BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy2532
(410 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O35889|AFAD_RAT Afadin OS=Rattus norvegicus GN=Mllt4 PE=1 SV=1
Length = 1829
Score = 290 bits (741), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 142/262 (54%), Positives = 184/262 (70%), Gaps = 7/262 (2%)
Query: 40 NVLGVLMSAMALLRGCRLNAALTIQLFSKLFHFLNVWAFNRLVAN-NSIYCSKAWGVRIK 98
+VL L AM+LLR CR+NAALTIQLFS+LFHF+N+W FNRLV + +S CS WG I+
Sbjct: 768 DVLHTLTGAMSLLRRCRVNAALTIQLFSQLFHFINMWLFNRLVTDPDSGLCSHYWGAIIR 827
Query: 99 NRLAHIQMWAERQGLELAADCHLAKLMQAAHLLQAPKYTGDELAELTSTCFKLNSLQLRA 158
+L HI+ WAE+QGLELAADCHL++++QA LL KY D++ + STCFKLNSLQL+A
Sbjct: 828 QQLGHIEAWAEKQGLELAADCHLSRIVQATTLLTMDKYVPDDIPNINSTCFKLNSLQLQA 887
Query: 159 LLLKYQPTPDEPRLPHEVIENVVRVAENLADELARSDGRDVCLEEESELLLPFLLPDDGY 218
LL Y PDEP +P ++IENVV VAEN ADELARSDGRDV LEE+ +L LPFLLP+DGY
Sbjct: 888 LLQNYHCAPDEPFIPTDLIENVVAVAENTADELARSDGRDVQLEEDPDLQLPFLLPEDGY 947
Query: 219 SCEVVRGVPQGLIEFISPLQAAGLCRLSAQPTSNGYWTVYMGPHNSQGPVIRSPSAMSNR 278
SC+VVR +P GL EF+ PL G CRL S G WT+Y + + ++R + ++
Sbjct: 948 SCDVVRNIPNGLQEFLDPLCQRGFCRLVPHTRSPGTWTIYFEGADYESHLMRENTELTQ- 1006
Query: 279 SAGYIANREEPDIQVIKLHKSS 300
R+EP++ + L K +
Sbjct: 1007 -----PLRKEPEVITVTLKKQN 1023
Score = 77.0 bits (188), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 62/105 (59%), Gaps = 6/105 (5%)
Query: 293 VIKLHKSSTYERYTR------GTDPILPAVLEIREETEEAFLHALITDLEPSAPSFKLAP 346
+I+L + Y R G + +LPA +E RE +E++FL A+I S FKL+P
Sbjct: 575 MIRLDQEQDYRRRESRTQDAAGPELMLPASIEFRESSEDSFLSAIINYTNSSTVHFKLSP 634
Query: 347 AYTLYLAARYRASTHYRPELIPTERAHRLTLVLVRVAAMIHNVIE 391
Y LY+A RY S+ +RP++ PTER H+ V+ ++ +M+ VI+
Sbjct: 635 TYVLYMACRYVLSSQHRPDISPTERTHKAIAVVNKMVSMMEGVIQ 679
>sp|Q9QZQ1|AFAD_MOUSE Afadin OS=Mus musculus GN=Mllt4 PE=1 SV=3
Length = 1820
Score = 290 bits (741), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 143/262 (54%), Positives = 184/262 (70%), Gaps = 7/262 (2%)
Query: 40 NVLGVLMSAMALLRGCRLNAALTIQLFSKLFHFLNVWAFNRLVAN-NSIYCSKAWGVRIK 98
+VL L AM+LLR CR+NAALTIQLFS+LFHF+N+W FNRLV + +S CS WG I+
Sbjct: 761 DVLHTLTGAMSLLRRCRVNAALTIQLFSQLFHFINMWLFNRLVTDPDSGLCSHYWGAIIR 820
Query: 99 NRLAHIQMWAERQGLELAADCHLAKLMQAAHLLQAPKYTGDELAELTSTCFKLNSLQLRA 158
+L HI+ WAE+QGLELAADCHL++++QA LL KY D++ + STCFKLNSLQL+A
Sbjct: 821 QQLGHIEAWAEKQGLELAADCHLSRIVQATTLLTMDKYVPDDIPNINSTCFKLNSLQLQA 880
Query: 159 LLLKYQPTPDEPRLPHEVIENVVRVAENLADELARSDGRDVCLEEESELLLPFLLPDDGY 218
LL Y PDEP +P ++IENVV VAEN ADELARSDGRDV LEE+ +L LPFLLP+DGY
Sbjct: 881 LLQNYHCAPDEPFIPTDLIENVVAVAENTADELARSDGRDVQLEEDPDLQLPFLLPEDGY 940
Query: 219 SCEVVRGVPQGLIEFISPLQAAGLCRLSAQPTSNGYWTVYMGPHNSQGPVIRSPSAMSNR 278
SC+VVR +P GL EF+ PL G CRL S G WT+Y + + ++R + ++
Sbjct: 941 SCDVVRNIPNGLQEFLDPLCQRGFCRLVPHTRSPGTWTIYFEGADYESHLMRENAELAQ- 999
Query: 279 SAGYIANREEPDIQVIKLHKSS 300
R+EP+I + L K +
Sbjct: 1000 -----PLRKEPEIITVTLKKQN 1016
Score = 78.6 bits (192), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 62/105 (59%), Gaps = 6/105 (5%)
Query: 293 VIKLHKSSTYERYTR------GTDPILPAVLEIREETEEAFLHALITDLEPSAPSFKLAP 346
+I+L + Y R G + ILPA +E RE +E++FL A+I S FKL+P
Sbjct: 575 MIRLDQEQEYRRRENRTQDATGPELILPASIEFRESSEDSFLSAIINYTNSSTVHFKLSP 634
Query: 347 AYTLYLAARYRASTHYRPELIPTERAHRLTLVLVRVAAMIHNVIE 391
Y LY+A RY S+ +RP++ PTER H+ V+ ++ +M+ VI+
Sbjct: 635 TYVLYMACRYVLSSQHRPDISPTERTHKAIAVVNKMVSMMEGVIQ 679
>sp|P55196|AFAD_HUMAN Afadin OS=Homo sapiens GN=MLLT4 PE=1 SV=3
Length = 1824
Score = 288 bits (736), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 142/262 (54%), Positives = 184/262 (70%), Gaps = 7/262 (2%)
Query: 40 NVLGVLMSAMALLRGCRLNAALTIQLFSKLFHFLNVWAFNRLVAN-NSIYCSKAWGVRIK 98
+VL L AM+LLR CR+NAALTIQLFS+LFHF+N+W FNRLV + +S CS WG I+
Sbjct: 761 DVLHTLTGAMSLLRRCRVNAALTIQLFSQLFHFINMWLFNRLVTDPDSGLCSHYWGAIIR 820
Query: 99 NRLAHIQMWAERQGLELAADCHLAKLMQAAHLLQAPKYTGDELAELTSTCFKLNSLQLRA 158
+L HI+ WAE+QGLELAADCHL++++QA LL KY D++ + STCFKLNSLQL+A
Sbjct: 821 QQLGHIEAWAEKQGLELAADCHLSRIVQATTLLTMDKYAPDDIPNINSTCFKLNSLQLQA 880
Query: 159 LLLKYQPTPDEPRLPHEVIENVVRVAENLADELARSDGRDVCLEEESELLLPFLLPDDGY 218
LL Y PDEP +P ++IENVV VAEN ADELARSDGR+V LEE+ +L LPFLLP+DGY
Sbjct: 881 LLQNYHCAPDEPFIPTDLIENVVTVAENTADELARSDGREVQLEEDPDLQLPFLLPEDGY 940
Query: 219 SCEVVRGVPQGLIEFISPLQAAGLCRLSAQPTSNGYWTVYMGPHNSQGPVIRSPSAMSNR 278
SC+VVR +P GL EF+ PL G CRL S G WT+Y + + ++R + ++
Sbjct: 941 SCDVVRNIPNGLQEFLDPLCQRGFCRLIPHTRSPGTWTIYFEGADYESHLLRENTELAQ- 999
Query: 279 SAGYIANREEPDIQVIKLHKSS 300
R+EP+I + L K +
Sbjct: 1000 -----PLRKEPEIITVTLKKQN 1016
Score = 80.1 bits (196), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 62/105 (59%), Gaps = 6/105 (5%)
Query: 293 VIKLHKSSTYERY------TRGTDPILPAVLEIREETEEAFLHALITDLEPSAPSFKLAP 346
+I++ + Y R G + ILPA +E RE +E++FL A+I S FKL+P
Sbjct: 575 MIRVEQQPDYRRQESRTQDASGPELILPASIEFRESSEDSFLSAIINYTNSSTVHFKLSP 634
Query: 347 AYTLYLAARYRASTHYRPELIPTERAHRLTLVLVRVAAMIHNVIE 391
Y LY+A RY S YRP++ PTER H++ V+ ++ +M+ VI+
Sbjct: 635 TYVLYMACRYVLSNQYRPDISPTERTHKVIAVVNKMVSMMEGVIQ 679
>sp|P19524|MYO2_YEAST Myosin-2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=MYO2 PE=1 SV=1
Length = 1574
Score = 61.6 bits (148), Expect = 1e-08, Method: Composition-based stats.
Identities = 41/151 (27%), Positives = 73/151 (48%), Gaps = 6/151 (3%)
Query: 67 SKLFHFLNVWAFNRLVANNSIYCSKAWGVRIKNRLAHIQMWAERQGLELAADCHLAKLMQ 126
+ L ++++ FN L+ + + S G+++ + ++ W + GL +C L L+Q
Sbjct: 1384 TTLLNYVDAICFNELIMKRN-FLSWKRGLQLNYNVTRLEEWCKTHGLTDGTEC-LQHLIQ 1441
Query: 127 AAHLLQAPKYTGDELAELTSTCFKLNSLQLRALLLKYQPTPDEPRLPHEVIENVVRVAEN 186
A LLQ KYT +++ L C+ L QL+ L+ +YQ E +P E++ V + +
Sbjct: 1442 TAKLLQVRKYTIEDIDILRGICYSLTPAQLQKLISQYQVADYESPIPQEILRYVADIVKK 1501
Query: 187 LADELARSDGRDVCLEEESELLLPFLLPDDG 217
A S G D E S + F+ P+ G
Sbjct: 1502 EA--ALSSSGNDSKGHEHSSSI--FITPETG 1528
>sp|Q876G9|MYO2_SACBA Myosin-2 OS=Saccharomyces bayanus GN=MYO2 PE=3 SV=2
Length = 1568
Score = 58.9 bits (141), Expect = 6e-08, Method: Composition-based stats.
Identities = 33/122 (27%), Positives = 62/122 (50%), Gaps = 2/122 (1%)
Query: 67 SKLFHFLNVWAFNRLVANNSIYCSKAWGVRIKNRLAHIQMWAERQGLELAADCHLAKLMQ 126
+ L ++++ FN L+ + + S G+++ + ++ W + GL +C L L+Q
Sbjct: 1381 TTLLNYVDAICFNELIMKRN-FLSWKRGLQLNYNVTRLEEWCKTHGLTGGTEC-LQHLIQ 1438
Query: 127 AAHLLQAPKYTGDELAELTSTCFKLNSLQLRALLLKYQPTPDEPRLPHEVIENVVRVAEN 186
A LLQ KYT +++ L C+ L QL+ L+ +YQ E +P E++ V + +
Sbjct: 1439 TAKLLQVRKYTIEDIDILRGICYSLTPAQLQKLISQYQVADYESPIPQEILRYVADIVKK 1498
Query: 187 LA 188
A
Sbjct: 1499 EA 1500
>sp|P70569|MYO5B_RAT Unconventional myosin-Vb OS=Rattus norvegicus GN=Myo5b PE=1 SV=1
Length = 1846
Score = 50.8 bits (120), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 77/159 (48%), Gaps = 9/159 (5%)
Query: 57 LNAALTIQLFSKLFHFLNVWAFNRLVANNSIYCSKAWGVRIKNRLAHIQMWAERQGLELA 116
L+ + +Q+F +LF+ +N N L+ CS + G++++ ++ ++ W + L+ +
Sbjct: 1671 LDPEIILQVFKQLFYMINAVTLNNLLLRKDA-CSWSTGMQLRYNISQLEEWLRGKNLQQS 1729
Query: 117 ADCH-LAKLMQAAHLLQAPKYTGDELAELTSTCFKLNSLQLRALLLKYQPTPDEPRLPHE 175
+ L+QAA LLQ K T ++ + S C L++ Q+ +L Y P
Sbjct: 1730 GAVQTMEPLIQAAQLLQLKKKTQEDAEAICSLCTSLSTQQIVKILNLYTPLNG---FEER 1786
Query: 176 VIENVVRVAENLADELARSDGRDVCLEEESELLLPFLLP 214
V + +R + E RSD + + L +S+ + P L P
Sbjct: 1787 VTVSFIRTIQAQLQE--RSDPQQLLL--DSKHMFPVLFP 1821
>sp|Q9ULV0|MYO5B_HUMAN Unconventional myosin-Vb OS=Homo sapiens GN=MYO5B PE=1 SV=3
Length = 1848
Score = 50.1 bits (118), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 58/110 (52%), Gaps = 2/110 (1%)
Query: 57 LNAALTIQLFSKLFHFLNVWAFNRLVANNSIYCSKAWGVRIKNRLAHIQMWAERQGLELA 116
L+ + +Q+F +LF+ +N N L+ + CS + G++++ ++ ++ W + L +
Sbjct: 1673 LDPEIILQVFKQLFYMINAVTLNNLLLRKDV-CSWSTGMQLRYNISQLEEWLRGRNLHQS 1731
Query: 117 ADCH-LAKLMQAAHLLQAPKYTGDELAELTSTCFKLNSLQLRALLLKYQP 165
+ L+QAA LLQ K T ++ + S C L++ Q+ +L Y P
Sbjct: 1732 GAVQTMEPLIQAAQLLQLKKKTQEDAEAICSLCTSLSTQQIVKILNLYTP 1781
>sp|P21271|MYO5B_MOUSE Unconventional myosin-Vb OS=Mus musculus GN=Myo5b PE=2 SV=2
Length = 1818
Score = 48.9 bits (115), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 77/159 (48%), Gaps = 9/159 (5%)
Query: 57 LNAALTIQLFSKLFHFLNVWAFNRLVANNSIYCSKAWGVRIKNRLAHIQMWAERQGLELA 116
L+ + +Q+F +LF+ +N N L+ CS + G++++ ++ ++ W + L +
Sbjct: 1643 LDPEIILQVFKQLFYMINAVTLNNLLLRKDA-CSWSTGMQLRYNISQLEEWLRGKNLHQS 1701
Query: 117 ADCH-LAKLMQAAHLLQAPKYTGDELAELTSTCFKLNSLQLRALLLKYQPTPDEPRLPHE 175
+ L+QAA LLQ K T ++ + S C L++ Q+ +L Y P +
Sbjct: 1702 GAVQTMEPLIQAAQLLQLKKKTHEDAEAICSLCTSLSTQQIVKILNLYTPLNE---FEER 1758
Query: 176 VIENVVRVAENLADELARSDGRDVCLEEESELLLPFLLP 214
V + +R + E R+D + + L +S+ + P L P
Sbjct: 1759 VTVSFIRTIQAQLQE--RNDPQQLLL--DSKHVFPVLFP 1793
>sp|P54696|MYOH_DICDI Myosin-H heavy chain OS=Dictyostelium discoideum GN=myoH PE=4 SV=3
Length = 1771
Score = 47.4 bits (111), Expect = 2e-04, Method: Composition-based stats.
Identities = 37/146 (25%), Positives = 69/146 (47%), Gaps = 10/146 (6%)
Query: 52 LRGCRLNAALTIQLFSKLFHFLNVWAFNRLVANNSIYCSKAWGVRIKNRLAHIQMWAE-R 110
L C +N L LF +LF F+N FN ++ + C ++ + IK ++ ++ W +
Sbjct: 1557 LENCYINNNLCKLLFEQLFSFINAMIFNEILLRKDLCCLRS-SIPIKMNISELEHWVKLH 1615
Query: 111 QGLELAAD-CHLAKLMQAA---HLLQAPKYTGDELAELTSTCFKLNSLQLRALLLKYQPT 166
G E ++ C +L++ ++ + DEL + C L+ QL+ LL Y P
Sbjct: 1616 HGKEWSSSVCDKLRLLKEVVYILMIDKTQLQNDELRD--EICPTLSIAQLKQLLTMYSPD 1673
Query: 167 PD--EPRLPHEVIENVVRVAENLADE 190
D E +P E++ +++ + DE
Sbjct: 1674 VDSFEDPIPLEILTSLMDSPKYNPDE 1699
>sp|Q875X3|MYO2A_NAUCC Myosin-2A OS=Naumovozyma castellii (strain ATCC 76901 / CBS 4309 /
NBRC 1992 / NRRL Y-12630) GN=MYO2A PE=3 SV=2
Length = 1567
Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 60/117 (51%), Gaps = 2/117 (1%)
Query: 69 LFHFLNVWAFNRLVANNSIYCSKAWGVRIKNRLAHIQMWAERQGLELAADCHLAKLMQAA 128
L ++++ FN L+ + + S G+++ + ++ W + GL A +L L+Q A
Sbjct: 1390 LLNYVDTICFNDLIMKRN-FLSWKRGLQLNYNVTRLEEWCKTHGLPDGAQ-YLQHLIQTA 1447
Query: 129 HLLQAPKYTGDELAELTSTCFKLNSLQLRALLLKYQPTPDEPRLPHEVIENVVRVAE 185
LLQ KYT +++ + C L+ QL+ L+ +Y E +P ++++ V + +
Sbjct: 1448 KLLQLRKYTIEDIDMVRGICSSLSPAQLQKLISQYHVADYESPIPQDILKYVADIVK 1504
>sp|Q9Y4I1|MYO5A_HUMAN Unconventional myosin-Va OS=Homo sapiens GN=MYO5A PE=1 SV=2
Length = 1855
Score = 46.6 bits (109), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 54/110 (49%), Gaps = 2/110 (1%)
Query: 57 LNAALTIQLFSKLFHFLNVWAFNRLVANNSIYCSKAWGVRIKNRLAHIQMWAERQGL-EL 115
++ L Q+ ++F+ + N L+ + CS + G++I+ ++ ++ W + L
Sbjct: 1680 MDPELIKQVVKQMFYIIGAITLNNLLLRKDM-CSWSKGMQIRYNVSQLEEWLRDKNLMNS 1738
Query: 116 AADCHLAKLMQAAHLLQAPKYTGDELAELTSTCFKLNSLQLRALLLKYQP 165
A L L+QAA LLQ K T D+ + S C L + Q+ +L Y P
Sbjct: 1739 GAKETLEPLIQAAQLLQVKKKTDDDAEAICSMCNALTTAQIVKVLNLYTP 1788
>sp|Q99104|MYO5A_MOUSE Unconventional myosin-Va OS=Mus musculus GN=Myo5a PE=1 SV=2
Length = 1853
Score = 46.6 bits (109), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 54/110 (49%), Gaps = 2/110 (1%)
Query: 57 LNAALTIQLFSKLFHFLNVWAFNRLVANNSIYCSKAWGVRIKNRLAHIQMWAERQGL-EL 115
++ L Q+ ++F+ + N L+ + CS + G++I+ ++ ++ W + L
Sbjct: 1678 MDPELIKQVVKQMFYIVGAITLNNLLLRKDM-CSWSKGMQIRYNVSQLEEWLRDKNLMNS 1736
Query: 116 AADCHLAKLMQAAHLLQAPKYTGDELAELTSTCFKLNSLQLRALLLKYQP 165
A L L+QAA LLQ K T D+ + S C L + Q+ +L Y P
Sbjct: 1737 GAKETLEPLIQAAQLLQVKKKTDDDAEAICSMCNALTTAQIVKVLNLYTP 1786
>sp|Q9QYF3|MYO5A_RAT Unconventional myosin-Va OS=Rattus norvegicus GN=Myo5a PE=1 SV=1
Length = 1828
Score = 46.2 bits (108), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 54/110 (49%), Gaps = 2/110 (1%)
Query: 57 LNAALTIQLFSKLFHFLNVWAFNRLVANNSIYCSKAWGVRIKNRLAHIQMWAERQGL-EL 115
++ L Q+ ++F+ + N L+ + CS + G++I+ ++ ++ W + L
Sbjct: 1653 MDPELIKQVVKQMFYIVGAITLNNLLLRKDM-CSWSKGMQIRYNVSQLEEWLRDKNLMNS 1711
Query: 116 AADCHLAKLMQAAHLLQAPKYTGDELAELTSTCFKLNSLQLRALLLKYQP 165
A L L+QAA LLQ K T D+ + S C L + Q+ +L Y P
Sbjct: 1712 GAKETLEPLIQAAQLLQVKKKTDDDAEAICSMCNALTTAQIVKVLNLYTP 1761
>sp|Q69Z89|RADIL_MOUSE Ras-associating and dilute domain-containing protein OS=Mus
musculus GN=Radil PE=1 SV=2
Length = 1099
Score = 46.2 bits (108), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 56/128 (43%), Gaps = 4/128 (3%)
Query: 41 VLGVLMSAMALLRGCRLNAALTIQLFSKLFHFLNVWAFNRLVANNSIYCSKAW--GVRIK 98
V+ V + + LL+ +++ + Q+ + LF F N+++ W GV++
Sbjct: 640 VVSVFQATLDLLQQLQMHPEVASQMLAYLFFFSGTLLLNQVLDKGPSLSCFHWPRGVQVC 699
Query: 99 NRLAHIQMWAERQGLELAADCHLAKLMQAAHLLQAPKYTGDEL--AELTSTCFKLNSLQL 156
RL WA GL A+ KL HLL P+ ++ A L T LN QL
Sbjct: 700 ARLQQFLEWARSAGLGAPAERFFRKLSCTLHLLATPRAQLIQMSWATLRVTFPALNPAQL 759
Query: 157 RALLLKYQ 164
LL +YQ
Sbjct: 760 HRLLTQYQ 767
Score = 32.3 bits (72), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 9/62 (14%)
Query: 311 PILPA--------VLEIREETEEAFLHALITDLEPSAPSFKLAPAYTLYLAARYRASTHY 362
P LPA +LE + E+ L ++T +EP KL PA+ L L ++ A H+
Sbjct: 421 PSLPAAVVRRRSLLLEFEPDVEDTLLQRIMTLIEPGGDDHKLTPAFLLCLCIQHSA-MHF 479
Query: 363 RP 364
+P
Sbjct: 480 QP 481
>sp|Q9NQX4|MYO5C_HUMAN Unconventional myosin-Vc OS=Homo sapiens GN=MYO5C PE=1 SV=2
Length = 1742
Score = 45.4 bits (106), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 73/158 (46%), Gaps = 9/158 (5%)
Query: 57 LNAALTIQLFSKLFHFLNVWAFNRLVANNSIYCSKAWGVRIKNRLAHIQMWAERQGLELA 116
L+ L Q +LF + N L + CS G++I+ +++++ W + + L+ +
Sbjct: 1567 LDPELVRQAVKQLFFLIGAVTLNSLFLRKDM-CSCRKGMQIRCNISYLEEWLKDKNLQNS 1625
Query: 117 -ADCHLAKLMQAAHLLQAPKYTGDELAELTSTCFKLNSLQLRALLLKYQPTPDEPRLPHE 175
A L L QAA LLQ K T + E+ C L+++Q+ +L Y P D
Sbjct: 1626 LAKETLEPLSQAAWLLQVKKTTDSDAKEIYERCTSLSAVQIIKILNSYTPIDD---FEKR 1682
Query: 176 VIENVVRVAENLADELARSDGRDVCLEEES--ELLLPF 211
V + VR + L + +R D + L+ + ++ PF
Sbjct: 1683 VTPSFVRKVQALLN--SREDSSQLMLDTKYLFQVTFPF 1718
>sp|Q02440|MYO5A_CHICK Unconventional myosin-Va OS=Gallus gallus GN=MYO5A PE=1 SV=1
Length = 1829
Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 54/110 (49%), Gaps = 2/110 (1%)
Query: 57 LNAALTIQLFSKLFHFLNVWAFNRLVANNSIYCSKAWGVRIKNRLAHIQMWAERQGL-EL 115
++ L Q+ ++F+ + N L+ + CS + G++I+ ++ ++ W + L
Sbjct: 1654 MDPELIKQVVKQMFYIIGAVTLNNLLLRKDM-CSWSKGMQIRYNVSQLEEWLRDKNLMNS 1712
Query: 116 AADCHLAKLMQAAHLLQAPKYTGDELAELTSTCFKLNSLQLRALLLKYQP 165
A L L+QAA LLQ K T ++ + S C L + Q+ +L Y P
Sbjct: 1713 GAKETLEPLIQAAQLLQVKKKTDEDAEAICSMCNALTTAQIVKVLNLYTP 1762
>sp|P32492|MYO4_YEAST Myosin-4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=MYO4 PE=1 SV=1
Length = 1471
Score = 44.7 bits (104), Expect = 0.001, Method: Composition-based stats.
Identities = 35/133 (26%), Positives = 67/133 (50%), Gaps = 8/133 (6%)
Query: 60 ALTIQLFSKLFHFLNVWAFNRLVANNSIYCSKAWGVRIKNRLAHIQMWAERQGLELAADC 119
++ ++F+ +LNV FN L+ K +G + + + W E + ++ +
Sbjct: 1295 SMHTKIFNDTLKYLNVMLFNDLITKCPALNWK-YGYEVDRNIERLVSWFEPRIEDVRPN- 1352
Query: 120 HLAKLMQAAHLLQAPKYTGDELAELTSTCFKLNSLQLRALLLKYQP-TPDEPRLPHEVIE 178
L +++QA +LQ +E L + LN Q++A+LLKY+P E +P+E++
Sbjct: 1353 -LIQIIQAVKILQLKISNLNEFKLLFDFWYALNPAQIQAILLKYKPANKGEAGVPNEILN 1411
Query: 179 ---NVVRVAENLA 188
NV++ ENL+
Sbjct: 1412 YLANVIK-RENLS 1423
>sp|Q875X4|MYO2B_NAUCC Myosin-2B OS=Naumovozyma castellii (strain ATCC 76901 / CBS 4309 /
NBRC 1992 / NRRL Y-12630) GN=MYO2B PE=3 SV=2
Length = 1419
Score = 43.1 bits (100), Expect = 0.004, Method: Composition-based stats.
Identities = 36/146 (24%), Positives = 63/146 (43%), Gaps = 4/146 (2%)
Query: 61 LTIQLFSKLFHFLNVWAFNRL-VANNSIYCSKAWGVRIKNRLAHIQMWAERQGLELAADC 119
L + + L +N FN L + N++ S G+ + + + W + + +
Sbjct: 1234 LLTNIITALLQHINAKWFNDLLIKQNTL--SWTHGLEKDSEIKKVLDWCNSHKIRNSTE- 1290
Query: 120 HLAKLMQAAHLLQAPKYTGDELAELTSTCFKLNSLQLRALLLKYQPTPDEPRLPHEVIEN 179
+L + QA LLQ + + C+ L+SLQ+ ALL KY+PT E +P +V+ +
Sbjct: 1291 YLRNVNQACKLLQLRISNISDFQLVCEFCYDLSSLQMHALLTKYRPTQFEKPIPVDVLNH 1350
Query: 180 VVRVAENLADELARSDGRDVCLEEES 205
+ A + R D E S
Sbjct: 1351 LSNTARRERTTMKRELTLDAGTETYS 1376
>sp|A7UA95|RADIL_DANRE Ras-associating and dilute domain-containing protein OS=Danio rerio
GN=radil PE=2 SV=1
Length = 1124
Score = 42.7 bits (99), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 67/149 (44%), Gaps = 14/149 (9%)
Query: 25 GVLMSAMALLRGCRLNVLGVLMSAMALLRGCRLNAALTIQLFSKLFHFLNVWAFNRLVAN 84
GV + A+ ++ V+ V + LL+ ++++ + Q+F+ LF F NV FN+L+
Sbjct: 632 GVCVCAVCVMPEAVRRVVSVFQTTSDLLQQYQVHSEIQSQMFAYLFFFTNVSLFNQLIDK 691
Query: 85 NSIYCSKAWGVRIKNRLAHIQM-------WAERQGLELAADCHLAKLMQAAHLLQAPKYT 137
++ W R +R+ IQ WA+ G A AK +L +P
Sbjct: 692 GP---ARGWFQR--SRVLQIQASVKILLDWAKGAGHNHLAQKFFAKFCSTVTILASPPQQ 746
Query: 138 GDELA--ELTSTCFKLNSLQLRALLLKYQ 164
+++ L + L +QL +L +YQ
Sbjct: 747 LSQMSWKALCAEHPSLKPVQLHRILTQYQ 775
Score = 34.3 bits (77), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 26/45 (57%)
Query: 316 VLEIREETEEAFLHALITDLEPSAPSFKLAPAYTLYLAARYRAST 360
LE E+A ++ ++T +EPS KL PAY L L ++ A+T
Sbjct: 433 ALEFERAHEDALVNRVLTLIEPSGDDHKLTPAYLLCLCIKHSANT 477
>sp|Q5U651|RAIN_HUMAN Ras-interacting protein 1 OS=Homo sapiens GN=RASIP1 PE=1 SV=1
Length = 963
Score = 42.7 bits (99), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 52/131 (39%), Gaps = 4/131 (3%)
Query: 41 VLGVLMSAMALLRGCRLNAALTIQLFSKLFHFLNVWAFNRLVANNSIYCSKAW--GVRIK 98
LGV +A+ L C L+ L Q F LF F N N L+ W V+I+
Sbjct: 747 TLGVFQAALELTSQCELHPDLVSQTFGYLFFFSNASLLNSLMERGQGRPFYQWSRAVQIR 806
Query: 99 NRLAHIQMWAERQGLELAADCHLAKLMQAAHLLQAPKYT--GDELAELTSTCFKLNSLQL 156
L + W + GL A KL A +LL P+ + + L + L QL
Sbjct: 807 TNLDLVLDWLQGAGLGDIATEFFRKLSMAVNLLCVPRTSLLKASWSSLRTDHPTLTPAQL 866
Query: 157 RALLLKYQPTP 167
LL YQ P
Sbjct: 867 HHLLSHYQLGP 877
>sp|Q3U0S6|RAIN_MOUSE Ras-interacting protein 1 OS=Mus musculus GN=Rasip1 PE=1 SV=3
Length = 961
Score = 42.4 bits (98), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 52/131 (39%), Gaps = 4/131 (3%)
Query: 41 VLGVLMSAMALLRGCRLNAALTIQLFSKLFHFLNVWAFNRLVANNSIYCSKAW--GVRIK 98
LGV +A+ L C L+ L Q F LF F N N L+ W V+I+
Sbjct: 745 TLGVFQAALELTSQCELHPDLVSQTFGYLFFFSNASLLNSLMERGQGRPFYQWSRAVQIR 804
Query: 99 NRLAHIQMWAERQGLELAADCHLAKLMQAAHLLQAPKYT--GDELAELTSTCFKLNSLQL 156
L + W + GL A KL A +LL P+ + + L + L QL
Sbjct: 805 TNLDLVLDWLQGAGLGDIATEFFRKLSIAVNLLCVPRTSLLKASWSSLRTDYPTLTPAQL 864
Query: 157 RALLLKYQPTP 167
LL YQ P
Sbjct: 865 HHLLSHYQLGP 875
>sp|O94477|MYO52_SCHPO Myosin-52 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=myo52 PE=1 SV=1
Length = 1516
Score = 40.8 bits (94), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 82/192 (42%), Gaps = 17/192 (8%)
Query: 40 NVLGVLMSAMALLRGCRLNAALTIQLFSKLFHFLNVWAFNRLVANNSIYCSKAW--GVRI 97
+V+ VL + ++N + L ++ F+NV AFN L + +W G I
Sbjct: 1288 DVIHVLNKVHDSCQAYKVNYEIYNALIRSIYRFINVEAFNSLFIDE----RGSWKRGTNI 1343
Query: 98 KNRLAHIQMWAERQGLELAADCHLAKLMQAAHLLQAPKYTGDELAELTSTCFKLNSLQLR 157
++ W G+ A L +L+Q + +LQ K + +A + + LN LQ++
Sbjct: 1344 SYNYHVLKDWCLESGVP-EAYLQLEELLQTSKILQFVKDDPNYVARVRD-FYALNFLQIK 1401
Query: 158 ALLLKYQPTPDEPRLPH----EVIENVVRVAENLADELARS--DGRDVCLEEESELLLPF 211
LL +Y E +P E+ +N+V N ++L D R EES L
Sbjct: 1402 TLLHRYDYADYEAHVPKKTMSELSKNIVAEGINQREQLTYEVLDYRLQDSFEESPSLEKI 1461
Query: 212 LLPDDGYSCEVV 223
+PDD C V
Sbjct: 1462 KIPDD---CNVT 1470
>sp|Q96JH8|RADIL_HUMAN Ras-associating and dilute domain-containing protein OS=Homo
sapiens GN=RADIL PE=1 SV=5
Length = 1075
Score = 40.0 bits (92), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 56/132 (42%), Gaps = 10/132 (7%)
Query: 40 NVLGVLMSAMALLRGCRLNAALTIQLFSKLFHFLNVWAFNRLVANNSIYCSKAW--GVRI 97
V+ V +A+ LLR +++ + Q+ + LF F N+L+ W GV+
Sbjct: 611 RVVSVYQAALDLLRQLQVHPEVASQMLAYLFFFSGTLLLNQLLDRGPSLSCFHWPRGVQA 670
Query: 98 KNRLAHIQMWAERQGLELAADCHLAKLMQAAHLLQAPKYTGDELAELTSTCFK-----LN 152
RL + W G A + KL +LL P+ +L +++ T + L+
Sbjct: 671 CARLQQLLEWMRSAGFGAAGEHFFQKLSCTLNLLATPRA---QLIQMSWTALRAAFPALS 727
Query: 153 SLQLRALLLKYQ 164
QL LL YQ
Sbjct: 728 PAQLHRLLTHYQ 739
Score = 32.3 bits (72), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Query: 316 VLEIREETEEAFLHALITDLEPSAPSFKLAPAYTLYLAARYRASTHYRP 364
+LE E+ L ++T +EP KL PA+ L L ++ A TH++P
Sbjct: 406 LLEFEPHLEDTLLQRIMTLIEPGGDDHKLTPAFLLCLCIQHSA-THFQP 453
>sp|Q875Q8|MYO2_LACK1 Myosin-2 OS=Lachancea kluyveri (strain ATCC 58438 / CBS 3082 / CCRC
21498 / NBRC 1685 / JCM 7257 / NCYC 543 / NRRL Y-12651)
GN=MYO2 PE=3 SV=1
Length = 1554
Score = 37.4 bits (85), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 62/130 (47%), Gaps = 6/130 (4%)
Query: 69 LFHFLNVWAFNRLVANNSIYCSKAWGVRIKNRLAHIQMWAERQGLELAADCHLAKLMQAA 128
L +++ FN L+ + + S G+++ + ++ W + L +C L ++QA+
Sbjct: 1365 LLKYVDAICFNDLIMRRN-FLSWKRGLQLNYNVTRLEEWCKSHQLPEGTEC-LQHMLQAS 1422
Query: 129 HLLQAPKYTGDELAELTSTCFKLNSLQLRALLLKYQPTPDEPRLPHEVIENVVRVAENLA 188
LLQ K +++ + C L Q++ L+ +Y E +P E++ VA+ +
Sbjct: 1423 KLLQLKKANLEDINIIWEICSSLKPAQIQKLISQYAVADYEVPIPQEILN---FVADRVK 1479
Query: 189 DELA-RSDGR 197
E + SDG+
Sbjct: 1480 KESSLSSDGK 1489
>sp|Q8IYM0|F186B_HUMAN Protein FAM186B OS=Homo sapiens GN=FAM186B PE=2 SV=2
Length = 893
Score = 32.0 bits (71), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 36/67 (53%), Gaps = 9/67 (13%)
Query: 97 IKNRLAHIQMWAERQGLELAADCHLAKLMQAAHLLQAPKYTGDELAELTSTCFKLNSLQL 156
IK ++ H+ M A+R+ L+L ++ L+ P Y + ELT+T +L +L+L
Sbjct: 657 IKKKVYHMDMEAQRKNLQLLSE---------ESELRLPHYLRSKALELTTTTMELGALRL 707
Query: 157 RALLLKY 163
+ L KY
Sbjct: 708 QYLCHKY 714
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.135 0.403
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 144,019,391
Number of Sequences: 539616
Number of extensions: 5785321
Number of successful extensions: 13267
Number of sequences better than 100.0: 33
Number of HSP's better than 100.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 21
Number of HSP's that attempted gapping in prelim test: 13227
Number of HSP's gapped (non-prelim): 55
length of query: 410
length of database: 191,569,459
effective HSP length: 120
effective length of query: 290
effective length of database: 126,815,539
effective search space: 36776506310
effective search space used: 36776506310
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 62 (28.5 bits)