Query psy2532
Match_columns 410
No_of_seqs 184 out of 417
Neff 5.3
Searched_HMMs 13730
Date Fri Aug 16 18:37:30 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy2532.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/2532hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2nxoa1 c.94.1.1 (A:5-281) Hyp 34.0 65 0.0047 27.0 8.4 65 116-188 197-261 (277)
2 d1wlza1 a.39.1.7 (A:229-311) D 19.9 1.3E+02 0.0093 20.5 8.6 53 120-173 18-74 (83)
3 d1ow5a_ a.60.1.2 (A:) Serine/t 17.5 25 0.0018 23.8 1.6 39 104-145 3-42 (60)
4 d2f3na1 a.60.1.2 (A:2-65) Sh3 15.5 27 0.002 23.6 1.4 42 100-144 5-46 (64)
5 d2h9da1 a.130.1.1 (A:1-94) Sal 15.2 93 0.0068 22.6 4.6 36 38-73 51-86 (94)
6 d1z0xa2 a.121.1.1 (A:72-220) T 9.1 3.2E+02 0.023 20.6 6.4 46 35-80 32-77 (149)
7 d2abwa1 c.23.16.1 (A:2-219) Py 8.8 55 0.004 26.5 1.4 19 357-375 189-207 (218)
8 d1bf5a1 a.47.1.1 (A:136-316) S 8.2 2.3E+02 0.017 23.2 5.3 30 94-129 114-143 (181)
9 d1ecma_ a.130.1.1 (A:) Chorism 8.1 2.4E+02 0.018 19.8 4.8 38 36-73 43-80 (91)
10 d2g7la2 a.121.1.1 (A:87-230) P 7.9 2.9E+02 0.021 20.4 5.6 44 35-78 32-75 (144)
No 1
>d2nxoa1 c.94.1.1 (A:5-281) Hypothetical protein SCo4506 {Streptomyces coelicolor [TaxId: 1902]}
Probab=34.04 E-value=65 Score=27.03 Aligned_cols=65 Identities=11% Similarity=0.090 Sum_probs=48.1
Q ss_pred HHHHhhHhHHHHHHhhhCCCCCHHHHHHHHHhhhhcCHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhhh
Q psy2532 116 AADCHLAKLMQAAHLLQAPKYTGDELAELTSTCFKLNSLQLRALLLKYQPTPDEPRLPHEVIENVVRVAENLA 188 (410)
Q Consensus 116 aa~~~L~~L~QAa~LLq~~K~s~~Dl~~i~~~C~~LN~~QL~~LL~~Y~p~~~E~~Ip~e~i~~Vv~~ae~~~ 188 (410)
....+++-+.+|.++..-.+ ++..++...-..+.+..+.+.++.|+++ +.++..+.+..-.+...
T Consensus 197 ~~~~~~~a~~~a~~~~~~~p---~ea~~~~a~~~~i~~~~~~~~~~~~~~~-----~~~~~~~~l~~f~~~~~ 261 (277)
T d2nxoa1 197 ITRKVHEAFLASRNLSLEEV---EKVAEQAARWEAFDEDTLAKYFTTLDFR-----FGAPQLEAVTEFARRVG 261 (277)
T ss_dssp HHHHHHHHHHHHHHHHHHTH---HHHHHHHHTTSSSCHHHHHHHHHHSBCC-----CSHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHHhCH---HHHHHHHHHHcCCCHHHHHHHHHhCcCC-----CCHHHHHHHHHHHHHHH
Confidence 45567888889999886544 7777777777789999999999998774 56676776665554443
No 2
>d1wlza1 a.39.1.7 (A:229-311) DJ-1-binding protein, DJBP {Human (Homo sapiens) [TaxId: 9606]}
Probab=19.85 E-value=1.3e+02 Score=20.52 Aligned_cols=53 Identities=17% Similarity=0.164 Sum_probs=38.9
Q ss_pred hhHhHHHHHHhhhCCCC---CHHHHHHHH-HhhhhcCHHHHHHHHhcCCCCCCCCCCC
Q psy2532 120 HLAKLMQAAHLLQAPKY---TGDELAELT-STCFKLNSLQLRALLLKYQPTPDEPRLP 173 (410)
Q Consensus 120 ~L~~L~QAa~LLq~~K~---s~~Dl~~i~-~~C~~LN~~QL~~LL~~Y~p~~~E~~Ip 173 (410)
++..+.++-+.+-..++ +.+++..++ ..|..|+..|+..|+..|..+.. +.|+
T Consensus 18 ~~~~l~~~F~~~D~~~~G~i~~~ef~~~l~~~~~~l~~~e~~~l~~~~d~~~~-g~I~ 74 (83)
T d1wlza1 18 HYHAITQEFENFDTMKTNTISREEFRAICNRRVQILTDEQFDRLWNEMPVNAK-GRLK 74 (83)
T ss_dssp THHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHTCCCCHHHHHHHHTTSCBCTT-SCBC
T ss_pred HHHHHHHHHHHHCCCCCceEChhHHHHHHHHhCCCCChhHHHHHhhccccCCC-CcEe
Confidence 46778888888866664 467777654 66789999999999999977433 3444
No 3
>d1ow5a_ a.60.1.2 (A:) Serine/threonine-protein kinase ste11 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=17.50 E-value=25 Score=23.81 Aligned_cols=39 Identities=23% Similarity=0.275 Sum_probs=24.4
Q ss_pred HHHHHHHcCCchHHHHhhHh-HHHHHHhhhCCCCCHHHHHHHH
Q psy2532 104 IQMWAERQGLELAADCHLAK-LMQAAHLLQAPKYTGDELAELT 145 (410)
Q Consensus 104 LeeW~~~~gL~~aa~~~L~~-L~QAa~LLq~~K~s~~Dl~~i~ 145 (410)
+++|.++.||+.-++.|.+. ......|+.+.. +|+.+++
T Consensus 3 V~~wL~~lgL~~Y~~~F~~~~~i~~~~l~~l~~---~dL~~lG 42 (60)
T d1ow5a_ 3 VQLFLEEIGCTQYLDSFIQCNLVTEEEIKYLDK---DILIALG 42 (60)
T ss_dssp HHHHHHHHSCTHHHHHHHHHTCCCHHHHHHCCH---HHHHHHT
T ss_pred HHHHHHHCcCHHHHHHHHHcCCCcHHHHHhCCH---HHHHHcC
Confidence 78999999999877654443 233444444433 6666553
No 4
>d2f3na1 a.60.1.2 (A:2-65) Sh3 and multiple ankyrin repeat domains 3 (Shank3) {Rat(Rattus norvegicus) [TaxId: 10116]}
Probab=15.53 E-value=27 Score=23.57 Aligned_cols=42 Identities=24% Similarity=0.286 Sum_probs=26.5
Q ss_pred hHHHHHHHHHHcCCchHHHHhhHhHHHHHHhhhCCCCCHHHHHHH
Q psy2532 100 RLAHIQMWAERQGLELAADCHLAKLMQAAHLLQAPKYTGDELAEL 144 (410)
Q Consensus 100 NLs~LeeW~~~~gL~~aa~~~L~~L~QAa~LLq~~K~s~~Dl~~i 144 (410)
+.+.+.+|++..|++.-++.|.+.-+--..|+.+.. +|+.++
T Consensus 5 s~~~V~~wL~~~gl~~y~~~F~~~~i~g~~L~~l~~---~dL~~l 46 (64)
T d2f3na1 5 SKFDVGDWLESIHLGEHRDRFEDHEIEGAHLPALTK---EDFVEL 46 (64)
T ss_dssp CHHHHHHHHHHTTCGGGHHHHHHTTCCGGGGGGCCH---HHHHHT
T ss_pred CHHHHHHHHHHCCCHHHHHHHHHCCCcHHHhhcCCH---HHHHHc
Confidence 356789999999998777764444333344555433 666543
No 5
>d2h9da1 a.130.1.1 (A:1-94) Salicylate biosynthesis protein PchB {Pseudomonas aeruginosa [TaxId: 287]}
Probab=15.16 E-value=93 Score=22.64 Aligned_cols=36 Identities=19% Similarity=0.278 Sum_probs=29.1
Q ss_pred HHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhh
Q psy2532 38 RLNVLGVLMSAMALLRGCRLNAALTIQLFSKLFHFL 73 (410)
Q Consensus 38 ~~~vl~vL~~~l~lLr~~~V~p~L~~QlFsQLF~fI 73 (410)
+...-.++..+......++++|.++.++|..++.+.
T Consensus 51 ~~Re~~vl~~~~~~a~~~gl~~~~i~~i~~~ii~~s 86 (94)
T d2h9da1 51 PERVAAMLPERARWAEENGLDAPFVEGLFAQIIHWY 86 (94)
T ss_dssp -CHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhCCcCHHHHHHHHHHHHHHH
Confidence 345566777888888999999999999999988653
No 6
>d1z0xa2 a.121.1.1 (A:72-220) Transcriptional regulator EF0787 {Enterococcus faecalis [TaxId: 1351]}
Probab=9.08 E-value=3.2e+02 Score=20.56 Aligned_cols=46 Identities=20% Similarity=0.164 Sum_probs=39.4
Q ss_pred ccCHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhhhHHHHHH
Q psy2532 35 RGCRLNVLGVLMSAMALLRGCRLNAALTIQLFSKLFHFLNVWAFNR 80 (410)
Q Consensus 35 ~~s~~~vl~vL~~~l~lLr~~~V~p~L~~QlFsQLF~fINa~lFN~ 80 (410)
++...+.+..++.++..|...++++.-....+.-+.+|+-..+...
T Consensus 32 ~~~~p~~l~~~e~~l~~L~~aGl~~~~a~~a~~~l~~~v~G~~~~~ 77 (149)
T d1z0xa2 32 VPAYPQRLRHLNQMMGILREAGFSPEMTHLAVTSLQHLLFGMIMDA 77 (149)
T ss_dssp CCCSHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccchHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445677899999999999999999999999999999998776554
No 7
>d2abwa1 c.23.16.1 (A:2-219) Pyridoxine biosynthesis protein 2, Pdx2 {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}
Probab=8.75 E-value=55 Score=26.54 Aligned_cols=19 Identities=26% Similarity=0.495 Sum_probs=15.9
Q ss_pred hcccCCCCCCChhhhhHHH
Q psy2532 357 RASTHYRPELIPTERAHRL 375 (410)
Q Consensus 357 ~~~~~~~~~~~p~~~~~~~ 375 (410)
.+.++|.||+|...|.||.
T Consensus 189 i~G~QFHPE~s~d~r~~~~ 207 (218)
T d2abwa1 189 CLGTVFHPELLPHTAFQQY 207 (218)
T ss_dssp EEEESSCGGGSSCCHHHHH
T ss_pred EEEEEcCCeecCCchHHHH
Confidence 5678999999998888773
No 8
>d1bf5a1 a.47.1.1 (A:136-316) STAT-1, coiled coil domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=8.23 E-value=2.3e+02 Score=23.23 Aligned_cols=30 Identities=23% Similarity=0.316 Sum_probs=20.6
Q ss_pred hHHHHhhHHHHHHHHHHcCCchHHHHhhHhHHHHHH
Q psy2532 94 GVRIKNRLAHIQMWAERQGLELAADCHLAKLMQAAH 129 (410)
Q Consensus 94 GvqIr~NLs~LeeW~~~~gL~~aa~~~L~~L~QAa~ 129 (410)
|.....+|+.|+.||+. .|++ +-.++|-+.
T Consensus 114 G~p~~~~LdqLQ~W~e~-----lae~-l~q~rqqlk 143 (181)
T d1bf5a1 114 GGPPNACLDQLQNWFTI-----VAES-LQQVRQQLK 143 (181)
T ss_dssp TSSCCCCTHHHHHHHHH-----HHHH-HHHHHHHHH
T ss_pred CCCCcccHHHHHHHHHH-----HHHH-HHHHHHHHH
Confidence 55556789999999987 5565 555555544
No 9
>d1ecma_ a.130.1.1 (A:) Chorismate mutase domain of P-protein {Escherichia coli [TaxId: 562]}
Probab=8.08 E-value=2.4e+02 Score=19.76 Aligned_cols=38 Identities=16% Similarity=0.073 Sum_probs=31.2
Q ss_pred cCHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhh
Q psy2532 36 GCRLNVLGVLMSAMALLRGCRLNAALTIQLFSKLFHFL 73 (410)
Q Consensus 36 ~s~~~vl~vL~~~l~lLr~~~V~p~L~~QlFsQLF~fI 73 (410)
..+..--.++..+...-...+++|..+.++|..++...
T Consensus 43 ~d~~RE~~il~~~~~~~~~~~l~~~~i~~i~~~ii~~s 80 (91)
T d1ecma_ 43 RDIDRERDLLERLITLGKAHHLDAHYITRLFQLIIEDS 80 (91)
T ss_dssp CCHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHhhcCCcCHHHHHHHHHHHHHHH
Confidence 34566677888888888999999999999999998654
No 10
>d2g7la2 a.121.1.1 (A:87-230) Putative transcriptional regulator SCO7704 {Streptomyces coelicolor [TaxId: 1902]}
Probab=7.95 E-value=2.9e+02 Score=20.40 Aligned_cols=44 Identities=20% Similarity=0.068 Sum_probs=37.7
Q ss_pred ccCHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhhhHHHH
Q psy2532 35 RGCRLNVLGVLMSAMALLRGCRLNAALTIQLFSKLFHFLNVWAF 78 (410)
Q Consensus 35 ~~s~~~vl~vL~~~l~lLr~~~V~p~L~~QlFsQLF~fINa~lF 78 (410)
++.....+.+++.++..|+..++.+.-....+.-+++|+-....
T Consensus 32 ~~~~p~~l~~~e~~l~~L~~aG~~~~~a~~~~~~l~~~v~g~~~ 75 (144)
T d2g7la2 32 RPSGENYLRLVERVLELLARSGAPGAQVAWGVDKLLQDATATAA 75 (144)
T ss_dssp CCCSHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCcccHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHH
Confidence 34446788999999999999999999999999999999876653
Done!