA_a [Rattus
norvegicus]
gi|157928438|gb|ABW03515.1| RAB30, member RAS oncogene family [synthetic construct]
gi|158256188|dbj|BAF84065.1| unnamed protein product [Homo sapiens]
gi|189065406|dbj|BAG35245.1| unnamed protein product [Homo sapiens]
gi|261860434|dbj|BAI46739.1| RAB30, member RAS oncogene family [synthetic construct]
gi|281339635|gb|EFB15219.1| hypothetical protein PANDA_014945 [Ailuropoda melanoleuca]
gi|296471922|tpg|DAA14037.1| TPA: RAB30, member RAS oncogene family [Bos taurus]
gi|335773338|gb|AEH58359.1| Ras-related protein Rab-30-like protein [Equus caballus]
gi|351696042|gb|EHA98960.1| Ras-related protein Rab-30 [Heterocephalus glaber]
gi|355566910|gb|EHH23289.1| hypothetical protein EGK_06727 [Macaca mulatta]
gi|355752502|gb|EHH56622.1| hypothetical protein EGM_06073 [Macaca fascicularis]
gi|380811820|gb|AFE77785.1| ras-related protein Rab-30 [Macaca mulatta]
gi|384946490|gb|AFI36850.1| ras-related protein Rab-30 [Macaca mulatta]
gi|410206854|gb|JAA00646.1| RAB30, member RAS oncogene family [Pan troglodytes]
gi|410254834|gb|JAA15384.1| RAB30, member RAS oncogene family [Pan troglodytes]
gi|410290492|gb|JAA23846.1| RAB30, member RAS oncogene family [Pan troglodytes]
gi|410329963|gb|JAA33928.1| RAB30, member RAS oncogene family [Pan troglodytes]
gi|417397027|gb|JAA45547.1| Putative rab subfamily protein of small gtpase [Desmodus rotundus]
gi|431838480|gb|ELK00412.1| Ras-related protein Rab-30 [Pteropus alecto]
gi|440906949|gb|ELR57158.1| Ras-related protein Rab-30 [Bos grunniens mutus]
Length = 203
Score = 89.7 bits (221), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 52/143 (36%), Positives = 76/143 (53%), Gaps = 1/143 (0%)
Query: 50 FEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTID 109
F + V E GE+V+L +WDTAGQE F +IT++YYR A A ++T+
Sbjct: 34 FPPGQGATIGVDFMIKTVEINGEKVKLQIWDTAGQERFRSITQSYYRSANALILTYDITC 93
Query: 110 RDSFEAAHSWKMKVEN-ECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSV 168
+SF W ++E ++ TVLV NKIDL ++ V+ + A+ S A + TS
Sbjct: 94 EESFRCLPEWLREIEQYASNKVITVLVGNKIDLAERREVSQQRAEEFSEAQDMYYLETSA 153
Query: 169 KEDINVNSIFRYLTTKCLSELRQ 191
KE NV +F L + +SE RQ
Sbjct: 154 KESDNVEKLFLDLACRLISEARQ 176
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 33/49 (67%)
Query: 8 GEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
GE+V+L +WDTAGQE F +IT++YYR A A ++T+ +SF W
Sbjct: 55 GEKVKLQIWDTAGQERFRSITQSYYRSANALILTYDITCEESFRCLPEW 103
>gi|410905643|ref|XP_003966301.1| PREDICTED: ras-related protein Rab-13-like [Takifugu rubripes]
Length = 200
Score = 89.7 bits (221), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 81/161 (50%), Gaps = 4/161 (2%)
Query: 34 GAQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKA 93
G +I F+ D+F + + + + K + +G++V+L +WDTAGQE F IT A
Sbjct: 20 GKTCLIIRFA---EDNFNSTYISTIGIDFKVKTIDVDGKKVKLQVWDTAGQERFKTITTA 76
Query: 94 YYRGAQACVITFSTIDRDSFEAAHSWKMKV-ENECGEIPTVLVQNKIDLLDQSVVAPEEA 152
YYRGA ++ + D SFE +W + EN + +L+ NK D+ + V+ E
Sbjct: 77 YYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVSRMLLGNKCDIEAKRKVSKETG 136
Query: 153 DLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSELRQQE 193
+ L++ G R TS K INV F L L + +++
Sbjct: 137 EKLAKDHGIRFFETSAKSSINVEESFLSLAHDILQKSSKKQ 177
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 41/73 (56%), Gaps = 6/73 (8%)
Query: 6 CEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVSIKRT 65
+G++V+L +WDTAGQE F IT AYYRGA ++ + D SFE +W ++
Sbjct: 52 VDGKKVKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNW------MKS 105
Query: 66 IKECEGEEVRLML 78
IKE V ML
Sbjct: 106 IKENASAGVSRML 118
>gi|348500156|ref|XP_003437639.1| PREDICTED: ras-related protein Rab-8B-like [Oreochromis niloticus]
Length = 206
Score = 89.7 bits (221), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 82/158 (51%), Gaps = 1/158 (0%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
D+F + + K E +G++++L +WDTAGQE F IT AYYRGA ++ +
Sbjct: 31 DAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDI 90
Query: 108 IDRDSFEAAHSWKMKV-ENECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
+ SF+ +W + E+ ++ +++ NK D+ D+ V+ E + L+ G + + T
Sbjct: 91 TNEKSFDNIKNWIRNIEEHASADVEKMVLGNKCDMNDKRQVSKERGEKLAIDYGIKFLET 150
Query: 167 SVKEDINVNSIFRYLTTKCLSELRQQEEEYSINGNGLP 204
S K INV F L ++ L ++ + + +G G P
Sbjct: 151 SAKSSINVEEGFYTLARDIMARLNRKMNDNNPSGGGGP 188
>gi|198471676|ref|XP_002133801.1| GA22589 [Drosophila pseudoobscura pseudoobscura]
gi|198146025|gb|EDY72428.1| GA22589 [Drosophila pseudoobscura pseudoobscura]
Length = 224
Score = 89.7 bits (221), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 85/166 (51%), Gaps = 5/166 (3%)
Query: 35 AQACVITFSTIDR---DSFEAAHSWKMKVS-IKRTIKECEGEEVRLMLWDTAGQEEFDAI 90
+ CV S + R D F H ++ S + + + + +L +WDTAGQE F A+
Sbjct: 20 GEGCVGKTSLVLRYMEDKFNPQHLSTLQASFVTKKVTLPDERRAQLNIWDTAGQERFHAL 79
Query: 91 TKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENECG-EIPTVLVQNKIDLLDQSVVAP 149
YYRG+ ++ + D+DSF+ SW +++ G EI ++V NK DL +Q +
Sbjct: 80 GPIYYRGSDGALLVYDITDQDSFQKVKSWVRELKQMRGTEISLIIVGNKTDLEEQRAIGY 139
Query: 150 EEADLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSELRQQEEE 195
E+A ++ +G + + S KE+ V IF LT L L Q+E +
Sbjct: 140 EDARQYAQTVGAQYLEASAKENEGVAEIFELLTQLMLERLSQRERD 185
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 39/68 (57%), Gaps = 6/68 (8%)
Query: 11 VRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECE 70
+L +WDTAGQE F A+ YYRG+ ++ + D+DSF+ SW R +K+
Sbjct: 63 AQLNIWDTAGQERFHALGPIYYRGSDGALLVYDITDQDSFQKVKSW------VRELKQMR 116
Query: 71 GEEVRLML 78
G E+ L++
Sbjct: 117 GTEISLII 124
>gi|145477777|ref|XP_001424911.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74833757|emb|CAI39348.1| rab_B10 [Paramecium tetraurelia]
gi|124391978|emb|CAK57513.1| unnamed protein product [Paramecium tetraurelia]
Length = 206
Score = 89.7 bits (221), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 75/134 (55%), Gaps = 1/134 (0%)
Query: 68 ECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENEC 127
+ +G+ V++ +WDTAGQE F IT +YY+GA ++T+ D+ SF+ +W +VE
Sbjct: 53 DMQGKSVKMQIWDTAGQERFKTITASYYKGAHGIILTYDITDKQSFKDIENWLAEVEKHA 112
Query: 128 GE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCL 186
E + +LV NK DL + V EE L+ +LG + + S K + NV+ F L
Sbjct: 113 SENVVRLLVGNKADLESKRQVTYEEGKELADSLGIKFIEASAKANTNVDQAFMTLANNIK 172
Query: 187 SELRQQEEEYSING 200
+++ + E++ + G
Sbjct: 173 AKIGKSEDKPTPGG 186
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 47/85 (55%), Gaps = 5/85 (5%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVSIKRTI 66
+G+ V++ +WDTAGQE F IT +YY+GA ++T+ D+ SF+ +W +V
Sbjct: 55 QGKSVKMQIWDTAGQERFKTITASYYKGAHGIILTYDITDKQSFKDIENWLAEVE----- 109
Query: 67 KECEGEEVRLMLWDTAGQEEFDAIT 91
K VRL++ + A E +T
Sbjct: 110 KHASENVVRLLVGNKADLESKRQVT 134
>gi|401623107|gb|EJS41224.1| sec4p [Saccharomyces arboricola H-6]
Length = 215
Score = 89.7 bits (221), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 97/207 (46%), Gaps = 18/207 (8%)
Query: 11 VRLMLWDTAGQEEFDAITKAYYRG----AQACVITFSTIDRDSFEAAHSWKMKVSIKRTI 66
+R + + + +D+I K G ++C++ D F + + + K
Sbjct: 4 LRTVSASSGNGKSYDSIMKILLIGDSGVGKSCLLV--RFVEDKFNPSFITTIGIDFKIKT 61
Query: 67 KECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW-KMKVEN 125
+ G++V+L LWDTAGQE F IT AYYRGA ++ + D +F W K E+
Sbjct: 62 VDINGKKVKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEH 121
Query: 126 ECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYL---- 181
E +LV NK D +D VV ++ + L++ LG + +S K D NVN IF L
Sbjct: 122 ANDEAQLLLVGNKSD-MDTRVVTADQGEALAKELGIPFIESSAKNDNNVNEIFFTLAKLI 180
Query: 182 -----TTKCLSELRQQEEEYSIN-GNG 202
+ K + +E SIN GNG
Sbjct: 181 QEKIDSNKLVGVGNGKEGNISINSGNG 207
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 40/72 (55%), Gaps = 6/72 (8%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVSIKRTI 66
G++V+L LWDTAGQE F IT AYYRGA ++ + D +F W +T+
Sbjct: 65 NGKKVKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQW------FKTV 118
Query: 67 KECEGEEVRLML 78
E +E +L+L
Sbjct: 119 NEHANDEAQLLL 130
>gi|334327772|ref|XP_001377113.2| PREDICTED: ras-related protein Rab-30-like [Monodelphis domestica]
gi|395521092|ref|XP_003764654.1| PREDICTED: ras-related protein Rab-30 [Sarcophilus harrisii]
Length = 203
Score = 89.7 bits (221), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 52/143 (36%), Positives = 76/143 (53%), Gaps = 1/143 (0%)
Query: 50 FEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTID 109
F + V E GE+V+L +WDTAGQE F +IT++YYR A A ++T+
Sbjct: 34 FPPGQGATIGVDFMIKTVEINGEKVKLQIWDTAGQERFRSITQSYYRSANALILTYDITC 93
Query: 110 RDSFEAAHSWKMKVEN-ECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSV 168
+SF W ++E ++ TVLV NKIDL ++ V+ + A+ S A + TS
Sbjct: 94 EESFRCLPEWLREIEQYASNKVITVLVGNKIDLAERREVSQQRAEEFSEAQDMYYLETSA 153
Query: 169 KEDINVNSIFRYLTTKCLSELRQ 191
KE NV +F L + +SE RQ
Sbjct: 154 KESDNVEKLFLDLACRLISEARQ 176
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 33/49 (67%)
Query: 8 GEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
GE+V+L +WDTAGQE F +IT++YYR A A ++T+ +SF W
Sbjct: 55 GEKVKLQIWDTAGQERFRSITQSYYRSANALILTYDITCEESFRCLPEW 103
>gi|195448332|ref|XP_002071611.1| GK25049 [Drosophila willistoni]
gi|194167696|gb|EDW82597.1| GK25049 [Drosophila willistoni]
Length = 204
Score = 89.7 bits (221), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 80/161 (49%), Gaps = 2/161 (1%)
Query: 34 GAQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKA 93
G I F D D+F + + + K E G++++L +WDTAGQE F IT +
Sbjct: 19 GVGKTCILFRFSD-DAFTSTFISTIGIDFKIKTVELRGKKIKLQIWDTAGQERFHTITTS 77
Query: 94 YYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEA 152
YYRGA ++ + + SFE W ++ E + +++ NK D+ D+ VV+ E
Sbjct: 78 YYRGAMGIMLVYDITNEKSFENIVKWLRNIDEHANEDVEKMILGNKCDMTDKRVVSKERG 137
Query: 153 DLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSELRQQE 193
+ ++R G R M TS K +IN+ F L L + +E
Sbjct: 138 EAIAREHGIRFMETSAKSNINIERAFCELAEAILDKTSGRE 178
>gi|322800183|gb|EFZ21268.1| hypothetical protein SINV_07541 [Solenopsis invicta]
Length = 220
Score = 89.7 bits (221), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 72/135 (53%), Gaps = 1/135 (0%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
DSF +A + + K + V+L +WDTAGQE + IT AYYRGA ++ +
Sbjct: 40 DSFTSAFVSTVGIDFKVKTVFRHDKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDI 99
Query: 108 IDRDSFEAAHSWKMKVENEC-GEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
+ +SF + W +++N +LV NK D+ ++ V++ E L+ LG R T
Sbjct: 100 TNEESFNSVQDWITQIKNYSWDNAQVILVGNKCDMEEERVISTERGKQLAEQLGVRFFET 159
Query: 167 SVKEDINVNSIFRYL 181
S KE+INV ++F L
Sbjct: 160 SAKENINVKAVFETL 174
>gi|383854352|ref|XP_003702685.1| PREDICTED: 28S ribosomal protein S5, mitochondrial-like [Megachile
rotundata]
Length = 630
Score = 89.7 bits (221), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 61/190 (32%), Positives = 93/190 (48%), Gaps = 13/190 (6%)
Query: 19 AGQEEFDAITKAYYRG----AQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEV 74
A +E FD + K G + CV+ +F H + V + +++
Sbjct: 423 AAKENFDYLFKIVLIGDCGTGKTCVV--QRFRSGTFIERHGNTIGVDFSMKTVLIDDKKI 480
Query: 75 RLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVEN-ECGEIPTV 133
+L +WDTAGQE F IT++YYR A ++ + R +F + W +V + V
Sbjct: 481 KLQIWDTAGQERFRTITQSYYRSANGVIVVYDITKRSTFLSLQHWVEEVRRYTSSHVLLV 540
Query: 134 LVQNKIDLLDQSVVAPEEADLLSRALG--CRLMRTSVKEDINVNSIFRYLTTKCLSELRQ 191
LV NK DL D V EEA+ L + L +++ TS KE+ N++SIF YL SEL++
Sbjct: 541 LVGNKCDLEDLREVEKEEAEALCQYLPEVLQVVETSAKENTNIDSIFFYLA----SELKR 596
Query: 192 QEEEYSINGN 201
+ E IN N
Sbjct: 597 RHENRQINAN 606
>gi|213401875|ref|XP_002171710.1| GTP-binding protein SAS1 [Schizosaccharomyces japonicus yFS275]
gi|211999757|gb|EEB05417.1| GTP-binding protein SAS1 [Schizosaccharomyces japonicus yFS275]
Length = 200
Score = 89.7 bits (221), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 83/171 (48%), Gaps = 4/171 (2%)
Query: 34 GAQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKA 93
G ++ FS DSF + + + K E +G+ ++L +WDTAGQE F IT A
Sbjct: 21 GKSCLLLRFS---EDSFTPSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTA 77
Query: 94 YYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEA 152
YYRGA ++ + D SFE +W VE E + +L+ NK D +Q V E+
Sbjct: 78 YYRGAMGILLLYDVTDEKSFENIRTWFSNVEQHASENVFKILIGNKCDCEEQRQVTYEQG 137
Query: 153 DLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSELRQQEEEYSINGNGL 203
L+ LG + + S K ++NV+ F L + + E+E S + +
Sbjct: 138 QALAEELGIKFLEASAKTNVNVDEAFFTLAREIKKQKIDAEQESSAQASNI 188
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 32/50 (64%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
+G+ ++L +WDTAGQE F IT AYYRGA ++ + D SFE +W
Sbjct: 54 DGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLLYDVTDEKSFENIRTW 103
>gi|89258419|gb|ABD65433.1| Rab8 [Suberites domuncula]
Length = 175
Score = 89.7 bits (221), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 77/149 (51%), Gaps = 4/149 (2%)
Query: 34 GAQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKA 93
G ++ FS D+F + + + K E EG++++L +WDTAGQE F IT A
Sbjct: 20 GKTCILVRFS---EDAFNSTFISTIGIDFKIRTVEIEGKKIKLQIWDTAGQERFRTITTA 76
Query: 94 YYRGAQACVITFSTIDRDSFEAAHSWKMKV-ENECGEIPTVLVQNKIDLLDQSVVAPEEA 152
YYRGA ++ + + SFE +W + EN ++ +++ NK DL + VV+ E
Sbjct: 77 YYRGAMGIMLVYDVTNEKSFENIRNWIRNIEENASADVEKMILGNKCDLHESRVVSMERG 136
Query: 153 DLLSRALGCRLMRTSVKEDINVNSIFRYL 181
LL+ G + M TS K +V + F L
Sbjct: 137 RLLAEEHGVKFMETSAKSGTHVETAFLSL 165
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 33/50 (66%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
EG++++L +WDTAGQE F IT AYYRGA ++ + + SFE +W
Sbjct: 53 EGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDVTNEKSFENIRNW 102
>gi|413942419|gb|AFW75068.1| hypothetical protein ZEAMMB73_080599 [Zea mays]
gi|413942420|gb|AFW75069.1| hypothetical protein ZEAMMB73_080599 [Zea mays]
Length = 205
Score = 89.7 bits (221), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 49/146 (33%), Positives = 77/146 (52%), Gaps = 1/146 (0%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
DS+ + + V K + +G+ V+L +WDTAGQE F IT +YYRGA +I +
Sbjct: 33 DSYVDTYISTIGVDFKIRTIDLDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDV 92
Query: 108 IDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
D +SF W +++ + + +LV NK DL+D VV E+A + +LG + T
Sbjct: 93 TDMESFNNIKQWLSEIDRYASDNVCKLLVGNKCDLVDSKVVDTEKAKDFADSLGIPFIET 152
Query: 167 SVKEDINVNSIFRYLTTKCLSELRQQ 192
S KE INV F ++++ + Q
Sbjct: 153 SAKESINVEEAFLTMSSEIKKRMATQ 178
>gi|145348815|ref|XP_001418839.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|308805733|ref|XP_003080178.1| YptC1 (ISS) [Ostreococcus tauri]
gi|116058638|emb|CAL54345.1| YptC1 (ISS) [Ostreococcus tauri]
gi|144579069|gb|ABO97132.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 203
Score = 89.7 bits (221), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 77/160 (48%), Gaps = 2/160 (1%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
D++ + + V K E EG+ ++L +WDTAGQE F IT +YYRGA ++ +
Sbjct: 31 DTYTGTYISTIGVDFKIRTVELEGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDV 90
Query: 108 IDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
D +SFEA W +++ E + +LV NK DL Q VV A + +G + T
Sbjct: 91 TDMESFEAVKGWLNEIDRYANENVNKLLVGNKSDLTSQKVVDYATAKAFADEIGIPFIET 150
Query: 167 SVKEDINVNSIFRYLTTKCLSELRQQEE-EYSINGNGLPP 205
S K NV F + + + + Q + GN + P
Sbjct: 151 SAKNATNVEQAFMTMANEIKNRMASQPQMNAGPRGNTVRP 190
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 33/50 (66%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
EG+ ++L +WDTAGQE F IT +YYRGA ++ + D +SFEA W
Sbjct: 53 EGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDMESFEAVKGW 102
>gi|145504759|ref|XP_001438346.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834286|emb|CAI44505.1| rab_A69 [Paramecium tetraurelia]
gi|124405518|emb|CAK70949.1| unnamed protein product [Paramecium tetraurelia]
Length = 226
Score = 89.7 bits (221), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 81/156 (51%), Gaps = 3/156 (1%)
Query: 35 AQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAY 94
++C++ T R F H + V + ++++L +WDTAGQE F +IT++Y
Sbjct: 19 GKSCLLLQFTDSR--FRNEHDATIGVEFGSRNLKINDKQIKLQIWDTAGQESFKSITRSY 76
Query: 95 YRGAQACVITFSTIDRDSFEAAHSWKMKVEN-ECGEIPTVLVQNKIDLLDQSVVAPEEAD 153
YRG+ ++ F R SFE W +++ C +I V+V NKIDL D+ V EEA
Sbjct: 77 YRGSIGGILVFDVTSRQSFEDLQKWYQEIQGYACDKIEMVIVGNKIDLEDRREVQTEEAR 136
Query: 154 LLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSEL 189
++ G TS K NV+++F + + L ++
Sbjct: 137 KYAQKQGFAYFETSAKTGENVDNVFETMANQVLKKI 172
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 34/52 (65%)
Query: 9 EEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 60
++++L +WDTAGQE F +IT++YYRG+ ++ F R SFE W ++
Sbjct: 54 KQIKLQIWDTAGQESFKSITRSYYRGSIGGILVFDVTSRQSFEDLQKWYQEI 105
>gi|307176945|gb|EFN66251.1| Ras-related protein Rab-3 [Camponotus floridanus]
Length = 258
Score = 89.7 bits (221), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 72/135 (53%), Gaps = 1/135 (0%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
DSF +A + + K + V+L +WDTAGQE + IT AYYRGA ++ +
Sbjct: 79 DSFTSAFVSTVGIDFKVKTVFRHDKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDI 138
Query: 108 IDRDSFEAAHSWKMKVENEC-GEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
+ +SF + W +++N +LV NK D+ ++ V++ E L+ LG R T
Sbjct: 139 TNEESFNSVQDWITQIKNYSWDNAQVILVGNKCDMEEERVISSERGKQLAEQLGVRFFET 198
Query: 167 SVKEDINVNSIFRYL 181
S KE+INV ++F L
Sbjct: 199 SAKENINVKAVFETL 213
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 30/48 (62%)
Query: 9 EEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
+ V+L +WDTAGQE + IT AYYRGA ++ + + +SF + W
Sbjct: 103 KRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNSVQDW 150
>gi|289741231|gb|ADD19363.1| Rab protein 10 [Glossina morsitans morsitans]
Length = 204
Score = 89.7 bits (221), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 75/146 (51%), Gaps = 2/146 (1%)
Query: 34 GAQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKA 93
G I F D D+F + + + K E G++++L +WDTAGQE F IT +
Sbjct: 19 GVGKTCILFRFSD-DAFTSTFISTIGIDFKIKTVELRGKKIKLQIWDTAGQERFHTITTS 77
Query: 94 YYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEA 152
YYRGA ++ + + SFE W ++ E + +++ NK D+ D+ VV+ E
Sbjct: 78 YYRGAMGIMLVYDITNEKSFENIVKWLRNIDEHANEDVEKMILGNKCDMADKRVVSKERG 137
Query: 153 DLLSRALGCRLMRTSVKEDINVNSIF 178
+ ++R G R M TS K +IN+ F
Sbjct: 138 EAIAREHGIRFMETSAKSNINIERAF 163
>gi|354475103|ref|XP_003499769.1| PREDICTED: ras-related protein Rab-3D-like [Cricetulus griseus]
gi|344240071|gb|EGV96174.1| Ras-related protein Rab-3D [Cricetulus griseus]
Length = 219
Score = 89.7 bits (221), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 77/160 (48%), Gaps = 2/160 (1%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
DSF A + + K + ++L +WDTAGQE + IT AYYRGA ++ +
Sbjct: 45 DSFTPAFVSTVGIDFKVKTVYRHDKRIKLQIWDTAGQERYRTITTAYYRGAMGFLLMYDI 104
Query: 108 IDRDSFEAAHSWKMKVENEC-GEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
+++SF A W +++ +LV NK DL D+ +V E+ L+ LG
Sbjct: 105 ANQESFTAVQDWATQIKTYSWDNAQVILVGNKCDLEDERLVPAEDGQRLADDLGFEFFEA 164
Query: 167 SVKEDINVNSIF-RYLTTKCLSELRQQEEEYSINGNGLPP 205
S KE+INV +F R + T C E S+ NG P
Sbjct: 165 SAKENINVKQVFERLVDTICEKMTESLEPSSSVGSNGKGP 204
>gi|303276166|ref|XP_003057377.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226461729|gb|EEH59022.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 204
Score = 89.7 bits (221), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 87/183 (47%), Gaps = 9/183 (4%)
Query: 19 AGQEEFDAITKAYYRG----AQACVIT-FSTIDRDSFEAAHSWKMKVSIKRTIKECEGEE 73
A +++D + K G ++C++ FS DSF + + + K E +G+
Sbjct: 3 AVNQQYDHLIKLLLIGDSGVGKSCLLLRFSD---DSFTTSFITTIGIDFKIRTVELDGKR 59
Query: 74 VRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGE-IPT 132
V+L +WDTAGQE F IT AYYRGA ++T+ D SF +W +E E +
Sbjct: 60 VKLQIWDTAGQERFRTITTAYYRGAMGILLTYDVTDETSFNNVRNWMRNIEQHASENVNK 119
Query: 133 VLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSELRQQ 192
+LV NK D+ D+ V++ L+ G TS K ++ V F + + L+
Sbjct: 120 ILVGNKCDMEDKRVISHARGKALADEFGIPFFETSAKANVKVEDAFFSIARDIKNRLKSD 179
Query: 193 EEE 195
+E
Sbjct: 180 KEN 182
Score = 60.1 bits (144), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 40/72 (55%), Gaps = 6/72 (8%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVSIKRTI 66
+G+ V+L +WDTAGQE F IT AYYRGA ++T+ D SF +W R I
Sbjct: 56 DGKRVKLQIWDTAGQERFRTITTAYYRGAMGILLTYDVTDETSFNNVRNW------MRNI 109
Query: 67 KECEGEEVRLML 78
++ E V +L
Sbjct: 110 EQHASENVNKIL 121
>gi|326506468|dbj|BAJ86552.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326516366|dbj|BAJ92338.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 203
Score = 89.7 bits (221), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 47/132 (35%), Positives = 70/132 (53%), Gaps = 1/132 (0%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
DS+ ++ + V K E +G+ ++L +WDTAGQE F IT +YYRGA +I +
Sbjct: 31 DSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDV 90
Query: 108 IDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
D+DSF W +++ E + +LV NK DL D+ V+ E A + +G M T
Sbjct: 91 TDQDSFNNVKQWLNEIDRYASENVNKLLVGNKCDLADKRAVSYETAKAFADEIGIPFMET 150
Query: 167 SVKEDINVNSIF 178
S K +NV F
Sbjct: 151 SAKNALNVEQAF 162
>gi|223649372|gb|ACN11444.1| Ras-related protein Rab-35 [Salmo salar]
Length = 211
Score = 89.7 bits (221), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 78/160 (48%), Gaps = 3/160 (1%)
Query: 34 GAQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKA 93
G + ++ F+ +SF ++ + V K + +GE V+L +WDTAGQE F IT
Sbjct: 23 GKSSLLLRFAD---NSFSGSYITTIGVDFKIRTVDIDGERVKLQIWDTAGQERFRTITST 79
Query: 94 YYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGEIPTVLVQNKIDLLDQSVVAPEEAD 153
YYR +I + + +SF W ++ C + +LV NK D + V ++A
Sbjct: 80 YYRNTHGVIIVYDVTNPESFVNVKRWLNEITQNCDNVCKILVGNKNDDPSKKQVDSQDAM 139
Query: 154 LLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSELRQQE 193
++G R+ TS KE+INV +F T L +Q +
Sbjct: 140 RFGESVGVRVFETSAKENINVEEMFMAFTHMVLRTKKQSQ 179
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 28/50 (56%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
+GE V+L +WDTAGQE F IT YYR +I + + +SF W
Sbjct: 56 DGERVKLQIWDTAGQERFRTITSTYYRNTHGVIIVYDVTNPESFVNVKRW 105
>gi|224001286|ref|XP_002290315.1| ypt1-like rab-type small G protein [Thalassiosira pseudonana
CCMP1335]
gi|220973737|gb|EED92067.1| ypt1-like rab-type small G protein [Thalassiosira pseudonana
CCMP1335]
Length = 201
Score = 89.7 bits (221), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 75/146 (51%), Gaps = 1/146 (0%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
D++ ++ + V K E +G+ ++L +WDTAGQE F IT +YYRGA ++ +
Sbjct: 31 DTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDV 90
Query: 108 IDRDSFEAAHSWKMKVEN-ECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
D +SF W +++ C + +LV NK DL + VV+ E+ + LG + T
Sbjct: 91 TDNESFNNVKQWLHEIDRYACENVNKLLVGNKCDLEGKRVVSTEQGKEFADGLGIEFLET 150
Query: 167 SVKEDINVNSIFRYLTTKCLSELRQQ 192
S K NV F + ++ + ++ Q
Sbjct: 151 SAKTSTNVEQAFLTMASQIKARMKNQ 176
>gi|112292985|dbj|BAF02870.1| Rab13 [Mus musculus]
Length = 202
Score = 89.7 bits (221), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 77/154 (50%), Gaps = 4/154 (2%)
Query: 34 GAQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKA 93
G +I F+ D+F + + + + K + EG+ ++L +WDTAGQE F IT A
Sbjct: 20 GKTCLIIRFA---EDNFNSTYISTIGIDFKIRTVDIEGKRIKLQVWDTAGQERFKTITTA 76
Query: 94 YYRGAQACVITFSTIDRDSFEAAHSWKMKV-ENECGEIPTVLVQNKIDLLDQSVVAPEEA 152
YYRGA ++ + D SFE +W + EN + +L+ NK D+ + V E+A
Sbjct: 77 YYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCDMEAKRQVQREQA 136
Query: 153 DLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCL 186
+ L+R R TS K +NV+ F L L
Sbjct: 137 EKLAREHRIRFFETSAKSSVNVDEAFSSLARDIL 170
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 43/75 (57%), Gaps = 7/75 (9%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVSIKRTI 66
EG+ ++L +WDTAGQE F IT AYYRGA ++ + D SFE +W ++I
Sbjct: 53 EGKRIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNW------MKSI 106
Query: 67 KECEGEEV-RLMLWD 80
KE V RL+L +
Sbjct: 107 KENASAGVERLLLGN 121
>gi|85106728|ref|XP_962242.1| GTP-binding protein SAS1 [Neurospora crassa OR74A]
gi|28923842|gb|EAA33006.1| GTP-binding protein SAS1 [Neurospora crassa OR74A]
gi|336470991|gb|EGO59152.1| GTP-binding protein SAS1 [Neurospora tetrasperma FGSC 2508]
gi|350292068|gb|EGZ73263.1| GTP-binding protein SAS1 [Neurospora tetrasperma FGSC 2509]
Length = 205
Score = 89.7 bits (221), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 74/149 (49%), Gaps = 4/149 (2%)
Query: 34 GAQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKA 93
G C++ FS DSF + + + K E +G+ V+L +WDTAGQE F IT A
Sbjct: 22 GKSCCLLRFS---EDSFTPSFITTIGIDFKIRTIELDGKRVKLQIWDTAGQERFRTITTA 78
Query: 94 YYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEA 152
YYRGA ++ + D SF +W VE E + +L+ NK D ++ V+ E+
Sbjct: 79 YYRGAMGILLVYDVTDERSFNNIRTWFANVEQHATEGVNKILIGNKCDWEEKRAVSKEQG 138
Query: 153 DLLSRALGCRLMRTSVKEDINVNSIFRYL 181
L+ LG + S K +IN+ F L
Sbjct: 139 QALADELGIPFLEVSAKANINIEEAFFSL 167
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 32/54 (59%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 60
+G+ V+L +WDTAGQE F IT AYYRGA ++ + D SF +W V
Sbjct: 55 DGKRVKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRTWFANV 108
>gi|147903729|ref|NP_001090677.1| RAB8B, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|117558080|gb|AAI27331.1| rab8b protein [Xenopus (Silurana) tropicalis]
Length = 207
Score = 89.7 bits (221), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 82/158 (51%), Gaps = 1/158 (0%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
D+F + + K E +G++++L +WDTAGQE F IT AYYRGA ++ +
Sbjct: 31 DAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDI 90
Query: 108 IDRDSFEAAHSWKMKV-ENECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
+ SF+ +W + E+ ++ +++ NK D+ D+ V+ E+ + L+ G + + T
Sbjct: 91 TNEKSFDNIKNWIRNIEEHASSDVERMILGNKCDMNDKRQVSREKGEKLAIDYGIKFLET 150
Query: 167 SVKEDINVNSIFRYLTTKCLSELRQQEEEYSINGNGLP 204
S K INV F L +++L ++ E G G P
Sbjct: 151 SAKSSINVEEAFFTLARDIMTKLNRKMNESISPGGGGP 188
>gi|21311975|ref|NP_080953.1| ras-related protein Rab-13 [Mus musculus]
gi|46577121|sp|Q9DD03.1|RAB13_MOUSE RecName: Full=Ras-related protein Rab-13; Flags: Precursor
gi|12832187|dbj|BAB22000.1| unnamed protein product [Mus musculus]
gi|20070865|gb|AAH27214.1| RAB13, member RAS oncogene family [Mus musculus]
gi|148683212|gb|EDL15159.1| RAB13, member RAS oncogene family [Mus musculus]
Length = 202
Score = 89.7 bits (221), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 77/154 (50%), Gaps = 4/154 (2%)
Query: 34 GAQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKA 93
G +I F+ D+F + + + + K + EG+ ++L +WDTAGQE F IT A
Sbjct: 20 GKTCLIIRFA---EDNFNSTYISTIGIDFKIRTVDIEGKRIKLQVWDTAGQERFKTITTA 76
Query: 94 YYRGAQACVITFSTIDRDSFEAAHSWKMKV-ENECGEIPTVLVQNKIDLLDQSVVAPEEA 152
YYRGA ++ + D SFE +W + EN + +L+ NK D+ + V E+A
Sbjct: 77 YYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCDMEAKRQVQREQA 136
Query: 153 DLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCL 186
+ L+R R TS K +NV+ F L L
Sbjct: 137 EKLAREHRIRFFETSAKSSVNVDEAFSSLARDIL 170
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 43/75 (57%), Gaps = 7/75 (9%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVSIKRTI 66
EG+ ++L +WDTAGQE F IT AYYRGA ++ + D SFE +W ++I
Sbjct: 53 EGKRIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNW------MKSI 106
Query: 67 KECEGEEV-RLMLWD 80
KE V RL+L +
Sbjct: 107 KENASAGVERLLLGN 121
>gi|224057960|ref|XP_002299410.1| predicted protein [Populus trichocarpa]
gi|118481403|gb|ABK92644.1| unknown [Populus trichocarpa]
gi|222846668|gb|EEE84215.1| predicted protein [Populus trichocarpa]
Length = 203
Score = 89.4 bits (220), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 76/159 (47%), Gaps = 5/159 (3%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
DS+ ++ + V K E +G+ ++L +WDTAGQE F IT +YYRGA +I +
Sbjct: 31 DSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDV 90
Query: 108 IDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
D++SF W +++ E + +LV NK DL VV+ E A + +G M T
Sbjct: 91 TDQESFNNVKQWLNEIDRYASENVNKLLVGNKSDLTANKVVSYETAKAFADEIGIPFMET 150
Query: 167 SVKEDINVNSIFRYLTTKCLSELRQQEEEYSINGNGLPP 205
S K INV F + + + Q N PP
Sbjct: 151 SAKNAINVEQAFMAMAADIKNRMASQPAA----NNARPP 185
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 32/50 (64%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
+G+ ++L +WDTAGQE F IT +YYRGA +I + D++SF W
Sbjct: 53 DGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQW 102
>gi|336270604|ref|XP_003350061.1| hypothetical protein SMAC_00950 [Sordaria macrospora k-hell]
gi|380095453|emb|CCC06926.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 205
Score = 89.4 bits (220), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 74/149 (49%), Gaps = 4/149 (2%)
Query: 34 GAQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKA 93
G C++ FS DSF + + + K E +G+ V+L +WDTAGQE F IT A
Sbjct: 22 GKSCCLLRFS---EDSFTPSFITTIGIDFKIRTIELDGKRVKLQIWDTAGQERFRTITTA 78
Query: 94 YYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEA 152
YYRGA ++ + D SF +W VE E + +L+ NK D ++ V+ E+
Sbjct: 79 YYRGAMGILLVYDVTDERSFNNIRTWFANVEQHATEGVNKILIGNKCDWEEKRAVSKEQG 138
Query: 153 DLLSRALGCRLMRTSVKEDINVNSIFRYL 181
L+ LG + S K +IN+ F L
Sbjct: 139 QALADELGIPFLEVSAKANINIEEAFFSL 167
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 32/54 (59%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 60
+G+ V+L +WDTAGQE F IT AYYRGA ++ + D SF +W V
Sbjct: 55 DGKRVKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRTWFANV 108
>gi|281202863|gb|EFA77065.1| Rab GTPase [Polysphondylium pallidum PN500]
Length = 202
Score = 89.4 bits (220), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 77/159 (48%), Gaps = 1/159 (0%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
D++ + + V K E G+ ++L +WDTAGQE F IT +YYRGA ++ +
Sbjct: 31 DTYSESFISTIGVDFKIRTIELNGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDV 90
Query: 108 IDRDSFEAAHSWKMKVEN-ECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
DR +F+ W +++ C + +LV NK DL+ + VV A + LG + T
Sbjct: 91 TDRVTFDNVRQWLQEIDRFACESVNKLLVGNKSDLVAKKVVDTNTAKSFADTLGIPFLET 150
Query: 167 SVKEDINVNSIFRYLTTKCLSELRQQEEEYSINGNGLPP 205
S K+ NV F + T+ + L + + G + P
Sbjct: 151 SAKQSTNVEQAFMTMATEIKNRLTASQPAPTTGGAKVVP 189
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 31/50 (62%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
G+ ++L +WDTAGQE F IT +YYRGA ++ + DR +F+ W
Sbjct: 53 NGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDRVTFDNVRQW 102
>gi|213514896|ref|NP_001134562.1| ras-related protein Rab-35 [Salmo salar]
gi|209734286|gb|ACI68012.1| Ras-related protein Rab-35 [Salmo salar]
gi|209734894|gb|ACI68316.1| Ras-related protein Rab-35 [Salmo salar]
Length = 201
Score = 89.4 bits (220), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 71/142 (50%), Gaps = 5/142 (3%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
++F ++ + V K GE+V+L +WDTAGQE F IT YYRG ++ +
Sbjct: 31 NTFSGSYITTIGVDFKIRTVVINGEKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDV 90
Query: 108 IDRDSFEAAHSWKMKVENECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTS 167
+SF W ++ C ++ +LV NK D + VV +A + +G L TS
Sbjct: 91 TSAESFVNVKRWLHEINQNCDDVCRILVGNKNDDPNSKVVETTDAQKFAEQMGINLFETS 150
Query: 168 VKEDINVNSIFRYLTTKCLSEL 189
KE+INV +F C++EL
Sbjct: 151 AKENINVEEMF-----NCITEL 167
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 29/52 (55%)
Query: 5 ICEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
+ GE+V+L +WDTAGQE F IT YYRG ++ + +SF W
Sbjct: 51 VINGEKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRW 102
>gi|367022590|ref|XP_003660580.1| hypothetical protein MYCTH_2314205 [Myceliophthora thermophila ATCC
42464]
gi|347007847|gb|AEO55335.1| hypothetical protein MYCTH_2314205 [Myceliophthora thermophila ATCC
42464]
Length = 205
Score = 89.4 bits (220), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 74/149 (49%), Gaps = 4/149 (2%)
Query: 34 GAQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKA 93
G C++ FS DSF + + + K E +G+ V+L +WDTAGQE F IT A
Sbjct: 22 GKSCCLLRFS---EDSFTPSFITTIGIDFKIRTIELDGKRVKLQIWDTAGQERFRTITTA 78
Query: 94 YYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEA 152
YYRGA ++ + D SF +W VE E + +L+ NK D ++ VV+ E
Sbjct: 79 YYRGAMGILLVYDVTDERSFNNIRTWFANVEQHATEGVNKILIGNKCDWEEKRVVSTERG 138
Query: 153 DLLSRALGCRLMRTSVKEDINVNSIFRYL 181
L+ LG + S K + N++ F L
Sbjct: 139 QQLADELGIPFLEVSAKTNTNIDKAFYSL 167
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 32/54 (59%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 60
+G+ V+L +WDTAGQE F IT AYYRGA ++ + D SF +W V
Sbjct: 55 DGKRVKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRTWFANV 108
>gi|254570485|ref|XP_002492352.1| Secretory vesicle-associated Rab GTPase essential for exocytosis
[Komagataella pastoris GS115]
gi|12381851|emb|CAC24717.1| Sec4p [Komagataella pastoris]
gi|238032150|emb|CAY70093.1| Secretory vesicle-associated Rab GTPase essential for exocytosis
[Komagataella pastoris GS115]
gi|328353638|emb|CCA40036.1| Ras-related protein RIC1 [Komagataella pastoris CBS 7435]
Length = 204
Score = 89.4 bits (220), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 75/148 (50%), Gaps = 1/148 (0%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
DSF + + + K E G++V+L +WDTAGQE F IT AYYRGA ++ +
Sbjct: 37 DSFNPSFITTIGIDFKIRTVEINGKKVKLQIWDTAGQERFRTITTAYYRGAMGIILVYDV 96
Query: 108 IDRDSFEAAHSWKMKVENECGEIPTV-LVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
D SF + H+W + E + LV NK D + V E+ + L+ LG +
Sbjct: 97 TDERSFNSVHNWYQTLNQHANEDAQLFLVGNKCDDEESRQVTKEQGEQLASELGVPFLEA 156
Query: 167 SVKEDINVNSIFRYLTTKCLSELRQQEE 194
S K + NV++IF L + ++R ++
Sbjct: 157 SAKSNKNVDAIFLELAKRFEEKMRNTQQ 184
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 42/71 (59%), Gaps = 6/71 (8%)
Query: 8 GEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVSIKRTIK 67
G++V+L +WDTAGQE F IT AYYRGA ++ + D SF + H+W +T+
Sbjct: 60 GKKVKLQIWDTAGQERFRTITTAYYRGAMGIILVYDVTDERSFNSVHNW------YQTLN 113
Query: 68 ECEGEEVRLML 78
+ E+ +L L
Sbjct: 114 QHANEDAQLFL 124
>gi|307212138|gb|EFN87994.1| Ras-related protein Rab-8A [Harpegnathos saltator]
Length = 209
Score = 89.4 bits (220), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 77/148 (52%), Gaps = 1/148 (0%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
D+F + + K E +G++++L +WDTAGQE F IT AYYRGA ++ +
Sbjct: 31 DAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDV 90
Query: 108 IDRDSFEAAHSWKMKV-ENECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
+ SFE +W + EN ++ +L+ NK +L+D+ V E + L+ G + M T
Sbjct: 91 TNDKSFENIKNWIRNIEENASADVEKMLLGNKCELIDKRQVTKERGEQLAVEYGIKFMET 150
Query: 167 SVKEDINVNSIFRYLTTKCLSELRQQEE 194
S K INV F L +++ ++ E
Sbjct: 151 SAKSSINVEEAFYTLARDIKAKMEKKLE 178
>gi|225717542|gb|ACO14617.1| Ras-related protein Rab-3 [Caligus clemensi]
Length = 359
Score = 89.4 bits (220), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 72/135 (53%), Gaps = 1/135 (0%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
DSF +A + + K + + V+L +WDTAGQE + IT AYYRGA ++ +
Sbjct: 186 DSFTSAFVSTVGIDFKVKTVFRQDKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDV 245
Query: 108 IDRDSFEAAHSWKMKVENEC-GEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
+ DSF H W +++ +LV NK D+ D+ V++ E L+ +LG T
Sbjct: 246 TNEDSFNHVHDWCTQIKTYSWDNAQVILVGNKCDMEDERVISFERGKQLADSLGLEFFET 305
Query: 167 SVKEDINVNSIFRYL 181
S KE+INV ++F L
Sbjct: 306 SAKENINVRAVFERL 320
>gi|45360691|ref|NP_989019.1| RAB35, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|38174140|gb|AAH61434.1| RAB35, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|89268698|emb|CAJ82712.1| RAB35, member RAS oncogene family [Xenopus (Silurana) tropicalis]
Length = 201
Score = 89.4 bits (220), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 80/156 (51%), Gaps = 8/156 (5%)
Query: 34 GAQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKA 93
G + ++ F+ ++F ++ + V K E GE+V+L +WDTAGQE F IT
Sbjct: 20 GKSSLLLRFAD---NTFSGSYITTIGVDFKIRTVEINGEKVKLQIWDTAGQERFRTITST 76
Query: 94 YYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGEIPTVLVQNKIDLLDQSVVAPEEAD 153
YYRG ++ + +SF W ++ C ++ +LV NK D ++ VV E+A
Sbjct: 77 YYRGTHGVIVVYDVTSAESFVNVKRWLHEINQNCDDVCRILVGNKNDDPERKVVETEDAY 136
Query: 154 LLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSEL 189
+ + +L TS KE++NV +F C++EL
Sbjct: 137 KFAAQMDIQLFETSAKENLNVEEMF-----NCITEL 167
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 28/49 (57%)
Query: 8 GEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
GE+V+L +WDTAGQE F IT YYRG ++ + +SF W
Sbjct: 54 GEKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRW 102
>gi|156393953|ref|XP_001636591.1| predicted protein [Nematostella vectensis]
gi|156223696|gb|EDO44528.1| predicted protein [Nematostella vectensis]
Length = 200
Score = 89.4 bits (220), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 75/149 (50%), Gaps = 2/149 (1%)
Query: 50 FEAAHSWKMKVSIK-RTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTI 108
F ++ + V K RTI +GE+V+L +WDTAGQE F IT YYRG ++ +
Sbjct: 33 FSGSYITTIGVDFKIRTI-NIDGEKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVT 91
Query: 109 DRDSFEAAHSWKMKVENECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSV 168
D+F W +++ C ++ +LV NK D + VV + + R+ TS
Sbjct: 92 SADTFVNVKRWLHEIDQNCDDVIRILVGNKDDCPSKKVVETADLQKFGEQMNIRVFETSA 151
Query: 169 KEDINVNSIFRYLTTKCLSELRQQEEEYS 197
KE+INV IF +T L + + + + S
Sbjct: 152 KENINVEEIFSSITKLVLEKKKADQVKQS 180
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 29/50 (58%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
+GE+V+L +WDTAGQE F IT YYRG ++ + D+F W
Sbjct: 53 DGEKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSADTFVNVKRW 102
>gi|140832723|gb|AAI35799.1| rab8b protein [Xenopus (Silurana) tropicalis]
Length = 205
Score = 89.4 bits (220), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 82/158 (51%), Gaps = 1/158 (0%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
D+F + + K E +G++++L +WDTAGQE F IT AYYRGA ++ +
Sbjct: 29 DAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDI 88
Query: 108 IDRDSFEAAHSWKMKV-ENECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
+ SF+ +W + E+ ++ +++ NK D+ D+ V+ E+ + L+ G + + T
Sbjct: 89 TNEKSFDNIKNWIRNIEEHASSDVERMILGNKCDMNDKRQVSREKGEKLAIDYGIKFLET 148
Query: 167 SVKEDINVNSIFRYLTTKCLSELRQQEEEYSINGNGLP 204
S K INV F L +++L ++ E G G P
Sbjct: 149 SAKSSINVEEAFFTLARDIMTKLNRKMNESISPGGGGP 186
>gi|195393122|ref|XP_002055203.1| GJ18919 [Drosophila virilis]
gi|194149713|gb|EDW65404.1| GJ18919 [Drosophila virilis]
Length = 229
Score = 89.4 bits (220), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 82/153 (53%), Gaps = 5/153 (3%)
Query: 35 AQACVITFSTIDR---DSFEAAHSWKMKVS-IKRTIKECEGEEVRLMLWDTAGQEEFDAI 90
+ CV S + R D F H ++ S + + + + + +L +WDTAGQE F A+
Sbjct: 20 GEGCVGKTSLVLRYMEDKFNTQHLSTLQASFVTKKVTLPDEQRAQLNIWDTAGQERFHAL 79
Query: 91 TKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENECG-EIPTVLVQNKIDLLDQSVVAP 149
YYRG+ ++ + D+DSF+ SW +++ G EI ++V NK DL DQ ++
Sbjct: 80 GPIYYRGSDGALLVYDITDQDSFQKVKSWVRELKQMRGSEIALIIVGNKTDLEDQRAISY 139
Query: 150 EEADLLSRALGCRLMRTSVKEDINVNSIFRYLT 182
E A ++ +G + + TS KE+ VN +F LT
Sbjct: 140 ETALRYAQTVGAQYVETSAKENEGVNELFELLT 172
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 6/70 (8%)
Query: 9 EEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKE 68
+ +L +WDTAGQE F A+ YYRG+ ++ + D+DSF+ SW R +K+
Sbjct: 61 QRAQLNIWDTAGQERFHALGPIYYRGSDGALLVYDITDQDSFQKVKSW------VRELKQ 114
Query: 69 CEGEEVRLML 78
G E+ L++
Sbjct: 115 MRGSEIALII 124
>gi|27469883|gb|AAH41759.1| RAB35 protein, partial [Xenopus laevis]
Length = 227
Score = 89.4 bits (220), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 80/156 (51%), Gaps = 8/156 (5%)
Query: 34 GAQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKA 93
G + ++ F+ ++F ++ + V K E GE+V+L +WDTAGQE F IT
Sbjct: 46 GKSSLLLRFAD---NTFSGSYITTIGVDFKIRTVEINGEKVKLQIWDTAGQERFRTITST 102
Query: 94 YYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGEIPTVLVQNKIDLLDQSVVAPEEAD 153
YYRG ++ + +SF W ++ C ++ +LV NK D ++ VV E+A
Sbjct: 103 YYRGTHGVIVVYDVTSAESFVNVKRWLHEINQNCDDVCRILVGNKNDDPERKVVETEDAF 162
Query: 154 LLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSEL 189
+ + +L TS KE++NV +F C++EL
Sbjct: 163 KFAGQMDIQLFETSAKENLNVEEMF-----NCITEL 193
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 28/49 (57%)
Query: 8 GEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
GE+V+L +WDTAGQE F IT YYRG ++ + +SF W
Sbjct: 80 GEKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRW 128
>gi|156838990|ref|XP_001643191.1| hypothetical protein Kpol_1011p3 [Vanderwaltozyma polyspora DSM
70294]
gi|156113790|gb|EDO15333.1| hypothetical protein Kpol_1011p3 [Vanderwaltozyma polyspora DSM
70294]
Length = 214
Score = 89.4 bits (220), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 91/186 (48%), Gaps = 10/186 (5%)
Query: 22 EEFDAITKAYYRG----AQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLM 77
+ +D+I K G ++C++ +D D F + + + K E G++++L
Sbjct: 14 KNYDSIMKILLIGDSGVGKSCLLV-RFVD-DKFNPSFITTIGIDFKIKTVEINGKKIKLQ 71
Query: 78 LWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW-KMKVENECGEIPTVLVQ 136
LWDTAGQE F IT AYYRGA ++ + D +F W K E+ E +LV
Sbjct: 72 LWDTAGQERFRTITTAYYRGAMGIILVYDVTDEKTFANIRQWFKTVTEHANDEAQLLLVG 131
Query: 137 NKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSELRQQEEEY 196
NK D +D V E+ + LS+ LG + +S K D NVN IF L K + E +
Sbjct: 132 NKSD-MDTRAVTYEQGEELSKELGIPFIESSAKNDENVNEIFSTL-AKLIQE-KIDSNRL 188
Query: 197 SINGNG 202
+ NG G
Sbjct: 189 AANGTG 194
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 46/91 (50%), Gaps = 8/91 (8%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVSIKRTI 66
G++++L LWDTAGQE F IT AYYRGA ++ + D +F W +T+
Sbjct: 64 NGKKIKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDEKTFANIRQW------FKTV 117
Query: 67 KECEGEEVRLMLWDTAGQEEFDAITKAYYRG 97
E +E +L+L + + D Y +G
Sbjct: 118 TEHANDEAQLLL--VGNKSDMDTRAVTYEQG 146
>gi|296819571|ref|XP_002849869.1| GTP-binding protein SAS1 [Arthroderma otae CBS 113480]
gi|238840322|gb|EEQ29984.1| GTP-binding protein SAS1 [Arthroderma otae CBS 113480]
Length = 205
Score = 89.4 bits (220), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 80/171 (46%), Gaps = 9/171 (5%)
Query: 19 AGQEEFDAITKAYYRGAQA-----CVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEE 73
AG +D + K G C++ FS DSF + + + K +G+
Sbjct: 2 AGTRNYDFLIKLLLIGDSGVGKSCCLLRFS---EDSFTPSFITTIGIDFKIRTINLDGKR 58
Query: 74 VRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGE-IPT 132
V+L +WDTAGQE F IT AYYR A ++ + D SF+ +W VE E +
Sbjct: 59 VKLQIWDTAGQERFRTITTAYYRNAMGILLVYDVTDERSFKNIRTWFSNVEQHASEGVHK 118
Query: 133 VLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLTT 183
+L+ NK D ++ V E+ L+ LG + S K +INV+ F L T
Sbjct: 119 ILIGNKCDGEEKRAVTVEQGQQLANELGIPFLEVSAKNNINVDKAFYSLAT 169
>gi|397776464|gb|AFO64930.1| Rab3 [Ruditapes philippinarum]
Length = 219
Score = 89.4 bits (220), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 49/135 (36%), Positives = 72/135 (53%), Gaps = 1/135 (0%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
DSF +A + + K + + V+L +WDTAGQE + IT AYYRGA ++ +
Sbjct: 44 DSFTSAFVSTVGIDFKVKTVFRQDKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDV 103
Query: 108 IDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
+ +SF A W +++ + VLV NK DL D+ VV+ E L+ LG T
Sbjct: 104 TNEESFNAVQDWCTQIKTYSWDNAQVVLVGNKCDLEDERVVSTERGKQLADQLGLEFFET 163
Query: 167 SVKEDINVNSIFRYL 181
S KE+INV ++F L
Sbjct: 164 SAKENINVKAVFERL 178
>gi|315040511|ref|XP_003169633.1| GTP-binding protein [Arthroderma gypseum CBS 118893]
gi|311346323|gb|EFR05526.1| GTP-binding protein [Arthroderma gypseum CBS 118893]
Length = 206
Score = 89.4 bits (220), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 80/171 (46%), Gaps = 9/171 (5%)
Query: 19 AGQEEFDAITKAYYRGAQA-----CVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEE 73
AG +D + K G C++ FS DSF + + + K +G+
Sbjct: 2 AGTRNYDFLIKLLLIGDSGVGKSCCLLRFS---EDSFTPSFITTIGIDFKIRTINLDGKR 58
Query: 74 VRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGE-IPT 132
V+L +WDTAGQE F IT AYYR A ++ + D SF+ +W VE E +
Sbjct: 59 VKLQIWDTAGQERFRTITTAYYRNAMGILLVYDVTDERSFKNIRTWFSNVEQHASEGVHK 118
Query: 133 VLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLTT 183
+L+ NK D ++ V E+ L+ LG + S K +INV+ F L T
Sbjct: 119 ILIGNKCDGEEKRAVTVEQGQQLANELGIPFLEVSAKNNINVDKAFYSLAT 169
>gi|449458992|ref|XP_004147230.1| PREDICTED: GTP-binding protein YPTM2-like [Cucumis sativus]
gi|449517559|ref|XP_004165813.1| PREDICTED: GTP-binding protein YPTM2-like [Cucumis sativus]
Length = 202
Score = 89.4 bits (220), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 79/159 (49%), Gaps = 6/159 (3%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
DS+ ++ + V K E +G+ ++L +WDTAGQE F IT +YYRGA ++ +
Sbjct: 31 DSYLDSYISTIGVDFKIRTVELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDV 90
Query: 108 IDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
D+DSF W +++ E + +LV NK DL VV+ E A + +G M T
Sbjct: 91 TDQDSFNNVKQWLNEIDRYASENVNKLLVGNKSDLTANKVVSYETAKAFADEIGIPFMET 150
Query: 167 SVKEDINVNSIFRYLTTKCLSELRQQEEEYSINGNGLPP 205
S K NV F + +E++ + +N N PP
Sbjct: 151 SAKSATNVEQAFMAMA----AEIKNRMATQPMN-NARPP 184
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 32/50 (64%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
+G+ ++L +WDTAGQE F IT +YYRGA ++ + D+DSF W
Sbjct: 53 DGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQDSFNNVKQW 102
>gi|221482114|gb|EEE20475.1| small GTP-binding protein domain-containing protein [Toxoplasma
gondii GT1]
Length = 230
Score = 89.4 bits (220), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 80/155 (51%), Gaps = 1/155 (0%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
D++ ++ + V K + +G+ V+L +WDTAGQE F IT +YYRGA +I +
Sbjct: 59 DTYTESYISTIGVDFKIRTIDLDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDV 118
Query: 108 IDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
DR+SF +W M+++ E + +LV NK DL + V EE + + R + T
Sbjct: 119 TDRESFNNVKNWMMEIDKYAMEGVSKLLVGNKCDLTSKRTVTYEEGKEFADSCNMRFIET 178
Query: 167 SVKEDINVNSIFRYLTTKCLSELRQQEEEYSINGN 201
S K NV F + ++ + ++ +++ N N
Sbjct: 179 SAKNAHNVEQAFHIMASEIKARVQVNQQQSRPNAN 213
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 36/54 (66%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 60
+G+ V+L +WDTAGQE F IT +YYRGA +I + DR+SF +W M++
Sbjct: 81 DGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDRESFNNVKNWMMEI 134
>gi|68534613|gb|AAH99268.1| RAB35 protein, partial [Xenopus laevis]
Length = 233
Score = 89.4 bits (220), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 74/142 (52%), Gaps = 5/142 (3%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
++F ++ + V K E GE+V+L +WDTAGQE F IT YYRG ++ +
Sbjct: 63 NTFSGSYITTIGVDFKIRTVEINGEKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDV 122
Query: 108 IDRDSFEAAHSWKMKVENECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTS 167
+SF W ++ C ++ +LV NK D ++ VV E+A + + +L TS
Sbjct: 123 TSAESFVNVKRWLHEINQNCDDVCRILVGNKNDDPERKVVETEDAFKFAGQMDIQLFETS 182
Query: 168 VKEDINVNSIFRYLTTKCLSEL 189
KE++NV +F C++EL
Sbjct: 183 AKENLNVEEMF-----NCITEL 199
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 28/49 (57%)
Query: 8 GEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
GE+V+L +WDTAGQE F IT YYRG ++ + +SF W
Sbjct: 86 GEKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRW 134
>gi|326667537|ref|XP_001334079.4| PREDICTED: ras-related protein Rab-35-like, partial [Danio rerio]
Length = 182
Score = 89.4 bits (220), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 72/144 (50%), Gaps = 3/144 (2%)
Query: 34 GAQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKA 93
G + ++ F+ ++F ++ + V K E GE+V+L +WDTAGQE F IT
Sbjct: 20 GKSSLLLRFAD---NTFSGSYITTIGVDFKIRTVEINGEKVKLQIWDTAGQERFRTITST 76
Query: 94 YYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGEIPTVLVQNKIDLLDQSVVAPEEAD 153
YYRG ++ + +SF W ++ C ++ +LV NK D VV +A
Sbjct: 77 YYRGTHGVIVVYDVTSAESFVNVKRWLHEINQNCDDVCRILVGNKNDDPASKVVETNDAQ 136
Query: 154 LLSRALGCRLMRTSVKEDINVNSI 177
+ +G RL TS KE++NV +
Sbjct: 137 KFAEQMGIRLFETSAKENLNVEDV 160
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 31/55 (56%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVS 61
GE+V+L +WDTAGQE F IT YYRG ++ + +SF W +++
Sbjct: 53 NGEKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEIN 107
>gi|46249671|gb|AAH68969.1| RAB35 protein, partial [Xenopus laevis]
Length = 231
Score = 89.4 bits (220), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 74/142 (52%), Gaps = 5/142 (3%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
++F ++ + V K E GE+V+L +WDTAGQE F IT YYRG ++ +
Sbjct: 61 NTFSGSYITTIGVDFKIRTVEINGEKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDV 120
Query: 108 IDRDSFEAAHSWKMKVENECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTS 167
+SF W ++ C ++ +LV NK D ++ VV E+A + + +L TS
Sbjct: 121 TSAESFVNVKRWLHEINQNCDDVCRILVGNKNDDPERKVVETEDAFKFAGQMDIQLFETS 180
Query: 168 VKEDINVNSIFRYLTTKCLSEL 189
KE++NV +F C++EL
Sbjct: 181 AKENLNVEEMF-----NCITEL 197
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 28/49 (57%)
Query: 8 GEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
GE+V+L +WDTAGQE F IT YYRG ++ + +SF W
Sbjct: 84 GEKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRW 132
>gi|391344946|ref|XP_003746755.1| PREDICTED: ras-related protein Rab-35-like [Metaseiulus
occidentalis]
Length = 203
Score = 89.4 bits (220), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 81/160 (50%), Gaps = 5/160 (3%)
Query: 34 GAQACVITFSTIDRDSFEAAHSWKMKVSIK-RTIKECEGEEVRLMLWDTAGQEEFDAITK 92
G + ++ F+ ++F + + V K RTI E +GE V+L +WDTAGQE F IT
Sbjct: 19 GKSSLLLRFAD---NTFSGNYITTIGVDFKIRTI-EVDGERVKLQIWDTAGQERFRTITS 74
Query: 93 AYYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGEIPTVLVQNKIDLLDQSVVAPEEA 152
YYRG ++ + + +SF W +++ C + +LV NK D + VV E+A
Sbjct: 75 TYYRGTHGVIVVYDVTNGESFANVKRWLHEIDQNCDVVNRILVGNKNDDPQRKVVLTEDA 134
Query: 153 DLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSELRQQ 192
+ + L TS K++ NV +F +T L +++
Sbjct: 135 QAFADRMNIELFETSAKDNFNVEEMFNAVTRMVLKTKKEE 174
Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 29/51 (56%)
Query: 6 CEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
+GE V+L +WDTAGQE F IT YYRG ++ + + +SF W
Sbjct: 51 VDGERVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTNGESFANVKRW 101
>gi|321457381|gb|EFX68468.1| hypothetical protein DAPPUDRAFT_301441 [Daphnia pulex]
Length = 201
Score = 89.4 bits (220), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 84/164 (51%), Gaps = 4/164 (2%)
Query: 34 GAQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKA 93
G I F D D+F + + K E +G++++L +WDTAGQE F IT +
Sbjct: 19 GVGKTCILFRFSD-DAFNTTFISTIGIDFKIKTIELQGKKIKLQIWDTAGQERFHTITTS 77
Query: 94 YYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEA 152
YYRGA ++ + +F+ W ++ E + +++ NK D+ D+ V+ E+
Sbjct: 78 YYRGAMGIMLVYDITSVKTFDNIAKWLRNIDEHANEDVEKMILGNKCDVEDKRAVSKEKG 137
Query: 153 DLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSEL--RQQEE 194
++++R G R M TS K +IN+ S F L L++ R+Q E
Sbjct: 138 EMIAREHGIRFMETSAKANINIESAFYELAQAILTKTCGREQAE 181
>gi|126277017|ref|XP_001366139.1| PREDICTED: ras-related protein Rab-8B-like [Monodelphis domestica]
Length = 207
Score = 89.4 bits (220), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 85/159 (53%), Gaps = 3/159 (1%)
Query: 48 DSFEAAHSWKMKVSIK-RTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFS 106
D+F + + K RTI E +G++++L +WDTAGQE F IT AYYRGA ++ +
Sbjct: 31 DAFNTTFISTIGIDFKIRTI-ELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYD 89
Query: 107 TIDRDSFEAAHSWKMKV-ENECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMR 165
+ SF+ +W + E+ ++ +++ NK D+ D+ V+ E + L+ G + +
Sbjct: 90 ITNEKSFDNIKNWIRNIEEHASSDVERMILGNKSDMNDKRQVSKERGEKLAIDYGIKFLE 149
Query: 166 TSVKEDINVNSIFRYLTTKCLSELRQQEEEYSINGNGLP 204
TS K INV F L +++L ++ + + G G P
Sbjct: 150 TSAKSSINVEEAFFTLARDIMTKLNRKMNDSNSPGAGGP 188
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 41/73 (56%), Gaps = 6/73 (8%)
Query: 6 CEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVSIKRT 65
+G++++L +WDTAGQE F IT AYYRGA ++ + + SF+ +W R
Sbjct: 52 LDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNW------IRN 105
Query: 66 IKECEGEEVRLML 78
I+E +V M+
Sbjct: 106 IEEHASSDVERMI 118
>gi|449266381|gb|EMC77434.1| Ras-related protein Rab-8B, partial [Columba livia]
Length = 170
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 81/142 (57%), Gaps = 2/142 (1%)
Query: 64 RTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 123
RTI E +G++++L +WDTAGQE F IT AYYRGA ++ + + SF+ +W +
Sbjct: 11 RTI-ELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNI 69
Query: 124 -ENECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLT 182
E+ ++ +++ NK D+ ++ V+ E+ + L+ G + + TS K INV F L
Sbjct: 70 EEHASSDVERMILGNKCDMNEKRQVSKEKGEKLAIDYGIKFLETSAKSSINVEEAFFTLA 129
Query: 183 TKCLSELRQQEEEYSINGNGLP 204
+++L ++ + S +G G P
Sbjct: 130 RDIMTKLNRKMNDNSSSGAGGP 151
>gi|344293487|ref|XP_003418454.1| PREDICTED: ras-related protein Rab-8B-like [Loxodonta africana]
Length = 183
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 80/142 (56%), Gaps = 2/142 (1%)
Query: 64 RTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 123
RTI E +G++++L +WDTAGQE F IT AYYRGA ++ + + SF+ +W +
Sbjct: 24 RTI-ELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNI 82
Query: 124 -ENECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLT 182
E+ ++ +++ NK D+ D+ V+ E + L+ G + + TS K NV F L
Sbjct: 83 EEHASSDVERMILGNKCDMNDKRQVSKERGEKLAIDYGIKFLETSAKSSTNVEEAFFTLA 142
Query: 183 TKCLSELRQQEEEYSINGNGLP 204
+++L ++ + +++G G P
Sbjct: 143 RDIMTKLNRKMNDSNLSGAGGP 164
>gi|91079074|ref|XP_975225.1| PREDICTED: similar to Rab-protein 10 CG17060-PA [Tribolium
castaneum]
gi|270003655|gb|EFA00103.1| hypothetical protein TcasGA2_TC002919 [Tribolium castaneum]
Length = 203
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 79/161 (49%), Gaps = 2/161 (1%)
Query: 34 GAQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKA 93
G I F D D+F + + K E G++++L +WDTAGQE F IT +
Sbjct: 19 GVGKTCILFRFSD-DAFTTTFISTIGIDFKIKTVELRGKKIKLQIWDTAGQERFHTITTS 77
Query: 94 YYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEA 152
YYRGA ++ + + SFE W ++ E + +++ NK D+ D+ V+ E
Sbjct: 78 YYRGAMGIMLVYDITNEKSFENIVKWLRNIDEHANEDVEKMILGNKCDMSDKRTVSKERG 137
Query: 153 DLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSELRQQE 193
+ ++R G R M TS K +IN++ F L L + +E
Sbjct: 138 ETIAREHGIRFMETSAKANINIDKAFNDLAEAILDKTAGRE 178
>gi|327292479|ref|XP_003230938.1| GTP-binding protein [Trichophyton rubrum CBS 118892]
gi|326466875|gb|EGD92328.1| GTP-binding protein [Trichophyton rubrum CBS 118892]
gi|326481140|gb|EGE05150.1| GTP-binding protein [Trichophyton equinum CBS 127.97]
Length = 206
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 80/171 (46%), Gaps = 9/171 (5%)
Query: 19 AGQEEFDAITKAYYRGAQA-----CVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEE 73
AG +D + K G C++ FS DSF + + + K +G+
Sbjct: 2 AGTRNYDFLIKLLLIGDSGVGKSCCLLRFS---EDSFTPSFITTIGIDFKIRTINLDGKR 58
Query: 74 VRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGE-IPT 132
V+L +WDTAGQE F IT AYYR A ++ + D SF+ +W VE E +
Sbjct: 59 VKLQIWDTAGQERFRTITTAYYRNAMGILLVYDVTDERSFKNIRTWFSNVEQHASEGVHK 118
Query: 133 VLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLTT 183
+L+ NK D ++ V E+ L+ LG + S K +INV+ F L T
Sbjct: 119 ILIGNKCDGEEKRAVTVEQGQQLANELGIPFLEVSAKNNINVDKAFYSLAT 169
>gi|307213108|gb|EFN88630.1| Ras-related protein Rab-10 [Harpegnathos saltator]
Length = 200
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 72/129 (55%), Gaps = 1/129 (0%)
Query: 68 ECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENEC 127
E G++++L +WDTAGQE F IT +YYRGA ++ + + +FE W ++
Sbjct: 52 ELRGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKTFENIVKWLRNIDEHA 111
Query: 128 GE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCL 186
E + +++ NK D+ D+ VV+ E+ + ++R G R M TS K +IN++ F L L
Sbjct: 112 NEDVEKMILGNKSDMEDKRVVSTEKGEAIAREHGIRFMETSAKANINIDQAFSELAEAIL 171
Query: 187 SELRQQEEE 195
+ +E +
Sbjct: 172 DKTHGKEPQ 180
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 39/71 (54%), Gaps = 6/71 (8%)
Query: 8 GEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVSIKRTIK 67
G++++L +WDTAGQE F IT +YYRGA ++ + + +FE W R I
Sbjct: 55 GKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKTFENIVKW------LRNID 108
Query: 68 ECEGEEVRLML 78
E E+V M+
Sbjct: 109 EHANEDVEKMI 119
>gi|195398659|ref|XP_002057938.1| GJ15815 [Drosophila virilis]
gi|194150362|gb|EDW66046.1| GJ15815 [Drosophila virilis]
Length = 204
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 80/161 (49%), Gaps = 2/161 (1%)
Query: 34 GAQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKA 93
G I F D D+F + + + K E G++++L +WDTAGQE F IT +
Sbjct: 19 GVGKTCILFRFSD-DAFTSTFISTIGIDFKIKTVELRGKKIKLQIWDTAGQERFHTITTS 77
Query: 94 YYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEA 152
YYRGA ++ + + SFE W ++ E + +++ NK D+ D+ VV+ E
Sbjct: 78 YYRGAMGIMLVYDITNEKSFENIVKWLRNIDEHANEDVEKMILGNKCDMGDKRVVSKERG 137
Query: 153 DLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSELRQQE 193
+ ++R G R M TS K +IN+ F L L + +E
Sbjct: 138 EAIAREHGIRFMETSAKSNINIERAFCELAEAILDKTSGRE 178
>gi|17737369|ref|NP_523419.1| Rab10 [Drosophila melanogaster]
gi|194893373|ref|XP_001977864.1| GG19277 [Drosophila erecta]
gi|195345923|ref|XP_002039518.1| GM23016 [Drosophila sechellia]
gi|195482026|ref|XP_002101878.1| GE17866 [Drosophila yakuba]
gi|2317272|dbj|BAA21744.1| Rab10 [Drosophila melanogaster]
gi|7295615|gb|AAF50924.1| Rab10 [Drosophila melanogaster]
gi|16648398|gb|AAL25464.1| LD39986p [Drosophila melanogaster]
gi|190649513|gb|EDV46791.1| GG19277 [Drosophila erecta]
gi|194134744|gb|EDW56260.1| GM23016 [Drosophila sechellia]
gi|194189402|gb|EDX02986.1| GE17866 [Drosophila yakuba]
gi|220946172|gb|ACL85629.1| Rab10-PA [synthetic construct]
gi|220955946|gb|ACL90516.1| Rab10-PA [synthetic construct]
Length = 204
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 74/146 (50%), Gaps = 2/146 (1%)
Query: 34 GAQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKA 93
G I F D D+F + + + K E G++++L +WDTAGQE F IT +
Sbjct: 19 GVGKTCILFRFSD-DAFTSTFISTIGIDFKIKTVELRGKKIKLQIWDTAGQERFHTITTS 77
Query: 94 YYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEA 152
YYRGA ++ + + SFE W ++ E + +++ NK D+ D+ VV E
Sbjct: 78 YYRGAMGIMLVYDITNEKSFENIVKWLRNIDEHANEDVEKMILGNKCDMTDKRVVNKERG 137
Query: 153 DLLSRALGCRLMRTSVKEDINVNSIF 178
+ ++R G R M TS K +IN+ F
Sbjct: 138 EAIAREHGIRFMETSAKSNINIERAF 163
>gi|47199772|emb|CAF87763.1| unnamed protein product [Tetraodon nigroviridis]
Length = 152
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/122 (36%), Positives = 64/122 (52%), Gaps = 5/122 (4%)
Query: 68 ECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENEC 127
E GE+V+L +WDTAGQE F IT YYRG ++ + +SF W ++ C
Sbjct: 2 EINGEKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEINQNC 61
Query: 128 GEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLS 187
++ +LV NK D + VV +A + +G L TS KE+INV +F C++
Sbjct: 62 DDVCRILVGNKNDDPNSKVVETTDAQKFAEQMGINLFETSAKENINVEEMF-----NCIT 116
Query: 188 EL 189
EL
Sbjct: 117 EL 118
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 28/49 (57%)
Query: 8 GEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
GE+V+L +WDTAGQE F IT YYRG ++ + +SF W
Sbjct: 5 GEKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRW 53
>gi|126631404|gb|AAI33763.1| RAB35 protein [Xenopus laevis]
Length = 248
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 74/142 (52%), Gaps = 5/142 (3%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
++F ++ + V K E GE+V+L +WDTAGQE F IT YYRG ++ +
Sbjct: 78 NTFSGSYITTIGVDFKIRTVEINGEKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDV 137
Query: 108 IDRDSFEAAHSWKMKVENECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTS 167
+SF W ++ C ++ +LV NK D ++ VV E+A + + +L TS
Sbjct: 138 TSAESFVNVKRWLHEINQNCDDVCRILVGNKNDDPERKVVETEDAFKFAGQMDIQLFETS 197
Query: 168 VKEDINVNSIFRYLTTKCLSEL 189
KE++NV +F C++EL
Sbjct: 198 AKENLNVEEMF-----NCITEL 214
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 28/49 (57%)
Query: 8 GEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
GE+V+L +WDTAGQE F IT YYRG ++ + +SF W
Sbjct: 101 GEKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRW 149
>gi|145508774|ref|XP_001440331.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74831449|emb|CAI39308.1| rab_C36 [Paramecium tetraurelia]
gi|124407548|emb|CAK72934.1| unnamed protein product [Paramecium tetraurelia]
Length = 184
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 70/137 (51%), Gaps = 3/137 (2%)
Query: 47 RDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFS 106
D F+ + V K E G+ ++L +WDTAGQE F I +YY+GA I +
Sbjct: 29 NDEFKEDFFPTIGVDFKLKQLEFNGKAIKLQIWDTAGQERFMTIVSSYYKGAHGFFIVYD 88
Query: 107 TIDRDSFEAAHSW--KMKVENECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLM 164
++ SFE W ++K++ ++P +L+ NK DL V PEE L+ LG + +
Sbjct: 89 VTNKQSFEEVAKWVDQLKIDTNP-DVPKILIGNKSDLNGAREVTPEEGQQLANTLGVQYI 147
Query: 165 RTSVKEDINVNSIFRYL 181
TS KE NV F+ L
Sbjct: 148 ETSAKEGFNVEHAFQTL 164
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 32/55 (58%)
Query: 8 GEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVSI 62
G+ ++L +WDTAGQE F I +YY+GA I + ++ SFE W ++ I
Sbjct: 53 GKAIKLQIWDTAGQERFMTIVSSYYKGAHGFFIVYDVTNKQSFEEVAKWVDQLKI 107
>gi|395860030|ref|XP_003802320.1| PREDICTED: ras-related protein Rab-13 [Otolemur garnettii]
Length = 201
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 76/154 (49%), Gaps = 4/154 (2%)
Query: 34 GAQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKA 93
G +I F+ D+F + + + K EG++++L +WDTAGQE F IT A
Sbjct: 20 GKTCLIIRFA---EDNFNNTYISTIGIDFKIRTVNIEGKKIKLQVWDTAGQERFKTITTA 76
Query: 94 YYRGAQACVITFSTIDRDSFEAAHSWKMKV-ENECGEIPTVLVQNKIDLLDQSVVAPEEA 152
YYRGA ++ + D SFE +W + E+ + +L+ NK D+ + V E+A
Sbjct: 77 YYRGAMGIILVYDITDEKSFENIQNWMKSIKEHASAGVERLLLGNKCDMEAKRRVQKEQA 136
Query: 153 DLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCL 186
D L++ G R TS K +NV F L L
Sbjct: 137 DKLAQEHGIRFFETSAKSSVNVAEAFSSLARDIL 170
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 45/80 (56%), Gaps = 7/80 (8%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVSIKRTI 66
EG++++L +WDTAGQE F IT AYYRGA ++ + D SFE +W ++I
Sbjct: 53 EGKKIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNW------MKSI 106
Query: 67 KECEGEEV-RLMLWDTAGQE 85
KE V RL+L + E
Sbjct: 107 KEHASAGVERLLLGNKCDME 126
>gi|1616614|emb|CAA69701.1| small GTP-binding protein [Nicotiana plumbaginifolia]
Length = 203
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 77/159 (48%), Gaps = 5/159 (3%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
DS+ ++ + V K E +G+ ++L +WDTAGQE F IT +YYRGA ++ +
Sbjct: 31 DSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDV 90
Query: 108 IDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
D++SF W +++ + + +LV NK DL Q VV+ E A + +G M T
Sbjct: 91 TDQESFNNVKQWLSEIDRYASDSVNKLLVGNKCDLTAQKVVSTETAQAFADEIGIPFMET 150
Query: 167 SVKEDINVNSIFRYLTTKCLSELRQQEEEYSINGNGLPP 205
S K NV F + + + Q + N PP
Sbjct: 151 SAKNATNVEQAFMAMAASIKNRMASQPA----SNNARPP 185
>gi|410927045|ref|XP_003976978.1| PREDICTED: ras-related protein Rab-35-like [Takifugu rubripes]
Length = 209
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 71/147 (48%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
+SF ++ + V K + GE V+L +WDTAGQE F IT YYR +I +
Sbjct: 32 NSFSGSYITTIGVDFKIRTVDINGERVKLQIWDTAGQERFRTITSTYYRNTHGVIIVYDV 91
Query: 108 IDRDSFEAAHSWKMKVENECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTS 167
+ +SF W ++ C + +LV NK D + V ++A ++G R+ TS
Sbjct: 92 TNPESFVNVKRWLNEISQNCDSVCKILVGNKNDDPARKRVDSQDAAHFGESVGVRVFETS 151
Query: 168 VKEDINVNSIFRYLTTKCLSELRQQEE 194
KE+INV +F T L +Q +
Sbjct: 152 AKENINVEEMFMAFTHMVLRAKKQSQN 178
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 30/55 (54%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVS 61
GE V+L +WDTAGQE F IT YYR +I + + +SF W ++S
Sbjct: 54 NGERVKLQIWDTAGQERFRTITSTYYRNTHGVIIVYDVTNPESFVNVKRWLNEIS 108
>gi|298707797|emb|CBJ30228.1| Rab1B, RAB family GTPase [Ectocarpus siliculosus]
Length = 203
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 74/146 (50%), Gaps = 1/146 (0%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
D++ ++ + V K E + + ++L +WDTAGQE F IT +YYRGA ++ +
Sbjct: 31 DTYTESYISTIGVDFKIRTIELDSKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDV 90
Query: 108 IDRDSFEAAHSWKMKVEN-ECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
D++SF W +++ C + +LV NK DL + V EEA + LG + T
Sbjct: 91 TDKESFNNVKQWLHEIDRYACENVNKLLVGNKSDLEAKRAVTTEEAKAFADTLGIEFLET 150
Query: 167 SVKEDINVNSIFRYLTTKCLSELRQQ 192
S K NV F + ++ S ++ Q
Sbjct: 151 SAKNASNVEKAFMMMASQIKSRMKSQ 176
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 31/50 (62%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
+ + ++L +WDTAGQE F IT +YYRGA ++ + D++SF W
Sbjct: 53 DSKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDKESFNNVKQW 102
>gi|209881799|ref|XP_002142337.1| Ras small GTPase RIC1/ypt1 protein [Cryptosporidium muris RN66]
gi|209557943|gb|EEA07988.1| Ras small GTPase RIC1/ypt1 protein, putative [Cryptosporidium muris
RN66]
Length = 203
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 71/135 (52%), Gaps = 1/135 (0%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
D++ ++ + V K E + V+L +WDTAGQE F IT +YYRGA +I +
Sbjct: 31 DTYTDSYISTIGVDFKIRTITLENKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDV 90
Query: 108 IDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
DRDSF+ W +++ E + +LV NK DL+ + VV +E L+ + G + + T
Sbjct: 91 TDRDSFDNVKQWIQEIDRYAMENVNKLLVGNKCDLVSKRVVTSDEGKELADSYGIKFIET 150
Query: 167 SVKEDINVNSIFRYL 181
S K NV F +
Sbjct: 151 SAKNAYNVEQAFHTM 165
>gi|51010929|ref|NP_001003419.1| ras-related protein Rab-3C [Danio rerio]
gi|50370044|gb|AAH75980.1| RAB3A, member RAS oncogene family [Danio rerio]
Length = 220
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 77/161 (47%), Gaps = 3/161 (1%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
DSF A + + K + ++L +WDTAGQE + IT AYYRGA ++ +
Sbjct: 45 DSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDI 104
Query: 108 IDRDSFEAAHSWKMKVENECGEIPTV-LVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
+ DSF A W +++ + V LV NK D+ D+ VVA + LS LG
Sbjct: 105 TNEDSFNAVQDWSTQIKTYSWDNAQVLLVGNKCDMEDERVVAGQRGRQLSEQLGFEFFEA 164
Query: 167 SVKEDINVNSIFRYLTTKCLSELRQQEE--EYSINGNGLPP 205
S K++INV F L + + E + S+ GN L P
Sbjct: 165 SAKDNINVKQTFERLVDVICERMSENLESADPSMTGNKLGP 205
>gi|118381174|ref|XP_001023748.1| small GTP-binding protein domain containing protein [Tetrahymena
thermophila]
gi|5738170|gb|AAD50282.1|AF169952_1 putative intermediate compartment protein [Tetrahymena thermophila]
gi|89305515|gb|EAS03503.1| small GTP-binding protein domain containing protein [Tetrahymena
thermophila SB210]
gi|307777888|dbj|BAJ21340.1| Rab-family small GTPase Rab2G [Tetrahymena thermophila]
Length = 207
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 84/161 (52%), Gaps = 4/161 (2%)
Query: 34 GAQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKA 93
G A ++ F F+A H + V I + +G+ V+L +WDTAGQE F +IT++
Sbjct: 18 GKSAILLQFM---EGKFKAEHDTTIGVEFGSKIIQVKGKNVKLQVWDTAGQESFKSITRS 74
Query: 94 YYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEA 152
YYRG+ + + +R+SF W + +N + I VLV NKIDL ++ V+ +E
Sbjct: 75 YYRGSICAFLVYDVTNRESFTNIQKWLEETQNYANDKITLVLVGNKIDLANKRQVSYDEG 134
Query: 153 DLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSELRQQE 193
++ + + TS K N++ +FR T L ++ ++
Sbjct: 135 HEFAQKQEIQFVETSAKMGQNIDQVFRKSTEDILQKIENRQ 175
Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 33/51 (64%)
Query: 6 CEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
+G+ V+L +WDTAGQE F +IT++YYRG+ + + +R+SF W
Sbjct: 50 VKGKNVKLQVWDTAGQESFKSITRSYYRGSICAFLVYDVTNRESFTNIQKW 100
>gi|350578544|ref|XP_001929064.4| PREDICTED: ras-related protein Rab-8B-like [Sus scrofa]
Length = 207
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 83/158 (52%), Gaps = 1/158 (0%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
D+F + + K E +G++++L +WDTAGQE F IT AYYRGA ++ +
Sbjct: 31 DAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDI 90
Query: 108 IDRDSFEAAHSWKMKV-ENECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
+ SF+ +W + E+ ++ +++ NK D+ D+ V+ E + L+ G + + T
Sbjct: 91 TNEKSFDNIKNWIRNIEEHASSDVERMILGNKCDMNDKRQVSKERGEKLAIDYGIKFLET 150
Query: 167 SVKEDINVNSIFRYLTTKCLSELRQQEEEYSINGNGLP 204
S K +NV F L +++L ++ + + +G G P
Sbjct: 151 SAKSSMNVEEAFFILARDIMTKLNRKMNDSNSSGAGGP 188
>gi|307171708|gb|EFN63443.1| Ras-related protein Rab-10 [Camponotus floridanus]
Length = 200
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 82/163 (50%), Gaps = 2/163 (1%)
Query: 34 GAQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKA 93
G I F D D+F + + K E G++++L +WDTAGQE F IT +
Sbjct: 19 GVGKTCILFRFSD-DAFSTTFISTIGIDFKIKTVELRGKKIKLQIWDTAGQERFHTITTS 77
Query: 94 YYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEA 152
YYRGA ++ + + +FE W ++ E + +++ NK D+ ++ VV+ E+
Sbjct: 78 YYRGAMGIMLVYDITNEKTFENIVKWLRNIDEHANEDVEKMILGNKSDMEEKRVVSTEKG 137
Query: 153 DLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSELRQQEEE 195
+ ++R G R M TS K +IN++ F L L + +E +
Sbjct: 138 EAIAREHGIRFMETSAKANINIDRAFSELAEAILDKTHGKEPQ 180
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 7/80 (8%)
Query: 8 GEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVSIKRTIK 67
G++++L +WDTAGQE F IT +YYRGA ++ + + +FE W R I
Sbjct: 55 GKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKTFENIVKW------LRNID 108
Query: 68 ECEGEEV-RLMLWDTAGQEE 86
E E+V +++L + + EE
Sbjct: 109 EHANEDVEKMILGNKSDMEE 128
>gi|301756855|ref|XP_002914277.1| PREDICTED: ras-related protein Rab-8B-like [Ailuropoda melanoleuca]
gi|281347305|gb|EFB22889.1| hypothetical protein PANDA_002150 [Ailuropoda melanoleuca]
Length = 207
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 86/159 (54%), Gaps = 3/159 (1%)
Query: 48 DSFEAAHSWKMKVSIK-RTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFS 106
D+F + + K RTI E +G++++L +WDTAGQE F IT AYYRGA ++ +
Sbjct: 31 DAFNTTFISTIGIDFKIRTI-ELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYD 89
Query: 107 TIDRDSFEAAHSWKMKV-ENECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMR 165
+ SF+ +W + E+ ++ +++ NK D+ D+ V+ E + L+ G + +
Sbjct: 90 ITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCDMNDKRQVSKERGEKLAIDYGIKFLE 149
Query: 166 TSVKEDINVNSIFRYLTTKCLSELRQQEEEYSINGNGLP 204
TS K NV F L +++L ++ + + +G+G P
Sbjct: 150 TSAKSSTNVEEAFFTLARDIMTKLNRKMNDSNSSGSGGP 188
>gi|312068043|ref|XP_003137028.1| small GTP binding protein [Loa loa]
Length = 209
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 76/157 (48%), Gaps = 1/157 (0%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
++F + + V K G+ V+L +WDTAGQE F IT YYRG ++ +
Sbjct: 36 NTFSPNYITTIGVDFKIRTVTINGQRVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYEV 95
Query: 108 IDRDSFEAAHSWKMKVENECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTS 167
DSF W +++ C + VLV NK D ++ VV +A + + TS
Sbjct: 96 TSGDSFSNVKRWLHEIDTNCENVQKVLVGNKADDPERRVVLEVDARRFAETMKIPFFETS 155
Query: 168 VKEDINVNSIFRYLTTKCL-SELRQQEEEYSINGNGL 203
KE+INV +F +T L ++LR + + +G G+
Sbjct: 156 AKENINVEEMFNCITRLVLEAKLRAPQPNIADSGGGV 192
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 27/49 (55%)
Query: 8 GEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
G+ V+L +WDTAGQE F IT YYRG ++ + DSF W
Sbjct: 59 GQRVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYEVTSGDSFSNVKRW 107
>gi|432911772|ref|XP_004078715.1| PREDICTED: ras-related protein Rab-3A-like [Oryzias latipes]
Length = 218
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/135 (36%), Positives = 68/135 (50%), Gaps = 1/135 (0%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
DSF A + + K + ++L +WDTAGQE + IT AYYRGA ++ +
Sbjct: 44 DSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDI 103
Query: 108 IDRDSFEAAHSWKMKVENECGEIPTVL-VQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
+ DSF A W +++ + VL V NK D+ D+ VVA E LLS LG
Sbjct: 104 TNEDSFNAVQDWSTQIKTYSWDNAQVLVVGNKCDVEDERVVASERGRLLSEQLGFEFFEA 163
Query: 167 SVKEDINVNSIFRYL 181
S K++INV F L
Sbjct: 164 SAKDNINVKQTFERL 178
>gi|326914544|ref|XP_003203585.1| PREDICTED: ras-related protein Rab-30-like [Meleagris gallopavo]
Length = 203
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/144 (36%), Positives = 74/144 (51%), Gaps = 1/144 (0%)
Query: 50 FEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTID 109
F + V E GE+V+L +WDTAGQE F +IT++YYR A A ++T+
Sbjct: 34 FPPGQGATIGVDFMIKTVEINGEKVKLQIWDTAGQERFRSITQSYYRSANALILTYDITC 93
Query: 110 RDSFEAAHSWKMKVEN-ECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSV 168
+SF W ++E ++ TVLV NKIDL D+ V+ + A S A + TS
Sbjct: 94 EESFRCLPEWLREIEQYASNKVITVLVGNKIDLADKREVSQQRAAEFSEAQDMYYLETSA 153
Query: 169 KEDINVNSIFRYLTTKCLSELRQQ 192
KE NV +F L + + E RQ
Sbjct: 154 KESDNVEKLFLDLACRLIREARQN 177
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 33/49 (67%)
Query: 8 GEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
GE+V+L +WDTAGQE F +IT++YYR A A ++T+ +SF W
Sbjct: 55 GEKVKLQIWDTAGQERFRSITQSYYRSANALILTYDITCEESFRCLPEW 103
>gi|395834086|ref|XP_003790046.1| PREDICTED: uncharacterized protein LOC100942506 [Otolemur
garnettii]
Length = 459
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/126 (36%), Positives = 70/126 (55%), Gaps = 6/126 (4%)
Query: 64 RTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 123
RT+ E GE+V+L +WDTAGQE F IT YYRG ++ + +SF W ++
Sbjct: 306 RTV-EINGEKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEI 364
Query: 124 ENECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLTT 183
C ++ +LV NK D ++ VV E+A + +G +L TS KE++NV +F
Sbjct: 365 NQNCDDVCRILVGNKNDDPERKVVETEDAYKFAGQMGIQLFETSAKENVNVEEMF----- 419
Query: 184 KCLSEL 189
C++EL
Sbjct: 420 NCITEL 425
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 28/49 (57%)
Query: 8 GEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
GE+V+L +WDTAGQE F IT YYRG ++ + +SF W
Sbjct: 312 GEKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRW 360
>gi|393911053|gb|EFO27043.2| small GTP binding protein, partial [Loa loa]
Length = 236
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 82/171 (47%), Gaps = 4/171 (2%)
Query: 34 GAQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKA 93
G + ++ F+ ++F + + V K G+ V+L +WDTAGQE F IT
Sbjct: 52 GKSSLLLRFAD---NTFSPNYITTIGVDFKIRTVTINGQRVKLQIWDTAGQERFRTITST 108
Query: 94 YYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGEIPTVLVQNKIDLLDQSVVAPEEAD 153
YYRG ++ + DSF W +++ C + VLV NK D ++ VV +A
Sbjct: 109 YYRGTHGVIVVYEVTSGDSFSNVKRWLHEIDTNCENVQKVLVGNKADDPERRVVLEVDAR 168
Query: 154 LLSRALGCRLMRTSVKEDINVNSIFRYLTTKCL-SELRQQEEEYSINGNGL 203
+ + TS KE+INV +F +T L ++LR + + +G G+
Sbjct: 169 RFAETMKIPFFETSAKENINVEEMFNCITRLVLEAKLRAPQPNIADSGGGV 219
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 27/49 (55%)
Query: 8 GEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
G+ V+L +WDTAGQE F IT YYRG ++ + DSF W
Sbjct: 86 GQRVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYEVTSGDSFSNVKRW 134
>gi|50287271|ref|XP_446065.1| hypothetical protein [Candida glabrata CBS 138]
gi|51701907|sp|O42819.1|SEC4_CANGA RecName: Full=Ras-related protein SEC4
gi|2959746|emb|CAA12071.1| putative SEC4 protein [Candida glabrata]
gi|49525372|emb|CAG58989.1| unnamed protein product [Candida glabrata]
Length = 215
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 86/176 (48%), Gaps = 8/176 (4%)
Query: 11 VRLMLWDTAGQEEFDAITKAYYRG----AQACVITFSTIDRDSFEAAHSWKMKVSIKRTI 66
+R + + + +D+I K G ++C++ D F + + + K
Sbjct: 4 LRTVSGSSGNGKSYDSIMKILLIGDSGVGKSCLLV--RFVEDKFNPSFITTIGIDFKIKT 61
Query: 67 KECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW-KMKVEN 125
+ G++V+L LWDTAGQE F IT AYYRGA ++ + D +F W K E+
Sbjct: 62 VDINGKKVKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFANIKQWFKTVNEH 121
Query: 126 ECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYL 181
E +LV NK D +D VV E+ + L++ LG + +S K D NVN IF L
Sbjct: 122 ANDEAQLLLVGNKSD-MDTRVVTYEQGEALAKELGLPFIESSAKNDDNVNEIFFTL 176
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 46/91 (50%), Gaps = 8/91 (8%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVSIKRTI 66
G++V+L LWDTAGQE F IT AYYRGA ++ + D +F W +T+
Sbjct: 65 NGKKVKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFANIKQW------FKTV 118
Query: 67 KECEGEEVRLMLWDTAGQEEFDAITKAYYRG 97
E +E +L+L + + D Y +G
Sbjct: 119 NEHANDEAQLLL--VGNKSDMDTRVVTYEQG 147
>gi|296483236|tpg|DAA25351.1| TPA: ras-related protein Rab-8B [Bos taurus]
gi|440907016|gb|ELR57209.1| Ras-related protein Rab-8B [Bos grunniens mutus]
Length = 207
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 86/159 (54%), Gaps = 3/159 (1%)
Query: 48 DSFEAAHSWKMKVSIK-RTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFS 106
D+F + + K RTI E +G++++L +WDTAGQE F IT AYYRGA ++ +
Sbjct: 31 DAFNTTFISTIGIDFKIRTI-ELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYD 89
Query: 107 TIDRDSFEAAHSWKMKV-ENECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMR 165
+ SF+ +W + E+ ++ +++ NK D+ D+ V+ E + L+ G + +
Sbjct: 90 ITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCDMNDKRQVSKERGEKLAIDYGIKFLE 149
Query: 166 TSVKEDINVNSIFRYLTTKCLSELRQQEEEYSINGNGLP 204
TS K +NV F L +++L ++ + + +G G P
Sbjct: 150 TSAKSSMNVEEAFFTLARDIMTKLNRKMNDSNSSGAGGP 188
>gi|357445237|ref|XP_003592896.1| Ras-like protein [Medicago truncatula]
gi|92893897|gb|ABE91947.1| Ras small GTPase, Rab type [Medicago truncatula]
gi|355481944|gb|AES63147.1| Ras-like protein [Medicago truncatula]
Length = 203
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 72/146 (49%), Gaps = 1/146 (0%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
DS++ + + V K E EG+ +L +WDTAGQE F IT +YYRGA +I +
Sbjct: 32 DSYDDTYISTIGVDFKIRTVELEGKTAKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDV 91
Query: 108 IDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
D +SF W +++ + +LV NK DL D +V A + LG + T
Sbjct: 92 TDIESFNNVKQWLHEIDRYANHSVSKLLVGNKCDLTDNKLVHTHTAKAFADELGIPFLET 151
Query: 167 SVKEDINVNSIFRYLTTKCLSELRQQ 192
S K+ INV F + + +++ Q
Sbjct: 152 SAKDSINVEQAFLTMAAEIKNKMGSQ 177
>gi|401424329|ref|XP_003876650.1| putative small GTP-binding protein Rab1 [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322492893|emb|CBZ28172.1| putative small GTP-binding protein Rab1 [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 200
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 79/161 (49%), Gaps = 3/161 (1%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
DS+ ++ + V K E + ++L +WDTAGQE F IT +YYRGA +I + T
Sbjct: 31 DSYTDSYISTIGVDFKIRTLNLESKVIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDT 90
Query: 108 IDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
D +SF +W ++E E + +LV NK DL+ + VV + A + +LG + T
Sbjct: 91 TDMESFNNVKTWLSEIEKYASENVNKILVGNKCDLVTKKVVDTQMAKDFADSLGIPFLET 150
Query: 167 SVKEDINVNSIFRYLTTKCLSELRQQEEEYSINGNGL--PP 205
S K NV F + + + L E S+ L PP
Sbjct: 151 SAKNSTNVEEAFIQMASGIKARLAVSGEAKSVTRPNLQNPP 191
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 32/50 (64%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
E + ++L +WDTAGQE F IT +YYRGA +I + T D +SF +W
Sbjct: 53 ESKVIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDTTDMESFNNVKTW 102
>gi|332031583|gb|EGI71055.1| Ras-related protein Rab-10 [Acromyrmex echinatior]
Length = 200
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 82/163 (50%), Gaps = 2/163 (1%)
Query: 34 GAQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKA 93
G I F D D+F + + K E G++++L +WDTAGQE F IT +
Sbjct: 19 GVGKTCILFRFSD-DAFSTTFISTIGIDFKIKTVELRGKKIKLQIWDTAGQERFHTITTS 77
Query: 94 YYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEA 152
YYRGA ++ + + +FE W ++ E + +++ NK D+ ++ VV+ E+
Sbjct: 78 YYRGAMGIMLVYDITNEKTFENIVKWLRNIDEHANEDVEKMILGNKSDMEEKRVVSTEKG 137
Query: 153 DLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSELRQQEEE 195
+ ++R G R M TS K +IN++ F L L + +E +
Sbjct: 138 EAIAREHGIRFMETSAKANINIDRAFSELAEAILDKTHGREPQ 180
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 7/80 (8%)
Query: 8 GEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVSIKRTIK 67
G++++L +WDTAGQE F IT +YYRGA ++ + + +FE W R I
Sbjct: 55 GKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKTFENIVKW------LRNID 108
Query: 68 ECEGEEV-RLMLWDTAGQEE 86
E E+V +++L + + EE
Sbjct: 109 EHANEDVEKMILGNKSDMEE 128
>gi|17555956|ref|NP_499454.1| Protein RAB-35 [Caenorhabditis elegans]
gi|6018411|emb|CAB57899.1| Protein RAB-35 [Caenorhabditis elegans]
Length = 209
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 72/140 (51%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
++F + + V K + G+ V+L +WDTAGQE F IT YYRG V+ +
Sbjct: 33 NTFSENYITTIGVDFKIRTMDINGQRVKLQIWDTAGQERFRTITSTYYRGTHGVVVVYDV 92
Query: 108 IDRDSFEAAHSWKMKVENECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTS 167
+ +SF W ++EN C + VLV NK + ++ VV +A ++++ TS
Sbjct: 93 TNGESFGNVKRWLQEIENNCDSVQKVLVGNKCEENERRVVLESDARNYAQSMNISFFETS 152
Query: 168 VKEDINVNSIFRYLTTKCLS 187
KED NV +F +T+ L+
Sbjct: 153 AKEDKNVEPMFTCITSLVLT 172
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 43/79 (54%), Gaps = 7/79 (8%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV-----S 61
G+ V+L +WDTAGQE F IT YYRG V+ + + +SF W ++ S
Sbjct: 55 NGQRVKLQIWDTAGQERFRTITSTYYRGTHGVVVVYDVTNGESFGNVKRWLQEIENNCDS 114
Query: 62 IKRTI--KECEGEEVRLML 78
+++ + +CE E R++L
Sbjct: 115 VQKVLVGNKCEENERRVVL 133
>gi|148236958|ref|NP_001087273.1| RAB8B, member RAS oncogene family [Xenopus laevis]
gi|51873938|gb|AAH78493.1| MGC85265 protein [Xenopus laevis]
Length = 207
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 83/157 (52%), Gaps = 2/157 (1%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
D+F + + K E +G++++L +WDTAGQE F IT AYYRGA ++ +
Sbjct: 31 DAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDI 90
Query: 108 IDRDSFEAAHSWKMKV-ENECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
+ SF+ +W + E+ ++ +++ NK D+ D+ V+ E+ + L+ G + + T
Sbjct: 91 TNEKSFDNIKNWIRNIEEHASSDVERMILGNKCDMNDKRQVSREKGEKLAIDYGIKFLET 150
Query: 167 SVKEDINVNSIFRYLTTKCLSEL-RQQEEEYSINGNG 202
S K INV F L +++L R+ E S +G G
Sbjct: 151 SAKSSINVEEAFFTLGRDIMTKLNRKMNENISPSGGG 187
>gi|426374421|ref|XP_004054072.1| PREDICTED: uncharacterized protein LOC101141592 [Gorilla gorilla
gorilla]
Length = 459
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/126 (36%), Positives = 70/126 (55%), Gaps = 6/126 (4%)
Query: 64 RTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 123
RT+ E GE+V+L +WDTAGQE F IT YYRG ++ + +SF W ++
Sbjct: 306 RTV-EINGEKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEI 364
Query: 124 ENECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLTT 183
C ++ +LV NK D ++ VV E+A + +G +L TS KE++NV +F
Sbjct: 365 NQNCDDVCRILVGNKNDDPERKVVETEDAYKFAGQMGIQLFETSAKENVNVEEMF----- 419
Query: 184 KCLSEL 189
C++EL
Sbjct: 420 NCITEL 425
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 28/49 (57%)
Query: 8 GEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
GE+V+L +WDTAGQE F IT YYRG ++ + +SF W
Sbjct: 312 GEKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRW 360
>gi|217071342|gb|ACJ84031.1| unknown [Medicago truncatula]
Length = 202
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 75/146 (51%), Gaps = 1/146 (0%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
DS+ ++ + V K E +G+ ++L +WDTAGQE F IT +YYRGA ++ +
Sbjct: 31 DSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDV 90
Query: 108 IDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
D++SF W +++ E + +LV NK DL D+ VV+ E A + +G M T
Sbjct: 91 TDQESFNNVKQWLNEIDRYASENVNKLLVGNKSDLSDKKVVSSETAKAFADEIGIPFMET 150
Query: 167 SVKEDINVNSIFRYLTTKCLSELRQQ 192
S K NV F + + + + Q
Sbjct: 151 SAKNASNVEQAFMAMAAEIKNRMASQ 176
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 32/50 (64%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
+G+ ++L +WDTAGQE F IT +YYRGA ++ + D++SF W
Sbjct: 53 DGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQW 102
>gi|432889723|ref|XP_004075330.1| PREDICTED: ras-related protein Rab-30-like [Oryzias latipes]
Length = 203
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 95/188 (50%), Gaps = 10/188 (5%)
Query: 22 EEFDAITKAYYRG----AQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLM 77
E++D + K G + C++ T + F + V E +GE+V+L
Sbjct: 4 EDYDYLFKIVLIGNAGVGKTCLVRRFT--QGLFPPGQGATIGVDFMIKTVEIKGEKVKLQ 61
Query: 78 LWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENEC-GEIPTVLVQ 136
+WDTAGQE F +IT++YYR A A ++T+ DSF W ++E ++ T+LV
Sbjct: 62 IWDTAGQERFRSITQSYYRSANALILTYDITCEDSFRCLPEWLREIEQYANNQVVTILVG 121
Query: 137 NKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSELRQQEEEY 196
NKIDL+++ V + A+ + A + TS KE NV +F L + + E +Q + +
Sbjct: 122 NKIDLVEKREVLRQRAEDFAEAQSMLYLETSAKESDNVEKLFLDLACELIREAKQNKLD- 180
Query: 197 SINGNGLP 204
NG+ P
Sbjct: 181 --NGDTAP 186
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 34/50 (68%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
+GE+V+L +WDTAGQE F +IT++YYR A A ++T+ DSF W
Sbjct: 54 KGEKVKLQIWDTAGQERFRSITQSYYRSANALILTYDITCEDSFRCLPEW 103
>gi|388506692|gb|AFK41412.1| unknown [Medicago truncatula]
Length = 202
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 75/146 (51%), Gaps = 1/146 (0%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
DS+ ++ + V K E +G+ ++L +WDTAGQE F IT +YYRGA ++ +
Sbjct: 31 DSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDV 90
Query: 108 IDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
D++SF W +++ E + +LV NK DL D+ VV+ E A + +G M T
Sbjct: 91 TDQESFNNVKQWLNEIDRYASENVNKLLVGNKSDLSDKKVVSSETAKAFADEIGIPFMET 150
Query: 167 SVKEDINVNSIFRYLTTKCLSELRQQ 192
S K NV F + + + + Q
Sbjct: 151 SAKNASNVEQAFMAMAAEIKNRMASQ 176
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 32/50 (64%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
+G+ ++L +WDTAGQE F IT +YYRGA ++ + D++SF W
Sbjct: 53 DGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQW 102
>gi|66811592|ref|XP_639975.1| Rab GTPase [Dictyostelium discoideum AX4]
gi|74854016|sp|Q54NU2.1|RAB1D_DICDI RecName: Full=Ras-related protein Rab-1D
gi|60466912|gb|EAL64956.1| Rab GTPase [Dictyostelium discoideum AX4]
Length = 204
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 69/132 (52%), Gaps = 1/132 (0%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
DS+ H + V K +G+ ++L +WDTAGQE F IT +YYRGAQ ++ +
Sbjct: 33 DSWTDTHISTIGVDFKIKTLNLDGKTIKLQIWDTAGQERFRTITSSYYRGAQGIILVYDC 92
Query: 108 IDRDSFEAAHSWKMKVEN-ECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
D+DSF W +++ C + +LV NK DL+++ VV +A + + G + T
Sbjct: 93 TDQDSFTNVKQWMGEIDRYACENVNKLLVGNKTDLVNEKVVDSNQAKSFAESYGIPFIET 152
Query: 167 SVKEDINVNSIF 178
S K NV F
Sbjct: 153 SAKNATNVEECF 164
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 33/50 (66%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
+G+ ++L +WDTAGQE F IT +YYRGAQ ++ + D+DSF W
Sbjct: 55 DGKTIKLQIWDTAGQERFRTITSSYYRGAQGIILVYDCTDQDSFTNVKQW 104
>gi|328865966|gb|EGG14352.1| Rab GTPase [Dictyostelium fasciculatum]
Length = 200
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 87/170 (51%), Gaps = 3/170 (1%)
Query: 35 AQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAY 94
++C++ T + + A + + ++K + G+ V+L +WDTAGQE F +IT+ +
Sbjct: 20 GKSCILVRFTDNTFNTHFAPTLGVDFNVKTIRNKETGQTVKLQIWDTAGQERFRSITQTF 79
Query: 95 YRGAQACVITFSTIDRDSFEAAHSWKMKVE--NECGEIPTVLVQNKIDLLDQSVVAPEEA 152
YRG+ ++ + D SFE W + + G I VLV NKID+ Q V+ E+
Sbjct: 80 YRGSHGVILVYDITDVKSFERCRDWIADINQYTQNGMI-IVLVGNKIDMTAQRKVSFEQG 138
Query: 153 DLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSELRQQEEEYSINGNG 202
L+ L + TS KE++ V ++F ++ ++ E E +I G G
Sbjct: 139 KALAEELNIKFFETSAKENMGVTNVFDHIVQHIEQTMKDTEVEKTIIGTG 188
Score = 55.8 bits (133), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 31/49 (63%)
Query: 8 GEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
G+ V+L +WDTAGQE F +IT+ +YRG+ ++ + D SFE W
Sbjct: 56 GQTVKLQIWDTAGQERFRSITQTFYRGSHGVILVYDITDVKSFERCRDW 104
>gi|170592039|ref|XP_001900777.1| Ras-related protein Rab-35 [Brugia malayi]
gi|158591929|gb|EDP30532.1| Ras-related protein Rab-35, putative [Brugia malayi]
Length = 209
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 77/157 (49%), Gaps = 1/157 (0%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
++F + + V K G+ V+L +WDTAGQE F IT YYRG ++ +
Sbjct: 36 NTFSPNYITTIGVDFKIRTVTINGQRVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYEV 95
Query: 108 IDRDSFEAAHSWKMKVENECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTS 167
DSF W +++ C + VLV NK D ++ VV +A + + TS
Sbjct: 96 TSGDSFSNVKRWLHEIDTNCENVQKVLVGNKADDPERRVVLEVDARRFAETMKIPFFETS 155
Query: 168 VKEDINVNSIFRYLTTKCL-SELRQQEEEYSINGNGL 203
KE+INV +F +T L ++LR + + +G+G+
Sbjct: 156 AKENINVEEMFNCITRLVLEAKLRAPQTNIADSGSGV 192
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 27/49 (55%)
Query: 8 GEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
G+ V+L +WDTAGQE F IT YYRG ++ + DSF W
Sbjct: 59 GQRVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYEVTSGDSFSNVKRW 107
>gi|322802264|gb|EFZ22660.1| hypothetical protein SINV_03565 [Solenopsis invicta]
Length = 200
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 82/163 (50%), Gaps = 2/163 (1%)
Query: 34 GAQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKA 93
G I F D D+F + + K E G++++L +WDTAGQE F IT +
Sbjct: 19 GVGKTCILFRFSD-DAFSTTFISTIGIDFKIKTVELRGKKIKLQIWDTAGQERFHTITTS 77
Query: 94 YYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEA 152
YYRGA ++ + + +FE W ++ E + +++ NK D+ ++ VV+ E+
Sbjct: 78 YYRGAMGIMLVYDITNEKTFENIVKWLRNIDEHANEDVEKMILGNKSDMEERRVVSTEKG 137
Query: 153 DLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSELRQQEEE 195
+ ++R G R M TS K +IN++ F L L + +E +
Sbjct: 138 EAIAREHGIRFMETSAKANINIDRAFSELAEAILDKTHGKEPQ 180
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 7/80 (8%)
Query: 8 GEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVSIKRTIK 67
G++++L +WDTAGQE F IT +YYRGA ++ + + +FE W R I
Sbjct: 55 GKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKTFENIVKW------LRNID 108
Query: 68 ECEGEEV-RLMLWDTAGQEE 86
E E+V +++L + + EE
Sbjct: 109 EHANEDVEKMILGNKSDMEE 128
>gi|195383704|ref|XP_002050566.1| GJ20130 [Drosophila virilis]
gi|194145363|gb|EDW61759.1| GJ20130 [Drosophila virilis]
Length = 220
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 71/135 (52%), Gaps = 1/135 (0%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
DSF +A + + K + V+L +WDTAGQE + IT AYYRGA ++ +
Sbjct: 44 DSFTSAFVSTVGIDFKVKTVFRHDKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDV 103
Query: 108 IDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
+ DSF + W +++ + +LV NK D+ DQ V++ E L+ LG T
Sbjct: 104 TNEDSFNSVQDWVTQIKTYSWDNAQVILVGNKCDMEDQRVISFERGRQLADQLGVEFFET 163
Query: 167 SVKEDINVNSIFRYL 181
S KE++NV ++F L
Sbjct: 164 SAKENVNVKAVFERL 178
>gi|17737663|ref|NP_524172.1| Rab8, isoform A [Drosophila melanogaster]
gi|386771441|ref|NP_001246837.1| Rab8, isoform C [Drosophila melanogaster]
gi|194751943|ref|XP_001958283.1| GF10843 [Drosophila ananassae]
gi|194874419|ref|XP_001973397.1| GG13365 [Drosophila erecta]
gi|195354284|ref|XP_002043628.1| GM15893 [Drosophila sechellia]
gi|195496110|ref|XP_002095554.1| GE22459 [Drosophila yakuba]
gi|195591647|ref|XP_002085550.1| GD12244 [Drosophila simulans]
gi|2313045|dbj|BAA21711.1| rab8 [Drosophila melanogaster]
gi|7293732|gb|AAF49101.1| Rab8, isoform A [Drosophila melanogaster]
gi|17862678|gb|AAL39816.1| LD44762p [Drosophila melanogaster]
gi|40788410|dbj|BAD07038.1| Rab8 [Drosophila melanogaster]
gi|190625565|gb|EDV41089.1| GF10843 [Drosophila ananassae]
gi|190655180|gb|EDV52423.1| GG13365 [Drosophila erecta]
gi|194127796|gb|EDW49839.1| GM15893 [Drosophila sechellia]
gi|194181655|gb|EDW95266.1| GE22459 [Drosophila yakuba]
gi|194197559|gb|EDX11135.1| GD12244 [Drosophila simulans]
gi|220946338|gb|ACL85712.1| Rab8-PA [synthetic construct]
gi|220956084|gb|ACL90585.1| Rab8-PA [synthetic construct]
gi|383292017|gb|AFH04508.1| Rab8, isoform C [Drosophila melanogaster]
Length = 207
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 79/161 (49%), Gaps = 3/161 (1%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
D+F + + K E + ++++L +WDTAGQE F IT AYYRGA ++ +
Sbjct: 31 DAFNTTFISTIGIDFKIRTIELDNKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDI 90
Query: 108 IDRDSFEAAHSWKMKV-ENECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
SFE +W + EN ++ +L+ NK +L D+ V+ E + L+ G + M T
Sbjct: 91 TQEKSFENIKNWIRNIEENASADVEKMLLGNKCELTDKRQVSKERGEQLAIEYGIKFMET 150
Query: 167 SVKEDINVNSIFRYLTT--KCLSELRQQEEEYSINGNGLPP 205
S K INV F L + K +E R + G+ L P
Sbjct: 151 SAKASINVEEAFLTLASDIKAKTEKRMEANNPPKGGHQLKP 191
>gi|303748|dbj|BAA02115.1| GTP-binding protein [Pisum sativum]
gi|738939|prf||2001457G GTP-binding protein
Length = 201
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 79/164 (48%), Gaps = 7/164 (4%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
DS+ ++ + V K E EG+ V+L +WDTAGQE F IT +YYRGA +I +
Sbjct: 31 DSYVDSYISTIGVDFKIRTVELEGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDV 90
Query: 108 IDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
D +SF W +++ + + +LV NK DL + VV + A + LG + T
Sbjct: 91 TDMESFNNVKQWLHEIDRYANDSVCKLLVGNKCDLTENKVVQTQTAKAFADELGIPFLET 150
Query: 167 SVKEDINVNSIFRYLTTKCLSELRQQE------EEYSINGNGLP 204
S K+ INV F + + ++ Q E + G +P
Sbjct: 151 SAKDSINVEQAFLTMAAEIKKKMGSQPSGSKSAESVQMKGQPIP 194
Score = 60.1 bits (144), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 31/50 (62%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
EG+ V+L +WDTAGQE F IT +YYRGA +I + D +SF W
Sbjct: 53 EGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDMESFNNVKQW 102
>gi|402218850|gb|EJT98925.1| ras-domain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 208
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/119 (39%), Positives = 67/119 (56%), Gaps = 2/119 (1%)
Query: 64 RTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 123
RTI E +G+ ++L +WDTAGQE F IT AYYRGA ++ + D SF +W V
Sbjct: 49 RTI-ELDGKRIKLQIWDTAGQERFRTITVAYYRGAMGILLVYDVTDERSFNNIRTWFSNV 107
Query: 124 ENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYL 181
E E + +L+ NK D D+ V+ ++ L+ LG R + TS K++INV F L
Sbjct: 108 EQHASEGVNKILIGNKCDWDDKRAVSTQQGQELADELGVRFLETSAKQNINVEEAFFSL 166
>gi|392574050|gb|EIW67187.1| hypothetical protein TREMEDRAFT_40402 [Tremella mesenterica DSM
1558]
Length = 205
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/133 (37%), Positives = 71/133 (53%), Gaps = 3/133 (2%)
Query: 48 DSFEAAHSWKMKVSIK-RTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFS 106
D++ ++ + V K RTI E EG+ V+L +WDTAGQE F IT +YYRGA ++ +
Sbjct: 32 DTYTDSYISTIGVDFKIRTI-ELEGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIVVYD 90
Query: 107 TIDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMR 165
DRD+F W +++ E + +LV NK DL + VV EA + LG +
Sbjct: 91 VTDRDTFTNVKQWLQEIDRYAVEGVNKLLVGNKSDLTTKKVVEHNEAKSFADELGIPFLE 150
Query: 166 TSVKEDINVNSIF 178
TS K NV F
Sbjct: 151 TSAKNATNVEQAF 163
Score = 62.8 bits (151), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 32/50 (64%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
EG+ V+L +WDTAGQE F IT +YYRGA ++ + DRD+F W
Sbjct: 54 EGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDRDTFTNVKQW 103
>gi|300122444|emb|CBK23015.2| unnamed protein product [Blastocystis hominis]
Length = 155
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 71/123 (57%), Gaps = 5/123 (4%)
Query: 68 ECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENEC 127
E +G +VR +WDTAGQE F +T +YYRGA ++ + + SFE +W + EN C
Sbjct: 2 EVKGRKVRATIWDTAGQERFRTLTSSYYRGAHGIILVYDVTCQSSFENLQTWLSECENYC 61
Query: 128 G----EIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLTT 183
+I +LV NK+DL +++ V+ ++ ++ G + TS KE+I VN +F L T
Sbjct: 62 TDQAEDIIKLLVANKVDLPNRA-VSTQDGQNFAKQHGMLYIETSAKENIGVNQVFEELVT 120
Query: 184 KCL 186
K L
Sbjct: 121 KVL 123
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 31/50 (62%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
+G +VR +WDTAGQE F +T +YYRGA ++ + + SFE +W
Sbjct: 4 KGRKVRATIWDTAGQERFRTLTSSYYRGAHGIILVYDVTCQSSFENLQTW 53
>gi|147902880|ref|NP_001085176.1| RAB30, member RAS oncogene family [Xenopus laevis]
gi|47937791|gb|AAH72360.1| MGC83515 protein [Xenopus laevis]
Length = 203
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/143 (34%), Positives = 76/143 (53%), Gaps = 1/143 (0%)
Query: 50 FEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTID 109
F + V E +GE+++L +WDTAGQE F +IT++YYR A A ++T+
Sbjct: 34 FPPGQGATIGVDFMIKTVEIKGEKIKLQIWDTAGQERFRSITQSYYRSANALILTYDITC 93
Query: 110 RDSFEAAHSWKMKVEN-ECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSV 168
+SF W ++E E+ TVLV NKIDL ++ V+ + A+ + + TS
Sbjct: 94 EESFRCLPEWLREIEQYASSEVITVLVGNKIDLAERREVSQQRAEEFAGTQNMYYLETSA 153
Query: 169 KEDINVNSIFRYLTTKCLSELRQ 191
KE NV +F L + +SE RQ
Sbjct: 154 KESDNVEKLFLDLACRLISEARQ 176
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 34/50 (68%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
+GE+++L +WDTAGQE F +IT++YYR A A ++T+ +SF W
Sbjct: 54 KGEKIKLQIWDTAGQERFRSITQSYYRSANALILTYDITCEESFRCLPEW 103
>gi|28875789|ref|NP_789862.1| ras-related protein Rab-3C [Bos taurus]
gi|162764|gb|AAA30418.1| GTP-binding protein [Bos taurus]
Length = 218
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 71/135 (52%), Gaps = 2/135 (1%)
Query: 48 DSFEAAHSWKMKVSIK-RTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFS 106
DSF +A + + K +T+ + E + ++L +WDTAGQE + IT AYYRGA ++ +
Sbjct: 45 DSFTSAFVSTVGIDFKVKTVFKNE-KRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYD 103
Query: 107 TIDRDSFEAAHSWKMKVENECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
+ +SF A W + +LV NK D+ D+ V++ EE L LG T
Sbjct: 104 ITNEESFNAVQDWSLNQTYSWDNAQVILVGNKCDMEDERVISSEEGQHLGEHLGFEFFET 163
Query: 167 SVKEDINVNSIFRYL 181
S K++INV F L
Sbjct: 164 SAKDNINVKQTFERL 178
>gi|313220927|emb|CBY31762.1| unnamed protein product [Oikopleura dioica]
gi|313226508|emb|CBY21653.1| unnamed protein product [Oikopleura dioica]
Length = 216
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 77/149 (51%), Gaps = 1/149 (0%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
DS+ +A + + K + + V+L +WDTAGQE + IT AYYRGA ++ +
Sbjct: 42 DSYTSAFVSTVGIDFKVKTVQRNNKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDI 101
Query: 108 IDRDSFEAAHSWKMKVENECGEIPTV-LVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
+ DSF A W +++ + V LV NK D+ ++ VV+ E + L+R LG T
Sbjct: 102 TNEDSFNAVQDWATQIKTYSWDSAKVMLVANKADMENERVVSTERGEELARQLGFDFFET 161
Query: 167 SVKEDINVNSIFRYLTTKCLSELRQQEEE 195
S KE++NV F L ++ + EE
Sbjct: 162 SAKENLNVAQSFDRLVDVICDKMAESVEE 190
>gi|195066090|ref|XP_001996775.1| GH24197 [Drosophila grimshawi]
gi|193892005|gb|EDV90871.1| GH24197 [Drosophila grimshawi]
Length = 220
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 71/135 (52%), Gaps = 1/135 (0%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
DSF +A + + K + V+L +WDTAGQE + IT AYYRGA ++ +
Sbjct: 44 DSFTSAFVSTVGIDFKVKTVFRHDKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDV 103
Query: 108 IDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
+ DSF + W +++ + +LV NK D+ DQ V++ E L+ LG T
Sbjct: 104 TNEDSFNSVQDWVTQIKTYSWDNAQVILVGNKCDMEDQRVISFERGRQLADQLGVEFFET 163
Query: 167 SVKEDINVNSIFRYL 181
S KE++NV ++F L
Sbjct: 164 SAKENVNVKAVFERL 178
>gi|17737457|ref|NP_523687.1| Rab3 [Drosophila melanogaster]
gi|194884193|ref|XP_001976180.1| GG22724 [Drosophila erecta]
gi|195333207|ref|XP_002033283.1| GM20500 [Drosophila sechellia]
gi|195483658|ref|XP_002090378.1| GE13081 [Drosophila yakuba]
gi|131800|sp|P25228.1|RAB3_DROME RecName: Full=Ras-related protein Rab-3
gi|158193|gb|AAA28843.1| rab3 [Drosophila melanogaster]
gi|7303712|gb|AAF58762.1| Rab3 [Drosophila melanogaster]
gi|16648446|gb|AAL25488.1| LP05860p [Drosophila melanogaster]
gi|40788408|dbj|BAD07037.1| Rab3 [Drosophila melanogaster]
gi|190659367|gb|EDV56580.1| GG22724 [Drosophila erecta]
gi|194125253|gb|EDW47296.1| GM20500 [Drosophila sechellia]
gi|194176479|gb|EDW90090.1| GE13081 [Drosophila yakuba]
gi|220947366|gb|ACL86226.1| Rab3-PA [synthetic construct]
gi|220956828|gb|ACL90957.1| Rab3-PA [synthetic construct]
Length = 220
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 71/135 (52%), Gaps = 1/135 (0%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
DSF +A + + K + V+L +WDTAGQE + IT AYYRGA ++ +
Sbjct: 44 DSFTSAFVSTVGIDFKVKTVFRHDKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDV 103
Query: 108 IDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
+ DSF + W +++ + +LV NK D+ DQ V++ E L+ LG T
Sbjct: 104 TNEDSFNSVQDWVTQIKTYSWDNAQVILVGNKCDMEDQRVISFERGRQLADQLGVEFFET 163
Query: 167 SVKEDINVNSIFRYL 181
S KE++NV ++F L
Sbjct: 164 SAKENVNVKAVFERL 178
>gi|307167688|gb|EFN61191.1| Ras-related protein Rab-8A [Camponotus floridanus]
gi|332026766|gb|EGI66875.1| Ras-related protein Rab-8A [Acromyrmex echinatior]
Length = 209
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 82/162 (50%), Gaps = 5/162 (3%)
Query: 35 AQACVI-TFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKA 93
+ CV+ FS D+F + + K E +G++++L +WDTAGQE F IT A
Sbjct: 20 GKTCVLFRFS---EDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDTAGQERFRTITTA 76
Query: 94 YYRGAQACVITFSTIDRDSFEAAHSWKMKV-ENECGEIPTVLVQNKIDLLDQSVVAPEEA 152
YYRGA ++ + + SFE +W + EN ++ +L+ NK +L D+ V E
Sbjct: 77 YYRGAMGIMLVYDVTNDKSFENIKNWIRNIEENASADVEKMLLGNKCELTDKRQVTKERG 136
Query: 153 DLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSELRQQEE 194
+ L+ G + M TS K INV F L +++ ++ E
Sbjct: 137 EQLAVEYGIKFMETSAKSSINVEEAFYTLARDIKAKMEKKLE 178
>gi|325297096|ref|NP_001191556.1| Rab3 [Aplysia californica]
gi|392973|gb|AAA03315.1| Rab3 [Aplysia californica]
Length = 219
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/142 (36%), Positives = 72/142 (50%), Gaps = 15/142 (10%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
DSF +A + + K + + V+L +WDTAGQE + IT AYYRGA ++ +
Sbjct: 44 DSFTSAFVSTVGIDFKVKTVFRQDKRVKLQIWDTAGQERYPTITTAYYRGAMGFLLMYDI 103
Query: 108 IDRDSFEAAHSWKMKVENECGEIPT--------VLVQNKIDLLDQSVVAPEEADLLSRAL 159
+ +SF A W C +I T VLV NK DL D+ VV+ E L+ L
Sbjct: 104 TNEESFNAVQDW-------CTQIKTYSWDNAQVVLVGNKCDLEDERVVSTERGKQLADQL 156
Query: 160 GCRLMRTSVKEDINVNSIFRYL 181
G TS KE+INV ++F L
Sbjct: 157 GLEFFETSAKENINVKAVFERL 178
>gi|355714980|gb|AES05184.1| RAB8B, member RAS oncoprotein family [Mustela putorius furo]
Length = 166
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 80/142 (56%), Gaps = 2/142 (1%)
Query: 64 RTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 123
RTI E +G++++L +WDTAGQE F IT AYYRGA ++ + + SF+ +W +
Sbjct: 7 RTI-ELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNI 65
Query: 124 -ENECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLT 182
E+ ++ +++ NK D+ D+ V+ E + L+ G + + TS K NV F L
Sbjct: 66 EEHASSDVERMILGNKCDMNDKRQVSKERGEKLAIDYGIKFLETSAKSSTNVEEAFFTLA 125
Query: 183 TKCLSELRQQEEEYSINGNGLP 204
+++L ++ + + +G+G P
Sbjct: 126 RDIMTKLNRKMNDSNSSGSGGP 147
>gi|348510173|ref|XP_003442620.1| PREDICTED: ras-related protein Rab-35-like [Oreochromis niloticus]
Length = 209
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 74/147 (50%), Gaps = 3/147 (2%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
+SF ++ + V K + +GE V+L +WDTAGQE F IT YYR +I +
Sbjct: 32 NSFSGSYITTIGVDFKIRTVDIDGERVKLQIWDTAGQERFRTITSTYYRNTHGVIIVYDV 91
Query: 108 IDRDSFEAAHSWKMKVENECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTS 167
+ +SF W ++ C + +LV NK D + V ++A ++G R+ TS
Sbjct: 92 TNPESFVNVKRWLNEISQNCDNVCKILVGNKNDDPSKKQVDTQDALRFGESVGVRVFETS 151
Query: 168 VKEDINVNSIFRYLTTKCLSELRQQEE 194
KE+INV +F T L LR ++E
Sbjct: 152 AKENINVEEMFMAFT---LMVLRAKKE 175
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 31/55 (56%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVS 61
+GE V+L +WDTAGQE F IT YYR +I + + +SF W ++S
Sbjct: 54 DGERVKLQIWDTAGQERFRTITSTYYRNTHGVIIVYDVTNPESFVNVKRWLNEIS 108
>gi|1370166|emb|CAA98160.1| RAB1C [Lotus japonicus]
Length = 202
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 80/159 (50%), Gaps = 6/159 (3%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
DS+ ++ + V K E +G+ ++L +WDTAGQE F IT +YYRGA ++ +
Sbjct: 31 DSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDV 90
Query: 108 IDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
D++SF W +++ E + +LV NK DL + VV+ E A + +G M T
Sbjct: 91 TDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTENKVVSYETAKAFADEIGIPFMET 150
Query: 167 SVKEDINVNSIFRYLTTKCLSELRQQEEEYSINGNGLPP 205
S K NV F + +E++ + +N N PP
Sbjct: 151 SAKNATNVEQAFMAMA----AEIKNRMASQPVN-NARPP 184
>gi|402595111|gb|EJW89037.1| RAB protein [Wuchereria bancrofti]
Length = 209
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 76/157 (48%), Gaps = 1/157 (0%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
++F + + V K G+ V+L +WDTAGQE F IT YYRG ++ +
Sbjct: 36 NTFSPNYITTIGVDFKIRTVTINGQRVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYEV 95
Query: 108 IDRDSFEAAHSWKMKVENECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTS 167
DSF W +++ C + VLV NK D ++ VV +A + + TS
Sbjct: 96 TSGDSFSNVKRWLHEIDTNCENVQKVLVGNKADDPERRVVLEVDARRFAETMKIPFFETS 155
Query: 168 VKEDINVNSIFRYLTTKCL-SELRQQEEEYSINGNGL 203
KE+INV +F +T L ++LR + +G+G+
Sbjct: 156 AKENINVEEMFNCITRLVLEAKLRAPQTNIGDSGSGV 192
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 27/50 (54%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
G+ V+L +WDTAGQE F IT YYRG ++ + DSF W
Sbjct: 58 NGQRVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYEVTSGDSFSNVKRW 107
>gi|54606871|ref|NP_001006108.1| RAB30, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|49250515|gb|AAH74609.1| RAB30, member RAS oncogene family [Xenopus (Silurana) tropicalis]
Length = 203
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/144 (34%), Positives = 76/144 (52%), Gaps = 1/144 (0%)
Query: 50 FEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTID 109
F + V E +GE+++L +WDTAGQE F +IT++YYR A A ++T+
Sbjct: 34 FPPGQGATIGVDFMIKTVEIKGEKIKLQIWDTAGQERFRSITQSYYRSANALILTYDITC 93
Query: 110 RDSFEAAHSWKMKVENECG-EIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSV 168
+SF W ++E E+ TVLV NKIDL ++ V+ + A+ + + TS
Sbjct: 94 EESFRCLPEWLREIEQYANSEVITVLVGNKIDLAERREVSQQRAEEFAGTQNMYYLETSA 153
Query: 169 KEDINVNSIFRYLTTKCLSELRQQ 192
KE NV +F L + +SE RQ
Sbjct: 154 KESDNVEKLFLDLACRLISEARQN 177
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 34/50 (68%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
+GE+++L +WDTAGQE F +IT++YYR A A ++T+ +SF W
Sbjct: 54 KGEKIKLQIWDTAGQERFRSITQSYYRSANALILTYDITCEESFRCLPEW 103
>gi|74000847|ref|XP_853228.1| PREDICTED: ras-related protein Rab-8B [Canis lupus familiaris]
Length = 195
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 80/142 (56%), Gaps = 2/142 (1%)
Query: 64 RTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 123
RTI E +G++++L +WDTAGQE F IT AYYRGA ++ + + SF+ +W +
Sbjct: 36 RTI-ELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNI 94
Query: 124 -ENECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLT 182
E+ ++ +++ NK D+ D+ V+ E + L+ G + + TS K NV F L
Sbjct: 95 EEHASSDVERMILGNKCDMNDKRQVSKERGEKLAIDYGIKFLETSAKSSTNVEEAFFTLA 154
Query: 183 TKCLSELRQQEEEYSINGNGLP 204
+++L ++ + + +G+G P
Sbjct: 155 RDIMTKLNRKMNDSNSSGSGGP 176
>gi|327286070|ref|XP_003227754.1| PREDICTED: ras-related protein Rab-35-like [Anolis carolinensis]
Length = 185
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 75/159 (47%), Gaps = 7/159 (4%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
++F ++ + V K GE V+L +WDTAGQE F IT YYR +I +
Sbjct: 15 NTFSGSYITTIGVDFKIRTLVINGERVKLQIWDTAGQERFRTITSTYYRNTHGVIIVYDV 74
Query: 108 IDRDSFEAAHSWKMKVENECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTS 167
+ +SF W ++ C + +LV NK + + V +A S +G RL TS
Sbjct: 75 TNAESFVNVKRWLHEIGQNCDSVCKILVGNKCEDPSRKQVETADARRFSDQMGVRLFETS 134
Query: 168 VKEDINVNSIFRYLTTKC-------LSELRQQEEEYSIN 199
KE++NV +F +T L+ L+QQ E IN
Sbjct: 135 AKENLNVEEMFNAITAMVLRTKQENLARLQQQNEVVKIN 173
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 28/52 (53%)
Query: 5 ICEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
+ GE V+L +WDTAGQE F IT YYR +I + + +SF W
Sbjct: 35 VINGERVKLQIWDTAGQERFRTITSTYYRNTHGVIIVYDVTNAESFVNVKRW 86
>gi|195429579|ref|XP_002062835.1| GK19661 [Drosophila willistoni]
gi|194158920|gb|EDW73821.1| GK19661 [Drosophila willistoni]
Length = 220
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 71/135 (52%), Gaps = 1/135 (0%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
DSF +A + + K + V+L +WDTAGQE + IT AYYRGA ++ +
Sbjct: 44 DSFTSAFVSTVGIDFKVKTVFRHDKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDV 103
Query: 108 IDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
+ DSF + W +++ + +LV NK D+ DQ V++ E L+ LG T
Sbjct: 104 TNEDSFNSVQDWVTQIKTYSWDNAQVILVGNKCDMEDQRVISFERGRQLADQLGVEFFET 163
Query: 167 SVKEDINVNSIFRYL 181
S KE++NV ++F L
Sbjct: 164 SAKENVNVKAVFERL 178
>gi|195120790|ref|XP_002004904.1| GI20173 [Drosophila mojavensis]
gi|193909972|gb|EDW08839.1| GI20173 [Drosophila mojavensis]
Length = 220
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 70/135 (51%), Gaps = 1/135 (0%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
DSF +A + + K + V+L +WDTAGQE + IT AYYRGA ++ +
Sbjct: 44 DSFTSAFVSTVGIDFKVKTVFRHDKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDV 103
Query: 108 IDRDSFEAAHSWKMKVEN-ECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
+ DSF + W +++ +LV NK D+ DQ V++ E L+ LG T
Sbjct: 104 TNEDSFNSVQDWVTQIKTYSWDNAQVILVGNKCDMEDQRVISFERGRQLADQLGVEFFET 163
Query: 167 SVKEDINVNSIFRYL 181
S KE++NV ++F L
Sbjct: 164 SAKENVNVKAVFERL 178
>gi|159795493|pdb|2RHD|A Chain A, Crystal Structure Of Cryptosporidium Parvum Small Gtpase
Rab1a
Length = 175
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 70/133 (52%), Gaps = 1/133 (0%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
D++ ++ + V K E + V+L +WDTAGQE F IT +YYRGA +I +
Sbjct: 32 DTYTDSYISTIGVDFKIRTISLENKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDV 91
Query: 108 IDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
DRDSF+ W +++ E + +LV NK DL+ + VV +E L+ + G + + T
Sbjct: 92 TDRDSFDNVKQWIQEIDRYAMENVNKLLVGNKCDLVSKRVVTSDEGRELADSHGIKFIET 151
Query: 167 SVKEDINVNSIFR 179
S K NV F
Sbjct: 152 SAKNAYNVEQAFH 164
>gi|72136116|ref|XP_795833.1| PREDICTED: ras-related protein Rab-30-like [Strongylocentrotus
purpuratus]
gi|115689778|ref|XP_001199469.1| PREDICTED: ras-related protein Rab-30-like [Strongylocentrotus
purpuratus]
Length = 216
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/127 (37%), Positives = 71/127 (55%), Gaps = 1/127 (0%)
Query: 68 ECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENEC 127
E GE+V+L +WDTAGQE F +IT++YY A A V+ F ++SF A SW +VE
Sbjct: 50 EIGGEKVKLQIWDTAGQERFRSITQSYYHSADALVLVFDVTSKESFNALPSWLREVEQYA 109
Query: 128 G-EIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCL 186
++ +VLV NKIDL V E+ + + R + TS KE NV+ +F + +
Sbjct: 110 SPKVISVLVGNKIDLGKDREVNEEDGQSFADSHSMRFLETSAKESDNVDRLFLDIAVELT 169
Query: 187 SELRQQE 193
+ +R E
Sbjct: 170 NNVRNGE 176
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 36/53 (67%)
Query: 8 GEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 60
GE+V+L +WDTAGQE F +IT++YY A A V+ F ++SF A SW +V
Sbjct: 53 GEKVKLQIWDTAGQERFRSITQSYYHSADALVLVFDVTSKESFNALPSWLREV 105
>gi|308510398|ref|XP_003117382.1| CRE-RAB-21 protein [Caenorhabditis remanei]
gi|308242296|gb|EFO86248.1| CRE-RAB-21 protein [Caenorhabditis remanei]
Length = 210
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 88/163 (53%), Gaps = 10/163 (6%)
Query: 35 AQACVITFSTIDR---DSFEAAHSWKMKVSIKRT---IKECEGEEVRLMLWDTAGQEEFD 88
+ CV S + R + F + H ++ S + I +C+ E L +WDTAGQE++
Sbjct: 19 GEGCVGKSSLVLRFVENKFSSRHLSTIQASFQSKTVHIDDCKAE---LHIWDTAGQEKYH 75
Query: 89 AITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGEIPTVL-VQNKIDLLDQSVV 147
A+ YYRG+ ++ F DR SFE +W ++++ G+ +L V NKIDL D+ V
Sbjct: 76 ALGPIYYRGSNGVLLVFDITDRRSFEKVKNWVLEIKTCLGKTAEILIVGNKIDLEDERQV 135
Query: 148 APEEADLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSELR 190
+ ++A++ + G M TS +E++ ++ F LT+K + R
Sbjct: 136 SRQDAEVYAETEGALYMETSAQENMGISDAFEALTSKMIDHAR 178
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 38/66 (57%), Gaps = 6/66 (9%)
Query: 13 LMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGE 72
L +WDTAGQE++ A+ YYRG+ ++ F DR SFE +W ++ IK C G+
Sbjct: 63 LHIWDTAGQEKYHALGPIYYRGSNGVLLVFDITDRRSFEKVKNWVLE------IKTCLGK 116
Query: 73 EVRLML 78
+++
Sbjct: 117 TAEILI 122
>gi|213406139|ref|XP_002173841.1| GTP-binding protein ypt1 [Schizosaccharomyces japonicus yFS275]
gi|212001888|gb|EEB07548.1| GTP-binding protein ypt1 [Schizosaccharomyces japonicus yFS275]
Length = 204
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/132 (35%), Positives = 69/132 (52%), Gaps = 1/132 (0%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
D++ ++ + V K E EG+ V+L +WDTAGQE F IT +YYRGA +I +
Sbjct: 32 DTYTESYISTIGVDFKIRTIELEGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDV 91
Query: 108 IDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
D+DSF W +++ E + +LV NK D+ D+ VV A + LG + T
Sbjct: 92 TDQDSFNNVKQWLQEIDRFAVEGVNCLLVGNKCDITDKKVVEYTVAKEFADGLGIPFLET 151
Query: 167 SVKEDINVNSIF 178
S K+ NV F
Sbjct: 152 SAKDSTNVEQAF 163
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 32/50 (64%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
EG+ V+L +WDTAGQE F IT +YYRGA +I + D+DSF W
Sbjct: 54 EGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQDSFNNVKQW 103
>gi|443685362|gb|ELT88996.1| hypothetical protein CAPTEDRAFT_149846 [Capitella teleta]
Length = 218
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 73/135 (54%), Gaps = 1/135 (0%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
DSF +A + + K + + V+L +WDTAGQE + IT AYYRGA ++ +
Sbjct: 44 DSFTSAFVSTVGIDFKVKTVFRQDKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDV 103
Query: 108 IDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
+ +SF+A W +++ + VLV NK DL D+ VV+ + L+ LG T
Sbjct: 104 TNEESFQAVQDWCTQIKTYSWDNAQVVLVGNKCDLEDERVVSFDRGKQLAEQLGLEFFET 163
Query: 167 SVKEDINVNSIFRYL 181
S KE+INV ++F L
Sbjct: 164 SAKENINVKAVFERL 178
>gi|327285133|ref|XP_003227289.1| PREDICTED: ras-related protein Rab-2A-like [Anolis carolinensis]
Length = 234
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 75/145 (51%), Gaps = 3/145 (2%)
Query: 35 AQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAY 94
++C++ T R F ++H+ + V + ++++L +WDTAGQE F +I ++Y
Sbjct: 18 GKSCLLLQFTDKR--FLSSHNLTVGVEFGSRMITINDKKIKLQIWDTAGQESFRSIARSY 75
Query: 95 YRGAQACVITFSTIDRDSFEAAHSWKMKV-ENECGEIPTVLVQNKIDLLDQSVVAPEEAD 153
YRGA ++ + RD+F H+W +N I VLV NK DL DQ VV EE +
Sbjct: 76 YRGAAGALLVYDITKRDTFNHLHTWLEDARKNSSSHIVIVLVGNKSDLEDQRVVQREEGE 135
Query: 154 LLSRALGCRLMRTSVKEDINVNSIF 178
+R G + TS + NV F
Sbjct: 136 AFAREHGMVFLETSARTATNVEEAF 160
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 33/48 (68%)
Query: 9 EEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
++++L +WDTAGQE F +I ++YYRGA ++ + RD+F H+W
Sbjct: 53 KKIKLQIWDTAGQESFRSIARSYYRGAAGALLVYDITKRDTFNHLHTW 100
>gi|68065164|ref|XP_674566.1| GTPase [Plasmodium berghei strain ANKA]
gi|56493223|emb|CAH95602.1| GTPase, putative [Plasmodium berghei]
Length = 150
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/133 (37%), Positives = 73/133 (54%), Gaps = 4/133 (3%)
Query: 76 LMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGE-IPTVL 134
++ WDTAGQE F IT +YYRGAQ +I + DRDSF +W +++E E + +L
Sbjct: 9 IIQWDTAGQERFRTITSSYYRGAQGIIIVYDVTDRDSFNNVKNWIIEIEKYASEDVQKIL 68
Query: 135 VQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLT--TKCLSEL-RQ 191
+ NKIDL + V+ EE L+ + + + TS K NV F+ + K S+L Q
Sbjct: 69 IGNKIDLKNDRSVSYEEGKELAESCNIQFLETSAKISHNVEQAFKTMAYEIKNKSQLENQ 128
Query: 192 QEEEYSINGNGLP 204
Q+ +IN N P
Sbjct: 129 QKGRTNINLNAKP 141
Score = 59.7 bits (143), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 32/48 (66%)
Query: 13 LMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 60
++ WDTAGQE F IT +YYRGAQ +I + DRDSF +W +++
Sbjct: 9 IIQWDTAGQERFRTITSSYYRGAQGIIIVYDVTDRDSFNNVKNWIIEI 56
>gi|383864075|ref|XP_003707505.1| PREDICTED: ras-related protein Rab-8A-like isoform 2 [Megachile
rotundata]
Length = 210
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 83/164 (50%), Gaps = 3/164 (1%)
Query: 35 AQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAY 94
+ CV+ D+F + + K E +G++++L +WDTAGQE F IT AY
Sbjct: 20 GKTCVLF--RFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDTAGQERFRTITTAY 77
Query: 95 YRGAQACVITFSTIDRDSFEAAHSWKMKV-ENECGEIPTVLVQNKIDLLDQSVVAPEEAD 153
YRGA ++ + + SFE +W + EN ++ +L+ NK +L ++ V+ E +
Sbjct: 78 YRGAMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMLLGNKCELTEKRQVSKERGE 137
Query: 154 LLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSELRQQEEEYS 197
L+ G + M TS K INV F L +++ ++ +E S
Sbjct: 138 QLAVEYGIKFMETSAKSSINVEEAFYTLARDIKAKMEKKLKEAS 181
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 41/72 (56%), Gaps = 6/72 (8%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVSIKRTI 66
+G++++L +WDTAGQE F IT AYYRGA ++ + + SFE +W R I
Sbjct: 53 DGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDVTNEKSFENIKNW------IRNI 106
Query: 67 KECEGEEVRLML 78
+E +V ML
Sbjct: 107 EENASADVEKML 118
>gi|340726840|ref|XP_003401760.1| PREDICTED: ras-related protein Rab-8A-like isoform 2 [Bombus
terrestris]
gi|350421636|ref|XP_003492907.1| PREDICTED: ras-related protein Rab-8A-like isoform 2 [Bombus
impatiens]
Length = 210
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 83/164 (50%), Gaps = 3/164 (1%)
Query: 35 AQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAY 94
+ CV+ D+F + + K E +G++++L +WDTAGQE F IT AY
Sbjct: 20 GKTCVLF--RFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDTAGQERFRTITTAY 77
Query: 95 YRGAQACVITFSTIDRDSFEAAHSWKMKV-ENECGEIPTVLVQNKIDLLDQSVVAPEEAD 153
YRGA ++ + + SFE +W + EN ++ +L+ NK +L ++ V+ E +
Sbjct: 78 YRGAMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMLLGNKCELTEKRQVSKERGE 137
Query: 154 LLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSELRQQEEEYS 197
L+ G + M TS K INV F L +++ ++ +E S
Sbjct: 138 QLAVEYGIKFMETSAKSSINVEEAFYTLARDIKAKMEKKLKEAS 181
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 41/72 (56%), Gaps = 6/72 (8%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVSIKRTI 66
+G++++L +WDTAGQE F IT AYYRGA ++ + + SFE +W R I
Sbjct: 53 DGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDVTNEKSFENIKNW------IRNI 106
Query: 67 KECEGEEVRLML 78
+E +V ML
Sbjct: 107 EENASADVEKML 118
>gi|449019525|dbj|BAM82927.1| small GTP-binding protein of Rab family [Cyanidioschyzon merolae
strain 10D]
Length = 222
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/142 (37%), Positives = 75/142 (52%), Gaps = 4/142 (2%)
Query: 35 AQACVITFSTIDRDSFEAAHSWKMKVSI-KRTIKECEGEEVRLMLWDTAGQEEFDAITKA 93
++C++ T DR F+ H + V RT+ G+ V+L +WDTAGQE F +IT++
Sbjct: 20 GKSCLLLRFTDDR--FQVTHDLTIGVEFGTRTLTARNGQRVKLQIWDTAGQESFRSITRS 77
Query: 94 YYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGEIPT-VLVQNKIDLLDQSVVAPEEA 152
YYRG+ A ++ + R++F SW V T VLV NK DL DQ VA EE
Sbjct: 78 YYRGSAAALLVYDITRRETFLDVTSWLNDVRAYATRNTTVVLVGNKSDLEDQRQVAREEG 137
Query: 153 DLLSRALGCRLMRTSVKEDINV 174
+ +R G + TS K NV
Sbjct: 138 EAFARNHGLLFIETSAKTGSNV 159
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 34/49 (69%)
Query: 8 GEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
G+ V+L +WDTAGQE F +IT++YYRG+ A ++ + R++F SW
Sbjct: 55 GQRVKLQIWDTAGQESFRSITRSYYRGSAAALLVYDITRRETFLDVTSW 103
>gi|386771439|ref|NP_001246836.1| Rab8, isoform B [Drosophila melanogaster]
gi|383292016|gb|AFH04507.1| Rab8, isoform B [Drosophila melanogaster]
Length = 172
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/145 (35%), Positives = 76/145 (52%), Gaps = 4/145 (2%)
Query: 64 RTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 123
RTI E + ++++L +WDTAGQE F IT AYYRGA ++ + SFE +W +
Sbjct: 13 RTI-ELDNKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITQEKSFENIKNWIRNI 71
Query: 124 -ENECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLT 182
EN ++ +L+ NK +L D+ V+ E + L+ G + M TS K INV F L
Sbjct: 72 EENASADVEKMLLGNKCELTDKRQVSKERGEQLAIEYGIKFMETSAKASINVEEAFLTLA 131
Query: 183 T--KCLSELRQQEEEYSINGNGLPP 205
+ K +E R + G+ L P
Sbjct: 132 SDIKAKTEKRMEANNPPKGGHQLKP 156
>gi|322801510|gb|EFZ22171.1| hypothetical protein SINV_12925 [Solenopsis invicta]
Length = 177
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/136 (36%), Positives = 73/136 (53%), Gaps = 3/136 (2%)
Query: 48 DSFEAAHSWKMKVSIK-RTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFS 106
D+F + + K RTI E +G++++L +WDTAGQE F IT AYYRGA ++ +
Sbjct: 31 DAFNTTFISTIGIDFKIRTI-ELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYD 89
Query: 107 TIDRDSFEAAHSWKMKV-ENECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMR 165
+ SFE +W + EN ++ +L+ NK +L D+ V E + L+ G + M
Sbjct: 90 VTNDKSFENIKNWIRNIEENASADVEKMLLGNKCELTDKRQVTKERGEQLAVEYGIKFME 149
Query: 166 TSVKEDINVNSIFRYL 181
TS K INV F L
Sbjct: 150 TSAKSSINVEEAFYTL 165
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 41/73 (56%), Gaps = 6/73 (8%)
Query: 6 CEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVSIKRT 65
+G++++L +WDTAGQE F IT AYYRGA ++ + + SFE +W R
Sbjct: 52 LDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDVTNDKSFENIKNW------IRN 105
Query: 66 IKECEGEEVRLML 78
I+E +V ML
Sbjct: 106 IEENASADVEKML 118
>gi|125811091|ref|XP_001361745.1| GA20450 [Drosophila pseudoobscura pseudoobscura]
gi|194758000|ref|XP_001961250.1| GF11093 [Drosophila ananassae]
gi|195153505|ref|XP_002017666.1| GL17187 [Drosophila persimilis]
gi|54636921|gb|EAL26324.1| GA20450 [Drosophila pseudoobscura pseudoobscura]
gi|190622548|gb|EDV38072.1| GF11093 [Drosophila ananassae]
gi|194113462|gb|EDW35505.1| GL17187 [Drosophila persimilis]
Length = 220
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 71/135 (52%), Gaps = 1/135 (0%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
DSF +A + + K + V+L +WDTAGQE + IT AYYRGA ++ +
Sbjct: 44 DSFTSAFVSTVGIDFKVKTVFRHDKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDV 103
Query: 108 IDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
+ DSF + W +++ + +LV NK D+ DQ V++ E L+ LG T
Sbjct: 104 TNEDSFNSVQDWVTQIKTYSWDNAQVILVGNKCDMEDQRVISFERGRQLADQLGVEFFET 163
Query: 167 SVKEDINVNSIFRYL 181
S KE++NV ++F L
Sbjct: 164 SAKENVNVKAVFERL 178
>gi|326926485|ref|XP_003209430.1| PREDICTED: ras-related protein Rab-8B-like [Meleagris gallopavo]
Length = 225
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 81/142 (57%), Gaps = 2/142 (1%)
Query: 64 RTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 123
RTI E +G++++L +WDTAGQE F IT AYYRGA ++ + + SF+ +W +
Sbjct: 66 RTI-ELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNI 124
Query: 124 -ENECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLT 182
E+ ++ +++ NK D+ ++ V+ E+ + L+ G + + TS K INV F L
Sbjct: 125 EEHASSDVERMILGNKCDMNEKRQVSKEKGEKLAIDYGIKFLETSAKSSINVEEAFFTLA 184
Query: 183 TKCLSELRQQEEEYSINGNGLP 204
+++L ++ + S +G G P
Sbjct: 185 RDIMTKLNRKMNDSSSSGAGGP 206
>gi|397626807|gb|EJK68249.1| hypothetical protein THAOC_10589 [Thalassiosira oceanica]
Length = 231
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 74/146 (50%), Gaps = 1/146 (0%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
D++ ++ + V K E +G+ ++L +WDTAGQE F IT +YYRGA ++ +
Sbjct: 60 DTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDV 119
Query: 108 IDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
D +SF W +++ E + +LV NK DL + VV E+ + LG + T
Sbjct: 120 TDNESFNNVKQWLHEIDRYAAENVNKLLVGNKCDLEGKRVVTTEQGKEFADGLGIEFLET 179
Query: 167 SVKEDINVNSIFRYLTTKCLSELRQQ 192
S K NV F + ++ + ++ Q
Sbjct: 180 SAKTSTNVEQAFLTMASQIKARMKNQ 205
>gi|410730349|ref|XP_003671354.2| hypothetical protein NDAI_0G03340 [Naumovozyma dairenensis CBS 421]
gi|401780172|emb|CCD26111.2| hypothetical protein NDAI_0G03340 [Naumovozyma dairenensis CBS 421]
Length = 207
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 84/169 (49%), Gaps = 8/169 (4%)
Query: 18 TAGQEEFDAITKAYYRG----AQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEE 73
+A + +D+I K G ++C++ D F + + + K + G++
Sbjct: 4 SANGKGYDSIMKILLIGDSGVGKSCLLV--RFVEDKFNPSFITTIGIDFKIKTVDINGKK 61
Query: 74 VRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV-ENECGEIPT 132
V+L LWDTAGQE F IT AYYRGA ++ + D +F W V E+ E
Sbjct: 62 VKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFSNIKQWFKTVNEHANDEAQL 121
Query: 133 VLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYL 181
+LV NK D +D VV E+ + L++ LG + +S K D NVN IF L
Sbjct: 122 LLVGNKSD-MDTRVVTYEQGESLAKELGLPFVESSAKNDDNVNEIFFTL 169
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 46/92 (50%), Gaps = 8/92 (8%)
Query: 6 CEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVSIKRT 65
G++V+L LWDTAGQE F IT AYYRGA ++ + D +F W +T
Sbjct: 57 INGKKVKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFSNIKQW------FKT 110
Query: 66 IKECEGEEVRLMLWDTAGQEEFDAITKAYYRG 97
+ E +E +L+L + + D Y +G
Sbjct: 111 VNEHANDEAQLLL--VGNKSDMDTRVVTYEQG 140
>gi|50540426|ref|NP_001002679.1| ras-related protein Rab-3B [Danio rerio]
gi|49899208|gb|AAH75784.1| Zgc:86892 [Danio rerio]
Length = 220
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 80/156 (51%), Gaps = 6/156 (3%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
DSF +A + + K + ++L +WDTAGQE + IT AYYRGA ++ F
Sbjct: 47 DSFTSAFVSTVGIDFKVKTVFRNNKRIKLQIWDTAGQERYRTITTAYYRGAMGFLLMFDI 106
Query: 108 IDRDSFEAAHSWKMKVENEC-GEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
+RDSF A W +++ +LV NK DL D+ ++ E++ L+ LG +
Sbjct: 107 TNRDSFNAVRDWATQIKTYSWDNAQVILVGNKCDLEDERLIPTEDSQRLAHELGFQFFEA 166
Query: 167 SVKEDINVNSIFRYLTTKCLSELRQQEEEYSINGNG 202
S K+ INV +F +CL ++ + S++G+
Sbjct: 167 SAKDSINVKQVF-----ECLVDVICDKMTESLDGDA 197
>gi|363755488|ref|XP_003647959.1| hypothetical protein Ecym_7305 [Eremothecium cymbalariae
DBVPG#7215]
gi|356891995|gb|AET41142.1| hypothetical protein Ecym_7305 [Eremothecium cymbalariae
DBVPG#7215]
Length = 213
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 83/169 (49%), Gaps = 8/169 (4%)
Query: 18 TAGQEEFDAITKAYYRG----AQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEE 73
T G + +D+I K G ++C++ D F + + + K + +G++
Sbjct: 11 TPGGKGYDSIMKVLLVGDSGVGKSCLLV--RFVEDKFSPSFITTIGIDFKIKTVDIDGKK 68
Query: 74 VRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGEIPTV 133
++L LWDTAGQE F IT AYYRGA ++ + D +FE W V E +
Sbjct: 69 IKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFENIRQWFSTVNQHATEDAQI 128
Query: 134 -LVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYL 181
LV NK D +D V E+ + L++ LG + S K+D NV+ IF L
Sbjct: 129 LLVGNKKD-MDTRAVTYEQGESLAKELGVPFIEASAKDDENVSDIFFTL 176
>gi|356563370|ref|XP_003549937.1| PREDICTED: GTP-binding protein YPTM2-like isoform 1 [Glycine max]
Length = 202
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 79/159 (49%), Gaps = 6/159 (3%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
DS+ ++ + V K E +G+ ++L +WDTAGQE F IT +YYRGA ++ +
Sbjct: 31 DSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDV 90
Query: 108 IDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
D++SF W +++ E + +LV NK DL VV+ E A + +G M T
Sbjct: 91 TDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSSETAKAFADEIGIPFMET 150
Query: 167 SVKEDINVNSIFRYLTTKCLSELRQQEEEYSINGNGLPP 205
S K NV F + +E++ + +N N PP
Sbjct: 151 SAKNATNVEQAFMAMA----AEIKNRMASQPVN-NARPP 184
>gi|66475702|ref|XP_627667.1| RAS small GTpases RIC1/ypt1 [Cryptosporidium parvum Iowa II]
gi|67619548|ref|XP_667653.1| small GTP binding protein rab1a [Cryptosporidium hominis TU502]
gi|32398899|emb|CAD98364.1| small GTP binding protein rab1a, probable [Cryptosporidium parvum]
gi|46229098|gb|EAK89947.1| RAS small GTpases RIC1/ypt1 [Cryptosporidium parvum Iowa II]
gi|54658806|gb|EAL37422.1| small GTP binding protein rab1a [Cryptosporidium hominis]
Length = 203
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 71/135 (52%), Gaps = 1/135 (0%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
D++ ++ + V K E + V+L +WDTAGQE F IT +YYRGA +I +
Sbjct: 31 DTYTDSYISTIGVDFKIRTISLENKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDV 90
Query: 108 IDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
DRDSF+ W +++ E + +LV NK DL+ + VV +E L+ + G + + T
Sbjct: 91 TDRDSFDNVKQWIQEIDRYAMENVNKLLVGNKCDLVSKRVVTSDEGRELADSHGIKFIET 150
Query: 167 SVKEDINVNSIFRYL 181
S K NV F +
Sbjct: 151 SAKNAYNVEQAFHTM 165
>gi|300798495|ref|NP_001178304.1| ras-related protein Rab-3D [Bos taurus]
gi|426229005|ref|XP_004008584.1| PREDICTED: ras-related protein Rab-3D [Ovis aries]
gi|296485855|tpg|DAA27970.1| TPA: RAB3D, member RAS oncogene family-like [Bos taurus]
Length = 219
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 77/160 (48%), Gaps = 2/160 (1%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
DSF A + + K + ++L +WDTAGQE + IT AYYRGA ++ +
Sbjct: 45 DSFTPAFVSTVGIDFKVKTVYRHDKRIKLQIWDTAGQERYRTITTAYYRGAMGFLLMYDV 104
Query: 108 IDRDSFEAAHSWKMKVENEC-GEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
+++SF A W +++ +LV NK DL D+ VV EE L+ LG
Sbjct: 105 ANQESFAAVQDWATQIKTYSWDNAQVILVGNKCDLEDERVVPTEEGRRLADDLGFEFFEA 164
Query: 167 SVKEDINVNSIFRYLTTKCLSELRQQEEEYSING-NGLPP 205
S KE+INV +F L ++ + E S G NG P
Sbjct: 165 SAKENINVKQVFERLVDVICEKMNESLEPSSSPGSNGKGP 204
>gi|302666103|ref|XP_003024654.1| hypothetical protein TRV_01171 [Trichophyton verrucosum HKI 0517]
gi|291188720|gb|EFE44043.1| hypothetical protein TRV_01171 [Trichophyton verrucosum HKI 0517]
Length = 1174
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/152 (32%), Positives = 75/152 (49%), Gaps = 4/152 (2%)
Query: 34 GAQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKA 93
G C++ FS DSF + + + K +G+ V+L +WDTAGQE F IT A
Sbjct: 990 GKSCCLLRFS---EDSFTPSFITTIGIDFKIRTINLDGKRVKLQIWDTAGQERFRTITTA 1046
Query: 94 YYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEA 152
YYR A ++ + D SF+ +W VE E + +L+ NK D ++ V E+
Sbjct: 1047 YYRNAMGILLVYDVTDERSFKNIRTWFSNVEQHASEGVHKILIGNKCDGEEKRAVTVEQG 1106
Query: 153 DLLSRALGCRLMRTSVKEDINVNSIFRYLTTK 184
L+ LG + S K +INV+ F L T+
Sbjct: 1107 QQLANELGIPFLEVSAKNNINVDKAFYSLATE 1138
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 42/77 (54%), Gaps = 8/77 (10%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV------ 60
+G+ V+L +WDTAGQE F IT AYYR A ++ + D SF+ +W V
Sbjct: 1023 DGKRVKLQIWDTAGQERFRTITTAYYRNAMGILLVYDVTDERSFKNIRTWFSNVEQHASE 1082
Query: 61 SIKRTI--KECEGEEVR 75
+ + + +C+GEE R
Sbjct: 1083 GVHKILIGNKCDGEEKR 1099
>gi|440910159|gb|ELR59985.1| Ras-related protein Rab-3D, partial [Bos grunniens mutus]
Length = 222
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 77/160 (48%), Gaps = 2/160 (1%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
DSF A + + K + ++L +WDTAGQE + IT AYYRGA ++ +
Sbjct: 48 DSFTPAFVSTVGIDFKVKTVYRHDKRIKLQIWDTAGQERYRTITTAYYRGAMGFLLMYDV 107
Query: 108 IDRDSFEAAHSWKMKVENEC-GEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
+++SF A W +++ +LV NK DL D+ VV EE L+ LG
Sbjct: 108 ANQESFAAVQDWATQIKTYSWDNAQVILVGNKCDLEDERVVPTEEGRRLADDLGFEFFEA 167
Query: 167 SVKEDINVNSIFRYLTTKCLSELRQQEEEYSING-NGLPP 205
S KE+INV +F L ++ + E S G NG P
Sbjct: 168 SAKENINVKQVFERLVDVICEKMNESLEPSSSPGSNGKGP 207
>gi|308081088|ref|NP_001183566.1| uncharacterized protein LOC100502159 [Zea mays]
gi|194700886|gb|ACF84527.1| unknown [Zea mays]
gi|238013122|gb|ACR37596.1| unknown [Zea mays]
gi|413923310|gb|AFW63242.1| hypothetical protein ZEAMMB73_436511 [Zea mays]
gi|413938043|gb|AFW72594.1| hypothetical protein ZEAMMB73_730860 [Zea mays]
Length = 203
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 72/146 (49%), Gaps = 1/146 (0%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
DS+ ++ + V K E +G+ ++L +WDTAGQE F IT +YYRGA +I +
Sbjct: 31 DSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDV 90
Query: 108 IDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
D++SF W +++ + + +LV NK DL VVA E A + +G M T
Sbjct: 91 TDQESFNNVKQWLNEIDRYASDNVNKLLVGNKSDLTANKVVATETAKAFADEMGIPFMET 150
Query: 167 SVKEDINVNSIFRYLTTKCLSELRQQ 192
S K INV F + + Q
Sbjct: 151 SAKNAINVEQAFMAMAASIKDRMASQ 176
Score = 59.3 bits (142), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 32/50 (64%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
+G+ ++L +WDTAGQE F IT +YYRGA +I + D++SF W
Sbjct: 53 DGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQW 102
>gi|206539|gb|AAA41996.1| RAB16 [Rattus norvegicus]
Length = 198
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 78/160 (48%), Gaps = 2/160 (1%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
DSF A + + K + ++L +WDTAGQE + IT AYYRGA ++ +
Sbjct: 24 DSFTPAFVSTVGIDFKVKTVYRHDKRIKLQIWDTAGQERYRTITTAYYRGAMGFLLMYDI 83
Query: 108 IDRDSFEAAHSWKMKVENEC-GEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
+++SF A W +++ +LV NK DL D+ VV+ E+ L+ LG
Sbjct: 84 ANQESFTAVQDWATQIKTYSWDNAQVILVGNKCDLEDERVVSAEDGQRLAGDLGFEFFEA 143
Query: 167 SVKEDINVNSIFRYLTTKCLSELRQQEEEYSING-NGLPP 205
S KE+INV +F L ++ + E S G NG P
Sbjct: 144 SAKENINVKQVFERLVDIICDKMNESLEPSSSPGSNGKGP 183
>gi|340369097|ref|XP_003383085.1| PREDICTED: ras-related protein Rab-7L1-like [Amphimedon
queenslandica]
Length = 206
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/102 (44%), Positives = 61/102 (59%), Gaps = 5/102 (4%)
Query: 64 RTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKM-- 121
+++K E E +RL LWD AGQE F +I + Y+RGA CV+ F + SFE+A WK
Sbjct: 45 KSVKWSETETIRLHLWDIAGQERFHSIARTYFRGASGCVVMFDVTNNKSFESAREWKQEL 104
Query: 122 --KVENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALG 160
KVE GE +P VL+ NK DL+D+ VV + D +R G
Sbjct: 105 DSKVELPNGEKVPCVLLGNKDDLVDKKVVTQSQVDKFARENG 146
Score = 65.9 bits (159), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVSIKRTI 66
E E +RL LWD AGQE F +I + Y+RGA CV+ F + SFE+A WK ++ K +
Sbjct: 51 ETETIRLHLWDIAGQERFHSIARTYFRGASGCVVMFDVTNNKSFESAREWKQELDSKVEL 110
Query: 67 KECEGEEVRLML 78
GE+V +L
Sbjct: 111 P--NGEKVPCVL 120
>gi|311248642|ref|XP_003123225.1| PREDICTED: ras-related protein Rab-3D-like [Sus scrofa]
Length = 219
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 77/160 (48%), Gaps = 2/160 (1%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
DSF A + + K + ++L +WDTAGQE + IT AYYRGA ++ +
Sbjct: 45 DSFTPAFVSTVGIDFKVKTVYRHDKRIKLQIWDTAGQERYRTITTAYYRGAMGFLLMYDI 104
Query: 108 IDRDSFEAAHSWKMKVENEC-GEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
+++SF A W +++ +LV NK DL D+ VV EE L+ LG
Sbjct: 105 ANQESFAAVQDWSTQIKTYSWDNAQVILVGNKCDLEDERVVPTEEGRRLADDLGFEFFEA 164
Query: 167 SVKEDINVNSIFRYLTTKCLSELRQQEEEYSING-NGLPP 205
S KE+INV +F L ++ + E S G NG P
Sbjct: 165 SAKENINVKQVFERLVDIICEKMNESLEPSSSPGSNGKGP 204
>gi|383854082|ref|XP_003702551.1| PREDICTED: ras-related protein Rab-3-like [Megachile rotundata]
Length = 264
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 83/167 (49%), Gaps = 5/167 (2%)
Query: 19 AGQEEFDAITKAYYRGAQACVIT---FSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVR 75
A + FD + K G + T F D DSF +A + + K + V+
Sbjct: 54 AADQNFDYMFKLLIIGNSSVGKTSFLFRYAD-DSFTSAFVSTVGIDFKVKTVFRHDKRVK 112
Query: 76 LMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVEN-ECGEIPTVL 134
L +WDTAGQE + IT AYYRGA ++ + + +SF + W +++ C +L
Sbjct: 113 LQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNSVQDWVTQIKTYSCDNAQVIL 172
Query: 135 VQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYL 181
V NK D+ ++ V++ E L+ LG + TS KE+IN+ ++F L
Sbjct: 173 VGNKCDMDEERVISFERGKQLADQLGVQFFETSAKENINIKTVFEQL 219
>gi|367007798|ref|XP_003688628.1| hypothetical protein TPHA_0P00360 [Tetrapisispora phaffii CBS 4417]
gi|357526938|emb|CCE66194.1| hypothetical protein TPHA_0P00360 [Tetrapisispora phaffii CBS 4417]
Length = 214
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 81/165 (49%), Gaps = 8/165 (4%)
Query: 22 EEFDAITKAYYRG----AQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLM 77
+ +D+I K G ++C++ +D D F + + + K E G +++L
Sbjct: 14 KNYDSIMKILLIGDSGVGKSCLLV-RFVD-DKFNPSFITTIGIDFKIKTVEINGRKIKLQ 71
Query: 78 LWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW-KMKVENECGEIPTVLVQ 136
LWDTAGQE F IT AYYRGA ++ + D +F W K E+ + +LV
Sbjct: 72 LWDTAGQERFRTITTAYYRGAMGIILVYDVTDEKTFANIRQWFKTVTEHANDDAQLLLVG 131
Query: 137 NKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYL 181
NK D ++ V E+ D LSR LG + S K D NVN IF L
Sbjct: 132 NKSD-METRTVTHEQGDELSRELGIPFVEASAKNDDNVNEIFFTL 175
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 39/72 (54%), Gaps = 6/72 (8%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVSIKRTI 66
G +++L LWDTAGQE F IT AYYRGA ++ + D +F W +T+
Sbjct: 64 NGRKIKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDEKTFANIRQW------FKTV 117
Query: 67 KECEGEEVRLML 78
E ++ +L+L
Sbjct: 118 TEHANDDAQLLL 129
>gi|320169952|gb|EFW46851.1| Rab8a protein [Capsaspora owczarzaki ATCC 30864]
Length = 214
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 79/159 (49%), Gaps = 3/159 (1%)
Query: 48 DSFEAAHSWKMKVSIK-RTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFS 106
D+F A + + K RTI E +G++++L +WDTAGQE F IT AYYRGA ++ +
Sbjct: 31 DAFNATFISTIGIDFKIRTI-ELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYD 89
Query: 107 TIDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMR 165
+FE +W +E E + +++ NK D+ D+ VV E + L+R R
Sbjct: 90 VTQDKTFENIKNWIRNIEQHASEDVEKMILGNKCDVDDKRVVTKERGEQLAREYNVRFFE 149
Query: 166 TSVKEDINVNSIFRYLTTKCLSELRQQEEEYSINGNGLP 204
TS K +INV F + ++ + + G P
Sbjct: 150 TSAKANINVEEAFLTIARDIKKKIDSKAPGGAPKAGGAP 188
>gi|123400805|ref|XP_001301733.1| Ras family protein [Trichomonas vaginalis G3]
gi|121882952|gb|EAX88803.1| Ras family protein [Trichomonas vaginalis G3]
Length = 220
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 71/125 (56%), Gaps = 4/125 (3%)
Query: 71 GEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGEI 130
E + LM+WDT G+E + + Y A VI +S +D+ SF+A +W V+ G I
Sbjct: 57 AETIDLMIWDTPGRECLHLLAEDAYVNANIAVIFYSAVDKASFDAIPTWVDAVKKVTGPI 116
Query: 131 PTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLT----TKCL 186
VLV+NK+DL D+ + P EA +S+ L R SVKE++N+ ++F +L +K +
Sbjct: 117 QFVLVENKVDLTDKYAIDPAEAQTMSKRFDAPLFRISVKENLNLKALFTHLASILQSKYM 176
Query: 187 SELRQ 191
+ L Q
Sbjct: 177 TSLNQ 181
Score = 41.6 bits (96), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 28/49 (57%)
Query: 8 GEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
E + LM+WDT G+E + + Y A VI +S +D+ SF+A +W
Sbjct: 57 AETIDLMIWDTPGRECLHLLAEDAYVNANIAVIFYSAVDKASFDAIPTW 105
>gi|157167495|ref|XP_001654824.1| ras-related protein Rab-10, putative [Aedes aegypti]
gi|157167497|ref|XP_001654825.1| ras-related protein Rab-10, putative [Aedes aegypti]
gi|108882449|gb|EAT46674.1| AAEL002155-PA [Aedes aegypti]
gi|403182468|gb|EJY57406.1| AAEL002155-PB [Aedes aegypti]
Length = 204
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 80/161 (49%), Gaps = 2/161 (1%)
Query: 34 GAQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKA 93
G I F D D+F + + + K E G++++L +WDTAGQE F IT +
Sbjct: 19 GVGKTCILFRFSD-DAFTSTFISTIGIDFKIKTIELRGKKIKLQIWDTAGQERFHTITTS 77
Query: 94 YYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEA 152
YYRGA ++ + + SF+ W ++ E + +++ NK D+ D+ VV+ E
Sbjct: 78 YYRGAMGIMLVYDITNEKSFDNIVKWLRNIDEHANEDVEKMILGNKCDMTDKRVVSIERG 137
Query: 153 DLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSELRQQE 193
+ ++R R M TS K +IN+ FR L L + +E
Sbjct: 138 ESIAREHDIRFMETSAKANINIERAFRELAEAILDKTSGKE 178
>gi|449281960|gb|EMC88901.1| Ras-related protein Rab-8A, partial [Columba livia]
Length = 166
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 77/138 (55%), Gaps = 2/138 (1%)
Query: 64 RTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 123
RTI E +G+ ++L +WDTAGQE F IT AYYRGA ++ + + SFE +W +
Sbjct: 7 RTI-ELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFENIRNWVRNI 65
Query: 124 ENECG-EIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLT 182
E ++ +++ NK D D+ V+ E+ + L+ + G + M TS K +IN+ + F L
Sbjct: 66 EEHASPDVEKMILGNKCDANDKRQVSREQGEKLAASFGIKFMETSAKANINIENAFFTLA 125
Query: 183 TKCLSELRQQEEEYSING 200
+++ ++ E S G
Sbjct: 126 RDIKAKMDKKLEGNSPQG 143
>gi|291402892|ref|XP_002718230.1| PREDICTED: RAB8B, member RAS oncogene family [Oryctolagus
cuniculus]
gi|354474332|ref|XP_003499385.1| PREDICTED: ras-related protein Rab-8B-like [Cricetulus griseus]
gi|410961066|ref|XP_003987106.1| PREDICTED: ras-related protein Rab-8B isoform 1 [Felis catus]
gi|344251051|gb|EGW07155.1| Ras-related protein Rab-8B [Cricetulus griseus]
gi|351698401|gb|EHB01320.1| Ras-related protein Rab-8B [Heterocephalus glaber]
gi|431895937|gb|ELK05355.1| Ras-related protein Rab-8B [Pteropus alecto]
Length = 207
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 85/159 (53%), Gaps = 3/159 (1%)
Query: 48 DSFEAAHSWKMKVSIK-RTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFS 106
D+F + + K RTI E +G++++L +WDTAGQE F IT AYYRGA ++ +
Sbjct: 31 DAFNTTFISTIGIDFKIRTI-ELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYD 89
Query: 107 TIDRDSFEAAHSWKMKV-ENECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMR 165
+ SF+ +W + E+ ++ +++ NK D+ D+ V+ E + L+ G + +
Sbjct: 90 ITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCDMNDKRQVSKERGEKLAIDYGIKFLE 149
Query: 166 TSVKEDINVNSIFRYLTTKCLSELRQQEEEYSINGNGLP 204
TS K NV F L +++L ++ + + +G G P
Sbjct: 150 TSAKSSTNVEEAFFTLARDIMTKLNRKMNDSNSSGAGGP 188
>gi|294979229|gb|ADF50359.1| MIP21873p [Drosophila melanogaster]
Length = 182
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/145 (35%), Positives = 76/145 (52%), Gaps = 4/145 (2%)
Query: 64 RTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 123
RTI E + ++++L +WDTAGQE F IT AYYRGA ++ + SFE +W +
Sbjct: 23 RTI-ELDNKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITQEKSFENIKNWIRNI 81
Query: 124 -ENECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLT 182
EN ++ +L+ NK +L D+ V+ E + L+ G + M TS K INV F L
Sbjct: 82 EENASADVEKMLLGNKCELTDKRQVSKERGEQLAIEYGIKFMETSAKASINVEEAFLTLA 141
Query: 183 T--KCLSELRQQEEEYSINGNGLPP 205
+ K +E R + G+ L P
Sbjct: 142 SDIKAKTEKRMEANNPPKGGHQLKP 166
>gi|23463313|ref|NP_695229.1| ras-related protein Rab-8B [Rattus norvegicus]
gi|27734154|ref|NP_775589.1| ras-related protein Rab-8B [Mus musculus]
gi|2500066|sp|P70550.1|RAB8B_RAT RecName: Full=Ras-related protein Rab-8B; Flags: Precursor
gi|46576875|sp|P61028.1|RAB8B_MOUSE RecName: Full=Ras-related protein Rab-8B; Flags: Precursor
gi|1314637|gb|AAA99782.1| GTPase Rab8b [Rattus norvegicus]
gi|26351205|dbj|BAC39239.1| unnamed protein product [Mus musculus]
gi|37589192|gb|AAH59208.1| RAB8B, member RAS oncogene family [Mus musculus]
gi|74212761|dbj|BAE33350.1| unnamed protein product [Mus musculus]
gi|112292971|dbj|BAF02863.1| Rab8B [Mus musculus]
gi|148694186|gb|EDL26133.1| RAB8B, member RAS oncogene family, isoform CRA_c [Mus musculus]
gi|149028910|gb|EDL84251.1| RAB8B, member RAS oncogene family, isoform CRA_a [Rattus
norvegicus]
gi|165970644|gb|AAI58580.1| RAB8B, member RAS oncogene family [Rattus norvegicus]
gi|187956868|gb|AAI57975.1| RAB8B, member RAS oncogene family [Mus musculus]
gi|335775450|gb|AEH58576.1| Ras-related protein Rab-8B-like protein [Equus caballus]
Length = 207
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 85/159 (53%), Gaps = 3/159 (1%)
Query: 48 DSFEAAHSWKMKVSIK-RTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFS 106
D+F + + K RTI E +G++++L +WDTAGQE F IT AYYRGA ++ +
Sbjct: 31 DAFNTTFISTIGIDFKIRTI-ELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYD 89
Query: 107 TIDRDSFEAAHSWKMKV-ENECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMR 165
+ SF+ +W + E+ ++ +++ NK D+ D+ V+ E + L+ G + +
Sbjct: 90 ITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCDMNDKRQVSKERGEKLAIDYGIKFLE 149
Query: 166 TSVKEDINVNSIFRYLTTKCLSELRQQEEEYSINGNGLP 204
TS K NV F L +++L ++ + + +G G P
Sbjct: 150 TSAKSSTNVEEAFFTLARDIMTKLNRKMNDSNSSGAGGP 188
>gi|402218107|gb|EJT98185.1| ras-domain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 215
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 76/140 (54%), Gaps = 3/140 (2%)
Query: 68 ECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENEC 127
E +G + +L +WDTAGQE F IT +YYRGAQ ++ + R+SF+ W ++E C
Sbjct: 57 EVDGVKYKLSIWDTAGQERFRTITSSYYRGAQGVILVYDVSSRESFDDLPRWFTELETYC 116
Query: 128 G-EIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCL 186
G + V+V NKID V E + +G + +S K I+V+ +F+ + K +
Sbjct: 117 GPSVAKVIVGNKIDKEFSRRVPTAEGQAYAERMGALFLESSAKRGIHVDEVFQTIVRKIV 176
Query: 187 S--ELRQQEEEYSINGNGLP 204
+ EL Q+ + + N N +P
Sbjct: 177 ATPELWQKNKPGTANVNTMP 196
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Query: 2 INRI-CEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
+ RI +G + +L +WDTAGQE F IT +YYRGAQ ++ + R+SF+ W
Sbjct: 53 VQRIEVDGVKYKLSIWDTAGQERFRTITSSYYRGAQGVILVYDVSSRESFDDLPRW 108
>gi|72392251|ref|XP_846926.1| small GTP-binding protein Rab1 [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
gi|38224657|gb|AAR14146.1| Rab1 [Trypanosoma brucei]
gi|62175231|gb|AAX69377.1| small GTP-binding protein Rab1, putative [Trypanosoma brucei]
gi|70802956|gb|AAZ12860.1| small GTP-binding protein Rab1, putative [Trypanosoma brucei brucei
strain 927/4 GUTat10.1]
gi|261330114|emb|CBH13098.1| small GTP-binding protein Rab1, putative [Trypanosoma brucei
gambiense DAL972]
Length = 208
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 78/161 (48%), Gaps = 1/161 (0%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
DS+ ++ + V K + +G+ ++L +WDTAGQE F IT +YYRGA +I + T
Sbjct: 31 DSYTESYISTIGVDFKIRTLDIDGKVIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDT 90
Query: 108 IDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
D +SF +W +++ E + +LV NK DL+ + V + A + +LG + T
Sbjct: 91 TDMESFNNVKTWLSEIDKFASENVNKLLVGNKCDLVTKKAVDTQMAQEFADSLGIPFLET 150
Query: 167 SVKEDINVNSIFRYLTTKCLSELRQQEEEYSINGNGLPPYT 207
S KE NV + F + + Q G P T
Sbjct: 151 SAKESSNVETAFIEMAKNIKKRVAAQGANSGATAGGRPLLT 191
>gi|432102772|gb|ELK30248.1| Ras-related protein Rab-30 [Myotis davidii]
Length = 203
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/143 (35%), Positives = 75/143 (52%), Gaps = 1/143 (0%)
Query: 50 FEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTID 109
F + V E GE+V+L +WDTAGQE F +IT++YYR A A ++T+
Sbjct: 34 FPPGQGATIGVDFMIKTVEINGEKVKLQIWDTAGQERFRSITQSYYRSANALILTYDITC 93
Query: 110 RDSFEAAHSWKMKVEN-ECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSV 168
+SF W ++E ++ TVLV NKIDL ++ V+ + A+ S A + TS
Sbjct: 94 EESFRCLPEWLREIEQYASNKVITVLVGNKIDLAERREVSQQRAEEFSEAQDMYYLETSA 153
Query: 169 KEDINVNSIFRYLTTKCLSELRQ 191
KE NV +F L + + E RQ
Sbjct: 154 KESDNVEKLFLDLACRLIREARQ 176
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 33/49 (67%)
Query: 8 GEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
GE+V+L +WDTAGQE F +IT++YYR A A ++T+ +SF W
Sbjct: 55 GEKVKLQIWDTAGQERFRSITQSYYRSANALILTYDITCEESFRCLPEW 103
>gi|346321156|gb|EGX90756.1| GTP-binding protein SAS1 [Cordyceps militaris CM01]
Length = 227
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 77/157 (49%), Gaps = 13/157 (8%)
Query: 34 GAQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKA 93
G C++ FS DSF + + + K E +G+ V+L +WDTAGQE F IT A
Sbjct: 38 GKSCCLLRFS---EDSFTPSFITTIGIDFKIRTIELDGKRVKLQIWDTAGQERFRTITTA 94
Query: 94 YYRGAQACVITFSTIDRDSFEAAHS--------WKMKVENECGE-IPTVLVQNKIDLLDQ 144
YYRGA ++ + D SF HS W VE E + +L+ NK D D+
Sbjct: 95 YYRGAMGILLVYDVTDERSFN-THSLTNLDIRTWFQNVEQHATEGVNKILIGNKCDWEDK 153
Query: 145 SVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYL 181
V++ E+ L+ LG + S K +IN++ F L
Sbjct: 154 RVISEEQGQALADELGIPFLEVSAKSNINIDKAFYSL 190
>gi|350538277|ref|NP_001233823.1| small GTP-binding protein [Solanum lycopersicum]
gi|1053063|gb|AAA80678.1| small GTP-binding protein [Solanum lycopersicum]
Length = 203
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 77/159 (48%), Gaps = 5/159 (3%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
DS+ ++ + V K + +G+ ++L +WDTAGQE F IT +YYRGA ++ +
Sbjct: 31 DSYLESYISTIGVDFKIRTVDQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDV 90
Query: 108 IDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
D++SF W +++ + + +LV NK DL Q VV+ E A + +G M T
Sbjct: 91 TDQESFNNVKQWLSEIDRYASDNVNKLLVGNKCDLTAQKVVSTETAQAFADEIGIPFMET 150
Query: 167 SVKEDINVNSIFRYLTTKCLSELRQQEEEYSINGNGLPP 205
S K NV F + + + Q + N PP
Sbjct: 151 SAKNATNVEQAFMAMAASIKNRMASQPA----SNNARPP 185
>gi|294896680|ref|XP_002775678.1| RAB6 protein, putative [Perkinsus marinus ATCC 50983]
gi|239881901|gb|EER07494.1| RAB6 protein, putative [Perkinsus marinus ATCC 50983]
Length = 188
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/120 (38%), Positives = 68/120 (56%), Gaps = 3/120 (2%)
Query: 62 IKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKM 121
+ + I +G ++L LWDTAGQE F ++ AY R ACV+ F ++SF + SW
Sbjct: 29 VAKVITLDDGRMIKLQLWDTAGQERFRSLIPAYLRDTAACVVVFDLSSKESFNSVRSWVD 88
Query: 122 KVENE---CGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIF 178
+V +E G + VLV NK D+ D V+ EEA+ L+ LG + TS K I+++ IF
Sbjct: 89 QVRDEKGTNGGVEIVLVGNKADMADLRQVSNEEANALAEELGLKYFETSAKSGIDIDEIF 148
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 31/50 (62%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
+G ++L LWDTAGQE F ++ AY R ACV+ F ++SF + SW
Sbjct: 37 DGRMIKLQLWDTAGQERFRSLIPAYLRDTAACVVVFDLSSKESFNSVRSW 86
>gi|432908627|ref|XP_004077954.1| PREDICTED: ras-related protein Rab-13-like [Oryzias latipes]
Length = 200
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 77/156 (49%), Gaps = 4/156 (2%)
Query: 34 GAQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKA 93
G +I F+ D++ + + + K E +G++V+L +WDTAGQE F IT A
Sbjct: 20 GKTCLIIRFA---EDNYNTTYISTIGIDFKVKTIEVDGKKVKLQVWDTAGQERFKTITTA 76
Query: 94 YYRGAQACVITFSTIDRDSFEAAHSWKMKV-ENECGEIPTVLVQNKIDLLDQSVVAPEEA 152
YYRGA ++ + D SFE +W + EN + +L+ NK D+ + V+ E
Sbjct: 77 YYRGAMGIILVYDITDEKSFENIQNWMKSIRENASAGVTRMLLGNKCDVEAKRKVSKETG 136
Query: 153 DLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSE 188
+ L++ R TS K INV F+ L L +
Sbjct: 137 ETLAKEHAIRFFETSAKSSINVEESFQALARDILQK 172
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 33/51 (64%)
Query: 6 CEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
+G++V+L +WDTAGQE F IT AYYRGA ++ + D SFE +W
Sbjct: 52 VDGKKVKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNW 102
>gi|189502804|gb|ACE06783.1| unknown [Schistosoma japonicum]
Length = 248
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 70/135 (51%), Gaps = 1/135 (0%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
DSF +A + + K + + V+L +WDTAGQE + IT AYYRGA ++ +
Sbjct: 79 DSFTSAFVSTVGIDFKVKTIFRQDKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDI 138
Query: 108 IDRDSFEAAHSWKMKVENEC-GEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
+ +SF A W +++ VLV NK DL+D VV+ + L+ LG
Sbjct: 139 TNEESFNAVQDWVTQIKTYSWDNAQVVLVGNKCDLVDDRVVSVDRGRHLAHQLGLEFFEA 198
Query: 167 SVKEDINVNSIFRYL 181
S KE+INV ++F L
Sbjct: 199 SAKENINVKNVFERL 213
>gi|342184478|emb|CCC93960.1| putative small G-protein [Trypanosoma congolense IL3000]
Length = 226
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 67/116 (57%)
Query: 71 GEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGEI 130
G ++L+LWDTAGQE ++I ++YRGA ++ FST D++SF W +VE G
Sbjct: 55 GTRLKLVLWDTAGQESVNSIPDSFYRGAAVAIVLFSTDDQESFLKVEGWVRRVEKVNGVT 114
Query: 131 PTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCL 186
+L Q+K DL + + EA+ L+ L L R S K++ NV+ +F + + C+
Sbjct: 115 SMILCQSKFDLACKPEILTGEAEKLATKLQLPLFRVSAKDNFNVSQLFEFAASMCI 170
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 35/53 (66%)
Query: 8 GEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 60
G ++L+LWDTAGQE ++I ++YRGA ++ FST D++SF W +V
Sbjct: 55 GTRLKLVLWDTAGQESVNSIPDSFYRGAAVAIVLFSTDDQESFLKVEGWVRRV 107
>gi|339248933|ref|XP_003373454.1| GTP-binding protein Ypt2 [Trichinella spiralis]
gi|316970427|gb|EFV54365.1| GTP-binding protein Ypt2 [Trichinella spiralis]
Length = 178
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/133 (36%), Positives = 73/133 (54%), Gaps = 3/133 (2%)
Query: 48 DSFEAAHSWKMKVSIK-RTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFS 106
DSF + + K RTI E +G++++L +WDTAGQE F IT AYYRGA ++ +
Sbjct: 31 DSFNNTFISTIGIDFKIRTI-ELDGKKIKLQIWDTAGQERFRTITNAYYRGAMGILLVYE 89
Query: 107 TIDRDSFEAAHSWKMKV-ENECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMR 165
+ SFE +W + E+ + +++ NK D+ D+ V+ E L+ G + M
Sbjct: 90 ITNEKSFENIKNWVRNIEEHASANVEKIILGNKCDMEDKRQVSRERGAQLAIEYGVKFME 149
Query: 166 TSVKEDINVNSIF 178
TS K +INV S F
Sbjct: 150 TSAKANINVESAF 162
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 53/97 (54%), Gaps = 9/97 (9%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVSIKRTI 66
+G++++L +WDTAGQE F IT AYYRGA ++ + + SFE +W R I
Sbjct: 53 DGKKIKLQIWDTAGQERFRTITNAYYRGAMGILLVYEITNEKSFENIKNW------VRNI 106
Query: 67 KECEGEEV-RLMLWDTAGQEEFDAITKAYYRGAQACV 102
+E V +++L + E+ +++ RGAQ +
Sbjct: 107 EEHASANVEKIILGNKCDMEDKRQVSRE--RGAQLAI 141
>gi|345480659|ref|XP_003424189.1| PREDICTED: ras-related protein Rab-8A-like isoform 2 [Nasonia
vitripennis]
Length = 210
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 84/172 (48%), Gaps = 7/172 (4%)
Query: 35 AQACVITFSTIDRDSFEAAHSWKMKVSIK-RTIKECEGEEVRLMLWDTAGQEEFDAITKA 93
+ CV+ D+F + + K RTI E +G++++L +WDTAGQE F IT A
Sbjct: 20 GKTCVLF--RFSEDAFNTTFISTIGIDFKIRTI-ELDGKKIKLQIWDTAGQERFRTITTA 76
Query: 94 YYRGAQACVITFSTIDRDSFEAAHSWKMKV-ENECGEIPTVLVQNKIDLLDQSVVAPEEA 152
YYRGA ++ + + SFE +W + EN ++ +L+ NK +L + V+ E
Sbjct: 77 YYRGAMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMLLGNKCELTSKRQVSKERG 136
Query: 153 DLLSRALGCRLMRTSVKEDINVNSIFRYLT--TKCLSELRQQEEEYSINGNG 202
+ L+ G + M TS K INV F L K E R +E G G
Sbjct: 137 EALAIEYGIKFMETSAKSSINVEEAFFTLARDIKAKMEKRLKEASNPPKGGG 188
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 41/72 (56%), Gaps = 6/72 (8%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVSIKRTI 66
+G++++L +WDTAGQE F IT AYYRGA ++ + + SFE +W R I
Sbjct: 53 DGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDVTNEKSFENIKNW------IRNI 106
Query: 67 KECEGEEVRLML 78
+E +V ML
Sbjct: 107 EENASADVEKML 118
>gi|145508820|ref|XP_001440354.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74833819|emb|CAI39368.1| rab_A22 [Paramecium tetraurelia]
gi|124407571|emb|CAK72957.1| unnamed protein product [Paramecium tetraurelia]
Length = 205
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 88/180 (48%), Gaps = 9/180 (5%)
Query: 21 QEEFDAITKAYYRGAQAC-----VITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVR 75
Q+E+D + K G A ++ F+ + F + + V K + G+ V+
Sbjct: 4 QQEYDYLFKILLIGNSAVGKSSLLLRFAD---NVFNESFLPTIGVDFKIRTFDLNGKTVK 60
Query: 76 LMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGE-IPTVL 134
L +WDTAGQE F IT +YY+GA ++ + D+ SF+ +W +VE E + VL
Sbjct: 61 LQIWDTAGQERFKTITNSYYKGAHGIILVYDVTDKQSFKDVENWLAEVEKYANENVVRVL 120
Query: 135 VQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSELRQQEE 194
V NK+DL + V EE L+ +L R + TS K NV F L + +++ + E
Sbjct: 121 VGNKVDLESKREVTSEEGKELADSLNIRFIETSAKNSSNVEKAFITLANEIKAKVAKSSE 180
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 34/53 (64%)
Query: 8 GEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 60
G+ V+L +WDTAGQE F IT +YY+GA ++ + D+ SF+ +W +V
Sbjct: 56 GKTVKLQIWDTAGQERFKTITNSYYKGAHGIILVYDVTDKQSFKDVENWLAEV 108
>gi|410077757|ref|XP_003956460.1| hypothetical protein KAFR_0C03330 [Kazachstania africana CBS 2517]
gi|372463044|emb|CCF57325.1| hypothetical protein KAFR_0C03330 [Kazachstania africana CBS 2517]
Length = 210
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 88/169 (52%), Gaps = 8/169 (4%)
Query: 18 TAGQEEFDAITKAYYRG----AQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEE 73
+A + +D+I K G ++C++ D F + + + K E G++
Sbjct: 7 SATGKNYDSIMKILLIGDSGVGKSCLLV--RFVEDKFSPSFITTIGIDFKIKTVEINGKK 64
Query: 74 VRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW-KMKVENECGEIPT 132
++L LWDTAGQE F IT AYYRGA ++ + D +F + W K E+ +
Sbjct: 65 IKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDEKTFANINKWFKTVTEHANDDAQL 124
Query: 133 VLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYL 181
+LV NK D +D VV+ E+ ++L++ LG + +S K++ NV+ IF L
Sbjct: 125 LLVGNKND-MDTRVVSCEQGEVLAKELGLPFVESSAKDNNNVSDIFLSL 172
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 41/72 (56%), Gaps = 6/72 (8%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVSIKRTI 66
G++++L LWDTAGQE F IT AYYRGA ++ + D +F + W +T+
Sbjct: 61 NGKKIKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDEKTFANINKW------FKTV 114
Query: 67 KECEGEEVRLML 78
E ++ +L+L
Sbjct: 115 TEHANDDAQLLL 126
>gi|320584083|gb|EFW98295.1| GTP-binding protein [Ogataea parapolymorpha DL-1]
Length = 202
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 68/140 (48%), Gaps = 1/140 (0%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
D F + + + K E G +++L +WDTAGQE F IT AYYRGA +I +
Sbjct: 35 DKFNPSFITTIGIDFKIKTIELNGSKIKLQVWDTAGQERFRTITTAYYRGAMGIIIVYDV 94
Query: 108 IDRDSFEAAHSWKMKVENEC-GEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
D +SFE+ W V E LV NK D + V+ ++ +LL+ L M
Sbjct: 95 CDENSFESVKKWYQTVNQHAKDEAQLFLVGNKCDDTESRQVSEKQGELLAEELNVPFMEA 154
Query: 167 SVKEDINVNSIFRYLTTKCL 186
S K +NVN +F L + L
Sbjct: 155 SAKSGLNVNEVFYKLASLIL 174
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 41/71 (57%), Gaps = 6/71 (8%)
Query: 8 GEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVSIKRTIK 67
G +++L +WDTAGQE F IT AYYRGA +I + D +SFE+ W +T+
Sbjct: 58 GSKIKLQVWDTAGQERFRTITTAYYRGAMGIIIVYDVCDENSFESVKKW------YQTVN 111
Query: 68 ECEGEEVRLML 78
+ +E +L L
Sbjct: 112 QHAKDEAQLFL 122
>gi|66810383|ref|XP_638915.1| Rab GTPase [Dictyostelium discoideum AX4]
gi|166208510|sp|P34139.2|RAB1A_DICDI RecName: Full=Ras-related protein Rab-1A
gi|60467471|gb|EAL65493.1| Rab GTPase [Dictyostelium discoideum AX4]
Length = 202
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 75/143 (52%), Gaps = 2/143 (1%)
Query: 64 RTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 123
RTI E G+ ++L +WDTAGQE F IT +YYRGA ++ + D+ +FE W ++
Sbjct: 48 RTI-ELNGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDKLTFENVRQWLQEI 106
Query: 124 EN-ECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLT 182
+ C + +LV NK DL+ + VV A + +L + TS K+ NV F +
Sbjct: 107 DRFACENVNKLLVGNKSDLVAKKVVDFNTAKAFADSLQIPFLETSAKQSTNVEQAFMTMA 166
Query: 183 TKCLSELRQQEEEYSINGNGLPP 205
T+ + L + +++ N + P
Sbjct: 167 TEIKNRLTASQPTQTVDKNKVVP 189
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 31/50 (62%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
G+ ++L +WDTAGQE F IT +YYRGA ++ + D+ +FE W
Sbjct: 53 NGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDKLTFENVRQW 102
>gi|18034781|ref|NP_542147.1| GTP-binding protein Rab-3D [Rattus norvegicus]
gi|6093902|sp|Q63942.2|RAB3D_RAT RecName: Full=GTP-binding protein Rab-3D
gi|2253637|gb|AAB81202.1| GTP-binding protein rab3d [Rattus norvegicus]
gi|51859116|gb|AAH81741.1| RAB3D, member RAS oncogene family [Rattus norvegicus]
gi|149020457|gb|EDL78262.1| RAB3D, member RAS oncogene family, isoform CRA_a [Rattus
norvegicus]
gi|149020458|gb|EDL78263.1| RAB3D, member RAS oncogene family, isoform CRA_a [Rattus
norvegicus]
gi|149020459|gb|EDL78264.1| RAB3D, member RAS oncogene family, isoform CRA_a [Rattus
norvegicus]
gi|149020461|gb|EDL78266.1| RAB3D, member RAS oncogene family, isoform CRA_a [Rattus
norvegicus]
Length = 219
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 78/160 (48%), Gaps = 2/160 (1%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
DSF A + + K + ++L +WDTAGQE + IT AYYRGA ++ +
Sbjct: 45 DSFTPAFVSTVGIDFKVKTVYRHDKRIKLQIWDTAGQERYRTITTAYYRGAMGFLLMYDI 104
Query: 108 IDRDSFEAAHSWKMKVENEC-GEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
+++SF A W +++ +LV NK DL D+ VV+ E+ L+ LG
Sbjct: 105 ANQESFTAVQDWATQIKTYSWDNAQVILVGNKCDLEDERVVSAEDGQRLAGDLGFEFFEA 164
Query: 167 SVKEDINVNSIFRYLTTKCLSELRQQEEEYSING-NGLPP 205
S KE+INV +F L ++ + E S G NG P
Sbjct: 165 SAKENINVKQVFERLVDIICDKMNESLEPSSSPGSNGKGP 204
>gi|340501528|gb|EGR28304.1| Ras family protein, putative [Ichthyophthirius multifiliis]
gi|340507795|gb|EGR33697.1| Ras family protein, putative [Ichthyophthirius multifiliis]
Length = 203
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 95/189 (50%), Gaps = 13/189 (6%)
Query: 22 EEFDAITKAYYRG----AQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLM 77
+ +DA+ K G + CV+ D D+F H + + K + +G++V+L
Sbjct: 6 QNYDAVLKFLVIGDSGVGKTCVL-LKYCD-DTFTNVHLTTIGIDYKLKQEIIDGKKVKLQ 63
Query: 78 LWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENEC-GEIPTVLVQ 136
+WDTAGQE F IT++YY+GA ++ +S ID +SF+ W ++ + +++
Sbjct: 64 IWDTAGQERFKTITQSYYKGATGIILAYSVIDPNSFKNITDWMKQINMHADANVKKIIIA 123
Query: 137 NKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLTTKC-----LSELRQ 191
NK D+ D+ V+ +E + L+ TS K+ +N+ FR + + S L+Q
Sbjct: 124 NKCDMKDERKVSTKEGEDLAEKYNVNYFETSAKDGLNIREAFRCIAKQAFDTIDFSSLKQ 183
Query: 192 QEEEYSING 200
Q S+NG
Sbjct: 184 Q-GVISVNG 191
Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 41/58 (70%)
Query: 5 ICEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVSI 62
I +G++V+L +WDTAGQE F IT++YY+GA ++ +S ID +SF+ W ++++
Sbjct: 54 IIDGKKVKLQIWDTAGQERFKTITQSYYKGATGIILAYSVIDPNSFKNITDWMKQINM 111
>gi|326493844|dbj|BAJ85384.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 203
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 80/162 (49%), Gaps = 6/162 (3%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
DS+ ++ + V K E +G+ ++L +WDTAGQE F IT +YYRGA ++ +
Sbjct: 31 DSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDV 90
Query: 108 IDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
D++SF W +++ E + +LV NK DL + VV+ E L+ +G + T
Sbjct: 91 TDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLAESRVVSYEAGKALADEIGIPFLET 150
Query: 167 SVKEDINVNSIFRYLTTKCLSELRQQEEEYSINGNGLPPYTI 208
S K+ NV F + + + + Q GN P T+
Sbjct: 151 SAKDATNVEKAFMTMAAEIKNRMASQPA-----GNASKPATV 187
>gi|417397109|gb|JAA45588.1| Putative rab subfamily protein of small gtpase [Desmodus rotundus]
Length = 207
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 85/159 (53%), Gaps = 3/159 (1%)
Query: 48 DSFEAAHSWKMKVSIK-RTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFS 106
D+F + + K RTI E +G++++L +WDTAGQE F IT AYYRGA ++ +
Sbjct: 31 DAFNTTFISTIGIDFKIRTI-ELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYD 89
Query: 107 TIDRDSFEAAHSWKMKV-ENECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMR 165
+ SF+ +W + E+ ++ +++ NK D+ D+ V+ E + L+ G + +
Sbjct: 90 ITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCDMNDRRQVSKERGEKLAIDYGIKFLE 149
Query: 166 TSVKEDINVNSIFRYLTTKCLSELRQQEEEYSINGNGLP 204
TS K NV F L +++L ++ + + +G G P
Sbjct: 150 TSAKSSTNVEEAFFTLARDIMTKLNRKMNDSNSSGAGGP 188
>gi|328866656|gb|EGG15039.1| Rab GTPase [Dictyostelium fasciculatum]
Length = 202
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 79/161 (49%), Gaps = 1/161 (0%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
D++ + + V K E G+ ++L +WDTAGQE F IT +YYRGA ++ +
Sbjct: 31 DTYSESFISTIGVDFKIRTIELNGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDV 90
Query: 108 IDRDSFEAAHSWKMKVEN-ECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
DR +F+ W +++ C + +LV NK DL+ + VV A + L + T
Sbjct: 91 TDRVTFDNVRQWLQEIDRFACESVNKLLVGNKSDLVAKKVVDYNTAKAFADLLQIPFLET 150
Query: 167 SVKEDINVNSIFRYLTTKCLSELRQQEEEYSINGNGLPPYT 207
S K+ NV F + T+ + L + +++ N + P T
Sbjct: 151 SAKQSTNVEQAFMTMATEIKNRLTASQPTQTVDRNKVVPGT 191
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 31/50 (62%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
G+ ++L +WDTAGQE F IT +YYRGA ++ + DR +F+ W
Sbjct: 53 NGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDRVTFDNVRQW 102
>gi|324528770|gb|ADY48949.1| Ras-related protein Rab-10 [Ascaris suum]
Length = 201
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 77/148 (52%), Gaps = 1/148 (0%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
D+F + + K E +G++++L +WDTAGQE F IT +YYRGA ++ +
Sbjct: 32 DAFNTTFISTIGIDFKIKTIELKGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDI 91
Query: 108 IDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
+ SF+ W ++ E + +L+ NK D+ D+ VV+ E + ++ G R + T
Sbjct: 92 TNAKSFDNIAKWLRNIDEHASEDVEKMLLGNKCDMADRRVVSRERGEKIANDHGIRFLET 151
Query: 167 SVKEDINVNSIFRYLTTKCLSELRQQEE 194
S K +I ++ F L L ++ +EE
Sbjct: 152 SAKANIQIDKAFYDLAEAILDKMPNKEE 179
>gi|302507522|ref|XP_003015722.1| hypothetical protein ARB_06033 [Arthroderma benhamiae CBS 112371]
gi|291179290|gb|EFE35077.1| hypothetical protein ARB_06033 [Arthroderma benhamiae CBS 112371]
Length = 425
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/152 (34%), Positives = 77/152 (50%), Gaps = 6/152 (3%)
Query: 34 GAQACVITFSTIDRDSFEAAHSWKMKVSIK-RTIKECEGEEVRLMLWDTAGQEEFDAITK 92
G C++ FS DSF + + + K RTI +G+ V+L +WDTAGQE F IT
Sbjct: 241 GKSCCLLRFS---EDSFTPSFITTIGIDFKIRTI-NLDGKRVKLQIWDTAGQERFRTITT 296
Query: 93 AYYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEE 151
AYYR A ++ + D SF+ +W VE E + +L+ NK D ++ V E+
Sbjct: 297 AYYRNAMGILLVYDVTDERSFKNIRTWFSNVEQHASEGVHKILIGNKCDGEEKRAVTVEQ 356
Query: 152 ADLLSRALGCRLMRTSVKEDINVNSIFRYLTT 183
L+ LG + S K +INV+ F L T
Sbjct: 357 GQQLANELGIPFLEVSAKNNINVDKAFYSLAT 388
>gi|224496098|ref|NP_001139069.1| RAB3D, member RAS oncogene family, a [Danio rerio]
Length = 223
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/136 (36%), Positives = 74/136 (54%), Gaps = 3/136 (2%)
Query: 48 DSFEAAHSWKMKVSIK-RTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFS 106
DSF +A + + K +T+ E + V+L +WDTAGQE + IT AYYRGA ++ +
Sbjct: 48 DSFTSAFVSTVGIDFKVKTVYRNE-KRVKLQIWDTAGQERYRTITTAYYRGAMGFLLMYD 106
Query: 107 TIDRDSFEAAHSWKMKVENEC-GEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMR 165
++DSF A W +++ +LV NK DL D +VA E+ L+ LG +
Sbjct: 107 ITNQDSFYAVQDWATQIKTYSWDNAQVILVGNKCDLEDDRLVAREDGQRLANELGFQFFE 166
Query: 166 TSVKEDINVNSIFRYL 181
S K++INV +F L
Sbjct: 167 ASAKDNINVKQVFERL 182
>gi|432092263|gb|ELK24887.1| Ras-related protein Rab-8B [Myotis davidii]
Length = 207
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 84/159 (52%), Gaps = 3/159 (1%)
Query: 48 DSFEAAHSWKMKVSIK-RTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFS 106
D+F + + K RTI E +G++++L +WDTAGQE F IT AYYRGA ++ +
Sbjct: 31 DAFNTTFISTIGIDFKIRTI-ELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYD 89
Query: 107 TIDRDSFEAAHSWKMKVENECG-EIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMR 165
+ SF+ +W +E ++ +++ NK D+ D+ V+ E + L+ G + +
Sbjct: 90 ITNEKSFDNIKNWIRNIEEHASLDVERMILGNKCDMNDKRQVSKERGEKLAIDYGIKFLE 149
Query: 166 TSVKEDINVNSIFRYLTTKCLSELRQQEEEYSINGNGLP 204
TS K NV F L +++L ++ + + +G G P
Sbjct: 150 TSAKSSTNVEEAFFTLARDIMTKLNRKMNDSNSSGAGGP 188
>gi|413938044|gb|AFW72595.1| hypothetical protein ZEAMMB73_730860, partial [Zea mays]
Length = 207
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 72/146 (49%), Gaps = 1/146 (0%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
DS+ ++ + V K E +G+ ++L +WDTAGQE F IT +YYRGA +I +
Sbjct: 35 DSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDV 94
Query: 108 IDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
D++SF W +++ + + +LV NK DL VVA E A + +G M T
Sbjct: 95 TDQESFNNVKQWLNEIDRYASDNVNKLLVGNKSDLTANKVVATETAKAFADEMGIPFMET 154
Query: 167 SVKEDINVNSIFRYLTTKCLSELRQQ 192
S K INV F + + Q
Sbjct: 155 SAKNAINVEQAFMAMAASIKDRMASQ 180
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 32/50 (64%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
+G+ ++L +WDTAGQE F IT +YYRGA +I + D++SF W
Sbjct: 57 DGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQW 106
>gi|412986893|emb|CCO15319.1| predicted protein [Bathycoccus prasinos]
Length = 204
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 76/151 (50%), Gaps = 1/151 (0%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
D+++ ++ + V K E EG+ ++L +WDTAGQE F IT +YYRGA ++ +
Sbjct: 31 DTYQESYISTIGVDFKIRTVELEGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDV 90
Query: 108 IDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
D++SF +W +++ E + +LV NK DL + VV A + +G M T
Sbjct: 91 TDQESFNNVKTWLSEIDRYANENVNKLLVGNKSDLTSKKVVDYATAKAFADEIGIPFMET 150
Query: 167 SVKEDINVNSIFRYLTTKCLSELRQQEEEYS 197
S K NV F + + + + Q + S
Sbjct: 151 SAKNATNVEQAFVTMANEIKTRMASQPQAAS 181
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 33/50 (66%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
EG+ ++L +WDTAGQE F IT +YYRGA ++ + D++SF +W
Sbjct: 53 EGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKTW 102
>gi|328871755|gb|EGG20125.1| Rab GTPase [Dictyostelium fasciculatum]
Length = 212
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/146 (33%), Positives = 71/146 (48%), Gaps = 4/146 (2%)
Query: 34 GAQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKA 93
G ++ FS DSF + + + K E EG+ ++L +WDTAGQE F IT A
Sbjct: 30 GKSCLLLRFS---EDSFTPSFITTIGIDFKIRTIELEGKRIKLQIWDTAGQERFRTITTA 86
Query: 94 YYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEA 152
YYRGA ++ + D SF +W +E E + +L+ NK DL ++ VV
Sbjct: 87 YYRGAMGILLVYDVTDEKSFGNIRNWIRNIEQHATESVNKMLIGNKCDLPEKKVVDSSRG 146
Query: 153 DLLSRALGCRLMRTSVKEDINVNSIF 178
L+ G + + TS K INV F
Sbjct: 147 KALADEYGIKFLETSAKNSINVEEAF 172
Score = 59.3 bits (142), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 39/72 (54%), Gaps = 6/72 (8%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVSIKRTI 66
EG+ ++L +WDTAGQE F IT AYYRGA ++ + D SF +W R I
Sbjct: 63 EGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDEKSFGNIRNW------IRNI 116
Query: 67 KECEGEEVRLML 78
++ E V ML
Sbjct: 117 EQHATESVNKML 128
>gi|426233180|ref|XP_004010595.1| PREDICTED: ras-related protein Rab-8B [Ovis aries]
Length = 207
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 80/142 (56%), Gaps = 2/142 (1%)
Query: 64 RTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 123
RTI E +G++++L +WDTAGQE F IT AYYRGA ++ + + SF+ +W +
Sbjct: 48 RTI-ELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNI 106
Query: 124 -ENECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLT 182
E+ ++ +++ NK D+ D+ V+ E + L+ G + + TS K +NV F L
Sbjct: 107 EEHASSDVERMILGNKCDMNDKRQVSKERGEKLAIDYGIKFLETSAKSSMNVEEAFFTLA 166
Query: 183 TKCLSELRQQEEEYSINGNGLP 204
+++L ++ + + +G G P
Sbjct: 167 RDIMTKLNRKMNDSNSSGAGGP 188
>gi|194762816|ref|XP_001963530.1| GF20241 [Drosophila ananassae]
gi|190629189|gb|EDV44606.1| GF20241 [Drosophila ananassae]
Length = 204
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 79/161 (49%), Gaps = 2/161 (1%)
Query: 34 GAQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKA 93
G I F D D+F + + + K E +G++++L +WDTAGQE F IT +
Sbjct: 19 GVGKTCILFRFSD-DAFTSTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQERFHTITTS 77
Query: 94 YYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEA 152
YYRGA ++ + + SFE W ++ E + +++ NK D+ D+ VV E
Sbjct: 78 YYRGAMGIMLVYDITNEKSFENIVKWLRNIDEHANEDVEKMILGNKCDMTDKRVVNKERG 137
Query: 153 DLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSELRQQE 193
+ ++R G R M TS K + N+ F L L + +E
Sbjct: 138 EAIAREHGIRFMETSAKSNTNIEEAFCELAQAILDKTSGRE 178
>gi|294953443|ref|XP_002787766.1| hypothetical protein Pmar_PMAR012543 [Perkinsus marinus ATCC 50983]
gi|239902790|gb|EER19562.1| hypothetical protein Pmar_PMAR012543 [Perkinsus marinus ATCC 50983]
Length = 585
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 83/177 (46%), Gaps = 5/177 (2%)
Query: 5 ICEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVSIKR 64
I EG E+ L+ T G +F ++ ++C++T D + H + V K
Sbjct: 350 IKEGAELTLVSCQTEGDFKFKLVSVGDSGVGKSCLLT--RFVNDVYSDFHVSTIGVDFKT 407
Query: 65 TIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVE 124
+ +G V+L LWDTAGQE F +T YYR A V+ + +R SF+ W ++E
Sbjct: 408 VVTMVKGRLVKLQLWDTAGQERFSVVTGNYYRNADGFVLVYDATNRTSFDHVDQWLSQIE 467
Query: 125 NECGEIPT---VLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIF 178
P +LV NK DL + VV P E + ++ +G + S K NV+ F
Sbjct: 468 QHHDLGPNTIKILVGNKHDLSSEVVVTPAEGEKKAQQIGAFFVAASAKTASNVDYAF 524
>gi|145487073|ref|XP_001429542.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74831315|emb|CAI39281.1| rab_B69 [Paramecium tetraurelia]
gi|124396635|emb|CAK62144.1| unnamed protein product [Paramecium tetraurelia]
Length = 226
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 81/156 (51%), Gaps = 3/156 (1%)
Query: 35 AQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAY 94
++C++ T R F H + V + ++++L +WDTAGQE F +IT++Y
Sbjct: 19 GKSCLLLQFTDSR--FRNEHDATIGVEFGSRNLKINDKQIKLQIWDTAGQESFKSITRSY 76
Query: 95 YRGAQACVITFSTIDRDSFEAAHSWKMKVEN-ECGEIPTVLVQNKIDLLDQSVVAPEEAD 153
YRG+ ++ F R SFE W +++ C +I V+V NKIDL ++ V EEA
Sbjct: 77 YRGSIGGILVFDVTSRQSFEDLQKWYQEIQGYACDKIEMVIVGNKIDLEERREVKTEEAR 136
Query: 154 LLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSEL 189
++ G TS K NV+++F + + L ++
Sbjct: 137 RYAQKQGFAYFETSAKTGENVDNVFETMANQVLKKI 172
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 34/52 (65%)
Query: 9 EEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 60
++++L +WDTAGQE F +IT++YYRG+ ++ F R SFE W ++
Sbjct: 54 KQIKLQIWDTAGQESFKSITRSYYRGSIGGILVFDVTSRQSFEDLQKWYQEI 105
>gi|384483936|gb|EIE76116.1| GTP-binding protein ypt1 [Rhizopus delemar RA 99-880]
Length = 212
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/142 (35%), Positives = 78/142 (54%), Gaps = 12/142 (8%)
Query: 48 DSFEAAHSWKMKVSIK-RTIKECEGEEVRLML---------WDTAGQEEFDAITKAYYRG 97
D++ ++ + V K RTI E EG+ V+L + WDTAGQE F IT +YYRG
Sbjct: 31 DTYTESYISTIGVDFKIRTI-ELEGKTVKLQIKNSLVISLQWDTAGQERFRTITSSYYRG 89
Query: 98 AQACVITFSTIDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLS 156
A ++ + D DSF+ W +++ E + +LV NK DL D+ VV+ E+A+ L+
Sbjct: 90 AHGIIVVYDVTDDDSFQHVKQWLQEIDRYAAEGVNKLLVGNKSDLTDKKVVSTEQANELA 149
Query: 157 RALGCRLMRTSVKEDINVNSIF 178
++ L+ TS K+ NV F
Sbjct: 150 ESIKIPLLETSAKDATNVEQAF 171
>gi|365760935|gb|EHN02617.1| Sec4p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 215
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 86/176 (48%), Gaps = 8/176 (4%)
Query: 11 VRLMLWDTAGQEEFDAITKAYYRG----AQACVITFSTIDRDSFEAAHSWKMKVSIKRTI 66
+R + + + +D+I K G ++C++ D F + + + K
Sbjct: 4 LRTVSASSGNGKSYDSIMKILLIGDSGVGKSCLLV--RFVEDKFNPSFITTIGIDFKIKT 61
Query: 67 KECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV-EN 125
+ G++V+L LWDTAGQE F IT AYYRGA ++ + D +F W V E+
Sbjct: 62 VDINGKKVKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEH 121
Query: 126 ECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYL 181
E +LV NK D +D VV ++ + L++ LG + +S K D NVN IF L
Sbjct: 122 ATDEAQLLLVGNKSD-MDTRVVTVDQGEALAKELGIPFIESSAKNDDNVNEIFFTL 176
Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 40/72 (55%), Gaps = 6/72 (8%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVSIKRTI 66
G++V+L LWDTAGQE F IT AYYRGA ++ + D +F W +T+
Sbjct: 65 NGKKVKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQW------FKTV 118
Query: 67 KECEGEEVRLML 78
E +E +L+L
Sbjct: 119 NEHATDEAQLLL 130
>gi|71019037|ref|XP_759749.1| hypothetical protein UM03602.1 [Ustilago maydis 521]
gi|46099272|gb|EAK84505.1| hypothetical protein UM03602.1 [Ustilago maydis 521]
Length = 233
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 74/144 (51%), Gaps = 4/144 (2%)
Query: 48 DSFEAAHSWKMKVSIKRTIK--ECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITF 105
D F + + + IK E G+ +L +WDTAGQE F +T +YYRGAQ +IT+
Sbjct: 32 DEFLSPEETTATIGVDYRIKGIEVGGKRFKLSIWDTAGQERFRTLTSSYYRGAQGVIITY 91
Query: 106 STIDRDSFEAAHSWKMKVE--NECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRL 163
RD+F+A +W ++E ++ V+V NK+D VV +E + +GC
Sbjct: 92 DVTQRDTFDALPTWFNELETFTTSDDVVKVIVGNKVDKEFSRVVTTKEGQEFAEKMGCLF 151
Query: 164 MRTSVKEDINVNSIFRYLTTKCLS 187
+ S K+ + VN F L + +S
Sbjct: 152 VECSAKKGVGVNGAFDELVNRIIS 175
Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 34/49 (69%)
Query: 8 GEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
G+ +L +WDTAGQE F +T +YYRGAQ +IT+ RD+F+A +W
Sbjct: 57 GKRFKLSIWDTAGQERFRTLTSSYYRGAQGVIITYDVTQRDTFDALPTW 105
>gi|353464471|gb|AER06797.1| putative rab GTPase [Rhizoctonia solani]
Length = 175
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 45/119 (37%), Positives = 64/119 (53%), Gaps = 2/119 (1%)
Query: 64 RTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 123
RTI E +G+ ++L +WDTAGQE F IT AYYRGA ++ + D SF +W V
Sbjct: 17 RTI-ELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDEKSFNNIRTWHANV 75
Query: 124 ENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYL 181
E E + +L+ NK D +D+ + E+ L+ LG + M TS K + V F L
Sbjct: 76 EQHASEGVNKILIGNKSDWVDKKAITEEQGRALADELGIKFMETSAKANEGVEDAFFAL 134
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 32/54 (59%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 60
+G+ ++L +WDTAGQE F IT AYYRGA ++ + D SF +W V
Sbjct: 22 DGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDEKSFNNIRTWHANV 75
>gi|256066501|ref|XP_002570541.1| rab15 13 10 1 35 5 and [Schistosoma mansoni]
gi|350645538|emb|CCD59778.1| rab15, 13, 10, 1, 35, 5, and, putative [Schistosoma mansoni]
Length = 211
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 86/173 (49%), Gaps = 10/173 (5%)
Query: 34 GAQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKA 93
G ++ FS +SF + + K E +G++++L +WDTAGQE F IT A
Sbjct: 26 GKTNLLLRFSD---NSFSKTFIATIGIDFKVRTIEIDGKKIKLQIWDTAGQERFRTITTA 82
Query: 94 YYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEA 152
YYRGA ++ + + DS+ +W + E + +L+ NK DL Q VV E
Sbjct: 83 YYRGAMGIMLVYDVTNLDSYHNITTWMNNITEHTNEGVAKMLLGNKCDLEAQRVVKYENG 142
Query: 153 DLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSELRQQEEEYSINGNGLPP 205
L+++ G + TS K INV+ F L K + ++E+E ++N PP
Sbjct: 143 FKLAQSYGISFIETSAKGGINVSEAFTILARKIKA---KREQEANLNN---PP 189
>gi|260821258|ref|XP_002605950.1| hypothetical protein BRAFLDRAFT_253798 [Branchiostoma floridae]
gi|229291287|gb|EEN61960.1| hypothetical protein BRAFLDRAFT_253798 [Branchiostoma floridae]
Length = 218
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 70/135 (51%), Gaps = 1/135 (0%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
DSF +A + + K + + V+L +WDTAGQE + IT AYYRGA ++ +
Sbjct: 44 DSFTSAFVSTVGIDFKVKTVFRQDKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDV 103
Query: 108 IDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
+ DSF + W +++ + VLV NK DL D+ V++ E L+ LG T
Sbjct: 104 TNEDSFNSVQDWCTQIKTYSWDNAQVVLVGNKCDLEDERVISTERGKQLADQLGLEFFET 163
Query: 167 SVKEDINVNSIFRYL 181
S KE+INV F L
Sbjct: 164 SAKENINVKQTFERL 178
>gi|406604644|emb|CCH43902.1| Ras-related protein [Wickerhamomyces ciferrii]
Length = 203
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 76/157 (48%), Gaps = 2/157 (1%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
D F + + + K E +G+ ++L +WDTAGQE F IT AYYRGA ++ +
Sbjct: 36 DKFNPSFITTIGIDFKIRTIEIDGKRIKLQVWDTAGQERFRTITTAYYRGATGIILVYDV 95
Query: 108 IDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
D +FE +W V E +LV NK D D V+ E + L++ LG +
Sbjct: 96 TDERTFENVRNWFQTVHQHANEDTQLILVGNKNDEKDLRAVSSERGESLAQELGIPFLEA 155
Query: 167 SVKEDINVNSIFRYLTTKCLSELRQQEEEYSINGNGL 203
S K + NV+ +F + K + E + E + N G+
Sbjct: 156 SAKTNDNVDELF-FKLAKIIQENNKSNENLNSNNGGI 191
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 44/80 (55%), Gaps = 6/80 (7%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVSIKRTI 66
+G+ ++L +WDTAGQE F IT AYYRGA ++ + D +FE +W +T+
Sbjct: 58 DGKRIKLQVWDTAGQERFRTITTAYYRGATGIILVYDVTDERTFENVRNW------FQTV 111
Query: 67 KECEGEEVRLMLWDTAGQEE 86
+ E+ +L+L E+
Sbjct: 112 HQHANEDTQLILVGNKNDEK 131
>gi|45201075|ref|NP_986645.1| AGL021Wp [Ashbya gossypii ATCC 10895]
gi|44985858|gb|AAS54469.1| AGL021Wp [Ashbya gossypii ATCC 10895]
gi|374109896|gb|AEY98801.1| FAGL021Wp [Ashbya gossypii FDAG1]
Length = 212
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 83/169 (49%), Gaps = 8/169 (4%)
Query: 18 TAGQEEFDAITKAYYRG----AQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEE 73
++G + +D+I K G ++C++ D F + + + K + G++
Sbjct: 10 SSGAKNYDSIMKILLVGDSGVGKSCLLV--RFVEDKFSPSFITTIGIDFKIKAVDINGKK 67
Query: 74 VRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENECG-EIPT 132
++L LWDTAGQE F IT AYYRGA ++ + D +FE W V E
Sbjct: 68 IKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFENIRQWFTTVNQHANEEAQL 127
Query: 133 VLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYL 181
+LV NK D +D V E+ + L++ LG + S K+D NV+ IF L
Sbjct: 128 LLVGNKKD-MDTRAVTYEQGESLAKELGVPFIEASAKDDENVSDIFFTL 175
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 47/90 (52%), Gaps = 8/90 (8%)
Query: 8 GEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVSIKRTIK 67
G++++L LWDTAGQE F IT AYYRGA ++ + D +FE W T+
Sbjct: 65 GKKIKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFENIRQWFT------TVN 118
Query: 68 ECEGEEVRLMLWDTAGQEEFDAITKAYYRG 97
+ EE +L+L +++ D Y +G
Sbjct: 119 QHANEEAQLLL--VGNKKDMDTRAVTYEQG 146
>gi|359497196|ref|XP_002271220.2| PREDICTED: ras-related protein RABH1e-like [Vitis vinifera]
Length = 207
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/152 (32%), Positives = 76/152 (50%), Gaps = 6/152 (3%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
D F+A + + + E +RL LWDTAGQE F ++ +Y R + VI +
Sbjct: 32 DKFDATYQATIGIDFLSKTMYLEDRTIRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDV 91
Query: 108 IDRDSFEAAHSWKMKVENECG-EIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
+R SF W +V E G ++ VLV NK DL+D+ V+ EE D SR G + T
Sbjct: 92 GNRQSFLNTSKWIEEVRTERGTDVIIVLVGNKTDLVDKRQVSIEEGDTKSRDFGVMFIET 151
Query: 167 SVKEDINVNSIFRYLTT-----KCLSELRQQE 193
S K N+ +FR + + + LS +Q++
Sbjct: 152 SAKAGFNIKPLFRKIASALPGMETLSSTKQED 183
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 31/59 (52%)
Query: 6 CEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVSIKR 64
E +RL LWDTAGQE F ++ +Y R + VI + +R SF W +V +R
Sbjct: 53 LEDRTIRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDVGNRQSFLNTSKWIEEVRTER 111
>gi|115916189|ref|XP_788933.2| PREDICTED: ras-related protein Rab-10 isoform 2 [Strongylocentrotus
purpuratus]
Length = 224
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 81/163 (49%), Gaps = 2/163 (1%)
Query: 32 YRGAQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAIT 91
Y G A + FST R S + + + K E G++++L +WDTAGQE F IT
Sbjct: 40 YVGKTALITIFST-GRASPYRDYQTTIGIDFKIKTVELNGKKIKLQIWDTAGQERFHTIT 98
Query: 92 KAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPE 150
+YYRGA ++ + +F+ W ++ E + +L+ NK D+ D+ ++ +
Sbjct: 99 TSYYRGAMGIMLVYDITQEKTFDNIAKWLRNIQEHANEDVEKMLLGNKCDMDDKRMINKD 158
Query: 151 EADLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSELRQQE 193
+ +++ G + M TS K +INV F L L + Q++
Sbjct: 159 RGETIAKENGIKFMETSAKANINVEQAFMTLAADILKKYPQRD 201
>gi|156383574|ref|XP_001632908.1| predicted protein [Nematostella vectensis]
gi|156219971|gb|EDO40845.1| predicted protein [Nematostella vectensis]
Length = 184
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 80/154 (51%), Gaps = 3/154 (1%)
Query: 35 AQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAY 94
+ C+I F D ++F + + + K E G++++L +WDTAGQE F IT AY
Sbjct: 21 GKTCII-FRFAD-NTFNPSFISTIGIDFKIKTLELGGKKIKLQIWDTAGQERFHTITTAY 78
Query: 95 YRGAQACVITFSTIDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEAD 153
YRGA ++ + + SF W K+++ E + +LV NK D+ D+ V++ + +
Sbjct: 79 YRGAMGIMLVYDVTNEKSFSNISKWLKKIDDHANEDVKRMLVGNKCDMYDKRVISQTKGE 138
Query: 154 LLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLS 187
L+ + G + TS +INV F LT L+
Sbjct: 139 QLASSYGISFIETSALSNINVEKSFVVLTEDILN 172
>gi|4586580|dbj|BAA76422.1| rab-type small GTP-binding protein [Cicer arietinum]
Length = 202
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 76/159 (47%), Gaps = 6/159 (3%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
DS+ ++ + V K E +G+ ++L +WDTAGQE F IT +YYRGA ++ +
Sbjct: 31 DSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDV 90
Query: 108 IDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
D++SF W +++ E + +LV NK DL VV+ E A + +G M T
Sbjct: 91 TDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLAANKVVSSETAKAFADEIGIPFMET 150
Query: 167 SVKEDINVNSIFRYLTTKCLSELRQQEEEYSINGNGLPP 205
S K NV F + + + + Q N PP
Sbjct: 151 SAKNATNVEQAFMAMAAEIKNRMASQPAN-----NARPP 184
>gi|294888433|ref|XP_002772463.1| RAB6 protein, putative [Perkinsus marinus ATCC 50983]
gi|239876689|gb|EER04279.1| RAB6 protein, putative [Perkinsus marinus ATCC 50983]
Length = 215
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 46/120 (38%), Positives = 67/120 (55%), Gaps = 3/120 (2%)
Query: 62 IKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKM 121
+ + I +G ++L LWDTAGQE F ++ AY R ACV+ F ++SF + SW
Sbjct: 56 VAKVITLDDGRMIKLQLWDTAGQERFRSLIPAYLRDTAACVVVFDLSSKESFNSVRSWVD 115
Query: 122 KVENE---CGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIF 178
+V +E G + VLV NK D+ D V+ EEA L+ LG + TS K I+++ IF
Sbjct: 116 QVRDEKGTNGGVEIVLVGNKADMADLRQVSNEEASALAEELGLKYFETSAKSGIDIDEIF 175
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 31/50 (62%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
+G ++L LWDTAGQE F ++ AY R ACV+ F ++SF + SW
Sbjct: 64 DGRMIKLQLWDTAGQERFRSLIPAYLRDTAACVVVFDLSSKESFNSVRSW 113
>gi|19112997|ref|NP_596205.1| GTPase Ypt1 [Schizosaccharomyces pombe 972h-]
gi|141302|sp|P11620.2|YPT1_SCHPO RecName: Full=GTP-binding protein ypt1
gi|5148|emb|CAA36319.1| ypt1 [Schizosaccharomyces pombe]
gi|6723924|emb|CAB66454.1| GTPase Ypt1 [Schizosaccharomyces pombe]
Length = 203
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 70/132 (53%), Gaps = 1/132 (0%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
D++ ++ + V K E EG+ V+L +WDTAGQE F IT +YYRGA +I +
Sbjct: 31 DTYTESYISTIGVDFKIRTFELEGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDV 90
Query: 108 IDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
D+DSF W +++ E + +LV NK D++D+ VV A + +L + T
Sbjct: 91 TDQDSFNNVKQWLQEIDRYAVEGVNRLLVGNKSDMVDKKVVEYSVAKEFADSLNIPFLET 150
Query: 167 SVKEDINVNSIF 178
S K+ NV F
Sbjct: 151 SAKDSTNVEQAF 162
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 32/50 (64%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
EG+ V+L +WDTAGQE F IT +YYRGA +I + D+DSF W
Sbjct: 53 EGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQDSFNNVKQW 102
>gi|366991981|ref|XP_003675756.1| hypothetical protein NCAS_0C04020 [Naumovozyma castellii CBS 4309]
gi|342301621|emb|CCC69392.1| hypothetical protein NCAS_0C04020 [Naumovozyma castellii CBS 4309]
Length = 210
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/135 (37%), Positives = 70/135 (51%), Gaps = 2/135 (1%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
D F + + + K + G++V+L LWDTAGQE F IT AYYRGA ++ +
Sbjct: 39 DKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQERFRTITTAYYRGAMGIILVYDV 98
Query: 108 IDRDSFEAAHSW-KMKVENECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
D +F W K E+ E +LV NK D +D VV E+ + L++ LG + +
Sbjct: 99 TDERTFSNVKQWFKTVNEHANDEAQLLLVGNKSD-MDTRVVTYEQGESLAKELGLPFIES 157
Query: 167 SVKEDINVNSIFRYL 181
S K D NVN IF L
Sbjct: 158 SAKNDDNVNEIFFTL 172
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 46/91 (50%), Gaps = 8/91 (8%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVSIKRTI 66
G++V+L LWDTAGQE F IT AYYRGA ++ + D +F W +T+
Sbjct: 61 NGKKVKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFSNVKQW------FKTV 114
Query: 67 KECEGEEVRLMLWDTAGQEEFDAITKAYYRG 97
E +E +L+L + + D Y +G
Sbjct: 115 NEHANDEAQLLL--VGNKSDMDTRVVTYEQG 143
>gi|29841146|gb|AAP06159.1| similar to NM_078963 GTP-binding protein rab3A in Drosophila
melanogaster [Schistosoma japonicum]
gi|226480624|emb|CAX73409.1| Rab-protein 8 [Schistosoma japonicum]
Length = 216
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 70/135 (51%), Gaps = 1/135 (0%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
DSF +A + + K + + V+L +WDTAGQE + IT AYYRGA ++ +
Sbjct: 38 DSFTSAFVSTVGIDFKVKTIFRQDKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDI 97
Query: 108 IDRDSFEAAHSWKMKVENEC-GEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
+ +SF A W +++ VLV NK DL+D VV+ + L+ LG
Sbjct: 98 TNEESFNAVQDWVTQIKTYSWDNAQVVLVGNKCDLVDDRVVSVDRGRHLAHQLGLEFFEA 157
Query: 167 SVKEDINVNSIFRYL 181
S KE+INV ++F L
Sbjct: 158 SAKENINVKNVFERL 172
>gi|225709362|gb|ACO10527.1| Ras-related protein Rab-10 [Caligus rogercresseyi]
Length = 198
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 78/159 (49%), Gaps = 5/159 (3%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
D+F + + K E G++++L +WDTAGQE F IT +YYR A ++ +
Sbjct: 32 DTFNTTFISTIGIDFKIKTFELRGKKIKLQIWDTAGQERFHTITTSYYRNAMGIMLVYDV 91
Query: 108 IDRDSFEAAHSWKMKV-ENECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
+ SF+ W + E+ E+ +++ NK D+ D+ V++ E+ + +SR G R + T
Sbjct: 92 TNPKSFDNIAKWLQNIQEHAAEEVDKMILGNKCDMEDKRVISKEKGEAISREYGIRFLET 151
Query: 167 SVKEDINVNSIFRYLTTKCLSELRQQEEEYSINGNGLPP 205
S K ++N+ F L L EE LPP
Sbjct: 152 SAKTNVNIERAFMDLAESILERTPGVEEPRP----SLPP 186
>gi|5146|emb|CAA33192.1| YPT1-related protein [Schizosaccharomyces pombe]
Length = 206
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 70/132 (53%), Gaps = 1/132 (0%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
D++ ++ + V K E EG+ V+L +WDTAGQE F IT +YYRGA +I +
Sbjct: 34 DTYTESYISTIGVDFKIRTFELEGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDV 93
Query: 108 IDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
D+DSF W +++ E + +LV NK D++D+ VV A + +L + T
Sbjct: 94 TDQDSFNNVKQWLQEIDRYAVEGVNRLLVGNKSDMVDKKVVEYSVAKEFADSLNIPFLET 153
Query: 167 SVKEDINVNSIF 178
S K+ NV F
Sbjct: 154 SAKDSTNVEQAF 165
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 32/50 (64%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
EG+ V+L +WDTAGQE F IT +YYRGA +I + D+DSF W
Sbjct: 56 EGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQDSFNNVKQW 105
>gi|50582491|dbj|BAD32700.1| Rab3 [Doryteuthis pealeii]
Length = 220
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/142 (35%), Positives = 72/142 (50%), Gaps = 15/142 (10%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
DSF +A + + K + + V+L +WDTAGQE + IT AYYRGA ++ +
Sbjct: 45 DSFTSAFVSTVGIDFKVKTVFRQDKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDV 104
Query: 108 IDRDSFEAAHSWKMKVENECGEIPT--------VLVQNKIDLLDQSVVAPEEADLLSRAL 159
+ +SF A W C +I T VLV NK DL ++ VV+ E L+ L
Sbjct: 105 TNEESFNAVQDW-------CTQIKTYSWDNAQVVLVGNKCDLEEERVVSTERGKQLADQL 157
Query: 160 GCRLMRTSVKEDINVNSIFRYL 181
G TS KE+INV ++F L
Sbjct: 158 GLEFFETSAKENINVKAVFERL 179
>gi|405964683|gb|EKC30136.1| Ras-related protein Rab-3 [Crassostrea gigas]
Length = 219
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/142 (35%), Positives = 72/142 (50%), Gaps = 15/142 (10%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
DSF +A + + K + + V+L +WDTAGQE + IT AYYRGA ++ +
Sbjct: 44 DSFTSAFVSTVGIDFKVKTVFRQDKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDV 103
Query: 108 IDRDSFEAAHSWKMKVENECGEIPT--------VLVQNKIDLLDQSVVAPEEADLLSRAL 159
+ +SF A W C +I T VLV NK DL D+ VV+ E L+ +
Sbjct: 104 TNEESFNAVMDW-------CTQIKTYSWDNAQVVLVGNKCDLEDERVVSTERGKQLADQI 156
Query: 160 GCRLMRTSVKEDINVNSIFRYL 181
G TS KE+INV ++F L
Sbjct: 157 GLEFFETSAKENINVKAVFERL 178
>gi|359806422|ref|NP_001241498.1| uncharacterized protein LOC100783333 [Glycine max]
gi|255636244|gb|ACU18462.1| unknown [Glycine max]
Length = 202
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 79/159 (49%), Gaps = 6/159 (3%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
DS+ ++ + V K E +G+ ++L +WDTAGQE F IT +YYRGA ++ +
Sbjct: 31 DSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDV 90
Query: 108 IDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
D++SF W +++ E + +LV NK DL VV+ E A + +G M T
Sbjct: 91 TDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMET 150
Query: 167 SVKEDINVNSIFRYLTTKCLSELRQQEEEYSINGNGLPP 205
S K NV F + +E++ + +N N PP
Sbjct: 151 SAKNATNVEQAFMAMA----AEIKNRMASQPVN-NARPP 184
>gi|300175138|emb|CBK20449.2| unnamed protein product [Blastocystis hominis]
Length = 202
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 77/162 (47%), Gaps = 5/162 (3%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
D + + + V K + +G+ V+L +WDTAGQE F IT +YYRGA +I +
Sbjct: 31 DQYSDCYITTIGVDFKIRTVDLDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDV 90
Query: 108 IDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
D DSF +W +++ E + +LV NK DL + VV+ E A + +LG + T
Sbjct: 91 TDLDSFNNVKTWLHEIDRYANENVVKLLVGNKADLTAKKVVSYETAKEFADSLGIEFVET 150
Query: 167 SVKEDINVNSIFRYLTTKCLSELRQQEEEYSINGNGLPPYTI 208
S K NV + F + E+ Q+ G P +
Sbjct: 151 SAKNSTNVETAFMTMA----REIMQKNASVQSGPKGAKPTVV 188
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 32/50 (64%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
+G+ V+L +WDTAGQE F IT +YYRGA +I + D DSF +W
Sbjct: 53 DGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDLDSFNNVKTW 102
>gi|145535806|ref|XP_001453636.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124421358|emb|CAK86239.1| unnamed protein product [Paramecium tetraurelia]
Length = 218
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 73/131 (55%), Gaps = 2/131 (1%)
Query: 60 VSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 119
V K + + + V+L +WDTAGQ+ F IT +YYRGAQ +I F DR+SF W
Sbjct: 50 VDFKIKVFQIDKSTVKLQIWDTAGQDRFRTITSSYYRGAQGIIIVFDVTDRESFNQIRQW 109
Query: 120 KMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIF 178
+++ E + +LV NKID Q V+ +EA+ L+++ + TS K +IN+ + F
Sbjct: 110 MQEIDKFAAESVNKILVGNKID-SSQRRVSTDEAEALAKSYSISYIETSAKTNINIENCF 168
Query: 179 RYLTTKCLSEL 189
+T + + +
Sbjct: 169 SLITRQIIQRV 179
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 32/50 (64%)
Query: 11 VRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 60
V+L +WDTAGQ+ F IT +YYRGAQ +I F DR+SF W ++
Sbjct: 64 VKLQIWDTAGQDRFRTITSSYYRGAQGIIIVFDVTDRESFNQIRQWMQEI 113
>gi|339250788|ref|XP_003374379.1| GTP-binding protein Ypt2 [Trichinella spiralis]
gi|316969320|gb|EFV53438.1| GTP-binding protein Ypt2 [Trichinella spiralis]
Length = 176
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 77/144 (53%), Gaps = 1/144 (0%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
D+F + + K E +G++++L +WDTAGQE F IT +YYRGA ++ +
Sbjct: 32 DAFNTTFISTIGIDFKIKTIELKGKKIKLQIWDTAGQERFHTITMSYYRGAMGIMLVYDI 91
Query: 108 IDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
++ SFE W +E E + +L+ NK D+ ++ +V+ E + ++ G R + T
Sbjct: 92 TNQKSFENITKWLRNIEEHASEDVEKMLLGNKCDIEEKRMVSKERGEEIAGKHGIRFLET 151
Query: 167 SVKEDINVNSIFRYLTTKCLSELR 190
S K IN++ F L L+++R
Sbjct: 152 SAKAKINIDKAFYDLAEAILNKVR 175
>gi|410918321|ref|XP_003972634.1| PREDICTED: ras-related protein Rab-3D-like [Takifugu rubripes]
Length = 221
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 80/160 (50%), Gaps = 3/160 (1%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
DSF +A + + K V+L +WDTAGQE + IT AYYRGA ++ +
Sbjct: 47 DSFTSAFVSTVGIDFKVKTIYRNNTRVKLQIWDTAGQERYRTITTAYYRGAMGFLLMYDI 106
Query: 108 IDRDSFEAAHSWKMKVENEC-GEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
++SF A W +++ G+ VLV NK DL ++ V E+A L+ LG R
Sbjct: 107 TSQESFCAVQDWATQIKTYSWGDAQVVLVGNKADLEEERQVPTEDAQRLATELGFRFFEA 166
Query: 167 SVKEDINVNSIFRYLTTKCLSELRQ--QEEEYSINGNGLP 204
S K++INV +F L ++++ +E +GN P
Sbjct: 167 SAKDNINVKEVFDSLVDAICEKMKEGPNGDETPSSGNKGP 206
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 31/50 (62%)
Query: 11 VRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 60
V+L +WDTAGQE + IT AYYRGA ++ + ++SF A W ++
Sbjct: 73 VKLQIWDTAGQERYRTITTAYYRGAMGFLLMYDITSQESFCAVQDWATQI 122
>gi|1845598|gb|AAB47925.1| Rab3 [Doryteuthis pealeii]
Length = 220
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/142 (35%), Positives = 72/142 (50%), Gaps = 15/142 (10%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
DSF +A + + K + + V+L +WDTAGQE + IT AYYRGA ++ +
Sbjct: 44 DSFTSAFVSTVGIDFKVKTVFRQDKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDV 103
Query: 108 IDRDSFEAAHSWKMKVENECGEIPT--------VLVQNKIDLLDQSVVAPEEADLLSRAL 159
+ +SF A W C +I T VLV NK DL ++ VV+ E L+ L
Sbjct: 104 TNEESFNAVQDW-------CTQIKTYSWDNAQVVLVGNKCDLEEERVVSTERGKQLADQL 156
Query: 160 GCRLMRTSVKEDINVNSIFRYL 181
G TS KE+INV ++F L
Sbjct: 157 GLEFFETSAKENINVKAVFERL 178
>gi|323337771|gb|EGA79014.1| Sec4p [Saccharomyces cerevisiae Vin13]
Length = 186
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 87/176 (49%), Gaps = 8/176 (4%)
Query: 11 VRLMLWDTAGQEEFDAITKAYYRG----AQACVITFSTIDRDSFEAAHSWKMKVSIKRTI 66
+R + + + +D+I K G ++C++ D F + + + K
Sbjct: 4 LRTVSASSGNGKSYDSIMKILLIGDSGVGKSCLLV--RFVEDKFNPSFITTIGIDFKIKT 61
Query: 67 KECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW-KMKVEN 125
+ G++V+L LWDTAGQE F IT AYYRGA ++ + D +F W K E+
Sbjct: 62 VDINGKKVKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEH 121
Query: 126 ECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYL 181
E +LV NK D ++ VV ++ + L++ LG + +S K D NVN IF +L
Sbjct: 122 ANDEAQLLLVGNKSD-METRVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFHL 176
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 40/73 (54%), Gaps = 6/73 (8%)
Query: 6 CEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVSIKRT 65
G++V+L LWDTAGQE F IT AYYRGA ++ + D +F W +T
Sbjct: 64 INGKKVKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQW------FKT 117
Query: 66 IKECEGEEVRLML 78
+ E +E +L+L
Sbjct: 118 VNEHANDEAQLLL 130
>gi|296084653|emb|CBI25776.3| unnamed protein product [Vitis vinifera]
Length = 178
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/152 (32%), Positives = 76/152 (50%), Gaps = 6/152 (3%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
D F+A + + + E +RL LWDTAGQE F ++ +Y R + VI +
Sbjct: 3 DKFDATYQATIGIDFLSKTMYLEDRTIRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDV 62
Query: 108 IDRDSFEAAHSWKMKVENECG-EIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
+R SF W +V E G ++ VLV NK DL+D+ V+ EE D SR G + T
Sbjct: 63 GNRQSFLNTSKWIEEVRTERGTDVIIVLVGNKTDLVDKRQVSIEEGDTKSRDFGVMFIET 122
Query: 167 SVKEDINVNSIFRYLTT-----KCLSELRQQE 193
S K N+ +FR + + + LS +Q++
Sbjct: 123 SAKAGFNIKPLFRKIASALPGMETLSSTKQED 154
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 31/58 (53%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVSIKR 64
E +RL LWDTAGQE F ++ +Y R + VI + +R SF W +V +R
Sbjct: 25 EDRTIRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDVGNRQSFLNTSKWIEEVRTER 82
>gi|353244337|emb|CCA75747.1| related to YPT-1 GTP-binding protein ypt1 [Piriformospora indica
DSM 11827]
Length = 227
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 93/201 (46%), Gaps = 14/201 (6%)
Query: 9 EEVRLMLWDTAGQEEFDAITKAYYRG----AQACVITFSTIDRDSFEAAHSWKMKVSIKR 64
E + L+ T E+D + K G ++C++ D++ ++ + V K
Sbjct: 14 EPLHLLATLTMHASEYDYLFKLLLIGDSGVGKSCLLL--RFADDTYTESYISTIGVDFKI 71
Query: 65 TIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVE 124
E EG+ V+L +WDTAGQE F IT +YYRGA ++ + D D+F W +++
Sbjct: 72 RTIELEGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDTDTFTNVKQWLQEID 131
Query: 125 NECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLTT 183
E + +LV NK DL + VV A + LG + TS K NV F
Sbjct: 132 RYASEGVNKLLVGNKSDLTSKKVVEYTVAKEFADQLGIPFLETSAKNATNVEQAF----- 186
Query: 184 KCLSELRQQEEEYSINGNGLP 204
L+ +Q +++ +G G P
Sbjct: 187 --LTMAKQIKDKMGASGTGGP 205
Score = 60.1 bits (144), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 31/50 (62%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
EG+ V+L +WDTAGQE F IT +YYRGA ++ + D D+F W
Sbjct: 77 EGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDTDTFTNVKQW 126
>gi|260781612|ref|XP_002585899.1| hypothetical protein BRAFLDRAFT_62895 [Branchiostoma floridae]
gi|260812193|ref|XP_002600805.1| hypothetical protein BRAFLDRAFT_95095 [Branchiostoma floridae]
gi|229270964|gb|EEN41910.1| hypothetical protein BRAFLDRAFT_62895 [Branchiostoma floridae]
gi|229286095|gb|EEN56817.1| hypothetical protein BRAFLDRAFT_95095 [Branchiostoma floridae]
Length = 206
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 73/143 (51%), Gaps = 1/143 (0%)
Query: 50 FEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTID 109
F + V + +G++V+L +WDTAGQE F +IT++YYR A A ++ +
Sbjct: 32 FPPGQGATIGVDFMIKTVDVDGDKVKLQIWDTAGQERFRSITQSYYRSAHALILVYDVTS 91
Query: 110 RDSFEAAHSWKMKVENECG-EIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSV 168
R+SF+ W ++E ++ TVLV NKIDL Q V PE ++A + S
Sbjct: 92 RESFDCLPEWLKEIEQYANQQVITVLVGNKIDLTSQREVPPETGLQFAQANNMAFLEASA 151
Query: 169 KEDINVNSIFRYLTTKCLSELRQ 191
KE NV ++F L + R+
Sbjct: 152 KEAENVETVFMDLARELTKNARK 174
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 35/50 (70%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
+G++V+L +WDTAGQE F +IT++YYR A A ++ + R+SF+ W
Sbjct: 52 DGDKVKLQIWDTAGQERFRSITQSYYRSAHALILVYDVTSRESFDCLPEW 101
>gi|47217979|emb|CAG02262.1| unnamed protein product [Tetraodon nigroviridis]
Length = 206
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 70/146 (47%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
+SF ++ + V K + GE V+L +WDTAGQE F IT YYR +I +
Sbjct: 29 NSFSGSYITTIGVDFKIRTVDIGGERVKLQIWDTAGQERFRTITSTYYRNTHGVIIVYDV 88
Query: 108 IDRDSFEAAHSWKMKVENECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTS 167
+ +SF W ++ C + +LV NK D + V ++A +G R+ TS
Sbjct: 89 TNPESFVNVKRWLNEISQNCDSVCKILVGNKNDDPAKKRVDSQDAVRFGETVGVRVFETS 148
Query: 168 VKEDINVNSIFRYLTTKCLSELRQQE 193
KE+INV +F T L +Q +
Sbjct: 149 AKENINVEEMFMAFTHMVLRAKKQSQ 174
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 30/54 (55%)
Query: 8 GEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVS 61
GE V+L +WDTAGQE F IT YYR +I + + +SF W ++S
Sbjct: 52 GERVKLQIWDTAGQERFRTITSTYYRNTHGVIIVYDVTNPESFVNVKRWLNEIS 105
>gi|431918954|gb|ELK17821.1| Ras-related protein Rab-3D [Pteropus alecto]
Length = 219
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 77/160 (48%), Gaps = 2/160 (1%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
DSF A + + K + ++L +WDTAGQE + IT AYYRGA ++ +
Sbjct: 45 DSFTPAFVSTVGIDFKVKTVYRHDKRIKLQIWDTAGQERYRTITTAYYRGAMGFLLMYDV 104
Query: 108 IDRDSFEAAHSWKMKVENEC-GEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
+++SF A W +++ +LV NK DL D+ VV E+ L+ LG
Sbjct: 105 ANQESFTAVQDWATQIKTYSWDNAQVILVGNKCDLEDERVVPAEDGRRLADDLGFEFFEA 164
Query: 167 SVKEDINVNSIFRYLTTKCLSELRQQEEEYSING-NGLPP 205
S KE+INV +F L ++ + E S G NG P
Sbjct: 165 SAKENINVKQVFERLVDVICEKMNESLEPSSSPGSNGKGP 204
>gi|388520849|gb|AFK48486.1| unknown [Lotus japonicus]
Length = 202
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 79/159 (49%), Gaps = 6/159 (3%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
DS+ ++ + V K E +G+ ++L +WDTAGQE F IT +YYRGA ++ +
Sbjct: 31 DSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDV 90
Query: 108 IDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
D++SF W +++ E + +LV NK DL VV+ E A + +G M T
Sbjct: 91 TDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMET 150
Query: 167 SVKEDINVNSIFRYLTTKCLSELRQQEEEYSINGNGLPP 205
S K NV F + +E++ + +N N PP
Sbjct: 151 SAKNATNVEQAFMAMA----AEIKNRMASQPVN-NARPP 184
>gi|340509111|gb|EGR34677.1| Ras family protein, putative [Ichthyophthirius multifiliis]
Length = 202
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 88/175 (50%), Gaps = 9/175 (5%)
Query: 21 QEEFDAITKAYYRG----AQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRL 76
++++DA+ K G + CV+ +F H + + K +E +G+ V+L
Sbjct: 5 KQDYDAVLKFLVIGDSGVGKTCVLLNYC--EGTFTNVHLTTIGIDYKLKQEEIDGKRVKL 62
Query: 77 MLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGE--IPTVL 134
+WDTAGQE F IT YY+GA V+ +S D +SF+ W MK NE + + ++
Sbjct: 63 QIWDTAGQERFKTITVNYYKGAMGIVLAYSVTDPNSFKNIADW-MKQINEHADANVKKII 121
Query: 135 VQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSEL 189
+ NK D+ D V+ +E + L+ G + TS K+ N+ F+ + + L +
Sbjct: 122 IANKCDMKDDRKVSQKEGEELAEKYGVKYFETSAKDGQNIGEAFKSIAKQALDNI 176
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 35/55 (63%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVS 61
+G+ V+L +WDTAGQE F IT YY+GA V+ +S D +SF+ W +++
Sbjct: 56 DGKRVKLQIWDTAGQERFKTITVNYYKGAMGIVLAYSVTDPNSFKNIADWMKQIN 110
>gi|213511948|ref|NP_001133667.1| Ras-related protein Rab-3D [Salmo salar]
gi|209154872|gb|ACI33668.1| Ras-related protein Rab-3D [Salmo salar]
Length = 224
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 81/159 (50%), Gaps = 8/159 (5%)
Query: 48 DSFEAAHSWKMKVSIK-RTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFS 106
DSF +A + + K +T+ E + V+L +WDTAGQE + IT AYYRGA ++ +
Sbjct: 51 DSFTSAFVSTVGIDFKVKTVYRNE-KRVKLQIWDTAGQERYRTITTAYYRGAMGFLLMYD 109
Query: 107 TIDRDSFEAAHSWKMKVENEC-GEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMR 165
++DSF A W +++ +LV NK DL D +V E+ L+ LG +
Sbjct: 110 ITNQDSFYAVQDWATQIKTYSWDNAQVILVGNKADLEDDRLVPAEDGQRLADELGFQFFE 169
Query: 166 TSVKEDINVNSIFRYLTTKCLSELRQQEEEYSINGNGLP 204
S K++INV +F L ++ + S+NG P
Sbjct: 170 ASAKDNINVKQVFERLVDVICEKMSE-----SVNGEPSP 203
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 33/52 (63%)
Query: 9 EEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 60
+ V+L +WDTAGQE + IT AYYRGA ++ + ++DSF A W ++
Sbjct: 75 KRVKLQIWDTAGQERYRTITTAYYRGAMGFLLMYDITNQDSFYAVQDWATQI 126
>gi|206598099|gb|ACI15910.1| Rab1 [Bodo saltans]
Length = 205
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 73/146 (50%), Gaps = 1/146 (0%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
DS+ ++ + V K +G+ ++L +WDTAGQE F IT +YYRGA +I +
Sbjct: 31 DSYTESYISTIGVDFKIRTLNLDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDV 90
Query: 108 IDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
D +SF +W +++ E + +LV NK DL+ + V P A + +LG + T
Sbjct: 91 TDVESFNNVKTWLSEIDKYASENVNKLLVGNKSDLIAKKAVDPGMAKEFADSLGIPFLET 150
Query: 167 SVKEDINVNSIFRYLTTKCLSELRQQ 192
S K NV F + T S + Q
Sbjct: 151 SAKNSTNVEEAFIRMATDIKSRVAAQ 176
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 32/50 (64%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
+G+ ++L +WDTAGQE F IT +YYRGA +I + D +SF +W
Sbjct: 53 DGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDVESFNNVKTW 102
>gi|55729263|emb|CAH91367.1| hypothetical protein [Pongo abelii]
Length = 200
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 87/178 (48%), Gaps = 7/178 (3%)
Query: 21 QEEFDAITKAYYRG----AQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRL 76
+E +D + K G + CV+ F D D+F + + K E +G++++L
Sbjct: 3 KETYDLLFKLLLIGDSGVGKTCVL-FRFSD-DAFNTTFISTIGIDFKIKTVELQGKKIKL 60
Query: 77 MLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGE-IPTVLV 135
+WDTAGQE F IT +YYRGA ++ + + SFE W ++ E + +L+
Sbjct: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLL 120
Query: 136 QNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSELRQQE 193
NK D+ D+ VV + + ++R G R TS K +IN+ F L L + +E
Sbjct: 121 GNKCDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVKE 178
>gi|388519757|gb|AFK47940.1| unknown [Lotus japonicus]
Length = 191
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/133 (35%), Positives = 67/133 (50%), Gaps = 1/133 (0%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
D F+ + + + E VRL LWDTAGQE F ++ +Y R + VI +
Sbjct: 32 DKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDV 91
Query: 108 IDRDSFEAAHSWKMKVENECG-EIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
+R SF + W +V E G ++ VLV NK DL+D+ V+ EE D SR G + T
Sbjct: 92 ANRQSFLNTNKWVEEVRTERGSDVIIVLVGNKTDLVDKRQVSIEEGDAKSREFGIMFIET 151
Query: 167 SVKEDINVNSIFR 179
S K N+ +FR
Sbjct: 152 SAKAGFNIKPLFR 164
Score = 49.7 bits (117), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 32/59 (54%)
Query: 6 CEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVSIKR 64
E VRL LWDTAGQE F ++ +Y R + VI + +R SF + W +V +R
Sbjct: 53 LEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTNKWVEEVRTER 111
>gi|385304532|gb|EIF48546.1| gtp-binding protein sas1 [Dekkera bruxellensis AWRI1499]
Length = 207
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 77/157 (49%), Gaps = 3/157 (1%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
D F + + + K + G+ ++L +WDTAGQE F IT AYYRGA +I +
Sbjct: 35 DKFNPSFITTIGIDFKIKTIDINGKRIKLQVWDTAGQERFRTITTAYYRGAMGIIIVYDV 94
Query: 108 IDRDSFEAAHSWKMKVENECGEIPTV-LVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
D +SFE+ W V + + LV NK D + V+ ++ +LL++ LG M
Sbjct: 95 CDENSFESVKKWYQTVNQHAKDDAQLFLVGNKCDDEESRQVSTKQGELLAQELGIPFMEA 154
Query: 167 SVKEDINVNSIFRYLTTKCLSELRQQE--EEYSINGN 201
S K +NV+ +F L L + +E E S GN
Sbjct: 155 SAKSSVNVSEVFYKLAGLILEKTSDEEAASEQSQKGN 191
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 34/54 (62%)
Query: 8 GEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVS 61
G+ ++L +WDTAGQE F IT AYYRGA +I + D +SFE+ W V+
Sbjct: 58 GKRIKLQVWDTAGQERFRTITTAYYRGAMGIIIVYDVCDENSFESVKKWYQTVN 111
>gi|383864073|ref|XP_003707504.1| PREDICTED: ras-related protein Rab-8A-like isoform 1 [Megachile
rotundata]
Length = 209
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 81/161 (50%), Gaps = 3/161 (1%)
Query: 35 AQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAY 94
+ CV+ D+F + + K E +G++++L +WDTAGQE F IT AY
Sbjct: 20 GKTCVLF--RFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDTAGQERFRTITTAY 77
Query: 95 YRGAQACVITFSTIDRDSFEAAHSWKMKV-ENECGEIPTVLVQNKIDLLDQSVVAPEEAD 153
YRGA ++ + + SFE +W + EN ++ +L+ NK +L ++ V+ E +
Sbjct: 78 YRGAMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMLLGNKCELTEKRQVSKERGE 137
Query: 154 LLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSELRQQEE 194
L+ G + M TS K INV F L +++ ++ E
Sbjct: 138 QLAVEYGIKFMETSAKSSINVEEAFYTLARDIKAKMEKKLE 178
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 41/72 (56%), Gaps = 6/72 (8%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVSIKRTI 66
+G++++L +WDTAGQE F IT AYYRGA ++ + + SFE +W R I
Sbjct: 53 DGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDVTNEKSFENIKNW------IRNI 106
Query: 67 KECEGEEVRLML 78
+E +V ML
Sbjct: 107 EENASADVEKML 118
>gi|340726838|ref|XP_003401759.1| PREDICTED: ras-related protein Rab-8A-like isoform 1 [Bombus
terrestris]
gi|350421632|ref|XP_003492906.1| PREDICTED: ras-related protein Rab-8A-like isoform 1 [Bombus
impatiens]
Length = 209
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 81/161 (50%), Gaps = 3/161 (1%)
Query: 35 AQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAY 94
+ CV+ D+F + + K E +G++++L +WDTAGQE F IT AY
Sbjct: 20 GKTCVLF--RFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDTAGQERFRTITTAY 77
Query: 95 YRGAQACVITFSTIDRDSFEAAHSWKMKV-ENECGEIPTVLVQNKIDLLDQSVVAPEEAD 153
YRGA ++ + + SFE +W + EN ++ +L+ NK +L ++ V+ E +
Sbjct: 78 YRGAMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMLLGNKCELTEKRQVSKERGE 137
Query: 154 LLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSELRQQEE 194
L+ G + M TS K INV F L +++ ++ E
Sbjct: 138 QLAVEYGIKFMETSAKSSINVEEAFYTLARDIKAKMEKKLE 178
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 41/72 (56%), Gaps = 6/72 (8%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVSIKRTI 66
+G++++L +WDTAGQE F IT AYYRGA ++ + + SFE +W R I
Sbjct: 53 DGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDVTNEKSFENIKNW------IRNI 106
Query: 67 KECEGEEVRLML 78
+E +V ML
Sbjct: 107 EENASADVEKML 118
>gi|348522032|ref|XP_003448530.1| PREDICTED: ras-related protein Rab-8A-like [Oreochromis niloticus]
Length = 206
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 91/170 (53%), Gaps = 7/170 (4%)
Query: 35 AQACVI-TFSTIDRDSFEAAHSWKMKVSIK-RTIKECEGEEVRLMLWDTAGQEEFDAITK 92
+ CV+ FS D+F + + + K RTI E +G++++L +WDTAGQE F IT
Sbjct: 20 GKTCVLFRFS---EDAFNSTFISTIGIDFKIRTI-ELDGKKIKLQIWDTAGQERFRTITT 75
Query: 93 AYYRGAQACVITFSTIDRDSFEAAHSWKMKV-ENECGEIPTVLVQNKIDLLDQSVVAPEE 151
AYYRGA ++ + + SFE +W + E+ ++ +++ NK D+ D+ V+ E
Sbjct: 76 AYYRGAMGIMLVYDITNEKSFENIKNWIRNIEEHASADVEKMVLGNKCDINDKRQVSKEM 135
Query: 152 ADLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSELRQQEEEYSINGN 201
+ L+ G + M TS K +INV + F L S++ + E + G+
Sbjct: 136 GEKLALEYGIKFMETSAKSNINVENAFLTLARDIKSKMDTKLEGNTPQGS 185
>gi|156547415|ref|XP_001604485.1| PREDICTED: ras-related protein Rab-21-like [Nasonia vitripennis]
Length = 222
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 87/172 (50%), Gaps = 4/172 (2%)
Query: 35 AQACVITFSTIDR---DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAIT 91
+ CV S + R D F H ++ S + G+ V L +WDTAGQE+F A+
Sbjct: 17 GEGCVGKTSVVLRYVEDKFNDKHISTLQASFFKKKLNINGKRVNLAIWDTAGQEKFHALG 76
Query: 92 KAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENECG-EIPTVLVQNKIDLLDQSVVAPE 150
YYR + ++ + D ++F+ +W +++ G +I + NK+DL + V E
Sbjct: 77 PIYYRMSNGAILVYDITDEETFKKVKNWVKELKKMLGSDICLAIAGNKVDLEKERNVTIE 136
Query: 151 EADLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSELRQQEEEYSINGNG 202
EA+ ++ +G TS K+++NV +F LT + + QQE++ ++ N
Sbjct: 137 EAEEYAKQVGAVHFHTSAKQNLNVEEMFLDLTRRMMQHADQQEQKSTLTRNN 188
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 30/49 (61%)
Query: 8 GEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
G+ V L +WDTAGQE+F A+ YYR + ++ + D ++F+ +W
Sbjct: 56 GKRVNLAIWDTAGQEKFHALGPIYYRMSNGAILVYDITDEETFKKVKNW 104
>gi|432871908|ref|XP_004072037.1| PREDICTED: ras-related protein Rab-3D-like [Oryzias latipes]
Length = 220
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 82/156 (52%), Gaps = 3/156 (1%)
Query: 48 DSFEAAHSWKMKVSIK-RTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFS 106
DSF A+ + + K +T+ E + ++L +WDTAGQE + +IT AYYRGA ++ +
Sbjct: 48 DSFNPAYVSTVGIDFKVKTVFRNE-KRIKLQIWDTAGQERYRSITTAYYRGADGFLLMYD 106
Query: 107 TIDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMR 165
+++SF A W +V++ + +LV NK D+ D ++ E+ L+ G
Sbjct: 107 ITNQESFNAVRDWATQVQHYSSKNAQVILVGNKCDMEDDRLITREDGQRLADERGFLFFE 166
Query: 166 TSVKEDINVNSIFRYLTTKCLSELRQQEEEYSINGN 201
S KE+INV +F +L ++ + +IN N
Sbjct: 167 ASAKENINVKQVFEHLVDVICEQMNTSTDGNAINSN 202
>gi|356512701|ref|XP_003525055.1| PREDICTED: ras-related protein RABH1e-like [Glycine max]
Length = 207
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/152 (32%), Positives = 75/152 (49%), Gaps = 6/152 (3%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
D F+ + + + E VRL LWDTAGQE F ++ +Y R + VI +
Sbjct: 32 DKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDV 91
Query: 108 IDRDSFEAAHSWKMKVENECG-EIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
+R SF + W +V E G ++ VLV NK DL+D+ V+ EE D SR G + T
Sbjct: 92 ANRQSFLNTNKWVEEVRTERGSDVIIVLVGNKTDLVDKRQVSIEEGDAKSREFGIMFIET 151
Query: 167 SVKEDINVNSIFRYLTT-----KCLSELRQQE 193
S K N+ +FR + + LS +Q++
Sbjct: 152 SAKAGFNIKPLFRKIAAALPGMETLSSTKQED 183
Score = 49.7 bits (117), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 32/58 (55%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVSIKR 64
E VRL LWDTAGQE F ++ +Y R + VI + +R SF + W +V +R
Sbjct: 54 EDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTNKWVEEVRTER 111
>gi|157428086|ref|NP_001098951.1| ras-related protein Rab-8A [Bos taurus]
gi|240849277|ref|NP_001155332.1| ras-related protein Rab-8A [Ovis aries]
gi|158513560|sp|A4FV54.1|RAB8A_BOVIN RecName: Full=Ras-related protein Rab-8A; Flags: Precursor
gi|133778133|gb|AAI23756.1| RAB8A protein [Bos taurus]
gi|238566720|gb|ACR46623.1| RAB8A [Ovis aries]
gi|296486043|tpg|DAA28156.1| TPA: ras-related protein Rab-8A [Bos taurus]
gi|385139591|gb|AFI41879.1| RAS oncogene protein [Capra hircus]
gi|440901306|gb|ELR52280.1| Ras-related protein Rab-8A [Bos grunniens mutus]
Length = 207
Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 82/155 (52%), Gaps = 1/155 (0%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
D+F + + + K E +G+ ++L +WDTAGQE F IT AYYRGA ++ +
Sbjct: 31 DAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDI 90
Query: 108 IDRDSFEAAHSWKMKV-ENECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
+ SF+ +W + E+ ++ +++ NK D+ D+ V+ E + L+ G + M T
Sbjct: 91 TNEKSFDNIRNWIRNIEEHASADVEKMILGNKCDVNDKRQVSKERGEKLALDYGIKFMET 150
Query: 167 SVKEDINVNSIFRYLTTKCLSELRQQEEEYSINGN 201
S K +INV + F L +++ ++ E S G+
Sbjct: 151 SAKANINVENAFYTLARDIKAKMDKKLEGNSPQGS 185
>gi|71895051|ref|NP_001026268.1| ras-related protein Rab-10 [Gallus gallus]
gi|82233742|sp|Q5ZIT5.1|RAB10_CHICK RecName: Full=Ras-related protein Rab-10
gi|53134733|emb|CAG32358.1| hypothetical protein RCJMB04_23k10 [Gallus gallus]
Length = 200
Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 81/160 (50%), Gaps = 3/160 (1%)
Query: 35 AQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAY 94
+ CV+ F D D+F + + +K E +G++++L +WDTAGQE F IT +Y
Sbjct: 21 GKTCVL-FRFSD-DAFNTTFISTIGIDLKIKTVELQGKKIKLQIWDTAGQERFHTITTSY 78
Query: 95 YRGAQACVITFSTIDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEAD 153
YRGA ++ + + SFE W ++ E + +L+ NK D+ D+ VV + +
Sbjct: 79 YRGAMGIMLVYDITNAKSFENISKWLRNIDEHANEDVERMLLGNKCDMEDKRVVPKAKGE 138
Query: 154 LLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSELRQQE 193
++R G R TS K +IN+ F L L + +E
Sbjct: 139 QIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVKE 178
>gi|387017924|gb|AFJ51080.1| ras-related protein Rab-10-like [Crotalus adamanteus]
Length = 189
Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 79/156 (50%), Gaps = 3/156 (1%)
Query: 35 AQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAY 94
+ CV+ F D D+F + + K E +G++++L +WDTAGQE F IT +Y
Sbjct: 21 GKTCVL-FRFSD-DAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQERFHTITTSY 78
Query: 95 YRGAQACVITFSTIDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEAD 153
YRGA ++ + + SFE W ++ E + +L+ NK D+ D+ VV + +
Sbjct: 79 YRGAMGIMLVYDITNAKSFENISKWLRNIDEHANEDVERMLLGNKCDMDDKRVVPKAKGE 138
Query: 154 LLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSEL 189
++R G R TS K +IN+ F L L ++
Sbjct: 139 QIAREHGIRFFETSAKANINIEKAFLTLAEDILRKV 174
>gi|366997238|ref|XP_003678381.1| hypothetical protein NCAS_0J00630 [Naumovozyma castellii CBS 4309]
gi|342304253|emb|CCC72042.1| hypothetical protein NCAS_0J00630 [Naumovozyma castellii CBS 4309]
Length = 218
Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 69/135 (51%), Gaps = 2/135 (1%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
+ F + + + K + +G +++L LWDTAGQE F IT AYYRGA ++ +
Sbjct: 49 NKFNPSFITTIGIDFKIKTLDIQGRKIKLQLWDTAGQERFRTITTAYYRGAMGIILVYDV 108
Query: 108 IDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
D +F+ W V E + +LV NK DL ++ V E+ + L+R LG M
Sbjct: 109 TDERTFQNIRQWYSTVNEHANEQVQLLLVGNKSDLGNRQVT-KEQGEELARELGLPFMEA 167
Query: 167 SVKEDINVNSIFRYL 181
S K D NVN +F L
Sbjct: 168 SAKNDDNVNDLFLQL 182
Score = 62.8 bits (151), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 41/72 (56%), Gaps = 6/72 (8%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVSIKRTI 66
+G +++L LWDTAGQE F IT AYYRGA ++ + D +F+ W T+
Sbjct: 71 QGRKIKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFQNIRQW------YSTV 124
Query: 67 KECEGEEVRLML 78
E E+V+L+L
Sbjct: 125 NEHANEQVQLLL 136
>gi|76779772|gb|AAI06309.1| Rab3d protein [Xenopus laevis]
Length = 217
Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 82/162 (50%), Gaps = 3/162 (1%)
Query: 48 DSFEAAHSWKMKVSIK-RTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFS 106
DSF +A + + K +T+ E + V+L +WDTAGQE + IT AYYRGA ++ +
Sbjct: 45 DSFTSAFVSTVGIDFKVKTVYRNE-KRVKLQIWDTAGQERYRTITTAYYRGAMGFLLMYD 103
Query: 107 TIDRDSFEAAHSWKMKVENECGEIPTV-LVQNKIDLLDQSVVAPEEADLLSRALGCRLMR 165
+ +SF A W +++ + V LV NK DL D V+A E+ L+ LG
Sbjct: 104 ISNLESFNAVQDWATQIKTYSWDNAQVLLVGNKCDLEDDRVIAAEDGRKLAEELGFEFFE 163
Query: 166 TSVKEDINVNSIFRYLTTKCLSELRQQEEEYSINGNGLPPYT 207
S K++INV +F L ++ + E + G+G T
Sbjct: 164 ASAKDNINVKQVFERLVDIICEKMNESLENGPVPGSGTAQLT 205
>gi|50308977|ref|XP_454494.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49643629|emb|CAG99581.1| KLLA0E12079p [Kluyveromyces lactis]
Length = 214
Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 85/176 (48%), Gaps = 8/176 (4%)
Query: 11 VRLMLWDTAGQEEFDAITKAYYRG----AQACVITFSTIDRDSFEAAHSWKMKVSIKRTI 66
+R + + + + +D++ K G ++C++ D F + + K
Sbjct: 4 LRTVSANGSTNKNYDSVMKILLLGDSGVGKSCLLV--RFVEDKFTPTFITTIGIDFKIKT 61
Query: 67 KECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENE 126
+ G+ V+L LWDTAGQE F IT AYYRGA V+ + D +FE W V
Sbjct: 62 VDINGKRVKLQLWDTAGQERFRTITTAYYRGAMGIVLIYDVTDERTFENIRQWFSTVNQH 121
Query: 127 CGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYL 181
E + +LV NK D +D V+ E+ + L++ LG + S K+D NV+ IF L
Sbjct: 122 ASEDVVMLLVGNKKD-MDTRTVSYEQGEALAKELGIPFIEASAKDDTNVSEIFFTL 176
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 48/90 (53%), Gaps = 8/90 (8%)
Query: 8 GEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVSIKRTIK 67
G+ V+L LWDTAGQE F IT AYYRGA V+ + D +FE W T+
Sbjct: 66 GKRVKLQLWDTAGQERFRTITTAYYRGAMGIVLIYDVTDERTFENIRQW------FSTVN 119
Query: 68 ECEGEEVRLMLWDTAGQEEFDAITKAYYRG 97
+ E+V ++L +++ D T +Y +G
Sbjct: 120 QHASEDVVMLL--VGNKKDMDTRTVSYEQG 147
>gi|255539911|ref|XP_002511020.1| protein with unknown function [Ricinus communis]
gi|223550135|gb|EEF51622.1| protein with unknown function [Ricinus communis]
Length = 203
Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 75/159 (47%), Gaps = 5/159 (3%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
DS+ ++ + V K E +G+ ++L +WDTAGQE F IT +YYRGA +I +
Sbjct: 31 DSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDV 90
Query: 108 IDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
D++SF W +++ E + +LV NK DL VV+ E A + +G M T
Sbjct: 91 TDQESFNNVKQWLNEIDRYASENVNKLLVGNKSDLTANKVVSYETAKAFADEIGIPFMET 150
Query: 167 SVKEDINVNSIFRYLTTKCLSELRQQEEEYSINGNGLPP 205
S K NV F + + + Q N PP
Sbjct: 151 SAKNATNVEQAFMAMAADIKNRMASQPAA----NNARPP 185
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 32/50 (64%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
+G+ ++L +WDTAGQE F IT +YYRGA +I + D++SF W
Sbjct: 53 DGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQW 102
>gi|194206583|ref|XP_001918101.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein Rab-8B-like
[Equus caballus]
Length = 207
Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 79/142 (55%), Gaps = 2/142 (1%)
Query: 64 RTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 123
RTI E +G++++L +WDTAGQE F IT AYYRGA ++ + + SF+ +W +
Sbjct: 48 RTI-ELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNI 106
Query: 124 -ENECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLT 182
E+ ++ +++ NK D+ D+ V+ E + L+ G + + TS K NV F L
Sbjct: 107 EEHASSDVERMILGNKCDMNDKRQVSKERGEKLAIDYGIKFLETSAKSSTNVEEAFFTLA 166
Query: 183 TKCLSELRQQEEEYSINGNGLP 204
+++L ++ + + +G G P
Sbjct: 167 RDIMTKLNRKMNDSNSSGAGGP 188
>gi|440790218|gb|ELR11501.1| Ras subfamily protein [Acanthamoeba castellanii str. Neff]
Length = 237
Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 46/113 (40%), Positives = 60/113 (53%), Gaps = 1/113 (0%)
Query: 70 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENECG- 128
EG +RL +WDTAGQE F ITKAYYRGAQ + + D SF+A W ++
Sbjct: 74 EGARLRLQIWDTAGQERFRTITKAYYRGAQGVALVYDVTDAKSFQAISGWAQSLDQHASR 133
Query: 129 EIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYL 181
++ VLV NK D D+ V++ EE L+ G TS K I V +F L
Sbjct: 134 QVCKVLVANKCDRADRRVISTEEGQKLAADNGFHYFETSAKTGIAVEDMFMKL 186
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 32/50 (64%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
EG +RL +WDTAGQE F ITKAYYRGAQ + + D SF+A W
Sbjct: 74 EGARLRLQIWDTAGQERFRTITKAYYRGAQGVALVYDVTDAKSFQAISGW 123
>gi|145535548|ref|XP_001453507.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74833747|emb|CAI39343.1| rab_B22 [Paramecium tetraurelia]
gi|124421229|emb|CAK86110.1| unnamed protein product [Paramecium tetraurelia]
Length = 205
Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 89/184 (48%), Gaps = 9/184 (4%)
Query: 21 QEEFDAITKAYYRGAQAC-----VITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVR 75
Q+E+D + K G A ++ F+ + F + + V K + G+ V+
Sbjct: 4 QQEYDYLFKILLIGNSAVGKSSLLLRFAD---NVFNESFLPTIGVDFKIRTFDLNGKTVK 60
Query: 76 LMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGE-IPTVL 134
L +WDTAGQE F IT +YY+GA ++ + D+ SF+ +W +VE E + VL
Sbjct: 61 LQIWDTAGQERFKTITNSYYKGAHGIILVYDVTDKQSFKDVENWLAEVEKYANENVVRVL 120
Query: 135 VQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSELRQQEE 194
V NK+DL + V EE L+ +L R + TS K NV F L + +++ + E
Sbjct: 121 VGNKVDLESKREVTFEEGKELADSLNIRFIETSAKNSSNVEKAFITLANEIKAKVAKGSE 180
Query: 195 EYSI 198
I
Sbjct: 181 AVPI 184
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 34/53 (64%)
Query: 8 GEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 60
G+ V+L +WDTAGQE F IT +YY+GA ++ + D+ SF+ +W +V
Sbjct: 56 GKTVKLQIWDTAGQERFKTITNSYYKGAHGIILVYDVTDKQSFKDVENWLAEV 108
>gi|354467588|ref|XP_003496251.1| PREDICTED: ras-related protein Rab-3C-like [Cricetulus griseus]
Length = 228
Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 90/183 (49%), Gaps = 7/183 (3%)
Query: 4 RICEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVIT---FSTIDRDSFEAAHSWKMKV 60
++ ++ R D++ + FD + K G + T F D DSF +A + +
Sbjct: 8 QMASAQDARFGQKDSSSDQNFDYMFKLLIIGNSSVGKTSFLFRYAD-DSFTSAFVSTVGI 66
Query: 61 SIK-RTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 119
K +T+ + E + ++L +WDTAGQE + IT AYYRGA ++ + + +SF A W
Sbjct: 67 DFKVKTVFKNE-KRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDW 125
Query: 120 KMKVENEC-GEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIF 178
+++ +LV NK D+ D+ +++ E L LG TS K++INV F
Sbjct: 126 STQIKTYSWDNAQVILVGNKCDMEDERIISTERGQHLGEQLGFEFFETSAKDNINVKQTF 185
Query: 179 RYL 181
L
Sbjct: 186 ERL 188
>gi|296213405|ref|XP_002753255.1| PREDICTED: ras-related protein Rab-8B isoform 1 [Callithrix
jacchus]
Length = 207
Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 84/159 (52%), Gaps = 3/159 (1%)
Query: 48 DSFEAAHSWKMKVSIK-RTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFS 106
D+F + + K RTI E +G++++L +WDTAGQE F IT AYYRGA ++ +
Sbjct: 31 DAFNTTFISTIGIDFKIRTI-ELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYD 89
Query: 107 TIDRDSFEAAHSWKMKV-ENECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMR 165
+ SF+ +W + E+ ++ +++ NK D+ D+ V+ E + L+ G + +
Sbjct: 90 ITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCDMNDKRQVSKERGEKLAIDYGIKFLE 149
Query: 166 TSVKEDINVNSIFRYLTTKCLSELRQQEEEYSINGNGLP 204
TS K NV F L +++L ++ + + G G P
Sbjct: 150 TSAKSSTNVEEAFFTLARDIMTKLNRKMNDSNSAGAGGP 188
>gi|50550177|ref|XP_502561.1| YALI0D08162p [Yarrowia lipolytica]
gi|49648429|emb|CAG80749.1| YALI0D08162p [Yarrowia lipolytica CLIB122]
Length = 202
Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 70/132 (53%), Gaps = 1/132 (0%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
D++ ++ + V K E EG+ V+L +WDTAGQE F IT +YYRGA ++ +
Sbjct: 31 DTYTDSYISTIGVDFKIRTLELEGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDV 90
Query: 108 IDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
D+D+F +W +++ E + +LV NK D+ D+ VV A + +LG + T
Sbjct: 91 TDQDTFNNVKTWFHEIDRYATEGVNKLLVGNKSDITDKKVVEYTVAKEFADSLGIPFLET 150
Query: 167 SVKEDINVNSIF 178
S K NV F
Sbjct: 151 SAKNATNVEQAF 162
>gi|307207614|gb|EFN85274.1| Ras-related protein Rab-3 [Harpegnathos saltator]
Length = 222
Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 71/135 (52%), Gaps = 1/135 (0%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
DSF +A + + K + V+L +WDTAGQE + IT AYYRGA ++ +
Sbjct: 43 DSFTSAFVSTVGIDFKVKTVFRHDKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDI 102
Query: 108 IDRDSFEAAHSWKMKVENEC-GEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
+ +SF + W +++ +LV NK D+ ++ V++ E L+ LG R T
Sbjct: 103 TNEESFNSVQDWVTQIKTYSWDNAQVILVGNKCDMEEERVISSERGRQLAEQLGVRFFET 162
Query: 167 SVKEDINVNSIFRYL 181
S KE+INV ++F L
Sbjct: 163 SAKENINVKAVFEQL 177
>gi|224074217|ref|XP_002304305.1| predicted protein [Populus trichocarpa]
gi|118485751|gb|ABK94725.1| unknown [Populus trichocarpa]
gi|222841737|gb|EEE79284.1| predicted protein [Populus trichocarpa]
Length = 203
Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 77/159 (48%), Gaps = 5/159 (3%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
DS+ ++ + V K E +G+ ++L +WDTAGQE F IT +YYRGA ++ +
Sbjct: 31 DSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDV 90
Query: 108 IDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
D++SF W +++ E + +LV NK DL VV+ E A + +G M T
Sbjct: 91 TDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMET 150
Query: 167 SVKEDINVNSIFRYLTTKCLSELRQQEEEYSINGNGLPP 205
S K NV F + +E++ + N PP
Sbjct: 151 SAKNATNVEQAFMAMA----AEIKNRMASQPAMNNARPP 185
>gi|321256350|ref|XP_003193368.1| ras-related protein ypt1 [Cryptococcus gattii WM276]
gi|317459838|gb|ADV21581.1| ras-related protein ypt1, putative [Cryptococcus gattii WM276]
gi|405119560|gb|AFR94332.1| GTP-binding protein ypt1 [Cryptococcus neoformans var. grubii H99]
Length = 205
Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 68/132 (51%), Gaps = 1/132 (0%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
D++ ++ + V K E EG+ V+L +WDTAGQE F IT +YYRGA ++ +
Sbjct: 32 DTYTESYISTIGVDFKIRTIELEGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDV 91
Query: 108 IDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
DRD++ W +++ E + +LV NK DL + VV EA + LG + T
Sbjct: 92 TDRDTYTNVKQWLQEIDRYAVEGVNKLLVGNKSDLATKKVVEYAEAKAFADELGIPFLET 151
Query: 167 SVKEDINVNSIF 178
S K NV F
Sbjct: 152 SAKNATNVEQAF 163
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 32/50 (64%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
EG+ V+L +WDTAGQE F IT +YYRGA ++ + DRD++ W
Sbjct: 54 EGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDRDTYTNVKQW 103
>gi|281203623|gb|EFA77820.1| Rab GTPase [Polysphondylium pallidum PN500]
Length = 214
Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 49/146 (33%), Positives = 71/146 (48%), Gaps = 4/146 (2%)
Query: 34 GAQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKA 93
G ++ FS DSF + + + K E EG+ ++L +WDTAGQE F IT A
Sbjct: 30 GKSCLLLRFS---EDSFTPSFITTIGIDFKIRTIELEGKRIKLQIWDTAGQERFRTITTA 86
Query: 94 YYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEA 152
YYRGA ++ + D SF +W +E E + +L+ NK DL ++ VV
Sbjct: 87 YYRGAMGILLVYDVTDEKSFGNIRNWIRNIEQHATESVNKMLIGNKCDLPEKKVVDSSRG 146
Query: 153 DLLSRALGCRLMRTSVKEDINVNSIF 178
L+ G + + TS K INV F
Sbjct: 147 KALADEHGIKFLETSAKNSINVEEAF 172
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 39/72 (54%), Gaps = 6/72 (8%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVSIKRTI 66
EG+ ++L +WDTAGQE F IT AYYRGA ++ + D SF +W R I
Sbjct: 63 EGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDEKSFGNIRNW------IRNI 116
Query: 67 KECEGEEVRLML 78
++ E V ML
Sbjct: 117 EQHATESVNKML 128
>gi|74831298|emb|CAI39279.1| rab_C81 [Paramecium tetraurelia]
Length = 172
Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 68/117 (58%), Gaps = 2/117 (1%)
Query: 74 VRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGE-IPT 132
V+L +WDTAGQ+ F IT +YYRGAQ +I F DR+SF W +++ E +
Sbjct: 18 VKLQIWDTAGQDRFRTITSSYYRGAQGIIIVFDVTDRESFNQIRQWMQEIDKFAAESVNK 77
Query: 133 VLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSEL 189
+LV NKID Q V+ +EA+ L+++ + TS K +IN+ + F +T + + +
Sbjct: 78 ILVGNKID-SSQRRVSTDEAEALAKSYSISYIETSAKTNINIENCFSLITRQIIQRV 133
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 30/46 (65%)
Query: 11 VRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
V+L +WDTAGQ+ F IT +YYRGAQ +I F DR+SF W
Sbjct: 18 VKLQIWDTAGQDRFRTITSSYYRGAQGIIIVFDVTDRESFNQIRQW 63
>gi|291235024|ref|XP_002737446.1| PREDICTED: Rab-protein 3-like isoform 3 [Saccoglossus kowalevskii]
Length = 227
Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 69/135 (51%), Gaps = 1/135 (0%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
DSF +A + + K + V+L +WDTAGQE + IT AYYRGA ++ +
Sbjct: 52 DSFTSAFVSTVGIDFKVKTVFRNDKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDV 111
Query: 108 IDRDSFEAAHSWKMKVENEC-GEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
+ +SF+A W +++ +LV NK D+ D+ VV+ + LS LG T
Sbjct: 112 TNEESFQAVQDWSTQIKTYSWDNAQVILVGNKCDMEDERVVSVDRGKQLSDQLGLEFFET 171
Query: 167 SVKEDINVNSIFRYL 181
S KE+INV F L
Sbjct: 172 SAKENINVKQTFERL 186
>gi|311907|emb|CAA51011.1| ras-related GTP-binding protein [Nicotiana tabacum]
Length = 203
Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 79/159 (49%), Gaps = 5/159 (3%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
D++ ++ + V K E +G+ ++L +WDTAGQE F IT +YYRGA ++ +
Sbjct: 31 DTYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDV 90
Query: 108 IDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
D++SF W +++ + + +LV NK DL VV+ E A + +G + T
Sbjct: 91 TDQESFNNVKQWLSEIDRYASDGVNKILVGNKSDLTANRVVSYETAKAFADEIGIPFLET 150
Query: 167 SVKEDINVNSIFRYLTTKCLSELRQQEEEYSINGNGLPP 205
S K+ NV F +T+ + + Q N + PP
Sbjct: 151 SAKDATNVEQAFMAMTSAIKNRMASQPA----NNSAKPP 185
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 32/50 (64%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
+G+ ++L +WDTAGQE F IT +YYRGA ++ + D++SF W
Sbjct: 53 DGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQW 102
>gi|301771968|ref|XP_002921400.1| PREDICTED: ras-related protein Rab-3D-like [Ailuropoda melanoleuca]
gi|281337382|gb|EFB12966.1| hypothetical protein PANDA_010292 [Ailuropoda melanoleuca]
Length = 219
Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 77/160 (48%), Gaps = 2/160 (1%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
DSF A + + K + ++L +WDTAGQE + IT AYYRGA ++ +
Sbjct: 45 DSFTPAFVSTVGIDFKVKTVYRHDKRIKLQIWDTAGQERYRTITTAYYRGAMGFLLMYDV 104
Query: 108 IDRDSFEAAHSWKMKVENEC-GEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
+++SF A W +++ +LV NK DL D+ VV E+ L+ LG
Sbjct: 105 ANQESFTAVQDWATQIKTYSWDNAQVILVGNKCDLEDERVVPTEDGRRLADDLGFEFFEA 164
Query: 167 SVKEDINVNSIFRYLTTKCLSELRQQEEEYSING-NGLPP 205
S KE+INV +F L ++ + E S G NG P
Sbjct: 165 SAKENINVKQVFERLVDVICEKMNESLEPSSSPGSNGKGP 204
>gi|242004797|ref|XP_002423263.1| RAB 3 and, putative [Pediculus humanus corporis]
gi|212506265|gb|EEB10525.1| RAB 3 and, putative [Pediculus humanus corporis]
Length = 255
Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 81/167 (48%), Gaps = 5/167 (2%)
Query: 19 AGQEEFDAITKAYYRGAQACVIT---FSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVR 75
A + FD + K G + T F D DSF +A + + K + V+
Sbjct: 47 AADQNFDYMFKLLIIGNSSVGKTSFLFRYAD-DSFTSAFVSTVGIDFKVKTVFRHDKRVK 105
Query: 76 LMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENEC-GEIPTVL 134
L +WDTAGQE + IT AYYRGA ++ + + +SF + W +++ +L
Sbjct: 106 LQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNSVQDWVTQIKTYSWDNAQVIL 165
Query: 135 VQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYL 181
V NK D+ D+ V++ E LS LG TS KE+INV ++F L
Sbjct: 166 VGNKCDMEDERVISFERGKQLSEQLGIEFFETSAKENINVKAVFERL 212
>gi|198469194|ref|XP_002134246.1| GA26078 [Drosophila pseudoobscura pseudoobscura]
gi|198146758|gb|EDY72873.1| GA26078 [Drosophila pseudoobscura pseudoobscura]
Length = 204
Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 78/161 (48%), Gaps = 2/161 (1%)
Query: 34 GAQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKA 93
G I F D D+F + + + K E G++++L +WDTAGQE F IT +
Sbjct: 19 GVGKTCILFRFSD-DAFTSTFISTIGIDFKIKTVELRGKKIKLQIWDTAGQERFHTITTS 77
Query: 94 YYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEA 152
YYRGA ++ + + SFE W ++ E + +++ NK D+ D+ VV E
Sbjct: 78 YYRGAMGIMLVYDITNEKSFENIVKWLRNIDEHANEDVEKMILGNKCDMTDKRVVNKERG 137
Query: 153 DLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSELRQQE 193
+ ++R G R M TS K + N+ F L L + +E
Sbjct: 138 EAIAREHGIRFMETSAKSNTNIERAFCELAEAILDKTSGKE 178
>gi|351705685|gb|EHB08604.1| Ras-related protein Rab-30 [Heterocephalus glaber]
Length = 232
Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 49/125 (39%), Positives = 74/125 (59%), Gaps = 1/125 (0%)
Query: 68 ECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVEN-E 126
E GE+V+L +WDTAGQE F +IT++YYR A A ++T+ +SF W ++E
Sbjct: 82 EINGEKVKLQIWDTAGQERFRSITQSYYRCANALILTYDITCEESFRCLPEWLREIEQYA 141
Query: 127 CGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCL 186
++ +VLV NKIDL ++ V+ + A+ S+A + TS KE NV +F L + +
Sbjct: 142 SNKVISVLVGNKIDLAERREVSQQRAEEFSKAQDMYYLETSGKESDNVEKLFLDLACQFI 201
Query: 187 SELRQ 191
SE RQ
Sbjct: 202 SEARQ 206
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 33/49 (67%)
Query: 8 GEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
GE+V+L +WDTAGQE F +IT++YYR A A ++T+ +SF W
Sbjct: 85 GEKVKLQIWDTAGQERFRSITQSYYRCANALILTYDITCEESFRCLPEW 133
>gi|197100646|ref|NP_001124875.1| ras-related protein Rab-8B [Pongo abelii]
gi|395822281|ref|XP_003784449.1| PREDICTED: ras-related protein Rab-8B [Otolemur garnettii]
gi|403298222|ref|XP_003939929.1| PREDICTED: ras-related protein Rab-8B isoform 1 [Saimiri
boliviensis boliviensis]
gi|75070935|sp|Q5REC9.1|RAB8B_PONAB RecName: Full=Ras-related protein Rab-8B; Flags: Precursor
gi|55726211|emb|CAH89878.1| hypothetical protein [Pongo abelii]
Length = 207
Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 84/159 (52%), Gaps = 3/159 (1%)
Query: 48 DSFEAAHSWKMKVSIK-RTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFS 106
D+F + + K RTI E +G++++L +WDTAGQE F IT AYYRGA ++ +
Sbjct: 31 DAFNTTFISTIGIDFKIRTI-ELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYD 89
Query: 107 TIDRDSFEAAHSWKMKV-ENECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMR 165
+ SF+ +W + E+ ++ +++ NK D+ D+ V+ E + L+ G + +
Sbjct: 90 ITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCDMNDKRQVSKERGEKLAIDYGIKFLE 149
Query: 166 TSVKEDINVNSIFRYLTTKCLSELRQQEEEYSINGNGLP 204
TS K NV F L +++L ++ + + G G P
Sbjct: 150 TSAKSSTNVEEAFFTLARDIMTKLNRKMNDSNSAGAGGP 188
>gi|334326972|ref|XP_001368638.2| PREDICTED: ras-related protein Rab-8A-like [Monodelphis domestica]
Length = 207
Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 82/155 (52%), Gaps = 1/155 (0%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
D+F + + + K E +G+ ++L +WDTAGQE F IT AYYRGA ++ +
Sbjct: 31 DAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDI 90
Query: 108 IDRDSFEAAHSWKMKV-ENECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
+ SF+ +W + E+ ++ +++ NK D+ ++ V+ E + L+ G + M T
Sbjct: 91 TNEKSFDNIRNWIRNIEEHASADVEKMILGNKCDVNERRQVSKERGEKLALDYGIKFMET 150
Query: 167 SVKEDINVNSIFRYLTTKCLSELRQQEEEYSINGN 201
S K +INV + F L +++ ++ E S GN
Sbjct: 151 SAKANINVENAFFTLARDIKAKMDKKLEGNSPQGN 185
>gi|300120200|emb|CBK19754.2| unnamed protein product [Blastocystis hominis]
Length = 219
Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 78/153 (50%), Gaps = 1/153 (0%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
D+F++++ + + + VRL LWDTAGQE F ++ +Y R + VI +
Sbjct: 45 DTFDSSYQATIGIDFLSKTMYLDDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDL 104
Query: 108 IDRDSFEAAHSWKMKVENECG-EIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
+R SFE W V E G ++ VLV NK DL D V+ E + L++ L + T
Sbjct: 105 TNRTSFENTRKWLSDVRVERGDDVVIVLVGNKTDLSDSRQVSTNEGEALAKELNVLFIET 164
Query: 167 SVKEDINVNSIFRYLTTKCLSELRQQEEEYSIN 199
S K + NV ++FR + T E + ++E S N
Sbjct: 165 SAKCNFNVTALFRKVATTLPGEGKPKKEGESEN 197
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 38/68 (55%), Gaps = 6/68 (8%)
Query: 11 VRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECE 70
VRL LWDTAGQE F ++ +Y R + VI + +R SFE W V ++R
Sbjct: 71 VRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDLTNRTSFENTRKWLSDVRVER------ 124
Query: 71 GEEVRLML 78
G++V ++L
Sbjct: 125 GDDVVIVL 132
>gi|291235020|ref|XP_002737444.1| PREDICTED: Rab-protein 3-like isoform 1 [Saccoglossus kowalevskii]
gi|291235022|ref|XP_002737445.1| PREDICTED: Rab-protein 3-like isoform 2 [Saccoglossus kowalevskii]
Length = 219
Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 69/135 (51%), Gaps = 1/135 (0%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
DSF +A + + K + V+L +WDTAGQE + IT AYYRGA ++ +
Sbjct: 44 DSFTSAFVSTVGIDFKVKTVFRNDKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDV 103
Query: 108 IDRDSFEAAHSWKMKVEN-ECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
+ +SF+A W +++ +LV NK D+ D+ VV+ + LS LG T
Sbjct: 104 TNEESFQAVQDWSTQIKTYSWDNAQVILVGNKCDMEDERVVSVDRGKQLSDQLGLEFFET 163
Query: 167 SVKEDINVNSIFRYL 181
S KE+INV F L
Sbjct: 164 SAKENINVKQTFERL 178
>gi|170038218|ref|XP_001846949.1| ras-related protein Rab-10 [Culex quinquefasciatus]
gi|167881762|gb|EDS45145.1| ras-related protein Rab-10 [Culex quinquefasciatus]
Length = 370
Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 74/141 (52%), Gaps = 3/141 (2%)
Query: 56 WKMKVSIKRTIK--ECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSF 113
+K I IK E G++++L +WDTAGQE F IT +YYRGA ++ + + SF
Sbjct: 204 FKFNAGIDFKIKTIELRGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSF 263
Query: 114 EAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDI 172
+ W ++ E + +++ NK D+ D+ VV+ E + ++R R M TS K ++
Sbjct: 264 DNIVKWLRNIDEHANEDVEKMILGNKCDMTDKRVVSQERGESIAREHDIRFMETSAKANV 323
Query: 173 NVNSIFRYLTTKCLSELRQQE 193
N+ FR L L + +E
Sbjct: 324 NIEKAFRELAEAILDKTAGKE 344
>gi|351723507|ref|NP_001238305.1| uncharacterized protein LOC100306147 [Glycine max]
gi|255627683|gb|ACU14186.1| unknown [Glycine max]
Length = 203
Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 76/159 (47%), Gaps = 5/159 (3%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
DS+ ++ + V K E +G+ ++L +WDTAGQE F IT +YYRGA +I +
Sbjct: 31 DSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDV 90
Query: 108 IDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
D DSF W +++ + + +LV NK DL VV+ + A + +G M T
Sbjct: 91 TDEDSFNNVKQWLSEIDRYASDNVNKLLVGNKSDLTANRVVSYDTAKEFADQIGIPFMET 150
Query: 167 SVKEDINVNSIFRYLTTKCLSELRQQEEEYSINGNGLPP 205
S K+ NV F ++ + + Q N PP
Sbjct: 151 SAKDATNVEDAFMAMSAAIKNRMASQPSA----NNAKPP 185
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 31/50 (62%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
+G+ ++L +WDTAGQE F IT +YYRGA +I + D DSF W
Sbjct: 53 DGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDEDSFNNVKQW 102
>gi|358248394|ref|NP_001239874.1| uncharacterized protein LOC100796206 [Glycine max]
gi|414832|gb|AAA34003.1| Rab7p [Glycine max]
Length = 201
Score = 87.0 bits (214), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 79/164 (48%), Gaps = 7/164 (4%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
DS+ ++ + V K E EG+ V+L +WDTAGQE F IT +YYRGA +I +
Sbjct: 31 DSYVDSYISTIGVDFKIRTVELEGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDV 90
Query: 108 IDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
+ +SF W +++ + + +LV NK DL+D VV A + LG + T
Sbjct: 91 TEMESFNNVKQWLNEIDRYANDTVCKLLVGNKSDLVDNKVVDSLTAKAFADELGIPFLET 150
Query: 167 SVKEDINVNSIFRYLTTKCLSELRQQ------EEEYSINGNGLP 204
S K+ INV F + + ++ Q E + G +P
Sbjct: 151 SAKDSINVEQAFLTMAAEIKKKMGSQTTTGKSAESVQMKGQPIP 194
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 31/50 (62%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
EG+ V+L +WDTAGQE F IT +YYRGA +I + + +SF W
Sbjct: 53 EGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQW 102
>gi|334688829|ref|NP_001229300.1| RAB8A, member RAS oncogene family [Pan troglodytes]
gi|397484920|ref|XP_003813613.1| PREDICTED: ras-related protein Rab-8A isoform 1 [Pan paniscus]
gi|343961933|dbj|BAK62554.1| ras-related protein Rab-8A [Pan troglodytes]
gi|410222044|gb|JAA08241.1| RAB8A, member RAS oncogene family [Pan troglodytes]
gi|410266796|gb|JAA21364.1| RAB8A, member RAS oncogene family [Pan troglodytes]
gi|410342733|gb|JAA40313.1| RAB8A, member RAS oncogene family [Pan troglodytes]
Length = 207
Score = 87.0 bits (214), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 82/155 (52%), Gaps = 1/155 (0%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
D+F + + + K E +G+ ++L +WDTAGQE F IT AYYRGA ++ +
Sbjct: 31 DAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDI 90
Query: 108 IDRDSFEAAHSWKMKV-ENECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
+ SF+ +W + E+ ++ +++ NK D+ D+ V+ E + L+ G + M T
Sbjct: 91 TNEKSFDNIRNWIRNIEEHASADVEKMILGNKCDVNDKRQVSKERGEKLALDYGIKFMET 150
Query: 167 SVKEDINVNSIFRYLTTKCLSELRQQEEEYSINGN 201
S K +INV + F L +++ ++ E S G+
Sbjct: 151 SAKANINVENAFFTLARDIKAKMDKKLEGNSPQGS 185
>gi|330800470|ref|XP_003288259.1| rsmB, RAS family GTPase [Dictyostelium purpureum]
gi|325081715|gb|EGC35221.1| rsmB, RAS family GTPase [Dictyostelium purpureum]
Length = 280
Score = 87.0 bits (214), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 89/172 (51%), Gaps = 9/172 (5%)
Query: 34 GAQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKA 93
G IT I RD+FE ++ + S + GE++RL + DTAGQE+F +
Sbjct: 16 GVGKSSITLKFI-RDTFEDVYNPTFENSYIAELDINYGEKIRLEILDTAGQEDFINLRDH 74
Query: 94 YYRGAQACVITFSTIDRDSFEAAHSWKMKVEN--ECGEIPTVLVQNKIDLLD-QSVVAPE 150
Y R +A ++ +S R SF K + N +C ++P +LV NK+DL + + V+ E
Sbjct: 75 YARIGEAFILVYSITCRGSFNEMKHIKENITNIKQCTDVPMILVGNKVDLSNTERKVSIE 134
Query: 151 EADLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSELRQQEEEYSINGNG 202
E L+R+ GC + TS KE+IN+ F+ L ++ +E +N NG
Sbjct: 135 EGKSLARSFGCAFIETSAKENINIEETFKTLVNDW-----KKSKERKVNKNG 181
Score = 42.0 bits (97), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Query: 5 ICEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVSIKR 64
I GE++RL + DTAGQE+F + Y R +A ++ +S R SF K ++
Sbjct: 49 INYGEKIRLEILDTAGQEDFINLRDHYARIGEAFILVYSITCRGSFNEMKHIKENIT--- 105
Query: 65 TIKEC 69
IK+C
Sbjct: 106 NIKQC 110
>gi|38372905|ref|NP_075615.2| ras-related protein Rab-8A [Mus musculus]
gi|162287395|ref|NP_446450.2| ras-related protein Rab-8A [Rattus norvegicus]
gi|354473828|ref|XP_003499134.1| PREDICTED: ras-related protein Rab-8A-like [Cricetulus griseus]
gi|82592519|sp|P55258.2|RAB8A_MOUSE RecName: Full=Ras-related protein Rab-8A; AltName: Full=Oncogene
c-mel; Flags: Precursor
gi|82592520|sp|P35280.2|RAB8A_RAT RecName: Full=Ras-related protein Rab-8A; Flags: Precursor
gi|18043409|gb|AAH19990.1| RAB8A, member RAS oncogene family [Mus musculus]
gi|26344994|dbj|BAC36146.1| unnamed protein product [Mus musculus]
gi|26347909|dbj|BAC37603.1| unnamed protein product [Mus musculus]
gi|26348727|dbj|BAC38003.1| unnamed protein product [Mus musculus]
gi|77748034|gb|AAI05864.1| Rab8a protein [Rattus norvegicus]
gi|112292969|dbj|BAF02862.1| Rab8A [Mus musculus]
gi|148678837|gb|EDL10784.1| RAB8A, member RAS oncogene family, isoform CRA_a [Mus musculus]
gi|149036165|gb|EDL90831.1| RAB8A, member RAS oncogene family, isoform CRA_a [Rattus
norvegicus]
gi|338855122|gb|AEJ31940.1| RAB8 [Rattus norvegicus]
Length = 207
Score = 87.0 bits (214), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 85/156 (54%), Gaps = 3/156 (1%)
Query: 48 DSFEAAHSWKMKVSIK-RTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFS 106
D+F + + + K RTI E +G+ ++L +WDTAGQE F IT AYYRGA ++ +
Sbjct: 31 DAFNSTFISTIGIDFKIRTI-ELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYD 89
Query: 107 TIDRDSFEAAHSWKMKV-ENECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMR 165
+ SF+ +W + E+ ++ +++ NK D+ D+ V+ E + L+ G + M
Sbjct: 90 ITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCDVNDKRQVSKERGEKLALDYGIKFME 149
Query: 166 TSVKEDINVNSIFRYLTTKCLSELRQQEEEYSINGN 201
TS K +INV + F L +++ ++ E S G+
Sbjct: 150 TSAKANINVENAFFTLARDIKAKMDKKLEGNSPQGS 185
>gi|410950754|ref|XP_003982068.1| PREDICTED: ras-related protein Rab-8A [Felis catus]
Length = 207
Score = 87.0 bits (214), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 82/155 (52%), Gaps = 1/155 (0%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
D+F + + + K E +G+ ++L +WDTAGQE F IT AYYRGA ++ +
Sbjct: 31 DAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDI 90
Query: 108 IDRDSFEAAHSWKMKV-ENECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
+ SF+ +W + E+ ++ +++ NK D+ D+ V+ E + L+ G + M T
Sbjct: 91 TNEKSFDNIRNWIRNIEEHASADVEKMILGNKCDVNDKRQVSKERGEKLALDYGIKFMET 150
Query: 167 SVKEDINVNSIFRYLTTKCLSELRQQEEEYSINGN 201
S K +INV + F L +++ ++ E S G+
Sbjct: 151 SAKANINVENAFFTLARDIKAKMDKKLEGNSPQGS 185
>gi|117939065|dbj|BAF36686.1| Small G Protein RAB [Symbiotic protist of Reticulitermes speratus]
Length = 191
Score = 87.0 bits (214), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 73/142 (51%), Gaps = 1/142 (0%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
D++ + + V K + G+ ++L +WDTAGQ+ F IT +YYRGA +I +
Sbjct: 21 DTYSGTYIATIGVDFKIRTIQIGGKVIKLQIWDTAGQDRFRTITSSYYRGANGIIIVYDV 80
Query: 108 IDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
+RDSF W ++E+ E + +LV NK DL + VV A+ L+ +L + T
Sbjct: 81 TNRDSFNNVQMWMKEIESYASEGVCRLLVGNKCDLTSKKVVDYNTANQLADSLAISFLET 140
Query: 167 SVKEDINVNSIFRYLTTKCLSE 188
S K NV F+ + T+ +
Sbjct: 141 SAKNATNVEQAFQTMATEIMKH 162
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 31/49 (63%)
Query: 8 GEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
G+ ++L +WDTAGQ+ F IT +YYRGA +I + +RDSF W
Sbjct: 44 GKVIKLQIWDTAGQDRFRTITSSYYRGANGIIIVYDVTNRDSFNNVQMW 92
>gi|74152890|dbj|BAE27741.1| unnamed protein product [Mus musculus]
Length = 208
Score = 87.0 bits (214), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 82/155 (52%), Gaps = 1/155 (0%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
D+F + + + K E +G+ ++L +WDTAGQE F IT AYYRGA ++ +
Sbjct: 31 DAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDI 90
Query: 108 IDRDSFEAAHSWKMKV-ENECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
+ SF+ +W + E+ ++ +++ NK D+ D+ V+ E + L+ G + M T
Sbjct: 91 TNEKSFDNIRNWIRNIEEHASADVEKMILGNKCDVNDKRQVSKERGEKLALDYGIKFMET 150
Query: 167 SVKEDINVNSIFRYLTTKCLSELRQQEEEYSINGN 201
S K +INV + F L +++ ++ E S G+
Sbjct: 151 SAKANINVENAFFTLARDIKAKMDKKLEGNSPQGS 185
>gi|354469298|ref|XP_003497066.1| PREDICTED: ras-related protein Rab-10-like [Cricetulus griseus]
Length = 200
Score = 87.0 bits (214), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 80/160 (50%), Gaps = 3/160 (1%)
Query: 35 AQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAY 94
+ CV+ F D D+F + + K E +G++++L +WDTAGQE F IT +Y
Sbjct: 21 GKTCVL-FRFSD-DAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQERFHTITTSY 78
Query: 95 YRGAQACVITFSTIDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEAD 153
YRGA ++ + + SFE W ++ E + +L+ NK D+ D+ VV + +
Sbjct: 79 YRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKCDMDDKRVVPKSKGE 138
Query: 154 LLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSELRQQE 193
++R G R TS K +IN+ F L L + +E
Sbjct: 139 QIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVKE 178
>gi|390979747|gb|AFM30910.1| small GTPase [Hevea brasiliensis]
Length = 203
Score = 87.0 bits (214), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 75/159 (47%), Gaps = 5/159 (3%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
DS+ ++ + V K E +G+ ++L +WDTAGQE F IT +YYRGA +I +
Sbjct: 31 DSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDV 90
Query: 108 IDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
D++SF W +++ E + +LV NK DL VV+ E A + +G M T
Sbjct: 91 TDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMET 150
Query: 167 SVKEDINVNSIFRYLTTKCLSELRQQEEEYSINGNGLPP 205
S K NV F + + + Q N PP
Sbjct: 151 SAKNATNVEEAFMAMAADIKNRMASQPAA----NNARPP 185
>gi|30585389|gb|AAP36967.1| Homo sapiens mel transforming oncogene (derived from cell line
NK14)- RAB8 homolog [synthetic construct]
gi|61373064|gb|AAX43969.1| RAB8A member RAS oncogene family [synthetic construct]
gi|61373066|gb|AAX43970.1| RAB8A member RAS oncogene family [synthetic construct]
Length = 208
Score = 86.7 bits (213), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 82/155 (52%), Gaps = 1/155 (0%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
D+F + + + K E +G+ ++L +WDTAGQE F IT AYYRGA ++ +
Sbjct: 31 DAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDI 90
Query: 108 IDRDSFEAAHSWKMKV-ENECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
+ SF+ +W + E+ ++ +++ NK D+ D+ V+ E + L+ G + M T
Sbjct: 91 TNEKSFDNIRNWIRNIEEHASADVEKMILGNKCDVNDKRQVSKERGEKLALDYGIKFMET 150
Query: 167 SVKEDINVNSIFRYLTTKCLSELRQQEEEYSINGN 201
S K +INV + F L +++ ++ E S G+
Sbjct: 151 SAKANINVENAFFTLARDIKAKMDKKLEGNSPQGS 185
>gi|348504692|ref|XP_003439895.1| PREDICTED: ras-related protein Rab-8A-like [Oreochromis niloticus]
Length = 206
Score = 86.7 bits (213), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 92/170 (54%), Gaps = 7/170 (4%)
Query: 35 AQACVI-TFSTIDRDSFEAAHSWKMKVSIK-RTIKECEGEEVRLMLWDTAGQEEFDAITK 92
+ CV+ FS D+F + + + K RTI E +G++++L +WDTAGQE F IT
Sbjct: 20 GKTCVLFRFS---EDAFNSTFISTIGIDFKIRTI-ELDGKKIKLQIWDTAGQERFRTITT 75
Query: 93 AYYRGAQACVITFSTIDRDSFEAAHSWKMKV-ENECGEIPTVLVQNKIDLLDQSVVAPEE 151
AYYRGA ++ + + SFE +W + E+ ++ +++ NK D+ D+ V+ E
Sbjct: 76 AYYRGAMGIMLVYDITNEKSFENIKNWIRNIEEHASADVERMVLGNKCDVNDKRQVSKER 135
Query: 152 ADLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSELRQQEEEYSINGN 201
+ L+ G + M TS K +INV + F L +++ ++ E + G+
Sbjct: 136 GEKLALEYGIKFMETSAKANINVENAFLTLARDIKAKMDKKLEGNNPQGS 185
>gi|327505561|gb|AEA92308.1| Rab4 [Hevea brasiliensis]
Length = 202
Score = 86.7 bits (213), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 70/132 (53%), Gaps = 1/132 (0%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
DS+ ++ + V K E +G+ ++L +WDTAGQE F IT +YYRGA +I +
Sbjct: 31 DSYVDSYISTIGVDFKIRTVELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDV 90
Query: 108 IDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
+ +SF W +++ + + +LV NK DL+D VV + A + LG + T
Sbjct: 91 TEMESFNNVKQWLNEIDRYANDSVCKLLVGNKCDLVDNKVVDTQTAKAFADELGIPFLET 150
Query: 167 SVKEDINVNSIF 178
S K+ INV F
Sbjct: 151 SAKDSINVEQAF 162
>gi|117939063|dbj|BAF36685.1| Small G Protein RAB [Symbiotic protist of Reticulitermes speratus]
Length = 190
Score = 86.7 bits (213), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 73/142 (51%), Gaps = 1/142 (0%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
D++ + + V K + G+ ++L +WDTAGQ+ F IT +YYRGA +I +
Sbjct: 21 DTYSGTYIATIGVDFKIRTIQIGGKVIKLQIWDTAGQDRFRTITSSYYRGANGIIIVYDV 80
Query: 108 IDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
+RDSF W ++E+ E + +LV NK DL+++ VV L+ + G + T
Sbjct: 81 TNRDSFNNVQMWVKEIESYATEGVCRLLVGNKCDLVNKKVVDYNTGKQLADSFGISFLET 140
Query: 167 SVKEDINVNSIFRYLTTKCLSE 188
S K NV F+ + T+ +
Sbjct: 141 SAKNATNVEQAFQTMATEIMKH 162
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 31/49 (63%)
Query: 8 GEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
G+ ++L +WDTAGQ+ F IT +YYRGA +I + +RDSF W
Sbjct: 44 GKVIKLQIWDTAGQDRFRTITSSYYRGANGIIIVYDVTNRDSFNNVQMW 92
>gi|431921946|gb|ELK19119.1| Ras-related protein Rab-8A [Pteropus alecto]
Length = 207
Score = 86.7 bits (213), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 82/155 (52%), Gaps = 1/155 (0%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
D+F + + + K E +G+ ++L +WDTAGQE F IT AYYRGA ++ +
Sbjct: 31 DAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDI 90
Query: 108 IDRDSFEAAHSWKMKV-ENECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
+ SF+ +W + E+ ++ +++ NK D+ D+ V+ E + L+ G + M T
Sbjct: 91 TNEKSFDNIRNWIRNIEEHASADVEKMILGNKCDVNDKRQVSKERGEKLALDYGIKFMET 150
Query: 167 SVKEDINVNSIFRYLTTKCLSELRQQEEEYSINGN 201
S K +INV + F L +++ ++ E S G+
Sbjct: 151 SAKANINVENAFFTLARDIKAKMDKKLEGNSPQGS 185
>gi|255581964|ref|XP_002531780.1| protein with unknown function [Ricinus communis]
gi|223528573|gb|EEF30594.1| protein with unknown function [Ricinus communis]
Length = 203
Score = 86.7 bits (213), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 77/159 (48%), Gaps = 5/159 (3%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
DS+ ++ + V K E +G+ ++L +WDTAGQE F IT +YYRGA ++ +
Sbjct: 31 DSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDV 90
Query: 108 IDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
D++SF W +++ E + +LV NK DL VV+ E A + +G M T
Sbjct: 91 TDQESFNNVKQWLNEIDRYASENVNKLLVGNKNDLTANKVVSYETAKAFADEIGIPFMET 150
Query: 167 SVKEDINVNSIFRYLTTKCLSELRQQEEEYSINGNGLPP 205
S K NV F + +E++ + N PP
Sbjct: 151 SAKNATNVEQAFMAMA----AEIKNRMASQPAMNNARPP 185
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 32/50 (64%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
+G+ ++L +WDTAGQE F IT +YYRGA ++ + D++SF W
Sbjct: 53 DGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQW 102
>gi|16933567|ref|NP_005361.2| ras-related protein Rab-8A [Homo sapiens]
gi|55741707|ref|NP_001003152.1| ras-related protein Rab-8A [Canis lupus familiaris]
gi|345090993|ref|NP_001230731.1| RAB8A, member RAS oncogene family [Sus scrofa]
gi|194223710|ref|XP_001914834.1| PREDICTED: ras-related protein Rab-8A-like [Equus caballus]
gi|402904630|ref|XP_003915145.1| PREDICTED: ras-related protein Rab-8A isoform 1 [Papio anubis]
gi|403303362|ref|XP_003942297.1| PREDICTED: ras-related protein Rab-8A isoform 1 [Saimiri
boliviensis boliviensis]
gi|426387629|ref|XP_004060266.1| PREDICTED: ras-related protein Rab-8A isoform 1 [Gorilla gorilla
gorilla]
gi|46577633|sp|P61007.1|RAB8A_CANFA RecName: Full=Ras-related protein Rab-8A; AltName: Full=Oncogene
c-mel; Flags: Precursor
gi|46810392|sp|P61006.1|RAB8A_HUMAN RecName: Full=Ras-related protein Rab-8A; AltName: Full=Oncogene
c-mel; Flags: Precursor
gi|75076100|sp|Q4R5P1.1|RAB8A_MACFA RecName: Full=Ras-related protein Rab-8A; Flags: Precursor
gi|20379062|gb|AAM21091.1|AF498943_1 small GTP binding protein RAB8 [Homo sapiens]
gi|452318|emb|CAA40065.1| rab8 small GTP binding protein [Homo sapiens]
gi|6006436|emb|CAB56776.1| rab8 [Canis lupus familiaris]
gi|12804237|gb|AAH02977.1| RAB8A, member RAS oncogene family [Homo sapiens]
gi|30583207|gb|AAP35848.1| mel transforming oncogene (derived from cell line NK14)- RAB8
homolog [Homo sapiens]
gi|49168650|emb|CAG38820.1| RAB8A [Homo sapiens]
gi|49457542|emb|CAG47070.1| RAB8A [Homo sapiens]
gi|60655631|gb|AAX32379.1| RAB8A [synthetic construct]
gi|67970483|dbj|BAE01584.1| unnamed protein product [Macaca fascicularis]
gi|119604932|gb|EAW84526.1| RAB8A, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|119604933|gb|EAW84527.1| RAB8A, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|123983416|gb|ABM83449.1| RAB8A, member RAS oncogene family [synthetic construct]
gi|123998119|gb|ABM86661.1| RAB8A, member RAS oncogene family [synthetic construct]
gi|355703272|gb|EHH29763.1| Oncogene c-mel [Macaca mulatta]
gi|355755572|gb|EHH59319.1| Oncogene c-mel [Macaca fascicularis]
gi|380785255|gb|AFE64503.1| ras-related protein Rab-8A [Macaca mulatta]
gi|383409677|gb|AFH28052.1| ras-related protein Rab-8A [Macaca mulatta]
gi|384944060|gb|AFI35635.1| ras-related protein Rab-8A [Macaca mulatta]
gi|740474|prf||2005309A rab8 GTPase
Length = 207
Score = 86.7 bits (213), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 82/155 (52%), Gaps = 1/155 (0%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
D+F + + + K E +G+ ++L +WDTAGQE F IT AYYRGA ++ +
Sbjct: 31 DAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDI 90
Query: 108 IDRDSFEAAHSWKMKV-ENECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
+ SF+ +W + E+ ++ +++ NK D+ D+ V+ E + L+ G + M T
Sbjct: 91 TNEKSFDNIRNWIRNIEEHASADVEKMILGNKCDVNDKRQVSKERGEKLALDYGIKFMET 150
Query: 167 SVKEDINVNSIFRYLTTKCLSELRQQEEEYSINGN 201
S K +INV + F L +++ ++ E S G+
Sbjct: 151 SAKANINVENAFFTLARDIKAKMDKKLEGNSPQGS 185
>gi|47225370|emb|CAG11853.1| unnamed protein product [Tetraodon nigroviridis]
Length = 160
Score = 86.7 bits (213), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 74/142 (52%), Gaps = 4/142 (2%)
Query: 34 GAQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKA 93
G +I F+ D+F + + + + K + +G++V+L +WDTAGQE F IT A
Sbjct: 20 GKTCLIIRFA---EDNFNSTYISTIGIDFKVKTIDVDGKKVKLQVWDTAGQERFKTITTA 76
Query: 94 YYRGAQACVITFSTIDRDSFEAAHSWKMKV-ENECGEIPTVLVQNKIDLLDQSVVAPEEA 152
YYRGA ++ + D SFE +W + EN + +L+ NK D+ + V+ E
Sbjct: 77 YYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVSRMLLGNKCDIEAKRKVSRETG 136
Query: 153 DLLSRALGCRLMRTSVKEDINV 174
+ L++ G + TS K INV
Sbjct: 137 EKLAKDHGIKFFETSAKSSINV 158
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 41/73 (56%), Gaps = 6/73 (8%)
Query: 6 CEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVSIKRT 65
+G++V+L +WDTAGQE F IT AYYRGA ++ + D SFE +W ++
Sbjct: 52 VDGKKVKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNW------MKS 105
Query: 66 IKECEGEEVRLML 78
IKE V ML
Sbjct: 106 IKENASAGVSRML 118
>gi|115496115|ref|NP_001069785.1| ras-related protein Rab-8B [Bos taurus]
gi|116255981|sp|Q2HJI8.1|RAB8B_BOVIN RecName: Full=Ras-related protein Rab-8B; Flags: Precursor
gi|88682949|gb|AAI05331.1| RAB8B, member RAS oncogene family [Bos taurus]
Length = 207
Score = 86.7 bits (213), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 85/159 (53%), Gaps = 3/159 (1%)
Query: 48 DSFEAAHSWKMKVSIK-RTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFS 106
D+F + + K RTI E +G++++L +WDTAGQE F IT AYYRGA ++ +
Sbjct: 31 DAFNTTFISTIGIDFKIRTI-ELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYD 89
Query: 107 TIDRDSFEAAHSWKMKV-ENECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMR 165
+ SF+ +W + E+ ++ +++ NK D+ D+ V+ E + L+ G + +
Sbjct: 90 ITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCDMNDKRQVSKERGEKLAIDYGIKFLE 149
Query: 166 TSVKEDINVNSIFRYLTTKCLSELRQQEEEYSINGNGLP 204
S K +NV F L +++L ++ + + +G G P
Sbjct: 150 ASAKSSMNVEEAFFTLARDIMTKLNRKMNDSNSSGAGGP 188
>gi|413923309|gb|AFW63241.1| hypothetical protein ZEAMMB73_436511 [Zea mays]
Length = 272
Score = 86.7 bits (213), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 47/132 (35%), Positives = 69/132 (52%), Gaps = 1/132 (0%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
DS+ ++ + V K E +G+ ++L +WDTAGQE F IT +YYRGA +I +
Sbjct: 100 DSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDV 159
Query: 108 IDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
D++SF W +++ + + +LV NK DL VVA E A + +G M T
Sbjct: 160 TDQESFNNVKQWLNEIDRYASDNVNKLLVGNKSDLTANKVVATETAKAFADEMGIPFMET 219
Query: 167 SVKEDINVNSIF 178
S K INV F
Sbjct: 220 SAKNAINVEQAF 231
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 32/50 (64%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
+G+ ++L +WDTAGQE F IT +YYRGA +I + D++SF W
Sbjct: 122 DGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQW 171
>gi|224090593|ref|XP_002187909.1| PREDICTED: ras-related protein Rab-3C [Taeniopygia guttata]
Length = 227
Score = 86.7 bits (213), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 72/136 (52%), Gaps = 3/136 (2%)
Query: 48 DSFEAAHSWKMKVSIK-RTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFS 106
DSF +A + + K +T+ + E + ++L +WDTAGQE + IT AYYRGA ++ +
Sbjct: 53 DSFTSAFVSTVGIDFKVKTVFKNE-KRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYD 111
Query: 107 TIDRDSFEAAHSWKMKVENEC-GEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMR 165
+ DSF A W +++ +LV NK D+ D+ V+ E L+ LG
Sbjct: 112 ITNEDSFNAVQDWSTQIKTYSWDNAQVILVGNKCDMEDERVIFTERGKHLAEQLGFEFFE 171
Query: 166 TSVKEDINVNSIFRYL 181
TS KE+INV F L
Sbjct: 172 TSAKENINVKQTFERL 187
>gi|225454983|ref|XP_002281150.1| PREDICTED: GTP-binding protein YPTM2 [Vitis vinifera]
gi|297744977|emb|CBI38569.3| unnamed protein product [Vitis vinifera]
Length = 203
Score = 86.7 bits (213), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 78/159 (49%), Gaps = 5/159 (3%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
DS+ ++ + V K E +G+ ++L +WDTAGQE F IT +YYRGA +I +
Sbjct: 31 DSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDV 90
Query: 108 IDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
D++SF W +++ E + +LV NK DL VV+ E A + +G M T
Sbjct: 91 TDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMET 150
Query: 167 SVKEDINVNSIFRYLTTKCLSELRQQEEEYSINGNGLPP 205
S K NV F + + + Q ++N N PP
Sbjct: 151 SAKNATNVEQAFMAMAADIKTRMASQP---AMN-NARPP 185
Score = 59.3 bits (142), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 32/50 (64%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
+G+ ++L +WDTAGQE F IT +YYRGA +I + D++SF W
Sbjct: 53 DGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQW 102
>gi|7706563|ref|NP_057614.1| ras-related protein Rab-8B [Homo sapiens]
gi|383872868|ref|NP_001244884.1| ras-related protein Rab-8B [Macaca mulatta]
gi|332235867|ref|XP_003267126.1| PREDICTED: ras-related protein Rab-8B isoform 1 [Nomascus
leucogenys]
gi|397515492|ref|XP_003827984.1| PREDICTED: ras-related protein Rab-8B isoform 1 [Pan paniscus]
gi|402874511|ref|XP_003901079.1| PREDICTED: ras-related protein Rab-8B isoform 1 [Papio anubis]
gi|13638434|sp|Q92930.2|RAB8B_HUMAN RecName: Full=Ras-related protein Rab-8B; Flags: Precursor
gi|7209512|dbj|BAA92249.1| RAB-8b protein [Homo sapiens]
gi|18088350|gb|AAH20654.1| RAB8B, member RAS oncogene family [Homo sapiens]
gi|57997184|emb|CAI46143.1| hypothetical protein [Homo sapiens]
gi|193785490|dbj|BAG50856.1| unnamed protein product [Homo sapiens]
gi|208967244|dbj|BAG73636.1| RAB8B, member RAS oncogene family [synthetic construct]
gi|312151528|gb|ADQ32276.1| RAB8B, member RAS oncogene family [synthetic construct]
gi|355692780|gb|EHH27383.1| Ras-related protein Rab-8B [Macaca mulatta]
gi|380784677|gb|AFE64214.1| ras-related protein Rab-8B [Macaca mulatta]
gi|383419143|gb|AFH32785.1| ras-related protein Rab-8B [Macaca mulatta]
gi|384947648|gb|AFI37429.1| ras-related protein Rab-8B [Macaca mulatta]
gi|410217818|gb|JAA06128.1| RAB8B, member RAS oncogene family [Pan troglodytes]
gi|410263584|gb|JAA19758.1| RAB8B, member RAS oncogene family [Pan troglodytes]
gi|410300636|gb|JAA28918.1| RAB8B, member RAS oncogene family [Pan troglodytes]
gi|410332985|gb|JAA35439.1| RAB8B, member RAS oncogene family [Pan troglodytes]
Length = 207
Score = 86.7 bits (213), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 84/159 (52%), Gaps = 3/159 (1%)
Query: 48 DSFEAAHSWKMKVSIK-RTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFS 106
D+F + + K RTI E +G++++L +WDTAGQE F IT AYYRGA ++ +
Sbjct: 31 DAFNTTFISTIGIDFKIRTI-ELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYD 89
Query: 107 TIDRDSFEAAHSWKMKV-ENECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMR 165
+ SF+ +W + E+ ++ +++ NK D+ D+ V+ E + L+ G + +
Sbjct: 90 ITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCDMNDKRQVSKERGEKLAIDYGIKFLE 149
Query: 166 TSVKEDINVNSIFRYLTTKCLSELRQQEEEYSINGNGLP 204
TS K NV F L +++L ++ + + G G P
Sbjct: 150 TSAKSSANVEEAFFTLARDIMTKLNRKMNDSNSAGAGGP 188
>gi|49522647|gb|AAH71176.1| Rab8a protein, partial [Rattus norvegicus]
Length = 206
Score = 86.7 bits (213), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 82/155 (52%), Gaps = 1/155 (0%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
D+F + + + K E +G+ ++L +WDTAGQE F IT AYYRGA ++ +
Sbjct: 30 DAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDI 89
Query: 108 IDRDSFEAAHSWKMKV-ENECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
+ SF+ +W + E+ ++ +++ NK D+ D+ V+ E + L+ G + M T
Sbjct: 90 TNEKSFDNIRNWIRNIEEHASADVEKMILGNKCDVNDKRQVSKERGEKLALDYGIKFMET 149
Query: 167 SVKEDINVNSIFRYLTTKCLSELRQQEEEYSINGN 201
S K +INV + F L +++ ++ E S G+
Sbjct: 150 SAKANINVENAFFTLARDIKAKMDKKLEGNSPQGS 184
>gi|197101924|ref|NP_001127003.1| ras-related protein Rab-8A [Pongo abelii]
gi|75070428|sp|Q5R4A3.1|RAB8A_PONAB RecName: Full=Ras-related protein Rab-8A; Flags: Precursor
gi|55733469|emb|CAH93413.1| hypothetical protein [Pongo abelii]
Length = 207
Score = 86.7 bits (213), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 85/156 (54%), Gaps = 3/156 (1%)
Query: 48 DSFEAAHSWKMKVSIK-RTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFS 106
D+F + + + K RTI E +G+ ++L +WDTAGQE F IT AYYRGA ++ +
Sbjct: 31 DAFNSTFISTIGIDFKIRTI-ELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYD 89
Query: 107 TIDRDSFEAAHSWKMKV-ENECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMR 165
+ SF+ +W + E+ ++ +++ NK D+ D+ V+ E + L+ G + M
Sbjct: 90 ITNEKSFDNIRNWIRNIEEHASADVEKMILGNKRDVNDKRQVSKERGEKLALDYGIKFME 149
Query: 166 TSVKEDINVNSIFRYLTTKCLSELRQQEEEYSINGN 201
TS K +INV + F L +++ ++ E S G+
Sbjct: 150 TSAKANINVENAFFTLARDIKAKMDKKLEGNSPQGS 185
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 32/51 (62%)
Query: 6 CEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
+G+ ++L +WDTAGQE F IT AYYRGA ++ + + SF+ +W
Sbjct: 52 LDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNW 102
>gi|297599697|ref|NP_001047606.2| Os02g0653800 [Oryza sativa Japonica Group]
gi|14140133|emb|CAC39050.1| putative GTP-binding protein [Oryza sativa]
gi|49387522|dbj|BAD24987.1| putative GTP-binding protein YPTM2 [Oryza sativa Japonica Group]
gi|215769313|dbj|BAH01542.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222623360|gb|EEE57492.1| hypothetical protein OsJ_07768 [Oryza sativa Japonica Group]
gi|255671140|dbj|BAF09520.2| Os02g0653800 [Oryza sativa Japonica Group]
Length = 203
Score = 86.7 bits (213), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 74/159 (46%), Gaps = 5/159 (3%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
DS+ ++ + V K E +G+ ++L +WDTAGQE F IT +YYRGA +I +
Sbjct: 31 DSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDV 90
Query: 108 IDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
D++SF W +++ + + +LV NK DL VV+ E A + +G M T
Sbjct: 91 TDQESFNNVKQWLNEIDRYASDNVNKLLVGNKSDLTANKVVSSETAKAFADEMGIPFMET 150
Query: 167 SVKEDINVNSIFRYLTTKCLSELRQQEEEYSINGNGLPP 205
S K NV F + + Q N PP
Sbjct: 151 SAKNATNVEQAFMAMAASIKDRMASQPAA----ANARPP 185
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 32/50 (64%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
+G+ ++L +WDTAGQE F IT +YYRGA +I + D++SF W
Sbjct: 53 DGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQW 102
>gi|57101400|ref|XP_533913.1| PREDICTED: ras-related protein Rab-3D [Canis lupus familiaris]
Length = 219
Score = 86.7 bits (213), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 77/160 (48%), Gaps = 2/160 (1%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
DSF A + + K + ++L +WDTAGQE + IT AYYRGA ++ +
Sbjct: 45 DSFTPAFVSTVGIDFKVKTVYRHDKRIKLQIWDTAGQERYRTITTAYYRGAMGFLLMYDV 104
Query: 108 IDRDSFEAAHSWKMKVENEC-GEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
+++SF A W +++ +LV NK DL D+ VV E+ L+ LG
Sbjct: 105 ANQESFAAVQDWATQIKTYSWDNAQVILVGNKCDLEDERVVPTEDGRRLADDLGFEFFEA 164
Query: 167 SVKEDINVNSIFRYLTTKCLSELRQQEEEYSING-NGLPP 205
S KE+INV +F L ++ + E S G NG P
Sbjct: 165 SAKENINVKQVFERLVDIICEKMNESLEPSSSPGSNGKGP 204
>gi|47222415|emb|CAG12935.1| unnamed protein product [Tetraodon nigroviridis]
Length = 200
Score = 86.7 bits (213), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 80/160 (50%), Gaps = 3/160 (1%)
Query: 35 AQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAY 94
+ CV+ F D D+F + + K E +G++++L +WDTAGQE F IT +Y
Sbjct: 21 GKTCVL-FRFSD-DAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQERFHTITTSY 78
Query: 95 YRGAQACVITFSTIDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEAD 153
YRGA ++ + + SFE W ++ E + +L+ NK D+ D+ VV + +
Sbjct: 79 YRGAMGIMLVYDITNAKSFENISKWLRNIDEHANEDVERMLLGNKCDMEDKRVVPKAKGE 138
Query: 154 LLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSELRQQE 193
++R G R TS K +IN+ F L L + +E
Sbjct: 139 QIAREHGIRFFETSAKANINIEKAFLTLAEDILKKTPVKE 178
>gi|340503956|gb|EGR30455.1| Ras family protein, putative [Ichthyophthirius multifiliis]
Length = 198
Score = 86.7 bits (213), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 91/177 (51%), Gaps = 19/177 (10%)
Query: 21 QEEFDAITKAYYRG----AQACVI------TFSTIDRDSFEAAHSWKMKVSIKRTIKECE 70
++++DAI K G + CV+ TF+ ++ + + K + E +
Sbjct: 4 KQDYDAILKFLVIGDSGVGKTCVLLNYCEGTFTNVNLTTIGIDYKLKQE--------EID 55
Query: 71 GEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV-ENECGE 129
G+ V+L +WDTAGQE F IT YY+GA ++ +S ID +SF+ W ++ E+ +
Sbjct: 56 GKRVKLQIWDTAGQERFKTITVNYYKGAAGIILAYSVIDPNSFKNIIDWMKQINEHANAD 115
Query: 130 IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCL 186
+ +++ NK D+ ++ V+ +E + L+ G + TS K NV+ F+Y+ L
Sbjct: 116 VKKIIIANKCDMKEERKVSQKEGEDLAEKYGVKYFETSAKSGQNVSDAFKYIAKLAL 172
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 36/55 (65%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVS 61
+G+ V+L +WDTAGQE F IT YY+GA ++ +S ID +SF+ W +++
Sbjct: 55 DGKRVKLQIWDTAGQERFKTITVNYYKGAAGIILAYSVIDPNSFKNIIDWMKQIN 109
>gi|344235947|gb|EGV92050.1| Ras-related protein Rab-3C [Cricetulus griseus]
Length = 220
Score = 86.7 bits (213), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 89/182 (48%), Gaps = 7/182 (3%)
Query: 5 ICEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVIT---FSTIDRDSFEAAHSWKMKVS 61
+ ++ R D++ + FD + K G + T F D DSF +A + +
Sbjct: 1 MASAQDARFGQKDSSSDQNFDYMFKLLIIGNSSVGKTSFLFRYAD-DSFTSAFVSTVGID 59
Query: 62 IK-RTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWK 120
K +T+ + E + ++L +WDTAGQE + IT AYYRGA ++ + + +SF A W
Sbjct: 60 FKVKTVFKNE-KRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWS 118
Query: 121 MKVENEC-GEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFR 179
+++ +LV NK D+ D+ +++ E L LG TS K++INV F
Sbjct: 119 TQIKTYSWDNAQVILVGNKCDMEDERIISTERGQHLGEQLGFEFFETSAKDNINVKQTFE 178
Query: 180 YL 181
L
Sbjct: 179 RL 180
>gi|145509483|ref|XP_001440680.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834542|emb|CAI44578.1| rab_A11 [Paramecium tetraurelia]
gi|124407908|emb|CAK73283.1| unnamed protein product [Paramecium tetraurelia]
Length = 208
Score = 86.7 bits (213), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 79/160 (49%), Gaps = 2/160 (1%)
Query: 50 FEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTID 109
F + + V K E ++++L +WDTAGQE F IT+ YY+GA + +S +D
Sbjct: 34 FSQNYMATIGVDFKIKTITVEDKKIKLQIWDTAGQERFRNITQTYYKGAFGIIFVYSIVD 93
Query: 110 RDSFEAAHSW-KMKVENECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSV 168
R+SF +W K EN E+ ++LV NK+D D+ V + E L+ + TS
Sbjct: 94 RNSFNNVETWIKSITENTTDEVCSILVGNKMDSQDRRVQS-SEGQALATKYKMPFIETSA 152
Query: 169 KEDINVNSIFRYLTTKCLSELRQQEEEYSINGNGLPPYTI 208
E+ N+ +IF L L + ++ N G P + I
Sbjct: 153 LENKNIQNIFDILGLNLKKRLENESQKPQANPEGKPTFQI 192
Score = 60.1 bits (144), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 39/63 (61%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVSIKRTI 66
E ++++L +WDTAGQE F IT+ YY+GA + +S +DR+SF +W ++ T
Sbjct: 54 EDKKIKLQIWDTAGQERFRNITQTYYKGAFGIIFVYSIVDRNSFNNVETWIKSITENTTD 113
Query: 67 KEC 69
+ C
Sbjct: 114 EVC 116
>gi|61676643|gb|AAX51845.1| Rab-type small GTP-binding protein [Paxillus involutus]
Length = 210
Score = 86.7 bits (213), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 46/127 (36%), Positives = 66/127 (51%), Gaps = 2/127 (1%)
Query: 64 RTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 123
RTI E +G+ ++L +WDTAGQE F IT AYYRGA ++ + D SF +W +
Sbjct: 49 RTI-ELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRTWHANI 107
Query: 124 ENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLT 182
E + + +L+ NK D D+ V ++ L+ LG R M TS K + V F L
Sbjct: 108 EQHASDGVNKILIGNKSDWTDKRAVTEDQGRELANELGIRFMETSAKVNDGVEDAFFTLA 167
Query: 183 TKCLSEL 189
C + L
Sbjct: 168 RDCKTRL 174
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 32/54 (59%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 60
+G+ ++L +WDTAGQE F IT AYYRGA ++ + D SF +W +
Sbjct: 54 DGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRTWHANI 107
>gi|410950474|ref|XP_003981930.1| PREDICTED: ras-related protein Rab-3D [Felis catus]
Length = 219
Score = 86.7 bits (213), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 77/160 (48%), Gaps = 2/160 (1%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
DSF A + + K + ++L +WDTAGQE + IT AYYRGA ++ +
Sbjct: 45 DSFTPAFVSTVGIDFKVKTVYRHDKRIKLQIWDTAGQERYRTITTAYYRGAMGFLLMYDV 104
Query: 108 IDRDSFEAAHSWKMKVENEC-GEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
+++SF A W +++ +LV NK DL D+ VV E+ L+ LG
Sbjct: 105 ANQESFTAVQDWATQIKTYSWDNAQVILVGNKCDLEDERVVPTEDGRRLADDLGFEFFEA 164
Query: 167 SVKEDINVNSIFRYLTTKCLSELRQQEEEYSING-NGLPP 205
S KE+INV +F L ++ + E S G NG P
Sbjct: 165 SAKENINVKQVFERLVDVICEKMNESLEPSSGPGSNGKGP 204
>gi|449458327|ref|XP_004146899.1| PREDICTED: ras-related protein RABD2a-like [Cucumis sativus]
gi|449519234|ref|XP_004166640.1| PREDICTED: ras-related protein RABD2a-like [Cucumis sativus]
Length = 201
Score = 86.7 bits (213), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 80/159 (50%), Gaps = 7/159 (4%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
DS+ ++ + V K E +G+ ++L +WDTAGQE F IT +YYRGA +I +
Sbjct: 31 DSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDV 90
Query: 108 IDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
D++SFE W +++ E + +LV NK DL +++ V+ E A + +G M T
Sbjct: 91 TDQESFENVKQWLNEIDRYASENVNKLLVGNKCDLPNRA-VSYESAKAFADEVGIPFMET 149
Query: 167 SVKEDINVNSIFRYLTTKCLSELRQQEEEYSINGNGLPP 205
S K+ NV F +T + + Q N PP
Sbjct: 150 SAKDATNVEQAFMAMTADIKNRMASQPAN-----NARPP 183
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 33/50 (66%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
+G+ ++L +WDTAGQE F IT +YYRGA +I + D++SFE W
Sbjct: 53 DGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFENVKQW 102
>gi|348556994|ref|XP_003464305.1| PREDICTED: ras-related protein Rab-8A-like [Cavia porcellus]
Length = 207
Score = 86.7 bits (213), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 82/155 (52%), Gaps = 1/155 (0%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
D+F + + + K E +G+ ++L +WDTAGQE F IT AYYRGA ++ +
Sbjct: 31 DAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDI 90
Query: 108 IDRDSFEAAHSWKMKV-ENECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
+ SF+ +W + E+ ++ +++ NK D+ D+ V+ E + L+ G + M T
Sbjct: 91 TNEKSFDNIRNWIRNIEEHASADVEKMVLGNKCDVNDKRQVSKERGEKLALDYGIKFMET 150
Query: 167 SVKEDINVNSIFRYLTTKCLSELRQQEEEYSINGN 201
S K +INV + F L +++ ++ E S G+
Sbjct: 151 SAKANINVENAFFTLARDIKAKMDKKLEGNSPQGS 185
>gi|15042957|ref|NP_114080.2| ras-related protein Rab-3D [Mus musculus]
gi|464569|sp|P35276.1|RAB3D_MOUSE RecName: Full=Ras-related protein Rab-3D
gi|9082184|gb|AAF82769.1|AF263365_1 Rab3D [Mus musculus]
gi|9082186|gb|AAF82770.1|AF263366_1 Rab3D [Mus musculus]
gi|200632|gb|AAA40026.1| GTP-binding protein [Mus musculus]
gi|14789745|gb|AAH10779.1| Rab3d protein [Mus musculus]
gi|18042808|gb|AAH20010.1| Rab3d protein [Mus musculus]
gi|26339304|dbj|BAC33323.1| unnamed protein product [Mus musculus]
gi|74142115|dbj|BAE41117.1| unnamed protein product [Mus musculus]
gi|112292949|dbj|BAF02852.1| Rab3D [Mus musculus]
gi|148693272|gb|EDL25219.1| RAB3D, member RAS oncogene family, isoform CRA_a [Mus musculus]
gi|148693273|gb|EDL25220.1| RAB3D, member RAS oncogene family, isoform CRA_a [Mus musculus]
gi|148693274|gb|EDL25221.1| RAB3D, member RAS oncogene family, isoform CRA_a [Mus musculus]
gi|148693275|gb|EDL25222.1| RAB3D, member RAS oncogene family, isoform CRA_a [Mus musculus]
gi|148693277|gb|EDL25224.1| RAB3D, member RAS oncogene family, isoform CRA_a [Mus musculus]
Length = 219
Score = 86.7 bits (213), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 77/160 (48%), Gaps = 2/160 (1%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
DSF A + + K + ++L +WDTAGQE + IT AYYRGA ++ +
Sbjct: 45 DSFTPAFVSTVGIDFKVKTVYRHDKRIKLQIWDTAGQERYRTITTAYYRGAMGFLLMYDI 104
Query: 108 IDRDSFEAAHSWKMKVENEC-GEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
+++SF A W +++ +LV NK DL D+ VV E+ L+ LG
Sbjct: 105 ANQESFTAVQDWATQIKTYSWDNAQVILVGNKCDLEDERVVPAEDGRRLADDLGFEFFEA 164
Query: 167 SVKEDINVNSIFRYLTTKCLSELRQQEEEYSING-NGLPP 205
S KE+INV +F L ++ + E S G NG P
Sbjct: 165 SAKENINVKQVFERLVDIICDKMNESLEPSSSPGSNGKGP 204
>gi|58261356|ref|XP_568088.1| ras-related protein ypt1 [Cryptococcus neoformans var. neoformans
JEC21]
gi|134115607|ref|XP_773517.1| hypothetical protein CNBI1310 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50256143|gb|EAL18870.1| hypothetical protein CNBI1310 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57230170|gb|AAW46571.1| ras-related protein ypt1, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 205
Score = 86.7 bits (213), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 68/132 (51%), Gaps = 1/132 (0%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
D++ ++ + V K E EG+ V+L +WDTAGQE F IT +YYRGA ++ +
Sbjct: 32 DTYTESYISTIGVDFKIRTIELEGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDV 91
Query: 108 IDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
DRD++ W +++ E + +LV NK DL + VV EA + LG + T
Sbjct: 92 TDRDTYTNVKQWLQEIDRYAVEGVNKLLVGNKSDLATKKVVEYAEAKSFADELGIPFLET 151
Query: 167 SVKEDINVNSIF 178
S K NV F
Sbjct: 152 SAKNATNVEQAF 163
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 32/50 (64%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
EG+ V+L +WDTAGQE F IT +YYRGA ++ + DRD++ W
Sbjct: 54 EGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDRDTYTNVKQW 103
>gi|154343265|ref|XP_001567578.1| putative ras-related protein rab-2a [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134064910|emb|CAM43019.1| putative ras-related protein rab-2a [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 212
Score = 86.7 bits (213), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 67/130 (51%), Gaps = 1/130 (0%)
Query: 50 FEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTID 109
FE H + V + +G V+L +WDTAGQE F +IT++YYRGA ++ +
Sbjct: 32 FEPLHDLTIGVEFGARLISIQGRSVKLQIWDTAGQESFRSITRSYYRGASGALLVYDVTR 91
Query: 110 RDSFEAAHSWKMKVE-NECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSV 168
RD+F SW + N + +L+ NK DL + V+ EE + +R+ G M TS
Sbjct: 92 RDTFTHLQSWLEDAKANANTALVIMLIGNKCDLDSKRQVSREEGEAFARSNGLMFMETSA 151
Query: 169 KEDINVNSIF 178
K NV+ F
Sbjct: 152 KTSKNVDDAF 161
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 33/50 (66%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
+G V+L +WDTAGQE F +IT++YYRGA ++ + RD+F SW
Sbjct: 52 QGRSVKLQIWDTAGQESFRSITRSYYRGASGALLVYDVTRRDTFTHLQSW 101
>gi|410916971|ref|XP_003971960.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein Rab-10-like
[Takifugu rubripes]
Length = 201
Score = 86.7 bits (213), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 80/160 (50%), Gaps = 3/160 (1%)
Query: 35 AQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAY 94
+ CV+ F D D+F + + K E +G++++L +WDTAGQE F IT +Y
Sbjct: 21 GKTCVL-FRFSD-DAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQERFHTITTSY 78
Query: 95 YRGAQACVITFSTIDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEAD 153
YRGA ++ + + SFE W ++ E + +L+ NK D+ D+ VV + +
Sbjct: 79 YRGAMGIMLVYDITNAKSFENISKWLRNIDEHANEDVERMLLGNKCDMEDKRVVPKAKGE 138
Query: 154 LLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSELRQQE 193
++R G R TS K +IN+ F L L + +E
Sbjct: 139 QIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVKE 178
>gi|348517548|ref|XP_003446295.1| PREDICTED: ras-related protein Rab-10-like [Oreochromis niloticus]
Length = 201
Score = 86.7 bits (213), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 80/160 (50%), Gaps = 3/160 (1%)
Query: 35 AQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAY 94
+ CV+ F D D+F + + K E +G++++L +WDTAGQE F IT +Y
Sbjct: 21 GKTCVL-FRFSD-DAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQERFHTITTSY 78
Query: 95 YRGAQACVITFSTIDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEAD 153
YRGA ++ + + SFE W ++ E + +L+ NK D+ D+ VV + +
Sbjct: 79 YRGAMGIMLVYDITNAKSFENISKWLRNIDEHANEDVERMLLGNKCDMEDKRVVPKAKGE 138
Query: 154 LLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSELRQQE 193
++R G R TS K +IN+ F L L + +E
Sbjct: 139 QIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVKE 178
>gi|115434888|ref|NP_001042202.1| Os01g0179700 [Oryza sativa Japonica Group]
gi|113531733|dbj|BAF04116.1| Os01g0179700 [Oryza sativa Japonica Group]
gi|125524668|gb|EAY72782.1| hypothetical protein OsI_00645 [Oryza sativa Indica Group]
gi|125569264|gb|EAZ10779.1| hypothetical protein OsJ_00614 [Oryza sativa Japonica Group]
gi|215697672|dbj|BAG91666.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215765495|dbj|BAG87192.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 203
Score = 86.7 bits (213), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 74/159 (46%), Gaps = 5/159 (3%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
DS+ ++ + V K E +G+ ++L +WDTAGQE F IT +YYRGA +I +
Sbjct: 31 DSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDV 90
Query: 108 IDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
D++SF W +++ + + +LV NK DL VV+ E A + +G M T
Sbjct: 91 TDQESFNNVKQWLNEIDRYASDNVNKLLVGNKSDLTANKVVSSETAKAFADEMGIPFMET 150
Query: 167 SVKEDINVNSIFRYLTTKCLSELRQQEEEYSINGNGLPP 205
S K NV F + + Q N PP
Sbjct: 151 SAKNATNVEQAFMAMAASIKDRMASQPAA----SNARPP 185
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 32/50 (64%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
+G+ ++L +WDTAGQE F IT +YYRGA +I + D++SF W
Sbjct: 53 DGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQW 102
>gi|195131053|ref|XP_002009965.1| GI14949 [Drosophila mojavensis]
gi|193908415|gb|EDW07282.1| GI14949 [Drosophila mojavensis]
Length = 222
Score = 86.7 bits (213), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 81/153 (52%), Gaps = 5/153 (3%)
Query: 35 AQACVITFSTIDR---DSFEAAHSWKMKVS-IKRTIKECEGEEVRLMLWDTAGQEEFDAI 90
+ CV S + R D F H ++ S + + + + +L +WDTAGQE F A+
Sbjct: 20 GEGCVGKTSLVLRYMEDKFNTQHLSTLQASFVTKKVTLPDERRAQLNIWDTAGQERFHAL 79
Query: 91 TKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENECG-EIPTVLVQNKIDLLDQSVVAP 149
YYRG+ ++ + D+DSF+ SW +++ G EI ++V NK DL +Q ++
Sbjct: 80 GPIYYRGSDGALLVYDITDQDSFQKVKSWVRELKQMRGSEIALIIVGNKTDLEEQRAISY 139
Query: 150 EEADLLSRALGCRLMRTSVKEDINVNSIFRYLT 182
E A ++ +G + + TS KE+ VN +F LT
Sbjct: 140 ETALRYAQTVGAQYVETSAKENDGVNELFELLT 172
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 39/67 (58%), Gaps = 6/67 (8%)
Query: 12 RLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEG 71
+L +WDTAGQE F A+ YYRG+ ++ + D+DSF+ SW R +K+ G
Sbjct: 64 QLNIWDTAGQERFHALGPIYYRGSDGALLVYDITDQDSFQKVKSW------VRELKQMRG 117
Query: 72 EEVRLML 78
E+ L++
Sbjct: 118 SEIALII 124
>gi|126303044|ref|XP_001370866.1| PREDICTED: ras-related protein Rab-10-like [Monodelphis domestica]
Length = 200
Score = 86.7 bits (213), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 80/160 (50%), Gaps = 3/160 (1%)
Query: 35 AQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAY 94
+ CV+ F D D+F + + K E +G++++L +WDTAGQE F IT +Y
Sbjct: 21 GKTCVL-FRFSD-DAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQERFHTITTSY 78
Query: 95 YRGAQACVITFSTIDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEAD 153
YRGA ++ + + SFE W ++ E + +L+ NK D+ D+ VV + +
Sbjct: 79 YRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKCDMEDKRVVPKGKGE 138
Query: 154 LLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSELRQQE 193
++R G R TS K +IN+ F L L + +E
Sbjct: 139 QIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVKE 178
>gi|145488569|ref|XP_001430288.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74831445|emb|CAI39307.1| rab_C39 [Paramecium tetraurelia]
gi|124397385|emb|CAK62890.1| unnamed protein product [Paramecium tetraurelia]
Length = 210
Score = 86.7 bits (213), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 68/123 (55%), Gaps = 1/123 (0%)
Query: 72 EEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVEN-ECGEI 130
+ V L +WDTAGQE F ++T+++YRGA ++ F R SF+ W K+++ C EI
Sbjct: 50 QNVNLHIWDTAGQESFRSLTRSFYRGAIGGILVFDVTSRQSFQGLVQWYEKIQSYACDEI 109
Query: 131 PTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSELR 190
++V NK DL +Q V+ +E ++ TS K +NVN +F L+ K L ++
Sbjct: 110 ELIIVGNKTDLEEQRQVSQKEGMQFAKQYNFEYFETSAKTGLNVNQVFENLSCKILQKVN 169
Query: 191 QQE 193
E
Sbjct: 170 SGE 172
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 32/52 (61%)
Query: 9 EEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 60
+ V L +WDTAGQE F ++T+++YRGA ++ F R SF+ W K+
Sbjct: 50 QNVNLHIWDTAGQESFRSLTRSFYRGAIGGILVFDVTSRQSFQGLVQWYEKI 101
>gi|240849281|ref|NP_001155333.1| ras-related protein Rab-10 [Ovis aries]
gi|238566728|gb|ACR46624.1| RAB10 [Ovis aries]
Length = 200
Score = 86.7 bits (213), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 80/160 (50%), Gaps = 3/160 (1%)
Query: 35 AQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAY 94
+ CV+ F D D+F + + K E +G++++L +WDTAGQE F IT +Y
Sbjct: 21 GKTCVL-FRFSD-DAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQERFHTITTSY 78
Query: 95 YRGAQACVITFSTIDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEAD 153
YRGA ++ + + SFE W ++ E + +L+ NK D+ D+ VV + +
Sbjct: 79 YRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKCDMDDKRVVPKGKGE 138
Query: 154 LLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSELRQQE 193
++R G R TS K +IN+ F L L + +E
Sbjct: 139 QIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVKE 178
>gi|27696356|gb|AAH43857.1| Rab3d protein, partial [Xenopus laevis]
Length = 246
Score = 86.7 bits (213), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 81/157 (51%), Gaps = 3/157 (1%)
Query: 48 DSFEAAHSWKMKVSIK-RTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFS 106
DSF +A + + K +T+ E + V+L +WDTAGQE + IT AYYRGA ++ +
Sbjct: 74 DSFTSAFVSTVGIDFKVKTVYRNE-KRVKLQIWDTAGQERYRTITTAYYRGAMGFLLMYD 132
Query: 107 TIDRDSFEAAHSWKMKVENECGEIPTV-LVQNKIDLLDQSVVAPEEADLLSRALGCRLMR 165
+ +SF A W +++ + V LV NK DL D V+A E+ L+ LG
Sbjct: 133 ISNLESFNAVQDWATQIKTYSWDNAQVLLVGNKCDLEDDRVIAAEDGRKLAEELGFEFFE 192
Query: 166 TSVKEDINVNSIFRYLTTKCLSELRQQEEEYSINGNG 202
S K++INV +F L ++ + E + G+G
Sbjct: 193 ASAKDNINVKQVFERLVDIICEKMNESLENGPVPGSG 229
>gi|7710086|ref|NP_057885.1| ras-related protein Rab-10 [Mus musculus]
gi|61889071|ref|NP_059055.2| ras-related protein Rab-10 [Rattus norvegicus]
gi|155372291|ref|NP_001094758.1| ras-related protein Rab-10 [Bos taurus]
gi|197099764|ref|NP_001126682.1| ras-related protein Rab-10 [Pongo abelii]
gi|256222019|ref|NP_057215.3| ras-related protein Rab-10 [Homo sapiens]
gi|311771751|ref|NP_001003277.2| ras-related protein Rab-10 [Canis lupus familiaris]
gi|340007402|ref|NP_001229989.1| RAB10, member RAS oncogene family [Sus scrofa]
gi|114576514|ref|XP_525714.2| PREDICTED: ras-related protein Rab-10 isoform 4 [Pan troglodytes]
gi|149727712|ref|XP_001502863.1| PREDICTED: ras-related protein Rab-10-like [Equus caballus]
gi|291387085|ref|XP_002710022.1| PREDICTED: RAB10, member RAS oncogene family-like [Oryctolagus
cuniculus]
gi|296224339|ref|XP_002758008.1| PREDICTED: ras-related protein Rab-10-like [Callithrix jacchus]
gi|301756020|ref|XP_002913834.1| PREDICTED: ras-related protein Rab-10-like [Ailuropoda melanoleuca]
gi|332242957|ref|XP_003270648.1| PREDICTED: ras-related protein Rab-10 isoform 1 [Nomascus
leucogenys]
gi|344280395|ref|XP_003411969.1| PREDICTED: ras-related protein Rab-10-like [Loxodonta africana]
gi|395828684|ref|XP_003787497.1| PREDICTED: ras-related protein Rab-10 [Otolemur garnettii]
gi|397513606|ref|XP_003827102.1| PREDICTED: ras-related protein Rab-10-like [Pan paniscus]
gi|403288243|ref|XP_003935319.1| PREDICTED: ras-related protein Rab-10-like [Saimiri boliviensis
boliviensis]
gi|410955664|ref|XP_003984471.1| PREDICTED: ras-related protein Rab-10 [Felis catus]
gi|426334961|ref|XP_004029003.1| PREDICTED: ras-related protein Rab-10-like [Gorilla gorilla
gorilla]
gi|46577638|sp|P61026.1|RAB10_HUMAN RecName: Full=Ras-related protein Rab-10
gi|46577639|sp|P61027.1|RAB10_MOUSE RecName: Full=Ras-related protein Rab-10
gi|75070495|sp|Q5R5U1.1|RAB10_PONAB RecName: Full=Ras-related protein Rab-10
gi|10121882|gb|AAG13413.1|AF297660_1 RAB10 [Homo sapiens]
gi|20379066|gb|AAM21093.1|AF498945_1 small GTP binding protein RAB10 [Homo sapiens]
gi|33150538|gb|AAP97147.1|AF086917_1 rab10 [Homo sapiens]
gi|3406428|gb|AAC29313.1| Rab10 [Mus musculus]
gi|5410328|gb|AAD43034.1| ras-related GTP-binding protein [Homo sapiens]
gi|10435058|dbj|BAB14474.1| unnamed protein product [Homo sapiens]
gi|12654157|gb|AAH00896.1| RAB10, member RAS oncogene family [Homo sapiens]
gi|26352864|dbj|BAC40062.1| unnamed protein product [Mus musculus]
gi|26390320|dbj|BAC25878.1| unnamed protein product [Mus musculus]
gi|33989422|gb|AAH56374.1| RAB10, member RAS oncogene family [Mus musculus]
gi|48146723|emb|CAG33584.1| RAB10 [Homo sapiens]
gi|55715653|gb|AAH85744.1| RAB10, member RAS oncogene family [Rattus norvegicus]
gi|55732345|emb|CAH92875.1| hypothetical protein [Pongo abelii]
gi|71060115|emb|CAJ18601.1| Rab10 [Mus musculus]
gi|74142264|dbj|BAE31896.1| unnamed protein product [Mus musculus]
gi|74144564|dbj|BAE36116.1| unnamed protein product [Mus musculus]
gi|74149126|dbj|BAE22371.1| unnamed protein product [Mus musculus]
gi|74195726|dbj|BAE30429.1| unnamed protein product [Mus musculus]
gi|74196963|dbj|BAE35038.1| unnamed protein product [Mus musculus]
gi|74204709|dbj|BAE35423.1| unnamed protein product [Mus musculus]
gi|74212200|dbj|BAE40259.1| unnamed protein product [Mus musculus]
gi|74213449|dbj|BAE35538.1| unnamed protein product [Mus musculus]
gi|74214105|dbj|BAE29464.1| unnamed protein product [Mus musculus]
gi|74219481|dbj|BAE29515.1| unnamed protein product [Mus musculus]
gi|74226932|dbj|BAE27109.1| unnamed protein product [Mus musculus]
gi|112292977|dbj|BAF02866.1| Rab10 [Mus musculus]
gi|119621115|gb|EAX00710.1| RAB10, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|119621116|gb|EAX00711.1| RAB10, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|148669455|gb|EDL01402.1| RAB10, member RAS oncogene family [Mus musculus]
gi|149050831|gb|EDM03004.1| RAB10, member RAS oncogene family, isoform CRA_a [Rattus
norvegicus]
gi|151556300|gb|AAI48074.1| RAB10 protein [Bos taurus]
gi|261861502|dbj|BAI47273.1| RAB10, member RAS oncogene family [synthetic construct]
gi|281344975|gb|EFB20559.1| hypothetical protein PANDA_001688 [Ailuropoda melanoleuca]
gi|296482330|tpg|DAA24445.1| TPA: ras-related GTP-binding protein RAB10 [Bos taurus]
gi|312151766|gb|ADQ32395.1| RAB10, member RAS oncogene family [synthetic construct]
gi|351715996|gb|EHB18915.1| Ras-related protein Rab-10 [Heterocephalus glaber]
gi|355565524|gb|EHH21953.1| hypothetical protein EGK_05128 [Macaca mulatta]
gi|355751171|gb|EHH55426.1| hypothetical protein EGM_04635 [Macaca fascicularis]
gi|380783957|gb|AFE63854.1| ras-related protein Rab-10 [Macaca mulatta]
gi|383409653|gb|AFH28040.1| ras-related protein Rab-10 [Macaca mulatta]
gi|384942192|gb|AFI34701.1| ras-related protein Rab-10 [Macaca mulatta]
gi|410267930|gb|JAA21931.1| RAB10, member RAS oncogene family [Pan troglodytes]
gi|410350797|gb|JAA42002.1| RAB10, member RAS oncogene family [Pan troglodytes]
gi|432096825|gb|ELK27403.1| Ras-related protein Rab-10 [Myotis davidii]
gi|440906101|gb|ELR56406.1| Ras-related protein Rab-10 [Bos grunniens mutus]
Length = 200
Score = 86.7 bits (213), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 80/160 (50%), Gaps = 3/160 (1%)
Query: 35 AQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAY 94
+ CV+ F D D+F + + K E +G++++L +WDTAGQE F IT +Y
Sbjct: 21 GKTCVL-FRFSD-DAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQERFHTITTSY 78
Query: 95 YRGAQACVITFSTIDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEAD 153
YRGA ++ + + SFE W ++ E + +L+ NK D+ D+ VV + +
Sbjct: 79 YRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKCDMDDKRVVPKGKGE 138
Query: 154 LLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSELRQQE 193
++R G R TS K +IN+ F L L + +E
Sbjct: 139 QIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVKE 178
>gi|328855882|gb|EGG05006.1| hypothetical protein MELLADRAFT_37102 [Melampsora larici-populina
98AG31]
Length = 209
Score = 86.3 bits (212), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 69/135 (51%), Gaps = 1/135 (0%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
D++ + + + K E +G+ ++L +WDTAGQE F IT AYYRGA ++ +
Sbjct: 33 DAYTPSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDV 92
Query: 108 IDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
D SF +W ++ E + +L+ NK D D+ V++ E+ L+ LG M T
Sbjct: 93 TDDKSFTNIRTWHSNIDQHASEGVNKILLGNKCDSTDKKVISEEQGRELATELGISFMET 152
Query: 167 SVKEDINVNSIFRYL 181
S K + NV F L
Sbjct: 153 SAKTNTNVEEAFFSL 167
>gi|162458854|ref|NP_001105441.1| GTP-binding protein YPTM2 [Zea mays]
gi|466172|sp|Q05737.1|YPTM2_MAIZE RecName: Full=GTP-binding protein YPTM2
gi|287835|emb|CAA44919.1| yptm2 [Zea mays]
Length = 203
Score = 86.3 bits (212), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 71/146 (48%), Gaps = 1/146 (0%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
DS+ ++ + V K E +G+ ++L +WDTAGQE F IT +YYRGA +I +
Sbjct: 31 DSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDV 90
Query: 108 IDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
D++SF W +++ + + +LV NK DL VVA E A + +G M T
Sbjct: 91 TDQESFNNVKQWLNEIDRYASDNVNKLLVGNKSDLTANKVVATETAKAFADEMGIPFMET 150
Query: 167 SVKEDINVNSIFRYLTTKCLSELRQQ 192
S K NV F + + Q
Sbjct: 151 SAKNATNVQQAFMAMAASIKDRMASQ 176
Score = 59.3 bits (142), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 32/50 (64%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
+G+ ++L +WDTAGQE F IT +YYRGA +I + D++SF W
Sbjct: 53 DGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQW 102
>gi|417397335|gb|JAA45701.1| Putative rab subfamily protein of small gtpase [Desmodus rotundus]
Length = 219
Score = 86.3 bits (212), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 59/189 (31%), Positives = 87/189 (46%), Gaps = 6/189 (3%)
Query: 19 AGQEEFDAITKAYYRGAQACVIT---FSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVR 75
A + FD + K G + T F D DSF A + + K + ++
Sbjct: 14 AADQNFDYMFKLLLIGNSSVGKTSFLFRYAD-DSFSPAFVSTVGIDFKVKTVYRHNKRIK 72
Query: 76 LMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENEC-GEIPTVL 134
L +WDTAGQE + IT AYYRGA ++ + +++SF A W +++ +L
Sbjct: 73 LQIWDTAGQERYRTITTAYYRGAMGFLLMYDIANQESFTAVQDWATQIKTYSWDNAQVIL 132
Query: 135 VQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSELRQQEE 194
V NK DL D+ VV E+ L+ LG S KE+INV +F L ++ + E
Sbjct: 133 VGNKCDLEDERVVLAEDGQRLANDLGFEFFEASAKENINVKQVFERLVDIICEKMNESLE 192
Query: 195 EYSING-NG 202
S G NG
Sbjct: 193 PNSNPGSNG 201
>gi|351712945|gb|EHB15864.1| Ras-related protein Rab-8A [Heterocephalus glaber]
Length = 207
Score = 86.3 bits (212), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 82/155 (52%), Gaps = 1/155 (0%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
D+F + + + K E +G+ ++L +WDTAGQE F IT AYYRGA ++ +
Sbjct: 31 DAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDI 90
Query: 108 IDRDSFEAAHSWKMKV-ENECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
+ SF+ +W + E+ ++ +++ NK D+ D+ V+ E + L+ G + M T
Sbjct: 91 TNEKSFDNIRNWIRNIEEHASADVEKMILGNKCDVNDKRQVSRERGEKLALDYGIKFMET 150
Query: 167 SVKEDINVNSIFRYLTTKCLSELRQQEEEYSINGN 201
S K +INV + F L +++ ++ E S G+
Sbjct: 151 SAKANINVENAFFTLARDIKAKMDKKLEGNSPQGS 185
>gi|145509136|ref|XP_001440512.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124407729|emb|CAK73115.1| unnamed protein product [Paramecium tetraurelia]
Length = 216
Score = 86.3 bits (212), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 73/131 (55%), Gaps = 2/131 (1%)
Query: 60 VSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 119
V K + + + V+L +WDTAGQ+ F IT +YYRGAQ +I F DR+SF W
Sbjct: 47 VDFKIKVFQIDRSTVKLQIWDTAGQDRFRTITSSYYRGAQGIIIVFDVTDRESFNQIRQW 106
Query: 120 KMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIF 178
+++ E + +LV NKID Q V+ +EA+ L+++ + TS K +IN+ + F
Sbjct: 107 IQEIDKFAAESVNKILVGNKID-SSQRRVSTDEAEALAKSYNISYIETSAKTNINIENCF 165
Query: 179 RYLTTKCLSEL 189
+T + + +
Sbjct: 166 SLITRQIIQRV 176
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 30/46 (65%)
Query: 11 VRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
V+L +WDTAGQ+ F IT +YYRGAQ +I F DR+SF W
Sbjct: 61 VKLQIWDTAGQDRFRTITSSYYRGAQGIIIVFDVTDRESFNQIRQW 106
>gi|301117468|ref|XP_002906462.1| Rab1 family GTPase (PiYpt1) [Phytophthora infestans T30-4]
gi|2500076|sp|Q01890.1|YPT1_PHYIN RecName: Full=Ras-like GTP-binding protein YPT1
gi|940432|gb|AAB40355.1| ras related protein PiYpt1 [Phytophthora infestans]
gi|262107811|gb|EEY65863.1| Rab1 family GTPase (PiYpt1) [Phytophthora infestans T30-4]
gi|348688420|gb|EGZ28234.1| hypothetical protein PHYSODRAFT_309136 [Phytophthora sojae]
Length = 201
Score = 86.3 bits (212), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 72/138 (52%), Gaps = 1/138 (0%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
D++ ++ + V K E +G+ ++L +WDTAGQE F IT +YYRGA ++ +
Sbjct: 31 DTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDV 90
Query: 108 IDRDSFEAAHSWKMKVEN-ECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
D++SF W +++ C + +LV NK DL + VV+ + A + +LG + T
Sbjct: 91 TDQESFNNVKQWLHEIDRYACENVNKLLVGNKSDLTAKRVVSTDAAKEFAESLGIEFLET 150
Query: 167 SVKEDINVNSIFRYLTTK 184
S K NV F + +
Sbjct: 151 SAKNAANVEKAFMMMAAQ 168
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 32/50 (64%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
+G+ ++L +WDTAGQE F IT +YYRGA ++ + D++SF W
Sbjct: 53 DGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQW 102
>gi|355778096|gb|EHH63132.1| Ras-related protein Rab-8B, partial [Macaca fascicularis]
Length = 171
Score = 86.3 bits (212), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 78/142 (54%), Gaps = 2/142 (1%)
Query: 64 RTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 123
RTI E +G++++L +WDTAGQE F IT AYYRGA ++ + + SF+ +W +
Sbjct: 12 RTI-ELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNI 70
Query: 124 -ENECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLT 182
E+ ++ +++ NK D+ D+ V+ E + L+ G + + TS K NV F L
Sbjct: 71 EEHASSDVERMILGNKCDMNDKRQVSKERGEKLAIDYGIKFLETSAKSSANVEEAFFTLA 130
Query: 183 TKCLSELRQQEEEYSINGNGLP 204
+++L ++ + + G G P
Sbjct: 131 RDIMTKLNRKMNDSNSAGAGGP 152
>gi|348520842|ref|XP_003447936.1| PREDICTED: ras-related protein Rab-3D-like [Oreochromis niloticus]
Length = 221
Score = 86.3 bits (212), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 77/158 (48%), Gaps = 6/158 (3%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
DSF +A + + K + V+L +WDTAGQE + IT AYYRGA ++ +
Sbjct: 47 DSFTSAFVSTVGIDFKVKTIYRNNKRVKLQIWDTAGQERYRTITTAYYRGAMGFLLMYDI 106
Query: 108 IDRDSFEAAHSWKMKVENEC-GEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
++SF A W +++ VLV NK+DL D V E+ L++ LG
Sbjct: 107 TSQESFCAVQDWATQIKTYSWDNAQVVLVANKLDLEDDRQVPTEDGKRLAKELGFHFFEA 166
Query: 167 SVKEDINVNSIFRYLTTKCLSELRQQEEEYSINGNGLP 204
S K++INV +F L ++ + S+NG+ P
Sbjct: 167 SAKDNINVKQVFDKLVDVICEKMNE-----SVNGDANP 199
>gi|145518399|ref|XP_001445075.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124412512|emb|CAK77678.1| unnamed protein product [Paramecium tetraurelia]
Length = 211
Score = 86.3 bits (212), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 44/117 (37%), Positives = 66/117 (56%), Gaps = 1/117 (0%)
Query: 72 EEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGE-I 130
V+L +WDTAGQ+ F IT +YYRGAQ +I + DR+SFE +W +++ E +
Sbjct: 57 HNVKLQIWDTAGQDRFRTITCSYYRGAQGIIIVYDITDRESFENVKTWIAEIDKYASESV 116
Query: 131 PTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLS 187
+LV NK D+ ++ V+ EE LSR TS K IN+ + F ++T L+
Sbjct: 117 NRMLVGNKADITERREVSYEEGLELSRQFQIPFYETSAKSSINIEAAFTHITKNILN 173
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 32/48 (66%)
Query: 9 EEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
V+L +WDTAGQ+ F IT +YYRGAQ +I + DR+SFE +W
Sbjct: 57 HNVKLQIWDTAGQDRFRTITCSYYRGAQGIIIVYDITDRESFENVKTW 104
>gi|351725923|ref|NP_001237621.1| uncharacterized protein LOC100499898 [Glycine max]
gi|255627505|gb|ACU14097.1| unknown [Glycine max]
Length = 201
Score = 86.3 bits (212), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 75/146 (51%), Gaps = 1/146 (0%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
DS+ ++ + V K E EG+ V+L +WDTAGQE F IT +YYRGA +I +
Sbjct: 31 DSYVDSYISTIGVDFKIRTVELEGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDV 90
Query: 108 IDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
+ +SF W +++ + + +LV NK DL+D VV A + LG + T
Sbjct: 91 TEMESFNNVKQWLNEIDRYANDSVCKLLVGNKSDLVDNKVVDSLTAKAFADELGIPFLET 150
Query: 167 SVKEDINVNSIFRYLTTKCLSELRQQ 192
S K+ I+V F +T + ++ Q
Sbjct: 151 SAKDSISVEQAFLTMTAEIKKKMGSQ 176
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 31/50 (62%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
EG+ V+L +WDTAGQE F IT +YYRGA +I + + +SF W
Sbjct: 53 EGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQW 102
>gi|353242246|emb|CCA73906.1| probable SEC4-like Rab/GTPase [Piriformospora indica DSM 11827]
Length = 208
Score = 86.3 bits (212), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 70/153 (45%), Gaps = 12/153 (7%)
Query: 64 RTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 123
RTI E +G+ ++L +WDTAGQE F IT AYYRGA ++ + D SF +W +
Sbjct: 50 RTI-ELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLIYDVTDEKSFNNIRTWHANI 108
Query: 124 ENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLT 182
E E + +L+ NK D D+ V PE+ L+ G + M TS K + V F L
Sbjct: 109 EQHASEGVNKILIGNKSDWSDKRQVTPEQGRALADEFGIKFMETSAKVNDGVEDAFFTLA 168
Query: 183 TKCLSELRQQEEEYSINGN----------GLPP 205
+ L +G G PP
Sbjct: 169 RDIKTRLIDSNPNAGTSGQSKSQDNSIKVGAPP 201
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 32/54 (59%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 60
+G+ ++L +WDTAGQE F IT AYYRGA ++ + D SF +W +
Sbjct: 55 DGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLIYDVTDEKSFNNIRTWHANI 108
>gi|343962013|dbj|BAK62594.1| ras-related protein Rab-10 [Pan troglodytes]
Length = 200
Score = 86.3 bits (212), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 80/160 (50%), Gaps = 3/160 (1%)
Query: 35 AQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAY 94
+ CV+ F D D+F + + K E +G++++L +WDTAGQE F IT +Y
Sbjct: 21 GKTCVL-FRFSD-DAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQERFHTITTSY 78
Query: 95 YRGAQACVITFSTIDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEAD 153
YRGA ++ + + SFE W ++ E + +L+ NK D+ D+ VV + +
Sbjct: 79 YRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKCDMDDKRVVPTGKGE 138
Query: 154 LLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSELRQQE 193
++R G R TS K +IN+ F L L + +E
Sbjct: 139 QIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVKE 178
>gi|195134256|ref|XP_002011553.1| GI11034 [Drosophila mojavensis]
gi|193906676|gb|EDW05543.1| GI11034 [Drosophila mojavensis]
Length = 204
Score = 86.3 bits (212), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 74/146 (50%), Gaps = 2/146 (1%)
Query: 34 GAQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKA 93
G I F D D+F + + + K E G++++L +WDTAGQE F IT +
Sbjct: 19 GVGKTCILFRFSD-DAFTSTFISTIGIDFKIKTVELRGKKIKLQIWDTAGQERFHTITTS 77
Query: 94 YYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEA 152
YYRGA ++ + + SFE W ++ E + +++ NK D+ D+ VV+ E
Sbjct: 78 YYRGAMGIMLVYDITNEKSFENIVKWLRNIDEHANEDVEKMILGNKCDMSDKRVVSKERG 137
Query: 153 DLLSRALGCRLMRTSVKEDINVNSIF 178
+ ++R R M TS K +IN+ F
Sbjct: 138 EAIAREHSIRFMETSAKSNINIERAF 163
>gi|432946632|ref|XP_004083834.1| PREDICTED: ras-related protein Rab-10-like [Oryzias latipes]
Length = 201
Score = 86.3 bits (212), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 80/160 (50%), Gaps = 3/160 (1%)
Query: 35 AQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAY 94
+ CV+ F D D+F + + K E +G++++L +WDTAGQE F IT +Y
Sbjct: 21 GKTCVL-FRFSD-DAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQERFHTITTSY 78
Query: 95 YRGAQACVITFSTIDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEAD 153
YRGA ++ + + SFE W ++ E + +L+ NK D+ D+ VV + +
Sbjct: 79 YRGAMGIMLVYDISNTKSFENISKWLRNIDEHANEDVERMLLGNKCDMEDKRVVPKAKGE 138
Query: 154 LLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSELRQQE 193
++R G R TS K +IN+ F L L + +E
Sbjct: 139 QIAREHGIRFFETSAKANINIEKAFLTLAEDILKKTPVKE 178
>gi|301604366|ref|XP_002931827.1| PREDICTED: ras-related protein Rab-39B-like isoform 1 [Xenopus
(Silurana) tropicalis]
Length = 211
Score = 86.3 bits (212), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 47/125 (37%), Positives = 70/125 (56%), Gaps = 2/125 (1%)
Query: 71 GEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW--KMKVENECG 128
G+ ++L +WDTAGQE F +IT+AYYR + ++ F +R SF+ H W + K +
Sbjct: 53 GKRIKLQIWDTAGQERFRSITRAYYRNSVGGLLLFDITNRRSFQNVHEWLEEAKAHVQPY 112
Query: 129 EIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSE 188
+I VLV +K DL Q V EA+ L+ + G R + TS ++ INV F LT
Sbjct: 113 QIVFVLVGHKCDLDTQRQVTRHEAEKLASSFGMRYIETSARDAINVEKAFTELTRDIYEL 172
Query: 189 LRQQE 193
+R+ E
Sbjct: 173 VRKGE 177
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 33/49 (67%)
Query: 8 GEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
G+ ++L +WDTAGQE F +IT+AYYR + ++ F +R SF+ H W
Sbjct: 53 GKRIKLQIWDTAGQERFRSITRAYYRNSVGGLLLFDITNRRSFQNVHEW 101
>gi|346467487|gb|AEO33588.1| hypothetical protein [Amblyomma maculatum]
Length = 228
Score = 86.3 bits (212), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 71/146 (48%), Gaps = 1/146 (0%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
DS+ ++ + V K E +G+ ++L +WDTAGQE F IT +YYRGA ++ +
Sbjct: 68 DSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDV 127
Query: 108 IDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
D+DSF W +++ E + +LV NK DL VV+ E + +G M T
Sbjct: 128 TDQDSFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETGKAFADEIGIPFMET 187
Query: 167 SVKEDINVNSIFRYLTTKCLSELRQQ 192
S K NV F + + + Q
Sbjct: 188 SAKNATNVXHAFMAMAADIKNRMASQ 213
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 32/50 (64%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
+G+ ++L +WDTAGQE F IT +YYRGA ++ + D+DSF W
Sbjct: 90 DGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQDSFNNVKQW 139
>gi|218191283|gb|EEC73710.1| hypothetical protein OsI_08312 [Oryza sativa Indica Group]
Length = 206
Score = 86.3 bits (212), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 74/159 (46%), Gaps = 5/159 (3%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
DS+ ++ + V K E +G+ ++L +WDTAGQE F IT +YYRGA +I +
Sbjct: 34 DSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDV 93
Query: 108 IDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
D++SF W +++ + + +LV NK DL VV+ E A + +G M T
Sbjct: 94 TDQESFNNVKQWLNEIDRYASDNVNKLLVGNKSDLTANKVVSSETAKAFADEMGIPFMET 153
Query: 167 SVKEDINVNSIFRYLTTKCLSELRQQEEEYSINGNGLPP 205
S K NV F + + Q N PP
Sbjct: 154 SAKNATNVEQAFMAMAASIKDRMASQPAA----ANARPP 188
Score = 59.3 bits (142), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 32/50 (64%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
+G+ ++L +WDTAGQE F IT +YYRGA +I + D++SF W
Sbjct: 56 DGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQW 105
>gi|164658714|ref|XP_001730482.1| hypothetical protein MGL_2278 [Malassezia globosa CBS 7966]
gi|159104378|gb|EDP43268.1| hypothetical protein MGL_2278 [Malassezia globosa CBS 7966]
Length = 212
Score = 86.3 bits (212), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 67/132 (50%), Gaps = 1/132 (0%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
D++ ++ + V K E EG+ V+L +WDTAGQE F IT +YYRGA ++ +
Sbjct: 34 DTYTESYISTIGVDFKIRTIELEGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDV 93
Query: 108 IDRDSFEAAHSWKMKVEN-ECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
D +F W ++E C + +LV NK DL + V E A L+ LG + T
Sbjct: 94 TDESTFANVKQWLQEIERYACEGVNKLLVGNKADLTNSKAVDFESAKQLADELGIAFLDT 153
Query: 167 SVKEDINVNSIF 178
S K+ NV F
Sbjct: 154 SAKDATNVEQAF 165
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 30/50 (60%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
EG+ V+L +WDTAGQE F IT +YYRGA ++ + D +F W
Sbjct: 56 EGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDESTFANVKQW 105
>gi|388854821|emb|CCF51502.1| probable Ras-related protein Rab-18 [Ustilago hordei]
Length = 232
Score = 86.3 bits (212), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 73/144 (50%), Gaps = 4/144 (2%)
Query: 48 DSFEAAHSWKMKVSIKRTIK--ECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITF 105
D F + + + IK E G+ +L +WDTAGQE F +T +YYRGAQ +I +
Sbjct: 31 DEFLSPEETTATIGVDYRIKGIEVGGKRFKLSIWDTAGQERFRTLTSSYYRGAQGVIIAY 90
Query: 106 STIDRDSFEAAHSWKMKVE--NECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRL 163
RD+F+A +W ++E ++ ++V NK+D VV EE + +GC
Sbjct: 91 DVTQRDTFDALPTWFNELETFTTSEDVVKIIVGNKVDKEFSRVVTTEEGQGFADKMGCLF 150
Query: 164 MRTSVKEDINVNSIFRYLTTKCLS 187
+ S K+ + VN F L + +S
Sbjct: 151 VECSAKKGVGVNGAFDELVNRIIS 174
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 33/49 (67%)
Query: 8 GEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
G+ +L +WDTAGQE F +T +YYRGAQ +I + RD+F+A +W
Sbjct: 56 GKRFKLSIWDTAGQERFRTLTSSYYRGAQGVIIAYDVTQRDTFDALPTW 104
>gi|156551213|ref|XP_001600682.1| PREDICTED: ras-related protein Rab-8A-like isoform 1 [Nasonia
vitripennis]
Length = 209
Score = 86.3 bits (212), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 80/161 (49%), Gaps = 3/161 (1%)
Query: 35 AQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAY 94
+ CV+ D+F + + K E +G++++L +WDTAGQE F IT AY
Sbjct: 20 GKTCVLF--RFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDTAGQERFRTITTAY 77
Query: 95 YRGAQACVITFSTIDRDSFEAAHSWKMKV-ENECGEIPTVLVQNKIDLLDQSVVAPEEAD 153
YRGA ++ + + SFE +W + EN ++ +L+ NK +L + V+ E +
Sbjct: 78 YRGAMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMLLGNKCELTSKRQVSKERGE 137
Query: 154 LLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSELRQQEE 194
L+ G + M TS K INV F L +++ ++ E
Sbjct: 138 ALAIEYGIKFMETSAKSSINVEEAFFTLARDIKAKMEKRLE 178
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 41/72 (56%), Gaps = 6/72 (8%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVSIKRTI 66
+G++++L +WDTAGQE F IT AYYRGA ++ + + SFE +W R I
Sbjct: 53 DGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDVTNEKSFENIKNW------IRNI 106
Query: 67 KECEGEEVRLML 78
+E +V ML
Sbjct: 107 EENASADVEKML 118
>gi|195044333|ref|XP_001991801.1| GH12858 [Drosophila grimshawi]
gi|193901559|gb|EDW00426.1| GH12858 [Drosophila grimshawi]
Length = 229
Score = 86.3 bits (212), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 81/153 (52%), Gaps = 5/153 (3%)
Query: 35 AQACVITFSTIDR---DSFEAAHSWKMKVS-IKRTIKECEGEEVRLMLWDTAGQEEFDAI 90
+ CV S + R D F H ++ S + + + + L +WDTAGQE F A+
Sbjct: 20 GEGCVGKTSLVLRYIEDKFNTHHLSTLQASFVTKKVTLPDERRALLNIWDTAGQERFHAL 79
Query: 91 TKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENECG-EIPTVLVQNKIDLLDQSVVAP 149
YYRG+ ++ + D+DSF+ SW +++ G EI V+V NK DL +Q ++
Sbjct: 80 GPIYYRGSDGALLVYDITDQDSFQKVKSWVRELKQMRGSEIALVIVGNKTDLEEQRAISY 139
Query: 150 EEADLLSRALGCRLMRTSVKEDINVNSIFRYLT 182
E A L ++ +G + + TS KE+ V+ +F LT
Sbjct: 140 ETALLYAQTVGAQYVETSAKENEGVHDLFELLT 172
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 38/66 (57%), Gaps = 6/66 (9%)
Query: 13 LMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGE 72
L +WDTAGQE F A+ YYRG+ ++ + D+DSF+ SW R +K+ G
Sbjct: 65 LNIWDTAGQERFHALGPIYYRGSDGALLVYDITDQDSFQKVKSW------VRELKQMRGS 118
Query: 73 EVRLML 78
E+ L++
Sbjct: 119 EIALVI 124
>gi|343470855|emb|CCD16567.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 208
Score = 86.3 bits (212), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 70/132 (53%), Gaps = 1/132 (0%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
DS+ ++ + V K +G+ ++L +WDTAGQE F IT +YYRGA +I + T
Sbjct: 31 DSYTESYISTIGVDFKIRTLNLDGKVIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDT 90
Query: 108 IDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
D +SF SW +++ E + +LV NK DL+ + V + A + +LG + T
Sbjct: 91 TDMESFNNVKSWLSEIDKFASESVNKLLVGNKCDLVTKKAVDTQMAQEFADSLGIPFLET 150
Query: 167 SVKEDINVNSIF 178
S KE NV F
Sbjct: 151 SAKEAANVEKAF 162
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 33/50 (66%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
+G+ ++L +WDTAGQE F IT +YYRGA +I + T D +SF SW
Sbjct: 53 DGKVIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDTTDMESFNNVKSW 102
>gi|326427375|gb|EGD72945.1| GTP-binding protein yptV1 [Salpingoeca sp. ATCC 50818]
Length = 220
Score = 86.3 bits (212), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 84/174 (48%), Gaps = 5/174 (2%)
Query: 35 AQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAY 94
++C++ T R F+ H + V + +G +++L +WDTAGQE F +IT++Y
Sbjct: 19 GKSCLLLQFTDHR--FQTVHDLTIGVEFGARMVTIDGHQIKLQIWDTAGQESFRSITRSY 76
Query: 95 YRGAQACVITFSTIDRDSFEAAHSWKMKVENECG-EIPTVLVQNKIDLLDQSVVAPEEAD 153
YRGA ++ + R++F+ +W + +LV NK DL D+ V EE +
Sbjct: 77 YRGAAGALLVYDITRRETFQHLGTWLEDARAHSNPNMVIILVGNKADLEDKRQVPREEGE 136
Query: 154 LLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSELRQQ--EEEYSINGNGLPP 205
+R G + TS K +NV F K +L+Q + +NG + P
Sbjct: 137 RFARERGLLFIETSAKTAMNVEDAFTTTANKIYEKLQQGVFDARNELNGIKIGP 190
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 35/50 (70%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
+G +++L +WDTAGQE F +IT++YYRGA ++ + R++F+ +W
Sbjct: 52 DGHQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFQHLGTW 101
>gi|116196288|ref|XP_001223956.1| hypothetical protein CHGG_04742 [Chaetomium globosum CBS 148.51]
gi|88180655|gb|EAQ88123.1| hypothetical protein CHGG_04742 [Chaetomium globosum CBS 148.51]
Length = 206
Score = 86.3 bits (212), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 73/149 (48%), Gaps = 4/149 (2%)
Query: 34 GAQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKA 93
G C++ FS DSF + + + K E +G+ V+L +WDTAGQE F IT A
Sbjct: 23 GKSCCLLRFS---EDSFTPSFITTIGIDFKIRTIELDGKRVKLQIWDTAGQERFRTITTA 79
Query: 94 YYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEA 152
YYRGA ++ + D SF +W VE E + +L+ NK D ++ VV+ E
Sbjct: 80 YYRGAMGILLVYDVTDERSFNNIRTWFANVEQHATEGVNKILIGNKCDWEEKRVVSTERG 139
Query: 153 DLLSRALGCRLMRTSVKEDINVNSIFRYL 181
L+ L + S K + N++ F L
Sbjct: 140 QQLADELNIPFLEVSAKTNNNIDKAFYSL 168
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 67/142 (47%), Gaps = 17/142 (11%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV------ 60
+G+ V+L +WDTAGQE F IT AYYRGA ++ + D SF +W V
Sbjct: 56 DGKRVKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRTWFANVEQHATE 115
Query: 61 SIKRTI--KECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHS 118
+ + + +C+ EE R++ + GQ+ D + + + T + ID+ + A
Sbjct: 116 GVNKILIGNKCDWEEKRVVSTE-RGQQLADELNIPFL---EVSAKTNNNIDKAFYSLAAD 171
Query: 119 WKMKV-----ENECGEIPTVLV 135
K ++ ++ G P V V
Sbjct: 172 IKKRIIDTSKPDQAGSGPAVNV 193
>gi|12843097|dbj|BAB25858.1| unnamed protein product [Mus musculus]
Length = 200
Score = 86.3 bits (212), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 80/160 (50%), Gaps = 3/160 (1%)
Query: 35 AQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAY 94
+ CV+ F D D+F + + K E +G++++L +WDTAGQE F IT +Y
Sbjct: 21 GKTCVL-FRFSD-DAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQERFHTITTSY 78
Query: 95 YRGAQACVITFSTIDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEAD 153
YRGA ++ + + SFE W ++ E + +L+ NK D+ D+ VV + +
Sbjct: 79 YRGAMGIMLVYDITNGKSFENISKWLRHIDEHANEDVERMLLGNKCDMDDKRVVPKGKGE 138
Query: 154 LLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSELRQQE 193
++R G R TS K +IN+ F L L + +E
Sbjct: 139 QIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVKE 178
>gi|116785433|gb|ABK23720.1| unknown [Picea sitchensis]
Length = 207
Score = 86.3 bits (212), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 50/152 (32%), Positives = 75/152 (49%), Gaps = 6/152 (3%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
D F+ + + + E VRL LWDTAGQE F ++ +Y R + VI F
Sbjct: 32 DKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVFDV 91
Query: 108 IDRDSFEAAHSWKMKVENECG-EIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
+R SF W +V E G ++ VLV NK DL+D+ V+ EE D +R G + T
Sbjct: 92 ANRQSFLNTARWIEEVRTERGSDVIIVLVGNKTDLVDKRQVSIEEGDAKAREFGVMFIET 151
Query: 167 SVKEDINVNSIFRYLTT-----KCLSELRQQE 193
S K N+ ++FR + + LS +Q++
Sbjct: 152 SAKAGFNIKALFRKIAAALPGMETLSSTKQED 183
Score = 49.7 bits (117), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 31/58 (53%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVSIKR 64
E VRL LWDTAGQE F ++ +Y R + VI F +R SF W +V +R
Sbjct: 54 EDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVFDVANRQSFLNTARWIEEVRTER 111
>gi|410924594|ref|XP_003975766.1| PREDICTED: ras-related protein Rab-3A-like [Takifugu rubripes]
Length = 219
Score = 86.3 bits (212), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 49/136 (36%), Positives = 71/136 (52%), Gaps = 3/136 (2%)
Query: 48 DSFEAAHSWKMKVSIK-RTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFS 106
DSF + + K +TI + + ++L +WDTAGQE + IT AYYRGA ++ +
Sbjct: 44 DSFTPTFVSTVGIDFKVKTIYRSD-KRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYD 102
Query: 107 TIDRDSFEAAHSWKMKVENECGEIPTV-LVQNKIDLLDQSVVAPEEADLLSRALGCRLMR 165
+ DSF A W +++ + V LV NK D+ D+ VVA + LS LG
Sbjct: 103 ITNEDSFNAVQDWSTQIKTYSWDNAQVLLVGNKCDMEDERVVASQRGQQLSDQLGFEFFE 162
Query: 166 TSVKEDINVNSIFRYL 181
TS K++INV F L
Sbjct: 163 TSAKDNINVKQTFERL 178
>gi|355714923|gb|AES05162.1| RAB3D, member RAS oncoprotein family [Mustela putorius furo]
Length = 201
Score = 86.3 bits (212), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 77/160 (48%), Gaps = 2/160 (1%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
DSF A + + K + ++L +WDTAGQE + IT AYYRGA ++ +
Sbjct: 28 DSFTPAFVSTVGIDFKVKTVYRHDKRIKLQIWDTAGQERYRTITTAYYRGAMGFLLMYDV 87
Query: 108 IDRDSFEAAHSWKMKVENEC-GEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
+++SF A W +++ +LV NK DL D+ VV E+ L+ LG
Sbjct: 88 ANQESFAAVQDWATQIKTYSWDNAQVILVGNKCDLEDERVVPTEDGRRLADDLGFEFFEA 147
Query: 167 SVKEDINVNSIFRYLTTKCLSELRQQEEEYSING-NGLPP 205
S KE+INV +F L ++ + + S G NG P
Sbjct: 148 SAKENINVKQVFERLVDVICEKMNESLDPSSSPGSNGKGP 187
>gi|348525384|ref|XP_003450202.1| PREDICTED: ras-related protein Rab-30-like [Oreochromis niloticus]
Length = 203
Score = 86.3 bits (212), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 78/149 (52%), Gaps = 1/149 (0%)
Query: 50 FEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTID 109
F + V E +GE+V+L +WDTAGQE F +IT++YYR A A ++T+
Sbjct: 34 FPPGQGATIGVDFMIKTVEIKGEKVKLQIWDTAGQERFRSITQSYYRSANALILTYDITC 93
Query: 110 RDSFEAAHSWKMKVENEC-GEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSV 168
DSF W ++E ++ T+LV NKIDL ++ V + A+ + A + TS
Sbjct: 94 EDSFRCLPEWLREIEQYANNQVVTILVGNKIDLAEKREVLRQRAEDFAEAQSMLYLETSA 153
Query: 169 KEDINVNSIFRYLTTKCLSELRQQEEEYS 197
KE NV +F L + + E +Q + + S
Sbjct: 154 KESDNVEKLFLDLACELIREAKQNKLDNS 182
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 34/50 (68%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
+GE+V+L +WDTAGQE F +IT++YYR A A ++T+ DSF W
Sbjct: 54 KGEKVKLQIWDTAGQERFRSITQSYYRSANALILTYDITCEDSFRCLPEW 103
>gi|426379395|ref|XP_004056383.1| PREDICTED: ras-related protein Rab-8B [Gorilla gorilla gorilla]
Length = 209
Score = 86.3 bits (212), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 78/142 (54%), Gaps = 2/142 (1%)
Query: 64 RTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 123
RTI E +G++++L +WDTAGQE F IT AYYRGA ++ + + SF+ +W +
Sbjct: 50 RTI-ELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNI 108
Query: 124 -ENECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLT 182
E+ ++ +++ NK D+ D+ V+ E + L+ G + + TS K NV F L
Sbjct: 109 EEHASSDVERMILGNKCDMNDKRQVSKERGEKLAIDYGIKFLETSAKSSANVEEAFFTLA 168
Query: 183 TKCLSELRQQEEEYSINGNGLP 204
+++L ++ + + G G P
Sbjct: 169 RDIMTKLNRKMNDSNSAGAGGP 190
>gi|184186107|ref|NP_001116975.1| GTPase homolog [Strongylocentrotus purpuratus]
Length = 207
Score = 86.3 bits (212), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 82/147 (55%), Gaps = 3/147 (2%)
Query: 48 DSFEAAHSWKMKVSIK-RTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFS 106
D+F + + + K RTI E +G++++L +WDTAGQE F IT AYYRGA ++ +
Sbjct: 31 DAFNSTFISTIGIDFKIRTI-ELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYD 89
Query: 107 TIDRDSFEAAHSWKMKV-ENECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMR 165
++ SF+ +W + E+ ++ +++ NK D+ D+ V+ E+ + L+ G + M
Sbjct: 90 ITNQKSFDNIRNWIRNIEEHASADVEKMILGNKCDMDDRRAVSKEKGEQLAIEYGIKFME 149
Query: 166 TSVKEDINVNSIFRYLTTKCLSELRQQ 192
TS K INV F L S++ ++
Sbjct: 150 TSAKASINVEEAFVTLARDIKSKMDRK 176
>gi|410049418|ref|XP_510465.4| PREDICTED: ras-related protein Rab-8B [Pan troglodytes]
Length = 226
Score = 86.3 bits (212), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 78/142 (54%), Gaps = 2/142 (1%)
Query: 64 RTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 123
RTI E +G++++L +WDTAGQE F IT AYYRGA ++ + + SF+ +W +
Sbjct: 67 RTI-ELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNI 125
Query: 124 -ENECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLT 182
E+ ++ +++ NK D+ D+ V+ E + L+ G + + TS K NV F L
Sbjct: 126 EEHASSDVERMILGNKCDMNDKRQVSKERGEKLAIDYGIKFLETSAKSSANVEEAFFTLA 185
Query: 183 TKCLSELRQQEEEYSINGNGLP 204
+++L ++ + + G G P
Sbjct: 186 RDIMTKLNRKMNDSNSAGAGGP 207
>gi|4096662|gb|AAD10389.1| Rab1-like small GTP-binding protein [Petunia x hybrida]
Length = 202
Score = 86.3 bits (212), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 70/132 (53%), Gaps = 1/132 (0%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
DS+ ++ + V K E +G+ ++L +WDTAGQE F IT +YYRGA +I +
Sbjct: 31 DSYVDSYISTIGVDFKIRTVELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDV 90
Query: 108 IDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
+ +SF W +++ E + +LV NK DL++ VV + L+ LG + T
Sbjct: 91 TEMESFNNVKQWLSEIDRYANESVCKLLVGNKCDLVENKVVDTQTGKALADELGIPFLET 150
Query: 167 SVKEDINVNSIF 178
S K+ INV F
Sbjct: 151 SAKDSINVEQAF 162
>gi|25150215|ref|NP_491199.2| Protein RAB-8 [Caenorhabditis elegans]
gi|40788402|dbj|BAD07034.1| Rab8 [Caenorhabditis elegans]
gi|351060636|emb|CCD68351.1| Protein RAB-8 [Caenorhabditis elegans]
Length = 211
Score = 86.3 bits (212), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 85/160 (53%), Gaps = 3/160 (1%)
Query: 35 AQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAY 94
+ CV+ F D DSF + + + K E +G++++L +WDTAGQE F IT AY
Sbjct: 20 GKTCVL-FRFSD-DSFNNSFISTIGIDFKIRTIELDGKKIKLQIWDTAGQERFRTITTAY 77
Query: 95 YRGAQACVITFSTIDRDSFEAAHSWKMKV-ENECGEIPTVLVQNKIDLLDQSVVAPEEAD 153
YRGA ++ + + SFE +W + E+ ++ +++ NK D+ ++ V+ + +
Sbjct: 78 YRGAMGIILVYDITNERSFENIKNWIRNIEEHAASDVERMIIGNKCDIEERREVSRDRGE 137
Query: 154 LLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSELRQQE 193
L+ G + + TS K ++N++ F L S++ Q E
Sbjct: 138 QLAIEYGTKFLETSAKANLNIDEAFFTLARDIKSKMEQNE 177
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 62/126 (49%), Gaps = 12/126 (9%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV------ 60
+G++++L +WDTAGQE F IT AYYRGA ++ + + SFE +W +
Sbjct: 53 DGKKIKLQIWDTAGQERFRTITTAYYRGAMGIILVYDITNERSFENIKNWIRNIEEHAAS 112
Query: 61 SIKRTI--KECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHS 118
++R I +C+ EE R + D Q + TK A+A + ID F A
Sbjct: 113 DVERMIIGNKCDIEERREVSRDRGEQLAIEYGTKFLETSAKANL----NIDEAFFTLARD 168
Query: 119 WKMKVE 124
K K+E
Sbjct: 169 IKSKME 174
>gi|343475422|emb|CCD13178.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 208
Score = 86.3 bits (212), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 70/132 (53%), Gaps = 1/132 (0%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
DS+ ++ + V K +G+ ++L +WDTAGQE F IT +YYRGA +I + T
Sbjct: 31 DSYTESYISTIGVDFKIRTLNLDGKVIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDT 90
Query: 108 IDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
D +SF SW +++ E + +LV NK DL+ + V + A + +LG + T
Sbjct: 91 TDMESFNNVKSWLSEIDKFASESVNKLLVGNKCDLVTKKAVDTQMAQEFADSLGIPFLET 150
Query: 167 SVKEDINVNSIF 178
S KE NV F
Sbjct: 151 SAKEAANVEKAF 162
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 33/50 (66%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
+G+ ++L +WDTAGQE F IT +YYRGA +I + T D +SF SW
Sbjct: 53 DGKVIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDTTDMESFNNVKSW 102
>gi|449461253|ref|XP_004148356.1| PREDICTED: ras-related protein RABD2c-like [Cucumis sativus]
gi|449505222|ref|XP_004162409.1| PREDICTED: ras-related protein RABD2c-like [Cucumis sativus]
Length = 202
Score = 86.3 bits (212), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 79/159 (49%), Gaps = 6/159 (3%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
DS+ ++ + V K E +G+ ++L +WDTAGQE F IT +YYRGA ++ +
Sbjct: 31 DSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDV 90
Query: 108 IDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
D++SF W +++ E + +LV NK DL VV+ E A + +G M T
Sbjct: 91 TDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMET 150
Query: 167 SVKEDINVNSIFRYLTTKCLSELRQQEEEYSINGNGLPP 205
S K NV F + +E++ + +N N PP
Sbjct: 151 SAKSATNVEEAFMAMA----AEIKNRMATQPMN-NARPP 184
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 32/50 (64%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
+G+ ++L +WDTAGQE F IT +YYRGA ++ + D++SF W
Sbjct: 53 DGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQW 102
>gi|335295264|ref|XP_003357447.1| PREDICTED: ras-related protein Rab-7L1-like isoform 1 [Sus scrofa]
gi|335295266|ref|XP_003357448.1| PREDICTED: ras-related protein Rab-7L1-like isoform 2 [Sus scrofa]
gi|335295268|ref|XP_003357449.1| PREDICTED: ras-related protein Rab-7L1-like isoform 3 [Sus scrofa]
Length = 203
Score = 86.3 bits (212), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 87/168 (51%), Gaps = 9/168 (5%)
Query: 47 RDSFEAAHSWKMKVSIK-RTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITF 105
+DSF + + V + ++ + E VRL LWD AGQE F ++T+ YYR A ACVI F
Sbjct: 29 QDSFSKHYKSTVGVDFALKVLQWSDSEVVRLQLWDIAGQERFTSMTRLYYRDASACVIMF 88
Query: 106 STIDRDSFEAAHSWKMKVENEC-----GEIPTVLVQNKIDLLDQSVVAPEEADLLSRALG 160
+ +F + WK ++++ G +P +L+ NK D L V+ ++ D S+ G
Sbjct: 89 DVTNATTFSNSQRWKQDLDSKLTLPNGGPVPCLLLANKCD-LSPWAVSRDQVDRFSKENG 147
Query: 161 -CRLMRTSVKEDINVNSIFRYLTTKCLSELRQQEEEYSINGNGLPPYT 207
TSVKE+ N+N R L K +S ++E S GN + +T
Sbjct: 148 FTGWTETSVKENKNINEAMRVLIEKMMSN-SKEEMSLSTQGNYINLHT 194
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 36/60 (60%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVSIKRTI 66
+ E VRL LWD AGQE F ++T+ YYR A ACVI F + +F + WK + K T+
Sbjct: 53 DSEVVRLQLWDIAGQERFTSMTRLYYRDASACVIMFDVTNATTFSNSQRWKQDLDSKLTL 112
>gi|326916650|ref|XP_003204619.1| PREDICTED: ras-related protein Rab-10-like [Meleagris gallopavo]
Length = 207
Score = 86.3 bits (212), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 74/147 (50%), Gaps = 1/147 (0%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
D+F + + K E +G++++L +WDTAGQE F IT +YYRGA ++ +
Sbjct: 39 DAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDI 98
Query: 108 IDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
+ SFE W ++ E + +L+ NK D+ D+ VV + + ++R G R T
Sbjct: 99 TNAKSFENISKWLRNIDEHANEDVERMLLGNKCDMEDKRVVPKAKGEQIAREHGIRFFET 158
Query: 167 SVKEDINVNSIFRYLTTKCLSELRQQE 193
S K +IN+ F L L + +E
Sbjct: 159 SAKANINIEKAFLTLAEDILRKTPVKE 185
Score = 59.3 bits (142), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 48/88 (54%), Gaps = 7/88 (7%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVSIKRTI 66
+G++++L +WDTAGQE F IT +YYRGA ++ + + SFE W R I
Sbjct: 61 QGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNAKSFENISKW------LRNI 114
Query: 67 KECEGEEV-RLMLWDTAGQEEFDAITKA 93
E E+V R++L + E+ + KA
Sbjct: 115 DEHANEDVERMLLGNKCDMEDKRVVPKA 142
>gi|12856302|dbj|BAB30625.1| unnamed protein product [Mus musculus]
Length = 203
Score = 86.3 bits (212), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 51/143 (35%), Positives = 75/143 (52%), Gaps = 1/143 (0%)
Query: 50 FEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTID 109
F + V E GE+V+L +WDTA QE F +IT++YYR A A ++T+
Sbjct: 34 FPPGQGATIGVDFMIKTVEINGEKVKLQIWDTAVQERFRSITQSYYRSANALILTYDITC 93
Query: 110 RDSFEAAHSWKMKVEN-ECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSV 168
+SF W ++E ++ TVLV NKIDL ++ V+ + A+ S A + TS
Sbjct: 94 EESFRCLPEWLREIEQYASNKVITVLVGNKIDLAERREVSQQRAEEFSEAQDMYYLETSA 153
Query: 169 KEDINVNSIFRYLTTKCLSELRQ 191
KE NV +F L + +SE RQ
Sbjct: 154 KESDNVEKLFLDLACRLISEARQ 176
Score = 52.8 bits (125), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 32/49 (65%)
Query: 8 GEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
GE+V+L +WDTA QE F +IT++YYR A A ++T+ +SF W
Sbjct: 55 GEKVKLQIWDTAVQERFRSITQSYYRSANALILTYDITCEESFRCLPEW 103
>gi|452819428|gb|EME26487.1| Rab family, other [Galdieria sulphuraria]
Length = 203
Score = 86.3 bits (212), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 70/132 (53%), Gaps = 1/132 (0%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
D++ ++ + V K E +G+ V+L +WDTAGQE F IT +YYRGA +I +
Sbjct: 31 DTYNESYISTIGVDFKIRTIELDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDV 90
Query: 108 IDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
D++SF +W +++ E + +LV NK DL + VV A + +LG + + T
Sbjct: 91 TDQESFNNVKTWLHEIDRYANESVNKLLVGNKNDLTTKKVVDTATAKEFADSLGIKFLET 150
Query: 167 SVKEDINVNSIF 178
S K NV F
Sbjct: 151 SAKTSENVEQAF 162
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 48/87 (55%), Gaps = 6/87 (6%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV------ 60
+G+ V+L +WDTAGQE F IT +YYRGA +I + D++SF +W ++
Sbjct: 53 DGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKTWLHEIDRYANE 112
Query: 61 SIKRTIKECEGEEVRLMLWDTAGQEEF 87
S+ + + + + + DTA +EF
Sbjct: 113 SVNKLLVGNKNDLTTKKVVDTATAKEF 139
>gi|301753801|ref|XP_002912748.1| PREDICTED: ras-related protein Rab-8A-like [Ailuropoda melanoleuca]
gi|281343489|gb|EFB19073.1| hypothetical protein PANDA_000488 [Ailuropoda melanoleuca]
Length = 207
Score = 86.3 bits (212), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 84/156 (53%), Gaps = 3/156 (1%)
Query: 48 DSFEAAHSWKMKVSIK-RTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFS 106
D+F + + + K RTI E +G+ ++L +WDTAGQE F IT AYYRGA ++ +
Sbjct: 31 DAFNSTFISTIGIDFKIRTI-ELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYD 89
Query: 107 TIDRDSFEAAHSWKMKV-ENECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMR 165
+ SF+ +W + E+ ++ +++ NK D+ D+ V+ E L+ G + M
Sbjct: 90 ITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCDVNDKRQVSKERGKKLALDYGIKFME 149
Query: 166 TSVKEDINVNSIFRYLTTKCLSELRQQEEEYSINGN 201
TS K +INV + F L +++ ++ E S G+
Sbjct: 150 TSAKANINVENAFFTLARDIKAKMDKKLEGNSPQGS 185
>gi|255549670|ref|XP_002515886.1| protein with unknown function [Ricinus communis]
gi|223544791|gb|EEF46306.1| protein with unknown function [Ricinus communis]
Length = 219
Score = 86.3 bits (212), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 76/158 (48%), Gaps = 1/158 (0%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
DS+ ++ + V K E +G+ ++L +WDTAGQE F IT +YYRGA +I F
Sbjct: 47 DSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVFDV 106
Query: 108 IDRDSFEAAHSWKMKVEN-ECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
D +SF W +++ I +LV NK D+ ++ VV+ E A + +G + T
Sbjct: 107 TDEESFRNVKGWLTEIDKFATDNINKLLVGNKCDVTNKRVVSNETAKAFADEIGIPFLET 166
Query: 167 SVKEDINVNSIFRYLTTKCLSELRQQEEEYSINGNGLP 204
S K NV F + + + Q ++ +P
Sbjct: 167 SAKNATNVEDAFMTMAAEIKKRMASQPAANAVRPTTVP 204
Score = 60.1 bits (144), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 31/50 (62%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
+G+ ++L +WDTAGQE F IT +YYRGA +I F D +SF W
Sbjct: 69 DGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVFDVTDEESFRNVKGW 118
>gi|242066528|ref|XP_002454553.1| hypothetical protein SORBIDRAFT_04g033160 [Sorghum bicolor]
gi|194691170|gb|ACF79669.1| unknown [Zea mays]
gi|219887101|gb|ACL53925.1| unknown [Zea mays]
gi|241934384|gb|EES07529.1| hypothetical protein SORBIDRAFT_04g033160 [Sorghum bicolor]
gi|413938047|gb|AFW72598.1| GTP-binding protein YPTM2 isoform 1 [Zea mays]
gi|413938048|gb|AFW72599.1| GTP-binding protein YPTM2 isoform 2 [Zea mays]
Length = 203
Score = 86.3 bits (212), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 71/146 (48%), Gaps = 1/146 (0%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
DS+ ++ + V K E +G+ ++L +WDTAGQE F IT +YYRGA +I +
Sbjct: 31 DSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDV 90
Query: 108 IDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
D++SF W +++ + + +LV NK DL VVA E A + +G M T
Sbjct: 91 TDQESFNNVKQWLNEIDRYASDNVNKLLVGNKSDLTANKVVATETAKAFADEMGIPFMET 150
Query: 167 SVKEDINVNSIFRYLTTKCLSELRQQ 192
S K NV F + + Q
Sbjct: 151 SAKNATNVEQAFMAMAASIKDRMASQ 176
Score = 59.3 bits (142), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 32/50 (64%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
+G+ ++L +WDTAGQE F IT +YYRGA +I + D++SF W
Sbjct: 53 DGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQW 102
>gi|145538704|ref|XP_001455052.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124422840|emb|CAK87655.1| unnamed protein product [Paramecium tetraurelia]
Length = 231
Score = 86.3 bits (212), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 85/177 (48%), Gaps = 5/177 (2%)
Query: 35 AQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAY 94
++C++ T R F H + V + + ++L +WDTAGQE F +IT++Y
Sbjct: 19 GKSCLLLQFTDSR--FRNEHDATIGVEFGSRNTKINDKTIKLQVWDTAGQEAFKSITRSY 76
Query: 95 YRGAQACVITFSTIDRDSFEAAHSWKMKVEN-ECGEIPTVLVQNKIDLLDQSVVAPEEAD 153
YRG+ ++ F R SFE W +++ C +I LV NKIDL + V EEA
Sbjct: 77 YRGSIGGILVFDVTSRQSFEGVAKWYQEIQGYACDKIEMALVANKIDLDAKREVQTEEAQ 136
Query: 154 LLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSELRQQEEEYS--INGNGLPPYTI 208
++ G TS K NV+++F + L + E + S I G + P T+
Sbjct: 137 AFAKKHGFAYFETSAKTGENVDTVFESMAQTILKRIDSGEIDPSQEIYGIKVGPGTV 193
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 32/50 (64%)
Query: 11 VRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 60
++L +WDTAGQE F +IT++YYRG+ ++ F R SFE W ++
Sbjct: 56 IKLQVWDTAGQEAFKSITRSYYRGSIGGILVFDVTSRQSFEGVAKWYQEI 105
>gi|301604368|ref|XP_002931828.1| PREDICTED: ras-related protein Rab-39B-like isoform 2 [Xenopus
(Silurana) tropicalis]
Length = 212
Score = 86.3 bits (212), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 47/125 (37%), Positives = 70/125 (56%), Gaps = 2/125 (1%)
Query: 71 GEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW--KMKVENECG 128
G+ ++L +WDTAGQE F +IT+AYYR + ++ F +R SF+ H W + K +
Sbjct: 54 GKRIKLQIWDTAGQERFRSITRAYYRNSVGGLLLFDITNRRSFQNVHEWLEEAKAHVQPY 113
Query: 129 EIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSE 188
+I VLV +K DL Q V EA+ L+ + G R + TS ++ INV F LT
Sbjct: 114 QIVFVLVGHKCDLDTQRQVTRHEAEKLASSFGMRYIETSARDAINVEKAFTELTRDIYEL 173
Query: 189 LRQQE 193
+R+ E
Sbjct: 174 VRKGE 178
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 33/49 (67%)
Query: 8 GEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
G+ ++L +WDTAGQE F +IT+AYYR + ++ F +R SF+ H W
Sbjct: 54 GKRIKLQIWDTAGQERFRSITRAYYRNSVGGLLLFDITNRRSFQNVHEW 102
>gi|302756377|ref|XP_002961612.1| rab family GTPase [Selaginella moellendorffii]
gi|302775546|ref|XP_002971190.1| rab family GTPase [Selaginella moellendorffii]
gi|300161172|gb|EFJ27788.1| rab family GTPase [Selaginella moellendorffii]
gi|300170271|gb|EFJ36872.1| rab family GTPase [Selaginella moellendorffii]
Length = 215
Score = 86.3 bits (212), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 85/178 (47%), Gaps = 10/178 (5%)
Query: 34 GAQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKA 93
G ++ FS DSF + + + K + +G+ ++L +WDTAGQE F IT A
Sbjct: 27 GKSCLLLRFSD---DSFTTSFITTIGIDFKIRTVDLDGKRIKLQIWDTAGQERFRTITTA 83
Query: 94 YYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQS--VVAPE 150
YYRGA ++ + D SF +W +E + + +LV NK D +D+S V+ E
Sbjct: 84 YYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD-MDESKRAVSTE 142
Query: 151 EADLLSRALGCRLMRTSVKEDINVNSIFRYLT---TKCLSELRQQEEEYSINGNGLPP 205
L+ G + TS K ++NV +F + + L+E + E IN L P
Sbjct: 143 RGQALANEFGIKFFETSAKTNLNVEKVFFTIAGDIKRRLAETDSRPEPPRINNIVLDP 200
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 31/50 (62%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
+G+ ++L +WDTAGQE F IT AYYRGA ++ + D SF +W
Sbjct: 60 DGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNW 109
>gi|134118235|ref|XP_772218.1| hypothetical protein CNBM0510 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50254827|gb|EAL17571.1| hypothetical protein CNBM0510 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 213
Score = 86.3 bits (212), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 70/135 (51%), Gaps = 1/135 (0%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
D+F+ + + + E VRL LWDTAGQE F ++ +Y R + VI +
Sbjct: 44 DTFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDI 103
Query: 108 IDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
+R SF+ W V NE G+ + VLV NK DL D+ V PE+ D ++ LG + T
Sbjct: 104 TNRTSFQNTSKWVDDVRNERGQDVIIVLVGNKTDLNDKRQVTPEDLDKRAKELGVMSIET 163
Query: 167 SVKEDINVNSIFRYL 181
S K NV ++F+ +
Sbjct: 164 SAKAGHNVKTLFKKI 178
Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 28/50 (56%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
E VRL LWDTAGQE F ++ +Y R + VI + +R SF+ W
Sbjct: 66 EDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDITNRTSFQNTSKW 115
>gi|149755446|ref|XP_001489964.1| PREDICTED: ras-related protein Rab-3D-like [Equus caballus]
Length = 219
Score = 86.3 bits (212), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 77/160 (48%), Gaps = 2/160 (1%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
DSF A + + K + ++L +WDTAGQE + IT AYYRGA ++ +
Sbjct: 45 DSFTPAFVSTVGIDFKVKTVYRHDKRIKLQIWDTAGQERYRTITTAYYRGAMGFLLMYDI 104
Query: 108 IDRDSFEAAHSWKMKVENEC-GEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
+++SF A W +++ +LV NK DL D+ VV E+ L+ LG
Sbjct: 105 ANQESFTAVQDWATQIKTYSWDNAQVILVGNKCDLEDERVVPTEDGRRLADDLGFEFFEA 164
Query: 167 SVKEDINVNSIFRYLTTKCLSELRQQEEEYSING-NGLPP 205
S KE++NV +F L ++ + E S G NG P
Sbjct: 165 SAKENVNVKQVFERLVDVICEKMNESLEPSSSPGSNGKGP 204
>gi|47209067|emb|CAF90248.1| unnamed protein product [Tetraodon nigroviridis]
Length = 176
Score = 86.3 bits (212), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 46/127 (36%), Positives = 74/127 (58%), Gaps = 1/127 (0%)
Query: 68 ECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENEC 127
E +GE+V+L +WDTAGQE F +IT++YYR A A ++T+ DSF W ++E
Sbjct: 26 EIKGEKVKLQIWDTAGQERFRSITQSYYRSANALILTYDITCEDSFRCLPEWLKEIEQYA 85
Query: 128 -GEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCL 186
++ T+LV NKIDL ++ V + A+ +++ + TS KE NV +F L + +
Sbjct: 86 NNQVVTILVGNKIDLAEKREVVRQRAEDFAQSQSMLYLETSAKESDNVEKLFLDLACELI 145
Query: 187 SELRQQE 193
E +Q +
Sbjct: 146 REAKQNK 152
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 34/50 (68%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
+GE+V+L +WDTAGQE F +IT++YYR A A ++T+ DSF W
Sbjct: 28 KGEKVKLQIWDTAGQERFRSITQSYYRSANALILTYDITCEDSFRCLPEW 77
>gi|399163151|gb|AFP33151.1| rab-8, partial [Caenorhabditis elegans]
Length = 210
Score = 86.3 bits (212), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 85/160 (53%), Gaps = 3/160 (1%)
Query: 35 AQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAY 94
+ CV+ F D DSF + + + K E +G++++L +WDTAGQE F IT AY
Sbjct: 19 GKTCVL-FRFSD-DSFNNSFISTIGIDFKIRTIELDGKKIKLQIWDTAGQERFRTITTAY 76
Query: 95 YRGAQACVITFSTIDRDSFEAAHSWKMKV-ENECGEIPTVLVQNKIDLLDQSVVAPEEAD 153
YRGA ++ + + SFE +W + E+ ++ +++ NK D+ ++ V+ + +
Sbjct: 77 YRGAMGIILVYDITNERSFENIKNWIRNIEEHAASDVERMIIGNKCDIEERREVSRDRGE 136
Query: 154 LLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSELRQQE 193
L+ G + + TS K ++N++ F L S++ Q E
Sbjct: 137 QLAIEYGTKFLETSAKANLNIDEAFFTLARDIKSKMEQNE 176
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 62/126 (49%), Gaps = 12/126 (9%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV------ 60
+G++++L +WDTAGQE F IT AYYRGA ++ + + SFE +W +
Sbjct: 52 DGKKIKLQIWDTAGQERFRTITTAYYRGAMGIILVYDITNERSFENIKNWIRNIEEHAAS 111
Query: 61 SIKRTI--KECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHS 118
++R I +C+ EE R + D Q + TK A+A + ID F A
Sbjct: 112 DVERMIIGNKCDIEERREVSRDRGEQLAIEYGTKFLETSAKANL----NIDEAFFTLARD 167
Query: 119 WKMKVE 124
K K+E
Sbjct: 168 IKSKME 173
>gi|224136446|ref|XP_002326862.1| predicted protein [Populus trichocarpa]
gi|118483707|gb|ABK93747.1| unknown [Populus trichocarpa]
gi|222835177|gb|EEE73612.1| predicted protein [Populus trichocarpa]
Length = 203
Score = 86.3 bits (212), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 74/146 (50%), Gaps = 1/146 (0%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
DS+ ++ + V K E +G+ ++L +WDTAGQE F IT +YYRGA ++ +
Sbjct: 31 DSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDV 90
Query: 108 IDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
D++SF W +++ + + +LV NK DL VV+ E+A + +G M T
Sbjct: 91 TDQESFNNVKQWLNEIDRYASDNVNKLLVGNKSDLTSNKVVSYEQAKAFADEIGIPFMET 150
Query: 167 SVKEDINVNSIFRYLTTKCLSELRQQ 192
S K+ NV F ++ + Q
Sbjct: 151 SAKDATNVEQAFMAMSAAIKDRMASQ 176
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 32/50 (64%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
+G+ ++L +WDTAGQE F IT +YYRGA ++ + D++SF W
Sbjct: 53 DGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQW 102
>gi|50306647|ref|XP_453297.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49642431|emb|CAH00393.1| KLLA0D05313p [Kluyveromyces lactis]
Length = 204
Score = 86.3 bits (212), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 78/149 (52%), Gaps = 1/149 (0%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
D++ + + V K E +G+ V+L +WDTAGQE F IT +YYRGA +I +
Sbjct: 31 DTYTNDYISTIGVDFKIKTVELDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDV 90
Query: 108 IDRDSFEAAHSWKMKVEN-ECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
D++SF +W +++ + +LV NK DL D+ VV E A + ++G + T
Sbjct: 91 TDQESFNNVKTWLQEIDRFGTAGVLKLLVGNKNDLTDKKVVDTEVAKEFADSIGIPFIET 150
Query: 167 SVKEDINVNSIFRYLTTKCLSELRQQEEE 195
S + NV F +T + + +Q+++
Sbjct: 151 SALDSSNVEEAFLIMTKQIKESVAKQQKD 179
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 33/50 (66%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
+G+ V+L +WDTAGQE F IT +YYRGA +I + D++SF +W
Sbjct: 53 DGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKTW 102
>gi|241997950|ref|XP_002433618.1| synaptic vesicle-associated GTP-binding protein, putative [Ixodes
scapularis]
gi|215495377|gb|EEC05018.1| synaptic vesicle-associated GTP-binding protein, putative [Ixodes
scapularis]
Length = 219
Score = 85.9 bits (211), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 71/135 (52%), Gaps = 1/135 (0%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
DSF +A + + K + V+L +WDTAGQE + IT AYYRGA ++ +
Sbjct: 44 DSFTSAFVSTVGIDFKVKTVFRHDKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDV 103
Query: 108 IDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
+ +SF + W +++ + +LV NK D+ D+ VV+ E L+ LG T
Sbjct: 104 TNEESFNSVQDWVTQIKTYSWDNAQVILVGNKCDMEDERVVSTERGKQLADQLGLEFFET 163
Query: 167 SVKEDINVNSIFRYL 181
S KE++NV ++F L
Sbjct: 164 SAKENVNVKAVFERL 178
>gi|300124329|gb|ADJ68051.1| Rab protein [Larimichthys crocea]
Length = 207
Score = 85.9 bits (211), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 84/155 (54%), Gaps = 1/155 (0%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
D+F + + + K E +G++++L +WDTAGQE F IT AYYRGA ++ +
Sbjct: 31 DAFNSTFISTIGIDFKIRTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDI 90
Query: 108 IDRDSFEAAHSWKMKV-ENECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
+ SF+ +W + E+ ++ +++ NK D+ D+ V+ + + L+ G + M T
Sbjct: 91 TNEKSFDNIKNWIRNIEEHASADVERMVLGNKCDVNDKRQVSKDRGEKLALEYGIKFMET 150
Query: 167 SVKEDINVNSIFRYLTTKCLSELRQQEEEYSINGN 201
S K +INV + F +L +++ ++ E + G+
Sbjct: 151 SAKANINVENAFLHLARDIKAKMDKKLEGNNPQGS 185
>gi|157874060|ref|XP_001685525.1| putative ras-related protein rab-2a [Leishmania major strain
Friedlin]
gi|68128597|emb|CAJ08729.1| putative ras-related protein rab-2a [Leishmania major strain
Friedlin]
Length = 211
Score = 85.9 bits (211), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 74/145 (51%), Gaps = 3/145 (2%)
Query: 35 AQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAY 94
++C++ T R FE H + V + +G+ V+L +WDTAGQE F +IT++Y
Sbjct: 19 GKSCLLLQFTDKR--FEPLHDLTIGVEFGARLISIQGKSVKLQIWDTAGQESFRSITRSY 76
Query: 95 YRGAQACVITFSTIDRDSFEAAHSWKMKVE-NECGEIPTVLVQNKIDLLDQSVVAPEEAD 153
YRGA ++ + RD+F SW + N + +L+ NK DL + V+ EE +
Sbjct: 77 YRGASGALLVYDVTRRDTFTHLQSWLEDAKANANTALVIMLIGNKCDLESKRQVSREEGE 136
Query: 154 LLSRALGCRLMRTSVKEDINVNSIF 178
+R G M TS K NV+ F
Sbjct: 137 AFARCNGLMFMETSAKTSQNVDDAF 161
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 34/50 (68%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
+G+ V+L +WDTAGQE F +IT++YYRGA ++ + RD+F SW
Sbjct: 52 QGKSVKLQIWDTAGQESFRSITRSYYRGASGALLVYDVTRRDTFTHLQSW 101
>gi|225465202|ref|XP_002264623.1| PREDICTED: ras-related protein RABD1 [Vitis vinifera]
gi|297739505|emb|CBI29687.3| unnamed protein product [Vitis vinifera]
Length = 202
Score = 85.9 bits (211), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 70/132 (53%), Gaps = 1/132 (0%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
DS+ ++ + V K E +G+ ++L +WDTAGQE F IT +YYRGA +I +
Sbjct: 31 DSYVDSYISTIGVDFKIRTVELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDV 90
Query: 108 IDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
+ +SF W +++ + + +LV NK DL++ VV E A + LG + T
Sbjct: 91 TEMESFNNVKQWLNEIDRYANDSVCKLLVGNKCDLVENKVVDTETAKAFADELGIPFLET 150
Query: 167 SVKEDINVNSIF 178
S K+ INV F
Sbjct: 151 SAKDSINVEQAF 162
>gi|195042188|ref|XP_001991383.1| GH12621 [Drosophila grimshawi]
gi|193901141|gb|EDW00008.1| GH12621 [Drosophila grimshawi]
Length = 204
Score = 85.9 bits (211), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 73/146 (50%), Gaps = 2/146 (1%)
Query: 34 GAQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKA 93
G I F D D+F + + + K E G++++L +WDTAGQE F IT +
Sbjct: 19 GVGKTCILFRFSD-DAFTSTFISTIGIDFKIKTVELRGKKIKLQIWDTAGQERFHTITTS 77
Query: 94 YYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEA 152
YYRGA ++ + + SFE W ++ E + +++ NK D+ D+ VV E
Sbjct: 78 YYRGAMGIMLVYDITNEKSFENIVKWLRNIDEHANEDVEKMILGNKCDMTDKRVVNKERG 137
Query: 153 DLLSRALGCRLMRTSVKEDINVNSIF 178
+ ++R R M TS K +IN+ F
Sbjct: 138 EAIAREHSIRFMETSAKSNINIERAF 163
>gi|74834303|emb|CAI44510.1| rab_C21 [Paramecium tetraurelia]
Length = 234
Score = 85.9 bits (211), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 85/180 (47%), Gaps = 8/180 (4%)
Query: 35 AQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAY 94
++C++ T R F H + V + + ++L +WDTAGQE F +IT++Y
Sbjct: 19 GKSCLLLQFTDSR--FRNEHDATIGVEFGSRNTKINDKTIKLQVWDTAGQEAFKSITRSY 76
Query: 95 YRGAQACVITFSTIDRDSFEAAHSWKMKVEN-ECGEIPTVLVQNKIDLLDQSVVAPEEAD 153
YRG+ ++ F R SFE W +++ C +I LV NKIDL + V EEA
Sbjct: 77 YRGSIGGILVFDVTSRQSFEGVAKWYQEIQGYACDKIEMALVANKIDLDAKREVQTEEAQ 136
Query: 154 LLSRALGCRLMRTSVKEDINVNSIFRYLTTKCL-----SELRQQEEEYSINGNGLPPYTI 208
++ G TS K NV+++F + L E+ +E I G + P T+
Sbjct: 137 AFAKKHGFAYFETSAKTGENVDTVFESMAQTILKRIDSGEIDPSQEVLFIYGIKVGPGTV 196
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 32/50 (64%)
Query: 11 VRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 60
++L +WDTAGQE F +IT++YYRG+ ++ F R SFE W ++
Sbjct: 56 IKLQVWDTAGQEAFKSITRSYYRGSIGGILVFDVTSRQSFEGVAKWYQEI 105
>gi|330845485|ref|XP_003294614.1| Rab GTPase [Dictyostelium purpureum]
gi|325074885|gb|EGC28854.1| Rab GTPase [Dictyostelium purpureum]
Length = 202
Score = 85.9 bits (211), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 74/143 (51%), Gaps = 2/143 (1%)
Query: 64 RTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 123
RTI E G+ ++L +WDTAGQE F IT +YYRGA ++ + D+ +FE W ++
Sbjct: 48 RTI-ELNGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDKLTFENVRQWLQEI 106
Query: 124 EN-ECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLT 182
+ C + +LV NK DL+ + VV A + +L + TS K+ NV F +
Sbjct: 107 DRFACENVNKLLVGNKSDLVAKKVVDYNTAKAFADSLQIPFLETSAKQSTNVEQAFMTMA 166
Query: 183 TKCLSELRQQEEEYSINGNGLPP 205
T+ + L + + + N + P
Sbjct: 167 TEIKNRLTASQPTQTPDKNKVVP 189
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 31/50 (62%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
G+ ++L +WDTAGQE F IT +YYRGA ++ + D+ +FE W
Sbjct: 53 NGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDKLTFENVRQW 102
>gi|347965503|ref|XP_321946.4| AGAP001211-PA [Anopheles gambiae str. PEST]
gi|333470481|gb|EAA01802.5| AGAP001211-PA [Anopheles gambiae str. PEST]
Length = 208
Score = 85.9 bits (211), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 78/161 (48%), Gaps = 3/161 (1%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
D+F + + K + +G++++L +WDTAGQE F IT AYYRGA ++ +
Sbjct: 31 DAFNTTFISTIGIDFKIRTIDLDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDI 90
Query: 108 IDRDSFEAAHSWKMKV-ENECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
SFE +W + EN ++ +L+ NK +L ++ V + L+ G + M T
Sbjct: 91 TQEKSFENIKNWIRNIEENAAADVEKMLLGNKCELNEKRQVTRVRGEQLAVEYGIKFMET 150
Query: 167 SVKEDINVNSIFRYLT--TKCLSELRQQEEEYSINGNGLPP 205
S K INV+ F L KC E R + G+ L P
Sbjct: 151 SAKASINVDDAFFTLARDIKCKMEKRMEANNPPKGGHQLKP 191
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 40/72 (55%), Gaps = 6/72 (8%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVSIKRTI 66
+G++++L +WDTAGQE F IT AYYRGA ++ + SFE +W R I
Sbjct: 53 DGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITQEKSFENIKNW------IRNI 106
Query: 67 KECEGEEVRLML 78
+E +V ML
Sbjct: 107 EENAAADVEKML 118
>gi|410905863|ref|XP_003966411.1| PREDICTED: ras-related protein Rab-3D-like [Takifugu rubripes]
Length = 222
Score = 85.9 bits (211), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 70/135 (51%), Gaps = 1/135 (0%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
DSF +A + + K + ++L +WDTAGQE + IT AYYRGA ++ +
Sbjct: 48 DSFTSAFVSTVGIDFKVKTVFRNDKRIKLQIWDTAGQERYRTITTAYYRGAMGFLLMYDI 107
Query: 108 IDRDSFEAAHSWKMKVENEC-GEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
++DSF+A W +++ +LV NK DL D +V E+ L+ LG +
Sbjct: 108 TNQDSFKAVQDWATQIKTYSWDNAQVILVGNKCDLEDDRLVPTEDGQRLAEELGFQFFEA 167
Query: 167 SVKEDINVNSIFRYL 181
S K++INV +F L
Sbjct: 168 SAKDNINVKQVFERL 182
>gi|321465918|gb|EFX76917.1| hypothetical protein DAPPUDRAFT_106641 [Daphnia pulex]
Length = 211
Score = 85.9 bits (211), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 87/170 (51%), Gaps = 5/170 (2%)
Query: 35 AQACVI-TFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKA 93
+ CV+ FS D+F + + + K E +G++++L +WDTAGQE F IT A
Sbjct: 20 GKTCVLFRFS---EDAFNSTFISTIGIDFKIRTIELDGKKIKLQIWDTAGQERFRTITTA 76
Query: 94 YYRGAQACVITFSTIDRDSFEAAHSWKMKV-ENECGEIPTVLVQNKIDLLDQSVVAPEEA 152
YYRGA ++ + + SF+ +W + E+ ++ +++ NK D+ D+ V+ +
Sbjct: 77 YYRGAMGIMLVYDITNDKSFDNIKNWIRNIEEHASADVEKMILGNKCDMNDKRQVSKDRG 136
Query: 153 DLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSELRQQEEEYSINGNG 202
+ L+ G + M TS K INV F L +++ ++ E +G G
Sbjct: 137 EQLAIEYGIKFMETSAKASINVEDAFFTLARDIKAKMEKKLEASHPSGKG 186
>gi|281202982|gb|EFA77183.1| Rab GTPase [Polysphondylium pallidum PN500]
Length = 199
Score = 85.9 bits (211), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 69/117 (58%), Gaps = 3/117 (2%)
Query: 64 RTIKECE-GEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMK 122
+TI+ E G+ V+L LWDTAGQE F +IT+ +YRG+ ++ + D SF+ +W
Sbjct: 47 KTIRNKETGQTVKLQLWDTAGQERFKSITQTFYRGSHGVIVVYDITDSKSFDRCRNWIED 106
Query: 123 VEN-ECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIF 178
+ N G + +LV NK DL + V E+ L+ LG + + TS K+++ VN++F
Sbjct: 107 INNYSMGGMIMILVGNKSDLPSRKVTY-EQGKALADELGIKFLETSAKDNVGVNAVF 162
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 32/49 (65%)
Query: 8 GEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
G+ V+L LWDTAGQE F +IT+ +YRG+ ++ + D SF+ +W
Sbjct: 55 GQTVKLQLWDTAGQERFKSITQTFYRGSHGVIVVYDITDSKSFDRCRNW 103
>gi|148229101|ref|NP_001083268.1| RAB10, member RAS oncogene family [Xenopus laevis]
gi|37747686|gb|AAH60015.1| MGC68629 protein [Xenopus laevis]
Length = 200
Score = 85.9 bits (211), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 80/160 (50%), Gaps = 3/160 (1%)
Query: 35 AQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAY 94
+ CV+ F D D+F + + K E +G++++L +WDTAGQE F IT +Y
Sbjct: 21 GKTCVL-FRFSD-DAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQERFHTITTSY 78
Query: 95 YRGAQACVITFSTIDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEAD 153
YRGA ++ + + SFE W ++ E + +L+ NK D+ D+ VV + +
Sbjct: 79 YRGAMGIMLVYDITNAKSFENISKWLRNIDEHANEDVERMLLGNKCDMEDKRVVPKAKGE 138
Query: 154 LLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSELRQQE 193
++R G R TS K ++N+ F L L + +E
Sbjct: 139 QIAREHGIRFFETSAKANVNIEKAFLTLAEDILRKTPVKE 178
>gi|118361951|ref|XP_001014203.1| Ras family protein [Tetrahymena thermophila]
gi|89295970|gb|EAR93958.1| Ras family protein [Tetrahymena thermophila SB210]
gi|307777808|dbj|BAJ21300.1| Rab-family small GTPase Rab8B [Tetrahymena thermophila]
Length = 204
Score = 85.9 bits (211), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 78/145 (53%), Gaps = 1/145 (0%)
Query: 47 RDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFS 106
+ SF H + + + ++ +G+ V+L +WDTAGQE F IT+ YY+G+ ++ +S
Sbjct: 32 KKSFTRIHLPTIGIDYEHKYEDVDGKHVKLQIWDTAGQERFKTITQNYYKGSMGIILAYS 91
Query: 107 TIDRDSFEAAHSWKMKV-ENECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMR 165
D ++F+ W ++ E + V++ KID+ DQ V+ +E + L++ G +
Sbjct: 92 VTDPNTFKNIADWMKQISERADPSVKIVIIATKIDMKDQRKVSTQEGEELAQKYGVKFFE 151
Query: 166 TSVKEDINVNSIFRYLTTKCLSELR 190
TS E NV F+ + ++ L ++
Sbjct: 152 TSALEGTNVIEAFKCIASQALQTIQ 176
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 36/55 (65%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVS 61
+G+ V+L +WDTAGQE F IT+ YY+G+ ++ +S D ++F+ W ++S
Sbjct: 55 DGKHVKLQIWDTAGQERFKTITQNYYKGSMGIILAYSVTDPNTFKNIADWMKQIS 109
>gi|344283301|ref|XP_003413410.1| PREDICTED: ras-related protein Rab-3D-like [Loxodonta africana]
Length = 371
Score = 85.9 bits (211), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 78/160 (48%), Gaps = 2/160 (1%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
DSF A + + K + ++L +WDTAGQE + IT AYYRGA ++ +
Sbjct: 197 DSFTPAFVSTVGIDFKVKTVYRHDKRIKLQIWDTAGQERYRTITTAYYRGAMGFLLMYDV 256
Query: 108 IDRDSFEAAHSWKMKVENECGEIPTV-LVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
+++SF A W +++ + V LV NK DL D+ VV E+ L+ LG
Sbjct: 257 ANQESFAAVQDWATQIKTYSWDNAQVLLVGNKCDLEDERVVPTEDGRRLADDLGFEFFEA 316
Query: 167 SVKEDINVNSIFRYLTTKCLSELRQQEEEYSING-NGLPP 205
S KE+INV +F L ++ + E S G NG P
Sbjct: 317 SAKENINVKQVFERLVDVICEKMNESLEPSSSQGSNGKGP 356
>gi|145493011|ref|XP_001432502.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74831508|emb|CAI39319.1| rab_A65 [Paramecium tetraurelia]
gi|124399614|emb|CAK65105.1| unnamed protein product [Paramecium tetraurelia]
Length = 219
Score = 85.9 bits (211), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 44/117 (37%), Positives = 66/117 (56%), Gaps = 1/117 (0%)
Query: 72 EEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGE-I 130
V+L +WDTAGQ+ F IT +YYRGAQ +I + DR+SFE +W +++ E +
Sbjct: 66 HNVKLQIWDTAGQDRFRTITCSYYRGAQGIIIVYDITDRESFENVKTWMAEIDKYASESV 125
Query: 131 PTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLS 187
+LV NK D+ ++ V+ EE LSR TS K IN+ + F ++T L+
Sbjct: 126 NRLLVGNKADITERREVSYEEGLELSRLYQIPFYETSAKSSINIEAAFTHITKNILN 182
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 5 ICEGEE-VRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 60
I GE V+L +WDTAGQ+ F IT +YYRGAQ +I + DR+SFE +W ++
Sbjct: 61 IALGEHNVKLQIWDTAGQDRFRTITCSYYRGAQGIIIVYDITDRESFENVKTWMAEI 117
>gi|410910458|ref|XP_003968707.1| PREDICTED: ras-related protein Rab-30-like [Takifugu rubripes]
Length = 203
Score = 85.9 bits (211), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 77/145 (53%), Gaps = 1/145 (0%)
Query: 50 FEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTID 109
F + V E +GE+V+L +WDTAGQE F +IT++YYR A A ++T+
Sbjct: 34 FPPGQGATIGVDFMIKTVEIKGEKVKLQIWDTAGQERFRSITQSYYRSANALILTYDITC 93
Query: 110 RDSFEAAHSWKMKVENEC-GEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSV 168
DSF W ++E ++ T+LV NKIDL ++ V + A+ +++ + TS
Sbjct: 94 EDSFRCLPEWLREIEQYANNQVVTILVGNKIDLAEKREVVRQRAEDFAQSQSMLYLETSA 153
Query: 169 KEDINVNSIFRYLTTKCLSELRQQE 193
KE NV +F L + + E +Q +
Sbjct: 154 KESDNVEKLFLDLACELIREAKQNK 178
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 34/50 (68%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
+GE+V+L +WDTAGQE F +IT++YYR A A ++T+ DSF W
Sbjct: 54 KGEKVKLQIWDTAGQERFRSITQSYYRSANALILTYDITCEDSFRCLPEW 103
>gi|351710940|gb|EHB13859.1| Ras-related protein Rab-7L1 [Heterocephalus glaber]
Length = 204
Score = 85.9 bits (211), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 84/162 (51%), Gaps = 8/162 (4%)
Query: 47 RDSFEAAHSWKMKVSIK-RTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITF 105
+DSF + + V + ++ + E VRL LWD AGQE F ++T+ YYR A ACVI F
Sbjct: 29 QDSFSKHYKSTVGVDFALKVLQWSDSEMVRLQLWDIAGQERFTSMTRLYYRDASACVIMF 88
Query: 106 STIDRDSFEAAHSWKMKVENE----CGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALG 160
+ +F + WK ++++ GE +P +L+ NK D L V+ ++ D S+ G
Sbjct: 89 DVTNATTFSNSQRWKQDLDSKLTLPSGEPVPCLLLANKCD-LSPWAVSRDQIDRFSKENG 147
Query: 161 -CRLMRTSVKEDINVNSIFRYLTTKCLSELRQQEEEYSINGN 201
TSVKE+ N+N R L K +S R+ S GN
Sbjct: 148 FAGWTETSVKENKNINEAMRVLVEKMMSNCREDVISLSTQGN 189
>gi|242023040|ref|XP_002431944.1| rab21, putative [Pediculus humanus corporis]
gi|212517295|gb|EEB19206.1| rab21, putative [Pediculus humanus corporis]
Length = 218
Score = 85.9 bits (211), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 84/170 (49%), Gaps = 4/170 (2%)
Query: 35 AQACVITFSTIDR---DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAIT 91
+ CV S + R D F + H ++ S + G+ V L +WDTAGQE+F A+
Sbjct: 21 GEGCVGKTSVVLRYVEDKFNSDHITTLQASFVKKKINIAGKAVNLAIWDTAGQEKFHALG 80
Query: 92 KAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENEC-GEIPTVLVQNKIDLLDQSVVAPE 150
YYR + ++ + D DSF +W +++ G+I + NKIDL V +
Sbjct: 81 PIYYRMSNGAILVYDITDEDSFNKVKNWVKELKKMLGGDICLTIAGNKIDLEKDRNVPID 140
Query: 151 EADLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSELRQQEEEYSING 200
A+ S ++G + +TS K ++N++ +F LT + +S Q E S G
Sbjct: 141 VAEEYSSSVGAKHFQTSAKHNLNIDELFLELTQRMISRYDQLEAIKSSKG 190
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 29/49 (59%)
Query: 8 GEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
G+ V L +WDTAGQE+F A+ YYR + ++ + D DSF +W
Sbjct: 60 GKAVNLAIWDTAGQEKFHALGPIYYRMSNGAILVYDITDEDSFNKVKNW 108
>gi|74142282|dbj|BAE31904.1| unnamed protein product [Mus musculus]
gi|74178135|dbj|BAE29855.1| unnamed protein product [Mus musculus]
Length = 200
Score = 85.9 bits (211), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 80/160 (50%), Gaps = 3/160 (1%)
Query: 35 AQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAY 94
+ CV+ F D D+F + + K E +G++++L +WDTAGQE F IT +Y
Sbjct: 21 GKTCVL-FRFSD-DAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQERFHTITTSY 78
Query: 95 YRGAQACVITFSTIDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEAD 153
YRGA ++ + + SFE W ++ E + +L+ NK D+ D+ VV + +
Sbjct: 79 YRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDMERMLLGNKCDMDDKRVVPKGKGE 138
Query: 154 LLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSELRQQE 193
++R G R TS K +IN+ F L L + +E
Sbjct: 139 QIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVKE 178
>gi|167384556|ref|XP_001737005.1| GTP-binding protein YPTM2 [Entamoeba dispar SAW760]
gi|165900423|gb|EDR26744.1| GTP-binding protein YPTM2, putative [Entamoeba dispar SAW760]
Length = 206
Score = 85.9 bits (211), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 55/126 (43%), Positives = 69/126 (54%), Gaps = 4/126 (3%)
Query: 58 MKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAH 117
+ V K I +G+ V+L LWDTAGQE F IT +YYRG C+I + D SFE
Sbjct: 47 IGVDFKSRIINYQGKTVKLQLWDTAGQERFRNITSSYYRGTHGCLIVYDVTDITSFEKIT 106
Query: 118 SWKMKVENECGEIPTVL-VQNKIDLLDQSVVAPEEADLLSR-ALGCRLMRTSVKEDINVN 175
W ++ N+C P +L V NKID D +VV E A+ R + G R MR S K NV
Sbjct: 107 YWINEL-NDCSTKPEILVVGNKIDSED-AVVTSEVAEKFCRLSGGLRSMRCSAKTGENVE 164
Query: 176 SIFRYL 181
SIF L
Sbjct: 165 SIFNVL 170
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 31/50 (62%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
+G+ V+L LWDTAGQE F IT +YYRG C+I + D SFE W
Sbjct: 59 QGKTVKLQLWDTAGQERFRNITSSYYRGTHGCLIVYDVTDITSFEKITYW 108
>gi|410076036|ref|XP_003955600.1| hypothetical protein KAFR_0B01660 [Kazachstania africana CBS 2517]
gi|372462183|emb|CCF56465.1| hypothetical protein KAFR_0B01660 [Kazachstania africana CBS 2517]
Length = 206
Score = 85.9 bits (211), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 83/169 (49%), Gaps = 8/169 (4%)
Query: 18 TAGQEEFDAITKAYYRG----AQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEE 73
+ + +D+I K G ++C++ D F + + + K + G++
Sbjct: 2 SGNGKNYDSIMKILLIGDSGVGKSCLLV--RFVEDKFSPSFITTIGIDFKIKTVDINGKK 59
Query: 74 VRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENECG-EIPT 132
V+L LWDTAGQE F IT AYYRGA ++ + D +F W V + +
Sbjct: 60 VKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNDHANDDAQL 119
Query: 133 VLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYL 181
+LV NK D +D +V E+ + L++ LG + +S K+D NVN IF L
Sbjct: 120 LLVGNKSD-MDTRLVTYEQGEALAKELGLPFVESSAKDDQNVNEIFFTL 167
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 46/91 (50%), Gaps = 8/91 (8%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVSIKRTI 66
G++V+L LWDTAGQE F IT AYYRGA ++ + D +F W +T+
Sbjct: 56 NGKKVKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQW------FKTV 109
Query: 67 KECEGEEVRLMLWDTAGQEEFDAITKAYYRG 97
+ ++ +L+L + + D Y +G
Sbjct: 110 NDHANDDAQLLL--VGNKSDMDTRLVTYEQG 138
>gi|131804|sp|P24409.1|RAB10_CANFA RecName: Full=Ras-related protein Rab-10
gi|915|emb|CAA39798.1| rab10 [Canis lupus familiaris]
Length = 200
Score = 85.9 bits (211), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 80/160 (50%), Gaps = 3/160 (1%)
Query: 35 AQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAY 94
+ CV+ F D D+F + + K E +G++++L +WDTAGQE F IT +Y
Sbjct: 21 GKTCVL-FRFSD-DAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQERFHTITTSY 78
Query: 95 YRGAQACVITFSTIDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEAD 153
YRGA ++ + + SFE W ++ E + +L+ NK D+ D+ VV + +
Sbjct: 79 YRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKCDMDDKRVVPKGKGE 138
Query: 154 LLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSELRQQE 193
++R G R TS K +IN+ F L L + +E
Sbjct: 139 QIAREHGIRFFETSAKVNINIEKAFLTLAEDILRKTPVKE 178
>gi|403159464|ref|XP_003320075.2| Ras-like protein Rab-8A [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|375168105|gb|EFP75656.2| Ras-like protein Rab-8A [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 212
Score = 85.9 bits (211), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 69/133 (51%), Gaps = 2/133 (1%)
Query: 64 RTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 123
RTI E +G+ ++L +WDTAGQE F IT AYYRGA ++ + D SFE +W +
Sbjct: 50 RTI-ELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDEKSFENIRNWHSNI 108
Query: 124 ENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLT 182
+ E + +L+ NK D +++ ++ + L+ LG M TS K + NV F L
Sbjct: 109 DQHASEGVNKILIGNKSDSVEKKIIQENQGRELAAELGISFMETSAKANTNVEEAFFSLA 168
Query: 183 TKCLSELRQQEEE 195
+ L +E
Sbjct: 169 RDIKTRLIDNNDE 181
Score = 59.3 bits (142), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 33/54 (61%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 60
+G+ ++L +WDTAGQE F IT AYYRGA ++ + D SFE +W +
Sbjct: 55 DGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDEKSFENIRNWHSNI 108
>gi|432099579|gb|ELK28720.1| Ras-related protein Rab-3D [Myotis davidii]
Length = 219
Score = 85.9 bits (211), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 77/160 (48%), Gaps = 2/160 (1%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
DSF A + + K + ++L +WDTAGQE + IT AYYRGA ++ +
Sbjct: 45 DSFTPAFVSTVGIDFKVKTVYRHDKRIKLQIWDTAGQERYRTITTAYYRGAMGFLLMYDV 104
Query: 108 IDRDSFEAAHSWKMKVENEC-GEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
+++SF A W +++ +LV NK DL D+ VV E+ L+ LG
Sbjct: 105 ANQESFTAVQDWATQIKTYSWDNAQVILVGNKCDLEDERVVLAEDGQRLADDLGFEFFEA 164
Query: 167 SVKEDINVNSIFRYLTTKCLSELRQQEEEYSING-NGLPP 205
S KE+INV +F L ++ + + S G NG P
Sbjct: 165 SAKENINVKQVFERLVDVICEKMNESLDPSSSPGSNGKGP 204
>gi|146096690|ref|XP_001467894.1| putative ras-related protein rab-2a [Leishmania infantum JPCM5]
gi|398020934|ref|XP_003863630.1| ras-related protein rab-2a, putative [Leishmania donovani]
gi|134072260|emb|CAM70965.1| putative ras-related protein rab-2a [Leishmania infantum JPCM5]
gi|322501863|emb|CBZ36946.1| ras-related protein rab-2a, putative [Leishmania donovani]
Length = 211
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 74/145 (51%), Gaps = 3/145 (2%)
Query: 35 AQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAY 94
++C++ T R FE H + V + +G+ V+L +WDTAGQE F +IT++Y
Sbjct: 19 GKSCLLLQFTDKR--FEPLHDLTIGVEFGARLISIQGKSVKLQIWDTAGQESFRSITRSY 76
Query: 95 YRGAQACVITFSTIDRDSFEAAHSWKMKVE-NECGEIPTVLVQNKIDLLDQSVVAPEEAD 153
YRGA ++ + RD+F SW + N + +L+ NK DL + V+ EE +
Sbjct: 77 YRGASGALLVYDVTRRDTFTHLQSWLEDAKANANTALVIMLIGNKCDLESKRQVSREEGE 136
Query: 154 LLSRALGCRLMRTSVKEDINVNSIF 178
+R G M TS K NV+ F
Sbjct: 137 AFARCNGLMFMETSAKTSQNVDDAF 161
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 34/50 (68%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
+G+ V+L +WDTAGQE F +IT++YYRGA ++ + RD+F SW
Sbjct: 52 QGKSVKLQIWDTAGQESFRSITRSYYRGASGALLVYDVTRRDTFTHLQSW 101
>gi|341885115|gb|EGT41050.1| hypothetical protein CAEBREN_19821 [Caenorhabditis brenneri]
gi|341885137|gb|EGT41072.1| hypothetical protein CAEBREN_20077 [Caenorhabditis brenneri]
Length = 201
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 80/151 (52%), Gaps = 1/151 (0%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
D+F + + K E +G++++L +WDTAGQE F IT +YYRGA ++ +
Sbjct: 32 DAFNTTFISTIGIDFKIKTIELKGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDI 91
Query: 108 IDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
+ SF+ W ++ E + +++ NK D+ D+ VV+ E + +++ G R T
Sbjct: 92 TNAKSFDNIAKWLRNIDEHASEDVVKMILGNKCDMSDRRVVSRERGEKIAQDHGIRFHET 151
Query: 167 SVKEDINVNSIFRYLTTKCLSELRQQEEEYS 197
S K +++V++ F L L+++ EE S
Sbjct: 152 SAKLNVHVDTAFYDLAEAILAKMPDSTEEQS 182
>gi|290462541|gb|ADD24318.1| Ras-related protein Rab-10 [Lepeophtheirus salmonis]
gi|290562327|gb|ADD38560.1| Ras-related protein Rab-10 [Lepeophtheirus salmonis]
Length = 198
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 79/162 (48%), Gaps = 5/162 (3%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
D+F + + K + G++++L +WDTAGQE F IT +YYR A ++ +
Sbjct: 32 DTFNTTFISTIGIDFKIKTFDLRGKKIKLQIWDTAGQERFHTITTSYYRNAMGIMLVYDV 91
Query: 108 IDRDSFEAAHSWKMKV-ENECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
+ SF+ W + E+ E+ +++ NK D+ D+ V++ E+ + +SR G R + T
Sbjct: 92 TNPKSFDNIAKWLRNIQEHAAEEVDKMILGNKCDMEDKRVISKEKGEAISREYGIRFLET 151
Query: 167 SVKEDINVNSIFRYLTTKCLSELRQQEEEYSINGNGLPPYTI 208
S K ++N+ F L L EE LPP +
Sbjct: 152 SAKTNVNIERAFIELAESILDRTPGIEEPRP----SLPPPNV 189
>gi|431914260|gb|ELK15518.1| Ras-related protein Rab-35 [Pteropus alecto]
Length = 258
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/120 (35%), Positives = 64/120 (53%)
Query: 58 MKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAH 117
+ V K E GE+V+L +WDTAGQE F IT YYRG ++ + +SF
Sbjct: 31 IGVDFKIRTVEINGEKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVK 90
Query: 118 SWKMKVENECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSI 177
W ++ C ++ +LV NK D ++ VV E+A + +G +L TS KE++NV +
Sbjct: 91 RWLHEINQNCDDVCRILVGNKNDDPERKVVETEDAYKFAAQMGIQLFETSAKENVNVEEV 150
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 31/54 (57%)
Query: 8 GEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVS 61
GE+V+L +WDTAGQE F IT YYRG ++ + +SF W +++
Sbjct: 44 GEKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEIN 97
>gi|187609396|pdb|3CPH|A Chain A, Crystal Structure Of Sec4 In Complex With Rab-Gdi
Length = 213
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 86/176 (48%), Gaps = 8/176 (4%)
Query: 11 VRLMLWDTAGQEEFDAITKAYYRG----AQACVITFSTIDRDSFEAAHSWKMKVSIKRTI 66
+R + + + +D+I K G ++C++ D F + + + K
Sbjct: 4 LRTVSASSGNGKSYDSIMKILLIGDSGVGKSCLLV--RFVEDKFNPSFITTIGIDFKIKT 61
Query: 67 KECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV-EN 125
+ G++V+L LWDTAGQE F IT AYYRGA ++ + D +F W V E+
Sbjct: 62 VDINGKKVKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEH 121
Query: 126 ECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYL 181
E +LV NK D ++ VV ++ + L++ LG + +S K D NVN IF L
Sbjct: 122 ANDEAQLLLVGNKSD-METRVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTL 176
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 40/73 (54%), Gaps = 6/73 (8%)
Query: 6 CEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVSIKRT 65
G++V+L LWDTAGQE F IT AYYRGA ++ + D +F W +T
Sbjct: 64 INGKKVKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQW------FKT 117
Query: 66 IKECEGEEVRLML 78
+ E +E +L+L
Sbjct: 118 VNEHANDEAQLLL 130
>gi|340509040|gb|EGR34616.1| hypothetical protein IMG5_005710 [Ichthyophthirius multifiliis]
Length = 210
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 77/135 (57%), Gaps = 2/135 (1%)
Query: 68 ECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENEC 127
+ +G+ V+L +WDTAGQE F IT +YY+GA ++ + DR +F+ +W + +
Sbjct: 53 DIQGKAVKLQIWDTAGQERFKTITSSYYKGAHGIILVYDITDRQTFKDIDNWLAEADKNA 112
Query: 128 GE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCL 186
E + +LV NKIDL ++ V+ +E L+ +LG + + TS NV + F L T+ +
Sbjct: 113 NENVIKLLVGNKIDLENKRQVSFDEGKELADSLGIKFIETSALTASNVENAFVTLATEII 172
Query: 187 SELRQQEEEYSINGN 201
S + Q+ + + GN
Sbjct: 173 SRV-QKSSDNNKGGN 186
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 33/50 (66%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
+G+ V+L +WDTAGQE F IT +YY+GA ++ + DR +F+ +W
Sbjct: 55 QGKAVKLQIWDTAGQERFKTITSSYYKGAHGIILVYDITDRQTFKDIDNW 104
>gi|427787355|gb|JAA59129.1| Putative rab-protein 3 [Rhipicephalus pulchellus]
Length = 221
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 71/135 (52%), Gaps = 1/135 (0%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
DSF +A + + K + V+L +WDTAGQE + IT AYYRGA ++ +
Sbjct: 44 DSFTSAFVSTVGIDFKVKTVFRHDKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDV 103
Query: 108 IDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
+ +SF + W +++ + +LV NK D+ D+ VV+ E L+ LG T
Sbjct: 104 TNEESFNSVQDWVTQIKTYSWDNAQVILVGNKCDMEDERVVSAERGRQLADQLGLEFFET 163
Query: 167 SVKEDINVNSIFRYL 181
S KE++NV ++F L
Sbjct: 164 SAKENVNVKAVFERL 178
>gi|427787329|gb|JAA59116.1| Putative rab-protein 3 [Rhipicephalus pulchellus]
Length = 221
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 71/135 (52%), Gaps = 1/135 (0%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
DSF +A + + K + V+L +WDTAGQE + IT AYYRGA ++ +
Sbjct: 44 DSFTSAFVSTVGIDFKVKTVFRHDKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDV 103
Query: 108 IDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
+ +SF + W +++ + +LV NK D+ D+ VV+ E L+ LG T
Sbjct: 104 TNEESFNSVQDWVTQIKTYSWDNAQVILVGNKCDMEDERVVSAERGRQLADQLGLEFFET 163
Query: 167 SVKEDINVNSIFRYL 181
S KE++NV ++F L
Sbjct: 164 SAKENVNVKAVFERL 178
>gi|1381678|gb|AAB97115.1| small GTP-binding protein [Glycine max]
Length = 202
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 74/159 (46%), Gaps = 6/159 (3%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
DS+ ++ + V K E +G+ ++L +WDTAGQE F IT +YYRGA +I +
Sbjct: 31 DSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDV 90
Query: 108 IDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
D +SF W +++ + + +LV NK DL V+ E A + +G M T
Sbjct: 91 TDEESFNNVKQWLSEIDRYASDNVNKLLVGNKCDLEANRAVSYETAKAFADGIGIPFMET 150
Query: 167 SVKEDINVNSIFRYLTTKCLSELRQQEEEYSINGNGLPP 205
S K+ NV F +T + Q N PP
Sbjct: 151 SAKDATNVEQAFMAMTASIKDRMASQPAN-----NARPP 184
>gi|401427135|ref|XP_003878051.1| putative ras-related protein rab-2a [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322494298|emb|CBZ29597.1| putative ras-related protein rab-2a [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 211
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 74/145 (51%), Gaps = 3/145 (2%)
Query: 35 AQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAY 94
++C++ T R FE H + V + +G+ V+L +WDTAGQE F +IT++Y
Sbjct: 19 GKSCLLLQFTDKR--FEPLHDLTIGVEFGARLISIQGKSVKLQIWDTAGQESFRSITRSY 76
Query: 95 YRGAQACVITFSTIDRDSFEAAHSWKMKVE-NECGEIPTVLVQNKIDLLDQSVVAPEEAD 153
YRGA ++ + RD+F SW + N + +L+ NK DL + V+ EE +
Sbjct: 77 YRGASGALLVYDVTRRDTFTHLQSWLEDAKANANTALVIMLIGNKCDLDSKRQVSREEGE 136
Query: 154 LLSRALGCRLMRTSVKEDINVNSIF 178
+R G M TS K NV+ F
Sbjct: 137 AFARCNGLMFMETSAKTSQNVDDAF 161
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 34/50 (68%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
+G+ V+L +WDTAGQE F +IT++YYRGA ++ + RD+F SW
Sbjct: 52 QGKSVKLQIWDTAGQESFRSITRSYYRGASGALLVYDVTRRDTFTHLQSW 101
>gi|50540198|ref|NP_001002566.1| ras-related protein Rab-10 [Danio rerio]
gi|49902983|gb|AAH76234.1| Zgc:92757 [Danio rerio]
Length = 201
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 80/160 (50%), Gaps = 3/160 (1%)
Query: 35 AQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAY 94
+ CV+ F D D+F + + K E +G++++L +WDTAGQE F IT +Y
Sbjct: 21 GKTCVL-FRFSD-DAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQERFHTITTSY 78
Query: 95 YRGAQACVITFSTIDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEAD 153
YRGA ++ + + SFE W ++ E + +L+ NK D+ D+ VV + +
Sbjct: 79 YRGAMGIMLVYDITNAKSFENISKWLRNIDEHANEDVERMLLGNKCDMEDKRVVPKAKGE 138
Query: 154 LLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSELRQQE 193
+++ G R TS K +IN+ F L L + +E
Sbjct: 139 QIAKEHGIRFFETSAKANINIEKAFLTLAEDILKKTPVKE 178
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 48/88 (54%), Gaps = 7/88 (7%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVSIKRTI 66
+G++++L +WDTAGQE F IT +YYRGA ++ + + SFE W R I
Sbjct: 54 QGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNAKSFENISKW------LRNI 107
Query: 67 KECEGEEV-RLMLWDTAGQEEFDAITKA 93
E E+V R++L + E+ + KA
Sbjct: 108 DEHANEDVERMLLGNKCDMEDKRVVPKA 135
>gi|405978663|gb|EKC43033.1| Ras-related protein Rab-1A [Crassostrea gigas]
Length = 183
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/146 (37%), Positives = 73/146 (50%), Gaps = 7/146 (4%)
Query: 64 RTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 123
RT+ E +G+ VRL +WDTAGQE F IT AYYR A +I + D+DSF+ W +
Sbjct: 30 RTL-EVDGKTVRLQIWDTAGQERFKTITTAYYRNANGILIIYDITDKDSFKNVSKWLEDI 88
Query: 124 ENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLT 182
++ E + VLV NK DL + V EA + LM TS K NV +F L
Sbjct: 89 DHYSNEKVYKVLVGNKADLHPKRAVDYAEAKNFADTHNISLMETSAKTSNNVEQLFATLA 148
Query: 183 TKCLSELRQQEEEYSINGNGLPPYTI 208
S+L+ E I + P TI
Sbjct: 149 ----SDLKHASENGHIK-DDTPTITI 169
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 32/51 (62%)
Query: 6 CEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
+G+ VRL +WDTAGQE F IT AYYR A +I + D+DSF+ W
Sbjct: 34 VDGKTVRLQIWDTAGQERFKTITTAYYRNANGILIIYDITDKDSFKNVSKW 84
>gi|12052826|emb|CAB66585.1| hypothetical protein [Homo sapiens]
gi|190689585|gb|ACE86567.1| RAB10, member RAS oncogene family protein [synthetic construct]
gi|190690949|gb|ACE87249.1| RAB10, member RAS oncogene family protein [synthetic construct]
Length = 200
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 79/160 (49%), Gaps = 3/160 (1%)
Query: 35 AQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAY 94
+ CV+ F D D+F + + K E +G++++L +WDTAGQE F IT +Y
Sbjct: 21 GKTCVL-FRFSD-DAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQERFHTITTSY 78
Query: 95 YRGAQACVITFSTIDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEAD 153
YRGA ++ + + SFE W ++ E + +L+ NK D+ D+ VV +
Sbjct: 79 YRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKCDMDDKRVVPKGKGG 138
Query: 154 LLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSELRQQE 193
++R G R TS K +IN+ F L L + +E
Sbjct: 139 QIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVKE 178
>gi|390342568|ref|XP_003725687.1| PREDICTED: uncharacterized protein LOC762666 [Strongylocentrotus
purpuratus]
Length = 633
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 74/145 (51%), Gaps = 1/145 (0%)
Query: 50 FEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTID 109
F + V E GE+V+L +WDTAGQE F +IT++YY A A V+ F
Sbjct: 32 FPPGQGATIGVDFMIKTIEIGGEKVKLQIWDTAGQERFRSITQSYYHSADALVLVFDVTS 91
Query: 110 RDSFEAAHSWKMKVEN-ECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSV 168
++SF A SW +VE ++ +VLV NKIDL V E+ + + R + TS
Sbjct: 92 KESFNALPSWLREVEQYASPKVISVLVGNKIDLGKDREVNEEDGQSFADSHSMRFLETSA 151
Query: 169 KEDINVNSIFRYLTTKCLSELRQQE 193
KE NV+ +F + + + +R E
Sbjct: 152 KESDNVDRLFLDIAVELTNNVRNGE 176
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 36/53 (67%)
Query: 8 GEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 60
GE+V+L +WDTAGQE F +IT++YY A A V+ F ++SF A SW +V
Sbjct: 53 GEKVKLQIWDTAGQERFRSITQSYYHSADALVLVFDVTSKESFNALPSWLREV 105
>gi|318037484|ref|NP_001188027.1| ras-related protein rab-3d [Ictalurus punctatus]
gi|308324635|gb|ADO29452.1| ras-related protein rab-3d [Ictalurus punctatus]
Length = 223
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 79/158 (50%), Gaps = 6/158 (3%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
DSF +A + + K + ++L +WDTAGQE + +T AYYRGA ++ +
Sbjct: 49 DSFTSAFVSTVGIDFKVKTVFRNNKRIKLQIWDTAGQERYRTVTTAYYRGAMGFLLMYDI 108
Query: 108 IDRDSFEAAHSWKMKVENEC-GEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
++DSF A W +++ +LV NK DL D ++ E++ L+ LG +
Sbjct: 109 TNQDSFNAVQDWATQIKTYSWDNAQVILVGNKCDLEDDRLIPTEDSQRLADELGFQFFEA 168
Query: 167 SVKEDINVNSIFRYLTTKCLSELRQQEEEYSINGNGLP 204
S K++INV +F L ++ + ++ G+G P
Sbjct: 169 SAKDNINVKQVFEQLVDVICEKMNE-----TMEGDGGP 201
>gi|190406568|gb|EDV09835.1| GTP-binding protein SAS1 [Saccharomyces cerevisiae RM11-1a]
gi|207345675|gb|EDZ72422.1| YFL005Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|259146187|emb|CAY79446.1| Sec4p [Saccharomyces cerevisiae EC1118]
gi|323355176|gb|EGA87003.1| Sec4p [Saccharomyces cerevisiae VL3]
Length = 215
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 86/176 (48%), Gaps = 8/176 (4%)
Query: 11 VRLMLWDTAGQEEFDAITKAYYRG----AQACVITFSTIDRDSFEAAHSWKMKVSIKRTI 66
+R + + + +D+I K G ++C++ D F + + + K
Sbjct: 4 LRTVSASSGNGKSYDSIMKILLIGDSGVGKSCLLV--RFVEDKFNPSFITTIGIDFKIKT 61
Query: 67 KECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW-KMKVEN 125
+ G++V+L LWDTAGQE F IT AYYRGA ++ + D +F W K E+
Sbjct: 62 VDINGKKVKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEH 121
Query: 126 ECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYL 181
E +LV NK D ++ VV ++ + L++ LG + +S K D NVN IF L
Sbjct: 122 ANDEAQLLLVGNKSD-METRVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTL 176
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 40/72 (55%), Gaps = 6/72 (8%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVSIKRTI 66
G++V+L LWDTAGQE F IT AYYRGA ++ + D +F W +T+
Sbjct: 65 NGKKVKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQW------FKTV 118
Query: 67 KECEGEEVRLML 78
E +E +L+L
Sbjct: 119 NEHANDEAQLLL 130
>gi|17535871|ref|NP_495854.1| Protein RAB-21 [Caenorhabditis elegans]
gi|3879231|emb|CAA91296.1| Protein RAB-21 [Caenorhabditis elegans]
Length = 207
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 86/177 (48%), Gaps = 12/177 (6%)
Query: 35 AQACVITFSTIDR---DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAIT 91
+ CV S + R + F H ++ S + E + L +WDTAGQE++ A+
Sbjct: 19 GEGCVGKSSLVLRFVENKFSCKHLSTIQASFQNKTVNVEDCQADLHIWDTAGQEKYHALG 78
Query: 92 KAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGEIPTVL-VQNKIDLLDQSVVAPE 150
YYRG+ ++ F DR SFE +W ++++ G +L V NKIDL ++ V +
Sbjct: 79 PIYYRGSNGVLLVFDITDRKSFEKVKNWVLEIKTCLGNTAEILIVGNKIDLEEERQVTRQ 138
Query: 151 EADLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSELRQQEEEYSINGNGLPPYT 207
+A+ + + G M TS ++++ ++ F LT K + R + E PP T
Sbjct: 139 DAEAYAESEGALYMETSAQDNVGISDAFESLTAKMIEHSRTRSTE--------PPST 187
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 37/66 (56%), Gaps = 6/66 (9%)
Query: 13 LMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGE 72
L +WDTAGQE++ A+ YYRG+ ++ F DR SFE +W ++ IK C G
Sbjct: 63 LHIWDTAGQEKYHALGPIYYRGSNGVLLVFDITDRKSFEKVKNWVLE------IKTCLGN 116
Query: 73 EVRLML 78
+++
Sbjct: 117 TAEILI 122
>gi|395512525|ref|XP_003760488.1| PREDICTED: ras-related protein Rab-3D [Sarcophilus harrisii]
Length = 219
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 74/136 (54%), Gaps = 3/136 (2%)
Query: 48 DSFEAAHSWKMKVSIK-RTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFS 106
DSF +A + + K +T+ E + V+L +WDTAGQE + IT AYYRGA ++ +
Sbjct: 45 DSFTSAFVSTVGIDFKVKTVYRNE-KRVKLQIWDTAGQERYRTITTAYYRGAMGFLLMYD 103
Query: 107 TIDRDSFEAAHSWKMKVENEC-GEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMR 165
+++SF A W +++ +LV NK DL D+ VV+ E+ L+ LG
Sbjct: 104 VSNQESFNAVQDWATQIKTYSWDNAQVILVGNKCDLEDERVVSTEDGKHLADDLGFEFFE 163
Query: 166 TSVKEDINVNSIFRYL 181
S K++INV +F L
Sbjct: 164 ASAKDNINVKQVFERL 179
>gi|14318517|ref|NP_116650.1| Sec4p [Saccharomyces cerevisiae S288c]
gi|134394|sp|P07560.1|SEC4_YEAST RecName: Full=Ras-related protein SEC4; AltName: Full=Suppressor of
RHO3 protein 6
gi|172566|gb|AAA35032.1| ras-like protein [Saccharomyces cerevisiae]
gi|836749|dbj|BAA09233.1| Ras-related protein [Saccharomyces cerevisiae]
gi|51013137|gb|AAT92862.1| YFL005W [Saccharomyces cerevisiae]
gi|151940757|gb|EDN59144.1| small GTP binding protein [Saccharomyces cerevisiae YJM789]
gi|256268867|gb|EEU04218.1| Sec4p [Saccharomyces cerevisiae JAY291]
gi|285811889|tpg|DAA12434.1| TPA: Sec4p [Saccharomyces cerevisiae S288c]
gi|349577911|dbj|GAA23078.1| K7_Sec4p [Saccharomyces cerevisiae Kyokai no. 7]
gi|392299666|gb|EIW10759.1| Sec4p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 215
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 86/176 (48%), Gaps = 8/176 (4%)
Query: 11 VRLMLWDTAGQEEFDAITKAYYRG----AQACVITFSTIDRDSFEAAHSWKMKVSIKRTI 66
+R + + + +D+I K G ++C++ D F + + + K
Sbjct: 4 LRTVSASSGNGKSYDSIMKILLIGDSGVGKSCLLV--RFVEDKFNPSFITTIGIDFKIKT 61
Query: 67 KECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW-KMKVEN 125
+ G++V+L LWDTAGQE F IT AYYRGA ++ + D +F W K E+
Sbjct: 62 VDINGKKVKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEH 121
Query: 126 ECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYL 181
E +LV NK D ++ VV ++ + L++ LG + +S K D NVN IF L
Sbjct: 122 ANDEAQLLLVGNKSD-METRVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTL 176
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 40/71 (56%), Gaps = 6/71 (8%)
Query: 8 GEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVSIKRTIK 67
G++V+L LWDTAGQE F IT AYYRGA ++ + D +F W +T+
Sbjct: 66 GKKVKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQW------FKTVN 119
Query: 68 ECEGEEVRLML 78
E +E +L+L
Sbjct: 120 EHANDEAQLLL 130
>gi|91093088|ref|XP_969292.1| PREDICTED: similar to ras-related protein Rab-3C, putative
[Tribolium castaneum]
Length = 219
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 71/135 (52%), Gaps = 1/135 (0%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
DSF +A + + K + V+L +WDTAGQE + IT AYYRGA ++ +
Sbjct: 43 DSFTSAFVSTVGIDFKVKTVFRHDKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDI 102
Query: 108 IDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
+ +SF + W +++ + +LV NK D+ D+ V++ E L+ LG T
Sbjct: 103 TNEESFNSVQDWVTQIKTYSWDNAQVILVGNKCDMEDERVISFERGKQLAEQLGVEFFET 162
Query: 167 SVKEDINVNSIFRYL 181
S KE+INV ++F L
Sbjct: 163 SAKENINVKAVFERL 177
>gi|432856212|ref|XP_004068408.1| PREDICTED: ras-related protein Rab-8A-like [Oryzias latipes]
Length = 206
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 87/167 (52%), Gaps = 3/167 (1%)
Query: 35 AQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAY 94
+ CV+ F D D+F + + + K + G++++L +WDTAGQE F IT AY
Sbjct: 20 GKTCVL-FRFAD-DAFNSTFISTIGIDFKIRTIDLNGKKIKLQIWDTAGQERFRTITTAY 77
Query: 95 YRGAQACVITFSTIDRDSFEAAHSWKMKV-ENECGEIPTVLVQNKIDLLDQSVVAPEEAD 153
YRGA ++ + + SFE +W + E+ ++ +++ NK D+ D+ V+ E +
Sbjct: 78 YRGAMGIMLVYDITNEKSFENIKNWIRNIEEHASADVERMVLGNKCDVNDRRQVSKERGE 137
Query: 154 LLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSELRQQEEEYSING 200
L+ G + M TS K +INV + F L +++ ++ E + G
Sbjct: 138 QLALEYGIKFMETSAKANINVENAFLTLARDIKAKMDKKLEGNNPQG 184
>gi|399163161|gb|AFP33156.1| rab-21, partial [Caenorhabditis elegans]
Length = 206
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 86/177 (48%), Gaps = 12/177 (6%)
Query: 35 AQACVITFSTIDR---DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAIT 91
+ CV S + R + F H ++ S + E + L +WDTAGQE++ A+
Sbjct: 18 GEGCVGKSSLVLRFVENKFSCKHLSTIQASFQNKTVNVEDCQADLHIWDTAGQEKYHALG 77
Query: 92 KAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGEIPTVL-VQNKIDLLDQSVVAPE 150
YYRG+ ++ F DR SFE +W ++++ G +L V NKIDL ++ V +
Sbjct: 78 PIYYRGSNGVLLVFDITDRKSFEKVKNWVLEIKTCLGNTAEILIVGNKIDLEEERQVTRQ 137
Query: 151 EADLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSELRQQEEEYSINGNGLPPYT 207
+A+ + + G M TS ++++ ++ F LT K + R + E PP T
Sbjct: 138 DAEAYAESEGALYMETSAQDNVGISDAFESLTAKMIEHSRTRSTE--------PPST 186
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 37/66 (56%), Gaps = 6/66 (9%)
Query: 13 LMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGE 72
L +WDTAGQE++ A+ YYRG+ ++ F DR SFE +W ++ IK C G
Sbjct: 62 LHIWDTAGQEKYHALGPIYYRGSNGVLLVFDITDRKSFEKVKNWVLE------IKTCLGN 115
Query: 73 EVRLML 78
+++
Sbjct: 116 TAEILI 121
>gi|319411948|emb|CBQ73991.1| probable Ras-related protein Rab-18 [Sporisorium reilianum SRZ2]
Length = 233
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 73/144 (50%), Gaps = 4/144 (2%)
Query: 48 DSFEAAHSWKMKVSIKRTIK--ECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITF 105
D F + + + IK E G+ +L +WDTAGQE F +T +YYRGAQ +I +
Sbjct: 32 DEFLSPEETTATIGVDYRIKGIEVGGKRFKLSIWDTAGQERFRTLTSSYYRGAQGVIIAY 91
Query: 106 STIDRDSFEAAHSWKMKVE--NECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRL 163
RD+F+A +W ++E ++ ++V NK+D VV +E + +GC
Sbjct: 92 DVTQRDTFDALPTWFNELETFTTSDDVVKIIVGNKVDKEFSRVVTTQEGQAFADKMGCLF 151
Query: 164 MRTSVKEDINVNSIFRYLTTKCLS 187
+ S K+ + VN F L + +S
Sbjct: 152 VECSAKKGVGVNGAFDELVNRIIS 175
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 33/49 (67%)
Query: 8 GEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
G+ +L +WDTAGQE F +T +YYRGAQ +I + RD+F+A +W
Sbjct: 57 GKRFKLSIWDTAGQERFRTLTSSYYRGAQGVIIAYDVTQRDTFDALPTW 105
>gi|395323826|gb|EJF56281.1| GTP-binding protein ypt1 [Dichomitus squalens LYAD-421 SS1]
Length = 206
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 74/154 (48%), Gaps = 2/154 (1%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
D+F ++ + V K E EG V+L +WDTAGQE F I AYYRGA ++ +
Sbjct: 31 DAFTDSYLSTIGVDFKIRTIELEGRTVKLQIWDTAGQERFRTIAAAYYRGAHGIIMVYDV 90
Query: 108 IDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
D ++F W ++E E + +++ NK DL+++ VV A + + + T
Sbjct: 91 TDGETFSNVKGWMQEIERYASEGVKKLIIGNKSDLVEKKVVEYSLAKDFADTVSIPFIET 150
Query: 167 SVKEDINVNSIFRYLTTKCLSELRQQEEEYSING 200
S K NV F L E+ Q EE S NG
Sbjct: 151 SAKNSTNVEEAFSLLAKTIKDEVDSQPEEAS-NG 183
Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 31/54 (57%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 60
EG V+L +WDTAGQE F I AYYRGA ++ + D ++F W ++
Sbjct: 53 EGRTVKLQIWDTAGQERFRTIAAAYYRGAHGIIMVYDVTDGETFSNVKGWMQEI 106
>gi|340720309|ref|XP_003398583.1| PREDICTED: ras-related protein Rab-10-like isoform 2 [Bombus
terrestris]
Length = 192
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 78/163 (47%), Gaps = 10/163 (6%)
Query: 34 GAQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKA 93
G I F D D+F + + K E G++++L +WDTAGQE F IT +
Sbjct: 19 GVGKTCILFRFSD-DAFSTTFISTIGIDFKIKTVELRGKKIKLQIWDTAGQERFHTITTS 77
Query: 94 YYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEA 152
YYRGA ++ + + +FE W ++ E + +++ NK D+ D+ V+A E
Sbjct: 78 YYRGAMGIMLVYDITNEKTFENIVKWLRNIDEHANEDVEKMILGNKSDMEDKRVIAREH- 136
Query: 153 DLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSELRQQEEE 195
G R M TS K DIN++ F LT L + +E +
Sbjct: 137 -------GIRFMETSAKADINIDRAFNELTEAILEKTHGKEPQ 172
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 39/71 (54%), Gaps = 6/71 (8%)
Query: 8 GEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVSIKRTIK 67
G++++L +WDTAGQE F IT +YYRGA ++ + + +FE W R I
Sbjct: 55 GKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKTFENIVKW------LRNID 108
Query: 68 ECEGEEVRLML 78
E E+V M+
Sbjct: 109 EHANEDVEKMI 119
>gi|112005093|gb|ABH85387.1| putative GTP binding protein [Beta vulgaris]
Length = 202
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 75/158 (47%), Gaps = 1/158 (0%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
DS+ ++ + V K E +G+ ++L +WDTAGQE F IT +YYRGA +I +
Sbjct: 31 DSYVESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDV 90
Query: 108 IDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
D+ SF+ W +++ + + +LV NK DL VV+ E A + +G + T
Sbjct: 91 TDQQSFDNVKQWLNEIDRYASDNVVKILVGNKSDLTSNKVVSSETAKAFADEIGIPFLET 150
Query: 167 SVKEDINVNSIFRYLTTKCLSELRQQEEEYSINGNGLP 204
S K NV F + + + Q + +P
Sbjct: 151 SAKNSTNVEQAFMTMAAEIKKRVASQPASNATRPTTVP 188
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 32/50 (64%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
+G+ ++L +WDTAGQE F IT +YYRGA +I + D+ SF+ W
Sbjct: 53 DGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQQSFDNVKQW 102
>gi|66472490|ref|NP_001018466.1| ras-related protein Rab-12 [Danio rerio]
gi|63100845|gb|AAH95608.1| Zgc:111945 [Danio rerio]
gi|182889626|gb|AAI65429.1| Zgc:111945 protein [Danio rerio]
Length = 235
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/144 (34%), Positives = 77/144 (53%), Gaps = 2/144 (1%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
D+F A + V K E G+++RL +WDTAGQE F++IT AYYRGA+ V+ +
Sbjct: 58 DTFCEACKSTVGVDFKIKTVELRGKKIRLQIWDTAGQERFNSITSAYYRGAKGIVLVYDI 117
Query: 108 IDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEAD-LLSRALGCRLMR 165
+++FE W ++ E +LV NK+D ++ ++A+ SR G R
Sbjct: 118 TKQETFEDLPKWMKMIDKYASEDAELLLVGNKLDCESDRAISRQQAERFASRISGMRFCE 177
Query: 166 TSVKEDINVNSIFRYLTTKCLSEL 189
S K++ NV+ IF L LS++
Sbjct: 178 ASAKDNFNVDEIFLKLVDDILSKM 201
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 35/49 (71%)
Query: 8 GEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
G+++RL +WDTAGQE F++IT AYYRGA+ V+ + +++FE W
Sbjct: 81 GKKIRLQIWDTAGQERFNSITSAYYRGAKGIVLVYDITKQETFEDLPKW 129
>gi|66814402|ref|XP_641380.1| Rab GTPase [Dictyostelium discoideum AX4]
gi|134228|sp|P20790.1|RAB8A_DICDI RecName: Full=Ras-related protein Rab-8A; AltName: Full=GTP-binding
protein SAS1
gi|167877|gb|AAA33249.1| GTP-binding protein SAS1 [Dictyostelium discoideum]
gi|60469254|gb|EAL67248.1| Rab GTPase [Dictyostelium discoideum AX4]
Length = 208
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 71/146 (48%), Gaps = 4/146 (2%)
Query: 34 GAQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKA 93
G ++ FS DSF + + + K E EG+ ++L +WDTAGQE F IT A
Sbjct: 27 GKSCLLLRFS---EDSFTPSFITTIGIDFKIRTIELEGKRIKLQIWDTAGQERFRTITTA 83
Query: 94 YYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEA 152
YYRGA ++ + D SF +W +E + + +L+ NK D+ ++ VV
Sbjct: 84 YYRGAMGILLVYDVTDEKSFGNIRNWIRNIEQHATDSVNKMLIGNKCDMAEKKVVDSSRG 143
Query: 153 DLLSRALGCRLMRTSVKEDINVNSIF 178
L+ G + + TS K INV F
Sbjct: 144 KSLADEYGIKFLETSAKNSINVEEAF 169
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 31/50 (62%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
EG+ ++L +WDTAGQE F IT AYYRGA ++ + D SF +W
Sbjct: 60 EGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDEKSFGNIRNW 109
>gi|392596937|gb|EIW86259.1| rab-type small GTP-binding protein [Coniophora puteana RWD-64-598
SS2]
Length = 208
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/119 (38%), Positives = 64/119 (53%), Gaps = 2/119 (1%)
Query: 64 RTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 123
RTI E +G+ ++L +WDTAGQE F IT AYYRGA ++ + D SF+ +W +
Sbjct: 49 RTI-ELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFKNIRTWHANI 107
Query: 124 ENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYL 181
E E + +L+ NK D D+ V EE L+ LG + M TS K + V F L
Sbjct: 108 EQHASEGVNKILIGNKSDWTDKRAVTEEEGRELANELGVKFMETSAKVNEGVEEAFFTL 166
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 33/54 (61%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 60
+G+ ++L +WDTAGQE F IT AYYRGA ++ + D SF+ +W +
Sbjct: 54 DGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFKNIRTWHANI 107
>gi|392572292|gb|EIW65444.1| hypothetical protein TREMEDRAFT_70574 [Tremella mesenterica DSM
1558]
Length = 216
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 69/135 (51%), Gaps = 1/135 (0%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
D+F+ + + + E VRL LWDTAGQE F ++ +Y R + VI +
Sbjct: 45 DTFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDI 104
Query: 108 IDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
+R SF W V NE G+ + VLV NK DL D+ V PEE D ++ LG + T
Sbjct: 105 TNRTSFLNTSKWVDDVRNERGQDVIIVLVGNKTDLNDKRQVTPEELDKRAKELGVMSIET 164
Query: 167 SVKEDINVNSIFRYL 181
S K NV ++F+ +
Sbjct: 165 SAKAGHNVKTLFKKI 179
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 27/50 (54%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
E VRL LWDTAGQE F ++ +Y R + VI + +R SF W
Sbjct: 67 EDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDITNRTSFLNTSKW 116
>gi|312071697|ref|XP_003138728.1| rab family protein 3 [Loa loa]
gi|307766114|gb|EFO25348.1| Ras-like protein Rab-3 [Loa loa]
Length = 221
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 71/135 (52%), Gaps = 1/135 (0%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
DSF +A + + K + V+L +WDTAGQE + IT AYYRGA ++ +
Sbjct: 46 DSFTSAFVSTVGIDFKVKTVFRGDKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDI 105
Query: 108 IDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
+ +SF + W +++ E VLV NK D+ D+ VV+ E L+ LG T
Sbjct: 106 TNEESFNSVQDWCTQIKTYSWENAQVVLVGNKCDMDDERVVSCERGKQLADQLGLEFFET 165
Query: 167 SVKEDINVNSIFRYL 181
S KE+INV ++F L
Sbjct: 166 SAKENINVKAVFEKL 180
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 30/48 (62%)
Query: 9 EEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
+ V+L +WDTAGQE + IT AYYRGA ++ + + +SF + W
Sbjct: 70 KRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNSVQDW 117
>gi|409082989|gb|EKM83346.1| hypothetical protein AGABI1DRAFT_110016 [Agaricus bisporus var.
burnettii JB137-S8]
gi|426201961|gb|EKV51884.1| rab-type small GTP-binding protein [Agaricus bisporus var. bisporus
H97]
Length = 209
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/119 (38%), Positives = 63/119 (52%), Gaps = 2/119 (1%)
Query: 64 RTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 123
RTI E +G+ ++L +WDTAGQE F IT AYYRGA ++ + D SF +W +
Sbjct: 49 RTI-ELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRTWHSNI 107
Query: 124 ENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYL 181
E E + +L+ NK D D+ V E+ L+ LG R M TS K + V F L
Sbjct: 108 EQHASEGVNKILIGNKSDWTDKRAVTEEQGRQLAEELGLRFMETSAKVNEGVEEAFFTL 166
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 32/54 (59%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 60
+G+ ++L +WDTAGQE F IT AYYRGA ++ + D SF +W +
Sbjct: 54 DGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRTWHSNI 107
>gi|403417830|emb|CCM04530.1| predicted protein [Fibroporia radiculosa]
Length = 219
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/132 (35%), Positives = 68/132 (51%), Gaps = 1/132 (0%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
D+F ++ + V K E EG+ V+L +WDTAGQE F I AYYRGA V+ +
Sbjct: 31 DAFTDSYLSTIGVDFKIRTIELEGKMVKLQIWDTAGQERFRTIAAAYYRGAHGIVVVYDV 90
Query: 108 IDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
D +SF+ W ++E E + +L+ NK DL+++ VVA A + L + T
Sbjct: 91 TDAESFDNVKGWLQEIERYASENVKKLLIGNKSDLVERKVVAYGSAKEFADELAIPFIET 150
Query: 167 SVKEDINVNSIF 178
S K NV F
Sbjct: 151 SAKTSSNVEEAF 162
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 31/51 (60%)
Query: 6 CEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
EG+ V+L +WDTAGQE F I AYYRGA V+ + D +SF+ W
Sbjct: 52 LEGKMVKLQIWDTAGQERFRTIAAAYYRGAHGIVVVYDVTDAESFDNVKGW 102
>gi|145522135|ref|XP_001446917.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74833715|emb|CAI39332.1| rab_C73 [Paramecium tetraurelia]
gi|124414406|emb|CAK79520.1| unnamed protein product [Paramecium tetraurelia]
Length = 213
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 81/147 (55%), Gaps = 2/147 (1%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
++F+ + + + K + EG+++++ +WDTAGQE F IT+ YY+GA ++ +S
Sbjct: 38 NNFQPTYLSTIGIDFKIKSIDVEGKKIKMQIWDTAGQERFKTITQTYYKGAMGIILVYSI 97
Query: 108 IDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
DR+SF+ +W +++ E + +L+ NKID+ ++ V EE + L+++ G T
Sbjct: 98 DDRESFKNIQNWMSQIKQHASENVCKLLIGNKIDVPNRQVTK-EEGEELAKSYGVSFFET 156
Query: 167 SVKEDINVNSIFRYLTTKCLSELRQQE 193
S KE V+ F + + L ++
Sbjct: 157 SAKEGTQVSDAFYAIAKAVKANLSNEK 183
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 76/156 (48%), Gaps = 15/156 (9%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVSIKRTI 66
EG+++++ +WDTAGQE F IT+ YY+GA ++ +S DR+SF+ +W + I
Sbjct: 60 EGKKIKMQIWDTAGQERFKTITQTYYKGAMGIILVYSIDDRESFKNIQNWMSQ------I 113
Query: 67 KECEGEEV-RLMLWDT-------AGQEEFDAITKAYYRGAQACVITFSTIDRDSFEA-AH 117
K+ E V +L++ + +EE + + K+Y T D+F A A
Sbjct: 114 KQHASENVCKLLIGNKIDVPNRQVTKEEGEELAKSYGVSFFETSAKEGTQVSDAFYAIAK 173
Query: 118 SWKMKVENECGEIPTVLVQNKIDLLDQSVVAPEEAD 153
+ K + NE P+ I+L + A E+ +
Sbjct: 174 AVKANLSNEKTPNPSAPQNASINLTQNNHAADEKKN 209
>gi|359497565|ref|XP_002265463.2| PREDICTED: GTP-binding protein YPTM2 [Vitis vinifera]
Length = 207
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 73/146 (50%), Gaps = 1/146 (0%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
DS+ ++ + V K E +G+ ++L +WDTAGQE F IT +YYRGA ++ +
Sbjct: 35 DSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDV 94
Query: 108 IDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
D++SF W +++ E + +LV NK DL VV+ E A + +G M T
Sbjct: 95 TDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMET 154
Query: 167 SVKEDINVNSIFRYLTTKCLSELRQQ 192
S K NV F + + + + Q
Sbjct: 155 SAKNATNVEQAFMAMAAEIKNRMASQ 180
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 32/50 (64%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
+G+ ++L +WDTAGQE F IT +YYRGA ++ + D++SF W
Sbjct: 57 DGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQW 106
>gi|357135226|ref|XP_003569212.1| PREDICTED: ras-related protein RIC1-like [Brachypodium distachyon]
Length = 203
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 75/146 (51%), Gaps = 1/146 (0%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
DS+ ++ + V K E +G+ ++L +WDTAGQE F IT +YYRGA ++ +
Sbjct: 31 DSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDV 90
Query: 108 IDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
D++SF W +++ E + +LV NK DL + VV+ E L+ +G + T
Sbjct: 91 TDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLAESRVVSYEAGKALADEIGIPFLET 150
Query: 167 SVKEDINVNSIFRYLTTKCLSELRQQ 192
S K+ NV F + + + + Q
Sbjct: 151 SAKDATNVEKAFMTMAAEIKNRMASQ 176
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 32/50 (64%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
+G+ ++L +WDTAGQE F IT +YYRGA ++ + D++SF W
Sbjct: 53 DGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQW 102
>gi|297833958|ref|XP_002884861.1| hypothetical protein ARALYDRAFT_478519 [Arabidopsis lyrata subsp.
lyrata]
gi|297330701|gb|EFH61120.1| hypothetical protein ARALYDRAFT_478519 [Arabidopsis lyrata subsp.
lyrata]
Length = 205
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 75/140 (53%), Gaps = 2/140 (1%)
Query: 64 RTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 123
RTI++ +G+ ++L +WDTAGQE F IT +YYRGA +I + + +SF W ++
Sbjct: 48 RTIEQ-DGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDCTEMESFNNVKQWLSEI 106
Query: 124 ENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLT 182
+ E + +L+ NK D+++ VV+ E L+ LG + TS K+ INV F +
Sbjct: 107 DRYANESVCKLLIGNKNDMVENKVVSTETGKALADELGIPFLETSAKDSINVEQAFLTIA 166
Query: 183 TKCLSELRQQEEEYSINGNG 202
+ ++ Q +G G
Sbjct: 167 GEIKKKMGSQTNANKTSGPG 186
>gi|227603|prf||1707300A guanine nucleotide binding protein
Length = 208
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/132 (35%), Positives = 68/132 (51%), Gaps = 1/132 (0%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
DS+ ++ + V K E EG+ V+L +WDTAGQE F IT +YYRGA +I +
Sbjct: 31 DSYVDSYISTIGVDFKIRTVEVEGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDI 90
Query: 108 IDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
D +SF W +++ + + VLV NK DL + V A ++ +G + T
Sbjct: 91 TDMESFNNVKQWLDEIDRYANDSVRNVLVGNKCDLAENRAVDTSVAQAYAQEVGIPFLET 150
Query: 167 SVKEDINVNSIF 178
S KE INV F
Sbjct: 151 SAKESINVEEAF 162
Score = 59.7 bits (143), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 31/50 (62%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
EG+ V+L +WDTAGQE F IT +YYRGA +I + D +SF W
Sbjct: 53 EGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDITDMESFNNVKQW 102
>gi|354490303|ref|XP_003507298.1| PREDICTED: ras-related protein Rab-39B-like [Cricetulus griseus]
gi|344236010|gb|EGV92113.1| Ras-related protein Rab-39B [Cricetulus griseus]
Length = 213
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/114 (40%), Positives = 67/114 (58%), Gaps = 2/114 (1%)
Query: 71 GEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW--KMKVENECG 128
G+ ++L +WDTAGQE F +IT+AYYR + ++ F +R SF+ H W + KV +
Sbjct: 55 GKRIKLQIWDTAGQERFRSITRAYYRNSVGGLLLFDITNRRSFQNVHEWLEETKVHVQPY 114
Query: 129 EIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLT 182
+I VLV +K DL Q V EA+ L+ A G + + TS ++ INV F LT
Sbjct: 115 QIVFVLVGHKCDLDTQRQVTRHEAEKLAAAYGMKYIETSARDAINVEKAFTDLT 168
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 33/49 (67%)
Query: 8 GEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
G+ ++L +WDTAGQE F +IT+AYYR + ++ F +R SF+ H W
Sbjct: 55 GKRIKLQIWDTAGQERFRSITRAYYRNSVGGLLLFDITNRRSFQNVHEW 103
>gi|145550507|ref|XP_001460932.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74833727|emb|CAI39336.1| rab_B42 [Paramecium tetraurelia]
gi|124428763|emb|CAK93535.1| unnamed protein product [Paramecium tetraurelia]
Length = 196
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/118 (37%), Positives = 70/118 (59%), Gaps = 2/118 (1%)
Query: 68 ECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV-ENE 126
E EG+ +RL +WDTAGQE F IT Y++GA ++ ++ + +SF+ +W +V +N
Sbjct: 51 EVEGKLMRLQIWDTAGQERFRTITSTYFKGAMGVILVYAVNNLESFQNIQNWMNQVKQNA 110
Query: 127 CGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLTTK 184
C + VLV NK DL D+ VV E+ L+ + G + TS KE IN+ F+ ++ +
Sbjct: 111 CESVIVVLVANKSDLNDR-VVQYEQGKNLADSYGIKFFETSAKEGINIIDTFQCISKQ 167
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 35/54 (64%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 60
EG+ +RL +WDTAGQE F IT Y++GA ++ ++ + +SF+ +W +V
Sbjct: 53 EGKLMRLQIWDTAGQERFRTITSTYFKGAMGVILVYAVNNLESFQNIQNWMNQV 106
>gi|289742273|gb|ADD19884.1| Rab protein 8 [Glossina morsitans morsitans]
Length = 207
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 77/148 (52%), Gaps = 1/148 (0%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
D+F + + K E +G++++L +WDTAGQE F IT AYYRGA ++ +
Sbjct: 31 DAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDI 90
Query: 108 IDRDSFEAAHSWKMKV-ENECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
SFE +W + EN ++ +L+ NK +L ++ V+ E + L+ G + M T
Sbjct: 91 TQEKSFENIKNWIRNIEENASADVEKMLLGNKCELNEKRQVSRERGEQLAVEYGIKFMET 150
Query: 167 SVKEDINVNSIFRYLTTKCLSELRQQEE 194
S K INV F L + +++ ++ E
Sbjct: 151 SAKASINVEEAFLTLASDIKAKMEKRME 178
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 40/72 (55%), Gaps = 6/72 (8%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVSIKRTI 66
+G++++L +WDTAGQE F IT AYYRGA ++ + SFE +W R I
Sbjct: 53 DGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITQEKSFENIKNW------IRNI 106
Query: 67 KECEGEEVRLML 78
+E +V ML
Sbjct: 107 EENASADVEKML 118
>gi|296083547|emb|CBI23542.3| unnamed protein product [Vitis vinifera]
Length = 198
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 73/146 (50%), Gaps = 1/146 (0%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
DS+ ++ + V K E +G+ ++L +WDTAGQE F IT +YYRGA ++ +
Sbjct: 26 DSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDV 85
Query: 108 IDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
D++SF W +++ E + +LV NK DL VV+ E A + +G M T
Sbjct: 86 TDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMET 145
Query: 167 SVKEDINVNSIFRYLTTKCLSELRQQ 192
S K NV F + + + + Q
Sbjct: 146 SAKNATNVEQAFMAMAAEIKNRMASQ 171
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 32/50 (64%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
+G+ ++L +WDTAGQE F IT +YYRGA ++ + D++SF W
Sbjct: 48 DGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQW 97
>gi|397484922|ref|XP_003813614.1| PREDICTED: ras-related protein Rab-8A isoform 2 [Pan paniscus]
Length = 207
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 89/175 (50%), Gaps = 10/175 (5%)
Query: 35 AQACVI-TFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKA 93
+ CV+ FS D+F + + + K E +G+ ++L +WDTAGQE F IT A
Sbjct: 20 GKTCVLFRFS---EDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTA 76
Query: 94 YYRGAQACVITFSTIDRDSFEAAHSWKMKV-ENECGEIPTVLVQNKIDLLDQSVVAPEEA 152
YYRGA ++ + + SF+ +W + E+ ++ +++ NK D+ D+ V+ E
Sbjct: 77 YYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCDVNDKRQVSKERG 136
Query: 153 DLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSELRQQ---EEEYSINGNGLP 204
+ L+ G + M TS K +INV + R+ + RQQ E+ S N G P
Sbjct: 137 EKLALDYGIKFMETSAKANINVEN--RHQSKNGQKIGRQQPPGEQPGSQNHTGPP 189
>gi|395532013|ref|XP_003768067.1| PREDICTED: ras-related protein Rab-13 [Sarcophilus harrisii]
Length = 195
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 80/175 (45%), Gaps = 16/175 (9%)
Query: 34 GAQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKA 93
G +I F+ D+F + + + + K E EG++++L +WDTAGQE F IT A
Sbjct: 20 GKTCLIIRFA---EDNFNSTYISTIGIDFKIRTVEIEGKKIKLQVWDTAGQERFKTITTA 76
Query: 94 YYRGAQACVITFSTIDRDSFEAAHSWKMKV-ENECGEIPTVLVQNKIDLLDQSVVAPEEA 152
YYRGA ++ + D SFE +W + EN + +L+ NK D+ E
Sbjct: 77 YYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCDM--------EVK 128
Query: 153 DLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSELRQQEEEYSINGNGLPPYT 207
L+R G R TS K +NV+ F L L + S N N P T
Sbjct: 129 RKLAREHGIRFFETSAKSSLNVDEAFSSLARDIL----LKSSRRSGNSNKATPTT 179
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 45/80 (56%), Gaps = 7/80 (8%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVSIKRTI 66
EG++++L +WDTAGQE F IT AYYRGA ++ + D SFE +W ++I
Sbjct: 53 EGKKIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNW------MKSI 106
Query: 67 KECEGEEV-RLMLWDTAGQE 85
KE V RL+L + E
Sbjct: 107 KENASAGVERLLLGNKCDME 126
>gi|390478683|ref|XP_003735553.1| PREDICTED: ras-related protein Rab-8A isoform 2 [Callithrix
jacchus]
Length = 207
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 82/163 (50%), Gaps = 5/163 (3%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
D+F + + + K E +G+ ++L +WDTAGQE F IT AYYRGA ++ +
Sbjct: 31 DAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDI 90
Query: 108 IDRDSFEAAHSWKMKV-ENECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
+ SF+ +W + E+ ++ +++ NK D+ D+ V+ E + L+ G + M T
Sbjct: 91 TNEKSFDNIRNWIRNIEEHASADVEKMILGNKCDVNDKRQVSKERGEKLALDYGIKFMET 150
Query: 167 SVKEDINVNSIF----RYLTTKCLSELRQQEEEYSINGNGLPP 205
S K +INV + F R + K +L + S G + P
Sbjct: 151 SAKANINVENAFFTLARDIKAKMDKKLAGNSPQGSNQGVKITP 193
>gi|323305102|gb|EGA58852.1| Sec4p [Saccharomyces cerevisiae FostersB]
gi|323348772|gb|EGA83012.1| Sec4p [Saccharomyces cerevisiae Lalvin QA23]
gi|365765838|gb|EHN07343.1| Sec4p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 215
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 86/176 (48%), Gaps = 8/176 (4%)
Query: 11 VRLMLWDTAGQEEFDAITKAYYRG----AQACVITFSTIDRDSFEAAHSWKMKVSIKRTI 66
+R + + + +D+I K G ++C++ D F + + + K
Sbjct: 4 LRTVSASSGNGKSYDSIMKILLIGDSGVGKSCLLV--RFVEDKFNPSFITTIGIDFKIKT 61
Query: 67 KECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW-KMKVEN 125
+ G++V+L LWDTAGQE F IT AYYRGA ++ + D +F W K E+
Sbjct: 62 VDINGKKVKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEH 121
Query: 126 ECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYL 181
E +LV NK D ++ VV ++ + L++ LG + +S K D NVN IF L
Sbjct: 122 ANDEAQLLLVGNKSD-METRVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTL 176
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 40/72 (55%), Gaps = 6/72 (8%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVSIKRTI 66
G++V+L LWDTAGQE F IT AYYRGA ++ + D +F W +T+
Sbjct: 65 NGKKVKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQW------FKTV 118
Query: 67 KECEGEEVRLML 78
E +E +L+L
Sbjct: 119 NEHANDEAQLLL 130
>gi|149241639|pdb|2EQB|A Chain A, Crystal Structure Of The Rab Gtpase Sec4p, The Sec2p Gef
Domain, And Phosphate Complex
Length = 174
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 70/135 (51%), Gaps = 2/135 (1%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
D F + + + K + G++V+L LWDTAGQE F IT AYYRGA ++ +
Sbjct: 30 DKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQERFRTITTAYYRGAMGIILVYDV 89
Query: 108 IDRDSFEAAHSWKMKV-ENECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
D +F W V E+ E +LV NK D ++ VV ++ + L++ LG + +
Sbjct: 90 TDERTFTNIKQWFKTVNEHANDEAQLLLVGNKSD-METRVVTADQGEALAKELGIPFIES 148
Query: 167 SVKEDINVNSIFRYL 181
S K D NVN IF L
Sbjct: 149 SAKNDDNVNEIFFTL 163
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 40/73 (54%), Gaps = 6/73 (8%)
Query: 6 CEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVSIKRT 65
G++V+L LWDTAGQE F IT AYYRGA ++ + D +F W +T
Sbjct: 51 INGKKVKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQW------FKT 104
Query: 66 IKECEGEEVRLML 78
+ E +E +L+L
Sbjct: 105 VNEHANDEAQLLL 117
>gi|340503618|gb|EGR30169.1| ras oncogene family protein, putative [Ichthyophthirius
multifiliis]
Length = 210
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 76/136 (55%), Gaps = 1/136 (0%)
Query: 68 ECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENEC 127
+ +G+ V+L +WDTAGQE F IT +YY+GA ++ + DR +F+ +W + +
Sbjct: 53 DIQGKAVKLQIWDTAGQERFKTITSSYYKGAHGIILVYDITDRQTFKDIDNWLAEADKNA 112
Query: 128 GE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCL 186
E + +LV NKIDL ++ V+ +E L+ +LG + + TS NV + F L T+
Sbjct: 113 NENVVKLLVGNKIDLENKRQVSFDEGKELADSLGIKFIETSALTANNVENAFVTLATEIK 172
Query: 187 SELRQQEEEYSINGNG 202
S +++ + + N G
Sbjct: 173 SRVQKTTDNKNNNAAG 188
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 33/50 (66%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
+G+ V+L +WDTAGQE F IT +YY+GA ++ + DR +F+ +W
Sbjct: 55 QGKAVKLQIWDTAGQERFKTITSSYYKGAHGIILVYDITDRQTFKDIDNW 104
>gi|326634496|pdb|3QBT|A Chain A, Crystal Structure Of Ocrl1 540-678 In Complex With
Rab8a:gppnhp
gi|326634497|pdb|3QBT|C Chain C, Crystal Structure Of Ocrl1 540-678 In Complex With
Rab8a:gppnhp
gi|326634498|pdb|3QBT|E Chain E, Crystal Structure Of Ocrl1 540-678 In Complex With
Rab8a:gppnhp
gi|326634499|pdb|3QBT|G Chain G, Crystal Structure Of Ocrl1 540-678 In Complex With
Rab8a:gppnhp
gi|355333142|pdb|3TNF|A Chain A, Lida From Legionella In Complex With Active Rab8a
Length = 174
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 72/132 (54%), Gaps = 1/132 (0%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
D+F + + + K E +G+ ++L +WDTAGQE F IT AYYRGA ++ +
Sbjct: 29 DAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDI 88
Query: 108 IDRDSFEAAHSWKMKV-ENECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
+ SF+ +W + E+ ++ +++ NK D+ D+ V+ E + L+ G + M T
Sbjct: 89 TNEKSFDNIRNWIRNIEEHASADVEKMILGNKCDVNDKRQVSKERGEKLALDYGIKFMET 148
Query: 167 SVKEDINVNSIF 178
S K +INV + F
Sbjct: 149 SAKANINVENAF 160
>gi|25188193|ref|NP_741995.1| ras-related protein Rab-39B [Homo sapiens]
gi|284005012|ref|NP_001164858.1| ras-related protein Rab-39B [Oryctolagus cuniculus]
gi|387762991|ref|NP_001248440.1| ras-related protein Rab-39B [Macaca mulatta]
gi|296236798|ref|XP_002763474.1| PREDICTED: ras-related protein Rab-39B [Callithrix jacchus]
gi|297711485|ref|XP_002832370.1| PREDICTED: ras-related protein Rab-39B [Pongo abelii]
gi|332260636|ref|XP_003279390.1| PREDICTED: ras-related protein Rab-39B [Nomascus leucogenys]
gi|332862067|ref|XP_003317848.1| PREDICTED: ras-related protein Rab-39B [Pan troglodytes]
gi|344306232|ref|XP_003421792.1| PREDICTED: ras-related protein Rab-39B-like [Loxodonta africana]
gi|348552706|ref|XP_003462168.1| PREDICTED: ras-related protein Rab-39B-like [Cavia porcellus]
gi|395861015|ref|XP_003802790.1| PREDICTED: ras-related protein Rab-39B [Otolemur garnettii]
gi|397477274|ref|XP_003809998.1| PREDICTED: ras-related protein Rab-39B [Pan paniscus]
gi|402911919|ref|XP_003918548.1| PREDICTED: ras-related protein Rab-39B [Papio anubis]
gi|403306959|ref|XP_003943983.1| PREDICTED: ras-related protein Rab-39B [Saimiri boliviensis
boliviensis]
gi|426398054|ref|XP_004065217.1| PREDICTED: ras-related protein Rab-39B [Gorilla gorilla gorilla]
gi|27734447|sp|Q96DA2.1|RB39B_HUMAN RecName: Full=Ras-related protein Rab-39B
gi|16307251|gb|AAH09714.1| RAB39B, member RAS oncogene family [Homo sapiens]
gi|21740216|emb|CAD39120.1| hypothetical protein [Homo sapiens]
gi|57209093|emb|CAI41468.1| RAB39B, member RAS oncogene family [Homo sapiens]
gi|117646510|emb|CAL38722.1| hypothetical protein [synthetic construct]
gi|119593032|gb|EAW72626.1| RAB39B, member RAS oncogene family [Homo sapiens]
gi|167045841|gb|ABZ10509.1| RAB39B, member RAS oncogene family (predicted) [Callithrix jacchus]
gi|217418289|gb|ACK44293.1| RAB39B, member RAS oncogene family (predicted) [Oryctolagus
cuniculus]
gi|261859722|dbj|BAI46383.1| RAB39B, member RAS oncogene family [synthetic construct]
gi|351704267|gb|EHB07186.1| Ras-related protein Rab-39B [Heterocephalus glaber]
gi|355705311|gb|EHH31236.1| hypothetical protein EGK_21125 [Macaca mulatta]
gi|355757848|gb|EHH61373.1| hypothetical protein EGM_19373 [Macaca fascicularis]
gi|380809420|gb|AFE76585.1| ras-related protein Rab-39B [Macaca mulatta]
gi|444510549|gb|ELV09633.1| Ras-related protein Rab-39B [Tupaia chinensis]
Length = 213
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/114 (40%), Positives = 67/114 (58%), Gaps = 2/114 (1%)
Query: 71 GEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW--KMKVENECG 128
G+ ++L +WDTAGQE F +IT+AYYR + ++ F +R SF+ H W + KV +
Sbjct: 55 GKRIKLQIWDTAGQERFRSITRAYYRNSVGGLLLFDITNRRSFQNVHEWLEETKVHVQPY 114
Query: 129 EIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLT 182
+I VLV +K DL Q V EA+ L+ A G + + TS ++ INV F LT
Sbjct: 115 QIVFVLVGHKCDLDTQRQVTRHEAEKLAAAYGMKYIETSARDAINVEKAFTDLT 168
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 33/49 (67%)
Query: 8 GEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
G+ ++L +WDTAGQE F +IT+AYYR + ++ F +R SF+ H W
Sbjct: 55 GKRIKLQIWDTAGQERFRSITRAYYRNSVGGLLLFDITNRRSFQNVHEW 103
>gi|348521982|ref|XP_003448505.1| PREDICTED: ras-related protein Rab-12-like [Oreochromis niloticus]
Length = 243
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/144 (34%), Positives = 78/144 (54%), Gaps = 2/144 (1%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
D+F A + V K E G+++RL +WDTAGQE F++IT AYYRGA+ V+ +
Sbjct: 66 DTFCEACKSTVGVDFKIKTVELRGKKIRLQIWDTAGQERFNSITSAYYRGAKGIVLVYDI 125
Query: 108 IDRDSFEAAHSW-KMKVENECGEIPTVLVQNKIDLLDQSVVAPEEAD-LLSRALGCRLMR 165
+++FE W KM + E +LV NK+D +++ ++ + SR G R
Sbjct: 126 TKQETFEDLPKWMKMIDKYASEEAELLLVGNKLDCETDRIISRQQGERFASRISGMRFCE 185
Query: 166 TSVKEDINVNSIFRYLTTKCLSEL 189
S K++ NV+ IF L LS++
Sbjct: 186 ASAKDNFNVDEIFLKLVDDILSKM 209
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 45/71 (63%), Gaps = 6/71 (8%)
Query: 8 GEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVSIKRTIK 67
G+++RL +WDTAGQE F++IT AYYRGA+ V+ + +++FE W MK+ I
Sbjct: 89 GKKIRLQIWDTAGQERFNSITSAYYRGAKGIVLVYDITKQETFEDLPKW-MKM-----ID 142
Query: 68 ECEGEEVRLML 78
+ EE L+L
Sbjct: 143 KYASEEAELLL 153
>gi|336365713|gb|EGN94062.1| hypothetical protein SERLA73DRAFT_77997 [Serpula lacrymans var.
lacrymans S7.3]
gi|336378321|gb|EGO19479.1| hypothetical protein SERLADRAFT_401850 [Serpula lacrymans var.
lacrymans S7.9]
Length = 210
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/119 (38%), Positives = 63/119 (52%), Gaps = 2/119 (1%)
Query: 64 RTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 123
RTI E +G+ ++L +WDTAGQE F IT AYYRGA ++ + D SF +W +
Sbjct: 49 RTI-ELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRTWHANI 107
Query: 124 ENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYL 181
E E + +L+ NK D D+ V E+ L+ LG R M TS K + V F L
Sbjct: 108 EQHASEGVNKILIGNKSDWTDKRAVTEEQGRELAEELGIRFMETSAKVNDGVEEAFFTL 166
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 32/54 (59%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 60
+G+ ++L +WDTAGQE F IT AYYRGA ++ + D SF +W +
Sbjct: 54 DGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRTWHANI 107
>gi|388502282|gb|AFK39207.1| unknown [Lotus japonicus]
Length = 209
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 73/146 (50%), Gaps = 1/146 (0%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
DS+ ++ + V K E +G+ ++L +WDTAGQE F IT +YYRGA ++ +
Sbjct: 31 DSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDV 90
Query: 108 IDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
D++SF W +++ E + +LV NK DL VV+ E A + +G M T
Sbjct: 91 TDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMET 150
Query: 167 SVKEDINVNSIFRYLTTKCLSELRQQ 192
S K NV F + + + + Q
Sbjct: 151 SAKNATNVEQAFMAMAAEIKNRMASQ 176
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 32/50 (64%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
+G+ ++L +WDTAGQE F IT +YYRGA ++ + D++SF W
Sbjct: 53 DGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQW 102
>gi|224083679|ref|XP_002307084.1| predicted protein [Populus trichocarpa]
gi|222856533|gb|EEE94080.1| predicted protein [Populus trichocarpa]
Length = 207
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 74/152 (48%), Gaps = 6/152 (3%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
D F+ + + + E +RL LWDTAGQE F ++ +Y R + VI +
Sbjct: 32 DKFDTTYQATIGIDFLSKTMYLEDRTIRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDV 91
Query: 108 IDRDSFEAAHSWKMKVENE-CGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
+R SF W +V E G++ VLV NK DL+D+ V+ EE D +R G + T
Sbjct: 92 ANRQSFLNTSKWIEEVRTERGGDVIVVLVGNKTDLVDKRQVSIEEGDGKAREFGVMFIET 151
Query: 167 SVKEDINVNSIFRYLTT-----KCLSELRQQE 193
S K N+ +FR + + LS +Q++
Sbjct: 152 SAKAGFNIKPLFRKIAAALPGMETLSSTKQED 183
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 31/58 (53%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVSIKR 64
E +RL LWDTAGQE F ++ +Y R + VI + +R SF W +V +R
Sbjct: 54 EDRTIRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSKWIEEVRTER 111
>gi|30424726|ref|NP_780331.1| ras-related protein Rab-39B [Mus musculus]
gi|46577034|sp|Q8BHC1.1|RB39B_MOUSE RecName: Full=Ras-related protein Rab-39B
gi|26332977|dbj|BAC30206.1| unnamed protein product [Mus musculus]
gi|26339664|dbj|BAC33503.1| unnamed protein product [Mus musculus]
gi|29747805|gb|AAH50853.1| RAB39B, member RAS oncogene family [Mus musculus]
gi|30851610|gb|AAH52472.1| RAB39B, member RAS oncogene family [Mus musculus]
gi|74141396|dbj|BAE35978.1| unnamed protein product [Mus musculus]
gi|112293041|dbj|BAF02898.1| Rab39B [Mus musculus]
gi|148697273|gb|EDL29220.1| RAB39B, member RAS oncogene family [Mus musculus]
Length = 213
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/114 (40%), Positives = 67/114 (58%), Gaps = 2/114 (1%)
Query: 71 GEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW--KMKVENECG 128
G+ ++L +WDTAGQE F +IT+AYYR + ++ F +R SF+ H W + KV +
Sbjct: 55 GKRIKLQIWDTAGQERFRSITRAYYRNSVGGLLLFDITNRRSFQNVHEWLEETKVHVQPY 114
Query: 129 EIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLT 182
+I VLV +K DL Q V EA+ L+ A G + + TS ++ INV F LT
Sbjct: 115 QIVFVLVGHKCDLDTQRQVTRHEAEKLAAAYGMKYIETSARDAINVEKAFTDLT 168
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 33/49 (67%)
Query: 8 GEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
G+ ++L +WDTAGQE F +IT+AYYR + ++ F +R SF+ H W
Sbjct: 55 GKRIKLQIWDTAGQERFRSITRAYYRNSVGGLLLFDITNRRSFQNVHEW 103
>gi|167539982|ref|XP_001741487.1| rab5 [Entamoeba dispar SAW760]
gi|165893902|gb|EDR22017.1| rab5, putative [Entamoeba dispar SAW760]
Length = 195
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 63/115 (54%)
Query: 70 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGE 129
+G+ ++ +WDTAGQE + ++T YYRG+ A ++ + SF A W ++ E
Sbjct: 53 DGDTIKFEIWDTAGQERYHSLTPMYYRGSNAALVVYDITSDSSFTQAKKWIDELRGSGNE 112
Query: 130 IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLTTK 184
LV NK DL D V+ EEA+ +R+L + TS K +INVN +F + K
Sbjct: 113 AIIFLVGNKCDLADSRVITKEEAEGYARSLSIDYIETSAKANINVNELFDQIARK 167
>gi|444706397|gb|ELW47739.1| Ras-related protein Rab-7L1 [Tupaia chinensis]
Length = 204
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 84/162 (51%), Gaps = 8/162 (4%)
Query: 47 RDSFEAAHSWKMKVSIK-RTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITF 105
+DSF + + V + ++ + E VRL LWD AGQE F ++T+ YYR A ACVI F
Sbjct: 29 QDSFSKHYKSTVGVDFALKVLQWSDSEMVRLQLWDIAGQERFTSMTRLYYRDASACVIMF 88
Query: 106 STIDRDSFEAAHSWKMKVENEC----GE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALG 160
+ +F + WK ++++ GE +P +L+ NK D L V+ ++ D S+ G
Sbjct: 89 DVTNATTFSNSQRWKQDLDSKLTLPNGEPVPCLLLANKCD-LSPWAVSRDQIDRFSKENG 147
Query: 161 -CRLMRTSVKEDINVNSIFRYLTTKCLSELRQQEEEYSINGN 201
TSVKE+ N+N R L K +S R+ S GN
Sbjct: 148 FTGWTETSVKENKNINEAMRVLIEKMMSNSREDVLSLSTQGN 189
Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVSIKRTI 66
+ E VRL LWD AGQE F ++T+ YYR A ACVI F + +F + WK + K T+
Sbjct: 53 DSEMVRLQLWDIAGQERFTSMTRLYYRDASACVIMFDVTNATTFSNSQRWKQDLDSKLTL 112
Query: 67 KECEGEEVRLML 78
GE V +L
Sbjct: 113 P--NGEPVPCLL 122
>gi|410989743|ref|XP_004001118.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein Rab-39B [Felis
catus]
Length = 213
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/114 (40%), Positives = 67/114 (58%), Gaps = 2/114 (1%)
Query: 71 GEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW--KMKVENECG 128
G+ ++L +WDTAGQE F +IT+AYYR + ++ F +R SF+ H W + KV +
Sbjct: 55 GKRIKLQIWDTAGQERFRSITRAYYRNSVGGLLLFDITNRRSFQNVHEWLEETKVHVQPY 114
Query: 129 EIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLT 182
+I VLV +K DL Q V EA+ L+ A G + + TS ++ INV F LT
Sbjct: 115 QIVFVLVGHKCDLDTQRQVTRHEAEKLAAAYGMKYIETSARDAINVEKAFTDLT 168
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 33/49 (67%)
Query: 8 GEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
G+ ++L +WDTAGQE F +IT+AYYR + ++ F +R SF+ H W
Sbjct: 55 GKRIKLQIWDTAGQERFRSITRAYYRNSVGGLLLFDITNRRSFQNVHEW 103
>gi|308475031|ref|XP_003099735.1| CRE-RAB-10 protein [Caenorhabditis remanei]
gi|308266390|gb|EFP10343.1| CRE-RAB-10 protein [Caenorhabditis remanei]
Length = 201
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 81/151 (53%), Gaps = 1/151 (0%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
D+F + + K E +G++++L +WDTAGQE F IT +YYRGA ++ +
Sbjct: 32 DAFNTTFISTIGIDFKIKTIELKGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDI 91
Query: 108 IDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
+ SF+ W ++ E + +++ NK D+ D+ VV+ E + +++ G R T
Sbjct: 92 TNAKSFDNIAKWLRNIDEHASEDVVKMILGNKCDMSDRRVVSRERGEKIAQDHGIRFHET 151
Query: 167 SVKEDINVNSIFRYLTTKCLSELRQQEEEYS 197
S K +++V++ F L L+++ + +E S
Sbjct: 152 SAKLNVHVDTAFYDLAEAILAKMPESTDEQS 182
>gi|270013048|gb|EFA09496.1| hypothetical protein TcasGA2_TC010990 [Tribolium castaneum]
Length = 297
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 70/135 (51%), Gaps = 1/135 (0%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
DSF +A + + K + V+L +WDTAGQE + IT AYYRGA ++ +
Sbjct: 121 DSFTSAFVSTVGIDFKVKTVFRHDKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDI 180
Query: 108 IDRDSFEAAHSWKMKVENEC-GEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
+ +SF + W +++ +LV NK D+ D+ V++ E L+ LG T
Sbjct: 181 TNEESFNSVQDWVTQIKTYSWDNAQVILVGNKCDMEDERVISFERGKQLAEQLGVEFFET 240
Query: 167 SVKEDINVNSIFRYL 181
S KE+INV ++F L
Sbjct: 241 SAKENINVKAVFERL 255
>gi|410906827|ref|XP_003966893.1| PREDICTED: ras-related protein Rab-39B-like [Takifugu rubripes]
Length = 213
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 70/122 (57%), Gaps = 2/122 (1%)
Query: 71 GEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW--KMKVENECG 128
G+ ++L +WDTAGQE F +IT+AYYR + ++ F +R SF+ H W + + +
Sbjct: 55 GKRIKLQIWDTAGQERFRSITRAYYRNSVGGLLLFDITNRRSFQNVHDWLEEARSHVQPH 114
Query: 129 EIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSE 188
I +LV +K DL Q V +EA+ L+ A G R + TS ++ INV F LT ++
Sbjct: 115 SIVFLLVGHKCDLEAQRQVTRQEAEKLAGAYGMRYVETSARDAINVEHAFTELTRDIFAQ 174
Query: 189 LR 190
+R
Sbjct: 175 VR 176
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 33/49 (67%)
Query: 8 GEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
G+ ++L +WDTAGQE F +IT+AYYR + ++ F +R SF+ H W
Sbjct: 55 GKRIKLQIWDTAGQERFRSITRAYYRNSVGGLLLFDITNRRSFQNVHDW 103
>gi|325303620|tpg|DAA34562.1| TPA_exp: RAS oncogene family member RAB1 [Amblyomma variegatum]
Length = 206
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 75/154 (48%), Gaps = 1/154 (0%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
D++ ++ + V K E EG+ ++L +WDTAGQE F IT +YYRGA ++ +
Sbjct: 34 DTYTESYISTIGVDFKIRTIELEGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVAYDV 93
Query: 108 IDRDSFEAAHSWKMKVEN-ECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
D++SF W +++ C + +LV NK DL + VV A + LG + T
Sbjct: 94 TDQESFNNVKQWLQEIDRYACENVNKLLVGNKCDLTTKKVVDYTTAKEFADQLGIPFLET 153
Query: 167 SVKEDINVNSIFRYLTTKCLSELRQQEEEYSING 200
S K NV F + + + + E ++ G
Sbjct: 154 SAKNATNVEQAFMTMAAENKNRMGPPTTEANLRG 187
Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 32/50 (64%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
EG+ ++L +WDTAGQE F IT +YYRGA ++ + D++SF W
Sbjct: 56 EGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVAYDVTDQESFNNVKQW 105
>gi|115497388|ref|NP_001069563.1| ras-related protein Rab-39B [Bos taurus]
gi|194228477|ref|XP_001494357.2| PREDICTED: ras-related protein Rab-39B-like [Equus caballus]
gi|301791696|ref|XP_002930817.1| PREDICTED: ras-related protein Rab-39B-like [Ailuropoda
melanoleuca]
gi|311277243|ref|XP_003135565.1| PREDICTED: ras-related protein Rab-39B-like [Sus scrofa]
gi|426257354|ref|XP_004022294.1| PREDICTED: ras-related protein Rab-39B [Ovis aries]
gi|118573268|sp|Q17QU4.1|RB39B_BOVIN RecName: Full=Ras-related protein Rab-39B
gi|109658249|gb|AAI18178.1| RAB39B, member RAS oncogene family [Bos taurus]
gi|281347654|gb|EFB23238.1| hypothetical protein PANDA_021406 [Ailuropoda melanoleuca]
gi|296471117|tpg|DAA13232.1| TPA: ras-related protein Rab-39B [Bos taurus]
gi|431919189|gb|ELK17894.1| Ras-related protein Rab-39B [Pteropus alecto]
gi|440902928|gb|ELR53658.1| Ras-related protein Rab-39B [Bos grunniens mutus]
Length = 213
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/114 (40%), Positives = 67/114 (58%), Gaps = 2/114 (1%)
Query: 71 GEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW--KMKVENECG 128
G+ ++L +WDTAGQE F +IT+AYYR + ++ F +R SF+ H W + KV +
Sbjct: 55 GKRIKLQIWDTAGQERFRSITRAYYRNSVGGLLLFDITNRRSFQNVHEWLEETKVHVQPY 114
Query: 129 EIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLT 182
+I VLV +K DL Q V EA+ L+ A G + + TS ++ INV F LT
Sbjct: 115 QIVFVLVGHKCDLDTQRQVTRHEAEKLAAAYGMKYIETSARDAINVEKAFTDLT 168
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 33/49 (67%)
Query: 8 GEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
G+ ++L +WDTAGQE F +IT+AYYR + ++ F +R SF+ H W
Sbjct: 55 GKRIKLQIWDTAGQERFRSITRAYYRNSVGGLLLFDITNRRSFQNVHEW 103
>gi|363732860|ref|XP_420326.3| PREDICTED: LOW QUALITY PROTEIN: ras-related protein Rab-39B [Gallus
gallus]
Length = 213
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/114 (40%), Positives = 67/114 (58%), Gaps = 2/114 (1%)
Query: 71 GEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW--KMKVENECG 128
G+ ++L +WDTAGQE F +IT+AYYR + ++ F +R SF+ H W + KV +
Sbjct: 55 GKRIKLQIWDTAGQERFRSITRAYYRNSVGGLLLFDITNRRSFQNVHEWLEETKVHVQPY 114
Query: 129 EIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLT 182
+I VLV +K DL Q V EA+ L+ A G + + TS ++ INV F LT
Sbjct: 115 QIVFVLVGHKCDLDTQRQVTRHEAEKLAAAYGMKYIETSARDAINVEKAFTDLT 168
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 33/49 (67%)
Query: 8 GEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
G+ ++L +WDTAGQE F +IT+AYYR + ++ F +R SF+ H W
Sbjct: 55 GKRIKLQIWDTAGQERFRSITRAYYRNSVGGLLLFDITNRRSFQNVHEW 103
>gi|313213452|emb|CBY37260.1| unnamed protein product [Oikopleura dioica]
Length = 119
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 36/61 (59%), Positives = 43/61 (70%)
Query: 71 GEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGEI 130
G + LMLWDTAGQEEF ++T+AYYRGA VI +S D +SF WK +V NECGEI
Sbjct: 55 GISINLMLWDTAGQEEFHSVTRAYYRGAHGAVIVYSASDPESFANVEDWKKRVSNECGEI 114
Query: 131 P 131
P
Sbjct: 115 P 115
Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 30/54 (55%), Positives = 37/54 (68%)
Query: 8 GEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVS 61
G + LMLWDTAGQEEF ++T+AYYRGA VI +S D +SF WK +VS
Sbjct: 55 GISINLMLWDTAGQEEFHSVTRAYYRGAHGAVIVYSASDPESFANVEDWKKRVS 108
>gi|302782443|ref|XP_002972995.1| rab family GTPase [Selaginella moellendorffii]
gi|302805428|ref|XP_002984465.1| rab family GTPase [Selaginella moellendorffii]
gi|300147853|gb|EFJ14515.1| rab family GTPase [Selaginella moellendorffii]
gi|300159596|gb|EFJ26216.1| rab family GTPase [Selaginella moellendorffii]
Length = 202
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 73/146 (50%), Gaps = 1/146 (0%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
DS+ ++ + V K E EG+ ++L +WDTAGQE F IT +YYRGA ++ +
Sbjct: 31 DSYLESYISTIGVDFKIRTVELEGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDV 90
Query: 108 IDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
D++SF W +++ E + +LV NK DL + VV + A + +G + T
Sbjct: 91 TDQESFNNVKQWLNEIDRYASENVNKLLVGNKADLTAKKVVDTQTAKAFADEIGIPFLET 150
Query: 167 SVKEDINVNSIFRYLTTKCLSELRQQ 192
S K NV F + + + + Q
Sbjct: 151 SAKNATNVEQAFMTMAAEIKNRMASQ 176
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 32/50 (64%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
EG+ ++L +WDTAGQE F IT +YYRGA ++ + D++SF W
Sbjct: 53 EGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQW 102
>gi|348511151|ref|XP_003443108.1| PREDICTED: ras-related protein Rab-3D-like [Oreochromis niloticus]
Length = 222
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 69/135 (51%), Gaps = 1/135 (0%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
DSF +A + + K + ++L +WDTAGQE + IT AYYRGA ++ +
Sbjct: 48 DSFTSAFVSTVGIDFKVKTVFRNDKRIKLQIWDTAGQERYRTITTAYYRGAMGFLLMYDI 107
Query: 108 IDRDSFEAAHSWKMKVENEC-GEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
++DSF A W +++ +LV NK DL D ++ E+ L+ LG +
Sbjct: 108 TNQDSFNAVQDWATQIKTYSWDNAQVILVGNKCDLEDDRLIPTEDGQRLAEELGFQFFEA 167
Query: 167 SVKEDINVNSIFRYL 181
S K++INV +F L
Sbjct: 168 SAKDNINVKQVFERL 182
>gi|327287672|ref|XP_003228552.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein Rab-39A-like
[Anolis carolinensis]
Length = 253
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/134 (36%), Positives = 74/134 (55%), Gaps = 2/134 (1%)
Query: 71 GEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW--KMKVENECG 128
G+ ++L LWDTAGQE F +IT++YYR + ++ F +R SFE + W + K+ E
Sbjct: 95 GKRIKLQLWDTAGQERFRSITRSYYRNSVGGLLVFDITNRSSFEHVYDWLDEGKMHAEPF 154
Query: 129 EIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSE 188
+I +LV +K DL + V+ EEA+ L+ G R + TS K+ INV F LT
Sbjct: 155 QIVFILVGHKCDLETERQVSREEAEELASNCGMRYIETSAKDAINVEESFMILTRDIYEL 214
Query: 189 LRQQEEEYSINGNG 202
+++ E G G
Sbjct: 215 VKKGEISVRDGGKG 228
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 33/49 (67%)
Query: 8 GEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
G+ ++L LWDTAGQE F +IT++YYR + ++ F +R SFE + W
Sbjct: 95 GKRIKLQLWDTAGQERFRSITRSYYRNSVGGLLVFDITNRSSFEHVYDW 143
>gi|93279750|pdb|2FU5|C Chain C, Structure Of Rab8 In Complex With Mss4
gi|93279751|pdb|2FU5|D Chain D, Structure Of Rab8 In Complex With Mss4
Length = 183
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 72/132 (54%), Gaps = 1/132 (0%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
D+F + + + K E +G+ ++L +WDTAGQE F IT AYYRGA ++ +
Sbjct: 31 DAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDI 90
Query: 108 IDRDSFEAAHSWKMKV-ENECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
+ SF+ +W + E+ ++ +++ NK D+ D+ V+ E + L+ G + M T
Sbjct: 91 TNEKSFDNIRNWIRNIEEHASADVEKMILGNKCDVNDKRQVSKERGEKLALDYGIKFMET 150
Query: 167 SVKEDINVNSIF 178
S K +INV + F
Sbjct: 151 SAKANINVENAF 162
>gi|348523125|ref|XP_003449074.1| PREDICTED: ras-related protein Rab-3A-like [Oreochromis niloticus]
Length = 219
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 67/135 (49%), Gaps = 1/135 (0%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
DSF A + + K + ++L +WDTAGQE + IT AYYRGA ++ +
Sbjct: 44 DSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDI 103
Query: 108 IDRDSFEAAHSWKMKVENECGEIPTV-LVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
+ DSF A W +++ + V LV NK D+ D+ VV+ E LS LG
Sbjct: 104 TNEDSFNAVQDWSTQIKTYSWDNAQVLLVGNKCDMEDERVVSSERGRQLSEHLGFEFFEA 163
Query: 167 SVKEDINVNSIFRYL 181
S K++INV F L
Sbjct: 164 SAKDNINVKQTFERL 178
>gi|242057717|ref|XP_002458004.1| hypothetical protein SORBIDRAFT_03g025350 [Sorghum bicolor]
gi|241929979|gb|EES03124.1| hypothetical protein SORBIDRAFT_03g025350 [Sorghum bicolor]
Length = 203
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 75/146 (51%), Gaps = 1/146 (0%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
DS+ ++ + V K E +G+ ++L +WDTAGQE F IT +YYRGA ++ +
Sbjct: 31 DSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDV 90
Query: 108 IDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
D++SF W +++ E + +LV NK DL + VV+ E L+ +G + T
Sbjct: 91 TDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLAENRVVSYEAGKALADEIGIPFLET 150
Query: 167 SVKEDINVNSIFRYLTTKCLSELRQQ 192
S K+ NV F + + + + Q
Sbjct: 151 SAKDATNVEKAFMTMAGEIKNRMASQ 176
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 32/50 (64%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
+G+ ++L +WDTAGQE F IT +YYRGA ++ + D++SF W
Sbjct: 53 DGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQW 102
>gi|443689406|gb|ELT91802.1| hypothetical protein CAPTEDRAFT_169557 [Capitella teleta]
Length = 213
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 79/162 (48%), Gaps = 2/162 (1%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
DSF+ + + + E + +RL LWDTAGQE F ++ +Y R + V+ +
Sbjct: 36 DSFDNTYQATIGIDFLSKTMYLEDKTIRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDI 95
Query: 108 IDRDSFEAAHSWKMKVENECG-EIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
+ +SF+ W V E G ++ +LV NK DL D+ V+ EE + ++ LG + T
Sbjct: 96 TNANSFQQTSKWIDDVRTERGTDVIIMLVGNKTDLSDKRQVSTEEGERKAKELGVMFIET 155
Query: 167 SVKEDINVNSIFRYLTTKCLSELRQQEEEYSINGNGLPPYTI 208
S K NV +FR + L + Q+E N L PY +
Sbjct: 156 SAKAGYNVKQLFRRVAA-ALPGMEQKEATKDDNNIVLEPYEV 196
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 38/73 (52%), Gaps = 6/73 (8%)
Query: 6 CEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVSIKRT 65
E + +RL LWDTAGQE F ++ +Y R + V+ + + +SF+ W V +R
Sbjct: 57 LEDKTIRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDITNANSFQQTSKWIDDVRTER- 115
Query: 66 IKECEGEEVRLML 78
G +V +ML
Sbjct: 116 -----GTDVIIML 123
>gi|145545648|ref|XP_001458508.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834260|emb|CAI44498.1| rab_C41 [Paramecium tetraurelia]
gi|124426328|emb|CAK91111.1| unnamed protein product [Paramecium tetraurelia]
Length = 210
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/115 (38%), Positives = 66/115 (57%), Gaps = 1/115 (0%)
Query: 74 VRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGE-IPT 132
V+L +WDTAGQ+ F IT +YYRGAQ +I + DR+SFE +W +++ E +
Sbjct: 59 VKLQIWDTAGQDRFRTITCSYYRGAQGIIIVYDITDRESFENVKTWIAEIDKYASESVNR 118
Query: 133 VLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLS 187
+LV NK D+ ++ V+ EE LSR TS K IN+ + F ++T L+
Sbjct: 119 MLVGNKADITERREVSYEEGLELSRQYQFPFYETSAKSSINIEAAFTHITKNILN 173
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 32/46 (69%)
Query: 11 VRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
V+L +WDTAGQ+ F IT +YYRGAQ +I + DR+SFE +W
Sbjct: 59 VKLQIWDTAGQDRFRTITCSYYRGAQGIIIVYDITDRESFENVKTW 104
>gi|116793841|gb|ABK26899.1| unknown [Picea sitchensis]
gi|224286684|gb|ACN41045.1| unknown [Picea sitchensis]
Length = 203
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 80/161 (49%), Gaps = 7/161 (4%)
Query: 23 EFDAITKAYYRG----AQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLML 78
E+D + K G ++C++ T DS+ ++ + V K E +G+ ++ +
Sbjct: 5 EYDYLFKVLLVGDSSVGKSCLLLRFT--EDSYMESYISTIGVDFKIKTVELDGKTIKFQI 62
Query: 79 WDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGE-IPTVLVQN 137
WDTAGQE F +T +YYRGA +I + D DSF+ W ++E + + +LV N
Sbjct: 63 WDTAGQERFKTVTSSYYRGAHGIIIVYDITDMDSFDHVKHWLTEIERYTSDNVNMILVGN 122
Query: 138 KIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIF 178
K DL ++ V + A + +G + TS K+ NV F
Sbjct: 123 KCDLAEKRAVEQQMAKAFANDVGIPFLETSAKDATNVEQAF 163
Score = 59.3 bits (142), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 31/50 (62%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
+G+ ++ +WDTAGQE F +T +YYRGA +I + D DSF+ W
Sbjct: 54 DGKTIKFQIWDTAGQERFKTVTSSYYRGAHGIIIVYDITDMDSFDHVKHW 103
>gi|395513679|ref|XP_003761050.1| PREDICTED: ras-related protein Rab-8A [Sarcophilus harrisii]
Length = 331
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 78/139 (56%), Gaps = 2/139 (1%)
Query: 64 RTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 123
RTI E +G+ ++L +WDTAGQE F IT AYYRGA ++ + + SF+ +W +
Sbjct: 172 RTI-ELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNI 230
Query: 124 -ENECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLT 182
E+ ++ +++ NK D+ ++ V+ E + L+ G + M TS K +INV + F L
Sbjct: 231 EEHASADVEKMILGNKCDVNERRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLA 290
Query: 183 TKCLSELRQQEEEYSINGN 201
+++ ++ E S GN
Sbjct: 291 RDIKAKMDKKLEGNSPQGN 309
>gi|303388805|ref|XP_003072636.1| Rab GTPase [Encephalitozoon intestinalis ATCC 50506]
gi|303301777|gb|ADM11276.1| Rab GTPase [Encephalitozoon intestinalis ATCC 50506]
Length = 201
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 82/164 (50%), Gaps = 12/164 (7%)
Query: 35 AQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAY 94
+ C++ T + SF + + + IK E EGE V+L +WDTAGQE F AI Y
Sbjct: 20 GKTCLMKRYTDETYSFTQSSTIGVDFKIKSL--EVEGERVKLQIWDTAGQERFRAIISNY 77
Query: 95 YRGAQACVITFSTIDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEAD 153
YRGA +I F ++SF W +V E + +++ NK+D ++ V+ EE
Sbjct: 78 YRGAHGIIIVFDMGSKESFNNLGDWLSEVRKNTNENVEIIILGNKVDDKEKIVITEEE-- 135
Query: 154 LLSRALG------CRLMRTSVKEDINVNSIFRYLTTKCLSELRQ 191
+ R LG TS K++I VN F YLT K + + ++
Sbjct: 136 -IERFLGENNIEKSSFYMTSAKDNICVNDSFEYLTRKLIDKYKK 178
Score = 59.3 bits (142), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 30/50 (60%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
EGE V+L +WDTAGQE F AI YYRGA +I F ++SF W
Sbjct: 53 EGERVKLQIWDTAGQERFRAIISNYYRGAHGIIIVFDMGSKESFNNLGDW 102
>gi|323309243|gb|EGA62464.1| Sec4p [Saccharomyces cerevisiae FostersO]
Length = 186
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 86/176 (48%), Gaps = 8/176 (4%)
Query: 11 VRLMLWDTAGQEEFDAITKAYYRG----AQACVITFSTIDRDSFEAAHSWKMKVSIKRTI 66
+R + + + +D+I K G ++C++ D F + + + K
Sbjct: 4 LRTVSASSGNGKSYDSIMKILLIGDSGVGKSCLLV--RFVEDKFNPSFITTIGIDFKIKT 61
Query: 67 KECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW-KMKVEN 125
+ G++V+L LWDTAGQE F IT AYYRGA ++ + D +F W K E+
Sbjct: 62 VDINGKKVKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEH 121
Query: 126 ECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYL 181
E +LV NK D ++ VV ++ + L++ LG + +S K D NVN F +L
Sbjct: 122 ANDEAQLLLVGNKSD-METRVVTADQGEALAKELGIPFIESSAKNDDNVNEXFFHL 176
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 40/73 (54%), Gaps = 6/73 (8%)
Query: 6 CEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVSIKRT 65
G++V+L LWDTAGQE F IT AYYRGA ++ + D +F W +T
Sbjct: 64 INGKKVKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQW------FKT 117
Query: 66 IKECEGEEVRLML 78
+ E +E +L+L
Sbjct: 118 VNEHANDEAQLLL 130
>gi|223941194|dbj|BAH23089.1| small GTP binding protein Rab6 [Babesia bigemina]
Length = 217
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 73/143 (51%), Gaps = 1/143 (0%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
D F A++ + + + G+ +RL LWDTAGQE F + +Y R + A ++ +
Sbjct: 43 DHFVPAYAATIGIDFLSKVVTVNGKTMRLQLWDTAGQERFRTLMPSYIRDSSAAIVVYDI 102
Query: 108 IDRDSFEAAHSWKMKVENECGEIPT-VLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
R+SF+ W ++ G+ VLV NK DLLD+ V+ +E + ++ GC T
Sbjct: 103 TSRESFDKVGDWIKDIKELRGDKAVIVLVGNKTDLLDKRKVSYDEGEEQAKKFGCLFCET 162
Query: 167 SVKEDINVNSIFRYLTTKCLSEL 189
S K N+N +F + T+ L +
Sbjct: 163 SAKNGDNINDLFNPIATELLKNM 185
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 39/73 (53%), Gaps = 6/73 (8%)
Query: 6 CEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVSIKRT 65
G+ +RL LWDTAGQE F + +Y R + A ++ + R+SF+ W +
Sbjct: 64 VNGKTMRLQLWDTAGQERFRTLMPSYIRDSSAAIVVYDITSRESFDKVGDW------IKD 117
Query: 66 IKECEGEEVRLML 78
IKE G++ ++L
Sbjct: 118 IKELRGDKAVIVL 130
>gi|50752811|ref|XP_413757.1| PREDICTED: ras-related protein Rab-8B [Gallus gallus]
Length = 201
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 82/154 (53%), Gaps = 1/154 (0%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
D+F + + K E +G++++L +WDTAGQE F IT AYYRGA ++ +
Sbjct: 31 DAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDI 90
Query: 108 IDRDSFEAAHSWKMKV-ENECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
+ SF+ +W + E+ ++ +++ NK D+ ++ V+ E+ + L+ G + + T
Sbjct: 91 TNEKSFDNIKNWIRNIEEHASSDVERMILGNKCDMNEKRQVSKEKGEKLAIDYGIKFLET 150
Query: 167 SVKEDINVNSIFRYLTTKCLSELRQQEEEYSING 200
S K INV F L +++L ++ + S +G
Sbjct: 151 SAKSSINVEEAFFTLARDIMTKLNRKMNDSSSSG 184
>gi|390478681|ref|XP_002761905.2| PREDICTED: ras-related protein Rab-8A isoform 1 [Callithrix
jacchus]
Length = 219
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 72/132 (54%), Gaps = 1/132 (0%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
D+F + + + K E +G+ ++L +WDTAGQE F IT AYYRGA ++ +
Sbjct: 31 DAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDI 90
Query: 108 IDRDSFEAAHSWKMKV-ENECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
+ SF+ +W + E+ ++ +++ NK D+ D+ V+ E + L+ G + M T
Sbjct: 91 TNEKSFDNIRNWIRNIEEHASADVEKMILGNKCDVNDKRQVSKERGEKLALDYGIKFMET 150
Query: 167 SVKEDINVNSIF 178
S K +INV + F
Sbjct: 151 SAKANINVENAF 162
>gi|324522597|gb|ADY48087.1| Ras-related protein Rab-3 [Ascaris suum]
Length = 254
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 71/135 (52%), Gaps = 1/135 (0%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
DSF +A + + K + V+L +WDTAGQE + IT AYYRGA ++ +
Sbjct: 79 DSFTSAFVSTVGIDFKVKTVFRGDKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDI 138
Query: 108 IDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
+ +SF + W +++ E VLV NK D+ D+ VV+ E L+ LG T
Sbjct: 139 TNEESFNSVQDWCTQIKTYSWENAQVVLVGNKCDMDDERVVSFERGRQLADQLGLEFFET 198
Query: 167 SVKEDINVNSIFRYL 181
S KE+INV ++F L
Sbjct: 199 SAKENINVKAVFEKL 213
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 30/48 (62%)
Query: 9 EEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
+ V+L +WDTAGQE + IT AYYRGA ++ + + +SF + W
Sbjct: 103 KRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNSVQDW 150
>gi|391330041|ref|XP_003739473.1| PREDICTED: ras-related protein Rab-3-like [Metaseiulus
occidentalis]
Length = 218
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 81/172 (47%), Gaps = 5/172 (2%)
Query: 14 MLWDTAGQEEFDAITKAYYRGAQACVIT---FSTIDRDSFEAAHSWKMKVSIKRTIKECE 70
M D + + FD + K G + T F D DSF +A + + K
Sbjct: 4 MPKDASTDQNFDYMFKILIIGNSSVGKTSFLFRYAD-DSFTSAFVSTVGIDFKVKTVFRH 62
Query: 71 GEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENEC-GE 129
+ V+L +WDTAGQE + IT AYYRGA ++ + + DSF+ W +++
Sbjct: 63 DKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDVTNEDSFKCVQDWVTQIKTYSWDN 122
Query: 130 IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYL 181
VLV NK D+ D+ VV+ + L+ LG TS KE+INV F L
Sbjct: 123 AQVVLVGNKCDMEDERVVSTDRGRQLAEQLGLEFFETSAKENINVKQCFERL 174
>gi|345807749|ref|XP_003435654.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein Rab-39B,
partial [Canis lupus familiaris]
Length = 210
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/114 (40%), Positives = 67/114 (58%), Gaps = 2/114 (1%)
Query: 71 GEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW--KMKVENECG 128
G+ ++L +WDTAGQE F +IT+AYYR + ++ F +R SF+ H W + KV +
Sbjct: 52 GKRIKLQIWDTAGQERFRSITRAYYRNSVGGLLLFDITNRRSFQNVHEWLEETKVHVQPY 111
Query: 129 EIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLT 182
+I VLV +K DL Q V EA+ L+ A G + + TS ++ INV F LT
Sbjct: 112 QIVFVLVGHKCDLDTQRQVTRHEAEKLAAAYGMKYIETSARDAINVEKAFTDLT 165
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 33/49 (67%)
Query: 8 GEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
G+ ++L +WDTAGQE F +IT+AYYR + ++ F +R SF+ H W
Sbjct: 52 GKRIKLQIWDTAGQERFRSITRAYYRNSVGGLLLFDITNRRSFQNVHEW 100
>gi|256085306|ref|XP_002578863.1| rab6 [Schistosoma mansoni]
gi|350645823|emb|CCD59585.1| rab6, putative [Schistosoma mansoni]
Length = 203
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/120 (37%), Positives = 66/120 (55%), Gaps = 1/120 (0%)
Query: 70 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENE-CG 128
E +RL LWDTAGQE F ++ +Y R + A V+ + + SF A W V NE G
Sbjct: 55 EDRTIRLQLWDTAGQERFRSLIPSYIRDSSAAVVVYDICNAGSFHQASKWVDDVRNERGG 114
Query: 129 EIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSE 188
++ +LV NK DL D+ V EE +LL++ L + TS K NV +FR + T+ + +
Sbjct: 115 DVIIILVGNKTDLSDKRKVTTEEGELLAKKLEVMFIETSAKAGYNVKVLFRRIATELVDQ 174
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 28/50 (56%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
E +RL LWDTAGQE F ++ +Y R + A V+ + + SF A W
Sbjct: 55 EDRTIRLQLWDTAGQERFRSLIPSYIRDSSAAVVVYDICNAGSFHQASKW 104
>gi|115437604|ref|NP_001043336.1| Os01g0558600 [Oryza sativa Japonica Group]
gi|109940139|sp|P40392.2|RIC1_ORYSJ RecName: Full=Ras-related protein RIC1
gi|57899331|dbj|BAD87942.1| Ras-related protein RIC1 [Oryza sativa Japonica Group]
gi|57900421|dbj|BAD87657.1| Ras-related protein RIC1 [Oryza sativa Japonica Group]
gi|113532867|dbj|BAF05250.1| Os01g0558600 [Oryza sativa Japonica Group]
gi|125526416|gb|EAY74530.1| hypothetical protein OsI_02420 [Oryza sativa Indica Group]
gi|125570818|gb|EAZ12333.1| hypothetical protein OsJ_02222 [Oryza sativa Japonica Group]
gi|215769435|dbj|BAH01664.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 202
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 75/146 (51%), Gaps = 1/146 (0%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
DS+ ++ + V K E +G+ ++L +WDTAGQE F IT +YYRGA ++ +
Sbjct: 31 DSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDV 90
Query: 108 IDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
D++SF W +++ E + +LV NK DL + VV+ E L+ +G + T
Sbjct: 91 TDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLAENRVVSYEAGKALADEIGIPFLET 150
Query: 167 SVKEDINVNSIFRYLTTKCLSELRQQ 192
S K+ NV F + + + + Q
Sbjct: 151 SAKDATNVEKAFMTMAGEIKNRMASQ 176
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 32/50 (64%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
+G+ ++L +WDTAGQE F IT +YYRGA ++ + D++SF W
Sbjct: 53 DGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQW 102
>gi|440548634|gb|AGC10822.1| Rab-1 [Eriocheir sinensis]
Length = 204
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 70/132 (53%), Gaps = 1/132 (0%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
D++ ++ + V K E +G+ ++L +WDTAGQE F IT +YYRGA ++ + T
Sbjct: 34 DTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDT 93
Query: 108 IDRDSFEAAHSWKMKVEN-ECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
D++SF W +++ C + +LV N+ DL + VV + A + +LG + T
Sbjct: 94 TDQESFNNVKQWLQEIDRYACENVNKLLVGNQCDLTHKKVVDYQTAKEYADSLGIPFLET 153
Query: 167 SVKEDINVNSIF 178
S K NV F
Sbjct: 154 SAKNATNVEQAF 165
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 33/50 (66%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
+G+ ++L +WDTAGQE F IT +YYRGA ++ + T D++SF W
Sbjct: 56 DGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDTTDQESFNNVKQW 105
>gi|410923995|ref|XP_003975467.1| PREDICTED: ras-related protein Rab-8A-like [Takifugu rubripes]
Length = 222
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 82/149 (55%), Gaps = 3/149 (2%)
Query: 48 DSFEAAHSWKMKVSIK-RTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFS 106
D+F + + + K RTI E +G++++L +WDTAGQE F IT AYYRGA ++ +
Sbjct: 47 DAFNSTFISTIGIDFKIRTI-ELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYD 105
Query: 107 TIDRDSFEAAHSWKMKV-ENECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMR 165
+ SF+ +W + E+ ++ +++ NK D+ D+ V+ + + L+ G + M
Sbjct: 106 ITNEKSFDNIKNWIRNIEEHASADVEKMVLGNKCDINDKRQVSKDRGEQLALDYGIKFME 165
Query: 166 TSVKEDINVNSIFRYLTTKCLSELRQQEE 194
TS K +INV + F L S++ + E
Sbjct: 166 TSAKANINVENAFLTLARDIKSKMDTKLE 194
>gi|356525473|ref|XP_003531349.1| PREDICTED: ras-related protein RABH1e-like [Glycine max]
Length = 207
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 6/152 (3%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
D F+ + + + E VRL LWDTAGQE F ++ +Y R + VI +
Sbjct: 32 DKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDV 91
Query: 108 IDRDSFEAAHSWKMKVENECG-EIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
+R SF + W +V E G ++ VLV NK DL+++ V+ EE D SR G + T
Sbjct: 92 ANRQSFLNTNKWVEEVRTERGSDVIIVLVGNKTDLVEKRQVSIEEGDAKSREFGIMFIET 151
Query: 167 SVKEDINVNSIFRYLTT-----KCLSELRQQE 193
S K N+ +FR + + LS +Q++
Sbjct: 152 SAKAGFNIKPLFRKIAAALPGMESLSSTKQED 183
Score = 49.7 bits (117), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 32/58 (55%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVSIKR 64
E VRL LWDTAGQE F ++ +Y R + VI + +R SF + W +V +R
Sbjct: 54 EDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTNKWVEEVRTER 111
>gi|323333722|gb|EGA75114.1| Sec4p [Saccharomyces cerevisiae AWRI796]
Length = 186
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 86/176 (48%), Gaps = 8/176 (4%)
Query: 11 VRLMLWDTAGQEEFDAITKAYYRG----AQACVITFSTIDRDSFEAAHSWKMKVSIKRTI 66
+R + + + +D+I K G ++C++ D F + + + K
Sbjct: 4 LRTVSASSGNGKSYDSIMKILLIGDSGVGKSCLLV--RFVEDKFNPSFITTIGIDFKIKT 61
Query: 67 KECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV-EN 125
+ G++V+L LWDTAGQE F IT AYYRGA ++ + D +F W V E+
Sbjct: 62 VDINGKKVKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEH 121
Query: 126 ECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYL 181
E +LV NK D ++ VV ++ + L++ LG + +S K D NVN F +L
Sbjct: 122 ANDEAQLLLVGNKSD-METRVVTADQGEALAKELGIPFIESSAKNDDNVNEYFFHL 176
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 40/73 (54%), Gaps = 6/73 (8%)
Query: 6 CEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVSIKRT 65
G++V+L LWDTAGQE F IT AYYRGA ++ + D +F W +T
Sbjct: 64 INGKKVKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQW------FKT 117
Query: 66 IKECEGEEVRLML 78
+ E +E +L+L
Sbjct: 118 VNEHANDEAQLLL 130
>gi|350538481|ref|NP_001233833.1| small GTP-binding protein [Solanum lycopersicum]
gi|1053067|gb|AAA80680.1| small GTP-binding protein [Solanum lycopersicum]
Length = 203
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 77/159 (48%), Gaps = 5/159 (3%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
DS+ ++ + V K E +G+ ++L +WDTAGQE F IT +YYRGA +I +
Sbjct: 31 DSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDI 90
Query: 108 IDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
D++SF W +++ E + +LV NK DL D V+ + A + +G M
Sbjct: 91 TDQESFNNVKQWLSEIDRYASENVNKLLVGNKSDLNDNRAVSYDTAKAFADEIGIPFMEA 150
Query: 167 SVKEDINVNSIFRYLTTKCLSELRQQEEEYSINGNGLPP 205
S K NV F + +E++ + + N PP
Sbjct: 151 SAKSATNVEQAFMAMA----AEIKNRMATQPASNNAKPP 185
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 32/50 (64%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
+G+ ++L +WDTAGQE F IT +YYRGA +I + D++SF W
Sbjct: 53 DGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDITDQESFNNVKQW 102
>gi|432911398|ref|XP_004078660.1| PREDICTED: ras-related protein Rab-12-like [Oryzias latipes]
Length = 242
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/144 (34%), Positives = 78/144 (54%), Gaps = 2/144 (1%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
D+F A + V K E G+++RL +WDTAGQE F++IT AYYRGA+ V+ +
Sbjct: 65 DTFCEACKSTVGVDFKIKTVELRGKKIRLQIWDTAGQERFNSITSAYYRGAKGIVLVYDI 124
Query: 108 IDRDSFEAAHSW-KMKVENECGEIPTVLVQNKIDLLDQSVVAPEEAD-LLSRALGCRLMR 165
+++FE W KM + E +LV NK+D +++ ++ + SR G R
Sbjct: 125 TKQETFEDLPKWMKMIDKYASEEAELLLVGNKLDCETDRIISRQQGERFASRISGMRFCE 184
Query: 166 TSVKEDINVNSIFRYLTTKCLSEL 189
S K++ NV+ IF L LS++
Sbjct: 185 ASAKDNFNVDEIFLKLVDDILSKM 208
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 45/71 (63%), Gaps = 6/71 (8%)
Query: 8 GEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVSIKRTIK 67
G+++RL +WDTAGQE F++IT AYYRGA+ V+ + +++FE W MK+ I
Sbjct: 88 GKKIRLQIWDTAGQERFNSITSAYYRGAKGIVLVYDITKQETFEDLPKW-MKM-----ID 141
Query: 68 ECEGEEVRLML 78
+ EE L+L
Sbjct: 142 KYASEEAELLL 152
>gi|168029477|ref|XP_001767252.1| Rab1/RabD-family small GTPase [Physcomitrella patens subsp. patens]
gi|162681507|gb|EDQ67933.1| Rab1/RabD-family small GTPase [Physcomitrella patens subsp. patens]
Length = 204
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 78/167 (46%), Gaps = 10/167 (5%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
DS+ ++ + V K E +G+ ++L +WDTAGQE F IT +YYRGA ++ +
Sbjct: 31 DSYLESYISTIGVDFKIRTVELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDV 90
Query: 108 IDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
D++SF W +++ E + +LV NK DL + VV E A + +G + T
Sbjct: 91 TDQESFNNVKQWLNEIDRYASENVNKLLVGNKSDLASKKVVDYETAKAFADEIGIPFLET 150
Query: 167 SVKEDINVNSIF---------RYLTTKCLSELRQQEEEYSINGNGLP 204
S K NV F R + LS + ++ G +P
Sbjct: 151 SAKNATNVEQAFMTMAAEIKNRMASQPALSSTSKPNNVTNLRGQAIP 197
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 32/50 (64%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
+G+ ++L +WDTAGQE F IT +YYRGA ++ + D++SF W
Sbjct: 53 DGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQW 102
>gi|303734|dbj|BAA02118.1| GTP-binding protein [Pisum sativum]
gi|452359|emb|CAA82707.1| guanine nucleotide regulatory protein [Vicia faba]
gi|738942|prf||2001457K GTP-binding protein
gi|1098293|prf||2115367A small GTP-binding protein
Length = 202
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 74/159 (46%), Gaps = 6/159 (3%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
DS+ ++ + V K E +G+ ++L +WDTAGQE F IT +YYRGA +I +
Sbjct: 31 DSYIDSYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDV 90
Query: 108 IDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
D +SF W +++ + + +LV NK DL + V E A + +G M T
Sbjct: 91 TDEESFNNVKQWLSEIDRYASDNVNKLLVGNKCDLTENRAVPYETAKAFADEIGIPFMET 150
Query: 167 SVKEDINVNSIFRYLTTKCLSELRQQEEEYSINGNGLPP 205
S K+ NV F + + + Q N PP
Sbjct: 151 SAKDSTNVEQAFMAMASSIKERMASQP-----TNNARPP 184
>gi|327287404|ref|XP_003228419.1| PREDICTED: ras-related protein Rab-1A-like [Anolis carolinensis]
Length = 212
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 66/132 (50%), Gaps = 1/132 (0%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
D++ ++ + V K E EG ++L +WDTAGQE F IT +YYRGA +I +
Sbjct: 34 DTYTDSYISTIGVDFKIRTIELEGRTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDV 93
Query: 108 IDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
D+DSF H W ++ E + ++V NK DL + V A + +LG + T
Sbjct: 94 TDQDSFNNMHLWMEEINRYASENVNKLIVGNKSDLTSKKAVDYTTAKEYADSLGVPFLET 153
Query: 167 SVKEDINVNSIF 178
S K NV F
Sbjct: 154 SAKNATNVEQAF 165
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 32/50 (64%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
EG ++L +WDTAGQE F IT +YYRGA +I + D+DSF H W
Sbjct: 56 EGRTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQDSFNNMHLW 105
>gi|330799096|ref|XP_003287584.1| Rab GTPase [Dictyostelium purpureum]
gi|325082448|gb|EGC35930.1| Rab GTPase [Dictyostelium purpureum]
Length = 211
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 71/146 (48%), Gaps = 4/146 (2%)
Query: 34 GAQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKA 93
G ++ FS DSF + + + K E EG+ ++L +WDTAGQE F IT A
Sbjct: 30 GKSCLLLRFS---EDSFTPSFITTIGIDFKIRTIELEGKRIKLQIWDTAGQERFRTITTA 86
Query: 94 YYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEA 152
YYRGA ++ + D SF +W +E + + +L+ NK D+ ++ VV
Sbjct: 87 YYRGAMGILLVYDVTDEKSFGNIRNWIRNIEQHATDSVNKMLIGNKCDMAEKKVVDSARG 146
Query: 153 DLLSRALGCRLMRTSVKEDINVNSIF 178
L+ G + + TS K INV F
Sbjct: 147 KSLADEYGIKFLETSAKNSINVEEAF 172
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 31/50 (62%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
EG+ ++L +WDTAGQE F IT AYYRGA ++ + D SF +W
Sbjct: 63 EGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDEKSFGNIRNW 112
>gi|417396973|gb|JAA45520.1| Putative rab subfamily protein of small gtpase [Desmodus rotundus]
Length = 200
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 80/160 (50%), Gaps = 3/160 (1%)
Query: 35 AQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAY 94
+ CV+ F D D+F + + K E +G++++L +WDTAGQE F IT +Y
Sbjct: 21 GKTCVL-FRFSD-DAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQERFHTITTSY 78
Query: 95 YRGAQACVITFSTIDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEAD 153
YRGA ++ + + SFE W ++ E + +L+ NK D+ D+ VV + +
Sbjct: 79 YRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKCDMDDKRVVPKGKGE 138
Query: 154 LLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSELRQQE 193
+++ G R TS K +IN+ F L L + +E
Sbjct: 139 QIAKEHGIRFFETSAKANINIEKAFLTLAEDILRKTPVKE 178
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 40/72 (55%), Gaps = 6/72 (8%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVSIKRTI 66
+G++++L +WDTAGQE F IT +YYRGA ++ + + SFE W R I
Sbjct: 54 QGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKW------LRNI 107
Query: 67 KECEGEEVRLML 78
E E+V ML
Sbjct: 108 DEHANEDVERML 119
>gi|7498104|pir||T33855 hypothetical protein D1037.4 - Caenorhabditis elegans
Length = 224
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 79/147 (53%), Gaps = 1/147 (0%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
DSF + + + K E +G++++L +WDTAGQE F IT AYYRGA ++ +
Sbjct: 31 DSFNNSFISTIGIDFKIRTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIILVYDI 90
Query: 108 IDRDSFEAAHSWKMKV-ENECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
+ SFE +W + E+ ++ +++ NK D+ ++ V+ + + L+ G + + T
Sbjct: 91 TNERSFENIKNWIRNIEEHAASDVERMIIGNKCDIEERREVSRDRGEQLAIEYGTKFLET 150
Query: 167 SVKEDINVNSIFRYLTTKCLSELRQQE 193
S K ++N++ F L S++ Q E
Sbjct: 151 SAKANLNIDEAFFTLARDIKSKMEQNE 177
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 62/126 (49%), Gaps = 12/126 (9%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV------ 60
+G++++L +WDTAGQE F IT AYYRGA ++ + + SFE +W +
Sbjct: 53 DGKKIKLQIWDTAGQERFRTITTAYYRGAMGIILVYDITNERSFENIKNWIRNIEEHAAS 112
Query: 61 SIKRTI--KECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHS 118
++R I +C+ EE R + D Q + TK A+A + ID F A
Sbjct: 113 DVERMIIGNKCDIEERREVSRDRGEQLAIEYGTKFLETSAKANL----NIDEAFFTLARD 168
Query: 119 WKMKVE 124
K K+E
Sbjct: 169 IKSKME 174
>gi|225711854|gb|ACO11773.1| Ras-related protein Rab-8A [Lepeophtheirus salmonis]
Length = 212
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 86/165 (52%), Gaps = 5/165 (3%)
Query: 35 AQACVI-TFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKA 93
+ CV+ FS D+F + + + K E +G++++L +WDTAGQE F IT A
Sbjct: 20 GKTCVLFRFS---EDAFNSTFISTIGIDFKIRTIELDGKKIKLQIWDTAGQERFRTITTA 76
Query: 94 YYRGAQACVITFSTIDRDSFEAAHSWKMKV-ENECGEIPTVLVQNKIDLLDQSVVAPEEA 152
YYRGA ++ + + SF+ +W + E+ ++ +++ NK D+ D+ V E+
Sbjct: 77 YYRGAMGIMLVYDITNDKSFDNIKNWIRNIEEHASADVEKMILGNKCDINDRRKVTKEKG 136
Query: 153 DLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSELRQQEEEYS 197
+ L+ G + M TS K INV F L +++ ++ +E S
Sbjct: 137 EDLAIEYGIKFMETSAKSSINVEEAFFTLARDIKAKMEKRLQEAS 181
>gi|234746|gb|AAB19681.1| RAS-related protein MEL [Homo sapiens]
Length = 206
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 72/132 (54%), Gaps = 1/132 (0%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
D+F + + + K E +G+ ++L +WDTAGQE F IT AYYRGA ++ +
Sbjct: 31 DAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDI 90
Query: 108 IDRDSFEAAHSWKMKV-ENECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
+ SF+ +W + E+ ++ +++ NK D+ D+ V+ E + L+ G + M T
Sbjct: 91 TNEKSFDNIRNWIRNIEEHASADVEKMILGNKCDVNDKRQVSKERGEKLALDYGIKFMET 150
Query: 167 SVKEDINVNSIF 178
S K +INV + F
Sbjct: 151 SAKANINVENAF 162
>gi|7643790|gb|AAF65510.1| small GTP-binding protein [Capsicum annuum]
Length = 203
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 77/159 (48%), Gaps = 5/159 (3%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
DS+ ++ + V K E +G+ ++L +WDTAGQE F IT +YYRGA +I +
Sbjct: 31 DSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDI 90
Query: 108 IDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
D++SF W +++ E + +LV NK DL D V+ + A + +G M
Sbjct: 91 TDQESFNNVKQWLSEIDRYASENVNKLLVGNKSDLNDNRAVSYDTAKAFADEIGIPFMEA 150
Query: 167 SVKEDINVNSIFRYLTTKCLSELRQQEEEYSINGNGLPP 205
S K NV F + +E++ + + N PP
Sbjct: 151 SAKSATNVEQAFMAMA----AEIKNRMATQPASNNAKPP 185
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 32/50 (64%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
+G+ ++L +WDTAGQE F IT +YYRGA +I + D++SF W
Sbjct: 53 DGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDITDQESFNNVKQW 102
>gi|340055116|emb|CCC49427.1| putative small GTP-binding protein Rab1 [Trypanosoma vivax Y486]
Length = 208
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 75/159 (47%), Gaps = 1/159 (0%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
DS+ ++ + V K EG+ ++L +WDTAGQE F IT +YYRGA +I +
Sbjct: 31 DSYTESYISTIGVDFKIRTLNLEGKVIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDA 90
Query: 108 IDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
D +SF +W +++ E + +LV NK DL+ + V + A + +LG + T
Sbjct: 91 TDMESFNNVKTWLSEIDKFASENVNKLLVGNKCDLVTKKAVDTQMAKEFADSLGIPFLET 150
Query: 167 SVKEDINVNSIFRYLTTKCLSELRQQEEEYSINGNGLPP 205
S KE NV F + T + Q G P
Sbjct: 151 SAKEASNVEEAFVRMATDIKKRVAAQGANSGSGGPNSKP 189
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 32/50 (64%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
EG+ ++L +WDTAGQE F IT +YYRGA +I + D +SF +W
Sbjct: 53 EGKVIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDATDMESFNNVKTW 102
>gi|301610616|ref|XP_002934841.1| PREDICTED: ras-related protein Rab-8A [Xenopus (Silurana)
tropicalis]
Length = 207
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 86/156 (55%), Gaps = 3/156 (1%)
Query: 48 DSFEAAHSWKMKVSIK-RTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFS 106
D+F + + + K RTI E +G+ ++L +WDTAGQE F IT AYYRGA ++ +
Sbjct: 31 DAFNSTFISTIGIDFKIRTI-ELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYD 89
Query: 107 TIDRDSFEAAHSWKMKV-ENECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMR 165
+ SF+ +W + E+ ++ +++ NK D+ ++ V+ E+ + L+ G + M
Sbjct: 90 ITNEKSFDNIKNWIRNIEEHASSDVEKMILGNKCDVNEKRQVSKEKGEKLALEYGIKFME 149
Query: 166 TSVKEDINVNSIFRYLTTKCLSELRQQEEEYSINGN 201
TS K +INV + F L +++ ++ E S G+
Sbjct: 150 TSAKANINVENAFFTLARDIKAKMDKRMEGNSPQGS 185
>gi|403366301|gb|EJY82950.1| Small GTP-binding protein domain-containing protein [Oxytricha
trifallax]
Length = 174
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 71/143 (49%), Gaps = 1/143 (0%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
D F + + V K E G +V+L +WDTAGQE F +IT AYYRGA +I +
Sbjct: 32 DEFREQYLATIGVDYKIKALEVNGRQVKLQIWDTAGQERFQSITTAYYRGASGMMIVYDV 91
Query: 108 IDRDSFEAAHS-WKMKVENECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
RDSFE A + E ++ +V NK DL ++ EE + +G T
Sbjct: 92 TSRDSFEKAKDIFNKSREYTTQDVVYAVVGNKSDLNGVREISFEEGMSFANEIGAYFQET 151
Query: 167 SVKEDINVNSIFRYLTTKCLSEL 189
S KE+ ++ +F L +C+ +L
Sbjct: 152 SAKENYSIEIVFHDLALRCVQKL 174
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 32/48 (66%)
Query: 6 CEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAA 53
G +V+L +WDTAGQE F +IT AYYRGA +I + RDSFE A
Sbjct: 53 VNGRQVKLQIWDTAGQERFQSITTAYYRGASGMMIVYDVTSRDSFEKA 100
>gi|358060564|dbj|GAA93714.1| hypothetical protein E5Q_00360 [Mixia osmundae IAM 14324]
Length = 252
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/152 (32%), Positives = 74/152 (48%), Gaps = 1/152 (0%)
Query: 49 SFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTI 108
SF+A + + + E VRL LWDTAGQE F ++ +Y R + V+ +
Sbjct: 80 SFDATYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDIT 139
Query: 109 DRDSFEAAHSWKMKVENECG-EIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTS 167
+R SF + + W V E G ++ VLV NK DL D+ V EEA+ ++ LG + TS
Sbjct: 140 NRSSFASTNKWIDDVRAERGSDVIIVLVGNKTDLNDKRQVTTEEAEKRAKDLGVMFIETS 199
Query: 168 VKEDINVNSIFRYLTTKCLSELRQQEEEYSIN 199
K NV ++FR + R E+ N
Sbjct: 200 AKAGHNVKTLFRKIAQALPGMDRDSEQAAGTN 231
Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 63/138 (45%), Gaps = 28/138 (20%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW---------- 56
E VRL LWDTAGQE F ++ +Y R + V+ + +R SF + + W
Sbjct: 101 EDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDITNRSSFASTNKWIDDVRAERGS 160
Query: 57 ---------KMKVSIKRTIKECEGE----EVRLMLWDTAGQEEFDAITKAYYRGAQACVI 103
K ++ KR + E E ++ +M +T+ + + T + + AQA
Sbjct: 161 DVIIVLVGNKTDLNDKRQVTTEEAEKRAKDLGVMFIETSAKAGHNVKT-LFRKIAQA--- 216
Query: 104 TFSTIDRDSFEAAHSWKM 121
+DRDS +AA + +M
Sbjct: 217 -LPGMDRDSEQAAGTNQM 233
>gi|432607|gb|AAB28535.1| ras-related GTP binding protein possessing GTPase activity [Oryza
sativa]
Length = 202
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 75/146 (51%), Gaps = 1/146 (0%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
DS+ ++ + V K E +G+ ++L +WDTAGQE F IT +YYRGA ++ +
Sbjct: 31 DSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDV 90
Query: 108 IDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
D++SF W +++ E + +LV NK DL + VV+ E L+ +G + T
Sbjct: 91 TDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLAENRVVSYEAGKALADEIGIPFLET 150
Query: 167 SVKEDINVNSIFRYLTTKCLSELRQQ 192
S K+ NV F + + + + Q
Sbjct: 151 SAKDATNVEKAFMTMAGEIKNRMASQ 176
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 32/50 (64%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
+G+ ++L +WDTAGQE F IT +YYRGA ++ + D++SF W
Sbjct: 53 DGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQW 102
>gi|2118463|pir||I78851 GTP-binding protein MEL - mouse
gi|234748|gb|AAB19682.1| RAS-related [Mus sp.]
Length = 206
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 72/132 (54%), Gaps = 1/132 (0%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
D+F + + + K E +G+ ++L +WDTAGQE F IT AYYRGA ++ +
Sbjct: 31 DAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDI 90
Query: 108 IDRDSFEAAHSWKMKV-ENECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
+ SF+ +W + E+ ++ +++ NK D+ D+ V+ E + L+ G + M T
Sbjct: 91 TNEKSFDNIRNWIRNIEEHASADVEKMILGNKCDVNDKRQVSKERGEKLALDYGIKFMET 150
Query: 167 SVKEDINVNSIF 178
S K +INV + F
Sbjct: 151 SAKANINVENAF 162
>gi|291402521|ref|XP_002717602.1| PREDICTED: RAB7, member RAS oncogene family-like 1 isoform 1
[Oryctolagus cuniculus]
Length = 204
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 85/162 (52%), Gaps = 8/162 (4%)
Query: 47 RDSFEAAHSWKMKVSIK-RTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITF 105
+DSF + + V + ++ + E VRL LWD AGQE F ++T+ YYR A ACVI F
Sbjct: 29 QDSFSKHYKSTVGVDFALKVLQWSDSEVVRLQLWDIAGQERFTSMTRLYYRDASACVIMF 88
Query: 106 STIDRDSFEAAHSWKMKVENEC----GE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALG 160
+ +F + WK ++++ GE +P +L+ NK D L V+ ++ D S+ G
Sbjct: 89 DVTNATTFSNSQRWKQDLDSKLTLPNGEPVPCLLLANKCD-LSPWAVSRDQIDRFSKENG 147
Query: 161 -CRLMRTSVKEDINVNSIFRYLTTKCLSELRQQEEEYSINGN 201
TSVKE+ N+N R L K +S +++ S GN
Sbjct: 148 FTGWTETSVKENKNINEAMRVLIEKMMSNSKEEAVSLSTQGN 189
Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVSIKRTI 66
+ E VRL LWD AGQE F ++T+ YYR A ACVI F + +F + WK + K T+
Sbjct: 53 DSEVVRLQLWDIAGQERFTSMTRLYYRDASACVIMFDVTNATTFSNSQRWKQDLDSKLTL 112
Query: 67 KECEGEEVRLML 78
GE V +L
Sbjct: 113 P--NGEPVPCLL 122
>gi|194374445|dbj|BAG57118.1| unnamed protein product [Homo sapiens]
Length = 207
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 83/160 (51%), Gaps = 7/160 (4%)
Query: 35 AQACVI-TFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKA 93
+ CV+ FS D+F + + + K E +G+ ++L +WDTAGQE F IT A
Sbjct: 20 GKTCVLFRFS---EDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTA 76
Query: 94 YYRGAQACVITFSTIDRDSFEAAHSWKMKV-ENECGEIPTVLVQNKIDLLDQSVVAPEEA 152
YYRGA ++ + + SF+ +W + E+ ++ +++ NK D+ D+ V+ E
Sbjct: 77 YYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCDVNDKRQVSKERG 136
Query: 153 DLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSELRQQ 192
+ L+ G + M TS K +INV + RY + RQQ
Sbjct: 137 EKLALDYGIKFMETSAKANINVEN--RYQSKNGQKIGRQQ 174
>gi|443895663|dbj|GAC73008.1| GTPase Rab18 [Pseudozyma antarctica T-34]
Length = 233
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 73/144 (50%), Gaps = 4/144 (2%)
Query: 48 DSFEAAHSWKMKVSIKRTIK--ECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITF 105
D F + + + IK E G+ +L +WDTAGQE F +T +YYRGAQ +I +
Sbjct: 32 DEFLSPEETTATIGVDYRIKGIEVGGKRFKLSIWDTAGQERFRTLTSSYYRGAQGVIIAY 91
Query: 106 STIDRDSFEAAHSWKMKVE--NECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRL 163
RD+F+A +W ++E ++ ++V NK+D VV +E + +GC
Sbjct: 92 DVTQRDTFDALPTWFNELETFTTSEDVVKIIVGNKVDKEFSRVVTTDEGQAFADKMGCLF 151
Query: 164 MRTSVKEDINVNSIFRYLTTKCLS 187
+ S K+ + VN F L + +S
Sbjct: 152 VECSAKKGVGVNGAFDELVNRIIS 175
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 33/49 (67%)
Query: 8 GEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
G+ +L +WDTAGQE F +T +YYRGAQ +I + RD+F+A +W
Sbjct: 57 GKRFKLSIWDTAGQERFRTLTSSYYRGAQGVIIAYDVTQRDTFDALPTW 105
>gi|393248191|gb|EJD55698.1| GTP-binding protein, SEC4 [Auricularia delicata TFB-10046 SS5]
Length = 209
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 70/133 (52%), Gaps = 2/133 (1%)
Query: 64 RTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 123
RTI E +G+ ++L +WDTAGQE F IT AYYRGA ++ + D SF +W +
Sbjct: 49 RTI-ELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRTWHANI 107
Query: 124 ENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLT 182
E E + +L+ NK D ++ VV+ ++ L++ LG R + TS K + V F L
Sbjct: 108 EQHASEGVNKILIGNKSDWTEKKVVSEDQGRALAQELGIRFLETSAKVNEGVEEAFFTLA 167
Query: 183 TKCLSELRQQEEE 195
+ L + E
Sbjct: 168 RDIKTRLIDSQPE 180
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 32/54 (59%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 60
+G+ ++L +WDTAGQE F IT AYYRGA ++ + D SF +W +
Sbjct: 54 DGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRTWHANI 107
>gi|116779261|gb|ABK21206.1| unknown [Picea sitchensis]
gi|224284661|gb|ACN40063.1| unknown [Picea sitchensis]
Length = 202
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 74/146 (50%), Gaps = 1/146 (0%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
DS+ ++ + V K E +G+ ++L +WDTAGQE F IT +YYRGA ++ +
Sbjct: 31 DSYLESYISTIGVDFKIRTVELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDV 90
Query: 108 IDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
D++SF W +++ E + +LV NK DL + VV + A + +G + T
Sbjct: 91 TDQESFNNVKQWLNEIDRYASENVNKLLVGNKNDLTAKKVVDYQTAKAFADEIGIPFLET 150
Query: 167 SVKEDINVNSIFRYLTTKCLSELRQQ 192
S K INV F + + + + Q
Sbjct: 151 SAKNAINVEDAFMTMAAEIKNRMASQ 176
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 32/50 (64%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
+G+ ++L +WDTAGQE F IT +YYRGA ++ + D++SF W
Sbjct: 53 DGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQW 102
>gi|45360657|ref|NP_989002.1| uncharacterized protein LOC394598 [Xenopus (Silurana) tropicalis]
gi|38174213|gb|AAH61274.1| hypothetical protein MGC75714 [Xenopus (Silurana) tropicalis]
Length = 201
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 73/153 (47%), Gaps = 3/153 (1%)
Query: 34 GAQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKA 93
G + ++ FS +SF ++ + V K +GE V+L +WDTAGQE F IT
Sbjct: 21 GKSSLLLRFSD---NSFSGSYITTIGVDFKIRTLVLDGERVKLQIWDTAGQERFRTITST 77
Query: 94 YYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGEIPTVLVQNKIDLLDQSVVAPEEAD 153
YYR ++ + +SF W ++ C + TVLV NK D + V +A
Sbjct: 78 YYRNTHGVIVVYDVTSPESFVNVKRWLHEITQNCDSVCTVLVGNKDDDPSRKRVEAADAK 137
Query: 154 LLSRALGCRLMRTSVKEDINVNSIFRYLTTKCL 186
+ +G R+ TS KE+ NV +F +T L
Sbjct: 138 RFADQMGVRMFETSAKENRNVEEMFLSVTRMVL 170
Score = 53.1 bits (126), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 28/52 (53%)
Query: 5 ICEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
+ +GE V+L +WDTAGQE F IT YYR ++ + +SF W
Sbjct: 52 VLDGERVKLQIWDTAGQERFRTITSTYYRNTHGVIVVYDVTSPESFVNVKRW 103
>gi|157125296|ref|XP_001654277.1| ras-related protein Rab-8A, putative [Aedes aegypti]
gi|157125298|ref|XP_001654278.1| ras-related protein Rab-8A, putative [Aedes aegypti]
gi|157125300|ref|XP_001654279.1| ras-related protein Rab-8A, putative [Aedes aegypti]
gi|108873652|gb|EAT37877.1| AAEL010170-PA [Aedes aegypti]
gi|108873654|gb|EAT37879.1| AAEL010170-PC [Aedes aegypti]
gi|403183099|gb|EJY57852.1| AAEL010170-PB [Aedes aegypti]
Length = 208
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 78/159 (49%), Gaps = 3/159 (1%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
D+F + + K E +G++++L +WDTAGQE F IT AYYRGA ++ +
Sbjct: 31 DAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDI 90
Query: 108 IDRDSFEAAHSWKMKV-ENECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
SFE +W + EN ++ +L+ NK +L ++ V + + L+ G + M T
Sbjct: 91 TQEKSFENIKNWIRNIEENASADVEKMLLGNKCELNEKRQVTRDRGEQLAVEYGIKFMET 150
Query: 167 SVKEDINVNSIFRYLT--TKCLSELRQQEEEYSINGNGL 203
S K INV+ F L KC E R + G+ L
Sbjct: 151 SAKASINVDEAFFTLARDIKCKMEKRMEANNPPKGGHQL 189
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 40/72 (55%), Gaps = 6/72 (8%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVSIKRTI 66
+G++++L +WDTAGQE F IT AYYRGA ++ + SFE +W R I
Sbjct: 53 DGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITQEKSFENIKNW------IRNI 106
Query: 67 KECEGEEVRLML 78
+E +V ML
Sbjct: 107 EENASADVEKML 118
>gi|340380157|ref|XP_003388590.1| PREDICTED: ras-related protein Rab-8A-like [Amphimedon
queenslandica]
gi|340386342|ref|XP_003391667.1| PREDICTED: ras-related protein Rab-8A-like [Amphimedon
queenslandica]
Length = 205
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 76/149 (51%), Gaps = 4/149 (2%)
Query: 34 GAQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKA 93
G ++ FS D+F + + + K + EG++++L +WDTAGQE F IT A
Sbjct: 20 GKTCILVRFS---EDAFNSTFISTIGIDFKIRTVDIEGKKIKLQIWDTAGQERFRTITTA 76
Query: 94 YYRGAQACVITFSTIDRDSFEAAHSWKMKV-ENECGEIPTVLVQNKIDLLDQSVVAPEEA 152
YYRGA ++ + + SF+ +W + EN ++ +++ NK DL + VV+ E
Sbjct: 77 YYRGAMGIMLVYDVTNEKSFDNIRNWIRNIEENAAADVEKMILGNKCDLEESRVVSRERG 136
Query: 153 DLLSRALGCRLMRTSVKEDINVNSIFRYL 181
LL+ + M TS K NV + F L
Sbjct: 137 QLLAEEHQVKFMETSAKSGQNVETAFLNL 165
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 33/50 (66%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
EG++++L +WDTAGQE F IT AYYRGA ++ + + SF+ +W
Sbjct: 53 EGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDVTNEKSFDNIRNW 102
>gi|212275502|ref|NP_001130744.1| Ras protein RIC1 [Zea mays]
gi|194690000|gb|ACF79084.1| unknown [Zea mays]
gi|195605598|gb|ACG24629.1| ras-related protein RIC1 [Zea mays]
gi|195606872|gb|ACG25266.1| ras-related protein RIC1 [Zea mays]
gi|223942789|gb|ACN25478.1| unknown [Zea mays]
gi|413950363|gb|AFW83012.1| Ras protein RIC1 [Zea mays]
Length = 203
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 75/146 (51%), Gaps = 1/146 (0%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
DS+ ++ + V K E +G+ ++L +WDTAGQE F IT +YYRGA ++ +
Sbjct: 31 DSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDV 90
Query: 108 IDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
D++SF W +++ E + +LV NK DL + VV+ E L+ +G + T
Sbjct: 91 TDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLAENRVVSYEAGKALADDIGIPFLET 150
Query: 167 SVKEDINVNSIFRYLTTKCLSELRQQ 192
S K+ NV F + + + + Q
Sbjct: 151 SAKDATNVEKAFMTMAGEIKNRMASQ 176
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 32/50 (64%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
+G+ ++L +WDTAGQE F IT +YYRGA ++ + D++SF W
Sbjct: 53 DGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQW 102
>gi|170100328|ref|XP_001881382.1| GTP-binding protein, SEC4 [Laccaria bicolor S238N-H82]
gi|164644061|gb|EDR08312.1| GTP-binding protein, SEC4 [Laccaria bicolor S238N-H82]
Length = 205
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/119 (38%), Positives = 63/119 (52%), Gaps = 2/119 (1%)
Query: 64 RTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 123
RTI E +G+ ++L +WDTAGQE F IT AYYRGA ++ + D SF +W +
Sbjct: 49 RTI-ELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRTWHNNI 107
Query: 124 ENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYL 181
E E + +L+ NK D D+ V E+ L+ LG R M TS K + V F L
Sbjct: 108 EQHASEGVNKILIGNKSDWTDKRAVTEEQGRELANELGIRFMETSAKVNEGVEEAFFTL 166
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 32/54 (59%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 60
+G+ ++L +WDTAGQE F IT AYYRGA ++ + D SF +W +
Sbjct: 54 DGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRTWHNNI 107
>gi|1546067|gb|AAB08102.1| GTPase SUrab10p, partial [Strongylocentrotus purpuratus]
Length = 178
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 75/147 (51%), Gaps = 1/147 (0%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
D+F + + K E G++++L +WDTAGQE F IT +YYRGA ++ +
Sbjct: 9 DTFSTTFISTIGIDFKIKTVELNGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDI 68
Query: 108 IDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
+ +F+ W ++ E + +L+ NK D+ D+ ++ + + +++ G + M T
Sbjct: 69 MQEKTFDNIAKWLRNIQEHANEDVEKMLLGNKCDMDDKRMINKDRGETIAKENGIKFMET 128
Query: 167 SVKEDINVNSIFRYLTTKCLSELRQQE 193
S K +INV F L L + Q++
Sbjct: 129 SAKANINVEQAFMTLAADILKKYPQRD 155
>gi|22651417|gb|AAL12244.1| Rab39 [Homo sapiens]
Length = 213
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/114 (40%), Positives = 67/114 (58%), Gaps = 2/114 (1%)
Query: 71 GEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW--KMKVENECG 128
G+ ++L +WDTAGQE F +IT+AYYR + ++ F +R SF+ H W + KV +
Sbjct: 55 GKTIKLQIWDTAGQERFRSITRAYYRNSVGGLLLFDITNRRSFQNVHEWLEETKVHVQPY 114
Query: 129 EIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLT 182
+I VLV +K DL Q V EA+ L+ A G + + TS ++ INV F LT
Sbjct: 115 QIVFVLVGHKCDLDTQRQVTRHEAEKLAAAYGMKYIETSARDAINVEKAFTDLT 168
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 33/49 (67%)
Query: 8 GEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
G+ ++L +WDTAGQE F +IT+AYYR + ++ F +R SF+ H W
Sbjct: 55 GKTIKLQIWDTAGQERFRSITRAYYRNSVGGLLLFDITNRRSFQNVHEW 103
>gi|145506142|ref|XP_001439037.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74831419|emb|CAI39301.1| rab_C53 [Paramecium tetraurelia]
gi|124406210|emb|CAK71640.1| unnamed protein product [Paramecium tetraurelia]
Length = 222
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 77/155 (49%), Gaps = 6/155 (3%)
Query: 50 FEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTID 109
F A+ M V + + G ++L +WDTAGQE F ++ ++YYR A C++ F D
Sbjct: 32 FRNAYQVTMGVEFGTNLIKSNGHVIKLYIWDTAGQESFSSMIRSYYRNAIGCILVFDLTD 91
Query: 110 RDSFEAAHSWKMKVENECG-EIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSV 168
R SFE+ W +V + G +I ++V NK DL + V EA L++ + + S
Sbjct: 92 RKSFESLVKWYNEVLSCTGNDIQIIIVGNKSDLQNNREVQEREALDLAKRFNGKYVEASA 151
Query: 169 KEDINVNSIFRYLTTKCLSELRQ-----QEEEYSI 198
NV IF LT + L E++ Q E Y I
Sbjct: 152 LTGSNVTQIFETLTEQILQEIQSGKIDPQNEIYGI 186
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 42/71 (59%), Gaps = 6/71 (8%)
Query: 8 GEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVSIKRTIK 67
G ++L +WDTAGQE F ++ ++YYR A C++ F DR SFE+ W +V
Sbjct: 53 GHVIKLYIWDTAGQESFSSMIRSYYRNAIGCILVFDLTDRKSFESLVKWYNEVL------ 106
Query: 68 ECEGEEVRLML 78
C G ++++++
Sbjct: 107 SCTGNDIQIII 117
>gi|406699720|gb|EKD02919.1| rab/GTPase [Trichosporon asahii var. asahii CBS 8904]
Length = 328
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 75/151 (49%), Gaps = 6/151 (3%)
Query: 55 SWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFE 114
S+ + I TI E +G+ ++L +WDTAGQE F IT AYYRGA +I + D SF
Sbjct: 158 SFITTIGIDLTI-ELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILIVYDVTDEKSFN 216
Query: 115 AAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDIN 173
+W ++E + +L+ NK D ++ VV E+ L+ G R + TS K +
Sbjct: 217 NVRTWHQQIEQHASAGVNKILIGNKCDWDEKRVVTLEQGRALADEFGLRFLETSAKANEG 276
Query: 174 VNSIF----RYLTTKCLSELRQQEEEYSING 200
V F R + T+ + Q E+ + G
Sbjct: 277 VEEAFFTLARDIKTRLIDSQPQTEQPVKLGG 307
Score = 59.7 bits (143), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 33/54 (61%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 60
+G+ ++L +WDTAGQE F IT AYYRGA +I + D SF +W ++
Sbjct: 172 DGKRIKLQIWDTAGQERFRTITTAYYRGAMGILIVYDVTDEKSFNNVRTWHQQI 225
>gi|345322815|ref|XP_003430635.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein Rab-10-like
[Ornithorhynchus anatinus]
Length = 200
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 80/160 (50%), Gaps = 3/160 (1%)
Query: 35 AQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAY 94
+ CV+ F D D+F + + K E +G++++L +WDTAGQE F IT +Y
Sbjct: 21 GKTCVL-FRFSD-DAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQERFHTITTSY 78
Query: 95 YRGAQACVITFSTIDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEAD 153
YRGA ++ + + SFE W ++ E + +L+ NK D+ D+ VV + +
Sbjct: 79 YRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKCDMEDKRVVLKTKGE 138
Query: 154 LLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSELRQQE 193
+++ G R TS K +IN+ F L L + +E
Sbjct: 139 QIAKEHGIRFFETSAKANINIEKAFLTLAEDILRKTPVKE 178
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 40/72 (55%), Gaps = 6/72 (8%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVSIKRTI 66
+G++++L +WDTAGQE F IT +YYRGA ++ + + SFE W R I
Sbjct: 54 QGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKW------LRNI 107
Query: 67 KECEGEEVRLML 78
E E+V ML
Sbjct: 108 DEHANEDVERML 119
>gi|154422723|ref|XP_001584373.1| hypothetical protein [Trichomonas vaginalis G3]
gi|62736316|gb|AAX97487.1| small Rab GTPase RabX10 [Trichomonas vaginalis]
gi|121918620|gb|EAY23387.1| hypothetical protein TVAG_070500 [Trichomonas vaginalis G3]
Length = 196
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 71/141 (50%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
+SFE + V K + +G+ V+L +WD+AGQE F IT +YYR +I +
Sbjct: 30 NSFEENFLSTIGVDFKVREIDVDGKRVKLQIWDSAGQERFRNITTSYYRNCGGIIIVYDI 89
Query: 108 IDRDSFEAAHSWKMKVENECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTS 167
D+F W V +P +LV NK DL D+ V +EA L+ +G L+ TS
Sbjct: 90 TRHDTFTKVTEWIEDVRKITSNVPLLLVGNKADLEDKRAVTEQEAKELANRMGLVLLETS 149
Query: 168 VKEDINVNSIFRYLTTKCLSE 188
K +N+ F+ ++ + + E
Sbjct: 150 AKTALNIEDAFKQISRQLIKE 170
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 28/50 (56%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
+G+ V+L +WD+AGQE F IT +YYR +I + D+F W
Sbjct: 52 DGKRVKLQIWDSAGQERFRNITTSYYRNCGGIIIVYDITRHDTFTKVTEW 101
>gi|403413298|emb|CCL99998.1| predicted protein [Fibroporia radiculosa]
Length = 231
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 80/162 (49%), Gaps = 1/162 (0%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
D+F+ + + + E VRL LWDTAGQE + ++ +Y R ++ F
Sbjct: 40 DTFDNTYQATIGIDFLSKAMYLEDRTVRLQLWDTAGQERYRSLIPSYIRDCSVAIVVFDI 99
Query: 108 IDRDSFEAAHSWKMKVENECG-EIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
+R SF + W V +E G ++ VLV NK DL D+ V EEA+ + L M T
Sbjct: 100 TNRQSFLSTSKWIDDVRSERGSDVIIVLVGNKADLSDKRQVMLEEANTKATQLEIMFMET 159
Query: 167 SVKEDINVNSIFRYLTTKCLSELRQQEEEYSINGNGLPPYTI 208
S K NV S+F+ + + + ++ E + N + +PP T+
Sbjct: 160 SAKAGHNVKSLFKKIAMELVGMEKETEASETQNTSTIPPLTL 201
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 27/50 (54%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
E VRL LWDTAGQE + ++ +Y R ++ F +R SF + W
Sbjct: 62 EDRTVRLQLWDTAGQERYRSLIPSYIRDCSVAIVVFDITNRQSFLSTSKW 111
>gi|339898641|ref|XP_003392649.1| putative small GTP-binding protein Rab1 [Leishmania infantum JPCM5]
gi|321398437|emb|CBZ08825.1| putative small GTP-binding protein Rab1 [Leishmania infantum JPCM5]
Length = 200
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 78/161 (48%), Gaps = 3/161 (1%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
DS+ ++ + V K E + ++L +WDTAGQE F IT +YYRGA +I + T
Sbjct: 31 DSYTDSYISTIGVDFKIRTLNLESKVIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDT 90
Query: 108 IDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
D +SF +W ++E E + +LV NK DL+ + V + A + +LG + T
Sbjct: 91 TDMESFNNVKTWLSEIEKYASENVNKILVGNKCDLVTKKAVDTQMAKDFADSLGIPFLET 150
Query: 167 SVKEDINVNSIFRYLTTKCLSELRQQEEEYSINGNGL--PP 205
S K NV F + + + L E S + L PP
Sbjct: 151 SAKNSTNVEEAFIQMASGIKARLAVSGEVKSASRPNLQNPP 191
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 32/50 (64%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
E + ++L +WDTAGQE F IT +YYRGA +I + T D +SF +W
Sbjct: 53 ESKVIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDTTDMESFNNVKTW 102
>gi|403357671|gb|EJY78464.1| RAB22A, member RAS oncogene family [Oxytricha trifallax]
Length = 216
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/144 (34%), Positives = 80/144 (55%), Gaps = 7/144 (4%)
Query: 48 DSFEAAHSWKMKVSIKRTI----KECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVI 103
D F+ + + S K I E GE V+L +WDTAGQE+F ++TK YY+ A+A VI
Sbjct: 28 DKFDEQNLPTLGASFKSQIIQLPSEGAGESVKLNIWDTAGQEKFKSLTKMYYQDAEAAVI 87
Query: 104 TFSTIDRDSFEAAHSWKMKVENECG--EIPTVLVQNKIDLLDQSVVAPEEADLLSRALGC 161
+ R+SF++A +W + N +I +V NK DL D++ V EEA R++
Sbjct: 88 VYDITFRESFDSAKNWVQDLRNNANHPDILVAMVGNKCDLTDKAEVQLEEAYSFGRSIKA 147
Query: 162 RLMR-TSVKEDINVNSIFRYLTTK 184
+++ TS K+ I + +F+ + K
Sbjct: 148 DIIKETSAKDKIGLTELFQEIVQK 171
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 37/49 (75%)
Query: 8 GEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
GE V+L +WDTAGQE+F ++TK YY+ A+A VI + R+SF++A +W
Sbjct: 55 GESVKLNIWDTAGQEKFKSLTKMYYQDAEAAVIVYDITFRESFDSAKNW 103
>gi|194692552|gb|ACF80360.1| unknown [Zea mays]
gi|414591885|tpg|DAA42456.1| TPA: ras protein ARA-3 [Zea mays]
Length = 218
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 65/116 (56%), Gaps = 2/116 (1%)
Query: 64 RTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 123
RT+ E +G+ V+L +WDTAGQE F IT AYYRGA ++ + D SF+ +W +
Sbjct: 55 RTV-ELDGKRVKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFDNIRNWIRNI 113
Query: 124 ENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIF 178
E + + +LV NK+D+ + VV+ + L+ G + TS K + NV +F
Sbjct: 114 EQHASDNVNKILVGNKVDMDAKRVVSTAQGQKLADEYGIKFFETSAKTNRNVEQVF 169
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 32/51 (62%)
Query: 6 CEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
+G+ V+L +WDTAGQE F IT AYYRGA ++ + D SF+ +W
Sbjct: 59 LDGKRVKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFDNIRNW 109
>gi|157117562|ref|XP_001658827.1| ras-related protein, putative [Aedes aegypti]
gi|108875998|gb|EAT40223.1| AAEL008029-PA [Aedes aegypti]
Length = 231
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 80/154 (51%), Gaps = 5/154 (3%)
Query: 48 DSFEAAHSWKMKVSIK-RTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFS 106
+ F H + V K RTIK E ++L +WDTAGQE F IT +YYRGA ++ +
Sbjct: 54 NKFPLKHQITIGVDFKIRTIK-INDEHIKLQIWDTAGQERFRLITNSYYRGAHGVILVYD 112
Query: 107 TIDRDSFEAAHSWKMKVENEC--GEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLM 164
SF+ W +++ C GE+ +LV NK D +V P +A ++ G +
Sbjct: 113 VTSMKSFQHVKRWLKEIQVNCTTGEVCKLLVGNKNDNPQLKMVPPRDAKAVADMHGMEFI 172
Query: 165 RTSVKEDINVNSIFRYLTTKCLS-ELRQQEEEYS 197
+S KE NV +F + + L +L+++ +E++
Sbjct: 173 ESSAKECYNVEKVFTTIAKQILKQQLKEEGKEWT 206
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 33/60 (55%)
Query: 9 EEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKE 68
E ++L +WDTAGQE F IT +YYRGA ++ + SF+ W ++ + T E
Sbjct: 78 EHIKLQIWDTAGQERFRLITNSYYRGAHGVILVYDVTSMKSFQHVKRWLKEIQVNCTTGE 137
>gi|108706608|gb|ABF94403.1| Ras-related protein Rab-6A, putative, expressed [Oryza sativa
Japonica Group]
Length = 215
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 76/152 (50%), Gaps = 6/152 (3%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
D F+A + + + E VRL LWDTAGQE F ++ +Y R + VI +
Sbjct: 33 DKFDATYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDV 92
Query: 108 IDRDSFEAAHSWKMKVENE-CGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
DR SF + W +V + G++ VLV NK DL+D+ ++ +E + ++ G M T
Sbjct: 93 TDRQSFLSISKWIEEVNTQRGGDVIIVLVGNKTDLVDKRQISTDEGEAKAQEHGAMFMET 152
Query: 167 SVKEDINVNSIFRYLTT-----KCLSELRQQE 193
S K N+ +FR + + LS +Q++
Sbjct: 153 SAKAGFNIKPLFRKIAASLPGMEALSSAKQED 184
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 33/58 (56%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVSIKR 64
E VRL LWDTAGQE F ++ +Y R + VI + DR SF + W +V+ +R
Sbjct: 55 EDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDVTDRQSFLSISKWIEEVNTQR 112
>gi|56756457|gb|AAW26401.1| SJCHGC06657 protein [Schistosoma japonicum]
Length = 213
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 88/177 (49%), Gaps = 9/177 (5%)
Query: 35 AQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAY 94
++C++ T R F+ H + V + +G++V+L +WDTAGQE F +IT++Y
Sbjct: 18 GKSCLLLQFTDKR--FQPVHDLTIGVEFGARLINIDGKQVKLQIWDTAGQESFRSITRSY 75
Query: 95 YRGAQACVITFSTIDRDSFEAAHSWKMKV-ENECGEIPTVLVQNKIDLLDQSVVAPEEAD 153
YRGA ++ + RD+F +W ++ + +L+ NK DL + V EE +
Sbjct: 76 YRGAAGALLVYDITRRDTFTHLTTWLEDARQHSSSNMVIMLIGNKSDLESRRDVQKEEGE 135
Query: 154 LLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSELRQQEEEYSIN--GNG--LPPY 206
+R G M TS K NV F T KC+ + + QE +N NG L P+
Sbjct: 136 AFAREHGLVFMETSAKTAANVEDAF-INTAKCIHD-KIQEGALDVNNEANGIKLGPH 190
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 35/50 (70%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
+G++V+L +WDTAGQE F +IT++YYRGA ++ + RD+F +W
Sbjct: 51 DGKQVKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFTHLTTW 100
>gi|348578125|ref|XP_003474834.1| PREDICTED: ras-related protein Rab-7L1-like isoform 1 [Cavia
porcellus]
Length = 204
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/144 (36%), Positives = 77/144 (53%), Gaps = 7/144 (4%)
Query: 64 RTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 123
+ I+ + E VRL LWD AGQE F ++T+ YYR A ACVI F + +F + WK +
Sbjct: 47 KVIQWSDSEMVRLQLWDIAGQERFTSMTRLYYRDASACVIMFDVTNATTFSNSQRWKQDL 106
Query: 124 ENEC----GE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALG-CRLMRTSVKEDINVNSI 177
+++ GE +P +L+ NK D L V+ ++ D S+ G TSVKE+ N+N
Sbjct: 107 DSKLTLPNGEPVPCLLLANKCD-LSPWAVSRDQIDRFSKENGFTGWTETSVKENKNINEA 165
Query: 178 FRYLTTKCLSELRQQEEEYSINGN 201
R L K +S R+ S G+
Sbjct: 166 MRVLVEKMMSNSREDTMSLSTQGD 189
Score = 62.8 bits (151), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVSIKRTI 66
+ E VRL LWD AGQE F ++T+ YYR A ACVI F + +F + WK + K T+
Sbjct: 53 DSEMVRLQLWDIAGQERFTSMTRLYYRDASACVIMFDVTNATTFSNSQRWKQDLDSKLTL 112
Query: 67 KECEGEEVRLML 78
GE V +L
Sbjct: 113 P--NGEPVPCLL 122
>gi|432958931|ref|XP_004086115.1| PREDICTED: ras-related protein Rab-8B-like [Oryzias latipes]
Length = 206
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 79/157 (50%), Gaps = 2/157 (1%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
D+F + + K + +G++++L +WDTAGQE F IT AYYRGA ++ +
Sbjct: 31 DAFNTTFISTIGIDFKIRTVDLDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDI 90
Query: 108 IDRDSFEAAHSWKMKV-ENECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
+ SF+ +W + E+ ++ +++ NK D+ D+ V+ E + L+ + + T
Sbjct: 91 TNEKSFDNIRNWIRNIEEHASADVERMVLGNKCDMNDRRQVSKERGEKLAIDYSIKFLET 150
Query: 167 SVKEDINVNSIFRYLTTKCLSEL-RQQEEEYSINGNG 202
S K INV F L +S L R+ + S G G
Sbjct: 151 SAKSSINVEEAFLTLARDIMSRLNRKMHNDSSAGGGG 187
>gi|350538375|ref|NP_001233828.1| small GTP-binding protein [Solanum lycopersicum]
gi|1053065|gb|AAA80679.1| small GTP-binding protein [Solanum lycopersicum]
Length = 202
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 70/132 (53%), Gaps = 1/132 (0%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
DS+ ++ + V K E +G+ ++L +WDTAGQE F IT +YYRGA +I +
Sbjct: 31 DSYVDSYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDV 90
Query: 108 IDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
+ +SF W +++ E + +LV NK DL++ VV + L+ LG + T
Sbjct: 91 TEMESFNNVKQWLNEIDRYANESVCKLLVGNKCDLVENKVVDTQMGKALADELGIPFLET 150
Query: 167 SVKEDINVNSIF 178
S K+ INV F
Sbjct: 151 SAKDSINVEQAF 162
>gi|348538473|ref|XP_003456715.1| PREDICTED: ras-related protein Rab-1A-like isoform 1 [Oreochromis
niloticus]
Length = 203
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 79/159 (49%), Gaps = 5/159 (3%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
D++ ++ + V K E +G+ ++L +WDTAGQE F IT +YYRGA ++ +
Sbjct: 31 DTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDV 90
Query: 108 IDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
D++SF W +++ E + +LV NK DL + VV A + +LG + T
Sbjct: 91 TDQESFNNVKQWLQEIDRYASENVNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLET 150
Query: 167 SVKEDINVNSIFRYLTTKCLSELRQQEEEYSINGNGLPP 205
S K NV F + +E++++ + G G P
Sbjct: 151 SAKNATNVEQAFMTMA----AEIKKRMGPGATAGGGEKP 185
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 32/50 (64%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
+G+ ++L +WDTAGQE F IT +YYRGA ++ + D++SF W
Sbjct: 53 DGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQW 102
>gi|254583598|ref|XP_002497367.1| ZYRO0F03872p [Zygosaccharomyces rouxii]
gi|238940260|emb|CAR28434.1| ZYRO0F03872p [Zygosaccharomyces rouxii]
Length = 217
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 87/176 (49%), Gaps = 8/176 (4%)
Query: 11 VRLMLWDTAGQEEFDAITKAYYRG----AQACVITFSTIDRDSFEAAHSWKMKVSIKRTI 66
+R + + + +D+I K G ++C++ +D D F + + + K
Sbjct: 4 LRTVSASSGNGKSYDSIMKILLIGDSGVGKSCLLV-RFVD-DKFNPSFITTIGIDFKIKT 61
Query: 67 KECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW-KMKVEN 125
+ G++++L LWDTAGQE F IT AYYRGA ++ + D +F W K E+
Sbjct: 62 VDINGKKIKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFSNIRQWFKTVNEH 121
Query: 126 ECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYL 181
+ +LV NK D +D V E+ + L++ LG + +S K D NVN IF L
Sbjct: 122 ANDDAQLLLVGNKSD-MDTRTVTYEQGEALAKELGIPFIESSAKNDDNVNEIFFTL 176
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 47/91 (51%), Gaps = 8/91 (8%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVSIKRTI 66
G++++L LWDTAGQE F IT AYYRGA ++ + D +F W +T+
Sbjct: 65 NGKKIKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFSNIRQW------FKTV 118
Query: 67 KECEGEEVRLMLWDTAGQEEFDAITKAYYRG 97
E ++ +L+L + + D T Y +G
Sbjct: 119 NEHANDDAQLLL--VGNKSDMDTRTVTYEQG 147
>gi|15217622|ref|NP_171715.1| Ras-related protein RABD2A [Arabidopsis thaliana]
gi|205371858|sp|P28188.3|RAD2A_ARATH RecName: Full=Ras-related protein RABD2a; Short=AtRABD2a; AltName:
Full=Ras-related protein Ara-5; AltName:
Full=Ras-related protein Rab1B; Short=AtRab1B
gi|15450465|gb|AAK96526.1| At1g02130/T7I23_6 [Arabidopsis thaliana]
gi|16974457|gb|AAL31232.1| At1g02130/T7I23_6 [Arabidopsis thaliana]
gi|332189266|gb|AEE27387.1| Ras-related protein RABD2A [Arabidopsis thaliana]
Length = 203
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 81/176 (46%), Gaps = 9/176 (5%)
Query: 34 GAQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKA 93
G ++ FS DS+ ++ + V K E +G+ ++L +WDTAGQE F IT +
Sbjct: 20 GKSCLLLRFSD---DSYVESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSS 76
Query: 94 YYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEA 152
YYRGA +I + D +SF W +++ + + +LV NK DL + + E A
Sbjct: 77 YYRGAHGIIIVYDVTDEESFNNVKQWLSEIDRYASDNVNKLLVGNKSDLTENRAIPYETA 136
Query: 153 DLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSELRQQEEEYSINGNGLPPYTI 208
+ +G M TS K+ NV F ++ + Q GN P T+
Sbjct: 137 KAFADEIGIPFMETSAKDATNVEQAFMAMSASIKERMASQPA-----GNNARPPTV 187
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 31/50 (62%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
+G+ ++L +WDTAGQE F IT +YYRGA +I + D +SF W
Sbjct: 53 DGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQW 102
>gi|1370162|emb|CAA66447.1| RAB1A [Lotus japonicus]
gi|388504068|gb|AFK40100.1| unknown [Lotus japonicus]
Length = 201
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 75/146 (51%), Gaps = 1/146 (0%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
DS+ ++ + V K E +G+ ++L +WDTAGQE F IT +YYRGA +I +
Sbjct: 31 DSYVDSYISTIGVDFKIRTVELQGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDV 90
Query: 108 IDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
+ +SF W +++ + + +LV NK DL++ VV + A + LG + T
Sbjct: 91 TEMESFNNVKQWLNEIDRYANDSVCKLLVGNKSDLVENKVVDTQTAKAFADELGIPFLET 150
Query: 167 SVKEDINVNSIFRYLTTKCLSELRQQ 192
S K+ INV F + + ++ Q
Sbjct: 151 SAKDSINVEQAFLTMAAEIKKKMGSQ 176
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 31/50 (62%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
+G+ ++L +WDTAGQE F IT +YYRGA +I + + +SF W
Sbjct: 53 QGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQW 102
>gi|15229836|ref|NP_187779.1| Ras-related protein RABD1 [Arabidopsis thaliana]
gi|75338904|sp|Q9ZRE2.1|RABD1_ARATH RecName: Full=Ras-related protein RABD1; Short=AtRABD1; AltName:
Full=Ras-related protein ATFP8
gi|6671929|gb|AAF23189.1|AC016795_2 putative GTP-binding protein (ATFP8) [Arabidopsis thaliana]
gi|4097557|gb|AAD00111.1| ATFP8 [Arabidopsis thaliana]
gi|26451349|dbj|BAC42775.1| putative GTP-binding protein ATFP8 [Arabidopsis thaliana]
gi|28973343|gb|AAO63996.1| putative GTP-binding protein (ATFP8) [Arabidopsis thaliana]
gi|332641569|gb|AEE75090.1| Ras-related protein RABD1 [Arabidopsis thaliana]
Length = 205
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 75/140 (53%), Gaps = 2/140 (1%)
Query: 64 RTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 123
RTI++ +G+ ++L +WDTAGQE F IT +YYRGA +I + + +SF W ++
Sbjct: 48 RTIEQ-DGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDCTEMESFNNVKQWLSEI 106
Query: 124 ENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLT 182
+ E + +L+ NK D+++ VV+ E L+ LG + TS K+ INV F +
Sbjct: 107 DRYANESVCKLLIGNKNDMVESKVVSTETGRALADELGIPFLETSAKDSINVEQAFLTIA 166
Query: 183 TKCLSELRQQEEEYSINGNG 202
+ ++ Q +G G
Sbjct: 167 GEIKKKMGSQTNANKTSGPG 186
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 31/50 (62%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
+G+ ++L +WDTAGQE F IT +YYRGA +I + + +SF W
Sbjct: 53 DGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDCTEMESFNNVKQW 102
>gi|348500494|ref|XP_003437808.1| PREDICTED: ras-related protein Rab-3A-like [Oreochromis niloticus]
Length = 219
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 67/135 (49%), Gaps = 1/135 (0%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
DSF A + + K + ++L +WDTAGQE + IT AYYRGA ++ +
Sbjct: 44 DSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDI 103
Query: 108 IDRDSFEAAHSWKMKVENECGEIPTV-LVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
+ +SF A W +++ + V LV NK D+ D+ VVA E LS LG
Sbjct: 104 TNEESFNAVQDWSTQIKTYSWDNAQVLLVGNKCDMEDERVVAAERGRQLSEQLGFEFFEA 163
Query: 167 SVKEDINVNSIFRYL 181
S K++INV F L
Sbjct: 164 SAKDNINVKQTFERL 178
>gi|170592447|ref|XP_001900976.1| Rab family protein 8 [Brugia malayi]
gi|158591043|gb|EDP29656.1| Rab family protein 8, putative [Brugia malayi]
Length = 237
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 89/170 (52%), Gaps = 5/170 (2%)
Query: 35 AQACVITFSTIDRDSFEAAHSWKMKVSIK-RTIKECEGEEVRLMLWDTAGQEEFDAITKA 93
+ CV+ F D DSF + + + K RTI E +G++++L +WDTAGQE F IT A
Sbjct: 20 GKTCVL-FRFSD-DSFNNSFISTIGIDFKIRTI-ELDGKKIKLQIWDTAGQERFRTITTA 76
Query: 94 YYRGAQACVITFSTIDRDSFEAAHSWKMKV-ENECGEIPTVLVQNKIDLLDQSVVAPEEA 152
YYRGA ++ + + SF+ +W + E+ ++ +++ NK D+ ++ V+ E
Sbjct: 77 YYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVDRMIIGNKCDIEERRQVSRERG 136
Query: 153 DLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSELRQQEEEYSINGNG 202
+ L+ G + M TS K +INV F L + + +E++ G
Sbjct: 137 EQLAIEYGTKFMETSAKANINVEEAFFTLARDIKLKTERASQEHTTQNTG 186
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 63/135 (46%), Gaps = 12/135 (8%)
Query: 6 CEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV----- 60
+G++++L +WDTAGQE F IT AYYRGA ++ + + SF+ +W +
Sbjct: 52 LDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHAS 111
Query: 61 -SIKRTI--KECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAH 117
+ R I +C+ EE R + + Q + TK A+A + ++ F A
Sbjct: 112 SDVDRMIIGNKCDIEERRQVSRERGEQLAIEYGTKFMETSAKANI----NVEEAFFTLAR 167
Query: 118 SWKMKVENECGEIPT 132
K+K E E T
Sbjct: 168 DIKLKTERASQEHTT 182
>gi|99032489|pdb|2GF9|A Chain A, Crystal Structure Of Human Rab3d In Complex With Gdp
Length = 189
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 69/136 (50%), Gaps = 1/136 (0%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
DSF A + + K + ++L +WDTAGQE + IT AYYRGA ++ +
Sbjct: 45 DSFTPAFVSTVGIDFKVKTVYRHDKRIKLQIWDTAGQERYRTITTAYYRGAMGFLLMYDI 104
Query: 108 IDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
+++SF A W +++ + +LV NK DL D+ VV E+ L+ LG
Sbjct: 105 ANQESFAAVQDWATQIKTYSWDNAQVILVGNKCDLEDERVVPAEDGRRLADDLGFEFFEA 164
Query: 167 SVKEDINVNSIFRYLT 182
S KE+INV +F L
Sbjct: 165 SAKENINVKQVFERLV 180
>gi|357508061|ref|XP_003624319.1| Ras-like protein [Medicago truncatula]
gi|355499334|gb|AES80537.1| Ras-like protein [Medicago truncatula]
Length = 202
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 75/159 (47%), Gaps = 6/159 (3%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
DS+ ++ + V K E +G+ ++L +WDTAGQE F IT +YYRGA +I +
Sbjct: 31 DSYIDSYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDV 90
Query: 108 IDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
D +SF W +++ + + +LV NK DL + V+ + A + +G M T
Sbjct: 91 TDEESFNNVKQWLSEIDRYASDNVNKLLVGNKCDLTSERAVSYDTAKAFADEIGIPFMET 150
Query: 167 SVKEDINVNSIFRYLTTKCLSELRQQEEEYSINGNGLPP 205
S K+ NV F + + + Q N PP
Sbjct: 151 SAKDSTNVEQAFMAMASSIKDRMASQP-----TNNARPP 184
>gi|449431874|ref|XP_004133725.1| PREDICTED: ras-related protein RABD1-like isoform 1 [Cucumis
sativus]
Length = 204
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 77/155 (49%), Gaps = 1/155 (0%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
DS+ ++ + V K E +G+ ++L +WDTAGQE F IT +YYRGA +I +
Sbjct: 34 DSYVDSYISTIGVDFKIRTVELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDV 93
Query: 108 IDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
+ +SF W +++ + + +LV NK DL++ VV + A + LG + T
Sbjct: 94 TEMESFNNVKQWLNEIDRYANDSVCKLLVGNKCDLVENKVVDTQTAKAFADELGIPFLET 153
Query: 167 SVKEDINVNSIFRYLTTKCLSELRQQEEEYSINGN 201
S K+ NV F + + ++ Q +GN
Sbjct: 154 SAKDSTNVEQAFLTMAAEIKKKMGSQPTSSKSSGN 188
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 31/50 (62%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
+G+ ++L +WDTAGQE F IT +YYRGA +I + + +SF W
Sbjct: 56 DGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQW 105
>gi|349484|gb|AAA18826.1| GTP-binding protein homologue [Leishmania major]
Length = 200
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 68/132 (51%), Gaps = 1/132 (0%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
DS+ ++ + V K E + ++L +WDTAGQE F IT +YYRGA +I + T
Sbjct: 31 DSYTDSYISTIGVDFKIRTLNLESKVIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDT 90
Query: 108 IDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
D +SF +W ++E E + +LV NK DL+ + V + A + +LG + T
Sbjct: 91 TDMESFNNVKTWLSEIEKYASENVNKILVGNKCDLVTKKAVDTQMAKDFADSLGIPFLET 150
Query: 167 SVKEDINVNSIF 178
S K NV F
Sbjct: 151 SAKNSTNVEEAF 162
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 32/50 (64%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
E + ++L +WDTAGQE F IT +YYRGA +I + T D +SF +W
Sbjct: 53 ESKVIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDTTDMESFNNVKTW 102
>gi|76363526|sp|P51156.2|RAB26_RAT RecName: Full=Ras-related protein Rab-26
gi|38303826|gb|AAH61984.1| Rab26 protein [Rattus norvegicus]
gi|149052027|gb|EDM03844.1| RAB26, member RAS oncogene family [Rattus norvegicus]
Length = 257
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 80/145 (55%), Gaps = 8/145 (5%)
Query: 60 VSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 119
+ + + + +G +V+L +WDTAGQE F ++T AYYR A A ++ + ++DSF+ +W
Sbjct: 100 IDFRNKVLDVDGMKVKLQIWDTAGQERFRSVTHAYYRDAHALLLLYDITNKDSFDNIQAW 159
Query: 120 KMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIF 178
+++ + + +L+ NK+D + VV E+ + L++ G M TS K +NV+ F
Sbjct: 160 LTEIQEYAQQDVVLMLLGNKVDSTQERVVKREDGEKLAKEYGLPFMETSAKSGLNVDLAF 219
Query: 179 RYL-------TTKCLSELRQQEEEY 196
+ +TK SE R + +Y
Sbjct: 220 TAIAKELKQRSTKAPSEPRFRLHDY 244
Score = 59.7 bits (143), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 45/73 (61%), Gaps = 6/73 (8%)
Query: 6 CEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVSIKRT 65
+G +V+L +WDTAGQE F ++T AYYR A A ++ + ++DSF+ +W +
Sbjct: 109 VDGMKVKLQIWDTAGQERFRSVTHAYYRDAHALLLLYDITNKDSFDNIQAWLTE------ 162
Query: 66 IKECEGEEVRLML 78
I+E ++V LML
Sbjct: 163 IQEYAQQDVVLML 175
>gi|344272308|ref|XP_003407975.1| PREDICTED: ras-related protein Rab-3C-like [Loxodonta africana]
Length = 219
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 72/136 (52%), Gaps = 3/136 (2%)
Query: 48 DSFEAAHSWKMKVSIK-RTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFS 106
DSF +A + + K +T+ + E + ++L +WDTAGQE + IT AYYRGA ++ +
Sbjct: 45 DSFTSAFVSTVGIDFKVKTVFKNE-KRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYD 103
Query: 107 TIDRDSFEAAHSWKMKVENEC-GEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMR 165
+ +SF A W +++ +LV NK D+ D+ V++ E L LG
Sbjct: 104 ITNEESFNAVQDWSTQIKTYSWDNAQVILVGNKCDMEDERVISTERGQHLGEQLGFEFFE 163
Query: 166 TSVKEDINVNSIFRYL 181
TS K++INV F L
Sbjct: 164 TSAKDNINVKQTFERL 179
>gi|398017462|ref|XP_003861918.1| small GTP-binding protein Rab1, putative [Leishmania donovani]
gi|322500146|emb|CBZ35221.1| small GTP-binding protein Rab1, putative [Leishmania donovani]
Length = 200
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 78/161 (48%), Gaps = 3/161 (1%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
DS+ ++ + V K E + ++L +WDTAGQE F IT +YYRGA +I + T
Sbjct: 31 DSYTDSYISTIGVDFKIRTLNLESKVIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDT 90
Query: 108 IDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
D +SF +W ++E E + +LV NK DL+ + V + A + +LG + T
Sbjct: 91 TDMESFNNVKTWLSEIEKYASENVNKILVGNKCDLVTKKAVDTQMAKDFADSLGIPFLET 150
Query: 167 SVKEDINVNSIFRYLTTKCLSELRQQEEEYSINGNGL--PP 205
S K NV F + + + L E S + L PP
Sbjct: 151 SAKNSTNVEEAFIQMASGIKARLAVSGEVKSASRPNLQNPP 191
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 32/50 (64%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
E + ++L +WDTAGQE F IT +YYRGA +I + T D +SF +W
Sbjct: 53 ESKVIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDTTDMESFNNVKTW 102
>gi|301070251|gb|ADK55544.1| RAB10, member RAS oncogene family [Zonotrichia albicollis]
Length = 157
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 65/120 (54%), Gaps = 1/120 (0%)
Query: 68 ECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENEC 127
E +G++++L +WDTAGQE F IT +YYRGA ++ + + SFE W ++
Sbjct: 9 ELQGKKIKLQIWDTAGQERFHTITTSYYRGAMGILLVYDITNAKSFENISKWLRNIDEHA 68
Query: 128 GE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCL 186
E + +L+ NK D+ D+ VV + + ++R G R TS K +IN+ F L L
Sbjct: 69 NEDVERMLLGNKCDMEDKRVVPKAKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDIL 128
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 48/88 (54%), Gaps = 7/88 (7%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVSIKRTI 66
+G++++L +WDTAGQE F IT +YYRGA ++ + + SFE W R I
Sbjct: 11 QGKKIKLQIWDTAGQERFHTITTSYYRGAMGILLVYDITNAKSFENISKW------LRNI 64
Query: 67 KECEGEEV-RLMLWDTAGQEEFDAITKA 93
E E+V R++L + E+ + KA
Sbjct: 65 DEHANEDVERMLLGNKCDMEDKRVVPKA 92
>gi|229608951|ref|NP_659124.2| ras-related protein Rab-7L1 [Mus musculus]
Length = 204
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 84/162 (51%), Gaps = 8/162 (4%)
Query: 47 RDSFEAAHSWKMKVSIK-RTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITF 105
+DSF + + V + ++ + E VRL LWD AGQE F ++T+ YYR A ACVI F
Sbjct: 29 QDSFSKHYKSTVGVDFALKVLQWSDSEMVRLQLWDIAGQERFTSMTRLYYRDASACVIMF 88
Query: 106 STIDRDSFEAAHSWKMKVENE----CGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALG 160
+ +F + WK ++++ GE +P +L+ NK D L V+ ++ D S+ G
Sbjct: 89 DVTNATTFSNSQRWKQDLDSKLTLPSGEPVPCLLLANKSD-LSPWAVSRDQIDQFSKENG 147
Query: 161 -CRLMRTSVKEDINVNSIFRYLTTKCLSELRQQEEEYSINGN 201
TSVKE+ N+N R L K ++ R+ S GN
Sbjct: 148 FTGWTETSVKENKNINEAMRVLVEKMMNNSREDVMSLSTQGN 189
Score = 62.8 bits (151), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVSIKRTI 66
+ E VRL LWD AGQE F ++T+ YYR A ACVI F + +F + WK + K T+
Sbjct: 53 DSEMVRLQLWDIAGQERFTSMTRLYYRDASACVIMFDVTNATTFSNSQRWKQDLDSKLTL 112
Query: 67 KECEGEEVRLML 78
GE V +L
Sbjct: 113 P--SGEPVPCLL 122
>gi|389593257|ref|XP_003721882.1| putative small GTP-binding protein Rab1 [Leishmania major strain
Friedlin]
gi|321438384|emb|CBZ12137.1| putative small GTP-binding protein Rab1 [Leishmania major strain
Friedlin]
Length = 200
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 68/132 (51%), Gaps = 1/132 (0%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
DS+ ++ + V K E + ++L +WDTAGQE F IT +YYRGA +I + T
Sbjct: 31 DSYTDSYISTIGVDFKIRTLNLESKVIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDT 90
Query: 108 IDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
D +SF +W ++E E + +LV NK DL+ + V + A + +LG + T
Sbjct: 91 TDMESFNNVKTWLSEIEKYASENVNKILVGNKCDLVTKKAVDTQMAKDFADSLGIPFLET 150
Query: 167 SVKEDINVNSIF 178
S K NV F
Sbjct: 151 SAKNSTNVEEAF 162
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 32/50 (64%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
E + ++L +WDTAGQE F IT +YYRGA +I + T D +SF +W
Sbjct: 53 ESKVIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDTTDMESFNNVKTW 102
>gi|256073243|ref|XP_002572941.1| rab-related GTP-binding protein [Schistosoma mansoni]
gi|1016750|gb|AAA79138.1| rab-related GTP-binding protein [Schistosoma mansoni]
gi|353230960|emb|CCD77377.1| rab-related GTP-binding protein [Schistosoma mansoni]
Length = 205
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 74/146 (50%), Gaps = 5/146 (3%)
Query: 68 ECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVEN-E 126
E EG++++L +WDTAGQE F IT +YYRGA ++ + R +F+ +W + +
Sbjct: 52 ELEGKKIKLQIWDTAGQERFHTITSSYYRGAMGIMLIYDITSRQTFDNVQTWMNRTFSLA 111
Query: 127 CGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCL 186
E+ +L+ NK D+ VV+ EE + G + TS K NV+ F LT L
Sbjct: 112 SNEVEKLLIANKCDMAHNRVVSYEEGRQKAEEYGIGFLETSAKSSTNVHKAFEELTRAIL 171
Query: 187 --SELRQQEEEYSINGNGL--PPYTI 208
S +R+ E + L PP +I
Sbjct: 172 HNSSIRRHESSTVTQVHRLAEPPNSI 197
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 41/72 (56%), Gaps = 5/72 (6%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVSIKRTI 66
EG++++L +WDTAGQE F IT +YYRGA ++ + R +F+ +W + RT
Sbjct: 54 EGKKIKLQIWDTAGQERFHTITSSYYRGAMGIMLIYDITSRQTFDNVQTW-----MNRTF 108
Query: 67 KECEGEEVRLML 78
E +L++
Sbjct: 109 SLASNEVEKLLI 120
>gi|154339774|ref|XP_001565844.1| putative small GTP-binding protein Rab1 [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134063162|emb|CAM45362.1| putative small GTP-binding protein Rab1 [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 200
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 79/161 (49%), Gaps = 3/161 (1%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
DS+ ++ + V K + + ++L +WDTAGQE F IT +YYRGA +I + T
Sbjct: 31 DSYTDSYISTIGVDFKIRTLNLDSKVIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDT 90
Query: 108 IDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
D +SF +W +++ E + +LV NK DL+ + V + A + +LG + T
Sbjct: 91 TDMESFNNVKTWLSEIDKYASENVNKILVGNKCDLVTKKAVDTQMAKDFADSLGIPFLET 150
Query: 167 SVKEDINVNSIFRYLTTKCLSELRQQEEEYSINGNGL--PP 205
S K NV F + + + L E S++ L PP
Sbjct: 151 SAKNSTNVEEAFIQMASGIKTRLAVSGETKSVSRPNLQNPP 191
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 30/46 (65%)
Query: 11 VRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
++L +WDTAGQE F IT +YYRGA +I + T D +SF +W
Sbjct: 57 IKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDTTDMESFNNVKTW 102
>gi|389750829|gb|EIM91902.1| rab-type small GTP-binding protein [Stereum hirsutum FP-91666 SS1]
Length = 210
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/119 (38%), Positives = 63/119 (52%), Gaps = 2/119 (1%)
Query: 64 RTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 123
RTI E +G+ ++L +WDTAGQE F IT AYYRGA ++ + D SF +W +
Sbjct: 49 RTI-ELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRTWHSNI 107
Query: 124 ENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYL 181
E E + +L+ NK D D+ V E+ L+ LG R M TS K + V F L
Sbjct: 108 EQHASEGVNKILIGNKSDWTDKKAVTEEQGRELAEELGIRFMETSAKINEGVEEAFFTL 166
Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 32/54 (59%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 60
+G+ ++L +WDTAGQE F IT AYYRGA ++ + D SF +W +
Sbjct: 54 DGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRTWHSNI 107
>gi|306014631|gb|ADM76369.1| Rab-like protein, partial [Picea sitchensis]
gi|306014633|gb|ADM76370.1| Rab-like protein, partial [Picea sitchensis]
gi|306014635|gb|ADM76371.1| Rab-like protein, partial [Picea sitchensis]
gi|306014637|gb|ADM76372.1| Rab-like protein, partial [Picea sitchensis]
gi|306014639|gb|ADM76373.1| Rab-like protein, partial [Picea sitchensis]
gi|306014641|gb|ADM76374.1| Rab-like protein, partial [Picea sitchensis]
gi|306014643|gb|ADM76375.1| Rab-like protein, partial [Picea sitchensis]
gi|306014645|gb|ADM76376.1| Rab-like protein, partial [Picea sitchensis]
gi|306014647|gb|ADM76377.1| Rab-like protein, partial [Picea sitchensis]
gi|306014649|gb|ADM76378.1| Rab-like protein, partial [Picea sitchensis]
gi|306014651|gb|ADM76379.1| Rab-like protein, partial [Picea sitchensis]
gi|306014653|gb|ADM76380.1| Rab-like protein, partial [Picea sitchensis]
gi|306014655|gb|ADM76381.1| Rab-like protein, partial [Picea sitchensis]
gi|306014657|gb|ADM76382.1| Rab-like protein, partial [Picea sitchensis]
gi|306014659|gb|ADM76383.1| Rab-like protein, partial [Picea sitchensis]
gi|306014661|gb|ADM76384.1| Rab-like protein, partial [Picea sitchensis]
gi|306014663|gb|ADM76385.1| Rab-like protein, partial [Picea sitchensis]
gi|306014665|gb|ADM76386.1| Rab-like protein, partial [Picea sitchensis]
gi|306014667|gb|ADM76387.1| Rab-like protein, partial [Picea sitchensis]
gi|306014669|gb|ADM76388.1| Rab-like protein, partial [Picea sitchensis]
gi|306014671|gb|ADM76389.1| Rab-like protein, partial [Picea sitchensis]
gi|306014673|gb|ADM76390.1| Rab-like protein, partial [Picea sitchensis]
gi|306014675|gb|ADM76391.1| Rab-like protein, partial [Picea sitchensis]
gi|306014677|gb|ADM76392.1| Rab-like protein, partial [Picea sitchensis]
gi|306014679|gb|ADM76393.1| Rab-like protein, partial [Picea sitchensis]
gi|306014681|gb|ADM76394.1| Rab-like protein, partial [Picea sitchensis]
gi|306014683|gb|ADM76395.1| Rab-like protein, partial [Picea sitchensis]
gi|306014685|gb|ADM76396.1| Rab-like protein, partial [Picea sitchensis]
gi|306014687|gb|ADM76397.1| Rab-like protein, partial [Picea sitchensis]
gi|306014689|gb|ADM76398.1| Rab-like protein, partial [Picea sitchensis]
gi|306014691|gb|ADM76399.1| Rab-like protein, partial [Picea sitchensis]
gi|306014693|gb|ADM76400.1| Rab-like protein, partial [Picea sitchensis]
gi|306014695|gb|ADM76401.1| Rab-like protein, partial [Picea sitchensis]
gi|306014697|gb|ADM76402.1| Rab-like protein, partial [Picea sitchensis]
gi|306014699|gb|ADM76403.1| Rab-like protein, partial [Picea sitchensis]
gi|306014701|gb|ADM76404.1| Rab-like protein, partial [Picea sitchensis]
gi|306014703|gb|ADM76405.1| Rab-like protein, partial [Picea sitchensis]
gi|306014705|gb|ADM76406.1| Rab-like protein, partial [Picea sitchensis]
gi|306014707|gb|ADM76407.1| Rab-like protein, partial [Picea sitchensis]
gi|306014709|gb|ADM76408.1| Rab-like protein, partial [Picea sitchensis]
gi|306014711|gb|ADM76409.1| Rab-like protein, partial [Picea sitchensis]
gi|306014713|gb|ADM76410.1| Rab-like protein, partial [Picea sitchensis]
gi|306014715|gb|ADM76411.1| Rab-like protein, partial [Picea sitchensis]
gi|306014717|gb|ADM76412.1| Rab-like protein, partial [Picea sitchensis]
Length = 160
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/130 (36%), Positives = 69/130 (53%), Gaps = 6/130 (4%)
Query: 70 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENECG- 128
E VRL LWDTAGQE F ++ +Y R + VI F +R SF W +V E G
Sbjct: 7 EDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVFDVANRQSFLNTARWIEEVRTERGS 66
Query: 129 EIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLTT----- 183
++ VLV NK DL+D+ V+ EE D +R G + TS K N+ ++FR +
Sbjct: 67 DVIIVLVGNKTDLVDKRQVSIEEGDAKAREFGVMFIETSAKAGFNIKALFRKIAAALPGM 126
Query: 184 KCLSELRQQE 193
+ LS +Q++
Sbjct: 127 ETLSSTKQED 136
Score = 49.7 bits (117), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 31/58 (53%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVSIKR 64
E VRL LWDTAGQE F ++ +Y R + VI F +R SF W +V +R
Sbjct: 7 EDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVFDVANRQSFLNTARWIEEVRTER 64
>gi|118490011|gb|ABK96799.1| ras-related GTP binding protein [Solanum tuberosum]
Length = 203
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 77/159 (48%), Gaps = 5/159 (3%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
D++ ++ + V K E +G+ ++L +WDTAGQE F IT +YYRGA ++ +
Sbjct: 31 DTYLESYISTIGVDFKIRTVEQDGKTIKLRIWDTAGQERFRTITSSYYRGAHGIIVVYDV 90
Query: 108 IDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
D++SF W +++ + + +LV NK DL VV+ E A + +G + T
Sbjct: 91 TDQESFNNVKQWLSEIDRYASDNVNKILVGNKADLTANRVVSYETAKAFADEIGIPFLET 150
Query: 167 SVKEDINVNSIFRYLTTKCLSELRQQEEEYSINGNGLPP 205
S K+ NV F +T + + Q S PP
Sbjct: 151 SAKDATNVEQAFMAMTGAIKNRMASQPASNSAK----PP 185
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 32/50 (64%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
+G+ ++L +WDTAGQE F IT +YYRGA ++ + D++SF W
Sbjct: 53 DGKTIKLRIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQW 102
>gi|348568990|ref|XP_003470281.1| PREDICTED: ras-related protein Rab-3C-like [Cavia porcellus]
Length = 219
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 72/136 (52%), Gaps = 3/136 (2%)
Query: 48 DSFEAAHSWKMKVSIK-RTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFS 106
DSF +A + + K +T+ + E + ++L +WDTAGQE + IT AYYRGA ++ +
Sbjct: 45 DSFTSAFVSTVGIDFKVKTVFKNE-KRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYD 103
Query: 107 TIDRDSFEAAHSWKMKVENEC-GEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMR 165
+ +SF A W +++ +LV NK D+ D+ V++ E L LG
Sbjct: 104 ITNEESFNAVQDWSTQIKTYSWDNAQVILVGNKCDMEDERVISTERGQRLGEQLGFEFFE 163
Query: 166 TSVKEDINVNSIFRYL 181
TS K++INV F L
Sbjct: 164 TSAKDNINVKQTFERL 179
>gi|126315213|ref|XP_001366023.1| PREDICTED: ras-related protein Rab-3C-like [Monodelphis domestica]
Length = 219
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 72/136 (52%), Gaps = 3/136 (2%)
Query: 48 DSFEAAHSWKMKVSIK-RTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFS 106
DSF +A + + K +T+ + E + ++L +WDTAGQE + IT AYYRGA ++ +
Sbjct: 45 DSFTSAFVSTVGIDFKVKTVFKNE-KRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYD 103
Query: 107 TIDRDSFEAAHSWKMKVENEC-GEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMR 165
+ +SF A W +++ +LV NK D+ D+ V++ E L LG
Sbjct: 104 ITNEESFNAVQDWSTQIKTYSWDNAQVILVGNKCDMEDERVISTERGKHLGEQLGFEFFE 163
Query: 166 TSVKEDINVNSIFRYL 181
TS K++INV F L
Sbjct: 164 TSAKDNINVKQTFERL 179
>gi|87295018|gb|ABD36921.1| Rab1 [Pinus pinaster]
Length = 202
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 68/132 (51%), Gaps = 1/132 (0%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
DS+ ++ + V K E +G+ ++L +WDTAGQE F IT +YYRGA +I +
Sbjct: 31 DSYVGSYISTIGVDFKIRTIELDGKAIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDV 90
Query: 108 IDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
D DSF W +++ + + +LV NK DL ++ V + A + LG + T
Sbjct: 91 TDMDSFNNVKQWLSEIDKYASDNVSKLLVGNKCDLTEKQAVDQQMAKSFADELGIPFLET 150
Query: 167 SVKEDINVNSIF 178
S K+ NV F
Sbjct: 151 SAKDASNVEQAF 162
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 31/50 (62%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
+G+ ++L +WDTAGQE F IT +YYRGA +I + D DSF W
Sbjct: 53 DGKAIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDMDSFNNVKQW 102
>gi|395850861|ref|XP_003797992.1| PREDICTED: ras-related protein Rab-3D [Otolemur garnettii]
Length = 219
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 75/160 (46%), Gaps = 2/160 (1%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
DSF A + + K + ++L +WDTAGQE + IT YYRGA ++ +
Sbjct: 45 DSFTPAFVSTVGIDFKVKTVYRHDKRIKLQIWDTAGQERYRTITTTYYRGAMGFLLMYDV 104
Query: 108 IDRDSFEAAHSWKMKVENEC-GEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
+++SF A W +++ +LV NK DL D+ VV E+ L+ LG
Sbjct: 105 ANQESFTAVQDWATQIKTYSWDNAQVILVGNKCDLEDERVVPAEDGRRLANDLGFEFFEA 164
Query: 167 SVKEDINVNSIFRYLTTKCLSELRQQ-EEEYSINGNGLPP 205
S KE+INV +F L ++ + E S NG P
Sbjct: 165 SAKENINVKQVFERLVDVICEKMNESLEPSCSPGSNGKGP 204
>gi|350594328|ref|XP_003359827.2| PREDICTED: ras-related protein Rab-3C-like isoform 1 [Sus scrofa]
Length = 225
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 72/136 (52%), Gaps = 3/136 (2%)
Query: 48 DSFEAAHSWKMKVSIK-RTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFS 106
DSF +A + + K +T+ + E + ++L +WDTAGQE + IT AYYRGA ++ +
Sbjct: 51 DSFTSAFVSTVGIDFKVKTVFKNE-KRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYD 109
Query: 107 TIDRDSFEAAHSWKMKVENEC-GEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMR 165
+ +SF A W +++ +LV NK D+ D+ V++ E L LG
Sbjct: 110 ITNEESFNAVQDWSTQIKTYSWDNAQVILVGNKCDMEDERVISTERGQHLGEQLGFEFFE 169
Query: 166 TSVKEDINVNSIFRYL 181
TS K++INV F L
Sbjct: 170 TSAKDNINVKQTFERL 185
>gi|345793828|ref|XP_851045.2| PREDICTED: ras-related protein Rab-3C [Canis lupus familiaris]
Length = 219
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 72/136 (52%), Gaps = 3/136 (2%)
Query: 48 DSFEAAHSWKMKVSIK-RTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFS 106
DSF +A + + K +T+ + E + ++L +WDTAGQE + IT AYYRGA ++ +
Sbjct: 45 DSFTSAFVSTVGIDFKVKTVFKNE-KRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYD 103
Query: 107 TIDRDSFEAAHSWKMKVENEC-GEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMR 165
+ +SF A W +++ +LV NK D+ D+ V++ E L LG
Sbjct: 104 ITNEESFNAVQDWSTQIKTYSWDNAQVILVGNKCDMEDERVISTERGQHLGEQLGFEFFE 163
Query: 166 TSVKEDINVNSIFRYL 181
TS K++INV F L
Sbjct: 164 TSAKDNINVKQTFERL 179
>gi|217841|dbj|BAA00832.1| small GTP-binding protein [Arabidopsis thaliana]
Length = 195
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 76/162 (46%), Gaps = 6/162 (3%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
DS+ ++ + V K E +G+ ++L +WDTAGQE F IT +YYRGA +I +
Sbjct: 23 DSYVESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDV 82
Query: 108 IDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
D +SF W +++ + + +LV NK DL + + E A + +G M T
Sbjct: 83 TDEESFNNVKQWLSEIDRYASDNVNKLLVGNKSDLTENRAIPYETAKAFADEIGIPFMET 142
Query: 167 SVKEDINVNSIFRYLTTKCLSELRQQEEEYSINGNGLPPYTI 208
S K+ NV F ++ + Q GN P T+
Sbjct: 143 SAKDATNVEQAFMAMSASIKERMASQPA-----GNNARPPTV 179
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 31/50 (62%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
+G+ ++L +WDTAGQE F IT +YYRGA +I + D +SF W
Sbjct: 45 DGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQW 94
>gi|51316505|sp|Q91YQ1.1|RAB7L_MOUSE RecName: Full=Ras-related protein Rab-7L1; AltName: Full=Rab-7-like
protein 1
gi|16359355|gb|AAH16133.1| RAB7, member RAS oncogene family-like 1 [Mus musculus]
gi|20809768|gb|AAH29056.1| RAB7, member RAS oncogene family-like 1 [Mus musculus]
gi|112293019|dbj|BAF02887.1| Rab29 [Mus musculus]
gi|148707749|gb|EDL39696.1| RAB7, member RAS oncogene family-like 1, isoform CRA_a [Mus
musculus]
Length = 204
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 84/162 (51%), Gaps = 8/162 (4%)
Query: 47 RDSFEAAHSWKMKVSIK-RTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITF 105
+DSF + + V + ++ + E VRL LWD AGQE F ++T+ YYR A ACVI F
Sbjct: 29 QDSFSKHYKSTVGVDFALKVLQWSDSEMVRLQLWDIAGQERFTSMTRLYYRDASACVIMF 88
Query: 106 STIDRDSFEAAHSWKMKVENE----CGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALG 160
+ +F + WK ++++ GE +P +L+ NK D L V+ ++ D S+ G
Sbjct: 89 DVTNATTFSNSQRWKQDLDSKLTLPSGEPVPCLLLANKSD-LSPWAVSRDQIDRFSKENG 147
Query: 161 -CRLMRTSVKEDINVNSIFRYLTTKCLSELRQQEEEYSINGN 201
TSVKE+ N+N R L K ++ R+ S GN
Sbjct: 148 FTGWTETSVKENKNINEAMRVLVEKMMNNSREDVMSLSTQGN 189
Score = 62.8 bits (151), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVSIKRTI 66
+ E VRL LWD AGQE F ++T+ YYR A ACVI F + +F + WK + K T+
Sbjct: 53 DSEMVRLQLWDIAGQERFTSMTRLYYRDASACVIMFDVTNATTFSNSQRWKQDLDSKLTL 112
Query: 67 KECEGEEVRLML 78
GE V +L
Sbjct: 113 P--SGEPVPCLL 122
>gi|114051149|ref|NP_001039674.1| ras-related protein Rab-26 [Bos taurus]
gi|108860918|sp|Q29RR0.1|RAB26_BOVIN RecName: Full=Ras-related protein Rab-26
gi|88954231|gb|AAI14067.1| RAB26, member RAS oncogene family [Bos taurus]
gi|296473473|tpg|DAA15588.1| TPA: ras-related protein Rab-26 [Bos taurus]
Length = 256
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 80/145 (55%), Gaps = 8/145 (5%)
Query: 60 VSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 119
+ + + + +G +V+L +WDTAGQE F ++T AYYR A A ++ + ++ SF++ +W
Sbjct: 99 IDFRNKVVDVDGMKVKLQIWDTAGQERFRSVTHAYYRDAHALLLLYDVTNKASFDSIQAW 158
Query: 120 KMKV-ENECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIF 178
++ E+ ++ +L+ NK+D + V E+A+ L++ G M TS K +NV+ F
Sbjct: 159 LTEIQEHAQDDVVLMLLGNKVDSAQERAVKREDAEKLAKDYGLPFMETSAKTGLNVDLAF 218
Query: 179 RYLT-------TKCLSELRQQEEEY 196
+ TK SE R Q +Y
Sbjct: 219 TAIAKELKQRHTKAPSEPRFQLHDY 243
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 45/73 (61%), Gaps = 6/73 (8%)
Query: 6 CEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVSIKRT 65
+G +V+L +WDTAGQE F ++T AYYR A A ++ + ++ SF++ +W +
Sbjct: 108 VDGMKVKLQIWDTAGQERFRSVTHAYYRDAHALLLLYDVTNKASFDSIQAWLTE------ 161
Query: 66 IKECEGEEVRLML 78
I+E ++V LML
Sbjct: 162 IQEHAQDDVVLML 174
>gi|388500972|gb|AFK38552.1| unknown [Medicago truncatula]
Length = 202
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 75/159 (47%), Gaps = 6/159 (3%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
DS+ ++ + V K E +G+ ++L +WDTAGQE F IT +YYRGA +I +
Sbjct: 31 DSYIDSYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDV 90
Query: 108 IDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
D +SF W +++ + + +LV NK DL + V+ + A + +G M T
Sbjct: 91 TDEESFNNVKQWLSEIDRYASDNVNKLLVGNKCDLTSERAVSYDTAKAFADEIGIPFMET 150
Query: 167 SVKEDINVNSIFRYLTTKCLSELRQQEEEYSINGNGLPP 205
S K+ NV F + + + Q N PP
Sbjct: 151 SAKDSTNVEQAFMAMASSIKDRMASQP-----TNNARPP 184
>gi|296475820|tpg|DAA17935.1| TPA: ras-related protein Rab-3C [Bos taurus]
Length = 219
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 72/136 (52%), Gaps = 3/136 (2%)
Query: 48 DSFEAAHSWKMKVSIK-RTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFS 106
DSF +A + + K +T+ + E + ++L +WDTAGQE + IT AYYRGA ++ +
Sbjct: 45 DSFTSAFVSTVGIDFKVKTVFKNE-KRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYD 103
Query: 107 TIDRDSFEAAHSWKMKVENEC-GEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMR 165
+ +SF A W +++ +LV NK D+ D+ V++ E L LG
Sbjct: 104 ITNEESFNAVQDWSTQIKTYSWDNAQVILVGNKCDMEDERVISTERGQHLGEQLGFEFFE 163
Query: 166 TSVKEDINVNSIFRYL 181
TS K++INV F L
Sbjct: 164 TSAKDNINVKQTFERL 179
>gi|256082187|ref|XP_002577342.1| rab 3 and [Schistosoma mansoni]
Length = 236
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 69/135 (51%), Gaps = 1/135 (0%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
DSF +A + + K + + V+L +WDTAGQE + IT AYYRGA ++ +
Sbjct: 57 DSFTSAFVSTVGIDFKVKTIFRQDKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDI 116
Query: 108 IDRDSFEAAHSWKMKVENEC-GEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
+ +SF A W +++ VLV NK DL+D V+ + L+ LG
Sbjct: 117 TNEESFNAVQDWVTQIKTYSWDNAQVVLVGNKCDLVDDRAVSVDRGRHLAHQLGLEFFEA 176
Query: 167 SVKEDINVNSIFRYL 181
S KE++NV ++F L
Sbjct: 177 SAKENVNVKNVFDRL 191
>gi|198436228|ref|XP_002119506.1| PREDICTED: similar to Rab3 [Ciona intestinalis]
Length = 220
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 71/135 (52%), Gaps = 1/135 (0%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
DSF +A + + K + + V+L +WDTAGQE + IT AYYRGA ++ +
Sbjct: 45 DSFTSAFVSTVGIDFKVKTVFRQDKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDI 104
Query: 108 IDRDSFEAAHSWKMKVENECGEIPTV-LVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
+ +SF + W +++ + V LV NK D+ D+ V++ E L+ LG T
Sbjct: 105 TNEESFNSVQDWSTQIKTYSWDNAQVTLVGNKCDMEDERVISTERGKQLADQLGFEFFET 164
Query: 167 SVKEDINVNSIFRYL 181
S K+++NV +F L
Sbjct: 165 SAKDNVNVKQVFERL 179
>gi|218199254|gb|EEC81681.1| hypothetical protein OsI_25244 [Oryza sativa Indica Group]
gi|222636607|gb|EEE66739.1| hypothetical protein OsJ_23431 [Oryza sativa Japonica Group]
Length = 192
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 64/116 (55%), Gaps = 2/116 (1%)
Query: 64 RTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 123
RT+ E +G+ V+L +WDTAGQE F IT AYYRGA ++ + D SF +W +
Sbjct: 32 RTV-ELDGKRVKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNI 90
Query: 124 ENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIF 178
E + + +LV NK+D+ + VV+ + L+ G + TS K + NV +F
Sbjct: 91 EQHASDNVNKILVGNKVDMDTKRVVSTAQGQKLADEYGMKFFETSAKTNQNVEQVF 146
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 54/124 (43%), Gaps = 27/124 (21%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW---------- 56
+G+ V+L +WDTAGQE F IT AYYRGA ++ + D SF +W
Sbjct: 37 DGKRVKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASD 96
Query: 57 ---------KMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
K+ + KR + +G++ L D G + F+ K Q F T
Sbjct: 97 NVNKILVGNKVDMDTKRVVSTAQGQK----LADEYGMKFFETSAKTNQNVEQ----VFFT 148
Query: 108 IDRD 111
I RD
Sbjct: 149 IARD 152
>gi|407044250|gb|EKE42471.1| Rab family GTPase [Entamoeba nuttalli P19]
Length = 195
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 63/115 (54%)
Query: 70 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGE 129
+G+ ++ +WDTAGQE + ++T YYRG+ A ++ + SF A W ++ E
Sbjct: 53 DGDTIKFEIWDTAGQERYHSLTPMYYRGSNAALVVYDITSDSSFIQAKKWIDELRGSGNE 112
Query: 130 IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLTTK 184
LV NK DL D V+ EEA+ +R+L + TS K +INVN +F + K
Sbjct: 113 AVIFLVGNKCDLADSRVITKEEAEGYARSLSIDYIETSAKANINVNELFDQIARK 167
>gi|321453282|gb|EFX64533.1| hypothetical protein DAPPUDRAFT_304534 [Daphnia pulex]
Length = 219
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 72/135 (53%), Gaps = 1/135 (0%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
DSF +A + + K + + V+L +WDTAGQE + IT AYYRGA ++ +
Sbjct: 44 DSFTSAFVSTVGIDFKVKTVFRQDKRVKLQIWDTAGQERYRTITTAYYRGAMGFLLMYDI 103
Query: 108 IDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
+ +SF + W +++ + +LV NK D+ D+ V++ E L+ LG T
Sbjct: 104 TNEESFNSVQDWCTQIKTYSWDNAQVILVGNKCDMEDERVISYERGKQLADQLGLEFFET 163
Query: 167 SVKEDINVNSIFRYL 181
S KE+INV ++F L
Sbjct: 164 SAKENINVKAVFERL 178
>gi|297842904|ref|XP_002889333.1| ATRAB1B [Arabidopsis lyrata subsp. lyrata]
gi|297335175|gb|EFH65592.1| ATRAB1B [Arabidopsis lyrata subsp. lyrata]
Length = 203
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 82/176 (46%), Gaps = 9/176 (5%)
Query: 34 GAQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKA 93
G ++ FS DS+ ++ + V K E +G+ ++L +WDTAGQE F IT +
Sbjct: 20 GKSCLLLRFSD---DSYVESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSS 76
Query: 94 YYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEA 152
YYRGA +I + D++SF W +++ + + +LV NK DL + V E A
Sbjct: 77 YYRGAHGIIIVYDVTDQESFNNVKQWLSEIDRYASDNVNKLLVGNKSDLTENRDVPYETA 136
Query: 153 DLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSELRQQEEEYSINGNGLPPYTI 208
+ +G M TS K+ NV F ++ + Q GN P T+
Sbjct: 137 KAFADEIGIPFMETSAKDATNVEQAFMAMSASIKERMASQPA-----GNNARPPTV 187
Score = 59.3 bits (142), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 32/50 (64%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
+G+ ++L +WDTAGQE F IT +YYRGA +I + D++SF W
Sbjct: 53 DGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQW 102
>gi|257222596|gb|ACV52576.1| ras-related GTP-binding protein [Nicotiana benthamiana]
Length = 131
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 70/130 (53%), Gaps = 2/130 (1%)
Query: 64 RTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKV 123
RT+ + +G+ ++L +WDTAGQE F IT +YYRGA ++ + D++SF W ++
Sbjct: 2 RTVDQ-DGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLSEI 60
Query: 124 ENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLT 182
+ + + +LV NK DL VV+ E A + +G + TS K+ NV F +T
Sbjct: 61 DRYASDNVNKILVGNKSDLTANRVVSYETAKAFADEIGIPFLETSAKDATNVEQAFMAMT 120
Query: 183 TKCLSELRQQ 192
+ + + Q
Sbjct: 121 SAIKNRMASQ 130
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 32/50 (64%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
+G+ ++L +WDTAGQE F IT +YYRGA ++ + D++SF W
Sbjct: 7 DGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQW 56
>gi|66823707|ref|XP_645208.1| Rab GTPase [Dictyostelium discoideum AX4]
gi|122057917|sp|Q559X6.1|RAB2B_DICDI RecName: Full=Ras-related protein Rab-2B
gi|60473275|gb|EAL71221.1| Rab GTPase [Dictyostelium discoideum AX4]
Length = 202
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/132 (37%), Positives = 71/132 (53%), Gaps = 3/132 (2%)
Query: 72 EEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVE--NECGE 129
++++L +WDTAGQE+F +IT+AYYRGA +I + RDSFE+ +SW + C +
Sbjct: 71 KQIKLQIWDTAGQEKFRSITRAYYRGAVCAMIVYDITRRDSFESLNSWLTDCRKFSSC-D 129
Query: 130 IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSEL 189
+ TVL+ NK DL V+ EA + G TS K +NV+ F T + L +L
Sbjct: 130 VTTVLIGNKADLEANRQVSTSEAKEFAEKNGLMFFETSAKTALNVDEAFEKSTEQILKKL 189
Query: 190 RQQEEEYSINGN 201
S GN
Sbjct: 190 ESNPGLLSNEGN 201
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 37/48 (77%)
Query: 9 EEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
++++L +WDTAGQE+F +IT+AYYRGA +I + RDSFE+ +SW
Sbjct: 71 KQIKLQIWDTAGQEKFRSITRAYYRGAVCAMIVYDITRRDSFESLNSW 118
>gi|327290399|ref|XP_003229910.1| PREDICTED: ras-related protein Rab-10-like, partial [Anolis
carolinensis]
Length = 193
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 65/120 (54%), Gaps = 1/120 (0%)
Query: 68 ECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENEC 127
E +G++++L +WDTAGQE F IT +YYRGA ++ + + SFE W ++
Sbjct: 72 ELQGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNAKSFENISKWLRNIDEHA 131
Query: 128 GE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCL 186
E + +L+ NK D+ D+ VV + + ++R G R TS K +IN+ F L L
Sbjct: 132 NEDVERMLLGNKCDMDDKRVVPKAKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDIL 191
>gi|301100814|ref|XP_002899496.1| Rab18 family GTPase, putative [Phytophthora infestans T30-4]
gi|262103804|gb|EEY61856.1| Rab18 family GTPase, putative [Phytophthora infestans T30-4]
Length = 202
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 85/157 (54%), Gaps = 9/157 (5%)
Query: 34 GAQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKA 93
G + ++ F+ D+F+ + V K + + +G+++++ +WDTAGQE F +T +
Sbjct: 19 GKSSMLLRFTD---DTFDDNLQSTIGVDFKVKMMQVDGKKIKMTIWDTAGQERFRTLTSS 75
Query: 94 YYRGAQACVITFSTIDRDSFEAAHSWKMKVE--NECG--EIPTVLVQNKIDLLDQSVVAP 149
YYRGAQ V+ + RD+FE W +VE + G ++ +LV NKID + VV+
Sbjct: 76 YYRGAQGIVLVYDVARRDTFENLDLWLQEVEVYSPAGGRDVVKLLVGNKID--KERVVSR 133
Query: 150 EEADLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCL 186
EA+ +R+ G + +S K I + +F + K L
Sbjct: 134 REAEDWARSKGMLFVESSAKTKIGIQQVFNEVVQKIL 170
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 37/57 (64%)
Query: 6 CEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVSI 62
+G+++++ +WDTAGQE F +T +YYRGAQ V+ + RD+FE W +V +
Sbjct: 51 VDGKKIKMTIWDTAGQERFRTLTSSYYRGAQGIVLVYDVARRDTFENLDLWLQEVEV 107
>gi|166235969|gb|ABY85791.1| GTPase Rab1 [Larix kaempferi]
Length = 203
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 80/165 (48%), Gaps = 8/165 (4%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
DS+ ++ + V K E +G+ ++L +WDTAGQE F IT +YYRGA +I +
Sbjct: 31 DSYVDSYISTIGVDFKIRTIELDGKAIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDV 90
Query: 108 IDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
D DSF W +++ + + +LV NK D+ ++ VV + A + LG + T
Sbjct: 91 TDMDSFNNVKQWLSEIDKYASDSVSKLLVGNKCDMTEKRVVDQQMAKSFADELGIPFLET 150
Query: 167 SVKEDINVNSIFRYLTTKC-------LSELRQQEEEYSINGNGLP 204
S K+ NV F + + L+E ++ + G LP
Sbjct: 151 SAKDASNVEQAFLTMAGEVKRRMASQLTEGNRKANTIEMKGQPLP 195
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 31/50 (62%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
+G+ ++L +WDTAGQE F IT +YYRGA +I + D DSF W
Sbjct: 53 DGKAIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDMDSFNNVKQW 102
>gi|426387223|ref|XP_004060073.1| PREDICTED: ras-related protein Rab-3D [Gorilla gorilla gorilla]
Length = 219
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 68/135 (50%), Gaps = 1/135 (0%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
DSF A + + K + ++L +WDTAGQE + IT AYYRGA ++ +
Sbjct: 45 DSFTPAFVSTVGIDFKVKTVYRHDKRIKLQIWDTAGQERYRTITTAYYRGAMGFLLMYDV 104
Query: 108 IDRDSFEAAHSWKMKVENEC-GEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
+++SF A W +++ +LV NK DL D+ VV E+ L+ LG
Sbjct: 105 ANQESFAAVQDWATQIKTYSWDNAQVILVGNKCDLEDERVVPAEDGRRLADDLGFEFFEA 164
Query: 167 SVKEDINVNSIFRYL 181
S KE+INV +F L
Sbjct: 165 SAKENINVKQVFERL 179
>gi|395510325|ref|XP_003759428.1| PREDICTED: ras-related protein Rab-3C [Sarcophilus harrisii]
Length = 227
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 72/136 (52%), Gaps = 3/136 (2%)
Query: 48 DSFEAAHSWKMKVSIK-RTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFS 106
DSF +A + + K +T+ + E + ++L +WDTAGQE + IT AYYRGA ++ +
Sbjct: 53 DSFTSAFVSTVGIDFKVKTVFKNE-KRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYD 111
Query: 107 TIDRDSFEAAHSWKMKVENEC-GEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMR 165
+ +SF A W +++ +LV NK D+ D+ V++ E L LG
Sbjct: 112 ITNEESFNAVQDWSTQIKTYSWDNAQVILVGNKCDMEDERVISTERGKHLGEQLGFEFFE 171
Query: 166 TSVKEDINVNSIFRYL 181
TS K++INV F L
Sbjct: 172 TSAKDNINVKQTFERL 187
>gi|401825835|ref|XP_003887012.1| Rab GTPase [Encephalitozoon hellem ATCC 50504]
gi|392998169|gb|AFM98031.1| Rab GTPase [Encephalitozoon hellem ATCC 50504]
Length = 202
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 82/161 (50%), Gaps = 6/161 (3%)
Query: 35 AQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAY 94
+ C++ T + SF + + + IK E EGE+V+L +WDTAGQE F AI Y
Sbjct: 20 GKTCLMKRYTDETYSFTQSSTIGVDFKIKSL--EAEGEKVKLQIWDTAGQERFRAIISNY 77
Query: 95 YRGAQACVITFSTIDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEAD 153
YRGA +I F ++SF+ W +V E + +++ NK+D ++ VV EE +
Sbjct: 78 YRGAHGIIIVFDMGSKESFDNLGDWLGEVRKNTNENVEMIILGNKVDDKEKIVVTEEEVE 137
Query: 154 LLSRALG---CRLMRTSVKEDINVNSIFRYLTTKCLSELRQ 191
G TS K++I VN F YLT + + + ++
Sbjct: 138 KFLNENGIEKSSFYMTSAKDNICVNDSFEYLTRRLIDKHKK 178
Score = 60.1 bits (144), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 32/50 (64%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
EGE+V+L +WDTAGQE F AI YYRGA +I F ++SF+ W
Sbjct: 53 EGEKVKLQIWDTAGQERFRAIISNYYRGAHGIIIVFDMGSKESFDNLGDW 102
>gi|159478503|ref|XP_001697342.1| small rab-related GTPase [Chlamydomonas reinhardtii]
gi|158274500|gb|EDP00282.1| small rab-related GTPase [Chlamydomonas reinhardtii]
Length = 202
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/157 (35%), Positives = 76/157 (48%), Gaps = 9/157 (5%)
Query: 35 AQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAY 94
++C++T T SFE + + V K E EG+ +L +WDTAGQE F +T +Y
Sbjct: 20 GKSCILTRFT--SGSFEENTTSTIGVDFKVKYLEAEGKRCKLTVWDTAGQERFRTLTSSY 77
Query: 95 YRGAQACVITFSTIDRDSFEAAHS-----WKMKVENECGEIPTVLVQNKIDLLDQSVVAP 149
YRGAQ + + R++FEA W M E G I V V NK DL VA
Sbjct: 78 YRGAQGIIFVYDVTRRETFEALEGAWMREWDMYSTVE-GAIQMV-VANKTDLDSARQVAT 135
Query: 150 EEADLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCL 186
+E +R GC + TS K ++ V F L K L
Sbjct: 136 QEGHDFARRHGCLFVETSAKGNVAVGQAFEELLAKIL 172
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 38/66 (57%), Gaps = 5/66 (7%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHS-----WKMKVS 61
EG+ +L +WDTAGQE F +T +YYRGAQ + + R++FEA W M +
Sbjct: 53 EGKRCKLTVWDTAGQERFRTLTSSYYRGAQGIIFVYDVTRRETFEALEGAWMREWDMYST 112
Query: 62 IKRTIK 67
++ I+
Sbjct: 113 VEGAIQ 118
>gi|431918473|gb|ELK17694.1| Ras-related protein Rab-3C [Pteropus alecto]
Length = 219
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 72/136 (52%), Gaps = 3/136 (2%)
Query: 48 DSFEAAHSWKMKVSIK-RTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFS 106
DSF +A + + K +T+ + E + ++L +WDTAGQE + IT AYYRGA ++ +
Sbjct: 45 DSFTSAFVSTVGIDFKVKTVFKNE-KRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYD 103
Query: 107 TIDRDSFEAAHSWKMKVENEC-GEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMR 165
+ +SF A W +++ +LV NK D+ D+ V++ E L LG
Sbjct: 104 ITNEESFNAVQDWSTQIKTYSWDNAQVILVGNKCDMEDERVISTERGQHLGEQLGFEFFE 163
Query: 166 TSVKEDINVNSIFRYL 181
TS K++INV F L
Sbjct: 164 TSAKDNINVKQTFERL 179
>gi|392567328|gb|EIW60503.1| GTP-binding protein ypt1 [Trametes versicolor FP-101664 SS1]
Length = 204
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 66/132 (50%), Gaps = 1/132 (0%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
D++ ++ + V K E EG+ V+L +WDTAGQE F IT +YYRGA ++ +
Sbjct: 32 DTYTESYISTIGVDFKIRTIELEGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDV 91
Query: 108 IDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
D D+F W +++ E + +LV NK DL + VV A + LG + T
Sbjct: 92 TDNDTFTNVKQWLQEIDRYASEGVNKLLVGNKSDLTSKKVVEYSVAKEFADQLGIPFLET 151
Query: 167 SVKEDINVNSIF 178
S K NV F
Sbjct: 152 SAKNATNVEQAF 163
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 31/50 (62%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
EG+ V+L +WDTAGQE F IT +YYRGA ++ + D D+F W
Sbjct: 54 EGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDNDTFTNVKQW 103
>gi|123454687|ref|XP_001315095.1| small GTP-binding protein [Trichomonas vaginalis G3]
gi|121897761|gb|EAY02872.1| small GTP-binding protein, putative [Trichomonas vaginalis G3]
Length = 200
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 66/113 (58%), Gaps = 1/113 (0%)
Query: 75 RLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGEIPTV- 133
RL LWDTAGQE F ++ Y+R A +I ++ D+ SFE A W +E+EC IP +
Sbjct: 61 RLHLWDTAGQERFRSLAPMYFRDANVALIVYAVNDQKSFEDASGWYDCMESECQTIPYLY 120
Query: 134 LVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCL 186
L+ NKIDL ++ V+ ++ L+ +G + S KE NV+ +F+ + C+
Sbjct: 121 LIGNKIDLENERNVSHDDGLSLAEKIGAQFFEVSAKEGTNVDELFQNIAEACI 173
Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 28/45 (62%)
Query: 12 RLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
RL LWDTAGQE F ++ Y+R A +I ++ D+ SFE A W
Sbjct: 61 RLHLWDTAGQERFRSLAPMYFRDANVALIVYAVNDQKSFEDASGW 105
>gi|410948619|ref|XP_003981028.1| PREDICTED: ras-related protein Rab-3C [Felis catus]
Length = 227
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 72/136 (52%), Gaps = 3/136 (2%)
Query: 48 DSFEAAHSWKMKVSIK-RTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFS 106
DSF +A + + K +T+ + E + ++L +WDTAGQE + IT AYYRGA ++ +
Sbjct: 53 DSFTSAFVSTVGIDFKVKTVFKNE-KRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYD 111
Query: 107 TIDRDSFEAAHSWKMKVENEC-GEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMR 165
+ +SF A W +++ +LV NK D+ D+ V++ E L LG
Sbjct: 112 ITNEESFNAVQDWSTQIKTYSWDNAQVILVGNKCDMEDERVISTERGQHLGEQLGFEFFE 171
Query: 166 TSVKEDINVNSIFRYL 181
TS K++INV F L
Sbjct: 172 TSAKDNINVKQTFERL 187
>gi|350594330|ref|XP_003483878.1| PREDICTED: ras-related protein Rab-3C-like isoform 2 [Sus scrofa]
Length = 227
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 72/136 (52%), Gaps = 3/136 (2%)
Query: 48 DSFEAAHSWKMKVSIK-RTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFS 106
DSF +A + + K +T+ + E + ++L +WDTAGQE + IT AYYRGA ++ +
Sbjct: 53 DSFTSAFVSTVGIDFKVKTVFKNE-KRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYD 111
Query: 107 TIDRDSFEAAHSWKMKVENEC-GEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMR 165
+ +SF A W +++ +LV NK D+ D+ V++ E L LG
Sbjct: 112 ITNEESFNAVQDWSTQIKTYSWDNAQVILVGNKCDMEDERVISTERGQHLGEQLGFEFFE 171
Query: 166 TSVKEDINVNSIFRYL 181
TS K++INV F L
Sbjct: 172 TSAKDNINVKQTFERL 187
>gi|125858678|gb|AAI29779.1| LOC100037230 protein [Xenopus laevis]
Length = 205
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 86/156 (55%), Gaps = 3/156 (1%)
Query: 48 DSFEAAHSWKMKVSIK-RTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFS 106
D+F + + + K RTI E +G+ ++L +WDTAGQE F IT AYYRGA ++ +
Sbjct: 29 DAFNSTFISTIGIDFKIRTI-ELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYD 87
Query: 107 TIDRDSFEAAHSWKMKV-ENECGEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMR 165
+ SF+ +W + E+ ++ +++ NK D+ ++ V+ E+ + L+ G + M
Sbjct: 88 ITNEKSFDNIKNWIRNIEEHASSDVEKMVLGNKCDVNEKRQVSKEKGEKLALEYGIKFME 147
Query: 166 TSVKEDINVNSIFRYLTTKCLSELRQQEEEYSINGN 201
TS K +INV + F L +++ ++ E S G+
Sbjct: 148 TSAKANINVENAFFTLARDIKAKMDKRMEGNSPQGS 183
>gi|114052949|ref|NP_001040071.1| ras-related protein Rab-3C [Bos taurus]
gi|149732720|ref|XP_001495120.1| PREDICTED: ras-related protein Rab-3C-like [Equus caballus]
gi|426246459|ref|XP_004017011.1| PREDICTED: ras-related protein Rab-3C [Ovis aries]
gi|108935883|sp|P10949.3|RAB3C_BOVIN RecName: Full=Ras-related protein Rab-3C; AltName: Full=SMG P25C
gi|86438380|gb|AAI12796.1| RAB3C, member RAS oncogene family [Bos taurus]
gi|296475826|tpg|DAA17941.1| TPA: RAB3C, member RAS oncogene family [Bos taurus]
Length = 227
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 72/136 (52%), Gaps = 3/136 (2%)
Query: 48 DSFEAAHSWKMKVSIK-RTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFS 106
DSF +A + + K +T+ + E + ++L +WDTAGQE + IT AYYRGA ++ +
Sbjct: 53 DSFTSAFVSTVGIDFKVKTVFKNE-KRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYD 111
Query: 107 TIDRDSFEAAHSWKMKVENEC-GEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMR 165
+ +SF A W +++ +LV NK D+ D+ V++ E L LG
Sbjct: 112 ITNEESFNAVQDWSTQIKTYSWDNAQVILVGNKCDMEDERVISTERGQHLGEQLGFEFFE 171
Query: 166 TSVKEDINVNSIFRYL 181
TS K++INV F L
Sbjct: 172 TSAKDNINVKQTFERL 187
>gi|449431876|ref|XP_004133726.1| PREDICTED: ras-related protein RABD1-like isoform 2 [Cucumis
sativus]
Length = 201
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 77/155 (49%), Gaps = 1/155 (0%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
DS+ ++ + V K E +G+ ++L +WDTAGQE F IT +YYRGA +I +
Sbjct: 31 DSYVDSYISTIGVDFKIRTVELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDV 90
Query: 108 IDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
+ +SF W +++ + + +LV NK DL++ VV + A + LG + T
Sbjct: 91 TEMESFNNVKQWLNEIDRYANDSVCKLLVGNKCDLVENKVVDTQTAKAFADELGIPFLET 150
Query: 167 SVKEDINVNSIFRYLTTKCLSELRQQEEEYSINGN 201
S K+ NV F + + ++ Q +GN
Sbjct: 151 SAKDSTNVEQAFLTMAAEIKKKMGSQPTSSKSSGN 185
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 31/50 (62%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
+G+ ++L +WDTAGQE F IT +YYRGA +I + + +SF W
Sbjct: 53 DGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQW 102
>gi|348677906|gb|EGZ17723.1| hypothetical protein PHYSODRAFT_314944 [Phytophthora sojae]
Length = 202
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 85/157 (54%), Gaps = 9/157 (5%)
Query: 34 GAQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKA 93
G + ++ F+ D+F+ + V K + + +G+++++ +WDTAGQE F +T +
Sbjct: 19 GKSSMLLRFTD---DTFDDNLQSTIGVDFKVKMMQVDGKKIKMTIWDTAGQERFRTLTSS 75
Query: 94 YYRGAQACVITFSTIDRDSFEAAHSWKMKVE--NECG--EIPTVLVQNKIDLLDQSVVAP 149
YYRGAQ V+ + RD+FE W +VE + G ++ +LV NKID + VV+
Sbjct: 76 YYRGAQGIVLVYDVARRDTFENLDLWLQEVEVYSPAGGRDVVKLLVGNKID--KERVVSR 133
Query: 150 EEADLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCL 186
EA+ +R+ G + +S K I + +F + K L
Sbjct: 134 REAEDWARSKGMLFVESSAKTKIGIQQVFNEVVQKIL 170
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 37/57 (64%)
Query: 6 CEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVSI 62
+G+++++ +WDTAGQE F +T +YYRGAQ V+ + RD+FE W +V +
Sbjct: 51 VDGKKIKMTIWDTAGQERFRTLTSSYYRGAQGIVLVYDVARRDTFENLDLWLQEVEV 107
>gi|410900346|ref|XP_003963657.1| PREDICTED: ras-related protein Rab-1A-like isoform 1 [Takifugu
rubripes]
gi|312987462|gb|ADR31264.1| Rab1 [Sciaenops ocellatus]
Length = 203
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 79/159 (49%), Gaps = 5/159 (3%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
D++ ++ + V K E +G+ ++L +WDTAGQE F IT +YYRGA ++ +
Sbjct: 31 DTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDV 90
Query: 108 IDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
D++SF W +++ E + +LV NK DL + VV A + +LG + T
Sbjct: 91 TDQESFNNVKQWLQEIDRYASENVNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLET 150
Query: 167 SVKEDINVNSIFRYLTTKCLSELRQQEEEYSINGNGLPP 205
S K NV F + +E++++ + G G P
Sbjct: 151 SAKNATNVEQAFMTMA----AEIKKRMGPGATAGGGEKP 185
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 32/50 (64%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
+G+ ++L +WDTAGQE F IT +YYRGA ++ + D++SF W
Sbjct: 53 DGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQW 102
>gi|291220707|ref|XP_002730366.1| PREDICTED: RAB10, member RAS oncogene family-like [Saccoglossus
kowalevskii]
Length = 200
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 79/161 (49%), Gaps = 2/161 (1%)
Query: 34 GAQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKA 93
G I F D D+F + + K E +G++++L +WDTAGQE F IT +
Sbjct: 19 GVGKTCILFRFSD-DAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQERFHTITTS 77
Query: 94 YYRGAQACVITFSTIDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEA 152
YYRGA ++ + +F+ W ++ E + +L+ NK D+ D+ ++ E
Sbjct: 78 YYRGAMGIMLVYDITQPKTFDNITKWLRNIDEHANEDVERMLLGNKCDMEDKRMIPKERG 137
Query: 153 DLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSELRQQE 193
+ ++R G + + TS K ++NV F L L + Q++
Sbjct: 138 ESIAREHGIKFLETSAKSNVNVEKAFMTLAEDILRKTPQKD 178
>gi|89258421|gb|ABD65434.1| Rab10 [Suberites domuncula]
Length = 208
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 83/165 (50%), Gaps = 3/165 (1%)
Query: 35 AQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAY 94
+ CV+ F D D+F + + K E EG+ ++L +WDTAGQE F IT +Y
Sbjct: 26 GKTCVL-FRYAD-DTFNTTFISTIGIDFKIKTIELEGKRIKLQIWDTAGQERFHTITTSY 83
Query: 95 YRGAQACVITFSTIDRDSFEAAHSWKMKVE-NECGEIPTVLVQNKIDLLDQSVVAPEEAD 153
YRGA ++ + ++ SF+ W +E + ++ +L+ NK D + VV + +
Sbjct: 84 YRGAMGIILVYDITNQKSFDNITKWLQNIEMHASADVERILIGNKCDWEARRVVPKDRGN 143
Query: 154 LLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSELRQQEEEYSI 198
L+ G + TS K + N+ F L + L ++ ++E+ ++
Sbjct: 144 ALAHNQGISFLETSAKTNYNIEEAFEQLAKQILRKVPAKKEDETV 188
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 32/50 (64%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
EG+ ++L +WDTAGQE F IT +YYRGA ++ + ++ SF+ W
Sbjct: 59 EGKRIKLQIWDTAGQERFHTITTSYYRGAMGIILVYDITNQKSFDNITKW 108
>gi|402890290|ref|XP_003908421.1| PREDICTED: ras-related protein Rab-10 [Papio anubis]
Length = 179
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 68/127 (53%), Gaps = 1/127 (0%)
Query: 68 ECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVENEC 127
E +G++++L +WDTAGQE F IT +YYRGA ++ + + SFE W ++
Sbjct: 31 ELQGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHA 90
Query: 128 GE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRTSVKEDINVNSIFRYLTTKCL 186
E + +L+ NK D+ D+ VV + + ++R G R TS K +IN+ F L L
Sbjct: 91 NEDVERMLLGNKCDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDIL 150
Query: 187 SELRQQE 193
+ +E
Sbjct: 151 RKTPVKE 157
>gi|226479810|emb|CAX73201.1| RAB2, member RAS oncogene family [Schistosoma japonicum]
Length = 213
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 88/177 (49%), Gaps = 9/177 (5%)
Query: 35 AQACVITFSTIDRDSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAY 94
++C++ T R F+ H + V + +G++V+L +WDTAGQE F +IT++Y
Sbjct: 18 GKSCLLLQFTDKR--FQPVHDLTIGVEFGARLINIDGKQVKLQIWDTAGQESFRSITRSY 75
Query: 95 YRGAQACVITFSTIDRDSFEAAHSWKMKV-ENECGEIPTVLVQNKIDLLDQSVVAPEEAD 153
YRGA ++ + RD+F +W ++ + +L+ NK DL + V EE +
Sbjct: 76 YRGAAGALLVYDITRRDTFTHLTTWLEDARQHSSSNMVIMLIGNKSDLESRRDVQKEEGE 135
Query: 154 LLSRALGCRLMRTSVKEDINVNSIFRYLTTKCLSELRQQEEEYSIN--GNG--LPPY 206
+R G M TS K NV F T KC+ + + QE +N NG L P+
Sbjct: 136 AFAREHGLVFMETSAKTAANVEDAF-INTAKCIHD-KIQEGALDVNNEANGIKLGPH 190
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 35/50 (70%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
+G++V+L +WDTAGQE F +IT++YYRGA ++ + RD+F +W
Sbjct: 51 DGKQVKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFTHLTTW 100
>gi|302563381|ref|NP_001181198.1| ras-related protein Rab-3D [Macaca mulatta]
gi|332253338|ref|XP_003275802.1| PREDICTED: ras-related protein Rab-3D [Nomascus leucogenys]
gi|402904261|ref|XP_003914965.1| PREDICTED: ras-related protein Rab-3D [Papio anubis]
gi|380786233|gb|AFE64992.1| ras-related protein Rab-3D [Macaca mulatta]
gi|383414467|gb|AFH30447.1| ras-related protein Rab-3D [Macaca mulatta]
gi|384944474|gb|AFI35842.1| ras-related protein Rab-3D [Macaca mulatta]
Length = 219
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 68/135 (50%), Gaps = 1/135 (0%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
DSF A + + K + ++L +WDTAGQE + IT AYYRGA ++ +
Sbjct: 45 DSFTPAFVSTVGIDFKVKTVYRHDKRIKLQIWDTAGQERYRTITTAYYRGAMGFLLMYDV 104
Query: 108 IDRDSFEAAHSWKMKVENEC-GEIPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
+++SF A W +++ +LV NK DL D+ VV E+ L+ LG
Sbjct: 105 ANQESFAAVQDWATQIKTYSWDNAQVILVGNKCDLEDERVVPAEDGRRLADDLGFEFFEA 164
Query: 167 SVKEDINVNSIFRYL 181
S KE+INV +F L
Sbjct: 165 SAKENINVKQVFERL 179
>gi|170049010|ref|XP_001853751.1| GTP-binding protein Rab-3D [Culex quinquefasciatus]
gi|167870968|gb|EDS34351.1| GTP-binding protein Rab-3D [Culex quinquefasciatus]
Length = 219
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 71/135 (52%), Gaps = 1/135 (0%)
Query: 48 DSFEAAHSWKMKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFST 107
DSF +A + + K + V+L +WDTAGQE + IT AYYRGA ++ +
Sbjct: 43 DSFTSAFVSTVGIDFKVKTVFRHDKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDI 102
Query: 108 IDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMRT 166
+ +SF + W +++ + +LV NK D+ D+ V++ E L+ LG T
Sbjct: 103 TNEESFNSVQDWVTQIKTYSWDNAQVILVGNKCDMEDERVISFERGKQLADQLGVEFFET 162
Query: 167 SVKEDINVNSIFRYL 181
S KE++NV ++F L
Sbjct: 163 SAKENVNVKNVFERL 177
>gi|156383922|ref|XP_001633081.1| predicted protein [Nematostella vectensis]
gi|156220146|gb|EDO41018.1| predicted protein [Nematostella vectensis]
Length = 206
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 73/133 (54%), Gaps = 3/133 (2%)
Query: 48 DSFEAAHSWKMKVSIK-RTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFS 106
D+F + + + K RTI E +G++++L +WDTAGQE F IT AYYRGA ++ +
Sbjct: 31 DAFNSTFISTIGIDFKIRTI-ELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYD 89
Query: 107 TIDRDSFEAAHSWKMKVENECGE-IPTVLVQNKIDLLDQSVVAPEEADLLSRALGCRLMR 165
+ SFE +W +E + + +++ NK D+ D+ V+ E + L+ G + M
Sbjct: 90 ITNDKSFENIKNWIRNIEEHASQDVEKMVLGNKCDMEDRRQVSKERGEQLAVEYGIKFME 149
Query: 166 TSVKEDINVNSIF 178
TS K INV F
Sbjct: 150 TSAKASINVEEAF 162
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 54/97 (55%), Gaps = 9/97 (9%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSWKMKVSIKRTI 66
+G++++L +WDTAGQE F IT AYYRGA ++ + + SFE +W R I
Sbjct: 53 DGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNDKSFENIKNW------IRNI 106
Query: 67 KECEGEEV-RLMLWDTAGQEEFDAITKAYYRGAQACV 102
+E ++V +++L + E+ ++K RG Q V
Sbjct: 107 EEHASQDVEKMVLGNKCDMEDRRQVSKE--RGEQLAV 141
>gi|407044609|gb|EKE42710.1| Rab family GTPase [Entamoeba nuttalli P19]
Length = 206
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/126 (43%), Positives = 69/126 (54%), Gaps = 4/126 (3%)
Query: 58 MKVSIKRTIKECEGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAH 117
+ V K I +G+ V+L LWDTAGQE F IT +YYRG C+I + D SFE
Sbjct: 47 IGVDFKSRIINYQGKTVKLQLWDTAGQERFRNITSSYYRGTHGCLIVYDVTDITSFEKIT 106
Query: 118 SWKMKVENECGEIPTVL-VQNKIDLLDQSVVAPEEADLLSR-ALGCRLMRTSVKEDINVN 175
W ++ N+C P +L V NKID D +VV E A+ R + G R MR S K NV
Sbjct: 107 YWINEL-NDCSIKPEILVVGNKIDSED-AVVTSEIAEKFCRLSGGLRSMRCSAKTGENVE 164
Query: 176 SIFRYL 181
SIF L
Sbjct: 165 SIFNVL 170
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 31/50 (62%)
Query: 7 EGEEVRLMLWDTAGQEEFDAITKAYYRGAQACVITFSTIDRDSFEAAHSW 56
+G+ V+L LWDTAGQE F IT +YYRG C+I + D SFE W
Sbjct: 59 QGKTVKLQLWDTAGQERFRNITSSYYRGTHGCLIVYDVTDITSFEKITYW 108
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.319 0.132 0.393
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,047,630,616
Number of Sequences: 23463169
Number of extensions: 107572507
Number of successful extensions: 312165
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 15104
Number of HSP's successfully gapped in prelim test: 4523
Number of HSP's that attempted gapping in prelim test: 273108
Number of HSP's gapped (non-prelim): 38578
length of query: 208
length of database: 8,064,228,071
effective HSP length: 136
effective length of query: 72
effective length of database: 9,168,204,383
effective search space: 660110715576
effective search space used: 660110715576
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 73 (32.7 bits)