Query psy2533
Match_columns 684
No_of_seqs 316 out of 1896
Neff 5.0
Searched_HMMs 29240
Date Fri Aug 16 18:38:53 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy2533.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/2533hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3gsl_A Disks large homolog 4; 99.9 4E-23 1.4E-27 198.3 19.4 182 91-332 6-191 (196)
2 3r0h_A INAD, inactivation-NO-a 99.9 1.3E-22 4.4E-27 197.9 19.5 177 89-334 17-199 (206)
3 2xkx_A Disks large homolog 4; 99.9 9.6E-21 3.3E-25 218.8 22.8 186 89-334 58-247 (721)
4 2qt5_A Glutamate receptor-inte 99.8 1.7E-20 5.9E-25 182.9 17.9 189 90-333 7-197 (200)
5 1p1d_A PDZ45, glutamate recept 99.8 5.5E-20 1.9E-24 179.3 20.9 185 89-331 5-195 (196)
6 2xkx_A Disks large homolog 4; 99.8 3.6E-18 1.2E-22 197.4 21.4 207 92-335 156-395 (721)
7 3suz_A Amyloid beta A4 precurs 99.7 6E-19 2E-23 190.5 4.4 166 90-330 204-373 (388)
8 1w9e_A Syntenin 1; cell adhesi 99.7 4.2E-15 1.5E-19 141.3 19.4 158 90-329 4-164 (166)
9 3b76_A E3 ubiquitin-protein li 99.6 1.7E-14 5.7E-19 131.6 11.3 91 89-179 23-113 (118)
10 2db5_A INAD-like protein; PDZ 99.5 3.9E-14 1.3E-18 129.5 10.7 92 89-180 24-116 (128)
11 2iwo_A Multiple PDZ domain pro 99.5 3.1E-14 1E-18 129.8 9.0 92 89-180 23-114 (120)
12 1r6j_A Syntenin 1; PDZ, membra 99.5 9.6E-14 3.3E-18 119.7 10.1 77 90-177 4-80 (82)
13 3axa_A Afadin, nectin-3, prote 99.5 1.7E-13 5.7E-18 121.1 11.6 83 99-181 18-100 (106)
14 1i16_A Interleukin 16, LCF; cy 99.5 1.9E-13 6.4E-18 125.9 12.3 91 89-180 28-119 (130)
15 2ehr_A INAD-like protein; PDZ 99.5 2.1E-13 7.3E-18 122.6 11.5 93 88-180 13-111 (117)
16 3gge_A PDZ domain-containing p 99.5 1.9E-13 6.6E-18 121.2 10.8 85 90-180 5-91 (95)
17 2byg_A Channel associated prot 99.5 2.5E-13 8.5E-18 123.1 11.3 90 90-180 24-115 (117)
18 2d92_A INAD-like protein; PDZ 99.5 3.9E-13 1.3E-17 119.6 12.3 91 88-179 13-105 (108)
19 1wfg_A Regulating synaptic mem 99.5 6.5E-14 2.2E-18 129.4 7.5 81 100-180 46-128 (131)
20 2qg1_A Multiple PDZ domain pro 99.5 2.5E-13 8.4E-18 116.7 10.5 87 89-179 3-89 (92)
21 3l4f_D SH3 and multiple ankyri 99.5 4.9E-13 1.7E-17 123.8 13.3 93 87-180 24-125 (132)
22 3cbz_A Dishevelled-2; PDZ doma 99.5 8.8E-14 3E-18 124.1 7.8 90 90-180 5-97 (108)
23 1ujd_A KIAA0559 protein; PDZ d 99.5 2.1E-13 7.1E-18 123.2 10.3 92 90-181 12-111 (117)
24 1wi4_A Synip, syntaxin binding 99.5 3.3E-13 1.1E-17 120.8 11.6 87 90-179 15-105 (109)
25 4amh_A Disks large homolog 1; 99.5 2.2E-13 7.7E-18 121.1 10.2 84 97-180 8-93 (106)
26 2o2t_A Multiple PDZ domain pro 99.5 1.2E-13 4.2E-18 124.0 8.6 92 89-180 19-111 (117)
27 2fne_A Multiple PDZ domain pro 99.5 1.3E-13 4.6E-18 125.0 8.8 90 90-180 25-114 (117)
28 2dc2_A GOPC, golgi associated 99.4 2.7E-13 9.1E-18 119.9 10.2 90 89-181 8-97 (103)
29 2awx_A Synapse associated prot 99.4 4.2E-13 1.4E-17 118.5 11.4 90 91-181 4-95 (105)
30 1d5g_A Human phosphatase HPTP1 99.4 5.1E-13 1.7E-17 115.6 11.7 89 90-179 5-93 (96)
31 1qav_A Alpha-1 syntrophin (res 99.4 4E-13 1.4E-17 115.1 10.8 87 89-178 3-89 (90)
32 1ihj_A INAD; intermolecular di 99.4 3.7E-13 1.3E-17 116.9 10.5 90 90-179 5-97 (98)
33 2i1n_A Discs, large homolog 3; 99.4 5.9E-13 2E-17 116.6 11.8 90 91-181 5-96 (102)
34 2fe5_A Presynaptic protein SAP 99.4 6.8E-13 2.3E-17 114.2 11.7 88 91-179 4-93 (94)
35 1um1_A KIAA1849 protein, RSGI 99.4 7.3E-13 2.5E-17 117.7 12.2 92 89-181 7-98 (110)
36 3egg_C Spinophilin; PP1, serin 99.4 4.3E-13 1.5E-17 129.9 11.4 86 92-178 82-170 (170)
37 2jik_A Synaptojanin-2 binding 99.4 7.1E-13 2.4E-17 115.9 11.7 90 90-180 7-98 (101)
38 1v62_A KIAA1719 protein; struc 99.4 6.1E-13 2.1E-17 120.3 11.6 90 89-180 14-103 (117)
39 1uhp_A Hypothetical protein KI 99.4 5.4E-13 1.8E-17 118.2 10.9 92 88-180 6-102 (107)
40 2vwr_A Ligand of NUMB protein 99.4 6E-13 2E-17 115.1 10.8 86 91-180 4-90 (95)
41 4e34_A Golgi-associated PDZ an 99.4 5.6E-13 1.9E-17 113.4 10.4 83 91-177 3-86 (87)
42 1wf8_A Neurabin-I; PDZ domain, 99.4 9.1E-13 3.1E-17 116.7 11.8 89 91-180 10-101 (107)
43 1wg6_A Hypothetical protein (r 99.4 3.1E-13 1.1E-17 124.2 8.6 83 98-180 33-123 (127)
44 1x6d_A Interleukin-16; PDZ dom 99.4 1.2E-12 4E-17 118.1 12.0 90 89-180 14-104 (119)
45 1uju_A Scribble; PDZ domain, c 99.4 3.7E-13 1.3E-17 120.0 8.6 90 90-179 9-104 (111)
46 3hpk_A Protein interacting wit 99.4 9.3E-13 3.2E-17 119.9 11.3 90 87-179 16-105 (125)
47 3o46_A Maguk P55 subfamily mem 99.4 1.1E-12 3.8E-17 113.2 10.9 86 89-179 3-88 (93)
48 1kwa_A Hcask/LIN-2 protein; PD 99.4 9.1E-13 3.1E-17 113.4 10.1 84 91-179 2-85 (88)
49 2q3g_A PDZ and LIM domain prot 99.4 1.1E-12 3.6E-17 112.2 10.3 84 92-179 3-86 (89)
50 1q7x_A PDZ2B domain of PTP-BAS 99.4 7.5E-13 2.6E-17 117.3 9.7 91 89-180 8-103 (108)
51 2eno_A Synaptojanin-2-binding 99.4 1.3E-12 4.4E-17 118.2 11.1 90 90-180 17-108 (120)
52 2q9v_A Membrane-associated gua 99.4 7.6E-13 2.6E-17 113.2 9.1 85 91-179 3-89 (90)
53 2uzc_A Human pdlim5, PDZ and L 99.4 1.4E-12 4.8E-17 111.1 10.7 83 93-179 4-86 (88)
54 2pa1_A PDZ and LIM domain prot 99.4 1.5E-12 5E-17 110.9 10.8 83 93-179 3-85 (87)
55 2dmz_A INAD-like protein; PDZ 99.4 1.4E-12 4.7E-17 119.2 11.3 91 90-180 15-107 (129)
56 1ufx_A KIAA1526 protein; PDZ d 99.4 1.1E-12 3.7E-17 116.5 10.2 86 91-179 7-97 (103)
57 1wha_A KIAA0147 protein, scrib 99.4 1.1E-12 3.8E-17 115.7 10.3 87 92-179 9-98 (105)
58 1uew_A Membrane associated gua 99.4 2.9E-12 9.9E-17 114.9 12.7 91 89-180 9-104 (114)
59 2g5m_B Neurabin-2; spinophilin 99.4 8.8E-13 3E-17 117.7 9.2 88 93-181 7-97 (113)
60 2csj_A TJP2 protein; PDZ domai 99.4 1.3E-12 4.5E-17 117.6 10.3 89 90-180 14-105 (117)
61 3nfk_A Tyrosine-protein phosph 99.4 9.4E-13 3.2E-17 116.3 9.2 87 89-178 16-107 (107)
62 2cs5_A Tyrosine-protein phosph 99.4 1.3E-12 4.4E-17 117.9 10.2 89 89-180 14-107 (119)
63 3rle_A Golgi reassembly-stacki 99.4 3.7E-12 1.3E-16 126.0 14.2 164 103-332 3-171 (209)
64 3i4w_A Disks large homolog 4; 99.4 2.8E-12 9.7E-17 112.3 11.8 88 89-181 10-97 (104)
65 2yt7_A Amyloid beta A4 precurs 99.4 3.8E-12 1.3E-16 111.9 12.5 91 89-180 8-100 (101)
66 2dkr_A LIN-7 homolog B; LIN-7B 99.4 1.9E-12 6.4E-17 111.2 10.3 87 89-179 4-90 (93)
67 2jil_A GRIP1 protein, glutamat 99.4 2.6E-12 8.8E-17 111.4 11.0 87 93-180 6-93 (97)
68 2ego_A General receptor for ph 99.4 2.8E-12 9.6E-17 111.4 11.2 88 90-178 4-95 (96)
69 2kpk_A Membrane-associated gua 99.4 4.5E-12 1.5E-16 116.4 13.0 90 88-181 16-107 (129)
70 2daz_A INAD-like protein; PDZ 99.4 2.5E-12 8.5E-17 117.1 11.1 90 89-181 24-113 (124)
71 1m5z_A GRIP, AMPA receptor int 99.4 3.8E-12 1.3E-16 109.1 11.4 85 89-178 5-90 (91)
72 1ueq_A Membrane associated gua 99.4 6.5E-12 2.2E-16 114.3 13.6 89 89-181 18-108 (123)
73 1g9o_A NHE-RF; PDZ domain, com 99.4 4.6E-12 1.6E-16 108.5 11.7 83 91-179 4-86 (91)
74 1z87_A Alpha-1-syntrophin; pro 99.4 1.6E-12 5.5E-17 134.2 10.5 95 84-181 71-165 (263)
75 1mfg_A ERB-B2 interacting prot 99.4 4.9E-12 1.7E-16 109.4 11.8 83 95-179 6-93 (95)
76 2he4_A Na(+)/H(+) exchange reg 99.4 4.4E-12 1.5E-16 108.6 11.3 84 90-179 4-87 (90)
77 1uep_A Membrane associated gua 99.3 1.2E-12 4.2E-17 115.3 7.7 86 91-180 10-97 (103)
78 2jre_A C60-1 PDZ domain peptid 99.3 5.9E-12 2E-16 111.3 11.9 91 90-180 12-105 (108)
79 2opg_A Multiple PDZ domain pro 99.3 6E-12 2.1E-16 109.2 11.6 87 91-180 5-91 (98)
80 4a8c_A Periplasmic PH-dependen 99.3 1.1E-11 3.9E-16 135.4 16.6 157 119-334 263-423 (436)
81 1wi2_A Riken cDNA 2700099C19; 99.3 5.4E-12 1.8E-16 111.4 11.3 87 89-180 14-100 (104)
82 1q3o_A Shank1; PDZ, GKAP, pept 99.3 6.7E-12 2.3E-16 111.5 11.9 90 90-180 7-105 (109)
83 2qkv_A Inactivation-NO-after-p 99.3 5.1E-12 1.7E-16 110.1 10.8 86 89-180 7-92 (96)
84 1nf3_C PAR-6B; semi-CRIB motif 99.3 2.2E-12 7.4E-17 118.4 8.8 93 87-179 26-125 (128)
85 2h2b_A Tight junction protein 99.3 8.5E-12 2.9E-16 110.1 12.4 90 89-180 6-98 (107)
86 1va8_A Maguk P55 subfamily mem 99.3 8.3E-12 2.8E-16 112.0 12.4 86 89-180 24-109 (113)
87 3qe1_A Sorting nexin-27, G pro 99.3 7E-12 2.4E-16 110.7 11.6 89 90-180 6-103 (107)
88 2i04_A Membrane-associated gua 99.3 6.4E-12 2.2E-16 106.3 10.9 81 93-177 3-85 (85)
89 1rgw_A ZAsp protein; PDZ, cyph 99.3 2.8E-12 9.5E-17 108.4 8.6 77 99-179 8-84 (85)
90 2r4h_A Membrane-associated gua 99.3 5.3E-12 1.8E-16 113.1 10.7 87 89-179 23-109 (112)
91 2la8_A Inactivation-NO-after-p 99.3 3.7E-12 1.3E-16 113.7 9.4 83 92-180 4-86 (106)
92 1x5q_A LAP4 protein; PDZ domai 99.3 1.5E-11 5.3E-16 109.1 13.4 90 89-180 14-106 (110)
93 2dlu_A INAD-like protein; PDZ 99.3 1E-11 3.4E-16 110.5 12.1 86 90-181 15-100 (111)
94 3e17_A Tight junction protein 99.3 5.2E-12 1.8E-16 108.7 9.8 79 93-180 3-82 (88)
95 2djt_A Unnamed protein product 99.3 5.2E-12 1.8E-16 111.0 10.0 90 89-180 10-99 (104)
96 1n7t_A 99-MER peptide of densi 99.3 5.5E-12 1.9E-16 110.8 9.8 87 89-179 10-101 (103)
97 2pkt_A PDZ and LIM domain prot 99.3 8E-12 2.7E-16 107.2 10.5 84 93-180 4-87 (91)
98 2ejy_A 55 kDa erythrocyte memb 99.3 6.2E-12 2.1E-16 111.2 10.0 83 91-178 13-95 (97)
99 2v90_A PDZ domain-containing p 99.3 1.1E-11 3.7E-16 107.4 11.2 88 90-180 3-90 (96)
100 2w4f_A Protein LAP4; structura 99.3 1.4E-11 4.6E-16 106.6 11.7 86 93-180 6-94 (97)
101 2koj_A Partitioning defective 99.3 2.1E-11 7.1E-16 108.3 13.0 83 98-180 18-102 (111)
102 1n7e_A AMPA receptor interacti 99.3 1.4E-11 4.7E-16 107.1 11.5 85 92-180 7-91 (97)
103 1wf7_A Enigma homologue protei 99.3 7.1E-12 2.4E-16 110.2 9.7 86 90-181 5-90 (103)
104 2fcf_A Multiple PDZ domain pro 99.3 1E-11 3.5E-16 108.7 10.6 91 90-180 4-100 (103)
105 3r68_A Na(+)/H(+) exchange reg 99.3 9.5E-12 3.2E-16 107.2 10.0 85 90-180 5-89 (95)
106 3ngh_A PDZ domain-containing p 99.3 7.5E-12 2.5E-16 110.3 9.4 86 91-181 2-87 (106)
107 1v6b_A Harmonin isoform A1; st 99.3 6.7E-12 2.3E-16 113.7 9.3 86 91-180 19-108 (118)
108 2vsp_A PDZ domain-containing p 99.3 3.4E-12 1.2E-16 109.7 6.3 84 91-180 4-87 (91)
109 2iwq_A Multiple PDZ domain pro 99.3 1.4E-11 4.6E-16 112.8 10.2 90 91-180 25-120 (123)
110 2eeg_A PDZ and LIM domain prot 99.3 8.8E-12 3E-16 107.9 8.2 82 92-179 10-91 (94)
111 1vb7_A PDZ and LIM domain 2; P 99.3 6.4E-12 2.2E-16 108.8 7.3 86 91-180 5-90 (94)
112 3k1r_A Harmonin; protein-prote 99.3 1.6E-11 5.4E-16 119.9 10.8 88 89-181 83-170 (192)
113 1tp5_A Presynaptic density pro 99.3 2.5E-11 8.6E-16 109.2 11.0 89 88-181 12-100 (119)
114 3khf_A Microtubule-associated 99.3 1.8E-11 6.1E-16 106.6 9.6 85 94-180 6-94 (99)
115 2eeh_A PDZ domain-containing p 99.3 2.9E-11 9.8E-16 105.8 10.9 87 89-180 9-95 (100)
116 2e7k_A Maguk P55 subfamily mem 99.2 9.5E-12 3.2E-16 107.7 7.6 83 90-179 6-88 (91)
117 2kom_A Partitioning defective 99.2 5E-11 1.7E-15 108.4 12.6 83 97-179 36-120 (121)
118 2gzv_A PRKCA-binding protein; 99.2 3.4E-11 1.2E-15 108.7 11.4 87 89-178 23-109 (114)
119 1v5q_A GRIP1 homolog, glutamat 99.2 2.2E-11 7.7E-16 110.6 10.1 92 89-180 14-108 (122)
120 2eei_A PDZ domain-containing p 99.2 1.3E-11 4.3E-16 108.9 8.0 86 89-180 7-92 (106)
121 2d90_A PDZ domain containing p 99.2 2.7E-11 9.3E-16 106.2 9.8 85 90-180 6-90 (102)
122 3sfj_A TAX1-binding protein 3; 99.2 3.2E-11 1.1E-15 105.8 10.2 86 92-178 6-104 (104)
123 2iwn_A Multiple PDZ domain pro 99.2 3.7E-11 1.3E-15 103.3 10.4 82 98-179 11-93 (97)
124 2dm8_A INAD-like protein; PDZ 99.2 2.6E-11 8.8E-16 108.5 9.6 88 91-181 18-105 (116)
125 2edp_A Fragment, shroom family 99.2 1.5E-11 5.1E-16 107.9 7.6 88 89-180 8-95 (100)
126 2f5y_A Regulator of G-protein 99.2 4.6E-11 1.6E-15 102.8 10.4 82 91-181 4-85 (91)
127 1wfv_A Membrane associated gua 99.2 1.5E-11 5.2E-16 107.4 7.2 85 92-180 13-97 (103)
128 2vz5_A TAX1-binding protein 3; 99.2 4.2E-11 1.4E-15 111.9 10.5 95 86-181 19-126 (139)
129 3pv2_A DEGQ; trypsin fold, PDZ 99.2 1.3E-11 4.4E-16 135.8 7.7 160 119-333 282-445 (451)
130 1um7_A Synapse-associated prot 99.2 2E-11 6.7E-16 108.4 7.4 89 88-181 13-101 (113)
131 2qbw_A PDZ-fibronectin fusion 99.2 5.5E-11 1.9E-15 114.9 10.7 75 101-177 1-80 (195)
132 2z17_A Pleckstrin homology SEC 99.2 8.2E-11 2.8E-15 103.6 10.6 85 90-175 15-103 (104)
133 3soe_A Membrane-associated gua 99.2 1.1E-10 3.7E-15 106.5 11.5 81 90-180 12-94 (113)
134 2kv8_A RGS12, regulator of G-p 99.2 1.5E-11 5E-16 103.8 5.3 79 91-178 3-81 (83)
135 2dls_A PDZ-rhogef, RHO guanine 99.2 1.3E-10 4.4E-15 100.5 11.2 82 89-180 7-88 (93)
136 2edz_A PDZ domain-containing p 99.2 6.5E-11 2.2E-15 106.0 9.5 87 90-181 13-99 (114)
137 1x5n_A Harmonin; PDZ domain, u 99.2 9.4E-11 3.2E-15 104.7 10.2 87 87-178 12-98 (114)
138 1y7n_A Amyloid beta A4 precurs 99.2 1.1E-10 3.9E-15 101.3 10.0 76 91-177 13-88 (90)
139 2lob_A Golgi-associated PDZ an 98.8 3.3E-12 1.1E-16 115.3 0.0 84 90-177 27-111 (112)
140 3bpu_A Membrane-associated gua 99.1 1.5E-10 5.2E-15 98.6 10.0 81 91-179 4-86 (88)
141 1v5l_A PDZ and LIM domain 3; a 99.1 3.4E-11 1.2E-15 106.0 5.9 80 98-181 11-90 (103)
142 3gge_A PDZ domain-containing p 99.1 1.1E-10 3.9E-15 103.5 8.9 61 274-334 29-93 (95)
143 1qau_A Neuronal nitric oxide s 99.1 2.6E-10 8.9E-15 101.3 11.3 86 92-181 3-89 (112)
144 2jxo_A Ezrin-radixin-moesin-bi 99.1 2E-10 6.7E-15 99.8 10.0 83 91-179 10-93 (98)
145 1uit_A Human discs large 5 pro 99.1 6.3E-10 2.2E-14 99.9 13.3 85 90-181 19-103 (117)
146 3gsl_A Disks large homolog 4; 99.1 2.4E-10 8.3E-15 109.3 11.1 86 94-180 104-191 (196)
147 1wif_A RSGI RUH-020, riken cDN 99.1 2.6E-10 9E-15 105.5 10.8 81 91-178 28-110 (126)
148 2edv_A FERM and PDZ domain-con 99.1 4.9E-11 1.7E-15 104.0 5.5 81 90-179 8-89 (96)
149 3r0h_A INAD, inactivation-NO-a 99.1 2.2E-10 7.6E-15 111.3 10.4 83 93-181 116-198 (206)
150 1uez_A KIAA1526 protein; PDZ d 99.1 1E-10 3.5E-15 102.3 7.2 87 89-180 7-94 (101)
151 1uf1_A KIAA1526 protein; PDZ d 99.1 6.6E-10 2.2E-14 101.4 12.2 87 90-181 20-106 (128)
152 2yuy_A RHO GTPase activating p 99.1 7.4E-11 2.5E-15 107.8 5.2 89 90-180 8-121 (126)
153 3tsv_A Tight junction protein 99.1 5.9E-10 2E-14 102.1 10.8 79 97-181 34-114 (124)
154 1ujv_A Membrane associated gua 99.1 1.5E-09 5.1E-14 94.8 12.7 81 90-180 10-92 (96)
155 2rcz_A Tight junction protein 99.1 7.3E-10 2.5E-14 92.0 9.9 74 96-178 7-80 (81)
156 1whd_A RGS3, regulator of G-pr 99.0 3.1E-10 1.1E-14 99.5 7.9 74 98-179 22-95 (100)
157 3kzd_A TIAM-1, T-lymphoma inva 99.0 8.8E-10 3E-14 97.4 10.8 85 90-179 6-92 (94)
158 2d8i_A T-cell lymphoma invasio 99.0 4.2E-10 1.4E-14 102.1 8.8 87 90-181 15-103 (114)
159 1b8q_A Protein (neuronal nitri 99.0 6.2E-10 2.1E-14 101.3 9.7 89 89-181 7-96 (127)
160 2vsv_A Rhophilin-2; scaffold p 99.0 4.7E-10 1.6E-14 101.1 8.5 81 90-179 23-104 (109)
161 2eaq_A LIM domain only protein 99.0 1.1E-09 3.9E-14 93.4 9.6 80 93-179 6-89 (90)
162 3cyy_A Tight junction protein 99.0 1.9E-09 6.4E-14 92.1 10.1 79 93-180 5-84 (92)
163 1ky9_A Protease DO, DEGP, HTRA 99.0 1E-10 3.5E-15 128.5 2.4 153 119-333 286-442 (448)
164 3shw_A Tight junction protein 99.0 1.1E-09 3.8E-14 121.2 10.5 83 92-182 3-87 (468)
165 1r6j_A Syntenin 1; PDZ, membra 99.0 1.2E-09 4.1E-14 94.1 8.1 47 282-329 34-80 (82)
166 2kjd_A Sodium/hydrogen exchang 99.0 2.9E-09 9.9E-14 96.7 11.0 85 90-180 9-94 (128)
167 2byg_A Channel associated prot 99.0 1.2E-09 4E-14 98.9 8.2 61 272-332 53-115 (117)
168 1uhp_A Hypothetical protein KI 98.9 3.5E-09 1.2E-13 93.5 10.3 62 271-332 39-102 (107)
169 1vae_A Rhophilin 2, rhophilin, 98.9 5.3E-10 1.8E-14 100.7 4.9 80 91-179 16-96 (111)
170 2qt5_A Glutamate receptor-inte 98.9 4E-09 1.4E-13 102.5 11.2 82 99-180 114-196 (200)
171 4amh_A Disks large homolog 1; 98.9 2.5E-09 8.5E-14 94.9 8.8 61 272-332 31-93 (106)
172 2i1n_A Discs, large homolog 3; 98.9 3E-09 1E-13 92.9 9.1 62 272-333 33-96 (102)
173 1i16_A Interleukin 16, LCF; cy 98.9 2.4E-09 8.1E-14 98.5 8.9 60 273-332 57-119 (130)
174 3egg_C Spinophilin; PP1, serin 98.9 1.7E-09 5.8E-14 104.6 8.1 59 272-330 110-170 (170)
175 2awx_A Synapse associated prot 98.9 2.6E-09 8.7E-14 94.1 8.5 63 272-334 32-96 (105)
176 2fe5_A Presynaptic protein SAP 98.9 3E-09 1E-13 91.3 8.7 60 272-331 32-93 (94)
177 3tsz_A Tight junction protein 98.9 3.8E-09 1.3E-13 114.4 10.9 84 91-182 10-95 (391)
178 3soe_A Membrane-associated gua 98.9 2.3E-09 7.7E-14 97.8 7.7 79 217-332 14-94 (113)
179 3axa_A Afadin, nectin-3, prote 98.9 3E-09 1E-13 93.7 7.7 65 272-336 37-103 (106)
180 2jik_A Synaptojanin-2 binding 98.9 5.7E-09 1.9E-13 91.0 9.1 61 272-332 36-98 (101)
181 1d5g_A Human phosphatase HPTP1 98.9 7.6E-09 2.6E-13 89.3 9.7 60 272-331 32-93 (96)
182 2d92_A INAD-like protein; PDZ 98.9 2.6E-09 9E-14 94.8 6.7 61 271-331 42-105 (108)
183 2yub_A LIMK-2, LIM domain kina 98.9 7.9E-09 2.7E-13 94.1 9.8 88 92-180 14-106 (118)
184 3o46_A Maguk P55 subfamily mem 98.8 5.3E-09 1.8E-13 90.0 7.9 59 273-331 28-88 (93)
185 2g5m_B Neurabin-2; spinophilin 98.8 6E-09 2E-13 92.8 8.4 63 272-334 34-98 (113)
186 1wf8_A Neurabin-I; PDZ domain, 98.8 3.1E-09 1.1E-13 93.9 6.4 61 272-332 39-101 (107)
187 1ueq_A Membrane associated gua 98.8 2.3E-08 8E-13 90.8 12.2 62 273-334 44-109 (123)
188 1kwa_A Hcask/LIN-2 protein; PD 98.8 5.3E-09 1.8E-13 89.8 7.4 59 274-332 26-86 (88)
189 1wha_A KIAA0147 protein, scrib 98.8 9.8E-09 3.3E-13 90.4 9.3 61 272-332 37-99 (105)
190 1wi4_A Synip, syntaxin binding 98.8 7.7E-09 2.6E-13 92.4 8.7 60 273-332 41-106 (109)
191 2fne_A Multiple PDZ domain pro 98.8 4E-09 1.4E-13 95.5 6.5 60 273-332 53-114 (117)
192 1wh1_A KIAA1095 protein; PDZ d 98.8 1.3E-08 4.5E-13 92.5 10.0 78 101-181 31-109 (124)
193 2dm8_A INAD-like protein; PDZ 98.8 2.4E-08 8.2E-13 89.1 11.5 64 273-336 43-108 (116)
194 1uep_A Membrane associated gua 98.8 8.5E-09 2.9E-13 90.6 8.4 60 273-332 34-97 (103)
195 3qik_A Phosphatidylinositol 3, 98.8 1.8E-08 6.1E-13 90.3 10.5 76 96-178 22-100 (101)
196 2krg_A Na(+)/H(+) exchange reg 98.8 4.3E-09 1.5E-13 105.6 7.1 85 90-180 9-94 (216)
197 1g9o_A NHE-RF; PDZ domain, com 98.8 1.2E-08 4.1E-13 87.2 8.8 58 273-331 27-86 (91)
198 2dkr_A LIN-7 homolog B; LIN-7B 98.8 1.1E-08 3.9E-13 87.5 8.6 59 273-331 30-90 (93)
199 2he4_A Na(+)/H(+) exchange reg 98.8 1.1E-08 3.7E-13 87.4 8.4 59 273-332 28-88 (90)
200 1um1_A KIAA1849 protein, RSGI 98.8 1.3E-08 4.4E-13 90.2 8.9 63 272-334 35-99 (110)
201 2ehr_A INAD-like protein; PDZ 98.8 2.1E-08 7.1E-13 90.0 10.3 63 271-333 48-112 (117)
202 2dlu_A INAD-like protein; PDZ 98.8 1.2E-08 4.1E-13 90.5 8.7 61 273-333 38-100 (111)
203 3i4w_A Disks large homolog 4; 98.8 7.3E-09 2.5E-13 90.5 7.0 63 273-335 35-99 (104)
204 3e17_A Tight junction protein 98.8 8.9E-09 3E-13 88.4 7.3 60 274-333 22-83 (88)
205 1q7x_A PDZ2B domain of PTP-BAS 98.8 1.2E-08 4.1E-13 90.2 8.2 61 272-332 41-103 (108)
206 2daz_A INAD-like protein; PDZ 98.8 1.3E-08 4.3E-13 92.5 8.5 63 273-335 51-115 (124)
207 2opg_A Multiple PDZ domain pro 98.8 1.5E-08 5.2E-13 87.6 8.6 62 273-334 30-93 (98)
208 2eno_A Synaptojanin-2-binding 98.8 2.5E-08 8.6E-13 89.9 10.2 62 272-333 46-109 (120)
209 1n7e_A AMPA receptor interacti 98.8 2E-08 6.7E-13 87.1 9.1 60 273-332 30-91 (97)
210 1ufx_A KIAA1526 protein; PDZ d 98.8 9.3E-09 3.2E-13 91.1 7.1 58 274-331 33-97 (103)
211 3b76_A E3 ubiquitin-protein li 98.8 1.3E-08 4.5E-13 92.5 8.2 60 272-331 52-113 (118)
212 1p1d_A PDZ45, glutamate recept 98.8 1.7E-08 5.9E-13 98.0 9.6 87 92-179 109-195 (196)
213 2i04_A Membrane-associated gua 98.8 1.8E-08 6.2E-13 85.0 8.3 57 273-329 25-85 (85)
214 2vsp_A PDZ domain-containing p 98.8 1.9E-08 6.6E-13 86.1 8.6 58 274-332 28-87 (91)
215 2kv8_A RGS12, regulator of G-p 98.8 1.9E-08 6.5E-13 84.6 8.2 56 275-331 25-82 (83)
216 2jil_A GRIP1 protein, glutamat 98.8 1.3E-08 4.5E-13 87.9 7.3 61 272-332 31-93 (97)
217 2q9v_A Membrane-associated gua 98.8 1.1E-08 3.8E-13 87.2 6.7 58 274-331 28-89 (90)
218 2vwr_A Ligand of NUMB protein 98.7 2E-08 6.8E-13 86.6 8.2 61 273-333 29-91 (95)
219 2djt_A Unnamed protein product 98.7 2.1E-08 7.3E-13 87.8 8.4 61 273-333 38-100 (104)
220 2iwo_A Multiple PDZ domain pro 98.7 1.7E-08 5.7E-13 91.8 7.9 61 273-333 53-115 (120)
221 2qg1_A Multiple PDZ domain pro 98.7 2.6E-08 8.9E-13 85.2 8.7 60 273-332 29-90 (92)
222 2r4h_A Membrane-associated gua 98.7 1.5E-08 5.1E-13 90.6 7.5 60 273-332 49-110 (112)
223 2f5y_A Regulator of G-protein 98.7 2.5E-08 8.7E-13 85.5 8.6 60 274-334 25-86 (91)
224 1va8_A Maguk P55 subfamily mem 98.7 3.8E-08 1.3E-12 88.1 10.0 60 273-332 48-109 (113)
225 3qe1_A Sorting nexin-27, G pro 98.7 2.7E-08 9.2E-13 87.6 8.8 60 272-332 42-103 (107)
226 3cbz_A Dishevelled-2; PDZ doma 98.7 1.9E-08 6.4E-13 89.5 7.9 61 272-332 32-97 (108)
227 1z87_A Alpha-1-syntrophin; pro 98.7 2.8E-08 9.5E-13 102.6 10.2 62 273-334 103-166 (263)
228 3r68_A Na(+)/H(+) exchange reg 98.7 2.7E-08 9.2E-13 85.5 8.3 59 273-332 29-89 (95)
229 2db5_A INAD-like protein; PDZ 98.7 2.3E-08 7.9E-13 91.2 8.1 61 272-332 53-116 (128)
230 1wfv_A Membrane associated gua 98.7 1.9E-08 6.5E-13 87.7 7.2 61 274-334 37-99 (103)
231 1wg6_A Hypothetical protein (r 98.7 1.5E-08 5.1E-13 92.9 6.7 61 272-332 54-123 (127)
232 2koj_A Partitioning defective 98.7 3.9E-08 1.3E-12 87.1 9.1 63 273-335 39-105 (111)
233 2la8_A Inactivation-NO-after-p 98.7 3.7E-08 1.3E-12 87.7 9.0 63 273-335 25-89 (106)
234 1v62_A KIAA1719 protein; struc 98.7 2.8E-08 9.7E-13 89.6 8.1 60 274-333 43-104 (117)
235 2dc2_A GOPC, golgi associated 98.7 2.8E-08 9.5E-13 87.6 7.9 62 274-335 36-99 (103)
236 1ujd_A KIAA0559 protein; PDZ d 98.7 2.2E-08 7.4E-13 90.2 7.2 63 272-334 48-112 (117)
237 2eei_A PDZ domain-containing p 98.7 4.7E-08 1.6E-12 85.9 9.1 60 273-333 32-93 (106)
238 1mfg_A ERB-B2 interacting prot 98.7 4.2E-08 1.5E-12 84.5 8.5 59 271-331 33-93 (95)
239 2v90_A PDZ domain-containing p 98.7 2.8E-08 9.6E-13 85.8 7.1 60 273-333 30-91 (96)
240 1um7_A Synapse-associated prot 98.7 4.1E-08 1.4E-12 86.9 8.0 64 273-336 39-104 (113)
241 2csj_A TJP2 protein; PDZ domai 98.7 3.4E-08 1.2E-12 88.7 7.5 60 272-333 45-106 (117)
242 1wfg_A Regulating synaptic mem 98.7 3.8E-08 1.3E-12 90.7 7.9 61 272-332 64-128 (131)
243 2yuy_A RHO GTPase activating p 98.7 8.8E-08 3E-12 87.3 10.2 61 271-332 59-121 (126)
244 1uju_A Scribble; PDZ domain, c 98.7 2E-08 6.7E-13 89.3 5.7 61 271-331 42-104 (111)
245 1n7t_A 99-MER peptide of densi 98.7 6.6E-08 2.3E-12 84.6 8.9 59 271-331 41-101 (103)
246 2d90_A PDZ domain containing p 98.6 6.7E-08 2.3E-12 84.5 8.6 60 273-333 30-91 (102)
247 1ujv_A Membrane associated gua 98.6 6.6E-08 2.3E-12 84.3 8.2 58 274-332 33-92 (96)
248 1qav_A Alpha-1 syntrophin (res 98.6 6.4E-08 2.2E-12 82.6 7.8 58 273-330 30-89 (90)
249 3hpk_A Protein interacting wit 98.6 7.6E-08 2.6E-12 87.4 8.7 60 273-332 45-106 (125)
250 2qkv_A Inactivation-NO-after-p 98.6 4.7E-08 1.6E-12 84.9 7.0 59 273-331 31-91 (96)
251 1wif_A RSGI RUH-020, riken cDN 98.6 1E-07 3.5E-12 88.1 9.5 57 274-330 50-110 (126)
252 1tp5_A Presynaptic density pro 98.6 5.2E-08 1.8E-12 87.4 7.2 64 273-336 38-103 (119)
253 4e34_A Golgi-associated PDZ an 98.6 7.5E-08 2.6E-12 81.5 7.7 57 273-329 28-86 (87)
254 2o2t_A Multiple PDZ domain pro 98.6 6.1E-08 2.1E-12 86.8 7.5 62 272-333 48-112 (117)
255 2jre_A C60-1 PDZ domain peptid 98.6 8.7E-08 3E-12 84.5 8.4 61 272-332 43-105 (108)
256 2yt7_A Amyloid beta A4 precurs 98.6 7.9E-08 2.7E-12 84.3 7.7 59 273-331 37-99 (101)
257 2kpk_A Membrane-associated gua 98.6 1.2E-07 4E-12 86.9 8.9 60 273-332 43-106 (129)
258 2kom_A Partitioning defective 98.6 1.9E-07 6.6E-12 84.7 10.2 59 273-331 58-120 (121)
259 2dls_A PDZ-rhogef, RHO guanine 98.6 1.3E-07 4.6E-12 81.4 8.4 57 274-332 30-88 (93)
260 1ihj_A INAD; intermolecular di 98.6 1E-07 3.5E-12 82.4 7.6 60 272-331 36-97 (98)
261 1wi2_A Riken cDNA 2700099C19; 98.6 2E-07 6.7E-12 82.0 9.5 57 273-331 41-99 (104)
262 1nf3_C PAR-6B; semi-CRIB motif 98.6 1.1E-07 3.6E-12 87.1 7.9 60 273-332 65-126 (128)
263 3bpu_A Membrane-associated gua 98.6 1.7E-07 5.7E-12 79.7 8.2 57 273-331 27-86 (88)
264 1whd_A RGS3, regulator of G-pr 98.5 2.1E-07 7.1E-12 81.4 9.0 56 275-331 38-95 (100)
265 2qbw_A PDZ-fibronectin fusion 98.5 1.9E-07 6.6E-12 89.9 9.5 57 271-329 22-80 (195)
266 2fcf_A Multiple PDZ domain pro 98.5 1.8E-07 6.1E-12 81.6 8.3 61 272-332 38-100 (103)
267 3l4f_D SH3 and multiple ankyri 98.5 1.6E-07 5.5E-12 86.7 8.3 59 272-331 64-124 (132)
268 1v6b_A Harmonin isoform A1; st 98.5 1.2E-07 4.1E-12 85.7 7.3 58 274-331 44-107 (118)
269 4fln_A Protease DO-like 2, chl 98.5 7.1E-07 2.4E-11 100.5 15.0 174 119-328 277-470 (539)
270 1uit_A Human discs large 5 pro 98.5 1.4E-07 4.9E-12 84.4 7.6 62 273-335 42-105 (117)
271 2edv_A FERM and PDZ domain-con 98.5 1.5E-07 5.3E-12 81.8 7.5 56 274-331 32-89 (96)
272 2iwn_A Multiple PDZ domain pro 98.5 2.1E-07 7.3E-12 79.7 8.0 60 272-331 32-93 (97)
273 2iwq_A Multiple PDZ domain pro 98.5 2.6E-07 8.9E-12 84.3 9.0 61 272-332 58-120 (123)
274 1m5z_A GRIP, AMPA receptor int 98.5 2.9E-07 9.9E-12 78.5 8.7 57 273-330 32-90 (91)
275 2ejy_A 55 kDa erythrocyte memb 98.5 1.6E-07 5.6E-12 82.8 7.3 58 273-330 36-95 (97)
276 2q3g_A PDZ and LIM domain prot 98.5 1.9E-07 6.4E-12 79.5 7.5 59 273-332 27-87 (89)
277 2dmz_A INAD-like protein; PDZ 98.5 1.7E-07 5.7E-12 85.4 7.5 62 272-333 45-108 (129)
278 2uzc_A Human pdlim5, PDZ and L 98.5 2.8E-07 9.5E-12 78.1 8.1 58 273-331 27-86 (88)
279 3nfk_A Tyrosine-protein phosph 98.5 1.9E-07 6.4E-12 82.2 7.0 57 273-329 43-106 (107)
280 3ngh_A PDZ domain-containing p 98.5 3.7E-07 1.3E-11 80.2 8.8 59 273-332 26-86 (106)
281 1rgw_A ZAsp protein; PDZ, cyph 98.5 2.6E-07 8.8E-12 77.7 7.5 58 273-331 25-84 (85)
282 2cs5_A Tyrosine-protein phosph 98.5 1.5E-07 5.1E-12 84.6 6.1 59 273-331 41-106 (119)
283 2rcz_A Tight junction protein 98.5 3.4E-07 1.2E-11 75.7 7.8 58 273-330 21-80 (81)
284 2e7k_A Maguk P55 subfamily mem 98.5 2.8E-07 9.6E-12 79.4 7.3 57 273-330 29-87 (91)
285 3khf_A Microtubule-associated 98.5 3.8E-07 1.3E-11 79.1 8.1 58 274-332 35-94 (99)
286 1x6d_A Interleukin-16; PDZ dom 98.5 2.4E-07 8.1E-12 83.3 7.0 61 272-332 41-104 (119)
287 2pa1_A PDZ and LIM domain prot 98.5 4.2E-07 1.4E-11 77.0 8.1 59 273-332 26-86 (87)
288 1q3o_A Shank1; PDZ, GKAP, pept 98.4 4.6E-07 1.6E-11 80.2 8.6 59 272-331 44-104 (109)
289 3cyy_A Tight junction protein 98.4 4.1E-07 1.4E-11 77.5 7.8 61 273-333 23-85 (92)
290 2edp_A Fragment, shroom family 98.4 2.3E-07 7.9E-12 81.1 6.3 59 274-333 36-96 (100)
291 2w4f_A Protein LAP4; structura 98.4 5.8E-07 2E-11 77.4 8.7 60 272-332 33-94 (97)
292 2gzv_A PRKCA-binding protein; 98.4 6.1E-07 2.1E-11 80.8 9.1 58 273-330 50-109 (114)
293 1uew_A Membrane associated gua 98.4 3.2E-07 1.1E-11 82.0 7.2 60 274-333 44-105 (114)
294 2pkt_A PDZ and LIM domain prot 98.4 5.1E-07 1.7E-11 77.1 7.9 59 273-332 27-87 (91)
295 2ego_A General receptor for ph 98.4 5.1E-07 1.7E-11 78.1 7.8 58 272-330 36-95 (96)
296 2jxo_A Ezrin-radixin-moesin-bi 98.4 3.2E-07 1.1E-11 79.4 6.4 58 273-331 33-93 (98)
297 1vae_A Rhophilin 2, rhophilin, 98.4 5.2E-07 1.8E-11 81.1 7.9 59 275-334 38-99 (111)
298 3sfj_A TAX1-binding protein 3; 98.4 7.1E-07 2.4E-11 77.9 8.6 59 271-330 43-104 (104)
299 1x5q_A LAP4 protein; PDZ domai 98.4 8.3E-07 2.8E-11 78.5 9.1 62 271-333 44-107 (110)
300 2vsv_A Rhophilin-2; scaffold p 98.4 5.9E-07 2E-11 80.8 8.0 57 274-331 45-104 (109)
301 2eeg_A PDZ and LIM domain prot 98.4 8.1E-07 2.8E-11 76.5 8.5 59 273-332 32-92 (94)
302 2eeh_A PDZ domain-containing p 98.4 1E-06 3.4E-11 76.8 8.5 59 273-333 36-96 (100)
303 1wf7_A Enigma homologue protei 98.4 7.4E-07 2.5E-11 78.0 7.6 60 274-334 30-91 (103)
304 1v5q_A GRIP1 homolog, glutamat 98.4 9.9E-07 3.4E-11 79.9 8.5 61 273-333 45-109 (122)
305 2h2b_A Tight junction protein 98.3 1.2E-06 4.2E-11 76.9 8.7 60 272-333 38-99 (107)
306 1vb7_A PDZ and LIM domain 2; P 98.3 7.8E-07 2.7E-11 76.6 6.9 59 273-332 30-90 (94)
307 2edz_A PDZ domain-containing p 98.3 1.1E-06 3.9E-11 78.3 7.7 60 273-333 38-99 (114)
308 2vz5_A TAX1-binding protein 3; 98.3 1.8E-06 6.1E-11 80.5 9.1 62 272-334 63-127 (139)
309 3tsv_A Tight junction protein 98.3 1.1E-06 3.7E-11 80.3 7.5 62 273-335 51-116 (124)
310 1y7n_A Amyloid beta A4 precurs 98.3 1.5E-06 5E-11 75.3 7.6 54 276-330 34-89 (90)
311 1v5l_A PDZ and LIM domain 3; a 98.3 8.1E-07 2.8E-11 77.9 6.0 61 274-335 30-92 (103)
312 3suz_A Amyloid beta A4 precurs 98.3 1.2E-07 4E-12 102.5 0.4 68 100-178 306-373 (388)
313 3k1r_A Harmonin; protein-prote 98.3 1.2E-06 4E-11 85.4 7.1 59 273-333 110-170 (192)
314 1b8q_A Protein (neuronal nitri 98.3 2.7E-06 9.2E-11 77.2 8.9 62 273-334 33-97 (127)
315 3shw_A Tight junction protein 98.2 8E-07 2.7E-11 98.5 6.3 63 273-336 23-89 (468)
316 2kjp_A Uncharacterized protein 98.2 6.7E-07 2.3E-11 77.7 3.7 58 120-181 2-61 (91)
317 2pzd_A Serine protease HTRA2; 98.2 2.8E-06 9.6E-11 75.4 7.4 59 119-181 35-93 (113)
318 2kjd_A Sodium/hydrogen exchang 98.2 3.3E-06 1.1E-10 76.5 7.9 60 273-333 33-95 (128)
319 2z17_A Pleckstrin homology SEC 98.2 2.1E-06 7.1E-11 75.3 6.3 55 272-327 47-103 (104)
320 2kl1_A YLBL protein; structure 98.2 2E-06 6.7E-11 74.8 5.9 59 119-181 5-65 (94)
321 1qau_A Neuronal nitric oxide s 98.2 5.6E-06 1.9E-10 73.3 8.7 62 273-334 26-90 (112)
322 1w9e_A Syntenin 1; cell adhesi 98.2 7.7E-06 2.6E-10 77.4 10.2 75 91-176 89-163 (166)
323 2eaq_A LIM domain only protein 98.2 3.2E-06 1.1E-10 71.8 6.8 58 273-331 28-89 (90)
324 2lob_A Golgi-associated PDZ an 97.4 3.1E-07 1.1E-11 82.6 0.0 56 273-328 53-110 (112)
325 1wh1_A KIAA1095 protein; PDZ d 98.1 5.7E-06 1.9E-10 75.1 7.7 62 272-335 47-111 (124)
326 1uf1_A KIAA1526 protein; PDZ d 98.1 1.2E-05 4E-10 73.1 9.7 60 273-334 46-107 (128)
327 2d8i_A T-cell lymphoma invasio 98.1 5E-06 1.7E-10 75.2 6.8 58 274-334 45-104 (114)
328 2l97_A HTRA, putative serine p 98.1 5.9E-06 2E-10 76.3 7.3 60 119-182 57-118 (134)
329 2krg_A Na(+)/H(+) exchange reg 98.1 2.7E-06 9.3E-11 85.3 5.4 60 273-333 33-95 (216)
330 3i18_A LMO2051 protein; alpha- 98.1 6.2E-06 2.1E-10 72.2 6.9 59 119-181 7-67 (100)
331 3tsz_A Tight junction protein 98.1 4.1E-06 1.4E-10 90.7 7.0 65 272-337 30-98 (391)
332 1uez_A KIAA1526 protein; PDZ d 98.1 3.3E-06 1.1E-10 73.5 5.0 58 273-332 35-94 (101)
333 1fc6_A Photosystem II D1 prote 98.0 1.2E-05 4E-10 86.5 9.6 76 101-180 84-160 (388)
334 3qik_A Phosphatidylinositol 3, 98.0 9.9E-06 3.4E-10 72.5 7.1 56 274-330 40-100 (101)
335 1x5n_A Harmonin; PDZ domain, u 98.0 8.8E-06 3E-10 72.3 6.4 58 273-332 41-101 (114)
336 2p3w_A Probable serine proteas 97.9 1.2E-05 4.2E-10 71.2 6.2 59 119-181 35-93 (112)
337 2zpm_A Regulator of sigma E pr 97.9 9.2E-06 3.2E-10 69.1 5.1 59 120-181 5-64 (91)
338 2i6v_A General secretion pathw 97.9 1.1E-05 3.7E-10 68.8 4.7 58 120-180 20-79 (87)
339 3kzd_A TIAM-1, T-lymphoma inva 97.9 3.3E-05 1.1E-09 68.1 7.7 54 273-329 35-90 (94)
340 2yub_A LIMK-2, LIM domain kina 97.8 2.1E-05 7.2E-10 71.4 6.5 61 272-333 43-107 (118)
341 4fgm_A Aminopeptidase N family 97.8 2.7E-05 9.4E-10 88.6 8.9 74 100-183 483-558 (597)
342 3id1_A Regulator of sigma E pr 97.8 3.1E-05 1E-09 67.4 6.8 56 122-180 5-62 (95)
343 2i4s_A General secretion pathw 97.8 4.4E-05 1.5E-09 67.3 7.1 58 120-180 38-97 (105)
344 1y8t_A Hypothetical protein RV 97.8 3.7E-05 1.3E-09 80.3 7.7 60 119-181 242-304 (324)
345 3k50_A Putative S41 protease; 97.8 2.2E-05 7.5E-10 85.5 6.0 75 101-180 73-147 (403)
346 2kl1_A YLBL protein; structure 97.7 4.1E-05 1.4E-09 66.4 5.9 59 272-334 4-66 (94)
347 4a8c_A Periplasmic PH-dependen 97.7 7.8E-05 2.7E-09 81.5 9.1 60 119-181 363-422 (436)
348 3stj_A Protease DEGQ; serine p 97.7 5.5E-05 1.9E-09 80.4 7.6 62 119-183 263-326 (345)
349 1te0_A Protease DEGS; two doma 97.7 8.2E-05 2.8E-09 77.7 8.4 61 119-182 244-306 (318)
350 2pzd_A Serine protease HTRA2; 97.6 0.00015 5E-09 64.2 8.6 59 272-334 34-94 (113)
351 2kjp_A Uncharacterized protein 97.6 4E-05 1.4E-09 66.4 4.8 57 274-334 2-62 (91)
352 3rle_A Golgi reassembly-stacki 97.6 5.1E-05 1.7E-09 74.8 6.1 74 102-179 95-170 (209)
353 3pv2_A DEGQ; trypsin fold, PDZ 97.5 9E-05 3.1E-09 81.5 5.9 60 119-181 386-445 (451)
354 3i18_A LMO2051 protein; alpha- 97.5 0.00025 8.6E-09 61.9 7.6 59 272-334 6-68 (100)
355 2hga_A Conserved protein MTH13 97.4 0.00012 4.1E-09 67.2 5.2 57 119-180 25-83 (125)
356 1lcy_A HTRA2 serine protease; 97.4 0.00018 6.1E-09 75.5 7.0 59 119-181 256-314 (325)
357 2p3w_A Probable serine proteas 97.4 0.00039 1.3E-08 61.5 7.6 58 272-333 34-93 (112)
358 3qo6_A Protease DO-like 1, chl 97.4 0.00013 4.4E-09 77.3 5.3 62 119-183 251-325 (348)
359 2i6v_A General secretion pathw 97.3 0.0003 1E-08 59.7 6.2 56 274-332 20-79 (87)
360 2l97_A HTRA, putative serine p 97.3 0.00062 2.1E-08 62.7 8.3 58 272-333 56-117 (134)
361 2i4s_A General secretion pathw 97.2 0.00094 3.2E-08 58.7 8.2 55 275-332 39-97 (105)
362 2zpm_A Regulator of sigma E pr 97.2 0.00071 2.4E-08 57.3 6.8 55 276-333 7-64 (91)
363 1fc6_A Photosystem II D1 prote 97.1 0.00094 3.2E-08 71.7 8.1 59 273-332 99-160 (388)
364 3num_A Serine protease HTRA1; 97.0 9.1E-05 3.1E-09 77.8 0.0 59 119-181 254-312 (332)
365 3id1_A Regulator of sigma E pr 96.9 0.0012 4E-08 57.3 6.1 54 276-332 5-62 (95)
366 1ky9_A Protease DO, DEGP, HTRA 96.8 0.00018 6.1E-09 79.1 0.0 59 119-180 383-441 (448)
367 3stj_A Protease DEGQ; serine p 96.8 0.0023 7.9E-08 67.9 8.1 60 272-334 262-325 (345)
368 1k32_A Tricorn protease; prote 96.8 0.0022 7.5E-08 75.9 8.7 70 101-179 736-815 (1045)
369 1te0_A Protease DEGS; two doma 96.6 0.0026 8.8E-08 66.3 7.2 60 272-334 243-306 (318)
370 2hga_A Conserved protein MTH13 96.6 0.0017 5.7E-08 59.5 4.8 57 271-332 23-83 (125)
371 1lcy_A HTRA2 serine protease; 96.5 0.0051 1.7E-07 64.4 7.9 59 272-334 255-315 (325)
372 1y8t_A Hypothetical protein RV 96.3 0.004 1.4E-07 64.9 5.8 58 272-332 241-303 (324)
373 4fgm_A Aminopeptidase N family 96.0 0.0068 2.3E-07 69.1 6.6 58 273-334 496-557 (597)
374 3qo6_A Protease DO-like 1, chl 95.9 0.0057 1.9E-07 64.7 5.0 59 273-334 251-324 (348)
375 3k50_A Putative S41 protease; 95.9 0.0035 1.2E-07 68.2 3.4 55 274-332 91-147 (403)
376 3num_A Serine protease HTRA1; 95.5 0.0022 7.5E-08 67.3 0.0 58 272-333 253-312 (332)
377 1k32_A Tricorn protease; prote 94.0 0.062 2.1E-06 63.6 7.0 56 273-331 748-815 (1045)
378 4fln_A Protease DO-like 2, chl 92.6 0.15 5.1E-06 57.5 6.7 55 118-175 414-469 (539)
379 3fxd_A Protein ICMQ; helix bun 48.3 12 0.00042 30.0 2.9 22 459-480 2-23 (57)
No 1
>3gsl_A Disks large homolog 4; PDZ domain, tandem, PSD-95, DLG4, SAP-90, GLUR6, cell juncti membrane, lipoprotein, membrane, palmitate, phosphoprotein; 2.05A {Rattus norvegicus} PDB: 3zrt_A 2ka9_A
Probab=99.90 E-value=4e-23 Score=198.34 Aligned_cols=182 Identities=25% Similarity=0.343 Sum_probs=143.4
Q ss_pred ceEEEEEecCCCcccEEEEeccCCCC--CcccEEEEEecCCChhcccCccccCCeeeecCCeecCCCCHHHHHHHHHcCC
Q psy2533 91 MKSHSVRDMLRQEAKLSEMSEEGAGQ--DRLGIYIKSVVKGGAADANGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTG 168 (684)
Q Consensus 91 ~~~V~v~k~~~~GLGfsI~GG~~~~~--~~~gIfIs~V~pGGpA~r~GrLqvGDrILaVNG~sl~g~sh~eAV~lLk~sg 168 (684)
...+++.+ .+.+|||+|.+|.+.+. ...++||..|.|+|||+++|+|++||+|++|||.++.++++.+++.+++..+
T Consensus 6 ~~~v~l~~-~~~~lG~~i~~g~~~~~~~~~~g~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~g 84 (196)
T 3gsl_A 6 YEEITLER-GNSGLGFSIAGGTDNPHIGDDPSIFITKIIPGGAAAQDGRLRVNDSILFVNEVDVREVTHSAAVEALKEAG 84 (196)
T ss_dssp EEEEEEEC-BTTBSSEEEECCTTSCTTSSCCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTSC
T ss_pred EEEEEEEE-CCCCCCEEEEcccCCcccCCCCCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC
Confidence 45566665 46789999999977542 3568999999999999999999999999999999999999999999999999
Q ss_pred CEEEEEEEecCccccccccccCCCCCccccCCCccccccccccccccccccccccCCCCCCCCCCCCCCCCCCccccccc
Q psy2533 169 PIVTLEIAKQGAIYHGLATLLSQPSPVMTRGQVKTYESTISVQQRKERSSQNLHDMNNGVGGSHHPAPGPGSGMNHHPVV 248 (684)
Q Consensus 169 ~~V~LvV~R~~~~~~~~stl~s~psP~~~s~~~~~ses~ls~~~~~~~~sv~L~k~s~GlGfSi~~~~g~G~Gi~ikpIv 248 (684)
..|.|+|.|..+..... ..+.+.+...++|+++.... +..
T Consensus 85 ~~v~l~v~r~~~~~~~~-------------------------------~~v~l~~~~~~lG~~~~~~~----~~~----- 124 (196)
T 3gsl_A 85 SIVRLYVMRRKPPAEKV-------------------------------MEIKLIKGPKGLGFSIAGGV----GNQ----- 124 (196)
T ss_dssp SEEEEEEEEECCCCEEE-------------------------------EEEEEEEBTTBSCEEEEESB----TSC-----
T ss_pred CcEEEEEEecCCCcccc-------------------------------EEEEEecCCCCceEEEEccC----CCc-----
Confidence 99999999865321100 01122333446776664110 000
Q ss_pred ccccCCCCCCCCCCCCCCCCCCCCCCcEEEecc--hhhhhcCCCCCCCEEEEECCEecCCCCHHHHHHHHHhCCCeEEEE
Q psy2533 249 SRQASTPSLPQASPYPAPAPAPADPERFYQNLS--VYRNQNGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGPIVTLE 326 (684)
Q Consensus 249 ~~~~~t~slp~~sl~~gs~~~~~d~GIFV~sI~--GaAardGrLr~GDqIL~VNG~sl~g~Th~eAv~lLk~sg~~VtL~ 326 (684)
..+...|+||..|. ++|++.|+|++||+|++|||+++.++++.+++.+|+.++..|.|.
T Consensus 125 -------------------~~~~~~gv~V~~V~~gs~A~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~v~l~ 185 (196)
T 3gsl_A 125 -------------------HIPGDNSIYVTKIIEGGAAHKDGRLQIGDKILAVNSVGLEDVMHEDAVAALKNTYDVVYLK 185 (196)
T ss_dssp -------------------SBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCBHHHHHHHHHSCCEEEEEE
T ss_pred -------------------CCCCCCCEEEEEECCCChHHhcCCCCCCCEEEEECCCcCCCCCHHHHHHHHHcCCCeEEEE
Confidence 00124589999997 789999999999999999999999999999999999999999999
Q ss_pred EEeCCc
Q psy2533 327 IAKQGA 332 (684)
Q Consensus 327 V~R~~~ 332 (684)
|.|++.
T Consensus 186 v~R~~~ 191 (196)
T 3gsl_A 186 VAKPSN 191 (196)
T ss_dssp EEEESC
T ss_pred EeCCCC
Confidence 999764
No 2
>3r0h_A INAD, inactivation-NO-after-potential D protein; protein-protein complex, PDZ domain, peptide binding protein; 2.60A {Drosophila melanogaster}
Probab=99.90 E-value=1.3e-22 Score=197.92 Aligned_cols=177 Identities=18% Similarity=0.209 Sum_probs=139.4
Q ss_pred CCceEEEEEecCCCcccEEEEeccCCCCCcccEEEEEecCCChhcccCccccCCeeeecCCeecCC--CCHHHHHHHHHc
Q psy2533 89 SSMKSHSVRDMLRQEAKLSEMSEEGAGQDRLGIYIKSVVKGGAADANGRLQAGDQLLKVDGQSLVG--ITQEKAAEYLVR 166 (684)
Q Consensus 89 s~~~~V~v~k~~~~GLGfsI~GG~~~~~~~~gIfIs~V~pGGpA~r~GrLqvGDrILaVNG~sl~g--~sh~eAV~lLk~ 166 (684)
.....+.+.+ .+.+|||+|.+|.+.... .++||..|.++|||+++|+|++||+|++|||.++.+ ++|.+++.+++.
T Consensus 17 ~~~~~v~~~~-~~~~lG~~i~~g~~~~~~-~g~~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~~~~~~ 94 (206)
T 3r0h_A 17 NKKILIELKV-EKKPMGVIVCGGKNNHVT-TGCVITHVYPEGQVAADKRLKIFDHICDINGTPIHVGSMTTLKVHQLFHT 94 (206)
T ss_dssp TSCEEEEEEC-TTSCCCEEEECCSSSSCC-SCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECCGGGSCHHHHHHHHHS
T ss_pred CCEEEEEEEe-CCCCcCEEEecccCCCCC-CCeEEEEECCCChHHhcCCCCCCCEEEEECCEEcCCCccCHHHHHHHHHh
Confidence 3455666665 578999999998775432 479999999999999999999999999999999999 999999999999
Q ss_pred CCCE-EEEEEEecCccccccccccCCCCCccccCCCcccccccccccccccccccccc-CCCCCCCCCCCCCCCCCCccc
Q psy2533 167 TGPI-VTLEIAKQGAIYHGLATLLSQPSPVMTRGQVKTYESTISVQQRKERSSQNLHD-MNNGVGGSHHPAPGPGSGMNH 244 (684)
Q Consensus 167 sg~~-V~LvV~R~~~~~~~~stl~s~psP~~~s~~~~~ses~ls~~~~~~~~sv~L~k-~s~GlGfSi~~~~g~G~Gi~i 244 (684)
.+.. |.|+|.|........ + .+.+.+ ...++||.+.
T Consensus 95 ~~~~~v~l~v~R~~~~~~~~----------------------~---------~v~l~~~~~~~lG~~~~----------- 132 (206)
T 3r0h_A 95 TYEKAVTLTVFRADPPELEK----------------------F---------NVDLMKKAGKELGLSLS----------- 132 (206)
T ss_dssp CCSSEEEEEEECCSSCCEEE----------------------E---------EEEEECCTTCCCCEEEE-----------
T ss_pred cCCCceEEEEEecccCCCcE----------------------E---------EEEEecCCCCccCeEEE-----------
Confidence 8888 999999875421100 0 011111 1123444432
Q ss_pred ccccccccCCCCCCCCCCCCCCCCCCCCCCcEEEecc--hhhhhcCCCCCCCEEEEECCEecCCCCHHHHHHHHHhCCCe
Q psy2533 245 HPVVSRQASTPSLPQASPYPAPAPAPADPERFYQNLS--VYRNQNGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGPI 322 (684)
Q Consensus 245 kpIv~~~~~t~slp~~sl~~gs~~~~~d~GIFV~sI~--GaAardGrLr~GDqIL~VNG~sl~g~Th~eAv~lLk~sg~~ 322 (684)
+...|+||..|. ++|++.|+|++||+|++|||+++.++++.+++.+|+..+..
T Consensus 133 -------------------------~~~~gv~V~~V~~gs~A~~aG~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~~ 187 (206)
T 3r0h_A 133 -------------------------PNEIGCTIADLIQGQYPEIDSKLQRGDIITKFNGDALEGLPFQVCYALFKGANGK 187 (206)
T ss_dssp -------------------------ECSSCEEEEEECTTSCHHHHHHCCTTCEEEEETTEECTTCCHHHHHHHHHTCCSE
T ss_pred -------------------------cCCceEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCe
Confidence 012478999987 78999988999999999999999999999999999999999
Q ss_pred EEEEEEeCCccc
Q psy2533 323 VTLEIAKQGAIY 334 (684)
Q Consensus 323 VtL~V~R~~~~~ 334 (684)
|.|.|.|+....
T Consensus 188 v~L~V~R~~~~~ 199 (206)
T 3r0h_A 188 VSMEVTRPKPTL 199 (206)
T ss_dssp EEEEEEEECCCC
T ss_pred EEEEEEeCCCCC
Confidence 999999965433
No 3
>2xkx_A Disks large homolog 4; structural protein, scaffold protein, membrane associated GU kinase; 22.9A {Rattus norvegicus}
Probab=99.86 E-value=9.6e-21 Score=218.82 Aligned_cols=186 Identities=26% Similarity=0.353 Sum_probs=146.9
Q ss_pred CCceEEEEEecCCCcccEEEEeccCCCC--CcccEEEEEecCCChhcccCccccCCeeeecCCeecCCCCHHHHHHHHHc
Q psy2533 89 SSMKSHSVRDMLRQEAKLSEMSEEGAGQ--DRLGIYIKSVVKGGAADANGRLQAGDQLLKVDGQSLVGITQEKAAEYLVR 166 (684)
Q Consensus 89 s~~~~V~v~k~~~~GLGfsI~GG~~~~~--~~~gIfIs~V~pGGpA~r~GrLqvGDrILaVNG~sl~g~sh~eAV~lLk~ 166 (684)
....+|.+.+.. +||||+|.||.+... ...|+||..|.+||||+++|+|++||+|++|||.++.+++|.+++.+|+.
T Consensus 58 ~~~~~v~l~k~~-~glGf~i~gg~~~~~~~~~~g~~V~~v~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~ 136 (721)
T 2xkx_A 58 MEYEEITLERGN-SGLGFSIAGGTDNPHIGDDPSIFITKIIPGGAAAQDGRLRVNDSILFVNEVDVREVTHSAAVEALKE 136 (721)
T ss_pred ceEEEEEEEeCC-CCCCEEEeCCcCCcccCCCCCeEEEEeCCCCHHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHhhc
Confidence 345667776655 699999999987542 35689999999999999999999999999999999999999999999999
Q ss_pred CCCEEEEEEEecCccccccccccCCCCCccccCCCccccccccccccccccccccccCCCCCCCCCCCCCCCCCCccccc
Q psy2533 167 TGPIVTLEIAKQGAIYHGLATLLSQPSPVMTRGQVKTYESTISVQQRKERSSQNLHDMNNGVGGSHHPAPGPGSGMNHHP 246 (684)
Q Consensus 167 sg~~V~LvV~R~~~~~~~~stl~s~psP~~~s~~~~~ses~ls~~~~~~~~sv~L~k~s~GlGfSi~~~~g~G~Gi~ikp 246 (684)
++..|.|+|.|..+... .. ..+.+.+...++||++..+. +...
T Consensus 137 ~g~~v~l~v~R~~~~~~----------------------~~---------~~v~l~k~~~~lG~~i~~~~----~~~~-- 179 (721)
T 2xkx_A 137 AGSIVRLYVMRRKPPAE----------------------KV---------MEIKLIKGPKGLGFSIAGGV----GNQH-- 179 (721)
T ss_pred cccccceEEEecccccc----------------------cc---------eeeeeeeecCCCceeeccCC----Cccc--
Confidence 99999999988753210 00 01222233456777765211 1000
Q ss_pred ccccccCCCCCCCCCCCCCCCCCCCCCCcEEEecc--hhhhhcCCCCCCCEEEEECCEecCCCCHHHHHHHHHhCCCeEE
Q psy2533 247 VVSRQASTPSLPQASPYPAPAPAPADPERFYQNLS--VYRNQNGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGPIVT 324 (684)
Q Consensus 247 Iv~~~~~t~slp~~sl~~gs~~~~~d~GIFV~sI~--GaAardGrLr~GDqIL~VNG~sl~g~Th~eAv~lLk~sg~~Vt 324 (684)
.+...|+||..|. ++|++.|+|++||+|++|||+.+.+++|.+++.+|+..+..|.
T Consensus 180 ----------------------~~~~~gv~V~~V~~gs~A~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~v~ 237 (721)
T 2xkx_A 180 ----------------------IPGDNSIYVTKIIEGGAAHKDGRLQIGDKILAVNSVGLEDVMHEDAVAALKNTYDVVY 237 (721)
T ss_pred ----------------------cCCCCceEEEEeCCCCchhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHHHcCCCeEE
Confidence 0124689999997 7899998899999999999999999999999999999999999
Q ss_pred EEEEeCCccc
Q psy2533 325 LEIAKQGAIY 334 (684)
Q Consensus 325 L~V~R~~~~~ 334 (684)
|.|.|.+..+
T Consensus 238 l~V~R~g~~~ 247 (721)
T 2xkx_A 238 LKVAKPSNAY 247 (721)
T ss_pred EEEEeCCccc
Confidence 9999987543
No 4
>2qt5_A Glutamate receptor-interacting protein 1; PDZ-peptide complex, PDZ tandem, alternative splicing, cell junction, cytoplasm; 2.30A {Rattus norvegicus}
Probab=99.85 E-value=1.7e-20 Score=182.89 Aligned_cols=189 Identities=20% Similarity=0.225 Sum_probs=142.4
Q ss_pred CceEEEEEecCCCcccEEEEeccCCCCCcccEEEEEecCCChhcccCccccCCeeeecCCeecCCCCHHHHHHHHHcCCC
Q psy2533 90 SMKSHSVRDMLRQEAKLSEMSEEGAGQDRLGIYIKSVVKGGAADANGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGP 169 (684)
Q Consensus 90 ~~~~V~v~k~~~~GLGfsI~GG~~~~~~~~gIfIs~V~pGGpA~r~GrLqvGDrILaVNG~sl~g~sh~eAV~lLk~sg~ 169 (684)
..+.|.+.++.+.+|||+|.+|.+.. .+++|..|.++|||+++|.|++||+|++|||.++.+++|.+++.+++..+.
T Consensus 7 ~~~~v~l~~~~~~~lG~~i~~~~~~~---~~~~V~~v~~~spA~~aggl~~GD~I~~vng~~v~~~~~~~~~~~~~~~g~ 83 (200)
T 2qt5_A 7 GSTVVELMKKEGTTLGLTVSGGIDKD---GKPRVSNLRQGGIAARSDQLDVGDYIKAVNGINLAKFRHDEIISLLKNVGE 83 (200)
T ss_dssp EEEEEEEECCTTCCCCEEEECCTTSS---SCSEEEEECTTSHHHHTTSCCTTCEEEEETTEECTTSCHHHHHHHHHTCCS
T ss_pred CCEEEEEEeCCCCCCCEEEecccCCC---CCeEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCC
Confidence 45678888888999999999886643 468999999999999993499999999999999999999999999999999
Q ss_pred EEEEEEEecCccccccccccCCCCCccccCCCccccccccccccccccccccccCCCCCCCCCCCCCCCCCCcccccccc
Q psy2533 170 IVTLEIAKQGAIYHGLATLLSQPSPVMTRGQVKTYESTISVQQRKERSSQNLHDMNNGVGGSHHPAPGPGSGMNHHPVVS 249 (684)
Q Consensus 170 ~V~LvV~R~~~~~~~~stl~s~psP~~~s~~~~~ses~ls~~~~~~~~sv~L~k~s~GlGfSi~~~~g~G~Gi~ikpIv~ 249 (684)
.|.|+|.|..+... ..+.. .....+ .+.+.+...++|+.+..+.. +.
T Consensus 84 ~v~l~v~R~~~~~~-------------~~g~~-~~~~~~---------~v~l~~~~~~lG~~l~~g~~--------~~-- 130 (200)
T 2qt5_A 84 RVVLEVEYELPPVS-------------IQGSS-VMFRTV---------EVTLHKEGNTFGFVIRGGAH--------DD-- 130 (200)
T ss_dssp EEEEEEEEECCCCC-------------CCCSS-EEEEEE---------EEEEECBTTBCSEEEEEECC--------SS--
T ss_pred eEEEEEeccCCCcc-------------cCCCc-cceeEE---------EEEEecCCCCeEEEEECCCC--------CC--
Confidence 99999988653100 00000 000001 11222334556665531000 00
Q ss_pred cccCCCCCCCCCCCCCCCCCCCCCCcEEEecc--hhhhhcCCCCCCCEEEEECCEecCCCCHHHHHHHHHhCCCeEEEEE
Q psy2533 250 RQASTPSLPQASPYPAPAPAPADPERFYQNLS--VYRNQNGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGPIVTLEI 327 (684)
Q Consensus 250 ~~~~t~slp~~sl~~gs~~~~~d~GIFV~sI~--GaAardGrLr~GDqIL~VNG~sl~g~Th~eAv~lLk~sg~~VtL~V 327 (684)
.+...|+||..|. ++|++.|+|++||+|++|||+.+.+++++++..+|+..+..|+|.|
T Consensus 131 -------------------~~~~~g~~V~~v~~~s~A~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v~l~v 191 (200)
T 2qt5_A 131 -------------------RNKSRPVVITCVRPGGPADREGTIKPGDRLLSVDGIRLLGTTHAEAMSILKQCGQEATLLI 191 (200)
T ss_dssp -------------------TTTCEEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTTCSEEEEEE
T ss_pred -------------------ccCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEE
Confidence 0123578999987 7888888899999999999999999999999999999888999999
Q ss_pred EeCCcc
Q psy2533 328 AKQGAI 333 (684)
Q Consensus 328 ~R~~~~ 333 (684)
.|.+..
T Consensus 192 ~R~~~~ 197 (200)
T 2qt5_A 192 EYDVSV 197 (200)
T ss_dssp EEEEEC
T ss_pred EECCcc
Confidence 987543
No 5
>1p1d_A PDZ45, glutamate receptor interacting protein; PDZ domain, tandem repeats, scaffold protein, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1 b.36.1.1 PDB: 1p1e_A 1x5r_A
Probab=99.85 E-value=5.5e-20 Score=179.27 Aligned_cols=185 Identities=21% Similarity=0.193 Sum_probs=140.9
Q ss_pred CCceEEEEEecCCCcccEEEEeccCCCC-CcccEEEEEecCCChhcccCccccCCeeeecCCeecCCCCHHHHHHHHHcC
Q psy2533 89 SSMKSHSVRDMLRQEAKLSEMSEEGAGQ-DRLGIYIKSVVKGGAADANGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRT 167 (684)
Q Consensus 89 s~~~~V~v~k~~~~GLGfsI~GG~~~~~-~~~gIfIs~V~pGGpA~r~GrLqvGDrILaVNG~sl~g~sh~eAV~lLk~s 167 (684)
....+|.+.+....||||+|.+|.+... ...+++|..|.++|||+++|+|++||+|++|||.++.++++.++..+|+..
T Consensus 5 ~~~~~v~l~~~~~~glG~~i~~~~~~~~~~~~~~~V~~v~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~ 84 (196)
T 1p1d_A 5 TETTEVVLTADPVTGFGIQLQGSVFATETLSSPPLISYIEADSPAERCGVLQIGDRVMAINGIPTEDSTFEEANQLLRDS 84 (196)
T ss_dssp CEEEEEEEECBTTTBCCCEEEECSSCSSSCSCSEEEEECCTTSHHHHTSCCCSSCCEEEETTBCSTTSCHHHHHHHHHTC
T ss_pred cEEEEEEEEeCCCCccCEEEeCCcCCCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence 3456777888888999999999865432 356899999999999999999999999999999999999999999999987
Q ss_pred --CCEEEEEEEecCccccccccccCCCCCccccCCCccccccccccccccccccccc-cCCCCCCCCCCCCCCCCCCccc
Q psy2533 168 --GPIVTLEIAKQGAIYHGLATLLSQPSPVMTRGQVKTYESTISVQQRKERSSQNLH-DMNNGVGGSHHPAPGPGSGMNH 244 (684)
Q Consensus 168 --g~~V~LvV~R~~~~~~~~stl~s~psP~~~s~~~~~ses~ls~~~~~~~~sv~L~-k~s~GlGfSi~~~~g~G~Gi~i 244 (684)
+..|.|.|.|....... |... .. ...+. +...++|+.+.....
T Consensus 85 ~~g~~v~l~v~R~~~~~~~-------~~~~-----------~~---------~v~l~~~~~~~lG~~~~~~~~------- 130 (196)
T 1p1d_A 85 SITSKVTLEIEFDVAESVI-------PSSG-----------TF---------HVKLPKKHSVELGITISSPSS------- 130 (196)
T ss_dssp CSSSEEEEEEEECSCSCCB-------CCSS-----------CE---------EEEECCCSSCCCCCEEECSCS-------
T ss_pred CCCCeEEEEEEecCCCCCC-------CCCC-----------cE---------EEEecCCCCCCcCEEEECCCC-------
Confidence 78899999987642110 0000 00 00111 122334444431000
Q ss_pred ccccccccCCCCCCCCCCCCCCCCCCCCCCcEEEecc--hhhhhcCCCCCCCEEEEECCEecCCCCHHHHHHHHHhCCCe
Q psy2533 245 HPVVSRQASTPSLPQASPYPAPAPAPADPERFYQNLS--VYRNQNGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGPI 322 (684)
Q Consensus 245 kpIv~~~~~t~slp~~sl~~gs~~~~~d~GIFV~sI~--GaAardGrLr~GDqIL~VNG~sl~g~Th~eAv~lLk~sg~~ 322 (684)
.....|+||..|. ++|++.|+|++||+|++|||..+.++++.++..+|+..+..
T Consensus 131 ------------------------~~~~~gv~V~~V~~~s~A~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~~ 186 (196)
T 1p1d_A 131 ------------------------RKPGDPLVISDIKKGSVAHRTGTLELGDKLLAIDNIRLDSCSMEDAVQILQQCEDL 186 (196)
T ss_dssp ------------------------SSTTCCCEEEECCSSSHHHHTSCCCTTCEEEEETTEEGGGCCHHHHHHHHHHCTTC
T ss_pred ------------------------CCCCCCEEEEEECCCCcHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCE
Confidence 0013478999987 78888888999999999999999999999999999988889
Q ss_pred EEEEEEeCC
Q psy2533 323 VTLEIAKQG 331 (684)
Q Consensus 323 VtL~V~R~~ 331 (684)
|.|.|.|.+
T Consensus 187 v~l~v~R~~ 195 (196)
T 1p1d_A 187 VKLKIRKDE 195 (196)
T ss_dssp EEEEEECCC
T ss_pred EEEEEEeCC
Confidence 999999865
No 6
>2xkx_A Disks large homolog 4; structural protein, scaffold protein, membrane associated GU kinase; 22.9A {Rattus norvegicus}
Probab=99.78 E-value=3.6e-18 Score=197.41 Aligned_cols=207 Identities=25% Similarity=0.313 Sum_probs=139.1
Q ss_pred eEEEEEecCCCcccEEEEeccCCC--CCcccEEEEEecCCChhcccCccccCCeeeecCCeecCCCCHHHHHHHHHcCCC
Q psy2533 92 KSHSVRDMLRQEAKLSEMSEEGAG--QDRLGIYIKSVVKGGAADANGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGP 169 (684)
Q Consensus 92 ~~V~v~k~~~~GLGfsI~GG~~~~--~~~~gIfIs~V~pGGpA~r~GrLqvGDrILaVNG~sl~g~sh~eAV~lLk~sg~ 169 (684)
.+|.+.+ ...+|||+|.+|.+.. .+..|++|..|.+||||+++|+|++||+|++|||.++.+++|.+++.+|+..+.
T Consensus 156 ~~v~l~k-~~~~lG~~i~~~~~~~~~~~~~gv~V~~V~~gs~A~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~ 234 (721)
T 2xkx_A 156 MEIKLIK-GPKGLGFSIAGGVGNQHIPGDNSIYVTKIIEGGAAHKDGRLQIGDKILAVNSVGLEDVMHEDAVAALKNTYD 234 (721)
T ss_pred eeeeeee-ecCCCceeeccCCCccccCCCCceEEEEeCCCCchhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHHHcCCC
Confidence 3455544 3567999999875432 124589999999999999999999999999999999999999999999999999
Q ss_pred EEEEEEEecCccccccccccCCCCCccccCCCcc---cc-ccc--------ccc-c-c---------------ccccccc
Q psy2533 170 IVTLEIAKQGAIYHGLATLLSQPSPVMTRGQVKT---YE-STI--------SVQ-Q-R---------------KERSSQN 220 (684)
Q Consensus 170 ~V~LvV~R~~~~~~~~stl~s~psP~~~s~~~~~---se-s~l--------s~~-~-~---------------~~~~sv~ 220 (684)
.|.|+|.|......... ...|.......+... .. ..+ +.. . . .....+.
T Consensus 235 ~v~l~V~R~g~~~~~~~--~~~p~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~v~ 312 (721)
T 2xkx_A 235 VVYLKVAKPSNAYLSDS--YAPPDITTSYSQHLDNEISHSSYLGTDYPTAMTPTSPRRYSPVAKDLLGEEDIPREPRRIV 312 (721)
T ss_pred eEEEEEEeCCcccccCC--CCCCCcccCCCCCcccccCCcccccccccccCCCCCCcccCCcccccccccccccceEEEE
Confidence 99999999875421110 000000000000000 00 000 000 0 0 0000001
Q ss_pred cccCCCCCCCCCCCCCCCCCCcccccccccccCCCCCCCCCCCCCCCCCCCCCCcEEEecc--hhhhhcCCCCCCCEEEE
Q psy2533 221 LHDMNNGVGGSHHPAPGPGSGMNHHPVVSRQASTPSLPQASPYPAPAPAPADPERFYQNLS--VYRNQNGRLQAGDQLLK 298 (684)
Q Consensus 221 L~k~s~GlGfSi~~~~g~G~Gi~ikpIv~~~~~t~slp~~sl~~gs~~~~~d~GIFV~sI~--GaAardGrLr~GDqIL~ 298 (684)
+.+...++|+++. +.....|+||..|. |+|++.|+|++||+|++
T Consensus 313 l~~~~~~lG~~i~----------------------------------~~~~~~gv~V~~V~~gs~A~~aG~L~~GD~Il~ 358 (721)
T 2xkx_A 313 IHRGSTGLGFNIV----------------------------------GGEDGEGIFISFILAGGPADLSGELRKGDQILS 358 (721)
T ss_pred EEECCCCccEEEe----------------------------------ccCCCCCeEEEEeCCCChHHhcCCCccCCEEEE
Confidence 1111111111111 11124689999997 78999999999999999
Q ss_pred ECCEecCCCCHHHHHHHHHhCCCeEEEEEEeCCcccc
Q psy2533 299 VDGQSLVGITQEKAAEYLVRTGPIVTLEIAKQGAIYH 335 (684)
Q Consensus 299 VNG~sl~g~Th~eAv~lLk~sg~~VtL~V~R~~~~~~ 335 (684)
|||+++.++++++++.+|+..+..|+|.|.|....+.
T Consensus 359 VNg~~v~~~~~~e~~~~l~~~~~~v~L~v~r~~~~~~ 395 (721)
T 2xkx_A 359 VNGVDLRNASHEQAAIALKNAGQTVTIIAQYKPEEYS 395 (721)
T ss_pred ECCEECCCCCHHHHHHHHHhcCCeEEEEEEeCchhhh
Confidence 9999999999999999999999999999999876554
No 7
>3suz_A Amyloid beta A4 precursor protein-binding family 2; APP binding; 2.70A {Rattus norvegicus} PDB: 1u3b_A 1u39_A 1x45_A 1u37_A 1u38_A 2yt8_A
Probab=99.74 E-value=6e-19 Score=190.48 Aligned_cols=166 Identities=19% Similarity=0.319 Sum_probs=76.2
Q ss_pred CceEEEEEecCCCcccEEEEeccCCCCCcccEEEEEecCCChhcccCccccCCeeeecCCeecCCCCHHHHHHHHHcC--
Q psy2533 90 SMKSHSVRDMLRQEAKLSEMSEEGAGQDRLGIYIKSVVKGGAADANGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRT-- 167 (684)
Q Consensus 90 ~~~~V~v~k~~~~GLGfsI~GG~~~~~~~~gIfIs~V~pGGpA~r~GrLqvGDrILaVNG~sl~g~sh~eAV~lLk~s-- 167 (684)
..+.|.+.+..+++|||+|.++ +.+...++++|..|.+||||+++|+|++||+|++|||.++.+++|.+++.+|+..
T Consensus 204 ~~~~V~i~k~~ge~lG~~i~~~-~~g~~~~g~~V~~V~~gspA~~aG~L~~GD~Il~VnG~~v~~~~~~~~~~~l~~~~~ 282 (388)
T 3suz_A 204 NCKELQLEKHKGEILGVVVVES-GWGSILPTVILANMMNGGPAARSGKLSIGDQIMSINGTSLVGLPLATCQGIIKGLKN 282 (388)
T ss_dssp CCEEEEECCCSSCCCCCCCBCC----CCSCCCBCCCCCCSSHHHHTCCCCTTCEEEEETTEECSSCCSTTHHHHTTTCTT
T ss_pred cceEEEEECCCCCceeEEEEec-CCCCcCCCEEEEeeCCCCHHHHcCCCCCCCEEEEECCEEccCCCHHHHHHHHHhccC
Confidence 4578888888889999999974 2233345799999999999999999999999999999999999999999999986
Q ss_pred CCEEEEEEEecCccccccccccCCCCCccccCCCccccccccccccccccccccccCCCCCCCCCCCCCCCCCCcccccc
Q psy2533 168 GPIVTLEIAKQGAIYHGLATLLSQPSPVMTRGQVKTYESTISVQQRKERSSQNLHDMNNGVGGSHHPAPGPGSGMNHHPV 247 (684)
Q Consensus 168 g~~V~LvV~R~~~~~~~~stl~s~psP~~~s~~~~~ses~ls~~~~~~~~sv~L~k~s~GlGfSi~~~~g~G~Gi~ikpI 247 (684)
+..|.|+|.|.+.... +.. ...+...++|+.+.
T Consensus 283 ~~~v~l~v~r~~~~~~------------------------v~l---------~~~~~~~~lG~~i~-------------- 315 (388)
T 3suz_A 283 QTQVKLNIVSCPPVTT------------------------VLI---------KRPDLKYQLGFSVQ-------------- 315 (388)
T ss_dssp CSCEEEEEEECCSCC-----------------------------------------------------------------
T ss_pred CCccccccccccccce------------------------eeE---------eecCCCCccceEEe--------------
Confidence 4459999988643210 000 00011223444432
Q ss_pred cccccCCCCCCCCCCCCCCCCCCCCCCcEEEecc--hhhhhcCCCCCCCEEEEECCEecCCCCHHHHHHHHHhCCCeEEE
Q psy2533 248 VSRQASTPSLPQASPYPAPAPAPADPERFYQNLS--VYRNQNGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGPIVTL 325 (684)
Q Consensus 248 v~~~~~t~slp~~sl~~gs~~~~~d~GIFV~sI~--GaAardGrLr~GDqIL~VNG~sl~g~Th~eAv~lLk~sg~~VtL 325 (684)
+.||..|. |+|++.| |++||+|++|||+++.+++|++++.+|+.++..|+|
T Consensus 316 --------------------------~g~I~~V~~gs~A~~aG-L~~GD~Il~VNg~~v~~~s~~~~~~~l~~~~~~v~L 368 (388)
T 3suz_A 316 --------------------------NGIICSLMRGGIAERGG-VRVGHRIIEINGQSVVATAHEKIVQALSNSVGEIHM 368 (388)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------cCEEEEeecCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEEE
Confidence 01444444 6777777 999999999999999999999999999999999999
Q ss_pred EEEeC
Q psy2533 326 EIAKQ 330 (684)
Q Consensus 326 ~V~R~ 330 (684)
.|.+.
T Consensus 369 ~V~p~ 373 (388)
T 3suz_A 369 KTMPA 373 (388)
T ss_dssp -----
T ss_pred EEEec
Confidence 99754
No 8
>1w9e_A Syntenin 1; cell adhesion, adhesion/complex, PDZ domain, scaffolding protein signaling protein; 1.56A {Homo sapiens} SCOP: b.36.1.1 b.36.1.1 PDB: 1n99_A 1v1t_A 1obz_A 1w9o_A 1w9q_A 1ybo_A
Probab=99.66 E-value=4.2e-15 Score=141.31 Aligned_cols=158 Identities=23% Similarity=0.360 Sum_probs=119.1
Q ss_pred CceEEEEEecCCCcccEEEEeccCCCCCcccEEEEEecCCChhcccCccccCCeeeecCCeecCCCCHHHHHHHHHcC-C
Q psy2533 90 SMKSHSVRDMLRQEAKLSEMSEEGAGQDRLGIYIKSVVKGGAADANGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRT-G 168 (684)
Q Consensus 90 ~~~~V~v~k~~~~GLGfsI~GG~~~~~~~~gIfIs~V~pGGpA~r~GrLqvGDrILaVNG~sl~g~sh~eAV~lLk~s-g 168 (684)
..+.|.+.+....+|||.+.... .+++|..|.++|||+++| |++||+|++|||.++.++++..+..+++.. +
T Consensus 4 ~~r~v~l~k~~~~~lG~~~~~~~------~g~~V~~v~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~~~~~~~ 76 (166)
T 1w9e_A 4 DPREVILCKDQDGKIGLRLKSID------NGIFVQLVQANSPASLVG-LRFGDQVLQINGENCAGWSSDKAHKVLKQAFG 76 (166)
T ss_dssp CCEEEEEECCTTSCCSEEEEEET------TEEEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHHHHCCS
T ss_pred CCEEEEEEeCCCCcEeEEEEeCC------CCEEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHhcCCC
Confidence 35778888878889999998642 479999999999999999 999999999999999999997788888765 4
Q ss_pred CEEEEEEEecCccccccccccCCCCCccccCCCccccccccccccccccccccccCCCCCCCCCCCCCCCCCCccccccc
Q psy2533 169 PIVTLEIAKQGAIYHGLATLLSQPSPVMTRGQVKTYESTISVQQRKERSSQNLHDMNNGVGGSHHPAPGPGSGMNHHPVV 248 (684)
Q Consensus 169 ~~V~LvV~R~~~~~~~~stl~s~psP~~~s~~~~~ses~ls~~~~~~~~sv~L~k~s~GlGfSi~~~~g~G~Gi~ikpIv 248 (684)
..|.|+|.+...... +.... .....+|+.+.
T Consensus 77 ~~v~l~vr~~~~~~~------------------------v~l~~----------~~~~~lG~~~~--------------- 107 (166)
T 1w9e_A 77 EKITMTIRDRPFERT------------------------ITMHK----------DSTGHVGFIFK--------------- 107 (166)
T ss_dssp SEEEEEEECCTTCEE------------------------EEEEC----------CTTSCCSEEEE---------------
T ss_pred CEEEEEEEcCCCcEE------------------------EEEec----------CCCCcEeEEEe---------------
Confidence 589999944311100 00000 00112332221
Q ss_pred ccccCCCCCCCCCCCCCCCCCCCCCCcEEEecc--hhhhhcCCCCCCCEEEEECCEecCCCCHHHHHHHHHhCCCeEEEE
Q psy2533 249 SRQASTPSLPQASPYPAPAPAPADPERFYQNLS--VYRNQNGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGPIVTLE 326 (684)
Q Consensus 249 ~~~~~t~slp~~sl~~gs~~~~~d~GIFV~sI~--GaAardGrLr~GDqIL~VNG~sl~g~Th~eAv~lLk~sg~~VtL~ 326 (684)
.| +|..+. ++|++.| |++||+|++|||..+.++.+.++...++..+..++|.
T Consensus 108 ------------------------~g-~v~~v~~~s~a~~aG-l~~GD~I~~ing~~v~~~~~~~v~~~v~r~g~~~~l~ 161 (166)
T 1w9e_A 108 ------------------------NG-KITSIVKDSSAARNG-LLTEHNICEINGQNVIGLKDSQIADILSTSGTVVTIT 161 (166)
T ss_dssp ------------------------TT-EEEEECTTSHHHHTT-CCSSEEEEEETTEECTTCCHHHHHHHHHHSCSEEEEE
T ss_pred ------------------------CC-EEEEEccCCHHHHcC-CCCCCEEEEECCEECCCCChHHHHHHHhhCCCEEEEE
Confidence 12 555554 6777776 9999999999999999999999998899999988888
Q ss_pred EEe
Q psy2533 327 IAK 329 (684)
Q Consensus 327 V~R 329 (684)
|..
T Consensus 162 v~~ 164 (166)
T 1w9e_A 162 IMP 164 (166)
T ss_dssp EEE
T ss_pred EEE
Confidence 753
No 9
>3b76_A E3 ubiquitin-protein ligase LNX; PDZ, bound ligand, structural genomics, structural genomics consortium, SGC, metal-binding; 1.75A {Homo sapiens}
Probab=99.55 E-value=1.7e-14 Score=131.58 Aligned_cols=91 Identities=25% Similarity=0.365 Sum_probs=82.7
Q ss_pred CCceEEEEEecCCCcccEEEEeccCCCCCcccEEEEEecCCChhcccCccccCCeeeecCCeecCCCCHHHHHHHHHcCC
Q psy2533 89 SSMKSHSVRDMLRQEAKLSEMSEEGAGQDRLGIYIKSVVKGGAADANGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTG 168 (684)
Q Consensus 89 s~~~~V~v~k~~~~GLGfsI~GG~~~~~~~~gIfIs~V~pGGpA~r~GrLqvGDrILaVNG~sl~g~sh~eAV~lLk~sg 168 (684)
...+.|.+.+.+..+|||+|.||.+......|+||..|.++|||+++|+|++||+|++|||.++.++++.+++.+|+.++
T Consensus 23 ~~~~~v~l~k~~~~~lGf~i~gg~~~~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~ 102 (118)
T 3b76_A 23 MHEKVVNIQKDPGESLGMTVAGGASHREWDLPIYVISVEPGGVISRDGRIKTGDILLNVDGVELTEVSRSEAVALLKRTS 102 (118)
T ss_dssp EEEEEEEEECCTTCCCCEEEEECSCSTTCCCCEEEEEECTTSHHHHHCSSCTTCEEEEETTEEGGGSCHHHHHHHHHSCC
T ss_pred CCcEEEEEEeCCCCccCEEEecCCCCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 45678888877789999999998765555678999999999999999999999999999999999999999999999999
Q ss_pred CEEEEEEEecC
Q psy2533 169 PIVTLEIAKQG 179 (684)
Q Consensus 169 ~~V~LvV~R~~ 179 (684)
..|.|+|.|..
T Consensus 103 ~~v~L~v~R~~ 113 (118)
T 3b76_A 103 SSIVLKALEVK 113 (118)
T ss_dssp SEEEEEEEEEE
T ss_pred CeEEEEEEECC
Confidence 99999998864
No 10
>2db5_A INAD-like protein; PDZ domain, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ, structural genomics; NMR {Homo sapiens}
Probab=99.52 E-value=3.9e-14 Score=129.52 Aligned_cols=92 Identities=21% Similarity=0.320 Sum_probs=83.0
Q ss_pred CCceEEEEEecCCCcccEEEEeccCCCCCcccEEEEEecCCChhcccCccccCCeeeecCCeecC-CCCHHHHHHHHHcC
Q psy2533 89 SSMKSHSVRDMLRQEAKLSEMSEEGAGQDRLGIYIKSVVKGGAADANGRLQAGDQLLKVDGQSLV-GITQEKAAEYLVRT 167 (684)
Q Consensus 89 s~~~~V~v~k~~~~GLGfsI~GG~~~~~~~~gIfIs~V~pGGpA~r~GrLqvGDrILaVNG~sl~-g~sh~eAV~lLk~s 167 (684)
...+.|.+.+....+|||+|.||.+......++||..|.++|||+++|+|++||+|++|||.++. +++|.+++.+|+..
T Consensus 24 ~~~~~v~l~k~~~~~lG~~i~g~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~~l~~~ 103 (128)
T 2db5_A 24 RQIEYIDIERPSTGGLGFSVVALRSQNLGKVDIFVKDVQPGSVADRDQRLKENDQILAINHTPLDQNISHQQAIALLQQT 103 (128)
T ss_dssp CEEEEEEEECCSSSCCCCEEEEEECSSSSCEEEEEECCCTTSHHHHTCCCCSSCBEEEESSCBCSTTSCHHHHHHHHHHC
T ss_pred CceEEEEEEECCCCccCEEEecccCCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCCHHHHHHHHHcC
Confidence 34667888887778999999998876655678999999999999999999999999999999998 99999999999999
Q ss_pred CCEEEEEEEecCc
Q psy2533 168 GPIVTLEIAKQGA 180 (684)
Q Consensus 168 g~~V~LvV~R~~~ 180 (684)
+..|.|+|.|...
T Consensus 104 ~~~v~l~v~r~~~ 116 (128)
T 2db5_A 104 TGSLRLIVAREPV 116 (128)
T ss_dssp CSEEEEEEEECCC
T ss_pred CCeEEEEEEcCCC
Confidence 9999999999864
No 11
>2iwo_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP-1, HOST-virus interaction, structural genomics consortium, synaptosome, tight junction; 1.7A {Homo sapiens} PDB: 2iwp_A
Probab=99.51 E-value=3.1e-14 Score=129.79 Aligned_cols=92 Identities=17% Similarity=0.319 Sum_probs=78.0
Q ss_pred CCceEEEEEecCCCcccEEEEeccCCCCCcccEEEEEecCCChhcccCccccCCeeeecCCeecCCCCHHHHHHHHHcCC
Q psy2533 89 SSMKSHSVRDMLRQEAKLSEMSEEGAGQDRLGIYIKSVVKGGAADANGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTG 168 (684)
Q Consensus 89 s~~~~V~v~k~~~~GLGfsI~GG~~~~~~~~gIfIs~V~pGGpA~r~GrLqvGDrILaVNG~sl~g~sh~eAV~lLk~sg 168 (684)
...+.|.+.|....+|||+|.||.+......++||..|.++|||+++|.|++||+|++|||.++.+++|.+++.+|+.++
T Consensus 23 ~~~~~v~l~k~~~~~lGf~i~gg~~~~~~~~~~~V~~V~~~spA~~aggL~~GD~Il~VnG~~v~~~~~~~~~~~l~~~~ 102 (120)
T 2iwo_A 23 MGLRTVEMKKGPTDSLGISIAGGVGSPLGDVPIFIAMMHPTGVAAQTQKLRVGDRIVTICGTSTEGMTHTQAVNLLKNAS 102 (120)
T ss_dssp --CEEEEEEC----CCCEEEEEEEEETTEEEEEEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCBHHHHHHHHHHCC
T ss_pred CCcEEEEEEcCCCCCCCEEEecccCCCCCCCCEEEEEECCCCHHHHhCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 45678888888888999999998765544568999999999999999559999999999999999999999999999999
Q ss_pred CEEEEEEEecCc
Q psy2533 169 PIVTLEIAKQGA 180 (684)
Q Consensus 169 ~~V~LvV~R~~~ 180 (684)
+.|.|+|.|...
T Consensus 103 ~~v~l~v~r~g~ 114 (120)
T 2iwo_A 103 GSIEMQVVAGGD 114 (120)
T ss_dssp SEEEEEEECCTT
T ss_pred CeEEEEEEECCc
Confidence 999999998764
No 12
>1r6j_A Syntenin 1; PDZ, membrane protein; 0.73A {Homo sapiens} SCOP: b.36.1.1 PDB: 1nte_A 1obx_A 1oby_A
Probab=99.49 E-value=9.6e-14 Score=119.74 Aligned_cols=77 Identities=22% Similarity=0.378 Sum_probs=70.9
Q ss_pred CceEEEEEecCCCcccEEEEeccCCCCCcccEEEEEecCCChhcccCccccCCeeeecCCeecCCCCHHHHHHHHHcCCC
Q psy2533 90 SMKSHSVRDMLRQEAKLSEMSEEGAGQDRLGIYIKSVVKGGAADANGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGP 169 (684)
Q Consensus 90 ~~~~V~v~k~~~~GLGfsI~GG~~~~~~~~gIfIs~V~pGGpA~r~GrLqvGDrILaVNG~sl~g~sh~eAV~lLk~sg~ 169 (684)
..++|++.|...++|||++.+| +|..|.+||||+++| |++||+|++|||+++.+++|++++.+|+.++.
T Consensus 4 ~~r~v~l~k~~~g~~Gf~i~~g----------~I~~v~~gspA~~aG-l~~GD~Il~VNG~~v~~~~~~evv~llr~~g~ 72 (82)
T 1r6j_A 4 DPRTITMHKDSTGHVGFIFKNG----------KITSIVKDSSAARNG-LLTEHNICEINGQNVIGLKDSQIADILSTSGT 72 (82)
T ss_dssp CCEEEEEECCTTSCCCEEEETT----------EEEEECTTSHHHHHT-CCSSEEEEEETTEECTTCCHHHHHHHHHHSCS
T ss_pred ceEEEEEEECCCCCeEEEEECC----------EEEEecCCCHHHHcC-CCCCCEEEEECCEEcCCCCHHHHHHHHhcCCC
Confidence 4678999998889999999864 478999999999999 99999999999999999999999999999999
Q ss_pred EEEEEEEe
Q psy2533 170 IVTLEIAK 177 (684)
Q Consensus 170 ~V~LvV~R 177 (684)
.|+|+|..
T Consensus 73 ~V~L~v~p 80 (82)
T 1r6j_A 73 VVTITIMP 80 (82)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEEe
Confidence 99999864
No 13
>3axa_A Afadin, nectin-3, protein AF-6; PDZ domain, fusion protein, cell adhesion; 2.78A {Mus musculus} PDB: 1xz9_A 2exg_A* 1t2m_A 2ain_A
Probab=99.48 E-value=1.7e-13 Score=121.08 Aligned_cols=83 Identities=65% Similarity=0.966 Sum_probs=76.2
Q ss_pred cCCCcccEEEEeccCCCCCcccEEEEEecCCChhcccCccccCCeeeecCCeecCCCCHHHHHHHHHcCCCEEEEEEEec
Q psy2533 99 MLRQEAKLSEMSEEGAGQDRLGIYIKSVVKGGAADANGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGPIVTLEIAKQ 178 (684)
Q Consensus 99 ~~~~GLGfsI~GG~~~~~~~~gIfIs~V~pGGpA~r~GrLqvGDrILaVNG~sl~g~sh~eAV~lLk~sg~~V~LvV~R~ 178 (684)
+...+|||+|.+|.+......+++|..|.++|||+++|+|++||+|++|||.++.++++.+++.+++..+..|.|+|.|.
T Consensus 18 ~~~~glG~~i~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~~~~~g~~v~l~v~R~ 97 (106)
T 3axa_A 18 KKQNGMGLSIVAAKGAGQDKLGIYVKSVVKGGAADVDGRLAAGDQLLSVDGRSLVGLSQERAAELMTRTSSVVTLEVAKQ 97 (106)
T ss_dssp ECSSSCSEEEEEEECSSCSSEEEEEEEEBTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTCCSEEEEEEECC
T ss_pred CCCCccCEEEEeecCCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEeC
Confidence 57889999999987665556799999999999999999999999999999999999999999999999999999999997
Q ss_pred Ccc
Q psy2533 179 GAI 181 (684)
Q Consensus 179 ~~~ 181 (684)
...
T Consensus 98 ~~~ 100 (106)
T 3axa_A 98 GAI 100 (106)
T ss_dssp CSS
T ss_pred Ccc
Confidence 654
No 14
>1i16_A Interleukin 16, LCF; cytokine, lymphocyte chemoattractant factor, PDZ domain; NMR {Homo sapiens} SCOP: b.36.1.2
Probab=99.48 E-value=1.9e-13 Score=125.94 Aligned_cols=91 Identities=19% Similarity=0.312 Sum_probs=77.4
Q ss_pred CCceEEEEEecCCCcccEEEEeccCCCCCcccEEEEEecCCChhcccCccccCCeeeecCCeecCCCCHHHHHHHHHcCC
Q psy2533 89 SSMKSHSVRDMLRQEAKLSEMSEEGAGQDRLGIYIKSVVKGGAADANGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTG 168 (684)
Q Consensus 89 s~~~~V~v~k~~~~GLGfsI~GG~~~~~~~~gIfIs~V~pGGpA~r~GrLqvGDrILaVNG~sl~g~sh~eAV~lLk~sg 168 (684)
...+.|.+.+ ...||||+|.||.+......++||..|.+||||+++|.|++||+|++|||.++.+++|.+|+.+|+.++
T Consensus 28 ~~~~~v~l~k-~~~glG~~i~gg~~~~~~~~~i~I~~V~~gs~A~~aggL~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~ 106 (130)
T 1i16_A 28 ATVCTVTLEK-MSAGLGFSLEGGKGSLHGDKPLTINRIFKGAASEQSETVQPGDEILQLGGTAMQGLTRFEAWNIIKALP 106 (130)
T ss_dssp EEEEEEEEET-TSSSTTEEEECCCCCSSSCCCCEEEEECSSCCCSSSCCCCTTCCEEECSSCBGGGSCHHHHHHHHHTSC
T ss_pred CcEEEEEEEc-CCCccCEEEecCcCCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC
Confidence 3455666665 468999999998775444568999999999999999669999999999999999999999999999985
Q ss_pred C-EEEEEEEecCc
Q psy2533 169 P-IVTLEIAKQGA 180 (684)
Q Consensus 169 ~-~V~LvV~R~~~ 180 (684)
+ .|.|+|.|...
T Consensus 107 ~~~v~l~v~r~~~ 119 (130)
T 1i16_A 107 DGPVTIVIRRKSL 119 (130)
T ss_dssp SSEEEEEEEEESS
T ss_pred CceEEEEEEeCCC
Confidence 4 69999988753
No 15
>2ehr_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.47 E-value=2.1e-13 Score=122.63 Aligned_cols=93 Identities=19% Similarity=0.267 Sum_probs=81.9
Q ss_pred CCCceEEEEEecCCCcccEEEEeccCCC------CCcccEEEEEecCCChhcccCccccCCeeeecCCeecCCCCHHHHH
Q psy2533 88 DSSMKSHSVRDMLRQEAKLSEMSEEGAG------QDRLGIYIKSVVKGGAADANGRLQAGDQLLKVDGQSLVGITQEKAA 161 (684)
Q Consensus 88 ~s~~~~V~v~k~~~~GLGfsI~GG~~~~------~~~~gIfIs~V~pGGpA~r~GrLqvGDrILaVNG~sl~g~sh~eAV 161 (684)
....++|.+.+..+.+|||+|.||.+.. ....++||..|.++|||+++|+|++||+|++|||.++.+++|.+++
T Consensus 13 ~~~~~~v~l~k~~~~~lG~~i~gg~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~ 92 (117)
T 2ehr_A 13 WGPPRIVEIFREPNVSLGISIVGGQTVIKRLKNGEELKGIFIKQVLEDSPAGKTNALKTGDKILEVSGVDLQNASHSEAV 92 (117)
T ss_dssp BCCCEEEEECCCSSSCCCEEECCCCSCCCSSCCCSCCCSEEEEEECSSSTTTSSCSCCTTCEEEEESSCBCTTCCHHHHH
T ss_pred CCCCEEEEEEeCCCCccCEEEeCCcccccccccCCCcCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHH
Confidence 3456788888888899999999987643 1245899999999999999999999999999999999999999999
Q ss_pred HHHHcCCCEEEEEEEecCc
Q psy2533 162 EYLVRTGPIVTLEIAKQGA 180 (684)
Q Consensus 162 ~lLk~sg~~V~LvV~R~~~ 180 (684)
.+|+..+..|.|+|.|...
T Consensus 93 ~~~~~~g~~v~l~v~r~~~ 111 (117)
T 2ehr_A 93 EAIKNAGNPVVFIVQSLSS 111 (117)
T ss_dssp HHHHTSCSSEEEEECCBSC
T ss_pred HHHHcCCCeEEEEEEECCC
Confidence 9999999999999988654
No 16
>3gge_A PDZ domain-containing protein GIPC2; structural genomics, structural genomics consort protein binding; 2.60A {Homo sapiens}
Probab=99.47 E-value=1.9e-13 Score=121.21 Aligned_cols=85 Identities=20% Similarity=0.300 Sum_probs=73.6
Q ss_pred CceEEEEEecCCCcccEEEEeccCCCCCcccEEEEEecCCChhcccCccccCCeeeecCCeecCCCCHHHHHHHHHcC--
Q psy2533 90 SMKSHSVRDMLRQEAKLSEMSEEGAGQDRLGIYIKSVVKGGAADANGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRT-- 167 (684)
Q Consensus 90 ~~~~V~v~k~~~~GLGfsI~GG~~~~~~~~gIfIs~V~pGGpA~r~GrLqvGDrILaVNG~sl~g~sh~eAV~lLk~s-- 167 (684)
..+.|.+.|. ..+|||+|.++ + ...+||++|.+||+|+++|+|++||+|++|||+++.+++|.+++.+|+++
T Consensus 5 ~~k~V~l~K~-~~~LG~tI~~~-g----~g~~~I~rI~~gg~a~r~g~L~vGD~I~~VNG~~v~g~~h~evv~lLk~~~~ 78 (95)
T 3gge_A 5 IEKEVNVYKS-EDSLGLTITDN-G----VGYAFIKRIKDGGVIDSVKTICVGDHIESINGENIVGWRHYDVAKKLKELKK 78 (95)
T ss_dssp EEEEEEEECC-SSCCCEEEECS-S----SSCCEEEEECTTSHHHHCTTCCTTCEEEEETTEECTTCCHHHHHHHHHHSCT
T ss_pred eEEEEEEEEC-CCCceEEEEcC-C----CCcEEEEEEcCCChHHhcCCCCCCCEEEEECCEEccCCCHHHHHHHHHhCCC
Confidence 4578888875 48999999964 2 23589999999999999999999999999999999999999999999986
Q ss_pred CCEEEEEEEecCc
Q psy2533 168 GPIVTLEIAKQGA 180 (684)
Q Consensus 168 g~~V~LvV~R~~~ 180 (684)
+..++|.+.+...
T Consensus 79 g~~~~L~lv~p~~ 91 (95)
T 3gge_A 79 EELFTMKLIEPKK 91 (95)
T ss_dssp TCEEEEEEEEECS
T ss_pred CCEEEEEEECccc
Confidence 5588998887654
No 17
>2byg_A Channel associated protein of synapse-110; DLG2, PDZ, PDZ domain, structural genomics, structural genom consortium, SGC, phosphorylation; 1.85A {Homo sapiens} SCOP: b.36.1.1
Probab=99.46 E-value=2.5e-13 Score=123.10 Aligned_cols=90 Identities=30% Similarity=0.429 Sum_probs=78.5
Q ss_pred CceEEEEEecCCCcccEEEEeccCCCC--CcccEEEEEecCCChhcccCccccCCeeeecCCeecCCCCHHHHHHHHHcC
Q psy2533 90 SMKSHSVRDMLRQEAKLSEMSEEGAGQ--DRLGIYIKSVVKGGAADANGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRT 167 (684)
Q Consensus 90 ~~~~V~v~k~~~~GLGfsI~GG~~~~~--~~~gIfIs~V~pGGpA~r~GrLqvGDrILaVNG~sl~g~sh~eAV~lLk~s 167 (684)
..+.|.+.+.. .||||+|.||.+... ...+++|..|.++|||+++|+|++||+|++|||.++.++++.+++.+|+..
T Consensus 24 ~~~~v~l~k~~-~glG~~i~gg~~~~~~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~ 102 (117)
T 2byg_A 24 TVVEIKLFKGP-KGLGFSIAGGVGNQHIPGDNSIYVTKIIDGGAAQKDGRLQVGDRLLMVNNYSLEEVTHEEAVAILKNT 102 (117)
T ss_dssp EEEEEEEECBT-TBSSEEEEECTTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTC
T ss_pred ceEEEEEEeCC-CCcCEEEEcccCCCCccCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 45666776654 899999999876432 346899999999999999999999999999999999999999999999999
Q ss_pred CCEEEEEEEecCc
Q psy2533 168 GPIVTLEIAKQGA 180 (684)
Q Consensus 168 g~~V~LvV~R~~~ 180 (684)
+..|.|+|.|...
T Consensus 103 g~~v~l~v~R~~~ 115 (117)
T 2byg_A 103 SEVVYLKVGKPTT 115 (117)
T ss_dssp CSEEEEEEEEEEE
T ss_pred CCeEEEEEEeCCc
Confidence 9999999998753
No 18
>2d92_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.46 E-value=3.9e-13 Score=119.61 Aligned_cols=91 Identities=24% Similarity=0.267 Sum_probs=78.5
Q ss_pred CCCceEEEEEecCCCcccEEEEeccCCCC-CcccEEEEEecCCChhcccCccccCCeeeecCCeecCCCCHHHHHHHHHc
Q psy2533 88 DSSMKSHSVRDMLRQEAKLSEMSEEGAGQ-DRLGIYIKSVVKGGAADANGRLQAGDQLLKVDGQSLVGITQEKAAEYLVR 166 (684)
Q Consensus 88 ~s~~~~V~v~k~~~~GLGfsI~GG~~~~~-~~~gIfIs~V~pGGpA~r~GrLqvGDrILaVNG~sl~g~sh~eAV~lLk~ 166 (684)
....+.|.+.|.. .+|||+|.+|.+... ...++||..|.++|||+++|+|++||+|++|||.++.+++|.+++.+|+.
T Consensus 13 ~~~~~~v~l~k~~-~glG~~i~~~~~~~~~~~~g~~V~~v~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~ 91 (108)
T 2d92_A 13 SPEVKIVELVKDC-KGLGFSILDYQDPLDPTRSVIVIRSLVADGVAERSGGLLPGDRLVSVNEYCLDNTSLAEAVEILKA 91 (108)
T ss_dssp CSSCEEEEEEECS-SCCSEEEEEEECSSCTTCEEEEEEEECTTCHHHHHTCCCTTCEEEEESSCBCTTCCHHHHHHHHHH
T ss_pred CCceEEEEEEECC-CccCEEEecccccCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHh
Confidence 3456788887764 799999999866321 35689999999999999999999999999999999999999999999998
Q ss_pred C-CCEEEEEEEecC
Q psy2533 167 T-GPIVTLEIAKQG 179 (684)
Q Consensus 167 s-g~~V~LvV~R~~ 179 (684)
. +..|.|+|.|..
T Consensus 92 ~~~~~v~l~v~R~~ 105 (108)
T 2d92_A 92 VPPGLVHLGICSGP 105 (108)
T ss_dssp SCSEEEEEEEECCC
T ss_pred CCCCeEEEEEEcCC
Confidence 6 568999998864
No 19
>1wfg_A Regulating synaptic membrane exocytosis protein 2; PDZ domain, RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2css_A 1zub_A
Probab=99.46 E-value=6.5e-14 Score=129.45 Aligned_cols=81 Identities=28% Similarity=0.434 Sum_probs=74.3
Q ss_pred CCCcccEEEEeccCCCCCcccEEEEEecCCChhcccCccccCCeeeecCCeecCCCCHHHHHHHHHcCC--CEEEEEEEe
Q psy2533 100 LRQEAKLSEMSEEGAGQDRLGIYIKSVVKGGAADANGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTG--PIVTLEIAK 177 (684)
Q Consensus 100 ~~~GLGfsI~GG~~~~~~~~gIfIs~V~pGGpA~r~GrLqvGDrILaVNG~sl~g~sh~eAV~lLk~sg--~~V~LvV~R 177 (684)
...+|||+|.||.+...+..++||..|.++|||+++|+|++||+|++|||.++.+++|.+++.+|+.+. ..|.|+|.|
T Consensus 46 ~~~~lG~~i~gg~~~~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R 125 (131)
T 1wfg_A 46 SGAMLGLKVVGGKMTESGRLCAFITKVKKGSLADTVGHLRPGDEVLEWNGRLLQGATFEEVYNIILESKPEPQVELVVSR 125 (131)
T ss_dssp SCTTTTEEEEEEEECSSSCEEEEEEEECTTSHHHHTSCCCTTCEEEEETTEECTTCCHHHHHHHHHHTSSSSEEEEEEEE
T ss_pred CCCCCCEEEecCccCCCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhcCCCCEEEEEEEc
Confidence 678999999998876656679999999999999999999999999999999999999999999999874 889999999
Q ss_pred cCc
Q psy2533 178 QGA 180 (684)
Q Consensus 178 ~~~ 180 (684)
..+
T Consensus 126 ~g~ 128 (131)
T 1wfg_A 126 SGP 128 (131)
T ss_dssp ECS
T ss_pred CCC
Confidence 764
No 20
>2qg1_A Multiple PDZ domain protein; MPDZ, MUPP1, structural genomics, structural genomics consortium, SGC, signaling protein; 1.40A {Homo sapiens}
Probab=99.46 E-value=2.5e-13 Score=116.71 Aligned_cols=87 Identities=33% Similarity=0.487 Sum_probs=77.9
Q ss_pred CCceEEEEEecCCCcccEEEEeccCCCCCcccEEEEEecCCChhcccCccccCCeeeecCCeecCCCCHHHHHHHHHcCC
Q psy2533 89 SSMKSHSVRDMLRQEAKLSEMSEEGAGQDRLGIYIKSVVKGGAADANGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTG 168 (684)
Q Consensus 89 s~~~~V~v~k~~~~GLGfsI~GG~~~~~~~~gIfIs~V~pGGpA~r~GrLqvGDrILaVNG~sl~g~sh~eAV~lLk~sg 168 (684)
+...+|.+.+.+..+|||++.++.+ ..+++|..|.++|||+++|+|++||+|++|||.++.++++.+++.+++..+
T Consensus 3 ~~~~~v~l~k~~~~~lG~~~~~~~~----~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~~ 78 (92)
T 2qg1_A 3 SDTLTIGLQKKPGKGLGLSIVGKRN----DTGVFVSDIVKGGIADADGRLMQGDQILMVNGEDVRNATQEAVAALLKCSL 78 (92)
T ss_dssp -CEEEEEEECCTTSCCSEEEECCSS----SCSCEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCCHHHHHHHHHHCC
T ss_pred ceEEEEEEEeCCCCcccEEEEeccC----CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 3456788888888999999998654 248999999999999999999999999999999999999999999999999
Q ss_pred CEEEEEEEecC
Q psy2533 169 PIVTLEIAKQG 179 (684)
Q Consensus 169 ~~V~LvV~R~~ 179 (684)
..|.|+|.|..
T Consensus 79 ~~v~l~v~R~~ 89 (92)
T 2qg1_A 79 GTVTLEVGRIS 89 (92)
T ss_dssp SEEEEEEECCC
T ss_pred CeEEEEEEccc
Confidence 99999998875
No 21
>3l4f_D SH3 and multiple ankyrin repeat domains protein 1; coiled-coil, PDZ, guanine-nucleotide releasing factor, phosphoprotein, SH3 domain; 2.80A {Rattus norvegicus}
Probab=99.46 E-value=4.9e-13 Score=123.85 Aligned_cols=93 Identities=18% Similarity=0.222 Sum_probs=81.3
Q ss_pred CCCCceEEEEEecCCCcccEEEEeccCCC---------CCcccEEEEEecCCChhcccCccccCCeeeecCCeecCCCCH
Q psy2533 87 LDSSMKSHSVRDMLRQEAKLSEMSEEGAG---------QDRLGIYIKSVVKGGAADANGRLQAGDQLLKVDGQSLVGITQ 157 (684)
Q Consensus 87 ~~s~~~~V~v~k~~~~GLGfsI~GG~~~~---------~~~~gIfIs~V~pGGpA~r~GrLqvGDrILaVNG~sl~g~sh 157 (684)
.....++|++.|....+|||+|.++.+.. ....|++|..|.+||||+++| |++||+|++|||.++.++++
T Consensus 24 ~~~~~r~v~l~r~~~~g~Gf~i~g~~~~~~~~~~~~~~~~~~gv~V~~V~~gspA~~aG-L~~GD~Il~Vng~~v~~~~~ 102 (132)
T 3l4f_D 24 YIIKEKTVLLQKKDSEGFGFVLRGAKAQTPIEEFTPTPAFPALQYLESVDEGGVAWRAG-LRMGDFLIEVNGQNVVKVGH 102 (132)
T ss_dssp CCCCCCEEEEECCTTSCCCEEEEEECCSSCCSCCCCCTTSCCSEEEEEECTTSGGGGGT-CCTTCEEEEESSSBCTTSCH
T ss_pred cCCCCEEEEEEECCCCcEeEEEeccCCCCccccccccccCCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCH
Confidence 34567789999988899999999987632 122379999999999999999 99999999999999999999
Q ss_pred HHHHHHHHcCCCEEEEEEEecCc
Q psy2533 158 EKAAEYLVRTGPIVTLEIAKQGA 180 (684)
Q Consensus 158 ~eAV~lLk~sg~~V~LvV~R~~~ 180 (684)
.+++.+|+..+..|.|+|.+...
T Consensus 103 ~~~~~~l~~~g~~v~l~v~~~~~ 125 (132)
T 3l4f_D 103 RQVVNMIRQGGNTLMVKVVMVTR 125 (132)
T ss_dssp HHHHHHHHHTTTEEEEEEECCCC
T ss_pred HHHHHHHHcCCCEEEEEEEECCC
Confidence 99999999999999999987653
No 22
>3cbz_A Dishevelled-2; PDZ domain, phage derived high affinity ligand, cytoplasm, developmental protein, phosphoprotein, WNT signaling pathway; 1.38A {Homo sapiens} PDB: 3cby_A 3cc0_A 3cbx_A 2rey_A 2f0a_A 1l6o_A 3fy5_A 2kaw_A* 1mc7_A
Probab=99.46 E-value=8.8e-14 Score=124.10 Aligned_cols=90 Identities=27% Similarity=0.427 Sum_probs=78.3
Q ss_pred CceEEEEEecCCCcccEEEEeccCCCCCcccEEEEEecCCChhcccCccccCCeeeecCCeecCCCCHHHHHHHHHcC--
Q psy2533 90 SMKSHSVRDMLRQEAKLSEMSEEGAGQDRLGIYIKSVVKGGAADANGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRT-- 167 (684)
Q Consensus 90 ~~~~V~v~k~~~~GLGfsI~GG~~~~~~~~gIfIs~V~pGGpA~r~GrLqvGDrILaVNG~sl~g~sh~eAV~lLk~s-- 167 (684)
...+|.+.+....+|||+|.||.+. ....++||..|.++|||+++|+|++||+|++|||+++.+++|.+++.+|+.+
T Consensus 5 ~~~~v~l~k~~~~~lG~~i~g~~~~-~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~ 83 (108)
T 3cbz_A 5 NIITVTLNMEKYNFLGISIVGQSNE-RGDGGIYIGSIMKGGAVAADGRIEPGDMLLQVNDMNFENMSNDDAVRVLRDIVH 83 (108)
T ss_dssp CEEEEEECHHHHCCCCEEEEEECSS-TTCCEEEEEEECTTSHHHHHCCCCTTCEEEEETTEETTSCCHHHHHHHHHHHHT
T ss_pred eEEEEEEEeCCCCccCEEEEcCcCC-CCCCCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccc
Confidence 4567777777789999999998653 2356899999999999999999999999999999999999999999999976
Q ss_pred -CCEEEEEEEecCc
Q psy2533 168 -GPIVTLEIAKQGA 180 (684)
Q Consensus 168 -g~~V~LvV~R~~~ 180 (684)
+..|.|+|.|...
T Consensus 84 ~~~~v~l~v~R~~~ 97 (108)
T 3cbz_A 84 KPGPIVLTVAKSGG 97 (108)
T ss_dssp SSSCEEEEEECCCC
T ss_pred CCCeEEEEEEeCCC
Confidence 4579999988653
No 23
>1ujd_A KIAA0559 protein; PDZ domain, structural genomics, human cDNA, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.46 E-value=2.1e-13 Score=123.18 Aligned_cols=92 Identities=16% Similarity=0.252 Sum_probs=79.7
Q ss_pred CceEEEEEecC------CCcccEEEEeccCCCC--CcccEEEEEecCCChhcccCccccCCeeeecCCeecCCCCHHHHH
Q psy2533 90 SMKSHSVRDML------RQEAKLSEMSEEGAGQ--DRLGIYIKSVVKGGAADANGRLQAGDQLLKVDGQSLVGITQEKAA 161 (684)
Q Consensus 90 ~~~~V~v~k~~------~~GLGfsI~GG~~~~~--~~~gIfIs~V~pGGpA~r~GrLqvGDrILaVNG~sl~g~sh~eAV 161 (684)
..+.+.+.+.. ..+|||+|.||.+.+. ...++||..|.++|||+++|+|++||+|++|||.++.+++|.+++
T Consensus 12 ~~~~v~l~r~~~~~~~~~~glG~~i~g~~~~~~~~~~~g~~V~~v~~~s~A~~aG~L~~GD~Il~vng~~v~~~~~~~~~ 91 (117)
T 1ujd_A 12 PHARIKITRDSKDHTVSGNGLGIRIVGGKEIPGHSGEIGAYIAKILPGGSAEQTGKLMEGMQVLEWNGIPLTSKTYEEVQ 91 (117)
T ss_dssp CEEEEEECCCSSSSCSSCCSCSEEEEEEEECSSSSSCEEEEEEEECTTCHHHHHSSCCTTCEEEEETTEECTTCCHHHHH
T ss_pred ceEEEEEEecCcccCCCCCcccEEEeCCCCCCcccCCcCEEEEEECCCCHHHHcCCCCCCCEEEEECCEEcCCCCHHHHH
Confidence 44566676665 5799999999876432 345899999999999999999999999999999999999999999
Q ss_pred HHHHcCCCEEEEEEEecCcc
Q psy2533 162 EYLVRTGPIVTLEIAKQGAI 181 (684)
Q Consensus 162 ~lLk~sg~~V~LvV~R~~~~ 181 (684)
.+|+..+..|.|+|.|....
T Consensus 92 ~~l~~~~~~v~l~v~R~~~~ 111 (117)
T 1ujd_A 92 SIISQQSGEAEICVRLDLNM 111 (117)
T ss_dssp HHHSCCSSCEEEEEESSCCC
T ss_pred HHHhcCCCEEEEEEEECCcc
Confidence 99999999999999987653
No 24
>1wi4_A Synip, syntaxin binding protein 4; syntaxin4-interacting protein, STXBP4 protein, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.46 E-value=3.3e-13 Score=120.84 Aligned_cols=87 Identities=23% Similarity=0.440 Sum_probs=74.6
Q ss_pred CceEEEEEecCCCcccEEEEeccCCCCCcccEEEEEecCCChhcccCccccCCeeeecCCeecCCCCHHHHHHHHHcCC-
Q psy2533 90 SMKSHSVRDMLRQEAKLSEMSEEGAGQDRLGIYIKSVVKGGAADANGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTG- 168 (684)
Q Consensus 90 ~~~~V~v~k~~~~GLGfsI~GG~~~~~~~~gIfIs~V~pGGpA~r~GrLqvGDrILaVNG~sl~g~sh~eAV~lLk~sg- 168 (684)
..+.+.+.+ +.||||+|.||.+... ..++||..|.++|||+++|+|++||+|++|||+++.+++|.+++.+|+.+.
T Consensus 15 ~~~~v~l~k--~~glG~~i~gg~~~~~-~~~~~V~~v~~~s~A~~aG~l~~GD~Il~Vng~~~~~~~~~~~~~~l~~~~~ 91 (109)
T 1wi4_A 15 AFRVITVTK--ETGLGLKILGGINRNE-GPLVYIHEVIPGGDCYKDGRLKPGDQLVSINKESMIGVSFEEAKSIITRAKL 91 (109)
T ss_dssp TEEEEEECC--SSCCCEEEEECSSSSS-CSSEEEEEECTTSHHHHHCSCCTTCBEEEETTSCCTTCCHHHHHHHHHHSCC
T ss_pred cEEEEEEeC--CCccCEEEEeccCCCC-CCCEEEEEeCCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcccc
Confidence 456666655 3899999999876542 347999999999999999999999999999999999999999999999765
Q ss_pred ---CEEEEEEEecC
Q psy2533 169 ---PIVTLEIAKQG 179 (684)
Q Consensus 169 ---~~V~LvV~R~~ 179 (684)
..+.|.|.|..
T Consensus 92 r~~~~~~l~v~R~~ 105 (109)
T 1wi4_A 92 RSESPWEIAFIRSG 105 (109)
T ss_dssp SSSSCEEEEEECCC
T ss_pred CCCceEEEEEEeCC
Confidence 67889888865
No 25
>4amh_A Disks large homolog 1; permutation, protein folding, structural protein; 2.30A {Homo sapiens}
Probab=99.45 E-value=2.2e-13 Score=121.09 Aligned_cols=84 Identities=32% Similarity=0.466 Sum_probs=74.1
Q ss_pred EecCCCcccEEEEeccCCCC--CcccEEEEEecCCChhcccCccccCCeeeecCCeecCCCCHHHHHHHHHcCCCEEEEE
Q psy2533 97 RDMLRQEAKLSEMSEEGAGQ--DRLGIYIKSVVKGGAADANGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGPIVTLE 174 (684)
Q Consensus 97 ~k~~~~GLGfsI~GG~~~~~--~~~gIfIs~V~pGGpA~r~GrLqvGDrILaVNG~sl~g~sh~eAV~lLk~sg~~V~Lv 174 (684)
....+.+|||+|+||.+... ...+++|..|.++|||+++|+|++||+|++|||.++.+++|.+++.+++..+..|.|+
T Consensus 8 ~~~~~~~~Gf~i~gG~~~~~~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~v~l~ 87 (106)
T 4amh_A 8 VPRGSKGLGFSIAGGVGNQHWPGDNSIYVTKIIEGGAAHKDGKLQIGDKLLAVNNVALEEVTHEEAVTALKNTSDFVYLK 87 (106)
T ss_dssp ----CCCSCEEEEECTTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHHSCCSEEEEE
T ss_pred CCCCCCccCEEEEeccCCccccCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHhCCCCeEEEE
Confidence 34578899999999987653 4558999999999999999999999999999999999999999999999999999999
Q ss_pred EEecCc
Q psy2533 175 IAKQGA 180 (684)
Q Consensus 175 V~R~~~ 180 (684)
|.|...
T Consensus 88 v~R~~~ 93 (106)
T 4amh_A 88 VAKPGS 93 (106)
T ss_dssp EECCSS
T ss_pred EEeCCC
Confidence 999764
No 26
>2o2t_A Multiple PDZ domain protein; structural protein, structural genomics, structural genomics consortium, SGC; 2.70A {Homo sapiens}
Probab=99.45 E-value=1.2e-13 Score=123.99 Aligned_cols=92 Identities=25% Similarity=0.398 Sum_probs=82.1
Q ss_pred CCceEEEEEecCCCcccEEEEeccCCCCCcccEEEEEecCCChhcccCccccCCeeeecCCeecC-CCCHHHHHHHHHcC
Q psy2533 89 SSMKSHSVRDMLRQEAKLSEMSEEGAGQDRLGIYIKSVVKGGAADANGRLQAGDQLLKVDGQSLV-GITQEKAAEYLVRT 167 (684)
Q Consensus 89 s~~~~V~v~k~~~~GLGfsI~GG~~~~~~~~gIfIs~V~pGGpA~r~GrLqvGDrILaVNG~sl~-g~sh~eAV~lLk~s 167 (684)
...+.|.+.+..+.+|||+|.++.+......|++|..|.++|||+++|+|++||+|++|||.++. ++++.+++.+|+..
T Consensus 19 ~~~~~v~l~k~~~~~lG~~i~~~~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~Il~ing~~v~~~~~~~~~~~~l~~~ 98 (117)
T 2o2t_A 19 RHVEVFELLKPPSGGLGFSVVGLRSENRGELGIFVQEIQEGSVAHRDGRLKETDQILAINGQALDQTITHQQAISILQKA 98 (117)
T ss_dssp SCEEEEEEECCSSSCSSCCEEEEECCC--CEEEEECCCCTTSHHHHHCCCCTTCEEEEETTEECCTTSCHHHHHHHHHHC
T ss_pred CeEEEEEEEECCCCCCCEEEeecccCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCCHHHHHHHHHcC
Confidence 45678888888889999999998765545578999999999999999999999999999999998 99999999999999
Q ss_pred CCEEEEEEEecCc
Q psy2533 168 GPIVTLEIAKQGA 180 (684)
Q Consensus 168 g~~V~LvV~R~~~ 180 (684)
+..|.|+|.|...
T Consensus 99 ~~~v~l~v~R~~~ 111 (117)
T 2o2t_A 99 KDTVQLVIARGSL 111 (117)
T ss_dssp CSEEEEEEESSCC
T ss_pred CCEEEEEEEeCCc
Confidence 9999999998764
No 27
>2fne_A Multiple PDZ domain protein; structural protein, structural genomics, SGC, structural genomics consortium, unknown function; 1.83A {Homo sapiens} SCOP: b.36.1.1
Probab=99.45 E-value=1.3e-13 Score=125.00 Aligned_cols=90 Identities=37% Similarity=0.498 Sum_probs=78.9
Q ss_pred CceEEEEEecCCCcccEEEEeccCCCCCcccEEEEEecCCChhcccCccccCCeeeecCCeecCCCCHHHHHHHHHcCCC
Q psy2533 90 SMKSHSVRDMLRQEAKLSEMSEEGAGQDRLGIYIKSVVKGGAADANGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGP 169 (684)
Q Consensus 90 ~~~~V~v~k~~~~GLGfsI~GG~~~~~~~~gIfIs~V~pGGpA~r~GrLqvGDrILaVNG~sl~g~sh~eAV~lLk~sg~ 169 (684)
..+.|.+.|.. .||||+|.+|.+...+..|++|..|.++|||+++|+|++||+|++|||.++.++++.+++.+|+..++
T Consensus 25 ~~~~v~L~k~~-~glGf~l~~g~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~ 103 (117)
T 2fne_A 25 QCKSITLERGP-DGLGFSIVGGYGSPHGDLPIYVKTVFAKGAASEDGRLKRGDQIIAVNGQSLEGVTHEEAVAILKRTKG 103 (117)
T ss_dssp EEEEEEECCBT-TBTSEEEEEEEEETTEEEEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHCCS
T ss_pred ccEEEEEEeCC-CcccEEEecccCCCCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCC
Confidence 34567776654 79999999987654445689999999999999999999999999999999999999999999999888
Q ss_pred EEEEEEEecCc
Q psy2533 170 IVTLEIAKQGA 180 (684)
Q Consensus 170 ~V~LvV~R~~~ 180 (684)
.|.|+|.|...
T Consensus 104 ~v~l~v~R~g~ 114 (117)
T 2fne_A 104 TVTLMVLSSDE 114 (117)
T ss_dssp SEEEEEEECSC
T ss_pred eEEEEEEeCCc
Confidence 89999998763
No 28
>2dc2_A GOPC, golgi associated PDZ and coiled-coil motif containing isoform B; GOPC PDZ domain, structural protein; NMR {Homo sapiens}
Probab=99.45 E-value=2.7e-13 Score=119.87 Aligned_cols=90 Identities=20% Similarity=0.273 Sum_probs=78.5
Q ss_pred CCceEEEEEecCCCcccEEEEeccCCCCCcccEEEEEecCCChhcccCccccCCeeeecCCeecCCCCHHHHHHHHHcCC
Q psy2533 89 SSMKSHSVRDMLRQEAKLSEMSEEGAGQDRLGIYIKSVVKGGAADANGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTG 168 (684)
Q Consensus 89 s~~~~V~v~k~~~~GLGfsI~GG~~~~~~~~gIfIs~V~pGGpA~r~GrLqvGDrILaVNG~sl~g~sh~eAV~lLk~sg 168 (684)
...+.|.+.+..+.+|||+|.+|.+.. .+++|..|.++|||+++|.|++||+|++|||.++.++++.+++.+|+.++
T Consensus 8 ~~~~~v~l~~~~~~~lG~~l~~g~~~~---~~~~V~~V~~~s~A~~a~gL~~GD~Il~Ing~~v~~~~~~~~~~~l~~~~ 84 (103)
T 2dc2_A 8 GPIRKVLLLKEDHEGLGISITGGKEHG---VPILISEIHPGQPADRCGGLHVGDAILAVNGVNLRDTKHKEAVTILSQQR 84 (103)
T ss_dssp -CEEEEEEECCSSSCCCEEEEEEGGGT---EEEEEEEECTTSHHHHHTCCCSSEEEEEETTEESTTSCHHHHHHHHHHCC
T ss_pred CCcEEEEEEeCCCCccCEEEEeccCCC---CCEEEEEECCCCHHHHhCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC
Confidence 345778888888899999999986543 47999999999999997339999999999999999999999999999999
Q ss_pred CEEEEEEEecCcc
Q psy2533 169 PIVTLEIAKQGAI 181 (684)
Q Consensus 169 ~~V~LvV~R~~~~ 181 (684)
+.|.|+|.+....
T Consensus 85 ~~v~l~v~~~~~~ 97 (103)
T 2dc2_A 85 GEIEFEVVYVALE 97 (103)
T ss_dssp SEEEEEEEECC--
T ss_pred CcEEEEEEecCCc
Confidence 9999999987653
No 29
>2awx_A Synapse associated protein 97; membrane protein, synaptic signaling, trafficking protein; HET: HIS; 1.80A {Rattus norvegicus} PDB: 2g2l_A 2awu_A 2aww_A 3rl8_A
Probab=99.45 E-value=4.2e-13 Score=118.50 Aligned_cols=90 Identities=30% Similarity=0.429 Sum_probs=78.0
Q ss_pred ceEEEEEecCCCcccEEEEeccCCCC--CcccEEEEEecCCChhcccCccccCCeeeecCCeecCCCCHHHHHHHHHcCC
Q psy2533 91 MKSHSVRDMLRQEAKLSEMSEEGAGQ--DRLGIYIKSVVKGGAADANGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTG 168 (684)
Q Consensus 91 ~~~V~v~k~~~~GLGfsI~GG~~~~~--~~~gIfIs~V~pGGpA~r~GrLqvGDrILaVNG~sl~g~sh~eAV~lLk~sg 168 (684)
..+|.+.+.. .+|||+|.||.+... ...+++|..|.++|||+++|+|++||+|++|||.++.++++.+++.+++..+
T Consensus 4 ~~~v~l~k~~-~glG~~i~gg~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~~ 82 (105)
T 2awx_A 4 IMEIKLIKGP-KGLGFSIAGGVGNQHIPGDNSIYVTKIIEGGAAHKDGKLQIGDKLLAVNSVSLEEVTHEEAVTALKNTS 82 (105)
T ss_dssp EEEEEEECBT-TBSSEEEEECBTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCBHHHHHHHHHSCC
T ss_pred EEEEEEEECC-CCCCEEEeCccCCCCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 4566676654 799999999876432 3458999999999999999999999999999999999999999999999999
Q ss_pred CEEEEEEEecCcc
Q psy2533 169 PIVTLEIAKQGAI 181 (684)
Q Consensus 169 ~~V~LvV~R~~~~ 181 (684)
..|.|+|.|....
T Consensus 83 ~~v~l~v~R~~~~ 95 (105)
T 2awx_A 83 DFVYLKVAKPTSM 95 (105)
T ss_dssp SEEEEEEECCCC-
T ss_pred CeEEEEEEcCCCC
Confidence 9999999997654
No 30
>1d5g_A Human phosphatase HPTP1E; protein-peptide complex, hydrolase; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 3lnx_A 3lny_A 3pdz_A 1vj6_A 1gm1_A 1ozi_A
Probab=99.45 E-value=5.1e-13 Score=115.61 Aligned_cols=89 Identities=31% Similarity=0.474 Sum_probs=78.6
Q ss_pred CceEEEEEecCCCcccEEEEeccCCCCCcccEEEEEecCCChhcccCccccCCeeeecCCeecCCCCHHHHHHHHHcCCC
Q psy2533 90 SMKSHSVRDMLRQEAKLSEMSEEGAGQDRLGIYIKSVVKGGAADANGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGP 169 (684)
Q Consensus 90 ~~~~V~v~k~~~~GLGfsI~GG~~~~~~~~gIfIs~V~pGGpA~r~GrLqvGDrILaVNG~sl~g~sh~eAV~lLk~sg~ 169 (684)
...+|.+.+ ...+|||+|.+|.+......+++|..|.++|||+++|+|++||+|++|||.++.++++.+++.+++..+.
T Consensus 5 ~~~~v~l~k-~~~~lG~~i~~g~~~~~~~~g~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~g~ 83 (96)
T 1d5g_A 5 DIFEVELAK-NDNSLGISVTGGVNTSVRHGGIYVKAVIPQGAAESDGRIHKGDRVLAVNGVSLEGATHKQAVETLRNTGQ 83 (96)
T ss_dssp CEEEEEEEC-SSSSCCEEEECCSSSCSSSSCCEEEEECTTSHHHHTTCCCTTCEEEEETTEECTTCCHHHHHHHHHSCCS
T ss_pred CEEEEEEEe-CCCCCCEEEECCCCCCCCcCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCC
Confidence 455666665 4689999999987765555689999999999999999999999999999999999999999999999889
Q ss_pred EEEEEEEecC
Q psy2533 170 IVTLEIAKQG 179 (684)
Q Consensus 170 ~V~LvV~R~~ 179 (684)
.|.|+|.|..
T Consensus 84 ~v~l~v~R~~ 93 (96)
T 1d5g_A 84 VVHLLLEKGQ 93 (96)
T ss_dssp EEEEEEECCS
T ss_pred eEEEEEEcCC
Confidence 9999998865
No 31
>1qav_A Alpha-1 syntrophin (residues 77-171); beta-finger, heterodimer, membrane protein-oxidoreductase CO; 1.90A {Mus musculus} SCOP: b.36.1.1 PDB: 1z86_A 2pdz_A 2vrf_A
Probab=99.44 E-value=4e-13 Score=115.12 Aligned_cols=87 Identities=29% Similarity=0.347 Sum_probs=78.1
Q ss_pred CCceEEEEEecCCCcccEEEEeccCCCCCcccEEEEEecCCChhcccCccccCCeeeecCCeecCCCCHHHHHHHHHcCC
Q psy2533 89 SSMKSHSVRDMLRQEAKLSEMSEEGAGQDRLGIYIKSVVKGGAADANGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTG 168 (684)
Q Consensus 89 s~~~~V~v~k~~~~GLGfsI~GG~~~~~~~~gIfIs~V~pGGpA~r~GrLqvGDrILaVNG~sl~g~sh~eAV~lLk~sg 168 (684)
+..++|.+.+....+|||++.+|.+.. .+++|..|.++|||+++|.|++||+|++|||.++.++++.+++.+++..+
T Consensus 3 ~~~~~v~l~k~~~~~lG~~i~~~~~~~---~g~~V~~V~~~spA~~aggl~~GD~I~~ing~~v~~~~~~~~~~~~~~~~ 79 (90)
T 1qav_A 3 LQRRRVTVRKADAGGLGISIKGGRENK---MPILISKIFKGLAADQTEALFVGDAILSVNGEDLSSATHDEAVQALKKTG 79 (90)
T ss_dssp SSCEEEEEECCTTTCCCEEEEEEGGGT---EEEEEEEECTTSHHHHTTCCCTTEEEEEETTEECTTCCHHHHHHHHHTCC
T ss_pred CccEEEEEEeCCCCCcCEEEEcccCCC---CCEEEEEECCCCHHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC
Confidence 456789999988999999999876532 58999999999999999449999999999999999999999999999999
Q ss_pred CEEEEEEEec
Q psy2533 169 PIVTLEIAKQ 178 (684)
Q Consensus 169 ~~V~LvV~R~ 178 (684)
..+.|+|.|.
T Consensus 80 ~~v~l~v~r~ 89 (90)
T 1qav_A 80 KEVVLEVKYM 89 (90)
T ss_dssp SEEEEEEEEC
T ss_pred CeEEEEEEEe
Confidence 9999999874
No 32
>1ihj_A INAD; intermolecular disulfide bond, PDZ domain, signaling protein; 1.80A {Drosophila melanogaster} SCOP: b.36.1.1
Probab=99.44 E-value=3.7e-13 Score=116.88 Aligned_cols=90 Identities=20% Similarity=0.336 Sum_probs=79.6
Q ss_pred CceEEEEEecCCCcccEEEEeccCCCC---CcccEEEEEecCCChhcccCccccCCeeeecCCeecCCCCHHHHHHHHHc
Q psy2533 90 SMKSHSVRDMLRQEAKLSEMSEEGAGQ---DRLGIYIKSVVKGGAADANGRLQAGDQLLKVDGQSLVGITQEKAAEYLVR 166 (684)
Q Consensus 90 ~~~~V~v~k~~~~GLGfsI~GG~~~~~---~~~gIfIs~V~pGGpA~r~GrLqvGDrILaVNG~sl~g~sh~eAV~lLk~ 166 (684)
..+.|.+.|.+..+|||+|.+|.+... ...+++|..|.++|||+++|+|++||+|++|||.++.++++.+++.+|+.
T Consensus 5 ~~~~v~l~k~~~~glG~~i~~~~~~~~~~~~~~g~~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~~ 84 (98)
T 1ihj_A 5 LIHMVTLDKTGKKSFGICIVRGEVKDSPNTKTTGIFIKGIVPDSPAHLCGRLKVGDRILSLNGKDVRNSTEQAVIDLIKE 84 (98)
T ss_dssp EEEEEEEECTTSSSCCEEEEEEEECCSSSCCEEEEEEEEECTTSHHHHHCSCCTTCEEEEETTEECTTCCHHHHHHHHHH
T ss_pred eEEEEEEEeCCCCCcCEEEeccccCCccccCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHhc
Confidence 356788888788999999999876542 24589999999999999999999999999999999999999999999999
Q ss_pred CCCEEEEEEEecC
Q psy2533 167 TGPIVTLEIAKQG 179 (684)
Q Consensus 167 sg~~V~LvV~R~~ 179 (684)
.+..|.|+|.|..
T Consensus 85 ~g~~v~l~v~R~g 97 (98)
T 1ihj_A 85 ADFKIELEIQTFD 97 (98)
T ss_dssp SCSEEEEEEEEC-
T ss_pred CCCeEEEEEEeCC
Confidence 9999999999864
No 33
>2i1n_A Discs, large homolog 3; DLG3, PDZ, PDZ domain, signal transduction, structural genom structural genomics consortium, SGC, signaling protein; 1.85A {Homo sapiens} PDB: 2wl7_A 3rl7_B 1rgr_A* 1kef_A 1zok_A 1iu0_A 1iu2_A
Probab=99.44 E-value=5.9e-13 Score=116.62 Aligned_cols=90 Identities=24% Similarity=0.396 Sum_probs=78.3
Q ss_pred ceEEEEEecCCCcccEEEEeccCCCC--CcccEEEEEecCCChhcccCccccCCeeeecCCeecCCCCHHHHHHHHHcCC
Q psy2533 91 MKSHSVRDMLRQEAKLSEMSEEGAGQ--DRLGIYIKSVVKGGAADANGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTG 168 (684)
Q Consensus 91 ~~~V~v~k~~~~GLGfsI~GG~~~~~--~~~gIfIs~V~pGGpA~r~GrLqvGDrILaVNG~sl~g~sh~eAV~lLk~sg 168 (684)
.+.|.+.+ ...+|||+|.||.+.+. ...+++|..|.++|||+++|+|++||+|++|||.++.++++.+++.+++..+
T Consensus 5 ~~~v~l~k-~~~glG~~i~~g~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~g 83 (102)
T 2i1n_A 5 YEEIVLER-GNSGLGFSIAGGIDNPHVPDDPGIFITKIIPGGAAAMDGRLGVNDCVLRVNEVDVSEVVHSRAVEALKEAG 83 (102)
T ss_dssp EEEEEEEC-BTTBTSEEEEECTTSCSSTTCCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHHHSC
T ss_pred EEEEEEEE-CCCcCCEEEEcccCCCCcCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 34566655 47899999999876532 3568999999999999999999999999999999999999999999999999
Q ss_pred CEEEEEEEecCcc
Q psy2533 169 PIVTLEIAKQGAI 181 (684)
Q Consensus 169 ~~V~LvV~R~~~~ 181 (684)
..|.|+|.|....
T Consensus 84 ~~v~l~v~R~~~~ 96 (102)
T 2i1n_A 84 PVVRLVVRRRQPP 96 (102)
T ss_dssp SEEEEEEEEECCC
T ss_pred CeEEEEEEeCCCC
Confidence 9999999997643
No 34
>2fe5_A Presynaptic protein SAP102; PDZ domain, DLG3, human, structural genomics, structural GEN consortium, SGC, structural protein; HET: GOL; 1.10A {Homo sapiens} SCOP: b.36.1.1 PDB: 2x7z_A 2oqs_A 1qlc_A 2i0l_A
Probab=99.44 E-value=6.8e-13 Score=114.21 Aligned_cols=88 Identities=32% Similarity=0.476 Sum_probs=76.7
Q ss_pred ceEEEEEecCCCcccEEEEeccCCCC--CcccEEEEEecCCChhcccCccccCCeeeecCCeecCCCCHHHHHHHHHcCC
Q psy2533 91 MKSHSVRDMLRQEAKLSEMSEEGAGQ--DRLGIYIKSVVKGGAADANGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTG 168 (684)
Q Consensus 91 ~~~V~v~k~~~~GLGfsI~GG~~~~~--~~~gIfIs~V~pGGpA~r~GrLqvGDrILaVNG~sl~g~sh~eAV~lLk~sg 168 (684)
.++|.+.+. ..+|||+|.||.+.+. ...+++|..|.++|||+++|+|++||+|++|||.++.++++.+++.+++..+
T Consensus 4 ~~~v~l~k~-~~g~G~~i~gg~~~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~~ 82 (94)
T 2fe5_A 4 IMEVNLLKG-PKGLGFSIAGGIGNQHIPGDNSIYITKIIEGGAAQKDGRLQIGDRLLAVNNTNLQDVRHEEAVASLKNTS 82 (94)
T ss_dssp EEEEEEECC-TTCSCEEEEECBTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCBHHHHHHHHHTCC
T ss_pred EEEEEEEEC-CCCCCEEEEcccCCCCCCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 456777655 6789999999876542 3458999999999999999999999999999999999999999999999888
Q ss_pred CEEEEEEEecC
Q psy2533 169 PIVTLEIAKQG 179 (684)
Q Consensus 169 ~~V~LvV~R~~ 179 (684)
..|.|+|.|..
T Consensus 83 ~~v~l~v~R~g 93 (94)
T 2fe5_A 83 DMVYLKVAKPG 93 (94)
T ss_dssp SEEEEEEECCC
T ss_pred CeEEEEEEcCC
Confidence 89999998754
No 35
>1um1_A KIAA1849 protein, RSGI RUH-007; PDZ domain, human cDNA, structural genomics, riken structural genomics/proteomics initiative, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.43 E-value=7.3e-13 Score=117.73 Aligned_cols=92 Identities=23% Similarity=0.381 Sum_probs=80.6
Q ss_pred CCceEEEEEecCCCcccEEEEeccCCCCCcccEEEEEecCCChhcccCccccCCeeeecCCeecCCCCHHHHHHHHHcCC
Q psy2533 89 SSMKSHSVRDMLRQEAKLSEMSEEGAGQDRLGIYIKSVVKGGAADANGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTG 168 (684)
Q Consensus 89 s~~~~V~v~k~~~~GLGfsI~GG~~~~~~~~gIfIs~V~pGGpA~r~GrLqvGDrILaVNG~sl~g~sh~eAV~lLk~sg 168 (684)
....+|.+.+. ..+|||+|.+|.+......+++|..|.++|||+++|+|++||+|++|||.++.++++.+++.+++..+
T Consensus 7 ~~~~~v~l~~~-~~glG~~l~~g~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~~ 85 (110)
T 1um1_A 7 GYVFTVELERG-PSGLGMGLIDGMHTHLGAPGLYIQTLLPGSPAAADGRLSLGDRILEVNGSSLLGLGYLRAVDLIRHGG 85 (110)
T ss_dssp CCEEEEEEECC-TTCCCEEEEETTTSTTCCSSEEEEEECTTSHHHHHSCCCTTCEEEEESSCBCSSCCHHHHHHHHHTCC
T ss_pred CcEEEEEEEEC-CCccCEEEeCCcCCCCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 34566666654 47999999998776555678999999999999999999999999999999999999999999999999
Q ss_pred CEEEEEEEecCcc
Q psy2533 169 PIVTLEIAKQGAI 181 (684)
Q Consensus 169 ~~V~LvV~R~~~~ 181 (684)
..|.|+|.|....
T Consensus 86 ~~v~l~v~R~~~~ 98 (110)
T 1um1_A 86 KKMRFLVAKSDVE 98 (110)
T ss_dssp SEEEEEEECCCHH
T ss_pred CeEEEEEEeCCcc
Confidence 9999999998653
No 36
>3egg_C Spinophilin; PP1, serine/threonine phosphatase, post synapti density, glutametergic receptors, carbohydrate metabolism, cycle, cell division; HET: MES; 1.85A {Rattus norvegicus} PDB: 3egh_C* 3hvq_C 2fn5_A
Probab=99.43 E-value=4.3e-13 Score=129.85 Aligned_cols=86 Identities=36% Similarity=0.539 Sum_probs=74.4
Q ss_pred eEEEEEecCCCcccEEEEe---ccCCCCCcccEEEEEecCCChhcccCccccCCeeeecCCeecCCCCHHHHHHHHHcCC
Q psy2533 92 KSHSVRDMLRQEAKLSEMS---EEGAGQDRLGIYIKSVVKGGAADANGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTG 168 (684)
Q Consensus 92 ~~V~v~k~~~~GLGfsI~G---G~~~~~~~~gIfIs~V~pGGpA~r~GrLqvGDrILaVNG~sl~g~sh~eAV~lLk~sg 168 (684)
..|.+.+. ..||||+|.+ |........+|||..|.+||||+++|+|++||+|++|||.++.+++|.+++.+|+.++
T Consensus 82 ~~v~l~k~-~~glG~~i~g~~~g~~~~~~~~gi~V~~V~~gspA~~aG~L~~GD~Il~VNG~~v~~~~~~~~~~~l~~~g 160 (170)
T 3egg_C 82 FPVELEKD-SEGLGISIIGMGAGADMGLEKLGIFVKTVTEGGAAHRDGRIQVNDLLVEVDGTSLVGVTQSFAASVLRNTK 160 (170)
T ss_dssp EEEEEECB-TTBSSEEEEEECSSSSCCSSSBEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTBCHHHHHHHHHHCC
T ss_pred EEEEEEeC-CCeEeEEEEecccCCccccCCCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 34555544 4799999999 4333334578999999999999999999999999999999999999999999999999
Q ss_pred CEEEEEEEec
Q psy2533 169 PIVTLEIAKQ 178 (684)
Q Consensus 169 ~~V~LvV~R~ 178 (684)
..|.|+|.|.
T Consensus 161 ~~v~L~V~R~ 170 (170)
T 3egg_C 161 GRVRFMIGRE 170 (170)
T ss_dssp SEEEEEEEEC
T ss_pred CEEEEEEEeC
Confidence 9999999884
No 37
>2jik_A Synaptojanin-2 binding protein; transmembrane, outer membrane, mitochondria distribution, PDZ, membrane, scaffold, mitochondrion, membrane protein; 1.35A {Homo sapiens} PDB: 2jin_A
Probab=99.43 E-value=7.1e-13 Score=115.90 Aligned_cols=90 Identities=23% Similarity=0.395 Sum_probs=78.5
Q ss_pred CceEEEEEecCCCcccEEEEeccCCCC--CcccEEEEEecCCChhcccCccccCCeeeecCCeecCCCCHHHHHHHHHcC
Q psy2533 90 SMKSHSVRDMLRQEAKLSEMSEEGAGQ--DRLGIYIKSVVKGGAADANGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRT 167 (684)
Q Consensus 90 ~~~~V~v~k~~~~GLGfsI~GG~~~~~--~~~gIfIs~V~pGGpA~r~GrLqvGDrILaVNG~sl~g~sh~eAV~lLk~s 167 (684)
..+.|.+.+.. .+|||+|.+|.+... ...+++|..|.++|||+++|+|++||+|++|||.++.++++.+++.+++..
T Consensus 7 ~~~~v~l~~~~-~~lG~~l~~g~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~ 85 (101)
T 2jik_A 7 TEEEINLTRGP-SGLGFNIVGGTDQQYVSNDSGIYVSRIKENGAAALDGRLQEGDKILSVNGQDLKNLLHQDAVDLFRNA 85 (101)
T ss_dssp EEEEEEEECCT-TCCCEEEEECTTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHHTC
T ss_pred ccEEEEEEeCC-CCCCEEEeccccCCCccCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence 45677777654 899999999876542 245899999999999999999999999999999999999999999999988
Q ss_pred CCEEEEEEEecCc
Q psy2533 168 GPIVTLEIAKQGA 180 (684)
Q Consensus 168 g~~V~LvV~R~~~ 180 (684)
+..|.|+|.|...
T Consensus 86 g~~v~l~v~R~~~ 98 (101)
T 2jik_A 86 GYAVSLRVQHRLE 98 (101)
T ss_dssp CSEEEEEEEEESC
T ss_pred CCeEEEEEEeCCC
Confidence 8999999988753
No 38
>1v62_A KIAA1719 protein; structural genomics, synaptic transmission, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.43 E-value=6.1e-13 Score=120.28 Aligned_cols=90 Identities=21% Similarity=0.220 Sum_probs=80.4
Q ss_pred CCceEEEEEecCCCcccEEEEeccCCCCCcccEEEEEecCCChhcccCccccCCeeeecCCeecCCCCHHHHHHHHHcCC
Q psy2533 89 SSMKSHSVRDMLRQEAKLSEMSEEGAGQDRLGIYIKSVVKGGAADANGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTG 168 (684)
Q Consensus 89 s~~~~V~v~k~~~~GLGfsI~GG~~~~~~~~gIfIs~V~pGGpA~r~GrLqvGDrILaVNG~sl~g~sh~eAV~lLk~sg 168 (684)
...+.|.+.+..+.+|||+|.++.+.. ..++||..|.++|||+++|+|++||+|++|||.++.+++|.+++.+|+..+
T Consensus 14 ~~~~~v~l~k~~~~~lG~~i~~~~~~~--~~~~~V~~V~~~spA~~aG~l~~GD~Il~Ing~~v~~~~~~~~~~~l~~~g 91 (117)
T 1v62_A 14 SGPLMVEIVKTPGSALGISLTTTSLRN--KSVITIDRIKPASVVDRSGALHPGDHILSIDGTSMEHCSLLEATKLLASIS 91 (117)
T ss_dssp SSSEEEEEECCTTCCCCCEEEEECCSS--SCEEEEEECCTTSHHHHHTCCCTTCBEEEETTEETTSCCHHHHHHHHHSCS
T ss_pred CCcEEEEEEcCCCCcccEEEEccCCCC--CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC
Confidence 456788888888899999999875532 236999999999999999999999999999999999999999999999889
Q ss_pred CEEEEEEEecCc
Q psy2533 169 PIVTLEIAKQGA 180 (684)
Q Consensus 169 ~~V~LvV~R~~~ 180 (684)
..|.|+|.|...
T Consensus 92 ~~v~l~v~r~~~ 103 (117)
T 1v62_A 92 EKVRLEILPVPQ 103 (117)
T ss_dssp SEEEEEECCBTT
T ss_pred CeEEEEEEECCC
Confidence 999999998764
No 39
>1uhp_A Hypothetical protein KIAA1095; PDZ domain, semaphorin cytoplasmic domain associated protein, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.43 E-value=5.4e-13 Score=118.19 Aligned_cols=92 Identities=16% Similarity=0.306 Sum_probs=78.2
Q ss_pred CCCceEEEEEecCCCcccEEEEeccCCC-----CCcccEEEEEecCCChhcccCccccCCeeeecCCeecCCCCHHHHHH
Q psy2533 88 DSSMKSHSVRDMLRQEAKLSEMSEEGAG-----QDRLGIYIKSVVKGGAADANGRLQAGDQLLKVDGQSLVGITQEKAAE 162 (684)
Q Consensus 88 ~s~~~~V~v~k~~~~GLGfsI~GG~~~~-----~~~~gIfIs~V~pGGpA~r~GrLqvGDrILaVNG~sl~g~sh~eAV~ 162 (684)
++...+|.+.|. ..+|||+|.+|.+.. ....++||..|.++|||+++|.|++||+|++|||+++.+++|.+++.
T Consensus 6 ~~~~~~v~l~k~-~~~lG~~i~g~~~~~~~~~~~~~~gv~V~~V~~~spA~~aggL~~GD~Il~vng~~v~~~~~~~~~~ 84 (107)
T 1uhp_A 6 SGKSLTLVLHRD-SGSLGFNIIGGRPSVDNHDGSSSEGIFVSKIVDSGPAAKEGGLQIHDRIIEVNGRDLSRATHDQAVE 84 (107)
T ss_dssp SSEEEEEEECCS-SSCCSEEEECCCSCCCCTTSSCSCCCEEEEECSSSHHHHTTCCCSSCEEEEETTEECTTCCHHHHHH
T ss_pred CcEEEEEEEEeC-CCccCEEEEcCCCCcccccccCCCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHH
Confidence 345666777664 789999999986431 13468999999999999999449999999999999999999999999
Q ss_pred HHHcCCCEEEEEEEecCc
Q psy2533 163 YLVRTGPIVTLEIAKQGA 180 (684)
Q Consensus 163 lLk~sg~~V~LvV~R~~~ 180 (684)
+|+..+..|.|+|.|..+
T Consensus 85 ~~~~~~~~v~l~v~R~~~ 102 (107)
T 1uhp_A 85 AFKTAKEPIVVQVLRRTS 102 (107)
T ss_dssp HHHHCCSSEEEEEEECCS
T ss_pred HHHcCCCcEEEEEEeCCC
Confidence 999999999999998764
No 40
>2vwr_A Ligand of NUMB protein X 2; protein-binding, metal-binding, zinc, LNX2_human, zinc-finger, polymorphism, ring finger protein 1; 1.3A {Homo sapiens}
Probab=99.43 E-value=6e-13 Score=115.14 Aligned_cols=86 Identities=26% Similarity=0.431 Sum_probs=76.2
Q ss_pred ceEEEEEec-CCCcccEEEEeccCCCCCcccEEEEEecCCChhcccCccccCCeeeecCCeecCCCCHHHHHHHHHcCCC
Q psy2533 91 MKSHSVRDM-LRQEAKLSEMSEEGAGQDRLGIYIKSVVKGGAADANGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGP 169 (684)
Q Consensus 91 ~~~V~v~k~-~~~GLGfsI~GG~~~~~~~~gIfIs~V~pGGpA~r~GrLqvGDrILaVNG~sl~g~sh~eAV~lLk~sg~ 169 (684)
...|.+.|. ++.+|||++.++.+. .|++|..|.++|||+++|+|++||+|++|||.++.++++.+++.+++..+.
T Consensus 4 ~~~v~l~k~~~~~~lG~~~~~~~~~----~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~g~ 79 (95)
T 2vwr_A 4 ILQVALHKRDSGEQLGIKLVRRTDE----PGVFILDLLEGGLAAQDGRLSSNDRVLAINGHDLKYGTPELAAQIIQASGE 79 (95)
T ss_dssp EEEEEEECSSTTCCCCEEEEECSSS----CSEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHCCS
T ss_pred EEEEEEEECCCCCcccEEEEeccCC----CCEEEEEeCCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCC
Confidence 356777775 567999999987542 489999999999999999999999999999999999999999999999999
Q ss_pred EEEEEEEecCc
Q psy2533 170 IVTLEIAKQGA 180 (684)
Q Consensus 170 ~V~LvV~R~~~ 180 (684)
.|.|+|.|...
T Consensus 80 ~v~l~v~R~~~ 90 (95)
T 2vwr_A 80 RVNLTIARPGK 90 (95)
T ss_dssp EEEEEEEEESC
T ss_pred EEEEEEEcCCc
Confidence 99999998754
No 41
>4e34_A Golgi-associated PDZ and coiled-coil motif-contai protein; PDZ-peptide complex, protein transport-inhibitor complex; 1.40A {Homo sapiens} PDB: 4e35_A
Probab=99.43 E-value=5.6e-13 Score=113.36 Aligned_cols=83 Identities=22% Similarity=0.316 Sum_probs=74.8
Q ss_pred ceEEEEEecCCCcccEEEEeccCCCCCcccEEEEEecCCChhccc-CccccCCeeeecCCeecCCCCHHHHHHHHHcCCC
Q psy2533 91 MKSHSVRDMLRQEAKLSEMSEEGAGQDRLGIYIKSVVKGGAADAN-GRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGP 169 (684)
Q Consensus 91 ~~~V~v~k~~~~GLGfsI~GG~~~~~~~~gIfIs~V~pGGpA~r~-GrLqvGDrILaVNG~sl~g~sh~eAV~lLk~sg~ 169 (684)
.++|.+.+....+|||++.+|.+.. .+++|..|.++|||+++ | |++||+|++|||.++.+++|.+++.+++..+.
T Consensus 3 ~~~v~l~~~~~~~lG~~i~~~~~~~---~~~~V~~V~~gspA~~~ag-l~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~ 78 (87)
T 4e34_A 3 IRKVLLLKEDHEGLGISITGGKEHG---VPILISEIHPGQPADRCGG-LHVGDAILAVNGVNLRDTKHKEAVTILSQQRG 78 (87)
T ss_dssp CEEEEEECCTTBCCCEEEEEEGGGT---EEEEEEEECTTSHHHHHSC-CCTTEEEEEETTEECTTCCHHHHHHHHHHCCS
T ss_pred EEEEEEEECCCCcccEEEEccCCCC---CCEEEEEECCCCHHHhcCC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCC
Confidence 5678888888899999999986543 47999999999999995 6 99999999999999999999999999999999
Q ss_pred EEEEEEEe
Q psy2533 170 IVTLEIAK 177 (684)
Q Consensus 170 ~V~LvV~R 177 (684)
.+.|+|.+
T Consensus 79 ~v~l~v~~ 86 (87)
T 4e34_A 79 EIEFEVVY 86 (87)
T ss_dssp EEEEEEEE
T ss_pred eEEEEEEE
Confidence 99998865
No 42
>1wf8_A Neurabin-I; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.42 E-value=9.1e-13 Score=116.71 Aligned_cols=89 Identities=36% Similarity=0.542 Sum_probs=76.8
Q ss_pred ceEEEEEecCCCcccEEEEe---ccCCCCCcccEEEEEecCCChhcccCccccCCeeeecCCeecCCCCHHHHHHHHHcC
Q psy2533 91 MKSHSVRDMLRQEAKLSEMS---EEGAGQDRLGIYIKSVVKGGAADANGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRT 167 (684)
Q Consensus 91 ~~~V~v~k~~~~GLGfsI~G---G~~~~~~~~gIfIs~V~pGGpA~r~GrLqvGDrILaVNG~sl~g~sh~eAV~lLk~s 167 (684)
...|.+.+ ...+|||+|.+ |.+......++||..|.++|||+++|+|++||+|++|||.++.++++.+++.+++..
T Consensus 10 ~~~v~l~k-~~~glG~~i~~~~~g~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~ 88 (107)
T 1wf8_A 10 LFPVELEK-DEDGLGISIIGMGVGADAGLEKLGIFVKTVTEGGAAQRDGRIQVNDQIVEVDGISLVGVTQNFAATVLRNT 88 (107)
T ss_dssp EEEEEEEC-BTTBSCEEEEEEEESCCTTCCEEEEEEEEECTTCHHHHHCSSCTTCBEEEETTEECBSCCHHHHHHHHHHC
T ss_pred EEEEEEEE-CCCcccEEEEecCCCCCCCCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHhcC
Confidence 44455544 46799999999 444444567999999999999999999999999999999999999999999999999
Q ss_pred CCEEEEEEEecCc
Q psy2533 168 GPIVTLEIAKQGA 180 (684)
Q Consensus 168 g~~V~LvV~R~~~ 180 (684)
+..|.|+|.|...
T Consensus 89 ~~~v~l~v~R~~~ 101 (107)
T 1wf8_A 89 KGNVRFVIGREKP 101 (107)
T ss_dssp CSEEEEEEEEECC
T ss_pred CCeEEEEEEeCCC
Confidence 9999999998754
No 43
>1wg6_A Hypothetical protein (riken cDNA 2810455B10); structural genomics, PDZ domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.36.1.1 PDB: 2koh_A 2k1z_A 2k20_A
Probab=99.42 E-value=3.1e-13 Score=124.17 Aligned_cols=83 Identities=34% Similarity=0.531 Sum_probs=73.3
Q ss_pred ecCCCcccEEEEeccCCCC-CcccEEEEEecCCChhcccCccccCCeeeecCCeecCCCCHHHHHHHHHcC-------CC
Q psy2533 98 DMLRQEAKLSEMSEEGAGQ-DRLGIYIKSVVKGGAADANGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRT-------GP 169 (684)
Q Consensus 98 k~~~~GLGfsI~GG~~~~~-~~~gIfIs~V~pGGpA~r~GrLqvGDrILaVNG~sl~g~sh~eAV~lLk~s-------g~ 169 (684)
+....+|||+|.++.+... ...++||..|.++|||+++|+|++||+|++|||+++.+++|.+++.+|+.+ +.
T Consensus 33 k~~~~glG~~i~~~~~~~~~~~~gi~V~~V~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~~g~~~~ 112 (127)
T 1wg6_A 33 DSGSAGLGVSLKGNKSRETGTDLGIFIKSIIHGGAAFKDGRLRMNDQLIAVNGETLLGKSNHEAMETLRRSMSMEGNIRG 112 (127)
T ss_dssp SSTTTCCCCEEEEEEETTTTEEEEEEEEECCSSSSTHHHHTSCSCCBEEEETTEESTTSCHHHHHHHHHHHHHHHHHHTC
T ss_pred eCCCCccCeEEecccCCCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHHhhccccCCCC
Confidence 4678899999998865321 235899999999999999999999999999999999999999999999976 78
Q ss_pred EEEEEEEecCc
Q psy2533 170 IVTLEIAKQGA 180 (684)
Q Consensus 170 ~V~LvV~R~~~ 180 (684)
.|.|+|.|...
T Consensus 113 ~v~l~v~R~~~ 123 (127)
T 1wg6_A 113 MIQLVILRRSG 123 (127)
T ss_dssp EEEEEEEECSC
T ss_pred EEEEEEEeCCC
Confidence 99999999764
No 44
>1x6d_A Interleukin-16; PDZ domain, lymphocyte chemoattractant factor (LCF), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.2
Probab=99.41 E-value=1.2e-12 Score=118.14 Aligned_cols=90 Identities=18% Similarity=0.243 Sum_probs=76.7
Q ss_pred CCceEEEEEecCCCcccEEEEeccCCCCCcccEEEEEecCCChhcccCccccCCeeeecCCeecCCCCHHHHHHHHHcCC
Q psy2533 89 SSMKSHSVRDMLRQEAKLSEMSEEGAGQDRLGIYIKSVVKGGAADANGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTG 168 (684)
Q Consensus 89 s~~~~V~v~k~~~~GLGfsI~GG~~~~~~~~gIfIs~V~pGGpA~r~GrLqvGDrILaVNG~sl~g~sh~eAV~lLk~sg 168 (684)
.....+.+.+....+|||+|.||.+.. ..+++|..|.++|||+++|+|++||+|++|||.++.+++|.+++.+|+..+
T Consensus 14 ~~~~~v~l~~~~~~~lG~~i~g~~~~~--~~gv~V~~V~~~spA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~~~ 91 (119)
T 1x6d_A 14 DGIHVTILHKEEGAGLGFSLAGGADLE--NKVITVHRVFPNGLASQEGTIQKGNEVLSINGKSLKGTTHHDALAILRQAR 91 (119)
T ss_dssp TTEEEEEEECCTTSCCSEEEECCSSSS--CSSCEEEEECSSSHHHHHTSSCTTCBCCEETTEECSSCCHHHHHHHHHHTT
T ss_pred CCeEEEEEEeCCCCccCEEEeCCCCCC--CCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC
Confidence 446667777878999999999886542 358999999999999999999999999999999999999999999999876
Q ss_pred CE-EEEEEEecCc
Q psy2533 169 PI-VTLEIAKQGA 180 (684)
Q Consensus 169 ~~-V~LvV~R~~~ 180 (684)
.. +.|+|.|...
T Consensus 92 ~~~~~l~v~R~~~ 104 (119)
T 1x6d_A 92 EPRQAVIVTRKLT 104 (119)
T ss_dssp SSSEEEEEEECCC
T ss_pred CCeEEEEEEcCCC
Confidence 55 5577777654
No 45
>1uju_A Scribble; PDZ domain, cellular signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI, signaling protein; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.41 E-value=3.7e-13 Score=119.96 Aligned_cols=90 Identities=27% Similarity=0.392 Sum_probs=79.4
Q ss_pred CceEEEEEecCCCcccEEEEeccCCC------CCcccEEEEEecCCChhcccCccccCCeeeecCCeecCCCCHHHHHHH
Q psy2533 90 SMKSHSVRDMLRQEAKLSEMSEEGAG------QDRLGIYIKSVVKGGAADANGRLQAGDQLLKVDGQSLVGITQEKAAEY 163 (684)
Q Consensus 90 ~~~~V~v~k~~~~GLGfsI~GG~~~~------~~~~gIfIs~V~pGGpA~r~GrLqvGDrILaVNG~sl~g~sh~eAV~l 163 (684)
..+.|.+.+..+.+|||+|.+|.+.. ....+++|..|.++|||+++|+|++||+|++|||.++.++++.+++.+
T Consensus 9 ~~~~v~l~k~~~~~lG~~i~gg~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~ 88 (111)
T 1uju_A 9 GLRELCIQKAPGERLGISIRGGARGHAGNPRDPTDEGIFISKVSPTGAAGRDGRLRVGLRLLEVNQQSLLGLTHGEAVQL 88 (111)
T ss_dssp SSSCEEEECCTTCCCCEEEECCSSSSCSCSSCTTCCCCEEEEECTTSHHHHHSSCCTTCBCCBBSSCBCTTSCHHHHHHH
T ss_pred ccEEEEEEECCCCccCEEEECCccccccccccCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHH
Confidence 35678888888899999999986431 224589999999999999999999999999999999999999999999
Q ss_pred HHcCCCEEEEEEEecC
Q psy2533 164 LVRTGPIVTLEIAKQG 179 (684)
Q Consensus 164 Lk~sg~~V~LvV~R~~ 179 (684)
|+..+..|.|+|.|..
T Consensus 89 l~~~g~~v~l~v~r~~ 104 (111)
T 1uju_A 89 LRSVGDTLTVLVCDGF 104 (111)
T ss_dssp HSSCSSEEEECCCCCC
T ss_pred HHcCCCeEEEEEEECC
Confidence 9999999999998865
No 46
>3hpk_A Protein interacting with PRKCA 1; oxidized, PDZ domain, kinase, protein binding; 2.20A {Rattus norvegicus} PDB: 3hpm_A
Probab=99.41 E-value=9.3e-13 Score=119.90 Aligned_cols=90 Identities=20% Similarity=0.230 Sum_probs=80.2
Q ss_pred CCCCceEEEEEecCCCcccEEEEeccCCCCCcccEEEEEecCCChhcccCccccCCeeeecCCeecCCCCHHHHHHHHHc
Q psy2533 87 LDSSMKSHSVRDMLRQEAKLSEMSEEGAGQDRLGIYIKSVVKGGAADANGRLQAGDQLLKVDGQSLVGITQEKAAEYLVR 166 (684)
Q Consensus 87 ~~s~~~~V~v~k~~~~GLGfsI~GG~~~~~~~~gIfIs~V~pGGpA~r~GrLqvGDrILaVNG~sl~g~sh~eAV~lLk~ 166 (684)
.....++|.+.+....+|||+|.||.+.. .+++|..|.+||||+++|+|++||+|++|||.++.+++|.+++.+|+.
T Consensus 16 ~~~~~~~v~l~k~~~~~lG~~i~gg~~~~---~~~~V~~v~~gspA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~ 92 (125)
T 3hpk_A 16 IPTVPGKVTLQKDAQNLIGISIGGGAQYC---PCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQE 92 (125)
T ss_dssp CCEEEEEEEEECCTTSCCCEEEEECSSCC---SSEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHH
T ss_pred CcCCCeEEEEEeCCCCCcCEEEeccCCCC---CCEEEEEeCCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 33456778888888899999999986533 579999999999999999999999999999999999999999999999
Q ss_pred CCCEEEEEEEecC
Q psy2533 167 TGPIVTLEIAKQG 179 (684)
Q Consensus 167 sg~~V~LvV~R~~ 179 (684)
.++.|.|+|.|..
T Consensus 93 ~~~~v~l~v~r~~ 105 (125)
T 3hpk_A 93 VKGEVTIHYNKLQ 105 (125)
T ss_dssp SCSEEEEEEEEEC
T ss_pred CCCeEEEEEEECC
Confidence 9999999998843
No 47
>3o46_A Maguk P55 subfamily member 7; PDZ domain, structural genomics consortium, SGC, protein BIN; 1.30A {Homo sapiens} SCOP: b.36.1.0
Probab=99.40 E-value=1.1e-12 Score=113.19 Aligned_cols=86 Identities=23% Similarity=0.358 Sum_probs=74.9
Q ss_pred CCceEEEEEecCCCcccEEEEeccCCCCCcccEEEEEecCCChhcccCccccCCeeeecCCeecCCCCHHHHHHHHHcCC
Q psy2533 89 SSMKSHSVRDMLRQEAKLSEMSEEGAGQDRLGIYIKSVVKGGAADANGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTG 168 (684)
Q Consensus 89 s~~~~V~v~k~~~~GLGfsI~GG~~~~~~~~gIfIs~V~pGGpA~r~GrLqvGDrILaVNG~sl~g~sh~eAV~lLk~sg 168 (684)
...+.|.+.|. +.+|||++.++. ...+++|..|.++|||+++|+|++||+|++|||.++.+++|.+++.+|+..+
T Consensus 3 ~~~r~v~l~k~-~~~lG~~i~~~~----~~~~~~V~~v~~gspA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~~~~ 77 (93)
T 3o46_A 3 DSVKIIRLVKN-REPLGATIKKDE----QTGAIIVARIMRGGAADRSGLIHVGDELREVNGIPVEDKRPEEIIQILAQSQ 77 (93)
T ss_dssp -CCEEEEEEES-SSCCCEEEEECT----TTCCEEEEEECTTSHHHHHTCCCTTCEEEEETTEESTTSCHHHHHHHHHHCC
T ss_pred ccEEEEEEEeC-CCCccEEEEecC----CCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC
Confidence 35677888876 469999999762 1347999999999999999999999999999999999999999999999998
Q ss_pred CEEEEEEEecC
Q psy2533 169 PIVTLEIAKQG 179 (684)
Q Consensus 169 ~~V~LvV~R~~ 179 (684)
+.|.|+|.+..
T Consensus 78 ~~v~l~v~~~~ 88 (93)
T 3o46_A 78 GAITFKIIPGS 88 (93)
T ss_dssp EEEEEEEECC-
T ss_pred CeEEEEEEeCC
Confidence 89999998754
No 48
>1kwa_A Hcask/LIN-2 protein; PDZ domain, neurexin, syndecan, receptor clustering, kinase; 1.93A {Homo sapiens} SCOP: b.36.1.1
Probab=99.40 E-value=9.1e-13 Score=113.39 Aligned_cols=84 Identities=17% Similarity=0.242 Sum_probs=74.3
Q ss_pred ceEEEEEecCCCcccEEEEeccCCCCCcccEEEEEecCCChhcccCccccCCeeeecCCeecCCCCHHHHHHHHHcCCCE
Q psy2533 91 MKSHSVRDMLRQEAKLSEMSEEGAGQDRLGIYIKSVVKGGAADANGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGPI 170 (684)
Q Consensus 91 ~~~V~v~k~~~~GLGfsI~GG~~~~~~~~gIfIs~V~pGGpA~r~GrLqvGDrILaVNG~sl~g~sh~eAV~lLk~sg~~ 170 (684)
.+.|.+.|.++.+|||+|.++. ..+++|..|.++|||++++.|++||+|++|||.++.+++|.+++.+|+...+.
T Consensus 2 ~r~V~l~K~~~~~lG~~i~~~~-----~~~~~I~~V~~gspA~~~agL~~GD~I~~Ing~~v~~~~~~~~~~~l~~~~~~ 76 (88)
T 1kwa_A 2 SRLVQFQKNTDEPMGITLKMNE-----LNHCIVARIMHGGMIHRQGTLHVGDEIREINGISVANQTVEQLQKMLREMRGS 76 (88)
T ss_dssp CEEEEEEECSSSCCCEEEECSC-----GGGEEEEEECTTSHHHHHTCCCTTCEEEEETTEEGGGSCHHHHHHHHHHCCEE
T ss_pred eEEEEEEeCCCCceeEEEEeCC-----CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHhcCCCc
Confidence 4678899988899999998742 24799999999999999555999999999999999999999999999988778
Q ss_pred EEEEEEecC
Q psy2533 171 VTLEIAKQG 179 (684)
Q Consensus 171 V~LvV~R~~ 179 (684)
|.|+|.|..
T Consensus 77 v~l~v~r~~ 85 (88)
T 1kwa_A 77 ITFKIVPSY 85 (88)
T ss_dssp EEEEEECCC
T ss_pred EEEEEECCc
Confidence 999998764
No 49
>2q3g_A PDZ and LIM domain protein 7; structural genomics, structural genomics consortium, SGC; 1.11A {Homo sapiens}
Probab=99.40 E-value=1.1e-12 Score=112.25 Aligned_cols=84 Identities=19% Similarity=0.234 Sum_probs=74.1
Q ss_pred eEEEEEecCCCcccEEEEeccCCCCCcccEEEEEecCCChhcccCccccCCeeeecCCeecCCCCHHHHHHHHHcCCCEE
Q psy2533 92 KSHSVRDMLRQEAKLSEMSEEGAGQDRLGIYIKSVVKGGAADANGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGPIV 171 (684)
Q Consensus 92 ~~V~v~k~~~~GLGfsI~GG~~~~~~~~gIfIs~V~pGGpA~r~GrLqvGDrILaVNG~sl~g~sh~eAV~lLk~sg~~V 171 (684)
..+.+......+|||+|.||.+.. .+++|..|.++|||+++| |++||+|++|||.++.++++.+++.+++..+..+
T Consensus 3 ~~~~v~~~~~~~~G~~l~gg~~~~---~~v~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~~~~~g~~v 78 (89)
T 2q3g_A 3 DSFKVVLEGPAPWGFRLQGGKDFN---VPLSISRLTPGGKAAQAG-VAVGDWVLSIDGENAGSLTHIEAQNKIRACGERL 78 (89)
T ss_dssp EEEEEEEESSSCCCEEEEEEGGGT---EEEEEEEECTTSHHHHTT-CCTTCEEEEETTEEGGGCCHHHHHHHHHTCTTEE
T ss_pred cEEEEEEcCCCcccEEEECcCCCC---CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCEE
Confidence 445555567789999999886532 479999999999999999 9999999999999999999999999999888999
Q ss_pred EEEEEecC
Q psy2533 172 TLEIAKQG 179 (684)
Q Consensus 172 ~LvV~R~~ 179 (684)
.|+|.|..
T Consensus 79 ~l~v~R~~ 86 (89)
T 2q3g_A 79 SLGLSRAI 86 (89)
T ss_dssp EEEEEEEC
T ss_pred EEEEEeCC
Confidence 99998865
No 50
>1q7x_A PDZ2B domain of PTP-BAS (HPTP1E); phosphatase, structural proteomics in europe, spine, structural genomics, hydrolase; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.40 E-value=7.5e-13 Score=117.26 Aligned_cols=91 Identities=31% Similarity=0.469 Sum_probs=80.0
Q ss_pred CCceEEEEEecCCCcccEEEE-----eccCCCCCcccEEEEEecCCChhcccCccccCCeeeecCCeecCCCCHHHHHHH
Q psy2533 89 SSMKSHSVRDMLRQEAKLSEM-----SEEGAGQDRLGIYIKSVVKGGAADANGRLQAGDQLLKVDGQSLVGITQEKAAEY 163 (684)
Q Consensus 89 s~~~~V~v~k~~~~GLGfsI~-----GG~~~~~~~~gIfIs~V~pGGpA~r~GrLqvGDrILaVNG~sl~g~sh~eAV~l 163 (684)
....+|.+.+ ...+|||+|. ||.+......+++|..|.++|||+++|+|++||+|++|||.++.++++.+++.+
T Consensus 8 ~~~~~v~l~k-~~~~lG~~i~~~~~~gg~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~ 86 (108)
T 1q7x_A 8 GDIFEVELAK-NDNSLGISVTVLFDKGGVNTSVRHGGIYVKAVIPQGAAESDGRIHKGDRVLAVNGVSLEGATHKQAVET 86 (108)
T ss_dssp SSEEEEEEES-SSCSCCEEESSSSSSBCBCTTSSSCCCBEEEECTTSTHHHHTCCCSSCEEEEETTEECBSCTTSHHHHH
T ss_pred CcEEEEEEEE-CCCCccEEEEEeccCCCccccCCCCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHH
Confidence 3456666665 4689999999 887765556789999999999999999999999999999999999999999999
Q ss_pred HHcCCCEEEEEEEecCc
Q psy2533 164 LVRTGPIVTLEIAKQGA 180 (684)
Q Consensus 164 Lk~sg~~V~LvV~R~~~ 180 (684)
++..+..|.|+|.|...
T Consensus 87 ~~~~g~~v~l~v~R~~~ 103 (108)
T 1q7x_A 87 LRNTGQVVHLLLEKGQS 103 (108)
T ss_dssp HHHTTSEEEEEEECCCC
T ss_pred HHcCCCeEEEEEEeCCc
Confidence 99999999999998754
No 51
>2eno_A Synaptojanin-2-binding protein; mitochondrial outer membrane protein 25, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.39 E-value=1.3e-12 Score=118.16 Aligned_cols=90 Identities=23% Similarity=0.395 Sum_probs=78.5
Q ss_pred CceEEEEEecCCCcccEEEEeccCCCC--CcccEEEEEecCCChhcccCccccCCeeeecCCeecCCCCHHHHHHHHHcC
Q psy2533 90 SMKSHSVRDMLRQEAKLSEMSEEGAGQ--DRLGIYIKSVVKGGAADANGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRT 167 (684)
Q Consensus 90 ~~~~V~v~k~~~~GLGfsI~GG~~~~~--~~~gIfIs~V~pGGpA~r~GrLqvGDrILaVNG~sl~g~sh~eAV~lLk~s 167 (684)
..+.|.+.+.. .+|||+|.+|.+... ...+++|..|.++|||+++|+|++||+|++|||.++.+++|.+++.+++..
T Consensus 17 ~~~~v~l~r~~-~~lG~~i~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~~~~~ 95 (120)
T 2eno_A 17 TEEEINLTRGP-SGLGFNIVGGTDQQYVSNDSGIYVSRIKENGAAALDGRLQEGDKILSVNGQDLKNLLHQDAVDLFRNA 95 (120)
T ss_dssp EEEEEEEECCS-SSCSEEEECCTTTCSSSSCCSEEEEEECSSSHHHHSCCSCTTCEEEEETTEECCSCCHHHHHHHHHHH
T ss_pred ceEEEEEEECC-CCCCEEEecccCCccccCCCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 45667776655 899999999866432 245899999999999999999999999999999999999999999999988
Q ss_pred CCEEEEEEEecCc
Q psy2533 168 GPIVTLEIAKQGA 180 (684)
Q Consensus 168 g~~V~LvV~R~~~ 180 (684)
+..|.|+|.|...
T Consensus 96 g~~v~l~v~R~~~ 108 (120)
T 2eno_A 96 GYAVSLRVQHRLQ 108 (120)
T ss_dssp CSEEEEEEEEEEE
T ss_pred CCeEEEEEEeCCc
Confidence 8999999999765
No 52
>2q9v_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; Cys Ser mutant, S genomics consortium, SGC, transferase; 2.00A {Homo sapiens}
Probab=99.39 E-value=7.6e-13 Score=113.21 Aligned_cols=85 Identities=25% Similarity=0.417 Sum_probs=73.3
Q ss_pred ceEEEEEecCCCcccEEEEeccCCCCCcccEEEEEecCCChhcccCccccCCeeeecCCeecCCCCHHHHHHHHHcCC--
Q psy2533 91 MKSHSVRDMLRQEAKLSEMSEEGAGQDRLGIYIKSVVKGGAADANGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTG-- 168 (684)
Q Consensus 91 ~~~V~v~k~~~~GLGfsI~GG~~~~~~~~gIfIs~V~pGGpA~r~GrLqvGDrILaVNG~sl~g~sh~eAV~lLk~sg-- 168 (684)
.+++.+.+. ..+|||++.+|.+.. .+++|..|.++|||+++|+|++||+|++|||.++.++++.+++.+|+..+
T Consensus 3 ~~~v~l~~~-~~g~G~~~~~g~~~~---~~~~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~ 78 (90)
T 2q9v_A 3 EQDIFLWRK-ETGFGFRILGGNEPG---EPIYIGHIVPLGAADTDGRLRSGDELISVDGTPVIGKSHQLVVQLMQQAAKQ 78 (90)
T ss_dssp EEEEEEECB-TTBCCEEEEECSSTT---SCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTSCHHHHHHHHHHHHHH
T ss_pred cEEEEEEEC-CCccCEEEEccccCC---CCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCC
Confidence 456666655 478999999886543 46999999999999999999999999999999999999999999999874
Q ss_pred CEEEEEEEecC
Q psy2533 169 PIVTLEIAKQG 179 (684)
Q Consensus 169 ~~V~LvV~R~~ 179 (684)
..|.|+|.|..
T Consensus 79 ~~v~l~v~R~~ 89 (90)
T 2q9v_A 79 GHVNLTVRQTR 89 (90)
T ss_dssp TEEEEEEEECC
T ss_pred CeEEEEEEecc
Confidence 48999998863
No 53
>2uzc_A Human pdlim5, PDZ and LIM domain 5; metal-binding, enigma homolog, phosphorylation, signaling PR LIM domain, PDZ domain; 1.5A {Homo sapiens}
Probab=99.39 E-value=1.4e-12 Score=111.09 Aligned_cols=83 Identities=18% Similarity=0.244 Sum_probs=72.9
Q ss_pred EEEEEecCCCcccEEEEeccCCCCCcccEEEEEecCCChhcccCccccCCeeeecCCeecCCCCHHHHHHHHHcCCCEEE
Q psy2533 93 SHSVRDMLRQEAKLSEMSEEGAGQDRLGIYIKSVVKGGAADANGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGPIVT 172 (684)
Q Consensus 93 ~V~v~k~~~~GLGfsI~GG~~~~~~~~gIfIs~V~pGGpA~r~GrLqvGDrILaVNG~sl~g~sh~eAV~lLk~sg~~V~ 172 (684)
++.+..+...+|||++.+|.+.. .+++|..|.++|||+++| |++||+|++|||.++.+++|.+++.+++..+..|.
T Consensus 4 ~~~v~l~~~~~~G~~l~~g~~~~---~~~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~~~~~g~~v~ 79 (88)
T 2uzc_A 4 NYSVSLVGPAPWGFRLQGGKDFN---MPLTISSLKDGGKAAQAN-VRIGDVVLSIDGINAQGMTHLEAQNKIKGCTGSLN 79 (88)
T ss_dssp EEEEEEESSSCCCEEEEEEGGGT---EEEEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHHHTCCSEEE
T ss_pred EEEEEEcCCCcccEEEECcCCCC---CCeEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEE
Confidence 34444466789999999987643 479999999999999999 99999999999999999999999999998889999
Q ss_pred EEEEecC
Q psy2533 173 LEIAKQG 179 (684)
Q Consensus 173 LvV~R~~ 179 (684)
|+|.|..
T Consensus 80 l~v~R~g 86 (88)
T 2uzc_A 80 MTLQRES 86 (88)
T ss_dssp EEEECCC
T ss_pred EEEEeCC
Confidence 9998865
No 54
>2pa1_A PDZ and LIM domain protein 2; PDZ domain, structural genomics, structural genomics consort metal binding protein; 1.70A {Homo sapiens} PDB: 3pdv_A
Probab=99.39 E-value=1.5e-12 Score=110.92 Aligned_cols=83 Identities=16% Similarity=0.223 Sum_probs=75.1
Q ss_pred EEEEEecCCCcccEEEEeccCCCCCcccEEEEEecCCChhcccCccccCCeeeecCCeecCCCCHHHHHHHHHcCCCEEE
Q psy2533 93 SHSVRDMLRQEAKLSEMSEEGAGQDRLGIYIKSVVKGGAADANGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGPIVT 172 (684)
Q Consensus 93 ~V~v~k~~~~GLGfsI~GG~~~~~~~~gIfIs~V~pGGpA~r~GrLqvGDrILaVNG~sl~g~sh~eAV~lLk~sg~~V~ 172 (684)
++++.++...+|||++.+|.+. ..+++|..|.++|||+++| |++||+|++|||.++.++++.+++.+|+..+..|.
T Consensus 3 ~~~v~~~~~~~lG~~l~~~~~~---~~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v~ 78 (87)
T 2pa1_A 3 ALTVDVAGPAPWGFRITGGRDF---HTPIMVTKVAERGKAKDAD-LRPGDIIVAINGESAEGMLHAEAQSKIRQSPSPLR 78 (87)
T ss_dssp EEEEEECSSSCCSEEEEEEGGG---TEEEEEEEECSSSHHHHTT-CCTTCEEEEETTEESTTCCHHHHHHHHHTCCSSEE
T ss_pred EEEEEECCCCccCEEEecccCC---CCCEEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEE
Confidence 5677777889999999988654 2589999999999999999 99999999999999999999999999998888899
Q ss_pred EEEEecC
Q psy2533 173 LEIAKQG 179 (684)
Q Consensus 173 LvV~R~~ 179 (684)
|+|.|..
T Consensus 79 l~v~R~~ 85 (87)
T 2pa1_A 79 LQLDRIT 85 (87)
T ss_dssp EEEEECC
T ss_pred EEEEecC
Confidence 9999875
No 55
>2dmz_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.39 E-value=1.4e-12 Score=119.22 Aligned_cols=91 Identities=26% Similarity=0.436 Sum_probs=79.8
Q ss_pred CceEEEEEecCCCcccEEEEeccCCCC--CcccEEEEEecCCChhcccCccccCCeeeecCCeecCCCCHHHHHHHHHcC
Q psy2533 90 SMKSHSVRDMLRQEAKLSEMSEEGAGQ--DRLGIYIKSVVKGGAADANGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRT 167 (684)
Q Consensus 90 ~~~~V~v~k~~~~GLGfsI~GG~~~~~--~~~gIfIs~V~pGGpA~r~GrLqvGDrILaVNG~sl~g~sh~eAV~lLk~s 167 (684)
....|.+.+....+|||+|.++.+... ...+++|..|.++|||+++|+|++||+|++|||.++.++++.+++.+|+..
T Consensus 15 ~~~~v~l~~~~~~~lG~~i~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~l~~~ 94 (129)
T 2dmz_A 15 ETYNVELVRKDGQSLGIRIVGYVGTSHTGEASGIYVKSVIPGSAAYHNGHIQVNDKIVAVDGVNIQGFANHDVVEVLRNA 94 (129)
T ss_dssp EEEEEEECCCTTCCCCEEEEEECCCSSSCCCCEEEEEEECTTSHHHHHTCCCSSCBEEEETTBCCTTCCHHHHHHHHHHC
T ss_pred cEEEEEEEeCCCCCcCEEEEeecCCcccCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 445566667788999999999866543 346899999999999999999999999999999999999999999999998
Q ss_pred CCEEEEEEEecCc
Q psy2533 168 GPIVTLEIAKQGA 180 (684)
Q Consensus 168 g~~V~LvV~R~~~ 180 (684)
+..|.|+|.|...
T Consensus 95 ~~~v~l~v~R~~~ 107 (129)
T 2dmz_A 95 GQVVHLTLVRRKT 107 (129)
T ss_dssp CSSEEEEEEEESS
T ss_pred CCeEEEEEEeCCc
Confidence 8899999999764
No 56
>1ufx_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.39 E-value=1.1e-12 Score=116.51 Aligned_cols=86 Identities=17% Similarity=0.237 Sum_probs=74.2
Q ss_pred ceEEEEEecCCCcccEEEEeccCCCCCcccEEEEEecCCChhcccCccccCCeeeecCCeecCCCCHHHHHHHHHc----
Q psy2533 91 MKSHSVRDMLRQEAKLSEMSEEGAGQDRLGIYIKSVVKGGAADANGRLQAGDQLLKVDGQSLVGITQEKAAEYLVR---- 166 (684)
Q Consensus 91 ~~~V~v~k~~~~GLGfsI~GG~~~~~~~~gIfIs~V~pGGpA~r~GrLqvGDrILaVNG~sl~g~sh~eAV~lLk~---- 166 (684)
.+.|.+ ++...+|||+|.||.+.. .+.+||..|.+++||+++|+|++||+|++|||+++.+++|.+|+.+|+.
T Consensus 7 ~~~v~l-~k~~~glG~~i~gg~~~~--~~~~~I~~v~~~s~A~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~ 83 (103)
T 1ufx_A 7 GTLVRV-KKSAATLGIAIEGGANTR--QPLPRIVTIQRGGSAHNCGQLKVGHVILEVNGLTLRGKEHREAARIIAEAFKT 83 (103)
T ss_dssp SEEEEE-ECCSSSCCEEEECBTTSS--CSSCEEEEECTTSHHHHHCSSCTTCBCCEETTEECTTCBHHHHHHHHHHHHHC
T ss_pred eEEEEE-EcCCCcCCeEEECCCCCC--CCcEEEEEeCCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHHhccc
Confidence 455666 567789999999987654 2345999999999999999999999999999999999999999999997
Q ss_pred -CCCEEEEEEEecC
Q psy2533 167 -TGPIVTLEIAKQG 179 (684)
Q Consensus 167 -sg~~V~LvV~R~~ 179 (684)
.+..+.|+|.|..
T Consensus 84 ~~~~~i~l~v~r~~ 97 (103)
T 1ufx_A 84 KDRDYIDFLVTEFN 97 (103)
T ss_dssp SSCSEEEEEECCCC
T ss_pred CCCCeEEEEEEEcc
Confidence 4778999998865
No 57
>1wha_A KIAA0147 protein, scribble; PDZ domain, cellular signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.39 E-value=1.1e-12 Score=115.74 Aligned_cols=87 Identities=22% Similarity=0.448 Sum_probs=75.1
Q ss_pred eEEEEEecCCCcccEEEEeccCCC---CCcccEEEEEecCCChhcccCccccCCeeeecCCeecCCCCHHHHHHHHHcCC
Q psy2533 92 KSHSVRDMLRQEAKLSEMSEEGAG---QDRLGIYIKSVVKGGAADANGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTG 168 (684)
Q Consensus 92 ~~V~v~k~~~~GLGfsI~GG~~~~---~~~~gIfIs~V~pGGpA~r~GrLqvGDrILaVNG~sl~g~sh~eAV~lLk~sg 168 (684)
.+|.+ .+...+|||+|.+|.+.. ....+++|..|.++|||+++|+|++||+|++|||.++.++++.+++.+|+..+
T Consensus 9 ~~v~l-~~~~~glG~~l~~g~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~l~~~g 87 (105)
T 1wha_A 9 HVACL-ARSERGLGFSIAGGKGSTPYRAGDAGIFVSRIAEGGAAHRAGTLQVGDRVLSINGVDVTEARHDHAVSLLTAAS 87 (105)
T ss_dssp EEEEE-CCCTTCCSCEEECCTTSCCSSTTCCSCEEEECCTTSSHHHHSSCCTTCEEEEESSCBCTTCCHHHHHHHHTSCC
T ss_pred EEEEE-EeCCCccCEEEEeccCCCcccCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 34444 445678999999987632 23468999999999999999999999999999999999999999999999888
Q ss_pred CEEEEEEEecC
Q psy2533 169 PIVTLEIAKQG 179 (684)
Q Consensus 169 ~~V~LvV~R~~ 179 (684)
..|.|+|.|..
T Consensus 88 ~~v~l~v~R~~ 98 (105)
T 1wha_A 88 PTIALLLEREA 98 (105)
T ss_dssp SCEEEEEEECC
T ss_pred CeEEEEEEECC
Confidence 89999999875
No 58
>1uew_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.38 E-value=2.9e-12 Score=114.85 Aligned_cols=91 Identities=21% Similarity=0.302 Sum_probs=79.1
Q ss_pred CCceEEEEEecCCCcccEEEEeccCCCCC-c---ccEEEEEecCCChhcc-cCccccCCeeeecCCeecCCCCHHHHHHH
Q psy2533 89 SSMKSHSVRDMLRQEAKLSEMSEEGAGQD-R---LGIYIKSVVKGGAADA-NGRLQAGDQLLKVDGQSLVGITQEKAAEY 163 (684)
Q Consensus 89 s~~~~V~v~k~~~~GLGfsI~GG~~~~~~-~---~gIfIs~V~pGGpA~r-~GrLqvGDrILaVNG~sl~g~sh~eAV~l 163 (684)
...+.|.+.+....+|||+|.++.+.... . .+++|..|.++|||++ +| |++||+|++|||.++.+++|.+++.+
T Consensus 9 ~~~~~v~l~~~~~~~lGf~l~~~~~~~~~g~~~~~~~~V~~V~~~spA~~~ag-L~~GD~I~~ing~~v~~~~~~~~~~~ 87 (114)
T 1uew_A 9 LQTSDVVIHRKENEGFGFVIISSLNRPESGSTITVPHKIGRIIDGSPADRCAK-LKVGDRILAVNGQSIINMPHADIVKL 87 (114)
T ss_dssp CCCEEEEEECCTTSCCCEEEECCCCSCCSSCCSCCSCEEEEECTTCTTGGGSS-CCTTCBEEEETTBCTTTSCHHHHHHH
T ss_pred ccceEEEEEECCCCCCCEEEEeecccCCCCcccccCeEEEEECCCChHHHhCC-CCCCCEEEEECCEECCCCCHHHHHHH
Confidence 45678888888889999999988654321 1 2689999999999999 77 99999999999999999999999999
Q ss_pred HHcCCCEEEEEEEecCc
Q psy2533 164 LVRTGPIVTLEIAKQGA 180 (684)
Q Consensus 164 Lk~sg~~V~LvV~R~~~ 180 (684)
|+..+..|.|+|.|...
T Consensus 88 l~~~g~~v~l~v~r~~~ 104 (114)
T 1uew_A 88 IKDAGLSVTLRIIPQEE 104 (114)
T ss_dssp HHHTTTEEEEEECCCSC
T ss_pred HHcCCCeEEEEEEeCCc
Confidence 99989999999988764
No 59
>2g5m_B Neurabin-2; spinophilin, PDZ domain, CNS, synaptic transmission, protein binding; NMR {Rattus norvegicus}
Probab=99.38 E-value=8.8e-13 Score=117.74 Aligned_cols=88 Identities=35% Similarity=0.509 Sum_probs=75.6
Q ss_pred EEEEEecCCCcccEEEEe---ccCCCCCcccEEEEEecCCChhcccCccccCCeeeecCCeecCCCCHHHHHHHHHcCCC
Q psy2533 93 SHSVRDMLRQEAKLSEMS---EEGAGQDRLGIYIKSVVKGGAADANGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGP 169 (684)
Q Consensus 93 ~V~v~k~~~~GLGfsI~G---G~~~~~~~~gIfIs~V~pGGpA~r~GrLqvGDrILaVNG~sl~g~sh~eAV~lLk~sg~ 169 (684)
.|.+. +...+|||+|.+ |.+......|++|..|.++|||+++|+|++||+|++|||.++.++++.+++.+++..+.
T Consensus 7 ~v~l~-k~~~glG~~l~~~~~~~~~~~~~~g~~V~~V~~~s~A~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~g~ 85 (113)
T 2g5m_B 7 PVELE-KDSEGLGISIIGMGAGADMGLEKLGIFVKTVTEGGAAHRDGRIQVNDLLVEVDGTSLVGVTQSFAASVLRNTKG 85 (113)
T ss_dssp EEECC-CCSSCCCCEEEEEECCCCSSSCCEEEEEEECCTTSHHHHHTCSCTTCBEEEETTEECSSCCHHHHHHHHHHSCS
T ss_pred EEEEE-eCCCCCCEEEEecCCCCcCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHhcCCC
Confidence 34443 356899999998 44433345699999999999999999999999999999999999999999999999999
Q ss_pred EEEEEEEecCcc
Q psy2533 170 IVTLEIAKQGAI 181 (684)
Q Consensus 170 ~V~LvV~R~~~~ 181 (684)
.|.|+|.|....
T Consensus 86 ~v~l~v~R~~~~ 97 (113)
T 2g5m_B 86 RVRFMIGRERPG 97 (113)
T ss_dssp SCEEEEEECCCC
T ss_pred eEEEEEEeCCCC
Confidence 999999998754
No 60
>2csj_A TJP2 protein; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.38 E-value=1.3e-12 Score=117.63 Aligned_cols=89 Identities=18% Similarity=0.294 Sum_probs=77.4
Q ss_pred CceEEEEEecCCCcccEEEEeccCCCC---CcccEEEEEecCCChhcccCccccCCeeeecCCeecCCCCHHHHHHHHHc
Q psy2533 90 SMKSHSVRDMLRQEAKLSEMSEEGAGQ---DRLGIYIKSVVKGGAADANGRLQAGDQLLKVDGQSLVGITQEKAAEYLVR 166 (684)
Q Consensus 90 ~~~~V~v~k~~~~GLGfsI~GG~~~~~---~~~gIfIs~V~pGGpA~r~GrLqvGDrILaVNG~sl~g~sh~eAV~lLk~ 166 (684)
....|.+.+..+.+|||+|.||.+... +..+++|..|.++|||+ .| |++||+|++|||.++.+++|.+++.+|+.
T Consensus 14 ~~~~v~l~k~~~~glG~~i~gg~~~~~~~~~~~gv~V~~V~~~spA~-~g-L~~GD~I~~Vng~~v~~~~~~~~~~~l~~ 91 (117)
T 2csj_A 14 EQYTVTLQKDSKRGFGIAVSGGRDNPHFENGETSIVISDVLPGGPAD-GL-LQENDRVVMVNGTPMEDVLHSFAVQQLRK 91 (117)
T ss_dssp EEEEEEEECCSSSTTCEEEECCSSCCCCSSCCCBCEEEEECTTSSHH-HH-BCTTCEEEEESSCBCBTCCHHHHHHHHHH
T ss_pred eEEEEEEEECCCCccCEEEeCCcCCccccCCCCCEEEEEECCCCccc-cc-CCCCCEEEEECCEECCCcCHHHHHHHHhc
Confidence 456677777777999999999876543 35689999999999996 55 99999999999999999999999999999
Q ss_pred CCCEEEEEEEecCc
Q psy2533 167 TGPIVTLEIAKQGA 180 (684)
Q Consensus 167 sg~~V~LvV~R~~~ 180 (684)
.+..|.|+|.|...
T Consensus 92 ~~~~v~l~v~R~~~ 105 (117)
T 2csj_A 92 SGKIAAIVVKRPRK 105 (117)
T ss_dssp SCSEEEEEEEEEEE
T ss_pred CCCeEEEEEEECCc
Confidence 99999999999754
No 61
>3nfk_A Tyrosine-protein phosphatase non-receptor type 4; PDZ-PDZ-binding site complex, protein binding; 1.43A {Homo sapiens} SCOP: b.36.1.1 PDB: 3nfl_A 2vph_A
Probab=99.38 E-value=9.4e-13 Score=116.28 Aligned_cols=87 Identities=14% Similarity=0.210 Sum_probs=76.7
Q ss_pred CCceEEEEEecCCCcccEEEEeccCCCCCcccEEEEEecCCChhcccC-ccccCCeeeecCCeecCCCCHHHHHHHHHcC
Q psy2533 89 SSMKSHSVRDMLRQEAKLSEMSEEGAGQDRLGIYIKSVVKGGAADANG-RLQAGDQLLKVDGQSLVGITQEKAAEYLVRT 167 (684)
Q Consensus 89 s~~~~V~v~k~~~~GLGfsI~GG~~~~~~~~gIfIs~V~pGGpA~r~G-rLqvGDrILaVNG~sl~g~sh~eAV~lLk~s 167 (684)
...+.+.+.+....+|||.+.||.+.. .+++|..|.++|||+++| +|++||+|++|||.++.+++|.+++.+|+..
T Consensus 16 ~~~~~v~l~~~~~~~~G~~~~gg~~~~---~~~~V~~V~~~spA~~aG~rL~~GD~Il~ing~~v~~~~~~~~~~~i~~~ 92 (107)
T 3nfk_A 16 DNLVLIRMKPDENGRFGFNVKGGYDQK---MPVIVSRVAPGTPADLCVPRLNEGDQVVLINGRDIAEHTHDQVVLFIKAS 92 (107)
T ss_dssp CCCEEEEECCCTTSCCCEEEEEEGGGT---EEEEEEEECTTSHHHHSSSCCCTTCEEEEETTEECTTCCHHHHHHHHHCG
T ss_pred CCEEEEEEEcCCCCCCCEEEEccCCCC---CCeEEEEECCCCchHHcCCccCCCCEEEEECCEECCCCCHHHHHHHHHhc
Confidence 457778887777789999999986532 479999999999999999 6999999999999999999999999999988
Q ss_pred CC----EEEEEEEec
Q psy2533 168 GP----IVTLEIAKQ 178 (684)
Q Consensus 168 g~----~V~LvV~R~ 178 (684)
+. .|.|+|.|.
T Consensus 93 ~~~~~~~v~l~v~r~ 107 (107)
T 3nfk_A 93 CERHSGELMLLVRPN 107 (107)
T ss_dssp GGSBTTBEEEEEECC
T ss_pred cccCCcEEEEEEEcC
Confidence 65 899999763
No 62
>2cs5_A Tyrosine-protein phosphatase, non-receptor type 4; PDZ domain, ptpase, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.38 E-value=1.3e-12 Score=117.87 Aligned_cols=89 Identities=13% Similarity=0.210 Sum_probs=77.3
Q ss_pred CCceEEEEEecCCCcccEEEEeccCCCCCcccEEEEEecCCChhccc-CccccCCeeeecCCeecCCCCHHHHHHHHHcC
Q psy2533 89 SSMKSHSVRDMLRQEAKLSEMSEEGAGQDRLGIYIKSVVKGGAADAN-GRLQAGDQLLKVDGQSLVGITQEKAAEYLVRT 167 (684)
Q Consensus 89 s~~~~V~v~k~~~~GLGfsI~GG~~~~~~~~gIfIs~V~pGGpA~r~-GrLqvGDrILaVNG~sl~g~sh~eAV~lLk~s 167 (684)
...++|.+.+...++|||+|.+|.+.. .+++|..|.++|||+++ |.|++||+|++|||.++.+++|.+++.+++..
T Consensus 14 ~~~~~v~l~k~~~~~~G~~l~gg~~~~---~~v~V~~V~~~spA~~a~gGL~~GD~Il~ing~~v~~~~~~~~~~~~~~~ 90 (119)
T 2cs5_A 14 DNLVLIRMKPDENGRFGFNVKGGYDQK---MPVIVSRVAPGTPADLCVPRLNEGDQVVLINGRDIAEHTHDQVVLFIKAS 90 (119)
T ss_dssp SCCEEEEECCCSSSCCSEEEEEEGGGT---EEEEEEEECSSSTTTSSSSCCCTTCEEEEETTBCTTSSCHHHHHHHHHHH
T ss_pred CCeEEEEEEeCCCCCcCEEEecccCCC---CCeEEEEECCCCHHHHhhcCCCCCCEEEEECCEECCCCCHHHHHHHHHhc
Confidence 456778888877888999999986542 47999999999999999 34999999999999999999999999999987
Q ss_pred C----CEEEEEEEecCc
Q psy2533 168 G----PIVTLEIAKQGA 180 (684)
Q Consensus 168 g----~~V~LvV~R~~~ 180 (684)
+ ..|.|+|.|...
T Consensus 91 ~~~~~~~v~l~v~R~~~ 107 (119)
T 2cs5_A 91 CERHSGELMLLVRPNAV 107 (119)
T ss_dssp HHCCSSCEEEEEECCCC
T ss_pred cccCCCEEEEEEEcccc
Confidence 4 489999988753
No 63
>3rle_A Golgi reassembly-stacking protein 2; PDZ, tether, golgin, membrane protein; 1.65A {Homo sapiens} PDB: 4edj_A
Probab=99.38 E-value=3.7e-12 Score=126.03 Aligned_cols=164 Identities=12% Similarity=0.066 Sum_probs=103.1
Q ss_pred cccEEEEeccCCCCCcccEEEEEecCCChhcccCccccC-CeeeecCCeecCCCCHHHHHHHHHcCCCEEEEEEEecCcc
Q psy2533 103 EAKLSEMSEEGAGQDRLGIYIKSVVKGGAADANGRLQAG-DQLLKVDGQSLVGITQEKAAEYLVRTGPIVTLEIAKQGAI 181 (684)
Q Consensus 103 GLGfsI~GG~~~~~~~~gIfIs~V~pGGpA~r~GrLqvG-DrILaVNG~sl~g~sh~eAV~lLk~sg~~V~LvV~R~~~~ 181 (684)
|+|++...+.+ ...|++|..|.++|||+++| |++| |+|++|||..+.+..+....-+....+..|.|+|.|....
T Consensus 3 g~~~~~~~~~~---~~~G~~V~~V~~~SpA~~AG-L~~G~D~I~~ing~~v~~~~~~~~~~~~~~~g~~v~l~v~R~~~~ 78 (209)
T 3rle_A 3 GSSQSVEIPGG---GTEGYHVLRVQENSPGHRAG-LEPFFDFIVSINGSRLNKDNDTLKDLLKANVEKPVKMLIYSSKTL 78 (209)
T ss_dssp -----CCCTTS---SSEEEEEEEECTTSHHHHTT-CCTTTEEEEEETTEECCSSSSHHHHHHHHTTTSCEEEEEEETTTC
T ss_pred chhhhhhccCC---CCCEEEEEEECCCCHHHHCC-CCcCCeEEEEECCEECcCHHHHHHHHHhcCCCCEEEEEEEecCCc
Confidence 44555543332 23589999999999999999 9999 9999999999998876544333334578899999986532
Q ss_pred ccccccccCCCCCccccCCCccccccccccccccccccccccCCCCCCCCCCCCCCCCCCcccccccccccCCCCCCCCC
Q psy2533 182 YHGLATLLSQPSPVMTRGQVKTYESTISVQQRKERSSQNLHDMNNGVGGSHHPAPGPGSGMNHHPVVSRQASTPSLPQAS 261 (684)
Q Consensus 182 ~~~~stl~s~psP~~~s~~~~~ses~ls~~~~~~~~sv~L~k~s~GlGfSi~~~~g~G~Gi~ikpIv~~~~~t~slp~~s 261 (684)
.....++ .| ... ......+|+. +..+....
T Consensus 79 ~~~~v~l--~p--~~~------------------------~~~~~~lGi~------------~~~~~~~~---------- 108 (209)
T 3rle_A 79 ELRETSV--TP--SNL------------------------WGGQGLLGVS------------IRFCSFDG---------- 108 (209)
T ss_dssp CEEEEEE--CC--CSS------------------------SSSSSSSCEE------------EEEEECTT----------
T ss_pred eEEEEEE--cc--ccc------------------------ccccCccceE------------EeecChhH----------
Confidence 2111111 00 000 0001112222 22111000
Q ss_pred CCCCCCCCCCCCCcEEEecc--hhhhhcCCCCC-CCEEEEECCEecCCCCHHHHHHHHHhC-CCeEEEEEEeCCc
Q psy2533 262 PYPAPAPAPADPERFYQNLS--VYRNQNGRLQA-GDQLLKVDGQSLVGITQEKAAEYLVRT-GPIVTLEIAKQGA 332 (684)
Q Consensus 262 l~~gs~~~~~d~GIFV~sI~--GaAardGrLr~-GDqIL~VNG~sl~g~Th~eAv~lLk~s-g~~VtL~V~R~~~ 332 (684)
....|++|..|. ++|++.| |++ ||+|++|||. +.+. .+...+|+.. +..|.|.|.|.+.
T Consensus 109 --------~~~~Gv~V~~V~~~spA~~aG-l~~~GD~I~~ing~-v~~~--~~l~~~l~~~~g~~v~l~v~r~~~ 171 (209)
T 3rle_A 109 --------ANENVWHVLEVESNSPAALAG-LRPHSDYIIGADTV-MNES--EDLFSLIETHEAKPLKLYVYNTDT 171 (209)
T ss_dssp --------GGGSCEEEEEECTTSHHHHHT-CCTTTEEEEEESSC-CCSS--SCHHHHHHHTTTSCEEEEEEETTT
T ss_pred --------ccccceEEEEeCCCChHHHCC-CCCCCCEEEECCCE-eCCH--HHHHHHHHhCCCCeEEEEEEECCc
Confidence 012578999987 6777776 999 9999999997 6554 4566666664 7789999999754
No 64
>3i4w_A Disks large homolog 4; alpha and beta protein, alternative splicing, cell junction, cell membrane, lipoprotein, membrane, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.36.1.1 PDB: 3k82_A* 3jxt_A* 2he2_A 1pdr_A 2i0i_A
Probab=99.38 E-value=2.8e-12 Score=112.28 Aligned_cols=88 Identities=27% Similarity=0.379 Sum_probs=77.2
Q ss_pred CCceEEEEEecCCCcccEEEEeccCCCCCcccEEEEEecCCChhcccCccccCCeeeecCCeecCCCCHHHHHHHHHcCC
Q psy2533 89 SSMKSHSVRDMLRQEAKLSEMSEEGAGQDRLGIYIKSVVKGGAADANGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTG 168 (684)
Q Consensus 89 s~~~~V~v~k~~~~GLGfsI~GG~~~~~~~~gIfIs~V~pGGpA~r~GrLqvGDrILaVNG~sl~g~sh~eAV~lLk~sg 168 (684)
...+.|.+.+. ..+|||++.++.+. .+++|..|.++|||+++|+|++||+|++|||.++.++++.+++.+++..+
T Consensus 10 ~~~~~v~l~k~-~~glG~~~~~~~~~----~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~~ 84 (104)
T 3i4w_A 10 REPRRIVIHRG-STGLGFNIVGGEXG----EGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAG 84 (104)
T ss_dssp SSCEEEEEECB-TTBTSEEEEECC-C----CCEEEEEECTTSHHHHHCCCCTTEEEEEETTEECTTCCHHHHHHHHHTSC
T ss_pred CccEEEEEEeC-CCccCEEEECCCCC----CCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 45667777765 67899999987542 48999999999999999999999999999999999999999999999999
Q ss_pred CEEEEEEEecCcc
Q psy2533 169 PIVTLEIAKQGAI 181 (684)
Q Consensus 169 ~~V~LvV~R~~~~ 181 (684)
..+.|+|.|....
T Consensus 85 ~~v~l~v~r~~~~ 97 (104)
T 3i4w_A 85 QTVTIIAQYKPEE 97 (104)
T ss_dssp SEEEEEEEECHHH
T ss_pred CeEEEEEEECcch
Confidence 9999999987543
No 65
>2yt7_A Amyloid beta A4 precursor protein-binding family A member 3; neuron-specific X11L2 protein, neuronal MUNC18-1-interacting protein 3, MINT-3; NMR {Homo sapiens}
Probab=99.37 E-value=3.8e-12 Score=111.89 Aligned_cols=91 Identities=21% Similarity=0.293 Sum_probs=76.8
Q ss_pred CCceEEEEEecCCCcccEEEEeccCCCCCcccEEEEEecCCChhcccCccccCCeeeecCCeecCCCCHHHHHHHHHc--
Q psy2533 89 SSMKSHSVRDMLRQEAKLSEMSEEGAGQDRLGIYIKSVVKGGAADANGRLQAGDQLLKVDGQSLVGITQEKAAEYLVR-- 166 (684)
Q Consensus 89 s~~~~V~v~k~~~~GLGfsI~GG~~~~~~~~gIfIs~V~pGGpA~r~GrLqvGDrILaVNG~sl~g~sh~eAV~lLk~-- 166 (684)
...+.|.+.+..+.+|||+|.+... .....+++|..|.++|||+++|.|++||+|++|||.++.++++.+++.+|+.
T Consensus 8 ~~~~~v~l~k~~g~~lG~~i~~~~~-~~~~~~~~V~~V~~~spA~~~ggl~~GD~I~~Ing~~v~~~~~~~~~~~l~~~~ 86 (101)
T 2yt7_A 8 DNCREVHLEKRRGEGLGVALVESGW-GSLLPTAVIANLLHGGPAERSGALSIGDRLTAINGTSLVGLPLAACQAAVRETK 86 (101)
T ss_dssp CCCEEEEEECCTTCCCCEEEEECCC-SSSSCCEEEEEECTTSTTGGGSSCCTTCEEEEESSCBCTTSCHHHHHHHHHHTT
T ss_pred CceEEEEEEeCCCCccCEEEEeCCC-CCCccCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC
Confidence 3567788888787899999985322 1223479999999999999977799999999999999999999999999998
Q ss_pred CCCEEEEEEEecCc
Q psy2533 167 TGPIVTLEIAKQGA 180 (684)
Q Consensus 167 sg~~V~LvV~R~~~ 180 (684)
.+..|.|+|.|.++
T Consensus 87 ~g~~v~l~v~R~~p 100 (101)
T 2yt7_A 87 SQTSVTLSIVHCPP 100 (101)
T ss_dssp TSSEEEEEECCCCC
T ss_pred CCCeEEEEEEeCCC
Confidence 68899999988754
No 66
>2dkr_A LIN-7 homolog B; LIN-7B, PDZ, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.37 E-value=1.9e-12 Score=111.22 Aligned_cols=87 Identities=32% Similarity=0.408 Sum_probs=75.9
Q ss_pred CCceEEEEEecCCCcccEEEEeccCCCCCcccEEEEEecCCChhcccCccccCCeeeecCCeecCCCCHHHHHHHHHcCC
Q psy2533 89 SSMKSHSVRDMLRQEAKLSEMSEEGAGQDRLGIYIKSVVKGGAADANGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTG 168 (684)
Q Consensus 89 s~~~~V~v~k~~~~GLGfsI~GG~~~~~~~~gIfIs~V~pGGpA~r~GrLqvGDrILaVNG~sl~g~sh~eAV~lLk~sg 168 (684)
...++|.+.+ ...+|||+|.+|.+.. .+++|..|.++|||+++|.|++||+|++|||.++.++++.+++.+++..+
T Consensus 4 ~~~r~v~l~k-~~~glG~~l~~~~~~~---~~~~V~~V~~~spA~~aGgl~~GD~I~~vng~~v~~~~~~~~~~~~~~~~ 79 (93)
T 2dkr_A 4 GSSGVVELPK-TDEGLGFNIMGGKEQN---SPIYISRVIPGGVADRHGGLKRGDQLLSVNGVSVEGEQHEKAVELLKAAQ 79 (93)
T ss_dssp SCSCEEEEEC-CTTCCCEEEECSSSSS---CCCEEEEECTTSHHHHHCCCCTTCBEEEETTEECTTSCHHHHHHHHHHCC
T ss_pred CCCEEEEEEe-CCCCccEEEecccCCC---CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC
Confidence 4567788876 4689999999875532 47999999999999999669999999999999999999999999999888
Q ss_pred CEEEEEEEecC
Q psy2533 169 PIVTLEIAKQG 179 (684)
Q Consensus 169 ~~V~LvV~R~~ 179 (684)
..|.|+|.|.+
T Consensus 80 ~~v~l~v~r~~ 90 (93)
T 2dkr_A 80 GSVKLVVRSGP 90 (93)
T ss_dssp SEEEEEECCCC
T ss_pred CcEEEEEEeCC
Confidence 89999998764
No 67
>2jil_A GRIP1 protein, glutamate receptor interacting protein-1; endoplasmic reticulum, postsynaptic membrane, membrane, MEMB protein; 1.5A {Homo sapiens}
Probab=99.37 E-value=2.6e-12 Score=111.38 Aligned_cols=87 Identities=26% Similarity=0.338 Sum_probs=75.0
Q ss_pred EEEEEecCCCcccEEEEeccCCC-CCcccEEEEEecCCChhcccCccccCCeeeecCCeecCCCCHHHHHHHHHcCCCEE
Q psy2533 93 SHSVRDMLRQEAKLSEMSEEGAG-QDRLGIYIKSVVKGGAADANGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGPIV 171 (684)
Q Consensus 93 ~V~v~k~~~~GLGfsI~GG~~~~-~~~~gIfIs~V~pGGpA~r~GrLqvGDrILaVNG~sl~g~sh~eAV~lLk~sg~~V 171 (684)
+|.+. +...+|||+|.+|.+.. ....+++|..|.++|||+++|+|++||+|++|||.++.++++.+++.+|+..+..+
T Consensus 6 ~v~l~-k~~~~lG~~i~~~~~~~~~~~~~~~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v 84 (97)
T 2jil_A 6 EVTLH-KEGNTFGFVIRGGAHDDRNKSRPVVITSVRPGGPADREGTIKPGDRLLSVDGIRLLGTTHAEAMSILKQCGQEA 84 (97)
T ss_dssp EEEEE-CBTTBCSEEEEEECCSCC--CEEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHHHSCSEE
T ss_pred EEEEE-eCCCccCEEEeCcccCCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeE
Confidence 44454 45689999999986543 22458999999999999999999999999999999999999999999999988999
Q ss_pred EEEEEecCc
Q psy2533 172 TLEIAKQGA 180 (684)
Q Consensus 172 ~LvV~R~~~ 180 (684)
.|+|.|...
T Consensus 85 ~l~v~R~~~ 93 (97)
T 2jil_A 85 ALLIEYDVS 93 (97)
T ss_dssp EEEEEEECC
T ss_pred EEEEEeCCC
Confidence 999999764
No 68
>2ego_A General receptor for phosphoinositides 1- associated scaffold protein; PDZ domain, ligand-free, protein binding; 1.80A {Rattus norvegicus} PDB: 2egn_A 2egk_A 2pnt_A
Probab=99.37 E-value=2.8e-12 Score=111.43 Aligned_cols=88 Identities=17% Similarity=0.245 Sum_probs=74.9
Q ss_pred CceEEEEEecCCCcccEEEEe-ccCC---CCCcccEEEEEecCCChhcccCccccCCeeeecCCeecCCCCHHHHHHHHH
Q psy2533 90 SMKSHSVRDMLRQEAKLSEMS-EEGA---GQDRLGIYIKSVVKGGAADANGRLQAGDQLLKVDGQSLVGITQEKAAEYLV 165 (684)
Q Consensus 90 ~~~~V~v~k~~~~GLGfsI~G-G~~~---~~~~~gIfIs~V~pGGpA~r~GrLqvGDrILaVNG~sl~g~sh~eAV~lLk 165 (684)
..++|.+.|.+..+|||+|.+ |... .....+++|..|.++|||+++| |++||+|++|||.++.++++.+++.+|+
T Consensus 4 ~~r~v~l~k~~~~~~Gf~l~~~g~~~~~~~~~~~~~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l~ 82 (96)
T 2ego_A 4 QRKVLTLEKGDNQTFGFEIQTYGLHHREEQRVEMVTFVARVHESSPAQLAG-LTPGDTIASVNGLNVEGIRHREIVDIIK 82 (96)
T ss_dssp CEEEEEEECCTTCCCSEEEEEEEC-------CCEEEEEEEECTTCHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHHH
T ss_pred ccEEEEEEeCCCCCccEEEEeccccccCCCCCCCCeEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 457888988888899999997 2111 1113589999999999999999 9999999999999999999999999999
Q ss_pred cCCCEEEEEEEec
Q psy2533 166 RTGPIVTLEIAKQ 178 (684)
Q Consensus 166 ~sg~~V~LvV~R~ 178 (684)
..++.|.|+|.+.
T Consensus 83 ~~~~~v~l~v~~~ 95 (96)
T 2ego_A 83 ASGNVLRLETLYG 95 (96)
T ss_dssp HTTTEEEEEEECC
T ss_pred hCCCeEEEEEEEC
Confidence 9888999998763
No 69
>2kpk_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; PDZ domain, ATP-binding, cell junction, cell membrane; NMR {Homo sapiens} PDB: 2kpl_A
Probab=99.36 E-value=4.5e-12 Score=116.42 Aligned_cols=90 Identities=19% Similarity=0.338 Sum_probs=77.0
Q ss_pred CCCceEEEEEecCCCcccEEEEeccCCCCCcccEEEEEecCCChhcccCccccCCeeeecCCeecCCCCHHHHHHHHHcC
Q psy2533 88 DSSMKSHSVRDMLRQEAKLSEMSEEGAGQDRLGIYIKSVVKGGAADANGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRT 167 (684)
Q Consensus 88 ~s~~~~V~v~k~~~~GLGfsI~GG~~~~~~~~gIfIs~V~pGGpA~r~GrLqvGDrILaVNG~sl~g~sh~eAV~lLk~s 167 (684)
......|.+.+ ...+|||+|.||.+. ..+++|..|.++|||+++|+|++||+|++|||.++.+++|.+++.+|+..
T Consensus 16 ~g~~~~v~l~~-~~~g~G~~i~g~~~~---~~~v~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~l~~~ 91 (129)
T 2kpk_A 16 KGKFIHTKLRK-SSRGFGFTVVGGDEP---DEFLQIKSLVLDGPAALDGKMETGDVIVSVNDTCVLGHTHAQVVKIFQSI 91 (129)
T ss_dssp CSEEEEEEEEE-CSSCCSEEEEEEEET---TEEEEEEEECTTSHHHHHSSCCTTCEEEEETTEECTTSCHHHHHHHHHHS
T ss_pred CCcEEEEEEEE-CCCcccEEEeCccCC---CCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence 34455566665 567999999987542 35799999999999999999999999999999999999999999999987
Q ss_pred --CCEEEEEEEecCcc
Q psy2533 168 --GPIVTLEIAKQGAI 181 (684)
Q Consensus 168 --g~~V~LvV~R~~~~ 181 (684)
+..|.|+|.|....
T Consensus 92 ~~g~~v~l~v~R~~~~ 107 (129)
T 2kpk_A 92 PIGASVDLELCRGYPL 107 (129)
T ss_dssp CTTEEEEEEEEECSCC
T ss_pred CCCCeEEEEEEeCCCC
Confidence 67899999998653
No 70
>2daz_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.36 E-value=2.5e-12 Score=117.08 Aligned_cols=90 Identities=21% Similarity=0.377 Sum_probs=78.4
Q ss_pred CCceEEEEEecCCCcccEEEEeccCCCCCcccEEEEEecCCChhcccCccccCCeeeecCCeecCCCCHHHHHHHHHcCC
Q psy2533 89 SSMKSHSVRDMLRQEAKLSEMSEEGAGQDRLGIYIKSVVKGGAADANGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTG 168 (684)
Q Consensus 89 s~~~~V~v~k~~~~GLGfsI~GG~~~~~~~~gIfIs~V~pGGpA~r~GrLqvGDrILaVNG~sl~g~sh~eAV~lLk~sg 168 (684)
.....|.+.+. ..+|||+|.++.+.. ..+++|..|.++|||+++|+|++||+|++|||.++.++++.+++.+++..+
T Consensus 24 ~~~~~v~l~k~-~~glG~~l~~~~~~~--~~gv~V~~V~~~spA~~aG~L~~GD~Il~Ing~~v~~~~~~~~~~~~~~~~ 100 (124)
T 2daz_A 24 GELHIIELEKD-KNGLGLSLAGNKDRS--RMSIFVVGINPEGPAAADGRMRIGDELLEINNQILYGRSHQNASAIIKTAP 100 (124)
T ss_dssp SEEEEEEEECC-SSCCCEEEECBSSTT--SCCEEEEEECTTSHHHHHTCCCTTCEECEESSCBCTTSCHHHHHHHHHHSC
T ss_pred CceEEEEEEeC-CCccCEEEeccCCCC--cCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 34556666654 679999999886543 358999999999999999999999999999999999999999999999998
Q ss_pred CEEEEEEEecCcc
Q psy2533 169 PIVTLEIAKQGAI 181 (684)
Q Consensus 169 ~~V~LvV~R~~~~ 181 (684)
..|.|+|.|....
T Consensus 101 ~~v~l~v~R~~~~ 113 (124)
T 2daz_A 101 SKVKLVFIRNEDA 113 (124)
T ss_dssp SEEEEEEEECTTH
T ss_pred CeEEEEEEeCCCc
Confidence 9999999998654
No 71
>1m5z_A GRIP, AMPA receptor interacting protein; six beta-strands and two alpha-helices, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1
Probab=99.36 E-value=3.8e-12 Score=109.06 Aligned_cols=85 Identities=18% Similarity=0.253 Sum_probs=74.4
Q ss_pred CCceEEEEEecCC-CcccEEEEeccCCCCCcccEEEEEecCCChhcccCccccCCeeeecCCeecCCCCHHHHHHHHHcC
Q psy2533 89 SSMKSHSVRDMLR-QEAKLSEMSEEGAGQDRLGIYIKSVVKGGAADANGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRT 167 (684)
Q Consensus 89 s~~~~V~v~k~~~-~GLGfsI~GG~~~~~~~~gIfIs~V~pGGpA~r~GrLqvGDrILaVNG~sl~g~sh~eAV~lLk~s 167 (684)
.....|.+.+... .+|||+|.++.+. .+++|..|.++|||+++| |++||+|++|||.++.++++.+++.+++..
T Consensus 5 ~~~~~v~l~k~~~~~~~G~~~~~~~~~----~gv~V~~V~~~spA~~aG-l~~GD~I~~vng~~v~~~~~~~~~~~~~~~ 79 (91)
T 1m5z_A 5 VELHKVTLYKDSGMEDFGFSVADGLLE----KGVYVKNIRPAGPGDLGG-LKPYDRLLQVNHVRTRDFDCCLVVPLIAES 79 (91)
T ss_dssp CEEEEEEEECCTTCSSSSEEEEECTTS----SCEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHTS
T ss_pred cceEEEEEEECCCCCCccEEEEeccCC----CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 3456677777655 6899999987542 489999999999999999 999999999999999999999999999988
Q ss_pred CCEEEEEEEec
Q psy2533 168 GPIVTLEIAKQ 178 (684)
Q Consensus 168 g~~V~LvV~R~ 178 (684)
+..|.|+|.|.
T Consensus 80 g~~v~l~v~R~ 90 (91)
T 1m5z_A 80 GNKLDLVISRN 90 (91)
T ss_dssp TTEEEEEEEEC
T ss_pred CCEEEEEEEeC
Confidence 99999999875
No 72
>1ueq_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.36 E-value=6.5e-12 Score=114.32 Aligned_cols=89 Identities=16% Similarity=0.316 Sum_probs=76.0
Q ss_pred CCceEEEEEecCCCcccEEEEeccCCCCCcccEEEEEecCCChhcccCccccCCeeeecCCeecCCCCHHHHHHHHHc--
Q psy2533 89 SSMKSHSVRDMLRQEAKLSEMSEEGAGQDRLGIYIKSVVKGGAADANGRLQAGDQLLKVDGQSLVGITQEKAAEYLVR-- 166 (684)
Q Consensus 89 s~~~~V~v~k~~~~GLGfsI~GG~~~~~~~~gIfIs~V~pGGpA~r~GrLqvGDrILaVNG~sl~g~sh~eAV~lLk~-- 166 (684)
....+|.+.+ ...+|||+|.+|.+. ..+++|..|.++|||+++|+|++||+|++|||.++.++++.+++.+|+.
T Consensus 18 ~~~~~v~l~~-~~~glG~~~~~g~~~---~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~ 93 (123)
T 1ueq_A 18 GTFLSTTLKK-SNMGFGFTIIGGDEP---DEFLQVKSVIPDGPAAQDGKMETGDVIVYINEVCVLGHTHADVVKLFQSVP 93 (123)
T ss_dssp SEEEEEEEEC-CTTSCSEEEECCSSS---SCCCEEEEECTTSHHHHTSCCCTTCEEEEETTEECTTSCHHHHHHHHHTSC
T ss_pred CcEEEEEEEe-CCCceeEEEecccCC---CCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC
Confidence 3444555554 577999999987553 3479999999999999999999999999999999999999999999998
Q ss_pred CCCEEEEEEEecCcc
Q psy2533 167 TGPIVTLEIAKQGAI 181 (684)
Q Consensus 167 sg~~V~LvV~R~~~~ 181 (684)
.+..|.|+|.|....
T Consensus 94 ~g~~v~l~v~R~~~~ 108 (123)
T 1ueq_A 94 IGQSVNLVLCRGYPL 108 (123)
T ss_dssp TTCEEEEEEEESCCC
T ss_pred CCCeEEEEEEeCCCC
Confidence 468999999998754
No 73
>1g9o_A NHE-RF; PDZ domain, complex, signaling protein; 1.50A {Homo sapiens} SCOP: b.36.1.1 PDB: 1i92_A 1gq4_A 1gq5_A 2ocs_A
Probab=99.36 E-value=4.6e-12 Score=108.53 Aligned_cols=83 Identities=24% Similarity=0.334 Sum_probs=71.8
Q ss_pred ceEEEEEecCCCcccEEEEeccCCCCCcccEEEEEecCCChhcccCccccCCeeeecCCeecCCCCHHHHHHHHHcCCCE
Q psy2533 91 MKSHSVRDMLRQEAKLSEMSEEGAGQDRLGIYIKSVVKGGAADANGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGPI 170 (684)
Q Consensus 91 ~~~V~v~k~~~~GLGfsI~GG~~~~~~~~gIfIs~V~pGGpA~r~GrLqvGDrILaVNG~sl~g~sh~eAV~lLk~sg~~ 170 (684)
.++|.+.+.. .||||++.++.+. .+++|..|.++|||+++| |++||+|++|||.++.++++.+++.+|+..++.
T Consensus 4 ~r~v~l~r~~-~g~G~~~~~~~~~----~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~ 77 (91)
T 1g9o_A 4 PRLCCLEKGP-NGYGFHLHGEKGK----LGQYIRLVEPGSPAEKAG-LLAGDRLVEVNGENVEKETHQQVVSRIRAALNA 77 (91)
T ss_dssp CEEEEEECBT-TBCCEEEEECTTC----SSEEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHHHTCSSE
T ss_pred cEEEEEEeCC-CcccEEEEecCCC----CCEEEEEECCCCHHHHCC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCc
Confidence 5677777654 5899999987542 489999999999999999 999999999999999999999999999998787
Q ss_pred EEEEEEecC
Q psy2533 171 VTLEIAKQG 179 (684)
Q Consensus 171 V~LvV~R~~ 179 (684)
+.+++.++.
T Consensus 78 ~~~~~~~r~ 86 (91)
T 1g9o_A 78 VRLLVVDPE 86 (91)
T ss_dssp EEEEEECCC
T ss_pred EEEEEEcCC
Confidence 777776653
No 74
>1z87_A Alpha-1-syntrophin; protein binding; NMR {Mus musculus}
Probab=99.36 E-value=1.6e-12 Score=134.18 Aligned_cols=95 Identities=28% Similarity=0.353 Sum_probs=83.9
Q ss_pred CCCCCCCceEEEEEecCCCcccEEEEeccCCCCCcccEEEEEecCCChhcccCccccCCeeeecCCeecCCCCHHHHHHH
Q psy2533 84 PNRLDSSMKSHSVRDMLRQEAKLSEMSEEGAGQDRLGIYIKSVVKGGAADANGRLQAGDQLLKVDGQSLVGITQEKAAEY 163 (684)
Q Consensus 84 ~~~~~s~~~~V~v~k~~~~GLGfsI~GG~~~~~~~~gIfIs~V~pGGpA~r~GrLqvGDrILaVNG~sl~g~sh~eAV~l 163 (684)
+..+.+..+.|.|.|..+.||||+|.||.+.. .|+||..|.+||||++++.|++||+|++|||+++.+++|.+++.+
T Consensus 71 p~~~~~~~r~V~L~k~~~~glGf~I~gg~d~~---~gi~V~~V~~gspA~~~aGL~~GD~Il~VNG~~v~~~t~~e~v~~ 147 (263)
T 1z87_A 71 PEALLLQRRRVTVRKADAGGLGISIKGGRENK---MPILISKIFKGLAADQTEALFVGDAILSVNGEDLSSATHDEAVQA 147 (263)
T ss_dssp CCTTSCSSEEECCCTTTTCCCCCEEEEETTTT---EEEEEEECCTTSHHHHCTTCCSSCEEEEESSCBCTTSCHHHHHHH
T ss_pred CCcCCCccEEEEEEeCCCCCEeEEEeeccCCC---CCEEEEEECCCCHHHHhCCCCCCCEEEEECCEECCCcCHHHHHHH
Confidence 34556678899998888899999999987643 589999999999999964499999999999999999999999999
Q ss_pred HHcCCCEEEEEEEecCcc
Q psy2533 164 LVRTGPIVTLEIAKQGAI 181 (684)
Q Consensus 164 Lk~sg~~V~LvV~R~~~~ 181 (684)
|+..+..|.|+|.|....
T Consensus 148 l~~~g~~V~L~V~R~~~~ 165 (263)
T 1z87_A 148 LKKTGKEVVLEVKYMKEV 165 (263)
T ss_dssp HHHCCSCCCEEEECCSSS
T ss_pred HhcCCCeEEEEEEeCccc
Confidence 999999999999997654
No 75
>1mfg_A ERB-B2 interacting protein; PDZ domain, protein-peptide complex, erbin., signaling protein; 1.25A {Homo sapiens} SCOP: b.36.1.1 PDB: 1mfl_A
Probab=99.35 E-value=4.9e-12 Score=109.35 Aligned_cols=83 Identities=28% Similarity=0.341 Sum_probs=70.8
Q ss_pred EEEecCCCcccEEEEeccCC---CC--CcccEEEEEecCCChhcccCccccCCeeeecCCeecCCCCHHHHHHHHHcCCC
Q psy2533 95 SVRDMLRQEAKLSEMSEEGA---GQ--DRLGIYIKSVVKGGAADANGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGP 169 (684)
Q Consensus 95 ~v~k~~~~GLGfsI~GG~~~---~~--~~~gIfIs~V~pGGpA~r~GrLqvGDrILaVNG~sl~g~sh~eAV~lLk~sg~ 169 (684)
++....+.+|||+|.||.+. +. ...+++|..|.++|||++ | |++||+|++|||.++.++++.+++.+++..+.
T Consensus 6 ~v~l~~~~~lG~~i~gg~~~~~~p~~~~~~gv~V~~V~~~spA~~-g-L~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~ 83 (95)
T 1mfg_A 6 RVRVEKDPELGFSISGGVGGRGNPFRPDDDGIFVTRVQPEGPASK-L-LQPGDKIIQANGYSFINIEHGQAVSLLKTFQN 83 (95)
T ss_dssp EEEEECSSSCSEEEEECBTSCCCSSSTTCCCEEEEEECTTSTTTT-T-CCTTCEEEEETTEECTTCBHHHHHHHHHHCCS
T ss_pred EEEECCCCCCCEEEeCCcCccCCccccCCCCEEEEEECCCCchhh-C-CCCCCEEEEECCEEcCCCCHHHHHHHhhcCCC
Confidence 33334455999999998642 11 345899999999999999 7 99999999999999999999999999999899
Q ss_pred EEEEEEEecC
Q psy2533 170 IVTLEIAKQG 179 (684)
Q Consensus 170 ~V~LvV~R~~ 179 (684)
.|.|+|.|..
T Consensus 84 ~v~l~v~R~~ 93 (95)
T 1mfg_A 84 TVELIIVREV 93 (95)
T ss_dssp EEEEEEEEEC
T ss_pred eEEEEEEeCC
Confidence 9999999864
No 76
>2he4_A Na(+)/H(+) exchange regulatory cofactor NHE-RF2; phosphorylation, structural genomics, structural genomics consortium, SGC, unknown function; 1.45A {Homo sapiens} PDB: 2ozf_A
Probab=99.35 E-value=4.4e-12 Score=108.65 Aligned_cols=84 Identities=25% Similarity=0.350 Sum_probs=74.3
Q ss_pred CceEEEEEecCCCcccEEEEeccCCCCCcccEEEEEecCCChhcccCccccCCeeeecCCeecCCCCHHHHHHHHHcCCC
Q psy2533 90 SMKSHSVRDMLRQEAKLSEMSEEGAGQDRLGIYIKSVVKGGAADANGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGP 169 (684)
Q Consensus 90 ~~~~V~v~k~~~~GLGfsI~GG~~~~~~~~gIfIs~V~pGGpA~r~GrLqvGDrILaVNG~sl~g~sh~eAV~lLk~sg~ 169 (684)
..++|.+.+.. .+|||++.++.+ ..+++|..|.++|||+++| |++||+|++|||.++.+++|.+++.+|+..+.
T Consensus 4 ~~r~v~l~k~~-~g~G~~~~~~~~----~~gv~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~ 77 (90)
T 2he4_A 4 RPRLCHLRKGP-QGYGFNLHSDKS----RPGQYIRSVDPGSPAARSG-LRAQDRLIEVNGQNVEGLRHAEVVASIKARED 77 (90)
T ss_dssp CCEEEEEECBT-TBCCEEEEECSS----SSSEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTSCHHHHHHHHTTSSS
T ss_pred CcEEEEEEECC-CCccEEEEccCC----CCCEEEEEECCCChHHHCC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCC
Confidence 45677777654 699999998754 2479999999999999999 99999999999999999999999999999889
Q ss_pred EEEEEEEecC
Q psy2533 170 IVTLEIAKQG 179 (684)
Q Consensus 170 ~V~LvV~R~~ 179 (684)
.|.|+|.|..
T Consensus 78 ~v~l~v~r~~ 87 (90)
T 2he4_A 78 EARLLVVGPS 87 (90)
T ss_dssp EEEEEEECCC
T ss_pred cEEEEEEccC
Confidence 9999998865
No 77
>1uep_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.35 E-value=1.2e-12 Score=115.28 Aligned_cols=86 Identities=23% Similarity=0.358 Sum_probs=74.7
Q ss_pred ceEEEEEecCCCcccEEEEeccCCCCCcccEEEEEecCCChhcccCccccCCeeeecCCeecCCCCHHHHHHHHHcC--C
Q psy2533 91 MKSHSVRDMLRQEAKLSEMSEEGAGQDRLGIYIKSVVKGGAADANGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRT--G 168 (684)
Q Consensus 91 ~~~V~v~k~~~~GLGfsI~GG~~~~~~~~gIfIs~V~pGGpA~r~GrLqvGDrILaVNG~sl~g~sh~eAV~lLk~s--g 168 (684)
...+.+.+ ...+|||+|.+|.+. ..+++|..|.++|||+++|+|++||+|++|||.++.+++|.+++.+|+.. +
T Consensus 10 ~~~v~l~~-~~~g~G~~i~~g~~~---~~~~~V~~V~~~spA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~~~~g 85 (103)
T 1uep_A 10 ELDVHLRR-MESGFGFRILGGDEP---GQPILIGAVIAMGSADRDGRLHPGDELVYVDGIPVAGKTHRYVIDLMHHAARN 85 (103)
T ss_dssp EECCEEES-SSSSCCEEECCCCST---TSCCBEEEECTTSTTGGGTCCCTTCEEEEETTEECTTSCHHHHHHHHHHHHHH
T ss_pred EEEEEEEe-CCCccCEEEeeecCC---CCCeEEEEeCCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCC
Confidence 34455555 678899999987653 24799999999999999999999999999999999999999999999987 7
Q ss_pred CEEEEEEEecCc
Q psy2533 169 PIVTLEIAKQGA 180 (684)
Q Consensus 169 ~~V~LvV~R~~~ 180 (684)
..|.|+|.|...
T Consensus 86 ~~v~l~v~R~~~ 97 (103)
T 1uep_A 86 GQVNLTVRRKVL 97 (103)
T ss_dssp TEEEEEEEEECC
T ss_pred CcEEEEEEeCCC
Confidence 899999998753
No 78
>2jre_A C60-1 PDZ domain peptide; de novo protein; NMR {Synthetic}
Probab=99.34 E-value=5.9e-12 Score=111.31 Aligned_cols=91 Identities=26% Similarity=0.404 Sum_probs=77.9
Q ss_pred CceEEEEE-ecCCCcccEEEEeccCCCC--CcccEEEEEecCCChhcccCccccCCeeeecCCeecCCCCHHHHHHHHHc
Q psy2533 90 SMKSHSVR-DMLRQEAKLSEMSEEGAGQ--DRLGIYIKSVVKGGAADANGRLQAGDQLLKVDGQSLVGITQEKAAEYLVR 166 (684)
Q Consensus 90 ~~~~V~v~-k~~~~GLGfsI~GG~~~~~--~~~gIfIs~V~pGGpA~r~GrLqvGDrILaVNG~sl~g~sh~eAV~lLk~ 166 (684)
....+.+. +....+|||+|.++.+... ...+++|..|.++|||+++|+|++||+|++|||.++.++++.+++.+|+.
T Consensus 12 ~~~~v~l~r~~~~~~lG~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~ 91 (108)
T 2jre_A 12 SLYSVELFREKDTSSLGISISGMRDQSTTGEATGIYVKSLIPGSAAALDGRIEPNDKILRVDDVNVQGMAQSDVVEVLRN 91 (108)
T ss_dssp EEEEEEEECCSTTSCCSEEEECCCCCSCSSCCCCCEEEEECTTSHHHHHSSCCSSEEEEEETTEECTTSCHHHHHHHHHH
T ss_pred EEEEEEEEecCCCCCcCEEEEcccCCCCCCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 34455555 4678899999998865432 34589999999999999999999999999999999999999999999998
Q ss_pred CCCEEEEEEEecCc
Q psy2533 167 TGPIVTLEIAKQGA 180 (684)
Q Consensus 167 sg~~V~LvV~R~~~ 180 (684)
.+..|.|+|.|...
T Consensus 92 ~g~~v~l~v~R~~~ 105 (108)
T 2jre_A 92 AGNPVRLLLIRRLP 105 (108)
T ss_dssp HCSEEEEEEEECCC
T ss_pred CCCeEEEEEEeCCc
Confidence 88999999998764
No 79
>2opg_A Multiple PDZ domain protein; structural protein, structural genomics, structural genomics consortium, SGC; 1.50A {Homo sapiens}
Probab=99.34 E-value=6e-12 Score=109.23 Aligned_cols=87 Identities=31% Similarity=0.330 Sum_probs=75.8
Q ss_pred ceEEEEEecCCCcccEEEEeccCCCCCcccEEEEEecCCChhcccCccccCCeeeecCCeecCCCCHHHHHHHHHcCCCE
Q psy2533 91 MKSHSVRDMLRQEAKLSEMSEEGAGQDRLGIYIKSVVKGGAADANGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGPI 170 (684)
Q Consensus 91 ~~~V~v~k~~~~GLGfsI~GG~~~~~~~~gIfIs~V~pGGpA~r~GrLqvGDrILaVNG~sl~g~sh~eAV~lLk~sg~~ 170 (684)
..+|.+.+ ...+|||+|.++.+.. ..+++|..|.++|||+++|+|++||+|++|||.++.++++.+++.+++..+..
T Consensus 5 ~~~v~l~~-~~~~lG~~l~~~~~~~--~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~ 81 (98)
T 2opg_A 5 ETTIEISK-GRTGLGLSIVGGSDTL--LGAIIIHEVYEEGAACKDGRLWAGDQILEVNGIDLRKATHDEAINVLRQTPQR 81 (98)
T ss_dssp EEEEEEEC-BTTBTCEEEEECTTST--TCSEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTCCSE
T ss_pred EEEEEEEE-CCCcccEEEecCCCCC--CCCEEEEEECCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCe
Confidence 45566655 4678999999876543 24799999999999999999999999999999999999999999999988899
Q ss_pred EEEEEEecCc
Q psy2533 171 VTLEIAKQGA 180 (684)
Q Consensus 171 V~LvV~R~~~ 180 (684)
|.|+|.|...
T Consensus 82 v~l~v~R~~~ 91 (98)
T 2opg_A 82 VRLTLYRDEA 91 (98)
T ss_dssp EEEEEEECSS
T ss_pred EEEEEEcCCC
Confidence 9999998764
No 80
>4a8c_A Periplasmic PH-dependent serine endoprotease DEGQ; chaperone, hydrolase; 7.50A {Escherichia coli} PDB: 4a8a_A 4a8b_A 4a9g_A
Probab=99.34 E-value=1.1e-11 Score=135.45 Aligned_cols=157 Identities=17% Similarity=0.209 Sum_probs=106.6
Q ss_pred ccEEEEEecCCChhcccCccccCCeeeecCCeecCCCCHHHHHHHHH--cCCCEEEEEEEecCccccccccccCCCCCcc
Q psy2533 119 LGIYIKSVVKGGAADANGRLQAGDQLLKVDGQSLVGITQEKAAEYLV--RTGPIVTLEIAKQGAIYHGLATLLSQPSPVM 196 (684)
Q Consensus 119 ~gIfIs~V~pGGpA~r~GrLqvGDrILaVNG~sl~g~sh~eAV~lLk--~sg~~V~LvV~R~~~~~~~~stl~s~psP~~ 196 (684)
.|++|..|.++|||+++| |++||+|++|||..+.+.. +...++. ..+..|.|+|.|.........++...+....
T Consensus 263 ~G~~V~~V~~~spA~~aG-L~~GD~I~~vnG~~v~~~~--~l~~~l~~~~~g~~v~l~v~R~g~~~~~~v~l~~~~~~~~ 339 (436)
T 4a8c_A 263 RGAFVSEVLPGSGSAKAG-VKAGDIITSLNGKPLNSFA--ELRSRIATTEPGTKVKLGLLRNGKPLEVEVTLDTSTSSSA 339 (436)
T ss_pred cceEEEEECCCChHHHCC-CCCCCEEEEECCEECCCHH--HHHHHHHhcCCCCEEEEEEEECCEEEEEEEEECCCCcccc
Confidence 579999999999999999 9999999999999998764 4444444 4578999999998754332222211110000
Q ss_pred ccCCCccccccccccccccccccccccCCCCCCCCCCCCCCCCCCcccccccccccCCCCCCCCCCCCCCCCCCCCCCcE
Q psy2533 197 TRGQVKTYESTISVQQRKERSSQNLHDMNNGVGGSHHPAPGPGSGMNHHPVVSRQASTPSLPQASPYPAPAPAPADPERF 276 (684)
Q Consensus 197 ~s~~~~~ses~ls~~~~~~~~sv~L~k~s~GlGfSi~~~~g~G~Gi~ikpIv~~~~~t~slp~~sl~~gs~~~~~d~GIF 276 (684)
. .....+|+... ...+. . ..+...|++
T Consensus 340 ~-------------------------~~~~~~gl~~~---------~~~~~-------------~------~~~~~~gv~ 366 (436)
T 4a8c_A 340 S-------------------------AEMITPALEGA---------TLSDG-------------Q------LKDGGKGIK 366 (436)
T ss_pred c-------------------------ccccccCceee---------ecccc-------------c------ccCCCCCEE
Confidence 0 00000111110 00000 0 001235889
Q ss_pred EEecc--hhhhhcCCCCCCCEEEEECCEecCCCCHHHHHHHHHhCCCeEEEEEEeCCccc
Q psy2533 277 YQNLS--VYRNQNGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGPIVTLEIAKQGAIY 334 (684)
Q Consensus 277 V~sI~--GaAardGrLr~GDqIL~VNG~sl~g~Th~eAv~lLk~sg~~VtL~V~R~~~~~ 334 (684)
|..|. ++|++.| |++||+|++|||+.+.+ .++...+|+..+..|.|.|.|.+..+
T Consensus 367 V~~V~~~spA~~aG-L~~GD~I~~vng~~v~~--~~~~~~~l~~~~~~v~l~v~R~g~~~ 423 (436)
T 4a8c_A 367 IDEVVKGSPAAQAG-LQKDDVIIGVNRDRVNS--IAEMRKVLAAKPAIIALQIVRGNESI 423 (436)
T ss_pred EEEeCCCCHHHHcC-CCCCCEEEEECCEECCC--HHHHHHHHHhCCCeEEEEEEECCEEE
Confidence 99987 6777776 99999999999999975 57889999988889999999987654
No 81
>1wi2_A Riken cDNA 2700099C19; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.34 E-value=5.4e-12 Score=111.36 Aligned_cols=87 Identities=22% Similarity=0.307 Sum_probs=77.1
Q ss_pred CCceEEEEEecCCCcccEEEEeccCCCCCcccEEEEEecCCChhcccCccccCCeeeecCCeecCCCCHHHHHHHHHcCC
Q psy2533 89 SSMKSHSVRDMLRQEAKLSEMSEEGAGQDRLGIYIKSVVKGGAADANGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTG 168 (684)
Q Consensus 89 s~~~~V~v~k~~~~GLGfsI~GG~~~~~~~~gIfIs~V~pGGpA~r~GrLqvGDrILaVNG~sl~g~sh~eAV~lLk~sg 168 (684)
...++|.+.+....+|||+|.++.+.. .+++|..|.+++||+++| |++||+|++|||.++.++++.+++.+|+. +
T Consensus 14 ~~~~~v~l~k~~~~~lG~~~~~~~~~~---~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l~~-~ 88 (104)
T 1wi2_A 14 FLPRIVTLKKPPGAQLGFNIRGGKASQ---LGIFISKVIPDSDAHRAG-LQEGDQVLAVNDVDFQDIEHSKAVEILKT-A 88 (104)
T ss_dssp SCCEEEEECCCTTCCCSEEEECCSSSC---CCCEEEEECTTSHHHHHT-CCTTCEEEEETTEECSSCCHHHHHHHHHH-S
T ss_pred CCCEEEEEEeCCCCCccEEEEcccCCC---CCEEEEEeCCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHhC-C
Confidence 445788888888899999999875532 479999999999999999 99999999999999999999999999998 7
Q ss_pred CEEEEEEEecCc
Q psy2533 169 PIVTLEIAKQGA 180 (684)
Q Consensus 169 ~~V~LvV~R~~~ 180 (684)
..+.|+|.|...
T Consensus 89 ~~v~l~v~r~~~ 100 (104)
T 1wi2_A 89 REISMRVRFFSG 100 (104)
T ss_dssp SSEEEEEECCCC
T ss_pred CEEEEEEEECCC
Confidence 889999988653
No 82
>1q3o_A Shank1; PDZ, GKAP, peptide binding protein; 1.80A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1q3p_A 3qjm_A 3qjn_A 3o5n_A*
Probab=99.34 E-value=6.7e-12 Score=111.49 Aligned_cols=90 Identities=19% Similarity=0.250 Sum_probs=78.0
Q ss_pred CceEEEEEecCCCcccEEEEeccCCCC---------CcccEEEEEecCCChhcccCccccCCeeeecCCeecCCCCHHHH
Q psy2533 90 SMKSHSVRDMLRQEAKLSEMSEEGAGQ---------DRLGIYIKSVVKGGAADANGRLQAGDQLLKVDGQSLVGITQEKA 160 (684)
Q Consensus 90 ~~~~V~v~k~~~~GLGfsI~GG~~~~~---------~~~gIfIs~V~pGGpA~r~GrLqvGDrILaVNG~sl~g~sh~eA 160 (684)
..+.+.+.+....+|||+|.++.+... ...+++|..|.++|||+++| |++||+|++|||.++.+++|.++
T Consensus 7 ~~~~v~l~~~~~~g~G~~l~~~~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG-l~~GD~I~~vng~~v~~~~~~~~ 85 (109)
T 1q3o_A 7 KEKTVLLQKKDSEGFGFVLRGAKAQTPIEEFTPTPAFPALQYLESVDEGGVAWRAG-LRMGDFLIEVNGQNVVKVGHRQV 85 (109)
T ss_dssp EEEEEEEECCTTSCCSEEEEESSCCCTTSCCCCCSSCCSSEEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCCHHHH
T ss_pred CcEEEEEEECCCCCCcEEEEeccCCCCcccccccccCCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHH
Confidence 356788888888999999999865321 12379999999999999999 99999999999999999999999
Q ss_pred HHHHHcCCCEEEEEEEecCc
Q psy2533 161 AEYLVRTGPIVTLEIAKQGA 180 (684)
Q Consensus 161 V~lLk~sg~~V~LvV~R~~~ 180 (684)
+.+|+..+..|.|+|.|..+
T Consensus 86 ~~~l~~~~~~v~l~v~~~~~ 105 (109)
T 1q3o_A 86 VNMIRQGGNTLMVKVVMVTR 105 (109)
T ss_dssp HHHHHHTTTEEEEEEEEEEC
T ss_pred HHHHHhCCCEEEEEEEECCC
Confidence 99999888899999988643
No 83
>2qkv_A Inactivation-NO-after-potential D protein; PDZ domain, scaffolding protein, membrane, sensory transduction, vision; 1.55A {Drosophila melanogaster} PDB: 2qkt_A 2qku_A
Probab=99.34 E-value=5.1e-12 Score=110.11 Aligned_cols=86 Identities=19% Similarity=0.298 Sum_probs=75.8
Q ss_pred CCceEEEEEecCCCcccEEEEeccCCCCCcccEEEEEecCCChhcccCccccCCeeeecCCeecCCCCHHHHHHHHHcCC
Q psy2533 89 SSMKSHSVRDMLRQEAKLSEMSEEGAGQDRLGIYIKSVVKGGAADANGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTG 168 (684)
Q Consensus 89 s~~~~V~v~k~~~~GLGfsI~GG~~~~~~~~gIfIs~V~pGGpA~r~GrLqvGDrILaVNG~sl~g~sh~eAV~lLk~sg 168 (684)
....++.+.+....+|||++.+. ..+++|..|.++|||+++|+|++||+|++|||.++.++++.+++.+++..+
T Consensus 7 ~~~~~v~l~~~~~~glG~~~~~~------~~gv~V~~V~~~spA~~aG~L~~GD~I~~Ing~~v~~~~~~~~~~~~~~~~ 80 (96)
T 2qkv_A 7 LEKFNVDLMKKAGKELGLSLSPN------EIGCTIADLIQGQYPEIDSKLQRGDIITKFNGDALEGLPFQVSYALFKGAN 80 (96)
T ss_dssp CCCEEEEEECBTTBCCCEEEEEC------SSSEEEEEECTTSCHHHHHHCCTTCEEEEETTEECTTCCHHHHHHHHHTCS
T ss_pred CceEEEEEEeCCCCCccEEEEeC------CCcEEEEEeCCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHhcCC
Confidence 34556777777888999999862 247999999999999999999999999999999999999999999999998
Q ss_pred CEEEEEEEecCc
Q psy2533 169 PIVTLEIAKQGA 180 (684)
Q Consensus 169 ~~V~LvV~R~~~ 180 (684)
+.|.|+|.|..+
T Consensus 81 ~~v~l~v~R~~p 92 (96)
T 2qkv_A 81 GKVSMEVTRPKP 92 (96)
T ss_dssp SEEEEEEECCCC
T ss_pred CcEEEEEEeCCc
Confidence 999999998654
No 84
>1nf3_C PAR-6B; semi-CRIB motif, switch I and II, PDZ domain, GTPase binding domain, signaling protein; HET: GNP; 2.10A {Mus musculus} SCOP: b.36.1.1 PDB: 2lc6_A 1ry4_A 1x8s_A 2lc7_A 1rzx_A
Probab=99.33 E-value=2.2e-12 Score=118.39 Aligned_cols=93 Identities=16% Similarity=0.300 Sum_probs=79.6
Q ss_pred CCCCceEEEEEecC-CCcccEEEEeccCCCC------CcccEEEEEecCCChhcccCccccCCeeeecCCeecCCCCHHH
Q psy2533 87 LDSSMKSHSVRDML-RQEAKLSEMSEEGAGQ------DRLGIYIKSVVKGGAADANGRLQAGDQLLKVDGQSLVGITQEK 159 (684)
Q Consensus 87 ~~s~~~~V~v~k~~-~~GLGfsI~GG~~~~~------~~~gIfIs~V~pGGpA~r~GrLqvGDrILaVNG~sl~g~sh~e 159 (684)
.....+.|.+.+.+ +.+|||+|.++.+... ...+++|..|.++|||+++|+|++||+|++|||.++.+++|.+
T Consensus 26 ~~~~~r~v~l~k~~~~~~lG~~i~~~~~~~~~~~g~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~ 105 (128)
T 1nf3_C 26 LPETHRRVRLCKYGTEKPLGFYIRDGSSVRVTPHGLEKVPGIFISRLVPGGLAQSTGLLAVNDEVLEVNGIEVSGKSLDQ 105 (128)
T ss_dssp SCTTCEEEEECCSSTTSCCCEEEEEEEEEEEETTEEEEEEEEEEEEECTTCHHHHHTCCCTTCEEEEETTEESTTCCHHH
T ss_pred CCCccEEEEEEECCCCCCccEEEEccccccccccccCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHH
Confidence 34567788888775 6899999998754210 1247999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCEEEEEEEecC
Q psy2533 160 AAEYLVRTGPIVTLEIAKQG 179 (684)
Q Consensus 160 AV~lLk~sg~~V~LvV~R~~ 179 (684)
++.+|+..+..|.|+|.|..
T Consensus 106 ~~~~l~~~~~~v~l~v~r~~ 125 (128)
T 1nf3_C 106 VTDMMIANSRNLIITVRPAN 125 (128)
T ss_dssp HHHHHHHTTTSEEEEEECCC
T ss_pred HHHHHHcCCCeEEEEEEECC
Confidence 99999998889999998865
No 85
>2h2b_A Tight junction protein ZO-1; PDZ domain, phage derived high affinity ligand, cell adhesio; 1.60A {Homo sapiens} PDB: 2h2c_A 2h3m_A 2rrm_A
Probab=99.33 E-value=8.5e-12 Score=110.11 Aligned_cols=90 Identities=19% Similarity=0.261 Sum_probs=78.4
Q ss_pred CCceEEEEEecCCCcccEEEEeccCCCC---CcccEEEEEecCCChhcccCccccCCeeeecCCeecCCCCHHHHHHHHH
Q psy2533 89 SSMKSHSVRDMLRQEAKLSEMSEEGAGQ---DRLGIYIKSVVKGGAADANGRLQAGDQLLKVDGQSLVGITQEKAAEYLV 165 (684)
Q Consensus 89 s~~~~V~v~k~~~~GLGfsI~GG~~~~~---~~~gIfIs~V~pGGpA~r~GrLqvGDrILaVNG~sl~g~sh~eAV~lLk 165 (684)
....+|.+.|.++.+|||+|.+|.+.+. ...+++|..|.++|||+ .| |++||+|++|||.++.++++.+++..++
T Consensus 6 ~~~~~v~l~k~~~~glG~~i~~~~~~~~~~~~~~gv~V~~V~~~spA~-ag-l~~GD~I~~vng~~v~~~~~~~~~~~~~ 83 (107)
T 2h2b_A 6 WEQHTVTLHRAPGFGFGIAISGGRDNPHFQSGETSIVISDVLKGGPAE-GQ-LQENDRVAMVNGVSMDNVEHAFAVQQLR 83 (107)
T ss_dssp EEEEEEEEECBTTTBTCEEEEECTTSCCTTTCCCCEEEEEECTTSTTB-TT-BCTTCEEEEETTEECTTCCHHHHHHHHH
T ss_pred ceeEEEEEEeCCCCccCEEEecCcCCCcccCCCCCEEEEEECCCCchh-hC-CCCCCEEEEECCEECCCccHHHHHHHhh
Confidence 4467788888888999999999876432 34589999999999999 77 9999999999999999999999999998
Q ss_pred cCCCEEEEEEEecCc
Q psy2533 166 RTGPIVTLEIAKQGA 180 (684)
Q Consensus 166 ~sg~~V~LvV~R~~~ 180 (684)
..+..|.|+|.|...
T Consensus 84 ~~g~~v~l~v~R~~~ 98 (107)
T 2h2b_A 84 KSGKNAKITIRRKKG 98 (107)
T ss_dssp TCCSEEEEEEEEESC
T ss_pred CCCCEEEEEEEECCC
Confidence 889999999998764
No 86
>1va8_A Maguk P55 subfamily member 5; PDZ domain, palmitoylated 5, PALS1 protein, structural genomics, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.33 E-value=8.3e-12 Score=112.02 Aligned_cols=86 Identities=21% Similarity=0.324 Sum_probs=76.6
Q ss_pred CCceEEEEEecCCCcccEEEEeccCCCCCcccEEEEEecCCChhcccCccccCCeeeecCCeecCCCCHHHHHHHHHcCC
Q psy2533 89 SSMKSHSVRDMLRQEAKLSEMSEEGAGQDRLGIYIKSVVKGGAADANGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTG 168 (684)
Q Consensus 89 s~~~~V~v~k~~~~GLGfsI~GG~~~~~~~~gIfIs~V~pGGpA~r~GrLqvGDrILaVNG~sl~g~sh~eAV~lLk~sg 168 (684)
...++|.+.+....+|||.+.++ ..+++|..|.++|||+++|.|++||+|++|||.++.++++.+++.+|+..+
T Consensus 24 ~~~~~v~l~k~~~~~lG~~i~~~------~~gv~V~~V~~~spA~~aGll~~GD~I~~vng~~v~~~~~~~~~~~l~~~~ 97 (113)
T 1va8_A 24 ETVKIVRIEKARDIPLGATVRNE------MDSVIISRIVKGGAAEKSGLLHEGDEVLEINGIEIRGKDVNEVFDLLSDMH 97 (113)
T ss_dssp EECEEEEEEECTTCCCCEEEEEC------SSSEEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCCHHHHHHHHHHCC
T ss_pred CceEEEEEEeCCCCceeEEEEeC------CCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 46778889888888999999875 247999999999999999955999999999999999999999999999888
Q ss_pred CEEEEEEEecCc
Q psy2533 169 PIVTLEIAKQGA 180 (684)
Q Consensus 169 ~~V~LvV~R~~~ 180 (684)
+.|.|+|.|...
T Consensus 98 ~~v~l~v~r~~~ 109 (113)
T 1va8_A 98 GTLTFVLIPSSG 109 (113)
T ss_dssp EEEEEEEECCCC
T ss_pred CeEEEEEEECCc
Confidence 899999987653
No 87
>3qe1_A Sorting nexin-27, G protein-activated inward RECT potassium channel 3 chimera; PDZ domain, PDZ binding, GIRK3 regulation, early endosomes; 1.68A {Rattus norvegicus} SCOP: b.36.1.0 PDB: 3qdo_A 3qgl_A
Probab=99.33 E-value=7e-12 Score=110.67 Aligned_cols=89 Identities=19% Similarity=0.286 Sum_probs=75.4
Q ss_pred CceEEEEEecCCCcccEEEEeccCCCCC---------cccEEEEEecCCChhcccCccccCCeeeecCCeecCCCCHHHH
Q psy2533 90 SMKSHSVRDMLRQEAKLSEMSEEGAGQD---------RLGIYIKSVVKGGAADANGRLQAGDQLLKVDGQSLVGITQEKA 160 (684)
Q Consensus 90 ~~~~V~v~k~~~~GLGfsI~GG~~~~~~---------~~gIfIs~V~pGGpA~r~GrLqvGDrILaVNG~sl~g~sh~eA 160 (684)
..++|.+.|... +|||+|.++.+.... .+.+||..|.++|||+++| |++||+|++|||.++.+++|.++
T Consensus 6 ~~r~v~l~k~~~-g~G~~l~~~~~~~~~~~~~~~~~~~p~~~V~~v~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~ 83 (107)
T 3qe1_A 6 SPRVVRIVKSES-GYGFNVRGQVSEGGQLRSINGELYAPLQHVSAVLPGGAADRAG-VRKGDRILEVNGVNVEGATHKQV 83 (107)
T ss_dssp CCEEEEEECBTT-BTCEEEECCSSSCCCCEESSSSEESCCEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHH
T ss_pred CcEEEEEEECCC-CCCEEEEcccccCCcceeccccccCCceEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHH
Confidence 456778777554 899999987443211 2456899999999999999 99999999999999999999999
Q ss_pred HHHHHcCCCEEEEEEEecCc
Q psy2533 161 AEYLVRTGPIVTLEIAKQGA 180 (684)
Q Consensus 161 V~lLk~sg~~V~LvV~R~~~ 180 (684)
+.+|+..+..|.|+|.|...
T Consensus 84 ~~~l~~~g~~v~l~v~r~~~ 103 (107)
T 3qe1_A 84 VDLIRAGEKELILTVLSVES 103 (107)
T ss_dssp HHHHHHCSSEEEEEEECSSC
T ss_pred HHHHHcCCCEEEEEEEcCCC
Confidence 99999999999999988753
No 88
>2i04_A Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1; PDZ, E6 binding, tumor suppressor, peptide binding protein; 2.15A {Mus musculus}
Probab=99.33 E-value=6.4e-12 Score=106.32 Aligned_cols=81 Identities=21% Similarity=0.382 Sum_probs=70.0
Q ss_pred EEEEEecCCCcccEEEEeccCCCCCcccEEEEEecCCChhcccCccccCCeeeecCCeecCCCCHHHHHHHHHcC--CCE
Q psy2533 93 SHSVRDMLRQEAKLSEMSEEGAGQDRLGIYIKSVVKGGAADANGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRT--GPI 170 (684)
Q Consensus 93 ~V~v~k~~~~GLGfsI~GG~~~~~~~~gIfIs~V~pGGpA~r~GrLqvGDrILaVNG~sl~g~sh~eAV~lLk~s--g~~ 170 (684)
++.+.| ...||||++.+|.+. ..+++|..|.++|||+++|+|++||+|++|||.++.++++.+++.+|+.. +..
T Consensus 3 ~v~l~k-~~~g~G~~i~~~~~~---~~~~~V~~v~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~g~~ 78 (85)
T 2i04_A 3 HTKLRK-SSRGFGFTVVGGDEP---DEFLQIKSLVLDGPAALDGKMETGDVIVSVNDTCVLGHTHAQVVKIFQSIPIGAS 78 (85)
T ss_dssp EEEEEC-BTTBSSEEEEECCST---TBCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTSCTTCE
T ss_pred EEEEEE-CCCCCCEEEEcccCC---CCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCe
Confidence 355554 557999999987542 35799999999999999999999999999999999999999999999986 788
Q ss_pred EEEEEEe
Q psy2533 171 VTLEIAK 177 (684)
Q Consensus 171 V~LvV~R 177 (684)
|.|+|.|
T Consensus 79 v~l~v~R 85 (85)
T 2i04_A 79 VDLELCR 85 (85)
T ss_dssp EEEEEEC
T ss_pred EEEEEEC
Confidence 9998865
No 89
>1rgw_A ZAsp protein; PDZ, cypher, oracle, muscle, Z-DISK, sarcomere, structural protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 1wjl_A
Probab=99.33 E-value=2.8e-12 Score=108.40 Aligned_cols=77 Identities=16% Similarity=0.179 Sum_probs=68.9
Q ss_pred cCCCcccEEEEeccCCCCCcccEEEEEecCCChhcccCccccCCeeeecCCeecCCCCHHHHHHHHHcCCCEEEEEEEec
Q psy2533 99 MLRQEAKLSEMSEEGAGQDRLGIYIKSVVKGGAADANGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGPIVTLEIAKQ 178 (684)
Q Consensus 99 ~~~~GLGfsI~GG~~~~~~~~gIfIs~V~pGGpA~r~GrLqvGDrILaVNG~sl~g~sh~eAV~lLk~sg~~V~LvV~R~ 178 (684)
....+|||+|.+|.+.. .+++|..|.++|||+++| |++||+|++|||.++.++++.+++.+++..+..|.|+|.|.
T Consensus 8 ~~~~~~G~~l~gg~~~~---~~v~V~~V~~~spA~~aG-l~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~l~v~R~ 83 (85)
T 1rgw_A 8 TGPGPWGFRLQGGKDFN---MPLTISRITPGSKAAQSQ-LSQGDLVVAIDGVNTDTMTHLEAQNKIKSASYNLSLTLQKS 83 (85)
T ss_dssp CCSSCCCEEECCCGGGT---SCCBEEEECTTSHHHHSS-CCCCSBEEEETTEECTTCCHHHHHHHHTTCSSCEEEEEESC
T ss_pred eCCCccCEEEEeccCCC---CCeEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCcCHHHHHHHHHcCCCeEEEEEEeC
Confidence 46689999999876543 479999999999999999 99999999999999999999999999998888899999875
Q ss_pred C
Q psy2533 179 G 179 (684)
Q Consensus 179 ~ 179 (684)
.
T Consensus 84 ~ 84 (85)
T 1rgw_A 84 K 84 (85)
T ss_dssp C
T ss_pred C
Confidence 3
No 90
>2r4h_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; transferase, STRU genomics, structural genomics consortium, SGC, ATP-binding; HET: HIS; 2.05A {Homo sapiens}
Probab=99.33 E-value=5.3e-12 Score=113.09 Aligned_cols=87 Identities=16% Similarity=0.341 Sum_probs=75.4
Q ss_pred CCceEEEEEecCCCcccEEEEeccCCCCCcccEEEEEecCCChhcccCccccCCeeeecCCeecCCCCHHHHHHHHHcCC
Q psy2533 89 SSMKSHSVRDMLRQEAKLSEMSEEGAGQDRLGIYIKSVVKGGAADANGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTG 168 (684)
Q Consensus 89 s~~~~V~v~k~~~~GLGfsI~GG~~~~~~~~gIfIs~V~pGGpA~r~GrLqvGDrILaVNG~sl~g~sh~eAV~lLk~sg 168 (684)
...+.|.+.+. ..||||+|.+|.+. ..+++|..|.++|||+++|+|++||+|++|||.++.++++.+++.+++..+
T Consensus 23 ~~~~~v~l~~~-~~glG~~l~~~~~~---~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~g 98 (112)
T 2r4h_A 23 MDFYTVELERG-AKGFGFSLRGGREY---NMDLYVLRLAEDGPAERSGKMRIGDEILEINGETTKNMKHSRAIELIKNGG 98 (112)
T ss_dssp CCEEEEEEECB-TTBTSEEEEECGGG---TCCEEEEEECTTSHHHHTTCCCTTCEEEEETTEECTTCCHHHHHHHHHTTT
T ss_pred CceEEEEEEcC-CCccCEEEeccccC---CCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 34566777654 47899999987543 247999999999999999999999999999999999999999999999889
Q ss_pred CEEEEEEEecC
Q psy2533 169 PIVTLEIAKQG 179 (684)
Q Consensus 169 ~~V~LvV~R~~ 179 (684)
..|.|+|.|..
T Consensus 99 ~~v~l~v~R~~ 109 (112)
T 2r4h_A 99 RRVRLFLKRGE 109 (112)
T ss_dssp TEEEEEEECCE
T ss_pred CeEEEEEEeCC
Confidence 99999998864
No 91
>2la8_A Inactivation-NO-after-potential D protein, KON-TI peptide; peptide binding protein; NMR {Drosophila melanogaster}
Probab=99.32 E-value=3.7e-12 Score=113.73 Aligned_cols=83 Identities=19% Similarity=0.319 Sum_probs=74.4
Q ss_pred eEEEEEecCCCcccEEEEeccCCCCCcccEEEEEecCCChhcccCccccCCeeeecCCeecCCCCHHHHHHHHHcCCCEE
Q psy2533 92 KSHSVRDMLRQEAKLSEMSEEGAGQDRLGIYIKSVVKGGAADANGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGPIV 171 (684)
Q Consensus 92 ~~V~v~k~~~~GLGfsI~GG~~~~~~~~gIfIs~V~pGGpA~r~GrLqvGDrILaVNG~sl~g~sh~eAV~lLk~sg~~V 171 (684)
.+|.+.++...+|||++.+. ..|++|..|.+||||+++|+|++||+|++|||.++.++++.+++.+++..++.|
T Consensus 4 ~~v~L~k~~~~glG~~i~~~------~~gv~V~~V~~gspA~~aG~L~~GD~Il~Ing~~v~~~~~~~~~~~~~~~~~~v 77 (106)
T 2la8_A 4 FNVDLMKKAGKELGLSLSPN------EIGCTIADLIQGQYPEIDSKLQRGDIITKFNGDALEGLPFQVCYALFKGANGKV 77 (106)
T ss_dssp EEEEECCBSSSTTCCEEEEC------SSSEEEEECCTTSCHHHHTTCCTTCEEEEESSCBCSSSCHHHHHHHHHSCBSCE
T ss_pred EEEEEEeCCCCccCEEEEeC------CCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHhCCCCeE
Confidence 45667778889999999862 247999999999999999999999999999999999999999999999998899
Q ss_pred EEEEEecCc
Q psy2533 172 TLEIAKQGA 180 (684)
Q Consensus 172 ~LvV~R~~~ 180 (684)
.|+|.|..+
T Consensus 78 ~l~v~R~~~ 86 (106)
T 2la8_A 78 SMEVTRPKP 86 (106)
T ss_dssp EEEEEECCS
T ss_pred EEEEEeCCC
Confidence 999999754
No 92
>1x5q_A LAP4 protein; PDZ domain, scribble homolog protein, hscrib, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.32 E-value=1.5e-11 Score=109.15 Aligned_cols=90 Identities=26% Similarity=0.408 Sum_probs=76.4
Q ss_pred CCceEEEEEecCCCcccEEEEeccCCC---CCcccEEEEEecCCChhcccCccccCCeeeecCCeecCCCCHHHHHHHHH
Q psy2533 89 SSMKSHSVRDMLRQEAKLSEMSEEGAG---QDRLGIYIKSVVKGGAADANGRLQAGDQLLKVDGQSLVGITQEKAAEYLV 165 (684)
Q Consensus 89 s~~~~V~v~k~~~~GLGfsI~GG~~~~---~~~~gIfIs~V~pGGpA~r~GrLqvGDrILaVNG~sl~g~sh~eAV~lLk 165 (684)
.....+.+.+ ...+|||+|.+|.+.. ....+++|..|.+++||+++| |++||+|++|||.++.++++.+++..++
T Consensus 14 ~~~~~~~l~~-~~~glG~~i~~g~~~~~~~~~~~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~~~ 91 (110)
T 1x5q_A 14 EEELTLTILR-QTGGLGISIAGGKGSTPYKGDDEGIFISRVSEEGPAARAG-VRVGDKLLEVNGVALQGAEHHEAVEALR 91 (110)
T ss_dssp CEEEEEEEEC-SSSSCSEEEEECTTSCCSSTTCCSEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHH
T ss_pred cceEEEEEec-CCCeeeEEEEccccCCccccCCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCcCHHHHHHHhh
Confidence 3444455544 4889999999986632 134689999999999999999 9999999999999999999999999999
Q ss_pred cCCCEEEEEEEecCc
Q psy2533 166 RTGPIVTLEIAKQGA 180 (684)
Q Consensus 166 ~sg~~V~LvV~R~~~ 180 (684)
..+..|.|+|.|...
T Consensus 92 ~~g~~v~l~v~R~g~ 106 (110)
T 1x5q_A 92 GAGTAVQMRVWRESG 106 (110)
T ss_dssp SCCSEEEEEEEECSS
T ss_pred CCCCeEEEEEEECCc
Confidence 889999999999764
No 93
>2dlu_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.32 E-value=1e-11 Score=110.51 Aligned_cols=86 Identities=28% Similarity=0.476 Sum_probs=75.1
Q ss_pred CceEEEEEecCCCcccEEEEeccCCCCCcccEEEEEecCCChhcccCccccCCeeeecCCeecCCCCHHHHHHHHHcCCC
Q psy2533 90 SMKSHSVRDMLRQEAKLSEMSEEGAGQDRLGIYIKSVVKGGAADANGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGP 169 (684)
Q Consensus 90 ~~~~V~v~k~~~~GLGfsI~GG~~~~~~~~gIfIs~V~pGGpA~r~GrLqvGDrILaVNG~sl~g~sh~eAV~lLk~sg~ 169 (684)
..+.+.+.+ ...+|||.|.++.+ .+++|..|.++|||+++|+|++||+|++|||.++.++++.+++.+|+..+.
T Consensus 15 ~~~~v~l~~-~~~~lG~~l~~~~~-----~g~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~g~ 88 (111)
T 2dlu_A 15 HVEEVELIN-DGSGLGFGIVGGKT-----SGVVVRTIVPGGLADRDGRLQTGDHILKIGGTNVQGMTSEQVAQVLRNCGN 88 (111)
T ss_dssp EEEEEEEEC-CSSCCCEEEECCSS-----SSBEEEEECTTSSHHHHTCCCSSCEEEEESSCCCTTSCHHHHHHHHHHHCS
T ss_pred ceEEEEEEe-CCCccCEEEeccCC-----CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCC
Confidence 456666665 56789999997643 379999999999999999999999999999999999999999999998889
Q ss_pred EEEEEEEecCcc
Q psy2533 170 IVTLEIAKQGAI 181 (684)
Q Consensus 170 ~V~LvV~R~~~~ 181 (684)
.|.|+|.|....
T Consensus 89 ~v~l~v~R~~~~ 100 (111)
T 2dlu_A 89 SVRMLVARDPAG 100 (111)
T ss_dssp EEEEEEEESCTT
T ss_pred eEEEEEEeCCCC
Confidence 999999987643
No 94
>3e17_A Tight junction protein ZO-2; domain swapping, alternative promoter usage, alternative splicing, cell junction, cell membrane, disease mutation; 1.75A {Homo sapiens}
Probab=99.32 E-value=5.2e-12 Score=108.68 Aligned_cols=79 Identities=20% Similarity=0.315 Sum_probs=69.1
Q ss_pred EEEEEe-cCCCcccEEEEeccCCCCCcccEEEEEecCCChhcccCccccCCeeeecCCeecCCCCHHHHHHHHHcCCCEE
Q psy2533 93 SHSVRD-MLRQEAKLSEMSEEGAGQDRLGIYIKSVVKGGAADANGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGPIV 171 (684)
Q Consensus 93 ~V~v~k-~~~~GLGfsI~GG~~~~~~~~gIfIs~V~pGGpA~r~GrLqvGDrILaVNG~sl~g~sh~eAV~lLk~sg~~V 171 (684)
.+.+.+ ....+|||.+.+ ++||..|.+||||+++|+|++||+|++|||.++.+++|.+++.+|+.+++.|
T Consensus 3 ~v~l~~~~~~~~~G~~~~~---------gv~V~~V~~gspA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~i~~~~~~v 73 (88)
T 3e17_A 3 GVLLMKSRANEEYGLRLGS---------QIFVKEMTRTGLATKDGNLHEGDIILKINGTVTENMSLTDARKLIEKSRGKL 73 (88)
T ss_dssp EEEEECBTTBCCCCEEEEE---------EEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHTTTEE
T ss_pred EEEEEeCCCCCCCCEEEeC---------CEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeE
Confidence 345554 456789999975 6999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEecCc
Q psy2533 172 TLEIAKQGA 180 (684)
Q Consensus 172 ~LvV~R~~~ 180 (684)
.|+|.+...
T Consensus 74 ~L~v~~~~~ 82 (88)
T 3e17_A 74 QLVVLRDLE 82 (88)
T ss_dssp EEEECCC--
T ss_pred EEEEeCCCc
Confidence 999977543
No 95
>2djt_A Unnamed protein product; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.32 E-value=5.2e-12 Score=110.95 Aligned_cols=90 Identities=24% Similarity=0.332 Sum_probs=76.6
Q ss_pred CCceEEEEEecCCCcccEEEEeccCCCCCcccEEEEEecCCChhcccCccccCCeeeecCCeecCCCCHHHHHHHHHcCC
Q psy2533 89 SSMKSHSVRDMLRQEAKLSEMSEEGAGQDRLGIYIKSVVKGGAADANGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTG 168 (684)
Q Consensus 89 s~~~~V~v~k~~~~GLGfsI~GG~~~~~~~~gIfIs~V~pGGpA~r~GrLqvGDrILaVNG~sl~g~sh~eAV~lLk~sg 168 (684)
.....+.+.+. ..+|||.|.++.+.. ...+++|..|.+++||+++|+|++||+|++|||.++.++++.+++.+++..+
T Consensus 10 ~~~~~v~l~~~-~~g~G~~l~~~~~~~-~~~~v~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~g 87 (104)
T 2djt_A 10 SGHFSVELVRG-YAGFGLTLGGGRDVA-GDTPLAVRGLLKDGPAQRCGRLEVGDLVLHINGESTQGLTHAQAVERIRAGG 87 (104)
T ss_dssp CCCEEEEEECC-SSSCCEEEECCEETT-EECCCEEEEECTTCHHHHHCSCCTTCBEEEETTEECTTCCHHHHHHHHHHTC
T ss_pred CceEEEEEEeC-CCCccEEEEeccCCC-CCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 44566666654 479999999875531 2357999999999999999999999999999999999999999999999888
Q ss_pred CEEEEEEEecCc
Q psy2533 169 PIVTLEIAKQGA 180 (684)
Q Consensus 169 ~~V~LvV~R~~~ 180 (684)
..|.|+|.|...
T Consensus 88 ~~v~l~v~R~g~ 99 (104)
T 2djt_A 88 PQLHLVIRRPLS 99 (104)
T ss_dssp SEEEEEECCCCC
T ss_pred CeEEEEEEECCC
Confidence 999999988753
No 96
>1n7t_A 99-MER peptide of densin-180-like protein; PDZ domain, C-terminal peptide complex, high affnity ligand, signaling protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2h3l_A
Probab=99.31 E-value=5.5e-12 Score=110.80 Aligned_cols=87 Identities=25% Similarity=0.315 Sum_probs=73.2
Q ss_pred CCceEEEEEecCCCcccEEEEeccCC---CC--CcccEEEEEecCCChhcccCccccCCeeeecCCeecCCCCHHHHHHH
Q psy2533 89 SSMKSHSVRDMLRQEAKLSEMSEEGA---GQ--DRLGIYIKSVVKGGAADANGRLQAGDQLLKVDGQSLVGITQEKAAEY 163 (684)
Q Consensus 89 s~~~~V~v~k~~~~GLGfsI~GG~~~---~~--~~~gIfIs~V~pGGpA~r~GrLqvGDrILaVNG~sl~g~sh~eAV~l 163 (684)
+....|.+.+ ..+|||+|.||.+. +. ...+++|..|.++|||++ | |++||+|++|||.++.++++.+++.+
T Consensus 10 ~~~~~v~l~~--~~~lG~~i~gg~~~~~~p~~~~~~gv~V~~V~~~spA~~-g-L~~GD~I~~vng~~v~~~~~~~~~~~ 85 (103)
T 1n7t_A 10 KQEIRVRVEK--DPELGFSISGGVGGRGNPFRPDDDGIFVTRVQPEGPASK-L-LQPGDKIIQANGYSFINIEHGQAVSL 85 (103)
T ss_dssp CCCEEEEEEC--SSCCCBEEEECTTSSBCSSCSSCCSEECCCBSSSSTTSS-S-CCTTCEEEEETTEECSSCCHHHHHHH
T ss_pred cEEEEEEEcc--CCCccEEEEcccCCCCCccccCCCCEEEEEECCCCchHH-C-CCCCCEEEEECCEECCCCCHHHHHHH
Confidence 3444555554 45999999997642 11 346899999999999999 8 99999999999999999999999999
Q ss_pred HHcCCCEEEEEEEecC
Q psy2533 164 LVRTGPIVTLEIAKQG 179 (684)
Q Consensus 164 Lk~sg~~V~LvV~R~~ 179 (684)
++..+..|.|+|.|..
T Consensus 86 ~~~~g~~v~l~v~R~~ 101 (103)
T 1n7t_A 86 LKTFQNTVELIIVREV 101 (103)
T ss_dssp HHHCCSEEEEEEECCC
T ss_pred hhcCCCeEEEEEEecC
Confidence 9998999999998864
No 97
>2pkt_A PDZ and LIM domain protein 1; PDZ domain, structural genomics, structural genomics consort unknown function; HET: PG4; 1.50A {Homo sapiens} PDB: 2v1w_A*
Probab=99.31 E-value=8e-12 Score=107.20 Aligned_cols=84 Identities=17% Similarity=0.169 Sum_probs=73.6
Q ss_pred EEEEEecCCCcccEEEEeccCCCCCcccEEEEEecCCChhcccCccccCCeeeecCCeecCCCCHHHHHHHHHcCCCEEE
Q psy2533 93 SHSVRDMLRQEAKLSEMSEEGAGQDRLGIYIKSVVKGGAADANGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGPIVT 172 (684)
Q Consensus 93 ~V~v~k~~~~GLGfsI~GG~~~~~~~~gIfIs~V~pGGpA~r~GrLqvGDrILaVNG~sl~g~sh~eAV~lLk~sg~~V~ 172 (684)
...+......+|||++.+|.+.. .+++|..|.++|||+++| |++||+|++|||.++.++.|.+++.+++..+..+.
T Consensus 4 ~~~v~~~~~~~~G~~l~~~~~~~---~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v~ 79 (91)
T 2pkt_A 4 TQQIDLQGPGPWGFRLVGGKDFE---QPLAISRVTPGSKAALAN-LCIGDVITAIDGENTSNMTHLEAQNRIKGCTDNLT 79 (91)
T ss_dssp EEEEEEESSSCCSEEEEEEGGGT---EEEEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHHHTCSSEEE
T ss_pred cEEEEECCCCCCCEEEEccCCCC---CCeEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEE
Confidence 34444456789999999886532 479999999999999999 99999999999999999999999999999889999
Q ss_pred EEEEecCc
Q psy2533 173 LEIAKQGA 180 (684)
Q Consensus 173 LvV~R~~~ 180 (684)
|.|.|...
T Consensus 80 l~v~R~g~ 87 (91)
T 2pkt_A 80 LTVARSEH 87 (91)
T ss_dssp EEEEEECC
T ss_pred EEEEECCc
Confidence 99999764
No 98
>2ejy_A 55 kDa erythrocyte membrane protein; GPC, maguk, PDZ, membrane protein; NMR {Homo sapiens} PDB: 2ev8_A
Probab=99.31 E-value=6.2e-12 Score=111.18 Aligned_cols=83 Identities=13% Similarity=0.325 Sum_probs=74.6
Q ss_pred ceEEEEEecCCCcccEEEEeccCCCCCcccEEEEEecCCChhcccCccccCCeeeecCCeecCCCCHHHHHHHHHcCCCE
Q psy2533 91 MKSHSVRDMLRQEAKLSEMSEEGAGQDRLGIYIKSVVKGGAADANGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGPI 170 (684)
Q Consensus 91 ~~~V~v~k~~~~GLGfsI~GG~~~~~~~~gIfIs~V~pGGpA~r~GrLqvGDrILaVNG~sl~g~sh~eAV~lLk~sg~~ 170 (684)
.+.|.+.|..+.+|||++..+.+ .+++|..|.++|||+++|+|++||+|++|||.++.++++.+++.+|+..+..
T Consensus 13 ~~~v~l~K~~~~~lG~~l~~~~~-----~gv~V~~V~~gspA~~aG~L~~GD~Il~ING~~v~~~~~~~~~~~l~~~~~~ 87 (97)
T 2ejy_A 13 VRLIQFEKVTEEPMGICLKLNEK-----QSCTVARILHGGMIHRQGSLHVGDEILEINGTNVTNHSVDQLQKAMKETKGM 87 (97)
T ss_dssp CEEEEEEECSSSCCSEEEEECTT-----CCEEEEEECSSSHHHHHTCCCTTCEEEEETTBCCCSSCSHHHHHHHHHCCEE
T ss_pred cEEEEEEeCCCCCeeEEEEeCCC-----CCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCe
Confidence 46788889899999999986432 3799999999999999999999999999999999999999999999988888
Q ss_pred EEEEEEec
Q psy2533 171 VTLEIAKQ 178 (684)
Q Consensus 171 V~LvV~R~ 178 (684)
|.|+|.+.
T Consensus 88 v~L~V~~~ 95 (97)
T 2ejy_A 88 ISLKVIPN 95 (97)
T ss_dssp EEEEEECC
T ss_pred EEEEEEEC
Confidence 99988754
No 99
>2v90_A PDZ domain-containing protein 3; membrane, protein-binding; 2.00A {Homo sapiens}
Probab=99.31 E-value=1.1e-11 Score=107.39 Aligned_cols=88 Identities=26% Similarity=0.364 Sum_probs=75.7
Q ss_pred CceEEEEEecCCCcccEEEEeccCCCCCcccEEEEEecCCChhcccCccccCCeeeecCCeecCCCCHHHHHHHHHcCCC
Q psy2533 90 SMKSHSVRDMLRQEAKLSEMSEEGAGQDRLGIYIKSVVKGGAADANGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGP 169 (684)
Q Consensus 90 ~~~~V~v~k~~~~GLGfsI~GG~~~~~~~~gIfIs~V~pGGpA~r~GrLqvGDrILaVNG~sl~g~sh~eAV~lLk~sg~ 169 (684)
..++|.+.+.. .+|||++.+..+.. ...+++|..|.++|||+++| |++||+|++|||.++.++++.+++.+|+..+.
T Consensus 3 ~~r~v~l~k~~-~~~G~~l~~~~~~~-~~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~ 79 (96)
T 2v90_A 3 KPRCLHLEKGP-QGFGFLLREEKGLD-GRPGQFLWEVDPGLPAKKAG-MQAGDRLVAVAGESVEGLGHEETVSRIQGQGS 79 (96)
T ss_dssp CCEEEEEECBT-TBSCEEEEEEECTT-SCEEEEEEEECTTSHHHHTT-CCTTEEEEEETTEECTTCCHHHHHHHHHTTTT
T ss_pred CCEEEEEEeCC-CcccEEEEeccCCC-CCCCeEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCC
Confidence 35677777655 59999999854332 23589999999999999999 99999999999999999999999999998889
Q ss_pred EEEEEEEecCc
Q psy2533 170 IVTLEIAKQGA 180 (684)
Q Consensus 170 ~V~LvV~R~~~ 180 (684)
.|.|+|.|...
T Consensus 80 ~v~l~v~r~~~ 90 (96)
T 2v90_A 80 CVSLTVVDPEA 90 (96)
T ss_dssp EEEEEEECCCT
T ss_pred EEEEEEECCCC
Confidence 99999998764
No 100
>2w4f_A Protein LAP4; structural protein, phosphoprotein, UBL conjugation, leucine-rich repeat, alternative splicing, cytoplasm, circletail, coiled coil; 1.30A {Homo sapiens}
Probab=99.30 E-value=1.4e-11 Score=106.63 Aligned_cols=86 Identities=27% Similarity=0.437 Sum_probs=73.9
Q ss_pred EEEEEecCCCcccEEEEeccCCCC---CcccEEEEEecCCChhcccCccccCCeeeecCCeecCCCCHHHHHHHHHcCCC
Q psy2533 93 SHSVRDMLRQEAKLSEMSEEGAGQ---DRLGIYIKSVVKGGAADANGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGP 169 (684)
Q Consensus 93 ~V~v~k~~~~GLGfsI~GG~~~~~---~~~gIfIs~V~pGGpA~r~GrLqvGDrILaVNG~sl~g~sh~eAV~lLk~sg~ 169 (684)
.+.+.+ ...+|||+|.+|.+... ...+++|..|.++|||+++| |++||+|++|||.++.++++.+++..++..+.
T Consensus 6 ~v~~~~-~~~glG~~i~~g~~~~~~~~~~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~~~~~g~ 83 (97)
T 2w4f_A 6 TLTILR-QTGGLGISIAGGKGSTPYKGDDEGIFISRVSEEGPAARAG-VRVGDKLLEVNGVALQGAEHHEAVEALRGAGT 83 (97)
T ss_dssp EEEEEC-BTTBSSEEEEECTTSCCSBTTBCSEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHTSCS
T ss_pred EEEEEe-CCCceeEEEECCccCCcccCCCCCEEEEEECCCChHHHcC-CCCCCEEEEECCEECCCcCHHHHHHHHhCCCC
Confidence 344444 48899999999866431 34689999999999999999 99999999999999999999999999988899
Q ss_pred EEEEEEEecCc
Q psy2533 170 IVTLEIAKQGA 180 (684)
Q Consensus 170 ~V~LvV~R~~~ 180 (684)
.|.|+|.|...
T Consensus 84 ~v~l~v~R~g~ 94 (97)
T 2w4f_A 84 AVQMRVWRERE 94 (97)
T ss_dssp EEEEEEECCSS
T ss_pred eEEEEEEeCCc
Confidence 99999998753
No 101
>2koj_A Partitioning defective 3 homolog; PDZ domain, structural genomics, alternative splicing, cell cycle, cell division, cell junction, coiled coil; NMR {Mus musculus} PDB: 2ogp_A
Probab=99.30 E-value=2.1e-11 Score=108.29 Aligned_cols=83 Identities=31% Similarity=0.411 Sum_probs=73.0
Q ss_pred ecCCCcccEEEEeccCCCCCcccEEEEEecCCChhcccCccccCCeeeecCCeecCCCCHHHHHHHHHcC--CCEEEEEE
Q psy2533 98 DMLRQEAKLSEMSEEGAGQDRLGIYIKSVVKGGAADANGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRT--GPIVTLEI 175 (684)
Q Consensus 98 k~~~~GLGfsI~GG~~~~~~~~gIfIs~V~pGGpA~r~GrLqvGDrILaVNG~sl~g~sh~eAV~lLk~s--g~~V~LvV 175 (684)
.....+|||+|.++.+...+..+++|..|.++|||+++|+|++||+|++|||.++.++++.+++.+|+.. +..|.|+|
T Consensus 18 ~~~~~glG~~~~~~~~~~~~~~g~~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~g~~v~l~v 97 (111)
T 2koj_A 18 KKGTEGLGFSITSRDVTIGGSAPIYVKNILPRGAAIQDGRLKAGDRLIEVNGVDLAGKSQEEVVSLLRSTKMEGTVSLLV 97 (111)
T ss_dssp ECBTTBTCEEEEECSCSSSSSSCEEEEEECSSSHHHHHCSSCTTCEEEEETTEECTTSCHHHHHHHHHHCCCSSEEEEEE
T ss_pred EECCCccCEEEEeccCCCCCCcCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCeEEEEE
Confidence 3456899999998765433446899999999999999999999999999999999999999999999975 78999999
Q ss_pred EecCc
Q psy2533 176 AKQGA 180 (684)
Q Consensus 176 ~R~~~ 180 (684)
.|...
T Consensus 98 ~R~~~ 102 (111)
T 2koj_A 98 FRQEE 102 (111)
T ss_dssp EECCC
T ss_pred EeCCC
Confidence 98764
No 102
>1n7e_A AMPA receptor interacting protein GRIP; PDZ, protein binding; 1.50A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1n7f_A
Probab=99.30 E-value=1.4e-11 Score=107.13 Aligned_cols=85 Identities=28% Similarity=0.359 Sum_probs=73.1
Q ss_pred eEEEEEecCCCcccEEEEeccCCCCCcccEEEEEecCCChhcccCccccCCeeeecCCeecCCCCHHHHHHHHHcCCCEE
Q psy2533 92 KSHSVRDMLRQEAKLSEMSEEGAGQDRLGIYIKSVVKGGAADANGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGPIV 171 (684)
Q Consensus 92 ~~V~v~k~~~~GLGfsI~GG~~~~~~~~gIfIs~V~pGGpA~r~GrLqvGDrILaVNG~sl~g~sh~eAV~lLk~sg~~V 171 (684)
.+|.+ ++..++|||+|.++.+. ..+++|..|.++|||+++|+|++||+|++|||.++.++++.+++.+|+..+..|
T Consensus 7 ~~v~l-~~~~~~lG~~i~~~~~~---~~~~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~g~~v 82 (97)
T 1n7e_A 7 YTVEL-KRYGGPLGITISGTEEP---FDPIIISSLTKGGLAERTGAIHIGDRILAINSSSLKGKPLSEAIHLLQMAGETV 82 (97)
T ss_dssp EEEEE-ECTTSCCCEEEECCSST---TSCCEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCCHHHHHHHHHTCCSEE
T ss_pred EEEEE-EeCCCCcCEEEEcccCC---CCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeE
Confidence 44555 45677799999976432 247999999999999999999999999999999999999999999999888999
Q ss_pred EEEEEecCc
Q psy2533 172 TLEIAKQGA 180 (684)
Q Consensus 172 ~LvV~R~~~ 180 (684)
.|+|.|...
T Consensus 83 ~l~v~R~~~ 91 (97)
T 1n7e_A 83 TLKIKKQTD 91 (97)
T ss_dssp EEEEECCCC
T ss_pred EEEEEeCCC
Confidence 999988754
No 103
>1wf7_A Enigma homologue protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.30 E-value=7.1e-12 Score=110.24 Aligned_cols=86 Identities=21% Similarity=0.238 Sum_probs=74.7
Q ss_pred CceEEEEEecCCCcccEEEEeccCCCCCcccEEEEEecCCChhcccCccccCCeeeecCCeecCCCCHHHHHHHHHcCCC
Q psy2533 90 SMKSHSVRDMLRQEAKLSEMSEEGAGQDRLGIYIKSVVKGGAADANGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGP 169 (684)
Q Consensus 90 ~~~~V~v~k~~~~GLGfsI~GG~~~~~~~~gIfIs~V~pGGpA~r~GrLqvGDrILaVNG~sl~g~sh~eAV~lLk~sg~ 169 (684)
...+|.+. ...+|||+|.+|.+.. .+++|..|.++|||+++| |++||+|++|||.++.++++.+++.+++..+.
T Consensus 5 ~~~~v~l~--~~~~~G~~l~gg~~~~---~~v~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~~~~~g~ 78 (103)
T 1wf7_A 5 SSGSVSLV--GPAPWGFRLQGGKDFN---MPLTISSLKDGGKASQAH-VRIGDVVLSIDGISAQGMTHLEAQNKIKACTG 78 (103)
T ss_dssp CCEEEEEE--SSSCCSCCEEEETTTT---EEEEECCCCTTCHHHHTT-CCTTCBEEEETTEECSSCCHHHHHHHHHHCSS
T ss_pred CEEEEEEe--CCCccCEEEeccccCC---CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCC
Confidence 34455554 5788999999987643 479999999999999999 99999999999999999999999999998889
Q ss_pred EEEEEEEecCcc
Q psy2533 170 IVTLEIAKQGAI 181 (684)
Q Consensus 170 ~V~LvV~R~~~~ 181 (684)
.+.|+|.|....
T Consensus 79 ~v~l~v~R~g~~ 90 (103)
T 1wf7_A 79 SLNMTLQRASAA 90 (103)
T ss_dssp EEEEEECCCSCC
T ss_pred eEEEEEEeCCCc
Confidence 999999887653
No 104
>2fcf_A Multiple PDZ domain protein; adaptor molecule, protein linker, structural genomics, struc genomics consortium, SGC, structural protein; 1.76A {Homo sapiens} SCOP: b.36.1.1
Probab=99.30 E-value=1e-11 Score=108.68 Aligned_cols=91 Identities=25% Similarity=0.387 Sum_probs=74.9
Q ss_pred CceEEEEEecCCCcccEEEEeccCCCC------CcccEEEEEecCCChhcccCccccCCeeeecCCeecCCCCHHHHHHH
Q psy2533 90 SMKSHSVRDMLRQEAKLSEMSEEGAGQ------DRLGIYIKSVVKGGAADANGRLQAGDQLLKVDGQSLVGITQEKAAEY 163 (684)
Q Consensus 90 ~~~~V~v~k~~~~GLGfsI~GG~~~~~------~~~gIfIs~V~pGGpA~r~GrLqvGDrILaVNG~sl~g~sh~eAV~l 163 (684)
...++.+.+....+|||++.++.+... ...+++|..|.++|||+++|+|++||+|++|||.++.++++.+++.+
T Consensus 4 dp~~v~l~~~~~~~lG~~~~~~~~~~~~~~~~~~~~g~~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~ 83 (103)
T 2fcf_A 4 QPRRVELWREPSKSLGISIVGGRGMGSRLSNGEVMRGIFIKHVLEDSPAGKNGTLKPGDRIVEVDGMDLRDASHEQAVEA 83 (103)
T ss_dssp SCEEEEECCCC-CCCCEEEECCCC-------------EEEEEECSSSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHH
T ss_pred CCEEEEEEeCCCCceeEEEEccCCCCcccccCCCCCCEEEEEeCCCCcHHHcCCCCCCCEEEEECCEECCCCCHHHHHHH
Confidence 346778877777899999998654321 12489999999999999999999999999999999999999999999
Q ss_pred HHcCCCEEEEEEEecCc
Q psy2533 164 LVRTGPIVTLEIAKQGA 180 (684)
Q Consensus 164 Lk~sg~~V~LvV~R~~~ 180 (684)
|+..++.|.|+|.|...
T Consensus 84 l~~~~~~v~l~v~r~~~ 100 (103)
T 2fcf_A 84 IRKAGNPVVFMVQSIIS 100 (103)
T ss_dssp HHTCCSSEEEEEECCCC
T ss_pred HHhCCCcEEEEEEECCC
Confidence 99888899999988653
No 105
>3r68_A Na(+)/H(+) exchange regulatory cofactor NHE-RF3; PDZ domain, adaptor protein, SR-BI, signaling protein; 1.30A {Mus musculus} SCOP: b.36.1.0 PDB: 3r69_A*
Probab=99.29 E-value=9.5e-12 Score=107.21 Aligned_cols=85 Identities=19% Similarity=0.276 Sum_probs=72.7
Q ss_pred CceEEEEEecCCCcccEEEEeccCCCCCcccEEEEEecCCChhcccCccccCCeeeecCCeecCCCCHHHHHHHHHcCCC
Q psy2533 90 SMKSHSVRDMLRQEAKLSEMSEEGAGQDRLGIYIKSVVKGGAADANGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGP 169 (684)
Q Consensus 90 ~~~~V~v~k~~~~GLGfsI~GG~~~~~~~~gIfIs~V~pGGpA~r~GrLqvGDrILaVNG~sl~g~sh~eAV~lLk~sg~ 169 (684)
..+++.+.+ ...+|||.+.++.+. .+++|..|.++|||+++| |++||+|++|||.++.+++|.+++.+|+..++
T Consensus 5 ~~r~v~l~~-~~~~~G~~l~~~~~~----~~~~V~~v~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~ 78 (95)
T 3r68_A 5 QPRVVVIKK-GSNGYGFYLRAGPEQ----KGQIIKDIEPGSPAEAAG-LKNNDLVVAVNGKSVEALDHDGVVEMIRKGGD 78 (95)
T ss_dssp CCEEEEEEC-BTTBCSCEEEEC--C----CSEEEECCCTTSHHHHHT-CCTTEEEEEETTEECTTCCHHHHHHHHHTTTT
T ss_pred CcEEEEEec-CCCcccEEEEecCCC----CCEEEEEECCCCHHHHCC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCC
Confidence 346667765 567999999976543 379999999999999999 99999999999999999999999999999999
Q ss_pred EEEEEEEecCc
Q psy2533 170 IVTLEIAKQGA 180 (684)
Q Consensus 170 ~V~LvV~R~~~ 180 (684)
.+.+++.|...
T Consensus 79 ~~~~~~~r~~~ 89 (95)
T 3r68_A 79 QTTLLVLDKEL 89 (95)
T ss_dssp EEEEEEEECC-
T ss_pred eEEEEEECCcc
Confidence 99998888653
No 106
>3ngh_A PDZ domain-containing protein 1; adaptor protein, SR-BI, signaling protein; 1.80A {Mus musculus} SCOP: b.36.1.0
Probab=99.29 E-value=7.5e-12 Score=110.31 Aligned_cols=86 Identities=20% Similarity=0.283 Sum_probs=77.0
Q ss_pred ceEEEEEecCCCcccEEEEeccCCCCCcccEEEEEecCCChhcccCccccCCeeeecCCeecCCCCHHHHHHHHHcCCCE
Q psy2533 91 MKSHSVRDMLRQEAKLSEMSEEGAGQDRLGIYIKSVVKGGAADANGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGPI 170 (684)
Q Consensus 91 ~~~V~v~k~~~~GLGfsI~GG~~~~~~~~gIfIs~V~pGGpA~r~GrLqvGDrILaVNG~sl~g~sh~eAV~lLk~sg~~ 170 (684)
.+++.+.+.++.+|||.+.++.+. .+++|..|.+||||+++| |++||+|++|||.++.+++|.+++.+|+..+..
T Consensus 2 ~r~v~l~~~~~~~~G~~l~~~~~~----~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~ 76 (106)
T 3ngh_A 2 PRESKLSKQEGQNYGFFLRIEKDT----DGHLIRVIEEGSPAEKAG-LLDGDRVLRINGVFVDKEEHAQVVELVRKSGNS 76 (106)
T ss_dssp CEEEEEECCTTCCCCCEEECCTTC----CSCEEECCCTTSHHHHTT-CCTTCEEEEETTEECTTSCHHHHHHHHHHTTTE
T ss_pred CEEEEEEeCCCCeeCEEEEEEeCC----CCEEEEEeCCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCE
Confidence 467888888889999999976442 378999999999999999 999999999999999999999999999999999
Q ss_pred EEEEEEecCcc
Q psy2533 171 VTLEIAKQGAI 181 (684)
Q Consensus 171 V~LvV~R~~~~ 181 (684)
|.|+|.|....
T Consensus 77 v~l~v~r~~~~ 87 (106)
T 3ngh_A 77 VTLLVLDGDSY 87 (106)
T ss_dssp EEEEEECHHHH
T ss_pred EEEEEEECCee
Confidence 99999987643
No 107
>1v6b_A Harmonin isoform A1; structural genomics, usher syndrome, USH1, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.29 E-value=6.7e-12 Score=113.70 Aligned_cols=86 Identities=19% Similarity=0.316 Sum_probs=72.0
Q ss_pred ceEEEEEecCCCcccEEEEeccCCCCCcccEEEEEecCCChhcccCccccCCeeeecCCeecCCCCHHHHHHHHHcC---
Q psy2533 91 MKSHSVRDMLRQEAKLSEMSEEGAGQDRLGIYIKSVVKGGAADANGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRT--- 167 (684)
Q Consensus 91 ~~~V~v~k~~~~GLGfsI~GG~~~~~~~~gIfIs~V~pGGpA~r~GrLqvGDrILaVNG~sl~g~sh~eAV~lLk~s--- 167 (684)
.+.+.+.+ ..||||+|.||.+... .+++|..|.++|||+++|.|++||+|++|||.++.+++|.+++.+|+..
T Consensus 19 ~~~~~~~~--~~glG~~i~gg~~~~~--~~i~I~~V~~gspA~~aggL~~GD~Il~Ing~~v~~~~~~~~~~~l~~~~~~ 94 (118)
T 1v6b_A 19 VRLLRIKK--EGSLDLALEGGVDSPV--GKVVVSAVYEGGAAERHGGVVKGDEIMAINGKIVTDYTLAEAEAALQKAWNQ 94 (118)
T ss_dssp EEEEEEES--CSCCCCEEEEBTTSSS--CSEEEEECCTTSHHHHHCSSCTTCEEEEESSCBCTTCBHHHHHHHHHHHHHH
T ss_pred EEEEEECC--CCccCEEEEcccCCCC--CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHHhhhc
Confidence 34444433 4599999999876542 3599999999999999955999999999999999999999999999865
Q ss_pred -CCEEEEEEEecCc
Q psy2533 168 -GPIVTLEIAKQGA 180 (684)
Q Consensus 168 -g~~V~LvV~R~~~ 180 (684)
+..|.|+|.|..+
T Consensus 95 ~g~~v~l~v~r~~~ 108 (118)
T 1v6b_A 95 GGDWIDLVVAVCPP 108 (118)
T ss_dssp TCSEEEEEEECCCS
T ss_pred CCCeEEEEEEeCCc
Confidence 7899999999654
No 108
>2vsp_A PDZ domain-containing protein 1; membrane, cytoplasm, phosphoprotein, transport protein, CAsp; 2.60A {Homo sapiens} PDB: 2eej_A
Probab=99.28 E-value=3.4e-12 Score=109.72 Aligned_cols=84 Identities=27% Similarity=0.348 Sum_probs=71.0
Q ss_pred ceEEEEEecCCCcccEEEEeccCCCCCcccEEEEEecCCChhcccCccccCCeeeecCCeecCCCCHHHHHHHHHcCCCE
Q psy2533 91 MKSHSVRDMLRQEAKLSEMSEEGAGQDRLGIYIKSVVKGGAADANGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGPI 170 (684)
Q Consensus 91 ~~~V~v~k~~~~GLGfsI~GG~~~~~~~~gIfIs~V~pGGpA~r~GrLqvGDrILaVNG~sl~g~sh~eAV~lLk~sg~~ 170 (684)
.++|.+.|... +|||++.++.+. .+++|..|.++|||+++| |++||+|++|||.++.++++.+++.+|+..+..
T Consensus 4 pr~v~l~k~~~-~~G~~l~~~~~~----~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~ 77 (91)
T 2vsp_A 4 PKLCRLAKGEN-GYGFHLNAIRGL----PGSFIKEVQKGGPADLAG-LEDEDVIIEVNGVNVLDEPYEKVVDRIQSSGKN 77 (91)
T ss_dssp EEEEEEECBTT-BTSCCCBCCTTC----SCCBC-CCCTTSHHHHTT-CCTTCEEEEETTEECTTSCHHHHHHHHTTSCSE
T ss_pred cEEEEEEeCCC-cccEEEEeccCC----CCeEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCE
Confidence 46777777655 899999875442 378999999999999999 999999999999999999999999999988889
Q ss_pred EEEEEEecCc
Q psy2533 171 VTLEIAKQGA 180 (684)
Q Consensus 171 V~LvV~R~~~ 180 (684)
|.|+|.|...
T Consensus 78 v~l~v~r~~~ 87 (91)
T 2vsp_A 78 VTLLVCGKKA 87 (91)
T ss_dssp EEEEEEC---
T ss_pred EEEEEEeCCc
Confidence 9999998753
No 109
>2iwq_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP- 1, membrane, HOST- interaction, structural genomics consortium, synaptosome, T junction; 1.80A {Homo sapiens}
Probab=99.27 E-value=1.4e-11 Score=112.85 Aligned_cols=90 Identities=26% Similarity=0.390 Sum_probs=76.8
Q ss_pred ceEEEEEecCCCcccEEEEeccCCCC------CcccEEEEEecCCChhcccCccccCCeeeecCCeecCCCCHHHHHHHH
Q psy2533 91 MKSHSVRDMLRQEAKLSEMSEEGAGQ------DRLGIYIKSVVKGGAADANGRLQAGDQLLKVDGQSLVGITQEKAAEYL 164 (684)
Q Consensus 91 ~~~V~v~k~~~~GLGfsI~GG~~~~~------~~~gIfIs~V~pGGpA~r~GrLqvGDrILaVNG~sl~g~sh~eAV~lL 164 (684)
.+.+.+.+....+|||++.++.+... ...|++|..|.++|||+++|+|++||+|++|||.++.++++.+++.+|
T Consensus 25 p~~v~l~k~~~~~lGi~v~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l 104 (123)
T 2iwq_A 25 PRRVELWREPSKSLGISIVGGRGMGSRLSNGEVMRGIFIKHVLEDSPAGKNGTLKPGDRIVEVDGMDLRDASHEQAVEAI 104 (123)
T ss_dssp CEEEEECCCTTSCCSEEEEECC---------CCCCSEEEEEECSSSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHH
T ss_pred CEEEEEEecCCCCccEEEEeccCccccccccCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 46778877777899999998654321 135899999999999999999999999999999999999999999999
Q ss_pred HcCCCEEEEEEEecCc
Q psy2533 165 VRTGPIVTLEIAKQGA 180 (684)
Q Consensus 165 k~sg~~V~LvV~R~~~ 180 (684)
+..++.|.|+|.|..+
T Consensus 105 ~~~~~~v~l~v~r~~~ 120 (123)
T 2iwq_A 105 RKAGNPVVFMVQSIIS 120 (123)
T ss_dssp HHCCSSEEEEEECCCC
T ss_pred HcCCCeEEEEEEECCc
Confidence 9988899999988653
No 110
>2eeg_A PDZ and LIM domain protein 4; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.26 E-value=8.8e-12 Score=107.89 Aligned_cols=82 Identities=17% Similarity=0.139 Sum_probs=71.8
Q ss_pred eEEEEEecCCCcccEEEEeccCCCCCcccEEEEEecCCChhcccCccccCCeeeecCCeecCCCCHHHHHHHHHcCCCEE
Q psy2533 92 KSHSVRDMLRQEAKLSEMSEEGAGQDRLGIYIKSVVKGGAADANGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGPIV 171 (684)
Q Consensus 92 ~~V~v~k~~~~GLGfsI~GG~~~~~~~~gIfIs~V~pGGpA~r~GrLqvGDrILaVNG~sl~g~sh~eAV~lLk~sg~~V 171 (684)
..|.+ ....+|||.+.+|.+.. .+++|..|.+++||+++| |++||+|++|||.++.++++.+++.+++..+..+
T Consensus 10 ~~v~l--~~~~~~G~~l~gg~~~~---~~v~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~~~~~g~~v 83 (94)
T 2eeg_A 10 HSVTL--RGPSPWGFRLVGGRDFS---APLTISRVHAGSKAALAA-LCPGDLIQAINGESTELMTHLEAQNRIKGCHDHL 83 (94)
T ss_dssp EEEEE--CCSSCCSCCEECCTTTT---SCCEECCCCSSSHHHHTT-CCTTCEEEEETTEETTTCCHHHHHHHHHTCCSCE
T ss_pred EEEEE--eCCCccCEEEECccCCC---CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeE
Confidence 34444 55679999999987643 479999999999999999 9999999999999999999999999999888899
Q ss_pred EEEEEecC
Q psy2533 172 TLEIAKQG 179 (684)
Q Consensus 172 ~LvV~R~~ 179 (684)
.|+|.|..
T Consensus 84 ~l~v~R~g 91 (94)
T 2eeg_A 84 TLSVSSGP 91 (94)
T ss_dssp EEEEECCS
T ss_pred EEEEEeCC
Confidence 99998865
No 111
>1vb7_A PDZ and LIM domain 2; PDZ domain PDZ-LIM protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.26 E-value=6.4e-12 Score=108.78 Aligned_cols=86 Identities=16% Similarity=0.225 Sum_probs=76.4
Q ss_pred ceEEEEEecCCCcccEEEEeccCCCCCcccEEEEEecCCChhcccCccccCCeeeecCCeecCCCCHHHHHHHHHcCCCE
Q psy2533 91 MKSHSVRDMLRQEAKLSEMSEEGAGQDRLGIYIKSVVKGGAADANGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGPI 170 (684)
Q Consensus 91 ~~~V~v~k~~~~GLGfsI~GG~~~~~~~~gIfIs~V~pGGpA~r~GrLqvGDrILaVNG~sl~g~sh~eAV~lLk~sg~~ 170 (684)
..++.+.++...+|||+|.+|.+. ..+++|..|.+++||+++| |++||+|++|||.++.+++|.+++.+|+..+..
T Consensus 5 ~~~~~~~~~~~~~lG~~l~~g~~~---~~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~ 80 (94)
T 1vb7_A 5 SSGLTVDVAGPAPWGFRISGGRDF---HTPIIVTKVTERGKAEAAD-LRPGDIIVAINGQSAENMLHAEAQSKIRQSASP 80 (94)
T ss_dssp CCCEEEEECSSSCCSBCCEEETTT---TEEEECCCBCTTSSHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHTCCSS
T ss_pred cEEEEEEecCCCCccEEEecccCC---CCCeEEEEECCCCHHHHCC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCc
Confidence 455777777888999999988653 2589999999999999999 999999999999999999999999999988888
Q ss_pred EEEEEEecCc
Q psy2533 171 VTLEIAKQGA 180 (684)
Q Consensus 171 V~LvV~R~~~ 180 (684)
+.|+|.|...
T Consensus 81 v~l~v~R~g~ 90 (94)
T 1vb7_A 81 LRLQLDRSSG 90 (94)
T ss_dssp EEEEEECCCC
T ss_pred EEEEEEECCc
Confidence 9999998753
No 112
>3k1r_A Harmonin; protein-protein complex, alternative splicing, coiled coil, deafness, hearing, non-syndromic deafness, polymorphism; 2.30A {Homo sapiens} PDB: 2kbq_A 2kbr_A 2lsr_A
Probab=99.26 E-value=1.6e-11 Score=119.88 Aligned_cols=88 Identities=25% Similarity=0.444 Sum_probs=79.1
Q ss_pred CCceEEEEEecCCCcccEEEEeccCCCCCcccEEEEEecCCChhcccCccccCCeeeecCCeecCCCCHHHHHHHHHcCC
Q psy2533 89 SSMKSHSVRDMLRQEAKLSEMSEEGAGQDRLGIYIKSVVKGGAADANGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTG 168 (684)
Q Consensus 89 s~~~~V~v~k~~~~GLGfsI~GG~~~~~~~~gIfIs~V~pGGpA~r~GrLqvGDrILaVNG~sl~g~sh~eAV~lLk~sg 168 (684)
...+.|.+.+.+..+|||+|.||.+. ..+++|..|.+||||+++| |++||+|++|||.++.++++.+++.+|+. +
T Consensus 83 ~~~~~v~l~k~~~~~lG~~i~~~~~~---~~~~~V~~V~~gspA~~aG-L~~GD~Il~vng~~v~~~~~~~~~~~l~~-~ 157 (192)
T 3k1r_A 83 RKLKEVRLDRLHPEGLGLSVRGGLEF---GCGLFISHLIKGGQADSVG-LQVGDEIVRINGYSISSCTHEEVINLIRT-E 157 (192)
T ss_dssp SSCEEEEEETTSTTCCCEEEEEEGGG---TEEEEEEEECTTSHHHHTT-CCTTEEEEEETTEECTTCCHHHHHHHHTS-S
T ss_pred CceEEEEEEeCCCCceeEEEEccccc---CCCEEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHcC-C
Confidence 45678889888888999999988653 2589999999999999999 99999999999999999999999999999 8
Q ss_pred CEEEEEEEecCcc
Q psy2533 169 PIVTLEIAKQGAI 181 (684)
Q Consensus 169 ~~V~LvV~R~~~~ 181 (684)
..|.|+|.|.+..
T Consensus 158 ~~v~l~v~r~g~~ 170 (192)
T 3k1r_A 158 KTVSIKVRHIGLI 170 (192)
T ss_dssp SEEEEEEEECCEE
T ss_pred CeEEEEEEECCcc
Confidence 9999999998753
No 113
>1tp5_A Presynaptic density protein 95; PDZ-peptide ligand complex, peptide binding protein; 1.54A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1tp3_A 1tq3_A 1be9_A 1bfe_A
Probab=99.25 E-value=2.5e-11 Score=109.22 Aligned_cols=89 Identities=27% Similarity=0.370 Sum_probs=77.4
Q ss_pred CCCceEEEEEecCCCcccEEEEeccCCCCCcccEEEEEecCCChhcccCccccCCeeeecCCeecCCCCHHHHHHHHHcC
Q psy2533 88 DSSMKSHSVRDMLRQEAKLSEMSEEGAGQDRLGIYIKSVVKGGAADANGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRT 167 (684)
Q Consensus 88 ~s~~~~V~v~k~~~~GLGfsI~GG~~~~~~~~gIfIs~V~pGGpA~r~GrLqvGDrILaVNG~sl~g~sh~eAV~lLk~s 167 (684)
....++|.+.+. ..||||+|.++.+ ..+++|..|.++|||+++|+|++||+|++|||.++.++++.+++.+++..
T Consensus 12 ~~~~~~v~l~k~-~~glG~~l~~~~~----~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~ 86 (119)
T 1tp5_A 12 PREPRRIVIHRG-STGLGFNIVGGED----GEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNA 86 (119)
T ss_dssp CCSCEEEEEECT-TSCCCEEEEECGG----GCCEEEEEECTTSHHHHHSCCCTTEEEEEETTEECTTCCHHHHHHHHHTS
T ss_pred CCccEEEEEEEC-CCCccEEEecCCC----CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 356677877764 4679999998753 24799999999999999999999999999999999999999999999999
Q ss_pred CCEEEEEEEecCcc
Q psy2533 168 GPIVTLEIAKQGAI 181 (684)
Q Consensus 168 g~~V~LvV~R~~~~ 181 (684)
+..+.|+|.|....
T Consensus 87 ~~~v~l~v~r~~~~ 100 (119)
T 1tp5_A 87 GQTVTIIAQYKPEE 100 (119)
T ss_dssp CSEEEEEEEECHHH
T ss_pred CCeEEEEEEECCch
Confidence 99999999987643
No 114
>3khf_A Microtubule-associated serine/threonine-protein kinase 3; MAST3, microtubule associated serine/threonine kinase 3, PDZ domain, structural genomics; 1.20A {Homo sapiens} PDB: 2w7r_A 2kqf_A 2kyl_A 3ps4_A
Probab=99.25 E-value=1.8e-11 Score=106.61 Aligned_cols=85 Identities=20% Similarity=0.274 Sum_probs=71.6
Q ss_pred EEEEecCCCcccEEEEeccCCC----CCcccEEEEEecCCChhcccCccccCCeeeecCCeecCCCCHHHHHHHHHcCCC
Q psy2533 94 HSVRDMLRQEAKLSEMSEEGAG----QDRLGIYIKSVVKGGAADANGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGP 169 (684)
Q Consensus 94 V~v~k~~~~GLGfsI~GG~~~~----~~~~gIfIs~V~pGGpA~r~GrLqvGDrILaVNG~sl~g~sh~eAV~lLk~sg~ 169 (684)
+.+ ++.+.+|||++.++.... ....|++|..|.++|||+++| |++||+|++|||.++.++++.+++.+|+..+.
T Consensus 6 v~l-~~~~~~~Gf~l~~~~~~~~~~~~~~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~ 83 (99)
T 3khf_A 6 IVI-HSSGKKYGFSLRAIRVYMGDSDVYTVHHVVWSVEDGSPAQEAG-LRAGDLITHINGESVLGLVHMDVVELLLKSGN 83 (99)
T ss_dssp EEE-EC-CCCCCEEEEEEEEESSSSSCEEEEEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHHSCS
T ss_pred EEE-EeCCCCCcEEEEecccccCccccccCCeEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHhcCCC
Confidence 444 457889999999764321 112378999999999999999 99999999999999999999999999999999
Q ss_pred EEEEEEEecCc
Q psy2533 170 IVTLEIAKQGA 180 (684)
Q Consensus 170 ~V~LvV~R~~~ 180 (684)
.+.|+|.|...
T Consensus 84 ~v~l~v~r~~~ 94 (99)
T 3khf_A 84 KISLRTTALEN 94 (99)
T ss_dssp EEEEEEECSCS
T ss_pred EEEEEEEECCC
Confidence 99999998653
No 115
>2eeh_A PDZ domain-containing protein 7; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.25 E-value=2.9e-11 Score=105.79 Aligned_cols=87 Identities=24% Similarity=0.358 Sum_probs=75.8
Q ss_pred CCceEEEEEecCCCcccEEEEeccCCCCCcccEEEEEecCCChhcccCccccCCeeeecCCeecCCCCHHHHHHHHHcCC
Q psy2533 89 SSMKSHSVRDMLRQEAKLSEMSEEGAGQDRLGIYIKSVVKGGAADANGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTG 168 (684)
Q Consensus 89 s~~~~V~v~k~~~~GLGfsI~GG~~~~~~~~gIfIs~V~pGGpA~r~GrLqvGDrILaVNG~sl~g~sh~eAV~lLk~sg 168 (684)
...+.|.+.+.....|||++.++.+. ..+++|..|.+++||+++| |++||+|++|||.++.++++.+++.+++. +
T Consensus 9 ~~~~~v~l~~~~~~~lG~~~~~~~~~---~~gv~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~~~~-~ 83 (100)
T 2eeh_A 9 DIIHSVRVEKSPAGRLGFSVRGGSEH---GLGIFVSKVEEGSSAERAG-LCVGDKITEVNGLSLESTTMGSAVKVLTS-S 83 (100)
T ss_dssp CEECCEEECCCSSSSCSEEEECCTTT---TCCEEEEEECTTSHHHHHT-CCSSCEEEEETTEECSSCCHHHHHHHHHS-C
T ss_pred CeEEEEEEEECCCCCccEEEEccccC---CCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHhhcC-C
Confidence 34666788777777899999986442 2489999999999999999 99999999999999999999999999988 7
Q ss_pred CEEEEEEEecCc
Q psy2533 169 PIVTLEIAKQGA 180 (684)
Q Consensus 169 ~~V~LvV~R~~~ 180 (684)
..|.|+|.|...
T Consensus 84 ~~v~l~v~R~g~ 95 (100)
T 2eeh_A 84 SRLHMMVRRMGS 95 (100)
T ss_dssp SSEEEEEEECSC
T ss_pred CEEEEEEEECCc
Confidence 889999999764
No 116
>2e7k_A Maguk P55 subfamily member 2; PDZ domain, MPP2 protein, discs large homolog 2, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.25 E-value=9.5e-12 Score=107.67 Aligned_cols=83 Identities=23% Similarity=0.300 Sum_probs=73.3
Q ss_pred CceEEEEEecCCCcccEEEEeccCCCCCcccEEEEEecCCChhcccCccccCCeeeecCCeecCCCCHHHHHHHHHcCCC
Q psy2533 90 SMKSHSVRDMLRQEAKLSEMSEEGAGQDRLGIYIKSVVKGGAADANGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGP 169 (684)
Q Consensus 90 ~~~~V~v~k~~~~GLGfsI~GG~~~~~~~~gIfIs~V~pGGpA~r~GrLqvGDrILaVNG~sl~g~sh~eAV~lLk~sg~ 169 (684)
..++|.+.|....+|||+|.+. ..+++|..|.++|||+++|.|++||+|++|||.++ +.++.+++.+|+..++
T Consensus 6 ~~r~v~l~k~~~~~lG~~i~~~------~~~v~V~~V~~~spA~~ag~L~~GD~I~~ing~~v-~~~~~~~~~~l~~~~~ 78 (91)
T 2e7k_A 6 SGRMVGIRKTAGEHLGVTFRVE------GGELVIARILHGGMVAQQGLLHVGDIIKEVNGQPV-GSDPRALQELLRNASG 78 (91)
T ss_dssp CSCBCCBCCCTTCCCCEEEEES------SSSEEEEEECSSSHHHHHCCCCTTCEEEEETTEEC-TTCHHHHHHHHHTCCS
T ss_pred CcEEEEEEECCCCcEeEEEEec------CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEEC-CCCHHHHHHHHHcCCC
Confidence 4566777777889999999872 24799999999999999988999999999999999 9999999999998888
Q ss_pred EEEEEEEecC
Q psy2533 170 IVTLEIAKQG 179 (684)
Q Consensus 170 ~V~LvV~R~~ 179 (684)
.|.|+|.|..
T Consensus 79 ~v~l~v~~~~ 88 (91)
T 2e7k_A 79 SVILKILSGP 88 (91)
T ss_dssp SBCEEEECCS
T ss_pred eEEEEEEECC
Confidence 8999998753
No 117
>2kom_A Partitioning defective 3 homolog; PAR-3B, PDZ domain, PSI, structural genomics, alternative splicing, cell cycle, cell division, cell junction; NMR {Homo sapiens}
Probab=99.25 E-value=5e-11 Score=108.44 Aligned_cols=83 Identities=33% Similarity=0.416 Sum_probs=72.3
Q ss_pred EecCCCcccEEEEeccCCCCCcccEEEEEecCCChhcccCccccCCeeeecCCeecCCCCHHHHHHHHHcC--CCEEEEE
Q psy2533 97 RDMLRQEAKLSEMSEEGAGQDRLGIYIKSVVKGGAADANGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRT--GPIVTLE 174 (684)
Q Consensus 97 ~k~~~~GLGfsI~GG~~~~~~~~gIfIs~V~pGGpA~r~GrLqvGDrILaVNG~sl~g~sh~eAV~lLk~s--g~~V~Lv 174 (684)
......+|||+|.++.+...+..+++|..|.++|||+++|+|++||+|++|||.++.++++.+++.+|+.. +..|.|+
T Consensus 36 l~~~~~~lG~~l~~~~~~~~g~~gv~V~~V~~gspA~~aG~L~~GD~Il~Ing~~v~~~~~~~~~~~l~~~~~g~~v~l~ 115 (121)
T 2kom_A 36 LKKGTEGLGFSITSRDVTIGGSAPIYVKNILPRGAAIQDGRLKAGDRLIEVNGVDLVGKSQEEVVSLLRSTKMEGTVSLL 115 (121)
T ss_dssp EECCTTCCCEEEECCCCSSSSSCCEEEEEECTTSHHHHHTCCCSSSEEEEETTEECTTSCHHHHHHHHHHCCSSCEEEEE
T ss_pred EEcCCCcEeEEEEeccCCcCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCCEEEEE
Confidence 44567899999998765433346899999999999999999999999999999999999999999999975 7889999
Q ss_pred EEecC
Q psy2533 175 IAKQG 179 (684)
Q Consensus 175 V~R~~ 179 (684)
|.|..
T Consensus 116 v~R~g 120 (121)
T 2kom_A 116 VFRQE 120 (121)
T ss_dssp EEECC
T ss_pred EEeCC
Confidence 98864
No 118
>2gzv_A PRKCA-binding protein; protein kinase C, PDZ domain, structural genomics, structura genomics consortium, SGC, signaling protein; 1.12A {Homo sapiens} PDB: 2pku_A
Probab=99.24 E-value=3.4e-11 Score=108.65 Aligned_cols=87 Identities=21% Similarity=0.223 Sum_probs=76.2
Q ss_pred CCceEEEEEecCCCcccEEEEeccCCCCCcccEEEEEecCCChhcccCccccCCeeeecCCeecCCCCHHHHHHHHHcCC
Q psy2533 89 SSMKSHSVRDMLRQEAKLSEMSEEGAGQDRLGIYIKSVVKGGAADANGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTG 168 (684)
Q Consensus 89 s~~~~V~v~k~~~~GLGfsI~GG~~~~~~~~gIfIs~V~pGGpA~r~GrLqvGDrILaVNG~sl~g~sh~eAV~lLk~sg 168 (684)
...++|.+.+...++|||++.+|.+.. .+++|..|.++|||+++|+|++||+|++|||.++.+.++.+++.+|+..+
T Consensus 23 ~~~~~V~l~~~~~~~lG~~l~~~~~~~---~~~~V~~V~~gspA~~aG~L~~GD~I~~Ing~~v~~~~~~~~~~~l~~~~ 99 (114)
T 2gzv_A 23 MVPGKVTLQKDAQNLIGISIGGGAQYC---PCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVK 99 (114)
T ss_dssp CCCEEEEEECCTTSCCSEEEEECCC-----CCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHCC
T ss_pred CCCEEEEEEECCCCcEeEEEEeCCCCC---CCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 356788888888888999999875532 47999999999999999999999999999999999999999999999888
Q ss_pred CEEEEEEEec
Q psy2533 169 PIVTLEIAKQ 178 (684)
Q Consensus 169 ~~V~LvV~R~ 178 (684)
+.|.|+|.+.
T Consensus 100 ~~v~l~v~~~ 109 (114)
T 2gzv_A 100 GEVTIHYNKL 109 (114)
T ss_dssp SEEEEEEECC
T ss_pred CeEEEEEEec
Confidence 8899988654
No 119
>1v5q_A GRIP1 homolog, glutamate receptor interacting protein 1A-L homolog; PDZ domain, cellular signaling, structural genomics; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.24 E-value=2.2e-11 Score=110.59 Aligned_cols=92 Identities=21% Similarity=0.126 Sum_probs=77.9
Q ss_pred CCceEEEEEecCCCcccEEEEeccCCC-CCcccEEEEEecCCChhcccCccccCCeeeecCCeecCCCCHHHHHHHHHcC
Q psy2533 89 SSMKSHSVRDMLRQEAKLSEMSEEGAG-QDRLGIYIKSVVKGGAADANGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRT 167 (684)
Q Consensus 89 s~~~~V~v~k~~~~GLGfsI~GG~~~~-~~~~gIfIs~V~pGGpA~r~GrLqvGDrILaVNG~sl~g~sh~eAV~lLk~s 167 (684)
...++|.+.+....+|||+|.++.... ....+++|..|.+++||+++|+|++||+|++|||.++.++++.+++.+|+..
T Consensus 14 ~~~~~v~l~k~~~~glG~~l~~~~~~~~~~~~~~~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~~~ 93 (122)
T 1v5q_A 14 TETTEVVLTADPVTGFGIQLQGSVFATETLSSPPLISYIEADSPAERCGVLQIGDRVMAINGIPTEDSTFEEANQLLRDS 93 (122)
T ss_dssp EEEEEEEECCCSSSSSCEEEECCSCCSSSCSSCCEEEEECTTSHHHHSCCCCTTCCEEEETTEESSSSCHHHHHHHHHHH
T ss_pred ceeEEEEEEeCCCCccCEEEecccccCCcCCCCcEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence 455667777777799999999873221 1235799999999999999999999999999999999999999999999876
Q ss_pred --CCEEEEEEEecCc
Q psy2533 168 --GPIVTLEIAKQGA 180 (684)
Q Consensus 168 --g~~V~LvV~R~~~ 180 (684)
+..|.|+|.|...
T Consensus 94 ~~g~~v~l~v~R~~~ 108 (122)
T 1v5q_A 94 SITSKVTLEIEFDVA 108 (122)
T ss_dssp TTTTCEEEEEEEECC
T ss_pred CCCCeEEEEEEECCc
Confidence 6789999999764
No 120
>2eei_A PDZ domain-containing protein 1; regulatory factor, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.24 E-value=1.3e-11 Score=108.86 Aligned_cols=86 Identities=19% Similarity=0.334 Sum_probs=75.7
Q ss_pred CCceEEEEEecCCCcccEEEEeccCCCCCcccEEEEEecCCChhcccCccccCCeeeecCCeecCCCCHHHHHHHHHcCC
Q psy2533 89 SSMKSHSVRDMLRQEAKLSEMSEEGAGQDRLGIYIKSVVKGGAADANGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTG 168 (684)
Q Consensus 89 s~~~~V~v~k~~~~GLGfsI~GG~~~~~~~~gIfIs~V~pGGpA~r~GrLqvGDrILaVNG~sl~g~sh~eAV~lLk~sg 168 (684)
...++|.+.| ...+|||+|.++.+ ..+++|..|.++|||+++| |++||+|++|||.++.++++.+++.+++..+
T Consensus 7 ~~~r~v~l~k-~~~~~G~~l~~~~~----~~g~~V~~V~~~spA~~aG-l~~GD~I~~vng~~v~~~~~~~~~~~~~~~~ 80 (106)
T 2eei_A 7 GQPRLCYLVK-EGGSYGFSLKTVQG----KKGVYMTDITPQGVAMRAG-VLADDHLIEVNGENVEDASHEEVVEKVKKSG 80 (106)
T ss_dssp SSSEEEEEEC-CSSSCSCCEECCSS----CCSCEECCCCTTSHHHHHT-CCSSEEEEEETTEECTTCCHHHHHHHHHHHC
T ss_pred CCCEEEEEEE-CCCCCCEEEEeccC----CCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCC
Confidence 4567788877 68899999987643 3479999999999999999 9999999999999999999999999999888
Q ss_pred CEEEEEEEecCc
Q psy2533 169 PIVTLEIAKQGA 180 (684)
Q Consensus 169 ~~V~LvV~R~~~ 180 (684)
..+.|+|.|...
T Consensus 81 ~~v~l~v~r~~~ 92 (106)
T 2eei_A 81 SRVMFLLVDKET 92 (106)
T ss_dssp SEEEEEECCTTT
T ss_pred CeEEEEEEcCch
Confidence 899999988754
No 121
>2d90_A PDZ domain containing protein 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=99.23 E-value=2.7e-11 Score=106.15 Aligned_cols=85 Identities=21% Similarity=0.300 Sum_probs=73.9
Q ss_pred CceEEEEEecCCCcccEEEEeccCCCCCcccEEEEEecCCChhcccCccccCCeeeecCCeecCCCCHHHHHHHHHcCCC
Q psy2533 90 SMKSHSVRDMLRQEAKLSEMSEEGAGQDRLGIYIKSVVKGGAADANGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGP 169 (684)
Q Consensus 90 ~~~~V~v~k~~~~GLGfsI~GG~~~~~~~~gIfIs~V~pGGpA~r~GrLqvGDrILaVNG~sl~g~sh~eAV~lLk~sg~ 169 (684)
..++|.+.+ ...+|||++.++.+ ..+++|..|.++|||+++| |++||+|++|||.++.++++.+++.+|+..+.
T Consensus 6 ~~r~v~l~k-~~~g~G~~l~~~~~----~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~ 79 (102)
T 2d90_A 6 SGRVVVIKK-GSNGYGFYLRAGPE----QKGQIIKDIEPGSPAEAAG-LKNNDLVVAVNGKSVEALDHDGVVEMIRKGGD 79 (102)
T ss_dssp SSEEEEEEC-CSSSSSCEEEECSS----SSSEEEECCCTTSTTTTTT-CCTTCEEEEESSCBCTTSCHHHHHHHHHHSTT
T ss_pred CCEEEEEee-CCCCccEEEEeecC----CCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCC
Confidence 456777766 55699999997543 2479999999999999999 99999999999999999999999999998899
Q ss_pred EEEEEEEecCc
Q psy2533 170 IVTLEIAKQGA 180 (684)
Q Consensus 170 ~V~LvV~R~~~ 180 (684)
.|.|+|.|...
T Consensus 80 ~v~l~v~r~~~ 90 (102)
T 2d90_A 80 QTTLLVLDKEA 90 (102)
T ss_dssp EEEEEECSTTC
T ss_pred EEEEEEEECCC
Confidence 99999987653
No 122
>3sfj_A TAX1-binding protein 3; PDZ:peptide complex, signaling protein-inhibitor complex; 1.24A {Homo sapiens} PDB: 3dj3_A
Probab=99.23 E-value=3.2e-11 Score=105.75 Aligned_cols=86 Identities=24% Similarity=0.426 Sum_probs=70.9
Q ss_pred eEEEEEec---CCCcccEEEEeccCCC---------CCcccEEEEEecCCChhcccCccccCCeeeecCCeecCCCCHHH
Q psy2533 92 KSHSVRDM---LRQEAKLSEMSEEGAG---------QDRLGIYIKSVVKGGAADANGRLQAGDQLLKVDGQSLVGITQEK 159 (684)
Q Consensus 92 ~~V~v~k~---~~~GLGfsI~GG~~~~---------~~~~gIfIs~V~pGGpA~r~GrLqvGDrILaVNG~sl~g~sh~e 159 (684)
..+.+.+. +..+|||++.||.+.. ....|++|..|.++|||+++| |++||+|++|||.++.+++|.+
T Consensus 6 ~~i~~~~~~~~~~~~lG~~i~g~~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~ 84 (104)
T 3sfj_A 6 QRVEIHKLRQGENLILGFSIGGGIDQDPSQNPFSEDKTDKGIYVTRVSEGGPAEIAG-LQIGDKIMQVNGWDMTMVTHDQ 84 (104)
T ss_dssp EEEEEECEEETTEEECSEEEEECTTSCGGGCSSCSSTTCCSEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHH
T ss_pred EEEEEEEccCCCCCcccEEEECccccCccccccccCCCCCCEEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHH
Confidence 34445443 3347999999887642 234689999999999999999 9999999999999999999999
Q ss_pred HHHHHHcC-CCEEEEEEEec
Q psy2533 160 AAEYLVRT-GPIVTLEIAKQ 178 (684)
Q Consensus 160 AV~lLk~s-g~~V~LvV~R~ 178 (684)
++.+|+.. +..|.|+|.|+
T Consensus 85 ~~~~l~~~~g~~v~l~v~R~ 104 (104)
T 3sfj_A 85 ARKRLTKRSEEVVRLLVTRQ 104 (104)
T ss_dssp HHHHHTCTTCSEEEEEEEEC
T ss_pred HHHHHHhCCCCEEEEEEEcC
Confidence 99999864 67899999874
No 123
>2iwn_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP- 1, HOST-virus interaction, structural genomics consortium, synaptosome, tight junction; 1.35A {Homo sapiens}
Probab=99.23 E-value=3.7e-11 Score=103.32 Aligned_cols=82 Identities=34% Similarity=0.552 Sum_probs=70.7
Q ss_pred ecCCCcccEEEEeccCCCC-CcccEEEEEecCCChhcccCccccCCeeeecCCeecCCCCHHHHHHHHHcCCCEEEEEEE
Q psy2533 98 DMLRQEAKLSEMSEEGAGQ-DRLGIYIKSVVKGGAADANGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGPIVTLEIA 176 (684)
Q Consensus 98 k~~~~GLGfsI~GG~~~~~-~~~gIfIs~V~pGGpA~r~GrLqvGDrILaVNG~sl~g~sh~eAV~lLk~sg~~V~LvV~ 176 (684)
++...+|||++.++.+... ...+++|..|.++|||+++|+|++||+|++|||.++.++++.+++.+++..+..|.|+|.
T Consensus 11 ~~~~~~lG~~i~~~~~~~~~~~~~~~V~~v~~~s~A~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~l~v~ 90 (97)
T 2iwn_A 11 TKNVQGLGITIAGYIGDKKLEPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLM 90 (97)
T ss_dssp ECBTTBSCEEEECCCCC----CCCCEEEEECTTCHHHHHCCCCTTCEEEEETTEECTTSCHHHHHHHHHTCCSEEEEEEE
T ss_pred ecCCCCCcEEEEccCCCCCCCCCCEEEEEeCCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEE
Confidence 4567889999998754221 235899999999999999999999999999999999999999999999988899999998
Q ss_pred ecC
Q psy2533 177 KQG 179 (684)
Q Consensus 177 R~~ 179 (684)
|..
T Consensus 91 r~g 93 (97)
T 2iwn_A 91 RRG 93 (97)
T ss_dssp EEE
T ss_pred eCC
Confidence 864
No 124
>2dm8_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.23 E-value=2.6e-11 Score=108.53 Aligned_cols=88 Identities=31% Similarity=0.312 Sum_probs=75.7
Q ss_pred ceEEEEEecCCCcccEEEEeccCCCCCcccEEEEEecCCChhcccCccccCCeeeecCCeecCCCCHHHHHHHHHcCCCE
Q psy2533 91 MKSHSVRDMLRQEAKLSEMSEEGAGQDRLGIYIKSVVKGGAADANGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGPI 170 (684)
Q Consensus 91 ~~~V~v~k~~~~GLGfsI~GG~~~~~~~~gIfIs~V~pGGpA~r~GrLqvGDrILaVNG~sl~g~sh~eAV~lLk~sg~~ 170 (684)
...+.+. +...+|||+|.++.+.. ..+++|..|.++|||+++|+|++||+|++|||.++.++++.+++.+|+..+..
T Consensus 18 ~~~v~l~-~~~~glG~~l~~~~~~~--~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~~ 94 (116)
T 2dm8_A 18 EMIIEIS-KGRSGLGLSIVGGKDTP--LNAIVIHEVYEEGAAARDGRLWAGDQILEVNGVDLRNSSHEEAITALRQTPQK 94 (116)
T ss_dssp CEEEEEE-CCSSCCCCCCBCCTTSS--CSSEECCCCCSSSHHHHHTCCCTTCEEEEETTEECSSSCHHHHHHHHHTCCSE
T ss_pred EEEEEEE-ECCCcccEEEeCCCCCC--cCCEEEEEECCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCe
Confidence 3555554 45689999999876532 24799999999999999999999999999999999999999999999988899
Q ss_pred EEEEEEecCcc
Q psy2533 171 VTLEIAKQGAI 181 (684)
Q Consensus 171 V~LvV~R~~~~ 181 (684)
|.|+|.|....
T Consensus 95 v~l~v~R~~~~ 105 (116)
T 2dm8_A 95 VRLVVYRDEAH 105 (116)
T ss_dssp EEEEEECCSSC
T ss_pred EEEEEEeCCcc
Confidence 99999987654
No 125
>2edp_A Fragment, shroom family member 4; APX/shroom family member, KIAA1202 protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.22 E-value=1.5e-11 Score=107.90 Aligned_cols=88 Identities=16% Similarity=0.229 Sum_probs=76.1
Q ss_pred CCceEEEEEecCCCcccEEEEeccCCCCCcccEEEEEecCCChhcccCccccCCeeeecCCeecCCCCHHHHHHHHHcCC
Q psy2533 89 SSMKSHSVRDMLRQEAKLSEMSEEGAGQDRLGIYIKSVVKGGAADANGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTG 168 (684)
Q Consensus 89 s~~~~V~v~k~~~~GLGfsI~GG~~~~~~~~gIfIs~V~pGGpA~r~GrLqvGDrILaVNG~sl~g~sh~eAV~lLk~sg 168 (684)
...+.+.+.+....+|||+|.+|.+.. .+++|..|.++|||+++|.|++||+|++|||.++.++ +.+++.+++..+
T Consensus 8 ~~~~~~~v~~~~~~~~G~~~~gg~~~~---~~v~V~~V~~~spA~~agGL~~GD~I~~ing~~v~~~-~~~~~~~~~~~~ 83 (100)
T 2edp_A 8 GSFQYVPVQLQGGAPWGFTLKGGLEHC---EPLTVSKIEDGGKAALSQKMRTGDELVNINGTPLYGS-RQEALILIKGSF 83 (100)
T ss_dssp CCCEEEEEECCSCSCCCCCEEEEGGGT---EEEEECCCCTTSHHHHHTSCCTTCEEEEETTEECCSC-SHHHHHHHHTCC
T ss_pred CCcEEEEEEECCCCCcCEEEeccCCCC---CCeEEEEECCCCHHHHcCCCCCCCEEEEECCEEccch-HHHHHHHHHhCC
Confidence 455677777777789999999986543 4799999999999999933999999999999999997 899999999888
Q ss_pred CEEEEEEEecCc
Q psy2533 169 PIVTLEIAKQGA 180 (684)
Q Consensus 169 ~~V~LvV~R~~~ 180 (684)
..|.|+|.|...
T Consensus 84 ~~v~l~v~R~~~ 95 (100)
T 2edp_A 84 RILKLIVRRRNS 95 (100)
T ss_dssp SSCEEEEEECCC
T ss_pred CeEEEEEEeCCC
Confidence 899999999753
No 126
>2f5y_A Regulator of G-protein signalling 3 isoform 1; PDZ domain, RGS-3, human, structural genomics, structural GE consortium, SGC, signaling protein; 2.39A {Homo sapiens} SCOP: b.36.1.1
Probab=99.22 E-value=4.6e-11 Score=102.76 Aligned_cols=82 Identities=13% Similarity=0.156 Sum_probs=70.6
Q ss_pred ceEEEEEecCCCcccEEEEeccCCCCCcccEEEEEecCCChhcccCccccCCeeeecCCeecCCCCHHHHHHHHHcCCCE
Q psy2533 91 MKSHSVRDMLRQEAKLSEMSEEGAGQDRLGIYIKSVVKGGAADANGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGPI 170 (684)
Q Consensus 91 ~~~V~v~k~~~~GLGfsI~GG~~~~~~~~gIfIs~V~pGGpA~r~GrLqvGDrILaVNG~sl~g~sh~eAV~lLk~sg~~ 170 (684)
.++|.+.+ ...+|||.+.++ .+++|..|.++|||+++| |++||+|++|||.++.++++.+++.+|+..+..
T Consensus 4 ~r~v~l~~-~~~g~G~~l~~~-------~~~~V~~V~~~spA~~aG-l~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~~ 74 (91)
T 2f5y_A 4 YRQITIPR-GKDGFGFTICCD-------SPVRVQAVDSGGPAERAG-LQQLDTVLQLNERPVEHWKCVELAHEIRSCPSE 74 (91)
T ss_dssp EEEEEEEC-BTTBTSEEEECS-------SSCEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHTCSSE
T ss_pred eEEEEEEe-CCCCccEEEecC-------CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCe
Confidence 45666665 457899999753 258999999999999999 999999999999999999999999999988889
Q ss_pred EEEEEEecCcc
Q psy2533 171 VTLEIAKQGAI 181 (684)
Q Consensus 171 V~LvV~R~~~~ 181 (684)
+.|+|.|..+.
T Consensus 75 v~l~v~R~~~~ 85 (91)
T 2f5y_A 75 IILLVWRMVPQ 85 (91)
T ss_dssp EEEEEEECC--
T ss_pred EEEEEEeCCCC
Confidence 99999997643
No 127
>1wfv_A Membrane associated guanylate kinase inverted-2; atrophin-1 interacting protein 1, activin receptor interacting protein 1; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.21 E-value=1.5e-11 Score=107.44 Aligned_cols=85 Identities=21% Similarity=0.345 Sum_probs=73.2
Q ss_pred eEEEEEecCCCcccEEEEeccCCCCCcccEEEEEecCCChhcccCccccCCeeeecCCeecCCCCHHHHHHHHHcCCCEE
Q psy2533 92 KSHSVRDMLRQEAKLSEMSEEGAGQDRLGIYIKSVVKGGAADANGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGPIV 171 (684)
Q Consensus 92 ~~V~v~k~~~~GLGfsI~GG~~~~~~~~gIfIs~V~pGGpA~r~GrLqvGDrILaVNG~sl~g~sh~eAV~lLk~sg~~V 171 (684)
..+.+.+ ...||||+|.++.+.. .+++|..|.++|||+++|+|++||+|++|||.++.++++.+++.+++..+..|
T Consensus 13 ~~v~l~~-~~~g~G~~~~~~~~~~---~~~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~g~~v 88 (103)
T 1wfv_A 13 FTVDMEK-GAKGFGFSIRGGREYK---MDLYVLRLAEDGPAIRNGRMRVGDQIIEINGESTRDMTHARAIELIKSGGRRV 88 (103)
T ss_dssp EECCEEC-CTTSSSBCCEEETTTT---EEEECCCBCTTSHHHHHCSSCTTCEEEEETTEECSSCCHHHHHHHHHHHCSEE
T ss_pred EEEEEec-CCCcCCEEEeccccCC---CCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeE
Confidence 3444443 4578999999876532 48999999999999999999999999999999999999999999999888999
Q ss_pred EEEEEecCc
Q psy2533 172 TLEIAKQGA 180 (684)
Q Consensus 172 ~LvV~R~~~ 180 (684)
.|+|.|...
T Consensus 89 ~l~v~R~~~ 97 (103)
T 1wfv_A 89 RLLLKRGTG 97 (103)
T ss_dssp CEEEECTTC
T ss_pred EEEEEECCC
Confidence 999988754
No 128
>2vz5_A TAX1-binding protein 3; WNT signaling pathway, protein binding, nucleus, cytoplasm, PDZ domain; 1.74A {Homo sapiens} PDB: 3dj1_A 3diw_A 2l4s_A 2l4t_A 3gj9_A 2kg2_A 3dj3_A
Probab=99.21 E-value=4.2e-11 Score=111.86 Aligned_cols=95 Identities=23% Similarity=0.397 Sum_probs=76.3
Q ss_pred CCCCCceEEEEEecC---CCcccEEEEeccCCC---------CCcccEEEEEecCCChhcccCccccCCeeeecCCeecC
Q psy2533 86 RLDSSMKSHSVRDML---RQEAKLSEMSEEGAG---------QDRLGIYIKSVVKGGAADANGRLQAGDQLLKVDGQSLV 153 (684)
Q Consensus 86 ~~~s~~~~V~v~k~~---~~GLGfsI~GG~~~~---------~~~~gIfIs~V~pGGpA~r~GrLqvGDrILaVNG~sl~ 153 (684)
..+...+.|.+.+.+ ..+|||+|.+|.+.. ....|++|..|.++|||+++| |++||+|++|||.++.
T Consensus 19 ~~~~~~~~v~l~~~~~~~~~~lG~~i~~g~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG-L~~GD~I~~vng~~v~ 97 (139)
T 2vz5_A 19 YFQSMVQRVEIHKLRQGENLILGFSIGGGIDQDPSQNPFSEDKTDKGIYVTRVSEGGPAEIAG-LQIGDKIMQVNGWDMT 97 (139)
T ss_dssp ---CEEEEEEEECEEETTEEECSEEEEECTTSCGGGCSSCSSTTCCCEEEEEECTTSHHHHHT-CCTTCEEEEETTEECT
T ss_pred cCCCceEEEEEEEcCCCCcccccEEEEccccCChhhhhhcccCCCCCEEEEEECCCCHHHHCC-CCCCCEEEEECCEEcC
Confidence 444566777776644 347999999886532 123589999999999999999 9999999999999999
Q ss_pred CCCHHHHHHHHHc-CCCEEEEEEEecCcc
Q psy2533 154 GITQEKAAEYLVR-TGPIVTLEIAKQGAI 181 (684)
Q Consensus 154 g~sh~eAV~lLk~-sg~~V~LvV~R~~~~ 181 (684)
++++.+++.+|+. .+..|.|+|.|....
T Consensus 98 ~~~~~~~~~~l~~~~g~~v~l~v~R~g~~ 126 (139)
T 2vz5_A 98 MVTHDQARKRLTKRSEEVVRLLVTRQSLQ 126 (139)
T ss_dssp TCCHHHHHHHHCCTTCSEEEEEEEECC--
T ss_pred CCCHHHHHHHHHhCCCCEEEEEEEECCEE
Confidence 9999999999987 467899999998643
No 129
>3pv2_A DEGQ; trypsin fold, PDZ domain, chaperone protease, hydrolase; 2.15A {Legionella fallonii} PDB: 3pv3_A 3pv5_A 3pv4_A
Probab=99.20 E-value=1.3e-11 Score=135.85 Aligned_cols=160 Identities=12% Similarity=0.145 Sum_probs=106.7
Q ss_pred ccEEEEEecCCChhcccCccccCCeeeecCCeecCCCCHHHHHHHHH--cCCCEEEEEEEecCccccccccccCCCCCcc
Q psy2533 119 LGIYIKSVVKGGAADANGRLQAGDQLLKVDGQSLVGITQEKAAEYLV--RTGPIVTLEIAKQGAIYHGLATLLSQPSPVM 196 (684)
Q Consensus 119 ~gIfIs~V~pGGpA~r~GrLqvGDrILaVNG~sl~g~sh~eAV~lLk--~sg~~V~LvV~R~~~~~~~~stl~s~psP~~ 196 (684)
.|++|..|.++|||+++| |++||+|++|||.++.+. .+...++. ..+..|.|+|.|.........++...+ ..
T Consensus 282 ~G~~V~~V~~~spA~~aG-L~~GDvI~~vnG~~v~~~--~~l~~~l~~~~~g~~v~l~V~R~g~~~~~~v~l~~~~--~~ 356 (451)
T 3pv2_A 282 QGALVSQVNPNSPAELAG-LKAGDIITQINDTKITQA--TQVKTTISLLRVGSTVKIIVERDNKPLTLSAVVTDIK--SH 356 (451)
T ss_dssp CCEEEEEECTTSHHHHHT-CCTTCEEEEETTEECCSH--HHHHHHHHTSCTTCEEEEEEEETTEEEEEEEECBCHH--HH
T ss_pred ceEEEEecCCCChHHHcC-CCCCCEEEEECCEEcCCH--HHHHHHHHhcCCCCEEEEEEEECCEEEEEEEEEccCC--cc
Confidence 589999999999999999 999999999999999875 55555555 457899999999875432222111000 00
Q ss_pred ccCCCccccccccccccccccccccccCCCCCCCCCCCCCCCCCCcccccccccccCCCCCCCCCCCCCCCCCCCCCCcE
Q psy2533 197 TRGQVKTYESTISVQQRKERSSQNLHDMNNGVGGSHHPAPGPGSGMNHHPVVSRQASTPSLPQASPYPAPAPAPADPERF 276 (684)
Q Consensus 197 ~s~~~~~ses~ls~~~~~~~~sv~L~k~s~GlGfSi~~~~g~G~Gi~ikpIv~~~~~t~slp~~sl~~gs~~~~~d~GIF 276 (684)
.. . ........ +|+.+ .++..... ......|++
T Consensus 357 ----------~~--~------~~~~~~~~--~G~~l------------~~~~~~~~---------------~~~~~~Gv~ 389 (451)
T 3pv2_A 357 ----------EQ--K------LQSNNPFL--YGLAL------------RAFEQESP---------------PHGNVIGVQ 389 (451)
T ss_dssp ----------HH--H------HHHHSTTT--TTEEE------------EEEEEECT---------------TSCEEEEEE
T ss_pred ----------cc--c------cccccccc--ccccc------------ccCChhHh---------------cccCCCceE
Confidence 00 0 00000001 11111 11110000 001235789
Q ss_pred EEecc--hhhhhcCCCCCCCEEEEECCEecCCCCHHHHHHHHHhCCCeEEEEEEeCCcc
Q psy2533 277 YQNLS--VYRNQNGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGPIVTLEIAKQGAI 333 (684)
Q Consensus 277 V~sI~--GaAardGrLr~GDqIL~VNG~sl~g~Th~eAv~lLk~sg~~VtL~V~R~~~~ 333 (684)
|..|. ++|++.| |++||+|++|||+.+.+ .++...+|+..+..|.|.|.|.+..
T Consensus 390 V~~V~~gspA~~aG-L~~GD~I~~Vng~~v~~--~~~~~~~l~~~~~~v~l~v~R~g~~ 445 (451)
T 3pv2_A 390 VVGASENSAGWRAG-IRPGDIIISANKKPVTD--VKSLQTIAQEKKKELLVQVLRGPGS 445 (451)
T ss_dssp EEEECTTSHHHHHT-CCTTCEEEEETTEECCS--HHHHHHHTTSSCSCEEEEEEETTEE
T ss_pred EEEECCCCHHHHcC-CCCCCEEEEECCEECCC--HHHHHHHHhcCCCeEEEEEEECCEE
Confidence 99987 6788877 99999999999999975 4788888988888999999998754
No 130
>1um7_A Synapse-associated protein 102; PDZ, discs large homolog 3, DLG3-human presynaptic protein, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.20 E-value=2e-11 Score=108.43 Aligned_cols=89 Identities=27% Similarity=0.386 Sum_probs=77.0
Q ss_pred CCCceEEEEEecCCCcccEEEEeccCCCCCcccEEEEEecCCChhcccCccccCCeeeecCCeecCCCCHHHHHHHHHcC
Q psy2533 88 DSSMKSHSVRDMLRQEAKLSEMSEEGAGQDRLGIYIKSVVKGGAADANGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRT 167 (684)
Q Consensus 88 ~s~~~~V~v~k~~~~GLGfsI~GG~~~~~~~~gIfIs~V~pGGpA~r~GrLqvGDrILaVNG~sl~g~sh~eAV~lLk~s 167 (684)
....+.|.+.+ ...+|||+|.++.+ ..+++|..|.+++||+++|+|++||+|++|||+++.++++.+++.+++..
T Consensus 13 ~~~~~~v~l~k-~~~glG~~l~~~~~----~~gv~V~~V~~~s~A~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~~~~~ 87 (113)
T 1um7_A 13 AREPRKIILHK-GSTGLGFNIVGGED----GEGIFVSFILAGGPADLSGELRRGDRILSVNGVNLRNATHEQAAAALKRA 87 (113)
T ss_dssp CCSEEEEEEEC-CSSCSSBCCBCCST----TCCCBCCCBCSSSHHHHTTCCCTTCEEEEESSCBCTTCCHHHHHHHHHSC
T ss_pred CCceEEEEEEE-CCCcccEEEEeccC----CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence 34566777765 45799999998654 24799999999999999999999999999999999999999999999988
Q ss_pred CCEEEEEEEecCcc
Q psy2533 168 GPIVTLEIAKQGAI 181 (684)
Q Consensus 168 g~~V~LvV~R~~~~ 181 (684)
+..+.|+|.|+...
T Consensus 88 ~~~v~l~v~r~~~~ 101 (113)
T 1um7_A 88 GQSVTIVAQYRPEE 101 (113)
T ss_dssp CSEEEEEEECCHHH
T ss_pred CCcEEEEEEECcch
Confidence 99999999987643
No 131
>2qbw_A PDZ-fibronectin fusion protein; fibronectin PDZ, unknown function; 1.80A {Homo sapiens} PDB: 3ch8_A
Probab=99.19 E-value=5.5e-11 Score=114.88 Aligned_cols=75 Identities=28% Similarity=0.391 Sum_probs=67.9
Q ss_pred CCcccEEEEeccCC---C--CCcccEEEEEecCCChhcccCccccCCeeeecCCeecCCCCHHHHHHHHHcCCCEEEEEE
Q psy2533 101 RQEAKLSEMSEEGA---G--QDRLGIYIKSVVKGGAADANGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGPIVTLEI 175 (684)
Q Consensus 101 ~~GLGfsI~GG~~~---~--~~~~gIfIs~V~pGGpA~r~GrLqvGDrILaVNG~sl~g~sh~eAV~lLk~sg~~V~LvV 175 (684)
+.||||+|.||.+. + ....|++|..|.++|||++ | |++||+|++|||.++.+++|.+++.+++..+..|.|.|
T Consensus 1 ~~g~Gf~i~gg~~~~~~~~~~~~~g~~V~~v~~~spA~~-g-l~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~l~v 78 (195)
T 2qbw_A 1 SPELGFSISGGVGGRGNPFRPDDDGIFVTRVQPEGPASK-L-LQPGDKIIQANGYSFINIEHGQAVSLLKTFQNTVELII 78 (195)
T ss_dssp CCCSSEEEEECTTSCCCSSCTTCCSEEEEEECTTSTTTT-T-CCTTCEEEEETTEECTTCCHHHHHHHHHHCCSEEEEEE
T ss_pred CCcccEEEECCcCCCCCccccCCCCEEEEEECCCChHHh-C-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEE
Confidence 46899999998642 1 1356899999999999999 8 99999999999999999999999999999999999999
Q ss_pred Ee
Q psy2533 176 AK 177 (684)
Q Consensus 176 ~R 177 (684)
.|
T Consensus 79 ~r 80 (195)
T 2qbw_A 79 VR 80 (195)
T ss_dssp EE
T ss_pred EE
Confidence 99
No 132
>2z17_A Pleckstrin homology SEC7 and coiled-coil domains- binding protein; PDZ domain, cytoplasm, membrane, polymorphism, protein binding; 2.70A {Homo sapiens}
Probab=99.19 E-value=8.2e-11 Score=103.58 Aligned_cols=85 Identities=22% Similarity=0.279 Sum_probs=71.7
Q ss_pred CceEEEEEecCCCcccEEEEeccCC----CCCcccEEEEEecCCChhcccCccccCCeeeecCCeecCCCCHHHHHHHHH
Q psy2533 90 SMKSHSVRDMLRQEAKLSEMSEEGA----GQDRLGIYIKSVVKGGAADANGRLQAGDQLLKVDGQSLVGITQEKAAEYLV 165 (684)
Q Consensus 90 ~~~~V~v~k~~~~GLGfsI~GG~~~----~~~~~gIfIs~V~pGGpA~r~GrLqvGDrILaVNG~sl~g~sh~eAV~lLk 165 (684)
..+.+.+.+...++|||+|.+.... .....+++|..|.++|||+++| |++||+|++|||.++.++++.+++.+|+
T Consensus 15 ~~~~v~l~~~~~~~~G~~l~~~~~~~~~~~~~~~~~~V~~V~~~spA~~aG-l~~GD~I~~vng~~v~~~~~~~~~~~l~ 93 (104)
T 2z17_A 15 QRKLVTVEKQDNETFGFEIQSYRPQNQNACSSEMFTLICKIQEDSPAHCAG-LQAGDVLANINGVSTEGFTYKQVVDLIR 93 (104)
T ss_dssp CCCEEEEECCTTSCCSEEEEECCCCCCSSSCCSCCEEEEEECTTSHHHHHT-CCTTCBCCEETTEECTTCCHHHHHHHHH
T ss_pred cceEEEEEeCCCCCccEEEEeeecccCCcccCCCCeEEEEECCCChHHHcC-CCCCCEEEEECCEEcCCCCHHHHHHHHH
Confidence 3456778777788999999984211 1123589999999999999999 9999999999999999999999999999
Q ss_pred cCCCEEEEEE
Q psy2533 166 RTGPIVTLEI 175 (684)
Q Consensus 166 ~sg~~V~LvV 175 (684)
..++.|.|+|
T Consensus 94 ~~~~~v~l~v 103 (104)
T 2z17_A 94 SSGNLLTIET 103 (104)
T ss_dssp HTTTEEEEEC
T ss_pred hCCCcEEEEE
Confidence 9888888875
No 133
>3soe_A Membrane-associated guanylate kinase, WW and PDZ containing protein 3; structural genomics consortium, SGC, PDZ domain, signaling P; 1.60A {Homo sapiens}
Probab=99.18 E-value=1.1e-10 Score=106.52 Aligned_cols=81 Identities=20% Similarity=0.233 Sum_probs=67.3
Q ss_pred CceEEEEEecCCCcccEEEEeccCCCCCcccEEEEEecCCChhcccCccccCCeeeecCCeecCCCCHHHHHHHHHcC--
Q psy2533 90 SMKSHSVRDMLRQEAKLSEMSEEGAGQDRLGIYIKSVVKGGAADANGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRT-- 167 (684)
Q Consensus 90 ~~~~V~v~k~~~~GLGfsI~GG~~~~~~~~gIfIs~V~pGGpA~r~GrLqvGDrILaVNG~sl~g~sh~eAV~lLk~s-- 167 (684)
...+|.|.|. ..||||+|.++.. +.+|..|.+ +|...| |++||+|++|||.++.+++|.+++.+|+.+
T Consensus 12 ~~~~V~L~Kg-~~G~GFsI~~~~~------g~~V~~I~~--~~~~aG-L~~GD~Il~VNG~~v~~~~h~evv~~lk~~~~ 81 (113)
T 3soe_A 12 LLVTIPLIKG-PKGFGFAIADSPT------GQKVKMILD--SQWCQG-LQKGDIIKEIYHQNVQNLTHLQVVEVLKQFPV 81 (113)
T ss_dssp EEEEEEEECB-TTBSSEEEEEETT------EEEEEEESC--GGGSTT-CCTTCEEEEETTEECTTSCHHHHHHHHHHSCT
T ss_pred CEEEEEEEEC-CCcccEEEeCCCC------CcEEEEecC--hHHhCC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCC
Confidence 3456777764 6799999976432 678999998 455555 999999999999999999999999999986
Q ss_pred CCEEEEEEEecCc
Q psy2533 168 GPIVTLEIAKQGA 180 (684)
Q Consensus 168 g~~V~LvV~R~~~ 180 (684)
+..|.|+|.|...
T Consensus 82 G~~v~L~V~R~g~ 94 (113)
T 3soe_A 82 GADVPLLILRGGP 94 (113)
T ss_dssp TCEEEEEEEESSC
T ss_pred CCEEEEEEEECCc
Confidence 6799999999864
No 134
>2kv8_A RGS12, regulator of G-protein signaling 12; PDZ domain, signaling protein; NMR {Homo sapiens}
Probab=99.18 E-value=1.5e-11 Score=103.81 Aligned_cols=79 Identities=23% Similarity=0.334 Sum_probs=69.0
Q ss_pred ceEEEEEecCCCcccEEEEeccCCCCCcccEEEEEecCCChhcccCccccCCeeeecCCeecCCCCHHHHHHHHHcCCCE
Q psy2533 91 MKSHSVRDMLRQEAKLSEMSEEGAGQDRLGIYIKSVVKGGAADANGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGPI 170 (684)
Q Consensus 91 ~~~V~v~k~~~~GLGfsI~GG~~~~~~~~gIfIs~V~pGGpA~r~GrLqvGDrILaVNG~sl~g~sh~eAV~lLk~sg~~ 170 (684)
.++|.+.+. ..+|||++.++ .+++|..|.++|||+++| |++||+|++|||.++.+++|.+++.+|+..+..
T Consensus 3 ~r~v~l~~~-~~g~G~~~~~~-------~~~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~ 73 (83)
T 2kv8_A 3 VRSVEVARG-RAGYGFTLSGQ-------APCVLSCVMRGSPADFVG-LRAGDQILAVNEINVKKASHEDVVKLIGKCSGV 73 (83)
T ss_dssp EEEEEECCC-SSCCSCBCCCS-------SSCBCCBCCTTSTTTTTT-CCTTCEEEEETTEECSSCCHHHHHHHHTTCSSC
T ss_pred cEEEEEEeC-CCcccEEEEcC-------CCeEEEEeCCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCe
Confidence 456666554 47899998753 268999999999999999 999999999999999999999999999988888
Q ss_pred EEEEEEec
Q psy2533 171 VTLEIAKQ 178 (684)
Q Consensus 171 V~LvV~R~ 178 (684)
+.|+|.|.
T Consensus 74 v~l~v~R~ 81 (83)
T 2kv8_A 74 LHMVIAEG 81 (83)
T ss_dssp EEEEEECC
T ss_pred EEEEEEcC
Confidence 99999875
No 135
>2dls_A PDZ-rhogef, RHO guanine nucleotide exchange factor 11; PDZ domain, arhgef11, KIAA0380, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2omj_A 2os6_A
Probab=99.18 E-value=1.3e-10 Score=100.52 Aligned_cols=82 Identities=18% Similarity=0.338 Sum_probs=70.6
Q ss_pred CCceEEEEEecCCCcccEEEEeccCCCCCcccEEEEEecCCChhcccCccccCCeeeecCCeecCCCCHHHHHHHHHcCC
Q psy2533 89 SSMKSHSVRDMLRQEAKLSEMSEEGAGQDRLGIYIKSVVKGGAADANGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTG 168 (684)
Q Consensus 89 s~~~~V~v~k~~~~GLGfsI~GG~~~~~~~~gIfIs~V~pGGpA~r~GrLqvGDrILaVNG~sl~g~sh~eAV~lLk~sg 168 (684)
...++|.+.+ ...+|||.+.+. .+++|..|.+++||+++| |++||+|++|||.++.++++.+++..++ .+
T Consensus 7 ~~~r~v~l~~-~~~~~G~~l~~~-------~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~~~-~g 76 (93)
T 2dls_A 7 GVQRCVIIQK-DQHGFGFTVSGD-------RIVLVQSVRPGGAAMKAG-VKEGDRIIKVNGTMVTNSSHLEVVKLIK-SG 76 (93)
T ss_dssp CCEEEEEEEC-SSSSCCEEEECS-------SSCEEEEECSSSTTTTTT-CCSSCEEEEETTEECSSSCHHHHHHHHT-SS
T ss_pred CCCEEEEEEe-CCCceeEEEeCC-------CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHhhc-CC
Confidence 4456676654 557999999752 368999999999999999 9999999999999999999999999887 58
Q ss_pred CEEEEEEEecCc
Q psy2533 169 PIVTLEIAKQGA 180 (684)
Q Consensus 169 ~~V~LvV~R~~~ 180 (684)
..|.|+|.|...
T Consensus 77 ~~v~l~v~R~~~ 88 (93)
T 2dls_A 77 AYVALTLLGSSS 88 (93)
T ss_dssp SEEEEEEECCCC
T ss_pred CEEEEEEEECCC
Confidence 999999998753
No 136
>2edz_A PDZ domain-containing protein 1; CFTR-associated protein of 70 kDa, Na/PI cotransporter C- terminal-associated protein, NAPI-CAP1; NMR {Mus musculus}
Probab=99.18 E-value=6.5e-11 Score=106.03 Aligned_cols=87 Identities=20% Similarity=0.279 Sum_probs=77.2
Q ss_pred CceEEEEEecCCCcccEEEEeccCCCCCcccEEEEEecCCChhcccCccccCCeeeecCCeecCCCCHHHHHHHHHcCCC
Q psy2533 90 SMKSHSVRDMLRQEAKLSEMSEEGAGQDRLGIYIKSVVKGGAADANGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGP 169 (684)
Q Consensus 90 ~~~~V~v~k~~~~GLGfsI~GG~~~~~~~~gIfIs~V~pGGpA~r~GrLqvGDrILaVNG~sl~g~sh~eAV~lLk~sg~ 169 (684)
...++.+.+....+|||.|.++.+. .+++|..|.++|||+++| |++||+|++|||.++.++++.+++.+|+..+.
T Consensus 13 dp~~~~l~~~~~~~~G~~l~~~~~~----~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~ 87 (114)
T 2edz_A 13 NPRECKLSKQEGQNYGFFLRIEKDT----DGHLIRVIEEGSPAEKAG-LLDGDRVLRINGVFVDKEEHAQVVELVRKSGN 87 (114)
T ss_dssp CCEEEEEECCTTCCCSCEEECCTTC----CSCEEECCCTTCTTGGGT-CCTTCEEEEESSSBCSSSCHHHHHHHHHHTCS
T ss_pred CCEEEEEeCCCCCcccEEEEEecCC----CCeEEEEeCCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCC
Confidence 4677888888889999999875432 479999999999999999 99999999999999999999999999998899
Q ss_pred EEEEEEEecCcc
Q psy2533 170 IVTLEIAKQGAI 181 (684)
Q Consensus 170 ~V~LvV~R~~~~ 181 (684)
.|.|+|.|....
T Consensus 88 ~v~l~v~R~~~~ 99 (114)
T 2edz_A 88 SVTLLVLDGDSY 99 (114)
T ss_dssp EEEEEEECHHHH
T ss_pred EEEEEEEECCcc
Confidence 999999987643
No 137
>1x5n_A Harmonin; PDZ domain, usher syndrome 1C protein, autoimmune enteropathy-related antigen AIE-75 ,antigen NY-CO-38/NY-CO- 37, PDZ-73 protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2kbs_A
Probab=99.17 E-value=9.4e-11 Score=104.68 Aligned_cols=87 Identities=22% Similarity=0.289 Sum_probs=76.5
Q ss_pred CCCCceEEEEEecCCCcccEEEEeccCCCCCcccEEEEEecCCChhcccCccccCCeeeecCCeecCCCCHHHHHHHHHc
Q psy2533 87 LDSSMKSHSVRDMLRQEAKLSEMSEEGAGQDRLGIYIKSVVKGGAADANGRLQAGDQLLKVDGQSLVGITQEKAAEYLVR 166 (684)
Q Consensus 87 ~~s~~~~V~v~k~~~~GLGfsI~GG~~~~~~~~gIfIs~V~pGGpA~r~GrLqvGDrILaVNG~sl~g~sh~eAV~lLk~ 166 (684)
.....+++.+.++...+|||+|.++.+. ..+++|..|.+++||+++| |++||+|++|||.++.++.+.+++.+++.
T Consensus 12 ~~~~~~~v~~~~~~~~~lG~~l~~~~~~---~~gv~V~~V~~~s~A~~aG-L~~GD~Il~vng~~v~~~~~~~~~~~~~~ 87 (114)
T 1x5n_A 12 RENKEKKVFISLVGSRGLGCSISSGPIQ---KPGIFISHVKPGSLSAEVG-LEIGDQIVEVNGVDFSNLDHKEAVNVLKS 87 (114)
T ss_dssp CCCSSEEEEECCCSSCCCCEEEEECCSS---SCSEEEEEECTTSTTTTTT-CCTTCEEEEETTEETTSCCTTHHHHHHHH
T ss_pred CCCCcEEEEEEEcCCCceeEEEeecCCC---CCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHhc
Confidence 3456788888888899999999987543 2479999999999999999 99999999999999999999999999987
Q ss_pred CCCEEEEEEEec
Q psy2533 167 TGPIVTLEIAKQ 178 (684)
Q Consensus 167 sg~~V~LvV~R~ 178 (684)
. ..+.|+|.|.
T Consensus 88 ~-~~v~l~v~r~ 98 (114)
T 1x5n_A 88 S-RSLTISIVAA 98 (114)
T ss_dssp C-SSEEEEECSS
T ss_pred C-CeEEEEEEcC
Confidence 6 5799999876
No 138
>1y7n_A Amyloid beta A4 precursor protein-binding family A member 1; copper chaperone for superoxide dismutase, neuronal adaptor, protein transport; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.16 E-value=1.1e-10 Score=101.27 Aligned_cols=76 Identities=25% Similarity=0.399 Sum_probs=65.5
Q ss_pred ceEEEEEecCCCcccEEEEeccCCCCCcccEEEEEecCCChhcccCccccCCeeeecCCeecCCCCHHHHHHHHHcCCCE
Q psy2533 91 MKSHSVRDMLRQEAKLSEMSEEGAGQDRLGIYIKSVVKGGAADANGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGPI 170 (684)
Q Consensus 91 ~~~V~v~k~~~~GLGfsI~GG~~~~~~~~gIfIs~V~pGGpA~r~GrLqvGDrILaVNG~sl~g~sh~eAV~lLk~sg~~ 170 (684)
...+........+|||.+.+ | +|..|.++|||+++| |++||+|++|||.++.++++.+++.+|+..+..
T Consensus 13 ~~~~i~~~~~~~~lG~~~~~---------G-~V~~V~~~spA~~aG-L~~GD~Il~Ing~~v~~~~~~~~~~~l~~~g~~ 81 (90)
T 1y7n_A 13 TTVLIRRPDLRYQLGFSVQN---------G-IICSLMRGGIAERGG-VRVGHRIIEINGQSVVATPHEKIVHILSNAVGE 81 (90)
T ss_dssp EEEEEEESSTTSCCCEEEET---------T-EEEEECTTSHHHHHT-CCSSCEEEEETTEECTTSCHHHHHHHHHHCCEE
T ss_pred ceEEEEeCCCccccCeEecC---------C-EEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCe
Confidence 33344444557889999964 2 899999999999999 999999999999999999999999999988889
Q ss_pred EEEEEEe
Q psy2533 171 VTLEIAK 177 (684)
Q Consensus 171 V~LvV~R 177 (684)
|.|+|.+
T Consensus 82 v~l~v~p 88 (90)
T 1y7n_A 82 IHMKTMP 88 (90)
T ss_dssp EEEEEEC
T ss_pred EEEEEEE
Confidence 9998864
No 139
>2lob_A Golgi-associated PDZ and coiled-coil motif-contai protein; structural protein-hydrolase complex, peptide binding protei; NMR {Homo sapiens}
Probab=98.77 E-value=3.3e-12 Score=115.26 Aligned_cols=84 Identities=21% Similarity=0.323 Sum_probs=73.7
Q ss_pred CceEEEEEecCCCcccEEEEeccCCCCCcccEEEEEecCCChhcc-cCccccCCeeeecCCeecCCCCHHHHHHHHHcCC
Q psy2533 90 SMKSHSVRDMLRQEAKLSEMSEEGAGQDRLGIYIKSVVKGGAADA-NGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTG 168 (684)
Q Consensus 90 ~~~~V~v~k~~~~GLGfsI~GG~~~~~~~~gIfIs~V~pGGpA~r-~GrLqvGDrILaVNG~sl~g~sh~eAV~lLk~sg 168 (684)
..+.|.+.+....+|||++.+|.+.. .+++|..|.++|||++ +| |++||+|++|||.++.++++.+++.+|+..+
T Consensus 27 ~~~~v~l~k~~~~glG~~l~~g~~~~---~gv~V~~V~~~spA~~~aG-L~~GD~Il~ING~~v~~~~~~~~~~~l~~~~ 102 (112)
T 2lob_A 27 GIRKVLLLKEDHEGLGISITGGKEHG---VPILISEIHPGQPADRCGG-LHVGDAILAVNGVNLRDTKHKEAVTILSQQR 102 (112)
Confidence 45678888888899999999876543 4799999999999999 56 9999999999999999999999999999888
Q ss_pred CEEEEEEEe
Q psy2533 169 PIVTLEIAK 177 (684)
Q Consensus 169 ~~V~LvV~R 177 (684)
+.|.|+|.+
T Consensus 103 ~~v~l~V~~ 111 (112)
T 2lob_A 103 GEIEFEVVY 111 (112)
Confidence 888888753
No 140
>3bpu_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; structural genomi consortium, SGC, ATP-binding, cell junction; 1.60A {Homo sapiens}
Probab=99.15 E-value=1.5e-10 Score=98.62 Aligned_cols=81 Identities=20% Similarity=0.322 Sum_probs=65.9
Q ss_pred ceEEEEEecCCCcccEEEEeccCCCCCcccEEEEEecCCChhcccCccccCCeeeecCCeecCCCCHHHHHHHHHc--CC
Q psy2533 91 MKSHSVRDMLRQEAKLSEMSEEGAGQDRLGIYIKSVVKGGAADANGRLQAGDQLLKVDGQSLVGITQEKAAEYLVR--TG 168 (684)
Q Consensus 91 ~~~V~v~k~~~~GLGfsI~GG~~~~~~~~gIfIs~V~pGGpA~r~GrLqvGDrILaVNG~sl~g~sh~eAV~lLk~--sg 168 (684)
..+|.+.+ ...||||++.++.+ ..+++|..| ++|||+ +| |++||+|++|||.++.+++|.+++.+|+. .+
T Consensus 4 ~~~v~l~k-~~~g~G~~~~~~~~----~~~~~v~~v-~~spA~-aG-l~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~g 75 (88)
T 3bpu_A 4 LITVHIVK-GPMGFGFTIADSPG----GGGQRVKQI-VDSPRS-RG-LKEGDLIVEVNKKNVQALTHNQVVDMLVESPKG 75 (88)
T ss_dssp EEEEEEEC-BTTBSSCEEEECTT----SSSEEEEEC-CC--CC-TT-CCTTCEEEEETTEECTTSCHHHHHHHHHTSCTT
T ss_pred EEEEEEEc-CCCceeEEEEecCC----CCcEEEEEe-cCChhH-hC-CCCCCEEEEECCEEcCCCCHHHHHHHHHhCCCC
Confidence 34566655 45899999987543 247999887 999999 88 99999999999999999999999999985 57
Q ss_pred CEEEEEEEecC
Q psy2533 169 PIVTLEIAKQG 179 (684)
Q Consensus 169 ~~V~LvV~R~~ 179 (684)
..|.|+|.|..
T Consensus 76 ~~v~l~v~R~g 86 (88)
T 3bpu_A 76 SEVTLLVQRQT 86 (88)
T ss_dssp CEEEEEEEEEC
T ss_pred CEEEEEEEeCC
Confidence 89999998865
No 141
>1v5l_A PDZ and LIM domain 3; actinin alpha 2 associated LIM protein; PDZ domain, cytoskeleton, actin binding, structural genomics; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.14 E-value=3.4e-11 Score=106.04 Aligned_cols=80 Identities=18% Similarity=0.150 Sum_probs=71.5
Q ss_pred ecCCCcccEEEEeccCCCCCcccEEEEEecCCChhcccCccccCCeeeecCCeecCCCCHHHHHHHHHcCCCEEEEEEEe
Q psy2533 98 DMLRQEAKLSEMSEEGAGQDRLGIYIKSVVKGGAADANGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGPIVTLEIAK 177 (684)
Q Consensus 98 k~~~~GLGfsI~GG~~~~~~~~gIfIs~V~pGGpA~r~GrLqvGDrILaVNG~sl~g~sh~eAV~lLk~sg~~V~LvV~R 177 (684)
.....+|||++.+|.+.. .+++|..|.+++||+++| |++||+|++|||.++.++++.+++.+|+..+..|.|+|.|
T Consensus 11 ~~~~~~lG~~l~~g~~~~---~~~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v~l~v~R 86 (103)
T 1v5l_A 11 LPGPAPWGFRLSGGIDFN---QPLVITRITPGSKAAAAN-LCPGDVILAIDGFGTESMTHADAQDRIKAASYQLCLKIDR 86 (103)
T ss_dssp EESSSCCSBCCEEETTTT---EEEECSCBCTTSTTGGGT-CCTTCBEEEETTEECSSCCHHHHHHHHTTCCSEEECEECC
T ss_pred EcCCCCcCEEEeccccCC---CCeEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEEEEEEE
Confidence 356779999999886542 479999999999999999 9999999999999999999999999999888999999998
Q ss_pred cCcc
Q psy2533 178 QGAI 181 (684)
Q Consensus 178 ~~~~ 181 (684)
....
T Consensus 87 ~g~~ 90 (103)
T 1v5l_A 87 AETR 90 (103)
T ss_dssp CTTT
T ss_pred CCeE
Confidence 7653
No 142
>3gge_A PDZ domain-containing protein GIPC2; structural genomics, structural genomics consort protein binding; 2.60A {Homo sapiens}
Probab=99.13 E-value=1.1e-10 Score=103.45 Aligned_cols=61 Identities=15% Similarity=0.254 Sum_probs=55.2
Q ss_pred CcEEEecc--hhhhhcCCCCCCCEEEEECCEecCCCCHHHHHHHHHhC--CCeEEEEEEeCCccc
Q psy2533 274 ERFYQNLS--VYRNQNGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRT--GPIVTLEIAKQGAIY 334 (684)
Q Consensus 274 GIFV~sI~--GaAardGrLr~GDqIL~VNG~sl~g~Th~eAv~lLk~s--g~~VtL~V~R~~~~~ 334 (684)
.+||+.|. |+|+++|.|++||+|++|||+++.+++|.+++.+|++. +..++|.+.+|...+
T Consensus 29 ~~~I~rI~~gg~a~r~g~L~vGD~I~~VNG~~v~g~~h~evv~lLk~~~~g~~~~L~lv~p~~~~ 93 (95)
T 3gge_A 29 YAFIKRIKDGGVIDSVKTICVGDHIESINGENIVGWRHYDVAKKLKELKKEELFTMKLIEPKKSS 93 (95)
T ss_dssp CCEEEEECTTSHHHHCTTCCTTCEEEEETTEECTTCCHHHHHHHHHHSCTTCEEEEEEEEECSCE
T ss_pred cEEEEEEcCCChHHhcCCCCCCCEEEEECCEEccCCCHHHHHHHHHhCCCCCEEEEEEECccccc
Confidence 47899997 89999999999999999999999999999999999995 458999999886554
No 143
>1qau_A Neuronal nitric oxide synthase (residues 1-130); beta-finger, oxidoreductase; 1.25A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1qav_B
Probab=99.13 E-value=2.6e-10 Score=101.35 Aligned_cols=86 Identities=22% Similarity=0.254 Sum_probs=74.5
Q ss_pred eEEEEEecCCCcccEEEEeccCCCCCcccEEEEEecCCChhcccCccccCCeeeecCCeecCCCCHHHHHHHHHcC-CCE
Q psy2533 92 KSHSVRDMLRQEAKLSEMSEEGAGQDRLGIYIKSVVKGGAADANGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRT-GPI 170 (684)
Q Consensus 92 ~~V~v~k~~~~GLGfsI~GG~~~~~~~~gIfIs~V~pGGpA~r~GrLqvGDrILaVNG~sl~g~sh~eAV~lLk~s-g~~ 170 (684)
.+|.+.+....+|||.+.++.+ ..+++|..|.++|||+++|.|++||+|++|||.++.++++.++..+|+.. +..
T Consensus 3 ~~v~l~~~~~~glG~~~~~~~~----~~~~~V~~v~~~spA~~aGll~~GD~I~~ing~~v~~~~~~~~~~~l~~~~g~~ 78 (112)
T 1qau_A 3 ISVRLFKRKVGGLGFLVKERVS----KPPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDSALEVLRGIASET 78 (112)
T ss_dssp EEEEEECBTTTBTSEEEEECSS----SSCEEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTSCHHHHHHHHHHSCSSS
T ss_pred EEEEEEcCCCCceeEEEEecCC----CCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCc
Confidence 4567777778899999997643 34799999999999999994499999999999999999999999999875 678
Q ss_pred EEEEEEecCcc
Q psy2533 171 VTLEIAKQGAI 181 (684)
Q Consensus 171 V~LvV~R~~~~ 181 (684)
+.|.|.|....
T Consensus 79 v~l~v~R~g~~ 89 (112)
T 1qau_A 79 HVVLILRGPEG 89 (112)
T ss_dssp EEEEEEECCTT
T ss_pred EEEEEEeCCcc
Confidence 99999998754
No 144
>2jxo_A Ezrin-radixin-moesin-binding phosphoprotein 50; nherf-1, PDZ domain, PDZ2, acetylation, cell projection, membrane, polymorphism; NMR {Homo sapiens}
Probab=99.13 E-value=2e-10 Score=99.80 Aligned_cols=83 Identities=19% Similarity=0.314 Sum_probs=69.0
Q ss_pred ceEEEEEecCCCcccEEEEeccCCCCCcccEEEEEecCCChhcccCccccCCeeeecCCeecCCCCHHHHHHHHHcCCC-
Q psy2533 91 MKSHSVRDMLRQEAKLSEMSEEGAGQDRLGIYIKSVVKGGAADANGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGP- 169 (684)
Q Consensus 91 ~~~V~v~k~~~~GLGfsI~GG~~~~~~~~gIfIs~V~pGGpA~r~GrLqvGDrILaVNG~sl~g~sh~eAV~lLk~sg~- 169 (684)
.+.+.+.+ ...||||++.++.+ ..+++|..|.++|||+++| |++||+|++|||.++.++++.+++.+|+...+
T Consensus 10 ~~~~~l~~-~~~g~G~~~~~~~~----~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~ 83 (98)
T 2jxo_A 10 PRLCTMKK-GPSGYGFNLHSDKS----KPGQFIRSVDPDSPAEASG-LRAQDRIVEVNGVCMEGKQHGDVVSAIRAGGDE 83 (98)
T ss_dssp CEEEEEEC-TTTCCCEEEECCCS----SSCEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHTTTTE
T ss_pred cEEEEEEe-CCCcccEEEEecCC----CCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCc
Confidence 35566654 56799999987653 2379999999999999999 99999999999999999999999999998755
Q ss_pred EEEEEEEecC
Q psy2533 170 IVTLEIAKQG 179 (684)
Q Consensus 170 ~V~LvV~R~~ 179 (684)
.+.|+|.|..
T Consensus 84 ~~~l~v~R~g 93 (98)
T 2jxo_A 84 TKLLVVDRET 93 (98)
T ss_dssp EEEEECCHHH
T ss_pred EEEEEEECCc
Confidence 4567777654
No 145
>1uit_A Human discs large 5 protein; PDZ domain, HDLG5, maguk family, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.12 E-value=6.3e-10 Score=99.90 Aligned_cols=85 Identities=26% Similarity=0.332 Sum_probs=73.7
Q ss_pred CceEEEEEecCCCcccEEEEeccCCCCCcccEEEEEecCCChhcccCccccCCeeeecCCeecCCCCHHHHHHHHHcCCC
Q psy2533 90 SMKSHSVRDMLRQEAKLSEMSEEGAGQDRLGIYIKSVVKGGAADANGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGP 169 (684)
Q Consensus 90 ~~~~V~v~k~~~~GLGfsI~GG~~~~~~~~gIfIs~V~pGGpA~r~GrLqvGDrILaVNG~sl~g~sh~eAV~lLk~sg~ 169 (684)
..+.|.+.+. ..+|||.+.++.+ .+++|..|.+++||+++| |++||+|++|||.++.++++.+++.+++..+.
T Consensus 19 ~~~~v~l~~~-~~~lG~~~~~~~~-----~gv~V~~V~~~spA~~aG-L~~GD~Il~vng~~v~~~~~~~~~~~~~~~g~ 91 (117)
T 1uit_A 19 EPRHVKVQKG-SEPLGISIVSGEK-----GGIYVSKVTVGSIAHQAG-LEYGDQLLEFNGINLRSATEQQARLIIGQQCD 91 (117)
T ss_dssp CCEEEEEECS-SCCCCEEEEECTT-----SCEEEEEECTTSHHHHHT-CCTTCEECEETTEETTTCCHHHHHHHTTSCCS
T ss_pred CCEEEEEEeC-CCCccEEEEccCC-----CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCC
Confidence 4556777654 4899999987643 379999999999999999 99999999999999999999999988888899
Q ss_pred EEEEEEEecCcc
Q psy2533 170 IVTLEIAKQGAI 181 (684)
Q Consensus 170 ~V~LvV~R~~~~ 181 (684)
.|.|+|.|....
T Consensus 92 ~v~l~v~r~~~~ 103 (117)
T 1uit_A 92 TITILAQYNPHV 103 (117)
T ss_dssp EEEEEECCCSCC
T ss_pred eEEEEEEECCch
Confidence 999999987654
No 146
>3gsl_A Disks large homolog 4; PDZ domain, tandem, PSD-95, DLG4, SAP-90, GLUR6, cell juncti membrane, lipoprotein, membrane, palmitate, phosphoprotein; 2.05A {Rattus norvegicus} PDB: 3zrt_A 2ka9_A
Probab=99.12 E-value=2.4e-10 Score=109.30 Aligned_cols=86 Identities=29% Similarity=0.416 Sum_probs=73.4
Q ss_pred EEEEecCCCcccEEEEeccCCCC--CcccEEEEEecCCChhcccCccccCCeeeecCCeecCCCCHHHHHHHHHcCCCEE
Q psy2533 94 HSVRDMLRQEAKLSEMSEEGAGQ--DRLGIYIKSVVKGGAADANGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGPIV 171 (684)
Q Consensus 94 V~v~k~~~~GLGfsI~GG~~~~~--~~~gIfIs~V~pGGpA~r~GrLqvGDrILaVNG~sl~g~sh~eAV~lLk~sg~~V 171 (684)
+.+.+. ..+|||++.++.+... ...|++|..|.++|||+++|+|++||+|++|||.++.++++.+++.+|+.++..|
T Consensus 104 v~l~~~-~~~lG~~~~~~~~~~~~~~~~gv~V~~V~~gs~A~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~v 182 (196)
T 3gsl_A 104 IKLIKG-PKGLGFSIAGGVGNQHIPGDNSIYVTKIIEGGAAHKDGRLQIGDKILAVNSVGLEDVMHEDAVAALKNTYDVV 182 (196)
T ss_dssp EEEEEB-TTBSCEEEEESBTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCBHHHHHHHHHSCCEEE
T ss_pred EEEecC-CCCceEEEEccCCCcCCCCCCCEEEEEECCCChHHhcCCCCCCCEEEEECCCcCCCCCHHHHHHHHHcCCCeE
Confidence 334333 4589999998765432 2458999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEecCc
Q psy2533 172 TLEIAKQGA 180 (684)
Q Consensus 172 ~LvV~R~~~ 180 (684)
.|+|.|...
T Consensus 183 ~l~v~R~~~ 191 (196)
T 3gsl_A 183 YLKVAKPSN 191 (196)
T ss_dssp EEEEEEESC
T ss_pred EEEEeCCCC
Confidence 999998754
No 147
>1wif_A RSGI RUH-020, riken cDNA 4930408O21; PDZ domain, structural genomics, mouse cDNA, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.11 E-value=2.6e-10 Score=105.53 Aligned_cols=81 Identities=20% Similarity=0.299 Sum_probs=70.2
Q ss_pred ceEEEEEecCCCcccEEEEeccCCCCCcccEEEEEecCCChhcccCccccCCeeeecCCeecCCCCHHHHHHHHHc--CC
Q psy2533 91 MKSHSVRDMLRQEAKLSEMSEEGAGQDRLGIYIKSVVKGGAADANGRLQAGDQLLKVDGQSLVGITQEKAAEYLVR--TG 168 (684)
Q Consensus 91 ~~~V~v~k~~~~GLGfsI~GG~~~~~~~~gIfIs~V~pGGpA~r~GrLqvGDrILaVNG~sl~g~sh~eAV~lLk~--sg 168 (684)
...+.+ .+...+|||+|.+. ..+++|..|.++|||+++|+|++||+|++|||.++.+.+|.+++.+|+. .+
T Consensus 28 ~~~~~l-~k~~~glG~~i~~~------~~~v~V~~V~~gspA~~aG~L~~GD~Il~VnG~~v~~~s~~d~~~~l~~~~~G 100 (126)
T 1wif_A 28 VIQTKL-TVGNLGLGLVVIQN------GPYLQISHLINKGAAASDGILQPGDVLISVGHANVLGYTLREFLKLLQNITIG 100 (126)
T ss_dssp EEEEEE-ECCTTCCCCCEEEE------TTEEEECCCCTTSSGGGCSSSCTTCBEEEESSSCCTTCCHHHHHHHHTSCCSS
T ss_pred eEEEEE-ecCCceEeEEEEcC------CCcEEEEEECCCCHHHHcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCC
Confidence 334444 45678999999863 2379999999999999999999999999999999999999999999997 47
Q ss_pred CEEEEEEEec
Q psy2533 169 PIVTLEIAKQ 178 (684)
Q Consensus 169 ~~V~LvV~R~ 178 (684)
..|.|+|.|.
T Consensus 101 ~~v~l~V~R~ 110 (126)
T 1wif_A 101 TVLQIKAYRG 110 (126)
T ss_dssp CEEEEEEESS
T ss_pred CEEEEEEEEC
Confidence 8899999987
No 148
>2edv_A FERM and PDZ domain-containing protein 1; cytoskeletal-associated protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.11 E-value=4.9e-11 Score=104.02 Aligned_cols=81 Identities=17% Similarity=0.278 Sum_probs=70.3
Q ss_pred CceEEEEEecCC-CcccEEEEeccCCCCCcccEEEEEecCCChhcccCccccCCeeeecCCeecCCCCHHHHHHHHHcCC
Q psy2533 90 SMKSHSVRDMLR-QEAKLSEMSEEGAGQDRLGIYIKSVVKGGAADANGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTG 168 (684)
Q Consensus 90 ~~~~V~v~k~~~-~GLGfsI~GG~~~~~~~~gIfIs~V~pGGpA~r~GrLqvGDrILaVNG~sl~g~sh~eAV~lLk~sg 168 (684)
..++|.+.+... .+|||.|.+ ..+++|..|.++|||+ .| |++||+|++|||.++.+++|.+++.+++..+
T Consensus 8 ~~~~v~l~~~~~~~~~G~~l~~-------~~~~~V~~V~~~spA~-ag-L~~GD~Il~ing~~v~~~~~~~~~~~~~~~g 78 (96)
T 2edv_A 8 VRHTVKIDKDTLLQDYGFHISE-------SLPLTVVAVTAGGSAH-GK-LFPGDQILQMNNEPAEDLSWERAVDILREAE 78 (96)
T ss_dssp EEEEEEECCCSSSCSCSBCCCS-------SSSCBCCCBCSSSSST-TT-SCTTCBEEEESSCBSTTCCHHHHHHHHHHCS
T ss_pred ccEEEEEEECCCCCcccEEEec-------CCCeEEEEECCCCchh-hC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 356677766664 489999975 2479999999999995 66 9999999999999999999999999999989
Q ss_pred CEEEEEEEecC
Q psy2533 169 PIVTLEIAKQG 179 (684)
Q Consensus 169 ~~V~LvV~R~~ 179 (684)
..|.|+|.|..
T Consensus 79 ~~v~l~v~R~~ 89 (96)
T 2edv_A 79 DSLSITVVRCT 89 (96)
T ss_dssp SCEEEEEEECC
T ss_pred CeEEEEEEECC
Confidence 99999999976
No 149
>3r0h_A INAD, inactivation-NO-after-potential D protein; protein-protein complex, PDZ domain, peptide binding protein; 2.60A {Drosophila melanogaster}
Probab=99.10 E-value=2.2e-10 Score=111.34 Aligned_cols=83 Identities=20% Similarity=0.343 Sum_probs=72.1
Q ss_pred EEEEEecCCCcccEEEEeccCCCCCcccEEEEEecCCChhcccCccccCCeeeecCCeecCCCCHHHHHHHHHcCCCEEE
Q psy2533 93 SHSVRDMLRQEAKLSEMSEEGAGQDRLGIYIKSVVKGGAADANGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGPIVT 172 (684)
Q Consensus 93 ~V~v~k~~~~GLGfsI~GG~~~~~~~~gIfIs~V~pGGpA~r~GrLqvGDrILaVNG~sl~g~sh~eAV~lLk~sg~~V~ 172 (684)
++.+.+....+|||++.++. .++||..|.+||||+++|+|++||+|++|||+++.+++|.+++.+|+..+..|.
T Consensus 116 ~v~l~~~~~~~lG~~~~~~~------~gv~V~~V~~gs~A~~aG~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~~v~ 189 (206)
T 3r0h_A 116 NVDLMKKAGKELGLSLSPNE------IGCTIADLIQGQYPEIDSKLQRGDIITKFNGDALEGLPFQVCYALFKGANGKVS 189 (206)
T ss_dssp EEEEECCTTCCCCEEEEECS------SCEEEEEECTTSCHHHHHHCCTTCEEEEETTEECTTCCHHHHHHHHHTCCSEEE
T ss_pred EEEEecCCCCccCeEEEcCC------ceEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEE
Confidence 34444555678999998542 479999999999999999999999999999999999999999999999999999
Q ss_pred EEEEecCcc
Q psy2533 173 LEIAKQGAI 181 (684)
Q Consensus 173 LvV~R~~~~ 181 (684)
|+|.|..+.
T Consensus 190 L~V~R~~~~ 198 (206)
T 3r0h_A 190 MEVTRPKPT 198 (206)
T ss_dssp EEEEEECCC
T ss_pred EEEEeCCCC
Confidence 999997643
No 150
>1uez_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.10 E-value=1e-10 Score=102.31 Aligned_cols=87 Identities=28% Similarity=0.443 Sum_probs=71.8
Q ss_pred CCceEEEEEec-CCCcccEEEEeccCCCCCcccEEEEEecCCChhcccCccccCCeeeecCCeecCCCCHHHHHHHHHcC
Q psy2533 89 SSMKSHSVRDM-LRQEAKLSEMSEEGAGQDRLGIYIKSVVKGGAADANGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRT 167 (684)
Q Consensus 89 s~~~~V~v~k~-~~~GLGfsI~GG~~~~~~~~gIfIs~V~pGGpA~r~GrLqvGDrILaVNG~sl~g~sh~eAV~lLk~s 167 (684)
...+.+.+.+. ...+|||+|.++.+.. .+++|..|.+++||+++| |++||+|++|||.++.++++.+++.+++..
T Consensus 7 ~~~~~v~l~~~~~~~~lG~~~~~~~~~~---~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~~~~~ 82 (101)
T 1uez_A 7 GEVRLVSLRRAKAHEGLGFSIRGGSEHG---VGIYVSLVEPGSLAEKEG-LRVGDQILRVNDKSLARVTHAEAVKALKGS 82 (101)
T ss_dssp CCCEEECCCCCCTTTCSSEEEEECTTTT---CCEEEEEECTTSHHHHHT-CCSSCCEEEETTEECSSCCHHHHHHHSSSS
T ss_pred CccEEEEEEECCCCCcccEEEeCCCCCC---CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCcCHHHHHHhhcCC
Confidence 44566666553 5679999999875432 479999999999999999 999999999999999999998888877654
Q ss_pred CCEEEEEEEecCc
Q psy2533 168 GPIVTLEIAKQGA 180 (684)
Q Consensus 168 g~~V~LvV~R~~~ 180 (684)
..|.|+|.|...
T Consensus 83 -~~v~l~v~R~g~ 94 (101)
T 1uez_A 83 -KKLVLSVYSAGR 94 (101)
T ss_dssp -SSCCEEECCCCC
T ss_pred -CeEEEEEEECCc
Confidence 578899987653
No 151
>1uf1_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.09 E-value=6.6e-10 Score=101.44 Aligned_cols=87 Identities=28% Similarity=0.405 Sum_probs=73.7
Q ss_pred CceEEEEEecCCCcccEEEEeccCCCCCcccEEEEEecCCChhcccCccccCCeeeecCCeecCCCCHHHHHHHHHcCCC
Q psy2533 90 SMKSHSVRDMLRQEAKLSEMSEEGAGQDRLGIYIKSVVKGGAADANGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGP 169 (684)
Q Consensus 90 ~~~~V~v~k~~~~GLGfsI~GG~~~~~~~~gIfIs~V~pGGpA~r~GrLqvGDrILaVNG~sl~g~sh~eAV~lLk~sg~ 169 (684)
..+++.+......+|||.+.++... ..+++|..|.++|||+++| |++||+|++|||.++.++++.+++..++.. .
T Consensus 20 ~~~~v~v~~~~~~~lG~~~~~~~~~---~~gv~V~~V~~~spA~~aG-L~~GD~I~~vng~~v~~~~~~~~~~~~~~~-~ 94 (128)
T 1uf1_A 20 DEKKVNLVLGDGRSLGLTIRGGAEY---GLGIYITGVDPGSEAEGSG-LKVGDQILEVNGRSFLNILHDEAVRLLKSS-R 94 (128)
T ss_dssp SEEEEEEECCSSCCCCEEEECCTTT---TCCCEEEEECTTCHHHHHT-CCTTCEEEEETTEECSSCCHHHHHHHHTTC-S
T ss_pred cEEEEEEEECCCCccCEEEECcccC---CCCEEEEEECCCCHHHHCC-CCCCCEEEEECCEECCCCCHHHHHHHHhcC-C
Confidence 4566777666567899999986432 2479999999999999999 999999999999999999999999988775 6
Q ss_pred EEEEEEEecCcc
Q psy2533 170 IVTLEIAKQGAI 181 (684)
Q Consensus 170 ~V~LvV~R~~~~ 181 (684)
.+.|+|.|....
T Consensus 95 ~v~l~v~R~g~~ 106 (128)
T 1uf1_A 95 HLILTVKDVGRL 106 (128)
T ss_dssp EEEEEEECCSCC
T ss_pred eEEEEEEECCcc
Confidence 899999997754
No 152
>2yuy_A RHO GTPase activating protein 21; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.07 E-value=7.4e-11 Score=107.76 Aligned_cols=89 Identities=21% Similarity=0.335 Sum_probs=72.9
Q ss_pred CceEEEEEecCCCcccEEEEecc-----------------------CCC--CCcccEEEEEecCCChhcccCccccCCee
Q psy2533 90 SMKSHSVRDMLRQEAKLSEMSEE-----------------------GAG--QDRLGIYIKSVVKGGAADANGRLQAGDQL 144 (684)
Q Consensus 90 ~~~~V~v~k~~~~GLGfsI~GG~-----------------------~~~--~~~~gIfIs~V~pGGpA~r~GrLqvGDrI 144 (684)
..++|.|.| ...||||+|.+.. ... ....+++|..|.+++||+++| |++||+|
T Consensus 8 ~~r~v~l~r-~~~g~Gf~l~~~t~y~~~~~~~~~~~~~~~G~~~G~~~~~~~~~~gv~V~~V~~~spA~~aG-L~~GD~I 85 (126)
T 2yuy_A 8 GPKTVTLKR-TSQGFGFTLRHFIVYPPESAIQFSYKDEENGNRGGKQRNRLEPMDTIFVKQVKEGGPAFEAG-LCTGDRI 85 (126)
T ss_dssp SCCCEEEEC-CSSSCSCCBCCCCCCCCSSCCCSCSSSCCCCSCCCTTSCCCCCCCCCCBCCCCSSSHHHHHT-CCSSCCC
T ss_pred CCEEEEEEE-CCCCcceeecCccccCCHHHHHHHHHhhcCcceeceeeecccCCCCEEEEEECCCChHHHcC-CCCCCEE
Confidence 345677765 4578999998521 000 012469999999999999999 9999999
Q ss_pred eecCCeecCCCCHHHHHHHHHcCCCEEEEEEEecCc
Q psy2533 145 LKVDGQSLVGITQEKAAEYLVRTGPIVTLEIAKQGA 180 (684)
Q Consensus 145 LaVNG~sl~g~sh~eAV~lLk~sg~~V~LvV~R~~~ 180 (684)
++|||.++.+++|.+++.+|+..+..|.|+|.|...
T Consensus 86 ~~ing~~v~~~~~~~~~~~l~~~g~~v~l~v~r~~~ 121 (126)
T 2yuy_A 86 IKVNGESVIGKTYSQVIALIQNSDTTLELSVMPKDS 121 (126)
T ss_dssp CEETTEECSSCCHHHHHHHHHTCTTEEEEECCCCCC
T ss_pred EEECCEECCCCCHHHHHHHHHcCCCEEEEEEEECCC
Confidence 999999999999999999999999999999988653
No 153
>3tsv_A Tight junction protein ZO-1; PDZ, scaffolding, JAM, cell adhesion; 1.99A {Homo sapiens} PDB: 3shu_A
Probab=99.06 E-value=5.9e-10 Score=102.08 Aligned_cols=79 Identities=25% Similarity=0.435 Sum_probs=69.4
Q ss_pred EecCCCcccEEEEeccCCCCCcccEEEEEecCCChhcccCccccCCeeeecCCeecCCCCHHHHHHHHHc--CCCEEEEE
Q psy2533 97 RDMLRQEAKLSEMSEEGAGQDRLGIYIKSVVKGGAADANGRLQAGDQLLKVDGQSLVGITQEKAAEYLVR--TGPIVTLE 174 (684)
Q Consensus 97 ~k~~~~GLGfsI~GG~~~~~~~~gIfIs~V~pGGpA~r~GrLqvGDrILaVNG~sl~g~sh~eAV~lLk~--sg~~V~Lv 174 (684)
...+..+|||.+.++.+ .+++|..|.|+|||+++| |++||+|++|||.++.++++.+++.+|+. .+..|.|+
T Consensus 34 ~~~~~~~lG~~l~~~~~-----~gv~V~~V~~gspA~~aG-L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~g~~v~l~ 107 (124)
T 3tsv_A 34 KFRKGDSVGLRLAGGND-----VGIFVAGVLEDSPAAKEG-LEEGDQILRVNNVDFTNIIREEAVLFLLDLPKGEEVTIL 107 (124)
T ss_dssp EEECSSCCCEEEEECTT-----SCEEEEEECTTCHHHHTT-CCTTEEEEEETTEECSSCCHHHHHHHHHHSCTTCEEEEE
T ss_pred EcCCCCceeEEEecCCC-----CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhcCCCCEEEEE
Confidence 33456899999998644 479999999999999999 99999999999999999999999998884 67899999
Q ss_pred EEecCcc
Q psy2533 175 IAKQGAI 181 (684)
Q Consensus 175 V~R~~~~ 181 (684)
|.|....
T Consensus 108 v~R~~~~ 114 (124)
T 3tsv_A 108 AQKKKDV 114 (124)
T ss_dssp EEECHHH
T ss_pred EEECCch
Confidence 9997654
No 154
>1ujv_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics, KIAA0705 protein; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.06 E-value=1.5e-09 Score=94.84 Aligned_cols=81 Identities=15% Similarity=0.257 Sum_probs=67.0
Q ss_pred CceEEEEEecCCCcccEEEEeccCCCCCcccEEEEEecCCChhcccCccccCCeeeecCCeecCCCCHHHHHHHHHcC--
Q psy2533 90 SMKSHSVRDMLRQEAKLSEMSEEGAGQDRLGIYIKSVVKGGAADANGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRT-- 167 (684)
Q Consensus 90 ~~~~V~v~k~~~~GLGfsI~GG~~~~~~~~gIfIs~V~pGGpA~r~GrLqvGDrILaVNG~sl~g~sh~eAV~lLk~s-- 167 (684)
....+.+.+ ...||||+|.+.. .+++|..|.++ |+..| |++||+|++|||.++.+++|.+++.+|+..
T Consensus 10 ~~~~v~l~~-~~~g~G~~i~~~~------~Gv~V~~v~~~--a~~aG-L~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~ 79 (96)
T 1ujv_A 10 ELMTLTIVK-GAQGFGFTIADSP------TGQRVKQILDI--QGCPG-LCEGDLIVEINQQNVQNLSHTEVVDILKDCPI 79 (96)
T ss_dssp CCEEEEEEC-CSSSSSEEEEEET------TEEEEEEESCG--GGSTT-CCSSCEEEEETTEECSSCCHHHHHHHHHHSCT
T ss_pred eEEEEEEEe-CCCceeEEEEcCC------CCEEEEEEecc--cccCC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCC
Confidence 345566654 5689999997532 26999999983 66777 999999999999999999999999999984
Q ss_pred CCEEEEEEEecCc
Q psy2533 168 GPIVTLEIAKQGA 180 (684)
Q Consensus 168 g~~V~LvV~R~~~ 180 (684)
+..|.|+|.|...
T Consensus 80 g~~v~l~v~R~g~ 92 (96)
T 1ujv_A 80 GSETSLIIHRGSG 92 (96)
T ss_dssp TSEEEEEEECCSS
T ss_pred CCEEEEEEEECCC
Confidence 6899999998753
No 155
>2rcz_A Tight junction protein ZO-1; PDZ, domain-swapping, cell junction, membrane, phosphorylati domain, protein binding; 1.70A {Homo sapiens} PDB: 2jwe_A 2osg_A
Probab=99.05 E-value=7.3e-10 Score=91.95 Aligned_cols=74 Identities=22% Similarity=0.380 Sum_probs=65.3
Q ss_pred EEecCCCcccEEEEeccCCCCCcccEEEEEecCCChhcccCccccCCeeeecCCeecCCCCHHHHHHHHHcCCCEEEEEE
Q psy2533 96 VRDMLRQEAKLSEMSEEGAGQDRLGIYIKSVVKGGAADANGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGPIVTLEI 175 (684)
Q Consensus 96 v~k~~~~GLGfsI~GG~~~~~~~~gIfIs~V~pGGpA~r~GrLqvGDrILaVNG~sl~g~sh~eAV~lLk~sg~~V~LvV 175 (684)
+.......|||.+.+ +++|..|.++|||+++|+|++||+|++|||.++.++++.++..+|+..+..+.|+|
T Consensus 7 ~~~~~~~~~g~~~~~---------gv~V~~v~~~s~A~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v~l~v 77 (81)
T 2rcz_A 7 VKSRKNEEYGLRLAS---------HIFVKEISQDSLAARDGNIQEGDVVLKINGTVTENMSLTDAKTLIERSKGKLKMVV 77 (81)
T ss_dssp ECCSTTCCCCEEEEE---------EEEEEEECTTSHHHHHSSCCTTCEEEEETTEECTTCCHHHHHHHHHTSTTEEEEEE
T ss_pred EECCCCCCCCEEEeC---------CEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHCCCCeEEEEE
Confidence 344567789998862 69999999999999999999999999999999999999999999998878899999
Q ss_pred Eec
Q psy2533 176 AKQ 178 (684)
Q Consensus 176 ~R~ 178 (684)
.|.
T Consensus 78 ~R~ 80 (81)
T 2rcz_A 78 QRD 80 (81)
T ss_dssp EC-
T ss_pred EeC
Confidence 774
No 156
>1whd_A RGS3, regulator of G-protein signaling 3; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, signaling protein; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.05 E-value=3.1e-10 Score=99.50 Aligned_cols=74 Identities=15% Similarity=0.167 Sum_probs=66.2
Q ss_pred ecCCCcccEEEEeccCCCCCcccEEEEEecCCChhcccCccccCCeeeecCCeecCCCCHHHHHHHHHcCCCEEEEEEEe
Q psy2533 98 DMLRQEAKLSEMSEEGAGQDRLGIYIKSVVKGGAADANGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGPIVTLEIAK 177 (684)
Q Consensus 98 k~~~~GLGfsI~GG~~~~~~~~gIfIs~V~pGGpA~r~GrLqvGDrILaVNG~sl~g~sh~eAV~lLk~sg~~V~LvV~R 177 (684)
.+...+|||.+.+. .+++|..|.+++||+++| |++||+|++|||.++.++++.+++.+|+..+..|.|+|.|
T Consensus 22 ~~~~~g~G~~~~~~-------~~~~V~~V~~~spA~~aG-L~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~~v~l~v~R 93 (100)
T 1whd_A 22 RRGKDGFGFTICCD-------SPVRVQAVDSGGPAERAG-LQQLDTVLQLNERPVEHWKCVELAHEIRSCPSEIILLVWR 93 (100)
T ss_dssp ECCSSSSSCBCCCS-------SSCBCCBCCTTSHHHHHT-CCSSCEEEEETTEECTTCCHHHHHHHHHHCSSEEEEEEEE
T ss_pred ECCCCeeeEEEeCC-------CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEE
Confidence 34567899998753 368999999999999999 9999999999999999999999999999888889999988
Q ss_pred cC
Q psy2533 178 QG 179 (684)
Q Consensus 178 ~~ 179 (684)
..
T Consensus 94 ~~ 95 (100)
T 1whd_A 94 VS 95 (100)
T ss_dssp CC
T ss_pred CC
Confidence 75
No 157
>3kzd_A TIAM-1, T-lymphoma invasion and metastasis-inducing prote; PDZ, cell junction, cell adhesion, signaling protein, nucleotide exchange factor; 1.30A {Homo sapiens} PDB: 3kze_A
Probab=99.05 E-value=8.8e-10 Score=97.39 Aligned_cols=85 Identities=21% Similarity=0.313 Sum_probs=68.3
Q ss_pred CceEEEEEecCC--CcccEEEEeccCCCCCcccEEEEEecCCChhcccCccccCCeeeecCCeecCCCCHHHHHHHHHcC
Q psy2533 90 SMKSHSVRDMLR--QEAKLSEMSEEGAGQDRLGIYIKSVVKGGAADANGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRT 167 (684)
Q Consensus 90 ~~~~V~v~k~~~--~GLGfsI~GG~~~~~~~~gIfIs~V~pGGpA~r~GrLqvGDrILaVNG~sl~g~sh~eAV~lLk~s 167 (684)
..+.+.+.|... .+|||+|.++... +..+++|..|.++|||+++| |++||+|++|||.++.++++.++..++++
T Consensus 6 ~~~~v~i~k~~~~~~~~Gf~v~~~~~~--~~~g~~V~~V~~~spA~~aG-L~~GD~Il~vng~~v~~~~~~~l~~~l~~- 81 (94)
T 3kzd_A 6 VTHSIHIEKSDTAADTYGFSLSSVEED--GIRRLYVNSVKETGLASKKG-LKAGDEILEINNRAADALNSSMLKDFLSQ- 81 (94)
T ss_dssp EEEEEEEEC------CCSEEEEEECSS--SSCEEEEEEECTTSHHHHTT-CCTTCEEEEETTEEGGGCCHHHHHHHHHS-
T ss_pred ceeEEEEEeCCCCcCCcCEEEEecCCC--CcCCeEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHhC-
Confidence 356677777653 4899999875432 23589999999999999999 99999999999999999999999999974
Q ss_pred CCEEEEEEEecC
Q psy2533 168 GPIVTLEIAKQG 179 (684)
Q Consensus 168 g~~V~LvV~R~~ 179 (684)
..++|+|..-+
T Consensus 82 -~~l~ltV~~~p 92 (94)
T 3kzd_A 82 -PSLGLLVRTYP 92 (94)
T ss_dssp -SEEEEEEEECC
T ss_pred -CeEEEEEEecC
Confidence 56888886643
No 158
>2d8i_A T-cell lymphoma invasion and metastasis 1 variant; PDZ domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.04 E-value=4.2e-10 Score=102.14 Aligned_cols=87 Identities=20% Similarity=0.287 Sum_probs=72.7
Q ss_pred CceEEEEEecCCC--cccEEEEeccCCCCCcccEEEEEecCCChhcccCccccCCeeeecCCeecCCCCHHHHHHHHHcC
Q psy2533 90 SMKSHSVRDMLRQ--EAKLSEMSEEGAGQDRLGIYIKSVVKGGAADANGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRT 167 (684)
Q Consensus 90 ~~~~V~v~k~~~~--GLGfsI~GG~~~~~~~~gIfIs~V~pGGpA~r~GrLqvGDrILaVNG~sl~g~sh~eAV~lLk~s 167 (684)
..+.+.+.+.... +|||+|.+.... +..+++|..|.+++||+++| |++||+|++|||.++.++++.+++.+|+..
T Consensus 15 ~~~~v~l~k~~~~~~~~G~~v~~~~~~--~~~gv~V~~V~~~spA~~aG-L~~GD~Il~Ing~~v~~~~~~~~~~~l~~~ 91 (114)
T 2d8i_A 15 VTQSIHIEKSDTAADTYGFSLSSVEED--GIRRLYVNSVKETGLASKKG-LKAGDEILEINNRAADALNSSMLKDFLSQP 91 (114)
T ss_dssp EEEEEEEECSCTTTCCCCCEEEEEEET--TEEEEEEEECCTTSSHHHHT-CCTTCCEEEESSCBGGGCCHHHHHHHHTSS
T ss_pred ceEEEEEEeCCCCccccCEEEEecCcC--CcCCEEEEEeCCCCHHHHcC-CCCCCEEEEECCEECCCcCHHHHHHHHhCC
Confidence 4567777777664 799999875432 12479999999999999999 999999999999999999999999999853
Q ss_pred CCEEEEEEEecCcc
Q psy2533 168 GPIVTLEIAKQGAI 181 (684)
Q Consensus 168 g~~V~LvV~R~~~~ 181 (684)
.+.|+|.|.+..
T Consensus 92 --~v~l~v~R~p~~ 103 (114)
T 2d8i_A 92 --SLGLLVRTYPEL 103 (114)
T ss_dssp --EEEEEEEECCCS
T ss_pred --cEEEEEEECCCC
Confidence 899999987643
No 159
>1b8q_A Protein (neuronal nitric oxide synthase); PDZ domain, NNOS, nitric oxide synthase, oxidoreductase; NMR {Rattus norvegicus} SCOP: b.36.1.1
Probab=99.04 E-value=6.2e-10 Score=101.31 Aligned_cols=89 Identities=21% Similarity=0.256 Sum_probs=76.4
Q ss_pred CCceEEEEEecCCCcccEEEEeccCCCCCcccEEEEEecCCChhcccCccccCCeeeecCCeecCCCCHHHHHHHHHcC-
Q psy2533 89 SSMKSHSVRDMLRQEAKLSEMSEEGAGQDRLGIYIKSVVKGGAADANGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRT- 167 (684)
Q Consensus 89 s~~~~V~v~k~~~~GLGfsI~GG~~~~~~~~gIfIs~V~pGGpA~r~GrLqvGDrILaVNG~sl~g~sh~eAV~lLk~s- 167 (684)
...+.|.+.+....+|||.+.++.+ ..+++|..|.++|||+++|.|++||+|++|||.++.++++.++..+|+..
T Consensus 7 ~~~~~v~l~~~~~~glG~~~~~~~~----~~~~~V~~V~~~spA~~aGll~~GD~I~~ing~~v~~~~~~~~~~~l~~~~ 82 (127)
T 1b8q_A 7 PNVISVRLFKRKVGGLGFLVKERVS----KPPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDSALEVLRGIA 82 (127)
T ss_dssp CCSEEEEEECTTTSCCSCCEEECTT----SSCEEECCCSSSSSHHHHSSCCTTTCCCEETTEECSSSCHHHHHHHHHSCC
T ss_pred CceEEEEEEeCCCCcEeEEEEecCC----CCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC
Confidence 3466788887777899999987543 34799999999999999994499999999999999999999999999875
Q ss_pred CCEEEEEEEecCcc
Q psy2533 168 GPIVTLEIAKQGAI 181 (684)
Q Consensus 168 g~~V~LvV~R~~~~ 181 (684)
+..+.|+|.|....
T Consensus 83 g~~v~l~v~R~g~~ 96 (127)
T 1b8q_A 83 SETHVVLILRGPEG 96 (127)
T ss_dssp SSCEEEEEECCCCS
T ss_pred CCeEEEEEEeCCce
Confidence 57899999998654
No 160
>2vsv_A Rhophilin-2; scaffold protein, RHO GTPase binding, protein-binding, RHOB, nitration, cytoplasm, PDZ domain, CAsp8; 1.82A {Homo sapiens}
Probab=99.03 E-value=4.7e-10 Score=101.10 Aligned_cols=81 Identities=10% Similarity=0.068 Sum_probs=70.2
Q ss_pred CceEEEEEecCCCcccEEEEeccCCCCCcccEEEEEecCCChhcccCccccCCeeeecCCeecCCCCHHHHHHHHHcCCC
Q psy2533 90 SMKSHSVRDMLRQEAKLSEMSEEGAGQDRLGIYIKSVVKGGAADANGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGP 169 (684)
Q Consensus 90 ~~~~V~v~k~~~~GLGfsI~GG~~~~~~~~gIfIs~V~pGGpA~r~GrLqvGDrILaVNG~sl~g~sh~eAV~lLk~sg~ 169 (684)
..++|.+.| ...+|||.+.+. .+++|..|.++|||+++| |++||+|++|||.++.++++.+++.+|+..++
T Consensus 23 ~~r~v~l~k-~~~~~G~~l~~~-------~~v~V~~V~~gspA~~AG-L~~GD~Il~VnG~~v~~~~~~dv~~~i~~~~~ 93 (109)
T 2vsv_A 23 MPRSIRFTA-EEGDLGFTLRGN-------APVQVHFLDPYCSASVAG-AREGDYIVSIQLVDCKWLTLSEVMKLLKSFGE 93 (109)
T ss_dssp SCEEEEECC-GGGCCCEEEESS-------SSCEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHHHTTTT
T ss_pred CCEEEEEEe-CCCceeEEEeCC-------CCeEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCC
Confidence 456777766 568999999753 368999999999999999 99999999999999999999999999998876
Q ss_pred E-EEEEEEecC
Q psy2533 170 I-VTLEIAKQG 179 (684)
Q Consensus 170 ~-V~LvV~R~~ 179 (684)
. |.|+|.|..
T Consensus 94 ~~v~l~V~~~~ 104 (109)
T 2vsv_A 94 DEIEMKVVSLL 104 (109)
T ss_dssp SCEEEEEESCC
T ss_pred CeEEEEEEECC
Confidence 5 999998764
No 161
>2eaq_A LIM domain only protein 7; conserved hypothetical protein, structural genomics, NPPSFA; 1.46A {Homo sapiens}
Probab=99.01 E-value=1.1e-09 Score=93.35 Aligned_cols=80 Identities=15% Similarity=0.267 Sum_probs=67.1
Q ss_pred EEEEEecCCC--cccEEEEeccCCCCCcccEEEEEecCCChhcccCccccCCeeeecCCeecCCCCHHHHHHHHHc--CC
Q psy2533 93 SHSVRDMLRQ--EAKLSEMSEEGAGQDRLGIYIKSVVKGGAADANGRLQAGDQLLKVDGQSLVGITQEKAAEYLVR--TG 168 (684)
Q Consensus 93 ~V~v~k~~~~--GLGfsI~GG~~~~~~~~gIfIs~V~pGGpA~r~GrLqvGDrILaVNG~sl~g~sh~eAV~lLk~--sg 168 (684)
.+.+.+.++. +|||.+... ..+++|..|.++|||+++| |++||+|++|||.++.+.++.++..+|+. .+
T Consensus 6 ~~~~~~~~~~~~~lG~~~~~~------~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~g 78 (90)
T 2eaq_A 6 RISINQTPGKSLDFGFTIKWD------IPGIFVASVEAGSPAEFSQ-LQVDDEIIAINNTKFSYNDSKEWEEAMAKAQET 78 (90)
T ss_dssp EEEEECCTTCSSCCSEEEEEE------TTEEEEEEECTTSHHHHTT-CCTTCEEEEETTEECCTTCHHHHHHHHHHHHHH
T ss_pred EEEEEecCCCCCcccEEEEec------CCCEEEEEECCCChHHHcC-CCCCCEEEEECCEEccCCCHHHHHHHHHhcCCC
Confidence 4555555544 799998743 2379999999999999999 99999999999999988899999999985 47
Q ss_pred CEEEEEEEecC
Q psy2533 169 PIVTLEIAKQG 179 (684)
Q Consensus 169 ~~V~LvV~R~~ 179 (684)
..|.|+|.|..
T Consensus 79 ~~v~l~v~R~g 89 (90)
T 2eaq_A 79 GHLVMDVRRYG 89 (90)
T ss_dssp TEEEEEEEEEC
T ss_pred CEEEEEEEeCC
Confidence 89999998864
No 162
>3cyy_A Tight junction protein ZO-1; protein-ligand complex, cell junction, membrane, phosphoprot domain, tight junction, transmembrane; 2.40A {Homo sapiens}
Probab=98.99 E-value=1.9e-09 Score=92.10 Aligned_cols=79 Identities=18% Similarity=0.308 Sum_probs=66.5
Q ss_pred EEEEEe-cCCCcccEEEEeccCCCCCcccEEEEEecCCChhcccCccccCCeeeecCCeecCCCCHHHHHHHHHcCCCEE
Q psy2533 93 SHSVRD-MLRQEAKLSEMSEEGAGQDRLGIYIKSVVKGGAADANGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGPIV 171 (684)
Q Consensus 93 ~V~v~k-~~~~GLGfsI~GG~~~~~~~~gIfIs~V~pGGpA~r~GrLqvGDrILaVNG~sl~g~sh~eAV~lLk~sg~~V 171 (684)
.+.+.. .....|||.+. .+++|..|.++|||+++|+|++||+|++|||.++.++++.++..+|+..+..+
T Consensus 5 ~v~~~~~~~~~~~g~~~~---------~gv~V~~v~~~s~A~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v 75 (92)
T 3cyy_A 5 KVTLVKSAKNEEYGLRLA---------SHIFVKEISQDSLAARDGNIQEGDVVLKINGTVTENMSLTDAKTLIERSKGKL 75 (92)
T ss_dssp EEEEECSSTTSCCCEEEE---------EEEEEEEECTTCHHHHSCCCCTTCEEEEETTEECTTCCHHHHHHHHHTTTTEE
T ss_pred EEEEEeCCCCCCCCEEEe---------CCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCcE
Confidence 344443 34568999886 26999999999999999999999999999999999999999999999888899
Q ss_pred EEEEEecCc
Q psy2533 172 TLEIAKQGA 180 (684)
Q Consensus 172 ~LvV~R~~~ 180 (684)
.|+|.|...
T Consensus 76 ~l~v~r~g~ 84 (92)
T 3cyy_A 76 KMVVQRDER 84 (92)
T ss_dssp EEEEEC---
T ss_pred EEEEEeCCc
Confidence 999988764
No 163
>1ky9_A Protease DO, DEGP, HTRA; protein quality control, serine protease, trypsin, chaperone, PDZ, ATP-independent, temperature-regulated, periplasm; 2.80A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3ou0_A 4a8d_A 3otp_A 3mh7_A 3mh4_A 3mh5_A* 3mh6_A* 3cs0_A 2zle_A
Probab=98.98 E-value=1e-10 Score=128.54 Aligned_cols=153 Identities=17% Similarity=0.275 Sum_probs=52.8
Q ss_pred ccEEEEEecCCChhcccCccccCCeeeecCCeecCCCCHHHHHHHHHc--CCCEEEEEEEecCccccccccccCCCCCcc
Q psy2533 119 LGIYIKSVVKGGAADANGRLQAGDQLLKVDGQSLVGITQEKAAEYLVR--TGPIVTLEIAKQGAIYHGLATLLSQPSPVM 196 (684)
Q Consensus 119 ~gIfIs~V~pGGpA~r~GrLqvGDrILaVNG~sl~g~sh~eAV~lLk~--sg~~V~LvV~R~~~~~~~~stl~s~psP~~ 196 (684)
.|++|..|.+++||+++| |++||+|++|||..+.+. .+...+|.. .+..|.|+|.|.........++... +..
T Consensus 286 ~G~~V~~V~~gspA~~AG-L~~GDvI~~inG~~v~~~--~~l~~~l~~~~~g~~v~l~v~R~g~~~~~~v~~~~~--~~~ 360 (448)
T 1ky9_A 286 RGAFVSQVLPNSSAAKAG-IKAGDVITSLNGKPISSF--AALRAQVGTMPVGSKLTLGLLRDGKQVNVNLELQQS--SQN 360 (448)
T ss_dssp CSEECCCCTTCSSSTTTT-CCTTCEECBSSSSBCCSS--HHHHHHTTSSBTTCCCEEEEESSSCEEECCCC---------
T ss_pred CceEEEEeccCCHHHHcC-CCCCCEEEEECCEEcCCH--HHHHHHHHhcCCCCEEEEEEEECCEEEEEEEEEecC--CCc
Confidence 489999999999999999 999999999999999886 566666664 5788999999876432211111000 000
Q ss_pred ccCCCccccccccccccccccccccccCCCCCCCCCCCCCCCCCCcccccccccccCCCCCCCCCCCCCCCCCCCCCCcE
Q psy2533 197 TRGQVKTYESTISVQQRKERSSQNLHDMNNGVGGSHHPAPGPGSGMNHHPVVSRQASTPSLPQASPYPAPAPAPADPERF 276 (684)
Q Consensus 197 ~s~~~~~ses~ls~~~~~~~~sv~L~k~s~GlGfSi~~~~g~G~Gi~ikpIv~~~~~t~slp~~sl~~gs~~~~~d~GIF 276 (684)
... . ... ...-+|+.+. ++ ....|++
T Consensus 361 ----------~~~----~----~~~--~~~~~G~~l~------------~~----------------------~~~~gv~ 386 (448)
T 1ky9_A 361 ----------QVD----S----SSI--FNGIEGAEMS------------NK----------------------GKDQGVV 386 (448)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ----------ccc----c----ccc--cccccceEee------------cc----------------------CCCCeEE
Confidence 000 0 000 0000122211 00 0124677
Q ss_pred EEecc--hhhhhcCCCCCCCEEEEECCEecCCCCHHHHHHHHHhCCCeEEEEEEeCCcc
Q psy2533 277 YQNLS--VYRNQNGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGPIVTLEIAKQGAI 333 (684)
Q Consensus 277 V~sI~--GaAardGrLr~GDqIL~VNG~sl~g~Th~eAv~lLk~sg~~VtL~V~R~~~~ 333 (684)
|..|. ++|++.| |++||+|++|||+.+.+ ..+...+|+..+..|.|.|.|.+..
T Consensus 387 V~~V~~gspA~~aG-L~~GDiI~~vng~~v~~--~~~l~~~l~~~~~~v~l~v~R~g~~ 442 (448)
T 1ky9_A 387 VNNVKTGTPAAQIG-LKKGDVIIGANQQAVKN--IAELRKVLDSKPSVLALNIQRGDST 442 (448)
T ss_dssp -----------------------------------------------------------
T ss_pred EEEecCCCHHHHcC-CCCCCEEEEECCEECCC--HHHHHHHHHcCCCeEEEEEEECCEE
Confidence 87776 5677766 99999999999999985 5677888887667899999987643
No 164
>3shw_A Tight junction protein ZO-1; PDZ-SH3-GUK supramodule, cell adhesion; 2.90A {Homo sapiens}
Probab=98.98 E-value=1.1e-09 Score=121.24 Aligned_cols=83 Identities=28% Similarity=0.486 Sum_probs=73.6
Q ss_pred eEEEEEecCCCcccEEEEeccCCCCCcccEEEEEecCCChhcccCccccCCeeeecCCeecCCCCHHHHHHHHHc--CCC
Q psy2533 92 KSHSVRDMLRQEAKLSEMSEEGAGQDRLGIYIKSVVKGGAADANGRLQAGDQLLKVDGQSLVGITQEKAAEYLVR--TGP 169 (684)
Q Consensus 92 ~~V~v~k~~~~GLGfsI~GG~~~~~~~~gIfIs~V~pGGpA~r~GrLqvGDrILaVNG~sl~g~sh~eAV~lLk~--sg~ 169 (684)
+.|.+.+ +.+|||+|.||.+ .||||..|.+||||+++| |++||+|++|||.++.+++|.+++.+|+. .+.
T Consensus 3 r~V~l~k--~~~lG~~i~gg~~-----~Gi~V~~V~~gspA~~aG-L~~GD~Il~VNG~~v~~~t~~e~~~~L~~~~~g~ 74 (468)
T 3shw_A 3 KLVKFRK--GDSVGLRLAGGND-----VGIFVAGVLEDSPAAKEG-LEEGDQILRVNNVDFTNIIREEAVLFLLDLPKGE 74 (468)
T ss_dssp EEEEEEC--CSSCCEEEEEETT-----TEEEEEEECSSSHHHHTT-CCTTEEEEEETTEECTTCCHHHHHHHHHHSCTTS
T ss_pred eEEEEec--CCccceEEEccCc-----CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhcCCCC
Confidence 4566655 4899999998854 479999999999999999 99999999999999999999999999998 789
Q ss_pred EEEEEEEecCccc
Q psy2533 170 IVTLEIAKQGAIY 182 (684)
Q Consensus 170 ~V~LvV~R~~~~~ 182 (684)
.|+|+|.|.+..+
T Consensus 75 ~v~L~V~r~g~~~ 87 (468)
T 3shw_A 75 EVTILAQKKKDVY 87 (468)
T ss_dssp EEEEEEEECHHHH
T ss_pred EEEEEEEECCccc
Confidence 9999999986543
No 165
>1r6j_A Syntenin 1; PDZ, membrane protein; 0.73A {Homo sapiens} SCOP: b.36.1.1 PDB: 1nte_A 1obx_A 1oby_A
Probab=98.97 E-value=1.2e-09 Score=94.12 Aligned_cols=47 Identities=26% Similarity=0.535 Sum_probs=44.6
Q ss_pred hhhhhcCCCCCCCEEEEECCEecCCCCHHHHHHHHHhCCCeEEEEEEe
Q psy2533 282 VYRNQNGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGPIVTLEIAK 329 (684)
Q Consensus 282 GaAardGrLr~GDqIL~VNG~sl~g~Th~eAv~lLk~sg~~VtL~V~R 329 (684)
++|++.| |++||+|++|||+++.+++|++++++|+.++..|+|+|..
T Consensus 34 spA~~aG-l~~GD~Il~VNG~~v~~~~~~evv~llr~~g~~V~L~v~p 80 (82)
T 1r6j_A 34 SSAARNG-LLTEHNICEINGQNVIGLKDSQIADILSTSGTVVTITIMP 80 (82)
T ss_dssp SHHHHHT-CCSSEEEEEETTEECTTCCHHHHHHHHHHSCSEEEEEEEE
T ss_pred CHHHHcC-CCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCEEEEEEEe
Confidence 7899998 9999999999999999999999999999999999999974
No 166
>2kjd_A Sodium/hydrogen exchange regulatory cofactor NHE- RF1; PDZ domain, protein, acetylation, cell projection, disease mutation, membrane; NMR {Homo sapiens}
Probab=98.96 E-value=2.9e-09 Score=96.72 Aligned_cols=85 Identities=19% Similarity=0.294 Sum_probs=71.1
Q ss_pred CceEEEEEecCCCcccEEEEeccCCCCCcccEEEEEecCCChhcccCccccCCeeeecCCeecCCCCHHHHHHHHHcCC-
Q psy2533 90 SMKSHSVRDMLRQEAKLSEMSEEGAGQDRLGIYIKSVVKGGAADANGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTG- 168 (684)
Q Consensus 90 ~~~~V~v~k~~~~GLGfsI~GG~~~~~~~~gIfIs~V~pGGpA~r~GrLqvGDrILaVNG~sl~g~sh~eAV~lLk~sg- 168 (684)
..+.+.+.+ ...+|||.+.++.+. .+++|..|.++|||+++| |++||+|++|||.++.++++.++..+|+...
T Consensus 9 ~~r~v~l~~-~~~g~G~~l~~~~~~----~gv~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~ 82 (128)
T 2kjd_A 9 RPRLCTMKK-GPSGYGFNLHSDKSK----PGQFIRSVDPDSPAEASG-LRAQDRIVEVNGVCMEGKQHGDVVSAIRAGGD 82 (128)
T ss_dssp CCEEEEEEC-CSSSCCEEEEECSSS----CSEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHTTCS
T ss_pred CcEEEEEec-CCCcccEEEEecCCC----CCEEEEEeCCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCC
Confidence 355666665 457899999976542 379999999999999999 9999999999999999999999999999874
Q ss_pred CEEEEEEEecCc
Q psy2533 169 PIVTLEIAKQGA 180 (684)
Q Consensus 169 ~~V~LvV~R~~~ 180 (684)
..+.|+|.|...
T Consensus 83 ~~~~l~v~R~g~ 94 (128)
T 2kjd_A 83 ETKLLVVDRETD 94 (128)
T ss_dssp EEEEEEECHHHH
T ss_pred CEEEEEEEeCCc
Confidence 456788887654
No 167
>2byg_A Channel associated protein of synapse-110; DLG2, PDZ, PDZ domain, structural genomics, structural genom consortium, SGC, phosphorylation; 1.85A {Homo sapiens} SCOP: b.36.1.1
Probab=98.96 E-value=1.2e-09 Score=98.91 Aligned_cols=61 Identities=33% Similarity=0.467 Sum_probs=56.4
Q ss_pred CCCcEEEecc--hhhhhcCCCCCCCEEEEECCEecCCCCHHHHHHHHHhCCCeEEEEEEeCCc
Q psy2533 272 DPERFYQNLS--VYRNQNGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGPIVTLEIAKQGA 332 (684)
Q Consensus 272 d~GIFV~sI~--GaAardGrLr~GDqIL~VNG~sl~g~Th~eAv~lLk~sg~~VtL~V~R~~~ 332 (684)
+.|+||..|. |+|++.|+|++||+|++|||+++.++++.+++.+|+..+..|+|.|.|.+.
T Consensus 53 ~~gv~V~~V~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~g~~v~l~v~R~~~ 115 (117)
T 2byg_A 53 DNSIYVTKIIDGGAAQKDGRLQVGDRLLMVNNYSLEEVTHEEAVAILKNTSEVVYLKVGKPTT 115 (117)
T ss_dssp BCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTCCSEEEEEEEEEEE
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEeCCc
Confidence 4589999997 899999999999999999999999999999999999999999999998754
No 168
>1uhp_A Hypothetical protein KIAA1095; PDZ domain, semaphorin cytoplasmic domain associated protein, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.94 E-value=3.5e-09 Score=93.55 Aligned_cols=62 Identities=18% Similarity=0.330 Sum_probs=56.7
Q ss_pred CCCCcEEEecc--hhhhhcCCCCCCCEEEEECCEecCCCCHHHHHHHHHhCCCeEEEEEEeCCc
Q psy2533 271 ADPERFYQNLS--VYRNQNGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGPIVTLEIAKQGA 332 (684)
Q Consensus 271 ~d~GIFV~sI~--GaAardGrLr~GDqIL~VNG~sl~g~Th~eAv~lLk~sg~~VtL~V~R~~~ 332 (684)
...|+||..|. ++|++.|+|++||+|++|||+++.++++.+++.+|+..+..|.|.|.|+..
T Consensus 39 ~~~gv~V~~V~~~spA~~aggL~~GD~Il~vng~~v~~~~~~~~~~~~~~~~~~v~l~v~R~~~ 102 (107)
T 1uhp_A 39 SSEGIFVSKIVDSGPAAKEGGLQIHDRIIEVNGRDLSRATHDQAVEAFKTAKEPIVVQVLRRTS 102 (107)
T ss_dssp CSCCCEEEEECSSSHHHHTTCCCSSCEEEEETTEECTTCCHHHHHHHHHHCCSSEEEEEEECCS
T ss_pred CCCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCcEEEEEEeCCC
Confidence 35689999997 899999789999999999999999999999999999999999999998754
No 169
>1vae_A Rhophilin 2, rhophilin, RHO GTPase binding protein 2; PDZ domain, intracellular signaling cascade, signal transduction; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.93 E-value=5.3e-10 Score=100.72 Aligned_cols=80 Identities=11% Similarity=0.109 Sum_probs=68.4
Q ss_pred ceEEEEEecCCCcccEEEEeccCCCCCcccEEEEEecCCChhcccCccccCCeeeecCCeecCCCCHHHHHHHHHcCCC-
Q psy2533 91 MKSHSVRDMLRQEAKLSEMSEEGAGQDRLGIYIKSVVKGGAADANGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGP- 169 (684)
Q Consensus 91 ~~~V~v~k~~~~GLGfsI~GG~~~~~~~~gIfIs~V~pGGpA~r~GrLqvGDrILaVNG~sl~g~sh~eAV~lLk~sg~- 169 (684)
.++|.+.+ ...+|||.+.++ .+++|..|.+++||+++| |++||+|++|||.++.++++.+++.+|+..++
T Consensus 16 ~r~v~l~~-~~~~~G~~l~~~-------~~v~V~~V~~~spA~~aG-L~~GD~Il~InG~~v~~~~~~d~~~~i~~~~~~ 86 (111)
T 1vae_A 16 PRGIHFTV-EEGDLGFTLRGN-------TPVQVHFLDPHCSASLAG-AKEGDYIVSIQGVDCKWLTVSEVMKLLKSFGGE 86 (111)
T ss_dssp CCCCCEEC-CSSCCSCCEESS-------SSCEECCCCTTSSHHHHH-CCTTCEEEEETTEECSSCCHHHHHHHHHHTTTS
T ss_pred CeEEEEEc-CCCcccEEEeCC-------CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCc
Confidence 35566655 678999999753 268999999999999999 99999999999999999999999999998755
Q ss_pred EEEEEEEecC
Q psy2533 170 IVTLEIAKQG 179 (684)
Q Consensus 170 ~V~LvV~R~~ 179 (684)
.|.|+|.+..
T Consensus 87 ~v~l~V~~~~ 96 (111)
T 1vae_A 87 EVEMKVVSLL 96 (111)
T ss_dssp EECEEEECEE
T ss_pred eEEEEEEecC
Confidence 5999998764
No 170
>2qt5_A Glutamate receptor-interacting protein 1; PDZ-peptide complex, PDZ tandem, alternative splicing, cell junction, cytoplasm; 2.30A {Rattus norvegicus}
Probab=98.93 E-value=4e-09 Score=102.53 Aligned_cols=82 Identities=28% Similarity=0.352 Sum_probs=71.8
Q ss_pred cCCCcccEEEEeccCCCC-CcccEEEEEecCCChhcccCccccCCeeeecCCeecCCCCHHHHHHHHHcCCCEEEEEEEe
Q psy2533 99 MLRQEAKLSEMSEEGAGQ-DRLGIYIKSVVKGGAADANGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGPIVTLEIAK 177 (684)
Q Consensus 99 ~~~~GLGfsI~GG~~~~~-~~~gIfIs~V~pGGpA~r~GrLqvGDrILaVNG~sl~g~sh~eAV~lLk~sg~~V~LvV~R 177 (684)
+...+|||.|.+|..... ...+++|..|.++|||+++|+|++||+|++|||.++.++++.+++.+|+..+..|.|+|.|
T Consensus 114 ~~~~~lG~~l~~g~~~~~~~~~g~~V~~v~~~s~A~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v~l~v~R 193 (200)
T 2qt5_A 114 KEGNTFGFVIRGGAHDDRNKSRPVVITCVRPGGPADREGTIKPGDRLLSVDGIRLLGTTHAEAMSILKQCGQEATLLIEY 193 (200)
T ss_dssp CBTTBCSEEEEEECCSSTTTCEEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTTCSEEEEEEEE
T ss_pred cCCCCeEEEEECCCCCCccCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEE
Confidence 456789999998754221 1458999999999999999999999999999999999999999999999988899999998
Q ss_pred cCc
Q psy2533 178 QGA 180 (684)
Q Consensus 178 ~~~ 180 (684)
...
T Consensus 194 ~~~ 196 (200)
T 2qt5_A 194 DVS 196 (200)
T ss_dssp EEE
T ss_pred CCc
Confidence 754
No 171
>4amh_A Disks large homolog 1; permutation, protein folding, structural protein; 2.30A {Homo sapiens}
Probab=98.92 E-value=2.5e-09 Score=94.92 Aligned_cols=61 Identities=33% Similarity=0.488 Sum_probs=56.7
Q ss_pred CCCcEEEecc--hhhhhcCCCCCCCEEEEECCEecCCCCHHHHHHHHHhCCCeEEEEEEeCCc
Q psy2533 272 DPERFYQNLS--VYRNQNGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGPIVTLEIAKQGA 332 (684)
Q Consensus 272 d~GIFV~sI~--GaAardGrLr~GDqIL~VNG~sl~g~Th~eAv~lLk~sg~~VtL~V~R~~~ 332 (684)
+.|+||..|. ++|++.|+|++||+|++|||.++.++++.+++.+++..+..|.|.|.|++.
T Consensus 31 ~~gv~V~~V~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~v~l~v~R~~~ 93 (106)
T 4amh_A 31 DNSIYVTKIIEGGAAHKDGKLQIGDKLLAVNNVALEEVTHEEAVTALKNTSDFVYLKVAKPGS 93 (106)
T ss_dssp BCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHHSCCSEEEEEEECCSS
T ss_pred CCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHhCCCCeEEEEEEeCCC
Confidence 4589999997 799999999999999999999999999999999999999999999999764
No 172
>2i1n_A Discs, large homolog 3; DLG3, PDZ, PDZ domain, signal transduction, structural genom structural genomics consortium, SGC, signaling protein; 1.85A {Homo sapiens} PDB: 2wl7_A 3rl7_B 1rgr_A* 1kef_A 1zok_A 1iu0_A 1iu2_A
Probab=98.92 E-value=3e-09 Score=92.92 Aligned_cols=62 Identities=26% Similarity=0.441 Sum_probs=57.0
Q ss_pred CCCcEEEecc--hhhhhcCCCCCCCEEEEECCEecCCCCHHHHHHHHHhCCCeEEEEEEeCCcc
Q psy2533 272 DPERFYQNLS--VYRNQNGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGPIVTLEIAKQGAI 333 (684)
Q Consensus 272 d~GIFV~sI~--GaAardGrLr~GDqIL~VNG~sl~g~Th~eAv~lLk~sg~~VtL~V~R~~~~ 333 (684)
..|+||..|. ++|++.|.|++||+|++|||.++.++++.+++.+++..+..|.|.|.|.+..
T Consensus 33 ~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~g~~v~l~v~R~~~~ 96 (102)
T 2i1n_A 33 DPGIFITKIIPGGAAAMDGRLGVNDCVLRVNEVDVSEVVHSRAVEALKEAGPVVRLVVRRRQPP 96 (102)
T ss_dssp CCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHHHSCSEEEEEEEEECCC
T ss_pred CCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEeCCCC
Confidence 4689999997 7999999899999999999999999999999999999999999999997643
No 173
>1i16_A Interleukin 16, LCF; cytokine, lymphocyte chemoattractant factor, PDZ domain; NMR {Homo sapiens} SCOP: b.36.1.2
Probab=98.92 E-value=2.4e-09 Score=98.47 Aligned_cols=60 Identities=20% Similarity=0.283 Sum_probs=53.8
Q ss_pred CCcEEEecc--hhhhhcCCCCCCCEEEEECCEecCCCCHHHHHHHHHhCCC-eEEEEEEeCCc
Q psy2533 273 PERFYQNLS--VYRNQNGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGP-IVTLEIAKQGA 332 (684)
Q Consensus 273 ~GIFV~sI~--GaAardGrLr~GDqIL~VNG~sl~g~Th~eAv~lLk~sg~-~VtL~V~R~~~ 332 (684)
.++||..|. ++|+++|+|++||+|++|||+++.+++|++|+.+|+.++. .|.|+|.|...
T Consensus 57 ~~i~I~~V~~gs~A~~aggL~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~~v~l~v~r~~~ 119 (130)
T 1i16_A 57 KPLTINRIFKGAASEQSETVQPGDEILQLGGTAMQGLTRFEAWNIIKALPDGPVTIVIRRKSL 119 (130)
T ss_dssp CCCEEEEECSSCCCSSSCCCCTTCCEEECSSCBGGGSCHHHHHHHHHTSCSSEEEEEEEEESS
T ss_pred CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCceEEEEEEeCCC
Confidence 468999997 7899998899999999999999999999999999999865 59999988743
No 174
>3egg_C Spinophilin; PP1, serine/threonine phosphatase, post synapti density, glutametergic receptors, carbohydrate metabolism, cycle, cell division; HET: MES; 1.85A {Rattus norvegicus} PDB: 3egh_C* 3hvq_C 2fn5_A
Probab=98.92 E-value=1.7e-09 Score=104.63 Aligned_cols=59 Identities=36% Similarity=0.477 Sum_probs=55.4
Q ss_pred CCCcEEEecc--hhhhhcCCCCCCCEEEEECCEecCCCCHHHHHHHHHhCCCeEEEEEEeC
Q psy2533 272 DPERFYQNLS--VYRNQNGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGPIVTLEIAKQ 330 (684)
Q Consensus 272 d~GIFV~sI~--GaAardGrLr~GDqIL~VNG~sl~g~Th~eAv~lLk~sg~~VtL~V~R~ 330 (684)
+.|+||..|. ++|+++|+|++||+|++|||+++.+++|.+++.+|+.++..|+|+|.|.
T Consensus 110 ~~gi~V~~V~~gspA~~aG~L~~GD~Il~VNG~~v~~~~~~~~~~~l~~~g~~v~L~V~R~ 170 (170)
T 3egg_C 110 KLGIFVKTVTEGGAAHRDGRIQVNDLLVEVDGTSLVGVTQSFAASVLRNTKGRVRFMIGRE 170 (170)
T ss_dssp SBEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTBCHHHHHHHHHHCCSEEEEEEEEC
T ss_pred CCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCEEEEEEEeC
Confidence 4689999997 8999999999999999999999999999999999999999999999883
No 175
>2awx_A Synapse associated protein 97; membrane protein, synaptic signaling, trafficking protein; HET: HIS; 1.80A {Rattus norvegicus} PDB: 2g2l_A 2awu_A 2aww_A 3rl8_A
Probab=98.91 E-value=2.6e-09 Score=94.15 Aligned_cols=63 Identities=33% Similarity=0.492 Sum_probs=56.5
Q ss_pred CCCcEEEecc--hhhhhcCCCCCCCEEEEECCEecCCCCHHHHHHHHHhCCCeEEEEEEeCCccc
Q psy2533 272 DPERFYQNLS--VYRNQNGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGPIVTLEIAKQGAIY 334 (684)
Q Consensus 272 d~GIFV~sI~--GaAardGrLr~GDqIL~VNG~sl~g~Th~eAv~lLk~sg~~VtL~V~R~~~~~ 334 (684)
+.|+||..|. ++|++.|+|++||+|++|||+++.++++.+++.+++..+..|.|.|.|.+...
T Consensus 32 ~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~l~v~R~~~~~ 96 (105)
T 2awx_A 32 DNSIYVTKIIEGGAAHKDGKLQIGDKLLAVNSVSLEEVTHEEAVTALKNTSDFVYLKVAKPTSMY 96 (105)
T ss_dssp BCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCBHHHHHHHHHSCCSEEEEEEECCCC--
T ss_pred CCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEcCCCCC
Confidence 4589999997 89999999999999999999999999999999999999999999999977544
No 176
>2fe5_A Presynaptic protein SAP102; PDZ domain, DLG3, human, structural genomics, structural GEN consortium, SGC, structural protein; HET: GOL; 1.10A {Homo sapiens} SCOP: b.36.1.1 PDB: 2x7z_A 2oqs_A 1qlc_A 2i0l_A
Probab=98.91 E-value=3e-09 Score=91.29 Aligned_cols=60 Identities=33% Similarity=0.511 Sum_probs=54.8
Q ss_pred CCCcEEEecc--hhhhhcCCCCCCCEEEEECCEecCCCCHHHHHHHHHhCCCeEEEEEEeCC
Q psy2533 272 DPERFYQNLS--VYRNQNGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGPIVTLEIAKQG 331 (684)
Q Consensus 272 d~GIFV~sI~--GaAardGrLr~GDqIL~VNG~sl~g~Th~eAv~lLk~sg~~VtL~V~R~~ 331 (684)
..|+||..|. ++|++.|.|++||+|++|||+++.++++.+++.+++..+..|.|.|.|.+
T Consensus 32 ~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~l~v~R~g 93 (94)
T 2fe5_A 32 DNSIYITKIIEGGAAQKDGRLQIGDRLLAVNNTNLQDVRHEEAVASLKNTSDMVYLKVAKPG 93 (94)
T ss_dssp BCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCBHHHHHHHHHTCCSEEEEEEECCC
T ss_pred CCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEcCC
Confidence 4589999997 78998888999999999999999999999999999988889999998864
No 177
>3tsz_A Tight junction protein ZO-1; PDZ3-SH3-GUK, scaffolding, JAM, tight junction, cell adhesio; 2.50A {Homo sapiens} PDB: 3tsw_A 3lh5_A
Probab=98.90 E-value=3.8e-09 Score=114.44 Aligned_cols=84 Identities=29% Similarity=0.497 Sum_probs=72.5
Q ss_pred ceEEEEEecCCCcccEEEEeccCCCCCcccEEEEEecCCChhcccCccccCCeeeecCCeecCCCCHHHHHHHHHc--CC
Q psy2533 91 MKSHSVRDMLRQEAKLSEMSEEGAGQDRLGIYIKSVVKGGAADANGRLQAGDQLLKVDGQSLVGITQEKAAEYLVR--TG 168 (684)
Q Consensus 91 ~~~V~v~k~~~~GLGfsI~GG~~~~~~~~gIfIs~V~pGGpA~r~GrLqvGDrILaVNG~sl~g~sh~eAV~lLk~--sg 168 (684)
.+.|.+.+ +.+|||+|.||.+ .||+|..|.+||||+++| |++||+|++|||.++.++++.+++.+|+. .+
T Consensus 10 ~~~v~~~k--~~~lG~~i~gg~~-----~gi~V~~V~~gspA~~aG-L~~GD~Il~VnG~~v~~~~~~e~~~~l~~~~~g 81 (391)
T 3tsz_A 10 MKLVKFRK--GDSVGLRLAGGND-----VGIFVAGVLEDSPAAKEG-LEEGDQILRVNNVDFTNIIREEAVLFLLDLPKG 81 (391)
T ss_dssp EEEEEEEC--CSSCCEEEEEETT-----TEEEEEEECTTCHHHHTT-CCTTEEEEEETTEECTTCCHHHHHHHHHHSCTT
T ss_pred cEEEEeec--CCceeEEEEecCC-----CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhhcCC
Confidence 44455544 4579999998754 489999999999999999 99999999999999999999999999995 78
Q ss_pred CEEEEEEEecCccc
Q psy2533 169 PIVTLEIAKQGAIY 182 (684)
Q Consensus 169 ~~V~LvV~R~~~~~ 182 (684)
..|.|+|.|....+
T Consensus 82 ~~v~l~v~r~~~~~ 95 (391)
T 3tsz_A 82 EEVTILAQKKKDVY 95 (391)
T ss_dssp SEEEEEEEECHHHH
T ss_pred CeEEEEEeeCCccc
Confidence 89999999986543
No 178
>3soe_A Membrane-associated guanylate kinase, WW and PDZ containing protein 3; structural genomics consortium, SGC, PDZ domain, signaling P; 1.60A {Homo sapiens}
Probab=98.90 E-value=2.3e-09 Score=97.80 Aligned_cols=79 Identities=20% Similarity=0.168 Sum_probs=63.4
Q ss_pred cccccccCCCCCCCCCCCCCCCCCCcccccccccccCCCCCCCCCCCCCCCCCCCCCCcEEEecchhhhhcCCCCCCCEE
Q psy2533 217 SSQNLHDMNNGVGGSHHPAPGPGSGMNHHPVVSRQASTPSLPQASPYPAPAPAPADPERFYQNLSVYRNQNGRLQAGDQL 296 (684)
Q Consensus 217 ~sv~L~k~s~GlGfSi~~~~g~G~Gi~ikpIv~~~~~t~slp~~sl~~gs~~~~~d~GIFV~sI~GaAardGrLr~GDqI 296 (684)
..+.+.+...||||++... ..|.||..|.- ++++++|++||+|
T Consensus 14 ~~V~L~Kg~~G~GFsI~~~------------------------------------~~g~~V~~I~~-~~~~aGL~~GD~I 56 (113)
T 3soe_A 14 VTIPLIKGPKGFGFAIADS------------------------------------PTGQKVKMILD-SQWCQGLQKGDII 56 (113)
T ss_dssp EEEEEECBTTBSSEEEEEE------------------------------------TTEEEEEEESC-GGGSTTCCTTCEE
T ss_pred EEEEEEECCCcccEEEeCC------------------------------------CCCcEEEEecC-hHHhCCCCCCCEE
Confidence 4567888899999998411 01345555553 3567889999999
Q ss_pred EEECCEecCCCCHHHHHHHHHhC--CCeEEEEEEeCCc
Q psy2533 297 LKVDGQSLVGITQEKAAEYLVRT--GPIVTLEIAKQGA 332 (684)
Q Consensus 297 L~VNG~sl~g~Th~eAv~lLk~s--g~~VtL~V~R~~~ 332 (684)
++|||+++.+++|.+++.+|+.+ +..|+|+|.|.+.
T Consensus 57 l~VNG~~v~~~~h~evv~~lk~~~~G~~v~L~V~R~g~ 94 (113)
T 3soe_A 57 KEIYHQNVQNLTHLQVVEVLKQFPVGADVPLLILRGGP 94 (113)
T ss_dssp EEETTEECTTSCHHHHHHHHHHSCTTCEEEEEEEESSC
T ss_pred EEECCEECCCCCHHHHHHHHHcCCCCCEEEEEEEECCc
Confidence 99999999999999999999986 6699999999764
No 179
>3axa_A Afadin, nectin-3, protein AF-6; PDZ domain, fusion protein, cell adhesion; 2.78A {Mus musculus} PDB: 1xz9_A 2exg_A* 1t2m_A 2ain_A
Probab=98.88 E-value=3e-09 Score=93.72 Aligned_cols=65 Identities=51% Similarity=0.731 Sum_probs=58.9
Q ss_pred CCCcEEEecc--hhhhhcCCCCCCCEEEEECCEecCCCCHHHHHHHHHhCCCeEEEEEEeCCccccc
Q psy2533 272 DPERFYQNLS--VYRNQNGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGPIVTLEIAKQGAIYHG 336 (684)
Q Consensus 272 d~GIFV~sI~--GaAardGrLr~GDqIL~VNG~sl~g~Th~eAv~lLk~sg~~VtL~V~R~~~~~~~ 336 (684)
..|+||..|. ++|++.|+|++||+|++|||+++.++++.+++.+++..+..|.|.|.|.+..+..
T Consensus 37 ~~gv~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~~~~~g~~v~l~v~R~~~~~~~ 103 (106)
T 3axa_A 37 KLGIYVKSVVKGGAADVDGRLAAGDQLLSVDGRSLVGLSQERAAELMTRTSSVVTLEVAKQGAIRRE 103 (106)
T ss_dssp SEEEEEEEEBTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTCCSEEEEEEECCCSSCCC
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEeCCccccc
Confidence 4589999997 7999999999999999999999999999999999999999999999998766543
No 180
>2jik_A Synaptojanin-2 binding protein; transmembrane, outer membrane, mitochondria distribution, PDZ, membrane, scaffold, mitochondrion, membrane protein; 1.35A {Homo sapiens} PDB: 2jin_A
Probab=98.87 E-value=5.7e-09 Score=91.01 Aligned_cols=61 Identities=26% Similarity=0.454 Sum_probs=55.3
Q ss_pred CCCcEEEecc--hhhhhcCCCCCCCEEEEECCEecCCCCHHHHHHHHHhCCCeEEEEEEeCCc
Q psy2533 272 DPERFYQNLS--VYRNQNGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGPIVTLEIAKQGA 332 (684)
Q Consensus 272 d~GIFV~sI~--GaAardGrLr~GDqIL~VNG~sl~g~Th~eAv~lLk~sg~~VtL~V~R~~~ 332 (684)
..|+||..|. ++|++.|+|++||+|++|||+.+.++++.+++.+++..+..|.|.|.|.+.
T Consensus 36 ~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~g~~v~l~v~R~~~ 98 (101)
T 2jik_A 36 DSGIYVSRIKENGAAALDGRLQEGDKILSVNGQDLKNLLHQDAVDLFRNAGYAVSLRVQHRLE 98 (101)
T ss_dssp BCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHHTCCSEEEEEEEEESC
T ss_pred CCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEEEEEEeCCC
Confidence 4588999997 788888889999999999999999999999999999888999999988653
No 181
>1d5g_A Human phosphatase HPTP1E; protein-peptide complex, hydrolase; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 3lnx_A 3lny_A 3pdz_A 1vj6_A 1gm1_A 1ozi_A
Probab=98.87 E-value=7.6e-09 Score=89.27 Aligned_cols=60 Identities=32% Similarity=0.474 Sum_probs=54.6
Q ss_pred CCCcEEEecc--hhhhhcCCCCCCCEEEEECCEecCCCCHHHHHHHHHhCCCeEEEEEEeCC
Q psy2533 272 DPERFYQNLS--VYRNQNGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGPIVTLEIAKQG 331 (684)
Q Consensus 272 d~GIFV~sI~--GaAardGrLr~GDqIL~VNG~sl~g~Th~eAv~lLk~sg~~VtL~V~R~~ 331 (684)
..|+||..|. ++|++.|+|++||+|++|||+++.++++.+++.+++..+..|.|.|.|.+
T Consensus 32 ~~g~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~g~~v~l~v~R~~ 93 (96)
T 1d5g_A 32 HGGIYVKAVIPQGAAESDGRIHKGDRVLAVNGVSLEGATHKQAVETLRNTGQVVHLLLEKGQ 93 (96)
T ss_dssp SSCCEEEEECTTSHHHHTTCCCTTCEEEEETTEECTTCCHHHHHHHHHSCCSEEEEEEECCS
T ss_pred cCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEcCC
Confidence 3578999997 78888888999999999999999999999999999998899999998864
No 182
>2d92_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.86 E-value=2.6e-09 Score=94.78 Aligned_cols=61 Identities=23% Similarity=0.257 Sum_probs=55.1
Q ss_pred CCCCcEEEecc--hhhhhcCCCCCCCEEEEECCEecCCCCHHHHHHHHHhC-CCeEEEEEEeCC
Q psy2533 271 ADPERFYQNLS--VYRNQNGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRT-GPIVTLEIAKQG 331 (684)
Q Consensus 271 ~d~GIFV~sI~--GaAardGrLr~GDqIL~VNG~sl~g~Th~eAv~lLk~s-g~~VtL~V~R~~ 331 (684)
.+.|+||..|. ++|++.|+|++||+|++|||+++.++++++++.+|+.. +..|+|+|.|+.
T Consensus 42 ~~~g~~V~~v~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~~v~l~v~R~~ 105 (108)
T 2d92_A 42 TRSVIVIRSLVADGVAERSGGLLPGDRLVSVNEYCLDNTSLAEAVEILKAVPPGLVHLGICSGP 105 (108)
T ss_dssp TCEEEEEEEECTTCHHHHHTCCCTTCEEEEESSCBCTTCCHHHHHHHHHHSCSEEEEEEEECCC
T ss_pred CCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCeEEEEEEcCC
Confidence 34689999997 89999999999999999999999999999999999996 568999999864
No 183
>2yub_A LIMK-2, LIM domain kinase 2; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=98.86 E-value=7.9e-09 Score=94.08 Aligned_cols=88 Identities=16% Similarity=0.243 Sum_probs=68.0
Q ss_pred eEEEEEe---cCCCcccEEEEeccCCCCCcccEEEEEecC--CChhcccCccccCCeeeecCCeecCCCCHHHHHHHHHc
Q psy2533 92 KSHSVRD---MLRQEAKLSEMSEEGAGQDRLGIYIKSVVK--GGAADANGRLQAGDQLLKVDGQSLVGITQEKAAEYLVR 166 (684)
Q Consensus 92 ~~V~v~k---~~~~GLGfsI~GG~~~~~~~~gIfIs~V~p--GGpA~r~GrLqvGDrILaVNG~sl~g~sh~eAV~lLk~ 166 (684)
.+|.+.+ ...+.+||.+...........+++|..|.+ ++||+++| |++||+|++|||..+.+++|.++..+|+.
T Consensus 14 ~~v~l~~~~~~~~g~~G~~v~l~~~~~~~~~gv~V~~V~~~~~spA~~aG-L~~GD~Il~Vng~~v~~~~~~dl~~~l~~ 92 (118)
T 2yub_A 14 YSVTLISMPATTECRRGFSVTVESASSNYATTVQVKEVNRMHISPNNRNA-IHPGDRILEINGTPVRTLRVEEVEDAIKQ 92 (118)
T ss_dssp CEEEEEEECSCSSSSCSSEEEEECTTSSSCCEEEEEECCTTTSCTTHHHH-CCTTCCEEEESSSBTTTSCHHHHHHHHHC
T ss_pred ceeEEeccCCccCCCceEEEEeccccccCCCcEEEEEecCCCCChHHHcC-CCCCCEEEEECCEECCCcCHHHHHHHHHh
Confidence 3445444 233456666653322112235899999999 99999999 99999999999999999999999999998
Q ss_pred CCCEEEEEEEecCc
Q psy2533 167 TGPIVTLEIAKQGA 180 (684)
Q Consensus 167 sg~~V~LvV~R~~~ 180 (684)
.+..|.|+|.|...
T Consensus 93 ~g~~v~l~v~R~g~ 106 (118)
T 2yub_A 93 TSQTLQLLIEHDPV 106 (118)
T ss_dssp CSSCEEEEEEECSS
T ss_pred CCCEEEEEEEECCE
Confidence 77789999998764
No 184
>3o46_A Maguk P55 subfamily member 7; PDZ domain, structural genomics consortium, SGC, protein BIN; 1.30A {Homo sapiens} SCOP: b.36.1.0
Probab=98.85 E-value=5.3e-09 Score=90.02 Aligned_cols=59 Identities=17% Similarity=0.269 Sum_probs=53.8
Q ss_pred CCcEEEecc--hhhhhcCCCCCCCEEEEECCEecCCCCHHHHHHHHHhCCCeEEEEEEeCC
Q psy2533 273 PERFYQNLS--VYRNQNGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGPIVTLEIAKQG 331 (684)
Q Consensus 273 ~GIFV~sI~--GaAardGrLr~GDqIL~VNG~sl~g~Th~eAv~lLk~sg~~VtL~V~R~~ 331 (684)
.++||..|. ++|++.|+|++||+|++|||.++.++++.+++.+|+..+..|+|.|.+..
T Consensus 28 ~~~~V~~v~~gspA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v~l~v~~~~ 88 (93)
T 3o46_A 28 GAIIVARIMRGGAADRSGLIHVGDELREVNGIPVEDKRPEEIIQILAQSQGAITFKIIPGS 88 (93)
T ss_dssp CCEEEEEECTTSHHHHHTCCCTTCEEEEETTEESTTSCHHHHHHHHHHCCEEEEEEEECC-
T ss_pred CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEEEEEEeCC
Confidence 468899887 79999999999999999999999999999999999999889999998753
No 185
>2g5m_B Neurabin-2; spinophilin, PDZ domain, CNS, synaptic transmission, protein binding; NMR {Rattus norvegicus}
Probab=98.85 E-value=6e-09 Score=92.81 Aligned_cols=63 Identities=33% Similarity=0.405 Sum_probs=57.6
Q ss_pred CCCcEEEecc--hhhhhcCCCCCCCEEEEECCEecCCCCHHHHHHHHHhCCCeEEEEEEeCCccc
Q psy2533 272 DPERFYQNLS--VYRNQNGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGPIVTLEIAKQGAIY 334 (684)
Q Consensus 272 d~GIFV~sI~--GaAardGrLr~GDqIL~VNG~sl~g~Th~eAv~lLk~sg~~VtL~V~R~~~~~ 334 (684)
..|+||..|. ++|++.|+|++||+|++|||.++.++++.+++.+++..+..|+|.|.|.+...
T Consensus 34 ~~g~~V~~V~~~s~A~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~g~~v~l~v~R~~~~~ 98 (113)
T 2g5m_B 34 KLGIFVKTVTEGGAAHRDGRIQVNDLLVEVDGTSLVGVTQSFAASVLRNTKGRVRFMIGRERPGE 98 (113)
T ss_dssp CEEEEEEECCTTSHHHHHTCSCTTCBEEEETTEECSSCCHHHHHHHHHHSCSSCEEEEEECCCCT
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHhcCCCeEEEEEEeCCCCC
Confidence 4689999997 89999999999999999999999999999999999999999999999986543
No 186
>1wf8_A Neurabin-I; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.84 E-value=3.1e-09 Score=93.91 Aligned_cols=61 Identities=34% Similarity=0.461 Sum_probs=56.5
Q ss_pred CCCcEEEecc--hhhhhcCCCCCCCEEEEECCEecCCCCHHHHHHHHHhCCCeEEEEEEeCCc
Q psy2533 272 DPERFYQNLS--VYRNQNGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGPIVTLEIAKQGA 332 (684)
Q Consensus 272 d~GIFV~sI~--GaAardGrLr~GDqIL~VNG~sl~g~Th~eAv~lLk~sg~~VtL~V~R~~~ 332 (684)
+.|+||..|. ++|++.|+|++||+|++|||+++.++++.+++.+++..+..|+|.|.|...
T Consensus 39 ~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~l~v~R~~~ 101 (107)
T 1wf8_A 39 KLGIFVKTVTEGGAAQRDGRIQVNDQIVEVDGISLVGVTQNFAATVLRNTKGNVRFVIGREKP 101 (107)
T ss_dssp EEEEEEEEECTTCHHHHHCSSCTTCBEEEETTEECBSCCHHHHHHHHHHCCSEEEEEEEEECC
T ss_pred CCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHhcCCCeEEEEEEeCCC
Confidence 4689999997 899999999999999999999999999999999999999999999998754
No 187
>1ueq_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.84 E-value=2.3e-08 Score=90.75 Aligned_cols=62 Identities=15% Similarity=0.240 Sum_probs=55.3
Q ss_pred CCcEEEecc--hhhhhcCCCCCCCEEEEECCEecCCCCHHHHHHHHHh--CCCeEEEEEEeCCccc
Q psy2533 273 PERFYQNLS--VYRNQNGRLQAGDQLLKVDGQSLVGITQEKAAEYLVR--TGPIVTLEIAKQGAIY 334 (684)
Q Consensus 273 ~GIFV~sI~--GaAardGrLr~GDqIL~VNG~sl~g~Th~eAv~lLk~--sg~~VtL~V~R~~~~~ 334 (684)
.|+||..|. ++|++.|.|++||+|++|||+.+.++++.+++.+|+. .+..|+|.|.|.....
T Consensus 44 ~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~~~~~ 109 (123)
T 1ueq_A 44 EFLQVKSVIPDGPAAQDGKMETGDVIVYINEVCVLGHTHADVVKLFQSVPIGQSVNLVLCRGYPLP 109 (123)
T ss_dssp CCCEEEEECTTSHHHHTSCCCTTCEEEEETTEECTTSCHHHHHHHHHTSCTTCEEEEEEEESCCCC
T ss_pred CCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCeEEEEEEeCCCCC
Confidence 468999987 7899888899999999999999999999999999998 4689999999986443
No 188
>1kwa_A Hcask/LIN-2 protein; PDZ domain, neurexin, syndecan, receptor clustering, kinase; 1.93A {Homo sapiens} SCOP: b.36.1.1
Probab=98.83 E-value=5.3e-09 Score=89.82 Aligned_cols=59 Identities=19% Similarity=0.268 Sum_probs=53.3
Q ss_pred CcEEEecc--hhhhhcCCCCCCCEEEEECCEecCCCCHHHHHHHHHhCCCeEEEEEEeCCc
Q psy2533 274 ERFYQNLS--VYRNQNGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGPIVTLEIAKQGA 332 (684)
Q Consensus 274 GIFV~sI~--GaAardGrLr~GDqIL~VNG~sl~g~Th~eAv~lLk~sg~~VtL~V~R~~~ 332 (684)
++||..|. ++|+++++|++||+|++|||+++.++++++++.+|+..+..|+|.|.|++.
T Consensus 26 ~~~I~~V~~gspA~~~agL~~GD~I~~Ing~~v~~~~~~~~~~~l~~~~~~v~l~v~r~~~ 86 (88)
T 1kwa_A 26 HCIVARIMHGGMIHRQGTLHVGDEIREINGISVANQTVEQLQKMLREMRGSITFKIVPSYR 86 (88)
T ss_dssp GEEEEEECTTSHHHHHTCCCTTCEEEEETTEEGGGSCHHHHHHHHHHCCEEEEEEEECCCC
T ss_pred CEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHhcCCCcEEEEEECCcC
Confidence 57888887 788888899999999999999999999999999999987799999988754
No 189
>1wha_A KIAA0147 protein, scribble; PDZ domain, cellular signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.83 E-value=9.8e-09 Score=90.41 Aligned_cols=61 Identities=21% Similarity=0.454 Sum_probs=56.2
Q ss_pred CCCcEEEecc--hhhhhcCCCCCCCEEEEECCEecCCCCHHHHHHHHHhCCCeEEEEEEeCCc
Q psy2533 272 DPERFYQNLS--VYRNQNGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGPIVTLEIAKQGA 332 (684)
Q Consensus 272 d~GIFV~sI~--GaAardGrLr~GDqIL~VNG~sl~g~Th~eAv~lLk~sg~~VtL~V~R~~~ 332 (684)
+.|+||..|. ++|++.|.|++||+|++|||+++.++++.+++.+|+..+..|.|.|.|...
T Consensus 37 ~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~l~~~g~~v~l~v~R~~~ 99 (105)
T 1wha_A 37 DAGIFVSRIAEGGAAHRAGTLQVGDRVLSINGVDVTEARHDHAVSLLTAASPTIALLLEREAG 99 (105)
T ss_dssp CCSCEEEECCTTSSHHHHSSCCTTCEEEEESSCBCTTCCHHHHHHHHTSCCSCEEEEEEECCC
T ss_pred CCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEECCC
Confidence 4689999997 799999889999999999999999999999999999888999999999753
No 190
>1wi4_A Synip, syntaxin binding protein 4; syntaxin4-interacting protein, STXBP4 protein, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.83 E-value=7.7e-09 Score=92.41 Aligned_cols=60 Identities=23% Similarity=0.468 Sum_probs=54.1
Q ss_pred CCcEEEecc--hhhhhcCCCCCCCEEEEECCEecCCCCHHHHHHHHHhCC----CeEEEEEEeCCc
Q psy2533 273 PERFYQNLS--VYRNQNGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTG----PIVTLEIAKQGA 332 (684)
Q Consensus 273 ~GIFV~sI~--GaAardGrLr~GDqIL~VNG~sl~g~Th~eAv~lLk~sg----~~VtL~V~R~~~ 332 (684)
.++||..|. ++|+++|+|++||+|++|||+++.+++|++++.+|+.+. ..++|.|.|.+.
T Consensus 41 ~~~~V~~v~~~s~A~~aG~l~~GD~Il~Vng~~~~~~~~~~~~~~l~~~~~r~~~~~~l~v~R~~~ 106 (109)
T 1wi4_A 41 PLVYIHEVIPGGDCYKDGRLKPGDQLVSINKESMIGVSFEEAKSIITRAKLRSESPWEIAFIRSGP 106 (109)
T ss_dssp SSEEEEEECTTSHHHHHCSCCTTCBEEEETTSCCTTCCHHHHHHHHHHSCCSSSSCEEEEEECCCC
T ss_pred CCEEEEEeCCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHccccCCCceEEEEEEeCCC
Confidence 478999997 899999999999999999999999999999999999876 579999988653
No 191
>2fne_A Multiple PDZ domain protein; structural protein, structural genomics, SGC, structural genomics consortium, unknown function; 1.83A {Homo sapiens} SCOP: b.36.1.1
Probab=98.82 E-value=4e-09 Score=95.52 Aligned_cols=60 Identities=35% Similarity=0.498 Sum_probs=55.5
Q ss_pred CCcEEEecc--hhhhhcCCCCCCCEEEEECCEecCCCCHHHHHHHHHhCCCeEEEEEEeCCc
Q psy2533 273 PERFYQNLS--VYRNQNGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGPIVTLEIAKQGA 332 (684)
Q Consensus 273 ~GIFV~sI~--GaAardGrLr~GDqIL~VNG~sl~g~Th~eAv~lLk~sg~~VtL~V~R~~~ 332 (684)
.|+||..|. |+|++.|+|++||+|++|||+++.++++.+++.+|+..+..|+|.|.|.+.
T Consensus 53 ~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~v~l~v~R~g~ 114 (117)
T 2fne_A 53 LPIYVKTVFAKGAASEDGRLKRGDQIIAVNGQSLEGVTHEEAVAILKRTKGTVTLMVLSSDE 114 (117)
T ss_dssp EEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHCCSSEEEEEEECSC
T ss_pred CCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEeCCc
Confidence 478999997 899999999999999999999999999999999999988899999999764
No 192
>1wh1_A KIAA1095 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.82 E-value=1.3e-08 Score=92.54 Aligned_cols=78 Identities=23% Similarity=0.422 Sum_probs=65.5
Q ss_pred CCcccEEEEeccCCCCCcccEEEEEecCCChhcccCccccCCeeeecCCeecCCCCHHHHHHHHHcC-CCEEEEEEEecC
Q psy2533 101 RQEAKLSEMSEEGAGQDRLGIYIKSVVKGGAADANGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRT-GPIVTLEIAKQG 179 (684)
Q Consensus 101 ~~GLGfsI~GG~~~~~~~~gIfIs~V~pGGpA~r~GrLqvGDrILaVNG~sl~g~sh~eAV~lLk~s-g~~V~LvV~R~~ 179 (684)
..+|||.+....... ...+++|..|.+++||+++|+|++||+|++|||.++.+ +.++..+|+.. +..|.|+|.|..
T Consensus 31 ~~~lG~~~~~~~~~~-~~~gv~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~--~~~~~~~l~~~~g~~v~l~v~R~g 107 (124)
T 1wh1_A 31 QDKLGLTVCYRTDDE-DDIGIYISEIDPNSIAAKDGRIREGDRIIQINGIEVQN--REEAVALLTSEENKNFSLLIARPE 107 (124)
T ss_dssp TCCCCEEEECCCCCS-SCCCEEEEEECSSSHHHHTCCCCTTCEEEEESSCBCCS--HHHHHHHHTCSSCCSCCEEEEECS
T ss_pred CCcccEEEEecCCCC-CCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCC--HHHHHHHHHhCCCCEEEEEEEECC
Confidence 458999998754321 13589999999999999999999999999999999974 88999999875 678999999986
Q ss_pred cc
Q psy2533 180 AI 181 (684)
Q Consensus 180 ~~ 181 (684)
..
T Consensus 108 ~~ 109 (124)
T 1wh1_A 108 LQ 109 (124)
T ss_dssp SC
T ss_pred EE
Confidence 43
No 193
>2dm8_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.82 E-value=2.4e-08 Score=89.13 Aligned_cols=64 Identities=30% Similarity=0.370 Sum_probs=56.5
Q ss_pred CCcEEEecc--hhhhhcCCCCCCCEEEEECCEecCCCCHHHHHHHHHhCCCeEEEEEEeCCccccc
Q psy2533 273 PERFYQNLS--VYRNQNGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGPIVTLEIAKQGAIYHG 336 (684)
Q Consensus 273 ~GIFV~sI~--GaAardGrLr~GDqIL~VNG~sl~g~Th~eAv~lLk~sg~~VtL~V~R~~~~~~~ 336 (684)
.|+||..|. ++|++.|+|++||+|++|||+.+.++++.+++.+|+..+..|+|.|.|.+..+..
T Consensus 43 ~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~~v~l~v~R~~~~~~~ 108 (116)
T 2dm8_A 43 NAIVIHEVYEEGAAARDGRLWAGDQILEVNGVDLRNSSHEEAITALRQTPQKVRLVVYRDEAHYRD 108 (116)
T ss_dssp SSEECCCCCSSSHHHHHTCCCTTCEEEEETTEECSSSCHHHHHHHHHTCCSEEEEEEECCSSCCCS
T ss_pred CCEEEEEECCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEEEEEEeCCccccc
Confidence 367888886 7889988899999999999999999999999999998889999999997765543
No 194
>1uep_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.82 E-value=8.5e-09 Score=90.63 Aligned_cols=60 Identities=22% Similarity=0.351 Sum_probs=54.2
Q ss_pred CCcEEEecc--hhhhhcCCCCCCCEEEEECCEecCCCCHHHHHHHHHhC--CCeEEEEEEeCCc
Q psy2533 273 PERFYQNLS--VYRNQNGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRT--GPIVTLEIAKQGA 332 (684)
Q Consensus 273 ~GIFV~sI~--GaAardGrLr~GDqIL~VNG~sl~g~Th~eAv~lLk~s--g~~VtL~V~R~~~ 332 (684)
.++||..|. ++|++.|+|++||+|++|||+++.++++.+++.+|+.. +..|+|.|.|...
T Consensus 34 ~~~~V~~V~~~spA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~~~ 97 (103)
T 1uep_A 34 QPILIGAVIAMGSADRDGRLHPGDELVYVDGIPVAGKTHRYVIDLMHHAARNGQVNLTVRRKVL 97 (103)
T ss_dssp SCCBEEEECTTSTTGGGTCCCTTCEEEEETTEECTTSCHHHHHHHHHHHHHHTEEEEEEEEECC
T ss_pred CCeEEEEeCCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCcEEEEEEeCCC
Confidence 467888886 78999999999999999999999999999999999987 7899999998753
No 195
>3qik_A Phosphatidylinositol 3,4,5-trisphosphate-dependen exchanger 1 protein; PDZ domain, structural genomics consortium, SGC, hydrolase R; 2.29A {Homo sapiens}
Probab=98.82 E-value=1.8e-08 Score=90.33 Aligned_cols=76 Identities=16% Similarity=0.214 Sum_probs=65.7
Q ss_pred EEecCCCcccEEEEeccCCCCCcccEEEEEecCCChhcccCccccCCeeeecCCeecCCCCHHHHHHHHHc---CCCEEE
Q psy2533 96 VRDMLRQEAKLSEMSEEGAGQDRLGIYIKSVVKGGAADANGRLQAGDQLLKVDGQSLVGITQEKAAEYLVR---TGPIVT 172 (684)
Q Consensus 96 v~k~~~~GLGfsI~GG~~~~~~~~gIfIs~V~pGGpA~r~GrLqvGDrILaVNG~sl~g~sh~eAV~lLk~---sg~~V~ 172 (684)
+......++||.+.... .+.+|..|.+|+||+++| |++||+|++|||.++...++++++.+++. .+..|.
T Consensus 22 ~l~~~~~g~G~~l~~~~------~~~~I~~V~~gSpA~~AG-L~~GD~I~~Ing~~v~~~s~~dv~~~i~~~~~~g~~v~ 94 (101)
T 3qik_A 22 LILPQEEDYGFDIEEKN------KAVVVKSVQRGSLAEVAG-LQVGRKIYSINEDLVFLRPFSEVESILNQSFCSRRPLR 94 (101)
T ss_dssp EECCCSSSSSEEEEEET------TEEEEEEECTTSHHHHHT-CCTTCBEEEETTEESTTSCHHHHHHHHHHHHHTTCCEE
T ss_pred EEEeCCCcccEEEEccC------CCeEEEEECCCCHHHHcC-CCCCCEEEEECCEEcCcCCHHHHHHHHHHhhccCCeEE
Confidence 34456789999998532 368999999999999999 99999999999999988999999999987 588999
Q ss_pred EEEEec
Q psy2533 173 LEIAKQ 178 (684)
Q Consensus 173 LvV~R~ 178 (684)
|.|+..
T Consensus 95 LLV~~~ 100 (101)
T 3qik_A 95 LLVATK 100 (101)
T ss_dssp EEEECC
T ss_pred EEEecC
Confidence 998754
No 196
>2krg_A Na(+)/H(+) exchange regulatory cofactor NHE-RF1; acetylation, cell projection, disease mutation, membrane, phosphoprotein, polymorphism; NMR {Homo sapiens}
Probab=98.81 E-value=4.3e-09 Score=105.61 Aligned_cols=85 Identities=19% Similarity=0.303 Sum_probs=72.2
Q ss_pred CceEEEEEecCCCcccEEEEeccCCCCCcccEEEEEecCCChhcccCccccCCeeeecCCeecCCCCHHHHHHHHHcCCC
Q psy2533 90 SMKSHSVRDMLRQEAKLSEMSEEGAGQDRLGIYIKSVVKGGAADANGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGP 169 (684)
Q Consensus 90 ~~~~V~v~k~~~~GLGfsI~GG~~~~~~~~gIfIs~V~pGGpA~r~GrLqvGDrILaVNG~sl~g~sh~eAV~lLk~sg~ 169 (684)
..+.|.+.+ ...||||.|.++.+ ..|++|..|.+||||+++| |++||+|++|||..+.++++.+++.+|+..+.
T Consensus 9 ~~r~v~l~k-~~~glG~~l~~~~~----~~gv~V~~V~~gSpA~~aG-L~~GD~Il~VNG~~V~~~s~~dl~~~l~~~g~ 82 (216)
T 2krg_A 9 RPRLCTMKK-GPSGYGFNLHSDKS----KPGQFIRSVDPDSPAEASG-LRAQDRIVEVNGVCMEGKQHGDVVSAIRAGGD 82 (216)
T ss_dssp CCEEEEEEC-CSSSSCEEECCCSS----SCSCBEEEECTTSHHHHHT-CCTTCBCCEETTEECTTCCTHHHHHHHHHHCS
T ss_pred ceEEEEEEe-CCCCceEEEEecCC----CCCeEEEEeCCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhcCC
Confidence 456666655 55789999987653 2379999999999999999 99999999999999999999999999988788
Q ss_pred EE-EEEEEecCc
Q psy2533 170 IV-TLEIAKQGA 180 (684)
Q Consensus 170 ~V-~LvV~R~~~ 180 (684)
.| .|+|.|...
T Consensus 83 ~v~~l~V~R~g~ 94 (216)
T 2krg_A 83 ETKLLVVDRETD 94 (216)
T ss_dssp EEEEEECCHHHH
T ss_pred eEEEEEEEECCE
Confidence 88 888877654
No 197
>1g9o_A NHE-RF; PDZ domain, complex, signaling protein; 1.50A {Homo sapiens} SCOP: b.36.1.1 PDB: 1i92_A 1gq4_A 1gq5_A 2ocs_A
Probab=98.81 E-value=1.2e-08 Score=87.19 Aligned_cols=58 Identities=19% Similarity=0.290 Sum_probs=51.4
Q ss_pred CCcEEEecc--hhhhhcCCCCCCCEEEEECCEecCCCCHHHHHHHHHhCCCeEEEEEEeCC
Q psy2533 273 PERFYQNLS--VYRNQNGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGPIVTLEIAKQG 331 (684)
Q Consensus 273 ~GIFV~sI~--GaAardGrLr~GDqIL~VNG~sl~g~Th~eAv~lLk~sg~~VtL~V~R~~ 331 (684)
.|+||..|. ++|++.| |++||+|++|||+++.++++.+++.+|+..+..+.+.+.++.
T Consensus 27 ~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~~~~~~~~r~ 86 (91)
T 1g9o_A 27 LGQYIRLVEPGSPAEKAG-LLAGDRLVEVNGENVEKETHQQVVSRIRAALNAVRLLVVDPE 86 (91)
T ss_dssp SSEEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHHHTCSSEEEEEEECCC
T ss_pred CCEEEEEECCCCHHHHCC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCcEEEEEEcCC
Confidence 478888887 7888877 999999999999999999999999999998888888777764
No 198
>2dkr_A LIN-7 homolog B; LIN-7B, PDZ, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.81 E-value=1.1e-08 Score=87.51 Aligned_cols=59 Identities=31% Similarity=0.392 Sum_probs=53.7
Q ss_pred CCcEEEecc--hhhhhcCCCCCCCEEEEECCEecCCCCHHHHHHHHHhCCCeEEEEEEeCC
Q psy2533 273 PERFYQNLS--VYRNQNGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGPIVTLEIAKQG 331 (684)
Q Consensus 273 ~GIFV~sI~--GaAardGrLr~GDqIL~VNG~sl~g~Th~eAv~lLk~sg~~VtL~V~R~~ 331 (684)
.++||..|. ++|++.|+|++||+|++|||+.+.++++.+++.+++..+..|.|.|.|..
T Consensus 30 ~~~~V~~V~~~spA~~aGgl~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~l~v~r~~ 90 (93)
T 2dkr_A 30 SPIYISRVIPGGVADRHGGLKRGDQLLSVNGVSVEGEQHEKAVELLKAAQGSVKLVVRSGP 90 (93)
T ss_dssp CCCEEEEECTTSHHHHHCCCCTTCBEEEETTEECTTSCHHHHHHHHHHCCSEEEEEECCCC
T ss_pred CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCcEEEEEEeCC
Confidence 478898887 78898888999999999999999999999999999998889999998764
No 199
>2he4_A Na(+)/H(+) exchange regulatory cofactor NHE-RF2; phosphorylation, structural genomics, structural genomics consortium, SGC, unknown function; 1.45A {Homo sapiens} PDB: 2ozf_A
Probab=98.80 E-value=1.1e-08 Score=87.41 Aligned_cols=59 Identities=19% Similarity=0.387 Sum_probs=53.6
Q ss_pred CCcEEEecc--hhhhhcCCCCCCCEEEEECCEecCCCCHHHHHHHHHhCCCeEEEEEEeCCc
Q psy2533 273 PERFYQNLS--VYRNQNGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGPIVTLEIAKQGA 332 (684)
Q Consensus 273 ~GIFV~sI~--GaAardGrLr~GDqIL~VNG~sl~g~Th~eAv~lLk~sg~~VtL~V~R~~~ 332 (684)
.|++|..|. ++|++.| |++||+|++|||.++.+++|.++..+|+..+..|.|.|.|++.
T Consensus 28 ~gv~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v~l~v~r~~~ 88 (90)
T 2he4_A 28 PGQYIRSVDPGSPAARSG-LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGPST 88 (90)
T ss_dssp SSEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTSCHHHHHHHHTTSSSEEEEEEECCCC
T ss_pred CCEEEEEECCCChHHHCC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCcEEEEEEccCC
Confidence 478888887 7888887 9999999999999999999999999999988999999998764
No 200
>1um1_A KIAA1849 protein, RSGI RUH-007; PDZ domain, human cDNA, structural genomics, riken structural genomics/proteomics initiative, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.80 E-value=1.3e-08 Score=90.20 Aligned_cols=63 Identities=29% Similarity=0.463 Sum_probs=57.3
Q ss_pred CCCcEEEecc--hhhhhcCCCCCCCEEEEECCEecCCCCHHHHHHHHHhCCCeEEEEEEeCCccc
Q psy2533 272 DPERFYQNLS--VYRNQNGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGPIVTLEIAKQGAIY 334 (684)
Q Consensus 272 d~GIFV~sI~--GaAardGrLr~GDqIL~VNG~sl~g~Th~eAv~lLk~sg~~VtL~V~R~~~~~ 334 (684)
..|+||..|. ++|++.|+|++||+|++|||+.+.++++.+++.+++..+..|.|.|.|.+...
T Consensus 35 ~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~l~v~R~~~~~ 99 (110)
T 1um1_A 35 APGLYIQTLLPGSPAAADGRLSLGDRILEVNGSSLLGLGYLRAVDLIRHGGKKMRFLVAKSDVET 99 (110)
T ss_dssp CSSEEEEEECTTSHHHHHSCCCTTCEEEEESSCBCSSCCHHHHHHHHHTCCSEEEEEEECCCHHH
T ss_pred CCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEeCCcce
Confidence 4689999997 79999999999999999999999999999999999999999999999986543
No 201
>2ehr_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.80 E-value=2.1e-08 Score=89.97 Aligned_cols=63 Identities=19% Similarity=0.290 Sum_probs=57.1
Q ss_pred CCCCcEEEecc--hhhhhcCCCCCCCEEEEECCEecCCCCHHHHHHHHHhCCCeEEEEEEeCCcc
Q psy2533 271 ADPERFYQNLS--VYRNQNGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGPIVTLEIAKQGAI 333 (684)
Q Consensus 271 ~d~GIFV~sI~--GaAardGrLr~GDqIL~VNG~sl~g~Th~eAv~lLk~sg~~VtL~V~R~~~~ 333 (684)
...|+||..|. ++|++.|+|++||+|++|||+++.++++.+++.+|+..+..|+|.|.|....
T Consensus 48 ~~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~~~~~g~~v~l~v~r~~~~ 112 (117)
T 2ehr_A 48 ELKGIFIKQVLEDSPAGKTNALKTGDKILEVSGVDLQNASHSEAVEAIKNAGNPVVFIVQSLSST 112 (117)
T ss_dssp CCCSEEEEEECSSSTTTSSCSCCTTCEEEEESSCBCTTCCHHHHHHHHHTSCSSEEEEECCBSCC
T ss_pred CcCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEECCCC
Confidence 35689999997 7899988899999999999999999999999999999999999999887553
No 202
>2dlu_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.80 E-value=1.2e-08 Score=90.54 Aligned_cols=61 Identities=30% Similarity=0.486 Sum_probs=55.3
Q ss_pred CCcEEEecc--hhhhhcCCCCCCCEEEEECCEecCCCCHHHHHHHHHhCCCeEEEEEEeCCcc
Q psy2533 273 PERFYQNLS--VYRNQNGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGPIVTLEIAKQGAI 333 (684)
Q Consensus 273 ~GIFV~sI~--GaAardGrLr~GDqIL~VNG~sl~g~Th~eAv~lLk~sg~~VtL~V~R~~~~ 333 (684)
.|+||..|. ++|++.|+|++||+|++|||+.+.++++.+++.+|+..+..|.|.|.|.+..
T Consensus 38 ~g~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~g~~v~l~v~R~~~~ 100 (111)
T 2dlu_A 38 SGVVVRTIVPGGLADRDGRLQTGDHILKIGGTNVQGMTSEQVAQVLRNCGNSVRMLVARDPAG 100 (111)
T ss_dssp SSBEEEEECTTSSHHHHTCCCSSCEEEEESSCCCTTSCHHHHHHHHHHHCSEEEEEEEESCTT
T ss_pred CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEEEEEEeCCCC
Confidence 478898887 7899988899999999999999999999999999998889999999987654
No 203
>3i4w_A Disks large homolog 4; alpha and beta protein, alternative splicing, cell junction, cell membrane, lipoprotein, membrane, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.36.1.1 PDB: 3k82_A* 3jxt_A* 2he2_A 1pdr_A 2i0i_A
Probab=98.79 E-value=7.3e-09 Score=90.48 Aligned_cols=63 Identities=29% Similarity=0.346 Sum_probs=56.6
Q ss_pred CCcEEEecc--hhhhhcCCCCCCCEEEEECCEecCCCCHHHHHHHHHhCCCeEEEEEEeCCcccc
Q psy2533 273 PERFYQNLS--VYRNQNGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGPIVTLEIAKQGAIYH 335 (684)
Q Consensus 273 ~GIFV~sI~--GaAardGrLr~GDqIL~VNG~sl~g~Th~eAv~lLk~sg~~VtL~V~R~~~~~~ 335 (684)
.|+||..|. ++|++.|.|++||+|++|||.++.++++.+++.+++..+..|+|.|.|....+.
T Consensus 35 ~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~l~v~r~~~~~~ 99 (104)
T 3i4w_A 35 EGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVTIIAQYKPEEYS 99 (104)
T ss_dssp CCEEEEEECTTSHHHHHCCCCTTEEEEEETTEECTTCCHHHHHHHHHTSCSEEEEEEEECHHHHH
T ss_pred CCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEECcchhh
Confidence 478999987 789998889999999999999999999999999999999999999999765443
No 204
>3e17_A Tight junction protein ZO-2; domain swapping, alternative promoter usage, alternative splicing, cell junction, cell membrane, disease mutation; 1.75A {Homo sapiens}
Probab=98.79 E-value=8.9e-09 Score=88.39 Aligned_cols=60 Identities=17% Similarity=0.339 Sum_probs=53.7
Q ss_pred CcEEEecc--hhhhhcCCCCCCCEEEEECCEecCCCCHHHHHHHHHhCCCeEEEEEEeCCcc
Q psy2533 274 ERFYQNLS--VYRNQNGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGPIVTLEIAKQGAI 333 (684)
Q Consensus 274 GIFV~sI~--GaAardGrLr~GDqIL~VNG~sl~g~Th~eAv~lLk~sg~~VtL~V~R~~~~ 333 (684)
|+||..|. |+|++.|+|++||+|++|||+++.++++++++.+|+.++..|+|.|.+....
T Consensus 22 gv~V~~V~~gspA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~i~~~~~~v~L~v~~~~~~ 83 (88)
T 3e17_A 22 QIFVKEMTRTGLATKDGNLHEGDIILKINGTVTENMSLTDARKLIEKSRGKLQLVVLRDLEH 83 (88)
T ss_dssp EEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHTTTEEEEEECCC---
T ss_pred CEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEeCCCcc
Confidence 68898887 7999999999999999999999999999999999999999999999876543
No 205
>1q7x_A PDZ2B domain of PTP-BAS (HPTP1E); phosphatase, structural proteomics in europe, spine, structural genomics, hydrolase; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.78 E-value=1.2e-08 Score=90.16 Aligned_cols=61 Identities=31% Similarity=0.472 Sum_probs=56.3
Q ss_pred CCCcEEEecc--hhhhhcCCCCCCCEEEEECCEecCCCCHHHHHHHHHhCCCeEEEEEEeCCc
Q psy2533 272 DPERFYQNLS--VYRNQNGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGPIVTLEIAKQGA 332 (684)
Q Consensus 272 d~GIFV~sI~--GaAardGrLr~GDqIL~VNG~sl~g~Th~eAv~lLk~sg~~VtL~V~R~~~ 332 (684)
..|+||..|. ++|++.|+|++||+|++|||+++.++++.+++.+++..+..|+|.|.|.+.
T Consensus 41 ~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~g~~v~l~v~R~~~ 103 (108)
T 1q7x_A 41 HGGIYVKAVIPQGAAESDGRIHKGDRVLAVNGVSLEGATHKQAVETLRNTGQVVHLLLEKGQS 103 (108)
T ss_dssp SCCCBEEEECTTSTHHHHTCCCSSCEEEEETTEECBSCTTSHHHHHHHHTTSEEEEEEECCCC
T ss_pred CCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEeCCc
Confidence 4689999997 899999999999999999999999999999999999999999999998754
No 206
>2daz_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.78 E-value=1.3e-08 Score=92.55 Aligned_cols=63 Identities=21% Similarity=0.334 Sum_probs=57.5
Q ss_pred CCcEEEecc--hhhhhcCCCCCCCEEEEECCEecCCCCHHHHHHHHHhCCCeEEEEEEeCCcccc
Q psy2533 273 PERFYQNLS--VYRNQNGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGPIVTLEIAKQGAIYH 335 (684)
Q Consensus 273 ~GIFV~sI~--GaAardGrLr~GDqIL~VNG~sl~g~Th~eAv~lLk~sg~~VtL~V~R~~~~~~ 335 (684)
.|+||..|. ++|++.|+|++||+|++|||+++.++++.+++.+++..+..|.|.|.|.+....
T Consensus 51 ~gv~V~~V~~~spA~~aG~L~~GD~Il~Ing~~v~~~~~~~~~~~~~~~~~~v~l~v~R~~~~~~ 115 (124)
T 2daz_A 51 MSIFVVGINPEGPAAADGRMRIGDELLEINNQILYGRSHQNASAIIKTAPSKVKLVFIRNEDAVN 115 (124)
T ss_dssp CCEEEEEECTTSHHHHHTCCCTTCEECEESSCBCTTSCHHHHHHHHHHSCSEEEEEEEECTTHHH
T ss_pred CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEeCCCccc
Confidence 578999997 799999999999999999999999999999999999999999999999876543
No 207
>2opg_A Multiple PDZ domain protein; structural protein, structural genomics, structural genomics consortium, SGC; 1.50A {Homo sapiens}
Probab=98.78 E-value=1.5e-08 Score=87.65 Aligned_cols=62 Identities=31% Similarity=0.382 Sum_probs=55.9
Q ss_pred CCcEEEecc--hhhhhcCCCCCCCEEEEECCEecCCCCHHHHHHHHHhCCCeEEEEEEeCCccc
Q psy2533 273 PERFYQNLS--VYRNQNGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGPIVTLEIAKQGAIY 334 (684)
Q Consensus 273 ~GIFV~sI~--GaAardGrLr~GDqIL~VNG~sl~g~Th~eAv~lLk~sg~~VtL~V~R~~~~~ 334 (684)
.|+||..|. ++|++.|.|++||+|++|||.++.++++.+++.+++..+..|.|.|.|.+..+
T Consensus 30 ~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~l~v~R~~~~~ 93 (98)
T 2opg_A 30 GAIIIHEVYEEGAACKDGRLWAGDQILEVNGIDLRKATHDEAINVLRQTPQRVRLTLYRDEAPY 93 (98)
T ss_dssp CSEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTCCSEEEEEEEECSSCC
T ss_pred CCEEEEEECCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEEEEEEcCCCCC
Confidence 478999987 78998888999999999999999999999999999988899999999976543
No 208
>2eno_A Synaptojanin-2-binding protein; mitochondrial outer membrane protein 25, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.77 E-value=2.5e-08 Score=89.92 Aligned_cols=62 Identities=26% Similarity=0.462 Sum_probs=56.6
Q ss_pred CCCcEEEecc--hhhhhcCCCCCCCEEEEECCEecCCCCHHHHHHHHHhCCCeEEEEEEeCCcc
Q psy2533 272 DPERFYQNLS--VYRNQNGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGPIVTLEIAKQGAI 333 (684)
Q Consensus 272 d~GIFV~sI~--GaAardGrLr~GDqIL~VNG~sl~g~Th~eAv~lLk~sg~~VtL~V~R~~~~ 333 (684)
..++||..|. ++|++.|+|++||+|++|||+++.++++.+++.+++..+..|.|.|.|....
T Consensus 46 ~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~~~~~g~~v~l~v~R~~~~ 109 (120)
T 2eno_A 46 DSGIYVSRIKENGAAALDGRLQEGDKILSVNGQDLKNLLHQDAVDLFRNAGYAVSLRVQHRLQV 109 (120)
T ss_dssp CCSEEEEEECSSSHHHHSCCSCTTCEEEEETTEECCSCCHHHHHHHHHHHCSEEEEEEEEEEEC
T ss_pred CCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEeCCcC
Confidence 4689999997 7899988899999999999999999999999999998899999999997653
No 209
>1n7e_A AMPA receptor interacting protein GRIP; PDZ, protein binding; 1.50A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1n7f_A
Probab=98.77 E-value=2e-08 Score=87.09 Aligned_cols=60 Identities=28% Similarity=0.410 Sum_probs=54.2
Q ss_pred CCcEEEecc--hhhhhcCCCCCCCEEEEECCEecCCCCHHHHHHHHHhCCCeEEEEEEeCCc
Q psy2533 273 PERFYQNLS--VYRNQNGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGPIVTLEIAKQGA 332 (684)
Q Consensus 273 ~GIFV~sI~--GaAardGrLr~GDqIL~VNG~sl~g~Th~eAv~lLk~sg~~VtL~V~R~~~ 332 (684)
.++||..|. ++|++.|.|++||+|++|||+.+.++++.+++.+|+..+..|.|.|.|.+.
T Consensus 30 ~~~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~g~~v~l~v~R~~~ 91 (97)
T 1n7e_A 30 DPIIISSLTKGGLAERTGAIHIGDRILAINSSSLKGKPLSEAIHLLQMAGETVTLKIKKQTD 91 (97)
T ss_dssp SCCEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCCHHHHHHHHHTCCSEEEEEEECCCC
T ss_pred CCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEeCCC
Confidence 468888887 788888889999999999999999999999999999888899999998764
No 210
>1ufx_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.77 E-value=9.3e-09 Score=91.09 Aligned_cols=58 Identities=17% Similarity=0.275 Sum_probs=52.2
Q ss_pred CcEEEecc--hhhhhcCCCCCCCEEEEECCEecCCCCHHHHHHHHHh-----CCCeEEEEEEeCC
Q psy2533 274 ERFYQNLS--VYRNQNGRLQAGDQLLKVDGQSLVGITQEKAAEYLVR-----TGPIVTLEIAKQG 331 (684)
Q Consensus 274 GIFV~sI~--GaAardGrLr~GDqIL~VNG~sl~g~Th~eAv~lLk~-----sg~~VtL~V~R~~ 331 (684)
++||..|. ++|+++|+|++||+|++|||+++.+++|++|+.+|+. .++.+.|.|.|..
T Consensus 33 ~~~I~~v~~~s~A~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~~~~~~i~l~v~r~~ 97 (103)
T 1ufx_A 33 LPRIVTIQRGGSAHNCGQLKVGHVILEVNGLTLRGKEHREAARIIAEAFKTKDRDYIDFLVTEFN 97 (103)
T ss_dssp SCEEEEECTTSHHHHHCSSCTTCBCCEETTEECTTCBHHHHHHHHHHHHHCSSCSEEEEEECCCC
T ss_pred cEEEEEeCCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHHhcccCCCCeEEEEEEEcc
Confidence 45888886 8999999999999999999999999999999999998 4678999998864
No 211
>3b76_A E3 ubiquitin-protein ligase LNX; PDZ, bound ligand, structural genomics, structural genomics consortium, SGC, metal-binding; 1.75A {Homo sapiens}
Probab=98.77 E-value=1.3e-08 Score=92.54 Aligned_cols=60 Identities=27% Similarity=0.427 Sum_probs=55.9
Q ss_pred CCCcEEEecc--hhhhhcCCCCCCCEEEEECCEecCCCCHHHHHHHHHhCCCeEEEEEEeCC
Q psy2533 272 DPERFYQNLS--VYRNQNGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGPIVTLEIAKQG 331 (684)
Q Consensus 272 d~GIFV~sI~--GaAardGrLr~GDqIL~VNG~sl~g~Th~eAv~lLk~sg~~VtL~V~R~~ 331 (684)
..|+||..|. |+|++.|+|++||+|++|||+++.++++.+++.+|+.++..|+|.|.|..
T Consensus 52 ~~gv~V~~V~~gspA~~aG~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~~v~L~v~R~~ 113 (118)
T 3b76_A 52 DLPIYVISVEPGGVISRDGRIKTGDILLNVDGVELTEVSRSEAVALLKRTSSSIVLKALEVK 113 (118)
T ss_dssp CCCEEEEEECTTSHHHHHCSSCTTCEEEEETTEEGGGSCHHHHHHHHHSCCSEEEEEEEEEE
T ss_pred CCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEECC
Confidence 4689999997 89999999999999999999999999999999999999999999999853
No 212
>1p1d_A PDZ45, glutamate receptor interacting protein; PDZ domain, tandem repeats, scaffold protein, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1 b.36.1.1 PDB: 1p1e_A 1x5r_A
Probab=98.77 E-value=1.7e-08 Score=98.00 Aligned_cols=87 Identities=24% Similarity=0.280 Sum_probs=72.5
Q ss_pred eEEEEEecCCCcccEEEEeccCCCCCcccEEEEEecCCChhcccCccccCCeeeecCCeecCCCCHHHHHHHHHcCCCEE
Q psy2533 92 KSHSVRDMLRQEAKLSEMSEEGAGQDRLGIYIKSVVKGGAADANGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGPIV 171 (684)
Q Consensus 92 ~~V~v~k~~~~GLGfsI~GG~~~~~~~~gIfIs~V~pGGpA~r~GrLqvGDrILaVNG~sl~g~sh~eAV~lLk~sg~~V 171 (684)
..+.+.+....+|||.+.+..... ...+++|..|.++|||+++|+|++||+|++|||.++.++++.+++.+|+..+..+
T Consensus 109 ~~v~l~~~~~~~lG~~~~~~~~~~-~~~gv~V~~V~~~s~A~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~~v 187 (196)
T 1p1d_A 109 FHVKLPKKHSVELGITISSPSSRK-PGDPLVISDIKKGSVAHRTGTLELGDKLLAIDNIRLDSCSMEDAVQILQQCEDLV 187 (196)
T ss_dssp EEEEECCCSSCCCCCEEECSCSSS-TTCCCEEEECCSSSHHHHTSCCCTTCEEEEETTEEGGGCCHHHHHHHHHHCTTCE
T ss_pred EEEEecCCCCCCcCEEEECCCCCC-CCCCEEEEEECCCCcHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCEE
Confidence 345554445668999998753221 1357999999999999999999999999999999999999999999999888899
Q ss_pred EEEEEecC
Q psy2533 172 TLEIAKQG 179 (684)
Q Consensus 172 ~LvV~R~~ 179 (684)
.|+|.|..
T Consensus 188 ~l~v~R~~ 195 (196)
T 1p1d_A 188 KLKIRKDE 195 (196)
T ss_dssp EEEEECCC
T ss_pred EEEEEeCC
Confidence 99998864
No 213
>2i04_A Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1; PDZ, E6 binding, tumor suppressor, peptide binding protein; 2.15A {Mus musculus}
Probab=98.76 E-value=1.8e-08 Score=84.99 Aligned_cols=57 Identities=19% Similarity=0.348 Sum_probs=51.1
Q ss_pred CCcEEEecc--hhhhhcCCCCCCCEEEEECCEecCCCCHHHHHHHHHhC--CCeEEEEEEe
Q psy2533 273 PERFYQNLS--VYRNQNGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRT--GPIVTLEIAK 329 (684)
Q Consensus 273 ~GIFV~sI~--GaAardGrLr~GDqIL~VNG~sl~g~Th~eAv~lLk~s--g~~VtL~V~R 329 (684)
.++||..|. ++|++.|.|++||+|++|||..+.++++.++..+|+.. +..|.|.|.|
T Consensus 25 ~~~~V~~v~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R 85 (85)
T 2i04_A 25 EFLQIKSLVLDGPAALDGKMETGDVIVSVNDTCVLGHTHAQVVKIFQSIPIGASVDLELCR 85 (85)
T ss_dssp BCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTSCTTCEEEEEEEC
T ss_pred CCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCeEEEEEEC
Confidence 468888887 78888888999999999999999999999999999986 6889999865
No 214
>2vsp_A PDZ domain-containing protein 1; membrane, cytoplasm, phosphoprotein, transport protein, CAsp; 2.60A {Homo sapiens} PDB: 2eej_A
Probab=98.76 E-value=1.9e-08 Score=86.15 Aligned_cols=58 Identities=22% Similarity=0.354 Sum_probs=48.5
Q ss_pred CcEEEecc--hhhhhcCCCCCCCEEEEECCEecCCCCHHHHHHHHHhCCCeEEEEEEeCCc
Q psy2533 274 ERFYQNLS--VYRNQNGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGPIVTLEIAKQGA 332 (684)
Q Consensus 274 GIFV~sI~--GaAardGrLr~GDqIL~VNG~sl~g~Th~eAv~lLk~sg~~VtL~V~R~~~ 332 (684)
|++|..|. ++|++.| |++||+|++|||+++.++++.++..+|+..+..|.|.|.|.+.
T Consensus 28 g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v~l~v~r~~~ 87 (91)
T 2vsp_A 28 GSFIKEVQKGGPADLAG-LEDEDVIIEVNGVNVLDEPYEKVVDRIQSSGKNVTLLVCGKKA 87 (91)
T ss_dssp CCBC-CCCTTSHHHHTT-CCTTCEEEEETTEECTTSCHHHHHHHHTTSCSEEEEEEEC---
T ss_pred CeEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCEEEEEEEeCCc
Confidence 45666665 6788877 9999999999999999999999999999888899999998764
No 215
>2kv8_A RGS12, regulator of G-protein signaling 12; PDZ domain, signaling protein; NMR {Homo sapiens}
Probab=98.76 E-value=1.9e-08 Score=84.65 Aligned_cols=56 Identities=20% Similarity=0.262 Sum_probs=47.5
Q ss_pred cEEEecc--hhhhhcCCCCCCCEEEEECCEecCCCCHHHHHHHHHhCCCeEEEEEEeCC
Q psy2533 275 RFYQNLS--VYRNQNGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGPIVTLEIAKQG 331 (684)
Q Consensus 275 IFV~sI~--GaAardGrLr~GDqIL~VNG~sl~g~Th~eAv~lLk~sg~~VtL~V~R~~ 331 (684)
++|..|. ++|++.| |++||+|++|||..+.+++|.+++.+|+..+..|+|.|.|..
T Consensus 25 ~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v~l~v~R~~ 82 (83)
T 2kv8_A 25 CVLSCVMRGSPADFVG-LRAGDQILAVNEINVKKASHEDVVKLIGKCSGVLHMVIAEGV 82 (83)
T ss_dssp CBCCBCCTTSTTTTTT-CCTTCEEEEETTEECSSCCHHHHHHHHTTCSSCEEEEEECCC
T ss_pred eEEEEeCCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEEEEEEcCC
Confidence 4444554 5677776 999999999999999999999999999988888999998863
No 216
>2jil_A GRIP1 protein, glutamate receptor interacting protein-1; endoplasmic reticulum, postsynaptic membrane, membrane, MEMB protein; 1.5A {Homo sapiens}
Probab=98.75 E-value=1.3e-08 Score=87.91 Aligned_cols=61 Identities=26% Similarity=0.376 Sum_probs=55.6
Q ss_pred CCCcEEEecc--hhhhhcCCCCCCCEEEEECCEecCCCCHHHHHHHHHhCCCeEEEEEEeCCc
Q psy2533 272 DPERFYQNLS--VYRNQNGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGPIVTLEIAKQGA 332 (684)
Q Consensus 272 d~GIFV~sI~--GaAardGrLr~GDqIL~VNG~sl~g~Th~eAv~lLk~sg~~VtL~V~R~~~ 332 (684)
..|+||..|. ++|++.|+|++||+|++|||.++.++++.++..+|+..+..+.|.|.|.+.
T Consensus 31 ~~~~~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v~l~v~R~~~ 93 (97)
T 2jil_A 31 SRPVVITSVRPGGPADREGTIKPGDRLLSVDGIRLLGTTHAEAMSILKQCGQEAALLIEYDVS 93 (97)
T ss_dssp CEEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHHHSCSEEEEEEEEECC
T ss_pred CCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEeCCC
Confidence 4578999987 789998889999999999999999999999999999988999999999764
No 217
>2q9v_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; Cys Ser mutant, S genomics consortium, SGC, transferase; 2.00A {Homo sapiens}
Probab=98.75 E-value=1.1e-08 Score=87.18 Aligned_cols=58 Identities=21% Similarity=0.462 Sum_probs=52.1
Q ss_pred CcEEEecc--hhhhhcCCCCCCCEEEEECCEecCCCCHHHHHHHHHhCCC--eEEEEEEeCC
Q psy2533 274 ERFYQNLS--VYRNQNGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGP--IVTLEIAKQG 331 (684)
Q Consensus 274 GIFV~sI~--GaAardGrLr~GDqIL~VNG~sl~g~Th~eAv~lLk~sg~--~VtL~V~R~~ 331 (684)
++||..|. ++|++.|.|++||+|++|||.++.++++.+++.+|+..+. .|+|.|.|..
T Consensus 28 ~~~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~~~v~l~v~R~~ 89 (90)
T 2q9v_A 28 PIYIGHIVPLGAADTDGRLRSGDELISVDGTPVIGKSHQLVVQLMQQAAKQGHVNLTVRQTR 89 (90)
T ss_dssp CEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTSCHHHHHHHHHHHHHHTEEEEEEEECC
T ss_pred CEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCeEEEEEEecc
Confidence 58888887 7999998899999999999999999999999999998754 8999998863
No 218
>2vwr_A Ligand of NUMB protein X 2; protein-binding, metal-binding, zinc, LNX2_human, zinc-finger, polymorphism, ring finger protein 1; 1.3A {Homo sapiens}
Probab=98.75 E-value=2e-08 Score=86.61 Aligned_cols=61 Identities=34% Similarity=0.471 Sum_probs=56.1
Q ss_pred CCcEEEecc--hhhhhcCCCCCCCEEEEECCEecCCCCHHHHHHHHHhCCCeEEEEEEeCCcc
Q psy2533 273 PERFYQNLS--VYRNQNGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGPIVTLEIAKQGAI 333 (684)
Q Consensus 273 ~GIFV~sI~--GaAardGrLr~GDqIL~VNG~sl~g~Th~eAv~lLk~sg~~VtL~V~R~~~~ 333 (684)
.|+||..|. ++|++.|.|++||+|++|||.++.++++.+++.+++..+..|.|.|.|.+..
T Consensus 29 ~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~g~~v~l~v~R~~~~ 91 (95)
T 2vwr_A 29 PGVFILDLLEGGLAAQDGRLSSNDRVLAINGHDLKYGTPELAAQIIQASGERVNLTIARPGKP 91 (95)
T ss_dssp CSEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHCCSEEEEEEEEESCS
T ss_pred CCEEEEEeCCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCEEEEEEEcCCcC
Confidence 479999997 8999999999999999999999999999999999999999999999997643
No 219
>2djt_A Unnamed protein product; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.74 E-value=2.1e-08 Score=87.80 Aligned_cols=61 Identities=28% Similarity=0.380 Sum_probs=54.8
Q ss_pred CCcEEEecc--hhhhhcCCCCCCCEEEEECCEecCCCCHHHHHHHHHhCCCeEEEEEEeCCcc
Q psy2533 273 PERFYQNLS--VYRNQNGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGPIVTLEIAKQGAI 333 (684)
Q Consensus 273 ~GIFV~sI~--GaAardGrLr~GDqIL~VNG~sl~g~Th~eAv~lLk~sg~~VtL~V~R~~~~ 333 (684)
.++||..|. ++|++.|.|++||+|++|||+.+.++++.+++.+|+..+..|.|.|.|.+..
T Consensus 38 ~~v~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~g~~v~l~v~R~g~~ 100 (104)
T 2djt_A 38 TPLAVRGLLKDGPAQRCGRLEVGDLVLHINGESTQGLTHAQAVERIRAGGPQLHLVIRRPLSG 100 (104)
T ss_dssp CCCEEEEECTTCHHHHHCSCCTTCBEEEETTEECTTCCHHHHHHHHHHTCSEEEEEECCCCCC
T ss_pred CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEECCCC
Confidence 468898887 7888888899999999999999999999999999998889999999887643
No 220
>2iwo_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP-1, HOST-virus interaction, structural genomics consortium, synaptosome, tight junction; 1.7A {Homo sapiens} PDB: 2iwp_A
Probab=98.74 E-value=1.7e-08 Score=91.83 Aligned_cols=61 Identities=20% Similarity=0.365 Sum_probs=56.1
Q ss_pred CCcEEEecc--hhhhhcCCCCCCCEEEEECCEecCCCCHHHHHHHHHhCCCeEEEEEEeCCcc
Q psy2533 273 PERFYQNLS--VYRNQNGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGPIVTLEIAKQGAI 333 (684)
Q Consensus 273 ~GIFV~sI~--GaAardGrLr~GDqIL~VNG~sl~g~Th~eAv~lLk~sg~~VtL~V~R~~~~ 333 (684)
.++||..|. |+|++.|+|++||+|++|||+++.++++.+++.+|+.++..|+|.|.|.+..
T Consensus 53 ~~~~V~~V~~~spA~~aggL~~GD~Il~VnG~~v~~~~~~~~~~~l~~~~~~v~l~v~r~g~~ 115 (120)
T 2iwo_A 53 VPIFIAMMHPTGVAAQTQKLRVGDRIVTICGTSTEGMTHTQAVNLLKNASGSIEMQVVAGGDV 115 (120)
T ss_dssp EEEEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCBHHHHHHHHHHCCSEEEEEEECCTTS
T ss_pred CCEEEEEECCCCHHHHhCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEECCcc
Confidence 468999987 7999998899999999999999999999999999999999999999987643
No 221
>2qg1_A Multiple PDZ domain protein; MPDZ, MUPP1, structural genomics, structural genomics consortium, SGC, signaling protein; 1.40A {Homo sapiens}
Probab=98.74 E-value=2.6e-08 Score=85.23 Aligned_cols=60 Identities=32% Similarity=0.440 Sum_probs=55.3
Q ss_pred CCcEEEecc--hhhhhcCCCCCCCEEEEECCEecCCCCHHHHHHHHHhCCCeEEEEEEeCCc
Q psy2533 273 PERFYQNLS--VYRNQNGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGPIVTLEIAKQGA 332 (684)
Q Consensus 273 ~GIFV~sI~--GaAardGrLr~GDqIL~VNG~sl~g~Th~eAv~lLk~sg~~VtL~V~R~~~ 332 (684)
.|+||..|. ++|++.|.|++||+|++|||+++.++++.++..+++..+..|.|.|.|++.
T Consensus 29 ~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~l~v~R~~~ 90 (92)
T 2qg1_A 29 TGVFVSDIVKGGIADADGRLMQGDQILMVNGEDVRNATQEAVAALLKCSLGTVTLEVGRIST 90 (92)
T ss_dssp CSCEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCCHHHHHHHHHHCCSEEEEEEECCCC
T ss_pred CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEcccc
Confidence 478999987 799999999999999999999999999999999999999999999998763
No 222
>2r4h_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; transferase, STRU genomics, structural genomics consortium, SGC, ATP-binding; HET: HIS; 2.05A {Homo sapiens}
Probab=98.74 E-value=1.5e-08 Score=90.61 Aligned_cols=60 Identities=18% Similarity=0.397 Sum_probs=54.3
Q ss_pred CCcEEEecc--hhhhhcCCCCCCCEEEEECCEecCCCCHHHHHHHHHhCCCeEEEEEEeCCc
Q psy2533 273 PERFYQNLS--VYRNQNGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGPIVTLEIAKQGA 332 (684)
Q Consensus 273 ~GIFV~sI~--GaAardGrLr~GDqIL~VNG~sl~g~Th~eAv~lLk~sg~~VtL~V~R~~~ 332 (684)
.|++|..|. ++|++.|.|++||+|++|||+++.++++.+++.+++..+..|+|.|.|.+.
T Consensus 49 ~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~g~~v~l~v~R~~~ 110 (112)
T 2r4h_A 49 MDLYVLRLAEDGPAERSGKMRIGDEILEINGETTKNMKHSRAIELIKNGGRRVRLFLKRGET 110 (112)
T ss_dssp CCEEEEEECTTSHHHHTTCCCTTCEEEEETTEECTTCCHHHHHHHHHTTTTEEEEEEECCEE
T ss_pred CCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEeCCc
Confidence 478898887 788888889999999999999999999999999999888999999988653
No 223
>2f5y_A Regulator of G-protein signalling 3 isoform 1; PDZ domain, RGS-3, human, structural genomics, structural GE consortium, SGC, signaling protein; 2.39A {Homo sapiens} SCOP: b.36.1.1
Probab=98.74 E-value=2.5e-08 Score=85.54 Aligned_cols=60 Identities=13% Similarity=0.039 Sum_probs=51.2
Q ss_pred CcEEEecc--hhhhhcCCCCCCCEEEEECCEecCCCCHHHHHHHHHhCCCeEEEEEEeCCccc
Q psy2533 274 ERFYQNLS--VYRNQNGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGPIVTLEIAKQGAIY 334 (684)
Q Consensus 274 GIFV~sI~--GaAardGrLr~GDqIL~VNG~sl~g~Th~eAv~lLk~sg~~VtL~V~R~~~~~ 334 (684)
+++|..|. ++|++.| |++||+|++|||..+.++++.++..+|+..+..+.|.|.|.....
T Consensus 25 ~~~V~~V~~~spA~~aG-l~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~~v~l~v~R~~~~~ 86 (91)
T 2f5y_A 25 PVRVQAVDSGGPAERAG-LQQLDTVLQLNERPVEHWKCVELAHEIRSCPSEIILLVWRMVPQV 86 (91)
T ss_dssp SCEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHTCSSEEEEEEEECC---
T ss_pred CEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEeCCCCC
Confidence 46777776 6888877 999999999999999999999999999988889999999976443
No 224
>1va8_A Maguk P55 subfamily member 5; PDZ domain, palmitoylated 5, PALS1 protein, structural genomics, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.74 E-value=3.8e-08 Score=88.11 Aligned_cols=60 Identities=15% Similarity=0.273 Sum_probs=54.0
Q ss_pred CCcEEEecc--hhhhhcCCCCCCCEEEEECCEecCCCCHHHHHHHHHhCCCeEEEEEEeCCc
Q psy2533 273 PERFYQNLS--VYRNQNGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGPIVTLEIAKQGA 332 (684)
Q Consensus 273 ~GIFV~sI~--GaAardGrLr~GDqIL~VNG~sl~g~Th~eAv~lLk~sg~~VtL~V~R~~~ 332 (684)
.|+||..|. ++|++.|.|++||+|++|||+.+.++++.+++.+|+..+..|+|.|.|.+.
T Consensus 48 ~gv~V~~V~~~spA~~aGll~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~~v~l~v~r~~~ 109 (113)
T 1va8_A 48 DSVIISRIVKGGAAEKSGLLHEGDEVLEINGIEIRGKDVNEVFDLLSDMHGTLTFVLIPSSG 109 (113)
T ss_dssp SSEEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCCHHHHHHHHHHCCEEEEEEEECCCC
T ss_pred CCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEECCc
Confidence 468898887 789998866999999999999999999999999999988899999998764
No 225
>3qe1_A Sorting nexin-27, G protein-activated inward RECT potassium channel 3 chimera; PDZ domain, PDZ binding, GIRK3 regulation, early endosomes; 1.68A {Rattus norvegicus} SCOP: b.36.1.0 PDB: 3qdo_A 3qgl_A
Probab=98.73 E-value=2.7e-08 Score=87.58 Aligned_cols=60 Identities=17% Similarity=0.332 Sum_probs=54.3
Q ss_pred CCCcEEEecc--hhhhhcCCCCCCCEEEEECCEecCCCCHHHHHHHHHhCCCeEEEEEEeCCc
Q psy2533 272 DPERFYQNLS--VYRNQNGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGPIVTLEIAKQGA 332 (684)
Q Consensus 272 d~GIFV~sI~--GaAardGrLr~GDqIL~VNG~sl~g~Th~eAv~lLk~sg~~VtL~V~R~~~ 332 (684)
.+++||..|. ++|++.| |++||+|++|||..+.++++.+++.+|+..+..|.|.|.|...
T Consensus 42 ~p~~~V~~v~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v~l~v~r~~~ 103 (107)
T 3qe1_A 42 APLQHVSAVLPGGAADRAG-VRKGDRILEVNGVNVEGATHKQVVDLIRAGEKELILTVLSVES 103 (107)
T ss_dssp SCCEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHHCSSEEEEEEECSSC
T ss_pred CCceEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCEEEEEEEcCCC
Confidence 4567899987 7888888 9999999999999999999999999999999999999998753
No 226
>3cbz_A Dishevelled-2; PDZ domain, phage derived high affinity ligand, cytoplasm, developmental protein, phosphoprotein, WNT signaling pathway; 1.38A {Homo sapiens} PDB: 3cby_A 3cc0_A 3cbx_A 2rey_A 2f0a_A 1l6o_A 3fy5_A 2kaw_A* 1mc7_A
Probab=98.73 E-value=1.9e-08 Score=89.54 Aligned_cols=61 Identities=23% Similarity=0.383 Sum_probs=55.0
Q ss_pred CCCcEEEecc--hhhhhcCCCCCCCEEEEECCEecCCCCHHHHHHHHHhC---CCeEEEEEEeCCc
Q psy2533 272 DPERFYQNLS--VYRNQNGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRT---GPIVTLEIAKQGA 332 (684)
Q Consensus 272 d~GIFV~sI~--GaAardGrLr~GDqIL~VNG~sl~g~Th~eAv~lLk~s---g~~VtL~V~R~~~ 332 (684)
..|+||..|. ++|++.|+|++||+|++|||+++.+++|++++.+|+.+ +..|+|.|.|+..
T Consensus 32 ~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~~~~v~l~v~R~~~ 97 (108)
T 3cbz_A 32 DGGIYIGSIMKGGAVAADGRIEPGDMLLQVNDMNFENMSNDDAVRVLRDIVHKPGPIVLTVAKSGG 97 (108)
T ss_dssp CCEEEEEEECTTSHHHHHCCCCTTCEEEEETTEETTSCCHHHHHHHHHHHHTSSSCEEEEEECCCC
T ss_pred CCCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhcccCCCeEEEEEEeCCC
Confidence 4689999997 89999999999999999999999999999999999887 4579999998653
No 227
>1z87_A Alpha-1-syntrophin; protein binding; NMR {Mus musculus}
Probab=98.73 E-value=2.8e-08 Score=102.63 Aligned_cols=62 Identities=26% Similarity=0.365 Sum_probs=56.5
Q ss_pred CCcEEEecc--hhhhhcCCCCCCCEEEEECCEecCCCCHHHHHHHHHhCCCeEEEEEEeCCccc
Q psy2533 273 PERFYQNLS--VYRNQNGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGPIVTLEIAKQGAIY 334 (684)
Q Consensus 273 ~GIFV~sI~--GaAardGrLr~GDqIL~VNG~sl~g~Th~eAv~lLk~sg~~VtL~V~R~~~~~ 334 (684)
.|+||..|. ++|+++++|++||+|++|||+++.+++|.+++.+|+..+..|+|.|.|.....
T Consensus 103 ~gi~V~~V~~gspA~~~aGL~~GD~Il~VNG~~v~~~t~~e~v~~l~~~g~~V~L~V~R~~~~~ 166 (263)
T 1z87_A 103 MPILISKIFKGLAADQTEALFVGDAILSVNGEDLSSATHDEAVQALKKTGKEVVLEVKYMKEVS 166 (263)
T ss_dssp EEEEEEECCTTSHHHHCTTCCSSCEEEEESSCBCTTSCHHHHHHHHHHCCSCCCEEEECCSSSS
T ss_pred CCEEEEEECCCCHHHHhCCCCCCCEEEEECCEECCCcCHHHHHHHHhcCCCeEEEEEEeCcccc
Confidence 478999997 78888888999999999999999999999999999999999999999976543
No 228
>3r68_A Na(+)/H(+) exchange regulatory cofactor NHE-RF3; PDZ domain, adaptor protein, SR-BI, signaling protein; 1.30A {Mus musculus} SCOP: b.36.1.0 PDB: 3r69_A*
Probab=98.72 E-value=2.7e-08 Score=85.49 Aligned_cols=59 Identities=17% Similarity=0.334 Sum_probs=52.9
Q ss_pred CCcEEEecc--hhhhhcCCCCCCCEEEEECCEecCCCCHHHHHHHHHhCCCeEEEEEEeCCc
Q psy2533 273 PERFYQNLS--VYRNQNGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGPIVTLEIAKQGA 332 (684)
Q Consensus 273 ~GIFV~sI~--GaAardGrLr~GDqIL~VNG~sl~g~Th~eAv~lLk~sg~~VtL~V~R~~~ 332 (684)
.++||..|. ++|++.| |++||+|++|||..+.+++|.+++.+|+..+..+.+.+.|++.
T Consensus 29 ~~~~V~~v~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~~~~~~~r~~~ 89 (95)
T 3r68_A 29 KGQIIKDIEPGSPAEAAG-LKNNDLVVAVNGKSVEALDHDGVVEMIRKGGDQTTLLVLDKEL 89 (95)
T ss_dssp CSEEEECCCTTSHHHHHT-CCTTEEEEEETTEECTTCCHHHHHHHHHTTTTEEEEEEEECC-
T ss_pred CCEEEEEECCCCHHHHCC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEEEEEECCcc
Confidence 367888887 7888888 9999999999999999999999999999999999999988764
No 229
>2db5_A INAD-like protein; PDZ domain, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ, structural genomics; NMR {Homo sapiens}
Probab=98.72 E-value=2.3e-08 Score=91.16 Aligned_cols=61 Identities=21% Similarity=0.372 Sum_probs=56.0
Q ss_pred CCCcEEEecc--hhhhhcCCCCCCCEEEEECCEecC-CCCHHHHHHHHHhCCCeEEEEEEeCCc
Q psy2533 272 DPERFYQNLS--VYRNQNGRLQAGDQLLKVDGQSLV-GITQEKAAEYLVRTGPIVTLEIAKQGA 332 (684)
Q Consensus 272 d~GIFV~sI~--GaAardGrLr~GDqIL~VNG~sl~-g~Th~eAv~lLk~sg~~VtL~V~R~~~ 332 (684)
..|+||..|. ++|++.|+|++||+|++|||+++. ++++.+++.+|+..+..|.|.|.|...
T Consensus 53 ~~gv~V~~V~~~spA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~~l~~~~~~v~l~v~r~~~ 116 (128)
T 2db5_A 53 KVDIFVKDVQPGSVADRDQRLKENDQILAINHTPLDQNISHQQAIALLQQTTGSLRLIVAREPV 116 (128)
T ss_dssp CEEEEEECCCTTSHHHHTCCCCSSCBEEEESSCBCSTTSCHHHHHHHHHHCCSEEEEEEEECCC
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCCHHHHHHHHHcCCCeEEEEEEcCCC
Confidence 3578999997 799999999999999999999997 999999999999999999999999754
No 230
>1wfv_A Membrane associated guanylate kinase inverted-2; atrophin-1 interacting protein 1, activin receptor interacting protein 1; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.72 E-value=1.9e-08 Score=87.70 Aligned_cols=61 Identities=25% Similarity=0.396 Sum_probs=54.1
Q ss_pred CcEEEecc--hhhhhcCCCCCCCEEEEECCEecCCCCHHHHHHHHHhCCCeEEEEEEeCCccc
Q psy2533 274 ERFYQNLS--VYRNQNGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGPIVTLEIAKQGAIY 334 (684)
Q Consensus 274 GIFV~sI~--GaAardGrLr~GDqIL~VNG~sl~g~Th~eAv~lLk~sg~~VtL~V~R~~~~~ 334 (684)
++||..|. ++|++.|.|++||+|++|||+++.++++.+++.+++..+..|.|.|.|.+...
T Consensus 37 ~~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~g~~v~l~v~R~~~~~ 99 (103)
T 1wfv_A 37 DLYVLRLAEDGPAIRNGRMRVGDQIIEINGESTRDMTHARAIELIKSGGRRVRLLLKRGTGSG 99 (103)
T ss_dssp EEECCCBCTTSHHHHHCSSCTTCEEEEETTEECSSCCHHHHHHHHHHHCSEECEEEECTTCSS
T ss_pred CEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEECCCCC
Confidence 67777776 78888888999999999999999999999999999988899999999876543
No 231
>1wg6_A Hypothetical protein (riken cDNA 2810455B10); structural genomics, PDZ domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.36.1.1 PDB: 2koh_A 2k1z_A 2k20_A
Probab=98.71 E-value=1.5e-08 Score=92.89 Aligned_cols=61 Identities=30% Similarity=0.481 Sum_probs=55.7
Q ss_pred CCCcEEEecc--hhhhhcCCCCCCCEEEEECCEecCCCCHHHHHHHHHhC-------CCeEEEEEEeCCc
Q psy2533 272 DPERFYQNLS--VYRNQNGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRT-------GPIVTLEIAKQGA 332 (684)
Q Consensus 272 d~GIFV~sI~--GaAardGrLr~GDqIL~VNG~sl~g~Th~eAv~lLk~s-------g~~VtL~V~R~~~ 332 (684)
+.++||..|. ++|+++|+|++||+|++|||+++.+++|.+++.+|+.+ +..|+|.|.|...
T Consensus 54 ~~gi~V~~V~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~~g~~~~~v~l~v~R~~~ 123 (127)
T 1wg6_A 54 DLGIFIKSIIHGGAAFKDGRLRMNDQLIAVNGETLLGKSNHEAMETLRRSMSMEGNIRGMIQLVILRRSG 123 (127)
T ss_dssp EEEEEEEECCSSSSTHHHHTSCSCCBEEEETTEESTTSCHHHHHHHHHHHHHHHHHHTCEEEEEEEECSC
T ss_pred CCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHHhhccccCCCCEEEEEEEeCCC
Confidence 3578999997 89999999999999999999999999999999999976 7899999999754
No 232
>2koj_A Partitioning defective 3 homolog; PDZ domain, structural genomics, alternative splicing, cell cycle, cell division, cell junction, coiled coil; NMR {Mus musculus} PDB: 2ogp_A
Probab=98.71 E-value=3.9e-08 Score=87.07 Aligned_cols=63 Identities=33% Similarity=0.507 Sum_probs=56.2
Q ss_pred CCcEEEecc--hhhhhcCCCCCCCEEEEECCEecCCCCHHHHHHHHHhC--CCeEEEEEEeCCcccc
Q psy2533 273 PERFYQNLS--VYRNQNGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRT--GPIVTLEIAKQGAIYH 335 (684)
Q Consensus 273 ~GIFV~sI~--GaAardGrLr~GDqIL~VNG~sl~g~Th~eAv~lLk~s--g~~VtL~V~R~~~~~~ 335 (684)
.|+||..|. ++|++.|+|++||+|++|||+.+.++++.+++.+|+.. +..|.|.|.|.+..+.
T Consensus 39 ~g~~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~~~~~~ 105 (111)
T 2koj_A 39 APIYVKNILPRGAAIQDGRLKAGDRLIEVNGVDLAGKSQEEVVSLLRSTKMEGTVSLLVFRQEEAFH 105 (111)
T ss_dssp SCEEEEEECSSSHHHHHCSSCTTCEEEEETTEECTTSCHHHHHHHHHHCCCSSEEEEEEEECCCCCC
T ss_pred cCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCeEEEEEEeCCCCcc
Confidence 578999997 78898888999999999999999999999999999985 7899999999875443
No 233
>2la8_A Inactivation-NO-after-potential D protein, KON-TI peptide; peptide binding protein; NMR {Drosophila melanogaster}
Probab=98.71 E-value=3.7e-08 Score=87.72 Aligned_cols=63 Identities=19% Similarity=0.263 Sum_probs=56.4
Q ss_pred CCcEEEecc--hhhhhcCCCCCCCEEEEECCEecCCCCHHHHHHHHHhCCCeEEEEEEeCCcccc
Q psy2533 273 PERFYQNLS--VYRNQNGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGPIVTLEIAKQGAIYH 335 (684)
Q Consensus 273 ~GIFV~sI~--GaAardGrLr~GDqIL~VNG~sl~g~Th~eAv~lLk~sg~~VtL~V~R~~~~~~ 335 (684)
.|+||..|. |+|++.|+|++||+|++|||+++.++++.+++.+++..++.|.|.|.|.....+
T Consensus 25 ~gv~V~~V~~gspA~~aG~L~~GD~Il~Ing~~v~~~~~~~~~~~~~~~~~~v~l~v~R~~~~~~ 89 (106)
T 2la8_A 25 IGCTIADLIQGQYPEIDSKLQRGDIITKFNGDALEGLPFQVCYALFKGANGKVSMEVTRPKPGSG 89 (106)
T ss_dssp SSEEEEECCTTSCHHHHTTCCTTCEEEEESSCBCSSSCHHHHHHHHHSCBSCEEEEEEECCSCSS
T ss_pred CCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHhCCCCeEEEEEEeCCCCCC
Confidence 478999987 799999999999999999999999999999999999988899999999754433
No 234
>1v62_A KIAA1719 protein; structural genomics, synaptic transmission, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.70 E-value=2.8e-08 Score=89.57 Aligned_cols=60 Identities=23% Similarity=0.306 Sum_probs=55.4
Q ss_pred CcEEEecc--hhhhhcCCCCCCCEEEEECCEecCCCCHHHHHHHHHhCCCeEEEEEEeCCcc
Q psy2533 274 ERFYQNLS--VYRNQNGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGPIVTLEIAKQGAI 333 (684)
Q Consensus 274 GIFV~sI~--GaAardGrLr~GDqIL~VNG~sl~g~Th~eAv~lLk~sg~~VtL~V~R~~~~ 333 (684)
++||..|. ++|++.|+|++||+|++|||+.+.++++++++.+|+..+..|+|.|.|....
T Consensus 43 ~~~V~~V~~~spA~~aG~l~~GD~Il~Ing~~v~~~~~~~~~~~l~~~g~~v~l~v~r~~~~ 104 (117)
T 1v62_A 43 VITIDRIKPASVVDRSGALHPGDHILSIDGTSMEHCSLLEATKLLASISEKVRLEILPVPQS 104 (117)
T ss_dssp EEEEEECCTTSHHHHHTCCCTTCBEEEETTEETTSCCHHHHHHHHHSCSSEEEEEECCBTTB
T ss_pred CEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEEEEEEECCCC
Confidence 58999997 8999999999999999999999999999999999998899999999987643
No 235
>2dc2_A GOPC, golgi associated PDZ and coiled-coil motif containing isoform B; GOPC PDZ domain, structural protein; NMR {Homo sapiens}
Probab=98.70 E-value=2.8e-08 Score=87.57 Aligned_cols=62 Identities=19% Similarity=0.289 Sum_probs=54.0
Q ss_pred CcEEEecc--hhhhhcCCCCCCCEEEEECCEecCCCCHHHHHHHHHhCCCeEEEEEEeCCcccc
Q psy2533 274 ERFYQNLS--VYRNQNGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGPIVTLEIAKQGAIYH 335 (684)
Q Consensus 274 GIFV~sI~--GaAardGrLr~GDqIL~VNG~sl~g~Th~eAv~lLk~sg~~VtL~V~R~~~~~~ 335 (684)
++||..|. ++|+++++|++||+|++|||.++.++++.+++.+|+.++..|+|+|.+.....+
T Consensus 36 ~~~V~~V~~~s~A~~a~gL~~GD~Il~Ing~~v~~~~~~~~~~~l~~~~~~v~l~v~~~~~~~~ 99 (103)
T 2dc2_A 36 PILISEIHPGQPADRCGGLHVGDAILAVNGVNLRDTKHKEAVTILSQQRGEIEFEVVYVALEHH 99 (103)
T ss_dssp EEEEEEECTTSHHHHHTCCCSSEEEEEETTEESTTSCHHHHHHHHHHCCSEEEEEEEECC----
T ss_pred CEEEEEECCCCHHHHhCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCcEEEEEEecCCcch
Confidence 67888887 788887789999999999999999999999999999999999999999766543
No 236
>1ujd_A KIAA0559 protein; PDZ domain, structural genomics, human cDNA, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.70 E-value=2.2e-08 Score=90.23 Aligned_cols=63 Identities=16% Similarity=0.196 Sum_probs=57.3
Q ss_pred CCCcEEEecc--hhhhhcCCCCCCCEEEEECCEecCCCCHHHHHHHHHhCCCeEEEEEEeCCccc
Q psy2533 272 DPERFYQNLS--VYRNQNGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGPIVTLEIAKQGAIY 334 (684)
Q Consensus 272 d~GIFV~sI~--GaAardGrLr~GDqIL~VNG~sl~g~Th~eAv~lLk~sg~~VtL~V~R~~~~~ 334 (684)
..|+||..|. ++|++.|+|++||+|++|||+++.+++|.+++.+|+..+..|+|.|.|.....
T Consensus 48 ~~g~~V~~v~~~s~A~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~l~~~~~~v~l~v~R~~~~~ 112 (117)
T 1ujd_A 48 EIGAYIAKILPGGSAEQTGKLMEGMQVLEWNGIPLTSKTYEEVQSIISQQSGEAEICVRLDLNMS 112 (117)
T ss_dssp CEEEEEEEECTTCHHHHHSSCCTTCEEEEETTEECTTCCHHHHHHHHSCCSSCEEEEEESSCCCC
T ss_pred CcCEEEEEECCCCHHHHcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCEEEEEEEECCccc
Confidence 3578999997 79999999999999999999999999999999999999999999999876544
No 237
>2eei_A PDZ domain-containing protein 1; regulatory factor, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.69 E-value=4.7e-08 Score=85.87 Aligned_cols=60 Identities=17% Similarity=0.336 Sum_probs=53.2
Q ss_pred CCcEEEecc--hhhhhcCCCCCCCEEEEECCEecCCCCHHHHHHHHHhCCCeEEEEEEeCCcc
Q psy2533 273 PERFYQNLS--VYRNQNGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGPIVTLEIAKQGAI 333 (684)
Q Consensus 273 ~GIFV~sI~--GaAardGrLr~GDqIL~VNG~sl~g~Th~eAv~lLk~sg~~VtL~V~R~~~~ 333 (684)
.|+||..|. ++|++.| |++||+|++|||+++.++++.+++.+++..+..+.|.|.|++..
T Consensus 32 ~g~~V~~V~~~spA~~aG-l~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~l~v~r~~~~ 93 (106)
T 2eei_A 32 KGVYMTDITPQGVAMRAG-VLADDHLIEVNGENVEDASHEEVVEKVKKSGSRVMFLLVDKETD 93 (106)
T ss_dssp CSCEECCCCTTSHHHHHT-CCSSEEEEEETTEECTTCCHHHHHHHHHHHCSEEEEEECCTTTS
T ss_pred CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEEEEEEcCchh
Confidence 467888886 7888887 99999999999999999999999999998889999999987643
No 238
>1mfg_A ERB-B2 interacting protein; PDZ domain, protein-peptide complex, erbin., signaling protein; 1.25A {Homo sapiens} SCOP: b.36.1.1 PDB: 1mfl_A
Probab=98.69 E-value=4.2e-08 Score=84.52 Aligned_cols=59 Identities=24% Similarity=0.337 Sum_probs=53.4
Q ss_pred CCCCcEEEecc--hhhhhcCCCCCCCEEEEECCEecCCCCHHHHHHHHHhCCCeEEEEEEeCC
Q psy2533 271 ADPERFYQNLS--VYRNQNGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGPIVTLEIAKQG 331 (684)
Q Consensus 271 ~d~GIFV~sI~--GaAardGrLr~GDqIL~VNG~sl~g~Th~eAv~lLk~sg~~VtL~V~R~~ 331 (684)
...|+||..|. ++|++ +|++||+|++|||+++.++++.+++.+++..+..|.|.|.|..
T Consensus 33 ~~~gv~V~~V~~~spA~~--gL~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~l~v~R~~ 93 (95)
T 1mfg_A 33 DDDGIFVTRVQPEGPASK--LLQPGDKIIQANGYSFINIEHGQAVSLLKTFQNTVELIIVREV 93 (95)
T ss_dssp TCCCEEEEEECTTSTTTT--TCCTTCEEEEETTEECTTCBHHHHHHHHHHCCSEEEEEEEEEC
T ss_pred CCCCEEEEEECCCCchhh--CCCCCCEEEEECCEEcCCCCHHHHHHHhhcCCCeEEEEEEeCC
Confidence 35689999997 78887 6999999999999999999999999999999999999999864
No 239
>2v90_A PDZ domain-containing protein 3; membrane, protein-binding; 2.00A {Homo sapiens}
Probab=98.68 E-value=2.8e-08 Score=85.83 Aligned_cols=60 Identities=28% Similarity=0.511 Sum_probs=53.9
Q ss_pred CCcEEEecc--hhhhhcCCCCCCCEEEEECCEecCCCCHHHHHHHHHhCCCeEEEEEEeCCcc
Q psy2533 273 PERFYQNLS--VYRNQNGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGPIVTLEIAKQGAI 333 (684)
Q Consensus 273 ~GIFV~sI~--GaAardGrLr~GDqIL~VNG~sl~g~Th~eAv~lLk~sg~~VtL~V~R~~~~ 333 (684)
.|++|..|. ++|++.| |++||+|++|||..+.++++.++..+|+..+..|.|.|.|.+..
T Consensus 30 ~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v~l~v~r~~~~ 91 (96)
T 2v90_A 30 PGQFLWEVDPGLPAKKAG-MQAGDRLVAVAGESVEGLGHEETVSRIQGQGSCVSLTVVDPEAD 91 (96)
T ss_dssp EEEEEEEECTTSHHHHTT-CCTTEEEEEETTEECTTCCHHHHHHHHHTTTTEEEEEEECCCTT
T ss_pred CCeEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCEEEEEEECCCCc
Confidence 478888887 7888877 99999999999999999999999999999889999999997643
No 240
>1um7_A Synapse-associated protein 102; PDZ, discs large homolog 3, DLG3-human presynaptic protein, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.67 E-value=4.1e-08 Score=86.91 Aligned_cols=64 Identities=30% Similarity=0.368 Sum_probs=54.8
Q ss_pred CCcEEEecc--hhhhhcCCCCCCCEEEEECCEecCCCCHHHHHHHHHhCCCeEEEEEEeCCccccc
Q psy2533 273 PERFYQNLS--VYRNQNGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGPIVTLEIAKQGAIYHG 336 (684)
Q Consensus 273 ~GIFV~sI~--GaAardGrLr~GDqIL~VNG~sl~g~Th~eAv~lLk~sg~~VtL~V~R~~~~~~~ 336 (684)
.++||..|. ++|++.|+|++||+|++|||+.+.++++.+++.+++..+..|.|.|.|.+..+..
T Consensus 39 ~gv~V~~V~~~s~A~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~~~~~~~~v~l~v~r~~~~~~~ 104 (113)
T 1um7_A 39 EGIFVSFILAGGPADLSGELRRGDRILSVNGVNLRNATHEQAAAALKRAGQSVTIVAQYRPEEYSR 104 (113)
T ss_dssp CCCBCCCBCSSSHHHHTTCCCTTCEEEEESSCBCTTCCHHHHHHHHHSCCSEEEEEEECCHHHHHH
T ss_pred CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCcEEEEEEECcchhhh
Confidence 356666665 6888888899999999999999999999999999998899999999987665543
No 241
>2csj_A TJP2 protein; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.67 E-value=3.4e-08 Score=88.68 Aligned_cols=60 Identities=17% Similarity=0.323 Sum_probs=53.6
Q ss_pred CCCcEEEecc--hhhhhcCCCCCCCEEEEECCEecCCCCHHHHHHHHHhCCCeEEEEEEeCCcc
Q psy2533 272 DPERFYQNLS--VYRNQNGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGPIVTLEIAKQGAI 333 (684)
Q Consensus 272 d~GIFV~sI~--GaAardGrLr~GDqIL~VNG~sl~g~Th~eAv~lLk~sg~~VtL~V~R~~~~ 333 (684)
..|+||..|. ++|+ ++|++||+|++|||+++.++++.+++.+|+..+..|.|.|.|....
T Consensus 45 ~~gv~V~~V~~~spA~--~gL~~GD~I~~Vng~~v~~~~~~~~~~~l~~~~~~v~l~v~R~~~~ 106 (117)
T 2csj_A 45 ETSIVISDVLPGGPAD--GLLQENDRVVMVNGTPMEDVLHSFAVQQLRKSGKIAAIVVKRPRKV 106 (117)
T ss_dssp CCBCEEEEECTTSSHH--HHBCTTCEEEEESSCBCBTCCHHHHHHHHHHSCSEEEEEEEEEEEC
T ss_pred CCCEEEEEECCCCccc--ccCCCCCEEEEECCEECCCcCHHHHHHHHhcCCCeEEEEEEECCcc
Confidence 4689999997 6664 7799999999999999999999999999999999999999997543
No 242
>1wfg_A Regulating synaptic membrane exocytosis protein 2; PDZ domain, RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2css_A 1zub_A
Probab=98.66 E-value=3.8e-08 Score=90.73 Aligned_cols=61 Identities=25% Similarity=0.446 Sum_probs=55.4
Q ss_pred CCCcEEEecc--hhhhhcCCCCCCCEEEEECCEecCCCCHHHHHHHHHhCC--CeEEEEEEeCCc
Q psy2533 272 DPERFYQNLS--VYRNQNGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTG--PIVTLEIAKQGA 332 (684)
Q Consensus 272 d~GIFV~sI~--GaAardGrLr~GDqIL~VNG~sl~g~Th~eAv~lLk~sg--~~VtL~V~R~~~ 332 (684)
..|+||..|. ++|++.|+|++||+|++|||+++.+++|++++.+|+.+. ..|+|+|.|.+.
T Consensus 64 ~~gv~V~~V~~gspA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~g~ 128 (131)
T 1wfg_A 64 RLCAFITKVKKGSLADTVGHLRPGDEVLEWNGRLLQGATFEEVYNIILESKPEPQVELVVSRSGP 128 (131)
T ss_dssp CEEEEEEEECTTSHHHHTSCCCTTCEEEEETTEECTTCCHHHHHHHHHHTSSSSEEEEEEEEECS
T ss_pred CCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhcCCCCEEEEEEEcCCC
Confidence 4589999997 899999999999999999999999999999999999864 889999998754
No 243
>2yuy_A RHO GTPase activating protein 21; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.66 E-value=8.8e-08 Score=87.30 Aligned_cols=61 Identities=20% Similarity=0.363 Sum_probs=55.2
Q ss_pred CCCCcEEEecc--hhhhhcCCCCCCCEEEEECCEecCCCCHHHHHHHHHhCCCeEEEEEEeCCc
Q psy2533 271 ADPERFYQNLS--VYRNQNGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGPIVTLEIAKQGA 332 (684)
Q Consensus 271 ~d~GIFV~sI~--GaAardGrLr~GDqIL~VNG~sl~g~Th~eAv~lLk~sg~~VtL~V~R~~~ 332 (684)
.+.+++|..|. ++|++.| |++||+|++|||+++.++++.+++.+|+..+..|+|.|.|.+.
T Consensus 59 ~~~gv~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v~l~v~r~~~ 121 (126)
T 2yuy_A 59 PMDTIFVKQVKEGGPAFEAG-LCTGDRIIKVNGESVIGKTYSQVIALIQNSDTTLELSVMPKDS 121 (126)
T ss_dssp CCCCCCBCCCCSSSHHHHHT-CCSSCCCCEETTEECSSCCHHHHHHHHHTCTTEEEEECCCCCC
T ss_pred CCCCEEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCEEEEEEEECCC
Confidence 34679999997 7888888 9999999999999999999999999999999999999988754
No 244
>1uju_A Scribble; PDZ domain, cellular signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI, signaling protein; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.66 E-value=2e-08 Score=89.29 Aligned_cols=61 Identities=31% Similarity=0.451 Sum_probs=56.0
Q ss_pred CCCCcEEEecc--hhhhhcCCCCCCCEEEEECCEecCCCCHHHHHHHHHhCCCeEEEEEEeCC
Q psy2533 271 ADPERFYQNLS--VYRNQNGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGPIVTLEIAKQG 331 (684)
Q Consensus 271 ~d~GIFV~sI~--GaAardGrLr~GDqIL~VNG~sl~g~Th~eAv~lLk~sg~~VtL~V~R~~ 331 (684)
...|+||..|. ++|++.|+|++||+|++|||+++.++++.+++.+|+..+..|+|.|.|..
T Consensus 42 ~~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~l~~~g~~v~l~v~r~~ 104 (111)
T 1uju_A 42 TDEGIFISKVSPTGAAGRDGRLRVGLRLLEVNQQSLLGLTHGEAVQLLRSVGDTLTVLVCDGF 104 (111)
T ss_dssp TCCCCEEEEECTTSHHHHHSSCCTTCBCCBBSSCBCTTSCHHHHHHHHSSCSSEEEECCCCCC
T ss_pred CCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEECC
Confidence 35689999997 79999999999999999999999999999999999998899999998764
No 245
>1n7t_A 99-MER peptide of densin-180-like protein; PDZ domain, C-terminal peptide complex, high affnity ligand, signaling protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2h3l_A
Probab=98.66 E-value=6.6e-08 Score=84.64 Aligned_cols=59 Identities=24% Similarity=0.337 Sum_probs=53.2
Q ss_pred CCCCcEEEecc--hhhhhcCCCCCCCEEEEECCEecCCCCHHHHHHHHHhCCCeEEEEEEeCC
Q psy2533 271 ADPERFYQNLS--VYRNQNGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGPIVTLEIAKQG 331 (684)
Q Consensus 271 ~d~GIFV~sI~--GaAardGrLr~GDqIL~VNG~sl~g~Th~eAv~lLk~sg~~VtL~V~R~~ 331 (684)
...|+||..|. ++|++ +|++||+|++|||+.+.++++.+++.+++..+..|.|.|.|..
T Consensus 41 ~~~gv~V~~V~~~spA~~--gL~~GD~I~~vng~~v~~~~~~~~~~~~~~~g~~v~l~v~R~~ 101 (103)
T 1n7t_A 41 DDDGIFVTRVQPEGPASK--LLQPGDKIIQANGYSFINIEHGQAVSLLKTFQNTVELIIVREV 101 (103)
T ss_dssp SCCSEECCCBSSSSTTSS--SCCTTCEEEEETTEECSSCCHHHHHHHHHHCCSEEEEEEECCC
T ss_pred CCCCEEEEEECCCCchHH--CCCCCCEEEEECCEECCCCCHHHHHHHhhcCCCeEEEEEEecC
Confidence 35689999987 78887 6999999999999999999999999999999999999999864
No 246
>2d90_A PDZ domain containing protein 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=98.65 E-value=6.7e-08 Score=84.48 Aligned_cols=60 Identities=18% Similarity=0.333 Sum_probs=52.8
Q ss_pred CCcEEEecc--hhhhhcCCCCCCCEEEEECCEecCCCCHHHHHHHHHhCCCeEEEEEEeCCcc
Q psy2533 273 PERFYQNLS--VYRNQNGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGPIVTLEIAKQGAI 333 (684)
Q Consensus 273 ~GIFV~sI~--GaAardGrLr~GDqIL~VNG~sl~g~Th~eAv~lLk~sg~~VtL~V~R~~~~ 333 (684)
.|++|..|. ++|++.| |++||+|++|||..+.++++.+++.+|+..+..|.|.|.|++..
T Consensus 30 ~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v~l~v~r~~~~ 91 (102)
T 2d90_A 30 KGQIIKDIEPGSPAEAAG-LKNNDLVVAVNGKSVEALDHDGVVEMIRKGGDQTTLLVLDKEAE 91 (102)
T ss_dssp SSEEEECCCTTSTTTTTT-CCTTCEEEEESSCBCTTSCHHHHHHHHHHSTTEEEEEECSTTCC
T ss_pred CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCEEEEEEEECCCc
Confidence 467888887 6777777 99999999999999999999999999999899999999887543
No 247
>1ujv_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics, KIAA0705 protein; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.64 E-value=6.6e-08 Score=84.34 Aligned_cols=58 Identities=14% Similarity=0.236 Sum_probs=49.6
Q ss_pred CcEEEecchhhhhcCCCCCCCEEEEECCEecCCCCHHHHHHHHHhC--CCeEEEEEEeCCc
Q psy2533 274 ERFYQNLSVYRNQNGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRT--GPIVTLEIAKQGA 332 (684)
Q Consensus 274 GIFV~sI~GaAardGrLr~GDqIL~VNG~sl~g~Th~eAv~lLk~s--g~~VtL~V~R~~~ 332 (684)
|+||..+.-+| ..++|++||+|++|||+++.+++|.+++.+|+.. +..|.|.|.|.+.
T Consensus 33 Gv~V~~v~~~a-~~aGL~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~g~ 92 (96)
T 1ujv_A 33 GQRVKQILDIQ-GCPGLCEGDLIVEINQQNVQNLSHTEVVDILKDCPIGSETSLIIHRGSG 92 (96)
T ss_dssp EEEEEEESCGG-GSTTCCSSCEEEEETTEECSSCCHHHHHHHHHHSCTTSEEEEEEECCSS
T ss_pred CEEEEEEeccc-ccCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCCCEEEEEEEECCC
Confidence 57787777334 4677999999999999999999999999999984 6799999998754
No 248
>1qav_A Alpha-1 syntrophin (residues 77-171); beta-finger, heterodimer, membrane protein-oxidoreductase CO; 1.90A {Mus musculus} SCOP: b.36.1.1 PDB: 1z86_A 2pdz_A 2vrf_A
Probab=98.63 E-value=6.4e-08 Score=82.60 Aligned_cols=58 Identities=28% Similarity=0.389 Sum_probs=53.0
Q ss_pred CCcEEEecc--hhhhhcCCCCCCCEEEEECCEecCCCCHHHHHHHHHhCCCeEEEEEEeC
Q psy2533 273 PERFYQNLS--VYRNQNGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGPIVTLEIAKQ 330 (684)
Q Consensus 273 ~GIFV~sI~--GaAardGrLr~GDqIL~VNG~sl~g~Th~eAv~lLk~sg~~VtL~V~R~ 330 (684)
.++||..|. ++|++.|+|++||+|++|||+++.++++.+++.+++..+..|+|.|.|.
T Consensus 30 ~g~~V~~V~~~spA~~aggl~~GD~I~~ing~~v~~~~~~~~~~~~~~~~~~v~l~v~r~ 89 (90)
T 1qav_A 30 MPILISKIFKGLAADQTEALFVGDAILSVNGEDLSSATHDEAVQALKKTGKEVVLEVKYM 89 (90)
T ss_dssp EEEEEEEECTTSHHHHTTCCCTTEEEEEETTEECTTCCHHHHHHHHHTCCSEEEEEEEEC
T ss_pred CCEEEEEECCCCHHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEEEEEEEe
Confidence 468898887 7899987899999999999999999999999999999999999999874
No 249
>3hpk_A Protein interacting with PRKCA 1; oxidized, PDZ domain, kinase, protein binding; 2.20A {Rattus norvegicus} PDB: 3hpm_A
Probab=98.63 E-value=7.6e-08 Score=87.36 Aligned_cols=60 Identities=25% Similarity=0.341 Sum_probs=55.1
Q ss_pred CCcEEEecc--hhhhhcCCCCCCCEEEEECCEecCCCCHHHHHHHHHhCCCeEEEEEEeCCc
Q psy2533 273 PERFYQNLS--VYRNQNGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGPIVTLEIAKQGA 332 (684)
Q Consensus 273 ~GIFV~sI~--GaAardGrLr~GDqIL~VNG~sl~g~Th~eAv~lLk~sg~~VtL~V~R~~~ 332 (684)
.++||..|. ++|++.|+|++||+|++|||.++.+++|.+++.+|+..+..|+|.|.|...
T Consensus 45 ~~~~V~~v~~gspA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~~~~~v~l~v~r~~~ 106 (125)
T 3hpk_A 45 PCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNKLQA 106 (125)
T ss_dssp SSEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHSCSEEEEEEEEECS
T ss_pred CCEEEEEeCCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEECCC
Confidence 578999987 799999999999999999999999999999999999999999999998543
No 250
>2qkv_A Inactivation-NO-after-potential D protein; PDZ domain, scaffolding protein, membrane, sensory transduction, vision; 1.55A {Drosophila melanogaster} PDB: 2qkt_A 2qku_A
Probab=98.63 E-value=4.7e-08 Score=84.92 Aligned_cols=59 Identities=20% Similarity=0.326 Sum_probs=54.2
Q ss_pred CCcEEEecc--hhhhhcCCCCCCCEEEEECCEecCCCCHHHHHHHHHhCCCeEEEEEEeCC
Q psy2533 273 PERFYQNLS--VYRNQNGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGPIVTLEIAKQG 331 (684)
Q Consensus 273 ~GIFV~sI~--GaAardGrLr~GDqIL~VNG~sl~g~Th~eAv~lLk~sg~~VtL~V~R~~ 331 (684)
.|+||..|. ++|++.|+|++||+|++|||+++.++++.+++.+++..+..|+|.|.|+.
T Consensus 31 ~gv~V~~V~~~spA~~aG~L~~GD~I~~Ing~~v~~~~~~~~~~~~~~~~~~v~l~v~R~~ 91 (96)
T 2qkv_A 31 IGCTIADLIQGQYPEIDSKLQRGDIITKFNGDALEGLPFQVSYALFKGANGKVSMEVTRPK 91 (96)
T ss_dssp SSEEEEEECTTSCHHHHHHCCTTCEEEEETTEECTTCCHHHHHHHHHTCSSEEEEEEECCC
T ss_pred CcEEEEEeCCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHhcCCCcEEEEEEeCC
Confidence 468899987 78999888999999999999999999999999999999899999999864
No 251
>1wif_A RSGI RUH-020, riken cDNA 4930408O21; PDZ domain, structural genomics, mouse cDNA, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.62 E-value=1e-07 Score=88.15 Aligned_cols=57 Identities=21% Similarity=0.284 Sum_probs=51.2
Q ss_pred CcEEEecc--hhhhhcCCCCCCCEEEEECCEecCCCCHHHHHHHHHh--CCCeEEEEEEeC
Q psy2533 274 ERFYQNLS--VYRNQNGRLQAGDQLLKVDGQSLVGITQEKAAEYLVR--TGPIVTLEIAKQ 330 (684)
Q Consensus 274 GIFV~sI~--GaAardGrLr~GDqIL~VNG~sl~g~Th~eAv~lLk~--sg~~VtL~V~R~ 330 (684)
+++|..|. ++|++.|+|++||+|++|||..+.+.++.+++.+|+. .+..|+|.|.|.
T Consensus 50 ~v~V~~V~~gspA~~aG~L~~GD~Il~VnG~~v~~~s~~d~~~~l~~~~~G~~v~l~V~R~ 110 (126)
T 1wif_A 50 YLQISHLINKGAAASDGILQPGDVLISVGHANVLGYTLREFLKLLQNITIGTVLQIKAYRG 110 (126)
T ss_dssp EEEECCCCTTSSGGGCSSSCTTCBEEEESSSCCTTCCHHHHHHHHTSCCSSCEEEEEEESS
T ss_pred cEEEEEECCCCHHHHcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCCEEEEEEEEC
Confidence 56777776 7899999999999999999999999999999999987 478999999987
No 252
>1tp5_A Presynaptic density protein 95; PDZ-peptide ligand complex, peptide binding protein; 1.54A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1tp3_A 1tq3_A 1be9_A 1bfe_A
Probab=98.62 E-value=5.2e-08 Score=87.44 Aligned_cols=64 Identities=28% Similarity=0.335 Sum_probs=56.6
Q ss_pred CCcEEEecc--hhhhhcCCCCCCCEEEEECCEecCCCCHHHHHHHHHhCCCeEEEEEEeCCccccc
Q psy2533 273 PERFYQNLS--VYRNQNGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGPIVTLEIAKQGAIYHG 336 (684)
Q Consensus 273 ~GIFV~sI~--GaAardGrLr~GDqIL~VNG~sl~g~Th~eAv~lLk~sg~~VtL~V~R~~~~~~~ 336 (684)
.|+||..|. ++|++.|.|++||+|++|||..+.++++.+++.+++..+..|.|.|.|....+..
T Consensus 38 ~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~l~v~r~~~~~~~ 103 (119)
T 1tp5_A 38 EGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVTIIAQYKPEEYSR 103 (119)
T ss_dssp CCEEEEEECTTSHHHHHSCCCTTEEEEEETTEECTTCCHHHHHHHHHTSCSEEEEEEEECHHHHHT
T ss_pred CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEECCchhcc
Confidence 478888887 7888888899999999999999999999999999999999999999997655543
No 253
>4e34_A Golgi-associated PDZ and coiled-coil motif-contai protein; PDZ-peptide complex, protein transport-inhibitor complex; 1.40A {Homo sapiens} PDB: 4e35_A
Probab=98.61 E-value=7.5e-08 Score=81.53 Aligned_cols=57 Identities=19% Similarity=0.310 Sum_probs=51.4
Q ss_pred CCcEEEecc--hhhhhcCCCCCCCEEEEECCEecCCCCHHHHHHHHHhCCCeEEEEEEe
Q psy2533 273 PERFYQNLS--VYRNQNGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGPIVTLEIAK 329 (684)
Q Consensus 273 ~GIFV~sI~--GaAardGrLr~GDqIL~VNG~sl~g~Th~eAv~lLk~sg~~VtL~V~R 329 (684)
.++||..|. ++|+++++|++||+|++|||.++.++++.+++.+++..+..++|.|.+
T Consensus 28 ~~~~V~~V~~gspA~~~agl~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~l~v~~ 86 (87)
T 4e34_A 28 VPILISEIHPGQPADRCGGLHVGDAILAVNGVNLRDTKHKEAVTILSQQRGEIEFEVVY 86 (87)
T ss_dssp EEEEEEEECTTSHHHHHSCCCTTEEEEEETTEECTTCCHHHHHHHHHHCCSEEEEEEEE
T ss_pred CCEEEEEECCCCHHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEE
Confidence 358888887 788887789999999999999999999999999999999999998864
No 254
>2o2t_A Multiple PDZ domain protein; structural protein, structural genomics, structural genomics consortium, SGC; 2.70A {Homo sapiens}
Probab=98.61 E-value=6.1e-08 Score=86.78 Aligned_cols=62 Identities=31% Similarity=0.446 Sum_probs=56.4
Q ss_pred CCCcEEEecc--hhhhhcCCCCCCCEEEEECCEecC-CCCHHHHHHHHHhCCCeEEEEEEeCCcc
Q psy2533 272 DPERFYQNLS--VYRNQNGRLQAGDQLLKVDGQSLV-GITQEKAAEYLVRTGPIVTLEIAKQGAI 333 (684)
Q Consensus 272 d~GIFV~sI~--GaAardGrLr~GDqIL~VNG~sl~-g~Th~eAv~lLk~sg~~VtL~V~R~~~~ 333 (684)
..|+||..|. ++|++.|+|++||+|++|||+++. ++++.+++.+|+..+..|.|.|.|.+..
T Consensus 48 ~~gv~V~~V~~~spA~~aG~l~~GD~Il~ing~~v~~~~~~~~~~~~l~~~~~~v~l~v~R~~~~ 112 (117)
T 2o2t_A 48 ELGIFVQEIQEGSVAHRDGRLKETDQILAINGQALDQTITHQQAISILQKAKDTVQLVIARGSLP 112 (117)
T ss_dssp CEEEEECCCCTTSHHHHHCCCCTTCEEEEETTEECCTTSCHHHHHHHHHHCCSEEEEEEESSCCG
T ss_pred CCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCCHHHHHHHHHcCCCEEEEEEEeCCcc
Confidence 3578999987 799999999999999999999998 9999999999999999999999997653
No 255
>2jre_A C60-1 PDZ domain peptide; de novo protein; NMR {Synthetic}
Probab=98.61 E-value=8.7e-08 Score=84.45 Aligned_cols=61 Identities=23% Similarity=0.384 Sum_probs=55.8
Q ss_pred CCCcEEEecc--hhhhhcCCCCCCCEEEEECCEecCCCCHHHHHHHHHhCCCeEEEEEEeCCc
Q psy2533 272 DPERFYQNLS--VYRNQNGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGPIVTLEIAKQGA 332 (684)
Q Consensus 272 d~GIFV~sI~--GaAardGrLr~GDqIL~VNG~sl~g~Th~eAv~lLk~sg~~VtL~V~R~~~ 332 (684)
..|+||..|. ++|++.|.|++||+|++|||+.+.++++.+++.+|+..+..|.|.|.|.+.
T Consensus 43 ~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~g~~v~l~v~R~~~ 105 (108)
T 2jre_A 43 ATGIYVKSLIPGSAAALDGRIEPNDKILRVDDVNVQGMAQSDVVEVLRNAGNPVRLLLIRRLP 105 (108)
T ss_dssp CCCCEEEEECTTSHHHHHSSCCSSEEEEEETTEECTTSCHHHHHHHHHHHCSEEEEEEEECCC
T ss_pred CCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEeCCc
Confidence 4589999997 789998889999999999999999999999999999888999999998764
No 256
>2yt7_A Amyloid beta A4 precursor protein-binding family A member 3; neuron-specific X11L2 protein, neuronal MUNC18-1-interacting protein 3, MINT-3; NMR {Homo sapiens}
Probab=98.60 E-value=7.9e-08 Score=84.26 Aligned_cols=59 Identities=29% Similarity=0.394 Sum_probs=53.4
Q ss_pred CCcEEEecc--hhhhhcCCCCCCCEEEEECCEecCCCCHHHHHHHHHh--CCCeEEEEEEeCC
Q psy2533 273 PERFYQNLS--VYRNQNGRLQAGDQLLKVDGQSLVGITQEKAAEYLVR--TGPIVTLEIAKQG 331 (684)
Q Consensus 273 ~GIFV~sI~--GaAardGrLr~GDqIL~VNG~sl~g~Th~eAv~lLk~--sg~~VtL~V~R~~ 331 (684)
+++||..|. ++|+++|+|++||+|++|||+.+.+.++.+++.+|+. .+..|+|.|.|..
T Consensus 37 ~~~~V~~V~~~spA~~~ggl~~GD~I~~Ing~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~~ 99 (101)
T 2yt7_A 37 PTAVIANLLHGGPAERSGALSIGDRLTAINGTSLVGLPLAACQAAVRETKSQTSVTLSIVHCP 99 (101)
T ss_dssp CCEEEEEECTTSTTGGGSSCCTTCEEEEESSCBCTTSCHHHHHHHHHHTTTSSEEEEEECCCC
T ss_pred cCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCeEEEEEEeCC
Confidence 468999997 7899989999999999999999999999999999998 6789999998753
No 257
>2kpk_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; PDZ domain, ATP-binding, cell junction, cell membrane; NMR {Homo sapiens} PDB: 2kpl_A
Probab=98.59 E-value=1.2e-07 Score=86.91 Aligned_cols=60 Identities=18% Similarity=0.304 Sum_probs=54.5
Q ss_pred CCcEEEecc--hhhhhcCCCCCCCEEEEECCEecCCCCHHHHHHHHHhC--CCeEEEEEEeCCc
Q psy2533 273 PERFYQNLS--VYRNQNGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRT--GPIVTLEIAKQGA 332 (684)
Q Consensus 273 ~GIFV~sI~--GaAardGrLr~GDqIL~VNG~sl~g~Th~eAv~lLk~s--g~~VtL~V~R~~~ 332 (684)
.++||..|. ++|++.|+|++||+|++|||+.+.+++|.+++.+|+.. +..|+|.|.|...
T Consensus 43 ~~v~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~~~ 106 (129)
T 2kpk_A 43 EFLQIKSLVLDGPAALDGKMETGDVIVSVNDTCVLGHTHAQVVKIFQSIPIGASVDLELCRGYP 106 (129)
T ss_dssp EEEEEEEECTTSHHHHHSSCCTTCEEEEETTEECTTSCHHHHHHHHHHSCTTEEEEEEEEECSC
T ss_pred CCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCeEEEEEEeCCC
Confidence 368898887 79999999999999999999999999999999999997 6789999999764
No 258
>2kom_A Partitioning defective 3 homolog; PAR-3B, PDZ domain, PSI, structural genomics, alternative splicing, cell cycle, cell division, cell junction; NMR {Homo sapiens}
Probab=98.59 E-value=1.9e-07 Score=84.69 Aligned_cols=59 Identities=36% Similarity=0.502 Sum_probs=53.5
Q ss_pred CCcEEEecc--hhhhhcCCCCCCCEEEEECCEecCCCCHHHHHHHHHhC--CCeEEEEEEeCC
Q psy2533 273 PERFYQNLS--VYRNQNGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRT--GPIVTLEIAKQG 331 (684)
Q Consensus 273 ~GIFV~sI~--GaAardGrLr~GDqIL~VNG~sl~g~Th~eAv~lLk~s--g~~VtL~V~R~~ 331 (684)
.+++|..|. ++|++.|+|++||+|++|||+++.++++.+++.+|+.. +..|.|.|.|.+
T Consensus 58 ~gv~V~~V~~gspA~~aG~L~~GD~Il~Ing~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~g 120 (121)
T 2kom_A 58 APIYVKNILPRGAAIQDGRLKAGDRLIEVNGVDLVGKSQEEVVSLLRSTKMEGTVSLLVFRQE 120 (121)
T ss_dssp CCEEEEEECTTSHHHHHTCCCSSSEEEEETTEECTTSCHHHHHHHHHHCCSSCEEEEEEEECC
T ss_pred CCEEEEEECCCChHHHcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCCEEEEEEEeCC
Confidence 578999997 78888888999999999999999999999999999985 689999999865
No 259
>2dls_A PDZ-rhogef, RHO guanine nucleotide exchange factor 11; PDZ domain, arhgef11, KIAA0380, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2omj_A 2os6_A
Probab=98.58 E-value=1.3e-07 Score=81.43 Aligned_cols=57 Identities=18% Similarity=0.343 Sum_probs=49.9
Q ss_pred CcEEEecc--hhhhhcCCCCCCCEEEEECCEecCCCCHHHHHHHHHhCCCeEEEEEEeCCc
Q psy2533 274 ERFYQNLS--VYRNQNGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGPIVTLEIAKQGA 332 (684)
Q Consensus 274 GIFV~sI~--GaAardGrLr~GDqIL~VNG~sl~g~Th~eAv~lLk~sg~~VtL~V~R~~~ 332 (684)
|+||..|. ++|++.| |++||+|++|||+.+.++++.+++.+++ .+..|+|.|.|...
T Consensus 30 g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~~~-~g~~v~l~v~R~~~ 88 (93)
T 2dls_A 30 IVLVQSVRPGGAAMKAG-VKEGDRIIKVNGTMVTNSSHLEVVKLIK-SGAYVALTLLGSSS 88 (93)
T ss_dssp SCEEEEECSSSTTTTTT-CCSSCEEEEETTEECSSSCHHHHHHHHT-SSSEEEEEEECCCC
T ss_pred CEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHhhc-CCCEEEEEEEECCC
Confidence 57787776 6788877 9999999999999999999999888887 58999999998754
No 260
>1ihj_A INAD; intermolecular disulfide bond, PDZ domain, signaling protein; 1.80A {Drosophila melanogaster} SCOP: b.36.1.1
Probab=98.58 E-value=1e-07 Score=82.43 Aligned_cols=60 Identities=20% Similarity=0.354 Sum_probs=54.5
Q ss_pred CCCcEEEecc--hhhhhcCCCCCCCEEEEECCEecCCCCHHHHHHHHHhCCCeEEEEEEeCC
Q psy2533 272 DPERFYQNLS--VYRNQNGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGPIVTLEIAKQG 331 (684)
Q Consensus 272 d~GIFV~sI~--GaAardGrLr~GDqIL~VNG~sl~g~Th~eAv~lLk~sg~~VtL~V~R~~ 331 (684)
..|+||..|. ++|++.|.|++||+|++|||+.+.++++.++..+|+..+..|+|.|.|.+
T Consensus 36 ~~g~~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v~l~v~R~g 97 (98)
T 1ihj_A 36 TTGIFIKGIVPDSPAHLCGRLKVGDRILSLNGKDVRNSTEQAVIDLIKEADFKIELEIQTFD 97 (98)
T ss_dssp EEEEEEEEECTTSHHHHHCSCCTTCEEEEETTEECTTCCHHHHHHHHHHSCSEEEEEEEEC-
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHhcCCCeEEEEEEeCC
Confidence 4578999987 78998888999999999999999999999999999998999999999864
No 261
>1wi2_A Riken cDNA 2700099C19; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.57 E-value=2e-07 Score=82.01 Aligned_cols=57 Identities=25% Similarity=0.326 Sum_probs=51.5
Q ss_pred CCcEEEecc--hhhhhcCCCCCCCEEEEECCEecCCCCHHHHHHHHHhCCCeEEEEEEeCC
Q psy2533 273 PERFYQNLS--VYRNQNGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGPIVTLEIAKQG 331 (684)
Q Consensus 273 ~GIFV~sI~--GaAardGrLr~GDqIL~VNG~sl~g~Th~eAv~lLk~sg~~VtL~V~R~~ 331 (684)
.|+||..|. ++|++.| |++||+|++|||+.+.++++.+++.+|+. +..++|.|.|..
T Consensus 41 ~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l~~-~~~v~l~v~r~~ 99 (104)
T 1wi2_A 41 LGIFISKVIPDSDAHRAG-LQEGDQVLAVNDVDFQDIEHSKAVEILKT-AREISMRVRFFS 99 (104)
T ss_dssp CCCEEEEECTTSHHHHHT-CCTTCEEEEETTEECSSCCHHHHHHHHHH-SSSEEEEEECCC
T ss_pred CCEEEEEeCCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHhC-CCEEEEEEEECC
Confidence 478999987 7888877 99999999999999999999999999998 788999998864
No 262
>1nf3_C PAR-6B; semi-CRIB motif, switch I and II, PDZ domain, GTPase binding domain, signaling protein; HET: GNP; 2.10A {Mus musculus} SCOP: b.36.1.1 PDB: 2lc6_A 1ry4_A 1x8s_A 2lc7_A 1rzx_A
Probab=98.57 E-value=1.1e-07 Score=87.11 Aligned_cols=60 Identities=17% Similarity=0.364 Sum_probs=55.3
Q ss_pred CCcEEEecc--hhhhhcCCCCCCCEEEEECCEecCCCCHHHHHHHHHhCCCeEEEEEEeCCc
Q psy2533 273 PERFYQNLS--VYRNQNGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGPIVTLEIAKQGA 332 (684)
Q Consensus 273 ~GIFV~sI~--GaAardGrLr~GDqIL~VNG~sl~g~Th~eAv~lLk~sg~~VtL~V~R~~~ 332 (684)
.|+||..|. |+|++.|.|++||+|++|||.++.++++.+++.+|+..+..|+|.|.|.+.
T Consensus 65 ~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~l~~~~~~v~l~v~r~~~ 126 (128)
T 1nf3_C 65 PGIFISRLVPGGLAQSTGLLAVNDEVLEVNGIEVSGKSLDQVTDMMIANSRNLIITVRPANQ 126 (128)
T ss_dssp EEEEEEEECTTCHHHHHTCCCTTCEEEEETTEESTTCCHHHHHHHHHHTTTSEEEEEECCCC
T ss_pred CCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEECCc
Confidence 579999997 789999889999999999999999999999999999999999999998653
No 263
>3bpu_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; structural genomi consortium, SGC, ATP-binding, cell junction; 1.60A {Homo sapiens}
Probab=98.55 E-value=1.7e-07 Score=79.66 Aligned_cols=57 Identities=23% Similarity=0.382 Sum_probs=47.0
Q ss_pred CCcEEEecc-hhhhhcCCCCCCCEEEEECCEecCCCCHHHHHHHHHh--CCCeEEEEEEeCC
Q psy2533 273 PERFYQNLS-VYRNQNGRLQAGDQLLKVDGQSLVGITQEKAAEYLVR--TGPIVTLEIAKQG 331 (684)
Q Consensus 273 ~GIFV~sI~-GaAardGrLr~GDqIL~VNG~sl~g~Th~eAv~lLk~--sg~~VtL~V~R~~ 331 (684)
.+++|..+. ++|+ ++|++||+|++|||..+.++++.+++.+|+. .+..|.|.|.|.+
T Consensus 27 ~~~~v~~v~~spA~--aGl~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~g 86 (88)
T 3bpu_A 27 GGQRVKQIVDSPRS--RGLKEGDLIVEVNKKNVQALTHNQVVDMLVESPKGSEVTLLVQRQT 86 (88)
T ss_dssp SSEEEEECCC--CC--TTCCTTCEEEEETTEECTTSCHHHHHHHHHTSCTTCEEEEEEEEEC
T ss_pred CcEEEEEecCChhH--hCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCCCCCEEEEEEEeCC
Confidence 356776665 5666 5799999999999999999999999999985 5789999998865
No 264
>1whd_A RGS3, regulator of G-protein signaling 3; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, signaling protein; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.55 E-value=2.1e-07 Score=81.39 Aligned_cols=56 Identities=14% Similarity=0.079 Sum_probs=48.5
Q ss_pred cEEEecc--hhhhhcCCCCCCCEEEEECCEecCCCCHHHHHHHHHhCCCeEEEEEEeCC
Q psy2533 275 RFYQNLS--VYRNQNGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGPIVTLEIAKQG 331 (684)
Q Consensus 275 IFV~sI~--GaAardGrLr~GDqIL~VNG~sl~g~Th~eAv~lLk~sg~~VtL~V~R~~ 331 (684)
++|..|. ++|++.| |++||+|++|||+.+.++++.+++.+|+..+..|.|.|.|..
T Consensus 38 ~~V~~V~~~spA~~aG-L~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~~v~l~v~R~~ 95 (100)
T 1whd_A 38 VRVQAVDSGGPAERAG-LQQLDTVLQLNERPVEHWKCVELAHEIRSCPSEIILLVWRVS 95 (100)
T ss_dssp CBCCBCCTTSHHHHHT-CCSSCEEEEETTEECTTCCHHHHHHHHHHCSSEEEEEEEECC
T ss_pred EEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEECC
Confidence 4555555 6778776 999999999999999999999999999998888999998864
No 265
>2qbw_A PDZ-fibronectin fusion protein; fibronectin PDZ, unknown function; 1.80A {Homo sapiens} PDB: 3ch8_A
Probab=98.54 E-value=1.9e-07 Score=89.95 Aligned_cols=57 Identities=25% Similarity=0.358 Sum_probs=52.9
Q ss_pred CCCCcEEEecc--hhhhhcCCCCCCCEEEEECCEecCCCCHHHHHHHHHhCCCeEEEEEEe
Q psy2533 271 ADPERFYQNLS--VYRNQNGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGPIVTLEIAK 329 (684)
Q Consensus 271 ~d~GIFV~sI~--GaAardGrLr~GDqIL~VNG~sl~g~Th~eAv~lLk~sg~~VtL~V~R 329 (684)
.+.|+||..|. ++|++ +|++||+|++|||+++.+++|.+++.+++..+..|.|.|.|
T Consensus 22 ~~~g~~V~~v~~~spA~~--gl~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~l~v~r 80 (195)
T 2qbw_A 22 DDDGIFVTRVQPEGPASK--LLQPGDKIIQANGYSFINIEHGQAVSLLKTFQNTVELIIVR 80 (195)
T ss_dssp TCCSEEEEEECTTSTTTT--TCCTTCEEEEETTEECTTCCHHHHHHHHHHCCSEEEEEEEE
T ss_pred CCCCEEEEEECCCChHHh--CCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEE
Confidence 35689999997 78888 59999999999999999999999999999999999999999
No 266
>2fcf_A Multiple PDZ domain protein; adaptor molecule, protein linker, structural genomics, struc genomics consortium, SGC, structural protein; 1.76A {Homo sapiens} SCOP: b.36.1.1
Probab=98.54 E-value=1.8e-07 Score=81.63 Aligned_cols=61 Identities=25% Similarity=0.378 Sum_probs=53.6
Q ss_pred CCCcEEEecc--hhhhhcCCCCCCCEEEEECCEecCCCCHHHHHHHHHhCCCeEEEEEEeCCc
Q psy2533 272 DPERFYQNLS--VYRNQNGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGPIVTLEIAKQGA 332 (684)
Q Consensus 272 d~GIFV~sI~--GaAardGrLr~GDqIL~VNG~sl~g~Th~eAv~lLk~sg~~VtL~V~R~~~ 332 (684)
..|+||..|. ++|++.|.|++||+|++|||.++.++++.++..+|+..+..|.|.|.|...
T Consensus 38 ~~g~~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v~l~v~r~~~ 100 (103)
T 2fcf_A 38 MRGIFIKHVLEDSPAGKNGTLKPGDRIVEVDGMDLRDASHEQAVEAIRKAGNPVVFMVQSIIS 100 (103)
T ss_dssp ---EEEEEECSSSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTCCSSEEEEEECCCC
T ss_pred CCCEEEEEeCCCCcHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCcEEEEEEECCC
Confidence 4689999997 789988889999999999999999999999999999988899999998653
No 267
>3l4f_D SH3 and multiple ankyrin repeat domains protein 1; coiled-coil, PDZ, guanine-nucleotide releasing factor, phosphoprotein, SH3 domain; 2.80A {Rattus norvegicus}
Probab=98.54 E-value=1.6e-07 Score=86.74 Aligned_cols=59 Identities=17% Similarity=0.366 Sum_probs=54.4
Q ss_pred CCCcEEEecc--hhhhhcCCCCCCCEEEEECCEecCCCCHHHHHHHHHhCCCeEEEEEEeCC
Q psy2533 272 DPERFYQNLS--VYRNQNGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGPIVTLEIAKQG 331 (684)
Q Consensus 272 d~GIFV~sI~--GaAardGrLr~GDqIL~VNG~sl~g~Th~eAv~lLk~sg~~VtL~V~R~~ 331 (684)
..|+||..|. ++|++.| |++||+|++|||+++.++++.+++.+|+..+..|.|.|.+..
T Consensus 64 ~~gv~V~~V~~gspA~~aG-L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~g~~v~l~v~~~~ 124 (132)
T 3l4f_D 64 PALQYLESVDEGGVAWRAG-LRMGDFLIEVNGQNVVKVGHRQVVNMIRQGGNTLMVKVVMVT 124 (132)
T ss_dssp CCSEEEEEECTTSGGGGGT-CCTTCEEEEESSSBCTTSCHHHHHHHHHHTTTEEEEEEECCC
T ss_pred CCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCEEEEEEEECC
Confidence 4589999998 7888888 999999999999999999999999999999999999998764
No 268
>1v6b_A Harmonin isoform A1; structural genomics, usher syndrome, USH1, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.54 E-value=1.2e-07 Score=85.71 Aligned_cols=58 Identities=17% Similarity=0.284 Sum_probs=52.5
Q ss_pred CcEEEecc--hhhhhcCCCCCCCEEEEECCEecCCCCHHHHHHHHHhC----CCeEEEEEEeCC
Q psy2533 274 ERFYQNLS--VYRNQNGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRT----GPIVTLEIAKQG 331 (684)
Q Consensus 274 GIFV~sI~--GaAardGrLr~GDqIL~VNG~sl~g~Th~eAv~lLk~s----g~~VtL~V~R~~ 331 (684)
.+||..|. ++|++.|+|++||+|++|||+++.+++|.+++.+|+.. +..|+|.|.|..
T Consensus 44 ~i~I~~V~~gspA~~aggL~~GD~Il~Ing~~v~~~~~~~~~~~l~~~~~~~g~~v~l~v~r~~ 107 (118)
T 1v6b_A 44 KVVVSAVYEGGAAERHGGVVKGDEIMAINGKIVTDYTLAEAEAALQKAWNQGGDWIDLVVAVCP 107 (118)
T ss_dssp SEEEEECCTTSHHHHHCSSCTTCEEEEESSCBCTTCBHHHHHHHHHHHHHHTCSEEEEEEECCC
T ss_pred CEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHHhhhcCCCeEEEEEEeCC
Confidence 37888887 79999988999999999999999999999999999875 789999999854
No 269
>4fln_A Protease DO-like 2, chloroplastic; protease, DEG, PDZ, hydrolase; 2.80A {Arabidopsis thaliana}
Probab=98.53 E-value=7.1e-07 Score=100.51 Aligned_cols=174 Identities=14% Similarity=0.085 Sum_probs=98.9
Q ss_pred ccEEEEEecCCChhcccCccccCCeeeecCCeecCCCCH--------HHHHHHH--HcCCCEEEEEEEecCccccccccc
Q psy2533 119 LGIYIKSVVKGGAADANGRLQAGDQLLKVDGQSLVGITQ--------EKAAEYL--VRTGPIVTLEIAKQGAIYHGLATL 188 (684)
Q Consensus 119 ~gIfIs~V~pGGpA~r~GrLqvGDrILaVNG~sl~g~sh--------~eAV~lL--k~sg~~V~LvV~R~~~~~~~~stl 188 (684)
.|++|..|.|+|||++ + |++||.|++|||..+..... .....++ +..|+.|.|+|.|.+.......++
T Consensus 277 ~Gv~V~~V~~~spA~~-a-l~~GDvI~~idg~~V~~~g~~~~~~~~~~~l~~~v~~~~~Gd~v~l~v~R~Gk~~~v~Vtl 354 (539)
T 4fln_A 277 EGVLVRRVEPTSDASK-V-LKEGDVIVSFDDLHVGCEGTVPFRSSERIAFRYLISQKFAGDIAEIGIIRAGEHKKVQVVL 354 (539)
T ss_dssp BCEEEEEECTTSGGGG-T-CCTTCEEEEETTEECBSSSEEECSTTCEEETHHHHHTSCTTCEEEEEEEETTEEEEEEEEC
T ss_pred CceeeecccCCChHHh-C-ccCCCEEEEECCEEeCcCCeeccccchhHHHHHHHHcCCCCCEEEEEEEECCEEEEEEEEE
Confidence 4899999999999986 5 99999999999999965432 1112233 356999999999998765554444
Q ss_pred cCCCCCccccCCCccccccccccccccccccccccCCCCCCCCCCCCC--------CCCCCcccccccccccCCCCCCCC
Q psy2533 189 LSQPSPVMTRGQVKTYESTISVQQRKERSSQNLHDMNNGVGGSHHPAP--------GPGSGMNHHPVVSRQASTPSLPQA 260 (684)
Q Consensus 189 ~s~psP~~~s~~~~~ses~ls~~~~~~~~sv~L~k~s~GlGfSi~~~~--------g~G~Gi~ikpIv~~~~~t~slp~~ 260 (684)
...+.-........ .+ ....-.|+.+.+.. ....+... ......
T Consensus 355 ~~~~~~~~~~~~~~-----------~p-------~~~~~~Gl~f~~Lt~~~~~~~~~~~~~~~l--~~~~~~-------- 406 (539)
T 4fln_A 355 RPRVHLVPYHIDGG-----------QP-------SYIIVAGLVFTPLSEPLIEEECEDTIGLKL--LTKARY-------- 406 (539)
T ss_dssp BCCCCSSCSCTTSS-----------CC-------CCCCSTTEEEEECCHHHHTTSCSSSSCHHH--HHHHHH--------
T ss_pred ccCccccccccccC-----------CC-------ccccccceEEeeCCHHHHHhhcccccCcee--eehhhh--------
Confidence 33221111000000 00 00000121111100 00000000 000000
Q ss_pred CCCCCCCCCCCCCCcEEEecc-hhhhhcCCCCCCCEEEEECCEecCCCCHHHHHHHHHhCCCe-EEEEEE
Q psy2533 261 SPYPAPAPAPADPERFYQNLS-VYRNQNGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGPI-VTLEIA 328 (684)
Q Consensus 261 sl~~gs~~~~~d~GIFV~sI~-GaAardGrLr~GDqIL~VNG~sl~g~Th~eAv~lLk~sg~~-VtL~V~ 328 (684)
.........|+.|..|. +.++...++++||+|++|||+.+.++ .+..++|+.+.+. +.|.+.
T Consensus 407 ----~~~~~~~~~gVvvs~V~~~s~a~~~g~~~gdiI~~vNg~~V~s~--~~l~~~l~~~k~~~l~~~~~ 470 (539)
T 4fln_A 407 ----SVARFRGEQIVILSQVLANEVNIGYEDMNNQQVLKFNGIPIRNI--HHLAHLIDMCKDKYLVFEFE 470 (539)
T ss_dssp ----CCCSSTTCCCEEEEEECCCGGGTTCSSCCSEEEEEETTEECCSH--HHHHHHHHTCCSSEEEEEET
T ss_pred ----hhhccCCceEEEEEEecCCchhhhcCCCCCCEEEeECCEEcCCH--HHHHHHHHHcCCCeEEEEEC
Confidence 00011234688888887 44444455999999999999999865 5778889887654 555553
No 270
>1uit_A Human discs large 5 protein; PDZ domain, HDLG5, maguk family, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.53 E-value=1.4e-07 Score=84.44 Aligned_cols=62 Identities=21% Similarity=0.291 Sum_probs=54.7
Q ss_pred CCcEEEecc--hhhhhcCCCCCCCEEEEECCEecCCCCHHHHHHHHHhCCCeEEEEEEeCCcccc
Q psy2533 273 PERFYQNLS--VYRNQNGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGPIVTLEIAKQGAIYH 335 (684)
Q Consensus 273 ~GIFV~sI~--GaAardGrLr~GDqIL~VNG~sl~g~Th~eAv~lLk~sg~~VtL~V~R~~~~~~ 335 (684)
.|+||..|. ++|++.| |++||+|++|||+.+.++++.+++.+++..+..|.|.|.|.+..+.
T Consensus 42 ~gv~V~~V~~~spA~~aG-L~~GD~Il~vng~~v~~~~~~~~~~~~~~~g~~v~l~v~r~~~~~~ 105 (117)
T 1uit_A 42 GGIYVSKVTVGSIAHQAG-LEYGDQLLEFNGINLRSATEQQARLIIGQQCDTITILAQYNPHVHQ 105 (117)
T ss_dssp SCEEEEEECTTSHHHHHT-CCTTCEECEETTEETTTCCHHHHHHHTTSCCSEEEEEECCCSCCCC
T ss_pred CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEECCchhh
Confidence 478999987 7888887 9999999999999999999999998788888999999999876554
No 271
>2edv_A FERM and PDZ domain-containing protein 1; cytoskeletal-associated protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.53 E-value=1.5e-07 Score=81.75 Aligned_cols=56 Identities=16% Similarity=0.287 Sum_probs=48.9
Q ss_pred CcEEEecc--hhhhhcCCCCCCCEEEEECCEecCCCCHHHHHHHHHhCCCeEEEEEEeCC
Q psy2533 274 ERFYQNLS--VYRNQNGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGPIVTLEIAKQG 331 (684)
Q Consensus 274 GIFV~sI~--GaAardGrLr~GDqIL~VNG~sl~g~Th~eAv~lLk~sg~~VtL~V~R~~ 331 (684)
++||..|. ++| . ++|++||+|++|||+.+.++++.+++.+++..+..|.|.|.|..
T Consensus 32 ~~~V~~V~~~spA-~-agL~~GD~Il~ing~~v~~~~~~~~~~~~~~~g~~v~l~v~R~~ 89 (96)
T 2edv_A 32 PLTVVAVTAGGSA-H-GKLFPGDQILQMNNEPAEDLSWERAVDILREAEDSLSITVVRCT 89 (96)
T ss_dssp SCBCCCBCSSSSS-T-TTSCTTCBEEEESSCBSTTCCHHHHHHHHHHCSSCEEEEEEECC
T ss_pred CeEEEEECCCCch-h-hCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEECC
Confidence 45666665 556 3 88999999999999999999999999999998999999999976
No 272
>2iwn_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP- 1, HOST-virus interaction, structural genomics consortium, synaptosome, tight junction; 1.35A {Homo sapiens}
Probab=98.52 E-value=2.1e-07 Score=79.68 Aligned_cols=60 Identities=35% Similarity=0.613 Sum_probs=54.3
Q ss_pred CCCcEEEecc--hhhhhcCCCCCCCEEEEECCEecCCCCHHHHHHHHHhCCCeEEEEEEeCC
Q psy2533 272 DPERFYQNLS--VYRNQNGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGPIVTLEIAKQG 331 (684)
Q Consensus 272 d~GIFV~sI~--GaAardGrLr~GDqIL~VNG~sl~g~Th~eAv~lLk~sg~~VtL~V~R~~ 331 (684)
..|++|..|. ++|++.|.|++||+|++|||..+.++++.+++.+++..+..|.|.|.|.+
T Consensus 32 ~~~~~V~~v~~~s~A~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~l~v~r~g 93 (97)
T 2iwn_A 32 PSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRG 93 (97)
T ss_dssp CCCCEEEEECTTCHHHHHCCCCTTCEEEEETTEECTTSCHHHHHHHHHTCCSEEEEEEEEEE
T ss_pred CCCEEEEEeCCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEeCC
Confidence 4578999987 78888888999999999999999999999999999988899999998864
No 273
>2iwq_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP- 1, membrane, HOST- interaction, structural genomics consortium, synaptosome, T junction; 1.80A {Homo sapiens}
Probab=98.52 E-value=2.6e-07 Score=84.33 Aligned_cols=61 Identities=25% Similarity=0.378 Sum_probs=55.8
Q ss_pred CCCcEEEecc--hhhhhcCCCCCCCEEEEECCEecCCCCHHHHHHHHHhCCCeEEEEEEeCCc
Q psy2533 272 DPERFYQNLS--VYRNQNGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGPIVTLEIAKQGA 332 (684)
Q Consensus 272 d~GIFV~sI~--GaAardGrLr~GDqIL~VNG~sl~g~Th~eAv~lLk~sg~~VtL~V~R~~~ 332 (684)
..|+||..|. ++|++.|.|++||+|++|||+++.++++.+++.+|+..+..|+|.|.|...
T Consensus 58 ~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~v~l~v~r~~~ 120 (123)
T 2iwq_A 58 MRGIFIKHVLEDSPAGKNGTLKPGDRIVEVDGMDLRDASHEQAVEAIRKAGNPVVFMVQSIIS 120 (123)
T ss_dssp CCSEEEEEECSSSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHCCSSEEEEEECCCC
T ss_pred CCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEECCc
Confidence 4689999997 789998889999999999999999999999999999988899999988653
No 274
>1m5z_A GRIP, AMPA receptor interacting protein; six beta-strands and two alpha-helices, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1
Probab=98.51 E-value=2.9e-07 Score=78.52 Aligned_cols=57 Identities=18% Similarity=0.233 Sum_probs=51.8
Q ss_pred CCcEEEecc--hhhhhcCCCCCCCEEEEECCEecCCCCHHHHHHHHHhCCCeEEEEEEeC
Q psy2533 273 PERFYQNLS--VYRNQNGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGPIVTLEIAKQ 330 (684)
Q Consensus 273 ~GIFV~sI~--GaAardGrLr~GDqIL~VNG~sl~g~Th~eAv~lLk~sg~~VtL~V~R~ 330 (684)
.|+||..|. ++|++.| |++||+|++|||+.+.++++.+++.+++..+..|.|.|.|.
T Consensus 32 ~gv~V~~V~~~spA~~aG-l~~GD~I~~vng~~v~~~~~~~~~~~~~~~g~~v~l~v~R~ 90 (91)
T 1m5z_A 32 KGVYVKNIRPAGPGDLGG-LKPYDRLLQVNHVRTRDFDCCLVVPLIAESGNKLDLVISRN 90 (91)
T ss_dssp SCEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHTSTTEEEEEEEEC
T ss_pred CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCEEEEEEEeC
Confidence 478999987 7888877 99999999999999999999999999998899999999875
No 275
>2ejy_A 55 kDa erythrocyte membrane protein; GPC, maguk, PDZ, membrane protein; NMR {Homo sapiens} PDB: 2ev8_A
Probab=98.51 E-value=1.6e-07 Score=82.82 Aligned_cols=58 Identities=14% Similarity=0.324 Sum_probs=52.9
Q ss_pred CCcEEEecc--hhhhhcCCCCCCCEEEEECCEecCCCCHHHHHHHHHhCCCeEEEEEEeC
Q psy2533 273 PERFYQNLS--VYRNQNGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGPIVTLEIAKQ 330 (684)
Q Consensus 273 ~GIFV~sI~--GaAardGrLr~GDqIL~VNG~sl~g~Th~eAv~lLk~sg~~VtL~V~R~ 330 (684)
.|++|..|. ++|++.|+|++||+|++|||.++.+++++++..+|+..+..|+|.|.+.
T Consensus 36 ~gv~V~~V~~gspA~~aG~L~~GD~Il~ING~~v~~~~~~~~~~~l~~~~~~v~L~V~~~ 95 (97)
T 2ejy_A 36 QSCTVARILHGGMIHRQGSLHVGDEILEINGTNVTNHSVDQLQKAMKETKGMISLKVIPN 95 (97)
T ss_dssp CCEEEEEECSSSHHHHHTCCCTTCEEEEETTBCCCSSCSHHHHHHHHHCCEEEEEEEECC
T ss_pred CCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEEC
Confidence 478898887 8999999999999999999999999999999999999888999999754
No 276
>2q3g_A PDZ and LIM domain protein 7; structural genomics, structural genomics consortium, SGC; 1.11A {Homo sapiens}
Probab=98.51 E-value=1.9e-07 Score=79.51 Aligned_cols=59 Identities=20% Similarity=0.274 Sum_probs=52.4
Q ss_pred CCcEEEecc--hhhhhcCCCCCCCEEEEECCEecCCCCHHHHHHHHHhCCCeEEEEEEeCCc
Q psy2533 273 PERFYQNLS--VYRNQNGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGPIVTLEIAKQGA 332 (684)
Q Consensus 273 ~GIFV~sI~--GaAardGrLr~GDqIL~VNG~sl~g~Th~eAv~lLk~sg~~VtL~V~R~~~ 332 (684)
.+++|..|. ++|++.| |++||+|++|||+++.++++.+++.+++..+..+.|.|.|.+.
T Consensus 27 ~~v~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~~~~~g~~v~l~v~R~~~ 87 (89)
T 2q3g_A 27 VPLSISRLTPGGKAAQAG-VAVGDWVLSIDGENAGSLTHIEAQNKIRACGERLSLGLSRAIT 87 (89)
T ss_dssp EEEEEEEECTTSHHHHTT-CCTTCEEEEETTEEGGGCCHHHHHHHHHTCTTEEEEEEEEECC
T ss_pred CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCEEEEEEEeCCC
Confidence 367888887 6788777 9999999999999999999999999999889999999998754
No 277
>2dmz_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.51 E-value=1.7e-07 Score=85.45 Aligned_cols=62 Identities=21% Similarity=0.425 Sum_probs=56.7
Q ss_pred CCCcEEEecc--hhhhhcCCCCCCCEEEEECCEecCCCCHHHHHHHHHhCCCeEEEEEEeCCcc
Q psy2533 272 DPERFYQNLS--VYRNQNGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGPIVTLEIAKQGAI 333 (684)
Q Consensus 272 d~GIFV~sI~--GaAardGrLr~GDqIL~VNG~sl~g~Th~eAv~lLk~sg~~VtL~V~R~~~~ 333 (684)
..|+||..|. ++|++.|.|++||+|++|||+++.++++.+++.+|+..+..|.|.|.|.+..
T Consensus 45 ~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~~v~l~v~R~~~~ 108 (129)
T 2dmz_A 45 ASGIYVKSVIPGSAAYHNGHIQVNDKIVAVDGVNIQGFANHDVVEVLRNAGQVVHLTLVRRKTS 108 (129)
T ss_dssp CCEEEEEEECTTSHHHHHTCCCSSCBEEEETTBCCTTCCHHHHHHHHHHCCSSEEEEEEEESSS
T ss_pred CCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEeCCcc
Confidence 4689999997 7899998899999999999999999999999999999888999999997653
No 278
>2uzc_A Human pdlim5, PDZ and LIM domain 5; metal-binding, enigma homolog, phosphorylation, signaling PR LIM domain, PDZ domain; 1.5A {Homo sapiens}
Probab=98.50 E-value=2.8e-07 Score=78.15 Aligned_cols=58 Identities=17% Similarity=0.245 Sum_probs=52.0
Q ss_pred CCcEEEecc--hhhhhcCCCCCCCEEEEECCEecCCCCHHHHHHHHHhCCCeEEEEEEeCC
Q psy2533 273 PERFYQNLS--VYRNQNGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGPIVTLEIAKQG 331 (684)
Q Consensus 273 ~GIFV~sI~--GaAardGrLr~GDqIL~VNG~sl~g~Th~eAv~lLk~sg~~VtL~V~R~~ 331 (684)
.+++|..|. ++|++.| |++||+|++|||..+.++++.++..+++..+..|.|.|.|.+
T Consensus 27 ~~~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~~~~~g~~v~l~v~R~g 86 (88)
T 2uzc_A 27 MPLTISSLKDGGKAAQAN-VRIGDVVLSIDGINAQGMTHLEAQNKIKGCTGSLNMTLQRES 86 (88)
T ss_dssp EEEEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHHHTCCSEEEEEEECCC
T ss_pred CCeEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEEEEEEeCC
Confidence 357888887 6888877 999999999999999999999999999988899999998875
No 279
>3nfk_A Tyrosine-protein phosphatase non-receptor type 4; PDZ-PDZ-binding site complex, protein binding; 1.43A {Homo sapiens} SCOP: b.36.1.1 PDB: 3nfl_A 2vph_A
Probab=98.49 E-value=1.9e-07 Score=82.15 Aligned_cols=57 Identities=14% Similarity=0.238 Sum_probs=51.2
Q ss_pred CCcEEEecc--hhhhhcC-CCCCCCEEEEECCEecCCCCHHHHHHHHHhCCC----eEEEEEEe
Q psy2533 273 PERFYQNLS--VYRNQNG-RLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGP----IVTLEIAK 329 (684)
Q Consensus 273 ~GIFV~sI~--GaAardG-rLr~GDqIL~VNG~sl~g~Th~eAv~lLk~sg~----~VtL~V~R 329 (684)
.++||..|. ++|++.| +|++||+|++|||+++.++++.+++.+|+..+. .|.|.|.|
T Consensus 43 ~~~~V~~V~~~spA~~aG~rL~~GD~Il~ing~~v~~~~~~~~~~~i~~~~~~~~~~v~l~v~r 106 (107)
T 3nfk_A 43 MPVIVSRVAPGTPADLCVPRLNEGDQVVLINGRDIAEHTHDQVVLFIKASCERHSGELMLLVRP 106 (107)
T ss_dssp EEEEEEEECTTSHHHHSSSCCCTTCEEEEETTEECTTCCHHHHHHHHHCGGGSBTTBEEEEEEC
T ss_pred CCeEEEEECCCCchHHcCCccCCCCEEEEECCEECCCCCHHHHHHHHHhccccCCcEEEEEEEc
Confidence 367888887 7899988 599999999999999999999999999999875 89999976
No 280
>3ngh_A PDZ domain-containing protein 1; adaptor protein, SR-BI, signaling protein; 1.80A {Mus musculus} SCOP: b.36.1.0
Probab=98.48 E-value=3.7e-07 Score=80.15 Aligned_cols=59 Identities=19% Similarity=0.322 Sum_probs=53.3
Q ss_pred CCcEEEecc--hhhhhcCCCCCCCEEEEECCEecCCCCHHHHHHHHHhCCCeEEEEEEeCCc
Q psy2533 273 PERFYQNLS--VYRNQNGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGPIVTLEIAKQGA 332 (684)
Q Consensus 273 ~GIFV~sI~--GaAardGrLr~GDqIL~VNG~sl~g~Th~eAv~lLk~sg~~VtL~V~R~~~ 332 (684)
.|+||..|. ++|++.| |++||+|++|||..+.+++|.+++.+|+..+..|+|.|.|.+.
T Consensus 26 ~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v~l~v~r~~~ 86 (106)
T 3ngh_A 26 DGHLIRVIEEGSPAEKAG-LLDGDRVLRINGVFVDKEEHAQVVELVRKSGNSVTLLVLDGDS 86 (106)
T ss_dssp CSCEEECCCTTSHHHHTT-CCTTCEEEEETTEECTTSCHHHHHHHHHHTTTEEEEEEECHHH
T ss_pred CCEEEEEeCCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCEEEEEEEECCe
Confidence 478888887 6788877 9999999999999999999999999999999999999998654
No 281
>1rgw_A ZAsp protein; PDZ, cypher, oracle, muscle, Z-DISK, sarcomere, structural protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 1wjl_A
Probab=98.48 E-value=2.6e-07 Score=77.72 Aligned_cols=58 Identities=17% Similarity=0.214 Sum_probs=50.7
Q ss_pred CCcEEEecc--hhhhhcCCCCCCCEEEEECCEecCCCCHHHHHHHHHhCCCeEEEEEEeCC
Q psy2533 273 PERFYQNLS--VYRNQNGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGPIVTLEIAKQG 331 (684)
Q Consensus 273 ~GIFV~sI~--GaAardGrLr~GDqIL~VNG~sl~g~Th~eAv~lLk~sg~~VtL~V~R~~ 331 (684)
.+++|..|. ++|++. +|++||+|++|||..+.++++.+++.+++..+..|.|.|.|.+
T Consensus 25 ~~v~V~~V~~~spA~~a-Gl~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~l~v~R~~ 84 (85)
T 1rgw_A 25 MPLTISRITPGSKAAQS-QLSQGDLVVAIDGVNTDTMTHLEAQNKIKSASYNLSLTLQKSK 84 (85)
T ss_dssp SCCBEEEECTTSHHHHS-SCCCCSBEEEETTEECTTCCHHHHHHHHTTCSSCEEEEEESCC
T ss_pred CCeEEEEECCCCHHHHc-CCCCCCEEEEECCEECCCcCHHHHHHHHHcCCCeEEEEEEeCC
Confidence 367888887 677775 5999999999999999999999999999988888999998864
No 282
>2cs5_A Tyrosine-protein phosphatase, non-receptor type 4; PDZ domain, ptpase, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.47 E-value=1.5e-07 Score=84.61 Aligned_cols=59 Identities=14% Similarity=0.240 Sum_probs=52.5
Q ss_pred CCcEEEecc--hhhhhc-CCCCCCCEEEEECCEecCCCCHHHHHHHHHhCC----CeEEEEEEeCC
Q psy2533 273 PERFYQNLS--VYRNQN-GRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTG----PIVTLEIAKQG 331 (684)
Q Consensus 273 ~GIFV~sI~--GaAard-GrLr~GDqIL~VNG~sl~g~Th~eAv~lLk~sg----~~VtL~V~R~~ 331 (684)
.++||..|. ++|++. |+|++||+|++|||+.+.+++|.+++.+|+..+ ..|.|.|.|..
T Consensus 41 ~~v~V~~V~~~spA~~a~gGL~~GD~Il~ing~~v~~~~~~~~~~~~~~~~~~~~~~v~l~v~R~~ 106 (119)
T 2cs5_A 41 MPVIVSRVAPGTPADLCVPRLNEGDQVVLINGRDIAEHTHDQVVLFIKASCERHSGELMLLVRPNA 106 (119)
T ss_dssp EEEEEEEECSSSTTTSSSSCCCTTCEEEEETTBCTTSSCHHHHHHHHHHHHHCCSSCEEEEEECCC
T ss_pred CCeEEEEECCCCHHHHhhcCCCCCCEEEEECCEECCCCCHHHHHHHHHhccccCCCEEEEEEEccc
Confidence 368898887 788888 689999999999999999999999999999875 48999998874
No 283
>2rcz_A Tight junction protein ZO-1; PDZ, domain-swapping, cell junction, membrane, phosphorylati domain, protein binding; 1.70A {Homo sapiens} PDB: 2jwe_A 2osg_A
Probab=98.47 E-value=3.4e-07 Score=75.73 Aligned_cols=58 Identities=19% Similarity=0.398 Sum_probs=51.1
Q ss_pred CCcEEEecc--hhhhhcCCCCCCCEEEEECCEecCCCCHHHHHHHHHhCCCeEEEEEEeC
Q psy2533 273 PERFYQNLS--VYRNQNGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGPIVTLEIAKQ 330 (684)
Q Consensus 273 ~GIFV~sI~--GaAardGrLr~GDqIL~VNG~sl~g~Th~eAv~lLk~sg~~VtL~V~R~ 330 (684)
.|++|..+. ++|++.|.|++||+|++|||..+.++++.++..+|+..+..+.|.|.|.
T Consensus 21 ~gv~V~~v~~~s~A~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v~l~v~R~ 80 (81)
T 2rcz_A 21 SHIFVKEISQDSLAARDGNIQEGDVVLKINGTVTENMSLTDAKTLIERSKGKLKMVVQRD 80 (81)
T ss_dssp EEEEEEEECTTSHHHHHSSCCTTCEEEEETTEECTTCCHHHHHHHHHTSTTEEEEEEEC-
T ss_pred CCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHCCCCeEEEEEEeC
Confidence 367888887 7888887799999999999999999999999999998878999999875
No 284
>2e7k_A Maguk P55 subfamily member 2; PDZ domain, MPP2 protein, discs large homolog 2, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.46 E-value=2.8e-07 Score=79.45 Aligned_cols=57 Identities=26% Similarity=0.307 Sum_probs=52.2
Q ss_pred CCcEEEecc--hhhhhcCCCCCCCEEEEECCEecCCCCHHHHHHHHHhCCCeEEEEEEeC
Q psy2533 273 PERFYQNLS--VYRNQNGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGPIVTLEIAKQ 330 (684)
Q Consensus 273 ~GIFV~sI~--GaAardGrLr~GDqIL~VNG~sl~g~Th~eAv~lLk~sg~~VtL~V~R~ 330 (684)
.+++|..|. ++|++.|+|++||+|++|||..+ +.+++++..+|+..+..|+|.|.|.
T Consensus 29 ~~v~V~~V~~~spA~~ag~L~~GD~I~~ing~~v-~~~~~~~~~~l~~~~~~v~l~v~~~ 87 (91)
T 2e7k_A 29 GELVIARILHGGMVAQQGLLHVGDIIKEVNGQPV-GSDPRALQELLRNASGSVILKILSG 87 (91)
T ss_dssp SSEEEEEECSSSHHHHHCCCCTTCEEEEETTEEC-TTCHHHHHHHHHTCCSSBCEEEECC
T ss_pred CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEEC-CCCHHHHHHHHHcCCCeEEEEEEEC
Confidence 468888887 79999999999999999999999 9999999999999888999999875
No 285
>3khf_A Microtubule-associated serine/threonine-protein kinase 3; MAST3, microtubule associated serine/threonine kinase 3, PDZ domain, structural genomics; 1.20A {Homo sapiens} PDB: 2w7r_A 2kqf_A 2kyl_A 3ps4_A
Probab=98.46 E-value=3.8e-07 Score=79.06 Aligned_cols=58 Identities=21% Similarity=0.436 Sum_probs=53.0
Q ss_pred CcEEEecc--hhhhhcCCCCCCCEEEEECCEecCCCCHHHHHHHHHhCCCeEEEEEEeCCc
Q psy2533 274 ERFYQNLS--VYRNQNGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGPIVTLEIAKQGA 332 (684)
Q Consensus 274 GIFV~sI~--GaAardGrLr~GDqIL~VNG~sl~g~Th~eAv~lLk~sg~~VtL~V~R~~~ 332 (684)
|++|..|. ++|++.| |++||+|++|||..+.++++.+++.+|+..+..|.|.|.|.+.
T Consensus 35 g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v~l~v~r~~~ 94 (99)
T 3khf_A 35 HHVVWSVEDGSPAQEAG-LRAGDLITHINGESVLGLVHMDVVELLLKSGNKISLRTTALEN 94 (99)
T ss_dssp EEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHHSCSEEEEEEECSCS
T ss_pred CeEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHhcCCCEEEEEEEECCC
Confidence 67888887 7888887 9999999999999999999999999999999999999998764
No 286
>1x6d_A Interleukin-16; PDZ domain, lymphocyte chemoattractant factor (LCF), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.2
Probab=98.46 E-value=2.4e-07 Score=83.26 Aligned_cols=61 Identities=20% Similarity=0.298 Sum_probs=52.8
Q ss_pred CCCcEEEecc--hhhhhcCCCCCCCEEEEECCEecCCCCHHHHHHHHHhCCCe-EEEEEEeCCc
Q psy2533 272 DPERFYQNLS--VYRNQNGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGPI-VTLEIAKQGA 332 (684)
Q Consensus 272 d~GIFV~sI~--GaAardGrLr~GDqIL~VNG~sl~g~Th~eAv~lLk~sg~~-VtL~V~R~~~ 332 (684)
..|+||..|. ++|++.|+|++||+|++|||+.+.++++.+++.+|+..+.. +.|+|.|.+.
T Consensus 41 ~~gv~V~~V~~~spA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~~~~~~~~l~v~R~~~ 104 (119)
T 1x6d_A 41 NKVITVHRVFPNGLASQEGTIQKGNEVLSINGKSLKGTTHHDALAILRQAREPRQAVIVTRKLT 104 (119)
T ss_dssp CSSCEEEEECSSSHHHHHTSSCTTCBCCEETTEECSSCCHHHHHHHHHHTTSSSEEEEEEECCC
T ss_pred CCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCeEEEEEEcCCC
Confidence 3578999997 89999999999999999999999999999999999887765 5577777654
No 287
>2pa1_A PDZ and LIM domain protein 2; PDZ domain, structural genomics, structural genomics consort metal binding protein; 1.70A {Homo sapiens} PDB: 3pdv_A
Probab=98.45 E-value=4.2e-07 Score=76.99 Aligned_cols=59 Identities=14% Similarity=0.285 Sum_probs=52.1
Q ss_pred CCcEEEecc--hhhhhcCCCCCCCEEEEECCEecCCCCHHHHHHHHHhCCCeEEEEEEeCCc
Q psy2533 273 PERFYQNLS--VYRNQNGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGPIVTLEIAKQGA 332 (684)
Q Consensus 273 ~GIFV~sI~--GaAardGrLr~GDqIL~VNG~sl~g~Th~eAv~lLk~sg~~VtL~V~R~~~ 332 (684)
.|++|..|. ++|++.| |++||+|++|||+.+.++++.++..+|+..+..|.|.|.|.+.
T Consensus 26 ~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v~l~v~R~~~ 86 (87)
T 2pa1_A 26 TPIMVTKVAERGKAKDAD-LRPGDIIVAINGESAEGMLHAEAQSKIRQSPSPLRLQLDRITS 86 (87)
T ss_dssp EEEEEEEECSSSHHHHTT-CCTTCEEEEETTEESTTCCHHHHHHHHHTCCSSEEEEEEECCC
T ss_pred CCEEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEecCC
Confidence 367888887 6777765 9999999999999999999999999999988899999999763
No 288
>1q3o_A Shank1; PDZ, GKAP, peptide binding protein; 1.80A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1q3p_A 3qjm_A 3qjn_A 3o5n_A*
Probab=98.45 E-value=4.6e-07 Score=80.17 Aligned_cols=59 Identities=17% Similarity=0.366 Sum_probs=53.3
Q ss_pred CCCcEEEecc--hhhhhcCCCCCCCEEEEECCEecCCCCHHHHHHHHHhCCCeEEEEEEeCC
Q psy2533 272 DPERFYQNLS--VYRNQNGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGPIVTLEIAKQG 331 (684)
Q Consensus 272 d~GIFV~sI~--GaAardGrLr~GDqIL~VNG~sl~g~Th~eAv~lLk~sg~~VtL~V~R~~ 331 (684)
..|+||..|. ++|++.| |++||+|++|||+.+.+++|.+++.+|+..+..|.|.|.|..
T Consensus 44 ~~gv~V~~V~~~spA~~aG-l~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~~v~l~v~~~~ 104 (109)
T 1q3o_A 44 PALQYLESVDEGGVAWRAG-LRMGDFLIEVNGQNVVKVGHRQVVNMIRQGGNTLMVKVVMVT 104 (109)
T ss_dssp CSSEEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHHHHTTTEEEEEEEEEE
T ss_pred CCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCEEEEEEEECC
Confidence 4589999997 7888877 999999999999999999999999999988899999998754
No 289
>3cyy_A Tight junction protein ZO-1; protein-ligand complex, cell junction, membrane, phosphoprot domain, tight junction, transmembrane; 2.40A {Homo sapiens}
Probab=98.44 E-value=4.1e-07 Score=77.45 Aligned_cols=61 Identities=18% Similarity=0.367 Sum_probs=51.5
Q ss_pred CCcEEEecc--hhhhhcCCCCCCCEEEEECCEecCCCCHHHHHHHHHhCCCeEEEEEEeCCcc
Q psy2533 273 PERFYQNLS--VYRNQNGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGPIVTLEIAKQGAI 333 (684)
Q Consensus 273 ~GIFV~sI~--GaAardGrLr~GDqIL~VNG~sl~g~Th~eAv~lLk~sg~~VtL~V~R~~~~ 333 (684)
.|++|..|. ++|++.|+|++||+|++|||..+.++++.++..+|+..+..+.|.|.|.+..
T Consensus 23 ~gv~V~~v~~~s~A~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v~l~v~r~g~~ 85 (92)
T 3cyy_A 23 SHIFVKEISQDSLAARDGNIQEGDVVLKINGTVTENMSLTDAKTLIERSKGKLKMVVQRDERA 85 (92)
T ss_dssp EEEEEEEECTTCHHHHSCCCCTTCEEEEETTEECTTCCHHHHHHHHHTTTTEEEEEEEC----
T ss_pred CCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCcEEEEEEeCCce
Confidence 367888887 6888877799999999999999999999999999998888999999987643
No 290
>2edp_A Fragment, shroom family member 4; APX/shroom family member, KIAA1202 protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.44 E-value=2.3e-07 Score=81.11 Aligned_cols=59 Identities=15% Similarity=0.264 Sum_probs=52.2
Q ss_pred CcEEEecc--hhhhhcCCCCCCCEEEEECCEecCCCCHHHHHHHHHhCCCeEEEEEEeCCcc
Q psy2533 274 ERFYQNLS--VYRNQNGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGPIVTLEIAKQGAI 333 (684)
Q Consensus 274 GIFV~sI~--GaAardGrLr~GDqIL~VNG~sl~g~Th~eAv~lLk~sg~~VtL~V~R~~~~ 333 (684)
+++|..|. ++|++.|+|++||+|++|||+.+.++ +.+++.+++..+..|+|.|.|.+..
T Consensus 36 ~v~V~~V~~~spA~~agGL~~GD~I~~ing~~v~~~-~~~~~~~~~~~~~~v~l~v~R~~~~ 96 (100)
T 2edp_A 36 PLTVSKIEDGGKAALSQKMRTGDELVNINGTPLYGS-RQEALILIKGSFRILKLIVRRRNSG 96 (100)
T ss_dssp EEEECCCCTTSHHHHHTSCCTTCEEEEETTEECCSC-SHHHHHHHHTCCSSCEEEEEECCCS
T ss_pred CeEEEEECCCCHHHHcCCCCCCCEEEEECCEEccch-HHHHHHHHHhCCCeEEEEEEeCCCC
Confidence 56777776 78999978999999999999999997 8899999998888999999998653
No 291
>2w4f_A Protein LAP4; structural protein, phosphoprotein, UBL conjugation, leucine-rich repeat, alternative splicing, cytoplasm, circletail, coiled coil; 1.30A {Homo sapiens}
Probab=98.44 E-value=5.8e-07 Score=77.37 Aligned_cols=60 Identities=28% Similarity=0.453 Sum_probs=54.2
Q ss_pred CCCcEEEecc--hhhhhcCCCCCCCEEEEECCEecCCCCHHHHHHHHHhCCCeEEEEEEeCCc
Q psy2533 272 DPERFYQNLS--VYRNQNGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGPIVTLEIAKQGA 332 (684)
Q Consensus 272 d~GIFV~sI~--GaAardGrLr~GDqIL~VNG~sl~g~Th~eAv~lLk~sg~~VtL~V~R~~~ 332 (684)
..|++|..|. ++|++.| |++||+|++|||+.+.++++.+++..++..+..|.|.|.|.+.
T Consensus 33 ~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~~~~~g~~v~l~v~R~g~ 94 (97)
T 2w4f_A 33 DEGIFISRVSEEGPAARAG-VRVGDKLLEVNGVALQGAEHHEAVEALRGAGTAVQMRVWRERE 94 (97)
T ss_dssp BCSEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHTSCSEEEEEEECCSS
T ss_pred CCCEEEEEECCCChHHHcC-CCCCCEEEEECCEECCCcCHHHHHHHHhCCCCeEEEEEEeCCc
Confidence 4689999997 7888887 9999999999999999999999999998889999999999764
No 292
>2gzv_A PRKCA-binding protein; protein kinase C, PDZ domain, structural genomics, structura genomics consortium, SGC, signaling protein; 1.12A {Homo sapiens} PDB: 2pku_A
Probab=98.43 E-value=6.1e-07 Score=80.75 Aligned_cols=58 Identities=24% Similarity=0.344 Sum_probs=52.1
Q ss_pred CCcEEEecc--hhhhhcCCCCCCCEEEEECCEecCCCCHHHHHHHHHhCCCeEEEEEEeC
Q psy2533 273 PERFYQNLS--VYRNQNGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGPIVTLEIAKQ 330 (684)
Q Consensus 273 ~GIFV~sI~--GaAardGrLr~GDqIL~VNG~sl~g~Th~eAv~lLk~sg~~VtL~V~R~ 330 (684)
.+++|..|. ++|++.|.|++||+|++|||..+.+.++.++..+|+..+..|+|.|.+.
T Consensus 50 ~~~~V~~V~~gspA~~aG~L~~GD~I~~Ing~~v~~~~~~~~~~~l~~~~~~v~l~v~~~ 109 (114)
T 2gzv_A 50 PCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNKL 109 (114)
T ss_dssp CCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHCCSEEEEEEECC
T ss_pred CCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEec
Confidence 468888887 7888888899999999999999999999999999998888899998654
No 293
>1uew_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.43 E-value=3.2e-07 Score=81.96 Aligned_cols=60 Identities=23% Similarity=0.397 Sum_probs=53.9
Q ss_pred CcEEEecc--hhhhhcCCCCCCCEEEEECCEecCCCCHHHHHHHHHhCCCeEEEEEEeCCcc
Q psy2533 274 ERFYQNLS--VYRNQNGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGPIVTLEIAKQGAI 333 (684)
Q Consensus 274 GIFV~sI~--GaAardGrLr~GDqIL~VNG~sl~g~Th~eAv~lLk~sg~~VtL~V~R~~~~ 333 (684)
++||..|. ++|+++++|++||+|++|||+.+.++++.+++.+|+..+..|.|.|.|.+..
T Consensus 44 ~~~V~~V~~~spA~~~agL~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v~l~v~r~~~~ 105 (114)
T 1uew_A 44 PHKIGRIIDGSPADRCAKLKVGDRILAVNGQSIINMPHADIVKLIKDAGLSVTLRIIPQEEL 105 (114)
T ss_dssp SCEEEEECTTCTTGGGSSCCTTCBEEEETTBCTTTSCHHHHHHHHHHTTTEEEEEECCCSCC
T ss_pred CeEEEEECCCChHHHhCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEeCCcC
Confidence 56888887 7888868899999999999999999999999999999889999999987643
No 294
>2pkt_A PDZ and LIM domain protein 1; PDZ domain, structural genomics, structural genomics consort unknown function; HET: PG4; 1.50A {Homo sapiens} PDB: 2v1w_A*
Probab=98.42 E-value=5.1e-07 Score=77.12 Aligned_cols=59 Identities=17% Similarity=0.200 Sum_probs=52.8
Q ss_pred CCcEEEecc--hhhhhcCCCCCCCEEEEECCEecCCCCHHHHHHHHHhCCCeEEEEEEeCCc
Q psy2533 273 PERFYQNLS--VYRNQNGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGPIVTLEIAKQGA 332 (684)
Q Consensus 273 ~GIFV~sI~--GaAardGrLr~GDqIL~VNG~sl~g~Th~eAv~lLk~sg~~VtL~V~R~~~ 332 (684)
.|++|..|. ++|++.| |++||+|++|||..+.++++.++..+|+..+..|.|.|.|.+.
T Consensus 27 ~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v~l~v~R~g~ 87 (91)
T 2pkt_A 27 QPLAISRVTPGSKAALAN-LCIGDVITAIDGENTSNMTHLEAQNRIKGCTDNLTLTVARSEH 87 (91)
T ss_dssp EEEEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHHHTCSSEEEEEEEEECC
T ss_pred CCeEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEECCc
Confidence 367888887 6787777 9999999999999999999999999999988899999999764
No 295
>2ego_A General receptor for phosphoinositides 1- associated scaffold protein; PDZ domain, ligand-free, protein binding; 1.80A {Rattus norvegicus} PDB: 2egn_A 2egk_A 2pnt_A
Probab=98.41 E-value=5.1e-07 Score=78.10 Aligned_cols=58 Identities=21% Similarity=0.374 Sum_probs=52.2
Q ss_pred CCCcEEEecc--hhhhhcCCCCCCCEEEEECCEecCCCCHHHHHHHHHhCCCeEEEEEEeC
Q psy2533 272 DPERFYQNLS--VYRNQNGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGPIVTLEIAKQ 330 (684)
Q Consensus 272 d~GIFV~sI~--GaAardGrLr~GDqIL~VNG~sl~g~Th~eAv~lLk~sg~~VtL~V~R~ 330 (684)
..+++|..|. ++|++.| |++||+|++|||+.+.++++.++..+|+..+..|+|.|.+.
T Consensus 36 ~~~~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v~l~v~~~ 95 (96)
T 2ego_A 36 EMVTFVARVHESSPAQLAG-LTPGDTIASVNGLNVEGIRHREIVDIIKASGNVLRLETLYG 95 (96)
T ss_dssp CEEEEEEEECTTCHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHHHHTTTEEEEEEECC
T ss_pred CCCeEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEEEEEEEC
Confidence 3578999987 7888887 99999999999999999999999999999888999999764
No 296
>2jxo_A Ezrin-radixin-moesin-binding phosphoprotein 50; nherf-1, PDZ domain, PDZ2, acetylation, cell projection, membrane, polymorphism; NMR {Homo sapiens}
Probab=98.41 E-value=3.2e-07 Score=79.42 Aligned_cols=58 Identities=19% Similarity=0.384 Sum_probs=49.6
Q ss_pred CCcEEEecc--hhhhhcCCCCCCCEEEEECCEecCCCCHHHHHHHHHhCCC-eEEEEEEeCC
Q psy2533 273 PERFYQNLS--VYRNQNGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGP-IVTLEIAKQG 331 (684)
Q Consensus 273 ~GIFV~sI~--GaAardGrLr~GDqIL~VNG~sl~g~Th~eAv~lLk~sg~-~VtL~V~R~~ 331 (684)
.|++|..|. ++|++.| |++||+|++|||+.+.++++.++..+|+..+. .+.|.|.|.+
T Consensus 33 ~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~~~~l~v~R~g 93 (98)
T 2jxo_A 33 PGQFIRSVDPDSPAEASG-LRAQDRIVEVNGVCMEGKQHGDVVSAIRAGGDETKLLVVDRET 93 (98)
T ss_dssp SCEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHTTTTEEEEEECCHHH
T ss_pred CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCcEEEEEEECCc
Confidence 378888887 7888887 99999999999999999999999999998755 4568877654
No 297
>1vae_A Rhophilin 2, rhophilin, RHO GTPase binding protein 2; PDZ domain, intracellular signaling cascade, signal transduction; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.41 E-value=5.2e-07 Score=81.12 Aligned_cols=59 Identities=15% Similarity=0.147 Sum_probs=47.8
Q ss_pred cEEEecc--hhhhhcCCCCCCCEEEEECCEecCCCCHHHHHHHHHhCCC-eEEEEEEeCCccc
Q psy2533 275 RFYQNLS--VYRNQNGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGP-IVTLEIAKQGAIY 334 (684)
Q Consensus 275 IFV~sI~--GaAardGrLr~GDqIL~VNG~sl~g~Th~eAv~lLk~sg~-~VtL~V~R~~~~~ 334 (684)
++|..|. ++|++.| |++||+|++|||+.+.++++.+++.+|+..+. .|.|.|.|.....
T Consensus 38 v~V~~V~~~spA~~aG-L~~GD~Il~InG~~v~~~~~~d~~~~i~~~~~~~v~l~V~~~~~~~ 99 (111)
T 1vae_A 38 VQVHFLDPHCSASLAG-AKEGDYIVSIQGVDCKWLTVSEVMKLLKSFGGEEVEMKVVSLLDST 99 (111)
T ss_dssp CEECCCCTTSSHHHHH-CCTTCEEEEETTEECSSCCHHHHHHHHHHTTTSEECEEEECEECCC
T ss_pred EEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCceEEEEEEecCCCc
Confidence 4555554 5677766 99999999999999999999999999998765 5999998764333
No 298
>3sfj_A TAX1-binding protein 3; PDZ:peptide complex, signaling protein-inhibitor complex; 1.24A {Homo sapiens} PDB: 3dj3_A
Probab=98.41 E-value=7.1e-07 Score=77.91 Aligned_cols=59 Identities=25% Similarity=0.447 Sum_probs=52.4
Q ss_pred CCCCcEEEecc--hhhhhcCCCCCCCEEEEECCEecCCCCHHHHHHHHHh-CCCeEEEEEEeC
Q psy2533 271 ADPERFYQNLS--VYRNQNGRLQAGDQLLKVDGQSLVGITQEKAAEYLVR-TGPIVTLEIAKQ 330 (684)
Q Consensus 271 ~d~GIFV~sI~--GaAardGrLr~GDqIL~VNG~sl~g~Th~eAv~lLk~-sg~~VtL~V~R~ 330 (684)
...|+||..|. ++|++.| |++||+|++|||..+.++++++++.+|+. .+..|.|.|.|+
T Consensus 43 ~~~gv~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~g~~v~l~v~R~ 104 (104)
T 3sfj_A 43 TDKGIYVTRVSEGGPAEIAG-LQIGDKIMQVNGWDMTMVTHDQARKRLTKRSEEVVRLLVTRQ 104 (104)
T ss_dssp TCCSEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHTCTTCSEEEEEEEEC
T ss_pred CCCCEEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCEEEEEEEcC
Confidence 35689999997 7888888 99999999999999999999999999976 457899999874
No 299
>1x5q_A LAP4 protein; PDZ domain, scribble homolog protein, hscrib, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.40 E-value=8.3e-07 Score=78.51 Aligned_cols=62 Identities=27% Similarity=0.433 Sum_probs=55.4
Q ss_pred CCCCcEEEecc--hhhhhcCCCCCCCEEEEECCEecCCCCHHHHHHHHHhCCCeEEEEEEeCCcc
Q psy2533 271 ADPERFYQNLS--VYRNQNGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGPIVTLEIAKQGAI 333 (684)
Q Consensus 271 ~d~GIFV~sI~--GaAardGrLr~GDqIL~VNG~sl~g~Th~eAv~lLk~sg~~VtL~V~R~~~~ 333 (684)
...|++|..|. ++|++.| |++||+|++|||+.+.++++.+++.+++..+..|.|.|.|.+..
T Consensus 44 ~~~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~~~~~g~~v~l~v~R~g~~ 107 (110)
T 1x5q_A 44 DDEGIFISRVSEEGPAARAG-VRVGDKLLEVNGVALQGAEHHEAVEALRGAGTAVQMRVWRESGP 107 (110)
T ss_dssp TCCSEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHSCCSEEEEEEEECSSC
T ss_pred CCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCcCHHHHHHHhhCCCCeEEEEEEECCcc
Confidence 34689999997 7888887 99999999999999999999999999988899999999997643
No 300
>2vsv_A Rhophilin-2; scaffold protein, RHO GTPase binding, protein-binding, RHOB, nitration, cytoplasm, PDZ domain, CAsp8; 1.82A {Homo sapiens}
Probab=98.40 E-value=5.9e-07 Score=80.83 Aligned_cols=57 Identities=12% Similarity=0.106 Sum_probs=48.2
Q ss_pred CcEEEecc--hhhhhcCCCCCCCEEEEECCEecCCCCHHHHHHHHHhCCCe-EEEEEEeCC
Q psy2533 274 ERFYQNLS--VYRNQNGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGPI-VTLEIAKQG 331 (684)
Q Consensus 274 GIFV~sI~--GaAardGrLr~GDqIL~VNG~sl~g~Th~eAv~lLk~sg~~-VtL~V~R~~ 331 (684)
+++|..|. ++|++.| |++||+|++|||.++.++++.++..+|+..++. |.|.|.|..
T Consensus 45 ~v~V~~V~~gspA~~AG-L~~GD~Il~VnG~~v~~~~~~dv~~~i~~~~~~~v~l~V~~~~ 104 (109)
T 2vsv_A 45 PVQVHFLDPYCSASVAG-AREGDYIVSIQLVDCKWLTLSEVMKLLKSFGEDEIEMKVVSLL 104 (109)
T ss_dssp SCEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHHHTTTTSCEEEEEESCC
T ss_pred CeEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCeEEEEEEECC
Confidence 35666665 6777765 999999999999999999999999999987775 999998764
No 301
>2eeg_A PDZ and LIM domain protein 4; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.39 E-value=8.1e-07 Score=76.55 Aligned_cols=59 Identities=15% Similarity=0.141 Sum_probs=51.4
Q ss_pred CCcEEEecc--hhhhhcCCCCCCCEEEEECCEecCCCCHHHHHHHHHhCCCeEEEEEEeCCc
Q psy2533 273 PERFYQNLS--VYRNQNGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGPIVTLEIAKQGA 332 (684)
Q Consensus 273 ~GIFV~sI~--GaAardGrLr~GDqIL~VNG~sl~g~Th~eAv~lLk~sg~~VtL~V~R~~~ 332 (684)
.+++|..|. ++|++.| |++||+|++|||+.+.++++.+++.+++..+..+.|.|.|.+.
T Consensus 32 ~~v~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~~~~~g~~v~l~v~R~g~ 92 (94)
T 2eeg_A 32 APLTISRVHAGSKAALAA-LCPGDLIQAINGESTELMTHLEAQNRIKGCHDHLTLSVSSGPS 92 (94)
T ss_dssp SCCEECCCCSSSHHHHTT-CCTTCEEEEETTEETTTCCHHHHHHHHHTCCSCEEEEEECCSS
T ss_pred CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEeCCC
Confidence 356777776 6777776 9999999999999999999999999999888899999988653
No 302
>2eeh_A PDZ domain-containing protein 7; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.36 E-value=1e-06 Score=76.79 Aligned_cols=59 Identities=22% Similarity=0.317 Sum_probs=52.7
Q ss_pred CCcEEEecc--hhhhhcCCCCCCCEEEEECCEecCCCCHHHHHHHHHhCCCeEEEEEEeCCcc
Q psy2533 273 PERFYQNLS--VYRNQNGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGPIVTLEIAKQGAI 333 (684)
Q Consensus 273 ~GIFV~sI~--GaAardGrLr~GDqIL~VNG~sl~g~Th~eAv~lLk~sg~~VtL~V~R~~~~ 333 (684)
.|++|..|. ++|++.| |++||+|++|||..+.++++.+++.+++. +..|.|.|.|.+..
T Consensus 36 ~gv~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~~~~-~~~v~l~v~R~g~~ 96 (100)
T 2eeh_A 36 LGIFVSKVEEGSSAERAG-LCVGDKITEVNGLSLESTTMGSAVKVLTS-SSRLHMMVRRMGSG 96 (100)
T ss_dssp CCEEEEEECTTSHHHHHT-CCSSCEEEEETTEECSSCCHHHHHHHHHS-CSSEEEEEEECSCC
T ss_pred CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHhhcC-CCEEEEEEEECCcC
Confidence 478999987 7888888 99999999999999999999999999987 78999999997643
No 303
>1wf7_A Enigma homologue protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.36 E-value=7.4e-07 Score=78.04 Aligned_cols=60 Identities=20% Similarity=0.242 Sum_probs=52.1
Q ss_pred CcEEEecc--hhhhhcCCCCCCCEEEEECCEecCCCCHHHHHHHHHhCCCeEEEEEEeCCccc
Q psy2533 274 ERFYQNLS--VYRNQNGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGPIVTLEIAKQGAIY 334 (684)
Q Consensus 274 GIFV~sI~--GaAardGrLr~GDqIL~VNG~sl~g~Th~eAv~lLk~sg~~VtL~V~R~~~~~ 334 (684)
+++|..|. ++|++.| |++||+|++|||..+.++++.+++.+++..+..|.|.|.|.+...
T Consensus 30 ~v~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~~~~~g~~v~l~v~R~g~~~ 91 (103)
T 1wf7_A 30 PLTISSLKDGGKASQAH-VRIGDVVLSIDGISAQGMTHLEAQNKIKACTGSLNMTLQRASAAA 91 (103)
T ss_dssp EEEECCCCTTCHHHHTT-CCTTCBEEEETTEECSSCCHHHHHHHHHHCSSEEEEEECCCSCCC
T ss_pred CEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEeCCCcC
Confidence 46777776 6788877 999999999999999999999999999988999999998876543
No 304
>1v5q_A GRIP1 homolog, glutamate receptor interacting protein 1A-L homolog; PDZ domain, cellular signaling, structural genomics; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.35 E-value=9.9e-07 Score=79.88 Aligned_cols=61 Identities=26% Similarity=0.283 Sum_probs=53.9
Q ss_pred CCcEEEecc--hhhhhcCCCCCCCEEEEECCEecCCCCHHHHHHHHHhC--CCeEEEEEEeCCcc
Q psy2533 273 PERFYQNLS--VYRNQNGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRT--GPIVTLEIAKQGAI 333 (684)
Q Consensus 273 ~GIFV~sI~--GaAardGrLr~GDqIL~VNG~sl~g~Th~eAv~lLk~s--g~~VtL~V~R~~~~ 333 (684)
.+++|..|. ++|++.|.|++||+|++|||+.+.++++.++..+|+.. +..|+|.|.|....
T Consensus 45 ~~~~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~~~~ 109 (122)
T 1v5q_A 45 SPPLISYIEADSPAERCGVLQIGDRVMAINGIPTEDSTFEEANQLLRDSSITSKVTLEIEFDVAE 109 (122)
T ss_dssp SCCEEEEECTTSHHHHSCCCCTTCCEEEETTEESSSSCHHHHHHHHHHHTTTTCEEEEEEEECCC
T ss_pred CCcEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCeEEEEEEECCcc
Confidence 457888887 78888887999999999999999999999999999886 67999999997653
No 305
>2h2b_A Tight junction protein ZO-1; PDZ domain, phage derived high affinity ligand, cell adhesio; 1.60A {Homo sapiens} PDB: 2h2c_A 2h3m_A 2rrm_A
Probab=98.35 E-value=1.2e-06 Score=76.91 Aligned_cols=60 Identities=18% Similarity=0.268 Sum_probs=53.0
Q ss_pred CCCcEEEecc--hhhhhcCCCCCCCEEEEECCEecCCCCHHHHHHHHHhCCCeEEEEEEeCCcc
Q psy2533 272 DPERFYQNLS--VYRNQNGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGPIVTLEIAKQGAI 333 (684)
Q Consensus 272 d~GIFV~sI~--GaAardGrLr~GDqIL~VNG~sl~g~Th~eAv~lLk~sg~~VtL~V~R~~~~ 333 (684)
..|++|..|. ++|+ ++|++||+|++|||+++.++++.+++..++..+..|.|.|.|.+..
T Consensus 38 ~~gv~V~~V~~~spA~--agl~~GD~I~~vng~~v~~~~~~~~~~~~~~~g~~v~l~v~R~~~~ 99 (107)
T 2h2b_A 38 ETSIVISDVLKGGPAE--GQLQENDRVAMVNGVSMDNVEHAFAVQQLRKSGKNAKITIRRKKGG 99 (107)
T ss_dssp CCCEEEEEECTTSTTB--TTBCTTCEEEEETTEECTTCCHHHHHHHHHTCCSEEEEEEEEESCC
T ss_pred CCCEEEEEECCCCchh--hCCCCCCEEEEECCEECCCccHHHHHHHhhCCCCEEEEEEEECCCC
Confidence 4689999997 5666 7799999999999999999999999998888899999999987654
No 306
>1vb7_A PDZ and LIM domain 2; PDZ domain PDZ-LIM protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.33 E-value=7.8e-07 Score=76.65 Aligned_cols=59 Identities=14% Similarity=0.277 Sum_probs=51.1
Q ss_pred CCcEEEecc--hhhhhcCCCCCCCEEEEECCEecCCCCHHHHHHHHHhCCCeEEEEEEeCCc
Q psy2533 273 PERFYQNLS--VYRNQNGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGPIVTLEIAKQGA 332 (684)
Q Consensus 273 ~GIFV~sI~--GaAardGrLr~GDqIL~VNG~sl~g~Th~eAv~lLk~sg~~VtL~V~R~~~ 332 (684)
.|++|..|. ++|++.| |++||+|++|||..+.++++.++..+|+..+..|+|.|.|.+.
T Consensus 30 ~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v~l~v~R~g~ 90 (94)
T 1vb7_A 30 TPIIVTKVTERGKAEAAD-LRPGDIIVAINGQSAENMLHAEAQSKIRQSASPLRLQLDRSSG 90 (94)
T ss_dssp EEEECCCBCTTSSHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHTCCSSEEEEEECCCC
T ss_pred CCeEEEEECCCCHHHHCC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCcEEEEEEECCc
Confidence 356777776 6777766 9999999999999999999999999999888899999998754
No 307
>2edz_A PDZ domain-containing protein 1; CFTR-associated protein of 70 kDa, Na/PI cotransporter C- terminal-associated protein, NAPI-CAP1; NMR {Mus musculus}
Probab=98.31 E-value=1.1e-06 Score=78.34 Aligned_cols=60 Identities=18% Similarity=0.313 Sum_probs=53.5
Q ss_pred CCcEEEecc--hhhhhcCCCCCCCEEEEECCEecCCCCHHHHHHHHHhCCCeEEEEEEeCCcc
Q psy2533 273 PERFYQNLS--VYRNQNGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGPIVTLEIAKQGAI 333 (684)
Q Consensus 273 ~GIFV~sI~--GaAardGrLr~GDqIL~VNG~sl~g~Th~eAv~lLk~sg~~VtL~V~R~~~~ 333 (684)
.|++|..|. ++|++.| |++||+|++|||+.+.++++.+++.+|+..+..|.|.|.|.+..
T Consensus 38 ~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v~l~v~R~~~~ 99 (114)
T 2edz_A 38 DGHLIRVIEEGSPAEKAG-LLDGDRVLRINGVFVDKEEHAQVVELVRKSGNSVTLLVLDGDSY 99 (114)
T ss_dssp CSCEEECCCTTCTTGGGT-CCTTCEEEEESSSBCSSSCHHHHHHHHHHTCSEEEEEEECHHHH
T ss_pred CCeEEEEeCCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCEEEEEEEECCcc
Confidence 467888887 6788877 99999999999999999999999999998899999999987643
No 308
>2vz5_A TAX1-binding protein 3; WNT signaling pathway, protein binding, nucleus, cytoplasm, PDZ domain; 1.74A {Homo sapiens} PDB: 3dj1_A 3diw_A 2l4s_A 2l4t_A 3gj9_A 2kg2_A 3dj3_A
Probab=98.30 E-value=1.8e-06 Score=80.50 Aligned_cols=62 Identities=24% Similarity=0.396 Sum_probs=53.6
Q ss_pred CCCcEEEecc--hhhhhcCCCCCCCEEEEECCEecCCCCHHHHHHHHHh-CCCeEEEEEEeCCccc
Q psy2533 272 DPERFYQNLS--VYRNQNGRLQAGDQLLKVDGQSLVGITQEKAAEYLVR-TGPIVTLEIAKQGAIY 334 (684)
Q Consensus 272 d~GIFV~sI~--GaAardGrLr~GDqIL~VNG~sl~g~Th~eAv~lLk~-sg~~VtL~V~R~~~~~ 334 (684)
..|++|..|. ++|++.| |++||+|++|||+.+.++++.+++.+|+. .+..|.|.|.|.+...
T Consensus 63 ~~gv~V~~V~~~spA~~aG-L~~GD~I~~vng~~v~~~~~~~~~~~l~~~~g~~v~l~v~R~g~~~ 127 (139)
T 2vz5_A 63 DKGIYVTRVSEGGPAEIAG-LQIGDKIMQVNGWDMTMVTHDQARKRLTKRSEEVVRLLVTRQSLQK 127 (139)
T ss_dssp CCCEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHCCTTCSEEEEEEEECC---
T ss_pred CCCEEEEEECCCCHHHHCC-CCCCCEEEEECCEEcCCCCHHHHHHHHHhCCCCEEEEEEEECCEEE
Confidence 4689999997 7888888 99999999999999999999999999987 4678999999987543
No 309
>3tsv_A Tight junction protein ZO-1; PDZ, scaffolding, JAM, cell adhesion; 1.99A {Homo sapiens} PDB: 3shu_A
Probab=98.30 E-value=1.1e-06 Score=80.33 Aligned_cols=62 Identities=27% Similarity=0.456 Sum_probs=54.1
Q ss_pred CCcEEEecc--hhhhhcCCCCCCCEEEEECCEecCCCCHHHHHHHHHh--CCCeEEEEEEeCCcccc
Q psy2533 273 PERFYQNLS--VYRNQNGRLQAGDQLLKVDGQSLVGITQEKAAEYLVR--TGPIVTLEIAKQGAIYH 335 (684)
Q Consensus 273 ~GIFV~sI~--GaAardGrLr~GDqIL~VNG~sl~g~Th~eAv~lLk~--sg~~VtL~V~R~~~~~~ 335 (684)
.|+||..|. ++|++.| |++||+|++|||+.+.++++.+++.+|+. .+..|.|.|.|.+..+.
T Consensus 51 ~gv~V~~V~~gspA~~aG-L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~~~~~~ 116 (124)
T 3tsv_A 51 VGIFVAGVLEDSPAAKEG-LEEGDQILRVNNVDFTNIIREEAVLFLLDLPKGEEVTILAQKKKDVYR 116 (124)
T ss_dssp SCEEEEEECTTCHHHHTT-CCTTEEEEEETTEECSSCCHHHHHHHHHHSCTTCEEEEEEEECHHHHH
T ss_pred CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhcCCCCEEEEEEEECCchhh
Confidence 578999987 7888877 99999999999999999999999998884 67899999999866543
No 310
>1y7n_A Amyloid beta A4 precursor protein-binding family A member 1; copper chaperone for superoxide dismutase, neuronal adaptor, protein transport; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.28 E-value=1.5e-06 Score=75.27 Aligned_cols=54 Identities=19% Similarity=0.340 Sum_probs=48.1
Q ss_pred EEEecc--hhhhhcCCCCCCCEEEEECCEecCCCCHHHHHHHHHhCCCeEEEEEEeC
Q psy2533 276 FYQNLS--VYRNQNGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGPIVTLEIAKQ 330 (684)
Q Consensus 276 FV~sI~--GaAardGrLr~GDqIL~VNG~sl~g~Th~eAv~lLk~sg~~VtL~V~R~ 330 (684)
+|..|. ++|++.| |++||+|++|||.++.++++.++..+|+..+..|.|.|.+.
T Consensus 34 ~V~~V~~~spA~~aG-L~~GD~Il~Ing~~v~~~~~~~~~~~l~~~g~~v~l~v~p~ 89 (90)
T 1y7n_A 34 IICSLMRGGIAERGG-VRVGHRIIEINGQSVVATPHEKIVHILSNAVGEIHMKTMPA 89 (90)
T ss_dssp EEEEECTTSHHHHHT-CCSSCEEEEETTEECTTSCHHHHHHHHHHCCEEEEEEEECC
T ss_pred EEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEEC
Confidence 666665 7888887 99999999999999999999999999999889999998753
No 311
>1v5l_A PDZ and LIM domain 3; actinin alpha 2 associated LIM protein; PDZ domain, cytoskeleton, actin binding, structural genomics; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.28 E-value=8.1e-07 Score=77.92 Aligned_cols=61 Identities=16% Similarity=0.222 Sum_probs=52.1
Q ss_pred CcEEEecc--hhhhhcCCCCCCCEEEEECCEecCCCCHHHHHHHHHhCCCeEEEEEEeCCcccc
Q psy2533 274 ERFYQNLS--VYRNQNGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGPIVTLEIAKQGAIYH 335 (684)
Q Consensus 274 GIFV~sI~--GaAardGrLr~GDqIL~VNG~sl~g~Th~eAv~lLk~sg~~VtL~V~R~~~~~~ 335 (684)
+++|..|. ++|++.| |++||+|++|||+.+.++++.++..+|+..+..|.|.|.|.+...+
T Consensus 30 ~~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v~l~v~R~g~~~~ 92 (103)
T 1v5l_A 30 PLVITRITPGSKAAAAN-LCPGDVILAIDGFGTESMTHADAQDRIKAASYQLCLKIDRAETRLW 92 (103)
T ss_dssp EEECSCBCTTSTTGGGT-CCTTCBEEEETTEECSSCCHHHHHHHHTTCCSEEECEECCCTTTTS
T ss_pred CeEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEEEEEEECCeEcc
Confidence 45666665 6677765 9999999999999999999999999999888899999999876544
No 312
>3suz_A Amyloid beta A4 precursor protein-binding family 2; APP binding; 2.70A {Rattus norvegicus} PDB: 1u3b_A 1u39_A 1x45_A 1u37_A 1u38_A 2yt8_A
Probab=98.27 E-value=1.2e-07 Score=102.49 Aligned_cols=68 Identities=24% Similarity=0.434 Sum_probs=0.0
Q ss_pred CCCcccEEEEeccCCCCCcccEEEEEecCCChhcccCccccCCeeeecCCeecCCCCHHHHHHHHHcCCCEEEEEEEec
Q psy2533 100 LRQEAKLSEMSEEGAGQDRLGIYIKSVVKGGAADANGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGPIVTLEIAKQ 178 (684)
Q Consensus 100 ~~~GLGfsI~GG~~~~~~~~gIfIs~V~pGGpA~r~GrLqvGDrILaVNG~sl~g~sh~eAV~lLk~sg~~V~LvV~R~ 178 (684)
...+|||++.+| +|..|.+||||+++| |++||+|++|||.++.+++|.+++.+|+..+..|.|+|...
T Consensus 306 ~~~~lG~~i~~g----------~I~~V~~gs~A~~aG-L~~GD~Il~VNg~~v~~~s~~~~~~~l~~~~~~v~L~V~p~ 373 (388)
T 3suz_A 306 LKYQLGFSVQNG----------IICSLMRGGIAERGG-VRVGHRIIEINGQSVVATAHEKIVQALSNSVGEIHMKTMPA 373 (388)
T ss_dssp -------------------------------------------------------------------------------
T ss_pred CCCccceEEecC----------EEEEeecCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEEEEEEec
Confidence 345788887642 899999999999999 99999999999999999999999999999999999988653
No 313
>3k1r_A Harmonin; protein-protein complex, alternative splicing, coiled coil, deafness, hearing, non-syndromic deafness, polymorphism; 2.30A {Homo sapiens} PDB: 2kbq_A 2kbr_A 2lsr_A
Probab=98.26 E-value=1.2e-06 Score=85.41 Aligned_cols=59 Identities=24% Similarity=0.410 Sum_probs=53.8
Q ss_pred CCcEEEecc--hhhhhcCCCCCCCEEEEECCEecCCCCHHHHHHHHHhCCCeEEEEEEeCCcc
Q psy2533 273 PERFYQNLS--VYRNQNGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGPIVTLEIAKQGAI 333 (684)
Q Consensus 273 ~GIFV~sI~--GaAardGrLr~GDqIL~VNG~sl~g~Th~eAv~lLk~sg~~VtL~V~R~~~~ 333 (684)
.|+||..|. |+|++.| |++||+|++|||..+.++++.+++.+|+. +..|+|.|.|.+..
T Consensus 110 ~~~~V~~V~~gspA~~aG-L~~GD~Il~vng~~v~~~~~~~~~~~l~~-~~~v~l~v~r~g~~ 170 (192)
T 3k1r_A 110 CGLFISHLIKGGQADSVG-LQVGDEIVRINGYSISSCTHEEVINLIRT-EKTVSIKVRHIGLI 170 (192)
T ss_dssp EEEEEEEECTTSHHHHTT-CCTTEEEEEETTEECTTCCHHHHHHHHTS-SSEEEEEEEECCEE
T ss_pred CCEEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHcC-CCeEEEEEEECCcc
Confidence 478999987 7888888 99999999999999999999999999988 89999999998764
No 314
>1b8q_A Protein (neuronal nitric oxide synthase); PDZ domain, NNOS, nitric oxide synthase, oxidoreductase; NMR {Rattus norvegicus} SCOP: b.36.1.1
Probab=98.25 E-value=2.7e-06 Score=77.19 Aligned_cols=62 Identities=26% Similarity=0.329 Sum_probs=52.9
Q ss_pred CCcEEEecc--hhhhhcCCCCCCCEEEEECCEecCCCCHHHHHHHHHhC-CCeEEEEEEeCCccc
Q psy2533 273 PERFYQNLS--VYRNQNGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRT-GPIVTLEIAKQGAIY 334 (684)
Q Consensus 273 ~GIFV~sI~--GaAardGrLr~GDqIL~VNG~sl~g~Th~eAv~lLk~s-g~~VtL~V~R~~~~~ 334 (684)
.+++|..|. ++|++.|-|++||+|++|||..+.++++.++..+|+.. +..+.|.|.|.+...
T Consensus 33 ~~~~V~~V~~~spA~~aGll~~GD~I~~ing~~v~~~~~~~~~~~l~~~~g~~v~l~v~R~g~~~ 97 (127)
T 1b8q_A 33 PPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDSALEVLRGIASETHVVLILRGPEGF 97 (127)
T ss_dssp SCEEECCCSSSSSHHHHSSCCTTTCCCEETTEECSSSCHHHHHHHHHSCCSSCEEEEEECCCCSE
T ss_pred CCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCeEEEEEEeCCceE
Confidence 367777776 78888885599999999999999999999999999874 578999999987543
No 315
>3shw_A Tight junction protein ZO-1; PDZ-SH3-GUK supramodule, cell adhesion; 2.90A {Homo sapiens}
Probab=98.24 E-value=8e-07 Score=98.54 Aligned_cols=63 Identities=27% Similarity=0.443 Sum_probs=56.8
Q ss_pred CCcEEEecc--hhhhhcCCCCCCCEEEEECCEecCCCCHHHHHHHHHh--CCCeEEEEEEeCCccccc
Q psy2533 273 PERFYQNLS--VYRNQNGRLQAGDQLLKVDGQSLVGITQEKAAEYLVR--TGPIVTLEIAKQGAIYHG 336 (684)
Q Consensus 273 ~GIFV~sI~--GaAardGrLr~GDqIL~VNG~sl~g~Th~eAv~lLk~--sg~~VtL~V~R~~~~~~~ 336 (684)
.|+||..|. |+|++.| |++||+|++|||+++.++++++++.+|+. .+..|+|.|.|.+..+..
T Consensus 23 ~Gi~V~~V~~gspA~~aG-L~~GD~Il~VNG~~v~~~t~~e~~~~L~~~~~g~~v~L~V~r~g~~~~~ 89 (468)
T 3shw_A 23 VGIFVAGVLEDSPAAKEG-LEEGDQILRVNNVDFTNIIREEAVLFLLDLPKGEEVTILAQKKKDVYRR 89 (468)
T ss_dssp TEEEEEEECSSSHHHHTT-CCTTEEEEEETTEECTTCCHHHHHHHHHHSCTTSEEEEEEEECHHHHHH
T ss_pred CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhcCCCCEEEEEEEECCccchh
Confidence 579999997 7888877 99999999999999999999999999998 788999999998766554
No 316
>2kjp_A Uncharacterized protein YLBL; mixed alpha-beta protein, cell membrane, hydrolase, membrane, protease, serine protease, transmembrane; NMR {Bacillus subtilis}
Probab=98.20 E-value=6.7e-07 Score=77.66 Aligned_cols=58 Identities=33% Similarity=0.572 Sum_probs=50.7
Q ss_pred cEEEEEecCCChhcccCccccCCeeeecCCeecCCCCHHHHHHHHHcC--CCEEEEEEEecCcc
Q psy2533 120 GIYIKSVVKGGAADANGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRT--GPIVTLEIAKQGAI 181 (684)
Q Consensus 120 gIfIs~V~pGGpA~r~GrLqvGDrILaVNG~sl~g~sh~eAV~lLk~s--g~~V~LvV~R~~~~ 181 (684)
|++|..|.++|||++ | |++||+|++|||.++.+ ..+...+|... +..|.|+|.|....
T Consensus 2 Gv~V~~V~~~spA~~-G-L~~GD~I~~InG~~v~~--~~~l~~~l~~~~~g~~v~l~v~R~g~~ 61 (91)
T 2kjp_A 2 GIYASSVVENMPAKG-K-IEVGDKIISADGKNYQS--AEKLIDYISSKKAGDKVTLKIEREEKE 61 (91)
T ss_dssp CSSCCCCCCSSCCSS-C-CCSSCEEEEETTBCCSS--HHHHHHHHSSCCSSCEECEEEESSSCE
T ss_pred ceEEEEECCCChHHH-c-CCCCCEEEEECCEECCC--HHHHHHHHHcCCCCCEEEEEEEECCEE
Confidence 578999999999999 8 99999999999999976 57888888765 78899999998654
No 317
>2pzd_A Serine protease HTRA2; PDZ domain, apoptosis, mitochondria, peptid module, hydrolase; 2.75A {Homo sapiens} SCOP: b.36.1.4
Probab=98.18 E-value=2.8e-06 Score=75.42 Aligned_cols=59 Identities=24% Similarity=0.390 Sum_probs=52.5
Q ss_pred ccEEEEEecCCChhcccCccccCCeeeecCCeecCCCCHHHHHHHHHcCCCEEEEEEEecCcc
Q psy2533 119 LGIYIKSVVKGGAADANGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGPIVTLEIAKQGAI 181 (684)
Q Consensus 119 ~gIfIs~V~pGGpA~r~GrLqvGDrILaVNG~sl~g~sh~eAV~lLk~sg~~V~LvV~R~~~~ 181 (684)
.|++|..|.++|||+++| |++||.|++|||.++.+ ..+...+|+. +..+.|+|.|....
T Consensus 35 ~gv~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~--~~~~~~~l~~-~~~v~l~v~R~g~~ 93 (113)
T 2pzd_A 35 HGVLIHKVILGSPAHRAG-LRPGDVILAIGEQMVQN--AEDVYEAVRT-QSQLAVQIRRGRET 93 (113)
T ss_dssp SCEEEEEEBTTSHHHHHT-CCTTCEEEEETTEECCS--HHHHHHHHHH-CSSEEEEEEETTEE
T ss_pred CCeEEEEeCCCChHHHcC-CCCCCEEEEECCEECCC--HHHHHHHHhC-CCeEEEEEEECCEE
Confidence 589999999999999999 99999999999999975 6778888877 67899999997654
No 318
>2kjd_A Sodium/hydrogen exchange regulatory cofactor NHE- RF1; PDZ domain, protein, acetylation, cell projection, disease mutation, membrane; NMR {Homo sapiens}
Probab=98.18 E-value=3.3e-06 Score=76.45 Aligned_cols=60 Identities=18% Similarity=0.355 Sum_probs=51.3
Q ss_pred CCcEEEecc--hhhhhcCCCCCCCEEEEECCEecCCCCHHHHHHHHHhCCC-eEEEEEEeCCcc
Q psy2533 273 PERFYQNLS--VYRNQNGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGP-IVTLEIAKQGAI 333 (684)
Q Consensus 273 ~GIFV~sI~--GaAardGrLr~GDqIL~VNG~sl~g~Th~eAv~lLk~sg~-~VtL~V~R~~~~ 333 (684)
.|++|..|. ++|++.| |++||+|++|||..+.++++.++..+|+.... .+.|.|.|.+..
T Consensus 33 ~gv~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~~~~l~v~R~g~~ 95 (128)
T 2kjd_A 33 PGQFIRSVDPDSPAEASG-LRAQDRIVEVNGVCMEGKQHGDVVSAIRAGGDETKLLVVDRETDE 95 (128)
T ss_dssp CSEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHTTCSEEEEEEECHHHHH
T ss_pred CCEEEEEeCCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCEEEEEEEeCCcc
Confidence 378898887 7888888 99999999999999999999999999988644 577888886543
No 319
>2z17_A Pleckstrin homology SEC7 and coiled-coil domains- binding protein; PDZ domain, cytoplasm, membrane, polymorphism, protein binding; 2.70A {Homo sapiens}
Probab=98.18 E-value=2.1e-06 Score=75.31 Aligned_cols=55 Identities=25% Similarity=0.401 Sum_probs=49.7
Q ss_pred CCCcEEEecc--hhhhhcCCCCCCCEEEEECCEecCCCCHHHHHHHHHhCCCeEEEEE
Q psy2533 272 DPERFYQNLS--VYRNQNGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGPIVTLEI 327 (684)
Q Consensus 272 d~GIFV~sI~--GaAardGrLr~GDqIL~VNG~sl~g~Th~eAv~lLk~sg~~VtL~V 327 (684)
..+++|..|. ++|++.| |++||+|++|||+.+.++++.+++.+|+..+..|+|.|
T Consensus 47 ~~~~~V~~V~~~spA~~aG-l~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~~v~l~v 103 (104)
T 2z17_A 47 EMFTLICKIQEDSPAHCAG-LQAGDVLANINGVSTEGFTYKQVVDLIRSSGNLLTIET 103 (104)
T ss_dssp SCCEEEEEECTTSHHHHHT-CCTTCBCCEETTEECTTCCHHHHHHHHHHTTTEEEEEC
T ss_pred CCCeEEEEECCCChHHHcC-CCCCCEEEEECCEEcCCCCHHHHHHHHHhCCCcEEEEE
Confidence 4578999997 7888888 99999999999999999999999999999888888875
No 320
>2kl1_A YLBL protein; structure genomics, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium; NMR {Geobacillus thermodenitrificans}
Probab=98.17 E-value=2e-06 Score=74.77 Aligned_cols=59 Identities=27% Similarity=0.473 Sum_probs=51.4
Q ss_pred ccEEEEEecCCChhcccCccccCCeeeecCCeecCCCCHHHHHHHHHcC--CCEEEEEEEecCcc
Q psy2533 119 LGIYIKSVVKGGAADANGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRT--GPIVTLEIAKQGAI 181 (684)
Q Consensus 119 ~gIfIs~V~pGGpA~r~GrLqvGDrILaVNG~sl~g~sh~eAV~lLk~s--g~~V~LvV~R~~~~ 181 (684)
.|++|..|.++|||++ | |++||+|++|||.++.+ ..+...+|... +..+.|.|.|....
T Consensus 5 ~Gv~V~~V~~~spA~~-G-L~~GD~Il~InG~~v~~--~~~l~~~l~~~~~g~~v~l~v~R~g~~ 65 (94)
T 2kl1_A 5 KGVYVMSVLPNMPAAG-R-LEAGDRIAAIDGQPINT--SEQIVSYVREKQAGDRVRVTFIRDRKQ 65 (94)
T ss_dssp CCEECCCCCTTSTTBT-T-BCTTCEEEEETTBCCCC--HHHHHHHHHHSCTTCCEEEEEEETTEE
T ss_pred CcEEEEEECCCChHHh-C-CCCCCEEEEECCEECCC--HHHHHHHHHhCCCCCEEEEEEEECCEE
Confidence 4799999999999998 8 99999999999999976 46777888764 78899999998754
No 321
>1qau_A Neuronal nitric oxide synthase (residues 1-130); beta-finger, oxidoreductase; 1.25A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1qav_B
Probab=98.16 E-value=5.6e-06 Score=73.26 Aligned_cols=62 Identities=26% Similarity=0.329 Sum_probs=53.7
Q ss_pred CCcEEEecc--hhhhhcCCCCCCCEEEEECCEecCCCCHHHHHHHHHhC-CCeEEEEEEeCCccc
Q psy2533 273 PERFYQNLS--VYRNQNGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRT-GPIVTLEIAKQGAIY 334 (684)
Q Consensus 273 ~GIFV~sI~--GaAardGrLr~GDqIL~VNG~sl~g~Th~eAv~lLk~s-g~~VtL~V~R~~~~~ 334 (684)
.+++|..+. ++|++.|-|++||+|++|||..+.++++.++..+|+.. +..+.|.|.|.+...
T Consensus 26 ~~~~V~~v~~~spA~~aGll~~GD~I~~ing~~v~~~~~~~~~~~l~~~~g~~v~l~v~R~g~~~ 90 (112)
T 1qau_A 26 PPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDSALEVLRGIASETHVVLILRGPEGF 90 (112)
T ss_dssp SCEEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTSCHHHHHHHHHHSCSSSEEEEEEECCTTS
T ss_pred CCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCcEEEEEEeCCccc
Confidence 468888887 78888885599999999999999999999999999875 578999999987544
No 322
>1w9e_A Syntenin 1; cell adhesion, adhesion/complex, PDZ domain, scaffolding protein signaling protein; 1.56A {Homo sapiens} SCOP: b.36.1.1 b.36.1.1 PDB: 1n99_A 1v1t_A 1obz_A 1w9o_A 1w9q_A 1ybo_A
Probab=98.16 E-value=7.7e-06 Score=77.38 Aligned_cols=75 Identities=24% Similarity=0.423 Sum_probs=63.3
Q ss_pred ceEEEEEecCCCcccEEEEeccCCCCCcccEEEEEecCCChhcccCccccCCeeeecCCeecCCCCHHHHHHHHHcCCCE
Q psy2533 91 MKSHSVRDMLRQEAKLSEMSEEGAGQDRLGIYIKSVVKGGAADANGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGPI 170 (684)
Q Consensus 91 ~~~V~v~k~~~~GLGfsI~GG~~~~~~~~gIfIs~V~pGGpA~r~GrLqvGDrILaVNG~sl~g~sh~eAV~lLk~sg~~ 170 (684)
..++.+.+.....|||.+.. + +|..|.+++||+++| |++||+|++|||.++.++.+..+...++..+..
T Consensus 89 ~~~v~l~~~~~~~lG~~~~~---------g-~v~~v~~~s~a~~aG-l~~GD~I~~ing~~v~~~~~~~v~~~v~r~g~~ 157 (166)
T 1w9e_A 89 ERTITMHKDSTGHVGFIFKN---------G-KITSIVKDSSAARNG-LLTEHNICEINGQNVIGLKDSQIADILSTSGTV 157 (166)
T ss_dssp CEEEEEECCTTSCCSEEEET---------T-EEEEECTTSHHHHTT-CCSSEEEEEETTEECTTCCHHHHHHHHHHSCSE
T ss_pred cEEEEEecCCCCcEeEEEeC---------C-EEEEEccCCHHHHcC-CCCCCEEEEECCEECCCCChHHHHHHHhhCCCE
Confidence 34555554455678998871 3 899999999999999 999999999999999999999999888888888
Q ss_pred EEEEEE
Q psy2533 171 VTLEIA 176 (684)
Q Consensus 171 V~LvV~ 176 (684)
+.+.|.
T Consensus 158 ~~l~v~ 163 (166)
T 1w9e_A 158 VTITIM 163 (166)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 888774
No 323
>2eaq_A LIM domain only protein 7; conserved hypothetical protein, structural genomics, NPPSFA; 1.46A {Homo sapiens}
Probab=98.15 E-value=3.2e-06 Score=71.80 Aligned_cols=58 Identities=12% Similarity=0.251 Sum_probs=49.7
Q ss_pred CCcEEEecc--hhhhhcCCCCCCCEEEEECCEecCCCCHHHHHHHHHh--CCCeEEEEEEeCC
Q psy2533 273 PERFYQNLS--VYRNQNGRLQAGDQLLKVDGQSLVGITQEKAAEYLVR--TGPIVTLEIAKQG 331 (684)
Q Consensus 273 ~GIFV~sI~--GaAardGrLr~GDqIL~VNG~sl~g~Th~eAv~lLk~--sg~~VtL~V~R~~ 331 (684)
.|++|..|. ++|++.| |++||+|++|||..+.+.++.++..+|+. .+..|.|.|.|.+
T Consensus 28 ~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~g 89 (90)
T 2eaq_A 28 PGIFVASVEAGSPAEFSQ-LQVDDEIIAINNTKFSYNDSKEWEEAMAKAQETGHLVMDVRRYG 89 (90)
T ss_dssp TEEEEEEECTTSHHHHTT-CCTTCEEEEETTEECCTTCHHHHHHHHHHHHHHTEEEEEEEEEC
T ss_pred CCEEEEEECCCChHHHcC-CCCCCEEEEECCEEccCCCHHHHHHHHHhcCCCCEEEEEEEeCC
Confidence 468888887 6777776 99999999999999988899999999985 5789999998864
No 324
>2lob_A Golgi-associated PDZ and coiled-coil motif-contai protein; structural protein-hydrolase complex, peptide binding protei; NMR {Homo sapiens}
Probab=97.42 E-value=3.1e-07 Score=82.65 Aligned_cols=56 Identities=20% Similarity=0.328 Sum_probs=49.3
Q ss_pred CCcEEEecc--hhhhhcCCCCCCCEEEEECCEecCCCCHHHHHHHHHhCCCeEEEEEE
Q psy2533 273 PERFYQNLS--VYRNQNGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGPIVTLEIA 328 (684)
Q Consensus 273 ~GIFV~sI~--GaAardGrLr~GDqIL~VNG~sl~g~Th~eAv~lLk~sg~~VtL~V~ 328 (684)
.|+||..|. |+|+++++|++||+|++|||.++.++++.+++.+|+..+..|+|.|.
T Consensus 53 ~gv~V~~V~~~spA~~~aGL~~GD~Il~ING~~v~~~~~~~~~~~l~~~~~~v~l~V~ 110 (112)
T 2lob_A 53 VPILISEIHPGQPADRCGGLHVGDAILAVNGVNLRDTKHKEAVTILSQQRGEIEFEVV 110 (112)
Confidence 367888886 78888788999999999999999999999999999988888888774
No 325
>1wh1_A KIAA1095 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.10 E-value=5.7e-06 Score=75.08 Aligned_cols=62 Identities=19% Similarity=0.394 Sum_probs=52.5
Q ss_pred CCCcEEEecc--hhhhhcCCCCCCCEEEEECCEecCCCCHHHHHHHHHhC-CCeEEEEEEeCCcccc
Q psy2533 272 DPERFYQNLS--VYRNQNGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRT-GPIVTLEIAKQGAIYH 335 (684)
Q Consensus 272 d~GIFV~sI~--GaAardGrLr~GDqIL~VNG~sl~g~Th~eAv~lLk~s-g~~VtL~V~R~~~~~~ 335 (684)
..|++|..|. ++|++.|+|++||+|++|||+.+. ++.++..+|+.. +..|.|.|.|.+....
T Consensus 47 ~~gv~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~--~~~~~~~~l~~~~g~~v~l~v~R~g~~~~ 111 (124)
T 1wh1_A 47 DIGIYISEIDPNSIAAKDGRIREGDRIIQINGIEVQ--NREEAVALLTSEENKNFSLLIARPELQLD 111 (124)
T ss_dssp CCCEEEEEECSSSHHHHTCCCCTTCEEEEESSCBCC--SHHHHHHHHTCSSCCSCCEEEEECSSCCC
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECC--CHHHHHHHHHhCCCCEEEEEEEECCEEee
Confidence 3589999997 788888779999999999999997 478999999875 6789999999875543
No 326
>1uf1_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.09 E-value=1.2e-05 Score=73.15 Aligned_cols=60 Identities=23% Similarity=0.418 Sum_probs=51.6
Q ss_pred CCcEEEecc--hhhhhcCCCCCCCEEEEECCEecCCCCHHHHHHHHHhCCCeEEEEEEeCCccc
Q psy2533 273 PERFYQNLS--VYRNQNGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGPIVTLEIAKQGAIY 334 (684)
Q Consensus 273 ~GIFV~sI~--GaAardGrLr~GDqIL~VNG~sl~g~Th~eAv~lLk~sg~~VtL~V~R~~~~~ 334 (684)
.|+||..|. ++|++.| |++||+|++|||+.+.++++.+++..++. +..|.|.|.|.+...
T Consensus 46 ~gv~V~~V~~~spA~~aG-L~~GD~I~~vng~~v~~~~~~~~~~~~~~-~~~v~l~v~R~g~~~ 107 (128)
T 1uf1_A 46 LGIYITGVDPGSEAEGSG-LKVGDQILEVNGRSFLNILHDEAVRLLKS-SRHLILTVKDVGRLP 107 (128)
T ss_dssp CCCEEEEECTTCHHHHHT-CCTTCEEEEETTEECSSCCHHHHHHHHTT-CSEEEEEEECCSCCS
T ss_pred CCEEEEEECCCCHHHHCC-CCCCCEEEEECCEECCCCCHHHHHHHHhc-CCeEEEEEEECCccc
Confidence 478999987 6788877 99999999999999999999888888876 468999999876544
No 327
>2d8i_A T-cell lymphoma invasion and metastasis 1 variant; PDZ domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.07 E-value=5e-06 Score=75.24 Aligned_cols=58 Identities=14% Similarity=0.334 Sum_probs=50.1
Q ss_pred CcEEEecc--hhhhhcCCCCCCCEEEEECCEecCCCCHHHHHHHHHhCCCeEEEEEEeCCccc
Q psy2533 274 ERFYQNLS--VYRNQNGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGPIVTLEIAKQGAIY 334 (684)
Q Consensus 274 GIFV~sI~--GaAardGrLr~GDqIL~VNG~sl~g~Th~eAv~lLk~sg~~VtL~V~R~~~~~ 334 (684)
|++|..|. ++|++.| |++||+|++|||..+.++++.++..+|+.. .+.|+|.|.....
T Consensus 45 gv~V~~V~~~spA~~aG-L~~GD~Il~Ing~~v~~~~~~~~~~~l~~~--~v~l~v~R~p~~~ 104 (114)
T 2d8i_A 45 RLYVNSVKETGLASKKG-LKAGDEILEINNRAADALNSSMLKDFLSQP--SLGLLVRTYPELE 104 (114)
T ss_dssp EEEEEECCTTSSHHHHT-CCTTCCEEEESSCBGGGCCHHHHHHHHTSS--EEEEEEEECCCSC
T ss_pred CEEEEEeCCCCHHHHcC-CCCCCEEEEECCEECCCcCHHHHHHHHhCC--cEEEEEEECCCCC
Confidence 67888887 7888887 999999999999999999999999999853 8999999876443
No 328
>2l97_A HTRA, putative serine protease; HTRA-PDZ, protein binding; NMR {Streptococcus pneumoniae}
Probab=98.07 E-value=5.9e-06 Score=76.31 Aligned_cols=60 Identities=20% Similarity=0.282 Sum_probs=51.5
Q ss_pred ccEEEEEecCCChhcccCccccCCeeeecCCeecCCCCHHHHHHHHHc--CCCEEEEEEEecCccc
Q psy2533 119 LGIYIKSVVKGGAADANGRLQAGDQLLKVDGQSLVGITQEKAAEYLVR--TGPIVTLEIAKQGAIY 182 (684)
Q Consensus 119 ~gIfIs~V~pGGpA~r~GrLqvGDrILaVNG~sl~g~sh~eAV~lLk~--sg~~V~LvV~R~~~~~ 182 (684)
.+++|..|.++|||+ +| |++||+|++|||.++.+. .+...+|.. .+..|.|+|.|.....
T Consensus 57 ~g~~V~~V~~~spA~-aG-L~~GD~I~~inG~~v~~~--~~l~~~l~~~~~g~~v~l~v~R~g~~~ 118 (134)
T 2l97_A 57 SGVIVRSVQSNMPAN-GH-LEKYDVITKVDDKEIASS--TDLQSALYNHSIGDTIKITYYRNGKEE 118 (134)
T ss_dssp SCEEEEECSTTSGGG-TT-SCSSCEEEEETTEECCCH--HHHHHHHHHSSTTCEEEEEEEETTEEE
T ss_pred CCEEEEEECCCCchH-HC-CCCCCEEEEECCEEcCCH--HHHHHHHHhCCCCCEEEEEEEECCEEE
Confidence 579999999999999 99 999999999999999764 566677765 4789999999987543
No 329
>2krg_A Na(+)/H(+) exchange regulatory cofactor NHE-RF1; acetylation, cell projection, disease mutation, membrane, phosphoprotein, polymorphism; NMR {Homo sapiens}
Probab=98.07 E-value=2.7e-06 Score=85.26 Aligned_cols=60 Identities=18% Similarity=0.352 Sum_probs=51.7
Q ss_pred CCcEEEecc--hhhhhcCCCCCCCEEEEECCEecCCCCHHHHHHHHHhCCCeE-EEEEEeCCcc
Q psy2533 273 PERFYQNLS--VYRNQNGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGPIV-TLEIAKQGAI 333 (684)
Q Consensus 273 ~GIFV~sI~--GaAardGrLr~GDqIL~VNG~sl~g~Th~eAv~lLk~sg~~V-tL~V~R~~~~ 333 (684)
.|+||..|. ++|++.| |++||+|++|||+.+.++++.+++.+|+..+..| .|.|.|.+..
T Consensus 33 ~gv~V~~V~~gSpA~~aG-L~~GD~Il~VNG~~V~~~s~~dl~~~l~~~g~~v~~l~V~R~g~~ 95 (216)
T 2krg_A 33 PGQFIRSVDPDSPAEASG-LRAQDRIVEVNGVCMEGKQHGDVVSAIRAGGDETKLLVVDRETDE 95 (216)
T ss_dssp CSCBEEEECTTSHHHHHT-CCTTCBCCEETTEECTTCCTHHHHHHHHHHCSEEEEEECCHHHHH
T ss_pred CCeEEEEeCCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhcCCeEEEEEEEECCEE
Confidence 367888887 7888887 9999999999999999999999999998888888 8888776543
No 330
>3i18_A LMO2051 protein; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.70A {Listeria monocytogenes} PDB: 2kjk_A 3i1e_A
Probab=98.06 E-value=6.2e-06 Score=72.20 Aligned_cols=59 Identities=24% Similarity=0.403 Sum_probs=50.6
Q ss_pred ccEEEEEecCCChhcccCccccCCeeeecCCeecCCCCHHHHHHHHHc--CCCEEEEEEEecCcc
Q psy2533 119 LGIYIKSVVKGGAADANGRLQAGDQLLKVDGQSLVGITQEKAAEYLVR--TGPIVTLEIAKQGAI 181 (684)
Q Consensus 119 ~gIfIs~V~pGGpA~r~GrLqvGDrILaVNG~sl~g~sh~eAV~lLk~--sg~~V~LvV~R~~~~ 181 (684)
.|++|..|.+++||+. | |++||+|++|||..+.+ ..+...+|.. .+..+.|+|.|....
T Consensus 7 ~Gv~V~~V~~~spA~~-G-L~~GD~I~~Ing~~v~~--~~dl~~~l~~~~~g~~v~l~v~R~g~~ 67 (100)
T 3i18_A 7 DGVYVMSVKDDVPAAD-V-LHAGDLITEIDGNAFKS--SQEFIDYIHSKKVGDTVKINYKHGDKN 67 (100)
T ss_dssp CCEEEEEECTTSGGGG-T-CCTTCEEEEETTBCCSS--HHHHHHHHHTSCTTCEEEEEEEETTEE
T ss_pred CCEEEEEeCCCCchHH-C-CCCCCEEEEECCEECCC--HHHHHHHHHhCCCCCEEEEEEEECCEE
Confidence 4899999999999995 8 99999999999999976 4677777775 478899999997654
No 331
>3tsz_A Tight junction protein ZO-1; PDZ3-SH3-GUK, scaffolding, JAM, tight junction, cell adhesio; 2.50A {Homo sapiens} PDB: 3tsw_A 3lh5_A
Probab=98.06 E-value=4.1e-06 Score=90.71 Aligned_cols=65 Identities=28% Similarity=0.468 Sum_probs=57.7
Q ss_pred CCCcEEEecc--hhhhhcCCCCCCCEEEEECCEecCCCCHHHHHHHHHh--CCCeEEEEEEeCCcccccc
Q psy2533 272 DPERFYQNLS--VYRNQNGRLQAGDQLLKVDGQSLVGITQEKAAEYLVR--TGPIVTLEIAKQGAIYHGL 337 (684)
Q Consensus 272 d~GIFV~sI~--GaAardGrLr~GDqIL~VNG~sl~g~Th~eAv~lLk~--sg~~VtL~V~R~~~~~~~~ 337 (684)
+.|+||..|. |+|++.| |++||+|++|||.++.++++++++.+|+. .|..|+|+|.|.+..+..+
T Consensus 30 ~~gi~V~~V~~gspA~~aG-L~~GD~Il~VnG~~v~~~~~~e~~~~l~~~~~g~~v~l~v~r~~~~~~~~ 98 (391)
T 3tsz_A 30 DVGIFVAGVLEDSPAAKEG-LEEGDQILRVNNVDFTNIIREEAVLFLLDLPKGEEVTILAQKKKDVYRRI 98 (391)
T ss_dssp TTEEEEEEECTTCHHHHTT-CCTTEEEEEETTEECTTCCHHHHHHHHHHSCTTSEEEEEEEECHHHHGGG
T ss_pred CCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhhcCCCeEEEEEeeCCcccccc
Confidence 3588999997 7888888 99999999999999999999999999995 7889999999987766553
No 332
>1uez_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.06 E-value=3.3e-06 Score=73.50 Aligned_cols=58 Identities=24% Similarity=0.400 Sum_probs=49.1
Q ss_pred CCcEEEecc--hhhhhcCCCCCCCEEEEECCEecCCCCHHHHHHHHHhCCCeEEEEEEeCCc
Q psy2533 273 PERFYQNLS--VYRNQNGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGPIVTLEIAKQGA 332 (684)
Q Consensus 273 ~GIFV~sI~--GaAardGrLr~GDqIL~VNG~sl~g~Th~eAv~lLk~sg~~VtL~V~R~~~ 332 (684)
.|+||..|. ++|++.| |++||+|++|||+.+.++++.+++.+++. +..|.|.|.|.+.
T Consensus 35 ~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~~~~-~~~v~l~v~R~g~ 94 (101)
T 1uez_A 35 VGIYVSLVEPGSLAEKEG-LRVGDQILRVNDKSLARVTHAEAVKALKG-SKKLVLSVYSAGR 94 (101)
T ss_dssp CCEEEEEECTTSHHHHHT-CCSSCCEEEETTEECSSCCHHHHHHHSSS-SSSCCEEECCCCC
T ss_pred CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCcCHHHHHHhhcC-CCeEEEEEEECCc
Confidence 478999887 7888887 99999999999999999999887777754 4679999987653
No 333
>1fc6_A Photosystem II D1 protease; D1 C-terminal processing protease, serine protease, serine- lysine catalytic DYAD, PDZ domain, photosynthesis; 1.80A {Scenedesmus obliquus} SCOP: b.36.1.3 c.14.1.2 PDB: 1fc9_A 1fc7_A 1fcf_A
Probab=98.02 E-value=1.2e-05 Score=86.53 Aligned_cols=76 Identities=21% Similarity=0.345 Sum_probs=63.8
Q ss_pred CCcccEEEEeccCCCCCcccEEEEEecCCChhcccCccccCCeeeecCCeecCCCCHHHHHHHHHc-CCCEEEEEEEecC
Q psy2533 101 RQEAKLSEMSEEGAGQDRLGIYIKSVVKGGAADANGRLQAGDQLLKVDGQSLVGITQEKAAEYLVR-TGPIVTLEIAKQG 179 (684)
Q Consensus 101 ~~GLGfsI~GG~~~~~~~~gIfIs~V~pGGpA~r~GrLqvGDrILaVNG~sl~g~sh~eAV~lLk~-sg~~V~LvV~R~~ 179 (684)
-.|+|+.+.... ....+++|..|.++|||+++| |++||+|++|||.++.+++..+++.+|+. .+..|.|+|.|..
T Consensus 84 ~~giG~~~~~~~---~~~~~~~V~~v~~~spA~~aG-l~~GD~I~~Ing~~v~~~~~~~~~~~l~~~~g~~v~l~v~r~g 159 (388)
T 1fc6_A 84 VTGVGLEITYDG---GSGKDVVVLTPAPGGPAEKAG-ARAGDVIVTVDGTAVKGMSLYDVSDLLQGEADSQVEVVLHAPG 159 (388)
T ss_dssp CBBCSEEEEECT---TCSSCEEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHHCBSTTCEEEEEEEETT
T ss_pred eEEEEEEEEEee---cCCCcEEEEEeCCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHhcCCCCEEEEEEEeCC
Confidence 357899887421 012479999999999999999 99999999999999999998999999975 4778999999876
Q ss_pred c
Q psy2533 180 A 180 (684)
Q Consensus 180 ~ 180 (684)
.
T Consensus 160 ~ 160 (388)
T 1fc6_A 160 A 160 (388)
T ss_dssp E
T ss_pred C
Confidence 4
No 334
>3qik_A Phosphatidylinositol 3,4,5-trisphosphate-dependen exchanger 1 protein; PDZ domain, structural genomics consortium, SGC, hydrolase R; 2.29A {Homo sapiens}
Probab=98.00 E-value=9.9e-06 Score=72.55 Aligned_cols=56 Identities=13% Similarity=0.181 Sum_probs=46.9
Q ss_pred CcEEEecc--hhhhhcCCCCCCCEEEEECCEecCCCCHHHHHHHHHh---CCCeEEEEEEeC
Q psy2533 274 ERFYQNLS--VYRNQNGRLQAGDQLLKVDGQSLVGITQEKAAEYLVR---TGPIVTLEIAKQ 330 (684)
Q Consensus 274 GIFV~sI~--GaAardGrLr~GDqIL~VNG~sl~g~Th~eAv~lLk~---sg~~VtL~V~R~ 330 (684)
+.+|.+|. ++|++.| |++||+|++|||..+...+++++..+++. ++..|.|+|+..
T Consensus 40 ~~~I~~V~~gSpA~~AG-L~~GD~I~~Ing~~v~~~s~~dv~~~i~~~~~~g~~v~LLV~~~ 100 (101)
T 3qik_A 40 AVVVKSVQRGSLAEVAG-LQVGRKIYSINEDLVFLRPFSEVESILNQSFCSRRPLRLLVATK 100 (101)
T ss_dssp EEEEEEECTTSHHHHHT-CCTTCBEEEETTEESTTSCHHHHHHHHHHHHHTTCCEEEEEECC
T ss_pred CeEEEEECCCCHHHHcC-CCCCCEEEEECCEEcCcCCHHHHHHHHHHhhccCCeEEEEEecC
Confidence 45666665 5676666 99999999999999988899999999987 588999999753
No 335
>1x5n_A Harmonin; PDZ domain, usher syndrome 1C protein, autoimmune enteropathy-related antigen AIE-75 ,antigen NY-CO-38/NY-CO- 37, PDZ-73 protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2kbs_A
Probab=97.98 E-value=8.8e-06 Score=72.32 Aligned_cols=58 Identities=24% Similarity=0.474 Sum_probs=50.2
Q ss_pred CCcEEEecc--hhhhhcCCCCCCCEEEEECCEecCCCCHHHHHHHHHhCCCeEEEEEEeC-Cc
Q psy2533 273 PERFYQNLS--VYRNQNGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGPIVTLEIAKQ-GA 332 (684)
Q Consensus 273 ~GIFV~sI~--GaAardGrLr~GDqIL~VNG~sl~g~Th~eAv~lLk~sg~~VtL~V~R~-~~ 332 (684)
.|++|..|. ++|++.| |++||+|++|||+.+.++++.+++.+++.. ..+.|.|.|. +.
T Consensus 41 ~gv~V~~V~~~s~A~~aG-L~~GD~Il~vng~~v~~~~~~~~~~~~~~~-~~v~l~v~r~~g~ 101 (114)
T 1x5n_A 41 PGIFISHVKPGSLSAEVG-LEIGDQIVEVNGVDFSNLDHKEAVNVLKSS-RSLTISIVAAAGR 101 (114)
T ss_dssp CSEEEEEECTTSTTTTTT-CCTTCEEEEETTEETTSCCTTHHHHHHHHC-SSEEEEECSSTTT
T ss_pred CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHhcC-CeEEEEEEcCCCC
Confidence 478898887 6777776 999999999999999999998899999876 6899999887 43
No 336
>2p3w_A Probable serine protease HTRA3; PDZ domain, phage derived high affinity ligand, protein BIND; 1.70A {Homo sapiens}
Probab=97.92 E-value=1.2e-05 Score=71.23 Aligned_cols=59 Identities=29% Similarity=0.514 Sum_probs=50.8
Q ss_pred ccEEEEEecCCChhcccCccccCCeeeecCCeecCCCCHHHHHHHHHcCCCEEEEEEEecCcc
Q psy2533 119 LGIYIKSVVKGGAADANGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGPIVTLEIAKQGAI 181 (684)
Q Consensus 119 ~gIfIs~V~pGGpA~r~GrLqvGDrILaVNG~sl~g~sh~eAV~lLk~sg~~V~LvV~R~~~~ 181 (684)
.+++|..|.+++||+++| |++||+|++|||.++.+ ..+....|+ .+..+.|.|.|....
T Consensus 35 ~gv~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~--~~~~~~~l~-~g~~v~l~v~R~g~~ 93 (112)
T 2p3w_A 35 SGIYVQEVAPNSPSQRGG-IQDGDIIVKVNGRPLVD--SSELQEAVL-TESPLLLEVRRGNDD 93 (112)
T ss_dssp SSEEEEEECTTSHHHHHT-CCTTCEEEEETTEECCS--HHHHHHHHH-HCSSEEEEEEETTEE
T ss_pred CCeEEEEECCCChHHHCC-CCCCCEEEEECCEECCC--HHHHHHHHh-CCCeEEEEEEECCEE
Confidence 579999999999999999 99999999999999975 567777774 467899999987643
No 337
>2zpm_A Regulator of sigma E protease; metalloproteinase, membrane protein, PDZ domain, hydrolase, inner membrane, membrane, metal-binding; HET: MLY MSE; 0.98A {Escherichia coli} PDB: 3id2_A 3id3_A 3id4_A
Probab=97.91 E-value=9.2e-06 Score=69.10 Aligned_cols=59 Identities=34% Similarity=0.463 Sum_probs=49.7
Q ss_pred cEEEEEecCCChhcccCccccCCeeeecCCeecCCCCHHHHHHHHHcC-CCEEEEEEEecCcc
Q psy2533 120 GIYIKSVVKGGAADANGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRT-GPIVTLEIAKQGAI 181 (684)
Q Consensus 120 gIfIs~V~pGGpA~r~GrLqvGDrILaVNG~sl~g~sh~eAV~lLk~s-g~~V~LvV~R~~~~ 181 (684)
+++|..|.+++||+++| |++||+|++|||..+.+ ..+...+|... +..+.|+|.|....
T Consensus 5 ~~~V~~v~~~spA~~aG-l~~GD~I~~ing~~v~~--~~~~~~~l~~~~g~~v~l~v~R~g~~ 64 (91)
T 2zpm_A 5 EPVLENVQPNSAASXAG-LQAGDRIVXVDGQPLTQ--WVTFVMLVRDNPGXSLALEIERQGSP 64 (91)
T ss_dssp -CBCSEECTTSHHHHTT-CCTTCEEEEETTEECCC--HHHHHHHHHHCTTCCEEEEEEETTEE
T ss_pred CeEEEEECCCChHHhcC-CCCCCEEEEECCeEcCC--HHHHHHHHhcCCCCeEEEEEEECCeE
Confidence 46788999999999999 99999999999999975 57777777754 67899999987643
No 338
>2i6v_A General secretion pathway protein C; EPSC, GSPC, PDZ domain, type 2 secretion system, protein transport, membrane protein; 1.63A {Vibrio cholerae} SCOP: b.36.1.5
Probab=97.86 E-value=1.1e-05 Score=68.76 Aligned_cols=58 Identities=17% Similarity=0.260 Sum_probs=48.8
Q ss_pred cEEEEEecCCChhcccCccccCCeeeecCCeecCCCCHHHHHHHHHc--CCCEEEEEEEecCc
Q psy2533 120 GIYIKSVVKGGAADANGRLQAGDQLLKVDGQSLVGITQEKAAEYLVR--TGPIVTLEIAKQGA 180 (684)
Q Consensus 120 gIfIs~V~pGGpA~r~GrLqvGDrILaVNG~sl~g~sh~eAV~lLk~--sg~~V~LvV~R~~~ 180 (684)
|+.|..+.|++||+++| |++||+|++|||.++.+ ..+...++.. .+..+.|+|.|...
T Consensus 20 G~~V~~~~~~s~A~~aG-l~~GD~I~~ing~~v~~--~~d~~~~~~~~~~g~~v~l~v~R~g~ 79 (87)
T 2i6v_A 20 GYRVSPGKDPVLFESIG-LQDGDMAVALNGLDLTD--PNVMNTLFQSMNEMTEMSLTVERDGQ 79 (87)
T ss_dssp EEEEEECSCHHHHHHTT-CCTTCEEEEETTEETTC--HHHHHHHHHTGGGCSEEEEEEEETTE
T ss_pred EEEEEeCCCCCHHHHCC-CCCCCEEEEECCEECCC--HHHHHHHHHhcCCCCEEEEEEEECCE
Confidence 67888899999999999 99999999999999976 4566666764 36789999998764
No 339
>3kzd_A TIAM-1, T-lymphoma invasion and metastasis-inducing prote; PDZ, cell junction, cell adhesion, signaling protein, nucleotide exchange factor; 1.30A {Homo sapiens} PDB: 3kze_A
Probab=97.85 E-value=3.3e-05 Score=68.06 Aligned_cols=54 Identities=17% Similarity=0.418 Sum_probs=46.1
Q ss_pred CCcEEEecc--hhhhhcCCCCCCCEEEEECCEecCCCCHHHHHHHHHhCCCeEEEEEEe
Q psy2533 273 PERFYQNLS--VYRNQNGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGPIVTLEIAK 329 (684)
Q Consensus 273 ~GIFV~sI~--GaAardGrLr~GDqIL~VNG~sl~g~Th~eAv~lLk~sg~~VtL~V~R 329 (684)
.|+||..+. ++|++.| |++||+|++|||+.+.+++++++..+++. ..++|.|..
T Consensus 35 ~g~~V~~V~~~spA~~aG-L~~GD~Il~vng~~v~~~~~~~l~~~l~~--~~l~ltV~~ 90 (94)
T 3kzd_A 35 RRLYVNSVKETGLASKKG-LKAGDEILEINNRAADALNSSMLKDFLSQ--PSLGLLVRT 90 (94)
T ss_dssp CEEEEEEECTTSHHHHTT-CCTTCEEEEETTEEGGGCCHHHHHHHHHS--SEEEEEEEE
T ss_pred CCeEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHhC--CeEEEEEEe
Confidence 478898887 6777766 99999999999999999999999999974 467887764
No 340
>2yub_A LIMK-2, LIM domain kinase 2; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=97.84 E-value=2.1e-05 Score=71.41 Aligned_cols=61 Identities=16% Similarity=0.311 Sum_probs=51.6
Q ss_pred CCCcEEEecc----hhhhhcCCCCCCCEEEEECCEecCCCCHHHHHHHHHhCCCeEEEEEEeCCcc
Q psy2533 272 DPERFYQNLS----VYRNQNGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGPIVTLEIAKQGAI 333 (684)
Q Consensus 272 d~GIFV~sI~----GaAardGrLr~GDqIL~VNG~sl~g~Th~eAv~lLk~sg~~VtL~V~R~~~~ 333 (684)
..|++|..|. ++|++.| |++||+|++|||..+.+++|.++..+|+..+..|.|.|.|.+..
T Consensus 43 ~~gv~V~~V~~~~~spA~~aG-L~~GD~Il~Vng~~v~~~~~~dl~~~l~~~g~~v~l~v~R~g~~ 107 (118)
T 2yub_A 43 ATTVQVKEVNRMHISPNNRNA-IHPGDRILEINGTPVRTLRVEEVEDAIKQTSQTLQLLIEHDPVP 107 (118)
T ss_dssp CCEEEEEECCTTTSCTTHHHH-CCTTCCEEEESSSBTTTSCHHHHHHHHHCCSSCEEEEEEECSSC
T ss_pred CCcEEEEEecCCCCChHHHcC-CCCCCEEEEECCEECCCcCHHHHHHHHHhCCCEEEEEEEECCEE
Confidence 3577888874 4677765 99999999999999999999999999988777899999987643
No 341
>4fgm_A Aminopeptidase N family protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, peptidase_M61, PDZ; 2.39A {Idiomarina loihiensis L2TR}
Probab=97.84 E-value=2.7e-05 Score=88.62 Aligned_cols=74 Identities=20% Similarity=0.290 Sum_probs=58.9
Q ss_pred CCCcccEEEEeccCCCCCcccEEEEEecCCChhcccCccccCCeeeecCCeecCCCCHHHHHHHHHc--CCCEEEEEEEe
Q psy2533 100 LRQEAKLSEMSEEGAGQDRLGIYIKSVVKGGAADANGRLQAGDQLLKVDGQSLVGITQEKAAEYLVR--TGPIVTLEIAK 177 (684)
Q Consensus 100 ~~~GLGfsI~GG~~~~~~~~gIfIs~V~pGGpA~r~GrLqvGDrILaVNG~sl~g~sh~eAV~lLk~--sg~~V~LvV~R 177 (684)
...+||+.+.... .+++|..|.+||||+++| |++||+|++|||..+.. .+...+|+. .+..|.|+|.|
T Consensus 483 ~~~~lG~~~~~~~------~gv~V~~V~~~spA~~AG-L~~GD~I~aInG~~v~~---~~l~~~l~~~~~g~~v~l~v~R 552 (597)
T 4fgm_A 483 ARVNFGAKYKASP------QGLDVLNVYHDESAYHAG-LSAGDKIIAIDHLQATE---QSVKRILERYIPGDTVTIHAFR 552 (597)
T ss_dssp CSCCCSEEEEEET------TEEEEEEECTTSHHHHHT-CCTTCEEEEETTEECCT---TTHHHHHTTCCTTCEEEEEEEE
T ss_pred CccccceEEeccC------CeEEEEEeCCCChHHHCC-CCCCCEEEEECCEECCH---HHHHHHHHhcCCCCEEEEEEEE
Confidence 3468999886532 279999999999999999 99999999999999953 334455543 57899999999
Q ss_pred cCcccc
Q psy2533 178 QGAIYH 183 (684)
Q Consensus 178 ~~~~~~ 183 (684)
++....
T Consensus 553 ~g~~~~ 558 (597)
T 4fgm_A 553 RDELMT 558 (597)
T ss_dssp TTEEEE
T ss_pred CCEEEE
Confidence 876543
No 342
>3id1_A Regulator of sigma E protease; hydrolase, cell inner membrane, cell membrane, membrane, metal-binding, metalloprotease, transmembrane; 1.67A {Escherichia coli k-12} PDB: 2zpl_A
Probab=97.81 E-value=3.1e-05 Score=67.40 Aligned_cols=56 Identities=21% Similarity=0.292 Sum_probs=47.9
Q ss_pred EEEEecCCChhcccCccccCCeeeecCCeecCCCCHHHHHHHHHcC-C-CEEEEEEEecCc
Q psy2533 122 YIKSVVKGGAADANGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRT-G-PIVTLEIAKQGA 180 (684)
Q Consensus 122 fIs~V~pGGpA~r~GrLqvGDrILaVNG~sl~g~sh~eAV~lLk~s-g-~~V~LvV~R~~~ 180 (684)
+|..|.++|||+++| |++||+|++|||..+.+ ..++...|... + ..|.|+|.|...
T Consensus 5 ~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~--~~d~~~~l~~~~~~~~v~l~v~R~g~ 62 (95)
T 3id1_A 5 VVGEIAANSIAAEAQ-IAPGTELKAVDGIETPD--WDAVRLQLVDKIGDESTTITVAPFGS 62 (95)
T ss_dssp BEEEECTTSHHHHTT-CCTTCEEEEETTEECSS--HHHHHHHHHHTTTCSEEEEEEECTTC
T ss_pred EEEeeCCCCHHHHcC-CCCCCEEEEECCEECCC--HHHHHHHHHHhcCCCcEEEEEEECCC
Confidence 678899999999999 99999999999999976 56777777654 3 689999999864
No 343
>2i4s_A General secretion pathway protein C; EPSC, GSPC, PDZ domain, type 2 secretion system, protein transport, membrane protein; 1.92A {Vibrio cholerae} SCOP: b.36.1.5
Probab=97.76 E-value=4.4e-05 Score=67.29 Aligned_cols=58 Identities=17% Similarity=0.247 Sum_probs=47.3
Q ss_pred cEEEEEecCCChhcccCccccCCeeeecCCeecCCCCHHHHHHHHH--cCCCEEEEEEEecCc
Q psy2533 120 GIYIKSVVKGGAADANGRLQAGDQLLKVDGQSLVGITQEKAAEYLV--RTGPIVTLEIAKQGA 180 (684)
Q Consensus 120 gIfIs~V~pGGpA~r~GrLqvGDrILaVNG~sl~g~sh~eAV~lLk--~sg~~V~LvV~R~~~ 180 (684)
|++|..+.|++||++.| |++||+|++|||.++.+.. +...++. ..+..+.|+|.|...
T Consensus 38 G~~V~~~~pas~A~~aG-l~~GDvI~~ing~~v~~~~--d~~~~~~~~~~g~~v~l~v~R~g~ 97 (105)
T 2i4s_A 38 GYRVSPGKDPVLFESIG-LQDGDMAVALNGLDLTDPN--VMNTLFQSMNEMTEMSLTVERDGQ 97 (105)
T ss_dssp EEEEEECSCTHHHHHHT-CCTTCEEEEETTEETTSTT--HHHHHHHHHTTCSEEEEEEEETTE
T ss_pred EEEEecCCCCCHHHHcC-CCCCCEEEEECCEECCCHH--HHHHHHHhcCCCCeEEEEEEECCE
Confidence 57788888888889999 9999999999999998764 3445555 347789999998764
No 344
>1y8t_A Hypothetical protein RV0983; serine protease, structural genomics, PSI, protein structure initiative; 2.00A {Mycobacterium tuberculosis} SCOP: b.36.1.4 b.47.1.1 PDB: 2z9i_A
Probab=97.76 E-value=3.7e-05 Score=80.32 Aligned_cols=60 Identities=30% Similarity=0.431 Sum_probs=51.4
Q ss_pred ccEEEEEecCCChhcccCccccCCeeeecCCeecCCCCHHHHHHHHHc--CCCEEEEEEEe-cCcc
Q psy2533 119 LGIYIKSVVKGGAADANGRLQAGDQLLKVDGQSLVGITQEKAAEYLVR--TGPIVTLEIAK-QGAI 181 (684)
Q Consensus 119 ~gIfIs~V~pGGpA~r~GrLqvGDrILaVNG~sl~g~sh~eAV~lLk~--sg~~V~LvV~R-~~~~ 181 (684)
.+++|..|.+++||+++| |++||+|++|||.++.+. .+...+|.. .+..|.|+|.| ....
T Consensus 242 ~g~~V~~v~~~spA~~aG-l~~GD~I~~ing~~v~~~--~~l~~~l~~~~~g~~v~l~v~R~~g~~ 304 (324)
T 1y8t_A 242 LGAKIVEVVAGGAAANAG-VPKGVVVTKVDDRPINSA--DALVAAVRSKAPGATVALTFQDPSGGS 304 (324)
T ss_dssp SSEEEEEECTTSTTTTTT-CCTTCEEEEETTEECCSH--HHHHHHHHTSCTTCEEEEEEECSSCCE
T ss_pred CceEEEEECCCChHHHcC-CCCCCEEEEECCEECCCH--HHHHHHHHhcCCCCEEEEEEEECCCCE
Confidence 579999999999999999 999999999999999764 566667754 47899999999 6643
No 345
>3k50_A Putative S41 protease; structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343}
Probab=97.75 E-value=2.2e-05 Score=85.51 Aligned_cols=75 Identities=17% Similarity=0.220 Sum_probs=58.8
Q ss_pred CCcccEEEEeccCCCCCcccEEEEEecCCChhcccCccccCCeeeecCCeecCCCCHHHHHHHHHcCCCEEEEEEEecCc
Q psy2533 101 RQEAKLSEMSEEGAGQDRLGIYIKSVVKGGAADANGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGPIVTLEIAKQGA 180 (684)
Q Consensus 101 ~~GLGfsI~GG~~~~~~~~gIfIs~V~pGGpA~r~GrLqvGDrILaVNG~sl~g~sh~eAV~lLk~sg~~V~LvV~R~~~ 180 (684)
..||||++....+.. ....++|..|.+||||+++| |++||+|++|||.++.++. +..+|+..+..|+|.|.|...
T Consensus 73 ~~G~~~~l~~~~~~~-~~~~~~V~~V~~gsPA~~AG-L~~GD~I~~InG~~v~~~~---~~~~l~~~g~~v~l~v~R~g~ 147 (403)
T 3k50_A 73 SYGFDYTLYKVLDND-TAYNALISYVVPGSPAEEAG-LQRGHWIMMMNGDYITKKV---ESELLQGSTRQLQIGVYKEVV 147 (403)
T ss_dssp BCSEEEEEEECTTCS-SCEEEEEEEECTTSHHHHTT-CCTTCEEEEETTBCBCTTT---GGGGTSCSCEEEEEEEEEEEC
T ss_pred ccceEEEEEEcCCCC-cceeEEEEEeCCCChHHHcC-CCCCCEEEEECCEEccchh---HHHHhhCCCCEEEEEEEeCCc
Confidence 567777776532211 11248899999999999999 9999999999999999885 566676677789999988753
No 346
>2kl1_A YLBL protein; structure genomics, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium; NMR {Geobacillus thermodenitrificans}
Probab=97.71 E-value=4.1e-05 Score=66.39 Aligned_cols=59 Identities=19% Similarity=0.296 Sum_probs=47.5
Q ss_pred CCCcEEEecc--hhhhhcCCCCCCCEEEEECCEecCCCCHHHHHHHHHhC--CCeEEEEEEeCCccc
Q psy2533 272 DPERFYQNLS--VYRNQNGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRT--GPIVTLEIAKQGAIY 334 (684)
Q Consensus 272 d~GIFV~sI~--GaAardGrLr~GDqIL~VNG~sl~g~Th~eAv~lLk~s--g~~VtL~V~R~~~~~ 334 (684)
..|++|..|. ++|++ | |++||+|++|||..+.++ .+...+|... +..+.|.|.|.+...
T Consensus 4 ~~Gv~V~~V~~~spA~~-G-L~~GD~Il~InG~~v~~~--~~l~~~l~~~~~g~~v~l~v~R~g~~~ 66 (94)
T 2kl1_A 4 AKGVYVMSVLPNMPAAG-R-LEAGDRIAAIDGQPINTS--EQIVSYVREKQAGDRVRVTFIRDRKQH 66 (94)
T ss_dssp CCCEECCCCCTTSTTBT-T-BCTTCEEEEETTBCCCCH--HHHHHHHHHSCTTCCEEEEEEETTEEE
T ss_pred CCcEEEEEECCCChHHh-C-CCCCCEEEEECCEECCCH--HHHHHHHHhCCCCCEEEEEEEECCEEE
Confidence 4578888886 67777 5 999999999999999764 5777778764 789999999987543
No 347
>4a8c_A Periplasmic PH-dependent serine endoprotease DEGQ; chaperone, hydrolase; 7.50A {Escherichia coli} PDB: 4a8a_A 4a8b_A 4a9g_A
Probab=97.68 E-value=7.8e-05 Score=81.48 Aligned_cols=60 Identities=28% Similarity=0.413 Sum_probs=54.7
Q ss_pred ccEEEEEecCCChhcccCccccCCeeeecCCeecCCCCHHHHHHHHHcCCCEEEEEEEecCcc
Q psy2533 119 LGIYIKSVVKGGAADANGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGPIVTLEIAKQGAI 181 (684)
Q Consensus 119 ~gIfIs~V~pGGpA~r~GrLqvGDrILaVNG~sl~g~sh~eAV~lLk~sg~~V~LvV~R~~~~ 181 (684)
.|++|..|.+++||+++| |++||+|++|||.++.+ ..+.+.+|+..+..+.|+|.|....
T Consensus 363 ~gv~V~~V~~~spA~~aG-L~~GD~I~~vng~~v~~--~~~~~~~l~~~~~~v~l~v~R~g~~ 422 (436)
T 4a8c_A 363 KGIKIDEVVKGSPAAQAG-LQKDDVIIGVNRDRVNS--IAEMRKVLAAKPAIIALQIVRGNES 422 (436)
T ss_pred CCEEEEEeCCCCHHHHcC-CCCCCEEEEECCEECCC--HHHHHHHHHhCCCeEEEEEEECCEE
Confidence 489999999999999999 99999999999999975 6889999998888999999998754
No 348
>3stj_A Protease DEGQ; serine protease, PDZ domain, protease, chaperone, DEGP, DEGQ hydrolase; 2.60A {Escherichia coli}
Probab=97.68 E-value=5.5e-05 Score=80.43 Aligned_cols=62 Identities=21% Similarity=0.434 Sum_probs=53.7
Q ss_pred ccEEEEEecCCChhcccCccccCCeeeecCCeecCCCCHHHHHHHHHc--CCCEEEEEEEecCcccc
Q psy2533 119 LGIYIKSVVKGGAADANGRLQAGDQLLKVDGQSLVGITQEKAAEYLVR--TGPIVTLEIAKQGAIYH 183 (684)
Q Consensus 119 ~gIfIs~V~pGGpA~r~GrLqvGDrILaVNG~sl~g~sh~eAV~lLk~--sg~~V~LvV~R~~~~~~ 183 (684)
.|++|..|.++|||+++| |++||+|++|||..+.+ ..+...+|.. .+..|.|+|.|......
T Consensus 263 ~G~~V~~V~~~spA~~aG-L~~GDvI~~ing~~v~~--~~~l~~~l~~~~~g~~v~l~v~R~g~~~~ 326 (345)
T 3stj_A 263 RGAFVSEVLPGSGSAKAG-VKAGDIITSLNGKPLNS--FAELRSRIATTEPGTKVKLGLLRNGKPLE 326 (345)
T ss_dssp SSEEEEEECTTSHHHHHT-CCTTCEECEETTEECSC--HHHHHHHHHTSCTTCEEEEEEEETTEEEE
T ss_pred ceEEEEEeccCChHHHcC-CCCCCEEEEECCEECCC--HHHHHHHHHhcCCCCEEEEEEEECCEEEE
Confidence 578999999999999999 99999999999999975 5677777765 58899999999876543
No 349
>1te0_A Protease DEGS; two domains, serine protease, PDZ, alpha-beta protein, hydro; 2.20A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3gdv_A* 3gcn_A* 3gds_A* 3gdu_A* 3gco_A* 1sot_A 1soz_A 1vcw_A 2r3y_A
Probab=97.66 E-value=8.2e-05 Score=77.69 Aligned_cols=61 Identities=18% Similarity=0.411 Sum_probs=53.1
Q ss_pred ccEEEEEecCCChhcccCccccCCeeeecCCeecCCCCHHHHHHHHHc--CCCEEEEEEEecCccc
Q psy2533 119 LGIYIKSVVKGGAADANGRLQAGDQLLKVDGQSLVGITQEKAAEYLVR--TGPIVTLEIAKQGAIY 182 (684)
Q Consensus 119 ~gIfIs~V~pGGpA~r~GrLqvGDrILaVNG~sl~g~sh~eAV~lLk~--sg~~V~LvV~R~~~~~ 182 (684)
.+++|..|.+++||+++| |++||+|++|||.++.+ ..+...+|+. .+..|.|+|.|.....
T Consensus 244 ~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~--~~~l~~~l~~~~~g~~v~l~v~R~g~~~ 306 (318)
T 1te0_A 244 QGIVVNEVSPDGPAANAG-IQVNDLIISVDNKPAIS--ALETMDQVAEIRPGSVIPVVVMRDDKQL 306 (318)
T ss_dssp CCEEEEEECTTSTTTTTC-CCTTCCEEEETTEECCC--HHHHHHHHHTSCTTCEEEEEEESSSCEE
T ss_pred CcEEEEEeCCCChHHHCC-CCCCCEEEEECCEEcCC--HHHHHHHHHhcCCCCEEEEEEEECCEEE
Confidence 579999999999999999 99999999999999976 4677777875 5789999999987543
No 350
>2pzd_A Serine protease HTRA2; PDZ domain, apoptosis, mitochondria, peptid module, hydrolase; 2.75A {Homo sapiens} SCOP: b.36.1.4
Probab=97.64 E-value=0.00015 Score=64.25 Aligned_cols=59 Identities=15% Similarity=0.232 Sum_probs=48.9
Q ss_pred CCCcEEEecc--hhhhhcCCCCCCCEEEEECCEecCCCCHHHHHHHHHhCCCeEEEEEEeCCccc
Q psy2533 272 DPERFYQNLS--VYRNQNGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGPIVTLEIAKQGAIY 334 (684)
Q Consensus 272 d~GIFV~sI~--GaAardGrLr~GDqIL~VNG~sl~g~Th~eAv~lLk~sg~~VtL~V~R~~~~~ 334 (684)
..|++|..+. ++|++.| |++||+|++|||..+.+ ..+...+|+. +..+.|.|.|.+...
T Consensus 34 ~~gv~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~--~~~~~~~l~~-~~~v~l~v~R~g~~~ 94 (113)
T 2pzd_A 34 QHGVLIHKVILGSPAHRAG-LRPGDVILAIGEQMVQN--AEDVYEAVRT-QSQLAVQIRRGRETL 94 (113)
T ss_dssp SSCEEEEEEBTTSHHHHHT-CCTTCEEEEETTEECCS--HHHHHHHHHH-CSSEEEEEEETTEEE
T ss_pred CCCeEEEEeCCCChHHHcC-CCCCCEEEEECCEECCC--HHHHHHHHhC-CCeEEEEEEECCEEE
Confidence 4688999987 6788776 99999999999999974 5677888876 688999999976543
No 351
>2kjp_A Uncharacterized protein YLBL; mixed alpha-beta protein, cell membrane, hydrolase, membrane, protease, serine protease, transmembrane; NMR {Bacillus subtilis}
Probab=97.64 E-value=4e-05 Score=66.41 Aligned_cols=57 Identities=21% Similarity=0.396 Sum_probs=45.0
Q ss_pred CcEEEecc--hhhhhcCCCCCCCEEEEECCEecCCCCHHHHHHHHHhC--CCeEEEEEEeCCccc
Q psy2533 274 ERFYQNLS--VYRNQNGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRT--GPIVTLEIAKQGAIY 334 (684)
Q Consensus 274 GIFV~sI~--GaAardGrLr~GDqIL~VNG~sl~g~Th~eAv~lLk~s--g~~VtL~V~R~~~~~ 334 (684)
|++|..|. ++|++ | |++||+|++|||..+.++ .+...+|... +..|+|.|.|.+...
T Consensus 2 Gv~V~~V~~~spA~~-G-L~~GD~I~~InG~~v~~~--~~l~~~l~~~~~g~~v~l~v~R~g~~~ 62 (91)
T 2kjp_A 2 GIYASSVVENMPAKG-K-IEVGDKIISADGKNYQSA--EKLIDYISSKKAGDKVTLKIEREEKEK 62 (91)
T ss_dssp CSSCCCCCCSSCCSS-C-CCSSCEEEEETTBCCSSH--HHHHHHHSSCCSSCEECEEEESSSCEE
T ss_pred ceEEEEECCCChHHH-c-CCCCCEEEEECCEECCCH--HHHHHHHHcCCCCCEEEEEEEECCEEE
Confidence 45666665 67777 5 999999999999999754 6788888764 788999999977543
No 352
>3rle_A Golgi reassembly-stacking protein 2; PDZ, tether, golgin, membrane protein; 1.65A {Homo sapiens} PDB: 4edj_A
Probab=97.64 E-value=5.1e-05 Score=74.82 Aligned_cols=74 Identities=14% Similarity=0.055 Sum_probs=56.9
Q ss_pred CcccEEEEeccCCCCCcccEEEEEecCCChhcccCcccc-CCeeeecCCeecCCCCHHHHHHHHHcC-CCEEEEEEEecC
Q psy2533 102 QEAKLSEMSEEGAGQDRLGIYIKSVVKGGAADANGRLQA-GDQLLKVDGQSLVGITQEKAAEYLVRT-GPIVTLEIAKQG 179 (684)
Q Consensus 102 ~GLGfsI~GG~~~~~~~~gIfIs~V~pGGpA~r~GrLqv-GDrILaVNG~sl~g~sh~eAV~lLk~s-g~~V~LvV~R~~ 179 (684)
..||+++..-........|++|..|.++|||+++| |++ ||+|++|||. +.+ ..+...+|+.. +..|.|.|.|..
T Consensus 95 ~~lGi~~~~~~~~~~~~~Gv~V~~V~~~spA~~aG-l~~~GD~I~~ing~-v~~--~~~l~~~l~~~~g~~v~l~v~r~~ 170 (209)
T 3rle_A 95 GLLGVSIRFCSFDGANENVWHVLEVESNSPAALAG-LRPHSDYIIGADTV-MNE--SEDLFSLIETHEAKPLKLYVYNTD 170 (209)
T ss_dssp SSSCEEEEEEECTTGGGSCEEEEEECTTSHHHHHT-CCTTTEEEEEESSC-CCS--SSCHHHHHHHTTTSCEEEEEEETT
T ss_pred CccceEEeecChhHccccceEEEEeCCCChHHHCC-CCCCCCEEEECCCE-eCC--HHHHHHHHHhCCCCeEEEEEEECC
Confidence 46898887422111122589999999999999999 999 9999999997 644 45667777765 778999998865
No 353
>3pv2_A DEGQ; trypsin fold, PDZ domain, chaperone protease, hydrolase; 2.15A {Legionella fallonii} PDB: 3pv3_A 3pv5_A 3pv4_A
Probab=97.47 E-value=9e-05 Score=81.50 Aligned_cols=60 Identities=8% Similarity=0.210 Sum_probs=54.3
Q ss_pred ccEEEEEecCCChhcccCccccCCeeeecCCeecCCCCHHHHHHHHHcCCCEEEEEEEecCcc
Q psy2533 119 LGIYIKSVVKGGAADANGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGPIVTLEIAKQGAI 181 (684)
Q Consensus 119 ~gIfIs~V~pGGpA~r~GrLqvGDrILaVNG~sl~g~sh~eAV~lLk~sg~~V~LvV~R~~~~ 181 (684)
.|++|..|.++|||+++| |++||+|++|||.++.+ ..+...+|+..+..+.|.|.|....
T Consensus 386 ~Gv~V~~V~~gspA~~aG-L~~GD~I~~Vng~~v~~--~~~~~~~l~~~~~~v~l~v~R~g~~ 445 (451)
T 3pv2_A 386 IGVQVVGASENSAGWRAG-IRPGDIIISANKKPVTD--VKSLQTIAQEKKKELLVQVLRGPGS 445 (451)
T ss_dssp EEEEEEEECTTSHHHHHT-CCTTCEEEEETTEECCS--HHHHHHHTTSSCSCEEEEEEETTEE
T ss_pred CceEEEEECCCCHHHHcC-CCCCCEEEEECCEECCC--HHHHHHHHhcCCCeEEEEEEECCEE
Confidence 479999999999999999 99999999999999975 5889999998888899999998643
No 354
>3i18_A LMO2051 protein; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.70A {Listeria monocytogenes} PDB: 2kjk_A 3i1e_A
Probab=97.47 E-value=0.00025 Score=61.89 Aligned_cols=59 Identities=17% Similarity=0.286 Sum_probs=47.3
Q ss_pred CCCcEEEecc--hhhhhcCCCCCCCEEEEECCEecCCCCHHHHHHHHHh--CCCeEEEEEEeCCccc
Q psy2533 272 DPERFYQNLS--VYRNQNGRLQAGDQLLKVDGQSLVGITQEKAAEYLVR--TGPIVTLEIAKQGAIY 334 (684)
Q Consensus 272 d~GIFV~sI~--GaAardGrLr~GDqIL~VNG~sl~g~Th~eAv~lLk~--sg~~VtL~V~R~~~~~ 334 (684)
..|++|..+. ++|+ . +|++||+|++|||..+.++ .+...+|.. .+..+.|.|.|.+...
T Consensus 6 ~~Gv~V~~V~~~spA~-~-GL~~GD~I~~Ing~~v~~~--~dl~~~l~~~~~g~~v~l~v~R~g~~~ 68 (100)
T 3i18_A 6 YDGVYVMSVKDDVPAA-D-VLHAGDLITEIDGNAFKSS--QEFIDYIHSKKVGDTVKINYKHGDKNE 68 (100)
T ss_dssp CCCEEEEEECTTSGGG-G-TCCTTCEEEEETTBCCSSH--HHHHHHHHTSCTTCEEEEEEEETTEEE
T ss_pred CCCEEEEEeCCCCchH-H-CCCCCCEEEEECCEECCCH--HHHHHHHHhCCCCCEEEEEEEECCEEE
Confidence 4689999987 6777 4 6999999999999999764 566777765 4678999999977543
No 355
>2hga_A Conserved protein MTH1368; GFT structural genomics, PSI, protein structure initiative; NMR {Methanothermobacterthermautotrophicus} SCOP: b.36.1.6
Probab=97.43 E-value=0.00012 Score=67.19 Aligned_cols=57 Identities=25% Similarity=0.363 Sum_probs=48.3
Q ss_pred ccEEEEEecCCChhcccCccccCCeeeecCCeecCCCCHHHHHHHHHc--CCCEEEEEEEecCc
Q psy2533 119 LGIYIKSVVKGGAADANGRLQAGDQLLKVDGQSLVGITQEKAAEYLVR--TGPIVTLEIAKQGA 180 (684)
Q Consensus 119 ~gIfIs~V~pGGpA~r~GrLqvGDrILaVNG~sl~g~sh~eAV~lLk~--sg~~V~LvV~R~~~ 180 (684)
.+++|..|.+++||+++ |++||+|++|||..+.+ ..+...+|.. .+..|.|+| |...
T Consensus 25 ~gv~V~~V~~~spA~~a--L~~GD~Il~InG~~v~~--~~dl~~~l~~~~~g~~v~l~V-R~g~ 83 (125)
T 2hga_A 25 DGVQIDSVVPGSPASKV--LTPGLVIESINGMPTSN--LTTYSAALKTISVGEVINITT-DQGT 83 (125)
T ss_dssp CCEEEEEECSSSGGGGT--SCTTCEEEEETTEECSS--HHHHHHHHTTCCTTCEEEEEE-TTEE
T ss_pred CceEEEEECCCChHHHh--cCCCCEEEEECCEEcCC--HHHHHHHHHhcCCCCEEEEEE-ECCE
Confidence 47999999999999988 99999999999999976 4667777763 477899999 7654
No 356
>1lcy_A HTRA2 serine protease; apoptosis, PDZ domain, caspase activation, binding, hydrolase; 2.00A {Homo sapiens} SCOP: b.36.1.4 b.47.1.1
Probab=97.41 E-value=0.00018 Score=75.50 Aligned_cols=59 Identities=24% Similarity=0.390 Sum_probs=52.1
Q ss_pred ccEEEEEecCCChhcccCccccCCeeeecCCeecCCCCHHHHHHHHHcCCCEEEEEEEecCcc
Q psy2533 119 LGIYIKSVVKGGAADANGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGPIVTLEIAKQGAI 181 (684)
Q Consensus 119 ~gIfIs~V~pGGpA~r~GrLqvGDrILaVNG~sl~g~sh~eAV~lLk~sg~~V~LvV~R~~~~ 181 (684)
.|++|..|.+++||+++| |++||+|++|||..+.+ ..+...+|+. +..|.|.|.|....
T Consensus 256 ~gv~V~~V~~~spA~~aG-l~~GDvI~~ing~~v~~--~~~l~~~l~~-~~~v~l~v~R~g~~ 314 (325)
T 1lcy_A 256 HGVLIHKVILGSPAHRAG-LRPGDVILAIGEQMVQN--AEDVYEAVRT-QSQLAVQIRRGRET 314 (325)
T ss_dssp SCEEEEEECTTSHHHHHT-CCTTCEEEEETTEECCS--HHHHHHHHTT-CSSEEEEEEETTEE
T ss_pred CCeEEEEeCcCChHHHCC-CCCCCEEEEECCEEcCC--HHHHHHHHhC-CCeEEEEEEECCEE
Confidence 489999999999999999 99999999999999975 5777788876 57899999998754
No 357
>2p3w_A Probable serine protease HTRA3; PDZ domain, phage derived high affinity ligand, protein BIND; 1.70A {Homo sapiens}
Probab=97.37 E-value=0.00039 Score=61.53 Aligned_cols=58 Identities=24% Similarity=0.406 Sum_probs=46.6
Q ss_pred CCCcEEEecc--hhhhhcCCCCCCCEEEEECCEecCCCCHHHHHHHHHhCCCeEEEEEEeCCcc
Q psy2533 272 DPERFYQNLS--VYRNQNGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGPIVTLEIAKQGAI 333 (684)
Q Consensus 272 d~GIFV~sI~--GaAardGrLr~GDqIL~VNG~sl~g~Th~eAv~lLk~sg~~VtL~V~R~~~~ 333 (684)
..|++|..+. ++|++.| |++||+|++|||..+.+ ..+...+|+ .+..+.|.|.|.+..
T Consensus 34 ~~gv~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~--~~~~~~~l~-~g~~v~l~v~R~g~~ 93 (112)
T 2p3w_A 34 SSGIYVQEVAPNSPSQRGG-IQDGDIIVKVNGRPLVD--SSELQEAVL-TESPLLLEVRRGNDD 93 (112)
T ss_dssp CSSEEEEEECTTSHHHHHT-CCTTCEEEEETTEECCS--HHHHHHHHH-HCSSEEEEEEETTEE
T ss_pred CCCeEEEEECCCChHHHCC-CCCCCEEEEECCEECCC--HHHHHHHHh-CCCeEEEEEEECCEE
Confidence 4588998887 6777765 99999999999999975 456666774 478899999997653
No 358
>3qo6_A Protease DO-like 1, chloroplastic; protease, HTRA, PH-sensor, hydrolase, photosynthesis; 2.50A {Arabidopsis thaliana}
Probab=97.37 E-value=0.00013 Score=77.32 Aligned_cols=62 Identities=24% Similarity=0.341 Sum_probs=53.2
Q ss_pred ccEEEEEecCCChhcccCcccc-----------CCeeeecCCeecCCCCHHHHHHHHHc--CCCEEEEEEEecCcccc
Q psy2533 119 LGIYIKSVVKGGAADANGRLQA-----------GDQLLKVDGQSLVGITQEKAAEYLVR--TGPIVTLEIAKQGAIYH 183 (684)
Q Consensus 119 ~gIfIs~V~pGGpA~r~GrLqv-----------GDrILaVNG~sl~g~sh~eAV~lLk~--sg~~V~LvV~R~~~~~~ 183 (684)
.|++|..|.++|||+++| |++ ||+|++|||.++.+. .+...+|.. .++.|+|+|.|......
T Consensus 251 ~Gv~V~~V~~~spA~~AG-l~~~~~~~~~~l~~GDvI~~ing~~v~~~--~dl~~~l~~~~~g~~v~l~v~R~g~~~~ 325 (348)
T 3qo6_A 251 SGVLVLDAPPSGPAGKAG-LQSTKRDGYGRLVLGDIITSVNGTKVSNG--SDLYRILDQCKVGDEVTVEVLRGDHKEK 325 (348)
T ss_dssp SSEEEEECCSSSHHHHHT-CCCCEECSSSCEECCCEECEETTBCCSSS--HHHHHHHTTCCTTCEEEEEEECSSSEEE
T ss_pred ceEEEEEecCCChHHHcC-CccccccccCCCCCCCEEEEECCEEeCCH--HHHHHHHHhCCCcCEEEEEEEECCEEEE
Confidence 589999999999999999 998 999999999999876 667777754 47899999999876543
No 359
>2i6v_A General secretion pathway protein C; EPSC, GSPC, PDZ domain, type 2 secretion system, protein transport, membrane protein; 1.63A {Vibrio cholerae} SCOP: b.36.1.5
Probab=97.32 E-value=0.0003 Score=59.72 Aligned_cols=56 Identities=18% Similarity=0.201 Sum_probs=41.6
Q ss_pred CcEEEecc--hhhhhcCCCCCCCEEEEECCEecCCCCHHHHHHHHHh--CCCeEEEEEEeCCc
Q psy2533 274 ERFYQNLS--VYRNQNGRLQAGDQLLKVDGQSLVGITQEKAAEYLVR--TGPIVTLEIAKQGA 332 (684)
Q Consensus 274 GIFV~sI~--GaAardGrLr~GDqIL~VNG~sl~g~Th~eAv~lLk~--sg~~VtL~V~R~~~ 332 (684)
|+.|..+. ++|++.| |++||+|++|||..+.++ .+...++.. .+..+.|.|.|.+.
T Consensus 20 G~~V~~~~~~s~A~~aG-l~~GD~I~~ing~~v~~~--~d~~~~~~~~~~g~~v~l~v~R~g~ 79 (87)
T 2i6v_A 20 GYRVSPGKDPVLFESIG-LQDGDMAVALNGLDLTDP--NVMNTLFQSMNEMTEMSLTVERDGQ 79 (87)
T ss_dssp EEEEEECSCHHHHHHTT-CCTTCEEEEETTEETTCH--HHHHHHHHTGGGCSEEEEEEEETTE
T ss_pred EEEEEeCCCCCHHHHCC-CCCCCEEEEECCEECCCH--HHHHHHHHhcCCCCEEEEEEEECCE
Confidence 45555555 4566655 999999999999999865 455566654 46789999998764
No 360
>2l97_A HTRA, putative serine protease; HTRA-PDZ, protein binding; NMR {Streptococcus pneumoniae}
Probab=97.29 E-value=0.00062 Score=62.71 Aligned_cols=58 Identities=17% Similarity=0.267 Sum_probs=46.7
Q ss_pred CCCcEEEecc--hhhhhcCCCCCCCEEEEECCEecCCCCHHHHHHHHHh--CCCeEEEEEEeCCcc
Q psy2533 272 DPERFYQNLS--VYRNQNGRLQAGDQLLKVDGQSLVGITQEKAAEYLVR--TGPIVTLEIAKQGAI 333 (684)
Q Consensus 272 d~GIFV~sI~--GaAardGrLr~GDqIL~VNG~sl~g~Th~eAv~lLk~--sg~~VtL~V~R~~~~ 333 (684)
..|++|..|. ++|+ ++|++||+|++|||..+.++ .+...+|.. .++.|+|.|.|.+..
T Consensus 56 ~~g~~V~~V~~~spA~--aGL~~GD~I~~inG~~v~~~--~~l~~~l~~~~~g~~v~l~v~R~g~~ 117 (134)
T 2l97_A 56 TSGVIVRSVQSNMPAN--GHLEKYDVITKVDDKEIASS--TDLQSALYNHSIGDTIKITYYRNGKE 117 (134)
T ss_dssp CSCEEEEECSTTSGGG--TTSCSSCEEEEETTEECCCH--HHHHHHHHHSSTTCEEEEEEEETTEE
T ss_pred CCCEEEEEECCCCchH--HCCCCCCEEEEECCEEcCCH--HHHHHHHHhCCCCCEEEEEEEECCEE
Confidence 4688999987 5666 66999999999999999865 466666766 478999999997754
No 361
>2i4s_A General secretion pathway protein C; EPSC, GSPC, PDZ domain, type 2 secretion system, protein transport, membrane protein; 1.92A {Vibrio cholerae} SCOP: b.36.1.5
Probab=97.20 E-value=0.00094 Score=58.72 Aligned_cols=55 Identities=18% Similarity=0.207 Sum_probs=40.0
Q ss_pred cEEEecc--hhhhhcCCCCCCCEEEEECCEecCCCCHHHHHHHHHh--CCCeEEEEEEeCCc
Q psy2533 275 RFYQNLS--VYRNQNGRLQAGDQLLKVDGQSLVGITQEKAAEYLVR--TGPIVTLEIAKQGA 332 (684)
Q Consensus 275 IFV~sI~--GaAardGrLr~GDqIL~VNG~sl~g~Th~eAv~lLk~--sg~~VtL~V~R~~~ 332 (684)
++|.... ++|++.| |++||+|++|||..+.++. +...++.. .+..+.|.|.|.+.
T Consensus 39 ~~V~~~~pas~A~~aG-l~~GDvI~~ing~~v~~~~--d~~~~~~~~~~g~~v~l~v~R~g~ 97 (105)
T 2i4s_A 39 YRVSPGKDPVLFESIG-LQDGDMAVALNGLDLTDPN--VMNTLFQSMNEMTEMSLTVERDGQ 97 (105)
T ss_dssp EEEEECSCTHHHHHHT-CCTTCEEEEETTEETTSTT--HHHHHHHHHTTCSEEEEEEEETTE
T ss_pred EEEecCCCCCHHHHcC-CCCCCEEEEECCEECCCHH--HHHHHHHhcCCCCeEEEEEEECCE
Confidence 3444443 4556665 9999999999999999876 34445543 56789999999764
No 362
>2zpm_A Regulator of sigma E protease; metalloproteinase, membrane protein, PDZ domain, hydrolase, inner membrane, membrane, metal-binding; HET: MLY MSE; 0.98A {Escherichia coli} PDB: 3id2_A 3id3_A 3id4_A
Probab=97.17 E-value=0.00071 Score=57.29 Aligned_cols=55 Identities=33% Similarity=0.479 Sum_probs=41.7
Q ss_pred EEEecc--hhhhhcCCCCCCCEEEEECCEecCCCCHHHHHHHHHh-CCCeEEEEEEeCCcc
Q psy2533 276 FYQNLS--VYRNQNGRLQAGDQLLKVDGQSLVGITQEKAAEYLVR-TGPIVTLEIAKQGAI 333 (684)
Q Consensus 276 FV~sI~--GaAardGrLr~GDqIL~VNG~sl~g~Th~eAv~lLk~-sg~~VtL~V~R~~~~ 333 (684)
+|..+. ++|++.| |++||+|++|||..+.+ ..+...+|.. .+..+.|.|.|.+..
T Consensus 7 ~V~~v~~~spA~~aG-l~~GD~I~~ing~~v~~--~~~~~~~l~~~~g~~v~l~v~R~g~~ 64 (91)
T 2zpm_A 7 VLENVQPNSAASXAG-LQAGDRIVXVDGQPLTQ--WVTFVMLVRDNPGXSLALEIERQGSP 64 (91)
T ss_dssp BCSEECTTSHHHHTT-CCTTCEEEEETTEECCC--HHHHHHHHHHCTTCCEEEEEEETTEE
T ss_pred EEEEECCCChHHhcC-CCCCCEEEEECCeEcCC--HHHHHHHHhcCCCCeEEEEEEECCeE
Confidence 344444 5666655 99999999999999975 4677777765 467899999997754
No 363
>1fc6_A Photosystem II D1 protease; D1 C-terminal processing protease, serine protease, serine- lysine catalytic DYAD, PDZ domain, photosynthesis; 1.80A {Scenedesmus obliquus} SCOP: b.36.1.3 c.14.1.2 PDB: 1fc9_A 1fc7_A 1fcf_A
Probab=97.06 E-value=0.00094 Score=71.68 Aligned_cols=59 Identities=20% Similarity=0.321 Sum_probs=50.9
Q ss_pred CCcEEEecc--hhhhhcCCCCCCCEEEEECCEecCCCCHHHHHHHHHh-CCCeEEEEEEeCCc
Q psy2533 273 PERFYQNLS--VYRNQNGRLQAGDQLLKVDGQSLVGITQEKAAEYLVR-TGPIVTLEIAKQGA 332 (684)
Q Consensus 273 ~GIFV~sI~--GaAardGrLr~GDqIL~VNG~sl~g~Th~eAv~lLk~-sg~~VtL~V~R~~~ 332 (684)
.+++|..+. ++|++.| |++||+|++|||+++.+++..++..+|+. .+..|+|.|.|.+.
T Consensus 99 ~~~~V~~v~~~spA~~aG-l~~GD~I~~Ing~~v~~~~~~~~~~~l~~~~g~~v~l~v~r~g~ 160 (388)
T 1fc6_A 99 KDVVVLTPAPGGPAEKAG-ARAGDVIVTVDGTAVKGMSLYDVSDLLQGEADSQVEVVLHAPGA 160 (388)
T ss_dssp SCEEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHHCBSTTCEEEEEEEETTE
T ss_pred CcEEEEEeCCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHhcCCCCEEEEEEEeCCC
Confidence 467888887 6777776 99999999999999999998999999875 46789999999875
No 364
>3num_A Serine protease HTRA1; DEGP, hydrolase; 2.75A {Homo sapiens} PDB: 3nzi_A 2ytw_A 2joa_A
Probab=97.05 E-value=9.1e-05 Score=77.78 Aligned_cols=59 Identities=24% Similarity=0.472 Sum_probs=0.0
Q ss_pred ccEEEEEecCCChhcccCccccCCeeeecCCeecCCCCHHHHHHHHHcCCCEEEEEEEecCcc
Q psy2533 119 LGIYIKSVVKGGAADANGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGPIVTLEIAKQGAI 181 (684)
Q Consensus 119 ~gIfIs~V~pGGpA~r~GrLqvGDrILaVNG~sl~g~sh~eAV~lLk~sg~~V~LvV~R~~~~ 181 (684)
.|++|..|.+++||+++| |++||+|++|||..+.+ ..+...+|+. +..|.|+|.|....
T Consensus 254 ~g~~V~~v~~~spA~~aG-l~~GD~I~~ing~~v~~--~~~~~~~l~~-~~~v~l~v~R~g~~ 312 (332)
T 3num_A 254 SGAYIIEVIPDTPAEAGG-LKENDVIISINGQSVVS--ANDVSDVIKR-ESTLNMVVRRGNED 312 (332)
T ss_dssp ---------------------------------------------------------------
T ss_pred CceEEEEeccCCChHHcC-CCCCCEEEEECCEECCC--HHHHHHHHhC-CCeEEEEEEECCEE
Confidence 479999999999999999 99999999999999965 4566677765 77899999997653
No 365
>3id1_A Regulator of sigma E protease; hydrolase, cell inner membrane, cell membrane, membrane, metal-binding, metalloprotease, transmembrane; 1.67A {Escherichia coli k-12} PDB: 2zpl_A
Probab=96.94 E-value=0.0012 Score=57.34 Aligned_cols=54 Identities=20% Similarity=0.283 Sum_probs=40.8
Q ss_pred EEEecc--hhhhhcCCCCCCCEEEEECCEecCCCCHHHHHHHHHhC-C-CeEEEEEEeCCc
Q psy2533 276 FYQNLS--VYRNQNGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRT-G-PIVTLEIAKQGA 332 (684)
Q Consensus 276 FV~sI~--GaAardGrLr~GDqIL~VNG~sl~g~Th~eAv~lLk~s-g-~~VtL~V~R~~~ 332 (684)
+|..|. ++|++.| |++||+|++|||+.+.++ .+....|... + ..|.|.|.|.+.
T Consensus 5 ~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~--~d~~~~l~~~~~~~~v~l~v~R~g~ 62 (95)
T 3id1_A 5 VVGEIAANSIAAEAQ-IAPGTELKAVDGIETPDW--DAVRLQLVDKIGDESTTITVAPFGS 62 (95)
T ss_dssp BEEEECTTSHHHHTT-CCTTCEEEEETTEECSSH--HHHHHHHHHTTTCSEEEEEEECTTC
T ss_pred EEEeeCCCCHHHHcC-CCCCCEEEEECCEECCCH--HHHHHHHHHhcCCCcEEEEEEECCC
Confidence 455554 5666655 999999999999999764 5666666553 3 689999999874
No 366
>1ky9_A Protease DO, DEGP, HTRA; protein quality control, serine protease, trypsin, chaperone, PDZ, ATP-independent, temperature-regulated, periplasm; 2.80A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3ou0_A 4a8d_A 3otp_A 3mh7_A 3mh4_A 3mh5_A* 3mh6_A* 3cs0_A 2zle_A
Probab=96.83 E-value=0.00018 Score=79.10 Aligned_cols=59 Identities=20% Similarity=0.366 Sum_probs=0.0
Q ss_pred ccEEEEEecCCChhcccCccccCCeeeecCCeecCCCCHHHHHHHHHcCCCEEEEEEEecCc
Q psy2533 119 LGIYIKSVVKGGAADANGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGPIVTLEIAKQGA 180 (684)
Q Consensus 119 ~gIfIs~V~pGGpA~r~GrLqvGDrILaVNG~sl~g~sh~eAV~lLk~sg~~V~LvV~R~~~ 180 (684)
.+++|..|.+++||++.| |++||+|++|||..+.+ +.+...+|+.....|.|.|.|...
T Consensus 383 ~gv~V~~V~~gspA~~aG-L~~GDiI~~vng~~v~~--~~~l~~~l~~~~~~v~l~v~R~g~ 441 (448)
T 1ky9_A 383 QGVVVNNVKTGTPAAQIG-LKKGDVIIGANQQAVKN--IAELRKVLDSKPSVLALNIQRGDS 441 (448)
T ss_dssp --------------------------------------------------------------
T ss_pred CeEEEEEecCCCHHHHcC-CCCCCEEEEECCEECCC--HHHHHHHHHcCCCeEEEEEEECCE
Confidence 479999999999999999 99999999999999974 678888888776688999988764
No 367
>3stj_A Protease DEGQ; serine protease, PDZ domain, protease, chaperone, DEGP, DEGQ hydrolase; 2.60A {Escherichia coli}
Probab=96.78 E-value=0.0023 Score=67.91 Aligned_cols=60 Identities=18% Similarity=0.318 Sum_probs=49.2
Q ss_pred CCCcEEEecc--hhhhhcCCCCCCCEEEEECCEecCCCCHHHHHHHHHh--CCCeEEEEEEeCCccc
Q psy2533 272 DPERFYQNLS--VYRNQNGRLQAGDQLLKVDGQSLVGITQEKAAEYLVR--TGPIVTLEIAKQGAIY 334 (684)
Q Consensus 272 d~GIFV~sI~--GaAardGrLr~GDqIL~VNG~sl~g~Th~eAv~lLk~--sg~~VtL~V~R~~~~~ 334 (684)
..|++|..|. ++|++.| |++||+|++|||+.+.+ ..+...+|.. .++.|+|.|.|.+...
T Consensus 262 ~~G~~V~~V~~~spA~~aG-L~~GDvI~~ing~~v~~--~~~l~~~l~~~~~g~~v~l~v~R~g~~~ 325 (345)
T 3stj_A 262 QRGAFVSEVLPGSGSAKAG-VKAGDIITSLNGKPLNS--FAELRSRIATTEPGTKVKLGLLRNGKPL 325 (345)
T ss_dssp CSSEEEEEECTTSHHHHHT-CCTTCEECEETTEECSC--HHHHHHHHHTSCTTCEEEEEEEETTEEE
T ss_pred CceEEEEEeccCChHHHcC-CCCCCEEEEECCEECCC--HHHHHHHHHhcCCCCEEEEEEEECCEEE
Confidence 4789999997 6777766 99999999999999985 4567777765 5789999999987543
No 368
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=96.77 E-value=0.0022 Score=75.88 Aligned_cols=70 Identities=11% Similarity=0.118 Sum_probs=58.1
Q ss_pred CCcccEEEEeccCCCCCcccEEEEEecCC--------ChhcccCc-cccCCeeeecCCeecCCCCHHHHHHHHHc-CCCE
Q psy2533 101 RQEAKLSEMSEEGAGQDRLGIYIKSVVKG--------GAADANGR-LQAGDQLLKVDGQSLVGITQEKAAEYLVR-TGPI 170 (684)
Q Consensus 101 ~~GLGfsI~GG~~~~~~~~gIfIs~V~pG--------GpA~r~Gr-LqvGDrILaVNG~sl~g~sh~eAV~lLk~-sg~~ 170 (684)
..|+|+.+.-- ..+++|..|.+| +||+++|. |+ ||+|++|||.++.++. +++.+|+. .+..
T Consensus 736 ~~g~G~~~~~~------~~~~~v~~v~~~~~~~~~~~spa~~ag~~l~-GD~I~~i~g~~~~~~~--~~~~~~~~~~g~~ 806 (1045)
T 1k32_A 736 SGRIACDFKLD------GDHYVVAKAYAGDYSNEGEKSPIFEYGIDPT-GYLIEDIDGETVGAGS--NIYRVLSEKAGTS 806 (1045)
T ss_dssp CCBCSEEEEEE------TTEEEEEEECBSCTTSTTCBCGGGGGTCCCT-TCEEEEETTEECBTTB--CHHHHHHTTTTSE
T ss_pred cceecEEEEEe------CCEEEEEEecCCCcccccCCChHHHCCCCcC-CCEEEEECCEEccchh--hHHHhhcCCCCCE
Confidence 45889888642 137999999998 99999994 89 9999999999999886 66777775 4788
Q ss_pred EEEEEEecC
Q psy2533 171 VTLEIAKQG 179 (684)
Q Consensus 171 V~LvV~R~~ 179 (684)
|.|+|.|..
T Consensus 807 v~l~v~r~~ 815 (1045)
T 1k32_A 807 ARIRLSGKG 815 (1045)
T ss_dssp EEEEEECSS
T ss_pred EEEEEECCC
Confidence 999999875
No 369
>1te0_A Protease DEGS; two domains, serine protease, PDZ, alpha-beta protein, hydro; 2.20A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3gdv_A* 3gcn_A* 3gds_A* 3gdu_A* 3gco_A* 1sot_A 1soz_A 1vcw_A 2r3y_A
Probab=96.65 E-value=0.0026 Score=66.33 Aligned_cols=60 Identities=12% Similarity=0.237 Sum_probs=48.5
Q ss_pred CCCcEEEecc--hhhhhcCCCCCCCEEEEECCEecCCCCHHHHHHHHHh--CCCeEEEEEEeCCccc
Q psy2533 272 DPERFYQNLS--VYRNQNGRLQAGDQLLKVDGQSLVGITQEKAAEYLVR--TGPIVTLEIAKQGAIY 334 (684)
Q Consensus 272 d~GIFV~sI~--GaAardGrLr~GDqIL~VNG~sl~g~Th~eAv~lLk~--sg~~VtL~V~R~~~~~ 334 (684)
..|++|..|. ++|++.| |++||+|++|||+.+.++ .+...+|+. .++.|.|.|.|.+...
T Consensus 243 ~~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~--~~l~~~l~~~~~g~~v~l~v~R~g~~~ 306 (318)
T 1te0_A 243 LQGIVVNEVSPDGPAANAG-IQVNDLIISVDNKPAISA--LETMDQVAEIRPGSVIPVVVMRDDKQL 306 (318)
T ss_dssp CCCEEEEEECTTSTTTTTC-CCTTCCEEEETTEECCCH--HHHHHHHHTSCTTCEEEEEEESSSCEE
T ss_pred CCcEEEEEeCCCChHHHCC-CCCCCEEEEECCEEcCCH--HHHHHHHHhcCCCCEEEEEEEECCEEE
Confidence 4689999997 6777665 999999999999999764 567777775 5789999999987543
No 370
>2hga_A Conserved protein MTH1368; GFT structural genomics, PSI, protein structure initiative; NMR {Methanothermobacterthermautotrophicus} SCOP: b.36.1.6
Probab=96.61 E-value=0.0017 Score=59.54 Aligned_cols=57 Identities=12% Similarity=0.190 Sum_probs=44.6
Q ss_pred CCCCcEEEecc--hhhhhcCCCCCCCEEEEECCEecCCCCHHHHHHHHHh--CCCeEEEEEEeCCc
Q psy2533 271 ADPERFYQNLS--VYRNQNGRLQAGDQLLKVDGQSLVGITQEKAAEYLVR--TGPIVTLEIAKQGA 332 (684)
Q Consensus 271 ~d~GIFV~sI~--GaAardGrLr~GDqIL~VNG~sl~g~Th~eAv~lLk~--sg~~VtL~V~R~~~ 332 (684)
...|++|..|. ++|++. |++||+|++|||..+.++ .+...+|.. .+..|.|.| |.+.
T Consensus 23 ~~~gv~V~~V~~~spA~~a--L~~GD~Il~InG~~v~~~--~dl~~~l~~~~~g~~v~l~V-R~g~ 83 (125)
T 2hga_A 23 QPDGVQIDSVVPGSPASKV--LTPGLVIESINGMPTSNL--TTYSAALKTISVGEVINITT-DQGT 83 (125)
T ss_dssp CCCCEEEEEECSSSGGGGT--SCTTCEEEEETTEECSSH--HHHHHHHTTCCTTCEEEEEE-TTEE
T ss_pred CCCceEEEEECCCChHHHh--cCCCCEEEEECCEEcCCH--HHHHHHHHhcCCCCEEEEEE-ECCE
Confidence 34678888887 566665 999999999999999865 466666763 477899999 8665
No 371
>1lcy_A HTRA2 serine protease; apoptosis, PDZ domain, caspase activation, binding, hydrolase; 2.00A {Homo sapiens} SCOP: b.36.1.4 b.47.1.1
Probab=96.45 E-value=0.0051 Score=64.42 Aligned_cols=59 Identities=15% Similarity=0.232 Sum_probs=48.0
Q ss_pred CCCcEEEecc--hhhhhcCCCCCCCEEEEECCEecCCCCHHHHHHHHHhCCCeEEEEEEeCCccc
Q psy2533 272 DPERFYQNLS--VYRNQNGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGPIVTLEIAKQGAIY 334 (684)
Q Consensus 272 d~GIFV~sI~--GaAardGrLr~GDqIL~VNG~sl~g~Th~eAv~lLk~sg~~VtL~V~R~~~~~ 334 (684)
..|++|..|. ++|++.| |++||+|++|||+.+.+ ..+...+|+. +..|.|.|.|.+...
T Consensus 255 ~~gv~V~~V~~~spA~~aG-l~~GDvI~~ing~~v~~--~~~l~~~l~~-~~~v~l~v~R~g~~~ 315 (325)
T 1lcy_A 255 QHGVLIHKVILGSPAHRAG-LRPGDVILAIGEQMVQN--AEDVYEAVRT-QSQLAVQIRRGRETL 315 (325)
T ss_dssp SSCEEEEEECTTSHHHHHT-CCTTCEEEEETTEECCS--HHHHHHHHTT-CSSEEEEEEETTEEE
T ss_pred CCCeEEEEeCcCChHHHCC-CCCCCEEEEECCEEcCC--HHHHHHHHhC-CCeEEEEEEECCEEE
Confidence 4689999997 6777766 99999999999999975 4567777765 688999999987543
No 372
>1y8t_A Hypothetical protein RV0983; serine protease, structural genomics, PSI, protein structure initiative; 2.00A {Mycobacterium tuberculosis} SCOP: b.36.1.4 b.47.1.1 PDB: 2z9i_A
Probab=96.27 E-value=0.004 Score=64.87 Aligned_cols=58 Identities=16% Similarity=0.186 Sum_probs=45.9
Q ss_pred CCCcEEEecc--hhhhhcCCCCCCCEEEEECCEecCCCCHHHHHHHHHh--CCCeEEEEEEe-CCc
Q psy2533 272 DPERFYQNLS--VYRNQNGRLQAGDQLLKVDGQSLVGITQEKAAEYLVR--TGPIVTLEIAK-QGA 332 (684)
Q Consensus 272 d~GIFV~sI~--GaAardGrLr~GDqIL~VNG~sl~g~Th~eAv~lLk~--sg~~VtL~V~R-~~~ 332 (684)
..|++|..+. ++|++.| |++||+|++|||+.+.++ .+...+|.. .++.|+|.|.| .+.
T Consensus 241 ~~g~~V~~v~~~spA~~aG-l~~GD~I~~ing~~v~~~--~~l~~~l~~~~~g~~v~l~v~R~~g~ 303 (324)
T 1y8t_A 241 TLGAKIVEVVAGGAAANAG-VPKGVVVTKVDDRPINSA--DALVAAVRSKAPGATVALTFQDPSGG 303 (324)
T ss_dssp SSSEEEEEECTTSTTTTTT-CCTTCEEEEETTEECCSH--HHHHHHHHTSCTTCEEEEEEECSSCC
T ss_pred CCceEEEEECCCChHHHcC-CCCCCEEEEECCEECCCH--HHHHHHHHhcCCCCEEEEEEEECCCC
Confidence 5688998887 5666655 999999999999999865 456666654 47899999999 654
No 373
>4fgm_A Aminopeptidase N family protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, peptidase_M61, PDZ; 2.39A {Idiomarina loihiensis L2TR}
Probab=96.03 E-value=0.0068 Score=69.08 Aligned_cols=58 Identities=21% Similarity=0.270 Sum_probs=44.6
Q ss_pred CCcEEEecc--hhhhhcCCCCCCCEEEEECCEecCCCCHHHHHHHHHh--CCCeEEEEEEeCCccc
Q psy2533 273 PERFYQNLS--VYRNQNGRLQAGDQLLKVDGQSLVGITQEKAAEYLVR--TGPIVTLEIAKQGAIY 334 (684)
Q Consensus 273 ~GIFV~sI~--GaAardGrLr~GDqIL~VNG~sl~g~Th~eAv~lLk~--sg~~VtL~V~R~~~~~ 334 (684)
.|++|..|. |+|++.| |++||+|++|||..+.... ...+|+. .|+.|+|.|.|.+...
T Consensus 496 ~gv~V~~V~~~spA~~AG-L~~GD~I~aInG~~v~~~~---l~~~l~~~~~g~~v~l~v~R~g~~~ 557 (597)
T 4fgm_A 496 QGLDVLNVYHDESAYHAG-LSAGDKIIAIDHLQATEQS---VKRILERYIPGDTVTIHAFRRDELM 557 (597)
T ss_dssp TEEEEEEECTTSHHHHHT-CCTTCEEEEETTEECCTTT---HHHHHTTCCTTCEEEEEEEETTEEE
T ss_pred CeEEEEEeCCCChHHHCC-CCCCCEEEEECCEECCHHH---HHHHHHhcCCCCEEEEEEEECCEEE
Confidence 467888887 6777766 9999999999999995334 3444543 5789999999987644
No 374
>3qo6_A Protease DO-like 1, chloroplastic; protease, HTRA, PH-sensor, hydrolase, photosynthesis; 2.50A {Arabidopsis thaliana}
Probab=95.92 E-value=0.0057 Score=64.66 Aligned_cols=59 Identities=20% Similarity=0.225 Sum_probs=48.5
Q ss_pred CCcEEEecc--hhhhhcCCCCC-----------CCEEEEECCEecCCCCHHHHHHHHHh--CCCeEEEEEEeCCccc
Q psy2533 273 PERFYQNLS--VYRNQNGRLQA-----------GDQLLKVDGQSLVGITQEKAAEYLVR--TGPIVTLEIAKQGAIY 334 (684)
Q Consensus 273 ~GIFV~sI~--GaAardGrLr~-----------GDqIL~VNG~sl~g~Th~eAv~lLk~--sg~~VtL~V~R~~~~~ 334 (684)
.|++|..+. ++|++.| |++ ||+|++|||+.+.++ .+...+|.. .++.|+|.|.|.+...
T Consensus 251 ~Gv~V~~V~~~spA~~AG-l~~~~~~~~~~l~~GDvI~~ing~~v~~~--~dl~~~l~~~~~g~~v~l~v~R~g~~~ 324 (348)
T 3qo6_A 251 SGVLVLDAPPSGPAGKAG-LQSTKRDGYGRLVLGDIITSVNGTKVSNG--SDLYRILDQCKVGDEVTVEVLRGDHKE 324 (348)
T ss_dssp SSEEEEECCSSSHHHHHT-CCCCEECSSSCEECCCEECEETTBCCSSS--HHHHHHHTTCCTTCEEEEEEECSSSEE
T ss_pred ceEEEEEecCCChHHHcC-CccccccccCCCCCCCEEEEECCEEeCCH--HHHHHHHHhCCCcCEEEEEEEECCEEE
Confidence 689999997 7887776 998 999999999999876 466677754 4789999999987543
No 375
>3k50_A Putative S41 protease; structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343}
Probab=95.91 E-value=0.0035 Score=68.23 Aligned_cols=55 Identities=15% Similarity=0.239 Sum_probs=44.5
Q ss_pred CcEEEecc--hhhhhcCCCCCCCEEEEECCEecCCCCHHHHHHHHHhCCCeEEEEEEeCCc
Q psy2533 274 ERFYQNLS--VYRNQNGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGPIVTLEIAKQGA 332 (684)
Q Consensus 274 GIFV~sI~--GaAardGrLr~GDqIL~VNG~sl~g~Th~eAv~lLk~sg~~VtL~V~R~~~ 332 (684)
.++|..|. +||++.| |++||+|++|||..+.++. ...+|+..+..|+|.|.|.+.
T Consensus 91 ~~~V~~V~~gsPA~~AG-L~~GD~I~~InG~~v~~~~---~~~~l~~~g~~v~l~v~R~g~ 147 (403)
T 3k50_A 91 NALISYVVPGSPAEEAG-LQRGHWIMMMNGDYITKKV---ESELLQGSTRQLQIGVYKEVV 147 (403)
T ss_dssp EEEEEEECTTSHHHHTT-CCTTCEEEEETTBCBCTTT---GGGGTSCSCEEEEEEEEEEEC
T ss_pred eEEEEEeCCCChHHHcC-CCCCCEEEEECCEEccchh---HHHHhhCCCCEEEEEEEeCCc
Confidence 35677776 6788776 9999999999999999885 456666667789999999754
No 376
>3num_A Serine protease HTRA1; DEGP, hydrolase; 2.75A {Homo sapiens} PDB: 3nzi_A 2ytw_A 2joa_A
Probab=95.54 E-value=0.0022 Score=67.25 Aligned_cols=58 Identities=14% Similarity=0.300 Sum_probs=0.0
Q ss_pred CCCcEEEecc--hhhhhcCCCCCCCEEEEECCEecCCCCHHHHHHHHHhCCCeEEEEEEeCCcc
Q psy2533 272 DPERFYQNLS--VYRNQNGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGPIVTLEIAKQGAI 333 (684)
Q Consensus 272 d~GIFV~sI~--GaAardGrLr~GDqIL~VNG~sl~g~Th~eAv~lLk~sg~~VtL~V~R~~~~ 333 (684)
..|++|..|. ++|++.| |++||+|++|||+.+.++ .+...+|+. +..|+|.|.|.+..
T Consensus 253 ~~g~~V~~v~~~spA~~aG-l~~GD~I~~ing~~v~~~--~~~~~~l~~-~~~v~l~v~R~g~~ 312 (332)
T 3num_A 253 ISGAYIIEVIPDTPAEAGG-LKENDVIISINGQSVVSA--NDVSDVIKR-ESTLNMVVRRGNED 312 (332)
T ss_dssp ----------------------------------------------------------------
T ss_pred CCceEEEEeccCCChHHcC-CCCCCEEEEECCEECCCH--HHHHHHHhC-CCeEEEEEEECCEE
Confidence 4688999987 5666655 999999999999999754 455666664 77899999997653
No 377
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=94.04 E-value=0.062 Score=63.58 Aligned_cols=56 Identities=13% Similarity=0.153 Sum_probs=44.8
Q ss_pred CCcEEEecc----------hhhhhcC-CCCCCCEEEEECCEecCCCCHHHHHHHHHh-CCCeEEEEEEeCC
Q psy2533 273 PERFYQNLS----------VYRNQNG-RLQAGDQLLKVDGQSLVGITQEKAAEYLVR-TGPIVTLEIAKQG 331 (684)
Q Consensus 273 ~GIFV~sI~----------GaAardG-rLr~GDqIL~VNG~sl~g~Th~eAv~lLk~-sg~~VtL~V~R~~ 331 (684)
.+++|..+. ++|++.| .|+ ||+|++|||+.+.++. +++.+|+. .|..|+|.|.|.+
T Consensus 748 ~~~~v~~v~~~~~~~~~~~spa~~ag~~l~-GD~I~~i~g~~~~~~~--~~~~~~~~~~g~~v~l~v~r~~ 815 (1045)
T 1k32_A 748 DHYVVAKAYAGDYSNEGEKSPIFEYGIDPT-GYLIEDIDGETVGAGS--NIYRVLSEKAGTSARIRLSGKG 815 (1045)
T ss_dssp TEEEEEEECBSCTTSTTCBCGGGGGTCCCT-TCEEEEETTEECBTTB--CHHHHHHTTTTSEEEEEEECSS
T ss_pred CEEEEEEecCCCcccccCCChHHHCCCCcC-CCEEEEECCEEccchh--hHHHhhcCCCCCEEEEEEECCC
Confidence 456777775 4677766 399 9999999999999987 67777776 4678999999976
No 378
>4fln_A Protease DO-like 2, chloroplastic; protease, DEG, PDZ, hydrolase; 2.80A {Arabidopsis thaliana}
Probab=92.57 E-value=0.15 Score=57.53 Aligned_cols=55 Identities=15% Similarity=0.154 Sum_probs=46.6
Q ss_pred cccEEEEEecCCChhcccCccccCCeeeecCCeecCCCCHHHHHHHHHcCCC-EEEEEE
Q psy2533 118 RLGIYIKSVVKGGAADANGRLQAGDQLLKVDGQSLVGITQEKAAEYLVRTGP-IVTLEI 175 (684)
Q Consensus 118 ~~gIfIs~V~pGGpA~r~GrLqvGDrILaVNG~sl~g~sh~eAV~lLk~sg~-~V~LvV 175 (684)
..+++|+.|.|+++|...| ++.||+|++|||+++.++ .+..++|+++.+ .+.|.+
T Consensus 414 ~~gVvvs~V~~~s~a~~~g-~~~gdiI~~vNg~~V~s~--~~l~~~l~~~k~~~l~~~~ 469 (539)
T 4fln_A 414 EQIVILSQVLANEVNIGYE-DMNNQQVLKFNGIPIRNI--HHLAHLIDMCKDKYLVFEF 469 (539)
T ss_dssp CCCEEEEEECCCGGGTTCS-SCCSEEEEEETTEECCSH--HHHHHHHHTCCSSEEEEEE
T ss_pred ceEEEEEEecCCchhhhcC-CCCCCEEEeECCEEcCCH--HHHHHHHHHcCCCeEEEEE
Confidence 3479999999999999999 999999999999999875 667889998855 355554
No 379
>3fxd_A Protein ICMQ; helix bundle, helix-turn-helix, unknown function; 2.10A {Legionella pneumophila} PDB: 3fxe_A
Probab=48.33 E-value=12 Score=30.00 Aligned_cols=22 Identities=41% Similarity=0.638 Sum_probs=18.6
Q ss_pred CccccHHHHHHHHHHHHHHhhh
Q psy2533 459 KDKLTLEEREKALKELDEIINS 480 (684)
Q Consensus 459 ~~~~~~~~~~~~~~~~~~~~~~ 480 (684)
||+||.|.-+..||-|||.|..
T Consensus 2 kd~lt~eq~~aILkaLdeaIe~ 23 (57)
T 3fxd_A 2 KDQLSDEQKETILKALNDAIEK 23 (57)
T ss_dssp --CCCHHHHHHHHHHHHHHHHH
T ss_pred cchhhHHHHHHHHHHHHHHHHc
Confidence 7999999999999999999864
Done!